BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780753|ref|YP_003065166.1| peptide chain release factor 2 [Candidatus Liberibacter asiaticus str. psy62] (355 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|317130277|ref|YP_004096559.1| hypothetical protein Bcell_3587 [Bacillus cellulosilyticus DSM 2522] gi|315475225|gb|ADU31828.1| hypothetical protein Bcell_3587 [Bacillus cellulosilyticus DSM 2522] Length = 366 Score = 311 bits (797), Expect = 8e-83, Method: Composition-based stats. Identities = 172/352 (48%), Positives = 232/352 (65%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++++LN G D + R++ L DP W N A+ ++ E L + +E+ Sbjct: 13 MAKRLNDFRGSLDLEEKETRIAELEELMSDPSFWDNQDNAQKIISENNALKEMVDTYREL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D + EL EE D + + ++ + + + + LLS D N+A LE+H Sbjct: 73 EAEQEDLDVSYELVKEEGDEELAADLHAGIKELGKKFNDFELQLLLSEPYDKNNAILELH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+MLLRMY RWA+ + FK E L+ G+EAG+KS TL+I G NAYG+LK Sbjct: 133 PGAGGTESQDWASMLLRMYQRWADDKGFKVETLDYLPGDEAGVKSVTLMISGHNAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS+ RRHTSF S V P +DD++EIEIS +IDTYRASGAGGQH Sbjct: 193 AEKGVHRLVRISPFDSSGRRHTSFVSCEVMPELDDNVEIEISPDQLKIDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +NTTDSAVRITH+PT VV CQ ERSQ KN+ QA ML+AKL++LE++++++ + Sbjct: 253 INTTDSAVRITHLPTNTVVTCQSERSQIKNREQAMKMLKAKLFQLEIERQQQELDEIRGE 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +++IGWG QIRSYV PY MVKD RTN E + V+DG+LD F+ A L K Sbjct: 313 QSDIGWGSQIRSYVFHPYNMVKDHRTNYETGNTQSVMDGELDPFIDAYLRSK 364 >gi|261420549|ref|YP_003254231.1| hypothetical protein GYMC61_3194 [Geobacillus sp. Y412MC61] gi|297531361|ref|YP_003672636.1| hypothetical protein GC56T3_3133 [Geobacillus sp. C56-T3] gi|319768218|ref|YP_004133719.1| hypothetical protein GYMC52_3223 [Geobacillus sp. Y412MC52] gi|261377006|gb|ACX79749.1| hypothetical protein GYMC61_3194 [Geobacillus sp. Y412MC61] gi|297254613|gb|ADI28059.1| hypothetical protein GC56T3_3133 [Geobacillus sp. C56-T3] gi|317113084|gb|ADU95576.1| hypothetical protein GYMC52_3223 [Geobacillus sp. Y412MC52] Length = 367 Score = 304 bits (778), Expect = 1e-80, Method: Composition-based stats. Identities = 175/353 (49%), Positives = 238/353 (67%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L + G D + R+ L + P+ W + A+ ++ E L + + Sbjct: 13 KMAKRLAEIRGSLDLEAKQARIRELEEQMAAPNFWDDQKAAQAVISEVNALKDLVEEFSS 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +++R + + EL EE D + E + +++ + + + LL+ D N+A LE+ Sbjct: 73 LEERFDNLEVTYELLKEEPDDELQAELVEEAKKLMKDFSEFELQLLLNEPYDQNNAILEL 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA+MLLRMYTRWAEK+ FK E L+ GEEAGIKS TLLIKG NAYG+L Sbjct: 133 HPGAGGTESQDWASMLLRMYTRWAEKKGFKVETLDYLPGEEAGIKSVTLLIKGHNAYGYL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+D++ RRHTSF S V P +DD+IEIEI + +IDTYR+SGAGGQ Sbjct: 193 KAEKGVHRLVRISPFDASGRRHTSFVSCEVVPELDDNIEIEIRPEELKIDTYRSSGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PTG+VV CQ ERSQ KN+ +A NML+AKLY+ +L++++ Sbjct: 253 HVNTTDSAVRITHLPTGIVVTCQSERSQIKNREKAMNMLKAKLYQKKLEEQQAELAELRG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY +VKD RTN+E + V+DG++D F+ A L K Sbjct: 313 EQKEIGWGNQIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDVFIDAYLRAK 365 >gi|83718832|ref|YP_442414.1| peptide chain release factor 2 [Burkholderia thailandensis E264] gi|83652657|gb|ABC36720.1| peptide chain release factor 2, programmed [Burkholderia thailandensis E264] Length = 459 Score = 300 bits (768), Expect = 2e-79, Method: Composition-based stats. Identities = 180/351 (51%), Positives = 252/351 (71%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L R+ L G D+D +RL+ +N + EDP++W + A+ L RE++ L+ ++ + E+ Sbjct: 108 LRRRAGELRGYLDYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLEGVVTTLTEL 167 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L +LA EE+D L T + +++ V +F + S AD N+ ++++ Sbjct: 168 DNDLRDAQDLFDLAREENDEDTLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQ 227 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+L+ Sbjct: 228 AGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGDYAYGYLR 287 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH Sbjct: 288 TETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 347 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++L+E EL+KR+ + ESS Sbjct: 348 INKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESS 407 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KT++GWG QIRSYVL VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 408 KTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTKAVLDGDLDDFISASLKQ 457 >gi|16080582|ref|NP_391409.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis str. 168] gi|6174964|sp|P28367|RF2_BACSU RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|2331287|gb|AAC97534.1| release factor 2 [Bacillus subtilis] gi|2618874|gb|AAC67303.1| putative peptide chain release factor RF-2 [Bacillus subtilis] gi|2636055|emb|CAB15546.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis str. 168] Length = 366 Score = 299 bits (765), Expect = 4e-79, Method: Composition-based stats. Identities = 173/352 (49%), Positives = 232/352 (65%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++ +L G D ++ R++ L+ + DP W + +A+ ++ E L + ++ K++ Sbjct: 13 MASRLADFRGSLDLESKEARIAELDEQMADPEFWNDQQKAQTVINEANGLKDYVNSYKKL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + +L EE D + E L+ + E + + LLS D N+A LE+H Sbjct: 73 NESHEELQMTHDLLKEEPDTDLQLELEKELKSLTKEFNEFELQLLLSEPYDKNNAILELH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDW +MLLRMYTRW E+R FK E L+ G+EAGIKS TLLIKG NAYG+LK Sbjct: 133 PGAGGTESQDWGSMLLRMYTRWGERRGFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS+ RRHTSF S V P +D I+I+I D ++DTYRASGAGGQH Sbjct: 193 AEKGVHRLVRISPFDSSGRRHTSFVSCEVMPEFNDEIDIDIRTEDIKVDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT VVV CQ ERSQ KN+ +A ML+AKLY+ +++++ + Sbjct: 253 VNTTDSAVRITHLPTNVVVTCQTERSQIKNRERAMKMLKAKLYQRRIEEQQAELDEIRGE 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY MVKD RTN E + V+DGD+D F+ A L K Sbjct: 313 QKEIGWGSQIRSYVFHPYSMVKDHRTNTEMGNVQAVMDGDIDTFIDAYLRSK 364 >gi|239828320|ref|YP_002950944.1| hypothetical protein GWCH70_3007 [Geobacillus sp. WCH70] gi|239808613|gb|ACS25678.1| hypothetical protein GWCH70_3007 [Geobacillus sp. WCH70] Length = 367 Score = 299 bits (764), Expect = 5e-79, Method: Composition-based stats. Identities = 175/353 (49%), Positives = 238/353 (67%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L + G D + R+ L + P+ W + A+ ++ E L + + + Sbjct: 13 KMAKRLAEIRGSLDLETKQARIRELEEQMAAPNFWDDQKAAQTVINEANALKDLVGEFQS 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +++R + + EL EE D + QE +++ + + + LL+ D N+A LE+ Sbjct: 73 LEERFENLEVTYELIKEEPDEDLQQELVAEAKKLTKDFSEFELQLLLNEPYDKNNAILEL 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA+MLLRMYTRWAEK+ FK E L+ GEEAG+KS TLLIKG NAYG+L Sbjct: 133 HPGAGGTESQDWASMLLRMYTRWAEKKGFKVETLDYLPGEEAGVKSVTLLIKGHNAYGYL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+D++ RRHTSF S V P +DD IEIEI + ++DTYR+SGAGGQ Sbjct: 193 KAEKGVHRLVRISPFDASGRRHTSFVSCEVMPEMDDDIEIEIRPEEIKVDTYRSSGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG+VV CQ ERSQ KN+ +A NML+AKLY+ +L++++ Sbjct: 253 HVNTTDSAVRITHIPTGIVVTCQSERSQIKNREKAMNMLKAKLYQKKLEEQQAELAEIRG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY +VKD RTN+E + V+DG++D F+ A L K Sbjct: 313 EQKEIGWGNQIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDIFIDAYLRSK 365 >gi|297583381|ref|YP_003699161.1| hypothetical protein Bsel_1077 [Bacillus selenitireducens MLS10] gi|297141838|gb|ADH98595.1| hypothetical protein Bsel_1077 [Bacillus selenitireducens MLS10] Length = 366 Score = 298 bits (763), Expect = 8e-79, Method: Composition-based stats. Identities = 165/352 (46%), Positives = 233/352 (66%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++ +L G D D +++ L + DP W N EA+ ++ E L + +E+ Sbjct: 13 MATRLADFRGSLDLDEKEAQIASLEDRMADPSFWDNQEEAQKVIGEANALKSYAHTYREL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D + L EE+D ++ + ++ ++ + + + LLSG D+N+A LE+H Sbjct: 73 EAAHEDLEVQFGLLEEENDPEMMADLEAGIEDLQKRLNQFELQLLLSGPYDANNAILELH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQD+A+MLLRMYTR+AE+ +K E L+ G+EAG+KS TL I G NAYG LK Sbjct: 133 PGAGGTESQDYASMLLRMYTRFAEQMNWKVETLDYLPGDEAGVKSVTLQITGHNAYGHLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS+ RRHTSF S V P +++ IEI++ + RIDT+R+SGAGGQH Sbjct: 193 AEKGVHRLVRISPFDSSGRRHTSFVSCDVMPELNEDIEIDVKPDELRIDTFRSSGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PT +V CQ ERSQ KN+ +A ML+AKL++LE++++ + A+ Sbjct: 253 VNTTDSAVRMTHLPTNTIVSCQSERSQIKNREKAMKMLKAKLFQLEIERQRQEADEIRGE 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 ++EIGWG QIRSYV PY MVKD RTN E + V+DGDL F+ A L + Sbjct: 313 QSEIGWGSQIRSYVFHPYNMVKDHRTNKETGNTQAVMDGDLMPFIDAYLRSQ 364 >gi|144897340|emb|CAM74204.1| peptide chain release factor 2 [Magnetospirillum gryphiswaldense MSR-1] Length = 372 Score = 298 bits (762), Expect = 9e-79, Method: Composition-based stats. Identities = 213/352 (60%), Positives = 268/352 (76%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + + L +WD+A+ RL LN + EDP+LW + +A+ LMRER LD +S +++ Sbjct: 12 IRKSVALLKRHLNWDDALMRLDELNAQAEDPNLWNDGDKAQKLMRERTQLDTQVSGCRKL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L L+ELA E D + + L+ +K + E+LLSGEAD+ND YLE++ Sbjct: 72 EADLDDMLGLIELADAEGDTDVAADAEAQLRALKDLAGKLELETLLSGEADANDCYLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTE+QDWA MLLRMY+RWAE+ +K E +E GE AGIKSAT+ + G NAYGWLK Sbjct: 132 SGAGGTEAQDWAEMLLRMYSRWAEQHGYKLEFVEESAGEGAGIKSATIRVVGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DSN+RR TSF+S WVYPVVDD+I+I+I+ESDCRIDTYRASGAGGQH Sbjct: 192 TEAGVHRLVRISPFDSNARRQTSFASAWVYPVVDDTIDIQINESDCRIDTYRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITHIPTG+ V CQ ERSQH+N+A+AW+MLRA+LYE ELQKRE A E + Sbjct: 252 INKTDSAVRITHIPTGIAVACQTERSQHQNRARAWDMLRARLYEAELQKREAAAQALEDT 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT+IGWG QIRSYVLQPYQM+KDLRTN+E + VLDGDLD FM A+LA + Sbjct: 312 KTDIGWGHQIRSYVLQPYQMIKDLRTNVETSDTQAVLDGDLDMFMAASLASR 363 >gi|145297980|ref|YP_001140821.1| peptide chain release factor 2 [Aeromonas salmonicida subsp. salmonicida A449] gi|166223622|sp|A4SJK1|RF2_AERS4 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|142850752|gb|ABO89073.1| peptide chain release factor 2 [Aeromonas salmonicida subsp. salmonicida A449] Length = 365 Score = 298 bits (762), Expect = 9e-79, Method: Composition-based stats. Identities = 176/351 (50%), Positives = 236/351 (67%), Gaps = 1/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LS + L G FD+D +RL +N + E P +W A+ L +ER L+N + I Sbjct: 13 ELSERTELLRGYFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERVSLENVVGTIDV 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D +L+ LA+E +D E ++ ++ +F + SG+ D +D Y+++ Sbjct: 73 LTQGAEDVEMLVSLAVEGEDEDTFNEAVAEADVLETKLVDLEFRRMFSGQHDGSDCYIDI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +G+GGTE+QDWANM+LRMY RW + +K E +E+ DG+ AGIKSAT+ G A+GWL Sbjct: 133 QSGSGGTEAQDWANMVLRMYLRWGDAHGYKPELIELSDGDVAGIKSATVKFTGEYAFGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS RRHTSF S++VYP +DD I+IEI+ +D RID YRASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSGGRRHTSFCSVFVYPEIDDDIDIEINPADLRIDVYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPTGVVVQCQ +RSQHKNK Q L+AKLYELE+QK+ E Sbjct: 253 HVNRTESAVRITHIPTGVVVQCQNDRSQHKNKDQCMKQLKAKLYELEIQKQNAEKQALEE 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 313 TKSDIGWGSQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDKFIEASLK 362 >gi|308048394|ref|YP_003911960.1| bacterial peptide chain release factor 2 (bRF-2) [Ferrimonas balearica DSM 9799] gi|307630584|gb|ADN74886.1| bacterial peptide chain release factor 2 (bRF-2) [Ferrimonas balearica DSM 9799] Length = 365 Score = 297 bits (761), Expect = 1e-78, Method: Composition-based stats. Identities = 187/351 (53%), Positives = 245/351 (69%), Gaps = 1/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LS + L G D+D +RL +N + E P +W A+ L RER +L+ + I + Sbjct: 13 ELSERTELLRGYLDYDAKQERLEEVNAELEQPDVWNEPERAQELGRERSNLEAVVKTIND 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L D LL+LA+EE D +E L+ ++ ++E +F + SG D+NDAYL++ Sbjct: 73 LDQGLEDVRELLDLAVEEQDEESFEEAKAELEGLEAQLEKLEFRRMFSGAQDANDAYLDL 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GGTE+QDW N+LLRMY RWAE + FK E +E+ +GE AG+KSAT+ I G A+GWL Sbjct: 133 QAGSGGTEAQDWCNILLRMYLRWAEAKGFKAEIIEVSEGEVAGLKSATVKISGEYAFGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS RRHTSFSS +VYP VDD+I+IEI+ +D RID YRASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDNIDIEINPADLRIDVYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTT+SAVRITH+PT VVQCQ ERSQHKNK QA L+AKL+ELE+QK+ E Sbjct: 253 HVNTTESAVRITHMPTNTVVQCQNERSQHKNKDQAMKQLKAKLFELEMQKQNAEKQAAED 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 313 AKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDRFIEASLK 362 >gi|312109506|ref|YP_003987822.1| peptide chain release factor 2 [Geobacillus sp. Y4.1MC1] gi|311214607|gb|ADP73211.1| Peptide chain release factor 2 [Geobacillus sp. Y4.1MC1] Length = 367 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 179/353 (50%), Positives = 238/353 (67%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L + G D + R+ L + +P W + A+ ++ E L + + + Sbjct: 13 KMAKRLAEIRGSLDLEAKQARIRELEEQMAEPDFWDDQKAAQTVINEANALKDLVGEFQS 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +++R + + EL EE D + QE +R+ + + + LL+ D N+A LE+ Sbjct: 73 LEERFENLEVTYELIKEEPDEDLQQELVTEAKRLTKDFSEFELQLLLNEPYDKNNAILEL 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA+MLLRMYTRWAEK+ FK E L+ GEEAGIKS TLLIKG NAYG+L Sbjct: 133 HPGAGGTESQDWASMLLRMYTRWAEKKGFKVETLDYLPGEEAGIKSVTLLIKGHNAYGYL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+D++ RRHTSF S V P +DD IEIEI + RIDTYR+SGAGGQ Sbjct: 193 KAEKGVHRLVRISPFDASGRRHTSFVSCEVIPEMDDDIEIEIRPEEIRIDTYRSSGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG+VV CQ ERSQ KN+ +A NML+AKLY+ +L++++ Sbjct: 253 HVNTTDSAVRITHIPTGIVVTCQSERSQIKNREKALNMLKAKLYQKKLEEQQAELAEIRG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY +VKD RTN+E + V+DG++D F+ A L K Sbjct: 313 EQKEIGWGNQIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDIFIDAYLRSK 365 >gi|119776010|ref|YP_928750.1| peptide chain release factor 2 [Shewanella amazonensis SB2B] gi|119768510|gb|ABM01081.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella amazonensis SB2B] Length = 364 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 181/348 (52%), Positives = 235/348 (67%), Gaps = 1/348 (0%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 L LGG+FD+D +RL + + E +W N A+ L +ER L+N + I + Sbjct: 15 SALCSLGGIFDYDAKKERLEEVTRELESSDVWNNPERAQALGKERASLENVVKTIDTLDS 74 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 L D LLELA+EE+D ++ L ++ +E +F + SG D +D YL++ +G Sbjct: 75 GLEDVEGLLELAVEEEDEGTFEDAKAELDELEKSLEDLEFRRMFSGPQDPSDCYLDIQSG 134 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 +GGTE+QDWA M+LRMY RW E FK E +E+ DG+ AGIKSAT+ G AYGWL+ E Sbjct: 135 SGGTEAQDWAEMVLRMYLRWGEAHDFKPELIEVSDGDVAGIKSATIKFTGEYAYGWLRTE 194 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHRLVR SP+DS+ RRHTSF S++VYP +DD IEI+I+ +D RID YRASGAGGQHVN Sbjct: 195 TGVHRLVRKSPFDSSGRRHTSFCSVFVYPEIDDDIEIDINPADLRIDVYRASGAGGQHVN 254 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T+SAVRITH+PT VVQCQ +RSQHKNK A L+AKLYELELQK+ E +K+ Sbjct: 255 RTESAVRITHLPTNTVVQCQNDRSQHKNKDTAMKQLKAKLYELELQKQNAEKQAAEDAKS 314 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 315 DIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQSVLDGDLDKFIEASLK 361 >gi|291618681|ref|YP_003521423.1| PrfB [Pantoea ananatis LMG 20103] gi|291153711|gb|ADD78295.1| PrfB [Pantoea ananatis LMG 20103] Length = 430 Score = 296 bits (758), Expect = 3e-78, Method: Composition-based stats. Identities = 178/344 (51%), Positives = 236/344 (68%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D +RL +N + E P +W A+ L +ER L+ + ++ L D Sbjct: 86 FGGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTFDQMSQGLEDV 145 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LL+LA+E DD E L ++ ++ +F + SGE DS D Y+++ AG+GGTE Sbjct: 146 QGLLDLAVEADDEETFNEAVAELDALEGKLGELEFRRMFSGEYDSADCYIDLQAGSGGTE 205 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA+ML+RMY RWAE + FKTE +E +GE AGIKS T+ + G A+GWL+ E GVHR Sbjct: 206 AQDWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAFGWLRTETGVHR 265 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS RRHTSFSS ++YP VDD I+I+I+ +D RID YRASGAGGQHVN T+SA Sbjct: 266 LVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESA 325 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG V QCQ +RSQHKNK QA ++AKLYELE+QK+ + E +K++IGWG Sbjct: 326 VRITHVPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQMLEDNKSDIGWG 385 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 386 SQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDRFIEASLKA 428 >gi|220934633|ref|YP_002513532.1| peptide chain release factor 2 [Thioalkalivibrio sp. HL-EbGR7] gi|219995943|gb|ACL72545.1| peptide chain release factor 2 [Thioalkalivibrio sp. HL-EbGR7] Length = 364 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 186/350 (53%), Positives = 248/350 (70%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +++ L G D+D +RL ++ + EDP++W N +A+ L RER L+ + I + Sbjct: 13 LQGRVDALRGYLDYDAKRERLEEVSRELEDPNVWNNPEKAQELGRERSRLEEVVLLISRM 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LL++A EEDD + +L + +V +F + SGE D N+AY+++ Sbjct: 73 DKALGDTRDLLDMAAEEDDAETVSAVEADLANYENDVAQLEFRRMFSGEMDENNAYMDIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWANMLLRMY RW E+R FKTE +E+ +GE AGIKSAT+ +GP AYGWL+ Sbjct: 133 AGSGGTEAQDWANMLLRMYLRWGERRGFKTELMEVSEGEVAGIKSATIKFEGPYAYGWLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSF++++V P VDDSIEIEI+ +D R+DTYRASGAGGQH Sbjct: 193 TETGVHRLVRKSPFDSGNRRHTSFAAVFVSPEVDDSIEIEINPADLRVDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SA+RITH+P+GVVV CQ +RSQHKN+ A L+AKLYELELQK+ E + Sbjct: 253 VNRTESAIRITHMPSGVVVACQADRSQHKNRDTAMKQLKAKLYELELQKQNAAKQALEDT 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 313 KSDIGWGSQIRSYVLD-QSRIKDLRTGVEVGNTQAVLDGDLDQFIEASLK 361 >gi|117617639|ref|YP_857857.1| peptide chain release factor 2 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166223621|sp|A0KNK6|RF2_AERHH RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|117559046|gb|ABK35994.1| peptide chain release factor 2 (programmed frameshift) [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 365 Score = 296 bits (757), Expect = 3e-78, Method: Composition-based stats. Identities = 175/351 (49%), Positives = 235/351 (66%), Gaps = 1/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LS + L G D+D +RL +N + E P +W A+ L +ER L+N + I Sbjct: 13 ELSERTELLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERVALENVVGTIDT 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D +L+ELA+E +D E ++ ++ +F + SG+ D +D Y+++ Sbjct: 73 LTQGADDVAMLVELAVEGEDEDTFNEAVAEADVLETKLVDLEFRRMFSGQHDPSDCYIDI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +G+GGTE+QDWANM+LRMY RW + +K E +E +G+ AGIKSAT+ G A+GWL Sbjct: 133 QSGSGGTEAQDWANMVLRMYLRWGDAHGYKPELIECSEGDVAGIKSATIKFTGEYAFGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS RRHTSF S++VYP +DD I+IEI+ +D RID YRASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSGGRRHTSFCSVFVYPEIDDDIDIEINPADLRIDVYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPTGVVVQCQ +RSQHKNK Q L+AKLYELE+QK+ E Sbjct: 253 HVNRTESAVRITHIPTGVVVQCQNDRSQHKNKDQCMKQLKAKLYELEIQKQNAEKQALEE 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 313 TKSDIGWGSQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDKFIEASLK 362 >gi|220925876|ref|YP_002501178.1| hypothetical protein Mnod_6050 [Methylobacterium nodulans ORS 2060] gi|219950483|gb|ACL60875.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060] Length = 375 Score = 296 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 229/351 (65%), Positives = 279/351 (79%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + + L DWD A +RL+ LN ++EDP LW + A+ +MRER L+ A+S I+ ++ Sbjct: 13 KQSIGLLRRHLDWDTADKRLAELNARSEDPALWNDPEAAQKVMRERTQLEEAVSAIRRLE 72 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D L+EL E D + ++E + ++ ++ E +Q E+LL+GEAD ND YLEVHA Sbjct: 73 QGLEDAATLIELGEMEGDEASIREGEEQIRAVQAEAARRQIETLLAGEADGNDTYLEVHA 132 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTESQDWANML RMY RWAE+RK+K E +E +GEEAGIK ATLLIKG NAYGWLK Sbjct: 133 GAGGTESQDWANMLHRMYARWAERRKYKVEIVEWSEGEEAGIKGATLLIKGHNAYGWLKT 192 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVRISPYDSN+RRHTSF+S+WVYPV+DD I IE+ ESDCRIDTYR+SGAGGQHV Sbjct: 193 ESGVHRLVRISPYDSNARRHTSFASVWVYPVIDDRITIEVKESDCRIDTYRSSGAGGQHV 252 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSAVRITHIPTG+VV CQQERSQHKN+A AWNMLRA+LYELEL+KREE AN +SK Sbjct: 253 NTTDSAVRITHIPTGIVVACQQERSQHKNRATAWNMLRARLYELELKKREEKANAEAASK 312 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 T+IGWG QIRSYVLQPYQ+VKDLRT + TSP DVLDG++D F++A+LA + Sbjct: 313 TDIGWGHQIRSYVLQPYQLVKDLRTGAQSTSPGDVLDGEIDPFIEASLAQR 363 >gi|222056175|ref|YP_002538537.1| hypothetical protein Geob_3093 [Geobacter sp. FRC-32] gi|221565464|gb|ACM21436.1| hypothetical protein Geob_3093 [Geobacter sp. FRC-32] Length = 370 Score = 296 bits (757), Expect = 4e-78, Method: Composition-based stats. Identities = 169/350 (48%), Positives = 243/350 (69%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++ ++N L G D D+ + + L ++ P W + A+ +++ER ++ ++ + Sbjct: 12 MAERINNLRGSLDIDSLREDIQELESRIAAPGFWDDNEAAQKVLKERTVMEKTLASWDRL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ D +L+EL E +D + L E D +++ + +F+ +LSG D++ + ++ Sbjct: 72 NRQVEDIRVLIELGSEAEDEATLAEVHDLNDQLEKGLVDAEFQKMLSGPHDASSCFFSIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDWA MLLRMY R+ E++ +KTE + G+EAG+K T + G AYG+LK Sbjct: 132 SGAGGTESQDWAEMLLRMYLRYCERKGWKTEITDYQSGDEAGVKGVTFSVSGEYAYGYLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVRISP+DSN+RRHTSF+S++V+P ++D I+++I E+D R+DT+R+SGAGGQH Sbjct: 192 AEVGIHRLVRISPFDSNARRHTSFASVFVFPEIEDDIDVKIVETDLRVDTFRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSA+RITHIPTG+VV CQ ERSQH N+A A +LRAKLYE ELQ+RE A Sbjct: 252 VNTTDSAIRITHIPTGIVVACQTERSQHMNRATAMRVLRAKLYERELQERESQAAEIAGE 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K EIGWG QIRSYVL PY+MVKDLRT +E +P VLDG+L+ F+ A L Sbjct: 312 KKEIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGELEQFIIAFLM 361 >gi|312115773|ref|YP_004013369.1| peptide chain release factor 2 [Rhodomicrobium vannielii ATCC 17100] gi|311220902|gb|ADP72270.1| Peptide chain release factor 2 [Rhodomicrobium vannielii ATCC 17100] Length = 376 Score = 295 bits (754), Expect = 8e-78, Method: Composition-based stats. Identities = 225/353 (63%), Positives = 278/353 (78%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L+ L DWD A RL+ LN EDP LW N A+ L+RERQHLD A++ + Sbjct: 11 EIKQSLSLLRRYLDWDKAKIRLANLNEIVEDPTLWDNPQRAQKLLRERQHLDTALTAYSQ 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + RL D + L+EL EE D +++E +L ++ EV+ ++ E+LLSGEAD ND +LEV Sbjct: 71 LAARLDDAVGLIELGEEESDEEVVKEAEASLAVLQTEVQKREVEALLSGEADGNDTFLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDW MLLRMY RWAE++ +K E +E GEEAG+KSAT+ +KG NA+GWL Sbjct: 131 HAGAGGTESQDWTEMLLRMYMRWAEEQGYKVELIESAAGEEAGLKSATIQVKGSNAFGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDSN+RRHTSF+S+WVYPVVDD+I+I ++ESDCRIDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFASVWVYPVVDDTIDIAVNESDCRIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PTG+VVQCQ ERSQHKN+A AWNML+A+LYE EL+KRE+ A+ + Sbjct: 251 HVNTTDSAVRITHVPTGIVVQCQMERSQHKNRATAWNMLKARLYEQELKKREDAAHAAAA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 SKT+IGWG QIRSYVLQPYQMVKDLRT I T+P VLDGDL F++A LA + Sbjct: 311 SKTDIGWGHQIRSYVLQPYQMVKDLRTGIVNTNPPAVLDGDLTAFIEAALAQR 363 >gi|319789223|ref|YP_004150856.1| hypothetical protein Theam_0242 [Thermovibrio ammonificans HB-1] gi|317113725|gb|ADU96215.1| hypothetical protein Theam_0242 [Thermovibrio ammonificans HB-1] Length = 373 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 183/353 (51%), Positives = 244/353 (69%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL + + G FD D +RLS + + P W + +A+ L ER HL+ + K Sbjct: 14 KLKEKYAEIRGYFDLDKMKRRLSEIEEEMASPDFWNDPKKAQSLSVERNHLEQELEAFKS 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ ++ D+ +L+E+A EE D S+L E L + ++ + + +LSGE D N+A + + Sbjct: 74 VEQKIEDSEVLIEMAEEEQDGSLLDEAEQMLSDLDKTLDRLEVKKVLSGEFDKNNAIVTI 133 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTES DWA ML+RMY RWAE++ F+ E L++ + EEAGIKSATLLIKGP AYG+L Sbjct: 134 HAGAGGTESCDWAQMLMRMYIRWAERKGFEVEILDLQENEEAGIKSATLLIKGPYAYGFL 193 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E G HRLVRISP+D+N+RRHTSF + V P +D+ IE+EI E D RIDTYRASGAGGQ Sbjct: 194 RAEHGTHRLVRISPFDANARRHTSFCGVIVVPEIDEDIEVEIKEEDLRIDTYRASGAGGQ 253 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVRITHIPTG+VV CQ ERSQ +N+ +A +L+A+LYELE QKREE Sbjct: 254 HVNKTDSAVRITHIPTGIVVTCQSERSQIQNRQRAMKILKARLYELERQKREEKIAQARG 313 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 I WG QIRSY+ QPY++VKD RT +E ++ V+DGD+D F++A L K Sbjct: 314 EHKSIAWGNQIRSYIFQPYRLVKDHRTGVETSNIDAVMDGDIDLFIEAYLKQK 366 >gi|332288942|ref|YP_004419794.1| peptide chain release factor 2 [Gallibacterium anatis UMN179] gi|330431838|gb|AEC16897.1| peptide chain release factor 2 [Gallibacterium anatis UMN179] Length = 351 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 184/344 (53%), Positives = 247/344 (71%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+DN V+RL ++ + E P +W + +A+ L +ER L+ ++ IK +Q L D Sbjct: 7 LGGIFDFDNKVERLEEVSAELEQPDVWNDPEKAQALGKERSSLEAVVNTIKSLQQGLDDV 66 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+E DD + E L +++ + +F + SG D+ D Y+++ AG+GGTE Sbjct: 67 DGLLELAIEADDQATFDEAVAELDQLEQSLAKLEFRRMFSGANDAADCYVDLQAGSGGTE 126 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDW MLLRMY RWAE + FK E +E+ DG+ AGIKSAT+ + G A+GWL+ E G+HR Sbjct: 127 AQDWTEMLLRMYLRWAESKGFKAELMEVSDGDVAGIKSATIRVSGEYAFGWLRTETGIHR 186 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DSN+RRHTSFS+++VYP ++D I+IEI+ +D RID YRASGAGGQHVN T+SA Sbjct: 187 LVRKSPFDSNNRRHTSFSAVFVYPEINDDIDIEINPADLRIDVYRASGAGGQHVNRTESA 246 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VVQCQ +RSQHKNK QA L+AKLYELEL+K+ E SK++IGWG Sbjct: 247 VRITHMPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELKKKNAEKQALEESKSDIGWG 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 307 SQIRSYVLDD-ARIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 349 >gi|217974576|ref|YP_002359327.1| hypothetical protein Sbal223_3420 [Shewanella baltica OS223] gi|254790920|sp|B8E5Q1|RF2_SHEB2 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|217499711|gb|ACK47904.1| hypothetical protein Sbal223_3420 [Shewanella baltica OS223] Length = 365 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 174/351 (49%), Positives = 236/351 (67%), Gaps = 1/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ + L G+FD+D +RL + + E +W + A+ L +ER L+ + I + Sbjct: 13 ELAERTQLLRGIFDYDAKNERLEEVTRELESSEVWNDPERAQALGKERASLEAVVKTIDD 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L D LLELA+EE+D ETS L ++ + +F + SG D+++ YL++ Sbjct: 73 MDSGLEDVEGLLELAIEEEDEDTFNETSKELDYLESRLADLEFRRMFSGPQDASNCYLDI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +G+GGTE+QDWANM+LRMY RW E F E +E+ DG+ AGIK AT+ G A+GWL Sbjct: 133 QSGSGGTEAQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS+ RRHTSF S++VYP +DD I I+I+ SD RIDTYRASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPSDLRIDTYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SA+RITH+PT VVQCQ +RSQHKNK A L+AKL+ELE+ K+ E Sbjct: 253 HVNKTESAIRITHLPTNTVVQCQNDRSQHKNKDAAMKQLKAKLFELEMLKQNADKQAAED 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 313 AKSDIGWGSQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDKFIEASLK 362 >gi|217976907|ref|YP_002361054.1| hypothetical protein Msil_0721 [Methylocella silvestris BL2] gi|217502283|gb|ACK49692.1| conserved hypothetical protein [Methylocella silvestris BL2] Length = 376 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 216/352 (61%), Positives = 268/352 (76%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + + L D A +RL+ LN K EDP+LW + A+ +MRER L++ + + Sbjct: 12 IKQSMGLLRRHLDVATAERRLAELNAKVEDPNLWDDADAAQKIMRERTDLEDRLGSLARF 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D + L+ELA E+D + +E L+ +KLE E +Q E+LLSGE D ND Y+EVH Sbjct: 72 DSELDDAVTLVELAEAEEDTATEKEAIGQLKSLKLEAERRQIEALLSGEVDGNDTYIEVH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTES DWA ML RMY RWAE+ KFK E +E G+EAG+KS TLL+KG NA+GW K Sbjct: 132 SGAGGTESCDWARMLFRMYARWAERHKFKVEVIEETAGDEAGLKSGTLLVKGHNAHGWAK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DSN+RRHTSF+S+WVYPV+DD I+I++ ESDCRIDTYR+SGAGGQH Sbjct: 192 TESGVHRLVRISPFDSNARRHTSFASVWVYPVIDDKIDIDVKESDCRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIP+G+VV CQ ERSQHKN+A AWNMLRA+LYE E++KRE AN E+S Sbjct: 252 VNTTDSAVRITHIPSGIVVACQGERSQHKNRATAWNMLRARLYEQEIEKREAAANATEAS 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KTEIGWG QIRSYVLQPYQ+VKDLR+ + +P DVLDGDLD FM+A LA + Sbjct: 312 KTEIGWGHQIRSYVLQPYQLVKDLRSGVTSGTPDDVLDGDLDSFMEAALAQR 363 >gi|253687049|ref|YP_003016239.1| hypothetical protein PC1_0648 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259585229|sp|C6D8Z5|RF2_PECCP RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|251753627|gb|ACT11703.1| hypothetical protein PC1_0648 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 365 Score = 294 bits (752), Expect = 1e-77, Method: Composition-based stats. Identities = 184/351 (52%), Positives = 240/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL +N + E P +W A+ L +ER L+ + I ++ Sbjct: 14 LSERSAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTIDQL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+EEDD +T+ L ++ ++ +F + SG+ DS D YL++ Sbjct: 74 TQGLEDVAGLLELAVEEDDEDTFNDTTVELDALENKLGQLEFRRMFSGQYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E DG+ AG KSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTKSATIKIIGDYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP V+D I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVEDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH+PTG+V QCQ +RSQHKNK QA L+AKLYE E+QK+ E + Sbjct: 254 VNRTESAVRITHMPTGIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363 >gi|197105302|ref|YP_002130679.1| peptide chain release factor 2 [Phenylobacterium zucineum HLK1] gi|238690157|sp|B4RCR3|RF2_PHEZH RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|196478722|gb|ACG78250.1| peptide chain release factor 2 [Phenylobacterium zucineum HLK1] Length = 369 Score = 294 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 212/351 (60%), Positives = 258/351 (73%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 S + NC GG+FDW+ A+++L LN + EDP LW + EA+ + RER L + + ++ Sbjct: 10 SSRSNCSGGVFDWEPALRKLDELNARVEDPTLWNDPDEAQAVSRERSRLSAQVEAVHGLE 69 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D L ELA EE D + L E L+ IK + E+LLSGEAD NDAY+E+++ Sbjct: 70 RDLADALGYAELADEEGDEASLDEARAQLREIKERAARAELEALLSGEADGNDAYVEINS 129 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTES DWA MLLRMYTRWA+ + +E GE+AGIKS TL +KG NAYGWLK Sbjct: 130 GAGGTESNDWAGMLLRMYTRWAQAHGMSVDVIEETAGEQAGIKSVTLQVKGTNAYGWLKT 189 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVRISPYDS++RRHTSF+S+WVYPV+DD+IEIEI+ +D R DTYRASGAGGQHV Sbjct: 190 EAGVHRLVRISPYDSSARRHTSFASVWVYPVIDDNIEIEINPADVRTDTYRASGAGGQHV 249 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N TDSAVR+THIPTG+ V CQ +RSQH+N+ QAW MLRA+LYELEL+KRE E K Sbjct: 250 NKTDSAVRLTHIPTGIAVACQTQRSQHQNRDQAWKMLRARLYELELEKREAAQQALEDQK 309 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 T+IGWG QIRSYVLQPYQMVKDLRT +E + VLDGDLD FM A LA + Sbjct: 310 TDIGWGHQIRSYVLQPYQMVKDLRTEVETSDTQGVLDGDLDAFMGAALAQR 360 >gi|330839015|ref|YP_004413595.1| Peptide chain release factor 2 [Selenomonas sputigena ATCC 35185] gi|329746779|gb|AEC00136.1| Peptide chain release factor 2 [Selenomonas sputigena ATCC 35185] Length = 368 Score = 294 bits (751), Expect = 2e-77, Method: Composition-based stats. Identities = 180/352 (51%), Positives = 239/352 (67%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + +L +G D ++++ L K +P W N EA+ + +E + ++ KEI Sbjct: 12 MQAKLKEMGDSLDVARKEEKIAELEYKMGEPTFWDNAEEAQKINQELAAIKGSVDKYKEI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D LLE+ALEE+D S+ E + IK V + E LLSG D+N+A L +H Sbjct: 72 VSKTDDAQALLEMALEENDTSLEPEVQTEFETIKTAVRELELEVLLSGPYDANNAILTLH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDW MLLRMY RWAE+ F ++ G+EAG+KSATL I G NAYG+LK Sbjct: 132 AGAGGTEAQDWTQMLLRMYGRWAERHGFSVVTADLLPGDEAGVKSATLFINGHNAYGYLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DSN+RRHTSFS+ + P +DD++E+ I+ +D R+DTYRASGAGGQH Sbjct: 192 SEKGVHRLVRISPFDSNARRHTSFSACDIMPEIDDAVEVAINMADVRVDTYRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T SAVR+TH+PTG+VVQCQ ERSQ +N+ Q MLRAKL+ELE +K+E E Sbjct: 252 INKTSSAVRMTHMPTGIVVQCQNERSQLQNREQCMKMLRAKLFELEQEKKEAEIQKLEGD 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +I WG QIRSYV QPY MVKD+RT +E + V+DGDLD F++A LA K Sbjct: 312 QQKIEWGSQIRSYVFQPYTMVKDMRTGMETGNVQAVMDGDLDAFIEAFLAAK 363 >gi|50119718|ref|YP_048885.1| peptide chain release factor 2 [Pectobacterium atrosepticum SCRI1043] gi|81646129|sp|Q6D946|RF2_ERWCT RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|49610244|emb|CAG73687.1| putative peptide chain release factor 2 [Pectobacterium atrosepticum SCRI1043] Length = 365 Score = 293 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 186/351 (52%), Positives = 240/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + L G D+D +RL +N + E P +W A+ L +ER L+ + I ++ Sbjct: 14 LAERSAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTIDQL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+EEDD ETS L ++ ++ +F + SGE DS D YL++ Sbjct: 74 AQGLEDVTGLLELAVEEDDEDTFNETSAELDVLENKLGQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E DG+ AG KSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTKSATIKIIGDYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH+PT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ + E + Sbjct: 254 VNRTESAVRITHLPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQVMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363 >gi|329850508|ref|ZP_08265353.1| peptide chain release factor 2 [Asticcacaulis biprosthecum C19] gi|328840823|gb|EGF90394.1| peptide chain release factor 2 [Asticcacaulis biprosthecum C19] Length = 358 Score = 293 bits (749), Expect = 3e-77, Method: Composition-based stats. Identities = 206/348 (59%), Positives = 256/348 (73%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 ++C GG+FDWD A++RL LN + EDP LW EA+ + RER L +I ++ ++ L Sbjct: 1 MDCSGGVFDWDVALRRLDELNARVEDPTLWDKPDEAQKINRERSKLSASIEAVRTLEKEL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D + EL E D S+++E+ L+ +K + E+LLSGEAD NDAY+E+++GAG Sbjct: 61 KDAVEFAELGDMEGDESLIEESRAMLKGLKAHAGRAELEALLSGEADGNDAYVEINSGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTES DWA +L+RMYTRWA E E GE+AGIKS TL+IKG NAYGWLK E G Sbjct: 121 GTESCDWAGILMRMYTRWATAHGMTVEVEEETSGEQAGIKSTTLMIKGENAYGWLKTEAG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+DS++RRHTSF+S+WVYPVVDD+I I+I+ +D R DTYRASGAGGQH+N T Sbjct: 181 VHRLVRISPFDSSARRHTSFASVWVYPVVDDTIVIDINPADVRTDTYRASGAGGQHINKT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVR+THIPTG+ V CQ RSQH N+ +AW MLRA+LYE ELQKRE E KT+I Sbjct: 241 DSAVRLTHIPTGIAVACQAGRSQHANRDEAWKMLRARLYEQELQKREAAQQALEDQKTDI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 GWG QIRSYVLQPYQMVKDLRTN+E + VLDGDLD FM A+LA + Sbjct: 301 GWGHQIRSYVLQPYQMVKDLRTNVETSDSQGVLDGDLDAFMGASLAQR 348 >gi|269103439|ref|ZP_06156136.1| peptide chain release factor 2 [Photobacterium damselae subsp. damselae CIP 102761] gi|268163337|gb|EEZ41833.1| peptide chain release factor 2 [Photobacterium damselae subsp. damselae CIP 102761] Length = 347 Score = 293 bits (749), Expect = 4e-77, Method: Composition-based stats. Identities = 181/344 (52%), Positives = 240/344 (69%), Gaps = 1/344 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGG+FD+D +RL +N + E P +W A+ L +ER L+ + I ++ + D Sbjct: 2 SLGGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERASLEAVVETIDQLDQGVDD 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 LLELA+E +D E L ++ ++ +F + SG+ D +D YL++ AG+GGT Sbjct: 62 VEGLLELAVEAEDQETFDEIEPELAELEAKLAKLEFRRMFSGDHDGSDCYLDLQAGSGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDW +M+LRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G AYGWL+ E GVH Sbjct: 122 EAQDWTSMMLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATIRISGEYAYGWLRTETGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DS RRHTSF+S +VYP VDD+I+I+I+ SD RID YRASGAGGQHVNTT+S Sbjct: 182 RLVRKSPFDSGGRRHTSFASAFVYPEVDDNIDIDINPSDLRIDVYRASGAGGQHVNTTES 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITHIPT VVQCQ +RSQHKNK QA L+AKL+ELE+QK+ E SK++IGW Sbjct: 242 AVRITHIPTNTVVQCQNDRSQHKNKDQAMKQLKAKLFELEMQKQNAEKQANEDSKSDIGW 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 302 GSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLK 344 >gi|115352205|ref|YP_774044.1| peptide chain release factor 2 [Burkholderia ambifaria AMMD] gi|115282193|gb|ABI87710.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia ambifaria AMMD] Length = 406 Score = 293 bits (749), Expect = 4e-77, Method: Composition-based stats. Identities = 179/346 (51%), Positives = 250/346 (72%), Gaps = 1/346 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD+D RL+ +N + EDP++W + A+ L RE++ L+ ++ + + L Sbjct: 60 ASFGGIFDYDAKSARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLR 119 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L L ELA EE D L + D+ ++++ V +F + S AD N+ ++++ AGAGG Sbjct: 120 DALDLFELAREEGDEDTLVASEDDAKKLEARVGDIEFRRMFSNPADPNNCFIDIQAGAGG 179 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+L+ E G+ Sbjct: 180 TEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGFLRTETGI 239 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+E++ +D RIDTYRASGAGGQH+N TD Sbjct: 240 HRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPADLRIDTYRASGAGGQHINKTD 299 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE E++KR+ + ESSKT++G Sbjct: 300 SAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEMRKRQAEQDKLESSKTDVG 359 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYVL VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 360 WGHQIRSYVLD-QSRVKDLRTNVEMSNTRAVLDGDLDDFISASLKQ 404 >gi|237807749|ref|YP_002892189.1| peptide chain release factor 2 [Tolumonas auensis DSM 9187] gi|259585231|sp|C4LCN9|RF2_TOLAT RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|237500010|gb|ACQ92603.1| hypothetical protein Tola_0975 [Tolumonas auensis DSM 9187] Length = 365 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 169/351 (48%), Positives = 232/351 (66%), Gaps = 1/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LS + L G D+D +RL ++ + E P +W A+ L +ER L++ ++ I Sbjct: 13 ELSERTELLRGYLDYDAKKERLEEVSAELEQPEVWNEPERAQALGKERSALESVVATIDV 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D +L+ LA+E +D E ++ ++ +F + SG+ D++D Y+++ Sbjct: 73 LTQGAEDVEMLVSLAVEGEDEETFHEAETEADALEKKLVDLEFRRMFSGQHDASDCYMDI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +G+GGTE+QDWA+M+LRMY RW E +K E +E DG+ AGIKSAT+ G A+GWL Sbjct: 133 QSGSGGTEAQDWADMVLRMYLRWGEAHGYKPELIECSDGDVAGIKSATIKFTGEYAFGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS RRHTSF S +VYP +D+ +EIEI+ +D RID YRASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSGGRRHTSFCSAFVYPEIDEDVEIEINPADLRIDVYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPT V QCQ +RSQHKNK QA L+AKLYELE+ K+ E Sbjct: 253 HVNRTESAVRITHIPTNTVTQCQNDRSQHKNKDQAMKQLKAKLYELEMMKQNAEKQALEE 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 313 TKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQSVLDGDLDKFIEASLK 362 >gi|323340175|ref|ZP_08080439.1| peptide chain release factor RF2 [Lactobacillus ruminis ATCC 25644] gi|323092366|gb|EFZ34974.1| peptide chain release factor RF2 [Lactobacillus ruminis ATCC 25644] Length = 358 Score = 292 bits (748), Expect = 4e-77, Method: Composition-based stats. Identities = 167/348 (47%), Positives = 234/348 (67%) Query: 6 QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 + LGGLFD D + ++ +K DP W N EA+ ++ E L N ++++ Sbjct: 3 RSRTLGGLFDLDGLQEAIADNESKMADPDFWNNQEEAQKVINENNELKNKYDNFNQLEEA 62 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 + D +LLE+ E+DD ++ E S+ + + +++ Q LL+G+ D ++A LE+H GA Sbjct: 63 IEDLEVLLEMVQEDDDDELVSELSEKFELAQKKMQEYQLSLLLNGKYDKDNAILELHPGA 122 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTESQDW +MLLRMYTRWAE+ F E + G+EAGIKS TL I G NAYG+L+ E+ Sbjct: 123 GGTESQDWGSMLLRMYTRWAEQHGFSVETDDYQAGDEAGIKSVTLTISGHNAYGYLRSEK 182 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVRISP+DS RRHTSF S+ V P +DD +E+++ D +++ +R+SGAGGQH+N Sbjct: 183 GVHRLVRISPFDSAGRRHTSFCSVNVMPELDDDVEVDLRPEDIKMEVFRSSGAGGQHINK 242 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T SAVR+ HIPTG+VV Q +RSQ +N+A A MLR+KLY++EL+++E+ + + + Sbjct: 243 TSSAVRLIHIPTGIVVSSQAQRSQFQNRATAEKMLRSKLYQMELEEQEKKRAAIQGEQLD 302 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 IGWG QIRSYV PY MVKD RTN E + S V+DGDLD F+ A L Sbjct: 303 IGWGSQIRSYVFHPYSMVKDHRTNYETGNISSVMDGDLDGFINAYLQW 350 >gi|255659162|ref|ZP_05404571.1| peptide chain release factor 2 [Mitsuokella multacida DSM 20544] gi|260848613|gb|EEX68620.1| peptide chain release factor 2 [Mitsuokella multacida DSM 20544] Length = 368 Score = 292 bits (748), Expect = 5e-77, Method: Composition-based stats. Identities = 170/353 (48%), Positives = 240/353 (67%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L +L+ +G + ++++ L K +P W + +A+ + +E + ++ K Sbjct: 11 ELKTKLDQMGESLEVPAKEEKIAELEYKMGEPTFWDDAEKAQKINQELNDVKISVDKYKN 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D L E+ +EE D S+ ++ L + +E Q E LLSG D+N+A L + Sbjct: 71 LVAKFEDAQTLWEMGMEEQDESMEEDVKSELAAVAEGLESLQLEVLLSGPYDANNAILTL 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTE+QDW MLLRMY RWAE+ F E ++ G+EAG+KSATL IKG NAYG+L Sbjct: 131 HAGAGGTEAQDWTQMLLRMYGRWAERHGFTVETADLLPGDEAGVKSATLFIKGHNAYGFL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E+G+HRLVRISP+D+ +RRHTSF++ + P +DD++E+ I+ SD R+DTYRASGAGGQ Sbjct: 191 RSEKGIHRLVRISPFDAQARRHTSFAACDIMPEIDDNVEVNINMSDVRVDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+N T SAVR+TH+PTG+VVQCQ ERSQ +N+ Q MLRAKL+ELE++K+E E Sbjct: 251 HINKTSSAVRMTHMPTGIVVQCQNERSQLQNREQCLKMLRAKLFELEMEKKEAELAKLEG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +I WG QIRSYV QPY MVKD RTN+E + V+DGD+D F++A LA K Sbjct: 311 DQQKIEWGSQIRSYVFQPYTMVKDHRTNVETGNVQAVMDGDIDMFIRAFLAAK 363 >gi|83311912|ref|YP_422176.1| peptide chain release factor 2 [Magnetospirillum magneticum AMB-1] gi|123541518|sp|Q2W3F8|RF2_MAGMM RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|82946753|dbj|BAE51617.1| Protein chain release factor B [Magnetospirillum magneticum AMB-1] Length = 371 Score = 292 bits (747), Expect = 5e-77, Method: Composition-based stats. Identities = 216/352 (61%), Positives = 263/352 (74%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + R L +WD A+ RL LN E+P LW + A+ +MRER LD+AI + + Sbjct: 12 IRRSAALLKRHLNWDEALMRLDELNASAENPDLWNDAGAAQKIMRERNELDSAIQGCRAL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L+EL E D +++ + + ++ +K + E+LLSGEAD ND Y+E++ Sbjct: 72 ERELADLAELIELGEMEGDQTVIDDAEEQVRALKERAAKMELETLLSGEADHNDCYMEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTESQDWA MLLRMYTRWAEK +K E LE GE+AGIKSAT+ I G NAYGWLK Sbjct: 132 AGAGGTESQDWAEMLLRMYTRWAEKHGYKVEWLEESAGEQAGIKSATIRILGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS WVYPV+DD+I+I+I+ES+CRIDTYRASGAGGQH Sbjct: 192 TESGVHRLVRISPYDSAARRHTSFSSAWVYPVIDDTIDIQINESECRIDTYRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITHIPTG+ V CQ ERSQH+N+A+AW+MLRA+LYE ELQKRE A E Sbjct: 252 INKTDSAVRITHIPTGIAVACQMERSQHQNRARAWDMLRARLYEAELQKREAAAQALEDQ 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT+IGWG QIRSYVLQPYQMVKDLRTN+E + VLDGDLD FM A+LA + Sbjct: 312 KTDIGWGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDMFMAASLAAR 363 >gi|46201582|ref|ZP_00208157.1| COG1186: Protein chain release factor B [Magnetospirillum magnetotacticum MS-1] Length = 371 Score = 292 bits (747), Expect = 5e-77, Method: Composition-based stats. Identities = 217/352 (61%), Positives = 264/352 (75%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + R L +WD A+ RL LN E+P LW + A+ +MRER LD+AI + + Sbjct: 12 IRRSAALLKRHLNWDEALMRLDELNASAENPDLWNDAGAAQKIMRERNDLDSAIQGCRAL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D + L+EL E D +++ + + ++ +K + E+LLSGEAD ND Y+E++ Sbjct: 72 ERELADLIELIELGEMEGDQTVIDDAEEQIRAVKERAAKMELETLLSGEADHNDCYMEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTESQDWA MLLRMYTRWAEK +K E LE GE+AGIKSAT+ I G NAYGWLK Sbjct: 132 AGAGGTESQDWAEMLLRMYTRWAEKHGYKVEWLEESSGEQAGIKSATIRILGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS WVYPV+DDSI+I+I+ES+CRIDTYRASGAGGQH Sbjct: 192 TESGVHRLVRISPYDSAARRHTSFSSAWVYPVIDDSIDIQINESECRIDTYRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITHIPTG+ V CQ ERSQH+N+A+AW+MLRA+LYE ELQKRE A E Sbjct: 252 INKTDSAVRITHIPTGIAVACQMERSQHQNRARAWDMLRARLYEAELQKREAAAQALEDQ 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT+IGWG QIRSYVLQPYQMVKDLRTN+E + VLDGDLD FM A+LA + Sbjct: 312 KTDIGWGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDMFMAASLAAR 363 >gi|119897788|ref|YP_933001.1| peptide chain release factor 2 [Azoarcus sp. BH72] gi|119670201|emb|CAL94114.1| peptide chain release factor [Azoarcus sp. BH72] Length = 373 Score = 292 bits (747), Expect = 5e-77, Method: Composition-based stats. Identities = 174/343 (50%), Positives = 236/343 (68%), Gaps = 1/343 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +L +N EDP +W + A+ L +E++ L+ + +++I+ + D Sbjct: 30 GGIFDYDEKSSKLEEVNRALEDPAVWNDAARAQELGKEKRQLEGVVLTLQQIEQQSADLK 89 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L +LA E D + +L ++ V +F + S D N ++E+ AGAGGTE+ Sbjct: 90 DLFDLADMEGDDDTFEAVEGDLVGLEALVGQLEFRRMFSNPMDPNACFIEIQAGAGGTEA 149 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA ML RMY R+ EK+ F E +E +GE AGIK+ T+ G AYG+L+ E G+HRL Sbjct: 150 QDWAGMLERMYLRYGEKKGFTVELMEETEGEVAGIKNCTIKFTGDYAYGFLRTETGIHRL 209 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DSN+RRHTSF+S++VYP VDDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV Sbjct: 210 VRKSPFDSNARRHTSFTSVFVYPEVDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 269 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PTG+VVQCQ +RSQH+NK +A +ML+A+LYELEL+KR+ E +K++IGWG Sbjct: 270 RITHQPTGIVVQCQNDRSQHRNKDEAMSMLKARLYELELRKRQAEQQKLEDAKSDIGWGH 329 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT E + VLDGDL+DF+ A+L Sbjct: 330 QIRSYVLD-QSRIKDLRTGYEVGNTQAVLDGDLEDFIAASLKQ 371 >gi|182677929|ref|YP_001832075.1| hypothetical protein Bind_0939 [Beijerinckia indica subsp. indica ATCC 9039] gi|182633812|gb|ACB94586.1| hypothetical protein Bind_0939 [Beijerinckia indica subsp. indica ATCC 9039] Length = 376 Score = 292 bits (747), Expect = 6e-77, Method: Composition-based stats. Identities = 220/352 (62%), Positives = 269/352 (76%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L L D D + +RL LN K E+P LW + A+ +MRER L+ + IK+ Sbjct: 12 IKQSLGLLRRHLDVDTSTRRLEELNAKVENPDLWNDAEAAQKIMRERTELEERLGSIKQF 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L+ELA E D + +E D L+ +K+E E +Q E+LLSGE DSND Y+EVH Sbjct: 72 EGDLDDAATLIELAEAEGDEASEKEGIDLLKGLKIEAERRQIEALLSGEVDSNDTYIEVH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTES DWA ML RMY RWAE+ +FK E +E G+EAGIKSATLL+KG NA+GW K Sbjct: 132 SGAGGTESCDWARMLFRMYARWAERHRFKVEIIEETAGDEAGIKSATLLVKGHNAHGWAK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DSN+RRHTSF+S+WVYPV+DD IEI++ ESDCRIDTYR+SGAGGQH Sbjct: 192 TESGVHRLVRISPFDSNARRHTSFASVWVYPVIDDKIEIDVKESDCRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +NTTDSAVRITHIP+G+VV CQ ERSQHKN+A AWNMLRA+LYE EL++RE AN E++ Sbjct: 252 INTTDSAVRITHIPSGIVVACQGERSQHKNRATAWNMLRARLYEKELERREAEANATEAT 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KTEIGWG QIRSYVLQPYQ+VKDLRT +P +VLDGDLD FM+A LA K Sbjct: 312 KTEIGWGHQIRSYVLQPYQLVKDLRTGTTSGTPDEVLDGDLDTFMEAALAQK 363 >gi|197285860|ref|YP_002151732.1| peptide chain release factor 2 [Proteus mirabilis HI4320] gi|238693208|sp|B4F0M7|RF2_PROMH RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|194683347|emb|CAR44054.1| peptide chain release factor 2 [Proteus mirabilis HI4320] Length = 365 Score = 292 bits (747), Expect = 6e-77, Method: Composition-based stats. Identities = 185/352 (52%), Positives = 245/352 (69%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +++ + L G D+D +RL +N + E P +W +A+ L +ER L+ + I + Sbjct: 13 EVAERTQVLRGYLDYDAKKERLEEVNAELEQPDVWNEPEKAQALGKERSSLEAIVETIDQ 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D LL+LA+E DD E L+ + ++E +F + SGE DS D YL++ Sbjct: 73 LEQGLEDVSGLLDLAVEADDEETFNEAVAELEGLNKKLEQLEFRRMFSGEYDSADCYLDL 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GGTE+QDWA+ML+RMY RWAE R FKTE +E DG+ AG+KSAT+ I G AYGWL Sbjct: 133 QAGSGGTEAQDWASMLMRMYLRWAESRGFKTEIIEESDGDVAGLKSATIKIIGEYAYGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS RRHTSFSS +VYP VDD+I+IEI+ +D RID YRASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDNIDIEINPADLRIDVYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITH+PTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ + E Sbjct: 253 HVNKTESAVRITHVPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNADKQVMED 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 313 NKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363 >gi|315268921|gb|ADT95774.1| Peptide chain release factor 2 [Shewanella baltica OS678] Length = 365 Score = 292 bits (747), Expect = 6e-77, Method: Composition-based stats. Identities = 173/351 (49%), Positives = 234/351 (66%), Gaps = 1/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ + L G D+D +RL + + E +W + A+ L +ER L+ + I + Sbjct: 13 ELAERTQLLRGYLDYDAKNERLEEVTRELESSEVWNDPERAQALGKERASLEAVVKTIDD 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L D LLELA+EE+D ETS L ++ + +F + SG D+++ YL++ Sbjct: 73 MDSGLEDVEGLLELAIEEEDEDTFNETSKELDYLESRLADLEFRRMFSGPQDASNCYLDI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +G+GGTE+QDWANM+LRMY RW E F E +E+ DG+ AGIK AT+ G A+GWL Sbjct: 133 QSGSGGTEAQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS+ RRHTSF S++VYP +DD I I+I+ SD RIDTYRASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPSDLRIDTYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SA+RITH+PT VVQCQ +RSQHKNK A L+AKL+ELE+ K+ E Sbjct: 253 HVNKTESAIRITHLPTNTVVQCQNDRSQHKNKDAAMKQLKAKLFELEMLKQNADKQAAED 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 313 AKSDIGWGSQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDKFIEASLK 362 >gi|254780753|ref|YP_003065166.1| peptide chain release factor 2 [Candidatus Liberibacter asiaticus str. psy62] gi|254040430|gb|ACT57226.1| peptide chain release factor 2 [Candidatus Liberibacter asiaticus str. psy62] Length = 355 Score = 292 bits (746), Expect = 7e-77, Method: Composition-based stats. Identities = 355/355 (100%), Positives = 355/355 (100%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK Sbjct: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE Sbjct: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW Sbjct: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG Sbjct: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE Sbjct: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK Sbjct: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 >gi|261820184|ref|YP_003258290.1| peptide chain release factor 2 [Pectobacterium wasabiae WPP163] gi|261604197|gb|ACX86683.1| hypothetical protein Pecwa_0864 [Pectobacterium wasabiae WPP163] Length = 365 Score = 291 bits (745), Expect = 9e-77, Method: Composition-based stats. Identities = 186/351 (52%), Positives = 239/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL +N + E P +W A+ L +ER L+ + I ++ Sbjct: 14 LSERSAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEVIVDTIDQL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+EEDD ETS L ++ ++ +F + SG+ DS D YL++ Sbjct: 74 AQGLEDVAGLLELAVEEDDEDTFNETSLELDVLENKLGQLEFRRMFSGQYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E DG+ AG KSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTKSATIKIIGDYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS ++YP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ E + Sbjct: 254 VNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363 >gi|300718200|ref|YP_003743003.1| peptide chain release factor 2 [Erwinia billingiae Eb661] gi|299064036|emb|CAX61156.1| Peptide chain release factor 2 [Erwinia billingiae Eb661] Length = 348 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 183/347 (52%), Positives = 237/347 (68%), Gaps = 1/347 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + GG+FD+D +RL +N + E P +W A+ L +ER L+ + + +++ L Sbjct: 1 MAFSGGIFDYDAKKERLEEVNAELEQPDVWNEPDRAQALGKERSSLEAIVDTLDQMEQGL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LLELA+E DD ET L ++ ++ +F + SGE DS D Y+++ AG+G Sbjct: 61 EDVRGLLELAVEADDEETFNETIAELDVLEKKLGELEFRRMFSGEYDSADCYIDIQAGSG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWA ML+RMY RWAE + FKTE +E +GE AG KSATL I G A+GWL+ E G Sbjct: 121 GTEAQDWAGMLVRMYLRWAEAKGFKTEIIEESEGEVAGTKSATLRIIGDYAFGWLRTETG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T Sbjct: 181 VHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITH+PT V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++I Sbjct: 241 ESAVRITHLPTNTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQSLEDNKSDI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 GWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 301 GWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDRFIEASLKA 346 >gi|325578209|ref|ZP_08148344.1| peptide chain release factor RF2 [Haemophilus parainfluenzae ATCC 33392] gi|325159945|gb|EGC72074.1| peptide chain release factor RF2 [Haemophilus parainfluenzae ATCC 33392] Length = 364 Score = 291 bits (744), Expect = 1e-76, Method: Composition-based stats. Identities = 183/349 (52%), Positives = 248/349 (71%), Gaps = 1/349 (0%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 L C GG+FD+D V+RL +N + E P +W + +A+ L +ER L+ + IK ++ Sbjct: 15 SALLCFGGIFDFDAKVERLEEVNAELEQPDVWNDPEKAQALGKERVSLEQVVDTIKNLEQ 74 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 L D LLELA+E +D E L ++ ++ +F + SGE D+ D Y+++ AG Sbjct: 75 GLEDVEGLLELAVEAEDEETFNEAVAELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAG 134 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 +GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G A+GWL+ E Sbjct: 135 SGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIRVSGEYAFGWLRTE 194 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G+HRLVR SP+DSN+RRHTSF++++VYP +DD+I+IEI+ +D RID YRASGAGGQHVN Sbjct: 195 TGIHRLVRKSPFDSNNRRHTSFAAVFVYPEIDDNIDIEINPADLRIDVYRASGAGGQHVN 254 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T+SAVRITH+P+G+VVQCQ +RSQHKNK QA L+AKLYELELQK+ E +K+ Sbjct: 255 KTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKS 314 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 315 DIGWGSQIRSYVLDD-ARIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 362 >gi|78066892|ref|YP_369661.1| peptide chain release factor 2 [Burkholderia sp. 383] gi|77967637|gb|ABB09017.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia sp. 383] Length = 391 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 179/346 (51%), Positives = 249/346 (71%), Gaps = 1/346 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD+D RL+ +N + EDP++W + A+ L RE++ L+ ++ + + L Sbjct: 45 ASFGGIFDYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLR 104 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L L ELA EE D L + ++ ++ V +F + S AD N+ ++++ AGAGG Sbjct: 105 DALDLFELAREEGDEDTLVASEEDAAKLASRVGDIEFRRMFSNPADPNNCFIDIQAGAGG 164 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+L+ E G+ Sbjct: 165 TEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVSGEYAYGFLRTETGI 224 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH+N TD Sbjct: 225 HRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTD 284 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE+E++KR+ + ESSKT++G Sbjct: 285 SAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLESSKTDVG 344 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYVL VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 345 WGHQIRSYVLD-QSRVKDLRTNVEMSNTRAVLDGDLDDFISASLKQ 389 >gi|326575346|gb|EGE25274.1| peptide chain release factor 2 [Moraxella catarrhalis CO72] Length = 349 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 185/346 (53%), Positives = 244/346 (70%), Gaps = 1/346 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD ++ +RL +N + E+P +W N A + +E+ LD + I + +L Sbjct: 3 KSFGGIFDIESKKERLEEVNLELENPDIWNNPDLATKISKEKSVLDGIVGVIDGLSAKLD 62 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D +LELA+E+DD S+L + L VE +F + SGE D+N+ YL++ +G+GG Sbjct: 63 DAAAMLELAVEDDDESLLSDVQAELDDALNSVEELEFRRMFSGEMDANNCYLDIQSGSGG 122 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDWA MLLRMY RW E FK E LE+ +G AGIKSAT+++KG A+GWL+ E GV Sbjct: 123 TEAQDWAQMLLRMYLRWCESHGFKAEVLEVSEGGVAGIKSATIMVKGDYAFGWLRTEIGV 182 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DSN+ RHTSF++++V P +DD+I I+I+ +D RIDTYR+SGAGGQHVNTTD Sbjct: 183 HRLVRKSPFDSNNGRHTSFAAVFVSPEIDDNIGIDINPADLRIDTYRSSGAGGQHVNTTD 242 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH PTGVVV CQ ERSQH NK A MLRAKLYELE+QKR E E SK++IG Sbjct: 243 SAVRITHQPTGVVVACQNERSQHANKDTAMKMLRAKLYELEMQKRMEKQQALEESKSDIG 302 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYVL +KDLRT +E ++ + VL+GDLD F++A+L Sbjct: 303 WGSQIRSYVLDD-SRIKDLRTGVETSNTTAVLNGDLDKFIEASLKA 347 >gi|309973325|gb|ADO96526.1| Peptide chain release factor 2 (RF-2) [Haemophilus influenzae R2846] Length = 365 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 184/353 (52%), Positives = 249/353 (70%), Gaps = 1/353 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 + LS + + L G D+D V+RL +N + E P +W + +A+ L +ER L+ ++ IK Sbjct: 12 IDLSDRTSVLRGYLDFDAKVERLEEVNAELEQPDVWNDPDKAQALGKERVSLEQVVNTIK 71 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 ++ L D LLELA+E +D E L ++ ++E +F + SGE D+ D Y++ Sbjct: 72 NLEQGLEDVDGLLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVD 131 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G A+GW Sbjct: 132 LQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGW 191 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGG Sbjct: 192 LRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA L+AKLYELELQK+ E Sbjct: 252 QHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAME 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 312 DNKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 363 >gi|222150753|ref|YP_002559906.1| peptide chain release factor RF-2 [Macrococcus caseolyticus JCSC5402] gi|222119875|dbj|BAH17210.1| peptide chain release factor RF-2 [Macrococcus caseolyticus JCSC5402] Length = 350 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 177/349 (50%), Positives = 234/349 (67%), Gaps = 1/349 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + LGGLFD + + DP W + +A+ ++ + L + + +++ L Sbjct: 1 MTVLGGLFDLEEKETNIKEYEEMMADPDFWNDGDKAQDIINKNNALKSVVQEFSTLEEGL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 ++ +L E+ EE D QE + L ++ + + LLSGE D+N+A LE+H GAG Sbjct: 61 ENSEVLFEMYKEESDEDTHQELIEQLNTLQQIANDFELKMLLSGEFDANNAILELHPGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTESQDW MLLRMY R+A+K+ FK E ++ G+EAGIKS TLLIKG NAYG+LK E+G Sbjct: 121 GTESQDWGEMLLRMYQRFADKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 VHRLVRISP+DS+ RRHTSF S V P +D+IEIEI+ D +IDTYRASGAGGQHVNT Sbjct: 181 VHRLVRISPFDSSGRRHTSFVSCEVTPEFDNDNIEIEINSEDIKIDTYRASGAGGQHVNT 240 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITH PTG+VV CQ ERSQ KN+ QA ML+AKLY+ +++++E + E Sbjct: 241 TDSAVRITHQPTGIVVTCQNERSQIKNREQAMKMLKAKLYQKKIEEQEAELAAIRGEQKE 300 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IGWG QIRSYV PY MVKD RTN+E + + V+DGD+D F+ A L + Sbjct: 301 IGWGSQIRSYVFHPYSMVKDHRTNVETGNTNAVMDGDIDLFIDAYLKSQ 349 >gi|170733471|ref|YP_001765418.1| peptide chain release factor 2 [Burkholderia cenocepacia MC0-3] gi|169816713|gb|ACA91296.1| peptide chain release factor 2 [Burkholderia cenocepacia MC0-3] Length = 391 Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats. Identities = 180/346 (52%), Positives = 250/346 (72%), Gaps = 1/346 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD+D RL+ +N + EDP++W + A+ L RE++ L+ ++ + + L Sbjct: 45 ASFGGIFDYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLR 104 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L L ELA EE D L + D+ +++ V +F + S AD N+ ++++ AGAGG Sbjct: 105 DALDLFELAREEGDEDTLLASEDDAAKLEARVGDIEFRRMFSNPADPNNCFIDIQAGAGG 164 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+L+ E G+ Sbjct: 165 TEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGFLRTETGI 224 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH+N TD Sbjct: 225 HRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTD 284 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE+E++KR+ + ESSKT++G Sbjct: 285 SAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLESSKTDVG 344 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYVL VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 345 WGHQIRSYVLD-QSRVKDLRTNVEMSNTRAVLDGDLDDFISASLKQ 389 >gi|39546356|ref|NP_461957.2| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|267995195|gb|ACY90080.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|323131397|gb|ADX18827.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 358 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 187/344 (54%), Positives = 238/344 (69%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+D +RL +N + E P +W A+ L +ER L+ + + ++ L D Sbjct: 14 LGGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQMTQGLDDV 73 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+E DD E L ++ ++ +F + SGE DS D YL++ AG+GGTE Sbjct: 74 SGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTE 133 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA+MLLRMY RWAE R FKTE +E +GE AGIKSAT+ I G AYGWL+ E GVHR Sbjct: 134 AQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLRTETGVHR 193 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SA Sbjct: 194 LVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESA 253 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG Sbjct: 254 VRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWG 313 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 314 SQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 356 >gi|107028703|ref|YP_625798.1| peptide chain release factor 2 [Burkholderia cenocepacia AU 1054] gi|116690138|ref|YP_835761.1| peptide chain release factor 2 [Burkholderia cenocepacia HI2424] gi|105897867|gb|ABF80825.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia cenocepacia AU 1054] gi|116648227|gb|ABK08868.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia cenocepacia HI2424] Length = 391 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 180/346 (52%), Positives = 250/346 (72%), Gaps = 1/346 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD+D RL+ +N + EDP++W + A+ L RE++ L+ ++ + + L Sbjct: 45 ASFGGIFDYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLR 104 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L L ELA EE D L + D+ +++ V +F + S AD N+ ++++ AGAGG Sbjct: 105 DALDLFELAREEGDEDTLLASEDDAAKLEARVGDIEFRRMFSNPADPNNCFIDIQAGAGG 164 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+L+ E G+ Sbjct: 165 TEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGFLRTETGI 224 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH+N TD Sbjct: 225 HRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTD 284 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE+E++KR+ + ESSKT++G Sbjct: 285 SAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLESSKTDVG 344 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYVL VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 345 WGHQIRSYVLD-QSRVKDLRTNVEMSNTRAVLDGDLDDFISASLKQ 389 >gi|307129433|ref|YP_003881449.1| putative peptide chain release factor 2 [Dickeya dadantii 3937] gi|306526962|gb|ADM96892.1| putative peptide chain release factor 2 [Dickeya dadantii 3937] Length = 365 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 188/351 (53%), Positives = 240/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL +N + E P +W A+ L +ER L+ + I ++ Sbjct: 14 LSERTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEMIVDTIDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+EEDD +T L +++ ++ +F + SGE DS D YL++ Sbjct: 74 VQGLDDVSGLLELAVEEDDEDTFNDTVAELDQLESKLGQLEFRRMFSGEYDSADCYLDLQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E +GE AGIKSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESEGEVAGIKSATIKIMGEYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ E + Sbjct: 254 VNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQALEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQSVLDGDLDKFIEASLKA 363 >gi|256821963|ref|YP_003145926.1| peptide chain release factor 2 [Kangiella koreensis DSM 16069] gi|256795502|gb|ACV26158.1| bacterial peptide chain release factor 2 (bRF- 2) [Kangiella koreensis DSM 16069] Length = 365 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 186/351 (52%), Positives = 258/351 (73%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +S ++ L G D+D+ +RL + + E P +W + A+ L +ER L+ ++ IK++ Sbjct: 14 MSERVTTLRGYLDFDSKQERLVEVERELEQPDVWNDQERAQSLGQERAKLETVVNTIKDL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + DN LLEL++EEDD + E + ++++ +E +F + SGE D N+AYL++ Sbjct: 74 EAGIDDNQELLELSVEEDDAESVAEIENEVKQLNTSLEKLEFRRMFSGEMDENNAYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA++LLRMY RW E R FK E E DG+ AGIKSAT+ ++G AYGWL+ Sbjct: 134 AGSGGTEAQDWASILLRMYLRWCESRGFKAEVTEESDGDVAGIKSATIRVEGEYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSF+S++VYP VDDSI+IE++ +D R+DTYRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGNRRHTSFASVFVYPEVDDSIDIEVNPADLRVDTYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSA+R+THIPTG+VVQCQ +RSQHKN+AQA +M++AKLYELE+QK+ E E + Sbjct: 254 VNKTDSAIRLTHIPTGIVVQCQNDRSQHKNRAQAMSMMKAKLYELEMQKQREEQQALEDT 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT E ++ + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLD-QSRIKDLRTGHESSNTTAVLDGDLDSFIEASLKA 363 >gi|271499213|ref|YP_003332238.1| hypothetical protein Dd586_0640 [Dickeya dadantii Ech586] gi|270342768|gb|ACZ75533.1| hypothetical protein Dd586_0640 [Dickeya dadantii Ech586] Length = 365 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 187/351 (53%), Positives = 237/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL +N + E P +W A+ L +ER L+ + I ++ Sbjct: 14 LSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEMIVDTIDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 VQGLDDVAGLLELAVEADDEETFNEAIAELDLLEDKLGQLEFRRMFSGEYDSADCYLDLQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E +GE AGIKSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESEGEVAGIKSATIKIMGDYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ E + Sbjct: 254 VNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQALEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQSVLDGDLDKFIEASLKA 363 >gi|150260100|ref|ZP_01916828.1| peptide chain release factor 2 [Yersinia pestis CA88-4125] gi|153948098|ref|YP_001399866.1| peptide chain release factor 2 [Yersinia pseudotuberculosis IP 31758] gi|218928062|ref|YP_002345937.1| peptide chain release factor 2 [Yersinia pestis CO92] gi|229837575|ref|ZP_04457737.1| Peptide chain release factor 2 [Yersinia pestis Pestoides A] gi|229840798|ref|ZP_04460957.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842643|ref|ZP_04462798.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis str. India 195] gi|229903704|ref|ZP_04518817.1| Peptide chain release factor 2 [Yersinia pestis Nepal516] gi|257168082|ref|NP_670572.2| peptide chain release factor 2 [Yersinia pestis KIM 10] gi|166977375|sp|A7FF38|RF2_YERP3 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|149289508|gb|EDM39585.1| peptide chain release factor 2 [Yersinia pestis CA88-4125] gi|152959593|gb|ABS47054.1| peptide chain release factor 2 [Yersinia pseudotuberculosis IP 31758] gi|229679474|gb|EEO75577.1| Peptide chain release factor 2 [Yersinia pestis Nepal516] gi|229690953|gb|EEO83007.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis str. India 195] gi|229697164|gb|EEO87211.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229704263|gb|EEO91274.1| Peptide chain release factor 2 [Yersinia pestis Pestoides A] gi|320014035|gb|ADV97606.1| Peptide chain release factor 2 [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 365 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 186/351 (52%), Positives = 240/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL +N + E P +W A+ L +ER L+ ++ I ++ Sbjct: 14 LSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSTLEEIVTTIDQL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D LLELA+E DD ET L+ + ++ +F + SGE D + YL++ Sbjct: 74 EQGLEDVSGLLELAVEADDEETFNETIAELEVLDGKLGQLEFRRMFSGEYDRANCYLDLQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E DG+ AG+KSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAESRGFKTEIIEESDGDVAGLKSATVKIIGEYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ + E + Sbjct: 254 VNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363 >gi|16126117|ref|NP_420681.1| peptide chain release factor 2 [Caulobacter crescentus CB15] gi|221234887|ref|YP_002517323.1| peptide chain release factor 2 [Caulobacter crescentus NA1000] gi|24638156|sp|Q9A752|RF2_CAUCR RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|254790910|sp|B8GWM3|RF2_CAUCN RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|13423319|gb|AAK23849.1| peptide chain release factor 2 [Caulobacter crescentus CB15] gi|220964059|gb|ACL95415.1| bacterial peptide chain Release factor 2 (RF-2) [Caulobacter crescentus NA1000] Length = 371 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 212/347 (61%), Positives = 256/347 (73%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 +C GG+FDWD A+++L LN + EDP LW EA+ + RER +L + ++ I+ L Sbjct: 14 DCSGGVFDWDVALRKLDELNARVEDPTLWDRPSEAQAVSRERANLAAKVEAVQSIERDLK 73 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L ELA E D L + L+ +K + E+LLSGEAD ND Y+E+++GAGG Sbjct: 74 DALEYAELAEMESDEDSLNDARAQLKSLKERAGRAELEALLSGEADGNDCYVEINSGAGG 133 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TES DWA +LLRMYTRWA TE +E DG++AGIKSATLL+KG NAYGWLK E GV Sbjct: 134 TESCDWAGILLRMYTRWANAHGMTTELIEETDGDQAGIKSATLLVKGANAYGWLKTEAGV 193 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVRISPYDS++RRHTSF+S WVYPVVDD+IEIEI+ SD R DTYRASGAGGQH+N TD Sbjct: 194 HRLVRISPYDSSARRHTSFASAWVYPVVDDNIEIEINPSDVRTDTYRASGAGGQHINKTD 253 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+ V CQ RSQH+N+ +AW MLRA+LYE ELQKRE E KT+IG Sbjct: 254 SAVRLTHIPTGIAVACQAGRSQHQNREEAWKMLRARLYEAELQKREAAQQALEDQKTDIG 313 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYVLQPYQMVKDLRTN+E + VLDGDLD FM A+LA + Sbjct: 314 WGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDAFMAASLAQR 360 >gi|304386240|ref|ZP_07368573.1| peptide chain release factor RF2 [Pediococcus acidilactici DSM 20284] gi|304327597|gb|EFL94824.1| peptide chain release factor RF2 [Pediococcus acidilactici DSM 20284] Length = 362 Score = 290 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 174/355 (49%), Positives = 232/355 (65%), Gaps = 1/355 (0%) Query: 1 MKL-SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59 MK+ ++ GGLFD D + +S K +P W + +A+ ++ E L Sbjct: 1 MKICKKRSLTSGGLFDLDALNESISVNEAKMAEPDFWNDQEKAQKIINETNVLKAKYDNF 60 Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 K + D + + + LEL E D + E D L + + + LL+G+ D+N+A L Sbjct: 61 KNLTDHVENLEVTLELLEMEADPDVQAEFEDELSQTAKLLRDYRLGLLLNGKYDANNAIL 120 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 E+H GAGGTESQDW +MLLRMYTRWAE+ +FK + + GE AGI S T+ + G NAYG Sbjct: 121 EIHPGAGGTESQDWGSMLLRMYTRWAEQHQFKVQIEDYQAGEVAGISSVTIRVMGHNAYG 180 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 +L+ E+GVHRLVR+SP+DS RRHTSF+S+ V P +DDS+E+ I+ D R+D YR+SGAG Sbjct: 181 YLRSEKGVHRLVRLSPFDSAGRRHTSFASVDVMPELDDSVEVNINPDDLRVDVYRSSGAG 240 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQH+N T SAVRITH+PTG+VV Q ERSQ +N+ A NML+AKL+ELE QK+ E Sbjct: 241 GQHINKTSSAVRITHLPTGIVVASQAERSQLQNRVTAMNMLKAKLFELEEQKKAEEKAKL 300 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 E ++ EIGWG QIRSYV PY MVKD RTN+E + V+DGDLDDF+ A L K Sbjct: 301 EGTQLEIGWGSQIRSYVFHPYSMVKDHRTNLETANVQGVMDGDLDDFINAYLQWK 355 >gi|227510661|ref|ZP_03940710.1| peptide chain release factor 2 [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190313|gb|EEI70380.1| peptide chain release factor 2 [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 354 Score = 290 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 173/345 (50%), Positives = 226/345 (65%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGGLFD+D + +S K +P W + A+ L+ E L + + L D Sbjct: 3 LGGLFDFDALSESISINEAKMAEPGFWDDQQAAQKLIDETNQLKTKRDRFDTLTNELDDL 62 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 + LEL E+ D + E ++K +++ Q LL+G+ D N+A LE+H GAGGTE Sbjct: 63 KVTLELISEDPDSGMQDEFIGEADKLKKQLDRYQLGLLLNGKYDHNNAILEIHPGAGGTE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDW +MLLRMYTRWAE FK + L+ GE AGI S ++LI G NAYG+L+ E+GVHR Sbjct: 123 AQDWGSMLLRMYTRWAETHDFKVDVLDYQVGEVAGINSVSILINGENAYGYLRSEKGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+DS RRHTSF+S+ V P +DD + I+IS + ++D YRASGAGGQHVN T SA Sbjct: 183 LVRISPFDSAGRRHTSFASVDVMPELDDDVSIKISPDELKVDVYRASGAGGQHVNKTSSA 242 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG+VV Q +RSQ +N+ A NML++KLYELE QK+ E E + +IGWG Sbjct: 243 VRITHIPTGIVVASQAQRSQLQNRQTALNMLKSKLYELEEQKKAEEKAKIEGEQLDIGWG 302 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QIRSYV PY MVKD RTN E + + V+DGDLD F+ A L + Sbjct: 303 SQIRSYVFHPYSMVKDHRTNYETANVNGVMDGDLDPFINAYLQWQ 347 >gi|206560551|ref|YP_002231316.1| peptide chain release factor 2 [Burkholderia cenocepacia J2315] gi|238693117|sp|B4EDB1|RF2_BURCJ RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|198036593|emb|CAR52490.1| peptide chain release factor 2 [Burkholderia cenocepacia J2315] Length = 367 Score = 290 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 179/353 (50%), Positives = 251/353 (71%), Gaps = 1/353 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 + L + L G D+D RL+ +N + EDP++W + A+ L RE++ L+ ++ + Sbjct: 14 LDLRNRAGELRGYLDYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLT 73 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 + L D L L ELA EE D L + ++ +++ V +F + S AD N+ +++ Sbjct: 74 ALDSDLRDALDLFELAREEGDEDTLLASEEDAAKLEARVGDIEFRRMFSNPADPNNCFID 133 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+ Sbjct: 134 IQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGF 193 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGG Sbjct: 194 LRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGG 253 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE+E++KR+ + E Sbjct: 254 QHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLE 313 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 SSKT++GWG QIRSYVL VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 314 SSKTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTRAVLDGDLDDFISASLKQ 365 >gi|53719890|ref|YP_108876.1| peptide chain release factor 2 [Burkholderia pseudomallei K96243] gi|53723794|ref|YP_103319.1| peptide chain release factor 2 [Burkholderia mallei ATCC 23344] gi|226830773|ref|YP_001066897.2| peptide chain release factor 2, programmed [Burkholderia pseudomallei 1106a] gi|254200276|ref|ZP_04906642.1| peptide chain release factor 2 [Burkholderia mallei FMH] gi|254209352|ref|ZP_04915698.1| peptide chain release factor 2 [Burkholderia mallei JHU] gi|81604734|sp|Q62J00|RF2_BURMA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|81607820|sp|Q63SP0|RF2_BURPS RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|229576668|sp|A3NX26|RF2_BURP0 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|52210304|emb|CAH36283.1| peptide chain release factor 2 [Burkholderia pseudomallei K96243] gi|52427217|gb|AAU47810.1| peptide chain release factor 2, programmed frameshift [Burkholderia mallei ATCC 23344] gi|147749872|gb|EDK56946.1| peptide chain release factor 2 [Burkholderia mallei FMH] gi|147750125|gb|EDK57196.1| peptide chain release factor 2 [Burkholderia mallei JHU] gi|213385360|gb|ABN92528.3| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei 1106a] Length = 367 Score = 290 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 180/351 (51%), Positives = 251/351 (71%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L R+ L G D+D +RL+ +N + EDP++W + A+ L RE++ L++ ++ + + Sbjct: 16 LRRRAGELRGYLDYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLESVVTTLTAL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L ELA EE D L T + +++ V +F + S AD N+ ++++ Sbjct: 76 DNDLRDAQDLFELAHEEGDEETLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++L+E EL+KR+ + ESS Sbjct: 256 INKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESS 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KT++GWG QIRSYVL VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 316 KTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTKAVLDGDLDDFISASLKQ 365 >gi|322831509|ref|YP_004211536.1| Peptide chain release factor 2 [Rahnella sp. Y9602] gi|321166710|gb|ADW72409.1| Peptide chain release factor 2 [Rahnella sp. Y9602] Length = 365 Score = 290 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 188/351 (53%), Positives = 236/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL +N + E P +W A+ L +ER L+ + I E+ Sbjct: 14 LSERTVVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVETIDEL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 D LLELA+E DD ET L + ++E +F + SGE DS YL++ Sbjct: 74 LQGAEDVTGLLELAVEADDEDTFNETVAELDVLTAKLEQLEFRRMFSGEYDSASCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E DGE AG+KSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEAKGFKTEVIEESDGEVAGLKSATIKIIGDYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD IEIEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIEIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH+PT +V QCQ +RSQHKNK QA +RAKLYE E+QK+ E + Sbjct: 254 VNKTESAVRITHLPTNIVTQCQNDRSQHKNKDQAMKQMRAKLYEYEMQKKNADKQQLEDT 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363 >gi|312947424|gb|ADR28251.1| peptide chain release factor 2 [Escherichia coli O83:H1 str. NRG 857C] Length = 357 Score = 290 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 186/344 (54%), Positives = 237/344 (68%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+D +RL +N + E P +W A+ L +ER L+ + + +++ L D Sbjct: 13 LGGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDV 72 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+E DD E L ++ ++ +F + SGE DS D YL++ AG+GGTE Sbjct: 73 SGLLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTE 132 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ E GVHR Sbjct: 133 AQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHR 192 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SA Sbjct: 193 LVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESA 252 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG Sbjct: 253 VRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWG 312 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 313 SQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 355 >gi|251790993|ref|YP_003005714.1| hypothetical protein Dd1591_3423 [Dickeya zeae Ech1591] gi|247539614|gb|ACT08235.1| hypothetical protein Dd1591_3423 [Dickeya zeae Ech1591] Length = 365 Score = 290 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 188/351 (53%), Positives = 240/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL +N + E P +W A+ L +ER L+ + I ++ Sbjct: 14 LSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEMIVDTIDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+EEDD +T L +++ ++ +F + SGE DS D YL++ Sbjct: 74 VQGLDDVAGLLELAVEEDDEDTFNDTVAELDQLESKLGQLEFRRMFSGEYDSADCYLDLQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E +GE AGIKSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESEGEVAGIKSATIKIMGDYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ E + Sbjct: 254 VNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQSVLDGDLDKFIEASLKA 363 >gi|160876721|ref|YP_001556037.1| peptide chain release factor 2 [Shewanella baltica OS195] gi|160862243|gb|ABX50777.1| peptide chain release factor 2 [Shewanella baltica OS195] Length = 352 Score = 290 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 174/343 (50%), Positives = 233/343 (67%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+D +RL + + E +W + A+ L +ER L+ + I ++ L D Sbjct: 8 LGGIFDYDAKNERLEEVTRELESSEVWNDPERAQALGKERASLEAVVKTIDDMDSGLEDV 67 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+EE+D ETS L ++ + +F + SG D+++ YL++ +G+GGTE Sbjct: 68 EGLLELAIEEEDEDTFNETSKELDYLESRLADLEFRRMFSGPQDASNCYLDIQSGSGGTE 127 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANM+LRMY RW E F E +E+ DG+ AGIK AT+ G A+GWL+ E GVHR Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS+ RRHTSF S++VYP +DD I I+I+ SD RIDTYRASGAGGQHVN T+SA Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPSDLRIDTYRASGAGGQHVNKTESA 247 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 +RITH+PT VVQCQ +RSQHKNK A L+AKL+ELE+ K+ E +K++IGWG Sbjct: 248 IRITHLPTNTVVQCQNDRSQHKNKDAAMKQLKAKLFELEMLKQNADKQAAEDAKSDIGWG 307 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 308 SQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDKFIEASLK 349 >gi|254191408|ref|ZP_04897912.1| peptide chain release factor 2 [Burkholderia pseudomallei Pasteur 52237] gi|157939080|gb|EDO94750.1| peptide chain release factor 2 [Burkholderia pseudomallei Pasteur 52237] Length = 367 Score = 290 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 180/351 (51%), Positives = 251/351 (71%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L R+ L G D+D +RL+ +N + EDP++W + A+ L RE++ L++ ++ + + Sbjct: 16 LRRRAGELRGYLDYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLESVVTTLTAL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L ELA EE D L T + +++ V +F + S AD N+ ++++ Sbjct: 76 DNDLRDAQALFELAHEEGDEETLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++L+E EL+KR+ + ESS Sbjct: 256 INKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESS 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KT++GWG QIRSYVL VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 316 KTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTKAVLDGDLDDFISASLKQ 365 >gi|114320956|ref|YP_742639.1| peptide chain release factor 2 [Alkalilimnicola ehrlichii MLHE-1] gi|114227350|gb|ABI57149.1| bacterial peptide chain release factor 2 (bRF-2) [Alkalilimnicola ehrlichii MLHE-1] Length = 354 Score = 290 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 176/344 (51%), Positives = 244/344 (70%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+D +RL + + E P +W + A+ L RER L+ + + + L D Sbjct: 10 LGGIFDYDLKRERLEEVTRELEQPEVWNDPERAQSLGRERAQLEGLVETFERLDSVLGDA 69 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLE+A +E D + +L + E++ +F + SGE D +A++++ AGAGGTE Sbjct: 70 DELLEMAADEGDEETVAALQSDLGDCERELQKLEFRRMFSGEMDPANAFMDIQAGAGGTE 129 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANMLLRMY RW E+ FKTE +E+ +G+EAGIKSAT+ +G A+GWL+ E G+HR Sbjct: 130 AQDWANMLLRMYLRWGERHGFKTEIIELSEGDEAGIKSATVKFEGEYAFGWLRTEIGIHR 189 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS +RRHTSF+S++V P VDD ++I+I+ +D R+D YRASGAGGQHVN T+SA Sbjct: 190 LVRKSPFDSGNRRHTSFASVFVSPEVDDDVDIDINPADLRVDVYRASGAGGQHVNRTESA 249 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+P+G+VVQCQQ+RSQHKN+A A L++KL+ELE+QKR + A E +K++IGWG Sbjct: 250 VRITHMPSGIVVQCQQDRSQHKNRATAMKQLKSKLFELEMQKRRDEAEAVEGTKSDIGWG 309 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 310 NQIRSYVLD-QSRIKDLRTGVEVGNTQAVLDGDLDQFIEASLKA 352 >gi|260581088|ref|ZP_05848909.1| peptide chain release factor 2 [Haemophilus influenzae RdAW] gi|260092217|gb|EEW76159.1| peptide chain release factor 2 [Haemophilus influenzae RdAW] Length = 351 Score = 290 bits (741), Expect = 3e-76, Method: Composition-based stats. Identities = 185/347 (53%), Positives = 248/347 (71%), Gaps = 1/347 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L C GG+FD+D V+RL +N + E P +W + +A+ L +ER L+ ++ IK ++ L Sbjct: 4 LQCFGGIFDFDAKVERLEEVNGELEQPDVWNDPDKAQALGKERVSLEQVVNTIKNLEQGL 63 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LLELA+E +D E L ++ ++E +F + SGE D+ D Y+++ AG+G Sbjct: 64 EDVDGLLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVDLQAGSG 123 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G A+GWL+ E G Sbjct: 124 GTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETG 183 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T Sbjct: 184 IHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKT 243 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITH+P+G+VVQCQ +RSQHKNK QA L+AKLYELELQK+ E +K++I Sbjct: 244 ESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDI 303 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 GWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 304 GWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 349 >gi|262274920|ref|ZP_06052731.1| peptide chain release factor 2 [Grimontia hollisae CIP 101886] gi|262221483|gb|EEY72797.1| peptide chain release factor 2 [Grimontia hollisae CIP 101886] Length = 347 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 179/344 (52%), Positives = 242/344 (70%), Gaps = 1/344 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGG+FD+D +RL +N + E P +W + A+ L RER L+ + I ++ Sbjct: 2 SLGGIFDYDAKKERLEEVNAELEQPDVWNDPERAQALGRERASLEAVVETIDQLAQGGEY 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 LLELA+EE+D E L ++ ++ +F + SG+ D++D Y+++ AG+GGT Sbjct: 62 ITELLELAVEENDQETFDEIEPELNDLEDKLAKLEFRRMFSGDHDASDCYIDLQAGSGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDW +M+LRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G AYGWL+ E GVH Sbjct: 122 EAQDWTSMMLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRISGEYAYGWLRTETGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DS RRHTSF+S ++YP VD++I+I+I+ +D RID YRASGAGGQHVNTT+S Sbjct: 182 RLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIDINPADLRIDVYRASGAGGQHVNTTES 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITHIPT VVQCQ +RSQHKNK QA LRAKL+ELELQK+ E++K++IGW Sbjct: 242 AVRITHIPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEAAKSDIGW 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 302 GSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKFIEASLK 344 >gi|330447415|ref|ZP_08311064.1| peptide chain release factor 2 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491606|dbj|GAA05561.1| peptide chain release factor 2 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 347 Score = 289 bits (740), Expect = 3e-76, Method: Composition-based stats. Identities = 177/344 (51%), Positives = 239/344 (69%), Gaps = 1/344 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGG FD+D +RL +N + E P +W A+ L +ER L+ + I ++ + D Sbjct: 2 SLGGTFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERASLEAVVETIDQLDQGVED 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 LLELA+EE+D E L ++ ++ +F + +G+ D +D Y+++ AG+GGT Sbjct: 62 VEGLLELAVEEEDQETFDEIEPELAELEEKLAKLEFRRMFAGDHDPSDCYVDLQAGSGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDW +M+LRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ + G AYGWL+ E GVH Sbjct: 122 EAQDWTSMMLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATIRVSGEYAYGWLRTETGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DS RRHTSF+S +VYP +DD+I I+I+ SD RID YRASGAGGQHVNTT+S Sbjct: 182 RLVRKSPFDSGGRRHTSFASAFVYPEIDDNIAIDINPSDLRIDVYRASGAGGQHVNTTES 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PT +VVQCQ +RSQHKNK QA L+AKL+E ELQK+ E SK++IGW Sbjct: 242 AVRITHLPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEFELQKQNAEKQANEDSKSDIGW 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 302 GSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLK 344 >gi|170725301|ref|YP_001759327.1| hypothetical protein Swoo_0939 [Shewanella woodyi ATCC 51908] gi|238688657|sp|B1KFR6|RF2_SHEWM RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|169810648|gb|ACA85232.1| hypothetical protein Swoo_0939 [Shewanella woodyi ATCC 51908] Length = 365 Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats. Identities = 173/350 (49%), Positives = 237/350 (67%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + L G+FD+D +RL ++ + E +W N A+ L +ER L+ + I ++ Sbjct: 14 LADRTLLLRGIFDYDAKKERLEEVSAELESSEVWNNPENAQALGKERSALELVVKTIDDM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D L+ELA+EE+D + S L ++ +E +F + SG D +D YL++ Sbjct: 74 DSGLEDVEGLVELAVEEEDEETFADASSELDALEKRLEELEFRRMFSGPHDISDCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +G+GGTE+QDWANM+LRM+ RW E +K E +E+ DG+ AGIK AT+ G A+G L+ Sbjct: 134 SGSGGTEAQDWANMVLRMFLRWGEAHDYKPELIEVTDGDVAGIKGATIKFTGEYAFGSLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SA+RITH+PT VVQCQ +RSQHKN+ A L+AKLYELE+ K+ E + Sbjct: 254 VNKTESAIRITHVPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNADKQQAEDA 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-ARIKDLRTGVESRNTQSVLDGDLDKFIEASLK 362 >gi|229916623|ref|YP_002885269.1| peptide chain release factor 2 [Exiguobacterium sp. AT1b] gi|259585245|sp|C4L5K9|RF2_EXISA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|229468052|gb|ACQ69824.1| peptide chain release factor 2 [Exiguobacterium sp. AT1b] Length = 366 Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats. Identities = 175/350 (50%), Positives = 234/350 (66%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++++L + R++ L + P W N +A+ ++ E L + +++ Sbjct: 13 MAKRLENYRASLNLTEKEARIAELENEMTYPDFWDNQEKAQKVIDESNGLKAMVDKYQDL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ D + LEL EE D + +E +++Q +K E + + E LL+G D+N+A LE+H Sbjct: 73 ANQHEDGEVTLELIKEEPDAEMQEELGESIQALKKEFDDFELEILLNGPYDANNAILELH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+MLLRMY R+A+K+ +K E ++ GEEAG+KS TL I G NAYG+LK Sbjct: 133 PGAGGTESQDWASMLLRMYQRFADKQGWKVETVDYLPGEEAGVKSVTLRIVGHNAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+G+HRLVRISP+DS+ RRHTSF S V P DD IEIE+ D RIDTYRASGAGGQH Sbjct: 193 AEKGIHRLVRISPFDSSGRRHTSFVSCDVMPEFDDDIEIEVRTEDLRIDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +NTTDSAVRITH+PTGVVV CQ ERSQ KN+ A ML+AKLY+ EL +++ + Sbjct: 253 INTTDSAVRITHVPTGVVVSCQTERSQIKNRESAMKMLKAKLYQRELDEQQRKLDEIRGE 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 KT+IGWG QIRSYV PY MVKD RTN E + S V+DGD+ F+ A L Sbjct: 313 KTDIGWGSQIRSYVFHPYSMVKDHRTNYEVGNTSGVMDGDVMPFIDAYLR 362 >gi|39997376|ref|NP_953327.1| peptide chain release factor 2 [Geobacter sulfurreducens PCA] gi|39984267|gb|AAR35654.1| peptide chain release factor 2, programmed frameshift [Geobacter sulfurreducens PCA] gi|307634992|gb|ADI85036.2| peptide chain release factor 2 [Geobacter sulfurreducens KN400] Length = 372 Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats. Identities = 182/348 (52%), Positives = 241/348 (69%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 ++ L G D D+ + + L + P W N EA+ ++RER ++ I + Sbjct: 14 ERIAKLRGSLDIDSKREDIQELEAQIAAPGFWDNNEEAQKVLRERTRIEKLIDLWDRLNR 73 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 + D +L+EL E D + L E ++ EVE +F+ +LSG D N ++ ++AG Sbjct: 74 QADDIRVLIELGEEAQDEATLDEVRALNDSLEREVEGAEFQRMLSGPHDKNSCFVSINAG 133 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGGTE+QDWA MLLRMY R+ E++ +KTE + G+EAG+KSAT + G AYG+LK E Sbjct: 134 AGGTEAQDWAEMLLRMYLRYCERKGWKTEITDFQAGDEAGVKSATFTVDGEYAYGYLKAE 193 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G+HRLVRISP+DSN+RRHTSF+S++V+P ++D IEI+I+ESD R+DTYR+SGAGGQHVN Sbjct: 194 AGIHRLVRISPFDSNARRHTSFASVFVFPEIEDDIEIKIAESDLRVDTYRSSGAGGQHVN 253 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVR+TH+PTG+VV CQ ERSQH NKA A MLRAKLYE ELQ+RE A+ K Sbjct: 254 TTDSAVRLTHLPTGIVVACQCERSQHLNKATALRMLRAKLYEKELQEREVQASELAGEKK 313 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IGWG QIRSYVL PY+MVKDLRT +E +P VLDG L+DF+ A L Sbjct: 314 DIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGALEDFVVAFLM 361 >gi|296112892|ref|YP_003626830.1| peptide chain release factor 2 [Moraxella catarrhalis RH4] gi|295920586|gb|ADG60937.1| peptide chain release factor 2 [Moraxella catarrhalis RH4] gi|326564445|gb|EGE14672.1| peptide chain release factor 2 [Moraxella catarrhalis 103P14B1] gi|326566640|gb|EGE16781.1| peptide chain release factor 2 [Moraxella catarrhalis 12P80B1] gi|326567583|gb|EGE17698.1| peptide chain release factor 2 [Moraxella catarrhalis BC1] gi|326569431|gb|EGE19491.1| peptide chain release factor 2 [Moraxella catarrhalis BC8] gi|326571371|gb|EGE21386.1| peptide chain release factor 2 [Moraxella catarrhalis BC7] gi|326576569|gb|EGE26476.1| peptide chain release factor 2 [Moraxella catarrhalis 101P30B1] gi|326577414|gb|EGE27298.1| peptide chain release factor 2 [Moraxella catarrhalis O35E] Length = 349 Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats. Identities = 185/346 (53%), Positives = 245/346 (70%), Gaps = 1/346 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD ++ +RL +N + E+P +W N A + +E+ LD + I + +L Sbjct: 3 KSFGGIFDIESKKERLEEVNLELENPDIWNNPDLATKISKEKSVLDGIVGVIDGLSAKLD 62 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D +LELA+E+DD S+L + L VE +F + SGE D+N+ YL++ +G+GG Sbjct: 63 DAAAMLELAVEDDDESLLSDVQAELDDALNSVEELEFRRMFSGEMDANNCYLDIQSGSGG 122 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDWA MLLRMY RW E FK E LE+ +G AGIKSAT+++KG A+GWL+ E GV Sbjct: 123 TEAQDWAQMLLRMYLRWCESHGFKAEVLEVSEGGVAGIKSATIMVKGDYAFGWLRTEIGV 182 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DSN+ RHTSF++++V P +DD+I+I+I+ +D RIDTYR+SGAGGQHVNTTD Sbjct: 183 HRLVRKSPFDSNNGRHTSFAAVFVSPEIDDNIDIDINPADLRIDTYRSSGAGGQHVNTTD 242 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH PTGVVV CQ ERSQH NK A MLRAKLYELE+QKR E E SK++IG Sbjct: 243 SAVRITHQPTGVVVACQNERSQHANKDTAMKMLRAKLYELEMQKRMEKQQALEESKSDIG 302 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYVL +KDLRT +E ++ + VL+GDLD F++A+L Sbjct: 303 WGSQIRSYVLDD-SRIKDLRTGVETSNTTAVLNGDLDKFIEASLKA 347 >gi|226314892|ref|YP_002774788.1| peptide chain release factor 2 [Brevibacillus brevis NBRC 100599] gi|226097842|dbj|BAH46284.1| peptide chain release factor 2 [Brevibacillus brevis NBRC 100599] Length = 370 Score = 289 bits (740), Expect = 4e-76, Method: Composition-based stats. Identities = 163/352 (46%), Positives = 235/352 (66%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++++L + G D +R+ L + P W + A+ + E + + + + ++ Sbjct: 16 MAKRLADIRGSLDLPVKQERIGELEERMLAPDFWDDNDAAQKTISELNAIKSLVETMAKL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D ++LEL +EE D S++ + D+ Q ++ E + E LLS E D N+A LE+H Sbjct: 76 DSQYEDLQVMLELVIEEGDSSLIPDLYDSTQELRKSFESFELELLLSDEYDKNNAILELH 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+MLLRMYTRW + + FK E L+ G+EAG+KS TLLIKG NAYG+LK Sbjct: 136 PGAGGTESQDWASMLLRMYTRWGDAKGFKVETLDYLPGDEAGVKSVTLLIKGYNAYGYLK 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+D++ RRHTSF S V P ++D ++I D ++DTYR+SGAGGQH Sbjct: 196 SEKGVHRLVRISPFDASGRRHTSFVSCNVLPEIEDDNVVDIRTEDLKVDTYRSSGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +NTTDSAVRITH+P+G+VV CQ ERSQ KN+ +A ML A+L+E + +++E+ + Sbjct: 256 INTTDSAVRITHLPSGIVVTCQTERSQIKNRERAMKMLTARLFEKKREEQEKTLAAIQGE 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +I WG QIRSYV PY +VKD RTN+E + V+DG++D F+ A L + Sbjct: 316 QKDIAWGSQIRSYVFHPYSLVKDHRTNMEVGNVQAVMDGEIDSFIDAYLRAQ 367 >gi|123443573|ref|YP_001007546.1| peptide chain release factor 2 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166225120|sp|A1JPL5|RF2_YERE8 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|122090534|emb|CAL13403.1| peptide chain release factor 2 [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 365 Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 184/351 (52%), Positives = 238/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL +N + E P +W A+ L +ER L+ ++ I ++ Sbjct: 14 LSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEEIVTTIDQL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D LLELA+E DD E L + ++ +F + SGE DS + YL++ Sbjct: 74 DQGMDDVTGLLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E DG+ AG+KSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGDVAGLKSATIKIIGDYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ + E + Sbjct: 254 VNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQMLEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363 >gi|1172913|sp|P43918|RF2_HAEIN RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|309751145|gb|ADO81129.1| Peptide chain release factor 2 (RF-2) [Haemophilus influenzae R2866] Length = 365 Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 184/353 (52%), Positives = 249/353 (70%), Gaps = 1/353 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 + LS + + L G D+D V+RL +N + E P +W + +A+ L +ER L+ ++ IK Sbjct: 12 IDLSDRTSVLRGYLDFDAKVERLEEVNGELEQPDVWNDPDKAQALGKERVSLEQVVNTIK 71 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 ++ L D LLELA+E +D E L ++ ++E +F + SGE D+ D Y++ Sbjct: 72 NLEQGLEDVDGLLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVD 131 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G A+GW Sbjct: 132 LQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGW 191 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGG Sbjct: 192 LRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA L+AKLYELELQK+ E Sbjct: 252 QHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAME 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 312 DNKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 363 >gi|16761822|ref|NP_457439.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29143309|ref|NP_806651.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56414987|ref|YP_152062.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197363916|ref|YP_002143553.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|61230204|sp|P0A289|RF2_SALTY RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|61230205|sp|P0A290|RF2_SALTI RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|76363351|sp|Q5PJG1|RF2_SALPA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|238690721|sp|B5BFK6|RF2_SALPK RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|25299688|pir||AG0871 peptide chain release factor 2 (RF-2) [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|154276|gb|AAA72914.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16504124|emb|CAD02871.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp. enterica serovar Typhi] gi|29138943|gb|AAO70511.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56129244|gb|AAV78750.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197095393|emb|CAR60952.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 365 Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 187/351 (53%), Positives = 239/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + N L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERTNVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 TQGLDDVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E +GE AGIKSAT+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDT 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363 >gi|297568438|ref|YP_003689782.1| hypothetical protein DaAHT2_0457 [Desulfurivibrio alkaliphilus AHT2] gi|296924353|gb|ADH85163.1| conserved hypothetical protein [Desulfurivibrio alkaliphilus AHT2] Length = 368 Score = 289 bits (739), Expect = 4e-76, Method: Composition-based stats. Identities = 177/352 (50%), Positives = 241/352 (68%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L L D DN + R+ L ++ P+ W N A + +E+ L + I +++ Sbjct: 16 LQGRLQTLRSHLDLDNKLLRIQELEHRSAAPNFWDNPEAAAGVQKEQSDLQDTIDNWQQV 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 D D +LLELA+ E+D QE S L ++ + + E + +GE D+++A L +H Sbjct: 76 IDSFEDAEVLLELAIAENDHETEQEVSRALNSVEQRLAAMELECMFNGEHDASNAMLTIH 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDW ++LLRMY RWAEK+ F TE L+ G+EAG KS T+L+KG AYG+L+ Sbjct: 136 AGAGGTEAQDWTDILLRMYLRWAEKKGFSTEILDHLPGDEAGTKSVTVLVKGRWAYGYLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVRISP+D+ RRHTSF+S++++P +DD+IE+EI++ D RIDTYRASGAGGQH Sbjct: 196 SEMGIHRLVRISPFDTGGRRHTSFASVFIFPELDDNIEVEINDKDLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T SA+RITH+P+G+VVQCQ ERSQH+NK A ML+A+LYE E R+E Sbjct: 256 VNKTSSAIRITHLPSGIVVQCQNERSQHRNKDTAMKMLKAQLYERERANRKEEQQHLHGD 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K EI WG QIRSYVLQPY++VKD RTN E + +VLDGDLD F+ + L + Sbjct: 316 KKEIAWGSQIRSYVLQPYRLVKDHRTNHETGNVDNVLDGDLDPFIISYLLWQ 367 >gi|295689553|ref|YP_003593246.1| hypothetical protein Cseg_2164 [Caulobacter segnis ATCC 21756] gi|295431456|gb|ADG10628.1| conserved hypothetical protein [Caulobacter segnis ATCC 21756] Length = 373 Score = 289 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 209/352 (59%), Positives = 255/352 (72%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + + L DWD A+++L LN + EDP LW EA+ + RER L + ++ I Sbjct: 12 IEQSVGLLRRRLDWDVALRKLDELNARVEDPTLWDRPSEAQAVSRERAALAAKVEAVQSI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D + ELA E D L + L+ +K + E+LLSGEAD NDAY+E++ Sbjct: 72 ERDLKDAVEYAELADMEGDEESLNDARVQLKALKDRAGRAELEALLSGEADGNDAYIEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTES DWA +LLRMYTRWA +TE +E DG++AGIKSATLL+KGPNAYGWLK Sbjct: 132 SGAGGTESCDWAGILLRMYTRWANAHGMQTELIEETDGDQAGIKSATLLVKGPNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS++RRHTSF+S WVYPVVDD+IEIEI+ +D R DTYRASGAGGQH Sbjct: 192 TEAGVHRLVRISPYDSSARRHTSFASAWVYPVVDDTIEIEINPADVRTDTYRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVR+THIPTG+ V CQ RSQH+N+ +AW MLRA+LYE ELQKRE E Sbjct: 252 INKTDSAVRLTHIPTGIAVACQAGRSQHQNREEAWKMLRARLYEAELQKREAAQQALEDQ 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT+IGWG QIRSYVLQPYQMVKDLRTN+E + VLDGDLD FM A LA + Sbjct: 312 KTDIGWGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDAFMGAALAQR 363 >gi|224552865|gb|ACN55074.1| peptide chain release factor 2, programmed frameshift [Bacillus anthracis str. 'Ames Ancestor'] Length = 365 Score = 289 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 171/353 (48%), Positives = 228/353 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L G D ++++ L K W + A+ ++ E L + + ++ Sbjct: 12 KMAKRLAAFRGSLDLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + I EL EE D + +E ++ + E+ + + LLS D N A LE+ Sbjct: 72 LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNKAILEL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAEKR FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 132 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +D +EIE+ D +IDTYRASGAGGQ Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PT VV CQ ERSQ KN+ A ML+AKLY+ +L++++ + Sbjct: 252 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY +VKD RTN E + V+DG++D F+ A L + Sbjct: 312 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 364 >gi|218555439|ref|YP_002388352.1| peptide chain release factor 2 [Escherichia coli IAI1] gi|226739127|sp|B7LYF5|RF2_ECO8A RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|218362207|emb|CAQ99825.2| peptide chain release factor RF-2 [Escherichia coli IAI1] Length = 365 Score = 289 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 185/351 (52%), Positives = 238/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363 >gi|255320321|ref|ZP_05361506.1| peptide chain release factor 2 [Acinetobacter radioresistens SK82] gi|255302760|gb|EET81992.1| peptide chain release factor 2 [Acinetobacter radioresistens SK82] Length = 351 Score = 289 bits (739), Expect = 5e-76, Method: Composition-based stats. Identities = 180/347 (51%), Positives = 243/347 (70%), Gaps = 1/347 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + GG+FD+D +RL + + EDP +W + A+ + +E+ L+N I+ ++ + +L Sbjct: 4 VRLYGGIFDYDLKKERLEEVLRELEDPSIWNDQSRAQAMAKEKGELENVINVLEGLSTQL 63 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D +L+LA+E DD S+L + L + + +F + S D N Y+E+ AG+G Sbjct: 64 EDAQAMLDLAVEADDESLLADVQAELSSAEEALAKLEFRRMFSNPMDPNPCYVEIQAGSG 123 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWA+MLLRMY RW E+ FK E +E DG+ AGIKSAT+ ++G AYGWL+ E G Sbjct: 124 GTEAQDWASMLLRMYMRWIERHGFKAELMEESDGDVAGIKSATIRVEGEYAYGWLRTESG 183 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR SP+DS +RRHTSFS+++V P VDD+IEI+I+ SD R DTYRASGAGGQH+N T Sbjct: 184 VHRLVRKSPFDSGNRRHTSFSAVFVSPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKT 243 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVR+TH+PTG+VV CQ +RSQH N+ AW LRAKLYELE+ KR E A E SK++I Sbjct: 244 DSAVRLTHMPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMSKRNEAAQALEDSKSDI 303 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 GWG QIRSYVL +KDLRT +E ++ VLDGDLD F++A+L Sbjct: 304 GWGSQIRSYVLDD-SRIKDLRTGVENSNTGAVLDGDLDKFIEASLKQ 349 >gi|53802400|ref|YP_112836.1| peptide chain release factor 2, programmed frameshift [Methylococcus capsulatus str. Bath] gi|53756161|gb|AAU90452.1| peptide chain release factor 2, programmed frameshift [Methylococcus capsulatus str. Bath] Length = 365 Score = 289 bits (738), Expect = 5e-76, Method: Composition-based stats. Identities = 183/350 (52%), Positives = 243/350 (69%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + L G D+D +RL+ + + EDP +W N A+ L +ER L+ ++ + EI Sbjct: 14 LKSRQDALRGYLDFDTKQERLTEVLRELEDPRIWDNPERAQALGKERTQLEGVVNRLNEI 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D LL+LA+EEDD ++ + +L + V +F + SGE D N+A+L++ Sbjct: 74 AAGIDDAAELLQLAVEEDDEDSVESVAADLAHYESVVAEMEFRRMFSGEMDPNNAFLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA ML RMY RW E++ FKTE +E GE AGIKSAT+ +G AYGWL+ Sbjct: 134 AGSGGTEAQDWAQMLERMYLRWGERKGFKTELVEESPGEVAGIKSATIRFEGEYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSFSS++V P +DD+I+I+I+ +D R D YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGNRRHTSFSSVFVSPEIDDNIDIDINPADLRTDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH+PTG+VVQCQ +RSQH N+ LRAKLYELE+QKR E S Sbjct: 254 VNRTESAVRITHLPTGIVVQCQNQRSQHANRDWCMKQLRAKLYELEMQKRNTEKQKLEDS 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K++IGWG QIRSYVL +KDLRTN+E +P VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLD-QSRIKDLRTNVETGNPQAVLDGDLDMFIEASLK 362 >gi|312959346|ref|ZP_07773863.1| peptide chain release factor 2 (RF-2) [Pseudomonas fluorescens WH6] gi|311286063|gb|EFQ64627.1| peptide chain release factor 2 (RF-2) [Pseudomonas fluorescens WH6] Length = 430 Score = 289 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 184/345 (53%), Positives = 242/345 (70%), Gaps = 1/345 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD+D +RL+ +N + EDP +W A+ L RER L + + E+ L Sbjct: 84 KLFGGIFDYDQKHERLTEVNRELEDPSVWNKPEYAQELGRERAALAQIVDTLDELNTGLA 143 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D LL++A+EEDD + + L R++ + +F + S E D N+AYL++ AG+GG Sbjct: 144 DCRDLLDMAVEEDDEGAVGDVVAELARLEENLAKLEFRRMFSHEMDPNNAYLDIQAGSGG 203 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDWAN+LLRMY RWA+KR F +E+ GE AGIK AT+ IKG A+GWL+ E GV Sbjct: 204 TEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGV 263 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ +D RIDTYR+SGAGGQHVNTTD Sbjct: 264 HRLVRKSPFDSGNRRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTD 323 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PT VV CQ ERSQH NK A MLRAKLYE E+QKR + E +K++IG Sbjct: 324 SAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRAKLYEQEMQKRNAASQALEDTKSDIG 383 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL +KDLRTNIE++ VLDGD+D++++A+L Sbjct: 384 WGHQIRSYVLD-ASRIKDLRTNIERSDCDKVLDGDIDEYLEASLK 427 >gi|257453984|ref|ZP_05619260.1| peptide chain release factor 2 [Enhydrobacter aerosaccus SK60] gi|257448649|gb|EEV23616.1| peptide chain release factor 2 [Enhydrobacter aerosaccus SK60] Length = 349 Score = 289 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 178/346 (51%), Positives = 241/346 (69%), Gaps = 1/346 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD + +RL +N + E+P LW + A + +E+ LDN I I + D+L Sbjct: 3 TSFGGIFDIEAKQERLEEVNLELENPELWNDPERATKISKEKSQLDNVIGVITALDDKLE 62 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D +++LA+E DD ++L + L + +V +F+ + SGE D N+ Y+++ +G+GG Sbjct: 63 DAKAMIDLAVEADDATLLADVQAELDEAEAKVADLEFKRMFSGEMDGNNCYVDIQSGSGG 122 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDWA MLLRMY RW E FK E +E+ G AGIKSA++ +KG A+GWL+ E GV Sbjct: 123 TEAQDWAEMLLRMYLRWCESHGFKAEIMELSAGGVAGIKSASIHVKGDYAFGWLRTEIGV 182 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DSN+ RHTSF++++V P +DD+IEI+I+ +D RIDTYR+SGAGGQHVNTTD Sbjct: 183 HRLVRKSPFDSNNGRHTSFAAVFVSPEIDDNIEIDINPADLRIDTYRSSGAGGQHVNTTD 242 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH PTG+VV CQ ERSQH NK A MLRAKLYE E+ +R E E +K++IG Sbjct: 243 SAVRITHQPTGIVVACQNERSQHANKDTAMKMLRAKLYEREMMQRMEKQQALEETKSDIG 302 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYVL +KDLRT +E ++ VLDGDLD F++A+L Sbjct: 303 WGSQIRSYVLDD-SRIKDLRTGVETSNTQAVLDGDLDKFIEASLKA 347 >gi|42784339|ref|NP_981586.1| peptide chain release factor 2 [Bacillus cereus ATCC 10987] gi|42740270|gb|AAS44194.1| peptide chain release factor 2, programmed frameshift [Bacillus cereus ATCC 10987] Length = 380 Score = 289 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 171/353 (48%), Positives = 229/353 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L G D ++++ L K W + A+ ++ E L + + ++ Sbjct: 27 KMAKRLAAFRGSLDLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 86 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + I EL EE D + +E ++ + E+ + + LLS D N+A LE+ Sbjct: 87 LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAEKR FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +D +EIE+ D +IDTYRASGAGGQ Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 266 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PT VV CQ ERSQ KN+ A ML+AKLY+ +L++++ + Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY +VKD RTN E + V+DG++D F+ A L + Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379 >gi|304317582|ref|YP_003852727.1| hypothetical protein Tthe_2166 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779084|gb|ADL69643.1| hypothetical protein Tthe_2166 [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 365 Score = 289 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 160/354 (45%), Positives = 237/354 (66%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 + L + +G D + + ++ ++ K +P W ++ +++ L ++ + L IS + Sbjct: 10 LNLIDTIKEMGASLDIEGLKREVAEIDKKMAEPDFWNDLQKSQELSKKLKDLKELISEYE 69 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 I+ D L+EL +EE D S+ QE + + + ++ + ++LLSG D N+A L Sbjct: 70 SIEKLCEDLNALIELGIEEGDESLSQEVHEEYKSLSKKINDMKIKTLLSGPYDRNNAILS 129 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +HAGAGGTE+QDW MLLRMY RWA + ++ E ++ G++AG+KS T+++KG AYG+ Sbjct: 130 IHAGAGGTEAQDWTEMLLRMYMRWASSKNYEVETVDYLPGDDAGVKSVTIMVKGAFAYGY 189 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LKGE GVHRLVRISP+D+ RRHTSF+ + V P +DD I+++I D +IDTYR+SGAGG Sbjct: 190 LKGEAGVHRLVRISPFDAAGRRHTSFALVEVLPEIDDDIKVDIRPEDLKIDTYRSSGAGG 249 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVN T+SA+RITHIPTG++VQCQ ERSQ +N+ A ML+AKL +L +++++E + Sbjct: 250 QHVNKTESAIRITHIPTGIIVQCQSERSQMQNRETAMKMLKAKLMDLMIKEQKEKIEDLK 309 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 E GWG QIRSYV QPY +VKD RTN E + + V+DGD+D+F+ A L K Sbjct: 310 GEHKEAGWGNQIRSYVFQPYTLVKDHRTNFEVGNVNAVMDGDIDEFINAYLKQK 363 >gi|295697362|ref|YP_003590600.1| hypothetical protein Btus_2812 [Bacillus tusciae DSM 2912] gi|295412964|gb|ADG07456.1| hypothetical protein Btus_2812 [Bacillus tusciae DSM 2912] Length = 382 Score = 289 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 170/352 (48%), Positives = 235/352 (66%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L+ +G D ++++ + + W + A+ ++ E L + + ++ + Sbjct: 15 LVERLDEIGRSLDLAGKKKQIAGMEQRMAAADFWDDQEGAQKVIAEVNRLKDVVERVEGL 74 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L EL EE D ++L E + ++ ++ + E +LSG D N+A +E+H Sbjct: 75 RSRVEDLEVLWELGHEEGDETVLGEIEAGITQVHSQLGQFELELMLSGPYDRNNAIVELH 134 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDW MLLRMYTRWAE R +K E L+ GEEAG+KS TLLIKG NAYG+LK Sbjct: 135 PGAGGTESQDWTAMLLRMYTRWAESRGYKVETLDYLPGEEAGVKSVTLLIKGHNAYGYLK 194 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+D++ RRHTSF+S+ V P +D+S++++I D +IDTYR+SGAGGQH Sbjct: 195 AERGVHRLVRISPFDASGRRHTSFASVDVLPELDESVDVDIRPEDLKIDTYRSSGAGGQH 254 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV CQ ERSQ KN+A A +L A+LYE +++EE Sbjct: 255 VNTTDSAVRITHIPTGIVVTCQSERSQIKNRATAMKILAARLYERRRREQEEQIAALRGE 314 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EI WG QIRSYV PY MVKD RT +E + V+DGD+D F+ A L + Sbjct: 315 QKEIAWGSQIRSYVFHPYSMVKDHRTGVETGNVQAVMDGDIDAFIDAWLRQR 366 >gi|124267958|ref|YP_001021962.1| peptide chain release factor 2 [Methylibium petroleiphilum PM1] gi|124260733|gb|ABM95727.1| bacterial peptide chain release factor 2 (bRF-2) [Methylibium petroleiphilum PM1] Length = 355 Score = 289 bits (738), Expect = 6e-76, Method: Composition-based stats. Identities = 170/343 (49%), Positives = 238/343 (69%), Gaps = 1/343 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RLS +N EDP +W + A+ L RE++ L+ + I ++ L DN Sbjct: 12 GGIFDYDEKSRRLSEVNAALEDPTVWNDPKNAQALGREKKSLETVVDTIASLERNLADNA 71 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L E++ EE D L+ + +VE +F + S AD ++ ++++ AGAGGTE+ Sbjct: 72 ELYEMSKEEGDEDGLRAIEAETLGLAAQVEQLEFRRMFSNPADPSNCFIDIQAGAGGTEA 131 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA+MLLR Y ++ E++ FK + +G+ AGIKSAT+ ++G A+G L+ E GVHRL Sbjct: 132 CDWASMLLRQYLKYCERKGFKATIEDETEGDTAGIKSATIKVEGDYAFGHLRTETGVHRL 191 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS+ RHTSF+S++VYP VDDSIEIEI+ +D R DT+RASGAGGQH+N TDSAV Sbjct: 192 VRKSPFDSSGGRHTSFASLFVYPEVDDSIEIEINPADVRTDTFRASGAGGQHINKTDSAV 251 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+THIPTG+VVQCQ RSQH N+ AW LR++LY+ E++KR+E E +KT++GWG Sbjct: 252 RLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDHEMRKRQEEQQKLEDTKTDVGWGH 311 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 312 QIRSYVLD-NSRIKDLRTNVEISNTQKVLDGDLDAFIEASLKQ 353 >gi|296533603|ref|ZP_06896168.1| peptide chain release factor RF2 [Roseomonas cervicalis ATCC 49957] gi|296266065|gb|EFH12125.1| peptide chain release factor RF2 [Roseomonas cervicalis ATCC 49957] Length = 376 Score = 289 bits (738), Expect = 7e-76, Method: Composition-based stats. Identities = 199/353 (56%), Positives = 259/353 (73%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L DWD A++RL +N + EDP LW+ EA+ +MRER L + + +K+ Sbjct: 11 QIEDSIALLRRHLDWDVALRRLDEVNARAEDPTLWEKPDEAQAVMRERNRLADQVEGVKK 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ + D L L+ELA E D + +L E + ++ ESLLSGEAD D ++EV Sbjct: 71 LEQDVKDALELIELAEAEGDGATADAAIADLHSFAAEAKRREIESLLSGEADMRDCFVEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTE+QDWA MLLRMY RWAEKR +K + E +GE+AGIKSAT+ + GPNAYGWL Sbjct: 131 NAGAGGTEAQDWAQMLLRMYQRWAEKRGYKVQLTEESEGEQAGIKSATIQVTGPNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+ +RR TSF+S++V+PV+DD IEIEI+ +D + DT+RASGAGGQ Sbjct: 191 KTESGVHRLVRISPFDAAARRQTSFASVYVFPVIDDKIEIEINPADLKTDTFRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+S VR THIPTG+V Q+RSQH+N+ A ML+A+LYELEL+KREEI E+ Sbjct: 251 HVNKTESGVRFTHIPTGIVAASTQDRSQHRNRVIAMEMLKARLYELELRKREEITAGIEA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT+IGWG QIRSYVL PYQ+VKDLRTN+EK +P VLDG+LDDFM A LA + Sbjct: 311 GKTDIGWGHQIRSYVLAPYQLVKDLRTNVEKGNPDAVLDGELDDFMAAALASR 363 >gi|119384552|ref|YP_915608.1| peptide chain release factor 2 [Paracoccus denitrificans PD1222] gi|119374319|gb|ABL69912.1| bacterial peptide chain release factor 2 (bRF-2) [Paracoccus denitrificans PD1222] Length = 402 Score = 289 bits (738), Expect = 7e-76, Method: Composition-based stats. Identities = 199/352 (56%), Positives = 244/352 (69%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L LG DW+ A RL LN E +W + A+ LMR+RQ L +A+ + I Sbjct: 39 IRKSLKLLGQRMDWETAPHRLEELNAMIEAGDIWSDQARAQKLMRDRQMLSDAVETYRRI 98 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L DN L+EL E D I+ + L+ + K+ E+LL+GEAD ND +LE++ Sbjct: 99 ESELKDNAELIELGEAEGDDEIVADAEAALKSLAELAAQKELEALLNGEADGNDTFLEIN 158 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMY RWAEK+ + E L GEEAGI+SA I GPNAYGWLK Sbjct: 159 AGAGGTESADWASMLARMYVRWAEKKGYSVELLSETPGEEAGIRSAAYKISGPNAYGWLK 218 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEI I +++ RIDTYR+SGAGGQH Sbjct: 219 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEITIPDNEIRIDTYRSSGAGGQH 278 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV E+SQH+N+A A L+A+LY+LEL KR N + Sbjct: 279 VNTTDSAVRITHLPTGIVVTSS-EKSQHQNRANAMAALKARLYQLELDKRNAAINAQHEA 337 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K + GWG QIRSYVL PYQMVKDLRT E + VLDG LD FM ATLA+ Sbjct: 338 KGDAGWGNQIRSYVLHPYQMVKDLRTGHETSDTQGVLDGALDAFMAATLALD 389 >gi|71065379|ref|YP_264106.1| peptide chain release factor 2 [Psychrobacter arcticus 273-4] gi|71038364|gb|AAZ18672.1| bacterial peptide chain release factor 2 (bRF-2) [Psychrobacter arcticus 273-4] Length = 349 Score = 289 bits (738), Expect = 7e-76, Method: Composition-based stats. Identities = 185/343 (53%), Positives = 242/343 (70%), Gaps = 1/343 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RL +N + E+P LW + A + +E+ LD I + ++ L D Sbjct: 6 GGIFDFDGKQERLEEVNLELENPELWNDPERATKINKEKSQLDGVIDVVVSLETTLEDAS 65 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +LELA+EE+D S+L + L + V +F + SGE D N+ YL++ +G+GGTE+ Sbjct: 66 AMLELAVEEEDESLLADVQAELDNAEKRVADLEFRRMFSGEMDPNNCYLDIQSGSGGTEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRWAE FK + +E+ G AGIKSAT+ IKG A+GWL+ E GVHRL Sbjct: 126 QDWAEMLLRMYTRWAEAHGFKVDVIEVSAGGVAGIKSATIEIKGDYAFGWLRTEIGVHRL 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DSN+ RHTSF++++V P +DD+IEI+++ +D RIDTYR+SGAGGQHVNTTDSAV Sbjct: 186 VRKSPFDSNNGRHTSFAAVFVSPEIDDNIEIDVNPADLRIDTYRSSGAGGQHVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH P+GVVV CQ ERSQH NKA A MLRAKLYELE+QKR E E K+++GWG Sbjct: 246 RITHEPSGVVVTCQNERSQHGNKATAMKMLRAKLYELEMQKRMESQQAVEDGKSDVGWGS 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 306 QIRSYVLDD-SRIKDLRTGVETFNTGAVLDGDLDQFIEASLKA 347 >gi|147569|gb|AAA24520.1| peptide chain release factor 2 [Escherichia coli] Length = 365 Score = 288 bits (737), Expect = 8e-76, Method: Composition-based stats. Identities = 183/351 (52%), Positives = 237/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHR+VR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YR SGAGGQH Sbjct: 194 TETGVHRVVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRTSGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363 >gi|89072535|ref|ZP_01159107.1| putative peptide chain release factor 2 [Photobacterium sp. SKA34] gi|89051639|gb|EAR57092.1| putative peptide chain release factor 2 [Photobacterium sp. SKA34] Length = 353 Score = 288 bits (737), Expect = 8e-76, Method: Composition-based stats. Identities = 178/343 (51%), Positives = 238/343 (69%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG FD+D +RL +N + E P +W A+ L +ER L+ + I + + D Sbjct: 9 LGGTFDYDAKKERLEEVNAELEQPDVWNEPDRAQALGKERSSLEAVVETIDLLDQGVEDV 68 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+EE+D E L ++ ++ +F + +G+ D++D YL++ AG+GGTE Sbjct: 69 EGLLELAVEENDQETFDEIEPELAELEAKLAKLEFRRMFAGDHDASDCYLDLQAGSGGTE 128 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDW +M+LRMY RWA+ + FKTE +EI DG+ AG+KS T+ I G AYGWL+ E GVHR Sbjct: 129 AQDWTSMMLRMYLRWADAKGFKTEIIEISDGDVAGLKSVTVRISGEYAYGWLRTETGVHR 188 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS RRHTSF+S +VYP +DD+I I+I+ SD RID YRASGAGGQHVNTT+SA Sbjct: 189 LVRKSPFDSGGRRHTSFASAFVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTTESA 248 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT +VVQCQ +RSQHKNK QA L+AKL+E E+QK+ E +K++IGWG Sbjct: 249 VRITHLPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEYEMQKQNAEKQASEDTKSDIGWG 308 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 309 SQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLK 350 >gi|206578228|ref|YP_002236652.1| peptide chain release factor 2 [Klebsiella pneumoniae 342] gi|288933629|ref|YP_003437688.1| hypothetical protein Kvar_0746 [Klebsiella variicola At-22] gi|238054482|sp|B5XUF3|RF2_KLEP3 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|206567286|gb|ACI09062.1| peptide chain release factor 2 [Klebsiella pneumoniae 342] gi|288888358|gb|ADC56676.1| hypothetical protein Kvar_0746 [Klebsiella variicola At-22] Length = 365 Score = 288 bits (737), Expect = 8e-76, Method: Composition-based stats. Identities = 184/351 (52%), Positives = 238/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+E +D E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 SQGLEDVAGLLELAVEAEDEETFNEAVAELDGLEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML+RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKIIGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363 >gi|16130793|ref|NP_417367.1| peptide chain release factor RF-2 [Escherichia coli str. K-12 substr. MG1655] gi|89109670|ref|AP_003450.1| peptide chain release factor RF-2 [Escherichia coli str. K-12 substr. W3110] gi|170082452|ref|YP_001731772.1| peptide chain release factor RF-2 [Escherichia coli str. K-12 substr. DH10B] gi|238902016|ref|YP_002927812.1| peptide chain release factor RF-2 [Escherichia coli BW2952] gi|2507293|sp|P07012|RF2_ECOLI RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|229576667|sp|B1XEH8|RF2_ECODH RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|259585244|sp|C5A0G3|RF2_ECOBW RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|28373696|pdb|1ML5|Z Chain Z, Structure Of The E. Coli Ribosomal Termination Complex With Release Factor 2 gi|2367172|gb|AAC75929.1| peptide chain release factor RF-2 [Escherichia coli str. K-12 substr. MG1655] gi|85675703|dbj|BAE76956.1| peptide chain release factor RF-2 [Escherichia coli str. K12 substr. W3110] gi|169890287|gb|ACB03994.1| peptide chain release factor RF-2 [Escherichia coli str. K-12 substr. DH10B] gi|238861985|gb|ACR63983.1| peptide chain release factor RF-2 [Escherichia coli BW2952] gi|260448063|gb|ACX38485.1| hypothetical protein EcDH1_0801 [Escherichia coli DH1] gi|315137490|dbj|BAJ44649.1| peptide chain release factor RF-2 [Escherichia coli DH1] gi|228558|prf||1806195A peptide chain-releasing factor:ISOTYPE=2 Length = 365 Score = 288 bits (737), Expect = 8e-76, Method: Composition-based stats. Identities = 184/351 (52%), Positives = 237/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YR SGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRTSGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363 >gi|15833017|ref|NP_311790.1| peptide chain release factor 2 [Escherichia coli O157:H7 str. Sakai] gi|26249306|ref|NP_755346.1| peptide chain release factor 2 [Escherichia coli CFT073] gi|30064203|ref|NP_838374.1| peptide chain release factor 2 [Shigella flexneri 2a str. 2457T] gi|170018863|ref|YP_001723817.1| peptide chain release factor 2 [Escherichia coli ATCC 8739] gi|170682178|ref|YP_001745044.1| peptide chain release factor 2 [Escherichia coli SMS-3-5] gi|215488191|ref|YP_002330622.1| peptide chain release factor 2 [Escherichia coli O127:H6 str. E2348/69] gi|218550138|ref|YP_002383929.1| peptide chain release factor 2 [Escherichia fergusonii ATCC 35469] gi|218559884|ref|YP_002392797.1| peptide chain release factor 2 [Escherichia coli S88] gi|218691016|ref|YP_002399228.1| peptide chain release factor 2 [Escherichia coli ED1a] gi|218696486|ref|YP_002404153.1| peptide chain release factor 2 [Escherichia coli 55989] gi|218701600|ref|YP_002409229.1| peptide chain release factor 2 [Escherichia coli IAI39] gi|218706397|ref|YP_002413916.1| peptide chain release factor 2 [Escherichia coli UMN026] gi|253772268|ref|YP_003035099.1| peptide chain release factor 2 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162803|ref|YP_003045911.1| peptide chain release factor 2 [Escherichia coli B str. REL606] gi|260845559|ref|YP_003223337.1| peptide chain release factor RF-2 [Escherichia coli O103:H2 str. 12009] gi|260857014|ref|YP_003230905.1| peptide chain release factor RF-2 [Escherichia coli O26:H11 str. 11368] gi|260869568|ref|YP_003235970.1| peptide chain release factor RF-2 [Escherichia coli O111:H- str. 11128] gi|54039052|sp|P66024|RF2_ECO57 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|54039053|sp|P66025|RF2_SHIFL RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|54041596|sp|P66023|RF2_ECOL6 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|189040000|sp|B1ITB1|RF2_ECOLC RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|226739125|sp|B7MM78|RF2_ECO45 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|226739126|sp|B7NW32|RF2_ECO7I RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|226739128|sp|B7N7D5|RF2_ECOLU RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|226739129|sp|B1LR73|RF2_ECOSM RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|226739130|sp|B7LPA4|RF2_ESCF3 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|254790914|sp|B7UHU0|RF2_ECO27 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|254790915|sp|B7LF76|RF2_ECO55 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|254790916|sp|B7MZI9|RF2_ECO81 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|26109714|gb|AAN81919.1|AE016766_7 Peptide chain release factor 2 [Escherichia coli CFT073] gi|13363235|dbj|BAB37186.1| peptide chain release factor RF-2 [Escherichia coli O157:H7 str. Sakai] gi|30042460|gb|AAP18184.1| peptide chain release factor RF-2 [Shigella flexneri 2a str. 2457T] gi|169753791|gb|ACA76490.1| hypothetical protein EcolC_0818 [Escherichia coli ATCC 8739] gi|170519896|gb|ACB18074.1| peptide chain release factor 2 [Escherichia coli SMS-3-5] gi|215266263|emb|CAS10692.1| peptide chain release factor RF-2 [Escherichia coli O127:H6 str. E2348/69] gi|218353218|emb|CAU99134.1| peptide chain release factor RF-2 [Escherichia coli 55989] gi|218357679|emb|CAQ90320.2| peptide chain release factor RF-2 [Escherichia fergusonii ATCC 35469] gi|218366653|emb|CAR04407.2| peptide chain release factor RF-2 [Escherichia coli S88] gi|218371586|emb|CAR19425.2| peptide chain release factor RF-2 [Escherichia coli IAI39] gi|218428580|emb|CAR09507.2| peptide chain release factor RF-2 [Escherichia coli ED1a] gi|218433494|emb|CAR14397.2| peptide chain release factor RF-2 [Escherichia coli UMN026] gi|253323312|gb|ACT27914.1| hypothetical protein ECBD_0846 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974704|gb|ACT40375.1| peptide chain release factor 2 [Escherichia coli B str. REL606] gi|253978870|gb|ACT44540.1| peptide chain release factor 2 [Escherichia coli BL21(DE3)] gi|257755663|dbj|BAI27165.1| peptide chain release factor RF-2 [Escherichia coli O26:H11 str. 11368] gi|257760706|dbj|BAI32203.1| peptide chain release factor RF-2 [Escherichia coli O103:H2 str. 12009] gi|257765924|dbj|BAI37419.1| peptide chain release factor RF-2 [Escherichia coli O111:H- str. 11128] gi|309703251|emb|CBJ02586.1| peptide chain release factor 2 (RF-2) [Escherichia coli ETEC H10407] gi|313848742|emb|CAQ33203.2| peptide chain release factor RF2 [Escherichia coli BL21(DE3)] gi|323377221|gb|ADX49489.1| Peptide chain release factor 2 [Escherichia coli KO11] Length = 365 Score = 288 bits (737), Expect = 8e-76, Method: Composition-based stats. Identities = 185/351 (52%), Positives = 238/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363 >gi|308535208|ref|YP_002137819.2| peptide chain release factor 2 [Geobacter bemidjiensis Bem] gi|308052553|gb|ACH38023.2| peptide chain release factor 2 [Geobacter bemidjiensis Bem] Length = 371 Score = 288 bits (737), Expect = 9e-76, Method: Composition-based stats. Identities = 175/352 (49%), Positives = 243/352 (69%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ +++ L G + D+ +R+ L T P W + A+ ++R R ++ ++ + Sbjct: 11 ELTERIDKLRGSLEVDDKKERMQELEELTSRPDFWNDAENAQKVLRSRTAMEKDVTTWES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D L+EL EE D + L E + +++ V +F +LSG D++ A++ + Sbjct: 71 LDKQARDIKELIELGSEEQDEATLAEVAAMNAQLETGVSQAEFRRMLSGPHDASGAFVSI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTESQDWA MLLRMY R+ EK+ +KTE + +G+ AG+K T + G AYG+L Sbjct: 131 NSGAGGTESQDWAEMLLRMYLRYCEKKGWKTEITDYQEGDGAGVKGVTFAVTGEFAYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGG 240 K E G+HRLVRISP+DS++RRHTSF+S +V+P + ++ IEI+I+ESD RIDTYR+SGAGG Sbjct: 191 KAEAGIHRLVRISPFDSSARRHTSFASAFVFPVIEEEDIEIKIAESDLRIDTYRSSGAGG 250 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVNTTDSA+RITHIPTG VV CQ ERSQH NKA A +LR+KLYE+EL++RE A+ Sbjct: 251 QHVNTTDSAIRITHIPTGTVVACQSERSQHMNKATAMKVLRSKLYEMELREREAKASDIA 310 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K EIGWG QIRSYVL PY+MVKDLRT +E +P VLDG LDDF+ L Sbjct: 311 GEKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGSLDDFVVPYLM 362 >gi|251799706|ref|YP_003014437.1| hypothetical protein Pjdr2_5745 [Paenibacillus sp. JDR-2] gi|247547332|gb|ACT04351.1| hypothetical protein Pjdr2_5745 [Paenibacillus sp. JDR-2] Length = 368 Score = 288 bits (737), Expect = 9e-76, Method: Composition-based stats. Identities = 169/353 (47%), Positives = 234/353 (66%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +++++L L G D D ++ ++ K P W + +A+ ++ E + + + + Sbjct: 12 EVAKRLQELRGSLDLDLKLEHIANFEEKMTAPDFWDDNTKAQGIISELNAIKSVVEHYER 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D L+ELA EE D S+ E + + +V + + LL+ D +A LE+ Sbjct: 72 LNADCEDLQTLIELADEESDDSLEAEVIGGIASLNEKVNGFELQLLLNQPYDKLNAILEL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA ML RMYTRWAEKR FK E L+ DG+EAGIKS T+ +KG NAYG+L Sbjct: 132 HPGAGGTESQDWAQMLYRMYTRWAEKRGFKVEVLDYLDGDEAGIKSVTIAVKGYNAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P + + IE+EI D ++DTYRASGAGGQ Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFVSCDVVPEITEDIEVEIRTEDLKVDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SA+RITHIPTG+VV CQQERSQ +N+ +A NMLR+KLYE +++++++ Sbjct: 252 HVNKTESAIRITHIPTGIVVACQQERSQIQNRERAMNMLRSKLYERKIEEQQKHLAEIRG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +++I WG QIRSYV PY MVKD RT++E + V+DGDLD F+ L + Sbjct: 312 EQSDIAWGSQIRSYVFHPYSMVKDHRTSVETGNVGAVMDGDLDAFIDGYLRSQ 364 >gi|317049377|ref|YP_004117025.1| hypothetical protein Pat9b_3172 [Pantoea sp. At-9b] gi|316950994|gb|ADU70469.1| hypothetical protein Pat9b_3172 [Pantoea sp. At-9b] Length = 365 Score = 288 bits (737), Expect = 9e-76, Method: Composition-based stats. Identities = 182/351 (51%), Positives = 240/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEIIVGTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+E DD ET L ++ ++ +F + SGE DS D Y+++ Sbjct: 74 YQGLEDVQGLLELAVEADDEETFNETIAELDGLETKLGELEFRRMFSGEYDSADCYIDLQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E +GE AG+KSAT+ + G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGLKSATIRVSGEYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS ++YP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAAEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDRFIEASLKA 363 >gi|311278189|ref|YP_003940420.1| Peptide chain release factor 2 [Enterobacter cloacae SCF1] gi|308747384|gb|ADO47136.1| Peptide chain release factor 2 [Enterobacter cloacae SCF1] Length = 365 Score = 288 bits (737), Expect = 9e-76, Method: Composition-based stats. Identities = 185/351 (52%), Positives = 239/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLNQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 AQGLEDVSGLLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E +GE AG+KSAT+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGLKSATIKISGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIP+G+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPSGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDT 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363 >gi|227513676|ref|ZP_03943725.1| peptide chain release factor 2 [Lactobacillus buchneri ATCC 11577] gi|227524821|ref|ZP_03954870.1| peptide chain release factor 2 [Lactobacillus hilgardii ATCC 8290] gi|227083087|gb|EEI18399.1| peptide chain release factor 2 [Lactobacillus buchneri ATCC 11577] gi|227088036|gb|EEI23348.1| peptide chain release factor 2 [Lactobacillus hilgardii ATCC 8290] Length = 354 Score = 288 bits (737), Expect = 9e-76, Method: Composition-based stats. Identities = 172/345 (49%), Positives = 225/345 (65%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGGLFD+D + +S K +P W + A+ ++ E L + L D Sbjct: 3 LGGLFDFDALSESISINEAKMAEPGFWDDQQAAQKMIDETNQLKTKRDRFNTLTKELDDL 62 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 + LEL E+ D + E ++K +++ Q LL+G+ D N+A LE+H GAGGTE Sbjct: 63 KVTLELISEDPDSGMQDEFIGEADKLKKQLDRYQLGLLLNGKYDHNNAILEIHPGAGGTE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDW +MLLRMYTRWAE FK + L+ GE AGI S ++LI G NAYG+L+ E+GVHR Sbjct: 123 AQDWGSMLLRMYTRWAESHNFKVDVLDYQVGEVAGINSVSILISGENAYGYLRSEKGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+DS RRHTSF+S+ V P +DD + I+IS + ++D YRASGAGGQHVN T SA Sbjct: 183 LVRISPFDSAGRRHTSFASVDVMPELDDDVSIKISPDELKVDVYRASGAGGQHVNKTSSA 242 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG+VV Q +RSQ +N+ A NML++KLYELE QK+ E E + +IGWG Sbjct: 243 VRITHIPTGIVVASQAQRSQLQNRQTALNMLKSKLYELEEQKKAEEKAKIEGEQLDIGWG 302 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QIRSYV PY MVKD RTN E + + V+DGDLD F+ A L + Sbjct: 303 SQIRSYVFHPYSMVKDHRTNYETANVNGVMDGDLDPFINAYLQWQ 347 >gi|226328243|ref|ZP_03803761.1| hypothetical protein PROPEN_02136 [Proteus penneri ATCC 35198] gi|225202976|gb|EEG85330.1| hypothetical protein PROPEN_02136 [Proteus penneri ATCC 35198] Length = 347 Score = 288 bits (737), Expect = 9e-76, Method: Composition-based stats. Identities = 186/343 (54%), Positives = 240/343 (69%), Gaps = 1/343 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RL +N + E P +W A+ L +ER L+ + I ++ L D Sbjct: 4 GGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVETIDQLDQGLEDVS 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LLELA+E DD E L + ++E +F + SGE DS D YL++ AG+GGTE+ Sbjct: 64 GLLELAVEADDEETFNEAIAELDVLNKKLEQLEFRRMFSGEYDSADCYLDLQAGSGGTEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA+ML+RMY RWAE R FKTE +E DG+ AG+KSAT+ I G AYGWL+ E GVHRL Sbjct: 124 QDWASMLMRMYLRWAESRGFKTEIIEESDGDVAGLKSATIKIIGEYAYGWLRTETGVHRL 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS RRHTSFSS ++YP VDD+I+IEI+ +D RID YRASGAGGQHVN T+SAV Sbjct: 184 VRKSPFDSGGRRHTSFSSAFIYPEVDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH+PTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ + E +K++IGWG Sbjct: 244 RITHVPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNADKQVMEDNKSDIGWGS 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 304 QIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 345 >gi|242240700|ref|YP_002988881.1| hypothetical protein Dd703_3297 [Dickeya dadantii Ech703] gi|242132757|gb|ACS87059.1| hypothetical protein Dd703_3297 [Dickeya dadantii Ech703] Length = 365 Score = 288 bits (737), Expect = 9e-76, Method: Composition-based stats. Identities = 188/351 (53%), Positives = 241/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL +N + E P +W A+ L +ER L+ + I+++ Sbjct: 14 LSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPDRAQALGKERSSLEMIVDTIEQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LL+LA+EEDD ET L +++ ++ +F + SGE DS D Y+++ Sbjct: 74 NQGLEDVTGLLDLAVEEDDEETFNETIIELDQLENKLGQLEFRRMFSGEYDSADCYIDLQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E +GE AGIKSAT+ + G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAESKGFKTEVIEESEGEVAGIKSATIKVVGEYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE ELQK+ E + Sbjct: 254 VNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMRQLKAKLYEFELQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQSVLDGDLDKFIEASLKA 363 >gi|90580579|ref|ZP_01236384.1| putative peptide chain release factor 2 [Vibrio angustum S14] gi|90438237|gb|EAS63423.1| putative peptide chain release factor 2 [Photobacterium angustum S14] Length = 353 Score = 288 bits (736), Expect = 9e-76, Method: Composition-based stats. Identities = 178/343 (51%), Positives = 238/343 (69%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG FD+D +RL +N + E P +W A+ L +ER L+ + I + + D Sbjct: 9 LGGTFDYDAKKERLEEVNAELEQPDVWNEPDRAQALGKERASLEAVVETIDLLDQGVEDV 68 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+EE+D E L ++ ++ +F + +G+ D++D YL++ AG+GGTE Sbjct: 69 EGLLELAVEENDQETFDEIEPELAELEAKLAKLEFRRMFAGDHDASDCYLDLQAGSGGTE 128 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDW +M+LRMY RWA+ + FKTE +EI DG+ AG+KS T+ I G AYGWL+ E GVHR Sbjct: 129 AQDWTSMMLRMYLRWADAKGFKTEIIEISDGDVAGLKSVTVRISGEYAYGWLRTETGVHR 188 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS RRHTSF+S +VYP +DD+I I+I+ SD RID YRASGAGGQHVNTT+SA Sbjct: 189 LVRKSPFDSGGRRHTSFASAFVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTTESA 248 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT +VVQCQ +RSQHKNK QA L+AKL+E E+QK+ E +K++IGWG Sbjct: 249 VRITHLPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEYEMQKQNAEKQASEDTKSDIGWG 308 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 309 SQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLK 350 >gi|289208167|ref|YP_003460233.1| hypothetical protein TK90_0982 [Thioalkalivibrio sp. K90mix] gi|288943798|gb|ADC71497.1| conserved hypothetical protein [Thioalkalivibrio sp. K90mix] Length = 364 Score = 288 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 180/350 (51%), Positives = 243/350 (69%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L LGG+FD+ +RL + + E+P +W + A+ L +ER L+N + I+EI Sbjct: 13 LKAAWKALGGIFDYPVKEERLEEVQRELENPDIWNDPDRAQALGKERAQLENIVVNIREI 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 +L D+ LLE+A +DD +++ + VE +F + SG+ D +AYL++ Sbjct: 73 GTQLDDSRDLLEMAEADDDAETASAVEADVEALTARVEALEFRRMFSGDMDEANAYLDIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWAN+LLRMY RWAE FKTE +E+ +GE AGIKSAT+ I+G A+GWL+ Sbjct: 133 AGSGGTEAQDWANILLRMYLRWAEAHGFKTEIIELSEGEVAGIKSATVRIEGEYAFGWLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSF+S++ P VDDS EIEI+ +D R+DTYRASGAGGQH Sbjct: 193 TETGVHRLVRKSPFDSGNRRHTSFASVFASPEVDDSFEIEINPADLRVDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SA+RITH P+G+VV CQ +RSQHKN+ A L+AKLYE+E+QKR E + Sbjct: 253 VNRTESAIRITHEPSGIVVACQNDRSQHKNRDTAMKQLKAKLYEMEIQKRNAEKQAAEDA 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 313 KSDIGWGSQIRSYVLD-QSRIKDLRTGVEVGNTQAVLDGDLDQFIEASLK 361 >gi|319427481|gb|ADV55555.1| peptide chain release factor 2, PrfB [Shewanella putrefaciens 200] Length = 365 Score = 288 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 171/351 (48%), Positives = 233/351 (66%), Gaps = 1/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ + L G D+D +RL + + E +W A+ L +ER L+ + I + Sbjct: 13 ELAERTQLLRGYLDYDAKHERLEEVTRELESSDVWNEPERAQALGKERASLEAVVKTIDD 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L D LLELA+EE+D ET+ L ++ + +F + SG D+++ YL++ Sbjct: 73 MDSGLEDVEGLLELAVEEEDEDTFNETTKELDYLESRLADLEFRRMFSGPQDASNCYLDI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +G+GGTE+QDWANM+LRMY RW E F E +E+ DG+ AGIK AT+ G A+GWL Sbjct: 133 QSGSGGTEAQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS+ RRHTSF S++VYP +DD I I+I+ +D RID YRASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPADLRIDVYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITH+PT VVQCQ +RSQHKNK A L+AKL+ELE+ K+ E Sbjct: 253 HVNRTESAVRITHLPTNTVVQCQNDRSQHKNKDSAMKQLKAKLFELEMHKQNAEKQAAED 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +K++IGWG QIRSYVL +KDLRT++E + VLDGDLD F++A+L Sbjct: 313 AKSDIGWGSQIRSYVLDD-SRIKDLRTSVETRNTQAVLDGDLDKFIEASLK 362 >gi|308187994|ref|YP_003932125.1| Peptide chain release factor 2 (RF-2) [Pantoea vagans C9-1] gi|308058504|gb|ADO10676.1| Peptide chain release factor 2 (RF-2) [Pantoea vagans C9-1] Length = 351 Score = 288 bits (736), Expect = 1e-75, Method: Composition-based stats. Identities = 179/344 (52%), Positives = 237/344 (68%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D +RL +N + E P +W A+ L +ER L+ + ++++ L D Sbjct: 7 FGGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVQTLEQMSQGLEDV 66 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+E +D E L ++ ++ +F + SGE DS D Y+++ AG+GGTE Sbjct: 67 QGLLELAVEAEDEETFNEAVAELDVLEGKLGELEFRRMFSGEYDSADCYIDLQAGSGGTE 126 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA+ML+RMY RWAE + FKTE +E +GE AGIKS T+ + G A+GWL+ E GVHR Sbjct: 127 AQDWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAFGWLRTETGVHR 186 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS RRHTSFSS ++YP VDD I+I+I+ +D RID YRASGAGGQHVN T+SA Sbjct: 187 LVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESA 246 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG Sbjct: 247 VRITHIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQALEDNKSDIGWG 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 307 SQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDRFIEASLKA 349 >gi|258512512|ref|YP_003185946.1| hypothetical protein Aaci_2552 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479238|gb|ACV59557.1| conserved hypothetical protein [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 383 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 169/353 (47%), Positives = 235/353 (66%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++ +L G D R++ L P W + A+ ++ E + + + ++ + Sbjct: 15 MATRLADFGRSLDVAGKEHRIATLEALMAAPDFWDDPDRAQKIIAEMNGVKSVVDTMRRL 74 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D + L+LA EEDD + E + +++K E++ + + +LSGE D N+A LE+H Sbjct: 75 ESLLQDAEVALQLAQEEDDHDLFAEANRLAEQLKSEMDEFELQLMLSGEYDKNNAILELH 134 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+MLLRMYTRWAE +K E L+ GEEAGIKS TLL+KG NAYG+LK Sbjct: 135 PGAGGTESQDWASMLLRMYTRWAEDHGYKVEVLDYLPGEEAGIKSVTLLVKGHNAYGYLK 194 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQ 241 E+GVHRLVRISP+D++ RRHTSF+S+ V P + +D IEI + RIDTYR++GAGGQ Sbjct: 195 AEKGVHRLVRISPFDASGRRHTSFASVDVIPEIAEDDDSIEIRPEELRIDTYRSTGAGGQ 254 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG+VV CQ ERSQ +N+A+A +L+++L ++RE+ Sbjct: 255 HVNTTDSAVRITHIPTGIVVTCQSERSQIQNRARAMEILKSRLAAKRREEREQELAQLRG 314 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EI WG QIRSYV PY +VKD RTN E ++ V+DG++D F+ A L + Sbjct: 315 EQKEIAWGSQIRSYVFHPYSLVKDHRTNYETSNTQAVMDGEIDPFIHAYLRWQ 367 >gi|238787318|ref|ZP_04631117.1| Peptide chain release factor 2 [Yersinia frederiksenii ATCC 33641] gi|238724580|gb|EEQ16221.1| Peptide chain release factor 2 [Yersinia frederiksenii ATCC 33641] Length = 347 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 183/343 (53%), Positives = 237/343 (69%), Gaps = 1/343 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RL +N + E P +W A+ L +ER L+ ++ I ++ + D Sbjct: 4 GGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSALEEIVTTIDQLDQGMEDVS 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LLELA+E DD E L + ++ +F + SGE DS + YL++ AG+GGTE+ Sbjct: 64 GLLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQAGSGGTEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA+MLLRMY RWAE + FKTE +E DG+ AG+KSAT+ I G A+GWL+ E GVHRL Sbjct: 124 QDWASMLLRMYLRWAEAKGFKTEIIEESDGDVAGLKSATIKIIGDYAFGWLRTETGVHRL 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAV Sbjct: 184 VRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ + E +K++IGWG Sbjct: 244 RITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDNKSDIGWGS 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 304 QIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 345 >gi|300214843|gb|ADJ79259.1| Bacterial Peptide Chain Release Factor 2 [Lactobacillus salivarius CECT 5713] Length = 355 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 165/347 (47%), Positives = 230/347 (66%), Gaps = 1/347 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGGLFD D ++++ + +P W + +A+ ++ E L E+ + + D Sbjct: 2 NLGGLFDLDALEEKIAENEARMAEPGFWDDQEKAQEVIAENNDLKAKFETFHELAESISD 61 Query: 69 NLI-LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + L L DD + + +N Q + ++ Q LLS + D N+A LE+H GAGG Sbjct: 62 LEVSLELLQEIPDDEELQADLEENYQHAEKLLQSYQLNMLLSEKYDKNNAILEIHPGAGG 121 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TESQDW +MLLRMYTRWA + FK E ++ G++AGIKS TL+I+G NAYG+L+ E+GV Sbjct: 122 TESQDWGSMLLRMYTRWASQHDFKVETVDYQPGDDAGIKSVTLMIEGKNAYGYLRSERGV 181 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVRISP+DS RRHTSF+S+ V P +DDS+E+E+ D +++ +RASGAGGQH+N T Sbjct: 182 HRLVRISPFDSAGRRHTSFASVNVMPELDDSVEVELRPEDIKMEVFRASGAGGQHINKTS 241 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+ HIPTG+VV Q +RSQ +N+A A NMLRAKLY+LE++++E+ + + +IG Sbjct: 242 SAVRLIHIPTGIVVSSQAQRSQFQNRATAENMLRAKLYQLEMEEKEKQRAAIQGEQLDIG 301 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYV PY MVKD RT+ E + V+DGDLD F+ A L K Sbjct: 302 WGSQIRSYVFHPYSMVKDHRTDYETGNIQAVMDGDLDPFINAYLQWK 348 >gi|73540774|ref|YP_295294.1| peptide chain release factor 2 [Ralstonia eutropha JMP134] gi|72118187|gb|AAZ60450.1| bacterial peptide chain release factor 2 (bRF-2) [Ralstonia eutropha JMP134] Length = 357 Score = 287 bits (735), Expect = 1e-75, Method: Composition-based stats. Identities = 176/346 (50%), Positives = 248/346 (71%), Gaps = 1/346 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD+D V RL +N EDP +W N A+ L +E++ L+ +S + ++ D L Sbjct: 11 KIYGGIFDYDVKVGRLEEVNGLLEDPDVWNNPKRAQDLGKEKKALEGVVSVLGKLTDDLN 70 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L ELA EE D L+ +++ + V +F + +GE D +A++++ AGAGG Sbjct: 71 GADELFELAKEEGDDETLESIETDVKGFEEIVAGMEFRRMFAGEMDQANAFIDIQAGAGG 130 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DWA+MLLR Y ++ E++ FK E LE +G+ AGIKSAT+ I+G A+G+L+ E GV Sbjct: 131 TEACDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSATIKIEGEYAFGYLRTETGV 190 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS+ RHTSFSS++VYP VDDS E+E++ +D R+DTYRASGAGGQH+N TD Sbjct: 191 HRLVRKSPFDSSGGRHTSFSSVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTD 250 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTG+VVQCQ +RSQH+N+A+A +ML+++LYE E++KR+ A+ E+ KT++G Sbjct: 251 SAVRITHIPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYEHEMRKRQAEADKLEAGKTDVG 310 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 311 WGHQIRSYVLD-QSRIKDLRTNVEMSNTQKVLDGDLDPFIEASLKQ 355 >gi|78223569|ref|YP_385316.1| peptide chain release factor 2 [Geobacter metallireducens GS-15] gi|78194824|gb|ABB32591.1| bacterial peptide chain release factor 2 (bRF-2) [Geobacter metallireducens GS-15] Length = 364 Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats. Identities = 180/342 (52%), Positives = 235/342 (68%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GGLFD D+ + + + P W + +A+ L+RER ++ + + + D Sbjct: 12 GGLFDIDSKREDIQEMEAHIAAPGFWDDNEKAQQLLRERTRIEKILELWDRLTRQADDIR 71 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +L+EL E D L E +++ +VE +F+ +LSG D N Y ++AGAGGTE+ Sbjct: 72 VLIELGEEAGDEGTLDEVRALNDQLEKDVEGAEFQRMLSGTHDKNACYFSINAGAGGTEA 131 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMY R+ E++ +KTE + G+EAG+KSAT + G AYG+LK E G+HRL Sbjct: 132 QDWAEMLLRMYLRYCERKGWKTEITDYQGGDEAGVKSATFTVDGEYAYGYLKAEAGIHRL 191 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+DSN+RRHTSF+S++ +P ++D IE+ I+E+D RIDTYR+SGAGGQHVNTTDSAV Sbjct: 192 VRISPFDSNARRHTSFASVFAFPEIEDDIEVTINEADLRIDTYRSSGAGGQHVNTTDSAV 251 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIPTG+V Q ERSQH NKA A MLRAKLYE ELQ+RE A K EIGWG Sbjct: 252 RITHIPTGLVAASQCERSQHMNKATAMKMLRAKLYEKELQEREAKAAEIGGEKKEIGWGS 311 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL PY+MVKDLRT +E +P VLDGDL++F+ A L Sbjct: 312 QIRSYVLHPYKMVKDLRTGVETGNPDAVLDGDLEEFIVAFLM 353 >gi|51597475|ref|YP_071666.1| peptide chain release factor 2 [Yersinia pseudotuberculosis IP 32953] gi|81638630|sp|Q666T2|RF2_YERPS RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|51590757|emb|CAH22402.1| Peptide chain release factor 2 [Yersinia pseudotuberculosis IP 32953] Length = 366 Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats. Identities = 187/352 (53%), Positives = 241/352 (68%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGL-FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 LS + L G FD+D +RL +N + E P +W A+ L +ER L+ ++ I + Sbjct: 14 LSDRTAVLRGYLFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSTLEEIVTTIDQ 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D LLELA+E DD ET L+ + ++ +F + SGE D + YL++ Sbjct: 74 LEQGLEDVSGLLELAVEADDEETFNETIAELEVLDGKLGQLEFRRMFSGEYDRANCYLDL 133 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E DG+ AG+KSAT+ I G A+GWL Sbjct: 134 QAGSGGTEAQDWASMLLRMYLRWAESRGFKTEIIEESDGDVAGLKSATVKIIGEYAFGWL 193 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQ Sbjct: 194 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQ 253 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ + E Sbjct: 254 HVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLED 313 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 NKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 364 >gi|28373662|pdb|1MI6|A Chain A, Docking Of The Modified Rf2 X-Ray Structure Into The Low Resolution Cryo-Em Map Of Rf2 E.Coli 70s Ribosome Length = 365 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 184/351 (52%), Positives = 238/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYE+E+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYEVEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363 >gi|15803427|ref|NP_289460.1| peptide chain release factor 2 [Escherichia coli O157:H7 EDL933] gi|12517417|gb|AAG58019.1|AE005519_5 peptide chain release factor RF-2 [Escherichia coli O157:H7 str. EDL933] Length = 365 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 184/351 (52%), Positives = 237/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTS SS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSXSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363 >gi|292900474|ref|YP_003539843.1| peptide chain release factor 2 [Erwinia amylovora ATCC 49946] gi|291200322|emb|CBJ47450.1| peptide chain release factor 2 [Erwinia amylovora ATCC 49946] Length = 365 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 183/351 (52%), Positives = 240/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSTVLRGYLDYDAKKERLQEVNAELEQPDVWNEPDRAQALGKERSALEAVVETLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+E +D E L + ++ +F + SGE DS D Y+++ Sbjct: 74 TQGLEDVSGLLELAVEAEDEDTFNEAVAELDGLDKKLGELEFRRMFSGEYDSADCYMDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E DGE AG KSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGEVAGTKSATIKIIGDYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS+++YP VDD+I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+ LRAKLYE E+QK+ E + Sbjct: 254 VNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQTAEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT++E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 363 >gi|93005664|ref|YP_580101.1| peptide chain release factor 2 [Psychrobacter cryohalolentis K5] gi|92393342|gb|ABE74617.1| bacterial peptide chain release factor 2 (bRF-2) [Psychrobacter cryohalolentis K5] Length = 349 Score = 287 bits (734), Expect = 2e-75, Method: Composition-based stats. Identities = 186/343 (54%), Positives = 241/343 (70%), Gaps = 1/343 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RL +N + E+P LW + A + +E+ LD I + ++ L D Sbjct: 6 GGIFDFDGKQERLEEVNLELENPELWNDPERATKINKEKSQLDGVIDVVVSLETTLEDAS 65 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +LELA+E +D S+L + L + V +F + SGE D N+ YL++ +G+GGTE+ Sbjct: 66 AMLELAVEAEDESLLADVQAELDNAEKRVADLEFRRMFSGEMDPNNCYLDIQSGSGGTEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRWAE FK E +E+ G AGIKSAT+ IKG A+GWL+ E GVHRL Sbjct: 126 QDWAEMLLRMYTRWAEAHGFKVEVIEVSSGSVAGIKSATIEIKGNYAFGWLRTEIGVHRL 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DSN+ RHTSF++++V P +DD+IEI+I+ +D RIDTYR+SGAGGQHVNTTDSAV Sbjct: 186 VRKSPFDSNNGRHTSFAAVFVSPEIDDNIEIDINPADLRIDTYRSSGAGGQHVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH P+GVVV CQ ERSQH NKA A MLRAKLYELE+QKR E E K+++GWG Sbjct: 246 RITHEPSGVVVTCQNERSQHGNKATAMKMLRAKLYELEMQKRMESQQAVEDGKSDVGWGS 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 306 QIRSYVLDD-SRIKDLRTGVETFNTGAVLDGDLDQFIEASLKA 347 >gi|317405230|gb|EFV85568.1| peptide chain release factor 2 [Achromobacter xylosoxidans C54] Length = 386 Score = 287 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 173/345 (50%), Positives = 246/345 (71%), Gaps = 1/345 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 GG+FD+D +RL +N + EDP +W + A+ L RE++ L++ + + + L D Sbjct: 41 LYGGIFDYDAKAERLQVVNAELEDPAVWNDPKHAQDLGREKKALEDVVETLTGLGTGLAD 100 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 + L ELA ++D + L+ + + ++E +F + S AD + +L++ AGAGGT Sbjct: 101 SNELFELAAADNDDATLESIELDANGFQEKLESLEFRRMFSNPADPLNCFLDIQAGAGGT 160 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDWA+MLLR Y ++AE++ FK E LE +GE AGIKSAT+ ++G A+G+L+ E GVH Sbjct: 161 EAQDWASMLLRQYLKYAERKGFKAEVLEESEGEVAGIKSATIKLEGEYAFGYLRTETGVH 220 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DS+ RHTSF+S++VYP VDDS E+E++ +D R+DTYRASGAGGQH+N TDS Sbjct: 221 RLVRKSPFDSSGGRHTSFASVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTDS 280 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+THIPTG+VVQCQ +RSQH+N+A+A ML++KLYELE++ R E SKT++GW Sbjct: 281 AVRLTHIPTGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMAEQQKLEDSKTDVGW 340 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 G QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 341 GHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQ 384 >gi|90962160|ref|YP_536076.1| peptide chain release factor 2 [Lactobacillus salivarius UCC118] gi|301301257|ref|ZP_07207412.1| peptide chain release factor 2 [Lactobacillus salivarius ACS-116-V-Col5a] gi|90821354|gb|ABD99993.1| Bacterial Peptide Chain Release Factor 2 [Lactobacillus salivarius UCC118] gi|300851133|gb|EFK78862.1| peptide chain release factor 2 [Lactobacillus salivarius ACS-116-V-Col5a] Length = 355 Score = 287 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 165/347 (47%), Positives = 230/347 (66%), Gaps = 1/347 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGGLFD D ++++ + +P W + +A+ ++ E L E+ + + D Sbjct: 2 NLGGLFDLDALEEKIAENEARMAEPGFWDDQEKAQEVIAENNDLKAKFETFHELAESISD 61 Query: 69 N-LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + L L DD + + +N Q + ++ Q LLS + D N+A LE+H GAGG Sbjct: 62 LGVSLELLQEIPDDEELQADLEENYQHAEKLLQSYQLNMLLSEKYDKNNAILEIHPGAGG 121 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TESQDW +MLLRMYTRWA + FK E ++ G++AGIKS TL+I+G NAYG+L+ E+GV Sbjct: 122 TESQDWGSMLLRMYTRWASQHDFKVETVDYQPGDDAGIKSVTLMIEGKNAYGYLRSERGV 181 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVRISP+DS RRHTSF+S+ V P +DDS+E+E+ D +++ +RASGAGGQH+N T Sbjct: 182 HRLVRISPFDSAGRRHTSFASVNVMPELDDSVEVELRPEDIKMEVFRASGAGGQHINKTS 241 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+ HIPTG+VV Q +RSQ +N+A A NMLRAKLY+LE++++E+ + + +IG Sbjct: 242 SAVRLIHIPTGIVVSSQAQRSQFQNRATAENMLRAKLYQLEMEEKEKQRAAIQGEQLDIG 301 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYV PY MVKD RT+ E + V+DGDLD F+ A L K Sbjct: 302 WGSQIRSYVFHPYSMVKDHRTDYETGNIQAVMDGDLDPFINAYLQWK 348 >gi|261855042|ref|YP_003262325.1| hypothetical protein Hneap_0421 [Halothiobacillus neapolitanus c2] gi|261835511|gb|ACX95278.1| hypothetical protein Hneap_0421 [Halothiobacillus neapolitanus c2] Length = 365 Score = 287 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 175/350 (50%), Positives = 245/350 (70%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL ++ + E P +W + A+ L +ER L+ + + + Sbjct: 14 LSARAAALRGYLDFDVKKERLEEVDRELEVPDVWNDPARAQALGKERASLERVVHTLANM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN LLE+A EEDD + + ++ + ++ +F + SGE D ++AYL++ Sbjct: 74 AQGLNDNADLLEMAAEEDDEATVASIEKDVVEFEKQIADLEFRRMFSGEMDESNAYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDWA++L+RMY RW ++R FKTE +E+ DGE AGIKSAT+ +G A+GWL+ Sbjct: 134 SGAGGTESQDWASILMRMYLRWGDRRGFKTEVMEMSDGEVAGIKSATIRFEGEYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS++RRHTSF+S++V P VDD+IEIE++ +D R+D +RASGAGGQH Sbjct: 194 TEIGVHRLVRKSPFDSDNRRHTSFASVFVSPEVDDNIEIEVNPADLRVDVFRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVR TH+PTGVVV CQ ERSQ +N+ +A ML+AKLYELE+QKR ++ E + Sbjct: 254 VNRTESAVRFTHLPTGVVVACQAERSQIQNRERAMKMLKAKLYELEVQKRNAVSQALEDT 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K+++ WG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 314 KSDVSWGNQIRSYVLD-QSRIKDLRTGHETGNTQAVLDGDLDPFIEASLK 362 >gi|225867150|ref|YP_002752528.1| peptide chain release factor 2, programmed frameshift [Bacillus cereus 03BB102] gi|225787101|gb|ACO27318.1| peptide chain release factor 2, programmed frameshift [Bacillus cereus 03BB102] Length = 380 Score = 287 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 170/353 (48%), Positives = 228/353 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L G ++++ L K W + A+ ++ E L + + ++ Sbjct: 27 KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 86 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + I EL EE D + +E ++ + E+ + + LLS D N+A LE+ Sbjct: 87 LDETFENLEITHELLKEEYDEELHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAEKR FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +D +EIE+ D +IDTYRASGAGGQ Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 266 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PT VV CQ ERSQ KN+ A ML+AKLY+ +L++++ + Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY +VKD RTN E + V+DG++D F+ A L + Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379 >gi|218900306|ref|YP_002448717.1| peptide chain release factor 2, programmed frameshift [Bacillus cereus G9842] gi|218544557|gb|ACK96951.1| peptide chain release factor 2, programmed frameshift [Bacillus cereus G9842] Length = 380 Score = 287 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 169/353 (47%), Positives = 228/353 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L G ++++ L K W + A+ ++ E L + + ++ Sbjct: 27 KMAKRLAAFRGSLCLPTKEKQIAELEEKMMSAGFWDDQQGAQAVINEANALKDMVGSFRQ 86 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + + EL EE D + +E ++ + E+ + + LLS D N+A LE+ Sbjct: 87 LDETFENLEVTHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAEKR FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +D +EIE+ D +IDTYRASGAGGQ Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 266 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PT VV CQ ERSQ KN+ A ML+AKLY+ +L++++ + Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAQLDEIRG 326 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY +VKD RTN E + V+DG++D F+ A L + Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379 >gi|172058432|ref|YP_001814892.1| peptide chain release factor 2 [Exiguobacterium sibiricum 255-15] gi|229576666|sp|B1YLH0|RF2_EXIS2 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|171990953|gb|ACB61875.1| peptide chain release factor 2 [Exiguobacterium sibiricum 255-15] Length = 366 Score = 287 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 167/351 (47%), Positives = 231/351 (65%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + ++L+ D + + R+ L + P W N A+ ++ E L + + + Sbjct: 13 MEKKLDEYKASLDLETKISRIEELENEMTYPDFWNNQESAQKVIDESNGLKAMVDKYQHL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 D + ++ EL EE D + +E L IK + + + + LL+GE D+N+A LE+H Sbjct: 73 ADGHENIVLTYELIKEEPDVELQEELESELGDIKKKFDEFELQILLNGEYDANNAILELH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+MLLRMY R+ +K+ +K E ++ G+EAG+KS TL I+G NAYG+LK Sbjct: 133 PGAGGTESQDWASMLLRMYQRFCDKQGWKVETMDYQPGDEAGVKSVTLRIQGHNAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+G+HRLVRISP+DS+ RRHTSF S V P +D I+IEI D R+DTYRASGAGGQH Sbjct: 193 AEKGIHRLVRISPFDSSGRRHTSFVSCDVMPEFNDDIDIEIRTEDLRVDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +NTTDSAVRITH+PTGVVV CQQERSQ KN+ A ML+AKLY+ E++++++ + Sbjct: 253 INTTDSAVRITHVPTGVVVSCQQERSQIKNREAAMKMLKAKLYQREIEEKQKKLDEIRGE 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++I WG QIRSYV PY MVKD RTN E + +DGD+ F+ A L + Sbjct: 313 KSDIAWGSQIRSYVFHPYSMVKDHRTNYEVGNTQGAMDGDIMGFIDAYLRL 363 >gi|298291326|ref|YP_003693265.1| peptide chain release factor 2 [Starkeya novella DSM 506] gi|296927837|gb|ADH88646.1| peptide chain release factor 2 [Starkeya novella DSM 506] Length = 376 Score = 287 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 213/353 (60%), Positives = 267/353 (75%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ L D+D + RL+ LN EDP+LW + A+ LM+ER L++ + I+ Sbjct: 11 EIREAAGLLRQHIDFDRSKARLAELNALAEDPNLWNDPERAQKLMQERGTLEDGLGAIER 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I L DN+ L+EL E D SI+ E + L R+K EV +Q E+LLSGEADSND+YLEV Sbjct: 71 INRELADNVELIELGEAEGDDSIVDEAAAALDRLKAEVARRQLEALLSGEADSNDSYLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGT+SQDWA MLLRMYTRWAE+R FK E +E GE AG+KSAT+L+KG NAYGWL Sbjct: 131 HAGAGGTDSQDWALMLLRMYTRWAERRGFKVELIEEQAGETAGLKSATMLVKGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DSN+RR TSF+SI VYPV+DD I ++I E+D R+DT R+ GAGGQ Sbjct: 191 KTEGGVHRLVRISPFDSNARRQTSFASIDVYPVIDDRIVVDIKEADVRVDTMRSGGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVR+THIPTG+ V Q +RSQHKN+A AW+MLRAKLYE+EL+KRE A ++ Sbjct: 251 HVNKTESAVRLTHIPTGIAVVSQGDRSQHKNRATAWDMLRAKLYEMELKKREAQAAADQA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +KT+IGWG QIRSYVLQPYQ+VKDLRT + +P +VLDGDLD FM+A LA + Sbjct: 311 AKTDIGWGHQIRSYVLQPYQLVKDLRTGVTSGTPQEVLDGDLDPFMEAALAQR 363 >gi|887841|gb|AAA83072.1| peptide chain release factor 2 (RF-2) [Escherichia coli] Length = 365 Score = 287 bits (733), Expect = 2e-75, Method: Composition-based stats. Identities = 182/351 (51%), Positives = 235/351 (66%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHR VR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YR SGAGGQH Sbjct: 194 TETGVHRXVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRTSGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK Q ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQXMKQMKAKLYELEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363 >gi|283788451|ref|YP_003368316.1| peptide chain release factor 2 (RF-2) [Citrobacter rodentium ICC168] gi|282951905|emb|CBG91623.1| peptide chain release factor 2 (RF-2) [Citrobacter rodentium ICC168] Length = 365 Score = 287 bits (733), Expect = 3e-75, Method: Composition-based stats. Identities = 185/351 (52%), Positives = 237/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 AQGLEDVSGLLELAVEADDEETFNEAVAELDMLEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKISGEYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363 >gi|254491393|ref|ZP_05104572.1| peptide chain release factor 2 [Methylophaga thiooxidans DMS010] gi|224462871|gb|EEF79141.1| peptide chain release factor 2 [Methylophaga thiooxydans DMS010] Length = 348 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 184/346 (53%), Positives = 249/346 (71%), Gaps = 1/346 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + GG+FD+D+ ++L + + E P +W + A+ L +ER L+ ++ + +D L Sbjct: 1 MTISGGIFDYDDKAEQLVEVTRELESPSVWDDPDRAQKLGQERASLEKIVTTLSSHRDTL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LLELA+EE+D + +L ++ +E +F+ + SG+ D N AY+++ +G+G Sbjct: 61 EDAKDLLELAVEENDQETFDAITADLDELEKGLEKLEFQRMFSGKLDKNSAYIDIQSGSG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWAN+LLRMY RW E + +K E +E+ GE AGIKSAT+ ++G A+G L+ E G Sbjct: 121 GTEAQDWANILLRMYLRWGESQDYKVELMEVSAGEVAGIKSATIRMEGEYAFGMLRTETG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR SP+DS +RRHTSF+SI+VYP VDD+IEI+I+ +D R+DTYRASGAGGQHVNTT Sbjct: 181 VHRLVRKSPFDSGARRHTSFASIFVYPEVDDTIEIDINPADLRVDTYRASGAGGQHVNTT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSA+RITH PT +VVQCQ ERSQHKNK QA N LRAKLYELELQK+ E+ E SK++I Sbjct: 241 DSAIRITHEPTNIVVQCQNERSQHKNKDQAMNQLRAKLYELELQKQNEVKQAAEESKSDI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 GWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 301 GWGSQIRSYVLD-QSRIKDLRTGVETGNTQAVLDGDLDQFIEASLK 345 >gi|157373979|ref|YP_001472579.1| peptide chain release factor 2 [Shewanella sediminis HAW-EB3] gi|157316353|gb|ABV35451.1| peptide chain release factor 2 [Shewanella sediminis HAW-EB3] Length = 352 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 173/342 (50%), Positives = 232/342 (67%), Gaps = 1/342 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RL + + E +W N A+ L +ER L+ + I ++ L D Sbjct: 9 GGIFDYDAKKERLEEVCAELESAEVWSNPENAQALGKERSSLEVIVKTIDDMDSGLEDVQ 68 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L+ELA+EEDD + S L ++ +E +F + SG D D YL++ +G+GGTE+ Sbjct: 69 DLVELAVEEDDEETFDDASTELDGLEKRLEELEFRRMFSGPHDVADCYLDIQSGSGGTEA 128 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWANM+LRM+ RW + +K E +E+ DG+ AGIK AT+ G A+G L+ E GVHRL Sbjct: 129 QDWANMVLRMFLRWGDAHDYKPELIEVTDGDVAGIKGATIKFTGEYAFGSLRTETGVHRL 188 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQHVN T+SA+ Sbjct: 189 VRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQHVNKTESAI 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH+PT VVQCQ +RSQHKN+ A L+AKLYELE+ K+ E SK++IGWG Sbjct: 249 RITHVPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNADKQAAEDSKSDIGWGS 308 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 309 QIRSYVLDD-ARIKDLRTGVESRNTQSVLDGDLDKFIEASLK 349 >gi|315499977|ref|YP_004088780.1| peptide chain release factor 2 [Asticcacaulis excentricus CB 48] gi|315417989|gb|ADU14629.1| peptide chain release factor 2 [Asticcacaulis excentricus CB 48] Length = 373 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 207/352 (58%), Positives = 253/352 (71%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + + L DWD A++RL LN + EDP LW EA+ +MRER L + + + Sbjct: 12 IEQSIGLLRRRLDWDVALRRLDELNARVEDPTLWDKPEEAQSVMRERTKLSGGVDAVNSL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D L ELA E D +L+E L+ IK + + E+LLSGEAD NDAY+E++ Sbjct: 72 TKELQDALDYAELADMEGDEELLEEARAMLKAIKEKAARAELEALLSGEADGNDAYVEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTES DWA +LLRMYTRWA + E GE+AGIKSAT+++KG NAYGWLK Sbjct: 132 SGAGGTESCDWAGILLRMYTRWATQHGMTVSIEEETPGEQAGIKSATIMVKGTNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DSN+RRHTSF+S+WVYPVVDD+I I+I+ +D R DTYRASGAGGQH Sbjct: 192 TEAGVHRLVRISPFDSNARRHTSFASVWVYPVVDDTIVIDINPADVRTDTYRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSAVR+THIPTG+ V CQ RSQH N+ +AW MLRA+LYELELQKRE E Sbjct: 252 VNKTDSAVRLTHIPTGIAVACQAGRSQHANRDEAWKMLRARLYELELQKREAAQAALEDQ 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT+IGWG QIRSYVLQPYQMVKDLRT++E + VLDGDLD FM A+LA + Sbjct: 312 KTDIGWGHQIRSYVLQPYQMVKDLRTDVETSDSQGVLDGDLDAFMGASLAQR 363 >gi|56459931|ref|YP_155212.1| protein chain release factor B, RF-2 [Idiomarina loihiensis L2TR] gi|56178941|gb|AAV81663.1| Protein chain release factor B, RF-2 [Idiomarina loihiensis L2TR] Length = 351 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 182/343 (53%), Positives = 240/343 (69%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+D ++RL + + E P++W + +A+ L +ER L+ + + ++Q L D Sbjct: 7 LGGIFDYDAKLERLEEVTREMEQPNVWDDPPKAQALGKERAALEQVVQTLDKLQQGLDDV 66 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L++LA+E +D E + L + ++E +F + S + DS D YL++ +G+GGTE Sbjct: 67 EGLVDLAVEAEDEDTFNEAHEELSGLVKQLEALEFRRMFSKDNDSADCYLDIQSGSGGTE 126 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANMLLRMY RWAE FK E E+ +G+ AGIKSAT+ + G AYGWL+ E GVHR Sbjct: 127 AQDWANMLLRMYLRWAEAHDFKAEITELSEGDVAGIKSATVRVVGEYAYGWLRTETGVHR 186 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS +RRHTSF+S++VYP VDD I+IEI SD R+DTYRASGAGGQHVN TDSA Sbjct: 187 LVRKSPFDSGNRRHTSFASVFVYPEVDDDIDIEIDPSDLRVDTYRASGAGGQHVNRTDSA 246 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+TH PTG+VVQCQ +RSQHKN+ A L+AKLYE ELQK+ E E SK +IGWG Sbjct: 247 VRLTHEPTGIVVQCQSDRSQHKNRDSAMKQLKAKLYEFELQKQNEEKQALEDSKADIGWG 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT IE + VLDG LD F++A+L Sbjct: 307 SQIRSYVLDD-ARIKDLRTGIENRNTQAVLDGALDPFIEASLK 348 >gi|242372989|ref|ZP_04818563.1| peptide chain release factor 2 [Staphylococcus epidermidis M23864:W1] gi|242349315|gb|EES40916.1| peptide chain release factor 2 [Staphylococcus epidermidis M23864:W1] Length = 386 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 167/355 (47%), Positives = 232/355 (65%), Gaps = 1/355 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 M + L LGGLFD +N + DP W + +A+ ++ + L + ++ Sbjct: 26 MNIRITLTKLGGLFDLENKETNIQEYEEMMADPGFWDDQNKAQDIIDKNNALKSIVNGYH 85 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 ++ + + D EL EE D + E + + + K +++ + + LL G D+N+A LE Sbjct: 86 DLANEVEDMSATRELLQEEYDEDMKAELEEEVIQFKEKMDQYELQLLLDGPHDANNAILE 145 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +H GAGGTESQDWA+MLLRMY R+ E++ FK E ++ G+EAG+KS TLLIKG NAYG+ Sbjct: 146 LHPGAGGTESQDWASMLLRMYQRYGEQKGFKVETVDYLPGDEAGVKSVTLLIKGHNAYGY 205 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAG 239 LK E+GVHRLVRISP+DS+ RRHTSF+S V P +D IEIEI+ D +DT+RASGAG Sbjct: 206 LKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFDNDEIEIEINPDDITVDTFRASGAG 265 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQH+N T+SA+RITH PTG+VV Q ERSQ KN+ A ML++KLY+L+L+++E Sbjct: 266 GQHINKTESAIRITHHPTGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQEREMAEI 325 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY MVKD RTN E V+DG+++ F++A L + Sbjct: 326 RGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGEIEPFIEAYLRKE 380 >gi|260599230|ref|YP_003211801.1| peptide chain release factor 2 [Cronobacter turicensis z3032] gi|260218407|emb|CBA33491.1| Peptide chain release factor 2 [Cronobacter turicensis z3032] Length = 342 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 183/341 (53%), Positives = 236/341 (69%), Gaps = 1/341 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 +FD+D +RL +N + E P +W A+ L +ER L+ + + ++ L D L Sbjct: 1 MFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVETLDQMSQGLDDVAGL 60 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 LELA+E DD E L +++ ++ +F + SGE DS D YL++ AG+GGTE+QD Sbjct: 61 LELAVEADDEETFNEAVVELDQLEAKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQD 120 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA+MLLRMY RWAE R FKTE +E +GE AG+KSAT+ I G A+GWL+ E GVHRLVR Sbjct: 121 WASMLLRMYLRWAEARGFKTEIIEESEGEVAGLKSATIKISGDYAFGWLRTETGVHRLVR 180 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 SP+DS RRHTSFSS +VYP V+D I+IEI+ +D RID YRASGAGGQHVN T+SAVRI Sbjct: 181 KSPFDSGGRRHTSFSSAFVYPEVEDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRI 240 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 THIPTG V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG QI Sbjct: 241 THIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQALEDNKSDIGWGSQI 300 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 RSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 301 RSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 340 >gi|126173117|ref|YP_001049266.1| peptide chain release factor 2 [Shewanella baltica OS155] gi|153002001|ref|YP_001367682.1| peptide chain release factor 2 [Shewanella baltica OS185] gi|304410531|ref|ZP_07392149.1| peptide chain release factor 2 [Shewanella baltica OS183] gi|307304624|ref|ZP_07584374.1| peptide chain release factor 2 [Shewanella baltica BA175] gi|125996322|gb|ABN60397.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella baltica OS155] gi|151366619|gb|ABS09619.1| peptide chain release factor 2 [Shewanella baltica OS185] gi|304351015|gb|EFM15415.1| peptide chain release factor 2 [Shewanella baltica OS183] gi|306912026|gb|EFN42450.1| peptide chain release factor 2 [Shewanella baltica BA175] Length = 352 Score = 286 bits (732), Expect = 3e-75, Method: Composition-based stats. Identities = 175/343 (51%), Positives = 233/343 (67%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+D +RL + + E +W + A+ L +ER L+ + I ++ L D Sbjct: 8 LGGIFDYDAKNERLEEVTRELESSEVWNDPERAQALGKERASLEAVVKTIDDMDSGLEDV 67 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+EE+D ETS L ++ + +F + SG D+++ YL++ +G+GGTE Sbjct: 68 EGLLELAIEEEDEDTFNETSKELDYLESRLADLEFRRMFSGPQDASNCYLDIQSGSGGTE 127 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANM+LRMY RW E F E +E+ DG+ AGIK AT+ G A+GWL+ E GVHR Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS+ RRHTSF S++VYP +DD I I+I+ SD RIDTYRASGAGGQHVN T+SA Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPSDLRIDTYRASGAGGQHVNKTESA 247 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 +RITH+PT VVQCQ +RSQHKNK A L+AKL+ELE+ K+ E +K++IGWG Sbjct: 248 IRITHLPTNTVVQCQNDRSQHKNKDAAMKQLKAKLFELEMLKQNADKQAAEDAKSDIGWG 307 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT +E S VLDGDLD F++A+L Sbjct: 308 SQIRSYVLDD-ARIKDLRTGVENRSTQAVLDGDLDKFIEASLK 349 >gi|302037377|ref|YP_003797699.1| peptide chain release factor 2 [Candidatus Nitrospira defluvii] gi|300605441|emb|CBK41774.1| Peptide chain release factor 2 (RF-2) [Candidatus Nitrospira defluvii] Length = 377 Score = 286 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 176/343 (51%), Positives = 233/343 (67%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 GG+FD L+ + KT P W++ A + R + LD +S ++ + R D Sbjct: 15 NYGGIFDLARMTAELNDIEVKTSQPDFWKDTQAAAKVNRRKAALDRELSRWRDTERRQND 74 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 LLELALE D + QE L+ + V + E LLSGE DS++A +H GAGGT Sbjct: 75 IEALLELALESGDAGLEQELLAELEPFEKAVAQFRIELLLSGELDSSNAIFAIHPGAGGT 134 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 ESQDWA MLLRMY RWAE++ FK E L++ G+EAGIKSATL + GP AYG+LK E GVH Sbjct: 135 ESQDWAQMLLRMYVRWAEQKGFKVETLDLLAGDEAGIKSATLSVSGPYAYGYLKAEAGVH 194 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVRISP+D+N RRHTSF+S++VYP ++D +++ I + D R+DT+RA GAGGQ+VN ++ Sbjct: 195 RLVRISPFDANKRRHTSFASVFVYPELEDDVQVVIDDKDLRVDTFRAGGAGGQNVNKVET 254 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 A+RITHIPTG+VVQCQ ERSQ +N+ A +L+A+L+E+E +K+E N K +I W Sbjct: 255 AIRITHIPTGIVVQCQNERSQLQNRNGAMKILKARLFEVEQRKKEAEFNAIVGEKKDIAW 314 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G QIRSYV QPYQMVKD RT E S V+DG+LD F++A L Sbjct: 315 GSQIRSYVFQPYQMVKDHRTGYEVGQVSAVMDGELDGFIEAYL 357 >gi|227891182|ref|ZP_04008987.1| peptide chain release factor 2 [Lactobacillus salivarius ATCC 11741] gi|227867056|gb|EEJ74477.1| peptide chain release factor 2 [Lactobacillus salivarius ATCC 11741] Length = 355 Score = 286 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 165/347 (47%), Positives = 230/347 (66%), Gaps = 1/347 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGGLFD D ++++ + +P W + +A+ ++ E L E+ + + D Sbjct: 2 NLGGLFDLDALEEKIAENEARMAEPGFWDDQEKAQEVIAENNDLKAKFETFHELAESISD 61 Query: 69 N-LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + L L DD + + +N Q + ++ Q LLS + D N+A LE+H GAGG Sbjct: 62 LGVSLELLQEIPDDEELQADLEENYQHAEKLLQSYQLNMLLSEKYDKNNAILEIHPGAGG 121 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TESQDW +MLLRMYTRWA + FK E ++ G++AGIKS TL+I+G NAYG+L+ E+GV Sbjct: 122 TESQDWGSMLLRMYTRWASQHDFKVETVDYQPGDDAGIKSVTLMIEGKNAYGYLRSERGV 181 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVRISP+DS RRHTSF+S+ V P +DDS+E+E+ D +++ +RASGAGGQH+N T Sbjct: 182 HRLVRISPFDSAGRRHTSFASVNVMPELDDSVEVELRPEDIKMEVFRASGAGGQHINKTS 241 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+ HIPTG+VV Q +RSQ +N+A A NMLRAKLY+LE++++E+ + + +IG Sbjct: 242 SAVRLIHIPTGIVVSSQAQRSQFQNRATAENMLRAKLYQLEVEEKEKQRAAIQGEQLDIG 301 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYV PY MVKD RT+ E + V+DGDLD F+ A L K Sbjct: 302 WGSQIRSYVFHPYSMVKDHRTDYETGNIQAVMDGDLDPFINAYLQWK 348 >gi|194289273|ref|YP_002005180.1| peptide chain release factor rf-2 [Cupriavidus taiwanensis LMG 19424] gi|193223108|emb|CAQ69113.1| peptide chain release factor RF-2 [Cupriavidus taiwanensis LMG 19424] Length = 357 Score = 286 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 177/346 (51%), Positives = 247/346 (71%), Gaps = 1/346 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD+D V RL +N EDP +W N A+ L +E++ L+ + + ++ D L Sbjct: 11 KIYGGIFDYDVKVGRLDEVNGLLEDPDVWNNPKRAQDLGKEKKMLEGVVGVLGKLTDDLV 70 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L ELA EE D L+ +++ + V +F + SGE D +A++++ AGAGG Sbjct: 71 GAEELFELAKEEGDDDTLESIEADVKGFEAVVADMEFRRMFSGEMDQANAFIDIQAGAGG 130 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DWA+MLLR Y ++ E++ FK E LE +G+ AGIKSAT+ I+G A+G+L+ E GV Sbjct: 131 TEACDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSATIKIEGEYAFGYLRTETGV 190 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS+ RHTSFSS++VYP VDDS E+EI+ +D R+DTYRASGAGGQH+N TD Sbjct: 191 HRLVRKSPFDSSGGRHTSFSSVFVYPEVDDSFEVEINPADLRVDTYRASGAGGQHINKTD 250 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTG+VVQCQ +RSQH+N+A+A +ML+++LYE E++KR+ A+ E+ KT++G Sbjct: 251 SAVRITHIPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYEHEMRKRQAEADKLEAGKTDVG 310 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 311 WGHQIRSYVLD-QSRIKDLRTNVEMSNTQKVLDGDLDPFIEASLKQ 355 >gi|217420389|ref|ZP_03451894.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei 576] gi|226195477|ref|ZP_03791065.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei Pakistan 9] gi|237813009|ref|YP_002897460.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei MSHR346] gi|238561621|ref|ZP_00441741.2| peptide chain release factor 2, programmed frameshift [Burkholderia mallei GB8 horse 4] gi|242317384|ref|ZP_04816400.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei 1106b] gi|251767233|ref|ZP_04820018.1| peptide chain release factor 2, programmed frameshift [Burkholderia mallei PRL-20] gi|284159918|ref|YP_001059616.2| peptide chain release factor 2, programmed [Burkholderia pseudomallei 668] gi|217395801|gb|EEC35818.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei 576] gi|225932437|gb|EEH28436.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei Pakistan 9] gi|237504244|gb|ACQ96562.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei MSHR346] gi|238524226|gb|EEP87660.1| peptide chain release factor 2, programmed frameshift [Burkholderia mallei GB8 horse 4] gi|242140623|gb|EES27025.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei 1106b] gi|243063468|gb|EES45654.1| peptide chain release factor 2, programmed frameshift [Burkholderia mallei PRL-20] gi|261825971|gb|ABN00993.2| peptide chain release factor 2, programmed frameshift [Burkholderia mallei NCTC 10229] gi|261835054|gb|ABO05438.2| peptide chain release factor 2, programmed frameshift [Burkholderia mallei NCTC 10247] gi|283775112|gb|ABN84239.2| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei 668] Length = 367 Score = 286 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 179/351 (50%), Positives = 250/351 (71%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L R+ L G +D +RL+ +N + EDP++W + A+ L RE++ L++ ++ + + Sbjct: 16 LRRRAGELRGYLCYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLESVVTTLTAL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L ELA EE D L T + +++ V +F + S AD N+ ++++ Sbjct: 76 DNDLRDAQDLFELAHEEGDEETLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++L+E EL+KR+ + ESS Sbjct: 256 INKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESS 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KT++GWG QIRSYVL VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 316 KTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTKAVLDGDLDDFISASLKQ 365 >gi|90020863|ref|YP_526690.1| peptide chain release factor 2 [Saccharophagus degradans 2-40] gi|89950463|gb|ABD80478.1| bacterial peptide chain release factor 2 (bRF-2) [Saccharophagus degradans 2-40] Length = 347 Score = 286 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 178/345 (51%), Positives = 241/345 (69%), Gaps = 1/345 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 CLGG+F++ +RL+ + + +P +W + A+ L ER L+ + I+ +++ + D Sbjct: 2 CLGGIFEYAEKKERLAEVELELAEPDVWDDPARAQALGSERSSLELVVETIETLENGVAD 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 LLE+A+EE D E R++ + +F + SGE D N+AYL++ AG+GGT Sbjct: 62 CRELLEMAIEESDEDSFLEICSEADRLEAHLATLEFRRMFSGEMDPNNAYLDIQAGSGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDWA MLLRMY RW E + FKT E G+ AGIKSAT+ +G A+GWL+ E GVH Sbjct: 122 EAQDWAEMLLRMYLRWGEDKGFKTTLEEASAGDVAGIKSATIRFEGEYAFGWLRTETGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DS +RRHTSFSS++V P +DD+I+IEI+++D R DTYRASGAGGQHVN TDS Sbjct: 182 RLVRKSPFDSGNRRHTSFSSVFVSPEIDDNIDIEINKADVREDTYRASGAGGQHVNKTDS 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+TH PTG+VVQCQ ERSQH N+ +AW MLRA++YE E+QKR E SK++IGW Sbjct: 242 AVRLTHAPTGIVVQCQSERSQHSNRDKAWKMLRARVYEQEMQKRNAEKQALEDSKSDIGW 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 G QIRSYVL +KDLRTN++ ++ + VLDG LDDF+ A+L Sbjct: 302 GSQIRSYVLDDQ-RIKDLRTNVQTSNCNAVLDGKLDDFIVASLKA 345 >gi|326794289|ref|YP_004312109.1| peptide chain release factor 2 [Marinomonas mediterranea MMB-1] gi|326545053|gb|ADZ90273.1| Peptide chain release factor 2 [Marinomonas mediterranea MMB-1] Length = 364 Score = 286 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 178/351 (50%), Positives = 244/351 (69%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L G D+D +RL ++ + EDP +W + A+ L +ER L+ + + + Sbjct: 13 LSERSQILRGYLDYDAKKERLEEVSRELEDPEIWNDPEYAQKLGKERSTLEAVVETLDNL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + D+ LL++A+EEDD ++ L + ++ +F + SGE D+N A+L++ Sbjct: 73 ESGVEDSKDLLDMAVEEDDADSVEAVELELNDLDEQLAKLEFRRMFSGEMDANSAFLDIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +G+GGTE+QDWANMLLRMY RW E + FK E +E+ +GE AGIKSAT+ +G A+GWL+ Sbjct: 133 SGSGGTEAQDWANMLLRMYLRWGEDKGFKVELMEVSEGEVAGIKSATVRFEGEYAFGWLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSF+S+++ P +DD++EI+I+ +D RIDTYR+SGAGGQH Sbjct: 193 TETGVHRLVRKSPFDSGNRRHTSFASVFLSPEIDDNVEIDINPADLRIDTYRSSGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT VVQCQ +RSQH NK A LRAKLYELE+ KR E A E + Sbjct: 253 VNTTDSAVRITHVPTNTVVQCQNQRSQHANKDFAMKQLRAKLYELEMLKRTEAAQALEDT 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E T+ VLDG LD F+ A+L Sbjct: 313 KSDIGWGSQIRSYVLD-SSRIKDLRTGVESTNTGSVLDGSLDQFIVASLKQ 362 >gi|316934390|ref|YP_004109372.1| peptide chain release factor 2 [Rhodopseudomonas palustris DX-1] gi|315602104|gb|ADU44639.1| peptide chain release factor 2 [Rhodopseudomonas palustris DX-1] Length = 376 Score = 286 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 217/353 (61%), Positives = 273/353 (77%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + + L D D + RL+ LN EDP+LW + +A+ LM+ER L++A++ I + Sbjct: 11 EIKQSVGLLRRHLDVDQSTVRLAELNKLAEDPNLWNDPQKAQKLMQERTSLEDALTGIGK 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L DN+ ++EL E D I++E + L+ +K EV ++ E+LLSGEAD D YLEV Sbjct: 71 VERELTDNIDMIELGEAEGDEGIVKEAEEALKALKKEVARRELEALLSGEADRFDTYLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA+MLLRMY RWAEK FK E LE DGEEAGIKSAT+ I G NAYGWL Sbjct: 131 HAGAGGTESQDWASMLLRMYVRWAEKHGFKIEYLEESDGEEAGIKSATIQISGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DSN+RRHTSFSS+ ++PV+DDSI+I+I ESD R DT R+ GAGGQ Sbjct: 191 KTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDDSIKIDIKESDVRTDTMRSGGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVR+THIPTGV V CQ RSQHKN+AQAW+MLRA+LYE+EL+KREE A ++ Sbjct: 251 HVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLYEIELKKREEQAAADQA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +KTEIGWG QIRSYVLQPYQMVKDLRT ++ + + VLDGDLD+FM ATLA + Sbjct: 311 AKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDEFMAATLAQR 363 >gi|221198422|ref|ZP_03571468.1| peptide chain release factor 2, programmed frameshift [Burkholderia multivorans CGD2M] gi|221208901|ref|ZP_03581898.1| peptide chain release factor 2, programmed frameshift [Burkholderia multivorans CGD2] gi|221214768|ref|ZP_03587737.1| peptide chain release factor 2, programmed frameshift [Burkholderia multivorans CGD1] gi|221165307|gb|EED97784.1| peptide chain release factor 2, programmed frameshift [Burkholderia multivorans CGD1] gi|221171184|gb|EEE03634.1| peptide chain release factor 2, programmed frameshift [Burkholderia multivorans CGD2] gi|221182354|gb|EEE14755.1| peptide chain release factor 2, programmed frameshift [Burkholderia multivorans CGD2M] Length = 367 Score = 286 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 180/353 (50%), Positives = 251/353 (71%), Gaps = 1/353 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 + L + L G +D RL+ +N + EDP++W + A+ L RE++ L+ ++ + Sbjct: 14 LDLRTRAGELRGYLCYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLT 73 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 E+ + L D L L ELA EE D L + ++ +++ V +F + S AD N+ +++ Sbjct: 74 ELDNDLRDALDLFELAREEGDEDTLIASEEDAAKLEARVADIEFRRMFSNPADPNNCFID 133 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+ Sbjct: 134 IQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGY 193 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGG Sbjct: 194 LRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGG 253 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE EL+KR+ + E Sbjct: 254 QHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAELRKRQAEQDKLE 313 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 SSKT++GWG QIRSYVL VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 314 SSKTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTKAVLDGDLDDFISASLKQ 365 >gi|94309981|ref|YP_583191.1| peptide chain release factor 2 [Cupriavidus metallidurans CH34] gi|93353833|gb|ABF07922.1| peptide chain release factor RF-2 [Cupriavidus metallidurans CH34] Length = 357 Score = 286 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 174/346 (50%), Positives = 246/346 (71%), Gaps = 1/346 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD+D V RL +N EDP +W N A+ L +E++ L+ + + ++ D L Sbjct: 11 KIYGGIFDYDVKVNRLDEVNGLLEDPDVWNNPKRAQDLGKEKKALEGVVQVLGKLTDDLN 70 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L ELA EE D L+ ++ + V +F + SGE D +A++++ AGAGG Sbjct: 71 GTDELFELAREEGDDETLESIEADVSGFEALVADMEFRRMFSGEMDQANAFIDIQAGAGG 130 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DWA+MLLR Y ++ E++ FK E LE +G+ AGIKSAT+ ++G A+G+L+ E GV Sbjct: 131 TEACDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSATIKVEGEYAFGYLRTETGV 190 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS+ RHTSFSS++VYP VDDS E+E++ +D R+DTYRASGAGGQH+N TD Sbjct: 191 HRLVRKSPFDSSGGRHTSFSSVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTD 250 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VVQCQ +RSQH+N+A+A +ML+++LYE E++KR+ A+ E+ KT++G Sbjct: 251 SAVRITHMPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYEHEMRKRQAEADKLEAGKTDVG 310 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 311 WGHQIRSYVLD-QSRIKDLRTNVEMSNTQKVLDGDLDPFIEASLKQ 355 >gi|89094633|ref|ZP_01167570.1| peptide chain release factor 2, programmed frameshift [Oceanospirillum sp. MED92] gi|89081103|gb|EAR60338.1| peptide chain release factor 2, programmed frameshift [Oceanospirillum sp. MED92] Length = 364 Score = 286 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 172/351 (49%), Positives = 240/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L G D++ +RL ++ + EDP +W + A+ L +ER L+ + I ++ Sbjct: 13 IKERTEALRGFLDYETKQERLEEVSRELEDPAVWDDPENAQKLGKERSTLEAVVGTIDDL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D LL++A+EEDD + E ++ + ++ +F + +GEAD N+A+L++ Sbjct: 73 TAGVADTRDLLDMAVEEDDEDTVAEVESDVTAMLDRLQQLEFRRMFAGEADPNNAFLDIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA M+LRMY RW E + FKTE LE G+ AGIKSAT+ +G A+GWL+ Sbjct: 133 AGSGGTEAQDWAEMMLRMYLRWGEDKGFKTELLECSAGDVAGIKSATISFQGEYAFGWLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS++V P +DD+I+IEI+ +D R+D YRASGAGGQH Sbjct: 193 TETGVHRLVRKSPFDSGGRRHTSFSSVFVSPEIDDNIDIEINPADLRVDVYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH P+G+VVQ Q +RSQH+NK LRAKLYE+E+ KR E A E + Sbjct: 253 VNRTESAVRITHEPSGIVVQSQAQRSQHQNKDTCMKQLRAKLYEVEMLKRTEAAQEQEDN 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K +IGWG QIRSYVL +KDLRT ++ ++ VLDGDLD F++A+L Sbjct: 313 KADIGWGSQIRSYVLDDQ-RIKDLRTGVQSSNCDKVLDGDLDMFIEASLKA 362 >gi|120597725|ref|YP_962299.1| peptide chain release factor 2 [Shewanella sp. W3-18-1] gi|146294138|ref|YP_001184562.1| peptide chain release factor 2 [Shewanella putrefaciens CN-32] gi|120557818|gb|ABM23745.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella sp. W3-18-1] gi|145565828|gb|ABP76763.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella putrefaciens CN-32] Length = 352 Score = 286 bits (731), Expect = 4e-75, Method: Composition-based stats. Identities = 172/343 (50%), Positives = 232/343 (67%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+D +RL + + E +W A+ L +ER L+ + I ++ L D Sbjct: 8 LGGIFDYDAKHERLEEVTRELESSDVWNEPERAQALGKERASLEAVVKTIDDMDSGLEDV 67 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+EE+D ET+ L ++ + +F + SG D+++ YL++ +G+GGTE Sbjct: 68 EGLLELAVEEEDEDTFNETTKELDYLESRLADLEFRRMFSGPQDASNCYLDIQSGSGGTE 127 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANM+LRMY RW E F E +E+ DG+ AGIK AT+ G A+GWL+ E GVHR Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS+ RRHTSF S++VYP +DD I I+I+ +D RID YRASGAGGQHVN T+SA Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPADLRIDVYRASGAGGQHVNRTESA 247 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT VVQCQ +RSQHKNK A L+AKL+ELE+ K+ E +K++IGWG Sbjct: 248 VRITHLPTNTVVQCQNDRSQHKNKDSAMKQLKAKLFELEMHKQNAEKQAAEDAKSDIGWG 307 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT++E + VLDGDLD F++A+L Sbjct: 308 SQIRSYVLDD-SRIKDLRTSVETRNTQAVLDGDLDKFIEASLK 349 >gi|254261824|ref|ZP_04952878.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei 1710a] gi|254220513|gb|EET09897.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei 1710a] Length = 367 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 179/351 (50%), Positives = 250/351 (71%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L R+ L G +D +RL+ +N + EDP++W + A+ L RE++ L++ ++ + + Sbjct: 16 LRRRAGELRGYLCYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLESVVTTLTAL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L ELA EE D L T + +++ V +F + S AD N+ ++++ Sbjct: 76 DNDLRDAQALFELAHEEGDEETLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK+AT+ + G AYG+L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++L+E EL+KR+ + ESS Sbjct: 256 INKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESS 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KT++GWG QIRSYVL VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 316 KTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTKAVLDGDLDDFISASLKQ 365 >gi|158425248|ref|YP_001526540.1| peptide chain release factor 2 [Azorhizobium caulinodans ORS 571] gi|158332137|dbj|BAF89622.1| peptide chain release factor 2 [Azorhizobium caulinodans ORS 571] Length = 376 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 204/353 (57%), Positives = 268/353 (75%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +++ ++ L + D + +RL+ LN EDP LW + A+ +M+ER L++A++ I Sbjct: 11 EINASVDLLRQHLNVDRSRRRLAELNAIAEDPTLWDDPERAQKIMQERTSLEDALNAIDR 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I L DN+ L+EL E D S++ E + L +K E+ ++ ++LLSGEADSND YLEV Sbjct: 71 ITRDLTDNIELIELGEAEGDESVITEAAGALDALKAELARRELDALLSGEADSNDTYLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGT+SQDWA MLLRMY RW E+ FK E ++ GE+AG+KSAT+++KG NAYGWL Sbjct: 131 HAGAGGTDSQDWAEMLLRMYRRWCERHGFKVELVDESAGEQAGLKSATIIVKGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DSN+RR TSF+SI VYPV+DD I +EI+ESD R+DT R+ GAGGQ Sbjct: 191 KTEAGVHRLVRISPFDSNARRQTSFASIDVYPVIDDRIVVEINESDVRVDTMRSGGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVR+THIPTG+ V Q +RSQHKN+A AWNMLRAKL+E+EL+KREE A ++ Sbjct: 251 HVNKTESAVRLTHIPTGIAVVSQGDRSQHKNRATAWNMLRAKLFEMELKKREEAAAAEQA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 ++T+IGWG QIRSYVLQPYQ+VKDLRT + +P +VLDGDLD FM+A LA + Sbjct: 311 ARTDIGWGHQIRSYVLQPYQLVKDLRTGVTSGTPQEVLDGDLDPFMEAALAQR 363 >gi|24638154|sp|Q8ZHK4|RF2_YERPE RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|115346673|emb|CAL19556.1| peptide chain release factor 2 [Yersinia pestis CO92] Length = 366 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 186/352 (52%), Positives = 240/352 (68%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 LS + L G D+D +RL +N + E P +W A+ L +ER L+ ++ I + Sbjct: 14 LSDRTAVLRGYLCDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSTLEEIVTTIDQ 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D LLELA+E DD ET L+ + ++ +F + SGE D + YL++ Sbjct: 74 LEQGLEDVSGLLELAVEADDEETFNETIAELEVLDGKLGQLEFRRMFSGEYDRANCYLDL 133 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E DG+ AG+KSAT+ I G A+GWL Sbjct: 134 QAGSGGTEAQDWASMLLRMYLRWAESRGFKTEIIEESDGDVAGLKSATVKIIGEYAFGWL 193 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQ Sbjct: 194 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQ 253 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ + E Sbjct: 254 HVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLED 313 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 NKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 364 >gi|284048024|ref|YP_003398363.1| peptide chain release factor 2 [Acidaminococcus fermentans DSM 20731] gi|283952245|gb|ADB47048.1| peptide chain release factor 2 [Acidaminococcus fermentans DSM 20731] Length = 366 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 168/354 (47%), Positives = 232/354 (65%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L +L L G +R+ L + P W + +A+ + +E +L + Sbjct: 12 QLKDKLEELKGGLKIAQKEERIEDLEHQMAAPGFWDDPDKAQTVAQEANNLKTEVETYHG 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + +L D L E+A+EE D S+ E + ++ + + + LLS + D+N+A L + Sbjct: 72 LAAKLDDVETLWEMAMEEKDDSLQGEIEEEVENARKTLADLELGMLLSDQYDANNAILTL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTE+QDW NMLLRMYTR+AE++ F E L++ GEEAGIKSATL ++G NAYG+L Sbjct: 132 HAGAGGTEAQDWTNMLLRMYTRYAEQKGFTVELLDVLPGEEAGIKSATLTVQGHNAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+D+N+RRHTSF+++ V P +D+++E+ ++ D R+D YRASGAGGQ Sbjct: 192 KSEKGVHRLVRISPFDANARRHTSFAAVDVMPELDETVEVNLNMDDVRVDYYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T SAVR+THIPTG+VVQCQ ERSQ +NK + +LRAKLYE E +++ + Sbjct: 252 HVNKTSSAVRMTHIPTGIVVQCQNERSQLQNKERCLALLRAKLYEYEKAIQDKKISELAG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 I WG QIRSYV QPY MVKD RT E + V+DGDLD F++A L K Sbjct: 312 DYQAIEWGSQIRSYVFQPYTMVKDHRTGAETGNIQAVMDGDLDPFVEAYLRSLK 365 >gi|294084599|ref|YP_003551357.1| protein chain release factor B [Candidatus Puniceispirillum marinum IMCC1322] gi|292664172|gb|ADE39273.1| Protein chain release factor B [Candidatus Puniceispirillum marinum IMCC1322] Length = 369 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 210/352 (59%), Positives = 267/352 (75%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +S L L +++ AV RL+ L +T P W + A+ +MRE+ L+ I+ IK++ Sbjct: 12 ISSTLELLRKHVNFEVAVARLNDLEAQTTMPDFWNDQAVAQDVMREKNRLERQINLIKDM 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 Q + D + L+EL + E D ++ E L ++ E + +Q ESLLSGEAD+ND +LE+H Sbjct: 72 QAEMDDCVALIELGIAEGDDDVVAEAEAVLTKLVTEADKRQLESLLSGEADANDCFLEIH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA ML+RMY RW E+R +K +E GEEAGIKS T+ I G NAYGWLK Sbjct: 132 AGAGGTEAQDWAQMLVRMYGRWCEQRGYKVHLIEESAGEEAGIKSVTMRIDGENAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS++RRHTSF+S WVYPVVDD+IEIE+ + D RIDTYRASGAGGQH Sbjct: 192 TESGVHRLVRISPYDSSARRHTSFASAWVYPVVDDNIEIEVEDKDLRIDTYRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSA+RITH+PT +VVQCQ +RSQH+N+A A+NML+A+LYELELQKREE A+ +S Sbjct: 252 VNKTDSAIRITHLPTNIVVQCQNDRSQHRNRATAFNMLKARLYELELQKREEAASDAAAS 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT+IGWG QIRSYVL PYQMVKDLRTN+EK + VLDGDLD F++A+LA + Sbjct: 312 KTDIGWGNQIRSYVLHPYQMVKDLRTNVEKGNAQGVLDGDLDSFIEASLAAR 363 >gi|224824516|ref|ZP_03697623.1| peptide chain release factor 2 [Lutiella nitroferrum 2002] gi|224603009|gb|EEG09185.1| peptide chain release factor 2 [Lutiella nitroferrum 2002] Length = 349 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 181/344 (52%), Positives = 239/344 (69%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D RL + TEDP +W + A+ L RER+ L++ + I I + D+ Sbjct: 5 FGGIFDYDGKCDRLEEVVRLTEDPDVWNDPKRAQDLGRERKQLEDVVLVIDRISGAVNDS 64 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L ++A EE+D + D+L + ++ +F + D N+ +L++ AGAGGTE Sbjct: 65 RDLFDMAREENDADTILAVQDDLAEAEAKLAQLEFRRMFHDPMDPNNCFLDIQAGAGGTE 124 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA MLLRMYTR+AE++ F+ E LE +GE AGI SATL I G AYG L+ E GVHR Sbjct: 125 AQDWAGMLLRMYTRYAERKGFRVEILEESEGEVAGITSATLKISGEYAYGLLRTEVGVHR 184 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR+SP+DSN+RRHTSFSS++VYP VDDS IEI+ +D R+DTYRASGAGGQH+N TDSA Sbjct: 185 LVRVSPFDSNARRHTSFSSVFVYPEVDDSFVIEINPADLRVDTYRASGAGGQHINKTDSA 244 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH PTG+VVQCQ +RSQH+N+ +A MLRAKLYELEL+KR E E +KT++GWG Sbjct: 245 VRITHNPTGIVVQCQNDRSQHRNRDEAMQMLRAKLYELELKKRNEAKQALEDTKTDVGWG 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYV +KDLRT+ E + V+DGDLD F++ +L Sbjct: 305 HQIRSYVFD-QSRIKDLRTSYEVGNIKSVMDGDLDGFIEESLKQ 347 >gi|260582141|ref|ZP_05849935.1| peptide chain release factor 2 [Haemophilus influenzae NT127] gi|260094773|gb|EEW78667.1| peptide chain release factor 2 [Haemophilus influenzae NT127] Length = 351 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 184/347 (53%), Positives = 246/347 (70%), Gaps = 1/347 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L C GG+FD+D V+RL +N + E P +W +A+ L +ER L+ ++ IK ++ L Sbjct: 4 LRCFGGIFDFDAKVERLEEVNAELEQPDVWNAPDKAQTLGKERVSLEQVVNTIKNLEQGL 63 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LLELA+E +D E L ++ ++E +F + SGE D+ D Y+++ AG+G Sbjct: 64 EDVDGLLELAIEAEDEDTFHEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVDLQAGSG 123 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW MLLRMY RW E + FKTE +E+ DG+ AG+KSAT+ + G A+GWL+ E G Sbjct: 124 GTEAQDWTEMLLRMYLRWTESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETG 183 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T Sbjct: 184 IHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKT 243 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITH+P+G+VVQCQ +RSQHKNK QA L+AKLYELELQK+ E +K++I Sbjct: 244 ESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDI 303 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 GWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 304 GWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 349 >gi|192291110|ref|YP_001991715.1| hypothetical protein Rpal_2731 [Rhodopseudomonas palustris TIE-1] gi|192284859|gb|ACF01240.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1] Length = 376 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 215/353 (60%), Positives = 274/353 (77%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + + L D D + RL+ LN EDP LW + +A+ LM+ER L+++++ I + Sbjct: 11 EIKQSVGLLRRHLDVDQSTVRLAELNKLAEDPDLWNDPQKAQKLMQERTSLEDSLTGIGK 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L DN+ ++EL E D I++E D L+ +K EV ++ E+LLSGEAD D YLEV Sbjct: 71 VERELTDNIEMIELGEAEGDEGIVKEAEDALKALKKEVARRELEALLSGEADRFDTYLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA+MLLRMY RWAEK FK E LE +GEEAGIKSAT+ I G NAYGWL Sbjct: 131 HAGAGGTESQDWASMLLRMYVRWAEKHGFKIEYLEESEGEEAGIKSATIQISGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DSN+RRHTSFSS+ ++PV+D+SI+I+I+ESD R+DT R+ GAGGQ Sbjct: 191 KTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDNSIKIDIAESDVRVDTMRSGGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVR+THIPTGV V CQ RSQHKN+AQAW+MLRA+LYE+EL+KREE A ++ Sbjct: 251 HVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLYEIELKKREEQAAADQA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +KTEIGWG QIRSYVLQPYQMVKDLRT ++ + + VLDGDLD+FM ATLA + Sbjct: 311 AKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDEFMAATLAQR 363 >gi|172087665|ref|YP_203835.2| peptide chain release factor RF-2 [Vibrio fischeri ES114] gi|229576704|sp|Q5E7P9|RF2_VIBF1 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|171902260|gb|AAW84947.2| peptide chain release factor RF-2 [Vibrio fischeri ES114] Length = 365 Score = 285 bits (730), Expect = 5e-75, Method: Composition-based stats. Identities = 178/350 (50%), Positives = 241/350 (68%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +S + N L G D+D +RL +N + E P +W A+ L +ER L+ + I + Sbjct: 14 VSERTNILRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERASLEAVVETIDLL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D LLELA+EE+D E L ++ ++ +F + SG+ D++D Y+++ Sbjct: 74 DQGVEDVDGLLELAVEEEDQETFDEIEPELAELEAKLAKLEFRRMFSGDHDASDCYIDLQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +G+GGTE+QDW +M+LRMY RWAE + FK E +E+ +GE AG+K AT+ I G AYGWL+ Sbjct: 134 SGSGGTEAQDWTSMMLRMYLRWAEAKGFKVEVIEVSEGEVAGLKGATVRIAGEYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I+I+I+ SD RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNIQIDINPSDLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT+SAVRITH+PT +VVQCQ +RSQHKNK QA LRAKL+E ELQK+ E + Sbjct: 254 VNTTESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLRAKLFEYELQKQNAEKQANEDA 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K++IGWG QIRSYVL +KDLRT IE + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDKFIEASLK 362 >gi|296134253|ref|YP_003641500.1| hypothetical protein TherJR_2767 [Thermincola sp. JR] gi|296032831|gb|ADG83599.1| hypothetical protein TherJR_2767 [Thermincola potens JR] Length = 371 Score = 285 bits (730), Expect = 6e-75, Method: Composition-based stats. Identities = 170/355 (47%), Positives = 240/355 (67%), Gaps = 1/355 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 ++L+ +L L D V+ ++ L KT + W N +EA+ +MRE L + I Sbjct: 10 IELAERLEELRVSLDIAGKVRAVNALEEKTAEQGFWDNPVEAQKVMREINDLKDTIGLYN 69 Query: 61 EIQDRLCDNLILLEL-ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 ++ + D L EL ++D I +E + +++ ++ VE + LL + D +A + Sbjct: 70 TLKRQYDDVYTLWELGMEDDDPDEIEKEVARDIRHLRHNVEQAELTLLLGDKYDKGNAII 129 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 +HAGAGGTE+QDW MLLRMYTRWAE++ +K + L++ G+EAGIKSA++ I+GP AYG Sbjct: 130 SLHAGAGGTEAQDWVQMLLRMYTRWAEEKGYKIDTLDLLPGDEAGIKSASISIEGPYAYG 189 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 +LK E+GVHRLVRISP+D++ RRHTSF+S+ V P VDD EI I +D RIDT+R+ GAG Sbjct: 190 YLKSEKGVHRLVRISPFDASGRRHTSFASVDVLPEVDDETEIVIDPADLRIDTFRSGGAG 249 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQHVN TDSAVRITHIPTG+VVQCQ ERSQH N+ +A +L+A+L +LE++K+EE N Sbjct: 250 GQHVNKTDSAVRITHIPTGIVVQCQNERSQHSNRLKAMKLLQARLLDLEIKKKEEELNKL 309 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EI WG QIRSYV PY +VKD RT +E + V+DG++D+F+ A L + Sbjct: 310 RGEQQEIAWGSQIRSYVFHPYSLVKDHRTGVETGNVQAVMDGEIDEFIAAYLKSR 364 >gi|269850236|gb|ACZ49981.1| peptide chain release factor 2, programmed frameshift [Bacillus anthracis str. Ames] Length = 365 Score = 285 bits (729), Expect = 6e-75, Method: Composition-based stats. Identities = 170/353 (48%), Positives = 227/353 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L G ++++ L K W + A+ ++ E L + + ++ Sbjct: 12 KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + I EL EE D + +E ++ + E+ + + LLS D N A LE+ Sbjct: 72 LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNKAILEL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAEKR FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 132 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +D +EIE+ D +IDTYRASGAGGQ Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PT VV CQ ERSQ KN+ A ML+AKLY+ +L++++ + Sbjct: 252 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY +VKD RTN E + V+DG++D F+ A L + Sbjct: 312 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 364 >gi|217962667|ref|YP_002341241.1| peptide chain release factor 2 [Bacillus cereus AH187] Length = 380 Score = 285 bits (729), Expect = 7e-75, Method: Composition-based stats. Identities = 171/353 (48%), Positives = 228/353 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L G ++++ L K W + A+ ++ E L + + ++ Sbjct: 27 KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGSFRQ 86 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + I EL EE D + +E ++ + E+ + + LLS D N+A LE+ Sbjct: 87 LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAEKR FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +D +EIEI D +IDTYRASGAGGQ Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEIRTEDLKIDTYRASGAGGQ 266 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PT VV CQ ERSQ KN+ A ML+AKLY+ +L++++ + Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY +VKD RTN E + V+DG++D F+ A L + Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379 >gi|307822369|ref|ZP_07652601.1| peptide chain release factor 2 [Methylobacter tundripaludum SV96] gi|307736935|gb|EFO07780.1| peptide chain release factor 2 [Methylobacter tundripaludum SV96] Length = 347 Score = 285 bits (729), Expect = 7e-75, Method: Composition-based stats. Identities = 175/343 (51%), Positives = 248/343 (72%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+D +RL + + E+P +W N EA+ L +ER L+ ++ I +++ L D Sbjct: 3 LGGIFDFDVKSERLVEVLRELENPKIWDNPEEAQALGKERGQLEVIVNTINDLERGLSDA 62 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LL +A+EEDD ++ D+L+ + V +F + SG+ D+N+A+L++ +G+GGTE Sbjct: 63 EELLLMAVEEDDEETVETVVDDLEHFEKRVADLEFRRMFSGQMDANNAFLDIQSGSGGTE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA+++ RMY RW E++ FKTE +E G+ AGIKSAT+ +G A+GWL+ E GVHR Sbjct: 123 AQDWASIIERMYLRWGEQKGFKTELIEESQGDVAGIKSATIKFEGEYAFGWLRTETGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS +RRHTSF+S++V P +DD I+I+I+ +D R+D YRASGAGGQH+N T+SA Sbjct: 183 LVRKSPFDSGNRRHTSFASVFVSPEIDDDIDIDINPADIRVDVYRASGAGGQHINKTESA 242 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+TH PTG+VVQCQ +RSQHKN+ A L+AKLYELE++KR E A E +K++IGWG Sbjct: 243 VRMTHNPTGIVVQCQSDRSQHKNRDTAMKQLKAKLYELEMRKRSETAQALEDTKSDIGWG 302 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRTN+E + VLDGDLD F++A+L Sbjct: 303 SQIRSYVLD-QSRIKDLRTNVETGNTQAVLDGDLDQFIEASLK 344 >gi|73914009|sp|Q9CP66|RF2_PASMU RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 365 Score = 285 bits (729), Expect = 7e-75, Method: Composition-based stats. Identities = 179/351 (50%), Positives = 244/351 (69%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + L G D+D V+RL +N + E P +W +A+ L +ER L+ ++ I + Sbjct: 14 LTERTQVLRGYLDFDAKVERLEEVNAELEQPDVWNEPEKAQALGKERVALEGVVNTIHTL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA+E +D + E L+ ++ ++ +F + SG+ D+ D Y+++ Sbjct: 74 DQGLEDVEGLLELAIEAEDEATFHEAVAELEELEQQLAKLEFRRMFSGQHDAADCYVDLQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AGIKSAT+ + G A+GWL+ Sbjct: 134 AGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGIKSATIKVSGEYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+I+I+ +D RID YRASGAGGQH Sbjct: 194 TETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIDINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIP+G+VVQCQ +RSQHKNK Q L+AKLYE+ELQK+ E + Sbjct: 254 VNKTESAVRITHIPSGIVVQCQNDRSQHKNKDQCMKQLKAKLYEMELQKKNADKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 363 >gi|297618035|ref|YP_003703194.1| hypothetical protein Slip_1875 [Syntrophothermus lipocalidus DSM 12680] gi|297145872|gb|ADI02629.1| hypothetical protein Slip_1875 [Syntrophothermus lipocalidus DSM 12680] Length = 371 Score = 285 bits (729), Expect = 8e-75, Method: Composition-based stats. Identities = 164/353 (46%), Positives = 230/353 (65%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ ++L +GG D + R+ L KT P W + EA+ +++E L + + Sbjct: 12 EIKKRLEEIGGSLDVEGLKHRIKKLEDKTCQPGFWDDNQEAQKVVKEMSGLKERVDSYES 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D LLELA E+D + +E + L R+ + + GE D ++A + + Sbjct: 72 LVREIEDISALLELAEAEEDEELYREAAAELARLNRRFREYELSIMFKGEHDDSNAIVSL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGT++QDW MLLRMYTRWAE ++ + ++ GEEAGIKS TLLIKG AYG + Sbjct: 132 HAGAGGTDAQDWVEMLLRMYTRWAEDNGYEVDIMDYLPGEEAGIKSVTLLIKGKYAYGKM 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRL+R+SP+D++ RRHTSF+ + V P + D +E+ IS D RIDT+RA GAGGQ Sbjct: 192 RAEAGVHRLIRVSPFDASGRRHTSFALVSVLPEIQDDVEVTISSDDLRIDTFRAGGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVRITH+P+G+VVQCQ ERSQ+ NK A +LRAKLYEL+ +++EE + Sbjct: 252 HVNKTDSAVRITHLPSGIVVQCQNERSQYANKLAAMKILRAKLYELKQREQEESLQKLKG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 EI WG QIR+YVL P+ +VKD RT +E + + VLDGD++DF+ A L K Sbjct: 312 EYKEIAWGNQIRTYVLNPFSLVKDHRTGLEVGNVNAVLDGDINDFITAYLGQK 364 >gi|218906362|ref|YP_002454196.1| peptide chain release factor 2, programmed frameshift [Bacillus cereus AH820] gi|218540032|gb|ACK92430.1| peptide chain release factor 2, programmed frameshift [Bacillus cereus AH820] Length = 380 Score = 285 bits (728), Expect = 8e-75, Method: Composition-based stats. Identities = 170/353 (48%), Positives = 228/353 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L G ++++ L K W + A+ ++ E L + + ++ Sbjct: 27 KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 86 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + I EL EE D + +E ++ + E+ + + LLS D N+A LE+ Sbjct: 87 LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAEKR FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +D +EIE+ D +IDTYRASGAGGQ Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 266 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PT VV CQ ERSQ KN+ A ML+AKLY+ +L++++ + Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY +VKD RTN E + V+DG++D F+ A L + Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379 >gi|258517064|ref|YP_003193286.1| peptide chain release factor 2 [Desulfotomaculum acetoxidans DSM 771] gi|257780769|gb|ACV64663.1| bacterial peptide chain release factor 2 (bRF- 2) [Desulfotomaculum acetoxidans DSM 771] Length = 366 Score = 285 bits (728), Expect = 8e-75, Method: Composition-based stats. Identities = 172/353 (48%), Positives = 234/353 (66%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LS ++ L D + L+ P W + +A+ + R++ L +++S E Sbjct: 11 ELSGRVADLRVSLDIAGKESEIEKLDKLMMAPGFWDDQAQAQKISRQQAVLKDSVSLYGE 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D +L ELA EEDD L+ET+ +L++++L V + + LLSGE D +A + + Sbjct: 71 LRQSLEDLEVLAELAQEEDDDIALRETAKDLKQLELRVSELELDVLLSGEYDRGNAIISL 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTE+QDW MLLRM+TRWAE +++ L++ G+EAGIKS T+ I GPNA+G+L Sbjct: 131 HAGAGGTEAQDWVEMLLRMFTRWAEDHRYRVIVLDMLSGDEAGIKSVTVEIVGPNAFGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+D+ RRHTSF+S+ V P VD+ ++IEI D +IDT+RA GAGGQ Sbjct: 191 KSEKGVHRLVRISPFDTAGRRHTSFASVEVLPEVDEDVDIEIKTEDLKIDTFRAGGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVRITH+PTG+VV CQ ERSQ N+ A +L+AKL ELELQK+E Sbjct: 251 HVNKTDSAVRITHLPTGIVVSCQNERSQLSNRNSAMKLLKAKLAELELQKKEAEMASLRG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 EI WG QIRSYV PY +VKD RT E + V++G+LD FM A L + Sbjct: 311 DHQEIAWGSQIRSYVFHPYSLVKDHRTGAETGNIEAVMNGELDKFMAAFLLWQ 363 >gi|291613970|ref|YP_003524127.1| hypothetical protein Slit_1503 [Sideroxydans lithotrophicus ES-1] gi|291584082|gb|ADE11740.1| conserved hypothetical protein [Sideroxydans lithotrophicus ES-1] Length = 367 Score = 285 bits (728), Expect = 9e-75, Method: Composition-based stats. Identities = 177/351 (50%), Positives = 249/351 (70%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + N L D+D+ +RL+ +N EDP +W + A+ L RER+ L++ + + I Sbjct: 16 LRNRSNELRRFLDFDSKQERLAEVNQLAEDPAIWNDAKRAQELGRERKSLEDVVLGLIRI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D L E+A E+D L + ++Q I+ V +F + S AD N+ ++++ Sbjct: 76 SQNLDDAAELFEMAQAENDDDSLNSIAADVQDIETRVAALEFRRMFSNPADPNNCFIDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y ++ E++ FK E LE DG+ AGI+SA+L ++G AYG L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLKYCERKGFKVEVLEQTDGDVAGIRSASLKVEGEYAYGHLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ RHTSF+S++V P VDDSIE++I+ +D RIDT+RASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASLFVSPEVDDSIEVDINPADLRIDTFRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSA+RITH PTG+VVQCQ +RSQH+NKA+A +ML+++LYELEL+KR+ A+ E+S Sbjct: 256 INKTDSAIRITHQPTGIVVQCQNDRSQHRNKAEAMSMLKSRLYELELRKRQSEADKLEAS 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 316 KTDVGWGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDPFIEASLKQ 365 >gi|15642771|ref|NP_230312.1| peptide chain release factor 2 [Vibrio cholerae O1 biovar El Tor str. N16961] Length = 365 Score = 285 bits (728), Expect = 9e-75, Method: Composition-based stats. Identities = 183/350 (52%), Positives = 243/350 (69%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +S + N L G D+D +RL +N + E P +W A+ L +ER L+ + I ++ Sbjct: 14 VSERTNILRGYLDYDAKKERLEEVNAELEQPDVWTQPERAQALGKERSALEAVVDTIDQL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D LLELA+E +D E L ++ ++E +F + SG+ DS+D YL++ Sbjct: 74 DRGVDDVEGLLELAIEAEDQETFDEIGPELDELEAKLEQLEFRRMFSGDHDSSDCYLDLQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSF+S ++YP VD++I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT+SAVRITH+PT VVQCQ +RSQHKNK QA LRAKL+ELELQK+ E + Sbjct: 254 VNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDA 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K++IGWG QIRSYVL +KDLRT IE + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDKFIEASLK 362 >gi|301156116|emb|CBW15587.1| peptide chain release factor RF-2 [Haemophilus parainfluenzae T3T1] Length = 347 Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 182/345 (52%), Positives = 244/345 (70%), Gaps = 1/345 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 C GG+FD+D V+RL +N + E P +W +A+ L +ER L+ + IK ++ L D Sbjct: 2 CFGGIFDFDAKVERLEEVNAELEQPDVWNEPEKAQALGKERVSLEQVVDTIKNLEQGLED 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 LLELA+E +D E L ++ ++ +F + SGE D+ D Y+++ AG+GGT Sbjct: 62 VEGLLELAVEAEDEETFNEAVAELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G A+GWL+ E G+H Sbjct: 122 EAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIRVSGEYAFGWLRTETGIH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+S Sbjct: 182 RLVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTES 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+P+G+VVQCQ +RSQHKNK QA L+AKLYELELQK+ E +K++IGW Sbjct: 242 AVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGW 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 G QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 302 GSQIRSYVLDD-ARIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 345 >gi|283777745|ref|ZP_06344221.1| peptide chain release factor 2, programmed frameshift [Bacillus cereus NVH0597-99] gi|283645392|gb|EFC27417.1| peptide chain release factor 2, programmed frameshift [Bacillus cereus NVH0597-99] Length = 380 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 171/353 (48%), Positives = 228/353 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L G ++++ L K W + A+ ++ E L + + ++ Sbjct: 27 KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 86 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + I EL EE D + +E ++ + E+ + + LLS D N+A LE+ Sbjct: 87 LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAEKR FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +D +EIEI D +IDTYRASGAGGQ Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEIRTEDLKIDTYRASGAGGQ 266 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PT VV CQ ERSQ KN+ A ML+AKLY+ +L++++ + Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY +VKD RTN E + V+DG++D F+ A L + Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379 >gi|77359475|ref|YP_339050.1| peptide chain release factor 2 [Pseudoalteromonas haloplanktis TAC125] gi|123589557|sp|Q3ILD8|RF2_PSEHT RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|76874386|emb|CAI85607.1| peptide chain release factor 2 (RF-2) [Pseudoalteromonas haloplanktis TAC125] Length = 365 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 180/351 (51%), Positives = 234/351 (66%), Gaps = 1/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L G D+ +RL +N + ED +W A+ L RE+ L+ + I Sbjct: 13 EIRERTELLRGYLDYALKQERLEEVNAELEDSAVWNEPERAQALGREKSALEAVVETIDT 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D LLELA+E +D E L + ++E +F + SG DSNDAYL++ Sbjct: 73 LVTGTDDVEGLLELAVEAEDQETFDEAQSELADLNEQLEALEFRRMFSGPHDSNDAYLDL 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +G+GGTE+QDW N+LLRMY RW E + FK E +E G+ AGIK AT+ G AYGWL Sbjct: 133 QSGSGGTEAQDWCNILLRMYLRWGEAKGFKVELVEATGGDVAGIKGATVRFVGEYAYGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS+ RRHTSF+S +VYP VDD+IEI+++ SD RID YRASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSSGRRHTSFASAFVYPEVDDNIEIDMNPSDLRIDVYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTT+SAVRITH+PT VVQCQ ERSQHKNKAQA L+AKL+ELELQ++ E Sbjct: 253 HVNTTESAVRITHVPTNTVVQCQNERSQHKNKAQAMKQLKAKLFELELQQQNAEKQTQED 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 SK++IGWG QIRSYVL +KDLRT +E + VLDG+LD F++A+L Sbjct: 313 SKSDIGWGSQIRSYVLDD-ARIKDLRTGVESRNTQSVLDGNLDKFIEASLK 362 >gi|194365600|ref|YP_002028210.1| peptide chain release factor 2 [Stenotrophomonas maltophilia R551-3] gi|238693429|sp|B4SHV0|RF2_STRM5 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|194348404|gb|ACF51527.1| conserved hypothetical protein [Stenotrophomonas maltophilia R551-3] Length = 374 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 179/351 (50%), Positives = 240/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ ++ L G D+D +RL + + E P +W N A+ L RER L+ + I + Sbjct: 14 LTDRVLSLRGYLDYDAKKERLEEVTRELESPDVWNNAEYAQNLGRERSSLEKTVGGIASV 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 D L D LLELA E D +L + + VE +F+ + SGE D+ A++++ Sbjct: 74 LDGLADATELLELAESEQDEDTALAVVADLDKHQAHVEKLEFQRMFSGEMDNAAAFVDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA +LLRMY RW E R +KTE +E+ G+ AGIKSATL ++G AYGWLK Sbjct: 134 AGAGGTEAQDWAEILLRMYLRWCESRGWKTELMEVSGGDVAGIKSATLRVEGDYAYGWLK 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS++RRHTSF+S++V P +DD+I+I I+ +D R D YR+SGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSDNRRHTSFTSVFVSPEIDDNIDITINPADLRTDVYRSSGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT +VV CQ RSQH+N+ A ML AKLYELE+QKR + E++ Sbjct: 254 VNKTESAVRITHIPTNIVVACQTGRSQHQNRDNAMKMLAAKLYELEIQKRNAEKDAVEAT 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIR+YVL +KDLRT IE++ VLDGDLD+F++A+L Sbjct: 314 KSDIGWGSQIRNYVLD-QSRIKDLRTGIERSDTQKVLDGDLDEFVEASLKA 363 >gi|157162351|ref|YP_001459669.1| peptide chain release factor 2 [Escherichia coli HS] gi|166977373|sp|A8A432|RF2_ECOHS RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|157068031|gb|ABV07286.1| peptide chain release factor 2 [Escherichia coli HS] Length = 365 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 184/351 (52%), Positives = 237/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G +D +RL +N + E P +W A+ L +ER L+ + + ++ Sbjct: 14 LTERSDVLRGYLCYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 74 KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363 >gi|227817946|ref|YP_002817955.1| peptide chain release factor 2, programmed frameshift [Bacillus anthracis str. CDC 684] gi|229604792|ref|YP_002869406.1| peptide chain release factor 2, programmed [Bacillus anthracis str. A0248] gi|227003828|gb|ACP13571.1| peptide chain release factor 2, programmed frameshift [Bacillus anthracis str. CDC 684] gi|229269200|gb|ACQ50837.1| peptide chain release factor 2, programmed [Bacillus anthracis str. A0248] Length = 380 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 170/353 (48%), Positives = 227/353 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L G ++++ L K W + A+ ++ E L + + ++ Sbjct: 27 KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 86 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + I EL EE D + +E ++ + E+ + + LLS D N A LE+ Sbjct: 87 LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNKAILEL 146 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAEKR FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +D +EIE+ D +IDTYRASGAGGQ Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 266 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PT VV CQ ERSQ KN+ A ML+AKLY+ +L++++ + Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY +VKD RTN E + V+DG++D F+ A L + Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379 >gi|56478734|ref|YP_160323.1| peptide chain release factor 2 [Aromatoleum aromaticum EbN1] gi|81598559|sp|Q5NZU2|RF2_AZOSE RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|56314777|emb|CAI09422.1| peptide chain release factor 2 (RF-2),gene containing programmed frameshift site [Aromatoleum aromaticum EbN1] Length = 367 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 179/351 (50%), Positives = 240/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + L D+D +L + EDP +W N +A+ L +E++ L++ + +++I Sbjct: 16 LRARGRELRRYLDYDEKSSKLEEVTRALEDPAVWNNAEKAQELGKEKRQLEDVVHNLRDI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L +LA EDD L ++ ++ +V +F + S D N ++E+ Sbjct: 76 ESLSSDLKDLFDLAEAEDDEDTLAAVEADIGELQAKVHALEFRRMFSNPMDPNPCFIEIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA ML RMY R+ E++ F E +E +GE AGIK AT+ + G AYG+L+ Sbjct: 136 AGAGGTEAQDWAGMLERMYLRYCERKGFNVELMEESEGEVAGIKGATIKVSGDYAYGFLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DSN+RRHTSFSS++VYP VDDSI+I+I+ +D RIDTYRASGAGGQH Sbjct: 196 TETGIHRLVRKSPFDSNARRHTSFSSVFVYPEVDDSIQIDINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTGVVVQCQ +RSQHKNKA+A +ML+A+LYELEL+KR+ E S Sbjct: 256 INKTDSAVRITHEPTGVVVQCQNDRSQHKNKAEAMSMLKARLYELELRKRQSEQQKLEDS 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRTN E + VLDGDLDDF+ A+L Sbjct: 316 KSDIGWGHQIRSYVLD-QSRIKDLRTNFEVGNTQAVLDGDLDDFIAASLKQ 365 >gi|267847202|gb|ACJ79637.2| peptide chain release factor 2, programmed frameshift [Bacillus cereus AH187] Length = 380 Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats. Identities = 171/353 (48%), Positives = 228/353 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++++L G ++++ L K W + A+ ++ E L + + ++ Sbjct: 27 KMAKRLAAFRGSLYLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGSFRQ 86 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + I EL EE D + +E ++ + E+ + + LLS D N+A LE+ Sbjct: 87 LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAEKR FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS+ RRHTSF S V P +D +EIEI D +IDTYRASGAGGQ Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEIRTEDLKIDTYRASGAGGQ 266 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PT VV CQ ERSQ KN+ A ML+AKLY+ +L++++ + Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY +VKD RTN E + V+DG++D F+ A L + Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379 >gi|304396712|ref|ZP_07378592.1| peptide chain release factor 2 [Pantoea sp. aB] gi|304355508|gb|EFM19875.1| peptide chain release factor 2 [Pantoea sp. aB] Length = 351 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 179/344 (52%), Positives = 237/344 (68%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D +RL +N + E P++W A+ L +ER L+ + + ++ L D Sbjct: 7 FGGIFDYDAKKERLEEVNAELEQPYVWNEPERAQALGKERSSLEAIVQTLDQMSQGLEDV 66 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+E +D E L ++ ++ +F + SGE DS D Y+++ AG+GGTE Sbjct: 67 QGLLELAVEAEDEETFDEAVAELDVLEGKLGELEFRRMFSGEYDSADCYIDLQAGSGGTE 126 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA+ML+RMY RWAE + FKTE +E +GE AGIKS T+ + G A+GWL+ E GVHR Sbjct: 127 AQDWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAFGWLRTETGVHR 186 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS RRHTSFSS ++YP VDD I+I+I+ +D RID YRASGAGGQHVN T+SA Sbjct: 187 LVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESA 246 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG Sbjct: 247 VRITHIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQALEDNKSDIGWG 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 307 SQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDRFIEASLKA 349 >gi|262373739|ref|ZP_06067017.1| peptide chain release factor 2 [Acinetobacter junii SH205] gi|262311492|gb|EEY92578.1| peptide chain release factor 2 [Acinetobacter junii SH205] Length = 351 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 177/346 (51%), Positives = 240/346 (69%), Gaps = 1/346 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD+D +RL + + EDP +W + A+ + +E+ L+N + + ++L Sbjct: 5 KHYGGIFDYDLKAERLEEVLRELEDPAIWNDQSRAQAIAKEKGSLENTLGVFDRLAEQLD 64 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D +L+LA+E DD S+L++ L + + +F + S D N +LE+ +G+GG Sbjct: 65 DAKAMLDLAVEADDESLLEDVQAELDSAEQALGNLEFRRMFSNPMDPNPCFLEIQSGSGG 124 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDWA+MLLRMY RW E+ FK E +E+ DG+ AGIKSAT+ + G AYGWL+ E GV Sbjct: 125 TEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAGIKSATIRVDGEFAYGWLRTESGV 184 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DSN+ RHTSFS+++V P +DD+IEI+I+ SD R DTYRASGAGGQH+N TD Sbjct: 185 HRLVRKSPFDSNNNRHTSFSAVFVSPEIDDNIEIDINPSDVRTDTYRASGAGGQHINKTD 244 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+VV CQ +RSQH N+ AW LRAKLYELE+ KR E A E SK++IG Sbjct: 245 SAVRLTHAPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMSKRNEAAQALEDSKSDIG 304 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYVL +KDLRT +E ++ VLDGDLD F++A+L Sbjct: 305 WGSQIRSYVLDD-SRIKDLRTGVENSNTKAVLDGDLDKFIEASLKQ 349 >gi|113969170|ref|YP_732963.1| peptide chain release factor 2 [Shewanella sp. MR-4] gi|114048688|ref|YP_739238.1| peptide chain release factor 2 [Shewanella sp. MR-7] gi|113883854|gb|ABI37906.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella sp. MR-4] gi|113890130|gb|ABI44181.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella sp. MR-7] Length = 352 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 172/343 (50%), Positives = 233/343 (67%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+D +RL ++ + E +W A+ L +ER L+ + I ++ L D Sbjct: 8 LGGIFDYDAKHERLEEVSRELESSEVWNEPERAQALGKERASLEAVVKTIDDMDSGLEDV 67 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+EE+D ET+ L ++ + +F + SG D+++ YL++ +G+GGTE Sbjct: 68 EGLLELAIEEEDEDTFNETTKELDYLESRLAELEFRRMFSGPQDASNCYLDIQSGSGGTE 127 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANM+LRMY RW E F E +E+ DG+ AGIK AT+ G A+GWL+ E GVHR Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS+ RRHTSF S++VYP +DD I I+I+ +D RID YRASGAGGQHVN T+SA Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPADLRIDVYRASGAGGQHVNRTESA 247 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT VVQCQ +RSQHKNK A L+AKL+ELE+ K+ E +K++IGWG Sbjct: 248 VRITHLPTNTVVQCQNDRSQHKNKDSAMKQLKAKLFELEMHKQNAEKQAAEDAKSDIGWG 307 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT++E + VLDGDLD F++A+L Sbjct: 308 SQIRSYVLDD-SRIKDLRTSVETRNTQAVLDGDLDKFIEASLK 349 >gi|20663625|pdb|1GQE|A Chain A, Polypeptide Chain Release Factor 2 (Rf2) From Escherichia Coli Length = 365 Score = 284 bits (726), Expect = 1e-74, Method: Composition-based stats. Identities = 182/351 (51%), Positives = 232/351 (66%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + L G D+D +RL +N + E P +W A+ L +ER L+ + + + Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQX 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D LLELA+E DD E L ++ ++ +F SGE DS D YL++ Sbjct: 74 KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRXFSGEYDSADCYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ L R Y RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 134 AGSGGTEAQDWASXLERXYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA +AKLYE+E QK+ E + Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAXKQXKAKLYEVEXQKKNAEKQAXEDN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363 >gi|78047471|ref|YP_363646.1| peptide chain release factor 2 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123585257|sp|Q3BUB7|RF2_XANC5 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|78035901|emb|CAJ23592.1| peptide chain release factor 2 [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 374 Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 182/351 (51%), Positives = 244/351 (69%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ ++ L G+FD+D +RL ++ + E P +W + A+ L RER L+ + I ++ Sbjct: 14 LNDRVLSLRGIFDYDAKKERLEEVSRELESPDVWNDAERAQALGRERSMLEKTVIGIADV 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLELA E D +L + VE +F+ + SG+ DS +A++++ Sbjct: 74 LSGLADAGDLLELAESEQDEDTALAVIADLDNYQAHVEKLEFQRMFSGQMDSANAFVDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA +LLRMY RWAE R +KTE +E+ GE AGIKSAT+ I+G AYGWLK Sbjct: 134 AGAGGTEAQDWAEILLRMYLRWAESRGWKTELMEVSGGEVAGIKSATVRIEGEYAYGWLK 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS++RRHTSF+S++V P VDD+IEI+I+ +D R D YR+SGAGGQH Sbjct: 194 TEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT VV CQ RSQH+N+ A ML AKLYELE+QKR + E++ Sbjct: 254 VNKTESAVRITHIPTNTVVACQTGRSQHQNRDNAMKMLAAKLYELEVQKRNAEKDALEAT 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIR+YVL +KDLRT IE++ VLDGDLD+F++A+L Sbjct: 314 KSDIGWGSQIRNYVLD-QSRIKDLRTGIERSDTQKVLDGDLDEFVEASLKA 363 >gi|113867189|ref|YP_725678.1| protein chain release factor B [Ralstonia eutropha H16] gi|113525965|emb|CAJ92310.1| protein chain release factor B (RF-2) [Ralstonia eutropha H16] Length = 357 Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 176/346 (50%), Positives = 248/346 (71%), Gaps = 1/346 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD+D V RL +N EDP +W N A+ L +E++ ++ +S + ++ D L Sbjct: 11 KIYGGIFDYDVKVGRLDEVNGLLEDPDVWNNPKRAQDLGKEKKAIEGVVSVLSKLTDDLS 70 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L ELA EE D L+ +++ + V +F + SGE D +A++++ AGAGG Sbjct: 71 GAEELFELAREEGDDDTLEAIEADVKGFEEIVAGMEFRRMFSGEMDQANAFIDIQAGAGG 130 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DWA+MLLR Y ++ E++ FK E LE +G+ AGIKSAT+ I+G A+G+L+ E GV Sbjct: 131 TEACDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSATIKIEGEYAFGYLRTETGV 190 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS+ RHTSFSS++VYP VDDS E+E++ +D R+DTYRASGAGGQH+N TD Sbjct: 191 HRLVRKSPFDSSGGRHTSFSSVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTD 250 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTG+VVQCQ +RSQH+N+A+A +ML+++LYE E++KR+ A+ E+ KT++G Sbjct: 251 SAVRITHIPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYEHEMRKRQAEADKLEAGKTDVG 310 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 311 WGHQIRSYVLD-QSRIKDLRTNVEMSNTQKVLDGDLDPFIEASLKQ 355 >gi|253701853|ref|YP_003023042.1| hypothetical protein GM21_3258 [Geobacter sp. M21] gi|251776703|gb|ACT19284.1| conserved hypothetical protein [Geobacter sp. M21] Length = 371 Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 176/352 (50%), Positives = 242/352 (68%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ +++ L G + D+ +R+ L T P W + A+ ++R R ++ ++ + Sbjct: 11 ELAERIDKLRGSLEVDDKKERMQELEELTSRPDFWNDAENAQKVLRSRTAMEKDVTIWES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D L+EL EE D + L E + +++ V +F +LSG D++ A++ + Sbjct: 71 LDKQARDIQELIELGSEEQDEATLAEVAAMNAQLETGVSQAEFRRMLSGPHDASGAFVSI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTESQDWA MLLRMY R+ EK+ +KTE + +G+ AG+K T + G AYG+L Sbjct: 131 NSGAGGTESQDWAEMLLRMYLRYCEKKGWKTEITDYQEGDGAGVKGVTFAVTGEFAYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGG 240 K E G+HRLVRISP+DS++RRHTSF+S +V+P + +D IEI+I+ESD RIDTYR+SGAGG Sbjct: 191 KAEAGIHRLVRISPFDSSARRHTSFASAFVFPVIEEDDIEIKIAESDLRIDTYRSSGAGG 250 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVNTTDSA+RITHIPTG VV CQ ERSQH NKA A +LR+KLYE+EL++RE A+ Sbjct: 251 QHVNTTDSAIRITHIPTGTVVACQSERSQHMNKATAMKVLRSKLYEMELREREAKASDIA 310 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K EIGWG QIRSYVL PY+MVKDLRT +E P VLDG LDDF+ L Sbjct: 311 GEKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGKPDAVLDGALDDFVVPYLM 362 >gi|319942340|ref|ZP_08016655.1| peptide chain release factor [Sutterella wadsworthensis 3_1_45B] gi|319804213|gb|EFW01113.1| peptide chain release factor [Sutterella wadsworthensis 3_1_45B] Length = 354 Score = 284 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 171/344 (49%), Positives = 236/344 (68%), Gaps = 1/344 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 GG+FD D +RL +N + E+P LW + A+ + +E++ LD+ + + + D Sbjct: 2 NFGGIFDVDRKARRLEEVNREIENPDLWNDPKHAQEVSKEKKMLDDIVGSFNRLTQGIAD 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 L EL+L E+D L+ +++ RI+ EV +F+ + + DS + YLE+ +GAGGT Sbjct: 62 AGELFELSLAEEDFDSLEVIGEDVDRIEHEVAQLEFKRMFNQPMDSANCYLEIQSGAGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDWA+ML RMY R+AE++ FK E GE AGIKS TL I+G AYG L+ E G+H Sbjct: 122 EAQDWASMLERMYMRYAERKGFKVTLEEETPGEVAGIKSCTLFIEGEWAYGTLRTETGIH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+D+N+RRHTSF+S++VYP VDDSI+IEI+ +D ID +RASGAGGQH+ T+S Sbjct: 182 RLVRKSPFDANARRHTSFTSVYVYPEVDDSIDIEINPADLSIDVFRASGAGGQHIQKTES 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRI H PTG++ CQ +RSQH+N+ +A L+AKLYELE++KR E E SK++IGW Sbjct: 242 AVRIHHKPTGIITICQDDRSQHRNREKAMQQLKAKLYELEMRKRMEAQTKLEESKSDIGW 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G QIRSYVL VKDLRT +E + VLDGDLD F++A+L Sbjct: 302 GHQIRSYVLD-QSRVKDLRTGVETGNTGGVLDGDLDQFIEASLK 344 >gi|298500779|ref|ZP_07010582.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Vibrio cholerae MAK 757] gi|297540560|gb|EFH76618.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Vibrio cholerae MAK 757] Length = 344 Score = 284 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 182/342 (53%), Positives = 241/342 (70%), Gaps = 1/342 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RL +N + E P +W A+ L +ER L+ + I ++ + D Sbjct: 1 GGIFDYDAKKERLEEVNAELEQPDVWTQPERAQALGKERSALEAVVDTIDQLDRGVDDVE 60 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LLELA+E +D E L ++ ++E +F + SG+ DS+D YL++ AG+GGTE+ Sbjct: 61 GLLELAIEAEDQETFDEIGPELDELEAKLEQLEFRRMFSGDHDSSDCYLDLQAGSGGTEA 120 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G AYGWL+ E GVHRL Sbjct: 121 QDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWLRTETGVHRL 180 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS RRHTSF+S ++YP VD++I+IEI+ +D RID YRASGAGGQHVNTT+SAV Sbjct: 181 VRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQHVNTTESAV 240 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH+PT VVQCQ +RSQHKNK QA LRAKL+ELELQK+ E +K++IGWG Sbjct: 241 RITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGS 300 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT IE + VLDGDLD F++A+L Sbjct: 301 QIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDKFIEASLK 341 >gi|282908140|ref|ZP_06315971.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910399|ref|ZP_06318203.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus aureus subsp. aureus WBG10049] gi|282325791|gb|EFB56099.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus aureus subsp. aureus WBG10049] gi|282327805|gb|EFB58087.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus aureus subsp. aureus WW2703/97] Length = 352 Score = 284 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 166/346 (47%), Positives = 224/346 (64%), Gaps = 1/346 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGGLFD +N + +P+ W N +A+ ++ + L ++ K +Q + D Sbjct: 2 KLGGLFDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDD 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 +L EE D + ++ + K +V+ + + LL G D+N+A LE+H GAGGT Sbjct: 62 MDATWDLLQEEFDGEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 ESQDWANML RMY R+ EK+ FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVH Sbjct: 122 ESQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 RLVRISP+DS+ RRHTSF+S V P +D IEIEI+ D +DT+RASGAGGQH+N T+ Sbjct: 182 RLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTE 241 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SA+RITH P+G+VV Q ERSQ KN+ A ML++KLY+L+L+++ + EIG Sbjct: 242 SAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIG 301 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYV PY MVKD RTN E V+DGD+ F+++ L Sbjct: 302 WGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLRQ 347 >gi|308198348|ref|YP_003933612.1| peptide chain release factor I [Pseudomonas aeruginosa PAO1] gi|307752087|gb|ADN93061.1| peptide chain release factor I [Pseudomonas aeruginosa PAO1] Length = 364 Score = 284 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 187/351 (53%), Positives = 250/351 (71%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + G D+D RL +N + EDP++W N A+ L RER L + + ++ Sbjct: 13 LSERTQTIRGYLDYDQKHDRLVEVNRELEDPNVWNNPEYAQNLGRERAQLAQVVETLDDL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D+ LL++A+EEDD + + ++ ++R++ +E +F + SGE D N+AYL++ Sbjct: 73 TSGLADSRDLLDMAVEEDDEGAVDDVANEVERLREILEKLEFRRMFSGEMDPNNAYLDIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWANMLLRMY RWA+K F +E+ +GE AGIK AT+ IKG A+GWL+ Sbjct: 133 AGSGGTEAQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSF++++V P +DD+IEIEI+ +D RIDTYR+SGAGGQH Sbjct: 193 TEIGVHRLVRKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPADLRIDTYRSSGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT VV CQ ERSQH NK A MLRAKLYELE+QKR + E S Sbjct: 253 VNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRTAASQALEDS 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT IE++ VLDGDLD++++A+L Sbjct: 313 KSDIGWGHQIRSYVLD-QSRIKDLRTGIERSDCDKVLDGDLDEYLEASLKQ 362 >gi|91775149|ref|YP_544905.1| peptide chain release factor 2 [Methylobacillus flagellatus KT] gi|91709136|gb|ABE49064.1| bacterial peptide chain release factor 2 (bRF-2) [Methylobacillus flagellatus KT] Length = 354 Score = 284 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 180/351 (51%), Positives = 245/351 (69%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L GG+FD+D QRL ++ EDP++W + ++ L +ER+ L+ ++ + E+ Sbjct: 3 LRSATRPYGGIFDFDTKQQRLEEVSQLLEDPNIWNDNERSQKLGKERRELEFVVNSLTEV 62 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ + D+ L E+A EE+D L+ + Q ++ V +F + S D N+ +L++ Sbjct: 63 ENGVRDSRELFEMAREENDDDTLRSIDADTQALEKIVAEMEFRRMFSHPMDQNNCFLDIQ 122 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+MLLRMY R+ E + FK E LE +G+ AGIKSA+L I G AYG+L+ Sbjct: 123 AGSGGTEAQDWASMLLRMYLRYCENKGFKVEVLEESEGDVAGIKSASLKISGDYAYGFLR 182 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSF+S++VYP VDDSI +EI+ +D RIDTYRASGAGGQH Sbjct: 183 TESGVHRLVRKSPFDSGNRRHTSFASVFVYPEVDDSIVVEINPADLRIDTYRASGAGGQH 242 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH+PT VVQCQ +RSQH+NK +A NML+A+LY LEL+KR E E + Sbjct: 243 INKTDSAVRITHLPTNTVVQCQNDRSQHRNKDEAMNMLKAQLYALELRKRNEEKQAMEDA 302 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KT+IGWG QIRSYVL +KDLRTN+E + VLDGDLD F+ +L Sbjct: 303 KTDIGWGHQIRSYVLD-QSRIKDLRTNVEVGNTQGVLDGDLDPFISESLKQ 352 >gi|152985089|ref|YP_001346821.1| peptide chain release factor 2 [Pseudomonas aeruginosa PA7] gi|150960247|gb|ABR82272.1| peptide chain release factor 2 [Pseudomonas aeruginosa PA7] Length = 382 Score = 284 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 183/344 (53%), Positives = 246/344 (71%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D RL +N + EDP++W N A+ L RER L + + ++ L D+ Sbjct: 38 FGGIFDYDQKHDRLVEVNRELEDPNVWNNPEYAQNLGRERAQLAQVVETLDDLTSGLADS 97 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LL++A+EE D + + + ++R++ +E +F + SGE D N+AYL++ AG+GGTE Sbjct: 98 RDLLDMAVEEGDEGAVGDVAGEVERLREILEKLEFRRMFSGEMDPNNAYLDIQAGSGGTE 157 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANMLLRMY RWA+K F +E+ +GE AGIK AT+ +KG A+GWL+ E GVHR Sbjct: 158 AQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIKGATVHVKGEYAFGWLRTEIGVHR 217 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS +RRHTSF++++V P +DD+IEIEI+ +D RIDTYR+SGAGGQHVNTTDSA Sbjct: 218 LVRKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPADLRIDTYRSSGAGGQHVNTTDSA 277 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT VV CQ ERSQH NK A MLRAKLYE E+QKR + E +K++IGWG Sbjct: 278 VRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYEQEMQKRTAASQALEDTKSDIGWG 337 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT IE++ VLDGDLD++++A+L Sbjct: 338 HQIRSYVLD-QSRIKDLRTGIERSDCDKVLDGDLDEYLEASLKQ 380 >gi|190149600|ref|YP_001968125.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307245141|ref|ZP_07527233.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307249543|ref|ZP_07531530.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307255961|ref|ZP_07537758.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258552|ref|ZP_07540288.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307260795|ref|ZP_07542482.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307262921|ref|ZP_07544544.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189914731|gb|ACE60983.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306853921|gb|EFM86134.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306858398|gb|EFM90467.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306861075|gb|EFM93072.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867346|gb|EFM99198.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306869521|gb|EFN01311.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306871739|gb|EFN03460.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 347 Score = 284 bits (725), Expect = 2e-74, Method: Composition-based stats. Identities = 174/344 (50%), Positives = 240/344 (69%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D V+RL +N + E P +W +A+ L +ER L+ ++ I+ + + D Sbjct: 3 FGGIFDFDAKVERLEEVNAELEQPEIWNTPEKAQALGKERSALEMVVNTIRTLDQGVEDV 62 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L+ELA+E +D E ++ ++ +F+ + SG+ D+ D Y+++ AG+GGTE Sbjct: 63 EGLIELAVEAEDEDTFNEAQAEANELEEKLAKLEFQRMFSGQHDAADCYVDLQAGSGGTE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G A+GWL+ E G+HR Sbjct: 123 AQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITGEYAFGWLRTETGIHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SA Sbjct: 183 LVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESA 242 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIP+G+VVQCQ RSQH+NK Q L+AKLYE+E+ K+ E SK++IGWG Sbjct: 243 VRITHIPSGIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNAEKQAMEESKSDIGWG 302 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 303 SQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKFIEASLKA 345 >gi|239816762|ref|YP_002945672.1| hypothetical protein Vapar_3791 [Variovorax paradoxus S110] gi|259585247|sp|C5CUX0|RF2_VARPS RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|239803339|gb|ACS20406.1| conserved hypothetical protein [Variovorax paradoxus S110] Length = 367 Score = 283 bits (724), Expect = 3e-74, Method: Composition-based stats. Identities = 170/351 (48%), Positives = 244/351 (69%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L D+D +RL +N EDP++W + +A+ L RE++ LD+ + + + Sbjct: 16 LSARTADLRRYLDYDAKAERLRTVNASLEDPNVWNDPKKAQELGREKKSLDDVVVTLDRL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN L E++ E+ D LQ +D+ ++ +++ +F + + AD +A++++ Sbjct: 76 TSGLSDNTELYEMSKEDGDMDGLQSIADDAAALETDIKQLEFRRMFNNPADPLNAFVDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y ++AE++ FKT+ + G+ AGIK AT+ ++G A+G L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLKYAERKGFKTQIEDETPGDTAGIKGATIKVEGDYAFGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ RHTSF+SI+VYP +DDSIEIEI+ +D R DT+RASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASIFVYPEIDDSIEIEINPADVRTDTFRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVR+THIPTG+VVQCQ RSQH N+ AW LR++LY+ E++KR+E E S Sbjct: 256 INKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDHEMRKRQEEQQKLEDS 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 316 KTDVGWGHQIRSYVLD-NSRIKDLRTNVEVSATQKVLDGDLDVFIEASLKQ 365 >gi|209519985|ref|ZP_03268764.1| peptide chain release factor 2 [Burkholderia sp. H160] gi|209499582|gb|EDZ99658.1| peptide chain release factor 2 [Burkholderia sp. H160] Length = 384 Score = 283 bits (724), Expect = 3e-74, Method: Composition-based stats. Identities = 177/346 (51%), Positives = 247/346 (71%), Gaps = 1/346 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD+D+ RL +N + EDP +W + A+ L +E++ LD+ + + I + + Sbjct: 38 TTYGGIFDYDDKALRLIEVNRELEDPDVWNDAKHAQALGKEKKLLDDTVGKLTSITNDVN 97 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L E+A EE D L + Q I+ V +F + + AD N+A+L++ AGAGG Sbjct: 98 DAQDLFEMAREEADDETLLACEADAQAIEARVADMEFRRMFANPADPNNAFLDIQAGAGG 157 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DWA+MLLR Y R+ E++ FKTE LE +G+ AGIK+AT+ I+G AYG+L+ E GV Sbjct: 158 TEACDWASMLLRQYLRYCERKGFKTEVLEQTEGDVAGIKNATIKIEGEYAYGFLRTETGV 217 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH+N TD Sbjct: 218 HRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTD 277 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+P+G+VVQCQ +RSQH+N+A+A ML+++LYE E++KR+ + E+ KT++G Sbjct: 278 SAVRITHMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAGKTDVG 337 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYVL +KDLRTN+E ++ VLDGDLD F+ A+L Sbjct: 338 WGHQIRSYVLD-NSRIKDLRTNVEISNTKSVLDGDLDPFISASLKQ 382 >gi|296136248|ref|YP_003643490.1| hypothetical protein Tint_1790 [Thiomonas intermedia K12] gi|295796370|gb|ADG31160.1| conserved hypothetical protein [Thiomonas intermedia K12] Length = 367 Score = 283 bits (724), Expect = 3e-74, Method: Composition-based stats. Identities = 171/350 (48%), Positives = 246/350 (70%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +++ L G D+D RL + EDP +W + A+ L RER+ L+ + ++ + Sbjct: 16 LQQRVQALRGYLDFDAKASRLMEVAGALEDPQVWNDPKRAQELGRERKSLETVVLGLESL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D+ L E++ EE D + + ++++ EVE +F + S D ++ ++++ Sbjct: 76 TTALADHSELFEMSREEGDDATCEAIEADVEKSAAEVEALEFRRMFSNPLDPSNCFIDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y R+ E++ FKTE +E +G+ AGI+SAT+ ++G AYG L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKTEVMEETEGDVAGIRSATIKVEGDYAYGQLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ RHTSF+S++VYP VDDSIEI+I+ +D R DT+RASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDDSIEIDINPADVRTDTFRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVR+TH+PTG+VVQCQ +RSQHKN+A+AW MLR++LYE E++KR ES+ Sbjct: 256 INKTDSAVRLTHMPTGIVVQCQNDRSQHKNRAEAWQMLRSRLYEHEMRKRMAEQQTLEST 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K+++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD+F+ A+L Sbjct: 316 KSDVGWGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDEFITASLK 364 >gi|297580789|ref|ZP_06942715.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Vibrio cholerae RC385] gi|297535205|gb|EFH74040.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Vibrio cholerae RC385] Length = 344 Score = 283 bits (724), Expect = 3e-74, Method: Composition-based stats. Identities = 182/342 (53%), Positives = 242/342 (70%), Gaps = 1/342 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +RL +N + E P +W A+ L +ER L+ + I ++ + D Sbjct: 1 GGIFDYDAKKERLEEVNAELEQPDVWTQPERAQALGKERSALEAVVDTIDQLDRGVDDVE 60 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LLELA+E +D E L +++++E +F + SG+ DS+D YL++ AG+GGTE+ Sbjct: 61 GLLELAIEAEDQETFDEIGPELDELEVKLEQLEFRRMFSGDHDSSDCYLDLQAGSGGTEA 120 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G AYGWL+ E GVHRL Sbjct: 121 QDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWLRTETGVHRL 180 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS RRHTSF+S ++YP VD++I+IEI+ +D RID YRASGAGGQHVNTT+SAV Sbjct: 181 VRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQHVNTTESAV 240 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH+PT VVQCQ +RSQHKNK QA LRAKL+ELELQK+ E +K++IGWG Sbjct: 241 RITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGS 300 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT IE + VLDGDLD F++A+L Sbjct: 301 QIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDKFIEASLK 341 >gi|303252568|ref|ZP_07338731.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247319|ref|ZP_07529367.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302648536|gb|EFL78729.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306856163|gb|EFM88318.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 347 Score = 283 bits (724), Expect = 3e-74, Method: Composition-based stats. Identities = 173/344 (50%), Positives = 239/344 (69%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D V+RL +N + E P +W +A+ L +ER L+ ++ I+ + + D Sbjct: 3 FGGIFDFDAKVERLEEVNAELEQPEIWNTPEKAQALGKERSALEMVVNTIRTLDQGVEDV 62 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L+ELA+E +D E ++ ++ +F+ + SG+ D+ D Y+++ AG+GGTE Sbjct: 63 EGLIELAVEAEDEDTFNEAQAEANELEEKLAKLEFQRMFSGQHDAADCYVDLQAGSGGTE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G A+GWL+ E G+HR Sbjct: 123 AQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITGEYAFGWLRTETGIHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SA Sbjct: 183 LVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESA 242 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIP+ +VVQCQ RSQH+NK Q L+AKLYE+E+ K+ E SK++IGWG Sbjct: 243 VRITHIPSDIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNAEKQAMEESKSDIGWG 302 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 303 SQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKFIEASLKA 345 >gi|167646537|ref|YP_001684200.1| peptide chain release factor 2 [Caulobacter sp. K31] gi|189039999|sp|B0SXB7|RF2_CAUSK RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|167348967|gb|ABZ71702.1| peptide chain release factor 2 [Caulobacter sp. K31] Length = 367 Score = 283 bits (724), Expect = 3e-74, Method: Composition-based stats. Identities = 205/347 (59%), Positives = 256/347 (73%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 +C GG+FDWD A+++L LN + EDP LW EA+ + R+R L + ++E++ L Sbjct: 14 DCSGGVFDWDAALRKLDELNARVEDPTLWDRPSEAQAVSRDRASLAARVGAVQELEGGLK 73 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L ELA E D ++L++ L+ +K + E+LLSGEAD ND Y+E+++GAGG Sbjct: 74 DALEYAELADMEGDEALLEDARAQLKDLKDRAGRAELEALLSGEADGNDCYVEINSGAGG 133 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TES DWA MLLRMY+RWA K E +E G++ GIKSATLL+KG NAYGWLK E GV Sbjct: 134 TESCDWAGMLLRMYSRWANAHKMSVELVEETAGDQVGIKSATLLVKGANAYGWLKTEAGV 193 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVRISPYD+ ++RHTSF+S WVYPVVDD+IEI+I+ SD R DTYRASGAGGQH+N TD Sbjct: 194 HRLVRISPYDAAAKRHTSFASAWVYPVVDDTIEIDINPSDVRTDTYRASGAGGQHINKTD 253 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+ V CQ RSQH+N+ +AW MLRA+LYE ELQ+RE E KT+IG Sbjct: 254 SAVRLTHIPTGIAVACQAGRSQHQNREEAWKMLRARLYEAELQRREAAQQALEDQKTDIG 313 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYVLQPYQMVKDLRTN+E + VLDGDLD FM A+LA + Sbjct: 314 WGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDAFMGASLAQR 360 >gi|71153099|sp|Q7VNG1|RF2_HAEDU RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 365 Score = 283 bits (724), Expect = 3e-74, Method: Composition-based stats. Identities = 174/351 (49%), Positives = 239/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + G D+D V+RL +N + E P +W +A+ L +ER L+ ++ I + Sbjct: 14 LTERTQLIRGYLDFDTKVERLEEVNAELEQPEIWNTPEKAQTLGKERSTLEMVVNTINAL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L+ELA+E +D L E + ++ +F+ + SG D+ D YL++ Sbjct: 74 IQGIEDVEALIELAVEAEDEQTLYEAQIEADELATKLAKLEFQRMFSGPYDATDCYLDLQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G A+GWL+ Sbjct: 134 AGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATIRITGEYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DSN+RRHTSF++ +VYP VDD ++IEI+ +D RID YRASGAGGQH Sbjct: 194 TETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEVDDDVDIEINPADLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH+P+G+VVQCQ RSQH+NK Q LRAKLYE+E+ K+ E + Sbjct: 254 VNKTESAVRITHMPSGIVVQCQNGRSQHQNKDQCMKQLRAKLYEMEMMKKNAEKQAMEEN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 363 >gi|319787302|ref|YP_004146777.1| hypothetical protein Psesu_1704 [Pseudoxanthomonas suwonensis 11-1] gi|317465814|gb|ADV27546.1| hypothetical protein Psesu_1704 [Pseudoxanthomonas suwonensis 11-1] Length = 375 Score = 283 bits (724), Expect = 3e-74, Method: Composition-based stats. Identities = 177/351 (50%), Positives = 244/351 (69%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ ++ L G D+D +RL +N + E P++W + A+ L RER L+ + I + Sbjct: 14 LTGRVVSLRGYLDYDAKKERLEEVNRELELPNVWDDPERAQALGRERALLEKTVGGIASV 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L + LLELA E D + ++ R + +E +F+ + SG+ D +A++++ Sbjct: 74 LEGLEGSTELLELAESEQDEETAEAVVADVDRFEKHIEALEFQRMFSGQMDGANAFVDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA MLLRMY RW E R +KTE LE+ G+ AGIKSAT ++G AYGWLK Sbjct: 134 AGAGGTEAQDWAEMLLRMYLRWCESRGWKTELLEVSGGDVAGIKSATFRVEGDFAYGWLK 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS++RRHTSF+S++V P VDD I+IEI+ +D + D YR+SGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDKIDIEINPADLKTDVYRSSGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH+P+G+VV CQ ERSQH N+ +A ML AKLYELE+QKR + E++ Sbjct: 254 VNKTESAVRITHVPSGIVVACQTERSQHANRDRAMKMLAAKLYELEIQKRNAEKDAVEAT 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIR+YVL +KDLRT IE++ VLDGDLD+F++A+L Sbjct: 314 KSDIGWGSQIRNYVLD-QSRIKDLRTGIERSDTQKVLDGDLDEFVEASLKA 363 >gi|300860397|ref|ZP_07106484.1| peptide chain release factor 2, programmed frameshift [Enterococcus faecalis TUSoD Ef11] gi|300849436|gb|EFK77186.1| peptide chain release factor 2, programmed frameshift [Enterococcus faecalis TUSoD Ef11] Length = 366 Score = 283 bits (724), Expect = 3e-74, Method: Composition-based stats. Identities = 171/353 (48%), Positives = 229/353 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++++++ D + ++ + +P W N A+ L+ E L + Sbjct: 12 EMTQKITSFRRSLCLDQLEEDIAEAENRMGEPGFWDNTETAQKLINETNSLKEKYQQFHQ 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + L + ++ EL EE D I +E + + ++ + + LL+ D N+A +E+ Sbjct: 72 LSEELDELTVMFELQQEEYDAEIQEELEERIHLLQERLTTYELSLLLNEPYDHNNALIEL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMYTRWAE F+ E L+ G+EAGIKS TLLIKG NAYG+L Sbjct: 132 HPGAGGTESQDWGSMLLRMYTRWAESHGFQVETLDYQAGDEAGIKSVTLLIKGYNAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS RRHTSF S+ V P +DD+IEI I+ D +IDTYRASGAGGQ Sbjct: 192 KSEKGVHRLVRISPFDSAKRRHTSFCSVDVMPELDDTIEIAINPDDLKIDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+N T+SAVRITHIPTG VV Q +RSQ KN+ QA +ML+AKLY+LE++K+ + A Sbjct: 252 HINKTESAVRITHIPTGTVVASQAQRSQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY MVKD RTN E + V+DGDLD F+ A L + Sbjct: 312 EQMEIGWGSQIRSYVFHPYSMVKDHRTNYETGNVQAVMDGDLDGFIDAYLKQR 364 >gi|332284056|ref|YP_004415967.1| peptide chain release factor 2 [Pusillimonas sp. T7-7] gi|330428009|gb|AEC19343.1| peptide chain release factor 2 [Pusillimonas sp. T7-7] Length = 359 Score = 283 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 174/344 (50%), Positives = 244/344 (70%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D +RL +N + E P +W + A+ L RE++ L+ + + +I + L D Sbjct: 15 FGGIFDYDAKAERLHVVNAELESPDVWNDPKHAQDLGREKKSLETVVHTLADIANGLTDA 74 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L +LA E+DD + L + I +E +F + S AD + ++++ AGAGGTE Sbjct: 75 QELFDLAAEDDDDATLAAVEADTNAIGARLEELEFRRMFSNPADPLNCFMDIQAGAGGTE 134 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA++LLR Y R+ E + FKTE LE DG+ AGIKSAT+ I+G A+G L+ E GVHR Sbjct: 135 AQDWASILLRQYLRYCEHKDFKTEVLEESDGDVAGIKSATIKIEGEYAFGLLRTETGVHR 194 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS + RHTSF+S++VYP VD+S+EI+I+ +D R+DTYRASGAGGQH+N TDSA Sbjct: 195 LVRKSPFDSANGRHTSFASVFVYPEVDESVEIDINPADLRVDTYRASGAGGQHINKTDSA 254 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VVQCQ +RSQH+N+A+A +ML+++LYELE++ R E SKT++GWG Sbjct: 255 VRITHMPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYELEMRNRMAEQQKMEDSKTDVGWG 314 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 315 HQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQ 357 >gi|258421538|ref|ZP_05684463.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus aureus A9719] gi|258423403|ref|ZP_05686294.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus aureus A9635] gi|257842464|gb|EEV66888.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus aureus A9719] gi|257846464|gb|EEV70487.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus aureus A9635] Length = 352 Score = 283 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 166/346 (47%), Positives = 224/346 (64%), Gaps = 1/346 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGGLFD +N + +P+ W N +A+ ++ + L ++ K +Q + D Sbjct: 2 KLGGLFDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDD 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 +L EE D + ++ + K +V+ + + LL G D+N+A LE+H GAGGT Sbjct: 62 MDATWDLLQEEFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 ESQDWANML RMY R+ EK+ FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVH Sbjct: 122 ESQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 RLVRISP+DS+ RRHTSF+S V P +D IEIEI+ D +DT+RASGAGGQH+N T+ Sbjct: 182 RLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTE 241 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SA+RITH P+G+VV Q ERSQ KN+ A ML++KLY+L+L+++ + EIG Sbjct: 242 SAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIG 301 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYV PY MVKD RTN E V+DGD+ F+++ L Sbjct: 302 WGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLRQ 347 >gi|83955487|ref|ZP_00964118.1| peptide chain release factor 2 [Sulfitobacter sp. NAS-14.1] gi|83840131|gb|EAP79306.1| peptide chain release factor 2 [Sulfitobacter sp. NAS-14.1] Length = 374 Score = 283 bits (723), Expect = 3e-74, Method: Composition-based stats. Identities = 200/352 (56%), Positives = 251/352 (71%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+S+ L L D + A RL N + EDP+LW + A+ LMR+RQ L ++I+ + Sbjct: 11 KISKSLELLAQRLDVETAPYRLEEFNARVEDPNLWDDPDAAQKLMRDRQALVDSIATYEG 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L DN+ L+EL E D ++ E L+++ K+ E+LL+GEAD ND +LE+ Sbjct: 71 IKQELADNIELIELGEMEGDDEVIAEAETALKKLAETAAQKELEALLNGEADGNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWAN+L RMY RWAEK+ +K E GEEAGIKSAT I GPNAYGWL Sbjct: 131 NAGAGGTESCDWANILSRMYVRWAEKKGYKVELQSESPGEEAGIKSATYKISGPNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSF+SIWVYPVVDD+IEI+I+ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSIWVYPVVDDNIEIDINPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL +R N Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRTN E + VLDGDLD M A LA+ Sbjct: 310 NKGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGLMGAALAL 361 >gi|71281667|ref|YP_270738.1| peptide chain release factor 2, programmed frameshift [Colwellia psychrerythraea 34H] gi|123631202|sp|Q47WT4|RF2_COLP3 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|71147407|gb|AAZ27880.1| peptide chain release factor 2, programmed frameshift [Colwellia psychrerythraea 34H] Length = 365 Score = 283 bits (723), Expect = 4e-74, Method: Composition-based stats. Identities = 172/351 (49%), Positives = 238/351 (67%), Gaps = 1/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + N L G D+D +RL ++ + E P +W A+ L +ER L+ ++ I E Sbjct: 13 EIRERANLLRGYLDYDVKAERLVEVSRELELPDVWNEPERAQALGKERSSLEEVVNTIVE 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ D L+ELA+EE D + + +E +F + SGE D+N++YL++ Sbjct: 73 LETGCEDIEGLVELAVEESDQETFDDAEVEADALDKVLEKLEFRRMFSGEQDANNSYLDI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +G+GGTE+QDWA ML+RMY RW E +KTE +E+ DG+ AGIK T+ G AYGWL Sbjct: 133 QSGSGGTEAQDWAEMLMRMYLRWGEAHGYKTEVIEVTDGDVAGIKGCTIKYTGEYAYGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+IEI+I+ +D RIDT+RASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNIEIDINPADLRIDTFRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSA+RITH PTG VV CQ +RSQHKN+A A +L+AKLYE+E+QK+ + E Sbjct: 253 HVNKTDSAIRITHEPTGAVVACQADRSQHKNRATAMKLLKAKLYEMEMQKQNSDKQVLED 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 313 GKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKFLEASLK 362 >gi|83942252|ref|ZP_00954713.1| peptide chain release factor 2 [Sulfitobacter sp. EE-36] gi|83846345|gb|EAP84221.1| peptide chain release factor 2 [Sulfitobacter sp. EE-36] Length = 374 Score = 283 bits (723), Expect = 4e-74, Method: Composition-based stats. Identities = 200/352 (56%), Positives = 251/352 (71%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+S+ L L D + A RL N + EDP+LW + A+ LMR+RQ L ++I+ + Sbjct: 11 KISKSLELLAQRLDVETAPYRLEEFNARVEDPNLWDDPDAAQKLMRDRQALVDSIATYEG 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L DN+ L+EL E D ++ E L+++ K+ E+LL+GEAD ND +LE+ Sbjct: 71 IKQELADNIELIELGEMEGDDEVIAEAETALKKLAETAAQKELEALLNGEADGNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWAN+L RMY RWAEK+ +K E GEEAGIKSAT I GPNAYGWL Sbjct: 131 NAGAGGTESCDWANILSRMYVRWAEKKGYKVELQSESPGEEAGIKSATYKISGPNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSF+SIWVYPVVDD+IEI+I+ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSIWVYPVVDDNIEIDINPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL +R N Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRTN E + VLDGDLD M A LA+ Sbjct: 310 NKGDAGWGNQIRSYVLQPYQMVKDLRTNYETSDTKGVLDGDLDGLMGAALAL 361 >gi|227824555|ref|ZP_03989387.1| peptide chain release factor [Acidaminococcus sp. D21] gi|226905054|gb|EEH90972.1| peptide chain release factor [Acidaminococcus sp. D21] Length = 382 Score = 283 bits (723), Expect = 4e-74, Method: Composition-based stats. Identities = 164/354 (46%), Positives = 233/354 (65%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L +L L + +R+ L+ + P W + +A+ + +E +L + + Sbjct: 28 ELRNRLGELKTGLKIEPKKERIQDLDYQMAAPGFWDDPDKAQKVAQEANNLKSEVDTFTS 87 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ ++ D L E+A+EE D +++ E L+ K + + LLS E D+N+A + + Sbjct: 88 LETKVDDLDTLWEMAMEEKDDTLVSEMESELEGAKHTLSELELGMLLSDEYDANNAIMNL 147 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTE+QDW MLLRM+TR+AE + F+ E L++ GEEAG KSATL IKG NAYG+L Sbjct: 148 HAGAGGTEAQDWTGMLLRMFTRYAEGKGFEVELLDVLPGEEAGTKSATLAIKGHNAYGFL 207 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DSN+RRHTSF+++ V P +D+++E+ I+ D R+D YRASGAGGQ Sbjct: 208 KSEKGVHRLVRISPFDSNARRHTSFAAVDVMPEIDNTVEVNINMDDVRVDYYRASGAGGQ 267 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T SAVR+TH+PTG+VVQCQ ERSQ +NK + +LRAKL+E E +++ + Sbjct: 268 HVNKTSSAVRMTHLPTGIVVQCQNERSQLQNKERCLQLLRAKLFEYEKAIQDQKISDLAG 327 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 I WG QIRSYV QPY +VKD RT E + V+DGDLD F+++ L K Sbjct: 328 DYQAIEWGSQIRSYVFQPYTLVKDHRTGAETGNIQAVMDGDLDLFVESYLRSLK 381 >gi|117921735|ref|YP_870927.1| peptide chain release factor 2 [Shewanella sp. ANA-3] gi|117614067|gb|ABK49521.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella sp. ANA-3] Length = 352 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 173/343 (50%), Positives = 234/343 (68%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+D +RL ++ + E +W A+ L +ER L+ + I ++ L D Sbjct: 8 LGGIFDYDAKHERLEEVSRELESSEVWNEPERAQALGKERASLEAVVKTIDDMDAGLEDV 67 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLELA+EE+D ET+ L ++ + +F + SG+ D++D YL++ +G+GGTE Sbjct: 68 EGLLELAIEEEDEDTFNETTKELDYLESRLAELEFRRMFSGQHDASDCYLDIQSGSGGTE 127 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANM+LRMY RW E F E +E+ DG+ AGIK AT+ G A+GWL+ E GVHR Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS+ RRHTSF S++VYP +DD I I+I+ +D RID YRASGAGGQHVN T+SA Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPADLRIDVYRASGAGGQHVNRTESA 247 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT VVQCQ +RSQHKNK A L+AKL+ELE+ K+ E +K++IGWG Sbjct: 248 VRITHLPTNTVVQCQNDRSQHKNKDSAMKQLKAKLFELEMHKQNAEKQAAEDAKSDIGWG 307 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT++E + VLDGDLD F++A+L Sbjct: 308 SQIRSYVLDD-SRIKDLRTSVETRNTQAVLDGDLDKFIEASLK 349 >gi|319783261|ref|YP_004142737.1| hypothetical protein Mesci_3567 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169149|gb|ADV12687.1| hypothetical protein Mesci_3567 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 376 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 233/353 (66%), Positives = 290/353 (82%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + + L FDWD A++RL +LN + ED LW +EA+ LMRERQ L+ I+ +K Sbjct: 11 EIRQAITLLRRHFDWDQAIKRLEYLNVRAEDASLWNEPLEAQKLMRERQSLEEGIASVKG 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L DN+ L+EL EE D ++ E ++ ++ E + +Q E+LLSGEADSND YLE+ Sbjct: 71 LTQALEDNIGLIELGEEERDEGVIAEAEAAIRSMQGEAKARQVETLLSGEADSNDTYLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA+MLLRMYTRWAE+R+FK E LE+HDGEEAGIKSATL+IKG NAYGW+ Sbjct: 131 HAGAGGTESQDWASMLLRMYTRWAERRRFKVEVLEMHDGEEAGIKSATLMIKGHNAYGWM 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDSN+RRHTSF+S+WVYPV+DD+IEI++SESD RIDTYR+SG+GGQ Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFASVWVYPVIDDTIEIDVSESDVRIDTYRSSGSGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+ TG+ V CQ ERSQHKNKA+AW MLR++LYE EL+KRE +AN E+ Sbjct: 251 HVNTTDSAVRITHLATGIAVACQAERSQHKNKAKAWEMLRSRLYEEELKKREAVANATEA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 SK++IGWG QIRSYVLQPYQ+VKDLRT +E TSPS VLDGDLDDFM+A+L+ + Sbjct: 311 SKSDIGWGHQIRSYVLQPYQLVKDLRTGVESTSPSSVLDGDLDDFMEASLSQR 363 >gi|300022372|ref|YP_003754983.1| hypothetical protein Hden_0845 [Hyphomicrobium denitrificans ATCC 51888] gi|299524193|gb|ADJ22662.1| conserved hypothetical protein [Hyphomicrobium denitrificans ATCC 51888] Length = 377 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 191/352 (54%), Positives = 257/352 (73%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L DW+ A RL+ LN K EDP+LW + A+ +MR+RQ L+ ++ K + Sbjct: 12 IKEAIALLRRSLDWETAEDRLASLNAKAEDPNLWSDAKNAQKVMRQRQTLERSVEDFKRL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 Q D L L+EL E D + + E L+R+ LE + E++LSGEAD Y+EVH Sbjct: 72 QRDYDDALTLIELGEAESDEASVSEGEAALKRVDLEAHRRSVEAMLSGEADGMSTYVEVH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTESQDWA+ML RMY RW E+R +K + ++ GEEAGIKSAT I G NA+GWLK Sbjct: 132 AGAGGTESQDWASMLARMYARWGERRGYKVKLIDESPGEEAGIKSATFEIDGDNAFGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DSN+RRHTSF+S+ VYPV+DD+IE++I+ +D I R+SGAGGQH Sbjct: 192 TEAGVHRLVRISPFDSNARRHTSFASVTVYPVIDDTIEVDINPADVDISFARSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVR+ H P+G+V+ Q++RSQH+NK A+ L+A+LYE+EL+KRE AN +++ Sbjct: 252 VNRTESAVRLVHKPSGIVIFAQEQRSQHQNKDIAFRRLKARLYEMELKKREAKANAEQAA 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT+IGWG QIRSYVLQPYQ+VKDLRT + T+PS+VLDGD+D F++A L+ + Sbjct: 312 KTDIGWGHQIRSYVLQPYQLVKDLRTGAQSTNPSEVLDGDIDPFIEAALSQR 363 >gi|114331309|ref|YP_747531.1| peptide chain release factor 2 [Nitrosomonas eutropha C91] gi|114308323|gb|ABI59566.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrosomonas eutropha C91] Length = 348 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 178/347 (51%), Positives = 242/347 (69%), Gaps = 1/347 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + GG+FD+D RL+ L ++EDP +W + A+ L RE++ L+N + ++ I +L Sbjct: 1 MKFYGGIFDFDAKQVRLTELERQSEDPAIWNDPARAQELGREKKSLENIVFTLRSIDRQL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LL++A EE D L S+++ + VE +F + S D N+ ++++ +G+G Sbjct: 61 QDAQELLQIAQEESDDETLHSISEDVAGLAKTVEEMEFHRMFSDPMDPNNCFIDIQSGSG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWA+ML RMY + E+R E LE G+ AGIKSAT+ + G AYG+L+ E G Sbjct: 121 GTEAQDWASMLERMYLHYCERRGLAVELLEESPGDVAGIKSATIKVSGEYAYGYLRTETG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR SP+DS +RRHTSF+S++VYP VDDSIEI+I+ +D R+DTYRASGAGGQH+N T Sbjct: 181 VHRLVRKSPFDSGNRRHTSFASVFVYPEVDDSIEIDINPADLRVDTYRASGAGGQHINKT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIPTG+VVQCQ RSQH+N+A A +L+++LYE EL+KR E E SKT+I Sbjct: 241 DSAVRITHIPTGIVVQCQSGRSQHRNRADAMTVLKSRLYEAELRKRNETKQAIEDSKTDI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYVL +KDLRTNIE + VLDGDLD F++A+L Sbjct: 301 AWGHQIRSYVLD-QSRIKDLRTNIEVGNTQAVLDGDLDVFIEASLKQ 346 >gi|322420980|ref|YP_004200203.1| peptide chain release factor 2 [Geobacter sp. M18] gi|320127367|gb|ADW14927.1| Peptide chain release factor 2 [Geobacter sp. M18] Length = 371 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 174/351 (49%), Positives = 245/351 (69%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +++ L GLFD D+ +R+ L+ T P W + A+ +++ R ++ ++ + + Sbjct: 12 LVERIDKLRGLFDVDDKKERMQELDELTNRPDFWNDAENAQKVLKARTAMEKDVTAWENL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L+EL EE+D + L E + ++ V +F +LSG D++ A++ ++ Sbjct: 72 DRQARDIRELIELGSEEEDEATLAEVAAMNAELENGVSQAEFRRMLSGPHDASGAFVSIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDWA MLLRMY R+ EK+ ++TE + +G+ AGIK T G AYG+LK Sbjct: 132 SGAGGTESQDWAEMLLRMYLRYCEKKGWRTEITDYQEGDGAGIKGVTFAATGEFAYGYLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQ 241 + G+HRLVRISP+DS++RRHTSF+S++V+P + ++ IE++I+ESD RIDTYR+SGAGGQ Sbjct: 192 ADAGIHRLVRISPFDSSARRHTSFASVFVFPVIEEEDIEVKIAESDLRIDTYRSSGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSA+RITH+PTG+VV CQ ERSQH NKA A +LR+KLYE+EL++RE A+ Sbjct: 252 HVNTTDSAIRITHLPTGIVVACQSERSQHMNKATAMKVLRSKLYEMELREREAKASDIAG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K EIGWG QIRSYVL PY+MVKDLRT +E +P VLDG LDDF+ L Sbjct: 312 EKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGALDDFVVPFLM 362 >gi|91794477|ref|YP_564128.1| peptide chain release factor 2 [Shewanella denitrificans OS217] gi|91716479|gb|ABE56405.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella denitrificans OS217] Length = 352 Score = 282 bits (722), Expect = 4e-74, Method: Composition-based stats. Identities = 177/343 (51%), Positives = 232/343 (67%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD+ N +RL ++ + E +W A+ L +ER L+ + I ++ L D Sbjct: 8 LGGIFDYANKKERLEEVSLELESSAVWNEPERAQALGKERSALEAVVKTIDDLDSGLEDI 67 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L+ELA+EEDD E S L ++ +E +F + SG DS D YL++ +G+GGTE Sbjct: 68 EGLVELAIEEDDEDTFNEASAELDELERRLEDLEFRRMFSGPNDSADCYLDIQSGSGGTE 127 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANM+LRMY RW E F E +E+ DG+ AGIK AT+ G A+GWL+ E GVHR Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS+ RRHTSF S++VYP +DD IEI+I+ S+ RIDTYRASGAGGQHVN T+SA Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDIEIDINPSELRIDTYRASGAGGQHVNKTESA 247 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 +RITH+PT VVQCQ RSQHKNK A L+AKLYELE+ K+ E +K++IGWG Sbjct: 248 IRITHLPTNTVVQCQSGRSQHKNKDSAMKQLKAKLYELEMMKQNVDKQAAEDAKSDIGWG 307 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 308 SQIRSYVLDD-ARIKDLRTGVENRNTQTVLDGDLDKFIEASLK 349 >gi|116494437|ref|YP_806171.1| protein chain release factor B [Lactobacillus casei ATCC 334] gi|227535599|ref|ZP_03965648.1| peptide chain release factor RF2 [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239631186|ref|ZP_04674217.1| peptide chain release factor 2 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301065947|ref|YP_003787970.1| protein chain release factor B [Lactobacillus casei str. Zhang] gi|116104587|gb|ABJ69729.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus casei ATCC 334] gi|227186729|gb|EEI66796.1| peptide chain release factor RF2 [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239525651|gb|EEQ64652.1| peptide chain release factor 2 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300438354|gb|ADK18120.1| Protein chain release factor B [Lactobacillus casei str. Zhang] gi|327381888|gb|AEA53364.1| Peptide chain release factor 2 [Lactobacillus casei LC2W] gi|327385049|gb|AEA56523.1| Peptide chain release factor 2 [Lactobacillus casei BD-II] Length = 368 Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats. Identities = 155/349 (44%), Positives = 223/349 (63%) Query: 6 QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 +L LGG FD D +R++ + +P W + A+ ++ L +++ Sbjct: 13 KLINLGGHFDLDALNERITENEGRMAEPGFWDDSEAAQKVIDNNNALKEKHDRFYALENE 72 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 L D EL +E D + QE ++ ++ +++ + + LL+G D N+A LE+H GA Sbjct: 73 LEDLEAGFELLQDEPDKDLQQEEEAKIKDLQEKLDKYEMQLLLNGPYDHNNAILEIHPGA 132 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTESQDW +ML+RMY RWA++ FK E + G+EAGIKS TLLI G NAYG LK E+ Sbjct: 133 GGTESQDWGSMLMRMYQRWADQNGFKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEK 192 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVRISP+DS RRHTSF+S+ V P +D+SIE+++ D +++ +R+SGAGGQH+N Sbjct: 193 GVHRLVRISPFDSAGRRHTSFASVDVMPELDNSIEVDLRPEDIKMEVFRSSGAGGQHINK 252 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T SAVR+ H+PTG+V Q +RSQ +NKA A ML+AKLY+ E + + A + + + Sbjct: 253 TSSAVRLIHLPTGIVTSSQAQRSQFQNKATAMAMLKAKLYQREEEAKRAKAKAIQGEQKD 312 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +G QIRSYV PY MVKD RTN E + + V+DGDL+ F+ A L + Sbjct: 313 VAFGSQIRSYVFHPYTMVKDHRTNYETGNGNAVMDGDLNPFINAYLQWE 361 >gi|54307774|ref|YP_128794.1| putative peptide chain release factor 2 [Photobacterium profundum SS9] gi|46912197|emb|CAG18992.1| putative peptide chain release factor 2 [Photobacterium profundum SS9] Length = 353 Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats. Identities = 179/346 (51%), Positives = 239/346 (69%), Gaps = 1/346 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L LGG FD+D ++L +N + E P +W A+ L + R L+ + I ++ + Sbjct: 6 LTSLGGTFDYDAKKEQLEEVNAELEQPAVWNEPERAQALGKSRAALEAVVETIDQLDLGV 65 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LLELA+EEDD E L ++ ++ +F + SGE DS+D Y+++ AG+G Sbjct: 66 EDVAGLLELAVEEDDQETFDEIEPELAELEAKLAKLEFRRMFSGEYDSSDCYIDLQAGSG 125 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW +M+LRMY RWA+ + FKTE +E+ G+ AG+KSAT+ + G AYGWL+ E G Sbjct: 126 GTEAQDWTSMMLRMYLRWADAKGFKTEIIEVSAGDVAGLKSATIRLVGEYAYGWLRTETG 185 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR SP+DS RRHTSF+S +VYP +DD+I I+I+ SD RID YRASGAGGQHVNTT Sbjct: 186 VHRLVRKSPFDSGGRRHTSFASAFVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTT 245 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITH+PT +VVQCQ +RSQHKNK QA L+AKL+E E+QK+ E SK++I Sbjct: 246 ESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEFEMQKKNAEKQANEDSKSDI 305 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 GWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 306 GWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLK 350 >gi|255029564|ref|ZP_05301515.1| peptide chain release factor 2 [Listeria monocytogenes LO28] Length = 366 Score = 282 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 175/351 (49%), Positives = 230/351 (65%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 ++Q+ GLFD D+ R++ L + DP+ W + A+ ++ E ++ Sbjct: 14 AQQIKDFRGLFDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALE 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + I LEL EE D + +E +++ + + + +LS D N+A LE+H Sbjct: 74 EEQESMEISLELLKEEADEDLQEELEKDIKAYMATISAFELKLMLSDPYDKNNAILELHP 133 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTESQDW +MLLRMY RW+EK+ FK E L+ G+EAGIKS TLLIKG NAYG+LK Sbjct: 134 GAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKA 193 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+DS+ RRHTSF S+ V P +D IEIE+ D +IDTYRA+GAGGQH+ Sbjct: 194 EKGVHRLVRISPFDSSGRRHTSFVSVDVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHI 253 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSAVR+THIP+G+VV CQ ERSQ KN+ QA ML+ KLY+ E +++E + Sbjct: 254 NTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQ 313 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 EIGWG QIRSYV PY MVKD RTN E + V+DGDLDDF+ A L + Sbjct: 314 KEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 364 >gi|121603978|ref|YP_981307.1| peptide chain release factor 2 [Polaromonas naphthalenivorans CJ2] gi|120592947|gb|ABM36386.1| bacterial peptide chain release factor 2 (bRF-2) [Polaromonas naphthalenivorans CJ2] Length = 347 Score = 282 bits (721), Expect = 5e-74, Method: Composition-based stats. Identities = 166/343 (48%), Positives = 240/343 (69%), Gaps = 1/343 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+ ++L+ +N EDP +W N A+ L RE++ L++ + + ++ L DN Sbjct: 4 GGIFDYPAKARKLNEVNAALEDPKVWDNPKRAQELGREKKSLEDVVLILDRLEQELSDNT 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L E++ +++D + ++ ++ EVE +F + + AD + +L++ AGAGGTE+ Sbjct: 64 ELFEMSKDDNDEAGMRAIEGEAAKVAAEVEKMEFRRMFNNPADPLNCFLDIQAGAGGTEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA+MLLR Y ++AE++ FKT + G+ AGIK AT+ I+G A+G L+ E GVHRL Sbjct: 124 CDWASMLLRQYLKYAERKGFKTTIEDESAGDTAGIKGATIKIEGEYAFGLLRTETGVHRL 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS+ RHTSF+S++VYP +DDSIEI+I+ +D R DTYRASGAGGQH+N TDSAV Sbjct: 184 VRKSPFDSSGGRHTSFASVFVYPEIDDSIEIDINPADVRTDTYRASGAGGQHINKTDSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+THIPTG+VVQCQ+ RSQH N+ AW LR++LY+ EL+K++E E +KT++GWG Sbjct: 244 RLTHIPTGIVVQCQEGRSQHGNRDVAWKRLRSRLYDFELRKQQEAQQKLEDTKTDVGWGH 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRTN E ++ VLDGDLD F++A+L Sbjct: 304 QIRSYVLD-NSRIKDLRTNYETSATQKVLDGDLDPFIEASLKQ 345 >gi|33151768|ref|NP_873121.1| peptide chain release factor 2 [Haemophilus ducreyi 35000HP] gi|33147989|gb|AAP95510.1| peptide chain release factor 2 [Haemophilus ducreyi 35000HP] Length = 351 Score = 282 bits (721), Expect = 6e-74, Method: Composition-based stats. Identities = 175/346 (50%), Positives = 239/346 (69%), Gaps = 1/346 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 + GG+FD+D V+RL +N + E P +W +A+ L +ER L+ ++ I + + Sbjct: 5 SSFGGIFDFDTKVERLEEVNAELEQPEIWNTPEKAQTLGKERSTLEMVVNTINALIQGIE 64 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L+ELA+E +D L E + ++ +F+ + SG D+ D YL++ AG+GG Sbjct: 65 DVEALIELAVEAEDEQTLYEAQIEADELATKLAKLEFQRMFSGPYDATDCYLDLQAGSGG 124 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G A+GWL+ E G+ Sbjct: 125 TEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATIRITGEYAFGWLRTETGI 184 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DSN+RRHTSF++ +VYP VDD ++IEI+ +D RID YRASGAGGQHVN T+ Sbjct: 185 HRLVRKSPFDSNNRRHTSFAAAFVYPEVDDDVDIEINPADLRIDVYRASGAGGQHVNKTE 244 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+P+G+VVQCQ RSQH+NK Q LRAKLYE+E+ K+ E +K++IG Sbjct: 245 SAVRITHMPSGIVVQCQNGRSQHQNKDQCMKQLRAKLYEMEMMKKNAEKQAMEENKSDIG 304 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 305 WGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 349 >gi|83951928|ref|ZP_00960660.1| peptide chain release factor 2 [Roseovarius nubinhibens ISM] gi|83836934|gb|EAP76231.1| peptide chain release factor 2 [Roseovarius nubinhibens ISM] Length = 375 Score = 282 bits (721), Expect = 6e-74, Method: Composition-based stats. Identities = 202/352 (57%), Positives = 250/352 (71%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L L DWD A RL N + EDP+LW + +A+ LMRERQ L +AI Sbjct: 11 EIEKSLELLRQRMDWDTAKHRLEEFNARVEDPNLWDDPAKAQKLMRERQSLVDAIDTHDA 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I + DN+ L+EL E D ++ E L+ +K + K+ E+LL+GEAD+ND +LE+ Sbjct: 71 INQEMSDNIELIELGEMEGDNEVIGEAESALKSLKEKAGAKELEALLNGEADANDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA+ML RMY RWAEKR + E GEEAGIKSA I G NAYGWL Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKRGYTVELQSESAGEEAGIKSAAYKISGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS ++RHTSFSS+WVYPVVDD IEIE++ +D RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPYDSAAKRHTSFSSVWVYPVVDDDIEIEVNPADIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL +R N Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRTADINAAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRTN+E + VLDGDLD FM ATLA+ Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTNVETSDTKGVLDGDLDQFMAATLAM 361 >gi|163748442|ref|ZP_02155696.1| peptide chain release factor 2 [Shewanella benthica KT99] gi|161332020|gb|EDQ02697.1| peptide chain release factor 2 [Shewanella benthica KT99] Length = 352 Score = 282 bits (721), Expect = 6e-74, Method: Composition-based stats. Identities = 167/343 (48%), Positives = 230/343 (67%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D +RL ++ + E +W + A+ L +ER L+ + I ++ L D Sbjct: 8 FGGIFDYDAKKERLEEVSRELESSDIWNDPDNAQALGKERAALELIVKTIDDMDTGLEDV 67 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L+ELA+EE D + S L + + +F + SG D ++YL++ +G+GGTE Sbjct: 68 EGLVELAIEEADEETFNDASAELDGLDKRLADLEFRRMFSGPHDIANSYLDIQSGSGGTE 127 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANM+LRMY RW + FK E +E+ G+ AGIK AT+ G A+G L+ E GVHR Sbjct: 128 AQDWANMVLRMYLRWGDAHDFKPELIEVTAGDVAGIKGATIKFTGEYAFGSLRTETGVHR 187 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS+ +RHTSF S++VYP +DD+IEI+I+ SD RIDTYRASGAGGQH+N T+SA Sbjct: 188 LVRKSPFDSSGKRHTSFCSVFVYPEIDDTIEIDINPSDLRIDTYRASGAGGQHINKTESA 247 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 +RITH+PT VVQCQ +RSQHKN+ A L+AKLYELE+ K+ E E +K++IGWG Sbjct: 248 IRITHLPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNEEKQAAEDAKSDIGWG 307 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 308 SQIRSYVLDD-ARIKDLRTGVESRNTQSVLDGGLDMFIEASLK 349 >gi|307332073|ref|ZP_07611163.1| serine/threonine protein kinase [Streptomyces violaceusniger Tu 4113] gi|306882296|gb|EFN13392.1| serine/threonine protein kinase [Streptomyces violaceusniger Tu 4113] Length = 830 Score = 282 bits (721), Expect = 6e-74, Method: Composition-based stats. Identities = 158/353 (44%), Positives = 218/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + +L + +E+ Sbjct: 473 LSSTMGSIEAVLDLDKMRADIAVLEEQAAAPSLWDDPENAQKVTSKLSYLQGHLRRAEEL 532 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA +E D E L+ ++ V+ + +LLSGE DS +A + V Sbjct: 533 RGRIDDLEVLFELAADEGDADARAEAESELEAVRKAVDEMEVRTLLSGEYDSREALVNVR 592 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KT+ E EEAGIKS T ++ P AYG L Sbjct: 593 AEAGGVDAADFAEQLQRMYLRWAERHGYKTQIYETSYAEEAGIKSTTFAVQIPYAYGTLS 652 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 653 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 712 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ + + + Sbjct: 713 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMDALKGD 772 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P VLDG++D F++A + +K Sbjct: 773 GGN-SWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLEAGIRWRK 824 >gi|296111417|ref|YP_003621799.1| peptide chain release factor 2 [Leuconostoc kimchii IMSNU 11154] gi|295832949|gb|ADG40830.1| peptide chain release factor 2 [Leuconostoc kimchii IMSNU 11154] Length = 372 Score = 282 bits (721), Expect = 7e-74, Method: Composition-based stats. Identities = 153/354 (43%), Positives = 223/354 (62%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + D + + ++ + +P W + ++A+ ++ E L N Sbjct: 12 EIKENITRFRSTLDLEALTEEIADFENRMTEPGFWDDNVKAQKVIEENNVLKNRRDSFLN 71 Query: 62 IQDRLCDNLILLEL-ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 + ++ + +L+E+ + + DD +L E +N+ +I+ +VE E LL+ D+N+A LE Sbjct: 72 LTNQAEEIDVLIEMLSEDPDDVEMLAELEENVAKIQKDVEAYNLEQLLTEPYDANNAILE 131 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 VH G+GGTES DW L RMYTRWA++ F+ + L+ H G+EAGI SAT+ I G NA+G+ Sbjct: 132 VHPGSGGTESTDWGANLYRMYTRWAQQHGFQVDVLDYHAGDEAGIDSATIKITGHNAFGF 191 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ E+GVHR VRISP+DS RRHTSF S+ V P +DD+IE+E+ + D ++D +R+ GAGG Sbjct: 192 LRSEKGVHRFVRISPFDSAGRRHTSFVSVDVMPELDDTIEVEVRDDDIKMDVFRSGGAGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q+VN + VR+TH PTG+VV ER+Q+ N+ A +L+ KLY+LEL+K+E Sbjct: 252 QNVNKVSTGVRLTHEPTGIVVSSTVERTQYGNRDYAMRLLKGKLYQLELEKQEAERAALT 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K E GWG QIRSYVL PYQMVKD RTN E P VLDGDLD F+ A L + Sbjct: 312 GEKLENGWGSQIRSYVLHPYQMVKDHRTNYETNQPQQVLDGDLDPFINAYLQWQ 365 >gi|162447197|ref|YP_001620329.1| peptide chain release factor RF-2 [Acholeplasma laidlawii PG-8A] gi|189039998|sp|A9NF23|RF2_ACHLI RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|161985304|gb|ABX80953.1| peptide chain release factor RF-2 [Acholeplasma laidlawii PG-8A] Length = 365 Score = 282 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 163/355 (45%), Positives = 223/355 (62%), Gaps = 3/355 (0%) Query: 1 MKL-SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59 ++L ++ L D D RL + +P+ W + +AK + +E L I Sbjct: 10 LELFETKIKDLENALDLDAINNRLKEIEPIMANPNFWNDSNQAKKISQELNQLTEKKQTI 69 Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 IQ++ D L+ L ++ + ++ ++ + E LL+GE D N+A L Sbjct: 70 TSIQNQYEDA--LMWLEEAKEGTESWDILEAEIDSLQKKISEFEIEVLLNGEYDHNNAIL 127 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 E+H GAGGTES DW +L+RMY R+A + +K E L GEEAG+KS TL I GP AYG Sbjct: 128 ELHPGAGGTESMDWCGILMRMYERFAGYKGYKVEILNYLAGEEAGVKSVTLRISGPYAYG 187 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 LK E+GVHRLVRISP+DSN RRHTSF S V P +D++ E+E+ + D R+DT+++SGAG Sbjct: 188 NLKSERGVHRLVRISPFDSNKRRHTSFVSCDVAPEIDETSEVELKDDDIRMDTFQSSGAG 247 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTT SAVR+THIPTG+VV Q ERSQ KNK A +L++KL + EL++++ N Sbjct: 248 GQSVNTTYSAVRLTHIPTGIVVNIQNERSQIKNKEAAMQILKSKLIQKELEEKQAKLNAL 307 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + K++IGWG QIRSYV QPYQMVKD RTN E + V+DGD+D F+ A L K Sbjct: 308 KGEKSDIGWGSQIRSYVFQPYQMVKDHRTNYEVGNIQSVMDGDIDGFINAYLKSK 362 >gi|90413184|ref|ZP_01221180.1| putative peptide chain release factor 2 [Photobacterium profundum 3TCK] gi|90325875|gb|EAS42327.1| putative peptide chain release factor 2 [Photobacterium profundum 3TCK] Length = 353 Score = 282 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 179/346 (51%), Positives = 239/346 (69%), Gaps = 1/346 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L LGG FD+D ++L +N + E P +W A+ L + R L+ + I ++ + Sbjct: 6 LTFLGGTFDYDAKKEQLEEVNAELEQPAVWNEPERAQALGKSRAALEAVVETIDQLDLGV 65 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LLELA+EEDD E L ++ ++ +F + SGE DS+D Y+++ AG+G Sbjct: 66 EDVAGLLELAVEEDDQETFDEIEPELAELEAKLAKLEFRRMFSGEYDSSDCYIDLQAGSG 125 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW +M+LRMY RWA+ + FKTE +E+ G+ AG+KSAT+ + G AYGWL+ E G Sbjct: 126 GTEAQDWTSMMLRMYLRWADAKGFKTEIIEVSAGDVAGLKSATIRLVGEYAYGWLRTETG 185 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR SP+DS RRHTSF+S +VYP +DD+I I+I+ SD RID YRASGAGGQHVNTT Sbjct: 186 VHRLVRKSPFDSGGRRHTSFASAFVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTT 245 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITH+PT +VVQCQ +RSQHKNK QA L+AKL+E E+QK+ E SK++I Sbjct: 246 ESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEFEMQKQNAEKQANEDSKSDI 305 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 GWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 306 GWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLK 350 >gi|115311855|sp|Q49VV3|RF2_STAS1 RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 373 Score = 282 bits (720), Expect = 7e-74, Method: Composition-based stats. Identities = 160/352 (45%), Positives = 227/352 (64%), Gaps = 1/352 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + +L L G D + + DP W N +A+ ++ + L + ++ + ++ Sbjct: 14 NEKLEQLRGSLDLEAKETNIQEYEEMMTDPTFWDNQEKAQDVIDKNNALKSVVNAYRTLE 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D L LEEDD ++ Q+ ++Q K E++ + + LL G D+N+A +E+H Sbjct: 74 SELEDMDTTRALLLEEDDETMKQDLEQSVQDFKNELDQFELQLLLDGPYDANNAIMELHP 133 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTESQDW NMLLRMY R+ E++ F E + G+EAG+KS TL++KG NAYG+LK Sbjct: 134 GAGGTESQDWTNMLLRMYQRYCEQKGFNVEIADYLPGDEAGVKSVTLIVKGHNAYGYLKA 193 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS+ RRHTSF+S V P ++ IEI+I+ D +DT+RASGAGGQH Sbjct: 194 EKGVHRLVRISPFDSSGRRHTSFASCDVIPQFNNTEIEIDINPDDITVDTFRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T+SA+RITH PTG+VV Q ERSQ KN+ A L++KLY+L+++++E+ Sbjct: 254 INKTESAIRITHHPTGIVVNNQNERSQIKNREAAMKTLKSKLYQLKIEEQEQEMAEIRGE 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY MVKD RTN E V+DGD+ F++A L + Sbjct: 314 QKEIGWGSQIRSYVFHPYAMVKDHRTNEETGKVDAVMDGDIGPFIEAFLRSQ 365 >gi|254510235|ref|ZP_05122302.1| peptide chain release factor 2 [Rhodobacteraceae bacterium KLH11] gi|221533946|gb|EEE36934.1| peptide chain release factor 2 [Rhodobacteraceae bacterium KLH11] Length = 375 Score = 282 bits (720), Expect = 8e-74, Method: Composition-based stats. Identities = 200/352 (56%), Positives = 254/352 (72%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L L D++ A+ RL N + EDP+LW N A+ LMRERQ L +AI + Sbjct: 11 EIEKSLELLAQRMDYETALHRLEEFNARVEDPNLWDNPENAQKLMRERQMLVDAIETYES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L DN+ L+EL E+D ++Q+ D +Q+++ + K+ E+LL GEADSND +LE+ Sbjct: 71 IKTDLSDNIELIELGEMEEDGEVVQDAEDAIQKLRAKSAKKELEALLDGEADSNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTES DWA+ML RMY RWAEK+ + E GEEAGIKSA I G NAYGWL Sbjct: 131 NSGAGGTESCDWASMLARMYVRWAEKKGYTVELQSETAGEEAGIKSAAYKITGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSF S+WVYPVVDD+IEIE++ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFCSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PTG+VV E+SQH+N+ A L+++LY+ EL +R N Sbjct: 251 HVNTTDSAVRITHLPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQQELDRRNADINAAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRTN E + VLDGDLD FM ATLA+ Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTNHETSDTKGVLDGDLDGFMAATLAL 361 >gi|187924547|ref|YP_001896189.1| peptide chain release factor 2 [Burkholderia phytofirmans PsJN] gi|187715741|gb|ACD16965.1| peptide chain release factor 2 [Burkholderia phytofirmans PsJN] Length = 417 Score = 282 bits (720), Expect = 8e-74, Method: Composition-based stats. Identities = 180/344 (52%), Positives = 249/344 (72%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+D+ RL +N + EDP +W + A+ L RE++ LD+ + + + + L D Sbjct: 73 YGGIFDYDDKALRLIEVNRELEDPDVWNDSKHAQALGREKKLLDDTVGKLTSLDNDLRDA 132 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L ++A EEDD L + Q I+ V +F + + AD N+A+L++ AGAGGTE Sbjct: 133 QDLFDMAREEDDEETLLACESDAQGIEQRVADMEFRRMFANPADPNNAFLDIQAGAGGTE 192 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + DWA+MLLR Y R+ E++ FKTE LE DG+ AGIK+AT+ I+G AYG+L+ E GVHR Sbjct: 193 ACDWASMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHR 252 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS+ RHTSFSS++VYP +DDSIE++I+ +D RIDTYRASGAGGQH+N TDSA Sbjct: 253 LVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTDSA 312 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIP+G+VVQCQ +RSQH+N+A+A ML+++LYE E++KR+E + E+ KT++GWG Sbjct: 313 VRITHIPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQEEQDKLEAGKTDVGWG 372 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRTN+E ++ VLDGDLD F+ A+L Sbjct: 373 HQIRSYVLD-NSRIKDLRTNVEISNTKSVLDGDLDPFISASLKQ 415 >gi|325295572|ref|YP_004282086.1| hypothetical protein Dester_1396 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325066020|gb|ADY74027.1| hypothetical protein Dester_1396 [Desulfurobacterium thermolithotrophum DSM 11699] Length = 374 Score = 282 bits (720), Expect = 8e-74, Method: Composition-based stats. Identities = 177/353 (50%), Positives = 243/353 (68%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + + G FD + ++L+ + + + W + +A+ + ER +++ ++ Sbjct: 14 KVKDKYFEIRGYFDIEKMKKKLTEIEEEMSSANFWNDQKKAQSISMERNRIESELNTFSS 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ +L D LLE+A EE + S+L E L+ I+ E+ + +++LSGE D N+A + + Sbjct: 74 IEQQLEDIETLLEIAEEESEESLLDEAESFLKNIERELNSLEVKTVLSGEFDKNNAIVTI 133 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTES DWA ML+RMY RWAE++ F+TE L++ + EEAGIKSAT+LIKG AYG L Sbjct: 134 HAGAGGTESCDWAEMLMRMYLRWAERKGFETEILDLQENEEAGIKSATILIKGAYAYGLL 193 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E G HRLVRISP+DSN+RRHTSF + V P +D+ I+IEI + D RIDTYRASGAGGQ Sbjct: 194 RAEHGTHRLVRISPFDSNARRHTSFCGVIVVPEIDEDIDIEIKDEDLRIDTYRASGAGGQ 253 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVRITH+PTG+VV CQ ERSQ +N+ +A +L+A+LYELE QKREE Sbjct: 254 HVNKTDSAVRITHLPTGIVVTCQSERSQIQNRQRAMKILKARLYELERQKREEKIAEARG 313 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 I WG QIRSYV PYQMVKD RT IE ++ + V+DG++D F++ L K Sbjct: 314 EHKTIAWGNQIRSYVFHPYQMVKDHRTGIETSNINAVMDGEIDQFIEGFLKQK 366 >gi|319795017|ref|YP_004156657.1| hypothetical protein Varpa_4378 [Variovorax paradoxus EPS] gi|315597480|gb|ADU38546.1| hypothetical protein Varpa_4378 [Variovorax paradoxus EPS] Length = 367 Score = 282 bits (720), Expect = 9e-74, Method: Composition-based stats. Identities = 172/351 (49%), Positives = 245/351 (69%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + L D+D +RL +N EDP++W + +A+ L RE++ LD+ + + + Sbjct: 16 LSVRTVDLRRYLDYDAKAERLRTVNASLEDPNVWNDPKKAQELGREKKSLDDVVVTLDRL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L DN L E++ EE D LQ SD+ ++ +++ +F + + AD +A++++ Sbjct: 76 TNGLSDNSELFEMSKEEGDMDGLQSISDDAATLEADIKQLEFRRMFNNPADPLNAFVDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y ++AE++ FKT+ + G+ AGIK AT+ ++G A+G L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLKYAERKGFKTQIEDETPGDTAGIKGATIKVEGDYAFGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ RHTSF+SI+VYP +DDSIEI+I+ SD R DT+RASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASIFVYPEIDDSIEIDINPSDVRTDTFRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVR+THIPTG+VVQCQ RSQH N+ AW LR++LY+ E++KR+E E S Sbjct: 256 INKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDHEMRKRQEEQQKLEDS 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 316 KTDVGWGHQIRSYVLD-NSRIKDLRTNVEVSATQKVLDGDLDVFIEASLKQ 365 >gi|304391525|ref|ZP_07373467.1| peptide chain release factor 2 [Ahrensia sp. R2A130] gi|303295754|gb|EFL90112.1| peptide chain release factor 2 [Ahrensia sp. R2A130] Length = 374 Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats. Identities = 200/353 (56%), Positives = 263/353 (74%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++++ ++ L DW+ A RL LN +EDP LW + +A++LM+ERQ L+ I+ I Sbjct: 11 EITQAISLLRRHLDWEKANTRLEELNAASEDPDLWNDPGKAQLLMKERQQLETGITSING 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D L+ELA EDD +L E L+ + ++ +Q +LLSGEAD+ND Y EV Sbjct: 71 LEGDLGDTKDLIELAEMEDDADVLAEAESALRELHADLGKRQAATLLSGEADANDTYFEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H+GAGGTES DWANMLLRMY RWAE +K E G+EAGIK+AT+L+KG NAYG++ Sbjct: 131 HSGAGGTESNDWANMLLRMYIRWAETNGYKVEVQATTSGDEAGIKAATVLVKGANAYGYM 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS ++RHTSFSS+WVYPV+DD+IEI + +++ R+DT+R+SGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSQAKRHTSFSSVWVYPVIDDNIEIIVPDNEIRLDTFRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG+VV E+SQH+N+A A L+++LYE E+QKR E Sbjct: 251 HVNTTDSAVRITHIPTGIVVTSS-EKSQHQNRANAMKALKSRLYEAEMQKRNEATQAAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +K++IGWG QIRSYVLQPYQ+VKDLRT +E T+PS VLDGDL+ FM+A LA + Sbjct: 310 AKSDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPSAVLDGDLNAFMEAALAHQ 362 >gi|302383300|ref|YP_003819123.1| hypothetical protein Bresu_2190 [Brevundimonas subvibrioides ATCC 15264] gi|302193928|gb|ADL01500.1| conserved hypothetical protein [Brevundimonas subvibrioides ATCC 15264] Length = 373 Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats. Identities = 201/352 (57%), Positives = 254/352 (72%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + + L DWD A ++L LN + EDP LW + A+ + RER L I + E+ Sbjct: 12 IEQSVALLRRRLDWDVANRKLDELNARVEDPTLWNDPDAAQAVSRERSRLKTQIDTVLEM 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L + ++L ++A EE D + L+E L+ IK + E+LLSGEAD NDAYLEV+ Sbjct: 72 ESGLEEGVMLADMADEEGDEATLEEARAALKAIKDRASRAELEALLSGEADGNDAYLEVN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTES DWA MLLRMY+RWA+ ++ + DG++AGIKSAT+L+ GPNAYGWLK Sbjct: 132 SGAGGTESCDWAGMLLRMYSRWAKAHGYEVQIEASEDGDQAGIKSATILVTGPNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYD+ ++RHTSF+S+ V PVVDD+IEI+I+ +D R DTYRASG+GGQH Sbjct: 192 SESGVHRLVRISPYDAAAKRHTSFASVGVSPVVDDTIEIDINPADVRTDTYRASGSGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVR+THIPT VV CQ RSQH+N+ QAW MLR +LYELELQKRE A + Sbjct: 252 INKTDSAVRLTHIPTNTVVACQAGRSQHQNREQAWKMLRGRLYELELQKREAAAQALADA 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT+IGWG QIRSYVLQPYQMVKDLRT +E + VLDGDLD FM A LA + Sbjct: 312 KTDIGWGHQIRSYVLQPYQMVKDLRTEVETSDTQGVLDGDLDAFMGAALAAR 363 >gi|323143525|ref|ZP_08078205.1| peptide chain release factor 2 [Succinatimonas hippei YIT 12066] gi|322416719|gb|EFY07373.1| peptide chain release factor 2 [Succinatimonas hippei YIT 12066] Length = 347 Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats. Identities = 171/344 (49%), Positives = 235/344 (68%), Gaps = 1/344 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGG+FD++ +RL +N EDP +W + +A+ L +ERQ L + +S ++ D Sbjct: 2 LLGGIFDFETKKERLEEVNGLLEDPQVWNDPEKAQQLGKERQVLSSVVSRFDKLYSGFDD 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 L+L EL EE D ++E +++ + +FE + S D++D Y+++ +G+GGT Sbjct: 62 VLMLFELGSEEGDEDSIKEAYSEADKLEEVLNALEFERMFSKPNDNSDCYMDIQSGSGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDWA M++RMY ++ EK F +E +GE AGIKSATL GP A+GWL+ E G+H Sbjct: 122 EAQDWAEMVMRMYLKFGEKHGFDCTVIECSEGEVAGIKSATLKFAGPYAFGWLRTETGIH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DSN+RRHTSF S +VYP +D+ I++EI+ +D +ID +R+SGAGGQHVN T+S Sbjct: 182 RLVRKSPFDSNNRRHTSFCSAFVYPEIDNDIKVEINPADLKIDVFRSSGAGGQHVNKTES 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITHIPTGVVV CQ ERSQ +N+ QA LRAKLYELEL+K++ E SK +IGW Sbjct: 242 AVRITHIPTGVVVSCQNERSQFQNRDQAMKQLRAKLYELELRKQQSEQQAIEDSKADIGW 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G QIRSYVL VKDLRT +E VL+GDLD F++A+L Sbjct: 302 GSQIRSYVLDD-ARVKDLRTQVECRDTQRVLNGDLDQFIEASLK 344 >gi|260433401|ref|ZP_05787372.1| peptide chain release factor 2 [Silicibacter lacuscaerulensis ITI-1157] gi|260417229|gb|EEX10488.1| peptide chain release factor 2 [Silicibacter lacuscaerulensis ITI-1157] Length = 375 Score = 281 bits (719), Expect = 9e-74, Method: Composition-based stats. Identities = 198/352 (56%), Positives = 253/352 (71%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L L D++ A RL N + EDP+LW N A+ LMRERQ L +AI + Sbjct: 11 EIQKSLELLAQRMDYETAAHRLEEFNARVEDPNLWDNPENAQKLMRERQVLVDAIETYES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L DN+ L+EL E D ++++ + L++++ + K+ E+LL GEAD+ND +LE+ Sbjct: 71 IKTDLKDNVELIELGEMEGDEEVVKDAEEALKKLRDKAAEKELEALLDGEADANDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA+ML RMY RWAEK+ +K E GEEAGIKSA I G NAYGWL Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKKGYKVELQSETPGEEAGIKSAAYKISGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS ++RHTSFSS+WVYPVVDD+IEIE++ +D R+DTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPYDSAAKRHTSFSSVWVYPVVDDNIEIEVNPADIRVDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG+VV E+SQH+N+ A L+++LY++EL +R N Sbjct: 251 HVNTTDSAVRITHIPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAEINAAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRT E + VLDGDL FM ATLA+ Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTGYETSDTKGVLDGDLGGFMAATLAM 361 >gi|315121916|ref|YP_004062405.1| peptide chain release factor 2 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495318|gb|ADR51917.1| peptide chain release factor 2 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 354 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 296/349 (84%), Positives = 329/349 (94%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 +NCLGGLFDWDNA++RL FLN K E+P+LW+ V EAK+LMRERQHLDNA+S +K +QDRL Sbjct: 1 MNCLGGLFDWDNALKRLHFLNDKAENPNLWEKVEEAKILMRERQHLDNAVSSLKALQDRL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 DN+ LL+LA+EE++ S+LQE+ DNL+++KL+ EYKQFESL SGEADSND YLEVHAGAG Sbjct: 61 DDNIALLDLAVEENNSSVLQESLDNLKQLKLDTEYKQFESLFSGEADSNDVYLEVHAGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTESQDWANML+RMY RW+E+RKFK + LE+HDGEEAGIKSATLLIKGPNAYGWLK EQG Sbjct: 121 GTESQDWANMLVRMYIRWSERRKFKIDLLEVHDGEEAGIKSATLLIKGPNAYGWLKEEQG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISPYDSNSRRHTSFSS+WVYPVVD+SIEIEI+ESDCRIDTYRASGAGGQHVNTT Sbjct: 181 VHRLVRISPYDSNSRRHTSFSSVWVYPVVDESIEIEINESDCRIDTYRASGAGGQHVNTT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY+LELQKREEIANIGESSKTEI Sbjct: 241 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYDLELQKREEIANIGESSKTEI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 GWGRQIRSYVLQPYQMVKDLRTNIEK+SP DVL+GDLDDFMKA LA+KK Sbjct: 301 GWGRQIRSYVLQPYQMVKDLRTNIEKSSPLDVLNGDLDDFMKAALALKK 349 >gi|253752128|ref|YP_003025269.1| peptide chain release factor 2 [Streptococcus suis SC84] gi|253753953|ref|YP_003027094.1| peptide chain release factor 2 [Streptococcus suis P1/7] gi|253755172|ref|YP_003028312.1| peptide chain release factor 2 [Streptococcus suis BM407] gi|251816417|emb|CAZ52048.1| peptide chain release factor 2 [Streptococcus suis SC84] gi|251817636|emb|CAZ55384.1| peptide chain release factor 2 [Streptococcus suis BM407] gi|251820199|emb|CAR46580.1| peptide chain release factor 2 [Streptococcus suis P1/7] Length = 364 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 154/353 (43%), Positives = 215/353 (60%), Gaps = 2/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++L G D + + ++ L K +P W + + A+ +E L N + Sbjct: 12 ELGKKLTSFRGSLDLEGLEEEIAILENKMTEPDFWNDNLAAQKTSQELNELKNTYGNFHQ 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D ++ ILL+ +D S+ E + L + + + LLS D N+A LE+ Sbjct: 72 MLDLYDESEILLDF--LAEDESVRDELVEKLVELDKTMTAYEMTLLLSEPYDHNNAILEI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H G+GGTE+QDW MLLRMY R+ + F E L+ G+EAGIKS TL GPNAYG L Sbjct: 130 HPGSGGTEAQDWGEMLLRMYQRYGNAKGFIVETLDYQAGDEAGIKSVTLSFTGPNAYGLL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS RRHTSF+S+ V P +DD+IEIEI + + ++DT+R+ GAGGQ Sbjct: 190 KSEMGVHRLVRISPFDSAKRRHTSFTSVEVMPELDDTIEIEIRDDEVKMDTFRSGGAGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN + VR+THIPTG+V Q +R+Q+ N+ +A +L+AKLY+LE +K+ + + Sbjct: 250 NVNKVSTGVRLTHIPTGIVTQSTVDRTQYGNRDRAMKLLQAKLYQLEQEKKAAEVDSLKG 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K EI WG QIRSYV PY MVKD RT E V+DGDLD F+ A L + Sbjct: 310 DKKEITWGSQIRSYVFTPYTMVKDHRTGYEVAQVDKVMDGDLDGFIDAYLKWR 362 >gi|163783151|ref|ZP_02178145.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1] gi|159881485|gb|EDP74995.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1] Length = 367 Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 162/353 (45%), Positives = 239/353 (67%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + + D D + L ++ W + +AK ++++R+ L+ ++ I+ Sbjct: 10 ELKERFEGIRKVLDIDRLKEELRKMDETMSAQGFWDDQEKAKKVIQKRKWLEETVNSIET 69 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D L + E+D + ++ ++ +++ + ++ LSGE DS +AYL + Sbjct: 70 LEKSLRDVEELSQ-TTPEEDTDTWAILEEEMESLEDKLKELELKTYLSGEMDSKNAYLTI 128 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGGTE+ DWA+ML RMY RWAE++ + E ++I + AGIKS TLL+KGP AYG+L Sbjct: 129 QAGAGGTEACDWADMLYRMYRRWAERKGYDVEVVDITPDDVAGIKSVTLLVKGPYAYGYL 188 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 +GEQGVHRLVRISP+DSN+RRHTSF+++ V P +D+ I IE+ + D +I+T+RASGAGGQ Sbjct: 189 RGEQGVHRLVRISPFDSNARRHTSFAAVSVMPQIDEDINIEVRDEDLKIETFRASGAGGQ 248 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN TD+AVR+THIPTG+VV CQQERSQ +N+ +A +L+AKLY+LE QK E E Sbjct: 249 YVNKTDTAVRLTHIPTGIVVSCQQERSQFQNRRKALELLKAKLYQLEQQKLMEKRKQYEG 308 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT+IGWG QIRSYV PY++VKDLRT E + V+DGD+D F++ L + Sbjct: 309 EKTDIGWGHQIRSYVFHPYRLVKDLRTGYETGNVDAVMDGDIDQFIEGFLKWQ 361 >gi|167767702|ref|ZP_02439755.1| hypothetical protein CLOSS21_02237 [Clostridium sp. SS2/1] gi|167710441|gb|EDS21020.1| hypothetical protein CLOSS21_02237 [Clostridium sp. SS2/1] gi|291558928|emb|CBL37728.1| bacterial peptide chain release factor 2 (bRF-2) [butyrate-producing bacterium SSC/2] Length = 373 Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 177/351 (50%), Positives = 235/351 (66%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 L L G + +R+ L E+P W NV E++ +M+E + L + +++ Sbjct: 15 QEPLEDLSGSLALEAKKERIDQLELNMEEPGFWDNVEESQNVMKEVKSLKGVVEEYDDLK 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D L+++A E++D +++E + + + E + +LL+GE D +DA L +HA Sbjct: 75 TKYEDIETLIDMAEEDEDADLIEEATALMDEFEKTYEELRISTLLTGEYDKDDAILTLHA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTES DWA ML RM+TRWA K+ + TE L+ DG+EAGIKS T+ I G NAYG+L+ Sbjct: 135 GAGGTESCDWAGMLYRMFTRWAGKKGYGTEVLDYLDGDEAGIKSVTVKITGMNAYGYLRS 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+++ +R TSF+S V P + D IE+EI++ D RIDTYRASGAGGQH+ Sbjct: 195 EKGVHRLVRISPFNAAGKRQTSFASCDVMPDIKDDIEVEIADEDIRIDTYRASGAGGQHI 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N TDSA+RITH+PTG+VVQCQ ERSQHKNK QA ML+ KLY L+ Q+ E + Sbjct: 255 NKTDSAIRITHLPTGIVVQCQNERSQHKNKDQAMKMLKTKLYLLKQQQHLEKLSDIRGDV 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + GWG QIRSYVLQPY MVKD RTN E +PS VLDGDLD FM A LA Sbjct: 315 GDNGWGNQIRSYVLQPYTMVKDHRTNFESGNPSAVLDGDLDGFMNAYLAWD 365 >gi|326204357|ref|ZP_08194215.1| peptide chain release factor 2 [Clostridium papyrosolvens DSM 2782] gi|325985389|gb|EGD46227.1| peptide chain release factor 2 [Clostridium papyrosolvens DSM 2782] Length = 373 Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 172/353 (48%), Positives = 237/353 (67%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + D + ++ L K +P W ++ ++ ++++ + L I I Sbjct: 14 LKSNLEEMRASLDIASISDEIAELEHKASEPEFWNDMENSQKILQKTKILKTKIDRFNNI 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L EL LEE D S++ E + LQ +K +E + E+LL+G D N+A L +H Sbjct: 74 TSQWEDLFTLSELGLEEQDESVIPEVGEGLQLLKHNLEALRLETLLTGPYDKNNAILTLH 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDW MLLRM+TRW E + ++ + L+ DG+EAGIKS T+ + G NAYG+LK Sbjct: 134 AGAGGTEAQDWVQMLLRMFTRWGEAKGYEVKILDYLDGDEAGIKSVTIHVIGENAYGYLK 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS+ RRHTSF+S V P +DD+IEI I+ D R+DTYRASGAGGQH Sbjct: 194 SEKGVHRLVRISPFDSSGRRHTSFASADVMPELDDTIEININPDDLRVDTYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSA+RITHIPTGVVV CQ ERSQ +NK A ML+AKL+EL+ ++++E + Sbjct: 254 INKTDSAIRITHIPTGVVVSCQTERSQFQNKDTAMKMLKAKLFELKEREQKEKIEDLKGV 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + EI WG QIRSYV PY +VKD RTN E+ + V+DG+LD F+ A L+++K Sbjct: 314 QMEIAWGSQIRSYVFCPYTLVKDHRTNYEEGNVDAVMDGELDGFINAYLSMEK 366 >gi|319943696|ref|ZP_08017977.1| peptide chain release factor RF2 [Lautropia mirabilis ATCC 51599] gi|319742929|gb|EFV95335.1| peptide chain release factor RF2 [Lautropia mirabilis ATCC 51599] Length = 359 Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 178/343 (51%), Positives = 239/343 (69%), Gaps = 1/343 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D RL+ +N+ E P +W + A L +E++ LDN + I+++ L D Sbjct: 16 GGIFDFDEKKNRLTEVNSALEAPDIWNDAAAALELGKEKRALDNVVGTIEQLTGSLSDTR 75 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L E+A+ E+D + L+E I+ VE +F + S AD +LE+ AGAGGTE+ Sbjct: 76 DLYEMAVAENDDATLEELERESLGIEKGVEGLEFRRMFSNPADPGPCFLEIQAGAGGTEA 135 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA MLLR Y R+ E+R F T LE +G+ AGIK ATL ++G AYG+L+ E G+HRL Sbjct: 136 CDWAAMLLRQYLRYCERRGFTTTLLEESEGDVAGIKGATLKVEGEYAYGYLRTETGIHRL 195 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS+ RHTSF+S++VYP VDDSIE++I+ +D RID YRASGAGGQHVN T+SAV Sbjct: 196 VRKSPFDSSGGRHTSFASVYVYPEVDDSIEVDINPADLRIDVYRASGAGGQHVNKTESAV 255 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH+PT VVQCQ +RSQH+N+ +A MLRA+L+ELEL+KR+ + E+SKT+IGWG Sbjct: 256 RITHLPTNTVVQCQNDRSQHRNRDEAMKMLRARLFELELRKRQAEQDKVEASKTDIGWGH 315 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRTN E ++ VLDGDLDDF+ +L Sbjct: 316 QIRSYVLD-QSRIKDLRTNFETSNTKAVLDGDLDDFIAESLKQ 357 >gi|260587039|ref|ZP_05852952.1| peptide chain release factor 2 [Blautia hansenii DSM 20583] gi|331082810|ref|ZP_08331932.1| peptide chain release factor 2 [Lachnospiraceae bacterium 6_1_63FAA] gi|260542529|gb|EEX23098.1| peptide chain release factor 2 [Blautia hansenii DSM 20583] gi|330400139|gb|EGG79788.1| peptide chain release factor 2 [Lachnospiraceae bacterium 6_1_63FAA] Length = 372 Score = 281 bits (718), Expect = 1e-73, Method: Composition-based stats. Identities = 163/350 (46%), Positives = 237/350 (67%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + L + D +N +R+ L + E P W N ++ +M+E L + ++Q Sbjct: 15 TEPLKEVRDSLDLENKEKRVEELEREMEAPGFWDNAERSQKMMKELSALKGDMEIYHKLQ 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 ++ + +++E+ EE+D SI+ + + L + E+ + ++LLSGE D ++A + +HA Sbjct: 75 NQKEEIELMIEMGYEENDPSIVPDIQEMLDEFIQDFEHIRIKTLLSGEYDKDNAIVTLHA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTES DWA+ML RMY RWA+++ F TE L+ DG+EAGIKS T + G NAYG+LK Sbjct: 135 GAGGTESCDWASMLYRMYLRWADRQGFSTEVLDYLDGDEAGIKSVTFQVNGENAYGYLKS 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+++ +R TSF S V P +++ +++EI+ D RIDTYR+SGAGGQH+ Sbjct: 195 EKGVHRLVRISPFNAAGKRQTSFVSCDVMPDIEEDVDVEINPDDLRIDTYRSSGAGGQHI 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SA+RITH+PTG+VVQCQ ERSQ +NK +A ML+AKLY L+ Q+ E+ + + Sbjct: 255 NKTSSAIRITHLPTGIVVQCQNERSQFQNKDKAMQMLKAKLYLLKQQENEKKLSGIQGEL 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 TEIGWG QIRSYV+QPY MVKD RTN E + V++G++D+F+ A L Sbjct: 315 TEIGWGNQIRSYVMQPYTMVKDHRTNEETGNVDAVMNGNIDNFINAYLKW 364 >gi|294142345|ref|YP_003558323.1| peptide chain release factor 2 [Shewanella violacea DSS12] gi|293328814|dbj|BAJ03545.1| peptide chain release factor 2 [Shewanella violacea DSS12] Length = 352 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 168/350 (48%), Positives = 234/350 (66%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + L GG FD+D +RL ++ + E+ +W + A+ L +ER L+ + I ++ Sbjct: 1 MQNVLLAFGGFFDYDAKKERLEEVSRELENSDVWNDPDNAQALGKERAALELIVKTIDDM 60 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LL+LA+EE D + S L ++ +E +F + SG D ++YL++ Sbjct: 61 DTGLEDVEGLLDLAIEEGDEDTFNDASAELDDLEKRLEDLEFRRMFSGPHDIANSYLDIQ 120 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +G+GGTE+QDWANM+LRMY RW E +K E +E+ G+ AGIK AT+ G A+G L+ Sbjct: 121 SGSGGTEAQDWANMVLRMYLRWGEAHDYKPELIEVTAGDVAGIKGATIKFNGEYAFGSLR 180 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQH Sbjct: 181 TETGVHRLVRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQH 240 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T+SA+RITH+PT VVQCQ +RSQHKN+ A L+AKL+ELE+ K+ + E + Sbjct: 241 INKTESAIRITHVPTNTVVQCQNDRSQHKNRDAAMKQLKAKLFELEMLKQNQEKQAAEDA 300 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 301 KSDIGWGSQIRSYVLDD-ARIKDLRTGVESRNTQTVLDGGLDMFIQASLK 349 >gi|295676932|ref|YP_003605456.1| hypothetical protein BC1002_1882 [Burkholderia sp. CCGE1002] gi|295436775|gb|ADG15945.1| conserved hypothetical protein [Burkholderia sp. CCGE1002] Length = 367 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 176/351 (50%), Positives = 249/351 (70%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + L G D+D+ RL +N + EDP +W + A+ L +E++ LD+ + + I Sbjct: 16 LRKRADDLRGYLDYDDKALRLIEVNRELEDPDVWNDAKHAQALGKEKKLLDDTVGKLTSI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + D L ++A EE D L + Q I+ V +F + + AD N+A+L++ Sbjct: 76 TNDVNDAQDLFDMAREEADDETLLACEADAQAIEARVADMEFRRMFANPADPNNAFLDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y R+ E++ FKTE LE +G+ AGIK+AT+ I+G AYG+L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKTEVLEQTEGDVAGIKNATIKIEGEYAYGFLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH+P+G+VVQCQ +RSQH+N+A+A ML+++LYE E++KR+ + E+ Sbjct: 256 INKTDSAVRITHMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F+ A+L Sbjct: 316 KTDVGWGHQIRSYVLD-NSRIKDLRTNVEISNTKSVLDGDLDPFISASLKQ 365 >gi|297544050|ref|YP_003676352.1| hypothetical protein Tmath_0587 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841825|gb|ADH60341.1| hypothetical protein Tmath_0587 [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 368 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 168/353 (47%), Positives = 234/353 (66%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ ++ +G D + + + ++ + DP W ++ +++ L + ++ L + Sbjct: 11 KMFEEIKEMGVSLDIEGVKREIEEIDKEMADPDFWNDIKKSQELAKRQKELKELLEEYNS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D L+EL LEE D SI +E + +K ++E + ++LL+G D N+A L + Sbjct: 71 LVRKWEDLTTLIELGLEEGDESITEEVDKEYKELKKKLEDLKIKTLLNGPYDKNNAILSI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAG+GGTE+QDWA MLLRMYTRWA + F E L+ GEEAGIKS TL+IKGP AYG+L Sbjct: 131 HAGSGGTEAQDWAEMLLRMYTRWANDKGFDVETLDYLQGEEAGIKSVTLMIKGPFAYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+ RRHTSF+ + V P ++D IE+EI D RIDTYRASGAGGQ Sbjct: 191 KSEAGVHRLVRISPFDAAGRRHTSFALVEVLPELEDDIEVEIRPEDLRIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN T+SAVRITH+PTG+VV CQ ERSQ +N+ A ML+AKL +L +++++E + Sbjct: 251 YVNKTESAVRITHLPTGIVVSCQNERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 E WG QIRSYV QPY +VKD RTN E + V+DG++DDF+ A L K Sbjct: 311 EHKEAAWGNQIRSYVFQPYTLVKDHRTNFEVGNVQAVMDGEIDDFINAYLKQK 363 >gi|67461211|sp|Q8Y4D8|RF2_LISMO RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 366 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 173/351 (49%), Positives = 228/351 (64%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 ++Q+ G D D+ R++ L + DP+ W + A+ ++ E ++ Sbjct: 14 AQQIKDFRGSLDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALE 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + I LEL EE D + +E +++ + + + +LS D N+A LE+H Sbjct: 74 EEQESMEISLELLKEEADEDLQEELEKDIKAYMATISAFELKLMLSDPYDKNNAILELHP 133 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTESQDW +MLLRMY RW+EK+ FK E L+ G+EAGIKS TLLIKG NAYG+LK Sbjct: 134 GAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKA 193 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+DS+ RRHTSF S+ V P +D IEIE+ D +IDTYRA+GAGGQH+ Sbjct: 194 EKGVHRLVRISPFDSSGRRHTSFVSVDVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHI 253 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSAVR+THIP+G+VV CQ ERSQ KN+ QA ML+ KLY+ E +++E + Sbjct: 254 NTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQ 313 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 EIGWG QIRSYV PY MVKD RTN E + V+DGDLDDF+ A L + Sbjct: 314 KEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 364 >gi|170017955|ref|YP_001728874.1| peptide chain release factor 2 [Leuconostoc citreum KM20] gi|238688939|sp|B1MW26|RF2_LEUCK RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|169804812|gb|ACA83430.1| Peptide chain release factor 2 [Leuconostoc citreum KM20] Length = 372 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 151/353 (42%), Positives = 220/353 (62%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + G D + + ++ + +P W + +A+ ++ E L N + Sbjct: 13 IQENIARFQGTLDLEALTEEIADFENRMTEPGFWDDNTKAQKVIEENNVLKNRRDSFLNL 72 Query: 63 QDRLCDNLILLEL-ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ + +L+++ A + D E +D++ + + +VE E LL+ D+N+A LEV Sbjct: 73 TNQAEEIEVLIDMLAEDPGDVDTATELADSIAQAQKDVEAYNLEQLLTEPYDANNAILEV 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H G+GGTES DW L RMYTRWA++ F+ + L+ H G+EAGI SAT+ I G NA+G+L Sbjct: 133 HPGSGGTESTDWGANLYRMYTRWAQQHGFQVDVLDYHAGDEAGIDSATIKITGHNAFGFL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E+GVHR VRISP+DS RRHTSF S+ V P +DD+IE+E+ + D ++D +R+ GAGGQ Sbjct: 193 RSEKGVHRFVRISPFDSAGRRHTSFVSVDVMPELDDTIEVEVRDDDIKMDVFRSGGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN + VR+TH PTG+VV ER+Q+ N+ A +L++KLY+LEL+K+E Sbjct: 253 NVNKVSTGVRLTHEPTGIVVSSTVERTQYGNRDYAMKLLKSKLYQLELEKQEAERAALTG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K E GWG QIRSYVL PYQMVKD RTN E P VLDGDLD F+ A L + Sbjct: 313 EKMENGWGSQIRSYVLHPYQMVKDHRTNYETNQPQQVLDGDLDPFINAYLQWQ 365 >gi|49483011|ref|YP_040235.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus MRSA252] gi|56749421|sp|Q6GIN7|RF2_STAAR RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|49241140|emb|CAG39818.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus MRSA252] Length = 369 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 163/353 (46%), Positives = 225/353 (63%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K ++ L + G D +N + +P+ W N +A+ ++ + L ++ K Sbjct: 12 KYNQDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKT 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +Q + D +L EE D + ++ + K +V+ + + LL G D+N+A LE+ Sbjct: 72 LQAEVDDMDATWDLLQEEFDGEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILEL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWANML RMY R+ EK+ FK + ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 132 HPGAGGTESQDWANMLFRMYQRYCEKKGFKVKTVDYLPGDEAGIKSVTLLIKGHNAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGG 240 K E+GVHRLVRISP+DS+ RRHTSF+S V P +D IEIEI+ D +DT+RASGAGG Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QH+N T+SA+RITH P+G+VV Q ERSQ KN+ A ML++KLY+L+L+++ Sbjct: 252 QHINKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIR 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + EIGWG QIRSYV PY MVKD RTN E V+DGD+ F+++ L Sbjct: 312 GEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLRQ 364 >gi|67461212|sp|Q927Y4|RF2_LISIN RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 366 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 174/351 (49%), Positives = 228/351 (64%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 ++Q+ G D D+ R++ L + DP+ W + A+ ++ E ++ Sbjct: 14 AQQIKDFRGSLDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALE 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + I LEL EE D + E +++ + + + +LS D N+A LE+H Sbjct: 74 EEQESMEISLELLKEEADEDLQAELEKDIKAYVATISEFELKLMLSDPYDKNNAILELHP 133 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTESQDW +MLLRMY RW+EK+ FK E L+ G+EAGIKS TLLIKG NAYG+LK Sbjct: 134 GAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKA 193 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+DS+ RRHTSF S+ V P +DD IEIE+ D +IDTYRA+GAGGQH+ Sbjct: 194 EKGVHRLVRISPFDSSGRRHTSFVSVDVMPELDDEIEIEVRTEDLKIDTYRATGAGGQHI 253 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSAVR+THIP+G+VV CQ ERSQ KN+ QA ML+ KLY+ E +++E + Sbjct: 254 NTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQ 313 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 EIGWG QIRSYV PY MVKD RTN E + V+DGDLDDF+ A L + Sbjct: 314 KEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 364 >gi|289577756|ref|YP_003476383.1| hypothetical protein Thit_0519 [Thermoanaerobacter italicus Ab9] gi|289527469|gb|ADD01821.1| hypothetical protein Thit_0519 [Thermoanaerobacter italicus Ab9] Length = 368 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 169/353 (47%), Positives = 234/353 (66%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ ++ +G D + + + ++ K DP W ++ +++ L + ++ L + Sbjct: 11 KMFEEIKEMGVSLDIEGVKREVEEIDKKMADPDFWNDIKKSQELAKRQKELKELLEEYNS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D L+EL LEE D SI +E + +K ++E + ++LL+G D N+A L + Sbjct: 71 LVRKWEDLTTLIELGLEEGDESITEEVDKEYKELKKKLEDLKIKTLLNGPYDKNNAILSI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAG+GGTE+QDWA MLLRMYTRWA + F E L+ GEEAGIKS TL+IKGP AYG+L Sbjct: 131 HAGSGGTEAQDWAEMLLRMYTRWANDKGFDVETLDYLQGEEAGIKSVTLMIKGPFAYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+ RRHTSF+ + V P ++D IE+EI D RIDTYRASGAGGQ Sbjct: 191 KSEAGVHRLVRISPFDAAGRRHTSFALVEVLPELEDDIEVEIRPEDLRIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN T+SAVRITH+PTG+VV CQ ERSQ +N+ A ML+AKL +L +++++E + Sbjct: 251 YVNKTESAVRITHLPTGIVVSCQNERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 E WG QIRSYV QPY +VKD RTN E + V+DG++DDF+ A L K Sbjct: 311 EHKEAAWGNQIRSYVFQPYTLVKDHRTNFEVGNVQAVMDGEIDDFINAYLKQK 363 >gi|225847994|ref|YP_002728157.1| peptide chain release factor 2 [Sulfurihydrogenibium azorense Az-Fu1] gi|225644274|gb|ACN99324.1| peptide chain release factor 2 [Sulfurihydrogenibium azorense Az-Fu1] Length = 370 Score = 280 bits (716), Expect = 2e-73, Method: Composition-based stats. Identities = 174/353 (49%), Positives = 241/353 (68%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + N L + + + + L+++ DP+ W + +A+ + +R +L + I + Sbjct: 12 EIIEKWNNLKDILKPEKLQEEIKVLDSQMADPNFWNDPKKAQEISSKRNYLGEKLEEILK 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I ++ D ++L E D S+ E + ++ E+E + SLLS E DS +A L + Sbjct: 72 IDKKVKDLQDYIQLLEMEKDESLYTEVEKEINHLEKELERLEISSLLSDEMDSKNAILTL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GG E+ DW ML+RMY RWAE + F+ E ++ + AGIKSAT++IKGP AYG+L Sbjct: 132 QAGSGGVEACDWTQMLMRMYLRWAEGKGFQVEIVDYQPDDVAGIKSATIIIKGPFAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGEQGVHRLVRISP+D+N RRHTSF+++ V P +D+ I++EI+E D RIDT+RASGAGGQ Sbjct: 192 KGEQGVHRLVRISPFDANKRRHTSFAAVSVIPEIDEEIKVEINEEDLRIDTFRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVRITHIPTG+VV CQ ERSQ +NK +A NML+AKLY+LELQK++E E Sbjct: 252 HVNKTDSAVRITHIPTGIVVACQSERSQLQNKLKALNMLKAKLYQLELQKQKEKQKELEG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K +I WG QIRSYV QPYQMVKDLRT E + V+DGD+D F+++ L K Sbjct: 312 EKKDITWGNQIRSYVFQPYQMVKDLRTGYEVGNVEAVMDGDIDGFIESYLKWK 364 >gi|292492472|ref|YP_003527911.1| hypothetical protein Nhal_2436 [Nitrosococcus halophilus Nc4] gi|291581067|gb|ADE15524.1| hypothetical protein Nhal_2436 [Nitrosococcus halophilus Nc4] Length = 365 Score = 280 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 180/350 (51%), Positives = 238/350 (68%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L L G D+ +RL + + P +W A+ L +ER L + + + Sbjct: 14 LKGRLEALRGYLDFAAKQERLVEVERELAIPSVWNEPERAQRLGQERAQLQAVVGPLAAL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + L ELA+EE D +E S L+ ++ +E +F+ + +GE D N+AYL++ Sbjct: 74 GEEIGQIKELFELAVEEGDEDTAREVSAELETMEQRLEKLEFQRMFAGEMDPNNAYLDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWANMLLRMY RW EK FKTE E+ GE AGIKSAT+ +G A+GWL+ Sbjct: 134 AGSGGTEAQDWANMLLRMYLRWGEKHGFKTELTEVSAGEVAGIKSATIRFEGEYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSF+S++VYP VD+ I+IEI+ +D RIDTYRA+GAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGNRRHTSFASVFVYPEVDERIDIEINPADLRIDTYRAAGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSAVRITH+P+ +VVQCQ ERSQH+NKA LRAKLYELE++KR+ E + Sbjct: 254 VNRTDSAVRITHLPSNIVVQCQSERSQHQNKAHGMAQLRAKLYELEMRKRQAEKQAAEEA 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K +IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KADIGWGSQIRSYVLD-QSRIKDLRTGVEMGNTQAVLDGDLDLFIEASLK 362 >gi|269797862|ref|YP_003311762.1| peptide chain release factor 2 [Veillonella parvula DSM 2008] gi|269094491|gb|ACZ24482.1| bacterial peptide chain release factor 2 (bRF- 2) [Veillonella parvula DSM 2008] Length = 368 Score = 280 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 171/352 (48%), Positives = 244/352 (69%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ +G F+ R+ L+ + DP W N +A+ + +E L NA+ K++ Sbjct: 12 LEERIYGMGIHFNIAQKEDRIFTLDVQMSDPTFWDNPDKAREISQEATQLKNAVESYKQL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D ++LE+A++EDD S+ E + +++I+ +E ++ LLSGE D+N+A L H Sbjct: 72 VSDIEDANVMLEMAIDEDDLSMESEIKEYVKQIEETLEKQEVLLLLSGEYDANNAILTFH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDW +ML+RMY RWAEK F E ++ G+EAGIKSAT L+KG NA+G+LK Sbjct: 132 AGAGGTEAQDWCSMLIRMYLRWAEKSGFSIELMDEQPGDEAGIKSATFLVKGENAFGYLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+D+ +RRHTSF+++ V P +DD++EI I D ++DTYRASGAGGQH Sbjct: 192 SEKGVHRLVRISPFDAAARRHTSFAAVDVMPEIDDTVEINIDMKDVQVDTYRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVR+TH PTG+VVQCQ +RSQ +N+ QA +LRAKL+ELEL+K+ E+ + Sbjct: 252 INKTDSAVRMTHKPTGIVVQCQTQRSQMQNREQALRLLRAKLFELELEKQAELKEQIGGT 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 I WG QIRSYV PY +VKD RT++E + V+DG+LD F++ L + Sbjct: 312 YQAIEWGSQIRSYVFHPYNLVKDHRTSVETGNVQAVMDGNLDPFIEGFLKKE 363 >gi|229541533|ref|ZP_04430593.1| peptide chain release factor 2 [Bacillus coagulans 36D1] gi|229325953|gb|EEN91628.1| peptide chain release factor 2 [Bacillus coagulans 36D1] Length = 327 Score = 280 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 166/324 (51%), Positives = 224/324 (69%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P+ W + EA+ ++ E L ++ +E++ + D + ELA EE+D + +E Sbjct: 1 MLEPNFWDDQQEAQKIINESNALKEMVNGYRELESQQEDLEVTHELAKEENDSELKEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L+ ++ + + LL+G D+N+A LE+H GAGGTESQDW +MLLRMYTRW EK+ Sbjct: 61 AELEAFTEKLNEYELQLLLNGPYDANNAILELHPGAGGTESQDWCSMLLRMYTRWGEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAG+KS TLL KG NAYG+LK E+G+HRLVRISP+D+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGVKSVTLLFKGHNAYGYLKAEKGIHRLVRISPFDAAGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+E+ D R+DTYRASGAGGQH+N T SAVRITHIPTG+VV CQ ERSQ Sbjct: 181 EVMPEIDDNIEVEVRPEDLRVDTYRASGAGGQHINKTSSAVRITHIPTGIVVSCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ QA ML+AKLY+ E++++E+ + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 IQNREQAMKMLKAKLYQKEVEEKEKQLAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 +E + V+DG++D F+ A L Sbjct: 301 VETGNVQAVMDGEIDPFIDAYLRA 324 >gi|297539161|ref|YP_003674930.1| peptide chain release factor 2 [Methylotenera sp. 301] gi|297258508|gb|ADI30353.1| peptide chain release factor 2 [Methylotenera sp. 301] Length = 351 Score = 280 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 174/346 (50%), Positives = 241/346 (69%), Gaps = 1/346 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 LGG+FD++ QRL +N EDP +W + +++ L +E++ L+ + ++ ++ L Sbjct: 5 TTLGGIFDFETKSQRLEEVNGLLEDPKVWDDNKKSQALGKEKRALELVVHSLQAVESSLN 64 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D+ L E+A EE+D L + Q ++ +V +F + SGE DSN+ ++E +G+GG Sbjct: 65 DSRELFEMAREENDDDTLLSVDVDSQAVEKQVAEMEFRRMFSGELDSNNCFIEFQSGSGG 124 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDWA MLLRMY R+ E++ FK E LE DG+ AGIK A++ + G AYG L+ E GV Sbjct: 125 TEAQDWAAMLLRMYLRYCERKGFKVEVLEESDGDVAGIKGASIKVTGDYAYGTLRTENGV 184 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DSN++RHTSF+S+ ++P VDDSI+I+I+ +D RIDTYRASGAGGQH+N TD Sbjct: 185 HRLVRKSPFDSNAKRHTSFASVQIFPEVDDSIQIDINPADLRIDTYRASGAGGQHINKTD 244 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PT VVQCQ +RSQH+N+ +A NML+ LY LEL KR E +KT+IG Sbjct: 245 SAVRITHLPTNTVVQCQNDRSQHRNRDEAMNMLKGALYNLELNKRNADKQALEDAKTDIG 304 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYVL +KDLRTN+E + VLDGDLD F++ +L Sbjct: 305 WGHQIRSYVLD-QGRIKDLRTNVEIGNTQGVLDGDLDPFIQVSLKQ 349 >gi|254487153|ref|ZP_05100358.1| peptide chain release factor 2 [Roseobacter sp. GAI101] gi|214044022|gb|EEB84660.1| peptide chain release factor 2 [Roseobacter sp. GAI101] Length = 374 Score = 280 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 196/352 (55%), Positives = 250/352 (71%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++S+ L L + + A RL N + EDP+LW + A+ LMRERQ L ++I+ + Sbjct: 11 QISKSLELLAQRLNVETAPYRLEEFNARVEDPNLWDDPDAAQKLMRERQALVDSIATYEG 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L D++ L+E+ E+D ++ E L+ + K+ E+LL GEADSND +LE+ Sbjct: 71 IKQELADHVELIEMGEMENDAEVVAEAEAALKALAETAAQKELEALLDGEADSNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWAN+L RMY RWAEK+ +K E GEEAGIKSAT I G NAYGWL Sbjct: 131 NAGAGGTESCDWANILARMYVRWAEKKGYKVELQSESAGEEAGIKSATYKISGLNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+IEI+++ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIEIDVNPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL +R N Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRTN E + VLDGDLD M A LA+ Sbjct: 310 NKGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGLMGAALAL 361 >gi|237747768|ref|ZP_04578248.1| peptide chain release factor 2 [Oxalobacter formigenes OXCC13] gi|229379130|gb|EEO29221.1| peptide chain release factor 2 [Oxalobacter formigenes OXCC13] Length = 349 Score = 280 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 172/344 (50%), Positives = 239/344 (69%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+ +L +N + EDP +W + +A+ L +E++ L+N + + I+ L D Sbjct: 5 YGGIFDFAAKSDKLEQVNAELEDPDVWNDPKKAQDLGKEKKSLENVVLSLTRIKSGLDDA 64 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L E+A EE D L+ D+ + ++E +F + S D + ++++ AGAGGTE Sbjct: 65 AELFEMAKEEQDDDTLKAVDDDTLELLDQIEKLEFRRMFSNPMDPCNCFIDIQAGAGGTE 124 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA+M+LR Y R+ E++ F LE DGE AGIK+AT+ ++G AYG+L+ E GVHR Sbjct: 125 AQDWASMILRQYLRYCERKGFNATILEQSDGEVAGIKTATIKVEGDYAYGYLRTETGVHR 184 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS++ RHTSF S++VYP VDDSIEI+I+ +D R+DTYRASGAGGQH+N TDSA Sbjct: 185 LVRKSPFDSSNGRHTSFCSLFVYPEVDDSIEIDINPADVRVDTYRASGAGGQHINKTDSA 244 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+TH PTG+VVQCQ +RSQH+N+A AW ML+++L+ELEL+KR E SKT++GWG Sbjct: 245 VRLTHAPTGIVVQCQNDRSQHRNRADAWEMLKSRLFELELRKRMSEQQKLEDSKTDVGWG 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRTN E + VLDGDLDDF+ +L Sbjct: 305 HQIRSYVLD-NSRIKDLRTNHETGNTKAVLDGDLDDFILESLKQ 347 >gi|110680026|ref|YP_683033.1| peptide chain release factor 2 [Roseobacter denitrificans OCh 114] gi|123361814|sp|Q165J6|RF2_ROSDO RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|109456142|gb|ABG32347.1| peptide chain release factor 2 [Roseobacter denitrificans OCh 114] Length = 374 Score = 280 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 201/353 (56%), Positives = 254/353 (71%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + L+ L D + A RL N + EDP LW + A+ LMRERQ L +A++ Sbjct: 11 KIQKSLDLLAQRLDVETAPYRLEEFNARVEDPTLWDDPDAAQKLMRERQMLVDAMATHDS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ + DN+ L+EL EDD ++ + + L+ ++ K+ E+LL GEADSND +LEV Sbjct: 71 IKQEMADNIELIELGEMEDDADVVSDAENALRALEETAAKKELEALLDGEADSNDTFLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA+ML RMY RWAEK+ +K E + DG+EAGIKSAT I G NAYGWL Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKKGYKVELQSMSDGDEAGIKSATYKITGLNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+I+IE++ +D RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIDIEVNPADIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY+LEL +R N Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQLELDRRNAAINEAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +K + GWG QIRSYVLQPYQMVKDLRTN E + VLDGDLD FM ATLA+ Sbjct: 310 NKGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGFMAATLALD 362 >gi|46908681|ref|YP_015070.1| peptide chain release factor 2 [Listeria monocytogenes serotype 4b str. F2365] gi|67461157|sp|Q71WR9|RF2_LISMF RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|46881953|gb|AAT05247.1| peptide chain release factor 2, programmed frameshift [Listeria monocytogenes serotype 4b str. F2365] Length = 366 Score = 280 bits (715), Expect = 3e-73, Method: Composition-based stats. Identities = 173/351 (49%), Positives = 229/351 (65%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 ++Q+ G D D+ R++ L + DP+ W + A+ ++ E ++ Sbjct: 14 AQQIKDFRGSLDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALE 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + I LEL EE D + +E +++ + + + +LS D N+A LE+H Sbjct: 74 EEQESMEISLELLKEEADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHP 133 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTESQDW +MLLRMY RW+EK+ FK E L+ G+EAGIKS TLLIKG NAYG+LK Sbjct: 134 GAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKA 193 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+DS+ RRHTSF S+ V P +DD IEIE+ D +IDTYRA+GAGGQH+ Sbjct: 194 EKGVHRLVRISPFDSSGRRHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHI 253 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSAVR+THIP+G+VV CQ ERSQ KN+ QA ML+ KLY+ E +++E + Sbjct: 254 NTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQ 313 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 EIGWG QIRSYV PY MVKD RTN E + V+DGDLD+F+ A L + Sbjct: 314 KEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDEFINAYLRSR 364 >gi|115311854|sp|Q4L4H9|RF2_STAHJ RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 371 Score = 279 bits (714), Expect = 3e-73, Method: Composition-based stats. Identities = 163/353 (46%), Positives = 227/353 (64%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + L + G D++N + +P W + +A+ ++ + L + ++ E Sbjct: 12 EYRNNLAQIRGSLDFENKETNIQEYEEMMTEPDFWDDQNKAQDVIDKNNALKSVVNGYHE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +++ + D EL EE D + + N+ K +V+ + + LL G D+N+A LE+ Sbjct: 72 LEEEVEDMTATWELLQEELDGDVKSDLEQNVLDFKEKVDQFELQLLLDGPHDANNAILEL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA+MLLRMY R+ E++ FK E ++ G+EAG+KS TLLIKG NAYG+L Sbjct: 132 HPGAGGTESQDWASMLLRMYQRYGEQQGFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGG 240 K E+GVHRLVRISP+DS+ RRHTSF+S V P +D IEIEI+ D +DT+RASGAGG Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFASCDVIPEFNNDEIEIEINPDDITVDTFRASGAGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QH+N T+SA+RITH PTG+VV Q ERSQ KN+ A ML+AKLY+L+L+++E Sbjct: 252 QHINKTESAIRITHHPTGIVVNNQNERSQIKNREAAMKMLKAKLYQLKLEEQEREMAEIR 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + EIGWG QIRSYV PY MVKD RTN E V+DG++ F+++ L Sbjct: 312 GEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGEIGPFIESYLRY 364 >gi|226941341|ref|YP_002796415.1| PrfB [Laribacter hongkongensis HLHK9] gi|226716268|gb|ACO75406.1| PrfB [Laribacter hongkongensis HLHK9] Length = 368 Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats. Identities = 173/351 (49%), Positives = 242/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + D+D RL ++ EDP +W++ A+ L RE++ L++ + I I Sbjct: 17 LGSRTADIRQYLDYDGKKDRLEEVSRLVEDPTIWEDPKRAQELGREKKALEDVVLVIDSI 76 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D+ L ++ E+D + D+L ++ +E +F + S D N ++++ Sbjct: 77 LSTLADSRELFDMGRAEEDDDTVLAVRDDLAGVETRLEMLEFRRMFSNPMDPNSCFVDIQ 136 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTE+QDWA+ML RMY R+ E++ FK E +E +GE AGIKSATL ++G AYG+L+ Sbjct: 137 SGAGGTEAQDWASMLERMYLRYCERKNFKVEVIEESEGEVAGIKSATLKVEGEYAYGFLR 196 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN+RR TSF+S++VYP VDDSIEI+I+ +D RIDTYRASGAGGQH Sbjct: 197 TETGVHRLVRNSPFDSNNRRQTSFASVFVYPEVDDSIEIDINPADLRIDTYRASGAGGQH 256 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH+PT +VVQCQ +RSQHKN+A+A +ML+A+L+ELEL+KR E E + Sbjct: 257 INKTDSAVRITHLPTNIVVQCQNDRSQHKNRAEAMSMLKARLFELELRKRNEEKQALEDT 316 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KT++GWG QIRSYV VKDLRT +E + V+DGDLD F++A+L Sbjct: 317 KTDVGWGHQIRSYVFD-QSRVKDLRTLVEVGNVKGVMDGDLDGFIEASLKQ 366 >gi|91205413|ref|YP_537768.1| peptide chain release factor 2 [Rickettsia bellii RML369-C] gi|122425715|sp|Q1RIY5|RF2_RICBR RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|91068957|gb|ABE04679.1| Peptide chain release factor RF-2 [Rickettsia bellii RML369-C] Length = 368 Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats. Identities = 192/352 (54%), Positives = 250/352 (71%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + L L D + + RL+ L P LW + A+ L+RE+ +L+ + + Sbjct: 11 KIEQSLELLRRSLDVETSAARLAELEELAASPDLWNDQANAQKLLREKSNLEEQLGAYNK 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L D L L E+A E+D I+Q+ +LQ + + E L SGEADSN+ +LE+ Sbjct: 71 IRSNLKDALELEEMAEAENDLEIMQQVEKDLQSLSTIAAKFETECLFSGEADSNNCFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA++++RMY R+AE+ FKTE + + +GEEAGIKS T+ I G AYGWL Sbjct: 131 NAGAGGTESHDWASIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGRRAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+++ +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQ Sbjct: 191 KTEAGVHRLVRISPFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG V QCQ +RSQHKNKAQA ML+AKLYELE+QKR + N + Sbjct: 251 HVNTTDSAVRITHIPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +KT+ WG QIRSYVLQPYQMVKDLRT+ E + VLDGDL++F+ A+LA+ Sbjct: 311 AKTDNSWGHQIRSYVLQPYQMVKDLRTDYETSDTKGVLDGDLEEFVSASLAM 362 >gi|149202750|ref|ZP_01879722.1| peptide chain release factor 2 [Roseovarius sp. TM1035] gi|149144032|gb|EDM32066.1| peptide chain release factor 2 [Roseovarius sp. TM1035] Length = 375 Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats. Identities = 198/352 (56%), Positives = 248/352 (70%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L L W+ A RL N + EDP LW + A+ LMRERQ L +A+ Sbjct: 11 EIEKSLELLRQRLGWETARHRLEEFNARVEDPTLWDDPARAQTLMRERQALVDALETHDG 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I++ L DNL L+EL E D ++ E ++ + K+ E+LL GEADSND +LE+ Sbjct: 71 IKNELEDNLGLIELGEAESDAEVVGEAEAAIKALAKVAAAKELEALLDGEADSNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA+ML RMY RWAEKR + E G+EAGIKSA I G NAYGWL Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKRGYTVELQSESAGDEAGIKSAAYKISGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+IEIE++ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PTG+VV ++SQH+N+ A L+++LY+LEL +R N Sbjct: 251 HVNTTDSAVRITHMPTGIVVTSS-QKSQHQNRDIAMKALKSRLYQLELDRRNAAINEAHD 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRT +E + VLDGDLD+FM ATLA+ Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTGVETSDTKGVLDGDLDEFMAATLAM 361 >gi|327481446|gb|AEA84756.1| peptide chain release factor 2 [Pseudomonas stutzeri DSM 4166] Length = 370 Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats. Identities = 185/346 (53%), Positives = 244/346 (70%), Gaps = 1/346 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 + GG+FD+D RL +N + EDP++W A+ L RER L + I ++ L Sbjct: 24 SQFGGIFDYDQKHDRLVEVNRELEDPNVWNKPEYAQSLGRERATLAQIVETIDDLTGSLA 83 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D+ LLE+A EE+D + + ++R++ +E +F + S E D N+ YL++ AG+GG Sbjct: 84 DSRDLLEMAAEENDEGAVNDIVAEVERLREILEKLEFRRMFSHEMDPNNCYLDIQAGSGG 143 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDWAN+LLRMY RWA+KR F E +E+ +GE AGIK AT+ IKG A+GWL+ E GV Sbjct: 144 TEAQDWANILLRMYLRWADKRGFSAEIVELSEGEVAGIKGATVHIKGEYAFGWLRTEIGV 203 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ +D RIDTYR+SGAGGQHVNTTD Sbjct: 204 HRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTD 263 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PT VV CQ ERSQH NK A MLRAKLYELE+QKR + E SK++IG Sbjct: 264 SAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDSKSDIG 323 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYVL +KDLRT +E++ VLDGDLD +++A+L Sbjct: 324 WGHQIRSYVLDD-SRIKDLRTGVERSDCQKVLDGDLDGYLEASLKQ 368 >gi|116617317|ref|YP_817688.1| peptide chain release factor 2 [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|122272482|sp|Q03ZQ7|RF2_LEUMM RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|116096164|gb|ABJ61315.1| bacterial peptide chain release factor 2 (bRF-2) [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 372 Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats. Identities = 150/353 (42%), Positives = 219/353 (62%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + G D + + ++ + +P W + +A+ ++ E L N + Sbjct: 13 MQENIERFRGTLDMEALTEEIADYENRMTEPDFWNDNEKAQKVIEENNVLKNRRDSFLNL 72 Query: 63 QDRLCDNLILLEL-ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +++ + +L+E+ + +D L E + + + +++ E LL+ D+N+A LE+ Sbjct: 73 TNQVEELELLIEMAVEDPEDEDTLGELEAGVAKAQKDIDAYNLEQLLTEPYDANNAILEI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H G+GGTES DW L RMYTRWA++ F+ E L+ H G+EAGI SAT+ + G NAYG+L Sbjct: 133 HPGSGGTESTDWGANLYRMYTRWAQQHDFQVETLDYHAGDEAGIDSATIKVTGHNAYGFL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E+GVHR VRISP+DS RRHTSF S+ V P +DDSIE+E+ + D ++D +R+ GAGGQ Sbjct: 193 RSEKGVHRFVRISPFDSAGRRHTSFVSVDVMPELDDSIEVEVRDDDVKMDVFRSGGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN + VR+TH PTG+VV ER+Q+ N+ A +L++KLY+LEL+K+E Sbjct: 253 NVNKVSTGVRLTHEPTGIVVSSTVERTQYGNRDYAMRLLKSKLYQLELEKKEAERAALTG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K E GWG QIRSYVL PYQMVKD RTN E P VLDGDLD F+ A L + Sbjct: 313 EKMENGWGSQIRSYVLHPYQMVKDHRTNYETNQPQAVLDGDLDPFINAYLQWQ 365 >gi|67459393|ref|YP_247017.1| peptide chain release factor 2 [Rickettsia felis URRWXCal2] gi|75536187|sp|Q4UKS1|RF2_RICFE RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|67004926|gb|AAY61852.1| Peptide chain release factor RF-2 [Rickettsia felis URRWXCal2] Length = 368 Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats. Identities = 188/352 (53%), Positives = 250/352 (71%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + L L D +++ +RL+ L T DP LW + A+ L+RE+ +L+ ++ + Sbjct: 11 KIEQSLELLWRSLDVESSTERLNELEELTSDPSLWNDQANAQTLLREKSNLEEKLNAFNK 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D L L E+A E+D L + +L+ + + + E L SGEAD N+ +LE+ Sbjct: 71 LKSNLKDTLELEEMAEAENDLETLSQIEQDLKNLSVIAAKFETECLFSGEADGNNCFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DW ++++RMY R+AE+ FKTE + + +GEEAGIKS T+ I G AYGW Sbjct: 131 NAGAGGTESHDWVSIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWF 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+++ +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQ Sbjct: 191 KTEAGVHRLVRISPFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPT V QCQ +RSQHKNKAQA ML+AKLYELE+QKR + N + Sbjct: 251 HVNTTDSAVRITHIPTNTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +KT+ WG QIRSYVLQPYQMVKDLRT+ E + VLDGDL+DF+ A+LA+ Sbjct: 311 AKTDNSWGHQIRSYVLQPYQMVKDLRTDYETSDTKGVLDGDLEDFVSASLAM 362 >gi|85702878|ref|ZP_01033982.1| peptide chain release factor 2 [Roseovarius sp. 217] gi|85671806|gb|EAQ26663.1| peptide chain release factor 2 [Roseovarius sp. 217] Length = 375 Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats. Identities = 198/352 (56%), Positives = 247/352 (70%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L L W+ A RL N + EDP LW + A+ LMRERQ L +A+ Sbjct: 11 EIEKSLELLRQRLGWETARHRLEEFNARVEDPTLWDDPARAQSLMRERQALVDALDTHDS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L DNL L+EL E+D ++ E ++ + K+ E+LL GEADSND +LE+ Sbjct: 71 LKQELEDNLGLIELGEMENDTEVVSEAEAAIKALAKVAAAKELEALLDGEADSNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA+ML RMY RWAEKR + E GEEAGIKSA I G NAYGWL Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKRGYTVELQSESAGEEAGIKSAAYKISGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+IEIE++ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG+VV ++SQH+N+ A L+++LY+ EL +R N Sbjct: 251 HVNTTDSAVRITHIPTGIVVTSS-QKSQHQNRDIAMKALKSRLYQQELDRRNAAINEAHD 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRT +E + VLDGDLD+FM ATLA+ Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTGVETSDTKGVLDGDLDEFMAATLAM 361 >gi|262283020|ref|ZP_06060787.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Streptococcus sp. 2_1_36FAA] gi|262261272|gb|EEY79971.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Streptococcus sp. 2_1_36FAA] Length = 347 Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats. Identities = 159/344 (46%), Positives = 221/344 (64%), Gaps = 2/344 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GGLFD + + ++ L K +P W + I A+ +E L ++ D ++ Sbjct: 4 GGLFDLEGLEEEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTDLFDESE 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 ILL+ +D S+ +E + L ++ + + LLS D+N+A LE+H G+GGTE+ Sbjct: 64 ILLDF--LAEDDSVQEELEEKLAELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEA 121 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDW +MLLRMYTR+ + FK E L+ G+EAGIKS TL +GP+AYG LK E GVHRL Sbjct: 122 QDWGDMLLRMYTRFGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRL 181 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+DS RRHTSF+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + V Sbjct: 182 VRISPFDSAKRRHTSFTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGV 241 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+THIPTG+VVQ +R+Q+ N+ +A ML+AKLY+LE +K+ + + K EI WG Sbjct: 242 RLTHIPTGIVVQSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEISWGS 301 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QIRSYV PY MVKD RT+ E V+DGDLD F+ A L + Sbjct: 302 QIRSYVFTPYTMVKDHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 345 >gi|49485626|ref|YP_042847.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus MSSA476] gi|57650094|ref|YP_185692.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus COL] gi|150393263|ref|YP_001315938.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus JH1] gi|56749392|sp|Q6GB76|RF2_STAAS RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|56749443|sp|Q7A6R4|RF2_STAAN RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|56749454|sp|Q99VM1|RF2_STAAM RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|71153100|sp|Q5HHR5|RF2_STAAC RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|115311853|sp|Q2YSH5|RF2_STAAB RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|189040005|sp|A6TZN3|RF2_STAA2 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|49244069|emb|CAG42495.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus MSSA476] gi|57284280|gb|AAW36374.1| peptide chain release factor 2, programmed frameshift [Staphylococcus aureus subsp. aureus COL] gi|149945715|gb|ABR51651.1| hypothetical protein SaurJH1_0795 [Staphylococcus aureus subsp. aureus JH1] gi|269940331|emb|CBI48708.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus TW20] Length = 369 Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats. Identities = 164/353 (46%), Positives = 225/353 (63%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K ++ L + G D +N + +P+ W N +A+ ++ + L ++ K Sbjct: 12 KYNQDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKT 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +Q + D +L EE D + ++ + K +V+ + + LL G D+N+A LE+ Sbjct: 72 LQAEVDDMDATWDLLQEEFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILEL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWANML RMY R+ EK+ FK E ++ G+EAGIKS TLLIKG NAYG+L Sbjct: 132 HPGAGGTESQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGG 240 K E+GVHRLVRISP+DS+ RRHTSF+S V P +D IEIEI+ D +DT+RASGAGG Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QH+N T+SA+RITH P+G+VV Q ERSQ KN+ A ML++KLY+L+L+++ Sbjct: 252 QHINKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIR 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + EIGWG QIRSYV PY MVKD RTN E V+DGD+ F+++ L Sbjct: 312 GEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLRQ 364 >gi|171463253|ref|YP_001797366.1| peptide chain release factor 2 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192791|gb|ACB43752.1| peptide chain release factor 2 [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 349 Score = 279 bits (713), Expect = 5e-73, Method: Composition-based stats. Identities = 169/346 (48%), Positives = 244/346 (70%), Gaps = 1/346 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD+D +RL+ +N+ EDP +W + +A+ L +E++ LD ++ + ++ + Sbjct: 3 KLFGGIFDFDVKSRRLTEINSILEDPTIWDDQKKAQALGKEKKLLDGIVATLTDLNTNIT 62 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L L ++A EE D + +++ + +F + E DS + ++++ AGAGG Sbjct: 63 SALELFDMAKEESDFETIAAIEQDVEGYSKIIGDLEFRRMFHNEMDSCNCFIDIQAGAGG 122 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DWA+ML R Y ++ E++ +KTE LE DG+ AGIKSAT+ + G AYG L+ E GV Sbjct: 123 TEACDWASMLYRQYLKYCERKGYKTEILEESDGDVAGIKSATIKVDGEYAYGHLRSETGV 182 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS++ RHTSF+SI+VYP +DDSIEIE++ +D R DTYRASGAGGQH+N TD Sbjct: 183 HRLVRKSPFDSSNGRHTSFASIYVYPEIDDSIEIEVNPADIRTDTYRASGAGGQHINKTD 242 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+VVQCQ +RSQH+N+A+A ML+++LYE E+QKR + E+SKT++G Sbjct: 243 SAVRLTHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHEMQKRRAEQDKLEASKTDVG 302 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 303 WGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDAFIEASLKQ 347 >gi|323526607|ref|YP_004228760.1| peptide chain release factor 2 [Burkholderia sp. CCGE1001] gi|323383609|gb|ADX55700.1| Peptide chain release factor 2 [Burkholderia sp. CCGE1001] Length = 367 Score = 279 bits (713), Expect = 5e-73, Method: Composition-based stats. Identities = 177/351 (50%), Positives = 248/351 (70%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + L G D+D+ +RL +N + EDP +W + A+ L RE++ LD+ + + + Sbjct: 16 LRTRAADLRGYLDYDDKSRRLIEVNRELEDPDVWNDSKHAQALGREKKLLDDTVGKLTSL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L E+A EE D L + Q ++ V +F + + AD N+A+L++ Sbjct: 76 HNDLRDAQDLFEMAREEGDDETLVACEADAQALEQRVADMEFRRMFANPADPNNAFLDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y R+ E++ FKTE LE DG+ AGIK+AT+ I+G AYG+L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ RHTSFSS++VYP +DDSIE++I+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH+P+G+VVQCQ +RSQH+N+A+A ML+++LYE E++KR+ + E+ Sbjct: 256 INKTDSAVRITHMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F+ A+L Sbjct: 316 KTDVGWGHQIRSYVLD-NSRIKDLRTNVEISNTKSVLDGDLDPFISASLKQ 365 >gi|220929619|ref|YP_002506528.1| hypothetical protein Ccel_2206 [Clostridium cellulolyticum H10] gi|219999947|gb|ACL76548.1| hypothetical protein Ccel_2206 [Clostridium cellulolyticum H10] Length = 373 Score = 279 bits (713), Expect = 5e-73, Method: Composition-based stats. Identities = 170/350 (48%), Positives = 234/350 (66%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + D ++ L K +P W ++ ++ ++++ + L I I Sbjct: 14 LKSNLEEMRASLDIARISDEIAELEHKASEPEFWNDMENSQKILQKTKILKTKIERFNNI 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L EL LEE D S++ E + L ++K +E + E+LL+G D N+A L +H Sbjct: 74 TSQWEDLFTLAELGLEEQDESVIPEVGEGLVQLKNNLESLRLETLLTGPYDKNNAILTLH 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDW MLLRM+TRW E + ++ + L+ DG+EAGIKS T+ + G NAYG+LK Sbjct: 134 AGAGGTEAQDWVQMLLRMFTRWGEAKGYEVKILDYLDGDEAGIKSVTIHVIGENAYGYLK 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS+ RRHTSF+S+ V P +DD+IEI I+ D RIDTYRASGAGGQH Sbjct: 194 SEKGVHRLVRISPFDSSGRRHTSFASLDVMPELDDTIEININPDDLRIDTYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSA+RITHIPTGVVV CQ ERSQ +NK A ML+AKL+EL+ ++++E + Sbjct: 254 INKTDSAIRITHIPTGVVVSCQTERSQFQNKDTAMKMLKAKLFELKEREQKEKIEDLKGV 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + +I WG QIRSYV PY +VKD RTN E+ + V+DG+LD F+ A L+ Sbjct: 314 QMDIAWGSQIRSYVFCPYTLVKDHRTNYEEGNVDAVMDGELDGFINAYLS 363 >gi|259046384|ref|ZP_05736785.1| peptide chain release factor 2 [Granulicatella adiacens ATCC 49175] gi|259036929|gb|EEW38184.1| peptide chain release factor 2 [Granulicatella adiacens ATCC 49175] Length = 361 Score = 279 bits (713), Expect = 5e-73, Method: Composition-based stats. Identities = 161/349 (46%), Positives = 227/349 (65%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 +L+ +GGLFD D + ++ + +P W + +A ++++ L + +++ Sbjct: 2 SKLSAIGGLFDLDRLEEDIAAYEQEMSEPSFWDDSEKANQVIQKNNELKSIYDTFHKMEL 61 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 + +L E+ EE D + E + +Q ++ +++ + LL+G D N A LE+H G Sbjct: 62 AHEETSLLFEMYKEEPDEEVHAEIVEAIQSLEKDLQRYELSMLLNGPHDKNSAILEIHPG 121 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGGTESQDW +MLLRMY RWAEK ++ E ++ DG+EAGIKS TL I+G NAYG+L+ E Sbjct: 122 AGGTESQDWGSMLLRMYMRWAEKHGYRVETVDYQDGDEAGIKSVTLSIEGLNAYGYLRSE 181 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 +GVHRLVRISP+D+ +RHTSF S+ V P +D I+IEI+ D ++D YRASGAGGQH+N Sbjct: 182 KGVHRLVRISPFDAAGKRHTSFCSVDVVPQMDGDIDIEINPDDLKVDVYRASGAGGQHIN 241 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T SAVRITHIPTG+V Q Q +RSQ KN+ QA ML+AKL++LE +K+ + Sbjct: 242 KTSSAVRITHIPTGIVTQSQAQRSQFKNRDQAMAMLKAKLFQLEEEKKAAELAAIRGEQK 301 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +I WG QIR+YV PY MVKDLR+ E + V+DGDLD FM A L Sbjct: 302 DIAWGSQIRNYVFHPYSMVKDLRSGYETGNIGAVMDGDLDSFMDAYLKW 350 >gi|217970376|ref|YP_002355610.1| peptide chain release factor 2 [Thauera sp. MZ1T] gi|217507703|gb|ACK54714.1| conserved hypothetical protein [Thauera sp. MZ1T] Length = 367 Score = 279 bits (713), Expect = 6e-73, Method: Composition-based stats. Identities = 180/351 (51%), Positives = 240/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + L D+D +L +N EDP +W N A+ L +E++ L++ + +++I Sbjct: 16 LAARGRELRRYLDYDVKASKLEEVNRALEDPAVWNNAERAQELGKEKRQLEDVVLTLQKI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L ELA EDD + +L ++ +E +F + S D N+ ++E+ Sbjct: 76 DAQSRDLKDLFELAEAEDDDDTFEAVEADLVELQGAIEKLEFRRMFSNPMDPNNCFIEIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA ML RMY R+ EK+ F E +E +GE AGIK+ T+ G AYG+L+ Sbjct: 136 AGAGGTEAQDWAGMLERMYLRYGEKKGFTVELMEETEGEVAGIKNCTIKFSGEYAYGYLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DSN+RRHTSF+S++VYP VDDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGIHRLVRKSPFDSNARRHTSFTSVFVYPEVDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQHKNKA+A +ML+A+LYE EL+KR+ E S Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHKNKAEAMSMLKARLYEAELRKRQSEQQKLEDS 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRTN E + VLDGDLDDF+ A+L Sbjct: 316 KSDIGWGHQIRSYVLD-QSRIKDLRTNYEVGNTQAVLDGDLDDFIGASLKQ 365 >gi|118090032|ref|YP_873927.1| peptide chain release factor 2 [Streptococcus pneumoniae TIGR4] gi|123517990|sp|Q2MGI2|RF2_STRPN RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|85720582|gb|ABC75805.1| peptide chain release factor 2, programmed frameshift [Streptococcus pneumoniae TIGR4] Length = 364 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 154/351 (43%), Positives = 213/351 (60%), Gaps = 2/351 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 +L G D + + ++ L K +P W + I A+ +E L N + +++ Sbjct: 14 REKLASFRGSLDLEGLEEEIAILENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKME 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + + ILL+ E++ + + LLS D N+A LE+H Sbjct: 74 ELQDEVEILLDFLAEDESVHDELVAQLAELD--KIMTSYEMTLLLSEPYDHNNAILEIHP 131 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTE+QDW +MLLRMYTR+ + FK E L+ G+EAGIKS TL +GPNAYG LK Sbjct: 132 GSGGTEAQDWGDMLLRMYTRYGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKS 191 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVRISP+DS RRHTSF+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+V Sbjct: 192 EMGVHRLVRISPFDSAKRRHTSFTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNV 251 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N + VR+THIPTG+VVQ +R+Q+ N+ +A ML+AKLY++E K+ + + K Sbjct: 252 NKVSTGVRLTHIPTGIVVQSTVDRTQYGNRDRAMKMLQAKLYQMEQDKKAAEVDSLKGEK 311 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 EI WG QIRSYV PY MVKD RT+ E V+DGDLD F+ A L + Sbjct: 312 KEITWGSQIRSYVFTPYTMVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWR 362 >gi|85708766|ref|ZP_01039832.1| protein chain release factor B [Erythrobacter sp. NAP1] gi|85690300|gb|EAQ30303.1| protein chain release factor B [Erythrobacter sp. NAP1] Length = 375 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 200/353 (56%), Positives = 264/353 (74%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ L + DW+ A++RL LN + +DP LW + EA+ + RE++ L++A++ + E Sbjct: 11 RIEAALALVRQSLDWERALRRLDELNARVQDPTLWDDPKEAQKISREQKQLEDAVNTVNE 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I + D + +E+ E + SI+ + +L+++ + + ++LLSGEAD ND YLE+ Sbjct: 71 ISAEMGDAVEFIEMGEAEGEESIVNDGLKSLEKLAARADADKVQALLSGEADGNDTYLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA ML RMY RWAE+R FK E +E G++AGIKSATLL+KG NAYG+ Sbjct: 131 HAGAGGTESQDWAEMLFRMYGRWAERRGFKVETVEYQAGDQAGIKSATLLLKGDNAYGYA 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS ++RHTSFSS+WVYPV+DD I+IEI+ +D +IDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSAAKRHTSFSSVWVYPVIDDDIDIEINPADLKIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV Q +RSQHKN+A A NML+A+L+E E+ +RE A+ Sbjct: 251 HVNTTDSAVRITHQPTGIVVASQNDRSQHKNRATAMNMLKARLFEREMAEREAAASGEYQ 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVLQPYQMVKDLRT + +SP VLDGD+DD++ A LA + Sbjct: 311 EKSEIGWGHQIRSYVLQPYQMVKDLRTGVTSSSPDRVLDGDIDDYISAALAQR 363 >gi|326316598|ref|YP_004234270.1| peptide chain release factor 2 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373434|gb|ADX45703.1| Peptide chain release factor 2 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 367 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 168/351 (47%), Positives = 236/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS++ L D+D +RL +N EDP +W + +A+ L +E++ L + + ++ Sbjct: 16 LSQRTQELRRYLDFDAKFERLRTVNASLEDPSVWNDPKKAQELGKEQKSLSAVVVTLDKL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN L E++ EE D + L +++ +E +F + S EAD + ++++ Sbjct: 76 TRELADNAELYEMSKEEGDEAGLLTIEAETAKLRPLIEELEFRRMFSNEADPLNCFVDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA MLLR Y ++AE++ FK + G+ AGIKSAT+ I+G AYG L+ Sbjct: 136 AGAGGTEACDWAGMLLRQYLKYAERKGFKATVEDETPGDVAGIKSATIKIEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ RHTSF+S++VYP +DDSIEI I+ +D R DT+RASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASLFVYPEIDDSIEININPADVRTDTFRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVR+THIPTG+VVQCQ RSQH N+ AW LR++LY+ E++KR E E + Sbjct: 256 INKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKRMEEQQKLEDT 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 316 KTDVGWGHQIRSYVLD-NSRIKDLRTNVEVSATQKVLDGDLDVFIEASLKQ 365 >gi|126726324|ref|ZP_01742165.1| peptide chain release factor 2 [Rhodobacterales bacterium HTCC2150] gi|126704187|gb|EBA03279.1| peptide chain release factor 2 [Rhodobacterales bacterium HTCC2150] Length = 375 Score = 278 bits (712), Expect = 6e-73, Method: Composition-based stats. Identities = 198/351 (56%), Positives = 250/351 (71%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +++ L L D++ RL N TEDP+LW + +A+ LMR+RQ L +A + ++ Sbjct: 12 INKSLALLRQRMDFETVPHRLEEFNALTEDPNLWNDPEKAQKLMRDRQLLLDAYNNYNKL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN+ L+EL EDD ++ E L+ + K+ E+LL+GEADSND +LE++ Sbjct: 72 AQDLADNVELIELGEMEDDEDVVAEAEAGLRSVVEIAAKKELEALLNGEADSNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTES DWANML RMY RWAE R +K E GEEAGIKSA I G NAYGWLK Sbjct: 132 SGAGGTESCDWANMLARMYVRWAEARGYKVELQSETAGEEAGIKSAAYKISGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DS ++RHTSFSSIWVYPVVDD+I+IE++ +D RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPFDSAAKRHTSFSSIWVYPVVDDNIDIEVNPADIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL +R N + Sbjct: 252 VNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHEN 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K + GWG QIRSYVLQPYQMVKDLRTN+E + VLDGDLD FM ATLA+ Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTNVETSDTKGVLDGDLDQFMAATLAL 361 >gi|317121051|ref|YP_004101054.1| bacterial peptide chain release factor 2 (bRF-2) [Thermaerobacter marianensis DSM 12885] gi|315591031|gb|ADU50327.1| bacterial peptide chain release factor 2 (bRF-2) [Thermaerobacter marianensis DSM 12885] Length = 416 Score = 278 bits (712), Expect = 7e-73, Method: Composition-based stats. Identities = 158/352 (44%), Positives = 215/352 (61%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L L D + + + DP W A+ +R+ + L + + + Sbjct: 12 LRPRLEELRDDLDLAGKRREIERIEQAMTDPSFWDEPDRAQQQVRQLKVLKGPVEHYEAL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + +L D +L ELA EE D S++ E + + + + + + + LL+G D DA + +H Sbjct: 72 ERQLDDLQVLAELAAEEADVSVIPELEEGIAKAEEGLRQLELDLLLNGPYDGYDAIVSLH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA ML RMYTRWAE ++ E L++ +GEEAGIKS T ++GPNAYG+L+ Sbjct: 132 PGAGGTESQDWAQMLWRMYTRWAEDHGYQVEVLDLLEGEEAGIKSVTFAVRGPNAYGYLR 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+ RRHTSF+S+ V P + DS EIEI D RID +RA G GGQH Sbjct: 192 SEHGVHRLVRISPFDAAGRRHTSFASVDVLPDLGDSPEIEIRPEDLRIDVFRAGGHGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRI H+PTG+V CQ ERSQH N+ A +L+A+L ++R + Sbjct: 252 VNKTESAVRIVHLPTGIVATCQNERSQHANRETAMKILKARLARYYEEQRLKEIAALRGD 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 EI WG QIRSYV QPY +VKD RT +E + V+DG LD F+ A L + Sbjct: 312 VGEIAWGNQIRSYVFQPYTLVKDHRTGVEVGNVQAVMDGHLDPFINAYLRWE 363 >gi|227431353|ref|ZP_03913406.1| peptide chain release factor RF2 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352946|gb|EEJ43119.1| peptide chain release factor RF2 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 372 Score = 278 bits (712), Expect = 7e-73, Method: Composition-based stats. Identities = 151/353 (42%), Positives = 218/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + G D + + ++ + +P W + +AK ++ E L N + Sbjct: 13 MQENIERFRGTLDMEALTEEIADYENRMTEPDFWNDNEKAKKVIEENNVLKNRRDSFLNL 72 Query: 63 QDRLCDNLILLEL-ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +++ + +L+E+ + +D L E + + +++ E LL+ D+N+A LE+ Sbjct: 73 TNQVEELELLIEMAVEDPEDEDTLGELEAGVANAQKDIDAYNLEQLLTEPYDANNAILEI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H G+GGTES DW L RMYTRWA++ F+ E L+ H G+EAGI SAT+ + G NAYG+L Sbjct: 133 HPGSGGTESTDWGANLYRMYTRWAQQHDFQVETLDYHAGDEAGIDSATIKVTGHNAYGFL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E+GVHR VRISP+DS RRHTSF S+ V P +DDSIE+E+ + D ++D +R+ GAGGQ Sbjct: 193 RSEKGVHRFVRISPFDSAGRRHTSFVSVDVMPELDDSIEVEVRDDDVKMDVFRSGGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN + VR+TH PTG+VV ER+Q+ N+ A +L++KLY+LEL+K+E Sbjct: 253 NVNKVSTGVRLTHEPTGIVVSSTVERTQYGNRDYAMRLLKSKLYQLELEKKEAERAALTG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K E GWG QIRSYVL PYQMVKD RTN E P VLDGDLD F+ A L + Sbjct: 313 EKMENGWGSQIRSYVLHPYQMVKDHRTNYETNQPQAVLDGDLDPFINAYLQWQ 365 >gi|157149715|ref|YP_001450721.1| peptide chain release factor 2 [Streptococcus gordonii str. Challis substr. CH1] gi|189040006|sp|A8AY61|RF2_STRGC RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|157074509|gb|ABV09192.1| peptide chain release factor 2 [Streptococcus gordonii str. Challis substr. CH1] Length = 364 Score = 278 bits (712), Expect = 7e-73, Method: Composition-based stats. Identities = 157/351 (44%), Positives = 220/351 (62%), Gaps = 2/351 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 +L G D + + ++ L K +P W + I A+ +E L ++ Sbjct: 14 REKLASFRGSLDLEGLEEEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMT 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 D ++ ILL+ +D S+ +E + L ++ + + LLS D+N+A LE+H Sbjct: 74 DLFDESEILLDF--LAEDDSVQEELEEKLAELEKMMTSYEMTLLLSEPYDNNNAILEIHP 131 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTE+QDW +MLLRMYTR+ + FK E L+ G+EAGIKS TL +GP+AYG LK Sbjct: 132 GSGGTEAQDWGDMLLRMYTRFGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKS 191 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVRISP+DS RRHTSF+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+V Sbjct: 192 EMGVHRLVRISPFDSAKRRHTSFTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNV 251 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N + VR+THIPTG+VVQ +R+Q+ N+ +A ML+AKLY+LE +K+ + + K Sbjct: 252 NKVSTGVRLTHIPTGIVVQSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDK 311 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 EI WG QIRSYV PY MVKD RT+ E V+DGDLD F+ A L + Sbjct: 312 KEISWGSQIRSYVFTPYTMVKDHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 362 >gi|307729220|ref|YP_003906444.1| hypothetical protein BC1003_1175 [Burkholderia sp. CCGE1003] gi|307583755|gb|ADN57153.1| hypothetical protein BC1003_1175 [Burkholderia sp. CCGE1003] Length = 367 Score = 278 bits (712), Expect = 7e-73, Method: Composition-based stats. Identities = 178/351 (50%), Positives = 249/351 (70%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + L G D+D+ +RL +N + EDP +W + A+ L RE++ LD+ + + + Sbjct: 16 LRTRAADLRGYLDYDDKSRRLIEVNRELEDPDVWNDSKHAQALGREKKLLDDTVGKLTSL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L E+A EE D L + Q ++ V +F + + AD N+A+L++ Sbjct: 76 DNDLRDTQDLFEMAREEGDDETLLACEADAQALEQRVADMEFRRMFANPADPNNAFLDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y R+ E++ FKTE LE DG+ AGIK+AT+ I+G AYG+L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ RHTSFSS++VYP +DDSIE++I+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH+P+G+VVQCQ +RSQH+N+A+A ML+++LYE E++KR+E + E+ Sbjct: 256 INKTDSAVRITHMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQEEQDKLEAG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F+ A+L Sbjct: 316 KTDVGWGHQIRSYVLD-NSRIKDLRTNVEISNTKSVLDGDLDPFISASLKQ 365 >gi|303257507|ref|ZP_07343519.1| peptide chain release factor 2 [Burkholderiales bacterium 1_1_47] gi|302859477|gb|EFL82556.1| peptide chain release factor 2 [Burkholderiales bacterium 1_1_47] Length = 348 Score = 278 bits (712), Expect = 7e-73, Method: Composition-based stats. Identities = 173/347 (49%), Positives = 243/347 (70%), Gaps = 1/347 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + GG+FD+D +RL +N EDP +W + A+ L +E++ L++ + IK + L Sbjct: 1 MKSCGGIFDYDQKERRLEEVNQALEDPSIWSDQERAQQLSKEKKRLEDVVLTIKHLTTGL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D L L E+A EEDD + L+ ++ +K EVE+ +F+ + + E D + +LE+ AGAG Sbjct: 61 SDALELFEMAKEEDDDASLEAVEADINNLKKEVEHLEFQRMFNQEHDEANCFLEIQAGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWA+ML RMY ++AE++ FK E +E +G+ AGIK T+ I G AYGWL+ E G Sbjct: 121 GTEAQDWASMLERMYIKFAERQSFKPEIVEETEGDVAGIKGCTIKITGDYAYGWLRTETG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRLVR SP+DSN+RRHTSF+S++V P VDDS EIE++ +D RIDT+RASGAGGQH+ T Sbjct: 181 IHRLVRKSPFDSNARRHTSFASVFVVPEVDDSFEIEVNPADLRIDTFRASGAGGQHIQKT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIPTG+V Q RSQH+NK +A +L+++LYE EL+KR+ E +K++I Sbjct: 241 DSAVRITHIPTGIVAVSQTSRSQHQNKEEAMTILKSRLYEAELRKRQATQQALEDNKSDI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYVL VKDLRTN+E + + VLDG L+ F++A+L Sbjct: 301 SWGHQIRSYVLD-QSRVKDLRTNVETGNTTAVLDGALESFIEASLKQ 346 >gi|86136665|ref|ZP_01055244.1| peptide chain release factor 2 [Roseobacter sp. MED193] gi|85827539|gb|EAQ47735.1| peptide chain release factor 2 [Roseobacter sp. MED193] Length = 374 Score = 278 bits (712), Expect = 7e-73, Method: Composition-based stats. Identities = 197/352 (55%), Positives = 253/352 (71%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L L +W+ A RL N + EDP+LW + A+ LMRERQ+L +AI K Sbjct: 11 EIEKSLELLAQRLNWETAEYRLEEFNARVEDPNLWDDAEAAQKLMRERQNLVDAIDTYKG 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L DN+ L+EL E+D ++ + + L+ +K+ K+ E+LL GEADSND +LE+ Sbjct: 71 IKQDLADNIELIELGEMEEDQEVITDAEEALKALKVSAAEKELEALLDGEADSNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTES DWA+ML RMY RWAEK+ +K E GEEAGIKSA I G NAYGWL Sbjct: 131 NSGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGEEAGIKSAAYKISGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSF S+WVYPVVDD+IEI+++ +D RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFCSVWVYPVVDDNIEIDVNPADIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL +R N Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRT+ E + VLDGDLD FM ATLA+ Sbjct: 310 NKGDAGWGSQIRSYVLQPYQMVKDLRTSHETSDTKGVLDGDLDGFMAATLAL 361 >gi|301165910|emb|CBW25483.1| peptide chain release factor 2 [Bacteriovorax marinus SJ] Length = 358 Score = 278 bits (711), Expect = 7e-73, Method: Composition-based stats. Identities = 175/347 (50%), Positives = 228/347 (65%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + GG F+ + RLS ++ W + A + +E+ L + + +++ Sbjct: 1 MKTYGGHFEVERKSARLSEISDMEAMEGFWDDSDNAAKVQKEKSVLSDVVETYTTLKELF 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 + +L+E A E+D E D + + + + LLSGE D N+A + ++AGAG Sbjct: 61 DEFEVLVEFANGEEDEDSALEAIDCYDKFLKQFNAAELKVLLSGEVDPNNAIVSINAGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTES DWA+ML RM RWAE + FK + L++ DG+ AGIKSAT+ I G AYG+LK E G Sbjct: 121 GTESCDWASMLFRMINRWAESKAFKVQVLDVQDGDSAGIKSATMTISGNYAYGYLKSEIG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+DSN+RRHTSFSSI+V P +DD+IEIEI + D +ID YR+ GAGGQ VNTT Sbjct: 181 VHRLVRISPFDSNARRHTSFSSIFVSPEIDDNIEIEILDKDLKIDVYRSGGAGGQSVNTT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIPT VV CQ ERSQ +NK QA +LR++LYELE++KR E+SK EI Sbjct: 241 DSAVRITHIPTNTVVTCQNERSQLQNKLQAMKVLRSRLYELEMEKRRAQEAETEASKQEI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 GWG QIRSYVL PY++VKD RT+ E + VLDGDLD FM A L Sbjct: 301 GWGAQIRSYVLHPYKLVKDTRTSFESGNAEKVLDGDLDGFMDAFLRW 347 >gi|320116558|ref|YP_004186717.1| peptide chain release factor 2 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|319929649|gb|ADV80334.1| Peptide chain release factor 2 [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 368 Score = 278 bits (711), Expect = 8e-73, Method: Composition-based stats. Identities = 165/350 (47%), Positives = 233/350 (66%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 ++ +G D ++ + + ++ K DP W ++ +++ L ++++ L + + Sbjct: 14 EEVKEMGVSLDIESVKREIEEIDKKMSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVS 73 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 + D L+EL LEE D SI E + +K ++E + ++LL+G D N+A L +HAG Sbjct: 74 KWEDLSTLIELGLEEGDESITDEVDKEYKELKKKLEDLKIKTLLNGPYDKNNAILSIHAG 133 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 +GGTE+QDWA MLLRMYTRWA + F+ E L+ GEEAGIKS TL+IKGP AYG+LK E Sbjct: 134 SGGTEAQDWAEMLLRMYTRWANDKGFEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSE 193 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHRLVRISP+D+ RRHTSF+ + V P +++ IE+EI D +IDTYRASGAGGQ+VN Sbjct: 194 AGVHRLVRISPFDAAGRRHTSFALVEVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVN 253 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T+SAVRITH+PTG+VV CQ ERSQ +N+ A ML+AKL +L +++++E + Sbjct: 254 KTESAVRITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHR 313 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 E WG QIRSYV QPY +VKD RTN E + V+DG++D F+ A L K Sbjct: 314 EAAWGNQIRSYVFQPYTLVKDHRTNYEVGNVQAVMDGEIDGFINAYLKQK 363 >gi|15604144|ref|NP_220659.1| peptide chain release factor 2 [Rickettsia prowazekii str. Madrid E] gi|6225944|sp|Q9ZDQ2|RF2_RICPR RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|3860836|emb|CAA14736.1| PEPTIDE CHAIN RELEASE FACTOR 2 (prfB) [Rickettsia prowazekii] Length = 369 Score = 278 bits (711), Expect = 8e-73, Method: Composition-based stats. Identities = 178/352 (50%), Positives = 246/352 (69%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + L+ + D + RL+ L T DP+LW N A+ L+RE+ +L+ ++ + Sbjct: 11 KIEQSLDLIWRSLDIEALTVRLTELEELTADPNLWNNNANAQTLLREKNNLEEKLNVFNK 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L + L L +A E+D L + + +++ + + E L SGE D N+ +LE+ Sbjct: 71 LKSNLKEILELEAMAEVENDLETLNQIEQDFKKLSIITAKFETECLFSGETDCNNCFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA++++RMY R+AE+ FKT+ + + +GEE GIKS T+ I G AYGW Sbjct: 131 NAGAGGTESHDWASIMMRMYLRFAERLGFKTKIINMINGEEVGIKSCTIRIIGKRAYGWF 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+++ +R TSF+S W+YP +DD I I I + D RIDT+R+SGAGGQ Sbjct: 191 KTESGVHRLVRISPFNAAGKRMTSFASSWIYPEIDDDIAITIEDKDLRIDTFRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPT V QCQ +RSQHKNKAQA ML+AKLY+LE+QKR E + + Sbjct: 251 HVNTTDSAVRITHIPTNTVTQCQSDRSQHKNKAQAMKMLQAKLYKLEMQKRNENVDKQNA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +KT+ WG QIRSYVLQPYQ+VKDLRTN E + VLDG+L+DF+ A+L++ Sbjct: 311 NKTDNSWGHQIRSYVLQPYQIVKDLRTNYETSDTKGVLDGNLEDFVSASLSM 362 >gi|15892291|ref|NP_360005.1| peptide chain release factor 2 [Rickettsia conorii str. Malish 7] gi|24638155|sp|Q92IQ2|RF2_RICCN RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|15619432|gb|AAL02906.1| peptide chain release factor RF-2 [Rickettsia conorii str. Malish 7] Length = 368 Score = 278 bits (711), Expect = 8e-73, Method: Composition-based stats. Identities = 188/352 (53%), Positives = 249/352 (70%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + L L D + + +RL+ L T DP LW + A+ L+RE+ +L+ ++ + Sbjct: 11 KIEQSLELLWRSLDVEASTERLNALEELTADPSLWNDQANAQKLLREKSNLEEKLNAFNK 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D L L E+A E+D L + +L+ + + + E L SGEAD N+ +LE+ Sbjct: 71 LKSNLKDALELEEMAEAENDLETLSQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA++++RMY R+AE+ FKTE + + +GEEAGIKS T+ I G AYGW Sbjct: 131 NAGAGGTESHDWASIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWF 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+++ +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQ Sbjct: 191 KTETGVHRLVRISPFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG V QCQ +RSQHKNKAQA ML+AKLYELE+QKR + N + Sbjct: 251 HVNTTDSAVRITHIPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +KT+ WG QIRSYVLQPY MVKDLRT+ E + VLDGDL++F+ A LA+ Sbjct: 311 AKTDNSWGHQIRSYVLQPYHMVKDLRTDYETSDTKGVLDGDLEEFVSAHLAM 362 >gi|186476207|ref|YP_001857677.1| peptide chain release factor 2 [Burkholderia phymatum STM815] gi|184192666|gb|ACC70631.1| peptide chain release factor 2 [Burkholderia phymatum STM815] Length = 359 Score = 278 bits (711), Expect = 9e-73, Method: Composition-based stats. Identities = 171/343 (49%), Positives = 248/343 (72%), Gaps = 1/343 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D RL +N + EDP++W + A+ L +E++ L+ + + + + L D Sbjct: 16 GGIFDYDAKSVRLIEVNKELEDPNVWNDSQHAQALGKEKKLLEGVVDVLSSLDNDLRDTK 75 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L ++A EE+D L +++ ++ VE +F + S AD N+A++++ AGAGGTE+ Sbjct: 76 DLFDMAREENDEDTLVACEEDVAKLTTRVEDMEFRRMFSNPADPNNAFIDIQAGAGGTEA 135 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA+MLLR Y R+ E++ FKTE LE +G+ AGIKSAT+ ++G AYG+L+ E G+HRL Sbjct: 136 CDWASMLLRQYLRYCERKGFKTEVLEESEGDVAGIKSATIKVEGEYAYGFLRTETGIHRL 195 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS+ RHTSFSS++VYP +D+S EIE++ +D RIDTYRASGAGGQH+N TDSAV Sbjct: 196 VRKSPFDSSGGRHTSFSSVFVYPEIDESFEIEVNPADLRIDTYRASGAGGQHINKTDSAV 255 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIP+G+VVQCQ +RSQH+N+A+A ML+++LYE E++KR+ + E+ K+++GWG Sbjct: 256 RITHIPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEMRKRQSEQDKLEAGKSDVGWGH 315 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRTN+E ++ VLDGDLD F+ A+L Sbjct: 316 QIRSYVLD-NSRIKDLRTNVEISNTKSVLDGDLDAFISASLKQ 357 >gi|57866389|ref|YP_188014.1| peptide chain release factor 2 [Staphylococcus epidermidis RP62A] gi|71153101|sp|Q8CPZ1|RF2_STAES RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|71153102|sp|Q5HQX5|RF2_STAEQ RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|57637047|gb|AAW53835.1| peptide chain release factor 2 [Staphylococcus epidermidis RP62A] Length = 371 Score = 278 bits (711), Expect = 9e-73, Method: Composition-based stats. Identities = 160/354 (45%), Positives = 228/354 (64%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + LN + G D +N + DP W + +A+ ++ + L + ++ + Sbjct: 12 EYQNHLNQIRGSLDLENKETNIQEYEEMMTDPDFWNDQTKAQDIIDKNNALKSIVNGYYQ 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + D EL EE D + E + +Q+ + +++ + + LL G D+N+A LE+ Sbjct: 72 LTNAVDDMSATRELLQEEYDEDMKIELEEEVQQFEEQIDQYELQLLLDGPHDANNAILEL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDW +MLLRMY R+ E+ FK E ++ G+EAG+KS TLLIKG NAYG+L Sbjct: 132 HPGAGGTESQDWVSMLLRMYQRYCEQNGFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGG 240 K E+GVHRLVRISP+DS+ RRHTSF+S V P +D IEIEI+ D +DT+RASGAGG Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QH+N T+SA+RITH PTG+VV Q ERSQ KN+ A ML++KLY+L+L+++E+ Sbjct: 252 QHINKTESAIRITHHPTGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQEQEMAEIR 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +IGWG QIRSYV PY M+KD RTN E V+DG++ F++A L + Sbjct: 312 GEQKDIGWGSQIRSYVFHPYSMIKDHRTNEETGKVDAVMDGEIGPFIEAYLRKE 365 >gi|85712973|ref|ZP_01044012.1| Protein chain release factor B [Idiomarina baltica OS145] gi|85693211|gb|EAQ31170.1| Protein chain release factor B [Idiomarina baltica OS145] Length = 348 Score = 278 bits (711), Expect = 9e-73, Method: Composition-based stats. Identities = 186/346 (53%), Positives = 244/346 (70%), Gaps = 1/346 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + LGG+FD+ + +RL + + E P +W + +A+ L +ER L+ I + ++ L Sbjct: 1 MRHLGGIFDYAHKKERLEEVTRELEQPEVWDDPPKAQSLGKERAALEQVIETLDNLEQGL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D L++LA+E +D + E L+ + ++E +F + S + DS+D Y+++ +G+G Sbjct: 61 EDIEGLVDLAVEAEDETTFDEAEQELKELLTQLEALEFRRMFSRDNDSSDCYVDIQSGSG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWANMLLRMY RWAE +FKTE E+ +GE AGIKSAT+ I G AYGWL+ E G Sbjct: 121 GTEAQDWANMLLRMYLRWAEAHEFKTEITELSEGEVAGIKSATVRIAGEYAYGWLRTETG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR SP+DS +RRHTSF+S+++YP VDD IEIEI+ SD RIDTYRASGAGGQHVN T Sbjct: 181 VHRLVRKSPFDSGNRRHTSFASVFIYPEVDDDIEIEINPSDLRIDTYRASGAGGQHVNRT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH PTG+VVQCQ +RSQHKNK A L+AKLYELE+QK+ E E SK +I Sbjct: 241 DSAVRITHEPTGIVVQCQSDRSQHKNKDSAMKQLKAKLYELEIQKQNEDKQALEDSKADI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 GWG QIRSYVL +KDLRT IE + VLDG LD F++A+L Sbjct: 301 GWGSQIRSYVLDD-ARIKDLRTGIENRNTQAVLDGALDPFIEASLK 345 >gi|225851497|ref|YP_002731731.1| peptide chain release factor 2 [Persephonella marina EX-H1] gi|225646418|gb|ACO04604.1| peptide chain release factor 2 [Persephonella marina EX-H1] Length = 370 Score = 278 bits (711), Expect = 9e-73, Method: Composition-based stats. Identities = 168/353 (47%), Positives = 230/353 (65%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + N + + D ++ L L+ + P W + +A+ + +R + N I I+ Sbjct: 11 QLENKFNNIKEILDPESLRGELFKLDQEMGRPDFWNDTKKAQEISSKRNAIANKIQEIES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ ++ D +EL E D E ++ + E+ + SLLS E D +A + + Sbjct: 71 VEKKINDIKEFIELLELEYDKETEDEIKREIEALDKEITKLETASLLSEEYDMKNAIVTL 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GG E+ DW MLLRMY RWAEK F E ++ + AGIKSAT ++KGP AYG+L Sbjct: 131 QAGSGGVEACDWTEMLLRMYLRWAEKNGFDVEMVDYQPDDVAGIKSATFIVKGPYAYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGEQGVHRLVRISP+D+N RRHTSFS++ V P + D +++EI E D RIDT+RASGAGGQ Sbjct: 191 KGEQGVHRLVRISPFDANKRRHTSFSAVSVIPEIGDEVKVEIKEEDLRIDTFRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRI HIPTG+ V CQ ERSQ +N+A+A ML+AKLY+ EL+K++E E Sbjct: 251 HVNTTDSAVRIVHIPTGITVSCQSERSQIQNRAKALQMLKAKLYQYELEKQKEKQKELEG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K +I WG QIRSYV QPYQMVKDLRT E + V+DGD+D F+++ L + Sbjct: 311 EKKDISWGSQIRSYVFQPYQMVKDLRTGYETGNIQAVMDGDIDPFIESYLKWR 363 >gi|7688054|emb|CAB89696.1| putative peptide release factor 2 [Xanthomonas campestris pv. campestris] Length = 374 Score = 278 bits (711), Expect = 9e-73, Method: Composition-based stats. Identities = 179/351 (50%), Positives = 242/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ ++ L G D+D +RL ++ + E P +W + A+ L RER L+ + I ++ Sbjct: 14 LNDRVLSLRGYLDYDVKKERLEEVSRELESPDVWNDAERAQALGRERSMLEKTVIGIADV 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LL+LA E D +L + + VE +F+ + SG+ D +A++++ Sbjct: 74 LAGLTDAGELLDLAESEQDEDTAVAVIADLDKYQAHVEKLEFQRMFSGQMDGANAFVDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA +LLRMY RWAE R +KTE +E+ GE AGIKSAT+ I+G AYGWLK Sbjct: 134 AGAGGTEAQDWAEILLRMYLRWAESRGWKTELMEVSGGEVAGIKSATIRIEGEYAYGWLK 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS++RRHTSF+S++V P VDD+IEI+I+ +D R D YR+SGAGGQH Sbjct: 194 TEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT VV CQ RSQH+N+ A ML AKLYELE+QKR + E++ Sbjct: 254 VNKTESAVRITHIPTNTVVACQTGRSQHQNRDNAMKMLAAKLYELEVQKRNVERDALEAT 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIR+YVL +KDLRT IE++ VLDGDLD+F++A+L Sbjct: 314 KSDIGWGSQIRNYVLD-QSRIKDLRTGIERSDTQKVLDGDLDEFVEASLKA 363 >gi|302342486|ref|YP_003807015.1| LigA [Desulfarculus baarsii DSM 2075] gi|301639099|gb|ADK84421.1| LigA [Desulfarculus baarsii DSM 2075] Length = 371 Score = 278 bits (711), Expect = 9e-73, Method: Composition-based stats. Identities = 174/353 (49%), Positives = 235/353 (66%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++L + D ++ +RL+ L+ W++ AK +MRER L ++ + Sbjct: 7 ELRQRLGVIQEYLDPESKTKRLAELDKIVGANDFWEDQNAAKAVMRERTDLAQSLEELDA 66 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D +LLELA+EEDD S+ E ++ ++ + LL G D A L + Sbjct: 67 LNRSMEDAEVLLELAVEEDDASLTAEIDQAHDALERQIGRLEAARLLGGPDDHRGAILAI 126 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGG ++QDWA ML R+Y R+AE++ F+ L+ G+EAG+KS T+ I GP AYG L Sbjct: 127 NAGAGGADAQDWAQMLTRLYGRYAERQGFQVVELDFQAGDEAGVKSVTMEINGPRAYGLL 186 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE GVHRLVRISP+D++ RRHT+F+S++V P VDD IEIE+ ++D RIDTYRASGAGGQ Sbjct: 187 KGESGVHRLVRISPFDASHRRHTAFASVYVSPQVDDDIEIEVKDADIRIDTYRASGAGGQ 246 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T SAVRITH PTGVVVQCQ E+SQH+NK A +LRA+LYELE+ KRE + Sbjct: 247 HVNKTSSAVRITHFPTGVVVQCQNEKSQHRNKDMAMKVLRARLYELEIHKREAEKREVHA 306 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 S EI WG QIRSYVL PY++VKD RT +E + VLDG LDDF++ L + Sbjct: 307 SHQEIAWGSQIRSYVLAPYRLVKDHRTGVEVGNVDSVLDGQLDDFIQGYLLWR 359 >gi|325291337|ref|YP_004267518.1| bacterial peptide chain release factor 2 (bRF-2) [Syntrophobotulus glycolicus DSM 8271] gi|324966738|gb|ADY57517.1| bacterial peptide chain release factor 2 (bRF-2) [Syntrophobotulus glycolicus DSM 8271] Length = 371 Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 162/351 (46%), Positives = 228/351 (64%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L L D ++ L + P W + A+ +M+E + ++ E+ Sbjct: 12 LVARLADLRVSLDVPAREVKIGQLEEELNRPDFWDDRSNAQKIMQELTGNKDKVALFGEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D +L ++A+EEDD S+ E ++ RI+ + + + E LLSGE D N+A + +H Sbjct: 72 KTETEDLEVLWQMAMEEDDSSLEDEIVKDIHRIRAQYDELELEILLSGEYDRNNAIITLH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTE+QDW ML RMY RW E+R++K E L++ GEEAGIKS T + G NA+G+ K Sbjct: 132 SGAGGTEAQDWVQMLYRMYLRWGERRRYKVETLDLLPGEEAGIKSVTFSLAGENAFGYAK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS+ RRHTSF+S+ V P V++ +EI I D ++DTYR+ GAGGQH Sbjct: 192 CEKGVHRLVRISPFDSSGRRHTSFASVDVIPEVNEDMEINIDSEDLKVDTYRSGGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSAVRITHIP+G++VQCQ ERSQ +N+A +L+AKL EL+ +++EE Sbjct: 252 VNKTDSAVRITHIPSGIIVQCQSERSQIQNRAYCMRILQAKLLELKRKQQEEELLEIRGE 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +I WG QIRSYV PY MVKD RTN E + + V+DG++D F+ A L Sbjct: 312 LNDIAWGSQIRSYVFHPYSMVKDHRTNTETGNVNSVMDGEIDLFISAYLKQ 362 >gi|188997267|ref|YP_001931518.1| peptide chain release factor 2 [Sulfurihydrogenibium sp. YO3AOP1] gi|229576671|sp|B2V5M0|RF2_SULSY RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|188932334|gb|ACD66964.1| peptide chain release factor 2 [Sulfurihydrogenibium sp. YO3AOP1] Length = 369 Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 178/353 (50%), Positives = 240/353 (67%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + + L + + + + L+ DP+ W + +A+ + R +L + I Sbjct: 12 EIKEKWDNLKEILKPEKLEEEIKQLDDLMADPNFWNDTKKAQEISSRRNYLGEKLEEILT 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + ++ + L + L E+D + E L+ I+ E+ + SLLS E DS +A L V Sbjct: 72 VDKKVNNLLDYITLLEMEEDQELYNEVEKELKEIEKEISRLELGSLLSDEMDSKNAILTV 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GG E+ DW MLLRMYTRWAEKR ++ E ++ + AG+KSATL+IKGP AYG+L Sbjct: 132 QAGSGGVEACDWTEMLLRMYTRWAEKRGYQVELVDFQPDDVAGVKSATLIIKGPYAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGEQGVHRLVRISP+D+N RRHTSFS++ V P +D+ I++EI+E D RIDTYRASGAGGQ Sbjct: 192 KGEQGVHRLVRISPFDANKRRHTSFSAVSVIPEIDEDIKVEINEEDLRIDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVRITHIPTG+VV CQ ERSQ +NK +A NML+AKLY+LEL+KR+E E Sbjct: 252 HVNKTDSAVRITHIPTGIVVACQSERSQLQNKLKATNMLKAKLYQLELEKRKEKQKELEG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K +I WG QIRSYV QPYQMVKDLRT E + V+DG++DDF+++ L K Sbjct: 312 EKKDITWGSQIRSYVFQPYQMVKDLRTGFETGNIEAVMDGEIDDFIESYLKWK 364 >gi|237745578|ref|ZP_04576058.1| peptide chain release factor 2 [Oxalobacter formigenes HOxBLS] gi|229376929|gb|EEO27020.1| peptide chain release factor 2 [Oxalobacter formigenes HOxBLS] Length = 349 Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 173/344 (50%), Positives = 239/344 (69%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD+ +L +N + EDP +W + +A+ L RE++ L+N + + I+ L D Sbjct: 5 YGGIFDFAAKSDKLEQVNAELEDPAVWNDPKKAQELGREKKSLENVVLSLSHIKSALTDA 64 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L E+A EE D L+ ++ ++ +E +F + S D + ++++ AGAGGTE Sbjct: 65 GELFEMAKEEQDDETLKAVEADVSELQDRIEKLEFRRMFSNPMDPCNCFVDIQAGAGGTE 124 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA+M+LR Y R+ E++ F LE DGE AGIK+AT+ ++G AYG+L+ E GVHR Sbjct: 125 AQDWASMILRQYLRYCERKGFNATILEQSDGEIAGIKTATIKVEGDYAYGYLRTETGVHR 184 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS + RHTSF S++VYP VDDSIEI+I+ +D R+DTYRASGAGGQH+N TDSA Sbjct: 185 LVRKSPFDSANGRHTSFCSLFVYPEVDDSIEIDINPADVRVDTYRASGAGGQHINKTDSA 244 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+THIPTG+VVQCQ +RSQH+N+A AW ML+++LYELEL+KR E SKT++GWG Sbjct: 245 VRLTHIPTGIVVQCQNDRSQHRNRADAWEMLKSRLYELELRKRMAEQQKLEDSKTDVGWG 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT+ E + VLDGDLDDF+ +L Sbjct: 305 HQIRSYVLD-SSRIKDLRTSHETGNTKAVLDGDLDDFIIESLKQ 347 >gi|313201599|ref|YP_004040257.1| peptide chain release factor 1 [Methylovorus sp. MP688] gi|312440915|gb|ADQ85021.1| peptide chain release factor 1 [Methylovorus sp. MP688] Length = 347 Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 176/344 (51%), Positives = 245/344 (71%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD++ QRL ++ EDP +W + ++ L +ER+ L+ + + E+ + L D+ Sbjct: 3 FGGIFDFETKQQRLEEVSQLLEDPSIWNDNERSQKLGKERRELEFVVKSLTEVDNSLRDS 62 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L E+A EE+D + L + + ++ +VE +F + + D N+ ++++ +G+GGTE Sbjct: 63 AELFEMAREENDDATLLGIDADSKALEKQVEEMEFRRMFANPMDGNNCFIDIQSGSGGTE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA+MLLRMY R+ E+R FK E LE +G+ AG+KSA+L I G AYG+L+ E GVHR Sbjct: 123 AQDWASMLLRMYLRYCERRGFKVEVLEESEGDVAGLKSASLKISGDYAYGYLRTESGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS +RRHTSF+S+ V+P VDDSIE+EI+ +D RIDTYRASGAGGQH+N TDSA Sbjct: 183 LVRKSPFDSGNRRHTSFASVSVFPEVDDSIEVEINPADLRIDTYRASGAGGQHINKTDSA 242 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT VVQCQ +RSQH+NKA+A NML+A+LY+LEL KR + E +KT+IGWG Sbjct: 243 VRITHLPTNTVVQCQNDRSQHRNKAEAMNMLKAQLYQLELNKRNQEKQALEDAKTDIGWG 302 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRTN+E + VLDGDLD F+ +L Sbjct: 303 HQIRSYVLD-QSRIKDLRTNVEIGNTQGVLDGDLDPFISESLKQ 345 >gi|159043721|ref|YP_001532515.1| peptide chain release factor 2 [Dinoroseobacter shibae DFL 12] gi|157911481|gb|ABV92914.1| peptide chain release factor 2 [Dinoroseobacter shibae DFL 12] Length = 375 Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 192/352 (54%), Positives = 246/352 (69%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L+ L D++ A RL + EDP+LW + A+ LMR+RQ L +A+ + I Sbjct: 12 IRKSLDLLAQRLDYETAPHRLEEFDAMIEDPNLWNDQARAQKLMRDRQMLVDAMKTYEGI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L DN+ L+EL E D ++ + + L+ + K+ E+LL GEAD ND +LE++ Sbjct: 72 KQELEDNIELIELGEMEADAEVVTDAEEALKSLAETAAKKEIEALLDGEADGNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTES DWA+ML RMY RWAE + + E GEEAGIKSA I GPNAYGWLK Sbjct: 132 SGAGGTESCDWASMLARMYVRWAEAKGYTVELQSQSPGEEAGIKSAAYKISGPNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIE++ +D RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEVNPADIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+V E+SQH+N+ A L+++LY++EL +R N + Sbjct: 252 VNTTDSAVRITHVPTGIVTTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHEA 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K + GWG QIRSYVLQPYQMVKDLRT E + + VLDGDLD M ATLA + Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTGYETSDTAGVLDGDLDGLMSATLAQQ 362 >gi|295707157|ref|YP_003600232.1| peptide chain release factor 2 [Bacillus megaterium DSM 319] gi|294804816|gb|ADF41882.1| peptide chain release factor 2 [Bacillus megaterium DSM 319] Length = 326 Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 169/323 (52%), Positives = 219/323 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP+ W + A+ ++ E L +A++ + + + + EL EE D + +E Sbjct: 1 MSDPNFWNDQQAAQTVINEANGLKDAVNQFNHLDETYENLQVSYELVKEEYDEDLAEELV 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L+ + + + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEK+ Sbjct: 61 SELKELISGMNDFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + P +D I I+I D ++DTYRASGAGGQH+NTTDSAVRITH+PT VVV CQ ERSQ Sbjct: 181 DIMPEFNDEISIDIRTEDLKVDTYRASGAGGQHINTTDSAVRITHLPTNVVVSCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML++KLY+LE++K++E + +IGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNREQAMKMLKSKLYQLEIEKQQEQLAEIRGEQKDIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E + V+DGDLD F+ A L Sbjct: 301 TEVGNTQSVMDGDLDPFIDAYLR 323 >gi|145589652|ref|YP_001156249.1| peptide chain release factor 2 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048058|gb|ABP34685.1| bacterial peptide chain release factor 2 (bRF-2) [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 349 Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 167/346 (48%), Positives = 244/346 (70%), Gaps = 1/346 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD+D +RL+ +N+ EDP +W + +A+ L +E++ LD ++ + ++ + Sbjct: 3 KHFGGIFDFDVKSRRLTEVNSILEDPTIWDDQKKAQALGKEKKLLDGVVATLTDLNTNIT 62 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + L ++A EE D + ++Q + +F + E DS + ++++ AGAGG Sbjct: 63 GAIELFDMAKEESDFETIAAIEQDVQSYSKLIGDLEFRRMFHNEMDSCNCFIDIQAGAGG 122 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DWA+ML R Y ++ E++ +KTE LE DG+ AGIKSAT+ + G AYG L+ E GV Sbjct: 123 TEACDWASMLYRQYLKYCERKGYKTEILEESDGDVAGIKSATIKVDGEYAYGHLRSETGV 182 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS++ RHTSF+SI+VYP +DDSIEI+++ +D R DTYRASGAGGQH+N TD Sbjct: 183 HRLVRKSPFDSSNGRHTSFASIYVYPEIDDSIEIDVNPADIRTDTYRASGAGGQHINKTD 242 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE E+QKR + E+SKT++G Sbjct: 243 SAVRLTHLPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHEMQKRRAEQDKLEASKTDVG 302 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 303 WGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDAFIEASLKQ 347 >gi|163784774|ref|ZP_02179571.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1] gi|159879956|gb|EDP73663.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1] Length = 348 Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 169/340 (49%), Positives = 232/340 (68%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + ++ Q+L L+ P W + +A+ + ER +L + + + I++++ +E Sbjct: 2 NLEDIKQKLKELDEIMSSPDFWNDQKKAQKISAERTYLSDKLEKLNNIEEKINYLEEYIE 61 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 L E D Q+ + ++ ++ + + ESLLSGE DS +A + V AG+GG E+ DWA Sbjct: 62 LLELEPDEEAKQDLENEIKNLETLINKFEVESLLSGEYDSKNAIVSVQAGSGGVEACDWA 121 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 MLLRMY RWAEK + E ++ + AGIKSAT ++KGP AYG+L+GEQGVHRLVRIS Sbjct: 122 EMLLRMYLRWAEKNGYNVEIVDYQPDDVAGIKSATFIVKGPYAYGYLQGEQGVHRLVRIS 181 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+DSN RRHTSF+++ V P + + I++EI+E D RIDT+RASGAGGQHVN TDSAVRITH Sbjct: 182 PFDSNKRRHTSFAAVSVIPEIGEEIKVEINEDDLRIDTFRASGAGGQHVNKTDSAVRITH 241 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 IPTG+VV CQ ERSQ +N+A+A ML+AKLY+LE++K++E E K EI WG QIRS Sbjct: 242 IPTGIVVSCQSERSQIQNRAKAMQMLKAKLYQLEIEKQKEKRKELEGEKKEISWGSQIRS 301 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 YV PYQMVKDLRT E + V+DG++D FM+ L K Sbjct: 302 YVFHPYQMVKDLRTGYETGNIQAVMDGEIDSFMETYLKYK 341 >gi|307723715|ref|YP_003903466.1| hypothetical protein Thet_0528 [Thermoanaerobacter sp. X513] gi|307580776|gb|ADN54175.1| hypothetical protein Thet_0528 [Thermoanaerobacter sp. X513] Length = 368 Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 165/350 (47%), Positives = 233/350 (66%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 ++ +G D ++ + + ++ K DP W ++ +++ L ++++ L + + Sbjct: 14 EEIKEMGVSLDIESVKREIEEIDKKMSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVS 73 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 + D L+EL LEE D SI E + +K ++E + ++LL+G D N+A L +HAG Sbjct: 74 KWEDLSTLIELGLEEGDESITDEVDKEYKELKKKLEDLKIKTLLNGLYDKNNAILSIHAG 133 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 +GGTE+QDWA MLLRMYTRWA + F+ E L+ GEEAGIKS TL+IKGP AYG+LK E Sbjct: 134 SGGTEAQDWAEMLLRMYTRWANDKGFEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSE 193 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHRLVRISP+D+ RRHTSF+ + V P +++ IE+EI D +IDTYRASGAGGQ+VN Sbjct: 194 AGVHRLVRISPFDAAGRRHTSFALVEVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVN 253 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T+SAVRITH+PTG+VV CQ ERSQ +N+ A ML+AKL +L +++++E + Sbjct: 254 KTESAVRITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHR 313 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 E WG QIRSYV QPY +VKD RTN E + V+DG++D F+ A L K Sbjct: 314 EAAWGNQIRSYVFQPYTLVKDHRTNYEVGNVQAVMDGEIDGFINAYLKQK 363 >gi|167748494|ref|ZP_02420621.1| hypothetical protein ANACAC_03238 [Anaerostipes caccae DSM 14662] gi|317471975|ref|ZP_07931307.1| peptide chain release factor 2 protein [Anaerostipes sp. 3_2_56FAA] gi|167652486|gb|EDR96615.1| hypothetical protein ANACAC_03238 [Anaerostipes caccae DSM 14662] gi|316900379|gb|EFV22361.1| peptide chain release factor 2 protein [Anaerostipes sp. 3_2_56FAA] Length = 367 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 179/350 (51%), Positives = 236/350 (67%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 L L G + +R+ L E P W+++ E++ ++RE + L + + + ++ Sbjct: 15 REPLEKLSGSLGLEEKKERIEQLELDMEAPGFWEDLEESQKVVREVKGLKDQVEGYEGLK 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D L+E+A EE+D + ET + + E + +LLSGE D N+A L +HA Sbjct: 75 GQFEDIETLIEMASEEEDEELAAETQEAFAEFETAYENLRISTLLSGEYDKNNAILSLHA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTES DWA ML RMYTRWA K+ F+T+ ++ DG+EAGIKS T+ IKG NAYG+L+ Sbjct: 135 GAGGTESCDWAGMLYRMYTRWAGKKGFETKVIDYLDGDEAGIKSVTVEIKGENAYGYLRS 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+++ +R TSF+S V P +D+ + +EI++ D RIDTYRASGAGGQH+ Sbjct: 195 ERGVHRLVRISPFNAAGKRQTSFASCDVMPEIDEDLNVEIADEDIRIDTYRASGAGGQHI 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N TDSA+RITHIPTG+VVQCQ ERSQHKNK QA ML+ KLY L+ Q+ E + Sbjct: 255 NKTDSAIRITHIPTGIVVQCQNERSQHKNKDQAMKMLKTKLYLLKEQQHLEKLSDIRGDV 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + GWG QIRSYVLQPY MVKD RTN E +PS VLDGDLD FM A LA Sbjct: 315 GDNGWGSQIRSYVLQPYTMVKDHRTNKESGNPSAVLDGDLDGFMNAYLAW 364 >gi|331007552|ref|ZP_08330709.1| tRNA pseudouridine synthase D, TruD [gamma proteobacterium IMCC1989] gi|330418642|gb|EGG93151.1| tRNA pseudouridine synthase D, TruD [gamma proteobacterium IMCC1989] Length = 347 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 172/345 (49%), Positives = 242/345 (70%), Gaps = 1/345 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 CLGG+FD+D ++L+ + + +P +W + A+ L +ER L+ + I+ + + D Sbjct: 2 CLGGIFDYDAKQEQLAEVELELAEPEVWNDPARAQALGQERASLEAIVGTIQTLDTGVVD 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 LL++A+EE D SIL + D + + ++ +F + SGE D+N+AYL++ +G+GGT Sbjct: 62 ARELLDMAVEEGDESILIDVQDEIDVLSAQLGKLEFRRMFSGETDANNAYLDIQSGSGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+QDWA M+LRMY RW E R FKT E G+ AGIKSAT+ +G A+GWL+ E GVH Sbjct: 122 EAQDWAEMVLRMYLRWGEARGFKTTLEEASAGDVAGIKSATIRFEGEYAFGWLRTETGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVR SP+DS+SRRHTSF S++V P +DD+ E+++ +S+ R DTYRASGAGGQHVN TDS Sbjct: 182 RLVRKSPFDSSSRRHTSFCSVFVSPEIDDNFEVDVDKSEVREDTYRASGAGGQHVNKTDS 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+TH +G+VVQCQ +RSQH+N+ AW MLRA+LYE ELQ+R E +K++IGW Sbjct: 242 AVRLTHEASGIVVQCQSQRSQHQNRDTAWKMLRARLYEQELQRRNADKQAQEDNKSDIGW 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 G QIRSYVL +KDLRTN++ ++ VLDG LD F++A+L Sbjct: 302 GSQIRSYVLDDQ-RIKDLRTNVQTSNCQAVLDGSLDQFIEASLKA 345 >gi|304414309|ref|ZP_07395677.1| peptide chain release factor 2 [Candidatus Regiella insecticola LSR1] gi|304283523|gb|EFL91919.1| peptide chain release factor 2 [Candidatus Regiella insecticola LSR1] Length = 344 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 178/342 (52%), Positives = 241/342 (70%), Gaps = 1/342 (0%) Query: 12 GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 G+FD+D +RL ++ + E P +W A+ L +ER L+ + I++++ +L D Sbjct: 2 GIFDYDVKQERLEEVSAELEQPDVWNKPEYAQQLGKERSTLEAIVLTIQQLERQLADVNG 61 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LL+LA+EE+D + E L+ ++ + +F + SGE DS + YL++ AG+GGTE+Q Sbjct: 62 LLDLAVEENDEATFNEVLAELKAVENNLIQLEFRRMFSGEYDSANCYLDLQAGSGGTEAQ 121 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWANMLLRMY RWA+ + F+TE ++ DG+ AG+KSAT+ I G A+GWL+ E GVHRLV Sbjct: 122 DWANMLLRMYLRWADAKGFQTEIIDSSDGDVAGLKSATIKIIGDYAFGWLRTETGVHRLV 181 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS +VYP +DD + IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 182 RKSPFDSGGRRHTSFSSAFVYPEIDDKVNIEINPADLRIDVYRASGAGGQHVNKTESAVR 241 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ + E +K++IGWG Q Sbjct: 242 ITHIPTNIVTQCQNDRSQHKNKDQAMQQLKAKLYEFEMQKKNADKQLQEDNKSDIGWGSQ 301 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 IRSYVL +KDLRTN+E + VLDGDLD F++A+L Sbjct: 302 IRSYVLDD-ARIKDLRTNVETRNTQAVLDGDLDKFIEASLKA 342 >gi|237755833|ref|ZP_04584431.1| peptide chain release factor 2 [Sulfurihydrogenibium yellowstonense SS-5] gi|237691998|gb|EEP61008.1| peptide chain release factor 2 [Sulfurihydrogenibium yellowstonense SS-5] Length = 369 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 176/353 (49%), Positives = 240/353 (67%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + + L + + + + L+ DP+ W + +A+ + R +L + I Sbjct: 12 EIKEKWDNLKEILKPEKLEEEIKQLDDLMADPNFWNDTKKAQEISSRRNYLGEKLEEILT 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + +++ + L + L E+D + E L+ I+ E+ + SLLS E DS +A L V Sbjct: 72 VDEKINNLLDYITLLEMEEDQELYNEVEKELKEIEKEISRLELGSLLSDEMDSKNAILTV 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GG E+ DW MLLRMYTRWAEKR ++ E ++ + AG+KSAT++IKGP AYG+L Sbjct: 132 QAGSGGVEACDWTEMLLRMYTRWAEKRGYQVELVDFQPDDVAGVKSATVIIKGPYAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGEQGVHRLVRISP+D+N RRHTSFS++ V P +D+ I++EI+E D RIDTYRA GAGGQ Sbjct: 192 KGEQGVHRLVRISPFDANKRRHTSFSAVSVIPEIDEDIKVEINEEDLRIDTYRAGGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVRITHIPTG+VV CQ ERSQ +NK +A NML+AKLY+LEL+KR+E E Sbjct: 252 HVNKTDSAVRITHIPTGIVVACQSERSQLQNKLKAMNMLKAKLYQLELEKRKEKQKELEG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K +I WG QIRSYV QPYQMVKDLRT E + V+DG++DDF+++ L K Sbjct: 312 EKKDITWGSQIRSYVFQPYQMVKDLRTGFETGNIEAVMDGEIDDFIESYLKWK 364 >gi|56421641|ref|YP_148959.1| peptide chain release factor 2 in translation [Geobacillus kaustophilus HTA426] gi|56381483|dbj|BAD77391.1| peptide chain release factor 2 in translation [Geobacillus kaustophilus HTA426] Length = 327 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 169/325 (52%), Positives = 224/325 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P+ W + A+ ++ E L + + +++R + + EL EE D + E Sbjct: 1 MAAPNFWDDQKSAQAVISEANALKDLVEEFSSLEERFDNLEVTYELLKEEPDDELQAELV 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +++ + + + LL+ D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEK+ Sbjct: 61 EEAKKLMKDFSEFELQLLLNEPYDQNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ GEEAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S Sbjct: 121 FKVETLDYLPGEEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEIEI + +IDTYR+SGAGGQHVNTTDSAVRITH+PTG+VV CQ ERSQ Sbjct: 181 EVVPELDDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A NML+AKLY+ +L++++ + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNREKAMNMLKAKLYQKKLEEQQAELAELRGEQKEIGWGNQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DG++D F+ A L K Sbjct: 301 VEVGNVQAVMDGEIDVFIDAYLRAK 325 >gi|229586524|ref|YP_002845025.1| peptide chain release factor 2 [Rickettsia africae ESF-5] gi|259585246|sp|C3PMX2|RF2_RICAE RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|228021574|gb|ACP53282.1| Peptide chain release factor RF-2 [Rickettsia africae ESF-5] Length = 368 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 188/352 (53%), Positives = 249/352 (70%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + L L D + + +RL+ L T DP LW + A+ L+RE+ +L+ ++ + Sbjct: 11 KIEQSLELLWRSLDVEASTERLNALEELTADPSLWNDQANAQKLLREKSNLEEKLNAFNK 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D L L E+A E+D L + +L+ + + + E L SGEAD N+ +LE+ Sbjct: 71 LKSNLKDALELEEMAEAENDLETLSQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA++++RMY R+AE+ FKTE + + +GEEAGIKS T+ I G AYGW Sbjct: 131 NAGAGGTESHDWASIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWF 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+++ +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQ Sbjct: 191 KTETGVHRLVRISPFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG V QCQ +RSQHKNKAQA ML+AKLYELE+QKR + N + Sbjct: 251 HVNTTDSAVRITHIPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +KT+ WG QIRSYVLQPY MVKDLRT+ E + VLDGDL++F+ A LA+ Sbjct: 311 TKTDNSWGHQIRSYVLQPYHMVKDLRTDYETSDTKGVLDGDLEEFVSANLAM 362 >gi|294501808|ref|YP_003565508.1| peptide chain release factor 2 [Bacillus megaterium QM B1551] gi|294351745|gb|ADE72074.1| peptide chain release factor 2 [Bacillus megaterium QM B1551] Length = 326 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 169/323 (52%), Positives = 219/323 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP+ W + A+ ++ E L +A++ + + + + EL EE D + +E Sbjct: 1 MADPNFWNDQQAAQTVINEANGLKDAVNQFNHLDETYENLQVSYELVKEEYDEDLAEELV 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L+ + + + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEK+ Sbjct: 61 SELKELISGMNDFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + P +D I I+I D ++DTYRASGAGGQH+NTTDSAVRITH+PT VVV CQ ERSQ Sbjct: 181 DIMPEFNDEISIDIRTEDLKVDTYRASGAGGQHINTTDSAVRITHLPTNVVVSCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML++KLY+LE++K++E + +IGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNREQAMKMLKSKLYQLEIEKQQEQLAEIRGEQKDIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E + V+DGDLD F+ A L Sbjct: 301 TEVGNTQSVMDGDLDPFIDAYLR 323 >gi|30249212|ref|NP_841282.1| peptide chain release factor 2 [Nitrosomonas europaea ATCC 19718] gi|30180531|emb|CAD85140.1| Peptide chain release factor 2 [Nitrosomonas europaea ATCC 19718] Length = 347 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 177/343 (51%), Positives = 243/343 (70%), Gaps = 1/343 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D RL+ L ++EDP +W + A+ + RE++ L+N + ++ + +L D Sbjct: 4 GGIFDFDAKQIRLTELERQSEDPAIWNDPDRAQEMGREKKSLENIVHTLQSVDRQLRDTH 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LL++A EE+D LQ +D++ + + +F + S D N+ ++++ +G+GGTE+ Sbjct: 64 ELLQIAQEENDKETLQSIADDVTELDQTLAGMEFRRMFSDPMDPNNCFVDIQSGSGGTEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA+ML RMY R+ E+R E LE G+ AGIKSATL I G AYG+L+ E GVHRL Sbjct: 124 QDWASMLERMYLRYCERRGLGVELLEESPGDVAGIKSATLKISGEYAYGYLRTETGVHRL 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS +RRHTSF+S++VYP VDDSIEI+I+ +D R+DT+RASGAGGQH+N TDSAV Sbjct: 184 VRKSPFDSGNRRHTSFASVFVYPEVDDSIEIDINPADLRVDTFRASGAGGQHINKTDSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIPTG+VVQCQ RSQH+N+A A +L+++LYE EL+KR E E SKT+I WG Sbjct: 244 RITHIPTGIVVQCQSGRSQHRNRADAMTVLKSRLYEAELRKRNETKQAIEDSKTDIAWGH 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRTNIE + VLDGDLD F++A+L Sbjct: 304 QIRSYVLD-QSRIKDLRTNIEIGNTQAVLDGDLDTFIEASLKQ 345 >gi|292669366|ref|ZP_06602792.1| peptide chain release factor RF2 [Selenomonas noxia ATCC 43541] gi|292649001|gb|EFF66973.1| peptide chain release factor RF2 [Selenomonas noxia ATCC 43541] Length = 368 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 175/352 (49%), Positives = 234/352 (66%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L+ + + ++++ L K +P W + A+ L +E L + +++ Sbjct: 12 LGEKLDQMRISLEIPAKEEKIAELEYKMGEPSFWDDAAAAQKLNQELADLKGGVDTYRDL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L E+ +EE+D S+ + L I +E Q E LLSGE D+NDA L +H Sbjct: 72 VAKYEDAETLYEMGIEENDASMEADIRAELTLISEGLETLQLEVLLSGEYDANDAILTLH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDW MLLRMY RWAE+ F + ++ G+EAG+KSATL IKG NAYG+LK Sbjct: 132 AGAGGTEAQDWTQMLLRMYGRWAERHGFTVDTADLQPGDEAGVKSATLFIKGHNAYGFLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS +RRHTSFS+ V P +DD++E+ I+ D R+D +RASGAGGQH Sbjct: 192 SEKGVHRLVRISPFDSQARRHTSFSACDVMPEIDDAVEVPINMDDVRVDYFRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T SAVR+TH PTG+VVQCQ ERSQ +NK Q MLRAKL+ELE +K+EE E Sbjct: 252 INKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCLKMLRAKLFELEQEKKEEEIARLEGV 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +I WG QIRSYV QPY MVKD+RTN E + V+DGD+D F++A L K Sbjct: 312 QQKIEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGDIDPFIRAYLNAK 363 >gi|300913271|ref|ZP_07130588.1| hypothetical protein Teth561_PD0069 [Thermoanaerobacter sp. X561] gi|300889956|gb|EFK85101.1| hypothetical protein Teth561_PD0069 [Thermoanaerobacter sp. X561] Length = 368 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 167/356 (46%), Positives = 236/356 (66%), Gaps = 3/356 (0%) Query: 2 KLSRQLNCLGG---LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58 ++S + + LFD ++ + + ++ K DP W ++ +++ L ++++ L + Sbjct: 8 EVSNMIEEIKKWGFLFDIESVKREIEEIDKKMSDPAFWSDIKKSQELAKKQKALKELLEE 67 Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 + + D L+EL LEE D SI E + +K ++E + ++LL+G D N+A Sbjct: 68 YNSLVSKWEDLSTLIELGLEEGDESITDEVDKEYKELKKKLEDLKIKTLLNGLYDKNNAI 127 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 L +HAG+GGTE+QDWA MLLRMYTRWA + F+ E L+ GEEAGIKS TL+IKGP AY Sbjct: 128 LSIHAGSGGTEAQDWAEMLLRMYTRWANDKGFEVETLDYLQGEEAGIKSVTLMIKGPFAY 187 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G+LK E GVHRLVRISP+D+ RRHTSF+ + V P +++ IE+EI D +IDTYRASGA Sbjct: 188 GYLKSEAGVHRLVRISPFDAAGRRHTSFALVEVLPELENDIEVEIRPEDLKIDTYRASGA 247 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ+VN T+SAVRITH+PTG+VV CQ ERSQ +N+ A ML+AKL +L +++++E Sbjct: 248 GGQYVNKTESAVRITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLDLMMKEKKEKIED 307 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + E WG QIRSYV QPY +VKD RTN E + V+DG++D F+ A L K Sbjct: 308 LKGEHREAAWGNQIRSYVFQPYTLVKDHRTNYEVGNVQAVMDGEIDGFINAYLKQK 363 >gi|302385044|ref|YP_003820866.1| hypothetical protein Closa_0615 [Clostridium saccharolyticum WM1] gi|302195672|gb|ADL03243.1| hypothetical protein Closa_0615 [Clostridium saccharolyticum WM1] Length = 377 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 172/350 (49%), Positives = 239/350 (68%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + L + D DN ++R+ L+ E+P W++ ++ +++ ++L + + +E++ Sbjct: 15 EKPLVEVRDSLDLDNKLKRIDELDKSMEEPGFWEDPEKSAKIVQLAKNLKDTVQSYQELE 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D +++E+ EE+D S++ E + L+ K +E + +LLSGE DS++A L ++A Sbjct: 75 RQYEDIGVMIEMGNEENDPSLVPEVEEMLREFKESLESMRINTLLSGEYDSDNAILRLNA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTES DW ML RM+ RWAEK+ F E L+ DGEEAGIKS T+ I GPNAYG+LK Sbjct: 135 GAGGTESCDWCGMLYRMFCRWAEKKGFSLEVLDYLDGEEAGIKSVTVQINGPNAYGYLKS 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+++ +R TSF S V P +++ +++EI+E D RIDTYR+SGAGGQH+ Sbjct: 195 EKGVHRLVRISPFNAAGKRQTSFVSCDVMPDIEEDLDVEINEEDLRIDTYRSSGAGGQHI 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SA+RITH+PTG+VVQCQ ERSQ +NK +A ML+AKLY L+ Q+ E + Sbjct: 255 NKTSSAIRITHLPTGIVVQCQNERSQFQNKDKAMQMLKAKLYMLKQQENAEKLSGIRGDV 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 TEIGWG QIRSYVLQPY MVKD RTN E + VLDG LD FM A L Sbjct: 315 TEIGWGNQIRSYVLQPYTMVKDHRTNAETGNVGSVLDGSLDQFMYAYLRW 364 >gi|187478021|ref|YP_786045.1| peptide chain release factor 2 [Bordetella avium 197N] gi|123515203|sp|Q2L224|RF2_BORA1 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|115422607|emb|CAJ49132.1| peptide chain release factor 2 [Bordetella avium 197N] Length = 367 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 171/350 (48%), Positives = 247/350 (70%), Gaps = 1/350 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + + L D+D +RL +N + EDP +W + A+ L RE++ L++ + + E+ Sbjct: 17 AEREQALRRYLDYDAKTERLHVVNAELEDPAVWNDPKHAQDLGREKKSLEDVVQTLTELG 76 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D L L ELA ++D + L+ ++ + +E +F + S AD + +L++ A Sbjct: 77 QGVADALELFELAAADEDDATLESIENDANTFQERLEGLEFRRMFSNPADPLNCFLDIQA 136 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+QDWA+MLLR Y ++AE++ FK E LE +GE AGIKSAT+ ++G A+G+L+ Sbjct: 137 GAGGTEAQDWASMLLRQYLKYAERKGFKAEVLEESEGEIAGIKSATIKLEGEYAFGYLRT 196 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS+ RHTSF+S++VYP VD+S E+E++ +D R+DTYRASGAGGQH+ Sbjct: 197 ETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRVDTYRASGAGGQHI 256 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N TDSAVRITH+P+G+VVQCQ +RSQH+N+A+A ML++KLYELE++KR E SK Sbjct: 257 NKTDSAVRITHMPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRKRMAEQQKLEDSK 316 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 T++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 317 TDVGWGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQ 365 >gi|312130867|ref|YP_003998207.1| bacterial peptide chain release factor 2 (brf-2) [Leadbetterella byssophila DSM 17132] gi|311907413|gb|ADQ17854.1| bacterial peptide chain release factor 2 (bRF-2) [Leadbetterella byssophila DSM 17132] Length = 358 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 156/352 (44%), Positives = 227/352 (64%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ L G+FD+DN ++L L + P W + A+ +++E Q L N +E Sbjct: 9 LRARVTALRGIFDYDNRKEKLGDLENQQAQPEFWNDSDHAQTVVKEIQVLKNWTEAYEEA 68 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + D L E E + ++ +E + + +LS E D A +E++ Sbjct: 69 EASISDLETLFEFYQEGEVEEEE--VDTEAKKTVQIIEELELKKMLSSEEDQFSAIIEIN 126 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDWA+ML RMY WA+K +K ++ DG+ AGIKSA++ I GP AYG+LK Sbjct: 127 SGAGGTESQDWASMLYRMYLMWAQKHGYKVTQVDWTDGDGAGIKSASMQIDGPLAYGYLK 186 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DSN+RRHTSF+S++ YP+VDD+IE+E+ ++D T R+ GAGGQ+ Sbjct: 187 SENGVHRLVRISPFDSNARRHTSFASVYAYPLVDDTIEVEVKDADIEWQTSRSGGAGGQN 246 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++ V++TH PTG+V+ CQ ERSQ NK A NML+++LY++EL+KR E+S Sbjct: 247 VNKVETKVQLTHKPTGIVIVCQIERSQLANKEHAMNMLKSRLYQIELEKRNAARADIEAS 306 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K +I WG QIR+YV PY++VKD RT E + V+DG++DDF+KA L + Sbjct: 307 KKKIEWGSQIRNYVFHPYKLVKDARTGHETSDIQRVMDGEIDDFIKAYLMLD 358 >gi|254555779|ref|YP_003062196.1| peptide chain release factor 2 [Lactobacillus plantarum JDM1] gi|300767562|ref|ZP_07077472.1| peptide chain release factor RF2 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308179754|ref|YP_003923882.1| peptide chain release factor 2 [Lactobacillus plantarum subsp. plantarum ST-III] gi|254044706|gb|ACT61499.1| peptide chain release factor 2 [Lactobacillus plantarum JDM1] gi|300494547|gb|EFK29705.1| peptide chain release factor RF2 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045245|gb|ADN97788.1| peptide chain release factor 2 [Lactobacillus plantarum subsp. plantarum ST-III] Length = 357 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 170/347 (48%), Positives = 220/347 (63%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 LGG FD D + + + +P W + A+ ++ E L K++ D + Sbjct: 4 TTLGGRFDLDALNESIQENEARMAEPGFWDDQAAAQKVIDENNVLKGKYDTFKQLADEVG 63 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D + EL EE D + E + Q + +++ + LL G D N+A LE+H GAGG Sbjct: 64 DLAVAYELLSEEPDAEMQAEFETDFQHAEHDLQQYRLNLLLDGPYDRNNAILEIHPGAGG 123 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TESQDW MLLRMYTRWA FK E ++ G+EAGIKS TLLI G NAYG+L+ E+GV Sbjct: 124 TESQDWGAMLLRMYTRWAASHNFKVETVDYQAGDEAGIKSVTLLISGHNAYGYLRSEKGV 183 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVRISP+D+ RRHTSF+S+ V P +DD+++++I D +ID YRASGAGGQHVN T Sbjct: 184 HRLVRISPFDAAGRRHTSFASVDVMPELDDTVDVDIRPEDLKIDVYRASGAGGQHVNKTS 243 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VV Q +RSQ +N+ A NMLRAKLYE E +K+ + + + +IG Sbjct: 244 SAVRITHVPTGIVVASQAQRSQLQNRQTALNMLRAKLYEREEEKKAKERAAIQGEQMDIG 303 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYV PY MVKD RTN E V+DGDLD FM A L K Sbjct: 304 WGSQIRSYVFHPYTMVKDHRTNYESHDGQAVMDGDLDPFMDAYLQWK 350 >gi|298370446|ref|ZP_06981762.1| peptide chain release factor 2 [Neisseria sp. oral taxon 014 str. F0314] gi|298281906|gb|EFI23395.1| peptide chain release factor 2 [Neisseria sp. oral taxon 014 str. F0314] Length = 367 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 170/351 (48%), Positives = 241/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK + LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIDILEEDDGEIAGINRATIRLEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365 >gi|254804065|ref|YP_003082286.1| peptide chain release factor 2 [Neisseria meningitidis alpha14] gi|254667607|emb|CBA03375.1| peptide chain release factor 2 [Neisseria meningitidis alpha14] gi|254673936|emb|CBA09720.1| peptide chain release factor RF-2 [Neisseria meningitidis alpha275] gi|309379815|emb|CBX21591.1| unnamed protein product [Neisseria lactamica Y92-1009] gi|325143543|gb|EGC65864.1| peptide chain release factor 2 [Neisseria meningitidis M01-240013] gi|325207035|gb|ADZ02488.1| peptide chain release factor 2 [Neisseria meningitidis M04-240196] Length = 367 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 171/351 (48%), Positives = 241/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LEKRSEDIRVYMDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365 >gi|261401531|ref|ZP_05987656.1| peptide chain release factor 2 [Neisseria lactamica ATCC 23970] gi|269208367|gb|EEZ74822.1| peptide chain release factor 2 [Neisseria lactamica ATCC 23970] Length = 367 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 171/351 (48%), Positives = 241/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LEKRSEDIRVYMDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ASGIEDNRMLIEMTVEENDEEGFAAVKEDVVGLEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365 >gi|148560211|ref|YP_001258893.1| peptide chain release factor 2 [Brucella ovis ATCC 25840] gi|256369345|ref|YP_003106853.1| peptide chain release factor 2 [Brucella microti CCM 4915] gi|148371468|gb|ABQ61447.1| peptide chain release factor 2 [Brucella ovis ATCC 25840] gi|255999505|gb|ACU47904.1| peptide chain release factor 2 [Brucella microti CCM 4915] Length = 375 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 221/353 (62%), Positives = 286/353 (81%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + ++ L DWD AV+RL +LN + EDP LW + EA+ LMRERQ L+++I+ I Sbjct: 11 EIQQAISLLRRHLDWDQAVKRLGYLNQRAEDPTLWNDAQEAQKLMRERQQLEDSINGINH 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D++ L+ + EE D SI+++ ++ +K E++ +Q + LLSGEAD+ND YLEV Sbjct: 71 LKQTLNDSVELIAMGEEEGDKSIVEDAEKTIRDLKDEIDRRQIDMLLSGEADANDTYLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA+MLLRMYTRWAE+ K E +E+H+GEEAGIKSAT+L+KG N+YG L Sbjct: 131 HAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGIKSATILVKGHNSYGML 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+IE++++E+D RIDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTEADVRIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LYE EL+KREE + + Sbjct: 251 HVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLYEEELKKREEATDAANA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG + FM+A LA + Sbjct: 311 TKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTPFMEAALAHR 363 >gi|319638812|ref|ZP_07993570.1| peptide chain release factor 2 [Neisseria mucosa C102] gi|317399716|gb|EFV80379.1| peptide chain release factor 2 [Neisseria mucosa C102] Length = 367 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 173/351 (49%), Positives = 242/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+A+EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ASGIEDNRMLIEMAVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSFSS++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEDG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365 >gi|121635783|ref|YP_976028.1| peptide chain release factor 2 [Neisseria meningitidis FAM18] gi|261378556|ref|ZP_05983129.1| peptide chain release factor 2 [Neisseria cinerea ATCC 14685] gi|304388773|ref|ZP_07370830.1| peptide chain release factor RF2 [Neisseria meningitidis ATCC 13091] gi|166225113|sp|A1KWK6|RF2_NEIMF RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|120867489|emb|CAM11266.1| peptide chain release factor 2 [Neisseria meningitidis FAM18] gi|254671300|emb|CBA08663.1| peptide chain release factor RF-2 [Neisseria meningitidis alpha153] gi|261393453|emb|CAX51098.1| peptide chain release factor II (RF-2) [Neisseria meningitidis 8013] gi|269145108|gb|EEZ71526.1| peptide chain release factor 2 [Neisseria cinerea ATCC 14685] gi|304337265|gb|EFM03442.1| peptide chain release factor RF2 [Neisseria meningitidis ATCC 13091] gi|308390220|gb|ADO32540.1| peptide chain release factor 2 [Neisseria meningitidis alpha710] gi|325131224|gb|EGC53936.1| peptide chain release factor 2 [Neisseria meningitidis M6190] Length = 367 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 171/351 (48%), Positives = 241/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365 >gi|294668116|ref|ZP_06733223.1| peptide chain release factor 2 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309824|gb|EFE51067.1| peptide chain release factor 2 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 367 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 172/351 (49%), Positives = 241/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSFSS++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365 >gi|121595079|ref|YP_986975.1| peptide chain release factor 2 [Acidovorax sp. JS42] gi|222111422|ref|YP_002553686.1| hypothetical protein Dtpsy_2248 [Acidovorax ebreus TPSY] gi|229576664|sp|A1W9H4|RF2_ACISJ RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|254790913|sp|B9MBK7|RF2_DIAST RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|120607159|gb|ABM42899.1| bacterial peptide chain release factor 2 (bRF-2) [Acidovorax sp. JS42] gi|221730866|gb|ACM33686.1| conserved hypothetical protein [Acidovorax ebreus TPSY] Length = 367 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 171/351 (48%), Positives = 239/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + L D+D +RL +N EDP +W + +A+ L +E++ LD + ++++ Sbjct: 16 LTERTQELRRYLDYDAKFERLRTVNASLEDPAVWNDPKKAQELGKEKKSLDAVVLTLQKL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN L E++ EE D + L ++++ +E +F + S EAD + ++++ Sbjct: 76 TTELADNAELYEMSKEEGDEAGLTTIEAEAEKLRPLIEELEFRRMFSNEADPLNCFVDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y ++AE++ FK E G+ AGIKSAT+ I+G AYG L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLKYAERKGFKATVEEETPGDVAGIKSATIKIEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ RHTSF+S++VYP +DDSIEI I+ SD R DTYRASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASLFVYPEIDDSIEININPSDVRTDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVR+THIPTG+VVQCQ RSQH N+ AW LR++LY+ E++KR E E + Sbjct: 256 INKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKRMEEQQKLEDT 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 316 KTDVGWGHQIRSYVLD-NSRIKDLRTNVEVSATQKVLDGDLDVFIEASLKQ 365 >gi|255020528|ref|ZP_05292592.1| peptide chain release factor 2 [Acidithiobacillus caldus ATCC 51756] gi|254970048|gb|EET27546.1| peptide chain release factor 2 [Acidithiobacillus caldus ATCC 51756] Length = 349 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 184/344 (53%), Positives = 249/344 (72%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGG+FD RL + ++EDP LW++ A+ L RER L+ + ++E+ +L D+ Sbjct: 5 LGGIFDLPGKAARLEEVQLESEDPKLWEDPERAQALERERTQLEAVVRPLQELDQKLRDS 64 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 ++ELA+ E D ++L+ + +L+ + VE +F+ + SG D DA++++ AGAGGTE Sbjct: 65 AEMVELAVAEQDEALLEAVAGDLEAARATVEKLEFQRMFSGPQDGADAFVDIQAGAGGTE 124 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANMLLRMY W E R F TE +E+ +GE AGIKSA+L ++G +A+GWL+ E GVHR Sbjct: 125 AQDWANMLLRMYLHWCEARGFSTELVEVSEGEVAGIKSASLHVRGDHAFGWLRTETGVHR 184 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS +RRHTSF+S++VYP +DDS EIEI+ +D ++DTYRASGAGGQHVN TDSA Sbjct: 185 LVRKSPFDSGNRRHTSFASVFVYPEIDDSFEIEINPADLKVDTYRASGAGGQHVNKTDSA 244 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+THIPTG+VV CQ +RSQHKN+A+A MLR+KLYELE+QKR E +K++IGWG Sbjct: 245 VRLTHIPTGIVVACQTDRSQHKNRAEAMRMLRSKLYELEMQKRNAEKQALEDTKSDIGWG 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT +E VLDGDLD F++A L Sbjct: 305 HQIRSYVLD-QSRIKDLRTGVEVGDTQRVLDGDLDGFVEAALKA 347 >gi|325135363|gb|EGC57984.1| peptide chain release factor 2 [Neisseria meningitidis M0579] gi|325208983|gb|ADZ04435.1| peptide chain release factor 2 [Neisseria meningitidis NZ-05/33] Length = 367 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 171/351 (48%), Positives = 241/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LEKRSEDIRVYMDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ATGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365 >gi|149184652|ref|ZP_01862970.1| protein chain release factor B [Erythrobacter sp. SD-21] gi|148831972|gb|EDL50405.1| protein chain release factor B [Erythrobacter sp. SD-21] Length = 375 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 199/353 (56%), Positives = 262/353 (74%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ L + DW+ A++RL L+ + +DP LW + +A+ + +E++ L+ AI+ ++E Sbjct: 11 RIEAALALVRQSLDWERALRRLDELDARVQDPTLWDDPKQAQAITQEQKRLETAINTVRE 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ + D + +E+ E D ++ E +L + + + ++LLSGEAD ND+Y+E+ Sbjct: 71 IESEMGDAMEFVEMGEAEGDDDVVNEGLTSLSTLADRADRDKVQALLSGEADGNDSYIEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA ML RMY RWAE+R FK E +E G++AGIKSATLL+KG NAYG+ Sbjct: 131 HAGAGGTESQDWAEMLFRMYGRWAERRGFKVETVEYQAGDQAGIKSATLLLKGENAYGYA 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD I+IEI+ SD +IDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDDIDIEINPSDLKIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV Q +RSQHKNKA A NML+A+L+E E+ +RE A+ Sbjct: 251 HVNTTDSAVRITHQPTGIVVASQNDRSQHKNKATAMNMLKARLFEREMAEREAAASGEYQ 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K++IGWG QIRSYVLQPYQMVKDLRT + +P DVLDG LD F+ A LA + Sbjct: 311 EKSDIGWGHQIRSYVLQPYQMVKDLRTGVTSPTPDDVLDGALDPFISAALAQR 363 >gi|15677951|ref|NP_275123.1| peptide chain release factor 2 [Neisseria meningitidis MC58] gi|24638159|sp|Q9JXB3|RF2_NEIMB RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|7227395|gb|AAF42446.1| peptide chain release factor 2 [Neisseria meningitidis MC58] gi|316984027|gb|EFV63006.1| peptide chain release factor 2 [Neisseria meningitidis H44/76] gi|325139451|gb|EGC61991.1| peptide chain release factor 2 [Neisseria meningitidis CU385] Length = 367 Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 170/351 (48%), Positives = 241/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ F+ E LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFRIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365 >gi|261365043|ref|ZP_05977926.1| peptide chain release factor 2 [Neisseria mucosa ATCC 25996] gi|296313763|ref|ZP_06863704.1| peptide chain release factor 2 [Neisseria polysaccharea ATCC 43768] gi|288566638|gb|EFC88198.1| peptide chain release factor 2 [Neisseria mucosa ATCC 25996] gi|296839690|gb|EFH23628.1| peptide chain release factor 2 [Neisseria polysaccharea ATCC 43768] Length = 367 Score = 277 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 172/351 (49%), Positives = 241/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSFSS++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365 >gi|70728519|ref|YP_258268.1| peptide chain release factor 2, programmed frameshift [Pseudomonas fluorescens Pf-5] gi|68342818|gb|AAY90424.1| peptide chain release factor 2 (RF-2) [Pseudomonas fluorescens Pf-5] Length = 364 Score = 277 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 183/350 (52%), Positives = 243/350 (69%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + G D+D +RL+ +N + EDP +W A+ L RER L + + E+ Sbjct: 13 LSERSETIRGYLDYDQKHERLTEVNRELEDPSVWNKPEYAQELGRERAALAQIVETLDEL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LL++A+EE+D + + L R++ + +F + S E D N+AYL++ Sbjct: 73 NGGLADCRDLLDMAVEEEDEGAVGDVVAELARLEENLAKLEFRRMFSHEMDPNNAYLDIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWAN+LLRMY RWA+KR F +E+ GE AGIK AT+ IKG A+GWL+ Sbjct: 133 AGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ +D RIDTYR+SGAGGQH Sbjct: 193 TEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT VV CQ ERSQH NK A MLRAKLYE E+QKR + E + Sbjct: 253 VNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRAKLYEQEMQKRNAASQALEDT 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K++IGWG QIRSYVL +KDLRTNIE++ VLDGD+D++++A+L Sbjct: 313 KSDIGWGHQIRSYVLD-ASRIKDLRTNIERSDCDKVLDGDIDEYLEASLK 361 >gi|84684982|ref|ZP_01012882.1| peptide chain release factor 2 [Maritimibacter alkaliphilus HTCC2654] gi|84667317|gb|EAQ13787.1| peptide chain release factor 2 [Rhodobacterales bacterium HTCC2654] Length = 375 Score = 277 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 198/352 (56%), Positives = 246/352 (69%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L L W+ A RL LN TEDP LW + A+ LMRERQ L + K + Sbjct: 12 IEKSLALLRQRIGWETAEHRLEELNAMTEDPELWNDPDRAQKLMRERQSLVAQMDGYKAM 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D++ L+EL EDD ++++ L+ +K + E+LL+GEAD ND +LEVH Sbjct: 72 EQEKNDSVELIELGEMEDDDEVVKDAEAALKALKERAAAAEIEALLNGEADPNDTFLEVH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTES DWA+ML RMY RWAE +K E GEEAGIKSAT I G NAYGWLK Sbjct: 132 SGAGGTESCDWASMLARMYVRWAEAHGYKVELQSTTPGEEAGIKSATYKISGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IE+E++ +D RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEVEVAPNDIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV E+SQH+N+ A L+++LY++EL +R + N + Sbjct: 252 VNTTDSAVRITHIPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNQAINEAHEN 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K + GWG QIRSYVLQPYQMVKDLRT+ E + VLDGDLD M ATLA+ Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTSFETSDTQGVLDGDLDGLMAATLAMD 362 >gi|218767251|ref|YP_002341763.1| peptide chain release factor 2 [Neisseria meningitidis Z2491] gi|24638158|sp|Q9JWV4|RF2_NEIMA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|121051259|emb|CAM07534.1| peptide chain release factor 2 [Neisseria meningitidis Z2491] gi|319411456|emb|CBY91871.1| peptide chain release factor II (RF-2) [Neisseria meningitidis WUE 2594] Length = 367 Score = 277 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 171/351 (48%), Positives = 241/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ATGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365 >gi|225077011|ref|ZP_03720210.1| hypothetical protein NEIFLAOT_02063 [Neisseria flavescens NRL30031/H210] gi|261379582|ref|ZP_05984155.1| peptide chain release factor 2 [Neisseria subflava NJ9703] gi|224951568|gb|EEG32777.1| hypothetical protein NEIFLAOT_02063 [Neisseria flavescens NRL30031/H210] gi|284798056|gb|EFC53403.1| peptide chain release factor 2 [Neisseria subflava NJ9703] Length = 367 Score = 277 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 173/351 (49%), Positives = 242/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LEKRSEDIRVYMDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVVTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+A+EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ATGIEDNRMLIEMAVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSFSS++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365 >gi|218666919|ref|YP_002424975.1| peptide chain release factor 2, programmed frameshift [Acidithiobacillus ferrooxidans ATCC 23270] gi|226739123|sp|B7J4M2|RF2_ACIF2 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|218519132|gb|ACK79718.1| peptide chain release factor 2, programmed frameshift [Acidithiobacillus ferrooxidans ATCC 23270] Length = 365 Score = 277 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 174/351 (49%), Positives = 239/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ L G D + RL + + EDP +W N +A+ L RER L+ I+ + ++ Sbjct: 14 LQVRVAGLRGYLDLEEKRGRLEEVQRELEDPTIWNNAEKAQELGRERSALEAVITPMDKL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D +LELAL E D +L +L VE +F+ + SG D+ + ++++ Sbjct: 74 TASLADGGEMLELALSEQDAELLAAVDADLDTALSLVEKLEFQRMFSGAQDAANCFVDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA M+LRMY WAE F E +E+ +GE AGIKSA++ ++G +A+GWL+ Sbjct: 134 AGAGGTEAQDWAEMILRMYLHWAESHGFAAELVEVSEGEVAGIKSASIHVRGDHAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSF+S++VYP +DDS E++I+ +D ++DTYRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGNRRHTSFASVFVYPEIDDSFEVDINPADLKVDTYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSA+RITH+P+G+VV CQ +RSQHKN+A+A MLR+KLYE+E+QKR E S Sbjct: 254 VNKTDSAIRITHVPSGIVVACQTDRSQHKNRAEAMRMLRSKLYEMEMQKRAVEKQALEDS 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E VLDG LD F++A L Sbjct: 314 KSDIGWGHQIRSYVLD-QSRIKDLRTGVEVGDTQKVLDGALDMFIEAALKA 363 >gi|212640382|ref|YP_002316902.1| protein chain release factor B [Anoxybacillus flavithermus WK1] gi|212561862|gb|ACJ34917.1| Protein chain release factor B [Anoxybacillus flavithermus WK1] Length = 329 Score = 277 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 165/325 (50%), Positives = 222/325 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + A+ ++ E L + + + +++R + + EL EE D + +E Sbjct: 1 MAAPDFWDDQKAAQSVISEANALKDLVGEFRSLEERFENLEVTYELVKEEPDEELQKELV 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +++ + + + LL+ D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEK+ Sbjct: 61 AEAKKLSKDFSEFELQLLLNEPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K E L+ GEEAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S Sbjct: 121 YKVETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P DD+IEI++ + ++DTYR+SGAGGQHVNTTDSAVRITHIPTG+VV CQ ERSQ Sbjct: 181 EVVPEFDDNIEIDVRPDEIKVDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A NML+AKLY+ +L++++ + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNREKAMNMLKAKLYQKKLEEQQAELAEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG++D F+ A L K Sbjct: 301 TEVGNVQAVMDGEIDVFIDAYLRSK 325 >gi|119505213|ref|ZP_01627288.1| tRNA pseudouridine synthase D, TruD [marine gamma proteobacterium HTCC2080] gi|119458904|gb|EAW40004.1| tRNA pseudouridine synthase D, TruD [marine gamma proteobacterium HTCC2080] Length = 347 Score = 277 bits (707), Expect = 3e-72, Method: Composition-based stats. Identities = 174/342 (50%), Positives = 228/342 (66%), Gaps = 1/342 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+ RL+ + + +P +W A+ L +ER L+ + I ++ D+ Sbjct: 4 GGIFDYAEKKDRLAEVELELAEPSVWDEPERAQALGKERASLELVVKTIDDLDRGSTDSH 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LLE+A+ EDD + + + ++E +F + SGE D N+AYL+V +G+GGTE+ Sbjct: 64 DLLEMAVAEDDIDTADMVASDTSDLIAQLEKLEFRRMFSGEMDPNNAYLDVQSGSGGTEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDW MLLRMY RW E + FK +E GE AG+KSAT+ +G A+GWL+ E GVHRL Sbjct: 124 QDWTEMLLRMYLRWGESKGFKARVVEASAGEVAGLKSATVQFEGEYAFGWLRTETGVHRL 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS RRHTSF+SI+V P +DD+IEI+I+ +D R+DTYR+SGAGGQHVNTTDSAV Sbjct: 184 VRKSPFDSGGRRHTSFASIFVSPEIDDNIEIDINPADLRVDTYRSSGAGGQHVNTTDSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PT VV CQ ERSQH+NK A LRAKLYELE+ KR E SK +IGWG Sbjct: 244 RITHEPTNTVVSCQTERSQHQNKDNAMKQLRAKLYELEVLKRSADKQALEDSKADIGWGS 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 304 QIRSYVLDD-ARIKDLRTQVETRNTQAVLDGDLDKFIEASLK 344 >gi|332798808|ref|YP_004460307.1| peptide chain release factor 2 [Tepidanaerobacter sp. Re1] gi|332696543|gb|AEE91000.1| peptide chain release factor 2 [Tepidanaerobacter sp. Re1] Length = 365 Score = 277 bits (707), Expect = 3e-72, Method: Composition-based stats. Identities = 161/346 (46%), Positives = 227/346 (65%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L L + D ++ L KT W + A+ ++ L ++ + Sbjct: 16 LTELRDSLEIDKIKFEINQLEQKTFAADFWNDQELAQKTLQRLNDLKEKFDNFTLLEKKY 75 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D L L+EL E DD + E + ++ K ++E + ++LLSG+ D +A L +HAGAG Sbjct: 76 DDLLTLIELCTETDDEELRTELLNEMKDFKKQLEKMKLQTLLSGKYDGRNAILTLHAGAG 135 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW +MLLRMYTRWAE + +K L++ G+EAGIKSA +L++GPNAYG+LK E+G Sbjct: 136 GTEAQDWVSMLLRMYTRWAEDKGYKVSILDMLPGDEAGIKSAAVLVEGPNAYGYLKSEKG 195 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+D+ RRHTSF+S+ V P +DD IEI+I D +IDT+R+ GAGGQHVN T Sbjct: 196 VHRLVRISPFDAAGRRHTSFASVDVMPEIDDDIEIDIKPEDLKIDTFRSGGAGGQHVNKT 255 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITHIPTG VV CQ ERSQ N+ A +LRAKL+++ +++++ + S+ EI Sbjct: 256 ESAVRITHIPTGTVVSCQNERSQQSNRNTAMKILRAKLFDIYQEEQQKELDKIRGSQKEI 315 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSY+ PY +VKD RT++E + V+DG+LD+F+ A L Sbjct: 316 AWGSQIRSYIFHPYSLVKDHRTDVEVGNVQAVMDGELDEFINAYLK 361 >gi|254467077|ref|ZP_05080488.1| peptide chain release factor 2 [Rhodobacterales bacterium Y4I] gi|206687985|gb|EDZ48467.1| peptide chain release factor 2 [Rhodobacterales bacterium Y4I] Length = 375 Score = 277 bits (707), Expect = 3e-72, Method: Composition-based stats. Identities = 199/352 (56%), Positives = 254/352 (72%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L L +W+ A RL N + EDP+LW + A+ LMRERQ L ++I+ K Sbjct: 11 EIEKSLELLAQRMNWETAEYRLEEFNARVEDPNLWDDPEAAQKLMRERQALVDSINTYKG 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L DN+ L+EL E+D ++++ ++L+ +K K+ E+LL GEAD+ND +LE+ Sbjct: 71 IKQDLSDNIELIELGEMEEDAEVVKDAEESLKALKERAAEKELEALLDGEADANDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWA+ML RMY RWAEK+ +K E G+EAGIKSA I G NAYGWL Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGDEAGIKSAAYKISGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS ++RHTSFSS+WVYPVVDD+IEIE++ SD R+DTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPYDSAAKRHTSFSSVWVYPVVDDNIEIEVNPSDIRVDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG+VV E+SQH+N+ A L+++LY+ EL +R N Sbjct: 251 HVNTTDSAVRITHIPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQQELDRRHAEINAAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K + GWG QIRSYVLQPYQMVKDLRT E + VLDGDLD FM ATLA+ Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTQYETSDTKGVLDGDLDGFMAATLAM 361 >gi|296127692|ref|YP_003634944.1| hypothetical protein Bmur_2678 [Brachyspira murdochii DSM 12563] gi|296019508|gb|ADG72745.1| hypothetical protein Bmur_2678 [Brachyspira murdochii DSM 12563] Length = 367 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 165/352 (46%), Positives = 232/352 (65%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + Q L G D D+ +R+ ++ + W + I+A+ LM+ER L + I ++ + Sbjct: 13 IKEQSEILRGYLDPDSIYKRVKEIDEISAKDDFWNDNIKAQKLMKERMLLLDKIEPVENL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L+E+A+E +D + +E ++ + + ++L SGE DS +AYL ++ Sbjct: 73 IKNSNNIYELVEMAIESNDIEMEKELEGECIELQRVFDELETKNLFSGEFDSKNAYLTLN 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMY R+ E+ F E + G+EAGIK + ++G AYG+L+ Sbjct: 133 AGAGGTESCDWASMLSRMYVRFCERHGFTVEITDELPGDEAGIKQISFYVQGLYAYGYLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF ++ V P +D+ IE+EI+ SD R+DTYRASGAGGQH Sbjct: 193 SEIGVHRLVRISPFDANAKRHTSFVAVSVMPDIDEDIEVEINPSDLRVDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T SA+RITHIPT +VVQCQ ERSQH NK A ML+AKLY+LE K ++ Sbjct: 253 VNKTSSAIRITHIPTNIVVQCQAERSQHNNKDMAMKMLKAKLYQLEKDKLDKEKQKIAGE 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT+I WG QIRSYV QPYQMVKDLRT E + + V+DG++D+F+ A L + Sbjct: 313 KTDIAWGNQIRSYVFQPYQMVKDLRTGHETGNMNSVMDGNIDEFISAYLKQQ 364 >gi|285018127|ref|YP_003375838.1| peptide chain release factor 2 protein [Xanthomonas albilineans GPE PC73] gi|283473345|emb|CBA15850.1| probable peptide chain release factor 2 protein [Xanthomonas albilineans] Length = 373 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 179/343 (52%), Positives = 246/343 (71%), Gaps = 1/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG FD+D +RL + + E P +W + A+ L RER +L+ + I + + L ++ Sbjct: 20 YGGFFDYDAKKERLEEVARELESPDVWNDPERAQGLGRERANLEKTVGGIASVLEGLNES 79 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L LLELA E+D Q ++ R + +VE +F+ + SG+ DS +A++++ AGAGGTE Sbjct: 80 LELLELAESENDEDTAQGVIADVDRFQTQVEKLEFQRMFSGQMDSCNAFVDIQAGAGGTE 139 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA +LLRMY RW E R +KTE +E+ GE AGIKSATL ++G AYGWLK E GVHR Sbjct: 140 AQDWAEILLRMYLRWCESRGWKTELMEVSGGEVAGIKSATLRVEGDFAYGWLKTETGVHR 199 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+DS++RRHTSF+S++V P VDD+I+I+I+ +D + D YR+SGAGGQHVN T+SA Sbjct: 200 LVRKSPFDSDNRRHTSFTSVFVSPEVDDNIDIDINPADLKTDVYRSSGAGGQHVNKTESA 259 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV CQ RSQH+N+ A ML AKLYELE+QKR + E++K++IGWG Sbjct: 260 VRITHVPTGIVVACQTGRSQHQNRDNAMKMLAAKLYELEIQKRNAERDAVEATKSDIGWG 319 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIR+YVL +KDLRT IE++ VLDGDLD+F++A+L Sbjct: 320 SQIRNYVLD-QSRIKDLRTGIERSDTQKVLDGDLDEFVEASLK 361 >gi|254477534|ref|ZP_05090920.1| peptide chain release factor 2 [Ruegeria sp. R11] gi|214031777|gb|EEB72612.1| peptide chain release factor 2 [Ruegeria sp. R11] Length = 374 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 201/351 (57%), Positives = 252/351 (71%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L L DW+ A RL N + EDP+LW + A+ LMRERQ L +AI K I Sbjct: 12 IEKSLELLAQRLDWETAEFRLEEFNARVEDPNLWDDADAAQALMRERQMLVDAIDTYKSI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L DN+ L+EL EDD ++++ + L +K + K+ E+LL GEADSND +LE++ Sbjct: 72 KQELADNIELIELGEMEDDNEVVKDAEEALVALKEKAAEKELEALLDGEADSNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMY RWAEK+ +K E G+EAGIKSA I G NAYGWLK Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGDEAGIKSAAYKISGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS ++RHTSFSS+WVYPVVDD+IEI+++ +D R+DTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDSAAKRHTSFSSVWVYPVVDDNIEIDVNPADIRVDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV E+SQH+N+ A L+++LY+ EL +R N + Sbjct: 252 VNTTDSAVRITHIPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQQELDRRNADINAAHEA 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K + GWG QIRSYVLQPYQMVKDLRT+ E + VLDGDLD FM ATLA+ Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTKGVLDGDLDGFMAATLAL 361 >gi|311693658|gb|ADP96531.1| peptide chain release factor 2 [marine bacterium HP15] Length = 351 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 183/349 (52%), Positives = 244/349 (69%), Gaps = 1/349 (0%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 L GG+FD+D +RL + + E P +W + A+ L +ER L+ + I + Sbjct: 2 SALKRSGGIFDYDQRSERLIEVERELEQPSVWDDPERAQALGKERADLELIVKTIDNLTS 61 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 L D LL++A EE+D + E +L+ + E+E +F + SGE D+N+AYL++ AG Sbjct: 62 GLEDAEGLLDIAAEEEDEGTVAEIESDLEGLDKELEKLEFRRMFSGEMDANNAYLDIQAG 121 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 +GGTE+QDWANMLLRMY RWAE+R FK E +E+ +GE AGIKSAT+ I+G AYGWL+ E Sbjct: 122 SGGTEAQDWANMLLRMYLRWAERRGFKAEIVELMEGEVAGIKSATIHIQGDYAYGWLRTE 181 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHRLVR SP+DS +RRHTSFSS++V P VDDS EIEI+ +D R+D YRASGAGGQHVN Sbjct: 182 TGVHRLVRKSPFDSGNRRHTSFSSVFVSPEVDDSFEIEINPADLRVDVYRASGAGGQHVN 241 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T+SAVR+TH PTG+VV CQ RSQH+NK QA L+AKL+E E+Q+R E +K Sbjct: 242 RTESAVRLTHNPTGIVVACQAGRSQHQNKDQAMKQLKAKLFEREMQERNAEKQKAEDAKA 301 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +IGWG QIRSYVL +KDLRT +E ++ VLDGD+D F++A+L + Sbjct: 302 DIGWGSQIRSYVLDD-SRIKDLRTKVETSNTQSVLDGDIDKFIEASLKM 349 >gi|161871001|ref|YP_001600181.1| peptide chain release factor 2 [Neisseria meningitidis 053442] gi|161596554|gb|ABX74214.1| peptide chain release factor 2 [Neisseria meningitidis 053442] Length = 352 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 170/351 (48%), Positives = 241/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + ++ + D+ RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 1 MEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 60 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 61 ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 120 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ Sbjct: 121 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 180 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 181 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 240 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 241 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 300 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 301 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 350 >gi|332307386|ref|YP_004435237.1| hypothetical protein Glaag_3035 [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174715|gb|AEE23969.1| hypothetical protein Glaag_3035 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 365 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 183/350 (52%), Positives = 239/350 (68%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + ++ L G D+D +RL +N + E P +W A+ L +E+ L+ + I + Sbjct: 14 VKQRSTSLRGYLDYDQKSERLEEVNRELESPDVWNEPERAQALGKEKVALEQVVETIVFL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D LLELA+EE D E +L + ++E +F + SG D+ND Y+++ Sbjct: 74 EQGCVDVEELLELAVEESDQDTFDEAEKDLAELVAKLETLEFRRMFSGPNDANDGYIDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +G+GGTE+QDWA+MLLRMY RW E FKTE +E+ DG+ AGIKSAT+ +G A+GWL+ Sbjct: 134 SGSGGTEAQDWASMLLRMYLRWGEAHGFKTELIEVSDGDVAGIKSATIRFEGEYAFGWLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS SRRHTSF+S++ YP +DD IEI+I SD RIDTYRASGAGGQH Sbjct: 194 TETGVHRLVRKSPFDSGSRRHTSFASVFAYPEIDDDIEIDIDPSDLRIDTYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSAVRITH PT +VVQCQ +RSQHKNKAQA L+AKLYE E+QK+ E E S Sbjct: 254 VNRTDSAVRITHEPTNIVVQCQNDRSQHKNKAQAMKQLKAKLYEFEMQKQNEEKQNMEDS 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIQASLK 362 >gi|260575218|ref|ZP_05843218.1| peptide chain release factor 2 [Rhodobacter sp. SW2] gi|259022478|gb|EEW25774.1| peptide chain release factor 2 [Rhodobacter sp. SW2] Length = 375 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 207/352 (58%), Positives = 245/352 (69%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + R L LG D + A RL +N ED LW + A+ LMRERQ L +AIS K I Sbjct: 12 IGRSLALLGQRMDVETAPHRLEEMNAMIEDGDLWSDPARAQKLMRERQALLDAISTHKLI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L DN+ L+E+ E D I+ E L+ + K+ E+LL GEAD ND +LEV+ Sbjct: 72 ETGLRDNVELIEMGEAEGDAEIVSEAEQALRDLVELARGKELEALLDGEADGNDTFLEVN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMY RWAEK+ +K E + DGEEAGIKSA I GPNAYGWLK Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKKGYKVELQSMSDGEEAGIKSAAYKISGPNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEI+I D RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIDIPAGDIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT +VV +SQH+N+ LRA+LY+LEL KR N + Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREACMVALRARLYQLELDKRNAAVNAQHEA 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K + GWG QIRSYVLQPYQMVKDLRT +E + VLDGDLD FM ATLA+ Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMAATLAMD 362 >gi|255066677|ref|ZP_05318532.1| peptide chain release factor 2 [Neisseria sicca ATCC 29256] gi|255049005|gb|EET44469.1| peptide chain release factor 2 [Neisseria sicca ATCC 29256] Length = 367 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 171/351 (48%), Positives = 241/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAELEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365 >gi|241760713|ref|ZP_04758805.1| peptide chain release factor 2 [Neisseria flavescens SK114] gi|241318894|gb|EER55420.1| peptide chain release factor 2 [Neisseria flavescens SK114] Length = 367 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 173/351 (49%), Positives = 242/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LEKRSEDIRIYMDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVVTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+A+EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ATGIEDNRMLIEMAVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSFSS++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365 >gi|118580454|ref|YP_901704.1| peptide chain release factor 2 [Pelobacter propionicus DSM 2379] gi|118503164|gb|ABK99646.1| bacterial peptide chain release factor 2 (bRF-2) [Pelobacter propionicus DSM 2379] Length = 361 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 173/343 (50%), Positives = 237/343 (69%), Gaps = 1/343 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GGLFD D + + + +K P W N ++ +++ER L+ + + + D Sbjct: 9 GGLFDVDGKRESIQEIESKIAAPGFWDNADSSQGILKERTSLEKIVQLWDSLVRQQEDVR 68 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +++EL EE D L+E + R++ VE +F+ +LSGE D N ++ ++ GAGGTES Sbjct: 69 VMIELGEEEADEETLKEVGEMNNRLQQGVEAAEFQRMLSGEHDRNSCFISINPGAGGTES 128 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMY R+ EK+ +KT + G+EAGIKSAT + G AYG+LK E G+HRL Sbjct: 129 QDWAEMLLRMYLRYCEKKGWKTSITDYQSGDEAGIKSATFSVSGEYAYGYLKAEAGIHRL 188 Query: 191 VRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 VRISP+DSN+RRHTSF+S++ +P + ++ I+I+I++SD R+DT+R+ GAGGQHVNTTDSA Sbjct: 189 VRISPFDSNARRHTSFASVYAFPEIEEEDIDIKIADSDLRVDTFRSGGAGGQHVNTTDSA 248 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PT +VV CQ ERSQ N+A A +LRAKLYE E+Q+R A+ S K EIGWG Sbjct: 249 VRITHLPTNIVVACQSERSQILNRATAMKVLRAKLYEKEVQERTARASEIASEKKEIGWG 308 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL PY+MVKDLRT +E +P VLDG L++F+ A L Sbjct: 309 SQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGALEEFVVAYLM 351 >gi|257066737|ref|YP_003152993.1| peptide chain release factor 2 [Anaerococcus prevotii DSM 20548] gi|256798617|gb|ACV29272.1| bacterial peptide chain release factor 2 (bRF- 2) [Anaerococcus prevotii DSM 20548] Length = 367 Score = 276 bits (706), Expect = 3e-72, Method: Composition-based stats. Identities = 156/354 (44%), Positives = 227/354 (64%), Gaps = 2/354 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS++L +G D + + + L ++ P W + +A+ +M + + +S K++ Sbjct: 14 LSQKLKLIGDSLDPASLEKEIKELEKQSASPDFWNDSDKAQKIMADLASKKDELSDYKKL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEADSNDAYLE 120 ++ L DN +L+L ++ + + + + L GE D N+AY+ Sbjct: 74 ENGLVDNTDMLDLVEMSEEKETDTIEEVEDSLKNLAKLATQMKLRTQLDGEYDKNNAYIS 133 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 ++AGAGG E+ DWA+ML RMY R+ + FK E ++++ E GIKSAT+ + GP AYG+ Sbjct: 134 INAGAGGLEATDWADMLFRMYKRYFDSIGFKYEIKDLNNEEAGGIKSATMHVTGPYAYGY 193 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E+GVHRLVRISP+DS SRRHTSF+S+ V+P +D++IE++I SD RIDTYRASGAGG Sbjct: 194 LKAEKGVHRLVRISPFDSQSRRHTSFASVDVFPELDENIELDIDPSDLRIDTYRASGAGG 253 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVN TDSAVRITHIPTGVV Q ERSQ +N+ A N+L++KL +++ +++ E + Sbjct: 254 QHVNKTDSAVRITHIPTGVVATSQAERSQIQNRQTAMNLLKSKLVQIKEEEQREKIEDIQ 313 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 S ++I WG QIRSYV QPY +VKD RT E + V+DGD+ F+ A LA K Sbjct: 314 GSYSQIAWGSQIRSYVFQPYTLVKDHRTGFEMGNVEAVMDGDIQGFIDAFLADK 367 >gi|163731562|ref|ZP_02139009.1| peptide chain release factor 2 [Roseobacter litoralis Och 149] gi|161395016|gb|EDQ19338.1| peptide chain release factor 2 [Roseobacter litoralis Och 149] Length = 374 Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 200/353 (56%), Positives = 254/353 (71%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + L+ L D + A RL N + EDP LW + A+ LMR+RQ L +A++ Sbjct: 11 KIQKSLDLLAQRLDVETAPYRLEEFNARVEDPTLWDDPDAAQKLMRDRQMLVDAMATHDN 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ + DN+ L+EL EDD ++ + + L+ ++ K+ E+LL GEADSND +LEV Sbjct: 71 IKQEMADNIELIELGEMEDDADVITDAENALRALEETAAKKELEALLDGEADSNDTFLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTES DWANML RMY RWAEK+ +K E + DG+EAGIKSAT I G NAYGWL Sbjct: 131 NAGAGGTESCDWANMLARMYVRWAEKKGYKVELQSMSDGDEAGIKSATYKITGLNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+I+I+++ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIDIDVNPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL +R N Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +K + GWG QIRSYVLQPYQMVKDLRTN E + VLDGDLD FM ATLA+ Sbjct: 310 NKGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGFMAATLALD 362 >gi|163747048|ref|ZP_02154404.1| peptide chain release factor 2 [Oceanibulbus indolifex HEL-45] gi|161379609|gb|EDQ04022.1| peptide chain release factor 2 [Oceanibulbus indolifex HEL-45] Length = 374 Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 200/352 (56%), Positives = 251/352 (71%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++S+ L L D D A RL N + EDP+LW N A+ LMRERQ L +AI + Sbjct: 11 QISKSLELLAQRLDVDTAPYRLEEFNARVEDPNLWDNPDAAQKLMRERQSLVDAIDTYEG 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L DN+ L+EL E D +++E L+ + K+ E+LL+GEADSND +LE+ Sbjct: 71 IKQELADNVELIELGEMEGDEEVIKEAEVALKSLAATAAQKELEALLNGEADSNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTES DWA+ML RMY RWAEK+ +K + GEEAGIKSAT I+G NAYGWL Sbjct: 131 NSGAGGTESCDWASMLARMYVRWAEKKGYKVDLQAESAGEEAGIKSATYKIEGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL KR + N Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDKRSALVNEAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + + GWG QIRSYVLQPYQMVKDLRTN E + VLDGDLD M ATLA+ Sbjct: 310 NAGDAGWGNQIRSYVLQPYQMVKDLRTNYETSDTKGVLDGDLDGLMGATLAL 361 >gi|313669297|ref|YP_004049581.1| peptide chain release factor 2 [Neisseria lactamica ST-640] gi|313006759|emb|CBN88229.1| peptide chain release factor 2 [Neisseria lactamica 020-06] Length = 367 Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 171/351 (48%), Positives = 241/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LEKRSEDIRVYMDYQGKKDRLEEVVGLSEDPELWNDQKRAQEIGKERKILEGIVLTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365 >gi|189425791|ref|YP_001952968.1| hypothetical protein Glov_2735 [Geobacter lovleyi SZ] gi|189422050|gb|ACD96448.1| hypothetical protein Glov_2735 [Geobacter lovleyi SZ] Length = 372 Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 170/351 (48%), Positives = 236/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ +++ L D D+ + L L+ + P W + ++ ++++R ++ + + Sbjct: 12 LTSRISSLRRSLDLDSKREELQELDARIAAPGFWDDPSGSQDILKKRTVIEKLLQSWDSL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D +++EL E D L E +R+K VE +F+ +LSG D N ++ V+ Sbjct: 72 NRQADDVRVMIELGEESSDEDTLTEVHQMNERLKSGVEEAEFQRMLSGTHDRNGCFVSVN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDWANMLLRM R+ EK+ +K + DGEEAG+KSAT + G AYG LK Sbjct: 132 SGAGGTESQDWANMLLRMLLRYCEKKGWKAVITDYQDGEEAGLKSATFSVSGEFAYGHLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVR+SP+DSN+RRHTSF+S++V+P + ++ I+I I++SD R+DTYR+SG+GGQ Sbjct: 192 AEAGVHRLVRLSPFDSNNRRHTSFASVFVFPEIEEEDIDIRIADSDLRVDTYRSSGSGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PT +VV CQ ERSQ N+A A +LRAKLYE E+++R A+ Sbjct: 252 HVNTTDSAVRITHLPTNIVVACQSERSQILNRATAMKVLRAKLYEKEMEERNAKASEIAG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K EIGWG QIRSYVL PY+MVKDLRT +E +P VLDG LDDF+ L Sbjct: 312 EKREIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDSVLDGALDDFVIPFLM 362 >gi|146277893|ref|YP_001168052.1| peptide chain release factor 2 [Rhodobacter sphaeroides ATCC 17025] gi|145556134|gb|ABP70747.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodobacter sphaeroides ATCC 17025] Length = 375 Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 201/352 (57%), Positives = 244/352 (69%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + R L LG D + A RL + ED +LW + A+ LMRERQ L + +S + I Sbjct: 12 IKRSLELLGQRMDLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQLSTYRLI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN+ L+EL E D I+ E ++ + K+ E+LL GEAD ND +LE++ Sbjct: 72 DTGLRDNVELIELGEAEGDTEIVTEAEAAIRTLVETARAKELEALLDGEADGNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMY RWAE++ +K E GEEAGIKSA I GPNAYGWLK Sbjct: 132 AGAGGTESCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIEI ++ RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEIPANEIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT +VV +SQH+N+ A N L+A+LY++EL KR N + Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREAAMNALKARLYQMELDKRNAAINAQHEA 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K E GWG QIRSYVLQPYQMVKDLRT +E + VLDGDLD FM+ATLA Sbjct: 311 KGEAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMQATLAQD 362 >gi|138896684|ref|YP_001127137.1| peptide chain release factor 2, RF-2 [Geobacillus thermodenitrificans NG80-2] gi|134268197|gb|ABO68392.1| Bacterial peptide chain release factor 2, RF-2 [Geobacillus thermodenitrificans NG80-2] Length = 327 Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 167/325 (51%), Positives = 222/325 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + A+ ++ E L + + + +R + + EL EE D + E Sbjct: 1 MAAPGFWDDQKAAQAIISEANALKELVGEFESLAERFDNLEVTYELLKEEPDDELQAELV 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +++ + + + LL+ D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEK+ Sbjct: 61 EEAKKLTKDFSQFELQLLLNEPYDQNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ GEEAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S Sbjct: 121 FKVETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEIEI + +IDTYR+SGAGGQHVNTTDSAVRITH+PTG+VV CQ ERSQ Sbjct: 181 EVVPEMDDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A NML+AKLY+ ++++++ + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNREKAMNMLKAKLYQKKMEEQQAELAELRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DG++D F+ A L K Sbjct: 301 VEVGNVQAVMDGEIDVFIDAYLRAK 325 >gi|117924338|ref|YP_864955.1| peptide chain release factor 2 [Magnetococcus sp. MC-1] gi|117608094|gb|ABK43549.1| bacterial peptide chain release factor 2 (bRF-2) [Magnetococcus sp. MC-1] Length = 379 Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 182/352 (51%), Positives = 249/352 (70%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + +L L G +++ +RLS L + +DP+LW + A+ +M E+ L+ I + Sbjct: 20 IGEKLTLLRGHLNYEQGKERLSELESLAQDPNLWGDSERARTVMTEKNRLEKTIGEWDAL 79 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 D LLE+A EE D ++ E + + I +E + +LSGEAD+N+ ++E+H Sbjct: 80 NSESTDARDLLEMAQEEGDSGMIAEVTAQVAAILKRLEGLELARMLSGEADANNCFIEIH 139 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++LLRMY R+ EK FKTE ++ G+EAGIKS T+ ++G AYG+LK Sbjct: 140 PGAGGTESQDWASILLRMYLRYCEKSGFKTEEVDYLAGDEAGIKSVTIKVEGDYAYGYLK 199 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DS++RRHTSF+S+ VYP +DDSIEIEI + D R+DT+RASGAGGQH Sbjct: 200 VESGVHRLVRISPFDSSARRHTSFTSVNVYPEIDDSIEIEILDKDLRVDTFRASGAGGQH 259 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSA+RITH PTG+VVQCQ RSQH+N+ +A MLRA+L++LE+ KR E A + Sbjct: 260 VNKTDSAIRITHQPTGIVVQCQSGRSQHRNRDEAMKMLRARLFQLEMDKRAEAAQAVADA 319 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K++I WG QIRSYVL PY++VKDLRT+ E + VLDG+LD F+KA L+ + Sbjct: 320 KSDIAWGHQIRSYVLAPYRLVKDLRTSYETGNTDAVLDGELDGFIKAALSQR 371 >gi|85374178|ref|YP_458240.1| protein chain release factor B [Erythrobacter litoralis HTCC2594] gi|84787261|gb|ABC63443.1| protein chain release factor B [Erythrobacter litoralis HTCC2594] Length = 375 Score = 276 bits (705), Expect = 4e-72, Method: Composition-based stats. Identities = 206/353 (58%), Positives = 266/353 (75%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ L + DW+ A++RL LN + +DP LW + EA+ + RE++ L+ A+ ++E Sbjct: 11 RIEAALALVRQSLDWERALRRLDELNARVQDPDLWNDPKEAQAISREQKTLETAVKTVRE 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I + D + +EL E D +++E +LQ++ + + ++LLSGEAD ND Y+E+ Sbjct: 71 IGSEMADAIEFVELGEAEGDEDVVKEGLASLQKLADRADADKVQALLSGEADGNDTYIEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA MLLRMY RWAE+R FK E +E G++AGIKSATLL+KG NAYG+ Sbjct: 131 HAGAGGTESQDWAEMLLRMYARWAERRGFKVETVEYQAGDQAGIKSATLLVKGENAYGYA 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD+IEIEI++SD +IDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDNIEIEINDSDLKIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV Q +RSQHKN+A A NML+A+L+E E+ +RE A+ Sbjct: 251 HVNTTDSAVRITHQPTGIVVASQNDRSQHKNRATAMNMLKARLFEREMAEREAAASGEYQ 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KTEIGWG QIRSYVLQPYQMVKDLRT + +SP DVLDG LD ++ A LA + Sbjct: 311 EKTEIGWGHQIRSYVLQPYQMVKDLRTGVTSSSPDDVLDGALDPYISAALAQR 363 >gi|149914781|ref|ZP_01903311.1| LexA repressor [Roseobacter sp. AzwK-3b] gi|149811574|gb|EDM71409.1| LexA repressor [Roseobacter sp. AzwK-3b] Length = 375 Score = 276 bits (705), Expect = 5e-72, Method: Composition-based stats. Identities = 193/353 (54%), Positives = 248/353 (70%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ L L W+ A RL N + EDP LW + +A+ LMR+RQ L +AI+ Sbjct: 11 EIKTSLELLRQRMGWETARHRLEEFNARVEDPQLWDDPAKAQKLMRDRQGLVDAITTHDT 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 IQ + DN+ L+EL E D ++ E ++ + + K+ E+LL+GEAD+NDA+LE+ Sbjct: 71 IQQEMQDNVELIELGEMEGDPDVVAEAEAAIKALARKAAQKELEALLNGEADANDAFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTES DWA+ML RMY RWAE+ + E GEEAGIKS T + G NAYGWL Sbjct: 131 HAGAGGTESCDWASMLARMYVRWAEQHGYTVELQSETAGEEAGIKSVTYKVTGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+IEIE++ +D RIDT+R+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIEIEVNPADIRIDTFRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL +R E Sbjct: 251 HVNKTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNEAIAEAHD 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +K + GWG QIRSYVLQPYQMVKDLRT++E + VLDGDLD FM ATLA+ Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTSVETSDTKGVLDGDLDQFMAATLAMD 362 >gi|196249386|ref|ZP_03148084.1| peptide chain release factor 2 [Geobacillus sp. G11MC16] gi|196211143|gb|EDY05904.1| peptide chain release factor 2 [Geobacillus sp. G11MC16] Length = 327 Score = 276 bits (705), Expect = 5e-72, Method: Composition-based stats. Identities = 167/325 (51%), Positives = 222/325 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + A+ ++ E L + + + +R + + EL EE D + E Sbjct: 1 MAAPGFWDDQKAAQAIISEANALKELVGEFESLAERFDNLEVTYELLKEEPDDELQAELV 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +++ + + + LL+ D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEK+ Sbjct: 61 EEAKKLTKDFSQFELQLLLNEPYDQNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ GEEAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S Sbjct: 121 FKVETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEIEI + +IDTYR+SGAGGQHVNTTDSAVRITH+PTG+VV CQ ERSQ Sbjct: 181 EVVPEMDDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A NML+AKLY+ ++++++ + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNREKAINMLKAKLYQKKMEEQQAELAELRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DG++D F+ A L K Sbjct: 301 VEVGNVQAVMDGEIDVFIDAYLRAK 325 >gi|152980486|ref|YP_001352951.1| peptide chain release factor 2 [Janthinobacterium sp. Marseille] gi|166223628|sp|A6SXF4|RF2_JANMA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|151280563|gb|ABR88973.1| RF-2 peptide chain release factor [Janthinobacterium sp. Marseille] Length = 367 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 179/351 (50%), Positives = 244/351 (69%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + L D+D ++L +N + EDP +W + A+ L +E++ L+ + + +I Sbjct: 16 LTTRATELRRYLDFDVKSEKLDQVNGELEDPDVWNDQKRAQDLGKEKKSLEAIVHTLIKI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D L E+A EE D + ++ Q + VE +F + S D+N+ ++++ Sbjct: 76 DSELNDARDLFEMAREEKDEDTIVAIENDAQELLKLVEGMEFRRMFSNPMDANNCFIDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA+MLLR Y R+ E++ FK E LE DGE AGIK+ATL ++G AYG+L+ Sbjct: 136 AGAGGTEAQDWASMLLRQYLRYCERKGFKVEILEQSDGEVAGIKTATLKVEGDYAYGFLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS + RHTSFSS++VYP VDDSIEI+I+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSANGRHTSFSSLFVYPEVDDSIEIDINPADVRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVR+TH P+G+VVQCQ +RSQH+NKA+AW+ML+AKL+ELE++ R E S Sbjct: 256 INKTDSAVRLTHGPSGIVVQCQNDRSQHRNKAEAWDMLKAKLFELEMRNRMSEQQKLEDS 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KT++GWG QIRSYVL +KDLRTN E + VLDGDLDDF+ A+L Sbjct: 316 KTDVGWGHQIRSYVLD-QSRIKDLRTNFETGNTKAVLDGDLDDFIAASLKQ 365 >gi|169826759|ref|YP_001696917.1| peptide chain release factor 2 [Lysinibacillus sphaericus C3-41] gi|168991247|gb|ACA38787.1| Peptide chain release factor 2 (RF-2) [Lysinibacillus sphaericus C3-41] Length = 328 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 172/326 (52%), Positives = 224/326 (68%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +P W + A++++ E L ++ KE+++ + + LEL EE D + +E Sbjct: 1 MMLEPGFWDDQQGAQVIINEGNGLKAIVNEYKELEETHENLDMTLELLREEPDEELQEEL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 L + ++ + + LLSG D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR Sbjct: 61 GKELVEFQQKMADFELQLLLSGPYDQNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E ++ G+EAGIKS T+ IKG NA+G+L+ E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 GFKVETMDYLPGDEAGIKSVTISIKGHNAFGYLQAEKGVHRLVRISPFDSSGRRHTSFVS 180 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P D++IEI+I D +IDTYRA+GAGGQH+NTTDSAVRITHIPTG VVQCQ ERS Sbjct: 181 CDVMPEFDENIEIDIRTEDLKIDTYRATGAGGQHINTTDSAVRITHIPTGTVVQCQAERS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q KN+ +A ML+ KLY+LEL+K++ + + +IGWG QIRSYV PY MVKD RT Sbjct: 241 QIKNREKAMAMLKGKLYQLELEKQQAQLDEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354 N E + V+DGDLD F+ A L K Sbjct: 301 NEETGNVGAVMDGDLDPFINAYLRSK 326 >gi|319762196|ref|YP_004126133.1| peptide chain release factor 2 [Alicycliphilus denitrificans BC] gi|330825983|ref|YP_004389286.1| hypothetical protein Alide2_3440 [Alicycliphilus denitrificans K601] gi|317116757|gb|ADU99245.1| Peptide chain release factor 2 [Alicycliphilus denitrificans BC] gi|329311355|gb|AEB85770.1| hypothetical protein Alide2_3440 [Alicycliphilus denitrificans K601] Length = 367 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 174/351 (49%), Positives = 236/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + L D+D +RL +N EDP++W + +A+ L +E++ LD + ++++ Sbjct: 16 LANRTQELRRYLDYDAKYERLRTVNASLEDPNVWNDPKKAQELGKEKKLLDGVVLTLQKL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN L E++ EE D + L ++ +E +F + S EAD + Y+++ Sbjct: 76 TAELADNAELYEMSREEGDEAGLLAIEGEAAKLLPLIEELEFRRMFSKEADPLNCYIDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA MLLR Y ++AE++ FK E G+ AGIKSAT+ I+G AYG L+ Sbjct: 136 AGAGGTEACDWAGMLLRQYLKYAERKGFKATVDEETPGDVAGIKSATIHIEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS+ RHTSF+S++VYP VDDSIEI I+ +D R DTYRASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASLFVYPEVDDSIEININPADVRTDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVR+THIPTG+VVQCQ RSQH N+ AW LR+KLYE E+QKR E + Sbjct: 256 INKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSKLYEHEMQKRMVEQQKLEDT 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 316 KTDVGWGHQIRSYVLD-NSRIKDLRTNVEVSATQKVLDGDLDVFIEASLKQ 365 >gi|260223373|emb|CBA33874.1| Peptide chain release factor 2 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 342 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 167/341 (48%), Positives = 233/341 (68%), Gaps = 1/341 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 +FD+D +RL +N EDP +W + +A+ L +E++ LD + + ++ L DN L Sbjct: 1 MFDYDAKAERLRTVNASLEDPSVWNDPKKAQELGKEKKMLDGVVVTLNDLTSNLSDNTEL 60 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E++ EE D L ++ VE +F + + AD +L++ AGAGGTE+ D Sbjct: 61 YEMSKEEGDEESLLTIETETAKLTEIVEGLEFRRMFNNPADPLPCFLDIQAGAGGTEACD 120 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA+MLLR Y ++AE++ F ++ DG+ AGIKSAT+ I G A+G L+ E GVHRLVR Sbjct: 121 WASMLLRQYLKYAERKGFTANVEDLTDGDTAGIKSATIKIDGEYAFGHLRTETGVHRLVR 180 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 SP+DS+ RHTSF+S++VYP +DDSIEI+I+ +D R DT+RASGAGGQH+N TDSAVR+ Sbjct: 181 KSPFDSSGGRHTSFASVFVYPEIDDSIEIDINPADVRTDTFRASGAGGQHINKTDSAVRL 240 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 THIPTG+VVQCQ RSQH N+ AW LR++LY+ EL+KR+E E +KT++GWG QI Sbjct: 241 THIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDFELRKRQEEQQKLEDTKTDVGWGHQI 300 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 RSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 301 RSYVLD-NSRIKDLRTNVEVSATQKVLDGDLDVFIQASLKQ 340 >gi|160898706|ref|YP_001564288.1| peptide chain release factor 2 [Delftia acidovorans SPH-1] gi|160364290|gb|ABX35903.1| peptide chain release factor 2 [Delftia acidovorans SPH-1] Length = 386 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 172/346 (49%), Positives = 236/346 (68%), Gaps = 1/346 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD+D +RL +N EDP +W + +A+ L +E++ LD + ++++ L Sbjct: 40 QIYGGIFDYDAKYERLRTVNASLEDPSVWNDPKKAQELGKEKKLLDGVVLTLQKLTTELA 99 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 DN L E++ EE D + L +++ +E +F + EAD + ++++ AGAGG Sbjct: 100 DNAELFEMSKEEGDETGLLTIEGETAKLQPLIEELEFRRMFGKEADPLNCFVDIQAGAGG 159 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DWA MLLR Y ++AE++ FK E G+ AGIKSAT+ I+G AYG L+ E GV Sbjct: 160 TEACDWAGMLLRQYLKYAERKGFKATVEEETPGDIAGIKSATIHIEGEYAYGLLRTETGV 219 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS+ RHTSF+S++VYP +DDSI+IEI+ SD R DTYRASGAGGQH+N TD Sbjct: 220 HRLVRKSPFDSSGGRHTSFASLFVYPEIDDSIQIEINPSDVRTDTYRASGAGGQHINKTD 279 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+VVQCQ RSQH N+ AW LR+KLYE E+QKR E +KT++G Sbjct: 280 SAVRLTHMPTGIVVQCQDGRSQHSNRDVAWQRLRSKLYEHEMQKRMVEQQKLEDTKTDVG 339 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 340 WGHQIRSYVLD-NSRIKDLRTNVEISATQKVLDGDLDAFIEASLKQ 384 >gi|148556746|ref|YP_001264328.1| peptide chain release factor 2 [Sphingomonas wittichii RW1] gi|148501936|gb|ABQ70190.1| bacterial peptide chain release factor 2 (bRF-2) [Sphingomonas wittichii RW1] Length = 375 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 208/353 (58%), Positives = 267/353 (75%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++++ + + DWD A++RL LN + EDP LW + A+ +MRER+ LD A+S +K Sbjct: 11 QINQAMALVRRFLDWDRALRRLDELNNRVEDPKLWDDAKAAQEVMRERRRLDEAVSAVKA 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ D + L+ELA EDD +++ + L + E + +LL+GEAD+N+ Y+EV Sbjct: 71 IEQERDDTIELIELAEAEDDTALVDDGVQALAALAERAEKDKIGALLAGEADANNTYIEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTESQDWA ML RMY RWAE+ +K E ++ H GE+AGIKSATLL++G NAYG+ Sbjct: 131 NSGAGGTESQDWAGMLQRMYARWAERHGYKVELIDFHAGEQAGIKSATLLVRGENAYGYA 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS +RRHTSF+S+WVYP VDD I+IE+ E D +IDTYR+SGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSAARRHTSFASVWVYPEVDDDIDIEVLEKDLKIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PTG++V CQ +RSQHKN+A+A L+A+LYE ELQKRE A G + Sbjct: 251 HVNTTDSAVRITHVPTGIIVACQNQRSQHKNRAEAMKQLKARLYEQELQKREAEAMAGYA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +KTEIGWG QIRSYVLQPYQMVKDLRT T+PSDVLDGDLD FM A L+ + Sbjct: 311 AKTEIGWGHQIRSYVLQPYQMVKDLRTGTTSTAPSDVLDGDLDRFMAAALSQR 363 >gi|293375591|ref|ZP_06621865.1| peptide chain release factor 2 [Turicibacter sanguinis PC909] gi|325836763|ref|ZP_08166230.1| peptide chain release factor 2 [Turicibacter sp. HGF1] gi|292645808|gb|EFF63844.1| peptide chain release factor 2 [Turicibacter sanguinis PC909] gi|325491141|gb|EGC93430.1| peptide chain release factor 2 [Turicibacter sp. HGF1] Length = 365 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 161/352 (45%), Positives = 220/352 (62%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+S ++N + + + + + + W + +A+ ++ + + ++ Sbjct: 12 KMSERINQFKDSLNVEQKEAEIKEYDDQMQVAGFWDDQRKAQEVINAANAIKDKVNTFYS 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ + + + EL LEE D + E ++ + + + E LLSG D+N+A LE+ Sbjct: 72 LEGEVEELAVAFELILEEPDADLQAELESQIEEVSEHLNKFELEILLSGPYDANNAILEL 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA ML RMYTR+AE++ FK E L+ GEEAGIKS T+ IKG NA+G+ Sbjct: 132 HPGAGGTESQDWAEMLYRMYTRYAERKGFKIEVLDYLVGEEAGIKSVTIKIKGTNAFGYF 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS RRHTSF S V P I+IEI D +IDTYRASGAGGQ Sbjct: 192 KAERGVHRLVRISPFDSGGRRHTSFCSCDVMPEFSGDIDIEIRAEDLKIDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+NTTDSAVRITHIPT +V CQ +RSQ KN+ A ML++KLY+ +L+++E Sbjct: 252 HINTTDSAVRITHIPTNTIVTCQNQRSQIKNREAAMEMLKSKLYQRKLEEQEAELAKIRG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 EIGWG QIRSYV PY +VKD RT+ E + V+DGDLD F+ A L Sbjct: 312 EVKEIGWGSQIRSYVFHPYSLVKDHRTSYEVGNVQSVMDGDLDGFIDAYLRY 363 >gi|238897260|ref|YP_002922937.1| peptide chain release factor RF-2 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465015|gb|ACQ66789.1| peptide chain release factor RF-2 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 348 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 177/347 (51%), Positives = 241/347 (69%), Gaps = 1/347 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + GG+FD+D +RL +N + E P +W+ A+ L +ER L + + +++ L Sbjct: 1 MKLSGGIFDYDEKKERLEEINAELEQPDIWKQPEWAQKLGKERAILQEIVETLSQLEKEL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LL+LA+E D E L+ I ++ +F + SG+ D D YL++ +G+G Sbjct: 61 KDVSTLLDLAIEAQDRETFNEAVFELEAIDKKLNRLEFRRMFSGKNDFADCYLDLQSGSG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWANMLLRMY RWA+ + FKTE +EI DGE AGIKSATL I G +A+GWL+ E G Sbjct: 121 GTEAQDWANMLLRMYLRWADSKGFKTEIIEISDGEVAGIKSATLKITGDHAFGWLRTETG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR SP+DS +RRHTSF+S +VYP ++D+I+I+I+ +D RID YRASGAGGQH+N T Sbjct: 181 VHRLVRKSPFDSGARRHTSFASAFVYPELEDNIDIDINPADLRIDVYRASGAGGQHINKT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITH+PT +V QCQ +RSQHKNK QA+ L+AKLYE E+QK+ I E +K++I Sbjct: 241 ESAVRITHLPTNIVTQCQSDRSQHKNKEQAFKQLKAKLYEFEMQKKNADKKIMEDNKSDI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 GWG QIRSY+L +KDLRT +E + VLDG LD F++A+L Sbjct: 301 GWGSQIRSYILDD-SRIKDLRTGLETRNTQAVLDGYLDKFIEASLKA 346 >gi|222152785|ref|YP_002561962.1| peptide chain release factor 2 [Streptococcus uberis 0140J] gi|254790921|sp|B9DRN6|RF2_STRU0 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|222113598|emb|CAR41450.1| peptide chain release factor 2 [Streptococcus uberis 0140J] Length = 366 Score = 275 bits (704), Expect = 5e-72, Method: Composition-based stats. Identities = 155/354 (43%), Positives = 221/354 (62%), Gaps = 2/354 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 ++ +L D D + ++ L K +P W + I A+ +E L + Sbjct: 11 VENKEKLTSFRRSLDLDGLEEEIALLENKMTEPDFWNDNIAAQKTSQELNTLKSTFETFH 70 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 ++ + + L L + +D SI +E + L +++ + + LLS D N+A LE Sbjct: 71 DMLELSDETE--LYLEMLAEDESIKEELEEALVKLEQILSQYEMTLLLSEPYDHNNAILE 128 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +H G+GGTE+QDWA+ML RMYTR+ + FK E L+ G+EAGIKS TL +GPNAYG+ Sbjct: 129 IHPGSGGTEAQDWADMLFRMYTRFGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGF 188 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E GVHRLVRISP+DS RRHTSF+S+ V P +DD+IE++I + D ++DT+R+ GAGG Sbjct: 189 LKSEMGVHRLVRISPFDSAKRRHTSFTSVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGG 248 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q+VN + VR+THIPTG+VV +R+Q+ N+ +A ML+AKLY+LE +K+ E N + Sbjct: 249 QNVNKVSTGVRLTHIPTGIVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALK 308 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K EI WG QIRSYV PY MVKD RTN E V+DG++D F+ A L + Sbjct: 309 GDKKEITWGSQIRSYVFTPYTMVKDHRTNFEVAQVDKVMDGEIDGFIDAYLKWR 362 >gi|241204131|ref|YP_002975227.1| peptide chain release factor 2 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858021|gb|ACS55688.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 376 Score = 275 bits (704), Expect = 6e-72, Method: Composition-based stats. Identities = 245/353 (69%), Positives = 298/353 (84%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + L DWD A++RL +LN K EDP+LW + EA+ LMRERQ LD+ I+ +K+ Sbjct: 11 ETKQAITLLRRHLDWDQAIRRLDWLNNKAEDPNLWNDASEAQKLMRERQQLDDGINGVKQ 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ +L DN+ L+EL EE D S+++E D L+ +K E +Q E++LSGEAD ND YLEV Sbjct: 71 LEQQLNDNIELIELGEEEGDQSVVKEAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H+GAGGTESQDWANMLLRMYTRWAE+++FK E LE+HDGEEAGIKSATLL+KG NAYGWL Sbjct: 131 HSGAGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDSN+RRHTSFSSIWVYPVVDDSI+IEI+ESDCRIDTYR+SGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG+VVQCQQERSQHKN+A+AW+MLRA++YE EL+KRE+ A+ + Sbjct: 251 HVNTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDMLRARMYEAELKKREDAASAEAA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 SKTEIGWG QIRSYVLQPYQMVKDLRT + ++P DVLDGDL++FM+A LA + Sbjct: 311 SKTEIGWGHQIRSYVLQPYQMVKDLRTGVASSAPDDVLDGDLNEFMEAALAHR 363 >gi|23099950|ref|NP_693416.1| peptide chain release factor RF-2 [Oceanobacillus iheyensis HTE831] gi|22778181|dbj|BAC14451.1| peptide chain release factor RF-2 [Oceanobacillus iheyensis HTE831] Length = 327 Score = 275 bits (704), Expect = 6e-72, Method: Composition-based stats. Identities = 164/325 (50%), Positives = 224/325 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ +++E + ++ + I++ L + + EL EE+D + + Sbjct: 1 MADPSFWDDQNKAQSVIQETNGIKEYVNGFETIEENLENLEVSYELVKEENDQELFADLD 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 LQ+ +V + + LLS D+N+A LE+H GAGGTESQDWA+MLLRMY RWAE+R Sbjct: 61 AELQQFITDVNQFELQLLLSEPYDANNAILELHPGAGGTESQDWASMLLRMYQRWAEERN 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAG+KS TL+IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGLKSVTLIIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + D ++I+I D ++DTYRASGAGGQHVNTTDSAVRITH+PT ++V CQ ERSQ Sbjct: 181 DVTPEMSDDVDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNIIVTCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML++KLY+LE++K+ + + + EIGWG QIRSYV PY MVKD RT+ Sbjct: 241 IKNREAAMKMLKSKLYQLEVEKQRQELDDIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTD 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGD++ F+ A L + Sbjct: 301 KETGNTQAVMDGDINPFIDAYLRSQ 325 >gi|59802262|ref|YP_208974.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA 1090] gi|194099790|ref|YP_002002925.1| peptide chain release factor 2 [Neisseria gonorrhoeae NCCP11945] gi|239999963|ref|ZP_04719887.1| peptide chain release factor 2 [Neisseria gonorrhoeae 35/02] gi|240013088|ref|ZP_04720001.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI18] gi|240017657|ref|ZP_04724197.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA6140] gi|240081863|ref|ZP_04726406.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA19] gi|240114140|ref|ZP_04728630.1| peptide chain release factor 2 [Neisseria gonorrhoeae MS11] gi|240116780|ref|ZP_04730842.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID18] gi|240119007|ref|ZP_04733069.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID1] gi|240122278|ref|ZP_04735240.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID24-1] gi|240122455|ref|ZP_04735411.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID332] gi|240126695|ref|ZP_04739581.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-92-679] gi|240127168|ref|ZP_04739829.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-93-1035] gi|254493466|ref|ZP_05106637.1| peptide chain release factor 2 [Neisseria gonorrhoeae 1291] gi|260441572|ref|ZP_05795388.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI2] gi|268595771|ref|ZP_06129938.1| peptide chain release factor 2 [Neisseria gonorrhoeae 35/02] gi|268597961|ref|ZP_06132128.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA19] gi|268600216|ref|ZP_06134383.1| peptide chain release factor 2 [Neisseria gonorrhoeae MS11] gi|268602456|ref|ZP_06136623.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID18] gi|268604723|ref|ZP_06138890.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID1] gi|268681042|ref|ZP_06147904.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID332] gi|268685277|ref|ZP_06152139.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-92-679] gi|268685523|ref|ZP_06152385.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-93-1035] gi|291044943|ref|ZP_06570652.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI2] gi|293398016|ref|ZP_06642222.1| peptide chain release factor 2 [Neisseria gonorrhoeae F62] gi|75432344|sp|Q5F5H5|RF2_NEIG1 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|238693228|sp|B4RQU4|RF2_NEIG2 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|59719157|gb|AAW90562.1| putative peptide chain release factor 2 [Neisseria gonorrhoeae FA 1090] gi|193935080|gb|ACF30904.1| PrfB [Neisseria gonorrhoeae NCCP11945] gi|226512506|gb|EEH61851.1| peptide chain release factor 2 [Neisseria gonorrhoeae 1291] gi|268549160|gb|EEZ44578.1| peptide chain release factor 2 [Neisseria gonorrhoeae 35/02] gi|268551749|gb|EEZ46768.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA19] gi|268584347|gb|EEZ49023.1| peptide chain release factor 2 [Neisseria gonorrhoeae MS11] gi|268586587|gb|EEZ51263.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID18] gi|268588854|gb|EEZ53530.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID1] gi|268621326|gb|EEZ53726.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID332] gi|268625561|gb|EEZ57961.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-92-679] gi|268625807|gb|EEZ58207.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-93-1035] gi|291011837|gb|EFE03833.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI2] gi|291611962|gb|EFF41031.1| peptide chain release factor 2 [Neisseria gonorrhoeae F62] gi|317165260|gb|ADV08801.1| peptide chain release factor 2 [Neisseria gonorrhoeae TCDC-NG08107] Length = 367 Score = 275 bits (703), Expect = 6e-72, Method: Composition-based stats. Identities = 171/351 (48%), Positives = 241/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ RL + +EDP LW + A+ + +E + L+ + + I Sbjct: 16 LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKESKILEGIVLTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+A+EE+D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ASGIEDNRMLIEMAVEENDEEGFAAVKEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365 >gi|126667155|ref|ZP_01738129.1| peptide chain release factor 2 [Marinobacter sp. ELB17] gi|126628311|gb|EAZ98934.1| peptide chain release factor 2 [Marinobacter sp. ELB17] Length = 351 Score = 275 bits (703), Expect = 6e-72, Method: Composition-based stats. Identities = 183/349 (52%), Positives = 245/349 (70%), Gaps = 1/349 (0%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 L GG+FD+D +RL+ + + E P +W++ A+ L +ER L+ +S I + Sbjct: 2 SALKRSGGIFDYDQRSERLTEVERELEMPSVWEDPERAQSLGKERSDLELIVSTIDRLTS 61 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 L D LLE+A+EEDD + + + ++L + +E +F + SGE D N+AYL++ AG Sbjct: 62 GLTDAEGLLEMAVEEDDEATVADIGNDLAEMDANLEKLEFRRMFSGEMDPNNAYLDIQAG 121 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 +GGTE+QDW NMLLRMY RWAE+R FK E +E+ +GE AGIKSATL I+G A+GWL+ E Sbjct: 122 SGGTEAQDWGNMLLRMYLRWAERRGFKAEIVELQEGEVAGIKSATLHIQGDYAFGWLRTE 181 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHRLVR SP+DS +RRHTSFSS++V P VDDS IEI+ +D R+D YRASGAGGQHVN Sbjct: 182 TGVHRLVRKSPFDSGNRRHTSFSSVFVAPEVDDSFVIEINPADLRVDVYRASGAGGQHVN 241 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T+SAVR+TH PTG+VV CQ RSQH+NK QA L+AKL+E E+Q R E SK+ Sbjct: 242 RTESAVRLTHNPTGIVVACQAGRSQHQNKDQAMKQLKAKLFEHEMQARNAEKQKLEDSKS 301 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +IGWG QIRSYVL +KDLRT +E ++ VLDGD+D F++A+L + Sbjct: 302 DIGWGSQIRSYVLDD-SRIKDLRTKVETSNTQSVLDGDIDKFIEASLKM 349 >gi|121608134|ref|YP_995941.1| peptide chain release factor 2 [Verminephrobacter eiseniae EF01-2] gi|121552774|gb|ABM56923.1| bacterial peptide chain release factor 2 (bRF-2) [Verminephrobacter eiseniae EF01-2] Length = 381 Score = 275 bits (703), Expect = 7e-72, Method: Composition-based stats. Identities = 163/346 (47%), Positives = 238/346 (68%), Gaps = 1/346 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD+D +RL ++ +DP +W + +A+ L +E++ LD+ +S + ++ L Sbjct: 35 KNYGGIFDYDAKFERLRTVDAALQDPAVWNDPKKAQALGKEKKSLDDVVSMLDKLGRELA 94 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 DN L E++ +E D + L R++ +E +F + S EAD+ + ++++ AGAGG Sbjct: 95 DNTELFEMSKQEGDDAGLLALQAEAARLRPGIEQLEFRRMFSKEADALNCFVDIQAGAGG 154 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DWA MLLR Y R+AE++ FK E G+ AG+KSAT+ ++G AYG L+ E GV Sbjct: 155 TEACDWAGMLLRQYLRYAERKGFKATVEEETPGDVAGLKSATIKVEGEYAYGLLRTETGV 214 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS+ RHTSF+S++VYP +DDSI+I+I+ +D R DT+R+SGAGGQH+N TD Sbjct: 215 HRLVRKSPFDSSGGRHTSFASLFVYPEIDDSIQIDINPADVRTDTFRSSGAGGQHINKTD 274 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+VVQCQ RSQH N+ AW LR++LY+ E + R++ E SKT++G Sbjct: 275 SAVRLTHLPTGIVVQCQDGRSQHGNRDIAWQRLRSRLYDHERRLRQQEQQKLEDSKTDVG 334 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYVL +KDLRT++E ++ VLDGDLD F++A L Sbjct: 335 WGHQIRSYVLD-NSRIKDLRTHVEISATQKVLDGDLDAFIEAALKQ 379 >gi|238916331|ref|YP_002929848.1| peptide chain release factor RF-2 [Eubacterium eligens ATCC 27750] gi|238871691|gb|ACR71401.1| peptide chain release factor RF-2 [Eubacterium eligens ATCC 27750] Length = 372 Score = 275 bits (703), Expect = 7e-72, Method: Composition-based stats. Identities = 171/350 (48%), Positives = 230/350 (65%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + + + D DN +R+ L E P W N +++ M+E + L +A E++ Sbjct: 15 DKPMAQIKKSLDLDNKQKRIEELEADMEAPGFWDNPDKSQNAMKELKGLKDAFERYNELE 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D L+E+A E +D S++ E + + ++ ++E + E+LLSGE D+ DA L +HA Sbjct: 75 TGLDDVKTLIEMAEESNDQSLIPEIEEEITNLEDKMESLRIETLLSGEHDACDAILTLHA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTES DW ML RMYTRWAE + TE L+ +GEEAGIKS T+ I+G NAYG LK Sbjct: 135 GAGGTESCDWCQMLFRMYTRWAESHGYTTETLDYLEGEEAGIKSVTIEIRGENAYGHLKS 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVRISP+++ +R TSF S V P ++ I+IEI++ D RIDTYR+SGAGGQH+ Sbjct: 195 EHGVHRLVRISPFNAAGKRQTSFVSCDVMPDINQDIDIEINDDDLRIDTYRSSGAGGQHI 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SA+RITH+PTG+VVQCQ ERSQH+NK +A ML+AKLY L+ + E + Sbjct: 255 NKTSSAIRITHLPTGIVVQCQNERSQHQNKDKAMQMLKAKLYLLKEAENAENLSGIRGDV 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +I +G QIRSYVLQPY MVKD RTN E + VLDG++D F+ A L Sbjct: 315 KDINFGSQIRSYVLQPYTMVKDNRTNKEVANAGSVLDGNIDPFINAYLTW 364 >gi|221639399|ref|YP_002525661.1| peptide chain release factor 2 [Rhodobacter sphaeroides KD131] gi|221160180|gb|ACM01160.1| Bacterial peptide chain release factor 2 [Rhodobacter sphaeroides KD131] Length = 375 Score = 275 bits (703), Expect = 8e-72, Method: Composition-based stats. Identities = 204/352 (57%), Positives = 244/352 (69%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + R L LG D + A RL + ED +LW + A+ LMRERQ L + +S K I Sbjct: 12 IRRSLALLGQRMDLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQLSTYKLI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN+ L+EL E D I+ E ++ + K+ E+LL GEAD ND +LE++ Sbjct: 72 DTGLRDNVELIELGEAEGDEEIVTEAEAAIRALVETARAKELEALLDGEADGNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMY RWAE++ +K E GEEAGIKSA I GPNAYGWLK Sbjct: 132 AGAGGTESCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIEI +D RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEIPANDIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT +VV +SQH+N+ A N L+A+LY+LEL KR N + Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREAAMNALKARLYQLELDKRNAAINAQHEA 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K E GWG QIRSYVLQPYQMVKDLRT +E + VLDGDLD FM+ATLA Sbjct: 311 KGEAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMQATLAQD 362 >gi|146308390|ref|YP_001188855.1| peptide chain release factor 2 [Pseudomonas mendocina ymp] gi|145576591|gb|ABP86123.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudomonas mendocina ymp] Length = 378 Score = 275 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 184/346 (53%), Positives = 243/346 (70%), Gaps = 1/346 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 + GG+FD+D+ RL +N + ED +W A+ L RER L + I ++ L Sbjct: 32 SQFGGIFDYDHKHDRLVEVNRELEDASVWNKPEYAQALGRERAMLAQIVETIDDLTGSLA 91 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D+ LLE+A EE+D + + ++R++ +E +F + SGE D N+ YL++ AG+GG Sbjct: 92 DSRDLLEMAAEENDEGAVNDIVAEVERLREILEKLEFRRMFSGEMDPNNCYLDIQAGSGG 151 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDWAN+LLRMY RWA+KR F +E+ +GE AGIK AT+ IKG A+GWL+ E GV Sbjct: 152 TEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLRTEIGV 211 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ +D RIDTYR+SGAGGQHVNTTD Sbjct: 212 HRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTD 271 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PT VV CQ ERSQH NK A MLRAKLYELE+QKR + E SK++IG Sbjct: 272 SAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDSKSDIG 331 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYVL +KDLRT +E++ VLDGDLD +++A+L Sbjct: 332 WGHQIRSYVLDD-SRIKDLRTGVERSDCQKVLDGDLDGYLEASLKQ 376 >gi|56964831|ref|YP_176562.1| peptide chain release factor 2 [Bacillus clausii KSM-K16] gi|56911074|dbj|BAD65601.1| peptide chain release factor 2 [Bacillus clausii KSM-K16] Length = 328 Score = 275 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 172/324 (53%), Positives = 220/324 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ ++ E L + K++ + D + EL EEDD + E Sbjct: 1 MADPDFWNDQEQAQAIINETNGLKEQVHTFKDMAESYDDLEVSYELVREEDDTELASELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L +K ++ + + LLS D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEKR Sbjct: 61 SGLAALKQKMNQFELQLLLSAPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEKRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L+ GEEAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FAVETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+++IE++ D +IDTYRASGAGGQHVNTTDSAVRITH+PT VV CQ ERSQ Sbjct: 181 EVMPELDDAVDIELNSEDLKIDTYRASGAGGQHVNTTDSAVRITHLPTNTVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA M++AKLY+L ++++E + EIGWG QIRSYV PY MVKD RT Sbjct: 241 IKNREQAMKMMKAKLYQLRIEEQERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + + V+DG++D F+ A L Sbjct: 301 FEIGNTNSVMDGEIDGFIDAYLRQ 324 >gi|313903604|ref|ZP_07836994.1| bacterial peptide chain release factor 2 (bRF-2) [Thermaerobacter subterraneus DSM 13965] gi|313466157|gb|EFR61681.1| bacterial peptide chain release factor 2 (bRF-2) [Thermaerobacter subterraneus DSM 13965] Length = 372 Score = 275 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 157/342 (45%), Positives = 215/342 (62%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 +FD + + + +P W + A+ +R+ + L + + + +L D +L Sbjct: 2 IFDLAGKRREIERIEQAMTEPGFWDDPERAQHQVRQLKVLKGPVERYEALDRQLEDLQVL 61 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 ELA EE D S++ E + + +++ + + E LL+G D DA + +H GAGGTESQD Sbjct: 62 AELAAEEADVSVIPELEEGIAQVEEGLRQLELELLLTGPYDGYDAIVSLHPGAGGTESQD 121 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA ML RMYTRWAE R ++ E L++ +GEEAGIKS T ++GPNAYG+L+ E GVHRLVR Sbjct: 122 WAQMLWRMYTRWAEDRGYQVEVLDLLEGEEAGIKSVTFAVRGPNAYGYLRSEHGVHRLVR 181 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+D+ RRHTSF+S+ V P + DS EIEI D RID +RA G GGQHVN T+SAVRI Sbjct: 182 ISPFDAAGRRHTSFASVDVLPDLGDSPEIEIRPEDLRIDVFRAGGHGGQHVNKTESAVRI 241 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 H+PTG+V CQ ERSQH N+ A +L+A+L ++R + EI WG QI Sbjct: 242 VHLPTGIVATCQNERSQHSNRETAMKILKARLARYYEEQRLKEIAALRGDVGEIAWGNQI 301 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RSYV QPY +VKD RT +E + V+DG LD F+ A L + Sbjct: 302 RSYVFQPYTLVKDHRTGVEVGNVQAVMDGQLDVFINAYLKWE 343 >gi|126462391|ref|YP_001043505.1| peptide chain release factor 2 [Rhodobacter sphaeroides ATCC 17029] gi|126104055|gb|ABN76733.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodobacter sphaeroides ATCC 17029] Length = 375 Score = 275 bits (702), Expect = 8e-72, Method: Composition-based stats. Identities = 203/352 (57%), Positives = 245/352 (69%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + R L LG D + A RL + ED +LW + A+ LMRERQ L + +S + I Sbjct: 12 IRRSLALLGQRMDLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQLSTYRLI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN+ L+EL E D I+ E +++ + K+ E+LL GEAD ND +LE++ Sbjct: 72 DTGLRDNVELIELGEAEGDEEIVTEAEASIRALVETAGAKELEALLDGEADGNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMY RWAE++ +K E GEEAGIKSA I GPNAYGWLK Sbjct: 132 AGAGGTESCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIEI +D RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEIPANDIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT +VV +SQH+N+ A N L+A+LY+LEL KR N + Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREAAMNALKARLYQLELDKRNAAINAQHEA 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K E GWG QIRSYVLQPYQMVKDLRT +E + VLDGDLD FM+ATLA Sbjct: 311 KGEAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMQATLAQD 362 >gi|313901293|ref|ZP_07834780.1| peptide chain release factor 2 [Clostridium sp. HGF2] gi|312953901|gb|EFR35582.1| peptide chain release factor 2 [Clostridium sp. HGF2] Length = 349 Score = 275 bits (702), Expect = 9e-72, Method: Composition-based stats. Identities = 149/346 (43%), Positives = 210/346 (60%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + L FD ++ L + T W + A+ L+R+ + + + +++ L Sbjct: 1 MRSLVSHFDLAEKKHKIQELTSMTLQDDFWNDPQHAQTLIRQLNGIKDIVESYEKLNSAL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 +L E+ D I + ++ + + + LLS E D + A LE+H GAG Sbjct: 61 IGLEETHDLLKEDYDDEIFELFEAEYLEMEKNFDDFEIKILLSHEYDHSSAILELHPGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTES DWA+ML RMY+RWAEK+ FK L+ G+EAGIKS T L++G AYG+LK E+G Sbjct: 121 GTESCDWADMLYRMYSRWAEKKGFKVSVLDYLPGDEAGIKSVTFLVEGDMAYGYLKAEKG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+DS RRHTSF+S+ V P ++ IEIEI D ++T RASGAGGQH+N T Sbjct: 181 VHRLVRISPFDSGGRRHTSFASLDVMPQFNNEIEIEIKPEDLIVETKRASGAGGQHINKT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVR+ H PTG+V CQ RSQH+N+ +A +L+++LY+ ++++E + + Sbjct: 241 DSAVRMVHKPTGLVAICQNGRSQHENREEALRVLKSRLYQKMIEEQEARLAEIKGEQKAN 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYV PY MVKD RT+ E + V+DGDLD F+ A L Sbjct: 301 EWGSQIRSYVFHPYSMVKDHRTSCETSDVQGVMDGDLDAFIFAYLK 346 >gi|28377601|ref|NP_784493.1| peptide chain release factor 2 [Lactobacillus plantarum WCFS1] gi|38258340|sp|Q88YL5|RF2_LACPL RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|28270434|emb|CAD63336.1| peptide chain release factor 2, C-terminal fragment [Lactobacillus plantarum WCFS1] Length = 357 Score = 275 bits (702), Expect = 9e-72, Method: Composition-based stats. Identities = 170/347 (48%), Positives = 220/347 (63%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 LGG FD D + + + +P W + A+ ++ E L K++ D + Sbjct: 4 TTLGGRFDLDALNESIQENEARMAEPGFWDDQAAAQKVIDENNVLKGKYDTFKQLADEVG 63 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D + EL EE D + E + Q + +++ + LL G D N+A LE+H GAGG Sbjct: 64 DLAVAYELLSEEPDAEMQAEFETDFQHAEHDLQQYRLNLLLDGPYDRNNAILEIHPGAGG 123 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TESQDW MLLRMYTRWA FK E ++ G+EAGIKS TLLI G NAYG+L+ E+GV Sbjct: 124 TESQDWGAMLLRMYTRWAASHNFKVETVDYQAGDEAGIKSVTLLISGHNAYGYLRSEKGV 183 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVRISP+D+ RRHTSF+S+ V P +DD+++++I D +ID YRASGAGGQHVN T Sbjct: 184 HRLVRISPFDAAGRRHTSFASVDVMPELDDTVDVDIRPEDLKIDVYRASGAGGQHVNKTS 243 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VV Q +RSQ +N+ A NMLRAKLYE E +K+ + + + +IG Sbjct: 244 SAVRITHVPTGIVVASQAQRSQLQNRQTALNMLRAKLYEREEEKKAKERAAIQGEQMDIG 303 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYV PY MVKD RTN E V+DGDLD FM A L K Sbjct: 304 WGSQIRSYVFHPYTMVKDHRTNYESHHGQAVMDGDLDPFMDAYLQWK 350 >gi|229829544|ref|ZP_04455613.1| hypothetical protein GCWU000342_01640 [Shuttleworthia satelles DSM 14600] gi|229791533|gb|EEP27647.1| hypothetical protein GCWU000342_01640 [Shuttleworthia satelles DSM 14600] Length = 379 Score = 275 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 161/350 (46%), Positives = 234/350 (66%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 L + D ++ Q++ LN + E P W + + M+E + L + + +++ Sbjct: 16 KEPLAEVTRALDLESKHQKIEELNREMEAPDFWNDADLSARKMKELKSLKDDVEIADKLK 75 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + + + +L+++A EEDD ++ E + ++K + E + ++LLSGE D+N+A + +HA Sbjct: 76 NSIEEIGMLMDMANEEDDADMVGEIRLMMDQMKEDFERVRIKTLLSGEFDANNAIVTLHA 135 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+ DW ML RMYTRWA + F+ E L+ DG+EAGIK+ T + G NAYG+LK Sbjct: 136 GAGGTEACDWTAMLYRMYTRWAAAQGFEVEELDYLDGDEAGIKAVTFQVNGENAYGYLKS 195 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+++N +R TSFSS V P ++ +++E+ + D RIDTYR+SGAGGQH+ Sbjct: 196 EKGVHRLVRISPFNANGKRQTSFSSCDVMPELEQDLDVEVKDEDIRIDTYRSSGAGGQHI 255 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SA+RITH PTG+VVQCQ ERSQH NK +A ML+AKLY L++++++ A Sbjct: 256 NKTSSAIRITHFPTGIVVQCQNERSQHMNKDKAMQMLKAKLYMLKMEEQKAKAEGIRGEV 315 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 T+I WG QIRSYV QPY MVKDLRT E + S V+DGD++ F+ A L Sbjct: 316 TDIAWGNQIRSYVFQPYTMVKDLRTGEETGNVSAVMDGDINLFINAYLRW 365 >gi|294788774|ref|ZP_06754015.1| peptide chain release factor 2 [Simonsiella muelleri ATCC 29453] gi|294483256|gb|EFG30942.1| peptide chain release factor 2 [Simonsiella muelleri ATCC 29453] Length = 367 Score = 275 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 167/351 (47%), Positives = 243/351 (69%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+++ + D+ +RL + +EDP LW + A+ + +ER+ L+ + + + Sbjct: 16 LAQRNRDIRDYMDYQGKKERLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTMDNL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ + DN L+++ +EE+D ++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ENGIADNRELIDMVVEENDTDGFAAIIADVADLETQMAALEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK + LE DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKLDILEEDDGEIAGINRATIRVEGKYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+D+N++RHTSF+S++VYP VDDSIEI+I+ +D RIDTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDANNKRHTSFASVFVYPEVDDSIEIDINPADLRIDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH PTG+VVQCQ +RSQH NKA A MLR+KL+ELE++KR E E Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLRSKLFELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365 >gi|71733798|ref|YP_276012.1| peptide chain release factor 2, programmed frameshift [Pseudomonas syringae pv. phaseolicola 1448A] gi|71554351|gb|AAZ33562.1| peptide chain release factor 2, programmed frameshift [Pseudomonas syringae pv. phaseolicola 1448A] Length = 368 Score = 275 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 184/351 (52%), Positives = 248/351 (70%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + G D+D+ RL+ +N + EDP++W N A+ L RER L + + E+ Sbjct: 17 LSERSETIRGYLDYDHKHDRLTEVNRELEDPNVWNNPTYAQELGRERSLLAQIVETLDEM 76 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LL ++ EE+D + + + + ++R++ +E +F + SGE D N+AYL++ Sbjct: 77 SSGLADAKDLLLMSAEEEDQAAVDDVAAEVERLRESLEKLEFRRMFSGEMDPNNAYLDIQ 136 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWAN+LLRMY RWA+KR F +E+ GE AGIK AT+ IKG A+GWL+ Sbjct: 137 AGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLR 196 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ SD RIDTYR+SGAGGQH Sbjct: 197 TEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRSSGAGGQH 256 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT VV CQ ERSQH NK A MLRA+LYE E+QKR + E + Sbjct: 257 VNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDT 316 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRTNIE++ VLDGD+D+++ A+L Sbjct: 317 KSDIGWGHQIRSYVLD-ASRIKDLRTNIERSDCDKVLDGDIDEYLIASLKQ 366 >gi|315924849|ref|ZP_07921066.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus ATCC 23263] gi|315621748|gb|EFV01712.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus ATCC 23263] Length = 369 Score = 275 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 183/352 (51%), Positives = 237/352 (67%), Gaps = 3/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + +L LG D RLS L T++EDP W + A+ +++E+ L S E+ Sbjct: 14 MDAELTALGKSMDLPAIDARLSALMTQSEDPAFWNDQKSAQKVLKEQTILKRKRSRYDEV 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L D ++ ELA E + L + + E + E LLSGE DSN+A + +H Sbjct: 74 KEELDDVSVMYELAEEGEGMDE---LEQMLGAFQEKFEDFKLEMLLSGEYDSNNAIISLH 130 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA+MLLRMYTRWAE R +K + L+ G+ AGIKSATLLI+G NAYG+LK Sbjct: 131 PGAGGTESHDWASMLLRMYTRWAEARGYKIKQLDYQPGDIAGIKSATLLIEGINAYGYLK 190 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS+ RRHTSF+S+ V P VDDS+EIEI+ D R+DTYR+SGAGGQH Sbjct: 191 TERGVHRLVRISPFDSSGRRHTSFASLDVTPEVDDSVEIEINPDDIRVDTYRSSGAGGQH 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T SA+RITH+PTGVVVQCQ ERSQH+N+ A NML++KL E+ Q+++E Sbjct: 251 VNKTSSAIRITHLPTGVVVQCQNERSQHQNREVAMNMLKSKLVEIMAQEQKEKLEDVVGD 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 ++I WG QIRSYV PY MVKD RT +E + V+DGDLD FM A L + Sbjct: 311 YSQIAWGSQIRSYVFHPYTMVKDHRTGVEVGNIQTVMDGDLDRFMNAELRKE 362 >gi|163739752|ref|ZP_02147160.1| peptide chain release factor 2 [Phaeobacter gallaeciensis BS107] gi|163741027|ref|ZP_02148420.1| peptide chain release factor 2 [Phaeobacter gallaeciensis 2.10] gi|161386018|gb|EDQ10394.1| peptide chain release factor 2 [Phaeobacter gallaeciensis 2.10] gi|161386982|gb|EDQ11343.1| peptide chain release factor 2 [Phaeobacter gallaeciensis BS107] Length = 374 Score = 275 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 202/351 (57%), Positives = 251/351 (71%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L L DW+ A RL N + EDP+LW + A+ LMR+RQ L +AI K I Sbjct: 12 IEKSLELLAQRLDWETAEFRLEEFNARVEDPNLWDDADAAQALMRDRQMLVDAIDTYKSI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L DN+ L+EL E+D ++ + L+ +K + K+ E+LL GEADSND +LE++ Sbjct: 72 KQDLSDNMELIELGEMEEDAEVISDAEAALKTLKEKAAEKELEALLDGEADSNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMY RWAEK+ +K E GEEAGIKSA I G NAYGWLK Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGEEAGIKSAAYKISGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS ++RHTSFSS+WVYPVVDD+IEI+++ SD RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDSAAKRHTSFSSVWVYPVVDDNIEIDVNPSDIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY+LEL +R N + Sbjct: 252 VNTTDSAVRITHEPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQLELDRRNADINAAHEA 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K + GWG QIRSYVLQPYQMVKDLRT+ E + VLDGDLD FM ATLA+ Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTKGVLDGDLDGFMAATLAL 361 >gi|320530290|ref|ZP_08031358.1| peptide chain release factor 2 [Selenomonas artemidis F0399] gi|320137433|gb|EFW29347.1| peptide chain release factor 2 [Selenomonas artemidis F0399] Length = 368 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 173/352 (49%), Positives = 233/352 (66%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L+ + + ++++ L K +P W + A+ + +E L + K + Sbjct: 12 LGEKLDQMRISLEIPAKEEKIAELEYKMSEPTFWDDAAAAQKVNQELAGLKGGVDTYKAL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L E+ +EE+D ++ + L I +E Q E LLSGE D+N+A L +H Sbjct: 72 AAKYEDAETLYEMGIEENDPTMEGDIRAELDAIAEGLETLQLEVLLSGEYDANNAILTLH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDW MLLRMY RWAE+ F E ++ G+EAG+KSA+L IKG NAYG+LK Sbjct: 132 AGAGGTEAQDWTQMLLRMYGRWAERHGFSVETADLQPGDEAGVKSASLFIKGHNAYGFLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS +RRHTSFS+ V P +DD++E++I D R+D YRASGAGGQH Sbjct: 192 SEKGVHRLVRISPFDSQARRHTSFSACDVMPEIDDAVEVDIDMDDVRVDYYRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T SAVR+TH PTG+VVQCQ ERSQ +NK Q MLRAKL+ELE +K+EE E Sbjct: 252 INKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCLKMLRAKLFELEQEKKEEELAKLEGV 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +I WG QIRSYV QPY MVKD+RTN E + V+DG++D F++A L K Sbjct: 312 QQKIEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGEIDPFIRAYLNAK 363 >gi|293400349|ref|ZP_06644495.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306749|gb|EFE47992.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 346 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 152/341 (44%), Positives = 209/341 (61%) Query: 12 GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 FD ++ L KT + W + +A++++R+ + + + +Q L Sbjct: 2 SHFDLTARRYKIQELTAKTLEESFWNDPQKAQVVIRQLNAIKDVVDSYDALQKALNSLDE 61 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EL E+ D I + Q ++ + + LLS E D + A LE+H GAGGTES Sbjct: 62 TQELLKEDFDEEIFELFELEYQEMEKNFADFEIKVLLSHEYDHSSAILELHPGAGGTESC 121 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+ML RMY+RWAEK +FK L+ G+EAGIKS T L++G AYG+LK E+GVHRLV Sbjct: 122 DWADMLYRMYSRWAEKHEFKVSVLDYQPGDEAGIKSITFLVEGDMAYGYLKAEKGVHRLV 181 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RISP+D+ RRHTSF+S+ V P +D IEIEI D ++T RASGAGGQH+N TDSAVR Sbjct: 182 RISPFDAGGRRHTSFASLDVMPQFNDEIEIEIKPEDLIVETKRASGAGGQHINKTDSAVR 241 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 + H PTG+V CQ RSQH+N+ +A +L+++LY+ ++++E + WG Q Sbjct: 242 MVHKPTGLVATCQNGRSQHENREEALRVLKSRLYQKMIEEQEAKLAEIKGEVKANEWGSQ 301 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IRSYV PY MVKD RTN E + V+DGDLD F+ A L Sbjct: 302 IRSYVFHPYSMVKDHRTNHETSDVQGVMDGDLDGFIFAYLK 342 >gi|288554120|ref|YP_003426055.1| peptide chain release factor 2 [Bacillus pseudofirmus OF4] gi|288545280|gb|ADC49163.1| peptide chain release factor 2 [Bacillus pseudofirmus OF4] Length = 328 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 166/323 (51%), Positives = 222/323 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + A+ ++ E L ++ E++++ + + EL EE D + +E Sbjct: 1 MTAPDFWDDQEAAQTVINESNGLKEQVNVFLELEEKYENLEVSYELVKEEADEELEKELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + + + + LLS D N+A LE+H GAGGTESQDWA+MLLRMYTRW+E+R Sbjct: 61 AGVKELISRLNDFELQLLLSEPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWSEQRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETMDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD++EI+I D ++DTYRASGAGGQH+NTTDSA+RITH+PT VV CQ ERSQ Sbjct: 181 EVMPELDDNVEIDIRTEDLKVDTYRASGAGGQHINTTDSAIRITHLPTNTVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML+AKLY+LE++K+++ + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNRDQAMKMLKAKLYQLEIEKQQQELAEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E + + V+DGDLD F+ A L Sbjct: 301 FEIGNTNAVMDGDLDGFINAYLR 323 >gi|291486081|dbj|BAI87156.1| hypothetical protein BSNT_05369 [Bacillus subtilis subsp. natto BEST195] Length = 327 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 167/325 (51%), Positives = 218/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ ++ E L + ++ K++ + + + +L EE D + E Sbjct: 1 MADPEFWNDQQKAQTVINEANGLKDYVNSYKKLNESHEELQMTHDLLKEEPDTDLQLELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L+ + + + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRW E+R Sbjct: 61 KELKSLTKDFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGERRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D I+I+I D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ Sbjct: 181 EVMPEFNDEIDIDIRAEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A ML+AKLY+ +++++ + + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 IKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGD+D F+ A L K Sbjct: 301 TEMGNVQAVMDGDIDTFIDAYLRSK 325 >gi|270290715|ref|ZP_06196939.1| peptide chain release factor 2 [Pediococcus acidilactici 7_4] gi|270280775|gb|EFA26609.1| peptide chain release factor 2 [Pediococcus acidilactici 7_4] Length = 343 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 165/328 (50%), Positives = 218/328 (66%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 K +P W + +A+ ++ E L K + D + + + LEL E D + Sbjct: 9 EAKMAEPDFWNDQEKAQKIINETNVLKAKYDNFKNLTDHVENLEVTLELLEMEADPDVQA 68 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E D L + + + LL+G+ D+N+A LE+H GAGGTESQDW +MLLRMYTRWAE Sbjct: 69 EFEDELSQTAKLLRDYRLGLLLNGKYDANNAILEIHPGAGGTESQDWGSMLLRMYTRWAE 128 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + +FK + + GE AGI S T+ + G NAYG+L+ E+GVHRLVR+SP+DS RRHTSF Sbjct: 129 QHQFKVQIEDYQAGEVAGISSVTIRVMGHNAYGYLRSEKGVHRLVRLSPFDSAGRRHTSF 188 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S+ V P +DDS+E+ I+ D R+D YR+SGAGGQH+N T SAVRITH+PTG+VV Q E Sbjct: 189 ASVDVMPELDDSVEVNINPDDLRVDVYRSSGAGGQHINKTSSAVRITHLPTGIVVASQAE 248 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQ +N+ A NML+AKL+ELE QK+ E E ++ EIGWG QIRSYV PY MVKD Sbjct: 249 RSQLQNRVTAMNMLKAKLFELEEQKKAEEKAKLEGTQLEIGWGSQIRSYVFHPYSMVKDH 308 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RTN+E + V+DGDLDDF+ A L K Sbjct: 309 RTNLETANVQGVMDGDLDDFINAYLQWK 336 >gi|90409172|ref|ZP_01217287.1| putative peptide chain release factor 2 [Psychromonas sp. CNPT3] gi|90309717|gb|EAS37887.1| putative peptide chain release factor 2 [Psychromonas sp. CNPT3] Length = 349 Score = 274 bits (701), Expect = 1e-71, Method: Composition-based stats. Identities = 173/342 (50%), Positives = 241/342 (70%), Gaps = 1/342 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D V+RL + + E P +W + A+ L +ER L+ + IK ++ + L Sbjct: 6 GGIFDYDVKVERLEEVTRELESPEVWNDPERAQALGKERSALELIVETIKALEIGCDEIL 65 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +L+ELA++E D E ++ ++ ++E +F + SG+ DS YL++ +G+GGTE+ Sbjct: 66 MLVELAVDEQDQDTFDEAANETLELEKKLEVLEFRRMFSGKNDSCSCYLDIQSGSGGTEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWANMLLRMY RW E +KTE +E+ G+ AGIK AT+ G AYGWL+ E GVHRL Sbjct: 126 QDWANMLLRMYLRWGEANGYKTELMEVSAGDVAGIKGATIRFSGEYAYGWLRTETGVHRL 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS+ +RHTSF+S +VYP V+D+I+I I+ ++ RID YRASGAGGQHVNTT+SAV Sbjct: 186 VRKSPFDSSGKRHTSFASAFVYPEVEDNIDIVINPAELRIDVYRASGAGGQHVNTTESAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH+PT +VVQCQ +RSQHKNK QA L+AKLYE E+Q + I E +K++IGWG Sbjct: 246 RITHLPTNIVVQCQNDRSQHKNKDQAMKQLKAKLYEHEVQIQNVEKQISEDNKSDIGWGS 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT +E +P VLDG+L++F++A+L Sbjct: 306 QIRSYVLDD-ARIKDLRTGVESRNPQRVLDGELNEFIEASLK 346 >gi|260887225|ref|ZP_05898488.1| peptide chain release factor 2 [Selenomonas sputigena ATCC 35185] gi|260863287|gb|EEX77787.1| peptide chain release factor 2 [Selenomonas sputigena ATCC 35185] Length = 330 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 175/325 (53%), Positives = 227/325 (69%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N EA+ + +E + ++ KEI + D LLE+ALEE+D S+ E Sbjct: 1 MGEPTFWDNAEEAQKINQELAAIKGSVDKYKEIVSKTDDAQALLEMALEENDTSLEPEVQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + IK V + E LLSG D+N+A L +HAGAGGTE+QDW MLLRMY RWAE+ Sbjct: 61 TEFETIKTAVRELELEVLLSGPYDANNAILTLHAGAGGTEAQDWTQMLLRMYGRWAERHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F ++ G+EAG+KSATL I G NAYG+LK E+GVHRLVRISP+DSN+RRHTSFS+ Sbjct: 121 FSVVTADLLPGDEAGVKSATLFINGHNAYGYLKSEKGVHRLVRISPFDSNARRHTSFSAC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + P +DD++E+ I+ +D R+DTYRASGAGGQH+N T SAVR+TH+PTG+VVQCQ ERSQ Sbjct: 181 DIMPEIDDAVEVAINMADVRVDTYRASGAGGQHINKTSSAVRMTHMPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ Q MLRAKL+ELE +K+E E + +I WG QIRSYV QPY MVKD+RT Sbjct: 241 LQNREQCMKMLRAKLFELEQEKKEAEIQKLEGDQQKIEWGSQIRSYVFQPYTMVKDMRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DGDLD F++A LA K Sbjct: 301 METGNVQAVMDGDLDAFIEAFLAAK 325 >gi|205375066|ref|ZP_03227857.1| hypothetical protein Bcoam_18782 [Bacillus coahuilensis m4-4] Length = 327 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 170/325 (52%), Positives = 217/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ L+ E L + + + + + + EL EE D +L E Sbjct: 1 MVDPDFWNDQQKAQGLINEANGLKDMVGQYHSMVEAHENLEVTFELVKEEGDEELLAELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L + ++ + + LLS E D N+A LE+H GAGGTESQDW +MLLRMYTRWAEK+ Sbjct: 61 PELNDLTKQLNNYELQLLLSEEYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGIKSVTLSIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D IEI+I D +IDTYRASGAGGQH+NTTDSAVRITH+PT VV CQ ERSQ Sbjct: 181 EVMPEFNDEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNTVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML++KLY+L+++++E + +IGWG QIRSYV PY MVKD RTN Sbjct: 241 IKNREAAMKMLKSKLYQLKIEEQEAQLAEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + + V+DGDLD F+ A L + Sbjct: 301 TEVGNTNSVMDGDLDVFIDAYLRSR 325 >gi|77463535|ref|YP_353039.1| peptide chain release factor 2 [Rhodobacter sphaeroides 2.4.1] gi|332558415|ref|ZP_08412737.1| peptide chain release factor 2 [Rhodobacter sphaeroides WS8N] gi|77387953|gb|ABA79138.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodobacter sphaeroides 2.4.1] gi|332276127|gb|EGJ21442.1| peptide chain release factor 2 [Rhodobacter sphaeroides WS8N] Length = 375 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 203/352 (57%), Positives = 245/352 (69%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + R L LG D + A RL + ED +LW + A+ LMRERQ L + +S + I Sbjct: 12 IRRSLALLGQRMDLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQLSTYRLI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN+ L+EL E D I+ E +++ + K+ E+LL GEAD ND +LE++ Sbjct: 72 DTGLRDNVELIELGEAEGDEEIVTEAEASIRALVETARAKELEALLDGEADGNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMY RWAE++ +K E GEEAGIKSA I GPNAYGWLK Sbjct: 132 AGAGGTESCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIEI +D RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEIPANDIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT +VV +SQH+N+ A N L+A+LY+LEL KR N + Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREAAMNALKARLYQLELDKRNAAINAQHEA 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K E GWG QIRSYVLQPYQMVKDLRT +E + VLDGDLD FM+ATLA Sbjct: 311 KGEAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMQATLAQD 362 >gi|269469023|gb|EEZ80587.1| protein chain release factor B [uncultured SUP05 cluster bacterium] Length = 364 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 176/351 (50%), Positives = 238/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+++ + L D + RL + + E+P +W N EA+ L +E+ L+ Sbjct: 13 LTQRSSALSAHLDLEEKQGRLEEVLLEMENPDIWSNPDEAQALGQEKSKLELICQTFARA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LLE+A E+D + +L ++L +E +FE + SGE D+N AYL++ Sbjct: 73 NSILEDAKELLEMAQSENDKDTVNSVIGDLNTVELSIEKLEFERMFSGELDANSAYLDIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +G+GGTE+QDWA M+LRMY RW EK KFK + +E+ GE AGIKSAT+ G A+GWL+ Sbjct: 133 SGSGGTEAQDWAEMILRMYLRWGEKHKFKVKLMEVSAGEVAGIKSATIHFNGEYAFGWLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+++N +RHTSFSS++V P +DD+IEI I+ SD RIDTYRASGAGGQH Sbjct: 193 SEIGIHRLVRKSPFNANGKRHTSFSSVFVSPEIDDNIEININPSDLRIDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH+PT VVQCQ RSQH NK QA L++KLYELE+Q+R + E + Sbjct: 253 VNKTESAVRITHLPTNTVVQCQDGRSQHANKDQAMKQLKSKLYELEMQERNKEKQDLEDT 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E T+ DVLDG+LD F++A+L Sbjct: 313 KSDIGWGHQIRSYVLD-QSRIKDLRTGVESTNTQDVLDGNLDKFIEASLKA 362 >gi|316940875|gb|ADU74909.1| Peptide chain release factor 2 [Clostridium thermocellum DSM 1313] Length = 375 Score = 274 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 166/349 (47%), Positives = 234/349 (67%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + L+ +G D + ++ L K +P W + ++ ++++ + L + + ++ Sbjct: 15 KQNLDEMGKSLDIASIGNQIEELEQKASEPDFWNDTENSQKILQKIKSLRSKVERYNKLV 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D + L EL +EE D S++ E + + K E E + E+LL+G+ D N+A L +HA Sbjct: 75 SQWEDLITLCELGIEEQDESVIPEAVEGFKAFKKEFEALRLETLLTGQYDKNNAILTLHA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+QDW ML RMYTRWAEK+ F + L+ DGEEAGIKS T + G NAYG+LK Sbjct: 135 GAGGTEAQDWVQMLFRMYTRWAEKKGFTVKVLDYLDGEEAGIKSVTFQVIGENAYGFLKS 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+D++ RRHTSF+S+ V P ++D IE+ I+ D RIDTYR+SGAGGQH+ Sbjct: 195 EKGVHRLVRISPFDASGRRHTSFASLDVMPELNDDIEVHINPDDLRIDTYRSSGAGGQHI 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRITHIPTG+VV CQ ERSQ +NK A ML+AKL EL+ ++ +E + + Sbjct: 255 NKTESAVRITHIPTGIVVSCQSERSQFQNKDTAMKMLKAKLMELKERENKEKIEDLKGIQ 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 EI WG QIRSYV PY +VKD RTN E+ + V+DG+LD F+ + L+ Sbjct: 315 LEIAWGSQIRSYVFCPYTLVKDHRTNYEEINVDAVMDGELDGFINSYLS 363 >gi|221311479|ref|ZP_03593326.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis str. 168] gi|221315806|ref|ZP_03597611.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320721|ref|ZP_03602015.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis str. JH642] gi|221325006|ref|ZP_03606300.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis str. SMY] gi|321313075|ref|YP_004205362.1| peptide chain release factor 2 [Bacillus subtilis BSn5] gi|320019349|gb|ADV94335.1| peptide chain release factor 2 [Bacillus subtilis BSn5] Length = 327 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 168/325 (51%), Positives = 218/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ ++ E L + ++ K++ + + + +L EE D + E Sbjct: 1 MADPEFWNDQQKAQTVINEANGLKDYVNSYKKLNESHEELQMTHDLLKEEPDTDLQLELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L+ + E + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRW E+R Sbjct: 61 KELKSLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGERRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D I+I+I D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ Sbjct: 181 EVMPEFNDEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A ML+AKLY+ +++++ + + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 IKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGD+D F+ A L K Sbjct: 301 TEMGNVQAVMDGDIDTFIDAYLRSK 325 >gi|56697430|ref|YP_167798.1| peptide chain release factor 2 [Ruegeria pomeroyi DSS-3] gi|56679167|gb|AAV95833.1| peptide chain release factor 2 [Ruegeria pomeroyi DSS-3] Length = 375 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 200/352 (56%), Positives = 248/352 (70%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L L D + A RL N + EDP+LW N A+ LMRERQ L +A+ K I Sbjct: 12 IQKSLRLLAQRMDQETAQHRLEEFNARVEDPNLWDNPENAQKLMRERQTLVDALDIYKGI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L DN+ L+EL EDD ++++ L+ ++ K+ E+LL GEAD ND +LE++ Sbjct: 72 ETDLADNIELIELGEMEDDQDVIKDAEAALKALRERAAEKELEALLDGEADGNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMY RWAEK+ +K E G+EAGIKSA I G NAYGWLK Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGDEAGIKSAAYKISGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYD+ ++RHTSFSS+WVYPVVDD+IEIE++ SD RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDAAAKRHTSFSSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV E+SQH+N+ A L+++LY+ EL +R N + Sbjct: 252 VNTTDSAVRITHIPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQQELDRRNAEINAAHEA 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K + GWG QIRSYVLQPYQMVKDLRT E + VLDG LD FM ATLA+K Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTGHETSDTKGVLDGALDGFMAATLAMK 362 >gi|114771120|ref|ZP_01448560.1| peptide chain release factor 2 [alpha proteobacterium HTCC2255] gi|114548402|gb|EAU51288.1| peptide chain release factor 2 [alpha proteobacterium HTCC2255] Length = 375 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 200/354 (56%), Positives = 262/354 (74%), Gaps = 1/354 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 +++ + L L DWD A R+ + +E+P LW N +A+ LMRERQ L ++IS K Sbjct: 10 VEIHKSLELLKQRMDWDTAEHRMEEFDAMSENPDLWNNPEKAQKLMRERQMLSDSISNFK 69 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 E+ L DN+ L+EL E+D I++E +N+ I+ E ++ E+LL+GE DSND +L+ Sbjct: 70 ELSSNLQDNIELIELGEIEEDEVIIKEAENNILIIQQESAKQELEALLNGEVDSNDTFLQ 129 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 ++AGAGGTES DWANML RMY RWAE++ ++ + +E G+EAGIKS T IKG NAYGW Sbjct: 130 INAGAGGTESCDWANMLARMYVRWAEQKGYQVDRMEESVGDEAGIKSVTYQIKGHNAYGW 189 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 +K E GVHRLVRISP+DSN++RHTSFSS+WVYPVVDD+I+IEI+ S+ R+DTYR+SGAGG Sbjct: 190 MKSESGVHRLVRISPFDSNAKRHTSFSSVWVYPVVDDNIDIEINPSEIRVDTYRSSGAGG 249 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVNTTDSAVRITHIPT +VVQ E+SQH+N+A L+++LYELE++KR E Sbjct: 250 QHVNTTDSAVRITHIPTNIVVQSS-EKSQHQNRANCMAALKSRLYELEMRKRTEGIQEAH 308 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +K + GWG QIRSYVL PYQMVKDLRTN+E + VL+GDLD FM ATLA+ Sbjct: 309 DNKGDAGWGNQIRSYVLHPYQMVKDLRTNVETSDSQGVLNGDLDMFMAATLALD 362 >gi|33596662|ref|NP_884305.1| peptide chain release factor 2 [Bordetella parapertussis 12822] gi|81579293|sp|Q7W8T4|RF2_BORPA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|33573363|emb|CAE37347.1| peptide chain release factor 2 [Bordetella parapertussis] Length = 367 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 170/350 (48%), Positives = 248/350 (70%), Gaps = 1/350 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + + L D+D +RL +N + EDP +W + A+ L RE++ L++ + + E+ Sbjct: 17 AEREQALRRYLDYDAKSERLQVVNAELEDPAIWNDPKHAQDLGREKKSLEDVVETLTELG 76 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D+ L+ELAL + D + L+ ++ R + ++E +F + + AD + ++++ A Sbjct: 77 SGLADSCELVELALADSDDATLEAIEHDVDRFQEKLETLEFRRMFANPADPLNCFVDIQA 136 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+QDWA+MLLR Y ++AE++ FK E LE +G+ AG+KSAT+ I+G A+G+L+ Sbjct: 137 GAGGTEAQDWASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFGYLRT 196 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS+ RHTSF+S++VYP VD+S E+E++ +D RIDTYRASGAGGQH+ Sbjct: 197 ETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRIDTYRASGAGGQHI 256 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N TDSAVRITH P+G+VVQCQ +RSQH+N+A+A ML++KLYELE++ R E SK Sbjct: 257 NKTDSAVRITHAPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMTEQQKLEDSK 316 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 T++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 317 TDVGWGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQ 365 >gi|121535512|ref|ZP_01667321.1| peptide chain release factor 2 [Thermosinus carboxydivorans Nor1] gi|121305931|gb|EAX46864.1| peptide chain release factor 2 [Thermosinus carboxydivorans Nor1] Length = 332 Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 169/326 (51%), Positives = 229/326 (70%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 K P W + EA+ + +E L ++IS ++++ R D L +L ++E D S+ Sbjct: 2 EHKMSAPDFWDDPAEAQKIAQEVTALKDSISQYQQLRSRHSDVAALWQLGMDEGDDSVYD 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E + L+ + ++E + LL+GE D+N+A L +HAGAGGTE+QDWA MLLRMY RWAE Sbjct: 62 EVAAELRALAKDLEQLELTVLLTGEYDANNAILTLHAGAGGTEAQDWAQMLLRMYMRWAE 121 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 KR +K E L+ GEEAGIKSAT+ + G NAYG+LK E+GVHRLVRISP+D++ RRHTSF Sbjct: 122 KRGYKVELLDALAGEEAGIKSATITVAGRNAYGYLKAEKGVHRLVRISPFDASGRRHTSF 181 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +++ V P +DD+ EI I+ +D +IDT+R+ GAGGQHVN T+SAVRITH+PTG+VVQCQ E Sbjct: 182 AAVDVMPEIDDNTEIVINPADLKIDTFRSGGAGGQHVNKTESAVRITHLPTGIVVQCQSE 241 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQ +N+ QA +LRAKL+ELE QKRE+ + I WG QIRSYV PY +VKD Sbjct: 242 RSQIQNREQAMRLLRAKLFELERQKREQKKSELAGDYQAIEWGSQIRSYVFHPYNLVKDH 301 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLA 352 RTN E + V+DG++D F++A L Sbjct: 302 RTNAETGNVQAVMDGEIDLFIEAYLR 327 >gi|325266606|ref|ZP_08133283.1| peptide chain release factor RF2 [Kingella denitrificans ATCC 33394] gi|324982049|gb|EGC17684.1| peptide chain release factor RF2 [Kingella denitrificans ATCC 33394] Length = 367 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 165/351 (47%), Positives = 241/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+++ + D+ +RL + +EDP LW + A+ + +ER+ L+ + ++ I Sbjct: 16 LAQRNTDIRAYMDYQGKKERLEEVVGLSEDPELWNDPKRAQDIGKERKLLEGIVLTLENI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ + DN L+++ +EE+D ++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ENGIADNRELIDMVVEENDEDGFAAIVADVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA MLLRMY R+AE++ FK E +E DGE AGI +AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLLRMYLRYAERKGFKVEVVEQDDGEIAGINNATIRLEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S++VYP VDDS E+EI+ +D R DTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEVDDSFEVEINPADVRTDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVR+THIPTG+VVQ Q RSQH+N+ MLRAKL+ELE++KR E E Sbjct: 256 INKTDSAVRMTHIPTGIVVQSQNSRSQHENRRVCEEMLRAKLFELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365 >gi|33592241|ref|NP_879885.1| peptide chain release factor 2 [Bordetella pertussis Tohama I] gi|33601278|ref|NP_888838.1| peptide chain release factor 2 [Bordetella bronchiseptica RB50] gi|81578745|sp|Q7VZ35|RF2_BORPE RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|81580061|sp|Q7WK44|RF2_BORBR RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|33571886|emb|CAE41402.1| peptide chain release factor 2 [Bordetella pertussis Tohama I] gi|33575713|emb|CAE32791.1| peptide chain release factor 2 [Bordetella bronchiseptica RB50] Length = 367 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 170/350 (48%), Positives = 247/350 (70%), Gaps = 1/350 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + + L D+D +RL +N + EDP +W + A+ L RE++ L++ + + E+ Sbjct: 17 AEREQALRRYLDYDAKSERLQVVNAELEDPAIWNDPKHAQDLGREKKSLEDVVETLTELG 76 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D+ L+ELAL + D + L+ + R + ++E +F + + AD + ++++ A Sbjct: 77 SGLADSCELVELALADSDDATLEAIEHDADRFQEKLETLEFRRMFANPADPLNCFVDIQA 136 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+QDWA+MLLR Y ++AE++ FK E LE +G+ AG+KSAT+ I+G A+G+L+ Sbjct: 137 GAGGTEAQDWASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFGYLRT 196 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS+ RHTSF+S++VYP VD+S E+E++ +D RIDTYRASGAGGQH+ Sbjct: 197 ETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRIDTYRASGAGGQHI 256 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N TDSAVRITH P+G+VVQCQ +RSQH+N+A+A ML++KLYELE++ R E SK Sbjct: 257 NKTDSAVRITHAPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMTEQQKLEDSK 316 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 T++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 317 TDVGWGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQ 365 >gi|187927990|ref|YP_001898477.1| hypothetical protein Rpic_0895 [Ralstonia pickettii 12J] gi|238691788|sp|B2U8V1|RF2_RALPJ RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|187724880|gb|ACD26045.1| conserved hypothetical protein [Ralstonia pickettii 12J] Length = 367 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 172/351 (49%), Positives = 248/351 (70%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + L D+D +RL ++ + E+P +W + A+ L RE++ L+ + + ++ Sbjct: 16 LKSRADDLRRYLDYDVKSERLVEVDKELENPEVWNDPKRAQELGREKKSLETVVLALTKL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L L ELA EE D ++ + ++ VE +F + SG D+ + ++++ Sbjct: 76 DEDLTGAAELFELAREEGDDETIEAIEADTAGMRAIVEDMEFRRMFSGPMDAANCFIDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y ++ E++ FKTE LE +G+ AGIKSA++ ++G A+G+L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASIKVEGEYAFGFLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RHTSFSSI+VYP VDDSIEIE++ +D R+DTYRASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITHIPTG+VVQCQ +RSQH+N+A+A ML+++LYE EL+KR+ A+ E++ Sbjct: 256 INKTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAAADAQEAA 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 316 KTDVGWGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQ 365 >gi|282882039|ref|ZP_06290680.1| peptide chain release factor 2 [Peptoniphilus lacrimalis 315-B] gi|300814941|ref|ZP_07095169.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 836 str. F0141] gi|281298069|gb|EFA90524.1| peptide chain release factor 2 [Peptoniphilus lacrimalis 315-B] gi|300510911|gb|EFK38183.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 370 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 176/347 (50%), Positives = 234/347 (67%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 L+ L D + ++ LN K + + W + +A+ +++E ++ EI D Sbjct: 17 SSLDELALSLDVNGLRDKIKELNKKQMEQNFWDDNEKAQKIIKELNSYQRKVNPYDEISD 76 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 + D +L L EDD S E + I+ +V + E+LL+GE D NDA L +HAG Sbjct: 77 LIEDANDILLLMEMEDDYSSYDEFKKLILNIEKKVSEYKLETLLNGEFDENDAILSIHAG 136 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGGTE+QDWA+MLLRMY R+A + FK E L+I +EAGIKS TL I G +AYG+LKGE Sbjct: 137 AGGTEAQDWASMLLRMYVRYATNKGFKVETLDILKEDEAGIKSVTLKISGEHAYGFLKGE 196 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 +GVHRLVRISP+D+N RRHTSFSS+ V+P +D I+IEI + D +IDTYR+SGAGGQHVN Sbjct: 197 KGVHRLVRISPFDANKRRHTSFSSVDVFPDIDGDIDIEIKDEDLKIDTYRSSGAGGQHVN 256 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVRITHIPTG+VVQCQ ERSQ +N+ +A L+AKL L ++R+E + + + + Sbjct: 257 TTDSAVRITHIPTGIVVQCQNERSQIQNRERAMQTLKAKLLALAEEERKEKIDDLQGNYS 316 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +I WG QIRSYV QPY +VKD RTN E + V+DGDLD F+ A L Sbjct: 317 QIAWGSQIRSYVFQPYTLVKDHRTNCEVGDVNKVMDGDLDPFINAYL 363 >gi|15606882|ref|NP_214263.1| peptide chain release factor 2 [Aquifex aeolicus VF5] gi|6225943|sp|O67695|RF2_AQUAE RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|2984119|gb|AAC07656.1| peptide chain release factor RF-2 [Aquifex aeolicus VF5] Length = 373 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 164/353 (46%), Positives = 248/353 (70%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++L + + + L L+ K +P+ W++ +AK +++ R+ ++ ++ +K Sbjct: 12 ELRKRLEDVKKILSPEKLESELKELDQKMSEPNFWEDQEKAKQVIQRRKWVEETLNKLKN 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ + D L+E+ EED + ++ ++ + + ++ LSGE D+ +AYL + Sbjct: 72 LEKSVKDLEELVEITSEEDTETWAMMDE-EIKEVERTLRELELKTYLSGEMDAKNAYLTI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGGTE+ DWA+ML RMY RWAEK+ ++ E ++I + AGIKS T+L+KGP AYG+L Sbjct: 131 QAGAGGTEACDWADMLFRMYKRWAEKKGYEVELIDITPDDVAGIKSVTVLVKGPYAYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGEQGVHRLVRISP+D+N+RRHTSF+++ V P +D+ I+IEI D +I+T+RASGAGGQ Sbjct: 191 KGEQGVHRLVRISPFDANARRHTSFAAVSVMPQIDEDIKIEIKPEDLKIETFRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN TD+AVRITHIPTG+ V CQQERSQ++NK +A +L+AKLY+LE++K EE E Sbjct: 251 YVNKTDTAVRITHIPTGITVSCQQERSQYQNKRKALELLKAKLYQLEMKKLEEKKKQYEG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT+IGWG QIRSYV PY+++KDLRT E + V+DG++D+F+++ L K Sbjct: 311 EKTDIGWGHQIRSYVFHPYKLIKDLRTGYETGNVEAVMDGEIDEFIESYLKWK 363 >gi|329120730|ref|ZP_08249392.1| peptide chain release factor RF2 [Neisseria bacilliformis ATCC BAA-1200] gi|327460527|gb|EGF06863.1| peptide chain release factor RF2 [Neisseria bacilliformis ATCC BAA-1200] Length = 417 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 168/351 (47%), Positives = 237/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+ +RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 66 LEQRSAAIRSYMDYQGKKERLEEVIGLSEDPELWNDPKRAQEIGKERKLLEGVVLTLDNI 125 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+E+A+EE+D ++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 126 GGGIEDNRMLIEMAVEENDEDGFAAIESDVAELESQMAGLEFKRMFNQPADHNNCFVDIT 185 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA ML RMY+R+AE++ FK E +E DGE AGI ATL ++G AYG L+ Sbjct: 186 AGAGGTEAEDWAGMLFRMYSRYAERKGFKLEIIEEDDGEIAGINRATLRVEGEYAYGLLR 245 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S++VYP VDDS EIEI+ +D R DTYRASGAGGQH Sbjct: 246 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEVDDSFEIEINPADLRTDTYRASGAGGQH 305 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITHIPTG+VVQ Q RSQH+N+ MLR+KL+ELE++KR E E Sbjct: 306 INKTDSAVRITHIPTGIVVQSQSSRSQHENRRIVMEMLRSKLFELEMRKRNEEKQALEEG 365 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K ++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 366 KADVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 415 >gi|260427583|ref|ZP_05781562.1| peptide chain release factor 2 [Citreicella sp. SE45] gi|260422075|gb|EEX15326.1| peptide chain release factor 2 [Citreicella sp. SE45] Length = 397 Score = 273 bits (699), Expect = 2e-71, Method: Composition-based stats. Identities = 191/353 (54%), Positives = 242/353 (68%), Gaps = 2/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + L+ LG DW+ A RL N + EDP+LW + A+ LMR+RQ L +A+ Sbjct: 35 KIEKSLDLLGQRLDWETAPHRLEEFNARVEDPNLWDDPQAAQKLMRDRQMLVDAMETYSS 94 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L DN+ L+E+ E+D ++ E L+ + + K+ E+LL GEAD ND +LE+ Sbjct: 95 IKQELSDNVELIEMGEMEEDDEVVSEAEAALRALAEKAGQKELEALLDGEADGNDTFLEI 154 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTE+ DWA ML RMY RWAEKR + E G EAG KS I G NAYGWL Sbjct: 155 NAGAGGTEACDWAAMLQRMYVRWAEKRGYDVELQFEEAGAEAGTKSCGYKISGTNAYGWL 214 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+ +R TSF+S+WVYPVVDD+IEI+++ SD RIDTYR+SGAGGQ Sbjct: 215 KSESGVHRLVRISPFGKGTR-ETSFASVWVYPVVDDNIEIDVNPSDIRIDTYRSSGAGGQ 273 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPT +VV E+SQH+N+ A L+++LY++EL KR N Sbjct: 274 HVNTTDSAVRITHIPTNIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDKRNAEINAQHE 332 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +K + GWG QIRSYVLQPYQMVKDLRT+ E + VLDGDLD FM ATLA + Sbjct: 333 AKGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTQGVLDGDLDPFMAATLAQQ 385 >gi|313895325|ref|ZP_07828882.1| peptide chain release factor 2 [Selenomonas sp. oral taxon 137 str. F0430] gi|312976220|gb|EFR41678.1| peptide chain release factor 2 [Selenomonas sp. oral taxon 137 str. F0430] Length = 368 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 174/352 (49%), Positives = 234/352 (66%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L+ + + ++++ L K +P W + A+ + +E L + K + Sbjct: 12 LGEKLDQMRISLEIPAKEEKIAELEYKMSEPTFWDDAAAAQKVNQELAGLKGGVDTYKAL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L E+ +EE+D S+ ++ L I +E Q E LLSGE D+N+A L +H Sbjct: 72 AAKYEDAETLYEMGIEENDPSMERDIRAELDLIAEGLETLQLEVLLSGEYDANNAILTLH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDW MLLRMY RWAE+ F E ++ G+EAG+KSA+L IKG NAYG+LK Sbjct: 132 AGAGGTEAQDWTQMLLRMYGRWAERHGFTVETADLQPGDEAGVKSASLFIKGHNAYGFLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS +RRHTSFS+ V P +DD++E++I D R+D YRASGAGGQH Sbjct: 192 SEKGVHRLVRISPFDSQARRHTSFSACDVMPEIDDAVEVDIDMDDVRVDYYRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T SAVR+TH PTG+VVQCQ ERSQ +NK Q MLRAKL+ELE +K+EE E Sbjct: 252 INKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCLKMLRAKLFELEQEKKEEELAKLEGV 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +I WG QIRSYV QPY MVKD+RTN E + V+DG++D F++A L K Sbjct: 312 QQKIEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGEIDPFIRAYLNAK 363 >gi|126652452|ref|ZP_01724624.1| peptide chain release factor 2 [Bacillus sp. B14905] gi|126590723|gb|EAZ84838.1| peptide chain release factor 2 [Bacillus sp. B14905] Length = 328 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 170/326 (52%), Positives = 224/326 (68%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +P W + A++++ E L ++ KE+++ + + LEL EE D + +E Sbjct: 1 MMLEPGFWDDQQGAQVIINEGNGLKAIVNEYKELEEIHENLDMTLELLREEPDEELQEEL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 L + ++ + + LLSG D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR Sbjct: 61 GKELVEFQQKMADFELQLLLSGPYDQNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E ++ G+EAGIKS T+ IKG NA+G+L+ E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 GFKVETMDYLPGDEAGIKSVTISIKGHNAFGYLQAEKGVHRLVRISPFDSSGRRHTSFVS 180 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P D++IEI+I D +IDTYRA+GAGGQH+NTTDSAVRITHIPTG VVQCQ ERS Sbjct: 181 CDVMPEFDENIEIDIRTEDLKIDTYRATGAGGQHINTTDSAVRITHIPTGTVVQCQAERS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q KN+ +A ML+ KLY+LEL+K++ + + +IGWG QIRSYV PY MVKD RT Sbjct: 241 QIKNREKAMAMLKGKLYQLELEKQQAQLDEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354 N E + V+DGD+D F+ A L + Sbjct: 301 NEETGNVGAVMDGDVDPFINAYLRSR 326 >gi|50086456|ref|YP_047966.1| peptide chain release factor 2 [Acinetobacter sp. ADP1] gi|49532432|emb|CAG70144.1| peptide chain release factor 2 [Acinetobacter sp. ADP1] Length = 337 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 174/335 (51%), Positives = 235/335 (70%), Gaps = 1/335 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 +RL + + EDP +W + A+ + +E+ L+N ++ + + ++L D +L+LA+E Sbjct: 2 KKERLEEVLRELEDPAIWNDQSRAQAMAKEKGELENVLNVLDNLAEQLEDAKAMLDLAVE 61 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 DD S+L + L + E+ +F + S D N Y+E+ AG+GGTE+QDWA+MLL Sbjct: 62 ADDESLLVDVESELATAEDELAKLEFRRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLL 121 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RW E+ FK E +E DG+ AGIKSAT+ ++G AYGWL+ E GVHRLVR SP+DS Sbjct: 122 RMYMRWIERHGFKAELMEESDGDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDS 181 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 +RRHTSFS+++V P +DD+IEIEI+ +D R DTYRASGAGGQH+N TDSAVR+TH PTG Sbjct: 182 GNRRHTSFSAVFVSPEIDDNIEIEINPADVRTDTYRASGAGGQHINKTDSAVRLTHAPTG 241 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV CQ +RSQH N+ AW LRAKLYELE+ KR E A E SK++IGWG QIRSYVL Sbjct: 242 IVVACQNQRSQHANRDHAWKQLRAKLYELEMSKRNEAAQALEDSKSDIGWGSQIRSYVLD 301 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +KDLRT +E ++ VLDGDLD F++A+L Sbjct: 302 D-SRIKDLRTGVENSNTGAVLDGDLDKFIEASLKQ 335 >gi|299535985|ref|ZP_07049304.1| peptide chain release factor 2 [Lysinibacillus fusiformis ZC1] gi|298728590|gb|EFI69146.1| peptide chain release factor 2 [Lysinibacillus fusiformis ZC1] Length = 328 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 173/326 (53%), Positives = 222/326 (68%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +P W + A++++ E L ++ K++ + + + LEL EE D + +E Sbjct: 1 MMLEPGFWDDQQGAQVIINEGNGLKAIVNEYKDLVETHENLDMTLELLREEPDEELQEEL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 L + ++ + + LLSG D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR Sbjct: 61 GKELAEFQQKMADFELQLLLSGPYDQNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E ++ G+EAGIKS TL IKG NA+G+L+ E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLSIKGHNAFGYLQAEKGVHRLVRISPFDSSGRRHTSFVS 180 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P DD+IEI+I D +IDTYRA+GAGGQH+NTTDSAVRITHIPTG +VQCQ ERS Sbjct: 181 CDVMPEFDDNIEIDIRTEDLKIDTYRATGAGGQHINTTDSAVRITHIPTGTIVQCQAERS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q KN+ +A ML+ KLY+LEL K++ + + EIGWG QIRSYV PY MVKD RT Sbjct: 241 QIKNREKAMTMLKGKLYQLELDKQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354 N E + V+DGDLD F+ A L K Sbjct: 301 NEETGNVGAVMDGDLDPFINAYLRSK 326 >gi|238926688|ref|ZP_04658448.1| peptide chain release factor RF2 [Selenomonas flueggei ATCC 43531] gi|238885445|gb|EEQ49083.1| peptide chain release factor RF2 [Selenomonas flueggei ATCC 43531] Length = 368 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 175/352 (49%), Positives = 232/352 (65%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L+ + + ++++ L K +P W + A+ L +E L + K + Sbjct: 12 LGEKLDQMRISLEIPAKEEKIAELEYKMGEPSFWDDAAAAQKLNQELADLKGGVDTYKGL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L E+ +EE D S+ + L I +E Q E LLSG+ D+N+A L +H Sbjct: 72 MAKYEDAETLYEMGIEEGDASMEDDIRAELDLITEGLETLQLEVLLSGDYDANNAILTLH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDW MLLRMY RWAE+ F E ++ G+EAG+KSATL IKG NAYG+LK Sbjct: 132 AGAGGTEAQDWTQMLLRMYGRWAERHGFAVETADLQPGDEAGVKSATLFIKGHNAYGFLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS +RRHTSFS+ V P +DD++E+ I+ D R+D YRASGAGGQH Sbjct: 192 SEKGVHRLVRISPFDSQARRHTSFSACDVMPEIDDAVEVPINMDDVRVDYYRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T SAVR+TH PTG+VVQCQ ERSQ +NK Q MLRAKL+ELE +K+EE E Sbjct: 252 INKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCMKMLRAKLFELEQEKKEEEIAKLEGV 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +I WG QIRSYV QPY MVKD+RTN E + V+DG++D F++A L K Sbjct: 312 QQKIEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGEIDPFIRAYLNAK 363 >gi|241662572|ref|YP_002980932.1| hypothetical protein Rpic12D_0960 [Ralstonia pickettii 12D] gi|240864599|gb|ACS62260.1| conserved hypothetical protein [Ralstonia pickettii 12D] Length = 367 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 173/351 (49%), Positives = 248/351 (70%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + L D+D +RL ++ + E+P +W + A+ L RE++ L+ + + ++ Sbjct: 16 LKSRADDLRRYLDYDVKSERLVEVDKELENPEVWNDPKRAQELGREKKSLETVVLALTKL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L L ELA EE D ++ + ++ VE +F + SG D+ + ++++ Sbjct: 76 DEDLTGAAELFELAREEGDDETIEAIEADTAGMRAIVEDMEFRRMFSGPMDAANCFIDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLR Y ++ E++ FKTE LE +G+ AGIKSA++ ++G A+G+L+ Sbjct: 136 AGAGGTEACDWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASIKVEGEYAFGFLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS RHTSFSSI+VYP VDDSIEIEI+ +D R+DTYRASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEINPADLRVDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITHIPTG+VVQCQ +RSQH+N+A+A ML+++LYE EL+KR+ A+ E++ Sbjct: 256 INKTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAAADAQEAA 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 316 KTDVGWGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQ 365 >gi|304437837|ref|ZP_07397786.1| peptide chain release factor RF2 [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369194|gb|EFM22870.1| peptide chain release factor RF2 [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 368 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 177/352 (50%), Positives = 232/352 (65%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L+ + + ++++ L K +P W + A+ L +E L + K + Sbjct: 12 LGEKLDQMRISLEIPAKEEKIAELEYKMGEPSFWDDAAAAQKLNQELAALKGGVDTYKGL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L E+ +EE D S+ + L I +E Q E LLSG+ D+NDA L +H Sbjct: 72 MAKYEDAETLYEMGIEEGDASMEDDIRAELDLIAEGLETLQLEVLLSGDYDANDAILTLH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDW MLLRMY RWAE+ F E ++ G+EAG+KSATL IKG NAYG+LK Sbjct: 132 AGAGGTEAQDWTQMLLRMYGRWAERHGFTVETADLQPGDEAGVKSATLFIKGHNAYGFLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS +RRHTSFS+ V P +DD++E+ I+ D R+D YRASGAGGQH Sbjct: 192 SEKGVHRLVRISPFDSQARRHTSFSACDVMPEIDDAVEVPINMDDVRVDYYRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T SAVR+TH PTG+VVQCQ ERSQ +NK Q MLRAKL+ELE +K+EE E Sbjct: 252 INKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCMKMLRAKLFELEQEKKEEEIAKLEGV 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +I WG QIRSYV QPY MVKD+RTN E + V+DG+LD F++A L K Sbjct: 312 QQKIEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGELDPFIRAYLNAK 363 >gi|296330264|ref|ZP_06872745.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676131|ref|YP_003867803.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii str. W23] gi|296152532|gb|EFG93400.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414375|gb|ADM39494.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii str. W23] Length = 327 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 168/325 (51%), Positives = 218/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ ++ E + + ++ K++ D + + +L EE D + E Sbjct: 1 MADPEFWNDQQKAQTVINEANGIKDYVNSYKKLNDSHEELQMTHDLLKEEPDSDLQLELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L+ + E + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRW E+R Sbjct: 61 KELKSLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGERRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D I+I+I D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ Sbjct: 181 EVMPEFNDEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A ML+AKLY+ +++++ + + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 IKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGD+D F+ A L K Sbjct: 301 TEMGNVQAVMDGDIDTFIDAYLRSK 325 >gi|168333703|ref|ZP_02691956.1| peptide chain release factor 2 [Epulopiscium sp. 'N.t. morphotype B'] Length = 349 Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats. Identities = 174/345 (50%), Positives = 230/345 (66%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 G LFD + ++++ L T + P WQN A+ +++E + IS K++ + D L Sbjct: 4 GDLFDVTHVQEQITELETISATPDFWQNSKYAQSVLQEXKDYKEIISKYKKLCNMYEDVL 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +L+++ +EE D + E + + + +LL GE D NDA + +HAGAGGTE+ Sbjct: 64 VLIDMGIEEHDADMCAEAISDANSFIEFYDNLRTSTLLDGEYDKNDAIISLHAGAGGTEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DW NMLLRMYTRWAEK FK++ L+I DGEEAG+KSATL I G NAYG+LK E+G+HRL Sbjct: 124 CDWNNMLLRMYTRWAEKHGFKSKLLDILDGEEAGVKSATLEISGQNAYGYLKSEKGIHRL 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+DS RRHTSF+S+ V P +DD+ EI I+ D +IDTYR+SGAGGQHVNTTDSAV Sbjct: 184 VRISPFDSGGRRHTSFASLDVMPKIDDTAEITINPEDLQIDTYRSSGAGGQHVNTTDSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH P+G+VVQCQ ERSQ +N+ ML +KL + Q++ + K +I WG Sbjct: 244 RITHKPSGIVVQCQNERSQIQNRETCMKMLASKLLYKQHQEQLLKIDEIRGEKKDIAWGS 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 QIRSYV PY MVKD RTN E + V+DGD+D F+ A LA K Sbjct: 304 QIRSYVFHPYNMVKDHRTNQETGNTGAVMDGDIDAFVNAYLAWLK 348 >gi|327441322|dbj|BAK17687.1| protein chain release factor B [Solibacillus silvestris StLB046] Length = 328 Score = 273 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 171/325 (52%), Positives = 220/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + A+ ++ E + ++ KE+ D + + LEL EE D + +E Sbjct: 1 MLEPEFWNDQNGAQAIINESNGIKAVVNEYKELVDTQENLEMTLELLREEPDEELQEEIG 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L + ++E + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR Sbjct: 61 KELAEFQTKMEEFELQMLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK ++ G+EAGIKS TL I G NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVTTIDYLPGDEAGIKSVTLQISGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D IEI+I D ++DTYRA+GAGGQH+NTTDSAVRITH+PTGVVVQCQ ERSQ Sbjct: 181 DVMPEFNDEIEIDIRTEDLKVDTYRATGAGGQHINTTDSAVRITHLPTGVVVQCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML++KLY+LE++K++ + + EIGWG QIRSYV PY MVKD RT+ Sbjct: 241 IKNRDAAMKMLKSKLYQLEIEKQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTS 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L K Sbjct: 301 AETGNVGAVMDGDLDIFITAYLRSK 325 >gi|260892371|ref|YP_003238468.1| PE-PGRS family protein [Ammonifex degensii KC4] gi|260864512|gb|ACX51618.1| PE-PGRS family protein [Ammonifex degensii KC4] Length = 377 Score = 273 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 165/352 (46%), Positives = 236/352 (67%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ +L L D +RL+ L + E P W+++ A+ + +E L + + Sbjct: 12 LAERLKYLEDSLDLAQKEKRLALLEKEMEAPDFWRDLARAQAVTQEVASLRQCLGRFYRL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ + +LLELA EE D +L E + +++++ E+E + E LLSG D+++A + +H Sbjct: 72 REGHEELSVLLELAAEEGDAQVLAELAQDVKKLAGEIEDLEVELLLSGPYDASNAIVSLH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGT++QDW MLLRMY RWAE ++ L++ GEEAGIKS T + GP AYG+LK Sbjct: 132 AGAGGTDAQDWVAMLLRMYARWAEAHGYRIRTLDLLTGEEAGIKSVTFEVIGPRAYGYLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRL+RISP+D++ RRHTSF+S+ V P V D EI+I+ + RIDT+RASGAGGQH Sbjct: 192 AERGVHRLIRISPFDASGRRHTSFASVDVLPAVKDDTEIKIAPEELRIDTFRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T++AVRITH+PTG+ V CQ ERSQ NKA A +LRA+L +L++++RE+ Sbjct: 252 VNKTETAVRITHLPTGITVTCQSERSQSANKAAAMEILRARLLDLKIKEREKELAALRGE 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 EI WG QIR+YVL PY +VKD RT +E+ VLDGD+DDF++A L ++ Sbjct: 312 VKEIAWGNQIRTYVLHPYTLVKDHRTGVERRDIQAVLDGDIDDFIRAYLKVE 363 >gi|241895046|ref|ZP_04782342.1| peptide chain release factor 2 [Weissella paramesenteroides ATCC 33313] gi|241871764|gb|EER75515.1| peptide chain release factor 2 [Weissella paramesenteroides ATCC 33313] Length = 396 Score = 273 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 159/352 (45%), Positives = 223/352 (63%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +S ++ G D D ++ K +P WQ+ + A+ ++ E L ++ Sbjct: 38 MSAEIEKFGDSLDLDALNDEIAANEAKMVEPDFWQDNVAAQKIIDENNVLKGRRDDYLKL 97 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + ++L E D + E +D+L ++ ++ + LL+ D N+A LE+H Sbjct: 98 ANGVENVEAAIDLLSELYDEDMATEMADDLDKLSEDLSAYRLAQLLNEPYDKNNAILEIH 157 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 G+GGTES DW L RMYTRWAE+ FK + ++ H G+ AG+ S TL+I G NAYG+L+ Sbjct: 158 PGSGGTESADWGANLQRMYTRWAEQHGFKVDIMDYHPGDVAGVDSVTLMITGHNAYGYLR 217 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHR VRISP+DS RRHTSF SI V P +DDS+E++I+ +D ++D YRASGAGGQH Sbjct: 218 SERGVHRFVRISPFDSAGRRHTSFVSIDVMPELDDSVEVDINPADVKMDVYRASGAGGQH 277 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T SAVR+THIPTG+VV QQ+RSQ +NK A+ MLRAKLY+LE+ K+E+ Sbjct: 278 INKTSSAVRLTHIPTGIVVASQQQRSQFQNKDTAYAMLRAKLYQLEMDKKEKERAAIAGD 337 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 E GWG QIRSYV QPY+MVKD R E +P V+DGDLD F+ A L + Sbjct: 338 HLENGWGSQIRSYVFQPYRMVKDHRDGFESGNPQAVMDGDLDPFINAYLRWR 389 >gi|323703031|ref|ZP_08114687.1| peptide chain release factor 2 [Desulfotomaculum nigrificans DSM 574] gi|323532044|gb|EGB21927.1| peptide chain release factor 2 [Desulfotomaculum nigrificans DSM 574] Length = 326 Score = 273 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 160/326 (49%), Positives = 215/326 (65%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 W N ++ + ++ L + + ++ D ++LEL EE+D + E Sbjct: 1 MTQEGFWDNTEHSQQVTQKLALLKDKVEAFNSLESAYQDLEVMLELCNEEEDPLLDDELK 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +L + V + E +LSG D NDA L +HAGAGGTESQDW MLLRM+TR+ E Sbjct: 61 SDLASLTKRVADMELEVMLSGPYDRNDAILSLHAGAGGTESQDWVQMLLRMFTRYCENHN 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K E L++ G+EAG+KSAT+ + GPNAYG+LK E+GVHRLVRISP+D+ RRHTSF+S+ Sbjct: 121 YKVEVLDLLPGDEAGVKSATIQVSGPNAYGYLKSEKGVHRLVRISPFDAAGRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V PVVDD +E+ I D +IDTYR+ GAGGQHVN TDSAVRITH+PTG+VV CQ ERSQ Sbjct: 181 DVLPVVDDEVEVNIRPEDLKIDTYRSGGAGGQHVNKTDSAVRITHLPTGIVVACQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 N+A A +L+AKL +LEL+K+EE + +I WG QIRSYV PY +VKD RT Sbjct: 241 TYNRAAAMKLLKAKLIDLELRKKEEELAALRGDQKDIAWGSQIRSYVFHPYSLVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355 +E + V+DG +D+F+ A L K+ Sbjct: 301 VEVGNVYAVMDGAIDEFIAAYLKQKR 326 >gi|56551094|ref|YP_161933.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis ZM4] gi|241761334|ref|ZP_04759422.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260753249|ref|YP_003226142.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|56542668|gb|AAV88822.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis ZM4] gi|241374241|gb|EER63738.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258552612|gb|ACV75558.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 375 Score = 273 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 206/352 (58%), Positives = 266/352 (75%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + L L DWD A++RL LN + EDP LW + A+ +MRER LD +I+ + I Sbjct: 12 IQESLALLRRFLDWDRALRRLDELNARVEDPSLWDDARAAQEVMRERGRLDESIAATRAI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L +N+ L+E+A E + ++Q+ L+ + + + ++LLSGEAD ND Y+EV+ Sbjct: 72 ATELQENIELIEMAEAEGEEEMVQDAISALESLAERADRDKVKALLSGEADGNDTYIEVN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTESQDWA ML RMY RWAE++ FK E ++ H GE+AGIKSATLL+KG +AYG+ K Sbjct: 132 AGAGGTESQDWAEMLSRMYQRWAERQGFKVELVDYHAGEQAGIKSATLLVKGESAYGYAK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DSN+RRHTSF+S+ VYPVVDD I+IE+ + D +IDTYR+SGAGGQH Sbjct: 192 TENGVHRLVRISPFDSNARRHTSFASVAVYPVVDDDIDIEVLDKDLKIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV CQ +RSQHKN+A+A L+A+LYE ELQ RE A+ G ++ Sbjct: 252 VNTTDSAVRITHMPTGIVVACQNQRSQHKNRAEAMKQLKARLYERELQIREAEASAGYAA 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVLQPYQ+VKDLRT I T+P+DVLDG+LD F+ A LA + Sbjct: 312 KSEIGWGHQIRSYVLQPYQLVKDLRTGITSTAPADVLDGNLDAFIAAALAQR 363 >gi|52082063|ref|YP_080854.1| peptide chain release factor 2 [Bacillus licheniformis ATCC 14580] gi|52787452|ref|YP_093281.1| hypothetical protein BLi03772 [Bacillus licheniformis ATCC 14580] gi|319647929|ref|ZP_08002147.1| peptide chain release factor 2 [Bacillus sp. BT1B_CT2] gi|52005274|gb|AAU25216.1| peptide chain release factor 2 [Bacillus licheniformis ATCC 14580] gi|52349954|gb|AAU42588.1| PrfB [Bacillus licheniformis ATCC 14580] gi|317390270|gb|EFV71079.1| peptide chain release factor 2 [Bacillus sp. BT1B_CT2] Length = 327 Score = 273 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 165/325 (50%), Positives = 220/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ ++ E L + ++ K + + + + +L E+ D + E Sbjct: 1 MADPDFWGDQQKAQTIINEANALKDYVNTYKSLSESHEELQMTHDLLKEDPDQDLQNELV 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L+ + + + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+R Sbjct: 61 NELKSLTKQFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P ++ I+IEI D ++DTYRASGAGGQHVNTTDSAVRITH+PTGV+V CQ ERSQ Sbjct: 181 DVMPEFNEEIDIEIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTGVIVTCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A ML++KLY+ +++++ + + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNRERAMKMLKSKLYQRRIEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGD+D F+ A L K Sbjct: 301 TEMGNVQAVMDGDIDSFIDAYLRSK 325 >gi|302390246|ref|YP_003826067.1| bacterial peptide chain release factor 2 (bRF-2) [Thermosediminibacter oceani DSM 16646] gi|302200874|gb|ADL08444.1| bacterial peptide chain release factor 2 (bRF-2) [Thermosediminibacter oceani DSM 16646] Length = 365 Score = 273 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 163/346 (47%), Positives = 229/346 (66%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + + + D ++ L KT P+ W + A+ +++ L + + I+ + Sbjct: 16 IQEMRDALEIDRLKSEIAQLEEKTLTPNFWDDAQAAQKILQTLNQLKETVEKFEAIKKKW 75 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D + L+EL +E+ D + E S + K E E + ++LL G D N+A L +HAGAG Sbjct: 76 EDLMTLIELGIEDHDEGLYGEISAEAEEFKKEFEEMRLKTLLRGRYDKNNAILSLHAGAG 135 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW MLLRMYTRWAE + +K + L++ GEEAGIKSAT+L++GP AYG+LK EQG Sbjct: 136 GTEAQDWVQMLLRMYTRWAEDKGYKVKVLDMLPGEEAGIKSATILVEGPYAYGYLKSEQG 195 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+D+ RRHTSF+S+ V P ++D IE+EI D +I+T+R+ GAGGQ+VN T Sbjct: 196 VHRLVRISPFDAAGRRHTSFASVDVIPEIEDDIEVEIKPEDLKIETFRSGGAGGQYVNKT 255 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITHIPTG+VV CQ ERSQ N+ A +LRAKL+ L L+++++ N + EI Sbjct: 256 ESAVRITHIPTGIVVTCQNERSQQSNRNTAMKLLRAKLFNLYLEEQQKKINELRGEQKEI 315 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYV PY +VKD RTN+E + V+DG++D F+ A L Sbjct: 316 AWGNQIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDMFINAYLK 361 >gi|253997054|ref|YP_003049118.1| hypothetical protein Mmol_1687 [Methylotenera mobilis JLW8] gi|253983733|gb|ACT48591.1| hypothetical protein Mmol_1687 [Methylotenera mobilis JLW8] Length = 367 Score = 273 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 173/351 (49%), Positives = 240/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + L G D+++ QRL +N EDP +W + +++ L +E++ L+ ++ + + Sbjct: 16 LSERNHALRGYLDFESKSQRLEEVNGLLEDPKIWDDNAKSQALGKEKRTLELVVNTLIHV 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 Q L D L E+A EE+D L + ++ E+ +F + SGE DS + ++E Sbjct: 76 QGGLKDAQELFEMAREENDDDTLLSVEHDSLALEKEIAEMEFRRMFSGELDSANCFIEFQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +G+GGTE+QDWANMLLRMY R+ E++ FK E LE +G+ AGIK A++ + G AYG L+ Sbjct: 136 SGSGGTEAQDWANMLLRMYLRYCERKGFKVEVLEESEGDVAGIKGASIKVSGDYAYGTLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S+ ++P VDDSIEI+I+ +D R+DTYRASGAGGQH Sbjct: 196 TENGVHRLVRKSPFDSNAKRHTSFASVQIFPEVDDSIEIDINPADLRVDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITHIPT VVQCQ +RSQH+N+ +A NML+ LY LEL KR + E + Sbjct: 256 INKTDSAVRITHIPTNTVVQCQNDRSQHRNREEAMNMLKGALYNLELNKRNQEKQALEDA 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KT+IGWG QIRSYVL +KDLRT +E + VLDGDLD F+ +L Sbjct: 316 KTDIGWGHQIRSYVLD-QSRIKDLRTGVEIGNTQGVLDGDLDPFITESLKQ 365 >gi|289450201|ref|YP_003475113.1| peptide chain release factor 2 [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184748|gb|ADC91173.1| peptide chain release factor 2 [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 369 Score = 273 bits (697), Expect = 4e-71, Method: Composition-based stats. Identities = 162/353 (45%), Positives = 227/353 (64%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++ L LG + + R+S L +T++P W + +A+ + + L + + + Sbjct: 14 MTEPLKDLGKALYIEPTLDRISELEARTQEPDFWNDQTKAQEVQTKLAGLQRKVDTYRHL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 Q D L++L EE+D +++ E K + ++LL GE D N+ L +H Sbjct: 74 QKEFDDIDTLIDLGQEENDGAVVAEVQTQFNAFKELFNKLRLQTLLVGEYDRNNVILNIH 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDW ML RMYTRWAE ++ + L+I DG+EAG+KS + I G NAYG+++ Sbjct: 134 AGAGGTEAQDWTEMLYRMYTRWAEDHDYQLKVLDILDGDEAGLKSVSFEIIGENAYGYMR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D++ RRHTSF+S+ V P +D+SI+I I+ D RID YR+SGAGGQH Sbjct: 194 SEMGVHRLVRISPFDASGRRHTSFASVEVLPELDNSIQININPDDLRIDRYRSSGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SA+RITHIPTGVVV CQ ERSQ +N+ A NML++KL+ L + + + + + Sbjct: 254 VNKTESAIRITHIPTGVVVSCQTERSQIQNRETAMNMLKSKLFALAKAAQMDKVDDLKGN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + +I WG QIRSYV PY MVKD RTN E T V+DGDLD F+ A L+ K Sbjct: 314 QMDIAWGSQIRSYVFCPYTMVKDHRTNYEVTGVDKVMDGDLDGFINAYLSQGK 366 >gi|163789840|ref|ZP_02184276.1| peptide chain release factor 2, programmed frameshift [Carnobacterium sp. AT7] gi|159874780|gb|EDP68848.1| peptide chain release factor 2, programmed frameshift [Carnobacterium sp. AT7] Length = 353 Score = 273 bits (697), Expect = 4e-71, Method: Composition-based stats. Identities = 178/345 (51%), Positives = 240/345 (69%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 LGGLFD +N + ++ N + +P W++ +A+ ++ E L + ++ D Sbjct: 3 LGGLFDLENLERDIAEYNDRMTEPTFWEDAQKAQTVINEANELKEKYNQYNDLVTEKEDL 62 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 +LLE+ EE+D + +E + + +++ + + LLS D N+A +E+H GAGGTE Sbjct: 63 ELLLEMVKEENDEELAKELNSKISPFLDKLDQYELDLLLSDPYDKNNAIIELHPGAGGTE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 SQDW ++LLRMYTRWAEKR FK E L G+EAGIKS TLLIKG NAYG+LK E+GVHR Sbjct: 123 SQDWGSLLLRMYTRWAEKRGFKIETLNYQSGDEAGIKSVTLLIKGMNAYGYLKAEKGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+DS RRHTSF SI V P +DDS++I+I+ D +IDTYRA+GAGGQH+NTTDSA Sbjct: 183 LVRISPFDSAGRRHTSFVSIDVVPELDDSVDIKINSDDLKIDTYRATGAGGQHINTTDSA 242 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIP+GVVV Q +RSQ KN+ QA +ML+AKLY+LE++++E+ + EIGWG Sbjct: 243 VRITHIPSGVVVASQAQRSQLKNRDQAMSMLKAKLYQLEVEEQEKEMAAIRGEQLEIGWG 302 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QIRSYV PY MVKD RTN E + + V+DG +D F++A L K Sbjct: 303 SQIRSYVFHPYSMVKDHRTNYETGNIAQVMDGGIDPFIQAYLRSK 347 >gi|256006007|ref|ZP_05430946.1| peptide chain release factor 2 [Clostridium thermocellum DSM 2360] gi|281417086|ref|ZP_06248106.1| peptide chain release factor 2 [Clostridium thermocellum JW20] gi|255990030|gb|EEU00173.1| peptide chain release factor 2 [Clostridium thermocellum DSM 2360] gi|281408488|gb|EFB38746.1| peptide chain release factor 2 [Clostridium thermocellum JW20] Length = 357 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 167/342 (48%), Positives = 232/342 (67%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 G LFD + ++ L K +P W + ++ ++++ + L + + ++ + D + Sbjct: 4 GNLFDIASIGNQIEELEQKASEPDFWNDTENSQKILQKIKSLRSKVERYNKLVSQWEDLI 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L EL +EE D S++ E + + K E E + E+LL+G+ D N+A L +HAGAGGTE+ Sbjct: 64 TLCELGIEEQDESVIPEAVEGFKAFKKEFEALRLETLLTGQYDKNNAILTLHAGAGGTEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDW ML RMYTRWAEK+ F + L+ DGEEAGIKS T + G NAYG+LK E+GVHRL Sbjct: 124 QDWVQMLFRMYTRWAEKKGFTVKVLDYLDGEEAGIKSVTFQVIGENAYGFLKSEKGVHRL 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+D++ RRHTSF+S+ V P ++D IE+ I+ D RIDTYR+SGAGGQH+N T+SAV Sbjct: 184 VRISPFDASGRRHTSFASLDVMPELNDDIEVHINPDDLRIDTYRSSGAGGQHINKTESAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIPTG+VV CQ ERSQ +NK A ML+AKL EL+ ++ +E + + EI WG Sbjct: 244 RITHIPTGIVVSCQSERSQFQNKDTAMKMLKAKLMELKERENKEKIEDLKGIQLEIAWGS 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYV PY +VKD RTN E+ + V+DG+LD F+ + L+ Sbjct: 304 QIRSYVFCPYTLVKDHRTNYEEINVDAVMDGELDGFINSYLS 345 >gi|125972886|ref|YP_001036796.1| peptide chain release factor 2 [Clostridium thermocellum ATCC 27405] gi|125713111|gb|ABN51603.1| bacterial peptide chain release factor 2 (bRF-2) [Clostridium thermocellum ATCC 27405] Length = 357 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 167/342 (48%), Positives = 232/342 (67%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 G LFD + ++ L K +P W + ++ ++++ + L + + ++ + D + Sbjct: 4 GNLFDIASIGNQIEELEQKASEPDFWNDTENSQKILQKIKSLRSKVERYNKLVSQWEDLI 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L EL +EE D S++ E + + K E E + E+LL+G+ D N+A L +HAGAGGTE+ Sbjct: 64 TLCELGIEEQDESVIPEAVEGFKAFKKEFEALRLETLLTGQYDKNNALLTLHAGAGGTEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDW ML RMYTRWAEK+ F + L+ DGEEAGIKS T + G NAYG+LK E+GVHRL Sbjct: 124 QDWVQMLFRMYTRWAEKKGFTVKVLDYLDGEEAGIKSVTFQVIGENAYGFLKSEKGVHRL 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+D++ RRHTSF+S+ V P ++D IE+ I+ D RIDTYR+SGAGGQH+N T+SAV Sbjct: 184 VRISPFDASGRRHTSFASLDVMPELNDDIEVHINPDDLRIDTYRSSGAGGQHINKTESAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIPTG+VV CQ ERSQ +NK A ML+AKL EL+ ++ +E + + EI WG Sbjct: 244 RITHIPTGIVVSCQSERSQFQNKDTAMKMLKAKLMELKERENKEKIEDLKGIQLEIAWGS 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYV PY +VKD RTN E+ + V+DG+LD F+ + L+ Sbjct: 304 QIRSYVFCPYTLVKDHRTNYEEINVDAVMDGELDGFINSYLS 345 >gi|238020780|ref|ZP_04601206.1| hypothetical protein GCWU000324_00670 [Kingella oralis ATCC 51147] gi|237867760|gb|EEP68766.1| hypothetical protein GCWU000324_00670 [Kingella oralis ATCC 51147] Length = 367 Score = 272 bits (696), Expect = 4e-71, Method: Composition-based stats. Identities = 170/351 (48%), Positives = 242/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS++ + + D+ +RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LSQRNSDIRVYMDYQGKKERLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ + DN L+++ +EE+D ++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 ENGIADNRELIDMVVEENDADGFAAIVADVAALEQQMADLEFKRMFNQPADPNNCFVDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA MLLRMYTR+AE++ FK E +E DGE AGI +ATL I+G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLLRMYTRYAERKGFKVEVIEQDDGEIAGINNATLRIEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S++VYP VDDS EIEI+ +D R DTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEVDDSFEIEINPADLRTDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITH+PTG+VVQ Q RSQH+N+ MLRAKL+ELE++KR E E Sbjct: 256 INKTDSAVRITHLPTGIVVQSQSSRSQHENRRIVMEMLRAKLFELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K+++GWG QIRSYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365 >gi|225027512|ref|ZP_03716704.1| hypothetical protein EUBHAL_01768 [Eubacterium hallii DSM 3353] gi|224955151|gb|EEG36360.1| hypothetical protein EUBHAL_01768 [Eubacterium hallii DSM 3353] Length = 371 Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats. Identities = 165/352 (46%), Positives = 235/352 (66%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + LG + +++ L ++ + W + +A+ + R+ ++L + +S Sbjct: 13 QYKEPMKELGVSLALSHKHEQIKELESEMREEGFWNDPDKAQEVTRKVKNLKDTVSAYHA 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D ++EL EE+D S++ + + L ++E + + ++LLSGE D N+A + + Sbjct: 73 LELTLDDVSTMIELGNEENDASVIPDIEELLGEFEIEFDNLKIQTLLSGEYDKNNAIVTL 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTES DWA ML RMY++WA+ FKTE L+ DG+EAGIKS T + G NAYG+L Sbjct: 133 HAGAGGTESCDWAGMLYRMYSKWADSHGFKTEVLDYLDGDEAGIKSITFEVNGENAYGYL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+++ +R TSF+S V P +++ + +EI++ D RIDTYRASGAGGQ Sbjct: 193 KSERGVHRLVRISPFNAAGKRQTSFASCDVMPDIEEDLSVEIADEDIRIDTYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+N TDSA+RITHIPTGVVVQCQ ERSQHKNK +A ML+AKLY ++ Q+ E + Sbjct: 253 HINKTDSAIRITHIPTGVVVQCQNERSQHKNKDKAMQMLKAKLYLIKEQENREKLSDIRG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 ++ GWG QIRSYV+QPY MVKD RT E + V+DG+LD FM A L Sbjct: 313 EVSDNGWGNQIRSYVMQPYTMVKDHRTGEETGNVQSVMDGNLDAFMNAYLRW 364 >gi|149374726|ref|ZP_01892500.1| peptide chain release factor 2 [Marinobacter algicola DG893] gi|149361429|gb|EDM49879.1| peptide chain release factor 2 [Marinobacter algicola DG893] Length = 351 Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats. Identities = 181/349 (51%), Positives = 243/349 (69%), Gaps = 1/349 (0%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 L GG+FD+D +RL+ + + E P +W++ A+ L +ER L+ + I + Sbjct: 2 SALKRSGGIFDYDQRSERLTEVERELEVPSVWEDPERAQALGKERSDLELIVRTIDNLTS 61 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 L D LLE+A EE+D E +L + E+E +F + SGE D+N+AYL++ AG Sbjct: 62 GLEDAEGLLEIADEEEDEGTAAEIEADLAGLDKELEKLEFRRMFSGEMDANNAYLDIQAG 121 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 +GGTE+QDW NMLLRMY RWAE+R FK E +E+ +G+ AGIKSAT+ I+G A+GWL+ E Sbjct: 122 SGGTEAQDWGNMLLRMYLRWAERRGFKAEIVELQEGDVAGIKSATIHIQGDYAFGWLRTE 181 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHRLVR SP+DS +RRHTSFSS++V P VDDS EIEI+ +D R+D YRASGAGGQHVN Sbjct: 182 TGVHRLVRKSPFDSGNRRHTSFSSVFVSPEVDDSFEIEINPADLRVDVYRASGAGGQHVN 241 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T+SAVR+TH PTG+VV CQ RSQH+NK QA L+AKL+E E+Q+R E +K Sbjct: 242 RTESAVRLTHNPTGIVVACQAGRSQHQNKDQAMKQLKAKLFEREMQERNAEKQKAEDAKA 301 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +IGWG QIRSYVL +KDLRT +E ++ VLDGD+D F++A+L + Sbjct: 302 DIGWGSQIRSYVLDD-SRIKDLRTKVETSNTQSVLDGDIDKFIEASLKM 349 >gi|227872846|ref|ZP_03991157.1| peptide chain release factor RF2 [Oribacterium sinus F0268] gi|227841316|gb|EEJ51635.1| peptide chain release factor RF2 [Oribacterium sinus F0268] Length = 378 Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats. Identities = 157/357 (43%), Positives = 219/357 (61%), Gaps = 3/357 (0%) Query: 2 KLSRQ---LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58 +LS + L L D D +R+ L+ E+P W + +A L E +HL + + Sbjct: 10 ELSSKEEPLQQLEAALDLDTKRKRIIELDRMMEEPDFWGDPEKANKLSTEARHLKDELEG 69 Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 ++ D L+++ EE+D S++ E + L ++ LLSGE DS + Sbjct: 70 FTALKGNYEDIEALIQMGKEENDDSVIPEIRELLDSFSERLDQMNTTLLLSGEYDSMNVI 129 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 L ++AGAGGTE+ DWA +L RMYTRWAE+ F + L+ DG+EAGIKS T+ + G AY Sbjct: 130 LRLNAGAGGTEANDWAGILYRMYTRWAERHGFTVKILDYLDGDEAGIKSVTMEVVGEYAY 189 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G+L+ E G+HRLVRISP+++ +R TSF S V P ++ I+IEI E D +++ +RASGA Sbjct: 190 GYLRSESGIHRLVRISPFNAQGKRQTSFVSCDVMPDIETDIDIEIREEDIKMEVFRASGA 249 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQH+N T SAVR+ HIPTG V CQ+ERSQ +NK +A ML+ KLY E +++E Sbjct: 250 GGQHINKTSSAVRLIHIPTGFVAACQEERSQLQNKNKAMQMLKTKLYLKEKEEQEAKLAG 309 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + GWG QIRSYVLQPY+MVKDLRT E + VLDGD+D F+ A L + Sbjct: 310 IRGEVKDNGWGSQIRSYVLQPYRMVKDLRTGEESGNTDAVLDGDIDRFISAYLKWMQ 366 >gi|293610588|ref|ZP_06692888.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826932|gb|EFF85297.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 337 Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats. Identities = 175/335 (52%), Positives = 238/335 (71%), Gaps = 1/335 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 +RL + + EDP +W + A+ + +E+ L+N I+ + + +L D +L+LA+E Sbjct: 2 KKERLEEVLRELEDPAIWNDQSRAQAMAKEKGELENVINVLDGLSTQLEDAKAMLDLAVE 61 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 DD S+L++ L + E+ +F + S D N Y+E+ +G+GGTE+QDWA+MLL Sbjct: 62 ADDESLLEDVQSELGAAEDELAKLEFRRMFSNPMDPNPCYVEIQSGSGGTEAQDWASMLL 121 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RW E+ FK E +E+ DG+ AGIKSAT+ ++G AYGWL+ E GVHRLVR SP+DS Sbjct: 122 RMYMRWIERHGFKAELMEVSDGDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDS 181 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 +RRHTSFS++++ P VDD+IEI+I+ SD R DTYRASGAGGQH+N TDSAVR+THIPTG Sbjct: 182 GNRRHTSFSAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTG 241 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV CQ +RSQH N+ AW LRA+LYELE+QKR E A E SK++IGWG QIRSYVL Sbjct: 242 IVVACQNQRSQHANRDHAWKQLRARLYELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLD 301 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +KDLRT +E ++ VLDGDLD F++A+L Sbjct: 302 D-SRIKDLRTGVENSNTGAVLDGDLDRFIEASLKQ 335 >gi|317051343|ref|YP_004112459.1| peptide chain release factor 2 [Desulfurispirillum indicum S5] gi|316946427|gb|ADU65903.1| Peptide chain release factor 2 [Desulfurispirillum indicum S5] Length = 367 Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats. Identities = 193/352 (54%), Positives = 241/352 (68%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + ++ D +RL+ L EDP LW + +A+ ++RE + L +A++ EI Sbjct: 12 MEEKVEFFRRCLDVPAKEERLAELVPMIEDPTLWNDPQQAQGILREDKMLKDALADFNEI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D +L E E++ + + V + LLS E D ++AYL ++ Sbjct: 72 HRLLEDVKVLHEFCQEDESNVDELTQNLAKL--EKLVADYELTVLLSDEHDPSNAYLTIN 129 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTESQDW +ML+RMYTRWAEKRKFK +E +GEEAGIKS TL I+G AYG LK Sbjct: 130 AGAGGTESQDWGSMLMRMYTRWAEKRKFKVTIMEYQEGEEAGIKSVTLFIEGLYAYGNLK 189 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DSN+RRHTSF+S++V P +DDSIE++I ESD RIDTYR+SGAGGQH Sbjct: 190 SETGVHRLVRISPFDSNARRHTSFTSVFVSPEIDDSIEVDIRESDLRIDTYRSSGAGGQH 249 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH PTGVV QCQ ERSQH+NK QA MLRAKLYELEL+K+ + E S Sbjct: 250 VNTTDSAVRITHTPTGVVTQCQSERSQHQNKEQAMKMLRAKLYELELEKKRQGLREVEDS 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K +I WG QIRSYVL PY+MVKDLRT E + VLDG LD+F+KA L + Sbjct: 310 KMDIAWGSQIRSYVLHPYKMVKDLRTRHETGNAEAVLDGALDEFIKAYLQWQ 361 >gi|328952688|ref|YP_004370022.1| hypothetical protein Desac_0974 [Desulfobacca acetoxidans DSM 11109] gi|328453012|gb|AEB08841.1| hypothetical protein Desac_0974 [Desulfobacca acetoxidans DSM 11109] Length = 369 Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats. Identities = 170/349 (48%), Positives = 243/349 (69%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS++ + L G D + RL+ + P WQN ++ +++ER L + ++ +E Sbjct: 15 LSQRYSQLRGRLDLEKKKARLAEIEVLAAKPDFWQNSSQSSQILKERGALTHLLTVWQEQ 74 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ D +LLELA EE D + +L+ + ++ + E LL GE D DA + +H Sbjct: 75 GKKIEDLEVLLELAQEETDEQAFVDVLTDLKVQERALQQLELEMLLGGEDDDKDAIITIH 134 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA MLLRMY R+AE++ F+TE ++ G+EAG+KS+T + GP+AYG+LK Sbjct: 135 AGAGGTEAQDWAEMLLRMYLRFAERQGFRTEIYDLLPGDEAGVKSSTFAVSGPHAYGYLK 194 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVRISP+D++ RRHTSF++++VYP D+ I+I++ E D RIDT+RASGAGGQH Sbjct: 195 SESGIHRLVRISPFDASGRRHTSFAAVFVYPEADEDIQIDLQEKDLRIDTFRASGAGGQH 254 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T SAVR+THIPTG+VV Q ERSQH+N+ A +L+++LYELE KR+E A + + Sbjct: 255 VNKTSSAVRLTHIPTGIVVSMQNERSQHRNRELAMRVLKSRLYELEKSKRQEKAQVVLDA 314 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + +I WG QIRSYVLQPY+++KD RT E+ + VLDGDLD F++A L Sbjct: 315 QKDIAWGSQIRSYVLQPYRLIKDHRTKHEEGNVEAVLDGDLDAFIEAYL 363 >gi|152979178|ref|YP_001344807.1| peptide chain release factor 2 [Actinobacillus succinogenes 130Z] gi|150840901|gb|ABR74872.1| peptide chain release factor 2 [Actinobacillus succinogenes 130Z] Length = 335 Score = 272 bits (696), Expect = 5e-71, Method: Composition-based stats. Identities = 174/333 (52%), Positives = 234/333 (70%), Gaps = 1/333 (0%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 +RL +N + E P +W +A+ L +ER L+ + IK++ L D LLELA+E + Sbjct: 2 ERLEEVNAELEQPDVWNEPEKAQALGKERSSLEAVVDTIKKLDQGLEDVDGLLELAVEGE 61 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D E L ++ ++ +F + SGE D+ D Y+++ AG+GGTE+QDW MLLRM Sbjct: 62 DQETFDEAVAELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQDWTEMLLRM 121 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y RWAE + FKTE +E+ DG+ AG+KSAT+ + G A+GWL+ E G+HRLVR SP+DSN+ Sbjct: 122 YLRWAESKGFKTELMEVSDGDVAGLKSATVKVSGEYAFGWLRTETGIHRLVRKSPFDSNN 181 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 RRHTSF++ +VYP +DD I+I+I+ +D RID YRASGAGGQHVN T+SAVRITHIP+G+V Sbjct: 182 RRHTSFAAAFVYPEIDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVRITHIPSGIV 241 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 VQCQ +RSQHKNK Q L+AKLYE+ELQK+ E SK++IGWG QIRSYVL Sbjct: 242 VQCQNDRSQHKNKDQCMKQLKAKLYEMELQKKNADKQALEDSKSDIGWGSQIRSYVLDD- 300 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +KDLRT +E + VLDGDLD F++A+L Sbjct: 301 SRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 333 >gi|76787098|ref|YP_329299.1| peptide chain release factor 2 [Streptococcus agalactiae A909] gi|123602195|sp|Q3K2F4|RF2_STRA1 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|76562155|gb|ABA44739.1| peptide chain release factor 2, programmed frameshift [Streptococcus agalactiae A909] Length = 365 Score = 272 bits (695), Expect = 6e-71, Method: Composition-based stats. Identities = 152/354 (42%), Positives = 220/354 (62%), Gaps = 2/354 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 ++ +L D D + ++ L + +P W + I A+ +E L Sbjct: 11 VENKEKLTSFRRSLDLDRLEEEIALLENQMTEPDFWNDNIAAQKTSQELNELKGKYDTFH 70 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 +Q+ + +LLE+ E+D + +E +NL ++ + + LLS D N+A LE Sbjct: 71 NMQELSDETELLLEMLDEDDS--LKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILE 128 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +H G+GGTE+QDW ++LLRMYTR+ FK E L+ G+EAGIKS TL +GPNAYG Sbjct: 129 IHPGSGGTEAQDWGDLLLRMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGL 188 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E GVHRLVRISP+DS RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGG Sbjct: 189 LKSEMGVHRLVRISPFDSAKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGG 248 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q+VN + VR+THIPTG+VV +R+Q+ N+ +A ML+AKLY+LE +K+ + + + Sbjct: 249 QNVNKVSTGVRLTHIPTGIVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALK 308 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K EI WG QIRSYV PY MVKD RTN E V+DG+++ F+ A L + Sbjct: 309 GDKKEITWGSQIRSYVFTPYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 362 >gi|332297634|ref|YP_004439556.1| Peptide chain release factor 2 [Treponema brennaborense DSM 12168] gi|332180737|gb|AEE16425.1| Peptide chain release factor 2 [Treponema brennaborense DSM 12168] Length = 378 Score = 272 bits (695), Expect = 6e-71, Method: Composition-based stats. Identities = 170/352 (48%), Positives = 228/352 (64%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + G D + +S + + W+N +A+ +M + + L N I +++ Sbjct: 12 LKEDILNVWGRLDVPSIEAAISEKEALSGESGFWENPAKAEKVMTDIKQLKNRIEPWRDL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L EL +E D S+ E + + E + +LLSGE D N A+L +H Sbjct: 72 IAAVDDAEALYELGMESGDESLEAELKAAYDQAQAEYDRLSILNLLSGEVDRNGAFLTIH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA ML RMY RWAE+R FK E +++ + E GIKS TL I G AYG+LK Sbjct: 132 AGAGGTEACDWAQMLCRMYVRWAERRGFKVETVDMLEAE-GGIKSVTLQISGEYAYGYLK 190 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVRISP+DSN+RRHTSFSS++V+PV+DD+IE++I D R+DTYRA GAGGQH Sbjct: 191 SEAGIHRLVRISPFDSNARRHTSFSSVYVFPVLDDTIEVDIRPEDLRVDTYRAGGAGGQH 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSAVR TH+PTG+VV CQ ERSQ N+A A +MLRA+LYE +++E+ S Sbjct: 251 VNKTDSAVRFTHLPTGIVVACQTERSQTMNRATAMSMLRARLYEYYREQKEKENAKFASE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K +I WG QIRSYV QPY MVKD RT E + V+DG +D F++A LA + Sbjct: 311 KKDISWGNQIRSYVFQPYTMVKDHRTKHEIGNIQSVMDGAIDPFIEAFLAAQ 362 >gi|331701705|ref|YP_004398664.1| peptide chain release factor 2 [Lactobacillus buchneri NRRL B-30929] gi|329129048|gb|AEB73601.1| Peptide chain release factor 2 [Lactobacillus buchneri NRRL B-30929] Length = 373 Score = 272 bits (695), Expect = 6e-71, Method: Composition-based stats. Identities = 158/353 (44%), Positives = 228/353 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + ++ G D D + ++ +K +P W + A+ L+ + L Sbjct: 14 EMQKAIDGFGRSLDLDALSESIAINESKMAEPGFWDDQEAAQKLIDQTNQLKTKRDNFVG 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++++L D + LEL E+ + E + +++K +++ Q LL+G+ D N+A LE+ Sbjct: 74 LKNKLDDLKVTLELIEEDSHSGMEGEFETDEKQLKTKLDRYQLNLLLNGKYDHNNAILEI 133 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTE+QDW +MLLRMYTRWAE F + L+ G+ AG+ S +LLI G NAYG+L Sbjct: 134 HPGAGGTEAQDWGSMLLRMYTRWAEAHGFTVQTLDYQVGDVAGLNSVSLLISGENAYGYL 193 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E+G+HRLVR+SP+DS RRHTSF+S+ V P ++D + I+I+ D RID YR+SGAGGQ Sbjct: 194 RSEKGIHRLVRLSPFDSAGRRHTSFASVDVMPELNDDVSIDINPDDLRIDVYRSSGAGGQ 253 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+N T SAVRITH+PTG+V Q +RSQ +N+ A NML++KLYELE +K+ E E Sbjct: 254 HINKTSSAVRITHLPTGIVAASQAQRSQLQNRQTAMNMLKSKLYELEEEKKAEEKAKIEG 313 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +IGWG QIRSYV PY MVKD RTN E + + V+DGDLD F+ A L + Sbjct: 314 EQKDIGWGSQIRSYVFHPYSMVKDHRTNYETANVNGVMDGDLDPFINAYLQWQ 366 >gi|116511800|ref|YP_809016.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris SK11] gi|122940216|sp|Q02ZM8|RF2_LACLS RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|116107454|gb|ABJ72594.1| bacterial peptide chain release factor 2 (bRF-2) [Lactococcus lactis subsp. cremoris SK11] Length = 365 Score = 272 bits (695), Expect = 6e-71, Method: Composition-based stats. Identities = 148/350 (42%), Positives = 221/350 (63%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 S ++N D D + ++ L P W + A+ ++ E L + + Sbjct: 14 SEKINGFRDSLDLDRLEEEIALLENDMAQPEFWNDQAAAQKVIDESNALKAKYDNYQAMN 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + L + +LE+ EE D + E + + ++E + E +L+ D +A LE+H Sbjct: 74 NMLEEAQTMLEMLQEEADEDMQVELEEMTTALGQKIESYELEIMLNQPYDHMNAVLEIHP 133 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTESQDW +ML+RMYTRW E FK E L+ DG+ AG+KS + G NAYG+L+G Sbjct: 134 GSGGTESQDWGSMLMRMYTRWGEAHGFKVEILDYQDGDVAGLKSVAIRFVGRNAYGFLRG 193 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+DS +RRHTSF+S+ V P +DDSIE+E+ ++D ++DT+R+ GAGGQ+V Sbjct: 194 EKGVHRLVRISPFDSANRRHTSFTSVDVMPELDDSIEVEVRDADVKMDTFRSGGAGGQNV 253 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N + VR+TH+PTG+VVQ +R+Q+ N+ +A ML++KLY+LE+ K++ + + Sbjct: 254 NKVSTGVRLTHVPTGIVVQSTMDRTQYGNRDKAMAMLKSKLYQLEMDKKQAEVDELRGDQ 313 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +EI WG QIRSYV PYQ+VKD RT E S+V+DG++D F+ A L Sbjct: 314 SEISWGSQIRSYVFMPYQLVKDTRTGYETGQISNVMDGEIDGFINAYLRW 363 >gi|209548908|ref|YP_002280825.1| peptide chain release factor 2 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534664|gb|ACI54599.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 376 Score = 272 bits (695), Expect = 7e-71, Method: Composition-based stats. Identities = 241/353 (68%), Positives = 296/353 (83%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + L DWD A++RL +LN K EDP+LW + EA+ LMRERQ LD+ IS +K+ Sbjct: 11 ETKQAITLLRRHLDWDQAIRRLDWLNNKAEDPNLWNDSTEAQKLMRERQQLDDGISGVKQ 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ +L DN+ L+EL EE D +++E D L+ +K E +Q E++LSGEAD ND YLEV Sbjct: 71 LEQQLNDNIELIELGEEEGDEGVVKEAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H+GAGGTESQDWANMLLRMYTRWAE+++FK E LE+HDGEEAGIKSATLL+KG NAYGWL Sbjct: 131 HSGAGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDSN+RRHTSFSSIWVYPVVDDSI+IEI+E DCRIDTYR+SGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSIQIEINEGDCRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PTG+VVQCQQERSQHKN+A+AW+MLRA++YE EL+KRE+ A+ + Sbjct: 251 HVNTTDSAVRITHMPTGIVVQCQQERSQHKNRAKAWDMLRARMYEAELKKREDAASAEAA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 SKT+IGWG QIRSYVLQPYQ+VKDLRT + T+P DVLDG+L++FM+A LA + Sbjct: 311 SKTDIGWGHQIRSYVLQPYQLVKDLRTGVASTAPDDVLDGELNEFMEAALAHR 363 >gi|311070034|ref|YP_003974957.1| peptide chain release factor 2 [Bacillus atrophaeus 1942] gi|310870551|gb|ADP34026.1| peptide chain release factor 2 [Bacillus atrophaeus 1942] Length = 327 Score = 272 bits (695), Expect = 7e-71, Method: Composition-based stats. Identities = 165/325 (50%), Positives = 219/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ ++ E L + ++ K++ + + + +L EE D + E Sbjct: 1 MADPEFWNDQQKAQTVINEANGLKDYVNSYKKLSESHEELQMTHDLLKEEPDEELQLELV 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L+ + E + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+R Sbjct: 61 KELKTLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG++K E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYIKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P ++ I+I+I D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ Sbjct: 181 DVMPEFNEEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A ML++KLY+ +++++ + + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNRDRAMKMLKSKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGD+D F+ A L K Sbjct: 301 TEMGNVQAVMDGDIDVFIDAYLRSK 325 >gi|295401151|ref|ZP_06811124.1| peptide chain release factor 2 [Geobacillus thermoglucosidasius C56-YS93] gi|294976744|gb|EFG52349.1| peptide chain release factor 2 [Geobacillus thermoglucosidasius C56-YS93] Length = 327 Score = 272 bits (695), Expect = 7e-71, Method: Composition-based stats. Identities = 173/325 (53%), Positives = 223/325 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + A+ ++ E L + + + +++R + + EL EE D + QE Sbjct: 1 MAAPDFWDDQKAAQTVINEANALKDLVGEFQSLEERFENLEVTYELIKEEPDEDLQQELV 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +R+ + + + LL+ D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEK+ Sbjct: 61 TEAKRLTKDFSEFELQLLLNEPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ GEEAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S Sbjct: 121 FKVETLDYLPGEEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD IEIEI + RIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VV CQ ERSQ Sbjct: 181 EVIPEMDDDIEIEIRPEEIRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A NML+AKLY+ +L++++ + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNREKALNMLKAKLYQKKLEEQQAELAEIRGEQKEIGWGNQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DG++D F+ A L K Sbjct: 301 VEVGNVQAVMDGEIDIFIDAYLRSK 325 >gi|225572941|ref|ZP_03781696.1| hypothetical protein RUMHYD_01132 [Blautia hydrogenotrophica DSM 10507] gi|225039699|gb|EEG49945.1| hypothetical protein RUMHYD_01132 [Blautia hydrogenotrophica DSM 10507] Length = 348 Score = 272 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 164/336 (48%), Positives = 232/336 (69%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 N +R+ L + E P W + E++ M+E +++ + + + ++ ++ D L+E+ Sbjct: 3 NKEKRIEELEREMEAPDFWDDAEESQKKMKELKYMKDDLQTYENLRTQMEDMETLIEMGY 62 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 EE+D ++ E + L + + + ++LLSGE DSNDA + +HAGAGGTES DWA+ML Sbjct: 63 EENDPDLIPEIQEMLDEFQKSFDDIRVKTLLSGEYDSNDAIVTLHAGAGGTESCDWASML 122 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMYTRWA+K+ F E L+ DG+EAGIKS T ++G NAYG+LK E+GVHRLVRISP++ Sbjct: 123 YRMYTRWADKKGFSLEVLDYLDGDEAGIKSVTFEVRGENAYGYLKSEKGVHRLVRISPFN 182 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 + +R TSF S V P +++ +++EI + D R+DTYR+SGAGGQH+N T SA+RITH+PT Sbjct: 183 AAGKRQTSFVSCDVMPDIEEDVDVEIRDDDIRVDTYRSSGAGGQHINKTSSAIRITHLPT 242 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ ERSQH NK +A ML+AKLY L+ Q+ EE + TEIGWG QIRSYV+ Sbjct: 243 GIVVQCQNERSQHMNKDKAMQMLKAKLYLLKQQENEEKLSGIRGEVTEIGWGNQIRSYVM 302 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QPY MVKD RT+ E + V+DG++D F+ A L Sbjct: 303 QPYTMVKDHRTSEETGNVDSVMDGNIDLFINAYLKW 338 >gi|256390605|ref|YP_003112169.1| peptide chain release factor 2 [Catenulispora acidiphila DSM 44928] gi|256356831|gb|ACU70328.1| peptide chain release factor 2 [Catenulispora acidiphila DSM 44928] Length = 368 Score = 272 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 151/353 (42%), Positives = 216/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + D +++ L + P LW + +A+ + + L ++ + Sbjct: 12 LRTTMASIEAVLDLGKLRAQIADLEEQASAPDLWDDQAKAQAVTSKLSGLQAELNRFSTL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 RL D +L EL E D L E L + V + +LLSGE D+ +A + + Sbjct: 72 NRRLEDIEVLFELGQSEGDEDALAEVQGELVDVSKAVGELEVRTLLSGEYDAREALVTLR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A MLLRMYTRWAE+ ++ E + EEAGIKSATL +K P AYG L Sbjct: 132 AEAGGVDAADFAEMLLRMYTRWAERHNYQYEVYDTSYAEEAGIKSATLTVKAPYAYGTLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ S ++I E + R+D YR+SG GGQ Sbjct: 192 VEQGTHRLVRISPFDNQGRRQTSFAGVEVVPVVEQSDHVDIPEDELRVDVYRSSGPGGQG 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+P+G+VV CQ ERSQ +N+A A +L+AKL + ++ + + + Sbjct: 252 VNTTDSAVRITHLPSGIVVSCQNERSQIQNRASAMAVLQAKLLQRRREEEQAKMDALKDD 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQ+VKDLRTN E + + VLDGD+D+F++A + +K Sbjct: 312 -SSGSWGNQMRSYVLHPYQLVKDLRTNYETGNTTAVLDGDIDEFIEAGIRWRK 363 >gi|125624350|ref|YP_001032833.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris MG1363] gi|166223629|sp|A2RLF5|RF2_LACLM RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|124493158|emb|CAL98122.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris MG1363] gi|300071134|gb|ADJ60534.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris NZ9000] Length = 365 Score = 272 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 148/350 (42%), Positives = 220/350 (62%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 S ++N D D + ++ L P W + A+ ++ E L + + Sbjct: 14 SEKINGFRDSLDLDRLEEEIALLENDMAQPEFWNDQAAAQKVIDESNALKAKYDNYQAMN 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L + +LE+ EE D + E + + ++E + E +L+ D +A LE+H Sbjct: 74 TMLEEAQTMLEMLQEEADEDMQVELEEMTTALGQKIESYELEIMLNQPYDHMNAVLEIHP 133 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTESQDW +ML+RMYTRW E FK E L+ DG+ AG+KS + G NAYG+L+G Sbjct: 134 GSGGTESQDWGSMLMRMYTRWGEAHGFKVEILDYQDGDVAGLKSVAIRFVGRNAYGFLRG 193 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+DS +RRHTSF+S+ V P +DDSIE+E+ ++D ++DT+R+ GAGGQ+V Sbjct: 194 EKGVHRLVRISPFDSANRRHTSFTSVDVMPELDDSIEVEVRDADVKMDTFRSGGAGGQNV 253 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N + VR+TH+PTG+VVQ +R+Q+ N+ +A ML++KLY+LE+ K++ + + Sbjct: 254 NKVSTGVRLTHVPTGIVVQSTMDRTQYGNRDKAMAMLKSKLYQLEMDKKQAEVDELRGDQ 313 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +EI WG QIRSYV PYQ+VKD RT E S+V+DG++D F+ A L Sbjct: 314 SEISWGSQIRSYVFMPYQLVKDTRTGYETGQISNVMDGEIDGFINAYLRW 363 >gi|311031920|ref|ZP_07710010.1| peptide chain release factor 2 [Bacillus sp. m3-13] Length = 326 Score = 272 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 172/325 (52%), Positives = 219/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N A++++ E L + E+ + + + EL EE D + E Sbjct: 1 MSNPEFWNNQSSAQVVINEANALKEPVGQFHELSENYENLQLTYELVKEEPDAELQAELG 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + + + + LLSGE D N+A LE+H GAGGTESQDW ++LLRMYTRWAE++ Sbjct: 61 SEVKTVAEDFNKFELQLLLSGEHDKNNAILELHPGAGGTESQDWGSLLLRMYTRWAERKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P DD+IEI+I D +IDTYRASGAGGQH+NTTDSAVRITH+PT VVV CQ ERSQ Sbjct: 181 EVMPEFDDNIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNVVVTCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A ML+AKLY+ +L +++ + + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 IKNRERAMKMLQAKLYQKKLDEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L K Sbjct: 301 TEVGNTQAVMDGDLDPFIDAYLRSK 325 >gi|225016122|ref|ZP_03705355.1| hypothetical protein CLOSTMETH_00066 [Clostridium methylpentosum DSM 5476] gi|224951119|gb|EEG32328.1| hypothetical protein CLOSTMETH_00066 [Clostridium methylpentosum DSM 5476] Length = 375 Score = 272 bits (694), Expect = 7e-71, Method: Composition-based stats. Identities = 172/352 (48%), Positives = 236/352 (67%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ L D D VQ ++ L P W ++ ++ ++++ L N I+ ++I Sbjct: 19 LKPKIQQLRAALDVDALVQEVAQLEETAAQPGFWDDLDNSQKVLQKTTRLKNTIAEFEKI 78 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L+E A EEDD S E NL+ I+ +V+ ++ +LLSGE D+N+A L H Sbjct: 79 ESLYEDTQTLVEFAFEEDDESCSDEVKANLKSIQDQVDAQRLATLLSGEYDANNAILTFH 138 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DW ML RMY+ WAE+ F+T+ L+ +GEEAGIKS ++LI G NAYG+LK Sbjct: 139 AGAGGTEAMDWVEMLFRMYSHWAERHGFQTKTLDFVEGEEAGIKSISILIVGTNAYGFLK 198 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR+SP+DS+ RRHTSF+S+ V P VDDSIE+EI D R+DTYR+SGAGGQH Sbjct: 199 SETGVHRLVRVSPFDSSGRRHTSFASLEVIPEVDDSIEVEIRPEDLRVDTYRSSGAGGQH 258 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SA+RITH+PTG+V CQ ERSQ +N+A A ML++KL E++ ++ + + + Sbjct: 259 VNKTESAIRITHLPTGIVTACQNERSQMQNRAVAMKMLKSKLIEIKEREHLDKISDIKGE 318 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EI WG QIRSYV PY +VKD RT E + S V+DGDLD F+ A L K Sbjct: 319 QKEIAWGSQIRSYVFMPYTLVKDHRTGFENGNISAVMDGDLDGFINAYLVAK 370 >gi|307294100|ref|ZP_07573944.1| peptide chain release factor 2 [Sphingobium chlorophenolicum L-1] gi|306880251|gb|EFN11468.1| peptide chain release factor 2 [Sphingobium chlorophenolicum L-1] Length = 375 Score = 272 bits (694), Expect = 8e-71, Method: Composition-based stats. Identities = 209/353 (59%), Positives = 264/353 (74%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ L+ L DWD A++RL LN + EDP LW N A+ +MRER L+ AI + Sbjct: 11 RIDAALDLLRRFLDWDRALRRLDELNARVEDPTLWDNQKLAQEVMRERTRLEAAIGATRA 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I D L+E+A E D ++ E +L+ + + + ++LL+GEAD++D YLE+ Sbjct: 71 IDSEKTDTAELIEMADAEGDEDMVTEAIASLKALADRADEDKIKALLAGEADASDTYLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA ML RMY RWAE+R +K E ++ G++AGIKSAT L KG NAYG+ Sbjct: 131 HAGAGGTESQDWAEMLSRMYRRWAERRGYKVELVDYQAGDQAGIKSATFLFKGENAYGYA 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD+IEIE++ESD +IDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDNIEIEVNESDLKIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+P+G++V Q +RSQHKN+A A NML+A+LYE EL++REE A+ Sbjct: 251 HVNTTDSAVRITHVPSGIIVASQNDRSQHKNRATAMNMLKARLYEAELRRREEAASGEYQ 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +KTEIGWG QIRSYVLQPYQ+VKDLRT + TSP DVLDG LD FM A L+ K Sbjct: 311 AKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTSPDDVLDGALDPFMAAALSQK 363 >gi|103488652|ref|YP_618213.1| peptide chain release factor 2 [Sphingopyxis alaskensis RB2256] gi|98978729|gb|ABF54880.1| bacterial peptide chain release factor 2 (bRF-2) [Sphingopyxis alaskensis RB2256] Length = 375 Score = 272 bits (694), Expect = 8e-71, Method: Composition-based stats. Identities = 222/353 (62%), Positives = 265/353 (75%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K++ L L DWD AV+RL LN K EDP LW N A+ +MRER+ LD AI+ + Sbjct: 11 KITAALALLRRFLDWDRAVRRLDELNAKVEDPTLWDNPKAAQDVMRERRRLDEAITATRA 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ D L+ELA E D +++ E +L + E + ++LL+GEAD NDAY+EV Sbjct: 71 IERECADTAELIELAEMEGDEAMVDEAVASLAALAARAEEDKVKALLAGEADGNDAYIEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA ML RMY RWAEKR K E +E GE+AGIKSAT+L+KG NAYG+ Sbjct: 131 HAGAGGTESQDWAEMLQRMYMRWAEKRGMKVELIEYQAGEQAGIKSATMLVKGENAYGYA 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD+IEIEI+E D +IDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDNIEIEINEGDLKIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG+VV Q +RSQHKN+A A ML+A+LYE ELQKRE A+ Sbjct: 251 HVNTTDSAVRITHIPTGIVVASQNDRSQHKNRATAMGMLKARLYEAELQKREAAASGEYQ 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +KTEIGWG QIRSYVLQPYQ+VKDLRT + T+P DVLDG LD FM A L+ K Sbjct: 311 AKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTAPGDVLDGALDPFMAAALSQK 363 >gi|104780459|ref|YP_606957.1| peptide chain release factor 2 [Pseudomonas entomophila L48] gi|95109446|emb|CAK14147.1| peptide chain release factor 2 [Pseudomonas entomophila L48] Length = 364 Score = 272 bits (694), Expect = 8e-71, Method: Composition-based stats. Identities = 182/351 (51%), Positives = 243/351 (69%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + G D+D+ RL +N + ED +W A+ L RER L + + ++ Sbjct: 13 LTERSQSIRGYLDYDHKHDRLVEVNRELEDAAVWNKPEYAQALGRERAMLAQVVETLDKL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LL++A+EE+D + + L+ ++ ++ +F + SGE D N+AYL++ Sbjct: 73 SGGLADCQDLLDMAVEENDEGAVGDVVTELEGLEEKLAQLEFRRMFSGEMDMNNAYLDIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWAN+LLRMY RWA+KR F +E+ +GE AGIK AT+ IKG A+GWL+ Sbjct: 133 AGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ SD RIDTYR+SGAGGQH Sbjct: 193 TEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPSDLRIDTYRSSGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT VV CQ ERSQH NK A MLRAKLYELE+QKR + E S Sbjct: 253 VNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDS 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IGWG QIRSYVL +KDLRT +E++ VLDGDLD +++A+L Sbjct: 313 KSDIGWGHQIRSYVLDD-SRIKDLRTGVERSDCQKVLDGDLDQYLEASLKQ 362 >gi|323706500|ref|ZP_08118060.1| peptide chain release factor 2 [Thermoanaerobacterium xylanolyticum LX-11] gi|323534162|gb|EGB23953.1| peptide chain release factor 2 [Thermoanaerobacterium xylanolyticum LX-11] Length = 327 Score = 272 bits (694), Expect = 8e-71, Method: Composition-based stats. Identities = 155/325 (47%), Positives = 224/325 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W ++ + + L ++++ L IS + ++ + D L+EL LEE D S+ QE Sbjct: 1 MSEPDFWNDLEKFQELSKKQKDLKEIISEYEALEKQWEDLHTLIELGLEEGDESLSQEVH 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + + ++ + ++LLSG D N+A L +HAGAGGTE+QDW MLLRMY RWA + Sbjct: 61 EEYKALSKKINDMKIKTLLSGPYDKNNAILSIHAGAGGTEAQDWTEMLLRMYMRWASSKN 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + E ++ G++AG+KS T+++KGP AYG+LK E GVHRLVRISP+D+ RRHTSF+ + Sbjct: 121 YDVETVDYLPGDDAGVKSVTIMVKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD I+++I D +IDTYR+SGAGGQHVN T+SA+RITHIPTG++VQCQ ERSQ Sbjct: 181 EVLPEIDDDIKVDIRPEDLKIDTYRSSGAGGQHVNKTESAIRITHIPTGIIVQCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A ML+AKL ++ +++++E + E GWG QIRSYV QPY +VKD RTN Sbjct: 241 MQNRETAMKMLKAKLMDMMIKEQKEKIEDLKGEHKEAGWGNQIRSYVFQPYTLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + + V+DG++DDF+ A L K Sbjct: 301 FEVGNVNAVMDGEIDDFINAYLKQK 325 >gi|74316939|ref|YP_314679.1| peptide chain release factor 2 [Thiobacillus denitrificans ATCC 25259] gi|74056434|gb|AAZ96874.1| peptide chain release factor 2 [Thiobacillus denitrificans ATCC 25259] Length = 349 Score = 272 bits (694), Expect = 9e-71, Method: Composition-based stats. Identities = 173/343 (50%), Positives = 242/343 (70%), Gaps = 1/343 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG FD+ RL + +E P W + A+ L RER+ L++ + + + L D Sbjct: 6 GGFFDYPVKKDRLEEVVRLSEAPDFWNDAARAQELGRERKSLEDVVLVLDRVTSGLKDAG 65 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L E+A EE+D L ++ ++ +V +F + S AD ++ +L++ AGAGGTE+ Sbjct: 66 ELFEMAREENDDDTLAAVQADIDGLEKDVATLEFRRMFSNPADPSNCFLDIQAGAGGTEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA+MLLR Y ++AE++ FK E LE +G+ AGIKSA++ I+G AYG+L+ E GVHRL Sbjct: 126 CDWASMLLRQYLKYAERKGFKAELLEESEGDVAGIKSASIKIEGDYAYGYLRTETGVHRL 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS+ RHTSF+S++VYP VDDSIE+EI+ +D R+DTYRASGAGGQH+N TDSAV Sbjct: 186 VRKSPFDSSGGRHTSFASVFVYPEVDDSIEVEINPADLRVDTYRASGAGGQHINKTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIP+G+VVQCQ +RSQHKN+A+A +ML++KLYE EL+KR+ + E+ K ++GWG Sbjct: 246 RITHIPSGIVVQCQNDRSQHKNRAEAMSMLKSKLYEAELRKRQAEQDKLEAGKADVGWGH 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 306 QIRSYVLD-NSRIKDLRTNVEVSATQKVLDGDLDVFIEASLKQ 347 >gi|171910508|ref|ZP_02925978.1| peptide chain release factor 2 [Verrucomicrobium spinosum DSM 4136] Length = 359 Score = 272 bits (694), Expect = 9e-71, Method: Composition-based stats. Identities = 155/349 (44%), Positives = 218/349 (62%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + GG+FD L L + P W N A+ + +L N I ++E++ RL Sbjct: 1 MAGSGGIFDVGKLKSDLETLEDELARPEFWDNQERARKTIDTVNNLKNRILPLEELERRL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D +L E+A E+D + E ++ + + LL+GE D A++ +H GAG Sbjct: 61 EDFFVLGEIAQHENDLASWTEVEKEYHAMEKALSDFELAMLLTGELDKKGAFVTIHCGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTES DWA+MLLRMY RW E+ +KTE ++ GEE G++SA + G A+G L E+G Sbjct: 121 GTESCDWADMLLRMYQRWCERSGYKTEMVDFAPGEEVGVRSAVFRVTGDYAFGKLNCERG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+DS RRHTSF+S+ V P VD+ I IE++E+D + +TYR+ G GGQ+VN Sbjct: 181 VHRLVRISPFDSAKRRHTSFASVDVTPEVDEDIGIELNEADIKFETYRSGGKGGQNVNKV 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 ++AVR+ H PTG++V CQ +RSQ KN+ A NML+AKLY+LE K++ K ++ Sbjct: 241 ETAVRLIHEPTGIIVNCQVQRSQGKNREMAMNMLKAKLYQLEQDKKKTEMERQYGEKGDV 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG QIRSYV QPYQMVKD RT + + +V+DGDLD F++A L +K Sbjct: 301 AWGSQIRSYVFQPYQMVKDHRTGEKTGNVGNVMDGDLDAFIEAKLRGRK 349 >gi|157803496|ref|YP_001492045.1| peptide chain release factor 2 [Rickettsia canadensis str. McKiel] gi|157784759|gb|ABV73260.1| peptide chain release factor 2 [Rickettsia canadensis str. McKiel] Length = 350 Score = 271 bits (693), Expect = 9e-71, Method: Composition-based stats. Identities = 187/344 (54%), Positives = 248/344 (72%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 + GLFD A +RL L T +P LW + + A+ L+RE+ L+ ++ + +++ L D Sbjct: 1 MRGLFDIKTATKRLKELAELTTNPDLWNDQVNAQTLLREKSTLEEKLNTLNKLKSNLKDT 60 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L L LA E+D L + +L+ + + + E L SGEAD N+ +LE++AGAGGTE Sbjct: 61 LELEALAETENDLETLAQVKQDLKNLSIIAAKFETEYLFSGEADCNNCFLEINAGAGGTE 120 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 S DWA++++RMY R+AE+ FKTE + + +GEEAGIKS T+ I G AYGW K E GVHR Sbjct: 121 SHDWASIMMRMYLRFAERLDFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTEAGVHR 180 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+++ +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQHVNTTDSA Sbjct: 181 LVRISPFNAAGKRMTSFASSWVYPEIDDNISITIDDKDLRIDTFRASGAGGQHVNTTDSA 240 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG V QCQ +RSQHKNKAQA ML+AKLYELE+QKR + N ++KT+ WG Sbjct: 241 VRITHIPTGTVTQCQSDRSQHKNKAQAMRMLKAKLYELEMQKRTDNINEQNAAKTDNSWG 300 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSY+LQPYQMVKDLRT+ E + VLDG+L++F+ A+LA+ Sbjct: 301 HQIRSYILQPYQMVKDLRTDYETSDTRGVLDGNLEEFVSASLAM 344 >gi|308271179|emb|CBX27788.1| Peptide chain release factor 2 [uncultured Desulfobacterium sp.] Length = 344 Score = 271 bits (693), Expect = 9e-71, Method: Composition-based stats. Identities = 167/343 (48%), Positives = 239/343 (69%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 +FD DN +RL+ + + W+N +A L++ER + + K + L + IL Sbjct: 1 MFDLDNKEKRLNEIEFLISKDNFWENHDKATPLLKERTFISGKVESFKSLLKDLEECEIL 60 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 LA+EE D ++E S +Q++K ++ +L GE D N+A + ++AGAGGTE+QD Sbjct: 61 YSLAIEESDSKTIEEVSVQIQKLKEKINKLSLLLMLDGEDDINNAIVSINAGAGGTEAQD 120 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 W+ +L RMY+RW EK+ FK+ ++ G+EAGIKS T+ ++G AYG+LK E GVHRLVR Sbjct: 121 WSEILFRMYSRWIEKKGFKSTIIDFQPGDEAGIKSVTITVEGDYAYGYLKTEIGVHRLVR 180 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+++N +RHTSF+S++VYP +D+SIEI+I E D RID +R+SGAGGQHVN T SA+RI Sbjct: 181 ISPFNANGKRHTSFASVFVYPELDNSIEIDIDEKDLRIDIFRSSGAGGQHVNKTSSAIRI 240 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 TH+PTG+VVQCQQERSQHKNK A ++L+++LY+LE QK+++ K EI WG QI Sbjct: 241 THLPTGIVVQCQQERSQHKNKDMAMSVLKSRLYQLEKQKQDDKMQEIHDGKDEIAWGNQI 300 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 RSYVL PYQ++KD R N+E + + VLDG +D F++ L +K Sbjct: 301 RSYVLHPYQLIKDHRINLETGNAAAVLDGAIDPFIEGVLLSRK 343 >gi|332978282|gb|EGK15010.1| peptide chain release factor RF2 [Psychrobacter sp. 1501(2011)] Length = 325 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 170/324 (52%), Positives = 225/324 (69%), Gaps = 1/324 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P LW + A + +E+ LD I+ I ++ L D +LELA+E DD +L + Sbjct: 1 MESPELWNDPERATKISKEKSQLDAIINTITGLETTLEDAAAMLELAVEADDEGLLSDVQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L + +VE +F+ + +GE D N+ ++++ +G+GGTE+QDWA MLLRMYTRW E Sbjct: 61 QELNAAQAQVEDLEFKRMFNGEMDPNNCFVDIQSGSGGTEAQDWAEMLLRMYTRWCESHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK + E+ G AG+KSA+ + G A+GWL+ E GVHRLVR SP+DSN+ RHTSF+++ Sbjct: 121 FKVDVTEVSAGSVAGVKSASFKVTGDYAFGWLRTETGVHRLVRKSPFDSNNGRHTSFAAV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 +V P +DD I+I+I+ +D RIDTYR+SGAGGQHVNTTDSAVRITH PT VVQCQ ERSQ Sbjct: 181 FVSPEIDDDIDIDINPADLRIDTYRSSGAGGQHVNTTDSAVRITHEPTNTVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NKA A MLRAKLYELE+QKR E E +K+++GWG QIRSYVL +KDLRT Sbjct: 241 HGNKATAMKMLRAKLYELEMQKRMEKQQAVEDNKSDVGWGSQIRSYVLDD-SRIKDLRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 +E + VLDGDLD F++A+L Sbjct: 300 VETFNTGAVLDGDLDQFIEASLKA 323 >gi|147732321|sp|Q68X96|RF2_RICTY RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 369 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 175/351 (49%), Positives = 243/351 (69%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L + D ++ RL+ L T DP LW N A++L+RE+ +++ ++ + Sbjct: 12 IEQSLELIWRSLDIESLTIRLTELEELTADPSLWNNNANAQILLREKTNIEEKLNVFNNL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L L +A E+D L + + +++ + + E L S E+D N+ +LE++ Sbjct: 72 KSNFEDILELEAMAEVENDFETLNQIEQDFKKLSIIAAKLETECLFSDESDYNNCFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA++++RMY R+AE+ FKT+ + + +GEE GIKS T+ I G AYGW K Sbjct: 132 AGAGGTESHDWASIMMRMYLRFAERLGFKTQIINMINGEEVGIKSCTIRIIGKRAYGWFK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+++ +R TSF+S WVYP +DD I I I + D RIDT+RASGAGGQH Sbjct: 192 TEAGVHRLVRISPFNAAGKRMTSFASSWVYPEIDDDIAITIEDKDLRIDTFRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPT V QCQ +RSQHKNKAQA ML+AKLY+LE+QKR + + ++ Sbjct: 252 VNTTDSAVRITHIPTNTVTQCQSDRSQHKNKAQAMKMLQAKLYKLEMQKRTDSVDKQNAN 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KT+ WG QIRSYVLQPYQ+VKDLRT+ E + VLDG+L++F+ A+LA+ Sbjct: 312 KTDNSWGHQIRSYVLQPYQIVKDLRTDYETSDTKGVLDGNLENFVSASLAM 362 >gi|254294252|ref|YP_003060275.1| hypothetical protein Hbal_1892 [Hirschia baltica ATCC 49814] gi|254042783|gb|ACT59578.1| hypothetical protein Hbal_1892 [Hirschia baltica ATCC 49814] Length = 370 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 195/352 (55%), Positives = 255/352 (72%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + + L DWD + +RL LN +EDP W + A+ LMRER + A+ I Sbjct: 11 KIQQSIELLRRRLDWDVSSKRLEELNALSEDPDFWNDAENAQKLMRERTKIVTAMDDITA 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ + D + E+A E D S+L++ ++++ + E + +LLSGE D ND ++E+ Sbjct: 71 LETEISDAEEMAEMAEMEGDDSLLEDIVESMKAALIRAERAELSALLSGEVDGNDCFVEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTESQDWANML RMY RWA K E L+ HDGEEAGIKSATL + G NAYGWL Sbjct: 131 NAGAGGTESQDWANMLRRMYVRWANAHGMKVEELDSHDGEEAGIKSATLKVSGENAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DSN++RHTSFSS+ V PV+DD+IE+EI + D R DTYRASG+GGQ Sbjct: 191 KSESGVHRLVRISPFDSNAKRHTSFSSVAVSPVLDDTIEVEIEDKDVRTDTYRASGSGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+N TDSA+R+TH PTG+VV CQ +RSQHKN+A AWNMLRA++YEL++++R E A Sbjct: 251 HINKTDSAIRLTHAPTGIVVACQSDRSQHKNRASAWNMLRARIYELKMRERAEAAQANAD 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +KT+IGWG QIRSYVLQPYQM+KDLRT +E + VLDGDLD F+ A+L+ Sbjct: 311 AKTDIGWGHQIRSYVLQPYQMIKDLRTGVETSDTKGVLDGDLDKFLAASLSA 362 >gi|110801299|ref|YP_696849.1| peptide chain release factor 2 [Clostridium perfringens ATCC 13124] Length = 362 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 157/350 (44%), Positives = 229/350 (65%), Gaps = 1/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L +G D + ++ + L K ++ W +V +A+ + +E + + + I K Sbjct: 12 ELKNNLKEMGASLDLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKN 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + +R+ D +L EL E D+ + + ++ + E++ + E++LSGE D NDA L + Sbjct: 72 LNERIDDVEVLKELMEENDEETAKE-IISEVKALSKEIDTLKIETILSGEYDRNDAILTL 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H G GG+++ DW MLLRMYTRW EK+ + E ++ G+EAG+KS TL +KG AYG+L Sbjct: 131 HTGVGGSDANDWTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+G+HRLVRISP+++N +R TSF+S+ V P + +IEI+ D RIDTYRA GAGGQ Sbjct: 191 KAEKGIHRLVRISPFNANGKRQTSFASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPTG+VVQCQ ERSQ N+ A ML++KL EL+ + +E Sbjct: 251 HVNKTESAVRITHIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++GWG QIRSYV PY MVKD RTN+E ++ + V+DGD+D+F+ A L Sbjct: 311 ELKDMGWGSQIRSYVFHPYSMVKDHRTNVETSNVNGVMDGDIDNFIIAYL 360 >gi|87200328|ref|YP_497585.1| peptide chain release factor 2 [Novosphingobium aromaticivorans DSM 12444] gi|87136009|gb|ABD26751.1| bacterial peptide chain release factor 2 (bRF-2) [Novosphingobium aromaticivorans DSM 12444] Length = 375 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 204/353 (57%), Positives = 262/353 (74%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ L + DWD AV+RL LN + EDP LW + +A+ +MRER+ L+ +I + + Sbjct: 11 RIEAALALVRKFLDWDRAVRRLDELNARVEDPKLWDDPKKAEEVMRERRRLEASIGTVNQ 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I + D + +EL E D + E L + + + ++LL+GEAD+N+A+LEV Sbjct: 71 IGQEMADAIEFVELGEMEGDEDTINEGLATLAALAERADNDKVQALLAGEADANNAFLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA ML RMYTRWAE+ +K E ++ H GE AGIKSATLLIKG NAYG+ Sbjct: 131 HAGAGGTESQDWAEMLQRMYTRWAERHGYKVELVDYHAGEAAGIKSATLLIKGENAYGYA 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS++RRHTSFSS+WVYP +DD+IE+EI+ +D +IDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPEIDDNIEVEINPADLKIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PTG++V Q +RSQHKN+A A ML+A++YE EL KRE A+ + Sbjct: 251 HVNTTDSAVRITHVPTGIIVASQNDRSQHKNRATAMGMLKARIYEAELAKREAAASGEYA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +KTEIGWG QIRSYVLQPYQ VKDLRT + T+P++VLDG LD FM A L+ + Sbjct: 311 AKTEIGWGHQIRSYVLQPYQQVKDLRTGVVSTNPTEVLDGALDPFMAAALSQR 363 >gi|126739118|ref|ZP_01754812.1| peptide chain release factor 2 [Roseobacter sp. SK209-2-6] gi|126719735|gb|EBA16443.1| peptide chain release factor 2 [Roseobacter sp. SK209-2-6] Length = 374 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 196/352 (55%), Positives = 252/352 (71%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L L +W+ A RL N + EDP+LW + A+ LMRERQ L +A+ K Sbjct: 11 EIEKSLELLAQRLNWETAEYRLEEFNARVEDPNLWDDPEAAQKLMRERQTLVDAMDTYKG 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L DN+ L+EL E+D ++ + + L+ ++ + K+ E+LL GEADSND +LE+ Sbjct: 71 IKQDLADNIELIELGEMEEDEEVVADAEEALKALQQKAAEKELEALLDGEADSNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTES DWA+ML RMY RWAEK+ +K E GEEAGIKSA I G NAYGWL Sbjct: 131 NSGAGGTESCDWASMLARMYVRWAEKKGYKVELQSETAGEEAGIKSAAYKISGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ +D RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPADIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL KR + N Sbjct: 251 HVNTTDSAVRITHNPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQIELDKRSALVNEVHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 S + GWG QIRSYVLQPYQMVKDLRT+ E + VLDGDLD FM ATLA+ Sbjct: 310 SAGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTKGVLDGDLDGFMAATLAL 361 >gi|325129251|gb|EGC52090.1| peptide chain release factor 2 [Neisseria meningitidis OX99.30304] gi|325133309|gb|EGC55975.1| peptide chain release factor 2 [Neisseria meningitidis M13399] gi|325205086|gb|ADZ00540.1| peptide chain release factor 2 [Neisseria meningitidis M01-240355] Length = 341 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 170/340 (50%), Positives = 237/340 (69%), Gaps = 1/340 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+ RL + +EDP LW + A+ + +ER+ L+ + + I + DN +L+ Sbjct: 1 MDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 60 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ AGAGGTE++DW Sbjct: 61 EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 120 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ E GVHRLVR Sbjct: 121 AGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 180 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAVRIT Sbjct: 181 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 240 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E K+++GWG QIR Sbjct: 241 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIR 300 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 SYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 301 SYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 339 >gi|254429259|ref|ZP_05042966.1| peptide chain release factor 2 [Alcanivorax sp. DG881] gi|196195428|gb|EDX90387.1| peptide chain release factor 2 [Alcanivorax sp. DG881] Length = 356 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 170/353 (48%), Positives = 232/353 (65%), Gaps = 8/353 (2%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 LGG+FD+D +RL+ + + E+P +W + A+ L +ER L+ ++ I + + Sbjct: 3 KRLGGIFDYDQKSERLTEVERELENPDVWNDPDYARALGKERAQLEMVVNTINDASQGVE 62 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D LL+L +EE D L E +L+ ++ V +F + SG+ D+ AYL++ AG+GG Sbjct: 63 DTSALLDLVVEEGDEDTLTEVESDLRDLEKMVADLEFRRMFSGQMDACSAYLDIQAGSGG 122 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDW M+LRMY RW E FKTE +E G+ AGIKSAT+ +G AYGWL+ E GV Sbjct: 123 TEAQDWGEMMLRMYLRWGEAHGFKTELVEASAGDVAGIKSATIRFEGEYAYGWLRTETGV 182 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS RRHTSFSS++V P VDD I+++I R+DTYRASGAGGQHVN TD Sbjct: 183 HRLVRKSPFDSGGRRHTSFSSVFVSPEVDDDIDVDIDVGSMRVDTYRASGAGGQHVNRTD 242 Query: 248 SAVRITHIPTGV-------VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 SAVR+T+ T V QCQ RSQH+NK QA M++AK+YE+E+Q+R + E Sbjct: 243 SAVRLTYEYTDEGGEKHTLVTQCQSGRSQHQNKDQALKMMQAKVYEVEMQRRNAEKQVQE 302 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 S+K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 303 SNKSDIGWGSQIRSYVLDD-GRIKDLRTGVESHNTQQVLDGALDQFIEASLKA 354 >gi|310822818|ref|YP_003955176.1| peptide chain release factor 2 [Stigmatella aurantiaca DW4/3-1] gi|309395890|gb|ADO73349.1| Peptide chain release factor 2 [Stigmatella aurantiaca DW4/3-1] Length = 380 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 157/341 (46%), Positives = 228/341 (66%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD D R+S ++ + P+ W + +A+ L++E+ L+ ++ + L D Sbjct: 27 GGIFDLDRKRSRISLIDRDSTLPNFWDDNTKAQALLKEKSTLEASVGAFDKALRGLDDAQ 86 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L+ELA E +D + QE L ++ ++ + +LSGE D ++ +++++AGAGGT+S Sbjct: 87 TLMELAREANDEASAQEAEGLLPTLEGDIAKLELARMLSGENDRSNCFMDINAGAGGTDS 146 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA ML+RMYTR+ E+R ++ E ++ GEEAG K+ +L I+G AYG+LK E GVHRL Sbjct: 147 MDWAAMLMRMYTRFCEERGWEVEISDMVAGEEAGFKNVSLHIRGEYAYGYLKAEVGVHRL 206 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+D+N+RR T+F+S+ VYP VDDSI I+I E D + R GAGGQ VN T S Sbjct: 207 VRISPFDANARRQTAFASVDVYPEVDDSIRIDIPEKDYELKFIRGGGAGGQKVNKTSSTA 266 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 ++ H+PT +++ CQ ERSQ NK A+ +LRA+LYELEL+KRE + E+ K +I +G Sbjct: 267 QLRHLPTNILITCQTERSQSANKDMAFKILRARLYELELKKREAERDAAEAQKKDISFGS 326 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVL PY+MVKDLRT +E + VLDGDL+ F+ A L Sbjct: 327 QIRSYVLAPYRMVKDLRTGVETGNVDAVLDGDLEQFVTAQL 367 >gi|119476451|ref|ZP_01616802.1| peptide chain release factor 2 [marine gamma proteobacterium HTCC2143] gi|119450315|gb|EAW31550.1| peptide chain release factor 2 [marine gamma proteobacterium HTCC2143] Length = 364 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 177/359 (49%), Positives = 250/359 (69%), Gaps = 8/359 (2%) Query: 2 KLSRQLNC-------LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN 54 +L+++L GG+FD+D ++L+ + + +P +W + A+ L ++R LD Sbjct: 5 RLNKRLKICLKGRKIFGGIFDYDIRKEQLTEVELELGEPAVWDDPGRAQELGKQRAALDI 64 Query: 55 AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114 +S I ++ + D LLE+A+EEDD + E + LQ + + +F + SGE D+ Sbjct: 65 VVSTIDKLTVGVSDVAELLEMAVEEDDADTVMEIENELQLLNQHLATLEFRRMFSGEMDA 124 Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 N+A+LE+ +G+GGTE+QDWA M+ RMY RW E + F TE +E DG+ AGIKSAT+ G Sbjct: 125 NNAFLEIQSGSGGTEAQDWAEMICRMYLRWGESKGFSTELMEASDGDVAGIKSATIRFSG 184 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 A+GWL+ E GVHRLVR SP+DS SRRHTSF+S++V P +D+ I+IEI+ SD R DTYR Sbjct: 185 EYAFGWLRTETGVHRLVRKSPFDSGSRRHTSFASVFVSPEIDEDIDIEINPSDLRTDTYR 244 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 ASGAGGQHVN TDSAVRITH P+G+VVQCQ +RSQH+N+ A L+AKLYE+E+ KR E Sbjct: 245 ASGAGGQHVNKTDSAVRITHEPSGIVVQCQSQRSQHQNRDFAMKQLKAKLYEMEMLKRNE 304 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 A E +K +IGWG QIRSYVL +KDLRT+++ ++ ++VLDGDLD F++A+L + Sbjct: 305 AAQAQEDNKADIGWGSQIRSYVLDDQ-RIKDLRTHVQTSNCNNVLDGDLDLFIEASLKM 362 >gi|291459037|ref|ZP_06598427.1| peptide chain release factor 2 [Oribacterium sp. oral taxon 078 str. F0262] gi|291418291|gb|EFE92010.1| peptide chain release factor 2 [Oribacterium sp. oral taxon 078 str. F0262] Length = 378 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 161/357 (45%), Positives = 226/357 (63%), Gaps = 3/357 (0%) Query: 2 KLSRQ---LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58 +LS + L LG D +N +R+ L+ E+P W + A L E HL N + Sbjct: 10 ELSTKAEPLEHLGASLDLENKRKRILELDRMMEEPDFWTDPERANRLSTENHHLKNELES 69 Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 + ++ D L+E+ +EE D S++ E + L +++ + LLSGE D+ +A Sbjct: 70 YQSLKQSYDDIGALIEMGVEEGDESVIPEIRELLSEFSEKLDSMSTQLLLSGEYDAMNAI 129 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 L ++AGAGGTE+ DWA ML RMYTRWAE+R F + L+ +GEEAGIKS T+ I G AY Sbjct: 130 LRLNAGAGGTEANDWAGMLYRMYTRWAERRGFGIKILDYLEGEEAGIKSVTMEIDGDYAY 189 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G+L+ E G+HRLVRISP+++ +R TSF S V P ++ I+++I E D +++ +R+SGA Sbjct: 190 GYLRSESGIHRLVRISPFNAQGKRQTSFVSCDVMPDIETDIDVDIREEDIKMEVFRSSGA 249 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQH+N T SAVR+ HIPTG VV CQ+ERSQ +N+ +A ML+AKLY E +++E Sbjct: 250 GGQHINKTSSAVRLIHIPTGFVVACQEERSQLQNRQKAMQMLKAKLYIKEKEEQEAKLAG 309 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + GWG QIRSYVLQPY+MVKDLRT E + VLDGD+D F+ A L + Sbjct: 310 IRGEVKDNGWGSQIRSYVLQPYRMVKDLRTGEETGNTDAVLDGDIDRFITAYLKWVQ 366 >gi|114764683|ref|ZP_01443868.1| peptide chain release factor 2 [Pelagibaca bermudensis HTCC2601] gi|114542883|gb|EAU45904.1| peptide chain release factor 2 [Roseovarius sp. HTCC2601] Length = 373 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 192/353 (54%), Positives = 245/353 (69%), Gaps = 2/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + L+ LG DW+ A RL N + EDP+LW + A+ LMR+RQ L +A+ Sbjct: 11 KIEKSLDLLGQRLDWETAPHRLEEFNARVEDPNLWDDPQAAQKLMRDRQFLVDAMETYTS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L DN+ L+EL E+D ++ E L+ + + K+ E+LL GEAD ND +LE+ Sbjct: 71 IKQELSDNVELIELGEMEEDDEVVSEAEGALKALAEKAGQKELEALLDGEADGNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTE+ DWA ML RMY RWAEKR ++ E G EAGIKS I G NAYGWL Sbjct: 131 NAGAGGTEACDWAAMLQRMYVRWAEKRGYEVELQSEEAGAEAGIKSVAYKISGTNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+ +R TSF+S+WVYPVVDD+IEI+++ SD R+DTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFGKGTR-ETSFASVWVYPVVDDNIEIDVNPSDIRVDTYRSSGAGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PTG+VV E+SQH+N+ A L+++LY++EL +R N Sbjct: 250 HVNTTDSAVRITHMPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAEINAQHE 308 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +K + GWG QIRSYVLQPYQMVKDLRT+ E + VLDGDLD FM ATLA K Sbjct: 309 AKGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTQGVLDGDLDPFMAATLAQK 361 >gi|325127235|gb|EGC50173.1| peptide chain release factor 2 [Neisseria meningitidis N1568] gi|325137398|gb|EGC59986.1| peptide chain release factor 2 [Neisseria meningitidis ES14902] gi|325141306|gb|EGC63796.1| peptide chain release factor 2 [Neisseria meningitidis 961-5945] gi|325199214|gb|ADY94670.1| peptide chain release factor 2 [Neisseria meningitidis G2136] gi|325203114|gb|ADY98568.1| peptide chain release factor 2 [Neisseria meningitidis M01-240149] Length = 341 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 170/340 (50%), Positives = 237/340 (69%), Gaps = 1/340 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+ RL + +EDP LW + A+ + +ER+ L+ + + I + DN +L+ Sbjct: 1 MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 60 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ AGAGGTE++DW Sbjct: 61 EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 120 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A ML RMY+R+AE++ FK E LE DGE AGI AT+ ++G AYG L+ E GVHRLVR Sbjct: 121 AGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 180 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAVRIT Sbjct: 181 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 240 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E K+++GWG QIR Sbjct: 241 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIR 300 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 SYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 301 SYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 339 >gi|160914511|ref|ZP_02076726.1| hypothetical protein EUBDOL_00517 [Eubacterium dolichum DSM 3991] gi|158433669|gb|EDP11958.1| hypothetical protein EUBDOL_00517 [Eubacterium dolichum DSM 3991] Length = 346 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 146/341 (42%), Positives = 209/341 (61%) Query: 12 GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 FD ++ L +T + W + A+ L+++ L + + +++ L Sbjct: 2 SRFDLAEKKHKIEELTARTMEESFWSDPQHAQTLIQQLNGLKDVVESYEQLDHALAGMEE 61 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L L ++ D I + ++ E + + LLS E D ++A LE+H GAGGTES Sbjct: 62 TLTLLKDDFDTEIFELLEMEYHEMEERFEQFELKMLLSHEYDHSNAILELHPGAGGTESC 121 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+ML RMY+RWAEK+ +K L+ G+EAGIKS T L++G AYG+LK E+GVHRLV Sbjct: 122 DWADMLYRMYSRWAEKKGYKVSVLDYLAGDEAGIKSITFLVEGDMAYGYLKAEKGVHRLV 181 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RISP+DS RRHTSF+S+ V P +D IEIEI D ++T RASGAGGQH+N TDSA+R Sbjct: 182 RISPFDSGGRRHTSFASLDVMPQFNDEIEIEIRPEDLIVETKRASGAGGQHINKTDSAIR 241 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 + H PTG+V CQ RSQH+N+ +A +L++++Y+ ++++E + + WG Q Sbjct: 242 MVHKPTGLVATCQNGRSQHENREEALRILKSRIYQKMIEEQEAKIAEIKGEQKANEWGSQ 301 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IRSYV PY MVKD RT E + V+DG+LD F+ A L Sbjct: 302 IRSYVFHPYSMVKDHRTGYETSDTQSVMDGNLDAFIFAYLK 342 >gi|108759158|ref|YP_632896.1| peptide chain release factor 2 [Myxococcus xanthus DK 1622] gi|108463038|gb|ABF88223.1| peptide chain release factor 2 [Myxococcus xanthus DK 1622] Length = 373 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 156/349 (44%), Positives = 229/349 (65%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ L G D D R++ + + P W + +A+ L++E+ L+ ++ ++ Sbjct: 12 LRERVLALRGHLDLDRKRSRIALIERDSTLPTFWDDNTKAQALLKEKSTLEASVGAYDKV 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D +L ELA+E +D + QE +L ++ +V + +LSGE D + +++++ Sbjct: 72 MRGLDDAQVLFELAVEANDEATTQEAEGSLTGLEGDVAKLELARMLSGEQDRSSCFMDIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGT+S DWA MLLRMYTR+ E + +K E + GEEAG K+ +L I+G AYG+LK Sbjct: 132 AGAGGTDSMDWAAMLLRMYTRYCENKGWKVEINDEVPGEEAGFKNVSLRIEGDFAYGYLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N+RR T+F+S+ VYP VDD+I+I+I E D + R GAGGQ Sbjct: 192 AEVGVHRLVRISPFDANARRQTAFASVDVYPEVDDTIQIDIPEKDIDLKFIRGGGAGGQK 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T S ++ H+PTG+++ CQ ERSQ NK A+ +LR +LYELE++KRE + E+ Sbjct: 252 VNKTSSTAQLRHLPTGIIITCQTERSQSANKDMAFKILRGRLYELEMKKREAARDAAEAQ 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K +I +G QIRSYVL PY+MVKDLRT IE + VLDGDL++F+ + L Sbjct: 312 KKDISFGSQIRSYVLAPYRMVKDLRTGIETGNVDAVLDGDLEEFVTSQL 360 >gi|325201177|gb|ADY96632.1| peptide chain release factor 2 [Neisseria meningitidis H44/76] Length = 341 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 169/340 (49%), Positives = 237/340 (69%), Gaps = 1/340 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+ RL + +EDP LW + A+ + +ER+ L+ + + I + DN +L+ Sbjct: 1 MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 60 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E+ +EE+D +++ ++ ++ +F+ + + AD N+ ++++ AGAGGTE++DW Sbjct: 61 EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 120 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A ML RMY+R+AE++ F+ E LE DGE AGI AT+ ++G AYG L+ E GVHRLVR Sbjct: 121 AGMLFRMYSRYAERKGFRIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 180 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAVRIT Sbjct: 181 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 240 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H PTG+VVQCQ +RSQH NKA A ML++KLYELE++KR E E K+++GWG QIR Sbjct: 241 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIR 300 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 SYVL +KDLRT E + VLDGDLD F++A+L Sbjct: 301 SYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 339 >gi|262198721|ref|YP_003269930.1| hypothetical protein Hoch_5555 [Haliangium ochraceum DSM 14365] gi|262082068|gb|ACY18037.1| conserved hypothetical protein [Haliangium ochraceum DSM 14365] Length = 378 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 164/353 (46%), Positives = 231/353 (65%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L LGG+FD D R+ L + + DP W N +A+ +RE + + + + + Sbjct: 22 ELENTLEELGGIFDVDEKRLRIEELESISADPAFWDNRQKAEDSLRELKSIKDVVGSYDK 81 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + +L D ++LLELA + +D E + I+ ++ +F +LSGE D A L++ Sbjct: 82 LSSKLADAVVLLELAEDAEDAESAIEARTAAEEIERSLDELEFRRMLSGEYDQGGAVLQI 141 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGG ++ DWA MLLRM R+A+ + +K E L+ EEAGIKSATL+I G AYG L Sbjct: 142 NSGAGGVDAADWAQMLLRMILRYADHKGWKAEVLDEQAAEEAGIKSATLVITGEYAYGLL 201 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+ +RR TSF+++ V P +DDS+ ++I E + RID YRA GAGGQ Sbjct: 202 KAEMGVHRLVRISPFDAQARRQTSFAAVTVSPDIDDSVHVDIDEGELRIDVYRAGGAGGQ 261 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITH+P+G+VVQCQ ERSQHKNKA A +LR++LY+ +R+ A Sbjct: 262 HVNKTESAVRITHLPSGIVVQCQNERSQHKNKASAMRVLRSRLYDYLKAERDAAAAEAAP 321 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K +I WG QIRSYVL PY+ V D RT+++ + VLDGDLD F++ L + Sbjct: 322 EKKKIEWGSQIRSYVLAPYRQVTDHRTDLKVGNVDAVLDGDLDPFIRTYLLSE 374 >gi|294677084|ref|YP_003577699.1| peptide chain release factor 2 [Rhodobacter capsulatus SB 1003] gi|294475904|gb|ADE85292.1| peptide chain release factor 2 [Rhodobacter capsulatus SB 1003] Length = 375 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 199/352 (56%), Positives = 239/352 (67%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L L D + A RL N E LW + A+ LMRERQ L + + + I Sbjct: 12 VRKTLRLLAQRMDLETAPHRLEEFNAMIEHGDLWSDPARAQKLMRERQMLMDKLETYRRI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN+ L+EL EDD I+ E +L+ +K K+ E+LL GEAD ND +LE++ Sbjct: 72 DRDLTDNIELIELGEMEDDPEIVAEAEKSLRALKELAAAKELEALLDGEADGNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMYTRWAEK+ + E G+EAGI+S I G NAYGWLK Sbjct: 132 AGAGGTESCDWASMLARMYTRWAEKKGYTVELQSETAGDEAGIRSVAYKISGQNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHR VRISPYDS +RRHTSFSS+WVYPVVDD+IEI+I SD RIDTYR+SGAGGQH Sbjct: 192 SESGVHRQVRISPYDSAARRHTSFSSVWVYPVVDDNIEIDIPASDIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT +VV +SQH+N+ A N LRA+LY++EL KR N + Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREAAMNALRARLYQMELDKRNAAINAQHEA 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K E GWG QIRSYVLQPYQMVKDLRT E + VLDGDLD FM ATLA+ Sbjct: 311 KGEAGWGNQIRSYVLQPYQMVKDLRTGHETSDTQGVLDGDLDAFMAATLAMD 362 >gi|225025532|ref|ZP_03714724.1| hypothetical protein EIKCOROL_02432 [Eikenella corrodens ATCC 23834] gi|224941678|gb|EEG22887.1| hypothetical protein EIKCOROL_02432 [Eikenella corrodens ATCC 23834] Length = 367 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 167/351 (47%), Positives = 238/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D+D RL + +EDP LW + A+ + +ER+ L+ + + I Sbjct: 16 LEKRSGEIRVYLDYDGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKVLEGIVLTLDNI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + DN +L+++ALEE D +++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 AGGIDDNRLLIDMALEEGDEDSFAAIEEDVAELEKQMAELEFKRMFNQPADVNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA MLLRMY R+ E++ FK E +E DGE AGI AT+ ++G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLLRMYVRYGERKGFKVEIMEQDDGEIAGINRATIRLEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSF+S++VYP VDDS E+EI+ +D R DT+RASGAGGQH Sbjct: 196 TETGVHRLVRHSPFDSNNKRHTSFASVFVYPEVDDSFEVEINPADVRTDTFRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVR+THIPTG+VVQ Q RSQH N+ MLRAKL+ELE++KR E E Sbjct: 256 INKTDSAVRMTHIPTGIVVQSQNSRSQHDNRRVCEEMLRAKLFELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K+++GWG QIRSYVL +KDLRT+ E + VLDGDLDDF++A+L Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTSHETGNTKAVLDGDLDDFIEASLKQ 365 >gi|330719765|gb|EGG98281.1| Peptide chain release factor [gamma proteobacterium IMCC2047] Length = 365 Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats. Identities = 179/352 (50%), Positives = 240/352 (68%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + L G D+ RL + + ED +W A+ L +ER L+N ++ I Sbjct: 13 ELQERTDVLRGYLDYAEKKDRLEEVERELEDSAVWDEPERAQALGKERSQLENIVATIDR 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D LL +A+EEDD + E S ++ + ++ +F + SGE D N A+L++ Sbjct: 73 LDSGISDGHELLAMAIEEDDEDTVNEVSAEIETLDAQLAKLEFRRMFSGEMDENSAFLDI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GGTE+QDWA MLLRMY RW E++ FK E +E+ G+ AGIK AT+ +G A+GWL Sbjct: 133 QAGSGGTEAQDWAEMLLRMYLRWGEQKGFKVELMEVSAGDVAGIKGATIKFEGEYAFGWL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS SRRHTSFS+++V P +DD++EI+I+ +D RIDTYRASGAGGQ Sbjct: 193 RTETGVHRLVRKSPFDSGSRRHTSFSAVFVSPEIDDNVEIDINPADLRIDTYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVRITH PT VVVQCQ +RSQH+NK A LRAKLYELE+QKR + A E Sbjct: 253 HVNKTDSAVRITHEPTNVVVQCQSQRSQHQNKDFAMKQLRAKLYELEMQKRNDAAQAQED 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K +IGWG QIRSYVL +KDLRTN+E ++ VLDG LD F++A+L Sbjct: 313 NKADIGWGSQIRSYVLD-SSRIKDLRTNVETSNTQAVLDGGLDMFIEASLKA 363 >gi|15888668|ref|NP_354349.1| peptide chain release factor 2 [Agrobacterium tumefaciens str. C58] gi|15156400|gb|AAK87134.1| peptide chain release factor 2 [Agrobacterium tumefaciens str. C58] Length = 342 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 231/328 (70%), Positives = 281/328 (85%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 N K EDP LW + EA+ LMRERQ LD++I+ +K ++ +L DN+ L+EL E D I++ Sbjct: 2 NNKAEDPTLWNDASEAQKLMRERQQLDDSINGVKALEQQLKDNIELIELGEMEGDDEIVK 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 + D L+ ++ E +Q E++LSGEADSND Y+EVH+GAGGTESQDWANMLLRMYTRWAE Sbjct: 62 DAEDALKALRSEANRRQVEAMLSGEADSNDTYVEVHSGAGGTESQDWANMLLRMYTRWAE 121 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 ++ FK E LEIHDG+EAGIKSAT+L+KG NA+GW+K E GVHRLVRISPYDSN+RRHTSF Sbjct: 122 RQGFKVEVLEIHDGDEAGIKSATILVKGHNAFGWMKTESGVHRLVRISPYDSNARRHTSF 181 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 SSIWVYPVVDDSI+I+I+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+ V CQQE Sbjct: 182 SSIWVYPVVDDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIAVACQQE 241 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQHKN+A+AW+MLRA+LYE+ELQKREE AN +SKT+IGWG QIRSYVLQPYQ+VKDL Sbjct: 242 RSQHKNRAKAWDMLRARLYEVELQKREEAANAQAASKTDIGWGHQIRSYVLQPYQLVKDL 301 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RT +E T+P +VLDGDL++FM+A LA + Sbjct: 302 RTGVESTAPGNVLDGDLNEFMEAALAHR 329 >gi|269836751|ref|YP_003318979.1| hypothetical protein Sthe_0720 [Sphaerobacter thermophilus DSM 20745] gi|269786014|gb|ACZ38157.1| conserved hypothetical protein [Sphaerobacter thermophilus DSM 20745] Length = 369 Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats. Identities = 157/347 (45%), Positives = 217/347 (62%), Gaps = 2/347 (0%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 +L+ +G D + + L ++ DP W + A+ +MR L N + E+ Sbjct: 15 ERLDRIGVRLDLPAKQREIEELEARSADPEFWNDGAGAQRVMRRLGALRNQVETWTELHQ 74 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 + D L++LA +DD VE + LLSG+ D +DA + +HAG Sbjct: 75 QAADLRELIDLAEADDDLRDEIAAETERV--LRGVEQLELNLLLSGQYDEHDAIMAIHAG 132 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 GG ++QDWA ML+RMY RWA R F+ + L++ +GEEAGIKSAT+ I+GP AYG+ KGE Sbjct: 133 TGGVDAQDWAEMLMRMYLRWASNRGFQAQVLDVTEGEEAGIKSATIEIRGPYAYGYTKGE 192 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G HRLVR+SP+D RRHT+F+ + V P V++ EI I + + RIDTYR+SGAGGQHVN Sbjct: 193 AGTHRLVRLSPFDQAHRRHTAFALVEVLPQVEEDTEIVIRDDEIRIDTYRSSGAGGQHVN 252 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TDSAVRITH+PTG+VV CQ ERSQ +N+ A +LRA+L EL ++KREE + Sbjct: 253 KTDSAVRITHLPTGIVVTCQNERSQIQNRETAMKILRARLTELAIRKREEEQAKLKGEHV 312 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +GWG +IRSYVLQPY MV D RT ++ V +G++D F++A L Sbjct: 313 AVGWGNRIRSYVLQPYTMVTDHRTEYSTSNVQAVFEGEIDPFIEAYL 359 >gi|219670742|ref|YP_002461177.1| hypothetical protein Dhaf_4746 [Desulfitobacterium hafniense DCB-2] gi|219541002|gb|ACL22741.1| hypothetical protein Dhaf_4746 [Desulfitobacterium hafniense DCB-2] Length = 368 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 162/350 (46%), Positives = 228/350 (65%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L L D ++S L + + P W N A+ +M+E + + + Sbjct: 12 LEVRLADLRVSLDVPQREDKISILEIELQRPDFWDNPEGAQKVMQELSYQQEKVKTYYTL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 Q +L D L L ++A+EE D S+ E + + ++ ++ + E LLSG D N+A + +H Sbjct: 72 QQQLDDMLTLYQMAVEEKDESLEPELEEGILALQQRLDGLELEILLSGPYDRNNAIVTLH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDW +ML RMY R+ E+ +K E ++ G+EAGIKSATL G NA+G+LK Sbjct: 132 AGAGGTEAQDWVSMLYRMYIRYGERHGYKVETMDFLPGDEAGIKSATLSFAGENAFGYLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241 E+GVHRLVRISP+D++ RRHTSF+S+ V P ++D+ EI+I D ++DTYRASGAGGQ Sbjct: 192 AEKGVHRLVRISPFDASGRRHTSFASVDVIPEVMEDNAEIQIPPEDLKVDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T SAVRITH+PTG+VVQ Q ERSQ +N+A +L+AKL EL+ +++E+ + Sbjct: 252 HVNKTSSAVRITHLPTGIVVQSQSERSQIQNRAYCLRILQAKLLELKRKQQEDEISEIRG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + EI WG QIRSYV PY MVKD RTN E + V+DG++D F+ A L Sbjct: 312 EQQEIAWGSQIRSYVFHPYNMVKDHRTNEETANTGAVMDGEIDQFIAAYL 361 >gi|139474158|ref|YP_001128874.1| peptide chain release factor 2 [Streptococcus pyogenes str. Manfredo] gi|166225116|sp|A2RFN2|RF2_STRPG RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|134272405|emb|CAM30661.1| peptide chain release factor 2 [Streptococcus pyogenes str. Manfredo] Length = 365 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 151/354 (42%), Positives = 219/354 (61%), Gaps = 2/354 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 ++ +L D D + ++ L +P W + I A+ +E L Sbjct: 11 VENKEKLTSFRRSLDLDRLEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFH 70 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 +Q+ + +LLE+ E+D + +E +NL ++ + + LLS D N+A LE Sbjct: 71 NMQELSDETELLLEMLDEDDS--LKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILE 128 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +H G+GGTE+QDW ++LLRMYTR+ FK E L+ G+EAGIKS TL +GPNAYG Sbjct: 129 IHPGSGGTEAQDWGDLLLRMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGL 188 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E GVHRLVRISP+DS RRHTSF+S+ V P +D++IE+E+ + D ++DT+R+ GAGG Sbjct: 189 LKSEMGVHRLVRISPFDSAKRRHTSFASVEVMPELDNTIEVEVRDDDIKMDTFRSGGAGG 248 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q+VN + VR+THIPTG+VV +R+Q+ N+ +A ML+AKLY+LE +K+ + + + Sbjct: 249 QNVNKVSTGVRLTHIPTGIVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALK 308 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K EI WG QIRSYV PY MVKD RTN E V+DG+++ F+ A L + Sbjct: 309 GDKKEITWGSQIRSYVFTPYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 362 >gi|328956713|ref|YP_004374099.1| peptide chain release factor 2 [Carnobacterium sp. 17-4] gi|328673037|gb|AEB29083.1| peptide chain release factor 2 [Carnobacterium sp. 17-4] Length = 351 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 178/345 (51%), Positives = 239/345 (69%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 +GGLFD + + ++ N + +P W + +A+ ++ E L + K++ + Sbjct: 1 MGGLFDLETLERDIAEYNDRMTEPTFWDDAQKAQAIINEANELKEKYNQYKDLLTEKEEL 60 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 +LLE+ EE+D +++E + +++ + E LLS D N+A +E+H GAGGTE Sbjct: 61 DLLLEMVKEENDEELVKELDSKINPFLDKLDQYELELLLSDPYDKNNAIIELHPGAGGTE 120 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 SQDW N+LLRMYTRWAEKR FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHR Sbjct: 121 SQDWGNLLLRMYTRWAEKRGFKIETLDYQSGDEAGIKSVTLLIKGMNAYGYLKAEKGVHR 180 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+DS RRHTSF SI V P +DDS++I+I+ D ++DTYRASGAGGQH+NTTDSA Sbjct: 181 LVRISPFDSAGRRHTSFVSIDVVPELDDSVDIKINSDDLKVDTYRASGAGGQHINTTDSA 240 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTGVVV Q +RSQ KN+ QA +ML+AKL++LE+++ E+ + EIGWG Sbjct: 241 VRITHMPTGVVVASQAQRSQLKNREQAMSMLKAKLHQLEVEEHEKEMAAIRGEQLEIGWG 300 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QIRSYV PY MVKD RTN E + S V+DG +D F++A L K Sbjct: 301 SQIRSYVFHPYSMVKDHRTNYETGNISQVMDGGIDPFIQAYLRSK 345 >gi|294055147|ref|YP_003548805.1| hypothetical protein Caka_1616 [Coraliomargarita akajimensis DSM 45221] gi|293614480|gb|ADE54635.1| hypothetical protein Caka_1616 [Coraliomargarita akajimensis DSM 45221] Length = 386 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 158/356 (44%), Positives = 220/356 (61%), Gaps = 4/356 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +++R+ + D ++ + L + +P W + A+ ++ E L A++ + Sbjct: 14 EITRRAGHIWRYLDGVKKLEEIEALEAQMAEPTFWDDQQAAQKVIAEANRLKAAVNPCRA 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDA 117 + D +LEL E + + +++ + S L+G DS +A Sbjct: 74 FNAEVDDLQAMLELVDEMGGDPDAAAYEQEVLDAVHALLPKLDALELASFLTGPHDSCNA 133 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 L +HAGAGGTES DWA+MLLRMYTRW E+ F + +I GEEAGI SAT+ I+GPNA Sbjct: 134 LLTIHAGAGGTESCDWADMLLRMYTRWGERAGFTVDIQDIMPGEEAGISSATIRIEGPNA 193 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 YG+ K E+GVHRLVRISP+DSN+RRHTSFSS+ V ++D I+++I ES+ R D YRASG Sbjct: 194 YGYAKAERGVHRLVRISPFDSNARRHTSFSSVDVIAEIEDDIDLDIPESEIRTDVYRASG 253 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQHVN T+SAVR+THIPT +VV CQ ERSQ KNKA A L+++LYE L ++ Sbjct: 254 KGGQHVNRTESAVRLTHIPTNLVVTCQNERSQIKNKATAMRTLKSRLYEKMLDEKRSEME 313 Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K +I WG QIRSYV QPYQ+V DLRT +++ + V+DG+LD F+ A L Sbjct: 314 KFYGEKGDIAWGNQIRSYVFQPYQLVTDLRTGLKEGNVQGVMDGELDPFVHAWLRA 369 >gi|288941013|ref|YP_003443253.1| peptide chain release factor 2 [Allochromatium vinosum DSM 180] gi|288896385|gb|ADC62221.1| peptide chain release factor 2 [Allochromatium vinosum DSM 180] Length = 349 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 184/342 (53%), Positives = 240/342 (70%), Gaps = 1/342 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+ RL+ + + EDP +W + A+ L RER L+ + I E+ L D Sbjct: 6 GGIFDYAERKDRLTEVLRELEDPTIWNDPGRAQALGRERATLEAVVLTIDELTGALADAD 65 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LL LA EE D + L+ +L+ + V +F + SGE D+ +A++++ AG+GGTE+ Sbjct: 66 DLLALAAEESDEATLESLVADLKSHEARVSELEFRRMFSGEMDACNAFVDIQAGSGGTEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMY RW E+R FKTE +E+ GE AGIKSAT+ +G A+GWL+ E GVHRL Sbjct: 126 QDWAEMLLRMYLRWGERRGFKTELMEVSAGEVAGIKSATVKFEGDYAFGWLRTEIGVHRL 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS +RRHTSFSS++V P VDDS+EIEI+ +D RID YRASGAGGQHVN T+SAV Sbjct: 186 VRKSPFDSGNRRHTSFSSVFVSPEVDDSVEIEINPADLRIDVYRASGAGGQHVNRTESAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PTG+VVQCQ +RSQHKNK QA L++KLYELE+QKR E +K++IGWG Sbjct: 246 RITHNPTGIVVQCQNDRSQHKNKDQAMKQLKSKLYELEMQKRRASQQALEETKSDIGWGS 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT +E + VLDG+LD F++A+L Sbjct: 306 QIRSYVLD-QSRIKDLRTGVEIANTQGVLDGNLDPFIQASLK 346 >gi|326387471|ref|ZP_08209080.1| peptide chain release factor 2 [Novosphingobium nitrogenifigens DSM 19370] gi|326208127|gb|EGD58935.1| peptide chain release factor 2 [Novosphingobium nitrogenifigens DSM 19370] Length = 375 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 205/353 (58%), Positives = 261/353 (73%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ L + DWD AV+RL L+ + EDP LW + +A+ +MRER+ LD AI +K+ Sbjct: 11 RIEGALALIRKFLDWDRAVRRLHELDARVEDPKLWDDPKQAEAVMRERRRLDAAIGTVKQ 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I + D + +EL E D + E L + + + ++LL+GEAD+N+A+LEV Sbjct: 71 IGQEMADAIEFVELGEMEGDEDTVAEGLATLAALAERADADKVQALLAGEADANNAFLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA ML RMYTRWAE+ +K E ++ H GE AGIK TLLIKG NAYG+ Sbjct: 131 HAGAGGTESQDWAEMLQRMYTRWAERHGYKVELVDYHAGEAAGIKGCTLLIKGENAYGYA 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS++RRHTSFSS+WVYP +DD+I+IEI+ +D ++DTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPEIDDNIDIEINPADLKVDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PTG++V Q +RSQHKN+A A MLRA+LYE EL KRE A+ + Sbjct: 251 HVNTTDSAVRITHVPTGIIVASQNDRSQHKNRATAMGMLRARLYEAELAKREAAASGEYA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +KTEIGWG QIRSYVLQPYQ VKDLRT + T+P++VLDG LD FM A L+ + Sbjct: 311 AKTEIGWGHQIRSYVLQPYQQVKDLRTGVVSTNPTEVLDGALDPFMAAALSQR 363 >gi|15672953|ref|NP_267127.1| peptide chain release factor 2 [Lactococcus lactis subsp. lactis Il1403] gi|281491474|ref|YP_003353454.1| peptide chain release factor 2 [Lactococcus lactis subsp. lactis KF147] gi|24638157|sp|Q9CGX1|RF2_LACLA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|12723911|gb|AAK05069.1|AE006331_9 peptide chain release factor 2 [Lactococcus lactis subsp. lactis Il1403] gi|281375192|gb|ADA64705.1| Peptide chain release factor 2 (RF-2) [Lactococcus lactis subsp. lactis KF147] gi|326406515|gb|ADZ63586.1| peptide chain release factor RF-2 [Lactococcus lactis subsp. lactis CV56] Length = 365 Score = 270 bits (690), Expect = 2e-70, Method: Composition-based stats. Identities = 148/350 (42%), Positives = 221/350 (63%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + ++N D + + ++ L P W + A+ ++ E L + + Sbjct: 14 AEKINGFRESLDLERLEEEIALLENDMAQPEFWNDQAAAQKVIDESNALKAKYDNYQAMN 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + L + +LE+ EE D + E + + ++E + E +L+ D +A LE+H Sbjct: 74 NMLEEAQTMLEMLQEEADEEMQAELEEMTIALGQKIESYELEIMLNQPYDHMNAVLEIHP 133 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTESQDW +ML+RMYTRW E FK E L+ DG+ AG+KS L G NAYG+L+G Sbjct: 134 GSGGTESQDWGSMLMRMYTRWGEAHGFKVEILDYQDGDVAGLKSVALRFVGRNAYGFLRG 193 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+DS +RRHTSF+S+ V P +DDSIE+++ ++D ++DT+R+ GAGGQ+V Sbjct: 194 EKGVHRLVRISPFDSANRRHTSFTSVDVMPELDDSIEVDVRDADVKMDTFRSGGAGGQNV 253 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N + VR+THIPTG+VVQ +R+Q+ N+ +A ML++KLY+LE+ K++ + + Sbjct: 254 NKVSTGVRLTHIPTGIVVQSTMDRTQYGNRDKAMAMLKSKLYQLEMDKKQAEVDELRGDQ 313 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +EI WG QIRSYV PYQ+VKD RT E S+V+DG+LD F+ A L Sbjct: 314 SEISWGSQIRSYVFMPYQLVKDTRTGYETGQISNVMDGELDGFINAYLRW 363 >gi|229827336|ref|ZP_04453405.1| hypothetical protein GCWU000182_02724 [Abiotrophia defectiva ATCC 49176] gi|229788274|gb|EEP24388.1| hypothetical protein GCWU000182_02724 [Abiotrophia defectiva ATCC 49176] Length = 340 Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats. Identities = 169/333 (50%), Positives = 219/333 (65%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL LN +P W N +A M E L N I E+Q D L+E+A EE+D Sbjct: 2 RLEELNRLISEPGFWDNADKANATMAEISSLKNGIESFDELQTMYDDIGALIEMAEEEND 61 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 S++ E D L+R K E + + +LLSG D ++A + +HAGAGGTE+ DW +L+R Y Sbjct: 62 SSMVSEIGDELERFKTEFDTLRISTLLSGPYDKDNAIITLHAGAGGTEACDWTGILMRAY 121 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 TRWA+ + FKTE ++ GEEAG+KS T+ I G NAYG+LK E GVHRLVRISP+++ + Sbjct: 122 TRWADSKGFKTEVIDYLAGEEAGVKSCTIEITGTNAYGYLKSEHGVHRLVRISPFNAAGK 181 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 R TSF S V P +++ I+IEI + D RIDT+RASGAGGQH+N T SA+RITH P+G+VV Sbjct: 182 RQTSFVSCDVMPDIEEDIDIEIKDEDMRIDTFRASGAGGQHINKTSSAIRITHFPSGIVV 241 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 CQ ERSQ +NKA+A ML+AKLY L Q+ E + +I WG QIRSYVLQPY Sbjct: 242 SCQNERSQFQNKAKAMQMLKAKLYMLRQQENEAKEAGIRGEQKDIAWGSQIRSYVLQPYT 301 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 MVKD RTN+E + VLDG+ D F+ A L K Sbjct: 302 MVKDHRTNVEIGNAQTVLDGNFDPFINAYLKWK 334 >gi|332974657|gb|EGK11574.1| peptide chain release factor RF2 [Kingella kingae ATCC 23330] Length = 367 Score = 270 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 169/351 (48%), Positives = 241/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+++ + + D+ RL + +EDP LW + A+ + +ER+ L+ + + +I Sbjct: 16 LAKRNDDIRVYMDYQGKKDRLEEVVGLSEDPDLWNDPKRAQDIGKERKLLEGVVLTLDKI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + DN L+++ +EE D ++ ++ ++ +F+ + + AD N+ ++++ Sbjct: 76 TNGIDDNRELIDMVVEEGDADGFAAIIADVAELEKQMADLEFKRMFNQPADPNNCFIDIT 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE++DWA MLLRMYTR+AE++ FK E +E DGE AGI +ATL I+G AYG L+ Sbjct: 136 AGAGGTEAEDWAGMLLRMYTRYAERKGFKVEVIEQDDGEIAGINNATLRIEGEYAYGLLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DSN++RHTSFSS++VYP VDDS E+EI+ +D R DTYRASGAGGQH Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFSSVFVYPEVDDSFEVEINPADLRTDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITHIPTG+VVQ Q RSQH+N+ MLR+KL+ELE++KR E E Sbjct: 256 INKTDSAVRITHIPTGIVVQSQSSRSQHENRRIVMEMLRSKLFELEMRKRNEEKQALEEG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K+++GWG QIRSYVL +KDLRT+ E + VLDGDLD F++A+L Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTSYEVGNTKAVLDGDLDGFIEASLKQ 365 >gi|332185456|ref|ZP_08387204.1| peptide chain release factor 2 [Sphingomonas sp. S17] gi|332014434|gb|EGI56491.1| peptide chain release factor 2 [Sphingomonas sp. S17] Length = 375 Score = 270 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 215/352 (61%), Positives = 274/352 (77%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++ L L DWD A++RL LN + ED LW + +A+ +MRER+ LD AI+ + I Sbjct: 12 INDALALLRRFLDWDRALRRLDELNARVEDQALWNDPKQAQAVMRERRRLDEAITATRAI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L + L+ELA E D + +E +L + E + ++LL+GEAD+ND+Y+E++ Sbjct: 72 ENELSGTVELIELAEMEGDEELEKEAVTSLGDLAKRAEADKVKALLAGEADANDSYIEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTESQDWA ML RMYTRWAE+R K E ++ H GE+AGIKSATLL+KG NAYG+ K Sbjct: 132 AGAGGTESQDWAGMLQRMYTRWAERRGMKVELIDYHAGEQAGIKSATLLVKGENAYGYAK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS+WVYPV+DD+IE+EI+ES+ RIDTYRASGAGGQH Sbjct: 192 VESGVHRLVRISPYDSAARRHTSFSSVWVYPVIDDNIEVEINESELRIDTYRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +NTTDSAVRITH+PTG+VVQCQ +RSQHKNKA+A+N LRA+LYE EL +RE +AN ++ Sbjct: 252 INTTDSAVRITHLPTGIVVQCQNQRSQHKNKAEAYNQLRARLYERELAEREAVANAENAT 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT+IGWG QIRSYVLQPYQ+VKDLRT + T+P DVLDGDLD FM A L+ + Sbjct: 312 KTDIGWGHQIRSYVLQPYQLVKDLRTGVTSTAPGDVLDGDLDAFMAAALSQR 363 >gi|325981471|ref|YP_004293873.1| hypothetical protein NAL212_0774 [Nitrosomonas sp. AL212] gi|325530990|gb|ADZ25711.1| hypothetical protein NAL212_0774 [Nitrosomonas sp. AL212] Length = 368 Score = 270 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 173/351 (49%), Positives = 241/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + L D+D+ RL+ L ED +W + + + RE++ L++ + + + Sbjct: 16 LDSRASELRRFLDFDSKQTRLNELTRLLEDSTVWSDSKRTQEIGREKKSLEDTVVTLVSM 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + +L D L ++A +E D + L S + + I+ + +F + SG DSN+ ++++ Sbjct: 76 EKQLGDAKELFQIAKDEADEAALVSISLDAENIEKAIANLEFRRMFSGPMDSNNCFVDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +G+GGTE+QDWA ML RMY R+ E++ F E LE G+ AGIKSATL I G AYG+L+ Sbjct: 136 SGSGGTEAQDWAAMLERMYLRYCERQGFDVEILEESPGDIAGIKSATLKISGEYAYGFLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSFSS++VYP VDDSIEIEI+ +D RIDT+RASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSGNRRHTSFSSVFVYPEVDDSIEIEINPADLRIDTFRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSA+RITH PTG+VVQCQ RSQH+NKA A ML+++L+E EL+KR E E + Sbjct: 256 INKTDSAIRITHNPTGIVVQCQSGRSQHRNKADALTMLKSRLFEAELRKRNEEKQAIEEN 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KT+IGWG QIRSYVL +KDLRTN+E + +VLDGDL+ F++A+L Sbjct: 316 KTDIGWGHQIRSYVLD-QSRIKDLRTNVEVGNTQNVLDGDLNSFIEASLKQ 365 >gi|320355124|ref|YP_004196463.1| peptide chain release factor 2 (bRF-2) [Desulfobulbus propionicus DSM 2032] gi|320123626|gb|ADW19172.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfobulbus propionicus DSM 2032] Length = 369 Score = 270 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 177/352 (50%), Positives = 238/352 (67%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ L D D +++ L +T P+ W N EAK + R+ L + I ++ Sbjct: 17 LKGKMLVLKEHLDLDGKREQVELLERQTVSPNFWDNQSEAKRVQRQLGQLQDLIGVWEKN 76 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D +LL++A EE+D QE L ++ VE + E + SGE D+N+A L +H Sbjct: 77 FGDLEDAEMLLDMAREENDQDTYQEVVSGLDDLRRRVELVELECMFSGEHDANNAILTIH 136 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDW +LLRMY RWAE + FK + L++ G+EAG KS T+++KG AYG+L+ Sbjct: 137 AGAGGTEAQDWVGILLRMYLRWAESKGFKADILDLLPGDEAGTKSVTIMVKGKYAYGYLR 196 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVRISP+D++ RRHTSF+S+ V P +DD +EIEI++ D RIDTYRASG+GGQH Sbjct: 197 SEVGIHRLVRISPFDASGRRHTSFASVMVMPELDDDVEIEINDKDIRIDTYRASGSGGQH 256 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSA+RITH PTG+VVQCQ ERSQH NKA A ML A+LYE E ++++ + Sbjct: 257 VNKTDSAIRITHFPTGIVVQCQNERSQHSNKATAMKMLMARLYEREKEEQQRTQENIQGD 316 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K EI WG QIRSYVLQPY+++KD RTN E+ + VLDG LD F+KA L + Sbjct: 317 KKEIAWGSQIRSYVLQPYRLIKDHRTNTEEGNVDAVLDGRLDPFIKAYLLWQ 368 >gi|284008432|emb|CBA74885.1| peptide chain release factor 2 [Arsenophonus nasoniae] Length = 332 Score = 270 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 176/330 (53%), Positives = 229/330 (69%), Gaps = 1/330 (0%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 +N + E P +W A+ L +ER L+ + I + L D LL+LA+E DD Sbjct: 2 EEVNAELEQPDVWNEPERAQALGKERSSLEAIVETIDALIQGLDDVSGLLDLAIEADDED 61 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 E L +++ ++ +F + SG+ DS + YL++ AG+GGTE+QDWA+ML+RMY R Sbjct: 62 TFHEAVAELAQLEGKLGQLEFRRMFSGQYDSANCYLDLQAGSGGTEAQDWASMLMRMYLR 121 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 WAE + FKTE +E DG+ AG+KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRH Sbjct: 122 WAESKGFKTEIIEASDGDVAGLKSATIKIIGEYAYGWLRTETGVHRLVRKSPFDSGGRRH 181 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TSFSS ++YP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPTG+V QC Sbjct: 182 TSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTGIVTQC 241 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 Q +RSQHKNK QA+ L+AKLYELE+QK+ E +K++IGWG QIRSYVL + Sbjct: 242 QNDRSQHKNKDQAFKQLKAKLYELEMQKKNADKQALEENKSDIGWGSQIRSYVLDD-SRI 300 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KDLRT +E + VLDGDLD F++A+L Sbjct: 301 KDLRTGVENRNTQAVLDGDLDKFIEASLKA 330 >gi|300174043|ref|YP_003773209.1| peptide chain release factor 2 [Leuconostoc gasicomitatum LMG 18811] gi|299888422|emb|CBL92390.1| Peptide chain release factor 2 [Leuconostoc gasicomitatum LMG 18811] Length = 372 Score = 270 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 147/353 (41%), Positives = 213/353 (60%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + D + + ++ + + W + ++A+ ++ E L N + Sbjct: 13 IQENIARFRATLDLEALTEEIADFENRMTESGFWDDNVKAQKIIEENNVLKNRRDSFLNL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEV 121 + + +L+E+ E+ S + + + ++E E LL+ D+N+A LEV Sbjct: 73 TSQAEEIDLLIEMLSEDVTDSEMMSELEESIVKAQKDIETYNLEQLLTEPYDANNAILEV 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H G+GGTES DW L RMYTRWA++ F+ + L+ H G+EAGI SAT+ I G NA+G+L Sbjct: 133 HPGSGGTESTDWGANLYRMYTRWAQQHGFQVDVLDYHAGDEAGIDSATIKITGHNAFGFL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E+GVHR VRISP+DS RRHTSF S+ V P +DD+I+IEI + D ++D +R+ GAGGQ Sbjct: 193 RSEKGVHRFVRISPFDSAGRRHTSFVSVDVMPELDDTIDIEIRDDDVKMDVFRSGGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN + VR+TH PTG+VV ER+Q+ N+ A +L+ KLY+LEL+K+E Sbjct: 253 NVNKVSTGVRLTHEPTGIVVSSTVERTQYGNRDYAMRLLKGKLYQLELEKQEAERAALTG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K E GWG QIRSYVL PYQMVKD RT+ E P VLDGDLD F+ A L + Sbjct: 313 DKLENGWGSQIRSYVLHPYQMVKDHRTDYETNQPQQVLDGDLDPFINAYLQWQ 365 >gi|254461473|ref|ZP_05074889.1| peptide chain release factor 2 [Rhodobacterales bacterium HTCC2083] gi|206678062|gb|EDZ42549.1| peptide chain release factor 2 [Rhodobacteraceae bacterium HTCC2083] Length = 375 Score = 270 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 197/352 (55%), Positives = 246/352 (69%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L L DWD A RL N + EDP LW + A+ LM+ERQ L +A+ Sbjct: 11 EIEKSLELLRQRLDWDTAEFRLEEFNARVEDPDLWNDPDAAQKLMQERQALVDAMGTYTS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L D + ++EL E+D ++ E + L + K+ E+LL GEADSND +LE+ Sbjct: 71 IKQELSDQVEMIELGEMEEDEDVVTEAEEALNALAKLAAAKELEALLDGEADSNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTES DWA+ML RMY RWAEKR +K E GEEAGIKSA I G NAYGWL Sbjct: 131 NSGAGGTESCDWASMLARMYVRWAEKRGYKVELQSESAGEEAGIKSAAYKISGQNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL KR + N Sbjct: 251 HVNTTDSAVRITHAPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQIELDKRSALVNEAHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + + GWG QIRSYVLQPYQMVKDLRTN E + VLDGDLD FM ATLA+ Sbjct: 310 NAGDAGWGNQIRSYVLQPYQMVKDLRTNHETSDTKGVLDGDLDGFMGATLAM 361 >gi|84502908|ref|ZP_01001021.1| peptide chain release factor 2 [Oceanicola batsensis HTCC2597] gi|84388891|gb|EAQ01761.1| peptide chain release factor 2 [Oceanicola batsensis HTCC2597] Length = 374 Score = 270 bits (689), Expect = 3e-70, Method: Composition-based stats. Identities = 190/352 (53%), Positives = 242/352 (68%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L L +W+ A RL N + EDP+LW + +A+ LM++RQ L ++I+ I Sbjct: 12 IEKSLELLRQRMNWETAQHRLEEFNARVEDPNLWDDPEKAQALMKDRQALVDSIAVHDSI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L DN L+EL EDD ++ E L+ +K K+ E+LL+GEADSND +LE++ Sbjct: 72 RQELSDNAELIELGEMEDDQEVVAEAETALRALKERAAEKELEALLNGEADSNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA ML RMY RWAEKR +K E G EAGIKS I G NAYGWLK Sbjct: 132 AGAGGTEACDWAQMLQRMYVRWAEKRGYKVELQSEEPGAEAGIKSCAYKITGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+ +R TSF+S+WVYPVVDD+I+I+++ +D RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPFGKGTR-ETSFASVWVYPVVDDNIDIDVNPADIRIDTYRSSGAGGQH 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY+LEL +R N + Sbjct: 251 VNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQLELDRRNAAINEAHEN 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K GWG QIRSYVLQPYQMVKDLRT E + VLDG+LD FM ATLA+ Sbjct: 310 KGSAGWGNQIRSYVLQPYQMVKDLRTEHETSDTQGVLDGNLDGFMAATLAMD 361 >gi|296283820|ref|ZP_06861818.1| peptide chain release factor 2 [Citromicrobium bathyomarinum JL354] Length = 375 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 207/353 (58%), Positives = 263/353 (74%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ L + DW+ A++ L LN + EDP LW + +A+ +MRE++ L++AI + Sbjct: 11 RIEAALALVRQSLDWERALRELDELNARVEDPTLWDDPKQAQAIMREQKRLESAIGTVNT 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I + D + +E+ E D I+ E +L+++ + + ++LLSGEAD+NDAYLEV Sbjct: 71 ISSEMADAIEFVEMGEAEGDDDIVNEGLTSLEKLAARADADKVQALLSGEADANDAYLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA ML+RMY RWAEKR FK E +E GE+AGIKS TL IKG NAYG+ Sbjct: 131 HAGAGGTESQDWAEMLMRMYVRWAEKRGFKVETVEYQSGEQAGIKSVTLHIKGENAYGYA 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD IEIEI+ESD +IDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDDIEIEINESDLKIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV Q +RSQHKN+A A +ML+A+L+E E+ +RE A+ + Sbjct: 251 HVNTTDSAVRITHQPTGIVVASQNDRSQHKNRATAMSMLKARLFEREMAEREAAASGEYA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KTEIGWG QIRSYVLQPYQ+VKDLRT T+P DVLDG +D F+ A LA + Sbjct: 311 EKTEIGWGHQIRSYVLQPYQLVKDLRTGETSTAPGDVLDGAIDPFISAALAQR 363 >gi|116333278|ref|YP_794805.1| protein chain release factor B [Lactobacillus brevis ATCC 367] gi|116098625|gb|ABJ63774.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus brevis ATCC 367] Length = 343 Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats. Identities = 158/328 (48%), Positives = 212/328 (64%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 + P W + A++L+ E + + + + ++ D ++ LEL EE D + Sbjct: 9 EGQMAQPDFWDDAQAAQLLIDETNEMKKKVDEFQRLVTQVEDLMVALELLQEEPDAEMQA 68 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E + + + + LL+ + D N+A LE+H GAGGTESQDW +MLLRMYTRWAE Sbjct: 69 EFETDFATAQAALRQYRLNLLLNQKYDHNNALLEIHPGAGGTESQDWGDMLLRMYTRWAE 128 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + FK L+ G+ AG+ S TL I G NAYG+L+ E+GVHRLVRISP+DS RRHTSF Sbjct: 129 QHDFKVTVLDYQPGDVAGLSSVTLAIAGRNAYGYLRSEKGVHRLVRISPFDSAGRRHTSF 188 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S+ V P +DDS++I+I+ ++ ++D YRASGAGGQHVN T SAVRITHIPTG+V Q Q + Sbjct: 189 ASVDVLPELDDSVDIDINPAELKVDVYRASGAGGQHVNKTSSAVRITHIPTGIVTQSQAQ 248 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQ +N+ A MLRAKLYE +K+ + E + EIGWG QIRSYV PY MVKD Sbjct: 249 RSQLQNRQTALAMLRAKLYERAEEKKAQEKAALEGDQMEIGWGSQIRSYVFHPYTMVKDH 308 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RTN E + V+DGDLD F+ A L + Sbjct: 309 RTNYETGNGQAVMDGDLDPFIDAFLQWQ 336 >gi|289549137|ref|YP_003474125.1| peptide chain release factor 2 [Thermocrinis albus DSM 14484] gi|289182754|gb|ADC89998.1| peptide chain release factor 2 [Thermocrinis albus DSM 14484] Length = 372 Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats. Identities = 173/353 (49%), Positives = 238/353 (67%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ + + D+ + L L+ H+W +AK +++ R+ L+ I ++ Sbjct: 11 ELTERFEEVKESLKLDSMKEELKELDNLMASSHIWNQQEKAKKILQRRKWLEENIQQLEA 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L D LL + EED + L++ + ++ + + LSGE D+ +AYL + Sbjct: 71 TEKVLSDIRELLHITEEEDLETQTLLKE-ELEKAEQMIKDMEIRAFLSGEMDAKNAYLTI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG E+ DWA MLLRMY RWAEK ++ E ++I + AGIKSATLLIKGP AYG+L Sbjct: 130 QAGAGGVEACDWAQMLLRMYRRWAEKHGYEVEVVDITPDDVAGIKSATLLIKGPYAYGYL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE GVHRLVRISP+D+N+RRHTSF+S+ V P +D+SI IEI E D ++T+RASGAGGQ Sbjct: 190 KGESGVHRLVRISPFDANARRHTSFASVTVVPQIDESINIEIREEDIEMETFRASGAGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN TD+AVRI H PTG+VV CQQERSQ++N+ +A +L+AKLY+L+LQ+ EE E Sbjct: 250 YVNKTDTAVRIRHKPTGIVVTCQQERSQYQNRMKALELLKAKLYQLKLQELEEKKRALEG 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KTEIGWG QIRSYV QPYQ+VKDLRT +E V+DG++D F++A L K Sbjct: 310 EKTEIGWGHQIRSYVFQPYQLVKDLRTGVEIGDVESVMDGEIDPFIEAYLRWK 362 >gi|281357586|ref|ZP_06244073.1| peptide chain release factor 2 [Victivallis vadensis ATCC BAA-548] gi|281315843|gb|EFA99869.1| peptide chain release factor 2 [Victivallis vadensis ATCC BAA-548] Length = 364 Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats. Identities = 180/354 (50%), Positives = 240/354 (67%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++ L ++ ++ L K P W N A+ + + N + ++ Sbjct: 13 ELKGRIGHLEEFLHIEDRKAEMAELEQKMSAPDFWDNKESAQNTVAQLSACRNLLEPFRK 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +Q + D +ELA E+++ T + +R+ ++ + S LSG+ D ++ Y V Sbjct: 73 LQSEVEDYSASVELAAEDEEFLQE--TEISYRRLLKSLDRMEIMSFLSGKFDRSNLYFSV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTES DWANMLLRMY R+ E+R +K E +++ GEEAG+KSATL + G AYG++ Sbjct: 131 HAGAGGTESCDWANMLLRMYRRYFERRGWKDEVIDLQPGEEAGVKSATLHVTGEFAYGYM 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE+GVHRLVRISP+DSN+RRHTSF S+ V+P +DD IEIEI ES RIDTYR+SGAGGQ Sbjct: 191 KGEKGVHRLVRISPFDSNARRHTSFVSVDVFPELDDDIEIEIDESQLRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSA+RITH+PTG+VV CQ ERSQHKN+A A ML+AKLYE E +KR A+ Sbjct: 251 HVNTTDSAIRITHLPTGIVVCCQNERSQHKNRATAMKMLKAKLYEFEEEKRRNEADAIRG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K E GWG QIRSYVLQPYQMVKDLRT +E + + VLDGD+D+F++A L + Sbjct: 311 EKAENGWGSQIRSYVLQPYQMVKDLRTEVETSDTAGVLDGDIDEFIEAYLKSAR 364 >gi|109897685|ref|YP_660940.1| peptide chain release factor 2 [Pseudoalteromonas atlantica T6c] gi|109699966|gb|ABG39886.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudoalteromonas atlantica T6c] Length = 348 Score = 269 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 184/346 (53%), Positives = 239/346 (69%), Gaps = 1/346 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 ++ GG FD+D +RL +N + E P +W A+ L +E+ L+ + I ++ Sbjct: 1 MHRFGGTFDYDQKNERLEEVNRELESPDVWNEPERAQALGKEKVALEQVVETIVFLEQGC 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 + LLELA+EE D L E +L + +E +F + SG D+ND Y+++ +G+G Sbjct: 61 VEVEELLELAVEESDQETLDEAEKDLAELVSRLETLEFRRMFSGPNDANDGYIDIQSGSG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWA+MLLRMY RW E FKTE +E+ DG+ AGIKSAT+ +G A+GWL+ E G Sbjct: 121 GTEAQDWASMLLRMYLRWGEAHGFKTELIEVSDGDVAGIKSATIRFEGEYAFGWLRTETG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR SP+DS SRRHTSF+S++ YP +DD IEI+I SD RIDTYRASGAGGQHVN T Sbjct: 181 VHRLVRKSPFDSGSRRHTSFASVFAYPEIDDDIEIDIDPSDLRIDTYRASGAGGQHVNRT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH PT +VVQCQ +RSQHKNKAQA L+AKLYE E+QK+ E E SK++I Sbjct: 241 DSAVRITHEPTNIVVQCQNDRSQHKNKAQAMKQLKAKLYEFEMQKQNEEKQTMEDSKSDI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 GWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 301 GWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIQASLK 345 >gi|284040585|ref|YP_003390515.1| hypothetical protein Slin_5751 [Spirosoma linguale DSM 74] gi|283819878|gb|ADB41716.1| hypothetical protein Slin_5751 [Spirosoma linguale DSM 74] Length = 358 Score = 269 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 155/349 (44%), Positives = 225/349 (64%), Gaps = 3/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ L G D+DN ++L+ L +T P W + A+ +M++ + L + +++ Sbjct: 9 LRARVEALRGYLDYDNKKEQLAELEQQTFQPEFWTDAARAEGVMKQVRGLKGWTTGYEKL 68 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L E D + +E + + +L E D A LE++ Sbjct: 69 NSQFGDLETLFEFYEAGDVTEEEVDEEGRKVTT--TLEELELKKMLGNEEDQLSAVLEIN 126 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTESQDWA+ML RMY RWAEK + + ++ +G+ AGIKSAT+ + GP AYG+LK Sbjct: 127 AGAGGTESQDWADMLYRMYMRWAEKHGYGLKQVDYQEGDTAGIKSATIEVDGPLAYGFLK 186 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DSN+RRHTSF+S++ YP++DD+I IE++ +D DT+R+ GAGGQ+ Sbjct: 187 SENGVHRLVRISPFDSNARRHTSFASVYAYPLIDDTINIEVNPADIDWDTFRSGGAGGQN 246 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++AVR+ H P+G++++CQQERSQ +NK A +L++KLYE+E+QKR E+S Sbjct: 247 VNKVETAVRLKHKPSGLIIECQQERSQLQNKEVAIRLLKSKLYEIEVQKRNAARAEVEAS 306 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K +I WG QIRSYVL + VKD RT + ++ VLDGDLD F+KA L Sbjct: 307 KQKIEWGSQIRSYVLDD-RRVKDHRTGYQTSNTEAVLDGDLDPFIKAFL 354 >gi|225387178|ref|ZP_03756942.1| hypothetical protein CLOSTASPAR_00930 [Clostridium asparagiforme DSM 15981] gi|225046726|gb|EEG56972.1| hypothetical protein CLOSTASPAR_00930 [Clostridium asparagiforme DSM 15981] Length = 338 Score = 269 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 153/324 (47%), Positives = 217/324 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E+P W + ++ ++RE ++L + + +E++ D +++++ EE+D S++ + Sbjct: 1 MEEPGFWDDPEKSTRMVREVKNLKDDVETYRELEQEYDDIQVMIQMGYEENDASVIPDIQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L +E + + LLSGE D N+A L ++AGAGGTES DW +ML RMY RWAE++ Sbjct: 61 EMLDHFIKTLEDMRLKLLLSGEYDKNNAILRLNAGAGGTESCDWCSMLYRMYCRWAERKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ DG+EAGIKS T+ + G NAYG+L+ E GVHRLVRISP+++ +R TSF S Sbjct: 121 FKYEVLDFLDGDEAGIKSVTIQVNGENAYGYLRSEHGVHRLVRISPFNAAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P ++ +++E++ D R+DTYR+SGAGGQH+N T SA+RITH+PTG+VV CQ ERSQ Sbjct: 181 DVMPDIEADLDVEVNPDDIRVDTYRSSGAGGQHINKTSSAIRITHMPTGIVVTCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK +A ML+AKLY L+ Q+ A +IGWG QIRSYVLQPY MVKD RT Sbjct: 241 FQNKDKAMQMLKAKLYMLKQQESAAKAAGIRGEVKDIGWGNQIRSYVLQPYTMVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + VLDG +D F+ A L Sbjct: 301 EESGNVDAVLDGSIDSFISAYLRW 324 >gi|94495879|ref|ZP_01302458.1| protein chain release factor B [Sphingomonas sp. SKA58] gi|94424571|gb|EAT09593.1| protein chain release factor B [Sphingomonas sp. SKA58] Length = 377 Score = 269 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 210/353 (59%), Positives = 263/353 (74%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ L L DWD A++RL LN + EDP LW N +A+ +MRER LD+AI + Sbjct: 13 RIDAALALLRQSLDWDRALRRLDELNARVEDPTLWDNAKQAQEVMRERTRLDSAIGATRA 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ D L+E+A E D ++ E L+ + + + ++LL+GEADS D YLE+ Sbjct: 73 IEAEKSDTAELIEMAEAEGDEGMVDEAVAALKALADRADEDKIKALLAGEADSYDTYLEI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA ML RMY RWAE+R +K E ++ G++AGIKSAT L+KG NAYG+ Sbjct: 133 HAGAGGTESQDWAEMLSRMYRRWAERRGYKVELVDYQAGDQAGIKSATFLMKGENAYGYA 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD I+IE+ ESD +IDTYRASGAGGQ Sbjct: 193 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDDIDIEVKESDLKIDTYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+P+G++V Q +RSQHKN+A A NML+A+LYE EL++REE A+ Sbjct: 253 HVNTTDSAVRITHVPSGIIVASQNDRSQHKNRATAMNMLKARLYEAELRRREEAASSDYQ 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +KTEIGWG QIRSYVLQPYQ+VKDLRT + TSP DVLDG LD FM A L+ K Sbjct: 313 AKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTSPDDVLDGALDPFMAAALSQK 365 >gi|323489912|ref|ZP_08095134.1| peptide chain release factor 2 [Planococcus donghaensis MPA1U2] gi|323396419|gb|EGA89243.1| peptide chain release factor 2 [Planococcus donghaensis MPA1U2] Length = 327 Score = 269 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 169/325 (52%), Positives = 214/325 (65%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W N A+ ++ E L ++ + + + LEL EEDD + ++ Sbjct: 1 MLDPDFWNNQETAQTVISELNGLKEVVNAYYSFMETQENMEMSLELLREEDDEDLHEDVD 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++++ ++ + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR Sbjct: 61 KDMKQFISDLADYELTMLLSEPYDKNNAILELHPGAGGTESQDWCSMLLRMYTRWAEKRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAG+KS TL I+G NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLAGDEAGVKSVTLGIRGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P IEI+I D +IDTYRASGAGGQH+NTTDSAVRITH PTG VV CQQERSQ Sbjct: 181 EVMPEFTGEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHAPTGAVVTCQQERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A ML+AKLY L++++ E + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 IKNREKAMQMLKAKLYALKIEEEEARLLEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGD+D F+ + L K Sbjct: 301 FETGNLGAVMDGDIDGFINSLLRSK 325 >gi|302878965|ref|YP_003847529.1| hypothetical protein Galf_1754 [Gallionella capsiferriformans ES-2] gi|302581754|gb|ADL55765.1| hypothetical protein Galf_1754 [Gallionella capsiferriformans ES-2] Length = 367 Score = 269 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 180/351 (51%), Positives = 247/351 (70%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + N L D+D +RL+ + EDP +WQ+ A+ L RER+ L++ + + +I Sbjct: 16 LSLRSNELRRYLDYDTKQERLTEVCELAEDPAIWQDAKRAQELGRERKMLESVVFGLGKI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 Q L D L E++ EE+D + L T+ ++ I+ V +F + + D N ++++ Sbjct: 76 QQDLTDAAELFEMSQEENDEASLMSTAADIDDIERRVAEMEFRRMFNHPMDPNSCFIDIQ 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA+ML+RMY R+AE++ ++ E LEI DG+ AGIK A++ + G A+G L+ Sbjct: 136 AGSGGTEAQDWASMLMRMYVRYAERKGYQVEVLEISDGDVAGIKGASIKLIGEYAFGHLR 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+DS +RRHTSFSS++VYP VDDSIEIEI+ +D R+DTYRASGAGGQH Sbjct: 196 TETGVHRLVRKSPFDSGNRRHTSFSSVFVYPEVDDSIEIEINPADLRVDTYRASGAGGQH 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N TDSAVRITHIPT +VVQCQ +RSQH+N+A+A ML++++YE EL+KR E E Sbjct: 256 INKTDSAVRITHIPTNIVVQCQSDRSQHRNRAEAMAMLKSRMYEEELRKRNEEKQEMEDG 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KT+IGWG QIRSYVL +KDLRTN E + VLDGDLDDF+ A+L Sbjct: 316 KTDIGWGHQIRSYVLD-QSRIKDLRTNHEVGNTQGVLDGDLDDFISASLKQ 365 >gi|110802702|ref|YP_699445.1| peptide chain release factor 2 [Clostridium perfringens SM101] gi|123145940|sp|Q0SR12|RF2_CLOPS RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 364 Score = 269 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 155/350 (44%), Positives = 228/350 (65%), Gaps = 1/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L +G D + ++ + L K ++ W +V +A+ + +E + + + I K Sbjct: 14 ELKNNLKEMGASLDLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKN 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + +R+ D +L EL E D+ + + ++ + E++ + E++LSGE D N+A L + Sbjct: 74 LNERIDDVEVLKELMEENDEETAKE-IISEVKALSKEIDTLKIETILSGEYDRNNAILTL 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H G GG+++ DW MLLRMYTRW EK+ + E ++ G+EAG+KS TL +KG AYG+L Sbjct: 133 HTGVGGSDANDWTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+G+HRLVRISP+++N +R TSF+S+ V P + +IEI+ D RIDTYRA GAGGQ Sbjct: 193 KAEKGIHRLVRISPFNANGKRQTSFASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPTG+VVQCQ ERSQ N+ A ML++KL EL+ + +E Sbjct: 253 HVNKTESAVRITHIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++GWG QIRSYV PY MVKD RTN+E ++ + V+ GD+D+F+ A L Sbjct: 313 ELKDMGWGSQIRSYVFHPYSMVKDHRTNVETSNVNGVMGGDIDNFIIAYL 362 >gi|187734757|ref|YP_001876869.1| peptide chain release factor 2 [Akkermansia muciniphila ATCC BAA-835] gi|187424809|gb|ACD04088.1| peptide chain release factor 2 [Akkermansia muciniphila ATCC BAA-835] Length = 329 Score = 269 bits (687), Expect = 5e-70, Method: Composition-based stats. Identities = 163/326 (50%), Positives = 217/326 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + A+ LM E L + + ++ RL D +ELA E DD + +E Sbjct: 1 MSAPDFWDDQNAARALMAEVNPLKHRMEAFSALKSRLEDIDAAIELAQEADDDDLGREAV 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + R + + + +LL+G D Y+ +HAGAGGTE+ DWA+MLLRMY RW E+R Sbjct: 61 EEFARWQKSLADFELLTLLNGPQDQASCYVTIHAGAGGTEACDWASMLLRMYIRWCERRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F LE DG++AGI+S TL + G AYG+LK E+G+HRLVRISP+DS +RHTSF+S+ Sbjct: 121 FSVTYLESTDGDDAGIRSVTLKVDGEYAYGYLKNERGIHRLVRISPFDSAGKRHTSFASL 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 P V DSI IEI + D ++DTYR+ G GGQ+VN ++AVRITHIP+GV+V CQ ERSQ Sbjct: 181 DATPEVSDSINIEILDKDLKVDTYRSGGKGGQNVNKVETAVRITHIPSGVIVACQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK +A NMLRAKLY++E K++ A+ S K +IGWG QIRSYV QPYQMVKDLRT Sbjct: 241 LRNKEEAMNMLRAKLYQIEEDKKQAEADRQYSEKGDIGWGNQIRSYVFQPYQMVKDLRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355 +E + DV+DG+LD F++A L K Sbjct: 301 VESGNIQDVMDGNLDPFIEAMLRGHK 326 >gi|295398527|ref|ZP_06808561.1| peptide chain release factor RF2 [Aerococcus viridans ATCC 11563] gi|294973250|gb|EFG49043.1| peptide chain release factor RF2 [Aerococcus viridans ATCC 11563] Length = 353 Score = 269 bits (687), Expect = 6e-70, Method: Composition-based stats. Identities = 164/346 (47%), Positives = 219/346 (63%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + GGLFD + L+ P W + +A+ ++ L + D Sbjct: 1 MTASGGLFDLEKMEADLAEYEADMVQPGFWDDSEKAQSVIDANNALKKVYDEFNNLADEY 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 + +L E+ EE D + +E + +Q + ++ + LLSGE D NDA LE+H GAG Sbjct: 61 EELTLLNEMVKEEPDPDLSKELVNRIQAFQAKISAYERNILLSGEYDHNDALLEIHPGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTESQDWA+MLLRMY RWA++ ++ L+ +G+EAGIKS TL IKG NAYG+LK E G Sbjct: 121 GTESQDWASMLLRMYQRWADQHDYQVTTLDFQNGDEAGIKSVTLEIKGLNAYGFLKSEDG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRLVRISP+DSN RRHTSF+S+ + PV+D + EIEI ESD +D +RASGAGGQH+N T Sbjct: 181 IHRLVRISPFDSNKRRHTSFASVEIMPVLDQNTEIEIDESDIEMDVFRASGAGGQHINKT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+TH+PTG+VV Q +RSQ +N+ A ML+AKL L +K + + K+EI Sbjct: 241 SSAVRLTHVPTGIVVASQGQRSQFQNRDTAMKMLQAKLAHLLAEKNAKELDEIRGEKSEI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYV PY MVKD RT+ E + V+DGDLD F+ A L Sbjct: 301 AWGSQIRSYVFHPYNMVKDHRTDYETANVQGVMDGDLDGFIDAYLK 346 >gi|163857078|ref|YP_001631376.1| peptide chain release factor 2 [Bordetella petrii DSM 12804] gi|163260806|emb|CAP43108.1| peptide chain release factor 2 [Bordetella petrii] Length = 337 Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats. Identities = 168/335 (50%), Positives = 241/335 (71%), Gaps = 1/335 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 +RL +N + EDP +W + A+ L RE++ L++ ++ + ++ + D L L ELA Sbjct: 2 KAERLQVVNAELEDPAVWNDPKHAQDLGREKKSLEDVVTTLTALRSGVADALELFELASA 61 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 +DD + L+ + + ++E +F + S AD + +L++ AGAGGTE+QDWA+MLL Sbjct: 62 DDDDATLESIESDADGFQQQLEGLEFRRMFSNPADPLNCFLDIQAGAGGTEAQDWASMLL 121 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 R Y ++AE++ FK E LE +GE AGIKSAT+ ++G A+G+L+ E GVHRLVR SP+DS Sbjct: 122 RQYLKYAERKGFKAEVLEESEGEVAGIKSATIKLEGDYAFGYLRTETGVHRLVRKSPFDS 181 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 + RHTSF+S++VYP VDDS EI+++ +D R+DTYRASGAGGQH+N TDSAVR+TH+PTG Sbjct: 182 SGGRHTSFASVFVYPEVDDSFEIDVNPADLRVDTYRASGAGGQHINKTDSAVRLTHLPTG 241 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VVQCQ +RSQH+N+A+A ML++KLYELE++ R E SKT++GWG QIRSYVL Sbjct: 242 IVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMAEQQKLEDSKTDVGWGHQIRSYVLD 301 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 302 -QSRIKDLRTNVEISNTQKVLDGDLDTFIQASLKQ 335 >gi|154687644|ref|YP_001422805.1| hypothetical protein RBAM_032440 [Bacillus amyloliquefaciens FZB42] gi|154353495|gb|ABS75574.1| PrfB [Bacillus amyloliquefaciens FZB42] Length = 327 Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats. Identities = 167/325 (51%), Positives = 219/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + +A+ ++ E L ++ ++ + + + +L EE D + QE Sbjct: 1 MAEPEFWNDQQKAQTVINEANGLKEYVNSYHQLSESHEELQMTHDLLKEEPDQDLQQELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L+ + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+R Sbjct: 61 KELKSLTKELNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P ++ I+I+I D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ Sbjct: 181 EVMPEFNEEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A ML+AKLY+ +++++ + + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 IKNRDRAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGD+D F+ A L K Sbjct: 301 TEMGNVQAVMDGDIDIFIDAYLRSK 325 >gi|148652647|ref|YP_001279740.1| peptide chain release factor 2 [Psychrobacter sp. PRwf-1] gi|148571731|gb|ABQ93790.1| bacterial peptide chain release factor 2 (bRF-2) [Psychrobacter sp. PRwf-1] Length = 325 Score = 268 bits (686), Expect = 6e-70, Method: Composition-based stats. Identities = 172/324 (53%), Positives = 226/324 (69%), Gaps = 1/324 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P LW + A + +E+ LD I+ I + L D +LELA+E DD +L+E Sbjct: 1 MASPELWNDPERATKISKEKSQLDAVITTITGLDTTLEDAAAMLELAVEADDEGLLEEVQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + VE +F+ + GE D+N+ ++++ +G+GGTE+QDWA MLLRMYTRW E Sbjct: 61 NELNAAQALVEDLEFKRMFDGEMDANNCFVDIQSGSGGTEAQDWAEMLLRMYTRWCESHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E +E+ G AG+KSA+ + G A+GWL+ E GVHRLVR SP+DSN+ RHTSF+++ Sbjct: 121 FKVEIIEVSAGSVAGVKSASFKVSGDYAFGWLRTETGVHRLVRKSPFDSNNGRHTSFAAV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 +V P +DD EI+I+ +D RIDTYR+SGAGGQHVNTTDSAVRITH+PTG VVQCQ ERSQ Sbjct: 181 FVSPEIDDDFEIDINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTGTVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NKA A MLRAKLYELE+QKR E E +K+++GWG QIRSYVL +KDLRT Sbjct: 241 HGNKATAMKMLRAKLYELEMQKRMEQQQAVEDNKSDVGWGSQIRSYVLDD-SRIKDLRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 +E + VLDGDLD F++A+L Sbjct: 300 VETFNTGAVLDGDLDQFIEASLKA 323 >gi|294010764|ref|YP_003544224.1| peptide chain release factor RF-2 [Sphingobium japonicum UT26S] gi|292674094|dbj|BAI95612.1| peptide chain release factor RF-2 [Sphingobium japonicum UT26S] Length = 375 Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats. Identities = 210/353 (59%), Positives = 265/353 (75%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ L+ L DWD A++RL LN + EDP LW N +A+ +MRER LD AI + Sbjct: 11 RIDAALDLLRRFLDWDRALRRLDELNARVEDPTLWDNQRQAQEVMRERTRLDAAIGATRA 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I D L+E+A E D ++ E +L+ + + + ++LL+GEAD++D YLE+ Sbjct: 71 IDSEKTDTAELIEMAEAEGDEDMVNEAIASLKALADRADEDKIKALLAGEADASDTYLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA ML RMY RWAE+R +K E ++ G++AGIKSAT L KG NAYG+ Sbjct: 131 HAGAGGTESQDWAEMLSRMYRRWAERRGYKVELVDYQAGDQAGIKSATFLFKGENAYGYA 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD+IEIE++ESD +IDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDNIEIEVNESDLKIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+P+G++V Q +RSQHKN+A A NML+A+LYE EL++REE A+ Sbjct: 251 HVNTTDSAVRITHVPSGIIVASQNDRSQHKNRATAMNMLKARLYEAELRRREEAASGEYQ 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +KTEIGWG QIRSYVLQPYQ+VKDLRT + TSP DVLDG LD FM A L+ K Sbjct: 311 AKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTSPDDVLDGALDPFMAAALSQK 363 >gi|254386617|ref|ZP_05001914.1| peptide chain release factor 2 [Streptomyces sp. Mg1] gi|194345459|gb|EDX26425.1| peptide chain release factor 2 [Streptomyces sp. Mg1] Length = 369 Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats. Identities = 161/353 (45%), Positives = 218/353 (61%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMGSIEAVLDLDKLRAEIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTETL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA E DD L E + L ++ ++ + +LLSGE +A + + Sbjct: 73 RGRIDDLAVLFELAQEMDDADTLAEAENELTSVRKALDEMEVRTLLSGEYAEREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ + TE E EEAGIKS T ++K P AYG L Sbjct: 133 AEAGGVDASDFAERLQRMYLRWAERHGYPTEVYETSYAEEAGIKSTTFVVKAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ S +EI E + RID YRASG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVESSDHVEIDEGELRIDVYRASGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A N+L+AKL LE +++EE A + Sbjct: 253 VNTTDSAVRITHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQAKMDALK 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P VLDG++D F++A + +K Sbjct: 311 DGGSSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLEAGIRWRK 363 >gi|224475896|ref|YP_002633502.1| peptide chain release factor RF-2, major part [Staphylococcus carnosus subsp. carnosus TM300] gi|222420503|emb|CAL27317.1| peptide chain release factor RF-2, major part [Staphylococcus carnosus subsp. carnosus TM300] Length = 333 Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats. Identities = 156/325 (48%), Positives = 220/325 (67%), Gaps = 1/325 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 DP+ W + +A+ ++ + L + ++ ++++ L D EL EE D + + Sbjct: 1 MMTDPNFWDDQNKAQEIIDKNNALKHVVNGYRDLEAELEDMSATHELLAEEFDEDLKADL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + K +++ + + LL+G D+N+A LE+H GAGGTESQDWA+MLLRMY R+AE++ Sbjct: 61 EEEANAFKDKLDQFELQLLLNGPYDANNAILELHPGAGGTESQDWASMLLRMYQRYAEQQ 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E + G+EAG+KS TL+IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 GFKVEFADYLPGDEAGVKSVTLVIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 180 Query: 209 IWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P ++ IEIE++ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ER Sbjct: 181 CDVIPEFSNNEIEIEVNPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KN+ A ML++KLY+L+L+++E + EIGWG QIRSYV PY MVKD R Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLA 352 TN E + + V+DG++ F++A L Sbjct: 301 TNEETGNVNAVMDGEIGPFIEAYLR 325 >gi|257092654|ref|YP_003166295.1| peptide chain release factor 2 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045178|gb|ACV34366.1| peptide chain release factor 2 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 347 Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats. Identities = 172/343 (50%), Positives = 239/343 (69%), Gaps = 1/343 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+D +L + + EDP +W N A+ L RER+ L+N + + + D L D Sbjct: 4 GGIFDYDQKADQLKTVARELEDPAVWDNAERAQELGRERRSLENVVLTLNRVADSLRDTG 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L +A EEDD L + ++ I+ EV +F + + AD + ++++ AGAGGTE+ Sbjct: 64 ELFAMAREEDDDETLNAVAADIDGIEKEVSGLEFRRMFNNPADPLNCFVDIQAGAGGTEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMY R+AE++ + E LE +GE AGIK+A++ I G AYG L+ E G+HRL Sbjct: 124 QDWAAMLLRMYLRYAERKGYAVEVLEESEGEVAGIKTASIKISGEYAYGMLRSETGIHRL 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DSN+RRHTSF S+ YP +DDS E+EI+ ++ RIDTYRASGAGGQH+N TDSAV Sbjct: 184 VRKSPFDSNARRHTSFCSVSAYPEIDDSFEVEINPAELRIDTYRASGAGGQHINKTDSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH+PT +VVQCQ +RSQH+N+A+A ML++++YE E++KR+ E +K++IGWG Sbjct: 244 RITHLPTNIVVQCQNDRSQHRNRAEAMAMLKSRIYEAEMRKRQTEQQKLEDAKSDIGWGH 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRTN+E + VLDGDLD F++A+L Sbjct: 304 QIRSYVLD-QSRIKDLRTNVEVGNTQGVLDGDLDQFIEASLKQ 345 >gi|240850608|ref|YP_002972008.1| peptide chain release factor 2 [Bartonella grahamii as4aup] gi|240267731|gb|ACS51319.1| peptide chain release factor 2 [Bartonella grahamii as4aup] Length = 375 Score = 268 bits (686), Expect = 7e-70, Method: Composition-based stats. Identities = 226/353 (64%), Positives = 283/353 (80%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + + L G DWD +++RL +LN K EDP LW + +A+ +MRERQ LD++I+ + Sbjct: 11 EIQKAIQLLRGHLDWDQSLKRLEYLNQKAEDPSLWDDAQQAQDMMRERQRLDDSINGLLS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 L + + L+ + EE D I+ + ++++ +K E++ +Q + LLSGEAD ND YLEV Sbjct: 71 FTKTLEECIELIAMGEEESDVEIIADAENSIRNLKNEIDKRQIDVLLSGEADPNDTYLEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA+MLLRMY RWAE+ + K E LEIHDGEEAGIKSAT+L+KG NAYG L Sbjct: 131 HAGAGGTESQDWASMLLRMYMRWAEQHEMKVEILEIHDGEEAGIKSATILVKGHNAYGML 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DSN++RHTSF+SIWVYPV+DD+IE+++SE+D RIDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPFDSNAKRHTSFASIWVYPVIDDNIEVDVSEADVRIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+LYE EL+KREE N ES Sbjct: 251 HVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLYEEELKKREEETNAAES 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 SKTEIGWG QIRSYVLQPYQ+VKDLRT IE T P VL+G+LD F++A LA + Sbjct: 311 SKTEIGWGHQIRSYVLQPYQLVKDLRTGIENTDPQSVLNGNLDAFIEAALARR 363 >gi|329928717|ref|ZP_08282566.1| peptide chain release factor 2 [Paenibacillus sp. HGF5] gi|328937498|gb|EGG33916.1| peptide chain release factor 2 [Paenibacillus sp. HGF5] Length = 339 Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 168/332 (50%), Positives = 226/332 (68%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 + K P W + +A+ L+ E + +++ +++Q D ++++ELA EE D Sbjct: 2 IENFEEKMAAPDFWDDNEKAQALIAEMNSVKSSVDQYQKLQADYDDAVVMIELADEEGDD 61 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 S+ E + ++ + VE + + LL+ D +A LE+H GAGGTESQDW ML RMYT Sbjct: 62 SLAGEIGETIKDLVGRVEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLHRMYT 121 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 RWAEKR FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RR Sbjct: 122 RWAEKRGFKVETLDYLPGDEAGIKSVTLLIKGFNAYGYLKAEKGVHRLVRISPFDSSGRR 181 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSF S V P ++D +E++I D +IDTYRASGAGGQH+NTTDSAVRITH+PTGVVV Sbjct: 182 HTSFVSCDVVPEINDEVELDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGVVVT 241 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 CQ ERSQ KN+ +A MLR+KLYE +++++++ +++I WG QIRSYV PY M Sbjct: 242 CQNERSQIKNRERAMTMLRSKLYERKIEEQQKELAEIRGEQSDIAWGSQIRSYVFHPYSM 301 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 VKD RT +E + V+DGDLD F+ L + Sbjct: 302 VKDHRTQVETGNIGAVMDGDLDGFIDGYLRSQ 333 >gi|253580007|ref|ZP_04857274.1| peptide chain release factor 2 [Ruminococcus sp. 5_1_39B_FAA] gi|251848526|gb|EES76489.1| peptide chain release factor 2 [Ruminococcus sp. 5_1_39BFAA] Length = 343 Score = 268 bits (685), Expect = 8e-70, Method: Composition-based stats. Identities = 157/336 (46%), Positives = 225/336 (66%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 N Q++ L + E P W + ++ M+E + + + + + + ++ D ++E+ Sbjct: 3 NKEQKVEELEREMEAPDFWDDAEVSQKKMKELKDMKDDMETYQNLVTQMEDMETMIEMGY 62 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 EE+D +++ E + L + + + + ++LLSGE DS +A ++++AGAGGTE+ DW ML Sbjct: 63 EENDPALIPEIQEMLDEFQKDFDNIRIKTLLSGEYDSENAIIKLNAGAGGTEACDWCGML 122 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY+RWA+K+ F E L+ DG+EAGIKS T + G NAYG+LK E+GVHRLVRISP++ Sbjct: 123 YRMYSRWADKKGFTLEVLDYLDGDEAGIKSVTFQVNGTNAYGYLKSEKGVHRLVRISPFN 182 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 + +R TSF S V P + +++EI++ + RIDTYR+SGAGGQH+N T SA+RITH PT Sbjct: 183 AAGKRQTSFVSCDVMPDIKKDLDVEINDDEIRIDTYRSSGAGGQHINKTSSAIRITHYPT 242 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ ERSQH NK +A ML+AKLY L+ Q+ EE + T+IGWG QIRSYV+ Sbjct: 243 GIVVQCQNERSQHMNKDKAMQMLKAKLYLLKQQEAEEKLSGIRGEVTDIGWGNQIRSYVM 302 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QPY MVKD RTN E + VLDG +D F+ A L Sbjct: 303 QPYTMVKDHRTNEETGNVDAVLDGGIDIFINAYLKW 338 >gi|224503251|ref|ZP_03671558.1| peptide chain release factor 2 [Listeria monocytogenes FSL R2-561] Length = 338 Score = 268 bits (685), Expect = 9e-70, Method: Composition-based stats. Identities = 169/336 (50%), Positives = 220/336 (65%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 R++ L + DP+ W + A+ ++ E +++ I LEL E Sbjct: 1 MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D + +E +++ + + + +LS D N+A LE+H GAGGTESQDW +MLL Sbjct: 61 EADEDLQEELEKDIKAYMATISAFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLL 120 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RW+EK+ FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS Sbjct: 121 RMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDS 180 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 + RRHTSF S+ V P +D IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G Sbjct: 181 SGRRHTSFVSVDVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSG 240 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV CQ ERSQ KN+ QA ML+ KLY+ E +++E + EIGWG QIRSYV Sbjct: 241 IVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFH 300 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E + V+DGDLDDF+ A L + Sbjct: 301 PYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 336 >gi|254454841|ref|ZP_05068278.1| peptide chain release factor 2 [Octadecabacter antarcticus 238] gi|198269247|gb|EDY93517.1| peptide chain release factor 2 [Octadecabacter antarcticus 238] Length = 375 Score = 268 bits (685), Expect = 9e-70, Method: Composition-based stats. Identities = 192/353 (54%), Positives = 251/353 (71%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L+ L +WD A RL N + EDP LW + A+ LMR+RQ L +AI+ + Sbjct: 11 EIEKSLSLLAQRMEWDTASHRLEEFNARVEDPTLWDDPDAAQKLMRDRQSLVDAIASYEA 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L D++ L+E+ EDD ++ E D L+ + + K+ E+LL+GEAD+ND +LE+ Sbjct: 71 IRQELSDHVELIEMGEMEDDAGVVTEAEDGLKVLAAKAAEKELEALLNGEADANDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTE+ DWA ML RMY RWAE++ +K E GEE GIKSA+ I G NAYGWL Sbjct: 131 NSGAGGTEACDWAAMLARMYVRWAERKGYKVELQSESAGEEVGIKSASYKISGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++E+ KR + N Sbjct: 251 HVNTTDSAVRITHAPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQIEMDKRSALVNEVHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + + GWG QIRSYVLQPYQMVKDLRT E + VLDGDLD FM ATLA+ Sbjct: 310 NAGDAGWGNQIRSYVLQPYQMVKDLRTRHETSDTQGVLDGDLDAFMGATLAMD 362 >gi|89055024|ref|YP_510475.1| peptide chain release factor 2 [Jannaschia sp. CCS1] gi|88864573|gb|ABD55450.1| bacterial peptide chain release factor 2 (bRF-2) [Jannaschia sp. CCS1] Length = 375 Score = 268 bits (685), Expect = 9e-70, Method: Composition-based stats. Identities = 191/353 (54%), Positives = 243/353 (68%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ L LG D + A RL N + EDP+LW + +A+ LMR+RQ L + + + Sbjct: 11 KIRNSLTLLGQRMDIETAPHRLEEFNARVEDPNLWNDPEKAQKLMRDRQVLVDKMKQYET 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ + DN L+EL EDD ++ E L + E K+ E+LL GEADSND +LE+ Sbjct: 71 IRQGVDDNAELIELGEMEDDAEVVAEAEAALTALVDEAAAKELEALLDGEADSNDTFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTES DWA+ML RMYTRWAEK+ + + GEEAGIKSA I G NAYGWL Sbjct: 131 NSGAGGTESCDWASMLARMYTRWAEKQGYDVDLQSFSAGEEAGIKSAVYKISGHNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD RIDTYR+SGAGGQ Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL KR N Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDKRSAKVNEVHE 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + + GWG QIRSYVLQPYQMVKDLRT E + VLDG++D M + LA+ Sbjct: 310 NAGDAGWGNQIRSYVLQPYQMVKDLRTAFETSDTQGVLDGNIDGLMASVLAMD 362 >gi|110834510|ref|YP_693369.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2] gi|110647621|emb|CAL17097.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2] Length = 356 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 172/350 (49%), Positives = 228/350 (65%), Gaps = 8/350 (2%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+ +RL+ + + E P +W + A+ L +ER L+ + I + L D Sbjct: 6 GGIFDYVQKSERLTEVERELESPDVWNDPPYAQALGKERSQLEGVVKTIDDASQGLEDTS 65 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LL+L +EE D L E +L+ ++ V +F + SG+ D AYL++ +G+GGTE+ Sbjct: 66 ALLDLVVEEGDEDTLSEVESDLRDLEKMVADLEFRRMFSGQMDPCSAYLDIQSGSGGTEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA M+LRMY RW E FKTE +E G+ AGIKSAT+ +G AYGWL+ E GVHRL Sbjct: 126 QDWAEMMLRMYLRWGEAHGFKTELVEASAGDVAGIKSATVRFEGDYAYGWLRTETGVHRL 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS RRHTSFSS++V P VDD I+IEI + R+DTYRASGAGGQHVN TDSAV Sbjct: 186 VRKSPFDSGGRRHTSFSSVFVSPEVDDDIDIEIDLGNMRVDTYRASGAGGQHVNRTDSAV 245 Query: 251 RITH-------IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 R+T+ VV QCQ ERSQH+NK +A M++AK+YELE+Q+R E+SK Sbjct: 246 RLTYLFKDDGGTEHTVVTQCQSERSQHQNKDKAMKMMQAKVYELEMQRRNAEKQALENSK 305 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 306 ADIGWGSQIRSYVLDD-ARIKDLRTGVENRNTQAVLDGALDPFIEASLKA 354 >gi|47096102|ref|ZP_00233703.1| peptide chain release factor 2 [Listeria monocytogenes str. 1/2a F6854] gi|258611482|ref|ZP_05232771.2| peptide chain release factor 2 [Listeria monocytogenes FSL N3-165] gi|258612274|ref|ZP_05269486.2| peptide chain release factor 2 [Listeria monocytogenes F6900] gi|293596674|ref|ZP_05263420.2| peptide chain release factor 2 [Listeria monocytogenes J2818] gi|47015563|gb|EAL06495.1| peptide chain release factor 2 [Listeria monocytogenes str. 1/2a F6854] gi|258600468|gb|EEW13793.1| peptide chain release factor 2 [Listeria monocytogenes FSL N3-165] gi|258610392|gb|EEW23000.1| peptide chain release factor 2 [Listeria monocytogenes F6900] gi|293591414|gb|EFF99748.1| peptide chain release factor 2 [Listeria monocytogenes J2818] Length = 338 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 169/336 (50%), Positives = 220/336 (65%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 R++ L + DP+ W + A+ ++ E +++ I LEL E Sbjct: 1 MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D + +E +++ + + + +LS D N+A LE+H GAGGTESQDW +MLL Sbjct: 61 EADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLL 120 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RW+EK+ FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS Sbjct: 121 RMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDS 180 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 + RRHTSF S+ V P +D IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G Sbjct: 181 SGRRHTSFVSVDVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSG 240 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV CQ ERSQ KN+ QA ML+ KLY+ E +++E + EIGWG QIRSYV Sbjct: 241 IVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFH 300 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E + V+DGDLDDF+ A L + Sbjct: 301 PYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 336 >gi|312792717|ref|YP_004025640.1| hypothetical protein Calkr_0478 [Caldicellulosiruptor kristjanssonii 177R1B] gi|312179857|gb|ADQ40027.1| hypothetical protein Calkr_0478 [Caldicellulosiruptor kristjanssonii 177R1B] Length = 372 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 170/349 (48%), Positives = 232/349 (66%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 L + D D L L +T P WQ++ ++ ++++ + L + I +++ Sbjct: 15 EEDLKEMRVSLDIDRLESELKSLENETSSPDFWQDLENSQKVLQKIKRLKDKIERFQKLY 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D +L EL+L+E + + +E L ++ ++E + E LL+G D N+A L +HA Sbjct: 75 SQWEDLKVLTELSLDEGNHEMAEELEKELLDLERKIEDFKIEVLLNGPYDKNNAILSIHA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+QDWA MLLRMYTRWA K+ +K E L+I GEEAGIK+ T+ I G NAYG+LK Sbjct: 135 GAGGTEAQDWAEMLLRMYTRWAVKKGYKVETLDILPGEEAGIKNVTVRIVGENAYGYLKA 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+D+ RRHTSF+++ V P V+D +IEI E D IDT+RASGAGGQHV Sbjct: 195 EKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTFRASGAGGQHV 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRI HIPTG+VV CQ ERSQHKN+ A +L+AKL EL+ ++R E + + Sbjct: 255 NKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQ 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 TEIGWG QIRSYV PY +VKD RT E + V+DG++D F+ A L Sbjct: 315 TEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363 >gi|297171663|gb|ADI22657.1| protein chain release factor B [uncultured Gemmatimonadales bacterium HF0500_22O06] Length = 356 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 181/345 (52%), Positives = 236/345 (68%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 LGG FD ++ +RL L+ + P W + +AK + E L + + R+ Sbjct: 4 KSLGGTFDLESRQERLRVLDQEMVQPGFWDSPDQAKATIDESNRLKGWVDPWSSLDARVS 63 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + L+EL EE+D + E + L ++ ++E + ++L G D DA + +H GAGG Sbjct: 64 ELTALVELLEEEEDADLEAEFTRGLASVEKDLEVLEVRTMLQGGDDHRDALVTIHPGAGG 123 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 ESQDWA ML+RMYTRW+E+R F E L++ EE GIKSATL IKG AYG+LK E GV Sbjct: 124 LESQDWAGMLMRMYTRWSERRGFGVEVLDLQSAEEGGIKSATLEIKGECAYGYLKAEGGV 183 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVRISP+D SRRHTSF+S+++YP+V+D IEI+I ESD RIDTYRASGAGGQHVN TD Sbjct: 184 HRLVRISPFDQQSRRHTSFASVFIYPLVEDGIEIDIDESDLRIDTYRASGAGGQHVNKTD 243 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH PTG+V CQQERSQHKN++ A MLRA LY+ LQ++E + E++KTEIG Sbjct: 244 SAVRITHEPTGIVTTCQQERSQHKNRSTAMKMLRAALYQHALQEQERERAVLEATKTEIG 303 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +G QIRSYV QPY MV D RT ++ T+ V+DGDLD F++A L Sbjct: 304 FGNQIRSYVFQPYTMVNDHRTELKITNVQGVMDGDLDPFIEAYLK 348 >gi|20807024|ref|NP_622195.1| protein chain release factor B [Thermoanaerobacter tengcongensis MB4] gi|20515510|gb|AAM23799.1| Protein chain release factor B [Thermoanaerobacter tengcongensis MB4] Length = 347 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 175/342 (51%), Positives = 235/342 (68%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 LFD + + + + + DP W ++ +++ L ++++ L + + + R D L Sbjct: 3 LFDVEGIKKEIEDIEKQMSDPSFWSDLKKSQELSKKQKALKELLEEYESLLSRCEDLYTL 62 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 +EL LEE D SI +E + +K EVE + +LLSG D N+A L +HAG+GGTE+QD Sbjct: 63 IELGLEEGDESIAEEVEREYKELKKEVENLKIRTLLSGPYDKNNAILSIHAGSGGTEAQD 122 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA MLLRMYTRWA + F+ E L+ +GEEAGIKSATLLIKGP AYG+LKGE GVHRLVR Sbjct: 123 WAEMLLRMYTRWANDKGFEVEILDYLEGEEAGIKSATLLIKGPFAYGYLKGEAGVHRLVR 182 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+D+ RRHTSF+ + V P ++D IEIEI D +IDT+RASGAGGQHVN T+SAVRI Sbjct: 183 ISPFDAAGRRHTSFALVEVIPELEDDIEIEIRPEDLKIDTFRASGAGGQHVNKTESAVRI 242 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 TH+PTG+VV CQ ERSQ +N+ A ML+AKL +L +++R+E + E WG QI Sbjct: 243 THLPTGIVVSCQNERSQIQNRETAMKMLKAKLLDLMMKERKEKIEDLKGEHREAAWGNQI 302 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RSYV QPY +VKD RTN E+ + + V+DG++D F+ A L K Sbjct: 303 RSYVFQPYTLVKDHRTNYEEGNVNAVMDGEIDGFINAYLKQK 344 >gi|224499863|ref|ZP_03668212.1| peptide chain release factor 2 [Listeria monocytogenes Finland 1988] gi|284802947|ref|YP_003414812.1| peptide chain release factor 2 [Listeria monocytogenes 08-5578] gi|284996088|ref|YP_003417856.1| peptide chain release factor 2 [Listeria monocytogenes 08-5923] gi|284058509|gb|ADB69450.1| peptide chain release factor 2 [Listeria monocytogenes 08-5578] gi|284061555|gb|ADB72494.1| peptide chain release factor 2 [Listeria monocytogenes 08-5923] Length = 338 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 170/336 (50%), Positives = 221/336 (65%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 R++ L + DP+ W + A+ ++ E +++ I LEL E Sbjct: 1 MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D + +E +++ + + + +LS D N+A LE+H GAGGTESQDW +MLL Sbjct: 61 EADEDLQEELEKDIKAYMATISAFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLL 120 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RW+EK+ FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS Sbjct: 121 RMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDS 180 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 + RRHTSF S+ V P +DD IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G Sbjct: 181 SGRRHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSG 240 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV CQ ERSQ KN+ QA ML+ KLY+ E +++E + EIGWG QIRSYV Sbjct: 241 IVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFH 300 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E + V+DGDLDDF+ A L + Sbjct: 301 PYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 336 >gi|121602405|ref|YP_989094.1| peptide chain release factor 2 [Bartonella bacilliformis KC583] gi|120614582|gb|ABM45183.1| peptide chain release factor 2 [Bartonella bacilliformis KC583] Length = 376 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 227/353 (64%), Positives = 283/353 (80%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + L L DWD +++RL +LN K EDP LW N +A+ +MRERQ L+++I+ I+ Sbjct: 11 EIQQALQLLRRHLDWDQSLKRLEYLNQKAEDPSLWDNAQQAQDMMRERQSLEDSINSIEL 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +L +++ L+ + EE D ++ + + ++ +K E++ +Q + LLSGEADSND YLE+ Sbjct: 71 FTQKLEESIELIAMGEEERDVDVIADAENTIRELKNEIDKRQIDILLSGEADSNDTYLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTESQDWA MLLRMY RW E+ K K E LEI+DGEEAGIKSAT+LIKG NAYG + Sbjct: 131 HAGAGGTESQDWAAMLLRMYIRWVEQHKMKVEVLEINDGEEAGIKSATILIKGHNAYGMI 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYDSN+RRHTSF+S+WVYPVVDD+I++++SESD RIDTYRASGAGGQ Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFASVWVYPVVDDNIKVDVSESDVRIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+LYE EL+KREE N E+ Sbjct: 251 HVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLYEEELKKREEETNAVEA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 SKTEIGWG QIRSYVLQPYQ+VKDLRT IE T P VL+GDLD F++A LA + Sbjct: 311 SKTEIGWGHQIRSYVLQPYQLVKDLRTGIENTDPQSVLNGDLDRFIEAALAQR 363 >gi|118594576|ref|ZP_01551923.1| Peptide chain release factor 2 [Methylophilales bacterium HTCC2181] gi|118440354|gb|EAV46981.1| Peptide chain release factor 2 [Methylophilales bacterium HTCC2181] Length = 355 Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats. Identities = 173/353 (49%), Positives = 244/353 (69%), Gaps = 1/353 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 ++ ++ L GG FD + + + L+ + EDP W + ++ + +E++ L++ + Sbjct: 2 LESTKNLIPCGGFFDLEEKKRTIKLLSIQQEDPKTWSDRALSQKIGKEKKVLEDIVHQAD 61 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 + L DN L ++A+EE+D + L + ++++ V+ +F+ + S D N+ +++ Sbjct: 62 SLISDLADNQELFDMAVEENDLNTLTTIKSDTEKLEKSVDDIEFKRMFSHPMDPNNCFVD 121 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +G+GGTE+QDWANML RMYTR+AE++ FK E LE +GE AGIK ATL I G A+G+ Sbjct: 122 FQSGSGGTEAQDWANMLFRMYTRYAERKNFKIEVLEYTEGEVAGIKGATLKIIGDYAFGF 181 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ E G+HRLVR SP+DS SRRHTSF+ + VYP +D+SI+I+I+ SD RIDTYRASGAGG Sbjct: 182 LRTESGIHRLVRKSPFDSGSRRHTSFAGVNVYPEIDESIDIDINPSDLRIDTYRASGAGG 241 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QH+N TDSAVRITH+PT VVQCQ +RSQH+NKAQA NML+A+LY +EL KR E E Sbjct: 242 QHINKTDSAVRITHVPTNTVVQCQNDRSQHRNKAQAMNMLKAQLYAIELSKRNEEKQAME 301 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +KT+IGWG QIRSYVL +KDLRTN+E + VLDGDLD F+ +L Sbjct: 302 DAKTDIGWGHQIRSYVLD-QSRIKDLRTNLEVGNTQGVLDGDLDMFISESLKQ 353 >gi|108804456|ref|YP_644393.1| peptide chain release factor 2 [Rubrobacter xylanophilus DSM 9941] gi|108765699|gb|ABG04581.1| bacterial peptide chain release factor 2 (bRF-2) [Rubrobacter xylanophilus DSM 9941] Length = 366 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 178/352 (50%), Positives = 236/352 (67%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS++L+ L FD +R + L+ + P W + AK + E ++ + ++E+ Sbjct: 11 LSQRLDELEAFFDVGRLRERAARLSEEMSRPGFWDDPDRAKGVAAEFSRTEDRLKLMEEL 70 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D+ LLELA + + E I+ +E ++ L +GE D DA L ++ Sbjct: 71 RGRLEDSSELLELAEGDRELLEEVERELEG--IERRIEEQEVARLFTGEYDEGDAILTIN 128 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG +SQDWA ML RMY RWAE+R F E +E +GEEAGIKSAT + GP A+G L Sbjct: 129 SGAGGVDSQDWAEMLARMYRRWAERRGFGLEVIEYTEGEEAGIKSATFSVSGPYAFGLLS 188 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+D++SRRHTSF+S+ V P +DD++E+EI E D ++DTYRASGAGGQH Sbjct: 189 AERGVHRLVRISPFDASSRRHTSFASVAVAPAIDDAVEVEIDEKDLKVDTYRASGAGGQH 248 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSAVRITH+PTG+VVQCQ ERSQH+N+ A +L+A+L+ELE +KRE+ Sbjct: 249 VNKTDSAVRITHLPTGIVVQCQNERSQHQNRETALRVLKARLFELEREKREQEIAAQSGE 308 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K EIGWG QIRSYVL PY+MVKDLRT E VLDGDLD F+ A L + Sbjct: 309 KAEIGWGSQIRSYVLHPYRMVKDLRTGEETGDVDRVLDGDLDRFIYAYLKRR 360 >gi|281185482|sp|Q0TNE1|RF2_CLOP1 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|255529900|gb|ABG84933.2| peptide chain release factor 2, programmed frameshift [Clostridium perfringens ATCC 13124] Length = 362 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 156/350 (44%), Positives = 228/350 (65%), Gaps = 1/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L +G + ++ + L K ++ W +V +A+ + +E + + + I K Sbjct: 12 ELKNNLKEMGASLCLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKN 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + +R+ D +L EL E D+ + + ++ + E++ + E++LSGE D NDA L + Sbjct: 72 LNERIDDVEVLKELMEENDEETAKE-IISEVKALSKEIDTLKIETILSGEYDRNDAILTL 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H G GG+++ DW MLLRMYTRW EK+ + E ++ G+EAG+KS TL +KG AYG+L Sbjct: 131 HTGVGGSDANDWTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+G+HRLVRISP+++N +R TSF+S+ V P + +IEI+ D RIDTYRA GAGGQ Sbjct: 191 KAEKGIHRLVRISPFNANGKRQTSFASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPTG+VVQCQ ERSQ N+ A ML++KL EL+ + +E Sbjct: 251 HVNKTESAVRITHIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++GWG QIRSYV PY MVKD RTN+E ++ + V+DGD+D+F+ A L Sbjct: 311 ELKDMGWGSQIRSYVFHPYSMVKDHRTNVETSNVNGVMDGDIDNFIIAYL 360 >gi|271962992|ref|YP_003337188.1| peptide chain release factor 2 [Streptosporangium roseum DSM 43021] gi|270506167|gb|ACZ84445.1| peptide chain release factor 2 [Streptosporangium roseum DSM 43021] Length = 372 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 161/354 (45%), Positives = 226/354 (63%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ LN + + D D ++L L + P LW + A+ + + +L ++ ++ Sbjct: 12 ELTGTLNSIQDVLDLDAIRKQLEELGEQAAAPDLWNDQEHAQKVTSKLSYLQGEVNRVES 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + RL D +L ELA EDD +E L +K ++ + +LLSGE D+ +A + + Sbjct: 72 LGQRLEDLTVLYELAAAEDDEETREEADRELASLKSDIGALEVRTLLSGEYDAREAVVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++ AGG ++ DWA MLLRMY RWAE++ + TE E EEAGIKSAT +K P AYG L Sbjct: 132 NSQAGGVDAADWAQMLLRMYIRWAERKGYPTEVYETSYAEEAGIKSATFTVKAPYAYGTL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 +GE G HRLVRISP+D+ RR TSF+ + V PVV+ + I+I+E D R+D YR+SG GGQ Sbjct: 192 RGEHGTHRLVRISPFDNQGRRQTSFAGVDVVPVVETTDHIDINEDDLRVDVYRSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A +L++KL E + Q+ N Sbjct: 252 GVNTTDSAVRLTHLPTGIVVSCQNERSQLQNKATAMAVLQSKLLERKRQEEAAALNEIRG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 T WG QIR+YVL PYQ+VKDLRT E +PS VLDGDLD+F+++ + + Sbjct: 312 EAT-TSWGTQIRNYVLHPYQIVKDLRTGTEAGNPSSVLDGDLDEFIESEIRWTR 364 >gi|308175261|ref|YP_003921966.1| peptide chain release factor 2 [Bacillus amyloliquefaciens DSM 7] gi|307608125|emb|CBI44496.1| peptide chain release factor 2 [Bacillus amyloliquefaciens DSM 7] gi|328555234|gb|AEB25726.1| peptide chain release factor 2 [Bacillus amyloliquefaciens TA208] gi|328913595|gb|AEB65191.1| peptide chain release factor 2 [Bacillus amyloliquefaciens LL3] Length = 327 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 168/325 (51%), Positives = 219/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + +A+ ++ E L + ++ ++ + + + EL EE D + QE Sbjct: 1 MAEPEFWNDQQKAQTVINEANGLKDYVNSYHQLSESHEELQMTYELLKEEPDQELQQELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L+ + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+R Sbjct: 61 KELKSLTKELNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 K E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 CKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P ++ I+IEI D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ Sbjct: 181 EVMPEFNEEIDIEIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A ML+AKLY+ +++++ + + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 IKNRDRAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGD+D F+ A L K Sbjct: 301 TEMGNVQAVMDGDIDIFIDAYLRSK 325 >gi|315652552|ref|ZP_07905533.1| peptide chain release factor RF2 [Eubacterium saburreum DSM 3986] gi|315485181|gb|EFU75582.1| peptide chain release factor RF2 [Eubacterium saburreum DSM 3986] Length = 351 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 157/338 (46%), Positives = 229/338 (67%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D+ +++ L+ E+P W + E+ ++RE + L + + +++ D +L+E+ Sbjct: 2 DSKEKKIIELDRAMEEPSFWDDPKESTKIVREAKQLKDTVEKYNKLKSEYEDIGVLIEMG 61 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 EE+D S++ E L+ E++ + +LL+GE DS++A ++++AGAGGTES DW +M Sbjct: 62 YEENDESLIPEIEAMLEEFTKEIDALKIATLLTGEYDSSNAIMKLNAGAGGTESCDWCSM 121 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L RMYTRWA K + + L+I +G+EAGIKS TL I G NAYG+L+ E GVHRLVRISP+ Sbjct: 122 LYRMYTRWAAKEGYTVDVLDILEGDEAGIKSVTLQINGLNAYGYLRSEHGVHRLVRISPF 181 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 ++ +R TSF S + P +++ ++++I+ D RIDTYR+SGAGGQH+N T SA+RITHIP Sbjct: 182 NAAGKRQTSFVSCDIMPDIEEDLDVDINPDDLRIDTYRSSGAGGQHINKTSSAIRITHIP 241 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316 TGVVVQCQ ERSQ +NK +A ML+AKL+ L+ Q E + +IGWG QIRSYV Sbjct: 242 TGVVVQCQNERSQFQNKDKAMQMLKAKLFLLKQQANVEKLSDIRGDVKDIGWGNQIRSYV 301 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +QPY MVKD RT E + + V+DGD+D F+ A L + Sbjct: 302 MQPYTMVKDHRTGAESGNVTAVMDGDIDKFIIAYLTWQ 339 >gi|255264706|ref|ZP_05344048.1| peptide chain release factor 2 [Thalassiobium sp. R2A62] gi|255107041|gb|EET49715.1| peptide chain release factor 2 [Thalassiobium sp. R2A62] Length = 375 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 195/351 (55%), Positives = 244/351 (69%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L L D++ A RL N + EDP LW + A+ LMR+RQ L +AI + I Sbjct: 12 IEKSLVLLAQRLDYETAPYRLEEFNARVEDPTLWDDPEAAQKLMRDRQALVDAIKTYETI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN+ L+EL EDD ++ E L +K K+ E+LL GEAD+ND +LE++ Sbjct: 72 SQELADNVELIELGEMEDDADVVTEAETALATLKDAAAQKELEALLDGEADANDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML RMY RWAEK +K E G+EAGIKSA+ I G NAYGWLK Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKAGYKVELQSESAGDEAGIKSASYKISGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ +D RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPADIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL KR + N + Sbjct: 252 VNTTDSAVRITHAPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQIELDKRSALVNEAHEN 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + GWG QIRSYVLQPYQMVKDLRT+ E + VLDGDLD M ATLA Sbjct: 311 AGDAGWGNQIRSYVLQPYQMVKDLRTSFETSDTKGVLDGDLDGLMAATLAQ 361 >gi|326790220|ref|YP_004308041.1| peptide chain release factor 2 [Clostridium lentocellum DSM 5427] gi|326540984|gb|ADZ82843.1| peptide chain release factor 2 [Clostridium lentocellum DSM 5427] Length = 369 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 166/350 (47%), Positives = 228/350 (65%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 +L +G D + + S L + D W ++ A+ ++++ ++ + I ++ Sbjct: 15 KAKLVEMGNRLDIEGCKVKASELEEMSMDNAFWNDIERAQSVLQQLKNYKDRIEKYDKLC 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 D L+L+E+A E++D + +E + + + +LL E D N+A LE+H Sbjct: 75 GSFEDILVLIEMANEDEDIGLAEEAKACAKTFEEDYSEMLTATLLDQEYDRNNAILELHP 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+ DW ML RMYTRWA+++ FK E L+ DG+EAGIKS T+ I G NAYG+LK Sbjct: 135 GAGGTEACDWVAMLFRMYTRWADRKGFKVEVLDYLDGDEAGIKSVTIQISGENAYGYLKS 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+G+HRLVRISP+DS+ RRHTSF+S V P + D IEI+I D RIDTYR++GAGGQHV Sbjct: 195 EKGIHRLVRISPFDSSGRRHTSFASCDVIPEITDEIEIDIRPEDLRIDTYRSTGAGGQHV 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSAVRITH+PT +VVQCQ ERSQ +N+ +A ML+AKLYE E ++R + + K Sbjct: 255 NTTDSAVRITHLPTNIVVQCQNERSQIQNRERAMQMLKAKLYEKEQEERMDRIDGIRGEK 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +I WG QIRSYV PY MVKD RT+ E + S V+DGD+D FM A L Sbjct: 315 KDIAWGSQIRSYVFHPYNMVKDHRTSEETGNTSAVMDGDIDRFMNAYLGW 364 >gi|257082363|ref|ZP_05576724.1| peptide chain release factor 2 [Enterococcus faecalis E1Sol] gi|256990393|gb|EEU77695.1| peptide chain release factor 2 [Enterococcus faecalis E1Sol] Length = 327 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 170/325 (52%), Positives = 219/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N+ A+ L+ E L ++ + L + ++ EL EE D I +E Sbjct: 1 MGEPGFWDNIETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + ++ + + LL+ D N+A +E+H GAGGTESQDW +MLLRMYTRWAE Sbjct: 61 ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEI I+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA +ML+AKLY+LE++K+ + A + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L + Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325 >gi|256842745|ref|ZP_05548233.1| peptide chain release factor 2 [Lactobacillus crispatus 125-2-CHN] gi|256614165|gb|EEU19366.1| peptide chain release factor 2 [Lactobacillus crispatus 125-2-CHN] Length = 354 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 160/345 (46%), Positives = 211/345 (61%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LGGLFD D + + K P W N +A+ L+ E L ++Q D Sbjct: 2 TLGGLFDLDAIDESIEINENKMAQPDFWNNQEKAQKLISETNRLKEKRDSFLKLQTSYED 61 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 +EL EE D + +E +L ++ + + + LLSG+ DS++A +E+H GAGGT Sbjct: 62 ETTAVELLREEPDPDLQKEVEADLATLQEDFHNYELDLLLSGKYDSHNALMEIHPGAGGT 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ DW MLLRMY R+ + FK E + GEEAG+KS + I G NAYG LK E GVH Sbjct: 122 EAMDWGQMLLRMYQRYCDTAGFKFEINDYEPGEEAGLKSVSARIVGKNAYGMLKSENGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVRISP+D+ RRHTSF+S+ V P VDDSI+I+I D R+D YR+SGAGGQH+N T S Sbjct: 182 RLVRISPFDAAKRRHTSFASVEVIPEVDDSIQIDIDPKDLRVDVYRSSGAGGQHINKTSS 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PTG+V Q +RSQ +N+ A N LRAKL+ LE +K+ + + + EIGW Sbjct: 242 AVRITHLPTGIVTTSQAQRSQLQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGW 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 G QIRSYV PY +VKDLRT E V+DG L F+ + L Sbjct: 302 GSQIRSYVFHPYNLVKDLRTGHETADAQGVMDGKLQPFIYSYLQW 346 >gi|157693929|ref|YP_001488391.1| peptide chain release factor RF2 [Bacillus pumilus SAFR-032] gi|157682687|gb|ABV63831.1| peptide chain release factor RF2 [Bacillus pumilus SAFR-032] Length = 327 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 164/325 (50%), Positives = 217/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 + W + +A+ ++ E L + ++ E+ + + + +L E+ D + E Sbjct: 1 MSEADFWNDQQKAQGVINEANALKDNVNAYHELSESHEELQMTHDLLKEDYDEELHVELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L+ + + + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+R Sbjct: 61 KELKNLTKQFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P ++ I+I+I D ++DTYRASGAGGQHVNTTDSAVRITHIPT VVV CQ ERSQ Sbjct: 181 DVMPEFNEEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHIPTNVVVTCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A ML++KLY+ +++++ + + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNRERAMKMLKSKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L K Sbjct: 301 TEMGNVQAVMDGDLDSFIDAYLRSK 325 >gi|226225057|ref|YP_002759164.1| peptide chain release factor 2 [Listeria monocytogenes Clip81459] gi|258611946|ref|ZP_05243310.2| peptide chain release factor 2 [Listeria monocytogenes FSL R2-503] gi|293596308|ref|ZP_05230370.2| peptide chain release factor 2 [Listeria monocytogenes FSL J1-194] gi|293596920|ref|ZP_05265609.2| peptide chain release factor 2 [Listeria monocytogenes HPB2262] gi|300764992|ref|ZP_07074980.1| peptide chain release factor 2 [Listeria monocytogenes FSL N1-017] gi|225877519|emb|CAS06233.1| Putative peptide chain release factor 2 [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258607352|gb|EEW19960.1| peptide chain release factor 2 [Listeria monocytogenes FSL R2-503] gi|293583807|gb|EFF95839.1| peptide chain release factor 2 [Listeria monocytogenes HPB2262] gi|293594612|gb|EFG02373.1| peptide chain release factor 2 [Listeria monocytogenes FSL J1-194] gi|300514292|gb|EFK41351.1| peptide chain release factor 2 [Listeria monocytogenes FSL N1-017] gi|332312939|gb|EGJ26034.1| Peptide chain release factor 2 [Listeria monocytogenes str. Scott A] Length = 338 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 169/336 (50%), Positives = 221/336 (65%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 R++ L + DP+ W + A+ ++ E +++ I LEL E Sbjct: 1 MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D + +E +++ + + + +LS D N+A LE+H GAGGTESQDW +MLL Sbjct: 61 EADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLL 120 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RW+EK+ FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS Sbjct: 121 RMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDS 180 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 + RRHTSF S+ V P +DD IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G Sbjct: 181 SGRRHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSG 240 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV CQ ERSQ KN+ QA ML+ KLY+ E +++E + EIGWG QIRSYV Sbjct: 241 IVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFH 300 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E + V+DGDLD+F+ A L + Sbjct: 301 PYSMVKDHRTNYETGNIQAVMDGDLDEFINAYLRSR 336 >gi|290892673|ref|ZP_06555665.1| peptide chain release factor 2 [Listeria monocytogenes FSL J2-071] gi|290557733|gb|EFD91255.1| peptide chain release factor 2 [Listeria monocytogenes FSL J2-071] gi|307572036|emb|CAR85215.1| peptide chain release factor 2 [Listeria monocytogenes L99] Length = 338 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 170/336 (50%), Positives = 221/336 (65%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 R++ L + DP+ W + A+ ++ E +++ I LEL E Sbjct: 1 MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D + +E +++ + + + +LS D N+A LE+H GAGGTESQDW +MLL Sbjct: 61 EADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLL 120 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RW+EK+ FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS Sbjct: 121 RMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDS 180 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 + RRHTSF S+ V P +DD IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G Sbjct: 181 SGRRHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSG 240 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV CQ ERSQ KN+ QA ML+ KLY+ E +++E + EIGWG QIRSYV Sbjct: 241 IVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFH 300 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E + V+DGDLDDF+ A L + Sbjct: 301 PYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 336 >gi|256762748|ref|ZP_05503328.1| peptide chain release factor 2 [Enterococcus faecalis T3] gi|257079206|ref|ZP_05573567.1| peptide chain release factor 2 [Enterococcus faecalis JH1] gi|294779419|ref|ZP_06744820.1| peptide chain release factor 2 [Enterococcus faecalis PC1.1] gi|307269575|ref|ZP_07550914.1| peptide chain release factor 2 [Enterococcus faecalis TX4248] gi|307289302|ref|ZP_07569258.1| peptide chain release factor 2 [Enterococcus faecalis TX0109] gi|256683999|gb|EEU23694.1| peptide chain release factor 2 [Enterococcus faecalis T3] gi|256987236|gb|EEU74538.1| peptide chain release factor 2 [Enterococcus faecalis JH1] gi|294453548|gb|EFG21949.1| peptide chain release factor 2 [Enterococcus faecalis PC1.1] gi|306500011|gb|EFM69372.1| peptide chain release factor 2 [Enterococcus faecalis TX0109] gi|306514195|gb|EFM82771.1| peptide chain release factor 2 [Enterococcus faecalis TX4248] gi|315147459|gb|EFT91475.1| peptide chain release factor 2 [Enterococcus faecalis TX4244] gi|315163916|gb|EFU07933.1| peptide chain release factor 2 [Enterococcus faecalis TX1302] Length = 327 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 170/325 (52%), Positives = 218/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N A+ L+ E L ++ + L + ++ EL EE D I +E Sbjct: 1 MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDTEIQEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + ++ + + LL+ D N+A +E+H GAGGTESQDW +MLLRMYTRWAE Sbjct: 61 ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEI I+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA +ML+AKLY+LE++K+ + A + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L + Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325 >gi|312901832|ref|ZP_07761097.1| peptide chain release factor 2 [Enterococcus faecalis TX0470] gi|311291025|gb|EFQ69581.1| peptide chain release factor 2 [Enterococcus faecalis TX0470] Length = 327 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 170/325 (52%), Positives = 218/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N A+ L+ E L ++ + L + ++ EL EE D I +E Sbjct: 1 MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + ++ + + LL+ D N+A +E+H GAGGTESQDW +MLLRMYTRWAE Sbjct: 61 ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEI I+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQVQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA +ML+AKLY+LE++K+ + A + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L + Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325 >gi|240143320|ref|ZP_04741921.1| peptide chain release factor 2 [Roseburia intestinalis L1-82] gi|257204691|gb|EEV02976.1| peptide chain release factor 2 [Roseburia intestinalis L1-82] gi|291536819|emb|CBL09931.1| bacterial peptide chain release factor 2 (bRF-2) [Roseburia intestinalis M50/1] gi|291539122|emb|CBL12233.1| bacterial peptide chain release factor 2 (bRF-2) [Roseburia intestinalis XB6B4] Length = 338 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 161/324 (49%), Positives = 217/324 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P+ W + + ++ M+E + + + ++ ++ D L+E+ EE+D S++ E Sbjct: 1 MEAPNFWDDPVVSQKKMKELKSMKDDVATYASLKTEFEDIETLIEMGYEENDASLIPEIQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L E + ++LLSGE DS+ A + +HAGAGGTES DWA ML RMYTRWA + Sbjct: 61 EMLDEFTKTYEGIRIKTLLSGEYDSDGAIVSLHAGAGGTESCDWAAMLYRMYTRWASDKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L+ DGEEAGIKS T I G NAYG++K E+GVHRLVRISP+++ +R TSF S Sbjct: 121 FSVEVLDSLDGEEAGIKSITFQINGENAYGYMKSEKGVHRLVRISPFNAAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ +++EI+E D RIDTYR+SGAGGQH+N T SA+RITHIPTG+VVQCQ ERSQ Sbjct: 181 DVMPDIEEDLDVEINEDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK +A ML+AKLY L+ Q+ E A TEIGWG QIRSYV+QPY MVKD RT Sbjct: 241 FQNKDKAMQMLKAKLYLLKQQENAEKAADIRGEVTEIGWGNQIRSYVMQPYTMVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 +E + V+DG +D F+ L Sbjct: 301 VETGNVDSVMDGKIDIFINGYLKW 324 >gi|296268776|ref|YP_003651408.1| peptide chain release factor 2 [Thermobispora bispora DSM 43833] gi|296091563|gb|ADG87515.1| peptide chain release factor 2 [Thermobispora bispora DSM 43833] Length = 378 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 164/352 (46%), Positives = 227/352 (64%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ L + + D D ++++ L + P LW + +A+ + HL ++ I+E Sbjct: 12 ELTGTLRGIQDVLDIDGLRKQIAELEEQAAAPDLWNDPEKAQRVTSRLSHLQGEVNRIEE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + RL D +L ELA EE D L E L ++K ++ + +LLSGE D +A + + Sbjct: 72 LARRLEDLPVLFELAAEEGDQEALAEAERELAKLKSDIGALEVRTLLSGEYDEREALITI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +A AGG ++ DWA MLLRMY RWAE++ + TE + EEAGIKS T +K P AYG L Sbjct: 132 NAQAGGVDAADWAQMLLRMYLRWAERKGYPTEIYDTSYAEEAGIKSVTFTVKAPYAYGTL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE G HRLVRISP+D+ +RR TSF+ + V PVV+ + +IEI+E + RID YR+SG GGQ Sbjct: 192 KGEHGTHRLVRISPFDNQARRQTSFAGVDVMPVVEQTDDIEINEDEIRIDVYRSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PTG+VV CQ ERSQ +N+A A +L+AKL E + Q+ + Sbjct: 252 GVNTTDSAVRITHLPTGIVVSCQNERSQLQNRATAMAVLKAKLLERKRQEEAQAMAELRG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 T WG QIR+YVL PYQ+VKDLRT +E +P+ VLDGDLD F++A + Sbjct: 312 E-TTTSWGTQIRNYVLHPYQIVKDLRTGVESGNPTAVLDGDLDQFIEAEIRW 362 >gi|229545626|ref|ZP_04434351.1| peptide chain release factor RF2 [Enterococcus faecalis TX1322] gi|229549816|ref|ZP_04438541.1| peptide chain release factor RF2 [Enterococcus faecalis ATCC 29200] gi|255972544|ref|ZP_05423130.1| peptide chain release factor 2 [Enterococcus faecalis T1] gi|255975657|ref|ZP_05426243.1| peptide chain release factor 2 [Enterococcus faecalis T2] gi|256619256|ref|ZP_05476102.1| peptide chain release factor 2 [Enterococcus faecalis ATCC 4200] gi|256853316|ref|ZP_05558686.1| peptide chain release factor 2 [Enterococcus faecalis T8] gi|256959169|ref|ZP_05563340.1| peptide chain release factor 2 [Enterococcus faecalis DS5] gi|256964932|ref|ZP_05569103.1| peptide chain release factor 2 [Enterococcus faecalis HIP11704] gi|257084989|ref|ZP_05579350.1| peptide chain release factor 2 [Enterococcus faecalis Fly1] gi|257087047|ref|ZP_05581408.1| peptide chain release factor 2 [Enterococcus faecalis D6] gi|257419489|ref|ZP_05596483.1| peptide chain release factor [Enterococcus faecalis T11] gi|257422371|ref|ZP_05599361.1| peptide chain release factor [Enterococcus faecalis X98] gi|307273028|ref|ZP_07554274.1| peptide chain release factor 2 [Enterococcus faecalis TX0855] gi|307275776|ref|ZP_07556915.1| peptide chain release factor 2 [Enterococcus faecalis TX2134] gi|307277873|ref|ZP_07558957.1| peptide chain release factor 2 [Enterococcus faecalis TX0860] gi|307291799|ref|ZP_07571670.1| peptide chain release factor 2 [Enterococcus faecalis TX0411] gi|312951693|ref|ZP_07770588.1| peptide chain release factor 2 [Enterococcus faecalis TX0102] gi|229305085|gb|EEN71081.1| peptide chain release factor RF2 [Enterococcus faecalis ATCC 29200] gi|229309284|gb|EEN75271.1| peptide chain release factor RF2 [Enterococcus faecalis TX1322] gi|255963562|gb|EET96038.1| peptide chain release factor 2 [Enterococcus faecalis T1] gi|255968529|gb|EET99151.1| peptide chain release factor 2 [Enterococcus faecalis T2] gi|256598783|gb|EEU17959.1| peptide chain release factor 2 [Enterococcus faecalis ATCC 4200] gi|256711775|gb|EEU26813.1| peptide chain release factor 2 [Enterococcus faecalis T8] gi|256949665|gb|EEU66297.1| peptide chain release factor 2 [Enterococcus faecalis DS5] gi|256955428|gb|EEU72060.1| peptide chain release factor 2 [Enterococcus faecalis HIP11704] gi|256993019|gb|EEU80321.1| peptide chain release factor 2 [Enterococcus faecalis Fly1] gi|256995077|gb|EEU82379.1| peptide chain release factor 2 [Enterococcus faecalis D6] gi|257161317|gb|EEU91277.1| peptide chain release factor [Enterococcus faecalis T11] gi|257164195|gb|EEU94155.1| peptide chain release factor [Enterococcus faecalis X98] gi|306497065|gb|EFM66611.1| peptide chain release factor 2 [Enterococcus faecalis TX0411] gi|306505270|gb|EFM74456.1| peptide chain release factor 2 [Enterococcus faecalis TX0860] gi|306507468|gb|EFM76599.1| peptide chain release factor 2 [Enterococcus faecalis TX2134] gi|306510013|gb|EFM79037.1| peptide chain release factor 2 [Enterococcus faecalis TX0855] gi|310630410|gb|EFQ13693.1| peptide chain release factor 2 [Enterococcus faecalis TX0102] gi|315027919|gb|EFT39851.1| peptide chain release factor 2 [Enterococcus faecalis TX2137] gi|315029504|gb|EFT41436.1| peptide chain release factor 2 [Enterococcus faecalis TX4000] gi|315031977|gb|EFT43909.1| peptide chain release factor 2 [Enterococcus faecalis TX0017] gi|315037173|gb|EFT49105.1| peptide chain release factor 2 [Enterococcus faecalis TX0027] gi|315145002|gb|EFT89018.1| peptide chain release factor 2 [Enterococcus faecalis TX2141] gi|315152286|gb|EFT96302.1| peptide chain release factor 2 [Enterococcus faecalis TX0031] gi|315156087|gb|EFU00104.1| peptide chain release factor 2 [Enterococcus faecalis TX0043] gi|315158272|gb|EFU02289.1| peptide chain release factor 2 [Enterococcus faecalis TX0312] gi|315167276|gb|EFU11293.1| peptide chain release factor 2 [Enterococcus faecalis TX1341] gi|315169439|gb|EFU13456.1| peptide chain release factor 2 [Enterococcus faecalis TX1342] gi|315174820|gb|EFU18837.1| peptide chain release factor 2 [Enterococcus faecalis TX1346] gi|323480920|gb|ADX80359.1| peptide chain release factor 2 [Enterococcus faecalis 62] gi|327535327|gb|AEA94161.1| peptide chain release factor RF2 [Enterococcus faecalis OG1RF] Length = 327 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 170/325 (52%), Positives = 218/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N A+ L+ E L ++ + L + ++ EL EE D I +E Sbjct: 1 MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + ++ + + LL+ D N+A +E+H GAGGTESQDW +MLLRMYTRWAE Sbjct: 61 ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEI I+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA +ML+AKLY+LE++K+ + A + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L + Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325 >gi|71908457|ref|YP_286044.1| peptide chain release factor 2 [Dechloromonas aromatica RCB] gi|71848078|gb|AAZ47574.1| bacterial peptide chain release factor 2 (bRF-2) [Dechloromonas aromatica RCB] Length = 325 Score = 267 bits (683), Expect = 2e-69, Method: Composition-based stats. Identities = 163/324 (50%), Positives = 227/324 (70%), Gaps = 1/324 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 EDP +W + A+ L RE++ L+N + ++E+Q L D L ++ E+ D L Sbjct: 1 MEDPKIWDDAKRAQELGREKKSLENIVLVLEEVQSGLNDGRELFDMGKEDGDEDTLLSVE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + ++ +V +F + + +D +LE+ AGAGGTE+QDWA+MLLRMY ++ EK+ Sbjct: 61 ADNAELEKKVAALEFRRMFNNPSDPMPCFLEIQAGAGGTEAQDWASMLLRMYLKYGEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E +E +G+ AG+KSAT+ G AYG L+ E G+HRLVR SP+DSN+RRHTSF+S+ Sbjct: 121 FTVEVMEESEGDVAGLKSATVKFTGDYAYGTLRTETGIHRLVRKSPFDSNARRHTSFTSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 +V+P VDDSIEI I+ +D R DTYRASGAGGQH+N TDSAVR+TH+PTG+VVQCQ +RSQ Sbjct: 181 FVFPEVDDSIEININPADVRTDTYRASGAGGQHINKTDSAVRLTHVPTGIVVQCQNDRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H+N+ +AW MLRA++YE EL+K++ E +K++IGWG QIRSYVL +KDLRTN Sbjct: 241 HRNRDEAWQMLRARIYEFELRKQQAEQQKLEDAKSDIGWGHQIRSYVLD-QSRIKDLRTN 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + VLDGDLD F++A+L Sbjct: 300 HETGNTQAVLDGDLDPFIEASLKQ 323 >gi|261417352|ref|YP_003251035.1| hypothetical protein Fisuc_2973 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373808|gb|ACX76553.1| hypothetical protein Fisuc_2973 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 368 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 144/351 (41%), Positives = 224/351 (63%), Gaps = 1/351 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 ++L +++ L G D + + L L + DP+LW + +A+ +M++ +L I K Sbjct: 11 IELRSRIDKLWGYLDLEAKTEELYVLEKDSGDPNLWNDQEKAQSMMKKIGNLKGLIDSWK 70 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 E+ D L E++ +E+ + ++ +K VE +F+ +L+G D+ + Sbjct: 71 EVSQTCDDLAELYEMSKDEESADLTATLESDIADLKSRVEAMEFKKMLNGPDDACACLMS 130 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +H GAGGTESQDWA ML RMYT + E+ K + ++ + E+AG+KSAT+ + NAYG Sbjct: 131 IHPGAGGTESQDWALMLFRMYTHFFEREKMDFKVVDFQEAEDAGLKSATIEVSCENAYGL 190 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ E GVHRLVRISP+D+N+RRHTSF+++++YP + +E ++ S+ R+DTYR+SGAGG Sbjct: 191 LRSEIGVHRLVRISPFDANARRHTSFTAVYLYP-EHEDVEFDLDMSEVRVDTYRSSGAGG 249 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q++N TDSAVR+TH+PTG++ CQ ERSQ +N+ + ML+ + E + E + Sbjct: 250 QYINKTDSAVRMTHLPTGIMASCQTERSQIQNRETCYKMLKTMVAEHYRLEEEAKRDARM 309 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + K ++ WG QIRSYVLQPYQ+VKDLRT +E + + VLDG + F+ A L Sbjct: 310 AEKKKVEWGSQIRSYVLQPYQLVKDLRTGVETSDTAGVLDGKIKPFIDAYL 360 >gi|319650621|ref|ZP_08004761.1| peptide chain release factor 2 [Bacillus sp. 2_A_57_CT2] gi|317397802|gb|EFV78500.1| peptide chain release factor 2 [Bacillus sp. 2_A_57_CT2] Length = 331 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 168/325 (51%), Positives = 216/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + A++++ E L + ++ + + + EL EE D + + Sbjct: 1 MLQPGFWDDQQAAQVVISESNSLKEQVVEFHDLYETFENLELTYELVKEESDAELQADLE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L+ + + + + LLS E D N+A LE+H GAGGTESQDW +MLLRMYTRWAEK+ Sbjct: 61 EELKDLVKRLNDFELQLLLSEEYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGIKSVTLSIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D IEI+I D +IDTYRASGAGGQH+NTTDSAVRITH+PT VVV CQ ERSQ Sbjct: 181 EVMPEFNDEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNVVVTCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A ML+AKLY+ +++++E + +IGWG QIRSYV PY MVKD RTN Sbjct: 241 IKNRERAMKMLQAKLYQKKIEEQEAELAEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L K Sbjct: 301 TEVGNVQGVMDGDLDMFINAYLRSK 325 >gi|218282777|ref|ZP_03488959.1| hypothetical protein EUBIFOR_01545 [Eubacterium biforme DSM 3989] gi|218216361|gb|EEC89899.1| hypothetical protein EUBIFOR_01545 [Eubacterium biforme DSM 3989] Length = 346 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 151/343 (44%), Positives = 221/343 (64%) Query: 12 GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 FD + +++ + +T +P WQ+ +A+ ++R + L + + +E+ +L Sbjct: 2 SHFDLSSKNKQIEDYDKQTLEPDFWQDQKKAQQVIRAKNALKDIVDRYEELDLQLNSLND 61 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 + E D ++ + + + E + + LLS E D N+A LE+H GAGGTES Sbjct: 62 TADELKSEFDEELMMIAEEEYMDMDKKFENFEIQVLLSHEYDQNNAILEIHPGAGGTESC 121 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+ML RMYTR+AEK FK L+ G+EAGIKS T L++G AYG+LK E+GVHRLV Sbjct: 122 DWASMLYRMYTRYAEKHGFKVTVLDYLPGDEAGIKSVTFLVEGDKAYGYLKSEKGVHRLV 181 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RISP+DS +RRHTSF+S+ V P +D IEI+I D ++T RASGAGGQH+N TDSAVR Sbjct: 182 RISPFDSGARRHTSFASLDVMPQFNDEIEIDIKPEDLIVETKRASGAGGQHINKTDSAVR 241 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 + H PTG+V CQ RSQH+N+ + +L+++LY+LE++++E+ + ++ WG Q Sbjct: 242 MVHKPTGIVATCQNGRSQHENREECLRVLKSRLYQLEIEEQEKKIAQIKGVQSANEWGSQ 301 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IRSYV+ PY +VKD+RT E + VLDGDLD+F+ A L + Sbjct: 302 IRSYVMHPYSLVKDVRTGYETSQVQSVLDGDLDEFIFAYLKSQ 344 >gi|217077931|ref|YP_002335649.1| peptide chain release factor 2 [Thermosipho africanus TCF52B] gi|226739131|sp|B7IE81|RF2_THEAB RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|217037786|gb|ACJ76308.1| peptide chain release factor 2 [Thermosipho africanus TCF52B] Length = 369 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 166/350 (47%), Positives = 237/350 (67%), Gaps = 2/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + ++ + +F +N + L L + D W + +A+ + ++ Q + I +K+ Sbjct: 12 EAKKKFEDIIKVFHPENKRKELEELEKQMGDSDFWSDQRKAREISQKAQRIRKIIDDMKD 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ + D +EL+ E+ + I+ +V+ + E +L+G+ D+++AYL + Sbjct: 72 IEAKFEDLDAAIELSDEDQSFVETIKEMVEE--IEKKVKTFELELILNGKFDASNAYLTI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA+MLLRMY RWAE++ F + ++ GEEAGIKSA + IKG AYG+L Sbjct: 130 HPGAGGTESQDWASMLLRMYMRWAERKGFDVQIVDYQPGEEAGIKSAMIYIKGDYAYGYL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+D+N RRHTSF+S+ V P +DD I+IEI+ D RIDTYRASGAGGQ Sbjct: 190 KYERGVHRLVRISPFDANKRRHTSFASVNVIPEIDDDIDIEINPEDLRIDTYRASGAGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN T+SAVRITHIPTG+VV CQ ERSQ +NK A +L+A+LY+LEL+KR++ + Sbjct: 250 YVNKTESAVRITHIPTGIVVTCQTERSQLQNKETALKVLKARLYQLELEKRQKQLEEIQG 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +I WG QIRSYV QPY MVKD RTN+E + V+DG++D F+++ L Sbjct: 310 ELKDISWGNQIRSYVFQPYTMVKDHRTNVETGNIDAVMDGEIDIFIESEL 359 >gi|297159934|gb|ADI09646.1| peptide chain release factor 2 [Streptomyces bingchenggensis BCW-1] Length = 383 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 160/353 (45%), Positives = 216/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + +L + +E+ Sbjct: 26 LSSTMGSIEAVLDLDKMRADIAVLEEQAAAPSLWDDPENAQKITSRLSYLQGQLRKAEEL 85 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA EDD E L ++ V+ + +LLSGE DS +A + + Sbjct: 86 RSRIDDLEVLFELADAEDDADARAEAVAELDSVRKAVDEMEVRTLLSGEYDSREALVNIR 145 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE + EEAGIKS T ++ P AYG L Sbjct: 146 AEAGGVDAADFAEQLQRMYLRWAERHGYKTEVYDTSYAEEAGIKSTTFAVQIPYAYGTLS 205 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ RID YR+SG GGQ Sbjct: 206 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEKTDHIEIDESELRIDVYRSSGPGGQG 265 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ + + + Sbjct: 266 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMDALKGD 325 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P VLDG+LD F++A + +K Sbjct: 326 GGN-SWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGELDGFLEAGIRWRK 377 >gi|75759027|ref|ZP_00739135.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228903659|ref|ZP_04067779.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 4222] gi|228911012|ref|ZP_04074820.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 200] gi|228968278|ref|ZP_04129276.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar sotto str. T04001] gi|74493493|gb|EAO56601.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228791451|gb|EEM39055.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar sotto str. T04001] gi|228848667|gb|EEM93513.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 200] gi|228855927|gb|EEN00467.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 4222] Length = 326 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 164/325 (50%), Positives = 215/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 W + A+ ++ E L + + +++ + + + EL EE D + +E Sbjct: 1 MMSAGFWDDQQGAQAVINEANALKDMVGSFRQLDETFENLEVTHELLKEEYDEDLHEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR Sbjct: 61 SEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D +EIE+ D +IDTYRASGAGGQHVNTTDSAVRITH PT VV CQ ERSQ Sbjct: 181 EVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG++D F+ A L + Sbjct: 301 TEVGNVQAVMDGEIDPFIDAYLRSR 325 >gi|307297404|ref|ZP_07577210.1| peptide chain release factor 2 [Thermotogales bacterium mesG1.Ag.4.2] gi|306916664|gb|EFN47046.1| peptide chain release factor 2 [Thermotogales bacterium mesG1.Ag.4.2] Length = 370 Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 162/350 (46%), Positives = 230/350 (65%), Gaps = 2/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + + D + ++L + + DP +W + EA L RE Q + I +++ Sbjct: 12 ELKEKFDSIRATLDLERIDEKLKEIEKRMSDPSIWNDQREASNLGREAQSYRSTIELLRD 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +++ I +EL +D S ++ + ++ + +V + LLSGE D N+ ++ + Sbjct: 72 VEEEFESIEIAVEL--SGEDESYVKHVEELVRSAEKKVREFELTILLSGEYDINNCFISI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA+ML+RMY RWAE +FK ++ GEEAGIKS T+ + GP+AYG + Sbjct: 130 HPGAGGTESQDWASMLMRMYMRWAEANRFKITIVDELPGEEAGIKSVTINLAGPHAYGKM 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+N RRHTSF+S+ V+P +D+ EIEI D +IDTYR+ GAGGQ Sbjct: 190 KFEAGVHRLVRISPFDANHRRHTSFASVSVFPEMDEVPEIEIRPEDLKIDTYRSGGAGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVRITH+PTG+VV CQ ERSQH+NKA A ML AKL+E+E++K+ Sbjct: 250 HVNKTDSAVRITHLPTGIVVACQTERSQHQNKANAMKMLYAKLFEIEIEKKRSEKLKLMG 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + EI WG QIRSYV QPY +VKD RT+ E V++G++D+F++ L Sbjct: 310 DQKEISWGNQIRSYVFQPYTLVKDHRTDFETGDIQSVMNGEIDEFIEKEL 359 >gi|320528516|ref|ZP_08029673.1| peptide chain release factor 2 [Solobacterium moorei F0204] gi|320131102|gb|EFW23675.1| peptide chain release factor 2 [Solobacterium moorei F0204] Length = 350 Score = 267 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 152/340 (44%), Positives = 214/340 (62%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 LFD + +RL+ N + W + +A+ ++RE L I + D + Sbjct: 4 LFDLEGKEKRLAENNALMAEADFWNDQKKAQKIIRESNQLKVLIETHHSLTDSFAELSEG 63 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + S+ + E + + LLSG D++++ LE+H GAGGTE+ D Sbjct: 64 IGELSSSFDEDMNELISEEYTETMKKFEEFEIQVLLSGPYDNHNSILEIHPGAGGTEAMD 123 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA ML RMY RWAE++ FK E ++ +GEEAG+KS ++LI+GP AYG+LK E GVHRLVR Sbjct: 124 WAAMLYRMYMRWAERKGFKIELMDYQEGEEAGMKSCSVLIQGPMAYGYLKAENGVHRLVR 183 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+DSN+RRHTSF+S+ + P +D +EIEI + D I T RASGAGGQH+N TDSAVR+ Sbjct: 184 ISPFDSNARRHTSFASVEIMPEFEDDLEIEIDDKDLDIITMRASGAGGQHINKTDSAVRM 243 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 THIP+G+ V CQ +RSQ +N+ NML++KL +L++++ EE A WG QI Sbjct: 244 THIPSGITVFCQSQRSQIQNREACLNMLKSKLLQLKIRENEERAAAVRGEVKANEWGSQI 303 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 RSYV PY MVKDLRT E + V+DG++D F+ + L Sbjct: 304 RSYVFAPYTMVKDLRTGHEAGNVQAVMDGEIDGFIDSYLR 343 >gi|242129269|gb|ACS83718.1| peptide chain release factor 2 [uncultured bacterium AOCefta2] Length = 367 Score = 267 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 163/344 (47%), Positives = 219/344 (63%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD L ++ W + A+ +++ L + + D+L Sbjct: 18 RSIFDVAGKRVDAERLEAESAAGDFWNDNQRAQEHLKKLTALKRVVEPWDALDRDTSDSL 77 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + E+ E D S+ E + + +F+S+LS D +D++L +H GAGGTES Sbjct: 78 EMAEMLKAEGDESMAPELEKQAAELAQRLNDLEFKSMLSEAEDVSDSFLHIHPGAGGTES 137 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWANMLLRMYTRWAE++ FK E +++ GE AGI TL ++G A+G+LK E GVHRL Sbjct: 138 CDWANMLLRMYTRWAERKGFKVELIDLQPGEGAGISRVTLAVRGEYAFGYLKAESGVHRL 197 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+D+N RRHTSF+S+ Y V D IE+EI + D RIDTYR+SGAGGQHVN TDSAV Sbjct: 198 VRISPFDANKRRHTSFASVHAYAEVTDDIEVEILDKDLRIDTYRSSGAGGQHVNVTDSAV 257 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIPT +VV CQ ERSQHKNKA A +LR++LY+L ++RE K +I WG Sbjct: 258 RITHIPTKIVVSCQNERSQHKNKATAMKVLRSRLYQLYKEQREADQAAKAGEKKDISWGS 317 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QIRSYV QPYQMVKDLRT++E ++ V+DG +D F++A L + Sbjct: 318 QIRSYVFQPYQMVKDLRTDVETSNIGAVMDGAIDPFIEAFLRSQ 361 >gi|218291021|ref|ZP_03495062.1| peptide chain release factor 2 [Alicyclobacillus acidocaldarius LAA1] gi|218239039|gb|EED06244.1| peptide chain release factor 2 [Alicyclobacillus acidocaldarius LAA1] Length = 342 Score = 267 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 165/326 (50%), Positives = 225/326 (69%), Gaps = 1/326 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + A+ ++ E + + + ++ ++ L D + L+LA EEDD + E + Sbjct: 1 MAAPDFWDDPDRAQKIISEMNGVKSVVDTMRRLESLLQDAEVALQLAQEEDDHDLFAEAN 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +++K E++ + + +LSGE D N+A LE+H GAGGTESQDWA+MLLRMYTRWAE Sbjct: 61 RLAEQLKSEMDEFELQVMLSGEYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEDHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K E L+ GEEAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF+S+ Sbjct: 121 YKVEVLDYLPGEEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFASV 180 Query: 210 WVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P + +D IEI + RIDTYR++GAGGQHVNTTDSAVRITHIPTG+VV CQ ERS Sbjct: 181 DVIPEIAEDDDSIEIRPEELRIDTYRSTGAGGQHVNTTDSAVRITHIPTGIVVTCQSERS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q +N+A+A +L+++L ++RE+ + EI WG QIRSYV PY +VKD RT Sbjct: 241 QIQNRARAMEILKSRLAAKRREEREQELAQLRGEQKEIAWGSQIRSYVFHPYSLVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354 N E ++ V+DG++D F+ A L + Sbjct: 301 NYETSNTQAVMDGEIDPFIHAYLRWQ 326 >gi|227518951|ref|ZP_03949000.1| peptide chain release factor RF2 [Enterococcus faecalis TX0104] gi|227553571|ref|ZP_03983620.1| peptide chain release factor RF2 [Enterococcus faecalis HH22] gi|256961736|ref|ZP_05565907.1| peptide chain release factor 2 [Enterococcus faecalis Merz96] gi|293383442|ref|ZP_06629355.1| peptide chain release factor 2 [Enterococcus faecalis R712] gi|293388904|ref|ZP_06633389.1| peptide chain release factor 2 [Enterococcus faecalis S613] gi|312907729|ref|ZP_07766720.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 512] gi|312910347|ref|ZP_07769194.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 516] gi|227073640|gb|EEI11603.1| peptide chain release factor RF2 [Enterococcus faecalis TX0104] gi|227177301|gb|EEI58273.1| peptide chain release factor RF2 [Enterococcus faecalis HH22] gi|256952232|gb|EEU68864.1| peptide chain release factor 2 [Enterococcus faecalis Merz96] gi|291079233|gb|EFE16597.1| peptide chain release factor 2 [Enterococcus faecalis R712] gi|291081685|gb|EFE18648.1| peptide chain release factor 2 [Enterococcus faecalis S613] gi|310626757|gb|EFQ10040.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 512] gi|311289620|gb|EFQ68176.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 516] gi|315576028|gb|EFU88219.1| peptide chain release factor 2 [Enterococcus faecalis TX0309B] gi|315580603|gb|EFU92794.1| peptide chain release factor 2 [Enterococcus faecalis TX0309A] Length = 327 Score = 267 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 169/325 (52%), Positives = 218/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N A+ L+ E L ++ + + + ++ EL EE D I +E Sbjct: 1 MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEEIDELTVMFELQQEEYDAEIQEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + ++ + + LL+ D N+A +E+H GAGGTESQDW +MLLRMYTRWAE Sbjct: 61 ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEI I+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA +ML+AKLY+LE++K+ + A + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L + Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325 >gi|257090077|ref|ZP_05584438.1| peptide chain release factor [Enterococcus faecalis CH188] gi|312903512|ref|ZP_07762692.1| peptide chain release factor 2 [Enterococcus faecalis TX0635] gi|256998889|gb|EEU85409.1| peptide chain release factor [Enterococcus faecalis CH188] gi|310633388|gb|EFQ16671.1| peptide chain release factor 2 [Enterococcus faecalis TX0635] gi|315162421|gb|EFU06438.1| peptide chain release factor 2 [Enterococcus faecalis TX0645] gi|315577792|gb|EFU89983.1| peptide chain release factor 2 [Enterococcus faecalis TX0630] Length = 327 Score = 267 bits (681), Expect = 3e-69, Method: Composition-based stats. Identities = 170/325 (52%), Positives = 218/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N A+ L+ E L ++ + L + ++ EL EE D I +E Sbjct: 1 MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + ++ + + LL+ D N+A +E+H GAGGTESQDW +MLLRMYTRWAE Sbjct: 61 ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEI I+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA +ML+AKLY+LE++K+ + A + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L + Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325 >gi|329571835|gb|EGG53513.1| peptide chain release factor 2 [Enterococcus faecalis TX1467] Length = 327 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 169/325 (52%), Positives = 217/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N A+ L+ E L ++ + L + ++ EL EE D I +E Sbjct: 1 MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDTEIQEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + ++ + + LL+ D N+A +E+H GAGGTESQDW +MLLRMYTRWAE Sbjct: 61 ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRI P+DS RRHTSF S+ Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRILPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEI I+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA +ML+AKLY+LE++K+ + A + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L + Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325 >gi|118602328|ref|YP_903543.1| peptide chain release factor 2 [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567267|gb|ABL02072.1| bacterial peptide chain release factor 2 (bRF-2) [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 364 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 167/351 (47%), Positives = 231/351 (65%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ L + RL + + E+P++W N +A++L +E+ L + K++ Sbjct: 13 LKQRTIVLLTHISLEKKQARLEEVLLEMENPNIWTNPDQAQVLGQEKSKLTSICQTFKQV 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LL +A E+D + D+L I+ +E +FE + SG+ D N AYL++ Sbjct: 73 NSVLEDAQELLNMAQTENDEDTANDIIDDLDTIQSSIEKLEFERMFSGDLDVNSAYLDIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +G+GGTE+QDWA M+LRMY RW EK FK + +E GE GIKSAT+ G A+GWL+ Sbjct: 133 SGSGGTEAQDWAEMVLRMYLRWGEKHNFKVKLMETSAGEVTGIKSATIHFDGKYAFGWLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+++N +RHTSF S++V P VD+ I+I+I+ D R+DTYRASGAGGQH Sbjct: 193 TEIGIHRLVRKSPFNANGKRHTSFCSVFVSPEVDNDIDIDINPLDLRVDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH+PT ++VQCQ RSQ NK QA L++KLYELE+QKR E Sbjct: 253 VNKTESAVRITHLPTNIIVQCQDGRSQRANKDQAMKQLKSKLYELEIQKRNAEKQSLEDK 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K+ IGWG QIRSYVL +KDLRT +E T+ +DVLDG+LD F++A+L Sbjct: 313 KSNIGWGHQIRSYVLD-QSRIKDLRTGVESTNTNDVLDGNLDQFIEASLKA 362 >gi|291087933|ref|ZP_06347924.2| peptide chain release factor 2 [Clostridium sp. M62/1] gi|291073455|gb|EFE10819.1| peptide chain release factor 2 [Clostridium sp. M62/1] Length = 343 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 157/333 (47%), Positives = 225/333 (67%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 +R+ L+ E+P W + + LMRE ++L + + ++++ D ++LE+ EE+ Sbjct: 2 KRIDELDKSMEEPGFWDDPEMSTRLMREAKNLKDTVESYRKLEQEYEDIQVMLEMGYEEN 61 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D S++ E + ++E + ++LLSGE D+N+A L+++AGAGGTE+ DW +ML RM Sbjct: 62 DPSLIPEIQGMMDDFVEKLEAIRIQTLLSGEYDNNNAILKLNAGAGGTEACDWCSMLYRM 121 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y RWA+K+ F T ++ DGEEAGIKS TL I G NAYG+LK E+GVHRLVRISP++S Sbjct: 122 YQRWADKKGFTTAVIDYLDGEEAGIKSITLQINGENAYGFLKSERGVHRLVRISPFNSAG 181 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 +R TSF S V P + + +++EI+ + RIDTYR+SGAGGQH+N T SA+RITH+PTG+V Sbjct: 182 KRQTSFVSCDVMPDIKEDLDVEINPDELRIDTYRSSGAGGQHINKTSSAIRITHLPTGIV 241 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 VQCQ ERSQ +NK A ML+ KLY L+ ++ E + +I +G QIRSYV+QPY Sbjct: 242 VQCQNERSQFQNKEVAMQMLKTKLYMLKQEEHAEKLSDIRGDVKDINFGNQIRSYVMQPY 301 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +VKD RT E + + VLDGD+D F+ A L Sbjct: 302 TLVKDHRTGAESGNVNAVLDGDIDLFISAYLKW 334 >gi|294102045|ref|YP_003553903.1| hypothetical protein Amico_1055 [Aminobacterium colombiense DSM 12261] gi|293617025|gb|ADE57179.1| hypothetical protein Amico_1055 [Aminobacterium colombiense DSM 12261] Length = 368 Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats. Identities = 163/354 (46%), Positives = 219/354 (61%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + L D ++ L KT P W EA+ + +E + + K+ Sbjct: 12 ELRSLKDELQESLDLPILEIKIQELEEKTLKPDFWG-SDEARKVTQELARYQDKLDSWKK 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I + D I+ E+ EE+D + ++ +K E+E +Q LLS + D +A + V Sbjct: 71 IAEDYEDLEIIEEMLKEEEDRELQKDFEQKAFSLKKEIERQQLIELLSEDYDQGNAIVSV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAG+GG +SQDWA ML RMY RW E+ F+ + L++ E GI + TLL++G AYG+L Sbjct: 131 HAGSGGLDSQDWAEMLYRMYARWMEQNDFRVKVLDLIKDSEGGISNVTLLVEGSYAYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+DS RRHTSF+S+ + P + + +IEI D RIDTYR+SGAGGQ Sbjct: 191 KSEKGVHRLVRISPFDSAGRRHTSFASVDIVPELPEDEDIEIRTEDLRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVRITH P+G+VV CQ ERSQH NKA A +L++KLYE +++R + Sbjct: 251 HVNMTDSAVRITHFPSGIVVSCQNERSQHMNKAVAMQVLKSKLYERAIEERRNEMDTIIG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K EI WG QIRSYVL PY +VKD RT E + VLDGD+DDF+ A L KK Sbjct: 311 EKKEISWGSQIRSYVLHPYTLVKDHRTGEETGNVQAVLDGDIDDFIMAYLRWKK 364 >gi|328882777|emb|CCA56016.1| Peptide chain release factor 2 [Streptomyces venezuelae ATCC 10712] Length = 367 Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats. Identities = 161/353 (45%), Positives = 220/353 (62%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D + ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMGSIEAVLDLEKLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAETL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA E DD L E L ++ ++ + +LLSGE D +A + + Sbjct: 73 RGRIDDLAVLFELAEEMDDPDTLAEAEAELTSVRKALDEMEVRTLLSGEYDEREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ + TE E EEAGIKS T ++K P AYG L Sbjct: 133 AEAGGVDASDFAERLQRMYLRWAERHGYSTEVYETSYAEEAGIKSTTFVVKAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + + PVV+ S +EI ES+ R+D YRASG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVESSDHVEIDESELRVDVYRASGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A N+L+AKL LE Q++EE A + Sbjct: 253 VNTTDSAVRITHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERQRQEERAKMDALK 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQMVKDLRT E +P VLDG++D F++A + +K Sbjct: 311 DSGSSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQSVLDGEIDGFLEAGIRWRK 363 >gi|167462917|ref|ZP_02328006.1| peptide chain release factor 2 in translation [Paenibacillus larvae subsp. larvae BRL-230010] gi|322383023|ref|ZP_08056853.1| peptide chain release factor 2-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153046|gb|EFX45506.1| peptide chain release factor 2-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 332 Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats. Identities = 166/325 (51%), Positives = 223/325 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + +A+ + E + ++ + + D ++ +LA EEDD S+ E + Sbjct: 1 MAAPDFWDDQEKAQKTIAELNAIKGSVEQFQALSSEFGDIEVMAQLAEEEDDESLAAEVA 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++++ I ++E + + LLS D +A LE+H GAGGTESQDWA MLLRMY RWAEK Sbjct: 61 ESIKGIVGKLEGFELQLLLSQPYDRLNAILELHPGAGGTESQDWAEMLLRMYRRWAEKHD 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S Sbjct: 121 FKVEVLDYLPGDEAGVKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD +++EI D +IDTYRASGAGGQH+NTTDSAVRITHIPTG+VV CQ ERSQ Sbjct: 181 DVVPEIDDDVDVEIRSEDLKIDTYRASGAGGQHINTTDSAVRITHIPTGIVVTCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A +LR+KLYE +++++E+ +++I WG QIRSYV PY MVKD RT+ Sbjct: 241 IKNRERAMKLLRSKLYEKKIEEQEKHLAEIRGEQSDIAWGSQIRSYVFHPYSMVKDHRTS 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L + Sbjct: 301 AETGNAGAVMDGDLDMFIDAYLRQQ 325 >gi|257416283|ref|ZP_05593277.1| peptide chain release factor 2 [Enterococcus faecalis AR01/DG] gi|257158111|gb|EEU88071.1| peptide chain release factor 2 [Enterococcus faecalis ARO1/DG] Length = 327 Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats. Identities = 170/325 (52%), Positives = 218/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N A+ L+ E L ++ + L + ++ EL EE D I +E Sbjct: 1 MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + ++ + + LL+ D N+A +E+H GAGGTESQDW +MLLRMYTRWAE Sbjct: 61 ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEI I+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ Sbjct: 181 DVMPELDDTIEIAINLDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA +ML+AKLY+LE++K+ + A + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L + Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325 >gi|149183327|ref|ZP_01861766.1| peptide chain release factor 2 [Bacillus sp. SG-1] gi|148848954|gb|EDL63165.1| peptide chain release factor 2 [Bacillus sp. SG-1] Length = 327 Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats. Identities = 168/325 (51%), Positives = 220/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + +A+ ++ E L ++ K++Q+ + + LEL EE+D + +E Sbjct: 1 MLQPDFWNDQQQAQGVINEANGLKELVNEYKDMQEMQENLEVTLELVKEENDAELQEELV 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + + + + + LLS D N+A LE+H GAGGTESQDW +MLLRMY RWAEK+ Sbjct: 61 EETKDLNKRLNEYELQLLLSEPHDKNNAILELHPGAGGTESQDWGSMLLRMYQRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P ++ IEI+I D +IDTYRASGAGGQH+NTTDSAVRITH PTGVVV CQ ERSQ Sbjct: 181 EVMPEFNEEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHQPTGVVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML+AKLY+ ++++E+ + +IGWG QIRSYV PY MVKD RTN Sbjct: 241 IKNREQAMKMLKAKLYQKRIEEQEQELAEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGD++ F+ A L + Sbjct: 301 TEMGNVQAVMDGDINGFINAYLRSR 325 >gi|291531340|emb|CBK96925.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium siraeum 70/3] Length = 370 Score = 266 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 166/347 (47%), Positives = 230/347 (66%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L L G D DN ++ L ++ P W +V ++ + ++ N + +++++ Sbjct: 18 LKELAGALDLDNLKTEIAKLEEQSAQPDFWNDVENSQKISQKIGEDKNIVQSYEKLRESY 77 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D + +LELA EEDD S+L E + + + E+E ++ +LLSGE D N+A L HAGAG Sbjct: 78 DDVMTMLELAQEEDDESMLPEIQELAKHFRTELESQKLATLLSGEFDHNNAILTFHAGAG 137 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW ML RMY WAE+ K L+ DGEEAGIKSA++L++G NAYG+LK E G Sbjct: 138 GTEAQDWVEMLYRMYNHWAEQHGMKVTVLDYLDGEEAGIKSASILVEGRNAYGYLKSENG 197 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR+SP+DS+ RRHTSF+S+ V P +++ I+IEISE + ++D YRASGAGGQ VN T Sbjct: 198 VHRLVRVSPFDSSGRRHTSFASVEVMPEINEDIDIEISEDEIKMDVYRASGAGGQKVNKT 257 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVRITHIPTG+V CQ ERSQH+N+ A ML++KL E++ ++ + + + + +I Sbjct: 258 SSAVRITHIPTGIVCACQTERSQHQNREYAMRMLKSKLLEIKEREHLDKISDIKGEQLQI 317 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYV PY MVKD RT E + V+DGDLD F+ A L Sbjct: 318 AWGAQIRSYVFMPYTMVKDHRTGYEMGNIGAVMDGDLDGFINAYLKA 364 >gi|254468217|ref|ZP_05081623.1| peptide chain release factor 2 [beta proteobacterium KB13] gi|207087027|gb|EDZ64310.1| peptide chain release factor 2 [beta proteobacterium KB13] Length = 351 Score = 266 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 168/343 (48%), Positives = 239/343 (69%), Gaps = 1/343 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 G +FD DN ++L L + EDP +W++ ++ + +E++ L++ I +++ + +N Sbjct: 8 GAIFDLDNKKEQLKELTRQQEDPKIWEDHSLSQKIGKEKRILEDTIQEFEQLNSGIENNK 67 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L +LA EE D S L + + + ++ +F+ + S D N+ +++ +G+GGTE+ Sbjct: 68 ELFDLAFEESDDSTLNDLFQDTINLDKKLGQLEFKRMFSNPLDPNNCFIDFQSGSGGTEA 127 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWANMLLRMY R+ E++ FK E +EI +GE AGIK AT+ I G AYG+ + E G+HRL Sbjct: 128 QDWANMLLRMYLRYCEEKGFKVEVMEITEGEVAGIKGATIKIIGDYAYGYFRTETGIHRL 187 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP+DS SRRHTSF+ + VYP +D+S+EI+I+ +D RIDTYRASGAGGQH+N TDSAV Sbjct: 188 VRKSPFDSGSRRHTSFAGVNVYPEIDESVEIDINPADLRIDTYRASGAGGQHINKTDSAV 247 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH P+GVVVQCQ +RSQH+NKAQA +ML+A+LY +EL KR E E +K++IGWG Sbjct: 248 RITHEPSGVVVQCQNDRSQHRNKAQAMDMLKAQLYRIELDKRNEEKQAMEDAKSDIGWGH 307 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVL +KDLRT +E + VLDG+LD F+ +L Sbjct: 308 QIRSYVLD-QSRIKDLRTGVEVGNTQGVLDGNLDPFITESLKQ 349 >gi|297626158|ref|YP_003687921.1| peptide chain release factor 2 (RF-2) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921923|emb|CBL56483.1| Peptide chain release factor 2 (RF-2) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 369 Score = 266 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 159/354 (44%), Positives = 222/354 (62%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L++ L+ + + D +++ L T+ P LW + A+ + L +++ ++ Sbjct: 12 QLNKSLSSIEAVVDVPAKNKQIEELETEASAPDLWNDQEHAQSVTSRLSRLQSSVEKVQT 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D LLELA EE D QE + + E++ + ++LLSGE D DA + + Sbjct: 72 LRSRLDDASTLLELASEESDADTAQEAEKEIATLADEIDTLEVQTLLSGEYDERDALVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 + AGG ++ D+A MLLRMY RWAE+ + E +I EEAGIKSAT +K P AYG L Sbjct: 132 RSEAGGVDAADFAAMLLRMYERWAERHAYSYEVYDISYAEEAGIKSATFTVKSPYAYGTL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ I+I E D R+D + ASG GGQ Sbjct: 192 SVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDNIDIPEKDIRVDVFHASGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA +L+AKL E Q+RE + +S Sbjct: 252 GVNTTDSAVRITHLPTGIVVTCQNERSQIQNKAAGLRVLQAKLLERARQEREAEMDALKS 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E SP +V DGD+D F++ + ++ Sbjct: 312 DGN--SWGSQMRSYVLHPYQMVKDLRTGFESGSPDNVFDGDIDGFIERGIRWRR 363 >gi|239618275|ref|YP_002941597.1| peptide chain release factor 2 [Kosmotoga olearia TBF 19.5.1] gi|259585228|sp|C5CGS4|RF2_KOSOT RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|239507106|gb|ACR80593.1| peptide chain release factor 2 [Kosmotoga olearia TBF 19.5.1] Length = 370 Score = 266 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 171/350 (48%), Positives = 227/350 (64%), Gaps = 2/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + D D ++LS + + DP +W + A L ++ Q L + + + + Sbjct: 12 ELRDKFENIKTTVDVDKIKEKLSRIEKELSDPSVWSDQRRAGKLGQQAQALRSQLDLLNK 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +Q+ + I +EL+ E++ + V+ + LLS D+ +AYL V Sbjct: 72 VQELFENIDIAVELSEEDESYLENLNELLKEA--EDMVKEFELNILLSSPYDAYNAYLSV 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA+MLLRMY RWAE+ +K +E GEEAGIKSAT+ I GP AYG L Sbjct: 130 HPGAGGTESQDWASMLLRMYIRWAERNNYKVTTIEEQPGEEAGIKSATINIAGPYAYGKL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+N RRHTSF+S+ V+P +DD +EI+I D +IDTYRA GAGGQ Sbjct: 190 KYEAGVHRLVRISPFDANHRRHTSFASVSVFPEMDDDVEIDIRPEDLKIDTYRAGGAGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPTG+VV CQ ERSQH+NKA A +L+AKL+ELEL+K+ + Sbjct: 250 HVNRTESAVRITHIPTGIVVTCQNERSQHQNKATAMKILKAKLFELELEKKRQEKMKLMG 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + +I WG QIRSYV QPY MVKD RTN E V+DG +DDF++ L Sbjct: 310 EQKDIAWGNQIRSYVFQPYTMVKDHRTNYETGDVQAVMDGYIDDFIEKEL 359 >gi|154250427|ref|YP_001411252.1| peptide chain release factor 2 [Fervidobacterium nodosum Rt17-B1] gi|154154363|gb|ABS61595.1| peptide chain release factor 2 [Fervidobacterium nodosum Rt17-B1] Length = 364 Score = 266 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 166/350 (47%), Positives = 238/350 (68%), Gaps = 2/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++ + + +F ++ ++L L ++T P W + +A+ + RE Q + + +++ Sbjct: 7 ELKKKYDDIIEVFHPEDKKEKLKELESETLKPDFWNDQKKAQQINREIQRIRRIVEDMEK 66 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ D + +ELA E+ E + K+ + +L+G+ D ++AYL + Sbjct: 67 IKVLFEDIEVGIELAEEDPSMQEHLEQIVDEVGEKI--REFELALILNGKFDGSNAYLSI 124 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA+MLLRMY RWAE++ F E ++ +GEEAGIKSATL IKG AYG+L Sbjct: 125 HPGAGGTESQDWASMLLRMYMRWAERKGFSVELVDYQEGEEAGIKSATLYIKGDFAYGYL 184 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+D+N RRHTSF+S+ V P ++D I+IEI D R+DTYRASGAGGQ Sbjct: 185 KYERGVHRLVRISPFDANKRRHTSFASVNVLPEIEDDIDIEIRPEDLRVDTYRASGAGGQ 244 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN T+SA+RITH+PTG+VV CQ ERSQ +N+ A ML+A+LY+LEL+KR + + Sbjct: 245 YVNKTESAIRITHLPTGIVVTCQTERSQLQNRETAMKMLKARLYQLELEKRRKQIEQIQG 304 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +I WG QIRSYV QPY MVKD RT++E + V+DG++D F++A L Sbjct: 305 ELRDISWGNQIRSYVFQPYTMVKDHRTDVETGNIEAVMDGEIDMFIEAEL 354 >gi|303229877|ref|ZP_07316653.1| peptide chain release factor 2 [Veillonella atypica ACS-134-V-Col7a] gi|303232076|ref|ZP_07318779.1| peptide chain release factor 2 [Veillonella atypica ACS-049-V-Sch6] gi|302513182|gb|EFL55221.1| peptide chain release factor 2 [Veillonella atypica ACS-049-V-Sch6] gi|302515433|gb|EFL57399.1| peptide chain release factor 2 [Veillonella atypica ACS-134-V-Col7a] Length = 330 Score = 266 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 165/325 (50%), Positives = 227/325 (69%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W N +A+ + +E L N++ K++ + D ++L++A+EE+D S+ E Sbjct: 1 MSDPTFWDNPDKAREISQEATQLKNSVEGYKQLVSDIEDASVMLDMAIEEEDTSMEGEIK 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + I+ VE ++ LL GE D N+A L HAGAGGTE+QDW +ML+RMY RWAEK Sbjct: 61 QFVNGIQEAVEKQEVLLLLGGEYDQNNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKTG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E ++ G+EAGIKSAT LIKG NA+G+LK E+GVHRLVRISP+D+ +RRHTSF+++ Sbjct: 121 FSVELMDEQPGDEAGIKSATFLIKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD++EI I D ++DTYRASGAGGQH+N TDSAVR+TH PTG+VVQCQ +RSQ Sbjct: 181 DVMPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQSQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ QA +LRAKL+ELEL+K+ E+ + I WG QIRSYV PY MVKD RT+ Sbjct: 241 MQNREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNMVKDHRTS 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DG++D F++ L + Sbjct: 301 VETGNVQAVMDGNIDQFIEGYLKKE 325 >gi|312126885|ref|YP_003991759.1| hypothetical protein Calhy_0649 [Caldicellulosiruptor hydrothermalis 108] gi|311776904|gb|ADQ06390.1| hypothetical protein Calhy_0649 [Caldicellulosiruptor hydrothermalis 108] Length = 370 Score = 266 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 171/349 (48%), Positives = 233/349 (66%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 L + D D L L ++T P WQ++ ++ ++++ + L + I +++ Sbjct: 13 EEDLKEMRVSLDIDRLESELKSLESETSRPDFWQDLENSQKVLQKIKRLKDKIERFQKLY 72 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D +L EL+LEE + + +E L ++ ++E + E LL+G D N+A L +HA Sbjct: 73 SQWEDLKVLTELSLEEGNHEMAEELEKELLDLERKIEDFKIEVLLNGPYDKNNAILSIHA 132 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+QDWA MLLRMYTRWA K+ +K E L+I GEEAGIK+ T+ I G NAYG+LK Sbjct: 133 GAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTVRIVGENAYGYLKA 192 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+D+ RRHTSF+++ V P V+D +IEI E D IDT+RASGAGGQHV Sbjct: 193 EKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTFRASGAGGQHV 252 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRI HIPTG+VV CQ ERSQHKN+ A +L+AKL EL+ ++R E + + Sbjct: 253 NKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQ 312 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 TEIGWG QIRSYV PY +VKD RT E + V+DG++D F+ A L Sbjct: 313 TEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 361 >gi|302534760|ref|ZP_07287102.1| peptide chain release factor 2 [Streptomyces sp. C] gi|302443655|gb|EFL15471.1| peptide chain release factor 2 [Streptomyces sp. C] Length = 369 Score = 266 bits (679), Expect = 4e-69, Method: Composition-based stats. Identities = 162/353 (45%), Positives = 218/353 (61%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMGSIEAVLDLDKLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTETL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA E DD L E L ++ ++ + +LLSGE +A + + Sbjct: 73 RGRIDDLAVLFELAQEMDDADTLAEAEAELVSVRKALDEMEVRTLLSGEYAEREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ + TE E EEAGIKS T ++K P AYG L Sbjct: 133 AEAGGVDASDFAERLQRMYLRWAERHGYPTEIYETSYAEEAGIKSTTFVVKAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ S +EI ES+ R+D YRASG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVETSDHVEIDESELRVDVYRASGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV CQ ERSQ +NKA A N+L+AKL LE +++EE A + Sbjct: 253 VNTTDSAVRITHIPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQARMDALK 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P VLDG++D F++A + +K Sbjct: 311 DGGSSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLEAGIRWRK 363 >gi|114798643|ref|YP_760613.1| peptide chain release factor 2, programmed frameshift [Hyphomonas neptunium ATCC 15444] gi|123128746|sp|Q0C0Y0|RF2_HYPNA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|114738817|gb|ABI76942.1| peptide chain release factor 2, programmed frameshift [Hyphomonas neptunium ATCC 15444] Length = 368 Score = 266 bits (679), Expect = 5e-69, Method: Composition-based stats. Identities = 201/352 (57%), Positives = 249/352 (70%), Gaps = 2/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ L DWD A +RL L +E P+ W + EA+ +MRERQ L + I+ ++ Sbjct: 11 KIESSAALLRRRLDWDTATKRLDELTALSERPNFWDDPQEAQAMMRERQKLADGIALVQT 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ + D L+ELA + E + + +LLSGEAD ND YL++ Sbjct: 71 LEKDVADAPELMELAEGDASMLADLEATLRRAAARAAEAEL--AALLSGEADGNDCYLQI 128 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AG GGTESQDWA++L RMY RWAEKR + E L+ DGEEAGIKSATL IKG NAYGWL Sbjct: 129 NAGEGGTESQDWASILRRMYVRWAEKRGYGVELLDERDGEEAGIKSATLQIKGENAYGWL 188 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K EQGVHRLVRISP+DS++RRHTSFSS+ V PV+DD I++EI+ SD R DTYRASGAGGQ Sbjct: 189 KSEQGVHRLVRISPFDSSARRHTSFSSVAVSPVIDDKIDVEINPSDVRTDTYRASGAGGQ 248 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVR+THIPT VVQCQ RSQH+N+ +AW MLR+KLYELELQKR +A+ + Sbjct: 249 HVNRTDSAVRLTHIPTNTVVQCQAGRSQHQNRDEAWKMLRSKLYELELQKRRAVADAQYA 308 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K+ IG+G QIRSYVLQPYQMVKDLRT +E + S VLDGD+D F+ A LA Sbjct: 309 DKSAIGFGHQIRSYVLQPYQMVKDLRTEVETSDTSGVLDGDIDRFLSAALAA 360 >gi|313837551|gb|EFS75265.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA2] gi|314927570|gb|EFS91401.1| peptide chain release factor 2 [Propionibacterium acnes HL044PA1] gi|314972490|gb|EFT16587.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA3] gi|328907839|gb|EGG27602.1| peptide chain release factor 2 [Propionibacterium sp. P08] Length = 371 Score = 266 bits (679), Expect = 5e-69, Method: Composition-based stats. Identities = 153/353 (43%), Positives = 220/353 (62%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L+ + + D + ++ L + P+LW + A+ + L I ++ + Sbjct: 16 LDASLSSIENVLDPEAKKAEIADLEKQVAAPNLWDDQENAQWVTSRLSALQAEIERLERL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +LLE A +DD L E + +++ E++ + LLSG+ D +A + + Sbjct: 76 RARIEDVHVLLEFATADDDKESLTEATSETVKLREEIDALEVRILLSGQYDEREAVVTIR 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A MLLRMY RWAE+ +K E L+ EEAGIKSAT ++ P +YG L Sbjct: 136 SEAGGVDAADFAEMLLRMYLRWAERHGYKVEILDTSYAEEAGIKSATFVVHAPFSYGTLS 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ ++I ESD R+D + ASG GGQ Sbjct: 196 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A +L+AKL E +++E N +S Sbjct: 256 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSE 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRTN E + V DGD+DDF+ A + ++ Sbjct: 316 GN--SWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIGAGIRWRR 366 >gi|309791264|ref|ZP_07685795.1| hypothetical protein OSCT_1746 [Oscillochloris trichoides DG6] gi|308226690|gb|EFO80387.1| hypothetical protein OSCT_1746 [Oscillochloris trichoides DG6] Length = 361 Score = 266 bits (679), Expect = 5e-69, Method: Composition-based stats. Identities = 142/343 (41%), Positives = 215/343 (62%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD +++S L + +P LW + A+ +M++ L + ++ ++ +L Sbjct: 15 GGIFDLATKQEQISSLEERAAEPDLWNDPRTAQGVMQQLTRLKDEVAQWTNLESQLISLD 74 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L++L E D ++ E + ++ + E+ ++ LLSG D DA++ + AG GGT++ Sbjct: 75 ELIDLTEAEGDATLYTEIAAEVRAAQKELAQRELALLLSGPYDDRDAFVSIQAGMGGTDA 134 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA+M+LRMY RWAE R + +++ G+EAGIKSATL ++GP AYG ++ E GVHRL Sbjct: 135 QDWADMMLRMYLRWAETRGYSVTIVDMSAGDEAGIKSATLELRGPYAYGNIRAEAGVHRL 194 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 +R+SP+++ R TSF+ + V P VDD+ E+ I D RID +R+ G GGQ VNTTDSAV Sbjct: 195 IRLSPFNAAHTRQTSFARVEVVPEVDDAPEVTIKPEDLRIDVFRSGGHGGQGVNTTDSAV 254 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+TH+PTG+VV CQ ERSQ +N+ A +LR +L E ELQ++ E + +G Sbjct: 255 RLTHLPTGIVVTCQNERSQLQNRETAMRVLRGRLLERELQRQLEERARLRGEHRDAAFGS 314 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 Q+R+Y L P +VKD RT E ++ VLDG LD F++A L Sbjct: 315 QMRTYYLHPSTLVKDHRTEHETSNVYAVLDGQLDPFIEAYLRW 357 >gi|259419215|ref|ZP_05743132.1| peptide chain release factor 2 [Silicibacter sp. TrichCH4B] gi|259345437|gb|EEW57291.1| peptide chain release factor 2 [Silicibacter sp. TrichCH4B] Length = 374 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 190/352 (53%), Positives = 245/352 (69%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L+ L +W+ A RL N + EDP+LW + A+ LMR+RQ L +AI K I Sbjct: 12 IEKSLDLLAQRMNWETAEFRLEEFNARVEDPNLWDDPAAAQKLMRDRQSLVDAIDTYKGI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D++ L+EL E+D ++++ + L+ +K + K+ E+LL GE D NDA+LE+ Sbjct: 72 RQDLDDSVELIELGEMEEDDEVVKDAEETLKALKEKAAQKELEALLDGETDPNDAFLEIK 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+ML RMY RWAE R F + E G EAGIKSAT IKG NAYGWLK Sbjct: 132 AGAGGTEACDWASMLARMYVRWAESRGFSVDLQEEQAGAEAGIKSATYQIKGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+ +R TSF+++ YPV+DD+IEIE++ +D RIDTYR+SGAGGQH Sbjct: 192 SESGTHRLVRISPFGKGTR-ETSFAAVGAYPVIDDNIEIEVNPADIRIDTYRSSGAGGQH 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY+LEL +R N + Sbjct: 251 VNTTDSAVRITHEPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQLELDRRNAEVNALHEA 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K + GWG QIRSYV+QPYQMVKDLRTN E VLDGDLD FM ATLA+K Sbjct: 310 KGDAGWGNQIRSYVMQPYQMVKDLRTNHETADTKGVLDGDLDGFMAATLAMK 361 >gi|227529549|ref|ZP_03959598.1| peptide chain release factor RF2 [Lactobacillus vaginalis ATCC 49540] gi|227350508|gb|EEJ40799.1| peptide chain release factor RF2 [Lactobacillus vaginalis ATCC 49540] Length = 356 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 165/348 (47%), Positives = 222/348 (63%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L GGLFD D + ++ K +P W + + A+ ++ L + +++D + Sbjct: 2 LPASGGLFDLDALDESIAENEQKMAEPGFWDDNVAAQKVINANNELKDKRDTFVKLRDNI 61 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 + +EL E D + E + + E+E + LL GE D+ +A LE+H GAG Sbjct: 62 GNLQTSIELLELEPDDELQSEFEKSFGETQKELEQYRLNQLLDGEYDAKNAILEIHPGAG 121 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW MLLRMY RW E+ F E GEEAGIKS TLLIKG NA+G+L+ E+G Sbjct: 122 GTEAQDWGAMLLRMYVRWGEQHGFNVETASYEAGEEAGIKSVTLLIKGHNAFGYLRSEKG 181 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+D+ RRHTSF+S+ V P +D+S+ I+I SD R+DT+R+SGAGGQH+N T Sbjct: 182 VHRLVRISPFDAAGRRHTSFASVDVMPELDESVNIDIDPSDLRVDTFRSSGAGGQHINKT 241 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITHIPTG+V Q ERSQ +N+ A NML++KLYELE +K+ + E + EI Sbjct: 242 ESAVRITHIPTGIVTSSQAERSQLQNRVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLEI 301 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 GWG QIRSYV PY +VKD R+ E + V+DGDLD F+ A L K Sbjct: 302 GWGSQIRSYVFHPYTLVKDNRSGHETHNGQAVMDGDLDPFINAYLQWK 349 >gi|325292702|ref|YP_004278566.1| peptide chain release factor 2 [Agrobacterium sp. H13-3] gi|325060555|gb|ADY64246.1| peptide chain release factor 2 [Agrobacterium sp. H13-3] Length = 342 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 229/328 (69%), Positives = 279/328 (85%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 N K EDP LW + EA+ LMRERQ LD++I+ +K ++ +L DN+ L+EL E D I++ Sbjct: 2 NNKAEDPTLWNDATEAQKLMRERQQLDDSINGVKALEQQLKDNVELIELGEMEGDDEIVK 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 + D L+ ++ E +Q E++LSGEADSND YLEVH+GAGGTESQDWANMLLRMYTRWA+ Sbjct: 62 DAEDALKALRSEANRRQVEAMLSGEADSNDTYLEVHSGAGGTESQDWANMLLRMYTRWAD 121 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + FK E LE+HDGEEAGIKSAT+L+KG NA+GWLK E GVHRLVRISPYDSN+RRHTSF Sbjct: 122 REGFKVEVLEVHDGEEAGIKSATILVKGHNAFGWLKTESGVHRLVRISPYDSNARRHTSF 181 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 SS+WVYPVVDDSI+I+I+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+ V CQQE Sbjct: 182 SSVWVYPVVDDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIAVACQQE 241 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQHKN+A+AW+MLRA+LYE+ELQKRE+ AN +SKT+IGWG QIRSYVLQPYQ++KDL Sbjct: 242 RSQHKNRAKAWDMLRARLYEVELQKREDAANAQAASKTDIGWGHQIRSYVLQPYQLIKDL 301 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RT +E T+P +VLDGDL+ FM+A LA + Sbjct: 302 RTGVESTAPGNVLDGDLNQFMEAALAHR 329 >gi|332983173|ref|YP_004464614.1| peptide chain release factor 2 (bRF-2) [Mahella australiensis 50-1 BON] gi|332700851|gb|AEE97792.1| bacterial peptide chain release factor 2 (bRF-2) [Mahella australiensis 50-1 BON] Length = 353 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 168/341 (49%), Positives = 231/341 (67%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 LFD + + L + DP W ++ ++ + + + L + + ++ ++ + D L Sbjct: 6 LFDPAGMEEEIKNLEKQMADPSFWSDMERSQKVNQRIKALKDKLQNLRAVEQKWEDLRTL 65 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 +L EEDD SI+ E + L ++ EVE + E+LLSG D N+A + +HAGAGGTE+QD Sbjct: 66 ADLGREEDDASIVGEVAAELASLRKEVERLRIETLLSGPYDRNNAIVTLHAGAGGTEAQD 125 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 W ML RMYTRWAE + +K E L++ +G+EAGIKS T L++G NAYG+LK E+GVHRLVR Sbjct: 126 WVQMLYRMYTRWAEDKGYKVEVLDLLEGDEAGIKSVTFLVEGENAYGYLKAEKGVHRLVR 185 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+D+ RRHTSF+S+ V P +DD +EI+ D +IDTYR+SGAGGQHVN T+SA+RI Sbjct: 186 ISPFDAAGRRHTSFASVDVMPELDDDEGVEINPEDLKIDTYRSSGAGGQHVNKTESAIRI 245 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 THIPTG+VVQCQ ERSQH NK A ML+AKL EL+ Q+ + + + I WG QI Sbjct: 246 THIPTGIVVQCQNERSQHSNKETAMKMLKAKLLELKEQEEQAKISDIKGELKRIEWGSQI 305 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 RSY+ QPY MVKD RTN E + + V+DGD+D F+ L + Sbjct: 306 RSYIFQPYTMVKDHRTNAEIGNVNAVMDGDIDLFISEYLKM 346 >gi|302872499|ref|YP_003841135.1| hypothetical protein COB47_1880 [Caldicellulosiruptor obsidiansis OB47] gi|302575358|gb|ADL43149.1| hypothetical protein COB47_1880 [Caldicellulosiruptor obsidiansis OB47] Length = 372 Score = 265 bits (678), Expect = 5e-69, Method: Composition-based stats. Identities = 169/349 (48%), Positives = 235/349 (67%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 L + D D L +L ++T +P WQ++ ++ ++++ + L + I +++ Sbjct: 15 EEDLKEMRVSLDIDRLQSELKWLESETSNPDFWQDLENSQKVLQKIKRLKDKIERFQKLC 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D +L EL++EE + + +E L ++ ++E + E LL+G D N+A L +HA Sbjct: 75 SQWEDLKVLTELSIEEGNHEMAEELEKELLDLEKKIEDFKIEVLLNGPYDKNNAILSIHA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+QDWA MLLRMYTRWA K+ +K E L+I GEEAGIK+ T+ I G NAYG+LK Sbjct: 135 GAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTIRIVGENAYGYLKA 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+D+ RRHTSF+++ V P V+D +IEI E D IDT+RASGAGGQHV Sbjct: 195 EKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTFRASGAGGQHV 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRI HIPTG+VV CQ ERSQHKN+ A +L+AKL EL+ ++R E + + Sbjct: 255 NKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQ 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 T+IGWG QIRSYV PY +VKD RT E + V+DG++D F+ A L Sbjct: 315 TDIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363 >gi|148270343|ref|YP_001244803.1| peptide chain release factor 2 [Thermotoga petrophila RKU-1] gi|166225119|sp|A5IM04|RF2_THEP1 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|147735887|gb|ABQ47227.1| bacterial peptide chain release factor 2 (bRF-2) [Thermotoga petrophila RKU-1] Length = 367 Score = 265 bits (678), Expect = 6e-69, Method: Composition-based stats. Identities = 163/350 (46%), Positives = 233/350 (66%), Gaps = 2/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++ + + + + + + + K DP +W + +A+ ++ + L N +K Sbjct: 12 ELEKKYKDILSVVNENEVDREIEEIEKKLTDPSVWDDQKKAREYTQKLKRLKNISEDLKR 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ D + +EL ++D + Q + +Q ++ V+ + E +L+G+ D N+AYL V Sbjct: 72 VRSLFEDLEVAIEL--SDEDQEMAQHVEEIVQELEGAVKKLELEIILNGKYDPNNAYLSV 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA MLLRMY RWAE++ F E +E GEEAGIK AT+LIKG AYG+L Sbjct: 130 HPGAGGTESQDWAQMLLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATILIKGEYAYGYL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+ RRHTSF+S+ V P +DD ++IEI D +I+T+RASG GGQ Sbjct: 190 KHESGVHRLVRISPFDAARRRHTSFASVNVIPEIDDDVDIEIRPEDLKIETFRASGHGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN T+SAVRITH+PTG+VV CQ ERSQH+NK A +L+AKLY+LE++K++ + Sbjct: 250 YVNKTESAVRITHLPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKQREIQEIQG 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +I WG QIRSYV PY MVKD RT +E + V+DGD+D F++A L Sbjct: 310 ELKDISWGNQIRSYVFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAEL 359 >gi|167750196|ref|ZP_02422323.1| hypothetical protein EUBSIR_01170 [Eubacterium siraeum DSM 15702] gi|167656758|gb|EDS00888.1| hypothetical protein EUBSIR_01170 [Eubacterium siraeum DSM 15702] gi|291556130|emb|CBL33247.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium siraeum V10Sc8a] Length = 370 Score = 265 bits (678), Expect = 6e-69, Method: Composition-based stats. Identities = 166/347 (47%), Positives = 229/347 (65%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L L G D DN + L ++ P W +V ++ + ++ N + +++++ Sbjct: 18 LKELAGALDLDNLKAEIVKLEEQSAQPDFWNDVENSQKISQKIGEDKNIVQSYEKLRESY 77 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D + +LELA EEDD S+L E + + + E+E ++ +LLSGE D N+A L HAGAG Sbjct: 78 DDVMTMLELAQEEDDESMLPEIQELAKHFRTELESQKLATLLSGEFDHNNAILTFHAGAG 137 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW ML RMY WAE+ K L+ DGEEAGIKSA++L++G NAYG+LK E G Sbjct: 138 GTEAQDWVEMLYRMYNHWAEQHGMKVTVLDYLDGEEAGIKSASILVEGRNAYGYLKSENG 197 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR+SP+DS+ RRHTSF+S+ V P +++ I+IEISE + ++D YRASGAGGQ VN T Sbjct: 198 VHRLVRVSPFDSSGRRHTSFASVEVMPEINEDIDIEISEDEIKMDVYRASGAGGQKVNKT 257 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVRITHIPTG+V CQ ERSQH+N+ A ML++KL E++ ++ + + + + +I Sbjct: 258 SSAVRITHIPTGIVCACQTERSQHQNREYAMRMLKSKLLEIKEREHLDKISDIKGEQLQI 317 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYV PY MVKD RT E + V+DGDLD F+ A L Sbjct: 318 AWGAQIRSYVFMPYTMVKDHRTGYEMGNIGAVMDGDLDGFINAYLKA 364 >gi|152977397|ref|YP_001376914.1| peptide chain release factor 2 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152026149|gb|ABS23919.1| peptide chain release factor 2 [Bacillus cytotoxicus NVH 391-98] Length = 327 Score = 265 bits (678), Expect = 6e-69, Method: Composition-based stats. Identities = 163/325 (50%), Positives = 217/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 + W + A+ ++ E L + + +++ + + + EL EE D + +E Sbjct: 1 MMEAGFWDDQQGAQTVINEANALKDMVGKFRQLDETFENLEVTHELLKEEYDKDLHEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR Sbjct: 61 SEVKSLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D +EIE+ D ++DTYRASGAGGQHVNTTDSAVRITHIPT +V CQ ERSQ Sbjct: 181 EVVPEFNDEVEIEVRTEDLKVDTYRASGAGGQHVNTTDSAVRITHIPTNTIVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG++D F+ A L + Sbjct: 301 TEVGNVQAVMDGEIDPFIDAYLRSR 325 >gi|284989796|ref|YP_003408350.1| peptide chain release factor 2 [Geodermatophilus obscurus DSM 43160] gi|284063041|gb|ADB73979.1| peptide chain release factor 2 [Geodermatophilus obscurus DSM 43160] Length = 370 Score = 265 bits (678), Expect = 6e-69, Method: Composition-based stats. Identities = 150/354 (42%), Positives = 223/354 (62%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D D + ++ L + P LW +V A+ L + +L + ++E Sbjct: 11 ELDTTLRSIEAVLDVDRLRREVAELEQQASAPDLWNDVEAAQALTSKLSYLQGDLRRVEE 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D +L E+A+EE D + E L ++ ++ + +LLSGE DS +A + + Sbjct: 71 LRSRLDDVGLLHEMAVEESDEATAAEAERELASLRQAIDELEVRTLLSGEYDSREALVTI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 + AGG ++ D+A ML+RMY RWAE+ ++ E ++ EEAGIKSAT +K P AYG L Sbjct: 131 RSEAGGVDAADFAEMLMRMYLRWAERHRYPVELYDVSYAEEAGIKSATFAVKQPYAYGTL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + ++I E++ RID +R+SG GGQ Sbjct: 191 SVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHVDIPENEIRIDVFRSSGPGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PTG+VV CQ E+SQ +N+A A +L+A+L +++ + Sbjct: 251 SVNTTDSAVRITHLPTGIVVSCQNEKSQIQNRAAAMRVLQARLLARRQEEQRAEMDALRG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQMVKDLRT E + S VLDGD+D F++A + ++ Sbjct: 311 EGS--SWGNQMRSYVLHPYQMVKDLRTEQETGNTSAVLDGDIDPFIEAGIRWRR 362 >gi|293449213|ref|ZP_06663634.1| peptide chain release factor 2 [Escherichia coli B088] gi|332280425|ref|ZP_08392838.1| peptide chain release factor RF-2 [Shigella sp. D9] gi|291322303|gb|EFE61732.1| peptide chain release factor 2 [Escherichia coli B088] gi|332102777|gb|EGJ06123.1| peptide chain release factor RF-2 [Shigella sp. D9] Length = 332 Score = 265 bits (678), Expect = 6e-69, Method: Composition-based stats. Identities = 178/330 (53%), Positives = 226/330 (68%), Gaps = 1/330 (0%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 +N + E P +W A+ L +ER L+ + + +++ L D LLELA+E DD Sbjct: 2 EEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEADDEE 61 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 E L ++ ++ +F + SGE DS D YL++ AG+GGTE+QDWA+ML RMY R Sbjct: 62 TFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLR 121 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 WAE R FKTE +E +GE AGIKS T+ I G AYGWL+ E GVHRLVR SP+DS RRH Sbjct: 122 WAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRH 181 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPTG+V QC Sbjct: 182 TSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQC 241 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 Q +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG QIRSYVL + Sbjct: 242 QNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDD-SRI 300 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KDLRT +E + VLDG LD F++A+L Sbjct: 301 KDLRTGVETRNTQAVLDGSLDQFIEASLKA 330 >gi|170076819|ref|YP_001733457.1| peptide chain release factor 2 [Synechococcus sp. PCC 7002] gi|169884488|gb|ACA98201.1| peptide chain release factor 2 [Synechococcus sp. PCC 7002] Length = 359 Score = 265 bits (678), Expect = 6e-69, Method: Composition-based stats. Identities = 149/345 (43%), Positives = 221/345 (64%), Gaps = 1/345 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD ++ L + P W++ A+ +++E L ++ ++ Q + D Sbjct: 10 RTIFDLKTLDAKIFDLEQQAAQPEFWEDQQGAQDILQELTELKGTVAQYQQWQGQFEDAA 69 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + EL E +D ++L E +NL ++ E+ + + +LSGE D+ A L ++AGAGGT++ Sbjct: 70 AIAELLTEAEDPALLTEAMENLDDLQKELNRWELQQMLSGEYDNLGAVLTINAGAGGTDA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRW+EK+ +K EI +G+EAG+KSATL + G A+G+LK E+G HRL Sbjct: 130 QDWAEMLLRMYTRWSEKQGYKVRLAEISEGDEAGLKSATLEVTGRYAFGYLKHEKGTHRL 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 VRISP+++N +R TSF+ + V P+ D++++++I E D I T RA G GGQ+VN ++A Sbjct: 190 VRISPFNANGKRQTSFAGVEVMPILGDNAVKVDIPEKDLEITTSRAGGKGGQNVNKVETA 249 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRI H+PTGV V+C QERSQ +NK +A +L+AKL + ++R + E WG Sbjct: 250 VRIVHLPTGVAVRCTQERSQLQNKEKALAILKAKLLIIAQEQRAQEIAEIRGDMVEAAWG 309 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QIR+YV PYQMVKDLRTN E T V+DGDLD F++A+L Sbjct: 310 NQIRNYVFHPYQMVKDLRTNHETTDVDGVMDGDLDAFIEASLRQD 354 >gi|291279507|ref|YP_003496342.1| peptide chain release factor RF-2 [Deferribacter desulfuricans SSM1] gi|290754209|dbj|BAI80586.1| peptide chain release factor RF-2 [Deferribacter desulfuricans SSM1] Length = 375 Score = 265 bits (678), Expect = 6e-69, Method: Composition-based stats. Identities = 180/354 (50%), Positives = 249/354 (70%), Gaps = 3/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTK-TEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 ++ + + + D +++ ++ EDP W N E+K L++E+ L +S + Sbjct: 14 EIDKSIESFKQVVKEDEINKKIEAIDKMSMEDPDFW-NKKESKQLLKEQASLKKFLSEWE 72 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 E+ D +L+EL E + + ++ NL +K V + + +L+GE D N+A + Sbjct: 73 ELLTIREDIDVLIELFKEGSE-EVKEDIISNLNELKKRVSDFELKLILNGEHDINNAIVT 131 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +HAGAGGTE+ DW +ML RMYTRW E++K+K E L++ G+EAGIKS T + G +YG+ Sbjct: 132 IHAGAGGTEACDWVSMLFRMYTRWVERKKYKYEILDMLPGDEAGIKSITFNVIGEYSYGY 191 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LKGE GVHRLVRISP+DSN+RRHTSF+S++V P +DD I+IEI+ESD +I+T+RASGAGG Sbjct: 192 LKGESGVHRLVRISPFDSNNRRHTSFASVFVLPEIDDEIDIEINESDLKIETFRASGAGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVNTTDSAVRITH+PTG+VV CQ ERSQHKNKA A +L+A+LYE E++KR + E Sbjct: 252 QHVNTTDSAVRITHLPTGIVVSCQNERSQHKNKAHAMKILKARLYEYEMEKRNKEKEKLE 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 SSKTEIGWG QIRSYV+ PY+MVKDLRT E + V+DGD+DDF+K L ++ Sbjct: 312 SSKTEIGWGNQIRSYVMHPYKMVKDLRTRYETGNVDAVMDGDIDDFIKTYLLME 365 >gi|315149827|gb|EFT93843.1| peptide chain release factor 2 [Enterococcus faecalis TX0012] Length = 327 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 169/325 (52%), Positives = 217/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N A+ L+ E L ++ + L + ++ EL EE D I +E Sbjct: 1 MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + ++ + + LL+ D N+A +E+H GAGGTESQDW +MLLRMYTRWAE Sbjct: 61 ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEI I+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA +ML+AKLY+LE++K+ + A + EI WG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEISWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L + Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325 >gi|147679087|ref|YP_001213302.1| protein chain release factor B [Pelotomaculum thermopropionicum SI] gi|146275184|dbj|BAF60933.1| protein chain release factor B [Pelotomaculum thermopropionicum SI] Length = 336 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 158/327 (48%), Positives = 215/327 (65%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L + +P W +A+ ++ L + ++ + + L D +L EL EE+D + Sbjct: 2 LERQMLEPGFWDGQEKAQKAVQRLSSLRDRVAVFQRLDKDLEDLEVLAELGEEEEDEAAA 61 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E L + +V + LLSG D +A + +HAGAGGTE+QDW MLLRMYTRWA Sbjct: 62 AEVKQGLAVVAQKVAEMELTVLLSGPYDRGNAIVALHAGAGGTEAQDWVEMLLRMYTRWA 121 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+R FK E L++ G+EAG KSAT+ + GPNAYG+L+ E+GVHRLVRISP+D+ RRHTS Sbjct: 122 ERRGFKVEVLDLLPGDEAGTKSATIEVIGPNAYGYLRSEKGVHRLVRISPFDAAGRRHTS 181 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+ V P VDD ++++I+ D +IDT+R+ GAGGQHVN TDSAVRITH+PTG+VV CQ Sbjct: 182 FASVDVLPEVDDEVDVKINPDDLKIDTFRSGGAGGQHVNKTDSAVRITHLPTGIVVTCQN 241 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQ N+ A ML+A+L +LEL+K+E + EI WG QIRSYV PY +VKD Sbjct: 242 ERSQLANRLAAMKMLKARLIDLELRKKEAELAALRGEQQEIAWGSQIRSYVFHPYSLVKD 301 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352 RT E + V+DG++D F+ A L Sbjct: 302 HRTGHETGNVGAVMDGEIDSFIAAYLR 328 >gi|300312096|ref|YP_003776188.1| peptide chain release factor 2 [Herbaspirillum seropedicae SmR1] gi|300074881|gb|ADJ64280.1| peptide chain release factor 2 (RF-2) protein [Herbaspirillum seropedicae SmR1] Length = 337 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 174/335 (51%), Positives = 240/335 (71%), Gaps = 1/335 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 ++L +N + EDP++W + A+ L +E++ L+ + + +I L D L E+A E Sbjct: 2 KSEKLEQVNAELEDPNVWNDQKRAQDLGKEKKSLEAIVHTLIKIDSELTDARDLFEMARE 61 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D + + + +K VE +F + SG D+N+ ++++ AGAGGTE+QDWA+MLL Sbjct: 62 EKDEDTIIAIEGDAENLKKMVEEMEFRRMFSGPMDANNCFIDIQAGAGGTEAQDWASMLL 121 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 R Y R+ E++ FK E LE DGE AGIK+AT+ ++G AYG+L+ E GVHRLVR SP+DS Sbjct: 122 RQYLRYCERKGFKAEILEQSDGEVAGIKTATIKVEGEYAYGFLRTETGVHRLVRKSPFDS 181 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 ++ RHTSFSS++VYP VD+S EIEI+ +D R+DTYRASGAGGQH+N TDSAVR+TH P+G Sbjct: 182 SNGRHTSFSSLFVYPEVDESFEIEINPADVRVDTYRASGAGGQHINKTDSAVRLTHAPSG 241 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VVQCQ +RSQH+N+A+AW+MLRAKL+ELEL+KR E SKT++GWG QIRSYVL Sbjct: 242 IVVQCQNDRSQHRNRAEAWDMLRAKLFELELRKRMSEQQKLEDSKTDVGWGHQIRSYVLD 301 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +KDLRTN E + VLDGD+DDF+ A+L Sbjct: 302 -QSRIKDLRTNFETGNTKAVLDGDIDDFIAASLKQ 335 >gi|30023221|ref|NP_834852.1| peptide chain release factor 2 [Bacillus cereus ATCC 14579] gi|29898781|gb|AAP12053.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bacillus cereus ATCC 14579] Length = 325 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 165/321 (51%), Positives = 215/321 (66%) Query: 34 HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93 W + A+ ++ E L + + +++ + + I EL EE D + +E ++ Sbjct: 4 GFWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVK 63 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E Sbjct: 64 GLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVE 123 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 124 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 183 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +D +EIE+ D +IDTYRASGAGGQHVNTTDSAVRITH PT VV CQ ERSQ KN+ Sbjct: 184 EFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNR 243 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN E Sbjct: 244 EHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 303 Query: 334 SPSDVLDGDLDDFMKATLAIK 354 + V+DG++D F+ A L + Sbjct: 304 NVQAVMDGEIDPFIDAYLRSR 324 >gi|229020397|ref|ZP_04177152.1| Peptide chain release factor 2 [Bacillus cereus AH1273] gi|229026626|ref|ZP_04182968.1| Peptide chain release factor 2 [Bacillus cereus AH1272] gi|228734659|gb|EEL85311.1| Peptide chain release factor 2 [Bacillus cereus AH1272] gi|228740876|gb|EEL91119.1| Peptide chain release factor 2 [Bacillus cereus AH1273] Length = 326 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 163/325 (50%), Positives = 215/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 W + A+ ++ E L + + +++ + + + EL EE D + +E Sbjct: 1 MMSAGFWDDQQGAQTVINEANALKDMVGSFRQLDETFENLEMTHELLKEEYDEDLHEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR Sbjct: 61 SEVKTLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D +EIE+ D +IDTYRASGAGGQH+NTTDSAVRITH PT VV CQ ERSQ Sbjct: 181 EVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG++D F+ A L + Sbjct: 301 TEVGNVQAVMDGEIDPFIDAYLRSR 325 >gi|255926563|gb|ABG86573.2| peptide chain release factor 2 [Clostridium perfringens SM101] Length = 364 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 154/350 (44%), Positives = 227/350 (64%), Gaps = 1/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L +G + ++ + L K ++ W +V +A+ + +E + + + I K Sbjct: 14 ELKNNLKEMGASLCLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKN 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + +R+ D +L EL E D+ + + ++ + E++ + E++LSGE D N+A L + Sbjct: 74 LNERIDDVEVLKELMEENDEETAKE-IISEVKALSKEIDTLKIETILSGEYDRNNAILTL 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H G GG+++ DW MLLRMYTRW EK+ + E ++ G+EAG+KS TL +KG AYG+L Sbjct: 133 HTGVGGSDANDWTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+G+HRLVRISP+++N +R TSF+S+ V P + +IEI+ D RIDTYRA GAGGQ Sbjct: 193 KAEKGIHRLVRISPFNANGKRQTSFASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPTG+VVQCQ ERSQ N+ A ML++KL EL+ + +E Sbjct: 253 HVNKTESAVRITHIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++GWG QIRSYV PY MVKD RTN+E ++ + V+ GD+D+F+ A L Sbjct: 313 ELKDMGWGSQIRSYVFHPYSMVKDHRTNVETSNVNGVMGGDIDNFIIAYL 362 >gi|299821880|ref|ZP_07053768.1| peptide chain release factor RF2 [Listeria grayi DSM 20601] gi|299817545|gb|EFI84781.1| peptide chain release factor RF2 [Listeria grayi DSM 20601] Length = 338 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 167/336 (49%), Positives = 228/336 (67%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 R++ L + DP W + A+ ++ E L + +++++ + + LEL E Sbjct: 1 MEARIAELEDQMLDPSFWNDQQGAQTVINEANGLKDTYQAFHQLEEQQENLEVSLELLRE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D + ++ + LQ E++ + + +LS D N+A LE+H GAGGTESQDW +MLL Sbjct: 61 ELDADLKEQVEEELQTFVRELKDFELKMILSEPYDKNNAILEIHPGAGGTESQDWGSMLL 120 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY R+A+K+ FK E L+ G+EAGIKS TLLIKG NAYG+LK E+G+HRLVRISP+DS Sbjct: 121 RMYQRFADKKGFKVEMLDYQAGDEAGIKSVTLLIKGLNAYGYLKAEKGIHRLVRISPFDS 180 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 + RRHTSF S+ V P ++D IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+TH+PTG Sbjct: 181 SGRRHTSFVSVDVMPELNDDIEIEVRPEDLKIDTYRATGAGGQHINTTDSAVRMTHLPTG 240 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV CQ ERSQ KN+ QA ML+ KLY+ E +++E+ + EIGWG QIRSYV Sbjct: 241 IVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKEQELAAIRGEQKEIGWGSQIRSYVFH 300 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RT +E + V+DG++DDF+ A L K Sbjct: 301 PYSMVKDHRTEVETGNTQAVMDGEIDDFINAYLRSK 336 >gi|40063231|gb|AAR38058.1| peptide chain release factor 2 [uncultured marine bacterium 577] Length = 359 Score = 265 bits (677), Expect = 7e-69, Method: Composition-based stats. Identities = 171/346 (49%), Positives = 245/346 (70%), Gaps = 1/346 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD+D +R ++ EDP +W++ A+ L RE++ LD + ++ I+ +L Sbjct: 13 QSFGGIFDFDAKKERSDEISFLEEDPEIWKDSKRAQELGREKKILDKIVLTLETIKLQLQ 72 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D++ L ++A EE+D +L+ + +++ V +F ++ S D N+ +LE+ +G+GG Sbjct: 73 DSIDLFQMAKEENDIVVLESIRADAAKLETNVANMEFCNMFSNPMDPNNCFLEIQSGSGG 132 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDWA ML RMY R+ E+R +K E LE GE AGIKSA+L I G AYG+L+ E G+ Sbjct: 133 TEAQDWAAMLERMYLRYCERRDYKVEVLEESSGEVAGIKSASLKISGDYAYGYLRTESGI 192 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS SRRHTSF+S+++YP VDD+IEIEI+ +D R+DTYRASGAGGQH+N TD Sbjct: 193 HRLVRKSPFDSGSRRHTSFASVFIYPEVDDTIEIEINPADLRVDTYRASGAGGQHINKTD 252 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SA+RITH P+G+VV CQ +RSQH+N+A+A ML+++LYE+EL+K+ + E SKT+IG Sbjct: 253 SAIRITHNPSGIVVSCQNDRSQHRNRAEAMAMLKSRLYEVELRKQSDEKQAMEDSKTDIG 312 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYVL +KDLRT +E + VLDG LD+F+K +L Sbjct: 313 WGHQIRSYVLD-QSRIKDLRTGLEIGNTQGVLDGGLDEFIKTSLKQ 357 >gi|47567398|ref|ZP_00238111.1| peptide chain release factor 2 [Bacillus cereus G9241] gi|47568468|ref|ZP_00239168.1| peptide chain release factor 2 [Bacillus cereus G9241] gi|47569292|ref|ZP_00239977.1| peptide chain release factor 2 [Bacillus cereus G9241] gi|222098640|ref|YP_002532698.1| peptide chain release factor 2 [Bacillus cereus Q1] gi|228936472|ref|ZP_04099270.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228988409|ref|ZP_04148500.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229141914|ref|ZP_04270440.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST26] gi|229158750|ref|ZP_04286808.1| Peptide chain release factor 2 [Bacillus cereus ATCC 4342] gi|47554063|gb|EAL12429.1| peptide chain release factor 2 [Bacillus cereus G9241] gi|47554859|gb|EAL13210.1| peptide chain release factor 2 [Bacillus cereus G9241] gi|47556019|gb|EAL14357.1| peptide chain release factor 2 [Bacillus cereus G9241] gi|221242699|gb|ACM15409.1| peptide chain release factor [Bacillus cereus Q1] gi|228624734|gb|EEK81503.1| Peptide chain release factor 2 [Bacillus cereus ATCC 4342] gi|228641529|gb|EEK97834.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST26] gi|228771265|gb|EEM19740.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228823304|gb|EEM69138.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 326 Score = 265 bits (677), Expect = 8e-69, Method: Composition-based stats. Identities = 166/325 (51%), Positives = 215/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 W + A+ ++ E L + + +++ + + I EL EE D + +E Sbjct: 1 MMGAGFWDDQQGAQAVINEANALKDMVGSFRQLDETFENLEITHELLKEEYDEDLHEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR Sbjct: 61 SEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D +EIEI D +IDTYRASGAGGQHVNTTDSAVRITH PT VV CQ ERSQ Sbjct: 181 EVVPEFNDEVEIEIRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG++D F+ A L + Sbjct: 301 TEVGNVQAVMDGEIDPFIDAYLRSR 325 >gi|315194373|gb|EFU24765.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus CGS00] Length = 330 Score = 265 bits (677), Expect = 8e-69, Method: Composition-based stats. Identities = 159/325 (48%), Positives = 215/325 (66%), Gaps = 1/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P+ W N +A+ ++ + L ++ K +Q + D +L EE D + ++ Sbjct: 1 MAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDGEMKEDLE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + K +V+ + + LL G D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ Sbjct: 61 QEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180 Query: 210 WVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH P+G+VV Q ERS Sbjct: 181 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q KN+ A ML++KLY+L+L+++ + EIGWG QIRSYV PY MVKD RT Sbjct: 241 QIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353 N E V+DGD+ F+++ L Sbjct: 301 NEETGKVDAVMDGDIGPFIESYLRQ 325 >gi|302391071|ref|YP_003826891.1| bacterial peptide chain release factor 2 (bRF-2) [Acetohalobium arabaticum DSM 5501] gi|302203148|gb|ADL11826.1| bacterial peptide chain release factor 2 (bRF-2) [Acetohalobium arabaticum DSM 5501] Length = 366 Score = 265 bits (677), Expect = 8e-69, Method: Composition-based stats. Identities = 169/353 (47%), Positives = 237/353 (67%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L L D+D ++ L + P W + A+ + +E L + + + Sbjct: 12 LKGELAELRVSLDYDKLEEKHDQLRAEMSKPGFWDDSSRAQQISKEASALKDMMESFDRL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++RL + +L+EL EEDD S+ +E D LQ ++ ++E + + ++ GE D N A L ++ Sbjct: 72 EERLEEIEVLIELGQEEDDDSVTEEIKDKLQGLEEDIEELELKVVMDGEYDQNSALLSIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGG +SQDWA MLLRMY RWAEK+ ++ E LE GEEAGIKS TL I GP AYG+LK Sbjct: 132 PGAGGIDSQDWAEMLLRMYNRWAEKKDYQIETLEFMAGEEAGIKSVTLQINGPYAYGYLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHR+VR+SP+DS+ RRHTSF+S+ V P ++D I+I+I ++D +I+TYRASGAGGQH Sbjct: 192 AEKGVHRMVRVSPFDSSGRRHTSFASVEVLPEIEDDIDIDIEKNDLKIETYRASGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH PTG+VVQCQ RSQHKN+ +A +L+AKL++ +K+ E + Sbjct: 252 VNTTDSAVRITHQPTGIVVQCQSLRSQHKNRQKAMQILKAKLFDYMKEKQAEKLSEIRGE 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K +I WG QIRSY PYQ++KD RTN+E + V+DG+LD ++A L K Sbjct: 312 KKDISWGSQIRSYFFDPYQLIKDHRTNLEINNIEAVMDGELDPLIEAYLKETK 364 >gi|257424874|ref|ZP_05601301.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 55/2053] gi|257427542|ref|ZP_05603941.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 65-1322] gi|257430173|ref|ZP_05606557.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 68-397] gi|257432874|ref|ZP_05609234.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus E1410] gi|257435778|ref|ZP_05611826.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus M876] gi|282913594|ref|ZP_06321383.1| peptide chain release factor 2, programmed [Staphylococcus aureus subsp. aureus M899] gi|282918547|ref|ZP_06326284.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus C427] gi|282923513|ref|ZP_06331193.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus C101] gi|283957586|ref|ZP_06375039.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus A017934/97] gi|293500640|ref|ZP_06666491.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 58-424] gi|293509587|ref|ZP_06668298.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus M809] gi|293524173|ref|ZP_06670860.1| peptide chain release factor 2, programmed [Staphylococcus aureus subsp. aureus M1015] gi|297590314|ref|ZP_06948953.1| peptide chain release factor RF2 [Staphylococcus aureus subsp. aureus MN8] gi|257272444|gb|EEV04567.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 55/2053] gi|257275735|gb|EEV07208.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 65-1322] gi|257279370|gb|EEV09971.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 68-397] gi|257282289|gb|EEV12424.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus E1410] gi|257284969|gb|EEV15088.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus M876] gi|282314381|gb|EFB44771.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus C101] gi|282317681|gb|EFB48053.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus C427] gi|282322626|gb|EFB52948.1| peptide chain release factor 2, programmed [Staphylococcus aureus subsp. aureus M899] gi|283791037|gb|EFC29852.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus A017934/97] gi|290921136|gb|EFD98197.1| peptide chain release factor 2, programmed [Staphylococcus aureus subsp. aureus M1015] gi|291095645|gb|EFE25906.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 58-424] gi|291467684|gb|EFF10199.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus M809] gi|297576613|gb|EFH95328.1| peptide chain release factor RF2 [Staphylococcus aureus subsp. aureus MN8] gi|312438819|gb|ADQ77890.1| peptide chain release factor RF2 [Staphylococcus aureus subsp. aureus TCH60] Length = 331 Score = 265 bits (677), Expect = 8e-69, Method: Composition-based stats. Identities = 159/326 (48%), Positives = 215/326 (65%), Gaps = 1/326 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +P+ W N +A+ ++ + L ++ K +Q + D +L EE D + ++ Sbjct: 1 MMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDGEMKEDL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + K +V+ + + LL G D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ Sbjct: 61 EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKK 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180 Query: 209 IWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH P+G+VV Q ER Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNER 240 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KN+ A ML++KLY+L+L+++ + EIGWG QIRSYV PY MVKD R Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAI 353 TN E V+DGD+ F+++ L Sbjct: 301 TNEETGKVDAVMDGDIGPFIESYLRQ 326 >gi|49478907|ref|YP_039176.1| peptide chain release factor 2 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52140380|ref|YP_086452.1| peptide chain release factor 2 [Bacillus cereus E33L] gi|118480225|ref|YP_897376.1| peptide chain release factor 2 [Bacillus thuringiensis str. Al Hakam] gi|228923910|ref|ZP_04087187.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228930187|ref|ZP_04093196.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228948905|ref|ZP_04111178.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228955423|ref|ZP_04117428.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228961413|ref|ZP_04123027.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar pakistani str. T13001] gi|229050846|ref|ZP_04194398.1| Peptide chain release factor 2 [Bacillus cereus AH676] gi|229072632|ref|ZP_04205834.1| Peptide chain release factor 2 [Bacillus cereus F65185] gi|229082391|ref|ZP_04214854.1| Peptide chain release factor 2 [Bacillus cereus Rock4-2] gi|229094280|ref|ZP_04225356.1| Peptide chain release factor 2 [Bacillus cereus Rock3-42] gi|229112593|ref|ZP_04242130.1| Peptide chain release factor 2 [Bacillus cereus Rock1-15] gi|229124692|ref|ZP_04253873.1| Peptide chain release factor 2 [Bacillus cereus 95/8201] gi|229130431|ref|ZP_04259388.1| Peptide chain release factor 2 [Bacillus cereus BDRD-Cer4] gi|229147710|ref|ZP_04276053.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST24] gi|229153340|ref|ZP_04281518.1| Peptide chain release factor 2 [Bacillus cereus m1550] gi|229181440|ref|ZP_04308768.1| Peptide chain release factor 2 [Bacillus cereus 172560W] gi|229187396|ref|ZP_04314539.1| Peptide chain release factor 2 [Bacillus cereus BGSC 6E1] gi|229193426|ref|ZP_04320374.1| Peptide chain release factor 2 [Bacillus cereus ATCC 10876] gi|229199302|ref|ZP_04325969.1| Peptide chain release factor 2 [Bacillus cereus m1293] gi|296505600|ref|YP_003667300.1| peptide chain release factor 2 [Bacillus thuringiensis BMB171] gi|301056649|ref|YP_003794860.1| peptide chain release factor 2 [Bacillus anthracis CI] gi|49330463|gb|AAT61109.1| peptide chain release factor [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51973849|gb|AAU15399.1| peptide chain release factor 2 (RF-2) [Bacillus cereus E33L] gi|118419450|gb|ABK87869.1| bacterial peptide chain release factor 2 (bRF-2) [Bacillus thuringiensis str. Al Hakam] gi|228584162|gb|EEK42313.1| Peptide chain release factor 2 [Bacillus cereus m1293] gi|228590081|gb|EEK47952.1| Peptide chain release factor 2 [Bacillus cereus ATCC 10876] gi|228596100|gb|EEK53777.1| Peptide chain release factor 2 [Bacillus cereus BGSC 6E1] gi|228602015|gb|EEK59508.1| Peptide chain release factor 2 [Bacillus cereus 172560W] gi|228629944|gb|EEK86595.1| Peptide chain release factor 2 [Bacillus cereus m1550] gi|228635723|gb|EEK92210.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST24] gi|228653026|gb|EEL08907.1| Peptide chain release factor 2 [Bacillus cereus BDRD-Cer4] gi|228658787|gb|EEL14446.1| Peptide chain release factor 2 [Bacillus cereus 95/8201] gi|228670973|gb|EEL26280.1| Peptide chain release factor 2 [Bacillus cereus Rock1-15] gi|228689133|gb|EEL42956.1| Peptide chain release factor 2 [Bacillus cereus Rock3-42] gi|228700823|gb|EEL53346.1| Peptide chain release factor 2 [Bacillus cereus Rock4-2] gi|228710608|gb|EEL62581.1| Peptide chain release factor 2 [Bacillus cereus F65185] gi|228722502|gb|EEL73895.1| Peptide chain release factor 2 [Bacillus cereus AH676] gi|228798298|gb|EEM45297.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228804215|gb|EEM50829.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228810661|gb|EEM57009.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228829472|gb|EEM75100.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228835709|gb|EEM81073.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|296326652|gb|ADH09580.1| peptide chain release factor 2 [Bacillus thuringiensis BMB171] gi|300378818|gb|ADK07722.1| peptide chain release factor 2 [Bacillus cereus biovar anthracis str. CI] Length = 326 Score = 265 bits (677), Expect = 8e-69, Method: Composition-based stats. Identities = 165/325 (50%), Positives = 215/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 W + A+ ++ E L + + +++ + + I EL EE D + +E Sbjct: 1 MMGAGFWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHELLKEEYDEDLHEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR Sbjct: 61 SEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D +EIE+ D +IDTYRASGAGGQHVNTTDSAVRITH PT VV CQ ERSQ Sbjct: 181 EVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG++D F+ A L + Sbjct: 301 TEVGNVQAVMDGEIDPFIDAYLRSR 325 >gi|167628822|ref|YP_001679321.1| peptide chain release factor 2 [Heliobacterium modesticaldum Ice1] gi|167591562|gb|ABZ83310.1| peptide chain release factor 2 [Heliobacterium modesticaldum Ice1] Length = 333 Score = 265 bits (677), Expect = 8e-69, Method: Composition-based stats. Identities = 166/325 (51%), Positives = 219/325 (67%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 ++P W + A+ M+E L + + ++++ + D +L EL EE+D IL E Sbjct: 1 MIQEPGFWDDTERAQKTMQELTGLKDKVKAYRDLRSQWEDLCVLRELGAEENDAEILAEI 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 +Q I E++ E LL+G D N+A L +HAGAGGTE+ DW MLLRMY RW EKR Sbjct: 61 EAGIQTITAELDRWHLELLLNGPYDRNNALLTLHAGAGGTEAMDWNEMLLRMYIRWGEKR 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 +K E L+ G+EAGIKSATL + G NAYG+LKGE GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 GYKVELLDSLPGDEAGIKSATLSVVGENAYGYLKGEMGVHRLVRISPFDSSGRRHTSFAS 180 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P V D EI+I D ++DT+RA GAGGQHVN T+SAVRITHIPTG+VV CQ ERS Sbjct: 181 LEVLPEVSDGAEIQIRPEDLKVDTFRAGGAGGQHVNKTESAVRITHIPTGIVVACQSERS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q +N+A A ML+AKL+E + Q++E N + + +I +G QIRSYV PY +VKD RT Sbjct: 241 QIQNRATAMRMLQAKLFERQRQEQEAEVNRLKGDQQDIAFGSQIRSYVFHPYNLVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353 N E + V+DG+LD+F+ A L Sbjct: 301 NTEVGNVHAVMDGELDEFISAYLVW 325 >gi|12642654|gb|AAK00335.1|AF320250_8 RF2 [Lactobacillus delbrueckii] Length = 371 Score = 265 bits (677), Expect = 8e-69, Method: Composition-based stats. Identities = 166/348 (47%), Positives = 214/348 (61%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L GGLFD+DN + + K +P W N +A+ L+ E L ++ L Sbjct: 17 LTTSGGLFDFDNISESIEINEAKMAEPGFWDNQEKAQKLISETNLLKEKRDSFLALKKDL 76 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LEL E D + ++T D L +++ E + LLSGE D ++A +E+H GAG Sbjct: 77 TDEETALELLRLEADADLQKDTEDQLAKLQEEFHQYELNLLLSGEYDDHNALMEIHPGAG 136 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+ DW NMLLRMY R+ + R K E G+EAG+KS ++ I G NAYG LK E G Sbjct: 137 GTEAMDWGNMLLRMYQRYCDSRGLKFEVNNFEPGDEAGLKSVSVRISGKNAYGLLKSEHG 196 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+DS RRHTSF+S+ V P VDDSIEI+I D RID YR+SGAGGQH+N T Sbjct: 197 VHRLVRISPFDSAKRRHTSFASVEVIPEVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKT 256 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVRITHIPTG+V Q +RSQ +N+ A N +RAKL+ LE +K+ + + + +I Sbjct: 257 SSAVRITHIPTGIVTTSQAQRSQFQNRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQLDI 316 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYV PY MVKD RT E V+DG LD F+ A L + Sbjct: 317 AWGSQIRSYVFHPYSMVKDHRTGYETADVGGVMDGKLDPFIYAYLQWR 364 >gi|312135785|ref|YP_004003123.1| hypothetical protein Calow_1789 [Caldicellulosiruptor owensensis OL] gi|311775836|gb|ADQ05323.1| hypothetical protein Calow_1789 [Caldicellulosiruptor owensensis OL] Length = 372 Score = 265 bits (676), Expect = 8e-69, Method: Composition-based stats. Identities = 171/349 (48%), Positives = 235/349 (67%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 L + D D L +L ++T +P WQ++ ++ ++++ + L + I +++ Sbjct: 15 EEDLKEMRVSLDIDRLENELKWLESETSNPDFWQDLENSQKVLQKIKRLKDKIERFQKLY 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D +L EL+LEE + + +E L ++ ++E + E LL+G D N+A L +HA Sbjct: 75 SQWEDLKVLTELSLEEGNHDMAEELEKELLDLERKIEDFKIEVLLNGPYDKNNAILSIHA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+QDWA MLLRMYTRWA K+ +K E L+I GEEAGIK+ T+ I G NAYG+LK Sbjct: 135 GAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTVRIVGENAYGYLKA 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+D+ RRHTSF+++ V P V+D +IEI E D IDT+RASGAGGQHV Sbjct: 195 EKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTFRASGAGGQHV 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRI HIPTG+VV CQ ERSQHKN+ A +L+AKL EL+ ++R E + + Sbjct: 255 NKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQ 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 TEIGWG QIRSYV PY +VKD RT E + V+DG++D F+ A L Sbjct: 315 TEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363 >gi|221633612|ref|YP_002522838.1| peptide chain release factor 2, programmed frameshift [Thermomicrobium roseum DSM 5159] gi|254790922|sp|B9L0E3|RF2_THERP RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|221155396|gb|ACM04523.1| peptide chain release factor 2, programmed frameshift [Thermomicrobium roseum DSM 5159] Length = 374 Score = 265 bits (676), Expect = 8e-69, Method: Composition-based stats. Identities = 155/350 (44%), Positives = 223/350 (63%), Gaps = 2/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L +L+ +G + Q++ L + DP LWQ+ A+ L+R L + + + Sbjct: 11 ELVERLDRIGVRLCLPSKRQQIEQLEHEAADPDLWQDPQRAQSLLRRLSQLRDLVQEWET 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D L L L DD + + + V + LL+G+ D +DA L V Sbjct: 71 LSQQARDLLELRAL--ASDDLELAGQVEQEATELAERVRQLELRLLLTGQYDGHDAILAV 128 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAG GG ++QDWA MLLRMY RWA++ F E +++ +GEEAGIKSAT+ ++GP AYG+L Sbjct: 129 HAGTGGVDAQDWAEMLLRMYLRWAQRAGFAAEVVDLLEGEEAGIKSATVEVRGPYAYGYL 188 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE G HRLVR+SP+D+ RRHTSF+ + V P+V++ ++EI E D RIDT+RASG GGQ Sbjct: 189 KGEAGTHRLVRLSPFDAAHRRHTSFALVEVLPLVEEDDDVEIREEDIRIDTFRASGHGGQ 248 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITH+PTG+VV CQ ERSQ +N+ A +L+A+L EL++++R+E + Sbjct: 249 HVNKTESAVRITHLPTGIVVTCQNERSQIQNRETAMKILKARLLELKIRQRQEEQARLKG 308 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 GWG +IRSYVL PY MV D RT + + VL+G++D F++A L Sbjct: 309 KPVVTGWGNRIRSYVLHPYTMVTDHRTEVSTPNIQAVLEGEIDPFIEAYL 358 >gi|262049538|ref|ZP_06022408.1| peptide chain release factor 2 [Staphylococcus aureus D30] gi|259162374|gb|EEW46946.1| peptide chain release factor 2 [Staphylococcus aureus D30] Length = 330 Score = 265 bits (676), Expect = 9e-69, Method: Composition-based stats. Identities = 159/325 (48%), Positives = 214/325 (65%), Gaps = 1/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P+ W N +A+ ++ + L ++ K +Q + D +L EE D + + Sbjct: 1 MAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEYLE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + K +V+ + + LL G D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ Sbjct: 61 QEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180 Query: 210 WVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH P+G+VV Q ERS Sbjct: 181 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q KN+ A ML++KLY+L+L+++ + EIGWG QIRSYV PY MVKD RT Sbjct: 241 QIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353 N E V+DGD+ F+++ L Sbjct: 301 NEETGKVDAVMDGDIGPFIESYLRQ 325 >gi|317497043|ref|ZP_07955371.1| peptide chain release factor 2 [Lachnospiraceae bacterium 5_1_63FAA] gi|316895703|gb|EFV17857.1| peptide chain release factor 2 [Lachnospiraceae bacterium 5_1_63FAA] Length = 333 Score = 265 bits (676), Expect = 9e-69, Method: Composition-based stats. Identities = 172/325 (52%), Positives = 227/325 (69%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E+P W NV E++ +M+E + L + +++ + D L+++A E++D +++E + Sbjct: 1 MEEPGFWDNVEESQNVMKEVKSLKGVVEEYDDLKTKYEDIETLIDMAEEDEDADLIEEAT 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + E + +LL+GE D +DA L +HAGAGGTES DWA ML RM+TRWA K+ Sbjct: 61 ALMDEFEKTYEELRISTLLTGEYDKDDAILTLHAGAGGTESCDWAGMLYRMFTRWAGKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + TE L+ DG+EAGIKS T+ I G NAYG+L+ E+GVHRLVRISP+++ +R TSF+S Sbjct: 121 YGTEVLDYLDGDEAGIKSVTVKITGMNAYGYLRSEKGVHRLVRISPFNAAGKRQTSFASC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + D IE+EI++ D RIDTYRASGAGGQH+N TDSA+RITH+PTG+VVQCQ ERSQ Sbjct: 181 DVMPDIKDDIEVEIADEDIRIDTYRASGAGGQHINKTDSAIRITHLPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 HKNK QA ML+ KLY L+ Q+ E + + GWG QIRSYVLQPY MVKD RTN Sbjct: 241 HKNKDQAMKMLKTKLYLLKQQQHLEKLSDIRGDVGDNGWGNQIRSYVLQPYTMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E +PS VLDGDLD FM A LA Sbjct: 301 FESGNPSAVLDGDLDGFMNAYLAWD 325 >gi|229087663|ref|ZP_04219789.1| Peptide chain release factor 2 [Bacillus cereus Rock3-44] gi|228695624|gb|EEL48483.1| Peptide chain release factor 2 [Bacillus cereus Rock3-44] Length = 327 Score = 265 bits (676), Expect = 9e-69, Method: Composition-based stats. Identities = 164/325 (50%), Positives = 215/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 W + A+ ++ E L + + +++ + + + EL EE D + +E Sbjct: 1 MMGAGFWDDQQGAQTVINEANALKDMVGKFRQLDETFENLEVTHELLKEEYDEDLHEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR Sbjct: 61 SEVKSLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D +EIE+ D +IDTYRASGAGGQHVNTTDSAVRITH PT VV CQ ERSQ Sbjct: 181 EVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG++D F+ A L + Sbjct: 301 TEVGNVQAVMDGEIDPFIDAYLRSR 325 >gi|322389911|ref|ZP_08063451.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC 903] gi|321143347|gb|EFX38785.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC 903] Length = 336 Score = 265 bits (676), Expect = 9e-69, Method: Composition-based stats. Identities = 148/336 (44%), Positives = 206/336 (61%), Gaps = 2/336 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L K +P W + I A+ +E L ++ D ++ ILL+ E Sbjct: 1 MEEEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMVDLFDESEILLDFLAE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 +D + + LLS D+N+A LE+H G+GGTE+QDW +MLL Sbjct: 61 DDSVKEELIEKLEELD--KRMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLL 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTR+ FK E L+ G+EAGIKS TL +GP+AYG LK E GVHRLVRISP+DS Sbjct: 119 RMYTRFGNAHGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSF+S+ V P +D++IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG Sbjct: 179 AKRRHTSFTSVEVMPELDNTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV +R+Q+ N+ +A ML+AKLY+LE +K+ + + K EI WG QIRSYV Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFT 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E V+DGD+D F+ A L + Sbjct: 299 PYTMVKDHRTNYEVAQVDKVMDGDIDGFIDAYLKWR 334 >gi|65317159|ref|ZP_00390118.1| COG1186: Protein chain release factor B [Bacillus anthracis str. A2012] Length = 325 Score = 265 bits (676), Expect = 9e-69, Method: Composition-based stats. Identities = 165/321 (51%), Positives = 214/321 (66%) Query: 34 HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93 W + A+ ++ E L + + +++ + + I EL EE D + +E ++ Sbjct: 4 GFWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVK 63 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 + E+ + + LLS D N A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E Sbjct: 64 GLIQEMNEYELQLLLSDPYDKNKAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVE 123 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 124 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 183 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +D +EIE+ D +IDTYRASGAGGQHVNTTDSAVRITH PT VV CQ ERSQ KN+ Sbjct: 184 EFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNR 243 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN E Sbjct: 244 EHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 303 Query: 334 SPSDVLDGDLDDFMKATLAIK 354 + V+DG++D F+ A L + Sbjct: 304 NVQAVMDGEIDPFIDAYLRSR 324 >gi|73663271|ref|YP_302052.1| peptide chain release factor 2 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72495786|dbj|BAE19107.1| peptide chain release factor 2 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 334 Score = 265 bits (676), Expect = 9e-69, Method: Composition-based stats. Identities = 156/326 (47%), Positives = 219/326 (67%), Gaps = 1/326 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W N +A+ ++ + L + ++ + ++ L D L LEEDD ++ Q+ Sbjct: 1 MTDPTFWDNQEKAQDVIDKNNALKSVVNAYRTLESELEDMDTTRALLLEEDDETMKQDLE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++Q K E++ + + LL G D+N+A +E+H GAGGTESQDW NMLLRMY R+ E++ Sbjct: 61 QSVQDFKNELDQFELQLLLDGPYDANNAIMELHPGAGGTESQDWTNMLLRMYQRYCEQKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E + G+EAG+KS TL++KG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 FNVEIADYLPGDEAGVKSVTLIVKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180 Query: 210 WVYPVVDD-SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P ++ IEI+I+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ERS Sbjct: 181 DVIPQFNNTEIEIDINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q KN+ A L++KLY+L+++++E+ + EIGWG QIRSYV PY MVKD RT Sbjct: 241 QIKNREAAMKTLKSKLYQLKIEEQEQEMAEIRGEQKEIGWGSQIRSYVFHPYAMVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354 N E V+DGD+ F++A L + Sbjct: 301 NEETGKVDAVMDGDIGPFIEAFLRSQ 326 >gi|15639564|ref|NP_219014.1| peptide chain release factor 2 (prfB) [Treponema pallidum subsp. pallidum str. Nichols] gi|189025803|ref|YP_001933575.1| peptide chain release factor 2 [Treponema pallidum subsp. pallidum SS14] gi|6093958|sp|O83585|RF2_TREPA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|3322871|gb|AAC65552.1| peptide chain release factor 2 (prfB) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018378|gb|ACD70996.1| peptide chain release factor 2 [Treponema pallidum subsp. pallidum SS14] gi|291059953|gb|ADD72688.1| peptide chain release factor 2 [Treponema pallidum subsp. pallidum str. Chicago] Length = 368 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 162/348 (46%), Positives = 215/348 (61%), Gaps = 1/348 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 R GG+FD R++ L P W A+ L+ E + L + + ++ Sbjct: 9 RRACRKYGGVFDVAAYEARIATLEAAAAAPDFWSERARAEALLAELKTLRATLEPWRALR 68 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 D L ELA E D S+ E S I E LL E D DA++ +H+ Sbjct: 69 RESADLRALYELAREAQDASLEPELSSLFSDISARFEEASLTRLLHEEVDRLDAFVTIHS 128 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGG E+ DWA ML+RMYTRWAE+R F +++ + E G+KS TL I G +A+G+LKG Sbjct: 129 GAGGVEACDWAQMLMRMYTRWAERRSFCVHIVDLLESE-GGVKSVTLKICGSHAFGFLKG 187 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVRISP+DS +RRHTSF+S +V+PV+DD +E+ I D R+DTYR+ GAGGQHV Sbjct: 188 ETGVHRLVRISPFDSAARRHTSFTSTYVFPVLDDHVEVHIRSEDMRVDTYRSGGAGGQHV 247 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N TDSAVRITH+PTG+VV CQ ERSQ N+A A ++LRA+LY E QK+++ S K Sbjct: 248 NKTDSAVRITHLPTGIVVTCQNERSQISNRATALSLLRARLYAYERQKKQQEHQRFASEK 307 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +I WG QIRSYV PY MVKD R+ E + V+DG L+ F+++ L Sbjct: 308 KDISWGNQIRSYVFHPYTMVKDHRSKCETGNIHAVMDGALEPFIRSYL 355 >gi|15644327|ref|NP_229379.1| peptide chain release factor 2 [Thermotoga maritima MSB8] gi|7388057|sp|Q9X1R5|RF2_THEMA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|4982148|gb|AAD36646.1|AE001802_15 peptide chain release factor RF-2 [Thermotoga maritima MSB8] Length = 369 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 164/350 (46%), Positives = 232/350 (66%), Gaps = 2/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++ + + + D + L + K DP +W + +A+ ++ + L N +K Sbjct: 14 ELEKKYKDVLSVVNEDEINKELEEVEKKLTDPSVWDDQKKAREYTQKLKRLKNISEDLKR 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ D + +EL ++D + Q + +Q ++ V+ + E +L+G+ D N+AYL V Sbjct: 74 VRSLFEDLEVAIEL--SDEDQEMAQHVEEIVQELEGAVKKLELEIILNGKYDPNNAYLSV 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA MLLRMY RWAE++ F E +E GEEAGIK AT+LIKG AYG+L Sbjct: 132 HPGAGGTESQDWAQMLLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATILIKGEYAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+ RRHTSF+S+ V P +DD ++IEI D +I+T+RASG GGQ Sbjct: 192 KHESGVHRLVRISPFDAARRRHTSFASVNVIPEIDDDVDIEIRPEDLKIETFRASGHGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN T+SAVRITH+PTG+VV CQ ERSQH+NK A +L+AKLY+LE++K+ + Sbjct: 252 YVNKTESAVRITHLPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKRREIQEIQG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +I WG QIRSY+ PY MVKD RT +E + V+DGD+D F++A L Sbjct: 312 ELKDISWGNQIRSYIFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAEL 361 >gi|310815685|ref|YP_003963649.1| peptide chain release factor 2 [Ketogulonicigenium vulgare Y25] gi|308754420|gb|ADO42349.1| peptide chain release factor 2 [Ketogulonicigenium vulgare Y25] Length = 375 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 192/352 (54%), Positives = 244/352 (69%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + + + D + A RL N + EDP LW N A+ LMR+RQ L + IS + + Sbjct: 12 IEKSITLVAQRMDRETASYRLEEFNARVEDPTLWDNPEAAQKLMRDRQVLLDKISNVDAL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L DN+ L+E+ E D ++ E L+ ++ K+ E+LL GEAD ND +LE++ Sbjct: 72 ERDLRDNIELIEMGEAEGDDDVVAEAEAALRALRDVAGKKEIEALLDGEADGNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTES DWA++L RMY RWAEK+ + E GEEAGIKS + I G NAYGWLK Sbjct: 132 SGAGGTESCDWASILARMYVRWAEKKGYTVEMQSESPGEEAGIKSVSYKISGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIE+ + D RIDTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEVQDKDIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV ++SQH+N+ A L+++LY++EL +R N S Sbjct: 252 VNTTDSAVRITHLPTGIVVTSS-QKSQHQNRDIAMKALKSRLYQIELDRRNAAINEAHES 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K GWG QIRSYVLQPYQMVKDLRT+ E + VLDGDLD FM ATLA+ Sbjct: 311 KGSAGWGNQIRSYVLQPYQMVKDLRTSHETSDTQGVLDGDLDGFMAATLAMD 362 >gi|218961845|ref|YP_001741620.1| Protein chain release factor B [Candidatus Cloacamonas acidaminovorans] gi|167730502|emb|CAO81414.1| Protein chain release factor B [Candidatus Cloacamonas acidaminovorans] Length = 340 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 158/331 (47%), Positives = 222/331 (67%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 + L K P W++ +AK + ++ L + + +K++ + L L E+ + Sbjct: 2 IMELEQKMNAPDFWEDQTQAKKISKQLSQLRDELEHLKKLDTVKGELETYLTLLDEDFNA 61 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 +L E L RI+ +E + E L+ + D NDA L +H+GAGGTESQDWA MLLRMY Sbjct: 62 ELLAEAVSELPRIQSFIEKAEIECYLNDKYDHNDALLTIHSGAGGTESQDWAEMLLRMYA 121 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 WAEK + + ++ GEEAG+KS ++ IKG AYG LK E GVHRLVRISP+++ +R Sbjct: 122 HWAEKNDYSFDIIDSLPGEEAGLKSVSVEIKGDYAYGMLKSEIGVHRLVRISPFNAQGKR 181 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 TSF+S++VYP D+ +EIEI+ D +IDT+RASGAGGQ+VNTTDSAVRITH+PT + V Sbjct: 182 QTSFASVFVYPEFDEDLEIEINPKDLKIDTFRASGAGGQYVNTTDSAVRITHLPTNITVT 241 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 CQ ERSQ +N+ +A ++L+++LY+ ++RE+ E+SKTEIGWG QIRSYV PYQM Sbjct: 242 CQNERSQMQNREKAMSILKSRLYQYYEEQREKEKKNLENSKTEIGWGNQIRSYVFHPYQM 301 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +KD RTN E + V++GDL+DF+ A L Sbjct: 302 IKDHRTNYETGNVDKVMNGDLNDFIYAWLKY 332 >gi|228999928|ref|ZP_04159500.1| Peptide chain release factor 2 [Bacillus mycoides Rock3-17] gi|229007481|ref|ZP_04165078.1| Peptide chain release factor 2 [Bacillus mycoides Rock1-4] gi|228753869|gb|EEM03310.1| Peptide chain release factor 2 [Bacillus mycoides Rock1-4] gi|228759870|gb|EEM08844.1| Peptide chain release factor 2 [Bacillus mycoides Rock3-17] Length = 326 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 165/321 (51%), Positives = 214/321 (66%) Query: 34 HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93 W + A+ ++ E L + +++ + + + EL EE D + +E ++ Sbjct: 4 GFWDDQQGAQTVINEANALKEMVGKFRQLDETFENLEVTHELLKEEYDEDLHEELESEVK 63 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK + Sbjct: 64 SLVREMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVD 123 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 124 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 183 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +D IEIE+ D +IDTYRASGAGGQHVNTTDSAVRITH PT VV CQ ERSQ KN+ Sbjct: 184 EFNDDIEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNR 243 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A ML+AKLY+ +L++++ N + EIGWG QIRSYV PY +VKD RTN E Sbjct: 244 EHAMKMLKAKLYQKKLEEQQAQLNEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 303 Query: 334 SPSDVLDGDLDDFMKATLAIK 354 + V+DG++D F+ A L + Sbjct: 304 NVQAVMDGEIDPFIDAYLRSR 324 >gi|24216466|ref|NP_713947.1| peptidyl-tRNA hydrolase [Leptospira interrogans serovar Lai str. 56601] gi|59798086|sp|Q8EZT4|RF2_LEPIN RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|24197768|gb|AAN50965.1| peptidyl-tRNA hydrolase involved in peptide chain release [Leptospira interrogans serovar Lai str. 56601] Length = 367 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 166/351 (47%), Positives = 229/351 (65%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + RL L K EDP+LW N EA+++ +++ L+ ++ Sbjct: 15 ELQENFLNRWKLLNLEQDKDRLKSLTEKAEDPNLWNNPEEARLVSQKKNELEKKLNPWFT 74 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 IQ + D L++L L+E + + E S R++ + E + L D A+L + Sbjct: 75 IQQDILDFPDLVDLTLDEKGENGVGELSSEYNRLQEKFEELELLGALKNPEDLKPAFLNI 134 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA MLLRMYTR+ EK+ ++ +++ G+ AGIK+ATL + G A+G+L Sbjct: 135 HPGAGGTESQDWAEMLLRMYTRYFEKKGYQYSLIDVQAGDGAGIKNATLHVIGDFAFGFL 194 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE GVHRLVRISP+D+N RRHTSF S+ V P +DD I+I+I E D R+D YR+SGAGGQ Sbjct: 195 KGENGVHRLVRISPFDANKRRHTSFVSVHVSPEIDDDIDIKIEEKDIRVDVYRSSGAGGQ 254 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+P+G+VV CQ ERSQ KN+ A+ ML+A+LYELE +K +E Sbjct: 255 HVNTTDSAVRITHMPSGIVVACQNERSQIKNRDTAFKMLKARLYELEQEKAKEELEKKSG 314 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K +I WG QIRSYV PY +VKD RT+ E + + V+DGD++ F+ A L Sbjct: 315 EKKDIAWGSQIRSYVFHPYNLVKDHRTDHETGNVAAVMDGDIEPFILAYLK 365 >gi|313893701|ref|ZP_07827268.1| peptide chain release factor 2 [Veillonella sp. oral taxon 158 str. F0412] gi|313441715|gb|EFR60140.1| peptide chain release factor 2 [Veillonella sp. oral taxon 158 str. F0412] Length = 330 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 169/325 (52%), Positives = 230/325 (70%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W N +A+ + +E L NA+ K++ + D ++LE+A+EEDD S+ E Sbjct: 1 MSDPTFWDNPDKAREISQEATQLKNAVESYKQLVSDIEDANVMLEMAIEEDDSSMESEIK 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + ++ I+ VE ++ LLSGE D+N+A L HAGAGGTE+QDW +ML+RMY RWAEK Sbjct: 61 EYVKAIEETVEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKSG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E ++ G+EAG KS+T LIKG NA+G+LK E+GVHRLVRISP+D+ +RRHTSF+++ Sbjct: 121 FSIELMDEQPGDEAGTKSSTFLIKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD++EI I D ++DTYRASGAGGQH+N TDSAVR+TH PTG+VVQCQ +RSQ Sbjct: 181 DVMPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQTQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ QA +LRAKL+ELEL+K+ EI + I WG QIRSYV PY +VKD RTN Sbjct: 241 MQNREQALRLLRAKLFELELEKQAEIKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DG+LD F++ L + Sbjct: 301 VETGNVQAVMDGNLDQFIEGFLKKE 325 >gi|222530070|ref|YP_002573952.1| hypothetical protein Athe_2103 [Caldicellulosiruptor bescii DSM 6725] gi|222456917|gb|ACM61179.1| hypothetical protein Athe_2103 [Caldicellulosiruptor bescii DSM 6725] Length = 372 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 172/349 (49%), Positives = 236/349 (67%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 L +G LFD D L L T+T P WQ++ ++ ++++ + + + I +++ Sbjct: 15 EEDLKEMGFLFDIDGLESELKSLETETSKPEFWQDIENSQRILQKIKRIKDKIERFQKLY 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D +L EL++EE + + +E L ++ +++ + E LL+G D N+A L +HA Sbjct: 75 SQWEDLKVLTELSIEEGNHEMSEELEKELISLERKIDEFKIEILLNGPYDKNNAILSIHA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+QDWA MLLRMYTRWA K+ +K E L+I GEEAGIK+ T+ I G NAYG+LK Sbjct: 135 GAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTIRIVGENAYGYLKA 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+D+ RRHTSF+++ V P V+D +IEI E D IDTYR+SGAGGQHV Sbjct: 195 EKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTYRSSGAGGQHV 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRI HIPTG+VV CQ ERSQHKN+ A +L+AKL EL+ ++R E + + Sbjct: 255 NKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQ 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 TEIGWG QIRSYV PY +VKD RT E + V+DG++D F+ A L Sbjct: 315 TEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363 >gi|304439754|ref|ZP_07399652.1| peptide chain release factor RF2 [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371741|gb|EFM25349.1| peptide chain release factor RF2 [Peptoniphilus duerdenii ATCC BAA-1640] Length = 368 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 175/353 (49%), Positives = 235/353 (66%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ +N L D D +L LN K + W + A+ ++E H + I +K Sbjct: 14 EIESMVNSLIESMDIDGMKAKLRDLNDKQMEEGFWDDTESAQKTIKEFNHYNRKIENLKS 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D + LLE+ E D S ++ D+L +++ E + +LL+ + D ND L++ Sbjct: 74 LTDEISSLKDLLEIMEMEGDYSSYKDFKDDLIKLEKHAEDFKIATLLNDKYDDNDVILQI 133 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTE+QDWA+MLLRMYTR+ E++ F E L++ +EAGIKSATLLIKG + YG+L Sbjct: 134 HAGAGGTEAQDWASMLLRMYTRYCEQKGFSAEILDLQKEDEAGIKSATLLIKGDSCYGYL 193 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE+GVHRLVRISP+DSN RRHTSFSS+ VYP ++D +++I D +IDTYR+SGAGGQ Sbjct: 194 KGEKGVHRLVRISPFDSNKRRHTSFSSVDVYPELEDVEDVDIKPEDLKIDTYRSSGAGGQ 253 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTGVVVQCQ ERSQ +N+ A +L+AKL L ++++E Sbjct: 254 HVNTTDSAVRITHIPTGVVVQCQNERSQIQNRETAMKLLKAKLISLAQEEQKEAIEDLSG 313 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + ++I WG QIRSYV QPY MVKD RTN E V+DG+LD F+ A L K Sbjct: 314 NYSQIAWGSQIRSYVFQPYTMVKDHRTNEEIGDVESVMDGNLDPFINAYLQSK 366 >gi|282905164|ref|ZP_06313021.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus Btn1260] gi|282331571|gb|EFB61083.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus Btn1260] Length = 331 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 158/326 (48%), Positives = 215/326 (65%), Gaps = 1/326 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +P+ W N +A+ ++ + L ++ K +Q + D +L EE + + ++ Sbjct: 1 MMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFEGEMKEDL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + K +V+ + + LL G D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ Sbjct: 61 EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKK 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180 Query: 209 IWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH P+G+VV Q ER Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNER 240 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KN+ A ML++KLY+L+L+++ + EIGWG QIRSYV PY MVKD R Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAI 353 TN E V+DGD+ F+++ L Sbjct: 301 TNEETGKVDAVMDGDIGPFIESYLRQ 326 >gi|296876160|ref|ZP_06900214.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC 15912] gi|312867359|ref|ZP_07727568.1| peptide chain release factor 2 [Streptococcus parasanguinis F0405] gi|296432871|gb|EFH18664.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC 15912] gi|311097060|gb|EFQ55295.1| peptide chain release factor 2 [Streptococcus parasanguinis F0405] Length = 336 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 149/336 (44%), Positives = 206/336 (61%), Gaps = 2/336 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L K +P W + I A+ +E L ++ D ++ ILL+ E Sbjct: 1 MEEEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMVDLFDESEILLDFLAE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 +D + + LLS D+N+A LE+H G+GGTE+QDW +MLL Sbjct: 61 DDSVKEELIEKLEELD--KRMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLL 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTR+ FK E L+ G+EAGIKS TL +GP+AYG LK E GVHRLVRISP+DS Sbjct: 119 RMYTRFGNAHGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG Sbjct: 179 AKRRHTSFTSVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV +R+Q+ N+ +A ML+AKLY+LE +K+ + + K EI WG QIRSYV Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFT 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E V+DGD+D F+ A L + Sbjct: 299 PYTMVKDHRTNYEVAQVDKVMDGDIDGFIDAYLKWR 334 >gi|310778152|ref|YP_003966485.1| bacterial peptide chain release factor 2 (bRF-2) [Ilyobacter polytropus DSM 2926] gi|309747475|gb|ADO82137.1| bacterial peptide chain release factor 2 (bRF-2) [Ilyobacter polytropus DSM 2926] Length = 365 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 159/351 (45%), Positives = 227/351 (64%), Gaps = 1/351 (0%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 ++ + G D + ++ L +T W + E++ L++E L I + I+ Sbjct: 15 EKIEEIRGSLDLEGKENKVKELEKETLKDGFWNDKRESEKLIKEMNALKEIIGEYRSIEK 74 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 + +LLE +D + + + + + + LL GE D+N+A + +H+G Sbjct: 75 LSDEVSVLLEFVEMGEDEFLEE-LETKHRGLDKVIGAFDVKLLLDGEFDANNAIVTIHSG 133 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGGTE+ DWA+ML RMY+RW R +K L+ GE GIKS T+L++G AYG+LK E Sbjct: 134 AGGTEACDWADMLYRMYSRWCNNRGYKITELDFMPGEMVGIKSITILVEGMRAYGYLKNE 193 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 +G+HRLVRISP+D+N +RHTSF+S+ V P VD++ +IEI+ D +IDTYRASGAGGQHVN Sbjct: 194 KGIHRLVRISPFDANKKRHTSFASVDVMPEVDETTDIEINTGDLKIDTYRASGAGGQHVN 253 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVRITH+P+GVVV CQ+ERSQ +N+ A +LR+KL ELE++KREE + ++ Sbjct: 254 TTDSAVRITHLPSGVVVTCQRERSQLQNRETAMKLLRSKLLELEMKKREEELKKIQGEQS 313 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IGWG QIRSYV QPY +VKD RT +E + V+DGD+DDF+ L K Sbjct: 314 DIGWGSQIRSYVFQPYTLVKDHRTLVESGNIKAVMDGDIDDFINGHLRWLK 364 >gi|261409628|ref|YP_003245869.1| peptide chain release factor 2 [Paenibacillus sp. Y412MC10] gi|261286091|gb|ACX68062.1| peptide chain release factor 2 [Paenibacillus sp. Y412MC10] Length = 331 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 168/325 (51%), Positives = 223/325 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + +A+ L+ E + +++ +++Q D ++++ELA EE D S+ E Sbjct: 1 MAAPDFWDDNEKAQALIAEMNAVKSSVDQYQKLQADYDDAVVMIELADEEGDDSLAGEIG 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + ++ + VE + + LL+ D +A LE+H GAGGTESQDW ML RMYTRWAEKR Sbjct: 61 ETIKDLVGRVEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLHRMYTRWAEKRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGFNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + D +EI+I D +IDTYRASGAGGQH+NTTDSAVRITH+PTGVVV CQ ERSQ Sbjct: 181 DVVPEITDDVEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGVVVTCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A MLR+KLYE +++++++ +++I WG QIRSYV PY MVKD RT Sbjct: 241 IKNRERAMTMLRSKLYERKIEEQQKELAEIRGEQSDIAWGSQIRSYVFHPYSMVKDHRTQ 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DGDLD F+ L + Sbjct: 301 VETGNVGAVMDGDLDGFIDGYLRSQ 325 >gi|126729874|ref|ZP_01745687.1| peptide chain release factor 2 [Sagittula stellata E-37] gi|126709993|gb|EBA09046.1| peptide chain release factor 2 [Sagittula stellata E-37] Length = 374 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 186/353 (52%), Positives = 240/353 (67%), Gaps = 2/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ + L+ L W+ A RL N + EDP+LW N A+ LMR+RQ L +A+ Sbjct: 11 KIEKSLDLLKQRLGWETAQHRLEEFNARVEDPNLWDNPEAAQKLMRDRQSLVDALESYTS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D + L+EL E+D ++ + L+ + K+ E+LL GE D NDA+LE+ Sbjct: 71 LKQELEDQVELIELGEMEEDAEVVADAEAALKALVETSAKKELEALLDGETDGNDAFLEI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGGTE+ DWANML RMY RWAEKR F+ + E G EAGIKSAT IKG NAYGWL Sbjct: 131 KAGAGGTEACDWANMLARMYVRWAEKRGFEVDLQEEQAGAEAGIKSATYQIKGKNAYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G HRLVRISP+ +R TSF+++ YPV+DD+IE+ ++ +D RIDT+R+SGAGGQ Sbjct: 191 KSESGTHRLVRISPFGKGTR-ETSFAAVGAYPVIDDNIEVTVNPADIRIDTFRSSGAGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY+LEL +R N Sbjct: 250 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQLELDRRNAEVNALHE 308 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +K + GWG QIRSYVLQPYQMVKDLRT E VLDGDLD FM+ATLA++ Sbjct: 309 AKGDAGWGNQIRSYVLQPYQMVKDLRTQYETADTQGVLDGDLDPFMEATLALQ 361 >gi|49188023|ref|YP_031276.1| peptide chain release factor 2 [Bacillus anthracis str. Sterne] gi|49181950|gb|AAT57326.1| peptide chain release factor 2 [Bacillus anthracis str. Sterne] Length = 326 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 165/325 (50%), Positives = 214/325 (65%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 W + A+ ++ E L + + +++ + + I EL EE D + +E Sbjct: 1 MMGAGFWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHELLKEEYDEDLHEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + E+ + + LLS D N A LE+H GAGGTESQDW +MLLRMYTRWAEKR Sbjct: 61 SEVKGLIQEMNEYELQLLLSDPYDKNKAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D +EIE+ D +IDTYRASGAGGQHVNTTDSAVRITH PT VV CQ ERSQ Sbjct: 181 EVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG++D F+ A L + Sbjct: 301 TEVGNVQAVMDGEIDPFIDAYLRSR 325 >gi|99080709|ref|YP_612863.1| peptide chain release factor 2 [Ruegeria sp. TM1040] gi|122984362|sp|Q1GIB5|RF2_SILST RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|99036989|gb|ABF63601.1| bacterial peptide chain release factor 2 (bRF-2) [Ruegeria sp. TM1040] Length = 374 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 191/352 (54%), Positives = 245/352 (69%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L+ L +W+ A RL N + EDP+LW + A+ LMR+RQ L +A+ K I Sbjct: 12 IEKSLDLLAQRMNWETAEFRLEEFNARVEDPNLWDDPAAAQKLMRDRQSLVDAMDTYKSI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D++ L+EL E+D ++++ D L+ +K + K+ E+LL GE D NDA+LE+ Sbjct: 72 RQDLQDSVELIELGEMEEDAEVVKDAEDTLKALKEKAAQKELEALLDGETDPNDAFLEIK 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+ML RMY RWAE R F E E G EAGIKSAT IKG NAYGWLK Sbjct: 132 AGAGGTEACDWASMLARMYVRWAESRGFSVELQEEQAGAEAGIKSATYQIKGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+ +R TSF+++ YPV+DD+IEIE++ +D RIDTYR+SGAGGQH Sbjct: 192 SESGTHRLVRISPFGKGTR-ETSFAAVGAYPVIDDNIEIEVNPADIRIDTYRSSGAGGQH 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY+LEL +R N + Sbjct: 251 VNTTDSAVRITHEPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQLELDRRNAEVNALHEA 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K + GWG QIRSYV+QPYQMVKDLRTN E VLDGDLD FM ATLA+K Sbjct: 310 KGDAGWGNQIRSYVMQPYQMVKDLRTNHETADTKGVLDGDLDGFMAATLAMK 361 >gi|292487146|ref|YP_003530016.1| peptide chain release factor 1 [Erwinia amylovora CFBP1430] gi|291552563|emb|CBA19608.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora CFBP1430] gi|312171251|emb|CBX79510.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora ATCC BAA-2158] Length = 332 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 176/330 (53%), Positives = 229/330 (69%), Gaps = 1/330 (0%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 +N + E P +W A+ L +ER L+ + + ++ L D LLELA+E +D Sbjct: 2 QEVNAELEQPDVWNEPDRAQALGKERSALEAVVETLDQMTQGLEDVSGLLELAVEAEDED 61 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 E L + ++ +F + SGE DS D Y+++ AG+GGTE+QDWA+MLLRMY R Sbjct: 62 TFNEAVAELDGLDKKLGELEFRRMFSGEYDSADCYMDIQAGSGGTEAQDWASMLLRMYLR 121 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 WAE + FKTE +E DGE AG KSAT+ I G A+GWL+ E GVHRLVR SP+DS RRH Sbjct: 122 WAEAKGFKTEIIEESDGEVAGTKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRH 181 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TSFSS+++YP VDD+I+IEI+ +D RID YRASGAGGQHVN T+SAVRITH+PT +VVQC Sbjct: 182 TSFSSVFIYPEVDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQC 241 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 Q +RSQHKNK QA+ LRAKLYE E+QK+ E +K++IGWG QIRSYVL + Sbjct: 242 QNDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQTAEDNKSDIGWGSQIRSYVLDD-SRI 300 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KDLRT++E + VLDGDLD F++A+L Sbjct: 301 KDLRTSVETRNTQAVLDGDLDRFIEASLKA 330 >gi|312621634|ref|YP_004023247.1| hypothetical protein Calkro_0529 [Caldicellulosiruptor kronotskyensis 2002] gi|312202101|gb|ADQ45428.1| hypothetical protein Calkro_0529 [Caldicellulosiruptor kronotskyensis 2002] Length = 372 Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats. Identities = 168/349 (48%), Positives = 232/349 (66%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 L + D D L L +T P WQ++ ++ ++++ + + + I +++ Sbjct: 15 EEDLKEMRVSLDIDGLESELKSLENETSKPEFWQDIENSQKVLQKIKRIKDKIERFQKLY 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D +L EL++EE + + +E L ++ +++ + E LL+G D N+A L +HA Sbjct: 75 SQWEDLKVLTELSIEEGNHEMSEELEKELISLERKIDEFKIEILLNGPYDKNNAILSIHA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+QDWA MLLRMYTRWA K+ +K E L+I GEEAGIK+ T+ I G NAYG+LK Sbjct: 135 GAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTIRIVGENAYGYLKA 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+D+ RRHTSF+++ V P V+D +IEI E D IDTYR+SGAGGQHV Sbjct: 195 EKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTYRSSGAGGQHV 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRI HIPTG+VV CQ ERSQHKN+ A +L+AKL EL+ ++R E + + Sbjct: 255 NKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQ 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 TEIGWG QIRSYV PY +VKD RT E + V+DG++D F+ A L Sbjct: 315 TEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363 >gi|327190272|gb|EGE57372.1| peptide chain release factor 2 [Rhizobium etli CNPAF512] Length = 342 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 237/328 (72%), Positives = 284/328 (86%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 N K EDP+LW + EA+ LMRERQ LD+ I+ +K+++ +L DN+ L+EL EE D S+++ Sbjct: 2 NNKAEDPNLWNDAAEAQKLMRERQQLDDGINGVKQLEQQLNDNIELIELGEEEGDLSVVK 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E D L+ +K E +Q E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWAE Sbjct: 62 EAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWAE 121 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 +++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSF Sbjct: 122 RQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSF 181 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 SSIWVYPVVDDSI+IEI+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VVQCQQE Sbjct: 182 SSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQE 241 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQHKN+A+AW+MLRA++YE EL+KRE+ AN +SKT+IGWG QIRSYVLQPYQ+VKDL Sbjct: 242 RSQHKNRAKAWDMLRARMYEAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKDL 301 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RT + T+P DVLDGDL++FM+A LA + Sbjct: 302 RTGVASTAPDDVLDGDLNEFMEAALAHR 329 >gi|326383344|ref|ZP_08205032.1| peptide chain release factor 2 [Gordonia neofelifaecis NRRL B-59395] gi|326198094|gb|EGD55280.1| peptide chain release factor 2 [Gordonia neofelifaecis NRRL B-59395] Length = 370 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 157/357 (43%), Positives = 225/357 (63%), Gaps = 8/357 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D + +R+ L + DP LW + A+ + E H + + E+ Sbjct: 12 LDATLTTVEKVMDLEELRRRIDELEMQASDPDLWNDQDHAQKVTSELSHAQAELRRVTEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + RL D +L ELA E+ + + T D ++ ++E + +++L+GE D +A + Sbjct: 72 RSRLDDLPVLYELAEAEEGDAGVSATEDADTERADLRRDIEAMEVKTMLAGEYDPREALV 131 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGG ++ DWA ML+RMY RWAE+ E + EEAG+KSAT +K P YG Sbjct: 132 NIRSGAGGVDAADWAQMLMRMYIRWAEQHGHSVEVYDTSYAEEAGLKSATFAVKAPYMYG 191 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L EQG HRLVRISP+D+ RR TSF+ + V PVV+ + I+I E+D R+D YR+SG G Sbjct: 192 TLSVEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIDIDENDVRVDVYRSSGPG 251 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+TH+PTG+VV CQ E+SQ +NK A +L+AKL E +KR+E Sbjct: 252 GQSVNTTDSAVRLTHVPTGIVVTCQNEKSQLQNKVAAMRVLQAKLLE---RKRQEERAQM 308 Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 ++ K++ G WG Q+RSYVL PYQMVKDLRTN+E +PS VLDG+LD F++A + + Sbjct: 309 DALKSDTGASWGNQMRSYVLHPYQMVKDLRTNVESNNPSAVLDGELDQFIEAGIRWR 365 >gi|170289031|ref|YP_001739269.1| peptide chain release factor 2 [Thermotoga sp. RQ2] gi|281412649|ref|YP_003346728.1| peptide chain release factor 2 [Thermotoga naphthophila RKU-10] gi|238688848|sp|B1LB88|RF2_THESQ RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|170176534|gb|ACB09586.1| peptide chain release factor 2 [Thermotoga sp. RQ2] gi|281373752|gb|ADA67314.1| peptide chain release factor 2 [Thermotoga naphthophila RKU-10] Length = 367 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 164/350 (46%), Positives = 232/350 (66%), Gaps = 2/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++ + + + D + L + K DP +W + +A+ ++ + L N +K Sbjct: 12 ELEKKYKDVLSVVNEDEINKELEEVEKKLTDPSVWDDQKKAREYTQKLKRLKNISEDLKR 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ D + +EL ++D + Q + +Q ++ V+ + E +L+G+ D N+AYL V Sbjct: 72 VRSLFEDLEVAIEL--SDEDQEMAQHVEEIVQELEGAVKKLELEIILNGKYDPNNAYLSV 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA MLLRMY RWAE++ F E +E GEEAGIK AT+LIKG AYG+L Sbjct: 130 HPGAGGTESQDWAQMLLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATILIKGEYAYGYL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+ RRHTSF+S+ V P +DD ++IEI D +I+T+RASG GGQ Sbjct: 190 KHESGVHRLVRISPFDAARRRHTSFASVNVIPEIDDDVDIEIRPEDLKIETFRASGHGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN T+SAVRITH+PTG+VV CQ ERSQH+NK A +L+AKLY+LE++K+ + Sbjct: 250 YVNKTESAVRITHLPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKRREIQEIQG 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +I WG QIRSY+ PY MVKD RT +E + V+DGD+D F++A L Sbjct: 310 ELKDISWGNQIRSYIFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAEL 359 >gi|228942321|ref|ZP_04104860.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975250|ref|ZP_04135808.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981888|ref|ZP_04142183.1| Peptide chain release factor 2 [Bacillus thuringiensis Bt407] gi|228778000|gb|EEM26272.1| Peptide chain release factor 2 [Bacillus thuringiensis Bt407] gi|228784529|gb|EEM32550.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817365|gb|EEM63451.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 326 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 164/325 (50%), Positives = 216/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 W + A++++ E L + + +++ + + + EL EE D + +E Sbjct: 1 MMGAGFWDDQQGAQVVINEANALKDMVGSFRQLDETFENLEVTHELLKEEYDEDLHEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR Sbjct: 61 SEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D +EIE+ D +IDTYRASGAGGQHVNTTDSAVRITH PT VV CQ ERSQ Sbjct: 181 EVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG++D F+ A L + Sbjct: 301 TEVGNVQAVMDGEIDPFIDAYLRSR 325 >gi|134097701|ref|YP_001103362.1| putative peptide chain release factor 2 [Saccharopolyspora erythraea NRRL 2338] gi|291006339|ref|ZP_06564312.1| putative peptide chain release factor 2 [Saccharopolyspora erythraea NRRL 2338] gi|166225115|sp|A4F8R2|RF2_SACEN RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|133910324|emb|CAM00437.1| putative peptide chain release factor 2 [Saccharopolyspora erythraea NRRL 2338] Length = 367 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 152/354 (42%), Positives = 223/354 (62%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LS L + + D D +++ L + P LW +V A+ + + H + + IK+ Sbjct: 11 ELSTTLEGIESVMDLDALRAKIAELEEEAARPDLWDDVEHAQRVSSQLVHRQSELRKIKD 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ R+ D +L EL+ +E D S L E ++K ++E + +LLSG+ D +A + + Sbjct: 71 LRQRVEDLEVLYELSEDEGDDSGLAEADSERTKLKKDLEALEVRTLLSGDYDQREAVVTI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 A AGG ++ D+A ML+RMY RWAE+ ++ E + EEAG+KSAT + P AYG L Sbjct: 131 RAEAGGVDAADFAEMLMRMYVRWAERHEYPVEVYDTSYAEEAGLKSATFRVNAPYAYGTL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ +EI E D R+D +R+SG GGQ Sbjct: 191 SVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVEIPEKDIRVDVFRSSGPGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITHIPTG+VV CQ E+SQ +NKA A +L++KL + ++ + + Sbjct: 251 SVNTTDSAVRITHIPTGIVVSCQNEKSQLQNKAAALRVLQSKLLAKKKEQERAELDALKD 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 S + WG Q+RSYVL PYQMVKDLRT E +P VLDG +D F++A + ++ Sbjct: 311 SGS--SWGNQMRSYVLHPYQMVKDLRTEFEVGNPDAVLDGQIDGFLEAGIRWRR 362 >gi|116492233|ref|YP_803968.1| peptide chain release factor 2 [Pediococcus pentosaceus ATCC 25745] gi|116102383|gb|ABJ67526.1| bacterial peptide chain release factor 2 (bRF-2) [Pediococcus pentosaceus ATCC 25745] Length = 343 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 163/328 (49%), Positives = 218/328 (66%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 K +P+ W N +A++++ E L K + D + + + EL EDD + Sbjct: 9 EAKMAEPNFWDNQEQAQIVINENNELKQKYDNFKNLTDHVENLEVTAELLEMEDDPDVQS 68 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E L ++ + LL+G+ D+N+A +E+H GAGGTESQDW +MLLRMYTRWAE Sbjct: 69 EFESELAATAKLLQDYRLGLLLNGKYDANNAIIEIHPGAGGTESQDWGSMLLRMYTRWAE 128 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + +FK + + GE AGI S T+ I G NAYG+L+ E+GVHRLVR+SP+DS RRHTSF Sbjct: 129 QHQFKVQIEDYQAGEVAGISSVTMRIVGHNAYGYLRSEKGVHRLVRLSPFDSAGRRHTSF 188 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S+ V P +DDS+E+ I++ D R+D YR+SGAGGQH+N T SAVRITH+PTG+VV Q E Sbjct: 189 ASVDVMPELDDSVEVNINQDDLRVDVYRSSGAGGQHINKTSSAVRITHLPTGIVVASQAE 248 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQ +N+A A +ML+AKL+ELE QK+ E E + EIGWG QIRSYV PY MVKD Sbjct: 249 RSQLQNRATAMSMLKAKLFELEEQKKAEEKAKIEGIQLEIGWGSQIRSYVFHPYSMVKDH 308 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354 R+N E + V+DGD DDF+ A L K Sbjct: 309 RSNFETANVQGVMDGDFDDFINAYLQWK 336 >gi|160902329|ref|YP_001567910.1| peptide chain release factor 2 [Petrotoga mobilis SJ95] gi|189040002|sp|A9BHH8|RF2_PETMO RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|160359973|gb|ABX31587.1| peptide chain release factor 2 [Petrotoga mobilis SJ95] Length = 366 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 173/350 (49%), Positives = 235/350 (67%), Gaps = 2/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L +F+ D + + L+ + +P+ W + AK + + Q+L + I K+ Sbjct: 12 ELKENFEDLKDVFNIDKVEEEVKKLDKEMMEPNFWNDQNRAKKISKMAQNLKDEIDEFKK 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +++ + I +EL EDD S+ + L+ I+ ++ + LLS E D +A+L + Sbjct: 72 LENDFEELEIAVEL--SEDDPSMTAQVEAILKVIEKKIGSFRLRMLLSEEYDDANAFLSL 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA+MLLRMYTRWA+K + E ++ +G+EAGIKSAT+ I GP AYG L Sbjct: 130 HPGAGGTESQDWASMLLRMYTRWADKNNYDIETIDFQEGDEAGIKSATIKISGPYAYGKL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+N RRHTSF+SI V P D+++EIEI+ D +IDTYR+ GAGGQ Sbjct: 190 KYESGVHRLVRISPFDANGRRHTSFASISVMPEFDENVEIEINPDDLKIDTYRSGGAGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVRITH+PTG+VV Q ERSQH+NKA A +L+AKLYELE QK+ E Sbjct: 250 HVNKTDSAVRITHLPTGIVVAVQNERSQHQNKATALKILKAKLYELEHQKKLEEKLRLRG 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +I WG QIRSYVL PY +VKDLRT E ++ VLDG++D+F++ L Sbjct: 310 EVKDISWGNQIRSYVLYPYTLVKDLRTEYETSNAQAVLDGEIDEFIEEEL 359 >gi|15923744|ref|NP_371278.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus Mu50] gi|15926431|ref|NP_373964.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus N315] gi|82750458|ref|YP_416199.1| peptide chain release factor 2 [Staphylococcus aureus RF122] gi|156979082|ref|YP_001441341.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus Mu3] gi|253731382|ref|ZP_04865547.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|255005545|ref|ZP_05144146.2| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257794925|ref|ZP_05643904.1| peptide chain release factor 2 [Staphylococcus aureus A9781] gi|262052329|ref|ZP_06024532.1| peptide chain release factor 2 [Staphylococcus aureus 930918-3] gi|296275163|ref|ZP_06857670.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus MR1] gi|13700645|dbj|BAB41942.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus N315] gi|14246523|dbj|BAB56916.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus Mu50] gi|82655989|emb|CAI80394.1| peptide chain release factor 2 [Staphylococcus aureus RF122] gi|156721217|dbj|BAF77634.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus Mu3] gi|253724907|gb|EES93636.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|257788897|gb|EEV27237.1| peptide chain release factor 2 [Staphylococcus aureus A9781] gi|259159769|gb|EEW44810.1| peptide chain release factor 2 [Staphylococcus aureus 930918-3] gi|283470047|emb|CAQ49258.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus ST398] gi|285816456|gb|ADC36943.1| Peptide chain release factor 2 [Staphylococcus aureus 04-02981] gi|298694086|gb|ADI97308.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus ED133] gi|312829246|emb|CBX34088.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus ECT-R 2] gi|320141998|gb|EFW33826.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus MRSA177] gi|329313475|gb|AEB87888.1| Peptide chain release factor 2 [Staphylococcus aureus subsp. aureus T0131] Length = 330 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 159/325 (48%), Positives = 215/325 (66%), Gaps = 1/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P+ W N +A+ ++ + L ++ K +Q + D +L EE D + ++ Sbjct: 1 MAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDLE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + K +V+ + + LL G D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ Sbjct: 61 QEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180 Query: 210 WVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH P+G+VV Q ERS Sbjct: 181 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q KN+ A ML++KLY+L+L+++ + EIGWG QIRSYV PY MVKD RT Sbjct: 241 QIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353 N E V+DGD+ F+++ L Sbjct: 301 NEETGKVDAVMDGDIGPFIESYLRQ 325 >gi|313884513|ref|ZP_07818274.1| peptide chain release factor 2 [Eremococcus coleocola ACS-139-V-Col8] gi|312620297|gb|EFR31725.1| peptide chain release factor 2 [Eremococcus coleocola ACS-139-V-Col8] Length = 341 Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 170/336 (50%), Positives = 223/336 (66%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ + P W + +A+ ++ + + I+++ ++ D + LEL E Sbjct: 1 MEEDIADYEHQMLAPDFWDDNDKAQKVISQLNEAKASYQTIQDLVSQVDDLGMALELYEE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 D +L E D + + + + LLSG DS +A LE+H GAGGTESQDW +MLL Sbjct: 61 SQDLDMLSEAEDIMTVTSKALNNYELQLLLSGPHDSANAILEIHPGAGGTESQDWGSMLL 120 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RWA+K+ F+ E L+ G+EAGIKS TL IKG NAYG+LK E+GVHRLVRISP+DS Sbjct: 121 RMYQRWADKQGFQVEVLDYQAGDEAGIKSVTLEIKGHNAYGYLKSEKGVHRLVRISPFDS 180 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 N+RRHTSF+SI V P +DDSIEIEI+ D R+DTYRASGAGGQH+N T SAVRITHIPTG Sbjct: 181 NARRHTSFASIEVTPEMDDSIEIEINPDDIRVDTYRASGAGGQHINKTSSAVRITHIPTG 240 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +V Q Q +RSQ +N+ QA ML+AKLY+ E ++R + + + EIGWG QIRSYV Sbjct: 241 IVTQSQAQRSQFQNRDQAMAMLKAKLYQREEEERAKEMAAIKGQQLEIGWGSQIRSYVFH 300 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RT E + V+DGDLD FM A L + Sbjct: 301 PYSMVKDHRTGYEVGNSQAVIDGDLDGFMDAYLKWQ 336 >gi|84515548|ref|ZP_01002910.1| peptide chain release factor 2 [Loktanella vestfoldensis SKA53] gi|84510831|gb|EAQ07286.1| peptide chain release factor 2 [Loktanella vestfoldensis SKA53] Length = 374 Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 193/352 (54%), Positives = 248/352 (70%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + LN L D++ A RL + + EDP LW + A+ LMR+RQ L + ++ I Sbjct: 12 IQKSLNLLAQRMDYETARYRLEEFDARVEDPTLWDDPDAAQKLMRDRQVLVDTLTMHDTI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L DN+ L+E+ E D I+ E + L+ ++ + K+ E+LL GEAD+ND +LEV+ Sbjct: 72 KQELADNIELIEMGEMEGDADIITEAEEALKSLREKAAQKELEALLDGEADANDTFLEVN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWANML RMY RWAEK+ +K E + G+EAGIKS T I G NAYGWLK Sbjct: 132 AGAGGTESCDWANMLSRMYVRWAEKKGYKVELQSMQSGDEAGIKSVTYKIMGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD R+DTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRLDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL KR + N + Sbjct: 252 VNTTDSAVRITHFPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDKRSALVNEAHEN 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + GWG QIRSYVLQPYQMVKDLRT E + VLDGDLD M ATLA+ Sbjct: 311 AGDAGWGNQIRSYVLQPYQMVKDLRTGFETSDTKGVLDGDLDGLMGATLALD 362 >gi|148267214|ref|YP_001246157.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus JH9] gi|151220935|ref|YP_001331757.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus str. Newman] gi|221141228|ref|ZP_03565721.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253315812|ref|ZP_04839025.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253732798|ref|ZP_04866963.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus TCH130] gi|258418241|ref|ZP_05682506.1| peptide chain release factor 2 [Staphylococcus aureus A9763] gi|258430733|ref|ZP_05688445.1| peptide chain release factor 2 [Staphylococcus aureus A9299] gi|258440954|ref|ZP_05690789.1| peptide chain release factor 2 [Staphylococcus aureus A8115] gi|258445784|ref|ZP_05693961.1| peptide chain release factor 2 [Staphylococcus aureus A6300] gi|258449595|ref|ZP_05697697.1| peptide chain release factor 2 [Staphylococcus aureus A6224] gi|258452962|ref|ZP_05700956.1| peptide chain release factor 2 [Staphylococcus aureus A5948] gi|258453995|ref|ZP_05701967.1| peptide chain release factor 2 [Staphylococcus aureus A5937] gi|269202375|ref|YP_003281644.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus ED98] gi|282895050|ref|ZP_06303271.1| peptide chain release factor 2 [Staphylococcus aureus A8117] gi|282916096|ref|ZP_06323859.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus D139] gi|282922051|ref|ZP_06329748.1| peptide chain release factor 2 [Staphylococcus aureus A9765] gi|282926620|ref|ZP_06334250.1| peptide chain release factor 2 [Staphylococcus aureus A10102] gi|283769917|ref|ZP_06342809.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus H19] gi|297208519|ref|ZP_06924948.1| peptide chain release factor RF2 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300912611|ref|ZP_07130054.1| peptide chain release factor RF2 [Staphylococcus aureus subsp. aureus TCH70] gi|304381625|ref|ZP_07364275.1| peptide chain release factor RF2 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|147740283|gb|ABQ48581.1| bacterial peptide chain release factor 2 (bRF-2) [Staphylococcus aureus subsp. aureus JH9] gi|150373735|dbj|BAF66995.1| peptide chain release factor 2, programmed frameshift [Staphylococcus aureus subsp. aureus str. Newman] gi|253729163|gb|EES97892.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus TCH130] gi|257839034|gb|EEV63513.1| peptide chain release factor 2 [Staphylococcus aureus A9763] gi|257849405|gb|EEV73375.1| peptide chain release factor 2 [Staphylococcus aureus A9299] gi|257852468|gb|EEV76389.1| peptide chain release factor 2 [Staphylococcus aureus A8115] gi|257855360|gb|EEV78298.1| peptide chain release factor 2 [Staphylococcus aureus A6300] gi|257857103|gb|EEV80002.1| peptide chain release factor 2 [Staphylococcus aureus A6224] gi|257859473|gb|EEV82327.1| peptide chain release factor 2 [Staphylococcus aureus A5948] gi|257863860|gb|EEV86616.1| peptide chain release factor 2 [Staphylococcus aureus A5937] gi|262074665|gb|ACY10638.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus ED98] gi|282320044|gb|EFB50391.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus D139] gi|282591513|gb|EFB96585.1| peptide chain release factor 2 [Staphylococcus aureus A10102] gi|282593709|gb|EFB98701.1| peptide chain release factor 2 [Staphylococcus aureus A9765] gi|282762546|gb|EFC02685.1| peptide chain release factor 2 [Staphylococcus aureus A8117] gi|283460064|gb|EFC07154.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus H19] gi|296886774|gb|EFH25678.1| peptide chain release factor RF2 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300886857|gb|EFK82059.1| peptide chain release factor RF2 [Staphylococcus aureus subsp. aureus TCH70] gi|302332463|gb|ADL22656.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus JKD6159] gi|302750651|gb|ADL64828.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304339988|gb|EFM05932.1| peptide chain release factor RF2 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315129439|gb|EFT85432.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus CGS03] gi|315196430|gb|EFU26781.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus CGS01] gi|320139911|gb|EFW31772.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus MRSA131] gi|323438713|gb|EGA96454.1| peptide chain release factor 2 [Staphylococcus aureus O11] gi|329723780|gb|EGG60308.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 21189] gi|329724575|gb|EGG61082.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 21172] gi|329729572|gb|EGG65973.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 21193] Length = 331 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 159/326 (48%), Positives = 215/326 (65%), Gaps = 1/326 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +P+ W N +A+ ++ + L ++ K +Q + D +L EE D + ++ Sbjct: 1 MMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + K +V+ + + LL G D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ Sbjct: 61 EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKK 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180 Query: 209 IWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH P+G+VV Q ER Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNER 240 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KN+ A ML++KLY+L+L+++ + EIGWG QIRSYV PY MVKD R Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAI 353 TN E V+DGD+ F+++ L Sbjct: 301 TNEETGKVDAVMDGDIGPFIESYLRQ 326 >gi|229175857|ref|ZP_04303355.1| Peptide chain release factor 2 [Bacillus cereus MM3] gi|228607590|gb|EEK64914.1| Peptide chain release factor 2 [Bacillus cereus MM3] Length = 325 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 164/321 (51%), Positives = 214/321 (66%) Query: 34 HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93 W + A+ ++ E L + +++ + + I EL EE D + +E ++ Sbjct: 4 GFWDDQQGAQAVINEANALKEMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVK 63 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E Sbjct: 64 GLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVE 123 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S V P Sbjct: 124 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 183 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +D +EIEI D ++DTYRASGAGGQH+NTTDSAVRITH PT VV CQ ERSQ KN+ Sbjct: 184 EFNDEVEIEIRSEDLKVDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQIKNR 243 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN E Sbjct: 244 EHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 303 Query: 334 SPSDVLDGDLDDFMKATLAIK 354 + V+DG++D F+ A L + Sbjct: 304 NVQAVMDGEIDPFIDAYLRSR 324 >gi|229099612|ref|ZP_04230540.1| Peptide chain release factor 2 [Bacillus cereus Rock3-29] gi|229105789|ref|ZP_04236418.1| Peptide chain release factor 2 [Bacillus cereus Rock3-28] gi|229118678|ref|ZP_04248030.1| Peptide chain release factor 2 [Bacillus cereus Rock1-3] gi|228664870|gb|EEL20360.1| Peptide chain release factor 2 [Bacillus cereus Rock1-3] gi|228677678|gb|EEL31926.1| Peptide chain release factor 2 [Bacillus cereus Rock3-28] gi|228683908|gb|EEL37858.1| Peptide chain release factor 2 [Bacillus cereus Rock3-29] Length = 326 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 163/325 (50%), Positives = 215/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 W + A+ ++ E L + + +++ + + + EL EE D + +E Sbjct: 1 MMGAGFWDDQQGAQTVINEANALKDMVGKFRQLDETFENLEVTHELLKEEYDEDLHEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR Sbjct: 61 SEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D +EIE+ D +IDTYRASGAGGQH+NTTDSAVRITH PT VV CQ ERSQ Sbjct: 181 EVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG++D F+ A L + Sbjct: 301 TEVGNVQAVMDGEIDPFIDAYLRSR 325 >gi|314933063|ref|ZP_07840429.1| peptide chain release factor 2 [Staphylococcus caprae C87] gi|313654382|gb|EFS18138.1| peptide chain release factor 2 [Staphylococcus caprae C87] Length = 333 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 155/327 (47%), Positives = 216/327 (66%), Gaps = 1/327 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 DP W + +A+ ++ + L + ++ +++ + + D EL EE D + +E Sbjct: 1 MMADPDFWNDQSKAQEIIDKNNALKSIVNGYRDLANEVDDMSATRELLQEEYDEDMKEEL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++ + K +++ + + LL G D+N+A E+H GAGGTESQDWA+MLLRMY R+ E+ Sbjct: 61 ESDVIQFKDKMDQFELQLLLDGPHDANNAIFELHPGAGGTESQDWASMLLRMYQRYCEQN 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 F E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 GFNVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180 Query: 209 IWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH P+G+VV Q ER Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNER 240 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KN+ A ML++KLY+ +L ++E + EIGWG QIRSYV PY MVKD R Sbjct: 241 SQIKNREAAMKMLKSKLYQQKLDEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354 TN E V+DGD+ F++A L + Sbjct: 301 TNEETGKVDAVMDGDIGPFIEAYLRKE 327 >gi|228993892|ref|ZP_04153795.1| Peptide chain release factor 2 [Bacillus pseudomycoides DSM 12442] gi|228765843|gb|EEM14494.1| Peptide chain release factor 2 [Bacillus pseudomycoides DSM 12442] Length = 327 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 164/325 (50%), Positives = 214/325 (65%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 W + A+ ++ E L + +++ + + + EL EE D + +E Sbjct: 1 MMGAGFWDDQQGAQTVINEANALKEMVGKFRQLDETFENLEVTHELLKEEYDEDLHEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR Sbjct: 61 SEVKSLVREMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK + ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVDTVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D IEIE+ D +IDTYRASGAGGQH+NTTDSAVRITH PT VV CQ ERSQ Sbjct: 181 EVVPEFNDDIEIEVRTEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML+AKLY+ +L++++ N + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAQLNEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG++D F+ A L + Sbjct: 301 TEVGNVQAVMDGEIDPFIDAYLRSR 325 >gi|297200074|ref|ZP_06917471.1| peptide chain release factor 2 [Streptomyces sviceus ATCC 29083] gi|297147562|gb|EDY54581.2| peptide chain release factor 2 [Streptomyces sviceus ATCC 29083] Length = 368 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 158/353 (44%), Positives = 219/353 (62%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW N EA+ + + HL + + Sbjct: 13 LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQAEVRKADAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD L E L +K ++ + +LLSGE DS +A + + Sbjct: 73 RSRIDDLAVLFEMAEEEDDSDTLAEAESELTSVKKALDEMEVRTLLSGEYDSREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE++ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQKGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + + PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ + + + Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAAMDALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT+ E +P V +G++D F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTDFEVGNPEAVFNGEIDGFLEAGIRWRK 364 >gi|312884019|ref|ZP_07743736.1| peptide chain release factor RF-2 [Vibrio caribbenthicus ATCC BAA-2122] gi|309368477|gb|EFP96012.1| peptide chain release factor RF-2 [Vibrio caribbenthicus ATCC BAA-2122] Length = 332 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 173/329 (52%), Positives = 232/329 (70%), Gaps = 1/329 (0%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 +N + E P +W A+ L +ER L+ + I ++ + D LLELA+EE+D Sbjct: 2 EEVNAELEQPDVWNEPERAQALGKERSSLEAVVETIDQLNQGVEDVEGLLELAVEEEDQE 61 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 E L ++ ++E +F + SG+ DS+D Y+++ +G+GGTE+QDW +MLLRMY R Sbjct: 62 TFDEIEPELIELEFKLEKLEFRRMFSGDHDSSDCYIDLQSGSGGTEAQDWTSMLLRMYLR 121 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 WAE + FKTE +E+ +GE AG+K AT+ I G AYGWL+ E GVHRLVR SP+DS+ RRH Sbjct: 122 WAEAKGFKTEVIEVSEGEVAGLKGATIKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRH 181 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TSF+S ++YP +DD+I+I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT VVQC Sbjct: 182 TSFASAFIYPEIDDNIQIDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQC 241 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 Q +RSQHKNK QA LRAKL+ELE+QK+ E +K++IGWG QIRSYVL + Sbjct: 242 QNDRSQHKNKDQAMKQLRAKLFELEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRI 300 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 KDLRT IE + VLDGDLD F++A+L Sbjct: 301 KDLRTGIENRNTQAVLDGDLDKFIEASLK 329 >gi|323441389|gb|EGA99047.1| peptide chain release factor 2 [Staphylococcus aureus O46] Length = 331 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 158/326 (48%), Positives = 215/326 (65%), Gaps = 1/326 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +P+ W N +A+ ++ + L ++ K +Q + D +L EE D + ++ Sbjct: 1 MMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + K +V+ + + LL G D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ Sbjct: 61 EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKK 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 F+ E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 GFEVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180 Query: 209 IWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH P+G+VV Q ER Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNER 240 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KN+ A ML++KLY+L+L+++ + EIGWG QIRSYV PY MVKD R Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAI 353 TN E V+DGD+ F+++ L Sbjct: 301 TNEETGKVDAVMDGDIGPFIESYLRQ 326 >gi|311896293|dbj|BAJ28701.1| putative peptide chain release factor 2 [Kitasatospora setae KM-6054] Length = 351 Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats. Identities = 162/349 (46%), Positives = 218/349 (62%), Gaps = 2/349 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 ++ + + D D ++ L + P LW +V A+ + L + ++ ++ R+ Sbjct: 1 MSSIEAVLDLDKIRADIATLEEEAAAPTLWDDVANAQKVTSRLSFLQGELRKVETLRGRV 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D +L ELA EDD E L ++ VE + +LLSGE D+ +A + + A AG Sbjct: 61 EDLGVLFELAEAEDDADTRTEAEAELVSVQKAVEELEVRTLLSGEYDAREALVNIRAEAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G ++ D+A L+RMY RWAE+ + TE + EEAGIKSAT +K P AYG L EQG Sbjct: 121 GVDAADFAEQLMRMYLRWAERHGYPTEVYDTSYAEEAGIKSATFTVKSPYAYGTLSVEQG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HRLVRISP+D+ RR TSF+ + V PVV+ S ++I E D RID YRASG GGQ VNTT Sbjct: 181 THRLVRISPFDNQGRRQTSFAGVEVLPVVETSDHVDIDEGDLRIDVYRASGPGGQGVNTT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PTG+VV CQ ERSQ +NKA A N+L+AKL LE +++EE A + Sbjct: 241 DSAVRITHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEERAAMDALKDGGS 298 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P VLDGD+D F++A + +K Sbjct: 299 SWGNQMRSYVLHPYQMVKDLRTEHEVGNPQGVLDGDIDGFIEAGIRWRK 347 >gi|310644311|ref|YP_003949070.1| protein chain release factor b-like protein [Paenibacillus polymyxa SC2] gi|309249262|gb|ADO58829.1| Protein chain release factor B-like protein [Paenibacillus polymyxa SC2] Length = 339 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 164/332 (49%), Positives = 230/332 (69%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 ++ K P W + +A+ ++ E + +++ ++++ D +++ELA EE D Sbjct: 2 IANFEEKMAAPDFWDDNEKAQGVIAEMNVVKSSVDSYEQLRQEYEDAGMMVELAEEEGDE 61 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 +++ E ++++ + ++E + + LL+ D +A LE+H GAGGTESQDW MLLRMYT Sbjct: 62 ALVGEVENSIKSLLSKLEEFELQLLLNQPYDKLNAILELHPGAGGTESQDWGQMLLRMYT 121 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 RW EKR FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RR Sbjct: 122 RWGEKRGFKVETLDYLAGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDSSGRR 181 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSF S V P + D ++IEI D +IDTYRASGAGGQH+NTTDSAVRITH+PTG+VV Sbjct: 182 HTSFVSCDVVPEIADDVDIEIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGIVVT 241 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 CQ ERSQ KN+ +A MLR+KLYE +++++++ + +++I WG QIRSYV PY M Sbjct: 242 CQNERSQIKNRERAMTMLRSKLYERKIEEQQQQLDEIRGEQSDIAWGSQIRSYVFHPYSM 301 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 VKD RT++E + V+DGDLD F+ L + Sbjct: 302 VKDHRTSVETGNVGAVMDGDLDPFIDGYLRSQ 333 >gi|184154810|ref|YP_001843150.1| peptide chain release factor 2 [Lactobacillus fermentum IFO 3956] gi|183226154|dbj|BAG26670.1| peptide chain release factor 2 [Lactobacillus fermentum IFO 3956] Length = 355 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 168/347 (48%), Positives = 219/347 (63%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 ++ GGLFD D + ++ + P W + A+ + L +QD++ Sbjct: 1 MHASGGLFDLDALNESIAQGENEMTAPDFWDDNQRAQEKVAALNELKKRRDNFLTLQDQV 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 + + E+ E D + E DN ++ + + E LL G D +DA LE+H GAG Sbjct: 61 EELALTAEMLQAEPDPELKAELDDNFPGVQEHLRAYRLEQLLDGPYDQSDAILEIHPGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW MLLRMY RWA + F E GEEAGIKS TLLIKG NAYG+L E+G Sbjct: 121 GTEAQDWGEMLLRMYMRWANQHGFAVETANYEAGEEAGIKSVTLLIKGHNAYGYLHPEKG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+DS +RRHTSF+S+ V P++D+SIE+EI SD R+DT+RASGAGGQH+N T Sbjct: 181 VHRLVRISPFDSAARRHTSFASVDVMPILDESIEVEIDPSDLRVDTFRASGAGGQHINKT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITH+PTG+V Q ERSQ +N+ A NML++KLYELE +K+ + E + EI Sbjct: 241 ESAVRITHLPTGIVTSSQAERSQLQNRITAMNMLKSKLYELEEEKKAKERAQIEGEQKEI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 GWG QIRSYV PY +VKD RT E V+DGDLD F+ A L Sbjct: 301 GWGSQIRSYVFHPYTLVKDARTGYETHDVVGVMDGDLDPFINAYLQW 347 >gi|294791755|ref|ZP_06756903.1| peptide chain release factor 2 [Veillonella sp. 6_1_27] gi|294793616|ref|ZP_06758753.1| peptide chain release factor 2 [Veillonella sp. 3_1_44] gi|294455186|gb|EFG23558.1| peptide chain release factor 2 [Veillonella sp. 3_1_44] gi|294456985|gb|EFG25347.1| peptide chain release factor 2 [Veillonella sp. 6_1_27] Length = 330 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 166/325 (51%), Positives = 232/325 (71%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W N +A+ + +E L NA+ K++ + D ++LE+A++EDD S+ E Sbjct: 1 MSDPTFWDNPDKAREISQEATQLKNAVESYKQLVSDIEDANMMLEMAIDEDDLSMESEIK 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +++I+ +E ++ LLSGE D+N+A L HAGAGGTE+QDW +ML+RMY RWAEK Sbjct: 61 EYVKQIEETLEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKSG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E ++ G+EAGIKSAT L+KG NA+G+LK E+GVHRLVRISP+D+ +RRHTSF+++ Sbjct: 121 FSIELMDEQPGDEAGIKSATFLVKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD++EI I D ++DTYRASGAGGQH+N TDSAVR+TH PTG+VVQCQ +RSQ Sbjct: 181 DVMPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQTQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ QA +LRAKL+ELEL+K+ E+ + I WG QIRSYV PY +VKD RT+ Sbjct: 241 MQNREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHRTS 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DG+LD F++ L + Sbjct: 301 VETGNVQAVMDGNLDPFIEGFLKKE 325 >gi|195952400|ref|YP_002120690.1| peptide chain release factor 2 [Hydrogenobaculum sp. Y04AAS1] gi|195932012|gb|ACG56712.1| peptide chain release factor 2 [Hydrogenobaculum sp. Y04AAS1] Length = 375 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 171/352 (48%), Positives = 242/352 (68%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + ++ L D + + + + +P W + +AK + ++R+ L + ++ + Sbjct: 11 IKKRFEELSSSIDEEKIKKEIEKYDQMMSEPDFWSDQEKAKSISQKRKALQDKLNTYTSL 70 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D ++ EED + L + L+ ++ +++ + E+ LS E D N+AYL + Sbjct: 71 KSRIKDLDEMVSELKEEDLDTTLLISE-ELEAVEKDLKKFELETYLSDEMDINNAYLTIQ 129 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLRMYTRWAEK ++ + +I+ + AGIKSATL IKGP AYG+LK Sbjct: 130 AGAGGTEACDWASMLLRMYTRWAEKHGYEVQLTDINPDDVAGIKSATLYIKGPYAYGYLK 189 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N+RRHTSF+S+ V P V++ + IEI E D RIDTYRASGAGGQ+ Sbjct: 190 SENGVHRLVRISPFDANARRHTSFASVLVVPEVNEDVNIEIKEEDLRIDTYRASGAGGQY 249 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TD+AVRITHIPTG+VV CQQERSQ +N+ +A ML+A+LY+LELQK EE E Sbjct: 250 VNKTDTAVRITHIPTGIVVACQQERSQIQNRRKAMEMLKARLYQLELQKIEEKKKSLEGP 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT+IGWG +IRSY+ QP Q+VKDLRT E + V+DG++D+F++A L K Sbjct: 310 KTDIGWGYKIRSYIFQPSQLVKDLRTGEESGNIEAVMDGEIDNFIEAYLRKK 361 >gi|70727136|ref|YP_254052.1| peptide chain release factor 2 [Staphylococcus haemolyticus JCSC1435] gi|68447862|dbj|BAE05446.1| peptide chain release factor 2 [Staphylococcus haemolyticus JCSC1435] Length = 332 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 159/325 (48%), Positives = 218/325 (67%), Gaps = 1/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + +A+ ++ + L + ++ E+++ + D EL EE D + + Sbjct: 1 MTEPDFWDDQNKAQDVIDKNNALKSVVNGYHELEEEVEDMTATWELLQEELDGDVKSDLE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 N+ K +V+ + + LL G D+N+A LE+H GAGGTESQDWA+MLLRMY R+ E++ Sbjct: 61 QNVLDFKEKVDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYGEQQG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 FKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180 Query: 210 WVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ERS Sbjct: 181 DVIPEFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q KN+ A ML+AKLY+L+L+++E + EIGWG QIRSYV PY MVKD RT Sbjct: 241 QIKNREAAMKMLKAKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353 N E V+DG++ F+++ L Sbjct: 301 NEETGKVDAVMDGEIGPFIESYLRY 325 >gi|45656368|ref|YP_000454.1| peptide chain release factor 2 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|59798054|sp|Q72V33|RF2_LEPIC RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|45599602|gb|AAS69091.1| peptide chain release factor 2 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 367 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 166/351 (47%), Positives = 229/351 (65%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + RL L K EDP+LW N EA+++ +++ L+ ++ Sbjct: 15 ELQENFLNRWKLLNLEQDKDRLKSLTEKAEDPNLWNNPEEARLVSQKKNELEKKLNPWFT 74 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 IQ + D L++L L+E + + E S R++ + E + L D A+L + Sbjct: 75 IQQDILDFPDLVDLTLDEKGENGVGELSSEYNRLQEKFEELELLGALKNPEDLKPAFLNI 134 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA MLLRMYTR+ EK+ ++ +++ G+ AGIK+ATL + G A+G+L Sbjct: 135 HPGAGGTESQDWAEMLLRMYTRYFEKKGYQYSLIDVQAGDGAGIKNATLHVIGDFAFGFL 194 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE GVHRLVRISP+D+N RRHTSF S+ V P +DD I+I+I E D R+D YR+SGAGGQ Sbjct: 195 KGENGVHRLVRISPFDANKRRHTSFVSVHVSPEIDDDIDIKIEEKDIRVDVYRSSGAGGQ 254 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+P+G+VV CQ ERSQ KN+ A+ ML+A+LYELE +K +E Sbjct: 255 HVNTTDSAVRITHMPSGIVVACQNERSQIKNRDTAFKMLKARLYELEQEKAKEELEKKSG 314 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K +I WG QIRSYV PY +VKD RT+ E + + V+DGD++ F+ A L Sbjct: 315 EKKDITWGSQIRSYVFHPYNLVKDHRTDHETGNVAAVMDGDIEPFILAYLK 365 >gi|323140697|ref|ZP_08075618.1| peptide chain release factor 2 [Phascolarctobacterium sp. YIT 12067] gi|322414821|gb|EFY05619.1| peptide chain release factor 2 [Phascolarctobacterium sp. YIT 12067] Length = 329 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 158/326 (48%), Positives = 222/326 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ ++ L + ++ + D L E+A EE+D S+L E Sbjct: 1 MGDPTFWDDPEKAQKTAQDVNSLKEEVDGFHKLSAGVDDLEALQEMAAEENDESLLPEMD 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + + E+E+ + LLSGE D+N+A L +HAGAGGTE+QDW +MLLRM+TR+AE+ Sbjct: 61 ELLAKCRSELEHLELGMLLSGEYDANNAILTLHAGAGGTEAQDWTSMLLRMFTRFAEQNG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L+ G+EAG+KSAT+ + G NAYG+L+ E+GVHRLVRISP+D+N+RRHTSF+++ Sbjct: 121 FALEMLDYQPGDEAGVKSATIQVNGHNAYGFLRSEKGVHRLVRISPFDANARRHTSFAAV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD++++ I+ + R+D YR+SGAGGQHVN T SAVR+TH PTG+VVQCQ ERSQ Sbjct: 181 DVMPELDDTVDVNINMDEVRVDVYRSSGAGGQHVNKTSSAVRMTHEPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ + MLRAKLYE E K++ + + I WG QIRSYV QPY MVKD RT Sbjct: 241 IQNRERCLQMLRAKLYEYEKAKQDALVSDIAGDYQNIEWGSQIRSYVFQPYTMVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355 E + V+DGDL F++A L ++ Sbjct: 301 CETGNIQAVMDGDLMPFVEAYLRSQQ 326 >gi|222148341|ref|YP_002549298.1| peptide chain release factor 2 [Agrobacterium vitis S4] gi|221735329|gb|ACM36292.1| peptide chain release factor 2 [Agrobacterium vitis S4] Length = 344 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 230/329 (69%), Positives = 280/329 (85%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 LN K EDP+LW + EA+ LMRERQ L+++I+ ++ ++ ++ DN+ L+E+ EE D SI+ Sbjct: 4 LNNKAEDPNLWNDAAEAQKLMRERQQLEDSIAGVRRLEQQMKDNIELIEMGEEEGDESIV 63 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 +E D L+ +K E Q E++LSGEAD ND Y+EVH+GAGGTESQDWANMLLRMYTRWA Sbjct: 64 KEAEDGLKALKAESGKLQVEAMLSGEADGNDTYVEVHSGAGGTESQDWANMLLRMYTRWA 123 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+ FK E LE+HDGEEAGIKSAT+L+KG NAYGW+K E GVHRLVRISPYDSN+RRHTS Sbjct: 124 ERSGFKVELLEVHDGEEAGIKSATILVKGHNAYGWMKTESGVHRLVRISPYDSNARRHTS 183 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FSSIWVYPVVDDSI+I+I+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIP+G+ V CQQ Sbjct: 184 FSSIWVYPVVDDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPSGIAVSCQQ 243 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQHKNKA+AW+MLRA+LYE+EL+KREE AN +SKT+IGWG QIRSYVLQPYQ+VKD Sbjct: 244 ERSQHKNKAKAWDMLRARLYEVELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKD 303 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 LRT +E T+P DVL+GD+ FM+A LA + Sbjct: 304 LRTGVESTAPDDVLNGDISPFMEAALAHR 332 >gi|256375089|ref|YP_003098749.1| peptide chain release factor 2 [Actinosynnema mirum DSM 43827] gi|255919392|gb|ACU34903.1| peptide chain release factor 2 [Actinosynnema mirum DSM 43827] Length = 367 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 161/353 (45%), Positives = 222/353 (62%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS L + + D D +++ L + P LW + +A+ + + H + + + Sbjct: 12 LSATLASIEAVMDLDALRAQVAELEEQAARPDLWDDQEKAQRVTSQLSHKQGELRRVTAL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L ELA +E D E +++ E+ + +LLSGE D+ DA + V Sbjct: 72 RGRLDDLGVLYELAEDEGDEGSAAEADTERAKLREEISSLEVRTLLSGEYDARDALVTVR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A MLLRMY+RWAE+ + + + EEAGIKSAT + P AYG L Sbjct: 132 AEAGGVDAADFAEMLLRMYSRWAERHNYAVDVFDTSYAEEAGIKSATFRVTAPYAYGTLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + +EI E + R+D YR+SG GGQ Sbjct: 192 VEQGTHRLVRISPFDNQGRRQTSFAGVEVVPVVEQTDHVEIDEKELRVDVYRSSGPGGQG 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A +L+AKL LE Q++EE A + Sbjct: 252 VNTTDSAVRLTHIPTGIVVSCQNERSQLQNKATAMAVLQAKL--LERQRQEEQAKMDALK 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQMVKDLRT E +PS VLDG++DDF++A + +K Sbjct: 310 DSGSSWGNQMRSYVLHPYQMVKDLRTEHEVGNPSAVLDGEIDDFLEAGIRWRK 362 >gi|242242124|ref|ZP_04796569.1| peptide chain release factor 2 [Staphylococcus epidermidis W23144] gi|242234437|gb|EES36749.1| peptide chain release factor 2 [Staphylococcus epidermidis W23144] Length = 332 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 158/326 (48%), Positives = 220/326 (67%), Gaps = 1/326 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ ++ + L + +S ++ + + D EL EE D + +E Sbjct: 1 MTDPDFWNDQTKAQDIIDKNNALKSIVSGYYQLTNAVDDMSATRELLQEEYDEDMKKELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +Q+ + +++ + + LL G D+N+A LE+H GAGGTESQDWA MLLRMY R+ E+ Sbjct: 61 EEVQQFEEQIDQYELQLLLDGPHDANNAILELHPGAGGTESQDWAGMLLRMYQRYCEQNG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 FKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180 Query: 210 WVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ERS Sbjct: 181 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q KN+ A ML++KLY+L+L+++E+ + +IGWG QIRSYV PY MVKD RT Sbjct: 241 QIKNREAAMKMLKSKLYQLKLEEQEQEMAEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354 N E V+DG++ F++A L + Sbjct: 301 NEETGKVDAVMDGEIGPFIEAYLRKE 326 >gi|238019424|ref|ZP_04599850.1| hypothetical protein VEIDISOL_01293 [Veillonella dispar ATCC 17748] gi|237864123|gb|EEP65413.1| hypothetical protein VEIDISOL_01293 [Veillonella dispar ATCC 17748] Length = 330 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 170/325 (52%), Positives = 230/325 (70%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ + +E L NA+ K++ + D ++LE+A+EEDD S+ E Sbjct: 1 MSDPTFWDDPDKAREISQEATQLKNAVESYKQLVSDIEDANVMLEMAIEEDDRSLEGEIK 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 D +Q+I+ VE ++ LLSGE D+N+A L HAGAGGTE+QDW +ML+RMY RWAEK Sbjct: 61 DYVQQIEETVEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKAG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E ++ G+EAG KSAT LIKG NA+G+LK E+GVHRLVRISP+D+ +RRHTSF+++ Sbjct: 121 FSIELMDEQPGDEAGTKSATFLIKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD++EI I D ++DTYRASGAGGQH+N TDSAVR+TH PTG+VVQCQ +RSQ Sbjct: 181 DVMPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHRPTGIVVQCQTQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ QA +LRAKL+ELEL+K+ E+ + I WG QIRSYV PY +VKD RT Sbjct: 241 MQNREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DG+LD FM+ L + Sbjct: 301 VETGNVQSVMDGNLDQFMEGFLKKE 325 >gi|291445100|ref|ZP_06584490.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL 15998] gi|291348047|gb|EFE74951.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL 15998] Length = 368 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 155/353 (43%), Positives = 215/353 (60%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMGSIEAVLDLDALRADIAALEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA E D E L+ +K ++ + +LLSGE D+ +A + + Sbjct: 73 RGRIDDLEVLFELAEAEGDADAQAEAETELESVKKALDEMEVRTLLSGEYDAREALVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHNYKTEVYETAYAEEAGIKSTTFAVQVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ + N + Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMNALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEFEMGNPEAVFNGEIDGFVEAGIRWRK 364 >gi|319401169|gb|EFV89384.1| peptide chain release factor 2 [Staphylococcus epidermidis FRI909] Length = 332 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 158/326 (48%), Positives = 221/326 (67%), Gaps = 1/326 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ ++ + L + +S ++ + + D EL EE D + +E Sbjct: 1 MTDPDFWNDQTKAQDIIDKNNALKSIVSGYYQLTNAVDDMSATRELLQEEYDEDMKKELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +Q+ + +++ + + LL G D+N+A LE+H GAGGTESQDWA+MLLRMY R+ E+ Sbjct: 61 EEVQQFEEQIDQYELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYCEQNG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 FKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180 Query: 210 WVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ERS Sbjct: 181 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q KN+ A ML++KLY+L+L+++E+ + +IGWG QIRSYV PY MVKD RT Sbjct: 241 QIKNREAAMKMLKSKLYQLKLEEQEQEMAEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354 N E V+DG++ F++A L + Sbjct: 301 NEETGKVDAVMDGEIGPFIEAYLRKE 326 >gi|88607366|ref|YP_505078.1| peptide chain release factor 2, programmed frameshift [Anaplasma phagocytophilum HZ] gi|88598429|gb|ABD43899.1| peptide chain release factor 2 [Anaplasma phagocytophilum HZ] Length = 376 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 168/352 (47%), Positives = 232/352 (65%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ L + D L L+ + P LW + +AK L+ ER + ++ + Sbjct: 13 EIGEDLASIARCLDIVGLESTLESLDLECSSPSLWDDAEKAKSLLSERSRVSAVLTSFRV 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ D L E+ + DD L + LQ +KL + K+ E + S EAD+N +L + Sbjct: 73 LEKEHKDLAELAEMISDSDDRDFLATINAELQSLKLRISQKKTECMFSHEADANSCFLTI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +GAGGTES DW MLLRMYT+WAE +F E ++ DGEE G+K+ T+ I G AYGW Sbjct: 133 RSGAGGTESSDWVCMLLRMYTKWAESFHEFTVETVDSVDGEETGLKAVTVKICGIGAYGW 192 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 + E G+HRLVRISP+D ++RHTSF+S+ V PVVD I+I+I E D RIDTYRASGAGG Sbjct: 193 ARTESGIHRLVRISPFDHAAKRHTSFASVEVSPVVDHEIDIKILEKDLRIDTYRASGAGG 252 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVN T+SAVRITHIP+G+VVQCQ RSQH+N+A+A+++L+++LYE+ELQ++E+ Sbjct: 253 QHVNKTESAVRITHIPSGMVVQCQTSRSQHQNRAEAYSLLKSRLYEMELQEKEKRMAQDH 312 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +K EIGWG QIRSYV+ PY+MVKDLRT E + V++GDLD F+ A L Sbjct: 313 QNKCEIGWGHQIRSYVMHPYRMVKDLRTGHETGNVDAVMNGDLDAFITAALM 364 >gi|282903384|ref|ZP_06311275.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus C160] gi|282596339|gb|EFC01300.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus C160] Length = 331 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 159/326 (48%), Positives = 215/326 (65%), Gaps = 1/326 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +P+ W N +A+ ++ + L ++ K +Q + D +L EE D + ++ Sbjct: 1 MMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDGEMKEDL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + K +V+ + + LL G D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ Sbjct: 61 EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKK 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180 Query: 209 IWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH P+G+VV Q ER Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNER 240 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KN+ A ML++KLY+L+L+++ + EIGWG QIRSYV PY MVKD R Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAI 353 TN E V+DGD+ F+++ L Sbjct: 301 TNEETGKVDAVMDGDVGPFIESYLRQ 326 >gi|257785087|ref|YP_003180304.1| peptide chain release factor 2 [Atopobium parvulum DSM 20469] gi|257473594|gb|ACV51713.1| peptide chain release factor 2 [Atopobium parvulum DSM 20469] Length = 369 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 149/352 (42%), Positives = 206/352 (58%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ +L + G Q++S L ++ P+ W + A+ +M + L + ++ I Sbjct: 12 LAERLFEIEGYLHLAEKRQQISELEAESARPNFWDDAEAAQKIMTQLASLRDDVAGIDRA 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 +++L D EL E D + E+ ++ ++ + S + E D DA + + Sbjct: 72 KEKLGDAEAAFELGTELGDQASFDESRALAVSLEKDLSELELSSWFTDELDHGDAIVTIK 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 G GG ESQDW ML MY ++ ++R +K + + E G+ AT + G NAYG L+ Sbjct: 132 PGQGGLESQDWCEMLFHMYLKYCDRRGWKVDINDAPAAEVIGLDRATFTVSGKNAYGMLR 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQGVHRLVRISP D RR TSF+ + V PV+ + IE++I +D RID Y ASG GGQ Sbjct: 192 AEQGVHRLVRISPTDDKKRRQTSFAGVEVLPVLPEDIEVDIDPNDLRIDVYHASGPGGQG 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG VV CQ ERSQ +NKA A N+LR++LYE+E +KRE + Sbjct: 252 VNTTDSAVRITHIPTGTVVTCQNERSQLQNKAAAMNILRSRLYEIEKEKREAELDELRGP 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAI 353 K EI +G QIRSYVL PYQ++KDLRT E + V DGDLD F+ A Sbjct: 312 KREISFGNQIRSYVLYPYQLIKDLRTGAETGNVESVFSDGDLDQFIIAYHRW 363 >gi|116051698|ref|YP_789463.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa UCBPP-PA14] gi|115586919|gb|ABJ12934.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa UCBPP-PA14] Length = 332 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 180/329 (54%), Positives = 240/329 (72%), Gaps = 1/329 (0%) Query: 25 FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84 +N + EDP++W N A+ L RER L + + ++ L D+ LL++A+EEDD Sbjct: 3 EVNRELEDPNVWNNPEYAQNLGRERAQLAQVVETLDDLTSGLADSRDLLDMAVEEDDEGA 62 Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 + + ++ ++R++ +E +F + SGE D N+AYL++ AG+GGTE+QDWANMLLRMY RW Sbjct: 63 VDDVANEVERLREILEKLEFRRMFSGEMDPNNAYLDIQAGSGGTEAQDWANMLLRMYLRW 122 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 A+K F +E+ +GE AGIK AT+ IKG A+GWL+ E GVHRLVR SP+DS +RRHT Sbjct: 123 ADKHGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHT 182 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 SF++++V P +DD+IEIEI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH+PT VV CQ Sbjct: 183 SFTAVFVSPEIDDNIEIEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQ 242 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 ERSQH NK A MLRAKLYELE+QKR + E SK++IGWG QIRSYVL +K Sbjct: 243 NERSQHANKDTAMKMLRAKLYELEMQKRTAASQALEDSKSDIGWGHQIRSYVLD-QSRIK 301 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 DLRT IE++ VLDGDLD++++A+L Sbjct: 302 DLRTGIERSDCDKVLDGDLDEYLEASLKQ 330 >gi|302544934|ref|ZP_07297276.1| peptide chain release factor 2 [Streptomyces hygroscopicus ATCC 53653] gi|302462552|gb|EFL25645.1| peptide chain release factor 2 [Streptomyces himastatinicus ATCC 53653] Length = 370 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 157/353 (44%), Positives = 217/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + +L + +E+ Sbjct: 13 LSSTMGSIEAVLDLDKMRADIAVLEEQAAAPSLWDDPENAQKVTSKLSYLQGHLRRAEEL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA +E D E L ++ V+ + +LLSGE D+ +A + + Sbjct: 73 RGRIDDLEVLFELAADEGDEDARAEAEAELNAVRKAVDEMEVRTLLSGEYDAREAVVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEQLQRMYLRWAERHGYKTEIYETSYAEEAGIKSTTFAVQIPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ RID YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRIDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ ERSQ +N+A A N+L+AKL + Q+ + + + Sbjct: 253 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNRATAMNVLQAKLLDRRRQEEQAKMDALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P VLDG+LD F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGELDGFLEAGIRWRK 364 >gi|269128206|ref|YP_003301576.1| peptide chain release factor 2 [Thermomonospora curvata DSM 43183] gi|268313164|gb|ACY99538.1| peptide chain release factor 2 [Thermomonospora curvata DSM 43183] Length = 378 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 159/354 (44%), Positives = 222/354 (62%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D D ++ L ++ DP LW + A+ + R +L+N ++ + Sbjct: 12 ELGSTLTGIEAVLDLDAMRAEIAKLREESADPDLWSDQERAQQVTRRLSYLENELNRVTS 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D L ELA E DD E L+ ++ +++ + +L+SGE D +A + + Sbjct: 72 LRQRLEDVATLYELAEEMDDADTRAEADAELESLRKDIQQLEVRTLMSGEYDHREALITI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +A AGG ++ DWA L RMY RWAE+ + TE E EEAGIKS T +K P AYG L Sbjct: 132 NAQAGGVDAADWAQQLQRMYLRWAERHGYPTEIYETSYAEEAGIKSTTFAVKAPYAYGTL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 +GE G HRLVRISP+D+ RR TSF+ + V PVV+ S +E+ E+D RID YR+SG GGQ Sbjct: 192 RGEHGTHRLVRISPFDNQGRRQTSFAGLDVVPVVEQSDHVEVDENDLRIDVYRSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITHIPTG+VV CQ ERSQ +NKA A +L+AKL E + Q+ Sbjct: 252 GVNTTDSAVRITHIPTGIVVSCQNERSQLQNKATAMAVLKAKLLERKRQEEAAKMADLRG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 T WG QIR+YVL PYQ+VKDLRT +E +P+ VLDG++D+F++A + + Sbjct: 312 EGTS-SWGTQIRNYVLHPYQIVKDLRTGVESGNPAAVLDGEIDEFIEAEIRWLR 364 >gi|303241850|ref|ZP_07328345.1| peptide chain release factor 2 [Acetivibrio cellulolyticus CD2] gi|302590625|gb|EFL60378.1| peptide chain release factor 2 [Acetivibrio cellulolyticus CD2] Length = 340 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 160/329 (48%), Positives = 221/329 (67%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 + L K +P W ++ ++ ++++ + + + + D L EL LEEDD Sbjct: 5 IEELEQKASEPDFWNDIENSQKVLQKIKTMKEKLERYNRLTQEWEDAKTLCELGLEEDDE 64 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 S+ E D+ ++ K + E + E+LL G D N+A L +HAGAGGTE+QDW MLLRM+T Sbjct: 65 SVFTEVEDSFKKFKKDFEELRLETLLIGPYDKNNAILTLHAGAGGTEAQDWVQMLLRMFT 124 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 RW E + F L+ DGEEAGIKS T+ + G NAYG+LK E+GVHRLVRISP+D++ RR Sbjct: 125 RWGESKGFTVRILDYLDGEEAGIKSVTINVIGENAYGYLKSEKGVHRLVRISPFDASGRR 184 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSF+S V P + D +E+ I+ D RIDTYRASGAGGQH+N T+SA+RITHIPTGVVV Sbjct: 185 HTSFASCDVMPELSDDVEVNINPDDLRIDTYRASGAGGQHINKTESAIRITHIPTGVVVA 244 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 CQ ERSQ +NK A ML++KL E++ ++++E + + +I WG QIRSYV PY + Sbjct: 245 CQTERSQFQNKDTAMRMLKSKLLEIKEREQKEKIEDLKGIQMDIAWGSQIRSYVFCPYTL 304 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 VKD RTN E+ + +V+DGDLD F+ + L Sbjct: 305 VKDHRTNYEQINVDNVMDGDLDGFINSYL 333 >gi|126434177|ref|YP_001069868.1| peptide chain release factor 2 [Mycobacterium sp. JLS] gi|166225109|sp|A3PWV0|RF2_MYCSJ RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|126233977|gb|ABN97377.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp. JLS] Length = 371 Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats. Identities = 159/357 (44%), Positives = 226/357 (63%), Gaps = 8/357 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ L + + D D R+ L + DP+LW + A+ + E H N + ++E+ Sbjct: 12 LAATLTTVERVLDVDGLRDRIQKLEQEASDPNLWDDQSRAQKVTSELSHAQNELRRVEEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQ---ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + R+ D +L E+A EE+ E L ++++++E + +LLSGE D +A + Sbjct: 72 RQRVEDLPVLYEMAAEEEGQDAENAGAEADAELAKLRVDIEAMEVRTLLSGEYDEREAVV 131 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGG ++ DWA ML+RMY RWAE+ + E + EEAGIKSAT + P AYG Sbjct: 132 TIRSGAGGVDAADWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYG 191 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I++ E+D R+D YR+SG G Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDVPETDLRVDVYRSSGPG 251 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL +K++E Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKLLA---RKKQEERAAL 308 Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 ++ K + G WG Q+RSYVL PYQMVKDLRT E +PS VLDGD+D F++A + + Sbjct: 309 DALKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPSAVLDGDIDGFLEAGIRWR 365 >gi|89068846|ref|ZP_01156229.1| peptide chain release factor 2 [Oceanicola granulosus HTCC2516] gi|89045616|gb|EAR51679.1| peptide chain release factor 2 [Oceanicola granulosus HTCC2516] Length = 374 Score = 263 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 193/351 (54%), Positives = 237/351 (67%), Gaps = 2/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L L D + A RL N + EDP LW + A+ LMRERQ L ++I I Sbjct: 12 IEKSLALLAQRMDRETAPHRLEEFNARVEDPTLWDDPAAAQKLMRERQALVDSIETYDGI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN+ L+EL EDD ++ E L +K K+ E+LL GEAD ND +LE++ Sbjct: 72 ARELADNVELIELGEMEDDSEVVAEAEAALAALKERAAQKELEALLDGEADGNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA ML RMY RWAEKR +K E G EAGIKS + I GPNAYGWLK Sbjct: 132 AGAGGTEACDWAQMLQRMYVRWAEKRGYKVELQSEEAGTEAGIKSVSYKISGPNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+ +R TSF+S+WVYPVVDD+IEIEI+ S+ R+DTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPFGKGTR-ETSFASVWVYPVVDDNIEIEINPSEIRLDTYRSSGAGGQH 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV E+SQH+N+ A L+++LY++EL +R N + Sbjct: 251 VNTTDSAVRITHLPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRTADINAAHEA 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K GWG QIRSYVLQPYQMVKDLRT E + VLDG LD FM ATLA+ Sbjct: 310 KGSAGWGNQIRSYVLQPYQMVKDLRTGHETSDTGGVLDGALDGFMAATLAM 360 >gi|182438348|ref|YP_001826067.1| peptide chain release factor 2 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326778999|ref|ZP_08238264.1| Peptide chain release factor 2 [Streptomyces cf. griseus XylebKG-1] gi|238688991|sp|B1VV08|RF2_STRGG RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|178466864|dbj|BAG21384.1| putative peptide chain release factor 2 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326659332|gb|EGE44178.1| Peptide chain release factor 2 [Streptomyces cf. griseus XylebKG-1] Length = 368 Score = 263 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 154/353 (43%), Positives = 216/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMGSIEAVLDLDALRADIAALEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAETL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA +E D E L+ ++ ++ + +LLSGE D+ +A + + Sbjct: 73 RGRIDDLEVLFELAADEGDADAQAEAEAELESVRKALDEMEVRTLLSGEYDAREALVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHNYKTEVYETAYAEEAGIKSTTFAVQVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ + N + Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMNALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEFEMGNPEAVFNGEIDGFVEAGIRWRK 364 >gi|27467454|ref|NP_764091.1| peptide chain release factor RF-2 [Staphylococcus epidermidis ATCC 12228] gi|251810188|ref|ZP_04824661.1| peptide chain release factor 2 [Staphylococcus epidermidis BCM-HMP0060] gi|293368216|ref|ZP_06614845.1| peptide chain release factor RF2 [Staphylococcus epidermidis M23864:W2(grey)] gi|27314997|gb|AAO04133.1|AE016745_232 peptide chain release factor RF-2 [Staphylococcus epidermidis ATCC 12228] gi|251806240|gb|EES58897.1| peptide chain release factor 2 [Staphylococcus epidermidis BCM-HMP0060] gi|291317639|gb|EFE58056.1| peptide chain release factor RF2 [Staphylococcus epidermidis M23864:W2(grey)] Length = 332 Score = 263 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 155/326 (47%), Positives = 219/326 (67%), Gaps = 1/326 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ ++ + L + ++ ++ + + D EL EE D + E Sbjct: 1 MTDPDFWNDQTKAQDIIDKNNALKSIVNGYYQLTNAVDDMSATRELLQEEYDEDMKIELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +Q+ + +++ + + LL G D+N+A LE+H GAGGTESQDW +MLLRMY R+ E+ Sbjct: 61 EEVQQFEEQIDQYELQLLLDGPHDANNAILELHPGAGGTESQDWVSMLLRMYQRYCEQNG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 FKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180 Query: 210 WVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ERS Sbjct: 181 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q KN+ A ML++KLY+L+L+++E+ + +IGWG QIRSYV PY M+KD RT Sbjct: 241 QIKNREAAMKMLKSKLYQLKLEEQEQEMAEIRGEQKDIGWGSQIRSYVFHPYSMIKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354 N E V+DG++ F++A L + Sbjct: 301 NEETGKVDAVMDGEIGPFIEAYLRKE 326 >gi|315649817|ref|ZP_07902900.1| peptide chain release factor 2 [Paenibacillus vortex V453] gi|315274791|gb|EFU38172.1| peptide chain release factor 2 [Paenibacillus vortex V453] Length = 339 Score = 263 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 169/332 (50%), Positives = 224/332 (67%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 + K P W + +A+ L+ E + +++ +++Q D +++ ELA EE D Sbjct: 2 IENFEEKMAAPDFWDDNEKAQALIAEMNAVKSSVDQYQKLQQDYDDAVVMTELADEEGDD 61 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 S+ E + ++ + VE + + LL+ D +A LE+H GAGGTESQDW ML RMYT Sbjct: 62 SLAGEIGETIKDLVKRVEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLHRMYT 121 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 RWAEKR FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RR Sbjct: 122 RWAEKRGFKVETLDYLPGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDSSGRR 181 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSF S V P ++D IE++I D +IDTYRASGAGGQH+NTTDSAVRITH+PTGVVV Sbjct: 182 HTSFVSCDVVPEINDEIELDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGVVVT 241 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 CQ ERSQ KN+ +A MLR+KLYE +++++++ ++EI WG QIRSYV PY M Sbjct: 242 CQNERSQIKNRERAMTMLRSKLYERKIEEQKKELAEIRGEQSEIAWGSQIRSYVFHPYSM 301 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KD RT +E + V+DGDLD F+ L + Sbjct: 302 AKDHRTQVETGNIGAVMDGDLDAFIDGYLRSQ 333 >gi|282875665|ref|ZP_06284536.1| peptide chain release factor 2 [Staphylococcus epidermidis SK135] gi|281295692|gb|EFA88215.1| peptide chain release factor 2 [Staphylococcus epidermidis SK135] gi|329723235|gb|EGG59765.1| peptide chain release factor 2 [Staphylococcus epidermidis VCU144] gi|329736827|gb|EGG73092.1| peptide chain release factor 2 [Staphylococcus epidermidis VCU028] gi|329737925|gb|EGG74149.1| peptide chain release factor 2 [Staphylococcus epidermidis VCU045] Length = 333 Score = 263 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 155/327 (47%), Positives = 219/327 (66%), Gaps = 1/327 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 DP W + +A+ ++ + L + ++ ++ + + D EL EE D + E Sbjct: 1 MMTDPDFWNDQTKAQDIIDKNNALKSIVNGYYQLTNAVDDMSATRELLQEEYDEDMKIEL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + +Q+ + +++ + + LL G D+N+A LE+H GAGGTESQDW +MLLRMY R+ E+ Sbjct: 61 EEEVQQFEEQIDQYELQLLLDGPHDANNAILELHPGAGGTESQDWVSMLLRMYQRYCEQN 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 GFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180 Query: 209 IWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ER Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KN+ A ML++KLY+L+L+++E+ + +IGWG QIRSYV PY M+KD R Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQEQEMAEIRGEQKDIGWGSQIRSYVFHPYSMIKDHR 300 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354 TN E V+DG++ F++A L + Sbjct: 301 TNEETGKVDAVMDGEIGPFIEAYLRKE 327 >gi|116329128|ref|YP_798848.1| peptide chain release factor 2 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330263|ref|YP_799981.1| peptide chain release factor 2 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122281974|sp|Q04V47|RF2_LEPBJ RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|122283090|sp|Q04YD0|RF2_LEPBL RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|116121872|gb|ABJ79915.1| Peptide chain release factor 2 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116123952|gb|ABJ75223.1| Peptide chain release factor 2 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 367 Score = 263 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 165/351 (47%), Positives = 228/351 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + RL LN K+EDP LW N EA+++ +++ L+ ++ Sbjct: 15 ELQENFLNRWKLLNLEQDKDRLKALNEKSEDPDLWNNPEEARIVSQKKNELEKKLTPWFT 74 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 IQ + D L+EL L+E + + E S R++ + E + L D A+L + Sbjct: 75 IQQDILDFPDLVELTLDEKGENGIGELSMEYNRLQEKFEELELLGALKNSEDLKPAFLNI 134 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA MLLRMY R+ EK+ ++ ++I G+ AGIK+ TL + G A+G+L Sbjct: 135 HPGAGGTESQDWAEMLLRMYIRYFEKKGYQYSLIDIQAGDGAGIKNVTLHVVGDFAFGFL 194 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE G+HRLVRISP+D+N RRHTSF S+ V P +DD I+I+I E D R+D YR+SGAGGQ Sbjct: 195 KGENGIHRLVRISPFDANKRRHTSFVSVHVSPEIDDEIDIKIEEKDIRVDVYRSSGAGGQ 254 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+P+G+VV CQ ERSQ KN+ A+ ML+A+LYE+E +K +E Sbjct: 255 HVNTTDSAVRITHLPSGIVVACQNERSQIKNRDTAFKMLKARLYEMEQEKAKEELEKKSG 314 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K +I WG QIRSYV PY +VKD RT+ E + + V+DGD++ F+ A L Sbjct: 315 EKKDIAWGSQIRSYVFHPYNLVKDHRTDHETGNVAAVMDGDIEPFILAYLK 365 >gi|261367680|ref|ZP_05980563.1| peptide chain release factor 2 [Subdoligranulum variabile DSM 15176] gi|282570473|gb|EFB76008.1| peptide chain release factor 2 [Subdoligranulum variabile DSM 15176] Length = 373 Score = 263 bits (671), Expect = 4e-68, Method: Composition-based stats. Identities = 153/351 (43%), Positives = 228/351 (64%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + ++ L + + +RL+ L + P + + +++ ++ E + N + ++ Sbjct: 14 MKTSVDDLRDALSIEASEKRLAELEHQMTLPGFYDDQEKSQRVISEMGEVKNKLERFGKL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + LLE+ EE+D S+ E ++ ++ ++ Q ++L+GE D N+A L H Sbjct: 74 STQYEEAETLLEMIEEENDPSLASEGEQAVEGVEKAIDELQLMTMLNGEYDHNNAILTFH 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG GGTE+QDWA ML RMYTRWAE + E L++ DG+EAGIKSA+++IKG NAYG LK Sbjct: 134 AGTGGTEAQDWAEMLYRMYTRWAEAHGYSVEVLDVLDGDEAGIKSASMMIKGANAYGMLK 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N+RR TSF+S+ V P ++D+I+IEI+ +D + YR+SGAGGQH Sbjct: 194 SEHGVHRLVRISPFDANARRQTSFASLEVMPELNDNIQIEINPADIEMQVYRSSGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T SAVR+ H PTG+V CQ +RSQ +N+ A M++AKLY++ LQ+ ++ + + Sbjct: 254 INKTSSAVRLIHKPTGIVTSCQTQRSQLQNREYAMEMMKAKLYQIALQQHKDKIDDIKGV 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + EI WG QIRSYV PY +VKD RTN E + V+DGDLD F+ A L Sbjct: 314 QNEIAWGHQIRSYVFMPYTLVKDHRTNYESGNVQAVMDGDLDGFIYAYLKA 364 >gi|218660225|ref|ZP_03516155.1| peptide chain release factor 2 [Rhizobium etli IE4771] Length = 350 Score = 263 bits (671), Expect = 4e-68, Method: Composition-based stats. Identities = 237/328 (72%), Positives = 284/328 (86%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 N K EDP+LW + EA+ LMRERQ LD+ I+ +K+++ +L DN+ L+EL EE D S+++ Sbjct: 2 NNKAEDPNLWNDASEAQKLMRERQQLDDGINGVKQLEQQLNDNIELIELGEEEGDQSVVK 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E D L+ +K E +Q E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWAE Sbjct: 62 EAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWAE 121 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 +++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSF Sbjct: 122 RQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSF 181 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 SSIWVYPVVDDSI+IEI+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VVQCQQE Sbjct: 182 SSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQE 241 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQHKN+A+AW+MLRA++YE EL+KRE+ AN +SKT+IGWG QIRSYVLQPYQ+VKDL Sbjct: 242 RSQHKNRAKAWDMLRARMYEAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKDL 301 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RT + T+P DVLDGDL++FM+A LA + Sbjct: 302 RTGVASTAPDDVLDGDLNEFMEAALAHR 329 >gi|258651861|ref|YP_003201017.1| peptide chain release factor 2 [Nakamurella multipartita DSM 44233] gi|258555086|gb|ACV78028.1| peptide chain release factor 2 [Nakamurella multipartita DSM 44233] Length = 369 Score = 263 bits (671), Expect = 4e-68, Method: Composition-based stats. Identities = 156/353 (44%), Positives = 220/353 (62%), Gaps = 4/353 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D + + L+ P LW + A+ + H + IK++ Sbjct: 12 LDTTLTSIEKVMDVDRLARSIDELSEAASAPDLWNDQENAQKVTSRLSHAQAELKRIKDL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L EL ++D E L ++ E++ ++ +LLSGE D +A + + Sbjct: 72 RQRLDDLEVLFEL--GDEDPDTYLEAQQELLGLQKEIDAQEVRTLLSGEYDEREALVTIR 129 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A ML+RMY RW+E+ + TE + EEAGIKS T +K P AYG L Sbjct: 130 SEAGGVDAADFAEMLMRMYLRWSERHGYNTEVYDTSYAEEAGIKSTTFQVKAPYAYGTLS 189 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ S +++ E D R+D YR+SG GGQ Sbjct: 190 VEQGTHRLVRISPFDNQGRRQTSFAGVEVAPVVETSDHVDVDEKDLRVDVYRSSGPGGQG 249 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A +L++KL LE +++EE A + Sbjct: 250 VNTTDSAVRITHLPTGIVVSCQNERSQIQNKASAMAVLQSKL--LERRRQEERAVMDALK 307 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 T WG Q+RSYVL PYQMVKDLRTN E +PS V DG++DDF++A + ++ Sbjct: 308 DTGNSWGNQMRSYVLHPYQMVKDLRTNFEVGNPSAVFDGEIDDFIEAGIRWRR 360 >gi|229821252|ref|YP_002882778.1| peptide chain release factor 2 [Beutenbergia cavernae DSM 12333] gi|259585260|sp|C5BYB6|RF2_BEUC1 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|229567165|gb|ACQ81016.1| peptide chain release factor 2 [Beutenbergia cavernae DSM 12333] Length = 374 Score = 263 bits (671), Expect = 4e-68, Method: Composition-based stats. Identities = 149/353 (42%), Positives = 219/353 (62%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R++ L+ P LW + A+ + H + + + + Sbjct: 12 LRGTLEQITAVTDPDALRARIAELSEAAAAPDLWDDPDAAQKVTSRLSHTQSELERLDTL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D L++LA EEDD L E L +I+ + + +LL+GE DS +A + + Sbjct: 72 RSRIDDLETLVQLAAEEDDADTLAEAEAELTKIRTSMGELEVRTLLAGEYDSREAVVTIR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ D+A MLLRMY RWAE++ + T+ L+ EEAG+KSAT +K P A+G L Sbjct: 132 SGAGGVDAADFAEMLLRMYLRWAERKGYPTQVLDTSYAEEAGLKSATFEVKVPYAFGTLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ + I+I E+D RID +R+SG GGQ Sbjct: 192 VEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDHIDIPETDIRIDVFRSSGPGGQS 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV Q E+SQ +N+A A +L+++L ++ Sbjct: 252 VNTTDSAVRITHLPTGIVVSMQNEKSQIQNRAAAMRVLQSRLLLAMQEEENAKKKELAGD 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVLQPYQMVKDLRT E +PS V DGD+DDF++A + ++ Sbjct: 312 -VKASWGDQMRSYVLQPYQMVKDLRTEHEVGNPSAVFDGDIDDFIEAGIRWRR 363 >gi|229164123|ref|ZP_04292059.1| Peptide chain release factor 2 [Bacillus cereus R309803] gi|228619359|gb|EEK76249.1| Peptide chain release factor 2 [Bacillus cereus R309803] Length = 326 Score = 263 bits (671), Expect = 4e-68, Method: Composition-based stats. Identities = 165/325 (50%), Positives = 215/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 W + A++++ E L + +++ + + I EL EE D + +E Sbjct: 1 MMGAGFWDDQQGAQVVINEANALKEMVGKFRKLDETFENLEITHELLKEEYDEDLHEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR Sbjct: 61 AEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D +EIEI D +IDTYRASGAGGQH+NTTDSAVRITH PT VV CQ ERSQ Sbjct: 181 EVVPEFNDEVEIEIRSEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG++D F+ A L + Sbjct: 301 TEVGNVQAVMDGEIDPFIDAYLRSR 325 >gi|169335448|ref|ZP_02862641.1| hypothetical protein ANASTE_01862 [Anaerofustis stercorihominis DSM 17244] gi|169258186|gb|EDS72152.1| hypothetical protein ANASTE_01862 [Anaerofustis stercorihominis DSM 17244] Length = 364 Score = 263 bits (671), Expect = 4e-68, Method: Composition-based stats. Identities = 166/351 (47%), Positives = 232/351 (66%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + ++L+ + G + + L T D W +A +++E + L + I+ + Sbjct: 14 IDKELSDIAGSINIKSLKDELVKKETLMNDESFWNENDKANKILKEVKSLKSQINSYSSL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + D +L+E+ E+ + + L ++ E++ ++LLSGE DSN+A L +H Sbjct: 74 EYKKDDISVLVEMLQEDFSQNEADSAMEELLELEKELKVFTIDTLLSGEYDSNNAILSIH 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA MLLRM+ R+AEKRKFK + LE G+ AGIKS TLLI G NAYG+LK Sbjct: 134 PGAGGTESQDWAEMLLRMFIRFAEKRKFKIKILEQLPGDIAGIKSVTLLISGDNAYGYLK 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE+GVHRLVRISP+DSNSRRHTSF+S+ V P + + I +EI+ SD +IDTYRA GAGGQH Sbjct: 194 GEKGVHRLVRISPFDSNSRRHTSFASVDVEPEIKEDINLEINPSDLKIDTYRAGGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSAVRITH+PT +VV CQ ERSQ +NK A +L+ KLY++ +++ +E + + Sbjct: 254 VNKTDSAVRITHLPTKIVVSCQNERSQFQNKETAMKILKGKLYKILMEEHKEKIDEIKGD 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +I WG QIRSYV PY MVKD RT E ++ V+DGD++ F+ A L + Sbjct: 314 YGQIAWGNQIRSYVFHPYSMVKDHRTKTETSNVQSVMDGDINIFIDAFLKM 364 >gi|325849490|ref|ZP_08170771.1| peptide chain release factor 2 [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480110|gb|EGC83185.1| peptide chain release factor 2 [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 369 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 160/354 (45%), Positives = 229/354 (64%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + L +G D DN + + +T + W + +A+ +M + + Sbjct: 13 ELDKNLKMIGAHLDPDNLFVEIKNIEKETLKENFWDDSQKAQEIMADLSDKKDDYKTFIN 72 Query: 62 IQDRLCDNLILLELALE-EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 +++ L D L+++ E ++ L + ++L +K E+ + ++ L GE D N+AY+ Sbjct: 73 LKEELKDQSDLIDIIEETNEELDSLVDVENSLNMLKKEISSFKIKTELDGEYDRNNAYMV 132 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +HAGAGG E+ DWA ML+RMYTR+ E+R FK + ++++ E GIKSAT+ IKG AYG+ Sbjct: 133 IHAGAGGLEATDWAEMLMRMYTRFFERRNFKFDITDLNNEEAGGIKSATIHIKGSFAYGY 192 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LKGE+GVHRLVRISP+DS+ RRHTSF+SI ++P ++D + +EI D RIDTYRASGAGG Sbjct: 193 LKGERGVHRLVRISPFDSSKRRHTSFASIDIFPELNDDMSVEIDPKDLRIDTYRASGAGG 252 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVN TDSAVRITHIPTGV+ Q ERSQ +NK A +L AKL +++ ++ E + Sbjct: 253 QHVNKTDSAVRITHIPTGVIASSQAERSQTQNKETAMKLLLAKLTQIKEEEHREKIEDIQ 312 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + T+I WG QIRSYV PY +VKD RTN E + V+DGD+D F+ A LA K Sbjct: 313 GNYTQIAWGSQIRSYVFHPYTLVKDHRTNFEVGNVESVMDGDIDGFIDAYLANK 366 >gi|54026461|ref|YP_120703.1| peptide chain release factor 2 [Nocardia farcinica IFM 10152] gi|76363350|sp|Q5YR52|RF2_NOCFA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|54017969|dbj|BAD59339.1| putative peptide chain release factor 2 [Nocardia farcinica IFM 10152] Length = 372 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 152/356 (42%), Positives = 220/356 (61%), Gaps = 4/356 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + +R+ L + DP LW + A+ + E H + +++ Sbjct: 11 ELDATLKTVESVLDIEELRRRIDELEHQAADPDLWNDQDHAQRVTSELSHAQGELRRVED 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAY 118 ++ RL D +L ELA E+ + + + +VE + +LLSGE D +A Sbjct: 71 LRRRLEDLPVLYELAEGEEGEARTAALEEADAERAALHSDVEAMEVRTLLSGEYDKREAL 130 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + + +GAGG ++ DWA ML+RMY RWA++ + E + EEAGIKSAT +K P AY Sbjct: 131 VNIRSGAGGVDAADWAEMLMRMYIRWADRHGYPVEVYDTSYAEEAGIKSATFAVKTPYAY 190 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G L E G HRLVRISP+D+ RR TSF+ + V PVV+ + IE+ E++ R+D YR+SG Sbjct: 191 GTLSVEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIEVPETEIRVDVYRSSGP 250 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTTDSAVRITHIPTG+VV CQ E+SQ +NK A +L+AKL E + Q+ + Sbjct: 251 GGQSVNTTDSAVRITHIPTGIVVTCQNEKSQLQNKISAMRVLQAKLLERKRQEERAEMDA 310 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 ++++ WG Q+RSYVL PYQMVKDLRTN E +PS VL+GD+D F+++ + + Sbjct: 311 LKTNEG-ASWGNQMRSYVLHPYQMVKDLRTNYEVNNPSAVLNGDIDGFIESGIRWR 365 >gi|257457828|ref|ZP_05622987.1| peptide chain release factor 2 [Treponema vincentii ATCC 35580] gi|257444541|gb|EEV19625.1| peptide chain release factor 2 [Treponema vincentii ATCC 35580] Length = 363 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 164/351 (46%), Positives = 220/351 (62%), Gaps = 4/351 (1%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L GG+FD + +R++ W + +A+ L+ E + L N I + + + Sbjct: 2 LTKFGGVFDSEAVKKRIAEKEAVAGQEGFWNDPKKAEKLLTEIKKLKNRIEPWETLIADI 61 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL---SGEADSNDAYLEVHA 123 D L EL E D + +K E + + L S E D +DA+L VHA Sbjct: 62 EDLQTLYELTQEAGDADNADSVQEIDMSLKELQERFEKLNTLALLSDEVDGSDAFLTVHA 121 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+ DWA ML RMY RWAE+R F E L+ + +E G+KS TL I+G AYG+LK Sbjct: 122 GAGGTEACDWAQMLTRMYLRWAERRGFSVETLDELEADE-GLKSITLQIRGDYAYGFLKA 180 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRL+RISP+D+N+RRHTSFSS++V+PV+DD+IE+ I D R+DTYRA GAGGQHV Sbjct: 181 ETGVHRLIRISPFDANARRHTSFSSVYVFPVLDDTIEVNIRPEDLRVDTYRAGGAGGQHV 240 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N TDSAVR+TH+PTG+VV CQ ERSQ N+A A +ML+A+LYE ++E+ + K Sbjct: 241 NKTDSAVRLTHLPTGIVVACQNERSQISNRATAMSMLKARLYEYYRNEKEKENAKFAAEK 300 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 I WG QIRSY+ QPY MVKD RT E + V+DGD+D F++ L + Sbjct: 301 KGISWGNQIRSYIFQPYTMVKDHRTKHETGNIQAVMDGDIDGFIEDFLKKQ 351 >gi|126735602|ref|ZP_01751347.1| peptide chain release factor 2 [Roseobacter sp. CCS2] gi|126714789|gb|EBA11655.1| peptide chain release factor 2 [Roseobacter sp. CCS2] Length = 374 Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats. Identities = 194/352 (55%), Positives = 244/352 (69%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L L D + A RL N + EDP LW + A+ LMRERQ L +A+ I Sbjct: 12 IEKSLALLAQRMDRETAPHRLEEFNARVEDPTLWDDPEAAQKLMRERQLLVDAMGNYDSI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L DN+ L+EL E+D ++ E L ++ + K+ E+LL GEAD ND +LE++ Sbjct: 72 NQELSDNIELIELGEMEEDAEVVAEAEAALVKLADKAAKKELEALLDGEADGNDTFLEIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWANML RMY RWAEK+ +K E G+EAGIKSA+ I G NAYGWLK Sbjct: 132 AGAGGTESCDWANMLARMYVRWAEKKGYKVELQAEQSGDEAGIKSASYKISGHNAYGWLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ +D R+DTYR+SGAGGQH Sbjct: 192 SESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPADIRLDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL KR + N + Sbjct: 252 VNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAIKALKSRLYQMELDKRSTLVNEAHEN 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + GWG QIRSYVLQPYQMVKDLRTN E + VLDGDLD M ATLA+ Sbjct: 311 AGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGLMAATLAMD 362 >gi|108798578|ref|YP_638775.1| peptide chain release factor 2 [Mycobacterium sp. MCS] gi|119867678|ref|YP_937630.1| peptide chain release factor 2 [Mycobacterium sp. KMS] gi|123070429|sp|Q1BBL5|RF2_MYCSS RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|166225110|sp|A1UDD2|RF2_MYCSK RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|108768997|gb|ABG07719.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp. MCS] gi|119693767|gb|ABL90840.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp. KMS] Length = 371 Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats. Identities = 159/357 (44%), Positives = 226/357 (63%), Gaps = 8/357 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ L + + D D R+ L + DP+LW + A+ + E H N + ++E+ Sbjct: 12 LAATLTTVERVLDVDGLRDRIQKLEQEASDPNLWDDQSRAQKVTSELSHAQNELRRVEEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQ---ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + R+ D +L E+A EE+ E L ++++++E + +LLSGE D +A + Sbjct: 72 RQRVEDLPVLYEMAAEEEGQDAENAGAEADAELAKLRVDIEAMEVRTLLSGEYDEREAVV 131 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGG ++ DWA ML+RMY RWAE+ + E + EEAGIKSAT + P AYG Sbjct: 132 TIRSGAGGVDAADWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYG 191 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I++ E+D R+D YR+SG G Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDVPETDLRVDVYRSSGPG 251 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL +K++E Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKLLA---RKKQEERAEL 308 Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 ++ K + G WG Q+RSYVL PYQMVKDLRT E +PS VLDGD+D F++A + + Sbjct: 309 DALKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPSAVLDGDIDGFLEAGIRWR 365 >gi|282865194|ref|ZP_06274247.1| peptide chain release factor 2 [Streptomyces sp. ACTE] gi|282560117|gb|EFB65666.1| peptide chain release factor 2 [Streptomyces sp. ACTE] Length = 368 Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats. Identities = 155/353 (43%), Positives = 215/353 (60%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + HL + + + Sbjct: 13 LSSTMGSIEAVLDLDALRADIAALEEQAAAPSLWDDPEAAQKITSRLSHLQAEVRKTEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA +E D L E L ++ ++ + +LLSGE D+ +A + + Sbjct: 73 RGRIDDLGVLFELAEDEGDADALAEAEAELVSVRKALDEMEVRTLLSGEYDAREAVVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFTVQVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ + N + Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMNALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEFEIGNPEAVFNGEIDGFIEAGIRWRK 364 >gi|182419781|ref|ZP_02951021.1| peptide chain release factor 2 [Clostridium butyricum 5521] gi|237666525|ref|ZP_04526510.1| peptide chain release factor 2 [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376329|gb|EDT73911.1| peptide chain release factor 2 [Clostridium butyricum 5521] gi|237657724|gb|EEP55279.1| peptide chain release factor 2 [Clostridium butyricum E4 str. BoNT E BL5262] Length = 347 Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats. Identities = 147/341 (43%), Positives = 212/341 (62%), Gaps = 1/341 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 FD + L L K ++P W + +A+ + ++ + + + I +++ +L D +L Sbjct: 6 HFDRAGLEKELHELECKMQEPGFWDDSKKAEEVTKKSKLIKDKIENYDKLKSQLDDIDVL 65 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 ++ E+D S + E + LLSGE D N+A + +H G GGT++ D Sbjct: 66 KDIMEEDDIESANEIIQTIKSIEHEI-EDYNMKILLSGEYDKNNAIVTLHVGVGGTDAND 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 W MLLRMYTRW E + + E +++ G+EAGIKS TL + G YG+LK E+G+HRLVR Sbjct: 125 WTEMLLRMYTRWCENKGYSVETIDLIAGDEAGIKSVTLKVTGEYVYGYLKAEKGIHRLVR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISPY++N +R TSF+S+ V P + +I I D ++DTYR+SG+GGQH+N TDSAVRI Sbjct: 185 ISPYNANGKRQTSFASMEVLPELTKEQDITIRPDDLKVDTYRSSGSGGQHINKTDSAVRI 244 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 THIPTG+VVQCQ ERSQ N+ A ML++KL EL+ + +E ++GWG QI Sbjct: 245 THIPTGIVVQCQNERSQFSNRETAMEMLKSKLVELKERAHKEKIEDLTGELKDMGWGSQI 304 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 RSYV PY MVKD RTN+E ++ + V+DGD+D F+ A L Sbjct: 305 RSYVFHPYSMVKDHRTNVETSNVNGVMDGDIDLFINAFLKQ 345 >gi|118473158|ref|YP_886446.1| peptide chain release factor 2 [Mycobacterium smegmatis str. MC2 155] gi|166225108|sp|A0QU58|RF2_MYCS2 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|118174445|gb|ABK75341.1| peptide chain release factor 2 [Mycobacterium smegmatis str. MC2 155] Length = 368 Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats. Identities = 162/354 (45%), Positives = 221/354 (62%), Gaps = 5/354 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R+ L DP+LW + A+ + + H N + ++ + Sbjct: 12 LDTTLTTVERVLDVDGLRNRIEQLEKDASDPNLWDDQTRAQKVTSDLSHAQNELRRVEGL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L ELA E + E L +++ ++E + +LLSGE D +A + + Sbjct: 72 RQRLDDLPVLYELAAEAGGPDEVAEADAELAKLREDIEAMEVRTLLSGEYDEREAVVTIR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ DWA ML+RMY RWAEK + E + EEAGIKSAT + P AYG L Sbjct: 132 SGAGGVDAADWAEMLMRMYIRWAEKHDYPVEIFDTSYAEEAGIKSATFAVHAPFAYGTLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + IEI E+D R+D YR+SG GGQ Sbjct: 192 VEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIEIPENDIRVDVYRSSGPGGQS 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL E +KR E ++ Sbjct: 252 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLE---RKRLEERAELDAL 308 Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K + G WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F++A + + Sbjct: 309 KGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPASVLDGDIDGFLEAGIRWR 362 >gi|256820726|ref|YP_003142005.1| peptide chain release factor 2 [Capnocytophaga ochracea DSM 7271] gi|256582309|gb|ACU93444.1| bacterial peptide chain release factor 2 (bRF- 2) [Capnocytophaga ochracea DSM 7271] Length = 367 Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats. Identities = 154/351 (43%), Positives = 231/351 (65%), Gaps = 2/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L L FD D +S KT P W N EA+ +MRE + + +E Sbjct: 10 LVNRLGALRRYFDVDAKRIEISNEEEKTFAPDFWDNAKEAEKVMRELRTKKKWVEDYEEA 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ D +LL+ E + + + +E +F ++LS E D+ A L++ Sbjct: 70 ENLTSDIEVLLDFFKEGEATAEDVDHQYTQALHAIEAL--EFRNMLSDEGDTMSAVLQIT 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+MLLRMYT W +K+K + L +G+ AG+K+ T+ I+G A+G+LK Sbjct: 128 AGAGGTESCDWASMLLRMYTMWCNNQKYKVKTLNFQEGDVAGVKTVTIEIEGEYAFGYLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVRISP+DSN++RHTSF+S++VYP+VDD+IEI+I+ +D +T R+SGAGGQ+ Sbjct: 188 GENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIDINPADITFETMRSSGAGGQN 247 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++AVR+ H PTG++++ + RSQ NK +A +L+++LYE+EL+KR+ + E+ Sbjct: 248 VNKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQLLKSQLYEIELKKRQAKRDEIEAG 307 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K +I WG QIR+YV+ PY++VKD+RTN E T V++G+LD+F+KA L + Sbjct: 308 KMKIEWGSQIRNYVMHPYKLVKDVRTNYESTDVDSVMNGELDEFLKAYLML 358 >gi|313679114|ref|YP_004056853.1| bacterial peptide chain release factor 2 (brf-2) [Oceanithermus profundus DSM 14977] gi|313151829|gb|ADR35680.1| bacterial peptide chain release factor 2 (bRF-2) [Oceanithermus profundus DSM 14977] Length = 370 Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats. Identities = 161/353 (45%), Positives = 213/353 (60%), Gaps = 5/353 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++L+ LGG+FD RL L + LW + A+ L +E L + ++ Sbjct: 5 ELKQKLDALGGIFDIAGKKARLEELEKELGQEGLWDDPAAAQKLTQEAARLKKVVEEYEQ 64 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L + L + A E+ S L+ ++E ++LL E +A L + Sbjct: 65 LSGDLESLIELWDEASPEERES----LEPELEEAAKKLEDLYHQTLLGFEHAEKNAILTI 120 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 GAGGTE+ DWA MLLRMYTRWAE+ FK E +++ G EAGI SA L+++G NAYG L Sbjct: 121 KPGAGGTEAMDWAEMLLRMYTRWAERHGFKVELVDVTPGPEAGIDSAELIVRGENAYGLL 180 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E+GVHRLVR SP+DS RRHTSF+S+ V P VDD++EIEI D RID +RA G GGQ Sbjct: 181 SAERGVHRLVRPSPFDSTGRRHTSFASVEVSPEVDDTVEIEIKPEDLRIDVFRAQGHGGQ 240 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRI H+PTG++V Q RSQHKNK A +L+++L+E E QKR+E Sbjct: 241 GVNTTDSAVRIVHLPTGIIVTSQATRSQHKNKELAMKVLKSRLFEREWQKRQEEMAKLRG 300 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + I WG QIRSYVL VKD RT + + P VLDGDLDD + A L + Sbjct: 301 EQKAIEWGSQIRSYVLDKQ-YVKDHRTGLMRHDPDKVLDGDLDDLIWAGLEWR 352 >gi|227514375|ref|ZP_03944424.1| peptide chain release factor RF2 [Lactobacillus fermentum ATCC 14931] gi|227087241|gb|EEI22553.1| peptide chain release factor RF2 [Lactobacillus fermentum ATCC 14931] Length = 355 Score = 262 bits (670), Expect = 5e-68, Method: Composition-based stats. Identities = 168/347 (48%), Positives = 219/347 (63%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 ++ GGLFD D + ++ + P W + A+ + L +QD++ Sbjct: 1 MHASGGLFDLDALNESIAQGENEMTAPDFWDDNQRAQEKVAALNELKKRRDNFLTLQDQV 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 + + E+ E D + E DN ++ + + E LL G D +DA LE+H GAG Sbjct: 61 EELALTAEMLQAEPDPELKAELDDNFPGVQEHLRAYRLEQLLDGPYDQSDAILEIHPGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDW MLLRMY RWA + F E GEEAGIKS TLLIKG NAYG+L E+G Sbjct: 121 GTEAQDWGEMLLRMYMRWANQHGFAVETANYEAGEEAGIKSVTLLIKGHNAYGYLHPEKG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+DS +RRHTSF+S+ V P++D+SIE+EI SD R+DT+RASGAGGQH+N T Sbjct: 181 VHRLVRISPFDSAARRHTSFASVDVMPILDESIEVEIDPSDLRVDTFRASGAGGQHINKT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITH+PTG+V Q ERSQ +N+ A NML++KLYELE +K+ + E + EI Sbjct: 241 ESAVRITHLPTGIVTSSQAERSQLQNRITAMNMLKSKLYELEEEKKAKERAQIEGEQREI 300 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 GWG QIRSYV PY +VKD RT E V+DGDLD F+ A L Sbjct: 301 GWGSQIRSYVFHPYTLVKDARTGYETHDVIGVMDGDLDPFINAYLQW 347 >gi|160931692|ref|ZP_02079086.1| hypothetical protein CLOLEP_00523 [Clostridium leptum DSM 753] gi|156869337|gb|EDO62709.1| hypothetical protein CLOLEP_00523 [Clostridium leptum DSM 753] Length = 374 Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 158/348 (45%), Positives = 231/348 (66%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + L + + + L P W ++ +++ +++ L N +S + + Sbjct: 18 IKDLKEALGLEAMKKEIGELEEAQTSPDFWDDMEKSQKIIQRTSMLKNKVSAYETLVSGY 77 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D L L+E+ EE+D SIL + +++++ E+E ++ +LL+GE D+N+A L HAGAG Sbjct: 78 EDALTLIEMGDEEEDLSILPDAQQEVEKVRKELEEQRLATLLTGEYDANNAILTFHAGAG 137 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWA ML RMY RW E+ FK + L+ DGEEAG+KSA +LI+G NAYG+LK E G Sbjct: 138 GTEAQDWAEMLYRMYCRWGERHNFKVKTLDYLDGEEAGLKSAVVLIEGLNAYGYLKSEAG 197 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR+SP+D++ RRHTSF+S+ V P +++ +E+EI+ D ++D YRASGAGGQ VN T Sbjct: 198 VHRLVRVSPFDASGRRHTSFASLEVMPEINEDVEVEIAPEDIKMDVYRASGAGGQKVNKT 257 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+THIPTG+VV CQ ERSQH+N+ A ML +KL E++ ++ + + + + EI Sbjct: 258 SSAVRLTHIPTGIVVSCQVERSQHQNREVAMKMLASKLMEIKEREHLDKISDIKGVQKEI 317 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 GWG QIRSYV PY + KD RTN E + + V+DGD+D F+ A L + Sbjct: 318 GWGSQIRSYVFMPYTLAKDHRTNYEMGNINAVMDGDIDGFINAYLKQE 365 >gi|256750898|ref|ZP_05491782.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus CCSD1] gi|256750233|gb|EEU63253.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus CCSD1] Length = 330 Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 162/325 (49%), Positives = 220/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP+ W ++ +++ L + ++ L + + + D L+EL LEE D SI E Sbjct: 1 MADPNFWNDIKKSQELAKRQKELKELLEEYNSLVTKWEDLSTLIELGLEEGDESITDEVD 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +K ++E + ++LL+G D N+A L +HAG+GGTE+QDWA MLLRMYTRWA + Sbjct: 61 KEYKELKKKLEDLKIKTLLNGLYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ E L+ GEEAGIKS TL+IKGP AYG+LK E GVHRLVRISP+D+ RRHTSF+ + Sbjct: 121 FEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + + IE+EI D +IDTYRASGAGGQ+VN T+SAVRITH+PTG+VV CQ ERSQ Sbjct: 181 EVLPELKNDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A ML+AKL +L +++++E + E WG QIRSYV QPY +VKD RTN Sbjct: 241 IQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG++D F+ A L K Sbjct: 301 YEVGNVQAVMDGEIDGFINAYLKQK 325 >gi|212710038|ref|ZP_03318166.1| hypothetical protein PROVALCAL_01091 [Providencia alcalifaciens DSM 30120] gi|212687245|gb|EEB46773.1| hypothetical protein PROVALCAL_01091 [Providencia alcalifaciens DSM 30120] Length = 329 Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 177/327 (54%), Positives = 227/327 (69%), Gaps = 1/327 (0%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 N + E P +W A+ L +ER L+ + I ++ + D LLELA+E DD Sbjct: 2 NAELEQPDVWNEPERAQALGKERSSLEAIVETIDQLTQGIEDVEGLLELAVEADDEETFN 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E L ++ ++E +F + SGE DS D Y+++ AG+GGTE+QDWA+ML+RMY RWAE Sbjct: 62 EAGAELDALQGKLEQLEFRRMFSGEYDSADCYIDLQAGSGGTEAQDWASMLMRMYLRWAE 121 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + FKTE +E DG+ AG+KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSF Sbjct: 122 SKGFKTEIIEESDGDVAGLKSATIKIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSF 181 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 SS ++YP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ + Sbjct: 182 SSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQND 241 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQHKNK QA L+AKLYELE+QK+ E +K++IGWG QIRSYVL +KDL Sbjct: 242 RSQHKNKDQAMRQLKAKLYELEMQKKNADKQAMEENKSDIGWGSQIRSYVLDD-ARIKDL 300 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAI 353 RT +E + VLDGDLD F++A+L Sbjct: 301 RTGVETRNTQAVLDGDLDKFIEASLKA 327 >gi|78485070|ref|YP_390995.1| peptide chain release factor 2 [Thiomicrospira crunogena XCL-2] gi|78363356|gb|ABB41321.1| bacterial peptide chain release factor 2 (bRF-2) [Thiomicrospira crunogena XCL-2] Length = 332 Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 170/329 (51%), Positives = 231/329 (70%), Gaps = 1/329 (0%) Query: 25 FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84 + + EDP +W + A+ L +E+ LDN ++ I++++ L +LE+A + D + Sbjct: 3 EVERELEDPTVWNDPERAQALGKEKSQLDNVVTTIQDLESSLESAHEILEMAEMDADQEM 62 Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 + E L R++ ++E +F+ + SGE D+N+ YLE+ AG+GGTE+QDWANM+LRMY RW Sbjct: 63 VDEVVSELARLEEKLEQLEFQRMFSGELDANNCYLEIQAGSGGTEAQDWANMILRMYLRW 122 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 AE FK E LEI G+ AGIK AT+ ++G A+GWL+ E GVHRLVR SP+DS +RRHT Sbjct: 123 AESHGFKAEILEISAGDVAGIKGATVHVQGDYAFGWLRTETGVHRLVRKSPFDSGNRRHT 182 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 SF+S+++ P +DDS E+EI+ +D RID YRASGAGGQHVN T+SAVRITH+PT V QCQ Sbjct: 183 SFASVFISPEIDDSFEVEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTNTVTQCQ 242 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 RSQH+NKA+A LRAKLYELE+ R E +K++IGWG QIRSYVL +K Sbjct: 243 NGRSQHQNKAEAMKQLRAKLYELEMLSRNAEKQEMEENKSDIGWGSQIRSYVLD-SGRIK 301 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 DLRTN+E + + VLDGDLD F+ +L Sbjct: 302 DLRTNVETGNTNGVLDGDLDQFIIPSLKA 330 >gi|302325967|gb|ADL25168.1| peptide chain release factor 2 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 389 Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 144/341 (42%), Positives = 220/341 (64%), Gaps = 1/341 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD + + L L + DP+LW + +A+ +M++ +L I KE+ D Sbjct: 42 GGIFDLEAKTEELYVLEKDSGDPNLWNDQEKAQSMMKKIGNLKGLIDSWKEVSQTCDDLA 101 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L E++ +E+ + ++ +K VE +F+ +L+G D+ + +H GAGGTES Sbjct: 102 ELYEMSKDEESADLTATLESDIADLKSRVEAMEFKKMLNGPDDACACLMSIHPGAGGTES 161 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA ML RMYT + E+ K + ++ + E+AG+KSAT+ + NAYG L+ E GVHRL Sbjct: 162 QDWALMLFRMYTHFFEREKMDFKVVDFQEAEDAGLKSATIEVSCENAYGLLRSEIGVHRL 221 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+D+N+RRHTSF+++++YP + +E ++ S+ R+DTYR+SGAGGQ++N TDSAV Sbjct: 222 VRISPFDANARRHTSFTAVYLYP-EHEDVEFDLDMSEVRVDTYRSSGAGGQYINKTDSAV 280 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+TH+PTG++ CQ ERSQ +N+ + ML+ + E + E + + K ++ WG Sbjct: 281 RMTHLPTGIMASCQTERSQIQNRETCYKMLKTMVAEHYRLEEEAKRDARMAEKKKVEWGS 340 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIRSYVLQPYQ+VKDLRT +E + + VLDG + F+ A L Sbjct: 341 QIRSYVLQPYQLVKDLRTGVETSDTAGVLDGKIKPFIDAYL 381 >gi|239623407|ref|ZP_04666438.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239522373|gb|EEQ62239.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 338 Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 157/324 (48%), Positives = 218/324 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E+P W N ++ ++RE ++L + + +E++ D +++++ EE+D S++ E Sbjct: 1 MEEPGFWDNPEKSTRMVREAKNLKDEVETFRELEQEYEDIQVMIQMGYEENDASLIPEIE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L +E + + LLSGE DSN+A L ++AGAGGTES DW +ML RMY RWAEK+ Sbjct: 61 EMLGHFSDTLEKMRMKLLLSGEYDSNNAILRLNAGAGGTESCDWCSMLYRMYCRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FKTE L+ DG+EAGIKS T+ I G NAYG+L+ E GVHRLVRISP+++ +R TSF S Sbjct: 121 FKTEVLDFLDGDEAGIKSVTVQINGENAYGYLRSEHGVHRLVRISPFNAAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + P + + I+IEI+ D RIDTYR+SGAGGQH+N T SA+RITH P+G VV CQ ERSQ Sbjct: 181 DIMPDIQEDIDIEINPDDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGTVVTCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK +A ML++KL+ L+ +++ A + GWG QIRSYVLQPY MVKD RT Sbjct: 241 FQNKDKAMQMLKSKLFLLKQEEQAAKAAGIRGDVKDNGWGSQIRSYVLQPYTMVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + VLDG++D F+ A L Sbjct: 301 EESGNVDAVLDGNIDSFISAYLRW 324 >gi|326389631|ref|ZP_08211197.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus JW 200] gi|325994346|gb|EGD52772.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus JW 200] Length = 330 Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 161/325 (49%), Positives = 221/325 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W ++ +++ L ++++ L + + + D L+EL L+E D SI E Sbjct: 1 MSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLNTLIELGLDEGDESITDEVD 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +K ++E + ++LL+G D N+A L +HAG+GGTE+QDWA MLLRMYTRWA + Sbjct: 61 KEYKELKKKLEDLKIKTLLNGPYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ E L+ GEEAGIKS TL+IKGP AYG+LK E GVHRLVRISP+D+ RRHTSF+ + Sbjct: 121 FEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ IE+EI D +IDTYRASGAGGQ+VN T+SAVRITH+PTG+VV CQ ERSQ Sbjct: 181 EVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A ML+AKL +L +++++E + E WG QIRSYV QPY +VKD RTN Sbjct: 241 IQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG++D F+ A L K Sbjct: 301 YEVGNVQAVMDGEIDGFINAYLKQK 325 >gi|313888002|ref|ZP_07821680.1| peptide chain release factor 2 [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845957|gb|EFR33340.1| peptide chain release factor 2 [Peptoniphilus harei ACS-146-V-Sch2b] Length = 371 Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 176/344 (51%), Positives = 236/344 (68%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 LG + D+ +++ LN K +P W + A+ ++RE I ++ D + Sbjct: 20 KSLGESLEIDSLKEKVVELNKKQMEPGFWDDNESAQKVIRETNSYQRKIDQYDKLIDLIT 79 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L+ L E+D S + + + I+ + + +LL+GE DS+DA L +HAGAGG Sbjct: 80 DAEDLIALMEIEEDYSSYSDFQELVDEIEKDTAEFKLNTLLNGEYDSHDAILSIHAGAGG 139 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDWA+MLLRMYTR+AE + FK E L++ +EAGIKS TL I G NAYG+LKGE+GV Sbjct: 140 TEAQDWASMLLRMYTRYAENKGFKVETLDLLKEDEAGIKSVTLKISGDNAYGYLKGEKGV 199 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVRISP+DSN RRHTSFSS+ V+P +DD E+EI + + +IDTYR+SGAGGQHVNTTD Sbjct: 200 HRLVRISPFDSNKRRHTSFSSVDVFPEIDDDTEVEIKDEELKIDTYRSSGAGGQHVNTTD 259 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTG+VVQCQ ERSQ +N+ +A NML+AKL L ++++E + + ++I Sbjct: 260 SAVRITHIPTGIVVQCQNERSQIQNREKAMNMLKAKLVALAEEEKKEKIEDLQGNYSQIA 319 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG QIRSYV QPY MVKD RTN++ V+DGDLD F+ A L Sbjct: 320 WGSQIRSYVFQPYTMVKDHRTNVDVGDVEKVMDGDLDIFINAYL 363 >gi|288905693|ref|YP_003430915.1| peptide chain release factor 2 [Streptococcus gallolyticus UCN34] gi|306831789|ref|ZP_07464945.1| peptide chain release factor RF2 [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325978722|ref|YP_004288438.1| peptide chain release factor 1 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732419|emb|CBI13991.1| peptide chain release factor 2 [Streptococcus gallolyticus UCN34] gi|304425987|gb|EFM29103.1| peptide chain release factor RF2 [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178650|emb|CBZ48694.1| Peptide chain release factor 1 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 336 Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 152/336 (45%), Positives = 208/336 (61%), Gaps = 2/336 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L K +P W + I A+ +E L E+Q+ + + LE+ E Sbjct: 1 MEEDIALLENKMTEPDFWNDNIAAQKTSQELNGLKQTYETFNEMQELSDETELYLEMLDE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 +D E S + + LLS D N+A LE+H G+GGTE+QDWA+ML Sbjct: 61 DDSVQAELEESLEKLD--KIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADMLF 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTR+ + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS Sbjct: 119 RMYTRYGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSFSS+ V P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIPTG Sbjct: 179 AKRRHTSFSSVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV +R+Q+ N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFT 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RT E V+DGD+D F+ A L + Sbjct: 299 PYTMVKDHRTGYEVAQVDKVMDGDIDGFIDAYLKWR 334 >gi|77918851|ref|YP_356666.1| peptide chain release factor 2 [Pelobacter carbinolicus DSM 2380] gi|77544934|gb|ABA88496.1| bacterial peptide chain release factor 2 (bRF-2) [Pelobacter carbinolicus DSM 2380] Length = 326 Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 174/322 (54%), Positives = 232/322 (72%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W++ +A+ +++ER L+ ++ +E Q L D +L +L E D + L+E S Sbjct: 1 MSRPGFWESGDQAQDILKERTGLEKLVTSFRESQQELEDLQLLADLGAESGDEATLEEIS 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L ++ V+ +F +LSGE DS DA ++AGAGGTE+QDWA+MLLRMY R+ EK+ Sbjct: 61 ALLPDLQRRVDKMEFARMLSGEHDSCDAIFSINAGAGGTEAQDWADMLLRMYMRYFEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E + G+EAGIK ATL + G AYGWL+ E G+HRLVRISP+DSN+RRHTSF S+ Sbjct: 121 FKAELTDHQPGDEAGIKGATLTVSGDYAYGWLRAEIGIHRLVRISPFDSNARRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 +V+P + D +E++I+E D ++DTYR+SGAGGQHVN TDSA+RITH+P+G+VV CQ ERSQ Sbjct: 181 FVFPELPDDVEVDINEKDLKVDTYRSSGAGGQHVNKTDSAIRITHVPSGIVVACQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 HKN+A A L+A+LYELEL+K+EE A+ K EIGWG QIRSYVL PY+MVKD RTN Sbjct: 241 HKNRATAMKQLKARLYELELRKKEEEASAIAGEKMEIGWGSQIRSYVLHPYRMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E + VLDGDLD F++A L Sbjct: 301 FESGNADAVLDGDLDGFIEAYL 322 >gi|27262208|gb|AAN87385.1| bacterial peptide chain release factor 2 [Heliobacillus mobilis] gi|111074980|gb|ABH04839.1| bacterial peptide chain release factor 2 [Heliobacillus mobilis] Length = 341 Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 162/335 (48%), Positives = 229/335 (68%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 +R++ L DP W++ +A+ M+E L + + ++ + D +L EL E Sbjct: 4 KEERIAELELMITDPTFWEDQEQAQKTMQELTGLKDKVKSFFDLYQKWEDLGVLRELGAE 63 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E+D ILQE + +Q I+ E++ + LL+G D N+A + +HAGAGGTE+ DW ML+ Sbjct: 64 EEDPDILQEIEEGIQTIQSELDRWHLQLLLNGPYDRNNALVTLHAGAGGTEAMDWNEMLM 123 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RW EK+ +K + L+ G+EAG+KSATL G NAYG+LKGE GVHRLVRISP+D+ Sbjct: 124 RMYIRWGEKKGYKVDILDSLAGDEAGMKSATLSFSGENAYGYLKGEMGVHRLVRISPFDA 183 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 + RRHTSF+S+ V P V D I+I+I+ D ++DT+RASGAGGQHVN T+SAVRITHIPTG Sbjct: 184 SGRRHTSFASVEVLPEVSDDIDIQINSEDLKVDTFRASGAGGQHVNKTESAVRITHIPTG 243 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV CQ ERSQ +N+A A ML+AKL+E + Q++ + N + + +I +G QIRSYV Sbjct: 244 IVVACQSERSQIQNRATAMRMLQAKLFERQRQEQADEVNRLKGDQQDIAFGSQIRSYVFH 303 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 PY +VKD RTN E + +V+DG++DDF+ A + Sbjct: 304 PYNLVKDHRTNCEVGAVYNVMDGEIDDFVSAYMIW 338 >gi|257893004|ref|ZP_05672657.1| peptide chain release factor 2 [Enterococcus faecium 1,231,408] gi|257829383|gb|EEV55990.1| peptide chain release factor 2 [Enterococcus faecium 1,231,408] Length = 338 Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 163/335 (48%), Positives = 224/335 (66%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ K +P W + A+ ++ E + + L + +++E+ E Sbjct: 1 MEEDIAEAEAKMAEPGFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVEMLQE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D ++ +E + + +++ + LL G D N+A +E+H GAGGTESQDW +MLL Sbjct: 61 EPDAAMQEEAETRINALDEKMKTYELSMLLDGPYDRNNAIVELHPGAGGTESQDWGSMLL 120 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTRWAE+ ++ E L+ G+EAGIKS TLLIKG NA+G+LK E+GVHRLVRISP+DS Sbjct: 121 RMYTRWAEQHGYQVETLDYQAGDEAGIKSVTLLIKGHNAFGYLKSEKGVHRLVRISPFDS 180 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSF S+ V P +D++I+IEI+ D +IDTYRASGAGGQH+N T+SAVRITH+PTG Sbjct: 181 AKRRHTSFCSVDVMPELDETIDIEINPDDLKIDTYRASGAGGQHINKTESAVRITHLPTG 240 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 VV Q +RSQ KN+ QA ML+AKLY+LE++K+E+ A + EIGWG QIRSYV Sbjct: 241 TVVASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQIRSYVFH 300 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 PY MVKD RTN+E + V+DGDLD F+ L + Sbjct: 301 PYSMVKDHRTNVETGNVQAVMDGDLDLFIDGYLKM 335 >gi|227821685|ref|YP_002825655.1| peptide chain release factor 2 [Sinorhizobium fredii NGR234] gi|227340684|gb|ACP24902.1| peptide chain release factor 2 protein [Sinorhizobium fredii NGR234] Length = 342 Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 230/328 (70%), Positives = 280/328 (85%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 N K EDP LW + EA+ LMRERQ LD++I+ ++ + +L DN+ L+EL EE D +I+ Sbjct: 2 NNKAEDPTLWNDAGEAQKLMRERQQLDDSITGLRRFEQQLSDNIELIELGEEEGDSAIVT 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E + L++++ E KQ E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMY+RWAE Sbjct: 62 EAEEALRQLRNEASKKQVEAMLSGEADQNDTYLEVHSGAGGTESQDWANMLLRMYSRWAE 121 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 ++ +K E +EI DGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSF Sbjct: 122 RQGYKVELMEIQDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSF 181 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 SSIWVYPVVDDSI+I+I+E DCRIDTYR+SGAGGQHVNTTDSAVRITH+P+G+VVQCQQE Sbjct: 182 SSIWVYPVVDDSIQIDINEGDCRIDTYRSSGAGGQHVNTTDSAVRITHMPSGIVVQCQQE 241 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQHKN+A+AW+MLRA+LYE EL+KRE+ AN +SKT+IGWG QIRSYVLQPYQ+VKDL Sbjct: 242 RSQHKNRAKAWDMLRARLYEAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKDL 301 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RT +E TSP DVLDG+L++FM+A LA + Sbjct: 302 RTGVESTSPGDVLDGELNEFMEAALAHR 329 >gi|254445589|ref|ZP_05059065.1| peptide chain release factor 2 [Verrucomicrobiae bacterium DG1235] gi|198259897|gb|EDY84205.1| peptide chain release factor 2 [Verrucomicrobiae bacterium DG1235] Length = 368 Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 154/354 (43%), Positives = 210/354 (59%), Gaps = 3/354 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + + GG+FD D + L + W + A+ ++ + ++ + Sbjct: 1 MKSEPDTYGGIFDVDKKKTEIGELEAQMSAEGFWNDQKAAQAVIAQANLAKGVVNGMTAF 60 Query: 63 QDRLCD---NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 +L D LL ++ +E +K E++ + + L+ D +A L Sbjct: 61 MAKLDDARAMEELLNEEGVDELSDEAEELQAAAVALKEELDELEIQCYLNKPHDRCNALL 120 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 V+AGAGGTES DWA +L RMY+RWAE+R FK E +++ GEEAG+ TL I G NA+G Sbjct: 121 SVNAGAGGTESCDWAELLYRMYSRWAERRGFKVEVVDMLPGEEAGLDKVTLRIVGENAFG 180 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 + E+GVHRLVRISP+DS RRHTSF ++ V ++D IEIEI D R DTYR+SG G Sbjct: 181 YANAERGVHRLVRISPFDSQKRRHTSFCAVDVVAEIEDDIEIEIEAKDLREDTYRSSGKG 240 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQHVN TDSAVR+THIPTG+V CQ +RSQHKN++ A ML+A+LYE ++ Sbjct: 241 GQHVNKTDSAVRLTHIPTGIVAACQSDRSQHKNRSAAMKMLKARLYERMEDEKRSAMEKM 300 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K EIGWG QIRSYV QPYQMVKDLRT +E + V+DGD+D F+ L Sbjct: 301 YGEKGEIGWGNQIRSYVFQPYQMVKDLRTGVETGNIQAVMDGDIDRFVSGWLRA 354 >gi|312140591|ref|YP_004007927.1| peptide chain release factor prfb [Rhodococcus equi 103S] gi|325675787|ref|ZP_08155471.1| peptide chain release factor RF2 [Rhodococcus equi ATCC 33707] gi|311889930|emb|CBH49247.1| peptide chain release factor PrfB [Rhodococcus equi 103S] gi|325553758|gb|EGD23436.1| peptide chain release factor RF2 [Rhodococcus equi ATCC 33707] Length = 367 Score = 262 bits (669), Expect = 6e-68, Method: Composition-based stats. Identities = 157/355 (44%), Positives = 226/355 (63%), Gaps = 6/355 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + +R+ L + DP LW + A+ + + H + + ++E Sbjct: 11 ELDTTLTTVEKVLDVEELRRRIDELEHQASDPELWNDQEHAQQVTSQLSHAQSELRRVEE 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D +L ELA E + + + +++ ++E + +++LSGE D DA + + Sbjct: 71 LRSRLDDMAVLYELAEE-EGPEAVADAHAERAQLRTDIEAMEVKTMLSGEYDQRDALVNI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG ++ DWA ML+RMY RWAEKR + E + EEAGIKSAT +K P +YG L Sbjct: 130 RAGAGGVDAADWAEMLMRMYIRWAEKRGYGVEVYDTSYAEEAGIKSATFAVKAPYSYGTL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+ + V PVV+ + I+I E+D R+D YR+SG GGQ Sbjct: 190 SIEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIDIDENDVRVDVYRSSGPGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+TH+PTG+VV CQ E+SQ +NK A +L+AKL E +KR+E ++ Sbjct: 250 SVNTTDSAVRLTHVPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLE---RKRQEERAEMDA 306 Query: 302 SKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K + G WG Q+RSYVL PYQMVKDLRT E +PS VLDG++D F++A + + Sbjct: 307 LKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVNNPSAVLDGEIDGFIEAGIRWR 361 >gi|282848898|ref|ZP_06258288.1| peptide chain release factor 2 [Veillonella parvula ATCC 17745] gi|282581403|gb|EFB86796.1| peptide chain release factor 2 [Veillonella parvula ATCC 17745] Length = 330 Score = 262 bits (669), Expect = 7e-68, Method: Composition-based stats. Identities = 166/325 (51%), Positives = 232/325 (71%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W N +A+ + +E L NA+ K++ + D ++LE+A++EDD S+ E Sbjct: 1 MSDPTFWDNPDKAREISQEATQLKNAVESYKQLVSDIEDANMMLEMAIDEDDLSMESEIK 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +++I+ +E ++ LLSGE D+N+A L HAGAGGTE+QDW +ML+RMY RWAEK Sbjct: 61 EYVKQIEETLEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKSG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E ++ G+EAGIKSAT L+KG NA+G+LK E+GVHRLVRISP+D+ +RRHTSF+++ Sbjct: 121 FSIELMDEQPGDEAGIKSATFLVKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD++EI I D ++DTYRASGAGGQH+N TDSAVR+TH PTG+VVQCQ +RSQ Sbjct: 181 DVMPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQTQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ QA +LRAKL+ELEL+K+ E+ + I WG QIRSYV PY +VKD RT+ Sbjct: 241 MQNREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHRTS 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DG+LD F++ L + Sbjct: 301 VETGNVQAVMDGNLDPFVEGFLKKE 325 >gi|167038149|ref|YP_001665727.1| peptide chain release factor 2 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|166856983|gb|ABY95391.1| peptide chain release factor 2 [Thermoanaerobacter pseudethanolicus ATCC 33223] Length = 330 Score = 262 bits (669), Expect = 7e-68, Method: Composition-based stats. Identities = 162/325 (49%), Positives = 221/325 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W ++ +++ L ++++ L + + + D L+EL LEE D SI E Sbjct: 1 MSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLSTLIELGLEEGDESITDEVD 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +K ++E + ++LL+G D N+A L +HAG+GGTE+QDWA MLLRMYTRWA + Sbjct: 61 KEYKELKKKLEDLKIKTLLNGPYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ E L+ GEEAGIKS TL+IKGP AYG+LK E GVHRLVRISP+D+ RRHTSF+ + Sbjct: 121 FEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ IE+EI D +IDTYRASGAGGQ+VN T+SAVRITH+PTG+VV CQ ERSQ Sbjct: 181 EVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A ML+AKL +L +++++E + E WG QIRSYV QPY +VKD RTN Sbjct: 241 IQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG++D F+ A L K Sbjct: 301 YEVGNVQAVMDGEIDGFINAYLKQK 325 >gi|254437327|ref|ZP_05050821.1| peptide chain release factor 2 [Octadecabacter antarcticus 307] gi|198252773|gb|EDY77087.1| peptide chain release factor 2 [Octadecabacter antarcticus 307] Length = 375 Score = 262 bits (669), Expect = 7e-68, Method: Composition-based stats. Identities = 192/354 (54%), Positives = 252/354 (71%), Gaps = 1/354 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 +++ + L+ L +WD A RL N + EDP LW + A+ LMR+RQ L +AI+ + Sbjct: 10 VEIEKSLSLLAQRMEWDTASHRLEEFNARVEDPTLWDDPEAAQKLMRDRQSLVDAIASYE 69 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 I+ L D++ L+E+ EDD I+ E + L+ + + K+ E+LL+GEAD+ND +LE Sbjct: 70 VIKQELSDHIELIEMGEMEDDSDIVTEAEEALKVLAAKAAKKELEALLNGEADANDTFLE 129 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +++GAGGTE+ DWA ML RMY RWAE++ +K + GEE GIKSA+ I G NAYGW Sbjct: 130 INSGAGGTEACDWAAMLARMYIRWAERKGYKVDLQSESAGEEVGIKSASYKISGHNAYGW 189 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD RIDTYR+SGAGG Sbjct: 190 LKSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGG 249 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVNTTDSAVRITH PTG+VV E+SQH+N+ A L+++LY++EL KR + N Sbjct: 250 QHVNTTDSAVRITHAPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQIELDKRSALVNEVH 308 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + + GWG QIRSYVLQPYQMVKDLRT E + VLDGDLD FM ATLA+ Sbjct: 309 ENAGDAGWGNQIRSYVLQPYQMVKDLRTRHETSDTQGVLDGDLDAFMGATLAMD 362 >gi|86133579|ref|ZP_01052161.1| peptide chain release factor 2 [Polaribacter sp. MED152] gi|85820442|gb|EAQ41589.1| peptide chain release factor 2 [Polaribacter sp. MED152] Length = 367 Score = 262 bits (669), Expect = 7e-68, Method: Composition-based stats. Identities = 147/351 (41%), Positives = 225/351 (64%), Gaps = 2/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +S +++ L + D + ++ KT +P W + A+++M+E + + I Sbjct: 10 ISTRIDKLKSYLEIDKKLIEIANEEEKTANPDFWNDPKAAELVMKELRFKKKWVEDYNTI 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 D ++ E E++ +E +F+++LS E DS A +++ Sbjct: 70 IRLNEDLIVFYEFYKEDEADEKDVVQQYEKT--IALLEDIEFKNMLSDEGDSLSAVIQIT 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA ML RMYT W+EK+ FK + L G+ AGIK+ T+ ++G A+GWLK Sbjct: 128 AGAGGTESCDWAEMLFRMYTMWSEKQGFKLKTLNYQAGDAAGIKTVTVEVEGDYAFGWLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVRISP+DSN++RHTSF+S++VYPV DDSIEI+I+ +D I T R+SGAGGQ+ Sbjct: 188 GENGVHRLVRISPFDSNAKRHTSFASVYVYPVADDSIEIDINPADIEITTARSSGAGGQN 247 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++ V++TH P+G+ + C RSQH N+A A ML+++LYE+ELQK++ + E++ Sbjct: 248 VNKVETKVQLTHKPSGIQISCSNSRSQHDNRATAMQMLKSQLYEIELQKQQAARDDIEAN 307 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K + WG QIR+YV+ PY++VKD+RT E + V+DG+++ F+KA L + Sbjct: 308 KMKNEWGSQIRNYVMHPYKLVKDVRTAHETGNVDAVMDGNINAFLKAYLML 358 >gi|72162878|ref|YP_290535.1| peptide chain release factor 2 [Thermobifida fusca YX] gi|71916610|gb|AAZ56512.1| bacterial peptide chain release factor 2 (bRF-2) [Thermobifida fusca YX] Length = 375 Score = 262 bits (669), Expect = 7e-68, Method: Composition-based stats. Identities = 158/352 (44%), Positives = 220/352 (62%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ L + + D D + L ++ DP LW + A+ + R L++ +S ++ Sbjct: 12 ELTSTLENIEAVLDLDAKRTEIEQLREQSADPELWNDQANAQKVTRRLSFLESEVSKVEN 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ R+ D +L ELA E+D L E L ++ ++ + +LLSG D +A + + Sbjct: 72 IRSRIDDLGVLFELAAAENDAETLAEARRELAALRKDISDLEVRTLLSGPYDEREALISI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +A AGG ++ DW ML RMY RWAE+ + TE E EEAGIKS T ++K P AYG L Sbjct: 132 NAQAGGVDAADWTQMLQRMYLRWAERHGYPTEIYETSYAEEAGIKSTTFVVKAPYAYGML 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 +GE G HRLVRISP+D+ SRR TSF+ + V PVV+ S IEI ES+ RID YR+SG GGQ Sbjct: 192 RGEHGTHRLVRISPFDNQSRRQTSFAGVDVVPVVEQSDHIEIDESELRIDVYRSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PTG+VV CQ ERSQ +N+A A ++L+AKL E + Q+ E Sbjct: 252 GVNTTDSAVRITHLPTGIVVSCQNERSQLQNRATAMSILQAKLLERKRQEEEAELAALRG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG Q+R+YVL PYQ VKD+RT +E + S VLDG++D+F+ A + Sbjct: 312 ESAR-AWGTQMRNYVLHPYQSVKDIRTGVETGNTSAVLDGEIDEFINAGIRW 362 >gi|304407676|ref|ZP_07389327.1| peptide chain release factor 2 [Paenibacillus curdlanolyticus YK9] gi|304343159|gb|EFM09002.1| peptide chain release factor 2 [Paenibacillus curdlanolyticus YK9] Length = 329 Score = 262 bits (668), Expect = 7e-68, Method: Composition-based stats. Identities = 156/325 (48%), Positives = 215/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + +A+ ++ E + + + +++ D +LE+ EE D S E + Sbjct: 1 MTAPDFWDDNDKAQAVISEMNAVKSTVEKYEKLAGDHDDLSTMLEMVEEEGDDSFESELT 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + ++ + + + LL+ D +A LE+H GAGGTESQDW ML RMYTRWAEK Sbjct: 61 EGVESLVKRISDFELTLLLNQPYDKLNAILELHPGAGGTESQDWGQMLYRMYTRWAEKSG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS T+ IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVELLDYLPGDEAGIKSVTISIKGYNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P ++D IEIEI D ++DTYRASGAGGQHVN T+SA+RITHIP+G++V CQ +RSQ Sbjct: 181 DVMPEIEDDIEIEIRTEDLKVDTYRASGAGGQHVNKTESAIRITHIPSGIIVACQTQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ QA MLR+KLYE +++++++ +++I WG QIRSYV PY MVKD RT+ Sbjct: 241 IQNREQAMKMLRSKLYERKIEEQQKHLAEIRGEQSDIAWGSQIRSYVFHPYSMVKDHRTS 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DGDLD F+ L + Sbjct: 301 VETGNVGAVMDGDLDAFIDGYLRSQ 325 >gi|262203335|ref|YP_003274543.1| peptide chain release factor 2 [Gordonia bronchialis DSM 43247] gi|262086682|gb|ACY22650.1| peptide chain release factor 2 [Gordonia bronchialis DSM 43247] Length = 371 Score = 262 bits (668), Expect = 7e-68, Method: Composition-based stats. Identities = 157/357 (43%), Positives = 224/357 (62%), Gaps = 8/357 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D + +R+ L + DP LW + A+ + E H + + E+ Sbjct: 12 LDATLTTVEKVLDLEELRRRIDELEMQASDPDLWNDQEHAQKVTSELSHAQSEFRKVSEL 71 Query: 63 QDRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + RL D +L EL +D S L + + ++ ++E + +++L+GE D DA + Sbjct: 72 RQRLDDLPVLYELAEAEEGDDRVSALADADADRAALRADIEAMEVKTMLAGEYDQRDALV 131 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGG ++ DWA ML+RMY RWAE+ + E + EEAG+KSAT +K P YG Sbjct: 132 NIRSGAGGVDAADWALMLMRMYIRWAEQHGYGVEVYDTSYAEEAGLKSATFAVKAPYMYG 191 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L EQG HRLVRISP+D+ SRR TSF+ + V PVV + I+I E+D ++D YR+SG G Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVQTTDHIDIDENDVKVDVYRSSGPG 251 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+TH+PTG+VV CQ E+SQ +NKA A +L+AKL E +KR+E Sbjct: 252 GQSVNTTDSAVRLTHLPTGIVVTCQNEKSQLQNKASAMRVLQAKLLE---RKRQEERAEL 308 Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 ++ K + G WG Q+RSYVL PYQMVKDLRT +E +PS VLDG+LD F++A + + Sbjct: 309 DALKGDGGSSWGNQMRSYVLHPYQMVKDLRTGVEDNNPSAVLDGELDKFIEAGIRWR 365 >gi|319951472|ref|ZP_08025281.1| peptide chain release factor 2 [Dietzia cinnamea P4] gi|319434864|gb|EFV90175.1| peptide chain release factor 2 [Dietzia cinnamea P4] Length = 368 Score = 262 bits (668), Expect = 8e-68, Method: Composition-based stats. Identities = 154/352 (43%), Positives = 217/352 (61%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + D D +R+ L DP LW + A+ + E ++ + +E+ Sbjct: 12 LDATMTTVEKVLDIDELARRVDELEQMAADPDLWNDQDRAQKVTSELSYIQADLRRCREL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D ++ ELA E + ++E ++ +VE + +++LSGE D +A + + Sbjct: 72 RQRIEDLPLMYELAEE-EGGDAVEEADAERASLREDVEAMEVKTMLSGEYDQREAVVNIR 130 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A ML+RMY RWAEK K E + EEAGIKSAT ++K P YG L Sbjct: 131 AGAGGVDAADFAEMLMRMYVRWAEKNGHKVEVYDTSYAEEAGIKSATFIVKDPYMYGTLS 190 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ IE+ E++ R+D YR+SG GGQ Sbjct: 191 VEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETVDSIEVPENEVRVDVYRSSGPGGQS 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL E + Q+ + S Sbjct: 251 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMKVLQAKLLERKRQEERAAMDAL-GS 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG Q+RSYVL PYQMVKDLRT E +PS VLDGD+D F++A + + Sbjct: 310 GGNASWGNQMRSYVLHPYQMVKDLRTEHEVNNPSAVLDGDIDGFIEAGIRWR 361 >gi|297183299|gb|ADI19436.1| protein chain release factor b [uncultured bacterium HF0500_16O16] Length = 361 Score = 262 bits (668), Expect = 8e-68, Method: Composition-based stats. Identities = 164/346 (47%), Positives = 227/346 (65%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG+FD + + L+ L+ + W + A+ + +E + L + +E++ RL D Sbjct: 14 FGGIFDIETRQKTLASLDEEMASNEFWNDRQRAEQVTKEARTLRDLTQPWQELKGRLDDL 73 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LLEL+ +EDD L++ L + + +F S+LS E D DA L +H+GAGGTE Sbjct: 74 AELLELSADEDDADTLKDLQIELSDVDETLGELEFFSMLSDEDDPKDALLVIHSGAGGTE 133 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + DWA ML+RMY RW E+R F +E +++ G+EAGIK AT+ +KG AYG+LK E GVHR Sbjct: 134 AADWAEMLMRMYGRWIERRGFTSEIMDLQPGDEAGIKGATIEVKGSYAYGYLKAEAGVHR 193 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+D+N RRHTSF+S++VYP VD ++E+ + D +IDTY+A GAGGQHVN T SA Sbjct: 194 LVRISPFDANKRRHTSFASVFVYPDVDSIPDVELRDEDLQIDTYKAGGAGGQHVNKTSSA 253 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV CQ ERSQ KNK A +L A+LY+ Q+ + ES+K I +G Sbjct: 254 VRITHLPTGIVVNCQNERSQLKNKGTAMKVLTARLYDHYKQEEMKKMEAVESTKKAIDFG 313 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 QIRSYV QPY +VKD RT E + ++DGDLD F+ A L+ + Sbjct: 314 SQIRSYVFQPYTLVKDHRTGHESGNVQAIMDGDLDGFINAFLSAAQ 359 >gi|284023776|ref|ZP_06378174.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus 132] Length = 331 Score = 262 bits (668), Expect = 8e-68, Method: Composition-based stats. Identities = 159/326 (48%), Positives = 215/326 (65%), Gaps = 1/326 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +P+ W N +A+ ++ + L ++ K +Q + D +L EE D + ++ Sbjct: 1 MMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + K +V+ + + LL G D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ Sbjct: 61 EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKK 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180 Query: 209 IWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH P+G+VV Q ER Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNER 240 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KN+ A ML++KLY+L+L+++ + EIGWG QIRSYV PY MVKD R Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAI 353 TN E V+DGD+ F+++ L Sbjct: 301 TNEETGKVDAVMDGDIRPFIESYLRQ 326 >gi|157964348|ref|YP_001499172.1| peptide chain release factor 2 [Rickettsia massiliae MTU5] gi|157844124|gb|ABV84625.1| Peptide chain release factor RF-2 [Rickettsia massiliae MTU5] Length = 337 Score = 262 bits (668), Expect = 8e-68, Method: Composition-based stats. Identities = 182/328 (55%), Positives = 238/328 (72%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L T +P LW + A+ L+RE+ +L+ ++ +++ L D L L E+A E+D L Sbjct: 4 LEELTANPSLWNDQANAQKLLREKSNLEEKLNAFNKLKSNLKDALELEEMAEAENDLETL 63 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 + +L+ + + + E L SGEAD N+ +LE++AGAGGTES DWA++++RMY R+A Sbjct: 64 SQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEINAGAGGTESHDWASIMMRMYLRFA 123 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+ FKTE + + +GEEAGIKS T+ I G AYGW K E GVHRLVRISP+++ +R TS Sbjct: 124 ERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTEAGVHRLVRISPFNAAGKRMTS 183 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S WVYP +DD+I I I + D RIDT+RASGAGGQHVNTTDSAVRITHIPTG V QCQ Sbjct: 184 FASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITHIPTGTVTQCQS 243 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +RSQHKNKAQA ML+AKLYELE+QKR + N ++KT+ WG QIRSYVLQPYQMVKD Sbjct: 244 DRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWGHQIRSYVLQPYQMVKD 303 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAI 353 LRT+ E + VLDGDL++F+ A LA+ Sbjct: 304 LRTDYETSDTKGVLDGDLEEFVSANLAM 331 >gi|329936498|ref|ZP_08286234.1| peptide chain release factor 2 [Streptomyces griseoaurantiacus M045] gi|329304013|gb|EGG47895.1| peptide chain release factor 2 [Streptomyces griseoaurantiacus M045] Length = 368 Score = 262 bits (668), Expect = 8e-68, Method: Composition-based stats. Identities = 158/353 (44%), Positives = 219/353 (62%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW N EA+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQAEVRKAEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD E L ++ ++ + +LLSGE DS +A + + Sbjct: 73 RGRIDDLGVLFEMAEEEDDPDTRAEAESELTAVRKALDEMEVRTLLSGEYDSREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+R +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAVQAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISPYD+ RR TSF+ + + PVV+ + +EI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPYDNQGRRQTSFAGVEILPVVEQTDHVEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ + + + Sbjct: 253 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT+ E +P V +G++D F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTDFEVGNPEAVFNGEIDGFLEAGIRWRK 364 >gi|290890028|ref|ZP_06553113.1| hypothetical protein AWRIB429_0503 [Oenococcus oeni AWRIB429] gi|290480375|gb|EFD89014.1| hypothetical protein AWRIB429_0503 [Oenococcus oeni AWRIB429] Length = 372 Score = 262 bits (668), Expect = 8e-68, Method: Composition-based stats. Identities = 162/353 (45%), Positives = 213/353 (60%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + Q++ D D ++ K P W + A+ ++ E L N + Sbjct: 13 MQEQIDGFRSTLDLDALDASIAENEDKMSQPGFWDDQQSAQKIIDETNTLKNRRDSFLSL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 Q + D + EL EEDD + E ++++ + ++E LL+ + DSN+A LE+H Sbjct: 73 QKSVEDLTAMAELLSEEDDADMHAELDTDIEKTEKDLEKYNLNQLLTEKYDSNNAILEIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 G GGTES DWA+ L RMYTRWA+ FK E + G+ AGI SATL I G NAYG+L+ Sbjct: 133 PGEGGTESTDWASNLYRMYTRWAQAHDFKVEVTDYQTGDVAGIDSATLRIIGHNAYGFLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241 E+GVHR VRISP+DS RRHTSF SI V P DD IEIEI D ++D YR+ GAGGQ Sbjct: 193 SEKGVHRFVRISPFDSAGRRHTSFVSIDVMPELDDDEIEIEIKPQDVKMDVYRSGGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN +AVR+THIPTG+VV Q ER+Q+ N+ A ML+AKLYE E QKREE Sbjct: 253 NVNKVSTAVRLTHIPTGIVVASQVERTQYGNRDIAMKMLKAKLYEREEQKREEEHAKLSG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +K ++ WG QIRSYV QPY+MVKDLR+ E V+DG+LD F+ A L K Sbjct: 313 TKLDVAWGSQIRSYVFQPYRMVKDLRSGYETGDTDGVMDGNLDPFINAYLKWK 365 >gi|116490620|ref|YP_810164.1| peptide chain release factor 2 [Oenococcus oeni PSU-1] gi|122277196|sp|Q04GC3|RF2_OENOB RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|116091345|gb|ABJ56499.1| bacterial peptide chain release factor 2 (bRF-2) [Oenococcus oeni PSU-1] Length = 372 Score = 262 bits (668), Expect = 8e-68, Method: Composition-based stats. Identities = 162/353 (45%), Positives = 213/353 (60%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + Q++ D D ++ K P W + A+ ++ E L N + Sbjct: 13 MQEQIDGFRSTLDLDALDASIAENEDKMSQPGFWDDQQSAQKIIDETNTLKNRRDSFLSL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 Q + D + EL EEDD + E ++++ + ++E LL+ + DSN+A LE+H Sbjct: 73 QKSVEDLTAMAELLSEEDDADMHAELDTDIEKTEKDLEKYNLNQLLTEKYDSNNAILEIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 G GGTES DWA+ L RMYTRWA+ FK E + G+ AGI SATL I G NAYG+L+ Sbjct: 133 PGEGGTESTDWASNLYRMYTRWAQAHDFKVEVTDYQTGDVAGIDSATLRIIGHNAYGFLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241 E+GVHR VRISP+DS RRHTSF SI V P DD IEIEI D ++D YR+ GAGGQ Sbjct: 193 SEKGVHRFVRISPFDSAGRRHTSFVSIDVMPELDDDEIEIEIKPQDVKMDVYRSGGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN +AVR+THIPTG+VV Q ER+Q+ N+ A ML+AKLYE E QKREE Sbjct: 253 NVNKVSTAVRLTHIPTGIVVASQVERTQYGNRDIAMKMLKAKLYEQEEQKREEEHAKLSG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +K ++ WG QIRSYV QPY+MVKDLR+ E V+DG+LD F+ A L K Sbjct: 313 TKLDVAWGSQIRSYVFQPYRMVKDLRSGYETGDTDGVMDGNLDPFINAYLKWK 365 >gi|294629650|ref|ZP_06708210.1| peptide chain release factor 2 [Streptomyces sp. e14] gi|292832983|gb|EFF91332.1| peptide chain release factor 2 [Streptomyces sp. e14] Length = 371 Score = 262 bits (668), Expect = 9e-68, Method: Composition-based stats. Identities = 156/353 (44%), Positives = 219/353 (62%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW N EA+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQAEVRKAEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD E L ++ ++ + +LLSGE D+ +A + + Sbjct: 73 RGRIDDLAVLFEMAEEEDDPDTRAEAESELTAVRKALDEMEVRTLLSGEYDAREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+R +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAVQAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + + PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ + + + Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT+ E +P V +G++D F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTDFEVGNPEAVFNGEIDGFLEAGIRWRK 364 >gi|302875854|ref|YP_003844487.1| peptide chain release factor 2 [Clostridium cellulovorans 743B] gi|302578711|gb|ADL52723.1| peptide chain release factor 2 [Clostridium cellulovorans 743B] Length = 369 Score = 262 bits (668), Expect = 9e-68, Method: Composition-based stats. Identities = 161/350 (46%), Positives = 228/350 (65%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LS+ + +G L D L L ++ W N+ A+ + + + + I Sbjct: 13 ELSKTIEEMGALLDIPKLTLTLEELEGSMQESGFWDNLERAQSVTARAKGIKDRIDLYNN 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 Q + D +L+E+A+EE+D S++ E + + + VE + E +LSGE D+N+A + + Sbjct: 73 FQSSVEDIKVLIEMAIEENDSSLVTEVYNEISTLSDSVENLRLELMLSGEYDTNNAIVTL 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H+G GGT++ DW MLLRMYTRW EK+ F E L++ G+EAGIKSATL + G AYG+L Sbjct: 133 HSGVGGTDAMDWTEMLLRMYTRWCEKKAFNVETLDLQVGDEAGIKSATLKVTGLYAYGYL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+G+HRLVRISP+++N +R TSF+S+ V P + +EI+ SD ++DTYRASGAGGQ Sbjct: 193 KAEKGIHRLVRISPFNANGKRQTSFASLEVTPELRQDQNVEINPSDLKVDTYRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SA+RITHIPTG+VVQCQ ERSQ +N+ A NML++KL EL+ + +E Sbjct: 253 HVNKTESAIRITHIPTGIVVQCQNERSQIQNRETALNMLKSKLVELKERAHKEKIEDLTG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++GWG QIRSYV PY MVKD RTNI+ V+DG+LD F+K L Sbjct: 313 DLKDMGWGSQIRSYVFHPYTMVKDHRTNIQVNDVYKVMDGELDVFIKGYL 362 >gi|291287317|ref|YP_003504133.1| peptide chain release factor 2 [Denitrovibrio acetiphilus DSM 12809] gi|290884477|gb|ADD68177.1| peptide chain release factor 2 [Denitrovibrio acetiphilus DSM 12809] Length = 371 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 175/350 (50%), Positives = 244/350 (69%), Gaps = 3/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTK-TEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 L + +N + D + +S ++ DP+ W N E+K+LM+E+ + E Sbjct: 13 LKKDINSFRTAMNEDELKKAISEVDNLSMSDPNFW-NSKESKVLMKEQAINKKKLEEWHE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L D +L+EL E + + + +++ ++ + + + + +LSG+ D N+A + + Sbjct: 72 LTGLLEDTEVLIELYKEGEQ-GVEADIETSIRTLEKTIAHFELKLVLSGQNDGNNAIITI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTE+ DWA ML RMYT +AE+ +K + L+ +GEEAGIK+AT+ IKG YG+L Sbjct: 131 NSGAGGTEANDWAAMLYRMYTHYAERNGYKCDILDYMEGEEAGIKNATINIKGAFTYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE GVHRLVRISPYDS +RRHTSF++++V P ++D IEI+ISE+D IDTYRASGAGGQ Sbjct: 191 KGETGVHRLVRISPYDSANRRHTSFAAVFVMPEIEDDIEIDISEADLHIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITH+PTG VV CQ ERSQHKNKA A +L+++LYELE+ K+ E ES Sbjct: 251 HVNTTDSAVRITHVPTGTVVTCQSERSQHKNKAHAMKILKSRLYELEIDKKNEEKQKLES 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +KTEIGWG QIRSYV+ PY+MVKDLRT E + V+DG+LD F++A L Sbjct: 311 TKTEIGWGNQIRSYVMHPYKMVKDLRTRHETGNVDAVMDGNLDAFIRAYL 360 >gi|294340483|emb|CAZ88864.1| Peptide chain release factor 2 (RF-2) [Thiomonas sp. 3As] Length = 331 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 165/328 (50%), Positives = 235/328 (71%), Gaps = 1/328 (0%) Query: 25 FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84 + EDP +W + A+ L RER+ L+ + ++ + L D+ L E++ EE D + Sbjct: 2 EVAGALEDPQVWNDPKRAQELGRERKSLETVVLGLESLTTALADHSELFEMSREEGDDAT 61 Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 + ++++ EVE +F + S D ++ ++++ AGAGGTE+ DWA+MLLR Y R+ Sbjct: 62 CEAIEADVEKSADEVEALEFRRMFSNPLDPSNCFIDIQAGAGGTEACDWASMLLRQYLRY 121 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 E++ FKTE +E +G+ AGI+SAT+ ++G AYG L+ E GVHRLVR SP+DS+ RHT Sbjct: 122 CERKGFKTEVMEETEGDVAGIRSATIKVEGDYAYGQLRTETGVHRLVRKSPFDSSGGRHT 181 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 SF+S++VYP VDDSIEI+I+ +D R DT+RASGAGGQH+N TDSAVR+THIPTG+VVQCQ Sbjct: 182 SFASVFVYPEVDDSIEIDINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIVVQCQ 241 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 +RSQHKN+A+AW MLR++LYE E++KR ES+K+++GWG QIRSYVL +K Sbjct: 242 NDRSQHKNRAEAWQMLRSRLYEHEMRKRMAEQQTLESTKSDVGWGHQIRSYVLD-QSRIK 300 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLA 352 DLRTN+E ++ VLDGDLD+F+ A+L Sbjct: 301 DLRTNVEISNTQKVLDGDLDEFITASLK 328 >gi|302551795|ref|ZP_07304137.1| peptide chain release factor 2 [Streptomyces viridochromogenes DSM 40736] gi|302469413|gb|EFL32506.1| peptide chain release factor 2 [Streptomyces viridochromogenes DSM 40736] Length = 368 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 159/353 (45%), Positives = 218/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW N EA+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQAEVRKAEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD E L ++ ++ + +LLSGE DS +A + + Sbjct: 73 RGRIDDLAVLFEMAEEEDDPDTRAEAESELAAVRKALDEMEVRTLLSGEYDSREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+R +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQRGYKTEIYETSYAEEAGIKSTTFAVQAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ + + + Sbjct: 253 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWRK 364 >gi|118586958|ref|ZP_01544390.1| peptide chain release factor 2 [Oenococcus oeni ATCC BAA-1163] gi|118432580|gb|EAV39314.1| peptide chain release factor 2 [Oenococcus oeni ATCC BAA-1163] Length = 378 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 162/353 (45%), Positives = 213/353 (60%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + Q++ D D ++ K P W + A+ ++ E L N + Sbjct: 19 MQEQIDGFRSTLDLDALDASIAENEDKMSQPGFWDDQQSAQKIIDETNTLKNRRDSFLSL 78 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 Q + D + EL EEDD + E ++++ + ++E LL+ + DSN+A LE+H Sbjct: 79 QKSVEDLTAMAELLSEEDDADMHAELDTDIEKTEKDLEKYNLNQLLTEKYDSNNAILEIH 138 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 G GGTES DWA+ L RMYTRWA+ FK E + G+ AGI SATL I G NAYG+L+ Sbjct: 139 PGEGGTESTDWASNLYRMYTRWAQAHDFKVEVTDYQTGDVAGIDSATLRIIGHNAYGFLR 198 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241 E+GVHR VRISP+DS RRHTSF SI V P DD IEIEI D ++D YR+ GAGGQ Sbjct: 199 SEKGVHRFVRISPFDSAGRRHTSFVSIDVMPELDDDEIEIEIKPQDVKMDVYRSGGAGGQ 258 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN +AVR+THIPTG+VV Q ER+Q+ N+ A ML+AKLYE E QKREE Sbjct: 259 NVNKVSTAVRLTHIPTGLVVASQVERTQYGNRDIAMKMLKAKLYEREEQKREEEHAKLSG 318 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +K ++ WG QIRSYV QPY+MVKDLR+ E V+DG+LD F+ A L K Sbjct: 319 TKLDVAWGSQIRSYVFQPYRMVKDLRSGYETGDTDGVMDGNLDPFINAYLKWK 371 >gi|289523219|ref|ZP_06440073.1| peptide chain release factor 2 [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503762|gb|EFD24926.1| peptide chain release factor 2 [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 355 Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats. Identities = 167/345 (48%), Positives = 229/345 (66%), Gaps = 1/345 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 G +FD D + L KT P W + A+ + ++ HL + + ++++ + Sbjct: 4 GKVFDVDTLESEIKALIDKTSSPDFWNSSD-AQKVTQKLSHLQDLLGQWQKMKAEWEELE 62 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +L EL E +D ++ E D R++ E+ + E LL E D ++A L VHAGAGG ++ Sbjct: 63 VLTELLNETEDEELIGEFYDKASRLRKEINSMEMELLLDEEYDESNAILTVHAGAGGLDA 122 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMY RWAE+ ++T+ ++I EEAGIK AT+LIKG +YG+LK E+G+HRL Sbjct: 123 QDWAEMLLRMYLRWAERHNYETKVIDILPDEEAGIKYATILIKGICSYGYLKAEKGIHRL 182 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+DS+ RRHTSF+SI V P + D +IEI + R++T+RASGAGGQ+VN TDSAV Sbjct: 183 VRISPFDSSKRRHTSFASIEVIPELPDDADIEIRPEEIRMETFRASGAGGQYVNMTDSAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+ HIPTG+VV CQ ERSQH N+ A +L+AKLYE Q+++++ + K EIGWG Sbjct: 243 RLIHIPTGIVVTCQNERSQHMNRQVAMQLLKAKLYERRQQEKQKMLDDLHGEKKEIGWGS 302 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 QIRSYVL PY MVKD RT S VLDGD+DDF+ A L ++K Sbjct: 303 QIRSYVLHPYTMVKDHRTGYTSYSVDAVLDGDIDDFVIAYLRMRK 347 >gi|163942871|ref|YP_001647755.1| peptide chain release factor 2 [Bacillus weihenstephanensis KBAB4] gi|229014346|ref|ZP_04171465.1| Peptide chain release factor 2 [Bacillus mycoides DSM 2048] gi|229063835|ref|ZP_04200139.1| Peptide chain release factor 2 [Bacillus cereus AH603] gi|229135993|ref|ZP_04264753.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST196] gi|229169892|ref|ZP_04297588.1| Peptide chain release factor 2 [Bacillus cereus AH621] gi|163865068|gb|ABY46127.1| peptide chain release factor 2 [Bacillus weihenstephanensis KBAB4] gi|228613606|gb|EEK70735.1| Peptide chain release factor 2 [Bacillus cereus AH621] gi|228647451|gb|EEL03526.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST196] gi|228716472|gb|EEL68176.1| Peptide chain release factor 2 [Bacillus cereus AH603] gi|228746946|gb|EEL96830.1| Peptide chain release factor 2 [Bacillus mycoides DSM 2048] Length = 326 Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 162/325 (49%), Positives = 217/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 W + A+ ++ E L + + +++ + + + +L EE D + +E Sbjct: 1 MMGAGFWDDQQGAQAVINEANALKDMVGRFRQLDETFENLEMTHDLLKEEYDEDLHEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR+ Sbjct: 61 SEVKTLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRR 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D +EIE+ D +IDTYRASGAGGQHVNTTDSAVRITH+PT VV CQ ERSQ Sbjct: 181 EVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHLPTNTVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ A ML+AKLY+ +L++++ + + EIGWG QIRSYV PY +VKD RTN Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG+++ F+ A L + Sbjct: 301 TEVGNVQAVMDGEINPFIDAYLRSR 325 >gi|15836107|ref|NP_300631.1| peptide chain release factor 2 [Chlamydophila pneumoniae J138] gi|8978947|dbj|BAA98782.1| peptide chain release factor 2 [Chlamydophila pneumoniae J138] Length = 350 Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 161/344 (46%), Positives = 224/344 (65%), Gaps = 1/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 + GLFD D + L L ++ + + WQ+ + A + + L I +E++ ++ Sbjct: 1 MRGLFDLDKKQKELQVLEEESSEENFWQDSVHAGKISEQIVSLRRQIQEYQELKSKIDAI 60 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LE A +D +I ++ + ++ + + LLSGEAD N +L ++AGAGGTE Sbjct: 61 EFFLEDADALEDPAICEDLEKEFLFCEKKLAVWETQRLLSGEADKNSCFLTINAGAGGTE 120 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 S DW ML RMY+RWA K ++ E ++ DGE GIK T+ G AYG+ K E+GVHR Sbjct: 121 SCDWVEMLFRMYSRWATKHQWALEVVDRLDGEVVGIKHVTVKFSGMYAYGYAKAERGVHR 180 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+DSN +RHTSF+S+ V+P +DD I+IEI +D RIDT+R+SGAGGQHVN T+SA Sbjct: 181 LVRISPFDSNGKRHTSFASVDVFPEIDDQIKIEIRPNDLRIDTFRSSGAGGQHVNVTESA 240 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+P+GVVV CQ ERSQ +N+ ML+AKLY+ LQ+R E ++ K EI WG Sbjct: 241 VRITHLPSGVVVSCQNERSQIQNRESCMKMLQAKLYQQVLQERLEKQSLDRKDKKEIAWG 300 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 QIR+YV QPY +VKD+RT E + +LDG+ LD+F+KA LA Sbjct: 301 SQIRNYVFQPYTLVKDVRTGHETGNVQAMLDGELLDEFIKAYLA 344 >gi|332971716|gb|EGK10664.1| peptide chain release factor RF2 [Desmospora sp. 8437] Length = 331 Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 169/325 (52%), Positives = 228/325 (70%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ ++ E HL + +KE+++ + ++ EL EEDD S+L E Sbjct: 1 MTDPAFWNDQGKAQKVIDENNHLKGIVQGVKELEEAHEELQVIAELIAEEDDESMLPEAE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L+ +K +++ + LLS D N A LE+H GAGGTESQDWA +LLRMYTRWAE R Sbjct: 61 EGLKDLKRKLDEFELSLLLSDPYDKNSAILELHPGAGGTESQDWAQILLRMYTRWAEHRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K E L+ GEEAG+KS TLLIKG NAYG+L+ E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 YKVETLDFLPGEEAGVKSVTLLIKGHNAYGYLRAEKGVHRLVRISPFDSSGRRHTSFVSA 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P ++D EIEI D +IDTYR+SGAGGQHVNTTDSAVRITH+PT +VV CQ ERSQ Sbjct: 181 NVMPEIEDDDEIEIRSEDIKIDTYRSSGAGGQHVNTTDSAVRITHLPTNIVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A +L+A+L E +++++++ + +TEIGWG QIRSYV PY MVKD RT Sbjct: 241 IKNRDRAMKILKARLVERQMEEKQKEIAELKGEQTEIGWGNQIRSYVFHPYSMVKDHRTQ 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DG++D F++A L + Sbjct: 301 VEVGNVQSVVDGEIDTFIEAYLRQQ 325 >gi|114776305|ref|ZP_01451350.1| peptide chain release factor 2 [Mariprofundus ferrooxydans PV-1] gi|114553135|gb|EAU55533.1| peptide chain release factor 2 [Mariprofundus ferrooxydans PV-1] Length = 372 Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 182/342 (53%), Positives = 233/342 (68%), Gaps = 1/342 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG FD D + L LN + EDP LW EA+ LM+E+ ++ + + L D L Sbjct: 23 GGHFDVDAREEELRELNARIEDPTLWDRPEEAQKLMQEKTRIERTLQTFHNSTEALDDAL 82 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L E+ EE D E + L ++ E+E + +L GE D+ A+L+++AG+GGTE+ Sbjct: 83 TLFEMGAEESDPDTQMEAVETLDSVQAELEALELARMLGGETDAESAFLDINAGSGGTEA 142 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMY RWAE++ FKTE +E GEEAGIKSAT+ IKG AYG+LK E GVHRL Sbjct: 143 QDWAEMLLRMYLRWAERKGFKTELMECTAGEEAGIKSATVSIKGEYAYGFLKAEVGVHRL 202 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SPYDS +RRHTSF+S++ YP ++ IEI+I SD R DTYRASGAGGQH+N TDSAV Sbjct: 203 VRKSPYDSGNRRHTSFASVFAYPDIEKDIEIDIDPSDVRTDTYRASGAGGQHINKTDSAV 262 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+TH+PT +VVQCQ +RSQHKN+A AW+ML+A+LYE EL R E KT+IGWG Sbjct: 263 RLTHVPTNIVVQCQNDRSQHKNRAAAWSMLKARLYEHELNLRNAEKQEIEDGKTDIGWGH 322 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRT +E + LDGD+D F++A L Sbjct: 323 QIRSYVLD-QSRIKDLRTGMETGNTQAFLDGDIDAFIQAELM 363 >gi|294812911|ref|ZP_06771554.1| Peptide chain release factor 2 [Streptomyces clavuligerus ATCC 27064] gi|326441313|ref|ZP_08216047.1| peptide chain release factor 2 [Streptomyces clavuligerus ATCC 27064] gi|294325510|gb|EFG07153.1| Peptide chain release factor 2 [Streptomyces clavuligerus ATCC 27064] Length = 368 Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 161/355 (45%), Positives = 220/355 (61%), Gaps = 5/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + HL + + + Sbjct: 13 LSSTMGSIESVLDLDRMRADIAVLEEQAAAPSLWDDPEAAQKITSRLSHLQAELRKTEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA EDD L E L ++ ++ + +LLSGE D +A + + Sbjct: 73 RARIDDLGVLFELAEAEDDADTLAEAETELAAVRKALDEMEVRTLLSGEYDEREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ + TE E EEAGIKS T ++K P AYG L Sbjct: 133 AEAGGVDASDFAERLQRMYMRWAERHGYATEIYETSYAEEAGIKSTTFVVKAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ S +EI E++ R+D YRASG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQSDHVEIDETELRVDVYRASGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV CQ ERSQ +NKA A N+L+AKL E ++R+E ++ Sbjct: 253 VNTTDSAVRITHIPTGIVVSCQNERSQIQNKASAMNVLQAKLLE---RRRQEEQARMDAL 309 Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K + G WG Q+RSYVL PYQMVKDLRT E +P VLDG++D F++A + ++ Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLEAAIRWRR 364 >gi|298528152|ref|ZP_07015556.1| hypothetical protein Dthio_PD3135 [Desulfonatronospira thiodismutans ASO3-1] gi|298511804|gb|EFI35706.1| hypothetical protein Dthio_PD3135 [Desulfonatronospira thiodismutans ASO3-1] Length = 368 Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 153/350 (43%), Positives = 226/350 (64%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 ++ + G D ++ QRL + + P W + + +++E+ L+ ++S +++ Sbjct: 17 QRFSSFWGRLDLESQKQRLEEIEHELSRPGAWDSPEKLTPILKEKSGLEESVSKYEQLHS 76 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 + LE A + +LQ D+L+ + ++E + E+LLSG+ D+N A + +H G Sbjct: 77 LQEEVREWLEFADNDQSGEVLQALEDSLETLSRQLEKVELEALLSGKDDNNPAIVSIHPG 136 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGGTE+QDW MLLRMYTRWAE + FK + L+ G+EAG+KS TL + G AYG LK E Sbjct: 137 AGGTEAQDWVEMLLRMYTRWAESKGFKLDYLDYLPGDEAGVKSVTLQVTGEYAYGLLKSE 196 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 +G+HRL+RISP+D++ RRHTSF+S+ VYP V D I IE+ E D R+D ++ASG GGQHVN Sbjct: 197 RGIHRLIRISPFDASGRRHTSFASVDVYPQVSDDINIEVKEEDMRVDVFKASGPGGQHVN 256 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T SA+RITH+PTG+VVQCQ ERSQ +N+ A +L+AKLY+ E++K E+ ++K Sbjct: 257 KTSSAIRITHMPTGIVVQCQSERSQRRNRDAALKILKAKLYDEEMKKLEDERQEKYAAKD 316 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 I WG QIR+Y L Y++VKD R N E VLDG++D ++ L + Sbjct: 317 SIAWGSQIRTYTLHSYRLVKDHRNNTEIYDVDSVLDGNIDTLIRNYLLYR 366 >gi|295092740|emb|CBK78847.1| bacterial peptide chain release factor 2 (bRF-2) [Clostridium cf. saccharolyticum K10] Length = 333 Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 153/324 (47%), Positives = 220/324 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E+P W + + LMRE ++L + + ++++ D ++LE+ EE+D S++ E Sbjct: 1 MEEPGFWDDPETSTKLMREAKNLKDTVENYRKLEQEYEDIQVMLEMGYEENDPSLIPEIQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + ++E + ++LLSGE D+N+A L+++AGAGGTE+ DW +ML RMY RW++K+ Sbjct: 61 GMMDDFVAKLEAIRIQTLLSGEYDNNNAILKLNAGAGGTEACDWCSMLYRMYQRWSDKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F T ++ DGEEAGIKS TL I G NAYG+LK E+GVHRLVRISP++S +R TSF S Sbjct: 121 FTTSVIDYLDGEEAGIKSITLQINGENAYGFLKSERGVHRLVRISPFNSAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + + +++EI+ + RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQ Sbjct: 181 DVMPDIKEDLDVEINPDELRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK A ML+ KLY ++ ++ E + +I +G QIRSYV+QPY +VKD RT Sbjct: 241 FQNKEVAMQMLKTKLYMMKQEEHAEKLSDIRGDVKDINFGNQIRSYVMQPYTLVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + + VLDGD+D F+ A L Sbjct: 301 AESGNVNAVLDGDIDLFISAYLKW 324 >gi|238063024|ref|ZP_04607733.1| peptide chain release factor 2 [Micromonospora sp. ATCC 39149] gi|237884835|gb|EEP73663.1| peptide chain release factor 2 [Micromonospora sp. ATCC 39149] Length = 373 Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 160/356 (44%), Positives = 223/356 (62%), Gaps = 5/356 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D D + + L + P LW + +A+ + + +++ I + Sbjct: 12 ELDAILRNIEAVLDLDRLHEDKARLEEQASAPDLWDDQAKAQQVTSQLSYVNGEIDKLGS 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D +LLELA EDD +L E + + ++ + +LLSGE DS +A + + Sbjct: 72 LRSRLDDARVLLELAEAEDDPGVLAEVETEIGALTKSIQDMEVRTLLSGEYDSREALVAI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG ++ D+A MLLRMY RWAE+ + TE E EEAG+KSAT +K P AYG L Sbjct: 132 RAGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFAVKVPYAYGTL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+ + V PV + + I+I E++ R+D YR+SG GGQ Sbjct: 192 SVESGTHRLVRISPFDNQGRRQTSFAGVEVLPVTEQTDHIDIPENEVRVDVYRSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+A+L E +KR+E Sbjct: 252 SVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASALRVLQARLLE---RKRQEEQAKLNG 308 Query: 302 SKTEI--GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 KT+ WG Q+RSYVL PYQMVKDLRT E +PS V DG+LD F++A + +K Sbjct: 309 LKTDAAGSWGDQMRSYVLHPYQMVKDLRTEQETGNPSAVFDGELDSFIEAGIRWRK 364 >gi|291439311|ref|ZP_06578701.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672] gi|291342206|gb|EFE69162.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672] Length = 368 Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 157/353 (44%), Positives = 216/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW N EA+ + HL + + + Sbjct: 13 LSSTMESIEAVLDLDRMRADIAVLEEQAAAPSLWDNPDEAQKITSRLSHLQAEVRKAEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD E L ++ ++ + +LLSGE D+ +A + + Sbjct: 73 RGRIDDLAVLFEMAEEEDDPDTRAEAEAELADVRKALDEMEVRTLLSGEYDAREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ S ++I ESD R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQSDHVDIDESDLRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV CQ ERSQ +N+A A N+L+AKL E Q+ + + + Sbjct: 253 VNTTDSAVRITHIPTGIVVSCQNERSQIQNRATAMNVLQAKLLERRRQEEQAKMDALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWRK 364 >gi|256545449|ref|ZP_05472811.1| peptide chain release factor 2, programmed [Anaerococcus vaginalis ATCC 51170] gi|256398845|gb|EEU12460.1| peptide chain release factor 2, programmed [Anaerococcus vaginalis ATCC 51170] Length = 369 Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 155/354 (43%), Positives = 224/354 (63%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + L+ +G + + + + +T + + W + +A+ +M + + Sbjct: 13 ELDKNLDMIGSHLNPEKLNTEIKEIEKQTLEENFWDDSQKAQEIMADLSDKKDNFKTFTS 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLE 120 ++ L D LL++ E ++ + + K E+ + ++ L GE D N+AYL Sbjct: 73 FKEELKDQSDLLDIIEESNEDLESLNEIEEILNSLKKEIGSFKIKTELDGEYDKNNAYLV 132 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +HAGAGG E+ DWA ML+RMYTR+ EKR FK + ++++ E GIKSAT+ +KG AYG+ Sbjct: 133 IHAGAGGLEATDWAEMLMRMYTRFFEKRNFKFDVTDLNNEEAGGIKSATIHVKGSFAYGY 192 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LKGE+GVHRLVRISP+DS+ RRHTSF+S+ ++P ++D + +EI D RIDTYRASGAGG Sbjct: 193 LKGEKGVHRLVRISPFDSSKRRHTSFASVDIFPELNDDMSVEIDPKDLRIDTYRASGAGG 252 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVN TDSAVRITHIPTGV+ Q ERSQ +NK A +L AKL +++ ++ E + Sbjct: 253 QHVNKTDSAVRITHIPTGVIASSQAERSQTQNKETAMKLLLAKLTQIKEEEHREKIEDIQ 312 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + T+I WG QIRSYV PY +VKD RTN E + V+DGD+D F+ LA K Sbjct: 313 GNYTQIAWGNQIRSYVFHPYTLVKDHRTNFEVGNVESVMDGDIDGFIDEYLANK 366 >gi|332638053|ref|ZP_08416916.1| peptide chain release factor 2 [Weissella cibaria KACC 11862] Length = 332 Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats. Identities = 159/325 (48%), Positives = 212/325 (65%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + + A+ ++ L + + + LEL E D + E Sbjct: 1 MAQPDFWNDNVAAQKVIDANNILKGRRDDYLNLTAGVENVETALELLAEMPDEDMQAEME 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +L+++ ++E + LL+ D N+A LE+H G+GGTES DW L RMYTRWAE+ Sbjct: 61 ADLEKLAADLESYRLAQLLNEPYDKNNAILEIHPGSGGTESADWGANLQRMYTRWAERHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ H G+ AGI SATL+I G NAYG+L+ E+GVHR VRISP+DS RRHTSF SI Sbjct: 121 FKVEIMDYHPGDVAGIDSATLMITGHNAYGYLRSERGVHRFVRISPFDSAGRRHTSFVSI 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DDS++++I+ +D ++D YRASGAGGQH+N T SAVR+THIPTG+VV QQ+RSQ Sbjct: 181 DVMPELDDSVDVDINPADVKMDVYRASGAGGQHINKTSSAVRLTHIPTGIVVASQQQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK A+ MLRAKLY+LE+ K+E+ + E GWG QIRSYV QPY+MVKD RTN Sbjct: 241 FQNKDTAYAMLRAKLYQLEMDKKEKERASIAGEQLENGWGSQIRSYVFQPYRMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E +P V+DGDLD F+ A L K Sbjct: 301 YESGNPQGVMDGDLDPFINAYLRWK 325 >gi|307702035|ref|ZP_07639043.1| peptide chain release factor 2 [Streptococcus mitis NCTC 12261] gi|307616680|gb|EFN95869.1| peptide chain release factor 2 [Streptococcus mitis NCTC 12261] Length = 329 Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats. Identities = 154/328 (46%), Positives = 210/328 (64%), Gaps = 2/328 (0%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 K +P W + I A+ +E L N + ++++ + ILL+ +D S+ + Sbjct: 2 ENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDF--LAEDESVHE 59 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E + L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 60 ELVEQLSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGN 119 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF Sbjct: 120 AKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSF 179 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG VVQ + Sbjct: 180 TSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVD 239 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 R+Q+ N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD Sbjct: 240 RTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDH 299 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RTN E V+DGDLD F+ A L + Sbjct: 300 RTNFEVAQVDKVMDGDLDGFIDAYLKWR 327 >gi|291542843|emb|CBL15953.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus bromii L2-63] Length = 372 Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats. Identities = 161/350 (46%), Positives = 224/350 (64%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +++ L + + L K +P W +V +++ +++ L + + + Sbjct: 14 LKPEIDDLSDALGMKGMLSEIQQLELKATEPGFWDDVEKSQKVLQRTGSLKGKVEAYEGL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L+ELA EE+D S+L+E ++ +K +E ++ ++LL+GE D N+A L H Sbjct: 74 VAKYEDTHALIELANEEEDESLLEEAESEVEAVKENLEKQRLQTLLTGEYDKNNAILTFH 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG+GGTE+QDWA ML RMYTRWAE FK + ++ DG+EAG+KSA LL++G NAYG+LK Sbjct: 134 AGSGGTEAQDWAEMLYRMYTRWAEAHGFKVKEVDYLDGDEAGLKSAVLLVEGENAYGYLK 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR+SP+DS RRHTSFSS+ V P + E+ I D ++D YRASGAGGQ Sbjct: 194 SEAGVHRLVRVSPFDSAGRRHTSFSSLEVMPEIAKDTEVHIPPEDIKMDVYRASGAGGQK 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T SAVR+THIPTG+VV Q ERSQ++N+ A NML +KL E++ ++ E + Sbjct: 254 VNKTSSAVRLTHIPTGIVVASQVERSQYQNRDVAMNMLISKLVEIKEREHLEKIEDIKGV 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + EI WG QIRSYV PY MVKD RT E + V+DGDLD F+ A L Sbjct: 314 QKEITWGSQIRSYVFMPYTMVKDHRTGFETGNIQAVMDGDLDGFINAYLK 363 >gi|306825598|ref|ZP_07458937.1| peptide chain release factor RF2 [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431959|gb|EFM34936.1| peptide chain release factor RF2 [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 329 Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats. Identities = 153/328 (46%), Positives = 211/328 (64%), Gaps = 2/328 (0%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 K +P W + I A+ +E L N + +++++ + ILL+ +D S+ Sbjct: 2 ENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDF--LAEDESVHD 59 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E + L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 60 ELVEQLTELDKMMANYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGN 119 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF Sbjct: 120 AKGFKVEVLDYQAGDEAGIKSVTLFFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSF 179 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG VVQ + Sbjct: 180 TSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVD 239 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 R+Q+ N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD Sbjct: 240 RTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDH 299 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RT+ E + V+DGDLD F+ A L + Sbjct: 300 RTSFEVSQVDKVMDGDLDGFIDAYLKWR 327 >gi|167039139|ref|YP_001662124.1| peptide chain release factor 2 [Thermoanaerobacter sp. X514] gi|166853379|gb|ABY91788.1| peptide chain release factor 2 [Thermoanaerobacter sp. X514] Length = 330 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 162/325 (49%), Positives = 221/325 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W ++ +++ L ++++ L + + + D L+EL LEE D SI E Sbjct: 1 MSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLSTLIELGLEEGDESITDEVD 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +K ++E + ++LL+G D N+A L +HAG+GGTE+QDWA MLLRMYTRWA + Sbjct: 61 KEYKELKKKLEDLKIKTLLNGLYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ E L+ GEEAGIKS TL+IKGP AYG+LK E GVHRLVRISP+D+ RRHTSF+ + Sbjct: 121 FEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ IE+EI D +IDTYRASGAGGQ+VN T+SAVRITH+PTG+VV CQ ERSQ Sbjct: 181 EVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A ML+AKL +L +++++E + E WG QIRSYV QPY +VKD RTN Sbjct: 241 IQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG++D F+ A L K Sbjct: 301 YEVGNVQAVMDGEIDGFINAYLKQK 325 >gi|15618982|ref|NP_224772.1| peptide chain release factor 2 [Chlamydophila pneumoniae CWL029] gi|7388054|sp|P56906|RF2_CHLPN RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 369 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 163/359 (45%), Positives = 227/359 (63%), Gaps = 9/359 (2%) Query: 3 LSRQLNCLG--------GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN 54 L ++L L LFD D + L L ++ + + WQ+ + A + + L Sbjct: 5 LDKRLEALRTEISLAARSLFDLDKKQKELQVLEEESSEENFWQDSVHAGKISEQIVSLRR 64 Query: 55 AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114 I +E++ ++ LE A +D +I ++ + ++ + + LLSGEAD Sbjct: 65 QIQEYQELKSKIDAIEFFLEDADALEDPAICEDLEKEFLFCEKKLAVWETQRLLSGEADK 124 Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 N +L ++AGAGGTES DW ML RMY+RWA K ++ E ++ DGE GIK T+ G Sbjct: 125 NSCFLTINAGAGGTESCDWVEMLFRMYSRWATKHQWALEVVDRLDGEVVGIKHVTVKFSG 184 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 AYG+ K E+GVHRLVRISP+DSN +RHTSF+S+ V+P +DD I+IEI +D RIDT+R Sbjct: 185 MYAYGYAKAERGVHRLVRISPFDSNGKRHTSFASVDVFPEIDDQIKIEIRPNDLRIDTFR 244 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 +SGAGGQHVN T+SAVRITH+P+GVVV CQ ERSQ +N+ ML+AKLY+ LQ+R E Sbjct: 245 SSGAGGQHVNVTESAVRITHLPSGVVVSCQNERSQIQNRESCMKMLQAKLYQQVLQERLE 304 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 ++ K EI WG QIR+YV QPY +VKD+RT E + +LDG+ LD+F+KA LA Sbjct: 305 KQSLDRKDKKEIAWGSQIRNYVFQPYTLVKDVRTGHETGNVQAMLDGELLDEFIKAYLA 363 >gi|288817909|ref|YP_003432256.1| peptide chain release factor RF-2 [Hydrogenobacter thermophilus TK-6] gi|288787308|dbj|BAI69055.1| peptide chain release factor RF-2 [Hydrogenobacter thermophilus TK-6] gi|308751508|gb|ADO44991.1| peptide chain release factor 2 [Hydrogenobacter thermophilus TK-6] Length = 369 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 173/341 (50%), Positives = 236/341 (69%), Gaps = 1/341 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D + + L ++ + W++ +AK + + R+ L+ I + I+ L L L Sbjct: 23 MDISSMKEELKKIDMSMSSTNFWEDQGKAKEITQRRKWLEETIKEFERIKSTLE-TLQEL 81 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 ++E+D L ++ +Q ++ + + ++ LS E D N+AYL V AGAGGTE+ DW Sbjct: 82 LEEVDEEDLETLSMIAEEIQSVEKPIRDLEIKTFLSEEMDKNNAYLTVQAGAGGTEACDW 141 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A+MLLRMY RWAEK ++ E ++I+ + AGIKSATLLIKGP AYG+LKGE GVHRLVRI Sbjct: 142 ASMLLRMYRRWAEKHGYEVEVIDINPDDVAGIKSATLLIKGPYAYGYLKGESGVHRLVRI 201 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+D+N+RRHTSF+S+ V P +D+ I IEI E D +++T+RASGAGGQ+VN TD+AVRI Sbjct: 202 SPFDANARRHTSFASVSVVPQIDEKINIEIREEDIQMETFRASGAGGQYVNKTDTAVRIR 261 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+ V CQQERSQ +N+ +A +L+AKLY+LELQK EE E KT+IGWG QIR Sbjct: 262 HIPTGITVSCQQERSQFQNRLKALELLKAKLYQLELQKLEEKKKALEGEKTDIGWGYQIR 321 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 SYV QPYQMVKDLRT +E + V+DGD+D F++ L K Sbjct: 322 SYVFQPYQMVKDLRTGLEVGNVDAVMDGDIDSFIEEYLRWK 362 >gi|268611479|ref|ZP_06145206.1| hypothetical protein RflaF_18501 [Ruminococcus flavefaciens FD-1] Length = 372 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 157/349 (44%), Positives = 235/349 (67%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 +++ L + + +NA +R++ L +T W ++ ++ +++E++ L+ I ++ Sbjct: 15 RKEMEELADVLNIENAKKRVAELGDETAKEGFWDDLENSQKVLKEQKSLERKIEKFNKLN 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 D L D + L+EL++E +D S ++E + K ++E ++ +LL+GE D +A L HA Sbjct: 75 DSLEDLITLIELSIEAEDESDIEEIKAEAESFKSKLEDEKLSTLLTGEYDGANAILTFHA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+QDWA ML RMY RWAE+ +FK E L+ DG+EAG+KSA++LI+G NAYG++K Sbjct: 135 GAGGTEAQDWAEMLYRMYNRWAERHEFKVELLDYLDGDEAGMKSASILIEGENAYGYMKS 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR+SP+D+ RRHTSF+++ V P +DDSIE++I D ++ YR+SGAGGQ V Sbjct: 195 ESGVHRLVRVSPFDAQGRRHTSFAALEVMPELDDSIEVDIRPEDIEMEVYRSSGAGGQKV 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SAVR+ H PTG+VV CQ +RSQ++NK A MLR+KL E++ ++ E + + Sbjct: 255 NKTSSAVRLIHKPTGIVVSCQTQRSQYQNKDYAMKMLRSKLIEIKEREHLEKIEDIKGVQ 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +I WG QIRSYV PY +VKD RT E + V+DGD+D F+ A L Sbjct: 315 NQIAWGSQIRSYVFMPYTLVKDTRTGFENGNIQAVMDGDIDGFINAYLK 363 >gi|21221417|ref|NP_627196.1| peptide chain release factor 2 [Streptomyces coelicolor A3(2)] gi|256787399|ref|ZP_05525830.1| peptide chain release factor 2 [Streptomyces lividans TK24] gi|289771299|ref|ZP_06530677.1| peptide chain release factor 2 [Streptomyces lividans TK24] gi|19864260|sp|Q53915|RF2_STRCO RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|6912002|emb|CAB72218.1| chain release factor 2 [Streptomyces coelicolor A3(2)] gi|289701498|gb|EFD68927.1| peptide chain release factor 2 [Streptomyces lividans TK24] Length = 368 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 154/353 (43%), Positives = 216/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLDRLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD E L ++ ++ + +LLSGE D+ +A + + Sbjct: 73 RGRIDDLGVLFEMAEEEDDPDTRAEAESELAAVRKALDEMEVRTLLSGEYDAREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTEVYETSYAEEAGIKSTTFAVQSPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + + PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ + + + Sbjct: 253 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRK 364 >gi|29831645|ref|NP_826279.1| peptide chain release factor 2 [Streptomyces avermitilis MA-4680] gi|81717933|sp|Q82D82|RF2_STRAW RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|29608761|dbj|BAC72814.1| putative peptide chain release factor 2 [Streptomyces avermitilis MA-4680] Length = 368 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 154/353 (43%), Positives = 217/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD E L +K ++ + +LLSGE DS +A + + Sbjct: 73 RGRIDDLSVLFEMAEEEDDPDTRAEAESELTAVKKALDEMEVRTLLSGEYDSREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+R +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQRGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + + PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVETTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL + Q+ + + + Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLDRRRQEEQAKMDALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G+++ F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPEAVFNGEIEGFLEAGIRWRK 364 >gi|317133128|ref|YP_004092442.1| peptide chain release factor 2 [Ethanoligenens harbinense YUAN-3] gi|315471107|gb|ADU27711.1| peptide chain release factor 2 [Ethanoligenens harbinense YUAN-3] Length = 377 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 161/351 (45%), Positives = 238/351 (67%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + +++ LG D A + L K W ++ ++ ++++ + L + I+ + + Sbjct: 17 MRPEIDDLGRALGLDAARAEVRELEEKAAQQDFWNDIENSQSVLQKTRQLKDKIASYEAL 76 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + D L L+ELA EE+D S+L E ++ + ++ +++ + +LL+GE D+ +A L H Sbjct: 77 RRKTDDTLALIELADEEEDLSVLAEAAEAVDSVRAQIDTMRLATLLTGEYDAKNAILTFH 136 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA ML RMYTRWAE+ F + L+ DGEEAG+KSA++LI+G NAYG+LK Sbjct: 137 AGAGGTEAQDWAEMLYRMYTRWAERHGFNVQVLDYLDGEEAGLKSASVLIEGLNAYGYLK 196 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR+SP+DS+ RRHTSF+S+ V P +DDSIE++I D ++D +R+SGAGGQH Sbjct: 197 SEIGVHRLVRVSPFDSSGRRHTSFASVEVMPEIDDSIEVDIRPEDIKMDVFRSSGAGGQH 256 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T SAVR+TH+PTG+VV CQ ERSQH+N+ A ML++KL E++ ++ + + Sbjct: 257 INKTSSAVRLTHLPTGIVVSCQNERSQHQNREMAMRMLKSKLVEIKEREHYDKIEDIKGV 316 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + EI WG QIRSYV PY +VKD RT+ E + V+DGDLD F+ A L Sbjct: 317 QKEIAWGSQIRSYVFMPYTLVKDHRTSFESGNIGAVMDGDLDGFINAYLKA 367 >gi|283769449|ref|ZP_06342347.1| peptide chain release factor 2 [Bulleidia extructa W1219] gi|283103974|gb|EFC05359.1| peptide chain release factor 2 [Bulleidia extructa W1219] Length = 346 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 140/341 (41%), Positives = 208/341 (60%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 FD D Q + N W + +A+ +++E L + + ++ + D L + Sbjct: 5 FDLDQKKQEIQKNNDLMAQEDFWNDQKKAQKIIKENNSLKDLVDQHTKLYETTLDLLASV 64 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 D + + + + + + LLSG D ++A LE+H GAGGTE+ DW Sbjct: 65 TELQSSLDEDMKELVEEEYVQYDQDYALFEVRVLLSGPYDDHNAILEIHPGAGGTEAMDW 124 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A ML RMYTR+AE++ + + L+ GEEAG+KS ++ + G AYG+LK E GVHRLVRI Sbjct: 125 AGMLYRMYTRFAERKGYHLDVLDYQPGEEAGVKSVSMRVSGNMAYGYLKAENGVHRLVRI 184 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DSN+RRHTSF+S+ + P +D +EIEI + D + T R+SGAGGQH+N TDSAVR+T Sbjct: 185 SPFDSNARRHTSFASVEIMPEFEDDLEIEIEDKDLDVITMRSSGAGGQHINKTDSAVRMT 244 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H PTG+ V Q +RSQ +N+ NML++KL +L+++++E+ A+ + WG QIR Sbjct: 245 HKPTGITVFSQSQRSQLQNRETCLNMLKSKLLQLKIREQEQRASEIKGEVKANEWGSQIR 304 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 SYV PY MVKDLRT E + V+DGD++ F+ + L + Sbjct: 305 SYVFAPYTMVKDLRTGYEVGNVQSVMDGDIEGFIDSYLRSQ 345 >gi|52425597|ref|YP_088734.1| peptide chain release factor 2 [Mannheimia succiniciproducens MBEL55E] gi|52307649|gb|AAU38149.1| PrfB protein [Mannheimia succiniciproducens MBEL55E] Length = 325 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 171/324 (52%), Positives = 229/324 (70%), Gaps = 1/324 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P +W +A+ L +ER L+ ++ IK++ L D LLELA+E +D E Sbjct: 1 MEQPDVWNEPEKAQALGKERSALETVVNTIKKLDQGLEDVDGLLELAVEGEDEETFNEAV 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L ++ ++ +F + SGE D+ D Y+++ AG+GGTE+QDW MLLRMY RWAE + Sbjct: 61 TELDELEQQLAKLEFRRMFSGEHDACDCYIDLQAGSGGTEAQDWTEMLLRMYLRWAESKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FKTE +E+ DG+ AG+KSAT+ + G A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ Sbjct: 121 FKTELMEVSDGDVAGLKSATVKVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAA 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 ++YP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIP+G+VVQCQ +RSQ Sbjct: 181 FIYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPSGIVVQCQNDRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 HKNK Q L+AKLYE+ELQK+ E SK++IGWG QIRSYVL +KDLRT Sbjct: 241 HKNKDQCMKQLKAKLYEMELQKKNADKQALEDSKSDIGWGSQIRSYVLDD-SRIKDLRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 +E + VLDGDLD F++A+L Sbjct: 300 VENRNTQAVLDGDLDRFIEASLKA 323 >gi|258405989|ref|YP_003198731.1| hypothetical protein Dret_1869 [Desulfohalobium retbaense DSM 5692] gi|257798216|gb|ACV69153.1| hypothetical protein Dret_1869 [Desulfohalobium retbaense DSM 5692] Length = 371 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 161/351 (45%), Positives = 223/351 (63%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 ++L + L D RL + + P WQN E ++RE+ L I + Sbjct: 12 LELQEKFESLWRRLDLQGHHDRLKTIEEELAKPEAWQNPEELTPILREKSRLTEEIESWE 71 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 ++D D LE+A E+ +LQ S+ + ++ + E LLS D +A LE Sbjct: 72 ALRDLHEDLQEWLEMADEDQGQEVLQALSETNANLAAQLNKVEMELLLSKPEDKGNAILE 131 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +H GAGGTE+QDWA MLLRMY RW E+R FK + L+ GEEAGIKS TL I+G AYG Sbjct: 132 IHPGAGGTEAQDWAEMLLRMYLRWCERRGFKVQELDSLPGEEAGIKSVTLQIQGTFAYGL 191 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ E+G+HRL+RISP+D++ RRHTSF+S+ VYP D IEI++++ D R+D +R+SG GG Sbjct: 192 LQAEKGIHRLIRISPFDTSGRRHTSFASVDVYPEAADDIEIDVNDEDIRVDVFRSSGPGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q+VN T SA+RITH P+G+VVQCQ E+SQ +NK A +L+++LY+ E +KRE Sbjct: 252 QNVNKTSSAIRITHFPSGIVVQCQNEKSQRRNKETAMKILKSRLYDQERKKREADKQAEY 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +SK I WG QIR+Y LQPY++VKD RTN E VLDGD+D F+++ L Sbjct: 312 ASKEAIAWGSQIRTYTLQPYRLVKDHRTNTEAGDVDKVLDGDIDVFLRSYL 362 >gi|254497462|ref|ZP_05110255.1| peptide chain release factor 2 [Legionella drancourtii LLAP12] gi|254353277|gb|EET12019.1| peptide chain release factor 2 [Legionella drancourtii LLAP12] Length = 335 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 171/330 (51%), Positives = 226/330 (68%), Gaps = 1/330 (0%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 + + E +W N A+ L RER L+N + + + + D L ELA EE+D Sbjct: 2 EEVVRELESSTVWNNPEVAQALGRERTQLENVVFTLSGLSQSIIDLTELFELAREENDEQ 61 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 + E L+ I+ +V +F + SG D +AYL++ +G+GGTE+QDWA MLLRMY R Sbjct: 62 AINEIGAELETIEQKVADLEFRRMFSGRMDGCNAYLDIQSGSGGTEAQDWAEMLLRMYLR 121 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 W E+ F TE +E G+ AGIKSAT+ +G A+GWL+ E GVHRLVR SP+DS +RRH Sbjct: 122 WGEQHGFTTELIECSPGDVAGIKSATIYFQGEYAFGWLRTETGVHRLVRKSPFDSGNRRH 181 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TSF+++++ P +DD IEIEI+ +D RIDTYRASGAGGQHVN TDSAVRITH P+G+VVQC Sbjct: 182 TSFAAVFISPEIDDDIEIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHAPSGIVVQC 241 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 Q +RSQH+NK QA LRAKLYELE+QK+ E+SK++IGWG QIRSYVL + Sbjct: 242 QNDRSQHRNKDQAMKQLRAKLYELEMQKKNAEQQALEASKSDIGWGSQIRSYVLD-QSRI 300 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KDLRT +E ++ VLDG LD F++A+L Sbjct: 301 KDLRTGVETSNTQAVLDGALDQFIEASLKA 330 >gi|332290838|ref|YP_004429447.1| hypothetical protein Krodi_0191 [Krokinobacter diaphorus 4H-3-7-5] gi|332168924|gb|AEE18179.1| hypothetical protein Krodi_0191 [Krokinobacter diaphorus 4H-3-7-5] Length = 368 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 158/351 (45%), Positives = 226/351 (64%), Gaps = 2/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +++ L D D + KT DP+ W + EA+ M+ + ++ +E Sbjct: 10 LQERVDGLRRYLDVDRKRIEIQNEEEKTFDPNFWNDPKEAEAFMKTLRSKKKWVTDYEEA 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 Q + D +L E A E + + + +E +F ++LS E D L++ Sbjct: 70 QTFVEDLEVLYEFAKEGEAPEENVQDRYDKAA--AFIEDIEFRNMLSEEGDELSCVLQIT 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA ML+RMY +AEK+ +K + L +G+ AGIK+ +L I+G A+GWLK Sbjct: 128 AGAGGTESCDWAAMLMRMYLMYAEKQGWKVKELNFQEGDVAGIKTVSLEIEGDFAFGWLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDSIEIEI+ +D I T R+SGAGGQ+ Sbjct: 188 GENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIEINPADYDIVTARSSGAGGQN 247 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++ V++TH PTG+ + C RSQH N+A+A MLR++LYELEL+K+ E N E+ Sbjct: 248 VNKVETKVQLTHHPTGIQISCSDSRSQHDNRAKALQMLRSQLYELELRKQMEARNAIEAD 307 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K I WG QIR+YVL PY++VKD+RT +E + VLDG++D F+K L + Sbjct: 308 KKAIEWGSQIRNYVLHPYKLVKDVRTAVETGNTDAVLDGNIDLFLKGYLMM 358 >gi|221195492|ref|ZP_03568547.1| peptide chain release factor 2 [Atopobium rimae ATCC 49626] gi|221184679|gb|EEE17071.1| peptide chain release factor 2 [Atopobium rimae ATCC 49626] Length = 371 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 156/353 (44%), Positives = 204/353 (57%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ +L+ + D + ++ L + W + A+ M L + ++ I Sbjct: 12 LTARLDEVESYLHIDEKREEIASLTQISAKADFWNDADFARQTMARLASLKDDVAGIDAA 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 +L D LEL E +D +L E+ + ++ + S + E D DA + V Sbjct: 72 HAKLEDAKAALELGSETEDAGLLAESEHLADSLARDLSELELSSWFTDELDHGDAIVTVK 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 G GG E+QDWA+ML MY R+A +R + + E E GI AT + G NAYG L+ Sbjct: 132 PGQGGLEAQDWADMLFHMYLRYAARRGWSVDIAEATPAEVIGIDRATFTVSGKNAYGMLR 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQGVHRLVRISP D RR TSF+ + V PV+ IE++I SD RID Y ASG GGQ Sbjct: 192 AEQGVHRLVRISPTDDKKRRQTSFAGVEVLPVLPAEIEVDIDPSDLRIDVYHASGPGGQG 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTGVVV CQ ERSQ +NKA A N+LR++LYE+E +KRE + Sbjct: 252 VNTTDSAVRITHIPTGVVVTCQNERSQLQNKAAAMNILRSRLYEIEREKREAELDELRGP 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIK 354 K EI +G QIRSYVL PYQ+VKDLRT E + VL DGDLD F+ A + Sbjct: 312 KHEISFGNQIRSYVLYPYQLVKDLRTGEETGNVDAVLDDGDLDPFIIAYHRWR 364 >gi|325478551|gb|EGC81663.1| peptide chain release factor 2 [Anaerococcus prevotii ACS-065-V-Col13] Length = 347 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 158/342 (46%), Positives = 220/342 (64%), Gaps = 2/342 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 LFD + L K++ P W + A+ M + + + +++D + DN + Sbjct: 4 LFDPARLKDEIEKLEKKSQSPDFWNDSDAAQKTMADLALKKDDLEDYNKLKDGIADNTDM 63 Query: 73 LELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L+L +D + + K + + ++ LSGE D N+AYL ++AGAGG E+ Sbjct: 64 LDLVELSEDSELKTIEEVEISLKKLDKLAQAMKLKTQLSGEYDKNNAYLSINAGAGGLEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA+ML RMYTR+ + R FK + ++++ E GIKS T+ +KG AYG+LKGE+GVHRL Sbjct: 124 TDWADMLFRMYTRYFDDRGFKYDIKDLNNEEAGGIKSVTIHVKGSYAYGYLKGEKGVHRL 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+DS SRRHTSFSS+ ++P +DD I+I+I SD RIDTYRASGAGGQHVN TDSAV Sbjct: 184 VRISPFDSQSRRHTSFSSVDIFPELDDDIQIDIDPSDLRIDTYRASGAGGQHVNKTDSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIPTGVV Q ERSQ +N+ A N+L +KL +++ +++ E + ++I WG Sbjct: 244 RITHIPTGVVATSQAERSQIQNRQTAMNLLMSKLVQIKEEEQREKIEDIQGKYSQIAWGS 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYV QPY MVKD RTN E + V+DG++ F+ A LA Sbjct: 304 QIRSYVFQPYTMVKDHRTNFEMGNVESVMDGNIQGFIDAYLA 345 >gi|320547182|ref|ZP_08041476.1| peptide chain release factor RF2 [Streptococcus equinus ATCC 9812] gi|320448169|gb|EFW88918.1| peptide chain release factor RF2 [Streptococcus equinus ATCC 9812] Length = 336 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 152/336 (45%), Positives = 208/336 (61%), Gaps = 2/336 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L K +P W + I A+ +E L E+Q+ + + LE+ E Sbjct: 1 MEEDIALLENKMTEPDFWNDNIAAQKTSQELNSLKQTYETFNEMQELSDETELYLEMLDE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 +D E + + + LLS D N+A LE+H G+GGTE+QDWA+ML Sbjct: 61 DDSIQSELEETLEKLD--KIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADMLF 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTR+ + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS Sbjct: 119 RMYTRYGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSFSS+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG Sbjct: 179 AKRRHTSFSSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV +R+Q+ N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFT 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RT E V+DGD+D F+ A L + Sbjct: 299 PYTMVKDHRTGYEVAQVDKVMDGDIDGFIDAFLKWR 334 >gi|315641246|ref|ZP_07896323.1| peptide chain release factor RF2 [Enterococcus italicus DSM 15952] gi|315483013|gb|EFU73532.1| peptide chain release factor RF2 [Enterococcus italicus DSM 15952] Length = 340 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 172/336 (51%), Positives = 225/336 (66%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ + +P W + A+ ++ E A E+ D L + +LLE+ E Sbjct: 1 MEEDIAEAENRMAEPGFWDDTQSAQKVINENNSNKEAFDQFHELADELEELEVLLEMIQE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D + QE + + ++ + LL G D N+A +E+H GAGGTESQDW +MLL Sbjct: 61 EPDDEMEQELATRASELLGKMSAYELAMLLDGPYDHNNAIIELHPGAGGTESQDWGSMLL 120 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RWA+KR F+ E L+ G+EAGIKS TLLIKG NA+G+LK E+GVHRLVRISP+DS Sbjct: 121 RMYQRWADKRGFQVETLDYLPGDEAGIKSVTLLIKGRNAFGYLKSEKGVHRLVRISPFDS 180 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 +RRHTSF S+ V P +DD+I+IEI+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG Sbjct: 181 ANRRHTSFCSVDVMPELDDTIDIEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPTG 240 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 VV Q +RSQ KN+ QA ML+AKLY+LE++K+E+ A + EIGWG QIRSYV Sbjct: 241 TVVASQAQRSQLKNREQAMGMLKAKLYQLEVEKQEQEAAALRGEQMEIGWGSQIRSYVFH 300 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E + V+DGD+D F+ A L K Sbjct: 301 PYSMVKDHRTNFETGNVQAVMDGDIDGFIDAYLKQK 336 >gi|302560365|ref|ZP_07312707.1| peptide chain release factor 2 [Streptomyces griseoflavus Tu4000] gi|302477983|gb|EFL41076.1| peptide chain release factor 2 [Streptomyces griseoflavus Tu4000] Length = 368 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 157/353 (44%), Positives = 218/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW N EA+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPEEAQKITSKLSHLQAEVRKAEGL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD E L +K ++ + +LLSGE DS +A + + Sbjct: 73 RGRIDDLAVLFEMAEEEDDPDTRAEAESELTLVKKALDEMEVRTLLSGEYDSREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE +E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTELIETSYAEEAGIKSTTFSVQAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + + PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ + + + Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWRK 364 >gi|291547275|emb|CBL20383.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus sp. SR1/5] Length = 332 Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 159/324 (49%), Positives = 217/324 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P W N ++M M++ + L + I ++ ++ D ++E+ EE+D I+ E Sbjct: 1 MEAPDFWDNAEASQMKMKQLKSLKDDIETYHNLETQMEDMETMIEMGYEENDPEIVPEIQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + + + ++LLSGE D +A ++++AGAGGTE+ DW ML RMY+RWAEK+ Sbjct: 61 EMLDEFQASFDSIRVKTLLSGEYDGENAIIKLNAGAGGTEACDWCGMLYRMYSRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L+ DG+EAG+KS T + G NAYG+LK E+GVHRLVRISP+++ +R TSF S Sbjct: 121 FALEVLDYLDGDEAGVKSVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + +++EI++ D RIDTYR+SGAGGQH+N T SA+RITH PTG+VVQCQ ERSQ Sbjct: 181 DVMPDIKKDLDVEINDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK +A ML+AKLY L+ Q+ EE + T+IGWG QIRSYVLQPY MVKD RTN Sbjct: 241 HMNKDKAMQMLKAKLYLLKQQEAEEKLSGIRGEVTDIGWGNQIRSYVLQPYTMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + VLDG +D F+ A L Sbjct: 301 EETGNVDAVLDGGIDIFINAYLKW 324 >gi|309809397|ref|ZP_07703259.1| peptide chain release factor 2 [Lactobacillus iners SPIN 2503V10-D] gi|312870788|ref|ZP_07730894.1| peptide chain release factor 2 [Lactobacillus iners LEAF 3008A-a] gi|312873174|ref|ZP_07733233.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2062A-h1] gi|315653886|ref|ZP_07906802.1| peptide chain release factor RF2 [Lactobacillus iners ATCC 55195] gi|308170308|gb|EFO72339.1| peptide chain release factor 2 [Lactobacillus iners SPIN 2503V10-D] gi|311091407|gb|EFQ49792.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2062A-h1] gi|311093664|gb|EFQ52002.1| peptide chain release factor 2 [Lactobacillus iners LEAF 3008A-a] gi|315488582|gb|EFU78228.1| peptide chain release factor RF2 [Lactobacillus iners ATCC 55195] Length = 359 Score = 260 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 154/351 (43%), Positives = 220/351 (62%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + LGGLFD+DN + ++ K D W + A+ ++ ++ + + + Sbjct: 1 MKNNCHILGGLFDFDNLKESIAINEQKMADDTFWNDQTNAQKIIEATNYMREKVDKYQTL 60 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D +EL E + +L E + ++++K E + LLSG+ D ++A LE+H Sbjct: 61 SSALADAKTAVELYNMEPENDMLMEITAEVEKLKNEFNDYELHLLLSGKYDDHNALLEIH 120 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTE+ DWANML RMY RW + E + G+EAG+KS ++ ++G NA+G LK Sbjct: 121 SGAGGTEAMDWANMLFRMYQRWCDSHNLTFEVDDFQVGDEAGLKSVSVRVQGNNAFGLLK 180 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DS RRHTSF+S+ V P +D SI IEI+ D RID YR+SGAGGQH Sbjct: 181 SENGVHRLVRISPFDSAKRRHTSFASVEVIPEIDKSINIEINPDDLRIDVYRSSGAGGQH 240 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T SAVRITH+PTG+V Q +RSQ +N+ A +MLRAKL++LE K+ + + + Sbjct: 241 INKTSSAVRITHLPTGIVTSSQAQRSQFQNRETAMDMLRAKLFKLEEDKKRKQTEALKGN 300 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + EI +G QIRSYV PY MVKD RT+ E + V++G+LD F+ A L Sbjct: 301 QKEINFGSQIRSYVFHPYNMVKDHRTDYETSDTIGVMNGNLDPFIYAYLQW 351 >gi|13470493|ref|NP_102062.1| peptide chain release factor 2 [Mesorhizobium loti MAFF303099] gi|14021235|dbj|BAB47848.1| translation releasing factor RF-2 [Mesorhizobium loti MAFF303099] Length = 340 Score = 260 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 224/326 (68%), Positives = 273/326 (83%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 + ED LW +EA+ LMRERQ L+ I+ +K + L DN+ L+EL EE D ++ E Sbjct: 2 RAEDASLWNEPLEAQKLMRERQGLEEGIAAVKGLTQALEDNIGLIELGEEEGDEGVITEA 61 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++ ++ E + +Q E+LLSGEAD+ND YLE+HAGAGGTESQDWA+MLLRMYTRWAE+R Sbjct: 62 EAAIRSMQGEAKARQVETLLSGEADANDTYLEIHAGAGGTESQDWASMLLRMYTRWAERR 121 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 +FK E LE+HDGEEAGIKSATL+IKG NAYGWLK E GVHRLVRISPYDSN+RRHTSF+S Sbjct: 122 RFKVEVLEVHDGEEAGIKSATLMIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFAS 181 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 +WVYPV+DD+IEI++SESD RIDTYR+SG+GGQHVNTTDSAVRITHI TG+ V CQ ERS Sbjct: 182 VWVYPVIDDTIEIDVSESDVRIDTYRSSGSGGQHVNTTDSAVRITHIATGIAVACQAERS 241 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QHKN+A+AW MLR++LYE EL+KRE IAN E+SK++IGWG QIRSYVLQPYQ+VKDLRT Sbjct: 242 QHKNRAKAWEMLRSRLYEEELKKREAIANATEASKSDIGWGHQIRSYVLQPYQLVKDLRT 301 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354 +E TSPS VLDGDLDDFM+A+L+ + Sbjct: 302 GVESTSPSSVLDGDLDDFMEASLSQR 327 >gi|320010490|gb|ADW05340.1| peptide chain release factor 2 [Streptomyces flavogriseus ATCC 33331] Length = 368 Score = 260 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 154/353 (43%), Positives = 217/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMGSIEAVLDLDALRVDIAALEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTETL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA +E D L E L+ ++ ++ + +LLSGE D+ +A + + Sbjct: 73 RGRIDDLEVLFELAEDEGDADALAEAESELESVRKALDEMEVRTLLSGEYDAREALVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAERHNYKTEVYETAYAEEAGIKSTTFAVEVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + +EI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHVEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ + N + Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMNALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEFEMGNPEAVFNGEIDGFVEAGIRWRK 364 >gi|309803856|ref|ZP_07697941.1| peptide chain release factor 2 [Lactobacillus iners LactinV 11V1-d] gi|325913296|ref|ZP_08175664.1| peptide chain release factor 2 [Lactobacillus iners UPII 60-B] gi|329920534|ref|ZP_08277266.1| peptide chain release factor 2 [Lactobacillus iners SPIN 1401G] gi|308164090|gb|EFO66352.1| peptide chain release factor 2 [Lactobacillus iners LactinV 11V1-d] gi|325477399|gb|EGC80543.1| peptide chain release factor 2 [Lactobacillus iners UPII 60-B] gi|328936210|gb|EGG32663.1| peptide chain release factor 2 [Lactobacillus iners SPIN 1401G] Length = 359 Score = 260 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 154/351 (43%), Positives = 220/351 (62%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + LGGLFD+DN + ++ K D W + A+ ++ ++ + + + Sbjct: 1 MKNNYHILGGLFDFDNLKESIAINEQKMADDTFWNDQTNAQKIIEATNYMREKVDKYQTL 60 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D +EL E + +L E + ++++K E + LLSG+ D ++A LE+H Sbjct: 61 SSALADAKTAVELYNMEPENDMLMEITAEVEKLKNEFNNYELHLLLSGKYDDHNALLEIH 120 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTE+ DWANML RMY RW + E + G+EAG+KS ++ ++G NA+G LK Sbjct: 121 SGAGGTEAMDWANMLFRMYQRWCDSHNLTFEVDDFQVGDEAGLKSVSVRVQGNNAFGLLK 180 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DS RRHTSF+S+ V P +D SI IEI+ D RID YR+SGAGGQH Sbjct: 181 SENGVHRLVRISPFDSAKRRHTSFASVEVIPEIDKSINIEINPDDLRIDVYRSSGAGGQH 240 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T SAVRITH+PTG+V Q +RSQ +N+ A +MLRAKL++LE K+ + + + Sbjct: 241 INKTSSAVRITHLPTGIVTSSQAQRSQFQNRETAMDMLRAKLFKLEEDKKRKQTEALKGN 300 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + EI +G QIRSYV PY MVKD RT+ E + V++G+LD F+ A L Sbjct: 301 QKEINFGSQIRSYVFHPYNMVKDHRTDYETSDTIGVMNGNLDPFIYAYLQW 351 >gi|315634626|ref|ZP_07889910.1| peptide chain release factor RF2 [Aggregatibacter segnis ATCC 33393] gi|315476574|gb|EFU67322.1| peptide chain release factor RF2 [Aggregatibacter segnis ATCC 33393] Length = 325 Score = 260 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 173/324 (53%), Positives = 230/324 (70%), Gaps = 1/324 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P +W + +A+ L +ER L+ ++ IK ++ L D LLELA+E D E Sbjct: 1 MEQPDVWNDADKAQALGKERVSLEQVVNTIKNLEQGLEDVDGLLELAVEAGDEDTFNEAV 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L ++ ++ +F + SGE D+ D Y+++ AG+GGTE+QDW MLLRMY RWAE + Sbjct: 61 AELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FKTE +E+ DG+ AG+KSAT+ + G A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ Sbjct: 121 FKTELMEVSDGDVAGVKSATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAA 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITH+P+G+VVQCQ +RSQ Sbjct: 181 FVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 HKNK QA L+AKLYELELQK+ E +K++IGWG QIRSYVL +KDLRT Sbjct: 241 HKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 +E + VLDGDLD F++A+L Sbjct: 300 VENRNTQAVLDGDLDRFIEASLKA 323 >gi|163816074|ref|ZP_02207444.1| hypothetical protein COPEUT_02254 [Coprococcus eutactus ATCC 27759] gi|158448884|gb|EDP25879.1| hypothetical protein COPEUT_02254 [Coprococcus eutactus ATCC 27759] Length = 370 Score = 260 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 169/350 (48%), Positives = 229/350 (65%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 L + D +N R++ LN + E P W +V ++ + RE ++L + + K+++ Sbjct: 15 KEPLEEVKSSLDIENKTDRIAKLNYEMEQPSFWDDVDRSREVSRELKNLQDLVDNYKKLE 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D L+ +A EE+D S++ E + + K E E + L + E D +A L +H+ Sbjct: 75 NDYLDIDTLILMAEEENDSSLIPEIGEQIDIFKKEFEEYRINLLFTDEFDDCNAVLTLHS 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G GGTES DWA+ML RMYTRWAEK E L+ +G+EAGIKS T+ I GP+AYG+LK Sbjct: 135 GEGGTESCDWASMLYRMYTRWAEKHGMSVEVLDFLEGDEAGIKSVTIQINGPHAYGYLKS 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP++S +R TSF+S V P ++ +EIEI + D RIDTYR+SGAGGQH+ Sbjct: 195 EKGVHRLVRISPFNSAGKRMTSFASCDVIPDIEQDLEIEIRDEDIRIDTYRSSGAGGQHI 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SA+RITH PTG+VVQCQ ERSQ NK +A ML++KLY L+ Q+ E + Sbjct: 255 NKTSSAIRITHFPTGIVVQCQNERSQLMNKNKAMQMLKSKLYLLKKQENLERISDIRGEV 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 T+ G+G QIRSYVLQPY MVKD RT+ E ++ S VLDGDLD FM A L Sbjct: 315 TDNGFGSQIRSYVLQPYTMVKDKRTSYENSNVSAVLDGDLDGFMTAYLKW 364 >gi|270157123|ref|ZP_06185780.1| peptide chain release factor 2 [Legionella longbeachae D-4968] gi|289164472|ref|YP_003454610.1| peptide chain release factor 2 [Legionella longbeachae NSW150] gi|269989148|gb|EEZ95402.1| peptide chain release factor 2 [Legionella longbeachae D-4968] gi|288857645|emb|CBJ11485.1| putative peptide chain release factor 2 [Legionella longbeachae NSW150] Length = 336 Score = 260 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 170/330 (51%), Positives = 230/330 (69%), Gaps = 1/330 (0%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 + + E +W N A+ L RE+ L+ +S + ++ + D L E+A EE D Sbjct: 2 EEVVRELESSTIWDNPEVAQALGREQTQLEALVSTLTQLGQSITDLNELFEMAREESDEQ 61 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 + E S+ LQ ++ +V +F + SG+ D ++AYL++ +G+GGTE+QDWA MLLRMY R Sbjct: 62 TINEISEELQTVEKKVADLEFRRMFSGKMDDSNAYLDIQSGSGGTEAQDWAEMLLRMYLR 121 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 W E+ F TE +E G+ AGIKSAT+ +G A+GWL+ E GVHRLVR SP+DS +RRH Sbjct: 122 WGEQHGFTTELIECSPGDVAGIKSATIYFQGEYAFGWLRTETGVHRLVRKSPFDSGNRRH 181 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TSF++++V P +DD I+IEI+ +D RIDTYRASGAGGQHVN TDSAVRITH P+G+VVQC Sbjct: 182 TSFAAVFVSPEIDDDIDIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHAPSGIVVQC 241 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 Q +RSQH+NK QA LRAKLYELE+QK+ E+SK++IGWG QIRSYVL + Sbjct: 242 QTDRSQHRNKDQAMKQLRAKLYELEMQKKNAEQQALEASKSDIGWGSQIRSYVLD-QSRI 300 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KDLRT +E ++ VLDG LD F++A+L Sbjct: 301 KDLRTGVETSNTQAVLDGALDQFIEASLKA 330 >gi|1402638|dbj|BAA13170.1| PrfB [Streptomyces coelicolor] Length = 368 Score = 260 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 153/353 (43%), Positives = 216/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLDRLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD E L ++ ++ + +LLSGE D+ +A + + Sbjct: 73 RGRIDDLGVLFEMAEEEDDPDTRAEAESELAAVRKALDEMEVRTLLSGEYDAREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTEVYETSYAEEAGIKSTTFAVQSPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + + PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ + + + Sbjct: 253 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG ++RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 313 GGN-SWGNRVRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRK 364 >gi|319939454|ref|ZP_08013814.1| peptide chain release factor 2 [Streptococcus anginosus 1_2_62CV] gi|319811440|gb|EFW07735.1| peptide chain release factor 2 [Streptococcus anginosus 1_2_62CV] Length = 325 Score = 260 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 146/325 (44%), Positives = 203/325 (62%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + + A+ +E L +++ D ++ ILL+ E+D E Sbjct: 1 MTEPDFWDDNVAAQKTSQELNELKQTYDNFQQMTDLFDESEILLDFLAEDDSFQEELEEK 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + + LLS D+N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 61 LAELETR--MTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAHG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GP+AYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEIE+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG+V Q +R+Q Sbjct: 179 EVMPELDDTIEIEVRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A +L+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT Sbjct: 239 YGNRDRAMKLLQAKLYQMEQEKKAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTG 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|315658891|ref|ZP_07911758.1| peptide chain release factor RF2 [Staphylococcus lugdunensis M23590] gi|315496015|gb|EFU84343.1| peptide chain release factor RF2 [Staphylococcus lugdunensis M23590] Length = 334 Score = 260 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 155/327 (47%), Positives = 214/327 (65%), Gaps = 1/327 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +P+ W + +A+ ++ + L ++ + + D EL EE D + E Sbjct: 1 MMTEPNFWDDQNKAQDIIDKNNALKAITMGYHDLDNEVEDMFATTELLQEEYDEDMKAEL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 N+ +++ + + LL G D+N+A LE+H GAGGTESQDWA+MLLRMY R+ E+ Sbjct: 61 EMNVLAFNDKLDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYCEQN 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E ++ G+EAGIKS TLL+KG NAYG+LK E+GVHRLVRISP+D++ RRHTSF+S Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLLVKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFAS 180 Query: 209 IWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P ++ IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ER Sbjct: 181 CDVIPDFNNNEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KN+ A ML++KLY+L+L+++ + + EIGWG QIRSYV PY MVKD R Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAQEMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354 TN E V+DGD+ F++A L + Sbjct: 301 TNEETGKVDAVMDGDIGPFIEAYLRQQ 327 >gi|333024883|ref|ZP_08452947.1| putative peptide chain release factor 2 [Streptomyces sp. Tu6071] gi|332744735|gb|EGJ75176.1| putative peptide chain release factor 2 [Streptomyces sp. Tu6071] Length = 373 Score = 260 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 156/353 (44%), Positives = 217/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D + ++ L + P LW + A+ + + HL + + + Sbjct: 15 LSSTMESIEAVLDLDKMREDIASLEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEGL 74 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA +E D +E L ++ ++ + +LLSGE DS +A + + Sbjct: 75 RGRIDDLGVLFELAADEGDADTQEEAEQELAAVRKALDEMEVRTLLSGEYDSREAVVTIR 134 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T + P AYG L Sbjct: 135 AEAGGVDASDFAERLQRMYLRWAERLGYKTELYETSYAEEAGIKSTTFAVHVPYAYGTLS 194 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 195 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 254 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ +E N + Sbjct: 255 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQEKMNALKGD 314 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 315 GGN-SWGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRK 366 >gi|322374638|ref|ZP_08049152.1| peptide chain release factor 2 [Streptococcus sp. C300] gi|321280138|gb|EFX57177.1| peptide chain release factor 2 [Streptococcus sp. C300] Length = 329 Score = 260 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 152/328 (46%), Positives = 209/328 (63%), Gaps = 2/328 (0%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 K +P W + I A+ +E L N + +++++ + ILL+ +D S+ Sbjct: 2 ENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDF--LAEDESVHD 59 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E + L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 60 ELVEQLTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGN 119 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF Sbjct: 120 AKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSF 179 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG VVQ + Sbjct: 180 TSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVD 239 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 R+Q+ N+ +A ML+ KLY++E +K+ + + K EI WG QIRSYV PY MVKD Sbjct: 240 RTQYGNRDRAMKMLQTKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDH 299 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RT+ E V+DGDLD F+ A L + Sbjct: 300 RTSFEVAQVDKVMDGDLDGFIDAYLKWR 327 >gi|259501054|ref|ZP_05743956.1| peptide chain release factor RF2 [Lactobacillus iners DSM 13335] gi|309807259|ref|ZP_07701230.1| peptide chain release factor 2 [Lactobacillus iners LactinV 03V1-b] gi|309808840|ref|ZP_07702723.1| peptide chain release factor 2 [Lactobacillus iners LactinV 01V1-a] gi|312874339|ref|ZP_07734370.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2052A-d] gi|312875084|ref|ZP_07735101.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2053A-b] gi|325911468|ref|ZP_08173880.1| peptide chain release factor 2 [Lactobacillus iners UPII 143-D] gi|259167748|gb|EEW52243.1| peptide chain release factor RF2 [Lactobacillus iners DSM 13335] gi|308166350|gb|EFO68558.1| peptide chain release factor 2 [Lactobacillus iners LactinV 03V1-b] gi|308167916|gb|EFO70051.1| peptide chain release factor 2 [Lactobacillus iners LactinV 01V1-a] gi|311089374|gb|EFQ47801.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2053A-b] gi|311090105|gb|EFQ48518.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2052A-d] gi|325476818|gb|EGC79972.1| peptide chain release factor 2 [Lactobacillus iners UPII 143-D] Length = 359 Score = 260 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 154/351 (43%), Positives = 220/351 (62%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + LGGLFD+DN + ++ K D W + A+ ++ ++ + + + Sbjct: 1 MKNNCHILGGLFDFDNLKESIAINEQKMADDTFWNDQTNAQKIIEATNYMREKVDKYQTL 60 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D +EL E + +L E + ++++K E + LLSG+ D ++A LE+H Sbjct: 61 SSALADAKTAVELYNMEPENDMLMEITAEVEKLKNEFNNYELHLLLSGKYDDHNALLEIH 120 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTE+ DWANML RMY RW + E + G+EAG+KS ++ ++G NA+G LK Sbjct: 121 SGAGGTEAMDWANMLFRMYQRWCDSHNLTFEVDDFQVGDEAGLKSVSVRVQGNNAFGLLK 180 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DS RRHTSF+S+ V P +D SI IEI+ D RID YR+SGAGGQH Sbjct: 181 SENGVHRLVRISPFDSAKRRHTSFASVEVIPEIDKSINIEINPDDLRIDVYRSSGAGGQH 240 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T SAVRITH+PTG+V Q +RSQ +N+ A +MLRAKL++LE K+ + + + Sbjct: 241 INKTSSAVRITHLPTGIVTSSQAQRSQFQNRETAMDMLRAKLFKLEEDKKRKQTEALKGN 300 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + EI +G QIRSYV PY MVKD RT+ E + V++G+LD F+ A L Sbjct: 301 QKEINFGSQIRSYVFHPYNMVKDHRTDYETSDTIGVMNGNLDPFIYAYLQW 351 >gi|81428109|ref|YP_395108.1| peptide chain release factor 2 [Lactobacillus sakei subsp. sakei 23K] gi|78609750|emb|CAI54796.1| Peptide chain release factor 2 [Lactobacillus sakei subsp. sakei 23K] Length = 332 Score = 260 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 162/325 (49%), Positives = 213/325 (65%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + A+ L+ + L ++Q + + + LEL EE D + Sbjct: 1 MGDPDFWNDQQSAQQLIDQNNVLKEKYDSFNQLQAQFEELSVTLELLQEEPDDELQASFE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +L++I+ ++ + LLSGE DSN+A +E+H GAGGTESQDW MLLRMY RWA+ Sbjct: 61 ADLEQIQSQMRQYELGQLLSGEYDSNNAIVELHPGAGGTESQDWGAMLLRMYLRWADAHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E + GEEAGIKS TL+IKG NAYG L+ E+GVHRLVRISP+DS RRHTSF S+ Sbjct: 121 FTVETEDYQAGEEAGIKSVTLMIKGHNAYGLLRSEKGVHRLVRISPFDSAGRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D SI+IE+ D R+D +R+SGAGGQH+N T SAVR+TH+PTG+VV Q +RSQ Sbjct: 181 DVMPELDGSIDIEVRTEDLRVDVFRSSGAGGQHINKTSSAVRLTHLPTGIVVSSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A NML+AKLY+ E +++ + A + + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LQNRETAMNMLKAKLYQKEQEEQAKKAAAIKGEQLEIGWGSQIRSYVFHPYTMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD FM A L + Sbjct: 301 YETGNGQAVMDGDLDPFMYAYLQWQ 325 >gi|169832431|ref|YP_001694217.1| peptide chain release factor 2 [Streptococcus pneumoniae Hungary19A-6] gi|172079637|ref|ZP_02709786.2| peptide chain release factor 2 [Streptococcus pneumoniae CDC1873-00] gi|183603431|ref|ZP_02717047.2| peptide chain release factor 2 [Streptococcus pneumoniae CDC3059-06] gi|183603478|ref|ZP_02714985.2| peptide chain release factor 2 [Streptococcus pneumoniae CDC0288-04] gi|225854263|ref|YP_002735775.1| peptide chain release factor 2 [Streptococcus pneumoniae JJA] gi|237650402|ref|ZP_04524654.1| peptide chain release factor 2 [Streptococcus pneumoniae CCRI 1974] gi|237822484|ref|ZP_04598329.1| peptide chain release factor 2 [Streptococcus pneumoniae CCRI 1974M2] gi|303260019|ref|ZP_07345993.1| peptide chain release factor 2 [Streptococcus pneumoniae SP-BS293] gi|303261425|ref|ZP_07347373.1| peptide chain release factor 2 [Streptococcus pneumoniae SP14-BS292] gi|303264092|ref|ZP_07350013.1| peptide chain release factor 2 [Streptococcus pneumoniae BS397] gi|303266295|ref|ZP_07352186.1| peptide chain release factor 2 [Streptococcus pneumoniae BS457] gi|303269536|ref|ZP_07355300.1| peptide chain release factor 2 [Streptococcus pneumoniae BS458] gi|307127694|ref|YP_003879725.1| peptide chain release factor 2 [Streptococcus pneumoniae 670-6B] gi|168994933|gb|ACA35545.1| peptide chain release factor 2 [Streptococcus pneumoniae Hungary19A-6] gi|172041988|gb|EDT50034.1| peptide chain release factor 2 [Streptococcus pneumoniae CDC1873-00] gi|183574752|gb|EDT95280.1| peptide chain release factor 2 [Streptococcus pneumoniae CDC0288-04] gi|183576822|gb|EDT97350.1| peptide chain release factor 2 [Streptococcus pneumoniae CDC3059-06] gi|225722944|gb|ACO18797.1| peptide chain release factor 2 [Streptococcus pneumoniae JJA] gi|302637559|gb|EFL68046.1| peptide chain release factor 2 [Streptococcus pneumoniae SP14-BS292] gi|302638938|gb|EFL69399.1| peptide chain release factor 2 [Streptococcus pneumoniae SP-BS293] gi|302640921|gb|EFL71304.1| peptide chain release factor 2 [Streptococcus pneumoniae BS458] gi|302644225|gb|EFL74481.1| peptide chain release factor 2 [Streptococcus pneumoniae BS457] gi|302646497|gb|EFL76723.1| peptide chain release factor 2 [Streptococcus pneumoniae BS397] gi|306484756|gb|ADM91625.1| peptide chain release factor 2 [Streptococcus pneumoniae 670-6B] Length = 329 Score = 260 bits (663), Expect = 3e-67, Method: Composition-based stats. Identities = 150/328 (45%), Positives = 205/328 (62%), Gaps = 2/328 (0%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 K +P W + I A+ +E L N + ++++ + ILL+ E++ Sbjct: 2 ENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHDEL 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 62 VAQLAELD--KIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGN 119 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF Sbjct: 120 AKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSF 179 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ + Sbjct: 180 TSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVD 239 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 R+Q+ N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD Sbjct: 240 RTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDH 299 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RT+ E V+DGDLD F+ A L + Sbjct: 300 RTSFEVAQVDKVMDGDLDGFIDAYLKWR 327 >gi|315612838|ref|ZP_07887749.1| peptide chain release factor RF2 [Streptococcus sanguinis ATCC 49296] gi|315314948|gb|EFU62989.1| peptide chain release factor RF2 [Streptococcus sanguinis ATCC 49296] Length = 329 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 153/328 (46%), Positives = 210/328 (64%), Gaps = 2/328 (0%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 K +P W + I A+ +E L N + +++++ + ILL+ +D S+ Sbjct: 2 ENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDF--LAEDESVHD 59 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E + L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 60 ELVEQLTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGN 119 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF Sbjct: 120 AKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSF 179 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG VVQ + Sbjct: 180 TSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVD 239 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 R+Q+ N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD Sbjct: 240 RTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDH 299 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RT+ E V+DGDLD F+ A L + Sbjct: 300 RTSFEVAQVDKVMDGDLDGFIDAYLKWR 327 >gi|212702489|ref|ZP_03310617.1| hypothetical protein DESPIG_00506 [Desulfovibrio piger ATCC 29098] gi|212674150|gb|EEB34633.1| hypothetical protein DESPIG_00506 [Desulfovibrio piger ATCC 29098] Length = 366 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 168/347 (48%), Positives = 227/347 (65%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD + QRL+ + T+ P+ W N L+RE++ L++ ++ + ++ Sbjct: 15 TTFGGVFDVAASEQRLAAIETELSRPNAWDNPEALTPLLREKRQLEDEVARLNALKTCHD 74 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D LELA+E + L+ + + ++ + LLSGE D+ DA LE+H GAGG Sbjct: 75 DMHEWLELAVESGEDEALESLAKQQDSLDALLDETELVMLLSGEEDNQDAILEIHPGAGG 134 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TESQDWA MLLRMYTRWA +R F E L+ G+EAGIKS TL I GP+A+G+LK E+G+ Sbjct: 135 TESQDWAEMLLRMYTRWAARRHFTVEELDYLPGDEAGIKSVTLRISGPHAFGFLKSERGI 194 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRL+RISP+D++ RRHTSF+S+ V P V D I+++I E+D R DT+R+SG GGQ VNTT Sbjct: 195 HRLIRISPFDASGRRHTSFASVDVMPDVGDDIQLDIKETDLRFDTFRSSGPGGQSVNTTS 254 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+ QCQ E+SQH NK A +L+A+LY LELQKRE + K I Sbjct: 255 SAVRVTHIPTGISAQCQNEKSQHHNKEAALCILKARLYNLELQKREAERAAQYAGKDAIA 314 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +G QIR+Y LQPY++VKD RTN E VLDG +D F L + Sbjct: 315 FGSQIRTYTLQPYRLVKDHRTNSECGDVEAVLDGQIDQFQHDYLLYR 361 >gi|187250476|ref|YP_001874958.1| peptide chain release factor 2 [Elusimicrobium minutum Pei191] gi|186970636|gb|ACC97621.1| Peptide chain release factor 2 [Elusimicrobium minutum Pei191] Length = 371 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 164/350 (46%), Positives = 224/350 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LS ++ G L ++L+ L + W + A+ + +E + + Sbjct: 15 ELSARIKNAGALIRVGEKKEKLAKLEAEISKESFWNDSDNARQVSKEADAVKTELETFSA 74 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +Q + D + E+ALEE+ + + E S L +I+ E++ +F+ LS AD +A + + Sbjct: 75 LQKEMDDAVTYYEMALEENSETEMGEISSFLIKIENELKEIEFKIKLSDPADRLNAIMHI 134 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTES DWA MLLRMYTRWAE K + +I GEEAG+KS +L+I+G AYG+L Sbjct: 135 HAGAGGTESCDWAQMLLRMYTRWAENHGLKVKITDILPGEEAGVKSVSLMIEGLYAYGYL 194 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D+NSRRHTSF+S V P ++D I+IEI E D +DT+R+ GAGGQ Sbjct: 195 KSENGVHRLVRISPFDANSRRHTSFASCDVLPDIEDEIKIEIEEKDLEVDTFRSGGAGGQ 254 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN ++AVRI HIPTG+VV CQ ERSQ +N+ A MLRAKLY++E K+ Sbjct: 255 NVNKVETAVRIKHIPTGIVVACQIERSQLQNRQTAMKMLRAKLYQIEADKKRSEMEKHYG 314 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K +I WG QIRSYV PYQ+VKDLRT E + V+DGDLD FM++ L Sbjct: 315 QKGDIAWGHQIRSYVFMPYQLVKDLRTGYETSQVQAVMDGDLDAFMQSYL 364 >gi|302521474|ref|ZP_07273816.1| peptide chain release factor 2 [Streptomyces sp. SPB78] gi|318056789|ref|ZP_07975512.1| peptide chain release factor 2 [Streptomyces sp. SA3_actG] gi|318081122|ref|ZP_07988454.1| peptide chain release factor 2 [Streptomyces sp. SA3_actF] gi|302430369|gb|EFL02185.1| peptide chain release factor 2 [Streptomyces sp. SPB78] Length = 371 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 156/353 (44%), Positives = 217/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D + ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLDKMREDIASLEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEGL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA +E D +E L ++ ++ + +LLSGE DS +A + + Sbjct: 73 RGRIDDLGVLFELAADEGDADTQEEAEQELAAVRKALDEMEVRTLLSGEYDSREAVVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T + P AYG L Sbjct: 133 AEAGGVDASDFAERLQRMYLRWAERLGYKTELYETSYAEEAGIKSTTFAVHVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ +E N + Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQEKMNALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRK 364 >gi|260584689|ref|ZP_05852435.1| peptide chain release factor 2 [Granulicatella elegans ATCC 700633] gi|260157712|gb|EEW92782.1| peptide chain release factor 2 [Granulicatella elegans ATCC 700633] Length = 331 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 157/324 (48%), Positives = 214/324 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + +A+M++++ L +++ ++ + +L E+ E+ + I E Sbjct: 1 MSEPGFWDDNEKAQMVIQKSNELKAVYDTFHQLELQVEEVELLFEMYKEDPEEEIHDELV 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + ++ E+E + LLSG D A LE+H GAGGTESQDW +MLLRMYTRWAE+ Sbjct: 61 ERVHSVEKELEKYELSMLLSGPHDKCSAILEIHPGAGGTESQDWGSMLLRMYTRWAEQHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 ++ E ++ DGEEAGIKS TL I+G NAYG+LK E+GVHRLVRISP+D+ +RHTSF SI Sbjct: 121 YRIETVDYQDGEEAGIKSVTLSIEGLNAYGYLKSEKGVHRLVRISPFDAAGKRHTSFCSI 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + P ++ I+IEI+ D +ID YRASGAGGQH+N T SAVRITHIPTG+V Q Q +RSQ Sbjct: 181 DIMPQLEGDIDIEINPDDLKIDVYRASGAGGQHINKTSSAVRITHIPTGIVTQSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KNK QA ML+ KLY+LE +K+ + +I WG QIR+YV PY +VKDLR+ Sbjct: 241 FKNKDQAMAMLKTKLYQLEEEKKAAELAEIRGEQKDIAWGSQIRNYVFHPYSLVKDLRSG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + V+DGDLD FM A L Sbjct: 301 HETGNIGAVMDGDLDPFMDAYLKW 324 >gi|116873873|ref|YP_850654.1| peptide chain release factor 2 [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742751|emb|CAK21875.1| peptide chain release factor 2 [Listeria welshimeri serovar 6b str. SLCC5334] Length = 327 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 168/325 (51%), Positives = 214/325 (65%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP+ W + A+ ++ E +++ I LEL EE D + E Sbjct: 1 MLDPNFWNDQQAAQKIINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQAELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + + + +LS D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ Sbjct: 61 KDITAYMATINEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+ Sbjct: 121 FKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ Sbjct: 181 DVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML+ KLY+ E +++E + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNRDQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLDDF+ A L + Sbjct: 301 YETGNIQAVMDGDLDDFINAYLRSR 325 >gi|330465934|ref|YP_004403677.1| peptide chain release factor 2 [Verrucosispora maris AB-18-032] gi|328808905|gb|AEB43077.1| peptide chain release factor 2 [Verrucosispora maris AB-18-032] Length = 373 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 162/355 (45%), Positives = 220/355 (61%), Gaps = 5/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D + L + P LW + A+ + + +++ I + + Sbjct: 13 LDATLRNIEAVLDLDRLRADKARLEQEASAPDLWDDQARAQQVTSQLSYVNGEIEKLGSL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +LLELA E D +L E + + ++ + +LLSGE DS +A + + Sbjct: 73 RSRIDDANVLLELAEAEADSGVLSEVESEITGLAKAIQEMEVRTLLSGEYDSREALVAIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A MLLRMY RWAE+ + TE E EEAG+KSAT +K P AYG L Sbjct: 133 AGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFTVKVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+ + V PVV+ + I+I E++ RID YR+SG GGQ Sbjct: 193 VESGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDSIDIPENEMRIDVYRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV CQ E+SQ +NKA A +L+A+L E +KR+E Sbjct: 253 VNTTDSAVRITHIPTGIVVTCQNEKSQLQNKASALRVLQARLLE---RKRQEEQAKMAGL 309 Query: 303 KTEI--GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 KT+ WG Q+RSYVL PYQMVKDLRT E +PS V DGDLD F++A + +K Sbjct: 310 KTDAAGSWGDQMRSYVLHPYQMVKDLRTEQETGNPSAVFDGDLDSFIEAGIRWRK 364 >gi|171780065|ref|ZP_02920969.1| hypothetical protein STRINF_01853 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281413|gb|EDT46848.1| hypothetical protein STRINF_01853 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 336 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 150/336 (44%), Positives = 208/336 (61%), Gaps = 2/336 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L K +P W + I A+ +E L E+Q+ + + LE+ E Sbjct: 1 MEEDIALLENKMTEPDFWNDNIAAQKTSQELNGLKQTYETFNEMQELSDETELYLEMLDE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 +D E + + + LLS D N+A LE+H G+GGTE+QDWA+ML Sbjct: 61 DDSIQAELEETLEKLD--KIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADMLF 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTR+ + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS Sbjct: 119 RMYTRYGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSFSS+ V P +DD++E+EI + D ++DT+R+ GAGGQ+VN + +R+THIPTG Sbjct: 179 AKRRHTSFSSVEVMPELDDTVEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGIRLTHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV +R+Q+ N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFT 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RT E V+DGD+D F+ A L + Sbjct: 299 PYTMVKDHRTGYEVAQVDKVMDGDIDGFIDAFLKWR 334 >gi|289551384|ref|YP_003472288.1| peptide chain release factor 2 [Staphylococcus lugdunensis HKU09-01] gi|289180915|gb|ADC88160.1| peptide chain release factor 2 [Staphylococcus lugdunensis HKU09-01] Length = 334 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 154/327 (47%), Positives = 214/327 (65%), Gaps = 1/327 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +P+ W + +A+ ++ + L ++ + + D EL EE D + E Sbjct: 1 MMTEPNFWDDQNKAQDIIDKNNALKAITMGYHDLDNEVEDMFATTELLQEEYDEDMKAEL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++ +++ + + LL G D+N+A LE+H GAGGTESQDWA+MLLRMY R+ E+ Sbjct: 61 EMDVLAFNDKLDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYCEQN 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E ++ G+EAGIKS TLL+KG NAYG+LK E+GVHRLVRISP+D++ RRHTSF+S Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLLVKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFAS 180 Query: 209 IWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P ++ IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ER Sbjct: 181 CDVIPDFNNNEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KN+ A ML++KLY+L+L+++ + + EIGWG QIRSYV PY MVKD R Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAQEMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354 TN E V+DGD+ F++A L + Sbjct: 301 TNEETGKVDAVMDGDIGPFIEAYLRQQ 327 >gi|239941657|ref|ZP_04693594.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL 15998] gi|239988119|ref|ZP_04708783.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL 11379] Length = 352 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 153/349 (43%), Positives = 213/349 (61%), Gaps = 1/349 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + + + D D ++ L + P LW + A+ + + HL + + ++ R+ Sbjct: 1 MGSIEAVLDLDALRADIAALEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEALRGRI 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D +L ELA E D E L+ +K ++ + +LLSGE D+ +A + + A AG Sbjct: 61 DDLEVLFELAEAEGDADAQAEAETELESVKKALDEMEVRTLLSGEYDAREALVTIRAEAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L EQG Sbjct: 121 GVDAADFAEKLQRMYLRWAEQHNYKTEVYETAYAEEAGIKSTTFAVQVPYAYGTLSVEQG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ VNTT Sbjct: 181 THRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ + N + Sbjct: 241 DSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMNALKGDGGN- 299 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 300 SWGNQMRSYVLHPYQMVKDLRTEFEMGNPEAVFNGEIDGFVEAGIRWRK 348 >gi|134300908|ref|YP_001114404.1| peptide chain release factor 2 [Desulfotomaculum reducens MI-1] gi|134053608|gb|ABO51579.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfotomaculum reducens MI-1] Length = 332 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 156/324 (48%), Positives = 213/324 (65%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 W ++ ++ + ++ L + ++ ++ L D ++LEL EE D + +E S Sbjct: 1 MLKDGFWDDLTYSQKVSQKLAGLKDRVAAFNTLESSLQDLEVMLELCQEEQDPLLEEEFS 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L + +E + E +L+G D DA L +H GAGGTESQDWA MLLRMYTR+ E Sbjct: 61 SELSTLTGRLEEMELEIMLAGPYDRGDAILSLHPGAGGTESQDWAQMLLRMYTRYCENHN 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K E L++ G+EAGIKSAT+ + GPNAYG+L+ E+GVHRLVRISP+D+ RRHTSF+S+ Sbjct: 121 YKVEILDLLPGDEAGIKSATIQVTGPNAYGYLRCEKGVHRLVRISPFDAAGRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P+VDD +E+ I D RIDTYRA GAGGQHVN TDSAVRITH+PTG+VV CQ ERSQ Sbjct: 181 DVLPLVDDEVEVNIRPEDLRIDTYRAGGAGGQHVNKTDSAVRITHLPTGIVVACQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 N+ A +L++KL +LELQK+E+ + +I WG QIRSYV PY + KD RT Sbjct: 241 TTNRQAAMKLLKSKLIDLELQKKEDEMAALRGEQKDIAWGSQIRSYVFHPYSLAKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + + V+DG++ F+ A L Sbjct: 301 EETGNVNAVMDGNIGQFVTAYLKY 324 >gi|253575894|ref|ZP_04853228.1| peptide chain release factor 2 [Paenibacillus sp. oral taxon 786 str. D14] gi|251844688|gb|EES72702.1| peptide chain release factor 2 [Paenibacillus sp. oral taxon 786 str. D14] Length = 342 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 169/336 (50%), Positives = 230/336 (68%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ K P W + +A+ ++ E + +++ +Q+ + ++ ELA E Sbjct: 2 KQEMIANYEEKMAAPDFWDDNEKAQGIIAEMNAVKSSVDQYTALQNEYDELEMMAELAEE 61 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D S+ E +D+++++ ++E + + LL+ D +A LE+H GAGGTESQDW MLL Sbjct: 62 EGDESLAAEVADSVEKLVKKLEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLL 121 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTRWAEKR FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+D+ Sbjct: 122 RMYTRWAEKRGFKVETLDYLPGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDA 181 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 + RRHTSF S V P + D +EIEI D +IDTYRASGAGGQH+NTTDSAVRITHIPTG Sbjct: 182 SGRRHTSFVSCDVVPEISDDVEIEIRNEDLKIDTYRASGAGGQHINTTDSAVRITHIPTG 241 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV CQ ERSQ KN+ +A MLR+KLYE ++++++ + +++I WG QIRSYV Sbjct: 242 IVVTCQNERSQIKNRERAMTMLRSKLYERKIEEQQRELDEIRGEQSDIAWGSQIRSYVFH 301 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN+E + V+DGDLD F+ L + Sbjct: 302 PYSMVKDHRTNVETGNVGAVMDGDLDAFIDGYLRSQ 337 >gi|149924687|ref|ZP_01913037.1| peptide chain release factor 2 [Plesiocystis pacifica SIR-1] gi|149814444|gb|EDM74035.1| peptide chain release factor 2 [Plesiocystis pacifica SIR-1] Length = 354 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 167/346 (48%), Positives = 225/346 (65%), Gaps = 2/346 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD+ +RL T DP W++ A+ ++RE+ L + I ++Q + D Sbjct: 4 GGIFDYAGKRERLEEYEIATGDPSFWEDNERAQKILREQSTLKKLVEQIDDVQQTIDDGR 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L EL EE D + E +NL + + +F +LSG D + A L ++AGAGG +S Sbjct: 64 ELYELGREESDTESIVEAWENLGQADALLGKLEFRRMLSGTHDEDSALLSINAGAGGVDS 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMY RW E++ F + L+I +G++AGI+ A L I+G AYGWL+ E GVHRL Sbjct: 124 QDWAEMLLRMYQRWGERQGFDVKVLDIQEGDQAGIRGADLAIEGDYAYGWLRSEIGVHRL 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPV--VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 VRISP+DS +RR TSF+SI V P EIE++ +D R+D YRASGAGGQHVN T+S Sbjct: 184 VRISPFDSQARRQTSFASIMVLPDLGDGKDFEIEVNPADLRVDKYRASGAGGQHVNKTES 243 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+TH PTG+VV CQ ERSQHKN A A ML+AKL++LE Q+R + + E K I W Sbjct: 244 AVRLTHEPTGIVVACQMERSQHKNMATAMRMLKAKLWDLEQQRRSDEISALEGDKKAIEW 303 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 G QIRSYV+ PYQ V D RT +++ + VLDGDL +M+A L ++ Sbjct: 304 GSQIRSYVIHPYQQVNDHRTELKQGNVDAVLDGDLGSYMEAFLLMQ 349 >gi|309804632|ref|ZP_07698697.1| peptide chain release factor 2 [Lactobacillus iners LactinV 09V1-c] gi|308166024|gb|EFO68242.1| peptide chain release factor 2 [Lactobacillus iners LactinV 09V1-c] Length = 359 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 154/351 (43%), Positives = 220/351 (62%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + LGGLFD+DN + ++ K D W + A+ ++ ++ + + + Sbjct: 1 MKNNCHILGGLFDFDNLKESIAINEQKMADDTFWNDQTNAQKIIEATNYMREKVDKYQTL 60 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D +EL E + +L E + ++++K E + LLSG+ D ++A LE+H Sbjct: 61 SAALADAKTAVELYNMEPENDMLMEITAEVEKLKNEFNNYELHLLLSGKYDDHNALLEIH 120 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTE+ DWANML RMY RW + E + G+EAG+KS ++ ++G NA+G LK Sbjct: 121 SGAGGTEAMDWANMLFRMYQRWCDSHNLTFEVDDFQVGDEAGLKSVSVRVQGNNAFGLLK 180 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DS RRHTSF+S+ V P +D SI IEI+ D RID YR+SGAGGQH Sbjct: 181 SENGVHRLVRISPFDSAKRRHTSFASVEVIPEIDKSINIEINPDDLRIDVYRSSGAGGQH 240 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T SAVRITH+PTG+V Q +RSQ +N+ A +MLRAKL++LE K+ + + + Sbjct: 241 INKTSSAVRITHLPTGIVTSSQAQRSQFQNRETAMDMLRAKLFKLEEDKKRKQTEALKGN 300 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + EI +G QIRSYV PY MVKD RT+ E + V++G+LD F+ A L Sbjct: 301 QKEINFGSQIRSYVFHPYNMVKDHRTDYETSDTIGVMNGNLDPFIYAYLQW 351 >gi|290968807|ref|ZP_06560344.1| peptide chain release factor 2 [Megasphaera genomosp. type_1 str. 28L] gi|290781103|gb|EFD93694.1| peptide chain release factor 2 [Megasphaera genomosp. type_1 str. 28L] Length = 352 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 152/337 (45%), Positives = 221/337 (65%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 +R+ L+ + DP W + A+ + +E L + + + +++ D LELA+E Sbjct: 4 KEERIMDLDIQMSDPDFWNHPDTARRISQEATALKEEVQGHRALMEQVADLREYLELAME 63 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D S+ + + + EVE ++ LLSGE D +A + HAGAGGTE+QDW ML+ Sbjct: 64 EKDTSLTADIEKQYEALAGEVEKREIRLLLSGEYDRCNAIVTFHAGAGGTEAQDWTQMLI 123 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTRWAE+ + +++ G+EAG+KSAT + G AYG+LK E+GVHRLVRISP+D+ Sbjct: 124 RMYTRWAERNGYVMRLMDLQPGDEAGVKSATFSVDGEYAYGYLKSEKGVHRLVRISPFDA 183 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 +RRHTSF+++ V P + D ++++I+ + R+D +RASGAGGQHVN T SAVR+TH+PTG Sbjct: 184 AARRHTSFTAVDVMPELPDDVDVKINMDEVRVDYFRASGAGGQHVNKTSSAVRMTHLPTG 243 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VVQCQ ERSQ +NK LRAKL+ELE +K+ ++ + I WG QIRSYV Sbjct: 244 IVVQCQNERSQLQNKEMCLKYLRAKLFELEEEKKAQLKAEIGGTHQAIEWGSQIRSYVFH 303 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 PY +VKD RT++E + V+DG+LD F++ L +K Sbjct: 304 PYNLVKDHRTDVETGNTQAVMDGELDKFIEGFLQREK 340 >gi|307265609|ref|ZP_07547163.1| peptide chain release factor 2 [Thermoanaerobacter wiegelii Rt8.B1] gi|306919407|gb|EFN49627.1| peptide chain release factor 2 [Thermoanaerobacter wiegelii Rt8.B1] Length = 330 Score = 259 bits (662), Expect = 4e-67, Method: Composition-based stats. Identities = 161/325 (49%), Positives = 223/325 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W ++ +++ L ++++ L + + + D L+EL LEE D SI E Sbjct: 1 MSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLNTLIELGLEEGDESITDEVD 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +K ++E + ++LL+G D N+A L +HAG+GGTE+QDWA MLLRMYTRWA + Sbjct: 61 KEYKELKKKLEDLKIKTLLNGPYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ E ++ GEEAGIKS TL+IKGP AYG+LK E GVHRLVRISP+D+ RRHTSF+ + Sbjct: 121 FEVETIDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ IE+EI D +IDTYRASGAGGQ+VN T+SAVRITH+PTG+VV CQ ERSQ Sbjct: 181 EVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A ML+AKL +L +++++E + E WG QIRSYV QPY +VKD RTN Sbjct: 241 IQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E+ + + V+DG++D F+ A L K Sbjct: 301 YEEGNVNAVMDGEIDGFINAYLKQK 325 >gi|256848105|ref|ZP_05553549.1| peptide chain release factor 2 [Lactobacillus coleohominis 101-4-CHN] gi|256715165|gb|EEU30142.1| peptide chain release factor 2 [Lactobacillus coleohominis 101-4-CHN] Length = 332 Score = 259 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 160/325 (49%), Positives = 214/325 (65%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + +A+ L+ + L ++D+L D +EL E D + +E Sbjct: 1 MTAPDFWNDSEQAQKLINDNNQLKERRDTFTNLRDQLADLATSVELLKEMPDDDLQKELD 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L +++ ++E + LLSG D+N+A LE+H GAGGTE+QDW MLLRMY RWA++ Sbjct: 61 QKLPQVEKQLEQYRLSQLLSGPYDANNAILEIHPGAGGTEAQDWGEMLLRMYLRWADQHS 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E GEEAGIKS TLLIKG NA+G+L E+GVHRLVRISP+D+ RRHTSF+S+ Sbjct: 121 FDVETAAYEAGEEAGIKSVTLLIKGHNAFGYLHPEKGVHRLVRISPFDAAGRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D+S+E++I SD R+DT+R+SGAGGQH+N T+SAVRITH+PTG+V Q ERSQ Sbjct: 181 DVMPELDESVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHLPTGIVTSSQAERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A NML++KLYELE +K+ + E + EIGWG QIRSYV PY +VKD RT Sbjct: 241 LQNRVTAMNMLKSKLYELEQEKQAKQRAELEGEQLEIGWGSQIRSYVFHPYTLVKDNRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 301 YETHDGQSVMDGDLDPFINAYLQWQ 325 >gi|296169215|ref|ZP_06850868.1| peptide chain release factor RF2 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896113|gb|EFG75780.1| peptide chain release factor RF2 [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 368 Score = 259 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 167/354 (47%), Positives = 223/354 (62%), Gaps = 5/354 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R+ L + DP LW + A+ + + H + I+E+ Sbjct: 12 LDSTLTTVERVLDVDGLRSRIEKLEHEASDPQLWDDQSNAQRVTSQLSHAQGELRRIEEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L ELA EED L E L+ ++ ++E + +LLSGE D +A + + Sbjct: 72 RQRLDDLPVLYELAAEEDAADALAEADAELKALRADIEATEVRTLLSGEYDEREALVTIR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ DWA ML+RMY RWAE+ K+ E + EEAGIKSAT + P AYG L Sbjct: 132 SGAGGVDAADWAEMLMRMYLRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ SRR TSF+ + V PVVD + I+I E D R+D YR+SG GGQ Sbjct: 192 VEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVDTTDHIDIPEGDVRVDVYRSSGPGGQS 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL E +KR E ++ Sbjct: 252 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKISAMRVLQAKLLE---RKRSEERAELDAL 308 Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K E G WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F++A + + Sbjct: 309 KGEGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWR 362 >gi|225375950|ref|ZP_03753171.1| hypothetical protein ROSEINA2194_01587 [Roseburia inulinivorans DSM 16841] gi|225212203|gb|EEG94557.1| hypothetical protein ROSEINA2194_01587 [Roseburia inulinivorans DSM 16841] Length = 338 Score = 259 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 157/324 (48%), Positives = 219/324 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ED W + + ++ M+ + + + ++ +++ + D L+E+ EE+D S++ E Sbjct: 1 MEDGDFWNDPVVSQNKMKTLKSMKDDVATYEKLATQFDDIETLIEMGYEENDASLIPEIE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + + ++LLSGE D ++A L +HAGAGGTES DWA ML RMY++WA+ R Sbjct: 61 EMLNEFVTTFDNIRIKTLLSGEYDGDNAILSLHAGAGGTESCDWAQMLFRMYSKWADSRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 ++ L+ DG+EAGIKS T I G NAYG+LK E+GVHRLVRISP+++ +R TSF S Sbjct: 121 YELVVLDSLDGDEAGIKSITFQINGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ ++IEI+E D RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQ Sbjct: 181 DVMPDIEEDLDIEINEDDLRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H+NK +A ML+AKLY L+ Q+ E A TEIGWG QIRSYV+QPY MVKD RT Sbjct: 241 HQNKDKAMQMLKAKLYLLKEQENAEKAAGIRGEVTEIGWGNQIRSYVMQPYTMVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 +E + V+DG +D F+ L Sbjct: 301 VETGNVDSVMDGKIDLFINGYLKW 324 >gi|319891756|ref|YP_004148631.1| Peptide chain release factor 2 [Staphylococcus pseudintermedius HKU10-03] gi|317161452|gb|ADV04995.1| Peptide chain release factor 2 [Staphylococcus pseudintermedius HKU10-03] gi|323465075|gb|ADX77228.1| peptide chain release factor 2 [Staphylococcus pseudintermedius ED99] Length = 329 Score = 259 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 156/327 (47%), Positives = 220/327 (67%), Gaps = 1/327 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 DP W N A+ ++ + + + ++ E+ + L + + EL EE D + + Sbjct: 1 MMADPQFWDNQERAQTIIDQNNAIKSVVNNYYEVAETLEEMIATYELLQEEYDDEMKDDL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + + +V+ + + LL GE D+N+A LE+H GAGGTESQDW NMLLRMY R+ E++ Sbjct: 61 EQEVIGFQTKVDQFELQLLLDGEHDANNAILELHPGAGGTESQDWTNMLLRMYQRYCEQQ 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E ++ G+EAG+KS T+L+KG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 GFKVEIVDYQAGDEAGVKSVTMLVKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180 Query: 209 IWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P ++ IE+EI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ER Sbjct: 181 CDVIPEFNNEKIEVEINSDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KN+ A ML+AKLY+LEL+++E+ + +IGWG QIRSYV PY MVKD R Sbjct: 241 SQIKNREAAMKMLKAKLYQLELEQKEQELAAIRGEQKDIGWGSQIRSYVFHPYSMVKDHR 300 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354 TN E + + V+DG++ F++A L + Sbjct: 301 TNEETGNVNAVMDGEIGPFIEAYLRHQ 327 >gi|315221796|ref|ZP_07863708.1| peptide chain release factor 2 [Streptococcus anginosus F0211] gi|315189029|gb|EFU22732.1| peptide chain release factor 2 [Streptococcus anginosus F0211] Length = 325 Score = 259 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 147/325 (45%), Positives = 203/325 (62%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L +++ D ++ ILL+ E+D E Sbjct: 1 MTEPDFWDDNIAAQKTSQELNELKQTYDNFQQMADLFDESEILLDFLAEDDSVQEELEEK 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 K + + LLS D+N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 61 LAELETK--MTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAHG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GP+AYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEIE+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG+V Q +R+Q Sbjct: 179 EVMPELDDTIEIEVRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A +L+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT Sbjct: 239 YGNRDRAMKLLQAKLYQMEQEKKAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTG 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGD+D F+ A L + Sbjct: 299 FEVAQVDKVMDGDIDGFIDAYLKWR 323 >gi|15902709|ref|NP_358259.1| peptide chain release factor 2 [Streptococcus pneumoniae R6] gi|116516272|ref|YP_816152.1| peptide chain release factor 2 [Streptococcus pneumoniae D39] gi|182683675|ref|YP_001835422.1| peptide chain release factor 2 [Streptococcus pneumoniae CGSP14] gi|303255830|ref|ZP_07341871.1| peptide chain release factor 2 [Streptococcus pneumoniae BS455] gi|15458252|gb|AAK99469.1| Peptide chain release factor 2 [Streptococcus pneumoniae R6] gi|116076848|gb|ABJ54568.1| peptide chain release factor 2 [Streptococcus pneumoniae D39] gi|182629009|gb|ACB89957.1| peptide chain release factor 2 [Streptococcus pneumoniae CGSP14] gi|302597214|gb|EFL64319.1| peptide chain release factor 2 [Streptococcus pneumoniae BS455] Length = 329 Score = 259 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 149/328 (45%), Positives = 206/328 (62%), Gaps = 2/328 (0%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 K +P W + I A+ + +E L N + ++++ + ILL+ E++ Sbjct: 2 ENKMTEPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHDEL 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 62 VAQLAELD--KIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGN 119 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF Sbjct: 120 AKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSF 179 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+T+IPTG+VVQ + Sbjct: 180 TSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVVQSTVD 239 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 R+Q+ N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD Sbjct: 240 RTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDH 299 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RT+ E V+DGDLD F+ A L + Sbjct: 300 RTSFEVAQVDKVMDGDLDGFIDAYLKWR 327 >gi|319779400|ref|YP_004130313.1| Peptide chain release factor 2 [Taylorella equigenitalis MCE9] gi|317109424|gb|ADU92170.1| Peptide chain release factor 2 [Taylorella equigenitalis MCE9] Length = 327 Score = 259 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 167/325 (51%), Positives = 239/325 (73%), Gaps = 1/325 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 + EDP++W + +A+ L +E++ L++ + + E++ + D+ L LALE++D S L Sbjct: 2 ELEDPNIWNDPEKAQSLSKEKKSLEDVVIVLSELEQSIRDSKDLYTLALEDNDDSTLIAI 61 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++ ++ ++E +F + S AD + ++++ GAGGTE+QDWA+MLLR Y R+ E++ Sbjct: 62 EEDSKKYLEKIEGLEFRRMFSQPADPLNCFIDIQFGAGGTEAQDWASMLLRQYLRYCERK 121 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FKTE LE G+ AGIKSAT+ ++G A+G L+ E GVHRLVR SP+DS + RHTSF+S Sbjct: 122 GFKTEVLEESAGDVAGIKSATIKVEGDYAFGLLRTESGVHRLVRKSPFDSANGRHTSFAS 181 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 ++VYP +DDSIE++I+ +D RIDTYRASGAGGQH+N TDSAVRITH PTG+VVQCQ +RS Sbjct: 182 LYVYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQCQNDRS 241 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QH+NKA+A +ML++KLYELEL+KR E SK+++GWG QIRSYVL +KDLRT Sbjct: 242 QHRNKAEAMSMLKSKLYELELRKRMAEQQKLEESKSDVGWGHQIRSYVLD-QSRIKDLRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353 N+E ++ VLDGDLD F++A+L Sbjct: 301 NVEVSNTQKVLDGDLDMFIEASLKQ 325 >gi|160941606|ref|ZP_02088937.1| hypothetical protein CLOBOL_06506 [Clostridium bolteae ATCC BAA-613] gi|158435500|gb|EDP13267.1| hypothetical protein CLOBOL_06506 [Clostridium bolteae ATCC BAA-613] Length = 339 Score = 259 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 155/324 (47%), Positives = 219/324 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E+P W ++ ++RE ++L + + + ++ + D +++++ EE+D S++ E Sbjct: 1 MEEPGFWDEPEQSTRMVRESKNLKDEVDTYRALEQQYEDIQVMIQMGYEENDSSLIPEIE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L++ K +E + + LLSGE DSN+A L ++AGAGGTES DW ++L RMY RWAE + Sbjct: 61 EMLEQFKETLENMRMKLLLSGEYDSNNAILRLNAGAGGTESCDWCSILYRMYCRWAESKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK L+ DGEEAGIKS T+ I G NAYG+L+ E GVHRLVRISP++S +R TSF S Sbjct: 121 FKAHVLDFLDGEEAGIKSVTVQIDGENAYGYLRSEHGVHRLVRISPFNSAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ I+IE++ D R+DTYR+SGAGGQH+N T SA+RITH PTG+VV CQ ERSQ Sbjct: 181 DVMPNIEEDIDIEVNPDDIRVDTYRSSGAGGQHINKTSSAIRITHFPTGIVVTCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK +A ML+AKL ++ +++ A +IGWG QIRSYVLQPY MVKD RT Sbjct: 241 FQNKEKAMQMLKAKLLMVKQEEQAAKAAGIRGDVKDIGWGSQIRSYVLQPYTMVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + VLDG +D+F+ A L Sbjct: 301 EESGNVDAVLDGAIDNFISAYLRW 324 >gi|295115079|emb|CBL35926.1| bacterial peptide chain release factor 2 (bRF-2) [butyrate-producing bacterium SM4/1] Length = 333 Score = 259 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 153/324 (47%), Positives = 220/324 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E+P W + + LMRE ++L + + ++++ D ++LE+ EE+D S++ E Sbjct: 1 MEEPGFWDDPEMSTRLMREAKNLKDTVESYRKLEQEYEDIQVMLEMGYEENDPSLIPEIQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + ++E + ++LLSGE D+N+A L+++AGAGGTE+ DW +ML RMY RWA+K+ Sbjct: 61 GMMDDFVEKLEAIRIQTLLSGEYDNNNAILKLNAGAGGTEACDWCSMLYRMYQRWADKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F T ++ DGEEAGIKS TL I G NAYG+LK E+GVHRLVRISP++S +R TSF S Sbjct: 121 FTTAVIDYLDGEEAGIKSITLQINGENAYGFLKSERGVHRLVRISPFNSAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + + +++E++ + RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQ Sbjct: 181 DVMPDIKEDLDVEVNPDELRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK A ML+ KLY ++ ++ E + +I +G QIRSYV+QPY +VKD RT Sbjct: 241 FQNKEVAMQMLKTKLYMMKQEEHAEKLSDIRGDVKDINFGNQIRSYVMQPYTLVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + + VLDGD+D F+ A L Sbjct: 301 AESGNVNAVLDGDIDLFISAYLKW 324 >gi|289435770|ref|YP_003465642.1| peptide chain release factor RF-2 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172014|emb|CBH28560.1| peptide chain release factor RF-2 [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 327 Score = 259 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 168/325 (51%), Positives = 215/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP+ W + A+ ++ E +++ I LEL EE D + +E Sbjct: 1 MLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + + + +LS D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ Sbjct: 61 KDITAYMATINAFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+ Sbjct: 121 FKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ Sbjct: 181 DVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML+ KLY+ E +++E + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNRDQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLDDF+ A L + Sbjct: 301 YETGNIQAVMDGDLDDFINAYLRSR 325 >gi|83589099|ref|YP_429108.1| peptide chain release factor 2 [Moorella thermoacetica ATCC 39073] gi|83572013|gb|ABC18565.1| bacterial peptide chain release factor 2 (bRF-2) [Moorella thermoacetica ATCC 39073] Length = 330 Score = 259 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 157/326 (48%), Positives = 222/326 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W++ A+ + + +L ++ +E++ + D L +LAL EDD S+ +E + Sbjct: 1 MLAPGFWEDRARAEAVGKRLTYLKEKLARYRELESKCADVRELWQLALAEDDHSLEEEIA 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +L ++ +VE + +LL+G D ++A L +H GAGGTESQDWA MLLRMY RW E R Sbjct: 61 RDLAAVEGKVEGQLLATLLNGPYDRHNAILSLHPGAGGTESQDWAAMLLRMYNRWCEDRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 ++ E L+ +GEEAG+KSAT+L+KG NAYG+L+ E+GVHRLVRISP+D+ RRHTSF+S+ Sbjct: 121 YQVELLDYLEGEEAGLKSATILVKGENAYGYLQAEKGVHRLVRISPFDAAGRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P V+ E+EI+ D +IDT+R+ GAGGQHVN TDSAVRITH+PTG+VV CQ ERSQ Sbjct: 181 DVIPEVEADEEVEINPDDLKIDTFRSQGAGGQHVNKTDSAVRITHLPTGIVVTCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H N+ A +L+A+L L+ Q++E + EI WG QIRSYV PY +VKD RT Sbjct: 241 HANRLSAMKILQARLAALKRQEQEAELAQIRGEQREIAWGSQIRSYVFHPYSLVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355 +E + V+DG +D F++A L ++ Sbjct: 301 VETGNIQAVMDGQIDPFIQAYLHWQR 326 >gi|291453772|ref|ZP_06593162.1| peptide chain release factor 2 [Streptomyces albus J1074] gi|291356721|gb|EFE83623.1| peptide chain release factor 2 [Streptomyces albus J1074] Length = 371 Score = 259 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 156/353 (44%), Positives = 216/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLDRLRAEIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L ELA EDD E L ++ ++ + +LLSGE D+ +A + + Sbjct: 73 RSRLDDLGVLFELAEAEDDADTRAEAESELASVRKALDEMEVRTLLSGEYDAREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+R +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAVQAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ + + + Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMDALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEEEMGNPEAVFNGEIDGFLEAGIRWRK 364 >gi|25010633|ref|NP_735028.1| peptide chain release factor 2 [Streptococcus agalactiae NEM316] gi|23094987|emb|CAD46208.1| Unknown [Streptococcus agalactiae NEM316] gi|319744591|gb|EFV96943.1| peptide chain release factor RF2 [Streptococcus agalactiae ATCC 13813] Length = 337 Score = 259 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 149/336 (44%), Positives = 214/336 (63%), Gaps = 2/336 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L + +P W + I A+ +E L +Q+ + +LLE+ E Sbjct: 1 MEEEIALLENQMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 +D + +E +NL ++ + + LLS D N+A LE+H G+GGTE+QDW ++LL Sbjct: 61 DDS--LKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLL 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTR+ FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS Sbjct: 119 RMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG Sbjct: 179 AKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV +R+Q+ N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV Sbjct: 239 IVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFT 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E V+DG+++ F+ A L + Sbjct: 299 PYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 334 >gi|183603122|ref|ZP_02712622.2| peptide chain release factor 2 [Streptococcus pneumoniae SP195] gi|183573173|gb|EDT93701.1| peptide chain release factor 2 [Streptococcus pneumoniae SP195] Length = 329 Score = 259 bits (661), Expect = 5e-67, Method: Composition-based stats. Identities = 149/328 (45%), Positives = 206/328 (62%), Gaps = 2/328 (0%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 K +P W + I A+ + +E L N + ++++ + ILL+ E++ Sbjct: 2 ENKMTEPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHDEL 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 62 VAQLAELD--KIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGN 119 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF Sbjct: 120 AKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSF 179 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+T+IPTG+VVQ + Sbjct: 180 TSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVVQSTVD 239 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 R+Q+ N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD Sbjct: 240 RTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDH 299 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RT+ E V+DGDLD F+ A L + Sbjct: 300 RTSYEVAQVDKVMDGDLDGFIDAYLKWR 327 >gi|270292341|ref|ZP_06198552.1| peptide chain release factor 2, programmed [Streptococcus sp. M143] gi|270278320|gb|EFA24166.1| peptide chain release factor 2, programmed [Streptococcus sp. M143] Length = 329 Score = 259 bits (661), Expect = 6e-67, Method: Composition-based stats. Identities = 150/328 (45%), Positives = 205/328 (62%), Gaps = 2/328 (0%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 K +P W + I A+ +E L N + +++++ + ILL+ E++ Sbjct: 2 ENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVRDEL 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 62 VEQLTELD--KMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGN 119 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF Sbjct: 120 AKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSF 179 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG VVQ + Sbjct: 180 TSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVD 239 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 R+Q+ N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD Sbjct: 240 RTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDH 299 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RT+ E V+DGDLD F+ A L + Sbjct: 300 RTSFEVAQVDKVMDGDLDGFIDAYLKWR 327 >gi|322376937|ref|ZP_08051430.1| peptide chain release factor 2 [Streptococcus sp. M334] gi|321282744|gb|EFX59751.1| peptide chain release factor 2 [Streptococcus sp. M334] Length = 329 Score = 259 bits (661), Expect = 6e-67, Method: Composition-based stats. Identities = 151/328 (46%), Positives = 206/328 (62%), Gaps = 2/328 (0%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 K +P W + I A+ +E L N + ++++ + ILL+ E++ Sbjct: 2 ENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVQEEL 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 T + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 62 VTQLSELD--KMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGN 119 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF Sbjct: 120 AKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSF 179 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG VVQ + Sbjct: 180 TSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVD 239 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 R+Q+ N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD Sbjct: 240 RTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDH 299 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RT+ E V+DGDLD F+ A L + Sbjct: 300 RTSFEVAQVDKVMDGDLDGFIDAYLKWR 327 >gi|257870245|ref|ZP_05649898.1| peptide chain release factor 2 [Enterococcus gallinarum EG2] gi|257804409|gb|EEV33231.1| peptide chain release factor 2 [Enterococcus gallinarum EG2] Length = 329 Score = 259 bits (661), Expect = 6e-67, Method: Composition-based stats. Identities = 166/325 (51%), Positives = 219/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ ++ E ++ + + +LLE+ EE D + E + Sbjct: 1 MADPTFWDDSEQAQKVINENNANKETYDQFNQLAEEFEELEVLLEMIQEEPDAEMEAELA 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +Q + ++ + LL D N+A +E+H GAGGTESQDW +MLLRMYTR+ E+ Sbjct: 61 ERIQALNEKMGTYELSMLLDEPYDRNNAIIELHPGAGGTESQDWGSMLLRMYTRFCEQHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 ++ E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ Sbjct: 121 YQVETLDYQAGDEAGIKSVTLLIKGHNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D +I+IEI+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ Sbjct: 181 DVMPELDGAIDIEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML+AKLY+LE++K+E+ A + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L +K Sbjct: 301 FETGNVQAVMDGDLDGFIDAYLKLK 325 >gi|153810056|ref|ZP_01962724.1| hypothetical protein RUMOBE_00437 [Ruminococcus obeum ATCC 29174] gi|149834234|gb|EDM89314.1| hypothetical protein RUMOBE_00437 [Ruminococcus obeum ATCC 29174] Length = 335 Score = 258 bits (660), Expect = 6e-67, Method: Composition-based stats. Identities = 153/324 (47%), Positives = 216/324 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P W N ++ M+E + + + + ++ ++ D ++E+ EE+D I+ E Sbjct: 1 MEAPDFWDNAEVSQQKMKELKSMKDDMEIYHSLETQMEDMETMIEMGYEENDPEIIPEIQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + + + ++LLSGE DS +A ++++AGAGGTE+ DW ML RMY+RW +++ Sbjct: 61 EMLDEFQKNFDSIRVKTLLSGEYDSENAIIKLNAGAGGTEACDWCGMLYRMYSRWVDRKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L+ DG+EAG+KS T + G NAYG+LK E+GVHRLVRISP+++ +R TSF S Sbjct: 121 FTMEVLDYLDGDEAGVKSVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + +++EI++ D RIDTYR+SGAGGQH+N T SA+RITH PTG+VVQCQ ERSQ Sbjct: 181 DVMPDIKKDLDVEINDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK +A ML+AKLY L+ Q+ E + T+IGWG QIRSYV+QPY MVKD RT+ Sbjct: 241 HMNKDKAMQMLKAKLYLLKQQEAEAKLSGIRGEVTDIGWGNQIRSYVMQPYTMVKDHRTS 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + VLDGD+D F+ A L Sbjct: 301 EETGNVDAVLDGDIDPFINAYLKW 324 >gi|255283235|ref|ZP_05347790.1| peptide chain release factor 2 [Bryantella formatexigens DSM 14469] gi|255266308|gb|EET59513.1| peptide chain release factor 2 [Bryantella formatexigens DSM 14469] Length = 334 Score = 258 bits (660), Expect = 6e-67, Method: Composition-based stats. Identities = 162/324 (50%), Positives = 218/324 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E+P W + ++ M+ + L + + ++++ + L+E+A EE+D S++ E Sbjct: 1 MEEPDFWDDPESSQESMKTLKALKDDVETYAVLKEQYEEIETLIEMAYEENDASLILEIQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L E + +LLSGE D NDA + +HAGAGGTES DWA ML RMYTRWA+K+ Sbjct: 61 ETLDSFIATFENIRIRTLLSGEYDKNDAIVTLHAGAGGTESCDWAGMLYRMYTRWADKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + E L+ DGEEAGIKS T ++G NAYG+LK E+GVHRLVRISP+++ +R TSF S Sbjct: 121 YTVEVLDYLDGEEAGIKSVTFEVRGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ ++IEI E D RIDTYR+SGAGGQH+N T SAVRITH+PT +VVQCQ ERSQ Sbjct: 181 DVMPDIEEDLDIEIREEDLRIDTYRSSGAGGQHINKTSSAVRITHLPTNIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK +A ML+AKLY L+ Q+ E + EIGWG QIRSYV+QPY MVKD RTN Sbjct: 241 FQNKDKAMQMLKAKLYLLKQQENAEKVSGIRGEVKEIGWGNQIRSYVMQPYTMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + V+DG++D F+ A L Sbjct: 301 AETGNVDSVMDGNIDLFINAYLKW 324 >gi|309777858|ref|ZP_07672804.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium 3_1_53] gi|308914419|gb|EFP60213.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium 3_1_53] Length = 327 Score = 258 bits (660), Expect = 6e-67, Method: Composition-based stats. Identities = 147/324 (45%), Positives = 202/324 (62%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 T W + A+ L+R+ + + + +++ L +L E+ D I + Sbjct: 1 MTLQDDFWSDPQHAQTLIRQLNGIKDIVESYEKLNSALEGLEETHDLLKEDYDDEIFELF 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++ + + + LLS E D + A LE+H GAGGTES DWA+ML RMY+RWAEK+ Sbjct: 61 EAEYMEMEKNFDDFEIKILLSHEYDHSSAILELHPGAGGTESCDWADMLYRMYSRWAEKK 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK L+ GEEAGIKS T L++G AYG+LK E+GVHRLVRISP+DS RRHTSF+S Sbjct: 121 GFKVSVLDYLPGEEAGIKSVTFLVEGDMAYGYLKAEKGVHRLVRISPFDSGGRRHTSFAS 180 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P +D IEIEI D ++T RASGAGGQH+N TDSAVR+ H PTG+V CQ RS Sbjct: 181 LDVMPQFNDEIEIEIKPEDLIVETKRASGAGGQHINKTDSAVRMVHKPTGLVATCQNGRS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QH+N+ +A +L+++LY+ ++++E + + WG QIRSYV PY MVKD RT Sbjct: 241 QHENREEALRVLKSRLYQKMIEEQEAKLAEIKGEQKANEWGSQIRSYVFHPYSMVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352 + E + V+DGDLD F+ A L Sbjct: 301 SCETSDVQGVMDGDLDAFIFAYLK 324 >gi|229823414|ref|ZP_04449483.1| hypothetical protein GCWU000282_00712 [Catonella morbi ATCC 51271] gi|229787189|gb|EEP23303.1| hypothetical protein GCWU000282_00712 [Catonella morbi ATCC 51271] Length = 331 Score = 258 bits (660), Expect = 7e-67, Method: Composition-based stats. Identities = 165/325 (50%), Positives = 224/325 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + +A+ ++ + S I +++ + D + LEL E +D IL E Sbjct: 1 MSAPDFWDDNEKAQKIISQLNLAKETYSTIHALEEGVADIEVALELYDESEDADILAEAE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +++ +++ + + LLSG D+N+A LE+H GAGGTESQDW +MLLRMY RWA+K+ Sbjct: 61 GQVAQVQADLDAYEMKLLLSGPHDANNAILEIHPGAGGTESQDWGSMLLRMYQRWADKQG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK L+ DGEEAGIKS TL I+G NAYG+LK E+GVHRLVRISP+DSNSRRHTSF+S+ Sbjct: 121 FKVTVLDYQDGEEAGIKSVTLEIEGHNAYGYLKSEKGVHRLVRISPFDSNSRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P++DD+IEI+I+ D RIDTYRASGAGGQH+N T SA+RITHIPTG+V Q Q +RSQ Sbjct: 181 EVTPMLDDTIEIDINPDDLRIDTYRASGAGGQHINKTSSAIRITHIPTGIVTQSQSQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A ML+AKLY+LE + + + + + +I WG QIRSYV PY MVKD RT+ Sbjct: 241 FQNRDLAMAMLKAKLYQLEEENKAKELAALKGEQKDIAWGSQIRSYVFHPYAMVKDHRTS 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDL+ F+ A L + Sbjct: 301 YEVGNTGAVMDGDLNGFIDAYLKWQ 325 >gi|16804547|ref|NP_466032.1| peptide chain release factor 2 [Listeria monocytogenes EGD-e] gi|16411997|emb|CAD00587.1| prfB [Listeria monocytogenes EGD-e] Length = 327 Score = 258 bits (660), Expect = 7e-67, Method: Composition-based stats. Identities = 167/325 (51%), Positives = 215/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP+ W + A+ ++ E +++ I LEL EE D + +E Sbjct: 1 MLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +++ + + + +LS D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ Sbjct: 61 KDIKAYMATISAFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+ Sbjct: 121 FKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ Sbjct: 181 DVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML+ KLY+ E +++E + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLDDF+ A L + Sbjct: 301 YETGNIQAVMDGDLDDFINAYLRSR 325 >gi|183603302|ref|ZP_02711260.2| peptide chain release factor 2 [Streptococcus pneumoniae CDC1087-00] gi|183603790|ref|ZP_02721350.2| peptide chain release factor 2 [Streptococcus pneumoniae MLV-016] gi|194397508|ref|YP_002037401.1| peptide chain release factor 2 [Streptococcus pneumoniae G54] gi|225856431|ref|YP_002737942.1| peptide chain release factor 2 [Streptococcus pneumoniae P1031] gi|225858565|ref|YP_002740075.1| peptide chain release factor 2 [Streptococcus pneumoniae 70585] gi|225860729|ref|YP_002742238.1| peptide chain release factor 2 [Streptococcus pneumoniae Taiwan19F-14] gi|298229611|ref|ZP_06963292.1| peptide chain release factor 2 [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255815|ref|ZP_06979401.1| peptide chain release factor 2 [Streptococcus pneumoniae str. Canada MDR_19A] gi|307067358|ref|YP_003876324.1| protein chain release factor B [Streptococcus pneumoniae AP200] gi|183570249|gb|EDT90777.1| peptide chain release factor 2 [Streptococcus pneumoniae CDC1087-00] gi|183578420|gb|EDT98948.1| peptide chain release factor 2 [Streptococcus pneumoniae MLV-016] gi|194357175|gb|ACF55623.1| peptide chain release factor 2 [Streptococcus pneumoniae G54] gi|225721230|gb|ACO17084.1| peptide chain release factor 2 [Streptococcus pneumoniae 70585] gi|225726237|gb|ACO22089.1| peptide chain release factor 2 [Streptococcus pneumoniae P1031] gi|225727373|gb|ACO23224.1| peptide chain release factor 2 [Streptococcus pneumoniae Taiwan19F-14] gi|306408895|gb|ADM84322.1| Protein chain release factor B [Streptococcus pneumoniae AP200] Length = 329 Score = 258 bits (660), Expect = 7e-67, Method: Composition-based stats. Identities = 150/328 (45%), Positives = 204/328 (62%), Gaps = 2/328 (0%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 K +P W + I A+ +E L N + ++++ + ILL+ E++ Sbjct: 2 ENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHDEL 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 62 VAQLAELD--KIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGN 119 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF Sbjct: 120 AKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSF 179 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ + Sbjct: 180 TSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVD 239 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 R+Q+ N+ +A ML+AKLY++E K+ + + K EI WG QIRSYV PY MVKD Sbjct: 240 RTQYGNRDRAMKMLQAKLYQMEQDKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDH 299 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RT+ E V+DGDLD F+ A L + Sbjct: 300 RTSFEVAQVDKVMDGDLDGFIDAYLKWR 327 >gi|290959957|ref|YP_003491139.1| peptide chain release factor 2 [Streptomyces scabiei 87.22] gi|260649483|emb|CBG72598.1| peptide chain release factor 2 [Streptomyces scabiei 87.22] Length = 368 Score = 258 bits (660), Expect = 7e-67, Method: Composition-based stats. Identities = 158/355 (44%), Positives = 223/355 (62%), Gaps = 5/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW N EA+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLDKLRADIAVLEEQAAVPSLWDNPDEAQKITSKLSHLQAEVRKAEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD E L ++ ++ + +LLSGE DS +A + + Sbjct: 73 RGRIDDLGVLFEMAEEEDDPDTRAEAESELASVRKALDEMEVRTLLSGEYDSREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE++ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQKGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL + ++R+E ++ Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLD---RRRQEEQARMDAL 309 Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K + G WG Q+RSYVL PYQMVKDLRT E +P V +G+++ F++A + +K Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEYEVGNPEAVFNGEIEGFLEAGIRWRK 364 >gi|51473471|ref|YP_067228.1| peptide chain release factor 2 [Rickettsia typhi str. Wilmington] gi|51459783|gb|AAU03746.1| peptide chain release factor 2 (RF-2) [Rickettsia typhi str. Wilmington] Length = 340 Score = 258 bits (660), Expect = 7e-67, Method: Composition-based stats. Identities = 173/332 (52%), Positives = 236/332 (71%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL+ L T DP LW N A++L+RE+ +++ ++ ++ D L L +A E+D Sbjct: 2 RLTELEELTADPSLWNNNANAQILLREKTNIEEKLNVFNNLKSNFEDILELEAMAEVEND 61 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 L + + +++ + + E L S E+D N+ +LE++AGAGGTES DWA++++RMY Sbjct: 62 FETLNQIEQDFKKLSIIAAKLETECLFSDESDYNNCFLEINAGAGGTESHDWASIMMRMY 121 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 R+AE+ FKT+ + + +GEE GIKS T+ I G AYGW K E GVHRLVRISP+++ + Sbjct: 122 LRFAERLGFKTQIINMINGEEVGIKSCTIRIIGKRAYGWFKTEAGVHRLVRISPFNAAGK 181 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 R TSF+S WVYP +DD I I I + D RIDT+RASGAGGQHVNTTDSAVRITHIPT V Sbjct: 182 RMTSFASSWVYPEIDDDIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITHIPTNTVT 241 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 QCQ +RSQHKNKAQA ML+AKLY+LE+QKR + + ++KT+ WG QIRSYVLQPYQ Sbjct: 242 QCQSDRSQHKNKAQAMKMLQAKLYKLEMQKRTDSVDKQNANKTDNSWGHQIRSYVLQPYQ 301 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +VKDLRT+ E + VLDG+L++F+ A+LA+ Sbjct: 302 IVKDLRTDYETSDTKGVLDGNLENFVSASLAM 333 >gi|254900353|ref|ZP_05260277.1| peptide chain release factor 2 [Listeria monocytogenes J0161] Length = 327 Score = 258 bits (660), Expect = 8e-67, Method: Composition-based stats. Identities = 167/325 (51%), Positives = 215/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP+ W + A+ ++ E +++ I LEL EE D + +E Sbjct: 1 MLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +++ + + + +LS D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ Sbjct: 61 KDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+ Sbjct: 121 FKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ Sbjct: 181 DVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML+ KLY+ E +++E + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLDDF+ A L + Sbjct: 301 YETGNIQAVMDGDLDDFINAYLRSR 325 >gi|190891331|ref|YP_001977873.1| peptide chain release factor 2 (rf-2) protein [Rhizobium etli CIAT 652] gi|190696610|gb|ACE90695.1| peptide chain release factor 2 (rf-2) protein [Rhizobium etli CIAT 652] Length = 342 Score = 258 bits (660), Expect = 8e-67, Method: Composition-based stats. Identities = 235/328 (71%), Positives = 280/328 (85%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 N K EDP+LW + EA+ LMRERQ LD+ I+ +++++ +L DN+ L+EL EE D +++ Sbjct: 2 NNKAEDPNLWNDAAEAQKLMRERQQLDDGINGVRQLEQQLKDNVELIELGEEEGDGGVVK 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E D L+ +K E +Q E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWAE Sbjct: 62 EAEDALKALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWAE 121 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 +++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSF Sbjct: 122 RQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSF 181 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 SSIWVYPVVDDSI IEI+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VV CQQE Sbjct: 182 SSIWVYPVVDDSINIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVACQQE 241 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQHKN+A+AW MLRA++YE EL+KREE AN +SKT+IGWG QIRSYVLQPYQ+VKDL Sbjct: 242 RSQHKNRAKAWEMLRARMYEAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKDL 301 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RT + T+P DVLDGDL++FM+A LA + Sbjct: 302 RTGVASTAPDDVLDGDLNEFMEAALAHR 329 >gi|291528563|emb|CBK94149.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium rectale M104/1] Length = 330 Score = 258 bits (660), Expect = 8e-67, Method: Composition-based stats. Identities = 152/324 (46%), Positives = 218/324 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P W + +++ M+E + + + ++ +++++ D ++E+ EE+D S++ E Sbjct: 1 MEAPDFWDDPEKSQSKMKELKSMKDDVATYAKLKEQYEDIETMIEMGYEENDESLIPEIQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L + + + ++LLSGE D +A L ++AGAGGTES DWA+ML RMY++WA+K+ Sbjct: 61 QMLDDFESTYDGIRMKTLLSGEYDKCNAILRLNAGAGGTESCDWASMLFRMYSKWADKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L+ DG+EAGIKS T + G NAYG+LK E+GVHRLVRISP+++ +R TSF S Sbjct: 121 FTLEVLDSLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ ++IE+ + D RIDTYR+SGAGGQH+N T SA+RITH P+G+VVQCQ ERSQ Sbjct: 181 DVMPDIEEDLDIEVKDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK +A ML+AKLY L+ ++ EIGWG QIRSYVLQPY MVKD RT+ Sbjct: 241 HMNKDKAMQMLKAKLYLLKQEENAAKEAGIRGEVKEIGWGSQIRSYVLQPYTMVKDHRTD 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 +E + VLDG++D F+ L Sbjct: 301 VETGNADAVLDGNIDIFINGYLKW 324 >gi|167772028|ref|ZP_02444081.1| hypothetical protein ANACOL_03402 [Anaerotruncus colihominis DSM 17241] gi|167665826|gb|EDS09956.1| hypothetical protein ANACOL_03402 [Anaerotruncus colihominis DSM 17241] Length = 374 Score = 258 bits (660), Expect = 8e-67, Method: Composition-based stats. Identities = 156/359 (43%), Positives = 226/359 (62%), Gaps = 7/359 (1%) Query: 2 KLSRQLNCLGGLFD-------WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN 54 +L +L D +D ++L+ L +T P W +V ++ E + Sbjct: 6 ELRLRLEAHRAELDEFAQAIGYDALRRKLAELEEQTTAPGFWNDVERSQKNQLETARVRG 65 Query: 55 AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114 + ++ D L L+ LA EE+D S+ E +++R + ++E ++ +LL+GE D+ Sbjct: 66 KLEACDKLNALYDDTLTLIGLADEENDESVYSEALADVERFESDLETQKLSTLLTGEYDA 125 Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 N+A + HAGAGGTE+QDWA ML RMYTRWAE+ F + L+ DG+EAG+KSA++LI G Sbjct: 126 NNAIMTFHAGAGGTEAQDWAQMLYRMYTRWAERHGFTYKILDYLDGDEAGLKSASILITG 185 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 NAYG+L+ E GVHRLVR+SP+D++ RRHTSF+S+ V P + D +EI+ D ++D +R Sbjct: 186 DNAYGFLRSEAGVHRLVRVSPFDASGRRHTSFASVEVLPELPDDHSVEINPEDIKMDVFR 245 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 +SGAGGQH+N T SAVR+THIPTG+VV CQ ERSQ +N+ ML AKL E++ ++ Sbjct: 246 SSGAGGQHINKTSSAVRLTHIPTGIVVSCQNERSQFQNREMCMKMLTAKLVEIKEREHLA 305 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 N + + +I WG QIRSYV PY + KD RT E + + V+DGDLD F+ A L Sbjct: 306 NINEIKGEQMQIAWGSQIRSYVFMPYTLAKDHRTGFESGNINAVMDGDLDGFINAYLKA 364 >gi|116251510|ref|YP_767348.1| peptide chain release factor 2 [Rhizobium leguminosarum bv. viciae 3841] gi|115256158|emb|CAK07239.1| putative peptide chain release factor 2 (rf-2) [Rhizobium leguminosarum bv. viciae 3841] Length = 342 Score = 258 bits (660), Expect = 8e-67, Method: Composition-based stats. Identities = 237/328 (72%), Positives = 284/328 (86%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 N K EDP+LW + EA+ LMRERQ LD+ I+ +K+++ +L DN+ L+EL EE D S+++ Sbjct: 2 NNKAEDPNLWNDASEAQKLMRERQQLDDGINGVKQLEQQLNDNIELIELGEEEGDQSVVK 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E D L+ +K E +Q E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWAE Sbjct: 62 EAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWAE 121 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 +++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSF Sbjct: 122 RQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSF 181 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 SSIWVYPVVDDSI+IEI+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VVQCQQE Sbjct: 182 SSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQE 241 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQHKN+A+AW+MLRA++YE EL+KRE+ A+ +SKTEIGWG QIRSYVLQPYQMVKDL Sbjct: 242 RSQHKNRAKAWDMLRARMYEAELKKREDAASAEAASKTEIGWGHQIRSYVLQPYQMVKDL 301 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RT + ++P DVLDGDL++FM+A LA + Sbjct: 302 RTGVASSAPDDVLDGDLNEFMEAALAHR 329 >gi|296129092|ref|YP_003636342.1| peptide chain release factor 2 [Cellulomonas flavigena DSM 20109] gi|296020907|gb|ADG74143.1| peptide chain release factor 2 [Cellulomonas flavigena DSM 20109] Length = 371 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 144/354 (40%), Positives = 219/354 (61%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D +++ L+ + P+LW + A+ + + + + + Sbjct: 12 QLRTTLESIETVSDPTALRAKIAELSEQASVPNLWDDPEAAQKVTSALSSAQSELERVDK 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ R+ D L+E+A EEDD L E L I+ ++ + +LL+GE D DA + + Sbjct: 72 LRGRIDDLETLVEMAAEEDDADTLAEAEAELVGIRKDLGELEIRTLLAGEYDVRDAVVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG ++ D+A MLLRMY RWAE+ + T L+ EEAG+KSAT +K P A+G L Sbjct: 132 RAGAGGVDAADFAEMLLRMYLRWAERHGYATSVLDTSYAEEAGLKSATFEVKAPYAFGHL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+++ + +EI ES+ ++D +R+SG GGQ Sbjct: 192 SVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDSVEIPESEIKVDVFRSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L + ++ Sbjct: 252 SVNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLVRQEEERAAKKELAG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVLQPYQMVKDLRT E +P+ V DGD+DDF++A + ++ Sbjct: 312 D-IKASWGDQMRSYVLQPYQMVKDLRTEHEVGNPASVFDGDIDDFIEAGVRWRR 364 >gi|255323776|ref|ZP_05364902.1| peptide chain release factor 2 [Corynebacterium tuberculostearicum SK141] gi|255298956|gb|EET78247.1| peptide chain release factor 2 [Corynebacterium tuberculostearicum SK141] Length = 367 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 152/353 (43%), Positives = 216/353 (61%), Gaps = 4/353 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + R+ L + DP LW + A+ + E + ++ Sbjct: 11 QLETTLTTIEKVMDPEALAARIRELEAQAGDPSLWDDPAHAQKVTSELSAAQAKVRKLES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D ++ EL ++ D L ++ +E + ++LSGE D +A + + Sbjct: 71 LRGRLEDMPVMYEL---AEEEGDTSLADDELDSLESAIESLEVTTMLSGEYDPREAVINI 127 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMYTRWAEK K + +I EEAGIKSAT ++ G YG L Sbjct: 128 RSGAGGVDAADWAEMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQL 187 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + I+I ++D R+D YR+SG GGQ Sbjct: 188 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDHIDIPDNDVRVDVYRSSGPGGQ 247 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + Q+ + + + Sbjct: 248 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEEQAELDALGA 307 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG Q+RSYVL PYQMVKDLRTN E PS VLDGD+D F+++ + + Sbjct: 308 G-GNASWGNQMRSYVLHPYQMVKDLRTNFEVGDPSKVLDGDIDGFLESGIRWR 359 >gi|16801714|ref|NP_471982.1| peptide chain release factor 2 [Listeria innocua Clip11262] gi|16415189|emb|CAC97879.1| prfB [Listeria innocua Clip11262] Length = 327 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 168/325 (51%), Positives = 215/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP+ W + A+ ++ E +++ I LEL EE D + E Sbjct: 1 MLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQAELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +++ + + + +LS D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ Sbjct: 61 KDIKAYVATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+ Sbjct: 121 FKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ Sbjct: 181 DVMPELDDEIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML+ KLY+ E +++E + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLDDF+ A L + Sbjct: 301 YETGNIQAVMDGDLDDFINAYLRSR 325 >gi|239636633|ref|ZP_04677635.1| peptide chain release factor 2 [Staphylococcus warneri L37603] gi|239597988|gb|EEQ80483.1| peptide chain release factor 2 [Staphylococcus warneri L37603] Length = 330 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 161/327 (49%), Positives = 221/327 (67%), Gaps = 1/327 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +P+ W + A+ ++ + L + ++ E+++ + D +EL EE D + QE Sbjct: 1 MMTEPNFWDDQNRAQDIIDKNNALKSMVNGYYELEESVEDMSATVELLQEEFDEDMKQEL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 +N+ K E+++ + + LL G D+N+A LE+H GAGGTESQDW +MLLRMY R+ E+ Sbjct: 61 ENNVVEFKAEIDHFELQLLLDGPYDANNAILELHPGAGGTESQDWVSMLLRMYQRYCEQS 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 GFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180 Query: 209 IWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ER Sbjct: 181 CDVIPDFDNDEIEIEINSDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KN+ A ML++KLY+L+L+++E + EIGWG QIRSYV PY MVKD R Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354 TN E V+DGD+ F++A L + Sbjct: 301 TNEETGKVDAVMDGDIGPFIEAYLRHQ 327 >gi|169630559|ref|YP_001704208.1| peptide chain release factor 2 [Mycobacterium abscessus ATCC 19977] gi|238688912|sp|B1MEU8|RF2_MYCA9 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|169242526|emb|CAM63554.1| Peptide chain release factor 2 (PrfB) [Mycobacterium abscessus] Length = 367 Score = 258 bits (659), Expect = 8e-67, Method: Composition-based stats. Identities = 161/354 (45%), Positives = 224/354 (63%), Gaps = 5/354 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R+ L DP+LW + + + + H + ++E+ Sbjct: 12 LDTTLTTVERVLDVDGLRARIKTLEEAAADPNLWDDQARGQQVTSQLSHAQGELRRVEEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L ELA E +D S++ E +++ ++E + +LLSGE D +A + + Sbjct: 72 RSRLDDLPVLYELAEESEDNSVVAEADAERVKLREDIEAMEVRTLLSGEYDEREAVVTIR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ DWA ML+RMY RWAE K+ E + EEAGIKSAT + P AYG L Sbjct: 132 SGAGGVDAADWAEMLMRMYIRWAEAHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+SG GGQ Sbjct: 192 VEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDIPEGDLRVDVYRSSGPGGQS 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+A+L E +KR+E ++ Sbjct: 252 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQARLLE---RKRQEERAEMDAL 308 Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K + G WG Q+RSYVLQPYQMVKDLRT E +P+ VLDGD+D F++A + + Sbjct: 309 KGDGGSSWGTQMRSYVLQPYQMVKDLRTEYEVGNPAAVLDGDIDGFIEAGIRWR 362 >gi|309810763|ref|ZP_07704570.1| peptide chain release factor 2 [Dermacoccus sp. Ellin185] gi|308435300|gb|EFP59125.1| peptide chain release factor 2 [Dermacoccus sp. Ellin185] Length = 370 Score = 258 bits (659), Expect = 9e-67, Method: Composition-based stats. Identities = 136/353 (38%), Positives = 213/353 (60%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + D + +++ L ++ P LW + A+ + + ++ + Sbjct: 12 LRTTMASVREVLDLEKLKKQIVDLEEQSAAPDLWDDPDAAQKITSALSRANAENDRVENM 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D +L+E+ EE+D L E L++++ V + +LL+GE D +A + + Sbjct: 72 DAAIDDLEVLVEMGTEENDADTLAEAERELKKLQKAVGELEVRTLLNGEFDEREAVVTIR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A ML+RMY RWAE+ + T+ ++ EEAG+KS T + P A+G L Sbjct: 132 AGAGGVDAADFAEMLMRMYLRWAERHGYPTKVMDTSYAEEAGLKSVTFEVNVPYAFGNLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ + IEI E++ +ID +R+SG GGQ Sbjct: 192 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIETTDTIEIPENELKIDVFRSSGPGGQS 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG VV Q E+SQ +N+A A +++++L L+ Q+ + Sbjct: 252 VNTTDSAVRMTHIPTGTVVSMQNEKSQIQNRAAALRVMQSRLLLLKKQEEDAQKKELAGD 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQMVKDLRT E + S V DGD+D F++A + K+ Sbjct: 312 -IKASWGDQMRSYVLHPYQMVKDLRTEYEVGNTSGVFDGDIDGFIEAGIRWKR 363 >gi|257886811|ref|ZP_05666464.1| peptide chain release factor 2 [Enterococcus faecium 1,141,733] gi|257822865|gb|EEV49797.1| peptide chain release factor 2 [Enterococcus faecium 1,141,733] Length = 327 Score = 258 bits (659), Expect = 9e-67, Method: Composition-based stats. Identities = 161/324 (49%), Positives = 218/324 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + A+ ++ E + + L + +++++ EE D + +E Sbjct: 1 MAEPGFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVDMLQEEPDAVMQEEAE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + ++ + LL G D N+A +E+H GAGGTESQDW +MLLRMYTRWAE+ Sbjct: 61 TRINALDEKMNTYELSMLLDGPYDRNNAIVELHPGAGGTESQDWGSMLLRMYTRWAEQHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 ++ E L+ G+EAGIKS TLLIKG NA+G+LK E+GVHRLVRISP+DS RRHTSF S+ Sbjct: 121 YQVETLDYQAGDEAGIKSVTLLIKGHNAFGYLKAEKGVHRLVRISPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D++I+IEI+ D +IDTYRASGAGGQH+N T+SAVRITH+PTG VV Q +RSQ Sbjct: 181 DVMPELDETIDIEINPDDLKIDTYRASGAGGQHINKTESAVRITHLPTGTVVASQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML+AKLY+LE++K+E+ A + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 +E + V+DGDLD F+ L + Sbjct: 301 VETGNVQAVMDGDLDLFIDGYLKM 324 >gi|111023366|ref|YP_706338.1| peptide chain release factor 2 [Rhodococcus jostii RHA1] gi|123339715|sp|Q0S2Q6|RF2_RHOSR RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|110822896|gb|ABG98180.1| peptide chain release factor RF2 [Rhodococcus jostii RHA1] Length = 368 Score = 258 bits (659), Expect = 9e-67, Method: Composition-based stats. Identities = 153/355 (43%), Positives = 223/355 (62%), Gaps = 6/355 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + +R+ L + DP LW + A+ + + H + ++E Sbjct: 11 ELDTTLRTVESVLDVEELRRRIDELEHQAADPELWNDQEHAQQVTSQLSHSQAELRRVEE 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D +L ELA + + + + ++ ++ + +++LSGE D DA + + Sbjct: 71 LRTRLDDMPVLYELAED-EGADAIADADAERHSLREDIAAMEVKTMLSGEYDERDALVNI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMY RWAEK + E + EEAGIKSAT +K P +YG L Sbjct: 130 RSGAGGVDAADWAEMLMRMYVRWAEKHGYGVEVYDTSYAEEAGIKSATFAVKAPYSYGTL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+ + V PVV+ + I+++E+D R+D YR+SG GGQ Sbjct: 190 SVEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIDVNENDVRVDVYRSSGPGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL E+ KR+E ++ Sbjct: 250 SVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLEV---KRKEERAEMDA 306 Query: 302 SKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K + G WG Q+RSYVL PYQMVKDLRT E +PS VLDGD+D F+++ + + Sbjct: 307 LKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVNNPSAVLDGDIDGFLESGIRWR 361 >gi|331003438|ref|ZP_08326937.1| peptide chain release factor 2 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412484|gb|EGG91873.1| peptide chain release factor 2 [Lachnospiraceae oral taxon 107 str. F0167] Length = 337 Score = 258 bits (659), Expect = 9e-67, Method: Composition-based stats. Identities = 156/325 (48%), Positives = 219/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E+P W + E+ ++RE + L + + +++ D +L+E+ EE+D S++ E Sbjct: 1 MEEPTFWDDPKESTKIVREAKQLKDTVEKYNKLKSEYEDIGVLIEMGYEENDESLIPEIE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L+ E++ + +LL+GE D A ++++AGAGGTES DW +ML RMYTRWA K Sbjct: 61 AMLEEFTKEIDALKIATLLTGEYDDASAIMKLNAGAGGTESCDWCSMLYRMYTRWAAKEG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + + L+I DG+EAGIKS TL I G NAYG+L+ E GVHRLVRISP+++ +R TSF S Sbjct: 121 YTVDVLDILDGDEAGIKSVTLQINGLNAYGYLRSEHGVHRLVRISPFNAAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + P +++ ++++I+ D RIDTYR+SGAGGQH+N T SA+RITHIPTGVVVQCQ ERSQ Sbjct: 181 DIMPDIEEDLDVDINPDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGVVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK +A ML+AKL+ L+ Q E + +IGWG QIRSYV+QPY MVKD RT Sbjct: 241 FQNKDKAMQMLKAKLFMLKQQANVEKLSDIRGDVKDIGWGNQIRSYVMQPYTMVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + S V+DGD+D F+ A L + Sbjct: 301 AESGNVSAVMDGDIDKFIIAYLTWQ 325 >gi|220910508|ref|YP_002485819.1| peptide chain release factor 2 [Cyanothece sp. PCC 7425] gi|219867119|gb|ACL47458.1| peptide chain release factor 2 [Cyanothece sp. PCC 7425] Length = 361 Score = 258 bits (659), Expect = 9e-67, Method: Composition-based stats. Identities = 149/344 (43%), Positives = 221/344 (64%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD ++S L P+ W + A++ ++E L + + + Q L D + Sbjct: 12 RTIFDVPALQAKISDLEQVAAQPNFWDDQATAQVTLQELNELKSHLEQLHRWQATLSDAV 71 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LEL E D S+LQE SDNL+++ ++ + E LLSG D N A L ++AGAGGT++ Sbjct: 72 AALELVELEPDESLLQEASDNLKQLDQQLSQWELEQLLSGTYDRNGAVLTINAGAGGTDA 131 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRWAE+ +K E+ +G+EAGIKSATL I G AYG+L+ E+G HRL Sbjct: 132 QDWAEMLLRMYTRWAEQHGYKVHLAELSEGDEAGIKSATLEIDGRYAYGYLRSEKGTHRL 191 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+++N +R TSF+ + V P +D S+++EI + D I T R+ G GGQ+VN ++AV Sbjct: 192 VRISPFNANGKRQTSFAGVEVMPQLDHSVQLEIPDKDLEITTSRSGGKGGQNVNKVETAV 251 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RI H+PTG+ V+C QERSQ +NK +A +L+AKL + +++ + E WG Sbjct: 252 RIVHLPTGLAVRCTQERSQLQNKEKALAILKAKLLIIAQEQKAQEIADIRGDAVEAAWGT 311 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QIR+YV PY++VKD+RT +E + V++G+LD+F++A L + Sbjct: 312 QIRNYVFDPYKLVKDVRTGVETQAIEVVMNGELDEFIQAYLRQE 355 >gi|302671676|ref|YP_003831636.1| peptide chain release factor 2 PrfB [Butyrivibrio proteoclasticus B316] gi|302396149|gb|ADL35054.1| peptide chain release factor 2 PrfB [Butyrivibrio proteoclasticus B316] Length = 380 Score = 258 bits (659), Expect = 9e-67, Method: Composition-based stats. Identities = 155/353 (43%), Positives = 222/353 (62%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L+ + D + + L+ + E+P W N +A ++ +++ + ++ I+ + Sbjct: 14 LKGTLDEVTASLDLGTKKKIIEELSREMEEPGFWDNAEKANKKTKDLKNMQDLVADIERL 73 Query: 63 QDRLCDNLILLELALEE--DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 + D + L+++ E DD + E L + ++E + +LL+ D D L Sbjct: 74 NSQYTDIIDLIDMQNAEGVDDDDMAAEIRSELDEFEEKLENIRISNLLNQPYDKYDVILR 133 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 ++AGAGGTE+ DWA+ML RMYTRWAE++ F TE L++ DG+EAGIKS T I G NAYG Sbjct: 134 LNAGAGGTEACDWASMLYRMYTRWAERKGFTTEVLDLLDGDEAGIKSVTFQISGTNAYGL 193 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E GVHRLVRISP+++ ++R TSF S V P +++ ++IEI+ D RIDTYR+SGAGG Sbjct: 194 LKSEHGVHRLVRISPFNAQAKRQTSFVSCDVMPDIEEDLDIEINPDDLRIDTYRSSGAGG 253 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QH+N T SAVRITHIPTGVVV CQ ERSQ +NK +A ML+AKL+ ++ +++ Sbjct: 254 QHINKTSSAVRITHIPTGVVVACQNERSQFQNKDKAMQMLKAKLFIMKQEEQAAKLAGIR 313 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + WG QIRSYVLQPY MV D RT + ++ VLDG+LD F+ A L Sbjct: 314 GEVMDNAWGSQIRSYVLQPYTMVNDTRTGFKASNADGVLDGELDPFINAYLKW 366 >gi|322372865|ref|ZP_08047401.1| peptide chain release factor 2 [Streptococcus sp. C150] gi|321277907|gb|EFX54976.1| peptide chain release factor 2 [Streptococcus sp. C150] Length = 337 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 150/336 (44%), Positives = 214/336 (63%), Gaps = 2/336 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L + +P W + I A+ +E L +Q+ + L L + Sbjct: 1 MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMQELSDETE--LYLEML 58 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E+D S+ +E + L+++ + + LLS D N+A LE+H G+GGTE+QDWA+MLL Sbjct: 59 EEDSSVQEELEETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLL 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY R+ + FK E L+ G+EAGIKS TL +GPNAYG+LK E GVHRLVRISP+DS Sbjct: 119 RMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSF+S+ V P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIPTG Sbjct: 179 AKRRHTSFTSVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV +R+Q+ N+ +A ML+AKLY++E +K+ E N + K EI WG QIRSYV Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFT 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RT E V+DGD++ F+ A L + Sbjct: 299 PYTMVKDHRTGYEVAQVDKVMDGDIEGFIDAYLKWR 334 >gi|238923127|ref|YP_002936640.1| peptide chain release factor 2 in translation [Eubacterium rectale ATCC 33656] gi|238874799|gb|ACR74506.1| peptide chain release factor 2 in translation [Eubacterium rectale ATCC 33656] Length = 330 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 152/324 (46%), Positives = 218/324 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P W + +++ M+E + + + ++ +++++ D ++E+ EE+D S++ E Sbjct: 1 MEAPDFWDDPEKSQSKMKELKSMKDDVATYAKLKEQYEDIETMIEMGYEENDESLIPEIQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L + + + ++LLSGE D +A L ++AGAGGTES DWA+ML RMY++WA+K+ Sbjct: 61 QMLDDFESTYDGIRMKTLLSGEYDKCNAILRLNAGAGGTESCDWASMLFRMYSKWADKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L+ DG+EAGIKS T + G NAYG+LK E+GVHRLVRISP+++ +R TSF S Sbjct: 121 FTLEVLDSLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ ++IE+ + D RIDTYR+SGAGGQH+N T SA+RITH P+G+VVQCQ ERSQ Sbjct: 181 DVMPDIEEDLDIEVKDEDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK +A ML+AKLY L+ ++ EIGWG QIRSYVLQPY MVKD RT+ Sbjct: 241 HMNKDKAMQMLKAKLYLLKQEENAAKEAGIRGEVKEIGWGSQIRSYVLQPYTMVKDHRTD 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 +E + VLDG++D F+ L Sbjct: 301 VETGNADAVLDGNIDIFINGYLKW 324 >gi|119960719|ref|YP_948373.1| peptide chain release factor 2 [Arthrobacter aurescens TC1] gi|119947578|gb|ABM06489.1| peptide chain release factor 2 [Arthrobacter aurescens TC1] Length = 398 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 140/352 (39%), Positives = 217/352 (61%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + D D ++ L+ + P LW + A+++ H + + + ++ Sbjct: 39 LRATYSSIENVTDVDALKTEIAELSEQAGAPDLWDDPASAQVITSRLSHRQSEVERLSKL 98 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 R+ D +L+EL +E D + E + L I+ + + +LLSGE D +A + + Sbjct: 99 ASRIDDLEVLVELGQDEGDEDSMAEAAKELSSIRKALAELEITTLLSGEYDEREAVVTIR 158 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A ML+RMY RWAE+ + T ++ EEAG+KSAT +K P A+G L Sbjct: 159 AGAGGVDAADFAEMLMRMYLRWAERHGYPTTVMDTSYAEEAGLKSATFEVKAPYAFGTLS 218 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ + IEI +++ R+D +R+SG GGQ Sbjct: 219 VEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDSIEIPDNEIRVDVFRSSGPGGQS 278 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L ++ ++++ Sbjct: 279 VNTTDSAVRLTHIPTGIVVSMQNEKSQLQNRAAAMRVLQSRLLLVKKEQQDAEKKALAGD 338 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + S VLDGD+DDF+ A + + Sbjct: 339 -VKASWGDQMRSYVLNPYQMVKDLRTEHEVGNTSAVLDGDIDDFIDAGIRWR 389 >gi|295109041|emb|CBL22994.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus obeum A2-162] Length = 334 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 151/324 (46%), Positives = 216/324 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P W + ++ M+E + + + + ++ ++ D ++E+ EE+D I+ E Sbjct: 1 MEAPDFWDDAEVSQKKMKELKSMKDDMEIYHSLESQMEDMETMIEMGYEENDPEIIPEIQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + + + ++LLSGE DS +A ++++AGAGGTE+ DW ML RMY+RW +++ Sbjct: 61 EMLDEFEKNFDSIRVKTLLSGEYDSENAIIKLNAGAGGTEACDWCGMLYRMYSRWVDRKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L+ DG+EAGIKS T + G NAYG+LK E+GVHRLVRISP+++ +R TSF S Sbjct: 121 FTMEVLDYLDGDEAGIKSVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + +++EI++ D RIDTYR+SGAGGQH+N T SA+RITH PTG+VVQCQ ERSQ Sbjct: 181 DVMPDIKKDLDVEINDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK +A ML+AKL+ L+ Q+ E + T+IGWG QIRSYV+QPY MVKD RT+ Sbjct: 241 HMNKDKAMQMLKAKLFLLKQQEAEAKLSGIRGEVTDIGWGNQIRSYVMQPYTMVKDHRTS 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + VLDG++D F+ A L Sbjct: 301 EETGNVDAVLDGEIDPFINAYLKW 324 >gi|227545120|ref|ZP_03975169.1| peptide chain release factor RF2 [Lactobacillus reuteri CF48-3A] gi|300909208|ref|ZP_07126669.1| peptide chain release factor RF2 [Lactobacillus reuteri SD2112] gi|227184908|gb|EEI64979.1| peptide chain release factor RF2 [Lactobacillus reuteri CF48-3A] gi|300893073|gb|EFK86432.1| peptide chain release factor RF2 [Lactobacillus reuteri SD2112] Length = 332 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 158/325 (48%), Positives = 211/325 (64%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + +A+ ++ E L ++D++ D LEL E D + ++ Sbjct: 1 MAQPDFWNDNEQAQKVIAENNILKEKRDTFVNLRDQISDLETSLELLAVEPDDDLQKDFE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + +E + LL GE D+ +A LE+H GAGGTE+QDW MLLRMY RW E+ Sbjct: 61 ASFTNTQKALEQYRLTQLLDGEYDAKNAILEIHPGAGGTEAQDWGEMLLRMYIRWGEQHA 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E G+EAGIKS TLLIKG NA+G+L+ E+GVHRLVRISP+D+ RRHTSF+S+ Sbjct: 121 FSVETASYEAGDEAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDAAGRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DDS+E++I SD R+DT+R+SGAGGQH+N T+SAVRITHIPTG+V Q ERSQ Sbjct: 181 DVMPELDDSVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHIPTGIVTSSQAERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A NML++KLYELE +K+ + E + +IGWG QIRSYV PY +VKD RT Sbjct: 241 LQNRVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLDIGWGSQIRSYVFHPYTLVKDNRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L K Sbjct: 301 YETHNGQAVMDGDLDPFIDAFLQWK 325 >gi|15965084|ref|NP_385437.1| peptide chain release factor 2 [Sinorhizobium meliloti 1021] gi|307315054|ref|ZP_07594639.1| peptide chain release factor 2 [Sinorhizobium meliloti BL225C] gi|307317885|ref|ZP_07597323.1| peptide chain release factor 2 [Sinorhizobium meliloti AK83] gi|15074263|emb|CAC45910.1| Probable peptide chain release factor 2 (RF-2) protein [Sinorhizobium meliloti 1021] gi|306896647|gb|EFN27395.1| peptide chain release factor 2 [Sinorhizobium meliloti AK83] gi|306898893|gb|EFN29543.1| peptide chain release factor 2 [Sinorhizobium meliloti BL225C] Length = 342 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 231/328 (70%), Positives = 280/328 (85%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 N K EDP LW + EA+ LMRERQ LD+ I+ ++ + +L DN+ L+EL EE D +I+ Sbjct: 2 NNKAEDPSLWNDAAEAQKLMRERQQLDDGINGLRRFEQQLNDNIELIELGEEEGDSAIVA 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E + L++++ E KQ E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWAE Sbjct: 62 EAEEALRQLRGEAAKKQVEAMLSGEADQNDTYLEVHSGAGGTESQDWANMLLRMYTRWAE 121 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 ++ +K E +EI DGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSF Sbjct: 122 RQGYKVELMEIQDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSF 181 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 SSIWVYPVVD+SI+I+I+ESDCRIDTYR+SGAGGQHVNTTDSAVRITH+P+G+VVQCQQE Sbjct: 182 SSIWVYPVVDESIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHMPSGIVVQCQQE 241 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQHKN+A+AW+MLRA+LYE EL+KREE AN +SKT+IGWG QIRSYVLQPYQ+VKDL Sbjct: 242 RSQHKNRAKAWDMLRARLYEAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKDL 301 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RT +E +SP DVLDG+L++FM+A LA + Sbjct: 302 RTGVESSSPGDVLDGELNEFMEAALAHR 329 >gi|47093711|ref|ZP_00231463.1| peptide chain release factor 2 [Listeria monocytogenes str. 4b H7858] gi|254992782|ref|ZP_05274972.1| peptide chain release factor 2 [Listeria monocytogenes FSL J2-064] gi|47017905|gb|EAL08686.1| peptide chain release factor 2 [Listeria monocytogenes str. 4b H7858] gi|328465115|gb|EGF36383.1| peptide chain release factor 2 [Listeria monocytogenes 1816] Length = 327 Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 167/325 (51%), Positives = 216/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP+ W + A+ ++ E +++ I LEL EE D + +E Sbjct: 1 MLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +++ + + + +LS D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ Sbjct: 61 KDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+ Sbjct: 121 FKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ Sbjct: 181 DVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML+ KLY+ E +++E + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD+F+ A L + Sbjct: 301 YETGNIQAVMDGDLDEFINAYLRSR 325 >gi|296140715|ref|YP_003647958.1| peptide chain release factor 2 [Tsukamurella paurometabola DSM 20162] gi|296028849|gb|ADG79619.1| peptide chain release factor 2 [Tsukamurella paurometabola DSM 20162] Length = 371 Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 155/355 (43%), Positives = 216/355 (60%), Gaps = 4/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D +R+ L K DP LW + A+ + + H + + + ++ Sbjct: 12 LETTLQTVEKVIDLDELRRRVDELEHKASDPELWNDQANAQQVTSQLSHAQSELRRVTDL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY---KQFESLLSGEADSNDAYL 119 + RL D +L ELA E+ + D + +++LSGE D+ DA + Sbjct: 72 RQRLDDLPVLYELAEAEEGDDLAAALEDADADRAKLRGEIEAMEVKTMLSGEYDARDALV 131 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + AGAGG ++ DWA ML+RMY RWAEK + E + EEAG+KSAT IK AYG Sbjct: 132 NIRAGAGGVDAADWAEMLMRMYIRWAEKHGYGVEVYDTSYAEEAGLKSATFAIKTDYAYG 191 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L E G HRLVRISP+D+ RR TSF+ + V PVV+ + I++ E++ R+D YR+SG G Sbjct: 192 TLSVEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIDVDENEVRVDVYRSSGPG 251 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL E + Q+ + Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMKVLQAKLLERKRQEERAQMDAL 311 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 ++++ WG Q+RSYVL PYQMVKDLRTN E +PS VLDGDLD F++A + + Sbjct: 312 KTTEG-ASWGNQMRSYVLHPYQMVKDLRTNYEVNNPSAVLDGDLDGFIEAGIRWR 365 >gi|291523975|emb|CBK89562.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium rectale DSM 17629] Length = 330 Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 152/324 (46%), Positives = 217/324 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P W + +++ M+E + + + ++ +++++ D ++E+ EE+D S++ E Sbjct: 1 MEAPDFWDDPEKSQSKMKELKSMKDDVATYAKLKEQYEDIETMIEMGYEENDESLIPEIQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L + + + ++LLSGE D +A L ++AGAGGTES DWA ML RMY++WA+K+ Sbjct: 61 QMLDDFESTYDGIRMKTLLSGEYDKCNAILRLNAGAGGTESCDWAAMLFRMYSKWADKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L+ DG+EAGIKS T + G NAYG+LK E+GVHRLVRISP+++ +R TSF S Sbjct: 121 FTLEVLDSLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ ++IE+ + D RIDTYR+SGAGGQH+N T SA+RITH P+G+VVQCQ ERSQ Sbjct: 181 DVMPDIEEDLDIEVKDEDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK +A ML+AKLY L+ ++ EIGWG QIRSYVLQPY MVKD RT+ Sbjct: 241 HMNKDKAMQMLKAKLYLLKQEENAAKEAGIRGEVKEIGWGSQIRSYVLQPYTMVKDHRTD 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 +E + VLDG++D F+ L Sbjct: 301 VETGNADAVLDGNIDIFINGYLKW 324 >gi|313847717|emb|CBY16707.1| putative peptide chain release factor 2 [Chlamydophila psittaci RD1] Length = 368 Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 164/358 (45%), Positives = 222/358 (62%), Gaps = 8/358 (2%) Query: 3 LSRQLNCL-------GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA 55 L ++L L G D + Q LS L +T WQ+V A + L Sbjct: 5 LDKRLEGLLTGLALAGRSLDLEGKRQELSILEEQTLKEDFWQDVTSAGKVSERIASLKRQ 64 Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 IS +E + R+ + L D + ++ + + + + LLSGE D N Sbjct: 65 ISHYEEFKVRVDNLAFFLNDGDVSADPELREDLEKEFAICENILSEWETQRLLSGEVDKN 124 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 +L ++AGAGGTES DW ML RMY RWA + ++K E ++ +G+ AGIK T+ G Sbjct: 125 PCFLTINAGAGGTESCDWVEMLFRMYCRWAAQHQWKVEVIDRQEGDVAGIKHVTVKFSGD 184 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 AYG+ K E+GVHRLVRISP+DSN++RHTSF+S+ VYP +DD IEI+I +D RIDT+R+ Sbjct: 185 YAYGYAKAERGVHRLVRISPFDSNAKRHTSFASVDVYPEIDDEIEIDIRPNDLRIDTFRS 244 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVN TDSAVRITHIPTG++V CQ+ERSQ +N+ MLRA++Y+ LQ+R E Sbjct: 245 SGAGGQHVNVTDSAVRITHIPTGIMVSCQRERSQIQNRESCMKMLRARMYQQILQERLEK 304 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 I +K EI WG QIR+YV QPY +VKD+RT E + ++DG+ LDDF+KA LA Sbjct: 305 QLIDRKNKKEIAWGSQIRNYVFQPYTLVKDVRTGHETGNVQAMMDGELLDDFVKAYLA 362 >gi|257877567|ref|ZP_05657220.1| peptide chain release factor 2 [Enterococcus casseliflavus EC20] gi|257811733|gb|EEV40553.1| peptide chain release factor 2 [Enterococcus casseliflavus EC20] Length = 329 Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 162/325 (49%), Positives = 217/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ ++ ++ + L + ++LE+ EE D + E Sbjct: 1 MADPTFWDDSEKAQQVINANNANKETYDQFNQLAEELEELEVMLEMIQEEADPEMEAELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + ++ ++ + LL D N+A +E+H GAGGTESQDW +MLLRMYTR+ E+ Sbjct: 61 ARITKLNEKMASYELSMLLDEPYDRNNAIIELHPGAGGTESQDWGSMLLRMYTRFCEQHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 ++ E L+ G+EAGIKS TLL+KG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ Sbjct: 121 YQVETLDYQAGDEAGIKSVTLLVKGHNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D +I++EI+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ Sbjct: 181 DVMPELDGAIDVEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML+AKLY+LE++K+E+ A + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQLEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L +K Sbjct: 301 FETGNVQAVMDGDLDGFIDAYLKLK 325 >gi|152991276|ref|YP_001356998.1| peptide chain release factor 2 [Nitratiruptor sp. SB155-2] gi|166225114|sp|A6Q582|RF2_NITSB RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|151423137|dbj|BAF70641.1| peptide chain release factor 2 [Nitratiruptor sp. SB155-2] Length = 368 Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 172/353 (48%), Positives = 234/353 (66%), Gaps = 2/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL +++ + + D +RL + P W + +A + +E+ L + +E Sbjct: 12 KLEQKIENIKNIIKPDLITKRLKEIEQLENSPDFWNDAKKAGEIQKEKNRLSRILEKFEE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D L E+A EE+D L + ++ +V + E++LSGE D +A + + Sbjct: 72 ARSSVEDAKDLFEMATEEEDTETLNMLFEEAPTLEEKVNKIEIETMLSGENDDKNAIVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA++L RMY RWAE+ FK E L+ +GEEAGIK + +IKG NAYG+L Sbjct: 132 HPGAGGTESQDWASILYRMYLRWAERHGFKVEVLDYQEGEEAGIKDVSFIIKGENAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HRLVRISP+DSN+RRHTSF+S+ V P VDD I I I + D R+DTYRASGAGGQ Sbjct: 192 KAENGIHRLVRISPFDSNARRHTSFASVMVSPEVDDDINIVIEDKDIRVDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSA+RITHIPTG+VVQCQ +RSQHKN+A A ML+++LYELEL+K+ E Sbjct: 252 HVNKTDSAIRITHIPTGIVVQCQNDRSQHKNRATAMKMLKSRLYELELEKKRAEQEGIE- 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K++IGWG QIRSYVL PYQ VKD R+N ++ +LDGD+D ++ L + Sbjct: 311 -KSDIGWGHQIRSYVLAPYQQVKDTRSNKAYSNVEAILDGDIDKIIEDVLIAE 362 >gi|55821157|ref|YP_139599.1| peptide chain release factor 2 [Streptococcus thermophilus LMG 18311] gi|55823068|ref|YP_141509.1| peptide chain release factor 2 [Streptococcus thermophilus CNRZ1066] gi|116627872|ref|YP_820491.1| peptide chain release factor 2 [Streptococcus thermophilus LMD-9] gi|55737142|gb|AAV60784.1| peptide chain release factor 2 [Streptococcus thermophilus LMG 18311] gi|55739053|gb|AAV62694.1| peptide chain release factor 2 [Streptococcus thermophilus CNRZ1066] gi|116101149|gb|ABJ66295.1| bacterial peptide chain release factor 2 (bRF-2) [Streptococcus thermophilus LMD-9] Length = 337 Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 150/336 (44%), Positives = 213/336 (63%), Gaps = 2/336 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L + +P W + I A+ +E L +++ + L L + Sbjct: 1 MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMKELSDETE--LYLEML 58 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E+D S+ +E + L+++ + + LLS D N+A LE+H G+GGTE+QDWA MLL Sbjct: 59 EEDDSVQEELEETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWAEMLL 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY R+ + FK E L+ G+EAGIKS TL +GPNAYG+LK E GVHRLVRISP+DS Sbjct: 119 RMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSF+S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG Sbjct: 179 AKRRHTSFTSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV +R+Q+ N+ +A ML+AKLY++E +K+ E N + K EI WG QIRSYV Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFT 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RT E V+DGD++ F+ A L + Sbjct: 299 PYTMVKDHRTGYEVAQVDKVMDGDIEGFIDAYLKWR 334 >gi|308071079|ref|YP_003872684.1| peptide chain release factor 2 [Paenibacillus polymyxa E681] gi|305860358|gb|ADM72146.1| Peptide chain release factor 2 (RF-2) [Paenibacillus polymyxa E681] Length = 331 Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 162/325 (49%), Positives = 225/325 (69%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + +A+ ++ E + +++ ++++ D ++ ELA EE D ++ E Sbjct: 1 MAAPDFWDDNDKAQAVIAEMNAVKSSVDSYEQLRLEYEDAGMMAELADEEGDETLAGEIE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++++ + +++ + + LL+ D +A LE+H GAGGTESQDW MLLRMYTRWAEKR Sbjct: 61 NSIRSLLSKLQEFELQLLLNQPYDKLNAILELHPGAGGTESQDWGQMLLRMYTRWAEKRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLAGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + D +++EI D +IDTYRASGAGGQH+NTTDSAVRITH+P+G+VV CQ ERSQ Sbjct: 181 DVVPEIADDVDVEIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPSGIVVTCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA MLR+KLYE +++++ + + +++I WG QIRSYV PY MVKD RT+ Sbjct: 241 IKNREQAMTMLRSKLYERKIEEQRQQLDEIRGEQSDIAWGSQIRSYVFHPYSMVKDHRTS 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DGDLD F+ L + Sbjct: 301 VETGNVGAVMDGDLDPFIDGYLRSQ 325 >gi|328945974|gb|EGG40121.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1087] Length = 325 Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 148/325 (45%), Positives = 204/325 (62%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L ++ + ++ ILL+ E++ E Sbjct: 1 MTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDFMAEDESVQGELEEK 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + LLS D+N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 61 LAELEK--MMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GP+AYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ +R+Q Sbjct: 179 EVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY+LE +K+ + + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|89100645|ref|ZP_01173503.1| peptide chain release factor 2 [Bacillus sp. NRRL B-14911] gi|89084669|gb|EAR63812.1| peptide chain release factor 2 [Bacillus sp. NRRL B-14911] Length = 328 Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 168/325 (51%), Positives = 219/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P+ W + A++++ E L + + ++ + + + EL EE D + E + Sbjct: 1 MLHPNFWDDQKAAQVVISESNALKDQVHEFHDLYETFENLELTYELVKEESDEDLQNELA 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + + + + LLS E D N+A LE+H GAGGTESQDW +MLLRMYTRWAEK+ Sbjct: 61 EELTELTKRLAQFELQLLLSEEYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGIKSVTLAIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D IEI+I D +IDTYRASGAGGQH+NTTDSAVRITH+PT VVV CQ ERSQ Sbjct: 181 EVMPEFNDEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNVVVTCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ +A ML+AKLY+ +++++E+ + EIGWG QIRSYV PY MVKD RT+ Sbjct: 241 IKNRERAMKMLQAKLYQKKIEEQEQELLEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTS 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L + Sbjct: 301 TESGNVQGVMDGDLDPFINAYLRSR 325 >gi|328948955|ref|YP_004366292.1| hypothetical protein Tresu_2126 [Treponema succinifaciens DSM 2489] gi|328449279|gb|AEB14995.1| hypothetical protein Tresu_2126 [Treponema succinifaciens DSM 2489] Length = 381 Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats. Identities = 162/353 (45%), Positives = 226/353 (64%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++ + G D D+ ++++ T P W + +A +M + + L I ++ Sbjct: 15 QLKADVSAVWGRLDVDDINKKIAEKEALTTAPGFWDDNAKATKIMNDIKLLKGRIEPWQD 74 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + R+ D L EL LEE+D SI E + ++ K + E++ +LLS E D ND +L V Sbjct: 75 LVQRVDDLEALYELGLEENDKSIESELKEQYEKAKADYEHQSILNLLSDEVDKNDCFLSV 134 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTE+ DW ML RMY RWAE+ +K E L + E G+KS + I GP YG+ Sbjct: 135 HAGAGGTEACDWTFMLSRMYQRWAERHGYKVEVLSQEEAE-GGLKSINMKISGPYVYGYT 193 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE GVHRLVRISP+D+N+RRHTSF+S++V+PV+DDSIE+ I D R+DTYR+ G GGQ Sbjct: 194 KGEAGVHRLVRISPFDANARRHTSFASVYVFPVLDDSIEVNIDPKDLRVDTYRSGGKGGQ 253 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVR THIPTG+VV C ERSQ N+A A ++L+++LYE ++RE+ + Sbjct: 254 HVNKTESAVRFTHIPTGIVVACDSERSQLMNRASAMSILKSRLYEYYKEEREKENSKFAG 313 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K +I +G QIRSYV QPY MVKD RT + V+DGD+D F+ L+ K Sbjct: 314 EKKDISFGSQIRSYVFQPYTMVKDHRTKYSVGNIQGVMDGDIDGFLDEFLSAK 366 >gi|328949576|ref|YP_004366911.1| hypothetical protein Marky_0036 [Marinithermus hydrothermalis DSM 14884] gi|328449900|gb|AEB10801.1| hypothetical protein Marky_0036 [Marinithermus hydrothermalis DSM 14884] Length = 367 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 145/352 (41%), Positives = 211/352 (59%), Gaps = 5/352 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L+ L G D +RL+ L + DP+LW + A+ + +E + + + + Sbjct: 6 LEARLDALRGYLDIPAKERRLAELEAELNDPNLWNDAERARRISQEAARIRRTVETYRTL 65 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L + L E+ ++ E + ++++ E+LL+ +A L + Sbjct: 66 EADLEGLVELWNELDPEEREALAGEAEEAQKKLEALYH----ETLLTFPHAEKNAILTIQ 121 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTE+ DWA MLLRMY R A++ F E +++ G EAGI A ++++G NAYG L Sbjct: 122 PGAGGTEACDWAEMLLRMYRRLADRLGFSVEVVDVTPGAEAGIDYAQIIVRGENAYGLLS 181 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+D++ RRHTSF+ + V P VDD++E+EI D RID +R+ G GGQ Sbjct: 182 VENGVHRLVRPSPFDASGRRHTSFAGVEVMPEVDDTVEVEIKPEDLRIDVFRSQGHGGQG 241 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRI H+PTG++V CQ RSQHKNK A +L+++L++LE +K++E Sbjct: 242 VNTTDSAVRIVHLPTGIIVTCQNTRSQHKNKEIALKVLKSRLFQLEWKKKQEELAKLRGE 301 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 I WG QIRSYVL VKD RT + + P +VLDGD++DF+ A L K Sbjct: 302 VKPIEWGSQIRSYVLDKQ-YVKDHRTGLMRHDPQNVLDGDIEDFIWAGLEWK 352 >gi|324990937|gb|EGC22872.1| peptide chain release factor RF2 [Streptococcus sanguinis SK353] Length = 325 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 150/325 (46%), Positives = 209/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L ++ + ++ ILL+ +D S+ E Sbjct: 1 MTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDF--LAEDESVQGELE 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L ++ + + LLS D+N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 59 EKLAELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GP+AYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ +R+Q Sbjct: 179 EVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY+LE +K+ + + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|329114780|ref|ZP_08243537.1| Peptide chain release factor 2 [Acetobacter pomorum DM001] gi|326695911|gb|EGE47595.1| Peptide chain release factor 2 [Acetobacter pomorum DM001] Length = 333 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 194/319 (60%), Positives = 245/319 (76%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W + A+ +MRER L N I ++ ++ + D L+ELA E D ++ E L+ + Sbjct: 2 WNDSDAAQKMMRERTLLANQIEGVEALETNVRDTSELIELAEAEGDADLVAEGMATLRDL 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 E + ++ ESLLSGEADSND YLEV+AGAGGTE+QDW MLLRMYTRWAE +K + Sbjct: 62 AEEAKRRETESLLSGEADSNDCYLEVNAGAGGTEAQDWTEMLLRMYTRWAEAHGYKVTLM 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E +GE+AG+KSAT+ + GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPV+ Sbjct: 122 ESSEGEQAGLKSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVI 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DDSIEIEI+++D ++DT+RASGAGGQHVN TDSA+RITH+PTG+VV CQ +RSQH+N+A Sbjct: 182 DDSIEIEINDADLKVDTFRASGAGGQHVNKTDSAIRITHMPTGIVVACQTDRSQHRNRAT 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A MLRA+LYE ELQKRE A E++KT+IGWG QIRSYVL PYQMVKDLRT +E +P Sbjct: 242 AMQMLRARLYEAELQKREAEAAAAEAAKTDIGWGHQIRSYVLAPYQMVKDLRTGVETGNP 301 Query: 336 SDVLDGDLDDFMKATLAIK 354 VLDGDLD FM A LA++ Sbjct: 302 DAVLDGDLDAFMAAALAMR 320 >gi|172041186|ref|YP_001800900.1| peptide chain release factor 2 [Corynebacterium urealyticum DSM 7109] gi|171852490|emb|CAQ05466.1| peptide chain release factor RF-2 [Corynebacterium urealyticum DSM 7109] Length = 377 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 155/358 (43%), Positives = 212/358 (59%), Gaps = 7/358 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R L + DP LW + A+ + E + + I+E+ Sbjct: 12 LEGTLTTIERVLDLDELDWRARELEDQAADPSLWDDPDHAQQVTSELSRVQAKLKKIREL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQ------ETSDNLQRIKLEVEYKQFESLLSGEADSND 116 + RL D +L +A EE + ++ +E + ++LSGE D + Sbjct: 72 RQRLEDLPVLYNMAEEEAAEDPAASEDAVAMAEEERSALRAAIESLEITTMLSGEYDQRE 131 Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 A + + +GAGG ++ DWA MLLRMYTRWAE+ K + +I EEAGIKSAT +I G Sbjct: 132 ALVNIRSGAGGVDAADWAEMLLRMYTRWAEQHGHKVDIYDISYAEEAGIKSATFVIHGDY 191 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 YG L EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IE+ ++D R+D YR+S Sbjct: 192 MYGTLSVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDSIEVPDADVRVDVYRSS 251 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + Q+ + Sbjct: 252 GPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKRQEEKAEM 311 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + + WG Q+RSYVL PYQMVKDLRT E P VLDGDLD ++A + + Sbjct: 312 DALGAG-GNASWGNQMRSYVLHPYQMVKDLRTEYEVGDPQKVLDGDLDGLIEAGIRWR 368 >gi|262037715|ref|ZP_06011157.1| peptide chain release factor 2 [Leptotrichia goodfellowii F0264] gi|261748187|gb|EEY35584.1| peptide chain release factor 2 [Leptotrichia goodfellowii F0264] Length = 348 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 164/349 (46%), Positives = 226/349 (64%), Gaps = 2/349 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + GG+FD D+ ++ + KT +P W N ++ ++E L I ++I Sbjct: 1 MRKSGGIFDLDSLNLKIERIEKKTAEPDFW-NRENSQETLKELNILKKLIEEYEKISGMN 59 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D +++E DD + + + + + LL + DSN+A L ++AGAG Sbjct: 60 EDVSVMIEFIEAGDDSFEKELDDKIDTVTEEI-QNFKTKLLLDEKYDSNNAILTINAGAG 118 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+ DW ML RMY RW+ ++ FK E L+ GEEAGIKS TL IKG AYG+LKGE+G Sbjct: 119 GTEACDWTEMLYRMYDRWSNRKDFKVEVLDSLSGEEAGIKSITLNIKGSYAYGYLKGEKG 178 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+DSN +RHTSF+++ V P +DD +E+ I D ++DTYRASGAGGQHVNTT Sbjct: 179 VHRLVRISPFDSNGKRHTSFTAVNVVPEIDDDVEVNIRPEDLKVDTYRASGAGGQHVNTT 238 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIPT VV CQ+ERSQ KNK A +L+++L+E+EL+KRE+ + ++++I Sbjct: 239 DSAVRITHIPTNTVVTCQKERSQLKNKETAMKILKSRLFEIELEKREKEMENIKGTESKI 298 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG QIRSYV QPY+MVKD RT E+ + V+DGD+D F+ L K Sbjct: 299 EWGSQIRSYVFQPYKMVKDHRTKAEEGNVDKVMDGDIDSFINEYLKFYK 347 >gi|228477420|ref|ZP_04062056.1| peptide chain release factor 2 [Streptococcus salivarius SK126] gi|228250855|gb|EEK10043.1| peptide chain release factor 2 [Streptococcus salivarius SK126] Length = 337 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 151/336 (44%), Positives = 214/336 (63%), Gaps = 2/336 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L + +P W + I A+ +E L +Q+ + L L + Sbjct: 1 MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMQELSDETE--LYLEML 58 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E+D S+ +E + L+++ + + LLS D N+A LE+H G+GGTE+QDWA+MLL Sbjct: 59 EEDDSVQEELEETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLL 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY R+ + FK E L+ G+EAGIKS TL +GPNAYG+LK E GVHRLVRISP+DS Sbjct: 119 RMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSF+S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG Sbjct: 179 AKRRHTSFTSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV +R+Q+ N+ +A ML+AKLY++E +K+ E N + K EI WG QIRSYV Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFT 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RT E V+DGD++ F+ A L + Sbjct: 299 PYTMVKDHRTGYEVAQVDKVMDGDIEGFIDAYLKWR 334 >gi|291522080|emb|CBK80373.1| bacterial peptide chain release factor 2 (bRF-2) [Coprococcus catus GD/7] Length = 336 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 157/325 (48%), Positives = 220/325 (67%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 E+P W N +A M+E ++L + + ++ D LLE+ EE+D S++ E Sbjct: 1 MMEEPGFWDNADKANNSMKELKNLKDTVEEYHRLETAWEDVETLLEMGYEENDASLIPEV 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + + + E+ + ++LLS E D ++A + +HAGAGGTE+ DW +ML RMYTRWAEK Sbjct: 61 QEAMADFEKRFEHLRIKTLLSEEYDGDNAIVTLHAGAGGTEACDWVSMLFRMYTRWAEKH 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 F T L+ DGEEAGIKS T+ I G NAYG++K E+G+HRLVRISP+++ +R TSF+S Sbjct: 121 GFTTTVLDYLDGEEAGIKSVTVEIAGENAYGYMKSEKGIHRLVRISPFNAAGKRQTSFAS 180 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P +++ ++IEI+E D RIDTYR+SGAGGQH+N T SA+RITH+PT +VVQCQ ERS Sbjct: 181 CDVMPDIEEDLDIEINEDDLRIDTYRSSGAGGQHINKTSSAIRITHLPTNIVVQCQNERS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QH NK +A ML+AKLY L+ Q+ +E + + WG QIRSYV+QPY++VKD RT Sbjct: 241 QHMNKDKAMQMLKAKLYLLKQQENQEKLSGIRGEVKDNAWGSQIRSYVMQPYKLVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353 E ++ V+DGD+D F+ A L Sbjct: 301 GAESSNVDAVMDGDIDLFINAYLKW 325 >gi|332686413|ref|YP_004456187.1| peptide chain release factor 2 [Melissococcus plutonius ATCC 35311] gi|332370422|dbj|BAK21378.1| peptide chain release factor 2 [Melissococcus plutonius ATCC 35311] Length = 328 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 160/325 (49%), Positives = 220/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 D + W N +A+ ++ E ++ D L + I+ EL + D +I E Sbjct: 1 MADVNFWNNAKQAQQIINETNREKEKYQQFNQLADELEELEIMYELQQVDFDEAIQTELI 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +++++ +++ + LL+G D N+A +E H GAGGTESQDW +MLLRMY RWAE R Sbjct: 61 QRIKQLEKQLKTYELALLLNGPYDKNNAIVEFHPGAGGTESQDWGSMLLRMYMRWAESRN 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ Sbjct: 121 FQIEVLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + P +D++IEI+I+ D ++DTYRASGAGGQH+N T+SAVRITHIPT VV Q +RSQ Sbjct: 181 DIMPELDETIEIDINPDDLKVDTYRASGAGGQHINKTESAVRITHIPTSTVVSSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA L++KLY+LE++K+ + + + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMKTLKSKLYQLEMEKKAQESAELRGEQLEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DG++D+F+ A L + Sbjct: 301 METGNVQAVMDGEIDNFIDAYLKWQ 325 >gi|219849743|ref|YP_002464176.1| hypothetical protein Cagg_2879 [Chloroflexus aggregans DSM 9485] gi|254790911|sp|B8G607|RF2_CHLAD RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|219544002|gb|ACL25740.1| hypothetical protein Cagg_2879 [Chloroflexus aggregans DSM 9485] Length = 367 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 154/351 (43%), Positives = 219/351 (62%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L G D + L + DP LW A+ LM+ L ++ ++ Sbjct: 12 IRERFANLRGHLDLAAKQAEIEQLEVRASDPELWNTPRVAQELMQRLTRLKEEVALWNDL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 R+ L+ELA +E D S+ + + L+ ++ EV ++ E LLSG D DA+L + Sbjct: 72 DHRMTSLAELIELAEQEGDESLAADLAAELRAVQREVAQRELEILLSGPYDDRDAFLSIQ 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG GGT++QDWA MLLRMYTRWAE+R + +++ +GEEAGIKSAT+ I+GP AYG+ + Sbjct: 132 AGMGGTDAQDWAAMLLRMYTRWAERRGYTVNLIDLSEGEEAGIKSATIEIRGPYAYGYAR 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRL+R+SP+++ R TSF+ + V P VDD+ E+EI D RID +R+ G GGQ Sbjct: 192 AEAGVHRLIRLSPFNAAHTRQTSFARVEVMPEVDDAPEVEIKPEDLRIDVFRSGGHGGQG 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV CQ ERSQ +N+ A +LRA+L E ELQ++ E Sbjct: 252 VNTTDSAVRITHLPTGIVVTCQNERSQIQNRETALRVLRARLLERELQRQAEERARLRGE 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 E +G Q+R+Y L P +VKD RT+ E ++ VLDG++D F++A L Sbjct: 312 YREAAFGNQMRTYYLHPSTLVKDHRTDYETSNVQAVLDGEIDPFIEAFLRA 362 >gi|148543602|ref|YP_001270972.1| peptide chain release factor 2 [Lactobacillus reuteri DSM 20016] gi|184153010|ref|YP_001841351.1| peptide chain release factor 2 [Lactobacillus reuteri JCM 1112] gi|227363435|ref|ZP_03847559.1| peptide chain release factor RF2 [Lactobacillus reuteri MM2-3] gi|325681956|ref|ZP_08161474.1| peptide chain release factor RF2 [Lactobacillus reuteri MM4-1A] gi|148530636|gb|ABQ82635.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus reuteri DSM 20016] gi|183224354|dbj|BAG24871.1| peptide chain release factor 2 [Lactobacillus reuteri JCM 1112] gi|227071535|gb|EEI09834.1| peptide chain release factor RF2 [Lactobacillus reuteri MM2-3] gi|324978600|gb|EGC15549.1| peptide chain release factor RF2 [Lactobacillus reuteri MM4-1A] Length = 332 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 159/325 (48%), Positives = 211/325 (64%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + +A+ ++ E L ++D++ D LEL E D + +E Sbjct: 1 MAQPDFWNDNEQAQKVIAENNILKEKRDTFVNLRDQIGDLETSLELLAVEPDDDLQKEFE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + +E + LL GE D+ +A LE+H GAGGTE+QDW MLLRMY RW E+ Sbjct: 61 ASFTNTQKALEQYRLTQLLDGEYDAKNAILEIHPGAGGTEAQDWGEMLLRMYVRWGEQHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E G+EAGIKS TLLIKG NA+G+L+ E+GVHRLVRISP+D+ RRHTSF+S+ Sbjct: 121 FSVETASYEAGDEAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDAAGRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DDS+E++I SD R+DT+R+SGAGGQH+N T+SAVRITHIPTG+V Q ERSQ Sbjct: 181 DVMPELDDSVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHIPTGIVTSSQAERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A NML++KLYELE +K+ + E + +IGWG QIRSYV PY +VKD RT Sbjct: 241 LQNRVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLDIGWGSQIRSYVFHPYTLVKDNRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L K Sbjct: 301 YETHNGQAVMDGDLDPFIDAFLQWK 325 >gi|269215856|ref|ZP_06159710.1| peptide chain release factor 2 [Slackia exigua ATCC 700122] gi|269130806|gb|EEZ61882.1| peptide chain release factor 2 [Slackia exigua ATCC 700122] Length = 364 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 145/353 (41%), Positives = 213/353 (60%), Gaps = 2/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ +L G + +RL L+ P W + A+ + + + + + Sbjct: 11 ELAERLAAARGYLHIEENERRLHDLDAVISQPGFWDDAQAAQATSKRASDIRSTLDEYRA 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 L D LEL E+D ++ + ++ + ES + +D+ DA + V Sbjct: 71 ACATLEDARAALELIEEDDAFAVEFDELRAGLS--SALDRMEVESWFTDPSDACDAIVSV 128 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 + G+GG E+QDW +ML RMY R+AEK+ +K + L++ GE G+ A + I+G NA+G L Sbjct: 129 NPGSGGLEAQDWTDMLYRMYVRYAEKKGWKVKLLDVVPGEVIGLDRAVVQIEGKNAFGML 188 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVRISP D RR T+F+ + V PVV+D IE+EI+ SD R+D YR+SG GGQ Sbjct: 189 RSEHGVHRLVRISPTDDKKRRQTTFAGVEVLPVVEDDIEVEINPSDVRVDVYRSSGPGGQ 248 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+TH+PTG+VV CQ E+SQ +NK A+ +LRAKLYELE QKRE+ + Sbjct: 249 CVNTTDSAVRLTHLPTGIVVTCQNEKSQLQNKESAFKVLRAKLYELERQKREDEMDALRG 308 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K + +G QIR+YVL PYQ+VKD+R+ +E + VLDG +D+F+ + Sbjct: 309 EKRDNSFGSQIRNYVLYPYQLVKDVRSGVETGNVDAVLDGQIDEFVIGYHRWR 361 >gi|28896314|ref|NP_802664.1| peptide chain release factor 2 [Streptococcus pyogenes SSI-1] gi|28811565|dbj|BAC64497.1| putative peptide chain release factor 2 [Streptococcus pyogenes SSI-1] Length = 337 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 149/336 (44%), Positives = 212/336 (63%), Gaps = 2/336 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L +P W + I A+ +E L +Q+ + +LLE+ E Sbjct: 1 MEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 +D + +E +NL ++ + LLS D N+A LE+H G+GGTE+QDW ++LL Sbjct: 61 DDF--LKEELEENLMQLDKITGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLL 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTR+ FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS Sbjct: 119 RMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG Sbjct: 179 AKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV +R+Q+ N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV Sbjct: 239 IVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFT 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E V+DG+++ F+ A L + Sbjct: 299 PYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 334 >gi|325953656|ref|YP_004237316.1| peptide chain release factor 2 [Weeksella virosa DSM 16922] gi|323436274|gb|ADX66738.1| peptide chain release factor 2 [Weeksella virosa DSM 16922] Length = 366 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 146/351 (41%), Positives = 226/351 (64%), Gaps = 2/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + +++ L + + +++ KT P W + +A+M M+E + + I + + Sbjct: 10 IQKRIQALYTYLEIEQKRIQVTNDEEKTASPDFWDDPKKAEMFMKELRSIKKWIEDYESV 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D +L+E E + +E ++ + +E +F+++LS E D+ A L++ Sbjct: 70 EQAANDLEVLIEFNKEGEV--SDEEVQEHYSKTIKLLENIEFKNMLSDEGDNLGAILQIT 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML+RMY WAE +K L G+ AG+K+ TL I G A+GWLK Sbjct: 128 AGAGGTESCDWASMLMRMYLMWAESHGYKVRELNFQAGDVAGVKTVTLEIDGEFAFGWLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVRISP+DSN++RHTSF S +V P+VD++IEI+I+ +D + T R+ GAGGQ+ Sbjct: 188 GENGVHRLVRISPFDSNAKRHTSFVSAYVSPMVDETIEIDINPADIEMQTSRSGGAGGQN 247 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++ V++TH PTG+VV CQ ERSQ N+ +A ML+++LY++EL K+ N ES+ Sbjct: 248 VNKVETKVQLTHKPTGIVVICQIERSQLANRERAMEMLKSELYKIELDKKMAARNEIESN 307 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K +I WG QIR+YV+ PY++VKD+RT E + V++GD+D F+K+ L + Sbjct: 308 KMKIEWGSQIRNYVMHPYKLVKDVRTGTETGNVDAVMNGDIDQFLKSYLML 358 >gi|322385191|ref|ZP_08058838.1| peptide chain release factor RF2 [Streptococcus cristatus ATCC 51100] gi|321270815|gb|EFX53728.1| peptide chain release factor RF2 [Streptococcus cristatus ATCC 51100] Length = 325 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 149/325 (45%), Positives = 210/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L ++ + ++ ILL+ +D S+ +E Sbjct: 1 MTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDF--LAEDDSVQEELE 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L ++ + + LLS D+N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 59 EKLTELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GP+AYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ +R+Q Sbjct: 179 EVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY+LE +K+ + + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|78044242|ref|YP_359035.1| peptide chain release factor 2 [Carboxydothermus hydrogenoformans Z-2901] gi|77996357|gb|ABB15256.1| peptide chain release factor 2 [Carboxydothermus hydrogenoformans Z-2901] Length = 371 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 152/353 (43%), Positives = 220/353 (62%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++S ++ + D + + L KT +P W N EA+ ++E L + I +E Sbjct: 11 EISPKIEEMRVSLDIPGKKELVEKLTAKTYEPDFWDNYTEAQKTLKELNRLKDDIEKYEE 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + +LL+L EE++ + E D +++ ++ + E LLSG D N A + + Sbjct: 71 LLKAQEELTVLLQLLEEEENEELAVEAQDKAKKLMEKLHRMEIELLLSGPYDKNSAIVSL 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTE+QDW ML RMYTRWAE + +K E ++ GEEAG+KS T ++G AYG+L Sbjct: 131 HAGAGGTEAQDWVEMLYRMYTRWAEDKGYKVELIDRLLGEEAGLKSVTFSVEGFGAYGYL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID-TYRASGAGG 240 K E+GVHRL+RISP+D + RRHTSF+S+ V P V + I + + T+R+ GAGG Sbjct: 191 KAERGVHRLIRISPFDFSGRRHTSFASVDVLPEVAEDIPEIELKEEELKIETFRSGGAGG 250 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVN T+SAVRITH+PTG+ V CQ ERSQ N+A A +L+AKL +LE++K+EE Sbjct: 251 QHVNKTESAVRITHLPTGITVVCQNERSQLMNRALAEKLLKAKLLDLEMKKKEEEMAKLR 310 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + EI WG QIR+YV PY +VKD RT +E V+DG++D F++A L + Sbjct: 311 GEQKEIAWGSQIRTYVFHPYSLVKDHRTGVEVGDVQGVMDGEIDIFIEAYLKM 363 >gi|323351855|ref|ZP_08087506.1| peptide chain release factor RF2 [Streptococcus sanguinis VMC66] gi|322121912|gb|EFX93644.1| peptide chain release factor RF2 [Streptococcus sanguinis VMC66] gi|324993198|gb|EGC25118.1| peptide chain release factor RF2 [Streptococcus sanguinis SK405] gi|324995500|gb|EGC27412.1| peptide chain release factor RF2 [Streptococcus sanguinis SK678] gi|325687821|gb|EGD29841.1| peptide chain release factor RF2 [Streptococcus sanguinis SK72] gi|325689974|gb|EGD31978.1| peptide chain release factor RF2 [Streptococcus sanguinis SK115] gi|325696780|gb|EGD38668.1| peptide chain release factor RF2 [Streptococcus sanguinis SK160] gi|327461467|gb|EGF07798.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1] gi|327469623|gb|EGF15092.1| peptide chain release factor RF2 [Streptococcus sanguinis SK330] gi|327473772|gb|EGF19190.1| peptide chain release factor RF2 [Streptococcus sanguinis SK408] gi|327489322|gb|EGF21115.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1058] gi|332359597|gb|EGJ37415.1| peptide chain release factor RF2 [Streptococcus sanguinis SK49] gi|332361549|gb|EGJ39353.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1056] gi|332362808|gb|EGJ40602.1| peptide chain release factor RF2 [Streptococcus sanguinis SK355] gi|332366326|gb|EGJ44078.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1059] Length = 325 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 150/325 (46%), Positives = 209/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L ++ + ++ ILL+ +D S+ E Sbjct: 1 MTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDF--LAEDESVQGELE 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L ++ + + LLS D+N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 59 EKLAELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GP+AYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ +R+Q Sbjct: 179 EVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY+LE +K+ + + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|224125026|ref|XP_002319484.1| predicted protein [Populus trichocarpa] gi|222857860|gb|EEE95407.1| predicted protein [Populus trichocarpa] Length = 488 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 155/352 (44%), Positives = 226/352 (64%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +++ + + W + RL L+ + P LW + + A + RE L + ++ + Sbjct: 124 IAQSIQVIKRRLQWKKLMVRLDLLSVQLNKPDLWDDPVHAGKISREHGSLMAKMKKVRTL 183 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L +++ +++LA EEDD + E L +++ K+ E+LLSGE DS Y+EV Sbjct: 184 EQELLEHIDMIKLAREEDDNELESEMLKALLQMRRNSNEKEQEALLSGEQDSCPCYIEVQ 243 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA M+++MY WA++ + ++ GE AGIK AT+ + G A+G+ K Sbjct: 244 AGAGGTESMDWAKMVMQMYKSWAQRHGYGVTVVDEMPGEIAGIKRATIKVDGEYAFGYAK 303 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVRISP+DS RRHTSF+++ V P+ D + I+ESD RI+ +RA GAGGQ Sbjct: 304 AEAGVHRLVRISPFDSGKRRHTSFAAVAVIPILRDGFTHVPINESDLRIERFRAGGAGGQ 363 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTT+SAVRI HIPTG+ CQ ERSQH NK A +L+++L + E+ ++ ++ Sbjct: 364 HVNTTESAVRIVHIPTGITATCQNERSQHMNKDSAMAVLQSRLDQREMARQAQMNAYHTQ 423 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 S T+IGWG QIRSYVL PY+MVKDLRTN E T+P VL+G++D F+ + L+ Sbjct: 424 SLTDIGWGNQIRSYVLHPYRMVKDLRTNYEVTNPDSVLEGEIDGFILSYLSA 475 >gi|120402908|ref|YP_952737.1| peptide chain release factor 2 [Mycobacterium vanbaalenii PYR-1] gi|166225112|sp|A1T6D1|RF2_MYCVP RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|119955726|gb|ABM12731.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium vanbaalenii PYR-1] Length = 368 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 163/354 (46%), Positives = 220/354 (62%), Gaps = 5/354 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R+ L DP LW + A+ + + H + I+E+ Sbjct: 12 LDATLTTVERVIDVDGLRGRIEQLEKDASDPQLWDDQARAQKVTSDLSHAQGELRRIEEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L ELA EE + E L +++ ++E + +LLSGE D +A + + Sbjct: 72 RGRLEDLPVLYELAAEEGGSDEVAEADAELTKLREDIEAMEVRTLLSGEYDEREALVTIR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ DWA ML+RMY RWAE+ K+ E + EEAGIKSAT + P AYG L Sbjct: 132 SGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPYAYGNLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ +RR TSF+ + V PV + + IEI E D R+D YR+SG GGQ Sbjct: 192 VEQGTHRLVRISPFDNQNRRQTSFADVEVLPVTETTDHIEIPEGDVRVDVYRSSGPGGQS 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL E +KR E ++ Sbjct: 252 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLE---RKRLEERAEMDAL 308 Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K + G WG Q+RSYVL PYQMVKDLRT E +PS VLDGD+D F++A + + Sbjct: 309 KGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPSAVLDGDIDGFLEAGIRWR 362 >gi|257438202|ref|ZP_05613957.1| peptide chain release factor 2 [Faecalibacterium prausnitzii A2-165] gi|257199279|gb|EEU97563.1| peptide chain release factor 2 [Faecalibacterium prausnitzii A2-165] Length = 373 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 147/347 (42%), Positives = 214/347 (61%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + L D + +R+ L P + + +K + E L ++ +++Q Sbjct: 18 VKDLEEALAIDASRKRVQELEHTMSRPGFYDDAELSKKVFDEVGDLKGKLNRFEKLQGLY 77 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D +L + EE D ++ E + + + V+ Q ++L+GE D ++A L HAG G Sbjct: 78 DDAETMLVMLDEEYDPDMVPEAEEAVNAVGKAVDELQLMTMLNGEYDHSNAILTFHAGTG 137 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWA ML RMY +WA+ E L+ DG+EAG+KSA++++KG NAYG LK E G Sbjct: 138 GTEAQDWAEMLYRMYNKWAQAHGMTVEVLDYQDGDEAGMKSASMMVKGANAYGLLKSENG 197 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR+SP+D+N+RR TSF+S+ V P +D++I+++I D + +R+SGAGGQH+N T Sbjct: 198 VHRLVRVSPFDANARRQTSFASLEVMPELDNTIQVDIRPEDIEMQVFRSSGAGGQHINKT 257 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+ H PTGVVV CQ +RSQ +N+ A ML+AKLY++ Q+ + + + + EI Sbjct: 258 SSAVRLIHKPTGVVVSCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKGVQNEI 317 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYV PY MVKD RTN E + V+DGDLD F+ A L Sbjct: 318 AWGHQIRSYVFMPYTMVKDHRTNYETGNVDAVMDGDLDGFIFAYLKA 364 >gi|41409273|ref|NP_962109.1| peptide chain release factor 2 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398093|gb|AAS05723.1| PrfB [Mycobacterium avium subsp. paratuberculosis K-10] Length = 373 Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats. Identities = 162/356 (45%), Positives = 221/356 (62%), Gaps = 7/356 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R+ L + DP LW + A+ + E H + I+E+ Sbjct: 15 LDSTLTTVERVLDVDGLRARIEKLEHEASDPQLWDDQARAQRVTSELSHAQGELRRIEEL 74 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSGEADSNDAYLE 120 + RL D +L ELA E+ + + + + + ++E + +LLSGE D +A + Sbjct: 75 RARLDDLPVLYELAAEDGEGAAEALAEADAELKALRADIEATEVRTLLSGEYDEREALVT 134 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + +GAGG ++ DWA ML+RMY RWAE+ K+ E + EEAGIKSAT + P AYG Sbjct: 135 IRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGT 194 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+SG GG Sbjct: 195 LSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGG 254 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL E +KR E + Sbjct: 255 QSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKISAMRVLQAKLLE---RKRSEERAELD 311 Query: 301 SSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + K E G WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F++A + + Sbjct: 312 ALKGEGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWR 367 >gi|222085647|ref|YP_002544177.1| peptide chain release factor 2 [Agrobacterium radiobacter K84] gi|221723095|gb|ACM26251.1| peptide chain release factor 2 [Agrobacterium radiobacter K84] Length = 345 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 233/329 (70%), Positives = 283/329 (86%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 LN K+EDP+LW + EA+ LMRERQ LD+ IS ++ ++ ++ DN+ L+EL EE D ++ Sbjct: 4 LNNKSEDPNLWNDATEAQKLMRERQQLDDGISGVRALEQQVADNVELIELGEEEGDADVV 63 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 +E + L+ +K E +Q E++LSGEADSND Y+EVH+GAGGTESQDWANMLLRMYTRWA Sbjct: 64 REAEEALKALKTEAARRQVEAMLSGEADSNDTYVEVHSGAGGTESQDWANMLLRMYTRWA 123 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS Sbjct: 124 ERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 183 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FSSIW+YPVVDDSI+I+I+E DCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VVQCQQ Sbjct: 184 FSSIWIYPVVDDSIQIDINEGDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQ 243 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQHKN+A+AW+MLRA++YE EL KREE AN +SKT+IGWG QIRSYVLQPYQ+VKD Sbjct: 244 ERSQHKNRAKAWDMLRARMYEAELMKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKD 303 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 LRT + T+P DVLDGDL++FM+A LA + Sbjct: 304 LRTGVTSTAPDDVLDGDLNEFMEAALAHR 332 >gi|254831068|ref|ZP_05235723.1| peptide chain release factor 2 [Listeria monocytogenes 10403S] Length = 327 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 168/325 (51%), Positives = 216/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP+ W + A+ ++ E +++ I LEL EE D + +E Sbjct: 1 MLDPNFWNDQQAAQKVINESNVYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +++ + + + +LS D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ Sbjct: 61 KDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+ Sbjct: 121 FKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ Sbjct: 181 DVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML+ KLY+ E +++E + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLDDF+ A L + Sbjct: 301 YETGNIQAVMDGDLDDFINAYLRSR 325 >gi|254776429|ref|ZP_05217945.1| peptide chain release factor 2 [Mycobacterium avium subsp. avium ATCC 25291] Length = 370 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 163/356 (45%), Positives = 221/356 (62%), Gaps = 7/356 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R+ L + DP LW + A+ + E H + I+E+ Sbjct: 12 LDSTLTTVERVLDVDGLRARIEKLEHEASDPQLWDDQARAQRVTSELSHAQGELRRIEEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSGEADSNDAYLE 120 + RL D +L ELA EE + + + + + ++E + +LLSGE D +A + Sbjct: 72 RARLDDLPVLYELAAEEGEGAAEALAEADAELKALRADIEATEVRTLLSGEYDEREALVT 131 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + +GAGG ++ DWA ML+RMY RWAE+ K+ E + EEAGIKSAT + P AYG Sbjct: 132 IRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGT 191 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+SG GG Sbjct: 192 LSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL E +KR E + Sbjct: 252 QSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKISAMRVLQAKLLE---RKRSEERAELD 308 Query: 301 SSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + K E G WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F++A + + Sbjct: 309 ALKGEGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWR 364 >gi|331266735|ref|YP_004326365.1| peptide chain release factor 2 [Streptococcus oralis Uo5] gi|326683407|emb|CBZ01025.1| peptide chain release factor 2 [Streptococcus oralis Uo5] Length = 325 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 152/325 (46%), Positives = 209/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L N + +++++ + ILL+ +D S+ E Sbjct: 1 MTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDF--LAEDESVHDELV 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 59 EQLTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG VVQ +R+Q Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|125717712|ref|YP_001034845.1| peptide chain release factor 2 [Streptococcus sanguinis SK36] gi|125497629|gb|ABN44295.1| Peptide chain release factor 2, putative [Streptococcus sanguinis SK36] Length = 325 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 149/325 (45%), Positives = 208/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L ++ + ++ ILL+ +D + E Sbjct: 1 MTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDF--LAEDELVQGELE 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L ++ + + LLS D+N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 59 EKLAELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GP+AYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ +R+Q Sbjct: 179 EVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY+LE +K+ + + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|251782076|ref|YP_002996378.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390705|dbj|BAH81164.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 331 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 148/328 (45%), Positives = 202/328 (61%), Gaps = 2/328 (0%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 + +P W + I A+ + ++ L + +Q+ + + LE+ E+D Sbjct: 2 EHQMTEPDFWNDNIAAQKISQKLNELKSTYETFHNMQELSDETELYLEMLEEDDSVKDDL 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E S L LS D N+A LE+H G+GGTE+QDWA+ML RMYTR+ Sbjct: 62 EASLETLGQILASYEMTLL--LSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGN 119 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF Sbjct: 120 AKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSF 179 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 S+ V P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV + Sbjct: 180 VSVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVD 239 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 R+Q+ N+ +A ML+AKLY+LE +K+ N + K EI WG QIRSYV PY MVKD Sbjct: 240 RTQYGNRDRAIKMLQAKLYQLEQEKKAAEVNALKGDKKEITWGSQIRSYVFTPYTMVKDH 299 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RTN E V+DGD++ F+ A L + Sbjct: 300 RTNYEVAQVDKVMDGDIEGFIDAYLKWR 327 >gi|227486869|ref|ZP_03917185.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum ATCC 51867] gi|227541969|ref|ZP_03972018.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum ATCC 51866] gi|227092943|gb|EEI28255.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum ATCC 51867] gi|227182412|gb|EEI63384.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum ATCC 51866] Length = 366 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 153/352 (43%), Positives = 218/352 (61%), Gaps = 3/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS L + + D D +R L DP LW + A+ + + H + + ++ + Sbjct: 12 LSDTLTTIEKVLDLDALAERARELELTAADPTLWDDPTNAQKVTSDLSHTQSTLKKVRAL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D ++ EL E++ + D ++ +E + +++LSGE D DA + + Sbjct: 72 RQRVDDLPVMYEL--AEEEGEGTELADDERADLRQAIESMEVQTMLSGEYDERDAVVTIR 129 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ DWA ML+RMY RWAEK K + + EEAGIKSAT + P YG L Sbjct: 130 SGAGGVDAADWAEMLMRMYIRWAEKEGHKVQVFDTSYAEEAGIKSATFQVSDPYMYGTLS 189 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ +RR TSF+ + V PVV+ + I+I +SD R+D YR+SG GGQ Sbjct: 190 VEQGTHRLVRISPFDNQARRQTSFAEVEVLPVVEKTDHIDIPDSDVRVDVYRSSGPGGQS 249 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV CQ E+SQ +N+A A +L+++L E + Q+ + + + Sbjct: 250 VNTTDSAVRITHIPTGIVVTCQNEKSQIQNRASAMAVLQSRLLERKRQEEQAEMDALGAG 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 E WG Q+RSYVL PYQMVKDLRTN E PS VLDGD+D F++A + + Sbjct: 310 -GEASWGNQMRSYVLHPYQMVKDLRTNYEVGDPSKVLDGDIDGFLEAGIRWR 360 >gi|296089769|emb|CBI39588.3| unnamed protein product [Vitis vinifera] Length = 472 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 159/352 (45%), Positives = 231/352 (65%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++ ++ + W V RL L+ + P LW N + A + RE L + +K + Sbjct: 110 IALSIHLIKKRLQWKKLVVRLDVLSAQLNKPDLWDNPVHAGKISREHGMLMGKMKGVKNL 169 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L +++ +++LA EE+D + E+ L ++ + K+ E+LL+G+ DS Y+EV Sbjct: 170 EQELLEHIDMVKLAREENDPELESESLKALLGMRRNSKEKELEALLAGDHDSCSCYIEVQ 229 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA M+++MY WA++R + ++ GE AGIK AT+ + G ++G+ K Sbjct: 230 AGAGGTESMDWAAMVMQMYKMWAQRRGYGVTVVDEMPGETAGIKRATIKVDGEYSFGYAK 289 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVRISP+DS RRHTSF+++ V P+ D S ++I+ESD RI+ +RA GAGGQ Sbjct: 290 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDASSHVQINESDLRIERFRAGGAGGQ 349 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTT+SAVRI HIPTGV CQ ERSQH+NKA A +L+++L +LE+ ++ +I Sbjct: 350 HVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQLEISRQAQINAQHTQ 409 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 S T+I WG QIR+YVL PY+MVKDLRTN E + P VL+GDLD F+ + L+ Sbjct: 410 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSA 461 >gi|148985895|ref|ZP_01818989.1| peptide chain release factor 2 [Streptococcus pneumoniae SP3-BS71] gi|148989834|ref|ZP_01821128.1| peptide chain release factor 2 [Streptococcus pneumoniae SP6-BS73] gi|149007634|ref|ZP_01831251.1| peptide chain release factor 2 [Streptococcus pneumoniae SP18-BS74] gi|149020396|ref|ZP_01835288.1| peptide chain release factor 2 [Streptococcus pneumoniae SP23-BS72] gi|147760789|gb|EDK67760.1| peptide chain release factor 2 [Streptococcus pneumoniae SP18-BS74] gi|147922041|gb|EDK73165.1| peptide chain release factor 2 [Streptococcus pneumoniae SP3-BS71] gi|147924776|gb|EDK75860.1| peptide chain release factor 2 [Streptococcus pneumoniae SP6-BS73] gi|147930698|gb|EDK81680.1| peptide chain release factor 2 [Streptococcus pneumoniae SP23-BS72] gi|301799772|emb|CBW32341.1| peptide chain release factor 2 [Streptococcus pneumoniae OXC141] gi|332077171|gb|EGI87633.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17545] gi|332203909|gb|EGJ17976.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47368] Length = 325 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 149/325 (45%), Positives = 204/325 (62%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L N + ++++ + ILL+ E++ Sbjct: 1 MTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHDELVAQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 61 LAELD--KIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ +R+Q Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|150396182|ref|YP_001326649.1| peptide chain release factor 2 [Sinorhizobium medicae WSM419] gi|150027697|gb|ABR59814.1| peptide chain release factor 2 [Sinorhizobium medicae WSM419] Length = 342 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 231/328 (70%), Positives = 279/328 (85%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 N K EDP LW + EA+ LMRERQ LD+ IS ++ + +L DN+ L+EL EE D +I+ Sbjct: 2 NNKAEDPSLWNDAAEAQKLMRERQQLDDGISGLRRFEQQLNDNIELIELGEEEGDSAIVS 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E + L++++ + KQ E++LSGEAD ND Y+EVH+GAGGTESQDWANMLLRMYTRWAE Sbjct: 62 EAEEALRQLRNDAAKKQVEAMLSGEADQNDTYVEVHSGAGGTESQDWANMLLRMYTRWAE 121 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 ++ +K E +EI DGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSF Sbjct: 122 RQGYKVELMEIQDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSF 181 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 SSIWVYPVVD+SI+++I+ESDCRIDTYR+SGAGGQHVNTTDSAVRITH+P+G+VVQCQQE Sbjct: 182 SSIWVYPVVDESIQVDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHMPSGIVVQCQQE 241 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQHKN+A+AW+MLRA+LYE EL+KREE AN +SKTEIGWG QIRSYVLQPYQ+VKDL Sbjct: 242 RSQHKNRAKAWDMLRARLYEAELKKREEAANAEAASKTEIGWGHQIRSYVLQPYQLVKDL 301 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RT +E TSP DVLDG+L +FM+A LA + Sbjct: 302 RTGVESTSPGDVLDGELSEFMEAALAHR 329 >gi|332654908|ref|ZP_08420650.1| peptide chain release factor 2 [Ruminococcaceae bacterium D16] gi|332516251|gb|EGJ45859.1| peptide chain release factor 2 [Ruminococcaceae bacterium D16] Length = 373 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 158/352 (44%), Positives = 229/352 (65%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ L LG D ++A + L L ++ W N+ +A+ + + + L + + Sbjct: 14 LAPTLEKLGQALDLESAERELDMLQAESAADGFWNNLEKAQKVQQRIKTLQTKVDKHHKR 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D + L E+ E +D S++ E + ++ E+E + ++LL+GE DS++ L +H Sbjct: 74 KQHWDDLMALCEMGNEFEDESLVPELEEGYAALEEEMEEARLQTLLTGEYDSSNVILTIH 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTE+QDWA ML RMYTRW E+ F + ++ DG+EAGIKSAT++I+G NAYG+L+ Sbjct: 134 PGAGGTEAQDWAQMLYRMYTRWTERHGFTYQIMDYQDGDEAGIKSATIMIEGENAYGYLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVR+SP+D+N+RR TSF+S+ V P + + +E+EI D + YRASGAGGQH Sbjct: 194 GEHGVHRLVRVSPFDANARRQTSFASVEVMPDLPEDVEVEIRPEDIEMQVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T SAVR+ H PTG+VV QQERSQ +NK MLRAKL EL++Q++ E + + Sbjct: 254 VNKTSSAVRLIHKPTGIVVASQQERSQFQNKDNCMKMLRAKLVELQMQEKAEKISDLKGV 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +I WG QIRSYV PYQ+VKD RT E ++ V+DG+LD F+ A L + Sbjct: 314 QLKIEWGSQIRSYVFMPYQLVKDNRTAYETSNIGAVMDGELDGFINAYLTAE 365 >gi|228474266|ref|ZP_04059001.1| peptide chain release factor 2 [Staphylococcus hominis SK119] gi|314936947|ref|ZP_07844294.1| peptide chain release factor 2 [Staphylococcus hominis subsp. hominis C80] gi|228271625|gb|EEK12972.1| peptide chain release factor 2 [Staphylococcus hominis SK119] gi|313655566|gb|EFS19311.1| peptide chain release factor 2 [Staphylococcus hominis subsp. hominis C80] Length = 332 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 160/326 (49%), Positives = 218/326 (66%), Gaps = 1/326 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +P W N +A+ ++ + L + ++ E+ +L D EL EE D I ++ Sbjct: 1 MMTEPDFWDNQNKAQDVIDKNNALKSIVNGYYELNHKLEDMDATWELLQEEYDDEIKEDL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++ + +++ + + LL G D+N+A LE+H GAGGTESQDWA+MLLRMY R+ E++ Sbjct: 61 EQDIVSFREQIDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYGEQQ 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 GFKIETIDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180 Query: 209 IWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ER Sbjct: 181 CDVIPEFDNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KN+ A ML++KLY+L+L+++E + EIGWG QIRSYV PY MVKD R Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAI 353 TN E V+DGD+ F++A L Sbjct: 301 TNEETAKVDAVMDGDIAPFIEAYLRQ 326 >gi|289168241|ref|YP_003446510.1| peptide chain release factor 2 [Streptococcus mitis B6] gi|288907808|emb|CBJ22648.1| peptide chain release factor 2 [Streptococcus mitis B6] Length = 325 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 152/325 (46%), Positives = 208/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L N + ++++ + ILL+ +D S+ +E Sbjct: 1 MTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDF--LAEDESVHEELV 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 59 TQLSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG VVQ +R+Q Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|152967725|ref|YP_001363509.1| peptide chain release factor 2 [Kineococcus radiotolerans SRS30216] gi|226726318|sp|A6WEK6|RF2_KINRD RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|151362242|gb|ABS05245.1| peptide chain release factor 2 [Kineococcus radiotolerans SRS30216] Length = 367 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 150/353 (42%), Positives = 220/353 (62%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + D D + L+ LN + P LW + A+ + + + I+++ Sbjct: 12 LRTTYASIREVSDLDALRKELADLNDEAAAPSLWDDPEHAQTVTSRLSAVQAELDRIEKM 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 R+ D +L+EL+ +E D L E L +K ++ + +LLSGE DS +A + + Sbjct: 72 GGRIDDLEVLVELSEDEHDADSLAEAETELNEVKEQLAQLEVRTLLSGEYDSREAIVTIR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A ML+RMY RWAE+R +K+E + EEAGIKSAT + P AYG L Sbjct: 132 SEAGGVDAADFAEMLMRMYLRWAERRGYKSEVYDTSYAEEAGIKSATFKVAAPYAYGTLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV ++ +++ E++ R+D YR+SG GGQ Sbjct: 192 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVAETDHVDVPENEVRVDVYRSSGPGGQS 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ E+SQ +NKA A +L+AKL E + R+ + + Sbjct: 252 VNTTDSAVRLTHLPTGIVVTCQNEKSQLQNKAAAMRVLQAKLLEKARKDRQAELDALKGD 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQMVKDLRTN E + S + DG++D F++A + +K Sbjct: 312 DS-GSWGNQMRSYVLHPYQMVKDLRTNYEVGNTSSIFDGEIDSFLEAGIRWRK 363 >gi|269925864|ref|YP_003322487.1| bacterial peptide chain release factor 2 (bRF- 2) [Thermobaculum terrenum ATCC BAA-798] gi|269789524|gb|ACZ41665.1| bacterial peptide chain release factor 2 (bRF- 2) [Thermobaculum terrenum ATCC BAA-798] Length = 372 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 161/351 (45%), Positives = 224/351 (63%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +++ D +N + L + LW + EA+ +M+ L + + +I Sbjct: 12 LRERISTFKEHLDLENKRLEIEKLEQRAASSELWADPAEAQKVMKNLNDLKDQLEVWSKI 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +LL+LA EED S E + ++ ++ ++ + + E LLSG D DA + +H Sbjct: 72 ERRLEDAEVLLDLAYEEDSASDFHEAASQIRALENQLNHLELELLLSGSYDQEDAIIAIH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A GG ++QDWA+ML+RMY RWA++R ++ E + +GEEAG KSAT+ IKG AYG+ K Sbjct: 132 AREGGIDAQDWASMLVRMYLRWAQRRGWQAELVSSIEGEEAGYKSATIEIKGKYAYGYAK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVR+SP+D RRHTSF+ + V P V+++ E++I E D +IDTYRAS AGGQH Sbjct: 192 AEAGQHRLVRLSPFDQAHRRHTSFALVEVLPDVEETPEVQIREEDLKIDTYRASSAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T SAVRITHIPTG+VV CQ ERSQ +NK A +LRA+L ELEL+++ E + Sbjct: 252 VNKTSSAVRITHIPTGIVVTCQNERSQFQNKETALKILRARLLELELRRQAEEQARLKGE 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 GWG QIRSYVL PY MVKD RT E + VLDG++D F++A L+ Sbjct: 312 HIATGWGSQIRSYVLHPYTMVKDHRTGYEVSDVESVLDGEIDPFIEAYLSQ 362 >gi|223940442|ref|ZP_03632294.1| peptide chain release factor 2 [bacterium Ellin514] gi|223890887|gb|EEF57396.1| peptide chain release factor 2 [bacterium Ellin514] Length = 384 Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats. Identities = 154/354 (43%), Positives = 216/354 (61%), Gaps = 3/354 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+R GG FD N +RL L++ W N +A+ L+ E L + + + Sbjct: 16 LARNWPTYGGFFDVANVQKRLGELDSLMAGESFWSNRDQAQKLIDESNSLRKKVEPLLKA 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETS---DNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + +L D +++ELA E + + L E+E + + L+G D N+ L Sbjct: 76 EKQLEDYKVMIELAEAEPAAEQEKYQNDVDRELVVFNKELENLELKVFLNGPHDKNNCIL 135 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 ++AGAGGTES DWANMLLRMY RWAE R ++ E + GE AGIKSATLLI G NAYG Sbjct: 136 SINAGAGGTESCDWANMLLRMYQRWAELRGWQVEVTDALPGETAGIKSATLLISGENAYG 195 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 + K E+GVHRLVRISP+DSN RRHTSF+S+ +++ EI I ++ +DT+R+ G G Sbjct: 196 FCKAERGVHRLVRISPFDSNKRRHTSFASVDAIAEIEEEGEIAIPPNEFHVDTFRSGGKG 255 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ+VN ++AVRITHIPTG+VV Q +RSQH+N+A A +L ++++ L +++ Sbjct: 256 GQNVNKVETAVRITHIPTGLVVASQTQRSQHQNRATAMKLLLSRIFAQRLDAQKQEMERF 315 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K + WG QIRSYV QPY+MVKDLRT +E + V+DGDLD ++ L Sbjct: 316 YGEKGSVSWGNQIRSYVFQPYRMVKDLRTGVETSDVQGVMDGDLDPYVNGWLRA 369 >gi|260655334|ref|ZP_05860822.1| peptide chain release factor 2 [Jonquetella anthropi E3_33 E1] gi|260629782|gb|EEX47976.1| peptide chain release factor 2 [Jonquetella anthropi E3_33 E1] Length = 348 Score = 257 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 165/349 (47%), Positives = 219/349 (62%), Gaps = 1/349 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + FD + ++ L ++ DP W +AK + + L++++ ++ Sbjct: 1 MRTCRTAFDPEGLRRQADELRLRSSDPAFWS-TGDAKEVSSQLSRLESSLEHWDHLERMF 59 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D + EL +DD + E EVE++Q + LLS DS DA + +HAG+G Sbjct: 60 SDLETMAELLEIDDDPELAAEFDAKSGEYSREVEHRQMDLLLSEAYDSRDAIVTIHAGSG 119 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G +SQDWA ML RMY RW E+ +KT L++ EEAG+KS T + G AYG+LK E G Sbjct: 120 GLDSQDWAEMLYRMYLRWCEENGYKTRLLDLQQDEEAGLKSVTFTVSGSCAYGYLKSETG 179 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+D+N RRHTSFS + V P + D +E+ I + D RIDTYR+SGAGGQHVN T Sbjct: 180 VHRLVRISPFDTNKRRHTSFSGVVVSPQLPDDVEVAIRDEDLRIDTYRSSGAGGQHVNMT 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PTG+VV CQ ERSQH NKA A +LR+KLY+L++Q R + + K E Sbjct: 240 DSAVRITHLPTGIVVSCQNERSQHMNKATAMQVLRSKLYDLQVQNRRQELDDLAGEKKES 299 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG QIRSYVLQPY +VKD RT E + + VLDGDLD F+ A L +K Sbjct: 300 SWGHQIRSYVLQPYTLVKDHRTGEETGNVAAVLDGDLDRFILAYLRWRK 348 >gi|295836903|ref|ZP_06823836.1| peptide chain release factor 2 [Streptomyces sp. SPB74] gi|295826265|gb|EFG64762.1| peptide chain release factor 2 [Streptomyces sp. SPB74] Length = 371 Score = 257 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 155/353 (43%), Positives = 216/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D + ++ L + P LW + A+ + + HL + + + Sbjct: 13 LSSTMESIEAVLDLGKMREDIASLEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEGL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA +E D +E L ++ ++ + +LLSGE DS +A + + Sbjct: 73 RGRIDDLGVLFELAADEGDADTQEEAEQELAAVRKALDEMEVRTLLSGEYDSREAVVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T + P AYG L Sbjct: 133 AEAGGVDASDFAERLQRMYLRWAERLGYKTELYETSYAEEAGIKSTTFAVHTPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ +E N + Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQEKMNALKGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRK 364 >gi|312862769|ref|ZP_07723009.1| peptide chain release factor 2 [Streptococcus vestibularis F0396] gi|311101629|gb|EFQ59832.1| peptide chain release factor 2 [Streptococcus vestibularis F0396] Length = 337 Score = 257 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 152/336 (45%), Positives = 214/336 (63%), Gaps = 2/336 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L + +P W + I A+ +E L +Q+ + L L + Sbjct: 1 MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMQELSDETE--LYLEML 58 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E+D SI +E + L+++ + + LLS D N+A LE+H G+GGTE+QDWA+MLL Sbjct: 59 EEDDSIQEELEETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLL 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY R+ + FK E L+ G+EAGIKS TL +GPNAYG+LK E GVHRLVRISP+DS Sbjct: 119 RMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSF+S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG Sbjct: 179 AKRRHTSFTSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV +R+Q+ N+ +A ML+AKLY++E +K+ E N + K EI WG QIRSYV Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFT 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RT E V+DGD++ F+ A L + Sbjct: 299 PYTMVKDHRTGYEVAQVDKVMDGDIEGFIDACLKWR 334 >gi|227552028|ref|ZP_03982077.1| peptide chain release factor 2 [Enterococcus faecium TX1330] gi|257879881|ref|ZP_05659534.1| peptide chain release factor 2 [Enterococcus faecium 1,230,933] gi|257882725|ref|ZP_05662378.1| peptide chain release factor 2 [Enterococcus faecium 1,231,502] gi|257884039|ref|ZP_05663692.1| peptide chain release factor 2 [Enterococcus faecium 1,231,501] gi|257890396|ref|ZP_05670049.1| peptide chain release factor 2 [Enterococcus faecium 1,231,410] gi|257895380|ref|ZP_05675033.1| peptide chain release factor 2 [Enterococcus faecium Com12] gi|257897991|ref|ZP_05677644.1| peptide chain release factor 2 [Enterococcus faecium Com15] gi|260559609|ref|ZP_05831789.1| peptide chain release factor 2 [Enterococcus faecium C68] gi|261208674|ref|ZP_05923111.1| peptide chain release factor 2 [Enterococcus faecium TC 6] gi|289566068|ref|ZP_06446505.1| peptide chain release factor 2 [Enterococcus faecium D344SRF] gi|293378249|ref|ZP_06624418.1| peptide chain release factor 2 [Enterococcus faecium PC4.1] gi|293556398|ref|ZP_06674979.1| peptide chain release factor 2 [Enterococcus faecium E1039] gi|293560376|ref|ZP_06676869.1| peptide chain release factor 2 [Enterococcus faecium E1162] gi|293568705|ref|ZP_06680020.1| peptide chain release factor 2 [Enterococcus faecium E1071] gi|293572408|ref|ZP_06683388.1| peptide chain release factor 2 [Enterococcus faecium E980] gi|294616268|ref|ZP_06696061.1| peptide chain release factor 2 [Enterococcus faecium E1636] gi|294617600|ref|ZP_06697230.1| peptide chain release factor 2 [Enterococcus faecium E1679] gi|294622340|ref|ZP_06701373.1| peptide chain release factor 2 [Enterococcus faecium U0317] gi|314939593|ref|ZP_07846820.1| peptide chain release factor 2 [Enterococcus faecium TX0133a04] gi|314941219|ref|ZP_07848115.1| peptide chain release factor 2 [Enterococcus faecium TX0133C] gi|314948616|ref|ZP_07851991.1| peptide chain release factor 2 [Enterococcus faecium TX0082] gi|314953358|ref|ZP_07856285.1| peptide chain release factor 2 [Enterococcus faecium TX0133A] gi|314993437|ref|ZP_07858802.1| peptide chain release factor 2 [Enterococcus faecium TX0133B] gi|314995786|ref|ZP_07860875.1| peptide chain release factor 2 [Enterococcus faecium TX0133a01] gi|227178781|gb|EEI59753.1| peptide chain release factor 2 [Enterococcus faecium TX1330] gi|257814109|gb|EEV42867.1| peptide chain release factor 2 [Enterococcus faecium 1,230,933] gi|257818383|gb|EEV45711.1| peptide chain release factor 2 [Enterococcus faecium 1,231,502] gi|257819877|gb|EEV47025.1| peptide chain release factor 2 [Enterococcus faecium 1,231,501] gi|257826756|gb|EEV53382.1| peptide chain release factor 2 [Enterococcus faecium 1,231,410] gi|257831945|gb|EEV58366.1| peptide chain release factor 2 [Enterococcus faecium Com12] gi|257835903|gb|EEV60977.1| peptide chain release factor 2 [Enterococcus faecium Com15] gi|260074277|gb|EEW62599.1| peptide chain release factor 2 [Enterococcus faecium C68] gi|260077176|gb|EEW64896.1| peptide chain release factor 2 [Enterococcus faecium TC 6] gi|289162175|gb|EFD10038.1| peptide chain release factor 2 [Enterococcus faecium D344SRF] gi|291588665|gb|EFF20498.1| peptide chain release factor 2 [Enterococcus faecium E1071] gi|291590782|gb|EFF22498.1| peptide chain release factor 2 [Enterococcus faecium E1636] gi|291596206|gb|EFF27469.1| peptide chain release factor 2 [Enterococcus faecium E1679] gi|291598167|gb|EFF29266.1| peptide chain release factor 2 [Enterococcus faecium U0317] gi|291601465|gb|EFF31736.1| peptide chain release factor 2 [Enterococcus faecium E1039] gi|291605664|gb|EFF35105.1| peptide chain release factor 2 [Enterococcus faecium E1162] gi|291607470|gb|EFF36812.1| peptide chain release factor 2 [Enterococcus faecium E980] gi|292643113|gb|EFF61254.1| peptide chain release factor 2 [Enterococcus faecium PC4.1] gi|313590058|gb|EFR68903.1| peptide chain release factor 2 [Enterococcus faecium TX0133a01] gi|313592102|gb|EFR70947.1| peptide chain release factor 2 [Enterococcus faecium TX0133B] gi|313594634|gb|EFR73479.1| peptide chain release factor 2 [Enterococcus faecium TX0133A] gi|313599943|gb|EFR78786.1| peptide chain release factor 2 [Enterococcus faecium TX0133C] gi|313641133|gb|EFS05713.1| peptide chain release factor 2 [Enterococcus faecium TX0133a04] gi|313644947|gb|EFS09527.1| peptide chain release factor 2 [Enterococcus faecium TX0082] Length = 327 Score = 257 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 162/324 (50%), Positives = 220/324 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + A+ ++ E + + L + +++E+ EE D ++ +E Sbjct: 1 MAEPGFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVEMLQEEPDAAMQEEAE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + +++ + LL G D N+A +E+H GAGGTESQDW +MLLRMYTRWAE+ Sbjct: 61 TRINALDEKMKTYELSMLLDGPYDRNNAIVELHPGAGGTESQDWGSMLLRMYTRWAEQHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 ++ E L+ G+EAGIKS TLLIKG NA+G+LK E+GVHRLVRISP+DS RRHTSF S+ Sbjct: 121 YQVETLDYQAGDEAGIKSVTLLIKGHNAFGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D++I+IEI+ D +IDTYRASGAGGQH+N T+SAVRITH+PTG VV Q +RSQ Sbjct: 181 DVMPELDETIDIEINPDDLKIDTYRASGAGGQHINKTESAVRITHLPTGTVVASQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML+AKLY+LE++K+E+ A + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 +E + V+DGDLD F+ L + Sbjct: 301 VETGNVQAVMDGDLDLFIDGYLKM 324 >gi|254432093|ref|ZP_05045796.1| peptide chain release factor 2 [Cyanobium sp. PCC 7001] gi|197626546|gb|EDY39105.1| peptide chain release factor 2 [Cyanobium sp. PCC 7001] Length = 358 Score = 257 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 144/341 (42%), Positives = 206/341 (60%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD R L P W + A+ MR+ + + ++ + + D Sbjct: 3 RTVFDVPALKARQQDLEQLASQPDFWDDQQAAQKQMRQLDDVKAQLEQLERWKAAVSDAE 62 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LEL E D +L+E + L ++ +++ + E LLSG D A L ++AGAGGT++ Sbjct: 63 ATLELHELEPDGDLLEEANAGLTSLRGDLDRWELERLLSGPYDKEGAVLTINAGAGGTDA 122 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRWAE E+ +GEEAGIKSAT+ I+G AYG+L+ E+G HRL Sbjct: 123 QDWAQMLLRMYTRWAEDHGMTVSVDELSEGEEAGIKSATIEIEGRYAYGYLRNEKGTHRL 182 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+++N +R TSF+ + V P +++ ++++I + D I T R+ GAGGQ+VN ++AV Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKIEEEVKLDIPDKDLEITTSRSGGAGGQNVNKVETAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RI HIPTG+ V+C QERSQ +NK +A +L AKL + ++R E WG Sbjct: 243 RILHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIR+YV PYQ+VKDLRT E T V+DGDLD F+++ L Sbjct: 303 QIRNYVFHPYQLVKDLRTQHETTDVQGVMDGDLDPFIQSLL 343 >gi|19745741|ref|NP_606877.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS8232] gi|50913897|ref|YP_059869.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS10394] gi|71903175|ref|YP_279978.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS6180] gi|94988152|ref|YP_596253.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS9429] gi|94990034|ref|YP_598134.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS10270] gi|94992039|ref|YP_600138.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS2096] gi|94993945|ref|YP_602043.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS10750] gi|306827732|ref|ZP_07461004.1| peptide chain release factor RF2 [Streptococcus pyogenes ATCC 10782] gi|19747880|gb|AAL97376.1| putative peptide chain release factor 2 [Streptococcus pyogenes MGAS8232] gi|50902971|gb|AAT86686.1| Bacterial Peptide Chain Release Factor 2 [Streptococcus pyogenes MGAS10394] gi|71802270|gb|AAX71623.1| bacterial peptide chain release factor 2 [Streptococcus pyogenes MGAS6180] gi|94541660|gb|ABF31709.1| bacterial peptide chain release factor 2 (RF-2) [Streptococcus pyogenes MGAS9429] gi|94543542|gb|ABF33590.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Streptococcus pyogenes MGAS10270] gi|94545547|gb|ABF35594.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Streptococcus pyogenes MGAS2096] gi|94547453|gb|ABF37499.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Streptococcus pyogenes MGAS10750] gi|304430050|gb|EFM33087.1| peptide chain release factor RF2 [Streptococcus pyogenes ATCC 10782] Length = 337 Score = 257 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 149/336 (44%), Positives = 213/336 (63%), Gaps = 2/336 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L +P W + I A+ +E L +Q+ + +LLE+ E Sbjct: 1 MEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 +D + +E +NL ++ + + LLS D N+A LE+H G+GGTE+QDW ++LL Sbjct: 61 DDS--LKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLL 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTR+ FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS Sbjct: 119 RMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG Sbjct: 179 AKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV +R+Q+ N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV Sbjct: 239 IVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFT 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E V+DG+++ F+ A L + Sbjct: 299 PYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 334 >gi|330836506|ref|YP_004411147.1| bacterial peptide chain release factor 2 (bRF-2) [Spirochaeta coccoides DSM 17374] gi|329748409|gb|AEC01765.1| bacterial peptide chain release factor 2 (bRF-2) [Spirochaeta coccoides DSM 17374] Length = 369 Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 163/353 (46%), Positives = 226/353 (64%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + + D +++ L KT P W + +A+ + L ++ ++ Sbjct: 11 EIKEEAYTVWRRLDSTGIEKQIQELEAKTTLPDFWNDKEKAEKTFSDLSSLKDSFFPWRD 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ R+ D L++L EDD S++QE + I+ E + ++LLS D ND +L + Sbjct: 71 LKKRIDDVGDLIDLYANEDDESLVQELDSQILDIEKEFHPLKVKTLLSQRFDKNDCFLSI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGTE+ DWA ML+RMY RW E+ FK+E L++ + +E GIKS T+ + G A+G+L Sbjct: 131 HAGAGGTEASDWAAMLMRMYLRWCERNGFKSEILDMQE-DEGGIKSTTIRVSGQYAFGYL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE GVHRLVRISP+DS RRHTSF+S++ PV+DD IEI+I D R+DTYRA GAGGQ Sbjct: 190 KGEAGVHRLVRISPFDSQKRRHTSFTSVYASPVIDDEIEIDIKPEDIRLDTYRAGGAGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVRITH +G+VVQCQ ERSQ NK A+ MLR++LYE +K+E+ Sbjct: 250 HVNKTDSAVRITHFESGIVVQCQNERSQFMNKEVAFKMLRSRLYEYYKEKQEQEHQKTAI 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +K I WG QIRSYV QPY MVKD RTN + + V+DGD+DDF++ L Sbjct: 310 AKKGITWGSQIRSYVFQPYTMVKDHRTNCQVGNIQAVMDGDIDDFIEQFLQWD 362 >gi|293365065|ref|ZP_06611782.1| peptide chain release factor RF2 [Streptococcus oralis ATCC 35037] gi|307702226|ref|ZP_07639186.1| peptide chain release factor 2 [Streptococcus oralis ATCC 35037] gi|291316515|gb|EFE56951.1| peptide chain release factor RF2 [Streptococcus oralis ATCC 35037] gi|307624239|gb|EFO03216.1| peptide chain release factor 2 [Streptococcus oralis ATCC 35037] Length = 325 Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 149/325 (45%), Positives = 205/325 (63%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L N + +++++ + ILL+ E++ Sbjct: 1 MTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVHDELVEQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 61 LTELDM--MMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG VVQ +R+Q Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|259506494|ref|ZP_05749396.1| peptide chain release factor 2 [Corynebacterium efficiens YS-314] gi|259165914|gb|EEW50468.1| peptide chain release factor 2 [Corynebacterium efficiens YS-314] Length = 387 Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 155/353 (43%), Positives = 217/353 (61%), Gaps = 3/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + + + R+ L + DP LW N A+ + E H+ + + E Sbjct: 31 ELDSTLTTIEKILNPEELSDRVRELEAQAADPGLWDNPDHAQQVTSELSHVQAELRKVTE 90 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D I+ EL E++ + L ++ VE + +++LSGE D+ +A + + Sbjct: 91 LRQRLDDLPIMYEL--AEEEGDDTSLVDEELADLRTGVEALEVKTMLSGEYDAREAVINI 148 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMY RWAEK K + +I EEAGIKSAT ++ G YG L Sbjct: 149 RSGAGGVDAADWAEMLMRMYIRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGDYMYGQL 208 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ + V PVV+ I+I +S+ R+D YR+SG GGQ Sbjct: 209 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQVDSIDIPDSEVRVDVYRSSGPGGQ 268 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + Q+ + + Sbjct: 269 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKRQEERAEMDALGA 328 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG Q+RSYVL PYQMVKDLRTN E PS VLDGD+D ++A + + Sbjct: 329 G-GNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDIDGLLEAGIRWR 380 >gi|226365870|ref|YP_002783653.1| peptide chain release factor 2 [Rhodococcus opacus B4] gi|254790919|sp|C1B1L3|RF2_RHOOB RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|226244360|dbj|BAH54708.1| peptide chain release factor 2 [Rhodococcus opacus B4] Length = 368 Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 153/355 (43%), Positives = 223/355 (62%), Gaps = 6/355 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + +R+ L + DP LW + A+ + + H + ++E Sbjct: 11 ELDTTLRTVESVLDVEELRRRIDELEHQAADPELWNDQEHAQQVTSQLSHSQAELRRVEE 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D +L ELA + + + + ++ ++ + +++LSGE D DA + + Sbjct: 71 LRTRLDDMPVLYELAED-EGAEAIADADAERHSLREDIAAMEVKTMLSGEYDERDALVNI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMY RWAEK + E + EEAGIKSAT +K P +YG L Sbjct: 130 RSGAGGVDAADWAEMLMRMYIRWAEKHGYGVEVYDTSYAEEAGIKSATFAVKAPYSYGTL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+ + V PVV+ + I+++E+D R+D YR+SG GGQ Sbjct: 190 SVEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIDVNENDVRVDVYRSSGPGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL E+ KR+E ++ Sbjct: 250 SVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLEV---KRKEERAEMDA 306 Query: 302 SKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K + G WG Q+RSYVL PYQMVKDLRT E +PS VLDGD+D F+++ + + Sbjct: 307 LKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVNNPSSVLDGDIDGFLESGIRWR 361 >gi|307708908|ref|ZP_07645368.1| peptide chain release factor 2 [Streptococcus mitis SK564] gi|307620244|gb|EFN99360.1| peptide chain release factor 2 [Streptococcus mitis SK564] Length = 325 Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 149/325 (45%), Positives = 204/325 (62%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L N + ++++ + ILL+ E++ Sbjct: 1 MTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVQEELVAQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 61 LAELD--KMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ +R+Q Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|301801602|emb|CBW34300.1| peptide chain release factor 2 [Streptococcus pneumoniae INV200] Length = 325 Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 148/325 (45%), Positives = 205/325 (63%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ + +E L N + ++++ + ILL+ E++ Sbjct: 1 MTEPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHDELVAQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 61 LAELD--KIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+T+IPTG+VVQ +R+Q Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVVQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|260436566|ref|ZP_05790536.1| peptide chain release factor 2 [Synechococcus sp. WH 8109] gi|260414440|gb|EEX07736.1| peptide chain release factor 2 [Synechococcus sp. WH 8109] Length = 356 Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 150/344 (43%), Positives = 206/344 (59%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 L +FD R L P W + A+ MR + +S + + + D Sbjct: 2 LRTVFDVPALNARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAQLSQLAGWRGAVDDA 61 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LEL + D +LQE + L +++ ++ + E LLSGE D A L ++AGAGGT+ Sbjct: 62 QATLELYELDPDEDLLQEAQNGLNQLRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTD 121 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA MLLRMYTRWAE K E+ +GEEAGIKS T+ I+G AYG+L+ E+G HR Sbjct: 122 AQDWAQMLLRMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHR 181 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+++N +R TSF+ + V P +++ ++++I E D I T R+ GAGGQ+VN ++A Sbjct: 182 LVRISPFNANDKRQTSFAGVEVMPKIEEDVKLDIPEKDLEITTSRSGGAGGQNVNKVETA 241 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRI HIPTG+ V+C QERSQ +NK +A +L AKL + ++R E WG Sbjct: 242 VRILHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWG 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIR+YV QPYQMVKDLRTN E V+DG LD F+ A L Sbjct: 302 NQIRNYVFQPYQMVKDLRTNEETNDVQAVMDGALDPFIDACLRQ 345 >gi|297562654|ref|YP_003681628.1| peptide chain release factor 2 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847102|gb|ADH69122.1| peptide chain release factor 2 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 372 Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 153/353 (43%), Positives = 220/353 (62%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ L + + D + +++ L ++ DP LW + A+ + R+ L++ ++ I I Sbjct: 13 LAATLASVSAVLDLEAMHTQIAELREQSADPELWADQDNAQKVTRQLSSLESMVNKINGI 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 RL D +L ELA EDD E L +++ E+ + +LL+G D +A + ++ Sbjct: 73 GQRLDDLGVLYELAEAEDDADTRVEADRELDQLRKEIGELEVRTLLNGPHDEREAIVTIN 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ DWA ML RMY RWAE+ + T+ E EEAGIKS + +K P AYG L+ Sbjct: 133 SQAGGVDAADWAQMLQRMYLRWAERHGYPTDVYETSYAEEAGIKSTSFAVKTPFAYGTLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE G HRLVRISP+D+ +RR TSF+ + V PVV+ S IEI + D R+D YR+SG GGQ Sbjct: 193 GEHGTHRLVRISPFDNQNRRQTSFAGVDVVPVVEQSDHIEIDDGDLRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A +ML+AKL + ++ + + Sbjct: 253 VNTTDSAVRITHLPTGIVVSCQNERSQLQNKATAMSMLQAKLLARKREEEQAALDEIRGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+R+YVL PYQ VKD+RT E + S VLDGD+D+F+ A + + Sbjct: 313 -SVSSWGTQMRNYVLHPYQSVKDVRTGAETGNTSGVLDGDIDEFIDAEIRWMR 364 >gi|194468150|ref|ZP_03074136.1| peptide chain release factor 2 [Lactobacillus reuteri 100-23] gi|194453003|gb|EDX41901.1| peptide chain release factor 2 [Lactobacillus reuteri 100-23] Length = 332 Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 156/325 (48%), Positives = 211/325 (64%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + +A+ ++ E L ++D++ D +EL E D + ++ Sbjct: 1 MAQPDFWNDNEQAQKVIAENNILKEKRDTFVNLRDQIGDLETSIELLTVEPDDDLQRDFE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + + +E + LL GE D+ +A LE+H GAGGTE+QDW MLLRMY RW E+ Sbjct: 61 VSFTKTQKALEQYRLTQLLDGEYDAKNAILEIHPGAGGTEAQDWGEMLLRMYVRWGEQHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E G+EAGIKS TLLIKG NA+G+L+ E+GVHRLVRISP+D+ RRHTSF+S+ Sbjct: 121 FSVETASYEAGDEAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDAAGRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DDS+E++I SD R+DT+R+SGAGGQH+N +SAVRITHIPTG+V Q ERSQ Sbjct: 181 DVMPELDDSVEVDIDPSDLRVDTFRSSGAGGQHINKIESAVRITHIPTGIVTSSQAERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A NML++KLYELE +K+ + E + +IGWG QIRSYV PY +VKD RT Sbjct: 241 LQNRVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLDIGWGSQIRSYVFHPYTLVKDNRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L K Sbjct: 301 YETHNGQAVMDGDLDPFIDAFLQWK 325 >gi|25027367|ref|NP_737421.1| peptide chain release factor 2 [Corynebacterium efficiens YS-314] gi|23492648|dbj|BAC17621.1| putative translation releasing factor RF-2 [Corynebacterium efficiens YS-314] Length = 389 Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 155/353 (43%), Positives = 217/353 (61%), Gaps = 3/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + + + R+ L + DP LW N A+ + E H+ + + E Sbjct: 33 ELDSTLTTIEKILNPEELSDRVRELEAQAADPGLWDNPDHAQQVTSELSHVQAELRKVTE 92 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D I+ EL E++ + L ++ VE + +++LSGE D+ +A + + Sbjct: 93 LRQRLDDLPIMYEL--AEEEGDDTSLVDEELADLRTGVEALEVKTMLSGEYDAREAVINI 150 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMY RWAEK K + +I EEAGIKSAT ++ G YG L Sbjct: 151 RSGAGGVDAADWAEMLMRMYIRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGDYMYGQL 210 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ + V PVV+ I+I +S+ R+D YR+SG GGQ Sbjct: 211 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQVDSIDIPDSEVRVDVYRSSGPGGQ 270 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + Q+ + + Sbjct: 271 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKRQEERAEMDALGA 330 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG Q+RSYVL PYQMVKDLRTN E PS VLDGD+D ++A + + Sbjct: 331 G-GNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDIDGLLEAGIRWR 382 >gi|239930935|ref|ZP_04687888.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672] Length = 352 Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 155/349 (44%), Positives = 214/349 (61%), Gaps = 1/349 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + + + D D ++ L + P LW N EA+ + HL + + ++ R+ Sbjct: 1 MESIEAVLDLDRMRADIAVLEEQAAAPSLWDNPDEAQKITSRLSHLQAEVRKAEALRGRI 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D +L E+A EEDD E L ++ ++ + +LLSGE D+ +A + + A AG Sbjct: 61 DDLAVLFEMAEEEDDPDTRAEAEAELADVRKALDEMEVRTLLSGEYDAREALVNIRAEAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L EQG Sbjct: 121 GVDAADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLSVEQG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HRLVRISP+D+ RR TSF+ + V PVV+ S ++I ESD R+D YR+SG GGQ VNTT Sbjct: 181 THRLVRISPFDNQGRRQTSFAGVEVLPVVEQSDHVDIDESDLRVDVYRSSGPGGQGVNTT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIPTG+VV CQ ERSQ +N+A A N+L+AKL E Q+ + + + Sbjct: 241 DSAVRITHIPTGIVVSCQNERSQIQNRATAMNVLQAKLLERRRQEEQAKMDALKGDGGN- 299 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 300 SWGNQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWRK 348 >gi|227832559|ref|YP_002834266.1| peptide chain release factor RF-2 [Corynebacterium aurimucosum ATCC 700975] gi|262183572|ref|ZP_06042993.1| peptide chain release factor 2 [Corynebacterium aurimucosum ATCC 700975] gi|254790912|sp|C3PES4|RF2_CORA7 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|227453575|gb|ACP32328.1| peptide chain release factor RF-2 [Corynebacterium aurimucosum ATCC 700975] Length = 368 Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 155/353 (43%), Positives = 219/353 (62%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LS L + + D + +R+ L + DP LW + A+ + E + + Sbjct: 11 ELSATLTSIEKVMDPEAVSERVRELEAQAGDPSLWDDPDHAQKVTSELSAQQAKLRKLNS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ R+ D ++ ELA EE D + + L+ + +E + ++LSGE D +A + + Sbjct: 71 LRGRIEDLPVMSELAEEEGDEASQELVETELKELGAAIESLEVTTMLSGEYDEREAVINI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMYTRWAEK K + +I EEAGIKSAT ++ G YG L Sbjct: 131 RSGAGGVDAADWAEMLMRMYTRWAEKNGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + IE+ +S+ R+D YR+SG GGQ Sbjct: 191 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDSIEVPDSEVRVDVYRSSGPGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + Q+ + + Sbjct: 251 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAELDALGA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG Q+RSYVL PYQMVKDLRTN E PS VLDGD+D F+++ + + Sbjct: 311 G-GNASWGNQMRSYVLHPYQMVKDLRTNYEVGDPSKVLDGDIDGFLESGIRWR 362 >gi|148992417|ref|ZP_01822112.1| peptide chain release factor 2 [Streptococcus pneumoniae SP9-BS68] gi|147928734|gb|EDK79747.1| peptide chain release factor 2 [Streptococcus pneumoniae SP9-BS68] gi|332073119|gb|EGI83598.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17570] Length = 325 Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 148/325 (45%), Positives = 205/325 (63%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ + +E L N + ++++ + ILL+ E++ Sbjct: 1 MTEPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHDELVAQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 61 LAELD--KIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+T+IPTG+VVQ +R+Q Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVVQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|306835540|ref|ZP_07468554.1| peptide chain release factor RF2 [Corynebacterium accolens ATCC 49726] gi|304568597|gb|EFM44148.1| peptide chain release factor RF2 [Corynebacterium accolens ATCC 49726] Length = 370 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 153/353 (43%), Positives = 216/353 (61%), Gaps = 4/353 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + R+ L + DP LW + A+ + E + ++ Sbjct: 14 QLDTTLTTIEKVMDPEALAARIRELEAQAGDPSLWDDPEHAQKVTSELSSAQAKVRKLES 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D ++ ELA EE S+ E L + +E + ++LSGE D +A + + Sbjct: 74 LRGRLDDMPVMYELAEEEGTVSVADEDLAEL---ESAIESLEVTTMLSGEYDPREAVINI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMYTRWA K K + +I EEAGIKSAT ++ G YG L Sbjct: 131 RSGAGGVDAADWAEMLMRMYTRWAGKHDHKVDIYDISYAEEAGIKSATFVVHGEYMYGQL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVR+SP+D+ RR TSF+ + V PVV+ + I++ +++ R+D YR+SG GGQ Sbjct: 191 SVEQGAHRLVRLSPFDNQGRRQTSFAEVEVLPVVEQTDHIDVPDNEVRVDVYRSSGPGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + Q+ + + Sbjct: 251 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAELDALGA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG Q+RSYVL PYQMVKDLRTN E PS VLDGD+D F++A + + Sbjct: 311 G-GNASWGNQMRSYVLHPYQMVKDLRTNFEMGDPSKVLDGDIDGFLEAGIRWR 362 >gi|15674713|ref|NP_268887.1| peptide chain release factor 2 [Streptococcus pyogenes M1 GAS] gi|71910343|ref|YP_281893.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS5005] gi|13621834|gb|AAK33608.1| putative peptide chain release factor 2 [Streptococcus pyogenes M1 GAS] gi|71853125|gb|AAZ51148.1| bacterial peptide chain release factor 2 [Streptococcus pyogenes MGAS5005] Length = 337 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 149/336 (44%), Positives = 213/336 (63%), Gaps = 2/336 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L +P W + I A+ +E L +Q+ + +LLE+ E Sbjct: 1 MEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 +D + +E +NL ++ + + LLS D N+A LE+H G+GGTE+QDW ++LL Sbjct: 61 DDS--LKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLL 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTR+ FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS Sbjct: 119 RMYTRFGNANGFKIEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG Sbjct: 179 AKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV +R+Q+ N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV Sbjct: 239 IVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFT 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E V+DG+++ F+ A L + Sbjct: 299 PYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 334 >gi|322388283|ref|ZP_08061887.1| peptide chain release factor RF2 [Streptococcus infantis ATCC 700779] gi|321140955|gb|EFX36456.1| peptide chain release factor RF2 [Streptococcus infantis ATCC 700779] Length = 325 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 148/325 (45%), Positives = 203/325 (62%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L N + ++ + + ILL+ E++ Sbjct: 1 MTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMDELQDEVEILLDFLAEDESVKDELVEK 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 61 LSELD--QMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE++I E D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q Sbjct: 179 EVMPELDDTIEVDIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RTN Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTN 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|223932890|ref|ZP_03624886.1| peptide chain release factor 2 [Streptococcus suis 89/1591] gi|330832393|ref|YP_004401218.1| peptide chain release factor 2 [Streptococcus suis ST3] gi|223898471|gb|EEF64836.1| peptide chain release factor 2 [Streptococcus suis 89/1591] gi|329306616|gb|AEB81032.1| peptide chain release factor 2 [Streptococcus suis ST3] Length = 325 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 148/325 (45%), Positives = 202/325 (62%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + + A+ +E L N ++ D ++ ILL+ +D S+ E Sbjct: 1 MTEPDFWNDNLAAQKTSQELNELKNTYGNFHQMLDLYDESEILLDF--LAEDESVRDELV 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + + + LLS D N+A LE+H G+GGTE+QDW MLLRMY R+ + Sbjct: 59 EKLVELDKTMTAYEMTLLLSDPYDHNNAILEIHPGSGGTEAQDWGEMLLRMYQRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L+ G+EAGIKS TL GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FIVETLDYQAGDEAGIKSVTLSFTGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEIEI + + ++DT+R+ GAGGQ+VN + VR+THIPTG+V Q +R+Q Sbjct: 179 EVMPELDDTIEIEIRDDEVKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A +L+AKLY+LE +K+ + + K EI WG QIRSYV PY MVKD RT Sbjct: 239 YGNRDRAMKLLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYTMVKDHRTG 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|313113161|ref|ZP_07798787.1| peptide chain release factor 2 [Faecalibacterium cf. prausnitzii KLE1255] gi|310624500|gb|EFQ07829.1| peptide chain release factor 2 [Faecalibacterium cf. prausnitzii KLE1255] Length = 373 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 151/349 (43%), Positives = 218/349 (62%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 + + L D + +R+ L P + + +K + E L +S +++Q Sbjct: 16 KAVKDLEEALAIDASRKRVQELEHTMSRPGFYDDADLSKKVFDEVGDLKGKLSRFEKLQG 75 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 D +LE+ EE D +++ E +++ + V+ Q ++L+GE D ++A L HAG Sbjct: 76 LYDDAETMLEMLDEEYDPAMIPEAEESVNAVGKAVDELQLMTMLNGEYDHSNAILTFHAG 135 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 GGTE+QDWA ML RMY +WA E L+ DG+EAG+KSA++++KG NAYG LK E Sbjct: 136 TGGTEAQDWAEMLYRMYNKWASNHGMTVEVLDYQDGDEAGMKSASMMVKGANAYGLLKSE 195 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHRLVR+SP+D+N+RR TSF+S+ V P +D++I+++IS D + YR+SGAGGQH+N Sbjct: 196 NGVHRLVRVSPFDANARRQTSFASLEVMPELDNTIQVDISPEDIEMQVYRSSGAGGQHIN 255 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T SAVR+ H PTGVVV CQ +RSQ +N+ A ML+AKLY++ Q+ + + + + Sbjct: 256 KTSSAVRLIHKPTGVVVSCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKGVQN 315 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 EI WG QIRSYV PY MVKD RTN E + V+DGDLD F+ A L Sbjct: 316 EIAWGHQIRSYVFMPYTMVKDHRTNYETGNVDAVMDGDLDGFIFAYLKA 364 >gi|307705242|ref|ZP_07642109.1| peptide chain release factor 2 [Streptococcus mitis SK597] gi|307621191|gb|EFO00261.1| peptide chain release factor 2 [Streptococcus mitis SK597] Length = 325 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 152/325 (46%), Positives = 211/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L N + +++++ + ILL+ +D S+ +E Sbjct: 1 MTEPDFWNDNIAAQKTSQELNELKNTYNTFQKMEELQDEVEILLDF--LAEDESVHEELV 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 59 EQLSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ +R+Q Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|118467007|ref|YP_883159.1| peptide chain release factor 2 [Mycobacterium avium 104] gi|166225107|sp|A0QJS1|RF2_MYCA1 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|118168294|gb|ABK69191.1| peptide chain release factor 2 [Mycobacterium avium 104] Length = 370 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 163/356 (45%), Positives = 221/356 (62%), Gaps = 7/356 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R+ L + DP LW + A+ + E H + I+E+ Sbjct: 12 LDSTLTTVERVLDVDGLRARIEKLEHEASDPQLWDDQARAQRVTSELSHAQGELRRIEEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSGEADSNDAYLE 120 + RL D +L ELA EE + + + + + ++E + +LLSGE D +A + Sbjct: 72 RARLDDLPVLYELAAEEGEGAAEALAEADAELKALRADIEATEVRTLLSGEYDEREALVT 131 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + +GAGG ++ DWA ML+RMY RWAE+ K+ E + EEAGIKSAT + P AYG Sbjct: 132 IRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGT 191 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+SG GG Sbjct: 192 LSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL E +KR E + Sbjct: 252 QSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKISAMRVLQAKLLE---RKRSEERAELD 308 Query: 301 SSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + K E G WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F++A + + Sbjct: 309 ALKGEGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWR 364 >gi|300783176|ref|YP_003763467.1| peptide chain release factor RF-2 [Amycolatopsis mediterranei U32] gi|299792690|gb|ADJ43065.1| peptide chain release factor RF-2 [Amycolatopsis mediterranei U32] Length = 357 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 147/352 (41%), Positives = 216/352 (61%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ +L + + D D +++ L + P+LW + A+ + + H + + ++ Sbjct: 4 LTGKLTQIESVMDLDALRAQVADLEQQASSPNLWDDPEAAQKVTSQLSHRQGELRRVSDL 63 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L ELA E D + E L + ++ + +LLSGE D +A + + Sbjct: 64 RQRLDDLGVLYELAEAEGDSGSMAEAEAELTDLGKAIDGLEVRTLLSGEYDDRNAVVTIR 123 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A MLLRMY RWAE+ + T+ +I EEAGIKSAT + P YG L Sbjct: 124 SEAGGVDAADFAEMLLRMYLRWAERHGYPTDVYDISYAEEAGIKSATFKVSAPYVYGTLS 183 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ SRR TSF+ + V P V++ ++++E D R+D YR+SG GGQ Sbjct: 184 VEQGTHRLVRISPFDNQSRRQTSFAHVEVLPEVEEVDHVDVAEKDIRVDVYRSSGPGGQS 243 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV CQ E+SQ +NKA A +L+A+L + ++ + Sbjct: 244 VNTTDSAVRITHLPTGIVVSCQNEKSQLQNKAAAMKVLQARLMLRKKEEERAEMDALRDG 303 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT+ E +P+ VLDGD+D F+ A + + Sbjct: 304 GS--SWGNQMRSYVLHPYQMVKDLRTDYEVGNPTAVLDGDIDGFLDAGIRWR 353 >gi|192358804|ref|YP_001982940.1| peptide chain release factor 2 [Cellvibrio japonicus Ueda107] gi|190684969|gb|ACE82647.1| peptide chain release factor 2 [Cellvibrio japonicus Ueda107] Length = 329 Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats. Identities = 168/327 (51%), Positives = 227/327 (69%), Gaps = 1/327 (0%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 + + +W N A+ L RER L+ + I+ + + D LL++A+EE+D S++ Sbjct: 2 ELELAESSVWDNPERAQALGRERSSLEIVVKTIESLDSGVADCGELLDMAVEENDESMVA 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 + + R++ E+ +F + SGE D N+AYL++ +G+GGTE+QDWA M+LRMY RW E Sbjct: 62 DVQAEIDRLEKELGVLEFRRMFSGETDPNNAYLDIQSGSGGTEAQDWAEMVLRMYLRWGE 121 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + FK E GE AGIKSAT+ +G A+GWL+ E GVHRLVR SP+DS +RRHTSF Sbjct: 122 AKGFKVTLEECSAGEVAGIKSATIYFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSF 181 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 S++V P +DD+IEIEI+ +D RIDTYRASGAGGQHVN TDSA+RITHIP+G+VVQCQ E Sbjct: 182 CSVFVSPEIDDNIEIEINPADLRIDTYRASGAGGQHVNKTDSAIRITHIPSGIVVQCQNE 241 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQH N+ +A+ MLRA++YE E+ KR E SK++IGWG QIRSYVL VKDL Sbjct: 242 RSQHANRDKAYKMLRARMYEQEMLKRNAEKQAMEDSKSDIGWGSQIRSYVLDD-SRVKDL 300 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAI 353 RT ++ ++ VLDGDLD F+ +L Sbjct: 301 RTGVQTSNTQAVLDGDLDQFIVESLKA 327 >gi|213965439|ref|ZP_03393634.1| peptide chain release factor 2 [Corynebacterium amycolatum SK46] gi|213951823|gb|EEB63210.1| peptide chain release factor 2 [Corynebacterium amycolatum SK46] Length = 370 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 155/353 (43%), Positives = 213/353 (60%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D D R+ L + DP LW + A+ + + I Sbjct: 11 ELDATLTTIEKVVDVDELSDRIRELEAQAADPSLWDDPDHAQQVTSALSQAQAKMKKIDS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D ++ ELA EE D ++ ++ +E + ++LSG D +A + + Sbjct: 71 LRGRLDDLSVMYELAEEESDSDAVEMADAERAELRAAIESLEVTTMLSGPYDEREAVINI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMY RWA+K K E + EEAGIKSAT ++ G YG L Sbjct: 131 RSGAGGVDAADWAEMLMRMYLRWADKHGHKVEVYDTSYAEEAGIKSATFVVHGEYMYGTL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ I+I ESD RID YR+SG GGQ Sbjct: 191 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEETDHIDIPESDLRIDVYRSSGPGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+TH+PTG+VV CQ E+SQH+NKA A +L+AKL E + Q+ + + Sbjct: 251 SVNTTDSAVRLTHVPTGIVVTCQNEKSQHQNKASAMRVLQAKLLEKKRQEERAELDALGA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG Q+RSYVL PYQMVKDLRT E +P VLDGDLD F++A + + Sbjct: 311 G-GNASWGNQMRSYVLHPYQMVKDLRTEYEVNNPQSVLDGDLDGFIEAGIRWR 362 >gi|111658353|ref|ZP_01409041.1| hypothetical protein SpneT_02000493 [Streptococcus pneumoniae TIGR4] gi|148997169|ref|ZP_01824823.1| peptide chain release factor 2 [Streptococcus pneumoniae SP11-BS70] gi|149010619|ref|ZP_01831990.1| peptide chain release factor 2 [Streptococcus pneumoniae SP19-BS75] gi|221231551|ref|YP_002510703.1| peptide chain release factor 2 [Streptococcus pneumoniae ATCC 700669] gi|298502540|ref|YP_003724480.1| peptide chain release factor RF2 [Streptococcus pneumoniae TCH8431/19A] gi|147756869|gb|EDK63909.1| peptide chain release factor 2 [Streptococcus pneumoniae SP11-BS70] gi|147765100|gb|EDK72029.1| peptide chain release factor 2 [Streptococcus pneumoniae SP19-BS75] gi|220674011|emb|CAR68524.1| peptide chain release factor 2 [Streptococcus pneumoniae ATCC 700669] gi|298238135|gb|ADI69266.1| peptide chain release factor RF2 [Streptococcus pneumoniae TCH8431/19A] gi|301793914|emb|CBW36310.1| peptide chain release factor 2 [Streptococcus pneumoniae INV104] gi|327390112|gb|EGE88455.1| peptide chain release factor 2 [Streptococcus pneumoniae GA04375] gi|332076034|gb|EGI86500.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41301] gi|332202619|gb|EGJ16688.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41317] gi|332204764|gb|EGJ18829.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47901] Length = 325 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 149/325 (45%), Positives = 203/325 (62%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L N + ++++ + ILL+ E++ Sbjct: 1 MTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHDELVAQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 61 LAELD--KIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ +R+Q Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E K+ + + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQMEQDKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|319946614|ref|ZP_08020848.1| peptide chain release factor RF2 [Streptococcus australis ATCC 700641] gi|319746662|gb|EFV98921.1| peptide chain release factor RF2 [Streptococcus australis ATCC 700641] Length = 325 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 149/325 (45%), Positives = 207/325 (63%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L ++ D ++ ILLE +D S+ +E Sbjct: 1 MTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTDLFDESEILLEF--LSEDESVHEELE 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + + + LLS D+N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 59 EKLIELDKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAHG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GP+AYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q Sbjct: 179 EVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY+LE +K+ + + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGD+D F+ A L + Sbjct: 299 YEVAQVDKVMDGDIDGFIDAYLKWR 323 >gi|225868809|ref|YP_002744757.1| peptide chain release factor 2 [Streptococcus equi subsp. zooepidemicus] gi|225702085|emb|CAW99717.1| peptide chain release factor 2 [Streptococcus equi subsp. zooepidemicus] Length = 338 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 153/336 (45%), Positives = 214/336 (63%), Gaps = 2/336 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L K +P W + + A+ +E L +Q+ + L L + Sbjct: 1 MEEDIALLENKMTEPDFWNDNMAAQKTSQELNELKLTYQTFHNMQELSDETE--LYLEML 58 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 ++D S+ +E +L R+ + + LLS D ++A LE+H G+GGTE+QDWA+ML Sbjct: 59 DEDDSVKEELEASLTRLSQMLASYEMTLLLSEPYDHSNAILEIHPGSGGTEAQDWADMLF 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTR+ + FK E L+ G+EAGIKS TL I+GPNAYG+LK E GVHRLVRISP+DS Sbjct: 119 RMYTRFGNAKGFKVETLDYQAGDEAGIKSVTLSIEGPNAYGFLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSF S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG Sbjct: 179 AKRRHTSFVSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV +R+Q+ N+ +A ML+AKLY+LE +K+ E N + K EI WG QIRSYV Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQIRSYVFT 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E V+DGD++ F+ A L + Sbjct: 299 PYTMVKDHRTNFEVAQVDKVMDGDIEGFIDAYLKWR 334 >gi|307706955|ref|ZP_07643754.1| peptide chain release factor 2 [Streptococcus mitis SK321] gi|307617669|gb|EFN96837.1| peptide chain release factor 2 [Streptococcus mitis SK321] Length = 325 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 152/325 (46%), Positives = 210/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L N + ++++ + ILL+ +D S+ +E Sbjct: 1 MTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDF--LAEDESVHEELV 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 59 EQLSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ +R+Q Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|311739769|ref|ZP_07713603.1| peptide chain release factor RF2 [Corynebacterium pseudogenitalium ATCC 33035] gi|311304842|gb|EFQ80911.1| peptide chain release factor RF2 [Corynebacterium pseudogenitalium ATCC 33035] Length = 367 Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats. Identities = 152/353 (43%), Positives = 216/353 (61%), Gaps = 4/353 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + R+ L + DP LW + A+ + E + ++ Sbjct: 11 QLETTLTTIEKVMDPEALAARIRELEAQAGDPSLWDDPAHAQQVTSELSAAQAKVRKLES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D ++ EL ++ D L ++ +E + ++LSGE D +A + + Sbjct: 71 LRVRLEDMPVMYEL---AEEEGDTSLADDELDSLESAIESLEVTTMLSGEYDPREAVINI 127 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMYTRWAEK K + +I EEAGIKSAT ++ G YG L Sbjct: 128 RSGAGGVDAADWAEMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQL 187 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + I+I ++D R+D YR+SG GGQ Sbjct: 188 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDHIDIPDNDVRVDVYRSSGPGGQ 247 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + Q+ + + + Sbjct: 248 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEEQAELDALGA 307 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG Q+RSYVL PYQMVKDLRTN E PS VLDGD+D F+++ + + Sbjct: 308 G-GNASWGNQMRSYVLHPYQMVKDLRTNFEVGDPSKVLDGDIDGFLESGIRWR 359 >gi|146319066|ref|YP_001198778.1| peptide chain release factor 2 [Streptococcus suis 05ZYH33] gi|146321272|ref|YP_001200983.1| peptide chain release factor 2 [Streptococcus suis 98HAH33] gi|145689872|gb|ABP90378.1| Protein chain release factor B [Streptococcus suis 05ZYH33] gi|145692078|gb|ABP92583.1| Protein chain release factor B [Streptococcus suis 98HAH33] gi|292558711|gb|ADE31712.1| Peptide chain release factor 2 [Streptococcus suis GZ1] gi|319758505|gb|ADV70447.1| peptide chain release factor 2 [Streptococcus suis JS14] Length = 325 Score = 256 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 148/325 (45%), Positives = 202/325 (62%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + + A+ +E L N ++ D ++ ILL+ +D S+ E Sbjct: 1 MTEPDFWNDNLAAQKTSQELNELKNTYGNFHQMLDLYDESEILLDF--LAEDESVRDELV 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + + + LLS D N+A LE+H G+GGTE+QDW MLLRMY R+ + Sbjct: 59 EKLVELDKTMTAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGEMLLRMYQRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L+ G+EAGIKS TL GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FIVETLDYQAGDEAGIKSVTLSFTGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEIEI + + ++DT+R+ GAGGQ+VN + VR+THIPTG+V Q +R+Q Sbjct: 179 EVMPELDDTIEIEIRDDEVKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A +L+AKLY+LE +K+ + + K EI WG QIRSYV PY MVKD RT Sbjct: 239 YGNRDRAMKLLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYTMVKDHRTG 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|297181318|gb|ADI17509.1| protein chain release factor b [uncultured bacterium HF0130_06E03] Length = 325 Score = 256 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 154/325 (47%), Positives = 212/325 (65%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + A+ + ++ + +I + + + D L E+A + D S L + Sbjct: 1 MSDPSFWSDRKNAEKISKQARLFKESIEAWETLTSQHKDLCELQEMAAADGDESALSDLE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + + VE +F S+L G DS +A L +H+GAGGTE+ DWA MLLRMY RW E+ Sbjct: 61 NEVDELTKNVESFEFRSMLDGVDDSKNAILVIHSGAGGTEAADWAEMLLRMYNRWTERNG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 K++ ++I GEEAGIK T+ + G AYG+LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 121 LKSKVMDIQPGEEAGIKGVTIEVSGEYAYGYLKAEAGVHRLVRISPFDSGGRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 +VYP VDD IE+++ + D +I+ YRA GAGGQHVN T SAVRITH+PTG+VVQCQ ERSQ Sbjct: 181 FVYPDVDDDIEVDLKDEDLKIEVYRAGGAGGQHVNKTSSAVRITHVPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KNKA A +L A++Y+ + + E+SK I +G QIRSYV PY +VKD RTN Sbjct: 241 FKNKATALKVLTARVYQNIKDEENKKLKEVENSKKSIDFGSQIRSYVFHPYNLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGD+D F++A L ++ Sbjct: 301 YETGNVQAVMDGDIDKFIRAFLTLE 325 >gi|323126937|gb|ADX24234.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 327 Score = 256 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 148/325 (45%), Positives = 202/325 (62%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ + ++ L + +Q+ + + LE+ E+D E S Sbjct: 1 MTEPDFWNDNIAAQKISQKLNELKSTYETFHNMQELSDETELYLEMLEEDDSVKDDLEAS 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L LS D N+A LE+H G+GGTE+QDWA+ML RMYTR+ + Sbjct: 61 LETLGQILASYEMTLL--LSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG+LK E GVHRLVRISP+DS RRHTSF S+ Sbjct: 119 FKVETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFVSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q Sbjct: 179 EVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY+LE +K+ N + K EI WG QIRSYV PY MVKD RTN Sbjct: 239 YGNRDRAIKMLQAKLYQLEQEKKAAEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGD++ F+ A L + Sbjct: 299 YEVAQVDKVMDGDIEGFIDAYLKWR 323 >gi|117928939|ref|YP_873490.1| peptide chain release factor 2 [Acidothermus cellulolyticus 11B] gi|166223620|sp|A0LVP4|RF2_ACIC1 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|117649402|gb|ABK53504.1| bacterial peptide chain release factor 2 (bRF-2) [Acidothermus cellulolyticus 11B] Length = 369 Score = 256 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 148/347 (42%), Positives = 214/347 (61%), Gaps = 1/347 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L + + D + + L + DP LW + A+ + L I ++ + Sbjct: 13 LDTRLAGIEQVLDLPAMRREAADLERQAADPGLWNDPENAQRVTSRLSFLQAEIRRVEGL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D ++L ELA E+D E + ++ ++ + +LLSGE D+ +A + ++ Sbjct: 73 RKRLDDVMVLFELAEAENDEPTRTEALAEMAALQKAIDDLEVRTLLSGEYDAREALVTIN 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ DWA MLLRMY RWAE+ + TE L+ EEAGIKSAT ++ P YG L Sbjct: 133 SQAGGVDAADWAQMLLRMYLRWAERHGYPTEILDTSYAEEAGIKSATFIVHAPFTYGLLA 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ +RR TSF+ + V PVV+ + I+I E + R+D +R+SG GGQ Sbjct: 193 AEHGTHRLVRISPFDNQARRQTSFAGVDVVPVVEKTDHIDIPEDEIRVDVFRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV CQ ERSQ +N+A A +L+A+L E Q+ Sbjct: 253 VNTTDSAVRITHLPTGIVVTCQNERSQLQNRATAMMVLQARLLERRRQEEAAKLAALRGE 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 T WG QIR+YVL PYQ+VKDLRT +E ++ + VLDG++D+F+ A Sbjct: 313 -TTTSWGTQIRNYVLHPYQLVKDLRTEVETSNTAGVLDGEIDEFIDA 358 >gi|295100603|emb|CBK98148.1| bacterial peptide chain release factor 2 (bRF-2) [Faecalibacterium prausnitzii L2-6] Length = 373 Score = 256 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 147/352 (41%), Positives = 215/352 (61%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + L D + +R+ L P + + +K + E L ++ ++ Sbjct: 13 EYHTAVKDLEEALAIDASRKRVQELEHTMSRPGFYDDAELSKKVFDEVGDLKGKLNRFEK 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +Q D +L + EE D ++ E + + + V+ Q ++L+GE D ++A L Sbjct: 73 LQGLYDDAETMLVMLDEEYDPEMVPEAEEAVNAVGKAVDELQLMTMLNGEYDHSNAILTF 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAG GGTE+QDWA ML RMY +WA+ E L+ DG+EAG+KSA++++KG NAYG L Sbjct: 133 HAGTGGTEAQDWAEMLYRMYNKWAQAHGMTVEVLDYQDGDEAGMKSASMMVKGANAYGLL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVR+SP+D+N+RR TSF+S+ V P +D++I+++I D + YR+SGAGGQ Sbjct: 193 KSENGVHRLVRVSPFDANARRQTSFASLEVMPELDNTIQVDIRPEDIEMQVYRSSGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+N T SAVR+ H PTG+VV CQ +RSQ +N+ A ML+AKLY++ Q+ + + + Sbjct: 253 HINKTSSAVRLIHKPTGIVVSCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + EI WG QIRSYV PY MVKD RTN E + V+DGDLD F+ A L Sbjct: 313 VQNEIAWGHQIRSYVFMPYTMVKDHRTNYETGNVDAVMDGDLDGFIFAYLKA 364 >gi|302524557|ref|ZP_07276899.1| peptide chain release factor 2 [Streptomyces sp. AA4] gi|302433452|gb|EFL05268.1| peptide chain release factor 2 [Streptomyces sp. AA4] Length = 376 Score = 256 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 152/353 (43%), Positives = 222/353 (62%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ +L + + D + +++ L + P LW NV EA+ + + H + + E+ Sbjct: 21 LTGKLTQIESVMDLEALRAQVAELEEQASSPTLWDNVEEAQKVTSQLSHRQAELRRVSEL 80 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L ELA +E D + E +L + +++ + +LLSGE D +A + + Sbjct: 81 RQRLDDLGVLYELAADEGDSGSMTEAEGDLADLAKDIDALEVRTLLSGEYDDRNAVVNIR 140 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A MLLRMY RWAE+ + T+ +I EEAGIKSAT + P YG L Sbjct: 141 SEAGGVDAADFAEMLLRMYLRWAERHGYPTDVFDISYAEEAGIKSATFKVTAPYVYGTLS 200 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ SRR TSF+ + V P V++ ++I E D R+D YR+SG GGQ Sbjct: 201 VEQGTHRLVRISPFDNQSRRQTSFAHVEVLPEVEEVDHVDIPEKDIRVDVYRSSGPGGQS 260 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+A+L + + ++ + + Sbjct: 261 VNTTDSAVRLTHIPTGIVVSCQNEKSQLQNKAAAMKVLQARLLQRKKEEERAEMDALKDG 320 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F++A + +K Sbjct: 321 GS--SWGNQMRSYVLHPYQMVKDLRTEFEVGNPTAVLDGDIDGFLEAGIRWRK 371 >gi|188590075|ref|YP_001919915.1| peptide chain release factor 2 [Clostridium botulinum E3 str. Alaska E43] gi|188500356|gb|ACD53492.1| peptide chain release factor 2 [Clostridium botulinum E3 str. Alaska E43] Length = 344 Score = 256 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 160/343 (46%), Positives = 230/343 (67%), Gaps = 1/343 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 LFD + ++LS L + ++ W + A+ + +E + + + I ++ +Q +L D +L Sbjct: 3 LFDKEYLEKQLSELEFQMQEDGFWNDTKRAEEITKESKRIKDKIQRVESVQSKLDDIEVL 62 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+ ++D+ S + +N++ I+ E++ E LLSGE D N+A L +H G GGT++ D Sbjct: 63 KEMMDDDDEESAYE-IINNIKEIEEEIDNYNMEILLSGEYDKNNAILTLHVGVGGTDAND 121 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 W MLLRMYTRW EK+ +K E +++ +G+EAGIKS TL + G AYG+LK E+G+HRLVR Sbjct: 122 WTEMLLRMYTRWCEKKNYKVEVIDLLEGDEAGIKSVTLKVIGEYAYGYLKAEKGIHRLVR 181 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+++N +R TSF+S+ V P + +I+I D ++DTYRASGAGGQH+N TDSAVRI Sbjct: 182 ISPFNANGKRQTSFASMEVLPELTKEQDIDIRSEDIKVDTYRASGAGGQHINKTDSAVRI 241 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 THIPTGVVVQCQ ERSQ NK A ML+AKL EL+ + +E ++GWG QI Sbjct: 242 THIPTGVVVQCQNERSQFSNKDTAMGMLKAKLIELKERAHKEKIEDLTGELKDMGWGSQI 301 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 RSYV PY +VKD RTN+E ++ + V+DGDLD F+ + L K Sbjct: 302 RSYVFHPYNLVKDHRTNVEVSNVTAVMDGDLDLFINSYLKSSK 344 >gi|195977853|ref|YP_002123097.1| peptide chain release factor 2 [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225870173|ref|YP_002746120.1| peptide chain release factor 2 [Streptococcus equi subsp. equi 4047] gi|195974558|gb|ACG62084.1| peptide chain release factor 2 PrfB [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225699577|emb|CAW93198.1| peptide chain release factor 2 [Streptococcus equi subsp. equi 4047] Length = 338 Score = 256 bits (653), Expect = 4e-66, Method: Composition-based stats. Identities = 152/336 (45%), Positives = 215/336 (63%), Gaps = 2/336 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L K +P W + + A+ +E L ++Q+ + L L + Sbjct: 1 MEEDIALLENKMTEPDFWNDNMAAQKTSQELNELKLTYQTFHDMQELSDETE--LYLEML 58 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 ++D S+ +E +L ++ + + LLS D ++A LE+H G+GGTE+QDWA+ML Sbjct: 59 DEDDSVKEELEASLIKLSQMLASYEMTLLLSEPYDHSNAILEIHPGSGGTEAQDWADMLF 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTR+ + FK E L+ G+EAGIKS TL I+GPNAYG+LK E GVHRLVRISP+DS Sbjct: 119 RMYTRFGNAKGFKVETLDYQAGDEAGIKSVTLSIEGPNAYGFLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSF S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG Sbjct: 179 AKRRHTSFVSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV +R+Q+ N+ +A ML+AKLY+LE +K+ E N + K EI WG QIRSYV Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQIRSYVFT 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN E V+DGD++ F+ A L + Sbjct: 299 PYTMVKDHRTNFEVAQVDKVMDGDIEGFIDAYLKWR 334 >gi|148244437|ref|YP_001219131.1| peptide chain release factor RF-2 [Candidatus Vesicomyosocius okutanii HA] gi|146326264|dbj|BAF61407.1| peptide chain release factor RF-2 [Candidatus Vesicomyosocius okutanii HA] Length = 364 Score = 256 bits (653), Expect = 5e-66, Method: Composition-based stats. Identities = 170/352 (48%), Positives = 233/352 (66%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + L + RL + + EDP++W+N +A+ L RE+ L + +++ Sbjct: 13 LKKCSGTLSIHLNLKKKQYRLEEILLEMEDPNIWENPNQAQSLGREKSKLISICQTFEQV 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LL LA E+D ++L + +E +F+ + SG+ D+N AYL++ Sbjct: 73 NAILEDAQELLNLAQTENDTETANGIINDLDTAQSSIEKLEFKRMFSGDLDANSAYLDIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +G+GGTE+QDWA M+LRMY RW EK FK + +E+ GE AGIKSAT+ KG A+GWL+ Sbjct: 133 SGSGGTEAQDWAEMVLRMYLRWGEKHNFKIKLMEVSAGEVAGIKSATIHFKGEYAFGWLR 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+++N +RHTSF S++V P +D I+I+IS SD RIDTYRASGAGGQH Sbjct: 193 TEIGIHRLVRKSPFNANGKRHTSFCSVFVSPEIDSDIDIDISPSDLRIDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH+PT VVQCQ RSQH NK QA L++KLY+LE+QKR E S Sbjct: 253 VNKTESAVRITHLPTNTVVQCQNGRSQHANKNQAIKQLQSKLYKLEMQKRNTEKQSLEQS 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K++I WG QIRSY+L VKDLRT IE ++ ++L+G+LD FMKA+L + Sbjct: 313 KSDISWGHQIRSYILD-QSRVKDLRTGIESSNTQNILEGNLDQFMKASLKSR 363 >gi|54294665|ref|YP_127080.1| hypothetical protein lpl1742 [Legionella pneumophila str. Lens] gi|53754497|emb|CAH15981.1| hypothetical protein lpl1742 [Legionella pneumophila str. Lens] Length = 335 Score = 256 bits (653), Expect = 5e-66, Method: Composition-based stats. Identities = 175/330 (53%), Positives = 230/330 (69%), Gaps = 1/330 (0%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 + + E ++W N +A+ L RER L+ + + ++ + D L ELA EEDD Sbjct: 2 EEVIRELESSNVWDNPEQAQALGRERTQLETIVHSLSQLSQSISDQSELFELAREEDDEQ 61 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 + + + L+ I+ +V +F + SG+ D ++AYL++ AG+GGTE+QDWA MLLRMY R Sbjct: 62 TINDIGEELKSIEQQVASLEFRRMFSGKMDHSNAYLDIQAGSGGTEAQDWAEMLLRMYLR 121 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 W E F TE +E GE AGIKSAT+ G A+GWL+ E GVHRLVR SP+DS +RRH Sbjct: 122 WGEHHGFTTELIECSPGEVAGIKSATIHFTGEYAFGWLRTETGVHRLVRKSPFDSGNRRH 181 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TSF++++V P +DD IEIEI+ +D RIDTYRASGAGGQHVN TDSAVRITHIP+G+VVQC Sbjct: 182 TSFAAVFVSPEIDDDIEIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHIPSGIVVQC 241 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 Q +RSQHKNK QA LRAKLYELE+QK+ E+SK++IGWG QIRSYVL + Sbjct: 242 QNDRSQHKNKDQAMKQLRAKLYELEMQKKNAEQQALEASKSDIGWGSQIRSYVLD-QSRI 300 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KDLRT +E ++ VLDG LD F++A+L Sbjct: 301 KDLRTGVETSNTQAVLDGSLDQFIEASLKA 330 >gi|258591448|emb|CBE67749.1| Peptide chain release factor 2 (RF-2) [NC10 bacterium 'Dutch sediment'] Length = 334 Score = 256 bits (653), Expect = 5e-66, Method: Composition-based stats. Identities = 162/324 (50%), Positives = 223/324 (68%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 W + A+ +M+E++ L + + + I L D +LL L EE+D L+E Sbjct: 1 MLHSQEFWADTSRAREIMKEQRALKDVVDQLVAIGGELDDLAVLLGLLREEEDPQALKEL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 +L+ ++ ++ + + ++ E DS +A L ++ GAGGTESQDWA MLLRMY RWAE Sbjct: 61 ESSLRSLEGQIGALELTTFMAEEYDSGNAILSINPGAGGTESQDWAQMLLRMYLRWAETG 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 +KTE +++ EEAGIKSAT+ + G AYG LK E GVHRLVRISP+D+N RRHTSF+S Sbjct: 121 SYKTEIIDLLPAEEAGIKSATVTVSGKYAYGRLKAEIGVHRLVRISPFDANHRRHTSFAS 180 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 ++VYP +D++I++ I + D RIDTYR+SGAGGQHVN TDSAVRITH+PT +VV CQ ERS Sbjct: 181 VFVYPEIDETIDVAIDDKDLRIDTYRSSGAGGQHVNVTDSAVRITHLPTNIVVSCQNERS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QHKNKA A +LRA+LY+ +++E+ E K +I WG QIRSYVL PYQ+VKD RT Sbjct: 241 QHKNKAMAMKVLRARLYDHYRREQEKEMAKLEGEKKDIAWGSQIRSYVLAPYQLVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352 +E ++ VLDG+++ F+ A L Sbjct: 301 GLETSNVDKVLDGEIEPFIDAFLM 324 >gi|118444993|ref|YP_878978.1| peptide chain release factor 2 [Clostridium novyi NT] gi|118135449|gb|ABK62493.1| peptide chain release factor 2 [Clostridium novyi NT] Length = 337 Score = 256 bits (653), Expect = 5e-66, Method: Composition-based stats. Identities = 165/335 (49%), Positives = 230/335 (68%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 +RL L K ++ W ++ +A+ + +E + + + I + R+ D +L+E+++E Sbjct: 1 MEKRLGELEHKMQESDFWDDINKAQEITQEAKGIKDRIDGYNSTKTRIEDLEVLIEMSIE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E+D S ++E + ++ I+ ++ + E LLSGE D N+A + +H+GAGGT++QDW MLL Sbjct: 61 EEDESSIEEILNEVEEIESIIDNFKVEILLSGEYDKNNAIVTLHSGAGGTDAQDWTEMLL 120 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTRWAEKR +K + L+I G+EAGIKSA L I G AYG+LK E+G+HRLVRISP+++ Sbjct: 121 RMYTRWAEKRGYKVDVLDILPGDEAGIKSANLKITGEFAYGYLKAEKGIHRLVRISPFNA 180 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 N +R TSF+S+ V P + ++ +IEI D RIDTYRASGAGGQH+N TDSAVRITHIPTG Sbjct: 181 NGKRQTSFASLEVIPELKENQDIEIKADDLRIDTYRASGAGGQHINKTDSAVRITHIPTG 240 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VVQ Q ERSQ +NK A +ML++KL EL+ + +E EIGWG QIRSYV Q Sbjct: 241 IVVQSQSERSQFQNKDTAMSMLKSKLVELKERAHKEKIEDLSGDLKEIGWGSQIRSYVFQ 300 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 PY MVKD RTN E + V+DGD+D F+ L Sbjct: 301 PYTMVKDHRTNTEMGNVDAVMDGDIDIFILEYLKA 335 >gi|328955235|ref|YP_004372568.1| bacterial peptide chain release factor 2 (bRF-2) [Coriobacterium glomerans PW2] gi|328455559|gb|AEB06753.1| bacterial peptide chain release factor 2 (bRF-2) [Coriobacterium glomerans PW2] Length = 383 Score = 256 bits (653), Expect = 5e-66, Method: Composition-based stats. Identities = 143/355 (40%), Positives = 206/355 (58%), Gaps = 5/355 (1%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + +L + D +R+ L ++ P W + A+ +M E + +S ++ + Sbjct: 17 AARLCEVESYLHLDEKRERIVELEQRSARPDFWDDGERARAVMEELSCARDDVSGVERAR 76 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYL 119 RL D + L+LA E + E + E ++ + S +GE D A + Sbjct: 77 TRLADAVAALQLASELEHGDEADELAAEATAAASELTREIDQMELSSWFTGEFDHGSAII 136 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + G GG E+QDW ML +MY ++ E+R +K + + GI AT ++G +A+G Sbjct: 137 TIKPGQGGLEAQDWTFMLFKMYMKYCERRGWKVTVNDCPPADVIGIDRATFTVEGKDAFG 196 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L+ E GVHRLVRISP D RR T+F+ + V PV+ D I++EI +D R+D Y ASG G Sbjct: 197 MLRAEAGVHRLVRISPTDDKKRRQTTFAGVEVIPVLPDDIDVEIDPTDIRVDVYHASGPG 256 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA +L+++L+ELEL+KREE + Sbjct: 257 GQGVNTTDSAVRVTHLPTGIVVTCQNERSQIQNKAACMQILKSRLFELELEKREEALDEI 316 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAI 353 K IG+G QIRSYVL PYQMVKDLR+ +E + + VL DGDLD F+ Sbjct: 317 RGPKHTIGFGNQIRSYVLYPYQMVKDLRSGVETGNVASVLEDGDLDPFIIGYHRW 371 >gi|331695045|ref|YP_004331284.1| peptide chain release factor 2 [Pseudonocardia dioxanivorans CB1190] gi|326949734|gb|AEA23431.1| Peptide chain release factor 2 [Pseudonocardia dioxanivorans CB1190] Length = 369 Score = 256 bits (653), Expect = 5e-66, Method: Composition-based stats. Identities = 151/353 (42%), Positives = 220/353 (62%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ L + + D ++ L + P LW + A+ + H + + ++++ Sbjct: 12 LAGTLENIEAVVDLPALRVEIADLEEQAGQPDLWNDTETAQKVTSRLAHANGELRRVEDL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L ELA +E D S + + + ++ E+E + +LLSGE D +A + + Sbjct: 72 RRRLDDLPVLYELAEDEGDESAIADADRDRVALRAEIESLEVRTLLSGEYDEREALVTIR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A ML+RMY RWAE+ + + + EEAGIKSAT + P AYG L Sbjct: 132 SEAGGVDAADFAEMLMRMYLRWAERHGYGVDVYDTSYAEEAGIKSATFQVHAPYAYGTLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + I+I E D R+D YR+SG GGQ Sbjct: 192 VEQGTHRLVRISPFDNQGRRQTSFAGVEVAPVVESTDHIDIDEKDLRVDVYRSSGPGGQG 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A +L+AKL E + Q+ + + + + Sbjct: 252 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMVVLQAKLLERKRQEERALMDSLKDT 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQMVKDLRT+ E +P VLDGD+D F++A + ++ Sbjct: 312 GS--SWGNQMRSYVLHPYQMVKDLRTDFEVGNPGAVLDGDIDGFIEAGIRWRR 362 >gi|282891215|ref|ZP_06299718.1| hypothetical protein pah_c048o046 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498908|gb|EFB41224.1| hypothetical protein pah_c048o046 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 341 Score = 256 bits (653), Expect = 5e-66, Method: Composition-based stats. Identities = 157/335 (46%), Positives = 220/335 (65%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 + ++ L T+ E P W + A+ ++ E L ++++R + LL+ A Sbjct: 3 SKEAKVKALETEMEAPTFWDDNDAAQKVIAECNALKAWTIPYHDLKERYSNVSELLQEAF 62 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 + + S++QE + L I+ ++ + +L+GE DS +A+L ++AGAGGTE+ DW ML Sbjct: 63 DLGEESLIQELVEELDSIEASLKELEIRKMLAGELDSKNAFLSINAGAGGTEACDWVLML 122 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY RWA K+ +K E ++ DG+ AGIKS T GP AYG+ K E+GVHRLVRISP+D Sbjct: 123 SRMYQRWAAKKNWKVEVIDTVDGDVAGIKSITYKFTGPFAYGYAKAEKGVHRLVRISPFD 182 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 SN++RHTSF+S+ + P + D I+IEI D R+DT+RASGAGGQHVN TDSAVR+TH+PT Sbjct: 183 SNAKRHTSFASVDITPEITDDIQIEIRPEDLRVDTFRASGAGGQHVNRTDSAVRLTHLPT 242 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VV CQ +RSQ +NK + MLR+KLYE+E+ RE K EI WG QIR+YV Sbjct: 243 GIVVSCQAQRSQLQNKETCYKMLRSKLYEMEVTARENALKAMGGEKKEIAWGSQIRNYVF 302 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QPY +VKD RT +E + V+DG+LDDF+ A L Sbjct: 303 QPYTLVKDTRTKVECGNIQAVMDGELDDFVNAYLM 337 >gi|325679774|ref|ZP_08159348.1| peptide chain release factor 2 [Ruminococcus albus 8] gi|324108589|gb|EGC02831.1| peptide chain release factor 2 [Ruminococcus albus 8] Length = 378 Score = 256 bits (653), Expect = 5e-66, Method: Composition-based stats. Identities = 150/350 (42%), Positives = 230/350 (65%), Gaps = 3/350 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + L ++D +NA +++ L+ K +P W + ++++++++ ++L+ + + Sbjct: 20 IKELHDVYDIENAAEKIEELHEKAAEPGFWDDPEKSQVVLQQTRNLEGKVERYNKFNGAA 79 Query: 67 CDNLILLELALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 D +++E+A EED+ + + + L ++K +++ E+LL+GE D ++A L HA Sbjct: 80 DDIEVMIEMAGEEDEDTQAELVEEIKAELDKLKADLDAASLETLLTGEYDHSNAILNFHA 139 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+QDW ML+RMYT+WA+ F + ++I +G +AGIKS ++ I+G NAYG+LK Sbjct: 140 GAGGTEAQDWTEMLIRMYTKWADSHGFNAKIMDILEGGDAGIKSCSMFIEGENAYGYLKS 199 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G+HRLVRISP+DS+ RHTSFS++ V P +DD+IE+EI D ++ YRASGAGGQH+ Sbjct: 200 ESGIHRLVRISPFDSSGSRHTSFSAVEVMPELDDNIEVEIRPEDIEMEVYRASGAGGQHI 259 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SAVR+ H PTG+V CQ +RSQ +N+ A ML+AKL E++ ++ E + + Sbjct: 260 NKTSSAVRLIHKPTGIVTACQTQRSQFQNRDYAMKMLKAKLIEIKEREHLEKIEDIKGVQ 319 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 EI WG QIRSYV PY +VKDLRT E + V+DGDLD F+ A L Sbjct: 320 KEIAWGSQIRSYVFMPYTLVKDLRTGYEYNNVKAVMDGDLDGFINAYLKA 369 >gi|303327864|ref|ZP_07358304.1| peptide chain release factor 2 [Desulfovibrio sp. 3_1_syn3] gi|302862225|gb|EFL85159.1| peptide chain release factor 2 [Desulfovibrio sp. 3_1_syn3] Length = 366 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 160/348 (45%), Positives = 220/348 (63%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L GG+FD ++ QRL + T+ P W +++E++ L++ + + ++ Sbjct: 14 LTTFGGVFDVASSEQRLRDIETELSRPGAWDKPEALTPVLQEKRRLEDEVGRLTRLKTCR 73 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D L LA E +D L+ + + ++ + LLS E D DA LE+H GAG Sbjct: 74 DDMEEWLVLASENEDQEALESLEQQQKELAALLDETELVMLLSAEEDGQDAILEIHPGAG 133 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTESQDWA MLLR+YTRWA +RK+ E ++ G+EAGIKS TL I GP+A+G+LK E+G Sbjct: 134 GTESQDWAEMLLRLYTRWAARRKYAVEEMDFLPGDEAGIKSVTLRISGPHAFGFLKSERG 193 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRL+RISP+D++ RRHTSF+S+ V P + I+++I ESD R D +R+SG GGQ VNTT Sbjct: 194 IHRLIRISPFDASGRRHTSFASVDVIPDAGNDIQLDIKESDLRFDIFRSSGPGGQSVNTT 253 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+TH+PTG+ QCQ E+SQH NK A +LRA+LY LELQKRE + K I Sbjct: 254 SSAVRVTHLPTGISAQCQNEKSQHHNKETALRVLRARLYNLELQKREAERQAEYAGKDAI 313 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +G QIR+Y LQPY++VKD RT E VLDG +D F L + Sbjct: 314 AFGSQIRTYTLQPYRLVKDHRTGSESGDVDAVLDGQIDQFQHDYLLYR 361 >gi|306833909|ref|ZP_07467033.1| peptide chain release factor RF2 [Streptococcus bovis ATCC 700338] gi|304423910|gb|EFM27052.1| peptide chain release factor RF2 [Streptococcus bovis ATCC 700338] Length = 325 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 150/325 (46%), Positives = 203/325 (62%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L E+Q+ + + LE+ E+D E S Sbjct: 1 MTEPDFWNDNIAAQKTSQELNGLKQTYETFNEMQELSDETELYLEMLDEDDSVQAELEES 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + LLS D N+A LE+H G+GGTE+QDWA+ML RMYTR+ + Sbjct: 61 LEKLD--KIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADMLFRMYTRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSFSS+ Sbjct: 119 FKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFSSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q Sbjct: 179 EVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV PY MVKD RT Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTG 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGD+D F+ A L + Sbjct: 299 YEIAQVDKVMDGDIDGFIDAYLKWR 323 >gi|15594420|ref|NP_212208.1| peptide chain release factor 2 [Borrelia burgdorferi B31] gi|2687953|gb|AAC66459.1| peptide chain release factor 2 (prfB) [Borrelia burgdorferi B31] Length = 348 Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats. Identities = 150/347 (43%), Positives = 216/347 (62%), Gaps = 4/347 (1%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG FD + ++ + + W + A+ +++ + L N I +E+ +++ Sbjct: 3 KTFGGSFDKNEIQAKIEKYEKEINQKNFWNDPKRAQKVIKAQSILKNKIDPWEELINKIK 62 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L ++ ++ + + S E D+N+A+L +H+GAGG Sbjct: 63 DLSDL---CEIAENEKDTNGLEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGG 119 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DW ML RMY+R+AE++K+KTE +++ + E GIKS T+ IKG AYG LK E G+ Sbjct: 120 TEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGI 178 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRL+RISP+D+ +RHTSF+S++V PV+DD IEI I D RIDTYRASGAGGQHVN T Sbjct: 179 HRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEITIKPEDIRIDTYRASGAGGQHVNKTS 238 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHI TG+V Q Q +RSQHKNK A +L+++LYE K +E + +K EI Sbjct: 239 SAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEIS 298 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYV QPY +VKD RT E ++ + V+DG++D+F++ L K Sbjct: 299 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 345 >gi|256832101|ref|YP_003160828.1| peptide chain release factor 2 [Jonesia denitrificans DSM 20603] gi|256685632|gb|ACV08525.1| peptide chain release factor 2 [Jonesia denitrificans DSM 20603] Length = 369 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 147/354 (41%), Positives = 224/354 (63%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + +++ L+ + P LW + +A+ + N + I+ Sbjct: 11 QLRATLATISAVSDPEALTAKIAELSDQASAPDLWDDPAQAQQVTSALSLAQNELKRIES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +Q R+ D +L+E+A+E +D L E D IK +++ + +LLSGE D+ +A + + Sbjct: 71 MQQRIDDLEVLVEMAVEGNDADTLHEAEDEYAAIKKDLDQLEVRTLLSGEYDAREAVVTI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG ++ D+A MLLRMY RWAE+ + T L+ EEAG+KSAT +K P A+G L Sbjct: 131 RAGAGGVDAADFAEMLLRMYLRWAERHGYPTAVLDTSYAEEAGLKSATFEVKAPYAFGTL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+++ + +EI +++ R+D +R+SG GGQ Sbjct: 191 SVEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIEQTDHVEIPDNEIRVDVFRSSGPGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L LE Q E+ + Sbjct: 251 SVNTTDSAVRLTHIPTGIVVSMQNEKSQIQNRAAAMRVLQSRL-LLERQAEEKAKKKELA 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVLQPYQMVKDLRT E + + V DG +DDF++A + ++ Sbjct: 310 GDIKASWGDQMRSYVLQPYQMVKDLRTEHEVGNTNAVFDGHIDDFIEAGIRWRR 363 >gi|119947032|ref|YP_944712.1| peptide chain release factor 2 [Psychromonas ingrahamii 37] gi|119865636|gb|ABM05113.1| bacterial peptide chain release factor 2 (bRF-2) [Psychromonas ingrahamii 37] Length = 329 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 166/325 (51%), Positives = 222/325 (68%), Gaps = 1/325 (0%) Query: 28 TKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQE 87 + E P +W A+ L +ER L+ + I + D L+L+E+A EE+D E Sbjct: 3 RELESPEVWSEPERAQALGKERSALELVVDTIDALSAGTEDILMLVEMATEENDQDSFDE 62 Query: 88 TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 + ++ ++E +F + SG D+ YL++ +G+GGTE+QDWAN+LLRMY RW E Sbjct: 63 AQKEVNELEKKLEVLEFRRMFSGNHDACSCYLDIQSGSGGTEAQDWANILLRMYLRWGEA 122 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 +KTE +E+ G+ AGIK AT+ G A+GWL+ E GVHRLVR SP+DS+ RRHTSF+ Sbjct: 123 HGYKTELMEVSAGDVAGIKGATIRFTGEYAFGWLRTETGVHRLVRKSPFDSSGRRHTSFA 182 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 S ++YP ++D I+I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT +VVQCQ +R Sbjct: 183 SAFIYPEIEDDIDIQINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNIVVQCQNDR 242 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQHKNK QA L+AKLYE ELQK+ I E SK++IGWG QIRSYVL +KDLR Sbjct: 243 SQHKNKDQAMKQLKAKLYEHELQKQNAEKQISEDSKSDIGWGSQIRSYVLDD-ARIKDLR 301 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLA 352 T IE + VLDG LD F++A+L Sbjct: 302 TGIESRNTQAVLDGGLDKFIEASLK 326 >gi|326692249|ref|ZP_08229254.1| peptide chain release factor 2 [Leuconostoc argentinum KCTC 3773] Length = 333 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 148/326 (45%), Positives = 211/326 (64%), Gaps = 1/326 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL-ALEEDDCSILQET 88 + W + ++A+ ++ E L N + ++ + +L+E+ + + +D E Sbjct: 1 MTESGFWDDNVKAQKVIEENNILKNRRDSFLNLTNQAEEIAVLIEMLSEDPEDEDTAAEL 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + ++++++ +VE E LL+ D+N+A LEVH G+GGTES DW L RMYTRWA++ Sbjct: 61 AASVEKVQKDVEAYNLEQLLTEPYDANNAILEVHPGSGGTESTDWGANLYRMYTRWAQQH 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 F+ E L+ H G+EAGI SAT+ I G NAYG+L+ E+GVHR VRISP+DS RRHTSF S Sbjct: 121 GFQVEVLDYHAGDEAGIDSATIKISGHNAYGFLRSEKGVHRFVRISPFDSAGRRHTSFVS 180 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P +DD+IE+E+ + D ++D +R+ GAGGQ+VN + VR+TH PTG+VV ER+ Sbjct: 181 VDVMPELDDTIEVEVRDDDIKMDVFRSGGAGGQNVNKVSTGVRLTHEPTGIVVSSTVERT 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q+ N+ A +L+ KLY+LEL+K+ K E GWG QIRSYVL PYQMVKD RT Sbjct: 241 QYGNRDYAMRLLKGKLYQLELEKQAAERAALTGEKMENGWGSQIRSYVLHPYQMVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354 N E P VLDGDLD F+ A L + Sbjct: 301 NYETNQPQQVLDGDLDPFINAYLQWQ 326 >gi|325066934|ref|ZP_08125607.1| peptide chain release factor 2 [Actinomyces oris K20] Length = 373 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 145/357 (40%), Positives = 211/357 (59%), Gaps = 4/357 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + D + R++ L+ + P LW + A+++ H + ++ Sbjct: 11 RLRHTYASIAAVTDPEALRARIAELSEQASAPDLWDDPDSAQVVTSALSHAQADLKRVES 70 Query: 62 IQDRLCDNL---ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 + +R+ D L ED IL E +L I ++ + +LLSGE D DA Sbjct: 71 LGERIEDLEAMVELAGEEEGEDAAEILAEAETDLAAISKDLSDLEIRTLLSGEYDPRDAV 130 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + + +GAGG ++ D+A MLLRMYTRWAE+ + + L EEAG+KS T + P AY Sbjct: 131 ITIRSGAGGVDAADFAEMLLRMYTRWAERHDYPVKVLNTSYAEEAGLKSVTFEVHAPYAY 190 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G L E G HRLVRISP+D+ RR TSF+++ V P+++ + I+I E+D RID +R+SG Sbjct: 191 GTLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHIDIPETDIRIDVFRSSGP 250 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +N+A A +L+++L L+ Q+ + Sbjct: 251 GGQSVNTTDSAVRITHLPTGLVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQQEEDAKKKE 310 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQMVKDLRTN E +P V DGD+D F+ A + +K Sbjct: 311 LAGD-VKASWGDQMRSYVLNPYQMVKDLRTNFEVGNPDSVFDGDIDGFIDAGIRWRK 366 >gi|325287611|ref|YP_004263401.1| hypothetical protein Celly_2713 [Cellulophaga lytica DSM 7489] gi|324323065|gb|ADY30530.1| hypothetical protein Celly_2713 [Cellulophaga lytica DSM 7489] Length = 365 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 157/351 (44%), Positives = 224/351 (63%), Gaps = 2/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L L D D + + KT P W N A+ M+ Q + + Sbjct: 10 LLDRLGALRRYLDIDAKLIEIENEEEKTLAPDFWNNAQVAQAQMKVLQSKKKWVKDFDDA 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + D +LLE E D + ++ + K +E +F+++LS E D A L++ Sbjct: 70 KILIADLEVLLEFLKEGDVTAEE--VENHYNKAKTHIEDLEFKNMLSDEGDELTAILQIT 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA ML+RMY WAEK +K + L +G+ AGIK+ TL I+G A+GWLK Sbjct: 128 AGAGGTESCDWAAMLMRMYLMWAEKNGYKIKELNYQEGDVAGIKTVTLEIEGDYAFGWLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVRISP+DSN++RHTSF+S++VYP+ DDSIEIEI+ +D I T R+SGAGGQ+ Sbjct: 188 GENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDSIEIEINPADIEITTARSSGAGGQN 247 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++ V++TH PTG+ + C RSQH N+A A ML+++LYE+EL+K++E + E+ Sbjct: 248 VNKVETKVQLTHKPTGIQISCSDSRSQHDNRATAMKMLKSQLYEIELRKKQEARSEIEAG 307 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K +I WG QIR+YV+ PY++VKD+RT E + V+DG +D F+KA L + Sbjct: 308 KMKIEWGSQIRNYVMHPYKLVKDVRTAEETGNVDAVMDGQIDPFLKAYLMM 358 >gi|306829186|ref|ZP_07462376.1| peptide chain release factor RF2 [Streptococcus mitis ATCC 6249] gi|304428272|gb|EFM31362.1| peptide chain release factor RF2 [Streptococcus mitis ATCC 6249] Length = 325 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 152/325 (46%), Positives = 208/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L N + ++++ + ILL+ +D S+ E Sbjct: 1 MTEPDFWNDNIAAQKTSQELNELKNTYNTFCKMEELQDEVEILLDF--LAEDESVHDELV 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 59 EQLTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG VVQ +R+Q Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|227502940|ref|ZP_03932989.1| peptide chain release factor 2 [Corynebacterium accolens ATCC 49725] gi|227076362|gb|EEI14325.1| peptide chain release factor 2 [Corynebacterium accolens ATCC 49725] Length = 367 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 153/353 (43%), Positives = 216/353 (61%), Gaps = 4/353 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + R+ L + DP LW + A+ + E + ++ Sbjct: 11 QLDTTLTTIEKVMDPEALAARIRELEAQAGDPSLWDDPEHAQKVTSELSSAQAKVRKLES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D ++ ELA EE S+ E L + +E + ++LSGE D +A + + Sbjct: 71 LRGRLDDMPVMYELAEEEGTVSVADEDLAEL---ESAIESLEVTTMLSGEYDPREAVINI 127 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMYTRWA K K + +I EEAGIKSAT ++ G YG L Sbjct: 128 RSGAGGVDAADWAEMLMRMYTRWAGKHDHKVDIYDISYAEEAGIKSATFVVHGEYMYGQL 187 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVR+SP+D+ RR TSF+ + V PVV+ + I++ +++ R+D YR+SG GGQ Sbjct: 188 SVEQGAHRLVRLSPFDNQGRRQTSFAEVEVLPVVEQTDHIDVPDNEVRVDVYRSSGPGGQ 247 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + Q+ + + Sbjct: 248 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAELDALGA 307 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG Q+RSYVL PYQMVKDLRTN E PS VLDGD+D F++A + + Sbjct: 308 G-GNASWGNQMRSYVLHPYQMVKDLRTNFEMGDPSKVLDGDIDGFLEAGIRWR 359 >gi|166154673|ref|YP_001654791.1| peptide chain release factor 2 [Chlamydia trachomatis 434/Bu] gi|238687385|sp|B0B832|RF2_CHLT2 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|165930661|emb|CAP04158.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis 434/Bu] Length = 368 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 160/350 (45%), Positives = 211/350 (60%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L D + L L + W +V A + L +S E+ Sbjct: 12 LLEGLALTRRSLDPEGKENELKELEQQAVQDGFWDDVARAGKISERIARLKQQLSEFNEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++++ LE D + +E + ++ + LLSGE D N +L ++ Sbjct: 72 KNKVSTIQFFLEDEESSKDLEMQKELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DW M+LRMY RWA ++ E ++ DGE AGIK TL + G AYG+ K Sbjct: 132 AGAGGTESCDWVEMVLRMYMRWASSHSWRVEVIDRLDGEVAGIKHITLKLVGEYAYGYAK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DSN++RHTSF+S+ V+P +DD IE+EI D RIDTYR+SGAGGQH Sbjct: 192 AESGVHRLVRISPFDSNAKRHTSFASVEVFPEIDDKIEVEIHPGDIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSAVRITH PTG+VV CQ ERSQ +N+ NMLRA++Y+ LQ+R E NI + Sbjct: 252 VNVTDSAVRITHFPTGIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKN 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351 K EI WG QIR+YV QPY +VKD+RT E + ++DG+ LD F+KA L Sbjct: 312 KKEISWGSQIRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYL 361 >gi|52842005|ref|YP_095804.1| peptide chain release factor 2 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|148359322|ref|YP_001250529.1| peptide chain release factor 2 [Legionella pneumophila str. Corby] gi|296107369|ref|YP_003619069.1| Protein chain release factor B [Legionella pneumophila 2300/99 Alcoy] gi|52629116|gb|AAU27857.1| peptide chain release factor 2 (RF-2) [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|148281095|gb|ABQ55183.1| peptide chain release factor 2 (RF-2) [Legionella pneumophila str. Corby] gi|295649270|gb|ADG25117.1| Protein chain release factor B [Legionella pneumophila 2300/99 Alcoy] gi|307610478|emb|CBX00050.1| hypothetical protein LPW_18051 [Legionella pneumophila 130b] Length = 335 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 175/330 (53%), Positives = 230/330 (69%), Gaps = 1/330 (0%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 + + E ++W N +A+ L RER L+ + + ++ + D L ELA EEDD Sbjct: 2 EEVIRELESSNVWDNPEQAQALGRERTQLETIVHSLSQLSQSISDQRELFELAREEDDEQ 61 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 + + + L+ I+ +V +F + SG+ D ++AYL++ AG+GGTE+QDWA MLLRMY R Sbjct: 62 TINDIGEELKSIEQQVASLEFRRMFSGKMDHSNAYLDIQAGSGGTEAQDWAEMLLRMYLR 121 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 W E F TE +E GE AGIKSAT+ G A+GWL+ E GVHRLVR SP+DS +RRH Sbjct: 122 WGEHHGFTTELIECSPGEVAGIKSATIHFTGEYAFGWLRTETGVHRLVRKSPFDSGNRRH 181 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TSF++++V P +DD IEIEI+ +D RIDTYRASGAGGQHVN TDSAVRITHIP+G+VVQC Sbjct: 182 TSFAAVFVSPEIDDDIEIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHIPSGIVVQC 241 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 Q +RSQHKNK QA LRAKLYELE+QK+ E+SK++IGWG QIRSYVL + Sbjct: 242 QNDRSQHKNKDQAMKQLRAKLYELEMQKKNAEQQALEASKSDIGWGSQIRSYVLD-QSRI 300 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KDLRT +E ++ VLDG LD F++A+L Sbjct: 301 KDLRTGVETSNTQAVLDGSLDQFIEASLKA 330 >gi|326771885|ref|ZP_08231170.1| peptide chain release factor 2 [Actinomyces viscosus C505] gi|326638018|gb|EGE38919.1| peptide chain release factor 2 [Actinomyces viscosus C505] Length = 373 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 145/357 (40%), Positives = 211/357 (59%), Gaps = 4/357 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + D + R++ L+ + P LW + A+++ H + ++ Sbjct: 11 RLRHTYASIAAVTDPEALRARIAELSEQASAPDLWDDPDSAQVVTSALSHAQADLKRVES 70 Query: 62 IQDRLCDNL---ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 + +R+ D L ED IL E +L I ++ + +LLSGE D DA Sbjct: 71 LGERIEDLEAMVELAGEEEGEDAAEILAEAEMDLAAISKDLSDLEIRTLLSGEYDPRDAV 130 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + + +GAGG ++ D+A MLLRMYTRWAE+ + + L EEAG+KS T + P AY Sbjct: 131 ITIRSGAGGVDAADFAEMLLRMYTRWAERHDYPVKVLNTSYAEEAGLKSVTFEVHAPYAY 190 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G L E G HRLVRISP+D+ RR TSF+++ V P+++ + I+I E+D RID +R+SG Sbjct: 191 GTLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHIDIPETDIRIDVFRSSGP 250 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +N+A A +L+++L L+ Q+ + Sbjct: 251 GGQSVNTTDSAVRITHLPTGLVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQQEEDAKKKE 310 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQMVKDLRTN E +P V DGD+D F+ A + +K Sbjct: 311 LAGD-VKASWGDQMRSYVLNPYQMVKDLRTNFEVGNPDSVFDGDIDGFIDAGIRWRK 366 >gi|94969367|ref|YP_591415.1| peptide chain release factor 2 [Candidatus Koribacter versatilis Ellin345] gi|94551417|gb|ABF41341.1| bacterial peptide chain release factor 2 (bRF-2) [Candidatus Koribacter versatilis Ellin345] Length = 343 Score = 255 bits (652), Expect = 6e-66, Method: Composition-based stats. Identities = 166/332 (50%), Positives = 227/332 (68%), Gaps = 2/332 (0%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 + + + DP+LW N ++ +MRER+ L++A++ K++ R D +LA E +D + Sbjct: 2 AEVEKEAADPNLWGNPENSQRVMRERKRLEDALATDKDLSRRTDDITAYFDLAKEGEDIT 61 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 + +++ VE + E+LLSG++D A + +H GAGGTESQDWA MLLRMY R Sbjct: 62 ADLRR--EMDQLRDIVEKLETETLLSGDSDRLSAIVTIHPGAGGTESQDWAEMLLRMYLR 119 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 WAE++ F+T + GEEAG+KS T+ + G +AYG L E GVHRLVRISP+D RRH Sbjct: 120 WAERQGFETTVNDYQPGEEAGLKSVTITVAGQDAYGLLTSEIGVHRLVRISPFDQAKRRH 179 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TSF+S++V P +D+SIE+ + D R DTYR+ G GGQHVNTTDSAVRITH PTG+VV C Sbjct: 180 TSFASVFVSPEIDESIEVIVKPDDIRTDTYRSGGKGGQHVNTTDSAVRITHFPTGIVVSC 239 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 Q ERSQHKN+ +A +LR+K+YE EL+K+ + E SK +I +G QIRSYVL PY+MV Sbjct: 240 QNERSQHKNRERAMKILRSKIYEYELEKKRAASQKVEDSKLDIDFGSQIRSYVLHPYRMV 299 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 KD RT E P VLDGDL F++A L +++ Sbjct: 300 KDHRTKFEVGDPDRVLDGDLKGFIRAYLLMRR 331 >gi|254820379|ref|ZP_05225380.1| peptide chain release factor 2 [Mycobacterium intracellulare ATCC 13950] Length = 370 Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 163/356 (45%), Positives = 221/356 (62%), Gaps = 7/356 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R+ L + DP LW + A+ + E H + I+E+ Sbjct: 12 LDSTLTTVERVLDVDGLRARIEKLEREASDPQLWDDQTRAQRVTSELSHAQGELRRIEEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSGEADSNDAYLE 120 + RL D +L ELA EE + + + + + E+E + +LLSGE D +A + Sbjct: 72 RGRLDDLPVLYELAAEEGEGAAEALAEADAELKALQAEIEATEVRTLLSGEYDEREALVT 131 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + +GAGG ++ DWA ML+RMY RWAE+ K+ E + EEAGIKSAT + P AYG Sbjct: 132 IRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVELFDTSYAEEAGIKSATFAVHAPFAYGT 191 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+SG GG Sbjct: 192 LSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTTDSAVR+TH+PTG+VV CQ E+SQ +NK A +L+AKL E +KR E + Sbjct: 252 QSVNTTDSAVRLTHVPTGIVVTCQNEKSQLQNKISAMRVLQAKLLE---RKRSEERAELD 308 Query: 301 SSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + K E G WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F++A + + Sbjct: 309 ALKGEGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWR 364 >gi|167626878|ref|YP_001677378.1| peptide chain release factor 2 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596879|gb|ABZ86877.1| peptide chain release factor 2 [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 346 Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 176/346 (50%), Positives = 241/346 (69%), Gaps = 3/346 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 +N G +FD+D +RL+ + + ED +W N A+ L R++ L+N + + I + L Sbjct: 1 MNLYGTIFDYDVKKERLTEVLMELEDGSIWDNPEYAQNLGRQKVELENVVHNCEYISETL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 + L L E+D S++QE + + Q + E+E +F + SG+ D N+A+L++ +G+G Sbjct: 61 E--TLTELLELAEEDESLMQEIAKDTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSG 118 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWA ML+RMY RWA+ FK ++ DG+ AGIK TL ++G AYGWL+ E G Sbjct: 119 GTEAQDWAEMLMRMYMRWADSHGFKVTVDDVSDGDVAGIKGCTLKVEGEYAYGWLRTETG 178 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRLVR SP+DSNS+RHTSF+S+++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN T Sbjct: 179 IHRLVRKSPFDSNSKRHTSFASVFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKT 238 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIPT +VVQ Q +RSQHKN+ A L++KLYE+ELQKR N E SK +I Sbjct: 239 DSAVRITHIPTNIVVQSQSDRSQHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADI 298 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 GWG QIRSYVL +KDLRT +E T+ VLDGDLD F++A+L Sbjct: 299 GWGSQIRSYVLD-QSRIKDLRTGVENTNTQAVLDGDLDKFIEASLK 343 >gi|240168635|ref|ZP_04747294.1| peptide chain release factor 2 [Mycobacterium kansasii ATCC 12478] Length = 376 Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 160/357 (44%), Positives = 220/357 (61%), Gaps = 8/357 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D ++ L + DP LW + A+ + E H + ++++ Sbjct: 16 LDSTLTTVERVLDVDALRAKIDKLEHEASDPKLWDDQARAQRVTSELSHAQGELRRVEQL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYL 119 + RL D +L ELA EE+ + + ++ +K + +LLSGE D +A + Sbjct: 76 RSRLDDLPVLYELAAEEEGEAAAEALAEADAELKALHAEIEATEVRTLLSGEYDEREALV 135 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGG ++ DWA ML+RMY RWAE+ K+ E + EEAGIKSAT + P AYG Sbjct: 136 TIRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYG 195 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+SG G Sbjct: 196 TLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 255 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL E +KR E Sbjct: 256 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKLLE---RKRLEERAEL 312 Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 ++ K E G WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F++A + + Sbjct: 313 DALKGEGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWR 369 >gi|300781771|ref|ZP_07091625.1| peptide chain release factor RF2 [Corynebacterium genitalium ATCC 33030] gi|300533478|gb|EFK54539.1| peptide chain release factor RF2 [Corynebacterium genitalium ATCC 33030] Length = 364 Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 156/352 (44%), Positives = 217/352 (61%), Gaps = 4/352 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + L + + D D R L + DP LW + A+ + E + + ++ + Sbjct: 12 LEQTLTTIEKVMDLDEMDARARELEQQAADPSLWDDPEHAQSVTTELSSVQARVRRVRSL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D ++ ELA EE D ++ D L + VE + ++LSGE D +A + + Sbjct: 72 RQRIDDLPVMYELAAEEGDYTL---AEDELADLTTAVETLEVTTMLSGEYDQREAVVNIR 128 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ DWA ML+RMY RWAEK K + +I EEAGIKSAT ++ G YG L Sbjct: 129 SGAGGVDAADWAEMLMRMYIRWAEKNGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQLS 188 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + I+I +S+ RID YR+SG GGQ Sbjct: 189 VEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEKTDHIDIPDSEIRIDVYRSSGPGGQS 248 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH PTG+VV CQ E+SQ +NKA A N+L++KL E + Q+ + + + Sbjct: 249 VNTTDSAVRITHEPTGIVVTCQNEKSQIQNKASAMNVLQSKLLERKRQEEKAELDALGAG 308 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG Q+RSYVL PYQMVKDLRTN E P VLDGD+D F+++ + + Sbjct: 309 -GNASWGNQMRSYVLHPYQMVKDLRTNYEVGDPQKVLDGDIDGFLESGIRWR 359 >gi|297171258|gb|ADI22265.1| protein chain release factor B [uncultured Gemmatimonadales bacterium HF0200_36I24] gi|297171357|gb|ADI22361.1| protein chain release factor B [uncultured nuHF2 cluster bacterium HF0500_02A10] Length = 334 Score = 255 bits (651), Expect = 7e-66, Method: Composition-based stats. Identities = 163/324 (50%), Positives = 222/324 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 W N +A ++ E L N + ++ ++ + + +L EDD + E Sbjct: 1 MATAGFWDNQDKASEVIAESNRLKNWVKPWHDLNTKVSELTEIRDLLEHEDDEDLTHELI 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + +I+ +E + ++L G D A L VH GAGG ESQDWA ML RMY+RWAE Sbjct: 61 SEVDKIEGPIEDLELRTMLQGPDDHRGAILTVHPGAGGLESQDWAEMLTRMYSRWAENHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + L++ G+EAGIKSATL + G +AYG+LK E+G+HRLVRISP+D+ SRRHTSF+S+ Sbjct: 121 YDLNVLDMQPGDEAGIKSATLEVVGGHAYGYLKAEKGIHRLVRISPFDAQSRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 ++YP+VDD IEIEI+ESD R+DT+RASGAGGQHVN TDSA+RITHIPTG+ V CQQERSQ Sbjct: 181 FIYPLVDDEIEIEIAESDLRVDTFRASGAGGQHVNKTDSAIRITHIPTGIAVSCQQERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H N+A A ML+A LYE L+++E+ E++KT+IGWG QIRSYV QPY MV D RT+ Sbjct: 241 HMNRATAMKMLQASLYERALEEKEQEKEAIEATKTDIGWGNQIRSYVFQPYTMVNDHRTD 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 ++ + + V+DG+LD F++A L Sbjct: 301 LKISDVNKVMDGNLDPFIEAYLKQ 324 >gi|145593537|ref|YP_001157834.1| peptide chain release factor 2 [Salinispora tropica CNB-440] gi|189040004|sp|A4X3K6|RF2_SALTO RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|145302874|gb|ABP53456.1| bacterial peptide chain release factor 2 (bRF-2) [Salinispora tropica CNB-440] Length = 373 Score = 255 bits (651), Expect = 8e-66, Method: Composition-based stats. Identities = 161/355 (45%), Positives = 220/355 (61%), Gaps = 5/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D + L P LW + A+ + + +++ I+ + E+ Sbjct: 13 LDATLRNIESVLDIDRLRADKARLEEAASAPDLWDDQARAQQVTSQLSYVNGEINKLAEL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +LLELA E D L E + + ++ + +LLSGE DS +A + + Sbjct: 73 RSRLDDAKVLLELAEAESDPGALTEVEAEVAGLAKAIDEMEVRTLLSGEYDSREALVAIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A MLLRMY RWAE+ + TE E EEAG+KSAT +K P AYG L Sbjct: 133 AGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFTVKVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+ + V PVV+ + I+I E++ R D YR+SG GGQ Sbjct: 193 VESGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIDIPENEMRFDVYRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV CQ E+SQ +NKA A +L+A+L E +KR+E + Sbjct: 253 VNTTDSAVRITHIPTGIVVTCQNEKSQLQNKASALRVLQARLLE---RKRQEEQAKLQGL 309 Query: 303 KTEI--GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 KT+ WG Q+RSYVL PYQMVKDLRT E +P+ V DG+LD F++A + +K Sbjct: 310 KTDAAGSWGDQMRSYVLHPYQMVKDLRTEQETGTPAAVFDGELDAFIEAGIRWRK 364 >gi|78356848|ref|YP_388297.1| peptide chain release factor 2 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219253|gb|ABB38602.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 358 Score = 255 bits (651), Expect = 8e-66, Method: Composition-based stats. Identities = 170/351 (48%), Positives = 227/351 (64%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 M S L GG FD + RL + + P W + ++RE+ L+N+++ + Sbjct: 1 MPFSSSLKRSGGAFDHAQSKYRLEEIEKQLSSPDAWNAPEKLTPVLREKSQLENSVARLD 60 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 ++ D LELA EE+ +L++ + ++ +E + LLS E D + A LE Sbjct: 61 ALRQAKDDMQGWLELAEEENTQEVLEQLEEQAGILEALLEETEVGLLLSAEEDKHAAILE 120 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +H GAGGTE+QDWA MLLRMY RWAE +FK E L+ DG+EAGIKS TL I G NAYG Sbjct: 121 IHPGAGGTEAQDWAEMLLRMYVRWAESHEFKAEYLDYLDGDEAGIKSVTLKIDGTNAYGL 180 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LKGE+G+HRL+RISPYD++ RRHTSF+S+ V P + I I+I +SD RID +R+SG GG Sbjct: 181 LKGEKGIHRLIRISPYDASGRRHTSFASVDVIPDAGEEITIDIKDSDLRIDIFRSSGPGG 240 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTT SAVR+THIPTG+ QCQ E+SQH NK A +LRA+LYE E+++R+ Sbjct: 241 QSVNTTSSAVRVTHIPTGITAQCQNEKSQHHNKETAMQILRARLYEAEIRRRDAEKQADY 300 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +SK IGWG QIR+Y LQPY++VKD R+N E VLDG+LD M+ L Sbjct: 301 ASKEAIGWGSQIRTYTLQPYRLVKDHRSNFEVGDVEAVLDGELDALMRNHL 351 >gi|220905200|ref|YP_002480512.1| hypothetical protein Ddes_1938 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869499|gb|ACL49834.1| hypothetical protein Ddes_1938 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 370 Score = 255 bits (651), Expect = 8e-66, Method: Composition-based stats. Identities = 159/352 (45%), Positives = 223/352 (63%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+++ L G D + +RL + T+ P W L++E++ L++ ++ + ++ Sbjct: 14 LAQRFASLWGRLDVAASEKRLQAIETEISRPGAWDKPEALTPLLQEKRRLEDEVARLNKL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L LA E +D L+ + + + ++ + LLS E DS DA LE+H Sbjct: 74 KTCHDDMNEWLALAAESEDPEALESLAQQQKDLAALLDETELVMLLSAEEDSQDAILEIH 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA MLLRMYTRWA +K E L+ G+EAG+KS TL + GP+A+G+LK Sbjct: 134 PGAGGTESQDWAEMLLRMYTRWAADHDYKVEELDFLPGDEAGVKSVTLRVGGPHAFGFLK 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+G+HRL+RISP+DS+ RRHTSF+S+ V P D IE+++ E+D R+D +R+SG GGQ Sbjct: 194 SERGIHRLIRISPFDSSGRRHTSFASVDVIPDAGDDIELDLKEADLRVDIFRSSGPGGQS 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT SAVRITHIP+G+ QCQ E+SQH NK A +LRA+LY +EL+KRE + Sbjct: 254 VNTTSSAVRITHIPSGISAQCQNEKSQHHNKETALRVLRARLYNMELEKREAARQAQYAG 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K I +G QIR+Y LQPY++VKD RT E VLDG +D F L + Sbjct: 314 KDAIAFGSQIRTYTLQPYRLVKDHRTGTEVGDVDAVLDGQIDAFQHDYLLHR 365 >gi|323697942|ref|ZP_08109854.1| peptide chain release factor 2 [Desulfovibrio sp. ND132] gi|323457874|gb|EGB13739.1| peptide chain release factor 2 [Desulfovibrio desulfuricans ND132] Length = 372 Score = 255 bits (651), Expect = 8e-66, Method: Composition-based stats. Identities = 163/344 (47%), Positives = 218/344 (63%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 L G D+ RL + + P W N L++E+ L + + + Sbjct: 19 ESLWGRLDYAETKTRLDAIEKEISKPGAWDNPEALTPLLKEKSQLSTKLEMYDGLSEAKD 78 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D LELA E+ D L + + ++ + + ++ + E D DA LE+H GAGG Sbjct: 79 DLDAWLELAQEDPDEESLSALNAQVALLRERLAGTELATMFAFEHDKGDAILEIHPGAGG 138 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 ESQDWA MLLRMY R+AE++ FK L+ GEEAG+KS TL I+G AYG LKGE GV Sbjct: 139 VESQDWAEMLLRMYYRYAERKGFKVTQLDYQAGEEAGLKSVTLQIEGLFAYGLLKGETGV 198 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRL+RISP+DS+ RRHTSF+S+ VYP +D++IEIE+ + D RIDT+R+SG GGQ VN T Sbjct: 199 HRLIRISPFDSSGRRHTSFASVDVYPDMDENIEIEVKDEDLRIDTFRSSGPGGQSVNKTS 258 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTG+V QCQ E+SQH+NKA A +++A+LYE EL+K EE +K I Sbjct: 259 SAVRITHIPTGIVAQCQNEKSQHRNKATALRLVKARLYERELKKIEESRRQDYQAKDAIA 318 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG QIR+Y LQPY++VKD R+N E + LDGDLD+ ++ L Sbjct: 319 WGSQIRTYTLQPYRLVKDHRSNCESGNVDAFLDGDLDEMIRNYL 362 >gi|124515298|gb|EAY56808.1| Peptide chain release factor 2 [Leptospirillum rubarum] Length = 370 Score = 255 bits (651), Expect = 8e-66, Method: Composition-based stats. Identities = 169/346 (48%), Positives = 234/346 (67%), Gaps = 5/346 (1%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD D L ++ +++ P W++ A+ ++RE+ L+ +S I+ I+ D Sbjct: 11 GGIFDADRLKVTLEQIDAQSQSPEFWKDSDRARKMLREKSRLEKRLSLIQGIEKEDADIR 70 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L ELA + D + L V+ + E +LS N A+LE+H GAGGTES Sbjct: 71 ALFELASDPDFLAELSRRVPEFS---ESVKAFELEEILSDAKSDNPAFLEIHPGAGGTES 127 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMY RWAE+ E ++I GEEAGIKSAT+L++G +A+G+L E G+HRL Sbjct: 128 QDWAQMLLRMYIRWAERHGMTVEVIDIQSGEEAGIKSATILVRGEHAFGYLMSESGIHRL 187 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+D+N RRHTSF+S++VYP ++D I +EI + D RIDT+RAS AGGQHVN T SA+ Sbjct: 188 VRISPFDANKRRHTSFTSVFVYPELEDDIPVEIRDEDIRIDTFRASSAGGQHVNKTSSAI 247 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES--SKTEIGW 308 R+TH+PTG+V+ Q ERSQ +N+ A+ +LRAKLYELE ++++E + +K EIGW Sbjct: 248 RLTHLPTGIVISSQNERSQLQNREMAFKVLRAKLYELEEKRKKEELDKISGAQNKKEIGW 307 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 G QIRSYVLQPYQ++KD RT +E S+VLDGDLD F++ L + Sbjct: 308 GHQIRSYVLQPYQLIKDHRTGLETGKVSEVLDGDLDMFIRGYLLAR 353 >gi|322392321|ref|ZP_08065782.1| peptide chain release factor RF2 [Streptococcus peroris ATCC 700780] gi|321144856|gb|EFX40256.1| peptide chain release factor RF2 [Streptococcus peroris ATCC 700780] Length = 325 Score = 255 bits (651), Expect = 8e-66, Method: Composition-based stats. Identities = 148/325 (45%), Positives = 203/325 (62%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L + + ++ + + ILL+ E++ Sbjct: 1 MTEPDFWNDNIAAQKTSQELNELKHTYNTFHKMDELQDEVEILLDFLAEDESVKDELVEK 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 61 LDELA--QMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RTN Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTN 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|154253713|ref|YP_001414537.1| peptide chain release factor 2 [Parvibaculum lavamentivorans DS-1] gi|154157663|gb|ABS64880.1| peptide chain release factor 2 [Parvibaculum lavamentivorans DS-1] Length = 322 Score = 255 bits (651), Expect = 8e-66, Method: Composition-based stats. Identities = 208/309 (67%), Positives = 245/309 (79%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRER L+ AI + ++ L DNL L+E+ E D +I+ E L+ + + E Sbjct: 2 MRERTRLEEAIGRYRALEASLNDNLELIEMGEAEGDAAIVAEAEAALKAARDVAAEAEIE 61 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD+ND Y+E+HAGAGGTESQDWA MLLRMYTRWAE++ +K E +E HDGEEAGI Sbjct: 62 TLLSGEADANDTYVEIHAGAGGTESQDWAQMLLRMYTRWAERKGYKVELMERHDGEEAGI 121 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+L+KG NA+GWLK E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD I+IE+SE Sbjct: 122 KSATILVKGHNAFGWLKTESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDKIDIEVSE 181 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VV CQ ERSQHKN+A AW+MLRA+LY Sbjct: 182 ADVRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVACQNERSQHKNRATAWDMLRARLY 241 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E ELQKRE+ A S KT+IGWG QIRSYVLQPYQMVKDLRT +E + VL GDLD Sbjct: 242 EAELQKREDAAAAQASGKTDIGWGHQIRSYVLQPYQMVKDLRTGVETSDTDGVLGGDLDP 301 Query: 346 FMKATLAIK 354 FM A LA + Sbjct: 302 FMAAALAAR 310 >gi|284029674|ref|YP_003379605.1| peptide chain release factor 2 [Kribbella flavida DSM 17836] gi|283808967|gb|ADB30806.1| peptide chain release factor 2 [Kribbella flavida DSM 17836] Length = 373 Score = 255 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 146/354 (41%), Positives = 215/354 (60%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D D + ++ L + P LW + A+ + L + + Sbjct: 12 QLDATLTSIEKVLDLDALRREIADLGEQVAAPDLWDDQANAQKVTSRLSSLQADVERVTN 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ R+ D +++EL+ EE+D L E+ + + ++ + +LLSGE D +A + + Sbjct: 72 LRSRIDDLGVMIELSREENDADSLAESEKEIAALAKSIQSLEVRTLLSGEYDEREALVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A ML RMY RWAE+ + TE + EEAG+KS T +K P AYG L Sbjct: 132 RSGAGGVDAADFAEMLQRMYLRWAERHGYPTEVYDTSYAEEAGLKSTTFGVKAPYAYGTL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V PV++ + EI++ E + RID YR+SG GGQ Sbjct: 192 SVESGTHRLVRISPFDNQGRRQTSFAAVEVVPVLEQTDEIDVPEEELRIDVYRSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PTG VV CQ E+SQ +NKA A +L+AKL L+ + + Sbjct: 252 SVNTTDSAVRITHLPTGTVVSCQNEKSQLQNKASAMVILKAKLLALKKAEERAQIDALRG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQMVKDLRT E + S V DG++DDF++A + ++ Sbjct: 312 D-VQGSWGDQMRSYVLHPYQMVKDLRTQYESGNTSGVFDGEIDDFVEAGIRWRR 364 >gi|166155548|ref|YP_001653803.1| peptide chain release factor 2 [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|238687484|sp|B0BC97|RF2_CHLTB RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|165931536|emb|CAP07112.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 368 Score = 255 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 160/350 (45%), Positives = 211/350 (60%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L D + L L + W +V A + L +S E+ Sbjct: 12 LLEGLALTRRSLDPEGKENELKELEQQAVQDGFWDDVARAGKISERIARLKQQLSEFNEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++++ LE D + +E + ++ + LLSGE D N +L ++ Sbjct: 72 KNKVSTIQFFLEDEESSKDLEMQKELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DW M+LRMY RWA ++ E ++ DGE AGIK TL + G AYG+ K Sbjct: 132 AGAGGTESCDWVEMVLRMYMRWASSHSWRVEVIDRLDGEVAGIKHITLKLVGEYAYGYAK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DSN++RHTSF+S+ V+P +DD IE+EI D RIDTYR+SGAGGQH Sbjct: 192 AESGVHRLVRISPFDSNAKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSAVRITH PTG+VV CQ ERSQ +N+ NMLRA++Y+ LQ+R E NI + Sbjct: 252 VNVTDSAVRITHFPTGIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKN 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351 K EI WG QIR+YV QPY +VKD+RT E + ++DG+ LD F+KA L Sbjct: 312 KKEISWGSQIRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYL 361 >gi|225450605|ref|XP_002277995.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 434 Score = 255 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 159/352 (45%), Positives = 231/352 (65%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++ ++ + W V RL L+ + P LW N + A + RE L + +K + Sbjct: 72 IALSIHLIKKRLQWKKLVVRLDVLSAQLNKPDLWDNPVHAGKISREHGMLMGKMKGVKNL 131 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L +++ +++LA EE+D + E+ L ++ + K+ E+LL+G+ DS Y+EV Sbjct: 132 EQELLEHIDMVKLAREENDPELESESLKALLGMRRNSKEKELEALLAGDHDSCSCYIEVQ 191 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA M+++MY WA++R + ++ GE AGIK AT+ + G ++G+ K Sbjct: 192 AGAGGTESMDWAAMVMQMYKMWAQRRGYGVTVVDEMPGETAGIKRATIKVDGEYSFGYAK 251 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVRISP+DS RRHTSF+++ V P+ D S ++I+ESD RI+ +RA GAGGQ Sbjct: 252 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDASSHVQINESDLRIERFRAGGAGGQ 311 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTT+SAVRI HIPTGV CQ ERSQH+NKA A +L+++L +LE+ ++ +I Sbjct: 312 HVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQLEISRQAQINAQHTQ 371 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 S T+I WG QIR+YVL PY+MVKDLRTN E + P VL+GDLD F+ + L+ Sbjct: 372 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSA 423 >gi|206601601|gb|EDZ38084.1| Peptide chain release factor 2 [Leptospirillum sp. Group II '5-way CG'] Length = 370 Score = 255 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 167/346 (48%), Positives = 233/346 (67%), Gaps = 5/346 (1%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD D L ++ +++ P W++ A+ ++RE+ L+ +S I+ I D Sbjct: 11 GGIFDADRLKVTLEQIDAQSQSPEFWKDSDRARKMLREKSRLEKRLSLIQGIDREDADIR 70 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L ELA + D + L V+ + E +LS N A+LE+H GAGGTES Sbjct: 71 ALFELASDPDFLAELSRRVPEFS---ESVKAFELEEILSEAKSDNPAFLEIHPGAGGTES 127 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMY RWAE+ E ++I GEEAGIKSAT+L++G +A+G+L E G+HRL Sbjct: 128 QDWAQMLLRMYIRWAERHGMTVEVIDIQSGEEAGIKSATILVRGEHAFGYLMSESGIHRL 187 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+D+N RRHTSF+S++VYP ++D + +EI + D RIDT+RAS AGGQHVN T SA+ Sbjct: 188 VRISPFDANKRRHTSFTSVFVYPELEDDVPVEIRDEDIRIDTFRASSAGGQHVNKTSSAI 247 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES--SKTEIGW 308 R+TH+PTG+V+ Q ERSQ +N+ A+ +LRAKLYELE ++++E + +K +IGW Sbjct: 248 RLTHLPTGIVISSQNERSQLQNREMAFKVLRAKLYELEEKRKKEELDKISGAQNKKDIGW 307 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 G QIRSYVLQPYQ++KD RT +E S+VLDGDLD F++ L + Sbjct: 308 GHQIRSYVLQPYQLIKDHRTGLETGKVSEVLDGDLDMFIRGYLLAR 353 >gi|256826989|ref|YP_003150948.1| peptide chain release factor 2 [Cryptobacterium curtum DSM 15641] gi|256583132|gb|ACU94266.1| peptide chain release factor 2 [Cryptobacterium curtum DSM 15641] Length = 364 Score = 255 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 146/350 (41%), Positives = 206/350 (58%), Gaps = 2/350 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + +L D QRL+ L+ +T P W ++ A+ + +E + + + Sbjct: 11 AERLTEAHSFLHIDARKQRLAELDQQTAQPGFWDDIDRAQAVSKEASDIRTLLDTYEHAH 70 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D L+LA ++ D + + + + L + + ES D D + ++ Sbjct: 71 TLLDDWRCALDLAQDDPDFATEAQKAADELSRLL--DDFEIESWFGNRFDEGDCIVTINP 128 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GG E+QDW +ML MYT++AE R +K L+ GE GI+ A+ I+G AYG L+ Sbjct: 129 GSGGLEAQDWCDMLFHMYTKYAENRGWKVRVLDAPLGEVIGIEHASFQIEGRFAYGMLRS 188 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVRISP D RRHT+F+S+ V PV+ D IE+ ++ +D R+D YRASG GGQ V Sbjct: 189 EIGVHRLVRISPTDDKKRRHTTFASVEVMPVLPDDIEVNLNPADVRVDVYRASGPGGQCV 248 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSAVR+THIPTG VV CQ ++SQ +NK A+ +LRA+L+ELE +KR+E K Sbjct: 249 NTTDSAVRLTHIPTGTVVTCQNQKSQLQNKEAAFRILRARLFELEERKRQEEIEALRGEK 308 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 E +G QIR+YVL PYQMVKDLR+ IE + VL GDLD F+ Sbjct: 309 RENSFGSQIRNYVLYPYQMVKDLRSGIETGNVDAVLGGDLDQFVIGYHRW 358 >gi|327459899|gb|EGF06239.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1057] Length = 325 Score = 255 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 147/325 (45%), Positives = 204/325 (62%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ ++ L ++ + ++ ILL+ E++ E Sbjct: 1 MTEPDFWDDNIAAQKTSQDLNELKQTYENFHQMTELFDESEILLDFLAEDESVQGELEEK 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + LLS D+N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 61 LAELEK--MMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GP+AYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ +R+Q Sbjct: 179 EVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY+LE +K+ + + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|227549373|ref|ZP_03979422.1| peptide chain release factor 2 [Corynebacterium lipophiloflavum DSM 44291] gi|227078558|gb|EEI16521.1| peptide chain release factor 2 [Corynebacterium lipophiloflavum DSM 44291] Length = 365 Score = 255 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 151/352 (42%), Positives = 216/352 (61%), Gaps = 4/352 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R L + DP LW + A+ + E ++ + + + Sbjct: 12 LDSTLTTIEKVIDLDELAARARELEQQANDPSLWDDPAHAQKVTTELSNVQARLKKVASL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++R+ D ++ EL ++ D L ++ + + +++LSGE D +A + + Sbjct: 72 RERIDDLPVMYEL---AEEEGEPALVDDELAALEESIGSLEVQTMLSGEYDEREAVVNIR 128 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ DWA ML+RMYTRWAEK K E +I EEAGIKSAT +++G YG L Sbjct: 129 SGAGGVDAADWAEMLMRMYTRWAEKNGHKVEVYDISYAEEAGIKSATFVVRGEYMYGQLS 188 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + I+I +SD R+D YR+SG GGQ Sbjct: 189 VEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDHIDIPDSDIRVDVYRSSGPGGQS 248 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV CQ E+SQ +NKA A +L++KL E + Q+ + + + Sbjct: 249 VNTTDSAVRITHLPTGIVVTCQNEKSQIQNKASALGVLQSKLLERKRQEEKAEMDALGAG 308 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG Q+RSYVL PYQMVKDLRTN E P VLDGD+D F+++ + + Sbjct: 309 -GNASWGNQMRSYVLHPYQMVKDLRTNYEVGDPQKVLDGDIDGFLESGIRWR 359 >gi|116074014|ref|ZP_01471276.1| peptide chain release factor 2 [Synechococcus sp. RS9916] gi|116069319|gb|EAU75071.1| peptide chain release factor 2 [Synechococcus sp. RS9916] Length = 356 Score = 255 bits (650), Expect = 9e-66, Method: Composition-based stats. Identities = 145/341 (42%), Positives = 204/341 (59%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD R L P W + A+ MR + + + + + + D Sbjct: 3 RTVFDVPALKARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAQLEQLNQWKRAVDDAD 62 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +EL E D +L E L +++ E++ + E LLSGE D A L ++AGAGGT++ Sbjct: 63 ATVELYALEPDDDMLGEAQTGLTQLRTELDRWELERLLSGEYDKEGAVLSINAGAGGTDA 122 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA ML+RMYTRWAE K E+ +GEEAGIKS T+ I+G AYG+L+ E+G HRL Sbjct: 123 QDWALMLMRMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRL 182 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+++N +R TSF+ + V P +++ ++++I E D I T R+ GAGGQ+VN ++AV Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKIEEDVQLDIPEKDLEITTSRSGGAGGQNVNKVETAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RI HIPTG+ V+C QERSQ +NK +A +L AKL + ++R E WG Sbjct: 243 RILHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIR+YV PYQMVKDLRT E V+DGDLD F+++ L Sbjct: 303 QIRNYVFHPYQMVKDLRTQHETNDVQGVMDGDLDPFIQSLL 343 >gi|54297691|ref|YP_124060.1| hypothetical protein lpp1742 [Legionella pneumophila str. Paris] gi|53751476|emb|CAH12894.1| hypothetical protein lpp1742 [Legionella pneumophila str. Paris] Length = 335 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 175/330 (53%), Positives = 230/330 (69%), Gaps = 1/330 (0%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 + + E ++W N +A+ L RER L+ + + ++ + D L ELA EEDD Sbjct: 2 EEVIRELESSNVWDNPEQAQALGRERTQLETIVHSLSQLSQSISDQRELFELAREEDDEQ 61 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 + + D L+ I+ +V +F + SG+ D ++AYL++ AG+GGTE+QDWA MLLRMY R Sbjct: 62 TIIDIGDELKSIEQQVASLEFRRMFSGKMDHSNAYLDIQAGSGGTEAQDWAEMLLRMYLR 121 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 W E F TE +E GE AGIKSAT+ G A+GWL+ E GVHRLVR SP+DS +RRH Sbjct: 122 WGEHHGFTTELIECSPGEVAGIKSATIHFTGEYAFGWLRTETGVHRLVRKSPFDSGNRRH 181 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TSF++++V P +DD IEIEI+ +D RIDTYRASGAGGQHVN TDSAVRITHIP+G+VVQC Sbjct: 182 TSFAAVFVSPEIDDDIEIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHIPSGIVVQC 241 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 Q +RSQHKNK QA LRAKLYELE+QK+ E++K++IGWG QIRSYVL + Sbjct: 242 QNDRSQHKNKDQAMKQLRAKLYELEMQKKNAEQQALEATKSDIGWGSQIRSYVLD-QSRI 300 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 KDLRT +E ++ VLDG LD F++A+L Sbjct: 301 KDLRTGVETSNTQAVLDGSLDQFIEASLKA 330 >gi|297620623|ref|YP_003708760.1| Peptide chain release factor 2 [Waddlia chondrophila WSU 86-1044] gi|297375924|gb|ADI37754.1| Peptide chain release factor 2 [Waddlia chondrophila WSU 86-1044] Length = 326 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 159/323 (49%), Positives = 212/323 (65%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E W + A+ ++ E L KE++ RL D L A E D +L + + Sbjct: 1 MEAAGFWDDPDAAQQVITEINSLKQWTIPCKELKRRLEDVKELQPEAEEAGDEGLLADLN 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L RI+ E+ + +LSGE D+ + YL ++AGAGGTE+ DW ML RMY RW +KRK Sbjct: 61 QELFRIENELGELEIRRMLSGELDNKNCYLSINAGAGGTEACDWVEMLSRMYQRWCDKRK 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K E +++ GE AG KS TL + G A+G+ K E+GVHRLVRISP+DS SRRHTSF+S+ Sbjct: 121 WKCEVVDMVPGEVAGTKSVTLKMTGNFAFGYSKAEKGVHRLVRISPFDSGSRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + D I+IEI+ D RIDT+RASGAGGQHVN TDSAVR+THIPTGVVV CQ +RSQ Sbjct: 181 DVTPEITDDIQIEINPDDIRIDTFRASGAGGQHVNVTDSAVRMTHIPTGVVVSCQSQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 ++NK + +L++KLYE+E+ +RE+ K +IGWG QIR+YV PY +VKD RT Sbjct: 241 NQNKEACFKILKSKLYEMEVMEREKKIKELGGEKMDIGWGSQIRNYVFHPYSLVKDTRTK 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 +E + V+DG LD F+ A L Sbjct: 301 VESANVQAVMDGSLDLFVNAYLK 323 >gi|268316864|ref|YP_003290583.1| LigA [Rhodothermus marinus DSM 4252] gi|262334398|gb|ACY48195.1| LigA [Rhodothermus marinus DSM 4252] Length = 371 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 153/356 (42%), Positives = 225/356 (63%), Gaps = 7/356 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +++ LG D ++++ LN + P W N A+ + ++ ++ ++ +++ Sbjct: 8 LLERVDTLGRFLDIPGRKEKIAKLNEERLAPGFWDNPERAREVEKQIAEEESWVAAWEQL 67 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + D LLEL EE D ++ +E + + R++ +++ + SLL+ D +A L +H Sbjct: 68 RRQADDVQTLLELQQEEPDANLEEEIAREVARLEQQLDELELRSLLTDPDDHRNAILTIH 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA MLLRMYTRW E+ + E LE G+ AGIKSATL I GP AYG+LK Sbjct: 128 PGAGGTESQDWAEMLLRMYTRWGERHGYDVELLEYQAGDVAGIKSATLRIAGPYAYGYLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVRISP+D++ RRHTSF+S++VYP +DDSIE++I + + T+R+ G GGQ+ Sbjct: 188 GESGVHRLVRISPFDASGRRHTSFASVFVYPEIDDSIEVDIRPDEIEMQTFRSGGKGGQN 247 Query: 243 VNTTDSAVRITHI-------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 VN ++ VR+ VV +C +ERSQ +N+ +A ML++++Y+LE + RE Sbjct: 248 VNKVETGVRLIWHGKLSNGEEARVVAECTEERSQLQNRQRALTMLKSRIYQLEREIREAE 307 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ES K +I WG QIRSYV QPY MV D RT + T V+DGDLD F++A L Sbjct: 308 KRKRESQKKKIEWGSQIRSYVFQPYTMVNDHRTETKVTDVQAVMDGDLDPFIRAYL 363 >gi|257867488|ref|ZP_05647141.1| peptide chain release factor 2 [Enterococcus casseliflavus EC30] gi|257873817|ref|ZP_05653470.1| peptide chain release factor 2 [Enterococcus casseliflavus EC10] gi|257801544|gb|EEV30474.1| peptide chain release factor 2 [Enterococcus casseliflavus EC30] gi|257807981|gb|EEV36803.1| peptide chain release factor 2 [Enterococcus casseliflavus EC10] Length = 329 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 161/325 (49%), Positives = 216/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + +A+ ++ ++ + L + ++LE+ EE D + E Sbjct: 1 MAHPTFWDDSEKAQQVINANNANKETYDQFNQLAEELEELEVMLEMIQEEADPEMEAELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + ++ ++ + LL D N+A +E+H GAGGTESQDW +MLLRMYTR+ E+ Sbjct: 61 ARITKLNEKMASYELSMLLDEPYDRNNAIIELHPGAGGTESQDWGSMLLRMYTRFCEQHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 ++ E L+ G+EAGIKS TLL+KG NAYG+LK E+GVHRLVRISP+DS RRHTSF S+ Sbjct: 121 YQVETLDYQAGDEAGIKSVTLLVKGHNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D +I++EI+ D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV Q +RSQ Sbjct: 181 DVMPELDGAIDVEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML+AKLY+LE++K+E+ A + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQLEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L +K Sbjct: 301 FETGNVQAVMDGDLDGFIDAYLKLK 325 >gi|242279065|ref|YP_002991194.1| hypothetical protein Desal_1593 [Desulfovibrio salexigens DSM 2638] gi|242121959|gb|ACS79655.1| hypothetical protein Desal_1593 [Desulfovibrio salexigens DSM 2638] Length = 372 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 162/343 (47%), Positives = 225/343 (65%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 + +N GG+FD + +RL + P W ++RE+ L+ ++ + Sbjct: 16 QNMNPSGGVFDHAQSKERLEEIEHDLSKPGAWDKPDALTPVLREKSMLEEKVTSYDNLTS 75 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 D L +A E+ D IL+ S+N++++ VE + +LLSG D + A LE+H G Sbjct: 76 SKDDVEEWLMMASEDQDQEILEALSENVEKLAKLVEQTELAALLSGPEDKSTAILEIHPG 135 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG ESQDWA MLLRMY RWA+KR +KT L+ +EAGIKS TL I+G AYG+LKGE Sbjct: 136 AGGIESQDWAEMLLRMYLRWADKRNWKTSYLDYQPDDEAGIKSVTLRIEGLYAYGFLKGE 195 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G+HRL+RISP+D++ RRHTSF+S+ VYP + IEIE+ + D R+D +RASG GGQHVN Sbjct: 196 AGIHRLIRISPFDASGRRHTSFASVDVYPEISQDIEIEVKDEDIRLDVFRASGPGGQHVN 255 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T+SAVRITH+PT +VVQCQ E+SQ KNK A +L+++LYE EL+++EE ++K Sbjct: 256 KTNSAVRITHLPTNIVVQCQNEKSQLKNKETAMKVLKSRLYEQELKRQEESKRADYATKD 315 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 IG+G QIR+Y LQPY++VKD R E + VLDG+LD + Sbjct: 316 SIGFGSQIRTYTLQPYRLVKDHRCGAEDGNVEAVLDGELDGLI 358 >gi|183219678|ref|YP_001837674.1| peptide chain release factor 2 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189909814|ref|YP_001961369.1| peptide chain release factor 2 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774490|gb|ABZ92791.1| Peptide chain release factor 2 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778100|gb|ABZ96398.1| Peptide chain release factor 2 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 375 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 174/352 (49%), Positives = 227/352 (64%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ ++ RL L K DP LW + +AK + ++R L + Sbjct: 14 EMIESFQTYWTAQNFQEDYDRLLSLIEKANDPKLWDSPDQAKNVTQKRNELQMKLDPWLG 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D L+EL EE S L+ +D+ R+ E Q LSG+ D A++ + Sbjct: 74 LKKELLDFPDLIELTSEEMGESGLKSLNDDFDRMFESFENLQMLDALSGKDDGKAAFINI 133 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA+MLLRMYTR+AE++ ++ E ++ GE AGIK+ATL I+G + +G+L Sbjct: 134 HPGAGGTESQDWADMLLRMYTRFAEQKGYRAELVDYQPGETAGIKNATLYIQGDHPFGYL 193 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+DSN RRHTSF+S++V P VDD I++ I E D R+D YR+SGAGGQ Sbjct: 194 KCESGVHRLVRISPFDSNKRRHTSFASVYVTPEVDDDIQVNIEEKDLRVDVYRSSGAGGQ 253 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTGVVV CQ ERSQ KN+ A ML+A+LYE+E QK EE Sbjct: 254 HVNTTDSAVRITHIPTGVVVSCQMERSQIKNRDTAMKMLKARLYEMEKQKAEEENAKKAG 313 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K +I WG QIRSYV PY +VKD RT+ E + V+DGDL+DF+ A L Sbjct: 314 EKRDIAWGSQIRSYVFHPYNLVKDHRTDFETGNVHAVMDGDLEDFIIAYLKY 365 >gi|62184808|ref|YP_219593.1| peptide chain release factor 2 [Chlamydophila abortus S26/3] gi|81313013|sp|Q5L6U9|RF2_CHLAB RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|62147875|emb|CAH63621.1| putative peptide chain release factor 2 [Chlamydophila abortus S26/3] Length = 368 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 162/358 (45%), Positives = 222/358 (62%), Gaps = 8/358 (2%) Query: 3 LSRQLNCL-------GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA 55 L ++L L G D + Q LS L +T WQ+V A + L Sbjct: 5 LDKRLEGLLTGLALAGRSLDLEGKRQELSILEEQTLKEDFWQDVTSAGKVSERIVSLKRQ 64 Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 I+ +E + R+ + L D + ++ + + + + LLSGE D N Sbjct: 65 IAHYEEFKVRVENLAFFLNDGDVSADPELREDLEKEFTICEHILSEWETQRLLSGEVDKN 124 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 +L ++AGAGGTES DW ML RMY RWA + ++K E ++ +G+ AGIK T+ G Sbjct: 125 PCFLTINAGAGGTESCDWVEMLFRMYCRWAAQHQWKVEVIDRQEGDVAGIKHVTVKFSGD 184 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 AYG+ K E+GVHRLVRISP+DSN++RHTSF+S+ VYP +DD IEI+I +D RIDT+R+ Sbjct: 185 YAYGYAKAERGVHRLVRISPFDSNAKRHTSFASVDVYPEIDDEIEIDIRPNDLRIDTFRS 244 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVN TDSAVRITHIPTG++V CQ+ERSQ +N+ MLRA++Y+ LQ+R E Sbjct: 245 SGAGGQHVNVTDSAVRITHIPTGIMVSCQRERSQIQNRESCMKMLRARMYQQILQERLEK 304 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 + +K EI WG QIR+YV QPY +VKD+RT E + ++DG+ LDDF+KA LA Sbjct: 305 QLLDRKNKKEIAWGSQIRNYVFQPYTLVKDVRTGHETGNVQAMMDGELLDDFVKAYLA 362 >gi|295395219|ref|ZP_06805427.1| peptide chain release factor RF2 [Brevibacterium mcbrellneri ATCC 49030] gi|294971981|gb|EFG47848.1| peptide chain release factor RF2 [Brevibacterium mcbrellneri ATCC 49030] Length = 376 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 145/352 (41%), Positives = 214/352 (60%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + D + ++ L P LW + A+ + + H + +++ Sbjct: 12 LQQTFSSIREVSDVEQLKSEVAELTEAAAAPDLWDDPDVAQAITSKLSHKQGTLEKLQKF 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 R+ D +L+ + +E D L E + ++++K E+ + +LLSGE D A + V Sbjct: 72 DQRIEDVELLVSMGEDEGDEDALNEAAAEVEKLKSELAALEISTLLSGEFDERSAVITVR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ DWA ML RMY RWAE R +K E L+ E AG+KSAT+ + P AYG L Sbjct: 132 AGAGGDDATDWAQMLTRMYIRWAENRGYKVEELDTSYAEGAGVKSATVQVNAPYAYGTLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ + I+I E+D RID +R+SG GGQ Sbjct: 192 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIEQTDHIDIDENDLRIDVFRSSGPGGQS 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTGVVV Q E+SQ +N+A A +L+++L +L+ ++ E Sbjct: 252 VNTTDSAVRITHVPTGVVVSMQNEKSQIQNRAAAMRVLQSRLLQLKREEEEAQKKDLAGD 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYV PYQMVKDLRT E +P V DGD+DDF++A + + Sbjct: 312 -IKASWGDQMRSYVTHPYQMVKDLRTGYEVNNPQAVFDGDIDDFLEAGIRWR 362 >gi|320531255|ref|ZP_08032234.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 171 str. F0337] gi|320136522|gb|EFW28491.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 171 str. F0337] Length = 373 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 146/357 (40%), Positives = 212/357 (59%), Gaps = 4/357 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + D + R++ L+ + P LW + A+++ H + ++ Sbjct: 11 RLRHTYASIAAVTDPEALRARIAELSEQASAPDLWDDPDSAQVVTSALSHAQADLKRVES 70 Query: 62 IQDRLCDNL---ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 + +R+ D L ED IL E +L I ++ + +LLSGE D DA Sbjct: 71 LGERIEDLEAMVELAGEEEGEDAAEILAEAEADLSAISKDLSELEIRTLLSGEYDPRDAV 130 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + + +GAGG ++ D+A MLLRMYTRWAE+ ++ + L EEAG+KS T I P AY Sbjct: 131 ITIRSGAGGVDAADFAEMLLRMYTRWAERHEYPVKVLNTSYAEEAGLKSVTFEIHAPYAY 190 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G L E G HRLVRISP+D+ RR TSF+++ V P+++ + I+I E+D RID +R+SG Sbjct: 191 GTLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHIDIPETDIRIDVFRSSGP 250 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +N+A A +L+++L L+ Q+ + Sbjct: 251 GGQSVNTTDSAVRITHLPTGLVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQQEEDAKKKE 310 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQMVKDLRTN E +P V DGD+D F+ A + +K Sbjct: 311 LAGD-VKASWGDQMRSYVLNPYQMVKDLRTNFEVGNPDSVFDGDIDGFIDAGIRWRK 366 >gi|15605186|ref|NP_219972.1| peptide chain release factor 2 [Chlamydia trachomatis D/UW-3/CX] gi|76789195|ref|YP_328281.1| peptide chain release factor 2 [Chlamydia trachomatis A/HAR-13] gi|7388051|sp|O84465|RF2_CHLTR RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|123606855|sp|Q3KLN9|RF2_CHLTA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|3328893|gb|AAC68059.1| Peptide Chain Release Factor 2 [Chlamydia trachomatis D/UW-3/CX] gi|76167725|gb|AAX50733.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis A/HAR-13] Length = 369 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 161/342 (47%), Positives = 212/342 (61%), Gaps = 1/342 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 LFD + L L + W +V+ A + L +S E+++++ Sbjct: 21 RSLFDPEGKENELKELEQQAVQDGFWDDVVRAGKISERIARLKQQLSEFNELKNKVSAIQ 80 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LE D + +E + ++ + LLSGE D N +L ++AGAGGTES Sbjct: 81 FFLEDEESSKDLEMQKELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTES 140 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DW MLLRMY RWA ++ E ++ DGE AGIK TL + G AYG+ K E GVHRL Sbjct: 141 CDWVEMLLRMYMRWASSHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRL 200 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+DSN++RHTSF+S+ V+P +DD IE+EI D RIDTYR+SGAGGQHVN TDSAV Sbjct: 201 VRISPFDSNAKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAV 260 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PTG+VV CQ ERSQ +N+ NMLRA++Y+ LQ+R E NI +K EI WG Sbjct: 261 RITHFPTGIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGS 320 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351 QIR+YV QPY +VKD+RT E + ++DG+ LD F+KA L Sbjct: 321 QIRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYL 362 >gi|191637822|ref|YP_001986988.1| Peptide chain release factor 2 (RF-2) [Lactobacillus casei BL23] gi|190712124|emb|CAQ66130.1| Peptide chain release factor 2 (RF-2) [Lactobacillus casei BL23] Length = 332 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 147/325 (45%), Positives = 210/325 (64%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + A+ ++ L +++ L D EL +E D + QE Sbjct: 1 MAEPGFWDDSEAAQKVIDNNNALKEKHDRFYALENELEDLEAGFELLQDEPDKDLQQEEE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ ++ +++ + + LL+G D N+A LE+H GAGGTESQDW +ML+RMY RWA++ Sbjct: 61 AKIKDLQEKLDKYEMQLLLNGPYDHNNAILEIHPGAGGTESQDWGSMLMRMYQRWADQNG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E + G+EAGIKS TLLI G NAYG LK E+GVHRLVRISP+DS RRHTSF+S+ Sbjct: 121 FKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEKGVHRLVRISPFDSAGRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D+SIE+++ D +++ +R+SGAGGQH+N T SAVR+ H+PTG+V Q +RSQ Sbjct: 181 DVMPELDNSIEVDLRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHLPTGIVTSSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NKA A ML+AKLY+ E + + A + + ++ +G QIRSYV PY MVKD RTN Sbjct: 241 FQNKATAMAMLKAKLYQREEEAKRAKAKAIQGEQKDVAFGSQIRSYVFHPYTMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + + V+DGDL+ F+ A L + Sbjct: 301 YETGNGNAVMDGDLNPFINAYLQWE 325 >gi|239981919|ref|ZP_04704443.1| peptide chain release factor 2 [Streptomyces albus J1074] Length = 355 Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats. Identities = 154/349 (44%), Positives = 214/349 (61%), Gaps = 1/349 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + + + D D ++ L + P LW + A+ + + HL + + ++ RL Sbjct: 1 MESIEAVLDLDRLRAEIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTEALRSRL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D +L ELA EDD E L ++ ++ + +LLSGE D+ +A + + A AG Sbjct: 61 DDLGVLFELAEAEDDADTRAEAESELASVRKALDEMEVRTLLSGEYDAREALVNIRAEAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G ++ D+A L RMY RWAE+R +KTE E EEAGIKS T ++ P AYG L EQG Sbjct: 121 GVDAADFAEKLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAVQAPYAYGTLSVEQG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HRLVRISP+D+ RR TSF+ + V PVV+ + IEI ES+ R+D YR+SG GGQ VNTT Sbjct: 181 THRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E Q+ + + + Sbjct: 241 DSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMDALKGDGGN- 299 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRT E +P V +G++D F++A + +K Sbjct: 300 SWGNQMRSYVLHPYQMVKDLRTEEEMGNPEAVFNGEIDGFLEAGIRWRK 348 >gi|227356361|ref|ZP_03840749.1| peptide chain release factor 2 [Proteus mirabilis ATCC 29906] gi|227163471|gb|EEI48392.1| peptide chain release factor 2 [Proteus mirabilis ATCC 29906] Length = 320 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 176/318 (55%), Positives = 227/318 (71%), Gaps = 1/318 (0%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W +A+ L +ER L+ + I +++ L D LL+LA+E DD E L+ + Sbjct: 2 WNEPEKAQALGKERSSLEAIVETIDQLEQGLEDVSGLLDLAVEADDEETFNEAVAELEGL 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 ++E +F + SGE DS D YL++ AG+GGTE+QDWA+ML+RMY RWAE R FKTE + Sbjct: 62 NKKLEQLEFRRMFSGEYDSADCYLDLQAGSGGTEAQDWASMLMRMYLRWAESRGFKTEII 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E DG+ AG+KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSFSS +VYP V Sbjct: 122 EESDGDVAGLKSATIKIIGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEV 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DD+I+IEI+ +D RID YRASGAGGQHVN T+SAVRITH+PTG+V QCQ +RSQHKNK Q Sbjct: 182 DDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHVPTGLVTQCQNDRSQHKNKDQ 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A ++AKLYELE+QK+ + E +K++IGWG QIRSYVL +KDLRT +E + Sbjct: 242 AMKQMKAKLYELEMQKKNADKQVMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNT 300 Query: 336 SDVLDGDLDDFMKATLAI 353 VLDGDLD F++A+L Sbjct: 301 QAVLDGDLDKFIEASLKA 318 >gi|260771153|ref|ZP_05880080.1| peptide chain release factor 2 [Vibrio furnissii CIP 102972] gi|260613750|gb|EEX38942.1| peptide chain release factor 2 [Vibrio furnissii CIP 102972] gi|315179241|gb|ADT86155.1| peptide chain release factor 2 [Vibrio furnissii NCTC 11218] Length = 320 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 169/317 (53%), Positives = 224/317 (70%), Gaps = 1/317 (0%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W A+ L +ER L+ + I ++ + D LLELA+E +D E L+ + Sbjct: 2 WNEPERAQALGKERSSLEAVVETIDQLDQGVDDVEGLLELAVEAEDQETFDEIGPELEEL 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + ++ +F + SG+ DS+D YL++ AG+GGTE+QDW +M+LRMY RWA+ + FKTE + Sbjct: 62 ESKLAKLEFRRMFSGDHDSSDCYLDLQAGSGGTEAQDWTSMMLRMYLRWADAKGFKTEVI 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E+ +G+ AG+KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSF+S +VYP + Sbjct: 122 EVSEGDVAGLKSATVRIVGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFVYPEI 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DD+I I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK Q Sbjct: 182 DDNIAIDINPADLRIDVYRASGAGGQHVNTTESAVRITHLPTNTVVQCQNDRSQHKNKDQ 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A LRAKL+ELELQK+ E +K++IGWG QIRSYVL +KDLRT +E + Sbjct: 242 AMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNT 300 Query: 336 SDVLDGDLDDFMKATLA 352 VLDGDLD F++A+L Sbjct: 301 QAVLDGDLDKFIEASLK 317 >gi|313675052|ref|YP_004053048.1| bacterial peptide chain release factor 2 (brf-2) [Marivirga tractuosa DSM 4126] gi|312941750|gb|ADR20940.1| bacterial peptide chain release factor 2 (bRF-2) [Marivirga tractuosa DSM 4126] Length = 363 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 146/350 (41%), Positives = 212/350 (60%), Gaps = 2/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ L G D++ V+ + L + P W + EA+ M+ Q L E+ Sbjct: 9 LKARVEALRGYLDYNKKVEEIKELELVSAQPDFWNDSDEAEKTMKVIQGLKEWTKHFDEL 68 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + E + + K E + + +LS E D A L++ Sbjct: 69 SELYGEVETYYEFLEMGESSEEEVSKAYKKALTK--TEELELKKMLSSEEDQLSAMLQIT 126 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA +L+RMY W E +K ++ +G+ AG+KS TL GP AYG+LK Sbjct: 127 PGAGGTESNDWAGILMRMYIMWGEANGYKVREVDFQEGDVAGVKSVTLEFDGPQAYGFLK 186 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DS RRHTSF+S++VYPVVDDSIEI+I +D + T R+ GAGGQ+ Sbjct: 187 SENGVHRLVRISPFDSGGRRHTSFASVYVYPVVDDSIEIDIHPNDVELHTSRSGGAGGQN 246 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++ V++TH PTG+VV CQ R+Q N+ +A ML+++LY++E++KR N E+ Sbjct: 247 VNKVETKVQLTHKPTGIVVVCQANRTQLGNREEAMKMLKSQLYQIEVEKRSAERNEVEAG 306 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K +I +G QIR+YVL PY+++KD RT +E+T +VLDGDL+D++KA L Sbjct: 307 KKKIDFGSQIRNYVLHPYKLIKDARTGVERTDVQNVLDGDLNDYIKAYLM 356 >gi|160944128|ref|ZP_02091358.1| hypothetical protein FAEPRAM212_01630 [Faecalibacterium prausnitzii M21/2] gi|158444804|gb|EDP21808.1| hypothetical protein FAEPRAM212_01630 [Faecalibacterium prausnitzii M21/2] gi|295105045|emb|CBL02589.1| bacterial peptide chain release factor 2 (bRF-2) [Faecalibacterium prausnitzii SL3/3] Length = 373 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 147/350 (42%), Positives = 218/350 (62%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 ++ + L + + +R+ L P + + +K + E L ++ +++Q Sbjct: 15 AKAVKDLEEALAIEASRKRVQELEHTMSRPGFYDDAELSKKVFDEVGDLKGKLNRFEKLQ 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 D +LE+ EE D +++ E + + + VE Q ++L+GE D ++A L HA Sbjct: 75 GLYDDAETMLEMLDEEYDPAMIPEAEEAVNTVGKAVEELQLMTMLNGEYDHSNAILTFHA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G GGTE+QDWA ML RMY +WA+ E L+ DG+EAG+KSA++++KG NAYG LK Sbjct: 135 GTGGTEAQDWAEMLYRMYNKWAQAHGMTVEVLDYQDGDEAGLKSASMMVKGANAYGLLKS 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR+SP+D+N+RR TSF+S+ V P +D++I++ I D + YR+SGAGGQH+ Sbjct: 195 ENGVHRLVRVSPFDANARRQTSFASLEVMPELDNTIQVNIRPEDIEMQVYRSSGAGGQHI 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SAVR+ H PTG+VV CQ +RSQ +N+ A ML+AKLY++ Q+ + + + + Sbjct: 255 NKTSSAVRLIHKPTGIVVNCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKGVQ 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 EI WG QIRSYV PY MVKD RTN E + V+DGD+D+F+ A L Sbjct: 315 NEIAWGHQIRSYVFMPYTMVKDHRTNYETGNVDAVMDGDIDEFIFAYLKA 364 >gi|134095412|ref|YP_001100487.1| peptide chain release factor 2 [Herminiimonas arsenicoxydans] gi|133739315|emb|CAL62364.1| Peptide chain release factor 2 (RF-2) [Herminiimonas arsenicoxydans] Length = 325 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 173/324 (53%), Positives = 231/324 (71%), Gaps = 1/324 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 EDP +W + A+ L +E++ L+ + + ++ L D L E+A EE+D + Sbjct: 1 MEDPKVWDDPKRAQDLGKEKKSLEAIVHTLIKVDAELKDAHDLFEMAREENDEDTIVAIE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + Q + VE +F + SG D+N+ ++++ AGAGGTE+QDWA+MLLR Y R+ E++ Sbjct: 61 ADTQELLKTVEGMEFRRMFSGPMDANNCFIDIQAGAGGTEAQDWASMLLRQYLRYCERKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E LE DGE AGIK+ATL ++G AYG L+ E GVHRLVR SP+DS + RHTSFSS+ Sbjct: 121 FKVEILEQSDGEVAGIKTATLKVEGEYAYGLLRTETGVHRLVRKSPFDSANGRHTSFSSL 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 +VYP VDDSIEI+I+ +D RIDTYRASGAGGQH+N TDSAVR+TH P+G+VVQCQ +RSQ Sbjct: 181 FVYPEVDDSIEIDINPADVRIDTYRASGAGGQHINKTDSAVRLTHGPSGIVVQCQNDRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H+NKA+AW+ML+AKL+ELE++ R E SKT++GWG QIRSYVL +KDLRTN Sbjct: 241 HRNKAEAWDMLKAKLFELEMRNRMSEQQKLEDSKTDVGWGHQIRSYVLD-QSRIKDLRTN 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + VLDGDLDDF+ A+L Sbjct: 300 FETGNTKAVLDGDLDDFIAASLKQ 323 >gi|319954923|ref|YP_004166190.1| bacterial peptide chain release factor 2 (brf-2) [Cellulophaga algicola DSM 14237] gi|319423583|gb|ADV50692.1| bacterial peptide chain release factor 2 (bRF-2) [Cellulophaga algicola DSM 14237] Length = 366 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 154/351 (43%), Positives = 221/351 (62%), Gaps = 2/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L L D D + + KT P W N +A+ M+ Q + K Sbjct: 11 LLDRLGALRRYLDVDAKLIEIENEQEKTLAPDFWDNPQKAQEHMKYIQSKKKWVDDYKTS 70 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D +L+E + +E + +E +F+++LS E D A +++ Sbjct: 71 ETLANDLEVLIEFQK--EGAITEEEVEKQYTKTLDTIENLEFKNMLSEEGDELPAIIQIT 128 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA ML+RMY W+EK+ FK + L +G+ GIK+ TL I G ++GWLK Sbjct: 129 AGAGGTESCDWAAMLMRMYMMWSEKKGFKIKELNYQEGDVTGIKTVTLEIDGEFSFGWLK 188 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDSIEI I+ +D I T R+SGAGGQ+ Sbjct: 189 GENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIAINPADIDITTARSSGAGGQN 248 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++ V++TH P+G+ + C RSQH+N+A A ML+++LYE+EL+K+ E ESS Sbjct: 249 VNKVETKVQLTHKPSGIQISCSDSRSQHENRATALKMLKSQLYEIELRKKMEARQEIESS 308 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K +I WG QIR+YV+ PY++VKD+RT E + V+DGD+D F+KA L + Sbjct: 309 KMKIEWGSQIRNYVMHPYKLVKDVRTATETGNVDAVMDGDIDKFLKAFLMM 359 >gi|300114892|ref|YP_003761467.1| peptide chain release factor 2 [Nitrosococcus watsonii C-113] gi|299540829|gb|ADJ29146.1| peptide chain release factor 2 [Nitrosococcus watsonii C-113] Length = 331 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 172/328 (52%), Positives = 229/328 (69%), Gaps = 1/328 (0%) Query: 25 FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84 ++ + P +W A+ L +ER L + +S + E+ + + L ELA+EEDD Sbjct: 2 EVDRELAVPSVWDEPERAQQLGQERAQLQSVVSPLAELGEEIMQAKELFELAVEEDDEGT 61 Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 QE L ++ + +F+ + +GE D N+AYL++ AG+GGTE+QDWA+MLLRMY RW Sbjct: 62 AQEMIAELDAVEQRLAKLEFQRMFAGEMDPNNAYLDIQAGSGGTEAQDWASMLLRMYLRW 121 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 EK FKT E+ +GE AGIKSAT+ +G A+GWL+ E GVHRLVR SP+DS +RRHT Sbjct: 122 GEKHDFKTGLTEVSEGEVAGIKSATIHFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHT 181 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 SF+S++VYP VD+ I+IEI+ +D RIDTYRASGAGGQHVN TDSAVRITH+ + +VVQCQ Sbjct: 182 SFASVFVYPEVDERIDIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHLSSNLVVQCQ 241 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 ERSQH+NKA A LRAKLYELE++ R+ E +K +IGWG QIR+YVL +K Sbjct: 242 SERSQHQNKAHAMAQLRAKLYELEMRSRQAEKQAAEEAKADIGWGSQIRNYVLD-QSRIK 300 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLA 352 DLRT +E + VLDGDLD F++A+L Sbjct: 301 DLRTGVEIGNTQGVLDGDLDPFIEASLK 328 >gi|225549713|ref|ZP_03770678.1| peptide chain release factor 2 [Borrelia burgdorferi 118a] gi|225369673|gb|EEG99121.1| peptide chain release factor 2 [Borrelia burgdorferi 118a] Length = 348 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 150/347 (43%), Positives = 216/347 (62%), Gaps = 4/347 (1%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG FD + ++ + + W + A+ +++ + L N I +E+ +++ Sbjct: 3 KTFGGSFDKNEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIK 62 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L ++ ++ + + S E D+N+A+L +H+GAGG Sbjct: 63 DLSDL---CEIAENEKDTNGLEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGG 119 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DW ML RMY+R+AE++K+KTE +++ + E GIKS T+ IKG AYG LK E G+ Sbjct: 120 TEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGI 178 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRL+RISP+D+ +RHTSF+S++V PV+DD IEI I D RIDTYRASGAGGQHVN T Sbjct: 179 HRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEITIKPEDIRIDTYRASGAGGQHVNKTS 238 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHI TG+V Q Q +RSQHKNK A +L+++LYE K +E + +K EI Sbjct: 239 SAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEIS 298 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYV QPY +VKD RT E ++ + V+DG++D+F++ L K Sbjct: 299 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 345 >gi|37520802|ref|NP_924179.1| peptide chain release factor 2 [Gloeobacter violaceus PCC 7421] gi|35211797|dbj|BAC89174.1| peptide chain release factor [Gloeobacter violaceus PCC 7421] Length = 354 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 146/342 (42%), Positives = 218/342 (63%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD R++ L + P W + A+ ++ +L + ++ L D Sbjct: 8 RTIFDVAQRQIRIAALEQQASAPDFWDDQAAAQKALQNLNNLKQPLEQFGRWRNLLSDAE 67 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 ++LEL E D S+L E N++ + E++ + E LLSG D A L ++AGAGGT++ Sbjct: 68 VVLELVQETGDESLLPEAEGNIEALVGELDRWELEQLLSGPYDERGAILSINAGAGGTDA 127 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRWAE++ ++ LE+ +GEEAG+KSATL I G AYG+L E+G HRL Sbjct: 128 QDWAEMLLRMYTRWAERQGYQAHLLELSEGEEAGVKSATLEIDGRYAYGYLSAEKGTHRL 187 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+++N +R TSF+ + V PV+DDS++++I D IDT+R+ G GGQ+VN ++ V Sbjct: 188 VRISPFNANDKRQTSFAGVEVMPVLDDSVQVDIRPDDIEIDTFRSGGKGGQNVNKVETGV 247 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+TH PTG+ V+C QER+Q +N+ +A ML+A+L LE +KR++ + + WG Sbjct: 248 RVTHKPTGISVRCTQERAQLQNRNKAMEMLKARLLVLEEEKRQQHLSDIRGEAVDAAWGN 307 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYV PYQMVKDLRT E + + V++G ++ F++ L Sbjct: 308 QIRSYVFHPYQMVKDLRTEEETSDVTGVMNGKIEPFIERYLR 349 >gi|224373403|ref|YP_002607775.1| peptide chain release factor 2 [Nautilia profundicola AmH] gi|254790918|sp|B9L5Y7|RF2_NAUPA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|223589806|gb|ACM93542.1| peptide chain release factor 2 [Nautilia profundicola AmH] Length = 367 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 168/354 (47%), Positives = 229/354 (64%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++ + + + RL + P W + + + +E+ + + K+ Sbjct: 12 ELENKIENIESILKPEKLEARLKEIEELENSPDFWNDPKTSAKVQKEKNAILRKLEKYKK 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L DN + ELA E+D L E +++Q +K + + E +LS E D+ +A + + Sbjct: 72 AKTALQDNKDMFELASMEEDEETLNEVFNDVQDLKKIIRDLEIEVMLSDENDAKNAIISI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTES DWA++L RMY R+AE+R +K E L+ G+EAGIK + L+KG NAYG+L Sbjct: 132 HPGAGGTESHDWASILYRMYLRYAERRGWKVEVLDYQAGDEAGIKDVSFLVKGENAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HRLVR+SP+DS RRHTSF+S+ V P +DD IEIEI D RID +RASGAGGQ Sbjct: 192 KAENGIHRLVRVSPFDSGGRRHTSFASVQVSPEIDDDIEIEIDPKDIRIDVFRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPTG+VV CQ +RSQHKNK A ML++KLYELEL+KR+ Sbjct: 252 HVNKTESAVRITHIPTGIVVGCQTDRSQHKNKDMAMKMLKSKLYELELEKRKAEEEG--K 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K E+GWG QIRSYVL PYQ VKD R+N + D+LDGDLD+ ++ L +K Sbjct: 310 PKDEMGWGHQIRSYVLFPYQQVKDNRSNKAYSRVDDILDGDLDEVIEDVLIAEK 363 >gi|322516704|ref|ZP_08069613.1| peptide chain release factor RF2 [Streptococcus vestibularis ATCC 49124] gi|322124737|gb|EFX96175.1| peptide chain release factor RF2 [Streptococcus vestibularis ATCC 49124] Length = 337 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 150/336 (44%), Positives = 214/336 (63%), Gaps = 2/336 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L + +P W + I A+ ++ L +Q+ + L L + Sbjct: 1 MEEDIALLENRMTEPDFWNDNIAAQKTSQDLNELKMKYETFNNMQELSDETE--LYLEML 58 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E+D SI +E + L+++ + + LLS D ++A LE+H G+GGTE+QDWA+MLL Sbjct: 59 EEDDSIQEELEETLEKLDKIMTSYEMTLLLSEPYDHSNAILEIHPGSGGTEAQDWADMLL 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY R+ + FK E L+ G+EAGIKS TL +GPNAYG+LK E GVHRLVRISP+DS Sbjct: 119 RMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSF+S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG Sbjct: 179 AKRRHTSFTSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VV +R+Q+ N+ +A ML+AKLY++E +K+ E N + K EI WG QIRSYV Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFT 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RT E V+DGD++ F+ A L + Sbjct: 299 PYTMVKDHRTGYEVAQVDKVMDGDIEGFIDAYLKWR 334 >gi|302865524|ref|YP_003834161.1| peptide chain release factor 2 [Micromonospora aurantiaca ATCC 27029] gi|315502072|ref|YP_004080959.1| peptide chain release factor 2 [Micromonospora sp. L5] gi|302568383|gb|ADL44585.1| peptide chain release factor 2 [Micromonospora aurantiaca ATCC 27029] gi|315408691|gb|ADU06808.1| peptide chain release factor 2 [Micromonospora sp. L5] Length = 373 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 159/353 (45%), Positives = 224/353 (63%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D ++ + L + P LW + +A+ + + +++ I+ + ++ Sbjct: 13 LDATLRNIEAVLDLDKLREQKARLEQEASAPDLWDDQAKAQQVTSQLSYVNGEITKLGDL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +LLELA EDD L E + + ++ + +LLSGE DS +A + + Sbjct: 73 RSRLDDAGVLLELAQAEDDPGALTEVESEITGLTKAIQEMEVRTLLSGEYDSREALVAIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A MLLRMY RWAE+ + TE E EEAG+KSAT +K P AYG L Sbjct: 133 AGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFTVKVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+ + V PV + + I+I E++ R+D YR+SG GGQ Sbjct: 193 VESGTHRLVRISPFDNQGRRQTSFAGVEVLPVTEQTDHIDIPENEVRVDVYRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+A+L E + Q+ EE ++ Sbjct: 253 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASAMRVLQARLLERKRQEEEEKLAGLKTG 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQMVKDLRT E +PS V DGDLD F++A + +K Sbjct: 313 -STSSWGDQMRSYVLHPYQMVKDLRTEQETGNPSSVFDGDLDSFIEAGIRWRK 364 >gi|159036572|ref|YP_001535825.1| peptide chain release factor 2 [Salinispora arenicola CNS-205] gi|189040003|sp|A8M3R1|RF2_SALAI RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|157915407|gb|ABV96834.1| peptide chain release factor 2 [Salinispora arenicola CNS-205] Length = 373 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 162/355 (45%), Positives = 222/355 (62%), Gaps = 5/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D + L P LW + A+ + + +++ I+ + ++ Sbjct: 13 LDTTLRNIESVLDIDRLRADKARLEEAASAPDLWDDQARAQQVTSQLSYVNGEITKLTDL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +LLELA E D +L E + + + ++ + +LLSGE DS +A + + Sbjct: 73 RSRLDDTQVLLELAEAESDPGVLTEVAAEITGLAKSIDEMEVRTLLSGEYDSREALVAIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A MLLRMY RWAE+ + TE E EEAG+KSAT +K P AYG L Sbjct: 133 AGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFTVKVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+ + V PVV+ + I+I E++ R D YR+SG GGQ Sbjct: 193 VESGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIDIPENEMRTDVYRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV CQ E+SQ +NKA A +L+A+L E +KR+E + Sbjct: 253 VNTTDSAVRITHIPTGIVVTCQNEKSQLQNKASALRVLQARLLE---RKRQEEQAKLQGL 309 Query: 303 KTEI--GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 KT+ WG Q+RSYVL PYQMVKDLRT E SPS V DG+LD F++A + +K Sbjct: 310 KTDAAGSWGDQMRSYVLHPYQMVKDLRTEQETGSPSSVFDGELDAFIEAGIRWRK 364 >gi|325571387|ref|ZP_08146887.1| peptide chain release factor RF2 [Enterococcus casseliflavus ATCC 12755] gi|325155863|gb|EGC68059.1| peptide chain release factor RF2 [Enterococcus casseliflavus ATCC 12755] Length = 329 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 160/325 (49%), Positives = 215/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ ++ ++ + L + ++LE+ EE D + E Sbjct: 1 MADPTFWDDSEKAQQVINANNANKETYDQFNQLAEELEELEVMLEMIQEEADPEMEAELD 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + ++ ++ + LL D N+A +E+H GAGGTESQDW +MLLRMYTR+ E+ Sbjct: 61 ARIGKLNEKMASYELSMLLDEPYDRNNAIIELHPGAGGTESQDWGSMLLRMYTRFCEQHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 ++ E L+ G+EAGIKS TLL+KG NAYG+LK E+GVHR VRISP+DS RRHTSF S+ Sbjct: 121 YQVETLDYQAGDEAGIKSVTLLVKGHNAYGYLKSEKGVHRFVRISPFDSAKRRHTSFCSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D +I++EI+ D +IDTYRASGAGGQH+N T+SAVRITHIP G VV Q +RSQ Sbjct: 181 DVMPELDGAIDVEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPKGTVVASQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KN+ QA ML+AKLY+LE++K+E+ A + EIGWG QIRSYV PY MVKD RTN Sbjct: 241 LKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQLEIGWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L +K Sbjct: 301 FETGNVQAVMDGDLDGFIDAYLKLK 325 >gi|260771797|ref|ZP_05880715.1| peptide chain release factor 2 [Vibrio metschnikovii CIP 69.14] gi|260613089|gb|EEX38290.1| peptide chain release factor 2 [Vibrio metschnikovii CIP 69.14] Length = 320 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 165/317 (52%), Positives = 221/317 (69%), Gaps = 1/317 (0%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W A+ L +ER L + I +++ + D LLELA+E D E L+ + Sbjct: 2 WNEPERAQALGKERSSLQAVVETINQLEQGVDDVEGLLELAIEAQDQETFDEVLPELEEL 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + ++ +F + SG+ D+ Y+++ AG+GGTE+QDW +MLLRMY RWA+ + FKTE + Sbjct: 62 EAKLAQLEFRRMFSGDHDAAHCYIDLQAGSGGTEAQDWTSMLLRMYLRWADDKGFKTEVI 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E+ +G+ AG+KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSF+S +VYP + Sbjct: 122 EVSEGDVAGLKSATVRIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFVYPEI 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 D++I ++I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK Q Sbjct: 182 DENIAVDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQ 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A LRAKL+ELELQK+ E +K++IGWG QIRSYVL +KDLRT +E + Sbjct: 242 AMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNT 300 Query: 336 SDVLDGDLDDFMKATLA 352 VLDGDLD F++A+L Sbjct: 301 QAVLDGDLDKFIEASLK 317 >gi|218439666|ref|YP_002377995.1| peptide chain release factor 2 [Cyanothece sp. PCC 7424] gi|218172394|gb|ACK71127.1| peptide chain release factor 2 [Cyanothece sp. PCC 7424] Length = 360 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 152/344 (44%), Positives = 220/344 (63%), Gaps = 1/344 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD ++ L + P W + A+ ++E L +++ ++ Q +L D Sbjct: 12 RTIFDLPALKAKIKDLEQRAAQPEFWDSPETAQSTLQELNELKSSLELYQQWQTQLEDAK 71 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + EL E+D S+LQE NLQ++ E+E + + LLSG D+ L ++AGAGGT++ Sbjct: 72 AISELLELEEDTSLLQEAQTNLQQLNHELERWELQQLLSGPYDAKGVLLTINAGAGGTDA 131 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRW EKR +K +E +G+EAGIKSATL I+G AYG+LKGE+G HRL Sbjct: 132 QDWAAMLLRMYTRWGEKRGYKVHLVESSEGDEAGIKSATLEIEGRYAYGYLKGEKGTHRL 191 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSI-EIEISESDCRIDTYRASGAGGQHVNTTDSA 249 VRISP+++N +R TSF+ + + P +++ +EI E D I T RA G GGQ+VN ++A Sbjct: 192 VRISPFNANGKRQTSFAGVEIMPNIEEEALNVEIPEKDLEITTSRAGGKGGQNVNKVETA 251 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+ H+PTG+ V+C +ERSQ +NK +A +L+AKL + +++R + E WG Sbjct: 252 VRVVHLPTGIAVRCTEERSQLQNKEKALALLKAKLLVIAVEQRAQEIAEIRGDMVEAAWG 311 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIR+YV PYQMVKDLRTN+E + V+DGDLD F++A L Sbjct: 312 NQIRNYVFHPYQMVKDLRTNVETSDIGAVMDGDLDAFIEAYLRQ 355 >gi|56416847|ref|YP_153921.1| peptide chain release factor 2 [Anaplasma marginale str. St. Maries] gi|56388079|gb|AAV86666.1| peptide chain release factor 2 [Anaplasma marginale str. St. Maries] Length = 338 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 171/332 (51%), Positives = 226/332 (68%), Gaps = 2/332 (0%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 L+++ LW + AK L+ ER ++ ++ + ++ + + LL+LA E D Sbjct: 2 EELDSRCSSASLWDDQENAKKLLSERARVEEVLASFRALEKEYAECVELLDLADESDSEF 61 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 + L +++ V K+ E + SGEAD + +L + GAGGTES DWA MLLRMY R Sbjct: 62 LDG-LWSALTQLERRVSQKKAECMFSGEADGSGCFLVIRPGAGGTESNDWAAMLLRMYVR 120 Query: 144 WA-EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 WA F TE ++ DGE AG+KS T+ I G AYGW K E GVHRLVRISP+DS+SRR Sbjct: 121 WAGTFHGFTTEIVDKIDGEAAGLKSVTVKISGNGAYGWAKTESGVHRLVRISPFDSSSRR 180 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSF+S+ V P+ DD I+IEI E D RIDTYRASGAGGQHVN T+SAVRITH+P+G+VVQ Sbjct: 181 HTSFASVEVSPIADDKIDIEILEKDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVVQ 240 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 CQ RSQH+N+A+A+++LR++LYE+ELQ++E+ S+ +IGWG QIRSYV+ PY+M Sbjct: 241 CQTSRSQHQNRAEAYSLLRSRLYEMELQEKEKKMAQEHDSRCDIGWGHQIRSYVMHPYRM 300 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 VKDLRT E VLDGDLD F+ A L K Sbjct: 301 VKDLRTGHETGDVDAVLDGDLDKFIAAALTYK 332 >gi|317057134|ref|YP_004105601.1| peptide chain release factor 2 [Ruminococcus albus 7] gi|315449403|gb|ADU22967.1| peptide chain release factor 2 [Ruminococcus albus 7] Length = 378 Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats. Identities = 151/350 (43%), Positives = 230/350 (65%), Gaps = 3/350 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + L ++D +NA +++ L+ K +P W + ++++++++ ++L+ + + Sbjct: 20 IRELHDVYDIENAAEKIEELHEKAAEPGFWDDPEKSQVVLQQTRNLEGKVERYNKFNGAA 79 Query: 67 CDNLILLELALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 D +++E+A EED+ + + + L ++K +++ E+LL+GE D ++A L HA Sbjct: 80 DDIEVMIEMAAEEDEDTQAELVEEIKAELDKLKADLDAASLETLLTGEYDHSNAILNFHA 139 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+QDW ML+RMYT+WA+ F + ++I +G +AGIKS ++ I+G NAYG+LK Sbjct: 140 GAGGTEAQDWTEMLIRMYTKWADSHGFSAKIMDILEGGDAGIKSCSMFIEGENAYGYLKS 199 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G+HRLVRISP+DS+ RHTSFS++ V P +DD+IE+EI D ++ YRASGAGGQH+ Sbjct: 200 ESGIHRLVRISPFDSSGSRHTSFSAVEVMPELDDTIEVEIRPEDIEMEVYRASGAGGQHI 259 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SAVR+ H PTG+V CQ +RSQ +NK A ML+AKL E++ ++ E + + Sbjct: 260 NKTSSAVRLIHKPTGIVTACQTQRSQFQNKDYAMKMLKAKLIEIKEREHLEKIEDIKGVQ 319 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 EI WG QIRSYV PY +VKDLRT E + V+DGDLD F+ A L Sbjct: 320 KEIAWGSQIRSYVFMPYTLVKDLRTGFEYNNVKAVMDGDLDGFINAYLKA 369 >gi|33866841|ref|NP_898400.1| peptide chain release factor 2 [Synechococcus sp. WH 8102] gi|81573750|sp|Q7U3W6|RF2_SYNPX RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|33639442|emb|CAE08826.1| peptide chain release factor RF-2 [Synechococcus sp. WH 8102] Length = 374 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 147/352 (41%), Positives = 207/352 (58%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ +L D R L P W + A+ MR + + + + Sbjct: 12 ELTDRLGHAQDCLDVPALKARQQDLEQLAAQPDFWDDQQAAQKQMRRLDEVKAQLQQLAD 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D LEL E D +L E + L +++ ++ + E LLSG+ D A L + Sbjct: 72 WGGAVDDAKATLELYELEPDEEMLTEAQEGLNQLRQGLDRWELERLLSGDYDKEGAVLTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGT++QDWA MLLRMYTRWAE K E+ +GEEAGIKS T+ ++G AYG+L Sbjct: 132 NAGAGGTDAQDWAQMLLRMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEVEGRYAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E+G HRLVRISP+++N +R TSF+ I V P +D+ ++I+I E D + T R+ GAGGQ Sbjct: 192 RNEKGTHRLVRISPFNANDKRQTSFAGIEVMPKIDEEVDIDIPEKDLEVTTSRSGGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN ++AVRI HIPTG+ V+C QERSQ +NK +A +L+AKL + ++R Sbjct: 252 NVNKVETAVRILHIPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 E WG QIR+YV PYQMVKDLRT+ E V+DG LD F+ A+L Sbjct: 312 DIVEAAWGNQIRNYVFHPYQMVKDLRTSEETNDVQAVMDGALDPFIDASLRQ 363 >gi|239917286|ref|YP_002956844.1| bacterial peptide chain release factor 2 (bRF-2) [Micrococcus luteus NCTC 2665] gi|239838493|gb|ACS30290.1| bacterial peptide chain release factor 2 (bRF-2) [Micrococcus luteus NCTC 2665] Length = 373 Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 145/352 (41%), Positives = 215/352 (61%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D ++ L + P LW + EA+ + + H + I + Sbjct: 13 LRHTLASIEQVSDLDRIKADIAELEQQASAPDLWDDPEEAQKVTSKLSHRQTDLKRITSL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D ++ELA EED+ S+L + + L I+ +E + +LLSGE D DA + + Sbjct: 73 ESRIEDLETMVELAAEEDEPSLLDDANQELTSIRKALEELEVVTLLSGEYDQRDAVVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A L+RMY RWAE+R + T+ ++ EEAG+KS T + P A+G L Sbjct: 133 AGAGGVDAADFAETLMRMYLRWAEQRGWSTKVMDTSYAEEAGLKSVTFEVNAPFAFGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ IEI ES+ ++D +R+SG GGQ Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIESDDSIEIPESEIKVDVFRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV Q E+SQ +N+A A +L+++L L + + Sbjct: 253 VNTTDSAVRMTHLPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLLRKAEEDAKKKEMAGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E+ +PS V DG +DDF+ A + + Sbjct: 313 -VKASWGDQMRSYVLNPYQMVKDLRTGHEEGNPSSVFDGHIDDFVDAGIRWR 363 >gi|315445399|ref|YP_004078278.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp. Spyr1] gi|315263702|gb|ADU00444.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp. Spyr1] Length = 372 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 161/357 (45%), Positives = 221/357 (61%), Gaps = 8/357 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R+ L + DP LW + A+ + + H N + ++E+ Sbjct: 12 LDTTLTTVERVVDVDGLRGRIQQLESDASDPKLWDDQARAQKVTSDLSHAQNELRRVEEL 71 Query: 63 QDRLCDNLILLELALEED---DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + RL D +L ELA EE+ E L +++ ++ + +LLSGE D +A + Sbjct: 72 RSRLDDLPVLYELAAEEEGAGSSEAFAEADAELAKLREDIAGMEVRTLLSGEYDEREALV 131 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGG ++ DWA ML+RMY RWAE+ + E + EEAGIKSAT + P AYG Sbjct: 132 NIRSGAGGVDAADWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYG 191 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+SG G Sbjct: 192 NLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 251 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL E +KR E Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLE---RKRLEERAEM 308 Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 ++ K + G WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F++A + + Sbjct: 309 DALKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWR 365 >gi|300857995|ref|YP_003782978.1| peptide chain release factor RF-2 [Corynebacterium pseudotuberculosis FRC41] gi|300685449|gb|ADK28371.1| peptide chain release factor RF-2 [Corynebacterium pseudotuberculosis FRC41] gi|302205723|gb|ADL10065.1| Peptide chain release factor 2 (RF-2) [Corynebacterium pseudotuberculosis C231] gi|302330275|gb|ADL20469.1| Peptide chain release factor 2 (RF-2) [Corynebacterium pseudotuberculosis 1002] gi|308275958|gb|ADO25857.1| Peptide chain release factor 2 (RF-2) [Corynebacterium pseudotuberculosis I19] Length = 366 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 156/353 (44%), Positives = 217/353 (61%), Gaps = 3/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + R+ L + DP LW N A+ + E + + + Sbjct: 11 ELDATLTTIEKVMDPEELASRVRELEQQASDPTLWDNPDHAQKVTTELSSVQAQLKKLTS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ R+ D ++ ELA EE D + L + ++E + +++LSGE D+ +A + + Sbjct: 71 LRQRIDDMPVMYELAEEEGDDTELADEELAELTSEIESL--EVKTMLSGEYDAREAVINI 128 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMY RWAEK K + +I EEAGIKSAT ++ G YG L Sbjct: 129 RSGAGGVDAADWAEMLMRMYVRWAEKNDRKVDIYDISYAEEAGIKSATFVVHGEYMYGQL 188 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ I V PVV+ + I+I +S+ R+D YR+SG GGQ Sbjct: 189 SVEQGAHRLVRISPFDNQGRRQTSFAEIEVLPVVEQTDHIDIPDSEVRVDVYRSSGPGGQ 248 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + Q+ + + Sbjct: 249 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKRQEERAELDALGA 308 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG Q+RSYVL PYQMVKDLRTN E P VLDGDLD F++A + + Sbjct: 309 G-GNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPQKVLDGDLDGFLEAGIRWR 360 >gi|147834602|emb|CAN69654.1| hypothetical protein VITISV_010541 [Vitis vinifera] Length = 426 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 159/352 (45%), Positives = 231/352 (65%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++ ++ + W V RL L+ + P LW N + A + RE L + +K + Sbjct: 64 IALSIHLIKKRLQWKKLVVRLDVLSAQLNKPDLWDNPVHAGKISREHGMLMGKMKGVKNL 123 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L +++ +++LA EE+D + E+ L ++ + K+ E+LL+G+ DS Y+EV Sbjct: 124 EQELLEHIDMVKLAREENDPELESESLKALLGMRRNSKEKELEALLAGDHDSCSCYIEVQ 183 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA M+++MY WA++R + ++ GE AGIK AT+ + G ++G+ K Sbjct: 184 AGAGGTESMDWAAMVMQMYKMWAQRRGYGVTVVDEMPGETAGIKRATIKVDGEYSFGYAK 243 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVRISP+DS RRHTSF+++ V P+ D S ++I+ESD RI+ +RA GAGGQ Sbjct: 244 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDASSHVQINESDLRIERFRAGGAGGQ 303 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTT+SAVRI HIPTGV CQ ERSQH+NKA A +L+++L +LE+ ++ +I Sbjct: 304 HVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQLEISRQAQINAQHTQ 363 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 S T+I WG QIR+YVL PY+MVKDLRTN E + P VL+GDLD F+ + L+ Sbjct: 364 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSA 415 >gi|225549349|ref|ZP_03770322.1| peptide chain release factor 2 [Borrelia burgdorferi 94a] gi|225370207|gb|EEG99647.1| peptide chain release factor 2 [Borrelia burgdorferi 94a] Length = 348 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 150/347 (43%), Positives = 216/347 (62%), Gaps = 4/347 (1%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG FD + ++ + + W + A+ +++ + L N I +E+ +++ Sbjct: 3 KTFGGSFDKNEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIK 62 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L ++ ++ + + S E D+N+A+L +H+GAGG Sbjct: 63 DLSDL---CEIAENEKDTNGLEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGG 119 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DW ML RMY+R+AE++K+KTE +++ + E GIKS T+ IKG AYG LK E G+ Sbjct: 120 TEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGI 178 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRL+RISP+D+ +RHTSF+S++V PV+DD IEI I D RIDTYRASGAGGQHVN T Sbjct: 179 HRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTS 238 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHI TG+V Q Q +RSQHKNK A +L+++LYE K +E + +K EI Sbjct: 239 SAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEIS 298 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYV QPY +VKD RT E ++ + V+DG++D+F++ L K Sbjct: 299 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 345 >gi|194476812|ref|YP_002048991.1| peptide chain release factor 2 [Paulinella chromatophora] gi|171191819|gb|ACB42781.1| peptide chain release factor 2 [Paulinella chromatophora] Length = 354 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 149/343 (43%), Positives = 208/343 (60%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD R L P W +A+ MR+ + + +++ Q + D Sbjct: 3 RTVFDVPALKARQQDLEQLASQPKFWDLQDQAQKQMRQLDEVREQLEKLRQWQGTIADAK 62 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LEL E D S+L E ++ +QR+K ++ + E LL+G D A + ++AGAGGT++ Sbjct: 63 ATLELYNIEPDESMLNEGNEGMQRLKNNLDRWELERLLNGTYDKGGAVISINAGAGGTDA 122 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRW+E K EI +GEEAGIKS T I G AYG+L+ E+G HRL Sbjct: 123 QDWARMLLRMYTRWSEDHGMKVNICEISEGEEAGIKSVTFEIDGSYAYGYLRNEKGTHRL 182 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+++N +R TSF+ + V P +++ I++ I + D + T R+ GAGGQ+VN ++AV Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKLNEDIDMFIPDKDLEVTTSRSGGAGGQNVNKVETAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RI HIPTG+ V+C QERSQ +NK +A +L+AKL + ++R E WG Sbjct: 243 RILHIPTGLAVRCTQERSQLQNKEKAMALLKAKLMVIAQEQRAAEIADIRGEIVEAAWGN 302 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIR+YV PYQMVKDLRTN E T V+DGDLD F++A L Sbjct: 303 QIRNYVFHPYQMVKDLRTNKETTDVQGVMDGDLDLFIQALLRQ 345 >gi|325963891|ref|YP_004241797.1| bacterial peptide chain release factor 2 (bRF-2) [Arthrobacter phenanthrenivorans Sphe3] gi|323469978|gb|ADX73663.1| bacterial peptide chain release factor 2 (bRF-2) [Arthrobacter phenanthrenivorans Sphe3] Length = 371 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 141/352 (40%), Positives = 217/352 (61%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + D + + ++ L+ + +P LW + A+ + H + + + + Sbjct: 13 LRATYESIERVSDVEALKEDIAELSERAGEPDLWDDPSAAQKITSRLSHRQSELERLNNL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 R+ D +L+EL +EDD + + E + L+ IK ++ + +LLSGE D +A + + Sbjct: 73 ASRIDDLEVLVELGQDEDDAASMGEAAAELESIKKALKELEVVTLLSGEYDEREAVVSIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A ML+RMY RWAE+ + T ++ EEAG+KSAT +K P AYG L Sbjct: 133 AGAGGVDAADFAEMLMRMYLRWAERHGYPTTVMDTSYAEEAGLKSATFEVKAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ + IEI +++ R+D +R+SG GGQ Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDSIEIPDNEIRVDVFRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG VV Q E+SQ +N+A A +L+++L L+ ++ + Sbjct: 253 VNTTDSAVRLTHIPTGTVVSMQNEKSQLQNRAAAMRVLQSRLLLLKKEQEDAEKKALAGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + S V DG++DDF+ A + + Sbjct: 313 -VKASWGDQMRSYVLNPYQMVKDLRTEHEVGNTSAVFDGEIDDFIDAGIRWR 363 >gi|83593375|ref|YP_427127.1| peptide chain release factor 2 [Rhodospirillum rubrum ATCC 11170] gi|83576289|gb|ABC22840.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodospirillum rubrum ATCC 11170] Length = 322 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 204/309 (66%), Positives = 238/309 (77%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRER HL+ +++ + ++ + D L+EL EDD + E L + ++ E Sbjct: 1 MRERTHLEQSVAGYRALEREVDDAATLIELGDAEDDAESIAEGERMLHSAAQKARKQELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD NDAYLEVHAGAGGTE+QDWA +LLRMYTRWAE K E LE GEEAGI Sbjct: 61 SLLSGEADHNDAYLEVHAGAGGTEAQDWALILLRMYTRWAEAHGHKVEFLEESAGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G NAYGWLK E GVHRLVRISP+DS++RRHTSFSSIWVYPVVDD+IEI+I E Sbjct: 121 KSATIKIVGHNAYGWLKTESGVHRLVRISPFDSSARRHTSFSSIWVYPVVDDTIEIDIEE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 DCRIDTYRASGAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQH+NK W+MLRA+LY Sbjct: 181 KDCRIDTYRASGAGGQHVNRTESAVRITHIPTGIVVQCQSERSQHQNKDYCWSMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E ELQKREE E +KT+IGWG QIRSYVLQPYQM+KD RTN+E + VL+GDLD Sbjct: 241 EHELQKREEKTKALEDTKTDIGWGHQIRSYVLQPYQMIKDTRTNVETSDTQGVLNGDLDQ 300 Query: 346 FMKATLAIK 354 FM A+LA + Sbjct: 301 FMAASLAAR 309 >gi|289706413|ref|ZP_06502771.1| peptide chain release factor 2 [Micrococcus luteus SK58] gi|289556908|gb|EFD50241.1| peptide chain release factor 2 [Micrococcus luteus SK58] Length = 373 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 145/352 (41%), Positives = 216/352 (61%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D ++ L + P LW + EA+ + + H + I + Sbjct: 13 LRHTLASIEQVSDLDRIKADIAELEQQASAPDLWDDPEEAQKVTSKLSHRQTDLKRITSL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D ++ELA EED+ S+L++ + L I+ +E + +LLSGE D DA + + Sbjct: 73 ESRIEDLETMVELAAEEDEPSLLEDANQELTSIRKALEELEVVTLLSGEYDQRDAVVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A L+RMY RWAE+R + T+ ++ EEAG+KS T + P A+G L Sbjct: 133 AGAGGVDAADFAETLMRMYLRWAEQRGWSTKVMDTSYAEEAGLKSVTFEVNAPFAFGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ IEI ES+ ++D +R+SG GGQ Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIESDDSIEIPESEIKVDVFRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV Q E+SQ +N+A A +L+++L L + + Sbjct: 253 VNTTDSAVRMTHLPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLLRKAEEDAKKKEMAGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E+ +PS V DG +DDF+ A + + Sbjct: 313 -VKASWGDQMRSYVLNPYQMVKDLRTGHEEGNPSSVFDGHIDDFVDAGIRWR 363 >gi|221217380|ref|ZP_03588851.1| peptide chain release factor 2 [Borrelia burgdorferi 72a] gi|221192658|gb|EEE18874.1| peptide chain release factor 2 [Borrelia burgdorferi 72a] Length = 348 Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats. Identities = 151/347 (43%), Positives = 218/347 (62%), Gaps = 4/347 (1%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG FD + ++ + + W + A+ +++ + L N I +E+ +++ Sbjct: 3 KTFGGSFDKNEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIK 62 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L E+ ++ ++ + + S E D+N+A+L +H+GAGG Sbjct: 63 DLSDLFEI---AENEKDTNGLEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGG 119 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DW ML RMY+R+AE++K+KTE +++ + E GIKS T+ IKG AYG LK E G+ Sbjct: 120 TEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGI 178 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRL+RISP+D+ +RHTSF+S++V PV+DD IEI I D RIDTYRASGAGGQHVN T Sbjct: 179 HRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTS 238 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHI TG+V Q Q +RSQHKNK A +L+++LYE K +E + +K EI Sbjct: 239 SAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEIS 298 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYV QPY +VKD RT E ++ + V+DG++D+F++ L K Sbjct: 299 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 345 >gi|210620542|ref|ZP_03292090.1| hypothetical protein CLOHIR_00033 [Clostridium hiranonis DSM 13275] gi|210155256|gb|EEA86262.1| hypothetical protein CLOHIR_00033 [Clostridium hiranonis DSM 13275] Length = 349 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 164/344 (47%), Positives = 235/344 (68%), Gaps = 1/344 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 LFD + +++ E W++ A +++E + L + +++Q L D +L Sbjct: 3 LFDIERLKEKIIENEQDMERQDFWEDNENAHKVLQENKKLCETVEKFEQLQKNLEDIEVL 62 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEADSNDAYLEVHAGAGGTESQ 131 +EL LEEDD +++ + +V + ++LLSGE D N+A + ++AG GG ++Q Sbjct: 63 IELGLEEDDSEDIEKEVSDSINQLKDVIDEMTIQTLLSGEYDKNNAIVSINAGTGGLDAQ 122 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA MLLRMY RWAE R +K + L++ EAGIK+A +LI+G NAYG+LKGE+GVHR+V Sbjct: 123 DWAQMLLRMYIRWAEGRDYKVKLLDLISDPEAGIKTAVMLIQGDNAYGYLKGEKGVHRIV 182 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RISP+D + +RHTSF+S+ V P +D++IE+EI++SD +IDTYRASGAGGQHVNTTDSAVR Sbjct: 183 RISPFDPSGKRHTSFASVDVIPELDENIEVEINQSDLKIDTYRASGAGGQHVNTTDSAVR 242 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+PTG+ VQCQ ERSQH N+ A ML AKL +++ +++E + T+I WG Q Sbjct: 243 ITHLPTGITVQCQNERSQHLNREVAMRMLMAKLIDIKEMEQKEKIEDLQGKYTQITWGSQ 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IRSYV QPY+MVKD RTN E + V++G++D F+ + L KK Sbjct: 303 IRSYVFQPYKMVKDHRTNTETGNVDAVMNGNIDIFINSYLTRKK 346 >gi|320161067|ref|YP_004174291.1| peptide chain release factor 2 [Anaerolinea thermophila UNI-1] gi|319994920|dbj|BAJ63691.1| peptide chain release factor 2 [Anaerolinea thermophila UNI-1] Length = 351 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 154/346 (44%), Positives = 217/346 (62%), Gaps = 5/346 (1%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD + L L + E+P +W + A+ LM+ L I + R D L Sbjct: 4 RSIFDLSSREMLLEQLQKEAENPGIWDDPTSAQRLMKRIADLREEIEGWNQFLKRCQDGL 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L E +D S+ ++ + ++ E++ ++ +LLSG D +A L ++AGAGGT+S Sbjct: 64 EL----AESEDESLREDLEKEISALEKELQQRELTTLLSGPYDHENALLTINAGAGGTDS 119 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA+ML+RMY RW E+R F +E L+ +GEEAGIKS T+ + GP AYG+L+GE+GVHRL Sbjct: 120 QDWASMLMRMYLRWCERRGFDSEILDFSEGEEAGIKSVTIAVTGPYAYGYLRGEKGVHRL 179 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEI-EISESDCRIDTYRASGAGGQHVNTTDSA 249 VR+SP+D+ RRHTSF+ + V P + + +I+ D RID YR+S AGGQ+V +A Sbjct: 180 VRLSPFDAAHRRHTSFAQVEVLPEISNGDNEIQINPDDLRIDIYRSSSAGGQNVQKNATA 239 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG+VV CQ ERSQ +N+ A +LRA+L EL+ Q++E + WG Sbjct: 240 VRITHIPTGIVVSCQNERSQMQNRENAMRVLRARLAELKRQEQERQLAELRGEYIKAEWG 299 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 QIRSYVL PYQ+VKD RT E + VLDG+LD F++A L +K Sbjct: 300 SQIRSYVLHPYQLVKDHRTEYETGNTQAVLDGELDGFIEAYLRSQK 345 >gi|256828464|ref|YP_003157192.1| bacterial peptide chain release factor 2 (bRF- 2) [Desulfomicrobium baculatum DSM 4028] gi|256577640|gb|ACU88776.1| bacterial peptide chain release factor 2 (bRF- 2) [Desulfomicrobium baculatum DSM 4028] Length = 369 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 162/350 (46%), Positives = 222/350 (63%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + D +RL+ + + P W +++E+ L++ + + Sbjct: 13 QLDERFTDFWRRLDLRRNKERLNEIEKQISSPGAWDKPELLTPVLQEKTQLESRVDEWEA 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + L +E+A E +LQ + L+ + ++E Q +LLS D ++A LE+ Sbjct: 73 LLQARDNALEWVEMASTEQTQEMLQALEEALEEMSAKLEAAQMRTLLSDPEDVSEAILEI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA MLLRMY R+AE+ FK E L++ G+EAGIKS TL I GP AYG L Sbjct: 133 HPGAGGTESQDWAEMLLRMYRRFAERVGFKVELLDLLPGDEAGIKSVTLHIHGPYAYGQL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE+G HRL+RISP+DS+ RRHTSF+S+ VYP IEIEI + D R+D +R+SG GGQ Sbjct: 193 KGEKGTHRLIRISPFDSSGRRHTSFASVDVYPDAGQDIEIEIRDEDVRVDIFRSSGPGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+V QCQ E+SQHKNK A +L+A+LYELELQK Sbjct: 253 SVNTTDSAVRVTHIPTGLVAQCQNEKSQHKNKEAAMKVLKARLYELELQKIASERQAEYV 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +K I +G QIR+Y LQPY++VKD RT + ++ VLDG++D F+ L Sbjct: 313 AKGAIAFGSQIRTYTLQPYRLVKDHRTGTDTSNVDSVLDGNIDAFIHNYL 362 >gi|256824891|ref|YP_003148851.1| peptide chain release factor 2 [Kytococcus sedentarius DSM 20547] gi|256688284|gb|ACV06086.1| bacterial peptide chain release factor 2 (bRF-2) [Kytococcus sedentarius DSM 20547] Length = 370 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 142/354 (40%), Positives = 211/354 (59%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + + D ++L+ L ++ P LW + + + + + I+ Sbjct: 11 ELRTTMESVREVIDLPRLKEQLADLEQQSSAPDLWDDPENGQKVSAAMSRVRGEVERIES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + R+ D +L+E+ EE D L E + L I+ VE + +LLSGE D +A + + Sbjct: 71 MDSRIDDLEVLVEMGTEEGDAETLAEATKELAAIQAAVEKLEVRTLLSGEYDEREAVITI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG ++ D+A ML+RMY RWAE+ ++ T+ L+ EEAG+KS T + P AYG L Sbjct: 131 RAGAGGVDAADFAEMLMRMYLRWAERHEYPTKVLDTSYAEEAGLKSVTFEVNVPYAYGNL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISPYD+ RR TSF+++ V PV++ + IEI E++ ++D +R+SG GGQ Sbjct: 191 VVEGGTHRLVRISPYDNQGRRQTSFAAVEVVPVIEQTDSIEIPENEIKVDVFRSSGPGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L + Sbjct: 251 SVNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLQRKAEEAAERKELAG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQMVKDLRT E + V DGD+D F++A + K+ Sbjct: 311 D-IKASWGDQMRSYVLHPYQMVKDLRTEHEVGNTQSVFDGDIDGFIEAGIRWKR 363 >gi|313672869|ref|YP_004050980.1| bacterial peptide chain release factor 2 (brf-2) [Calditerrivibrio nitroreducens DSM 19672] gi|312939625|gb|ADR18817.1| bacterial peptide chain release factor 2 (bRF-2) [Calditerrivibrio nitroreducens DSM 19672] Length = 371 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 184/349 (52%), Positives = 248/349 (71%), Gaps = 3/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + ++ ++LS + +T DP W E+K L++E+ + + + Sbjct: 13 LKEKFKRFKNIVNEEHLKEKLSNIEKQTHDPDFWS-SKESKHLLKEQSSIKKFLDDWYYL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 R D +LLEL E ++ + +N +K V + + +L+GE D N+A L +H Sbjct: 72 VRRFEDMDVLLELQEEGENVAAE--IEENFTELKQIVNDFELKLILNGENDINNAILTIH 129 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTE+ DWANMLLRMY RWAE RKFK E L+ G+EAGIKSATL I GP AYG+LK Sbjct: 130 SGAGGTEANDWANMLLRMYIRWAENRKFKYEMLDYQAGDEAGIKSATLNIIGPYAYGYLK 189 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVR+SP+D+N++RHTSF+S++V P ++D ++I I+ESD +IDT+RA GAGGQH Sbjct: 190 GETGVHRLVRLSPFDANNKRHTSFASVFVLPEIEDDVDIVINESDLKIDTFRAGGAGGQH 249 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV CQ ERSQHKNKA A +L++KLYELE++K+ + N ESS Sbjct: 250 VNTTDSAVRITHLPTGIVVSCQNERSQHKNKAHALKILKSKLYELEMEKKNKEKNELESS 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 KTEI +G QIRSYVL PY+MVKDLRT E +P VLDG+LDDF+++ L Sbjct: 310 KTEINFGSQIRSYVLHPYKMVKDLRTRHETGNPDAVLDGELDDFIRSYL 358 >gi|260438124|ref|ZP_05791940.1| peptide chain release factor 2 [Butyrivibrio crossotus DSM 2876] gi|292809448|gb|EFF68653.1| peptide chain release factor 2 [Butyrivibrio crossotus DSM 2876] Length = 372 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 167/350 (47%), Positives = 230/350 (65%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 L L D DN +++ L ED W + ++ ++E + L +A + E++ Sbjct: 15 DEPLKELRSALDLDNKAKKIEELEMHMEDQGFWNDPETSQKKLKELKALKDAFTNYNELE 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 D +E+A EE+D SI+ + + + K E + +LLS E D+ +A L+++A Sbjct: 75 KLRDDARTFMEIADEENDTSIIPDIEELVNEFKNLFEKVRISTLLSEEYDNCNAILKLNA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTES DWA+MLLRMYTRWAE + + E L+ DG+EAG+KS T+ I G NAYG+LK Sbjct: 135 GAGGTESCDWASMLLRMYTRWAESKGYTVETLDYLDGDEAGVKSVTIQINGENAYGYLKS 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E+GVHRLVRISP+++N +R TSF S V P +++ ++++I+E D RIDTYR+SGAGGQH+ Sbjct: 195 ERGVHRLVRISPFNANGKRQTSFVSCDVMPDIEEDLDVDINEDDLRIDTYRSSGAGGQHI 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SA+RITHIPTG+VVQCQ ERSQH+NK +A ML+AKLY L+ Q+ E Sbjct: 255 NKTSSAIRITHIPTGIVVQCQNERSQHQNKDKAMQMLKAKLYLLKQQENAEKEAGIRGEV 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 EIGWG QIRSY+LQPY +VKD RTN E + VLDG++D F+ L Sbjct: 315 KEIGWGNQIRSYILQPYTLVKDHRTNAESGNAQAVLDGNIDLFLGEYLKW 364 >gi|325694230|gb|EGD36146.1| peptide chain release factor RF2 [Streptococcus sanguinis SK150] Length = 325 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 147/325 (45%), Positives = 204/325 (62%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ ++ L ++ + ++ ILL+ E++ E Sbjct: 1 MTEPDFWDDNIAAQKTSQDLNELKQTYENFHQMTELFDESEILLDFLAEDESVQGELEEK 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + LLS D+N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 61 LAELEK--MMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GP+AYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ +R+Q Sbjct: 179 EVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY+LE +K+ + + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKQVAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGDLD F+ A L + Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323 >gi|320540119|ref|ZP_08039774.1| peptide chain release factor RF-2 [Serratia symbiotica str. Tucson] gi|320029785|gb|EFW11809.1| peptide chain release factor RF-2 [Serratia symbiotica str. Tucson] Length = 325 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 174/324 (53%), Positives = 228/324 (70%), Gaps = 1/324 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P +W A+ L +ER L+ ++ I ++ D LLELA+E +D E Sbjct: 1 MEQPDVWNEPERAQALGKERAALEAIVATIDQLAQGGEDVNGLLELAVEAEDEETFNEAV 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L ++ +++E +F + SGE DS D YL++ AG+GGTE+QDWA+MLLRMY RWAE + Sbjct: 61 IELDQLMVKLERLEFCRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLLRMYLRWAEAKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FKTE +E DG+ A +KSAT+ I G A+GWL+ E GVHRLVR SP+DS RRHTSFSS+ Sbjct: 121 FKTEVIEESDGDVARLKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 ++YP VDD I++EI+ +D RID YRASGAGGQHVN T+SAVRITH+PT +VVQCQ +RSQ Sbjct: 181 FIYPEVDDDIDMEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 HKNK QA+ LRAKLY+ E+QK+ E +K++IGWG QIRSYVL +KDLRTN Sbjct: 241 HKNKDQAFKQLRAKLYDFEMQKKNADKQTMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTN 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 +E + VLDGDLD F++A+L Sbjct: 300 VETRNTQAVLDGDLDKFIEASLKA 323 >gi|255037742|ref|YP_003088363.1| peptide chain release factor 2 [Dyadobacter fermentans DSM 18053] gi|254950498|gb|ACT95198.1| bacterial peptide chain release factor 2 (bRF- 2) [Dyadobacter fermentans DSM 18053] Length = 357 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 153/350 (43%), Positives = 222/350 (63%), Gaps = 3/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ LG D+ N Q+L L +T P W + A+ +M+E + L + +E+ Sbjct: 9 LKARVEALGRYLDYANRKQQLGQLEQQTVQPEFWTDSARAEKVMKEIRGLKFWTNGYEEL 68 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 D + E ++ + KL + +F ++ E D A +E++ Sbjct: 69 ARLRDDLDTIWEFYEADEATEEEVDEEGKKLADKL--DEIEFRKMMGEEGDELPAVIEIN 126 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTESQDWA+ML+RMY WAEK +K +++ DG+ AG+KS TL I G AYG LK Sbjct: 127 AGAGGTESQDWASMLMRMYIMWAEKNGYKVRQVDLQDGDVAGVKSVTLEIDGEYAYGNLK 186 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DSN+RRHTSF+S++VYP+ DD+IEIE++ +D DTYR+ GAGGQ+ Sbjct: 187 SENGVHRLVRISPFDSNARRHTSFTSVYVYPLADDNIEIEVNMADITWDTYRSGGAGGQN 246 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++AVR+ H P+G+++ CQQERSQ NK A +L+++LY++EL+KR E+S Sbjct: 247 VNKVETAVRLHHKPSGIIIACQQERSQLMNKEVAIRLLKSRLYQIELEKRNSARAEVEAS 306 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K +I WG QIRSYVL + VKD RT+ + ++ VL+GD++ F+KA L Sbjct: 307 KRKIEWGSQIRSYVLDD-RRVKDHRTDYQTSNTEAVLNGDINAFIKAYLM 355 >gi|315226283|ref|ZP_07868071.1| peptide chain release factor RF2 [Parascardovia denticolens DSM 10105] gi|315120415|gb|EFT83547.1| peptide chain release factor RF2 [Parascardovia denticolens DSM 10105] Length = 396 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 140/353 (39%), Positives = 208/353 (58%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + D+ +++ L + P LW + A+ + + E Sbjct: 31 EARSKYETITQAVGLDSLRGKIAELEKQASAPGLWDDPETAQRVTSNLSASQAEYKRLTE 90 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 RL D L L +EE+D QE L+++ ++ + ++LL GE D+ A + + Sbjct: 91 AGQRLDDIDTLYSLGMEEEDEDSKQEAWSELKKLSKDLSDIEIQTLLDGEYDNRAAVVTI 150 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMY RWAE+ ++K + ++ EEAGIKSAT + P AYG L Sbjct: 151 RSGAGGVDAADWAQMLMRMYIRWAERHQYKVQVIDTSYAEEAGIKSATFRVDAPYAYGKL 210 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+NSRR TSF+++ V P+V+ + I++ +SD R+DTY + G GGQ Sbjct: 211 SVEGGTHRLVRISPFDNNSRRQTSFAAVEVIPLVEPTDHIDVPDSDVRVDTYMSHGPGGQ 270 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTT SAVR+TH+PTG+VV Q ERSQ +N+A A +L+++L L+ ++ Sbjct: 271 GVNTTYSAVRLTHLPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLKQEEEAAKKKELAG 330 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + P V DGD+D F+ A + + Sbjct: 331 D-IKASWGDQMRSYVLHPYQMVKDLRTGYETSDPQAVFDGDIDGFIDAGIRWR 382 >gi|157363562|ref|YP_001470329.1| peptide chain release factor 2 [Thermotoga lettingae TMO] gi|166977374|sp|A8F531|RF2_THELT RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|157314166|gb|ABV33265.1| peptide chain release factor 2 [Thermotoga lettingae TMO] Length = 367 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 173/350 (49%), Positives = 233/350 (66%), Gaps = 2/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + L D D L + ++ DP +W++ +A + ++ + + +S I E Sbjct: 12 ELREKYLNFVKLIDPDKLNMELKKMESEMSDPEIWKDQRKAGEISKKVRRIKELLSDISE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ D + + L E+D I Q+ +Q ++ + Q E +L+ D N+AYL + Sbjct: 72 IERNFEDIDV--GIELSEEDPGIAQDIEKIVQEVEKNIRRFQLELILNDPLDQNNAYLSI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTES DWA MLLRMY RWAE++ F E L+ GEEAG+KSAT+L+KG AYG+L Sbjct: 130 HPGAGGTESHDWAQMLLRMYMRWAERKGFIVELLDFQPGEEAGLKSATILVKGEYAYGYL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+D+ RRHTSF+S+ V P + D I++EI D RIDT+RASG GGQ Sbjct: 190 KHERGVHRLVRISPFDAAKRRHTSFASVNVVPEISDDIDVEIKPEDIRIDTFRASGHGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN TDSAVRITH+PTG+VV CQ ERSQH+NKA A +L+AKLY+LEL KR E + + Sbjct: 250 YVNRTDSAVRITHLPTGIVVSCQSERSQHQNKALAMKVLKAKLYQLELAKRREQLDEIQG 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 EI WG QIRSY+LQPY +VKD RT+IE + VLDG+LD F++A L Sbjct: 310 ELKEISWGNQIRSYILQPYTLVKDHRTDIETGNFDAVLDGELDQFIEAEL 359 >gi|210631232|ref|ZP_03296815.1| hypothetical protein COLSTE_00700 [Collinsella stercoris DSM 13279] gi|210160119|gb|EEA91090.1| hypothetical protein COLSTE_00700 [Collinsella stercoris DSM 13279] Length = 376 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 150/354 (42%), Positives = 202/354 (57%), Gaps = 3/354 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS +L + + A R++ L + P W + A+ M E + + + Sbjct: 17 LSARLTEVEAYLHIEEARGRVTELEEASAAPGFWDDAEAARAYMAELAQVKGDVGLVDRA 76 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV--EYKQFESLLSGEADSNDAYLE 120 +RL D LELA E +L + + S +GE D A L Sbjct: 77 HERLSDARAALELADEMGQDGAEFIAEAAAAAEELTRAIDEMELSSWFTGEFDHGSAILS 136 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + G GG E+QDW ML +MY ++ +R +K + E GI AT+ ++G +A+G Sbjct: 137 IKPGQGGLEAQDWTFMLFKMYMKYFARRGWKVTVNDCPAAEVIGIDRATITVEGKDAFGM 196 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ E GVHRLVRISP D+ RR T+F+ + V PV+ D IEIE++ D R+D Y ASG GG Sbjct: 197 LRAEAGVHRLVRISPTDAKKRRQTTFAGVEVIPVLPDDIEIEVAPDDIRVDVYHASGPGG 256 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA +L+A+LYELEL+KR E + Sbjct: 257 QGVNTTDSAVRVTHIPTGIVVTCQNERSQIQNKAACMQILKARLYELELEKRAETLDEIR 316 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAI 353 KTEIG+G QIRSYVL PYQMVKDLR+ +E ++ VL DGDLD F+ Sbjct: 317 GPKTEIGFGNQIRSYVLYPYQMVKDLRSGVETSNVDSVLEDGDLDPFIIGYHRW 370 >gi|237751447|ref|ZP_04581927.1| peptide chain release factor 2 [Helicobacter bilis ATCC 43879] gi|229372813|gb|EEO23204.1| peptide chain release factor 2 [Helicobacter bilis ATCC 43879] Length = 367 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 175/349 (50%), Positives = 238/349 (68%), Gaps = 2/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + D+ +RL +N W + +A + +E++ + +S E+ Sbjct: 13 LQNKAQNIAKILNPDSLQKRLDEINALESHQEFWNDAKKAGEITKEKRKCERILSTYTEM 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L E+A E D S L+ +N++ ++ ++ + E +LSGE DS +A + + Sbjct: 73 KAELDDARELFEIAESEGDSSTLELLFENVESLQSHIQKVEIEVMLSGEFDSTNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+ML RMY RW+E+R FK E L+ DGEEAGIK A +IKG NAYG+ K Sbjct: 133 PGAGGTESQDWASMLYRMYLRWSERRGFKVELLDYQDGEEAGIKGAAFIIKGENAYGYAK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ V P + + I+IEI + D RIDTYRASGAGGQH Sbjct: 193 SENGVHRLVRISPFDANAKRHTSFASVQVSPELSEDIDIEILDKDIRIDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SA+RITH PTG+VVQCQ +RSQHKNKA A ML++KLYELE K+ E + + Sbjct: 253 VNKTESAIRITHFPTGIVVQCQNDRSQHKNKATAMKMLQSKLYELERLKQSE--GVANAE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K+EIGWG QIRSYVL PYQ VKDLR+N + VLDGD+DD +++ L Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDLRSNYATSDTDGVLDGDIDDLIESVL 359 >gi|291544247|emb|CBL17356.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus sp. 18P13] Length = 375 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 160/350 (45%), Positives = 233/350 (66%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 QL LG + A L L + W + +++ +M++ + L+N + + + Sbjct: 15 RPQLKELGDVLQVARAQSELDDLRIQVTYDGFWDDAEKSQKVMQKIRKLENTVDKFRHLN 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 +L D + L++L +EEDD S +E +++ K E+E ++ +LL+GE D ++A L HA Sbjct: 75 QKLEDTIALIDLCMEEDDDSSNEEILQDVESFKEELEAEKLSTLLTGEYDGSNAILTFHA 134 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+QDWA ML RMY RWAE+ FK L+ DG+EAG+KSA++L++G NAYG+LK Sbjct: 135 GAGGTEAQDWAQMLYRMYNRWAERHDFKVSLLDYLDGDEAGLKSASMLVEGQNAYGFLKS 194 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR+SP+D++ RRHTSF+++ V P +DDS+E++I D ++D +R+SGAGGQH+ Sbjct: 195 EAGVHRLVRVSPFDASGRRHTSFAALEVMPEIDDSMEVDIRLEDVKMDVFRSSGAGGQHI 254 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SAVR+THIPTG+VV CQ +RSQ +N+ A MLR+KL E++ ++ E + + + Sbjct: 255 NKTSSAVRLTHIPTGIVVSCQTQRSQFQNRDFAMKMLRSKLVEIKEREHLEKISDIKGVQ 314 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 EI WG QIRSYV PY + KD RT E + S V+DGDLD F+ A L Sbjct: 315 KEIAWGAQIRSYVFMPYTLAKDHRTGFENGNISAVMDGDLDGFINAYLKA 364 >gi|148240661|ref|YP_001226048.1| peptide chain release factor 2 [Synechococcus sp. WH 7803] gi|147849200|emb|CAK24751.1| Protein chain release factor B [Synechococcus sp. WH 7803] Length = 356 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 148/343 (43%), Positives = 206/343 (60%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD R L P W + A+ MR + + + Q + D Sbjct: 3 RTVFDVPALNARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAMLQQLDTWQGAVSDAQ 62 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LEL E D +L E L +++ +++ + E LLSGE D A L ++AGAGGT++ Sbjct: 63 ATLELYDLEPDDDMLGEAQSGLTQLRRDLDRWELERLLSGEYDKEGAVLSINAGAGGTDA 122 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRWAE R K E+ +GEEAGIKSAT+ I+G AYG+L+ E+G HRL Sbjct: 123 QDWAQMLLRMYTRWAEDRGMKVTVDELSEGEEAGIKSATIEIEGRYAYGYLRNEKGTHRL 182 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+++N +R TSF+ + V P +++ ++I+I + D + T R+ GAGGQ+VN ++AV Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKLEEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RI H+PTG+ V+C QERSQ +NK +A +L+AKL + ++R E WG Sbjct: 243 RILHVPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIR+YV PYQMVKDLRT E V+DGDLD F++A L Sbjct: 303 QIRNYVFHPYQMVKDLRTQEETNDVQGVMDGDLDPFIQALLRQ 345 >gi|332662344|ref|YP_004445132.1| hypothetical protein Halhy_0347 [Haliscomenobacter hydrossis DSM 1100] gi|332331158|gb|AEE48259.1| hypothetical protein Halhy_0347 [Haliscomenobacter hydrossis DSM 1100] Length = 358 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 154/350 (44%), Positives = 221/350 (63%), Gaps = 3/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L LG D +N + ++ + DP W + A+ +++E + N ++ K Sbjct: 9 LRERLVSLGRYLDVENRLIQIEEQEQLSLDPTFWNDPKRAETILKELKSHKNWVAQYKAA 68 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + D +LLE E + + +E +F + L+ D + LE++ Sbjct: 69 EAEVDDAEVLLEFNKEGEATEEEVDQKYAEA--LAVIEGLEFHTTLNQPEDELNVVLEIN 126 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA ML RMY WA++R FK L DG+ AG+KSA++ I+G +G LK Sbjct: 127 AGAGGTEACDWAEMLYRMYMMWAQRRGFKFTELNRQDGDVAGLKSASIEIEGEYVFGLLK 186 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVR+SPY+S +R TSFSS++V+P+VDDSIEIEI+ +D DT+RASGAGGQH Sbjct: 187 GENGVHRLVRVSPYNSQGKRMTSFSSVFVHPMVDDSIEIEINPADLEWDTFRASGAGGQH 246 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVR+ H+P+G+V +CQQERSQH N+ +A ML+++LYE EL+K++ ES Sbjct: 247 VNKTESAVRVRHLPSGIVAECQQERSQHMNRDKAMQMLKSRLYERELEKQKAEKETIESG 306 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K + WG QIRSYVL + VKD RT + + VL+GD+D+F+KA L Sbjct: 307 KMKNEWGSQIRSYVLDD-RRVKDHRTGYQTSQTDAVLNGDIDEFLKAFLM 355 >gi|38233352|ref|NP_939119.1| peptide chain release factor 2 [Corynebacterium diphtheriae NCTC 13129] gi|76363349|sp|Q6NIM2|RF2_CORDI RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|38199612|emb|CAE49268.1| peptide chain release factor 2 [Corynebacterium diphtheriae] Length = 369 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 152/353 (43%), Positives = 217/353 (61%), Gaps = 2/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + + ++ R+ L + DP LW + A+ + E + + + Sbjct: 11 QLDSTLTTIEKVMNPEDLESRVRELEQQASDPTLWDDPDTAQKVTTELSSVQAKLKKLST 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ R+ D ++ EL +E+ L + L + +VE + +++LSGE DS +A + + Sbjct: 71 LRQRIDDLPVMYEL-ADEEGEDALALADEELAELTADVEALEVKTMLSGEYDSREAVINI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMY RWAEK K + +I EEAGIKSAT ++ G YG L Sbjct: 130 RSGAGGVDAADWAEMLMRMYIRWAEKNDHKVDIYDISYAEEAGIKSATFVVHGEYMYGQL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ I V PVV+ + I+I +S+ R+D YR+SG GGQ Sbjct: 190 SVEQGAHRLVRISPFDNQGRRQTSFAEIEVLPVVEQTDHIDIPDSEVRVDVYRSSGPGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + Q+ + + Sbjct: 250 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAELDALGA 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG Q+RSYVL PYQMVKDLRTN E P VLDGD+D ++A + + Sbjct: 310 G-GNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPQKVLDGDIDGLLEAGIRWR 361 >gi|326798108|ref|YP_004315927.1| hypothetical protein Sph21_0678 [Sphingobacterium sp. 21] gi|326548872|gb|ADZ77257.1| hypothetical protein Sph21_0678 [Sphingobacterium sp. 21] Length = 361 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 149/351 (42%), Positives = 218/351 (62%), Gaps = 2/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + L D D + ++ T P W + EA+ +++ + E Sbjct: 8 ELRDRAASLRRHLDIDAKQKEINQEQEITLKPDFWDHPKEAEKVLQSIKSKKVWTDSFDE 67 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D ++ + D + VE +F+++LS E D A L++ Sbjct: 68 LLQAIDDASVMFDFYQSGDASEQEADELFQEA--LKRVEELEFKNMLSAEEDQLTAILQI 125 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGGTES DWA ML+RMY W EK +K + +G+ AG+KS TL G AYG+L Sbjct: 126 TAGAGGTESCDWAAMLMRMYIMWGEKNGYKVTEQDFLEGDVAGVKSVTLQFDGNFAYGYL 185 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDD+IEIE+ +SD DT+R+ GAGGQ Sbjct: 186 KGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIEVKDSDIEWDTFRSGGAGGQ 245 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN ++AVR+ H P+G+V++ Q+ RSQ +NK A +L+++LYE+E++KR E E Sbjct: 246 NVNKVETAVRLHHKPSGIVIKNQESRSQLQNKDNAMRLLKSQLYEIEMRKRMETTAAIEG 305 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 SK +I WG QIR+YVL PY++VKDLRT E ++ VLDG+LD+F+K+ L Sbjct: 306 SKKKIEWGSQIRNYVLHPYKLVKDLRTGHETSNTQAVLDGELDEFLKSYLM 356 >gi|86739504|ref|YP_479904.1| peptide chain release factor 2 [Frankia sp. CcI3] gi|123751448|sp|Q2JEW7|RF2_FRASC RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|86566366|gb|ABD10175.1| bacterial peptide chain release factor 2 (bRF-2) [Frankia sp. CcI3] Length = 366 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 155/354 (43%), Positives = 220/354 (62%), Gaps = 4/354 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D + +R L + DP LW + A+ + R I+ ++ Sbjct: 11 QLDATLTGIETVLDVEGLRRRAEDLERQAADPDLWSDQDRAQAVTRRLSSTRGDIARVEG 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D +L E+ +L E + +L R+ ++ + +LLSGE D DA +++ Sbjct: 71 LRRRLDDIAAAADLGDED----LLAEAAADLPRLSSDIAGLEVRTLLSGEYDERDAIVQL 126 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG ++ DW MLLRMY RWAE+ + TE + + EEAG+KSAT +K P AYG L Sbjct: 127 SAGAGGVDAADWTAMLLRMYLRWAERHGYATEVFDTSEAEEAGLKSATFQVKAPYAYGTL 186 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVRISP+D+ +RR TSF+ + V PVV+ S ++I + D RID +R+SG GGQ Sbjct: 187 RSEHGVHRLVRISPFDNQNRRQTSFAGVEVTPVVELSDHVDIDDKDLRIDIFRSSGPGGQ 246 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A +L+AKL E + Sbjct: 247 GVNTTDSAVRITHLPTGIVVTCQNERSQLQNKAAAMIVLQAKLLERRRAEEAAEKQRITG 306 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 ++ +G QIR+YVL PYQMVKDLRT+ E ++ S VLDG+LDDF+ A + ++ Sbjct: 307 GPQDVSFGSQIRNYVLHPYQMVKDLRTDTETSNTSGVLDGELDDFIDAEIRWRR 360 >gi|57234653|ref|YP_181313.1| peptide chain release factor 2, programmed frameshift [Dehalococcoides ethenogenes 195] gi|57225101|gb|AAW40158.1| peptide chain release factor 2, programmed frameshift [Dehalococcoides ethenogenes 195] Length = 362 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 149/352 (42%), Positives = 211/352 (59%), Gaps = 2/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++ D ++ L + + P WQ+ A+ M++ + Sbjct: 7 ELKSRILSDMVRLDIAAKELEITELESASASPDFWQDQQNAQKAMKKLAANKRVSEVWRG 66 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ R+ D L L L +D S+ E + + E++ + SG+ DS +A L V Sbjct: 67 LEQRVNDLLELFAL--THEDPSLGNEIEREVNTLTAEIDTLEVGLAFSGQYDSRNALLTV 124 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGG ESQDWA MLLRM+ RWAEK+ F E L+ GEEAGIKSATL I+G AYG+L Sbjct: 125 HAGAGGVESQDWAGMLLRMFMRWAEKKGFGMEVLDQSPGEEAGIKSATLQIEGEYAYGFL 184 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRL+R+SP+D++ RHTSF+ + V P +DS++I+I D +ID +R+SG GGQ Sbjct: 185 KSEHGVHRLIRLSPFDADHARHTSFALVEVMPEAEDSVDIDIKPEDIKIDMFRSSGPGGQ 244 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +V +AVR+THIP+G+VV Q ERSQH+N+ A +L +KL +E+ KR E + Sbjct: 245 NVQKVSTAVRVTHIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKIKG 304 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + WG QIRSYVL PY+MVKD RT+ E + VL+G+LD F+ A L Sbjct: 305 ERISAEWGNQIRSYVLHPYKMVKDHRTDYEVGNAEAVLEGELDGFINAYLRQ 356 >gi|86143360|ref|ZP_01061762.1| Peptide chain release factor 2 [Leeuwenhoekiella blandensis MED217] gi|85830265|gb|EAQ48725.1| Peptide chain release factor 2 [Leeuwenhoekiella blandensis MED217] Length = 368 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 155/351 (44%), Positives = 222/351 (63%), Gaps = 2/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++L+ L D + KT DP+ W + EA+ MR + N + ++ Sbjct: 10 LVQRLDALKMHLGIDQKRVEIQNEEEKTFDPNFWNDPKEAEQFMRMLREKKNWVKDYEQA 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 D +LLE E D + + VE +F+++LS E D A L++ Sbjct: 70 VTLTEDLEVLLEFHKEGDASEEEVDKQYDKVTRL--VEAMEFKNMLSDEGDDLSAVLQIT 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML+RMY W+EK FK + L +G+ AGIK+ TL I+G A+GWLK Sbjct: 128 AGAGGTESCDWASMLMRMYLMWSEKNGFKVKELNYQEGDVAGIKTVTLEIEGAYAFGWLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DSN++RHTSF+S++VYP+ DDSIEI+I+ +D D R+SGAGGQ+ Sbjct: 188 SENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDSIEIDINPADISWDFARSSGAGGQN 247 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++ +TH PTG+V+ + RSQ +N+ +A ML+++LYE+EL+KR+ + E+ Sbjct: 248 VNKVETKAILTHHPTGIVIHNSETRSQLENREKAMQMLKSQLYEIELKKRQAARDEIEAE 307 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K I WG QIR+YVL PY+++KD+RT E + VLDGDLD+F+KA L + Sbjct: 308 KKSIEWGSQIRNYVLHPYKLIKDVRTGEETGNTDAVLDGDLDNFLKAYLMM 358 >gi|87123562|ref|ZP_01079413.1| Peptide chain release factor 2 [Synechococcus sp. RS9917] gi|86169282|gb|EAQ70538.1| Peptide chain release factor 2 [Synechococcus sp. RS9917] Length = 356 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 148/343 (43%), Positives = 205/343 (59%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD R L P W + A+ MR + + +++ + + D Sbjct: 3 RTVFDVPALKARQQDLEQLASQPDFWDDQPNAQKQMRRLDEVKAQLQQLEQWRGAIDDAQ 62 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LEL E D +L E + L ++ ++ + E LLSGE D A L ++AGAGGT++ Sbjct: 63 ATLELYDLEPDDDMLSEAQEGLTTLRHALDRWELERLLSGEYDKEGAVLSINAGAGGTDA 122 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRWAE K E+ +GEEAGIKSAT+ I G AYG+L+ E+G HRL Sbjct: 123 QDWAQMLLRMYTRWAEDHGMKVSVDELSEGEEAGIKSATIEIDGRYAYGYLRNEKGTHRL 182 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+++N +R TSF+ + V P ++D ++I+I + D + T R+ GAGGQ+VN ++AV Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKLEDEVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RI HIPTG+ V+C QERSQ +NK +A +L+AKL + ++R E WG Sbjct: 243 RILHIPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIR+YV PYQMVKDLRT E T V+DG LD F++A L Sbjct: 303 QIRNYVFHPYQMVKDLRTQEETTDVQGVMDGHLDPFIQALLRQ 345 >gi|19552028|ref|NP_600030.1| peptide chain release factor 2 [Corynebacterium glutamicum ATCC 13032] gi|62389691|ref|YP_225093.1| peptide chain release factor 2 [Corynebacterium glutamicum ATCC 13032] gi|145294961|ref|YP_001137782.1| peptide chain release factor 2 [Corynebacterium glutamicum R] gi|24638152|sp|Q8NS78|RF2_CORGL RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|166223627|sp|A4QCD3|RF2_CORGB RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|21323567|dbj|BAB98194.1| Protein chain release factor B [Corynebacterium glutamicum ATCC 13032] gi|41325026|emb|CAF19507.1| PEPTIDE CHAIN RELEASE FACTOR 2 [Corynebacterium glutamicum ATCC 13032] gi|140844881|dbj|BAF53880.1| hypothetical protein [Corynebacterium glutamicum R] Length = 368 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 154/353 (43%), Positives = 220/353 (62%), Gaps = 3/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + + R+ L + DP LW + A+ + E H+ + I + Sbjct: 11 ELDSTLTTIEKVLNPQEMSDRVRELEAQAADPSLWDDPDHAQQVTSELSHVQAELRKITD 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ R+ D I++ELA EED + + + L ++ ++ + +++LSGE D+ +A + + Sbjct: 71 LRQRIEDLPIMVELAEEEDGDTSI--AEEELADLRSLIDALEVKTMLSGEYDAREAVINI 128 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMYTRWAEK K + +I EEAGIKSAT ++ G YG L Sbjct: 129 RSGAGGVDAADWAEMLMRMYTRWAEKNGHKVDIYDISYAEEAGIKSATFVVHGDYMYGQL 188 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ + V PVV+ I+I ++D R+D YR+SG GGQ Sbjct: 189 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEKVDSIDIPDADVRVDVYRSSGPGGQ 248 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + Q+ + + Sbjct: 249 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAEMDALGA 308 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG Q+RSYVL PYQMVKDLRTN E P VLDGD+D ++A + + Sbjct: 309 G-GNASWGNQMRSYVLHPYQMVKDLRTNFEVNDPQKVLDGDIDGLLEAGIRWR 360 >gi|320106646|ref|YP_004182236.1| hypothetical protein AciPR4_1419 [Terriglobus saanensis SP1PR4] gi|319925167|gb|ADV82242.1| hypothetical protein AciPR4_1419 [Terriglobus saanensis SP1PR4] Length = 375 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 177/353 (50%), Positives = 234/353 (66%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + ++ L D + L+ + ++ DP +W + ++ LMRER+ L+ +S ++ Sbjct: 12 VRARVRDLREYLDSTRLKKDLARIEEQSSDPAIWADPARSQPLMRERKRLEGLLSDDADL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R D L + ++ E + + I+ +E + ++LS E D +A + VH Sbjct: 72 ERRSGDIDA--YFELGREGENVEPELAREIASIEQAIEKLESRTMLSEETDPLNAIVTVH 129 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA ML+RMY RW E++ FKTE EI DG+EAGIKSAT I G AYG L Sbjct: 130 PGAGGTESQDWAEMLMRMYLRWGERQGFKTEINEIQDGDEAGIKSATFTITGDFAYGLLS 189 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVRISP+DS RRHTSFSS++V P +DDSI I+I D RIDTYR+ G GGQH Sbjct: 190 GETGVHRLVRISPFDSAKRRHTSFSSVFVSPEIDDSIVIDIKPDDLRIDTYRSGGKGGQH 249 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+V CQ ERSQHKNK +A MLR++LYE EL K++ I+ E S Sbjct: 250 VNTTDSAVRITHLPTGIVAGCQNERSQHKNKDKAMKMLRSRLYEFELDKKKAISRKLEDS 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K EI +G QIRSYVLQPY+M KDLRT +E VLDGDL+ F++ L +++ Sbjct: 310 KLEINFGSQIRSYVLQPYRMAKDLRTRVEVGDVDRVLDGDLEPFIRGFLRMRR 362 >gi|269958738|ref|YP_003328525.1| peptide chain release factor 2 [Anaplasma centrale str. Israel] gi|269848567|gb|ACZ49211.1| peptide chain release factor 2 [Anaplasma centrale str. Israel] Length = 338 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 170/332 (51%), Positives = 226/332 (68%), Gaps = 2/332 (0%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 L+++ LW + AK L+ ER ++ ++ + ++ + + LL++A E D Sbjct: 2 EELDSRCSSASLWDDQENAKKLLSERARVEEVLASFRALEKEYAECVELLDVADESDSEF 61 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 + L +++ V K+ E + SGEAD + +L + GAGGTES DWA MLLRMY R Sbjct: 62 LDG-LWSALTQLERRVSQKKAECMFSGEADGSGCFLVIRPGAGGTESNDWAAMLLRMYVR 120 Query: 144 WA-EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 WA F TE ++ DGE AG+KS T+ I G AYGW K E GVHRLVRISP+DS+SRR Sbjct: 121 WAGTFHGFTTEIVDKIDGEAAGLKSVTVKISGNGAYGWAKTESGVHRLVRISPFDSSSRR 180 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSF+S+ V P+ DD I+IEI E D RIDTYRASGAGGQHVN T+SAVRITH+P+G+VVQ Sbjct: 181 HTSFASVEVSPIADDKIDIEILEKDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVVQ 240 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 CQ RSQH+N+A+A+++LR++LYE+ELQ++E+ S+ +IGWG QIRSYV+ PY+M Sbjct: 241 CQTSRSQHQNRAEAYSLLRSRLYEMELQEKEKKMAQEHDSRCDIGWGHQIRSYVMHPYRM 300 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 VKDLRT E VLDGDLD F+ A L K Sbjct: 301 VKDLRTGHETGDVDAVLDGDLDKFIAAALTYK 332 >gi|226305794|ref|YP_002765754.1| peptide chain release factor 2 [Rhodococcus erythropolis PR4] gi|229491026|ref|ZP_04384859.1| peptide chain release factor 2 [Rhodococcus erythropolis SK121] gi|259585230|sp|C0ZXD0|RF2_RHOE4 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|226184911|dbj|BAH33015.1| peptide chain release factor 2 [Rhodococcus erythropolis PR4] gi|229322142|gb|EEN87930.1| peptide chain release factor 2 [Rhodococcus erythropolis SK121] Length = 368 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 152/352 (43%), Positives = 216/352 (61%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + D + +R+ L + DP LW + A+ + + H + I + Sbjct: 12 LDTTLRTCESVVDVEELRRRIDELEHQAADPGLWNDQEHAQQVTSQLSHAQAELRRIVAL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++RL + IL ELA + + + + ++ ++ + +++LSGE D DA + + Sbjct: 72 RERLDEMPILYELAED-EGPDAVADADAERASLRDDIAAMEVKTMLSGEYDERDALINIR 130 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ DWA ML+RMY RWAEK + E + EEAG+KSAT IKGP YG L Sbjct: 131 SGAGGIDAADWAEMLMRMYIRWAEKHDYGVEVYDTSYAEEAGLKSATFAIKGPYTYGTLS 190 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+ + V PVV+ + IEI+E+D R+D YR+SG GGQ Sbjct: 191 VEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIEINENDIRVDVYRSSGPGGQS 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL ++ Q+ + + Sbjct: 251 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLAVKRQEERAEMDALKGD 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E +PS VLDGD+D F++A + + Sbjct: 311 -SGSSWGNQMRSYVLHPYQMVKDLRTEYEVNNPSAVLDGDIDGFLEAGIRWR 361 >gi|299144433|ref|ZP_07037513.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518918|gb|EFI42657.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 348 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 176/339 (51%), Positives = 234/339 (69%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 LFD ++ LN K D W N A+ ++RE+ H + I ++ + + L Sbjct: 4 LFDLSEMRNKVKELNDKQMDVGFWDNAENAQKVIREQNHYQSKIDKYDKLIKSINEAEDL 63 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 ++L EDD S + +L+ I+ + E+LL+GE DSN+ + +HAGAGGTE+QD Sbjct: 64 IDLMEMEDDYSFYGDLKLDLENIEKLSNDFKLETLLNGEYDSNNCIISIHAGAGGTEAQD 123 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA+ML RMY R+AEKR F+ E L++ EEAGIKS TLLI G NAYG+LKGE+GVHRLVR Sbjct: 124 WASMLNRMYVRYAEKRGFRVETLDMLKEEEAGIKSVTLLITGDNAYGYLKGEKGVHRLVR 183 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+D+N RRHTSF+S+ VYP +DD E+EI D +IDTYR+SGAGGQHVNTTDSAVRI Sbjct: 184 ISPFDANKRRHTSFASLDVYPQLDDDNEVEIKAEDLKIDTYRSSGAGGQHVNTTDSAVRI 243 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 THIPTG+VVQCQ ERSQ +N+ +A NML+AKL L ++++E + + ++I WG QI Sbjct: 244 THIPTGIVVQCQNERSQIQNRDKAMNMLKAKLIALAEEEKKEKIEDLQGNYSQIAWGSQI 303 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 RSYV QPY +VKD RTN E + V+DG LD+F+ + L Sbjct: 304 RSYVFQPYTLVKDHRTNTEIGDVNKVMDGYLDEFINSYL 342 >gi|160947120|ref|ZP_02094287.1| hypothetical protein PEPMIC_01052 [Parvimonas micra ATCC 33270] gi|158446254|gb|EDP23249.1| hypothetical protein PEPMIC_01052 [Parvimonas micra ATCC 33270] Length = 349 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 150/339 (44%), Positives = 211/339 (62%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 FD L +++ W + AK ++ ++L I + ++ D++ Sbjct: 3 HFDISKLEDEYKNLESQSFKEDFWNDSKSAKSILDNMKNLKFKIETFTSLSRKIEDSIEF 62 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 LE+ +E+ +E N+ I+ E + +L+ GE DSN+A LE+HAGAGGT++QD Sbjct: 63 LEILSDEEFMEYEKEALKNIYNIEKEYLSLKLNTLMVGEYDSNNAILEIHAGAGGTDAQD 122 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 W ML R+YTRW + F L+ + E GIKS TL + G NAYG+LKGE+GVHRLVR Sbjct: 123 WTEMLQRLYTRWINSKGFSFSILDYNSDTEGGIKSVTLKVDGKNAYGFLKGEKGVHRLVR 182 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISPYDS+++RHTSF+S+ V+P +++ +IEI+ D RIDTYR+ GAGGQHVN TDSAVRI Sbjct: 183 ISPYDSSNKRHTSFASVDVFPEIEEITDIEINPKDLRIDTYRSGGAGGQHVNKTDSAVRI 242 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 THIPTGV V CQ ERSQ N+ A L AKL ++ ++ E + ++I WG QI Sbjct: 243 THIPTGVTVSCQSERSQMFNRDTAMRQLIAKLLIIKQEENREKIEDIQGKYSQIAWGSQI 302 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 RSYV QPY +VKD RT E + V++G++D+F+ L Sbjct: 303 RSYVFQPYTLVKDHRTGYETGNVESVMNGNIDEFINQYL 341 >gi|332522300|ref|ZP_08398552.1| peptide chain release factor 2 [Streptococcus porcinus str. Jelinkova 176] gi|332313564|gb|EGJ26549.1| peptide chain release factor 2 [Streptococcus porcinus str. Jelinkova 176] Length = 327 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 149/325 (45%), Positives = 209/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L +++ + L + + E+D S+ E Sbjct: 1 MTEPDFWNDTISAQKTSQELNELKVKFDTFHNMENLSEETE--LYMEMLEEDESVKGELE 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++L ++ + + LLS D N+A LE+H G+GGTE+QDWA+ML RMYTR+ + Sbjct: 59 ESLLKLDQILAAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG+LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVETLDYQAGDEAGIKSVTLSFQGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q Sbjct: 179 EVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E +K+ E N + K EI WG QIRSYV PY MVKD RTN Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGD+D F+ A L + Sbjct: 299 FEVAQVDKVMDGDIDGFIDAYLKWR 323 >gi|299137096|ref|ZP_07030279.1| peptide chain release factor 2 [Acidobacterium sp. MP5ACTX8] gi|298601611|gb|EFI57766.1| peptide chain release factor 2 [Acidobacterium sp. MP5ACTX8] Length = 375 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 173/351 (49%), Positives = 235/351 (66%), Gaps = 1/351 (0%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 R+ G +FD + L+ + K DP +W + +++ LMRER+ L++ ++ E+ Sbjct: 12 RKYATCGSIFDSPRLKKELAVIEEKIADPAVWADAAKSQPLMRERKRLESQLADDAELAR 71 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 R D +L E + S+ + + + E + ++LS E D+ +A + VH G Sbjct: 72 RGEDIDAYFDLMREGEA-SVEPDLKREIDSLVAFSEALESRTMLSEENDTLNAIVTVHPG 130 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGGTESQDWA ML+RMY RWAE++ FKTE E+ DG+EAGIKSAT I G A+G + GE Sbjct: 131 AGGTESQDWAEMLMRMYLRWAERQGFKTEINELQDGDEAGIKSATFTITGDFAFGLIAGE 190 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHRLVRISP+D RRHTSF+S++V P +DDSI I+I D RIDTYR+ G GGQHVN Sbjct: 191 TGVHRLVRISPFDQAKRRHTSFASVFVSPEIDDSIVIDIKPDDLRIDTYRSGGKGGQHVN 250 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVRITH+PTG+V CQ ERSQHKNK +A MLR++LYE EL K++ ++ E SK Sbjct: 251 TTDSAVRITHLPTGIVAGCQNERSQHKNKEKAMKMLRSRLYEYELDKKKAVSRKLEDSKL 310 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 EI +G QIRSYVLQPY++ KDLRT +E VLDG+L+ F++ L +++ Sbjct: 311 EINFGSQIRSYVLQPYRIAKDLRTRVEVGDVDRVLDGELEPFIRGYLKMRR 361 >gi|269955834|ref|YP_003325623.1| peptide chain release factor 2 [Xylanimonas cellulosilytica DSM 15894] gi|269304515|gb|ACZ30065.1| peptide chain release factor 2 [Xylanimonas cellulosilytica DSM 15894] Length = 370 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 140/353 (39%), Positives = 214/353 (60%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + G+ D +++ L+ + P LW + A+ + ++ +K + Sbjct: 13 LRSTLESIEGVSDPVALQAKIAVLSEQASVPDLWDDPEAAQKITSALSATQAELNRVKSL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 R+ D L+EL E D L E + I+ +++ + +LLSGE D+ DA + + Sbjct: 73 GRRIDDVETLVELGQEMGDEDSLTEAEAEVVGIRKDLDALEVRTLLSGEYDARDAVVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A ML+RMY RWAE+ F T+ ++ EEAG+KSAT + P A+G L Sbjct: 133 AGAGGVDAADFAEMLMRMYLRWAERHGFPTKVMDTSYAEEAGLKSATFEVNAPYAFGNLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ + +EI ES+ ++D +R+SG GGQ Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIEQTDSVEIPESEIKVDVFRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L + Q+ Sbjct: 253 VNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLVRQQEEAAKKKELAGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVLQPYQMVKDLRT E + + V DG +D+F++A + ++ Sbjct: 313 -IKASWGDQMRSYVLQPYQMVKDLRTEHESGNTAAVFDGAIDEFIEAGIRWRR 364 >gi|331090528|ref|ZP_08339381.1| peptide chain release factor 2 [Lachnospiraceae bacterium 2_1_46FAA] gi|330405871|gb|EGG85399.1| peptide chain release factor 2 [Lachnospiraceae bacterium 2_1_46FAA] Length = 337 Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats. Identities = 155/331 (46%), Positives = 226/331 (68%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 L K E+P W++ ++ +MRE + L + + + + D +L+E+ E++D S Sbjct: 2 EELQKKIEEPGFWEDTETSQKIMRELKGLQSFLENAESLLTSYEDIAMLIEMVYEDNDES 61 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 ++ E +++ + E + +LLSG D ++A + +HAGAGGTES DWA+ML RMY+R Sbjct: 62 MVGEIRREIRQFEKNFEEIRINTLLSGPYDKDNAIVTLHAGAGGTESCDWASMLYRMYSR 121 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 WAE++ F L+ DG+ GIK+ T + G NAYG+L+ E+GVHRLVRISP++S +R Sbjct: 122 WAERKGFSISVLDYLDGDITGIKTVTFEVNGENAYGYLQSEKGVHRLVRISPFNSAGKRQ 181 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TSF+S V P ++D I+IEI+E D ++DTYRASGAGGQHVN T SA+RITH+PTG+VVQC Sbjct: 182 TSFASCDVIPDIEDEIDIEINEDDLKVDTYRASGAGGQHVNKTSSAIRITHLPTGIVVQC 241 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 Q ERSQH N+ +A ML+AKLY ++ Q++ + + EIG+G QIRSYV+QPY +V Sbjct: 242 QNERSQHSNREKAMQMLKAKLYLIKQQEQADKVSDIRGEVKEIGFGNQIRSYVMQPYTLV 301 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KD RTN+E + + VLDGD++ F+ A L + Sbjct: 302 KDHRTNVENGNVTAVLDGDIEPFINAYLKKR 332 >gi|149194096|ref|ZP_01871194.1| peptide chain release factor 2 [Caminibacter mediatlanticus TB-2] gi|149136049|gb|EDM24527.1| peptide chain release factor 2 [Caminibacter mediatlanticus TB-2] Length = 364 Score = 253 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 174/354 (49%), Positives = 238/354 (67%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L +L + + D +RL + DP+ W + + + +E+ + + K+ Sbjct: 12 ELENKLKNIESILKPDELQKRLDEITQMENDPNFWNDPKNSAKIQKEKNAILRKLEKYKK 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L DN + ELA E+D L E ++++ ++ + + E +LSGE D +A + + Sbjct: 72 AKNSLQDNKDMYELATMEEDEETLNEVFNDVKELEKIIRDLEIEVMLSGENDDKNAIITI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTES DWA+ML RMY R+AE+R +K + L+ G+EAGIK AT+L+KG NAYG+L Sbjct: 132 HPGAGGTESHDWASMLYRMYLRYAERRGWKVDILDYQAGDEAGIKDATILVKGENAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HRLVR+SP+DS RRHTSF+S+ V P +DD IEIEI E D RID YRASGAGGQ Sbjct: 192 KAENGIHRLVRVSPFDSGGRRHTSFASVQVSPEIDDDIEIEIDEKDIRIDVYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPTG+VV CQQ+RSQHKNK A+ ML++KLYELEL+KR+ Sbjct: 252 HVNKTESAVRITHIPTGIVVSCQQDRSQHKNKEMAFKMLKSKLYELELEKRKAEEEG--K 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K E+GWG QIRSYVL PYQ VKD R+N + D+LDGDLD+ ++ L ++ Sbjct: 310 PKDEMGWGHQIRSYVLFPYQQVKDNRSNKAYSKVDDILDGDLDEIIEDVLISQQ 363 >gi|78213950|ref|YP_382729.1| peptide chain release factor 2 [Synechococcus sp. CC9605] gi|78198409|gb|ABB36174.1| peptide chain release factor 2 [Synechococcus sp. CC9605] Length = 356 Score = 253 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 150/343 (43%), Positives = 206/343 (60%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD R L P W + A+ MR + +S + + + D Sbjct: 3 RTVFDVPALNARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAQLSQLGGWRGAVDDAQ 62 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LEL E D +LQE + L +++ ++ + E LLSGE D A L ++AGAGGT++ Sbjct: 63 ATLELYELEPDEDLLQEAQNGLNQLRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDA 122 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRWAE K E+ +GEEAGIKS T+ I+G AYG+L+ E+G HRL Sbjct: 123 QDWAQMLLRMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRL 182 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+++N +R TSF+ + V P +++ ++++I E D I T R+ GAGGQ+VN ++AV Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKIEEEVKLDIPEKDLEITTSRSGGAGGQNVNKVETAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RI HIPTG+ V+C QERSQ +NK +A +L AKL + ++R E WG Sbjct: 243 RILHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIR+YV QPYQMVKDLRTN E V+DG LD F+ A+L Sbjct: 303 QIRNYVFQPYQMVKDLRTNEETNDVQAVMDGALDPFIDASLRQ 345 >gi|317968157|ref|ZP_07969547.1| peptide chain release factor 2 [Synechococcus sp. CB0205] Length = 356 Score = 253 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 143/341 (41%), Positives = 207/341 (60%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD R L P W + A+ MR+ + + + + + + D Sbjct: 3 RTVFDVAALKARQQDLEQLASQPDFWDDQKLAQSKMRQLDEVKAQLEQLSQWKGAVADAE 62 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +E+ E D +L E+ L++++ +++ + E LLSG D A + ++AGAGGT++ Sbjct: 63 ATVEIYGLEPDDELLSESDAALKKLRADLDRWELERLLSGTYDKEGAVISINAGAGGTDA 122 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA ML+RMYTRWAE K E+ DGEEAGIKS T+ I+G AYG+L+ E+G HRL Sbjct: 123 QDWALMLMRMYTRWAEDHGMKVTVDELSDGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRL 182 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+++N +R TSF+ + V P +++ ++++I E D I T R+ GAGGQ+VN ++AV Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKIEEEVKLDIPEKDLEITTSRSGGAGGQNVNKVETAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RI HIPTG+ V+C QERSQ +NK +A +L AKL + ++R E WG Sbjct: 243 RILHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIR+YV PYQMVKDLRT E T V+DGDLD F+++ L Sbjct: 303 QIRNYVFHPYQMVKDLRTQHETTDVQGVMDGDLDPFIQSLL 343 >gi|317493835|ref|ZP_07952252.1| peptide chain release 2 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918162|gb|EFV39504.1| peptide chain release 2 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 320 Score = 253 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 175/318 (55%), Positives = 222/318 (69%), Gaps = 1/318 (0%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W A+ L +ER L+ ++ I ++ L D LLELA+E DD E L ++ Sbjct: 2 WNEPERAQALGKERSSLEEIVNTINQMTQGLDDVSGLLELAIEADDEETFNEAVVELDQL 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 ++ +F + SGE DS D Y+++ AG+GGTE+QDWA+MLLRM+ RWAE + FKTE + Sbjct: 62 DAKLAQLEFRRMFSGEYDSADCYIDIQAGSGGTEAQDWASMLLRMFLRWAEAKGFKTEII 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E DGE AG+KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSFSS +VYP V Sbjct: 122 EESDGEVAGLKSATVKISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEV 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK Q Sbjct: 182 DDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQ 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A L+AKLYE E+QK+ + E +K++IGWG QIRSYVL +KDLRT +E + Sbjct: 242 AMRQLKAKLYEYEMQKKNAEKQVMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNT 300 Query: 336 SDVLDGDLDDFMKATLAI 353 VLDGDLD F++A+L Sbjct: 301 QAVLDGDLDRFIEASLKA 318 >gi|295426388|ref|ZP_06819038.1| peptide chain release factor RF2 [Lactobacillus amylolyticus DSM 11664] gi|295063756|gb|EFG54714.1| peptide chain release factor RF2 [Lactobacillus amylolyticus DSM 11664] Length = 332 Score = 253 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 156/325 (48%), Positives = 208/325 (64%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P+ W + +A+ L+ E L E++ D LEL EE D + +E Sbjct: 1 MAEPNFWNDQDQAQKLISETNLLKEKRDSFLELKKEYEDETTALELIKEEPDKELQEEVE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +NL ++ + + L+SG+ DS++A +E+H GAGGTE+ DWA+MLLRMY R+ E Sbjct: 61 NNLTHLQSAFHNYELDLLMSGKYDSHNALVEIHPGAGGTEAMDWASMLLRMYQRYCESVG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E + GEEAG+KS ++ + G NAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 121 FKFEINDYEPGEEAGVKSVSIRVSGKNAYGMLKSENGVHRLVRISPFDSAKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DDSI+I+I D RID YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ Sbjct: 181 EVIPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A N LRAKL+ LE +K+ + + + EIGWG QIRSYV PY +VKDLRTN Sbjct: 241 LQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DG L F+ A L + Sbjct: 301 YETADVKGVMDGKLQPFIYAYLQWR 325 >gi|255542882|ref|XP_002512504.1| peptide chain release factor, putative [Ricinus communis] gi|223548465|gb|EEF49956.1| peptide chain release factor, putative [Ricinus communis] Length = 550 Score = 253 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 154/352 (43%), Positives = 225/352 (63%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +++ + + W + RL L+ + P LW + + A + RE L + Sbjct: 142 IAQSIQVIKKRLQWKKLMVRLDLLSVQLNKPDLWDDPVLAGKISREHGSLMAKRKEVTAF 201 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L +++ +++LA EEDD + E+ L ++ + K+ E+LL+GE DS Y+EV Sbjct: 202 ERELLEHIDMIKLAREEDDAELESESLKALFHMRRNSKEKELEALLAGEQDSCSCYIEVQ 261 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTES DWA M+++MY WA++R + ++ GE AGIK AT+ + G A+G+ K Sbjct: 262 SGAGGTESMDWAKMVMQMYKLWAQRRGYNVTVVDEMPGEIAGIKRATIKVDGEYAFGYAK 321 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVRISP+DS RRHTSF+++ V P+ D S ++I+ESD RI+ YR+ G GGQ Sbjct: 322 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGSTHVQINESDLRIERYRSGGPGGQ 381 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H NTT+SAVRI HIPTGV CQ ERSQH NKA A +L+++L +LE+ ++ ++ Sbjct: 382 HANTTESAVRIVHIPTGVTATCQNERSQHMNKASAMAVLQSRLDQLEMARQAQMNAQHTQ 441 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 S TEI WG QIR+YVL PY+MVKDLRTN E + P VL+G++D F+ + L+ Sbjct: 442 SLTEISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGEIDGFILSYLSA 493 >gi|222475212|ref|YP_002563628.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str. Florida] gi|255003190|ref|ZP_05278154.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str. Puerto Rico] gi|222419349|gb|ACM49372.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str. Florida] Length = 338 Score = 253 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 170/332 (51%), Positives = 226/332 (68%), Gaps = 2/332 (0%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 L+++ LW + AK L+ ER ++ ++ + ++ + + LL++A E D Sbjct: 2 EELDSRCSSASLWDDQENAKKLLSERARVEEVLASFRALEKEYAECVELLDVADESDSEF 61 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 + L +++ V K+ E + SGEAD + +L + GAGGTES DWA MLLRMY R Sbjct: 62 LDG-LWSALTQLERRVSQKKAECMFSGEADGSGCFLVIRPGAGGTESNDWAAMLLRMYIR 120 Query: 144 WA-EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 WA F TE ++ DGE AG+KS T+ I G AYGW K E GVHRLVRISP+DS+SRR Sbjct: 121 WAGTFHGFTTEIVDKIDGEAAGLKSVTVKISGNGAYGWAKTESGVHRLVRISPFDSSSRR 180 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSF+S+ V P+ DD I+IEI E D RIDTYRASGAGGQHVN T+SAVRITH+P+G+VVQ Sbjct: 181 HTSFASVEVSPIADDKIDIEILEKDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVVQ 240 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 CQ RSQH+N+A+A+++LR++LYE+ELQ++E+ S+ +IGWG QIRSYV+ PY+M Sbjct: 241 CQTSRSQHQNRAEAYSLLRSRLYEMELQEKEKKMAQEHDSRCDIGWGHQIRSYVMHPYRM 300 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 VKDLRT E VLDGDLD F+ A L K Sbjct: 301 VKDLRTGHETGDVDAVLDGDLDKFIAAALTYK 332 >gi|329946372|ref|ZP_08293939.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 170 str. F0386] gi|328527348|gb|EGF54346.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 170 str. F0386] Length = 373 Score = 253 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 143/357 (40%), Positives = 212/357 (59%), Gaps = 4/357 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + D + R++ L+ + P LW + A+++ H + ++ Sbjct: 11 RLRHTYASIAAVTDPEALRARIAELSEQASAPDLWDDPDSAQVVTSALSHAQADLKRVES 70 Query: 62 IQDRLCDNL---ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 + +R+ D L +D IL E +L I ++ + +LLSGE D DA Sbjct: 71 LGERIEDLEAMVELAGEEEGDDAAEILAEAESDLTAISKDLSDLEIRTLLSGEYDPRDAV 130 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + + +GAGG ++ D+A MLLRMYTRWAE+ ++ + L EEAG+KS T + P AY Sbjct: 131 VTIRSGAGGVDAADFAEMLLRMYTRWAERHEYPVKVLNTSYAEEAGLKSVTFEVHAPYAY 190 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G L E G HRLVRISP+D+ RR TSF+++ V P+++ + I+I E+D RID +R+SG Sbjct: 191 GTLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHIDIPETDIRIDVFRSSGP 250 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +N+A A +L+++L L+ Q+ + Sbjct: 251 GGQSVNTTDSAVRITHLPTGLVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQQEEDAKKKE 310 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQMVKDLRT+ E +P V DGD+D F+ A + +K Sbjct: 311 LAGD-VKASWGDQMRSYVLNPYQMVKDLRTSFEVGNPDSVFDGDIDGFIDAGIRWRK 366 >gi|329896805|ref|ZP_08271721.1| peptide chain release factor 2 [gamma proteobacterium IMCC3088] gi|328921560|gb|EGG28940.1| peptide chain release factor 2 [gamma proteobacterium IMCC3088] Length = 321 Score = 253 bits (645), Expect = 4e-65, Method: Composition-based stats. Identities = 168/317 (52%), Positives = 224/317 (70%), Gaps = 1/317 (0%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W + A+ L +ER L+ + I+ + + D LL+L + E+D L++ +Q++ Sbjct: 2 WDDPERAQALGKERAALEAIVVSIETLTEGANDTADLLDLVVAENDVDSLEDIKSEIQKL 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 ++ +F + SGE D N+AYL++ +G+GGTE+QDWA MLLRMY RW E + FKTE + Sbjct: 62 LAILDELEFRRMFSGEVDENNAYLDIQSGSGGTEAQDWAEMLLRMYLRWGEAKGFKTELI 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E GE AGIKSAT+ G A+GWL+ E GVHRLVR SP+DS +RRHTSF+S++V P + Sbjct: 122 ECSAGEVAGIKSATIKFDGDYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVSPEI 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DD+IEIEI+ +D R+DTYRASGAGGQHVN TDSAVR+TH+PTGVVVQCQ ERSQH+N+ Sbjct: 182 DDNIEIEINPADLRVDTYRASGAGGQHVNKTDSAVRLTHLPTGVVVQCQTERSQHQNRDN 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A +LR KLYELE+ KR E E SK +IGWG QIRSYVL +KDLRT +E ++ Sbjct: 242 AMKLLRGKLYELEMLKRSEKQQALEDSKADIGWGSQIRSYVLD-QSRIKDLRTGVETSNT 300 Query: 336 SDVLDGDLDDFMKATLA 352 VLDG +D F++A+L Sbjct: 301 QAVLDGAIDMFIQASLK 317 >gi|77164311|ref|YP_342836.1| peptide chain release factor 2 [Nitrosococcus oceani ATCC 19707] gi|254433270|ref|ZP_05046778.1| peptide chain release factor 2 [Nitrosococcus oceani AFC27] gi|76882625|gb|ABA57306.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrosococcus oceani ATCC 19707] gi|207089603|gb|EDZ66874.1| peptide chain release factor 2 [Nitrosococcus oceani AFC27] Length = 331 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 173/328 (52%), Positives = 228/328 (69%), Gaps = 1/328 (0%) Query: 25 FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84 ++ + P +W A+ L +ER L + ++ + E+ + L ELA+EE D Sbjct: 2 EVDRELAVPSVWDEPERAQQLGQERAQLQSVVAPLAELGGEIIQVRELFELAMEEGDEDT 61 Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 QE L ++ + +F+ + +GE D N+AYL++ AG+GGTE+QDWANMLLRMY RW Sbjct: 62 AQEIIAELDVVEQRLAKLEFQRMFAGEMDPNNAYLDIQAGSGGTEAQDWANMLLRMYLRW 121 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 EK FKTE E+ +GE AGIKSA + +G A+GWL+ E GVHRLVR SP+DS +RRHT Sbjct: 122 GEKHSFKTELTEVSEGEVAGIKSAAIRFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHT 181 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 SF+S++VYP VD+ I+IEI+ +D RIDTYRASGAGGQHVN TDSAVRITH+P+ +VVQCQ Sbjct: 182 SFASVFVYPEVDERIDIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHLPSSLVVQCQ 241 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 ERSQH+NKA A LRAKLYELE++ R+ E +K +IGWG QIR+YVL +K Sbjct: 242 SERSQHQNKAHAMAQLRAKLYELEMRNRQAEKQAAEEAKADIGWGSQIRNYVLD-QSRIK 300 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLA 352 DLRT IE + VLDGDLD F++A+L Sbjct: 301 DLRTGIEVGNTQGVLDGDLDSFIEASLK 328 >gi|289525504|emb|CBJ14981.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis Sweden2] Length = 368 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 159/342 (46%), Positives = 208/342 (60%), Gaps = 1/342 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 D + L L + W +V A + L +S E+++++ Sbjct: 20 RRSLDPEGKENELKELEQQAVQDGFWDDVARAGKISERIARLKQQLSEFNELKNKVSTIQ 79 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LE D + +E + ++ + LLSGE D N +L ++AGAGGTES Sbjct: 80 FFLEDEESSKDLEMQKELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTES 139 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DW MLLRMY RWA ++ E ++ DGE AGIK TL + G AYG+ K E GVHRL Sbjct: 140 CDWVEMLLRMYMRWASSHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRL 199 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+DSN++RHTSF S+ V+P +DD IE+EI D RIDTYR+SGAGGQHVN TDSAV Sbjct: 200 VRISPFDSNAKRHTSFVSVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAV 259 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PTG+VV CQ ERSQ +N+ NMLRA++Y+ LQ+R E NI +K EI WG Sbjct: 260 RITHFPTGIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGS 319 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351 QIR+YV QPY +VKD+RT E + ++DG+ LD F+KA L Sbjct: 320 QIRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYL 361 >gi|224534879|ref|ZP_03675448.1| peptide chain release factor 2 [Borrelia spielmanii A14S] gi|224513819|gb|EEF84144.1| peptide chain release factor 2 [Borrelia spielmanii A14S] Length = 350 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 148/347 (42%), Positives = 216/347 (62%), Gaps = 4/347 (1%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG FD ++ + + W + +A+ +++ ++ L N + E+ +++ Sbjct: 5 KTFGGSFDKKEIQAKIEKYEKEINQKNFWNDPKKAQKVIKAQRILKNKVDPWVELINKIK 64 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L ++ + ++ + + S E D+N A+L +H+GAGG Sbjct: 65 DLDDL---CEIIENEKDINSLEIEFNVLEKQYKDLLTISYFKEELDANGAFLTIHSGAGG 121 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DW ML RMY+R+AE++K+KTE +++ + E GIKS T+ IKG AYG LK E G+ Sbjct: 122 TEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGI 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRL+RISP+D+ +RHTSF+S++V PV+D+ IEI I D RIDTYRASGAGGQHVN T Sbjct: 181 HRLIRISPFDAAKKRHTSFASVFVDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHVNKTS 240 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHI TG+V Q Q +RSQHKNK A +L+++LYE K +E + +K EI Sbjct: 241 SAVRITHIETGIVTQSQSDRSQHKNKDMAMKVLKSRLYEYYKNKEDEKNKSKQDTKKEIS 300 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYV QPY +VKD RT E ++ + V+DG++D+F++ L K Sbjct: 301 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 347 >gi|158321505|ref|YP_001514012.1| peptide chain release factor 2 [Alkaliphilus oremlandii OhILAs] gi|158141704|gb|ABW20016.1| peptide chain release factor 2 [Alkaliphilus oremlandii OhILAs] Length = 340 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 151/329 (45%), Positives = 213/329 (64%), Gaps = 1/329 (0%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 L K + W + A+ ++++ + + I ++ D +++ + D+ Sbjct: 6 EELEYKMSEEDFWNDPENAQSVLKKAKGYRDTIEEYNQLHVDHEDLEMMISFIEDGDESF 65 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 ++ V + +LL GE D N+A + +HAG GG ++QDWA MLLRMYTR Sbjct: 66 QKDLLKGLEA-LENRVREIKIATLLKGEYDKNNAIISIHAGTGGLDAQDWAKMLLRMYTR 124 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 WAE + + + L+I EAGIKS TLLI+G NAYG+LK E+GVHRLVRISP+DS+ +RH Sbjct: 125 WAEDKGYGVKTLDILTDTEAGIKSVTLLIEGMNAYGYLKAEKGVHRLVRISPFDSSGKRH 184 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TSF+S+ V P +DDS++I+I+ +D RIDTYRASG+GGQHVN TDSAVRITHIPTG+VVQC Sbjct: 185 TSFASVDVMPEIDDSVDIQINPNDLRIDTYRASGSGGQHVNKTDSAVRITHIPTGIVVQC 244 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 Q ERSQH N+ A ML +KL E++ +++E + +I WG QIRSYV PY +V Sbjct: 245 QNERSQHSNRETAMKMLISKLIEVKETEQKEKIEDLQGEYNQIAWGSQIRSYVFNPYNLV 304 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 KD RTN+E + V+DG++D+F+ L Sbjct: 305 KDHRTNVEMGNIQAVMDGEIDEFINGYLK 333 >gi|116072022|ref|ZP_01469290.1| peptide chain release factor 2 [Synechococcus sp. BL107] gi|116065645|gb|EAU71403.1| peptide chain release factor 2 [Synechococcus sp. BL107] Length = 356 Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats. Identities = 145/343 (42%), Positives = 203/343 (59%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD R L P W + A+ MR + + + + + + D Sbjct: 3 RTVFDVPALNARQQDLEQLAAQPDFWNDQQNAQKQMRRLDEVKAQLKQLADWRSAIDDAK 62 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LEL E D +L E L ++ ++ + E LLSGE D A L ++AGAGGT++ Sbjct: 63 ATLELYELEADEDMLGEAQQGLTELRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDA 122 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRWAE + EI +GEEAGIKSAT+ ++G AYG+L+ E+G HRL Sbjct: 123 QDWAQMLLRMYTRWAEDHDMRVTIDEISEGEEAGIKSATIEVEGRYAYGYLRNEKGTHRL 182 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+++N +R TSF+ I V P +++ ++I+I + D + T R+ GAGGQ+VN ++AV Sbjct: 183 VRISPFNANDKRQTSFAGIEVMPKLEEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RI H+PTG+ V+C QERSQ +NK +A +L+AKL + ++R E WG Sbjct: 243 RIQHLPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIR+YV PYQMVKDLRT E V+DG LD F+ A+L Sbjct: 303 QIRNYVFHPYQMVKDLRTQEETNDVQAVMDGALDPFIDASLRQ 345 >gi|256424469|ref|YP_003125122.1| peptide chain release factor 2 [Chitinophaga pinensis DSM 2588] gi|256039377|gb|ACU62921.1| bacterial peptide chain release factor 2 (bRF- 2) [Chitinophaga pinensis DSM 2588] Length = 362 Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats. Identities = 146/353 (41%), Positives = 228/353 (64%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + +L+ LGG D + + ++ T P W + A +++E + + + + Sbjct: 9 MRDRLHVLGGFLDVQDRIAKIENDKQLTLAPGFWDDNARATSILKEIKVNKFWVDLYENV 68 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 Q + D+ +LL+ E + + + ++ +F+S L+ D A L ++ Sbjct: 69 QTSIEDSAVLLDFQKEGEASEEEVAQAYHAAT--EALDELEFKSTLNEPEDEMPAVLTIN 126 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDWA MLLRMY + EK+ +K +++ G+ AGIKSA+L + G AYG LK Sbjct: 127 SGAGGTESQDWAEMLLRMYRMYGEKQGWKVSEIDVQYGDGAGIKSASLEMDGSFAYGLLK 186 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N+RRHTSF+SI+VYP+VDD+IEI ++ +D + YR+ G GGQ+ Sbjct: 187 AESGVHRLVRISPFDANARRHTSFASIFVYPLVDDTIEIAVNPADLVWEFYRSGGKGGQN 246 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++AVR+ H+P+G++++CQQ R+Q +N+ +A ML+++LYE EL+KREE+ N ++ Sbjct: 247 VNKVETAVRLKHVPSGIIIECQQARTQGENREKALTMLKSRLYEEELRKREELKNAANAN 306 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K +I WG QIRSYV PY+M+KD RT+ E + V+DG+L+ F+KA L + K Sbjct: 307 KRKIEWGSQIRSYVFHPYKMIKDHRTDYEVGNVQPVMDGELEGFIKAYLMMSK 359 >gi|125543555|gb|EAY89694.1| hypothetical protein OsI_11230 [Oryza sativa Indica Group] Length = 468 Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats. Identities = 156/351 (44%), Positives = 222/351 (63%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +++ + + W ++R L+ E P LW + + A + RE L I + + Sbjct: 111 VAQSVKLIKKRLKWGWILERSRQLSVVLERPDLWDDPVFAGKVSREHGELMGKIKSVNQF 170 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L +++ +L LA EEDD + ET L ++ + K+ +LLSG+ DS ++EV Sbjct: 171 EQELMEHIDMLRLAREEDDNELETETMRALAEMRRSAKEKELNALLSGDNDSCSCFIEVQ 230 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA M++ MY+ WA++R + +E GE AGIK AT+ + G A+G+ K Sbjct: 231 AGAGGTESMDWAAMVMNMYSSWAQRRGYTVSIIEEMPGEIAGIKRATIKVDGEYAFGYAK 290 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVRISP+DS RRHTSF+++ V P+ D S +I +SD RI+ +R+ G GGQ Sbjct: 291 AEVGVHRLVRISPFDSGKRRHTSFAAVAVVPILGDGSTRYQIKDSDLRIERFRSGGPGGQ 350 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H N T+SAVRI HIPTG+ CQ ERSQH NKA A +L+++L +LE+ ++ ++ Sbjct: 351 HANCTESAVRIVHIPTGITATCQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNADHTQ 410 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 S +EI WG QIRSYVL PY+MVKDLRTN E + P VL+GDLDDF+ L+ Sbjct: 411 SLSEISWGNQIRSYVLHPYRMVKDLRTNYEVSDPDSVLNGDLDDFILNFLS 461 >gi|115452569|ref|NP_001049885.1| Os03g0305700 [Oryza sativa Japonica Group] gi|108707729|gb|ABF95524.1| peptide chain release factor 2 family protein, expressed [Oryza sativa Japonica Group] gi|113548356|dbj|BAF11799.1| Os03g0305700 [Oryza sativa Japonica Group] gi|215707188|dbj|BAG93648.1| unnamed protein product [Oryza sativa Japonica Group] Length = 468 Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats. Identities = 156/351 (44%), Positives = 222/351 (63%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +++ + + W ++R L+ E P LW + + A + RE L I + + Sbjct: 111 VAQSVKLIKKRLKWGWILERSRQLSVVLERPDLWDDPVFAGKVSREHGELMGKIKSVNQF 170 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L +++ +L LA EEDD + ET L ++ + K+ +LLSG+ DS ++EV Sbjct: 171 EQELMEHIDMLRLAREEDDNELETETMRALAEMRRSAKEKELNALLSGDNDSCSCFIEVQ 230 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA M++ MY+ WA++R + +E GE AGIK AT+ + G A+G+ K Sbjct: 231 AGAGGTESMDWAAMVMNMYSSWAQRRGYTVSIIEEMPGEIAGIKRATIKVDGEYAFGYAK 290 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVRISP+DS RRHTSF+++ V P+ D S +I +SD RI+ +R+ G GGQ Sbjct: 291 AEVGVHRLVRISPFDSGKRRHTSFAAVAVVPILGDGSTRYQIKDSDLRIERFRSGGPGGQ 350 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H N T+SAVRI HIPTG+ CQ ERSQH NKA A +L+++L +LE+ ++ ++ Sbjct: 351 HANCTESAVRIVHIPTGITATCQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNADHTQ 410 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 S +EI WG QIRSYVL PY+MVKDLRTN E + P VL+GDLDDF+ L+ Sbjct: 411 SLSEISWGNQIRSYVLHPYRMVKDLRTNYEVSDPDSVLNGDLDDFILNFLS 461 >gi|21909990|ref|NP_664258.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS315] gi|21904179|gb|AAM79061.1| putative peptide chain release factor 2 [Streptococcus pyogenes MGAS315] Length = 326 Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats. Identities = 147/325 (45%), Positives = 208/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L +Q+ + +LLE+ ++D + +E Sbjct: 1 MTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEM--LDEDDFLKEELE 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +NL ++ + LLS D N+A LE+H G+GGTE+QDW ++LLRMYTR+ Sbjct: 59 ENLMQLDKITGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRMYTRFGNANG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q Sbjct: 179 EVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV PY MVKD RTN Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DG+++ F+ A L + Sbjct: 299 FELAQVDKVMDGEINGFIDAYLKWR 323 >gi|332671116|ref|YP_004454124.1| peptide chain release factor 2 [Cellulomonas fimi ATCC 484] gi|332340154|gb|AEE46737.1| peptide chain release factor 2 [Cellulomonas fimi ATCC 484] Length = 382 Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats. Identities = 142/354 (40%), Positives = 216/354 (61%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D +++ L+ + P+LW + A+ + + + + Sbjct: 24 ELRTTLESIQAVSDPTALKAKIALLSEQASVPNLWDDPDAAQKVTSALSATQAELDRVAK 83 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + R+ D L+EL +E +D L E L I+ ++ + +LL+GE D +A + + Sbjct: 84 LGGRIDDLETLVELGVEMEDEDSLAEAEVELTGIRKDLGELEVRTLLNGEYDQREAVVTI 143 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A MLLRMY RWAE+ + T L+ EEAG+KSAT +K P A+G L Sbjct: 144 RSGAGGVDAADFAEMLLRMYLRWAERHGYPTTVLDTSYAEEAGLKSATFEVKAPYAFGHL 203 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+++ + IEI ES+ ++D +R+SG GGQ Sbjct: 204 SVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDSIEIPESEIKVDVFRSSGPGGQ 263 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L + + + Sbjct: 264 SVNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLVRKAEEDAKKKELAG 323 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVLQPYQMVKDLRT E +PS V DGD+DDF++A + ++ Sbjct: 324 D-IKASWGDQMRSYVLQPYQMVKDLRTEHEVGNPSAVFDGDIDDFIEAGIRWRR 376 >gi|66044558|ref|YP_234399.1| peptide chain release factor 2 [Pseudomonas syringae pv. syringae B728a] gi|63255265|gb|AAY36361.1| Peptide chain release factor 2 [Pseudomonas syringae pv. syringae B728a] Length = 329 Score = 252 bits (644), Expect = 5e-65, Method: Composition-based stats. Identities = 175/327 (53%), Positives = 235/327 (71%), Gaps = 1/327 (0%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 N + EDP++W N A+ L RER L + + E+ L D LL ++ EE+D + + Sbjct: 2 NRELEDPNVWNNPAYAQELGRERSLLAQIVETLDEMSSGLADAKDLLLMSAEEEDQAAVD 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 + + ++R++ +E +F + SG+ D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+ Sbjct: 62 DVAAEVERLRESLEKLEFRRMFSGDMDPNNAYLDIQAGSGGTEAQDWANILLRMYLRWAD 121 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 KR F +E+ GE AGIK AT+ IKG A+GWL+ E GVHRLVR SP+DS +RRHTSF Sbjct: 122 KRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSF 181 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 S+++V P +DD+IEI+I+ +D RIDTYR+SGAGGQHVNTTDSAVRITH+PT VV CQ E Sbjct: 182 SAVFVSPEIDDNIEIDINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVSCQNE 241 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQH NK A MLRA+LYE E+QKR + E +K++IGWG QIRSYVL +KDL Sbjct: 242 RSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTKSDIGWGHQIRSYVLD-ASRIKDL 300 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAI 353 RTNIE++ VLDGD+D+++ A+L Sbjct: 301 RTNIERSDCDKVLDGDIDEYLIASLKQ 327 >gi|88607992|ref|YP_506484.1| peptide chain release factor 2, programmed frameshift [Neorickettsia sennetsu str. Miyayama] gi|123491729|sp|Q2GDG2|RF2_NEOSM RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|88600161|gb|ABD45629.1| peptide chain release factor 2, programmed frameshift [Neorickettsia sennetsu str. Miyayama] Length = 365 Score = 252 bits (643), Expect = 6e-65, Method: Composition-based stats. Identities = 172/351 (49%), Positives = 244/351 (69%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + D + RL + + P LW++ A++L++E+ ++ ++ KE+ Sbjct: 12 LKKSVEVIRRQLDIEKKHSRLEEIQALVDSPTLWEDQSRAQLLLKEKSQIETSLKEFKEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 +L D + ++ELA ++ + +++ L +K +++ K+ E L SGEAD ND LE+ Sbjct: 72 SIQLDDLIEMIELASKDHEEETMKDLERELLLLKEKIQKKEIECLFSGEADGNDCLLEIQ 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGGTES DWA MLLRMYTRWAE KF+ + ++ +GEE GIKS TL + G NAYGW Sbjct: 132 SGAGGTESNDWAMMLLRMYTRWAEIYHKFQVQIVDKVEGEETGIKSCTLKVMGKNAYGWA 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVRISP+D+N++RHTSF+ I+V P ++ I I I E D +IDTYRASGAGGQ Sbjct: 192 RTETGVHRLVRISPFDANAKRHTSFAKIFVSPCIEGEINISIDEKDLKIDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SA+RITH+P+ +VVQ Q RSQH+NKA+A ML+++LYE+EL+K+EE N + Sbjct: 252 HVNKTESAIRITHLPSKIVVQSQSSRSQHQNKAEAMQMLKSRLYEIELRKKEEKLNAARN 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + IGWG QIRSYVL PYQM+KDLRT E + + VLDGDLD F+ AT++ Sbjct: 312 VEDSIGWGYQIRSYVLHPYQMIKDLRTGHEVGNITSVLDGDLDSFIIATIS 362 >gi|139438906|ref|ZP_01772366.1| Hypothetical protein COLAER_01370 [Collinsella aerofaciens ATCC 25986] gi|133775617|gb|EBA39437.1| Hypothetical protein COLAER_01370 [Collinsella aerofaciens ATCC 25986] Length = 382 Score = 252 bits (643), Expect = 6e-65, Method: Composition-based stats. Identities = 145/355 (40%), Positives = 205/355 (57%), Gaps = 5/355 (1%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + +L + D R+S L K+ P W + A+ M E I+ + + Sbjct: 16 ADRLGEVESYLHLDEKRTRVSELEAKSVAPGFWDDADAARATMEEIARTKEDIAAVDTAR 75 Query: 64 DRLCD----NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 L D + E+ + D ++ +E + +R+ ++ + S +GE D DA + Sbjct: 76 GELSDARAALELAEEMGDDPDAAALREEAAATAERLARAIDELELSSWFTGEFDHGDAIV 135 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + G GG E+QDW ML +MY ++ ++R +K + E GI AT ++G +A+G Sbjct: 136 TIKPGQGGLEAQDWTFMLFKMYMKYCQRRGWKVTINDCPAAEVIGIDRATFTVEGKDAFG 195 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L+ E GVHRLVRISP D RR T+F+ + V PV+ D I+IEIS D R+D Y ASG G Sbjct: 196 MLRAEAGVHRLVRISPTDDKRRRQTTFAGVEVIPVLPDDIDIEISPDDIRVDVYHASGPG 255 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+TH P+G+VV CQ ERSQ +NKA +L+A+LYE+EL+KR E + Sbjct: 256 GQGVNTTDSAVRVTHFPSGIVVTCQNERSQIQNKAACMQILKARLYEIELEKRAEALDEI 315 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAI 353 KT IG+G QIRSYVL PYQMVKDLR+ +E ++ VL DGDLD F+ Sbjct: 316 RGPKTTIGFGNQIRSYVLYPYQMVKDLRSGVETSNVEAVLDDGDLDPFVIGYHRW 370 >gi|313889933|ref|ZP_07823573.1| peptide chain release factor 2 [Streptococcus pseudoporcinus SPIN 20026] gi|313121699|gb|EFR44798.1| peptide chain release factor 2 [Streptococcus pseudoporcinus SPIN 20026] Length = 327 Score = 252 bits (643), Expect = 6e-65, Method: Composition-based stats. Identities = 149/325 (45%), Positives = 208/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L +++ + L + + E+D S+ E Sbjct: 1 MTEPDFWNDTIAAQKTSQELNELKVKFDTFHNMENLSEETE--LYMEMLEEDESVKGELE 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++L ++ + + LLS D N+A LE+H G+GGTE+QDWA+ML RMYTR+ + Sbjct: 59 ESLLKLDQILAAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG+LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q Sbjct: 179 EVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E K+ E N + K EI WG QIRSYV PY MVKD RTN Sbjct: 239 YGNRDRAMKMLQAKLYQMEQDKKAEEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGD+D F+ A L + Sbjct: 299 FEVAQVDKVMDGDIDGFIDAYLKWR 323 >gi|311743767|ref|ZP_07717573.1| peptide chain release factor RF2 [Aeromicrobium marinum DSM 15272] gi|311312897|gb|EFQ82808.1| peptide chain release factor RF2 [Aeromicrobium marinum DSM 15272] Length = 371 Score = 252 bits (643), Expect = 6e-65, Method: Composition-based stats. Identities = 148/353 (41%), Positives = 216/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + L + + D D + ++ L + P LW + A+ + L + + + Sbjct: 13 LDQTLTSVEKVLDLDAMRKEIAELQEQVGAPDLWDDQANAQRVTGRLSVLQAEVDKVTGL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L E+ALEE D + + + + L R+ +E + +LLSGE D DA + + Sbjct: 73 RQRLDDLELLHEMALEEGDDASVADAAAELVRVHKSIEALEVRTLLSGEYDMRDALVSIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ D+A ML RMY RWAE+ + E ++ EEAG+KS T +K P AYG L Sbjct: 133 SGAGGVDAADFALMLQRMYIRWAERHGYTVEIYDVSYAEEAGLKSTTFAVKAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF++I V PV++ + EI++ + + R+D YR+SG GGQ Sbjct: 193 VESGTHRLVRISPFDNQGRRQTSFAAIEVVPVLEQTDEIDVPDEEIRVDVYRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG VV CQ E+SQ +NKA A +L+AKL L+ + + Sbjct: 253 VNTTDSAVRLTHIPTGTVVSCQNEKSQLQNKASAMVILKAKLLALKKAEERAHLDELRGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+R+YVL PYQMVKDLRT E + VLDG++DDF++A + ++ Sbjct: 313 -VQASWGDQMRNYVLNPYQMVKDLRTEHESGNTQGVLDGEIDDFIEAGIRWRR 364 >gi|331089985|ref|ZP_08338875.1| peptide chain release factor 2 [Lachnospiraceae bacterium 3_1_46FAA] gi|330402899|gb|EGG82465.1| peptide chain release factor 2 [Lachnospiraceae bacterium 3_1_46FAA] Length = 332 Score = 252 bits (643), Expect = 6e-65, Method: Composition-based stats. Identities = 152/324 (46%), Positives = 224/324 (69%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E+P W + ++ +M+E + L +++ I+++ D ++L+E++ EED +E Sbjct: 1 MEEPGFWDDPEVSQQVMKELKGLQDSVKEIEKLYSDYEDMMLLIEMSEEEDSEETAEEIE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + LQ+ + E + +LL+G D ++A + +HAGAGGTES DW ML RMYTRWAEK+ Sbjct: 61 EELQQFEETFEELRIGTLLTGPYDRDNAIVTLHAGAGGTESCDWTGMLYRMYTRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + E L+ +G+ AG+K T +KG NAYG+L+ E+GVHRLVRISP++S +R TSF+S Sbjct: 121 YSIEELDYLEGDVAGVKGVTFEVKGENAYGYLRSEKGVHRLVRISPFNSAGKRQTSFASC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ I+IEI++ D +IDTYR+SGAGGQH+N T SAVRITH+PTG+VVQCQ ERSQ Sbjct: 181 DVIPDIEEDIDIEINDDDLKIDTYRSSGAGGQHINKTSSAVRITHLPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK +A ML++KLY ++ Q++ E + +I +G QIRSYV+QPY MVKD RTN Sbjct: 241 HMNKDKAMQMLKSKLYLMKQQEQAEKMSDIRGEVRDINFGNQIRSYVMQPYTMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E ++ V+DG++D F+ A L+ Sbjct: 301 AEVSNVGGVMDGNIDPFINAYLSA 324 >gi|317153200|ref|YP_004121248.1| peptide chain release factor 2 [Desulfovibrio aespoeensis Aspo-2] gi|316943451|gb|ADU62502.1| peptide chain release factor 2 [Desulfovibrio aespoeensis Aspo-2] Length = 391 Score = 252 bits (643), Expect = 7e-65, Method: Composition-based stats. Identities = 164/342 (47%), Positives = 215/342 (62%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 GG FD+ RL + + P W L+RE+ L + ++ + + D Sbjct: 40 FGGGFDYAETKTRLEAIEHQLSKPGAWDKPGALTPLLREKTQLSDKLAMYESLAQAKDDL 99 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LELA E D + + K + + ++ + E D +A LE+H GAGG E Sbjct: 100 DAWLELAHESRDEEAMAGLDGQISVFKERLGITELATMFAFEHDKGNAILEIHPGAGGVE 159 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 SQDWA MLLRMYTR+AE++ FK L+ GEEAGIKS TL I+G +YG LKGE GVHR Sbjct: 160 SQDWAEMLLRMYTRFAERKGFKITQLDYQVGEEAGIKSVTLQIEGLYSYGLLKGESGVHR 219 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 L+RISP+DS+ RRHTSF+S+ VYP +DD IEIE+ + D RID +R+SG GGQ VN T SA Sbjct: 220 LIRISPFDSSGRRHTSFASVDVYPDMDDDIEIEVRDEDLRIDVFRSSGPGGQSVNKTSSA 279 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+V QCQ E+SQH+NKA A +++A+LYE ELQK EE +K I WG Sbjct: 280 VRITHLPTGIVAQCQNEKSQHRNKATALRLVKARLYERELQKIEESRRQDYQAKGAIAWG 339 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIR+Y LQPY++VKD R+N E + LDGDLD ++ L Sbjct: 340 SQIRTYTLQPYRLVKDHRSNSETGNVDAFLDGDLDAMIRNHL 381 >gi|145225030|ref|YP_001135708.1| peptide chain release factor 2 [Mycobacterium gilvum PYR-GCK] gi|189040001|sp|A4TDE5|RF2_MYCGI RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|145217516|gb|ABP46920.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium gilvum PYR-GCK] Length = 372 Score = 252 bits (643), Expect = 7e-65, Method: Composition-based stats. Identities = 160/357 (44%), Positives = 221/357 (61%), Gaps = 8/357 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + + D R+ L + DP LW + A+ + + H N + ++E+ Sbjct: 12 LDTTLTTVERVVNVDGLRGRIQQLESDASDPKLWDDQARAQKVTSDLSHAQNELRRVEEL 71 Query: 63 QDRLCDNLILLELALEED---DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + RL D +L ELA EE+ E L +++ ++ + +LLSGE D +A + Sbjct: 72 RSRLDDLPVLYELAAEEEGAGSSEAFAEADAELAKLREDIAGMEVRTLLSGEYDEREALV 131 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGG ++ DWA ML+RMY RWAE+ + E + EEAGIKSAT + P AYG Sbjct: 132 NIRSGAGGVDAADWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYG 191 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+SG G Sbjct: 192 NLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 251 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL E +KR E Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLE---RKRLEERAEM 308 Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 ++ K + G WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F++A + + Sbjct: 309 DALKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWR 365 >gi|163840102|ref|YP_001624507.1| peptide chain release factor 2 [Renibacterium salmoninarum ATCC 33209] gi|229470354|sp|A9WPT6|RF2_RENSM RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|162953578|gb|ABY23093.1| peptide chain release factor 2 [Renibacterium salmoninarum ATCC 33209] Length = 374 Score = 252 bits (643), Expect = 7e-65, Method: Composition-based stats. Identities = 146/352 (41%), Positives = 219/352 (62%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + D D+ + ++ L+ + P LW N EA+ + + H + + ++ + Sbjct: 16 LRATYDSIERVIDADSLRKDIAVLSEQAGVPDLWDNPAEAQKVTSKLSHAQSKLERLETL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 R+ D +L+ELA E D L E S L ++ ++ + +LL+GE D +A + + Sbjct: 76 TARIDDLEVLVELAESEHDEDSLAEASKELVSLQKSLQELEVVTLLAGEYDEREAVVTIR 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ D+A MLLRMY RWAE+ + T L+ EEAG+KSAT +K P A+G L Sbjct: 136 SGAGGVDAADFAEMLLRMYLRWAERHGYPTSVLDTSYAEEAGLKSATFEVKAPYAFGTLS 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ + IEI ++D R+D +R+SG GGQ Sbjct: 196 VEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDSIEIPDNDIRVDVFRSSGPGGQS 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG VV Q E+SQ +N+A A +L+++L L+ Q+ + Sbjct: 256 VNTTDSAVRLTHLPTGTVVSMQNEKSQLQNRAAATRVLQSRLLLLKKQQEDAEKKALAGD 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + S VLDGD+DDF+ A + + Sbjct: 316 -VKASWGDQMRSYVLNPYQMVKDLRTEHEVGNTSGVLDGDIDDFIDAGIRWR 366 >gi|323486370|ref|ZP_08091695.1| hypothetical protein HMPREF9474_03446 [Clostridium symbiosum WAL-14163] gi|323695006|ref|ZP_08109153.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673] gi|323400352|gb|EGA92725.1| hypothetical protein HMPREF9474_03446 [Clostridium symbiosum WAL-14163] gi|323500950|gb|EGB16865.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673] Length = 335 Score = 252 bits (643), Expect = 7e-65, Method: Composition-based stats. Identities = 154/324 (47%), Positives = 224/324 (69%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E+P W + + +RE ++L + + + ++ + D I++E+ EE+D S++ E Sbjct: 1 MEEPGFWDDPERSTKTVREAKNLKDTVETYRHLEQQYEDIQIMIEMGYEENDPSMIPEIQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L +E + ++LLSGE D+ +A L+++AGAGGTE+ DW +ML RMY RWA+K+ Sbjct: 61 EMLDEFINSLEDIRTKTLLSGEYDNCNAILKLNAGAGGTEAMDWCSMLYRMYQRWADKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + TE L+ DG+EAGIKS T+ I G NA+G+LK E+GVHRLVRISP+++ +R TSF S Sbjct: 121 YTTEVLDFLDGDEAGIKSITVQINGENAFGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ ++IE+++ D RIDTYR+SGAGGQH+N T SA+RITHIPTG+VVQCQ ERSQ Sbjct: 181 DVMPDIEEDLDIEVNQDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK +A ML+AKLY L+ Q+ E + +I +G QIRSYV+QPY +VKD RTN Sbjct: 241 FQNKDKAMQMLKAKLYLLKQQENAEKLSDIRGDVKDINFGNQIRSYVMQPYTLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + + V+DGD+D F+ A L Sbjct: 301 AENGNVNAVMDGDIDLFISAYLKW 324 >gi|227505562|ref|ZP_03935611.1| peptide chain release factor 2 [Corynebacterium striatum ATCC 6940] gi|227197859|gb|EEI77907.1| peptide chain release factor 2 [Corynebacterium striatum ATCC 6940] Length = 370 Score = 252 bits (643), Expect = 7e-65, Method: Composition-based stats. Identities = 149/353 (42%), Positives = 211/353 (59%), Gaps = 4/353 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D +++ L + DP LW + A+ + I ++ Sbjct: 11 ELDSTLATIEKVMDPAALAEQVRELEAQAGDPSLWDDPAHAQQVTSALSAAQAKIRKLES 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ R+ D + + ++ D L+ + +E + ++LSGE D +A + + Sbjct: 71 LRSRVDD---MPVMFELAEEEGDTALADDELEDLGAAIEALEVTTMLSGEYDPREAVINI 127 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMYTRWAEK K + +I EEAGIKSAT ++ G YG L Sbjct: 128 RSGAGGVDAADWAEMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQL 187 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 EQG HRLVRISP+D+ RR TSF+ + V PVV+ + I++ + D R+D YR+SG GGQ Sbjct: 188 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDHIDVPDGDVRVDVYRSSGPGGQ 247 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + Q+ + + Sbjct: 248 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAELDALGA 307 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG Q+RSYVL PYQMVKDLRTN E PS VLDGDLD F++A + + Sbjct: 308 G-GNASWGNQMRSYVLHPYQMVKDLRTNYEVGDPSKVLDGDLDGFLEAGIRWR 359 >gi|76798117|ref|ZP_00780371.1| peptide chain release factor 2 [Streptococcus agalactiae 18RS21] gi|77405443|ref|ZP_00782536.1| peptide chain release factor 2 [Streptococcus agalactiae H36B] gi|77408934|ref|ZP_00785658.1| peptide chain release factor 2 [Streptococcus agalactiae COH1] gi|77411593|ref|ZP_00787935.1| peptide chain release factor 2 [Streptococcus agalactiae CJB111] gi|209559087|ref|YP_002285559.1| peptide chain release factor 2 [Streptococcus pyogenes NZ131] gi|76586525|gb|EAO63029.1| peptide chain release factor 2 [Streptococcus agalactiae 18RS21] gi|77162378|gb|EAO73347.1| peptide chain release factor 2 [Streptococcus agalactiae CJB111] gi|77172476|gb|EAO75621.1| peptide chain release factor 2 [Streptococcus agalactiae COH1] gi|77175936|gb|EAO78712.1| peptide chain release factor 2 [Streptococcus agalactiae H36B] gi|209540288|gb|ACI60864.1| Peptide chain release factor 2 [Streptococcus pyogenes NZ131] Length = 326 Score = 252 bits (643), Expect = 7e-65, Method: Composition-based stats. Identities = 148/325 (45%), Positives = 210/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L +Q+ + +LLE+ ++D S+ +E Sbjct: 1 MTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEM--LDEDDSLKEELE 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +NL ++ + + LLS D N+A LE+H G+GGTE+QDW ++LLRMYTR+ Sbjct: 59 ENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRMYTRFGNANG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q Sbjct: 179 EVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV PY MVKD RTN Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DG+++ F+ A L + Sbjct: 299 FELAQVDKVMDGEINGFIDAYLKWR 323 >gi|154496274|ref|ZP_02034970.1| hypothetical protein BACCAP_00559 [Bacteroides capillosus ATCC 29799] gi|150274357|gb|EDN01434.1| hypothetical protein BACCAP_00559 [Bacteroides capillosus ATCC 29799] Length = 373 Score = 252 bits (643), Expect = 7e-65, Method: Composition-based stats. Identities = 152/352 (43%), Positives = 227/352 (64%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L+ LG + A + L L +++ W N+ +A+ + + + L + + K+ Sbjct: 14 LKPELDELGQALGLEAAERELEMLESESASDGFWNNLEKAQKIQQRIKQLHHKVDGQKKR 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 D L L E+ EE+D S++ E + ++ +E + +L +GE D N+ L +H Sbjct: 74 LGEWEDLLTLCEMGNEEEDESLVPELEEGFNKLTANMEEARLSTLFTGEYDDNNVVLAIH 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA MLLRMYTRWAE+ F+ + ++ DG+EAGIKSAT++I+G NAYG L+ Sbjct: 134 AGAGGTEAQDWAQMLLRMYTRWAERHDFEYQVVDFQDGDEAGIKSATVMIQGENAYGHLR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR+SP+D+N+RR TSF+++ V P + + ++EI + + +R+SGAGGQH Sbjct: 194 SEHGVHRLVRVSPFDANARRQTSFAAVEVMPDLPEDADVEIRPEEYEMQVFRSSGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T SAVR+ H TG+VV CQ ERSQ +NK MLRAKL EL++Q+ E + + Sbjct: 254 INKTSSAVRLIHHATGIVVSCQTERSQFQNKDTCLRMLRAKLVELKMQQHAEKLSDIKGV 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +I WG QIRSYV PYQ+VKD R+ E ++ + V+DGD+D F+ A L + Sbjct: 314 QLKIEWGSQIRSYVFMPYQLVKDNRSGFETSNVNGVMDGDIDGFINAYLKCE 365 >gi|237802887|ref|YP_002888081.1| peptide chain release factor 2 [Chlamydia trachomatis B/Jali20/OT] gi|237804809|ref|YP_002888963.1| peptide chain release factor 2 [Chlamydia trachomatis B/TZ1A828/OT] gi|231273109|emb|CAX10022.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis B/TZ1A828/OT] gi|231274121|emb|CAX10915.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis B/Jali20/OT] Length = 368 Score = 252 bits (642), Expect = 7e-65, Method: Composition-based stats. Identities = 159/342 (46%), Positives = 210/342 (61%), Gaps = 1/342 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 D + L L + W +V+ A + L +S E+++++ Sbjct: 20 RRSLDPEGKENELKELEQQAVQDGFWDDVVRAGKISERIARLKQQLSEFNELKNKVSAIQ 79 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LE D + +E + ++ + LLSGE D N +L ++AGAGGTES Sbjct: 80 FFLEDEESSKDLEMQKELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTES 139 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DW MLLRMY RWA ++ E ++ DGE AGIK TL + G AYG+ K E GVHRL Sbjct: 140 CDWVEMLLRMYMRWASSHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRL 199 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+DSN++RHTSF+S+ V+P +DD IE+EI D RIDTYR+SGAGGQHVN TDSAV Sbjct: 200 VRISPFDSNAKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAV 259 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PTG+VV CQ ERSQ +N+ NMLRA++Y+ LQ+R E NI +K EI WG Sbjct: 260 RITHFPTGIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGS 319 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351 QIR+YV QPY +VKD+RT E + ++DG+ LD F+KA L Sbjct: 320 QIRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYL 361 >gi|170782441|ref|YP_001710774.1| chain release factor 2 [Clavibacter michiganensis subsp. sepedonicus] gi|169157010|emb|CAQ02182.1| chain release factor 2 [Clavibacter michiganensis subsp. sepedonicus] Length = 367 Score = 252 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 146/354 (41%), Positives = 218/354 (61%), Gaps = 3/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + + + Q + L+ + +P LW + +A+ + + H + + I E Sbjct: 12 ELRDTYSNIRSVIGVERLQQEVEELSAQAGEPDLWDDTEKAQKVTSDLSHRQSELKRIDE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +Q RL D +L+E+A DD +E L I ++ + ++LL+GE D A + + Sbjct: 72 LQRRLDDLDVLVEMAK--DDEESAEEAVVELAGITKIMDELEVQTLLNGEFDPRPAVVTI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG ++ D+A ML+RMY RWAE+ + L+ EEAGIKSAT I P A+G L Sbjct: 130 RAGAGGVDAADFAEMLMRMYLRWAEQHDYSATVLDTSYAEEAGIKSATFEIDAPYAFGTL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVR+SP++S +R TSF+++ V P+++ + IEI E+D R+D +R+SG GGQ Sbjct: 190 SVEAGTHRLVRMSPFNSAGKRQTSFAAVEVVPLIEQTESIEIPENDMRVDVFRSSGPGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PTG+VV CQ E+SQ +N+A A +L+++L ++ ++ Sbjct: 250 SVNTTDSAVRITHLPTGIVVTCQNEKSQIQNRAAALRVLQSRLLLVQREQEAATKKELAG 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + T WG Q+RSYVL PYQMVKDLRT E +PS+V DGDLD F+ A + +K Sbjct: 310 NIT-ASWGDQMRSYVLAPYQMVKDLRTEHEVNNPSNVFDGDLDGFISAGIRWRK 362 >gi|269218746|ref|ZP_06162600.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 848 str. F0332] gi|269211857|gb|EEZ78197.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 848 str. F0332] Length = 378 Score = 252 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 137/358 (38%), Positives = 208/358 (58%), Gaps = 7/358 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + +R++ L + P LW + +A+ + + H + I + Sbjct: 12 LRKTFQQISSVSNPEGLRERIAELTEASAAPDLWDDQDKAQSVTSKLSHAQAELDKINAM 71 Query: 63 QDRLCDNLILLELALEEDDCSI------LQETSDNLQRIKLEVEYKQFESLLSGEADSND 116 L D L E+A EE + L ++ ++ + +LLSG+ D + Sbjct: 72 SAALDDLETLKEMADEEAGSDPETAAELYSDLERELGQVGADMSELEIRTLLSGKYDERE 131 Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 A + + +GAGG ++ D+A +L RMY RWAE+R + + L+ EEAGIKS T + P Sbjct: 132 AVVTIRSGAGGVDAADFAQILQRMYLRWAERRGYSAKVLDTSYAEEAGIKSTTFEVSAPY 191 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 AYG L E G HRLVRISP+D+ RR TSF+++ V P+++ + I++ E+D R+D +R+S Sbjct: 192 AYGTLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDHIDVPEADIRVDVFRSS 251 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQ VNTTDSAVRITHIPTG+VV Q E+SQ +N+A A +L+++L L+ ++ Sbjct: 252 GPGGQSVNTTDSAVRITHIPTGIVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQEEEAREK 311 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVLQPYQMVKDLRT E +P V DGD+D F+ A + + Sbjct: 312 KELAGD-IKASWGDQMRSYVLQPYQMVKDLRTGYEAGNPEAVFDGDIDGFIDAGIRWR 368 >gi|229815728|ref|ZP_04446053.1| hypothetical protein COLINT_02777 [Collinsella intestinalis DSM 13280] gi|229808644|gb|EEP44421.1| hypothetical protein COLINT_02777 [Collinsella intestinalis DSM 13280] Length = 377 Score = 252 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 149/355 (41%), Positives = 204/355 (57%), Gaps = 4/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L + D A R+ L + P W + A+ M E + ++ + Sbjct: 17 LEARLTEVEAYLHIDEARGRVGELEQASAAPGFWDDADAARAHMAELAQVKGDVALVDGA 76 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYL 119 ++RL D LELA E + + ++ + + S +GE D A L Sbjct: 77 RERLSDARAALELAEEMGEEGGAEFVAEATEAAAELTHSIDEMELSSWFTGEFDHGSAIL 136 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + G GG E+QDW ML +MY ++ +R +K + E GI AT+ ++G +A+G Sbjct: 137 SIKPGQGGLEAQDWTFMLFKMYMKYCARRGWKVTVNDCPAAEVIGIDRATITVEGKDAFG 196 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L+ E GVHRLVRISP D+ RR T+F+ + V PV+ D I+IE++ D R+D Y ASG G Sbjct: 197 MLRAEAGVHRLVRISPTDAKKRRQTTFAGVEVIPVLPDDIQIEVAPDDIRVDVYHASGPG 256 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA +L+A+LYELELQKRE+ + Sbjct: 257 GQGVNTTDSAVRVTHIPTGIVVTCQNERSQIQNKAACMQILKARLYELELQKREDTLDEI 316 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAI 353 KTEIG+G QIRSYVL PYQMVKDLR +E ++ VL DGDLD F+ Sbjct: 317 RGPKTEIGFGNQIRSYVLYPYQMVKDLRCGVETSNVDGVLEDGDLDPFIIGYHRW 371 >gi|319957316|ref|YP_004168579.1| bacterial peptide chain release factor 2 (brf-2) [Nitratifractor salsuginis DSM 16511] gi|319419720|gb|ADV46830.1| bacterial peptide chain release factor 2 (bRF-2) [Nitratifractor salsuginis DSM 16511] Length = 372 Score = 252 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 170/352 (48%), Positives = 234/352 (66%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS ++ + + + +RL + ++P W + A + +E+ L+ ++ E Sbjct: 13 LSTKMENITNIVKPEEIRKRLDEIEEMQQNPEFWTDSDRAAKISQEKTRLERTLAKYDEA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D ELA E D L+ D + +K ++ + +LSGE DS +A + +H Sbjct: 73 KAALEDAQEYFELAKSEGDEETLEMLYDEAENLKEHIQQLEVAIMLSGEHDSANAIVTIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+ML RMY RWAE+ FK E L+ GEEAGIK + +IKG NAYG+LK Sbjct: 133 PGAGGTESQDWASMLYRMYLRWAERHGFKVEVLDYQPGEEAGIKDVSFIIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVRISP+D+N++RHTSF+S+ V P ++D I+IEI + D RIDTYRASGAGGQH Sbjct: 193 VENGIHRLVRISPFDANAKRHTSFTSVMVSPEINDDIDIEIEDKDIRIDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SA+RITHIPTG+VVQCQ +RSQHKNKA A ML+++LYE E+ K++ + E Sbjct: 253 VNKTESAIRITHIPTGIVVQCQNDRSQHKNKAAAMKMLKSRLYEYEMAKKQAEIDGIE-- 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K++IGWG QIRSYVLQPYQ VKD R+ T+ +LDGD+D ++ L + Sbjct: 311 KSDIGWGHQIRSYVLQPYQQVKDTRSGQAFTNVEAILDGDIDKLLEGVLIAQ 362 >gi|15896100|ref|NP_349449.1| peptide chain release factor 2 [Clostridium acetobutylicum ATCC 824] gi|15025890|gb|AAK80789.1|AE007782_3 Protein chain release factor B [Clostridium acetobutylicum ATCC 824] gi|325510254|gb|ADZ21890.1| peptide chain release factor 2 [Clostridium acetobutylicum EA 2018] Length = 329 Score = 252 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 153/325 (47%), Positives = 217/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++P W +V A+ + E + L I I+ R+ D+ +L+E+ E+++ E Sbjct: 1 MQEPDFWNDVKRAQEISMEIKFLKGRIDRFNSIESRIEDDNVLIEMCREDENEEEADEIL 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + EV+ + E +LSGE D N+A L +H G GGT++QDW MLLRMYTRWAE + Sbjct: 61 KEVRDLHEEVDNFKIEIILSGEYDRNNAILNLHTGVGGTDAQDWTQMLLRMYTRWAEAKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK + +++ G+EAGIKS ++ I G AYG+LK E+G+HRLVRISP+++N +R TSF+S+ Sbjct: 121 FKVDIIDMLPGDEAGIKSVSINIDGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + S +I I D ++DTYRASGAGGQHVN T+SAVRITH+PTG+VVQCQ ERSQ Sbjct: 181 EVLPQLTQSQDIVIRPEDLKVDTYRASGAGGQHVNKTESAVRITHLPTGIVVQCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK A NML++KL EL+ + +E ++GWG QIRSYV QPY MVKD RT Sbjct: 241 HSNKETAMNMLKSKLVELKERMHKEKVEDLAGELKDMGWGNQIRSYVFQPYTMVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E ++ V+DG++D F+ L + Sbjct: 301 VETSNVDAVMDGEIDKFIIEYLNKE 325 >gi|68535523|ref|YP_250228.1| peptide chain release factor 2 [Corynebacterium jeikeium K411] gi|260579727|ref|ZP_05847586.1| peptide chain release factor 2 [Corynebacterium jeikeium ATCC 43734] gi|68263122|emb|CAI36610.1| peptide chain release factor RF-2 [Corynebacterium jeikeium K411] gi|258602157|gb|EEW15475.1| peptide chain release factor 2 [Corynebacterium jeikeium ATCC 43734] Length = 377 Score = 252 bits (642), Expect = 8e-65, Method: Composition-based stats. Identities = 160/358 (44%), Positives = 220/358 (61%), Gaps = 7/358 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D R L K+ DP LW + A+ + E + + + +K + Sbjct: 12 LDGTLTTIEKVLDLDELGDRARELEEKSADPSLWDDPDHAQQVTSELSRVQSKLKKVKGL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETS------DNLQRIKLEVEYKQFESLLSGEADSND 116 + RL D +L ++A EE + ++ E+E + ++LSGE D + Sbjct: 72 RQRLDDLPVLYDMAEEEAGDDPDAAQEAVQLADTEREELRQEIESLEVTTMLSGEYDERE 131 Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 A L + + AGG ++ DWA MLLRMYTRWAEK K E +I EEAGIKSAT++I G Sbjct: 132 AVLNIRSAAGGVDAADWAEMLLRMYTRWAEKAGHKVEVYDISYAEEAGIKSATIVIHGEY 191 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 YG L EQG HRLVRISP+D+ RR TSF+ + V PVV+ + I+I E+D R+D YR+S Sbjct: 192 MYGTLSVEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDHIDIDENDVRVDVYRSS 251 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQ VNTTDSAVR+TH+PTG+VV CQ E+SQ +NKA A +L+AKL E + Q+ + Sbjct: 252 GPGGQSVNTTDSAVRLTHVPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEEQAEM 311 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + + + WG Q+R+YVL PYQMVKDLRTN+E PS VLDGDLD F++A + + Sbjct: 312 DALKGDGSN-SWGNQMRNYVLHPYQMVKDLRTNVEVNDPSKVLDGDLDGFLEAGIRWR 368 >gi|307718929|ref|YP_003874461.1| peptide chain release factor 2 [Spirochaeta thermophila DSM 6192] gi|306532654|gb|ADN02188.1| peptide chain release factor 2 [Spirochaeta thermophila DSM 6192] Length = 361 Score = 252 bits (642), Expect = 9e-65, Method: Composition-based stats. Identities = 168/352 (47%), Positives = 231/352 (65%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + R+ GG+F+ + +++S L +T P LW + A+ ++ + L + Sbjct: 1 MRRKSKKPGGIFENSSIKEQISRLEEETGRPDLWNDRKHAEEVLSRLRRLKVRYEGWASL 60 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L +LA EE+D S +E L + + + LL+ E D DAYL +H Sbjct: 61 VQEVEDIHTLYDLAAEENDPSQEEELRQQLAEAERKFRELRLRELLNEEYDQKDAYLTIH 120 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG E+ DWA+MLLRMY RW E++ F T+ +++ + +E GIKS T+ +KG A+G+LK Sbjct: 121 AGAGGMEACDWASMLLRMYLRWLERKGFSTQIVDMVE-DEGGIKSVTVEVKGDYAFGYLK 179 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVRISP+D++ RRHTSF+S++V P+++D IE++I D RIDTYR+ GAGGQH Sbjct: 180 GEAGVHRLVRISPFDASGRRHTSFASVYVSPIIEDDIEVDIRPEDLRIDTYRSQGAGGQH 239 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH+PTG+VVQCQ ERSQHKN+ A MLR++LYE Q REE Sbjct: 240 VNKTESAVRITHLPTGIVVQCQNERSQHKNREIAMRMLRSRLYEYYQQLREEEQEKKAIE 299 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K +I WG QIRSYV QPY MVKDLRT +E + V+DGDLD F++A L + Sbjct: 300 KKDISWGNQIRSYVFQPYTMVKDLRTRVETGNIQAVMDGDLDMFIEAYLLQQ 351 >gi|330991179|ref|ZP_08315132.1| Peptide chain release factor 2 [Gluconacetobacter sp. SXCC-1] gi|329761765|gb|EGG78256.1| Peptide chain release factor 2 [Gluconacetobacter sp. SXCC-1] Length = 333 Score = 252 bits (642), Expect = 9e-65, Method: Composition-based stats. Identities = 196/312 (62%), Positives = 247/312 (79%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W + A+ LMRER L N I ++ ++ + D L L+ELA E D +++ E L+ + Sbjct: 2 WNDAEAAQKLMRERTLLANQIEGVQRLEADVNDTLELVELAEMEGDSAVVAEAVAGLRAL 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 E + ++ ESLLSGEAD ND YLEV+AGAGGTE+QDWA MLLRMYTRWAE+ +K + Sbjct: 62 AEEAKRRETESLLSGEADGNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTMM 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E +GE+AGIKSAT+ + GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPVV Sbjct: 122 ESSEGEQAGIKSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVV 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DDSIEIEI+E+D R+DT+RASGAGGQHVN T+SA+RITHIPTG+VV CQ +RSQH+N+A Sbjct: 182 DDSIEIEINEADLRVDTFRASGAGGQHVNKTESAIRITHIPTGIVVACQTDRSQHRNRAT 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A ML+A++YE ELQKRE A E++KT+IGWG QIRSYVL PYQ+VKDLRTN+EKT+P Sbjct: 242 AMTMLKARMYEQELQKREAAAAQTEANKTDIGWGHQIRSYVLAPYQLVKDLRTNVEKTNP 301 Query: 336 SDVLDGDLDDFM 347 +LDGD+DDFM Sbjct: 302 DAILDGDIDDFM 313 >gi|322435983|ref|YP_004218195.1| Peptide chain release factor 2 [Acidobacterium sp. MP5ACTX9] gi|321163710|gb|ADW69415.1| Peptide chain release factor 2 [Acidobacterium sp. MP5ACTX9] Length = 375 Score = 252 bits (642), Expect = 9e-65, Method: Composition-based stats. Identities = 175/353 (49%), Positives = 231/353 (65%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + ++ L D + L+ + K DP +W + ++ LMR+R+ L+ ++ E+ Sbjct: 12 VRDKVRELREYLDSSRLRRELAIVEEKIADPTVWADAARSQPLMRDRKRLETLLADDAEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 R D ELA E +D + + + + +++LSGE D +A + VH Sbjct: 72 ARRSDDIEAYFELAKEGEDTEPD--LVREIPALVEYADQLESKTMLSGETDLLNAIVTVH 129 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA ML+RMY RW E+++FK E EI DG+EAGIKSAT I G A+G L Sbjct: 130 PGAGGTESQDWAEMLMRMYIRWGERQRFKVEINEIQDGDEAGIKSATFTISGEFAFGLLS 189 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVRISP+DS RRHTSF+S++V P +DD+I I+I D RIDTYR+ G GGQH Sbjct: 190 GETGVHRLVRISPFDSAKRRHTSFASVFVSPEIDDTIVIDIKVEDLRIDTYRSGGKGGQH 249 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+V CQ ERSQHKNK +A M+R+KLYE EL K++ E S Sbjct: 250 VNTTDSAVRITHLPTGLVTGCQNERSQHKNKERAMKMMRSKLYEYELDKKKAATRKIEDS 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K EIG+G QIRSYVLQPY+M KDLRT +E VLDGDL+ F++ L +++ Sbjct: 310 KLEIGFGSQIRSYVLQPYRMAKDLRTRVEVGDVDKVLDGDLEPFIRGFLRMRR 362 >gi|297243831|ref|ZP_06927761.1| protein chain release factor B [Gardnerella vaginalis AMD] gi|296888252|gb|EFH26994.1| protein chain release factor B [Gardnerella vaginalis AMD] Length = 378 Score = 252 bits (642), Expect = 9e-65, Method: Composition-based stats. Identities = 141/352 (40%), Positives = 213/352 (60%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + + + D D+ ++ L + +P LW + A+ + + + + ++ + Sbjct: 13 VEAKYSLISKALDVDSLKATIADLEKQAAEPGLWDDSEHAQQVTSKLSAAQSQLKRLQAV 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D L+EL EE D + E + L I E++ + ++LL GE D+ A + + Sbjct: 73 EQRIEDTKTLIELGEEEGDADSMNEAQEELGNIAHELDDMEVQTLLDGEYDARSAVVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ D+A MLLRMY RWAE+ +KT+ ++ EEAGIKSAT + P AYG L Sbjct: 133 SGAGGVDAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HR+VRISP+D+ RR T FS++ V P+V+ + I+I +SD R+DT++ASG GGQ Sbjct: 193 VEGGTHRMVRISPFDNQGRRQTGFSAVEVIPLVEATDHIDIPDSDIRVDTFQASGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT SAVRITH+PTG+VV Q ERSQ +N+A A +L+++L L+ + Sbjct: 253 VNTTYSAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLKHAEEAAKKKELAGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD+D F++A + + Sbjct: 313 -IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWR 363 >gi|294790676|ref|ZP_06755834.1| peptide chain release factor 2 [Scardovia inopinata F0304] gi|294458573|gb|EFG26926.1| peptide chain release factor 2 [Scardovia inopinata F0304] Length = 370 Score = 252 bits (642), Expect = 9e-65, Method: Composition-based stats. Identities = 143/353 (40%), Positives = 209/353 (59%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + N +++ L + P LW + A+++ N + + Sbjct: 12 EARSKFETISSALGRQNLAEKIVSLEKEASAPGLWDDQENAQLVTSRLSQTQNEAKRLDD 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D L EL EEDD E L ++ ++ + ++LL GE D+ A + + Sbjct: 72 LERRLDDIATLYELGSEEDDQDSKAEAEKELTAVRSDLSDLEIQTLLDGEYDNRAAVVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMY RWAE+ +K + ++ EEAGIKSAT + P AYG L Sbjct: 132 RSGAGGVDAADWAQMLMRMYLRWAERHHYKVQIMDTSYAEEAGIKSATFEVDAPYAYGKL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+NSRR TSF+++ V P+V+ + I+I +SD R+DTY + G GGQ Sbjct: 192 SVEGGTHRLVRISPFDNNSRRQTSFAAVEVIPLVEPTDHIDIPDSDIRVDTYMSHGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTT SAVRITHIPTG+VV Q ERSQ +N+A A ++L+++L ++ ++ Sbjct: 252 GVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMSVLQSRLLVMKQEEEAAKKKELAG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + P V DGD+D F+ A + + Sbjct: 312 D-VKASWGDQMRSYVLHPYQMVKDLRTGYETSDPQKVFDGDIDAFIDAGIRWR 363 >gi|78185691|ref|YP_378125.1| peptide chain release factor 2 [Synechococcus sp. CC9902] gi|78169985|gb|ABB27082.1| bacterial peptide chain release factor 2 (bRF-2) [Synechococcus sp. CC9902] Length = 356 Score = 252 bits (642), Expect = 9e-65, Method: Composition-based stats. Identities = 145/343 (42%), Positives = 203/343 (59%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD R L P W + A+ MR + + + + + + D Sbjct: 3 RTVFDVPALNARQQDLEQLAAQPDFWNDQQNAQKQMRRLDEVKAQLQQLADWRSAIDDAK 62 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LEL E D +L E L ++ ++ + E LLSGE D A L ++AGAGGT++ Sbjct: 63 ATLELYELEADEEMLGEAQQGLTELRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDA 122 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRWAE + EI +GEEAGIKSAT+ ++G AYG+L+ E+G HRL Sbjct: 123 QDWAQMLLRMYTRWAEDHDMRVTIDEISEGEEAGIKSATIEVEGRYAYGYLRNEKGTHRL 182 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+++N +R TSF+ I V P +++ ++I+I + D + T R+ GAGGQ+VN ++AV Sbjct: 183 VRISPFNANDKRQTSFAGIEVMPKLEEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RI H+PTG+ V+C QERSQ +NK +A +L+AKL + ++R E WG Sbjct: 243 RIQHLPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIR+YV PYQMVKDLRT E V+DG LD F+ A+L Sbjct: 303 QIRNYVFHPYQMVKDLRTQEETNDVQAVMDGALDPFIDASLRQ 345 >gi|291278533|ref|YP_003495368.1| peptide chain release factor RF-1 [Deferribacter desulfuricans SSM1] gi|290753235|dbj|BAI79612.1| peptide chain release factor RF-1 [Deferribacter desulfuricans SSM1] Length = 355 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 129/350 (36%), Positives = 194/350 (55%), Gaps = 11/350 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F + +++ + L K DP++ + + + +E L + +E + D Sbjct: 1 MFHKLEEVLEKYNILTEKLSDPNIMSDNKTYQQIAKEHAELKPIVEKYQEYKKINEDIEE 60 Query: 72 LLELALEEDDCSIL---QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 ++ D E + ++++ + + D + YLE+ AG GG Sbjct: 61 AKQILESGDKELKELAEMELEEGKEKLEKIENELKLLLVPKDPYDEKNIYLEIRAGTGGD 120 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A LLRMY R+AEK ++KTE ++ +D G K LLIKG AY LK E G H Sbjct: 121 EATLFAADLLRMYMRYAEKHRWKTEIVDYNDTGVGGYKEVVLLIKGKGAYSRLKFEGGGH 180 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ RI +S R HTS ++ V P D +E+EI SD RID +RASGAGGQHVNTTDS Sbjct: 181 RVQRIPVTESGGRIHTSACTVAVLP-EADDVEVEIDPSDLRIDVFRASGAGGQHVNTTDS 239 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITHIPTG+VV CQ ERSQ KNK +A +L+AK+ E+E++K++E I + K ++G Sbjct: 240 AVRITHIPTGIVVSCQDERSQIKNKEKAMKLLKAKILEMEIRKQQE--AIASNRKLQVGS 297 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R N+ + V++G+LD+ + A +A + Sbjct: 298 GDRSERIRTYNF-PQNRVTDHRINLTLYNLDQVMEGELDEIIDALIAYDQ 346 >gi|322411427|gb|EFY02335.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 327 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 147/325 (45%), Positives = 200/325 (61%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 + W + I A+ ++ L + +Q+ + + LE+ E+D E S Sbjct: 1 MTESDFWNDNIAAQKTSQKLNELKSTYETFHNMQELSDETELYLEMLEEDDSVKDDLEAS 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L LS D N+A LE+H G+GGTE+QDWA+ML RMYTR+ + Sbjct: 61 LETLGQILASYEMTLL--LSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG+LK E GVHRLVRISP+DS RRHTSF S+ Sbjct: 119 FKVETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFVSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q Sbjct: 179 EVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY+LE +K+ N + K EI WG QIRSYV PY MVKD RTN Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAAEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGD++ F+ A L + Sbjct: 299 YEVAQVDKVMDGDIEGFIDAYLKWR 323 >gi|148272488|ref|YP_001222049.1| peptide chain release factor RF-2 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830418|emb|CAN01353.1| peptide chain release factor RF-2 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 367 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 145/354 (40%), Positives = 218/354 (61%), Gaps = 3/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + + + Q + L+ + +P LW + +A+ + + H + + I E Sbjct: 12 ELRDTYSNIRSVIGVERLQQEVEELSAQAGEPDLWDDTEKAQKVTSDLSHRQSELKRIDE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +Q RL D +L+E+A DD +E L I ++ + ++LL+GE D A + + Sbjct: 72 LQRRLDDLDVLVEMAK--DDEESAEEAVVELAGITKIMDELEVQTLLNGEFDPRPAVVTI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG ++ D+A ML+RMY RWAE+ + L+ EEAGIKSAT I P A+G L Sbjct: 130 RAGAGGVDAADFAEMLMRMYLRWAEQHDYSATVLDTSYAEEAGIKSATFEIDAPYAFGTL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVR+SP++S +R TSF+++ V P+++ + IEI E++ R+D +R+SG GGQ Sbjct: 190 SVEAGTHRLVRMSPFNSAGKRQTSFAAVEVVPLIEQTESIEIPENEMRVDVFRSSGPGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PTG+VV CQ E+SQ +N+A A +L+++L ++ ++ Sbjct: 250 SVNTTDSAVRITHLPTGIVVTCQNEKSQIQNRAAALRVLQSRLLLVQREQEAATKKELAG 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + T WG Q+RSYVL PYQMVKDLRT E +PS+V DGDLD F+ A + +K Sbjct: 310 NIT-ASWGDQMRSYVLAPYQMVKDLRTEHEVNNPSNVFDGDLDGFISAGIRWRK 362 >gi|193215043|ref|YP_001996242.1| hypothetical protein Ctha_1332 [Chloroherpeton thalassium ATCC 35110] gi|193088520|gb|ACF13795.1| hypothetical protein Ctha_1332 [Chloroherpeton thalassium ATCC 35110] Length = 366 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 158/350 (45%), Positives = 224/350 (64%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +S +L+ L G D D + ++ L KT W N A+ +++E ++ Sbjct: 12 ISERLSLLRGFLDIDARLNAIAELEKKTAAEGFWSNQESAQKVLKEISGHREWTEDFLDL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L LE+A E +D S L E N+ ++ V +F ++LSG D +A L +H Sbjct: 72 EKTLQGEEESLEIAEELEDESYLAEAEKNIDKLDRAVHALEFRNMLSGADDKRNALLTIH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+QDWA+ML RMY RWAE+R FK + +G+ AGIK+ATL I+G AYG+LK Sbjct: 132 AGAGGTEAQDWADMLYRMYMRWAERRGFKVFTDDYQEGDGAGIKTATLEIQGDYAYGYLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR+SP+D+N+RRHTSF+S++ YP D +EIEI + D +DT+R+ G GGQ+ Sbjct: 192 AENGVHRLVRVSPFDANARRHTSFASVYAYPEAPDDVEIEIRKEDLEMDTFRSGGKGGQN 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++AVRI H+P+G+VV CQQERSQ +N+ +A MLR++LY+L+ ++ E E Sbjct: 252 VNKVETAVRIKHVPSGIVVACQQERSQFQNRERAMKMLRSRLYQLKREEEEAAKLALEGK 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K +I WG QIRSYVL + +KD RTN E + VLDGD+D F++ LA Sbjct: 312 KKKIEWGSQIRSYVLDD-RRIKDHRTNHESFNVEAVLDGDIDQFIERYLA 360 >gi|329116145|ref|ZP_08244862.1| peptide chain release factor 2 [Streptococcus parauberis NCFD 2020] gi|326906550|gb|EGE53464.1| peptide chain release factor 2 [Streptococcus parauberis NCFD 2020] Length = 327 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 149/325 (45%), Positives = 202/325 (62%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L ++Q+ + + LE+ E+D E S Sbjct: 1 MSEPDFWNDNIAAQKTSQELNELKVKFDTYHDMQNLSEETELYLEMLDEDDSLQEELEAS 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L LS D N+A LE+H G+GGTE+QDWA+ML RMYTR+ + Sbjct: 61 LEKLDQILSSYEMTLL--LSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG+LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q Sbjct: 179 EVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY+LE +K+ E N + K EI WG QIRSYV PY MVKD RT+ Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTS 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DG +D F+ A L + Sbjct: 299 FEVAQVDKVMDGFIDGFIDAYLKWR 323 >gi|157164977|ref|YP_001467027.1| peptide chain release factor 2 [Campylobacter concisus 13826] gi|166223623|sp|A7ZE19|RF2_CAMC1 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|112800036|gb|EAT97380.1| peptide chain release factor 2 [Campylobacter concisus 13826] Length = 366 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 171/354 (48%), Positives = 232/354 (65%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL ++ +G + D+ RL + +DP WQ++ A L +E+ + N ++ + Sbjct: 12 KLQTKVENIGSIVKPDDIKARLKEIEAIEQDPDFWQDIARAGALNKEKTKISNMLAKFSD 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D L ELA E+D + ++ + + ++ + LLSGE D +A + + Sbjct: 72 ANQAVSDAKELFELANSENDEETINSLFEDAKNLDEKIVNLEISMLLSGEDDGKNAIVSI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTES DWA+ML RMY R+ E+ FK E L+ +GEEAG+K + ++KG NAYG+ Sbjct: 132 HPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFIVKGENAYGYF 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HRLVR SP+DS RRHTSFSS+ V P VDD IEIEI E D +IDTYRASGAGGQ Sbjct: 192 KAENGIHRLVRTSPFDSAGRRHTSFSSVMVSPEVDDDIEIEIEEKDLKIDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SA+RITHIPTG+VVQCQ +RSQHKN+A A ML+++LYELEL K++E +N E Sbjct: 252 HVNKTESAIRITHIPTGIVVQCQNDRSQHKNRATAMKMLKSRLYELELMKQQEASNSVE- 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+ + +LDGD+ ++ L +K Sbjct: 311 -KSEIGWGHQIRSYVLFPYQQVKDNRSGEAYSQTDAILDGDIKKMIEGVLIAQK 363 >gi|297848140|ref|XP_002891951.1| hypothetical protein ARALYDRAFT_474798 [Arabidopsis lyrata subsp. lyrata] gi|297337793|gb|EFH68210.1| hypothetical protein ARALYDRAFT_474798 [Arabidopsis lyrata subsp. lyrata] Length = 470 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 159/351 (45%), Positives = 225/351 (64%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +S+ + + W + RL L+ + P LW + I A + RE L + + Sbjct: 110 ISQSIQVIKRRLQWKKLLVRLKVLSAELNKPDLWNDPIHAGKISREHGSLTGKMKGVMTF 169 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L +++ +L+LA EE+D + ET + ++ + K+ E+LLS E D Y+EV Sbjct: 170 ERELLEHIDMLKLAKEENDTELESETLKAMMDMRRVSKEKELEALLSAENDPCSCYIEVQ 229 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+M++ MY WA++RKF ++ GE AGIK AT+ + G +YG+ K Sbjct: 230 AGAGGTESNDWASMVMEMYKTWAQRRKFSVTVVDEAAGEIAGIKRATIKVNGEYSYGYAK 289 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVRISP+DS RRHTSF+++ V P+ D S ++I++SD RI+ +R+ GAGGQ Sbjct: 290 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGSTRVQINDSDLRIERFRSGGAGGQ 349 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H NTTDSAVRI HIPTG+ CQ ERSQH NKA A +L+++L +LE+ ++ + Sbjct: 350 HANTTDSAVRIIHIPTGITATCQNERSQHMNKASAMAVLQSRLDQLEMARQTAMNAQHTQ 409 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 S TEI WG QIR+YVL PY+MVKDLRTN E + P VL+GDLD F+ + L+ Sbjct: 410 SLTEISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSFLS 460 >gi|77413702|ref|ZP_00789885.1| peptide chain release factor 2 [Streptococcus agalactiae 515] gi|77160247|gb|EAO71375.1| peptide chain release factor 2 [Streptococcus agalactiae 515] Length = 326 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 148/325 (45%), Positives = 210/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L +Q+ + +LLE+ ++D S+ +E Sbjct: 1 MTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEM--LDEDDSLKEELE 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +NL ++ + + LLS D N+A LE+H G+GGTE+QDW ++LLRMYTR+ Sbjct: 59 ENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRMYTRFGNANG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q Sbjct: 179 EVMPELDDTIEVEVRDYDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV PY MVKD RTN Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DG+++ F+ A L + Sbjct: 299 FELAQVDKVMDGEINGFIDAYLKWR 323 >gi|152971837|ref|YP_001336946.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238896431|ref|YP_002921169.1| peptide chain release factor 2 [Klebsiella pneumoniae NTUH-K2044] gi|262042532|ref|ZP_06015689.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330010996|ref|ZP_08306940.1| peptide chain release factor 2 [Klebsiella sp. MS 92-3] gi|150956686|gb|ABR78716.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238548751|dbj|BAH65102.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259040092|gb|EEW41206.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328534333|gb|EGF60944.1| peptide chain release factor 2 [Klebsiella sp. MS 92-3] Length = 320 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 173/318 (54%), Positives = 220/318 (69%), Gaps = 1/318 (0%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W A+ L +ER L+ + + ++ L D LL+LA+E DD E L + Sbjct: 2 WNEPERAQALGKERSSLEAIVDTLDQMSQGLEDVAGLLDLAVEADDEETFNEAVAELDTL 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + ++ +F + SGE DS D YL++ AG+GGTE+QDWA+ML+RMY RWAE R FKTE + Sbjct: 62 EEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLMRMYLRWAEARGFKTEII 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E +GE AGIKS T+ I G AYGWL+ E GVHRLVR SP+DS RRHTSFSS +VYP V Sbjct: 122 EESEGEVAGIKSVTIKIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEV 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 +D I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPTG+V QCQ +RSQHKNK Q Sbjct: 182 EDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGLVTQCQNDRSQHKNKDQ 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A ++AKLYELE+QK+ E +K++IGWG QIRSYVL +KDLRT +E + Sbjct: 242 AMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNT 300 Query: 336 SDVLDGDLDDFMKATLAI 353 VLDG LD F++A+L Sbjct: 301 QAVLDGSLDQFIEASLKA 318 >gi|126657098|ref|ZP_01728269.1| peptide chain release factor 2 [Cyanothece sp. CCY0110] gi|126621641|gb|EAZ92351.1| peptide chain release factor 2 [Cyanothece sp. CCY0110] Length = 358 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 142/345 (41%), Positives = 217/345 (62%), Gaps = 1/345 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD + L P W A+ +++ L + + ++ ++L D Sbjct: 9 RTIFDLPALKANIKNLENTAAQPQFWDEPETAQKTLQKLNDLKSQLEQYQQWCEQLEDTE 68 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + EL EDD ++ +E +N+ ++ ++ + + LLSG D+ A L ++AGAGGT++ Sbjct: 69 AIAELLELEDDTTLRREAQENITQLNHNLDRWELQQLLSGIYDTKGAVLTINAGAGGTDA 128 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRW E++ +K E+ +G+EAGIKSATL I+G A+G+LKGE+G HRL Sbjct: 129 QDWAQMLLRMYTRWGEQQGYKVNLTELSEGDEAGIKSATLEIEGCYAFGYLKGEKGTHRL 188 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSI-EIEISESDCRIDTYRASGAGGQHVNTTDSA 249 VRISP+++N +R TSF+ + V P++++ +++I + D I T R+ G GGQ+VN ++A Sbjct: 189 VRISPFNANGKRQTSFAGVEVMPMLEEDDLKVDIPDKDLDISTSRSGGKGGQNVNKVETA 248 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRI H+PTG+ V+C QERSQ +NK +A +L+AKL + ++R + E WG Sbjct: 249 VRIVHVPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQEIAEIRGDMVEAAWG 308 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QIR+YV PYQMVKDLRTN+E T + V+DG+LD F++A L Sbjct: 309 NQIRNYVFHPYQMVKDLRTNVETTDVTGVMDGNLDSFIEAYLRYD 353 >gi|318040666|ref|ZP_07972622.1| peptide chain release factor 2 [Synechococcus sp. CB0101] Length = 356 Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats. Identities = 143/341 (41%), Positives = 210/341 (61%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD R L P W + +A+ MR+ + + + + Q + D Sbjct: 3 RTVFDVPALKARQQDLEQLASQPDFWDDQKQAQAKMRQLDEVKAQLEQLSQWQGAVADAE 62 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +E+ E D +L E+++ LQ+++ +++ + E LLSG D A + ++AGAGGT++ Sbjct: 63 ATVEIYGLEPDEELLSESNEALQKLRSDLDRWELERLLSGPYDKEGAVISINAGAGGTDA 122 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA ML+RMYTRWAE K E+ +GEEAGIKS T+ I+G AYG+L+ E+G HRL Sbjct: 123 QDWALMLMRMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRL 182 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+++N +R TSF+ + V P +++ ++++I + D I T R+ GAGGQ+VN ++AV Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKIEEEVKLDIPDKDLEITTSRSGGAGGQNVNKVETAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RI HIPTG+ V+C QERSQ +NK +A +L AKL + ++R E WG Sbjct: 243 RILHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIR+YV PYQMVKDLRT E T V+DGDLD F+++ L Sbjct: 303 QIRNYVFHPYQMVKDLRTQHETTDVQGVMDGDLDPFIQSLL 343 >gi|152991913|ref|YP_001357634.1| peptide chain release factor 2 [Sulfurovum sp. NBC37-1] gi|166225117|sp|A6Q718|RF2_SULNB RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|151423774|dbj|BAF71277.1| peptide chain release factor 2 [Sulfurovum sp. NBC37-1] Length = 364 Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 168/352 (47%), Positives = 234/352 (66%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS+++ + + D +RL + +DP+ W + A + +E+ + + Sbjct: 13 LSKKMENISNIVKPDELKKRLDEIEEMQQDPNFWNDTANAGKISQEKTRTERILETYHNA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 D + D + E+A E D L+ ++ + +K + + +LSGE DSN+A + +H Sbjct: 73 NDAVYDAIEYFEMAKAEKDEETLEMLYEDAETLKERTNALEVQMMLSGEHDSNNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+ML RMY RWAE+ FK E L+ GEEAGIK + +IKG NAYG+LK Sbjct: 133 PGAGGTESQDWASMLYRMYLRWAERHGFKVEVLDYQPGEEAGIKDVSFIIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVRISP+DSN++RHTSF+S+ V P +DD I+IEI + D RIDTYRASGAGGQH Sbjct: 193 VENGIHRLVRISPFDSNAKRHTSFTSVMVSPEIDDDIDIEIEDKDLRIDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SA+RITH PTG+VVQCQ +RSQHKNK+ A ML+++LYE E+ K++ + E Sbjct: 253 VNKTESAIRITHEPTGIVVQCQNDRSQHKNKSAAMKMLKSRLYEYEMAKKQAEIDGVE-- 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K++IGWG QIRSYV+QPYQ VKD R+ T+ +LDGD+D ++ L + Sbjct: 311 KSDIGWGHQIRSYVMQPYQQVKDTRSGQAFTNVDAILDGDIDKLLEGVLISQ 362 >gi|325105358|ref|YP_004275012.1| bacterial peptide chain release factor 2 (bRF-2) [Pedobacter saltans DSM 12145] gi|324974206|gb|ADY53190.1| bacterial peptide chain release factor 2 (bRF-2) [Pedobacter saltans DSM 12145] Length = 362 Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 147/350 (42%), Positives = 221/350 (63%), Gaps = 2/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ L D D + L T +P W N EA+ ++ + + Sbjct: 9 LRDRITSLRRHLDIDAKLIELHREEAMTLEPTFWDNPKEAEKILHTIKIRKSWTEAYSNA 68 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D ++ E D + + + +E +F+++LS E D +A L++ Sbjct: 69 NAAVEDLAVMYEFYQSGDATADE--VDEAYAYAQKMLEELEFKNMLSAEEDQLNAVLQIT 126 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML+RMY W EK K + +G+ AGIKS TL +G AYG LK Sbjct: 127 AGAGGTESCDWASMLMRMYIMWGEKHGCKVIEQDSQEGDVAGIKSVTLQFEGDFAYGHLK 186 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVRISP+DSN++RHTSF+S++VYP++DD+I+I+++ +D +T+R+ GAGGQ+ Sbjct: 187 GENGVHRLVRISPFDSNAKRHTSFASVYVYPLIDDNIDIQVNPADLEFETFRSGGAGGQN 246 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++AVR+ H PTG++++ Q+ RSQ +NK A +L+++LYE+E++KR E + ES Sbjct: 247 VNKVETAVRLYHKPTGIIIKNQESRSQLQNKENAIRLLKSQLYEIEMRKRREKSAAIESD 306 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K +I WG QIR+YVL PY+++KD RT+ E ++ DVLDGDLD+F+KA L Sbjct: 307 KKKIEWGSQIRNYVLHPYKLIKDNRTDYETSNVQDVLDGDLDEFIKAYLM 356 >gi|213019226|ref|ZP_03335033.1| protein chain release factor b [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212995335|gb|EEB55976.1| protein chain release factor b [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 337 Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 170/337 (50%), Positives = 237/337 (70%), Gaps = 1/337 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 RL L+++ + +LWQ+ +A+ +++ER + + I +++ D++ L+ A++ Sbjct: 1 MKLRLEELDSQASNDNLWQDNQKAQEILKERSKIKHEIESFSKLESDYNDSISLMRSAID 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E+D E L +++ ++ K+ ESL +GEAD+N+ +LE+H+GAGGTES DW ML+ Sbjct: 61 ENDEEFFSEVKGELVKLEKLIKLKETESLFTGEADNNNCFLEIHSGAGGTESNDWTEMLM 120 Query: 139 RMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMYTRWAE FK E +E DG+ GIKS T+ I G AYGW K E GVHRLVRISP+D Sbjct: 121 RMYTRWAEIYHNFKVEVVEKLDGDAVGIKSTTIKIIGEKAYGWAKSESGVHRLVRISPFD 180 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 +N +RHTSF+S+ V PV++DSI+I + E D +IDTYRASGAGGQHVN T+SAVRITHIPT Sbjct: 181 ANGKRHTSFASVGVTPVIEDSIDIVVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPT 240 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 GVV QCQ RSQHKNK +A +L+ +LY++EL+K+E+ K +IGWG QIRSYV+ Sbjct: 241 GVVAQCQNGRSQHKNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGSQIRSYVM 300 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PYQMVKDLRT E + + V DG++D F+ + L +K Sbjct: 301 HPYQMVKDLRTGHEVGNINSVFDGNIDCFIVSVLELK 337 >gi|254973803|ref|ZP_05270275.1| peptide chain release factor 2 [Clostridium difficile QCD-66c26] gi|260681922|ref|YP_003213207.1| peptide chain release factor 2 [Clostridium difficile CD196] gi|260685520|ref|YP_003216653.1| peptide chain release factor 2 [Clostridium difficile R20291] gi|260208085|emb|CBA60326.1| peptide chain release factor 2 [Clostridium difficile CD196] gi|260211536|emb|CBE01711.1| peptide chain release factor 2 [Clostridium difficile R20291] Length = 338 Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 161/329 (48%), Positives = 232/329 (70%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 K W + A+ +++E + L + + ++ L D +L+E+ LEEDD S+ + Sbjct: 8 EEKMNQQDFWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEDDDSVER 67 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 + +++ ++ ++ + ++LL+GE D N+A L ++AG GG ++QDWA MLLRMY RW+E Sbjct: 68 DIEKSIESMEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSE 127 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + +K + L+I EAGIK+AT+L++G NAYG+LK E+GVHRLVRISP+D + +RHTSF Sbjct: 128 SKGYKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSF 187 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +SI V P +D++IE+EI+ SD +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ E Sbjct: 188 ASIDVTPELDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNE 247 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQH NK +A +L AKL EL+ +++E + ++I WG QIRSYV QPY++VKD Sbjct: 248 RSQHLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWGSQIRSYVFQPYKLVKDH 307 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 RTN E + V++G++D F+ L + K Sbjct: 308 RTNAEFGNVDSVMNGNIDLFINEYLKMNK 336 >gi|58696790|ref|ZP_00372322.1| peptide chain release factor 2 [Wolbachia endosymbiont of Drosophila simulans] gi|58698424|ref|ZP_00373334.1| peptide chain release factor 2 [Wolbachia endosymbiont of Drosophila ananassae] gi|58698511|ref|ZP_00373415.1| peptide chain release factor 2 [Wolbachia endosymbiont of Drosophila ananassae] gi|225630212|ref|YP_002727003.1| Protein chain release factor B [Wolbachia sp. wRi] gi|58534979|gb|EAL59074.1| peptide chain release factor 2 [Wolbachia endosymbiont of Drosophila ananassae] gi|58535047|gb|EAL59136.1| peptide chain release factor 2 [Wolbachia endosymbiont of Drosophila ananassae] gi|58537012|gb|EAL60158.1| peptide chain release factor 2 [Wolbachia endosymbiont of Drosophila simulans] gi|225592193|gb|ACN95212.1| Protein chain release factor B [Wolbachia sp. wRi] Length = 336 Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 169/331 (51%), Positives = 238/331 (71%), Gaps = 1/331 (0%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL L+++ + +LWQ+ +A+ +++ER + N + +++ D + L++ A++E+D Sbjct: 2 RLEELDSQASNDNLWQDNQKAQEILKERSKIKNDVESFLKLESDYNDAISLMKSAIDEND 61 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 E + L +++ ++YK+ ESL +GEAD+N+ +LE+H+GAGGTES DWA ML+RMY Sbjct: 62 EEFFSEVENELAKLEKLIKYKETESLFTGEADNNNCFLEIHSGAGGTESNDWAEMLMRMY 121 Query: 142 TRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 RWAE FK E +E +GE GIKSA + I G AYGW K E G+HRLVRISP+D+N Sbjct: 122 VRWAEIYHNFKVEVVEKLEGESVGIKSAMIKIVGEKAYGWAKSESGIHRLVRISPFDANG 181 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 +RHTSF+S+ V PV++DSI+I + E D +IDTYRASGAGGQHVN T+SAVRITHIPTGVV Sbjct: 182 KRHTSFASVGVTPVIEDSIDIAVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTGVV 241 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 VQCQ RSQH+NK +A +L+ +LY++EL+K+E+ K +IGWG QIRSYV+ PY Sbjct: 242 VQCQNGRSQHRNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGNQIRSYVMHPY 301 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QMVKDLRT E + + V DG++D F+ + L Sbjct: 302 QMVKDLRTGHEVGNINSVFDGNIDCFIVSVL 332 >gi|283783522|ref|YP_003374276.1| peptide chain release factor 2 [Gardnerella vaginalis 409-05] gi|283441040|gb|ADB13506.1| peptide chain release factor 2 [Gardnerella vaginalis 409-05] Length = 378 Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 141/352 (40%), Positives = 212/352 (60%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + + + D D+ ++ L + +P LW + A+ + + + + ++ + Sbjct: 13 VEAKYSSISKALDVDSLKATIADLEKQAAEPGLWDDSEHAQQVTSKLSAAQSQLKRLQAV 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 R+ D L+EL EE D + E + L I E++ + ++LL GE D+ A + + Sbjct: 73 DQRIEDTKTLIELGQEEGDADSMSEAQEELGNIAHELDDMEVQTLLDGEYDARSAVVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ D+A MLLRMY RWAE+ +KT+ ++ EEAGIKSAT + P AYG L Sbjct: 133 SGAGGVDAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HR+VRISP+D+ RR T FS++ V P+V+ + I+I +SD R+DT++ASG GGQ Sbjct: 193 VEGGTHRMVRISPFDNQGRRQTGFSAVEVIPLVEATDHIDIPDSDIRVDTFQASGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT SAVRITH+PTG+VV Q ERSQ +N+A A +L+++L L+ + Sbjct: 253 VNTTYSAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLKHAEEAAKKKELAGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD+D F++A + + Sbjct: 313 -IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWR 363 >gi|99035041|ref|ZP_01314835.1| hypothetical protein Wendoof_01000330 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 336 Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 169/331 (51%), Positives = 237/331 (71%), Gaps = 1/331 (0%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL L+++ + LWQ+ +A+ +++ER + N + +++ D + L++ A++E+D Sbjct: 2 RLEELDSQASNDDLWQDNQKAQEVLKERSKIKNDVESFLKLESDYNDAISLMKSAIDEND 61 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 E + L +++ ++YK+ ESL +GEAD+N+ +LE+H+GAGGTES DWA ML+RMY Sbjct: 62 EEFFSEVENELAKLEKLIKYKETESLFTGEADNNNCFLEIHSGAGGTESNDWAEMLMRMY 121 Query: 142 TRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 RWAE FK E +E +GE GIKSA + I G AYGW K E G+HRLVRISP+D+N Sbjct: 122 IRWAEIYHNFKVEVVEKLEGESVGIKSAMIKIVGEKAYGWAKSESGIHRLVRISPFDANG 181 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 +RHTSF+S+ V PV++DSI+I + E D +IDTYRASGAGGQHVN T+SAVRITHIPTGVV Sbjct: 182 KRHTSFASVGVTPVIEDSIDIAVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTGVV 241 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 VQCQ RSQH+NK +A +L+ +LY++EL+K+E+ K +IGWG QIRSYV+ PY Sbjct: 242 VQCQNGRSQHRNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGNQIRSYVMHPY 301 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QMVKDLRT E + + V DG++D F+ + L Sbjct: 302 QMVKDLRTGHEVGNINSVFDGNIDCFIVSVL 332 >gi|116671212|ref|YP_832145.1| peptide chain release factor 2 [Arthrobacter sp. FB24] gi|229576665|sp|A0JYC5|RF2_ARTS2 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|116611321|gb|ABK04045.1| bacterial peptide chain release factor 2 (bRF-2) [Arthrobacter sp. FB24] Length = 371 Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 138/352 (39%), Positives = 217/352 (61%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + + ++ L+ + +P+LW + A+ + H + + + + Sbjct: 13 LRATYSSIENVSNVEELKEDIAELSERAGEPNLWDDPAAAQKITSRLSHRQSELERLNTL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 R+ D +L+EL +EDD + E + L+ I+ ++ + +LLSGE D +A + + Sbjct: 73 VSRIDDLEVLVELGQDEDDADSMGEAAAELESIRKSLKDLEVVTLLSGEFDEREAVVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A MLLRMY RWAE+ + T ++ EEAG+KSAT + P AYG L Sbjct: 133 AGAGGVDAADFAEMLLRMYLRWAERHGYPTTIMDTSYAEEAGLKSATFEVNAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ + I+I +++ R+D +R+SG GGQ Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDSIDIPDNEIRVDVFRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG VV Q E+SQ +N+A A +L+++L L+ ++ + Sbjct: 253 VNTTDSAVRLTHIPTGTVVSMQNEKSQLQNRAAALRVLQSRLLLLKKEQEDAEKKAFAGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + S V DG++DDF+ A + + Sbjct: 313 -VKASWGDQMRSYVLNPYQMVKDLRTEHEVGNTSAVFDGEIDDFIDAGIRWR 363 >gi|88809865|ref|ZP_01125371.1| peptide chain release factor 2 [Synechococcus sp. WH 7805] gi|88786249|gb|EAR17410.1| peptide chain release factor 2 [Synechococcus sp. WH 7805] Length = 356 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 148/343 (43%), Positives = 207/343 (60%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD R L P W + A+ MR + + ++ Q + D Sbjct: 3 RTVFDVPALNARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAMLQQLETWQGAVSDAQ 62 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LEL E D +L E L +++ +++ + E LLSGE D A L ++AGAGGT++ Sbjct: 63 ATLELYDLEPDEDMLGEAQGGLNQLRRDLDRWELERLLSGEYDKEGAVLSINAGAGGTDA 122 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRWAE R K E+ +GEEAGIKSAT+ I+G AYG+L+ E+G HRL Sbjct: 123 QDWAQMLLRMYTRWAEDRGMKVTVDELSEGEEAGIKSATIEIEGRYAYGYLRNEKGTHRL 182 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+++N +R TSF+ + V P +++ ++I+I + D + T R+ GAGGQ+VN ++AV Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKLEEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RI HIPTG+ V+C QERSQ +NK +A +L+AKL + ++R E WG Sbjct: 243 RILHIPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIR+YV PYQMVKDLRT E V+DGDL+ F++A L Sbjct: 303 QIRNYVFHPYQMVKDLRTQEETNDVQGVMDGDLEPFIQALLRQ 345 >gi|88812905|ref|ZP_01128149.1| hypothetical protein NB231_00155 [Nitrococcus mobilis Nb-231] gi|88789827|gb|EAR20950.1| hypothetical protein NB231_00155 [Nitrococcus mobilis Nb-231] Length = 325 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 175/324 (54%), Positives = 228/324 (70%), Gaps = 1/324 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P +W + A L RER L +S ++ + L D LLELA E+D + L E Sbjct: 1 MEQPDVWNDPERAHELNRERVRLQTLVSSLERLTRGLADTAELLELARTENDEATLAELD 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + E+E +F + SGE D +A+L++ AG+GGTE+QDWANMLLRMY RW E+++ Sbjct: 61 ADVTGYQSEIEALEFRRMFSGEMDERNAFLDIQAGSGGTEAQDWANMLLRMYLRWVEQKR 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E +E +GE AGIKSATL I+G A+GWL+ E GVHRLVR SP+DS +RRHTSF+++ Sbjct: 121 FTAEIIEFSEGEVAGIKSATLRIEGDYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFAAV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 +V P +DD++E+EI+ +D RID YRASGAGGQHVN T+SAVRITH+PTG+V QCQ +RSQ Sbjct: 181 FVSPELDDAVEVEINPADLRIDVYRASGAGGQHVNRTESAVRITHMPTGIVTQCQNDRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 HKNKA A LRAKLYELE+ KR E A+ E SK +IGWG QIRSYVL +KDLRT Sbjct: 241 HKNKATAMKQLRAKLYELEMHKRREQADQVEESKADIGWGSQIRSYVLD-QSRIKDLRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 +E VL+G LD F++A+L Sbjct: 300 VEIGHTQAVLNGALDPFIEASLKA 323 >gi|219685347|ref|ZP_03540166.1| peptide chain release factor 2 [Borrelia garinii Far04] gi|219673120|gb|EED30140.1| peptide chain release factor 2 [Borrelia garinii Far04] Length = 350 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 149/347 (42%), Positives = 213/347 (61%), Gaps = 4/347 (1%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG FD ++ + + W + A+ +++ + L N I +E+ +++ Sbjct: 5 KAFGGSFDKKEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIK 64 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L ++ + ++ + + S E D N A+L +H+GAGG Sbjct: 65 DLSDL---CEIIENEKDINSLEIEFNVLEKQYKDLLTISYFKEELDINSAFLTIHSGAGG 121 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DW ML RMY+R+AE++K+KTE +++ + E GIKS T+ IKG AYG LK E G+ Sbjct: 122 TEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGI 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRL+RISP+D+ +RHTSF+S++V PV+D+ IEI I D RIDTYRASGAGGQHVN T Sbjct: 181 HRLIRISPFDAAKKRHTSFASVFVDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHVNKTS 240 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHI TG+V Q Q +RSQHKNK A +L+++LYE K +E + K EI Sbjct: 241 SAVRITHIETGIVTQSQSDRSQHKNKDMAMKVLKSRLYEYYKNKEDEKNKSKQELKKEIS 300 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYV QPY +VKD RT E ++ + V+DG++D+F++ L K Sbjct: 301 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 347 >gi|307155327|ref|YP_003890711.1| hypothetical protein Cyan7822_5564 [Cyanothece sp. PCC 7822] gi|306985555|gb|ADN17436.1| hypothetical protein Cyan7822_5564 [Cyanothece sp. PCC 7822] Length = 370 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 154/360 (42%), Positives = 225/360 (62%), Gaps = 8/360 (2%) Query: 2 KLSRQLNCLGG-------LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN 54 +L R++ +G D ++ L P W + A+ ++E L + Sbjct: 5 ELKREIELIGSRLGKTQDYLDLPTLGAKIKDLEQVAAQPEFWDSPDMAQTTLQELNELKS 64 Query: 55 AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114 A+ ++ Q +L D ++EL E+D S+L+E NL+++ E+E + + LLSG D+ Sbjct: 65 ALELYQQWQTQLEDAKAIVELLELEEDTSLLEEAQTNLEQLNHELERWELQQLLSGLYDA 124 Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 A L ++AGAGGT++QDWA MLLRMYTRW EK+ +K EI +G+EAG+KSATL I+G Sbjct: 125 KGAVLTINAGAGGTDAQDWAEMLLRMYTRWGEKQGYKVHLAEISEGDEAGLKSATLEIEG 184 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTY 233 AYG+LKGE+G HRLVRISP+++N +R TSF+ + V P +++ +EI E D I T Sbjct: 185 RYAYGYLKGEKGTHRLVRISPFNANGKRQTSFAGVEVMPNLGVEAVNVEIPEKDLEITTS 244 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 R+ G GGQ+VN ++AVR+ HIPTG+ V+C QERSQ +NK +A +L+AKL + ++R Sbjct: 245 RSGGKGGQNVNKVETAVRVVHIPTGLAVRCTQERSQLQNKEKALALLKAKLLVILTEQRA 304 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + E WG QIR+YV PYQMVKDLRTN+E + V+DGDL+ F++A L Sbjct: 305 KEIAQIRGDMVEAAWGNQIRNYVFHPYQMVKDLRTNVETSDVGAVMDGDLNGFIEAYLRQ 364 >gi|312865919|ref|ZP_07726140.1| peptide chain release factor 2 [Streptococcus downei F0415] gi|311098323|gb|EFQ56546.1| peptide chain release factor 2 [Streptococcus downei F0415] Length = 326 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 147/325 (45%), Positives = 209/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L ++++ ++ + LE+ E+D S+ + Sbjct: 1 MTEPDFWDDNITAQKTSQELNELKQTYDTFNQMEELSEESELYLEM--LEEDASVQGDLE 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L ++ + + LLS D+N+A LE+H G+GGTE+QDW +MLLRMY R+ + Sbjct: 59 ETLAKLDKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYQRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GP+AYG LK E GVHRLVRISP+DS RRHTSF+SI Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSI 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q Sbjct: 179 EVMPELDDTIEVEIRDDDLKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY+LE +K+ + + + K EI WG QIRSYV PY MVKD RT Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAQEVSALKGDKKEITWGSQIRSYVFTPYTMVKDHRTG 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DGD+D F+ A L + Sbjct: 299 YEVAQVDKVMDGDIDGFIDAYLKWR 323 >gi|220913146|ref|YP_002488455.1| peptide chain release factor 2 [Arthrobacter chlorophenolicus A6] gi|254790908|sp|B8HBH8|RF2_ARTCA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|219860024|gb|ACL40366.1| peptide chain release factor 2 [Arthrobacter chlorophenolicus A6] Length = 371 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 138/352 (39%), Positives = 216/352 (61%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + D + + ++ L+ + +P LW + A+ + H + + + + Sbjct: 13 LRATYESIERVTDMEALREDIAELSERAGEPDLWDDPAAAQKITSRLSHRQSELERLTTL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 R+ D +L+EL +E D + E + L+ I+ ++ + +LLSGE D +A + + Sbjct: 73 ASRIDDLEVLVELGQDEGDADSMGEAAAELESIQKALKNLEVVTLLSGEYDEREAVVSIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A ML+RMY RWAE+ + T ++ EEAG+KSAT +K P A+G L Sbjct: 133 AGAGGVDAADFAEMLMRMYLRWAERHGYPTTVMDTSYAEEAGLKSATFEVKAPYAFGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ + I+I +++ R+D +R+SG GGQ Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDSIDIPDNEIRVDVFRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTGVVV Q E+SQ +N+A A +L+++L L+ ++ + Sbjct: 253 VNTTDSAVRLTHIPTGVVVSMQNEKSQLQNRAAAMRVLQSRLLLLKKEQEDAEKKALAGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + S V DG++DDF+ A + + Sbjct: 313 -VKASWGDQMRSYVLNPYQMVKDLRTEHEVGNTSAVFDGEIDDFIDAGIRWR 363 >gi|28210088|ref|NP_781032.1| peptide chain release factor 2 [Clostridium tetani E88] gi|28202524|gb|AAO34969.1| bacterial peptide chain release factor 2 [Clostridium tetani E88] Length = 325 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 158/324 (48%), Positives = 223/324 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++P W+++ A+ + ++ + + + + +++R+ D+L+L+EL EE+D S E Sbjct: 1 MQEPDFWEDIKRAQEVTQQEKLIKDRLEKFDSLENRIEDSLVLIELMKEEEDISSAGEVL 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L +K E+E + E LLSGE D N+A + +HAG GGT++QDW MLLRMYTRWAEK+ Sbjct: 61 KELVLLKKEIESFRIEVLLSGEYDRNNAIMTLHAGVGGTDAQDWTEMLLRMYTRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K + L+ G+EAGIKS TL I G AYG+LK E+GVHR+VRISPY++N +R TSF+S+ Sbjct: 121 YKVDTLDFLPGDEAGIKSVTLKITGDFAYGYLKAEKGVHRIVRISPYNANGKRQTSFASL 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + P + + +IEI + D ++DTYRASGAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ Sbjct: 181 ELIPELTEDQDIEIIDDDLKVDTYRASGAGGQHVNKTESAVRITHIPTGIVVQCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H N+ A ML+AKL EL+ + +E ++GWG QIRSYV PY +VKD RT+ Sbjct: 241 HSNRDTALKMLKAKLVELKEAEHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTS 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + + V+DGD+D F+ L Sbjct: 301 AETGNLTAVMDGDIDLFINEYLKA 324 >gi|255091190|ref|ZP_05320668.1| peptide chain release factor 2 [Clostridium difficile CIP 107932] gi|255099304|ref|ZP_05328281.1| peptide chain release factor 2 [Clostridium difficile QCD-63q42] gi|255305089|ref|ZP_05349261.1| peptide chain release factor 2 [Clostridium difficile ATCC 43255] gi|255312847|ref|ZP_05354430.1| peptide chain release factor 2 [Clostridium difficile QCD-76w55] gi|255515606|ref|ZP_05383282.1| peptide chain release factor 2 [Clostridium difficile QCD-97b34] gi|255648700|ref|ZP_05395602.1| peptide chain release factor 2 [Clostridium difficile QCD-37x79] gi|306518820|ref|ZP_07405167.1| peptide chain release factor 2 [Clostridium difficile QCD-32g58] Length = 339 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 161/329 (48%), Positives = 232/329 (70%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 K W + A+ +++E + L + + ++ L D +L+E+ LEEDD S+ + Sbjct: 9 EEKMNQQDFWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEDDDSVER 68 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 + +++ ++ ++ + ++LL+GE D N+A L ++AG GG ++QDWA MLLRMY RW+E Sbjct: 69 DIEKSIESMEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSE 128 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + +K + L+I EAGIK+AT+L++G NAYG+LK E+GVHRLVRISP+D + +RHTSF Sbjct: 129 SKGYKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSF 188 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +SI V P +D++IE+EI+ SD +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ E Sbjct: 189 ASIDVTPELDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNE 248 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQH NK +A +L AKL EL+ +++E + ++I WG QIRSYV QPY++VKD Sbjct: 249 RSQHLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWGSQIRSYVFQPYKLVKDH 308 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 RTN E + V++G++D F+ L + K Sbjct: 309 RTNAEFGNVDSVMNGNIDLFINEYLKMNK 337 >gi|224438340|ref|ZP_03659267.1| peptide chain release factor 2 [Helicobacter cinaedi CCUG 18818] gi|313144782|ref|ZP_07806975.1| peptide chain release factor 2 [Helicobacter cinaedi CCUG 18818] gi|313129813|gb|EFR47430.1| peptide chain release factor 2 [Helicobacter cinaedi CCUG 18818] Length = 365 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 174/349 (49%), Positives = 239/349 (68%), Gaps = 2/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + D+ +R+ +N W + +A + +E++ + +S E+ Sbjct: 13 LQNKAQNIAKILNPDSLQKRMDEINALESHQEFWNDAKKAGEITKEKRKCERILSTYTEM 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L E+A E D S L+ +N++ ++ ++ + E +LSGE DS++A + + Sbjct: 73 KAELDDAKELFEIAESEGDSSTLELLFENVESLQSHIQKVEIEVMLSGEFDSSNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+ML RMY RW+E+R FK E L+ DGEEAGIK A +IKG NAYG+ K Sbjct: 133 PGAGGTESQDWASMLYRMYLRWSERRGFKVELLDHQDGEEAGIKGAAFIIKGENAYGYAK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ V P + + I+IEI + D RIDTYRASGAGGQH Sbjct: 193 SENGVHRLVRISPFDANAKRHTSFASVQVSPELSEDIDIEILDKDIRIDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SA+RITH PTG+VVQCQ +RSQHKNKA A ML++KLYELE K+ E + + Sbjct: 253 VNKTESAIRITHFPTGIVVQCQNDRSQHKNKATAMKMLQSKLYELERLKQSE--GVANAE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K+EIGWG QIRSYVL PYQ VKDLR+N + VLDGD+DD +++ L Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDLRSNYATSDTEGVLDGDIDDLIESVL 359 >gi|313906145|ref|ZP_07839494.1| peptide chain release factor 2 [Eubacterium cellulosolvens 6] gi|313469032|gb|EFR64385.1| peptide chain release factor 2 [Eubacterium cellulosolvens 6] Length = 332 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 164/325 (50%), Positives = 217/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E+P W N EA+ +E L N ++ D +++E+ EEDD SI+ E Sbjct: 1 MEEPDFWNNPDEAQKQTKELGDLKNDRDTYAKLVSTKEDIEMMIEMGEEEDDESIVPEVR 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L ++ + ++LLS E D N+A + ++AGAGGTE+ DW ML RMYTRWAE++ Sbjct: 61 EMLDDFIETLDGVRIKTLLSEEYDVNNAIIRLNAGAGGTEAMDWCGMLYRMYTRWAERKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L++ +G+EAGIKS + G NAYG LK E GVHRLVRISP+++ ++R TSF S Sbjct: 121 FAIEELDMQEGDEAGIKSVMFQVNGTNAYGLLKSESGVHRLVRISPFNAQAKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P ++D I+IE+ + D R+DTYR+SGAGGQH+N T SA+RITH+PTG+VV CQ ERSQ Sbjct: 181 DVMPELNDDIDIEVRDEDIRVDTYRSSGAGGQHINKTSSAIRITHLPTGIVVTCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK +A +L+AKLY LE +K+ E A T+I WG QIRSYVLQPY MVKDLRTN Sbjct: 241 FQNKDKAMQVLKAKLYMLEQEKQAEKAAGIRGEVTDIAWGHQIRSYVLQPYTMVKDLRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 EK S VLDGDLD F+ A L + Sbjct: 301 AEKAQASAVLDGDLDPFINAYLKWQ 325 >gi|223038905|ref|ZP_03609197.1| peptide chain release factor 2 [Campylobacter rectus RM3267] gi|222879878|gb|EEF14967.1| peptide chain release factor 2 [Campylobacter rectus RM3267] Length = 366 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 166/353 (47%), Positives = 228/353 (64%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ ++ + G+ ++ RL + D + WQ++ +A + +E+ + N ++ Sbjct: 13 LNTKIENIAGVVKPESIKTRLKEIEELENDQNFWQDIAKAGAIGKEKTKISNILNNFLNA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + D L ELA E+D + ++ ++ + LLSGE D +A + +H Sbjct: 73 KSAVDDAKDLYELANSENDEETINSLFAEAGELEDKIVNLEISMLLSGEDDGKNAIVTIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA+ML RMY R+ E+ FK E L+ +GEEAG+K + ++KG NAYG+LK Sbjct: 133 PGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFIVKGVNAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSF+S+ V P +DD IEIEI E D +IDTYRA GAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFTSVMVSPEIDDDIEIEIDEKDLKIDTYRAGGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML+++LYELEL K++E A E Sbjct: 253 VNKTESAVRITHAPTGIVVQCQNDRSQHKNKATAMKMLKSRLYELELMKQQEAAGSIE-- 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+ + +LDGD+ ++ L +K Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAYSQTDAILDGDIKKLIEGVLVSQK 363 >gi|294786673|ref|ZP_06751927.1| peptide chain release factor 2 [Parascardovia denticolens F0305] gi|294485506|gb|EFG33140.1| peptide chain release factor 2 [Parascardovia denticolens F0305] Length = 377 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 140/353 (39%), Positives = 208/353 (58%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + D+ +++ L + P LW + A+ + + E Sbjct: 12 EARSKYETITQAVGLDSLRGKIAELEKQASAPGLWDDPETAQRVTSNLSASQAEYKRLTE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 RL D L L +EE+D QE L+++ ++ + ++LL GE D+ A + + Sbjct: 72 AGQRLDDIDTLYSLGMEEEDEDSKQEAWSELKKLSKDLSDIEIQTLLDGEYDNRAAVVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ DWA ML+RMY RWAE+ ++K + ++ EEAGIKSAT + P AYG L Sbjct: 132 RSGAGGVDAADWAQMLMRMYIRWAERHQYKVQVIDTSYAEEAGIKSATFRVDAPYAYGKL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+NSRR TSF+++ V P+V+ + I++ +SD R+DTY + G GGQ Sbjct: 192 SVEGGTHRLVRISPFDNNSRRQTSFAAVEVIPLVEPTDHIDVPDSDVRVDTYMSHGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTT SAVR+TH+PTG+VV Q ERSQ +N+A A +L+++L L+ ++ Sbjct: 252 GVNTTYSAVRLTHLPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLKQEEEAAKKKELAG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + P V DGD+D F+ A + + Sbjct: 312 D-IKASWGDQMRSYVLHPYQMVKDLRTGYETSDPQAVFDGDIDGFIDAGIRWR 363 >gi|190571741|ref|YP_001976099.1| protein chain release factor b [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190358013|emb|CAQ55482.1| protein chain release factor b [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 335 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 170/334 (50%), Positives = 237/334 (70%), Gaps = 1/334 (0%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL L+++ + +LWQ+ +A+ +++ER + + I +++ D++ L+ A++E+D Sbjct: 2 RLEELDSQASNDNLWQDNQKAQEILKERSKIKHEIESFSKLESDYNDSISLMRSAIDEND 61 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 E L +++ ++ K+ ESL +GEAD+N+ +LE+H+GAGGTES DW ML+RMY Sbjct: 62 EEFFSEVKGELVKLEKLIKLKETESLFTGEADNNNCFLEIHSGAGGTESNDWTEMLMRMY 121 Query: 142 TRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 TRWAE FK E +E DG+ GIKS T+ I G AYGW K E GVHRLVRISP+D+N Sbjct: 122 TRWAEIYHNFKVEVVEKLDGDAVGIKSTTIKIIGEKAYGWAKSESGVHRLVRISPFDANG 181 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 +RHTSF+S+ V PV++DSI+I + E D +IDTYRASGAGGQHVN T+SAVRITHIPTGVV Sbjct: 182 KRHTSFASVGVTPVIEDSIDIVVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTGVV 241 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 QCQ RSQHKNK +A +L+ +LY++EL+K+E+ K +IGWG QIRSYV+ PY Sbjct: 242 AQCQNGRSQHKNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGSQIRSYVMHPY 301 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QMVKDLRT E + + V DG++D F+ + L +K Sbjct: 302 QMVKDLRTGHEVGNINSVFDGNIDCFIVSVLELK 335 >gi|113953765|ref|YP_731847.1| peptide chain release factor 2 [Synechococcus sp. CC9311] gi|113881116|gb|ABI46074.1| peptide chain release factor 2, programmed frameshift [Synechococcus sp. CC9311] Length = 375 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 146/352 (41%), Positives = 208/352 (59%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ +L D + L P W + A+ MR + + + + Sbjct: 13 ELTDRLGHAQDCLDVPALNAKQQDLEQLAAQPDFWNDQQNAQKQMRRLDEVKAQLQQLVD 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D LEL E D +L E L +++ ++ + E LLSGE D A L + Sbjct: 73 WRGAIDDGQATLELHELEPDEDLLGEAQQGLNQLRQALDRWELERLLSGEYDKEGAVLSI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGT++QDWA MLLRMYTRWAE + E+ +GEEAGIKS T+ I+G AYG+L Sbjct: 133 NAGAGGTDAQDWAQMLLRMYTRWAEDQGMSVSVNELSEGEEAGIKSTTIEIEGRYAYGYL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E+G HRLVRISP+++N +R TSF+ + V P +D+ +E++I E D + T R+ GAGGQ Sbjct: 193 RNEKGTHRLVRISPFNANDKRQTSFAGVEVMPKLDEEVELDIPEKDLEVTTSRSGGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN ++AVRI H+PTG+ V+C QERSQ +NK +A +L+AKL + ++R Sbjct: 253 NVNKVETAVRILHVPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 E WG QIR+YV PYQMVKDLRT E T V+DGDL+ F++A L Sbjct: 313 DIVEAAWGNQIRNYVFHPYQMVKDLRTQEETTDVQGVMDGDLNPFIQALLRQ 364 >gi|148243347|ref|YP_001228504.1| peptide chain release factor 2 [Synechococcus sp. RCC307] gi|147851657|emb|CAK29151.1| Protein chain release factor B [Synechococcus sp. RCC307] Length = 349 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 144/339 (42%), Positives = 209/339 (61%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 D R L P W + A+ MR+ + + ++ + + D LE Sbjct: 1 DVPALTARQQDLEQLAAQPDFWDDQNNARKQMRQLDDVKAQLEQLRTWRASVDDAAATLE 60 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 L E D ++L+E + LQ ++L ++ + E LLSG D A + ++AGAGGT++QDWA Sbjct: 61 LYDLEPDDALLEEANGGLQELRLALDRWELERLLSGTYDQEGAVISINAGAGGTDAQDWA 120 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 ML+RMYTRWAE R K E+ +GEEAGIKS T+ ++G AYG+L+ E+G HRLVRIS Sbjct: 121 LMLMRMYTRWAEDRGMKVTVDELSEGEEAGIKSCTIEVEGRYAYGYLRNEKGTHRLVRIS 180 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+++N +R TSF+ + V P +++ +++EI + D + T R+ GAGGQ+VN ++AVRI H Sbjct: 181 PFNANDKRQTSFAGVEVMPKLEEEVDLEIPDKDLEVTTSRSGGAGGQNVNKVETAVRILH 240 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 IPTG+ V+C QERSQ +NK +A +L++KL + ++R E WG QIR+ Sbjct: 241 IPTGLAVRCTQERSQLQNKEKAMALLKSKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRN 300 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 YV PYQMVKDLRTN E T V+DGDLD F+++ L Sbjct: 301 YVFHPYQMVKDLRTNEETTDVQGVMDGDLDPFIQSLLRQ 339 >gi|227499885|ref|ZP_03929978.1| peptide chain release factor RF2 [Anaerococcus tetradius ATCC 35098] gi|227217994|gb|EEI83267.1| peptide chain release factor RF2 [Anaerococcus tetradius ATCC 35098] Length = 333 Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats. Identities = 157/330 (47%), Positives = 217/330 (65%), Gaps = 2/330 (0%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 K++ P W + +A +M + ++ K++++ + DN+ LL+L D+ Sbjct: 2 EKKSQSPDFWNDSDKASQIMADLSLKKEDLNEYKKLEEGIRDNVDLLDLVELSDNKEEDT 61 Query: 87 ETSDNLQRI--KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 + + + ++ LSGE D N+ Y+ ++AGAGG E+ DWA+ML RMY R+ Sbjct: 62 VNAVEESLEALYKLADKMKLKTQLSGEYDKNNCYISINAGAGGLEATDWADMLFRMYKRY 121 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 + +K E ++++ E GIKSATL +KGP AYG+LKGE+GVHRLVRISP+DS SRRHT Sbjct: 122 FDNVGYKYELKDLNNEEAGGIKSATLHVKGPYAYGYLKGEKGVHRLVRISPFDSQSRRHT 181 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 SF+S+ V+P +DD++EI+I SD RIDTYRASGAGGQHVN TDSAVRITHIPTGVV Q Sbjct: 182 SFASVDVFPELDDNLEIDIDPSDLRIDTYRASGAGGQHVNKTDSAVRITHIPTGVVATSQ 241 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 ERSQ +NK A N+L +KL +++ +++ E + ++I WG QIRSYV QPY MVK Sbjct: 242 AERSQIQNKQTAMNLLMSKLVQIKEEEQREKIEDIQGKYSQIAWGSQIRSYVFQPYTMVK 301 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 D RTN E + V+DGDL F+ A LA K Sbjct: 302 DHRTNYEMGNVEAVMDGDLQGFIDAYLASK 331 >gi|188586825|ref|YP_001918370.1| peptide chain release factor 2 (bRF-2) [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351512|gb|ACB85782.1| peptide chain release factor 2 (bRF-2) [Natranaerobius thermophilus JW/NM-WN-LF] Length = 344 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 163/337 (48%), Positives = 221/337 (65%), Gaps = 1/337 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 +RL L + +P W + AK + +ERQ L + IKE+ + + +++EL+ E Sbjct: 1 MEKRLKELEKQMTEPGFWDDQDRAKKVTQERQELKEHLDEIKELDELKDEVSVMIELSEE 60 Query: 79 EDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 ++ + + + ++ + +++L D N+A + +HAGAGGTESQDW ML Sbjct: 61 DETDGTNMKEIKQALFQFEEQLSEIRLKNMLKDRYDENNAIISLHAGAGGTESQDWVEML 120 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY RW E R F E L+ G+EAG+KS T+++KG A+G+LK E GVHRLVR+SP+D Sbjct: 121 HRMYIRWMEHRGFNYETLDFLPGDEAGVKSVTMMVKGKYAFGYLKSEAGVHRLVRVSPFD 180 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 S+ RRHTSF+S+ V P +DD IEI+I + D +IDTYRASGAGGQHVNTTDSAVRITH PT Sbjct: 181 SSGRRHTSFASMDVVPEIDDDIEIDIKDDDLKIDTYRASGAGGQHVNTTDSAVRITHHPT 240 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQCQ ERSQHKN+ A +L+AKL +E +KR + K EI WG QIRSYV Sbjct: 241 GIVVQCQNERSQHKNREVAMKILKAKLAAIEEEKRRQEQEAMRGDKKEIAWGSQIRSYVF 300 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY MVKD RTN+E+ + VLDG LD F++ L + Sbjct: 301 HPYTMVKDHRTNLEEGNADAVLDGKLDHFIQEYLKQR 337 >gi|269795803|ref|YP_003315258.1| peptide chain release factor 2 [Sanguibacter keddieii DSM 10542] gi|269097988|gb|ACZ22424.1| bacterial peptide chain release factor 2 (bRF-2) [Sanguibacter keddieii DSM 10542] Length = 372 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 141/356 (39%), Positives = 220/356 (61%), Gaps = 4/356 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D + R++ L+ + P LW + A+ + + I + Sbjct: 13 LRGTLATISAVTDPEALKIRIAELSDQASAPDLWDDTDAAQKVTTALSQAQTELDRIVNM 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQR---IKLEVEYKQFESLLSGEADSNDAYL 119 + R+ D +L+E+A E D ++ + + I+ ++ + +LLSGE D+ +A + Sbjct: 73 ESRIDDLEVLVEMATEGDGADDVETLEEAQKDLDGIRRDLGDLEVRTLLSGEWDAREAVV 132 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + AGAGG ++ D+A ML+RMY RWAE+ + T L+ EEAG+KSAT +K P A+G Sbjct: 133 SIRAGAGGVDAADFAEMLMRMYLRWAERHGYPTAVLDTSYAEEAGLKSATFEVKAPYAFG 192 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L E G HRLVRISP+D+ RR TSF+++ V P+++ + ++I +++ R+D +R+SG G Sbjct: 193 NLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHVDIPDNEIRVDVFRSSGPG 252 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L LE Q +E+ Sbjct: 253 GQSVNTTDSAVRLTHIPTGIVVSMQNEKSQIQNRAAAMRVLQSRL-LLERQAQEKAMKKE 311 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + + WG Q+RSYVLQPYQMVKDLRT E + S V DG++DDF++A + ++ Sbjct: 312 MAGDVKASWGDQMRSYVLQPYQMVKDLRTEHEVGNTSAVFDGEIDDFIEAGIRWRR 367 >gi|188582408|ref|YP_001925853.1| peptide chain release factor 2 [Methylobacterium populi BJ001] gi|179345906|gb|ACB81318.1| peptide chain release factor 2 [Methylobacterium populi BJ001] Length = 321 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 219/309 (70%), Positives = 254/309 (82%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD A++ IK+++ L D L+EL E D + + E + ++ ++ E +Q E Sbjct: 1 MRERQELDEAVTAIKKLEQDLEDAATLIELGEMEGDQASITEGENAIKAVEKEAASRQVE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D YLEVHAGAGGTESQDWANML RMY RWAE+RKFK E +E+ DGEEAGI Sbjct: 61 TLLSGEADGFDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKFKVEIVEMTDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K ATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSF+S+WVYPV+DD IEIEI E Sbjct: 121 KGATLLIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVIDDRIEIEIKE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYR+SGAGGQHVNTTDSAVRITH PTG+VV CQQERSQHKN+A AWNMLRA+LY Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHNPTGIVVACQQERSQHKNRATAWNMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE AN +SKT+IGWG QIRSYVLQPYQ+VKDLRT + T P +VLDGDLD Sbjct: 241 EAELKKREEKANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGTQSTDPDEVLDGDLDP 300 Query: 346 FMKATLAIK 354 FM+A+LA + Sbjct: 301 FMEASLAQR 309 >gi|226226984|ref|YP_002761090.1| peptide chain release factor 2 [Gemmatimonas aurantiaca T-27] gi|226090175|dbj|BAH38620.1| peptide chain release factor 2 [Gemmatimonas aurantiaca T-27] Length = 335 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 163/325 (50%), Positives = 220/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + A+ ++++ + L + +Q R+ L EL E D + + Sbjct: 1 MADPAFWNDQEHAREIVQQVKVLKGWVEPSDSLQSRIDSARELDELLSLEPDKGMNADLD 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +QRI +++ + +SLL G D DA LE+ AGAGGTE+QDWA+MLLR+YTRWAE++ Sbjct: 61 QEVQRILADLDAFELKSLLRGNDDYRDAQLEISAGAGGTEAQDWASMLLRLYTRWAERKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L++ DGEEAGIK A L IKG AYG+L+ E GVHRLVRISP+DS +RRHTSF+S+ Sbjct: 121 FDLEVLDLSDGEEAGIKGAVLEIKGQYAYGFLRPESGVHRLVRISPFDSQARRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 +VYPVV++ I IEI E D RID YRASGAGGQHVN T SAVRITHIP+G+V QQERSQ Sbjct: 181 FVYPVVNEEINIEIREEDLRIDVYRASGAGGQHVNKTSSAVRITHIPSGIVCASQQERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KNKA A L+ +LY+LE++K+ + +++K ++ +G QIRSYV QPY MV D R+ Sbjct: 241 FKNKATAMKQLKNRLYQLEIEKQAAVKAAFDANKQDVTFGSQIRSYVFQPYTMVNDHRSE 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 ++ V+DGD+D F+ A L + Sbjct: 301 LKIADVQKVMDGDIDPFIHAYLKQE 325 >gi|88803344|ref|ZP_01118870.1| peptide chain release factor RF-2 [Polaribacter irgensii 23-P] gi|88780910|gb|EAR12089.1| peptide chain release factor RF-2 [Polaribacter irgensii 23-P] Length = 365 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 144/350 (41%), Positives = 219/350 (62%), Gaps = 2/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++ ++ L + D + ++ KT +P W + EA++ ++E + ++ + Sbjct: 10 IADRIEKLKSYLEIDKKLIEIANEEEKTTNPGFWDHPKEAEVAIKELRFKKKWVTDYQHA 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 D ++L E E D + +E +F ++LS E DS A +++ Sbjct: 70 ITLNDDVIVLYEFYKEGDVAETEMDEQFEKVS--SFLEDIEFRNMLSEEGDSLAATIQIT 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DW ML RMY+ WAEK+ FK + L G+ AGIK+ T+ I+G A+GWLK Sbjct: 128 AGAGGTESCDWVEMLSRMYSMWAEKQGFKLKTLNYQAGDVAGIKTITIEIEGDFAFGWLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVRISP+DSN +RHT+F S++V+PV DDSIEI ++ +D I T R+SGAGGQ+ Sbjct: 188 GENGVHRLVRISPFDSNGKRHTTFGSVYVFPVADDSIEIAVNPADIEIVTARSSGAGGQN 247 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++ V++TH PTG+ +QC RSQH N+A A ML+++LYE+EL+K++ E+ Sbjct: 248 VNKVETKVQLTHKPTGIQIQCSNSRSQHDNRATAMKMLKSQLYEIELKKQQATRADIEAG 307 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K + WG QIR+YV+ PY++VKD+RT E + V+DG+++ F+K+ L Sbjct: 308 KLKNEWGSQIRNYVMHPYKLVKDVRTAYETGNVDAVMDGNINPFLKSYLM 357 >gi|223558105|gb|ACM91108.1| peptide chain release factor 2 [uncultured bacterium Rlip2] Length = 330 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 166/325 (51%), Positives = 219/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + A+ L +E L + + + D + L E+ +EE D + + Sbjct: 1 MGAPDFWDDAEAAQALNQELADLKGGVDTYNALVAKTDDLMTLWEMGMEEKDEGVEADVK 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +K E+ + E LLSGE D+N+AYLE+HAGAGGTE+QDW MLLRMY RWAE+ Sbjct: 61 AEYDSLKNELRSLELELLLSGEYDANNAYLELHAGAGGTEAQDWTQMLLRMYGRWAERHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L++ G+EAG+KS L +KG NAYG+LK E+GVHRLVRISP+DSN+RRHTSFS+ Sbjct: 121 FSVETLDLQPGDEAGVKSVMLFVKGHNAYGYLKSEKGVHRLVRISPFDSNARRHTSFSAC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P ++D+ E+EI D R+DTYR+SGAGGQH+N T SAVR+TH+PTG+VVQCQ ERSQ Sbjct: 181 DVMPEMEDAKEVEIDMDDVRVDTYRSSGAGGQHINKTSSAVRMTHMPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ MLRAKL+ELE +K+EE E + +I WG QIRSYV QPY MVKD RT Sbjct: 241 IQNREVCLRMLRAKLFELEEKKKEEERAKLEGVQQKIEWGSQIRSYVFQPYTMVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG++D F+++ LA K Sbjct: 301 EETGNVQAVMDGEIDPFIESFLAAK 325 >gi|254508224|ref|ZP_05120348.1| peptide chain release factor 2 [Vibrio parahaemolyticus 16] gi|219548841|gb|EED25842.1| peptide chain release factor 2 [Vibrio parahaemolyticus 16] Length = 320 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 168/317 (52%), Positives = 227/317 (71%), Gaps = 1/317 (0%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W A+ L +ER L+ + I +++ + D LLELA+EE+D E L + Sbjct: 2 WNEPERAQALGKERSALEAVVETIDQLEQGVEDVDGLLELAVEEEDQETFDEIEPELAEL 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + ++E +F + SG+ D++D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FKTE + Sbjct: 62 EAKLEKLEFRRMFSGDHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEVI 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E+ +GE AG+K AT+ I G AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP + Sbjct: 122 EVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEI 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DD+I+I+I+ SD RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK Q Sbjct: 182 DDNIDIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQ 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A LRAKL+ELE+QK+ E +K++IGWG QIRSYVL +KDLRT +E + Sbjct: 242 AMKQLRAKLFELEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNT 300 Query: 336 SDVLDGDLDDFMKATLA 352 VLDGDLD F++A+L Sbjct: 301 QAVLDGDLDKFIEASLK 317 >gi|296452520|ref|ZP_06894217.1| peptide chain release factor RF2 [Clostridium difficile NAP08] gi|296881068|ref|ZP_06905011.1| peptide chain release factor RF2 [Clostridium difficile NAP07] gi|296258625|gb|EFH05523.1| peptide chain release factor RF2 [Clostridium difficile NAP08] gi|296427934|gb|EFH13838.1| peptide chain release factor RF2 [Clostridium difficile NAP07] Length = 338 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 160/329 (48%), Positives = 232/329 (70%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 K W + A+ +++E + L + + ++ L D +L+E+ LEE+D S+ + Sbjct: 8 EEKMNKQDFWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEEDDSVER 67 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 + +++ ++ ++ + ++LL+GE D N+A L ++AG GG ++QDWA MLLRMY RW+E Sbjct: 68 DIEKSIESMEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSE 127 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + +K + L+I EAGIK+AT+L++G NAYG+LK E+GVHRLVRISP+D + +RHTSF Sbjct: 128 SKGYKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSF 187 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +SI V P +D++IE+EI+ SD +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ E Sbjct: 188 ASIDVTPELDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNE 247 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQH NK +A +L AKL EL+ +++E + ++I WG QIRSYV QPY++VKD Sbjct: 248 RSQHLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWGSQIRSYVFQPYKLVKDH 307 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 RTN E + V++G++D F+ L + K Sbjct: 308 RTNAEFGNVDSVMNGNIDLFINEYLKMNK 336 >gi|291326803|ref|ZP_06125920.2| peptide chain release factor 2 [Providencia rettgeri DSM 1131] gi|291312658|gb|EFE53111.1| peptide chain release factor 2 [Providencia rettgeri DSM 1131] Length = 320 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 176/318 (55%), Positives = 224/318 (70%), Gaps = 1/318 (0%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W A+ L +ER L+ + I ++ L D LLELA+E DD E L+++ Sbjct: 2 WNEPERAQALGKERSSLEAIVETIDQMTQGLEDVEGLLELAVEADDEDTFNEAEAELEQL 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + ++E +F + SGE DS D Y+++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE + Sbjct: 62 EGKLEQLEFRRMFSGEYDSADCYIDLQAGSGGTEAQDWASMLLRMYLRWAESKGFKTEII 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E DG+ AG+KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSFSS ++YP V Sbjct: 122 EESDGDVAGLKSATVKIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEV 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK Q Sbjct: 182 DDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQ 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A L+AKLYELE+QK+ E +K++IGWG QIRSYVL +KDLRT +E + Sbjct: 242 AMRQLKAKLYELEMQKKNADKQAMEENKSDIGWGSQIRSYVLDD-ARIKDLRTGVETRNT 300 Query: 336 SDVLDGDLDDFMKATLAI 353 VLDGDLD F++A+L Sbjct: 301 QAVLDGDLDKFIEASLKA 318 >gi|220933707|ref|YP_002512606.1| peptide chain release factor 1 [Thioalkalivibrio sp. HL-EbGR7] gi|254790905|sp|B8GLA1|RF1_THISH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|219995017|gb|ACL71619.1| peptide chain release factor 1 [Thioalkalivibrio sp. HL-EbGR7] Length = 361 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 114/346 (32%), Positives = 179/346 (51%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R L +P + + + L E L+ + + + D E+ Sbjct: 9 LEGVSERFQELAGLLSEPEVISDNARFRRLSMEYSQLEPVVEAFRRYEGAQADLTAAREM 68 Query: 76 ALEEDDC---SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D E + +R++ Q + D ++ +LE+ AG GG E+ Sbjct: 69 QKDPDPDLRAMAEDEAATAAERLETLELELQKLLIPKDPHDHSNLFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE + ++ E L +GE G K + G AY LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAENQGWQVEILSQSEGEHGGYKEVIARLIGAGAYSRLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS +++ V P D+ EI+ +D R+DTYRASGAGGQHVN TDSA+R+ Sbjct: 189 VPATESQGRIHTSAATVAVMPEPDEVEAPEINPADLRVDTYRASGAGGQHVNKTDSAIRL 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ ERSQHKN+A+A ++L AKL+E E +++ + K+ +G G Sbjct: 249 THLPTGIVVECQDERSQHKNRARAMSLLAAKLFEAEQARQQAEQ--SATRKSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ V+ GDLD ++ + + Sbjct: 307 ERIRTYNF-PQGRITDHRINLTLYKLDAVMAGDLDPVIEPLINEHQ 351 >gi|304322131|ref|YP_003855774.1| hypothetical protein PB2503_12974 [Parvularcula bermudensis HTCC2503] gi|303301033|gb|ADM10632.1| hypothetical protein PB2503_12974 [Parvularcula bermudensis HTCC2503] Length = 315 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 208/309 (67%), Positives = 248/309 (80%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER HL+N I+ + +Q L DNL L E+A E D + + + L +K + E Sbjct: 1 MQERTHLENQIAALTAMQTELDDNLELAEMAEAEGDDAAVDDIQAALADLKDRAGRAELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD+N+A++E+HAGAGGTES DWANML RMY RWA++ K + +E GEEAGI Sbjct: 61 ALLSGEADANNAFVEIHAGAGGTESNDWANMLYRMYVRWAQQHGHKVDIIEEQGGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+L+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSS+WVYP +DD+IEIE++E Sbjct: 121 KSATILVKGINAYGWLKVESGVHRLVRISPYDSNARRHTSFSSVWVYPEIDDNIEIEVAE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCR+DT+RASGAGGQHVNTTDSAVRITH PTG+VVQCQ ERSQHKN+A AWNMLRA+LY Sbjct: 181 SDCRVDTFRASGAGGQHVNTTDSAVRITHEPTGIVVQCQSERSQHKNRATAWNMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+ELQ+REE AN +SKT+IGWG QIRSYVLQPYQMVKDLRT +E SP VLDGDLD Sbjct: 241 EMELQRREEEANAQAASKTDIGWGHQIRSYVLQPYQMVKDLRTGVESPSPDAVLDGDLDA 300 Query: 346 FMKATLAIK 354 FM A LA + Sbjct: 301 FMGAALAQR 309 >gi|326203238|ref|ZP_08193103.1| peptide chain release factor 1 [Clostridium papyrosolvens DSM 2782] gi|325986496|gb|EGD47327.1| peptide chain release factor 1 [Clostridium papyrosolvens DSM 2782] Length = 359 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 122/351 (34%), Positives = 188/351 (53%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD A R ++ K DP + N E K M+E L+ + +E + Sbjct: 1 MFDKLQAAEDRYEEISHKLSDPDVINNQDEYKKYMKEYSDLEEIVQKYREYTKVSKEIEE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKL----EVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 EL + D + Q + + + D + +E+ GAGG Sbjct: 61 ARELLDQTLDKDFREMVQQEFQEAQEKLEVIKRQLKILIVPKDPNDDKNVIVEIRGGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A +L R T++AEK+++K E ++ + E G K I+G AY LK E GV Sbjct: 121 EEAALFAGVLFRAMTKYAEKKRWKYEIMDSNPTELGGFKEVVFSIEGKGAYSRLKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S+ R HTS ++ V P + ++++I+ +D RIDTYRASGAGGQH+N TD Sbjct: 181 HRVQRVPSTESSGRIHTSTITVAVLP-EVEEVDVDINPNDLRIDTYRASGAGGQHINKTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SA+RITH+P+G+VV CQ ERSQHKNK +A +LR+KLYE+ +++ I + + K+++G Sbjct: 240 SAIRITHMPSGIVVSCQDERSQHKNKDRAMKILRSKLYEIAQEQQ--INEVAQDRKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R N+ VLDGDLD+ + A + + Sbjct: 298 TGDRSERIRTYNY-PQGRVTDHRINLTLYKLEQVLDGDLDELIDALITTDQ 347 >gi|170743911|ref|YP_001772566.1| peptide chain release factor 2 [Methylobacterium sp. 4-46] gi|168198185|gb|ACA20132.1| peptide chain release factor 2 [Methylobacterium sp. 4-46] Length = 321 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 212/309 (68%), Positives = 255/309 (82%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MR+R L+ A++ I+ ++ L D L+EL E D + ++E + ++ ++ E +Q E Sbjct: 1 MRDRNDLEEAVASIRRLEQGLEDAATLIELGEMEGDEASIREGEEQIRAVQAEAARRQIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LL+GEAD ND YLEVHAGAGGTESQDWANML RMY RWAE+RK+K + +E +GEEAGI Sbjct: 61 TLLAGEADGNDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKYKVDIVEWSEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K ATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSF+S+WVYPVVDD I IE+ E Sbjct: 121 KGATLLIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVVDDRITIEVKE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYR+SGAGGQHVNTTDSAVRITH+PTG+VV CQQERSQHKN+A AWNMLRA+LY Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVACQQERSQHKNRATAWNMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ELEL+KREE AN +SKT+IGWG QIRSYVLQPYQ+VKDLRT + TSP DVLDGD+D Sbjct: 241 ELELKKREEKANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGTQSTSPDDVLDGDIDP 300 Query: 346 FMKATLAIK 354 F++A+LA + Sbjct: 301 FIEASLAQR 309 >gi|291538249|emb|CBL11360.1| bacterial peptide chain release factor 1 (bRF-1) [Roseburia intestinalis XB6B4] Length = 358 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 121/351 (34%), Positives = 191/351 (54%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ + R L ++ +P + + + + LM+E+ L ++ KE + + Sbjct: 1 MFDKLEDLLIRFEELMSELSEPDVANDPVRFRKLMKEQSDLTPIVNAYKEYKQCKQNIED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L L EE D + + + L K + + L D + +E+ AGAGG Sbjct: 61 SLALLEEESDEEMRELAKEELNDSKARVEELEKELKILLLPKDPNDDKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY +AE R +KTE +E + G+KS T ++ G AY +K E GV Sbjct: 121 DEAALFAAEIYRMYLHYAESRNWKTEIMEADETGIGGMKSVTFMLSGQGAYSVMKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P + ++++I + D RID RASGAGGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMP-EAEEVDVQIDDKDIRIDVCRASGAGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V+ Q E+SQ +NKA+A+ +LR KLY+LE QK E K+++G Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQIQNKAKAFALLRTKLYDLEQQK--AHDAEAELRKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R N+ +++GD+ + + A +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRINLTLYKLDKIMNGDIQEIIDACIAADQ 347 >gi|295134177|ref|YP_003584853.1| peptide chain release factor 2 [Zunongwangia profunda SM-A87] gi|294982192|gb|ADF52657.1| peptide chain release factor 2 [Zunongwangia profunda SM-A87] Length = 365 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 155/351 (44%), Positives = 226/351 (64%), Gaps = 2/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++ +++ L + + + KT DP W N EA+ M+ + ++ Sbjct: 10 ITTRIDNLQVHLNIEQKQIEIQNEEEKTFDPSFWDNPSEAEEFMKTLKGKKKWVNDYNVA 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L + +LLE E + Q+I VE +F+++LS E D A L++ Sbjct: 70 KSGLEELQVLLEFYNEGEAEESD--VIKQYQKILDVVEELEFKNMLSEEGDDLSAVLQIT 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA ML+RMY WAEK+ FK + L +G+ AGIK+ TL I+G A+GWLK Sbjct: 128 AGAGGTESCDWAQMLMRMYLMWAEKQGFKIKELNYQEGDVAGIKTVTLEIEGDYAFGWLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVRISP+DSN++RHTSF+S++VYP+VDD+IEIEI+ +D I T R+SGAGGQ+ Sbjct: 188 GENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIEINPADIEITTARSSGAGGQN 247 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++ V++ H PTG+ + C + RSQH N+ +A ML+++LYE+EL+K+ E E+S Sbjct: 248 VNKVETKVQLVHHPTGIQISCSETRSQHDNRNRAMQMLKSQLYEIELEKQREQREDIEAS 307 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K +I WG QIR+YV+ PY++VKD+RT E + V+DG +D F+KA L + Sbjct: 308 KKKIEWGSQIRNYVMHPYKLVKDVRTAEETGNVDSVMDGHIDQFLKAYLMM 358 >gi|237786018|ref|YP_002906723.1| peptide chain release factor 2 [Corynebacterium kroppenstedtii DSM 44385] gi|237758930|gb|ACR18180.1| peptide chain release factor RF-2 [Corynebacterium kroppenstedtii DSM 44385] Length = 379 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 151/359 (42%), Positives = 219/359 (61%), Gaps = 8/359 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ L + + D D+ ++ L + DP LW + A+ + + H+ I + + Sbjct: 12 LNSTLTTIEKVVDVDDLKDQVRELEAQASDPSLWDDPDHAQQVTSKLSHVQAQIKKVTTL 71 Query: 63 QDRLCDNLILLELALE-------EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + R+ D ++ ELA + + + + ++ E+E + +++LSGE D Sbjct: 72 RQRVDDMPVMYELADDATEAGDTDAADEAREMADSERETLRHEIESLEVQTMLSGEYDER 131 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 +A + + + AGG ++ DWA ML+RMYTRW E+ K + +I EEAGIKSAT ++ G Sbjct: 132 EAVVNIRSAAGGVDAADWAEMLMRMYTRWTEQHGHKIDVFDISYAEEAGIKSATFIVHGD 191 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 YG L EQG HRLVRISP+D+ RR TSF+ + V PVV+ + I+I E+D R+D YR+ Sbjct: 192 YMYGQLSVEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVVEKTDHIDIDENDVRVDVYRS 251 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L AKL + + ++ + Sbjct: 252 SGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLAAKLLDRKREEEQAE 311 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 N + + WG Q+RSYVL PYQMVKDLRTN E PS VLDGDLD F++A + + Sbjct: 312 MNALKGDGSN-SWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDLDGFLEAGIRWR 369 >gi|164687096|ref|ZP_02211124.1| hypothetical protein CLOBAR_00722 [Clostridium bartlettii DSM 16795] gi|164603981|gb|EDQ97446.1| hypothetical protein CLOBAR_00722 [Clostridium bartlettii DSM 16795] Length = 349 Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats. Identities = 155/342 (45%), Positives = 231/342 (67%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 FD + ++ + W + +A+ ++++ L N I+ + + L + IL+ Sbjct: 4 FDIASKQAQIQKYEEEINKQDFWDDNEKAQKILQQNSDLKNIIAEFEGLNSDLEEIEILI 63 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EL LEE+D SI + ++++++ +++ + ++LL+G+ D N+A L ++AG GG ++QD Sbjct: 64 ELGLEEEDESIEHDIEKSIKKLEDKIDEVKIKTLLNGKYDVNNAVLSINAGTGGLDAQDC 123 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A M+LRMY RWA++ FK + L++ EAGIKS TLLI+G NAYG+LK E+GVHR+VRI Sbjct: 124 AQMILRMYLRWADQNNFKVKTLDMISDPEAGIKSVTLLIQGTNAYGYLKSEKGVHRIVRI 183 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+D++ +RHTSF S+ V P +DD I++EI+ +D +IDTYR+SGAGGQHVN TDSAVRIT Sbjct: 184 SPFDASGKRHTSFVSVDVTPELDDKIDVEINPNDLKIDTYRSSGAGGQHVNKTDSAVRIT 243 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIPTG+VVQCQ ERSQ NK A ML+ KL L+ + +E + ++I WG QIR Sbjct: 244 HIPTGIVVQCQNERSQFANKDTAMKMLKGKLIHLKELENKERIEDIQGKYSQITWGSQIR 303 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 SYV QPY++VKD RTN E + V+DG+++ F+ L + K Sbjct: 304 SYVFQPYKLVKDHRTNAEIGNVDSVMDGNINLFINEYLKMNK 345 >gi|298252599|ref|ZP_06976393.1| protein chain release factor B [Gardnerella vaginalis 5-1] gi|297532963|gb|EFH71847.1| protein chain release factor B [Gardnerella vaginalis 5-1] Length = 378 Score = 250 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 141/352 (40%), Positives = 212/352 (60%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + + + D D+ ++ L + +P LW + A+ + + + + ++ + Sbjct: 13 VEAKYSSISKALDVDSLKVTIADLEKQAAEPGLWDDSEHAQQVTSKLSAAQSQLKRLQAV 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 R+ D L+EL EE D + E + L I E++ + ++LL GE D+ A + + Sbjct: 73 DQRIEDTKTLIELGQEEGDADSMSEAQEELGNIAHELDDMEVQTLLDGEYDARSAVVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ D+A MLLRMY RWAE+ +KT+ ++ EEAGIKSAT + P AYG L Sbjct: 133 SGAGGVDAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HR+VRISP+D+ RR T FS++ V P+V+ + I+I +SD R+DT++ASG GGQ Sbjct: 193 VEGGTHRMVRISPFDNQGRRQTGFSAVEVIPLVEATDHIDIPDSDIRVDTFQASGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT SAVRITH+PTG+VV Q ERSQ +N+A A +L+++L L+ + Sbjct: 253 VNTTYSAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLKHAEEAAKKKELAGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD+D F++A + + Sbjct: 313 -IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWR 363 >gi|255654235|ref|ZP_05399644.1| peptide chain release factor 2 [Clostridium difficile QCD-23m63] Length = 339 Score = 250 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 160/329 (48%), Positives = 232/329 (70%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 K W + A+ +++E + L + + ++ L D +L+E+ LEE+D S+ + Sbjct: 9 EEKMNKQDFWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEEDDSVER 68 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 + +++ ++ ++ + ++LL+GE D N+A L ++AG GG ++QDWA MLLRMY RW+E Sbjct: 69 DIEKSIESMEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSE 128 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + +K + L+I EAGIK+AT+L++G NAYG+LK E+GVHRLVRISP+D + +RHTSF Sbjct: 129 SKGYKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSF 188 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +SI V P +D++IE+EI+ SD +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ E Sbjct: 189 ASIDVTPELDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNE 248 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQH NK +A +L AKL EL+ +++E + ++I WG QIRSYV QPY++VKD Sbjct: 249 RSQHLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWGSQIRSYVFQPYKLVKDH 308 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 RTN E + V++G++D F+ L + K Sbjct: 309 RTNAEFGNVDSVMNGNIDLFINEYLKMNK 337 >gi|168215798|ref|ZP_02641423.1| peptide chain release factor 2 [Clostridium perfringens NCTC 8239] gi|182382266|gb|EDT79745.1| peptide chain release factor 2 [Clostridium perfringens NCTC 8239] Length = 323 Score = 250 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 151/322 (46%), Positives = 216/322 (67%), Gaps = 1/322 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++ W +V +A+ + +E + + + I K + +R+ D +L EL E D+ + + Sbjct: 1 MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKELMEENDEETAQE-II 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + E++ + E++LSGE D NDA L +H G GG+++ DW MLLRMYTRW EK+ Sbjct: 60 SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + E ++ G+EAG+KS TL +KG AYG+LK E+G+HRLVRISP+++N +R TSF+S+ Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + +IEI+ D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ Sbjct: 180 EVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 N+ A ML++KL EL+ + +E ++GWG QIRSYV PY MVKD RTN Sbjct: 240 FSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRTN 299 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E ++ + V+DGD+D+F+ A L Sbjct: 300 FETSNVNGVMDGDIDNFIIAYL 321 >gi|290580262|ref|YP_003484654.1| putative peptide chain release factor [Streptococcus mutans NN2025] gi|254997161|dbj|BAH87762.1| putative peptide chain release factor [Streptococcus mutans NN2025] Length = 325 Score = 250 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 145/325 (44%), Positives = 209/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L +Q+ + +L E+ E+D + E Sbjct: 1 MTEPDFWDDNIAAQKTSQELNELKLKYETFNSMQELSDETELLQEMLEEDDS--LQGELE 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++L ++ + + LLS D+N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 59 EDLVKLDKIMTSYEMTLLLSEPYDANNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK + L+ G+EAGIKS L +GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVDVLDYQAGDEAGIKSVALSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIP+G+VV +R+Q Sbjct: 179 EVMPELDDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVVASTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E +K+ + + + K EI WG QIRSYV PY MVKD RTN Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG+LD F+ A L + Sbjct: 299 YEVSQVDRVMDGELDGFIDAFLKWR 323 >gi|255323494|ref|ZP_05364625.1| peptide chain release factor 2 [Campylobacter showae RM3277] gi|255299531|gb|EET78817.1| peptide chain release factor 2 [Campylobacter showae RM3277] Length = 366 Score = 250 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 166/353 (47%), Positives = 228/353 (64%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ ++ + G+ ++ RL + D + WQ++ +A + +E+ + N ++ Sbjct: 13 LNTKVENIAGVVKPESIKARLKEIEEMENDQNFWQDIAKAGAIGKEKTKISNILNNFLNA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + D L ELA E+D + ++ ++ + LLSGE D +A + +H Sbjct: 73 KSAVDDAKELYELANSENDEETINSLFAEADELEDKIVNLEISMLLSGEDDGKNAIVTIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA+ML RMY R+ E+ FK E L+ +GEEAG+K + ++KG NAYG+LK Sbjct: 133 PGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFIVKGVNAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSF+S+ V P +DD IEIEI E D +IDTYRA GAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFTSVMVSPEIDDDIEIEIDEKDLKIDTYRAGGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML+++LYELEL K++E A E Sbjct: 253 VNKTESAVRITHAPTGIVVQCQNDRSQHKNKATAMKMLKSRLYELELMKQQEAAGSIE-- 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+ + +LDGD+ ++ L +K Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAYSQTDAILDGDIKKLIEGVLVSQK 363 >gi|229817216|ref|ZP_04447498.1| hypothetical protein BIFANG_02476 [Bifidobacterium angulatum DSM 20098] gi|229785005|gb|EEP21119.1| hypothetical protein BIFANG_02476 [Bifidobacterium angulatum DSM 20098] Length = 373 Score = 250 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 140/351 (39%), Positives = 209/351 (59%), Gaps = 1/351 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + + D D +++ L + +P LW + A+ + + + + Sbjct: 14 RAKYGSIAEALDMDRLKAQIAELEQQAAEPGLWDDPENAQKVTSRLSAAQSQLKRLNSAS 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 R+ D L+EL EE+D L E + +++I+ +++ + ++LL GE D A + + + Sbjct: 74 QRIDDVETLVELGQEEEDADTLAEAQEEVKKIQSDLDDMEIQTLLDGEYDERSAVVTIRS 133 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGG ++ D+A MLLRMY R+ E+ FK + ++ EEAGIKSAT + P AYG L Sbjct: 134 GAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSV 193 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G HRLVRISP+D+ RR TSF+++ V P+V+ + I+I +SD R+DTY +SG GGQ V Sbjct: 194 EGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDSDIRVDTYCSSGPGGQGV 253 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTT SAVRITH+PTG+VV Q ERSQ +N+A A +L+++L L ++ + Sbjct: 254 NTTYSAVRITHLPTGLVVTMQDERSQIQNRAAAMAVLQSRLLVLRHEEEAKKKKELAGD- 312 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGDLD F++A + + Sbjct: 313 IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDLDGFIQAGIRWR 363 >gi|219684785|ref|ZP_03539727.1| peptide chain release factor 2 [Borrelia garinii PBr] gi|219671730|gb|EED28785.1| peptide chain release factor 2 [Borrelia garinii PBr] Length = 350 Score = 250 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 148/347 (42%), Positives = 214/347 (61%), Gaps = 4/347 (1%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG FD ++ + + W + A+ +++ + L N I +E+ +++ Sbjct: 5 KAFGGSFDKKEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIK 64 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L ++ + ++ + + S E D N+A+L +H+GAGG Sbjct: 65 DLSDL---CEIVENEKDINSLEIEFNVLEKQYKDLLTISYFKEELDINNAFLTIHSGAGG 121 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DW ML RMY+R+AE++K+KTE +++ + E GIKS T+ IKG AYG LK E G+ Sbjct: 122 TEACDWVTMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGI 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRL+RISP+D+ +RHTSF+S++V PV+D+ IEI I D RIDTYRASGAGGQHVN T Sbjct: 181 HRLIRISPFDAAKKRHTSFASVFVDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHVNKTS 240 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHI TG+V Q Q +RSQHKNK A +L+++LYE K ++ + K EI Sbjct: 241 SAVRITHIETGIVTQSQSDRSQHKNKDMAMKVLKSRLYEYYKNKEDKKNKSKQELKKEIS 300 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYV QPY +VKD RT E ++ + V+DG++D+F++ L K Sbjct: 301 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 347 >gi|323135929|ref|ZP_08071012.1| peptide chain release factor 2 [Methylocystis sp. ATCC 49242] gi|322399020|gb|EFY01539.1| peptide chain release factor 2 [Methylocystis sp. ATCC 49242] Length = 322 Score = 250 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 203/309 (65%), Positives = 247/309 (79%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRER L+ + I ++ L D L L+EL E D +E + L+ + + + +Q E Sbjct: 1 MRERTQLEEQMGAIDKLSRDLEDALTLVELGEEAGDEDTEKEGVEALKAVLKDAQRRQIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +L SGEAD ND ++E+H+GAGGTESQDWA ML RMY RWAE++KFK E +E GEEAGI Sbjct: 61 ALFSGEADGNDTFIEIHSGAGGTESQDWARMLFRMYARWAERKKFKVEVIEETAGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KS TLL+KG NA+GW K E GVHRLVRISP+DSN+RRHTSF+S+WVYPVVDD IE+ I+E Sbjct: 121 KSGTLLVKGHNAHGWAKTESGVHRLVRISPFDSNARRHTSFASVWVYPVVDDRIEVNINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYR+SGAGGQHVNTTDSA+RITHIPTG+VV CQ ERSQHKN+A AWNMLRA+LY Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAIRITHIPTGIVVACQAERSQHKNRATAWNMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ELEL+KRE AN +SKT+IGWG QIRSYVLQPYQ+VKDLRT + +PS+VLDG+LDD Sbjct: 241 ELELEKREAEANKAAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVTSGTPSEVLDGELDD 300 Query: 346 FMKATLAIK 354 FM+A+LA + Sbjct: 301 FMQASLAQR 309 >gi|240147055|ref|ZP_04745656.1| peptide chain release factor 1 [Roseburia intestinalis L1-82] gi|257200778|gb|EEU99062.1| peptide chain release factor 1 [Roseburia intestinalis L1-82] gi|291535754|emb|CBL08866.1| bacterial peptide chain release factor 1 (bRF-1) [Roseburia intestinalis M50/1] Length = 357 Score = 250 bits (637), Expect = 3e-64, Method: Composition-based stats. Identities = 121/351 (34%), Positives = 191/351 (54%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ + R L ++ +P + + + + LM+E+ L ++ KE + + Sbjct: 1 MFDKLEDLLIRFEELMSELSEPDVANDPVRFRKLMKEQSDLTPIVNAYKEYKQCKQNIED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L L EE D + + + L K + + L D + +E+ AGAGG Sbjct: 61 SLALLEEESDEEMRELAKEELNDSKARVEELEKELKILLLPKDPNDDKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY +AE R +KTE +E + G+KS T ++ G AY +K E GV Sbjct: 121 DEAALFAAEIYRMYLHYAESRNWKTEIMEADETGIGGMKSVTFMLSGQGAYSVMKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P + ++++I + D RID RASGAGGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMP-EAEEVDVQIDDKDIRIDVCRASGAGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V+ Q E+SQ +NKA+A+ +LR KLY+LE QK E K+++G Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQIQNKAKAFALLRTKLYDLEQQK--AHDAEAELRKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R N+ +++GD+ + + A +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRINLTLYKLDKIMNGDIQEIIDACIAADQ 347 >gi|42562784|ref|NP_176032.2| peptide chain release factor, putative [Arabidopsis thaliana] gi|332195261|gb|AEE33382.1| Peptide chain release factor 2 [Arabidopsis thaliana] Length = 482 Score = 250 bits (637), Expect = 4e-64, Method: Composition-based stats. Identities = 158/351 (45%), Positives = 222/351 (63%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +++ + + W + RL L+ + LW + A + RE L + + Sbjct: 122 IAQSIQVIKRRLQWKKLLVRLKVLSAELNKSDLWDDPTHAGKISREHGSLTGKMKGVMTF 181 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L +++ +L+LA EE+D + ET L ++ + K+ E+LLS + D Y+EV Sbjct: 182 ERELLEHIDMLKLAKEENDSELESETLKALIDMRRVSKEKELEALLSADNDPCSCYIEVQ 241 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA M++ MY WA++RKF ++ GE AGIK AT+ + G AYG+ K Sbjct: 242 AGAGGTESNDWAAMVMEMYKTWAQRRKFSVTVVDEAPGEIAGIKRATIKVNGEYAYGYAK 301 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVRISP+DS RRHTSF+++ V P+ D S +EI++SD RI+ +R+ GAGGQ Sbjct: 302 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGSTRVEINDSDLRIERFRSGGAGGQ 361 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H NTTDSAVRI HIPTG+ CQ ERSQH NKA A +L+++L +LE+ ++ + Sbjct: 362 HANTTDSAVRIVHIPTGITATCQNERSQHSNKASAMAVLQSRLDQLEMARQTAMNAQHTQ 421 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 S TEI WG QIR+YVL PY+MVKDLRTN E + P VL+GDLD F+ + L+ Sbjct: 422 SLTEISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSFLS 472 >gi|169347339|ref|ZP_02866277.1| hypothetical protein CLOSPI_00054 [Clostridium spiroforme DSM 1552] gi|169293956|gb|EDS76089.1| hypothetical protein CLOSPI_00054 [Clostridium spiroforme DSM 1552] Length = 367 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 158/346 (45%), Positives = 219/346 (63%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + D ++ + + L TE + W + +AK+ + + + + L Sbjct: 17 IEEFYRSIDIESYRREIEGLTIVTEQDNFWDDTNKAKITYDKLNKMKKIVDQYDVLATTL 76 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 + EL ++ L+ + + + +++ + LLSGE D+ +A +E+H GAG Sbjct: 77 NNLDETYELVKSSEEVEFLEILESDYLKFQEDLDKFEKMMLLSGEHDNLNAIVEIHPGAG 136 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTESQDWA ML RMY R+A ++ +K E L+ DG+ AGIKS T+LIKG + YG LK E+G Sbjct: 137 GTESQDWAEMLFRMYQRYASRKDWKVEVLDYLDGDVAGIKSVTMLIKGEDVYGHLKAEKG 196 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR+SP+DS RRHTSF+S+ V P ++ IEI+I D +IDTYRASGAGGQH+N T Sbjct: 197 VHRLVRLSPFDSAKRRHTSFASVDVMPEFNNEIEIDIKNEDLKIDTYRASGAGGQHINKT 256 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIPT +VV CQ +RSQ KN+ QA ML++KLY+L L+K+ + + EI Sbjct: 257 DSAVRITHIPTNIVVTCQSQRSQIKNREQAMIMLKSKLYQLMLEKQASELKELKGEQKEI 316 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL PY +VKD R+N E ++P VLDGDLD F+ A L Sbjct: 317 AWGSQIRSYVLHPYSLVKDNRSNYESSNPKAVLDGDLDGFIYAYLK 362 >gi|319935038|ref|ZP_08009481.1| peptide chain release factor 2 [Coprobacillus sp. 29_1] gi|319810056|gb|EFW06425.1| peptide chain release factor 2 [Coprobacillus sp. 29_1] Length = 371 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 162/347 (46%), Positives = 218/347 (62%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 LN L D + + + L +T D H W N +AK + + + ++ L Sbjct: 17 LNELFVSIDIEGLKREIEGLTVQTLDEHFWNNQEQAKKIYNQLNEMKKTTDTYDDLVSSL 76 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D + E +D + + + + + + L SGE D ++A +E+H GAG Sbjct: 77 NDLDETYDYVKETEDTDFKEALDQDYELFEKHLNDFEKTLLFSGEYDHHNAIVEIHPGAG 136 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTESQDWA ML+RMY R+ +K+ FK E L+ DGEEAG+KS TL G NAYG LK E+G Sbjct: 137 GTESQDWAAMLMRMYQRYGDKKDFKVEVLDYLDGEEAGLKSVTLRFIGYNAYGHLKAEKG 196 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+DS+ RRHTSF+S+ V P D+ IEIEI ++D RIDTYRASGAGGQH+N T Sbjct: 197 VHRLVRISPFDSSKRRHTSFASVDVMPEFDNDIEIEIDQNDLRIDTYRASGAGGQHINKT 256 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSA+RITHIPT +VV CQ +RSQ +N+ QA ML++KLY++ L+++ + + + I Sbjct: 257 DSAIRITHIPTHIVVTCQSQRSQIQNREQALIMLKSKLYQVMLEEQASKLSDIKGEQKAI 316 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYVL PY MVKD R+ E +P +LDGDLDD + A L Sbjct: 317 EWGSQIRSYVLHPYSMVKDNRSGYESNNPKAILDGDLDDCIYAYLKA 363 >gi|295105719|emb|CBL03262.1| peptide chain release factor 2 [Gordonibacter pamelaeae 7-10-1-b] Length = 363 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 145/352 (41%), Positives = 210/352 (59%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++ ++ G D+ L+ L+ + P W + A+ + ++ +L I E Sbjct: 11 MAARVTDAHGFLHIDDKTAELAKLDEEIAAPGFWDDAAHAQGVSKQASNLRETIREYDEA 70 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D LELA E++ + + + L+ + S S D DA L V+ Sbjct: 71 AALLEDARAALELAGEDEAFAAEADDALARLSDLLDAL--EITSWFSERFDGGDAILTVN 128 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 G+GG E+QDW +ML RMY R+AEK+ +K L++ GE G+ AT+ I+G NA+G LK Sbjct: 129 PGSGGLEAQDWTDMLYRMYVRYAEKKDWKVTILDVVPGEGIGLDKATIQIEGRNAFGMLK 188 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP D RRHT+F+ + V PV+ D IE++++ +D R+D YR+SG GGQ Sbjct: 189 SENGVHRLVRISPTDDKKRRHTTFAGVEVLPVLPDDIEVDLNPADVRVDVYRSSGPGGQC 248 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPT +VV CQ E+SQ +NK A+ +L+AKLYE E QKR + Sbjct: 249 VNTTDSAVRLTHIPTNIVVTCQNEKSQLQNKEAAFRVLKAKLYEREEQKRAQELAELRGD 308 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + + +G QIR+YVL PYQMVKD+R+ +E + VLDGDL++F+ + Sbjct: 309 RMDNTFGSQIRNYVLYPYQMVKDVRSGVETGNVDAVLDGDLEEFVIGYHKWR 360 >gi|291295687|ref|YP_003507085.1| LigA [Meiothermus ruber DSM 1279] gi|290470646|gb|ADD28065.1| LigA [Meiothermus ruber DSM 1279] Length = 365 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 143/352 (40%), Positives = 203/352 (57%), Gaps = 5/352 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L L G D RL L+ + DP LW + A+ + +E L A+ + + Sbjct: 6 LEHRLEALRGYLDIAGKEARLKELDRQINDPSLWNDPAHARKISQEAARLRKAVEGYRRL 65 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L L L E+ + E + ++ ++LL N A + + Sbjct: 66 ESDLQGLLELWPELSPEEREQMQPELERAGRELEELYH----QTLLGFPYAENAAIVTIK 121 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTE+ DWA ML RMYTR+AE++ F E +++ G EAGI A +++G NAYG L Sbjct: 122 PGAGGTEACDWAQMLYRMYTRFAERKGFSLELVDLEPGAEAGIDQAQFIVRGENAYGLLS 181 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+++ +R TSF+++ V P VD+S++I+I+ D RID R+ G GGQ Sbjct: 182 AEAGVHRLVRPSPFNAQGKRQTSFAAVEVMPEVDESVDIQIAPEDLRIDVMRSQGKGGQG 241 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+ H+PTG+ V+CQ RSQ KNK A N+LR+KL+E+E +K++E + Sbjct: 242 VNTTDSAVRVVHLPTGIFVKCQVTRSQQKNKEMALNILRSKLFEIEWKKKQEELARLKGE 301 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 I WG QIRSYVL +KD RT + P +VLDGDL+ + A L K Sbjct: 302 SRPIEWGSQIRSYVLDKQ-YIKDHRTGEMRHDPENVLDGDLESLIWAGLEWK 352 >gi|126697716|ref|YP_001086613.1| peptide chain release factor 2 [Clostridium difficile 630] gi|115249153|emb|CAJ66964.1| Peptide chain release factor 2 (RF-2) [Clostridium difficile] Length = 328 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 160/326 (49%), Positives = 231/326 (70%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 W + A+ +++E + L + + ++ L D +L+E+ LEEDD S+ ++ Sbjct: 1 MNQQDFWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEDDDSVERDIE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +++ ++ ++ + ++LL+GE D N+A L ++AG GG ++QDWA MLLRMY RW+E + Sbjct: 61 KSIESMEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSESKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K + L+I EAGIK+AT+L++G NAYG+LK E+GVHRLVRISP+D + +RHTSF+SI Sbjct: 121 YKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSFASI 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D++IE+EI+ SD +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ ERSQ Sbjct: 181 DVTPELDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK +A +L AKL EL+ +++E + ++I WG QIRSYV QPY++VKD RTN Sbjct: 241 HLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWGSQIRSYVFQPYKLVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355 E + V++G++D F+ L + K Sbjct: 301 AEFGNVDSVMNGNIDLFINEYLKMNK 326 >gi|308235215|ref|ZP_07665952.1| peptide chain release factor 2 [Gardnerella vaginalis ATCC 14018] gi|311114816|ref|YP_003986037.1| peptide chain release factor RF2 [Gardnerella vaginalis ATCC 14019] gi|310946310|gb|ADP39014.1| peptide chain release factor RF2 [Gardnerella vaginalis ATCC 14019] Length = 380 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 140/352 (39%), Positives = 214/352 (60%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + + + D ++ ++ L + +P LW + A+ + + + + ++ + Sbjct: 13 VEAKYSLISKALDVNSLKTAIADLEKQASEPGLWDDSDHAQQVTSKLSAAQSQLKRLQAV 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D L+EL EE+D + E + L I E++ + ++LL GE D+ A + + Sbjct: 73 EQRIEDTKTLIELGQEEEDADSMSEAQEELGSIAHELDDMEVQTLLDGEYDARAAVVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ D+A MLLRMY RWAE+ +KT+ ++ EEAGIKSAT + P AYG L Sbjct: 133 SGAGGVDAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HR+VRISP+D+ RR T FS++ V P+V+ + I+I +SD R+DT++ASG GGQ Sbjct: 193 VEGGTHRMVRISPFDNQGRRQTGFSAVEVIPLVEATDHIDIPDSDIRVDTFQASGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT SAVRITH+PTG+VV Q ERSQ +N+A A +L+++L L+ + Sbjct: 253 VNTTYSAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLKHAEEAAKKKELAGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD+D F++A + + Sbjct: 313 -IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWR 363 >gi|296118845|ref|ZP_06837421.1| peptide chain release factor 2 [Corynebacterium ammoniagenes DSM 20306] gi|295968334|gb|EFG81583.1| peptide chain release factor 2 [Corynebacterium ammoniagenes DSM 20306] Length = 367 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 152/352 (43%), Positives = 215/352 (61%), Gaps = 4/352 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS L + + D +R+ L + DP LW + A+ + E + + + Sbjct: 12 LSATLTTIEKVMDPRAMEERVRELEAQAGDPSLWDDPDHAQKVTSELSSTQAKLRKLSAL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D ++ EL ++ D L ++ VE + ++LSG+ D +A + + Sbjct: 72 RGRLEDLPVMYEL---AEEEGDASLADDELDAVRDAVETLEVTTMLSGDYDQREAVINIR 128 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ DWA ML+RMYTRWAEK K + +I EEAGIKSAT ++ G YG L Sbjct: 129 SGAGGVDAADWAEMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGTLS 188 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVR+SP+D+ +RR TSF+ + V PVV+ + IEI +S+ R+D YR+SG GGQ Sbjct: 189 VEQGAHRLVRLSPFDNQNRRQTSFAEVEVLPVVEQTDSIEIPDSEVRVDVYRSSGPGGQS 248 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG++V CQ E+SQ +NKA A +L+AKL E + Q+ + + Sbjct: 249 VNTTDSAVRLTHVPTGIMVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAEMDALGAG 308 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG Q+RSYVL PYQMVKDLRTN E PS VL GD+DDF++A + + Sbjct: 309 -GNASWGNQMRSYVLHPYQMVKDLRTNHEVGDPSKVLGGDIDDFLEAGIRWR 359 >gi|227546362|ref|ZP_03976411.1| peptide chain release factor 2 [Bifidobacterium longum subsp. infantis ATCC 55813] gi|317482557|ref|ZP_07941572.1| peptide chain release factor 2 [Bifidobacterium sp. 12_1_47BFAA] gi|227213343|gb|EEI81215.1| peptide chain release factor 2 [Bifidobacterium longum subsp. infantis ATCC 55813] gi|316915979|gb|EFV37386.1| peptide chain release factor 2 [Bifidobacterium sp. 12_1_47BFAA] Length = 374 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 138/353 (39%), Positives = 205/353 (58%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + D D + L T+ P LW + A+ + ++ + + Sbjct: 12 EARAKYESIAKALDVDRLKADIKDLETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNS 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 R+ D L+EL EE D L E + I+ +++ + ++LL GE D A + + Sbjct: 72 ASQRIDDVETLVELGHEEGDQDSLDEAQGEIGEIQKDLDQMEIQTLLDGEYDERSAVVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A MLLRMY R+ E+ FK + ++ EEAGIKSAT + P AYG L Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+V+ + I+I ++D R+DTY +SG GGQ Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTT SAVRITH+PTG+VV Q ERSQ +N+A A +L+++L L ++ + Sbjct: 252 GVNTTYSAVRITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVLRHEEEAKKKKELAG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD++ F++A + + Sbjct: 312 D-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINAFIEAGIRWR 363 >gi|168205594|ref|ZP_02631599.1| peptide chain release factor 2 [Clostridium perfringens E str. JGS1987] gi|169344216|ref|ZP_02865198.1| peptide chain release factor 2 [Clostridium perfringens C str. JGS1495] gi|169297675|gb|EDS79775.1| peptide chain release factor 2 [Clostridium perfringens C str. JGS1495] gi|170662903|gb|EDT15586.1| peptide chain release factor 2 [Clostridium perfringens E str. JGS1987] Length = 323 Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats. Identities = 151/322 (46%), Positives = 217/322 (67%), Gaps = 1/322 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++ W +V +A+ + +E + + + I K + +R+ D +L EL E D+ + + Sbjct: 1 MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKELMEENDEETAKE-II 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + E++ + E++LSGE D NDA L +H G GG+++ DW MLLRMYTRW EK+ Sbjct: 60 SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + E ++ G+EAG+KS TL +KG AYG+LK E+G+HRLVRISP+++N +R TSF+S+ Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + +IEI+ D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ Sbjct: 180 EVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 N+ A ML++KL EL+ + +E ++GWG QIRSYV PY MVKD RTN Sbjct: 240 FSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRTN 299 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 +E ++ + V+DGD+D+F+ A L Sbjct: 300 VETSNVNGVMDGDIDNFIIAYL 321 >gi|168213727|ref|ZP_02639352.1| peptide chain release factor 2 [Clostridium perfringens CPE str. F4969] gi|170714817|gb|EDT26999.1| peptide chain release factor 2 [Clostridium perfringens CPE str. F4969] Length = 323 Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats. Identities = 151/322 (46%), Positives = 218/322 (67%), Gaps = 1/322 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++ W +V +A+ + +E + + + I K + +R+ D +L EL E D+ + + Sbjct: 1 MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKELMEENDEETAKE-II 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + ++ + E++ + E++LSGE D NDA L +H G GG+++ DW MLLRMYTRW EK+ Sbjct: 60 NEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + E ++ G+EAG+KS TL +KG AYG+LK E+G+HRLVRISP+++N +R TSF+S+ Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + +IEI+ D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ Sbjct: 180 EVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 N+ A ML++KL EL+ + +E ++GWG QIRSYV PY MVKD RTN Sbjct: 240 FSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRTN 299 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 +E ++ + V+DGD+D+F+ A L Sbjct: 300 VETSNVNGVMDGDIDNFIIAYL 321 >gi|312199813|ref|YP_004019874.1| peptide chain release factor 2 [Frankia sp. EuI1c] gi|311231149|gb|ADP84004.1| peptide chain release factor 2 [Frankia sp. EuI1c] Length = 367 Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats. Identities = 152/353 (43%), Positives = 223/353 (63%), Gaps = 4/353 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D + +R + L + DP LW + A+++ R+ + IS ++ + Sbjct: 12 LDSTLTGIETVLDVEGLRRRAADLEQEASDPDLWSDQDRAQVVTRKLSSVRGDISRVEGL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 +DRL + + EL +D ++ E + L + ++ + +LLSGE D DA +++ Sbjct: 72 RDRLDNIMTAFEL----EDDDLISEATGQLPTLARDISTLEVRTLLSGEYDERDAIVQLS 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ DW MLLRMY RWAE+ + TE + + EEAG+KSAT L+K P AYG L+ Sbjct: 128 AGAGGVDAADWTAMLLRMYLRWAERHGYSTEVYDSSEAEEAGLKSATFLVKAPYAYGTLR 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+ +RR TSF+ + + PVV+ S ++I + D R+D +R+SG GGQ Sbjct: 188 SEHGVHRLVRISPFDNQNRRQTSFAGVEITPVVELSDHVDIDDKDLRVDIFRSSGPGGQG 247 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A +L+AKL E + Sbjct: 248 VNTTDSAVRITHLPTGIVVTCQNERSQLQNKAAAMVVLQAKLLERRRAEEAAEKQRLTGG 307 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 ++ +G QIR+YVL PYQMVKDLRT +E ++ VLDG++DDF+ A + ++ Sbjct: 308 PQDVSFGSQIRNYVLHPYQMVKDLRTEVETSNTGGVLDGEIDDFIDAEVRWRR 360 >gi|23465750|ref|NP_696353.1| peptide chain release factor 2 [Bifidobacterium longum NCC2705] gi|189439805|ref|YP_001954886.1| peptide chain release factor 2 [Bifidobacterium longum DJO10A] gi|239622364|ref|ZP_04665395.1| peptide chain release factor 2 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|296453666|ref|YP_003660809.1| peptide chain release factor 2 [Bifidobacterium longum subsp. longum JDM301] gi|312133211|ref|YP_004000550.1| prfb [Bifidobacterium longum subsp. longum BBMN68] gi|322690619|ref|YP_004220189.1| peptide chain release factor [Bifidobacterium longum subsp. longum JCM 1217] gi|23326435|gb|AAN24989.1| peptide chain release factor 2 [Bifidobacterium longum NCC2705] gi|189428240|gb|ACD98388.1| Protein chain release factor B [Bifidobacterium longum DJO10A] gi|239514361|gb|EEQ54228.1| peptide chain release factor 2 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|291517272|emb|CBK70888.1| bacterial peptide chain release factor 2 (bRF-2) [Bifidobacterium longum subsp. longum F8] gi|296183097|gb|ADG99978.1| peptide chain release factor 2 [Bifidobacterium longum subsp. longum JDM301] gi|311772412|gb|ADQ01900.1| PrfB [Bifidobacterium longum subsp. longum BBMN68] gi|320455475|dbj|BAJ66097.1| peptide chain release factor [Bifidobacterium longum subsp. longum JCM 1217] Length = 374 Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats. Identities = 138/353 (39%), Positives = 205/353 (58%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + D D + L T+ P LW + A+ + ++ + + Sbjct: 12 EARAKYESIAKALDVDRLKADIKDLETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNS 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 R+ D L+EL EE D L E + I+ +++ + ++LL GE D A + + Sbjct: 72 ASQRIDDVETLVELGHEEGDQDSLDEAQSEIGEIQKDLDQMEIQTLLDGEYDERSAVVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A MLLRMY R+ E+ FK + ++ EEAGIKSAT + P AYG L Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+V+ + I+I ++D R+DTY +SG GGQ Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTT SAVRITH+PTG+VV Q ERSQ +N+A A +L+++L L ++ + Sbjct: 252 GVNTTYSAVRITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVLRHEEEAKKKKELAG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD++ F++A + + Sbjct: 312 D-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINAFIEAGIRWR 363 >gi|172039100|ref|YP_001805601.1| peptide chain release factor 2 [Cyanothece sp. ATCC 51142] gi|171700554|gb|ACB53535.1| peptide chain release factor 2 [Cyanothece sp. ATCC 51142] Length = 358 Score = 249 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 145/345 (42%), Positives = 214/345 (62%), Gaps = 1/345 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 FD + L P W + A+ ++E L + + + +L D Sbjct: 9 RTTFDLPALKAAIKNLENTAAQPQFWDDPETAQTTLQELNDLKSQLEQYQRWCHQLEDTK 68 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + EL EDD ++ QE +N+ ++ ++ + + LLSG D+ A L ++AGAGGT++ Sbjct: 69 AIAELLELEDDTTLRQEAQENITQLNHNLDRWELQQLLSGIYDTKGAILTINAGAGGTDA 128 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRW E++ +K + E+ +G+EAGIKSATL I+G A+G+LKGE+G HRL Sbjct: 129 QDWAQMLLRMYTRWGEQQGYKVDLTELSEGDEAGIKSATLEIEGRYAFGYLKGEKGTHRL 188 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSI-EIEISESDCRIDTYRASGAGGQHVNTTDSA 249 VRISP+++N +R TSF+ + V P +++ ++EI + D I T R+ G GGQ+VN ++A Sbjct: 189 VRISPFNANGKRQTSFAGVEVMPALEEDDLKVEIPDKDLEISTSRSGGKGGQNVNKVETA 248 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+ HIPTG+ V+C QERSQ +NK +A +L+AKL + ++R + + WG Sbjct: 249 VRVVHIPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQEIAEIRGDMVDAAWG 308 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QIR+YV PYQMVKDLRTNIE T + V+DG LD F++A L Sbjct: 309 NQIRNYVFHPYQMVKDLRTNIETTDITGVMDGYLDPFIEAYLRYD 353 >gi|268679078|ref|YP_003303509.1| peptide chain release factor 2 [Sulfurospirillum deleyianum DSM 6946] gi|268617109|gb|ACZ11474.1| peptide chain release factor 2 [Sulfurospirillum deleyianum DSM 6946] Length = 364 Score = 249 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 167/354 (47%), Positives = 246/354 (69%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL+ +++ + + + +RL + +DP W + A + +E+ L++ ++ + Sbjct: 12 KLTTKVDNIAQIIKPEEIAKRLGEIEAIEQDPEFWNDAKRAAEMQKEKTALNSLLNRYTK 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ + D + L E+A E+D + ++E ++ QR++ + + +LSGE D+ +A + + Sbjct: 72 AKNVVSDAVDLYEMANAENDETTIEELFNDAQRVEDHITNLEIAMMLSGENDTKNAIVSI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA++L RMY RWAE+ FK E L+ +GEEAGIK + +I G NAYG+L Sbjct: 132 HPGAGGTESQDWASILYRMYLRWAERSGFKVEVLDYQEGEEAGIKDVSFIISGENAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HRLVRISP+D+N++RHTSFSS+ V P VDD I+I + + D ++DTYRASGAGGQ Sbjct: 192 KVENGIHRLVRISPFDANAKRHTSFSSVMVSPEVDDDIDIVLEDRDLKVDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSA+RITH+PTG+VVQCQ +RSQHKN+A A ML+++LYELEL+K++ + E Sbjct: 252 HVNKTDSAIRITHMPTGIVVQCQNDRSQHKNRASAMKMLKSRLYELELEKQQAEKDGIE- 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+NI + + +LDGD+ ++ L +K Sbjct: 311 -KSEIGWGHQIRSYVLAPYQQVKDNRSNIAYSQVNAILDGDISKVIEDVLIAQK 363 >gi|110634059|ref|YP_674267.1| peptide chain release factor 2 [Mesorhizobium sp. BNC1] gi|110285043|gb|ABG63102.1| bacterial peptide chain release factor 2 (bRF-2) [Chelativorans sp. BNC1] Length = 322 Score = 249 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 220/309 (71%), Positives = 260/309 (84%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ L+ I+ I + L DN+ L++L EE D I++E ++ ++ E+ +Q E Sbjct: 1 MRERQSLEENINAINGLSRSLDDNVELIKLGEEEGDAGIVEEAESAIRSLRGEISARQIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD+ND YLEVHAGAGGTESQDWA MLLRMYTRWAE+R K E LE+HDGEEAGI Sbjct: 61 TLLSGEADANDTYLEVHAGAGGTESQDWALMLLRMYTRWAERRGMKVETLEVHDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+L+ G NAYGWLK E GVHRLVRISP+DSN+RRHTSF+SIWVYPV+DDSIEIEI E Sbjct: 121 KSATILVHGHNAYGWLKTESGVHRLVRISPFDSNARRHTSFASIWVYPVIDDSIEIEIPE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 S+ RIDTYR+SGAGGQHVNTTDSAVRITHIPTG+ V CQQERSQHKN+A+AW MLRA+LY Sbjct: 181 SEVRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIAVACQQERSQHKNRAKAWEMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ELEL+KREE AN E+SK++IGWG QIRSYVLQPYQ+VKDLRT +E SP DVLDGDLD+ Sbjct: 241 ELELKKREEAANATEASKSDIGWGHQIRSYVLQPYQLVKDLRTGVESPSPQDVLDGDLDE 300 Query: 346 FMKATLAIK 354 FMKA+L+ + Sbjct: 301 FMKASLSQR 309 >gi|168210100|ref|ZP_02635725.1| peptide chain release factor 2 [Clostridium perfringens B str. ATCC 3626] gi|170711768|gb|EDT23950.1| peptide chain release factor 2 [Clostridium perfringens B str. ATCC 3626] Length = 323 Score = 249 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 150/322 (46%), Positives = 216/322 (67%), Gaps = 1/322 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++ W +V +A+ + +E + + + I K + +R+ D +L EL E D+ + + Sbjct: 1 MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKELMEENDEETAKE-II 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + E++ + E++LSGE D NDA L +H G GG+++ DW MLLRMY RW EK+ Sbjct: 60 SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYIRWCEKKG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + E ++ G+EAG+KS TL +KG AYG+LK E+G+HRLVRISP+++N +R TSF+S+ Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + +IEI+ D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ Sbjct: 180 EVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 N+ A ML++KL EL+ + +E ++GWG QIRSYV PY MVKD RTN Sbjct: 240 FSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRTN 299 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 +E ++ + V+DGD+D+F+ A L Sbjct: 300 VETSNVNGVMDGDIDNFIIAYL 321 >gi|14195074|sp|P58105|RF2_CHLMU RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 369 Score = 249 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 160/341 (46%), Positives = 210/341 (61%), Gaps = 1/341 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 LFD + L L + W +V A + + L + E+++++ Sbjct: 23 LFDPEEKETELKNLEQLSIQDSFWDDVSRAGRISEKIARLKQQLLEYNELKNKINSIKFF 82 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 LE D I +E + ++ + LL+GE D N +L ++AGAGGTES D Sbjct: 83 LEDEESSKDLEIQKELEKEFIFCEKKIAEWETLRLLAGELDRNSCFLSINAGAGGTESCD 142 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 W ML RMY+RWA +K E ++ DGE AGIK TL + G AYG+ K E GVHRLVR Sbjct: 143 WVEMLFRMYSRWANSHGWKVEVIDRLDGEVAGIKHITLKLIGEYAYGYAKAESGVHRLVR 202 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+DSN++RHTSF+S+ V+P +DD IE+EI D RIDTYR+SGAGGQHVN TDSAVRI Sbjct: 203 ISPFDSNAKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRI 262 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 TH PTG+VV CQ ERSQ +N+ NMLRA++Y+ LQ+R E N K EI WG QI Sbjct: 263 THFPTGIVVSCQSERSQIQNREACMNMLRARIYQKLLQERLEKQNTNRKEKKEISWGSQI 322 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 R+YV QPY +VKD+RT E + ++DG+ LD F+KA LA Sbjct: 323 RNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYLA 363 >gi|291276501|ref|YP_003516273.1| peptide chain release factor 2 [Helicobacter mustelae 12198] gi|290963695|emb|CBG39527.1| peptide chain release factor 2 [Helicobacter mustelae 12198] Length = 365 Score = 249 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 166/352 (47%), Positives = 236/352 (67%), Gaps = 4/352 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +++ + + D +RL + +DP+ W + A + +E+ ++ ++ + Sbjct: 13 LKTKVDSIHKIIKPDTLKERLCEIEKLQQDPNFWNDAKRAGEIGKEKSKIERMLATYQNA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ + D L E+ +D L+ Q ++ E++ + E +LSGE D +A + + Sbjct: 73 KNSIDDARELFEI--SANDTDTLELLFAESQNLEQEIKKVEIEVMLSGEHDGANAIVTIQ 130 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDW ++L RMY RW E+R FK E L+ DGEEAGIK L+KG NAYG++K Sbjct: 131 PGAGGTESQDWGSILYRMYLRWCERRGFKAEILDYQDGEEAGIKGVAFLVKGENAYGYMK 190 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+D+N++RHTSF+S+ V P +DD+IEI+I E D RIDTYRASGAGGQH Sbjct: 191 TESGVHRLVRNSPFDANTKRHTSFASVQVSPELDDNIEIDIEEKDLRIDTYRASGAGGQH 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T+SA+RITH+PTG+VVQCQ +RSQHKNKA A ML++KLYELE +K+ +++ Sbjct: 251 INKTESAIRITHLPTGIVVQCQNDRSQHKNKASALKMLQSKLYELEREKQN--SSVATQE 308 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+NI ++ +LDGD+D ++ L K Sbjct: 309 KSEIGWGHQIRSYVLSPYQQVKDNRSNIAYSNVEAILDGDIDSIIEGVLISK 360 >gi|257069176|ref|YP_003155431.1| peptide chain release factor 2 [Brachybacterium faecium DSM 4810] gi|256559994|gb|ACU85841.1| bacterial peptide chain release factor 2 (bRF-2) [Brachybacterium faecium DSM 4810] Length = 371 Score = 249 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 142/353 (40%), Positives = 217/353 (61%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L+ + + D D +++ L + LW +V A+ + H + I E Sbjct: 12 QLRSTLSSIEQVTDIDALDAKIADLEKQASAQDLWDDVDNAQKVSSALSHAQSERRRISE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + R+ D ++++LA EEDD L+E + L I ++ + +LLSGE D DA + + Sbjct: 72 LDSRIEDLEVMVQLAAEEDDADTLEEAENELVSIHKTLDELEVRTLLSGEYDERDAVITI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG ++ D+A ML+RMY RWAE+ + T+ ++ EEAG+KS T + P AYG L Sbjct: 132 RAGAGGVDAADFAEMLMRMYLRWAERHGYATKVMDTSHAEEAGLKSVTFEVSAPFAYGTL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+++ + IEI E+D ++D +R+SG GGQ Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDSIEIPENDLKVDVFRSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+TH+PTG VV Q E+SQ +N+A A +++++L L+ + Sbjct: 252 SVNTTDSAVRMTHLPTGTVVSMQDEKSQIQNRAAALRVMQSRLLLLKKAEEAAERKELAG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT+ ++ +PS V DG++D+F+ A + + Sbjct: 312 D-VKASWGDQMRSYVLNPYQMVKDLRTDYQEGNPSSVFDGEIDEFIDAGIRWR 363 >gi|15837713|ref|NP_298401.1| peptide chain release factor 2 [Xylella fastidiosa 9a5c] gi|9106068|gb|AAF83921.1|AE003947_1 peptide chain release factor 2 [Xylella fastidiosa 9a5c] Length = 338 Score = 249 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 170/326 (52%), Positives = 233/326 (71%), Gaps = 1/326 (0%) Query: 28 TKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQE 87 + E P +W A+ L RER LD ++ I + + + + L+LA E D +LQ Sbjct: 3 RELESPTIWNTPDYAQQLGRERSLLDKTVTGIAHVLNGVAEASEFLDLAEIEQDQEMLQA 62 Query: 88 TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 +++ +L+VE +F+ + SG+ D +A++++ AGAGGTE+QDWA MLLRMY RWAE Sbjct: 63 VLNDVDIYQLQVEKLEFQRMFSGKMDGANAFVDIQAGAGGTEAQDWAEMLLRMYLRWAEG 122 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 R +K E LE+ GE AGIKSAT ++G AYGWLK E GVHRLVR SP+DS++RRHTSF+ Sbjct: 123 RGWKAELLEVSGGEVAGIKSATFRVEGDFAYGWLKTETGVHRLVRKSPFDSDNRRHTSFT 182 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 S++V P VDD+I+IEI+ +D + D YR+SGAGGQHVN T+SAVRITH+P+G+VV CQ ER Sbjct: 183 SVFVSPEVDDNIDIEINPADLKTDVYRSSGAGGQHVNKTESAVRITHVPSGIVVACQTER 242 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQH N+ +A ML AKLYE E+QKR ++ E+SK++IGWG QIR+YVL +KDLR Sbjct: 243 SQHANRDRAMKMLAAKLYESEIQKRNAEKDVLEASKSDIGWGSQIRNYVLD-QSRIKDLR 301 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAI 353 T +E++ VLDGDLD+F++A+L Sbjct: 302 TGVERSDTQKVLDGDLDEFIEASLRA 327 >gi|119025481|ref|YP_909326.1| peptide chain release factor 2 [Bifidobacterium adolescentis ATCC 15703] gi|154486912|ref|ZP_02028319.1| hypothetical protein BIFADO_00745 [Bifidobacterium adolescentis L2-32] gi|118765065|dbj|BAF39244.1| peptide chain release factor 2 [Bifidobacterium adolescentis ATCC 15703] gi|154084775|gb|EDN83820.1| hypothetical protein BIFADO_00745 [Bifidobacterium adolescentis L2-32] Length = 376 Score = 249 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 140/353 (39%), Positives = 209/353 (59%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + D D L K +P LW + A+ + + + + + + Sbjct: 12 EARAKYESISKALDVDRLTAEAKDLEVKAAEPGLWDDPENAQKVTSKLSAVQSQLKRLAS 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 R+ D L+EL EE+D L E ++ I+ +++ + ++LL GE D A + + Sbjct: 72 ADQRIEDVETLVELGQEEEDADTLAEAKAEVESIQKDLDDMEIQTLLDGEYDERSAVVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A MLLRMY RWAE+ +K + ++ EEAGIKSAT + P AYG L Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+V+ + I++ +S+ R+DTY +SG GGQ Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTT SAVRITHIPTG+VV Q ERSQ +N+A A +L+++L L ++ + Sbjct: 252 GVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHEEEAKKKKELAG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD+D+F++A + + Sbjct: 312 D-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDEFIEAGIRWR 363 >gi|312278454|gb|ADQ63111.1| Bacterial peptide chain release factor 2 (BRF-2) [Streptococcus thermophilus ND03] Length = 326 Score = 249 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 148/325 (45%), Positives = 207/325 (63%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L +++ + L L + E+D S+ +E Sbjct: 1 MTEPDFWNDNIAAQKTSQELNELKIKYETFNNMKELSDETE--LYLEMLEEDDSVQEELE 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L+++ + + LLS D N+A LE+H G+GGTE+QDWA MLLRMY R+ + Sbjct: 59 ETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWAEMLLRMYQRYGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TL +GPNAYG+LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN + VR+THIPTG+VV +R+Q Sbjct: 179 EVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E +K+ E N + K EI WG QIRSYV PY MVKD RT Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTG 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 V+DGD++ F+ A L + Sbjct: 299 YGVAQVDKVIDGDIEGFIDAYLKWR 323 >gi|71276052|ref|ZP_00652333.1| Peptide chain release factor 2 [Xylella fastidiosa Dixon] gi|71899474|ref|ZP_00681632.1| Peptide chain release factor 2 [Xylella fastidiosa Ann-1] gi|170729664|ref|YP_001775097.1| peptide chain release factor 2 [Xylella fastidiosa M12] gi|71163135|gb|EAO12856.1| Peptide chain release factor 2 [Xylella fastidiosa Dixon] gi|71730787|gb|EAO32860.1| Peptide chain release factor 2 [Xylella fastidiosa Ann-1] gi|167964457|gb|ACA11467.1| peptide chain release factor RF-2 [Xylella fastidiosa M12] Length = 338 Score = 249 bits (635), Expect = 5e-64, Method: Composition-based stats. Identities = 170/326 (52%), Positives = 233/326 (71%), Gaps = 1/326 (0%) Query: 28 TKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQE 87 + E P +W A+ L RER LD ++ I + + + + L+LA E D +LQ Sbjct: 3 RELESPTIWNTPDYAQQLGRERSLLDKTVTGIAHVLNGVAEASEFLDLAEIEQDQEMLQA 62 Query: 88 TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 +++ +L+VE +F+ + SG+ D +A++++ AGAGGTE+QDWA MLLRMY RWAE Sbjct: 63 VLNDVDIYQLQVEKLEFQRMFSGKMDGANAFVDIQAGAGGTEAQDWAEMLLRMYLRWAEG 122 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 R +K E LE+ GE AGIKSAT ++G AYGWLK E GVHRLVR SP+DS++RRHTSF+ Sbjct: 123 RGWKAELLEVSGGEVAGIKSATFRVEGDFAYGWLKTETGVHRLVRKSPFDSDNRRHTSFT 182 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 S++V P VDD+I+IEI+ +D + D YR+SGAGGQHVN T+SAVRITH+P+G+VV CQ ER Sbjct: 183 SVFVSPEVDDNIDIEINPADLKTDVYRSSGAGGQHVNKTESAVRITHVPSGIVVACQTER 242 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQH N+ +A ML AKLYE E+QKR ++ E+SK++IGWG QIR+YVL +KDLR Sbjct: 243 SQHANRDRAMKMLAAKLYESEIQKRNAEKDVLEASKSDIGWGSQIRNYVLD-QSRIKDLR 301 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAI 353 T +E++ VLDGDLD+F++A+L Sbjct: 302 TGVERSDTQKVLDGDLDEFIEASLKA 327 >gi|18311152|ref|NP_563086.1| peptide chain release factor 2 [Clostridium perfringens str. 13] gi|18145835|dbj|BAB81876.1| peptide chain release factor 2 [Clostridium perfringens str. 13] Length = 323 Score = 249 bits (635), Expect = 6e-64, Method: Composition-based stats. Identities = 150/322 (46%), Positives = 217/322 (67%), Gaps = 1/322 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++ W +V +A+ + +E + + + I + + +R+ D +L EL E D+ + + Sbjct: 1 MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFRNLNERIDDVEVLKELMEENDEETAKE-II 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + E++ + E++LSGE D NDA L +H G GG+++ DW MLLRMYTRW EK+ Sbjct: 60 SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + E ++ G+EAG+KS TL +KG AYG+LK E+G+HRLVRISP+++N +R TSF+S+ Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + +IEI+ D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ Sbjct: 180 EVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 N+ A ML++KL EL+ + +E ++GWG QIRSYV PY MVKD RTN Sbjct: 240 FSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRTN 299 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 +E ++ + V+DGD+D+F+ A L Sbjct: 300 VETSNVNGVMDGDIDNFIIAYL 321 >gi|84494447|ref|ZP_00993566.1| peptide chain release factor 2 [Janibacter sp. HTCC2649] gi|84383940|gb|EAP99820.1| peptide chain release factor 2 [Janibacter sp. HTCC2649] Length = 370 Score = 249 bits (635), Expect = 6e-64, Method: Composition-based stats. Identities = 139/352 (39%), Positives = 206/352 (58%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + D ++ L + P LW + +A+ + + + Sbjct: 12 LRTTMTSVRDVTDLTALEATIADLEEQVAAPDLWDDQEKAQAVTSLLSRAKAEYDRVTGM 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ D L+E+ EE+D L E L+ +K V + +LLSGE D A + + Sbjct: 72 DTKVDDLEALVEMGQEENDAETLLEAEKELKIVKKAVGELEVRTLLSGEWDERSAVVTIR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A ML+RMY RWAE+ + T+ ++ EEAGIKSAT + P A+G L Sbjct: 132 AGAGGVDAADFAEMLMRMYLRWAERHGYPTKVMDTSYAEEAGIKSATFEVNVPYAFGNLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF ++ V P+++ + IEI E+D +ID +R+SG GGQ Sbjct: 192 VEGGTHRLVRISPFDNQGRRQTSFVAVEVIPLIEGTDSIEIPENDLKIDVFRSSGPGGQS 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG VV Q E+SQ +N+A A +++++L L+ + + Sbjct: 252 VNTTDSAVRMTHIPTGTVVSMQNEKSQIQNRAAALRVMQSRLLLLKRAEEAAVKKEMAGD 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E +P+ V DGD+D F++A + + Sbjct: 312 -VKASWGDQMRSYVLNPYQMVKDLRTEFETGNPTAVFDGDIDGFIEAGIRWQ 362 >gi|322688633|ref|YP_004208367.1| peptide chain release factor [Bifidobacterium longum subsp. infantis 157F] gi|320459969|dbj|BAJ70589.1| peptide chain release factor [Bifidobacterium longum subsp. infantis 157F] Length = 374 Score = 249 bits (635), Expect = 6e-64, Method: Composition-based stats. Identities = 138/353 (39%), Positives = 205/353 (58%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + D D + L T+ P LW + A+ + ++ + + Sbjct: 12 EARAKYESIAKALDVDRLKADIKDLETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNS 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 R+ D L+EL EE D L E + I+ +++ + ++LL GE D A + + Sbjct: 72 ASQRIDDVETLVELGREEGDQDSLDEAQSEIGEIQKDLDQMEIQTLLDGEYDERSAVVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A MLLRMY R+ E+ FK + ++ EEAGIKSAT + P AYG L Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+V+ + I+I ++D R+DTY +SG GGQ Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTT SAVRITH+PTG+VV Q ERSQ +N+A A +L+++L L ++ + Sbjct: 252 GVNTTYSAVRITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVLRHEEEAKKKKELAG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD++ F++A + + Sbjct: 312 D-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINAFIEAGIRWR 363 >gi|163852399|ref|YP_001640442.1| peptide chain release factor 2 [Methylobacterium extorquens PA1] gi|218531158|ref|YP_002421974.1| peptide chain release factor 2 [Methylobacterium chloromethanicum CM4] gi|240139734|ref|YP_002964211.1| peptide chain release factor RF-2 [Methylobacterium extorquens AM1] gi|254562146|ref|YP_003069241.1| peptide chain release factor RF-2 [Methylobacterium extorquens DM4] gi|163664004|gb|ABY31371.1| peptide chain release factor 2 [Methylobacterium extorquens PA1] gi|218523461|gb|ACK84046.1| peptide chain release factor 2 [Methylobacterium chloromethanicum CM4] gi|240009708|gb|ACS40934.1| peptide chain release factor RF-2 [Methylobacterium extorquens AM1] gi|254269424|emb|CAX25390.1| peptide chain release factor RF-2 [Methylobacterium extorquens DM4] Length = 321 Score = 249 bits (635), Expect = 6e-64, Method: Composition-based stats. Identities = 220/309 (71%), Positives = 253/309 (81%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD A++ IK+++ L D L+EL E D + + E ++ ++ E +Q E Sbjct: 1 MRERQELDEAVTAIKKLERDLEDGATLIELGEMEGDQASISEGEATIKAVEKEAASRQVE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D YLEVHAGAGGTESQDWANML RMY RWAE+RKFK E +E+ DGEEAGI Sbjct: 61 TLLSGEADGFDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKFKVEIVEMTDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K ATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSF+S+WVYPVVDD IEIEI E Sbjct: 121 KGATLLIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVVDDRIEIEIKE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYR+SGAGGQHVNTTDSAVRITH PTG+VV CQQERSQHKN+A AWNMLRA+LY Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHNPTGIVVACQQERSQHKNRATAWNMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE AN +SKT+IGWG QIRSYVLQPYQ+VKDLRT + T P +VLDGDLD Sbjct: 241 EAELKKREEKANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGTQSTDPDEVLDGDLDP 300 Query: 346 FMKATLAIK 354 FM+A+LA + Sbjct: 301 FMEASLAQR 309 >gi|225350864|ref|ZP_03741887.1| hypothetical protein BIFPSEUDO_02438 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225158320|gb|EEG71562.1| hypothetical protein BIFPSEUDO_02438 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 376 Score = 248 bits (634), Expect = 6e-64, Method: Composition-based stats. Identities = 139/353 (39%), Positives = 208/353 (58%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + D D + L + +P LW N A+ + + + + + + Sbjct: 12 EARAKYESISKALDVDRLTAQAKDLEVQAAEPGLWDNPENAQKVTSKLSAVQSQLKRLAS 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 R+ D L+EL EE+D L E ++ I+ ++ + ++LL GE D A + + Sbjct: 72 ASQRIDDVETLVELGQEEEDADTLAEAQSEVESIQNDLADMEIQTLLDGEYDERSAVVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A MLLRMY RWAE+ +K + ++ EEAGIKSAT + P AYG + Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRM 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+V+ + I++ +S+ R+DTY +SG GGQ Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTT SAVRITHIPTG+VV Q ERSQ +N+A A +L+++L L ++ + Sbjct: 252 GVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHEEEAKKKKELAG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD+D F++A + + Sbjct: 312 D-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAGIRWR 363 >gi|58336996|ref|YP_193581.1| peptide chain release factor 2 [Lactobacillus acidophilus NCFM] gi|227903556|ref|ZP_04021361.1| peptide chain release factor RF2 [Lactobacillus acidophilus ATCC 4796] gi|58254313|gb|AAV42550.1| peptide chain release factor 2 [Lactobacillus acidophilus NCFM] gi|227868443|gb|EEJ75864.1| peptide chain release factor RF2 [Lactobacillus acidophilus ATCC 4796] Length = 332 Score = 248 bits (634), Expect = 6e-64, Method: Composition-based stats. Identities = 152/324 (46%), Positives = 200/324 (61%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W N +A+ L+ E L ++ + + L L+L EE D + E Sbjct: 1 MAQPDFWDNQEKAQKLISENNVLKEKRDSFLKLSEDYENELTALDLLREEPDSDLQTEVE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +L ++ + + LLSG+ DS++A E+H GAGGTE+ DW MLLRMY R+ + Sbjct: 61 TDLIALQEAFHNYELDLLLSGKYDSHNALFEIHPGAGGTEAMDWGQMLLRMYQRYCDTAG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E + GEEAG+KS T + G NAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 121 FKFEINDYEPGEEAGVKSVTARVVGHNAYGMLKSENGVHRLVRISPFDSAKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DDSI+I+I D RID YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ Sbjct: 181 EVIPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A N LRAKL+ LE +K+ + + + EIGWG QIRSYV PY +VKDLRT Sbjct: 241 IQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + V+DG L F+ + L Sbjct: 301 YETADTTGVMDGKLQPFIYSYLQW 324 >gi|313207347|ref|YP_004046524.1| bacterial peptide chain release factor 2 (brf-2) [Riemerella anatipestifer DSM 15868] gi|312446663|gb|ADQ83018.1| bacterial peptide chain release factor 2 (bRF-2) [Riemerella anatipestifer DSM 15868] gi|315023242|gb|EFT36252.1| peptide chain release factor 2 [Riemerella anatipestifer RA-YM] gi|325335194|gb|ADZ11468.1| Protein chain release factor B [Riemerella anatipestifer RA-GD] Length = 376 Score = 248 bits (634), Expect = 6e-64, Method: Composition-based stats. Identities = 150/352 (42%), Positives = 232/352 (65%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +S++++ L D ++ + KT P W N EA++ +++ + + +EI Sbjct: 16 ISQRVSDLHKYLQIDKKKLEITNDDEKTAAPEFWDNPKEAEVFLKQLRSKKKWVEDYEEI 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D +L+E A +D QE + +VE +F+++LS E D A L++ Sbjct: 76 HTGLEDLQVLIEFAK--EDPDSAQELETAYPTLLEKVENLEFKNMLSNEGDELSAVLQIT 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA+ML+RMY WA+K +K + L +G+ AG+K+ TL I+G A+G+LK Sbjct: 134 AGAGGTESCDWASMLMRMYLMWADKNGYKVKELNFQEGDVAGVKTVTLEIEGEYAFGYLK 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDSIEI I+ +D +T RASGAGGQ+ Sbjct: 194 GENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEININPADISFETMRASGAGGQN 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++AVR+ H PTG++++ + RSQ +NK +A +L+++LYE+EL++R N E++ Sbjct: 254 VNKVETAVRLRHAPTGIIIENSESRSQLQNKEKALQLLKSRLYEIELEERMRARNEIEAN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K +I WG QIR+YV+ PY++VKD+R+ E + V++G++ F+KA L Sbjct: 314 KMKIEWGSQIRNYVMHPYKLVKDVRSGHETSDVDAVMNGEITPFLKAYLMAD 365 >gi|182624026|ref|ZP_02951814.1| peptide chain release factor 2 [Clostridium perfringens D str. JGS1721] gi|177910919|gb|EDT73273.1| peptide chain release factor 2 [Clostridium perfringens D str. JGS1721] Length = 323 Score = 248 bits (634), Expect = 7e-64, Method: Composition-based stats. Identities = 151/322 (46%), Positives = 217/322 (67%), Gaps = 1/322 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++ W +V +A+ + +E + + + I K + +R+ D +L EL E D+ + + Sbjct: 1 MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKELMEENDEETAKE-II 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + E++ + E++LSGE D NDA L +H G GG+++ DW MLLRMYTRW EK++ Sbjct: 60 SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKE 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + E ++ G+EAG+KS TL +KG AYG+LK E+G+HRLVRISP+++N +R TSF+S+ Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + +IEI+ D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ Sbjct: 180 EVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 N+ A ML++KL EL+ + +E ++GWG QIRSYV PY MVKD RTN Sbjct: 240 FSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRTN 299 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E ++ + V+DGD+D+F+ A L Sbjct: 300 FETSNVNGVMDGDIDNFIIAYL 321 >gi|58584553|ref|YP_198126.1| protein chain release factor B [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58418869|gb|AAW70884.1| Protein chain release factor B [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 336 Score = 248 bits (634), Expect = 7e-64, Method: Composition-based stats. Identities = 162/327 (49%), Positives = 230/327 (70%), Gaps = 1/327 (0%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL L ++T D +LWQ+ +A+ +++E + N + +++ D + L++ A++E+D Sbjct: 2 RLEKLESQTADGNLWQDNQKAQEVLKEYSKIKNDVESFSKLESDYNDAISLMKSAIDEND 61 Query: 82 CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 E + L +++ ++ K+ + L + EAD+ND +LE+H+GAGGTES DWA ML+RMY Sbjct: 62 EEFFSEVENELVKLEKLIKRKETDFLFTDEADNNDCFLEIHSGAGGTESNDWAEMLMRMY 121 Query: 142 TRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 RWAE FK E +E +G+ GIKSA + I G AYGW K E G+HRLVRISP+D+NS Sbjct: 122 IRWAEIYHNFKVEVVEKLEGDSIGIKSAIIKIIGEKAYGWAKSESGIHRLVRISPFDANS 181 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 +RHTSF SI V PV++DSI+I + E +IDTYRASGAGGQHVN T+SAVR+THIPTGV+ Sbjct: 182 KRHTSFVSIGVTPVIEDSIDIAVDEGTLKIDTYRASGAGGQHVNKTESAVRVTHIPTGVI 241 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 VQCQ RSQH+NK +A +L+ +LY+++L+K+E+ K IGWG QIRSYV+ PY Sbjct: 242 VQCQNNRSQHQNKNEALKLLKGRLYQIKLEKKEQKMAEEYGKKCGIGWGNQIRSYVMHPY 301 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFM 347 QMVKDLRT E + + + DG++D F+ Sbjct: 302 QMVKDLRTGYEVGNINSIFDGNIDCFI 328 >gi|228472944|ref|ZP_04057701.1| peptide chain release factor 2, programmed [Capnocytophaga gingivalis ATCC 33624] gi|228275526|gb|EEK14303.1| peptide chain release factor 2, programmed [Capnocytophaga gingivalis ATCC 33624] Length = 366 Score = 248 bits (634), Expect = 7e-64, Method: Composition-based stats. Identities = 146/352 (41%), Positives = 235/352 (66%), Gaps = 2/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LS+++ L D ++ KT P W + +A++L+++ Q ++ ++ Sbjct: 9 ELSQRVENLEKYLQIDKKKIEIANEEEKTLAPDFWDSPKQAQLLVQKLQSQKKWVTDYEK 68 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + I+L+ ++ +E D + L +E +F ++LS E D+ A L++ Sbjct: 69 SAEMVEELQIMLDFYK--ENAISAEEVEDFYGQTLLHIENLEFRNMLSDEGDALSAVLQI 126 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGGTES DWA+ML+RMY WA ++ F + L +G+ AG+K+ TL I G A+G+L Sbjct: 127 TAGAGGTESCDWASMLMRMYMMWANRQGFSVKELNFQEGDVAGVKTVTLEIDGEFAFGYL 186 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE GVHRLVRISP+DSN++RHTSF+S++VYP+ DD+IEIEI+ +D +T R+SGAGGQ Sbjct: 187 KGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDTIEIEINPADISFETMRSSGAGGQ 246 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN ++AVR+ H PTG++++ + RSQ NK +A +L+++LYE+EL+KR+ + E+ Sbjct: 247 NVNKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQLLKSQLYEIELKKRQAKRDEIEA 306 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K +I WG QIR+YV+ PY++VKD+R+ E T+ V++G+LDDF+KA L + Sbjct: 307 NKMKIEWGSQIRNYVMHPYKLVKDVRSGYETTNVDAVMNGELDDFLKAYLML 358 >gi|317124427|ref|YP_004098539.1| bacterial peptide chain release factor 2 (bRF-2) [Intrasporangium calvum DSM 43043] gi|315588515|gb|ADU47812.1| bacterial peptide chain release factor 2 (bRF-2) [Intrasporangium calvum DSM 43043] Length = 370 Score = 248 bits (634), Expect = 7e-64, Method: Composition-based stats. Identities = 141/352 (40%), Positives = 219/352 (62%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + G+ D D +++ L + +P+LW + +A+ + + + + Sbjct: 12 LRATMDSVRGVTDLDVLAKQIVELERQASEPNLWDDQDKAQQVTSALSRANAERDRVLSM 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 R+ D L+E+A EE D + E +L +IK ++ + +LLSGE D +A + + Sbjct: 72 DSRINDLETLVEMATEESDQDTMDEALRDLAKIKKDLGELEVRTLLSGEYDEREAVVTIR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A ML+RMY RWAE+ + T+ ++ EEAG+KSAT + P A+G L Sbjct: 132 AGAGGVDAADFAEMLMRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVNVPYAFGHLN 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ IEI E++ +ID +R+SG GGQ Sbjct: 192 VEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESDDSIEIPENELKIDVFRSSGPGGQS 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV Q E+SQ +N+A A +L+++L L+ + E + Sbjct: 252 VNTTDSAVRMTHLPTGIVVSMQNEKSQIQNRAAALRVLQSRL-LLQRKAEEAAVKKEMAG 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT+ E +P+ V DGD+D F++A + + Sbjct: 311 DVKASWGDQMRSYVLNPYQMVKDLRTDFETGNPAAVFDGDIDGFIEAGIRWQ 362 >gi|167755601|ref|ZP_02427728.1| hypothetical protein CLORAM_01115 [Clostridium ramosum DSM 1402] gi|237734350|ref|ZP_04564831.1| peptide chain release factor 2 [Mollicutes bacterium D7] gi|167704540|gb|EDS19119.1| hypothetical protein CLORAM_01115 [Clostridium ramosum DSM 1402] gi|229382580|gb|EEO32671.1| peptide chain release factor 2 [Coprobacillus sp. D7] Length = 365 Score = 248 bits (634), Expect = 7e-64, Method: Composition-based stats. Identities = 157/346 (45%), Positives = 209/346 (60%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + D + + + L T W + +AK+ + + ++ L Sbjct: 17 MTEFYQSIDIEAYRREIEGLTVITLQEGFWDDANKAKVTYDKLNKMKKTTDQYDLLETTL 76 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 EL +D + + + E+ + LLSGE D +A +E+H GAG Sbjct: 77 TSLDETYELVKNTEDQEFKEILESDYTVFEKELSKFETMMLLSGEHDDLNAIVEIHPGAG 136 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTESQDWA ML RMY R+A + +K E L+ DG+ AGIKS T+LIKG N YG LK E+G Sbjct: 137 GTESQDWAEMLFRMYQRYAANKGWKVEVLDYLDGDVAGIKSVTMLIKGDNVYGHLKAEKG 196 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR+SP+DS RRHTSF+S+ V P ++ IEIEI +D +IDTYRASGAGGQH+N T Sbjct: 197 VHRLVRLSPFDSAKRRHTSFASVDVMPEFNNEIEIEIQSTDLKIDTYRASGAGGQHINKT 256 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PT +VV CQ +RSQ +N+ QA ML++KLY+L L+K+ + + EI Sbjct: 257 DSAVRITHLPTNIVVTCQSQRSQIQNREQAMVMLKSKLYQLMLEKQASELKELKGEQKEI 316 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL PY +VKD R+ E +P VLDGDLD F+ A L Sbjct: 317 AWGSQIRSYVLHPYSLVKDNRSGYESNNPKAVLDGDLDGFIYAYLK 362 >gi|227497420|ref|ZP_03927652.1| peptide chain release factor RF2 [Actinomyces urogenitalis DSM 15434] gi|226833096|gb|EEH65479.1| peptide chain release factor RF2 [Actinomyces urogenitalis DSM 15434] Length = 374 Score = 248 bits (634), Expect = 7e-64, Method: Composition-based stats. Identities = 142/357 (39%), Positives = 214/357 (59%), Gaps = 4/357 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + D R++ L+ + P LW + A+++ H + +++ Sbjct: 11 RLRHTHASIEAVTDPQALRARIAELSEQAAAPDLWDDPDAAQVVTSNLSHAQADLKRVED 70 Query: 62 IQDRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 + R+ D ++E+ +D +L E +L I ++ + +LLSGE D DA Sbjct: 71 LGSRIDDLEAMVEMAGEEEGDDAAELLAEAESDLASISKDLSELEIRTLLSGEYDQRDAV 130 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + + +GAGG ++ D+A MLLRMY RWAE+ + T+ L+ EEAG+KS T + P AY Sbjct: 131 VTIRSGAGGVDAADFAEMLLRMYLRWAERHGYATKVLDTSYAEEAGLKSVTFEVHAPYAY 190 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G L E G HRLVRISP+D+ RR TSF+++ V P+++ + IE+ E+D RID +R+SG Sbjct: 191 GTLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHIEVPETDIRIDVFRSSGP 250 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +N+A A +L+++L L+ Q+ + Sbjct: 251 GGQSVNTTDSAVRITHLPTGLVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQQEEDAKKKE 310 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQMVKDLRT+ E +P V DGD+D F+ A + +K Sbjct: 311 LAGD-VKASWGDQMRSYVLNPYQMVKDLRTSYEVGNPDSVFDGDIDGFIDAGIRWRK 366 >gi|163795148|ref|ZP_02189116.1| Protein chain release factor B [alpha proteobacterium BAL199] gi|159179546|gb|EDP64075.1| Protein chain release factor B [alpha proteobacterium BAL199] Length = 322 Score = 248 bits (634), Expect = 8e-64, Method: Composition-based stats. Identities = 195/309 (63%), Positives = 246/309 (79%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L+ + + ++ L D L+L+EL E D + + + L+ I+++ E Q E Sbjct: 1 MQERTRLEKQLGEVNQLNQGLEDALMLIELGETEGDDATVADAEKELEAIRVKAESMQIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD+ND YLEVHAGAGGTE+QDWA MLLRMYTRW+E+R FK E LE GEEAG+ Sbjct: 61 SLLSGEADANDCYLEVHAGAGGTEAQDWAEMLLRMYTRWSERRGFKVEWLEESQGEEAGL 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G NAYGWLK E GVHRLVRISPYDS +RRHTSFSS WVYPV+DDSI+I + + Sbjct: 121 KSATVKISGHNAYGWLKIESGVHRLVRISPYDSQARRHTSFSSAWVYPVIDDSIDIVVED 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D ++DTYRASGAGGQHVN TDSA+RITH+P+G+VVQCQ +RSQH+N+A A ML+A+LY Sbjct: 181 KDLKVDTYRASGAGGQHVNRTDSAIRITHLPSGIVVQCQADRSQHRNRATAMEMLKARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL++REE A+ E++K++IGWG QIRSYVLQPYQMVKDLRTN E ++P+ VLDGD+D Sbjct: 241 EAELKRREEEASATEATKSDIGWGHQIRSYVLQPYQMVKDLRTNEESSNPAAVLDGDIDA 300 Query: 346 FMKATLAIK 354 F++A LA + Sbjct: 301 FLEAALAAR 309 >gi|220927713|ref|YP_002504622.1| peptide chain release factor 1 [Clostridium cellulolyticum H10] gi|254790874|sp|B8I562|RF1_CLOCE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|219998041|gb|ACL74642.1| peptide chain release factor 1 [Clostridium cellulolyticum H10] Length = 359 Score = 248 bits (634), Expect = 8e-64, Method: Composition-based stats. Identities = 124/351 (35%), Positives = 186/351 (52%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD A R ++ K DP + N E K M+E L+ + +E + Sbjct: 1 MFDKLQAAEDRYEEISHKLSDPDVINNQDEYKKYMKECSDLEEIVQKYREYTKVTKEIEE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKL----EVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 EL + D + Q + + + D + +E+ GAGG Sbjct: 61 ARELLEQTLDKDFREMVQQEFQEAQEKLEVIKRQLKILIVPKDPNDDKNVIVEIRGGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A +L R ++AEK+++K E L+ + E G K I+G AY LK E GV Sbjct: 121 EEAALFAGVLFRAMAKYAEKKRWKYEILDSNPTELGGFKEVVFTIEGKGAYSRLKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S+ R HTS ++ V P + ++++I+ SD RIDTYRASGAGGQH+N TD Sbjct: 181 HRVQRVPSTESSGRIHTSTITVAVLP-EVEEVDVDINPSDLRIDTYRASGAGGQHINKTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SA+RITH+PTG+VV CQ ERSQHKNK +A +LR+KLYE+ +++ I + + K ++G Sbjct: 240 SAIRITHMPTGIVVSCQDERSQHKNKDKAMKILRSKLYEIAQEQQ--INEVAQDRKNQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R N+ VLDGDLD+ + A + + Sbjct: 298 TGDRSERIRTYNY-PQGRVTDHRINLTLYKLEQVLDGDLDELIDALITTDQ 347 >gi|213692886|ref|YP_002323472.1| peptide chain release factor 2 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213524347|gb|ACJ53094.1| peptide chain release factor 2 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320459060|dbj|BAJ69681.1| peptide chain release factor [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 374 Score = 248 bits (634), Expect = 8e-64, Method: Composition-based stats. Identities = 137/353 (38%), Positives = 205/353 (58%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + D + + L T+ P LW + A+ + ++ + + Sbjct: 12 EARAKYESIAKALDINRLKADIKDLETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNS 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 R+ D L+EL EE D L E + I+ +++ + ++LL GE D A + + Sbjct: 72 ASQRIDDVETLVELGHEEGDQDSLDEAQSEIGEIQKDLDQMEIQTLLDGEYDERSAVVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A MLLRMY R+ E+ FK + ++ EEAGIKSAT + P AYG L Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+V+ + I+I ++D R+DTY +SG GGQ Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTT SAVRITH+PTG+VV Q ERSQ +N+A A +L+++L L ++ + Sbjct: 252 GVNTTYSAVRITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVLRHEEEAKKKKELAG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD++ F++A + + Sbjct: 312 D-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINAFIEAGIRWR 363 >gi|7404432|sp|O51101|RF2_BORBU RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 359 Score = 248 bits (634), Expect = 8e-64, Method: Composition-based stats. Identities = 149/344 (43%), Positives = 215/344 (62%), Gaps = 4/344 (1%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 LFD + ++ + + W + A+ +++ + L N I +E+ +++ D Sbjct: 17 RKLFDKNEIQAKIEKYEKEINQKNFWNDPKRAQKVIKAQSILKNKIDPWEELINKIKDLS 76 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L ++ ++ + + S E D+N+A+L +H+GAGGTE+ Sbjct: 77 DL---CEIAENEKDTNGLEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGGTEA 133 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DW ML RMY+R+AE++K+KTE +++ + E GIKS T+ IKG AYG LK E G+HRL Sbjct: 134 CDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRL 192 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 +RISP+D+ +RHTSF+S++V PV+DD IEI I D RIDTYRASGAGGQHVN T SAV Sbjct: 193 IRISPFDAAKKRHTSFASVFVDPVIDDKIEITIKPEDIRIDTYRASGAGGQHVNKTSSAV 252 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHI TG+V Q Q +RSQHKNK A +L+++LYE K +E + +K EI WG Sbjct: 253 RITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGN 312 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QIRSYV QPY +VKD RT E ++ + V+DG++D+F++ L K Sbjct: 313 QIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 356 >gi|315187113|gb|EFU20870.1| bacterial peptide chain release factor 2 (bRF-2) [Spirochaeta thermophila DSM 6578] Length = 364 Score = 248 bits (634), Expect = 8e-64, Method: Composition-based stats. Identities = 168/355 (47%), Positives = 233/355 (65%), Gaps = 4/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + R+ GG+F+ + +++S L +T P LW + A+ ++ + L + Sbjct: 1 MRRKSKKPGGIFENSSIKEQISRLEEETGRPDLWNDRKHAEEVLSRLRRLKVRYEGWASL 60 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQR---IKLEVEYKQFESLLSGEADSNDAYL 119 + D L +LA EE+D S +E + Q+ + + + LL+ E D DAYL Sbjct: 61 VQEVEDIHTLYDLAAEENDPSQEEEEEELRQQLAEAERKFRELRLRELLNEEYDQKDAYL 120 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 +HAGAGG E+ DWA+MLLRMY RW E++ F T+ +++ + +E GIKS T+ +KG A+G Sbjct: 121 TIHAGAGGMEACDWASMLLRMYLRWLERKGFSTQIVDMVE-DEGGIKSVTVEVKGDYAFG 179 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 +LKGE GVHRLVRISP+D++ RRHTSF+S++V P+++D IE++I D RIDTYR+ GAG Sbjct: 180 YLKGEAGVHRLVRISPFDASGRRHTSFASVYVSPIIEDDIEVDIRPEDLRIDTYRSQGAG 239 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQHVN T+SAVRITH+PTG+VVQCQ ERSQHKN+ A MLR++LYE Q REE Sbjct: 240 GQHVNKTESAVRITHLPTGIVVQCQNERSQHKNREIAMRMLRSRLYEYYQQLREEEQEKK 299 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K +I WG QIRSYV QPY MVKDLRT +E + V+DGDLD F++A L + Sbjct: 300 AIEKKDISWGNQIRSYVFQPYTMVKDLRTRVETGNIQAVMDGDLDMFIEAYLLQQ 354 >gi|12323033|gb|AAG51510.1|AC058785_13 peptide chain release factor 2, putative [Arabidopsis thaliana] Length = 426 Score = 248 bits (634), Expect = 8e-64, Method: Composition-based stats. Identities = 158/351 (45%), Positives = 222/351 (63%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +++ + + W + RL L+ + LW + A + RE L + + Sbjct: 66 IAQSIQVIKRRLQWKKLLVRLKVLSAELNKSDLWDDPTHAGKISREHGSLTGKMKGVMTF 125 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L +++ +L+LA EE+D + ET L ++ + K+ E+LLS + D Y+EV Sbjct: 126 ERELLEHIDMLKLAKEENDSELESETLKALIDMRRVSKEKELEALLSADNDPCSCYIEVQ 185 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA M++ MY WA++RKF ++ GE AGIK AT+ + G AYG+ K Sbjct: 186 AGAGGTESNDWAAMVMEMYKTWAQRRKFSVTVVDEAPGEIAGIKRATIKVNGEYAYGYAK 245 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVRISP+DS RRHTSF+++ V P+ D S +EI++SD RI+ +R+ GAGGQ Sbjct: 246 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGSTRVEINDSDLRIERFRSGGAGGQ 305 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H NTTDSAVRI HIPTG+ CQ ERSQH NKA A +L+++L +LE+ ++ + Sbjct: 306 HANTTDSAVRIVHIPTGITATCQNERSQHSNKASAMAVLQSRLDQLEMARQTAMNAQHTQ 365 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 S TEI WG QIR+YVL PY+MVKDLRTN E + P VL+GDLD F+ + L+ Sbjct: 366 SLTEISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSFLS 416 >gi|227877191|ref|ZP_03995265.1| peptide chain release factor RF2 [Lactobacillus crispatus JV-V01] gi|256848945|ref|ZP_05554379.1| peptide chain release factor 2 [Lactobacillus crispatus MV-1A-US] gi|262045712|ref|ZP_06018676.1| peptide chain release factor 2 [Lactobacillus crispatus MV-3A-US] gi|293380190|ref|ZP_06626272.1| peptide chain release factor 2 [Lactobacillus crispatus 214-1] gi|295692545|ref|YP_003601155.1| peptide chain release factor 2 [Lactobacillus crispatus ST1] gi|227863245|gb|EEJ70690.1| peptide chain release factor RF2 [Lactobacillus crispatus JV-V01] gi|256714484|gb|EEU29471.1| peptide chain release factor 2 [Lactobacillus crispatus MV-1A-US] gi|260573671|gb|EEX30227.1| peptide chain release factor 2 [Lactobacillus crispatus MV-3A-US] gi|290923234|gb|EFE00155.1| peptide chain release factor 2 [Lactobacillus crispatus 214-1] gi|295030651|emb|CBL50130.1| Peptide chain release factor 2 [Lactobacillus crispatus ST1] Length = 332 Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats. Identities = 152/324 (46%), Positives = 201/324 (62%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W N +A+ L+ E L ++Q D +EL EE D + +E Sbjct: 1 MAQPDFWNNQEKAQKLISETNRLKEKRDSFLKLQTSYEDETTAVELLREEPDPDLQKEVE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +L ++ + + + LLSG+ DS++A +E+H GAGGTE+ DW MLLRMY R+ + Sbjct: 61 ADLATLQEDFHNYELDLLLSGKYDSHNALMEIHPGAGGTEAMDWGQMLLRMYQRYCDTAG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E + GEEAG+KS + I G NAYG LK E GVHRLVRISP+D+ RRHTSF+S+ Sbjct: 121 FKFEINDYEPGEEAGLKSVSARIVGKNAYGMLKSENGVHRLVRISPFDAAKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P VDDSI+I+I D R+D YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ Sbjct: 181 EVIPEVDDSIQIDIDPKDLRVDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A N LRAKL+ LE +K+ + + + EIGWG QIRSYV PY +VKDLRT Sbjct: 241 LQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E V+DG L F+ + L Sbjct: 301 HETADAQGVMDGKLQPFIYSYLQW 324 >gi|261855644|ref|YP_003262927.1| peptide chain release factor 1 [Halothiobacillus neapolitanus c2] gi|261836113|gb|ACX95880.1| peptide chain release factor 1 [Halothiobacillus neapolitanus c2] Length = 364 Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats. Identities = 119/339 (35%), Positives = 169/339 (49%), Gaps = 9/339 (2%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 +R LN DP + N + L +E L + + + Q D ++ Sbjct: 12 ALSERYDELNALLSDPEVINNQDRFRSLSKEHARLHDLVVVLDRYQKAKADLQAAEHMSK 71 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESL---LSGEADSNDAYLEVHAGAGGTESQDWA 134 E D + + + + AD D LE+ AG GG E+ +A Sbjct: 72 EPDREMAALALEEMKELQTEIESLDEALKVHLLPHDPADDGDVILEIRAGTGGDEAAIFA 131 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY ++A+ + ++TE L GE G + I G Y LK E G HR+ R+ Sbjct: 132 GDLLRMYLKYADTQGWRTEILSEQPGEHGGYREVIAQISGDGVYAALKFESGAHRVQRVP 191 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS +++ V PVV +S I + S RIDT+RASGAGGQH+N TDSA+R+TH Sbjct: 192 TTETQGRVHTSAATVAVMPVVPESEAITLDPSTLRIDTFRASGAGGQHINKTDSAIRVTH 251 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A+L + E QK A + K +G G + Sbjct: 252 LPTGMVVECQDERSQHKNKARALSVLAARLADAERQK--AHAEQAATRKALVGSGDRSER 309 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P V D R N+ VL GDLD + Sbjct: 310 IRTYNF-PQGRVTDHRINLTLYQLDRVLLGDLDPIIHPL 347 >gi|302334951|ref|YP_003800158.1| bacterial peptide chain release factor 2 (bRF-2) [Olsenella uli DSM 7084] gi|301318791|gb|ADK67278.1| bacterial peptide chain release factor 2 (bRF-2) [Olsenella uli DSM 7084] Length = 370 Score = 248 bits (633), Expect = 9e-64, Method: Composition-based stats. Identities = 155/352 (44%), Positives = 206/352 (58%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+R+L+ + D + ++ L ++ P W + A M E + I++ Sbjct: 11 LARRLDEVESYLHIDERRRVVAELEERSARPGFWDDADAASRSMTELTRAKEDVQGIEDA 70 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D LEL LE D +L E + ++ E+ + S + + D DA + V Sbjct: 71 RTRLGDASAALELGLETGDGDLLDEAARICGALEDELGELELSSWFADDLDHGDAIVTVT 130 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 G GG E+QDW +ML +MY R+ ++R +K + E GI AT + G NAYG L+ Sbjct: 131 PGQGGLEAQDWCDMLFKMYLRYCDRRGWKVTVNDAPAAEAIGIDRATFTVSGKNAYGMLR 190 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQGVHRLVRISP D RR T+F+ + V PV+ D +E++I D RID Y ASG GGQ Sbjct: 191 AEQGVHRLVRISPTDDKKRRQTTFAGVEVLPVLPDDVEVDIDPGDLRIDVYHASGHGGQG 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG VV CQ ERSQ +NKA A +LR++LYELEL KRE + Sbjct: 251 VNTTDSAVRITHLPTGTVVTCQNERSQIQNKAIAMGILRSRLYELELAKREAEIDELRGP 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAI 353 K EIG+G QIRSYVL PYQ+VKDLRT +E + VL DGDLD F+ Sbjct: 311 KHEIGFGNQIRSYVLYPYQLVKDLRTGVETGNVESVLDDGDLDKFIVGYHRW 362 >gi|89890713|ref|ZP_01202222.1| peptide chain release factor 2 (RF-2) [Flavobacteria bacterium BBFL7] gi|89516858|gb|EAS19516.1| peptide chain release factor 2 (RF-2) [Flavobacteria bacterium BBFL7] Length = 386 Score = 248 bits (633), Expect = 9e-64, Method: Composition-based stats. Identities = 145/350 (41%), Positives = 215/350 (61%), Gaps = 2/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ L + ++ L KT P W + A+++M+E ++ + Sbjct: 28 LQERVIALKDYLQIEAKEIEITNLEEKTFSPDFWNDAKAAELIMKELRNKKQWTTDYATA 87 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 D +L E E D N E +F+++LS E D A L++ Sbjct: 88 TTLAEDTEVLYEFFKEGDASEDEVMAKYNAAV--DITEKLEFKNMLSNEGDDMSAVLQIT 145 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA ML+RMY WA+K +K + L G+ AGIK+ TL I+G ++GWLK Sbjct: 146 AGAGGTESCDWAEMLMRMYMMWAQKNNYKVKELNFQAGDVAGIKTVTLEIEGDYSFGWLK 205 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVRISP+DSN++RHTSF+S++VYP+ DD+IEI+I+ +D + D R+SGAGGQ+ Sbjct: 206 GENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDTIEIDINPADIKWDFARSSGAGGQN 265 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++ +TH P+G+V+ + RSQ +N+ +A ML+++L+E+ELQKR + ES Sbjct: 266 VNKVETKAILTHHPSGIVIHNSETRSQLENREKAMQMLKSQLFEIELQKRNAARDEIESG 325 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K +I WG QIR+YV+ PY++VKD+RT E + V++GD+D F+KA L Sbjct: 326 KMKIEWGSQIRNYVMHPYKLVKDVRTAHETGNVDAVMNGDIDAFLKAFLM 375 >gi|57239093|ref|YP_180229.1| peptide chain release factor 2 [Ehrlichia ruminantium str. Welgevonden] gi|57161172|emb|CAH58086.1| peptide chain release factor 2 [Ehrlichia ruminantium str. Welgevonden] Length = 367 Score = 248 bits (633), Expect = 9e-64, Method: Composition-based stats. Identities = 171/355 (48%), Positives = 236/355 (66%), Gaps = 2/355 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 + L++ L + G D DN L LNTK D LW + + A ++ ER + + Sbjct: 12 VNLNKALQLIRGYLDIDNLTSLLVDLNTKCADTSLWNDNLTAHHVLSERARISKIVGLFT 71 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 E+++ LL + + D + + + + + E L S EAD ND ++E Sbjct: 72 ELEEEYQYYNELLSVISNDSDSLLDDLSKGLEALKEKVKKKE-VECLFSDEADQNDCFIE 130 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGGTES DW+NMLLRMY RWAE FKT+ + DGEE G+KSA + + G NAYG Sbjct: 131 IQSGAGGTESNDWSNMLLRMYIRWAEIYHNFKTQVVYKLDGEETGVKSAIIKVIGYNAYG 190 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 W K E G+HRLVRISP++SN++RHT+F+S+ V PV +++ +I+I + D RIDTYRASGAG Sbjct: 191 WSKTESGIHRLVRISPFNSNAKRHTTFASVLVSPVTNENFDIQIHDKDLRIDTYRASGAG 250 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQHVN T+SAVRITHIP+G+VVQCQ RSQH+N +A+N+LR++LY+L+LQ++E+ Sbjct: 251 GQHVNKTESAVRITHIPSGIVVQCQNNRSQHQNLGEAYNLLRSRLYQLKLQEKEKKMAQE 310 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 S + +IGWG QIRSYV+ PYQMVKD+RT E + + VLDGDLD F+ ATL K Sbjct: 311 HSQRCDIGWGNQIRSYVMHPYQMVKDIRTGYETGNVNSVLDGDLDAFIIATLTKK 365 >gi|225374519|ref|ZP_03751740.1| hypothetical protein ROSEINA2194_00134 [Roseburia inulinivorans DSM 16841] gi|225213757|gb|EEG96111.1| hypothetical protein ROSEINA2194_00134 [Roseburia inulinivorans DSM 16841] Length = 358 Score = 248 bits (633), Expect = 9e-64, Method: Composition-based stats. Identities = 123/351 (35%), Positives = 189/351 (53%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ + R L ++ +P + N + LM+E+ + + KE + + Sbjct: 1 MFDKLEDLLIRYEELMSELSEPDVANNPERFRKLMKEQSDILPIVEAYKEYKQCKQNIED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 L + EE D + + + L K V + L D + +E+ AGAGG Sbjct: 61 SLAMLEEESDEEMRELAKEELNDAKNRVAELENELKILLLPKDPNDDKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY +AE + +KTE +E D G+KS T +I G AY +K E GV Sbjct: 121 DEAALFAAEIYRMYQHYAETKNWKTEIMECDDTGIGGMKSVTFMITGAGAYSVMKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P + ++++I E D RID RASGAGGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMP-EAEDVDVQIDEKDIRIDVCRASGAGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V+ Q E+SQ +NKA+A+ +LR KL++LE QK E K++IG Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQIQNKAKAFALLRTKLFDLEQQK--AHDAEAELRKSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R N+ +++GD+ + + A +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRINLTLYKLDKIMNGDIQEIIDACIAADQ 347 >gi|51598335|ref|YP_072523.1| peptide chain release factor 2 [Borrelia garinii PBi] gi|51572906|gb|AAU06931.1| peptide chain release factor 2 [Borrelia garinii PBi] Length = 350 Score = 248 bits (633), Expect = 9e-64, Method: Composition-based stats. Identities = 148/347 (42%), Positives = 213/347 (61%), Gaps = 4/347 (1%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG FD ++ + + W + A+ +++ + L N I +E+ +++ Sbjct: 5 KAFGGSFDKKEIQDKIEKYEKEIHQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIK 64 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D L ++ + ++ + + S E D N A+L +H+GAGG Sbjct: 65 DLSDL---CEIVENEKDINSLEIEFNVLEKQYKNLLTISYFKEELDINSAFLTIHSGAGG 121 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+ DW ML RMY+R+AE++K+KTE +++ + E GIKS T+ IKG AYG LK E G+ Sbjct: 122 TEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSITIEIKGEYAYGLLKSEVGI 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRL+RISP+D+ +RHTSF+S++V PV+D+ IEI I D RIDTYRASGAGGQHVN T Sbjct: 181 HRLIRISPFDAAKKRHTSFASVFVDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHVNKTS 240 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHI TG+V Q Q +RSQHKNK A +L+++LYE K ++ + K EI Sbjct: 241 SAVRITHIETGIVTQSQSDRSQHKNKDMAMKVLKSRLYEYYKNKEDKKNKSKQEVKKEIS 300 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYV QPY +VKD RT E ++ + V+DG++D+F++ L K Sbjct: 301 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 347 >gi|47558936|gb|AAT35568.1| protein release factor 2 [Chlamydia trachomatis] Length = 368 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 158/350 (45%), Positives = 210/350 (60%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L D + L L + W +V A + L +S E+ Sbjct: 12 LLEGLALTRRSLDPEGKENELKELEQQAVQDGFWDDVARAGKISERIARLKQQLSEFNEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++++ LE D + +E + ++ + LLSGE D + +L ++ Sbjct: 72 KNKVSTIQFFLEDEESSKDLEMQKELEKEFVFCERKITEWETLRLLSGELDRSSCFLSIN 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DW M+LRMY RWA ++ E ++ DGE AGIK TL + G AYG+ K Sbjct: 132 AGAGGTESCDWVEMVLRMYMRWASSHSWRVEVIDRLDGEVAGIKHITLKLVGEYAYGYAK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+DSN++RHTSF+S+ V+P +DD IE+EI D RIDTYR+SGAGGQH Sbjct: 192 AESGVHRLVRISPFDSNAKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQH 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSAVRITH PTG+VV Q ERSQ +N+ NMLRA++Y+ LQ+R E NI + Sbjct: 252 VNVTDSAVRITHFPTGIVVSRQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKN 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351 K EI WG QIR+YV QPY +VKD+RT E + ++DG+ LD F+KA L Sbjct: 312 KKEISWGSQIRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYL 361 >gi|15610242|ref|NP_217621.1| peptide chain release factor 2 [Mycobacterium tuberculosis H37Rv] gi|31794284|ref|NP_856777.1| peptide chain release factor 2 [Mycobacterium bovis AF2122/97] gi|121638990|ref|YP_979214.1| peptide chain release factor 2 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148662959|ref|YP_001284482.1| peptide chain release factor 2 [Mycobacterium tuberculosis H37Ra] gi|148824297|ref|YP_001289051.1| peptide chain release factor 2 [Mycobacterium tuberculosis F11] gi|167969713|ref|ZP_02551990.1| peptide chain release factor 2 [Mycobacterium tuberculosis H37Ra] gi|215405101|ref|ZP_03417282.1| peptide chain release factor 2 [Mycobacterium tuberculosis 02_1987] gi|215412969|ref|ZP_03421670.1| peptide chain release factor 2 [Mycobacterium tuberculosis 94_M4241A] gi|215428558|ref|ZP_03426477.1| peptide chain release factor 2 [Mycobacterium tuberculosis T92] gi|215432061|ref|ZP_03429980.1| peptide chain release factor 2 [Mycobacterium tuberculosis EAS054] gi|215447387|ref|ZP_03434139.1| peptide chain release factor 2 [Mycobacterium tuberculosis T85] gi|218754875|ref|ZP_03533671.1| peptide chain release factor 2 [Mycobacterium tuberculosis GM 1503] gi|224991482|ref|YP_002646171.1| peptide chain release factor 2 [Mycobacterium bovis BCG str. Tokyo 172] gi|253797794|ref|YP_003030795.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis KZN 1435] gi|254233729|ref|ZP_04927054.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis C] gi|254365733|ref|ZP_04981778.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis str. Haarlem] gi|254552185|ref|ZP_05142632.1| peptide chain release factor 2 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260188141|ref|ZP_05765615.1| peptide chain release factor 2 [Mycobacterium tuberculosis CPHL_A] gi|260202247|ref|ZP_05769738.1| peptide chain release factor 2 [Mycobacterium tuberculosis T46] gi|289444669|ref|ZP_06434413.1| peptide chain release factor 2 [Mycobacterium tuberculosis T46] gi|289448784|ref|ZP_06438528.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis CPHL_A] gi|289553103|ref|ZP_06442313.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis KZN 605] gi|289571312|ref|ZP_06451539.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis T17] gi|289575817|ref|ZP_06456044.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis K85] gi|289746915|ref|ZP_06506293.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis 02_1987] gi|289751781|ref|ZP_06511159.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis T92] gi|289755223|ref|ZP_06514601.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis EAS054] gi|289759231|ref|ZP_06518609.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis T85] gi|289763284|ref|ZP_06522662.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis GM 1503] gi|294993388|ref|ZP_06799079.1| peptide chain release factor 2 [Mycobacterium tuberculosis 210] gi|297635740|ref|ZP_06953520.1| peptide chain release factor 2 [Mycobacterium tuberculosis KZN 4207] gi|297732739|ref|ZP_06961857.1| peptide chain release factor 2 [Mycobacterium tuberculosis KZN R506] gi|298526578|ref|ZP_07013987.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis 94_M4241A] gi|306777415|ref|ZP_07415752.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu001] gi|313660071|ref|ZP_07816951.1| peptide chain release factor 2 [Mycobacterium tuberculosis KZN V2475] gi|2076680|emb|CAB08395.1| PROBABLE PEPTIDE CHAIN RELEASE FACTOR 2 PRFB (RF-2) [Mycobacterium tuberculosis H37Rv] gi|31619879|emb|CAD96819.1| PROBABLE PEPTIDE CHAIN RELEASE FACTOR 2 PRFB (RF-2) [Mycobacterium bovis AF2122/97] gi|121494638|emb|CAL73119.1| Probable peptide chain release factor 2 prfB [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124599258|gb|EAY58362.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis C] gi|134151246|gb|EBA43291.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis str. Haarlem] gi|148507111|gb|ABQ74920.1| peptide chain release factor 2 [Mycobacterium tuberculosis H37Ra] gi|148722824|gb|ABR07449.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis F11] gi|224774597|dbj|BAH27403.1| peptide chain release factor 2 [Mycobacterium bovis BCG str. Tokyo 172] gi|253319297|gb|ACT23900.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis KZN 1435] gi|289417588|gb|EFD14828.1| peptide chain release factor 2 [Mycobacterium tuberculosis T46] gi|289421742|gb|EFD18943.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis CPHL_A] gi|289437735|gb|EFD20228.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis KZN 605] gi|289540248|gb|EFD44826.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis K85] gi|289545066|gb|EFD48714.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis T17] gi|289687443|gb|EFD54931.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis 02_1987] gi|289692368|gb|EFD59797.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis T92] gi|289695810|gb|EFD63239.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis EAS054] gi|289710790|gb|EFD74806.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis GM 1503] gi|289714795|gb|EFD78807.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis T85] gi|298496372|gb|EFI31666.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis 94_M4241A] gi|308214303|gb|EFO73702.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu001] gi|326902672|gb|EGE49605.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis W-148] gi|328457573|gb|AEB02996.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis KZN 4207] Length = 378 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 161/357 (45%), Positives = 219/357 (61%), Gaps = 8/357 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D + R+ L + DPHLW + A+ + E H + ++E+ Sbjct: 19 LDCTLTTVERVLDVEGLRSRIEKLEHEASDPHLWDDQTRAQRVTSELSHTQGELRRVEEL 78 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYL 119 + RL D +L ELA EE + ++ +K + +LLSGE D +A + Sbjct: 79 RRRLDDLPVLYELAAEEAGAAAADAVAEADAELKSLRADIEATEVRTLLSGEYDEREALV 138 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGG ++ DWA ML+RMY RWAE+ K+ E + EEAGIKSAT + P AYG Sbjct: 139 TIRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYG 198 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+SG G Sbjct: 199 TLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 258 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+THIP+G+VV CQ E+SQ +NK A +L+AKL E +KR E Sbjct: 259 GQSVNTTDSAVRLTHIPSGIVVTCQNEKSQLQNKIAAMRVLQAKLLE---RKRLEERAEL 315 Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 ++ K + G WG Q+RSYVL PYQMVKDLRT E +P+ VLDGDLD F++A + + Sbjct: 316 DALKADGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDLDGFLEAGIRWR 372 >gi|323342407|ref|ZP_08082639.1| peptide chain release factor RF2 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463519|gb|EFY08713.1| peptide chain release factor RF2 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 347 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 152/341 (44%), Positives = 208/341 (60%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 FD ++ L ++ + W + + +++ L + ++ +RL Sbjct: 3 HFDLAQKEAKIKELESEMVEDGFWDDHRHSSQHIQKLNQLKKVVETHHDLLERLMSCSDS 62 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + L EE D ++ I+ E+E LLS + D +A +E+H GAGGTESQD Sbjct: 63 ILLLKEEADEEFQNSLEVEVKEIQKEMESFSVLVLLSHDYDQKNAIVEIHPGAGGTESQD 122 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A ML RMYTRWA+ FK L DG+EAG+KS + + G AYG+LK E+GVHRLVR Sbjct: 123 FAEMLYRMYTRWAQDHGFKISVLNYLDGDEAGLKSVSFSVSGMFAYGYLKAEKGVHRLVR 182 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+DS+ RRHTSF+S+ V P D+SIEI I D +DT RA+GAGGQHVN TDSAVRI Sbjct: 183 ISPFDSSGRRHTSFASVDVAPEFDNSIEITILPEDIDVDTMRATGAGGQHVNKTDSAVRI 242 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 TH TG+VV CQ RSQ +N+ +A ML++KLY+ E+++++ + I WG QI Sbjct: 243 THKKTGIVVTCQAGRSQLQNREEALMMLKSKLYQREIEEKQAQLAAIKGEHKLIEWGSQI 302 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 RSYV PY MVKD RT E + DVLDGD+DDF++A L + Sbjct: 303 RSYVAHPYTMVKDHRTKFETSQYGDVLDGDIDDFIEAFLKM 343 >gi|289642137|ref|ZP_06474289.1| peptide chain release factor 2 [Frankia symbiont of Datisca glomerata] gi|289508100|gb|EFD29047.1| peptide chain release factor 2 [Frankia symbiont of Datisca glomerata] Length = 366 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 154/353 (43%), Positives = 219/353 (62%), Gaps = 4/353 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D +R + L + DP LW + A+ + R + IS ++ + Sbjct: 12 LDATLAGIEAVLDLDTLRRRAADLEREAADPQLWSDQDRAQAVTRRLSSVRGDISRVEAL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D + AL+ D +L E +++L + ++ + +LLSGE D DA +++ Sbjct: 72 RRRLDDVIA----ALDLGDDDLLAEAANDLPTLARDISALEVRTLLSGEYDERDAIVQLS 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ DW MLLRMY RWAE+ + E + + EEAG+KSAT IK P AYG L+ Sbjct: 128 AGAGGVDAADWTAMLLRMYLRWAERHGYAAEVFDTSEAEEAGLKSATFQIKAPYAYGTLR 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+ +RR TSF+ + V PVV+ S +EI + + RID +R+SG GGQ Sbjct: 188 SEHGVHRLVRISPFDNQNRRQTSFAGVEVTPVVEQSDHVEIDDKELRIDIFRSSGPGGQG 247 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT +VV CQ ERSQ +NKA A +L+AKL E + Sbjct: 248 VNTTDSAVRITHLPTNIVVTCQNERSQLQNKAAAMIVLQAKLLERRRAEEAAEKQRLTGG 307 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 ++ +G QIR+YVL PYQMVKDLRT +E + + VLDGD+D+F+ A + ++ Sbjct: 308 PQDVSFGSQIRNYVLHPYQMVKDLRTEVETSGTAAVLDGDIDEFIDAEIRWRR 360 >gi|224371835|ref|YP_002605999.1| PrfB [Desulfobacterium autotrophicum HRM2] gi|223694552|gb|ACN17835.1| PrfB [Desulfobacterium autotrophicum HRM2] Length = 329 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 157/323 (48%), Positives = 208/323 (64%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 W + A ++ER + + I +I + D LLELA EE+D + +E Sbjct: 1 MIAQEDFWNDPDTATAKLKERTRISDLIETWDKIFAEIEDAETLLELAHEEEDKEVEREV 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 L R+ +V+ +L GE D+ A + ++AGAGGT+SQDW ML RMYTRW +K+ Sbjct: 61 ELQLNRLGQKVKKFSVAIMLDGEDDTKSAIVSINAGAGGTDSQDWTEMLFRMYTRWIDKK 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 K + ++ G+EAGIK T + G +YG LK E GVHRLVRISP+++ +R TSF+S Sbjct: 121 GLKLQMIDYQPGDEAGIKGVTFSVSGEYSYGLLKVESGVHRLVRISPFNAGGKRQTSFAS 180 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 ++VYP + D I +EI E D RID YRASGAGGQHVN T SAVRITH+PTGVVVQCQQE S Sbjct: 181 VFVYPELKDEIRVEIDEGDLRIDVYRASGAGGQHVNKTSSAVRITHLPTGVVVQCQQEPS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QH+NK A +L+++LY+LE +K+ +K +I WG QIRSYVL PY+MVKD RT Sbjct: 241 QHRNKEIAMKVLQSRLYQLEKEKQNRKMQDLHDTKDDIAWGSQIRSYVLHPYRMVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351 + E VLDGDLD F++ TL Sbjct: 301 DYEVGDVDRVLDGDLDQFIEETL 323 >gi|254469263|ref|ZP_05082668.1| peptide chain release factor 2 [Pseudovibrio sp. JE062] gi|211961098|gb|EEA96293.1| peptide chain release factor 2 [Pseudovibrio sp. JE062] Length = 322 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 215/309 (69%), Positives = 260/309 (84%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD++I+ +++++ L DN L+E+ EDD S++ E L+ + +V Q + Sbjct: 1 MRERQQLDDSINGVRKLEQDLVDNQELIEMGEMEDDQSVVDEAEGALKAMLEQVNKLQLQ 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD ND Y+E+++GAGGTESQDWA+MLLRMY RW E+ +K E +E +DGEEAGI Sbjct: 61 SLLSGEADGNDTYIEINSGAGGTESQDWASMLLRMYRRWGEQHGYKVELMEYNDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLL+KG NAYGW+K E GVHRLVRISPYDSN+RRHTSF+S+WVYPV+DDSI IEI+E Sbjct: 121 KSATLLVKGENAYGWMKTEAGVHRLVRISPYDSNARRHTSFASVWVYPVIDDSINIEINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +DCRIDTYRASGAGGQHVNTTDSAVRITH PTG+VVQCQ ERSQHKN+A AW+MLRA+LY Sbjct: 181 ADCRIDTYRASGAGGQHVNTTDSAVRITHNPTGIVVQCQSERSQHKNRATAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E ELQ+REE AN +SKT+IGWG QIRSYVLQPYQ+VKDLRT +E T+PSDVLDGDLD Sbjct: 241 EAELQRREEQANKDAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTAPSDVLDGDLDK 300 Query: 346 FMKATLAIK 354 FM+ATLA + Sbjct: 301 FMEATLAHR 309 >gi|227893185|ref|ZP_04010990.1| peptide chain release factor RF2 [Lactobacillus ultunensis DSM 16047] gi|227865051|gb|EEJ72472.1| peptide chain release factor RF2 [Lactobacillus ultunensis DSM 16047] Length = 332 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 154/324 (47%), Positives = 204/324 (62%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + +A+ L+ + L ++Q D LEL EE D + +ET Sbjct: 1 MAQPDFWNDQEKAQKLINDNNLLKEKRDSFLKLQKGYEDVSTALELLREEPDADLQKETE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++L ++ E + + LLSG+ D+++A LE+H GAGGTE+ DW MLLRMY R+ + Sbjct: 61 NDLANLQEEFHNYELDLLLSGKYDNHNALLEIHPGAGGTEAMDWGQMLLRMYQRYCDSAG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E + GEEAG+KS + I G NAYG LK E GVHRLVRISP+D+ RRHTSF+S+ Sbjct: 121 FKFEINDYEPGEEAGLKSVSARIVGKNAYGMLKSENGVHRLVRISPFDAAKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P VDDSI+I+I D RID YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ Sbjct: 181 EVIPEVDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A N LRAKL+ LE +K+ + + + EIGWG QIRSYV PY +VKDLRT Sbjct: 241 LQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + V+DG L F+ + L Sbjct: 301 YETADVNGVMDGKLQPFIYSYLQW 324 >gi|313891989|ref|ZP_07825590.1| peptide chain release factor 2 [Dialister microaerophilus UPII 345-E] gi|313119632|gb|EFR42823.1| peptide chain release factor 2 [Dialister microaerophilus UPII 345-E] Length = 342 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 153/336 (45%), Positives = 219/336 (65%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + + + + DP W + +A+ + ++ +A ++ +R LL++A+E Sbjct: 4 LKETIRSYDIQMSDPSFWDDSEKARAISQKATQAKDAYETYTKLFERAESLQELLDMAIE 63 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 EDD + + ++ + + K+ E LL+ E D+N+A + HAGAGGTE+QDW ML+ Sbjct: 64 EDDQGMEGDLKQEIEELSAILNKKEIELLLNEEYDTNNAIITFHAGAGGTEAQDWTEMLI 123 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY +WAE + E L + G+EAGIKSA +IKG AYG LK E+GVHRLVRISP+D+ Sbjct: 124 RMYIKWAESEGYGIEELNMLPGDEAGIKSAEYIIKGEFAYGLLKSEKGVHRLVRISPFDA 183 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RRHTSFS++ V P + D IE++++ +D R+D YRASGAGGQHVN T SAVR+TH+PTG Sbjct: 184 AKRRHTSFSAVDVMPEISDDIEVDLNMNDVRVDYYRASGAGGQHVNKTSSAVRMTHLPTG 243 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +V CQ ERSQ +NK Q +LRAKL+ELE++K E++ + + I WG QIRSYV Q Sbjct: 244 IVAACQNERSQTQNKEQCLRILRAKLFELEMKKHEQLKKNIQGEQQAIEWGSQIRSYVFQ 303 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PY +VKD RT +E + V+DGDL+ F++ L K Sbjct: 304 PYTLVKDNRTGVETGNVQAVMDGDLNPFIEGFLKSK 339 >gi|302766928|ref|XP_002966884.1| hypothetical protein SELMODRAFT_87356 [Selaginella moellendorffii] gi|300164875|gb|EFJ31483.1| hypothetical protein SELMODRAFT_87356 [Selaginella moellendorffii] Length = 427 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 168/351 (47%), Positives = 225/351 (64%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++R + + W + + +L L + E P LW + A RE L + + I+E+ Sbjct: 72 VARSMQLVKTRMKWGDVLSKLKDLEKELEKPDLWSDTARASRYSREFGSLSSRVKEIREM 131 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L +N+ L+ELA EE D + E L ++ + K+ +LL E D +LEV Sbjct: 132 ESELVENVDLVELAREEKDEQVEAEAVSALATLRKAAKDKELLALLCEENDGCPCFLEVQ 191 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ES D+A MLLRMY WA +R F+ ++ G+ AGIK ATL ++G AYG+ K Sbjct: 192 AGAGGAESMDFAAMLLRMYKLWALQRGFEAAVVDEMPGDRAGIKRATLRLEGDFAYGFAK 251 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVRISP+D RRHTSF+++ V P+ + EIEI+E+D ID +R+SGAGGQ Sbjct: 252 TEAGVHRLVRISPFDEAGRRHTSFAAVAVIPILDNAGAEIEINEADLVIDRFRSSGAGGQ 311 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSA+RI H PTG+ VQCQ ERSQHKNK A +LR++LY+LEL+++ E Sbjct: 312 HVNTTDSAIRIVHKPTGITVQCQNERSQHKNKDSAMEVLRSRLYQLELKRKTEETAQHTQ 371 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 S EI WG QIRSYVLQPYQ+VKDLRT E T+P+ VLDG LD F+ L+ Sbjct: 372 SLHEISWGNQIRSYVLQPYQIVKDLRTGYEVTNPTAVLDGGLDPFILQYLS 422 >gi|88658024|ref|YP_507510.1| peptide chain release factor 2, programmed frameshift [Ehrlichia chaffeensis str. Arkansas] gi|88599481|gb|ABD44950.1| peptide chain release factor 2, programmed frameshift [Ehrlichia chaffeensis str. Arkansas] Length = 366 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 171/352 (48%), Positives = 237/352 (67%), Gaps = 2/352 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 + L + L + G D DN L+ L+ + LW + A+ ++ ER + ++ Sbjct: 12 VSLGKALQLIRGHLDIDNLTSLLADLSLQCSSTSLWDDNSLAQRILCERARISKTLNSFT 71 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 E+++ LL + D +L E L ++K +V+ K+ E L S EAD ND ++E Sbjct: 72 ELEEEYNYYTELLS-VINNDTDELLNELEAGLAKLKEKVQKKEVECLFSNEADHNDCFIE 130 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGGTES DW++ML RMY RWAE FKTE + DGEE G+KSAT+ + G NAYG Sbjct: 131 IQSGAGGTESNDWSSMLFRMYVRWAEIYHNFKTEIVHKLDGEEVGVKSATIKVIGDNAYG 190 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 W K E G+HRLVRISP++SN++RHT+FSSI V PV+++ IEI + D RIDTYRASGAG Sbjct: 191 WAKTESGIHRLVRISPFNSNAKRHTTFSSILVSPVINEDTNIEILDKDLRIDTYRASGAG 250 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQHVN T+SAVRITHIP+G+VVQCQ RSQH+N A+A N+L+++LY+L+LQ++E+ Sbjct: 251 GQHVNKTESAVRITHIPSGIVVQCQNNRSQHQNLAEAHNLLKSRLYQLKLQEKEKKMAEE 310 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + + IGWG QIRSYV+ PYQMVKD+RT E + + VLDG+LD F+ + L Sbjct: 311 HNKRCNIGWGNQIRSYVMHPYQMVKDIRTGHEVGNVNSVLDGNLDSFIISAL 362 >gi|291456213|ref|ZP_06595603.1| peptide chain release factor 2 [Bifidobacterium breve DSM 20213] gi|291381490|gb|EFE89008.1| peptide chain release factor 2 [Bifidobacterium breve DSM 20213] Length = 374 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 137/353 (38%), Positives = 208/353 (58%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + + D D + L + P LW N A+ + + ++ + + Sbjct: 12 EARAKYDSIAKALDVDRLKADIKDLEAQAAAPGLWDNPDNAQKITSKLSAAESQLKRLTS 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 R+ D L+EL EE D L E + + I+ +++ + ++LL GE D A + + Sbjct: 72 ASQRIDDVETLVELGQEEQDQESLDEAQNEIGEIQKDLDQMEIQTLLDGEYDERSAVVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A MLLRMY R+ E+ FK + ++ EEAGIKSAT + P AYG L Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+V+ + ++I ++D R+DTY +SG GGQ Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHVDIPDTDIRVDTYCSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTT SAVRITH+PTG+VV Q ERSQ +N+A A +L+++L L ++ + Sbjct: 252 GVNTTYSAVRITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVLRHEEEAKKKKELAG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD+++F++A + + Sbjct: 312 D-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINNFIEAGIRWR 363 >gi|199597236|ref|ZP_03210667.1| Protein chain release factor B [Lactobacillus rhamnosus HN001] gi|229551742|ref|ZP_04440467.1| peptide chain release factor RF2 [Lactobacillus rhamnosus LMS2-1] gi|258539140|ref|YP_003173639.1| peptide chain release factor B-like protein [Lactobacillus rhamnosus Lc 705] gi|199591752|gb|EDY99827.1| Protein chain release factor B [Lactobacillus rhamnosus HN001] gi|229314873|gb|EEN80846.1| peptide chain release factor RF2 [Lactobacillus rhamnosus LMS2-1] gi|257150816|emb|CAR89788.1| Peptide chain release factor 2 [Lactobacillus rhamnosus Lc 705] Length = 332 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 149/325 (45%), Positives = 210/325 (64%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + A+ ++ L +++ L D LEL +E D + E Sbjct: 1 MAEPGFWDDSEAAQKVIDANNKLKEKHDRFYALENELEDLEAGLELLQDEPDPDLQHEEE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L+ ++ +++ + + LL+G D N+A LE+H GAGGTESQDW +ML+RMY RWA++ Sbjct: 61 TKLKDLQEKLDQYEMQLLLNGPYDHNNAILEIHPGAGGTESQDWGSMLMRMYQRWADQNG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E + G+EAGIKS TLLI G NAYG LK E+GVHRLVRISP+DS RRHTSF+S+ Sbjct: 121 FKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEKGVHRLVRISPFDSAGRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D+SIE++I D +++ +R+SGAGGQH+N T SAVR+ H+PTG+V Q +RSQ Sbjct: 181 DVMPELDNSIEVDIRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHLPTGIVTSSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NKA A ML+AKLY+ E + ++ A + + ++ +G QIRSYV PY MVKD RTN Sbjct: 241 FQNKATAMAMLKAKLYQREEEAKKAKAKAIQGEQKDVAFGSQIRSYVFHPYTMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDL+ F+ A L + Sbjct: 301 YETGNGQAVMDGDLNPFINAYLQWE 325 >gi|302755404|ref|XP_002961126.1| hypothetical protein SELMODRAFT_75160 [Selaginella moellendorffii] gi|300172065|gb|EFJ38665.1| hypothetical protein SELMODRAFT_75160 [Selaginella moellendorffii] Length = 427 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 168/351 (47%), Positives = 225/351 (64%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++R + + W + + +L L + E P LW + A RE L + + I+E+ Sbjct: 72 VARSMQLVKTRMKWGDVLSKLKDLEKELEKPDLWSDTARASRYSREFGSLSSRVKEIREM 131 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L +N+ L+ELA EE D + E L ++ + K+ +LL E D +LEV Sbjct: 132 ESELVENVDLVELAREEKDEQVEAEAVSALATLRKAAKDKELLALLCEENDGCPCFLEVQ 191 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ES D+A MLLRMY WA +R F+ ++ G+ AGIK ATL ++G AYG+ K Sbjct: 192 AGAGGAESMDFAAMLLRMYKLWALQRGFEAAVVDEMPGDRAGIKRATLRLEGDFAYGFAK 251 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVRISP+D RRHTSF+++ V P+ + EIEI+E+D ID +R+SGAGGQ Sbjct: 252 TEAGVHRLVRISPFDEAGRRHTSFAAVAVIPILDNAGAEIEINEADLVIDRFRSSGAGGQ 311 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSA+RI H PTG+ VQCQ ERSQHKNK A +LR++LY+LEL+++ E Sbjct: 312 HVNTTDSAIRIVHKPTGITVQCQNERSQHKNKDSAMEVLRSRLYQLELKRKTEETAQHTQ 371 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 S EI WG QIRSYVLQPYQ+VKDLRT E T+P+ VLDG LD F+ L+ Sbjct: 372 SLHEISWGNQIRSYVLQPYQIVKDLRTGYEVTNPTAVLDGGLDPFILQYLS 422 >gi|297171212|gb|ADI22220.1| protein chain release factor B [uncultured Gemmatimonadales bacterium HF0200_34B24] gi|297171327|gb|ADI22332.1| protein chain release factor B [uncultured actinobacterium HF0500_01C15] Length = 325 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 167/324 (51%), Positives = 222/324 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + A+ ++ E L + K + + + L EL EE+D + E Sbjct: 1 MAEPGFWDDQESARAVIDESNRLKGWVEPWKALAGKGSELEALAELLEEEEDAELAGEFE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L ++ VE + +++L G+ D +A + +H GAGG ESQDWA ML+RMYTRWAE+R Sbjct: 61 EELAVLQKSVEALELKTMLRGDEDHREAIVTLHPGAGGLESQDWAQMLMRMYTRWAERRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ L++ +EAGIKSATL IKG + YG+LK E+GVHRLVRISP+D+ SRRHTSF+S+ Sbjct: 121 FQVNVLDLQPAQEAGIKSATLEIKGESVYGYLKAERGVHRLVRISPFDAQSRRHTSFTSV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 +VYP+V+D IE+EI+E+D RIDTYRASGAGGQHVN TDSAVRITH PT +VV CQQERSQ Sbjct: 181 FVYPLVEDDIEVEINEADLRIDTYRASGAGGQHVNKTDSAVRITHEPTNIVVSCQQERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 HKN++ A MLRA LY+ L+++E+ E SK +IG+G QIRSYV QPY MV D RT Sbjct: 241 HKNRSTAMKMLRAALYQRALEEKEKEKAAIEESKADIGFGSQIRSYVFQPYTMVNDHRTE 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 + V+DGDLD ++A L Sbjct: 301 TKIGDVHGVMDGDLDPLIEAYLKQ 324 >gi|254458681|ref|ZP_05072105.1| peptide chain release factor 2 [Campylobacterales bacterium GD 1] gi|207084447|gb|EDZ61735.1| peptide chain release factor 2 [Campylobacterales bacterium GD 1] Length = 369 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 176/352 (50%), Positives = 233/352 (66%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ ++N + G+ + D RL + D W + A + +E+ L + Sbjct: 13 LNLKMNNITGVVEPDKLTSRLEEIEELENDQDFWNDADNAAKIQKEKTQLQRKLDKYSIA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 +D + D L L E+A EE+D ++ + ++ + + E LLSGE DSN+A L +H Sbjct: 73 KDAITDALELYEMAKEENDEDSIELCFSDASDLEQLILNMEVEVLLSGETDSNNAILSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA MLLRMY RWAE+ F E L+ G+EAGIK A++LIKG NAYG+LK Sbjct: 133 PGAGGTESQDWAEMLLRMYKRWAERHGFGVEVLDYQVGDEAGIKDASILIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVRISP+DSN++RHTSFSS+ V P +DD I I + + D RIDTYRASGAGGQH Sbjct: 193 VENGIHRLVRISPFDSNAKRHTSFSSVMVSPEIDDDINIVVEDKDIRIDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SA+RITHI T V+VQCQ +RSQHKNKA A MLR++LYELEL ++ Sbjct: 253 VNKTESAIRITHIATNVIVQCQNDRSQHKNKATAMKMLRSRLYELELAAQKAEIAGIA-- 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYV+QPYQ VKD R+N ++ S +LDGD+D ++ L + Sbjct: 311 KSEIGWGHQIRSYVMQPYQQVKDTRSNEAYSNVSGILDGDIDKMIEGVLIAQ 362 >gi|121534882|ref|ZP_01666701.1| peptide chain release factor 1 [Thermosinus carboxydivorans Nor1] gi|121306481|gb|EAX47404.1| peptide chain release factor 1 [Thermosinus carboxydivorans Nor1] Length = 356 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 120/351 (34%), Positives = 182/351 (51%), Gaps = 11/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + L DP + N E + + L ++ +E + L Sbjct: 1 MLDKLQAIEDKYLELENLISDPDIIANQSEWQKHAKAHAKLTEIVTKFREYKKVLQGMDD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 E+ E+ D + L +K + + L D + +E+ AGAGG Sbjct: 61 AREMLKEKLDDDFREMVEAELAELKAKCVRLEEELRILMLPKDPNDEKNVIIEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR+AE + ++ E L+ + + G K I+G AY K E GV Sbjct: 121 DEAALFAGDLFRMYTRYAEAQGWRVELLDANSSDLGGFKEVVFSIQGDGAYSRFKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +++ R HTS ++ V P DD ++ I+ SD RIDTY ASGAGGQHVN T+ Sbjct: 181 HRVQRVPETEASGRIHTSTVTVAVLPEADDVDDVVINPSDLRIDTYCASGAGGQHVNKTE 240 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VVQCQ E+SQ KN+ +A +LRAKL LE + E+ A + ++ K+++G Sbjct: 241 SAVRITHLPTGIVVQCQDEKSQIKNREKAMRVLRAKL--LEAAQEEQRAQLAQTRKSQVG 298 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L+GDLD+ + A + + Sbjct: 299 TGDRSERIRTYNF-PQGRVTDHRIGLTLHKLDFILNGDLDELINALVTADQ 348 >gi|15602055|ref|NP_245127.1| peptide chain release factor 2 [Pasteurella multocida subsp. multocida str. Pm70] gi|12720411|gb|AAK02274.1| PrfB [Pasteurella multocida subsp. multocida str. Pm70] Length = 320 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 168/318 (52%), Positives = 226/318 (71%), Gaps = 1/318 (0%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W +A+ L +ER L+ ++ I + L D LLELA+E +D + E L+ + Sbjct: 2 WNEPEKAQALGKERVALEGVVNTIHTLDQGLEDVEGLLELAIEAEDEATFHEAVAELEEL 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + ++ +F + SG+ D+ D Y+++ AG+GGTE+QDW MLLRMY RWAE + FKTE + Sbjct: 62 EQQLAKLEFRRMFSGQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELM 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E+ DG+ AGIKSAT+ + G A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP + Sbjct: 122 EVSDGDVAGIKSATIKVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEI 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DD I+I+I+ +D RID YRASGAGGQHVN T+SAVRITHIP+G+VVQCQ +RSQHKNK Q Sbjct: 182 DDDIDIDINPADLRIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNDRSQHKNKDQ 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 L+AKLYE+ELQK+ E +K++IGWG QIRSYVL +KDLRT +E + Sbjct: 242 CMKQLKAKLYEMELQKKNADKQAMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNT 300 Query: 336 SDVLDGDLDDFMKATLAI 353 VLDGDLD F++A+L Sbjct: 301 QAVLDGDLDRFIEASLKA 318 >gi|227889611|ref|ZP_04007416.1| peptide chain release factor RF2 [Lactobacillus johnsonii ATCC 33200] gi|268319827|ref|YP_003293483.1| Peptide chain release factor 2 [Lactobacillus johnsonii FI9785] gi|227849754|gb|EEJ59840.1| peptide chain release factor RF2 [Lactobacillus johnsonii ATCC 33200] gi|262398202|emb|CAX67216.1| Peptide chain release factor 2 [Lactobacillus johnsonii FI9785] Length = 332 Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats. Identities = 150/324 (46%), Positives = 209/324 (64%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N +A+ L+ + + K+++ + D LEL + D + +E S Sbjct: 1 MAEPGFWDNQEQAQSLINDTNRMKEKSENFKQLEAKFDDAQTALELLKADPDPELSEELS 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + + + LLS + D ++A +E+H GAGGTE+ DWA+MLLRMY R+A Sbjct: 61 EEMVSLSQSFHDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAASHD 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 K E + GEEAG+KS ++ I+G NA+G LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 121 LKFEIEDYEPGEEAGVKSVSIRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D SIE++I+ D RID YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ Sbjct: 181 EVIPEIDQSIEVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A NMLRAKL++LE +K+ + + ++ EIG+G QIRSYV PY MVKD RTN Sbjct: 241 LQNRETAMNMLRAKLFQLEEEKKRKQTEELKGNQKEIGFGSQIRSYVFHPYNMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + + V+DG LD+F+ A L Sbjct: 301 FETSDVNGVMDGKLDNFIYAYLQW 324 >gi|260775420|ref|ZP_05884317.1| peptide chain release factor 2 [Vibrio coralliilyticus ATCC BAA-450] gi|260608601|gb|EEX34766.1| peptide chain release factor 2 [Vibrio coralliilyticus ATCC BAA-450] Length = 320 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 168/317 (52%), Positives = 228/317 (71%), Gaps = 1/317 (0%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W A+ L +ER L+ + I +++ + D LLELA+EE+D E L + Sbjct: 2 WNEPERAQALGKERSALEAVVETIDQLEQGVEDVDGLLELAVEEEDQETFDEIEPELAEL 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + ++E +F + SG+ D++D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FKTE + Sbjct: 62 EAKLEKLEFRRMFSGDHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEVI 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E+ +GE AG+K AT+ I G AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP + Sbjct: 122 EVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEI 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DD+I+I+I+ SD RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK Q Sbjct: 182 DDNIDIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQ 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A LRAKL+ELE+QK+ E +K++IGWG QIRSYVL +KDLRT++E + Sbjct: 242 AMKQLRAKLFELEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTSVENRNT 300 Query: 336 SDVLDGDLDDFMKATLA 352 VLDGDLD F++A+L Sbjct: 301 QAVLDGDLDKFIEASLK 317 >gi|147669189|ref|YP_001214007.1| peptide chain release factor 2 [Dehalococcoides sp. BAV1] gi|146270137|gb|ABQ17129.1| bacterial peptide chain release factor 2 (bRF-2) [Dehalococcoides sp. BAV1] Length = 356 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 147/340 (43%), Positives = 208/340 (61%), Gaps = 2/340 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 FD ++ L T + +P WQ+ A+ M++ + ++ R+ D L Sbjct: 14 FDVSAKELEITELETASSNPDFWQDQQNAQKAMKKLAANKRTSELWRGLERRINDLTELA 73 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 L +D S+ E + + E++ + SG+ D+ +A L VHAGAGG ESQDW Sbjct: 74 VL--SREDPSLSNEIEHEISGLTAELDSLEVGLAFSGQYDNRNALLTVHAGAGGVESQDW 131 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRM+ RWAEK+ F E L+ GEEAGIKSATL I+G AYG+LK E GVHRL+R+ Sbjct: 132 AGMLLRMFMRWAEKKGFGMEILDQSPGEEAGIKSATLQIEGEYAYGFLKSEHGVHRLIRL 191 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+D++ RHTSF+ + + P +DS++I+I D +ID +R+SG GGQ+V +AVR+T Sbjct: 192 SPFDADHARHTSFALVEIMPEAEDSVDIDIKPEDIKIDMFRSSGPGGQNVQKVSTAVRVT 251 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIP+G+VV Q ERSQH+N+ A +L +KL +E+ KR E + + WG QIR Sbjct: 252 HIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKLKGERISAEWGSQIR 311 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 SYVL PY+MVKD RT+ E + VL+G+LD F+ A L Sbjct: 312 SYVLHPYKMVKDHRTDYEVGNAEAVLEGELDGFISAYLRQ 351 >gi|119358306|ref|YP_912950.1| peptide chain release factor 2 [Chlorobium phaeobacteroides DSM 266] gi|119355655|gb|ABL66526.1| bacterial peptide chain release factor 2 (bRF-2) [Chlorobium phaeobacteroides DSM 266] Length = 363 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 150/345 (43%), Positives = 216/345 (62%), Gaps = 1/345 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 GG+FD D +++ L T DP W + EA ++E + +++ Sbjct: 16 TSYGGIFDVDERKEKIDDLEKITADPGFWNDQQEANRTLKELSEHKSWTGAFDKLEAAAK 75 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + L +A E D S E ++ I+ + +F ++LSG+ D +A + +HAGAGG Sbjct: 76 TSGEELTIADELQDESFADELIASIAAIESGIAAIEFRNMLSGKDDPGNAIITIHAGAGG 135 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDWA ML RMY RWAE++ FK + +G+ AGIK+ATL I+GP AYG+LK E GV Sbjct: 136 TEAQDWAEMLYRMYMRWAERKGFKVFTDDYQEGDGAGIKTATLEIQGPYAYGYLKAENGV 195 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR+SP+DSN+RRHTSF+S++ YP +EI++ + D + T+R+ G GGQ+VN + Sbjct: 196 HRLVRVSPFDSNARRHTSFASVYTYPEAPPDVEIDVRKEDLELSTFRSGGKGGQNVNKVE 255 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 +AVRI HIP+G+VV CQQERSQ +N+ +A ML A+LY+ + ++ + E K +I Sbjct: 256 TAVRIKHIPSGIVVGCQQERSQFQNRERAMKMLMAQLYQRQREEEDARKREIEGKKKKIE 315 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL + +KD RTN E+ VLDGDLD FM+ L+ Sbjct: 316 WGSQIRSYVLDD-RRIKDHRTNYERFDVETVLDGDLDTFMEKYLS 359 >gi|171741050|ref|ZP_02916857.1| hypothetical protein BIFDEN_00116 [Bifidobacterium dentium ATCC 27678] gi|283455565|ref|YP_003360129.1| peptide chain release factor 2 [Bifidobacterium dentium Bd1] gi|171276664|gb|EDT44325.1| hypothetical protein BIFDEN_00116 [Bifidobacterium dentium ATCC 27678] gi|283102199|gb|ADB09305.1| prfB Bacterial Peptide Chain Release Factor 2 (RF-2) [Bifidobacterium dentium Bd1] Length = 380 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 138/353 (39%), Positives = 211/353 (59%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + D D + L + +P LW + A+ + + + + + + Sbjct: 16 EARAKYESISKALDVDRLTAQAKELEVQAAEPGLWDDPENAQKITSKLSAVQSQLKRLSS 75 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 R+ D L+EL EE+D L+E + ++ I+ +++ + ++LL GE D A + + Sbjct: 76 ASQRIDDVETLVELGREEEDADTLEEAKNEIEGIRHDLDDMEIQTLLDGEYDERSAVVTI 135 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A MLLRMY RWAE+ +K + ++ EEAGIKSAT + P AYG + Sbjct: 136 RSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRM 195 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+V+ + I++ +S+ R+DTY +SG GGQ Sbjct: 196 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQ 255 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTT SAVRITHIPTG+VV Q ERSQ +N+A A +L+++L L ++ + Sbjct: 256 GVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHEEEAKKKKELAG 315 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD+D F++A + + Sbjct: 316 D-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAGIRWR 367 >gi|42518772|ref|NP_964702.1| peptide chain release factor 2 [Lactobacillus johnsonii NCC 533] gi|41583058|gb|AAS08668.1| peptide chain release factor 2 (RF-2) [Lactobacillus johnsonii NCC 533] Length = 332 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 149/324 (45%), Positives = 209/324 (64%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N +A+ L+ + + K+++ + D LEL + D + +E S Sbjct: 1 MAEPGFWDNQEQAQSLINDTNRMKEKSENFKQLEAKFDDAQTALELLKADPDPELSEELS 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + + + LLS + D ++A +E+H GAGGTE+ DWA+MLLRMY R+A Sbjct: 61 EEMVSLSQSFHDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAVSHD 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 K E + GEEAG+KS ++ I+G NA+G LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 121 LKFEIEDYEPGEEAGVKSVSIRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D SIE++I+ D RID YR+SGAGGQH+N T SAVRITH+PTG++ Q +RSQ Sbjct: 181 EVIPEIDQSIEVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIITSSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A NMLRAKL++LE +K+ + + ++ EIG+G QIRSYV PY MVKD RTN Sbjct: 241 LQNRETAMNMLRAKLFQLEEEKKRKQTEELKGNQKEIGFGSQIRSYVFHPYNMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + + V+DG LD+F+ A L Sbjct: 301 FETSDVNGVMDGKLDNFIYAYLQW 324 >gi|212716462|ref|ZP_03324590.1| hypothetical protein BIFCAT_01386 [Bifidobacterium catenulatum DSM 16992] gi|212660715|gb|EEB21290.1| hypothetical protein BIFCAT_01386 [Bifidobacterium catenulatum DSM 16992] Length = 376 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 139/353 (39%), Positives = 208/353 (58%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + D D + L + +P LW + A+ + + + + + + Sbjct: 12 EARAKYESISKALDVDRLTAQAKDLEVQAAEPGLWDDPENAQKVTSKLSAVQSQLKRLSS 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 R+ D L+EL EEDD L E ++ I+ ++ + ++LL GE D A + + Sbjct: 72 ASQRIDDVETLVELGQEEDDADTLAEARSEVESIQNDLADMEIQTLLDGEYDERSAVVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A MLLRMY RWAE+ +K + ++ EEAGIKSAT + P AYG + Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRM 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+V+ + I++ +S+ R+DTY +SG GGQ Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTT SAVRITHIPTG+VV Q ERSQ +N+A A +L+++L L ++ + Sbjct: 252 GVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHEEEAKKKKELAG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD+D F++A + + Sbjct: 312 D-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAGIRWR 363 >gi|270307933|ref|YP_003329991.1| peptide chain release factor 2 [Dehalococcoides sp. VS] gi|270153825|gb|ACZ61663.1| peptide chain release factor 2 [Dehalococcoides sp. VS] Length = 357 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 147/353 (41%), Positives = 208/353 (58%), Gaps = 2/353 (0%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 M L + FD ++ L + P WQ+ A+ +M++ + Sbjct: 1 MNLRAAFFLIWCDFDVSAKELEITELENASASPDFWQDQQNAQRVMKKLAANKRTSELWR 60 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 ++ R+ D L L +D S+ E + + E+ + SG+ D+ +A L Sbjct: 61 GLERRVNDLTELAVL--SYEDPSLSNEIEHEISGLTAELNSLEVGLAFSGQYDNRNALLT 118 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 VHAGAGG ESQDWA MLLRM+ RWAEK+ F E L+ GEEAG+KSATL I G AYG+ Sbjct: 119 VHAGAGGVESQDWAGMLLRMFMRWAEKKGFGMEILDQSPGEEAGVKSATLQIDGEYAYGF 178 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E GVHRL+R+SP+D++ RHTSF+ + + P +DS++I+I D +I+ +R+SG GG Sbjct: 179 LKSEHGVHRLIRLSPFDADHARHTSFALVEIMPEAEDSVDIDIKPEDIKIEMFRSSGPGG 238 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q+V +AVRITHIP+G+VV Q ERSQH+N+ A +L +KL +E+ KR E + Sbjct: 239 QNVQKVSTAVRITHIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKLK 298 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + WG QIRSYVL PY+MVKD RT+ E + VL+G+LD F+ A L Sbjct: 299 GERISAEWGNQIRSYVLHPYKMVKDHRTDYEVGNAETVLEGELDGFINAYLRQ 351 >gi|114561768|ref|YP_749281.1| peptide chain release factor 2 [Shewanella frigidimarina NCIMB 400] gi|114333061|gb|ABI70443.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella frigidimarina NCIMB 400] Length = 320 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 161/317 (50%), Positives = 219/317 (69%), Gaps = 1/317 (0%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W A+ L +ER L + I ++ L D LLELA+EEDD + + L+ + Sbjct: 2 WNEPERAQALGKERAALVVVVKTIDDMDTGLEDIQGLLELAIEEDDEETFNDAAAELEEL 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + +F + SG++D+++ YL++ +G+GGTE+QDWANM+LRMY RW + + E + Sbjct: 62 DTRLADLEFRRMFSGKSDASNCYLDIQSGSGGTEAQDWANMVLRMYLRWGDAHGYSPELM 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E+ DG+ AGIK AT+ G A+GW++ E GVHRLVR SP+DS+ +RHTSF S++VYP + Sbjct: 122 EVTDGDVAGIKGATIKFTGEYAFGWMRTETGVHRLVRKSPFDSSGKRHTSFCSVFVYPEI 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DD IEI+I+ SD RIDTYRASGAGGQHVN TDSA+RITH+PT VVQCQ +RSQHKN+ Sbjct: 182 DDDIEIDINPSDLRIDTYRASGAGGQHVNKTDSAIRITHLPTNTVVQCQNDRSQHKNRDS 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A+ L+AKLYELE+ K+ E +K++IGWG QIRSYVL +KDLRT +E + Sbjct: 242 AFKQLKAKLYELEMHKQNADKQAAEDAKSDIGWGSQIRSYVLDD-ARIKDLRTGVENRNT 300 Query: 336 SDVLDGDLDDFMKATLA 352 VLDGDLD F++A+L Sbjct: 301 QTVLDGDLDKFIEASLK 317 >gi|326330854|ref|ZP_08197155.1| peptide chain release factor 2 [Nocardioidaceae bacterium Broad-1] gi|325951384|gb|EGD43423.1| peptide chain release factor 2 [Nocardioidaceae bacterium Broad-1] Length = 372 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 154/354 (43%), Positives = 218/354 (61%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + +G + D D + ++ L + P LW + A + L ++ E Sbjct: 12 QLQATMQTIGQVLDLDAMRKEIADLGEQVAAPDLWDDQDNATRVTGRLSLLQGELNKFTE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + R+ D +++E+A EE D L E+ L R+K VE + +LLSGE DS +A + + Sbjct: 72 LSSRIEDLELMVEMAQEEGDADTLAESEAELGRVKKAVESLEIRTLLSGEYDSREALVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A ML+RMY RWAE+ K+ E + EEAG+KSAT I P AYG L Sbjct: 132 RSGAGGVDAADFAEMLMRMYVRWAERNKYPVEVFDTSYAEEAGLKSATFAIHAPYAYGTL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V PV++ + EIEI E+D ++D YR+SG GGQ Sbjct: 192 SVEAGTHRLVRISPFDNQGRRQTSFAAVEVVPVLEQTDEIEIDENDIKVDVYRSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG VV CQ E+SQ +NKA A +L+AKL L+ + E + Sbjct: 252 SVNTTDSAVRLTHIPTGTVVSCQNEKSQLQNKAAAMIVLKAKLLALKKAEEEAQLKELKG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+R+YVL PYQ+VKDLRT E +P V DGD+D F++A + ++ Sbjct: 312 D-VAASWGDQMRNYVLNPYQIVKDLRTTYEVGNPQAVFDGDIDGFLEAGIRWRR 364 >gi|169832218|ref|YP_001718200.1| peptide chain release factor 2 [Candidatus Desulforudis audaxviator MP104C] gi|169639062|gb|ACA60568.1| peptide chain release factor 2 [Candidatus Desulforudis audaxviator MP104C] Length = 330 Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats. Identities = 158/325 (48%), Positives = 208/325 (64%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P WQ A+ + R L + ++ D +LLEL E +D +E Sbjct: 1 METPDFWQQQERAQEVTRRLAGLRQQVEVFDTLRRDFEDAAVLLELGEEIEDPDTAREVE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +L + V + E LLSG D +A L +HAGAGG E+QDW ML RMY RWAEKR Sbjct: 61 RSLAELGRRVAALELELLLSGPYDEANAILSLHAGAGGLEAQDWVEMLFRMYLRWAEKRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + E L+I +EAG+K+ T L+ GP AYG+L+ E+GVHRLVRISP+D+ RRHTSF+S+ Sbjct: 121 YAVEVLDILPDDEAGLKNVTFLVSGPMAYGYLRAEKGVHRLVRISPFDAGGRRHTSFASL 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P V ++ I+I+ D RIDTYR+ GAGGQHVN TDSAVRITH+PTG+VV CQ ERSQ Sbjct: 181 DVLPEVAENTAIDINPEDLRIDTYRSGGAGGQHVNKTDSAVRITHLPTGIVVSCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 N+ A +L+A+L +LEL++REE + +I WG QIRSYV PY MVKD RT Sbjct: 241 IANRNAAMKLLKARLLDLELRRREEEIAALRGEQPDIAWGSQIRSYVFHPYSMVKDHRTK 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 EK + V+DG++D+F++A L K Sbjct: 301 FEKGNVDAVMDGEIDEFIQAYLVWK 325 >gi|258507895|ref|YP_003170646.1| peptide chain release factor 2 [Lactobacillus rhamnosus GG] gi|257147822|emb|CAR86795.1| Peptide chain release factor 2 [Lactobacillus rhamnosus GG] gi|259649221|dbj|BAI41383.1| protein chain release factor B [Lactobacillus rhamnosus GG] Length = 332 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 149/325 (45%), Positives = 211/325 (64%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + A+ ++ L +++ L D LEL +E D + +E Sbjct: 1 MAEPGFWDDSEAAQKVIDANNKLKEKHDRFYALENELEDLEAGLELLQDEPDPDLQREEE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L+ ++ +++ + + LL+G D N+A LE+H GAGGTESQDW +ML+RMY RWA++ Sbjct: 61 TKLKDLQEKLDQYEMQLLLNGPYDHNNAILEIHPGAGGTESQDWGSMLMRMYQRWADQNG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E + G+EAGIKS TLLI G NAYG LK E+GVHRLVRISP+DS RRHTSF+S+ Sbjct: 121 FKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEKGVHRLVRISPFDSAGRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D+SIE++I D +++ +R+SGAGGQH+N T SAVR+ H+PTG+V Q +RSQ Sbjct: 181 DVMPELDNSIEVDIRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHLPTGIVTSSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NKA A ML+AKLY+ E + ++ A + + ++ +G QIRSYV PY MVKD RTN Sbjct: 241 FQNKATAMAMLKAKLYQREEEAKKAKAKAIQGEQKDVAFGSQIRSYVFHPYTMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDL+ F+ A L + Sbjct: 301 YETGNGQAVMDGDLNPFINAYLQWE 325 >gi|315606122|ref|ZP_07881153.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 180 str. F0310] gi|315312404|gb|EFU60490.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 180 str. F0310] Length = 372 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 139/355 (39%), Positives = 213/355 (60%), Gaps = 3/355 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + D ++++ LN K P LW + A+ + H + + I ++ Sbjct: 12 LRTTMDNIVAVVQPDKLREQIAELNEKAAAPDLWDDPSAAQEVTSALSHRQSELDRITQM 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSNDAYLE 120 +R+ D ++E+A E+ D K ++ + +LL GE D +A + Sbjct: 72 SERIDDLEAMVEMAAEDPDEGAEILAEAEGDLEKLRKDLGDLEIRTLLDGEYDERNAVIT 131 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + +GAGG ++ D+A +LLRMY RWAE+ + T+ ++ EEAG+KSAT ++ P AYG Sbjct: 132 IRSGAGGVDAADFAEILLRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVQAPYAYGT 191 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L E G HRLVRISP+D+ RR TSF+++ V P+++ + IEI ES+ ++D +R+SG GG Sbjct: 192 LSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIETTDHIEIPESELKVDVFRSSGPGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L L ++ + Sbjct: 252 QSVNTTDSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVLRHEEEQAKKKELA 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVLQPYQMVKDLRT E +P V DGD+D F+ A + +K Sbjct: 312 GD-VKASWGDQMRSYVLQPYQMVKDLRTEFESGNPQSVFDGDIDGFINAGIRWRK 365 >gi|308176991|ref|YP_003916397.1| peptide chain release factor 2 [Arthrobacter arilaitensis Re117] gi|307744454|emb|CBT75426.1| peptide chain release factor 2 [Arthrobacter arilaitensis Re117] Length = 371 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 147/352 (41%), Positives = 217/352 (61%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + D D ++ L+ + P+LW + A+++ + H + + + + Sbjct: 13 LRSTFSAIEDVSDVDQIKADIAVLSEEAGVPNLWDDPAAAQIVTSKLSHRQSELERLTRL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L+ELA EDD L E L I+ + + +LLSGE DS A + + Sbjct: 73 RTRIDDLEVLVELAELEDDADTLDEAEKELVSIQKSLADLEIVTLLSGEFDSRGAVVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ D+A MLLRMY RWAE+R +K ++ EEAG+KSAT I P A+G L Sbjct: 133 SGAGGVDAADFAEMLLRMYLRWAERRGYKATVMDTSYAEEAGLKSATFEIDAPYAFGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ + IEI ES+ R+D +R+SG GGQ Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIEQTDTIEIPESEIRVDVFRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTGVVV Q E+SQ +N+A A +L+++L L+ ++ + Sbjct: 253 VNTTDSAVRMTHIPTGVVVSMQNEKSQIQNRAAALRVLQSRLLLLKKEQEDAQKKEFAGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + VLDG++DDF+ A + + Sbjct: 313 -VKATWGDQMRSYVLNPYQMVKDLRTEHEVGNTQAVLDGEIDDFIDAGIRWR 363 >gi|21242619|ref|NP_642201.1| peptide chain release factor 2 [Xanthomonas axonopodis pv. citri str. 306] gi|21108083|gb|AAM36737.1| peptide chain release factor 2 [Xanthomonas axonopodis pv. citri str. 306] Length = 329 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 171/318 (53%), Positives = 223/318 (70%), Gaps = 1/318 (0%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W + A+ L RER L+ + I ++ L D LLELA E D +L Sbjct: 2 WNDAERAQALGRERSMLEKTVIGIADVLSGLADAGDLLELAESEQDEDTAVAVIADLDNY 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + VE +F+ + SG+ D +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE + Sbjct: 62 QAHVEKLEFQRMFSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTELM 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E+ GE AGIKSAT+ I+G AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P V Sbjct: 122 EVSGGEVAGIKSATVRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEV 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT VV CQ RSQH+N+ Sbjct: 182 DDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRDN 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A ML AKLYELE+QKR + E++K++IGWG QIR+YVL +KDLRT IE++ Sbjct: 242 AMKMLAAKLYELEVQKRNAEKDALEATKSDIGWGSQIRNYVLD-QSRIKDLRTGIERSDT 300 Query: 336 SDVLDGDLDDFMKATLAI 353 VLDGDLD+F++A+L Sbjct: 301 QKVLDGDLDEFVEASLKA 318 >gi|331270416|ref|YP_004396908.1| peptide chain release factor 2 [Clostridium botulinum BKT015925] gi|329126966|gb|AEB76911.1| peptide chain release factor 2 [Clostridium botulinum BKT015925] Length = 327 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 164/326 (50%), Positives = 229/326 (70%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++ + W ++ +A+ + +E + L + I ++RL D IL+E+++EEDD S ++E Sbjct: 1 MQESNFWDDINKAQEVTQEAKGLKDRIDKYSNTKNRLEDLKILIEMSIEEDDESSVEEIL 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + ++ I++ ++ + + LLSGE D N+A + +HAGAGGT++QDW MLLRMYTRW+E + Sbjct: 61 NEVKEIQIIIDEFRVQILLSGEYDKNNAIVSLHAGAGGTDAQDWTEMLLRMYTRWSETKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K E L+I G+EAGIKSA+L I G AYG+LK E+G+HRLVRISP+++N +R TSF+S+ Sbjct: 121 YKVETLDILPGDEAGIKSASLKITGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASL 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + P + +S +IEI D RIDTYRASGAGGQH+N TDSAVRITHIPTG+VVQ Q ERSQ Sbjct: 181 EILPELTESQDIEIKSDDLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQSQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK A +ML++KL EL+ + +E EIGWG QIRSYV QPY MVKD RTN Sbjct: 241 FQNKDTAMSMLKSKLVELKERAHKEKIEDLSGDLKEIGWGSQIRSYVFQPYTMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355 E + V+DGD+D F+ L K Sbjct: 301 TEMGNVEAVMDGDIDIFIIEYLKANK 326 >gi|296446781|ref|ZP_06888719.1| peptide chain release factor 2 [Methylosinus trichosporium OB3b] gi|296255656|gb|EFH02745.1| peptide chain release factor 2 [Methylosinus trichosporium OB3b] Length = 322 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 202/309 (65%), Positives = 248/309 (80%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRER +++ + I ++ L D L L+EL E+D +E L+ + + +Q E Sbjct: 1 MRERTQIEDQLGAIARLERDLDDALTLVELGESENDADTEKEGIAQLEALLKDARERQIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +L SGEAD ND Y+EVH+GAGGTES DWA ML RMY RWAE++KFK E +E G+EAGI Sbjct: 61 ALFSGEADGNDTYIEVHSGAGGTESCDWARMLFRMYARWAERKKFKVEVIEETSGDEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLLIKG NA+GW K E GVHRLVRISP+DSN+RRHTSF+S+WVYPVVDD I+I+++E Sbjct: 121 KSATLLIKGMNAHGWAKTESGVHRLVRISPFDSNARRHTSFASVWVYPVVDDKIDIQVNE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYR+SGAGGQHVNTTDSA+RITHIP+G+VV CQ ERSQHKN+A AWNMLRA+LY Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAIRITHIPSGIVVACQAERSQHKNRATAWNMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KRE AN E+SKT+IGWG QIRSYVLQPYQ+VKDLRT +PS+VLDG+LDD Sbjct: 241 EMELKKREAEANAVEASKTDIGWGHQIRSYVLQPYQLVKDLRTGHTSGTPSEVLDGELDD 300 Query: 346 FMKATLAIK 354 FM+A+LA + Sbjct: 301 FMQASLAQR 309 >gi|24379740|ref|NP_721695.1| peptide chain release factor 2 [Streptococcus mutans UA159] gi|24377701|gb|AAN59001.1|AE014966_11 putative peptide chain release factor (RF-2) [Streptococcus mutans UA159] Length = 325 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 144/325 (44%), Positives = 208/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + I A+ +E L +Q+ + +L E+ E+D + E Sbjct: 1 MTEPDFWDDNIAAQKTSQELNELKLKYETFNSMQELSDETELLQEMLEEDDS--LQGELE 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++L ++ + + LLS D+N+A LE+H G+GGTE+QDW +MLLRMYTR+ + Sbjct: 59 EDLVKLDKIMTSYEMTLLLSEPYDANNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK + L+ G+EAGIKS L +G NAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 119 FKVDVLDYQAGDEAGIKSVALSFEGQNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IE++I + D ++DT+R+ GAGGQ+VN + VR+THIP+G+VV +R+Q Sbjct: 179 EVMPELDDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVVASTVDRTQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 + N+ +A ML+AKLY++E +K+ + + + K EI WG QIRSYV PY MVKD RTN Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG+LD F+ A L + Sbjct: 299 YEVSQVDRVMDGELDGFIDAFLKWR 323 >gi|220932479|ref|YP_002509387.1| bacterial peptide chain release factor 2 (bRF-2) [Halothermothrix orenii H 168] gi|219993789|gb|ACL70392.1| bacterial peptide chain release factor 2 (bRF-2) [Halothermothrix orenii H 168] Length = 331 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 161/324 (49%), Positives = 222/324 (68%), Gaps = 1/324 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI-LQET 88 DP LW + +A+ + R+ + + + I +K++ + + +++ELA E++ E Sbjct: 1 MSDPGLWDDNKKAREITRKSKVVKDRIKSLKKLDELREEAEVMIELAEEDETNRELWSEV 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 D + ++ +++ + + L+GE D +A L +H GAGGTESQDWA+MLLRMY RWAE Sbjct: 61 EDYINSLEEKIDKMELKFRLNGEYDDCNAILSIHPGAGGTESQDWADMLLRMYVRWAESH 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 +K E L+ G+EAGIK TLLI G +YG+LKGE+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 121 GYKVETLDYLPGDEAGIKRVTLLISGEYSYGYLKGEKGVHRLVRISPFDSSGRRHTSFAS 180 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P +DD IE++I D +I+TYRASGAGGQHVN TDSAVRITHIPTG+VVQCQ ERS Sbjct: 181 VNVIPEIDDDIEVDIDTGDLKIETYRASGAGGQHVNKTDSAVRITHIPTGIVVQCQNERS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QHKNK A +L+A+L EL+ + R E EI WG QIRSYV PY ++KD RT Sbjct: 241 QHKNKKMAMMILKARLLELKKEARAEKIEELRGENKEIAWGNQIRSYVFHPYNLIKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352 +E+ + V+DG +D+F++A L Sbjct: 301 GLEEGNVQKVMDGYIDEFIEAYLK 324 >gi|329767964|ref|ZP_08259475.1| peptide chain release factor 2 [Gemella haemolysans M341] gi|328838449|gb|EGF88057.1| peptide chain release factor 2 [Gemella haemolysans M341] Length = 372 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 157/351 (44%), Positives = 223/351 (63%), Gaps = 1/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++++Q++ + QR++ + + W + A +L+ E + + + E Sbjct: 12 EVNKQISEFKTSLKIEEKEQRVAEIENMMLEADFWNDSETASLLVTESKSIKKELDEFSE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D L + ++E +EDD I Q+ + + +K VE F L S E D+N A LE+ Sbjct: 72 MIDYLEHSEEMVEFLKDEDDEEIYQDLLETVVNLKSSVEDFSFRLLFSEEYDNNTAILEI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGT++ DW+ ++LRMY R+ K+ K L G+ G+KSAT+ ++G AYG L Sbjct: 132 HAGAGGTDATDWSELMLRMYERFFTKQGLKYSYLNYQSGDITGVKSATIKVEGDFAYGLL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGG 240 KGE+GVHR+VRISP+D + +RHTSF+SI V P DD I IEI+ D +IDTYRA GAGG Sbjct: 192 KGEKGVHRVVRISPFDPSGKRHTSFASIDVIPEFNDDEINIEINNEDLKIDTYRAQGAGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QH+NTTDSAVRITH+PTG+VVQ Q ERSQ KNK A L++KLY+LE++++E Sbjct: 252 QHINTTDSAVRITHLPTGIVVQSQAERSQIKNKDAAMKNLKSKLYQLEIEEKERELAAIR 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + +IGWG QIRSYV PY MVKD RTN E ++ V+DG++ DF+ A L Sbjct: 312 GEQKDIGWGSQIRSYVFTPYTMVKDHRTNYEVSTVDKVMDGEIIDFIDAYL 362 >gi|312868547|ref|ZP_07728744.1| peptide chain release factor 2 [Lactobacillus oris PB013-T2-3] gi|311095918|gb|EFQ54165.1| peptide chain release factor 2 [Lactobacillus oris PB013-T2-3] Length = 332 Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats. Identities = 158/325 (48%), Positives = 211/325 (64%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + A+ L+ + L ++D+L D LEL E D + +E + Sbjct: 1 MAQPDFWNDNERAQKLINDNNDLKAKRDTYVALRDQLADLETNLELLELEPDPELEKEFA 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + + ++ + LLS + DS +A LE+H GAGGTE+QDW MLLRMY RWAE+ Sbjct: 61 TSFAQTEEALQQYRLNQLLSEKYDSKNAILEIHPGAGGTEAQDWGEMLLRMYVRWAEQHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 E GE AGIKS TLLIKG NA+G+L+ E+GVHRLVRISP+DS RRHTSF+S+ Sbjct: 121 LTVETANYEPGEVAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDSAGRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DDS+E++I+ +D R+DT+R+SGAGGQH+N T+SAVRITH+PTG+V Q ERSQ Sbjct: 181 DVMPELDDSVEVDINPADLRVDTFRSSGAGGQHINKTESAVRITHLPTGLVASSQAERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 N+ A NML++KLYELE +K+ + E + EIGWG QIRSYV PY +VKD R+ Sbjct: 241 LLNRQTAMNMLKSKLYELEEEKKAKERAEIEGEQLEIGWGSQIRSYVFHPYTLVKDNRSG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DGDLD F+ A L K Sbjct: 301 HETHNGQAVMDGDLDPFINAYLQWK 325 >gi|312149296|gb|ADQ29367.1| peptide chain release factor 2 [Borrelia burgdorferi N40] Length = 359 Score = 247 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 150/352 (42%), Positives = 218/352 (61%), Gaps = 4/352 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + LFD + ++ + + W + A+ +++ + L N I +E+ Sbjct: 9 LKQAEDIWRKLFDKNEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEEL 68 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 +++ D L ++ ++ + + S E D+N+A+L +H Sbjct: 69 INKIKDLSDL---CEIAENEKDTSGLEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIH 125 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTE+ DW ML RMY+R+AE++K+KTE +++ + E GIKS T+ IKG AYG LK Sbjct: 126 SGAGGTEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLK 184 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRL+RISP+D+ +RHTSF+S++V PV+DD IEI I D RIDTYRASGAGGQH Sbjct: 185 SEVGIHRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQH 244 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T SAVRITHI TG+V Q Q +RSQHKNK A +L+++LYE K +E + + Sbjct: 245 VNKTSSAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDT 304 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K EI WG QIRSYV QPY +VKD RT E ++ + V+DG++D+F++ L K Sbjct: 305 KKEISWGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 356 >gi|78187873|ref|YP_375916.1| peptide chain release factor 2 [Chlorobium luteolum DSM 273] gi|78167775|gb|ABB24873.1| bacterial peptide chain release factor 2 (bRF-2) [Chlorobium luteolum DSM 273] Length = 363 Score = 247 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 150/345 (43%), Positives = 224/345 (64%), Gaps = 1/345 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 N GG+FD D +++ L + +P W + A +++E + + +++ + Sbjct: 16 NSYGGIFDVDQRKEKIEDLEKVSGNPEFWNDQKAAHAVLKELNENRSWVEGYEKLAGKAE 75 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L +A E +D S +E + ++ I+ E+ +F+++LSG+ D +A + +HAGAGG Sbjct: 76 SCRDELAIADELEDESFERELTASIDAIEQEIAAIEFKNMLSGKDDPGNAIITIHAGAGG 135 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDWA ML RMY RWAE++ FK + +G+ AGIK+ATL I+GP AYG+LK E GV Sbjct: 136 TEAQDWAEMLYRMYMRWAERKGFKVYTDDYQEGDGAGIKTATLEIQGPYAYGYLKAENGV 195 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR+SP+DSN+RRHTSF+S++ YP +EIE+ + D + T+R+ G GGQ+VN + Sbjct: 196 HRLVRVSPFDSNARRHTSFASVYTYPEAPPDVEIEVRKEDLELSTFRSGGKGGQNVNKVE 255 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 +AVRI HIP+G+VV CQQERSQ +N+ +A ML A+LY+ + ++ + E K +I Sbjct: 256 TAVRIKHIPSGIVVGCQQERSQFQNRERAMKMLMAQLYQRQREEEDARKREVEGKKKKIE 315 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL + +KD RTN E+ VLDGD+DDFM+ L+ Sbjct: 316 WGSQIRSYVLDD-RRIKDHRTNYERFDVETVLDGDIDDFMEKYLS 359 >gi|293189308|ref|ZP_06608031.1| peptide chain release factor 2 [Actinomyces odontolyticus F0309] gi|292821771|gb|EFF80707.1| peptide chain release factor 2 [Actinomyces odontolyticus F0309] Length = 373 Score = 247 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 138/355 (38%), Positives = 212/355 (59%), Gaps = 3/355 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + D ++++ LN K P LW + A+ + H + + I ++ Sbjct: 12 LRTTMENIIAVVQPDKLREQIAELNEKAAAPDLWDDPSAAQAVTSALSHRQSELDRITQM 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSNDAYLE 120 +R+ D ++++A E+ D K ++ + +LL GE D +A + Sbjct: 72 SERIDDLEAMVDMAAEDPDEGADILAEAEADLEKLRKDLGDLEIRTLLDGEYDERNAVIT 131 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + +GAGG ++ D+A +LLRMY RWAE+ + T+ ++ EEAG+KSAT ++ P AYG Sbjct: 132 IRSGAGGVDAADFAEILLRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVQAPYAYGT 191 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L E G HRLVRISP+D+ RR TSF+++ V P+++ + IEI ES+ ++D +R+SG GG Sbjct: 192 LSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIETTDHIEIPESELKVDVFRSSGPGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L L ++ + Sbjct: 252 QSVNTTDSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVLRHEEEQAKKKELA 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVLQPYQMVKDLRT E +P V DGD+D F+ A + +K Sbjct: 312 GD-VKASWGDQMRSYVLQPYQMVKDLRTEYESGNPQSVFDGDIDGFINAGIRWRK 365 >gi|218248175|ref|YP_002373546.1| hypothetical protein PCC8801_3422 [Cyanothece sp. PCC 8801] gi|226739124|sp|B7K0A6|RF2_CYAP8 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|218168653|gb|ACK67390.1| hypothetical protein PCC8801_3422 [Cyanothece sp. PCC 8801] Length = 365 Score = 247 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 147/352 (41%), Positives = 217/352 (61%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +++ +L D + L P W N A+ +++ L +++ + Sbjct: 12 QIAARLGKTQDYLDLPALNANIQDLEQIAAQPDFWDNQETAQKTLQQLNDLKSSVEEYHQ 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +L D + EL E+D ++ +E NL ++ E++ + + LLSG DS A L + Sbjct: 72 WMGQLEDLKAIAELLELEEDATLNEEAEANLTQLNHELDRWELQRLLSGIYDSKGAVLTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGT++QDWA MLLRMYTRW E++ +K EI +G+EAGIKSATL I+G AYG+L Sbjct: 132 NAGAGGTDAQDWAEMLLRMYTRWGEQQGYKVHLTEISEGDEAGIKSATLEIEGRYAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI-EIEISESDCRIDTYRASGAGG 240 KGE+G HRLVRISP+++N +R TSF+ I V P +++ ++EI E D I T R+ G GG Sbjct: 192 KGEKGTHRLVRISPFNANGKRQTSFAGIEVMPALEEEDLKVEIPEKDLEITTTRSGGKGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q+VN ++AVR+ H+PTG+ V+C QERSQ +NK +A +L+AKL + ++R + Sbjct: 252 QNVNKVETAVRVVHLPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQAIAEIR 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E WG QIR+YV PYQMVKD+RTN E T + V+DG LD F+++ L Sbjct: 312 GDMVEAAWGNQIRNYVFHPYQMVKDVRTNTETTDVNGVMDGKLDLFIESYLR 363 >gi|300932665|ref|ZP_07147921.1| peptide chain release factor 2 [Corynebacterium resistens DSM 45100] Length = 378 Score = 247 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 149/360 (41%), Positives = 215/360 (59%), Gaps = 8/360 (2%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ L + + D + L + DP LW + A+ + E + + +K Sbjct: 11 EMDSTLTTIEKVLDLEALADSARELEDRAADPSLWDDPDHAQKVTSELSRVQGKLRKVKS 70 Query: 62 IQDRLCDNLILLELALEEDDCSI------LQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 ++ RL D ++ ++A E ++ + ++ E+E + ++LSGE D Sbjct: 71 LRQRLEDLPVMYDMAEEAAAEDPDTADEAMEMADEERAELRKEIESLEVTTMLSGEYDQR 130 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 +A + + +GAGG ++ DWA ML+RMYTRWAEK K + +I EEAGIKSAT ++ G Sbjct: 131 EAVVNIRSGAGGVDAADWAEMLMRMYTRWAEKSGHKVDIYDISYAEEAGIKSATFVVHGE 190 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNS-RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 YG L EQG HRLVR+SP+ S +R TSF+ + V PVV+ + I+I +++ R+D YR Sbjct: 191 YMYGTLSVEQGAHRLVRLSPFGSGGDKRQTSFAEVEVLPVVEQTDHIDIPDAEVRVDVYR 250 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 +SG GGQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + Q+ Sbjct: 251 SSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERA 310 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + + WG Q+RSYVL PYQMVKDLRTN E PS VLDGDLD F++A + + Sbjct: 311 ELDALGAG-GNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDLDGFLEAGIRWR 369 >gi|300778963|ref|ZP_07088821.1| peptide chain release factor RF2 [Chryseobacterium gleum ATCC 35910] gi|300504473|gb|EFK35613.1| peptide chain release factor RF2 [Chryseobacterium gleum ATCC 35910] Length = 376 Score = 247 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 145/353 (41%), Positives = 229/353 (64%), Gaps = 2/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ ++ L + ++ + KT P W N A+ +++ + + E Sbjct: 15 EVQSRIEDLHRYLQIEKKKIEIANDDEKTAAPEFWDNPKTAEAFLKQLRSKKKWVESYDE 74 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I + D +L + A +D +E + ++ ++E +F+++LS E D A L++ Sbjct: 75 IHTQFEDLQVLADFAK--EDPDSEKELDETFPQLVEKIEDLEFKNMLSNEGDELSAVLQI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGGTES DWA+ML+RMYT WAEK+ +K L +G+ AG+K+ TL I+G A+G+L Sbjct: 133 TAGAGGTESCDWASMLMRMYTMWAEKQGYKIRELNFQEGDVAGVKTVTLEIEGEYAFGYL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE GVHRLVRISP+DSN++RHTSF S++VYP+VDD+IEI I+ +D +T RASGAGGQ Sbjct: 193 KGENGVHRLVRISPFDSNAKRHTSFVSVYVYPLVDDTIEININPADISFETMRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN ++AVR+ H PTG++++ + RSQ +NK +A +LR++LYE+EL++R + N E+ Sbjct: 253 NVNKVETAVRLRHAPTGIIIENSESRSQLQNKEKAMQLLRSRLYEMELEERMKARNEIEA 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +K +I WG QIR+YV+ PY++VKD+R+ E + V++G++ F+KA L Sbjct: 313 NKMKIEWGSQIRNYVMHPYKLVKDVRSGHETSDVDAVMNGNITPFLKAFLMAD 365 >gi|329667680|gb|AEB93628.1| peptide chain release factor 2 (RF-2) [Lactobacillus johnsonii DPC 6026] Length = 332 Score = 247 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 150/324 (46%), Positives = 209/324 (64%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N +A+ L+ + + K+++ + D LEL + D + +E S Sbjct: 1 MAEPGFWDNQEQAQSLINDTNRMKEKSENFKQLEAKFDDAQTALELLKADPDPELSEELS 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + + + LLS + D ++A +E+H GAGGTE+ DWA+MLLRMY R+A Sbjct: 61 EEMVSLSQSFHDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAASHD 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 K E + GEEAG+KS ++ I+G NA+G LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 121 LKFEIEDYEPGEEAGVKSVSIRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D SIE++I+ D RID YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ Sbjct: 181 EVIPEIDQSIEVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A NMLRAKL++LE +K+ + + ++ EIG+G QIRSYV PY MVKD RTN Sbjct: 241 LQNRETAMNMLRAKLFQLEEEKKRKQTEELKGNQKEIGFGSQIRSYVFHPYNMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + + V+DG LD+F+ A L Sbjct: 301 FESSDVNGVMDGKLDNFIYAYLQW 324 >gi|168051671|ref|XP_001778277.1| predicted protein [Physcomitrella patens subsp. patens] gi|162670374|gb|EDQ56944.1| predicted protein [Physcomitrella patens subsp. patens] Length = 387 Score = 247 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 163/351 (46%), Positives = 236/351 (67%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++R ++ + +W + R+ L+ + P+LW+N +A RER L + + + Sbjct: 32 VARSIDLIKARLEWKKLLARVQELDVELAKPNLWENAAKAGQFSRERGALSGQVKSVISM 91 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 +D L +++ L ELA EE+D ++ + + L ++ ++ +LLSGE DS ++EV Sbjct: 92 EDELLEHVGLAELAHEENDTQVVTDVTQGLAELRKTASERELVALLSGEHDSRSCFIEVQ 151 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA M++RMY WA+ R ++ ++ GEEAGIK AT+ + G AYG+ K Sbjct: 152 AGAGGTESMDWAAMVMRMYRMWAQTRDYEVTVVDEMPGEEAGIKRATIRVDGLYAYGYAK 211 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVRISP+D+ RRHTSF+++ V P + + IEI ESD RI+ +RA GAGGQ Sbjct: 212 TEAGVHRLVRISPFDAGKRRHTSFAAVAVIPALDESEVSIEIGESDLRIERFRAGGAGGQ 271 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRI HIPTG+V QCQ +RSQH+NKA A +ML+++L+++E+ +R + Sbjct: 272 HVNKTESAVRIIHIPTGIVTQCQADRSQHRNKATALSMLQSRLHQMEVTRRAKANAQHTQ 331 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 S +++ WG QIRSYVLQPYQMVKDLRTN E + PS +LDG++D F+ A LA Sbjct: 332 SLSDVSWGNQIRSYVLQPYQMVKDLRTNYEVSDPSSILDGEIDGFIMAYLA 382 >gi|222823300|ref|YP_002574873.1| peptide chain release factor 2 [Campylobacter lari RM2100] gi|254790909|sp|B9KEY7|RF2_CAMLR RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|222538521|gb|ACM63622.1| peptide chain release factor 2 [Campylobacter lari RM2100] Length = 366 Score = 247 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 170/354 (48%), Positives = 232/354 (65%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL ++ + + + RL + P W +V +A ++ +E+ + N + + Sbjct: 12 KLKNKVGNIASIIKPEEIKARLKEIENLENSPSFWSDVKQAGIIGKEKTKISNLLKNYEN 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L D L +LA E+D +Q D+ ++ + + LLSGE D +A + + Sbjct: 72 AFNALNDASELFDLANSENDLDTIQALFDDAPNLEDLIVSLEISMLLSGENDGKNAIVSI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTES DWA+ML RMY R+ E+ FK E L+ +GEEAG+K + L+KG NAYG+L Sbjct: 132 HPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI + D RID YRASGAGGQ Sbjct: 192 KAENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEDKDIRIDYYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITH+P+G+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN E Sbjct: 252 HVNKTESAVRITHMPSGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDEANSSE- 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+N + ++LDGD+ ++ L +K Sbjct: 311 -KSEIGWGHQIRSYVLFPYQQVKDTRSNEAFSQVDNILDGDIKKMIEGVLIAQK 363 >gi|194333053|ref|YP_002014913.1| peptide chain release factor 2 [Prosthecochloris aestuarii DSM 271] gi|194310871|gb|ACF45266.1| peptide chain release factor 2 [Prosthecochloris aestuarii DSM 271] Length = 381 Score = 247 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 152/346 (43%), Positives = 222/346 (64%), Gaps = 1/346 (0%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 LN GG+FD D ++++ L T +P W + EA +++E ++I + Sbjct: 34 LNSYGGIFDIDERLKKIEELEQITAEPDFWNDQKEAHRIVKEINEHKTWTDDFQKIAADV 93 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 +E+A E +D S+ E + + I+ E+ + +++LSG+ D +A L ++AGAG Sbjct: 94 ASRQEEVEIAEELEDESLGSEIAGGIDSIEKEITALESKNMLSGKDDPGNALLTINAGAG 153 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+QDWA ML RMY RWAE++ +K + +GE AGIK+ATL I GP AYG+LK E G Sbjct: 154 GTEAQDWAQMLYRMYMRWAERKGYKVFMDDYQEGEGAGIKTATLEIVGPYAYGYLKAENG 213 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVR+SP+DSN+RRHTSF+S++ YP EI+I + D + T+R+ G GGQ+VN Sbjct: 214 VHRLVRVSPFDSNARRHTSFASVYTYPEAPPDAEIDIRKEDLELSTFRSGGKGGQNVNKV 273 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 ++AVRI HIP+G+VV CQQERSQ +N+ +A ML A+LY+ + ++ E E K +I Sbjct: 274 ETAVRIKHIPSGIVVSCQQERSQFQNRERAIKMLMAQLYKKQREEEEARKQAVEGQKMKI 333 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYV+ + +KD RTN E+ VLDGD+DDF++ L+ Sbjct: 334 EWGSQIRSYVMDD-RRIKDHRTNHERHDIEAVLDGDIDDFIEKYLS 378 >gi|315037900|ref|YP_004031468.1| peptide chain release factor 2 [Lactobacillus amylovorus GRL 1112] gi|325956373|ref|YP_004291785.1| peptide chain release factor 2 [Lactobacillus acidophilus 30SC] gi|312276033|gb|ADQ58673.1| peptide chain release factor 2 [Lactobacillus amylovorus GRL 1112] gi|325332938|gb|ADZ06846.1| peptide chain release factor 2 [Lactobacillus acidophilus 30SC] gi|327183192|gb|AEA31639.1| peptide chain release factor 2 [Lactobacillus amylovorus GRL 1118] Length = 332 Score = 247 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 153/324 (47%), Positives = 204/324 (62%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + +A+ L+ E L ++Q D +EL EE D + +ET Sbjct: 1 MAQPDFWNDQEKAQKLISENNVLKEKRDSFLKLQKGYEDESTAVELLREEPDPDLQKETE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++L ++ E + + LLSG+ DS++A +E+H GAGGTE+ DW MLLRMY R+ + Sbjct: 61 EDLATLQDEFHNYELDLLLSGKYDSHNALMEIHPGAGGTEAMDWGQMLLRMYQRYCDSAG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E + GEEAG+KS + I G NAYG LK E GVHRLVRISP+D+ RRHTSF+S+ Sbjct: 121 FKFEINDYEPGEEAGLKSVSARIVGKNAYGMLKSENGVHRLVRISPFDAAKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DDSI+I+I D RID YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ Sbjct: 181 EVIPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A N LRAKL+ LE +K+ + + + EIGWG QIRSYV PY +VKDLRT Sbjct: 241 LQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + V+DG L F+ + L Sbjct: 301 YETADANGVMDGKLQPFIYSYLQW 324 >gi|225872704|ref|YP_002754161.1| peptide chain release factor 2, programmed frameshift [Acidobacterium capsulatum ATCC 51196] gi|225792505|gb|ACO32595.1| peptide chain release factor 2, programmed frameshift [Acidobacterium capsulatum ATCC 51196] Length = 384 Score = 247 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 175/358 (48%), Positives = 229/358 (63%), Gaps = 5/358 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + Q+ L L+ + TK DP LW N ++ LMR+R+ ++ +++ E+ Sbjct: 12 VRDQVRDLREYLCPARLRSELAAIETKLADPALWSNPQLSQPLMRDRKRIEEQLAYDTEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIK-----LEVEYKQFESLLSGEADSNDA 117 R D ELA E + + + VE + ++LSGE D+ +A Sbjct: 72 ARRSGDIDAYFELARESEAAGEADANLEADLSREISALGEYVEKLESRTMLSGETDALNA 131 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 + VH GAGGTESQDWA ML+RMY RWAE++ FKTE + DGEEAGIKSAT I G A Sbjct: 132 IVTVHPGAGGTESQDWAEMLMRMYLRWAEQQGFKTEMNDYQDGEEAGIKSATFTIIGDYA 191 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 +G L GE GVHRLVRISP+D RRHTSF+S++V P +DDSI+I+I + R DTYR+ G Sbjct: 192 FGQLSGETGVHRLVRISPFDQAKRRHTSFASVFVSPEIDDSIQIDIKPDELRTDTYRSGG 251 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQHVNTTDSAVRITHIPTG+VVQCQ ERSQHKN+ +A MLR++LYE EL K++ Sbjct: 252 KGGQHVNTTDSAVRITHIPTGIVVQCQNERSQHKNREKAMKMLRSRLYEYELAKKQAETK 311 Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 E SK +I +G QIRSYVLQPY++ KD RT +E VLDG LD F++ L +++ Sbjct: 312 KLEDSKLDINFGSQIRSYVLQPYRIAKDHRTKVEVGDVDRVLDGYLDPFIRGYLTMRR 369 >gi|325925182|ref|ZP_08186595.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas perforans 91-118] gi|325544436|gb|EGD15806.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas perforans 91-118] Length = 329 Score = 247 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 172/318 (54%), Positives = 224/318 (70%), Gaps = 1/318 (0%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W + A+ L RER L+ + I ++ L D LLELA E D +L Sbjct: 2 WNDAERAQALGRERSMLEKTVIGIADVLSGLADAGDLLELAESEQDEDTALAVIADLDNY 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + VE +F+ + SG+ DS +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE + Sbjct: 62 QAHVEKLEFQRMFSGQMDSANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTELM 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E+ GE AGIKSAT+ I+G AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P V Sbjct: 122 EVSGGEVAGIKSATVRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEV 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT VV CQ RSQH+N+ Sbjct: 182 DDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRDN 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A ML AKLYELE+QKR + E++K++IGWG QIR+YVL +KDLRT IE++ Sbjct: 242 AMKMLAAKLYELEVQKRNAEKDALEATKSDIGWGSQIRNYVLD-QSRIKDLRTGIERSDT 300 Query: 336 SDVLDGDLDDFMKATLAI 353 VLDGDLD+F++A+L Sbjct: 301 QKVLDGDLDEFVEASLKA 318 >gi|224282580|ref|ZP_03645902.1| peptide chain release factor 2 [Bifidobacterium bifidum NCIMB 41171] gi|310287040|ref|YP_003938298.1| peptide chain release factor 2 with RF-1 domain [Bifidobacterium bifidum S17] gi|311063912|ref|YP_003970637.1| peptide chain release factor 2 (RF-2) PrfB [Bifidobacterium bifidum PRL2010] gi|313139738|ref|ZP_07801931.1| peptide chain release factor 2 [Bifidobacterium bifidum NCIMB 41171] gi|309250976|gb|ADO52724.1| peptide chain release factor 2 with RF-1 domain [Bifidobacterium bifidum S17] gi|310866231|gb|ADP35600.1| PrfB Bacterial Peptide Chain Release Factor 2 (RF-2) [Bifidobacterium bifidum PRL2010] gi|313132248|gb|EFR49865.1| peptide chain release factor 2 [Bifidobacterium bifidum NCIMB 41171] Length = 375 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 141/353 (39%), Positives = 206/353 (58%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + D + +++ L T+ P LW + A+ + + + E Sbjct: 12 EARSKYESIAKALDIERLKSQIATLETEAAKPGLWDDPENAQKVTSRLSAAQAQLKRLNE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 R+ D L+ELA EE D L E + I E++ + ++LL GE D A + + Sbjct: 72 ANRRIEDVETLVELAQEEADADSLSEAQSEIGSIAQELDDMEIQTLLDGEYDERSAVVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A MLLRMY R+ E+ FK + ++ EEAGIKSAT + P AYG L Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+V+ + I+I ++D R+DTY +SG GGQ Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTT SAVRITH+PTG+VV Q ERSQ +N+A A +L+++L L ++ + Sbjct: 252 GVNTTYSAVRITHLPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHEEEAKKKKELAG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD+D F++A + + Sbjct: 312 D-IKASWGDQMRSYVLHPYQMVKDLRTGCETSQTQAVFDGDIDAFIEAGIRWR 363 >gi|148263843|ref|YP_001230549.1| peptide chain release factor 2 [Geobacter uraniireducens Rf4] gi|146397343|gb|ABQ25976.1| bacterial peptide chain release factor 2 (bRF-2) [Geobacter uraniireducens Rf4] Length = 317 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 161/307 (52%), Positives = 222/307 (72%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 ++ER ++ +S ++ D +L+EL E +D + L E ++ V + +F+ Sbjct: 2 LKERTVMEKTLSAWDRFNRQVDDIRVLIELGSEAEDEATLAEVHGLNDELEKGVSHAEFQ 61 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LSG D++ ++ +++GAGGTESQDWA MLLRMY R+ E++ +KTE + G+EAG+ Sbjct: 62 KMLSGPHDASSCFVSINSGAGGTESQDWAEMLLRMYLRYCERKGWKTEITDYQAGDEAGV 121 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K T + G YG+LK E G+HRLVRISP+DSN+RRHTSF+S++V+P ++D IE++++E Sbjct: 122 KGVTFSVSGEYGYGYLKAEAGIHRLVRISPFDSNARRHTSFASVFVFPEIEDDIEVKVNE 181 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D R+DT+R+SGAGGQHVNTTDSA+RITHIP+G+VV CQ ERSQH NKA A +LRAKLY Sbjct: 182 ADLRVDTFRSSGAGGQHVNTTDSAIRITHIPSGIVVACQTERSQHMNKATAMRVLRAKLY 241 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E ELQ+RE A K EIGWG QIRSYVL PY+MVKDLRT +E +P VLDGDL++ Sbjct: 242 ERELQERESQAAEIGGEKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGDLEE 301 Query: 346 FMKATLA 352 F+ A L Sbjct: 302 FIVAFLM 308 >gi|297194069|ref|ZP_06911467.1| peptide chain release factor 2 [Streptomyces pristinaespiralis ATCC 25486] gi|297152097|gb|EDY64812.2| peptide chain release factor 2 [Streptomyces pristinaespiralis ATCC 25486] Length = 340 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 158/339 (46%), Positives = 215/339 (63%), Gaps = 5/339 (1%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 ++ L + P LW + A+ + + HL + + ++ R+ D IL ELA Sbjct: 1 MRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTEALRGRIDDLEILFELAEA 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 EDD E L+ ++ ++ + +LLSGE D +A + + A AGG ++ D+A L Sbjct: 61 EDDPDARAEAEAELESVRKALDEMEVRTLLSGEYDEREALVNIRAEAGGVDAADFAEQLQ 120 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RWAE+ + TE E EEAGIKS T ++K P AYG L EQG HRLVRISP+D+ Sbjct: 121 RMYLRWAERHNYGTEVYETSYAEEAGIKSTTFVVKAPYAYGTLSVEQGTHRLVRISPFDN 180 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 RR TSF+ + V PVV+ + IEI ES+ R+D YRASG GGQ VNTTDSAVR+THIPTG Sbjct: 181 QGRRQTSFAGVEVLPVVEKTDHIEIDESELRVDVYRASGPGGQGVNTTDSAVRLTHIPTG 240 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG--WGRQIRSYV 316 +VV CQ ERSQ +NKA A N+L+AKL E ++R+E ++ K + G WG Q+RSYV Sbjct: 241 IVVSCQNERSQIQNKASAMNVLQAKLLE---RRRQEEQARMDALKGDGGNSWGNQMRSYV 297 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 L PYQMVKDLRT+ E +P VLDG++D F++A + +K Sbjct: 298 LHPYQMVKDLRTDFEVGNPQSVLDGEIDGFLEAGIRWRK 336 >gi|46580270|ref|YP_011078.1| peptide chain release factor 2, programmed frameshift [Desulfovibrio vulgaris str. Hildenborough] gi|46449687|gb|AAS96337.1| peptide chain release factor 2, programmed frameshift [Desulfovibrio vulgaris str. Hildenborough] gi|311233748|gb|ADP86602.1| hypothetical protein Deval_1446 [Desulfovibrio vulgaris RCH1] Length = 371 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 170/349 (48%), Positives = 226/349 (64%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L Q + L G D RLS + + P W N + +++E+ L+ I+ ++ + Sbjct: 14 LFEQFSTLWGRLDLAGNRHRLSEIEKQLSTPDAWNNPEKLTPVLQEKSMLEGEINRLEAL 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L LA E++ L+ + + R++ +E + LLSG+ D A LE+H Sbjct: 74 ETCRNDVSEWLLLAEEDESAEALESLEEQIIRLEQLIEETEMNLLLSGKEDRFAALLEIH 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTE+QDWA MLLRMY RWA+ +KTE L+ DG+EAGIKS TL I GPNAYG LK Sbjct: 134 PGAGGTEAQDWAEMLLRMYLRWADTHGYKTEYLDYLDGDEAGIKSVTLRIAGPNAYGLLK 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE+G+HRL+RISP+D++ RRHTSF+S+ V P V I+IEI ++D RID +R+SG GGQ Sbjct: 194 GERGIHRLIRISPFDASGRRHTSFASVDVIPDVGQDIKIEIKDTDLRIDVFRSSGPGGQS 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT SAVR+THIPTG+V QCQ E+SQH NK A +LR +LYELEL+K EE + Sbjct: 254 VNTTSSAVRVTHIPTGIVAQCQNEKSQHHNKDSALQILRGRLYELELRKLEEEKKAQYGA 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K IG+G QIR+Y LQPY++VKD RTN E VLDG LD ++ L Sbjct: 314 KDAIGFGSQIRTYTLQPYRLVKDHRTNTEVGDVEAVLDGRLDKLLRDYL 362 >gi|319442594|ref|ZP_07991750.1| peptide chain release factor 2 [Corynebacterium variabile DSM 44702] Length = 356 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 151/348 (43%), Positives = 211/348 (60%), Gaps = 7/348 (2%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 + D D R+ L + DP LW + A+ + + H+ + + ++ ++ RL D ++ Sbjct: 1 MLDLDELDDRVRELEAQAADPSLWDDPDHAQQVTSQLSHVQSRLKKVRGLRSRLDDLPVM 60 Query: 73 LELALEEDDCSILQETSD------NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 E+A E + L ++ ++E + ++LSGE D +A + + + AG Sbjct: 61 YEMADEAAVEDAAEGAEAKELADAELADLRADIESLEVTTMLSGEYDDREAVVNIRSAAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G ++ DWA ML+RMYTRWAEK K E +I EEAGIKSAT ++ G YG L EQG Sbjct: 121 GVDAADWAEMLMRMYTRWAEKNGHKVEVYDISYAEEAGIKSATFVVHGDYMYGTLSVEQG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HRLVRISP+D+ RR TSF+ + V PVV+ S ++I E+D R+D YR+SG GGQ VNTT Sbjct: 181 THRLVRISPFDNQGRRQTSFAEVEVLPVVETSDHVDIDENDVRVDVYRSSGPGGQSVNTT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVR+THIPTG+VV CQ E+SQ +NKA A +L AKL E + Q+ + + Sbjct: 241 DSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLAAKLLERKRQEEAAEMDALRGDGSN- 299 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG Q+RSYVL PYQMVKDLRTN E PS VLDG +D ++A + + Sbjct: 300 SWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGGIDGLLEAGIRWR 347 >gi|257060501|ref|YP_003138389.1| hypothetical protein Cyan8802_2694 [Cyanothece sp. PCC 8802] gi|256590667|gb|ACV01554.1| hypothetical protein Cyan8802_2694 [Cyanothece sp. PCC 8802] Length = 375 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 147/352 (41%), Positives = 217/352 (61%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +++ +L D + L P W N A+ +++ L +++ + Sbjct: 22 QIAARLGKTQDYLDLPALNANIQDLEQIAAQPDFWDNQETAQKTLQQLNDLKSSVEEYHQ 81 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +L D + EL E+D ++ +E NL ++ E++ + + LLSG DS A L + Sbjct: 82 WMGQLEDLKAIAELLELEEDATLNEEAEANLTQLNHELDRWELQRLLSGIYDSKGAVLTI 141 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGT++QDWA MLLRMYTRW E++ +K EI +G+EAGIKSATL I+G AYG+L Sbjct: 142 NAGAGGTDAQDWAEMLLRMYTRWGEQQGYKVHLTEISEGDEAGIKSATLEIEGRYAYGYL 201 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI-EIEISESDCRIDTYRASGAGG 240 KGE+G HRLVRISP+++N +R TSF+ I V P +++ ++EI E D I T R+ G GG Sbjct: 202 KGEKGTHRLVRISPFNANGKRQTSFAGIEVMPALEEEDLKVEIPEKDLEITTTRSGGKGG 261 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q+VN ++AVR+ H+PTG+ V+C QERSQ +NK +A +L+AKL + ++R + Sbjct: 262 QNVNKVETAVRVVHLPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQAIAEIR 321 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E WG QIR+YV PYQMVKD+RTN E T + V+DG LD F+++ L Sbjct: 322 GDMVEAAWGNQIRNYVFHPYQMVKDVRTNTETTDVNGVMDGKLDLFIESYLR 373 >gi|326491925|dbj|BAJ98187.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 465 Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats. Identities = 153/352 (43%), Positives = 226/352 (64%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +++ + + W ++R L E P LW++ + A + RE+ L I + + Sbjct: 105 VAQSIRLIKKRLKWKWLLERSKQLAVVLEKPDLWEDPVFAGKVSREQGELMGKIKSVNQF 164 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + +L +++ +L LA +E D + E+ L ++ E + K+ +LLSG+ D ++EV Sbjct: 165 EQQLMEHIDMLRLARDEGDNELETESMRALADMRREAKEKELNALLSGDNDPYPCFIEVQ 224 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ES DWA M++ MY WA++R ++ +E GE AGIK AT+ + G A+G+ K Sbjct: 225 AGAGGVESMDWAAMVMNMYKSWAQRRGYRVTVIEEMPGELAGIKRATIKVDGEYAFGYAK 284 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVRISP+DS RRHTSF+++ V P+ + S +I+ESD RI+ +R+ G GGQ Sbjct: 285 SEIGVHRLVRISPFDSGKRRHTSFAAVAVIPILGESSSRYQINESDLRIERFRSGGPGGQ 344 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H NTT+SAVRI HIPTG CQ ERSQH N+A A +L+++L +LE+ ++ ++ Sbjct: 345 HANTTESAVRIVHIPTGTTATCQNERSQHMNRASAMAVLQSRLDQLEITRQAQMNAEHTQ 404 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 S +EI WG QIRSYVLQPY+MVKDLRTN E + P VL+GDLDDF+ + L++ Sbjct: 405 SLSEISWGNQIRSYVLQPYRMVKDLRTNYEVSDPDSVLEGDLDDFILSFLSL 456 >gi|67920292|ref|ZP_00513812.1| Peptide chain release factor 2 [Crocosphaera watsonii WH 8501] gi|67857776|gb|EAM53015.1| Peptide chain release factor 2 [Crocosphaera watsonii WH 8501] Length = 358 Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats. Identities = 145/345 (42%), Positives = 216/345 (62%), Gaps = 1/345 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD + L + P W A+ ++E L + + ++ +L D Sbjct: 9 RTIFDLPALKAVIKDLENTSAQPQFWDQPETAQTTLQELNDLKSQLEQYQQWCLQLDDTK 68 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + EL EDD ++ QE DN+ ++ ++ + + LLSG D+ A L ++AGAGGT++ Sbjct: 69 AIAELLELEDDATLRQEAEDNIIQLNHNLDRWELQQLLSGIYDTKGAVLTINAGAGGTDA 128 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA MLLRMYTRW E++ +K E+ +G+EAGIKSATL I+G A+G+LKGE+G HRL Sbjct: 129 QDWAQMLLRMYTRWGEQQGYKVHLTELSEGDEAGIKSATLEIEGRYAFGYLKGEKGTHRL 188 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSI-EIEISESDCRIDTYRASGAGGQHVNTTDSA 249 VRISP+++N +R TSF+ I + P +++ +++I + D I T R+ G GGQ+VN ++A Sbjct: 189 VRISPFNANGKRQTSFAGIEIMPALEEDDLKVDIPDKDLDISTSRSGGKGGQNVNKVETA 248 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+ H+PTG+ V+C QERSQ +NK +A +L+AKL + ++R + E WG Sbjct: 249 VRVVHVPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAEEQRAQEIAEIRGDIVEAAWG 308 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QIR+YV PYQMVKDLRTNIE T + V+DG LD+F++A L Sbjct: 309 TQIRNYVFHPYQMVKDLRTNIETTDVNGVMDGSLDEFIEAYLRFD 353 >gi|183981542|ref|YP_001849833.1| peptide chain release factor 2 PrfB [Mycobacterium marinum M] gi|238689234|sp|B2HGJ2|RF2_MYCMM RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|183174868|gb|ACC39978.1| peptide chain release factor 2 PrfB [Mycobacterium marinum M] Length = 371 Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats. Identities = 160/357 (44%), Positives = 219/357 (61%), Gaps = 8/357 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D + R+ L + DP LW + A+ + E H + ++E+ Sbjct: 12 LDSALTTVERVLDVEGLRSRIEKLEHEASDPKLWDDQTRAQRVTSELSHTQGELRRVEEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYL 119 + RL D +L ELA EE+ + + ++ K + +LLSGE D +A + Sbjct: 72 RRRLEDLPVLYELAAEEEGAAAGEALAEADAEFKALRADIEATEVRTLLSGEYDEREALV 131 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGG ++ DWA ML+RMY RWAE+ K+ E + EEAGIKSAT + P AYG Sbjct: 132 TIRSGAGGVDAADWAEMLMRMYVRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYG 191 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+SG G Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 251 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL E +KR E Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKLLE---RKRIEERAEL 308 Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 ++ K + G WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F++A + + Sbjct: 309 DALKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPATVLDGDIDGFLEAGIRWR 365 >gi|309390159|gb|ADO78039.1| bacterial peptide chain release factor 2 (bRF-2) [Halanaerobium praevalens DSM 2228] Length = 365 Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats. Identities = 162/353 (45%), Positives = 224/353 (63%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L L D + + + + + W + A+ ++ + I I+ Sbjct: 11 ELKASFQDLSDLLDREKLFETKNSIEAEMAAGGFWDDKENARQKSQQLDRIKKRIKVIQS 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++++ + I LELA EED + + + K + + + L+ D ++A L + Sbjct: 71 LEEKFEEAEIYLELAAEEDANLNKELQNTLAELEKEIEKLEL-KLRLNEPYDDHNAILSI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA MLLRMY+RWAE ++ E L+ + GEEAGIKS TL+I G AYG+L Sbjct: 130 HPGAGGTESQDWAQMLLRMYSRWAEANDYQLETLDFNPGEEAGIKSVTLMISGDYAYGYL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE+GVHRLVRISP+D++ RRHTSF+S+ V P +D +E+EI E++ +IDTYRASGAGGQ Sbjct: 190 KGERGVHRLVRISPFDASGRRHTSFASVDVMPEIDSDLEVEIDENNLKIDTYRASGAGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN TDSAVRITH PTGVVVQCQ +RSQHKNK A +L +KL EL+ + + E + Sbjct: 250 HVNKTDSAVRITHQPTGVVVQCQNQRSQHKNKETAMKILSSKLLELKREAQAEKIDELGG 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 EI WG QIRSYV PY M+KD RT+ E+ + V+DG LD+F+++ L K Sbjct: 310 EHKEIAWGSQIRSYVFHPYSMIKDHRTDFEEGNVDKVMDGYLDEFIESYLKYK 362 >gi|300853467|ref|YP_003778451.1| peptide chain release factor B [Clostridium ljungdahlii DSM 13528] gi|300433582|gb|ADK13349.1| peptide chain release factor B [Clostridium ljungdahlii DSM 13528] Length = 329 Score = 246 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 154/326 (47%), Positives = 220/326 (67%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 K ++P+ W ++ A+ + E + L+ + +++ R+ D IL +A EE+D S ++ Sbjct: 2 KMQEPNFWDHLERAQEVTSEEKFLNEKLDMYNKLESRINDAEILAHIAEEEEDVSDCKDI 61 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++ I+ ++ + E LLSGE D N+A L +H G GGT++QDW MLLRMYTRWAEK Sbjct: 62 LSEVEDIENIIDKLKIEILLSGEYDKNNAILNLHVGVGGTDAQDWTEMLLRMYTRWAEKS 121 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 +K E L+I ++AGIKS +L I G AYG+LK E+G+HRLVRISP+++N +R TSF+S Sbjct: 122 GYKVETLDILPADDAGIKSVSLRIIGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFAS 181 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P + +I+I D R+DTYR+SGAGGQHVN T+SAVRITHIPTG+VVQCQ ERS Sbjct: 182 VEVLPELTKDQDIDIRPEDLRVDTYRSSGAGGQHVNKTESAVRITHIPTGIVVQCQNERS 241 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QH N+ A ML++KL EL+ + +E ++GWG QIRSYV PY +VKD RT Sbjct: 242 QHYNRETAMLMLKSKLVELKERAHKEKIEDLAGELKDMGWGSQIRSYVFHPYTLVKDHRT 301 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354 +E + S V+DG++D+F+ A L + Sbjct: 302 GVENGNVSSVMDGEIDNFILAYLRQQ 327 >gi|168185950|ref|ZP_02620585.1| peptide chain release factor 2 [Clostridium botulinum C str. Eklund] gi|169295927|gb|EDS78060.1| peptide chain release factor 2 [Clostridium botulinum C str. Eklund] Length = 326 Score = 246 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 158/323 (48%), Positives = 228/323 (70%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++ W ++ +A+ + +E + L + I + R+ D +L+E+++EE+D S ++E Sbjct: 1 MQESDFWDDINKAQEITQEAKGLKDRIDGYNNTKTRIEDLEVLIEISIEEEDESSIEEIL 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + ++ I++ ++ + + LLSGE D N+A + +H+GAGGT++QDW MLLRMYTRWAEK+ Sbjct: 61 NEIKEIEIIIDDFKVQILLSGEYDKNNAIVSLHSGAGGTDAQDWTEMLLRMYTRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K + ++I G+EAGIKSA+L I G AYG+LK E+G+HRLVRISP+++N +R TSF+S+ Sbjct: 121 YKVDTIDILPGDEAGIKSASLKITGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASL 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + ++ +IEI D R+DTYRASGAGGQH+N TDSAVRITHIPTG+VVQ Q ERSQ Sbjct: 181 EVIPELRENQDIEIKADDLRVDTYRASGAGGQHINKTDSAVRITHIPTGIVVQSQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK A +ML++KL EL+ + +E EIGWG QIRSYV QPY MVKD RTN Sbjct: 241 FQNKDTAMSMLKSKLIELKERAHKEKIEDLSGDLKEIGWGSQIRSYVFQPYTMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E + V+DGD+D+F+ L Sbjct: 301 TEMGNVDAVMDGDIDNFILQYLK 323 >gi|312796706|ref|YP_004029628.1| peptide Chain Release Factor 2 (RF-2) [Burkholderia rhizoxinica HKI 454] gi|312168481|emb|CBW75484.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Burkholderia rhizoxinica HKI 454] Length = 320 Score = 246 bits (627), Expect = 4e-63, Method: Composition-based stats. Identities = 166/318 (52%), Positives = 231/318 (72%), Gaps = 1/318 (0%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W + +A+ L RE++ LD + + + L D L ELA EE D L ++Q + Sbjct: 2 WSDSKQAQALGREKKLLDAVVQMLSALNGDLTDTQELFELASEEQDDDTLLACERDVQAL 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + V +F + + AD N+ ++++ AGAGGTE+QDWA+MLLR Y R+ E++ FK E L Sbjct: 62 ERRVADIEFRRMFNNPADPNNCFVDIQAGAGGTEAQDWASMLLRQYLRYCERKGFKAEVL 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E DGE AGIK+AT+ ++G AYG+L+ E G+HRLVR SP+DS+ RHTSFSS++VYP V Sbjct: 122 EQSDGEVAGIKNATIKVEGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEV 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 D+SI+I+++ +D RIDT+RASGAGGQH+N TDSAVRITH+P+G+VVQCQ +RSQH+N+A+ Sbjct: 182 DESIDIDVNPADLRIDTFRASGAGGQHINKTDSAVRITHLPSGIVVQCQNDRSQHRNRAE 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A ML+++LYE E++KR+ + ESSKT++GWG QIRSYVL VKDLRTN+E ++ Sbjct: 242 AMAMLKSRLYEAEMRKRQAEQDKLESSKTDVGWGHQIRSYVLD-QSRVKDLRTNVEISNT 300 Query: 336 SDVLDGDLDDFMKATLAI 353 VLDGDLDDF+ A+L Sbjct: 301 RAVLDGDLDDFISASLKQ 318 >gi|315638344|ref|ZP_07893523.1| peptide chain release factor RF2 [Campylobacter upsaliensis JV21] gi|315481555|gb|EFU72180.1| peptide chain release factor RF2 [Campylobacter upsaliensis JV21] Length = 370 Score = 246 bits (627), Expect = 5e-63, Method: Composition-based stats. Identities = 172/353 (48%), Positives = 232/353 (65%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +++ + + D +LS + T+ DP+ W N A +L +E+ + N + + Sbjct: 13 LEQKVKNIASIIKPDELRVKLSEIETQENDPNFWNNAKNAAILGKEKTKITNLLKAYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L ++A E D L+ ++ +++ + + LLSGE D+ +A + +H Sbjct: 73 FNALNDANELFDMANSESDDETLKALFEDAPKLEDSITSLEISMLLSGENDNKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA+ML RMY R+ E+ FK E L+ +G+EAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGDEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDLRIDFYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT +VVQCQ +RSQHKNKA A+ MLR++LYELEL K+E AN Sbjct: 253 VNKTESAVRITHIPTNIVVQCQNDRSQHKNKATAFKMLRSRLYELELMKQEAAAN--SGE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+E+GWG QIRSYVL PYQ VKD R+N ++ +LDGD+ ++ L K Sbjct: 311 KSEMGWGHQIRSYVLFPYQQVKDTRSNEAFSNAEGILDGDIKKMIEGVLIAMK 363 >gi|219559147|ref|ZP_03538223.1| peptide chain release factor 2 [Mycobacterium tuberculosis T17] gi|260206441|ref|ZP_05773932.1| peptide chain release factor 2 [Mycobacterium tuberculosis K85] gi|308369955|ref|ZP_07419655.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu002] gi|308371233|ref|ZP_07424282.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu003] gi|308372424|ref|ZP_07428636.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu004] gi|308373628|ref|ZP_07433110.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu005] gi|308374772|ref|ZP_07437352.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu006] gi|308375989|ref|ZP_07668163.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu007] gi|308377222|ref|ZP_07668462.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu008] gi|308378190|ref|ZP_07481848.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu009] gi|308379411|ref|ZP_07486192.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu010] gi|308380571|ref|ZP_07490411.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu011] gi|308406052|ref|ZP_07494953.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu012] gi|54039054|sp|P66027|RF2_MYCBO RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|54041597|sp|P66026|RF2_MYCTU RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|308325955|gb|EFP14806.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu002] gi|308329480|gb|EFP18331.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu003] gi|308333326|gb|EFP22177.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu004] gi|308336980|gb|EFP25831.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu005] gi|308340794|gb|EFP29645.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu006] gi|308344662|gb|EFP33513.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu007] gi|308348612|gb|EFP37463.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu008] gi|308353337|gb|EFP42188.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu009] gi|308357171|gb|EFP46022.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu010] gi|308361122|gb|EFP49973.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu011] gi|308364657|gb|EFP53508.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis SUMu012] gi|323718336|gb|EGB27514.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis CDC1551A] Length = 371 Score = 246 bits (627), Expect = 5e-63, Method: Composition-based stats. Identities = 161/357 (45%), Positives = 219/357 (61%), Gaps = 8/357 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D + R+ L + DPHLW + A+ + E H + ++E+ Sbjct: 12 LDCTLTTVERVLDVEGLRSRIEKLEHEASDPHLWDDQTRAQRVTSELSHTQGELRRVEEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYL 119 + RL D +L ELA EE + ++ +K + +LLSGE D +A + Sbjct: 72 RRRLDDLPVLYELAAEEAGAAAADAVAEADAELKSLRADIEATEVRTLLSGEYDEREALV 131 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGG ++ DWA ML+RMY RWAE+ K+ E + EEAGIKSAT + P AYG Sbjct: 132 TIRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYG 191 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+SG G Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 251 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+THIP+G+VV CQ E+SQ +NK A +L+AKL E +KR E Sbjct: 252 GQSVNTTDSAVRLTHIPSGIVVTCQNEKSQLQNKIAAMRVLQAKLLE---RKRLEERAEL 308 Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 ++ K + G WG Q+RSYVL PYQMVKDLRT E +P+ VLDGDLD F++A + + Sbjct: 309 DALKADGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDLDGFLEAGIRWR 365 >gi|160893549|ref|ZP_02074333.1| hypothetical protein CLOL250_01103 [Clostridium sp. L2-50] gi|156864534|gb|EDO57965.1| hypothetical protein CLOL250_01103 [Clostridium sp. L2-50] Length = 329 Score = 246 bits (627), Expect = 5e-63, Method: Composition-based stats. Identities = 163/324 (50%), Positives = 222/324 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P W +V ++ + R+ + L +++ ++++ D L+++A EE D S+++E Sbjct: 1 MEQPGFWDDVAKSTSVSRQLKKLQDSLEEYQKLEQDFSDIETLIQMAEEEGDSSMIEEIG 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L + E E + LLSGE D DA + +HAGAGGTES DW +ML RMYTRWAEK Sbjct: 61 EMLTAFQKEFENYRISLLLSGEFDGYDAVMTLHAGAGGTESCDWTSMLYRMYTRWAEKHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ +G+EAGIKS T+ I G NAYG+LK E+GVHRLVRISP+++ +R TSF+S Sbjct: 121 FKVEVLDYLEGDEAGIKSVTIQISGQNAYGYLKSEKGVHRLVRISPFNAAGKRQTSFASC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ +E++I+E D RIDTYR+SGAGGQH+N T SAVRITHIPTG+VVQCQ ERSQ Sbjct: 181 DVIPEIEEDLEVDINEDDLRIDTYRSSGAGGQHINKTSSAVRITHIPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK +A ML++KLY ++ Q+ + + E G+G QIRSYV+QPY MVKD RT Sbjct: 241 HMNKDKAMQMLKSKLYLIKKQENLDKISDIRGEILENGFGSQIRSYVMQPYTMVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + + VLDG+LD FM A L Sbjct: 301 EESGNVAAVLDGELDGFMNAYLKW 324 >gi|78044074|ref|YP_361356.1| peptide chain release factor 1 [Carboxydothermus hydrogenoformans Z-2901] gi|119361519|sp|Q3A928|RF1_CARHZ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|77996189|gb|ABB15088.1| peptide chain release factor 1 [Carboxydothermus hydrogenoformans Z-2901] Length = 358 Score = 246 bits (627), Expect = 5e-63, Method: Composition-based stats. Identities = 113/351 (32%), Positives = 184/351 (52%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D ++ L+ DP + + + ++ ++ + +E + + + Sbjct: 1 MFDKLDQLEEKYEELSRLISDPEVIADTQRWQGYVKAHAEIEEIVQVYREYKKTVKEIED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 + E+ D + L +K E + L D + +E+ AGAGG Sbjct: 61 AERMLDEKLDPDFRELVQSELHDLKERREELEAKLKILLLPKDPNDEKNVIMEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+++A++ +K E ++ H + G K I+G Y +K E GV Sbjct: 121 EEAALFAGDLFRMYSKYADRMGWKVEIMDSHPTDLGGFKEVIFTIEGKGVYSRMKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +E+EI+ +D RID + ASGAGGQHVN T+ Sbjct: 181 HRVQRVPTTESGGRIHTSTATVAVLP-EAEEVEVEINPNDLRIDVFCASGAGGQHVNKTE 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTG+VV CQ E+SQHKNK +A +LRA+L + Q++E + + K+++G Sbjct: 240 SAVRITHIPTGIVVTCQDEKSQHKNKERAMKILRARLLDKARQEQEAE--LASARKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + VL+GDLD+ + A + + Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTLHRLDAVLEGDLDEIIDALITTDQ 347 >gi|32033818|ref|ZP_00134103.1| COG0216: Protein chain release factor A [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307249197|ref|ZP_07531194.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307260449|ref|ZP_07542144.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306858721|gb|EFM90780.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306869852|gb|EFN01634.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 360 Score = 246 bits (627), Expect = 5e-63, Method: Composition-based stats. Identities = 113/344 (32%), Positives = 183/344 (53%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R L DP + + + + +E L+ ++ + D L Sbjct: 9 LESLSERHEELQALLGDPSVINDQDKFRAYSKEYSQLEEVVTTFNRWKKLNNDIEEAQIL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + E + +E Q L D +A+LE+ AG GG E+ +A Sbjct: 69 LDDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+ E ++++ E + ++ E+ G K + I G YG LK E G HR+ R+ Sbjct: 129 GDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPTDLRIDTYRSSGAGGQHVNTTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A +L +++ ++E +++ ++ + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQ--ADTRRNLLGSGDRSDK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +V++G +D+ ++ + + Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 349 >gi|33239657|ref|NP_874599.1| peptide chain release factor 2 [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237182|gb|AAP99251.1| Protein chain release factor B [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 356 Score = 246 bits (627), Expect = 5e-63, Method: Composition-based stats. Identities = 145/342 (42%), Positives = 207/342 (60%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 L +FD L P W + +A+ MR+ + + ++ + + D Sbjct: 2 LRTVFDVPVLNALQVDLEQIAAQPDFWNDQQKARKQMRQLDEVKDQLTKLANWNAAIEDA 61 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 + LEL E D +++E L ++K E++ + E LLSG D A L ++AGAGGT+ Sbjct: 62 KVSLELYELEPDNEMIEEAQIGLCQLKTELDLWELERLLSGPYDKEGAVLAINAGAGGTD 121 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA MLLRMY RWAE K E+ +GEEAGIKSAT+ I+G AYG+L+ E+G HR Sbjct: 122 AQDWAQMLLRMYMRWAESHGMKVILSELSEGEEAGIKSATIEIEGRYAYGYLQNEKGTHR 181 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+++N +R TSF+ I V P +++ + +EI E D + T R+ GAGGQ+VN ++A Sbjct: 182 LVRISPFNANGKRQTSFAGIEVMPQLEEDVHLEIPEKDLEVTTSRSGGAGGQNVNKVETA 241 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRI HIPTG+ V+C QERSQ +NK +A +L+AKL + ++R E WG Sbjct: 242 VRILHIPTGLAVRCTQERSQLQNKEKAMALLKAKLMIIAQEQRAAEIADIRGDIVEAAWG 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIR+YV PYQMVKDLR+ E V++GDLD F+++ L Sbjct: 302 NQIRNYVFHPYQMVKDLRSGTESNDVESVMNGDLDLFIQSLL 343 >gi|194337758|ref|YP_002019552.1| peptide chain release factor 2 [Pelodictyon phaeoclathratiforme BU-1] gi|194310235|gb|ACF44935.1| peptide chain release factor 2 [Pelodictyon phaeoclathratiforme BU-1] Length = 363 Score = 246 bits (627), Expect = 5e-63, Method: Composition-based stats. Identities = 149/345 (43%), Positives = 223/345 (64%), Gaps = 1/345 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 N GG+FD D +++ L + DP W + A +++E + ++I + Sbjct: 16 NSYGGIFDVDERKEKIEDLEKISFDPAFWNDQKAANKVLKELNEHKSWTDAYEKIILKAR 75 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 ++A+E DD S +E + + I+ ++ +F+++LSG+ D+ +A + +HAGAGG Sbjct: 76 SCQDEFDIAIELDDESFGEELTALIASIEHDISAIEFKNMLSGKDDAGNAMITIHAGAGG 135 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDWA ML RMY RWAE++ FK + +G+ AGIK+ATL I+GP AYG+LK E GV Sbjct: 136 TEAQDWAEMLYRMYMRWAERKGFKIYTDDYQEGDGAGIKTATLEIEGPYAYGYLKAENGV 195 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR+SP+DSN+RRHTSF+S++ YP +EI++ + D + T+R+ G GGQ+VN + Sbjct: 196 HRLVRVSPFDSNARRHTSFASVFTYPEAPPDVEIDVRKEDLELSTFRSGGKGGQNVNKVE 255 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 +AVRI H+PTG+VV CQ+ERSQ +N+ +A ML A+LY+ + + + E K +I Sbjct: 256 TAVRIKHLPTGIVVGCQEERSQFQNRERAMKMLMAQLYQRQRDEEDARKREIEGKKKKIE 315 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL + +KD RTN E+ VLDGDLD+FM+ L+ Sbjct: 316 WGSQIRSYVLDD-RRIKDHRTNYERFDVETVLDGDLDEFMEKYLS 359 >gi|329769029|ref|ZP_08260451.1| peptide chain release factor 2 [Gemella sanguinis M325] gi|328839520|gb|EGF89096.1| peptide chain release factor 2 [Gemella sanguinis M325] Length = 372 Score = 246 bits (627), Expect = 5e-63, Method: Composition-based stats. Identities = 155/351 (44%), Positives = 221/351 (62%), Gaps = 1/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ +++ ++ QR++ + D W + A L+ E + + + Sbjct: 12 EIEKRITEFKTSLKIEDKEQRVAEIENMMLDADFWNDSDNASALVTESKSIKKELDEFSN 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D L + ++E +E+D I + + + +K VE F L S E D+N+A L++ Sbjct: 72 MLDYLEHSQEMVEFLRDEEDKEIYNDLEETVATLKDSVEDFSFRLLFSEEYDNNNAILDI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGT++ DWA ++LRMY R+ K+ K L G+ G+KSAT+ ++G AYG L Sbjct: 132 HAGAGGTDATDWAEIMLRMYERFFSKQGLKYSYLNYQSGDITGVKSATIKVEGDFAYGLL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGG 240 KGE+GVHR++RISP+D + +RHTSF+SI V P DD I IEI+ D +IDTYRA GAGG Sbjct: 192 KGEKGVHRVIRISPFDPSGKRHTSFASIDVMPEFSDDEINIEINNDDLKIDTYRAQGAGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QH+NTTDSAVRITH+PTG+VVQ Q ERSQ KNK A L++KLY+LEL+++E+ Sbjct: 252 QHINTTDSAVRITHLPTGIVVQSQAERSQIKNKDTAMKNLKSKLYQLELEEKEKELASIR 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + +IGWG QIRSYV PY MVKD RTN E ++ V+DGD+ DF+ A L Sbjct: 312 GEQKDIGWGSQIRSYVFTPYTMVKDHRTNYEVSTVDKVMDGDIIDFIDAYL 362 >gi|110597266|ref|ZP_01385554.1| peptide chain release factor 2 [Chlorobium ferrooxidans DSM 13031] gi|110341102|gb|EAT59570.1| peptide chain release factor 2 [Chlorobium ferrooxidans DSM 13031] Length = 363 Score = 246 bits (627), Expect = 5e-63, Method: Composition-based stats. Identities = 155/345 (44%), Positives = 223/345 (64%), Gaps = 1/345 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 N GG+FD D +++ L T DP W + EA +++E +++ + Sbjct: 16 NSYGGIFDVDQRKEKVEDLEKITADPAFWNDQKEAHKILKELNEHKTWTEGYEKLAAKEK 75 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L LE+A E +D S E S + I+ E+ +F+++LSG+ D+ +A + +HAGAGG Sbjct: 76 VCLDELEIASELEDESFSDELSTAIAEIEQEIAAIEFKNMLSGKDDAGNALITIHAGAGG 135 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDWA ML RMY RWAE++ FK + +G+ AGIK+ATL I+G AYG+LK E GV Sbjct: 136 TEAQDWAEMLYRMYMRWAERKGFKIYTDDYQEGDGAGIKTATLEIQGAYAYGYLKAENGV 195 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR+SPYDSN+RRHTSF+S++ YP +EIE+ + D + T+R+ G GGQ+VN + Sbjct: 196 HRLVRVSPYDSNARRHTSFASVYTYPEAPPDVEIEVRKEDLELSTFRSGGKGGQNVNKVE 255 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 +AVRI H+PTG+VV CQ+ERSQ +N+ +A ML A+LY+ + ++ + E K +I Sbjct: 256 TAVRIKHLPTGIVVGCQEERSQFQNRERAMKMLMAQLYQRQREEEDAKKREIEGKKKKIE 315 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIRSYVL + +KD RTN E+ VLDGDLD+FM+ L+ Sbjct: 316 WGSQIRSYVLDD-RRIKDHRTNYERFDVETVLDGDLDEFMEHYLS 359 >gi|312898633|ref|ZP_07758023.1| peptide chain release factor 2 [Megasphaera micronuciformis F0359] gi|310620552|gb|EFQ04122.1| peptide chain release factor 2 [Megasphaera micronuciformis F0359] Length = 338 Score = 246 bits (627), Expect = 5e-63, Method: Composition-based stats. Identities = 151/323 (46%), Positives = 211/323 (65%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 + DP W + AK + +E L + ++ + D L +LA E++D S E Sbjct: 2 RMSDPDFWNSPDTAKAVSQEATKLKEEVQGHDDLVNEAADLSELYDLAAEDEDTSFTGEI 61 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 R+ E+E ++ LLSGE DS +A + HAGAGGTE+QDW M++RMY+RWAE+ Sbjct: 62 ERQYYRLVKELEKREVLLLLSGEYDSCNAIMAFHAGAGGTEAQDWTQMIVRMYSRWAEQH 121 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 + ++ G+EAG KS ++G NAYG+LK E+GVHRLVRISP+D+N RRHTSF++ Sbjct: 122 GYTIRMIDYQPGDEAGTKSCAFTVEGENAYGYLKSEKGVHRLVRISPFDTNGRRHTSFTA 181 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P + D E+EI+ D R+D +RASGAGGQHVN T SAVR+THIPTG+VVQCQ ERS Sbjct: 182 VDVMPELPDDAEVEINMDDVRVDYFRASGAGGQHVNKTSSAVRMTHIPTGIVVQCQNERS 241 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q +N+ LRAKL+ELE +K+E++ ++ I WG QIRSYV PY +VKD RT Sbjct: 242 QIQNREMCMKYLRAKLFELEEEKKEKLRAELTGTQQSIEWGSQIRSYVFHPYNLVKDHRT 301 Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351 +E ++ V+DG++D F++ L Sbjct: 302 GVETSNIQSVMDGNIDMFIEGYL 324 >gi|307244800|ref|ZP_07526899.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307253754|ref|ZP_07535608.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258211|ref|ZP_07539954.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306854245|gb|EFM86451.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306863238|gb|EFM95178.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867671|gb|EFM99516.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 360 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 113/344 (32%), Positives = 183/344 (53%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R L DP + + + + +E L+ ++ + D L Sbjct: 9 LESLSERHEELQALLGDPSVINDQDKFRAYSKEYSQLEEVVTTFNRWKKLNNDIEEAQIL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + E + +E Q L D +A+LE+ AG GG E+ +A Sbjct: 69 LDDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+ E ++++ E + ++ E+ G K + I G YG LK E G HR+ R+ Sbjct: 129 GDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A +L +++ ++E +++ ++ + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQ--ADTRRNLLGSGDRSDK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +V++G +D+ ++ + + Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 349 >gi|297172687|gb|ADI23654.1| protein chain release factor B [uncultured Gemmatimonadales bacterium HF4000_15H13] Length = 328 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 167/323 (51%), Positives = 224/323 (69%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W AK ++ E + + + + + R+ + L+EL EEDD + +E + Sbjct: 1 MAQPGFWDKQEAAKAVIEESNSIKSWLEPWQALDGRVSELRALVELLEEEDDEELAEEFA 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + VE + ++L G+ D A + +H GAGGTESQDWA ML+RMYTRWAE+ Sbjct: 61 SGVDELTKGVEALELRTMLQGDDDHRGAIITIHPGAGGTESQDWAQMLVRMYTRWAERGG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F L++ EEAGIKSATL I G +AYG+LK E GVHRLVRISP+D+ +RRHTSF+S+ Sbjct: 121 FTVNVLDLQPAEEAGIKSATLEINGESAYGFLKAEGGVHRLVRISPFDAQARRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 ++YP VDDSIEIEI++ D R+DTYRASGAGGQHVN TDSAVR+TH PTG+VVQCQQERSQ Sbjct: 181 FIYPQVDDSIEIEINDDDLRVDTYRASGAGGQHVNKTDSAVRLTHAPTGIVVQCQQERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 HKN+A A ML A+LY+ L+++++ + E+SK +IG+G QIRSYV QPY MV D RT Sbjct: 241 HKNRATAMKMLLARLYQHALEEKKKERAVLEASKRDIGFGNQIRSYVFQPYTMVNDHRTE 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 ++ T V+DG +D F++A L Sbjct: 301 LKITDVQSVMDGAIDPFIEAYLK 323 >gi|34556562|ref|NP_906377.1| peptide chain release factor 2 [Wolinella succinogenes DSM 1740] gi|81833248|sp|Q7MAP4|RF2_WOLSU RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|34482276|emb|CAE09277.1| PEPTIDE CHAIN RELEASE FACTOR 2 [Wolinella succinogenes] Length = 368 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 175/353 (49%), Positives = 242/353 (68%), Gaps = 2/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LS + + + + D+ RL + W + +A + +E++ L+ + +E Sbjct: 12 ELSTKRDNIAKIIKPDSIENRLGEIEALEHSEGFWNDATKAGEVQKEKRKLERILKKYEE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D L E+A +++D L + ++ E++ + E +LSGE D ++A + + Sbjct: 72 ANQAINDAKELFEIATQDNDEETLGLLFEESGHLEKEIKSVEIEVMLSGEHDGSNAIITI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA++L RMY RWAE+R FK E L+ +GEEAGIK A+ +IKG NAYG+L Sbjct: 132 HPGAGGTESQDWASILYRMYLRWAERRGFKVEVLDYQEGEEAGIKDASFIIKGENAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HRLVRISP+D+N++RHTSF+S+ V P VDD I+IEI E D R+DTYRASGAGGQ Sbjct: 192 KVENGIHRLVRISPFDANAKRHTSFTSVMVSPEVDDDIDIEIEEKDLRLDTYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SA+RITHIPTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL KR + E Sbjct: 252 HVNKTESAIRITHIPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELAKRSAEYDSME- 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+NI ++ +LDGDLD+ ++ L + Sbjct: 311 -KSEIGWGHQIRSYVLAPYQQVKDTRSNIAYSNIEAILDGDLDELLEGVLISQ 362 >gi|159902739|ref|YP_001550083.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT 9211] gi|159887915|gb|ABX08129.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT 9211] Length = 356 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 146/342 (42%), Positives = 205/342 (59%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 L +FD L P W + +AK MR + + + + + D Sbjct: 2 LRTVFDVPALNALRKDLEQIASQPEFWNDQQKAKKEMRRLDEVKAQLKKLVDWDAAIEDA 61 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 + LEL E D +L E L +K +++ + E LLSG+ D L ++AGAGGT+ Sbjct: 62 QVSLELYELEPDDEMLAEAIKGLDNLKSDLDLWELERLLSGQYDKEGVVLSINAGAGGTD 121 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWA MLLRMYTRWA+ K E+ +GEEAGIKSATL I G AYG+L+ E+G HR Sbjct: 122 AQDWAQMLLRMYTRWADDHGMKVTVDELSEGEEAGIKSATLEIDGRYAYGYLQNEKGTHR 181 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+++N +R TSF+ + + P +++ +E++I E D I T R+ GAGGQ+VN ++A Sbjct: 182 LVRISPFNANGKRQTSFAGVEIMPKLEEEVELDIPEKDLEITTSRSGGAGGQNVNKVETA 241 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRI H+P+G+ V+C QERSQ +NK +A +L+AKL + ++R E WG Sbjct: 242 VRIVHLPSGLAVRCTQERSQLQNKEKAMALLKAKLMIIAQEQRASQIADIRGDIVEAAWG 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 QIR+YV PYQMVKDLRT E T V++GDLD F++A L Sbjct: 302 NQIRNYVFHPYQMVKDLRTGKESTDVEGVMNGDLDPFIQALL 343 >gi|57168993|ref|ZP_00368122.1| peptide chain release factor 2 [Campylobacter coli RM2228] gi|305432246|ref|ZP_07401409.1| peptide chain release factor RF2 [Campylobacter coli JV20] gi|57019659|gb|EAL56348.1| peptide chain release factor 2 [Campylobacter coli RM2228] gi|304444594|gb|EFM37244.1| peptide chain release factor RF2 [Campylobacter coli JV20] Length = 365 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 169/353 (47%), Positives = 229/353 (64%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + +N RL + P W +V +A ++ +E+ + N + + Sbjct: 13 LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWNDVKQAGIIGKEKTKITNLLKNYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L +LA E+D L+ ++ +++ + + LLSGE D +A + +H Sbjct: 73 FNALNDASELFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA+ML RMY R+ E+ FK E L+ +GEEAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSAN--AGE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+ + ++LDGD+ ++ L K Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363 >gi|218132301|ref|ZP_03461105.1| hypothetical protein BACPEC_00159 [Bacteroides pectinophilus ATCC 43243] gi|217992816|gb|EEC58817.1| hypothetical protein BACPEC_00159 [Bacteroides pectinophilus ATCC 43243] Length = 333 Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats. Identities = 152/325 (46%), Positives = 223/325 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P W + +++ M+E + L ++ E++ + D L+ +A EE+D S++ E Sbjct: 1 MEAPGFWDDADKSQEAMKELKSLKDSFEKYNELKQGMDDIETLIAMADEENDESLVPEVE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + + + + +LLSGE D ++A L +HAGAGGTE+ DW ML+RMYTRWAE + Sbjct: 61 EEFNVFEKKFDALRIGTLLSGEYDRDNAILTLHAGAGGTEACDWCQMLMRMYTRWAESKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +KTE ++ +G+EAG+K+ T+ I+G NAYG+L+ E G+HRLVRISP+++ +R TSF S Sbjct: 121 YKTEVVDYLEGDEAGVKAVTIEIEGENAYGYLRSEHGIHRLVRISPFNAAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ +++EI++ D RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQ Sbjct: 181 DVMPDIEEDVDVEINDDDLRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H+NK +A ML+AKLY L+ Q+ E + ++ +G QIRSYVLQPY MVKD RTN Sbjct: 241 HQNKDKAMQMLKAKLYLLKKQENAEKTSDIRGDVKDVNFGSQIRSYVLQPYTMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + VLDG++D F+ A L + Sbjct: 301 EEVGNAQSVLDGNIDPFITAYLKWQ 325 >gi|88856358|ref|ZP_01131017.1| peptide chain release factor 2 [marine actinobacterium PHSC20C1] gi|88814442|gb|EAR24305.1| peptide chain release factor 2 [marine actinobacterium PHSC20C1] Length = 368 Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats. Identities = 146/353 (41%), Positives = 214/353 (60%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + D D ++ L+ P LW + +A+ + + H ++ I I Sbjct: 13 LRSTFADIRQVVDTDRLTSEIARLSEAAGAPDLWDDTDKAQKVTSDLSHRQAELAKINSI 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 +RL D I+++LA EE D + L IK + + ++LL+GE D A + + Sbjct: 73 SNRLDDLEIMVQLANEESDAQAGADARAELTGIKKTLGDLEVQTLLNGEFDQRPAVITIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ D+A MLLRMY R+AE+ + T L+ EEAGIKSAT + P A+G L Sbjct: 133 AGAGGVDAADFAEMLLRMYLRYAEQHSYPTRVLDTSYAEEAGIKSATFEVDAPFAFGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVR+SP++S +R TSF+++ V P+++ + +E+ E+D R+D +R+SG GGQ Sbjct: 193 VEAGTHRLVRMSPFNSAGKRQTSFAAVEVVPLIETTDVVEVPENDIRVDVFRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV CQ E+SQ +N+A A +L+++L L+ ++ Sbjct: 253 VNTTDSAVRITHLPTGIVVSCQNEKSQIQNRAAAMRVLQSRLLLLQREQEAATKKEIAGV 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 T WG Q+RSYVL PYQMVKDLRT E +PS+V DGDLD F+ A + +K Sbjct: 313 IT-ASWGDQMRSYVLAPYQMVKDLRTEFEVNNPSNVFDGDLDGFISAGIKWRK 364 >gi|253680935|ref|ZP_04861738.1| peptide chain release factor 2 [Clostridium botulinum D str. 1873] gi|253562784|gb|EES92230.1| peptide chain release factor 2 [Clostridium botulinum D str. 1873] Length = 327 Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats. Identities = 167/326 (51%), Positives = 231/326 (70%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++ + W N+ +A+ + +E + L + I ++RL D +L+E+++EEDD S ++E Sbjct: 1 MQESNFWDNINKAQEITQEAKGLKDKIEKYYNTKNRLEDLKVLIEISIEEDDESSVEEIL 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + ++ +K+ ++ + + LLSGE D N+A + +HAGAGGT++QDW MLLRMYTRWAE + Sbjct: 61 NEIKEVKVIIDEFKVQILLSGEYDKNNAIVSLHAGAGGTDAQDWTEMLLRMYTRWAEAKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K E L+I G+EAGIKSA+L I G AYG+LK E+G+HRLVRISP+++N +R TSF+S+ Sbjct: 121 YKVEILDILPGDEAGIKSASLKIMGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASL 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + +S +IEI D RIDTYRASGAGGQH+N TDSAVRITHIPTG+VVQ Q ERSQ Sbjct: 181 EVLPELTESQDIEIKSDDLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQSQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK A +ML++KL EL+ + +E EIGWG QIRSYV QPY MVKD RTN Sbjct: 241 FQNKDTAMSMLKSKLVELKERAHKEKIEDLSGDLKEIGWGSQIRSYVFQPYTMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355 E T+ V+DGD+D F+ L + K Sbjct: 301 TEMTNVDAVMDGDIDIFIVEYLKVNK 326 >gi|118617904|ref|YP_906236.1| peptide chain release factor 2 [Mycobacterium ulcerans Agy99] gi|166225111|sp|A0PQZ6|RF2_MYCUA RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|118570014|gb|ABL04765.1| peptide chain release factor 2 PrfB [Mycobacterium ulcerans Agy99] Length = 371 Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats. Identities = 160/357 (44%), Positives = 222/357 (62%), Gaps = 8/357 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D + R+ L + DP LW + A+ + E H + ++E+ Sbjct: 12 LDSALTTVERVLDVEGLRSRIEKLEHEASDPKLWDDQTRAQRVTSELSHTQGELRRVEEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQET---SDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + RL D +L ELA EE+ + + + ++ ++E + +LLSGE D +A + Sbjct: 72 RRRLEDLPVLYELAAEEEGAAAGEALTEADAEFKALRADIEATEVRTLLSGEYDEREALV 131 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGG ++ DWA ML+RMY RWAE+ K+ E + EEAGIKSAT + P AYG Sbjct: 132 TIRSGAGGVDAADWAEMLMRMYVRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYG 191 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+SG G Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 251 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK A +L+AKL E +KR E Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKLLE---RKRIEERAEL 308 Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 ++ K + G WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F++A + + Sbjct: 309 DALKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPATVLDGDIDGFLEAGIRWR 365 >gi|154507630|ref|ZP_02043272.1| hypothetical protein ACTODO_00111 [Actinomyces odontolyticus ATCC 17982] gi|153797264|gb|EDN79684.1| hypothetical protein ACTODO_00111 [Actinomyces odontolyticus ATCC 17982] Length = 373 Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats. Identities = 138/355 (38%), Positives = 211/355 (59%), Gaps = 3/355 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + D +++ LN K P LW + A+ + H + + I ++ Sbjct: 12 LRTTMENIIAVVQPDKLREQIVELNEKAAAPDLWDDPSAAQAVTSALSHRQSELDRITQM 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSNDAYLE 120 +R+ D ++++A E+ D K ++ + +LL GE D +A + Sbjct: 72 SERIDDLEAMVDMAAEDPDEGADILAEAEADLEKLRKDLGDLEIRTLLDGEYDERNAVIT 131 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + +GAGG ++ D+A +LLRMY RWAE+ + T+ ++ EEAG+KSAT ++ P AYG Sbjct: 132 IRSGAGGVDAADFAEILLRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVQAPYAYGT 191 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L E G HRLVRISP+D+ RR TSF+++ V P+++ + IEI ES+ ++D +R+SG GG Sbjct: 192 LSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIETTDHIEIPESELKVDVFRSSGPGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L L ++ + Sbjct: 252 QSVNTTDSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVLRHEEEQAKKKELA 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVLQPYQMVKDLRT E +P V DGD+D F+ A + +K Sbjct: 312 GD-VKASWGDQMRSYVLQPYQMVKDLRTEYESGNPQSVFDGDIDGFINAGIRWRK 365 >gi|260888149|ref|ZP_05899412.1| peptide chain release factor 1 [Selenomonas sputigena ATCC 35185] gi|330840016|ref|YP_004414596.1| Peptide chain release factor 1 [Selenomonas sputigena ATCC 35185] gi|260862178|gb|EEX76678.1| peptide chain release factor 1 [Selenomonas sputigena ATCC 35185] gi|329747780|gb|AEC01137.1| Peptide chain release factor 1 [Selenomonas sputigena ATCC 35185] Length = 355 Score = 245 bits (626), Expect = 6e-63, Method: Composition-based stats. Identities = 109/351 (31%), Positives = 182/351 (51%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D ++ L + DP + ++ + + L RE L + +E + L Sbjct: 1 MLDKLHAVEEKYRELESLISDPAVLADMPKWQKLSREHAQLAPVVEKYREYKKVREGLLE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 + + D + + + + ++ +E + L D+ + +E+ G GG Sbjct: 61 AKAIFDDNPDADMRRLAEEEIAELRPRLEALERELPILLLPKDPNDAKNVIVEIRGGVGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY R+AE+R ++ + ++ + E G K + G AY +LK E G Sbjct: 121 EEAALFAGDLFRMYARYAERRGWRVDVIDKNATEIGGFKEIAFSVDGAGAYSFLKYESGT 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S+ R HTS ++ V P ++ + +D RIDTY ASGAGGQ+VN T+ Sbjct: 181 HRVQRVPVTESSGRIHTSAVTVAVLPEAEEVEVEI-APADLRIDTYCASGAGGQYVNRTE 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 +A+RITH+PTG+VVQCQ E+SQ KNK +A +LRA++ LE + E+ A + K+++G Sbjct: 240 TAIRITHLPTGIVVQCQDEKSQLKNKEKAMRVLRARI--LEAAREEQAATVAADRKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + + VLDGDLD+ + A + + Sbjct: 298 SGDRSERIRTYNF-PQGRVTDHRIGLTLHKLAAVLDGDLDELLAALITADQ 347 >gi|187777237|ref|ZP_02993710.1| hypothetical protein CLOSPO_00784 [Clostridium sporogenes ATCC 15579] gi|187774165|gb|EDU37967.1| hypothetical protein CLOSPO_00784 [Clostridium sporogenes ATCC 15579] Length = 325 Score = 245 bits (626), Expect = 7e-63, Method: Composition-based stats. Identities = 150/323 (46%), Positives = 219/323 (67%), Gaps = 1/323 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++P+ W ++ EA+ + E ++L + +S +++ + D + L ++ L E+D + +E Sbjct: 1 MQNPNFWNDIKEAQKITSEEKYLKDKLSKYNHLKNTIEDIIGLSQM-LSEEDDDMGKEIL 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + IK E++ + E+LLSGE D N+A + +H+G GGT++QDW +ML RMYTRWAEK Sbjct: 60 SEYKNIKEEIDRFKIETLLSGEYDRNNAIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F + +++ + E+AGIKS TL I G YG+LKGE+G+HRLVRISP+++N +R TSF+SI Sbjct: 120 FTVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASI 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + D EIEI D +IDTYRA GAGGQHVN T+SAVRITHIPTG++VQCQ ERSQ Sbjct: 180 EVLPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK A +L+++L EL+ + +E ++GWG QIRSYV PY +VKD RT Sbjct: 240 HTNKETAMKVLKSRLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E ++ V++GD++ F+ L Sbjct: 300 AETSNVDAVMNGDINIFIIEYLK 322 >gi|190151400|ref|YP_001969925.1| peptide chain release factor 1 (RF-1) [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303250479|ref|ZP_07336676.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303251821|ref|ZP_07337992.1| Peptide chain release factor 1 (RF-1) [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307249121|ref|ZP_07531128.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307251520|ref|ZP_07533427.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307256019|ref|ZP_07537807.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307262579|ref|ZP_07544210.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|238692365|sp|B3GZJ0|RF1_ACTP7 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189916531|gb|ACE62783.1| Peptide chain release factor 1 (RF-1) [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302649251|gb|EFL79436.1| Peptide chain release factor 1 (RF-1) [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650467|gb|EFL80626.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306854409|gb|EFM86605.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306860984|gb|EFM92990.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306865441|gb|EFM97336.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306872077|gb|EFN03790.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 360 Score = 245 bits (626), Expect = 7e-63, Method: Composition-based stats. Identities = 113/344 (32%), Positives = 183/344 (53%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R L DP + + + + +E L+ ++ + D L Sbjct: 9 LESLSERHEELQALLGDPSVINDQDKFRAYSKEYSQLEEVVTTFNRWKKLNSDIEEAQIL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + E + +E Q L D +A+LE+ AG GG E+ +A Sbjct: 69 LDDPDMKEMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+ E ++++ E + ++ E+ G K + I G YG LK E G HR+ R+ Sbjct: 129 GDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPTDLRIDTYRSSGAGGQHVNTTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A +L +++ ++E +++ ++ + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQ--ADTRRNLLGSGDRSDK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +V++G +D+ ++ + + Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 349 >gi|301064303|ref|ZP_07204737.1| peptide chain release factor 2 [delta proteobacterium NaphS2] gi|300441582|gb|EFK05913.1| peptide chain release factor 2 [delta proteobacterium NaphS2] Length = 326 Score = 245 bits (625), Expect = 7e-63, Method: Composition-based stats. Identities = 158/326 (48%), Positives = 217/326 (66%), Gaps = 1/326 (0%) Query: 30 TEDPHLWQ-NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 WQ + E L +ER L I +++ + D +L E+ALEE D + L E Sbjct: 1 MSKADFWQRDQEEISRLNQERSALSEQIDTWEDLFRKTEDAALLAEMALEEKDKTTLSEV 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + +++R++ E++ + SLL D +A + ++AGAGGTE+QDW ML RMYTRWAE + Sbjct: 61 TRDVERLEREIKRLELRSLLGKPDDRRNAIVAINAGAGGTEAQDWVEMLFRMYTRWAEAK 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 K E ++ G+EAGIK+ + GP AYG+LK E G+HR+VRISP+D+ RRHTSF+S Sbjct: 121 GMKVEVIDFLAGDEAGIKNVDFTVTGPYAYGYLKSEHGIHRMVRISPFDATGRRHTSFAS 180 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P VD I IE+ E+D RIDTYRASG GGQHVN T SA+RITH+PT +VVQCQ E+S Sbjct: 181 VSVLPEVDLDINIEVDENDLRIDTYRASGPGGQHVNKTSSAIRITHLPTKIVVQCQNEKS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QH+NK A +L++KLYELE K E+ ++ +I WG QIRSYV PY+MVKD RT Sbjct: 241 QHRNKDMAMKVLKSKLYELEKNKLEQKKQEIHDTQKDIAWGSQIRSYVFNPYRMVKDHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354 N++ + V+DGD+D+F+ A L +K Sbjct: 301 NLDDGNVDKVMDGDIDEFIDAYLRMK 326 >gi|329120961|ref|ZP_08249592.1| peptide chain release factor RF2 [Dialister micraerophilus DSM 19965] gi|327471123|gb|EGF16577.1| peptide chain release factor RF2 [Dialister micraerophilus DSM 19965] Length = 328 Score = 245 bits (625), Expect = 8e-63, Method: Composition-based stats. Identities = 153/325 (47%), Positives = 215/325 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ + ++ +A ++ +R LL++A+EEDD + + Sbjct: 1 MSDPSFWDDSEKARAISQKATQAKDAYETYTKLFERAESLQELLDMAIEEDDQGMEGDLK 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + + K+ E LL+ E D+N+A + HAGAGGTE+QDW ML+RMY +WAE Sbjct: 61 QEIEELSAILNKKEIELLLNEEYDTNNAIITFHAGAGGTEAQDWTEMLIRMYIKWAESEG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + E L + G+EAGIKSA +IKG AYG LK E+GVHRLVRISP+D+ RRHTSFS++ Sbjct: 121 YGIEELNMLPGDEAGIKSAEYIIKGEFAYGLLKSEKGVHRLVRISPFDAAKRRHTSFSAV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + D IE++++ +D R+D YRASGAGGQHVN T SAVR+TH+PTG+V CQ ERSQ Sbjct: 181 DVMPEISDDIEVDLNMNDVRVDYYRASGAGGQHVNKTSSAVRMTHLPTGIVAACQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK Q +LRAKL+ELE++K E++ + + I WG QIRSYV QPY +VKD RT Sbjct: 241 TQNKEQCLRILRAKLFELEMKKHEQLKRNIQGEQQAIEWGSQIRSYVFQPYTLVKDNRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E + V+DGDL+ F++ L K Sbjct: 301 VETGNVQAVMDGDLNPFIEGFLKSK 325 >gi|73748409|ref|YP_307648.1| peptide chain release factor 2 [Dehalococcoides sp. CBDB1] gi|73660125|emb|CAI82732.1| peptide chain release factor 2 [Dehalococcoides sp. CBDB1] Length = 356 Score = 245 bits (625), Expect = 8e-63, Method: Composition-based stats. Identities = 147/340 (43%), Positives = 208/340 (61%), Gaps = 2/340 (0%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 FD ++ L T + +P WQ+ A+ M++ + ++ R+ D L Sbjct: 14 FDVSAKELEITELETASSNPDFWQDQQNAQKAMKKLAANKRTSELWRGLERRINDLTELA 73 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 L +D S+ E + + E++ + SG+ D+ +A L VHAGAGG ESQDW Sbjct: 74 VL--SREDPSLSNEIEHEISGLTAELDSLEVGLAFSGQYDNRNALLTVHAGAGGVESQDW 131 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A MLLRM+ RWAEK+ F E L+ GEEAGIKSATL I+G AYG+LK E GVHRL+R+ Sbjct: 132 AGMLLRMFMRWAEKKGFGMEILDQSLGEEAGIKSATLQIEGEYAYGFLKSEHGVHRLIRL 191 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+D++ RHTSF+ + + P +DS++I+I D +ID +R+SG GGQ+V +AVR+T Sbjct: 192 SPFDADHARHTSFALVEIMPEAEDSVDIDIKPEDIKIDMFRSSGPGGQNVQKVSTAVRVT 251 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 HIP+G+VV Q ERSQH+N+ A +L +KL +E+ KR E + + WG QIR Sbjct: 252 HIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKLKGERISAEWGSQIR 311 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 SYVL PY+MVKD RT+ E + VL+G+LD F+ A L Sbjct: 312 SYVLHPYKMVKDHRTDYEVGNAEAVLEGELDGFISAYLRQ 351 >gi|168182216|ref|ZP_02616880.1| peptide chain release factor 2 [Clostridium botulinum Bf] gi|237793493|ref|YP_002861045.1| peptide chain release factor 2 [Clostridium botulinum Ba4 str. 657] gi|182674541|gb|EDT86502.1| peptide chain release factor 2 [Clostridium botulinum Bf] gi|229262967|gb|ACQ54000.1| peptide chain release factor 2 [Clostridium botulinum Ba4 str. 657] Length = 325 Score = 245 bits (625), Expect = 8e-63, Method: Composition-based stats. Identities = 150/323 (46%), Positives = 217/323 (67%), Gaps = 1/323 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++P+ W ++ EA+ + E ++L + ++ +++ + D + L E+ L E+D + +E Sbjct: 1 MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEM-LSEEDDDMKKEII 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + IK E + + E+LLSGE D N+ + +H+G GGT++QDW +ML RMYTRWAEK Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F + +++ + E+AGIKS TL I G YG+LKGE+G+HRLVRISP+++N +R TSF+SI Sbjct: 120 FTVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASI 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + D EIEI D +IDTYRA GAGGQHVN T+SAVRITHIPTG++VQCQ ERSQ Sbjct: 180 EVLPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK A +L++KL EL+ + +E ++GWG QIRSYV PY +VKD RT Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E ++ V++GD++ F+ L Sbjct: 300 AETSNVDSVMNGDINIFITQYLK 322 >gi|283956828|ref|ZP_06374302.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 1336] gi|283791689|gb|EFC30484.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 1336] Length = 365 Score = 245 bits (625), Expect = 8e-63, Method: Composition-based stats. Identities = 168/353 (47%), Positives = 229/353 (64%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + +N RL + P W +V +A ++ +E+ + N + + Sbjct: 13 LKNKVGNIASIIKPENIKTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L +LA E+D L+ ++ +++ + + LLSGE D +A + +H Sbjct: 73 FNALNDASELFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA++L RMY R+ E+ FK E L+ +GEEAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANT--GE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+ + ++LDGD+ ++ L K Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363 >gi|95929408|ref|ZP_01312151.1| peptide chain release factor 2 [Desulfuromonas acetoxidans DSM 684] gi|95134524|gb|EAT16180.1| peptide chain release factor 2 [Desulfuromonas acetoxidans DSM 684] Length = 312 Score = 245 bits (625), Expect = 9e-63, Method: Composition-based stats. Identities = 159/306 (51%), Positives = 219/306 (71%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 ++ER L + + D +L+EL E +D + E + L ++ +V+ +F Sbjct: 2 LKERTALQKLVDGWTSAAQTVEDLEVLVELGAESEDEATRDEVRELLPELERQVDKMEFA 61 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LSGE DS++A L ++AGAGGTE+QDWA+MLLRMY R+ + + FKT+ + G++AG+ Sbjct: 62 RMLSGEHDSSNAILSINAGAGGTEAQDWADMLLRMYLRFCDIKGFKTKITDYQPGDDAGV 121 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KS T ++G AYGWL+ E G+HRLVRISP+D+ S+RHTSF S++V+P +DDSIE+E+ + Sbjct: 122 KSVTFTVEGDYAYGWLRPEMGIHRLVRISPFDAASKRHTSFCSVFVFPELDDSIEVELLD 181 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D +IDT+RASGAGGQH+N TDSA+RITHIP+G+VV CQ +RSQH NKA+A L+A+LY Sbjct: 182 KDMKIDTFRASGAGGQHINKTDSAIRITHIPSGIVVACQDQRSQHNNKAEAIRQLKARLY 241 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ELE QK+EE AN K EIGWG QIRSYVL PY+MVKD RT E + VLDG ++ Sbjct: 242 ELERQKKEEEANALSGDKKEIGWGSQIRSYVLHPYRMVKDHRTGFEVGNADSVLDGHIEG 301 Query: 346 FMKATL 351 F++A L Sbjct: 302 FIEAYL 307 >gi|288957379|ref|YP_003447720.1| peptide chain release factor RF-2 [Azospirillum sp. B510] gi|288909687|dbj|BAI71176.1| peptide chain release factor RF-2 [Azospirillum sp. B510] Length = 322 Score = 245 bits (625), Expect = 9e-63, Method: Composition-based stats. Identities = 191/309 (61%), Positives = 242/309 (78%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRER LD +++ + ++ L D+L L+E+ E+D +++ + L ++ Q E Sbjct: 1 MRERTQLDTSVAGYRALERDLSDSLELIEMGEMEEDATVVADAEAQLYGLRDRANKLQIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD+ND ++EV+AGAGGTE+QDWA ML+RMYTRWAE+ +KTE L+ GEEAGI Sbjct: 61 SLLSGEADANDCFVEVNAGAGGTEAQDWALMLMRMYTRWAEQHGYKTEWLDETPGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ IKG NAYGWLK E GVHRLVRISP+DS +RR TSF+++ + PV+DD I+IEI+E Sbjct: 121 KSATVQIKGHNAYGWLKTEAGVHRLVRISPFDSQARRQTSFAAVSISPVIDDKIDIEINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 DCRIDTYRASGAGGQH+N TDSAVRITHIPT +VV CQQERSQHKN+A+AW+MLRA+LY Sbjct: 181 KDCRIDTYRASGAGGQHINKTDSAVRITHIPTNIVVSCQQERSQHKNRAKAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+ RE+ A E++KT+IGWG QIRSYVL PYQMVKDLRT +E + VLDG LD Sbjct: 241 ERELKIREDAAAALEATKTDIGWGHQIRSYVLHPYQMVKDLRTEVETSQSQAVLDGALDP 300 Query: 346 FMKATLAIK 354 F++A LA + Sbjct: 301 FLEAALASR 309 >gi|157415680|ref|YP_001482936.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 81116] gi|172047182|sp|A8FNC2|RF2_CAMJ8 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|157386644|gb|ABV52959.1| peptide chain release factor RF-2 [Campylobacter jejuni subsp. jejuni 81116] gi|307748321|gb|ADN91591.1| Peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni M1] gi|315930963|gb|EFV09938.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 327] Length = 365 Score = 245 bits (625), Expect = 9e-63, Method: Composition-based stats. Identities = 168/353 (47%), Positives = 229/353 (64%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + +N RL + P W +V +A ++ +E+ + N + + Sbjct: 13 LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L +LA E+D L+ ++ +++ + + LLSGE D +A + +H Sbjct: 73 FNALNDASELFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA++L RMY R+ E+ FK E L+ +GEEAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSAN--AGE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+ + ++LDGD+ ++ L K Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363 >gi|104773716|ref|YP_618696.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116513713|ref|YP_812619.1| protein chain release factor B [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|103422797|emb|CAI97438.1| Peptide chain release factor 2 (RF-2) [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093028|gb|ABJ58181.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325125366|gb|ADY84696.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 332 Score = 245 bits (624), Expect = 9e-63, Method: Composition-based stats. Identities = 157/325 (48%), Positives = 202/325 (62%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N +A+ L+ E L ++ L D LEL E D + ++T Sbjct: 1 MAEPGFWDNQEKAQKLISETNLLKEKRDSFLALKKDLTDEETALELLRLEADADLQKDTE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 D L +++ E + LLSGE D ++A +E+H GAGGTE+ DW NMLLRMY R+ + R Sbjct: 61 DQLAKLQEEFHQYELNLLLSGEYDDHNALMEIHPGAGGTEAMDWGNMLLRMYQRYCDSRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 K E G+EAG+KS ++ I G NAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 121 LKFEVNNFEPGDEAGLKSVSVRISGKNAYGLLKSEHGVHRLVRISPFDSAKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P VDDSIEI+I D RID YR+SGAGGQH+N T SAVRITHIPTG+V Q +RSQ Sbjct: 181 EVIPEVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHIPTGIVTTSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A N +RAKL+ LE +K+ + + + +I WG QIRSYV PY MVKD RT Sbjct: 241 FQNRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQLDIAWGSQIRSYVFHPYSMVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DG LD F+ A L + Sbjct: 301 YETADVGGVMDGKLDPFIYAYLQWR 325 >gi|197123211|ref|YP_002135162.1| LigA [Anaeromyxobacter sp. K] gi|196173060|gb|ACG74033.1| LigA [Anaeromyxobacter sp. K] Length = 372 Score = 245 bits (624), Expect = 9e-63, Method: Composition-based stats. Identities = 169/351 (48%), Positives = 238/351 (67%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +LSR+L L G D + R++ ++ +EDP W + ++A+ L++E+ L+ Sbjct: 11 ELSRRLEALRGSLDVERKELRVAEISKLSEDPAFWTDNVKAQALLKEKAQLEQVTQACAA 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D L ELA E D + E ++ + + ++E + + +LSG D+ A +EV Sbjct: 71 VRRALDDAQALSELAEEARDDATRAEAAEAAEAVGRQLEGLELQKMLSGPHDAAGAIVEV 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG E+ DWA ML RMY R+ E+R ++ E ++ GEEAGI SA+ +++G + YGWL Sbjct: 131 KSGAGGVEAMDWAAMLYRMYVRYCERRGWEVEPADLVAGEEAGISSASFIVRGDHPYGWL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+D N+RR TSF+++ V P ++D I I+I E+D RIDTYR+SGAGGQ Sbjct: 191 KAEKGVHRLVRISPFDQNARRQTSFAAVDVTPEIEDDIVIDIKEADVRIDTYRSSGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VN TDSAVR+TH+PTG+VV Q ERSQ KN++ AW +LRAKLY+LE +KR + E+ Sbjct: 251 KVNKTDSAVRMTHLPTGIVVAVQNERSQQKNRSVAWKILRAKLYDLEEKKRAAARDAAEA 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K +I +G QIRSYVLQPYQMVKDLRT +E DVLDGDLD F++ L Sbjct: 311 LKKDIDFGSQIRSYVLQPYQMVKDLRTGVETGKVDDVLDGDLDPFIQPYLM 361 >gi|322513486|ref|ZP_08066596.1| peptide chain release factor RF1 [Actinobacillus ureae ATCC 25976] gi|322120705|gb|EFX92589.1| peptide chain release factor RF1 [Actinobacillus ureae ATCC 25976] Length = 360 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 112/344 (32%), Positives = 184/344 (53%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R L DP + + + + +E L+ ++ + D L Sbjct: 9 LESLSERHEELQALLGDPSVINDQDKFRAYSKEYSQLEEVVTTFNRWKKLNNDIEEAQIL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + E + +E Q L D +A+LE+ AG GG E+ +A Sbjct: 69 LDDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+ E ++++ E + ++ E+ G K + I G YG LK E G HR+ R+ Sbjct: 129 GDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A ++L +++ ++E +++ ++ + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKALSVLASRIVQVEQERQAAEQ--ADTRRNLLGSGDRSDK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ +V++G +D+ ++ + + Sbjct: 307 IRTYNY-PQGRITDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 349 >gi|153932889|ref|YP_001382578.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC 19397] gi|153936079|ref|YP_001386131.1| peptide chain release factor 2 [Clostridium botulinum A str. Hall] gi|152928933|gb|ABS34433.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC 19397] gi|152931993|gb|ABS37492.1| peptide chain release factor 2 [Clostridium botulinum A str. Hall] Length = 325 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 148/323 (45%), Positives = 216/323 (66%), Gaps = 1/323 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++P+ W ++ EA+ + E ++L + ++ +++ + D + L E+ L E+D + +E Sbjct: 1 MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEM-LSEEDDDMKKEII 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + IK E + + E+LLSGE D N+ + +H+G GGT++QDW +ML RMYTRWAEK Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F + +++ + E+AGIKS TL I G YG+LK E+G+HRLVRISP+++N +R TSF+SI Sbjct: 120 FAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASI 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + D EIEI D +IDTYRA GAGGQHVN T+SAVRITH+PTG++VQCQ ERSQ Sbjct: 180 EVLPELTDDQEIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK A +L++KL EL+ + +E ++GWG QIRSYV PY +VKD RT Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E ++ V++GD++ F+ L Sbjct: 300 AETSNVDSVMNGDINIFITQYLK 322 >gi|15827278|ref|NP_301541.1| peptide chain release factor 2 [Mycobacterium leprae TN] gi|221229756|ref|YP_002503172.1| peptide chain release factor 2 [Mycobacterium leprae Br4923] gi|6093957|sp|O32885|RF2_MYCLE RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|254790917|sp|B8ZUV0|RF2_MYCLB RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|2326693|emb|CAB11005.1| peptide chain release factor 2 [Mycobacterium leprae] gi|13092827|emb|CAC30176.1| putative peptide chain release factor 2 [Mycobacterium leprae] gi|219932863|emb|CAR70761.1| putative peptide chain release factor 2 [Mycobacterium leprae Br4923] Length = 374 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 156/358 (43%), Positives = 218/358 (60%), Gaps = 7/358 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D + R+ L + DP LW + + A+ + E H + I+E+ Sbjct: 12 LDSTLTTVERVLDVEGLRTRIEKLEHEASDPKLWDDQVRAQRVTSELSHAQGELRRIEEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSD------NLQRIKLEVEYKQFESLLSGEADSND 116 + RL D +L ELA EE + L+ +++++E + +LLSGE D + Sbjct: 72 RRRLDDLPVLYELAAEERAAAAASGMEAFAEADAELKALRVDIEATEVRTLLSGEYDERE 131 Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 A + + +GAGG ++ DWA ML+RMY RWAE+ K+ E L+ EEAG+KSAT + P Sbjct: 132 ALITIRSGAGGVDAADWAEMLMRMYIRWAEQHKYGVEVLDTSYAEEAGVKSATFAVHAPF 191 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 AYG L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+S Sbjct: 192 AYGTLASEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVEITDHIDIPEGDVRVDVYRSS 251 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQ VNTTDSAVR+TH+PTG+VV CQ E+SQ +NK A +L+AKL E + + Sbjct: 252 GPGGQSVNTTDSAVRLTHVPTGLVVTCQNEKSQLQNKVSAMRVLQAKLLERKRLEERAEL 311 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + + WG QIRSYVL PYQMVKDLR E +P+ VLDGD+D F++A + + Sbjct: 312 DALKGRGGS-SWGNQIRSYVLHPYQMVKDLRNEYEVGNPTAVLDGDIDGFLEAGIRWR 368 >gi|306823395|ref|ZP_07456770.1| peptide chain release factor RF2 [Bifidobacterium dentium ATCC 27679] gi|309802644|ref|ZP_07696748.1| peptide chain release factor 2 [Bifidobacterium dentium JCVIHMP022] gi|304553102|gb|EFM41014.1| peptide chain release factor RF2 [Bifidobacterium dentium ATCC 27679] gi|308220708|gb|EFO77016.1| peptide chain release factor 2 [Bifidobacterium dentium JCVIHMP022] Length = 380 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 138/353 (39%), Positives = 211/353 (59%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + D D + L + +P LW + A+ + + + + + + Sbjct: 16 EARAKYESISKALDVDRLTVQAKELEVQATEPGLWDDPENAQKITSKLSAVQSQLKRLAS 75 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 R+ D L+EL EE+D L+E + ++ I+ +++ + ++LL GE D A + + Sbjct: 76 ASQRIDDVETLVELGREEEDADTLEEAKNEIEGIRHDLDDMEIQTLLDGEYDERSAVVTI 135 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A MLLRMY RWAE+ +K + ++ EEAGIKSAT + P AYG + Sbjct: 136 RSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRM 195 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+V+ + I++ +S+ R+DTY +SG GGQ Sbjct: 196 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQ 255 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTT SAVRITHIPTG+VV Q ERSQ +N+A A +L+++L L ++ + Sbjct: 256 GVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHEEEAKKKKELAG 315 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD+D F++A + + Sbjct: 316 D-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAGIRWR 367 >gi|260663162|ref|ZP_05864054.1| peptide chain release factor 2 [Lactobacillus fermentum 28-3-CHN] gi|260552354|gb|EEX25405.1| peptide chain release factor 2 [Lactobacillus fermentum 28-3-CHN] Length = 332 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 161/324 (49%), Positives = 207/324 (63%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + A+ + L +QD++ + + E+ E D + E Sbjct: 1 MTAPDFWDDNQRAQEKVAALNELKKRRDNFLTLQDQVEELALTAEMLQAEPDPELKAELD 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +N ++ + + E LL G D +DA LE+H GAGGTE+QDW MLLRMY RWA + Sbjct: 61 NNFPGVQEHLRAYRLEQLLDGPYDQSDAILEIHPGAGGTEAQDWGEMLLRMYMRWANQHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E GEEAGIKS TLLIKG NAYG+L E+GVHRLVRISP+DS +RRHTSF+S+ Sbjct: 121 FAVETANYEAGEEAGIKSVTLLIKGHNAYGYLHPEKGVHRLVRISPFDSAARRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P++D+SIE+EI SD R+DT+RASGAGGQH+N T+SAVRITH+PTG+V Q ERSQ Sbjct: 181 DVMPILDESIEVEIDPSDLRVDTFRASGAGGQHINKTESAVRITHLPTGIVTSSQAERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A NML++KLYELE +K+ + E + EIGWG QIRSYV PY +VKD RT Sbjct: 241 LQNRITAMNMLKSKLYELEEEKKAKERAQIEGEQREIGWGSQIRSYVFHPYTLVKDARTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E V+DGDLD F+ A L Sbjct: 301 YETHDVIGVMDGDLDPFINAYLQW 324 >gi|300813058|ref|ZP_07093436.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|313123317|ref|YP_004033576.1| bacterial peptide chain release factor 2 (brf-2) [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|300495899|gb|EFK31043.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|312279880|gb|ADQ60599.1| Bacterial peptide chain release factor 2 (BRF-2) [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 332 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 157/325 (48%), Positives = 202/325 (62%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N +A+ L+ E L ++ L D LEL E D + ++T Sbjct: 1 MAEPGFWDNQEKAQKLISETNLLKEKRDSFLALEKDLTDEETALELLRLEADADLQKDTE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 D L +++ E + LLSGE D ++A +E+H GAGGTE+ DW NMLLRMY R+ + R Sbjct: 61 DQLAKLQEEFHQYELNLLLSGEYDDHNALMEIHPGAGGTEAMDWGNMLLRMYQRYCDSRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 K E G+EAG+KS ++ I G NAYG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 121 LKFEVNNFEPGDEAGLKSVSVRISGKNAYGLLKSEHGVHRLVRISPFDSAKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P VDDSIEI+I D RID YR+SGAGGQH+N T SAVRITHIPTG+V Q +RSQ Sbjct: 181 EVIPEVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHIPTGIVTTSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A N +RAKL+ LE +K+ + + + +I WG QIRSYV PY MVKD RT Sbjct: 241 FQNRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQLDIAWGSQIRSYVFHPYSMVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DG LD F+ A L + Sbjct: 301 YETADVGGVMDGKLDPFIYAYLQWR 325 >gi|111220808|ref|YP_711602.1| peptide chain release factor 2 [Frankia alni ACN14a] gi|111148340|emb|CAJ60012.1| peptide chain release factor RF-2 [Frankia alni ACN14a] Length = 369 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 147/354 (41%), Positives = 213/354 (60%), Gaps = 4/354 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L+ + + D + +R L + DP LW + A+++ R IS ++ Sbjct: 14 QLDATLSGIESVLDVEGLRRRAEELERQAADPDLWSDQDRAQVVTRRLSSTRGDISRVEG 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ RL D +L ++ + ++ + +LLSGE D DA +++ Sbjct: 74 LRRRLDDIAAAADLGDDDLLAEAAADLPALNG----DISALEVRTLLSGEFDERDAIVQL 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG ++ DW MLLRMY RWAE+ + TE + + EEAG+KSAT +K P AYG L Sbjct: 130 SAGAGGVDAADWTAMLLRMYLRWAERHGYPTEVFDTSEAEEAGLKSATFQVKAPYAYGTL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVRISP+D+ +RR TSF+ + V PVV+ S ++I + D RID +R+SG GGQ Sbjct: 190 RSEHGVHRLVRISPFDNQNRRQTSFAGVEVTPVVELSDHVDIDDKDLRIDIFRSSGPGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PT +VV CQ ERSQ +NKA A +L+AKL E + Sbjct: 250 GVNTTDSAVRITHLPTNIVVTCQNERSQLQNKAAAMIVLQAKLLERRRAEEAAAKQRITG 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 ++ +G QIR+YVL PYQ+VKDLRT+ E ++ VLDG+LD+F+ A + ++ Sbjct: 310 GPQDVSFGSQIRNYVLHPYQLVKDLRTDTETSNTGGVLDGELDNFIDAEIRWRR 363 >gi|325684476|gb|EGD26640.1| peptide chain release factor RF2 [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 332 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 156/325 (48%), Positives = 201/325 (61%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N +A+ L+ E L ++ L D LEL E D + ++T Sbjct: 1 MAEPGFWDNQEKAQKLISETNLLKEKRDSFLALEKDLTDEETALELLRLEADADLQKDTE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 D L +++ E + LLSGE D ++A +E+H GAGGTE+ DW NMLLRMY R+ + R Sbjct: 61 DQLAKLQEEFHQYELNLLLSGEYDDHNALMEIHPGAGGTEAMDWGNMLLRMYQRYCDSRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 K E G+EAG+KS ++ I G N YG LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 121 LKFEVNNFEPGDEAGLKSVSVRISGKNTYGLLKSEHGVHRLVRISPFDSAKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P VDDSIEI+I D RID YR+SGAGGQH+N T SAVRITHIPTG+V Q +RSQ Sbjct: 181 EVIPEVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHIPTGIVTTSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A N +RAKL+ LE +K+ + + + +I WG QIRSYV PY MVKD RT Sbjct: 241 FQNRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQLDIAWGSQIRSYVFHPYSMVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E V+DG LD F+ A L + Sbjct: 301 YETADVGGVMDGKLDPFIYAYLQWR 325 >gi|242041179|ref|XP_002467984.1| hypothetical protein SORBIDRAFT_01g037550 [Sorghum bicolor] gi|241921838|gb|EER94982.1| hypothetical protein SORBIDRAFT_01g037550 [Sorghum bicolor] Length = 467 Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats. Identities = 152/351 (43%), Positives = 222/351 (63%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +++ + + W ++R L E P LW++ + A + RE+ L I + + Sbjct: 107 VAQSVKLIKKRLKWGWILERTKQLAVVLERPDLWEDPVFAGRVSREQGELMGKIKSVNQF 166 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L +++ +L LA EE+D + E+ L ++ + K+ +LLSG+ DS ++EV Sbjct: 167 EQELIEHIEMLRLAREENDNELEMESMRALADMRRSAKEKELNALLSGDNDSCPCFIEVQ 226 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA M++ MY WA++R + +E GE AGIK AT+ + G A+G+ K Sbjct: 227 AGAGGTESMDWAAMVMNMYRSWAQRRGYTVTVVEEMPGEVAGIKRATIKVDGEYAFGYAK 286 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVRISP+DS RRHTSF+++ V P+ D + +I +SD RI+ +R+ G GGQ Sbjct: 287 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDAASRYQIKDSDLRIERFRSGGPGGQ 346 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H NTT+SA+RI HIPTG+ CQ ERSQH NKA A +L+++L +LE+ ++ ++ Sbjct: 347 HANTTESAIRIVHIPTGISATCQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNAEHTQ 406 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 S EI WG QIRSYVL PY+MVKDLRTN E + P VL+GD+DDF+ L+ Sbjct: 407 SLNEISWGNQIRSYVLHPYRMVKDLRTNYEVSDPDSVLEGDIDDFILNYLS 457 >gi|29839933|ref|NP_829039.1| peptide chain release factor 2 [Chlamydophila caviae GPIC] gi|29834280|gb|AAP04917.1| peptide chain release factor 2 [Chlamydophila caviae GPIC] Length = 337 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 155/329 (47%), Positives = 211/329 (64%), Gaps = 1/329 (0%) Query: 25 FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84 L +T WQ+V A + L IS +E + ++ + L + D + Sbjct: 3 ELEDQTLKEDFWQDVAHAGKVSERVASLKRQISDYEEFKSKVDNLTFFLNDSEASSDPEL 62 Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 ++ + + + + LLSGE D N +L ++AGAGGTES DW ML RMY+RW Sbjct: 63 REDLEKEFSVCETILAEWETQRLLSGEVDKNPCFLTINAGAGGTESCDWVEMLFRMYSRW 122 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 A ++K E ++ +G+ AGIK T+ G AYG+ K E+GVHRLVRISP+DSN++RHT Sbjct: 123 ASHHQWKAEVIDRQEGDVAGIKHITVKFSGEYAYGYAKAERGVHRLVRISPFDSNAKRHT 182 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 SF+S+ VYP +DD IEI+I +D RIDTYR+SGAGGQHVN TDSAVRITHIPTG++V CQ Sbjct: 183 SFASVDVYPEIDDEIEIDIRPNDLRIDTYRSSGAGGQHVNVTDSAVRITHIPTGIIVSCQ 242 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 ERSQ +N+ MLRA++Y+ LQ+R E + +K EI WG QIR+YV QPY +VK Sbjct: 243 SERSQIQNRESCMKMLRARMYQQVLQERLEKQLLDRKNKKEIAWGSQIRNYVFQPYTLVK 302 Query: 325 DLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 D+RT E + ++DG+ LDDF+KA LA Sbjct: 303 DMRTGHETGNVQAMMDGELLDDFVKAYLA 331 >gi|313672261|ref|YP_004050372.1| bacterial peptide chain release factor 1 (brf-1) [Calditerrivibrio nitroreducens DSM 19672] gi|312939017|gb|ADR18209.1| bacterial peptide chain release factor 1 (bRF-1) [Calditerrivibrio nitroreducens DSM 19672] Length = 356 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 124/351 (35%), Positives = 194/351 (55%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + +++ + L K DP++ ++ + L +E L + E +D Sbjct: 1 MFDHLEEVLEKYNELTEKLADPNVMSDIKVYQQLSKEHSDLKPIVEKYLEYKDVQRSIKE 60 Query: 72 LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + + D +++ ++++ E + L D + Y+E+ AG GG Sbjct: 61 AEAILKDGGDKDLIELAEIELAEGKEKLEKISEELKILLLPKDPFDEKNIYIEIRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 ES +A LLRMY R+AEK +KTE ++ ++ G K LL+KG NAY LK E G Sbjct: 121 EESALFAADLLRMYIRYAEKCGWKTEIIDANETGMGGYKEVILLVKGKNAYSKLKYEAGG 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +S+ R HTS ++ V P D +++ I D RID YR+SGAGGQHVNTTD Sbjct: 181 HRVQRIPETESSGRIHTSACTVAVIP-EADDVDVHIDPKDLRIDVYRSSGAGGQHVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTG+VV CQ ERSQ KNK +A +L++K++E+EL+++ E+ K ++G Sbjct: 240 SAVRITHIPTGIVVSCQDERSQIKNKEKAMKLLKSKIFEMELERQRTEQ--AENRKQQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P + D R N+ + V++G+LD+ + A + + Sbjct: 298 SGDRSERIRTYNF-PQNRLTDHRINLTVYNLDMVMEGELDEIIDALITYDQ 347 >gi|187930213|ref|YP_001900700.1| peptide chain release factor 1 [Ralstonia pickettii 12J] gi|238691828|sp|B2UDM7|RF1_RALPJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|187727103|gb|ACD28268.1| peptide chain release factor 1 [Ralstonia pickettii 12J] Length = 360 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 119/344 (34%), Positives = 183/344 (53%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +R+ +N N+ + + L RE L+ ++ + D EL Sbjct: 9 LDQLAERIVEINALLAREDATANLDQYRKLTREHAELEPVVAQFAAWKQAEEDIATAQEL 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 A + D + ++ +R++ Q L D + ++E+ AG GG ES +A Sbjct: 69 AADPDMKAFAEDELRAARERMESLEGELQRLLLPKDPNDHRNIFVEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE+++++ E + + G K + G AY LK E G HR+ R+ Sbjct: 129 GDLLRMYTRYAERQRWQVEIVSESPSDLGGYKEVIARLVGEGAYSRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D +I+I+ +D RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 189 ATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDTFRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQH+NK +A +L A+L + Q+RE A + K+ IG G + Sbjct: 249 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKD--RQEREAQAKEASARKSLIGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ ++DGD+D+ + A A + Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKIDAIMDGDIDELVGALAAEHQ 349 >gi|299782886|gb|ADJ40884.1| Peptide chain release factor RF2 [Lactobacillus fermentum CECT 5716] Length = 332 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 162/324 (50%), Positives = 207/324 (63%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + A+ + L +QD++ + + E+ E D + E Sbjct: 1 MTAPDFWDDNQRAQEKVAALNELKKRRDNFLTLQDQVEELALTAEMLQAEPDPELKAELD 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 DN ++ + + E LL G D +DA LE+H GAGGTE+QDW MLLRMY RWA + Sbjct: 61 DNFPGVQEHLRAYRLEQLLDGPYDQSDAILEIHPGAGGTEAQDWGEMLLRMYMRWANQHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E GEEAGIKS TLLIKG NAYG+L E+GVHRLVRISP+DS +RRHTSF+S+ Sbjct: 121 FAVETANYEAGEEAGIKSVTLLIKGHNAYGYLHPEKGVHRLVRISPFDSAARRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P++D+SIE+EI SD R+DT+RASGAGGQH+N T+SAVRITH+PTG+V Q ERSQ Sbjct: 181 DVMPILDESIEVEIDPSDLRVDTFRASGAGGQHINKTESAVRITHLPTGIVTSSQAERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A NML++KLYELE +K+ + E + EIGWG QIRSYV PY +VKD RT Sbjct: 241 LQNRITAMNMLKSKLYELEEEKKAKERAQIEGEQREIGWGSQIRSYVFHPYTLVKDARTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E V+DGDLD F+ A L Sbjct: 301 YETHDVIGVMDGDLDPFINAYLQW 324 >gi|283955061|ref|ZP_06372564.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 414] gi|283793428|gb|EFC32194.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 414] Length = 366 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 169/353 (47%), Positives = 231/353 (65%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + +N RL + P W +V +A ++ +E+ + N + + Sbjct: 13 LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGVIGKEKTKITNLLKNYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L +LA E+D L+ +++ +++ + + LLSGE DS +A + +H Sbjct: 73 FNALNDASELFDLANSENDTETLEALFNDVPKLEDTITSLEISMLLSGENDSKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA++L RMY R+ E+ FK E L+ +GEEAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELLKQQDNAN--AGE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+ + ++LDGD+ ++ L K Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363 >gi|154175392|ref|YP_001408592.1| peptide chain release factor 2 [Campylobacter curvus 525.92] gi|112803979|gb|EAU01323.1| peptide chain release factor 2 [Campylobacter curvus 525.92] Length = 372 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 168/354 (47%), Positives = 234/354 (66%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ ++ +G + + +RL + +P WQ++ +A L +E+ + N ++ Sbjct: 16 RLNTKVENIGSIIKPQSIKERLQEIERLEHEPDFWQDIAKAGALNKEKTKISNMLAKFTN 75 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D L ELA E D L D+ ++ ++ + LLSGE D+ +A + + Sbjct: 76 AKAAVDDAKELYELANSESDEETLNSLFDDATELENKITALEISMLLSGEDDNKNAIISI 135 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTES DWA+ML RMY R+ E+ FK E L+ +G+EAG+K + ++KG NAYG+L Sbjct: 136 HPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGDEAGLKDVSFIVKGENAYGYL 195 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D +IDTYRASGAGGQ Sbjct: 196 KAENGIHRLVRTSPFDSAGRRHTSFSSVMVSPEIDDDIEIEIEEKDLKIDTYRASGAGGQ 255 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SA+RITH+PTG+VVQCQ +RSQHKN+A A ML+++LYELEL K++E +N E Sbjct: 256 HVNKTESAIRITHMPTGIVVQCQNDRSQHKNRATAMKMLKSRLYELELMKQQEASNSVE- 314 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+ + +LDGD+ ++ L +K Sbjct: 315 -KSEIGWGHQIRSYVLFPYQQVKDNRSGQAFSQTDAILDGDIKKMIEGVLISQK 367 >gi|86149455|ref|ZP_01067686.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni CF93-6] gi|86151896|ref|ZP_01070109.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 260.94] gi|88596537|ref|ZP_01099774.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 84-25] gi|148925627|ref|ZP_01809315.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni CG8486] gi|205356111|ref|ZP_03222878.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni CG8421] gi|218563058|ref|YP_002344837.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315124892|ref|YP_004066896.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|24638160|sp|Q9PMK5|RF2_CAMJE RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|85840237|gb|EAQ57495.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni CF93-6] gi|85841004|gb|EAQ58253.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 260.94] gi|88191378|gb|EAQ95350.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 84-25] gi|112360764|emb|CAL35563.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|145845637|gb|EDK22728.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni CG8486] gi|205345954|gb|EDZ32590.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni CG8421] gi|284926663|gb|ADC29015.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni IA3902] gi|315018614|gb|ADT66707.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315927400|gb|EFV06738.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315930833|gb|EFV09825.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 305] Length = 365 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 168/353 (47%), Positives = 229/353 (64%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + +N RL + P W +V +A ++ +E+ + N + + Sbjct: 13 LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L +LA E+D L+ ++ +++ + + LLSGE D +A + +H Sbjct: 73 FNALNDASELFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA++L RMY R+ E+ FK E L+ +GEEAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANT--GE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+ + ++LDGD+ ++ L K Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363 >gi|325916711|ref|ZP_08178968.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas vesicatoria ATCC 35937] gi|325537060|gb|EGD08799.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas vesicatoria ATCC 35937] Length = 329 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 170/318 (53%), Positives = 224/318 (70%), Gaps = 1/318 (0%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W + A+ L RER L+ + I ++ L D LL+LA E D +L + Sbjct: 2 WNDAERAQALGRERSMLEKTVIGIADVLAGLTDAGELLDLADSEQDEDTAVAVIADLDKY 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + VE +F+ + SG+ D +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE + Sbjct: 62 QAHVEKLEFQRMFSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTELM 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E+ GE AGIKSAT+ I+G AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P V Sbjct: 122 EVSGGEVAGIKSATIRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEV 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT VV CQ RSQH+N+ Sbjct: 182 DDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRDN 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A ML AKLYELE+QKR + E++K++IGWG QIR+YVL +KDLRT IE++ Sbjct: 242 AMKMLAAKLYELEVQKRNVERDALEATKSDIGWGSQIRNYVLD-QSRIKDLRTGIERSDT 300 Query: 336 SDVLDGDLDDFMKATLAI 353 VLDGDLD+F++A+L Sbjct: 301 QKVLDGDLDEFVEASLKA 318 >gi|305679674|ref|ZP_07402484.1| peptide chain release factor 2 [Corynebacterium matruchotii ATCC 14266] gi|305660294|gb|EFM49791.1| peptide chain release factor 2 [Corynebacterium matruchotii ATCC 14266] Length = 368 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 153/353 (43%), Positives = 218/353 (61%), Gaps = 3/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + + + R L K DP LW + A+ + E + + ++ + Sbjct: 12 LDTTLTSIEKVMNPADLSDRARELAAKAADPSLWDDPEHAQQVTSELSQVQVQLKRLQSL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D I+ EL E++ + L ++ +++ + ++LSGE DS +A + + Sbjct: 72 RSRLTDLPIMYEL--AEEEGEGTDIADEELTDLRADIDALEVTTMLSGEYDSREALINIR 129 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ DWA ML+RMY RWAEK+ K E +I EEAGIKSAT ++ G YG L Sbjct: 130 SGAGGVDAADWAEMLMRMYIRWAEKQGRKVEVYDISYAEEAGIKSATFIVHGEYMYGTLS 189 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQGVHRLVRISP+D+ +RR TSF+ + V PVV+ + I+I +S+ R+D YR+SG GGQ Sbjct: 190 VEQGVHRLVRISPFDNQARRQTSFAEVEVLPVVEITDHIDIPDSELRVDVYRSSGPGGQS 249 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + Q+ + + Sbjct: 250 VNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASALRVLQAKLLERKRQEERAELDALGAG 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+R+YVL P+QMVKDLRT E P VLDGDLD F++A + +K Sbjct: 310 -GNASWGNQMRNYVLHPFQMVKDLRTGFEVGDPQKVLDGDLDKFLEAGIRWRK 361 >gi|283457761|ref|YP_003362349.1| protein chain release factor B [Rothia mucilaginosa DY-18] gi|283133764|dbj|BAI64529.1| protein chain release factor B [Rothia mucilaginosa DY-18] Length = 421 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 137/356 (38%), Positives = 216/356 (60%), Gaps = 4/356 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + D + + + L+ + P LW +V A+ + + + ++ ++ Sbjct: 58 ELRAIFTSIAAVSDIEGIERAIEDLSAQAAAPDLWDDVENAQKVTSALSYKQSELNRLRS 117 Query: 62 IQDRLCDNLILLELALEEDDCSILQ---ETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 + R+ D +++ELA ED+ + + + I+ ++E + LLSGE D +A Sbjct: 118 LSSRIDDVEVMVELAEAEDEETAAELLADAERECAEIRAKLEELEVLVLLSGEYDQREAV 177 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + + +GAGG ++ D+A MLLRMY RWAEK + T+ L+ EEAG+KS T + P A+ Sbjct: 178 VTIRSGAGGVDAADFAEMLLRMYLRWAEKNGYPTKVLDTSYAEEAGLKSVTFEVNAPYAF 237 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G L E G HRLVRISP+D+ RR TSF+++ V P+++ + IEI ES+ ++D +R+SG Sbjct: 238 GRLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDAIEIPESEIKVDVFRSSGP 297 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTTDSAVR+TH+PTG+VV Q E+SQ +N+A A +L+++L L ++ + Sbjct: 298 GGQSVNTTDSAVRMTHLPTGIVVSMQNEKSQLQNRAAALRVLQSRLLLLRKEQEDAKKKE 357 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E+ + S+VLDG L+ F+ A + + Sbjct: 358 LAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYEEGNTSNVLDGGLNAFIDAGIRWR 412 >gi|87300848|ref|ZP_01083690.1| peptide chain release factor 2 [Synechococcus sp. WH 5701] gi|87284719|gb|EAQ76671.1| peptide chain release factor 2 [Synechococcus sp. WH 5701] Length = 355 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 144/343 (41%), Positives = 207/343 (60%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD R L P W + +A+ MR+ + + +++ + + D Sbjct: 3 RTVFDVPALNARQQDLEQLASQPDFWDDQQQAQKQMRQLDEVKAQLEQLQQWRTAVDDAR 62 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LEL E D +L E + LQ +K ++ + E LLSG D A + ++AGAGGT++ Sbjct: 63 ATLELYDLEPDEELLSEANGGLQSLKAALDRWELERLLSGPYDKEGAVISINAGAGGTDA 122 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA ML+RMYTRWAE K E+ +GEEAGIKS T+ I G AYG+L+ E+G HRL Sbjct: 123 QDWALMLMRMYTRWAEDHGMKVSVDELSEGEEAGIKSCTIEIDGRYAYGYLRNEKGTHRL 182 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+++N +R TSF+ + V P +++ ++++I + D + T R+ GAGGQ+VN ++AV Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKLEEDVKLDIPDKDLEVTTSRSGGAGGQNVNKVETAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RI H+PTG+ V+C QERSQ +NK +A +L AKL + ++R E WG Sbjct: 243 RILHVPTGLAVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRASEIADIRGDIVEAAWGN 302 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIR+YV PYQMVKDLRT +E T V+DGDLD F++A L Sbjct: 303 QIRNYVFHPYQMVKDLRTAVETTDVQGVMDGDLDPFIQALLRQ 345 >gi|330444184|ref|YP_004377170.1| peptide chain release factor 2 [Chlamydophila pecorum E58] gi|328807294|gb|AEB41467.1| Peptide chain release factor 2 [Chlamydophila pecorum E58] Length = 344 Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats. Identities = 154/337 (45%), Positives = 214/337 (63%), Gaps = 1/337 (0%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 + L L ++ + W++V++A + + L +S E+Q ++ L Sbjct: 2 EGKEATLRELEKQSAQENFWEDVVKAGKISEQIAALKRQLSEYSELQKKIETIEFFLNDN 61 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 D + +E + + + + LLSGE D N +L ++AGAGGTES DW M Sbjct: 62 EACADPEVGKELEKEFAFCESCLAVWETQRLLSGEVDKNSCFLSINAGAGGTESCDWVEM 121 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L RMY+RWA + +K + ++ DGE AGIK TL + G AYG+ K E GVHRLVRISP+ Sbjct: 122 LFRMYSRWASRHHWKVDVIDRLDGEVAGIKHITLKLTGEYAYGYAKAESGVHRLVRISPF 181 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 DSN++RHTSF+S+ V+P VDD I+IEI +D RIDT+R+SGAGGQHVN T+SAVRITH+P Sbjct: 182 DSNAKRHTSFASVDVFPEVDDQIQIEILPNDLRIDTFRSSGAGGQHVNVTESAVRITHLP 241 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316 TG+VV CQ ERSQ +N+ +LRA+LY+ ELQ+R E + K EI WG QIR+YV Sbjct: 242 TGIVVSCQNERSQLQNRESCMKVLRARLYQRELQERLERRLLERKDKKEIAWGSQIRNYV 301 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 QPY +VKD+RT E + ++DG+ LD+F+K LA Sbjct: 302 FQPYTLVKDVRTGYEVGNIQAMMDGELLDEFIKVYLA 338 >gi|319407240|emb|CBI80879.1| peptide chain release factor RF-2 [Bartonella sp. 1-1C] Length = 333 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 216/320 (67%), Positives = 264/320 (82%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 LW + +A+ +MRERQ+L+++++ + L + + L+ + EE+D I+ E + +++ Sbjct: 2 LWNDARKAQDMMRERQNLEDSMNSTQLFTQTLEECIELIAMGEEENDVEIITEAENTIRQ 61 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 +K E++ KQ +LLSGEADSND YLE+HAGAGGTESQDWA+MLLRMYTRWAE+ K K E Sbjct: 62 LKSEIDKKQIATLLSGEADSNDTYLEIHAGAGGTESQDWASMLLRMYTRWAEQHKMKVEV 121 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 LE HDGEEAGIKSAT+L+KG NAYG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPV Sbjct: 122 LETHDGEEAGIKSATILVKGHNAYGLLKTESGVHRLVRISPYDSNARRHTSFASIWVYPV 181 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 VD++IEI++SE+D RIDTYRASGAGGQHVNTTDSAVRITHI T +VVQCQ ERSQHKNKA Sbjct: 182 VDENIEIDLSEADVRIDTYRASGAGGQHVNTTDSAVRITHIKTDIVVQCQTERSQHKNKA 241 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 AW+MLRA+LYE EL+KREE N E+SKTEIGWG QIRSYVLQPYQ+VKDLRT +E T Sbjct: 242 TAWSMLRARLYEEELKKREEATNAVEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTD 301 Query: 335 PSDVLDGDLDDFMKATLAIK 354 P VL+GDLD F++A LA + Sbjct: 302 PQTVLNGDLDTFIEAALAQR 321 >gi|317179974|dbj|BAJ57760.1| peptide chain release factor 2 [Helicobacter pylori F32] Length = 381 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 174/352 (49%), Positives = 241/352 (68%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 31 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 90 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L ++ L ELA ++D L + ++ V+ + E +LSGE D+++A + + Sbjct: 91 KNSLDESTELFELAQNDNDEVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQ 150 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 151 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 210 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 211 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 270 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 271 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 328 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 329 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 380 >gi|325922147|ref|ZP_08183937.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas gardneri ATCC 19865] gi|325547382|gb|EGD18446.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas gardneri ATCC 19865] Length = 329 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 170/318 (53%), Positives = 224/318 (70%), Gaps = 1/318 (0%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W + A+ L RER L+ + I ++ L D LLELA E D +L + Sbjct: 2 WNDSERAQALGRERSMLEKTVIGIADVLAGLADAADLLELAESEQDEDTAVAVLADLDKY 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 ++ VE +F+ + SG+ D +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE + Sbjct: 62 QVHVEKLEFQRMFSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTELM 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E+ GE AGIKSAT+ I+G YGWLK E GVHRLVR SP+DS++RRHTSF+S++V P V Sbjct: 122 EVSGGEVAGIKSATIRIEGEFVYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEV 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT VV CQ RSQH+N+ Sbjct: 182 DDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRDN 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A ML AKLYELE+QKR + E++K++IGWG QIR+YVL +KDLRT IE++ Sbjct: 242 AMKMLAAKLYELEVQKRNVERDALEATKSDIGWGSQIRNYVLD-QSRIKDLRTGIERSDT 300 Query: 336 SDVLDGDLDDFMKATLAI 353 VLDGDLD+F++A+L Sbjct: 301 QKVLDGDLDEFVEASLKA 318 >gi|237748574|ref|ZP_04579054.1| peptide chain release factor 1 [Oxalobacter formigenes OXCC13] gi|229379936|gb|EEO30027.1| peptide chain release factor 1 [Oxalobacter formigenes OXCC13] Length = 360 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 116/344 (33%), Positives = 182/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + RL+ ++ P + + + L +E L ++ + D E+ Sbjct: 9 LEQLANRLTEIDELLMQPDVASDQDNYRKLSKEHAELGPVVALYNDYVQVQADVDAAQEM 68 Query: 76 ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + QE + ++ + Q L D + +LE+ AG GG ES +A Sbjct: 69 LADPEMKEFAQEEISAAEGKMTAIEDDLQLMLLPKDPNDDKNIFLEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY+R+AEK ++K E + + E G + + + G + Y LK E G HR+ R+ Sbjct: 129 ADLLRMYSRFAEKNRWKVEIVSASESELGGYREVIVRLIGNDVYSRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P DD ++ I+ +D RIDT+RASGAGGQH+N TDSA+RITH Sbjct: 189 VTETQGRIHTSACTVAVMPEADDVSDVHINPADIRIDTFRASGAGGQHINKTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 PTG+VV+CQ +RSQHKNKAQA +L A++ + ++Q E+ A + K+ IG G + Sbjct: 249 FPTGIVVECQDDRSQHKNKAQAMQVLAARIKDRQMQ--EQHAKEAATRKSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ ++DGD+D+ + A A + Sbjct: 307 IRTYNY-PQGRVTDHRINLTLYKLEFIMDGDMDELVNALAAEHR 349 >gi|260904322|ref|ZP_05912644.1| peptide chain release factor 2 [Brevibacterium linens BL2] Length = 372 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 139/353 (39%), Positives = 211/353 (59%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + D DN ++ + + P W + A+ + H + +++ Sbjct: 12 LRQTYKAILDVSDLDNLRSEVAEMTEQASAPSFWDDPDSAQKISATLSHKQGTLEKLEKF 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 +R+ D +++E++ +E D E +L+++ ++ + +LL+ E D A + V Sbjct: 72 GERIDDAELIIEMSEDEGDEDSKVEAERDLKKLHDQLAELEISTLLNHEYDERSAVVTVR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ DWA ML+RMY RWAE R + + L+ E AGIKSAT+ + P AYG L Sbjct: 132 SGAGGDDATDWAQMLIRMYVRWAENRGYNVQQLDTSYAEGAGIKSATIQVNAPYAYGTLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ + +EI E+D RID YR+SG GGQ Sbjct: 192 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIESTDHVEIDENDLRIDVYRSSGPGGQS 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH PTGVVV Q E+SQ +N+ A +L+++L +L+ ++ Sbjct: 252 VNTTDSAVRITHAPTGVVVSMQNEKSQIQNREAAMRVLQSRLLDLKRKEEAAEKKELAGD 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYV PYQMVKDLRT E +PS+V DGDLD ++A + +K Sbjct: 312 -IKASWGDQMRSYVTHPYQMVKDLRTGYEVNNPSNVFDGDLDGLIEAGIRWRK 363 >gi|57241933|ref|ZP_00369873.1| peptide chain release factor 2 [Campylobacter upsaliensis RM3195] gi|57017125|gb|EAL53906.1| peptide chain release factor 2 [Campylobacter upsaliensis RM3195] Length = 368 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 170/353 (48%), Positives = 233/353 (66%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +++ + + + +LS + + DP+ W N A +L +E+ + N + + Sbjct: 13 LEQKVKNIASIIKPNELRVKLSEIEMQENDPNFWNNAKNAAVLGKEKTKITNLLKAYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L ++A E+D L+ ++ +++ + + LLSGE D+ +A + +H Sbjct: 73 FNALNDANELFDMANSENDDETLKALFEDAPKLEDNITSLEISMLLSGENDNKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA+ML RMY R+ E+ FK E L+ +G+EAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGDEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDLRIDFYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITHIPT +VVQCQ +RSQHKNKA A+ MLR++LYELEL K+E +AN Sbjct: 253 VNKTESAVRITHIPTNIVVQCQNDRSQHKNKATAFKMLRSRLYELELMKQEAVAN--SGE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+E+GWG QIRSYVL PYQ VKD R+N ++ +LDGD+ ++ L K Sbjct: 311 KSEMGWGHQIRSYVLFPYQQVKDTRSNEAFSNAEGILDGDIKKMIEGVLIAMK 363 >gi|256851470|ref|ZP_05556859.1| peptide chain release factor 2 [Lactobacillus jensenii 27-2-CHN] gi|260660891|ref|ZP_05861806.1| peptide chain release factor 2 [Lactobacillus jensenii 115-3-CHN] gi|282933470|ref|ZP_06338846.1| peptide chain release factor 2 [Lactobacillus jensenii 208-1] gi|297206285|ref|ZP_06923680.1| peptide chain release factor RF2 [Lactobacillus jensenii JV-V16] gi|256616532|gb|EEU21720.1| peptide chain release factor 2 [Lactobacillus jensenii 27-2-CHN] gi|260548613|gb|EEX24588.1| peptide chain release factor 2 [Lactobacillus jensenii 115-3-CHN] gi|281302401|gb|EFA94627.1| peptide chain release factor 2 [Lactobacillus jensenii 208-1] gi|297149411|gb|EFH29709.1| peptide chain release factor RF2 [Lactobacillus jensenii JV-V16] Length = 332 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 155/325 (47%), Positives = 210/325 (64%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W N A+ L+ E L ++ D LEL EE D + E Sbjct: 1 MADPDFWNNQESAQKLISETNKLKEKRDHFNDLAQAFSDEETALELLKEEPDDDLQVEVE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +L+++K + LLSG+ D+N+A +E+H GAGGTE+ DWA ML+RMY R++E Sbjct: 61 TDLEKLKDSFHQYELNLLLSGKYDANNALMEIHPGAGGTEAMDWAQMLMRMYQRFSEAHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E + G+EAG+KS ++LIKG NAYG LKGE GVHRLVRISP+D+ RRHTSF+S+ Sbjct: 121 FTFEIDDYEPGDEAGVKSVSILIKGTNAYGLLKGEMGVHRLVRISPFDAAKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DDSIE++I+ +D RID +R+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ Sbjct: 181 EVIPEIDDSIEVDINPADLRIDVFRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK A N LRAKL++LE +K+ + + + +I WG QIRSYV PY MVKD RTN Sbjct: 241 FQNKETAMNALRAKLFQLEEEKKRKEKEKLKGVQQDIAWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + + V+DG LD+ + + L + Sbjct: 301 FETSDVNGVMDGKLDNLIYSFLQWR 325 >gi|317181479|dbj|BAJ59263.1| peptide chain release factor 2 [Helicobacter pylori F57] Length = 381 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 175/352 (49%), Positives = 242/352 (68%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ HL+ + ++ Sbjct: 31 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVHLNRLLETYQKT 90 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L ++ L ELA ++D L + ++ V+ + E +LSGE D+++A + + Sbjct: 91 KNSLDESTELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 150 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 151 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 210 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 211 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 270 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 271 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQNTAKN--EE 328 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 329 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 380 >gi|57238478|ref|YP_179609.1| peptide chain release factor 2 [Campylobacter jejuni RM1221] gi|73621535|sp|Q5HSX6|RF2_CAMJR RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|57167282|gb|AAW36061.1| peptide chain release factor 2 [Campylobacter jejuni RM1221] gi|315058910|gb|ADT73239.1| Peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni S3] Length = 365 Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats. Identities = 167/349 (47%), Positives = 228/349 (65%), Gaps = 2/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + +N RL + P W +V +A ++ +E+ + N + + Sbjct: 13 LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGVIGKEKTKITNLLKNYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L +LA E+D L+ ++ +++ + + LLSGE D +A + +H Sbjct: 73 FNALNDASELFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA++L RMY R+ E+ FK E L+ +GEEAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANT--GE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K+EIGWG QIRSYVL PYQ VKD R+ + ++LDGD+ ++ L Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVL 359 >gi|154502573|ref|ZP_02039633.1| hypothetical protein RUMGNA_00386 [Ruminococcus gnavus ATCC 29149] gi|153796765|gb|EDN79185.1| hypothetical protein RUMGNA_00386 [Ruminococcus gnavus ATCC 29149] Length = 356 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 117/351 (33%), Positives = 190/351 (54%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ + R + + ++P + + + LM+E+ L + E + + Sbjct: 1 MFDKLEDLLIRYEEVMGELQEPGVANDPERFRKLMKEQSDLAPIVEAYNEYKQCKQNIED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 L + EE D + + + L K VE + L D + +E+ AGAGG Sbjct: 61 SLMMLEEESDEEMRELAKEELNESKARVEELEQELKILLLPKDPNDDKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY +AE R+++TE + +++ G K +I G AY +K E GV Sbjct: 121 DEAALFAAEVYRMYLHYAESRRWRTEMISLNENGIGGFKECVFMITGQGAYSRMKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P + +++ I E D RID RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMP-EAEDVDVVIDEKDIRIDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+V+ Q E+SQ +NK +A+ +LR+KLYELEL+K++ + E+ +++IG Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQ--SAEAEARRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L+GDLD+ + + +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDTILNGDLDEVIDSLIAADQ 347 >gi|260460705|ref|ZP_05808955.1| peptide chain release factor 2 [Mesorhizobium opportunistum WSM2075] gi|259033282|gb|EEW34543.1| peptide chain release factor 2 [Mesorhizobium opportunistum WSM2075] Length = 322 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 220/309 (71%), Positives = 263/309 (85%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ L+ I+ +K + L DN+ L+EL EE D ++ E L+ ++ E + +Q E Sbjct: 1 MRERQGLEEGIASVKGLTQALEDNIGLIELGEEEGDEGVIAEAEAALRSMQGEAKARQVE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD+ND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+R+FK E LE+HDGEEAGI Sbjct: 61 TLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERRRFKVEVLEVHDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSF+S+WVYPV+DD+IEI++SE Sbjct: 121 KSATLLIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVIDDTIEIDVSE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD RIDTYR+SG+GGQHVNTTDSAVRITHI TG+ V CQ ERSQHKNKA+AW MLR++LY Sbjct: 181 SDVRIDTYRSSGSGGQHVNTTDSAVRITHIATGIAVACQAERSQHKNKAKAWEMLRSRLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KRE +AN E+SK++IGWG QIRSYVLQPYQ+VKDLRT +E TSPS VLDGDLDD Sbjct: 241 EEELKKREAVANATEASKSDIGWGHQIRSYVLQPYQLVKDLRTGVESTSPSSVLDGDLDD 300 Query: 346 FMKATLAIK 354 FM+A+L+ + Sbjct: 301 FMEASLSQR 309 >gi|255065586|ref|ZP_05317441.1| peptide chain release factor 1 [Neisseria sicca ATCC 29256] gi|255050411|gb|EET45875.1| peptide chain release factor 1 [Neisseria sicca ATCC 29256] Length = 358 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 121/345 (35%), Positives = 178/345 (51%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 RL + + P ++ + L RE L + + Q D E+ Sbjct: 9 LQQLSDRLEEVTSLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQQAQSDLADAEEM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGTESQDW 133 + + ++K++ + + L D + ++EV AG GG E+ + Sbjct: 69 LSDPE-MKDFAAEEIEAAKVKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAALF 127 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A LLRMY+R+AE+ +++ E + ++ E G K I G AY LK E G HR+ R+ Sbjct: 128 AGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQRV 187 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +S R HTS ++ V P D+ +IE++ +D RIDT+RASGAGGQH+N TDSAVRIT Sbjct: 188 PATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRIT 247 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H+PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G Sbjct: 248 HLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSGDRSE 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGDL++ A +A + Sbjct: 306 RIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQ 349 >gi|225020766|ref|ZP_03709958.1| hypothetical protein CORMATOL_00773 [Corynebacterium matruchotii ATCC 33806] gi|224946468|gb|EEG27677.1| hypothetical protein CORMATOL_00773 [Corynebacterium matruchotii ATCC 33806] Length = 368 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 153/353 (43%), Positives = 218/353 (61%), Gaps = 3/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + + + R L K DP LW + A+ + E + + ++ + Sbjct: 12 LDTTLTSIEKVMNPADLSDRARELAAKAADPSLWDDPEHAQQVTSELSQVQVQLKRLQSL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D I+ E L E++ + L ++ +++ + ++LSGE DS +A + + Sbjct: 72 RSRLTDLPIMYE--LAEEEGEGADIADEELADLRADIDALEVTTMLSGEYDSREALINIR 129 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ DWA ML+RMY RWAEK+ K E +I EEAGIKSAT ++ G YG L Sbjct: 130 SGAGGVDAADWAEMLMRMYIRWAEKQGRKVEVYDISYAEEAGIKSATFIVHGEYMYGTLS 189 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQGVHRLVRISP+D+ +RR TSF+ + V PVV+ + I+I +S+ R+D YR+SG GGQ Sbjct: 190 VEQGVHRLVRISPFDNQARRQTSFAEVEVLPVVEITDHIDIPDSELRVDVYRSSGPGGQS 249 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL E + Q+ + + Sbjct: 250 VNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASALRVLQAKLLERKRQEERAELDALGAG 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+R+YVL P+QMVKDLRT E P VLDGDLD F++A + +K Sbjct: 310 -GNASWGNQMRNYVLHPFQMVKDLRTGFEVGDPQKVLDGDLDKFLEAGIRWRK 361 >gi|153952316|ref|YP_001398744.1| peptide chain release factor 2 [Campylobacter jejuni subsp. doylei 269.97] gi|166223625|sp|A7H5G4|RF2_CAMJD RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|152939762|gb|ABS44503.1| peptide chain release factor 2 [Campylobacter jejuni subsp. doylei 269.97] Length = 365 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 170/353 (48%), Positives = 229/353 (64%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + N RL + P W +V +A ++ +E+ + N + + Sbjct: 13 LKNKVGNIASIIKPKNIQTRLKEIEELENSPSFWNDVKQAGIIGKEKTKITNLLKNYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L +LA E+D LQ ++ +++ + + LLSGE D +A + +H Sbjct: 73 FNALNDASELFDLANSENDIETLQALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA++L RMY R+ E+ FK E L+ +GEEAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN E Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANSSE-- 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+ + ++LDGD+ ++ L K Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363 >gi|33595093|ref|NP_882736.1| peptide chain release factor 1 [Bordetella parapertussis 12822] gi|46576758|sp|Q7WCE3|RF1_BORPA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|33565170|emb|CAE35966.1| peptide chain release factor 1 [Bordetella parapertussis] Length = 360 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 122/344 (35%), Positives = 181/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + RL ++ +P ++ + L RER L+ + D E+ Sbjct: 9 LEQLAHRLIEVDALLAEPETAADMDRFRKLSRERAELEPVVEAFNAFLGVEADVATAQEM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D ++ ++ RI+ Q L D +LE+ AG GG ES ++ Sbjct: 69 LSDPDMKAMAEDEIKTGRARIEEMEAALQLLLLPRDPDDGRSLFLEIRAGTGGDESALFS 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE R ++ E + + E G K + I G AYG LK E G HR+ R+ Sbjct: 129 GDLLRMYTRYAETRGWRVEIMSESESELGGYKEVIVRIDGDGAYGRLKFESGAHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D +I I+ SD RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 189 ATEAQGRIHTSACTVAVMPEADAMSDIVINPSDLRIDTFRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQH+NK +A +L A+L + E+++R+ + K+ IG G + Sbjct: 249 VPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKEMRERQ--SKEAAERKSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +++GDLD+ A LA + Sbjct: 307 IRTYNY-PQGRVTDHRINLTLYKLQQIMEGDLDELTGALLAEHQ 349 >gi|148378178|ref|YP_001252719.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC 3502] gi|148287662|emb|CAL81727.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC 3502] Length = 325 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 147/323 (45%), Positives = 215/323 (66%), Gaps = 1/323 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++P+ W ++ EA+ + E ++L + ++ +++ + D + L E+ L E+D + +E Sbjct: 1 MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEM-LSEEDDDMKKEII 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + IK E + + E+LLSGE D N+ + +H+ GGT++QDW +ML RMYTRWAEK Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSEVGGTDAQDWTDMLFRMYTRWAEKEG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F + +++ + E+AGIKS TL I G YG+LK E+G+HRLVRISP+++N +R TSF+SI Sbjct: 120 FAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASI 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + D EIEI D +IDTYRA GAGGQHVN T+SAVRITH+PTG++VQCQ ERSQ Sbjct: 180 EVLPELTDDQEIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK A +L++KL EL+ + +E ++GWG QIRSYV PY +VKD RT Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E ++ V++GD++ F+ L Sbjct: 300 AETSNVDSVMNGDINIFITQYLK 322 >gi|316984833|gb|EFV63790.1| peptide chain release factor 1 [Neisseria meningitidis H44/76] gi|325140851|gb|EGC63361.1| peptide chain release factor 1 [Neisseria meningitidis CU385] gi|325144920|gb|EGC67204.1| peptide chain release factor 1 [Neisseria meningitidis M01-240013] Length = 385 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 120/349 (34%), Positives = 176/349 (50%), Gaps = 8/349 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + RL + P ++ + L RE L + + + D Sbjct: 31 SILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQSDLA 90 Query: 71 ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E+ + + E + + Q L D + ++E+ AG GG E Sbjct: 91 DAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIRAGTGGDE 150 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY+R+AE+ +++ E + ++ E G K I G AY LK E G HR Sbjct: 151 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHR 210 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ V P D+ +IE++ +D RIDT+RASGAGGQH+N TDSA Sbjct: 211 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 270 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G Sbjct: 271 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 328 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGDL++ A +A + Sbjct: 329 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQ 376 >gi|297564871|ref|YP_003683843.1| hypothetical protein Mesil_0394 [Meiothermus silvanus DSM 9946] gi|296849320|gb|ADH62335.1| hypothetical protein Mesil_0394 [Meiothermus silvanus DSM 9946] Length = 375 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 149/352 (42%), Positives = 205/352 (58%), Gaps = 5/352 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L+ L G D RL L K DPHLW N EAK + +E L A+ + + Sbjct: 16 LQHRLDALRGYLDIAGKESRLRELEVKLNDPHLWDNPTEAKAISQEATRLRKAVENYRRL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L L L E+ + E + ++ ++LLS N A + + Sbjct: 76 ESDLQGLLELWPELSAEERAQMQPELDKAGRELEDLYH----QTLLSFPYAENAAIVTIK 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTE+ DWA ML RMYTR+AE+ FK E +++ G EAGI A +++G AYG L Sbjct: 132 PGAGGTEACDWAEMLYRMYTRFAERHGFKVEVVDVEPGAEAGIDLAQFIVRGEYAYGLLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+++ +R TSF+++ V P VD+S+E+ I+ D RID R+ G GGQ Sbjct: 192 AEAGVHRLVRPSPFNAQGKRQTSFAALEVMPEVDESVEVAINPEDLRIDVMRSQGKGGQG 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+ H+PTG++V+CQ RSQ KNK A N+LR+KL+E+E +K++E + Sbjct: 252 VNTTDSAVRVVHLPTGIMVKCQITRSQQKNKELAMNILRSKLFEIEWKKKQEELARLKGE 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSYVL VKD RT + P +VLDGDL++ + A L K Sbjct: 312 SRPNEWGSQIRSYVLDKQ-YVKDHRTGEMRHDPENVLDGDLENLVWAGLEWK 362 >gi|296122601|ref|YP_003630379.1| hypothetical protein Plim_2354 [Planctomyces limnophilus DSM 3776] gi|296014941|gb|ADG68180.1| hypothetical protein Plim_2354 [Planctomyces limnophilus DSM 3776] Length = 372 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 157/357 (43%), Positives = 229/357 (64%), Gaps = 4/357 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ ++ L D+D R++ +N P W + +A+ L+ E ++++ ++ ++E Sbjct: 11 ELTSRILQLRDSLDYDQWQARVAEINEAMSAPDFWDHQEKAQALVTELRNVNGSLKPLQE 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D + +L E E+D E L ++ + + + ++++S D AYL++ Sbjct: 71 LIDGTEELAVLREFLAEDDSSESRDEMVGLLASLQEKFQQVELKAMMSRPEDPCSAYLQI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG GGT++ DWA MLLRMYTRWAE R F+TE +EI + EEAGI++ATL I+G YG L Sbjct: 131 QAGEGGTDASDWAAMLLRMYTRWAEDRGFETELIEISEAEEAGIRNATLAIRGEYVYGLL 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI---DTYRASGA 238 +GE GVHRL+RISP+D RR TSF+++ V P DD+I+I+I+ D +I D +RASGA Sbjct: 191 RGETGVHRLIRISPFDGAGRRQTSFAAVDVIPEPDDTIDIDINWEDPKIIREDIFRASGA 250 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVN T SA+R+TH+PT VVQCQ ERSQHKN++ ML AKL +LE KRE A Sbjct: 251 GGQHVNKTSSAIRLTHLPTNTVVQCQNERSQHKNRSWCRKMLVAKLLQLETVKRENEAAH 310 Query: 299 GESSKTEIGW-GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K++IG+ G IR+YVL P Q VKD RTN++ +P VLDG +D+F++A L Sbjct: 311 KRGQKSKIGFGGETIRNYVLNPEQFVKDTRTNLKVGTPMPVLDGRIDEFLEAYLRWD 367 >gi|332290276|ref|YP_004421128.1| peptide chain release factor 1 [Gallibacterium anatis UMN179] gi|330433172|gb|AEC18231.1| peptide chain release factor 1 [Gallibacterium anatis UMN179] Length = 360 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 117/344 (34%), Positives = 187/344 (54%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R L DP + + + + +E L++ + + D L Sbjct: 9 LETLDERYEELQALLGDPSVINDQEKFRAYSKEYSQLEDVVKCFARWKQLNSDLQEAQIL 68 Query: 76 ALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + +E + + I+ + Q L D + YLE+ AG GG E+ +A Sbjct: 69 LDDPSMKEMAEEEIAHCTQGIEESEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE ++++TE L ++ E+ G K + I G N YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESKRWRTEVLSANESEQGGYKEIIVKISGENVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 189 KTESQGRIHTSACTVAVMPELPESALPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A ++L ++L + E +++ ++ ++ +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLASRLVQAEEERKAAEQ--ADTRRSLLGSGDRSDK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ ++++G +DD ++ + + Sbjct: 307 IRTYNY-PQGRVTDHRINLTLYRLDEIMNGKIDDLIQPIITEYQ 349 >gi|262380518|ref|ZP_06073672.1| peptide chain release factor 2 [Acinetobacter radioresistens SH164] gi|262297964|gb|EEY85879.1| peptide chain release factor 2 [Acinetobacter radioresistens SH164] Length = 310 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 168/307 (54%), Positives = 221/307 (71%), Gaps = 1/307 (0%) Query: 47 RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106 +E+ L+N I+ ++ + +L D +L+LA+E DD S+L + L + + +F Sbjct: 3 KEKGELENVINVLEGLSTQLEDAQAMLDLAVEADDESLLADVQAELSSAEEALAKLEFRR 62 Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S D N Y+E+ AG+GGTE+QDWA+MLLRMY RW E+ FK E +E DG+ AGIK Sbjct: 63 MFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEESDGDVAGIK 122 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ ++G AYGWL+ E GVHRLVR SP+DS +RRHTSFS+++V P VDD+IEI+I+ S Sbjct: 123 SATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFVSPEVDDNIEIDINPS 182 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D R DTYRASGAGGQH+N TDSAVR+TH+PTG+VV CQ +RSQH N+ AW LRAKLYE Sbjct: 183 DVRTDTYRASGAGGQHINKTDSAVRLTHMPTGIVVACQNQRSQHANRDHAWKQLRAKLYE 242 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LE+ KR E A E SK++IGWG QIRSYVL +KDLRT +E ++ VLDGDLD F Sbjct: 243 LEMSKRNEAAQALEDSKSDIGWGSQIRSYVLDD-SRIKDLRTGVENSNTGAVLDGDLDKF 301 Query: 347 MKATLAI 353 ++A+L Sbjct: 302 IEASLKQ 308 >gi|58582496|ref|YP_201512.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84624384|ref|YP_451756.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|166711947|ref|ZP_02243154.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzicola BLS256] gi|188575993|ref|YP_001912922.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae PXO99A] gi|58427090|gb|AAW76127.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84368324|dbj|BAE69482.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188520445|gb|ACD58390.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae PXO99A] Length = 329 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 172/318 (54%), Positives = 224/318 (70%), Gaps = 1/318 (0%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W + A+ L RER L+ + I ++ L D LLELA E D +L + Sbjct: 2 WNDAERAQALGRERSMLEKTVIGIADVLSGLVDAGDLLELAESEQDEDTALAVIADLDKY 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + VE +FE + SG+ D +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE + Sbjct: 62 QTHVEKLEFERMFSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTELM 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E+ GE AGIKSAT+ I+G AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P V Sbjct: 122 EVSGGEVAGIKSATVRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEV 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT VV CQ RSQH+N+ Sbjct: 182 DDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRDN 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A ML AKLYELE+QKR + E++K++IGWG QIR+YVL +KDLRT IE++ Sbjct: 242 AMKMLAAKLYELEVQKRNVERDALEATKSDIGWGSQIRNYVLD-QSRIKDLRTGIERSDT 300 Query: 336 SDVLDGDLDDFMKATLAI 353 VLDGDLD+F++A+L Sbjct: 301 QKVLDGDLDEFVEASLKA 318 >gi|121612135|ref|YP_001001104.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 81-176] gi|167005998|ref|ZP_02271756.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 81-176] gi|166223626|sp|A1W163|RF2_CAMJJ RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|87249819|gb|EAQ72778.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni 81-176] Length = 365 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 168/353 (47%), Positives = 229/353 (64%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + +N RL + P W +V +A ++ +E+ + N + + Sbjct: 13 LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L +LA E+D L+ ++ +++ + + LLSGE D +A + +H Sbjct: 73 FNALNDANELFDLANSENDTETLEALFNDASKLEDTITSLEISMLLSGENDGKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA++L RMY R+ E+ FK E L+ +GEEAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANT--GE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+ + ++LDGD+ ++ L K Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363 >gi|227494927|ref|ZP_03925243.1| peptide chain release factor RF2 [Actinomyces coleocanis DSM 15436] gi|226831379|gb|EEH63762.1| peptide chain release factor RF2 [Actinomyces coleocanis DSM 15436] Length = 372 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 147/358 (41%), Positives = 220/358 (61%), Gaps = 10/358 (2%) Query: 7 LNCLGGLFD-------WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59 + L G + D R++ L+ K P LW N A+ + E H + I Sbjct: 9 IESLRGTLENIIAVTRPDELKARIAELSEKAAVPDLWDNPEAAQAVTSELSHTQAELGRI 68 Query: 60 KEIQDRLCDNLILLELALE--EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117 +++ +R+ D ++E+A E ++ +L+E +L I+ + + ++LLSGE D A Sbjct: 69 EKMVERIDDLETIVEMAEEDLDEKDLLLEEAEADLAGIRQALADLEIKTLLSGEYDERSA 128 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 + + AGAGG ++ D+A MLLRMY RWAE+ + T+ ++ EEAG+KSAT + P A Sbjct: 129 VVTIRAGAGGVDAADFAEMLLRMYLRWAERNGYPTKVMDTSYAEEAGLKSATFEVNAPYA 188 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 YG L E G HRLVRISP+D+ RR TSF+++ V P+++ + IEI ES+ +ID +R+SG Sbjct: 189 YGTLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIETTDHIEIPESELKIDVFRSSG 248 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQ VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L +L ++ + Sbjct: 249 PGGQSVNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLQLRHEEEQAAKK 308 Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVLQPYQMVKDLRT+ E + V DG++DDF+ A + +K Sbjct: 309 ALAGD-VKASWGDQMRSYVLQPYQMVKDLRTSHENGNTGAVFDGEIDDFINAGIRWRK 365 >gi|255528153|ref|ZP_05394980.1| peptide chain release factor 2 [Clostridium carboxidivorans P7] gi|255508166|gb|EET84579.1| peptide chain release factor 2 [Clostridium carboxidivorans P7] Length = 326 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 158/324 (48%), Positives = 225/324 (69%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++P+ W + +A+ + E + L + + KE++ ++ D L +LA+EE+D S ++ Sbjct: 1 MQEPNFWNDTDKAQEITSEERFLKSRLDKYKELETKIQDAEFLTKLAIEENDLSSSKDII 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ I E E + E LLSGE D N+A +++H G GGT++QDW MLLRMYTRWAEK+ Sbjct: 61 REVEEIDNETERFRIEILLSGEYDKNNAIMDIHVGVGGTDAQDWTEMLLRMYTRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++I E+AGIKSATL I G AYG+LK E+G+HRLVRISP+++N +R TSF+SI Sbjct: 121 FKIETVDILPAEDAGIKSATLRIIGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASI 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + ++ +I+I D ++DTYR+SGAGGQHVN T+SA+RITHIPTG+VVQCQ +RSQ Sbjct: 181 EVLPELTNNQDIDIKPDDIKVDTYRSSGAGGQHVNKTESAIRITHIPTGIVVQCQNQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H N+ +A ML+AKL EL+ + +E ++GWG QIRSYV QPY MVKD RT+ Sbjct: 241 HHNREEAMRMLKAKLAELKERAHKEKIEDLTGELKDMGWGSQIRSYVFQPYTMVKDHRTS 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 +E + + V+DGD+D F+ L Sbjct: 301 VECGNINAVMDGDIDQFINEYLKQ 324 >gi|33591871|ref|NP_879515.1| peptide chain release factor 1 [Bordetella pertussis Tohama I] gi|33599373|ref|NP_886933.1| peptide chain release factor 1 [Bordetella bronchiseptica RB50] gi|46576754|sp|Q7W023|RF1_BORPE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|46576762|sp|Q7WQE9|RF1_BORBR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|33566969|emb|CAE30882.1| peptide chain release factor 1 [Bordetella bronchiseptica RB50] gi|33571515|emb|CAE40989.1| peptide chain release factor 1 [Bordetella pertussis Tohama I] gi|332381288|gb|AEE66135.1| peptide chain release factor 1 [Bordetella pertussis CS] Length = 360 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 122/344 (35%), Positives = 180/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + RL ++ +P ++ + L RER L+ + D E+ Sbjct: 9 LEQLAHRLIEVDALLAEPETAADMDRFRKLSRERAELEPVVEAFNAFLGVEADVATAQEM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D ++ ++ RI+ Q L D +LE+ AG GG ES ++ Sbjct: 69 LSDPDMKAMAEDEIKTGRARIEEMEAALQLLLLPRDPDDGRSLFLEIRAGTGGDESALFS 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE R ++ E + + E G K I G AYG LK E G HR+ R+ Sbjct: 129 GDLLRMYTRYAETRGWRVEIMSESESELGGYKEVIARIDGDGAYGRLKFESGAHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D +I I+ SD RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 189 ATEAQGRIHTSACTVAVMPEADAMSDIVINPSDLRIDTFRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQH+NK +A +L A+L + E+++R+ + K+ IG G + Sbjct: 249 VPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKEMRERQ--SKEAAERKSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +++GDLD+ A LA + Sbjct: 307 IRTYNY-PQGRVTDHRINLTLYKLQQIMEGDLDELTGALLAEHQ 349 >gi|262274708|ref|ZP_06052519.1| peptide chain release factor 1 [Grimontia hollisae CIP 101886] gi|262221271|gb|EEY72585.1| peptide chain release factor 1 [Grimontia hollisae CIP 101886] Length = 362 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 116/342 (33%), Positives = 179/342 (52%), Gaps = 9/342 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + DP + + + L +E L+ I + D E+ Sbjct: 9 LEALSERYEEVQHLLGDPSVISDQDRFRSLSKEYSQLEEVIKCFSAYKQAESDLEAAQEM 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 A E+D + + I+ + Q L D + +LE+ AGAGG E+ Sbjct: 69 ANEDDPEMREMAQEEVKAAKEDIERLTDELQVLLLPKDPNDERNCFLEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE + ++ E + + GE G K + G AYG +K E G HR+ R Sbjct: 129 FAGDLFRMYSRFAESKGWRVEVINANHGEHGGYKEMIAKVNGDGAYGVMKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ + P + ++ EI+ +D +IDT+R+SGAGGQHVNTTDSA+RI Sbjct: 189 VPATESQGRVHTSACTVAILPEIPEAEIPEINPADLKIDTFRSSGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG VV+CQ ERSQHKNKA+A +L A+L + E +KR + + +G G Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARLIKAEEEKRAAEQ--ASTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R N+ +V++GDLD ++ + Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTVYRLDEVMEGDLDSLIQPII 347 >gi|226947396|ref|YP_002802487.1| peptide chain release factor 2 [Clostridium botulinum A2 str. Kyoto] gi|226842678|gb|ACO85344.1| peptide chain release factor 2 [Clostridium botulinum A2 str. Kyoto] Length = 325 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 149/323 (46%), Positives = 217/323 (67%), Gaps = 1/323 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++P+ W ++ EA+ + E ++L + ++ +++ + D + L E+ L E+D + +E Sbjct: 1 MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEM-LSEEDDDMKKEII 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + IK E + + E+LLSGE D N+ + +H+G GGT++QDW +ML RMYTRWAEK Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F + +++ + E+AGIKS TL I G YG+LKGE+G+HRLVRISP+++N +R TSF+SI Sbjct: 120 FTIKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASI 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + P + D EIEI D +IDTYRA GAGGQHVN T+SAVRITHIPTG++VQCQ ERSQ Sbjct: 180 EILPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK A +L++KL EL+ + +E ++GWG QIRSYV PY +VKD RT Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E ++ V++GD++ F+ L Sbjct: 300 AETSNVDSVMNGDINIFITQYLK 322 >gi|310829178|ref|YP_003961535.1| peptide chain release factor 1 [Eubacterium limosum KIST612] gi|308740912|gb|ADO38572.1| peptide chain release factor 1 [Eubacterium limosum KIST612] Length = 357 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 122/348 (35%), Positives = 193/348 (55%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL---CDNLIL 72 D + LN K DP + + + + LM+E H++ I+ E + L ++ + Sbjct: 5 LDFLSSKYQELNEKIADPDIIADQAQWQKLMKEHAHIEPIINRYNEYKKTLEGIEESKEM 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGAGGTES 130 L + D + + + + + + L D + +E+ AGAGG+E+ Sbjct: 65 LSDKSIDKDFEEMCKAELDELTERKAALEDELKVLLLPKDPNDDKNVIVEIRAGAGGSEA 124 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RM+TR+AE++ +K+E + + + GIK T I+G AY LK E GVHR+ Sbjct: 125 ALFAGDLFRMFTRYAERQGWKSEIMNSNIPDIGGIKEITFSIEGRGAYSRLKYESGVHRV 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 RI +S R HTS +++ V P + +EI+I+ +D RID YR+SG GGQ VNTTDSAV Sbjct: 185 QRIPSTESGGRIHTSTATVAVLP-EAEDVEIDINPNDLRIDVYRSSGNGGQCVNTTDSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH PTG+VV CQ E+SQ KNK +A +L+A+L+E+E+QK++ I E+ K+++G G Sbjct: 244 RITHEPTGMVVTCQDEKSQLKNKEKAMKVLKARLFEIEMQKQQSE--IAENRKSQVGTGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + LDG++D+ + A + + Sbjct: 302 RSERIRTYNF-PQGRVTDHRIGMTVYQLEAFLDGEIDEMVDALITSDQ 348 >gi|217034219|ref|ZP_03439638.1| hypothetical protein HP9810_886g56 [Helicobacter pylori 98-10] gi|216943387|gb|EEC22846.1| hypothetical protein HP9810_886g56 [Helicobacter pylori 98-10] Length = 381 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 173/352 (49%), Positives = 241/352 (68%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 31 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 90 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L ++ L ELA ++D L + ++ V+ + + +LSGE D+++A + + Sbjct: 91 KNSLDESTELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIKIMLSGENDASNAIITIQ 150 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 151 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 210 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 211 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 270 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 271 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 328 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 329 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 380 >gi|325280722|ref|YP_004253264.1| Peptide chain release factor 2 [Odoribacter splanchnicus DSM 20712] gi|324312531|gb|ADY33084.1| Peptide chain release factor 2 [Odoribacter splanchnicus DSM 20712] Length = 370 Score = 243 bits (621), Expect = 3e-62, Method: Composition-based stats. Identities = 138/358 (38%), Positives = 211/358 (58%), Gaps = 11/358 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L D D L + +T+ P W + +A+ +M++ + L I + + Sbjct: 10 VEERSGALRRYLDIDRKKIELEEVEMRTQAPDFWNDAKQAEKVMKQVRELKGWIEGCEAV 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D +L + A E + +T VE + +++L GEAD L+++ Sbjct: 70 SRSVDDLNVLFDFAKEGEATEEEVDTHYAET--LQLVEELELKNMLRGEADQMSCILKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDWA+ML+RMY RWAE +K I +G+EAGIK+ TL ++G AYG+LK Sbjct: 128 SGAGGTESQDWASMLMRMYMRWAEANNYKLTVSNIQEGDEAGIKTVTLQLEGDFAYGYLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVR+SP+++ +R TSF+S++V P+VDDSIEI I+ +D DT+R+ GAGGQ+ Sbjct: 188 GENGVHRLVRVSPFNAQGKRMTSFASVFVTPLVDDSIEIAINAADISWDTFRSGGAGGQN 247 Query: 243 VNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 VN ++ VR+ + ++++ + RSQ N+ A +LR+ LY++ELQ+R Sbjct: 248 VNKVETGVRLRYNYKDPDTGETREILIENTETRSQLDNRENAMRLLRSMLYDMELQRRMA 307 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 ES+K +I WG QIRSYV + VKD RTN + + V+DG +D F+KA L Sbjct: 308 EQQKIESNKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVGGVMDGKIDGFIKAYLM 364 >gi|258541170|ref|YP_003186603.1| translation peptide chain release factor 2 (RF-2) [Acetobacter pasteurianus IFO 3283-01] gi|256632248|dbj|BAH98223.1| translation peptide chain release factor 2 (RF-2) [Acetobacter pasteurianus IFO 3283-01] gi|256635305|dbj|BAI01274.1| translation peptide chain release factor 2 (RF-2) [Acetobacter pasteurianus IFO 3283-03] gi|256638360|dbj|BAI04322.1| translation peptide chain release factor 2 (RF-2) [Acetobacter pasteurianus IFO 3283-07] gi|256641414|dbj|BAI07369.1| translation peptide chain release factor 2 (RF-2) [Acetobacter pasteurianus IFO 3283-22] gi|256644469|dbj|BAI10417.1| translation peptide chain release factor 2 (RF-2) [Acetobacter pasteurianus IFO 3283-26] gi|256647524|dbj|BAI13465.1| translation peptide chain release factor 2 (RF-2) [Acetobacter pasteurianus IFO 3283-32] gi|256650577|dbj|BAI16511.1| translation peptide chain release factor 2 (RF-2) [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653568|dbj|BAI19495.1| translation peptide chain release factor 2 (RF-2) [Acetobacter pasteurianus IFO 3283-12] Length = 323 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 193/309 (62%), Positives = 241/309 (77%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRER L N I ++ ++ + D L+ELA E D ++ E L+ + E + ++ E Sbjct: 2 MRERTLLANQIEGVEALETNVRDTSELIELAEAEGDADLVAEGMATLRDLAEEAKRRETE 61 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEADSND YLEV+AGAGGTE+QDW MLLRMYTRWAE +K +E +GE+AG+ Sbjct: 62 SLLSGEADSNDCYLEVNAGAGGTEAQDWTEMLLRMYTRWAEAHGYKVTLMESSEGEQAGL 121 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+L+ GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPV+DDSIEIEI++ Sbjct: 122 KSATILVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVIDDSIEIEIND 181 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D ++DT+RASGAGGQHVN TDSA+RITH+PTG+VV CQ +RSQH+N+A A MLRA+LY Sbjct: 182 ADLKVDTFRASGAGGQHVNKTDSAIRITHMPTGIVVACQTDRSQHRNRATAMQMLRARLY 241 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E ELQKRE A E++KT+IGWG QIRSYVL PYQMVKDLRT +E +P VLDGDLD Sbjct: 242 EAELQKREAEAAAAEAAKTDIGWGHQIRSYVLAPYQMVKDLRTGVETGNPDAVLDGDLDA 301 Query: 346 FMKATLAIK 354 FM A LA++ Sbjct: 302 FMAAALAMR 310 >gi|302671177|ref|YP_003831137.1| peptide chain release factor 1 PrfA [Butyrivibrio proteoclasticus B316] gi|302395650|gb|ADL34555.1| peptide chain release factor 1 PrfA [Butyrivibrio proteoclasticus B316] Length = 357 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 119/351 (33%), Positives = 195/351 (55%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ +++ + + DP + + + LM+E+++L+ + E + Sbjct: 1 MFDKIEDILRKFEDITMELNDPSVIADQERFRKLMKEQKNLEPLVECYNEYKKCKETIDE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 L + EE D + + D LQ K ++ + L D + +E+ AG GG Sbjct: 61 SLAMLDEESDPEMKEMLKDELQTAKDKIPELEDKLKILLLPKDPNDDKNVIVEIRAGVGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + R+YTR+AE++ ++ E + + D GIK+ + +IKG AY LK E GV Sbjct: 121 DEAALFAADMYRVYTRYAERQNWRVETMSVEDIGIGGIKTVSFMIKGNGAYSRLKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +S R HTS ++ + P + +E+EI +DC+ D +RASG GGQ VNTTD Sbjct: 181 HRVQRIPATESGGRIHTSAITVAIMP-EVEDVEVEIDMNDCKFDVFRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+V+ CQ E+SQ +NKA+A +LRAKLYELE +K+ N E ++++G Sbjct: 240 SAVRLTHFPTGIVISCQDEKSQQQNKAKALRVLRAKLYELEQEKK--HNNEAELRRSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y V D R + ++DGD+D+ + + +A + Sbjct: 298 SGDRSEKIRTYNFH-QGRVTDHRIGLTLYKIDQIMDGDIDEIIDSLIAADQ 347 >gi|269792424|ref|YP_003317328.1| peptide chain release factor 2 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100059|gb|ACZ19046.1| bacterial peptide chain release factor 2 (bRF- 2) [Thermanaerovibrio acidaminovorans DSM 6589] Length = 374 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 163/353 (46%), Positives = 218/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ L D + +++ L + W+ ++ + RE L + Sbjct: 13 LRSRMCELRDSLDLEGLDRKIGELMERVSSDGFWE-REDSTEVARELSQLQQRRESFSAL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + D L EL +D + +E D ++ +E Q +LL E D +DA + +H Sbjct: 72 EREMEDLETLAELLQAGEDEDLSREFYDRAAEMERRLERTQVLTLLDEEYDRSDAIVGIH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG +SQDWA ML RMY RWAE+ FK L+ +EAGIKS T + G AYG+LK Sbjct: 132 AGAGGLDSQDWAEMLYRMYVRWAERNGFKVRVLDELPDQEAGIKSVTFQVSGEYAYGYLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE+GVHRLVRISP+D+ RRHTSF+S+ V PV+ D +EIEI D ++DT+RASGAGGQ+ Sbjct: 192 GERGVHRLVRISPFDAAKRRHTSFASVEVMPVLPDDVEIEIRPEDIKMDTFRASGAGGQY 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSAVRITHIPTG+VV CQ ERSQH N+A A ML++KL+E +L++R+E + Sbjct: 252 VNMTDSAVRITHIPTGIVVSCQVERSQHMNRATALQMLKSKLFERQLRERQEQLEAIQGE 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K I WG QIRSY LQP+Q+VKD R+ E + VLDGDLDD M A L K Sbjct: 312 KRAISWGSQIRSYTLQPFQLVKDHRSGCEIGNVQAVLDGDLDDLMMAYLKFYK 364 >gi|168177506|ref|ZP_02612170.1| peptide chain release factor 2 [Clostridium botulinum NCTC 2916] gi|182671219|gb|EDT83193.1| peptide chain release factor 2 [Clostridium botulinum NCTC 2916] Length = 325 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 148/323 (45%), Positives = 216/323 (66%), Gaps = 1/323 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++P+ W ++ EA+ + E ++L + ++ +++ + D + L E+ L E+D + +E Sbjct: 1 MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEM-LSEEDDDMKKEII 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + IK E + + E+LLSGE D N+ + +H+G GGT++QDW +ML RMYTRWAEK Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F + +++ + E+AGIKS TL I G YG+LK E+G+HRLVRISP+++N +R TSF+SI Sbjct: 120 FAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASI 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + D EIEI D +IDTYRA GAGGQHVN T+SAVRITH+PTG++VQCQ ERSQ Sbjct: 180 EVLPELTDDQEIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK A +L++KL EL+ + +E ++GWG QIRSYV PY +VKD RT Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKERIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E ++ V++GD++ F+ L Sbjct: 300 AETSNVDSVMNGDINMFITQYLK 322 >gi|134104518|pdb|2IHR|1 Chain 1, Rf2 Of Thermus Thermophilus Length = 365 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 155/353 (43%), Positives = 212/353 (60%), Gaps = 5/353 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+++L LGG+FD RL L + EDP LW + A+ + +E L + + Sbjct: 5 RLAQRLEGLGGIFDIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRS 64 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L L L+E E+ + L+ +++ ++LL+ +A L + Sbjct: 65 LESDLQGLLELMEELPAEEREA----LKPELEEAAKKLDELYHQTLLNFPHAEKNAILTI 120 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 GAGGTE+ DWA MLLRMYTR+AE++ F+ E +++ G EAGI A +L+KG NAYG L Sbjct: 121 QPGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLL 180 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVR SP+D++ RRHTSF+ + V P VD+ +E+ + + RID RASG GGQ Sbjct: 181 SPEAGVHRLVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQ 240 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+ H+PTG+ V CQ RSQ KNK A +L+A+LYELE +KREE Sbjct: 241 GVNTTDSAVRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRG 300 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 I WG QIRSYVL VKD RT + + P +VLDGDL D + A L K Sbjct: 301 EVRPIEWGSQIRSYVLDK-NYVKDHRTGLMRHDPENVLDGDLMDLIWAGLEWK 352 >gi|325578168|ref|ZP_08148303.1| peptide chain release factor RF1 [Haemophilus parainfluenzae ATCC 33392] gi|325159904|gb|EGC72033.1| peptide chain release factor RF1 [Haemophilus parainfluenzae ATCC 33392] Length = 360 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 109/344 (31%), Positives = 183/344 (53%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R L D + + + + +E L++ + + + Sbjct: 9 LESLKERYEELEALLGDASVISDQDKFRAYSKEYSQLEDVVKCFNRWNQLNSNIAEAELM 68 Query: 76 ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + + + + I+ + Q L D + YLE+ AG GG E+ +A Sbjct: 69 LDDPEMKEMAEMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE ++++ E L ++ E+ G K + + G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGDGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++ ++ + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQ--ADTRRNLLGSGDRSDK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +V++G +D+ ++ + + Sbjct: 307 IRTYNY-PQGRVTDHRINLTLYRLDEVMNGKIDELIQPIITEYQ 349 >gi|301156075|emb|CBW15546.1| peptide chain release factor RF-1 [Haemophilus parainfluenzae T3T1] Length = 360 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 109/344 (31%), Positives = 183/344 (53%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R L D + + + + +E L++ + + + Sbjct: 9 LESLKERYEELEALLGDASVISDQDKFRAYSKEYSQLEDVVKCFNRWNQLNSNIAEAELM 68 Query: 76 ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + + + + I+ + Q L D + YLE+ AG GG E+ +A Sbjct: 69 LDDPEMKEMAEMEIEESKVEIEDVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE ++++ E L ++ E+ G K + + G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGDGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++ ++ + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQ--ADTRRNLLGSGDRSDK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +V++G +D+ ++ + + Sbjct: 307 IRTYNY-PQGRVTDHRINLTLYRLDEVMNGKIDELIQPIITEYQ 349 >gi|315586172|gb|ADU40553.1| peptide chain release factor RF2 [Helicobacter pylori 35A] Length = 385 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 174/352 (49%), Positives = 241/352 (68%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 35 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 94 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L ++ L ELA ++D L + ++ V+ + E +LSGE D+++A + + Sbjct: 95 KNSLDESAELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 154 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 155 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 214 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 215 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 274 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 275 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 332 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 333 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 384 >gi|293392123|ref|ZP_06636457.1| peptide chain release factor 1 [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952657|gb|EFE02776.1| peptide chain release factor 1 [Aggregatibacter actinomycetemcomitans D7S-1] Length = 360 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 116/344 (33%), Positives = 181/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ +R L D + + + + +E L++ + + L Sbjct: 9 LDSLKERYEELEALLGDAAVISDQDKFRAYSKEYAQLEDVVKSFNRWNQLNSNLEEAQLL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q + + +VE Q L D + YLE+ AG GG E+ +A Sbjct: 69 LDDPEMKEMAQMEIEESKAELEQVEQYLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE +++ E L ++ E+ G K L+ G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAETKRWHVEVLSENESEQGGFKEIIALVSGDGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ +D RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A ++L ++L + E +K + ++ + +G G + Sbjct: 249 IPTGMVVECQDERSQHKNKAKALSVLASRLVQQEQEKLAQEQ--ADTRRNLLGSGDRSDK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +V++G +DD ++ + + Sbjct: 307 IRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDDLIQPIITEYQ 349 >gi|83644569|ref|YP_433004.1| peptide chain release factor 1 [Hahella chejuensis KCTC 2396] gi|119361548|sp|Q2SL95|RF1_HAHCH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|83632612|gb|ABC28579.1| peptide chain release factor 1 [Hahella chejuensis KCTC 2396] Length = 360 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 116/344 (33%), Positives = 183/344 (53%), Gaps = 9/344 (2%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI-- 71 D R + DP + + K L +E L+ + +E Q+ L Sbjct: 7 LKLDLLKDRYEEVGALLSDPDIISVQEKFKELSKEYAELEPVVQCYQEYQNALNAIEESK 66 Query: 72 -LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LL + + +E + + + + Q L D ++ +LE+ AG GG E+ Sbjct: 67 LLLNDSDADMREMAKEELAAAEESSEQLEKDLQILLLPRDPRDGSNVFLEIRAGTGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY+R+AE +K+K E + GE G K + G N + LK E G HR+ Sbjct: 127 AIFAGDLFRMYSRYAELKKWKVEIVSESPGEHGGYKEVISRVAGDNVFNLLKFESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS ++ + P V++ +++I+ +D R+DTYRASGAGGQHVN TDSA+ Sbjct: 187 QRVPETESQGRIHTSACTVAILPEVEEVGDVDINPADLRVDTYRASGAGGQHVNKTDSAI 246 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+P+G+VV+CQ ERSQHKN+A+A ++L+AKL +K+ + ++ K+ +G G Sbjct: 247 RITHLPSGIVVECQDERSQHKNRAKAMSLLKAKLLSSAQEKQAKEQ--AQTRKSLVGSGD 304 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P + D R N+ +V+ GDLD ++ L Sbjct: 305 RSERIRTYNY-PQGRITDHRINLTLYKLEEVVQGDLDPVIQPLL 347 >gi|110639213|ref|YP_679422.1| peptide chain release factor 2 [Cytophaga hutchinsonii ATCC 33406] gi|110281894|gb|ABG60080.1| bacterial peptide chain release factor 2 (bRF-2) [Cytophaga hutchinsonii ATCC 33406] Length = 358 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 142/353 (40%), Positives = 216/353 (61%), Gaps = 2/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + L G +D+ + + + P W + EA+ ++R ++ Sbjct: 8 ELKASILALRGYLGYDSKMDEIKAEQELSLAPTFWDDSKEAEKILRSIKNKKVWTDPYDA 67 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + +L D L E D + +E +F+ +LS E D A LE+ Sbjct: 68 LLTKLGDLEALNEFYQAGDIDDKE--MDAEFAAVAKVLEELEFKKMLSAEEDQLSAVLEI 125 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 + GAGGTES DWA+ML+RMY W EK + + GE AGIK A+L I+G AYG L Sbjct: 126 NPGAGGTESNDWADMLMRMYIMWGEKNGYTVREIVNQPGEVAGIKFASLGIEGQFAYGNL 185 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVR SP++++ +R TSF+S++VYP VD++I IEI+ D DT+RA GAGGQ Sbjct: 186 KSEIGVHRLVRDSPFNADGKRQTSFASVYVYPEVDETINIEINMGDVEWDTFRAGGAGGQ 245 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN ++AVR+ H P+G++++CQQERSQ +NK +A +L+++LY++E+ KR E E Sbjct: 246 NVNKVETAVRLKHKPSGLIIECQQERSQIQNKDKALKLLKSRLYQIEIDKRNEAKAAVEG 305 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +K +I +G QIR+YVL PY+++KD+RT +E+T +VL GDL++++KA L +K Sbjct: 306 TKKKIDFGSQIRNYVLFPYKLIKDVRTGVERTDVDNVLAGDLNEYIKAYLLMK 358 >gi|86152591|ref|ZP_01070796.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843476|gb|EAQ60686.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni HB93-13] Length = 365 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 168/353 (47%), Positives = 229/353 (64%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + +N RL + P W +V +A ++ +E+ + N + + Sbjct: 13 LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D L +LA E+D L+ ++ +++ + + LLSGE D +A + +H Sbjct: 73 FNALNDASGLFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA++L RMY R+ E+ FK E L+ +GEEAG+K + L+KG NAYG+LK Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP+DS RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANT--GE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+ + ++LDGD+ ++ L K Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363 >gi|322804442|emb|CBZ01992.1| peptide chain release factor 2 [Clostridium botulinum H04402 065] Length = 325 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 149/323 (46%), Positives = 217/323 (67%), Gaps = 1/323 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++P+ W ++ EA+ + E ++L + ++ +++ + D + L E+ L E+D + +E Sbjct: 1 MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEM-LSEEDDDMKKEII 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + IK E + + E+LLSGE D N+A + +H+G GGT++QDW +ML RMYTRWAEK Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNAIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F + +++ + E+AGIKS TL I G YG+LK E+G+HRLVRISP+++N +R TSF+SI Sbjct: 120 FAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASI 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + D EIEI D +IDTYRA GAGGQHVN T+SAVRITH+PTG++VQCQ ERSQ Sbjct: 180 EVLPELTDDQEIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK A +L++KL EL+ + +E ++GWG QIRSYV PY +VKD RT Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKERIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E ++ V++GD++ F+ L Sbjct: 300 AETSNVDSVMNGDINMFITQYLK 322 >gi|257054828|ref|YP_003132660.1| peptide chain release factor 2 [Saccharomonospora viridis DSM 43017] gi|256584700|gb|ACU95833.1| bacterial peptide chain release factor 2 (bRF-2) [Saccharomonospora viridis DSM 43017] Length = 368 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 160/353 (45%), Positives = 223/353 (63%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L + + D D + ++ L + P LW + A+ + + H ++ + E+ Sbjct: 12 LGGKLAQVEAVMDLDALRREVAELEEEAARPDLWNDPEVAQRVTSQLSHKQASLRKVSEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L ELA E D + L E L ++ +V + +LLSGE D +A + + Sbjct: 72 RQRVDDLGVLHELAEAEGDKASLAEAEAELAQLTKDVNALEVRTLLSGEYDERNAVVTIR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ DWA MLLRMY RWAE+ + TE +I EEAGI+SAT I GP YG L Sbjct: 132 SEAGGVDAADWAEMLLRMYLRWAERHNYPTEIYDISYAEEAGIRSATFKISGPYLYGTLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ +RR TSF+ + V P V++ +EI E D R+D YR+SG GGQ Sbjct: 192 VEQGTHRLVRISPFDNQNRRQTSFAHVEVLPEVEEIDHVEIPEKDIRVDVYRSSGPGGQS 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV CQ E+SQ +NKA A +L+AKL L+ +K EE A + Sbjct: 252 VNTTDSAVRITHLPTGIVVSCQNEKSQLQNKASAMKVLQAKL--LQRKKEEERAELDALR 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQ+VKDLRT+ E +PS VLDG+LD F++A + +K Sbjct: 310 DSGSSWGNQMRSYVLHPYQLVKDLRTDYEVGNPSAVLDGELDGFLEAGIRWRK 362 >gi|119715500|ref|YP_922465.1| peptide chain release factor 2 [Nocardioides sp. JS614] gi|119536161|gb|ABL80778.1| bacterial peptide chain release factor 2 (bRF-2) [Nocardioides sp. JS614] Length = 375 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 151/354 (42%), Positives = 214/354 (60%), Gaps = 1/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++ + + D + ++ L + P LW + A + L + Sbjct: 15 QLQATMHTIEQVLDLETMRAEIADLGEQVAAPDLWDDQDNATRVTGRLSALQGELDRFTA 74 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +Q + D I++E+A EE D L E L R+K VE + +LLSGE D+ +A + + Sbjct: 75 LQGSVDDLAIMVEMAQEEGDADALAEAEAELGRLKRSVEALEVRTLLSGEYDAREAIVTI 134 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A ML+RMYTRWAE+ K+ E ++ EEAGIKSA I P AYG L Sbjct: 135 RSGAGGVDAADFAEMLMRMYTRWAEQHKYPVEVFDVSYAEEAGIKSAEFAIHAPYAYGTL 194 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V PV++ + EIEI E+D R D +R+ G GGQ Sbjct: 195 SVEAGTHRLVRISPFDNQGRRQTSFAAVEVVPVLEQTDEIEIDENDIRTDVFRSGGPGGQ 254 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A +L+AKL + + + + Sbjct: 255 SVNTTDSAVRLTHIPTGIVVSCQNEKSQLQNKASAMVVLKAKLLAKKKAEEAALKKDLKG 314 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+R+YVL PYQMVKDLRT E +P V DGD+DDF++A + ++ Sbjct: 315 D-VAAAWGDQMRNYVLNPYQMVKDLRTGYEVGNPQSVFDGDVDDFIEAGIRWRR 367 >gi|227486641|ref|ZP_03916957.1| peptide chain release factor RF2 [Anaerococcus lactolyticus ATCC 51172] gi|227235353|gb|EEI85368.1| peptide chain release factor RF2 [Anaerococcus lactolyticus ATCC 51172] Length = 329 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 162/326 (49%), Positives = 218/326 (66%), Gaps = 2/326 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 P+ W N +A+ +M + + +I+D + DN L++L D+ + Sbjct: 2 SPNFWDNSDKAQTVMADLSDKKEDLKAYTDIEDAIKDNKDLIDLVELSDEDESKTLEEVD 61 Query: 92 LQ--RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +IK + + ++ L+GE D N+AYL ++AGAGG E+ DWA+ML RMYTR+ EKR Sbjct: 62 SNLKQIKKSLASLKLKTQLNGEYDKNNAYLSINAGAGGLEATDWADMLFRMYTRYCEKRG 121 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++++ E GIKS TL +KGP AYG+LKGE+GVHRLVRISP+DS SRRHTSFSS+ Sbjct: 122 FKVEVKDLNNEEAGGIKSVTLHVKGPYAYGYLKGEKGVHRLVRISPFDSQSRRHTSFSSV 181 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V+P +D+ IEI SD RIDTYRASGAGGQHVN TDSAVRITHIPTGVV Q ERSQ Sbjct: 182 DVFPELDEDTSIEIDPSDLRIDTYRASGAGGQHVNKTDSAVRITHIPTGVVATSQAERSQ 241 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A N+L +KL +++ ++++E + S ++I WG QIRSYV QPY MVKD RTN Sbjct: 242 MQNRETAMNLLISKLIQIKEEEKKEKIEDIQGSYSQIAWGSQIRSYVFQPYTMVKDHRTN 301 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355 E + V+DGD+ F+ A LA + Sbjct: 302 YEMGNVEAVMDGDIQGFIDAYLAQNQ 327 >gi|118590063|ref|ZP_01547467.1| peptide chain release factor 2 [Stappia aggregata IAM 12614] gi|118437560|gb|EAV44197.1| peptide chain release factor 2 [Stappia aggregata IAM 12614] Length = 322 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 225/309 (72%), Positives = 262/309 (84%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD++IS IK ++ L DN+ L+EL EDD S++ + + L+ +K +V Q Sbjct: 1 MRERQQLDDSISGIKSLEQDLSDNIELIELGEMEDDKSVVADAEEALRGLKGKVNQLQLN 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD+ND YLE+++GAGGTESQDWA+MLLRMY RWAEK FK E LE HDGEEAGI Sbjct: 61 SLLSGEADANDTYLEINSGAGGTESQDWASMLLRMYRRWAEKHGFKVEVLEYHDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSS WVYPV+DDSI+I+I+E Sbjct: 121 KSATLLIKGENAYGWLKTESGVHRLVRISPYDSNARRHTSFSSAWVYPVIDDSIDIDINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYRASGAGGQHVNTTDSAVRITH PTG+VVQCQ ERSQHKN+A AW+ML+A+LY Sbjct: 181 SDCRIDTYRASGAGGQHVNTTDSAVRITHQPTGIVVQCQSERSQHKNRATAWSMLKARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE A+ +SKT+IGWG QIRSYVLQPYQ+VKDLRT +E TSP DVLDGDLD+ Sbjct: 241 EAELKKREEAASAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTSPGDVLDGDLDE 300 Query: 346 FMKATLAIK 354 FM+A LA + Sbjct: 301 FMEAALAQR 309 >gi|32266159|ref|NP_860191.1| peptide chain release factor 2 [Helicobacter hepaticus ATCC 51449] gi|81666133|sp|Q7VIE6|RF2_HELHP RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|32262209|gb|AAP77257.1| peptide chain release factor 2 [Helicobacter hepaticus ATCC 51449] Length = 366 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 170/349 (48%), Positives = 232/349 (66%), Gaps = 3/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + ++L + +D H W + A + ++++ + + Sbjct: 13 LHNKCENIAKILNPTSLQKQLKDIENLEQDEHFWNDSKRAAEVAKQKRKCERMLQTYTNT 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + D L L E+A+ E+D L+ + + ++ + E +LSGE D ++A + + Sbjct: 73 KQEIDDALELYEIAMSEEDSRTLELLFEQAPSLLSHIQKVEIEVMLSGENDGSNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RW+E+R FK E L+ DGEEAGIK +IKG NAYG+ K Sbjct: 133 PGAGGTESQDWASILYRMYLRWSERRGFKVELLDYQDGEEAGIKGVAFIIKGENAYGYAK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ V P +DD I IEI + D RIDTYRASGAGGQH Sbjct: 193 SENGVHRLVRISPFDANAKRHTSFASVQVSPELDDDINIEIEDKDIRIDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SA+RITH PTG+VVQCQ +RSQHKNKA A ML++KLYELELQK +E Sbjct: 253 VNKTESAIRITHFPTGIVVQCQNDRSQHKNKATAMKMLKSKLYELELQKNQE---GASQE 309 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K+EIGWG QIRSYVL PYQ VKDLRT + S VLDGD+D+ +++ L Sbjct: 310 KSEIGWGHQIRSYVLAPYQQVKDLRTQFATSDTSGVLDGDIDEIIESVL 358 >gi|317008842|gb|ADU79422.1| peptide chain release factor 2 [Helicobacter pylori India7] Length = 363 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 174/352 (49%), Positives = 243/352 (69%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ + +E+ L+ + ++ Sbjct: 13 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDINKEKVRLNRLLETYQKT 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L +++ L ELA ++D L + ++ V+ + E +LSGE D+++A + + Sbjct: 73 KNALDESVELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362 >gi|74318511|ref|YP_316251.1| peptide chain release factor 1 [Thiobacillus denitrificans ATCC 25259] gi|119361634|sp|Q3SG10|RF1_THIDA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|74058006|gb|AAZ98446.1| peptide chain release factor 1 [Thiobacillus denitrificans ATCC 25259] Length = 360 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 122/344 (35%), Positives = 183/344 (53%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 A +RL L+ P + ++ + L RE L + ++ + D E+ Sbjct: 9 LARADERLEELDALLAQPEVAADMDSYRKLTREHAELSPVVGLYRQYKQVEADQKTAQEM 68 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + + + Q L D + +LE+ AG GG ES +A Sbjct: 69 LADADMRELAEAELADGAARITELENELQTALLPRDPNDERNIFLEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE++++K E + GE G K + I G AY LK E G HR+ R+ Sbjct: 129 GNLLRMYTRYAERQRWKVEIVSESPGEVGGYKEVIVRIVGEGAYSRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + E++I+ +D RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 189 ETESQGRIHTSACTVAVMPEAAEVGEVDINPADLRIDTFRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQH+N+AQA ++L A+L + E+Q + A+ + K+ IG G + Sbjct: 249 LPTGLVVECQDDRSQHRNRAQAMSVLAARLKDREIQ--AQQASEASTRKSLIGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ V+DGDL + + A A + Sbjct: 307 IRTYNF-PQGRITDHRINLTLYKIDAVMDGDLGELLDALAAEHQ 349 >gi|148255578|ref|YP_001240163.1| peptide chain release factor 2 [Bradyrhizobium sp. BTAi1] gi|146407751|gb|ABQ36257.1| bacterial peptide chain release factor 2 (bRF-2) [Bradyrhizobium sp. BTAi1] Length = 323 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 201/309 (65%), Positives = 248/309 (80%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L+++++ I +++ L DN+ ++EL E+D ++ E + L+ +K +V ++ E Sbjct: 1 MQERTSLEDSLTGIGKVERDLSDNIEMIELGEAENDAGVVTEAENALKALKKDVARRELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D YLEVHAGAGGTESQDWA MLLRMYTRWAEK FK E LE GEEAGI Sbjct: 61 ALLSGEADKFDTYLEVHAGAGGTESQDWAQMLLRMYTRWAEKHGFKIEYLEETQGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PVVDDSI+I+I E Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVVDDSIKIDIKE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ RSQHKN+AQAW+MLRA+LY Sbjct: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KREE A +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ + + VLDGDLD+ Sbjct: 241 EIELKKREEKAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300 Query: 346 FMKATLAIK 354 FM ATLA + Sbjct: 301 FMAATLAQR 309 >gi|332673011|gb|AEE69828.1| peptide chain release factor RF2 [Helicobacter pylori 83] Length = 385 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 174/352 (49%), Positives = 241/352 (68%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 35 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 94 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L ++ L ELA ++D L + ++ V+ + E +LSGE D+++A + + Sbjct: 95 KNSLDESTELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 154 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 155 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 214 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 215 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 274 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 275 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 332 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 333 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 384 >gi|259502724|ref|ZP_05745626.1| peptide chain release factor RF2 [Lactobacillus antri DSM 16041] gi|259169369|gb|EEW53864.1| peptide chain release factor RF2 [Lactobacillus antri DSM 16041] Length = 332 Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats. Identities = 156/325 (48%), Positives = 210/325 (64%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + +A+ L+ + L ++D+L D LEL E D + QE + Sbjct: 1 MAQPGFWDDNEKAQQLINDNNDLKEKRDTYVALRDQLADLETNLELLELEPDPDLEQEFA 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + ++ + LLS + D +A LE+H GAGGTE+QDW MLLRMY RWAE+ Sbjct: 61 ASFAKTTEALQQYRLSQLLSEKYDGKNAILEIHPGAGGTEAQDWGEMLLRMYVRWAEQHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 E GE AG+KS TLLIKG NA+G+L+ E+GVHRLVRISP+DS RRHTSF+S+ Sbjct: 121 LTVETANYEPGEVAGVKSVTLLIKGRNAFGYLRSEKGVHRLVRISPFDSAGRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DDS+E++I+ +D R+DT+R+SGAGGQH+N T+SAVRITH+PTG+V Q ERSQ Sbjct: 181 DVMPELDDSVEVDINPADLRVDTFRSSGAGGQHINKTESAVRITHLPTGLVASSQAERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 N+ A NML++KLYELE +K+ + E + EIGWG QIRSYV PY +VKD R+ Sbjct: 241 LLNRQTAMNMLKSKLYELEEEKKAKERAEIEGEQLEIGWGSQIRSYVFHPYTLVKDNRSG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + V+DG+LD F+ A L K Sbjct: 301 YETHNGQAVMDGELDPFINAYLQWK 325 >gi|146340475|ref|YP_001205523.1| peptide chain release factor 2 [Bradyrhizobium sp. ORS278] gi|146193281|emb|CAL77297.1| Peptide chain release factor 2 (RF-2) [Bradyrhizobium sp. ORS278] Length = 323 Score = 243 bits (619), Expect = 4e-62, Method: Composition-based stats. Identities = 200/309 (64%), Positives = 249/309 (80%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L+++++ I +++ L DN+ ++EL E+D ++ E + L+ +K EV ++ E Sbjct: 1 MQERTSLEDSLTGIGKVERELSDNIEMIELGEAENDAGVVAEAENALKELKKEVARRELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D YLEVHAGAGGTESQDWA+MLLRMYTRWAE FK E LE GEEAGI Sbjct: 61 ALLSGEADKFDTYLEVHAGAGGTESQDWASMLLRMYTRWAETHGFKVEYLEESLGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PV+DDSI+I+I E Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDDSIKIDIKE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ RSQHKN+AQAW+MLRA+LY Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KREE A +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ + S VL+GDLD+ Sbjct: 241 EIELKKREEKAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLNGDLDE 300 Query: 346 FMKATLAIK 354 FM ATLA + Sbjct: 301 FMAATLAQR 309 >gi|320095989|ref|ZP_08027602.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 178 str. F0338] gi|319977060|gb|EFW08790.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 178 str. F0338] Length = 372 Score = 243 bits (619), Expect = 4e-62, Method: Composition-based stats. Identities = 140/364 (38%), Positives = 218/364 (59%), Gaps = 10/364 (2%) Query: 1 MKLSRQLNCLGGLFD-------WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53 ++ + ++ L D + +++ LN K P LW + A+ + H Sbjct: 3 IEFTEEIQSLRLTMDNVLAVVRPERLRAQIAELNEKAAAPDLWDDPARAQEVTSALSHRQ 62 Query: 54 NAISFIKEIQDRLCDNLILLEL--ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 + + + + +R+ D ++E+ ++ IL E + +L +K +V + +LL GE Sbjct: 63 SELDRVVRMGERIDDLEAMVEMAGEDPDEAEEILDEAAADLDTLKKDVSDLEIRTLLDGE 122 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 D +A + + +GAGG ++ D+A +LLRMY RWAE+ + T+ ++ EEAG+KSAT Sbjct: 123 YDERNAVITIRSGAGGVDAADFAEILLRMYLRWAERHGYATKVMDTSYAEEAGLKSATFE 182 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 ++ P AYG L E G HRLVRISP+D+ RR TSF+++ V P+++ + IEI ES+ ++D Sbjct: 183 VQAPYAYGTLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHIEIPESELKVD 242 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 +R+SG GGQ VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L L ++ Sbjct: 243 VFRSSGPGGQSVNTTDSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVLRHEE 302 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + + WG Q+RSYVLQPYQMVKDLRT E +P V DGD+D F+ A + Sbjct: 303 EQAKKKELAGD-VKASWGDQMRSYVLQPYQMVKDLRTEFESGNPQAVFDGDIDGFINAGI 361 Query: 352 AIKK 355 +K Sbjct: 362 RWRK 365 >gi|242066770|ref|XP_002454674.1| hypothetical protein SORBIDRAFT_04g035390 [Sorghum bicolor] gi|241934505|gb|EES07650.1| hypothetical protein SORBIDRAFT_04g035390 [Sorghum bicolor] Length = 467 Score = 243 bits (619), Expect = 4e-62, Method: Composition-based stats. Identities = 152/351 (43%), Positives = 222/351 (63%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +++ + + W ++R L E P LW++ + A + RE+ L I + ++ Sbjct: 107 VAQSVKLIKKRLKWGWILERTKQLAVVLERPDLWEDPVFAGRVSREQGELMGKIKSVNQL 166 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L +++ +L LA EE+D + E+ L +++ + K+ +LLS + DS ++EV Sbjct: 167 EQELIEHIEMLRLAREENDNELEMESMRALADMRISAKEKELNALLSRDNDSCSCFIEVQ 226 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA M++ MY WA++R + +E GE AGIK AT+ + G A+G+ K Sbjct: 227 AGAGGTESMDWAAMVMNMYKSWAQRRGYTVTVVEEMPGEVAGIKRATIKVDGEYAFGYAK 286 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVRISP+DS RRHTSF+++ V P+ D S +I +SD RI+ +R+ G GGQ Sbjct: 287 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDASSRYQIKDSDLRIERFRSGGPGGQ 346 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H NTT+SA+RI HIPTG+ Q ERSQH NKA A +L+++L +LE+ ++ ++ Sbjct: 347 HANTTESAIRIVHIPTGISATSQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNAEHTQ 406 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 S EI WG QIRSYVL PY+MVKDLRTN E + P VL+GDLDDF+ L+ Sbjct: 407 SLNEISWGNQIRSYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDDFILNYLS 457 >gi|260881387|ref|ZP_05404264.2| peptide chain release factor 1 [Mitsuokella multacida DSM 20544] gi|260849258|gb|EEX69265.1| peptide chain release factor 1 [Mitsuokella multacida DSM 20544] Length = 360 Score = 243 bits (619), Expect = 4e-62, Method: Composition-based stats. Identities = 109/354 (30%), Positives = 180/354 (50%), Gaps = 12/354 (3%) Query: 10 LGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 + + + + L + DP ++ + + +E L I+ + ++ L Sbjct: 1 MKSVLEKLQAVEDKYRELESLISDPETMADMAKWQAYTKEHAALTPIITKFRRYKEVLKG 60 Query: 69 NLILLELALEEDDCSILQETSDN--LQRIKLEVEYKQF--ESLLSGEADSNDAYLEVHAG 124 + E D + + E K+ L D + +E+ G Sbjct: 61 IEEAKSMLGEALDHEMHAFVESELADLMEQKEALDKELPILLLPKDPNDEKNVIVEIRGG 120 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 GG E+ +A L RMY+R+AEK+ +K E ++ + E G K T ++ G AY +LK E Sbjct: 121 VGGEEAALFAGDLFRMYSRYAEKKGWKVELMDANATEIGGFKEVTFMVTGYGAYSYLKYE 180 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G HR+ R+ +S R HTS +++ V P + +++ I+ +D RIDTY ASGAGGQ+VN Sbjct: 181 SGTHRVQRVPVTESGGRIHTSAATVAVLP-EAEDVDVAINPADLRIDTYCASGAGGQYVN 239 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T++A+RITH+PTG+VVQCQ E+SQ KNK +A +LRA++ + Q E+ A + ++ Sbjct: 240 RTETAIRITHLPTGIVVQCQDEKSQLKNKEKAMKVLRARILDKARQ--EQEAAVAADRRS 297 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 ++G G +IR+Y P V D R + +LDGDLD+ + A + + Sbjct: 298 QVGSGDRSERIRTYNF-PQGRVTDHRIGLTLHKIDAILDGDLDELLAALITADQ 350 >gi|254520266|ref|ZP_05132322.1| peptide chain release factor 2 [Clostridium sp. 7_2_43FAA] gi|226914015|gb|EEH99216.1| peptide chain release factor 2 [Clostridium sp. 7_2_43FAA] Length = 325 Score = 243 bits (619), Expect = 4e-62, Method: Composition-based stats. Identities = 157/323 (48%), Positives = 218/323 (67%), Gaps = 1/323 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++ W+++ A+ + +E + + + I + + R+ D IL EL E+D+ SI + Sbjct: 1 MQENGFWEDIKRAEEVTKESKRIKDKIDRYESLVSRIEDVEILAELIDEDDEESIDE-VI 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ I+ +VE + E LLSGE D NDA L +HAG GG+++ DW MLLRMYTRW EKR Sbjct: 60 REIRSIEKDVEGYRIELLLSGEYDRNDAILTLHAGVGGSDANDWTEMLLRMYTRWCEKRG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ +G+EAGIKS TL +KG AYG+LK E+GVHRLVRISP+++N +R TSF+S+ Sbjct: 120 FKVETLDYLEGDEAGIKSVTLKVKGEFAYGYLKAEKGVHRLVRISPFNANGKRQTSFASV 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + +IEI D +IDTYRASGAGGQHVN T+SA+RITH+PTG+VVQCQ ERSQ Sbjct: 180 EVLPELTKDQDIEIRSEDLKIDTYRASGAGGQHVNKTESAIRITHLPTGIVVQCQSERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 NK A ML++KL +L+ + +E ++GWG QIRSYV PY MVKD RT Sbjct: 240 FSNKDTAMAMLKSKLIDLKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYNMVKDHRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E + + V++G++D+F+ A L Sbjct: 300 EETANLNAVMNGEIDNFITAYLK 322 >gi|307720247|ref|YP_003891387.1| bacterial peptide chain release factor 2 (bRF-2) [Sulfurimonas autotrophica DSM 16294] gi|306978340|gb|ADN08375.1| bacterial peptide chain release factor 2 (bRF-2) [Sulfurimonas autotrophica DSM 16294] Length = 365 Score = 243 bits (619), Expect = 4e-62, Method: Composition-based stats. Identities = 172/351 (49%), Positives = 236/351 (67%), Gaps = 2/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + ++ + G+ + RL + D W N A + +E+ L + Sbjct: 13 IDMKMKNITGVVEPKKIQTRLQEIQELENDQDFWNNADYAAKIQKEKTQLQRKLDKYNTA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ + D L ++A EEDD L+ ++ ++ ++ + E LLSGE D+N+A L +H Sbjct: 73 KNAVEDAKELYDMAKEEDDSESLEALYEDAPNLEKQIRDMEIEVLLSGETDANNAILSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA MLLRMY RWAE+R FK E L+ G+EAGIK ++LIKG NAYG+LK Sbjct: 133 PGAGGTESQDWAEMLLRMYKRWAERRGFKVEVLDYQAGDEAGIKDVSVLIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVRISP+DSN++RHTSF+S+ V P +DD I+I I + D RIDTYR+SGAGGQH Sbjct: 193 VENGIHRLVRISPFDSNAKRHTSFASVMVSPEIDDDIDITIEDKDIRIDTYRSSGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SA+R+THI TGVVVQCQ +RSQHKNKA A ML+++LYELEL++++ Sbjct: 253 VNKTESAIRLTHIETGVVVQCQNDRSQHKNKATAMKMLKSRLYELELEEQKAKEAGIA-- 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K+EIGWG QIRSYV+QPYQ VKD R+N ++ S +LDGD+D+ ++ L Sbjct: 311 KSEIGWGHQIRSYVMQPYQQVKDTRSNEAYSNVSGILDGDIDNMIEGVLIA 361 >gi|297172547|gb|ADI23517.1| protein chain release factor B [uncultured Gemmatimonadales bacterium HF0770_41L09] Length = 331 Score = 243 bits (619), Expect = 4e-62, Method: Composition-based stats. Identities = 174/323 (53%), Positives = 222/323 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + +AK + E L + + + + L+EL EE+D + E + Sbjct: 1 MVQPGFWDSQDQAKATIDESNRLKGWLDPWSSLDAGVSELTALVELLEEEEDAELDAEFT 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L ++ ++E + ++L GE D DA + +H GAGG ESQDWA ML+RMYTRW+E+R Sbjct: 61 RGLASVEKDLEVLEVRTMLQGEDDHRDAIVTIHPGAGGLESQDWAGMLMRMYTRWSERRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L++ EE GIKSATL IKG AYG+LK E GVHRLVRISP+D SRRHTSF+S+ Sbjct: 121 FGIEVLDLQLAEEGGIKSATLEIKGECAYGYLKAEGGVHRLVRISPFDQQSRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 ++YP+V+D IEI+I ESD RIDTYRASGAGGQHVN TDSAVRITH PTG+V CQQERSQ Sbjct: 181 FIYPLVEDGIEIDIDESDLRIDTYRASGAGGQHVNKTDSAVRITHEPTGIVATCQQERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 HKNK+ A MLRA LY+ LQ++E + E++KTEIG+G QIRSYV QPY MV D RT Sbjct: 241 HKNKSTAMKMLRAALYQHALQEQERERAVLEATKTEIGFGNQIRSYVFQPYTMVNDHRTE 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 ++ T V+DGDLD F++A L Sbjct: 301 LKITDVQGVMDGDLDPFIEAYLK 323 >gi|183602511|ref|ZP_02963876.1| peptide chain release factor 2 [Bifidobacterium animalis subsp. lactis HN019] gi|219683556|ref|YP_002469939.1| peptide chain release factor 2 [Bifidobacterium animalis subsp. lactis AD011] gi|241190585|ref|YP_002967979.1| peptide chain release factor 2 [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195991|ref|YP_002969546.1| peptide chain release factor 2 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218152|gb|EDT88798.1| peptide chain release factor 2 [Bifidobacterium animalis subsp. lactis HN019] gi|219621206|gb|ACL29363.1| peptide chain release factor 2 [Bifidobacterium animalis subsp. lactis AD011] gi|240248977|gb|ACS45917.1| peptide chain release factor 2 [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250545|gb|ACS47484.1| peptide chain release factor 2 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289178324|gb|ADC85570.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bifidobacterium animalis subsp. lactis BB-12] gi|295793572|gb|ADG33107.1| peptide chain release factor 2 [Bifidobacterium animalis subsp. lactis V9] Length = 377 Score = 243 bits (619), Expect = 4e-62, Method: Composition-based stats. Identities = 143/351 (40%), Positives = 210/351 (59%), Gaps = 1/351 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + + D D + + L + P LW + A+ +M + + + + Sbjct: 14 RAKYESIALALDTDRLKSQEAELEQQASAPGLWDDSEHAQKVMSQLSACQSQLKHLSSAA 73 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 RL D L+EL EE+D L E ++ I+ +++ + E+L+ GE DS A + + + Sbjct: 74 SRLDDVATLIELGQEENDADTLHEAQTEIESIQKDLDQMEIETLMDGEYDSRSAVVTIRS 133 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGG ++ D+A MLLRMY RWAE+ +K + ++ EEAGIKSAT I P AYG + Sbjct: 134 GAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQIDAPYAYGRMSV 193 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G HRLVRISP+D+ RR TSF+++ V P+V+ + IE+ +S+ R+DTY ASG GGQ V Sbjct: 194 EGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIEVPDSEIRVDTYCASGPGGQGV 253 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTT SAVRITH+PTG+VV Q ERSQ +N+A A +L+++L L ++ + Sbjct: 254 NTTYSAVRITHLPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHEEEAKKKKELAGD- 312 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD+D+F++A + + Sbjct: 313 IKASWGDQMRSYVLHPYQMVKDLRTGCETSQTQAVFDGDIDEFIQAGIRWR 363 >gi|325971169|ref|YP_004247360.1| peptide chain release factor 2 [Spirochaeta sp. Buddy] gi|324026407|gb|ADY13166.1| peptide chain release factor 2 [Spirochaeta sp. Buddy] Length = 367 Score = 243 bits (619), Expect = 4e-62, Method: Composition-based stats. Identities = 158/348 (45%), Positives = 223/348 (64%), Gaps = 2/348 (0%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 + D D + + L TKT + W + A+ L + L ++ KE+ D L D Sbjct: 18 TVWRRLDPDKMLSEIQKLETKTLEAGFWDDRKGAEQLFAQLNGLKDSYYPWKELIDSLGD 77 Query: 69 NLILLELA-LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L+E+ E D+ + + ++K + + ++LL G+ D ND +L +HAGAGG Sbjct: 78 MAELMEIYADEPDNPEEEAQIDAQITQLKEQYGQLKLKTLLDGKFDKNDCFLTIHAGAGG 137 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ DWANML+RMY R+ E+ FK+E L++ + +E GIKSAT+ + GP ++G+LKGE GV Sbjct: 138 NEASDWANMLMRMYLRYCERNGFKSEVLDLLE-DEGGIKSATIRVSGPYSFGYLKGEAGV 196 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVRISP+DS RRHTSF+S++ PV+DD+IEI++ D R+DTYRA GAGGQHVN TD Sbjct: 197 HRLVRISPFDSQKRRHTSFTSVYASPVIDDTIEIDLKPEDYRLDTYRAGGAGGQHVNKTD 256 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH +G+VVQCQ ERSQ NK A+ ML+++LYE + +E+ K EI Sbjct: 257 SAVRITHYESGIVVQCQNERSQVMNKDVAFKMLKSRLYEYYRELKEKEHQKDAIEKKEIT 316 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG QIRSYV QPY MVKD RT++ + V+DG++ DF++ L + Sbjct: 317 WGSQIRSYVFQPYTMVKDHRTSVTVGNIQAVMDGEIGDFIEGYLQWAQ 364 >gi|313204692|ref|YP_004043349.1| bacterial peptide chain release factor 2 (brf-2) [Paludibacter propionicigenes WB4] gi|312444008|gb|ADQ80364.1| bacterial peptide chain release factor 2 (bRF-2) [Paludibacter propionicigenes WB4] Length = 368 Score = 243 bits (619), Expect = 4e-62, Method: Composition-based stats. Identities = 131/356 (36%), Positives = 213/356 (59%), Gaps = 11/356 (3%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 + + L D D + ++ +T+ P W + A+ MR+ + L N ++ ++ Sbjct: 12 ERESALRRYLDVDTKLIQIEEEELRTQVPGFWDDAKAAEAQMRKVKELKNWVTGYNAVKT 71 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 + + + ++ +E + + +E + +++LS E D A +++ G Sbjct: 72 AADELQLAFDFYK--EEAVSEEEVDEAYRHAMELLENIEMKNMLSHEEDKLGAVIKIVGG 129 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGGTE+QDWA+ML RMY RW E++ + E + +G+EAGIK+ T+ I+G AYG+LK E Sbjct: 130 AGGTEAQDWASMLFRMYQRWCERQGYACEITNLQEGDEAGIKTVTMQIEGEMAYGYLKSE 189 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHRLVR+SP+++ +R TSF+S++V P+VDD+IEIE++ DT+R+SGAGGQ+VN Sbjct: 190 NGVHRLVRVSPFNAQGKRMTSFTSVYVVPLVDDTIEIEVNPGMLSWDTFRSSGAGGQNVN 249 Query: 245 TTDSAVRITH--------IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 ++ VR+ + P +V++ + RSQ NK A +L+++LYELEL+KR Sbjct: 250 KVETGVRLHYKFVNPVTNQPDEIVIENTESRSQFGNKDNAIRLLKSQLYELELEKRRAAT 309 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + E+ K +I WG QIRSYV + VKD RTN + ++ + V+DGD+D F+KA L Sbjct: 310 AVVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSNVNGVMDGDIDAFIKAYLM 364 >gi|284046044|ref|YP_003396384.1| peptide chain release factor 2 [Conexibacter woesei DSM 14684] gi|283950265|gb|ADB53009.1| peptide chain release factor 2 [Conexibacter woesei DSM 14684] Length = 372 Score = 243 bits (619), Expect = 4e-62, Method: Composition-based stats. Identities = 163/349 (46%), Positives = 215/349 (61%), Gaps = 2/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + QL L D ++ L + P W + +A E + + + Sbjct: 20 IREQLTLLADYVDPKALEAHVAELEQEMGAPGFWDSQEKAAKTSAEHARASRKLDTYRTL 79 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L E+ ++D + E ++ + + +E + E L SG D DA + V+ Sbjct: 80 VSDVEDLEPLAEM--AQEDPELEAELAEQIASAERRLEQLEEERLFSGRYDGGDALVTVN 137 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGT++QDWA M+LRM RWAEKR F E LE+ GEEAGIKSAT +KG NAYG Sbjct: 138 AGAGGTDAQDWAEMVLRMEMRWAEKRGFDVELLEVSAGEEAGIKSATFRVKGENAYGLYG 197 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVR+SP+DS +RR TSF+ + V PVV+D+ E+EI + D ++DTYRASGAGGQH Sbjct: 198 AEKGVHRLVRLSPFDSANRRQTSFAGVEVAPVVEDAAEVEIDDDDLQVDTYRASGAGGQH 257 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSAVRITH P+G+VVQCQ ERSQ N+A A MLR+KL ELE ++R+E + Sbjct: 258 VNKTDSAVRITHRPSGIVVQCQNERSQSSNRATAMAMLRSKLVELEERRRQEEIAKEKGE 317 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++ +G QIRSYVL PY MVKD RT E VLDGDLD F++A L Sbjct: 318 AQDVNFGSQIRSYVLHPYSMVKDHRTEFEIGDTGRVLDGDLDGFVRAYL 366 >gi|169794367|ref|YP_001712160.1| peptide chain release factor 2 [Acinetobacter baumannii AYE] gi|184159830|ref|YP_001848169.1| protein chain release factor B [Acinetobacter baumannii ACICU] gi|213159055|ref|YP_002321053.1| peptide chain release factor 2 [Acinetobacter baumannii AB0057] gi|215481924|ref|YP_002324106.1| peptide chain release factor 2 [Acinetobacter baumannii AB307-0294] gi|239503845|ref|ZP_04663155.1| peptide chain release factor 2 [Acinetobacter baumannii AB900] gi|260557921|ref|ZP_05830134.1| peptide chain release factor 2 [Acinetobacter baumannii ATCC 19606] gi|332854818|ref|ZP_08435581.1| peptide chain release factor 2 [Acinetobacter baumannii 6013150] gi|332868948|ref|ZP_08438507.1| peptide chain release factor 2 [Acinetobacter baumannii 6013113] gi|332872826|ref|ZP_08440791.1| peptide chain release factor 2 [Acinetobacter baumannii 6014059] gi|169147294|emb|CAM85155.1| peptide chain release factor 2 [Acinetobacter baumannii AYE] gi|183211424|gb|ACC58822.1| Protein chain release factor B [Acinetobacter baumannii ACICU] gi|213058215|gb|ACJ43117.1| peptide chain release factor 2 [Acinetobacter baumannii AB0057] gi|213988530|gb|ACJ58829.1| peptide chain release factor 2 [Acinetobacter baumannii AB307-0294] gi|260408712|gb|EEX02017.1| peptide chain release factor 2 [Acinetobacter baumannii ATCC 19606] gi|322509742|gb|ADX05196.1| Peptide chain release factor 2 [Acinetobacter baumannii 1656-2] gi|323519757|gb|ADX94138.1| protein chain release factor B [Acinetobacter baumannii TCDC-AB0715] gi|332727820|gb|EGJ59224.1| peptide chain release factor 2 [Acinetobacter baumannii 6013150] gi|332732991|gb|EGJ64193.1| peptide chain release factor 2 [Acinetobacter baumannii 6013113] gi|332738987|gb|EGJ69849.1| peptide chain release factor 2 [Acinetobacter baumannii 6014059] Length = 310 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 170/307 (55%), Positives = 224/307 (72%), Gaps = 1/307 (0%) Query: 47 RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106 +E+ L+N I+ + + +L D +L+LA+E DD S+L++ L + E+ +F Sbjct: 3 KEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELSTAEEELAKLEFRR 62 Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S D N Y+E+ AG+GGTE+QDWA+MLLRMY RW E+ FK E +E+ DG+ AGIK Sbjct: 63 MFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAGIK 122 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ ++G AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+ S Sbjct: 123 SATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDINPS 182 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D R DTYRASGAGGQH+N TDSAVR+THIPTG+VV CQ +RSQH N+ AW LRAKLYE Sbjct: 183 DVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQLRAKLYE 242 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LE+QKR E A E SK++IGWG QIRSYVL +KDLRT +E ++ VLDGDLD F Sbjct: 243 LEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDD-SRIKDLRTGVENSNTGAVLDGDLDRF 301 Query: 347 MKATLAI 353 ++A+L Sbjct: 302 IEASLKQ 308 >gi|20806672|ref|NP_621843.1| peptide chain release factor 1 [Thermoanaerobacter tengcongensis MB4] gi|22096035|sp|Q8RD98|RF1_THETN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|20515122|gb|AAM23447.1| Protein chain release factor A [Thermoanaerobacter tengcongensis MB4] Length = 356 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 122/346 (35%), Positives = 191/346 (55%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72 R L+ K DP++ NV E + ++E +++ + +E + L + L Sbjct: 5 LQAIEDRYVELSQKISDPNVISNVEEWRKYVKEHAAIEDIVLKYREYKKVLEEIKATEEL 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L EE +E S ++ + +E + L D + +E+ AGAGG E+ Sbjct: 65 LSSQDEELKEMAEEELSQLEEKKEKLMEEIKILLLPKDPNDEKNVIMEIRAGAGGEEAAL 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMYT +AEK+ +K E + + + G K I G AY LK E GVHR+ R Sbjct: 125 FAYDLFRMYTMYAEKKGWKVEIMSANKTDIGGFKEVIFSISGKGAYSRLKYESGVHRVQR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 I ++ R HTS +++ V P + +++EI+ +D +ID +R+SG GGQ VNTTDSAVR+ Sbjct: 185 IPTTEAGGRIHTSTATVAVLP-EAEEVDVEINPNDIKIDVFRSSGHGGQSVNTTDSAVRV 243 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV CQ ERSQ +N+ +A +LRAKLYE+ L++++ I E+ K+++G G Sbjct: 244 THIPTGIVVTCQDERSQIQNRERALKILRAKLYEMALKEQQ--REIAEARKSQVGTGERS 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +VLDG+LD+ + A + + Sbjct: 302 ERIRTYNF-PQGRVTDHRIGLTLYKLQEVLDGELDEIIDALILNDQ 346 >gi|33864328|ref|NP_895888.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT 9313] gi|33641108|emb|CAE22237.1| peptide-chain-release factor RF-2 [Prochlorococcus marinus str. MIT 9313] Length = 375 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 148/352 (42%), Positives = 208/352 (59%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ +L D R L P W + A+ MR+ + ++ I Sbjct: 13 ELTDRLGQAQDCLDVPALNARQQDLEQLAAQPDFWNDQQNAQKQMRQLDEVKAQLTQITL 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D LEL E D +L E L++++ ++ + E LLSGE D A L + Sbjct: 73 WRSAVNDAQATLELYDLEPDDEMLSEAQSGLKQLRQGLDRWELERLLSGEYDKEGAVLSI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGT++QDWA MLLRMYTRWAE E+ +GEEAGIKSAT+ I+G AYG+L Sbjct: 133 NAGAGGTDAQDWAQMLLRMYTRWAEDHDMTVTVDELSEGEEAGIKSATVEIEGRYAYGYL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E+G HRLVRISP+++N +R TSF+ + + P +D +E++I E D + T R+ GAGGQ Sbjct: 193 RNEKGTHRLVRISPFNANGKRQTSFAGVEIMPKIDQEVELDIPEKDLEVTTSRSGGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN ++AVRI HIPTG+ V+C QERSQ +NK +A +L+AKL + ++R Sbjct: 253 NVNKVETAVRILHIPTGLAVRCTQERSQLQNKEKALALLKAKLMVIAQEQRAAEIADIRG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 E WG QIR+YV PYQMVKDLRT E T V++GDLD F++ L Sbjct: 313 DIVEAAWGNQIRNYVFHPYQMVKDLRTAEETTDVQAVMNGDLDRFIQTLLRQ 364 >gi|312142853|ref|YP_003994299.1| peptide chain release factor 2 [Halanaerobium sp. 'sapolanicus'] gi|311903504|gb|ADQ13945.1| peptide chain release factor 2 [Halanaerobium sp. 'sapolanicus'] Length = 346 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 158/342 (46%), Positives = 219/342 (64%), Gaps = 1/342 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 FD D + + + W + A+ + L + I E++++ + + Sbjct: 3 YFDKDELESEKAAIEKEMAQSGFWDDKENARHKSQRLDKLKKRLKVISELEEKFDEI-EI 61 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + E+ ++ +E + +++ +++ + + L+ D ++A L +H GAGGTESQD Sbjct: 62 YQQLAAEEGENLREELEQSFSQLEKKLDNLELKLRLNEPYDDHNAILSIHPGAGGTESQD 121 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA MLLRMY RWAE ++ E LE G+EAG+KS TLLI G A+G+LKGE+GVHRLVR Sbjct: 122 WAEMLLRMYRRWAESSGYQLETLEFSAGDEAGVKSVTLLISGDYAFGYLKGERGVHRLVR 181 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 ISP+DS+ RRHTSF+S+ V P +DD +E++I E+D RI+TYRASGAGGQHVN TDSAVRI Sbjct: 182 ISPFDSSGRRHTSFASVDVLPELDDELEVDIDENDLRIETYRASGAGGQHVNKTDSAVRI 241 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 TH PTGVVVQCQ +RSQHKNK A +L +KL EL+ + + E EI WG QI Sbjct: 242 THQPTGVVVQCQSQRSQHKNKNVAMKILSSKLLELKEEAQAEKIEDLRGEHKEIAWGSQI 301 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RSYVL PY M+KD RT+ E+ + VLDG LD+F++ L K Sbjct: 302 RSYVLHPYNMIKDHRTDFEEGNVDKVLDGYLDEFIEEYLKYK 343 >gi|295982099|pdb|2X9R|Y Chain Y, Structure Of The 70s Ribosome Bound To Release Factor 2 And A Substrate Analog Provides Insights Into Catalysis Of Peptide Release gi|295982158|pdb|2X9T|Y Chain Y, Structure Of The 70s Ribosome Bound To Release Factor 2 And A Substrate Analog Provides Insights Into Catalysis Of Peptide Release Length = 351 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 153/352 (43%), Positives = 208/352 (59%), Gaps = 5/352 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+++L L G D RL L + EDP LW + A+ + +E L + + + Sbjct: 1 LAQRLEGLRGYLDIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRSL 60 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L L L+E E+ + L+ +++ ++LL+ +A L + Sbjct: 61 ESDLQGLLELMEELPAEEREA----LKPELEEAAKKLDELYHQTLLNFPHAEKNAILTIQ 116 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTE+ DWA MLLRMYTR+AE++ F+ E +++ G EAGI A +L+KG NAYG L Sbjct: 117 PGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLLS 176 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+D++ RRHTSF+ + V P VD+ +E+ + + RID RASG GGQ Sbjct: 177 PEAGVHRLVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQG 236 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+ H+PTG+ V CQ RSQ KNK A +L+A+LYELE +KREE Sbjct: 237 VNTTDSAVRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRGE 296 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 I WG QIRSYVL VKD RT + + P +VLDGDL D + A L K Sbjct: 297 VRPIEWGSQIRSYVLDK-NYVKDHRTGLMRHDPENVLDGDLMDLIWAGLEWK 347 >gi|260550208|ref|ZP_05824421.1| peptide chain release factor 2 [Acinetobacter sp. RUH2624] gi|260406736|gb|EEX00216.1| peptide chain release factor 2 [Acinetobacter sp. RUH2624] Length = 310 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 169/307 (55%), Positives = 223/307 (72%), Gaps = 1/307 (0%) Query: 47 RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106 +E+ L+N I+ + + +L D +L+LA+E DD S+L + L + E+ +F Sbjct: 3 KEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLVDVQSELGTAEEELAKLEFRR 62 Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S D N Y+E+ AG+GGTE+QDWA+MLLRMY RW E+ FK E +E+ DG+ AGIK Sbjct: 63 MFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAGIK 122 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ ++G AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+ S Sbjct: 123 SATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDINPS 182 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D R DTYRASGAGGQH+N TDSAVR+THIP+G+VV CQ +RSQH N+ AW LRAKLYE Sbjct: 183 DVRTDTYRASGAGGQHINKTDSAVRLTHIPSGIVVACQNQRSQHANRDHAWKQLRAKLYE 242 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LE+QKR E A E SK++IGWG QIRSYVL +KDLRT +E ++ VLDGDLD F Sbjct: 243 LEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDD-SRIKDLRTGVENSNTGAVLDGDLDRF 301 Query: 347 MKATLAI 353 ++A+L Sbjct: 302 IEASLKQ 308 >gi|209527406|ref|ZP_03275912.1| peptide chain release factor 2 [Arthrospira maxima CS-328] gi|209492141|gb|EDZ92490.1| peptide chain release factor 2 [Arthrospira maxima CS-328] Length = 339 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 143/329 (43%), Positives = 211/329 (64%), Gaps = 1/329 (0%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 P+ W + +A+ ++ L + + ++ + L D + EL EDD S+ Q Sbjct: 2 EQLAAQPNFWDDQTQAQKTLQTLSDLKSVLQQQQDWRKTLEDTGAIAELLELEDDESLRQ 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E N+ + +++ + + LLSG D + A L ++AGAGGT++QDWA MLLRMYTRW E Sbjct: 62 EAESNVVHLGRDIDRWELQQLLSGPYDRSGAVLTINAGAGGTDAQDWAEMLLRMYTRWGE 121 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + +K EI +G+EAGIKSATL ++GP AYG+LK E+G HRLVRISP+++N +R TSF Sbjct: 122 AQGYKVHLAEISEGDEAGIKSATLEMEGPYAYGYLKAEKGTHRLVRISPFNANGKRQTSF 181 Query: 207 SSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 + + + P+ + +I ++I E D I T RA G GGQ+VN ++AVRI HIPTG+ V+C Q Sbjct: 182 AGVEIMPILDEGAINLDIPEKDLEITTSRAGGKGGQNVNKVETAVRIVHIPTGIAVRCTQ 241 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQ +N+ +A +L+AKL + ++R + E WG QIR+YV PYQMVKD Sbjct: 242 ERSQLQNREKAMALLKAKLLVVAQEQRAQAIAEIRGDLVEAAWGNQIRNYVFHPYQMVKD 301 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 LRT E T+ +DV++G+LD F++A L + Sbjct: 302 LRTGEETTAINDVMNGELDGFIQAYLRQE 330 >gi|149196339|ref|ZP_01873394.1| peptide chain release factor RF-2 [Lentisphaera araneosa HTCC2155] gi|149140600|gb|EDM28998.1| peptide chain release factor RF-2 [Lentisphaera araneosa HTCC2155] Length = 332 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 161/324 (49%), Positives = 213/324 (65%), Gaps = 2/324 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 W + AK + L + + KE++ R+ D + L EL EE S L + + Sbjct: 1 MGSSSFWDDSNAAKSTVDRVSALKSVVVPYKELEARVEDFITLSELIEEEGASSELMDDA 60 Query: 90 DNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + ++ + S LSG+ DS +L ++AGAGGTES DWA+MLLRMY RWAE + Sbjct: 61 GEESPELEKALDDLELLSFLSGKYDSGSCFLSINAGAGGTESCDWADMLLRMYRRWAESK 120 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK + I +GEEAGIK+ T+ I+GP A+G+LK E+GVHRLVR+SP+DSN RRHTSF+S Sbjct: 121 GFKVTFVSILEGEEAGIKNCTMFIEGPMAFGYLKAERGVHRLVRVSPFDSNKRRHTSFTS 180 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 I V P + D E++I D R+DT+RASGAGGQHVNTTDSA+R+TH+PTG+VV CQ ERS Sbjct: 181 IDVVPDIGDEAEVDIDAKDLRVDTFRASGAGGQHVNTTDSAIRLTHLPTGIVVSCQMERS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QHKN+A A ML AKL EL+ +RE + K +IGWG QIRSYVL + VKD RT Sbjct: 241 QHKNRATAMKMLGAKLEELKQAEREAELDANAGEKNDIGWGSQIRSYVLDD-RRVKDHRT 299 Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352 N ++ VLDGD+D F+++ L Sbjct: 300 NHSTSNTDKVLDGDIDPFIQSFLR 323 >gi|166032746|ref|ZP_02235575.1| hypothetical protein DORFOR_02461 [Dorea formicigenerans ATCC 27755] gi|166027103|gb|EDR45860.1| hypothetical protein DORFOR_02461 [Dorea formicigenerans ATCC 27755] Length = 376 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 121/351 (34%), Positives = 192/351 (54%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ + RL + ++ ++P + + + LM+E+ L + KE + + Sbjct: 21 MFDKLEDLLIRLEEILSELQEPDVASDPNRFRKLMKEQSELTPIVEAYKEYKACKQNIEE 80 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127 LEL EE D + + + L K VE + E D + +E+ AGAGG Sbjct: 81 SLELLNEESDEDMRELAKEELNESKARVEELEHELKILLLPKDPNDDKNVVVEIRAGAGG 140 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY +AE +++K E +E + G+K+ T +I G AY +K E GV Sbjct: 141 DEAALFAAEIYRMYLHYAESKRWKVELVECEEIGIGGMKNVTFMIDGQGAYSMMKYESGV 200 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P + +++ I E D RID RASG GGQ VNTTD Sbjct: 201 HRVQRVPETESGGRIHTSTITVAVMP-EAEDVDVHIDEKDIRIDVMRASGNGGQCVNTTD 259 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+V+ Q E+SQ +NK +A+ +LRAKLY+LE QK+ + E+ K++IG Sbjct: 260 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFALLRAKLYDLECQKQHD--AEAEARKSQIG 317 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++GD+ + + A +A + Sbjct: 318 TGDRSEKIRTYNF-PQGRVTDHRIGLTLYKLDKIMNGDIQEIIDACIAADQ 367 >gi|289432457|ref|YP_003462330.1| hypothetical protein DehalGT_0507 [Dehalococcoides sp. GT] gi|288946177|gb|ADC73874.1| hypothetical protein DehalGT_0507 [Dehalococcoides sp. GT] Length = 361 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 146/352 (41%), Positives = 210/352 (59%), Gaps = 2/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++ D ++ L T + +P WQ+ A+ M++ + Sbjct: 7 ELKGRIFSDMVRLDVSAKELEITELETASSNPDFWQDQQNAQKAMKKLAANKRTSELWRG 66 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ R+ D L L +D S+ E + + E++ + SG+ D+ +A L V Sbjct: 67 LERRINDLTELAVL--SREDPSLSNEIEHEISGLTAELDSLEVGLAFSGQYDNRNALLTV 124 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGG ESQDWA MLLRM+ RWA K+ F E L+ GEEAGIKSATL I+G AYG+L Sbjct: 125 HAGAGGVESQDWAGMLLRMFMRWAAKKGFGMEILDQSLGEEAGIKSATLQIEGEYAYGFL 184 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRL+R+SP+D++ RHTSF+ + + P +DS++I+I D +ID +R+SG GGQ Sbjct: 185 KSEHGVHRLIRLSPFDADHARHTSFALVEIMPEAEDSVDIDIKPEDIKIDMFRSSGPGGQ 244 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +V +AVR+THIP+G+VV Q ERSQH+N+ A +L +KL +E+ KR E + Sbjct: 245 NVQKVSTAVRVTHIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKLKG 304 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + WG QIRSYVL PY+MVKD RT+ E + VL+G+LD F+ A L Sbjct: 305 ERISAEWGSQIRSYVLHPYKMVKDHRTDYEVGNAEAVLEGELDGFISAYLRQ 356 >gi|225568388|ref|ZP_03777413.1| hypothetical protein CLOHYLEM_04465 [Clostridium hylemonae DSM 15053] gi|225162616|gb|EEG75235.1| hypothetical protein CLOHYLEM_04465 [Clostridium hylemonae DSM 15053] Length = 357 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 123/351 (35%), Positives = 191/351 (54%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ + R L ++ ++P + N + LM+E+ L + KE + Sbjct: 1 MFDKLEDLLIRYEELMSELQEPDVVNNQERFRRLMKEQNDLAPIVEAYKEYKACRQAIED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127 L + EE D + + D L K VE + E D + +E+ AGAGG Sbjct: 61 SLLMLEEESDEEMRELAKDELNESKARVEELEHELKILLLPKDPNDDKNVMVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY +AE R++KTE + I + G K +I G AY LK E GV Sbjct: 121 DEAALFAAEIYRMYVHYAEGRRWKTEIISISENGIGGFKEVVFMITGQGAYSRLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ + P + +++ I E D RID RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTVTVAIMP-EAEEVDVVIDEKDIRIDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+V+ Q E+SQ +NK +A+ +LR+KLY+LE++K++ A+ E+ +++IG Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLEMEKKQ--ASEAEARRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + VL+GDLD+ + + +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSVLNGDLDEVIDSLIAADQ 347 >gi|15611227|ref|NP_222878.1| peptide chain release factor 2 [Helicobacter pylori J99] gi|7388058|sp|Q9ZMR1|RF2_HELPJ RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|4154673|gb|AAD05740.1| PEPTIDE CHAIN RELEASE FACTOR 2 (RF-2) [Helicobacter pylori J99] Length = 363 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 174/352 (49%), Positives = 243/352 (69%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + +++ Sbjct: 13 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKM 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L +++ L ELA + D L + ++ V+ + E +LSGE D+++A + + Sbjct: 73 KNSLDESVELFELAQNDSDEVTLSLLYEEAPTLEHSVQKVEIEIMLSGENDASNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE++ FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERKSFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+NI ++ +LDGD+D ++ L K Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362 >gi|262377202|ref|ZP_06070427.1| peptide chain release factor 2 [Acinetobacter lwoffii SH145] gi|262307940|gb|EEY89078.1| peptide chain release factor 2 [Acinetobacter lwoffii SH145] Length = 310 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 170/307 (55%), Positives = 221/307 (71%), Gaps = 1/307 (0%) Query: 47 RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106 +E+ L+N ++ + + +L D LL+LA+E DD S+L++ L + E+ +F Sbjct: 3 KEKGELENVLNVLDRLSTQLEDAQALLDLAVEADDESLLEDVQAELSTAEEELAKLEFRR 62 Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + + D N YLE+ AG+GGTE+QDWA+MLLRMY RW E+ FK E +E DG+ AGIK Sbjct: 63 MFNNPMDPNPCYLEIQAGSGGTEAQDWASMLLRMYLRWIERHGFKAEVMEESDGDVAGIK 122 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ ++G AYGWL+ E GVHRLVR SP+DS +RRHTSFS+++V P VDD+IEIEI+ S Sbjct: 123 SATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFVSPEVDDNIEIEINPS 182 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D R DTYRASGAGGQH+N TDSAVR+TH PTG+VV CQ +RSQH N+ AW LRAKLYE Sbjct: 183 DVRTDTYRASGAGGQHINKTDSAVRLTHAPTGIVVACQNQRSQHANRDHAWKQLRAKLYE 242 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LE+ KR E A E SK++IGWG QIRSYVL +KDLRT +E ++ VLDGDLD F Sbjct: 243 LEMSKRNEAAQALEDSKSDIGWGSQIRSYVLDD-SRIKDLRTGVENSNTGAVLDGDLDKF 301 Query: 347 MKATLAI 353 ++A+L Sbjct: 302 IEASLKQ 308 >gi|153809900|ref|ZP_01962568.1| hypothetical protein RUMOBE_00281 [Ruminococcus obeum ATCC 29174] gi|149834078|gb|EDM89158.1| hypothetical protein RUMOBE_00281 [Ruminococcus obeum ATCC 29174] Length = 359 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 121/351 (34%), Positives = 191/351 (54%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ + R + + +P + N + LM+E+ L + KE +D Sbjct: 1 MFDKLEDLLVRFEEVLNELGEPGVTDNQERFQKLMKEQSELQPIVDAYKEYKDNKETIQD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L + EE D + + + L K + + L DS + +E+ AGAGG Sbjct: 61 SLSMLEEEKDEEMREMLKEELSDAKKRVEELEKELKILLLPKDPNDSKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY ++AE R++KTE + +++ G K T +I+G AY LK E GV Sbjct: 121 DEAALFAAEIYRMYVKYAESRRWKTEMMSLNENGIGGFKEVTFMIQGQGAYSRLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ + P + I+ + +DC+ D +RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTCTVAIMP-EAEEIDFHLDMNDCKFDVFRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V+ CQ E+SQ KNK +A +LR++LYE+EL K+ + E+ +++IG Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYEMELAKQHD--AEAEARRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + VL GDLD+ + + +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHRLDAVLGGDLDEILDSLIAADQ 347 >gi|298369801|ref|ZP_06981117.1| peptide chain release factor 1 [Neisseria sp. oral taxon 014 str. F0314] gi|298281261|gb|EFI22750.1| peptide chain release factor 1 [Neisseria sp. oral taxon 014 str. F0314] Length = 358 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 122/349 (34%), Positives = 176/349 (50%), Gaps = 8/349 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + RL + P ++ + L RE L + + Q D Sbjct: 4 SILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQSDLA 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E+ + + E + + Q L D + ++EV AG GG E Sbjct: 64 DAEEMLSDPEMKDFAAEEIEAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY+R+AE+ +++ E + ++ E G K I G AY LK E G HR Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ V P D+ +IE++ +D RIDT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGDL++ A +A + Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQ 349 >gi|261378877|ref|ZP_05983450.1| peptide chain release factor 1 [Neisseria cinerea ATCC 14685] gi|269144693|gb|EEZ71111.1| peptide chain release factor 1 [Neisseria cinerea ATCC 14685] Length = 358 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 122/349 (34%), Positives = 176/349 (50%), Gaps = 8/349 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + RL + P ++ + L RE L + + Q D Sbjct: 4 SILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQSDLA 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E+ + + E + + Q L D + ++EV AG GG E Sbjct: 64 DAEEMLSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEVRAGTGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY+R+AE+ +++ E + ++ E G K I G AY LK E G HR Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ V P D+ +IE++ +D RIDT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGDL++ A +A + Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQ 349 >gi|109946962|ref|YP_664190.1| peptide chain release factor 2 [Helicobacter acinonychis str. Sheeba] gi|123066315|sp|Q17YT5|RF2_HELAH RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|109714183|emb|CAJ99191.1| peptide chain release factor RF-2 [Helicobacter acinonychis str. Sheeba] Length = 363 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 174/352 (49%), Positives = 244/352 (69%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q+L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 13 LQNKCDNIALIIKPEKVKQKLERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L +++ L E+A ++D L + ++ V+ + E +LSGE D+++A + + Sbjct: 73 KNALDESVELFEIAQNDNDEVTLSLLYEEAPILEHGVQKVEIEIMLSGEHDASNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 193 NESGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSTAKN--EE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+NI ++ +LDGD+D ++ L K Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362 >gi|289423341|ref|ZP_06425149.1| peptide chain release factor 2 [Peptostreptococcus anaerobius 653-L] gi|289156272|gb|EFD04929.1| peptide chain release factor 2 [Peptostreptococcus anaerobius 653-L] Length = 350 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 167/346 (48%), Positives = 227/346 (65%), Gaps = 4/346 (1%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 LFD D+ R + +N ED W++ A +++E + L + I + +L D +L Sbjct: 3 LFDLDSLKTRQADINASMEDQGFWEDSDHANRILQENKQLTSKIEDYDSLVGQLEDISVL 62 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGT 128 +E+A E D + D L +V K E L SGE DSN+A L +++G GG Sbjct: 63 IEMAEETSDSEEDKTIEDQLVAYISDVNEKIVNTTMELLFSGEYDSNNAILSINSGTGGL 122 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 ++QDWA MLLRMY RW+E R K + L+I EAGIK+A+L++ G NAYG+LK E+GVH Sbjct: 123 DAQDWAQMLLRMYIRWSEGRGLKVKLLDIISDPEAGIKTASLMVSGVNAYGYLKSEKGVH 182 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVRISP+DS+ +RHTSF+S+ V P ++D +I I+ +D +IDTYR+SGAGGQHVNTTDS Sbjct: 183 RLVRISPFDSSGKRHTSFASVDVLPEIEDDSDININPNDLKIDTYRSSGAGGQHVNTTDS 242 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PTG+VVQCQ ERSQ NK A ML +KL +++ ++ +E + T+I W Sbjct: 243 AVRITHLPTGIVVQCQNERSQRINKDVAMKMLISKLIQIKEEENKEKIEDLQGKYTQISW 302 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 G QIRSYV QPY++VKD RTN E T+ V+DG LDDFM L + Sbjct: 303 GSQIRSYVFQPYKLVKDHRTNKENTNVDAVMDGSLDDFMFEYLKKQ 348 >gi|241888662|ref|ZP_04775969.1| peptide chain release factor 2 [Gemella haemolysans ATCC 10379] gi|241864685|gb|EER69060.1| peptide chain release factor 2 [Gemella haemolysans ATCC 10379] Length = 372 Score = 242 bits (618), Expect = 5e-62, Method: Composition-based stats. Identities = 156/351 (44%), Positives = 224/351 (63%), Gaps = 1/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++++++ ++ +R++ + + W + A +L+ E + + + E Sbjct: 12 EINKRITEFKTSLKIEDKTERVAEIENMMLEADFWNDSEAASLLVTESKSIKKELDEFSE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D L + ++E +EDD I Q+ + + +K VE F L S E D+N A LE+ Sbjct: 72 MIDYLEHSEEMVEFLKDEDDEEIYQDLLETVVNLKNSVEDFSFRLLFSEEYDNNTAILEI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGT++ DW+ ++LRMY R+ K+ K L G+ G+KSAT+ I+G AYG L Sbjct: 132 HAGAGGTDATDWSELMLRMYERFFTKQGLKYSYLNYQSGDITGVKSATIKIEGDFAYGLL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGG 240 KGE+GVHR+VRISP+D + +RHTSF+SI V P DD I IEI+ D +IDTYRA GAGG Sbjct: 192 KGEKGVHRVVRISPFDPSGKRHTSFASIDVIPEFNDDEINIEINNEDLKIDTYRAQGAGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QH+NTTDSAVRITH+PTG+VVQ Q ERSQ KNK A L++KLY+LE++++E+ Sbjct: 252 QHINTTDSAVRITHLPTGIVVQSQAERSQIKNKDAAMKNLKSKLYQLEIEEKEKELAAIR 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + +IGWG QIRSYV PY MVKD RTN E ++ V+DG++ DF+ A L Sbjct: 312 GEQKDIGWGSQIRSYVFTPYTMVKDHRTNYEVSTVDKVMDGEIIDFIDAYL 362 >gi|189499218|ref|YP_001958688.1| peptide chain release factor 2 [Chlorobium phaeobacteroides BS1] gi|189494659|gb|ACE03207.1| peptide chain release factor 2 [Chlorobium phaeobacteroides BS1] Length = 363 Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats. Identities = 154/349 (44%), Positives = 227/349 (65%), Gaps = 1/349 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + LN GG+FD D + ++ L T + + W+N EA +++E ++ Sbjct: 12 TTALNSYGGIFDVDERLHKIGELEQITTEENFWENQQEANKIVKEINDHKLWTEGFLALE 71 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D LE+A E + S+ +E + I+ ++ +F+++LSG+ D +A L ++A Sbjct: 72 KQTADLREELEIAEELGEESLAEEIDSRIGSIEQKIAEIEFKNMLSGKDDPGNALLTINA 131 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+QDWA ML RMY RWAE++ FK + +G+ AGIK+ATL I+GP AYG+LK Sbjct: 132 GAGGTEAQDWAEMLYRMYLRWAERKGFKIFTDDYQEGDGAGIKTATLEIQGPYAYGYLKA 191 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR+SP+DSN+RRHTSF+S++ YP EIEI + D + T+R+ G GGQ+V Sbjct: 192 ENGVHRLVRVSPFDSNARRHTSFASVYSYPEAPPDAEIEIRKEDLELSTFRSGGKGGQNV 251 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N ++AVRI HIP+G+VV CQQERSQ +N+ +A MLRA+LY+ + ++ E E +K Sbjct: 252 NKVETAVRIKHIPSGIVVSCQQERSQFQNRERATKMLRAQLYKKQREEEEARKQAVEGTK 311 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +I WG QIRSYV+ + +KD RTN E+ +VLDGD+DDF++ L+ Sbjct: 312 KKIEWGSQIRSYVMDD-RRIKDHRTNYERHDIENVLDGDIDDFIEKYLS 359 >gi|241664381|ref|YP_002982741.1| peptide chain release factor 1 [Ralstonia pickettii 12D] gi|240866408|gb|ACS64069.1| peptide chain release factor 1 [Ralstonia pickettii 12D] Length = 360 Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats. Identities = 119/344 (34%), Positives = 183/344 (53%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +R+ +N N+ + + L RE L+ ++ + D EL Sbjct: 9 LDQLAERIVEINALLAREDATANLDQYRKLTREHAELEPVVAQFAAWKRAEEDIATAQEL 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 A + D + ++ +R++ Q L D + ++E+ AG GG ES +A Sbjct: 69 AADPDMKAFGEDELRAARERMESLEGELQRLLLPKNPNDHRNIFVEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE+++++ E + + G K + G AY LK E G HR+ R+ Sbjct: 129 GDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ + P D +I+I+ +D RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 189 ATEAQGRIHTSACTVAIMPEADALADIQINPADLRIDTFRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQH+NK +A +L A+L + Q+RE A + K+ IG G + Sbjct: 249 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKD--RQEREAQAKEASARKSLIGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ ++DGDLD+ + A A + Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKIDAIMDGDLDELVGALAAEHQ 349 >gi|307636860|gb|ADN79310.1| hypothetical protein hp908_0179 [Helicobacter pylori 908] gi|325995449|gb|ADZ50854.1| Peptide chain release factor 2 [Helicobacter pylori 2018] gi|325997047|gb|ADZ49255.1| Peptide chain release factor 2 [Helicobacter pylori 2017] Length = 363 Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats. Identities = 175/352 (49%), Positives = 243/352 (69%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 13 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L +++ L ELA ++D L + ++ V+ + E +LSGE D+++A + + Sbjct: 73 KNSLDESVELFELAQNDNDEVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+NI ++ +LDGD+D ++ L K Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362 >gi|7388055|sp|P74476|RF2_SYNY3 RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 372 Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats. Identities = 145/351 (41%), Positives = 219/351 (62%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +S +L D ++ L P W + +A+ +++ + + Sbjct: 15 ISSRLGQTQDYLDLPGLKAKVQDLEQCAAQPDFWDDTDQAQQILQTLNETKSQLEQWGIW 74 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 Q + D+ ++EL EDD ++L E L++++ E++ + + LLSG D+ A L ++ Sbjct: 75 QQQWQDSQAIVELLELEDDQALLTEAETTLEQLQKELDRWELQQLLSGPYDAKGATLTIN 134 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGT++QDWA MLLRMYTRW+EK+ +K EI +G+EAG+KS TL I+G AYG+LK Sbjct: 135 AGAGGTDAQDWAEMLLRMYTRWSEKQGYKVHLAEISEGDEAGLKSVTLEIEGRYAYGYLK 194 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241 E+G HRLVRISP+++N +R TSF+ + V P+ +++I ++I + D I T RA G GGQ Sbjct: 195 SEKGTHRLVRISPFNANGKRQTSFAGVEVMPLLGEEAISLDIPDKDLDISTSRAGGKGGQ 254 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN ++AVRI H+PTG+ V+C QERSQ +NK +A +L+AKL + ++R + Sbjct: 255 NVNKVETAVRIVHLPTGLAVRCTQERSQLQNKEKALAILKAKLLIVLEEQRAQAIAEIRG 314 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E WG QIR+YV PYQ+VKDLRTN+E T V+DG+L DF++A L Sbjct: 315 DMVEAAWGTQIRNYVFHPYQLVKDLRTNVETTDVGGVMDGELSDFIEAYLR 365 >gi|262370876|ref|ZP_06064200.1| peptide chain release factor 2 [Acinetobacter johnsonii SH046] gi|262314238|gb|EEY95281.1| peptide chain release factor 2 [Acinetobacter johnsonii SH046] Length = 310 Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats. Identities = 168/307 (54%), Positives = 220/307 (71%), Gaps = 1/307 (0%) Query: 47 RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106 +E+ L+N ++ + + +L D +L+LA+E DD S+L + L + E+ +F Sbjct: 3 KEKGELENVLNVLDGLATQLEDAQAMLDLAVEADDESLLADVQAELTSAEEELAKLEFRR 62 Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S D N Y+E+ AG+GGTE+QDWA+MLLRMY RW E+ FK E +E DG+ AGIK Sbjct: 63 MFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEESDGDVAGIK 122 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ ++G AYGWL+ E GVHRLVR SP+DS +RRHTSFS+++V P VDD+IEI+I+ S Sbjct: 123 SATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFVSPEVDDNIEIDINPS 182 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D R DTYRASGAGGQH+N TDSAVR+TH PTG+VV CQ +RSQH N+ AW LRAKLYE Sbjct: 183 DVRTDTYRASGAGGQHINKTDSAVRLTHAPTGIVVACQNQRSQHANRDHAWKQLRAKLYE 242 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LE+ KR E A E SK++IGWG QIRSYVL +KDLRT +E ++ VLDGDLD F Sbjct: 243 LEMSKRNEAAQALEDSKSDIGWGSQIRSYVLDD-SRIKDLRTGVENSNTGAVLDGDLDKF 301 Query: 347 MKATLAI 353 ++A+L Sbjct: 302 IEASLKQ 308 >gi|258645336|ref|ZP_05732805.1| peptide chain release factor 2 [Dialister invisus DSM 15470] gi|260402685|gb|EEW96232.1| peptide chain release factor 2 [Dialister invisus DSM 15470] Length = 330 Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 159/326 (48%), Positives = 215/326 (65%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W+N AK + ++ A + R LL++A+EE+D + E Sbjct: 1 MSDPSFWENGDHAKEISQKATEAKAAYDTYTRLFARAESIKELLDMAIEENDQDMEGELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + +K ++ K+ E LL+ E D+NDA + HAGAGGTE+QDW ML+RMY +WAE Sbjct: 61 EEINELKDILDKKEIELLLNDEYDANDAIITFHAGAGGTEAQDWTEMLIRMYIKWAESEG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L + G+EAG+KSA +++G AYG LK E+GVHRLVRISP+D+ RRHTSFS++ Sbjct: 121 FVLEELNMLPGDEAGVKSAEYMVRGKFAYGLLKSEKGVHRLVRISPFDAAKRRHTSFSAV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + D IEI+++ +D R+D YRASGAGGQH+N T SAVR+THIPTG+V CQ ERSQ Sbjct: 181 DVMPEIGDDIEIDLNMADVRVDYYRASGAGGQHINKTSSAVRMTHIPTGIVAACQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK Q +L+AKL+ELE+QKRE++ E + I WG QIRSYV QPY +VKD RT Sbjct: 241 FQNKEQCLRLLKAKLFELEMQKREQVKKGIEGEQQAIEWGSQIRSYVFQPYTLVKDNRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355 IE + V+DG L+ F++ L KK Sbjct: 301 IETGNIQSVMDGGLNPFIEGFLKHKK 326 >gi|254671653|emb|CBA09383.1| peptide chain release factor 1 [Neisseria meningitidis alpha153] Length = 372 Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 121/349 (34%), Positives = 174/349 (49%), Gaps = 8/349 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + RL + P ++ + L RE L + + + D Sbjct: 18 SILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQSDLA 77 Query: 71 ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E+ + + E + + Q L D + ++EV AG GG E Sbjct: 78 DAEEMLSDPEMKDFAAEEIEAAKAKIGALDTELQKLLLPKDADDDKNIFIEVRAGTGGDE 137 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY+R+AE+ +++ E + ++ E G K I G AY LK E G HR Sbjct: 138 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHR 197 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ V P D+ +IE++ D RIDT+RASGAGGQH+N TDSA Sbjct: 198 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDTFRASGAGGQHINKTDSA 257 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G Sbjct: 258 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 315 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGDL + A +A + Sbjct: 316 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQ 363 >gi|253580116|ref|ZP_04857383.1| peptide chain release factor 1 [Ruminococcus sp. 5_1_39B_FAA] gi|251848635|gb|EES76598.1| peptide chain release factor 1 [Ruminococcus sp. 5_1_39BFAA] Length = 358 Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 121/351 (34%), Positives = 192/351 (54%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D+ + R + + +P + N + LM+E+ L + +E + Sbjct: 1 MFDKLDDLLIRFEEVLNELGEPGVTDNQEHFQKLMKEQSDLQPIVDAYREYKKNKETIQD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127 L + EE D + + + L K VE + E D+ + +E+ AGAGG Sbjct: 61 SLSMLEEEKDEDMREMLKEELSEAKKNVEELEHELKILLLPKDPNDNKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY ++AE R++KTE + +++ G K T +I G AY LK E GV Sbjct: 121 DEAALFAAEIYRMYVKYAESRRWKTEMMSLNENGIGGFKEVTFMITGAGAYSRLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ + P + I+ + +DC+ D +RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTCTVAIMP-EAEEIDFHLDMNDCKFDVFRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V+ CQ E+SQ KNK +A +LR++LYE+EL K+ + E+ +++IG Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYEMELAKQHD--AEAEARRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +VL+GDLD+ + + +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHRLENVLNGDLDEIIDSLIAADQ 347 >gi|167759398|ref|ZP_02431525.1| hypothetical protein CLOSCI_01745 [Clostridium scindens ATCC 35704] gi|167662955|gb|EDS07085.1| hypothetical protein CLOSCI_01745 [Clostridium scindens ATCC 35704] Length = 356 Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 121/351 (34%), Positives = 193/351 (54%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ + RL + ++ ++P++ + + LM+E+ L + KE + Sbjct: 1 MFDKLEDLLIRLEEVLSELQEPNVANDQNRFRKLMKEQNELTPIVEAYKEYKACKQAIED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127 L++ EE D + + + L K VE + E D + +E+ AGAGG Sbjct: 61 SLQMLEEESDEEMRELAKEELNDSKARVEELEHELKILLLPKDPNDDKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY +AE R++K E +E + G+K+ T +I G AY +K E GV Sbjct: 121 DEAALFAAEIYRMYLHYAESRRWKVELVECEEIGIGGMKNVTFMINGKGAYSVMKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P + ++I+I E D RID RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMP-EAEDVDIQIDEKDIRIDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+V+ Q E+SQ +NK +A+ +LRAKLY++E QKR + E+ K++IG Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFALLRAKLYDMECQKRHD--AEAEARKSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++GD+ + + A +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIGLTLYKLDKIMNGDIQEIIDACIAADQ 347 >gi|251780395|ref|ZP_04823315.1| peptide chain release factor 2 [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084710|gb|EES50600.1| peptide chain release factor 2 [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 325 Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 154/326 (47%), Positives = 220/326 (67%), Gaps = 1/326 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++ W + A+ + +E + + + I ++ +Q +L D +L E+ ++D+ S + Sbjct: 1 MQEDGFWNDTKRAEEITKESKRIKDKIQRVESVQSKLDDIEVLKEMMDDDDEESAYE-II 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +N++ I+ E++ E LLSGE D N+A L +H G GGT++ DW MLLRMYTRW EK+ Sbjct: 60 NNIKEIEEEIDNYNMEILLSGEYDKNNAILTLHVGVGGTDANDWTEMLLRMYTRWCEKKN 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K E +++ +G+EAGIKS TL + G AYG+LK E+G+HRLVRISP+++N +R TSF+S+ Sbjct: 120 YKVEVIDLLEGDEAGIKSVTLKVIGEYAYGYLKAEKGIHRLVRISPFNANGKRQTSFASM 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + +I+I D ++DTYRASGAGGQH+N TDSAVRITHIPTGVVVQCQ ERSQ Sbjct: 180 EVLPELTKEQDIDIRSEDIKVDTYRASGAGGQHINKTDSAVRITHIPTGVVVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 NK A ML+AKL EL+ + +E ++GWG QIRSYV PY +VKD RTN Sbjct: 240 FSNKDTAMGMLKAKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTN 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355 +E ++ + V+DGDLD F+ + L K Sbjct: 300 VEVSNVTAVMDGDLDLFINSYLKSSK 325 >gi|197294594|ref|YP_001799135.1| Protein chain release factor B [Candidatus Phytoplasma australiense] gi|171853921|emb|CAM11884.1| Protein chain release factor B [Candidatus Phytoplasma australiense] Length = 370 Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 154/350 (44%), Positives = 224/350 (64%), Gaps = 3/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +++ L L + + Q L+ +N + W + +A ++ L I+ +K + Sbjct: 13 IAQNLRDLKEAINLSQSYQTLNQINELMQKKDFWDDPKKAVATSQKFNDLQEKINTLKHL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D + L LE + + + ++++ V + + L+ D+N+A L H Sbjct: 73 ETNHQDLVT--FLDLESNQNNETAFLEEEIKKLIDAVLNFKIKVFLNQPYDNNNAILIFH 130 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDW ML RMY ++A+K+ FKTE L+ GEEAGIKSATLL+KG AYG+LK Sbjct: 131 PGAGGTESQDWCEMLFRMYQKYAQKKNFKTEILDYQSGEEAGIKSATLLVKGAYAYGYLK 190 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVR+SP+D+N++RHTSF S V P + + I+I++ + D + D +R+SGAGGQH Sbjct: 191 AEKGVHRLVRVSPFDTNAKRHTSFVSCDVLPEIKEKIKIDLRQEDLKFDFFRSSGAGGQH 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGES 301 VNTTDSAVRITH+PTG+VV CQ ERSQ++N+ +A ML+ KL++L +K++E A + Sbjct: 251 VNTTDSAVRITHLPTGLVVSCQNERSQNQNREKALQMLKIKLFQLADKKQKEEHAKNFQG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + EIGWG QIRSYV PY+MVKD RTN E V+DG++D F+ L Sbjct: 311 EQKEIGWGSQIRSYVFHPYKMVKDHRTNQEIFQLEQVMDGNIDVFINGYL 360 >gi|153938890|ref|YP_001389537.1| peptide chain release factor 2 [Clostridium botulinum F str. Langeland] gi|152934786|gb|ABS40284.1| peptide chain release factor 2 [Clostridium botulinum F str. Langeland] gi|295317635|gb|ADF98012.1| peptide chain release factor 2 [Clostridium botulinum F str. 230613] Length = 325 Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 147/323 (45%), Positives = 216/323 (66%), Gaps = 1/323 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++P+ W ++ EA+ + E ++L + ++ +++ + D + L E+ L E+D + +E Sbjct: 1 MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEM-LSEEDDDMKKEII 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + IK E + + E+LLSGE D N+ + +H+G GGT++QDW +ML RMYTRWAEK Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F + +++ + E+AGIKS TL I G YG+LK E+G+HRLVRISP+++N +R TSF+SI Sbjct: 120 FAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASI 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + P + D EIEI D +IDTYRA GAGGQHVN T+SAVRITH+PTG++VQCQ ERSQ Sbjct: 180 EILPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK A +L++KL EL+ + +E ++GWG QIRSYV PY +VKD RT Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKERIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E ++ V++GD++ F+ L Sbjct: 300 AETSNVDSVMNGDINMFITQYLK 322 >gi|108562592|ref|YP_626908.1| peptide chain release factor 2 [Helicobacter pylori HPAG1] gi|122386784|sp|Q1CUY8|RF2_HELPH RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|107836365|gb|ABF84234.1| peptide chain release factor RF-2 [Helicobacter pylori HPAG1] Length = 363 Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 175/352 (49%), Positives = 243/352 (69%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 13 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L +++ L ELA ++D L + ++ V+ + E +LSGE D+++A + + Sbjct: 73 KNSLDESVELFELAQNDNDEVTLSLLYEEAPTLEHSVQKVEIEIMLSGENDASNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+NI ++ +LDGD+D ++ L K Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362 >gi|170755895|ref|YP_001779801.1| peptide chain release factor 2 [Clostridium botulinum B1 str. Okra] gi|169121107|gb|ACA44943.1| peptide chain release factor 2 [Clostridium botulinum B1 str. Okra] Length = 325 Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 148/323 (45%), Positives = 217/323 (67%), Gaps = 1/323 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++P+ W ++ EA+ + E ++L + + +++ + D + L E+ L E+D + +E Sbjct: 1 MQNPNFWNDIKEAQKITSEEKYLKDKLIKYNHLRNTIEDIISLCEM-LSEEDDDMKKEII 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + IK E++ + E+LLSGE D N+ + +H+G GGT++QDW +ML RMYTRWAEK Sbjct: 60 SEYKNIKEEIDKFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F + +++ + E+AGIKS TL I G YG+LKGE+G+HRLVRISP+++N +R TSF+SI Sbjct: 120 FTIKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASI 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + P + + EIEI D +IDTYRA GAGGQHVN T+SAVRITHIPTG++VQCQ ERSQ Sbjct: 180 EILPELTEDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK A +L++KL EL+ + +E ++GWG QIRSYV PY +VKD RT Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E ++ V++GD++ F+ L Sbjct: 300 AETSNVDSVMNGDINIFITQYLK 322 >gi|58039738|ref|YP_191702.1| peptide chain release factor 2 [Gluconobacter oxydans 621H] gi|58002152|gb|AAW61046.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Gluconobacter oxydans 621H] Length = 322 Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 199/308 (64%), Positives = 245/308 (79%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRER L N I ++ I+ + L L+ELA E D S++Q+ L+ I +V ++ E Sbjct: 1 MRERTTLANQIEGVQRIESEVEGTLELVELAEMEGDESLVQDAVQTLRAIAEDVRKREIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEADSND Y+EV+AGAGGTE+QDWA MLLRMYTRWAE+ +K +E +GE+AGI Sbjct: 61 SLLSGEADSNDCYVEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTFIEGSEGEQAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ + GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPVVDDSIEI+I++ Sbjct: 121 KSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVVDDSIEIDIND 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R+DT+RASGAGGQHVN TDSA+RITHIPTG+VV CQ +RSQH+N+A+A MLRA++Y Sbjct: 181 SDLRVDTFRASGAGGQHVNKTDSAIRITHIPTGIVVACQTDRSQHRNRAKAMEMLRARMY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E ELQKRE A E+SKT+IGWG QIRSYVL PYQ+VKDLRT +EK +P VLDG LDD Sbjct: 241 EAELQKREAAAAQTEASKTDIGWGHQIRSYVLAPYQLVKDLRTGVEKGNPGAVLDGALDD 300 Query: 346 FMKATLAI 353 FM A+LA Sbjct: 301 FMSASLAQ 308 >gi|309782949|ref|ZP_07677669.1| peptide chain release factor 1 [Ralstonia sp. 5_7_47FAA] gi|308918373|gb|EFP64050.1| peptide chain release factor 1 [Ralstonia sp. 5_7_47FAA] Length = 360 Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 117/344 (34%), Positives = 183/344 (53%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +R+ +N N+ + + L RE L+ ++ + D EL Sbjct: 9 LDQLAERIVEINALLAREDATANLDQYRKLTREHAELEPVVAQFAAWKQAEEDIATAQEL 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 A + D + ++ +R++ Q L D + ++E+ AG GG ES +A Sbjct: 69 AADPDMKAFAEDELRAARERMESLEGELQRLLLPKDPNDHRNIFVEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE+++++ E + + G K + G AY LK E G HR+ R+ Sbjct: 129 GDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ + P D +I+I+ +D RIDT+RASGAGGQH+N T+SAVRITH Sbjct: 189 ATEAQGRIHTSACTVAIMPEADALADIQINPADLRIDTFRASGAGGQHINKTESAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQH+NK +A +L A+L + Q+RE A + K+ IG G + Sbjct: 249 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKD--RQEREAQAKEASARKSLIGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ ++DGD+D+ + A A + Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKIDAIMDGDIDELVGALAAEHQ 349 >gi|262280476|ref|ZP_06058260.1| peptide chain release factor 2 [Acinetobacter calcoaceticus RUH2202] gi|262258254|gb|EEY76988.1| peptide chain release factor 2 [Acinetobacter calcoaceticus RUH2202] Length = 310 Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 168/307 (54%), Positives = 223/307 (72%), Gaps = 1/307 (0%) Query: 47 RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106 +E+ L+N I+ + + +L D +L+LA+E DD S+L++ L + E+ +F Sbjct: 3 KEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELGAAEDELAKLEFRR 62 Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S D N Y+E+ +G+GGTE+QDWA+MLLRMY RW E+ FK E +E+ DG+ AGIK Sbjct: 63 MFSNPMDPNPCYVEIQSGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAGIK 122 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ ++G AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+ S Sbjct: 123 SATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDINPS 182 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D R DTYRASGAGGQH+N TDSAVR+TH PTG+VV CQ +RSQH N+ AW LRAKLYE Sbjct: 183 DVRTDTYRASGAGGQHINKTDSAVRLTHTPTGIVVACQNQRSQHANRDHAWKQLRAKLYE 242 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LE+QKR E A E SK++IGWG QIRSYVL +KDLRT +E ++ VLDGDLD F Sbjct: 243 LEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDD-SRIKDLRTGVENSNTGAVLDGDLDRF 301 Query: 347 MKATLAI 353 ++A+L Sbjct: 302 IEASLKQ 308 >gi|254778885|ref|YP_003056990.1| peptide chain release factor 2 [Helicobacter pylori B38] gi|254000796|emb|CAX28720.1| Peptide chain release factor 2 (RF-2) [Helicobacter pylori B38] Length = 363 Score = 242 bits (617), Expect = 6e-62, Method: Composition-based stats. Identities = 176/352 (50%), Positives = 243/352 (69%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 13 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 +D L +++ L ELA ++D L + ++ V+ + E +LSGE D+++A + + Sbjct: 73 KDSLDESVELFELAQNDNDEVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+NI ++ +LDGD+D ++ L K Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362 >gi|15644800|ref|NP_206970.1| peptide chain release factor 2 [Helicobacter pylori 26695] gi|2500142|sp|P55999|RF2_HELPY RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|2313254|gb|AAD07236.1| peptide chain release factor RF-2 (prfB) [Helicobacter pylori 26695] Length = 363 Score = 242 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 173/352 (49%), Positives = 242/352 (68%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 13 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L +++ L ELA ++D L + ++ V+ + E +LSGE D+++A + + Sbjct: 73 KNSLDESVELFELAQNDNDEVTLSLLYEEAPILENSVQKVEIEIMLSGENDASNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YR+SGAGGQH Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRSSGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362 >gi|208434124|ref|YP_002265790.1| peptide chain release factor RF-2 [Helicobacter pylori G27] gi|238054481|sp|B5Z9U4|RF2_HELPG RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|208432053|gb|ACI26924.1| peptide chain release factor RF-2 [Helicobacter pylori G27] Length = 363 Score = 242 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 175/352 (49%), Positives = 244/352 (69%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 13 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L +++ L ELA ++D + L + ++ V+ + E +LSGE D+++A + + Sbjct: 73 KNSLDESVELFELAQNDNDETTLSLLYEEAPTLEHSVQKVEIEIMLSGENDASNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+NI ++ +LDGD+D ++ L K Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362 >gi|319637760|ref|ZP_07992526.1| peptide chain release factor 1 [Neisseria mucosa C102] gi|317400915|gb|EFV81570.1| peptide chain release factor 1 [Neisseria mucosa C102] Length = 358 Score = 242 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 122/349 (34%), Positives = 176/349 (50%), Gaps = 8/349 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + RL + P ++ + L RE L + + Q D Sbjct: 4 SILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQSDLA 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E+ + + E + + Q L D + ++EV AG GG E Sbjct: 64 DAEEMLSDPEMKDFAAEEIEAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY+R+AE+ +++ E + ++ E G K I G AY LK E G HR Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ V P D+ +IE++ +D RIDT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGDL++ A +A + Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQ 349 >gi|211938843|pdb|2JL5|Y Chain Y, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome (Part 1 Of 4). This File Contains The 30s Subunit. gi|211938901|pdb|2JL7|Y Chain Y, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome (Part 3 Of 4). This File Contains The 30s Subunit. gi|237823553|pdb|2WH1|Y Chain Y, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome gi|237823612|pdb|2WH3|Y Chain Y, Insights Into Translational Termination From The Structure Of Rf2 Bound To The Ribosome). This File Contains The 30s Subunit Length = 351 Score = 242 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 153/352 (43%), Positives = 208/352 (59%), Gaps = 5/352 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+++L L G D RL L + EDP LW + A+ + +E L + + + Sbjct: 1 LAQRLEGLRGYLDIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRSL 60 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L L L+E E+ + L+ +++ ++LL+ +A L + Sbjct: 61 ESDLQGLLELMEELPAEEREA----LKPELEEAAKKLDELYHQTLLNFPHAEKNAILTIQ 116 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTE+ DWA MLLRMYTR+AE++ F+ E +++ G EAGI A +L+KG NAYG L Sbjct: 117 PGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLLS 176 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR SP+D++ RRHTSF+ + V P VD+ +E+ + + RID RASG GGQ Sbjct: 177 PEAGVHRLVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQG 236 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+ H+PTG+ V CQ RSQ KNK A +L+A+LYELE +KREE Sbjct: 237 VNTTDSAVRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRGE 296 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 I WG QIRSYVL VKD RT + + P +VLDGDL D + A L K Sbjct: 297 VEPIEWGSQIRSYVLDK-NYVKDHRTGLMRHDPENVLDGDLMDLIWAGLEWK 347 >gi|261867616|ref|YP_003255538.1| peptide chain release factor 1 [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412948|gb|ACX82319.1| peptide chain release factor 1 [Aggregatibacter actinomycetemcomitans D11S-1] Length = 360 Score = 242 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 116/344 (33%), Positives = 182/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ +R L D + + + + +E L++ + + L Sbjct: 9 LDSLKERYEELEALLGDASVISDQDKFRAYSKEYAQLEDVVKSFNRWNQLNSNLEEAQLL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q + + +VE Q L D + YLE+ AG GG E+ +A Sbjct: 69 LDDPEMKEMAQMEIEESKAELEQVEQHLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE ++++ E L ++ E+ G K L+ G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAETKRWRVEVLSENESEQGGFKEIIALVSGDGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ +D RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 189 KTESQGRIHTSACTVAVMPELLESEMPEINPADLRIDTYRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A ++L ++L + E +K + ++ + +G G + Sbjct: 249 IPTGMVVECQDERSQHKNKAKALSVLASRLVQQEQEKLAQEQ--ADTRRNLLGSGDRSDK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +V++G +DD ++ + + Sbjct: 307 IRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDDLIQPIITEYQ 349 >gi|308182345|ref|YP_003926472.1| peptide chain release factor 2 [Helicobacter pylori PeCan4] gi|308064530|gb|ADO06422.1| peptide chain release factor 2 [Helicobacter pylori PeCan4] Length = 363 Score = 242 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 175/352 (49%), Positives = 243/352 (69%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 13 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L +++ L ELA ++D L + ++ V+ + E +LSGE D+++A + + Sbjct: 73 KNSLDESIELFELAQNDNDEVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+NI ++ +LDGD+D ++ L K Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362 >gi|223982761|ref|ZP_03632989.1| hypothetical protein HOLDEFILI_00263 [Holdemania filiformis DSM 12042] gi|223965261|gb|EEF69545.1| hypothetical protein HOLDEFILI_00263 [Holdemania filiformis DSM 12042] Length = 327 Score = 242 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 149/325 (45%), Positives = 204/325 (62%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 + H W + A+ ++R+ + + +++ L ++ + D + + Sbjct: 1 MNEEHFWDDPKAAQNVIRQCNGMKELEAKYHQMEQSLASLQETVDELNQNFDEELKELLD 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 Q + E + LLS D N+A LE+H GAGGTESQDWA+ML RMY RWAE++ Sbjct: 61 MEYQDTLNQFEDFEVMVLLSHPYDKNNAILELHPGAGGTESQDWASMLYRMYCRWAERKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K L+ +GEEAGIKS ++LI+G AYG+LK E+GVHRLVRISP+DS+ RRHTSF+S+ Sbjct: 121 YKVTLLDYQEGEEAGIKSVSILIEGDMAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASL 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P D IEI I E D + T RASGAGGQH+N TDSAVR+TH PTG+VV CQ ERSQ Sbjct: 181 DVMPQFSDEIEITIDERDLDVVTMRASGAGGQHINKTDSAVRMTHKPTGIVVSCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ + NML++KLY+ ++++E + I WG QIRSYV PY MVKD RT Sbjct: 241 IQNRERCMNMLKSKLYQRMIEEQEAKLAAIRGEQKNIEWGSQIRSYVFCPYTMVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E S +V+DGDLD F+ + L + Sbjct: 301 YEMGSVQNVMDGDLDGFIFSYLKSQ 325 >gi|52425247|ref|YP_088384.1| peptide chain release factor 1 [Mannheimia succiniciproducens MBEL55E] gi|61214602|sp|Q65TB1|RF1_MANSM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|52307299|gb|AAU37799.1| PrfA protein [Mannheimia succiniciproducens MBEL55E] Length = 360 Score = 242 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 118/344 (34%), Positives = 180/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ +R L D + + + + +E L+ + + + L Sbjct: 9 LDSLNERYEELEALLGDASVISDQDKFRAYSKEYSQLEEVVKTFSRWKQLNSNIEEAELL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q + + EVE Q L D +AYLE+ AG GG E+ +A Sbjct: 69 LDDPEMKEMAQMEIEESKNELEEVEQHLQILLLPRDPNDEYNAYLEIRAGTGGDEAGIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE ++++ E L ++ E+ G K L+ G N YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEMKRWRVEVLSENESEQGGYKEIIALVSGDNVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ +D RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A +L ++L + E K + + +G G + Sbjct: 249 IPTGMVVECQDERSQHKNKAKALAVLASRLVQAEQDKLAAEQ--ATTRRNLLGSGDRSDK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +V++G +D+ ++ + + Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 349 >gi|39938959|ref|NP_950725.1| protein chain release factor B [Onion yellows phytoplasma OY-M] gi|39722068|dbj|BAD04558.1| protein chain release factor B [Onion yellows phytoplasma OY-M] Length = 369 Score = 242 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 160/350 (45%), Positives = 218/350 (62%), Gaps = 3/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + L L D Q + LN + W+ +A + ++ L + + ++ + Sbjct: 13 LHQNLQDLKQALDIKKTNQTIEKLNYAMQKEDFWKYPQKAVTISQQFNDLQDKKTTLETL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L L + S L + L+ + V + + L+ D N+A L H Sbjct: 73 KQNYLDLETLFNLNESPNKTSAL--LEEELKNLTKAVFDFKIKIFLNQSYDINNAILLFH 130 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDW ML RMY ++A+K+ FKTE L+ GE AGIKSATLLIKG AYG+LK Sbjct: 131 PGAGGTESQDWCEMLFRMYQKYAQKKNFKTEILDYQPGEGAGIKSATLLIKGTYAYGYLK 190 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+D+NS+RHTSF + V P +++ I+I + D +ID +R+SGAGGQH Sbjct: 191 AEKGVHRLVRISPFDANSKRHTSFVACDVLPEINEEIKINLKTEDLKIDVFRSSGAGGQH 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGES 301 VNTTDSAVRITH+PTG+VV CQ ERSQ KNK +A ML+ KL++L +K++E A +S Sbjct: 251 VNTTDSAVRITHLPTGLVVGCQNERSQIKNKEKALQMLKTKLFQLASKKQKEENAKKFQS 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + E GWG QIRSYV PY+MVKD RTN E V+DG++D+F+ L Sbjct: 311 DQKENGWGSQIRSYVFHPYKMVKDHRTNQEIFQLEQVMDGNIDEFINGYL 360 >gi|94987335|ref|YP_595268.1| protein chain release factor B [Lawsonia intracellularis PHE/MN1-00] gi|94731584|emb|CAJ54947.1| Protein chain release factor B [Lawsonia intracellularis PHE/MN1-00] Length = 362 Score = 242 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 154/353 (43%), Positives = 210/353 (59%), Gaps = 8/353 (2%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + GG+FD + RLS + P W N +++E+ L+ +++ Sbjct: 1 MKFFGGVFDQPSYKNRLSEIEKILSAPDAWSNPEALTPILKEKSQLEADNLRFEKLHLCH 60 Query: 67 CDNLILLELALEE--------DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 + + EL E + L +++ + +E + LL E D DA Sbjct: 61 TEMIDWFELVQEFLTTNESSTEFLEALTALELQVKKFQDAMEEAEMYLLLGAEEDKMDAI 120 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 LE+H GAGGTE+QDWA ML RMY RWA+ F E ++ G+EAGIKS TL I G NAY Sbjct: 121 LEIHPGAGGTEAQDWAEMLERMYLRWADLHGFSKEEMDYLPGDEAGIKSVTLRISGENAY 180 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G LKGE+G+HRL+RISP+DS+ RRHTSF+S+ V P + + I+I +SD RID +R+SG Sbjct: 181 GLLKGERGIHRLIRISPFDSSGRRHTSFASVDVIPDAGEEVVIDIKDSDLRIDVFRSSGP 240 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTT SAVRITHIPTG+V QCQ E+SQH NK A +LRA+LYE E++ R+ Sbjct: 241 GGQSVNTTSSAVRITHIPTGIVAQCQNEKSQHHNKESAMRILRARLYEQEIKLRDAAKQA 300 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K I +G QIR+Y +QPY++VKD RTN E + VL G +D F+ + L Sbjct: 301 QYMGKEAISFGSQIRTYTMQPYRLVKDHRTNCESSDVEAVLGGQIDKFINSYL 353 >gi|225023585|ref|ZP_03712777.1| hypothetical protein EIKCOROL_00444 [Eikenella corrodens ATCC 23834] gi|224943680|gb|EEG24889.1| hypothetical protein EIKCOROL_00444 [Eikenella corrodens ATCC 23834] Length = 358 Score = 242 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 120/349 (34%), Positives = 181/349 (51%), Gaps = 8/349 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + D + +RL + P ++ + L +E L + ++ + D Sbjct: 4 SVLDKLQSLSERLEEVTALLSTPEATVDINRFRQLNQEHAELTPVVEAYRQYRQAESDLA 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 ++ + + E + + Q L E D + +LEV AG GG E Sbjct: 64 DAEDMLADPEMKDFAAEEIEAAKAKIETLDTELQKLLLPKDEDDGKNIFLEVRAGTGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMYTR+AE+ +++ E + ++ + G K I G AYG LK E G HR Sbjct: 124 AALFAADLLRMYTRYAERNRWQVEIVSANESDLGGYKEVIARIAGIGAYGRLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ V P D+ EI+++ ++ RIDT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEEIQLNPAELRIDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 +RITH+PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G Sbjct: 244 IRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDK--QKREAQAKEAAERKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGD+++ A +A + Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDMEEITNALIAEHQ 349 >gi|153956213|ref|YP_001396978.1| peptide chain release factor 2 [Clostridium kluyveri DSM 555] gi|219856538|ref|YP_002473660.1| hypothetical protein CKR_3195 [Clostridium kluyveri NBRC 12016] gi|146349071|gb|EDK35607.1| PrfB [Clostridium kluyveri DSM 555] gi|219570262|dbj|BAH08246.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 328 Score = 242 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 153/325 (47%), Positives = 219/325 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++P+ W ++ A+ + E ++L+ ++ + + D ILLE+ EE+D QE Sbjct: 1 MQEPNFWNDIDNAQKIASEEKNLEGRLNRYDLLSHNIEDARILLEIIKEEEDSMSFQEVM 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +++ I+ +VE + E LL GE D N+A L +H G GGT++QDW MLLRMY RWAEK Sbjct: 61 KDIKDIEFQVEIFRTEILLCGEYDKNNAILNLHVGVGGTDAQDWTEMLLRMYIRWAEKMG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K +++ + E+AGIKS +L I G AYG+LK E+G+HRLVRISP+++N +R TSF+S+ Sbjct: 121 YKVNIIDMLEAEDAGIKSVSLSIIGEFAYGYLKSEKGIHRLVRISPFNANGKRQTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + +IEI D ++DT+RA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ Sbjct: 181 EVLPELTGDQDIEIRSEDLKVDTFRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK QA +L+AKL EL+ + ++ ++GWG QIRSYV PY +VKD RT Sbjct: 241 HYNKEQALKILKAKLVELKERAHKDRIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E ++ S V+DGD+D+F+K L + Sbjct: 301 VESSNVSSVMDGDIDNFIKGYLKQQ 325 >gi|325263710|ref|ZP_08130443.1| peptide chain release factor 1 [Clostridium sp. D5] gi|324030748|gb|EGB92030.1| peptide chain release factor 1 [Clostridium sp. D5] Length = 357 Score = 242 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 116/351 (33%), Positives = 193/351 (54%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ + R + + ++P + + + + LM+E+ L+ + +E + + Sbjct: 1 MFDRLEDLLIRYEEVMGELQEPDVANDPVRFRKLMKEQSDLNPIVEAYREYKKSKQNIED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 L + EE D + + + L K VE + L D + +E+ AGAGG Sbjct: 61 SLAMLEEESDEEMREMAKEELNDSKARVEELEQELKILLLPKDPNDDKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY +AE R++K E + +++ G K +I G AY LK E GV Sbjct: 121 DEAALFAAEIYRMYVHYAEGRRWKVEMISLNENGIGGFKECVFMITGQGAYSRLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ + P + +++ I E D RID RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTITVAIMP-EAEEVDVVIEEKDIRIDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+V+ Q E+SQ +NK +A+ +LR+KL++LEL+K++ A+ E+ +++IG Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLFDLELEKQQ--ASEAEARRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L+GDLD+ + + +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDTILNGDLDEIIDSLIAADQ 347 >gi|238854884|ref|ZP_04645214.1| peptide chain release factor 2 [Lactobacillus jensenii 269-3] gi|260664171|ref|ZP_05865024.1| peptide chain release factor 2 [Lactobacillus jensenii SJ-7A-US] gi|282931596|ref|ZP_06337089.1| peptide chain release factor 2 [Lactobacillus jensenii 208-1] gi|313472385|ref|ZP_07812877.1| peptide chain release factor 2 [Lactobacillus jensenii 1153] gi|238832674|gb|EEQ24981.1| peptide chain release factor 2 [Lactobacillus jensenii 269-3] gi|239529755|gb|EEQ68756.1| peptide chain release factor 2 [Lactobacillus jensenii 1153] gi|260562057|gb|EEX28026.1| peptide chain release factor 2 [Lactobacillus jensenii SJ-7A-US] gi|281304207|gb|EFA96316.1| peptide chain release factor 2 [Lactobacillus jensenii 208-1] Length = 332 Score = 242 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 154/325 (47%), Positives = 208/325 (64%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W N A+ L+ L ++ D LEL EE D + E Sbjct: 1 MADPDFWNNQESAQKLISATNKLKEKRDHFNDLAQAFSDEEAALELLKEESDTDLQAEVE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +L+ +K + LLSG+ D+N+A +E+H GAGGTE+ DWA ML+RMY R++E Sbjct: 61 SDLESLKDSFHQYELNLLLSGKYDTNNALMEIHPGAGGTEAMDWAQMLMRMYQRFSEAHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E + G+EAG+KS ++LIKG NAYG LKGE GVHRLVRISP+D+ RRHTSF+S+ Sbjct: 121 FTFEIDDYEPGDEAGVKSVSVLIKGTNAYGLLKGEMGVHRLVRISPFDAAKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DDSIE++I+ +D RID +R+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ Sbjct: 181 EVIPEIDDSIEVDINPADLRIDVFRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK A N LRAKL++LE +K+ + + + +I WG QIRSYV PY MVKD RTN Sbjct: 241 FQNKETAMNALRAKLFQLEEEKKRKEKEKLKGVQQDIAWGSQIRSYVFHPYSMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E + + V+DG LD+ + + L + Sbjct: 301 FETSDVNGVMDGKLDNLIYSFLQWR 325 >gi|297379396|gb|ADI34283.1| peptide chain release factor 2 [Helicobacter pylori v225d] Length = 363 Score = 242 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 174/352 (49%), Positives = 242/352 (68%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 13 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L ++ L ELA ++D L + ++ V+ + E +LSGE D+++A + + Sbjct: 73 KNSLDESTELFELAQNDNDEVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSTAKN--EE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+N ++ +LDGD+D +++ L K Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILESVLIAK 362 >gi|326389251|ref|ZP_08210819.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus JW 200] gi|325994614|gb|EGD53038.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus JW 200] Length = 356 Score = 242 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 121/346 (34%), Positives = 193/346 (55%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL---IL 72 R L+ K DP++ NV E + ++E +++ + +E + L D L Sbjct: 5 LQAIEDRYVELSQKISDPNIISNVNEWRKYVKEHAAIEDIVLKYREYKKVLEDIEATKEL 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L EE +E S ++ + +E + + D + +E+ AGAGG E+ Sbjct: 65 LSSNDEELKEMAEEELSQLEEKKEKLLEEIKILLIPKDPNDEKNVIMEIRAGAGGEEAAL 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A+ L RMY+ +AEK+ +K E + ++ + G K L I G AY LK E GVHR+ R Sbjct: 125 FAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGAYSRLKYESGVHRVQR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ V P + +++EI+ +D ++D +R+ G GGQ VNTTDSAVR+ Sbjct: 185 VPTTEAGGRIHTSTATVAVLP-EVEEVDVEINPNDIKVDVFRSGGHGGQSVNTTDSAVRV 243 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV CQ ERSQ +N+ +A +LRAKLYE+ LQ+++ I E+ K+++G G Sbjct: 244 THIPTGIVVTCQDERSQIQNRERALKILRAKLYEMALQEQQ--REIAETRKSQVGTGERS 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +VLDGDLD+ + A + + Sbjct: 302 ERIRTYNF-PQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALILNDQ 346 >gi|261363763|ref|ZP_05976646.1| peptide chain release factor 1 [Neisseria mucosa ATCC 25996] gi|288568341|gb|EFC89901.1| peptide chain release factor 1 [Neisseria mucosa ATCC 25996] Length = 358 Score = 242 bits (617), Expect = 7e-62, Method: Composition-based stats. Identities = 121/350 (34%), Positives = 178/350 (50%), Gaps = 10/350 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + RL + P ++ + L RE L + + Q D Sbjct: 4 SILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQSDLA 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGT 128 E+ + + + K++ + + L D + ++EV AG GG Sbjct: 64 DAEEMLSDPE-MKDFATEEIEAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTGGD 122 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A LLRMY+R+AE+ +++ E + ++ E G K I G AY LK E G H Sbjct: 123 EAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGH 182 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS ++ V P D+ +IE++ +D RIDT+RASGAGGQH+N TDS Sbjct: 183 RVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDS 242 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG Sbjct: 243 AVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGS 300 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R N+ V+DGDL++ A +A + Sbjct: 301 GDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQ 349 >gi|170759975|ref|YP_001785502.1| peptide chain release factor 2 [Clostridium botulinum A3 str. Loch Maree] gi|169406964|gb|ACA55375.1| peptide chain release factor 2 [Clostridium botulinum A3 str. Loch Maree] Length = 327 Score = 242 bits (616), Expect = 8e-62, Method: Composition-based stats. Identities = 151/323 (46%), Positives = 216/323 (66%), Gaps = 1/323 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++P+ W N+ EA+ + E ++L + + +++ + D + L E+ L E+D + +E Sbjct: 1 MQNPNFWNNIKEAQKITSEEKYLKDKLIKYNHLRNTIEDIISLCEM-LSEEDDDMKKEII 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + IK E + + E+LLSGE D N+ + +H+G GGT++QDW +ML RMYTRWAEK Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F + +++ + E+AGIKS TL I G YG+LKGE+G+HRLVRISP+++N +R TSF+SI Sbjct: 120 FSIKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASI 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + D EIEI D +IDTYRA GAGGQHVN T+SAVRITHIPTG++VQCQ ERSQ Sbjct: 180 EVLPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK A +L++KL EL+ + +E ++GWG QIRSYV PY +VKD RT Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E ++ V++GD++ F+ L Sbjct: 300 AETSNVDSVMNGDINMFITQYLK 322 >gi|15677534|ref|NP_274690.1| peptide chain release factor 1 [Neisseria meningitidis MC58] gi|20139351|sp|Q9JY93|RF1_NEIMB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|7226940|gb|AAF42034.1| peptide chain release factor 1 [Neisseria meningitidis MC58] gi|325134780|gb|EGC57417.1| peptide chain release factor 1 [Neisseria meningitidis M13399] gi|325199720|gb|ADY95175.1| peptide chain release factor 1 [Neisseria meningitidis H44/76] gi|325205597|gb|ADZ01050.1| peptide chain release factor 1 [Neisseria meningitidis M04-240196] Length = 358 Score = 242 bits (616), Expect = 8e-62, Method: Composition-based stats. Identities = 120/349 (34%), Positives = 176/349 (50%), Gaps = 8/349 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + RL + P ++ + L RE L + + + D Sbjct: 4 SILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQSDLA 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E+ + + E + + Q L D + ++E+ AG GG E Sbjct: 64 DAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIRAGTGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY+R+AE+ +++ E + ++ E G K I G AY LK E G HR Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ V P D+ +IE++ +D RIDT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGDL++ A +A + Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQ 349 >gi|110833384|ref|YP_692243.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2] gi|119361504|sp|Q0VS77|RF1_ALCBS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|110646495|emb|CAL15971.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2] Length = 361 Score = 242 bits (616), Expect = 8e-62, Method: Composition-based stats. Identities = 122/346 (35%), Positives = 179/346 (51%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L DP + N + + L RE +D + ++ Q + D+ + Sbjct: 9 LDKLADRFEELAGLLSDPDVISNQNQFRDLSREYAEIDPVVKCYRQYQQAVEDHGAAKAM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + Q L D + +LEV AG GG E+ Sbjct: 69 QDDSDADMREMGAEEARDAQERMEALAAELQKLMLPKDPRDGANVFLEVRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++A++R +K E + +GE G K + G Y +K E G HR+ R Sbjct: 129 FAGDLFRMYSKYADQRGWKVEMVSASEGEHGGYKEVIARVIGDGVYSRMKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ + +D +I+I D RIDTYR+SGAGGQHVNTTDSAVRI Sbjct: 189 VPATESQGRIHTSACTVAIMAEAEDLGDIKIRTEDLRIDTYRSSGAGGQHVNTTDSAVRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTGVVV+CQ ERSQHKNKA+A ++L AKLY+ Q+ A K+ +G G Sbjct: 249 THLPTGVVVECQDERSQHKNKARAMSLLSAKLYDA--QQNAAHAEQAAERKSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +++++GDLD+ + A LA + Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYRLNEIVEGDLDEILGALLAEYQ 351 >gi|116629958|ref|YP_815130.1| protein chain release factor B [Lactobacillus gasseri ATCC 33323] gi|238854078|ref|ZP_04644428.1| peptide chain release factor 2 [Lactobacillus gasseri 202-4] gi|282851440|ref|ZP_06260805.1| peptide chain release factor 2 [Lactobacillus gasseri 224-1] gi|311110410|ref|ZP_07711807.1| peptide chain release factor 2 [Lactobacillus gasseri MV-22] gi|116095540|gb|ABJ60692.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus gasseri ATCC 33323] gi|238833312|gb|EEQ25599.1| peptide chain release factor 2 [Lactobacillus gasseri 202-4] gi|282557408|gb|EFB63005.1| peptide chain release factor 2 [Lactobacillus gasseri 224-1] gi|311065564|gb|EFQ45904.1| peptide chain release factor 2 [Lactobacillus gasseri MV-22] Length = 332 Score = 242 bits (616), Expect = 8e-62, Method: Composition-based stats. Identities = 151/324 (46%), Positives = 209/324 (64%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + +A+ L+ E + K ++++ D LEL + D + +E S Sbjct: 1 MAEPGFWDDQEQAQSLINETNRMKEKSENFKRLEEKFEDAQTALELLKADPDPELSEELS 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + + LLS + D ++A +E+H GAGGTE+ DWA+MLLRMY R+A Sbjct: 61 KEMFSLSQSFHDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAANHN 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 K E + GEEAG+KS ++ I+G NA+G LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 121 LKFEIEDYEPGEEAGVKSVSVRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D SIE++I+ D RID YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ Sbjct: 181 EVIPEIDQSIEVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A NMLRAKL++LE +K+++ + ++ EIG+G QIRSYV PY MVKD RTN Sbjct: 241 LQNRETAMNMLRAKLFQLEEEKKKKQTEELKGNQKEIGFGSQIRSYVFHPYNMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + + V+DG LDDF+ A L Sbjct: 301 FETSDVNGVMDGKLDDFIYAYLQW 324 >gi|296313476|ref|ZP_06863417.1| peptide chain release factor 1 [Neisseria polysaccharea ATCC 43768] gi|296839995|gb|EFH23933.1| peptide chain release factor 1 [Neisseria polysaccharea ATCC 43768] Length = 358 Score = 242 bits (616), Expect = 8e-62, Method: Composition-based stats. Identities = 121/349 (34%), Positives = 175/349 (50%), Gaps = 8/349 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + RL + P ++ + L RE L + + + D Sbjct: 4 SILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQSDLA 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E+ + + E + + Q L D + ++EV AG GG E Sbjct: 64 DAEEMLSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEVRAGTGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY+R+AE+ +++ E + ++ E G K I G AY LK E G HR Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ V P D+ +IE++ +D RIDT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGDL + A +A + Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQ 349 >gi|189218067|ref|YP_001938709.1| protein chain release factor B [Methylacidiphilum infernorum V4] gi|189184925|gb|ACD82110.1| Protein chain release factor B [Methylacidiphilum infernorum V4] Length = 337 Score = 242 bits (616), Expect = 8e-62, Method: Composition-based stats. Identities = 170/326 (52%), Positives = 216/326 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P WQ +A+ + + L S K + +R D L +L E +D S+ +E Sbjct: 1 MASPSFWQTPEKAEKALSRSKELKAKFSDYKTLVNRFKDIEALYDLLQESEDPSLEKELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + ++ + + +LS D +A L VH+GAGGTE+ DWA MLLRMY R+AE+ Sbjct: 61 QEINAYSDLLDSIEVKLVLSDPMDQKNAILSVHSGAGGTEACDWAAMLLRMYQRYAERHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK ++I GEEAGIKSA+LLI G AYG+LK E+GVHRLVRISP+++ +R TSF+S+ Sbjct: 121 FKVSLIDILPGEEAGIKSASLLISGSYAYGYLKAERGVHRLVRISPFNAQGKRQTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V VD+SIEIEI ESD RID +R+ G GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ Sbjct: 181 DVVAEVDESIEIEIKESDLRIDVFRSGGHGGQGVNTTDSAVRITHLPTGIVVVCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NKA A +LR++LYELE K+ K EIGWGRQIRSYVLQPY+MVKDLRT Sbjct: 241 IQNKATAMKILRSRLYELEKDKKRAEMERIYGQKGEIGWGRQIRSYVLQPYKMVKDLRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355 + KT +VLDGDLD F+ A L KK Sbjct: 301 VTKTQVEEVLDGDLDSFIWAYLLGKK 326 >gi|254422250|ref|ZP_05035968.1| peptide chain release factor 2 [Synechococcus sp. PCC 7335] gi|196189739|gb|EDX84703.1| peptide chain release factor 2 [Synechococcus sp. PCC 7335] Length = 345 Score = 242 bits (616), Expect = 9e-62, Method: Composition-based stats. Identities = 139/336 (41%), Positives = 212/336 (63%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 ++ L + P W A+ ++E + ++ L D+ +LEL Sbjct: 1 MNAKIKDLEQLSAQPDFWDEQESAQKSLQELNDYKANLDQVEGWSTSLEDSEAILELLDL 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D S+L E + R+ E++ + + LLSG D A L ++AGAGGT++QDW+ MLL Sbjct: 61 EQDESLLLEAESTVNRLSKELDQWELQQLLSGPYDKAGAVLTINAGAGGTDAQDWSEMLL 120 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTRW+E+ ++ + +E +G+EAG+KS T+ + G AYG+LKGE+G HRLVRISP+++ Sbjct: 121 RMYTRWSEQNGYQFKLIEKSEGDEAGLKSVTMEVYGRYAYGYLKGEKGTHRLVRISPFNA 180 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 N +R TSF+ + V P++D +E++I + D I T R+ GAGGQ+VN ++AVRITH+PT Sbjct: 181 NGKRQTSFAGVEVMPILDQKVELDIPDKDLEIKTSRSGGAGGQNVNKVETAVRITHLPTS 240 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 + V+C QERSQ +NK +A +L +KL + ++R + E WG QIR+YV Sbjct: 241 ISVRCTQERSQLQNKEKAMALLTSKLLVIAQEQRTQAIADIRGDMVEAAWGNQIRNYVFH 300 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 PYQMVKDLRT++E T+ DV++GDL+ F++A L + Sbjct: 301 PYQMVKDLRTSVETTAVDDVMNGDLEAFIQAYLHQE 336 >gi|188526975|ref|YP_001909662.1| peptide chain release factor 2 [Helicobacter pylori Shi470] gi|238691887|sp|B2US00|RF2_HELPS RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|188143215|gb|ACD47632.1| peptide chain release factor 2 [Helicobacter pylori Shi470] gi|308061460|gb|ADO03348.1| peptide chain release factor 2 [Helicobacter pylori Cuz20] Length = 363 Score = 242 bits (616), Expect = 9e-62, Method: Composition-based stats. Identities = 174/352 (49%), Positives = 241/352 (68%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 13 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L ++ L ELA ++D L + ++ V+ + E +LSGE D+++A + + Sbjct: 73 KNSLDESTELFELAQNDNDEVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSTAKN--EE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362 >gi|317179435|dbj|BAJ57223.1| peptide chain release factor 2 [Helicobacter pylori F30] Length = 363 Score = 242 bits (616), Expect = 9e-62, Method: Composition-based stats. Identities = 174/352 (49%), Positives = 241/352 (68%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 13 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L ++ L ELA ++D L + ++ V+ + E +LSGE D+++A + + Sbjct: 73 KNSLDESAELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSTAKN--EE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362 >gi|261839033|gb|ACX98798.1| peptide chain release factor 2 [Helicobacter pylori 52] Length = 363 Score = 242 bits (616), Expect = 9e-62, Method: Composition-based stats. Identities = 174/352 (49%), Positives = 241/352 (68%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 13 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L ++ L ELA ++D L + ++ V+ + E +LSGE D+++A + + Sbjct: 73 KNSLDESAELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362 >gi|160878415|ref|YP_001557383.1| peptide chain release factor 2 [Clostridium phytofermentans ISDg] gi|160427081|gb|ABX40644.1| peptide chain release factor 2 [Clostridium phytofermentans ISDg] Length = 333 Score = 242 bits (616), Expect = 9e-62, Method: Composition-based stats. Identities = 161/324 (49%), Positives = 220/324 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E+P+ W + +++ M+E ++L + +S ++ + D L LLE+ EE+D ++ E Sbjct: 1 MEEPNFWDSQEKSQAYMKELKNLKDIVSEYNGLKQQYDDILTLLEMGYEEEDPDLIPEIE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L++ +E + +LLS E D ++A L +HAGAGGTES DWA+ML RMY RWA+K+ Sbjct: 61 QELEQFIDALEELRLNTLLSDEYDKDNAILTLHAGAGGTESCDWASMLYRMYQRWADKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + TE L+ DGEEAG KS TL I G NAYG LK E+GVHRLVRISP+++ +R TSF S Sbjct: 121 YTTELLDFLDGEEAGYKSVTLQINGLNAYGHLKSERGVHRLVRISPFNAAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ I+IEI++ D RIDTYR+SGAGGQHVN T SA+RITHIPTG VVQCQ ERSQ Sbjct: 181 DVMPDIEEDIDIEINDDDLRIDTYRSSGAGGQHVNKTSSAIRITHIPTGTVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK +A ML+AKLY + ++ + +I +G QIRSYVLQPY MVKD RTN Sbjct: 241 FQNKDKAMQMLKAKLYLKKKEENAAKESGIRGEIRDINFGNQIRSYVLQPYTMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 + ++ VLDG++D F+ A L Sbjct: 301 TDVSNALGVLDGNIDPFINAYLKW 324 >gi|299768411|ref|YP_003730437.1| peptide chain release factor 2 [Acinetobacter sp. DR1] gi|298698499|gb|ADI89064.1| peptide chain release factor 2 [Acinetobacter sp. DR1] Length = 310 Score = 242 bits (616), Expect = 9e-62, Method: Composition-based stats. Identities = 167/307 (54%), Positives = 223/307 (72%), Gaps = 1/307 (0%) Query: 47 RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106 +E+ L+N I+ + + +L D +L+LA+E DD S+L++ L + E+ +F Sbjct: 3 KEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELSAAEDELAKLEFRR 62 Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S D N Y+E+ +G+GGTE+QDWA+MLLRMY RW E+ FK E +E+ DG+ AGIK Sbjct: 63 MFSNPMDPNPCYVEIQSGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAGIK 122 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ ++G AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+ S Sbjct: 123 SATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDINPS 182 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D R DTYRASGAGGQH+N TDSAVR+TH PTG+VV CQ +RSQH N+ AW LRA+LYE Sbjct: 183 DVRTDTYRASGAGGQHINKTDSAVRLTHTPTGIVVACQNQRSQHANRDHAWKQLRARLYE 242 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LE+QKR E A E SK++IGWG QIRSYVL +KDLRT +E ++ VLDGDLD F Sbjct: 243 LEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDD-SRIKDLRTGVENSNTGAVLDGDLDRF 301 Query: 347 MKATLAI 353 ++A+L Sbjct: 302 IEASLKQ 308 >gi|114565810|ref|YP_752964.1| peptide chain release factor 2 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336745|gb|ABI67593.1| bacterial peptide chain release factor 2 (bRF-2) [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 334 Score = 242 bits (616), Expect = 9e-62, Method: Composition-based stats. Identities = 152/328 (46%), Positives = 217/328 (66%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 KT + W EA+ ++++ L ++ KE+ +LE+A EE+D ++ Q Sbjct: 2 QKKTLQENFWSERKEAQEILKQISKLQENLNLYKELMGTAQYLNDILEMAEEENDETLWQ 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E+ L ++ + L SG D ++A + +HAGAGGTE+QDW +L RMY+RWAE Sbjct: 62 ESVRELLALQKRFREFELLVLFSGPHDYSNAIVSLHAGAGGTEAQDWVEILFRMYSRWAE 121 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + E L+ DG+EAGIKS T L++GP A+G LK E+GVHRL+RISP+DS+ RRHTSF Sbjct: 122 NSSYSIEVLDFLDGDEAGIKSVTFLVRGPYAFGKLKCEEGVHRLIRISPFDSSGRRHTSF 181 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S+ V P +++ IE+ I+ D R+DTYR+SGAGGQH+N TDSAVRITH+P+G+VVQCQ E Sbjct: 182 ASLSVLPEINEDIEVLINVEDLRVDTYRSSGAGGQHINKTDSAVRITHLPSGIVVQCQNE 241 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQH N+ A +L+AKLY L+ ++ ++ + EI WG QIR+Y L P+ ++KD Sbjct: 242 RSQHANRLAAMKILQAKLYALKQKEAQDKLQSIKGDYKEIAWGSQIRTYTLNPFNLIKDH 301 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RTN+E + VLDG+LDD + A L K Sbjct: 302 RTNMEIGNVQAVLDGELDDLIFACLHWK 329 >gi|124007003|ref|ZP_01691832.1| peptide chain release factor 2 [Microscilla marina ATCC 23134] gi|123987456|gb|EAY27176.1| peptide chain release factor 2 [Microscilla marina ATCC 23134] Length = 324 Score = 242 bits (616), Expect = 9e-62, Method: Composition-based stats. Identities = 151/322 (46%), Positives = 210/322 (65%), Gaps = 2/322 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 P W + A+ +++E + + ++Q+ + IL E + Sbjct: 4 QPEFWDDPKAAEKVLKEIKSIKIWTERFDKVQNLWDELEILNEFLEAGEGSETEVTNL-- 61 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 +++ ++ +F+ +LS E D +A +E++ GAGGTES DWA ML+RMY W EK +K Sbjct: 62 FSKLEKALDELEFQKMLSDEEDPLNALIEINPGAGGTESMDWAGMLMRMYIMWGEKNNYK 121 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 + GE AG+KS TL I+G AYG LK E GVHRLVRISP+DS RRHTSF+S++ Sbjct: 122 VREVNYQAGEAAGVKSVTLEIEGDFAYGHLKAEIGVHRLVRISPFDSGGRRHTSFASVFA 181 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 YPVVDD+IEIEIS +D DT+RA GAGGQ+VN ++AVR+ H P+G++V+CQQERSQ + Sbjct: 182 YPVVDDTIEIEISPADIEWDTFRAGGAGGQNVNKVETAVRLKHKPSGIIVECQQERSQLQ 241 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 NK +A MLR++LY++E++K+ E E SK I +G QIRSYVL PY+MVKDLRT E Sbjct: 242 NKDKAMKMLRSRLYQVEMEKKNEARAKVEGSKKRIDFGSQIRSYVLHPYKMVKDLRTGHE 301 Query: 332 KTSPSDVLDGDLDDFMKATLAI 353 ++ +VLDGDL D+MKA L Sbjct: 302 RSDVQNVLDGDLSDYMKAFLMQ 323 >gi|319779045|ref|YP_004129958.1| Peptide chain release factor 1 [Taylorella equigenitalis MCE9] gi|317109069|gb|ADU91815.1| Peptide chain release factor 1 [Taylorella equigenitalis MCE9] Length = 355 Score = 242 bits (616), Expect = 9e-62, Method: Composition-based stats. Identities = 117/344 (34%), Positives = 189/344 (54%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + QRL ++ +P + ++ + L RER +D + KE + D +E+ Sbjct: 5 LEQLSQRLIEVDALLAEPDVADDMDRFRKLSRERSEIDPVVELFKEFEAAEGDLNTAVEM 64 Query: 76 ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + +E +RI+ + Q E L D +LE+ AG GG ES + Sbjct: 65 MSDPDLKEMGEEEMKSTKERIEQLEQKLQLELLPKDPDDGRSVFLEIRAGTGGDESAIFT 124 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE++ +K E + + E G + I+G YG LK E G HR+ R+ Sbjct: 125 GDLFRMYSRYAEQKGWKVELMSENPSELGGYREVIARIEGDGVYGQLKYESGAHRVQRVP 184 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P D+ E+ ++ +D RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 185 ETESQGRVHTSACTVAVLPEADELAEVVLNPADLRIDTFRASGAGGQHINKTDSAVRITH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+V +CQ +RSQHKNKA+A ++L A++ +++ Q+++ + K+ +G G + Sbjct: 245 LPTGIVAECQDDRSQHKNKARAMSVLAARINDIKRQEQQ--SKEAAERKSLVGSGDRSER 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +++G LD+ A ++ ++ Sbjct: 303 IRTYNY-PQGRVTDHRINLTLYKLQQIMEGSLDELTNALISERQ 345 >gi|317010450|gb|ADU84197.1| peptide chain release factor 2 [Helicobacter pylori SouthAfrica7] Length = 363 Score = 242 bits (616), Expect = 9e-62, Method: Composition-based stats. Identities = 176/352 (50%), Positives = 243/352 (69%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 13 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 +D L +++ L ELA ++D L + ++ V+ + E +LSGE D+++A + + Sbjct: 73 KDSLDESVELFELAQNDNDEVTLSLLYEEALVLEHSVQKVEIEIMLSGENDASNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 193 NESGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+NI ++ +LDGD+D ++ L K Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362 >gi|325123846|gb|ADY83369.1| peptide chain release factor 2 [Acinetobacter calcoaceticus PHEA-2] Length = 310 Score = 242 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 168/307 (54%), Positives = 224/307 (72%), Gaps = 1/307 (0%) Query: 47 RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106 +E+ L+N I+ + + +L D +L+LA+E DD S+L++ L + E+ +F Sbjct: 3 KEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELGAAEDELAKLEFRR 62 Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S D N Y+E+ +G+GGTE+QDWA+MLLRMY RW E+ FK E +E+ DG+ AGIK Sbjct: 63 MFSNPMDPNPCYVEIQSGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAGIK 122 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ ++G AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+ S Sbjct: 123 SATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDINPS 182 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D R DTYRASGAGGQH+N TDSAVR+THIPTG+VV CQ +RSQH N+ AW LRA+LYE Sbjct: 183 DVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQLRARLYE 242 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LE+QKR E A E SK++IGWG QIRSYVL +KDLRT +E ++ VLDGDLD F Sbjct: 243 LEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDD-SRIKDLRTGVENSNTGAVLDGDLDRF 301 Query: 347 MKATLAI 353 ++A+L Sbjct: 302 IEASLKQ 308 >gi|218885659|ref|YP_002434980.1| peptide chain release factor 2 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|65736690|dbj|BAD98502.1| peptide release factor 2 [Desulfovibrio vulgaris] gi|218756613|gb|ACL07512.1| Peptide chain release factor 2 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 376 Score = 242 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 157/349 (44%), Positives = 215/349 (61%), Gaps = 5/349 (1%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 L G D RL + + P W N + +++E+ L+ I+ ++ ++ Sbjct: 19 ASLWGRLDLAGNRNRLDEIERQLSSPDAWNNPEKLTPVLQEKSQLEGEITRLERLETCRR 78 Query: 68 DNLILLELALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 D L LA EE+ + + ++ ++ + LLSG+ D A +E+H Sbjct: 79 DVTEWLTLAEEEEAAGEPGQEALESLAEQVTVLQNLLQETEMNMLLSGKEDRMPAIVEIH 138 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTE+QDWA ML+RMY RWA+ K E L+ G+EAG+KS TL + GPNAYG LK Sbjct: 139 PGAGGTEAQDWAEMLVRMYLRWADTHDMKAEYLDYLAGDEAGVKSVTLRMAGPNAYGLLK 198 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE+G+HRL+RISP+DS+ RRHTSF+S+ V P V I ++I E+D RID +R+SG GGQ Sbjct: 199 GEKGIHRLIRISPFDSSGRRHTSFASVDVIPDVGQEITVDIKETDLRIDIFRSSGPGGQS 258 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT SAVRITH+PTG+ QCQ E+SQH N+ A +LRA+LYELEL+K EE + Sbjct: 259 VNTTSSAVRITHLPTGISAQCQNEKSQHSNRDTAMQILRARLYELELRKLEEEKKAQYAG 318 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K IG+G QIR+Y LQPY++VKD RTN E VLDG +D ++ L Sbjct: 319 KDAIGFGSQIRTYTLQPYRLVKDHRTNTEIGDVEAVLDGRIDQLLRDYL 367 >gi|308183967|ref|YP_003928100.1| peptide chain release factor 2 [Helicobacter pylori SJM180] gi|308059887|gb|ADO01783.1| peptide chain release factor 2 [Helicobacter pylori SJM180] Length = 363 Score = 242 bits (616), Expect = 1e-61, Method: Composition-based stats. Identities = 174/352 (49%), Positives = 242/352 (68%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 13 LQNKCDNIALIIKPERIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L +++ L ELA ++D L + ++ V+ + E +LSGE D+++A + + Sbjct: 73 KNSLDESVELFELAQNDNDEVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 193 NESGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362 >gi|150388626|ref|YP_001318675.1| peptide chain release factor 2 [Alkaliphilus metalliredigens QYMF] gi|149948488|gb|ABR47016.1| peptide chain release factor 2 [Alkaliphilus metalliredigens QYMF] Length = 329 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 150/324 (46%), Positives = 212/324 (65%), Gaps = 1/324 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 + W + +A+ +++E + + + I + + D+ + +++ E D + Sbjct: 1 MSQENFWDDQDKAQEILKEAKMVKDRIEDYQSVIDQTEEVQMMITFTEEGDQTFEKELKE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 Q V+ + +LL G+ D L +HAG GG ++QDWA ML+RMY+RWAE + Sbjct: 61 TINQLDV-RVKTMKTATLLQGQYDRFSVILSIHAGTGGLDAQDWAKMLMRMYSRWAEAKG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + E L++ EAGIKS T LI+G NAYG+LKGE+GVHRLVRISP+DS+ +RHTSF+S+ Sbjct: 120 YGVEILDLIQDPEAGIKSVTFLIEGINAYGYLKGEKGVHRLVRISPFDSSGKRHTSFASV 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DDSIE+EI+ +D +IDTYRASGAGGQHVN TDSAVRITHIPTG+VVQCQ +RSQ Sbjct: 180 DVMPELDDSIEVEINPNDLKIDTYRASGAGGQHVNKTDSAVRITHIPTGLVVQCQNQRSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H N+ + ML+AKL EL+ ++++E + ++I WG QIRSYV PY + KD RTN Sbjct: 240 HSNRETSMKMLKAKLIELKEREQKEKIEDLQGEYSQIAWGSQIRSYVFNPYNLAKDHRTN 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + V+DGD+D F+ L Sbjct: 300 TEMGNIQSVMDGDIDLFINEYLTW 323 >gi|162449904|ref|YP_001612271.1| peptide chain release factor 2 [Sorangium cellulosum 'So ce 56'] gi|161160486|emb|CAN91791.1| peptide chain release factor 2 [Sorangium cellulosum 'So ce 56'] Length = 350 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 141/329 (42%), Positives = 214/329 (65%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 L L T W + +A+ ++R+R +++ + + + + D LEL E D Sbjct: 2 LQDLTQTTLSSGFWNDQEKAQAVLRKRAQVESKLEVAQRLGREIEDLAEYLELGAAEGDE 61 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 ++ + I + + + +LSG AD +A + +H GAGGT+++DWA+MLLRMY Sbjct: 62 GVIADADAQADAIAGRLRKVELDRMLSGPADRGNAIVSIHPGAGGTDAKDWASMLLRMYL 121 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 R+ E+R +KTE ++ DG+EAGI + TL + G AYG+L+ E GVHRLVR+SP++++ R Sbjct: 122 RFCERRGYKTEIIDYQDGDEAGIDAVTLTVSGDAAYGYLRSEAGVHRLVRMSPFNADHTR 181 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 T+F+++ V P DD I I+++E D I T RA G GGQ+VN ++AVR+ HIPTG+ + Sbjct: 182 QTAFAAVEVTPDSDDEINIQVNEKDIEITTMRAGGKGGQNVNKVETAVRLRHIPTGLNIV 241 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 C+ ERSQH+N+A A +L+AKLYE+ELQKRE ++K+ I +G QIR+YVL PY++ Sbjct: 242 CRAERSQHQNRAMAMKVLKAKLYEMELQKREAEVQAYNAAKSSINFGSQIRNYVLAPYRL 301 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 VKD+RT+ E T VLDGDL+ F++A L Sbjct: 302 VKDVRTSTEATDVDAVLDGDLEGFIEAYL 330 >gi|291547175|emb|CBL20283.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus sp. SR1/5] Length = 358 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 121/351 (34%), Positives = 191/351 (54%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D+ + R L + +P + + + LM+E+ L + KE + Sbjct: 1 MFDKLDDLLVRFEELLNELGEPGVTDDPAHFQKLMKEQSDLQPIVDAYKEYKKNKETIED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127 L + E D + + + L K VE + E DS + +E+ GAGG Sbjct: 61 SLSMLESEKDEEMREMLKEELSDAKKRVEELEHELKILLLPKDPNDSKNVIVEIRGGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY ++AE R++KTE L +++ G K T +IKG AY LK E GV Sbjct: 121 DEAALFAAEIYRMYVKYAESRRWKTEMLSLNENGIGGFKEVTFMIKGEGAYSRLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ + P + I+ + ++C+ D +RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTCTVAIMP-EAEEIDFHLDLNECKFDVFRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V+ CQ E+SQ KNK +A +LR++LYE+EL K+ + E+ +++IG Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALRVLRSRLYEMELAKQHD--AEAEARRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + ++L+GDLD+ + + +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHRLENILNGDLDEIIDSLIAADQ 347 >gi|320103729|ref|YP_004179320.1| peptide chain release factor 2 (bRF-2) [Isosphaera pallida ATCC 43644] gi|319751011|gb|ADV62771.1| bacterial peptide chain release factor 2 (bRF-2) [Isosphaera pallida ATCC 43644] Length = 334 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 153/325 (47%), Positives = 205/325 (63%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + AK + E + L+ + + + + D L+ELA E D S+ E Sbjct: 1 MNAPDFWNHQDRAKATIAEIKTLNAVLKPYEALVKQAEDLQALVELADEAGDDSLDDEID 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 Q+ + + + +S+LSG D +A+LE+H G GGTE+ DW+ MLLRMY WAE + Sbjct: 61 QATQKAREAFDKFELQSMLSGMNDHCNAFLEIHPGEGGTEACDWSEMLLRMYMMWAESKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K E + DG AGI+SA L I G A+G+LKGE GVHRLVRISP+D+ RR TSF+S+ Sbjct: 121 YKVELISREDGGVAGIQSAQLKISGDYAFGYLKGEAGVHRLVRISPFDAAGRRQTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DD+IEIEI + D + D +R G GGQH N T+S VR TH+PTGVV + + ERSQ Sbjct: 181 DVTPEIDDTIEIEIRDCDLKRDVFRCGGPGGQHQNKTESGVRYTHLPTGVVAESRSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N A +L+AKL LE +KRE + K++IG+G QIRSYVLQPY +VKDLRT Sbjct: 241 FQNDDLALKLLKAKLIRLEEEKREAESIKAYDDKSKIGFGSQIRSYVLQPYTLVKDLRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 E +P VLDGDLD F+ A L +K Sbjct: 301 YETGNPRAVLDGDLDGFINAYLRMK 325 >gi|150021425|ref|YP_001306779.1| peptide chain release factor 2 [Thermosipho melanesiensis BI429] gi|166225118|sp|A6LN93|RF2_THEM4 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|149793946|gb|ABR31394.1| peptide chain release factor 2 [Thermosipho melanesiensis BI429] Length = 369 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 166/350 (47%), Positives = 235/350 (67%), Gaps = 2/350 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ ++ + +F ++ + L L + W + AK + + Q + I + + Sbjct: 12 EVKKRYEDIVKVFHPEDKKKELEELEKLMGESDFWNDQKRAKEISQNAQRIRKIIDDMVD 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+++L + L L E+D + L + I+ +V+ + E +L+ + DS++AYL + Sbjct: 72 IENKLE--DLEAGLELLEEDATFLDTIKQLIDDIERKVKTFELELILNEKFDSSNAYLSI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTESQDWA+MLLRMY RWAE+R F + ++ GEEAGIKSA L IKG YG+L Sbjct: 130 HPGAGGTESQDWASMLLRMYMRWAERRGFDVQIVDYQPGEEAGIKSAMLYIKGEYVYGYL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+GVHRLVRISP+D+N RRHTSF+S+ V P ++D I++EI+ D RIDTYRASGAGGQ Sbjct: 190 KYERGVHRLVRISPFDANKRRHTSFASVNVMPEIEDDIDVEINPEDLRIDTYRASGAGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN T+SAVRITHIPTG+VV CQ ERSQ +NK A +L+A+LY+LEL+KR++ + Sbjct: 250 YVNKTESAVRITHIPTGIVVTCQTERSQLQNKETAMKVLKARLYQLELEKRQKQLEEIQG 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +I WG QIRSYV QPY MVKD RTN+E + V+DGD+D F+++ L Sbjct: 310 ELKDISWGNQIRSYVFQPYTMVKDHRTNVETGNIDAVMDGDIDIFIESEL 359 >gi|261837620|gb|ACX97386.1| peptide chain release factor RF-2 [Helicobacter pylori 51] Length = 363 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 174/352 (49%), Positives = 241/352 (68%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 13 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L ++ L ELA ++D L + ++ V+ + E +LSGE D+++A + + Sbjct: 73 KNSLDESTELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362 >gi|218779410|ref|YP_002430728.1| peptide chain release factor 2 [Desulfatibacillum alkenivorans AK-01] gi|218760794|gb|ACL03260.1| peptide chain release factor 2 [Desulfatibacillum alkenivorans AK-01] Length = 327 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 148/322 (45%), Positives = 222/322 (68%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 W + + +++ER + + + +++ + L + +LLEL +EE+D ++E Sbjct: 1 MAQDGFWDSPDKNTAILKERTSITSLVEGWEKLAEELSEAEVLLELGVEEEDGQTIEEAR 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +L +I+ ++ +L GE D+ +A + ++AGAGGT++QDWA MLLRMY RW E++ Sbjct: 61 QHLVKIEKGIDKLSLSRMLDGEDDARNAIVAINAGAGGTDAQDWAEMLLRMYLRWVEQKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F ++ G+EAG+K T + G AYG+LK E+GVHRLVRISP++SN +R TSF+S+ Sbjct: 121 FSYSIIDYQPGDEAGVKGVTFTVTGDYAYGYLKTEEGVHRLVRISPFNSNGKRQTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 VYP +D I ++++E D RID +RASGAGGQHVN T SAVRI HIPTG+VVQCQQE+SQ Sbjct: 181 AVYPEIDQEIVVDVNEKDLRIDVFRASGAGGQHVNKTSSAVRILHIPTGIVVQCQQEKSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H+N+ A +L+A+LY++E +++++ +K EIG+G QIRSYVL PYQMVKD R N Sbjct: 241 HRNRDLAMKVLKARLYQVEQEQQQKQMQDNYEAKEEIGFGNQIRSYVLHPYQMVKDHRIN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 ++ + + VLDGD+D F++A L Sbjct: 301 MDVGNVNAVLDGDIDPFIEAVL 322 >gi|224543374|ref|ZP_03683913.1| hypothetical protein CATMIT_02574 [Catenibacterium mitsuokai DSM 15897] gi|224523701|gb|EEF92806.1| hypothetical protein CATMIT_02574 [Catenibacterium mitsuokai DSM 15897] Length = 371 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 148/360 (41%), Positives = 207/360 (57%), Gaps = 7/360 (1%) Query: 2 KLSRQLNCLGGLFD-------WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN 54 ++ L L D + + + L +T D H W + A + + Sbjct: 5 EIKNGLEDARLLLDQLYVSANIEVLKREIEGLTVQTMDEHFWDDQAHATKVYAHLNEMKK 64 Query: 55 AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114 ++ + + + E + +D + ++ ++ + L E D Sbjct: 65 VADTDASLEASYKELMEVYEYVKDTEDPDFMASLEEDYMTFHKNLDEFEKTLLFDQEYDH 124 Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 ++A +E+H GAGGTESQDWA ML+RMY R+ EK+ +K + + G+EAG+KS ++ G Sbjct: 125 SNAIVEIHPGAGGTESQDWAEMLMRMYIRYGEKKGWKVDVDDYLAGDEAGLKSCSIRFTG 184 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 NAYG L+ E+GVHRLVRISP+DS+ RRHTSF+S+ V P +DD IEI I + RIDTYR Sbjct: 185 YNAYGHLRAEKGVHRLVRISPFDSSKRRHTSFASVEVSPELDDDIEITIDPKNLRIDTYR 244 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 ASGAGGQH+N TDSAVRITHIPT VV CQ +RSQ +N+ QA ML++KLY L ++ E Sbjct: 245 ASGAGGQHINKTDSAVRITHIPTNTVVSCQSQRSQLQNREQAMLMLKSKLYLLMQEEHAE 304 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + + K I WG QIRSYVL PY MVKD R+ E +LDG+LDD + A L + Sbjct: 305 KLSEIQGEKKNIEWGSQIRSYVLHPYSMVKDNRSGYESNDQKKILDGELDDLIYAYLRSQ 364 >gi|308063032|gb|ADO04919.1| peptide chain release factor 2 [Helicobacter pylori Sat464] gi|317176986|dbj|BAJ54775.1| peptide chain release factor 2 [Helicobacter pylori F16] Length = 363 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 174/352 (49%), Positives = 241/352 (68%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 13 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L ++ L ELA ++D L + ++ V+ + E +LSGE D+++A + + Sbjct: 73 KNSLDESTELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSTAKN--EE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362 >gi|261379805|ref|ZP_05984378.1| peptide chain release factor 1 [Neisseria subflava NJ9703] gi|284797490|gb|EFC52837.1| peptide chain release factor 1 [Neisseria subflava NJ9703] Length = 358 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 122/349 (34%), Positives = 175/349 (50%), Gaps = 8/349 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + RL + P ++ + L RE L + + Q D Sbjct: 4 SILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQSDLA 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E+ + + E + + Q L D + ++EV AG GG E Sbjct: 64 DAEEMLSDPEMKDFAAEEIEAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY+R+AE+ +++ E + ++ E G K I G AY LK E G HR Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ V P D+ +IE++ +D RIDT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV+CQ RSQH NKAQA +L A L + QKRE A K+ IG G Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAALLNDA--QKREAQAKEAAERKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGDL++ A +A + Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQ 349 >gi|260889274|ref|ZP_05900537.1| peptide chain release factor 2 [Leptotrichia hofstadii F0254] gi|260860685|gb|EEX75185.1| peptide chain release factor 2 [Leptotrichia hofstadii F0254] Length = 352 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 167/353 (47%), Positives = 225/353 (63%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + L GG+FD +N + L KT + W N ++ +++ + + Sbjct: 1 MKLTLKKSGGIFDIENLKNEIDGLEKKTFEADFW-NSENSQEILKAISTNKKLLEEYSSL 59 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 D ++E D+ + Q +K E++ + + LL E D N+A L ++ Sbjct: 60 NGLFEDVSTIIEFIEMGDNSFENE-LEQKAQDLKNEIDNFKTKLLLDEEYDMNNAILTIN 118 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTE+ DWA ML RMY RWA + FK E L+ GEEAGIKS TL IKG AYG+LK Sbjct: 119 SGAGGTEACDWAEMLYRMYDRWANRHDFKVEILDSLAGEEAGIKSVTLNIKGNYAYGYLK 178 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE+GVHRLVRISP+DSN+RRHTSF+++ V P ++D +EI+I D +IDTYRASGAGGQH Sbjct: 179 GEKGVHRLVRISPFDSNARRHTSFAAVNVTPEIEDDVEIDIRTEDLKIDTYRASGAGGQH 238 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPT VV CQ ERSQ KN+ A +L++KL+ELEL+KRE+ + + Sbjct: 239 VNTTDSAVRITHIPTNTVVTCQNERSQLKNRETAMKILKSKLFELELEKREKEMAELKGT 298 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +++I WG QIRSYV QPY+MVKD RT E+ + V+DGD+D F+ L K Sbjct: 299 ESKIEWGSQIRSYVFQPYKMVKDHRTKAEEGNVEKVMDGDIDLFINEYLKYAK 351 >gi|312147930|gb|ADQ30589.1| peptide chain release factor 2 [Borrelia burgdorferi JD1] Length = 358 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 148/352 (42%), Positives = 216/352 (61%), Gaps = 4/352 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +Q + + ++ + + W + A+ +++ + L N I +E+ Sbjct: 8 LLKQAEDIWRKLCKNEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEEL 67 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 +++ D L ++ ++ + + S E D+N+A+L +H Sbjct: 68 INKIKDLSDL---CEIAENEKDTNGLEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIH 124 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTE+ DW ML RMY+R+AE++K+KTE +++ + E GIKS T+ IKG AYG LK Sbjct: 125 SGAGGTEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLK 183 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRL+RISP+D+ +RHTSF+S++V PV+DD IEI I D RIDTYRASGAGGQH Sbjct: 184 SEVGIHRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQH 243 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T SAVRITHI TG+V Q Q +RSQHKNK A +L+++LYE K +E + + Sbjct: 244 VNKTSSAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDT 303 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K EI WG QIRSYV QPY +VKD RT E ++ + V+DG++D+F++ L K Sbjct: 304 KKEISWGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 355 >gi|291299376|ref|YP_003510654.1| peptide chain release factor 2 [Stackebrandtia nassauensis DSM 44728] gi|290568596|gb|ADD41561.1| peptide chain release factor 2 [Stackebrandtia nassauensis DSM 44728] Length = 376 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 147/353 (41%), Positives = 216/353 (61%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ L + + D D S L P LW + A+ + ++ + ++ I+++ Sbjct: 13 LNSTLESVTAVLDLDALSVEKSELEAAAASPDLWDDTTHAQKVTSRLSYVQSELNRIEDL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L +LA E+D + ++E S L + +E + +LLSGE DS +A + + Sbjct: 73 RRRLDDAEVLWDLAQSEEDPAAVEEASKELAALSKAIEELEVRTLLSGEYDSREALISIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG +S D+A L+RMY RWAE+ + TE ++ EEAGIKSAT +K P AYG L Sbjct: 133 SGAGGADSADFAEQLMRMYLRWAERHGYPTEVYDVSYAEEAGIKSATFAVKAPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HR+VRIS YD+ RR T+F+++ V PVV+ + +I+I + + R+D YR+SG GGQ Sbjct: 193 VEQGTHRVVRISKYDNQGRRQTAFAAVEVVPVVEQTDDIDIPDDEIRVDVYRSSGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+ TG+VV CQ ERSQ +N+A A +L+AKL ++ + S Sbjct: 253 VNTTDSAVRITHLETGIVVSCQNERSQLQNRATAMAVLKAKLLARRREEENAKIDELRGS 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYV PYQMVKDLRT E + V DG++D ++A + +K Sbjct: 313 -VQASWGEQMRSYVQHPYQMVKDLRTGWETANVMAVYDGEIDGLIEAGIRWRK 364 >gi|310659436|ref|YP_003937157.1| peptide chain release factor rf-1 [Clostridium sticklandii DSM 519] gi|308826214|emb|CBH22252.1| peptide chain release factor RF-1 [Clostridium sticklandii] Length = 356 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 115/351 (32%), Positives = 188/351 (53%), Gaps = 11/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + ++ LN K DP + N + LM+E ++ + +E + Sbjct: 1 MFDKIEFVEEKYKELNQKISDPEVINNQSLWQKLMKEHAEIEPVVMKYREYKTVKSQFEG 60 Query: 72 LLELALEEDDCSIL----QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 E+ +D + E S+ + ++ E + L D + +E+ AGAGG Sbjct: 61 AKEILESSNDEEMRELAKMELSELEESLEAVSEELRVLLLPKDPNDDKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A +L RMY+ +A +++K E + +D G K +I G AY LK E GV Sbjct: 121 DEAALFAGVLFRMYSMYASSKRWKVELMSSNDTGVGGYKEVVFMIIGKGAYSRLKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P V++ E+E++ +D R+D +R+SG GGQ VNTTD Sbjct: 181 HRVQRVPETESAGRIHTSTATVAVLPEVEEVGEVELNLNDVRVDVFRSSGNGGQSVNTTD 240 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+V+ Q E+SQ KNK +A+ +LRAKLY++EL+K + K+++G Sbjct: 241 SAVRLTHVPTGIVISMQDEKSQLKNKEKAFKILRAKLYDIELEK--AQKEVARERKSQVG 298 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P + D R + L+GDLD+ + A + + Sbjct: 299 TGDRSERIRTYNY-PQGRITDHRIGVTLYKLDAFLNGDLDEMVDALITTDQ 348 >gi|303239757|ref|ZP_07326281.1| peptide chain release factor 1 [Acetivibrio cellulolyticus CD2] gi|302592694|gb|EFL62418.1| peptide chain release factor 1 [Acetivibrio cellulolyticus CD2] Length = 360 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 125/351 (35%), Positives = 194/351 (55%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68 +FD A R +N K DP + +N E + LM+E L + E + + D Sbjct: 1 MFDRLQAAENRYEEMNHKLSDPAVIENQDEYRKLMKEHAELQELVGKYGEYKKVTQEIAD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 LL L++D +++ + + + + L D D +E+ GAGG Sbjct: 61 AKELLNDKLDKDFREMVEMELKEAEEGLEKIKKELKILLLPKDPNDEKDVIVEIRGGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A +L RMYTR+AE+ +KTE L+ + E G K I+G A+ LK E GV Sbjct: 121 EEAALFAGVLFRMYTRYAERCGWKTEMLDSNPTEIGGFKEVVFAIEGNGAFSKLKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI ++N R HTS ++ V P + ++++I+ +D RIDTYRASGAGGQH+N TD Sbjct: 181 HRVQRIPETEANGRIHTSTVTVAVLP-EVEEVDVDINPNDLRIDTYRASGAGGQHINKTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SA+RITHIPTG+VV CQ +RSQ+KNK +A +LR+KLYE+ +++ I ++ K ++G Sbjct: 240 SAIRITHIPTGLVVCCQDQRSQYKNKDKAMRVLRSKLYEIAQEQQNSE--IAQARKGQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P + D R + +L+GD+D+ + A + + Sbjct: 298 TGDRSERIRTYNY-PQGRMTDHRIGLTLYKLESILEGDMDEVIDALITTDQ 347 >gi|153814377|ref|ZP_01967045.1| hypothetical protein RUMTOR_00587 [Ruminococcus torques ATCC 27756] gi|317500091|ref|ZP_07958326.1| peptide chain release factor 1 [Lachnospiraceae bacterium 8_1_57FAA] gi|331087685|ref|ZP_08336611.1| peptide chain release factor 1 [Lachnospiraceae bacterium 3_1_46FAA] gi|145848773|gb|EDK25691.1| hypothetical protein RUMTOR_00587 [Ruminococcus torques ATCC 27756] gi|316898576|gb|EFV20612.1| peptide chain release factor 1 [Lachnospiraceae bacterium 8_1_57FAA] gi|330409666|gb|EGG89102.1| peptide chain release factor 1 [Lachnospiraceae bacterium 3_1_46FAA] Length = 356 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 116/351 (33%), Positives = 192/351 (54%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ + R + + ++P + + + + LM+E+ L + E + + Sbjct: 1 MFDRLEDLLIRYEEVMGELQEPGVADDPVRFRKLMKEQSDLAPIVEAYNEYKQCRQNIED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 L + EE D + + + L + VE + L D + +E+ AGAGG Sbjct: 61 SLAMLEEESDEEMRELAKEELSDSRKRVEELEQELKILLLPKDPNDDKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY +A+ R++KTE + +++ G K +I G AY LK E GV Sbjct: 121 DEAALFAAEIYRMYVHYADSRRWKTEMISLNENGIGGFKECVFMITGQGAYSRLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ + P + +++ I E D RID RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTITVAIMP-EAEEVDVVIDEKDIRIDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+V+ Q E+SQ +NK +A+ +LR+KLY+LEL+K++ A+ E+ +++IG Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLELEKQQ--ASEAEARRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L+GDLD+ + + +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDTILNGDLDEIIDSLIAADQ 347 >gi|313667936|ref|YP_004048220.1| peptide chain release factor I [Neisseria lactamica ST-640] gi|313005398|emb|CBN86832.1| peptide chain release factor I [Neisseria lactamica 020-06] Length = 358 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 121/349 (34%), Positives = 175/349 (50%), Gaps = 8/349 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + RL + P ++ + L RE L + + + D Sbjct: 4 SILEKLQQLGDRLEEVTHLLGQPEATSDIDNYRKLTREHAELSPVVEVFQHYRRAQSDLA 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E+ + + E + + Q L D + ++EV AG GG E Sbjct: 64 DAEEMLSDPEMKDFAAEEIEAAKAKIDALDTELQKLLLPKDADDDKNIFIEVRAGTGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY+R+AE+ +++ E + ++ E G K I G AY LK E G HR Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ V P D+ +IE++ +D RIDT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGDL + A +A + Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQ 349 >gi|300690281|ref|YP_003751276.1| peptide chain release factor RF-1 [Ralstonia solanacearum PSI07] gi|299077341|emb|CBJ49966.1| peptide chain release factor RF-1 [Ralstonia solanacearum PSI07] Length = 356 Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats. Identities = 118/344 (34%), Positives = 180/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +R+ +N N+ + + L RE L+ ++ + D EL Sbjct: 5 LDQLAERIVEINALLAREDATANLDQYRKLTREHAELEPVVAQYAAWKQAEDDVATAQEL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + ++ + Q L D + +LE+ AGAGG ES +A Sbjct: 65 LADPDMKAFAEDEIRAARERMTTLEAELQRLLLPRNPNDHRNIFLEIRAGAGGDESALFA 124 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE+++++ E + + G K + G AY LK E G HR+ R+ Sbjct: 125 GDLLRMYTRYAERQRWQVELVSESASDLGGYKEVIARLVGEGAYSRLKFESGGHRVQRVP 184 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D +I+I+ +D RIDT+RASGAGGQH+N TDSAVR+TH Sbjct: 185 ATEAQGRIHTSACTVAVMPEADPLADIQINPADLRIDTFRASGAGGQHINKTDSAVRLTH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQH+NK +A +L A+L + Q+RE A + K+ IG G + Sbjct: 245 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKD--RQEREAQAKEASARKSLIGSGDRSDR 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++DGDLD+ + A A + Sbjct: 303 IRTYNF-PQGRITDHRINLTLYKIDAIMDGDLDELLGALAAEHQ 345 >gi|261493250|ref|ZP_05989777.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496507|ref|ZP_05992887.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307710|gb|EEY09033.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311100|gb|EEY12276.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 360 Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 113/344 (32%), Positives = 181/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R L D + + + + +E L+ + + D L Sbjct: 9 LESLSERHEELQALLGDASIISDQDKFRAYSKEYSQLEEVVGTFNRWKKLNNDIEEAQLL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + E + +E Q L D +A+LE+ AG GG E+ +A Sbjct: 69 LDDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+ E ++++ E + ++ E+ G K + I G YG LK E G HR+ R+ Sbjct: 129 GDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ SD RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A +L +++ ++E +++ ++ + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQ--ADTRRNLLGSGDRSDK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +V++G +D+ ++ + + Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 349 >gi|163858862|ref|YP_001633160.1| peptide chain release factor 1 [Bordetella petrii DSM 12804] gi|229470349|sp|A9IER8|RF1_BORPD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|163262590|emb|CAP44893.1| peptide chain release factor 1 [Bordetella petrii] Length = 360 Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 116/344 (33%), Positives = 180/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + RL ++ +P ++ + L RER L+ + + D E+ Sbjct: 9 LEQLSHRLIEVDALLAEPDTAADMERFRKLSRERAELEPVVQAFAQFARTEDDLATAQEM 68 Query: 76 ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D ++ ++ + + Q L D +LE+ AG GG ES ++ Sbjct: 69 LADPDMKAMAEDEIKTGRERLEKLESELQVLLLPRDPNDGRSLFLEIRAGTGGDESALFS 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY+R+AE+R ++ E + E G K I G AYG LK E G HR+ R+ Sbjct: 129 GDLLRMYSRYAEQRGWRVELMSESPSELGGYKEVIARIDGDGAYGRLKFESGAHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D +I I+ +D RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 189 ATEAQGRIHTSACTVAVMPEADAMSDIVINPADLRIDTFRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQH+NK +A +L A+L + EL++R+ + K+ +G G + Sbjct: 249 LPTGLVVECQDDRSQHRNKDKAMQVLAARLKDRELRERQ--SKEAAERKSLVGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +++GDL++ A +A + Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKLQQIMEGDLEELTGALIAEHQ 349 >gi|27379419|ref|NP_770948.1| peptide chain release factor 2 [Bradyrhizobium japonicum USDA 110] gi|27352570|dbj|BAC49573.1| peptide chain release factor 2 [Bradyrhizobium japonicum USDA 110] Length = 322 Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 199/309 (64%), Positives = 248/309 (80%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L++++S I +++ L D++ ++EL E D ++ E L+ +K EV ++ E Sbjct: 1 MQERTSLEDSLSGIGKVEQELEDDIGMIELGEAEGDDGVVAEAEAALKALKKEVARRELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D+YLEVHAGAGGTESQDWA MLLRMYTRWAE FK E LE +GEEAGI Sbjct: 61 ALLSGEADRFDSYLEVHAGAGGTESQDWAQMLLRMYTRWAETHGFKVEYLEESEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ + G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ V+PV+DDSI+I+I E Sbjct: 121 KSATIQVSGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQVFPVIDDSIKIDIKE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ RSQHKN+AQAW+MLRA+LY Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KREE A +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ + S VL+G+LDD Sbjct: 241 EMELKKREEKAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLNGELDD 300 Query: 346 FMKATLAIK 354 FM ATLA + Sbjct: 301 FMAATLAQR 309 >gi|317012016|gb|ADU82624.1| peptide chain release factor 2 [Helicobacter pylori Lithuania75] Length = 363 Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 173/352 (49%), Positives = 240/352 (68%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 13 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L ++ L ELA ++D L + ++ V+ + E +LSGE D+++A + + Sbjct: 73 KNSLDESTELFELAQNDNDEVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 193 NESGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSTKN--EE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362 >gi|169634751|ref|YP_001708487.1| peptide chain release factor 2 [Acinetobacter baumannii SDF] gi|169153543|emb|CAP02711.1| peptide chain release factor 2 [Acinetobacter baumannii] Length = 310 Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 169/307 (55%), Positives = 223/307 (72%), Gaps = 1/307 (0%) Query: 47 RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106 +E+ L+N I+ + + +L D +L+LA+E DD S+L++ L + E+ +F Sbjct: 3 KEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELSTAEEELAKLEFRR 62 Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S D N Y+E+ AG+GGTE+QDWA+MLLRMY RW E+ FK E +E+ DG+ AGIK Sbjct: 63 MFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAGIK 122 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ ++G AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+ S Sbjct: 123 SATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDINPS 182 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D R DTYRASGAGGQH+N TDSAVR+THIPTG+VV CQ +RSQH N+ AW LRAKLYE Sbjct: 183 DVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQLRAKLYE 242 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LE+QKR E A E K++IGWG QIRSYVL +KDLRT +E ++ VLDGDLD F Sbjct: 243 LEMQKRNEAAQALEDLKSDIGWGSQIRSYVLDD-SRIKDLRTGVENSNTGAVLDGDLDRF 301 Query: 347 MKATLAI 353 ++A+L Sbjct: 302 IEASLKQ 308 >gi|226528475|ref|NP_001148129.1| peptide chain release factor 2 [Zea mays] gi|195616002|gb|ACG29831.1| peptide chain release factor 2 [Zea mays] Length = 467 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 153/351 (43%), Positives = 222/351 (63%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +++ + + W ++R L E P LW++ + A + RE+ L I + + Sbjct: 107 VAQSVKVIKKRLKWGWILERTKQLAVVLEKPDLWEDPVFAGRVSREQGELMGKIKSVNQF 166 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L +++ +L LA EE+D + E+ L ++ + K+ +LLSG+ DS ++EV Sbjct: 167 EQELIEHIEMLRLAREENDNELEMESMKALADMRRSAKEKELNALLSGDNDSCSCFIEVQ 226 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA M++ MY WA++R +K +E GE AGIK AT+ + G A+G+ K Sbjct: 227 AGAGGTESMDWAAMVMNMYRSWAQRRGYKITVVEEMSGEVAGIKRATIKVDGEYAFGYAK 286 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVRISP+DS RRHTSF+++ V P+ D + +I +SD RI+ +R+ G GGQ Sbjct: 287 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDTTSRYQIKDSDLRIERFRSGGPGGQ 346 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H NTT+SA+RI HIPTG+ Q ERSQH NKA A +L+++L +LE+ ++ ++ Sbjct: 347 HANTTESAIRIVHIPTGISATSQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNAEHTQ 406 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 S EI WG QIRSYVL PY+MVKDLRTN E + P VL+GDLDDF+ L+ Sbjct: 407 SLNEISWGNQIRSYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDDFILNYLS 457 >gi|319410939|emb|CBY91334.1| peptide chain release factor I (RF-1) [Neisseria meningitidis WUE 2594] Length = 358 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 122/349 (34%), Positives = 175/349 (50%), Gaps = 8/349 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + RL + P ++ + L RE L + + Q D Sbjct: 4 SILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQSDLA 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E+ + + E + + Q L D + ++EV AG GG E Sbjct: 64 DAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEVRAGTGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY+R+AE+ +++ E + ++ E G K I G AY LK E G HR Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ V P D+ +IE++ +D RIDT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGDL + A +A + Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQ 349 >gi|307243612|ref|ZP_07525755.1| peptide chain release factor 2 [Peptostreptococcus stomatis DSM 17678] gi|306492981|gb|EFM64991.1| peptide chain release factor 2 [Peptostreptococcus stomatis DSM 17678] Length = 348 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 157/346 (45%), Positives = 226/346 (65%), Gaps = 3/346 (0%) Query: 12 GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN-- 69 FD R + + W++ ++ +++E + ++ ++ ++ + D Sbjct: 2 SHFDLKGLESRKVDIEKLMAEQDFWEDTDKSNKILQENKTIEVRLTQYSQLITSIEDINI 61 Query: 70 -LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 L L E E+D I D ++ + ++ E L SG+ DSN+A L V++G GG Sbjct: 62 LLELSEEDSTEEDQEIENSIIDQVKDARENLDRMTMEMLFSGQYDSNNAILSVNSGTGGL 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 ++QDWA MLLRMY RW+E +K + ++I+ EAGIK+AT+L++G NAYG LK E+GVH Sbjct: 122 DAQDWAQMLLRMYIRWSESSGYKVKLIDINSDPEAGIKTATILVQGQNAYGHLKSEKGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVRISP+DS+ +RHTSF+SI V P +++ I++EI+++D +IDTYR+SGAGGQHVNTTDS Sbjct: 182 RLVRISPFDSSGKRHTSFASIDVVPELNEDIKVEINQTDLKIDTYRSSGAGGQHVNTTDS 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITHIPTG+VVQCQ ERSQH NK A +L AKL +L+ ++ +E + ++I W Sbjct: 242 AVRITHIPTGIVVQCQNERSQHSNKDIAMKLLMAKLIQLKEEENKERIEDLQGKYSQITW 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 G QIRSYV QPY++VKD RTN E + V+DG LD+FM L K Sbjct: 302 GSQIRSYVFQPYKLVKDHRTNEENANVDAVMDGKLDNFMFEYLKQK 347 >gi|219887937|gb|ACL54343.1| unknown [Zea mays] Length = 467 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 153/351 (43%), Positives = 222/351 (63%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +++ + + W ++R L E P LW++ + A + RE+ L I + + Sbjct: 107 VAQSVKVIKKRLKWGWILERTKQLAVVLEKPDLWEDPVFAGRVSREQGELMGKIKSVNQF 166 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L +++ +L LA EE+D + E+ L ++ + K+ +LLSG+ DS ++EV Sbjct: 167 EQELIEHIEMLRLAREENDNELEMESMKALADMRRSAKEKELNALLSGDNDSCSCFIEVQ 226 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA M++ MY WA++R +K +E GE AGIK AT+ + G A+G+ K Sbjct: 227 AGAGGTESMDWAAMVMNMYRSWAQRRGYKITVVEEMSGEVAGIKRATIKVDGEYAFGYAK 286 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVRISP+DS RRHTSF+++ V P+ D + +I +SD RI+ +R+ G GGQ Sbjct: 287 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDTTSRYQIKDSDLRIERFRSGGPGGQ 346 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H NTT+SA+RI HIPTG+ Q ERSQH NKA A +L+++L +LE+ ++ ++ Sbjct: 347 HANTTESAIRIVHIPTGISATSQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNAEHTQ 406 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 S EI WG QIRSYVL PY+MVKDLRTN E + P VL+GDLDDF+ L+ Sbjct: 407 SLNEISWGNQIRSYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDDFILNYLS 457 >gi|254805442|ref|YP_003083663.1| peptide chain release factor 1 [Neisseria meningitidis alpha14] gi|254668984|emb|CBA07320.1| peptide chain release factor 1 [Neisseria meningitidis alpha14] Length = 358 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 121/349 (34%), Positives = 175/349 (50%), Gaps = 8/349 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + RL + P ++ + L RE L + + Q D Sbjct: 4 SILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQSDLA 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E+ + + E + + Q L D + ++E+ AG GG E Sbjct: 64 DAEEMLSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEIRAGTGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY+R+AE+ +++ E + ++ E G K I G AY LK E G HR Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ V P D+ +IE++ D RIDT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGDL++ A +A + Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQ 349 >gi|254362308|ref|ZP_04978420.1| peptide chain release factor RF1 [Mannheimia haemolytica PHL213] gi|153093888|gb|EDN74816.1| peptide chain release factor RF1 [Mannheimia haemolytica PHL213] Length = 360 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 113/344 (32%), Positives = 181/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R L D + + + + +E L+ + + D L Sbjct: 9 LESLSERHEELQALLGDASIISDQDKFRAYSKEYSQLEEVVGTFNRWKKLNNDIEEAQLL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + E + +E Q L D +A+LE+ AG GG E+ +A Sbjct: 69 LDDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+ E ++++ E + ++ E+ G K + I G YG LK E G HR+ R+ Sbjct: 129 GDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ SD RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A +L +++ ++E +++ ++ + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQ--ADTRRNLLGSGDRSDK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +V++G +D+ ++ + + Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 349 >gi|160893851|ref|ZP_02074634.1| hypothetical protein CLOL250_01405 [Clostridium sp. L2-50] gi|156864503|gb|EDO57934.1| hypothetical protein CLOL250_01405 [Clostridium sp. L2-50] Length = 358 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 126/351 (35%), Positives = 197/351 (56%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ V RL LN + DP + + + + LM+E+ L + KE +D Sbjct: 1 MFDKLEDLVDRLDTLNNQLTDPDIVSDQNKFRKLMKEQSELTPIVEKYKEYKDAKQTIED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 L + EE+D + + + L K VE + L DS + +E+ AGAGG Sbjct: 61 SLLMLEEENDEELREMAKEELNEAKATVEKTENELKILLLPKDPNDSKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY ++ ++ K+K E + +++ G K A +I G AY +K E GV Sbjct: 121 DEAALFAYEIYRMYQKYVDQFKWKVELMSVNENGIGGFKEAVFMITGDGAYSKMKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +S R HTS ++ V P + +++EI+E+D RID RASG GGQ VNTTD Sbjct: 181 HRVQRIPKTESGGRIHTSTVTVAVMP-EAEEVDVEINENDIRIDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V+ Q E+SQ +NKA+A+ +LR+KLY++ELQK+ + K++IG Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQLQNKAKAFALLRSKLYDMELQKQHD--AEAADRKSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L+GDL++ + + +A + Sbjct: 298 TGDRSEKIRTYNF-PEGRVTDHRIKLTLYKLEQILNGDLNEIIDSLIAADQ 347 >gi|197302438|ref|ZP_03167493.1| hypothetical protein RUMLAC_01166 [Ruminococcus lactaris ATCC 29176] gi|197298336|gb|EDY32881.1| hypothetical protein RUMLAC_01166 [Ruminococcus lactaris ATCC 29176] Length = 339 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 149/329 (45%), Positives = 223/329 (67%), Gaps = 1/329 (0%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 + E+P W N ++ +M+E + L +++ I+++ D L+L++++ ED+ Sbjct: 2 EKRLEEPGFWDNPEVSQQVMKELKGLQDSVKEIEKLYTDYEDMLLLIDMSAGEDEEEETA 61 Query: 87 ETSDNL-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E Q+ + E + +LL G D ++A + +HAGAGGTE+ DW ML RMY+RWA Sbjct: 62 EEVAEELQQFEAVFEQLRISTLLIGPYDRDNAIVTLHAGAGGTEAMDWTGMLYRMYSRWA 121 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 EK+ ++ E L+ +G+ AGIK T +KG NAYG+L+ E+GVHRLVRISP+++ +R TS Sbjct: 122 EKKGYELEVLDYLEGDVAGIKGVTFEVKGENAYGYLRSEKGVHRLVRISPFNAAGKRQTS 181 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S V P +++ I+IEI+E + RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ Sbjct: 182 FASCDVIPDIEEDIDIEINEDELRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQN 241 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQH NK +A ML++KL L+ Q++ E + ++I +G QIRSYV+QPY MVKD Sbjct: 242 ERSQHMNKDKAMQMLKSKLLLLKQQEQAEKMSDIRGEVSDINFGNQIRSYVMQPYTMVKD 301 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 RTN E ++ V+DG++D F+ A L++ Sbjct: 302 HRTNAEISNVGAVMDGNIDPFINAYLSMD 330 >gi|329119839|ref|ZP_08248513.1| peptide chain release factor RF1 [Neisseria bacilliformis ATCC BAA-1200] gi|327463995|gb|EGF10306.1| peptide chain release factor RF1 [Neisseria bacilliformis ATCC BAA-1200] Length = 362 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 119/349 (34%), Positives = 178/349 (51%), Gaps = 8/349 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + D N RL + P ++ + L +E L + + D Sbjct: 8 SILDKLQNLAHRLEEVTALLGSPEAVADMDNYRRLNQEHAELTPVVETYRAYTRAQSDLA 67 Query: 71 ILLELALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E+ + D E ++ + Q L D + ++E+ AG GG E Sbjct: 68 DAQEMLSDPDMKDFAAEETEAAKAKIDALDLELQKLLLPKDADDDKNIFIEIRAGTGGDE 127 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY+R+AE+ +++ E + ++ + G K + + G AY LK E G HR Sbjct: 128 AALFAGDLLRMYSRYAERNRWQVEIVSANESDLGGYKEVIVRLIGLGAYSKLKFESGGHR 187 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ V P D+ +IE++ +D RIDT+RASGAGGQH+N TDSA Sbjct: 188 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 247 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G Sbjct: 248 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 305 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGD+++ A +A + Sbjct: 306 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDMEEITAALIAEHQ 353 >gi|226323866|ref|ZP_03799384.1| hypothetical protein COPCOM_01641 [Coprococcus comes ATCC 27758] gi|225207415|gb|EEG89769.1| hypothetical protein COPCOM_01641 [Coprococcus comes ATCC 27758] Length = 358 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 118/351 (33%), Positives = 191/351 (54%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ + R + + ++P + + + LM+E+ L + KE ++ + Sbjct: 1 MFDKLEDLLIRYEEIMGELQEPDVVNDQSRFRKLMKEQNDLTPIVEAYKEYKNCKQNIED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 L L EE D + + + L K VE + L D + +E+ AGAGG Sbjct: 61 SLSLLEEESDEEMKELAKEELSESKKRVEELEQELKILLLPKDPNDDKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY +A+ R++KTE + +++ G K +I G AY +K E GV Sbjct: 121 DEAALFAAEIYRMYVHYADSRRWKTEMISLNENGIGGFKEVVFMITGQGAYSRMKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P + +++ I E D RID RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMP-EAEEVDVVIDEKDIRIDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+V+ Q E+SQ +NK +A+ +LR+KLYELEL+K+ + E+ +++IG Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQ--HSAEAEARRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++GDLD+ + + +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSIMNGDLDEVIDSLIAADQ 347 >gi|167038490|ref|YP_001666068.1| peptide chain release factor 1 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116886|ref|YP_004187045.1| peptide chain release factor 1 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|238687641|sp|B0K7G6|RF1_THEP3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166857324|gb|ABY95732.1| peptide chain release factor 1 [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929977|gb|ADV80662.1| peptide chain release factor 1 [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 356 Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats. Identities = 121/346 (34%), Positives = 193/346 (55%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL---IL 72 R L+ K DP++ NV E + ++E +++ + +E + L D L Sbjct: 5 LQAIEDRYVDLSQKISDPNIISNVAEWRKYVKEHAAIEDIVLKYREYKKVLEDIEATKEL 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L EE +E S ++ + +E + + D + +E+ AGAGG E+ Sbjct: 65 LSSNDEELKEMAEEELSQLEEKKEKLLEEIKILLIPKDPNDEKNVIMEIRAGAGGEEAAL 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A+ L RMY+ +AEK+ +K E + ++ + G K L I G +Y LK E GVHR+ R Sbjct: 125 FAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGSYSRLKYESGVHRVQR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ V P + +++EI+ +D +ID +R+ G GGQ VNTTDSAVR+ Sbjct: 185 VPTTEAGGRIHTSTATVAVLP-EVEEVDVEINPNDIKIDVFRSGGHGGQSVNTTDSAVRV 243 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV CQ ERSQ +N+ +A +LRAKLYE+ LQ+++ I E+ K+++G G Sbjct: 244 THIPTGIVVTCQDERSQIQNRERALKILRAKLYEMALQEQQ--REIAETRKSQVGTGERS 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +VLDGDLD+ + A + + Sbjct: 302 ERIRTYNF-PQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALILNDQ 346 >gi|163759373|ref|ZP_02166459.1| peptide chain release factor 2 [Hoeflea phototrophica DFL-43] gi|162283777|gb|EDQ34062.1| peptide chain release factor 2 [Hoeflea phototrophica DFL-43] Length = 321 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 226/309 (73%), Positives = 263/309 (85%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ L+++I+ +K + +L DNL L+E+ EE D I++E L+ ++ +V +Q E Sbjct: 1 MRERQQLEDSINGLKRTEAQLSDNLELIEMGEEEGDSDIVREAEAALKELRADVTKQQIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD+ND YLEVH+GAGGTESQDWANMLLRMYTRWAE+ K E LEIHDGEEAGI Sbjct: 61 SLLSGEADANDTYLEVHSGAGGTESQDWANMLLRMYTRWAERSGMKVELLEIHDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLLIKG NAYGWLK E GVHRLVRISPYDS +RRHTSFSSIW YPV+DDSI+++I+E Sbjct: 121 KSATLLIKGHNAYGWLKTESGVHRLVRISPYDSQARRHTSFSSIWTYPVIDDSIDVDINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 S+CRIDTYRASGAGGQHVNTTDSAVRITHIPTG+VVQCQQERSQHKN+A+AW+MLRA++Y Sbjct: 181 SECRIDTYRASGAGGQHVNTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDMLRARIY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE AN +SKTEIGWG QIRSYVLQPYQ+VKDLRT E TSP DVLDG LD Sbjct: 241 EAELKKREEAANDEAASKTEIGWGHQIRSYVLQPYQLVKDLRTGTESTSPQDVLDGKLDP 300 Query: 346 FMKATLAIK 354 FM+A LA + Sbjct: 301 FMEAALAQR 309 >gi|317013590|gb|ADU81026.1| peptide chain release factor 2 [Helicobacter pylori Gambia94/24] Length = 363 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 174/352 (49%), Positives = 242/352 (68%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 13 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L +++ L ELA ++D L + ++ V+ + E +LSGE D+++A + + Sbjct: 73 KNSLDESVELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSTKN--EE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+NI ++ +LDGD+D ++ L K Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362 >gi|332969013|gb|EGK08053.1| peptide chain release factor RF1 [Kingella kingae ATCC 23330] Length = 375 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 119/349 (34%), Positives = 179/349 (51%), Gaps = 8/349 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + D RL + P N+ + L +E L + ++ + D Sbjct: 21 SILDKLQTLADRLEEVTALLGSPEATANMDTYRKLNQEHAELTPIVETYQQYRQAESDLT 80 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E+ + D E + + + Q L D + ++E+ AG GG E Sbjct: 81 DAQEMLSDPDMKEFAAEEIEATKIKIEQLDFELQKLLLPKDADDDKNIFIEIRAGTGGDE 140 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY+R+AE+ +++TE + + + G K + + G AY LK E G HR Sbjct: 141 AALFAGDLLRMYSRFAERNRWQTEIVSASESDLGGYKEVIVRLIGLGAYSKLKFESGGHR 200 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ V P D+ EI+++ +D RIDT+RASGAGGQH+N TDSA Sbjct: 201 VQRVPATESQGRIHTSACTVAVMPEADELEEIQLNPNDLRIDTFRASGAGGQHINKTDSA 260 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 +RITH+PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G Sbjct: 261 IRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDK--QKREAQAKEAAERKSLIGSG 318 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGD+++ A +A + Sbjct: 319 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDMEEITSALIAEHQ 366 >gi|332703829|ref|ZP_08423917.1| peptide chain release factor 2 [Desulfovibrio africanus str. Walvis Bay] gi|332553978|gb|EGJ51022.1| peptide chain release factor 2 [Desulfovibrio africanus str. Walvis Bay] Length = 368 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 154/350 (44%), Positives = 219/350 (62%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L G D D +RL + P W +++E++ + + + Sbjct: 13 QLLDSYESLWGRLDHDRDNERLRQIEDALSRPGAWDKPDRLTPMLQEKRQISEKLERLTV 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + L+LA E+ +L S+ L ++ ++ + +L+G D N A +E+ Sbjct: 73 LHKTRQEVEEWLDLAREDQTQEVLAILSEQLDVLQERLKDVELREMLAGPEDQNSAIMEI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H+GAGGTE+QDWA MLLRMY RW+E++ +K L+ +GEEAG KS T+ ++G AYG L Sbjct: 133 HSGAGGTEAQDWAEMLLRMYRRWSERQGYKVSILDFLEGEEAGFKSVTVQVEGLYAYGML 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE G+HRL+RISP+D++ RRHTSF+S+ VYP V I+I++ E D RID +RASGAGGQ Sbjct: 193 KGESGIHRLIRISPFDTSGRRHTSFASVAVYPDVGTDIDIDVREEDLRIDVFRASGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITH+PTGVV QCQ E+SQ +NK A +L+A+LYELEL+K Sbjct: 253 HVNKTESAVRITHLPTGVVAQCQNEKSQLRNKETALKILKARLYELELKKIAAARQAEYE 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 SK I WG QIR+Y LQPY++VKD RT +E VL+G++D ++ L Sbjct: 313 SKDTIAWGSQIRTYTLQPYRLVKDHRTGMEIGDVEAVLNGEIDPLIRNFL 362 >gi|261399946|ref|ZP_05986071.1| peptide chain release factor 1 [Neisseria lactamica ATCC 23970] gi|269210396|gb|EEZ76851.1| peptide chain release factor 1 [Neisseria lactamica ATCC 23970] Length = 358 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 121/349 (34%), Positives = 175/349 (50%), Gaps = 8/349 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + RL + P ++ + L RE L + + + D Sbjct: 4 SILEKLQQLGDRLEEVTHLLGQPEATSDIDNYRKLTREHAELTPVVEVFQNYRLAQSDLA 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E+ + + E + + Q L D + ++EV AG GG E Sbjct: 64 DAEEMLSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEVRAGTGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY+R+AE+ +++ E + ++ E G K I G AY LK E G HR Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ V P D+ +IE++ +D RIDT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGDL + A +A + Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQ 349 >gi|217031931|ref|ZP_03437433.1| hypothetical protein HPB128_3g50 [Helicobacter pylori B128] gi|298736886|ref|YP_003729416.1| peptide chain release factor RF-2 [Helicobacter pylori B8] gi|216946400|gb|EEC25005.1| hypothetical protein HPB128_3g50 [Helicobacter pylori B128] gi|298356080|emb|CBI66952.1| peptide chain release factor RF-2 [Helicobacter pylori B8] Length = 363 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 174/352 (49%), Positives = 242/352 (68%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 13 LQNKCDNIALIIKPEKIKQELGRIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L +++ L ELA ++D L + ++ V+ + E +LSGE D+++A + + Sbjct: 73 KNSLDESVELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 193 NESGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ A Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+N ++ +LDGD+D ++ L K Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362 >gi|153854560|ref|ZP_01995830.1| hypothetical protein DORLON_01825 [Dorea longicatena DSM 13814] gi|149752869|gb|EDM62800.1| hypothetical protein DORLON_01825 [Dorea longicatena DSM 13814] Length = 312 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 154/307 (50%), Positives = 215/307 (70%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+E ++L + I + D +L+E+ E++D ++++E + + + E + + Sbjct: 1 MKELKNLKELVETIHGLYTSYEDINLLIEMGYEDEDPAMVKELEEEIHTFEKVFEKLKIQ 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGE D+ +A + +HAGAGGTES DWA ML RMY RWAE++ F + L+ DG+ AGI Sbjct: 61 TLLSGEYDACNAIMTIHAGAGGTESCDWAGMLYRMYCRWAERKGFSLQVLDFLDGDIAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ T +KG NAYG+LK E+GVHRLVRISP++S +R TSF+S V P ++D I+IEI E Sbjct: 121 KAVTFEVKGENAYGYLKSEKGVHRLVRISPFNSAGKRQTSFASCDVLPDLEDDIDIEIDE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D +IDTYRASGAGGQHVN T SA+RITH+PTG+VVQCQ ERSQH NK +A ML+AKL Sbjct: 181 DDLKIDTYRASGAGGQHVNKTSSAIRITHLPTGIVVQCQNERSQHHNKEKAMQMLKAKLQ 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ++ Q++ E + +IG+G QIRSYV+QPY +VKD RTN E ++ + V+DGD+D Sbjct: 241 LMKEQEQAEKVSDIRGEVKDIGFGNQIRSYVMQPYTLVKDHRTNEENSNVNAVMDGDIDS 300 Query: 346 FMKATLA 352 F+ A L Sbjct: 301 FINAYLK 307 >gi|240950074|ref|ZP_04754376.1| peptide chain release factor 1 [Actinobacillus minor NM305] gi|240295449|gb|EER46204.1| peptide chain release factor 1 [Actinobacillus minor NM305] Length = 360 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 115/344 (33%), Positives = 185/344 (53%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R L D + + + + +E L+ +S + D L Sbjct: 9 LESLSERHEELQALLGDATIINDQDKFRAYSKEYAQLEEVVSTFNRWKKLHSDIEEAQIL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + E + + ++E Q L D + +LE+ AG GG E+ +A Sbjct: 69 LDDPDMKDMAAEEIEENKAEIEQLEQNLQILLLPKDPNDEYNCFLEIRAGTGGDEAGIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE ++++ E L ++ E+ G K + I G YG LK E G HR+ R+ Sbjct: 129 GDLYRMYSRYAEGKRWRIEELSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A +L +++ ++E +K+ + ++ + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKALAVLASRIVQVEKEKQAQEQ--ADTRRNLLGSGDRSDK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +V++G +D+ ++ + + Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 349 >gi|121635327|ref|YP_975572.1| peptide chain release factor 1 [Neisseria meningitidis FAM18] gi|166223577|sp|A1KV95|RF1_NEIMF RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|120867033|emb|CAM10796.1| peptide chain release factor I [Neisseria meningitidis FAM18] gi|325132818|gb|EGC55498.1| peptide chain release factor 1 [Neisseria meningitidis M6190] gi|325138721|gb|EGC61273.1| peptide chain release factor 1 [Neisseria meningitidis ES14902] gi|325198784|gb|ADY94240.1| peptide chain release factor 1 [Neisseria meningitidis G2136] Length = 358 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 120/349 (34%), Positives = 175/349 (50%), Gaps = 8/349 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + RL + P ++ + L RE L + + + D Sbjct: 4 SILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQSDLA 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E+ + + E + + Q L D + ++E+ AG GG E Sbjct: 64 DAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIRAGTGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY+R+AE+ +++ E + ++ E G K I G AY LK E G HR Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ V P D+ +IE++ +D RIDT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGDL + A +A + Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQ 349 >gi|167038767|ref|YP_001661752.1| peptide chain release factor 1 [Thermoanaerobacter sp. X514] gi|300913648|ref|ZP_07130965.1| peptide chain release factor 1 [Thermoanaerobacter sp. X561] gi|307723337|ref|YP_003903088.1| peptide chain release factor 1 [Thermoanaerobacter sp. X513] gi|238687578|sp|B0K1F7|RF1_THEPX RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166853007|gb|ABY91416.1| peptide chain release factor 1 [Thermoanaerobacter sp. X514] gi|300890333|gb|EFK85478.1| peptide chain release factor 1 [Thermoanaerobacter sp. X561] gi|307580398|gb|ADN53797.1| peptide chain release factor 1 [Thermoanaerobacter sp. X513] Length = 356 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 120/346 (34%), Positives = 193/346 (55%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL---IL 72 R L+ K DP++ NV E + ++E +++ + +E + L D L Sbjct: 5 LQAIEDRYVELSQKISDPNIISNVNEWRKYVKEHAAIEDIVLKYREYKKVLEDIEATKEL 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L EE +E S ++ + +E + + D + +E+ AGAGG E+ Sbjct: 65 LSSNDEELKEMAEEELSQLEEKKEKLLEEIKILLIPKDPNDEKNVIMEIRAGAGGEEAAL 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A+ L RMY+ +AEK+ +K E + ++ + G K L I G +Y LK E GVHR+ R Sbjct: 125 FAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGSYSRLKYESGVHRVQR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ V P + +++EI+ +D ++D +R+ G GGQ VNTTDSAVR+ Sbjct: 185 VPTTEAGGRIHTSTATVAVLP-EVEEVDVEINPNDIKVDVFRSGGHGGQSVNTTDSAVRV 243 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV CQ ERSQ +N+ +A +LRAKLYE+ LQ+++ I E+ K+++G G Sbjct: 244 THIPTGIVVTCQDERSQIQNRERALKILRAKLYEMALQEQQ--REIAETRKSQVGTGERS 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +VLDGDLD+ + A + + Sbjct: 302 ERIRTYNY-PQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALILNDQ 346 >gi|301335943|ref|ZP_07224187.1| peptide chain release factor 2 [Chlamydia trachomatis L2tet1] Length = 334 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 155/326 (47%), Positives = 205/326 (62%), Gaps = 1/326 (0%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 + W +V A + L +S E+++++ LE D + + Sbjct: 2 EQQAVQDGFWDDVARAGKISERIARLKQQLSEFNELKNKVSTIQFFLEDEESSKDLEMQK 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E + ++ + LLSGE D N +L ++AGAGGTES DW M+LRMY RWA Sbjct: 62 ELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMVLRMYMRWAS 121 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 ++ E ++ DGE AGIK TL + G AYG+ K E GVHRLVRISP+DSN++RHTSF Sbjct: 122 SHSWRVEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSF 181 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S+ V+P +DD IE+EI D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ E Sbjct: 182 ASVEVFPEIDDKIEVEIHPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNE 241 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQ +N+ NMLRA++Y+ LQ+R E NI +K EI WG QIR+YV QPY +VKD+ Sbjct: 242 RSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDV 301 Query: 327 RTNIEKTSPSDVLDGD-LDDFMKATL 351 RT E + ++DG+ LD F+KA L Sbjct: 302 RTGYEVGNIQAMMDGELLDAFIKAYL 327 >gi|309378429|emb|CBX22924.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 358 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 120/349 (34%), Positives = 174/349 (49%), Gaps = 8/349 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + RL + P ++ + L RE L + + + D Sbjct: 4 SILEKLQQLGDRLEEVTHLLGQPEATSDIDNYRKLTREHAELSPVVEVFQHYRRAQSDLA 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E+ + + E + + Q L D + ++EV AG GG E Sbjct: 64 DAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEVRAGTGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY+R+AE+ +++ E + ++ E G K I G AY LK E G HR Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ V P D+ +IE++ +D RIDT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV+CQ RSQH NKAQA +L A+L + QK E A K+ IG G Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKHEAQAKEAAERKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGDL + A +A + Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQ 349 >gi|325128768|gb|EGC51631.1| peptide chain release factor 1 [Neisseria meningitidis N1568] Length = 358 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 120/349 (34%), Positives = 176/349 (50%), Gaps = 8/349 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + RL + P ++ + L RE L + + + D Sbjct: 4 SILEKLQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAELSPVVEVFQHYRRAQSDLA 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E+ + + E + + Q L D + ++E+ AG GG E Sbjct: 64 DAEEMLSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEIRAGTGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY+R+AE+ +++ E + ++ E G K I G AY LK E G HR Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ V P D+ +IE++ +D RIDT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGDL++ A +A + Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQ 349 >gi|284929451|ref|YP_003421973.1| peptide chain release factor 2 [cyanobacterium UCYN-A] gi|284809895|gb|ADB95592.1| bacterial peptide chain release factor 2 (bRF-2) [cyanobacterium UCYN-A] Length = 344 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 144/335 (42%), Positives = 214/335 (63%), Gaps = 1/335 (0%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 + L T P+ W N A+ + +E + + + + ++L D I+++L + Sbjct: 3 ALQASIKDLENTTIQPNFWDNPETAQKISQELSNFKSQLDQYHQWYNKLEDTKIIMDLLI 62 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 ++D S+L+E +N+ ++K ++ + LLSG D A L ++ G GGT++QDW+ ML Sbjct: 63 LDNDKSLLEEAQNNITQLKKNLDNWDLQQLLSGTYDIKGAILNINTGVGGTDAQDWSEML 122 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 LRMY RW E + +K +EI +G+EAGIKSATL +G A+G+LKGE+G HRLVRISP++ Sbjct: 123 LRMYRRWGESQGYKVNLVEISEGDEAGIKSATLEFEGCYAFGYLKGEKGTHRLVRISPFN 182 Query: 198 SNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +N +R TSF+ I V P + I++EI + D I T R+ G GGQ+VN ++AVRI H+P Sbjct: 183 ANGKRQTSFTGIEVMPKLEGNDIKVEIPDKDLEITTTRSGGKGGQNVNKVETAVRIVHLP 242 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316 TG+ V+C QERSQ +NK +A +L+AKL + ++R + E WG QIRSYV Sbjct: 243 TGISVRCTQERSQLQNKEKALILLKAKLLIIAQEQRAKKIAEIRGDIVEAAWGNQIRSYV 302 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 PYQMVKDLRTN+E T+ +DV+DGDL F++A L Sbjct: 303 FHPYQMVKDLRTNVETTNINDVMDGDLGLFIEAYL 337 >gi|291550093|emb|CBL26355.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus torques L2-14] Length = 356 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 116/351 (33%), Positives = 190/351 (54%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ V R + + ++P + + + LM+E+ L + +E + + Sbjct: 1 MFDRLEDLVIRYQEVMGELQEPDVANDPERFRKLMKEQSDLAPIVEAYQEYKKCKQNVEE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 L + EE D + + + L K +E + L D + +E+ AGAGG Sbjct: 61 SLMILEEESDEEMRELAKEELNESKARIEELEQELKILLLPKDPNDDKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY +A+ R++KTE + +++ G K +I G AY +K E GV Sbjct: 121 DEAALFAAEIYRMYVHYADSRRWKTEMISLNENGIGGFKECVFMITGQGAYSRMKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P + +++ I E D RID RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMP-EAEEVDVVIDEKDIRIDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+V+ Q E+SQ +NK +A+ +LR+KLY+LEL+K++ A+ +++IG Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLELEKKQ--ASEAAERRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L+GDLD+ + + +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSILNGDLDEVIDSLIAADQ 347 >gi|295109135|emb|CBL23088.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus obeum A2-162] Length = 358 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 119/351 (33%), Positives = 191/351 (54%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ + R + + +P + N + LM+E+ L + KE ++ Sbjct: 1 MFDKLEDLLVRFEEVLNELGEPGVTDNQDRFQKLMKEQSELQPIVDTYKEYKENKETIQD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L + EE D + + + L K + + L DS + +E+ AGAGG Sbjct: 61 SLSMLEEEKDEEMREMLKEELSDAKKRVEELEKELKILLLPKDPNDSKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY ++AE R++KTE + +++ G K T +I+G AY LK E GV Sbjct: 121 DEAALFAAEIYRMYVKYAESRRWKTEMMSLNENGIGGFKEVTFMIQGQGAYSRLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ + P + I+ + +DC+ D +RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTCTVAIMP-EAEEIDFHLDMNDCKFDVFRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V+ CQ E+SQ KNK +A +LR++LYE+EL K+ + E+ +++IG Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYEMELAKQHD--AEAEARRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L GDLD+ + + +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHRLDAILGGDLDEILDSLIAADQ 347 >gi|255535765|ref|YP_003096136.1| Peptide chain release factor 2 [Flavobacteriaceae bacterium 3519-10] gi|255341961|gb|ACU08074.1| Peptide chain release factor 2 [Flavobacteriaceae bacterium 3519-10] Length = 370 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 149/351 (42%), Positives = 229/351 (65%), Gaps = 2/351 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + ++ L + +S KT P W +A++ M++ + ++ +EI Sbjct: 11 NSRIADLYKYLQIEKKKIEISNDEEKTLSPEFWDKPKDAEIFMKQLRSKKKWVTDYEEIF 70 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 RL D +L+E A +D +E + + ++E +F+++LS E D A L++ A Sbjct: 71 SRLEDIQVLMEFAK--EDPDSEKELDEAFPVLLEKIEDLEFKNMLSNEGDELSAVLQITA 128 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTES DWA+ML+RMYT WAEK+ +K L +G+ AGIK+ TL I G A+G+L+G Sbjct: 129 GAGGTESCDWASMLMRMYTMWAEKQGYKLRELNYQEGDVAGIKTVTLEIDGEFAFGYLRG 188 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVRISP+DSN++RHTSF S++VYP+VDD+IEI I+ +D +T R+SGAGGQ+V Sbjct: 189 ENGVHRLVRISPFDSNAKRHTSFVSVYVYPLVDDTIEININPADISFETMRSSGAGGQNV 248 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N ++AVR+ H PTG++++ + RSQ +NK +A +LR++LYE+EL++R + N E+ K Sbjct: 249 NKVETAVRLRHAPTGIIIENSESRSQLQNKEKAMQLLRSRLYEMELEERMKARNEIEAGK 308 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +I WG QIR+YV+ PY++VKD+R+ E + V++G+L F+KA L Sbjct: 309 MKIEWGSQIRNYVMHPYKLVKDVRSGHETSDVDAVMNGELTPFLKAFLMSD 359 >gi|251792741|ref|YP_003007467.1| peptide chain release factor 1 [Aggregatibacter aphrophilus NJ8700] gi|247534134|gb|ACS97380.1| peptide chain release factor 1 [Aggregatibacter aphrophilus NJ8700] Length = 360 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 113/344 (32%), Positives = 179/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R L D + + + + +E L++ + + L Sbjct: 9 LESLKERYEELEALLGDASVISDQDKFRAYSKEYSQLEDVVKCFNRWNQLNSNLEEAKIL 68 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q + + + Q L D + YLE+ AG GG E+ +A Sbjct: 69 LDDPEMKEMAQMEIEESEAELTEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE ++++ E L ++ E+ G K L+ G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAELKRWRVEVLSENESEQGGFKEIIALVSGDGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ SD RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPSDLRIDTYRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A ++L ++L + E K + ++ + +G G + Sbjct: 249 IPTGMVVECQDERSQHKNKAKALSVLASRLVQQEQDKLAQEQ--ADTRRNLLGSGDRSDK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +V++G +D+ ++ + + Sbjct: 307 IRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQPIITEYQ 349 >gi|297571771|ref|YP_003697545.1| peptide chain release factor 2 [Arcanobacterium haemolyticum DSM 20595] gi|296932118|gb|ADH92926.1| peptide chain release factor 2 [Arcanobacterium haemolyticum DSM 20595] Length = 376 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 140/359 (38%), Positives = 217/359 (60%), Gaps = 7/359 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L R + + + D +++ L ++ P LW + +A+ + + H + + + + Sbjct: 11 ELRRSYSQIEAVTDVTALQTKIADLTEQSGAPDLWDDPEKAQGVTSQLSHAQSELDRVVK 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETS------DNLQRIKLEVEYKQFESLLSGEADSN 115 + +R+ D L ++A+EE + L+R++ ++ + ++LLSGE D Sbjct: 71 MGERVADLETLYDMAVEESESDAAMGAELFAEVDGELERVRTDLSELEIKTLLSGEYDER 130 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 DA + + +GAGG ++ DWA ML RMY RWAE+R +KT+ ++ EEAGIKS T + P Sbjct: 131 DAVVTIRSGAGGVDAADWAQMLQRMYLRWAERRGYKTKVMDTSYAEEAGIKSTTFEVSAP 190 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 AYG L E G HRLVRISP+D+ RR TSF+++ V P+++ + I+I ES+ +ID +R+ Sbjct: 191 YAYGTLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIETTDHIDIPESELKIDVFRS 250 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQ VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L + ++ I Sbjct: 251 SGPGGQSVNTTDSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLQSRLLQKRHEEEAAI 310 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD+D F+ A + + Sbjct: 311 KKELAGD-VKGAWGDQMRSYVLHPYQMVKDLRTGFEVGNTESVFDGDIDGFIDAGIRWR 368 >gi|210134369|ref|YP_002300808.1| peptide chain release factor 2 [Helicobacter pylori P12] gi|238054483|sp|B6JPR7|RF2_HELP2 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|210132337|gb|ACJ07328.1| peptide chain release factor RF-2 [Helicobacter pylori P12] Length = 363 Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats. Identities = 175/352 (49%), Positives = 242/352 (68%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 13 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 +D L +++ L ELA ++D L + ++ V+ + E +LSGE D+++A + + Sbjct: 73 KDSLDESVELFELAQNDNDEVTLSLLYEEAPTLEHSVQKVEIEIMLSGENDASNAIITIQ 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A ML++KLYELEL+K++ Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQNSTKN--EE 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+NI ++ +LDGD+D ++ L K Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362 >gi|283798430|ref|ZP_06347583.1| peptide chain release factor 1 [Clostridium sp. M62/1] gi|291073835|gb|EFE11199.1| peptide chain release factor 1 [Clostridium sp. M62/1] gi|295090782|emb|CBK76889.1| bacterial peptide chain release factor 1 (bRF-1) [Clostridium cf. saccharolyticum K10] gi|295115024|emb|CBL35871.1| bacterial peptide chain release factor 1 (bRF-1) [butyrate-producing bacterium SM4/1] Length = 358 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 119/351 (33%), Positives = 195/351 (55%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D+ + R L + +P++ ++ + + LM+E+ L + K + D Sbjct: 1 MFDRLDDLLIRYEELMEELNNPYVVEDQKKFRKLMKEQADLAPIVEAYKNYKQAHQDVED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 + L EE D + + + L K +E + L D + +E+ AGAGG Sbjct: 61 SVALLEEESDEEMRELAKEELADAKKRIEELEQELKILLLPKDPNDEKNVMVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A+ L RMY R+AE++++KTE + +++ G K ++ G AY LK E GV Sbjct: 121 DEAALFASELYRMYVRYAERKRWKTEIVSLNENGIGGFKEVVFMVTGQGAYSKLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P ++ I +DCRID RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVMPEAEEFDIE-IDMNDCRIDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+V+ Q E+SQ +NK +A+ +LR+KLY+LEL++R+ E+ +++IG Sbjct: 240 SAVRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLELERRQSE--ESEARRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V + R + V+DG+LD+ + + +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTEHRIKLTLYKIDSVMDGELDELIDSLIAADQ 347 >gi|254674224|emb|CBA10008.1| peptide chain release factor 1 [Neisseria meningitidis alpha275] Length = 358 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 121/349 (34%), Positives = 174/349 (49%), Gaps = 8/349 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + RL + P ++ + L RE L + + Q D Sbjct: 4 SILEKLQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAELTPVVEVFQNYQLAQSDLA 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E+ + + E + + Q L D + ++E+ AG GG E Sbjct: 64 DAEEMLSDPEMKDFAAEEIEAAKAKIGALDTELQKLLLPKDTDDDKNIFIEIRAGTGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY+R+AE+ +++ E + ++ E G K I G AY LK E G HR Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ V P D+ +IE++ D RIDT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGDL + A +A + Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQ 349 >gi|88192320|pdb|2B9M|Y Chain Y, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2 From A Crystal Structure Of The Whole Ribosomal Complex. This File Contains The 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2 From A Crystal Structure Of The Whole Ribosomal Complex". The Entire Crystal Structure Contains One 70s Ribosome, Trnas, Mrna And Release Factor Rf2 And Is Described In Remark 400 Length = 365 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 153/353 (43%), Positives = 209/353 (59%), Gaps = 5/353 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+++L L G D RL L + EDP LW + A+ + +E L + + Sbjct: 5 RLAQRLEGLRGYLDIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRS 64 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L L L+E E+ + L+ +++ ++LL+ +A L + Sbjct: 65 LESDLQGLLELMEELPAEEREA----LKPELEEAAKKLDELYHQTLLNFPHAEKNAILTI 120 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 GAGGTE+ DWA MLLRMYTR+AE++ F+ E +++ G EAGI A +L+KG NAYG L Sbjct: 121 QPGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLL 180 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVR SP+D++ RRHTSF+ + V P VD+ +E+ + + RID RASG GGQ Sbjct: 181 SPEAGVHRLVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQ 240 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+ H+PTG+ V CQ RSQ KNK A +L+A+LYELE +KREE Sbjct: 241 GVNTTDSAVRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRG 300 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 I WG QIRSYVL VKD RT + + P +VLDGDL D + A L K Sbjct: 301 EVRPIEWGSQIRSYVLDK-NYVKDHRTGLMRHDPENVLDGDLMDLIWAGLEWK 352 >gi|197301354|ref|ZP_03166435.1| hypothetical protein RUMLAC_00081 [Ruminococcus lactaris ATCC 29176] gi|197299511|gb|EDY34030.1| hypothetical protein RUMLAC_00081 [Ruminococcus lactaris ATCC 29176] Length = 356 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 116/351 (33%), Positives = 192/351 (54%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D+ + R + + ++P + + + LM+E+ L + KE ++ + Sbjct: 1 MFDRLDDLLIRYEEVMGELQEPDVANDPERFRRLMKEQSDLAPIVEAYKEYKNCKQNIEE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 L+L EE D + + + L + +E + L D + +E+ AGAGG Sbjct: 61 SLQLLEEESDEEMRELAKEELSGSRARIEELEQELKILLLPKDPNDDKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY +A+ R++KTE + +++ G K ++ G AY +K E GV Sbjct: 121 DEAALFAAEIYRMYVHYADSRRWKTEMISLNENGIGGFKECVFMVTGQGAYSRMKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P + +++ I E D RID RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMP-EAEEVDVVIDEKDIRIDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+V+ Q E+SQ +NK +A+ +LR+KLY+LEL+K++ A+ +++IG Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLELEKQQ--ASEAAERRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L+GDLD+ + + +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSILNGDLDEIIDSLIAADQ 347 >gi|299472049|emb|CBN80132.1| conserved unknown protein [Ectocarpus siliculosus] Length = 466 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 149/352 (42%), Positives = 215/352 (61%), Gaps = 6/352 (1%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 L D RL+ L+ DP L+ + +A +++ER +++ + +K + L Sbjct: 106 LLSSRLDIPALEARLAELDALVSDPKLYDDSTKAGKIVKERAKVESKLENVKSLNSELQS 165 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYK--QFESLLSGEADSNDAYLEVHAGAG 126 + E+A E++ +L E + + ++ + E + L GE +++ YLE+ AGAG Sbjct: 166 WREMYEMASLEEEGDLLTECIEKVGALRKQAERARAETLLSLGGELSASNCYLELQAGAG 225 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTES DW +ML +MYTRWAE + F + L G+EAG++S + ++G +AYGWL+ E G Sbjct: 226 GTESHDWTSMLYKMYTRWAETKAFTLQPLNSSPGDEAGLRSVMVFVEGESAYGWLRSEAG 285 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPV----VDDSIEIEISESDCRIDTYRASGAGGQH 242 VHRLVR SPYD N RRHTSFS + V+P D+ ++EI D ++DT RA GAGGQH Sbjct: 286 VHRLVRNSPYDPNGRRHTSFSQVRVFPEAGGESGDAAKVEIPAKDLKVDTMRAQGAGGQH 345 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+V Q +RSQHKN+ A LRAK+++ + ++R N + Sbjct: 346 VNTTDSAVRLTHLPTGLVALSQSDRSQHKNRENAMRALRAKIFQRKEEERHAKRNEYAAG 405 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +G QIRSYVL PYQMVKD RT ++ S VLDG LD F+ A L + Sbjct: 406 LGDNAFGNQIRSYVLSPYQMVKDHRTGKQEGDVSGVLDGGLDGFIDAALIAE 457 >gi|225075789|ref|ZP_03718988.1| hypothetical protein NEIFLAOT_00805 [Neisseria flavescens NRL30031/H210] gi|224952871|gb|EEG34080.1| hypothetical protein NEIFLAOT_00805 [Neisseria flavescens NRL30031/H210] Length = 358 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 121/349 (34%), Positives = 176/349 (50%), Gaps = 8/349 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + RL + P ++ + L RE L + + Q D Sbjct: 4 SILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQSDLA 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E+ + + E + + Q L D + ++EV AG GG E Sbjct: 64 DAEEMLSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEVRAGTGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY+R+AE+ +++ E + ++ E G K I G AY LK E G HR Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ V P D+ +IE++ +D RIDT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ V+DGDL++ A +A + Sbjct: 302 DRSERIRTYNY-PQGRITDHRINLTLHKLDFVMDGDLEEITNALIAEHQ 349 >gi|327403921|ref|YP_004344759.1| peptide chain release factor 2 (bRF-2) [Fluviicola taffensis DSM 16823] gi|327319429|gb|AEA43921.1| bacterial peptide chain release factor 2 (bRF-2) [Fluviicola taffensis DSM 16823] Length = 360 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 140/352 (39%), Positives = 223/352 (63%), Gaps = 3/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +++++++ + +L KT+DP+ W + +A+ M++ + L I Sbjct: 9 EINQRIDAIASYLKIPEKEMQLRESELKTQDPNFWDDPKKAEAEMKDIRGLKFWIESYTR 68 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ + D +L+E + + E + Q + +E + +++LSGE D+ A +++ Sbjct: 69 LKSQSDDLEVLIEFVK--EGAAEESECDEAYQSMLTTIEEVELKNMLSGEEDALSAVIQI 126 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGGTE+ DWA ML+RMY WAEK +K + L +G+ AGIK+ TL I+G A+G+L Sbjct: 127 TAGAGGTEACDWAGMLMRMYIMWAEKSGYKVKELNFQEGDVAGIKTVTLEIEGEFAFGYL 186 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE G+HRLVR+SPY+S +R TSF+S++VYP VDD+IEI ++ +D +T+R+ GAGGQ Sbjct: 187 KGENGIHRLVRVSPYNSQGKRMTSFASVYVYPSVDDTIEIYVNPADITFETFRSGGAGGQ 246 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN ++AVR+ H +G++++ + RSQ NK +A +LR++LYE+EL+KR E + E+ Sbjct: 247 NVNKVETAVRLRHAASGIIIENSESRSQLANKEKAMQLLRSQLYEIELRKRAESRDQIEA 306 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K +I WG QIRSYVL + VKD RT+ P VLDGDL F+K+ L + Sbjct: 307 GKKKIEWGSQIRSYVLDD-RRVKDHRTDYSVNDPDKVLDGDLLPFLKSFLMM 357 >gi|85057585|ref|YP_456501.1| peptide chain release factor 2 [Aster yellows witches'-broom phytoplasma AYWB] gi|84789690|gb|ABC65422.1| bacterial peptide chain release factor 2 [Aster yellows witches'-broom phytoplasma AYWB] Length = 370 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 160/350 (45%), Positives = 219/350 (62%), Gaps = 3/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + L L + Q + LN + WQN +A + ++ L + + ++ + Sbjct: 13 LYQNLQDLKQALNLKKTNQTIEKLNCAMQKEDFWQNPKKAVTISQQFNDLQDKKNTLEIL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L ++ S L + L+ + V + + L+ D N+A L H Sbjct: 73 EQNYLDLETFFNLNESPNEASAL--LEEELKNLTKSVFDFKIKIFLNQPYDINNAILLFH 130 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDW ML RMY ++A+K+ FKTE L+ GE AG+KSATLLIKG AYG+LK Sbjct: 131 PGAGGTESQDWCEMLFRMYQKYAQKKNFKTEILDYQLGEGAGVKSATLLIKGTYAYGYLK 190 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DSNS+RHTSF + V P +++ I+I + D +ID +R+SGAGGQH Sbjct: 191 AEKGVHRLVRISPFDSNSKRHTSFVACDVLPEINEEIKINLKTEDLKIDVFRSSGAGGQH 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGES 301 VNTTDSAVRITH+PTG+VV CQ ERSQ KNK +A ML+ KL++L Q++E+ A +S Sbjct: 251 VNTTDSAVRITHLPTGLVVGCQNERSQIKNKEKALQMLKTKLFQLASKQQKEQNAKKFQS 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + E GWG QIRSYV PY+MVKD RTN E V+DG++D+F+ L Sbjct: 311 DQKENGWGSQIRSYVFHPYKMVKDHRTNQEIFQLEQVMDGNIDEFINGYL 360 >gi|161870534|ref|YP_001599706.1| peptide chain release factor 1 [Neisseria meningitidis 053442] gi|189039981|sp|A9M1Q8|RF1_NEIM0 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|161596087|gb|ABX73747.1| peptide chain release factor I [Neisseria meningitidis 053442] Length = 358 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 121/349 (34%), Positives = 174/349 (49%), Gaps = 8/349 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + RL + P ++ + L RE L + + + D Sbjct: 4 SILEKLQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAELTPVVEVFQNYRLAQSDLA 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E+ + + E + + Q L D + ++EV AG GG E Sbjct: 64 DAEEMLSDPEMKDFAAEEIEAAKAKIGALDTELQKLLLPKDADDDKNIFIEVRAGTGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY+R+AE+ +++ E + ++ E G K I G AY LK E G HR Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ V P D+ +IE++ D RIDT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGDL + A +A + Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQ 349 >gi|153007050|ref|YP_001381375.1| peptide chain release factor 1 [Anaeromyxobacter sp. Fw109-5] gi|166223527|sp|A7HI45|RF1_ANADF RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|152030623|gb|ABS28391.1| peptide chain release factor 1 [Anaeromyxobacter sp. Fw109-5] Length = 372 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 119/341 (34%), Positives = 184/341 (53%), Gaps = 10/341 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + QR L DP + N + + +ER L+ + ++ + + D L Sbjct: 10 LEAIEQRFEELTALLSDPSVASNGDRFRKVSKERASLEPTVEALRAYRKLVTDIGDNEAL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + Q ++ + AD D LE+ AGAGG E+ Sbjct: 70 LEEKDPDLREMAKEELAQLRPQVDPAEEQLKLYLVPKDPADEKDVILEIRAGAGGDEAGL 129 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A LLRMY R+AE+R ++TE + G G+K T+ I G + Y WLK E GVHR+ R Sbjct: 130 FAAELLRMYLRYAERRGWRTEVADTSAGNLGGVKDVTVNIAGDSVYSWLKFESGVHRVQR 189 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P + I+I++S +D +D +R++G+GGQ VNTTDSAVR+ Sbjct: 190 VPATEAQGRIHTSTVTVAVMP-EAEDIDIQVSPADIEMDVFRSTGSGGQSVNTTDSAVRL 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH PTG++V+CQQE+SQ KN+ A MLRAKLYE+EL+++ + K+++G G Sbjct: 249 THKPTGIIVKCQQEKSQLKNRNMAMRMLRAKLYEIELERQRSARDAA--RKSQVGTGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P + D R N + + V+DGD+ D + A Sbjct: 307 EKIRTYNF-PQDRLTDHRINYTRHNLPAVMDGDVQDVIDAC 346 >gi|257464821|ref|ZP_05629192.1| peptide chain release factor 1 [Actinobacillus minor 202] gi|257450481|gb|EEV24524.1| peptide chain release factor 1 [Actinobacillus minor 202] Length = 360 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 116/344 (33%), Positives = 185/344 (53%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R L D + + + + +E L+ +S + D L Sbjct: 9 LESLSERHEELQALLGDATIINDQDKFRAYSKEYAQLEEVVSTFNRWKKLHSDIEEAQIL 68 Query: 76 ALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + +E N I+ + Q L D + +LE+ AG GG E+ +A Sbjct: 69 LDDPDMKDMAAEEIEANKAEIEQLEQNLQILLLPKDPNDEYNCFLEIRAGTGGDEAGIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE ++++ E L ++ E+ G K + I G YG LK E G HR+ R+ Sbjct: 129 GDLYRMYSRYAEGKRWRIEELSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A +L +++ ++E +K+ + ++ + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKALAVLASRIVQVEKEKQAQEQ--ADTRRNLLGSGDRSDK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +V++G +D+ ++ + + Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 349 >gi|192360464|ref|YP_001981172.1| peptide chain release factor 1 [Cellvibrio japonicus Ueda107] gi|238692456|sp|B3PJP4|RF1_CELJU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|190686629|gb|ACE84307.1| peptide chain release factor 1 [Cellvibrio japonicus Ueda107] Length = 360 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 120/342 (35%), Positives = 176/342 (51%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R ++ + + N + L +E L+ + K L D L Sbjct: 9 LERLKERYEEVSALLSEADVINNQARFRDLSKEYAELEPVVVAYKGYLQLLADIEEAKHL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + L+ + +E + E D + YLEV AG GG E+ Sbjct: 69 IAEGDA-DMREMAEEELEGCEARLEPTELELQKLLLPKDPNDEKNCYLEVRAGTGGDEAA 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 ++ L RMY+R+AE + ++ E L +GE G K L+ G Y LK E G HR+ Sbjct: 128 IFSGDLFRMYSRYAETQGWRVEILSQSEGEHGGFKEIISLVSGSGVYSKLKFESGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS ++ V P D+ E+ I+++D RIDTYRASGAGGQHVN TDSA+R Sbjct: 188 RVPETESQGRIHTSACTVAVMPEADELEEVNINKADLRIDTYRASGAGGQHVNKTDSAIR 247 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIPTG+VV+CQ ERSQHKN+A+A ++L KL +Q+ +I E + +G G Sbjct: 248 ITHIPTGIVVECQDERSQHKNRARAMSLLATKLKT--MQEEAAHKSISEERRNLVGSGDR 305 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R N+ S V+ GDL+ + Sbjct: 306 SERIRTYNY-PQGRVTDHRINLTLYSLDAVMQGDLEPVIGPL 346 >gi|325204648|gb|ADZ00102.1| peptide chain release factor 1 [Neisseria meningitidis M01-240355] Length = 358 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 121/349 (34%), Positives = 174/349 (49%), Gaps = 8/349 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + RL + P ++ + L RE L + + Q D Sbjct: 4 SILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQSDLA 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E+ + + E + + Q L D + ++E+ AG GG E Sbjct: 64 DAEEMLSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEIRAGTGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY+R+AE+ +++ E + ++ E G K I G AY LK E G HR Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ V P D+ +IE++ D RIDT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGDL + A +A + Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITNALIAEHQ 349 >gi|331085530|ref|ZP_08334614.1| peptide chain release factor 1 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330407417|gb|EGG86919.1| peptide chain release factor 1 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 358 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 115/351 (32%), Positives = 187/351 (53%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ + R + + ++P + + + LM+E+ L + E + Sbjct: 1 MFDKLEDLLIRYEEIMGELQEPDVANDQERFRKLMKEQADLAPIVEAYTEYKKAKQSIAD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127 E+ E D + + + L K VE + E D + +E+ AGAGG Sbjct: 61 SEEMLEIESDEEMRELAKEELSSSKKRVEELEHELKILLLPKDPNDDKNIMVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 ES +A + RMY +AE +++KTE + +++ G K ++ G Y +K E GV Sbjct: 121 DESALFAAEVYRMYVHYAESKRWKTEMISVNENGIGGFKEVVFMVSGQGVYSRMKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P + +++ I E D RID RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMP-EAEEVDVVIEEKDIRIDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+V+ Q E+SQ +NK +A+ +LR+KLYELEL+K++ + E+ +++IG Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQ--SAEAEARRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L+GDLD+ + + +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSILNGDLDEVIDSLIAADQ 347 >gi|196231602|ref|ZP_03130460.1| peptide chain release factor 2 [Chthoniobacter flavus Ellin428] gi|196224455|gb|EDY18967.1| peptide chain release factor 2 [Chthoniobacter flavus Ellin428] Length = 350 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 149/323 (46%), Positives = 210/323 (65%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W N A+ + E L N I + + ++ D +L+ELA E +D + ++E Sbjct: 1 MAEPDFWANKERAQKNVEEVSTLRNKIGPLLTLDRQIEDLPVLIELAREANDETSVKEVE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 I+ + + + LL+G D +A+L +++GAGGTES DWA+MLLRMY RW E+ Sbjct: 61 KEYGVIQNGLAEFELKMLLNGPNDRYNAFLTINSGAGGTESCDWADMLLRMYQRWIERHG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK+E ++I GEEAGIKS TL + G A+G+L E+GVHRLVRISP+D+N RRHTSF+ + Sbjct: 121 FKSEVMDIQLGEEAGIKSCTLKVAGEYAFGYLATERGVHRLVRISPFDANKRRHTSFAGV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + +S IEI+E+D +DTYR+ G GGQ+VN ++AVRI HIPTG+V CQ ERSQ Sbjct: 181 DVVPELPESAPIEINEADIEVDTYRSGGKGGQNVNKVETAVRIRHIPTGIVAACQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 KNK A ML+AKL ++E+ K K ++ +G QIRSYV QPYQ V DLRT Sbjct: 241 QKNKVTAMRMLQAKLQQIEVDKMAAETAAAYGEKADVSFGSQIRSYVFQPYQKVLDLRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 ++ ++ S V+DGD+D F++ L Sbjct: 301 VDTSNISAVMDGDIDAFIQGKLR 323 >gi|302190497|ref|ZP_07266751.1| peptide chain release factor 2 [Lactobacillus iners AB-1] Length = 332 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 145/324 (44%), Positives = 205/324 (63%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 D W + A+ ++ ++ + + + L D +EL E + +L E + Sbjct: 1 MADDTFWNDQTNAQKIIEATNYMREKVDKYQTLSSALADAKTAVELYNMEPENDMLMEIT 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++++K E + LLSG+ D ++A LE+H+GAGGTE+ DWANML RMY RW + Sbjct: 61 AEVEKLKNEFNNYELHLLLSGKYDDHNALLEIHSGAGGTEAMDWANMLFRMYQRWCDSHN 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 E + G+EAG+KS ++ ++G NA+G LK E GVHRLVRISP+DS RRHTSF+S+ Sbjct: 121 LTFEVDDFQVGDEAGLKSVSVRVQGNNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D SI IEI+ D RID YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ Sbjct: 181 EVIPEIDKSINIEINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A +MLRAKL++LE K+ + + ++ EI +G QIRSYV PY MVKD RT+ Sbjct: 241 FQNRETAMDMLRAKLFKLEEDKKRKQTEALKGNQKEINFGSQIRSYVFHPYNMVKDHRTD 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + V++G+LD F+ A L Sbjct: 301 YETSDTIGVMNGNLDPFIYAYLQW 324 >gi|187476811|ref|YP_784835.1| peptide chain release factor 1 [Bordetella avium 197N] gi|115421397|emb|CAJ47902.1| peptide chain release factor 1 [Bordetella avium 197N] Length = 356 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 119/344 (34%), Positives = 179/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + RL ++ DP ++ + L RER L+ + Q D E+ Sbjct: 5 LEQLAHRLIEVDALLADPDSAGDMDRFRRLSRERAELEPVVLAFNAFQSTQADLATAQEM 64 Query: 76 ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + ++ +E + Q L D +LE+ AG GG ES ++ Sbjct: 65 LADPEMKAMAEEEIKAARERIEVLEGELQVLLLPRDPNDGRSLFLEIRAGTGGDESALFS 124 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY+R+AE + ++ E + E G K I G AYG LK E G HR+ R+ Sbjct: 125 GDLLRMYSRYAESQGWRVEIMSESPSELGGYKEVIARIDGDGAYGRLKFESGAHRVQRVP 184 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ +I I+ +D RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 185 ATEAQGRIHTSACTVAVMPEADEMNDIVINPADLRIDTFRASGAGGQHINKTDSAVRITH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQH+NK +A +L A+L + EL++R+ + K+ +G G + Sbjct: 245 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKDKELRERQ--SKEAAERKSLVGSGDRSER 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +L+GDL++ A LA + Sbjct: 303 IRTYNY-PQGRVTDHRINLTLYKLQQILEGDLNELTGALLAEHQ 345 >gi|145632952|ref|ZP_01788685.1| peptide chain release factor 1 [Haemophilus influenzae 3655] gi|144986608|gb|EDJ93174.1| peptide chain release factor 1 [Haemophilus influenzae 3655] Length = 361 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 111/344 (32%), Positives = 182/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R L D + + + + +E L++ + + L Sbjct: 10 LESLKERYEELEALLGDASVISDQDKFRAYSKEYSQLEDVVKCFNRWTQLNQNIEEAEIL 69 Query: 76 ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q + + I+ + Q L D + YLE+ AG GG E+ +A Sbjct: 70 LDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 129 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE ++++ E L ++ E+ G K + + G YG LK E G HR+ R+ Sbjct: 130 GDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGEGVYGQLKFESGGHRVQRVP 189 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 190 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 249 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++ + + +G G + Sbjct: 250 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQ--TDMRRNLLGSGDRSDK 307 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +V++G +D+ ++ + + Sbjct: 308 IRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQPIITEYQ 350 >gi|83858490|ref|ZP_00952012.1| peptide chain release factor 2 [Oceanicaulis alexandrii HTCC2633] gi|83853313|gb|EAP91165.1| peptide chain release factor 2 [Oceanicaulis alexandrii HTCC2633] Length = 316 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 200/309 (64%), Positives = 241/309 (77%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRER LD +++ ++EI L D L L E+A E D + Q+ ++ L+ ++ + + Sbjct: 1 MRERNRLDQSMTEVQEIVADLADTLELAEMAEMEGDDDLYQDATEALKALRARAGKAELQ 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD ND+YLE+H GAGGTE+QDWA+ML RMYTRWAEK FK E +E GEEAG+ Sbjct: 61 ALLSGEADGNDSYLEIHPGAGGTEAQDWASMLARMYTRWAEKSGFKVEVIEAQAGEEAGL 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KS T+L+KG NAYGWLK E GVHRLVRISPYDS+ RRHTSF+S+W YP+VDD+IEIEI + Sbjct: 121 KSITILVKGENAYGWLKTEAGVHRLVRISPYDSSGRRHTSFASVWTYPLVDDTIEIEIED 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D R+DTYRASGAGGQH+N TDSAVR+TH PTG+VV CQ +RSQHKN+A AW MLRA+LY Sbjct: 181 KDVRVDTYRASGAGGQHINKTDSAVRLTHEPTGIVVACQTDRSQHKNRANAWTMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ELELQKREE A SKT+IGWG QIRSYVLQPYQMVKDLRT +E + VLDGDLDD Sbjct: 241 ELELQKREEAAQADAESKTDIGWGHQIRSYVLQPYQMVKDLRTQVETSDTQGVLDGDLDD 300 Query: 346 FMKATLAIK 354 FM A LA + Sbjct: 301 FMAAALAQR 309 >gi|225575054|ref|ZP_03783664.1| hypothetical protein RUMHYD_03143 [Blautia hydrogenotrophica DSM 10507] gi|225037724|gb|EEG47970.1| hypothetical protein RUMHYD_03143 [Blautia hydrogenotrophica DSM 10507] Length = 357 Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats. Identities = 121/351 (34%), Positives = 193/351 (54%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ + R + ++ +P + N + LMRE+ L + KE ++ Sbjct: 1 MFDKLEDLLIRFEEVLSELGEPGVADNQERFQKLMREQSELQPIVDTYKEYKENQQTIQD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 + + EE D + + + L K V + L DS + +E+ AGAGG Sbjct: 61 SVSMLEEESDEEMREMLKEELSDAKRRVGELENELKILLLPKDPNDSKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY ++AE R++KTE L +++ G K T +I+G AY LK E GV Sbjct: 121 DEAALFAAEIYRMYVKYAESRRWKTEMLSLNENGIGGFKEVTFMIQGQGAYSRLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ + P + I+ + +DC+ D +RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTITVAIMP-EAEEIDFHLDLNDCKFDVFRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V+ CQ E+SQ KNK +A +LR++LYE+ELQK+ + E+ ++++G Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYEMELQKQHD--AEAEARRSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + L+GDLD+ + + +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHRLEGTLNGDLDEVIDSLIAADQ 347 >gi|294787740|ref|ZP_06752984.1| peptide chain release factor 1 [Simonsiella muelleri ATCC 29453] gi|294484033|gb|EFG31716.1| peptide chain release factor 1 [Simonsiella muelleri ATCC 29453] Length = 358 Score = 240 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 121/349 (34%), Positives = 181/349 (51%), Gaps = 8/349 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 L D N RL + P N+ + L +E L + ++ + D Sbjct: 4 SLLDKLQNLAHRLEEVTALLGSPEATANMDNYRKLNQEHAELTPIVETYQQYRQAESDLA 63 Query: 71 ILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E+ + + +E +I+ Q L D + ++E+ AG GG E Sbjct: 64 DAQEMLSDPEMKDFAAEEIEHAKTQIEQLDFELQKLLLPKDADDDKNIFIEIRAGTGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY+R+AE+ +++TE + + + G K + + G AY LK E G HR Sbjct: 124 AALFAGDLLRMYSRFAERNRWQTEIVSASESDLGGYKEVIVRLIGLGAYSKLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ V P D+ EI+++ +D RIDT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPTTESQGRIHTSACTVAVMPEADELEEIQLNPNDLRIDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 +RITH+PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G Sbjct: 244 IRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDK--QKREAQAKEAAERKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGD+++ A +A + Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDMEEITSALIAEHQ 349 >gi|292669720|ref|ZP_06603146.1| peptide chain release factor RF1 [Selenomonas noxia ATCC 43541] gi|292648517|gb|EFF66489.1| peptide chain release factor RF1 [Selenomonas noxia ATCC 43541] Length = 354 Score = 240 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 110/346 (31%), Positives = 171/346 (49%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L DP + ++ + + RE L + Q L L Sbjct: 5 LNAVADKYRELEALLSDPAVMADMEKWQRYTREHAALTPIVEAYSAYQQALLTIEEDQGL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYLEVHAGAGGTESQD 132 E D + + + + Q L D + +E+ G GG E+ Sbjct: 65 LAEADAEMKAMLEEEIAEAEERRDQLAQELPILLLPRDPNDDKNVIVEIRGGVGGEEAAL 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY R+AE++ ++TE L + E G K + L+ G AY LK E G HR+ R Sbjct: 125 FAASLFRMYARYAERQGWRTEILSSNPTEIGGFKEISFLVNGAGAYSRLKYESGTHRVQR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 I +S R HTS ++ V P + +E+ I +D RIDTY ASGAGGQ+VN T++A+RI Sbjct: 185 IPVTESGGRIHTSAVTVAVLP-EAEDVEVTIDPNDLRIDTYCASGAGGQYVNRTETAIRI 243 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIP+G+VVQCQ E+SQ KN+ +A +LRA+LY+ ++E+ + ++++G G Sbjct: 244 THIPSGIVVQCQDEKSQLKNREKAMKVLRARLYD--RARQEQADAVAADRRSQVGSGDRS 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + VLDG+LD+ + + + Sbjct: 302 ERIRTYNF-PQGRVTDHRIGLTLYKIDAVLDGELDEILAGLITADQ 346 >gi|260914191|ref|ZP_05920664.1| peptide chain release factor RF1 [Pasteurella dagmatis ATCC 43325] gi|260631824|gb|EEX50002.1| peptide chain release factor RF1 [Pasteurella dagmatis ATCC 43325] Length = 360 Score = 240 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 116/344 (33%), Positives = 186/344 (54%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ +R L D + + + + +E L++ + + L Sbjct: 9 LDSLKERHEELEALLGDASVISDQEKFRAYSKEYAQLEDVVKCFARWNQLNSNIEEAQLL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + QE + + +VE + Q L D + YLE+ AG GG E+ +A Sbjct: 69 LDDLSMKEMAQEEIEECKAELEQVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE ++++ E L ++ E+ G K + + G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEGKRWRIEVLSANESEQGGYKEIIVKVSGEGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ SD RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 189 KTESQGRIHTSACTVAVMPELPESELPEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++E+ ++ + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKALSVLASRIVQAEKERQEQ--QQADTRRNLLGSGDRSDK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +V++G +D+ ++ + + Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 349 >gi|221135300|ref|ZP_03561603.1| peptide chain release factor 1 [Glaciecola sp. HTCC2999] Length = 361 Score = 240 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 118/339 (34%), Positives = 185/339 (54%), Gaps = 9/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R + DP + + + L +E L++ + ++ Q D E+ Sbjct: 9 LETLVERFEEVQALLGDPDVIGDQNRFRSLSKEYAQLEDVVKSFRDYQGAQEDLASANEM 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + I+ + Q L D ++ +LE+ AGAGG E+ Sbjct: 69 MQEDDAEMREMAQEEIKAAKASIETLEQALQILLLPRDPQDDSNCFLEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE + ++ + + ++GE G K I G AYG +K E G HR+ R Sbjct: 129 FAGDLYRMYSRYAETKGWRVDLVSANEGEHGGYKEVIANIIGDGAYGVMKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V V +S I+I+ +D R+DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRIHTSACTVAVLAEVAESEAIDINPADLRVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIP+GVVV+CQ ERSQHKN+A+A ++L+++L +E +KR+ + K+ +G G Sbjct: 249 THIPSGVVVECQDERSQHKNRAKAMSVLQSRLNNIEKEKRDAE--EASTRKSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +IR+Y P V D R N+ DV+ GD+D ++ Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLDDVVAGDVDALLE 344 >gi|184200580|ref|YP_001854787.1| peptide chain release factor 2 [Kocuria rhizophila DC2201] gi|183580810|dbj|BAG29281.1| peptide chain release factor 2 [Kocuria rhizophila DC2201] Length = 372 Score = 240 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 138/352 (39%), Positives = 220/352 (62%), Gaps = 1/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + D + ++ ++ L + P LW N EA+ + + H + + +++I Sbjct: 13 LRATYDSVAAVSDAEMLLKEITELEQQAAAPDLWDNPDEAQKVTSQLSHKQSKVDRLRKI 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +++ELA +EDD ++ L I+ + + ++LL+GE D +A + + Sbjct: 73 ESRIDDLEVMVELAEDEDDQETRDASATELTSIQKALSELEIQTLLAGEYDEREAVVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ D+A +L+RMY RWAE+ + T+ L+ EEAG+KSAT +K P A+G L Sbjct: 133 SGAGGVDAADFAEILMRMYLRWAERHGYPTKVLDTSYAEEAGLKSATFEVKAPYAFGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+++ V P+++ +EI E++ ++D +R+SG GGQ Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESDDTVEIPETELKVDVFRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L L ++ + Sbjct: 253 VNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLLRQEEADAKKKEMAGD 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRTN E+ +PS V DG +D F+ + + Sbjct: 313 -VKASWGDQMRSYVLNPYQMVKDLRTNYEEGNPSSVFDGGIDSFIDEGIRWR 363 >gi|119361546|sp|Q4QKS1|RF1_HAEI8 RecName: Full=Peptide chain release factor 1; Short=RF-1 Length = 360 Score = 240 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 111/344 (32%), Positives = 180/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R L D + + + + +E L+ + + L Sbjct: 9 LESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQNIEEAEIL 68 Query: 76 ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q + + I+ + Q L D + YLE+ AG GG E+ +A Sbjct: 69 LDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE +++ E L ++ E+ G K + + G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESKRWCVEMLSANESEQGGYKEVIVKVSGEGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++ + + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQ--TDMRRNLLGSGDRSDK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +V++G +D+ ++ + + Sbjct: 307 IRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQPIITEYQ 349 >gi|302338432|ref|YP_003803638.1| peptide chain release factor 2 [Spirochaeta smaragdinae DSM 11293] gi|301635617|gb|ADK81044.1| peptide chain release factor 2 [Spirochaeta smaragdinae DSM 11293] Length = 339 Score = 240 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 160/335 (47%), Positives = 214/335 (63%), Gaps = 1/335 (0%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q + L ++ P W++ A+ + E + L + K++ D L ELA EE Sbjct: 3 QEIKVLEAESGSPEFWEDRERAEKRLGELKRLHKRLDPWKDLLSSFEDLETLFELAAEEQ 62 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D S + L + + GE D ++A+L +H+GAGGTE+ DW MLLRM Sbjct: 63 DESQEHDIKRQLDEVGDTYRGLNLTEMFQGEFDGSNAFLTIHSGAGGTEACDWTAMLLRM 122 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 YTRWAE+R+F + L++ + E G+KS TL I G +G+LK E GVHRLVRISP+DS+ Sbjct: 123 YTRWAERREFSVQTLDLLEAE-GGVKSVTLQINGDFVFGYLKSEIGVHRLVRISPFDSSG 181 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 RRHTSF+S+++ PV+DD IE++I + RIDTYRA GAGGQHVN TDSAVRITHI TG+V Sbjct: 182 RRHTSFASVYISPVIDDDIEVDIKPEELRIDTYRAQGAGGQHVNKTDSAVRITHISTGIV 241 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 VQCQ ERSQ+KNKA A +LR++LYE +++E+ K EI WG QIRSYV QPY Sbjct: 242 VQCQNERSQYKNKAMALKILRSRLYEHYKKEQEKEQEKHAQEKKEISWGNQIRSYVFQPY 301 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 MVKD RT E + V+DG++DDF+ A L + Sbjct: 302 TMVKDHRTKHEVGNIQAVMDGEIDDFIIAFLNWMQ 336 >gi|119361511|sp|Q2KZZ3|RF1_BORA1 RecName: Full=Peptide chain release factor 1; Short=RF-1 Length = 360 Score = 240 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 119/344 (34%), Positives = 179/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + RL ++ DP ++ + L RER L+ + Q D E+ Sbjct: 9 LEQLAHRLIEVDALLADPDSAGDMDRFRRLSRERAELEPVVLAFNAFQSTQADLATAQEM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + ++ +E + Q L D +LE+ AG GG ES ++ Sbjct: 69 LADPEMKAMAEEEIKAARERIEVLEGELQVLLLPRDPNDGRSLFLEIRAGTGGDESALFS 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY+R+AE + ++ E + E G K I G AYG LK E G HR+ R+ Sbjct: 129 GDLLRMYSRYAESQGWRVEIMSESPSELGGYKEVIARIDGDGAYGRLKFESGAHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ +I I+ +D RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 189 ATEAQGRIHTSACTVAVMPEADEMNDIVINPADLRIDTFRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQH+NK +A +L A+L + EL++R+ + K+ +G G + Sbjct: 249 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKDKELRERQ--SKEAAERKSLVGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +L+GDL++ A LA + Sbjct: 307 IRTYNY-PQGRVTDHRINLTLYKLQQILEGDLNELTGALLAEHQ 349 >gi|56460033|ref|YP_155314.1| protein chain release factor A [Idiomarina loihiensis L2TR] gi|61214579|sp|Q5QUZ8|RF1_IDILO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|56179043|gb|AAV81765.1| Protein chain release factor A [Idiomarina loihiensis L2TR] Length = 364 Score = 240 bits (611), Expect = 3e-61, Method: Composition-based stats. Identities = 121/346 (34%), Positives = 185/346 (53%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R + +P + + + L RE L+ + +E + D ++ Sbjct: 10 LEGLVERYQEVQALLGEPDVISDQNRFRSLSREYSQLEEVVGCFEEYRQNQDDQAAAKDM 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL---LSGEADSNDAYLEVHAGAGGTESQD 132 A ++D + + K E E + L D YLE+ AGAGG E+ Sbjct: 70 AEDDDAEMREMAEEELKEARKAEEELENRLQLLLLPKDPNDDRSCYLEIRAGAGGDEASI 129 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AEK +K + DGE G K + G YG +K E G HR+ R Sbjct: 130 FAGDLFRMYSRYAEKNGWKVNIVSASDGEHGGYKEIIAHMSGDGVYGRMKFESGGHRVQR 189 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P + ++ +EI+ +D R+DTYRASGAGGQHVN TDSA+R+ Sbjct: 190 VPETESQGRIHTSACTVAVLPEIPEAEAVEINPADLRVDTYRASGAGGQHVNRTDSAIRL 249 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTGVVV+CQ+ERSQHKN+A+A ++L+A++ LE +KR+ + + + +G G Sbjct: 250 THIPTGVVVECQEERSQHKNRAKAMSVLQARIQRLEDEKRQAEED--STRRNLVGSGDRS 307 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +VL GD+D + A + + Sbjct: 308 ERIRTYNY-PQSRVTDHRINLTLYRLDEVLTGDIDLILDAIITEHQ 352 >gi|83814103|ref|YP_445897.1| peptide chain release factor 2 [Salinibacter ruber DSM 13855] gi|83755497|gb|ABC43610.1| peptide chain release factor 2 [Salinibacter ruber DSM 13855] Length = 378 Score = 240 bits (611), Expect = 4e-61, Method: Composition-based stats. Identities = 153/357 (42%), Positives = 223/357 (62%), Gaps = 8/357 (2%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ ++ LGG D D + LN + DP W + A+ + + + I ++ Sbjct: 11 QLAERVEALGGYLDVDGRRMTVEELNQERMDPDFWDDPDRAREIEKRIAREEEWIEAWED 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++++ D L L+ E + + E ++++ +++ + ESLL D DA +E+ Sbjct: 71 VKEQAEDIETLQLLSEE-EGEDMSDEIDAEARKLEQKLDRLELESLLDDPDDERDAIVEI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 + GAGGTESQDWA MLLRMY RWAE + + E + GEEAGIKSATL ++G +AYG L Sbjct: 130 NPGAGGTESQDWAEMLLRMYMRWAEDQDYDVELVHQQPGEEAGIKSATLNVQGRHAYGRL 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP+D++SRRHTSF+S++VYP VDDSI +++SE + + T+R+ G GGQ Sbjct: 190 KSETGVHRLVRISPFDADSRRHTSFASVFVYPEVDDSIGVDLSEGEIELQTFRSGGKGGQ 249 Query: 242 HVNTTDSAVRITH-------IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 HVN ++ VR+ T V C QERSQH+N+ +A ML++++Y+ E + +EE Sbjct: 250 HVNKVETGVRLIWTGTLSNGEETTVRAACTQERSQHQNRRRAREMLKSRIYQAERELKEE 309 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ESSK I WG QIRSYVL PY+MV D RT+ ++ VL+G+LD F+KA L Sbjct: 310 EKERLESSKKSIEWGSQIRSYVLHPYKMVNDHRTDTKRNDAEAVLEGELDPFIKAYL 366 >gi|237745909|ref|ZP_04576389.1| peptide chain release factor 1 [Oxalobacter formigenes HOxBLS] gi|229377260|gb|EEO27351.1| peptide chain release factor 1 [Oxalobacter formigenes HOxBLS] Length = 360 Score = 240 bits (611), Expect = 4e-61, Method: Composition-based stats. Identities = 119/344 (34%), Positives = 186/344 (54%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ RL+ ++ P + + + L RE L ++ ++ D E+ Sbjct: 9 LEHLSDRLAEIDELLMQPEVVSDQENYRKLNREHAELAPVVALYRDFSQVRQDIDTAREM 68 Query: 76 ALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + Q+ D ++ E Q L D + YLE+ AG GG ES +A Sbjct: 69 LADPEMKEFAQQEIDGAEKKIAGIEEELQLMLLPKDPDDGKNIYLEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AEK ++K E + E G + + + G + Y LK E G HR+ R+ Sbjct: 129 GDLLRMYTRFAEKNRWKAEIVSASMSELGGYREVIVRLVGKDVYSRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P DD ++ I+ +D R+DT+RASGAGGQH+N TDSAVRITH Sbjct: 189 VTETQGRIHTSACTVAVMPEADDVSDVHINPADIRVDTFRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQHKNKAQA +L A++ + ++Q+++ A + K+ IG G + Sbjct: 249 LPTGIVVECQDDRSQHKNKAQAMQVLAARIKDRQMQEQQ--AKEAATRKSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ ++DGD+D+ + A +A + Sbjct: 307 IRTYNY-PQGRVTDHRINLTLYKLEFIMDGDMDELVSALVAEHR 349 >gi|307689287|ref|ZP_07631733.1| peptide chain release factor 2 [Clostridium cellulovorans 743B] Length = 329 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 154/322 (47%), Positives = 217/322 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++ W N+ A+ + + + + I Q + D +L+E+A+EE+D S++ E Sbjct: 1 MQESGFWDNLERAQSVTARAKGIKDRIDLYNNFQSSVEDIKVLIEMAIEENDSSLVTEVY 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + + VE + E +LSGE D+N+A + +H+G GGT++ DW MLLRMYTRW EK+ Sbjct: 61 NEISTLSDSVENLRLELMLSGEYDTNNAIVTLHSGVGGTDAMDWTEMLLRMYTRWCEKKA 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L++ G+EAGIKSATL + G AYG+LK E+G+HRLVRISP+++N +R TSF+S+ Sbjct: 121 FNVETLDLQVGDEAGIKSATLKVTGLYAYGYLKAEKGIHRLVRISPFNANGKRQTSFASL 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + +EI+ SD ++DTYRASGAGGQHVN T+SA+RITHIPTG+VVQCQ ERSQ Sbjct: 181 EVTPELRQDQNVEINPSDLKVDTYRASGAGGQHVNKTESAIRITHIPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A NML++KL EL+ + +E ++GWG QIRSYV PY MVKD RTN Sbjct: 241 IQNRETALNMLKSKLVELKERAHKEKIEDLTGDLKDMGWGSQIRSYVFHPYTMVKDHRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 I+ V+DG+LD F+K L Sbjct: 301 IQVNDVYKVMDGELDVFIKGYL 322 >gi|255348832|ref|ZP_05380839.1| peptide chain release factor 2 [Chlamydia trachomatis 70] gi|255503372|ref|ZP_05381762.1| peptide chain release factor 2 [Chlamydia trachomatis 70s] gi|255507050|ref|ZP_05382689.1| peptide chain release factor 2 [Chlamydia trachomatis D(s)2923] gi|296435060|gb|ADH17238.1| peptide chain release factor 2 [Chlamydia trachomatis E/150] gi|296438780|gb|ADH20933.1| peptide chain release factor 2 [Chlamydia trachomatis E/11023] Length = 334 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 156/326 (47%), Positives = 204/326 (62%), Gaps = 1/326 (0%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 + W +V A + L +S E+++++ LE D + + Sbjct: 2 EQQAVQDGFWDDVARAGKISERIARLKQQLSEFNELKNKVSTIQFFLEDEESSKDLEMQK 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E + ++ + LLSGE D N +L ++AGAGGTES DW MLLRMY RWA Sbjct: 62 ELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRWAS 121 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 ++ E ++ DGE AGIK TL + G AYG+ K E GVHRLVRISP+DSN++RHTSF Sbjct: 122 SHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSF 181 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 S+ V+P +DD IE+EI D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ E Sbjct: 182 VSVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNE 241 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQ +N+ NMLRA++Y+ LQ+R E NI +K EI WG QIR+YV QPY +VKD+ Sbjct: 242 RSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDV 301 Query: 327 RTNIEKTSPSDVLDGD-LDDFMKATL 351 RT E + ++DG+ LD F+KA L Sbjct: 302 RTGYEVGNIQAMMDGELLDAFIKAYL 327 >gi|161507200|ref|YP_001577154.1| peptide chain release factor 2 [Lactobacillus helveticus DPC 4571] gi|160348189|gb|ABX26863.1| Peptide chain release factor 2 [Lactobacillus helveticus DPC 4571] gi|328461868|gb|EGF34090.1| peptide chain release factor 2 [Lactobacillus helveticus MTCC 5463] Length = 332 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 151/324 (46%), Positives = 200/324 (61%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 W + A+ L+ + L ++Q D L LEL E D + QE Sbjct: 1 MMQTGFWDDQEGAQKLISDNNLLKEKRDSFLKLQQDYEDELTALELLRAEPDADLQQEVE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +L+ ++ + + LLSG+ DS++A LE+H GAGGTE+ DW ML RMY R+ + Sbjct: 61 TDLKDLQEAFHNYELDLLLSGKYDSHNALLEIHPGAGGTEAMDWGQMLFRMYQRYCDAAG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E + GEEAG+KS ++ I G NAYG LK E GVHRLVRISP+D+ RRHTSF+S+ Sbjct: 121 FKFEINDYEPGEEAGLKSVSVRISGNNAYGMLKSENGVHRLVRISPFDAAKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DDSI+I+I D RID YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ Sbjct: 181 EVIPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A N LRAKL+ LE +K+ + + + EIGWG QIRSYV PY +VKDLRT Sbjct: 241 LQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + V+DG L F+ + L Sbjct: 301 YETADVNGVMDGKLQPFIYSYLQW 324 >gi|332299528|ref|YP_004441449.1| peptide chain release factor 2 [Porphyromonas asaccharolytica DSM 20707] gi|332176591|gb|AEE12281.1| peptide chain release factor 2 [Porphyromonas asaccharolytica DSM 20707] Length = 373 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 139/360 (38%), Positives = 211/360 (58%), Gaps = 11/360 (3%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + LG D D +L +T+ P W +V A+ MR + + I + Sbjct: 9 ELLERTKALGRYLDIDQRRVQLEEEELRTQAPDFWDDVPRAQQQMRRVGEIRSWIEAFEA 68 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + + ++ Q+ D R VE + ++LS E D A L++ Sbjct: 69 VDAATQEVALAYDFYK--EEAIEEQDVDDAYARAIKLVEDLELRNMLSAEEDRLGAVLKI 126 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTESQDWA+ML+RMY RWAE+ +K DG++AGIK+ T+ I+G AYG+L Sbjct: 127 NAGAGGTESQDWASMLVRMYQRWAERSGYKVTITNWQDGDDAGIKTVTMQIEGELAYGFL 186 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVR+SPY++ +R TSF+S++V P+VDDSIE+E++ DT+R+SGAGGQ Sbjct: 187 KSENGVHRLVRVSPYNAQGKRMTSFASVFVVPLVDDSIEVEVNPGLLSWDTFRSSGAGGQ 246 Query: 242 HVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 +VN ++ VR+ + T +V++ + RSQ N+ A +LR++LY+ EL++R Sbjct: 247 NVNKVETGVRLHYQYTDPDTGETEEIVIENTETRSQMDNRENALRLLRSQLYDKELERRR 306 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + E++K +I WG QIRSYV + VKD RT + + + V+DGDLD F+KA L Sbjct: 307 AAQSEVEANKKKIEWGSQIRSYVFDD-RRVKDHRTGYQTSDVNGVMDGDLDAFIKAYLMQ 365 >gi|154248590|ref|YP_001419548.1| peptide chain release factor 2 [Xanthobacter autotrophicus Py2] gi|154162675|gb|ABS69891.1| peptide chain release factor 2 [Xanthobacter autotrophicus Py2] Length = 322 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 189/309 (61%), Positives = 240/309 (77%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L++ + I + L DN+ L+EL E D ++ E S +L +K E+ ++ E Sbjct: 1 MQERTTLEDGLGAIDRVLRDLDDNIELIELGEAEGDEGVITEASASLDGLKAELARRELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEADSND+YLEVHAGAGGT+SQDWA MLLRMY RW E+ FK E ++ GE+AG+ Sbjct: 61 ALLSGEADSNDSYLEVHAGAGGTDSQDWAEMLLRMYRRWCERHGFKVELMDESQGEQAGL 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ +KG NAYGWLK E GVHRLVRISP+DSN+RR TSF+S+ VYPVVDD I ++I E Sbjct: 121 KSATIQVKGHNAYGWLKTEAGVHRLVRISPFDSNARRQTSFASVDVYPVVDDRIVVDIKE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D R+DT R+ GAGGQHVN T+SAVR+THIPTG+ V + +RSQHKN+A AWNMLRAKLY Sbjct: 181 ADVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGIAVVSEGDRSQHKNRATAWNMLRAKLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 +LEL+KRE A +++KT+IGWG QIRSYVLQPYQ+VKDLRT + +P +VLDGDLD Sbjct: 241 DLELKKREAEAAAEQAAKTDIGWGHQIRSYVLQPYQLVKDLRTGVTSGTPQEVLDGDLDP 300 Query: 346 FMKATLAIK 354 FM+A LA + Sbjct: 301 FMQAALAQR 309 >gi|257459323|ref|ZP_05624436.1| peptide chain release factor 2 [Campylobacter gracilis RM3268] gi|257443252|gb|EEV18382.1| peptide chain release factor 2 [Campylobacter gracilis RM3268] Length = 365 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 159/352 (45%), Positives = 225/352 (63%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS ++ + G+ +N RL + D +LWQ++ +A + +E+ + N ++ Sbjct: 13 LSIKVENIAGVVKPENIKARLKEIEELENDQNLWQDIAKAGAIGKEKTKISNILNKFLNA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ + D L ELA E+D + ++ ++ + +LSGE D +A + +H Sbjct: 73 KNAVDDAKALYELANSENDEETINSLFAEADELEDKIINLEISMMLSGENDDKNAIVSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTES DWA+ML RMY R+ E+ FK E L+ +GEEAG+K + +++G NAYG+LK Sbjct: 133 PGAGGTESNDWASMLYRMYLRFCEREGFKIEVLDFQEGEEAGLKDVSFIVRGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR+SP+DS RRHTSFSS+ V P ++D IEI I E D R+D +RASGAGGQH Sbjct: 193 AENGIHRLVRVSPFDSAGRRHTSFSSVMVSPELNDDIEINIEEKDIRVDVFRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +N T+SAVRITHIPTG+VV CQ +RSQHKNK A +L+++LYELEL K+ E Sbjct: 253 INKTESAVRITHIPTGIVVNCQNDRSQHKNKETAMKVLKSRLYELELMKQREKDENA--P 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ VKD R+ + +LDGD+ ++ L + Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAYSQTDAILDGDIKSIIEGVLISQ 362 >gi|68249924|ref|YP_249036.1| peptide chain release factor 1 [Haemophilus influenzae 86-028NP] gi|68058123|gb|AAX88376.1| peptide chain release factor 1 [Haemophilus influenzae 86-028NP] Length = 361 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 111/344 (32%), Positives = 180/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R L D + + + + +E L+ + + L Sbjct: 10 LESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQNIEEAEIL 69 Query: 76 ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q + + I+ + Q L D + YLE+ AG GG E+ +A Sbjct: 70 LDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 129 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE +++ E L ++ E+ G K + + G YG LK E G HR+ R+ Sbjct: 130 GDLFRMYSRYAESKRWCVEMLSANESEQGGYKEVIVKVSGEGVYGQLKFESGGHRVQRVP 189 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 190 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 249 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++ + + +G G + Sbjct: 250 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQ--TDMRRNLLGSGDRSDK 307 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +V++G +D+ ++ + + Sbjct: 308 IRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQPIITEYQ 350 >gi|170751458|ref|YP_001757718.1| peptide chain release factor 2 [Methylobacterium radiotolerans JCM 2831] gi|170657980|gb|ACB27035.1| peptide chain release factor 2 [Methylobacterium radiotolerans JCM 2831] Length = 321 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 218/309 (70%), Positives = 254/309 (82%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD A++ IK+++ L D L+EL E D S ++E + ++ E +Q E Sbjct: 1 MRERQQLDEAVTAIKKLERDLEDGATLIELGEMEGDESSIREGEAAILAVEKEAASRQVE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D YLEVHAGAGGTESQDWANML RMY RWAE+RK+K E +E+ DGEEAGI Sbjct: 61 TLLSGEADGFDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKYKVEVVEMTDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K ATLLIKG NAYGWLK E GVHRLVRISPYDS++RRHTSF+S+WVYPV+DD IEIEI E Sbjct: 121 KGATLLIKGHNAYGWLKTESGVHRLVRISPYDSSARRHTSFASVWVYPVIDDRIEIEIKE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYR+SGAGGQHVNTTDSAVRITH PTG+VV CQQERSQHKN+A AWNMLRA+LY Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHNPTGIVVACQQERSQHKNRATAWNMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ELEL+KREE AN ++KT+IGWG QIRSYVLQPYQ+VKDLRT + T P +VLDGDLD Sbjct: 241 ELELKKREEKANAEAAAKTDIGWGHQIRSYVLQPYQLVKDLRTGTQSTDPDEVLDGDLDP 300 Query: 346 FMKATLAIK 354 FM+A+LA + Sbjct: 301 FMEASLAQR 309 >gi|308050535|ref|YP_003914101.1| bacterial peptide chain release factor 1 (bRF-1) [Ferrimonas balearica DSM 9799] gi|307632725|gb|ADN77027.1| bacterial peptide chain release factor 1 (bRF-1) [Ferrimonas balearica DSM 9799] Length = 360 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 115/344 (33%), Positives = 180/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + +P + + + L +E L+ ++ Q D E+ Sbjct: 9 LEGLQERYEEVQALLGEPDVIADQDRFRQLSKEYSQLEAVVNAFLAYQQNQEDIATATEM 68 Query: 76 ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E + + + Q L D A++E+ AGAGG E+ +A Sbjct: 69 LADPEMKEMAEEELAEARAQTEALEQELQILLLPKDPNDDRSAFVEIRAGAGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY+R+AE++ + E + DGE G K G + YG LK E G HR+ R+ Sbjct: 129 GDLLRMYSRYAEQKGWSVELMSASDGEHGGYKEVIAKFSGDSVYGELKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P V ++ IEI+ +D ++DT+RASGAGGQHVN TDSAVRITH Sbjct: 189 ATESQGRIHTSACTVVVMPEVPEAEAIEINPADLKVDTFRASGAGGQHVNKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG VV+CQ ERSQHKN+A+A +L A+L E +KR+ + ++ + G + Sbjct: 249 LPTGTVVECQDERSQHKNRAKAMAVLSARLQAAEDEKRKAE--ETSTRRSLVASGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ ++V++G+L M+ L + Sbjct: 307 IRTYNY-PQGRVSDHRINLTLYRLTEVMEGELSALMQPILQEHQ 349 >gi|218768706|ref|YP_002343218.1| peptide chain release factor 1 [Neisseria meningitidis Z2491] gi|20139350|sp|Q9JT75|RF1_NEIMA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|121052714|emb|CAM09057.1| peptide chain release factor I [Neisseria meningitidis Z2491] Length = 358 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 120/349 (34%), Positives = 175/349 (50%), Gaps = 8/349 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + RL + P ++ + L RE L + + + D Sbjct: 4 SILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQSDLA 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E+ + + E + + Q L D + ++E+ AG GG E Sbjct: 64 DAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIRAGTGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY+R+AE+ +++ E + ++ E G K I G AY LK E G HR Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ V P D+ +IE++ +D RIDT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGDL + A +A + Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITNALIAEHQ 349 >gi|153854177|ref|ZP_01995485.1| hypothetical protein DORLON_01476 [Dorea longicatena DSM 13814] gi|149753226|gb|EDM63157.1| hypothetical protein DORLON_01476 [Dorea longicatena DSM 13814] Length = 358 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 121/351 (34%), Positives = 190/351 (54%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ RL + + ++P + + + LM+E+ L + E ++ Sbjct: 1 MFDKLEDLRIRLDEILNELQEPDVANDQNRFRKLMKEQNDLTPIVEAYNEYKECKQAIED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 LE+ EE D + + + L K VE + L D + +E+ AGAGG Sbjct: 61 SLEMLEEESDEEMRELAKEELNDNKKRVEELEQELKILLLPKDPNDEKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY +AE +++K E +E + G+K+ T +I G AY +K E GV Sbjct: 121 DEAALFAAEIYRMYMHYAESQRWKVELVECEEIGIGGMKNVTFMIDGKGAYSKMKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P + ++I+I E D RID RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMP-EAEDVDIQIDEKDIRIDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+V+ Q E+SQ +NK +A+ +LRAKLY+LE QKR + E+ K++IG Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKDKAFALLRAKLYDLECQKRHD--AEAEARKSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++GD+ + + A +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIGLTLYKLDKIMNGDIQEIIDACIAADQ 347 >gi|15807620|ref|NP_293897.1| peptide chain release factor 2 [Deinococcus radiodurans R1] Length = 421 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 141/344 (40%), Positives = 203/344 (59%), Gaps = 6/344 (1%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 G FD +RL+ L+ + DP LW + A+ + +E + + + Sbjct: 69 GSTFDIPGKTRRLNELDRELSDPDLWNDQSRARQVTQEAGSVRKIVEEYAGLTSDAQGLS 128 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +L+LA EE+ + E + + V+ E+L + + A + V GAGGTE+ Sbjct: 129 EMLDLADEEERELLEDEQAGL----QKRVDDLYRETLFTMKHADTAAIVRVKGGAGGTEA 184 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA ML RMY RWAE+R +K + L+ G++AG +S +I+G A+G + E GVHRL Sbjct: 185 QDWAGMLARMYMRWAERRGYKVDILDEVAGDQAGYQSIEFIIRGEKAFGMMAPEHGVHRL 244 Query: 191 VRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 VR+SP+DSN+RR TSF+S+ V P ++ I I I +SD R D +R+ GAGGQ VNTTDSA Sbjct: 245 VRVSPFDSNNRRQTSFASVDVVPEVPEEEINIHIPDSDLRRDVFRSQGAGGQGVNTTDSA 304 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+TH+PTG+ V CQ RSQ KN A +L+ +LY++E++KRE + ++ WG Sbjct: 305 VRLTHLPTGIAVACQITRSQIKNHELALQILKQRLYDIEMKKREAEELAARGQQAKVEWG 364 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 Q+RSYVL +KD RT + +P DVLDGDLD+ M A L Sbjct: 365 SQMRSYVLDKQ-YIKDHRTGLMMHNPDDVLDGDLDELMWAGLEW 407 >gi|325660746|ref|ZP_08149374.1| peptide chain release factor 1 [Lachnospiraceae bacterium 4_1_37FAA] gi|325472820|gb|EGC76030.1| peptide chain release factor 1 [Lachnospiraceae bacterium 4_1_37FAA] Length = 356 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 115/351 (32%), Positives = 187/351 (53%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ + R + + ++P + + + LM+E+ L + E + Sbjct: 1 MFDKLEDLLIRYEEIMGELQEPDVANDQERFRKLMKEQADLAPIVEAYTEYKKAKQSIAD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127 E+ E D + + + L K VE + E D + +E+ AGAGG Sbjct: 61 SEEMLEIESDEEMRELAKEELSSSKKRVEELEHELKILLLPKDPNDDKNIMVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 ES +A + RMY +AE +++KTE + +++ G K ++ G Y +K E GV Sbjct: 121 DESALFAAEVYRMYVHYAESKRWKTEMISVNENGIGGFKEVVFMVSGQGVYSRMKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P + +++ I E D RID RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMP-EAEEVDVVIEEKDIRIDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+V+ Q E+SQ +NK +A+ +LR+KLYELEL+K++ + E+ +++IG Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQ--SAEAEARRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L+GDLD+ + + +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSILNGDLDEVIDSLIAADQ 347 >gi|307719604|ref|YP_003875136.1| peptide chain release factor 1 [Spirochaeta thermophila DSM 6192] gi|306533329|gb|ADN02863.1| peptide chain release factor 1 [Spirochaeta thermophila DSM 6192] Length = 357 Score = 239 bits (610), Expect = 4e-61, Method: Composition-based stats. Identities = 115/342 (33%), Positives = 180/342 (52%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + R L DP ++ + + L +E HL + +E + + Sbjct: 7 IEELITRFKELEEALADPSIFNDQKRYRELAQEHAHLSQVVRTAEEYRRLEARLEEAKTV 66 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 EEDD + + + ++ ++ ++ + + + D + LE+ AG GG E+ Sbjct: 67 LEEEDDHELKEMAREEIKALEDQILHTEQRLKLLLVPPDPLDGKNIILEIRAGTGGEEAA 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R+AE++ +K E +E + E G + I G YG L+ E G HR+ Sbjct: 127 LFAADLYRMYARYAERKGWKMEIMEASETELGGFRELVCAISGKEVYGHLRFESGGHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS ++ V P +++ I D R+D +R+SG GGQ VNTTDSAVR Sbjct: 187 RIPVTESGGRIHTSAVTVAVLPEPEETEVE-IRPEDIRVDVFRSSGPGGQSVNTTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV CQ E+SQHKNKA+A +LRA+LY E++K+ + + +++IG G Sbjct: 246 ITHLPTGLVVTCQDEKSQHKNKAKALKILRARLY--EMEKQRQESERAAMRRSQIGSGDR 303 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R N+ V+DGDLD+ + A Sbjct: 304 SERIRTYNF-PQNRVTDHRINLTLYKLEAVMDGDLDEIIDAL 344 >gi|304438485|ref|ZP_07398425.1| peptide chain release factor RF1 [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368568|gb|EFM22253.1| peptide chain release factor RF1 [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 354 Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats. Identities = 111/346 (32%), Positives = 174/346 (50%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL---CDNLIL 72 + L T DP + ++ + RE L + + + L ++ + Sbjct: 5 LAAVEDKYRELETLLSDPSVMADMAVWQRYTREHAALTPIVEAYQSYRRALATIDEDKEM 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L A E + +E ++ L D + +E+ G GG E+ Sbjct: 65 LAEADAEMKAMLTEEIAEAEAERDRLAAELPILLLPRDPNDDKNVIVEIRGGVGGEEAAL 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY R+AE++ ++TE L + E G K T L+ G AY LK E G HR+ R Sbjct: 125 FAASLFRMYARYAERQGWRTEVLSSNPTEIGGFKEITFLVSGAGAYSKLKYESGTHRVQR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 I +S R HTS ++ V P + +E+ I +D RIDTY ASGAGGQ+VN T++A+RI Sbjct: 185 IPVTESGGRIHTSAVTVAVLP-EAEEVEVTIDPNDLRIDTYCASGAGGQYVNRTETAIRI 243 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VVQCQ E+SQ KN+ +A +LRA+LY+ ++E+ + ++++G G Sbjct: 244 THIPTGIVVQCQDEKSQLKNREKAMKVLRARLYD--RAQQEQADAVAADRRSQVGSGDRS 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + V+DG+LD+ + + + Sbjct: 302 ERIRTYNF-PQGRVTDHRIGLTLYKIDAVMDGELDELLAGLITADQ 346 >gi|255327042|ref|ZP_05368118.1| peptide chain release factor 2 [Rothia mucilaginosa ATCC 25296] gi|255296259|gb|EET75600.1| peptide chain release factor 2 [Rothia mucilaginosa ATCC 25296] Length = 375 Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats. Identities = 137/356 (38%), Positives = 216/356 (60%), Gaps = 4/356 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + D + + + L+ + P LW +V A+ + + + ++ ++ Sbjct: 12 ELRAIFTSIAAVSDIEGIERAIEDLSAQAAAPDLWDDVENAQKVTSALSYKQSELNRLRS 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQ---ETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 + R+ D +++ELA ED+ + + + I+ ++E + LLSGE D +A Sbjct: 72 LSSRIDDVEVMVELAEAEDEETAAELLADAERECAEIRAKLEELEVLVLLSGEYDQREAV 131 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + + +GAGG ++ D+A MLLRMY RWAEK + T+ L+ EEAG+KS T + P A+ Sbjct: 132 VTIRSGAGGVDAADFAEMLLRMYLRWAEKNGYPTKVLDTSYAEEAGLKSVTFEVNAPYAF 191 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G L E G HRLVRISP+D+ RR TSF+++ V P+++ + IEI ES+ ++D +R+SG Sbjct: 192 GRLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDAIEIPESEIKVDVFRSSGP 251 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTTDSAVR+TH+PTG+VV Q E+SQ +N+A A +L+++L L ++ + Sbjct: 252 GGQSVNTTDSAVRMTHLPTGIVVSMQNEKSQLQNRAAALRVLQSRLLLLRKEQEDAKKKE 311 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E+ + S+VLDG L+ F+ A + + Sbjct: 312 LAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYEEGNTSNVLDGGLNAFIDAGIRWR 366 >gi|308389808|gb|ADO32128.1| peptide chain release factor I [Neisseria meningitidis alpha710] gi|325130724|gb|EGC53462.1| peptide chain release factor 1 [Neisseria meningitidis OX99.30304] gi|325136665|gb|EGC59265.1| peptide chain release factor 1 [Neisseria meningitidis M0579] gi|325201657|gb|ADY97111.1| peptide chain release factor 1 [Neisseria meningitidis M01-240149] gi|325208608|gb|ADZ04060.1| peptide chain release factor 1 [Neisseria meningitidis NZ-05/33] Length = 358 Score = 239 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 120/349 (34%), Positives = 175/349 (50%), Gaps = 8/349 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + RL + P ++ + L RE L + + + D Sbjct: 4 SILEKLQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAELTPVVEVFQNYRLAQSDLA 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E+ + + E + + Q L D + ++E+ AG GG E Sbjct: 64 DAEEMLSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEIRAGTGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY+R+AE+ +++ E + ++ E G K I G AY LK E G HR Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ V P D+ +IE++ +D RIDT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGDL + A +A + Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITNALIAEHQ 349 >gi|254456112|ref|ZP_05069541.1| peptide chain release factor 2 [Candidatus Pelagibacter sp. HTCC7211] gi|207083114|gb|EDZ60540.1| peptide chain release factor 2 [Candidatus Pelagibacter sp. HTCC7211] Length = 326 Score = 239 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 175/322 (54%), Positives = 243/322 (75%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 + + WQ+ +K +++E++ ++ ++ K ++L D + ELA EE++ ++ +E Sbjct: 1 MLEANFWQDKNNSKNIIKEKKLYEDLLNIHKASIEKLIDLNDISELAAEEENQAVQKEIL 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 N++ ++ V+ + + LS E DS D Y+E+HAGAGGTESQDWA ML RMY +WA+++ Sbjct: 61 QNIKDLRDLVKTNEIKCFLSNETDSLDCYIEIHAGAGGTESQDWAEMLRRMYLKWADQKN 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK+ + H G+EAGIKS+T+ I+G +GWLK E G+HRLVRISP+DS +RRHTSF+SI Sbjct: 121 FKSNLISEHKGDEAGIKSSTIKIEGDYVFGWLKKESGIHRLVRISPFDSGARRHTSFASI 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 WVYPVVD++I IEI E D RIDTYR+SGAGGQHVNTTDSAVRITHIP+ +VVQCQ ERSQ Sbjct: 181 WVYPVVDENINIEIIEKDLRIDTYRSSGAGGQHVNTTDSAVRITHIPSKIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 HKNK NML+A+LY+ E++K+E+ E+SK+EIGWG QIRSYVLQPY++VKD RTN Sbjct: 241 HKNKETCINMLKARLYDYEIKKKEQKNQNTENSKSEIGWGHQIRSYVLQPYRLVKDNRTN 300 Query: 330 IEKTSPSDVLDGDLDDFMKATL 351 E T+P +LDG++D F++ +L Sbjct: 301 FESTNPDKILDGEIDGFLEQSL 322 >gi|239907764|ref|YP_002954505.1| peptide chain release factor 1 [Desulfovibrio magneticus RS-1] gi|259585220|sp|C4XIQ1|RF1_DESMR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|239797630|dbj|BAH76619.1| peptide chain release factor 1 [Desulfovibrio magneticus RS-1] Length = 357 Score = 239 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 110/346 (31%), Positives = 173/346 (50%), Gaps = 11/346 (3%) Query: 13 LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68 +F ++ ++ L + P + + + L + L + ++ +E + L D Sbjct: 1 MFAKLESLERKYEDLERQLSAPDVVSDQERFRKLSKTHSDLSDVVAAFREYKKIAQDLED 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 N + + E ET + + L D + LE+ AG GG Sbjct: 61 NQEMAQDPDPEIRELAQAETKALKEAQVELEARLKVLLLPKDPMDEKNILLEIRAGTGGD 120 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMYTR+AE +++K E + + G K I G Y LK E G H Sbjct: 121 EAALFAGDLFRMYTRYAETKRWKVEIMSQSETGSGGFKEVIASISGDKVYSRLKYESGAH 180 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS ++ + P + +++ I ++ RID YR+SG GGQ VNTTDS Sbjct: 181 RVQRVPATESQGRIHTSAVTVAIMP-EAEEVDVAIDPNELRIDVYRSSGPGGQSVNTTDS 239 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+THIP+G+VV CQ E+SQHKNKA+A +LR++L ++E K+ ++++G Sbjct: 240 AVRVTHIPSGLVVICQDEKSQHKNKAKALKVLRSRLLQVEQDKQRAEQEAA--RRSQVGT 297 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G +IR+Y P V D R N+ VL+GDLD+ A + Sbjct: 298 GDRSERIRTYNF-PQGRVTDHRINLTLYRLDAVLEGDLDELCGALI 342 >gi|187931103|ref|YP_001891087.1| peptide chain release factor 1 [Francisella tularensis subsp. mediasiatica FSC147] gi|238691540|sp|B2SFF6|RF1_FRATM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|187712012|gb|ACD30309.1| peptide chain release factor 1 [Francisella tularensis subsp. mediasiatica FSC147] Length = 361 Score = 239 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 115/346 (33%), Positives = 186/346 (53%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R ++ + + + + + L +E HL+ + KE L D E+ Sbjct: 9 LQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALEDKQAAYEM 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + + + I+ Q L D + +LE+ AG GG E+ Sbjct: 69 LNEKDAELVEMAKEELKLANEAIEKLESELQIFLLPRDPNDDANVFLEIRAGTGGDEASI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L +MY+++AE+R +K E + +GE G K I G Y LK E G HR+ R Sbjct: 129 FSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ I+I+ +D ++DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++ ++ K+ +G G Sbjct: 249 THIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQ--SDTRKSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +V++G LD ++ + + Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLILEHQ 351 >gi|325109320|ref|YP_004270388.1| bacterial peptide chain release factor 2 (bRF-2) [Planctomyces brasiliensis DSM 5305] gi|324969588|gb|ADY60366.1| bacterial peptide chain release factor 2 (bRF-2) [Planctomyces brasiliensis DSM 5305] Length = 373 Score = 239 bits (609), Expect = 5e-61, Method: Composition-based stats. Identities = 160/353 (45%), Positives = 229/353 (64%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +++ L D+D +++ +N + P W N +A+ M E + L + ++ ++E+ Sbjct: 12 LMKRILYLKDSLDYDVKCEQVKEINDRMAQPGFWDNQEKAQETMAELRRLKSLVTPLEEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 D +LLE A +D +QE + R+ V+ +F+ LL D+ +AY+ + Sbjct: 72 VQGRDDLEVLLEFAEADDSEETVQEITSTCDRLGSIVDKVEFQLLLGQPEDALNAYVTIQ 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AG GGT++ DWA MLLRMY RWAEK + TE LE D EEAGI+ ATLLIKG A+G+LK Sbjct: 132 AGEGGTDAADWAEMLLRMYIRWAEKEEMATELLERTDAEEAGIRHATLLIKGDYAFGYLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE-SDCRIDTYRASGAGGQ 241 GE G HRLVR+SP++S +R T+F+++ V P VDDS EI+I +D DT RA GAGGQ Sbjct: 192 GESGNHRLVRMSPFNSAGKRQTAFAAVDVTPEVDDSFEIDIDWDNDVDEDTMRAGGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVR+TH +G+VV+CQ ERSQH+N+A A ML AKLY++E++KRE Sbjct: 252 HVNKTESAVRLTHKESGLVVRCQNERSQHQNRASARKMLTAKLYQMEIEKRESENAARRG 311 Query: 302 SKTEIGW-GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++IG+ G IR+YVLQP Q VKD R+ ++ +P VL+G+LD F++A L Sbjct: 312 EKSKIGFGGETIRNYVLQPEQFVKDTRSELKTANPLTVLEGELDPFLEAYLKW 364 >gi|328543671|ref|YP_004303780.1| peptide chain release factor 2 [polymorphum gilvum SL003B-26A1] gi|326413415|gb|ADZ70478.1| Peptide chain release factor 2 [Polymorphum gilvum SL003B-26A1] Length = 323 Score = 239 bits (609), Expect = 6e-61, Method: Composition-based stats. Identities = 224/309 (72%), Positives = 257/309 (83%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD I+ ++ ++ L DN+ L+EL E D S++ E + L+ +K EV Q Sbjct: 1 MRERQQLDEGITGVRRLESELSDNIELIELGDLEGDKSVVNEAEEALRGLKDEVLKLQMA 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD ND YLE++AGAGGTESQDWA+MLLRMY RWAEKR +K E LE+HDGEEAGI Sbjct: 61 SLLSGEADGNDTYLEINAGAGGTESQDWASMLLRMYRRWAEKRGYKVELLEVHDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLLIKG NAYGWLK E GVHRLVRISPYDS +RRHTSF+S WVYPVVDDSIEI+I+E Sbjct: 121 KSATLLIKGENAYGWLKTESGVHRLVRISPYDSQARRHTSFASAWVYPVVDDSIEIDINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG+VVQCQ ERSQHKN+A AW ML+A++Y Sbjct: 181 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGIVVQCQSERSQHKNRATAWAMLKARMY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E ELQKREE A+ +SKT IGWG QIRSYVLQPYQMVKDLRT +E +SP DVL+GDLD Sbjct: 241 EAELQKREEAASAEAASKTSIGWGHQIRSYVLQPYQMVKDLRTGVESSSPDDVLNGDLDP 300 Query: 346 FMKATLAIK 354 FM+A LA + Sbjct: 301 FMEAALAQR 309 >gi|241760302|ref|ZP_04758397.1| peptide chain release factor 1 [Neisseria flavescens SK114] gi|241319180|gb|EER55658.1| peptide chain release factor 1 [Neisseria flavescens SK114] Length = 358 Score = 239 bits (609), Expect = 6e-61, Method: Composition-based stats. Identities = 119/344 (34%), Positives = 173/344 (50%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 RL + P ++ + L RE + + + D E+ Sbjct: 9 LQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAEITPVVETFHQYMQAQNDMAEAQEM 68 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + E + + Q L D + ++EV AG GG E+ +A Sbjct: 69 LSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY+R+AE+ +++ E + ++ E G K I G AY LK E G HR+ R+ Sbjct: 129 GDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ +IE++ +D RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 189 ATENQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G + Sbjct: 249 LPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ V+DGDL++ A +A + Sbjct: 307 IRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQ 349 >gi|238927406|ref|ZP_04659166.1| peptide chain release factor RF1 [Selenomonas flueggei ATCC 43531] gi|238884688|gb|EEQ48326.1| peptide chain release factor RF1 [Selenomonas flueggei ATCC 43531] Length = 354 Score = 239 bits (609), Expect = 6e-61, Method: Composition-based stats. Identities = 111/346 (32%), Positives = 173/346 (50%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL---CDNLIL 72 + L T DP + ++ + RE L + + + L ++ + Sbjct: 5 LAAVADKYRELETLLSDPSVMADMEAWQRYTREHAALTPIVEAYQAYRRALAIIDEDKEM 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L A E + +E + L D + +E+ G GG E+ Sbjct: 65 LSEADAEMKAMLTEEIAAAEAERDRLAAELPILLLPRDPNDEKNVIVEIRGGVGGEEAAL 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY R+AE++ ++TE L + E G K T L+ G AY LK E G HR+ R Sbjct: 125 FAASLFRMYVRYAERQGWRTEVLSSNPTEIGGFKEITFLVSGTAAYSKLKYESGTHRVQR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 I +S R HTS ++ V P + +E+ I +D RIDTY ASGAGGQ+VN T++A+RI Sbjct: 185 IPVTESGGRIHTSAVTVAVLP-EAEEVEVTIDPNDLRIDTYCASGAGGQYVNRTETAIRI 243 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VVQCQ E+SQ KN+ +A +LRA+LY+ ++E+ + ++++G G Sbjct: 244 THIPTGIVVQCQDEKSQLKNREKAMKVLRARLYD--RAQQEQADAVAADRRSQVGSGDRS 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + V+DG+LD+ + + + Sbjct: 302 ERIRTYNF-PQGRVTDHRIGLTLYKIDAVMDGELDELLAGLITADQ 346 >gi|170723617|ref|YP_001751305.1| peptide chain release factor 1 [Pseudomonas putida W619] gi|229470352|sp|B1JEP6|RF1_PSEPW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|169761620|gb|ACA74936.1| peptide chain release factor 1 [Pseudomonas putida W619] Length = 360 Score = 239 bits (609), Expect = 6e-61, Method: Composition-based stats. Identities = 121/346 (34%), Positives = 176/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + RE ++ I KE + D L Sbjct: 9 LDTLQDRFEELTALLGDAEVISDQARFRAYSREYSEVEPVIGAYKEWRKVQDDLEGAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLE---VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + + Q L D + +LE+ AG GG E+ Sbjct: 69 LKDADPDMREMAVEEVREAKEQLVGLESQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AE+R ++ E L ++GE G K ++G + YG LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAERRGWRLEILSENEGEHGGYKEIIARVEGDSVYGKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ + IEI+ +D R+DTYRASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQVAIEINPADLRVDTYRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ+ERSQHKN+A+A + L AKL + +Q I K +G G Sbjct: 249 THLPTGIVVECQEERSQHKNRARAMSWLSAKLND--MQTSAAQNAIASERKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ S D+L G +D ++ LA + Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYSLDDILAGGVDAVIEPLLAEYQ 351 >gi|296436914|gb|ADH19084.1| peptide chain release factor 2 [Chlamydia trachomatis G/11222] Length = 334 Score = 239 bits (609), Expect = 6e-61, Method: Composition-based stats. Identities = 155/326 (47%), Positives = 206/326 (63%), Gaps = 1/326 (0%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 + W +V+ A + L +S E+++++ LE D + + Sbjct: 2 EQQAVQDGFWDDVVRAGKISERIARLKQQLSEFNELKNKVSAIQFFLEDEESSKDLEMQK 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E + ++ + LLSGE D N +L ++AGAGGTES DW MLLRMY RWA Sbjct: 62 ELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRWAS 121 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 ++ E ++ DGE AGIK TL + G AYG+ K E GVHRLVRISP+DSN++RHTSF Sbjct: 122 SHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSF 181 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S+ V+P +D+ IE+EI D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ E Sbjct: 182 ASVEVFPEIDNKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNE 241 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQ +N+ NMLRA++Y+ LQ+R E NI +K EI WG QIR+YV QPY +VKD+ Sbjct: 242 RSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDV 301 Query: 327 RTNIEKTSPSDVLDGD-LDDFMKATL 351 RT E + ++DG+ LD F+KA L Sbjct: 302 RTGYEVGNIQAMMDGELLDAFIKAYL 327 >gi|317495961|ref|ZP_07954323.1| peptide chain release 2 [Gemella moribillum M424] gi|316913865|gb|EFV35349.1| peptide chain release 2 [Gemella moribillum M424] Length = 372 Score = 239 bits (609), Expect = 6e-61, Method: Composition-based stats. Identities = 156/351 (44%), Positives = 219/351 (62%), Gaps = 1/351 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++++Q+ + QR++ + D W + A L+ E + + + Sbjct: 12 EVNKQITEFKTSLKIEEKEQRVAEIENMMLDADFWNDSETASTLVTESKSIKKELDEFSA 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + D L + ++E +EDD I QE + ++ +K +VE F L + E D+N A LE+ Sbjct: 72 MLDYLNHSEEMIEFLNDEDDEEIYQELIETVRDLKQQVEDFSFRLLFAEEYDNNTAILEI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HAGAGGT++ DWA ++LRMY R+ K+ L G+ G+KSATL I+G AYG L Sbjct: 132 HAGAGGTDATDWAEIMLRMYERFFSKQGLTYSYLNYQSGDITGVKSATLKIEGDFAYGLL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI-EIEISESDCRIDTYRASGAGG 240 KGE+GVHR+VRISP+D + +RHTSF+SI V P D IEI+ D +IDTYRA GAGG Sbjct: 192 KGEKGVHRVVRISPFDPSGKRHTSFASIDVIPEFSDEEANIEINIEDLKIDTYRAQGAGG 251 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QH+NTTDSAVRITH+PTG+VVQ Q ERSQ KN+ A L++KL++LEL+++E Sbjct: 252 QHINTTDSAVRITHLPTGIVVQSQAERSQIKNRDFAMKNLKSKLHQLELEEKERELASIR 311 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + +IGWG QIRSYV PY MVKD RTN E ++ V+DG++ DF+ A L Sbjct: 312 GEQKDIGWGSQIRSYVFTPYTMVKDHRTNYEVSTVDKVMDGEIIDFIDAYL 362 >gi|255987637|ref|YP_001884728.2| peptide chain release factor 2 [Clostridium botulinum B str. Eklund 17B] gi|255961470|gb|ACD21926.2| peptide chain release factor 2 [Clostridium botulinum B str. Eklund 17B] Length = 325 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 153/326 (46%), Positives = 220/326 (67%), Gaps = 1/326 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++ W + A+ + +E + + + I ++ ++ +L D +L E+ ++D+ S + Sbjct: 1 MQEDGFWNDTKRAEEITKESKRIKDKIQRVESVRSKLDDIEVLKEIMDDDDEESAYE-II 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +N++ I+ E++ E LLSGE D N+A L +H G GGT++ DW MLLRMYTRW EK+ Sbjct: 60 NNIKEIEEEIDNYNMEILLSGEYDKNNAILTLHVGVGGTDANDWTEMLLRMYTRWCEKKN 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K E +++ +G+EAGIKS TL + G AYG+LK E+G+HRLVRISP+++N +R TSF+S+ Sbjct: 120 YKVEMIDLLEGDEAGIKSVTLKVIGEYAYGYLKAEKGIHRLVRISPFNANGKRQTSFASM 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + +I+I D +IDTYRASGAGGQH+N TDSAVRITH+PTGVVVQCQ ERSQ Sbjct: 180 EVLPELTKEQDIDIRSEDIKIDTYRASGAGGQHINKTDSAVRITHLPTGVVVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 NK A ML+AKL EL+ + +E ++GWG QIRSYV PY +VKD RTN Sbjct: 240 FSNKDTAMGMLKAKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTN 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355 +E ++ + V+DGDLD F+ + L K Sbjct: 300 VEVSNVTAVMDGDLDLFVNSYLKSLK 325 >gi|294669176|ref|ZP_06734256.1| peptide chain release factor 1 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308808|gb|EFE50051.1| peptide chain release factor 1 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 358 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 118/345 (34%), Positives = 175/345 (50%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 RL + P ++ + L RE + + + D E+ Sbjct: 9 LQQLSDRLEEVTALLGSPEATSDMGNYRKLTREHAEITPVVETFHQYMQAQNDMAEAQEM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGTESQDW 133 + + + K++ + + L D + ++EV AG GG E+ + Sbjct: 69 LSDPE-MKDFATEEIEAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAALF 127 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A LLRMY+R+AE+ +++ E + ++ E G K I G AY LK E G HR+ R+ Sbjct: 128 AGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQRV 187 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +S R HTS ++ V P D+ +IE++ +D RIDT+RASGAGGQH+N TDSAVRIT Sbjct: 188 PATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRIT 247 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H+PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G Sbjct: 248 HLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSGDRSE 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGD+++ A +A + Sbjct: 306 RIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDMEEITNALIAEHQ 349 >gi|218133361|ref|ZP_03462165.1| hypothetical protein BACPEC_01226 [Bacteroides pectinophilus ATCC 43243] gi|217992234|gb|EEC58238.1| hypothetical protein BACPEC_01226 [Bacteroides pectinophilus ATCC 43243] Length = 363 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 118/362 (32%), Positives = 190/362 (52%), Gaps = 16/362 (4%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 M++S + G ++ V R + + +P + + + LM+E+ + ++ Sbjct: 1 MEIS--MEIFGR---LEDLVHRYEDITLELSNPDVVNDQKRFRDLMKEQNDITPIVNAYN 55 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSND 116 E + + L + EE+D + + + L K E + L D D Sbjct: 56 EYKSCKQNIEDSLTMLDEENDEELKELAKEELNDSKKRAEELENELKILLLPKDPNDDKD 115 Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 +E+ AGAGG E+ +A L RMYT +AE R++K E + + G+K ++KG Sbjct: 116 IIVEIRAGAGGDEAALFAAELFRMYTHYAESRRWKVEVVNSDETGIGGMKEIEFMVKGQG 175 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 AY LK E GVHR+ R+ +S R HTS +++ V P + ++++I E D RID RAS Sbjct: 176 AYSVLKYESGVHRVQRVPETESGGRIHTSTATVAVMP-EAEEVDVQIDEKDIRIDVMRAS 234 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQ VNTTDSAVR+TH PTG+V+ Q E+SQ +NK +A+ +LRAKLY++E QK Sbjct: 235 GNGGQCVNTTDSAVRLTHYPTGIVIYSQTEKSQIQNKEKAFALLRAKLYDMECQK--AHD 292 Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 ++ +++IG G +IR+Y P V D R + ++DGD+ + + A +A Sbjct: 293 AEADARRSQIGTGDRSEKIRTYNF-PQGRVTDHRIGLTLYKLDKIMDGDIQEIIDACIAA 351 Query: 354 KK 355 + Sbjct: 352 DQ 353 >gi|50954999|ref|YP_062287.1| peptide chain release factor 2 [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951481|gb|AAT89182.1| peptide chain release factor 2 [Leifsonia xyli subsp. xyli str. CTCB07] Length = 372 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 138/353 (39%), Positives = 210/353 (59%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L L + + D D ++ L+ + P LW + + A+ + H + ++ I Sbjct: 12 ELRSTLADITAVVDVDKLRAAIADLSERAGAPDLWDDPVNAQKVTSALSHRQSELARITA 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 IQ RL D +L+ELA E DD E L+ ++ + + ++LLSGE D A + + Sbjct: 72 IQQRLDDLEVLVELANEGDDEESAAEARAELEALQKALGDLEVQTLLSGEYDERAAIVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A MLLRMY RWAE+ K+ ++ E AGIKSAT + P A+G L Sbjct: 132 RSGAGGDDATDFAEMLLRMYLRWAEQHKYPVTVMDTSYAEGAGIKSATFEVDMPYAFGTL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRL RISP+ S +R TSF+++ V P+++++ ++++ E D R+D +R+SG GGQ Sbjct: 192 SVEAGTHRLARISPFGSADKRQTSFAAVEVIPLMEEANQVDVPEGDIRVDVFRSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+TH+PTG+VV Q E+SQ +N+A A +L+ +L L+ ++ Sbjct: 252 SVNTTDSAVRLTHLPTGIVVSMQNEKSQIQNRAAAMRVLQTRLLLLQKEEEAAKKKELAG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + T WG Q+RSY L Q+VKDLRT E +P+ V DGDLD F+ A + + Sbjct: 312 NIT-ASWGDQMRSYFLYGQQLVKDLRTGYESGNPATVFDGDLDGFIAAGIRWR 363 >gi|61252075|sp|P43917|RF1_HAEIN RecName: Full=Peptide chain release factor 1; Short=RF-1 Length = 360 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 111/344 (32%), Positives = 181/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R L D + + + + +E L+ + + L Sbjct: 9 LESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQNIEEAEIL 68 Query: 76 ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q + + I+ + Q L D + YLE+ AG GG E+ +A Sbjct: 69 LDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE ++++ E L ++ E+ G K + + G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVTGEGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++ + + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQ--TDMRRNLLGSGDRSDK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +V++G +D+ ++ + + Sbjct: 307 IRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQPIITEYQ 349 >gi|113461093|ref|YP_719161.1| peptide chain release factor 1 [Haemophilus somnus 129PT] gi|119361547|sp|Q0I3B5|RF1_HAES1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|112823136|gb|ABI25225.1| bacterial peptide chain release factor 1 (bRF-1) [Haemophilus somnus 129PT] Length = 360 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 112/344 (32%), Positives = 185/344 (53%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R L +P + + + + +E L++ + + L Sbjct: 9 LESLKERHEELEALLGEPSVINDQDKFRAYSKEYAQLEDVVKCFARWNWLNNNIEETQLL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + + + + E + Q L D +AYLE+ AG GG E+ +A Sbjct: 69 LDDPDMKEMAELEIEESKAEIENAEQQLQILLLPKDPNDEYNAYLEIRAGTGGDEAGIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE ++++ E L ++ E+ G K + + G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESKRWRVEVLNANESEQGGYKEIIVKVNGEGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ EI+ SD RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 189 KTESQGRIHTSACTVAVMPELPENEMPEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++ + ++ + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKALSVLASRIAQAEQERQAQAQ--ADTRRNLLGSGDRSDK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +V++G +D+ ++ + + Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 349 >gi|326511439|dbj|BAJ87733.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 517 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 133/358 (37%), Positives = 213/358 (59%), Gaps = 4/358 (1%) Query: 1 MKLS-RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59 ++L+ ++N + + ++ ++ L K+ D LW + +A+ L+ L + + Sbjct: 149 VELAVERVNEVRQDAGLEQLLEEIASLENKSGDSTLWDDPSKAQELLVALTELKEKVKLL 208 Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSGEADSNDA 117 + + ++ + +++L E D + ++ + LLSG D + A Sbjct: 209 NDFKSQVEEADTIVQLTEELDSIDTGLLEEASKIIKALNKALDNFEMTRLLSGPYDKDGA 268 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 + + AGAGGT++QDWA+MLLRMY RW EK+++K+ +E GEEAGIKSAT+ ++G A Sbjct: 269 VITISAGAGGTDAQDWADMLLRMYVRWGEKQRYKSRVVEKSPGEEAGIKSATVELEGRYA 328 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRAS 236 YG+L GE+G HR+VR SP+++ R TSF+ + V P+ ++S+++EI E D I RA Sbjct: 329 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESLDVEIPEEDLDISFTRAG 388 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQ+VN ++AVR+ HIPTG+ V+C +ERSQ NK +A L+AKL + ++R Sbjct: 389 GKGGQNVNKVETAVRMVHIPTGIAVRCAEERSQLANKIKALRRLKAKLLVIAEEQRASEI 448 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG+QIR+YV PY++VKD+RT E + S V+DG+LD F+KA L K Sbjct: 449 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTACETSDISGVMDGELDPFIKAYLQYK 506 >gi|255311271|ref|ZP_05353841.1| peptide chain release factor 2 [Chlamydia trachomatis 6276] gi|255317573|ref|ZP_05358819.1| peptide chain release factor 2 [Chlamydia trachomatis 6276s] gi|297748590|gb|ADI51136.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Chlamydia trachomatis D-EC] gi|297749470|gb|ADI52148.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Chlamydia trachomatis D-LC] Length = 334 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 156/326 (47%), Positives = 206/326 (63%), Gaps = 1/326 (0%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 + W +V+ A + L +S E+++++ LE D + + Sbjct: 2 EQQAVQDGFWDDVVRAGKISERIARLKQQLSEFNELKNKVSAIQFFLEDEESSKDLEMQK 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E + ++ + LLSGE D N +L ++AGAGGTES DW MLLRMY RWA Sbjct: 62 ELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRWAS 121 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 ++ E ++ DGE AGIK TL + G AYG+ K E GVHRLVRISP+DSN++RHTSF Sbjct: 122 SHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSF 181 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S+ V+P +DD IE+EI D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ E Sbjct: 182 ASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNE 241 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQ +N+ NMLRA++Y+ LQ+R E NI +K EI WG QIR+YV QPY +VKD+ Sbjct: 242 RSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDV 301 Query: 327 RTNIEKTSPSDVLDGD-LDDFMKATL 351 RT E + ++DG+ LD F+KA L Sbjct: 302 RTGYEVGNIQAMMDGELLDAFIKAYL 327 >gi|260102492|ref|ZP_05752729.1| peptide chain release factor RF2 [Lactobacillus helveticus DSM 20075] gi|260083697|gb|EEW67817.1| peptide chain release factor RF2 [Lactobacillus helveticus DSM 20075] Length = 332 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 150/324 (46%), Positives = 199/324 (61%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 W + A+ L+ + L ++Q D L LEL E D + QE Sbjct: 1 MMQTGFWDDQEGAQKLISDNNLLKEKRDSFLKLQQDYEDELTALELLRAEPDADLQQEVE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +L+ ++ + + LLSG+ DS++A LE+H GAGGTE+ DW ML RMY R+ + Sbjct: 61 TDLKDLQEAFHNYELDLLLSGKYDSHNALLEIHPGAGGTEAMDWGQMLFRMYQRYCDAAG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E + GEEAG+KS ++ I G NAYG LK E GVHRLV ISP+D+ RRHTSF+S+ Sbjct: 121 FKFEINDYEPGEEAGLKSVSVRISGNNAYGMLKSENGVHRLVIISPFDAAKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DDSI+I+I D RID YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ Sbjct: 181 EVIPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A N LRAKL+ LE +K+ + + + EIGWG QIRSYV PY +VKDLRT Sbjct: 241 LQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + V+DG L F+ + L Sbjct: 301 YETADVNGVMDGKLQPFIYSYLQW 324 >gi|304386835|ref|ZP_07369099.1| peptide chain release factor RF1 [Neisseria meningitidis ATCC 13091] gi|304339089|gb|EFM05179.1| peptide chain release factor RF1 [Neisseria meningitidis ATCC 13091] Length = 358 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 120/349 (34%), Positives = 175/349 (50%), Gaps = 8/349 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + RL + P ++ + L RE L + + + D Sbjct: 4 SILEKLQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAELTPVVEVFQNYRLAQSDLA 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E+ + + E + + Q L D + ++E+ AG GG E Sbjct: 64 DAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIRAGTGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY+R+AE+ +++ E + ++ E G K I G AY LK E G HR Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ V P D+ +IE++ +D RIDT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGDL + A +A + Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITNALIAEHQ 349 >gi|307941920|ref|ZP_07657273.1| peptide chain release factor 2 [Roseibium sp. TrichSKD4] gi|307774826|gb|EFO34034.1| peptide chain release factor 2 [Roseibium sp. TrichSKD4] Length = 322 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 223/309 (72%), Positives = 259/309 (83%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD+ I+ +K ++ L DN+ L+EL E D S++++ D L+ +K +V Q + Sbjct: 1 MRERQQLDDGINGVKGLEQDLADNMELIELGELEGDQSVIKDAEDALRGLKDKVNELQLQ 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD ND YLE+++GAGGTESQDWA+MLLRMY RWAEKR FK E LE HDGEEAGI Sbjct: 61 SLLSGEADGNDTYLEINSGAGGTESQDWASMLLRMYRRWAEKRGFKVELLEYHDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLLIKG NAYGW+K E GVHRLVRISPYDSN+RRHTSFSS WVYPV+DDSIEIE++E Sbjct: 121 KSATLLIKGENAYGWMKTESGVHRLVRISPYDSNARRHTSFSSAWVYPVIDDSIEIEVNE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYRASGAGGQHVNTTDSAVRITH PTG+VVQCQ ERSQHKN+A AW+ML+A+LY Sbjct: 181 SDCRIDTYRASGAGGQHVNTTDSAVRITHQPTGIVVQCQSERSQHKNRATAWSMLKARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE AN + KT+IGWG QIRSYVLQPYQ+VKDLRT +E TSP DVLDG LD Sbjct: 241 EQELKKREEAANAEAAGKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTSPGDVLDGALDP 300 Query: 346 FMKATLAIK 354 FM+A LA + Sbjct: 301 FMEAALAQR 309 >gi|291442144|ref|ZP_06581534.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672] gi|291345039|gb|EFE71995.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672] Length = 375 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 141/354 (39%), Positives = 206/354 (58%), Gaps = 6/354 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS + + + D D ++ L + P LW N EA+ + HL + + + Sbjct: 13 LSSTMESIEAVLDLDRMRADIAVLEEQAAAPSLWDNPDEAQKITSRLSHLQAEVRKAEAL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +L E+A EEDD E L ++ ++ + +LLSGE D+ +A + + Sbjct: 73 RGRIDDLAVLFEMAEEEDDPDTRAEAEAELADVRKALDEMEVRTLLSGEYDAREALVNIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 A AGG ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+ S ++I ESD R+D YR+SG + Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQSDHVDIDESDLRVDVYRSSGPSC-N 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +D VRITH+PTG++ ERS+ +NK A N+L+A+L ++R+E ++ Sbjct: 252 PRDSDFMVRITHLPTGIMASSDSERSRTRNKVTAMNVLKARLLG---RRRQEEQAKMDAL 308 Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K E G G Q+RSY L PYQMVKDLRT E +P V +G++D F++A + + Sbjct: 309 KDEGGNPCGNQVRSYELHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWR 362 >gi|167761288|ref|ZP_02433415.1| hypothetical protein CLOSCI_03693 [Clostridium scindens ATCC 35704] gi|167660954|gb|EDS05084.1| hypothetical protein CLOSCI_03693 [Clostridium scindens ATCC 35704] Length = 312 Score = 238 bits (608), Expect = 7e-61, Method: Composition-based stats. Identities = 153/308 (49%), Positives = 216/308 (70%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+E +HL + I+ + D +L+E+ E++D S+ +E + ++ + E + + Sbjct: 1 MKELKHLKELVETIQNLYASYDDINLLIEMGYEDEDPSMAREIEEEIRGFETSYEELRIQ 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGE D+ +A + +HAGAGGTES DWA+ML RMY+RWAE++ F + L+ DG+ AGI Sbjct: 61 TLLSGEYDACNAIVTIHAGAGGTESCDWASMLYRMYSRWAERKGFTIQVLDYLDGDIAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ T + G NAYG+LK E+GVHRLVRISP+++ +R TSF+S V P ++D I+IEI++ Sbjct: 121 KTVTFEVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFASCDVVPDIEDEIDIEIAD 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D +IDTYRASGAGGQHVN T SA+RITH+PTG+VVQCQ ERSQH NK +A ML+ KL Sbjct: 181 DDLKIDTYRASGAGGQHVNKTSSAIRITHLPTGIVVQCQNERSQHHNKEKAMQMLKVKLQ 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ++ Q++ E + EIG+G QIRSYV+QPY MVKD RTN+E ++ V+DG +D Sbjct: 241 LMKEQEQAEKVSDIRGEVKEIGFGNQIRSYVMQPYTMVKDHRTNVENSNVGAVMDGSIDM 300 Query: 346 FMKATLAI 353 F+ A L Sbjct: 301 FINAYLKQ 308 >gi|332184657|gb|AEE26911.1| Peptide chain release factor 1 [Francisella cf. novicida 3523] Length = 361 Score = 238 bits (608), Expect = 8e-61, Method: Composition-based stats. Identities = 115/346 (33%), Positives = 186/346 (53%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R ++ + + + + + L +E HL+ + KE L D E+ Sbjct: 9 LQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALEDKQAAYEM 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + + + I+ Q L D + +LE+ AG GG E+ Sbjct: 69 LNEKDAELVEMAKEELKLANETIEKLESELQILLLPRDPNDDANVFLEIRAGTGGDEASI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L +MY+++AE+R +K E + +GE G K I G Y LK E G HR+ R Sbjct: 129 FSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ I+I+ +D ++DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++ ++ K+ +G G Sbjct: 249 THIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQ--SDTRKSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +V++G LD ++ + + Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQ 351 >gi|30692908|ref|NP_851096.1| HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109); translation release factor/ translation release factor, codon specific [Arabidopsis thaliana] gi|8777302|dbj|BAA96892.1| translation releasing factor RF-2 [Arabidopsis thaliana] gi|15810391|gb|AAL07083.1| putative translation releasing factor RF-2 [Arabidopsis thaliana] gi|21436317|gb|AAM51328.1| putative translation releasing factor RF-2 [Arabidopsis thaliana] gi|21536944|gb|AAM61285.1| translation releasing factor RF-2 [Arabidopsis thaliana] gi|332006668|gb|AED94051.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana] Length = 456 Score = 238 bits (608), Expect = 8e-61, Method: Composition-based stats. Identities = 139/358 (38%), Positives = 212/358 (59%), Gaps = 4/358 (1%) Query: 1 MKLSR-QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59 ++++ ++ + + Q ++ L +K D W + +A+ + L + + + Sbjct: 88 VEIASARVEEIRASANLQQLEQEITNLESKATDTSFWDDRTKAQETLSSLNDLKDRMRLL 147 Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSNDA 117 E + + D +++L E D + + ++ + LLSG D A Sbjct: 148 SEFKTMVEDAETIVKLTEEMDSTDVSLLEEAMGIIKELNKSLDKFELTQLLSGPYDKEGA 207 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 + + AGAGGT++QDWA+MLLRMY RW EK+++KT+ +E+ +GEEAGIKSATL I+G A Sbjct: 208 VVYITAGAGGTDAQDWADMLLRMYMRWGEKQRYKTKVVEMSNGEEAGIKSATLEIEGRYA 267 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRAS 236 YG++ GE+G HR+VR SP++S R TSFS + V P+ ++++ IEI E D I RA Sbjct: 268 YGYISGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAG 327 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQ+VN ++AVRITHIPTGV V+C +ERSQ NK +A L+AKL + ++R Sbjct: 328 GKGGQNVNKVETAVRITHIPTGVAVRCTEERSQLANKTRALIRLKAKLMVIAEEQRATEI 387 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG+QIR+YV PY++VKD+RT E + + V+DGDLD F+KA L K Sbjct: 388 KEIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDITSVMDGDLDPFIKAYLKHK 445 >gi|238754561|ref|ZP_04615915.1| Peptide chain release factor 2 [Yersinia ruckeri ATCC 29473] gi|238707192|gb|EEP99555.1| Peptide chain release factor 2 [Yersinia ruckeri ATCC 29473] Length = 310 Score = 238 bits (608), Expect = 8e-61, Method: Composition-based stats. Identities = 172/308 (55%), Positives = 218/308 (70%), Gaps = 1/308 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 +ER L+ ++ I E+ L D LLELA+E DD E L+ + ++ +F Sbjct: 2 GKERSSLEEIVTTIDELAQGLEDVSGLLELAIEADDEETFDEAVAELEILDGKLGQLEFR 61 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 + SGE DS + YL++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E DG+ AG+ Sbjct: 62 RMFSGEYDSANCYLDLQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGDVAGL 121 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G A+GWL+ E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ Sbjct: 122 KSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINP 181 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLY Sbjct: 182 ADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLY 241 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E E+QK+ + E +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD Sbjct: 242 EFEMQKKNADKQMLEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDK 300 Query: 346 FMKATLAI 353 F++A+L Sbjct: 301 FIEASLKA 308 >gi|256372525|ref|YP_003110349.1| peptide chain release factor 2 [Acidimicrobium ferrooxidans DSM 10331] gi|256009109|gb|ACU54676.1| peptide chain release factor 2 [Acidimicrobium ferrooxidans DSM 10331] Length = 369 Score = 238 bits (608), Expect = 8e-61, Method: Composition-based stats. Identities = 157/353 (44%), Positives = 226/353 (64%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ +L D+ L+ L DP +W + + + L R L + + I + Sbjct: 13 LAERLERARAFLHIDDRRTELAELEAALADPGVWSDPAKGRELSRRYGTLKDDVELIARL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D+ + +E+ +DD + E D L + ++ + SLL+GE D +DA LE+H Sbjct: 73 DAMLADSNVAIEM--ADDDPDLAAEAEDVLTSLAAHLDAIEIRSLLAGEFDESDAVLEIH 130 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGT++QDWA M+LRMY RWA+ R F+ E E+ +G+EAGI SAT +++G AYG L Sbjct: 131 SGAGGTDAQDWAQMMLRMYERWAQGRGFEFEVDEVTEGQEAGILSATAIVRGRYAYGLLV 190 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+D+ RR TSF+S+ V P+ +D+ E+ I E D RIDTYR+SGAGGQH Sbjct: 191 AERGVHRLVRISPFDAQHRRQTSFASLDVTPLAEDAGEVVIDEKDLRIDTYRSSGAGGQH 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSAVRITH+PTG+VV CQ ERSQ +N+A+A +L +KL + +++ + Sbjct: 251 VNVTDSAVRITHLPTGIVVSCQNERSQLQNRAKAMQILVSKLEQRRREEQRAQLDALSGP 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + ++GW Q+RSYVL PYQ+VKD R+ E + VLDG LD F++A LA ++ Sbjct: 311 RVDVGWANQVRSYVLAPYQLVKDHRSGYEDRNVQAVLDGRLDPFIEAFLAWRR 363 >gi|208779474|ref|ZP_03246819.1| peptide chain release factor 1 [Francisella novicida FTG] gi|208744435|gb|EDZ90734.1| peptide chain release factor 1 [Francisella novicida FTG] Length = 361 Score = 238 bits (608), Expect = 8e-61, Method: Composition-based stats. Identities = 115/346 (33%), Positives = 186/346 (53%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R ++ + + + + + L +E HL+ + KE L D E+ Sbjct: 9 LQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALEDKQAAYEM 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + + + I+ Q L D + +LE+ AG GG E+ Sbjct: 69 LNEKDAELVEMAKEELKLANEAIEKLESELQILLLPRDPNDDANVFLEIRAGTGGDEASI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L +MY+++AE+R +K E + +GE G K I G Y LK E G HR+ R Sbjct: 129 FSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ I+I+ +D ++DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++ ++ K+ +G G Sbjct: 249 THIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQ--SDTRKSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +V++G LD ++ + + Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQ 351 >gi|16273461|ref|NP_439710.1| peptide chain release factor 1 [Haemophilus influenzae Rd KW20] gi|145631803|ref|ZP_01787563.1| peptide chain release factor 1 [Haemophilus influenzae R3021] gi|145637543|ref|ZP_01793200.1| peptide chain release factor 1 [Haemophilus influenzae PittHH] gi|145642039|ref|ZP_01797610.1| peptide chain release factor 1 [Haemophilus influenzae R3021] gi|148826083|ref|YP_001290836.1| peptide chain release factor 1 [Haemophilus influenzae PittEE] gi|229844233|ref|ZP_04464374.1| peptide chain release factor 1 [Haemophilus influenzae 6P18H1] gi|229847123|ref|ZP_04467228.1| peptide chain release factor 1 [Haemophilus influenzae 7P49H1] gi|260580342|ref|ZP_05848171.1| peptide chain release factor 1 [Haemophilus influenzae RdAW] gi|260583304|ref|ZP_05851079.1| peptide chain release factor 1 [Haemophilus influenzae NT127] gi|319897179|ref|YP_004135374.1| peptide chain release factor rf-1 [Haemophilus influenzae F3031] gi|1574404|gb|AAC23209.1| peptide chain release factor 1 (prfA) [Haemophilus influenzae Rd KW20] gi|144982593|gb|EDJ90143.1| peptide chain release factor 1 [Haemophilus influenzae R3021] gi|145269229|gb|EDK09175.1| peptide chain release factor 1 [Haemophilus influenzae PittHH] gi|145273219|gb|EDK13094.1| peptide chain release factor 1 [Haemophilus influenzae 22.4-21] gi|148716243|gb|ABQ98453.1| peptide chain release factor 1 [Haemophilus influenzae PittEE] gi|229809952|gb|EEP45673.1| peptide chain release factor 1 [Haemophilus influenzae 7P49H1] gi|229813227|gb|EEP48915.1| peptide chain release factor 1 [Haemophilus influenzae 6P18H1] gi|260093019|gb|EEW76953.1| peptide chain release factor 1 [Haemophilus influenzae RdAW] gi|260093664|gb|EEW77577.1| peptide chain release factor 1 [Haemophilus influenzae NT127] gi|301170298|emb|CBW29904.1| peptide chain release factor RF-1 [Haemophilus influenzae 10810] gi|317432683|emb|CBY81046.1| peptide chain release factor RF-1 [Haemophilus influenzae F3031] Length = 361 Score = 238 bits (608), Expect = 8e-61, Method: Composition-based stats. Identities = 111/344 (32%), Positives = 181/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R L D + + + + +E L+ + + L Sbjct: 10 LESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQNIEEAEIL 69 Query: 76 ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q + + I+ + Q L D + YLE+ AG GG E+ +A Sbjct: 70 LDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 129 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE ++++ E L ++ E+ G K + + G YG LK E G HR+ R+ Sbjct: 130 GDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVTGEGVYGQLKFESGGHRVQRVP 189 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 190 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 249 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++ + + +G G + Sbjct: 250 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQ--TDMRRNLLGSGDRSDK 307 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +V++G +D+ ++ + + Sbjct: 308 IRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQPIITEYQ 350 >gi|90022891|ref|YP_528718.1| peptide chain release factor 1 [Saccharophagus degradans 2-40] gi|119361599|sp|Q21FM3|RF1_SACD2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|89952491|gb|ABD82506.1| bacterial peptide chain release factor 1 (bRF-1) [Saccharophagus degradans 2-40] Length = 360 Score = 238 bits (607), Expect = 9e-61, Method: Composition-based stats. Identities = 115/346 (33%), Positives = 176/346 (50%), Gaps = 10/346 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + ++ +R + + DP + N + + L RE L+ I E L + Sbjct: 4 SILEKLEHLAERFTEVGALMGDPDVISNQDKFRDLGREYAELEPVIKCYNEYNTVLGNIA 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN---DAYLEVHAGAGG 127 L + D + + + L D N + +LE+ AG GG Sbjct: 64 EAKVLISDSDPDMRAMGQDELKENEAALEPLELELQKLLLPKDPNDGKNVFLEIRAGTGG 123 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ ++ L RMY+R+AE + +K E + + GE G K + G Y LK E G Sbjct: 124 DEAAIFSGDLFRMYSRYAESKGWKVEIISENQGEHGGYKEIITRVVGQGVYSELKFESGA 183 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P D+ E+ I+++D RIDT+RASGAGGQHVN TD Sbjct: 184 HRVQRVPETESQGRIHTSACTVAVMPEADEMAEVNINKADLRIDTFRASGAGGQHVNKTD 243 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SA+R+THIPTGVVV+CQ ERSQHKN+A+A ++L ++L + +K A + K+ +G Sbjct: 244 SAIRLTHIPTGVVVECQDERSQHKNRAKAMSLLASRLSMAQEEK--AAAEQASARKSLVG 301 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G +IR+Y P V D R N+ +V+ G L D ++ Sbjct: 302 SGDRSERIRTYNF-PQGRVTDHRINLTLYKLDEVMQGALGDVIQPL 346 >gi|332285704|ref|YP_004417615.1| peptide chain release factor 1 [Pusillimonas sp. T7-7] gi|330429657|gb|AEC20991.1| peptide chain release factor 1 [Pusillimonas sp. T7-7] Length = 355 Score = 238 bits (607), Expect = 9e-61, Method: Composition-based stats. Identities = 119/344 (34%), Positives = 178/344 (51%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + RL ++ +P + ++ + + RER LD ++ D E+ Sbjct: 5 LEQLAHRLIEVDALLAEPEIAGDMDRYRKISRERAELDPVVAVFNSFLATEGDIKTAQEM 64 Query: 76 ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + +E + + Q L DS YLE+ AG GG ES +A Sbjct: 65 MADPDMRGMAEEELMLGKEKLEQLEADLQVLLLPRDPDDSRSVYLEIRAGTGGDESALFA 124 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE ++ E + D E G K + G YG LK E G HR+ R+ Sbjct: 125 GDLLRMYTRYAENNSWRVELVSASDSEIGGYKEVIARVDGDGVYGRLKFESGAHRVQRVP 184 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ +I I+ +D RIDT+RASGAGGQH+N TDSAVR+TH Sbjct: 185 ATETQGRIHTSACTVAVLPEADEQSDIVINPADLRIDTFRASGAGGQHINKTDSAVRVTH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQH+NK +A +L A+L + Q++E+ K+ +G G + Sbjct: 245 LPTGLVVECQDDRSQHRNKDKALQVLAARLKDK--QQQEQHDKEAAQRKSLVGTGDRSER 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ ++DGDL++ A LA + Sbjct: 303 IRTYNY-PQGRVTDHRINLTLYKLGHIMDGDLNELTNALLAEHQ 345 >gi|148826783|ref|YP_001291536.1| peptide chain release factor 1 [Haemophilus influenzae PittGG] gi|148718025|gb|ABQ99152.1| peptide chain release factor 1 [Haemophilus influenzae PittGG] Length = 361 Score = 238 bits (607), Expect = 9e-61, Method: Composition-based stats. Identities = 111/344 (32%), Positives = 181/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R L D + + + + +E L+ + + L Sbjct: 10 LESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQNIEEAEIL 69 Query: 76 ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q + + I+ + Q L D + YLE+ AG GG E+ +A Sbjct: 70 LDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 129 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE ++++ E L ++ E+ G K + + G YG LK E G HR+ R+ Sbjct: 130 GDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGEGVYGQLKFESGGHRVQRVP 189 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 190 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 249 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++ + + +G G + Sbjct: 250 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQ--TDMRRNLLGSGDRSDK 307 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +V++G +D+ ++ + + Sbjct: 308 IRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQPIITEYQ 350 >gi|300722130|ref|YP_003711413.1| peptide chain release factor RF-2 [Xenorhabdus nematophila ATCC 19061] gi|297628630|emb|CBJ89208.1| peptide chain release factor RF-2 [Xenorhabdus nematophila ATCC 19061] Length = 310 Score = 238 bits (607), Expect = 9e-61, Method: Composition-based stats. Identities = 171/308 (55%), Positives = 220/308 (71%), Gaps = 1/308 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 +ER L++ + I ++ L D LLELA+E DD E L +++ ++ +F Sbjct: 2 GKERSSLESIVETIDQLDQGLEDVNGLLELAVEADDEETFNEAVAELDQLEEKLGLLEFR 61 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 + SGE DS + YL++ AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E DG+ AG+ Sbjct: 62 RMFSGEYDSANCYLDLQAGSGGTEAQDWASMLMRMYLRWAESKGFKTEIIEESDGDVAGL 121 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSFSS ++YP VDD I+IEI+ Sbjct: 122 KSATIKIIGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINP 181 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID YRASGAGGQHVN T+SAVRITH+PTG+V QCQ +RSQHKNK QA L+AKLY Sbjct: 182 ADLRIDVYRASGAGGQHVNKTESAVRITHMPTGIVTQCQTDRSQHKNKDQAMKQLKAKLY 241 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ELE+QK+ E +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD Sbjct: 242 ELEMQKKNADKQAMEENKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQSVLDGDLDK 300 Query: 346 FMKATLAI 353 F++A+L Sbjct: 301 FIEASLKA 308 >gi|332678840|gb|AEE87969.1| Peptide chain release factor 1 [Francisella cf. novicida Fx1] Length = 361 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 115/346 (33%), Positives = 186/346 (53%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R ++ + + + + + L +E HL+ + KE L D E+ Sbjct: 9 LQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALEDKQTAYEM 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + + + I+ Q L D + +LE+ AG GG E+ Sbjct: 69 LNEKDAELVEMAKEELKLANEAIEKLESELQILLLPRDPNDDANVFLEIRAGTGGDEASI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L +MY+++AE+R +K E + +GE G K I G Y LK E G HR+ R Sbjct: 129 FSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ I+I+ +D ++DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++ ++ K+ +G G Sbjct: 249 THIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQ--SDTRKSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +V++G LD ++ + + Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQ 351 >gi|118498113|ref|YP_899163.1| peptide chain release factor 1 [Francisella tularensis subsp. novicida U112] gi|194323340|ref|ZP_03057124.1| peptide chain release factor 1 [Francisella tularensis subsp. novicida FTE] gi|166223559|sp|A0Q844|RF1_FRATN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|118424019|gb|ABK90409.1| protein chain release factor A [Francisella novicida U112] gi|194322704|gb|EDX20184.1| peptide chain release factor 1 [Francisella tularensis subsp. novicida FTE] Length = 361 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 115/346 (33%), Positives = 185/346 (53%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R ++ + + + + + L +E HL+ + KE L D E+ Sbjct: 9 LQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALEDKQAAYEM 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + + + I+ Q L D + +LE+ AG GG E+ Sbjct: 69 LNEKDAELVEMAKEELKLANEAIEKLESELQILLLPRDPNDDANVFLEIRAGTGGDEASI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L +MY+++AE+R +K E + +GE G K I G Y LK E G HR+ R Sbjct: 129 FSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ I+I+ +D ++DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTGVVV+CQ +RSQHKN+A A ML++KL + E+ K+++ ++ K+ +G G Sbjct: 249 THIPTGVVVECQDQRSQHKNRAAAMLMLKSKLLQAEIDKQQKEQ--SDTRKSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +V++G LD ++ + + Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQ 351 >gi|30692913|ref|NP_851097.1| HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109); translation release factor/ translation release factor, codon specific [Arabidopsis thaliana] gi|13568392|emb|CAC36322.1| translation releasing factor2 [Arabidopsis thaliana] gi|332006670|gb|AED94053.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana] Length = 455 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 139/358 (38%), Positives = 212/358 (59%), Gaps = 4/358 (1%) Query: 1 MKLSR-QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59 ++++ ++ + + Q ++ L +K D W + +A+ + L + + + Sbjct: 87 VEIASARVEEIRASANLQQLEQEITNLESKATDTSFWDDRTKAQETLSSLNDLKDRMRLL 146 Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSNDA 117 E + + D +++L E D + + ++ + LLSG D A Sbjct: 147 SEFKTMVEDAETIVKLTEEMDSTDVSLLEEAMGIIKELNKSLDKFELTQLLSGPYDKEGA 206 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 + + AGAGGT++QDWA+MLLRMY RW EK+++KT+ +E+ +GEEAGIKSATL I+G A Sbjct: 207 VVYITAGAGGTDAQDWADMLLRMYMRWGEKQRYKTKVVEMSNGEEAGIKSATLEIEGRYA 266 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRAS 236 YG++ GE+G HR+VR SP++S R TSFS + V P+ ++++ IEI E D I RA Sbjct: 267 YGYISGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAG 326 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQ+VN ++AVRITHIPTGV V+C +ERSQ NK +A L+AKL + ++R Sbjct: 327 GKGGQNVNKVETAVRITHIPTGVAVRCTEERSQLANKTRALIRLKAKLMVIAEEQRATEI 386 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG+QIR+YV PY++VKD+RT E + + V+DGDLD F+KA L K Sbjct: 387 KEIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDITSVMDGDLDPFIKAYLKHK 444 >gi|218461792|ref|ZP_03501883.1| peptide chain release factor 2 [Rhizobium etli Kim 5] Length = 320 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 227/309 (73%), Positives = 271/309 (87%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD+ I+ +K+++ +L DN+ L+EL EE D S+++E D L+ +K E +Q E Sbjct: 1 MRERQQLDDGINGVKQLEQQLNDNIELIELGEEEGDQSVVKEAEDTLKALKAEAARRQVE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWAE+++FK E LE+HDGEEAGI Sbjct: 61 AMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSSIWVYPVVDDSI+IEI+E Sbjct: 121 KSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSIQIEINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VVQCQQERSQHKN+A+AW+MLRA++Y Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDMLRARMY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KRE+ AN +SKT+IGWG QIRSYVLQPYQ+VKDLRT + T+P DVLDGDL++ Sbjct: 241 EAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVASTAPDDVLDGDLNE 300 Query: 346 FMKATLAIK 354 FM+A LA + Sbjct: 301 FMEAALAHR 309 >gi|118475480|ref|YP_892510.1| peptide chain release factor 2 [Campylobacter fetus subsp. fetus 82-40] gi|166223624|sp|A0RQM7|RF2_CAMFF RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|118414706|gb|ABK83126.1| peptide chain release factor 2 [Campylobacter fetus subsp. fetus 82-40] Length = 369 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 168/354 (47%), Positives = 230/354 (64%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL+ ++ + + + RL + P W ++ +A + +E+ + N + K Sbjct: 12 KLNTKVQNISRVIKPQDIEIRLKEIEDIENRPEFWNDIKKASEIGKEKTKISNMLCKFKN 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ + D L ELA EDD + ++ Q ++ ++ + +LSGE DS +A + + Sbjct: 72 VKSAISDAYELYELANAEDDEQTINSLFEDAQNLENKITNLEISMMLSGEDDSKNAIVSI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTES DWA+ML RMY R+ E+ FK E L+ +G+EAG+K + ++KG NAYG+L Sbjct: 132 HPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGDEAGLKDVSFIVKGENAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HRLVR SP+DS RRHTSFSS+ V P VDD I IEI E D R+D YRASGAGGQ Sbjct: 192 KAENGIHRLVRTSPFDSAGRRHTSFSSVMVSPEVDDDIAIEIEEKDLRLDYYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPTG+VVQCQ +RSQHKNKA A ML+++LYE EL K++E N E Sbjct: 252 HVNKTESAVRITHIPTGIVVQCQNDRSQHKNKATAMKMLKSRLYEFELMKQQEANNAIE- 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+EIGWG QIRSYVL PYQ VKD R+ + +LDGD+ +++ L +K Sbjct: 311 -KSEIGWGHQIRSYVLFPYQQVKDTRSGEAYSQTDAILDGDIKKIIESVLISQK 363 >gi|126665163|ref|ZP_01736146.1| peptide chain release factor 1 [Marinobacter sp. ELB17] gi|126630533|gb|EBA01148.1| peptide chain release factor 1 [Marinobacter sp. ELB17] Length = 364 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 121/348 (34%), Positives = 191/348 (54%), Gaps = 11/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R ++ D + N + + L RE ++ + + Q L D EL Sbjct: 9 LEQLVERFEEVSALLSDAGVIANQNKFRELSREYAEIEPVVQCFQAWQHSLVDINEAREL 68 Query: 76 ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + D + ++E ++ + Q L D + +LEV AG GG E+ Sbjct: 69 SKDGDADADMREMAEEELHTAQQASEELDAELQGLMLPKDPNDGKNVFLEVRAGTGGDEA 128 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY+R+AE+R+++ E L +GE G K + G YG LK E GVHR+ Sbjct: 129 AIFAGDLFRMYSRFAERRRWQVEILSASEGEHGGYKEVIARVAGSGVYGTLKFESGVHRV 188 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS ++ V P D++ +EI++ D R+DT+RASGAGGQHVN TDSA+ Sbjct: 189 QRVPETESQGRIHTSACTVAVMPEADEAEAVEINKGDLRVDTFRASGAGGQHVNKTDSAI 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+P+G+VV+CQ+ERSQHKN+A+A ++L ++L +E ++ ++ E+ K+ +G G Sbjct: 249 RITHLPSGLVVECQEERSQHKNRAKAMSLLASRLQNIETER--AHQSMAETRKSLVGSGD 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +V+ GDLD +K L + Sbjct: 307 RSERIRTYNF-PQSRVTDHRINLTLYKLDEVIAGDLDSVVKPLLQEHQ 353 >gi|37527422|ref|NP_930766.1| peptide chain release factor 2 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36786857|emb|CAE15922.1| Peptide chain release factor 2 (RF-2) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 310 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 173/308 (56%), Positives = 220/308 (71%), Gaps = 1/308 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 +ER L+ + I +++ L D LLELA+E DD E L++++ ++ +F Sbjct: 2 GKERSSLEEIVETIDQLEQGLEDVQGLLELAVEADDEETFNEAVVELEQLEEKLGQLEFR 61 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 + SGE DS D YL++ AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E DGE AG+ Sbjct: 62 RMFSGEYDSADCYLDLQAGSGGTEAQDWASMLMRMYLRWAESKGFKTEIIEESDGEVAGL 121 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSFSS ++YP VDD I+IEI+ Sbjct: 122 KSATIKIMGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINP 181 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLY Sbjct: 182 ADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLY 241 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ELE+QK+ E +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD Sbjct: 242 ELEMQKKNANKQEMEENKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQSVLDGDLDK 300 Query: 346 FMKATLAI 353 F++A+L Sbjct: 301 FIEASLKA 308 >gi|78776561|ref|YP_392876.1| peptide chain release factor 2 [Sulfurimonas denitrificans DSM 1251] gi|123550812|sp|Q30TP0|RF2_SULDN RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|78497101|gb|ABB43641.1| bacterial peptide chain release factor 2 (bRF-2) [Sulfurimonas denitrificans DSM 1251] Length = 365 Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats. Identities = 168/352 (47%), Positives = 239/352 (67%), Gaps = 2/352 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS++++ + G+ + D +R++ ++ W + A ++ +++ + + Sbjct: 13 LSKKMSNITGVVEPDKLYKRVAQIDELENSQDFWNDSSNAALVQKDKTQCERKLKKYNLA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ + D L E+A EE+D ++ E + Q I+ + + E LLS E D N+A L +H Sbjct: 73 KNAIDDAKELYEMAKEENDEDLIAECFNGAQHIEDLIRTMEIEVLLSEETDGNNAILSIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA++LLRMY R+AE+R + E L+ G+EAGIK +LLI G NAYG+LK Sbjct: 133 PGAGGTESQDWASILLRMYKRFAERRGWSVEVLDYQAGDEAGIKDVSLLISGENAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVRISP+DSN++RHTSFSS+ V P VDD I I I + D R+DTYR+SGAGGQH Sbjct: 193 VENGIHRLVRISPFDSNAKRHTSFSSVMVSPEVDDDINIVIEDRDIRVDTYRSSGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SA+RITHI TGVVVQCQ +RSQHKN+A A ML+++LYELEL+ ++ Sbjct: 253 VNKTESAIRITHIATGVVVQCQNDRSQHKNRATAMKMLKSRLYELELENQKAEIAGIA-- 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYV+QPYQ +KD R+NI ++ S +LDGD+D ++ L + Sbjct: 311 KSEIGWGHQIRSYVMQPYQQIKDTRSNIAYSNVSAILDGDIDKMIEDVLISQ 362 >gi|319776412|ref|YP_004138900.1| peptide chain release factor RF-1 [Haemophilus influenzae F3047] gi|329123576|ref|ZP_08252138.1| peptide chain release factor RF1 [Haemophilus aegyptius ATCC 11116] gi|317451003|emb|CBY87233.1| peptide chain release factor RF-1 [Haemophilus influenzae F3047] gi|327470318|gb|EGF15778.1| peptide chain release factor RF1 [Haemophilus aegyptius ATCC 11116] Length = 361 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 111/344 (32%), Positives = 181/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R L D + + + + +E L+ + + L Sbjct: 10 LESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQNIEEAEIL 69 Query: 76 ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q + + I+ + Q L D + YLE+ AG GG E+ +A Sbjct: 70 LDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 129 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE ++++ E L ++ E+ G K + + G YG LK E G HR+ R+ Sbjct: 130 GDLFRMYSRYAESKRWRVEMLSANESEQGGYKELIVKVTGEGVYGQLKFESGGHRVQRVP 189 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 190 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 249 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++ + + +G G + Sbjct: 250 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQ--TDMRRNLLGSGDRSDK 307 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +V++G +D+ ++ + + Sbjct: 308 IRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQPIITEYQ 350 >gi|254373464|ref|ZP_04988952.1| peptide chain release factor 1 [Francisella tularensis subsp. novicida GA99-3549] gi|151571190|gb|EDN36844.1| peptide chain release factor 1 [Francisella novicida GA99-3549] Length = 361 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 115/346 (33%), Positives = 186/346 (53%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R ++ + + + + + L +E HL+ + KE L D E+ Sbjct: 9 LQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALKDKQAAYEM 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + + + I+ Q L D + +LE+ AG GG E+ Sbjct: 69 LNEKDAELVEMAKEELKLANEAIEKLESELQILLLPRDPNDDANVFLEIRAGTGGDEASI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L +MY+++AE+R +K E + +GE G K I G Y LK E G HR+ R Sbjct: 129 FSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ I+I+ +D ++DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++ ++ K+ +G G Sbjct: 249 THIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQ--SDTRKSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +V++G LD ++ + + Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQ 351 >gi|333029659|ref|ZP_08457720.1| peptide chain release factor RF-2 [Bacteroides coprosuis DSM 18011] gi|332740256|gb|EGJ70738.1| peptide chain release factor RF-2 [Bacteroides coprosuis DSM 18011] Length = 370 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 132/358 (36%), Positives = 205/358 (57%), Gaps = 11/358 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L D D+ L +T+ P W + A+ M+ + +++ I + Sbjct: 10 IKERTLALRRYLDIDSKKIELEEEQLRTQAPDFWDDPKVAQSQMKLVKGIEDWIKGYENS 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + D+ +E + + +E + +++L EAD L+++ Sbjct: 70 VALTEELELAFDFYK--DELVSEEEVDAAYNKALVCIENLELKNMLRQEADQLGCILKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDWA+ML+R+Y RWAE +K + +G+EAGIK+ T+ ++G AYG+LK Sbjct: 128 SGAGGTESQDWASMLMRLYLRWAEDHNYKATLSNLQEGDEAGIKTCTIQVEGEYAYGYLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVR+SPY++ +R TSF+SI+V P+VD+SIE+ I S D +R+ GAGGQ+ Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASIFVTPLVDESIEVTIDPSAITWDLFRSGGAGGQN 247 Query: 243 VNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 VN ++ VR+ + ++V+ + RSQ N+ A +LR+ LYE ELQKR Sbjct: 248 VNKVETGVRLRYQYKDPDTGQEEEILVENTESRSQLDNRENAMRLLRSILYEKELQKRLA 307 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E SK +I WG QIRSYV + VKD RTN + + + V+DGD+D+F+KA L Sbjct: 308 ELRKIEDSKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGDIDEFIKAYLM 364 >gi|323142096|ref|ZP_08076944.1| peptide chain release factor 1 [Phascolarctobacterium sp. YIT 12067] gi|322413483|gb|EFY04354.1| peptide chain release factor 1 [Phascolarctobacterium sp. YIT 12067] Length = 355 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 116/351 (33%), Positives = 185/351 (52%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D R L K DP + + + L+ ++ +E +D + Sbjct: 1 MLDKLQALEDRYLDLEAKISDPEVIADQTNWLKATKAHAKLEPIVTAYREYRDMIKARDE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 EL DD +++ + L+ +K ++E + L S D + +E+ GAGG Sbjct: 61 AEELLAAGDDEELVEMAKEELKELKPQIEEYEEKLTILLLPSDPNDDKNVIVEIRGGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A +L RMY R+AE R ++ E ++ + E G K I G + Y +K E GV Sbjct: 121 DEAALFAGVLFRMYLRYAETRGWRVEVMDSNPTELGGFKEVVFQISGDSVYSRMKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P + +++EI+ +D R+DTYRA GAGGQ+VN T+ Sbjct: 181 HRVQRVPETESQGRVHTSTVTVAVLP-EAEEVDVEINPADLRVDTYRAGGAGGQYVNKTE 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTG+V QCQ E+SQ KN+ + +LRA++ LE + E+ A E K+++G Sbjct: 240 SAVRITHIPTGIVAQCQDEKSQLKNREKCMRVLRARI--LEQAQEEQRAATAEDRKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++GDLD+ + A + K+ Sbjct: 298 TGDRSERIRTYNY-PQGRVTDHRIGLTLHKLDSIVNGDLDELLGALITAKQ 347 >gi|261338116|ref|ZP_05966000.1| peptide chain release factor 2 [Bifidobacterium gallicum DSM 20093] gi|270276738|gb|EFA22592.1| peptide chain release factor 2 [Bifidobacterium gallicum DSM 20093] Length = 376 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 140/353 (39%), Positives = 207/353 (58%), Gaps = 1/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + D + + + L + +P LW + A+ + + + + + + Sbjct: 12 EARAKYEEIALALDVNRLQSQAAQLEQEAAEPGLWDDPEHAQKVTSKLSAVQSQLKHLAS 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 R+ D L+EL EE D L E ++ I ++ + ++L+ GE D A + + Sbjct: 72 AASRIDDVETLVELGREEADQDTLDEAQSEVESITNDLRDMEIQTLMDGEYDERSAVVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A MLLRMY RWAE+ +K + ++ EEAGIKSAT + P AYG L Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+D+ RR TSF+++ V P+V+ + IE+ ES+ R+DTY ASG GGQ Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIEVPESEIRVDTYCASGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTT SAVRITHIPTG+VV Q ERSQ +N+A A +L+++L L ++ + Sbjct: 252 GVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHEEEAKKKKELAG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E + V DGD+D F++A + + Sbjct: 312 D-IKASWGDQMRSYVLHPYQMVKDLRTGEETSQTQAVFDGDIDAFIQAGIRWR 363 >gi|188587462|ref|YP_001919007.1| peptide chain release factor 1 (bRF-1) [Natranaerobius thermophilus JW/NM-WN-LF] gi|229470350|sp|B2A3J0|RF1_NATTJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|179352149|gb|ACB86419.1| peptide chain release factor 1 (bRF-1) [Natranaerobius thermophilus JW/NM-WN-LF] Length = 357 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 117/352 (33%), Positives = 190/352 (53%), Gaps = 13/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + +R L DP + + + K +E L+ ++ ++ + + Sbjct: 1 MLDKLEGIEKRYQELEDLMSDPEVINDPEKLKQYSKEHASLEEIVNKYRQYLETKQEFEE 60 Query: 72 LLELALEEDDCSILQETSDN-----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 E+ E D+ ++E + +++ + + L D + +E+ AGAG Sbjct: 61 AKEMLEENDEDPDMEEFLKDEIPRLENQMQEIYDSLKILLLPKDPNDEKNVIVEIRAGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L RMYTR+AE +KTE ++ H+ + G K +I+G NAY LK E G Sbjct: 121 GDEAALFAADLYRMYTRYAEIMNWKTEIMDSHEKDMGGFKEIVFMIEGKNAYSRLKFESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S+ R HTS +++ V P + +EIEI ++ RIDT+ A+G GGQ VNTT Sbjct: 181 VHRVQRVPSTESSGRIHTSTATVAVLP-EAEDVEIEIDTNELRIDTFCATGPGGQSVNTT 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVRITH PTGVVV CQ E+SQHKN+ +A +LRA++Y++ L E+ E K+++ Sbjct: 240 QSAVRITHEPTGVVVSCQDEKSQHKNRDKAMKVLRARIYDMYL--EEQQQQEAEERKSQV 297 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P + D R N VL+G++D+ + A + ++ Sbjct: 298 GSGDRSERIRTYNF-PQGRITDHRINFTTHRLEQVLEGEIDELIDALITTEQ 348 >gi|167855820|ref|ZP_02478572.1| peptide chain release factor 1 [Haemophilus parasuis 29755] gi|219871001|ref|YP_002475376.1| peptide chain release factor 1 [Haemophilus parasuis SH0165] gi|254790883|sp|B8F526|RF1_HAEPS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|167853033|gb|EDS24295.1| peptide chain release factor 1 [Haemophilus parasuis 29755] gi|219691205|gb|ACL32428.1| peptide chain release factor 1 [Haemophilus parasuis SH0165] Length = 360 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 118/344 (34%), Positives = 184/344 (53%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ +R L D + + + +E L+ +S + D L Sbjct: 9 LDSLSERHEELQALLGDATIISDQEKFCAYSKEYSQLEEVVSTFNRWKKLHSDIEEAQIL 68 Query: 76 ALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D I +E N I+ + Q L D + +LE+ AG GG E+ +A Sbjct: 69 LDDPDMKEIAAEEIEANKAEIEQLEQNLQILLLPKDPNDEYNCFLEIRAGTGGDEAGIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE ++++ E L ++ E+ G K + I G YG LK E G HR+ R+ Sbjct: 129 GDLYRMYSRYAESKRWRIEELSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A +L +++ ++E +K+ + ++ + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKALAVLASRIVQVEKEKQAQEQ--ADTRRNLLGSGDRSDK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +V++G +D+ ++ + + Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 349 >gi|296435987|gb|ADH18161.1| peptide chain release factor 2 [Chlamydia trachomatis G/9768] gi|296437848|gb|ADH20009.1| peptide chain release factor 2 [Chlamydia trachomatis G/11074] gi|297140348|gb|ADH97106.1| peptide chain release factor 2 [Chlamydia trachomatis G/9301] Length = 334 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 154/326 (47%), Positives = 205/326 (62%), Gaps = 1/326 (0%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 + W +V+ A + L +S E+++++ LE D + + Sbjct: 2 EQQAVQDGFWDDVVRAGKISERIARLKQQLSEFNELKNKVSAIQFFLEDEESSKDLEMQK 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E + ++ + LLSGE D N +L ++AGAGGTES DW MLLRMY RWA Sbjct: 62 ELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRWAS 121 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 ++ E ++ DGE AGIK TL + G AYG+ K E GVHRLVRISP+DSN++RHTSF Sbjct: 122 SHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSF 181 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S+ V+P +DD IE+EI D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ E Sbjct: 182 ASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNE 241 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQ +N+ NML A++Y+ LQ+R E NI +K E+ WG QIR+YV QPY +VKD+ Sbjct: 242 RSQIQNREACMNMLCARIYQKLLQERLEKQNIDRKNKKEVSWGSQIRNYVFQPYTLVKDV 301 Query: 327 RTNIEKTSPSDVLDGD-LDDFMKATL 351 RT E + ++DG+ LD F+KA L Sbjct: 302 RTGYEVGNIQAMMDGELLDAFIKAYL 327 >gi|120555272|ref|YP_959623.1| peptide chain release factor 1 [Marinobacter aquaeolei VT8] gi|166223568|sp|A1U367|RF1_MARAV RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|120325121|gb|ABM19436.1| bacterial peptide chain release factor 1 (bRF-1) [Marinobacter aquaeolei VT8] Length = 363 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 122/338 (36%), Positives = 189/338 (55%), Gaps = 9/338 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R +N D + N + + L RE ++ + + + L D EL Sbjct: 9 LEQLVERFEEVNALLSDASVIANQDKFRDLSREFAEIEPVVKCFQAWRQSLEDIDAATEL 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 A + D + R + E Q L D+ + +LE+ AG GG E+ Sbjct: 69 AKDGDADMREMAEEELASARARSEELDEELQRLMLPKDPNDTKNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AEKR+++ E L ++GE G K + G YG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAEKRRWQVEVLSENEGEHGGFKEIIARLSGDGVYGTLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D++ +EI+++D R+DT+R+SGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRIHTSACTVAVMPEADEAEAVEINKADLRVDTFRSSGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ+ERSQHKN+A+A ++L ++L EL+K++ ++ E+ K+ +G G Sbjct: 249 THLPTGIVVECQEERSQHKNRAKALSLLASRLQNAELEKQQ--KSMAETRKSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +IR+Y P V D R N+ +V+ GDLD + Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYKLDEVIAGDLDAVV 343 >gi|45443320|ref|NP_994859.1| peptide chain release factor 2 [Yersinia pestis biovar Microtus str. 91001] gi|108806377|ref|YP_650293.1| peptide chain release factor 2 [Yersinia pestis Antiqua] gi|108813248|ref|YP_649015.1| peptide chain release factor 2 [Yersinia pestis Nepal516] gi|145597933|ref|YP_001162009.1| peptide chain release factor 2 [Yersinia pestis Pestoides F] gi|170023172|ref|YP_001719677.1| peptide chain release factor 2 [Yersinia pseudotuberculosis YPIII] gi|186896595|ref|YP_001873707.1| peptide chain release factor 2 [Yersinia pseudotuberculosis PB1/+] gi|270487483|ref|ZP_06204557.1| peptide chain release factor 2 [Yersinia pestis KIM D27] gi|294502944|ref|YP_003567006.1| peptide chain release factor RF-2 [Yersinia pestis Z176003] gi|21960210|gb|AAM86823.1|AE013928_8 peptide chain release factor RF-2 [Yersinia pestis KIM 10] gi|45438189|gb|AAS63736.1| peptide chain release factor RF-2 [Yersinia pestis biovar Microtus str. 91001] gi|108776896|gb|ABG19415.1| bacterial peptide chain release factor 2 (bRF-2) [Yersinia pestis Nepal516] gi|108778290|gb|ABG12348.1| bacterial peptide chain release factor 2 (bRF-2) [Yersinia pestis Antiqua] gi|145209629|gb|ABP39036.1| bacterial peptide chain release factor 2 (bRF-2) [Yersinia pestis Pestoides F] gi|169749706|gb|ACA67224.1| peptide chain release factor 2 [Yersinia pseudotuberculosis YPIII] gi|186699621|gb|ACC90250.1| peptide chain release factor 2 [Yersinia pseudotuberculosis PB1/+] gi|262360979|gb|ACY57700.1| peptide chain release factor RF-2 [Yersinia pestis D106004] gi|262364919|gb|ACY61476.1| peptide chain release factor RF-2 [Yersinia pestis D182038] gi|270335987|gb|EFA46764.1| peptide chain release factor 2 [Yersinia pestis KIM D27] gi|294353403|gb|ADE63744.1| peptide chain release factor RF-2 [Yersinia pestis Z176003] Length = 310 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 172/308 (55%), Positives = 219/308 (71%), Gaps = 1/308 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 +ER L+ ++ I +++ L D LLELA+E DD ET L+ + ++ +F Sbjct: 2 GKERSTLEEIVTTIDQLEQGLEDVSGLLELAVEADDEETFNETIAELEVLDGKLGQLEFR 61 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 + SGE D + YL++ AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E DG+ AG+ Sbjct: 62 RMFSGEYDRANCYLDLQAGSGGTEAQDWASMLLRMYLRWAESRGFKTEIIEESDGDVAGL 121 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G A+GWL+ E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ Sbjct: 122 KSATVKIIGEYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINP 181 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLY Sbjct: 182 ADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLY 241 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E E+QK+ + E +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD Sbjct: 242 EFEMQKKNADKQVLEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDK 300 Query: 346 FMKATLAI 353 F++A+L Sbjct: 301 FIEASLKA 308 >gi|152979102|ref|YP_001344731.1| peptide chain release factor 1 [Actinobacillus succinogenes 130Z] gi|150840825|gb|ABR74796.1| peptide chain release factor 1 [Actinobacillus succinogenes 130Z] Length = 374 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 116/344 (33%), Positives = 184/344 (53%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ +R L D + + + + +E L+ + + D L Sbjct: 23 LDSLAERHEELQALLGDASVINDQDKFRTYSKEYAQLEEVVGAFTRWKKLNQDIEDAQLL 82 Query: 76 ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + +E N I+ + Q L D +AYLE+ AG GG E+ +A Sbjct: 83 LNDPDMKDMAQEEIEQNKAEIEQLEQQLQILLLPKDPHDEYNAYLEIRAGTGGDEAGIFA 142 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE ++++ E L ++ E+ G K + + G YG LK E G HR+ R+ Sbjct: 143 GDLFRMYSRYAESKRWRIETLSANESEQGGYKEIIVKVIGEGVYGQLKFESGGHRVQRVP 202 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 203 KTESQGRIHTSACTVAVMPELPETELPEINPTDLRIDTYRSSGAGGQHVNTTDSAVRITH 262 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +K+ ++ + +G G + Sbjct: 263 IPTGIVVECQDERSQHKNKAKAMSVLASRIAQAEQEKQ--AREQADTRRNLLGSGDRSDK 320 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +V++G +D+ ++ + + Sbjct: 321 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 363 >gi|312879986|ref|ZP_07739786.1| bacterial peptide chain release factor 2 (bRF-2) [Aminomonas paucivorans DSM 12260] gi|310783277|gb|EFQ23675.1| bacterial peptide chain release factor 2 (bRF-2) [Aminomonas paucivorans DSM 12260] Length = 374 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 159/350 (45%), Positives = 215/350 (61%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L Q L D A R+ L + DP W +A+ RE L + + Sbjct: 13 LRSQACELRDSLDLPAAETRIEGLLKQAADPEFWT-REDAQETTRELAQLQQKRESWETL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L + L L E +D + +E + E+E +Q LL E D +DA + +H Sbjct: 72 NRELQEMETLAALLAEGEDVDLEEEFYRRAGAFEKELERRQIFVLLDEEYDRSDAIVTIH 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG +SQDW +L RMY RW EK FK+ L+ +EAGIKS T + G AYG+LK Sbjct: 132 AGAGGLDSQDWTEILSRMYLRWVEKEGFKSRILDQLADQEAGIKSITFEVLGDYAYGYLK 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE+GVHRLVRISP+D+ RRHTSF+S+ V PV+ + +IEI D ++DT+R+SGAGGQ+ Sbjct: 192 GEKGVHRLVRISPFDAAKRRHTSFASVEVLPVLPEDADIEIRPEDLKMDTFRSSGAGGQY 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSAVRITHIPTG++V CQ ERSQH N+A A +L++KL+E +LQ+R+E + Sbjct: 252 VNMTDSAVRITHIPTGIIVSCQVERSQHMNRATALQVLKSKLFERQLQERQEHLESLQGE 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K I WG QIRSY LQP+Q+VKD R+ E + + VLDGDL++ + +TL Sbjct: 312 KRSIAWGSQIRSYTLQPFQLVKDHRSGCEVGNVAAVLDGDLEELIMSTLR 361 >gi|62259280|gb|AAX77849.1| unknown protein [synthetic construct] Length = 360 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 166/327 (50%), Positives = 222/327 (67%), Gaps = 3/327 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L + ED +W N A+ L +++ L+N + + I + L LLEL E++ Sbjct: 25 LEMELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELGEEDESLMQE 84 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 ++ E +F + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA Sbjct: 85 IAKDTQNVASEI--EKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWA 142 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 + FK ++ DG+ AGIK TL I+G AYGWL+ E G+HRLVR SP+DSNS+RHTS Sbjct: 143 DSHGFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTS 202 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q Sbjct: 203 FASVFISPEVDDDIDIEINPTDLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQS 262 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 +RSQHKN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL +KD Sbjct: 263 DRSQHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIKD 321 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352 LRT +E T+ VLDGDLD F++A+L Sbjct: 322 LRTGVENTNTQAVLDGDLDKFIEASLK 348 >gi|293398675|ref|ZP_06642853.1| peptide chain release factor 1 [Neisseria gonorrhoeae F62] gi|291611146|gb|EFF40243.1| peptide chain release factor 1 [Neisseria gonorrhoeae F62] Length = 358 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 120/349 (34%), Positives = 175/349 (50%), Gaps = 8/349 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + RL + P ++ + L RE L + + + D Sbjct: 4 SILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQSDLA 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E+ + + E + + Q L D + ++E+ AG GG E Sbjct: 64 DAEEMLSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEIRAGTGGGE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY+R+AE+ +++ E + ++ E G K I G AY LK E G HR Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ V P D+ +IE++ +D RIDT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREVQAKEAAERKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGDL + A +A + Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQ 349 >gi|289577389|ref|YP_003476016.1| peptide chain release factor 1 [Thermoanaerobacter italicus Ab9] gi|289527102|gb|ADD01454.1| peptide chain release factor 1 [Thermoanaerobacter italicus Ab9] Length = 356 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 121/346 (34%), Positives = 193/346 (55%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72 R L+ K DP++ NV E + ++E ++ + +E + + D L Sbjct: 5 LQAIEDRYVELSQKISDPNIISNVGEWRKYVKEHAAIEEIVLKYREYKKVVEDINSTKEL 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L +E +E S ++ + +E + + D + +E+ AGAGG E+ Sbjct: 65 LSSDEKELREMAEEELSHLEEKKEELLEEIKILLIPKDPNDEKNVIMEIRAGAGGEEAAL 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A+ L RMY+ +AEK+ +K E + ++ + G K L I G AY LK E GVHR+ R Sbjct: 125 FAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGAYSRLKYESGVHRVQR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ V P + +++EI+ +D RID +R+ G GGQ VNTTDSAVR+ Sbjct: 185 VPTTEAGGRIHTSTATVAVLP-EVEEVDVEINPNDIRIDVFRSGGHGGQSVNTTDSAVRV 243 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV CQ ERSQ +N+ +A +LRAKLYE+ LQ++++ I E+ K+++G G Sbjct: 244 THIPTGIVVTCQDERSQLQNRERALKILRAKLYEMALQEQQKE--IAEARKSQVGTGERS 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +VLDGDLD+ + A + + Sbjct: 302 ERIRTYNF-PQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALILNDQ 346 >gi|325267755|ref|ZP_08134406.1| peptide chain release factor RF1 [Kingella denitrificans ATCC 33394] gi|324980879|gb|EGC16540.1| peptide chain release factor RF1 [Kingella denitrificans ATCC 33394] Length = 358 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 116/349 (33%), Positives = 180/349 (51%), Gaps = 8/349 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + D N RL + P ++ + L +E L + + D Sbjct: 4 SILDKLQNLAHRLEEVTALLGSPEATSDMDNYRRLNQEHAELTPIVETYRAYTQAESDLA 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTE 129 E+ + + E + + ++ + L D + ++E+ AG GG E Sbjct: 64 EAQEMLSDPEMKDFAAEEIEAAKAKIEMLDLALQKLLLPKDADDDKNIFIEIRAGTGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY+R+AE+ +++TE + ++ + G K + + G AY LK E G HR Sbjct: 124 AALFAGDLLRMYSRYAERNRWQTEIVSANESDLGGYKEVIVRLVGLGAYSKLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ V P D+ +IE+++ D RIDT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELAKIELNDKDLRIDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV+CQ RSQH NK +A +L A+L + +QKRE A K+ IG G Sbjct: 244 VRITHLPTGLVVECQDGRSQHTNKEKALKVLAARLND--MQKREAQAKEAAERKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGD+++ A +A + Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDMEEITAALMAEHQ 349 >gi|224827212|ref|ZP_03700307.1| peptide chain release factor 1 [Lutiella nitroferrum 2002] gi|224600605|gb|EEG06793.1| peptide chain release factor 1 [Lutiella nitroferrum 2002] Length = 358 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 111/344 (32%), Positives = 173/344 (50%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 RL + +++ + L RE L + + + D E+ Sbjct: 9 LSQLADRLEEVTHLLASEAATRDMDAFRKLTREHAELTPVVETYQAYRQCESDLATATEM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D Q D + Q L D + +LE+ AG GG E+ +A Sbjct: 69 LADPDMKEFAQAEIDEGKERMASLDVELQKLLLPKDPNDEKNIFLEIRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE+ +++ E + + + G K + + G A+ LK E G HR+ R+ Sbjct: 129 GDLLRMYTRFAERNRWQAEIVSSSESDLGGYKEVIVRLVGFGAFSRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P ++ E+ ++ +D RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 189 ATETQGRIHTSACTVAVMPEAEEIAEVVLNPADLRIDTFRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+V +CQ RSQH NKA A +L A++Y+++L R + ++ K+ IG G + Sbjct: 249 LPTGIVAECQDGRSQHANKASAMQVLAARIYDIQL--RAQQQSVAAERKSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ V+DGDL + A +A + Sbjct: 307 IRTYNY-PQGRITDHRINLTLYKLDQVMDGDLFELTDALIAEHQ 349 >gi|304389757|ref|ZP_07371716.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304326933|gb|EFL94172.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 376 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 130/357 (36%), Positives = 207/357 (57%), Gaps = 4/357 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL + + D + Q+++ L + P LW + A+ + + + +++ Sbjct: 13 KLRASFATISAVMDPELLTQKIADLTQQAAAPDLWDDQEHAQKVTQSLSAAQADLQRLQK 72 Query: 62 IQDRLCDNL---ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 ++ R+ D L ED +IL + + +K +++ + ++LL+GE D A Sbjct: 73 MRARIDDMEALVELGAEESGEDRDAILADAEQTYETLKQDLDAMEVKTLLNGEYDERFAV 132 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + + +GAGG ++ D+A MLLRMY R+ E+ + T+ L+ EEAGIKS T + P AY Sbjct: 133 VTIRSGAGGVDAADFAQMLLRMYLRYCERHHYATKVLDTSYAEEAGIKSVTFQVDAPYAY 192 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G L E G HRL R+SP+++ +R TSF+++ V P+++ + IE+ ESD +ID +R+SG Sbjct: 193 GMLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLIETTDHIEVPESDIKIDVFRSSGP 252 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTTDSAVR+TH+PTG+V+ Q E+SQ +N+A A +L+++L L Q+ + Sbjct: 253 GGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLMLRHQQEHDKKKE 312 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSY L Q+VKDLRT E +P V DGDLD F+ A + +K Sbjct: 313 LAGD-VKASWGDQMRSYFLYGQQLVKDLRTGYESGNPDSVFDGDLDGFIDAAIRWRK 368 >gi|241667853|ref|ZP_04755431.1| peptide chain release factor 1 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876395|ref|ZP_05249105.1| peptide chain release factor [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842416|gb|EET20830.1| peptide chain release factor [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 361 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 114/346 (32%), Positives = 184/346 (53%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R ++ + ++ + + + L +E HL+ + KE L D E+ Sbjct: 9 LQSLIERHEEVSALLGEANVISDQNKFRDLSKEYSHLEPIVKAFKEYTQALEDKEAAYEM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + + + Q L D + +LE+ AG GG E+ Sbjct: 69 LNEKDAELVEMAKEELKSANESIERLEDELQILLLPRDPNDDANIFLEIRAGTGGDEASI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L +MY+++AE+R +K E + +GE G K I G Y LK E G HR+ R Sbjct: 129 FSGDLFKMYSKYAEQRGWKIEVVSASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ I+I+ +D ++DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++ ++ K +G G Sbjct: 249 THIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQ--SDTRKNLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +V++G LD ++ + + Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLILEHQ 351 >gi|119952877|ref|YP_945086.1| peptide chain release factor 2 [Borrelia turicatae 91E135] gi|119861648|gb|AAX17416.1| bacterial peptide chain release factor 2 [Borrelia turicatae 91E135] Length = 353 Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats. Identities = 148/350 (42%), Positives = 221/350 (63%), Gaps = 4/350 (1%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 +L GG FD + +L + D + W + +A+ +++ + L I +++ Sbjct: 5 NKLKMSGGSFDSNKIKVKLKEYEKQINDENFWNDNKKAQEILKNQNILKAKIEPWEDLIC 64 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 +L D L E+A E+D ++L + + L+ + S + D N+A+L +H+G Sbjct: 65 KLKDLRELCEIAESEEDTALLDQDINKLREQYKHLLT---LSYFKEDIDINNAFLTIHSG 121 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGGTE+ DW +ML R+Y R++E+ +KTE +++ + E GIKS T+ IKG AYG+LK E Sbjct: 122 AGGTEACDWVSMLYRIYLRYSERHGYKTELIDLLEAE-GGIKSVTIEIKGEYAYGFLKSE 180 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G+HRLVRISP+D+ +RHTSF+S+++ PV+DD IEI I D R+DTYRASGAGGQHVN Sbjct: 181 VGIHRLVRISPFDAAKKRHTSFASVFIDPVIDDKIEITIKPEDIRVDTYRASGAGGQHVN 240 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T SAVRITH+ TG+V Q Q +RSQH+NK A +L++KLYE ++ + + K Sbjct: 241 KTSSAVRITHLQTGIVTQSQTDRSQHRNKDLAMRVLKSKLYEHYKILEQQKSKSKQEEKK 300 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +I WG QIRSY+ QPY +VKD RT E + V+DG++D+F++ L K Sbjct: 301 DISWGNQIRSYIFQPYTLVKDHRTKFENPNIISVMDGNIDNFIEEYLKWK 350 >gi|15602420|ref|NP_245492.1| peptide chain release factor 1 [Pasteurella multocida subsp. multocida str. Pm70] gi|13431785|sp|P57852|RF1_PASMU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|12720821|gb|AAK02639.1| PrfA [Pasteurella multocida subsp. multocida str. Pm70] Length = 360 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 114/344 (33%), Positives = 182/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL-LE 74 ++ +R L + + + + + +E L++ + + L Sbjct: 9 LESLKERHEELEALLGEASVISDQDKFRAYSKEYAQLEDVVKCFARWNQLNSNMEEAQLL 68 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 L +E I+ + Q L D + YLE+ AG GG E+ +A Sbjct: 69 LDDPSMKEMAQEEIEACKTEIEQVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE +++K E L ++ E+ G K + + G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESKRWKVEVLSANESEQGGYKEIIVKVNGEGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ SD RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 189 KTESQGRIHTSACTVAVMPELPESELPEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++E+ ++ + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEKERQEQAQ--ADTRRNLLGSGDRSDK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +V++G +D+ ++ + + Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 349 >gi|229542476|ref|ZP_04431536.1| peptide chain release factor 1 [Bacillus coagulans 36D1] gi|229326896|gb|EEN92571.1| peptide chain release factor 1 [Bacillus coagulans 36D1] Length = 356 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 109/351 (31%), Positives = 176/351 (50%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD R LN DP + + + + +E+ L + +E ++ Sbjct: 1 MFDRLQAVEDRYEKLNELLSDPEIVNDPKKLREYSKEQSDLQETVQVYREYKEVQKQLQD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 L E+ D + + + ++ ++ + L D + +E+ AGG Sbjct: 61 AKSLLSEKLDPEMKDMVKEEIHELESKIPEYEERLKILLLPKDPNDEKNVIVEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY R+AE + +K + +E + G K ++ G AY LK E G Sbjct: 121 DEAALFAGDLYRMYMRYAESQGWKIDVIEANVTGIGGYKEIVFMVNGKGAYSKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +E++I+E D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EAEEVEVDINEKDIRVDTFASSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+VV CQ E+SQ KNK +A +LRA++Y+ ++E A + K+ +G Sbjct: 240 SAVRLTHIPTGIVVSCQDEKSQIKNKEKAMKVLRARIYDKF--QQEAQAEYDANRKSAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + VLDG LD+ + A + + Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQVLDGKLDEIIDALILEDQ 347 >gi|90424348|ref|YP_532718.1| peptide chain release factor 2 [Rhodopseudomonas palustris BisB18] gi|90106362|gb|ABD88399.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodopseudomonas palustris BisB18] Length = 322 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 200/309 (64%), Positives = 250/309 (80%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L++++ I +++ L DN+ ++EL E+D ++ E L+ +K EV ++ E Sbjct: 1 MQERTSLEDSLGGIGKVERELTDNVDMIELGEAENDEGVVAEAEAALKALKKEVARRELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D+YLEVHAGAGGTESQDWA+MLLRMYTRWAEK FK E LE GEEAGI Sbjct: 61 ALLSGEADRFDSYLEVHAGAGGTESQDWASMLLRMYTRWAEKHGFKIEYLEETQGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PVVD++I+I+I+E Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVVDNTIKIDIAE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ RSQHKNKAQAW+MLRA+LY Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNKAQAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KREE A +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ + + VLDGDLD+ Sbjct: 241 EIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300 Query: 346 FMKATLAIK 354 FM ATLA + Sbjct: 301 FMGATLAQR 309 >gi|46446965|ref|YP_008330.1| peptide chain release factor RF-2 [Candidatus Protochlamydia amoebophila UWE25] gi|46400606|emb|CAF24055.1| probable peptide chain release factor RF-2 [Candidatus Protochlamydia amoebophila UWE25] Length = 326 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 150/323 (46%), Positives = 216/323 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 + W N +A++++ E + L +E++ + + LL A E ++ S ++E Sbjct: 1 MGESSFWNNSEQAQLIINECRDLRAWTVPYQELKTKFENCKELLPEAYELNEESFIEELL 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +L I+ + + + +LSGE D+ D YL +++GAGGTE+ DWA ML RMY RWA K+ Sbjct: 61 RDLDSIEKVLGDLEVQRMLSGEMDNKDCYLTINSGAGGTEACDWAQMLSRMYQRWAAKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K E ++ DG+ G+KS TL +G AYG+ K E+GVHRLVRISP+DSN++RHTSF+S+ Sbjct: 121 WKIEIIDFVDGDVVGLKSITLRFQGSYAYGYSKAEKGVHRLVRISPFDSNAKRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + I++EI D R+DT+R+SGAGGQHVN TDSAVR+TH+PTG+VV CQ +RSQ Sbjct: 181 DVSPEITTDIQVEIKPEDVRVDTFRSSGAGGQHVNKTDSAVRLTHMPTGIVVSCQTQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK + MLR+KLYE+E+ +RE+ N + K E WG QIR+YV QPY +VKD RT Sbjct: 241 VQNKEACYQMLRSKLYEMEVLEREKALNNLKGEKKENAWGSQIRNYVFQPYTLVKDTRTK 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352 E + V+DG+LD+F+ A L Sbjct: 301 AESGNIQAVMDGELDEFVNAYLK 323 >gi|33152002|ref|NP_873355.1| peptide chain release factor 1 [Haemophilus ducreyi 35000HP] gi|46576749|sp|Q7VMV9|RF1_HAEDU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|33148224|gb|AAP95744.1| peptide chain release factor 1 (RF-1) [Haemophilus ducreyi 35000HP] Length = 360 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 113/344 (32%), Positives = 183/344 (53%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +R L D + + + + +E L+ ++ + D L Sbjct: 9 LDCLSERHEELQALLGDASVIADQDKFRAYSKEYAQLEEVVATFNRWKKLNSDIEEAELL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + E + +E Q L D +A+LE+ AG GG E+ +A Sbjct: 69 LDDPDMKEMATEEITQNKAEIECLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE ++++ E + ++ E+ G K + I G + YG LK E G HR+ R+ Sbjct: 129 GDLYRMYSRYAESKRWRIEEMSANESEQGGYKEIIVKISGESVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 +PTG+VV+CQ ERSQHKNKA+A +L +++ ++E +++ ++ + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQ--AMAQADTRRNLLGTGDRSDK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +V++G +D+ ++ + + Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 349 >gi|314923649|gb|EFS87480.1| peptide chain release factor 2 [Propionibacterium acnes HL001PA1] gi|314967087|gb|EFT11186.1| peptide chain release factor 2 [Propionibacterium acnes HL082PA2] gi|315092708|gb|EFT64684.1| peptide chain release factor 2 [Propionibacterium acnes HL060PA1] gi|315103819|gb|EFT75795.1| peptide chain release factor 2 [Propionibacterium acnes HL050PA2] gi|327327221|gb|EGE68997.1| peptide chain release factor 2 [Propionibacterium acnes HL103PA1] Length = 371 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 153/353 (43%), Positives = 221/353 (62%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L+ + + D + ++ L + P+LW + A+ + L I ++ + Sbjct: 16 LDASLSSIENVLDPEAKKAEIADLEKQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +LLE A +DD L E + +++ E++ + +LLSG+ D +A + + Sbjct: 76 RARIEDVHVLLEFAAADDDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A MLLRMY RW+E+ +K E L+ EEAGIKSAT ++ P AYG L Sbjct: 136 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ ++I ESD R+D + ASG GGQ Sbjct: 196 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A +L+AKL E +++E N +S Sbjct: 256 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSE 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRTN E + V DGD+DDF+ A + ++ Sbjct: 316 GN--SWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 366 >gi|89256990|ref|YP_514352.1| peptide chain release factor 1 [Francisella tularensis subsp. holarctica LVS] gi|115315350|ref|YP_764073.1| peptide chain release factor 1 [Francisella tularensis subsp. holarctica OSU18] gi|134301375|ref|YP_001121343.1| peptide chain release factor 1 [Francisella tularensis subsp. tularensis WY96-3418] gi|156503190|ref|YP_001429255.1| peptide chain release factor 1 [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009371|ref|ZP_02274302.1| peptide chain release factor 1 [Francisella tularensis subsp. holarctica FSC200] gi|254368245|ref|ZP_04984265.1| peptide chain release factor 1 [Francisella tularensis subsp. holarctica 257] gi|290954490|ref|ZP_06559111.1| peptide chain release factor 1 [Francisella tularensis subsp. holarctica URFT1] gi|295312095|ref|ZP_06802908.1| peptide chain release factor 1 [Francisella tularensis subsp. holarctica URFT1] gi|119361542|sp|Q2A1Q0|RF1_FRATH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361543|sp|Q0BKE8|RF1_FRATO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223558|sp|A7NE96|RF1_FRATF RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223560|sp|A4IWC1|RF1_FRATW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|89144821|emb|CAJ80160.1| peptide chain release factor 1 [Francisella tularensis subsp. holarctica LVS] gi|115130249|gb|ABI83436.1| peptide chain release factor 1 [Francisella tularensis subsp. holarctica OSU18] gi|134049152|gb|ABO46223.1| peptide chain release factor 1 [Francisella tularensis subsp. tularensis WY96-3418] gi|134254055|gb|EBA53149.1| peptide chain release factor 1 [Francisella tularensis subsp. holarctica 257] gi|156253793|gb|ABU62299.1| peptide chain release factor 1 [Francisella tularensis subsp. holarctica FTNF002-00] Length = 361 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 115/346 (33%), Positives = 186/346 (53%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R ++ + + + + + L +E HL+ + KE L D E+ Sbjct: 9 LQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALEDKQAAYEM 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + + + I+ Q L D + +LE+ AG GG E+ Sbjct: 69 LNEKDAELVEMAKEELKLANEAIEKLESELQIFLLPRDPNDDANVFLEIRAGTGGDEASI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L +MY+++AE+R +K E + +GE G K I G Y LK E G HR+ R Sbjct: 129 FSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ I+I+ +D ++DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++ ++ K+ +G G Sbjct: 249 THIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQ--SDTRKSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +V++G LD ++ + + Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQ 351 >gi|254369840|ref|ZP_04985850.1| peptide chain release factor 1 [Francisella tularensis subsp. holarctica FSC022] gi|157122799|gb|EDO66928.1| peptide chain release factor 1 [Francisella tularensis subsp. holarctica FSC022] Length = 361 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 116/346 (33%), Positives = 186/346 (53%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R ++ + + + + + L +E HL+ + KE L D E+ Sbjct: 9 LQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALEDKQAAYEM 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + + + I+ Q L D + +LE+ AG GG E+ Sbjct: 69 LNEKDAELVEMAKEELKLANEAIEKLESELQIFLLPRDPNDDANVFLEIRAGTGGDEASI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L +MY+++AE+R +K E + +GE G K I G Y LK E G HR+ R Sbjct: 129 FSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 I +S R HTS ++ V P D+ I+I+ +D ++DT+RASGAGGQHVN TDSA+RI Sbjct: 189 IPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++ ++ K+ +G G Sbjct: 249 THIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQ--SDTRKSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +V++G LD ++ + + Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQ 351 >gi|93355984|gb|ABF10073.1| peptide chain release factor RF-1 [Cupriavidus metallidurans CH34] Length = 371 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 119/344 (34%), Positives = 176/344 (51%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +RL +N N+ + + L RE L + + D L Sbjct: 20 LDQLAERLDEVNALLAREDATANMDQYRKLSREHAELSPVAEQYGQYRQAQDDLATAQAL 79 Query: 76 ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + D + + Q L D + LE+ AG GG ES +A Sbjct: 80 LDDPEMKEFAADEIDAARERLQSLENSLQTLLLPKDPNDDRNLLLEIRAGTGGEESALFA 139 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE+R+++ E + + G K + I G A+ LK E G HR+ R+ Sbjct: 140 ADLLRMYTRYAERRRWQVEIMSESPSDLGGYKEVIVRIAGDAAFSRLKFESGGHRVQRVP 199 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P D+ E+EI+ SD R+DT+RASGAGGQHVN TDSAVR+TH Sbjct: 200 ATESQGRIHTSACTVAVMPEADEVGEVEINPSDLRVDTFRASGAGGQHVNKTDSAVRLTH 259 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQH+NK +A +L A++ +++L R A + + IG G + Sbjct: 260 LPTGIVVECQDDRSQHRNKEKAMKVLAARIKDMQL--RAAQAKEANTRRNLIGSGDRSDR 317 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ ++DGDLD+ + A A + Sbjct: 318 IRTYNF-PQGRVTDHRINLTLYKIDMIMDGDLDELISALSAEHQ 360 >gi|310829208|ref|YP_003961565.1| peptide chain release factor 2 [Eubacterium limosum KIST612] gi|308740942|gb|ADO38602.1| peptide chain release factor 2 [Eubacterium limosum KIST612] Length = 310 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 176/306 (57%), Positives = 223/306 (72%), Gaps = 3/306 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+E + L +++D L D L++ EL E ++ L +T + E+E + E Sbjct: 1 MKELKILRQKKGEYDKLKDNLDDILVMFELIDEGEEMDELPDTIEAFG---KELEKFKLE 57 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGE DSN+A + +H GAGGTESQDWA MLLRMYTRWAE++ FK ++L++ G+ AGI Sbjct: 58 TLLSGEYDSNNAIISLHPGAGGTESQDWAEMLLRMYTRWAERKGFKVKSLDLQPGDVAGI 117 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLLI+G NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S+ V P VDDS+EIEI+ Sbjct: 118 KSATLLIEGINAYGYLKTERGVHRLVRISPFDSSGRRHTSFASLDVTPEVDDSVEIEINP 177 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D R+DTYRASGAGGQHVN T SA+RITHIPTGVVVQCQ ERSQH+NK A NML+ KL Sbjct: 178 DDIRVDTYRASGAGGQHVNKTSSAIRITHIPTGVVVQCQNERSQHQNKEVAMNMLKGKLV 237 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+ Q+++E + ++I WG QIRSYV PY MVKD RTN+E + V+DGDLD Sbjct: 238 EIMEQEQKEKLDDVVGDYSQIAWGSQIRSYVFHPYNMVKDHRTNVEVGNIQSVMDGDLDQ 297 Query: 346 FMKATL 351 FM A L Sbjct: 298 FMNAYL 303 >gi|227874895|ref|ZP_03993048.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35243] gi|306818191|ref|ZP_07451922.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35239] gi|307701756|ref|ZP_07638770.1| peptide chain release factor 2 [Mobiluncus mulieris FB024-16] gi|227844670|gb|EEJ54826.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35243] gi|304649155|gb|EFM46449.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35239] gi|307613014|gb|EFN92269.1| peptide chain release factor 2 [Mobiluncus mulieris FB024-16] Length = 378 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 129/362 (35%), Positives = 206/362 (56%), Gaps = 9/362 (2%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL + + + D ++++ L + P LW + A+ + + + + ++ Sbjct: 12 KLQATFDTVEAVMDPALLQKKIADLTAQASAPDLWDDQENAQKITQTLSATQSDLERLQT 71 Query: 62 IQDRLCDN--------LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113 ++ RL D L+ D +I+++ + + ++ + +LL+GE D Sbjct: 72 MKTRLEDFAALVELGGEELMSEDGRADGQAIMEDAEATYKTLAADLAALEVRTLLNGEYD 131 Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 A + + +GAGG ++ D+A MLLRMY RWAE+ + T+ ++ EEAGIKSAT I Sbjct: 132 ERFAVVTIRSGAGGVDAADFAQMLLRMYLRWAERHGYPTKVMDTSYAEEAGIKSATFEID 191 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 P AYG L E G HRL R+SP+++ +R TSF+++ V P+++ + I++ ESD +ID + Sbjct: 192 APYAYGRLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLIETTDHIDVPESDIKIDVF 251 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 R+SG GGQ VNTTDSAVR+TH+PTG+V+ Q E+SQ +N+A A +L+++L L Q+ Sbjct: 252 RSSGPGGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLLLRHQQEH 311 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 E + WG Q+RSY L Q+VKDLRT E +P V DGDLD F+ + Sbjct: 312 EKKKELAGD-VKASWGDQMRSYFLYGQQLVKDLRTGHESNNPDAVFDGDLDAFIDEGIRW 370 Query: 354 KK 355 +K Sbjct: 371 RK 372 >gi|253988706|ref|YP_003040062.1| peptide chain release factor 2 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211637969|emb|CAR66597.1| peptide chain release factor 2 (rf-2) [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780156|emb|CAQ83317.1| peptide chain release factor 2 (rf-2) [Photorhabdus asymbiotica] Length = 310 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 172/308 (55%), Positives = 220/308 (71%), Gaps = 1/308 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 +ER L+ + I +++ L D LLELA+E DD E L++++ ++ +F Sbjct: 2 GKERSSLEEIVETIDQLEQGLEDVQGLLELAVEADDEETFHEAVAELEQLEGKLGQLEFR 61 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 + SGE DS + YL++ AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E DGE AG+ Sbjct: 62 RMFSGEYDSANCYLDLQAGSGGTEAQDWASMLMRMYLRWAESKGFKTEIIEESDGEVAGL 121 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSFSS ++YP VDD I+IEI+ Sbjct: 122 KSATIRIMGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINP 181 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLY Sbjct: 182 ADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLY 241 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ELE+QK+ E +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD Sbjct: 242 ELEMQKKNANRQEMEENKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQSVLDGDLDK 300 Query: 346 FMKATLAI 353 F++A+L Sbjct: 301 FIEASLKA 308 >gi|163815255|ref|ZP_02206632.1| hypothetical protein COPEUT_01415 [Coprococcus eutactus ATCC 27759] gi|158449450|gb|EDP26445.1| hypothetical protein COPEUT_01415 [Coprococcus eutactus ATCC 27759] Length = 358 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 121/351 (34%), Positives = 197/351 (56%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + V +L +N + DP + + + + LM+E+ L + KE +D Sbjct: 1 MFDRLEELVDKLDTINNQLTDPDVVTDQNKFRKLMKEQSDLVPIVDKYKEYKDAKTTIED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 LE+ EE+D + + + + K +E + L DS + +E+ AGAGG Sbjct: 61 SLEILEEENDEELREMAKEEMNDAKSRLETIEQELKILLLPKDPNDSKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY ++ ++ K+K E + +++ G K A +I G AY +K E GV Sbjct: 121 DEAALFAYEIYRMYQKYVDQFKWKVELMSVNENGIGGFKEAVFMITGDGAYSKMKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +S R HTS ++ V P + +++EI+++D RID RASG GGQ VNTTD Sbjct: 181 HRVQRIPKTESGGRIHTSTVTVAVMP-EAEEVDVEINDNDIRIDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V+ Q E+SQ +NKA+A+ +LR+KLY++ELQK+ + K++IG Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQLQNKAKAFALLRSKLYDMELQKQHD--AEAADRKSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++GDL++ + + +A + Sbjct: 298 TGDRSEKIRTYNF-PEGRVTDHRIKLTLYKLDQIMNGDLNELIDSLIAADQ 347 >gi|288803779|ref|ZP_06409207.1| peptide chain release factor 2, programmed [Prevotella melaninogenica D18] gi|302345945|ref|YP_003814298.1| putative peptide chain release factor 2 [Prevotella melaninogenica ATCC 25845] gi|288333766|gb|EFC72213.1| peptide chain release factor 2, programmed [Prevotella melaninogenica D18] gi|302150148|gb|ADK96410.1| putative peptide chain release factor 2 [Prevotella melaninogenica ATCC 25845] Length = 371 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 122/359 (33%), Positives = 206/359 (57%), Gaps = 12/359 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L D D +T+ P W + A+ M++ + ++ + + Sbjct: 10 IQERTEALHRYLDIDKKRIEFEEEQLRTQAPDFWDDPARAQEQMKKVKDIEKWVKDYDKA 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + + D+ +E ++ +E + +++L E D + ++++ Sbjct: 70 RALADEVQLAFDFYK--DELVTEEEVDTAYAKVLKVIEGLELKNMLRQEEDPMECVMKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWL 181 +GAGGTESQDWA+ML+RMY RW E + ++ +I +G+EAGIKS T+ + G AYG+L Sbjct: 128 SGAGGTESQDWASMLMRMYMRWGEAQGYRVTISDIQEGDEAGIKSVTMKFEGGEYAYGYL 187 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVR+SP+++ +R TSF+S++V P+VDD+IE+ + + DT+R+SGAGGQ Sbjct: 188 KSENGVHRLVRVSPFNAQGKRMTSFASVFVTPLVDDTIEVYVDPARVSWDTFRSSGAGGQ 247 Query: 242 HVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 +VN +S VR+ + ++++ + R Q KN+A+A +L+++LY+ ++KR Sbjct: 248 NVNKVESGVRLRYQYEDPDTGEQEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRM 307 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E E+ K +I WG QIRSYV + VKD RTN + + V+DG +DDF+KA L Sbjct: 308 EEQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKIDDFIKAYLM 365 >gi|315651889|ref|ZP_07904892.1| peptide chain release factor RF1 [Eubacterium saburreum DSM 3986] gi|315485891|gb|EFU76270.1| peptide chain release factor RF1 [Eubacterium saburreum DSM 3986] Length = 356 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 112/350 (32%), Positives = 186/350 (53%), Gaps = 11/350 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68 +FD ++ V + + + + + LM+E+ L + E + D Sbjct: 1 MFDNLEDIVVHYDEIMAELAGGDVANDQNRFRKLMKEQSDLAPLVETYGEYKKAKQLQED 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 L +LE+ EE +E ++ + + + + L D + LE+ AGAGG Sbjct: 61 ALEMLEMNDEEMKEMAKEELAEGKRLEEELSDKLKILLLPKDPNDDKNIMLEIRAGAGGD 120 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMY +AE + +K E +++++ G K ++ G AY LK E GVH Sbjct: 121 EAALFAMQLYRMYVHYAETQNWKVEMIDVNENGIGGYKEVVAMVSGKGAYSKLKYESGVH 180 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS +S+ V P + ++++I +D RID RASG GGQ VNTTDS Sbjct: 181 RVQRVPETESGGRIHTSTASVAVMP-EAEEVDVQIDMNDVRIDVMRASGNGGQCVNTTDS 239 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+TH PTG+V+ Q E+SQ +NK +A+ +LR+KLYE+EL+K++ + +++IG Sbjct: 240 AVRLTHYPTGIVIYSQTEKSQLQNKEKAFTLLRSKLYEIELEKKQ--SAEAADRRSQIGT 297 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R N+ +++GD+ + + +A + Sbjct: 298 GDRSEKIRTYNF-PQGRVTDHRINLTLYKLDKIMNGDIQELIDGCIAADQ 346 >gi|310659612|ref|YP_003937333.1| prfb [Clostridium sticklandii DSM 519] gi|308826390|emb|CBH22428.1| PrfB [Clostridium sticklandii] Length = 328 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 151/326 (46%), Positives = 217/326 (66%), Gaps = 2/326 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W V +A+ M++ + +++ + ++ L D +L ELA E+ ++ Sbjct: 1 MSEPEFWNEVEKAQQTMQKNKVIEDKLEQFASLESELEDAFVLFELADEDASLEKELHSA 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 N + +++ + +LLSG+ D N+A + +HAG+GG ++QDW MLLRMY R+A+ Sbjct: 61 LNSL--EEKIDELKIATLLSGQYDMNNAIVSIHAGSGGLDAQDWTKMLLRMYDRFAQSMG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+ L++ EAGIKS TL I+G NAYG+LK E+GVHR+VRISP+D++ +RHTSF+S+ Sbjct: 119 FRVIELDMIADPEAGIKSVTLKIEGANAYGYLKSEKGVHRIVRISPFDTSGKRHTSFASV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DDSIEI+I+ +D +IDTYRASGAGGQHVN T+SA+RITH+PTG+VVQCQ +RSQ Sbjct: 179 DVIPELDDSIEIDINPADLKIDTYRASGAGGQHVNKTESAIRITHLPTGIVVQCQNQRSQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H NK A ML AKL EL+ + ++ + ++I WG QIRSYV QPY MVKD RTN Sbjct: 239 HSNKETAMKMLMAKLIELKELEHKDKIEDLQGEYSQISWGSQIRSYVFQPYTMVKDHRTN 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355 E V+DG++ F+ A L + Sbjct: 299 TEIGHVQSVMDGNIMPFINAYLKENQ 324 >gi|298346504|ref|YP_003719191.1| peptide subunit release factor RF2 [Mobiluncus curtisii ATCC 43063] gi|298236565|gb|ADI67697.1| peptide chain release factor RF2 [Mobiluncus curtisii ATCC 43063] Length = 376 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 130/357 (36%), Positives = 207/357 (57%), Gaps = 4/357 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL + + D + Q+++ L + P LW + A+ + + + +++ Sbjct: 13 KLRASFATISAVMDPELLTQKIADLTQQAAAPDLWDDQEHAQKVTQSLSAAQADLQRLQK 72 Query: 62 IQDRLCDNL---ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 ++ R+ D L ED +IL + + +K +++ + ++LL+GE D A Sbjct: 73 MRARIDDMEALVELGAEESGEDRDAILVDAEQTYETLKRDLDAMEVKTLLNGEYDERFAV 132 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + + +GAGG ++ D+A MLLRMY R+ E+ + T+ L+ EEAGIKS T + P AY Sbjct: 133 VTIRSGAGGVDAADFAQMLLRMYLRYCERHHYATKVLDTSYAEEAGIKSVTFQVDAPYAY 192 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G L E G HRL R+SP+++ +R TSF+++ V P+++ + IE+ ESD +ID +R+SG Sbjct: 193 GMLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLIETTDHIEVPESDIKIDVFRSSGP 252 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTTDSAVR+TH+PTG+V+ Q E+SQ +N+A A +L+++L L Q+ + Sbjct: 253 GGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLMLRHQQEHDKKKE 312 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSY L Q+VKDLRT E +P V DGDLD F+ A + +K Sbjct: 313 LAGD-VKASWGDQMRSYFLYGQQLVKDLRTGYESGNPDSVFDGDLDGFIDAAIRWRK 368 >gi|29655248|ref|NP_820940.1| peptide chain release factor 1 [Coxiella burnetii RSA 493] gi|154706179|ref|YP_001425370.1| peptide chain release factor 1 [Coxiella burnetii Dugway 5J108-111] gi|161830069|ref|YP_001596008.1| peptide chain release factor 1 [Coxiella burnetii RSA 331] gi|165924041|ref|ZP_02219873.1| peptide chain release factor 1 [Coxiella burnetii RSA 334] gi|212219474|ref|YP_002306261.1| peptide chain release factor 1 [Coxiella burnetii CbuK_Q154] gi|30581025|sp|P47849|RF1_COXBU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189039967|sp|A9KGY3|RF1_COXBN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189039968|sp|A9N9K2|RF1_COXBR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238058710|sp|B6J625|RF1_COXB1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|29542520|gb|AAO91454.1| bacterial peptide chain release factor 1 (RF-1) [Coxiella burnetii RSA 493] gi|154355465|gb|ABS76927.1| bacterial peptide chain release factor 1 (RF-1) [Coxiella burnetii Dugway 5J108-111] gi|161761936|gb|ABX77578.1| peptide chain release factor 1 [Coxiella burnetii RSA 331] gi|165916526|gb|EDR35130.1| peptide chain release factor 1 [Coxiella burnetii RSA 334] gi|212013736|gb|ACJ21116.1| bacterial Peptide Chain Release Factor 1 (RF-1) [Coxiella burnetii CbuK_Q154] Length = 361 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 111/343 (32%), Positives = 175/343 (51%), Gaps = 9/343 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72 R S + D + + + L +E L+ + ++ Q + + Sbjct: 9 LKTLTYRYSEIGGLLSDSTVINDQDRYRELGKEYAQLEPIVKCFQQFQQNEKAIESAEEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + E +E + + + + + D + +LE+ AG GG E+ Sbjct: 69 QQEKDPELRKLAEEELEQLTLKKEELEDQLKLLLVPKDPNDERNVFLEIRAGTGGNEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY R+AE + ++ + H+GE G K + G Y LK E G HR+ R Sbjct: 129 FAGDLFRMYARYAETKGWRVNIVSAHEGEHGGFKEVIARVIGEGVYSQLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ + P VD+ +I+I+ ++ RIDT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPVTESQGRIHTSACTVAIMPEVDEIDQIKINPAELRIDTFRASGAGGQHVNRTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTGVVV+CQ ERSQHKNKA+A ++L++KL E K+++ K+ +G G Sbjct: 249 THLPTGVVVECQDERSQHKNKARAMSLLQSKLLAAERAKQDQEQ--AAKRKSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ +V++GDLD + + Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYQLDEVIEGDLDPVIGPLIR 348 >gi|269976501|ref|ZP_06183486.1| peptide chain release factor 2 [Mobiluncus mulieris 28-1] gi|269935302|gb|EEZ91851.1| peptide chain release factor 2 [Mobiluncus mulieris 28-1] Length = 378 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 129/362 (35%), Positives = 206/362 (56%), Gaps = 9/362 (2%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL + + + D ++++ L + P LW + A+ + + + + ++ Sbjct: 12 KLQATFDTVEAVMDPALLQKKIADLTAQASAPDLWDDQENAQKITQTLSATQSDLERLQT 71 Query: 62 IQDRLCDN--------LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113 ++ RL D L+ D +I+++ + + ++ + +LL+GE D Sbjct: 72 MKTRLEDFAALVELGGEELMSEDGRADGQAIMEDAEATYKTLAADLAALEVRTLLNGEYD 131 Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 A + + +GAGG ++ D+A MLLRMY RWAE+ + T+ ++ EEAGIKSAT I Sbjct: 132 ERFAVVTIRSGAGGVDAADFAQMLLRMYLRWAERHGYPTKVMDTSYAEEAGIKSATFEID 191 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 P AYG L E G HRL R+SP+++ +R TSF+++ V P+++ + I++ ESD +ID + Sbjct: 192 APYAYGRLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLIETTDHIDVPESDIKIDVF 251 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 R+SG GGQ VNTTDSAVR+TH+PTG+V+ Q E+SQ +N+A A +L+++L L Q+ Sbjct: 252 RSSGPGGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLLLRHQQEH 311 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 E + WG Q+RSY L Q+VKDLRT E +P V DGDLD F+ + Sbjct: 312 EKKKELAGD-VKASWGDQMRSYFLYGQQLVKDLRTGHESNNPDAVFDGDLDTFIDEGIRW 370 Query: 354 KK 355 +K Sbjct: 371 RK 372 >gi|115524982|ref|YP_781893.1| peptide chain release factor 2 [Rhodopseudomonas palustris BisA53] gi|115518929|gb|ABJ06913.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodopseudomonas palustris BisA53] Length = 322 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 201/309 (65%), Positives = 252/309 (81%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L++++ I +++ L DN+ ++EL E D S++ E L+++K +V ++ E Sbjct: 1 MQERTSLEDSLDGIGKVERELDDNVGMIELGEAEGDDSVVAEAEAALKKLKKDVARRELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D+YLEVHAGAGGTESQDWA+MLLRMYTRWAEK FK E LE +GEEAGI Sbjct: 61 ALLSGEADRFDSYLEVHAGAGGTESQDWASMLLRMYTRWAEKHGFKIEYLEETEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G NAYGWLK E GVHRLVRISPYDSN+RRHTSFSS+ ++PVVD+SI+I+I+E Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPYDSNARRHTSFSSVQIFPVVDNSIKIDIAE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R+DT R+ GAGGQHVN T+SAVR+TH+PTGV V CQ RSQHKNKAQAW+MLRA+LY Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHVPTGVAVVCQAGRSQHKNKAQAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KREE A +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ + + VLDGDLD+ Sbjct: 241 EIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300 Query: 346 FMKATLAIK 354 FM ATLA + Sbjct: 301 FMAATLAQR 309 >gi|295697770|ref|YP_003591008.1| peptide chain release factor 1 [Bacillus tusciae DSM 2912] gi|295413372|gb|ADG07864.1| peptide chain release factor 1 [Bacillus tusciae DSM 2912] Length = 355 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 110/347 (31%), Positives = 178/347 (51%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +R L + DP + + + + +E+ L+ + +E + + E+ Sbjct: 5 LQAIEERYEDLGRRLCDPDVLADPEKLRTYSKEQADLEETVQTYREYKQVVSALREAKEM 64 Query: 76 ALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + R + Q L D + +E+ AGG E+ Sbjct: 65 FEERLDEEMREWVKSEIAALGHRREELEAKLQILLLPRDPNDDKNVIVEIRGAAGGEEAS 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYTR+AE++ ++ E ++ H + G K ++G AY LK E G HR+ Sbjct: 125 LFAADLFRMYTRYAERQGWRVEMIDSHPTDLGGFKEVVFSVQGRGAYSRLKFESGAHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ + +E+EI E D RIDT+ ++G GGQ VNTT SAVR Sbjct: 185 RVPTTESGGRIHTSTATVA-VMPEVEEVEVEIHEKDLRIDTFCSTGPGGQSVNTTQSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV CQ E+SQ KN+ +A +LRA+LYE ++++E + ++ K+ +G G Sbjct: 244 ITHLPTGIVVSCQDEKSQLKNREKAMRVLRARLYEKYRREQQEE--LAQTRKSLVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + VLDGDLD+ + A +A + Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTLHRLDAVLDGDLDEIIHALIAADR 347 >gi|254374925|ref|ZP_04990406.1| peptide chain release factor 1 [Francisella novicida GA99-3548] gi|151572644|gb|EDN38298.1| peptide chain release factor 1 [Francisella novicida GA99-3548] Length = 361 Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats. Identities = 115/346 (33%), Positives = 186/346 (53%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R ++ + + + + + L +E HL+ + KE L D E+ Sbjct: 9 LQSLIERHEEVSALLSEVGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALEDKQAAYEM 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + + + I+ Q L D + +LE+ AG GG E+ Sbjct: 69 LNEKDAELVEMAKEELKLANEAIEKLESELQILLLPRDPNDDANVFLEIRAGTGGDEASI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L +MY+++AE+R +K E + +GE G K I G Y LK E G HR+ R Sbjct: 129 FSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ I+I+ +D ++DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++ ++ K+ +G G Sbjct: 249 THIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQ--SDTRKSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +V++G LD ++ + + Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQ 351 >gi|623028|emb|CAA55563.1| unnamed protein product [Coxiella burnetii] Length = 361 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 111/343 (32%), Positives = 174/343 (50%), Gaps = 9/343 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72 R S + D + + + L +E L+ + ++ Q + + Sbjct: 9 LKTLTYRYSEIGGLLSDSTVINDQDRYRELGKEYAQLEPIVKCFQQFQQNEKAIESAEEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + E +E + + + + D + +LE+ AG GG E+ Sbjct: 69 QQEKDPELRKLAEEELEQLTLKKEELEDQLNLLLVPKDPNDERNVFLEIRAGTGGNEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY R+AE + ++ + H+GE G K + G Y LK E G HR+ R Sbjct: 129 FAGDLFRMYARYAETKGWRVNIVSAHEGEHGGFKEVIARVIGEGVYSQLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ + P VD+ +I+I+ ++ RIDT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPVTESQGRIHTSACTVAIMPEVDEIDQIKINPAELRIDTFRASGAGGQHVNRTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTGVVV+CQ ERSQHKNKA+A ++L++KL E K+++ K+ +G G Sbjct: 249 THLPTGVVVECQDERSQHKNKARAMSLLQSKLLAAERAKQDQEQ--AAKRKSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ +V++GDLD + + Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYQLDEVIEGDLDPVIGPLIR 348 >gi|289523200|ref|ZP_06440054.1| peptide chain release factor 1 [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503743|gb|EFD24907.1| peptide chain release factor 1 [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 358 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 121/346 (34%), Positives = 188/346 (54%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ ++ L TK DP + N + L +E + + +E + L L Sbjct: 8 LDDLERKYQELETKLSDPDVISNPAVLQRLAKEHSEMSKVVEKYREYRQAQKRLEEALAL 67 Query: 76 ALEEDDCSILQETSDNLQ---RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D+ + Q ++ E L D +E+ AGAGG E+ Sbjct: 68 TEEDDEDLRELAREEANQLKNIVEELEEELALLLLPKDPNDERSVIVEIRAGAGGEEAAL 127 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY R+AE++++K E L ++ G K ++G +AY LK E GVHR+ R Sbjct: 128 FAADLYRMYVRYAERKRWKVELLTANETGIGGYKEIVFRVEGQDAYSVLKYESGVHRVQR 187 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +++ R HTS +++ V P D +++EI D +IDT+RASGAGGQ+VN TDSAVRI Sbjct: 188 VPVTEASGRIHTSTATVAVLP-EPDEVDVEIRPEDLKIDTFRASGAGGQYVNMTDSAVRI 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV CQ ERSQ KN+A+A +LRAKLY++E+++++E + + +IG G Sbjct: 247 THIPTGIVVTCQDERSQLKNRAKAMQLLRAKLYDMEIRRQQE--AMASERRGQIGSGDRS 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + + ++L+GDLD+ + A + Sbjct: 305 ERIRTYNF-PQNRVTDHRIGLTLHNLDEILEGDLDELLYALATADQ 349 >gi|309973234|gb|ADO96435.1| Peptide chain release factor 1 [Haemophilus influenzae R2846] Length = 361 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 110/344 (31%), Positives = 181/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R L D + + + + +E L+ + + L Sbjct: 10 LESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQNIEEAEIL 69 Query: 76 ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q + + I+ + Q L D + YLE+ AG GG E+ +A Sbjct: 70 LDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 129 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE ++++ E L ++ E+ G K + + G YG LK E G HR+ R+ Sbjct: 130 GDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVTGEGVYGQLKFESGGHRVQRVP 189 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 190 KTESQGRIHTSACTVAVMPKLPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 249 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++ + + +G G + Sbjct: 250 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQ--TDMRRNLLGSGDRSDK 307 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ ++++G +D+ ++ + + Sbjct: 308 IRTYNY-PQGRVTDHRINLTIYRLDEIMNGKIDELIQPIITEYQ 350 >gi|315657060|ref|ZP_07909945.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492452|gb|EFU82058.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 376 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 130/357 (36%), Positives = 207/357 (57%), Gaps = 4/357 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL + + D + Q+++ L + P LW + A+ + + + +++ Sbjct: 13 KLRASFATISAVMDPELLTQKIADLTQQAAAPDLWDDQEHAQKVTQSLSAAQADMQRLQK 72 Query: 62 IQDRLCDNL---ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 ++ R+ D L ED +IL + + +K +++ + ++LL+GE D A Sbjct: 73 MRARIDDMEALVELGAEESGEDRDAILADAEQTYETLKQDLDAMEVKTLLNGEYDERFAV 132 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + + +GAGG ++ D+A MLLRMY R+ E+ + T+ L+ EEAGIKS T + P AY Sbjct: 133 VTIRSGAGGVDAADFAQMLLRMYLRYCERHHYATKVLDTSYAEEAGIKSVTFQVDAPYAY 192 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G L E G HRL R+SP+++ +R TSF+++ V P+++ + IE+ ESD +ID +R+SG Sbjct: 193 GMLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLIETTDHIEVPESDIKIDVFRSSGP 252 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTTDSAVR+TH+PTG+V+ Q E+SQ +N+A A +L+++L L Q+ + Sbjct: 253 GGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLMLRHQQEHDKKKE 312 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSY L Q+VKDLRT E +P V DGDLD F+ A + +K Sbjct: 313 LAGD-VKASWGDQMRSYFLYGQQLVKDLRTGYESGNPDSVFDGDLDGFIDAAIRWRK 368 >gi|255530197|ref|YP_003090569.1| hypothetical protein Phep_0282 [Pedobacter heparinus DSM 2366] gi|255343181|gb|ACU02507.1| hypothetical protein Phep_0282 [Pedobacter heparinus DSM 2366] Length = 357 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 144/350 (41%), Positives = 216/350 (61%), Gaps = 3/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ L D +N ++ + T P+ W + +A+ + E ++ Sbjct: 9 LRDRVASLRRYLDVENRLEDIRIEQELTLQPNFWDDPKKAEQHIAEINSKKVWTDAWQQA 68 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L D L+L + D + + +E + +++L + D A +++ Sbjct: 69 NSLLEDTLVLFDFLQSGDATEEEMQEQYDA--CLKAIEDLELKNMLKSKEDQLPAVMQIT 126 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA ML+RMY W EK +K + +GE AG+KS TL G AYG+LK Sbjct: 127 AGAGGTESCDWAYMLMRMYMMWGEKNGYKITEQDYQEGEIAGVKSVTLQFSGDFAYGYLK 186 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVRISP+DSN+RRHTSF+S++VYP+VDD+IEIE+ +S+ +T+R+ GAGGQ+ Sbjct: 187 GENGVHRLVRISPFDSNARRHTSFASVYVYPLVDDTIEIEVKDSEIEFETFRSGGAGGQN 246 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++AVR+ H P+G++++ Q+ RSQ +NK A +L+++LYE E++KR E + E + Sbjct: 247 VNKVETAVRLYHKPSGIIIKNQESRSQLQNKENAIRLLKSQLYEAEMRKRMEATALIEGN 306 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K +I WG QIRSYVL + VKD RTN + ++P VLDG+L+DF+KA L Sbjct: 307 KKKIEWGSQIRSYVLDD-RRVKDHRTNFQSSNPQAVLDGELNDFLKAYLM 355 >gi|56707338|ref|YP_169234.1| peptide chain release factor 1 [Francisella tularensis subsp. tularensis SCHU S4] gi|110669808|ref|YP_666365.1| peptide chain release factor 1 [Francisella tularensis subsp. tularensis FSC198] gi|224456401|ref|ZP_03664874.1| peptide chain release factor 1 [Francisella tularensis subsp. tularensis MA00-2987] gi|254370015|ref|ZP_04986022.1| peptide chain release factor 1 [Francisella tularensis subsp. tularensis FSC033] gi|254874173|ref|ZP_05246883.1| peptide chain release factor 1 [Francisella tularensis subsp. tularensis MA00-2987] gi|61214577|sp|Q5NIA8|RF1_FRATT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361541|sp|Q14JR1|RF1_FRAT1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|54112995|gb|AAV29131.1| NT02FT0305 [synthetic construct] gi|56603830|emb|CAG44801.1| peptide chain release factor 1 [Francisella tularensis subsp. tularensis SCHU S4] gi|110320141|emb|CAL08184.1| peptide chain release factor 1 [Francisella tularensis subsp. tularensis FSC198] gi|151568260|gb|EDN33914.1| peptide chain release factor 1 [Francisella tularensis subsp. tularensis FSC033] gi|254840172|gb|EET18608.1| peptide chain release factor 1 [Francisella tularensis subsp. tularensis MA00-2987] gi|282158463|gb|ADA77854.1| peptide chain release factor 1 [Francisella tularensis subsp. tularensis NE061598] Length = 361 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 114/346 (32%), Positives = 186/346 (53%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R ++ + + + + + L +E HL+ + K+ L D E+ Sbjct: 9 LQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKKYTQALEDKQAAYEM 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + + + I+ Q L D + +LE+ AG GG E+ Sbjct: 69 LNEKDAELVEMAKEELKLANEAIEKLESELQIFLLPRDPNDDANVFLEIRAGTGGDEASI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L +MY+++AE+R +K E + +GE G K I G Y LK E G HR+ R Sbjct: 129 FSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ I+I+ +D ++DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++ ++ K+ +G G Sbjct: 249 THIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQ--SDTRKSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +V++G LD ++ + + Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQ 351 >gi|283778052|ref|YP_003368807.1| peptide chain release factor 2 [Pirellula staleyi DSM 6068] gi|283436505|gb|ADB14947.1| bacterial peptide chain release factor 2 (bRF- 2) [Pirellula staleyi DSM 6068] Length = 398 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 141/353 (39%), Positives = 218/353 (61%), Gaps = 2/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+ ++++ L G D+D ++ FL + P W +A ++ + + L ++ + Sbjct: 33 KIQQRVDQLRGSLDYDGKKKQFEFLEARMSQPDFWNVQEKALEVVSQVKSLKAILAPLDA 92 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I + D +L++A +++ + I+ +++ + ++LL+G D+ A + + Sbjct: 93 IVNSASDLPGMLDMAGDDESFAADLRAEIER--IEKQLDDLELKALLNGPLDNVGAIVTI 150 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 HA GGT++ DWA MLLRMY WA+K ++ + E + + AGI +ATL+I+GP AYG+L Sbjct: 151 HARDGGTDASDWAEMLLRMYIGWAQKNGYEYKVTERDEADVAGISAATLVIRGPMAYGYL 210 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE G HRLVRISP++S +R TSF+++ V P + D E+ I++ D R DTYRA GAGGQ Sbjct: 211 KGESGHHRLVRISPFNSEGKRQTSFAAVDVLPEIADDFEVVINKEDIREDTYRAGGAGGQ 270 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVR+TH P+G+VVQCQ ERSQH N+A A+ MLRA+L E ++RE + Sbjct: 271 HVNKTESAVRLTHFPSGIVVQCQNERSQHSNRATAYKMLRARLARAEEERREAESASKYK 330 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 S ++G+G QIR+Y L P Q VKD RT + VLDG+L F+ + L + Sbjct: 331 SAAKVGFGSQIRNYFLHPTQRVKDSRTGYSEGDFHSVLDGNLQGFIDSVLKWR 383 >gi|315186593|gb|EFU20352.1| bacterial peptide chain release factor 1 (bRF-1) [Spirochaeta thermophila DSM 6578] Length = 357 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 116/342 (33%), Positives = 178/342 (52%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R L T DP ++ + + L +E HL + + + + Sbjct: 7 IEELTTRFKELETALADPSVFNDQKRYRELAQEHAHLSQVVRTAEHYRRLEARLEEAKTV 66 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 EEDD + + + ++ ++ E+ + + D + LE+ AG GG E+ Sbjct: 67 LEEEDDHELKEMAREEIKALEGEIARTEQRLKLLLVPPDPLDGKNIILEIRAGTGGEEAA 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R+AE++ +K E +E + E G + I G YG L+ E G HR+ Sbjct: 127 LFAADLYRMYARYAERKGWKMEIMEASETELGGFRELVCAISGKEVYGHLRFESGGHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS ++ V P +++ I D R+D +R+SG GGQ VNTTDSAVR Sbjct: 187 RIPVTESGGRIHTSAVTVAVLPEPEETEVE-IRPEDIRVDVFRSSGPGGQSVNTTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV CQ E+SQHKNKA+A +LRA+LY E++K+ + + +++IG G Sbjct: 246 ITHLPTGLVVSCQDEKSQHKNKAKALKILRARLY--EMEKQRQESERAAMRRSQIGSGDR 303 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R N+ V+DGDLD+ + A Sbjct: 304 SERIRTYNF-PQNRVTDHRINLTLYKLEAVMDGDLDEIIDAL 344 >gi|319898909|ref|YP_004159002.1| peptide chain release factor RF-2 [Bartonella clarridgeiae 73] gi|319402873|emb|CBI76424.1| peptide chain release factor RF-2 [Bartonella clarridgeiae 73] Length = 333 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 213/320 (66%), Positives = 263/320 (82%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 LW N +A+ +MRERQ+L+N+++ + L + + L+ + EE+D I+ E + + + Sbjct: 2 LWNNAQKAQDVMRERQNLENSMNSTQLFTQTLEECIELIAMGEEENDMGIIAEAENTILQ 61 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 +K E++ ++ E LLSGEADSND YLE+HAGAGG ESQDWA+MLLRMY+RWAE+ K K E Sbjct: 62 LKKEIDKRRIEMLLSGEADSNDTYLEIHAGAGGIESQDWASMLLRMYSRWAEQNKMKVEV 121 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 LE HDGEEAGIKSATLLIKG NAYG LK E GVHRLVRISPYDSN+RRHTSF+SIW+YPV Sbjct: 122 LETHDGEEAGIKSATLLIKGHNAYGLLKTESGVHRLVRISPYDSNARRHTSFASIWIYPV 181 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 V+++IE+++S++D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A Sbjct: 182 VNENIEVDLSDADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRA 241 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 AW+MLRA+LYE EL+KREE N E+SKTEIGWG QIRSYVLQPYQ+VKDLRT +E T Sbjct: 242 TAWSMLRARLYEEELKKREEETNAVEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTD 301 Query: 335 PSDVLDGDLDDFMKATLAIK 354 P VL+GDLD F++A LA + Sbjct: 302 PQTVLNGDLDIFIEAALAQR 321 >gi|302820696|ref|XP_002992014.1| hypothetical protein SELMODRAFT_134701 [Selaginella moellendorffii] gi|300140136|gb|EFJ06863.1| hypothetical protein SELMODRAFT_134701 [Selaginella moellendorffii] Length = 382 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 136/356 (38%), Positives = 208/356 (58%), Gaps = 3/356 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++ ++ L D + L+ L + DP W+ +A+ ++ E + + ++ K Sbjct: 19 VAARVRQLLDSADLEQQEAVLADLENQASDPAFWEERSKAQKILSELNEIKDRVNLYKTF 78 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQ--RIKLEVEYKQFESLLSGEADSNDAYLE 120 + ++ D ++EL E + + I ++ + LLSG D A + Sbjct: 79 RAKVDDAQCIVELLEEMESPDAALKLEAAETVSWITAAMDRFELNKLLSGTYDKEGARIT 138 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + AGAGGT++QDWA MLLRMY RWA + FK+ +E GEEAGIKSATL I G AYG+ Sbjct: 139 ITAGAGGTDAQDWAEMLLRMYQRWATRSGFKSTVVESSPGEEAGIKSATLEIDGRYAYGY 198 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAG 239 + GE+G HRLVR SP++S R TSF+ + V P+ + IE+EI E D I T R+ G G Sbjct: 199 ISGEKGTHRLVRQSPFNSKGLRQTSFAGVEVMPLLEESEIEVEIPEGDLEITTCRSGGKG 258 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ+VN ++AVR+THIPTG+ ++C +ERSQ +NK +A +L++KL + +R Sbjct: 259 GQNVNKVETAVRVTHIPTGIALRCSEERSQLQNKIKAIALLKSKLLVILEDQRAAEIKEI 318 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG+QIR+YV PY++VKDLRTN+E + S ++DG+L+ + A L K+ Sbjct: 319 RGDVVKAEWGQQIRNYVFHPYKLVKDLRTNVETSDISGIMDGNLEPLLTAYLMSKQ 374 >gi|123967735|ref|YP_001008593.1| peptide chain release factor 2 [Prochlorococcus marinus str. AS9601] gi|123197845|gb|ABM69486.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. AS9601] Length = 354 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 140/344 (40%), Positives = 204/344 (59%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 L +FD + L + P W N EAK M + + + + + + D Sbjct: 2 LRIVFDVPRLKAKRKELEQISAQPEFWDNQEEAKKQMLILDDVKAQLELLDKWKTFISDA 61 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LEL E + ++ E+ L++++ ++ +FE LL GE D A + ++AGAGGT+ Sbjct: 62 NASLELYSLEPEEEMILESQLGLKKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGGTD 121 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDW +LLRMY+RWA+ + E+ GEEAGIKS T I+G AYG+L+ E+G HR Sbjct: 122 AQDWVEILLRMYSRWADNNQMSLVINELSQGEEAGIKSVTFEIEGKYAYGYLQHEKGTHR 181 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+++N +R TSF+ + V P +DD+I ++I E D I T R+ GAGGQ+VN ++A Sbjct: 182 LVRISPFNANGKRQTSFAGVEVMPKLDDNISLDIPEKDLEITTSRSGGAGGQNVNKVETA 241 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRI H+P+G+ V+C QERSQ +NK +A +L++KL + ++R + E WG Sbjct: 242 VRIVHLPSGISVRCTQERSQLQNKEKAMLLLKSKLLVIAKEQRAAEVADIKGDIVEAAWG 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIR+YV PYQMVKDLRT E VLDG LD F+ L + Sbjct: 302 NQIRNYVFHPYQMVKDLRTMQETNELDSVLDGGLDPFIHELLRM 345 >gi|295094043|emb|CBK83134.1| bacterial peptide chain release factor 1 (bRF-1) [Coprococcus sp. ART55/1] Length = 358 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 120/351 (34%), Positives = 195/351 (55%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + V +L +N + DP + + + + LM+E+ L + E +D Sbjct: 1 MFDRLEELVDKLDTINNQLTDPDVVSDQNKFRKLMKEQSDLSPIVEKYHEYKDAKTTIED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 LE+ EE D + + + + K +E + L DS + +E+ AGAGG Sbjct: 61 SLEILEEESDEELREMAKEEMNEAKANLETIEQELKILLLPKDPNDSKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY ++ ++ K+K E + +++ G K A +I G AY +K E GV Sbjct: 121 DEAALFAYEVYRMYQKYVDQFKWKVELMSVNENGIGGFKEAVFMITGDGAYSKMKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +S R HTS ++ V P + +++EI+E+D RID RASG GGQ VNTTD Sbjct: 181 HRVQRIPKTESGGRIHTSTITVAVMP-EAEEVDVEINENDIRIDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V+ Q E+SQ +NKA+A+ +LR+KLY++ELQK+ + +++IG Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQLQNKAKAFALLRSKLYDMELQKQHD--AEAADRRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++GDL++ + + +A + Sbjct: 298 TGDRSEKIRTYNF-PEGRVTDHRIKLTLYKLDQIMNGDLNELIDSLIAADQ 347 >gi|257063623|ref|YP_003143295.1| peptide chain release factor 2 [Slackia heliotrinireducens DSM 20476] gi|256791276|gb|ACV21946.1| peptide chain release factor 2 [Slackia heliotrinireducens DSM 20476] Length = 369 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 141/353 (39%), Positives = 210/353 (59%), Gaps = 2/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+ ++ + L LN + P W + A + + + + + + Sbjct: 13 ELAERVAAAREYRHINENESLLEKLNEEIASPDFWNDSQNALQVSKRASEVRSILDEYEH 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L D EL+ +++ + ++ L+ + S SGE D DA + + Sbjct: 73 VASLLEDARTADELSADDEMFAEERDELRRQLSDLLDGL--EVSSWFSGEMDPCDAIVSI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 + G GG E+QDW +ML +MY+++AEK+ +K L+I GE G+ A + I+G NAYG L Sbjct: 131 NPGQGGLEAQDWVDMLYKMYSKYAEKKGWKVRLLDITPGEVIGLDRAVIQIEGKNAYGML 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVRISP D RR T+F+ + V PVVDD IE++++ +D R+D YR+SG GGQ Sbjct: 191 RSENGVHRLVRISPTDDKKRRQTTFAGVEVLPVVDDEIEVDLNVNDVRVDVYRSSGPGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPTG+VV CQ ++SQ +NK A+ +LRAKLYELE QKREE + Sbjct: 251 CVNTTDSAVRLTHIPTGIVVTCQNQKSQLQNKDAAFKVLRAKLYELERQKREEEIDALRG 310 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + + +G QIR+YVL PYQ+VKDLR+ IE + VL GD+++F+ + Sbjct: 311 ERMDNSFGSQIRNYVLYPYQLVKDLRSGIETGNVDAVLSGDIEEFVIGYHRWR 363 >gi|282853672|ref|ZP_06263009.1| peptide chain release factor 2 [Propionibacterium acnes J139] gi|282583125|gb|EFB88505.1| peptide chain release factor 2 [Propionibacterium acnes J139] gi|314983205|gb|EFT27297.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA3] gi|315092426|gb|EFT64402.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA4] Length = 368 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 153/353 (43%), Positives = 221/353 (62%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L+ + + D + ++ L + P+LW + A+ + L I ++ + Sbjct: 13 LDASLSSIENVLDPEAKKAEIADLEKQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +LLE A +DD L E + +++ E++ + +LLSG+ D +A + + Sbjct: 73 RARIEDVHVLLEFAAADDDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A MLLRMY RW+E+ +K E L+ EEAGIKSAT ++ P AYG L Sbjct: 133 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ ++I ESD R+D + ASG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A +L+AKL E +++E N +S Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSE 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRTN E + V DGD+DDF+ A + ++ Sbjct: 313 GN--SWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 363 >gi|325268643|ref|ZP_08135273.1| peptide chain release factor RF2 [Prevotella multiformis DSM 16608] gi|324989171|gb|EGC21124.1| peptide chain release factor RF2 [Prevotella multiformis DSM 16608] Length = 371 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 124/359 (34%), Positives = 204/359 (56%), Gaps = 12/359 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + + L D D +T+ P W + A+ M++ + ++ I E Sbjct: 10 IQVRTDALHRYLDIDRKRIEFEEEQLRTQAPDFWDDPKRAQEQMKKVKEIEKWIKGYDEA 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + + D+ +E + +E + +++L E D + ++++ Sbjct: 70 RSLTDEAQLAFDFYK--DELVTEEEVDTAYDKAFKVIEDLELKNMLRQEEDPMECVMKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWL 181 +GAGGTESQDWA+ML+RMY RW E +K +I +G+EAGIKS T+ + G AYG+L Sbjct: 128 SGAGGTESQDWASMLMRMYMRWGEAHGYKVTVSDIQEGDEAGIKSVTMKFEGGEYAYGYL 187 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVR+SP+++ +R TSF+S++V P+VDD+IE+ + + DT+R+SGAGGQ Sbjct: 188 KSENGVHRLVRVSPFNAQGKRMTSFASVFVTPLVDDTIEVYVDPARVSWDTFRSSGAGGQ 247 Query: 242 HVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 +VN +S VR+ + ++++ + R Q KN+A+A +L+++LY+ ++KR Sbjct: 248 NVNKVESGVRLRYQYEDPDTGEQEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRM 307 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E E+ K +I WG QIRSYV + VKD RTN + + V+DG +D F+KA L Sbjct: 308 EEQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKIDAFIKAYLM 365 >gi|238759279|ref|ZP_04620445.1| Peptide chain release factor 2 [Yersinia aldovae ATCC 35236] gi|238702440|gb|EEP94991.1| Peptide chain release factor 2 [Yersinia aldovae ATCC 35236] Length = 310 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 171/308 (55%), Positives = 217/308 (70%), Gaps = 1/308 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 +ER L+ +S I ++ + D LLELA+E DD E L + ++ +F Sbjct: 2 GKERSALEEIVSTIDQLDQGMEDVSGLLELAIEADDEETFNEAVAELDTLDGKLGQLEFR 61 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 + SGE DS + YL++ AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E DG+ AG+ Sbjct: 62 RMFSGEYDSANCYLDLQAGSGGTEAQDWASMLLRMYLRWAEARGFKTEIIEESDGDVAGL 121 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G A+GWL+ E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ Sbjct: 122 KSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINP 181 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID YRASGAGGQHVN T+SAVRITH+PT +V QCQ +RSQHKNK QA L+AKLY Sbjct: 182 ADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVTQCQNDRSQHKNKDQAMKQLKAKLY 241 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E E+QK+ + E +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD Sbjct: 242 EFEMQKKNADKQVLEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDK 300 Query: 346 FMKATLAI 353 F++A+L Sbjct: 301 FIEASLKA 308 >gi|332532477|ref|ZP_08408355.1| peptide chain release factor 1 [Pseudoalteromonas haloplanktis ANT/505] gi|332038120|gb|EGI74567.1| peptide chain release factor 1 [Pseudoalteromonas haloplanktis ANT/505] Length = 361 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 117/346 (33%), Positives = 185/346 (53%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72 + V+R + DP + + + L +E L+ + ++ D + Sbjct: 9 LETLVERYEEVQALLSDPSVISDQNRFRALSKEYSELEEIVKTFLNYKETQDDLASAEEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L+ + E +E + +I + + Q L D+N+ ++EV AG GG E+ Sbjct: 69 LKDSDPEMREMAQEEYKEAKAQILVIEDQIQVLMLPKDPRDNNNVFVEVRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE +K+K E + ++GE G K I G YG LK E GVHR+ R Sbjct: 129 FAGDLFRMYSRYAENKKWKVEVVSTNEGEHGGYKEVIANISGEGVYGQLKFESGVHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V V ++ I+I+ +D ++DT+RASGAGGQHVN TDSA+R+ Sbjct: 189 VPETESQGRVHTSACTVAVMAEVPEAEAIQINTADLKVDTFRASGAGGQHVNKTDSAIRL 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTGVVV+CQ +RSQHKN+A+A ++L A+L + E +KR A + +G G Sbjct: 249 THIPTGVVVECQDQRSQHKNRAKAMSVLAARLQQAEDEKR--HAAEASERRDLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ ++V+ GDL + + + Sbjct: 307 ERIRTYNY-PQGRITDHRINLTLYRLNEVVAGDLSAIIDPLMQEHQ 351 >gi|297805172|ref|XP_002870470.1| HCF109 [Arabidopsis lyrata subsp. lyrata] gi|297316306|gb|EFH46729.1| HCF109 [Arabidopsis lyrata subsp. lyrata] Length = 453 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 140/358 (39%), Positives = 212/358 (59%), Gaps = 4/358 (1%) Query: 1 MKL-SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59 +++ S ++ + + Q ++ L +K D W + +A+ + L + + + Sbjct: 85 VEIASARVEEIRASAGLEQLEQEIANLESKATDTSFWDDRTKAQETLSALNDLKDRMRLL 144 Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSNDA 117 E + + D +++L E D + + ++ + LLSG D A Sbjct: 145 SEFKTMVEDAETIVKLTEEMDSTDVSLLEEAMGIIKELNKSLDRFELTQLLSGPYDKEGA 204 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 + + AGAGGT++QDWA+MLLRMY RW EK+++KT+ +E+ +GEEAGIKSATL I+G A Sbjct: 205 VVYITAGAGGTDAQDWADMLLRMYMRWGEKQRYKTKVVEMSNGEEAGIKSATLEIEGRYA 264 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRAS 236 YG++ GE+G HR+VR SP++S R TSFS + V P+ ++++ IEI E D I RA Sbjct: 265 YGYISGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAG 324 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQ+VN ++AVRITHIPTGV V+C +ERSQ NK +A L+AKL + ++R Sbjct: 325 GKGGQNVNKVETAVRITHIPTGVAVRCTEERSQLANKTRALIRLKAKLLVIAEEQRATEI 384 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG+QIR+YV PY++VKD+RT E + + V+DGDLD F+KA L K Sbjct: 385 KEIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDITSVMDGDLDPFIKAYLKHK 442 >gi|300869767|ref|YP_003784638.1| peptide chain release factor RF-2 [Brachyspira pilosicoli 95/1000] gi|300687466|gb|ADK30137.1| peptide chain release factor RF-2 [Brachyspira pilosicoli 95/1000] Length = 312 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 156/309 (50%), Positives = 213/309 (68%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L + I I+ + + L+E+A+E +D + +E ++ + + Sbjct: 1 MKERMLLLDKIEPIENLIKNANNIYELVEMAIESNDTEMEKELETECIELQKVFNELETK 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +L SGE DS +AYL ++AGAGGTES DWA+ML RMY R+ E+ F E + G+EAGI Sbjct: 61 NLFSGEFDSKNAYLTLNAGAGGTESCDWASMLSRMYVRFCERHGFTVETTDELPGDEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K + ++G AYG+L+ E GVHRLVRISP+D+N++RHTSF ++ V P +D+ IE+EI++ Sbjct: 121 KQISFYVQGLYAYGYLRSEIGVHRLVRISPFDANAKRHTSFVAVSVMPDIDEDIEVEINQ 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDTYRASGAGGQHVN T SA+RITHIPT +VVQCQ ERSQH NK A ML+AKLY Sbjct: 181 ADLRIDTYRASGAGGQHVNKTSSAIRITHIPTNIVVQCQAERSQHNNKDMAMKMLKAKLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 +LE +K ++ KT+I WG QIRSYV QPYQMVKDLRT E + + V+DG++D+ Sbjct: 241 QLEKEKLDKEKQKIAGEKTDIAWGNQIRSYVFQPYQMVKDLRTGHETGNMNSVMDGNIDE 300 Query: 346 FMKATLAIK 354 F+ A L + Sbjct: 301 FISAYLKQQ 309 >gi|260593398|ref|ZP_05858856.1| peptide chain release factor 2, programmed [Prevotella veroralis F0319] gi|260534674|gb|EEX17291.1| peptide chain release factor 2, programmed [Prevotella veroralis F0319] Length = 372 Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats. Identities = 124/359 (34%), Positives = 205/359 (57%), Gaps = 12/359 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++ + + L D +T+ P W + A+ M++ + ++ I E Sbjct: 10 ITERTDALHRYLGIDEKRIEFEEEQLRTQAPDFWDDPKRAQEQMKKVKDIEKWIKGYDEA 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + + D+ +E + +E + +++L E D + ++++ Sbjct: 70 RSLTDEVQLAFDFYK--DNLVTEEEVDTAYNKALKAIEDLELKNMLRQEEDPMECVMKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWL 181 +GAGGTESQDWA+ML+RMY RW E +K +I +G+EAGIKS T+ + G AYG+L Sbjct: 128 SGAGGTESQDWASMLMRMYMRWGEAHGYKVTISDIQEGDEAGIKSVTMKFEGGEYAYGYL 187 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVR+SP+++ +R TSF+S++V P+VDD+IE+ + + DT+R+SGAGGQ Sbjct: 188 KSENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDTIEVYVDPARVSWDTFRSSGAGGQ 247 Query: 242 HVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 +VN +S VR+ + ++++ + R Q KN+A+A +L+++LY+ ++KR Sbjct: 248 NVNKVESGVRLRYQYEDPDTGEQEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRM 307 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E E+ K +I WG QIRSYV + VKD RTN + + V+DG +DDF+KA L Sbjct: 308 EEQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKIDDFIKAYLM 365 >gi|210608516|ref|ZP_03287892.1| hypothetical protein CLONEX_00071 [Clostridium nexile DSM 1787] gi|210153007|gb|EEA84013.1| hypothetical protein CLONEX_00071 [Clostridium nexile DSM 1787] Length = 358 Score = 237 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 116/351 (33%), Positives = 186/351 (52%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D+ + R L ++ ++P + + + LM+E+ L + E + Sbjct: 3 MFDKLDDLLIRFEELMSELQEPDVANDQNRFRKLMKEQSDLAPIVEAYNEYKSAKQAITD 62 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127 E+ E D + + + L K VE + E D + +E+ AGAGG Sbjct: 63 SEEMLEMESDEEMRELAKEELSSSKKRVEELEHELKILLLPKDPNDDKNIMVEIRAGAGG 122 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 ES +A + RMY +AE R +KTE + + G K ++ G Y +K E GV Sbjct: 123 DESALFAAEVYRMYVHYAESRHWKTEMISFSENGIGGFKEVVFMVSGQGVYSRMKYESGV 182 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P + +++ I E D RID RASG GGQ VNTTD Sbjct: 183 HRVQRVPETESGGRIHTSTITVAVMP-EAEEVDVVIDEKDIRIDVMRASGNGGQCVNTTD 241 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+V+ Q E+SQ +NK +A+ +LR+KLYELEL+K++ + E+ +++IG Sbjct: 242 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQ--SAEAEARRSQIG 299 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V + R + ++++GDLD+ + + +A + Sbjct: 300 TGDRSEKIRTYNF-PQGRVTEHRIKLTLYKIDNIMNGDLDEIIDSLIAADQ 349 >gi|153956299|ref|YP_001397064.1| peptide chain release factor 1 [Clostridium kluyveri DSM 555] gi|189039965|sp|A5N3J7|RF1_CLOK5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|146349157|gb|EDK35693.1| PrfA [Clostridium kluyveri DSM 555] Length = 357 Score = 237 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 117/347 (33%), Positives = 190/347 (54%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L+ K DP + + + + L +E L+ + +E ++ L D E+ Sbjct: 5 LNFIENKYEELSIKISDPTIIADQKKWQKLCKEHAELEEIVMKYREYKEALQDLEDNKEM 64 Query: 76 ALEEDDCSILQETSDNLQR----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EE D + + + ++R I+ + + L D + ++E+ GAGG E+ Sbjct: 65 LREETDKDMREMEQEEIKRLGDIIEKREDELKILLLPKDPNDDKNVFVEIRGGAGGEEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYTR+AE + +K E + + + G K ++KG +AY LK E G HR+ Sbjct: 125 LFAANLTRMYTRYAEIKGWKVETISLSATDIGGFKEIVFMVKGKDAYSRLKYESGTHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S+ R HTS +++ V P D ++I ++++D RID +RASG GGQ VNTTDSAVR Sbjct: 185 RVPDTESSGRIHTSTATVAVLP-EVDDVDIVVNQNDIRIDVFRASGHGGQCVNTTDSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV CQ E+SQ KNK +A +L+++LYE ++R A+I E K ++G G Sbjct: 244 ITHLPTGLVVSCQDEKSQLKNKEKAMKVLKSRLYEKAQEERN--ASIAEDRKNQVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + L+GD+D+ + A + + Sbjct: 302 SERIRTYNY-PQGRVTDHRIGMTLYKLDSFLNGDIDEIIDALITEDQ 347 >gi|59801687|ref|YP_208399.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA 1090] gi|240017030|ref|ZP_04723570.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA6140] gi|240118391|ref|ZP_04732453.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID1] gi|268604103|ref|ZP_06138270.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID1] gi|75432438|sp|Q5F750|RF1_NEIG1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|59718582|gb|AAW89987.1| putative peptide chain release factor I [Neisseria gonorrhoeae FA 1090] gi|268588234|gb|EEZ52910.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID1] Length = 358 Score = 237 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 119/349 (34%), Positives = 174/349 (49%), Gaps = 8/349 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + RL + P ++ + L RE L + + + D Sbjct: 4 SILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQSDLA 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E+ + + E + + Q L D + ++E+ AG GG E Sbjct: 64 DAEEMLSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEIRAGTGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY+R+AE+ +++ E + ++ E G K I G AY LK E G HR Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ V P D+ +IE++ +D R DT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRTDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREVQAKEAAERKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGDL + A +A + Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQ 349 >gi|194246500|ref|YP_002004139.1| Bacterial peptide chain release factor 2 [Candidatus Phytoplasma mali] gi|193806857|emb|CAP18286.1| Bacterial peptide chain release factor 2 [Candidatus Phytoplasma mali] Length = 363 Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 155/350 (44%), Positives = 226/350 (64%), Gaps = 2/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + L+ L + + +RL LN + W+N +AK + +E + L+ I +++ Sbjct: 13 LKKILDDLEIGMNLNKQKKRLKDLNHLINLSNFWENFEKAKKINQEFKSLNEKIYKMQKF 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D L LL++ ++ L +K ++ + LL+ D +A L +H Sbjct: 73 HEEYRDLLSLLKITK--ENTDDFLFLEQTLLSLKKNIQDFEINILLNQTYDKKNAILILH 130 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGG ESQDW MLLRMY ++A+K+ FK L+ G+ AG+KS +LLIKG AYG+LK Sbjct: 131 PGAGGIESQDWCEMLLRMYQKYAQKKNFKIVVLDYQVGDVAGLKSVSLLIKGVYAYGYLK 190 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DSNS+RHTSF+S V P ++++IEI+I E + +ID +R+SGAGGQH Sbjct: 191 SEKGVHRLVRISPFDSNSKRHTSFTSCDVLPEINENIEIKIKEEELKIDVFRSSGAGGQH 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PT +V+ CQ ERSQ +NK +A +L+ KL++ E++K+E + + Sbjct: 251 VNTTDSAVRLTHLPTNIVINCQNERSQTRNKERALQILKTKLFQREIKKQEINLKLIQGV 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + EI WG QIRSY+ PYQ+VKD RTN+E V+DGDLD F+ + L Sbjct: 311 QKEISWGNQIRSYIFHPYQLVKDHRTNVESYQIESVIDGDLDLFISSFLK 360 >gi|15842676|ref|NP_337713.1| peptide chain release factor 2 [Mycobacterium tuberculosis CDC1551] gi|13882995|gb|AAK47527.1| peptide chain release factor 2 [Mycobacterium tuberculosis CDC1551] Length = 371 Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 156/355 (43%), Positives = 214/355 (60%), Gaps = 4/355 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D + R+ L + DPHLW + A+ + E H + ++E+ Sbjct: 12 LDCTLTTVERVLDVEGLRSRIEKLEHEASDPHLWDDQTRAQRVTSELSHTQGELRRVEEL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYL 119 + RL D +L ELA EE + ++ +K + +LLSGE D +A + Sbjct: 72 RRRLDDLPVLYELAAEEAGAAAADAVAEADAELKSLRADIEATEVRTLLSGEYDEREALV 131 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGG ++ DWA ML+RMY RWAE+ K+ E + EEAGIKSAT + P AYG Sbjct: 132 TIRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYG 191 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L EQG HRLVRISP+D+ SRR TSF+ + V PVV+ + I+I E D R+D YR+SG G Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 251 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+THIP+G+VV CQ E+SQ +NK A +L+AKL E + + Sbjct: 252 GQSVNTTDSAVRLTHIPSGIVVTCQNEKSQLQNKIAAMRVLQAKLLERXRLEERAELDAL 311 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 ++ WG Q+RSYVL PYQMVKDLRT E +P+ VLDGDLD F++A + + Sbjct: 312 KADGGS-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDLDGFLEAGIRWR 365 >gi|296394151|ref|YP_003659035.1| peptide subunit release factor 2 [Segniliparus rotundus DSM 44985] gi|296181298|gb|ADG98204.1| peptide chain release factor 2 [Segniliparus rotundus DSM 44985] Length = 372 Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 151/358 (42%), Positives = 218/358 (60%), Gaps = 8/358 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ L + D D ++ L T+ DP LW++ + + + + + Sbjct: 12 LATTLCTVESALDLDKLRAEIADLETQAADPSLWEDQERGQEVTSGLARKQATLRAVTGL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + RL D +L ELA +E+ + + + ++ E+E + +LL+GE D +A + Sbjct: 72 RSRLDDLHVLYELAEDEEGAQGQEALEEADTERKTLRAEIESLEVRTLLNGEYDEREALV 131 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGG ++ DWA ML+RMY RWAE+ K E +I EEAGIKSAT +K AYG Sbjct: 132 TIRSGAGGIDAADWAQMLMRMYIRWAERHKHPVEVYDISYAEEAGIKSATFAVKSAYAYG 191 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L EQG HRLVRISP+D+ RR TSF+ + V PVV + I++ E++ R+D YR+SG G Sbjct: 192 TLSVEQGTHRLVRISPFDNQGRRQTSFADVEVLPVVGTTDHIDVPEAEIRVDVYRSSGPG 251 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVRITH+PTG+VV CQ E+SQ +NK A +L+AKL E ++R E Sbjct: 252 GQSVNTTDSAVRITHLPTGIVVTCQNEKSQLQNKLSAMRVLQAKLLE---RRRHEEQEQL 308 Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + K + G WG Q+RSYVL PYQMVKDLRT E+++P VLDG +D F+++ + ++ Sbjct: 309 NALKGDGGTSWGTQMRSYVLAPYQMVKDLRTEYEESNPGAVLDGAIDGFLESGIRWRR 366 >gi|92117370|ref|YP_577099.1| peptide chain release factor 2 [Nitrobacter hamburgensis X14] gi|91800264|gb|ABE62639.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrobacter hamburgensis X14] Length = 322 Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 199/309 (64%), Positives = 250/309 (80%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L+++++ I +++ L D + ++EL E+D +I+ ++ + L+ +K EV ++ E Sbjct: 1 MQERTSLEDSLTGIGKVERELEDQIGMIELGEAENDQAIVNDSENALKNLKKEVARRELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD + YLEVHAGAGGTESQDWA+MLLRMY RWAEKR FK E LE GEEAGI Sbjct: 61 ALLSGEADRFNTYLEVHAGAGGTESQDWASMLLRMYARWAEKRGFKIEYLEETPGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ + G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PVVDDSI+I+I E Sbjct: 121 KSATIQVSGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVVDDSIKIDIKE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ RSQHKN+AQAW+MLRA+LY Sbjct: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ++EL+KREE A +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ + S VLDGDLD+ Sbjct: 241 QIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300 Query: 346 FMKATLAIK 354 FM ATLA K Sbjct: 301 FMAATLAQK 309 >gi|254500720|ref|ZP_05112871.1| peptide chain release factor 2 [Labrenzia alexandrii DFL-11] gi|222436791|gb|EEE43470.1| peptide chain release factor 2 [Labrenzia alexandrii DFL-11] Length = 322 Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 222/309 (71%), Positives = 260/309 (84%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD+ I+ +K ++ L DN+ L+EL EDD S++++ + L+ +K +V Q + Sbjct: 1 MRERQQLDDGINGVKGLEQELADNIELIELGEMEDDKSVVEDAEEALRGLKDKVNQLQLD 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD ND YLE+++GAGGTESQDWA+MLLRMY RWAEKR +K E LE HDGEEAGI Sbjct: 61 SLLSGEADGNDTYLEINSGAGGTESQDWASMLLRMYRRWAEKRGYKVELLEYHDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSS WVYPV+DDSIEI+++E Sbjct: 121 KSATLLIKGENAYGWLKTESGVHRLVRISPYDSNARRHTSFSSAWVYPVIDDSIEIDVNE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYRASGAGGQHVNTTDSAVRITH PTG+VVQCQ ERSQHKN+A AW ML+A+LY Sbjct: 181 SDCRIDTYRASGAGGQHVNTTDSAVRITHQPTGIVVQCQSERSQHKNRATAWGMLKARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE AN +SKT+IGWG QIRSYVLQPYQ+VKDLRT ++ TSP DVLDG LD Sbjct: 241 EAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVQSTSPDDVLDGSLDS 300 Query: 346 FMKATLAIK 354 FM+A LA + Sbjct: 301 FMEAALAQR 309 >gi|209964906|ref|YP_002297821.1| peptide chain release factor 2 PrfB [Rhodospirillum centenum SW] gi|209958372|gb|ACI99008.1| peptide chain release factor 2 PrfB [Rhodospirillum centenum SW] Length = 319 Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 194/309 (62%), Positives = 245/309 (79%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRE+ L+NA++ +E++ L D+L L+ELA E D ++ + + +K + E Sbjct: 1 MREKTQLENALTGTRELERDLRDSLELIELAEAEGDAEMVADAEKTIAALKERAAKMELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD+ND +LEV++GAGGTESQDWA MLLRMYTRWAE+ +K + L+ GEEAGI Sbjct: 61 SLLSGEADANDCFLEVNSGAGGTESQDWALMLLRMYTRWAEQHGYKVDELDETPGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ IKG N YGWLK E GVHRLVRISP+DS +RRHTSF+S+ V PV+DD I +EI+E Sbjct: 121 KSATIQIKGHNGYGWLKTESGVHRLVRISPFDSQARRHTSFASVSVTPVIDDRIVVEINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D ++DTYR+SGAGGQHVN TDSAVR+TH+PTG+VV CQQERSQHKN+A+AW+MLRA++Y Sbjct: 181 KDVKVDTYRSSGAGGQHVNKTDSAVRLTHLPTGIVVACQQERSQHKNRAKAWDMLRARIY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KREE A E++KTEIGWG QIRSYVLQPYQMVKDLRT +E + VLDGDLD Sbjct: 241 EMELRKREEAAAALEATKTEIGWGHQIRSYVLQPYQMVKDLRTGVETSDSGGVLDGDLDR 300 Query: 346 FMKATLAIK 354 F++A LA + Sbjct: 301 FLQAALAQR 309 >gi|46200154|ref|YP_005821.1| peptide chain release factor 2 [Thermus thermophilus HB27] gi|55980111|ref|YP_143408.1| peptide chain release factor 2 [Thermus thermophilus HB8] gi|218766794|pdb|3F1E|X Chain X, Crystal Structure Of A Translation Termination Complex Formed With Release Factor Rf2. This File Contains The 30s Subunit, Rf2, Two Trna, And Mrna Molecules Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|218766850|pdb|3F1G|X Chain X, Crystal Structure Of A Translation Termination Complex Formed With Release Factor Rf2. This File Contains The 30s Subunit, Rf2, Two Trna, And Mrna Molecules Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|46197782|gb|AAS82194.1| bacterial peptide chain release factor 2 (RF-2) [Thermus thermophilus HB27] gi|55771524|dbj|BAD69965.1| peptide chain release factor 2 [Thermus thermophilus HB8] Length = 378 Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 152/351 (43%), Positives = 205/351 (58%), Gaps = 5/351 (1%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 GG+FD RL L + EDP LW + A+ + +E L + + ++ Sbjct: 20 RNAWKASGGIFDIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRSLE 79 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L L L+E E+ + L+ +++ ++LL+ +A L + Sbjct: 80 SDLQGLLELMEELPAEEREA----LKPELEEAAKKLDELYHQTLLNFPHAEKNAILTIQP 135 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+ DWA MLLRMYTR+AE++ F+ E +++ G EAGI A +L+KG NAYG L Sbjct: 136 GAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLLSP 195 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+D++ RRHTSF+ + V P VD+ +E+ + + RID RASG GGQ V Sbjct: 196 EAGVHRLVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQGV 255 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSAVR+ H+PTG+ V CQ RSQ KNK A +L+A+LYELE +KREE Sbjct: 256 NTTDSAVRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRGEV 315 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 I WG QIRSYVL VKD RT + + P +VLDGDL D + A L K Sbjct: 316 RPIEWGSQIRSYVLDK-NYVKDHRTGLMRHDPENVLDGDLMDLIWAGLEWK 365 >gi|327312646|ref|YP_004328083.1| putative peptide chain release factor 2 [Prevotella denticola F0289] gi|326945641|gb|AEA21526.1| putative peptide chain release factor 2 [Prevotella denticola F0289] Length = 371 Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 124/359 (34%), Positives = 204/359 (56%), Gaps = 12/359 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + + L D D +T+ P W + A+ M++ + ++ I E Sbjct: 10 IQVRTDALHRYLDIDRKRIEFEEEQLRTQAPDFWDDPKRAQEQMKKVKDIEKWIKGYDEA 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + + D+ +E + +E + +++L E D + ++++ Sbjct: 70 RSLTEETQLAFDFYK--DELVTEEEVDAAYAKALKVIEDLELKNMLRQEEDPMECVMKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWL 181 +GAGGTESQDWA+ML+RMY RW E +K +I +G+EAGIKS T+ + G AYG+L Sbjct: 128 SGAGGTESQDWASMLMRMYMRWGEAHGYKVTVSDIQEGDEAGIKSVTMKFEGGEYAYGYL 187 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVR+SP+++ +R TSF+S++V P+VDD+IE+ + + DT+R+SGAGGQ Sbjct: 188 KSENGVHRLVRVSPFNAQGKRMTSFASVFVTPLVDDTIEVYVDPARVSWDTFRSSGAGGQ 247 Query: 242 HVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 +VN +S VR+ + ++++ + R Q KN+A+A +L+++LY+ ++KR Sbjct: 248 NVNKVESGVRLRYQYEDPDTGEQEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRM 307 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E E+ K +I WG QIRSYV + VKD RTN + + V+DG +D F+KA L Sbjct: 308 EEQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKIDAFIKAYLM 365 >gi|315127042|ref|YP_004069045.1| peptide chain release factor 1 [Pseudoalteromonas sp. SM9913] gi|315015556|gb|ADT68894.1| peptide chain release factor 1 [Pseudoalteromonas sp. SM9913] Length = 361 Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 121/346 (34%), Positives = 184/346 (53%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72 + V+R + DP + + + L +E L+ + Q D + Sbjct: 9 LETLVERYEEVQALLSDPSVISDQNRFRTLSKEYSELEEVVKTFLAYQQAQEDLSSAEEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L+ + E +E + +I + Q L D+N+ +LEV AG GG E+ Sbjct: 69 LKDSDPEMREMAQEEYKEAKAQISTLEDDIQVLMLPKDPKDNNNVFLEVRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE +K+K E + ++GE G K I G YG LK E GVHR+ R Sbjct: 129 FAGDLFRMYSRYAETKKWKVEVVTTNEGEHGGYKEVIANISGEGVYGQLKFESGVHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V V ++ IEI+ +D ++DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRVHTSACTVAVMAEVPEAEAIEINTADIKVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTGVVV+CQ ERSQHKN+A+A ++L A+L + E +KR A + +G G Sbjct: 249 THLPTGVVVECQDERSQHKNRAKAMSVLAARLQQAEDEKR--HAAEASERRNLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ ++V+ GDL ++ + + Sbjct: 307 ERIRTYNY-PQGRITDHRINLTLYRLNEVVAGDLGAVVEPLMQEHQ 351 >gi|212213424|ref|YP_002304360.1| peptide chain release factor 1 [Coxiella burnetii CbuG_Q212] gi|238058711|sp|B6J390|RF1_COXB2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|212011834|gb|ACJ19215.1| bacterial peptide chain release factor 1 [Coxiella burnetii CbuG_Q212] Length = 361 Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 111/343 (32%), Positives = 175/343 (51%), Gaps = 9/343 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72 R S + D + + + L +E L+ + ++ Q + + Sbjct: 9 LKTLTYRYSEIGGLLSDSTVINDQDRYRELGKEYAQLEPIVKCFQQFQQNEKAIESAEEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + E +E + + + + + D + +LE+ AG GG E+ Sbjct: 69 QQEKDPELRKLAEEELEQLTLKKEELEDQLKLLLVPKDPNDELNVFLEIRAGTGGNEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY R+AE + ++ + H+GE G K + G Y LK E G HR+ R Sbjct: 129 FAGDLFRMYARYAETKGWRVNIVSAHEGEHGGFKEVIARVIGEGVYSQLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ + P VD+ +I+I+ ++ RIDT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPVTESQGRIHTSACTVAIMPEVDEIDQIKINPAELRIDTFRASGAGGQHVNRTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTGVVV+CQ ERSQHKNKA+A ++L++KL E K+++ K+ +G G Sbjct: 249 THLPTGVVVECQDERSQHKNKARAMSLLQSKLLAAERAKQDQEQ--AAKRKSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ +V++GDLD + + Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYQLDEVIEGDLDPVIGPLIR 348 >gi|291517989|emb|CBK73210.1| bacterial peptide chain release factor 2 (bRF-2) [Butyrivibrio fibrisolvens 16/4] Length = 338 Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 148/324 (45%), Positives = 211/324 (65%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P W + + M+E + + + ++ I +++D + +EL EE+D I+ + Sbjct: 1 MEAPDFWTDAQVSTAKMKELKSMKDDVAVIDKLEDLYKEIEDYIELGNEEEDQEIVDTVA 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + ++E + ++LLSGE DS+ A + +H+GAGG E+ DW ML RMY+RWA Sbjct: 61 LLIEEFENDLESLRMKTLLSGEYDSDSAIVTLHSGAGGVEACDWVQMLYRMYSRWASDMG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F + L+ +G+EAGIKS T + G NAYG+LK E+G+HRLVRISP+++ +R TSF+S Sbjct: 121 FAVDELDYQEGDEAGIKSVTFQVNGDNAYGYLKSEKGIHRLVRISPFNAQGKRQTSFASC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ +++EI + D RIDTYR+SGAGGQH+N T SA+RITH PTG+VV CQ ERSQ Sbjct: 181 DVMPDIEEDVDVEIRDEDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVTCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +NK +A ML+ KL L+ ++ A+ +EIGWG QIRSYVLQPY MVKDLRT Sbjct: 241 FQNKDKAMQMLKTKLLLLKQEENAAKASGIRGEVSEIGWGNQIRSYVLQPYTMVKDLRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + VLDG L FM A L Sbjct: 301 EESGNADAVLDGKLTPFMNAYLKW 324 >gi|219856616|ref|YP_002473738.1| hypothetical protein CKR_3273 [Clostridium kluyveri NBRC 12016] gi|219570340|dbj|BAH08324.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 367 Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 119/363 (32%), Positives = 198/363 (54%), Gaps = 14/363 (3%) Query: 1 MKLSRQLNCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59 MK+ + + + + + + + L+ K DP + + + + L +E L+ + Sbjct: 1 MKILIRSDKI--MLERLNFIENKYEELSIKISDPTIIADQKKWQKLCKEHAELEEIVMKY 58 Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNLQR----IKLEVEYKQFESLLSGEADSN 115 +E ++ L D E+ EE D + + + ++R I+ + + L D Sbjct: 59 REYKEALQDLEDNKEMLREETDKDMREMEQEEIKRLGDIIEKREDELKILLLPKDPNDDK 118 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 + ++E+ GAGG E+ +A L RMYTR+AE + +K E + + + G K ++KG Sbjct: 119 NVFVEIRGGAGGEEAALFAANLTRMYTRYAEIKGWKVETISLSATDIGGFKEIVFMVKGK 178 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 +AY LK E G HR+ R+ +S+ R HTS +++ V P D ++I ++++D RID +RA Sbjct: 179 DAYSRLKYESGTHRVQRVPDTESSGRIHTSTATVAVLP-EVDDVDIVVNQNDIRIDVFRA 237 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ KNK +A +L+++LYE ++R Sbjct: 238 SGHGGQCVNTTDSAVRITHLPTGLVVSCQDEKSQLKNKEKAMKVLKSRLYEKAQEERN-- 295 Query: 296 ANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 A+I E K ++G G +IR+Y P V D R + L+GD+D+ + A + Sbjct: 296 ASIAEDRKNQVGTGDRSERIRTYNY-PQGRVTDHRIGMTLYKLDSFLNGDIDEIIDALIT 354 Query: 353 IKK 355 + Sbjct: 355 EDQ 357 >gi|194099102|ref|YP_002002187.1| peptide chain release factor 1 [Neisseria gonorrhoeae NCCP11945] gi|239999408|ref|ZP_04719332.1| peptide chain release factor 1 [Neisseria gonorrhoeae 35/02] gi|240014585|ref|ZP_04721498.1| peptide chain release factor 1 [Neisseria gonorrhoeae DGI18] gi|240081334|ref|ZP_04725877.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA19] gi|240113543|ref|ZP_04728033.1| peptide chain release factor 1 [Neisseria gonorrhoeae MS11] gi|240116107|ref|ZP_04730169.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID18] gi|240121107|ref|ZP_04734069.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID24-1] gi|240123936|ref|ZP_04736892.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID332] gi|240126136|ref|ZP_04739022.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-92-679] gi|240128613|ref|ZP_04741274.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-93-1035] gi|254494127|ref|ZP_05107298.1| peptide chain release factor 1 [Neisseria gonorrhoeae 1291] gi|260440083|ref|ZP_05793899.1| peptide chain release factor 1 [Neisseria gonorrhoeae DGI2] gi|268595228|ref|ZP_06129395.1| peptide chain release factor 1 [Neisseria gonorrhoeae 35/02] gi|268597436|ref|ZP_06131603.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA19] gi|268599608|ref|ZP_06133775.1| peptide chain release factor 1 [Neisseria gonorrhoeae MS11] gi|268601773|ref|ZP_06135940.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID18] gi|268682561|ref|ZP_06149423.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID332] gi|268684722|ref|ZP_06151584.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-92-679] gi|268687001|ref|ZP_06153863.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-93-1035] gi|291043371|ref|ZP_06569094.1| peptide chain release factor 1 [Neisseria gonorrhoeae DGI2] gi|238690206|sp|B4RN52|RF1_NEIG2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|193934392|gb|ACF30216.1| peptide chain release factor 1 [Neisseria gonorrhoeae NCCP11945] gi|226513167|gb|EEH62512.1| peptide chain release factor 1 [Neisseria gonorrhoeae 1291] gi|268548617|gb|EEZ44035.1| peptide chain release factor 1 [Neisseria gonorrhoeae 35/02] gi|268551224|gb|EEZ46243.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA19] gi|268583739|gb|EEZ48415.1| peptide chain release factor 1 [Neisseria gonorrhoeae MS11] gi|268585904|gb|EEZ50580.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID18] gi|268622845|gb|EEZ55245.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID332] gi|268625006|gb|EEZ57406.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-92-679] gi|268627285|gb|EEZ59685.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-93-1035] gi|291012977|gb|EFE04960.1| peptide chain release factor 1 [Neisseria gonorrhoeae DGI2] gi|317164656|gb|ADV08197.1| peptide chain release factor 1 [Neisseria gonorrhoeae TCDC-NG08107] Length = 358 Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 119/349 (34%), Positives = 174/349 (49%), Gaps = 8/349 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + RL + P ++ + L RE L + + + D Sbjct: 4 SILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQSDLA 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E+ + + E + + Q L D + ++E+ AG GG E Sbjct: 64 DAEEMLSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEIRAGTGGGE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY+R+AE+ +++ E + ++ E G K I G AY LK E G HR Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ V P D+ +IE++ +D R DT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRTDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREVQAKEAAERKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGDL + A +A + Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQ 349 >gi|289425462|ref|ZP_06427239.1| peptide chain release factor 2 [Propionibacterium acnes SK187] gi|289154440|gb|EFD03128.1| peptide chain release factor 2 [Propionibacterium acnes SK187] gi|313771879|gb|EFS37845.1| peptide chain release factor 2 [Propionibacterium acnes HL074PA1] gi|313807112|gb|EFS45607.1| peptide chain release factor 2 [Propionibacterium acnes HL087PA2] gi|313809604|gb|EFS47340.1| peptide chain release factor 2 [Propionibacterium acnes HL083PA1] gi|313813321|gb|EFS51035.1| peptide chain release factor 2 [Propionibacterium acnes HL025PA1] gi|313819308|gb|EFS57022.1| peptide chain release factor 2 [Propionibacterium acnes HL046PA2] gi|313819957|gb|EFS57671.1| peptide chain release factor 2 [Propionibacterium acnes HL036PA1] gi|313823250|gb|EFS60964.1| peptide chain release factor 2 [Propionibacterium acnes HL036PA2] gi|313824962|gb|EFS62676.1| peptide chain release factor 2 [Propionibacterium acnes HL063PA1] gi|313829923|gb|EFS67637.1| peptide chain release factor 2 [Propionibacterium acnes HL007PA1] gi|313833072|gb|EFS70786.1| peptide chain release factor 2 [Propionibacterium acnes HL056PA1] gi|314924796|gb|EFS88627.1| peptide chain release factor 2 [Propionibacterium acnes HL036PA3] gi|314960646|gb|EFT04748.1| peptide chain release factor 2 [Propionibacterium acnes HL002PA2] gi|314972908|gb|EFT17005.1| peptide chain release factor 2 [Propionibacterium acnes HL053PA1] gi|314975668|gb|EFT19763.1| peptide chain release factor 2 [Propionibacterium acnes HL045PA1] gi|314978052|gb|EFT22146.1| peptide chain release factor 2 [Propionibacterium acnes HL072PA2] gi|314984148|gb|EFT28240.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA1] gi|314989571|gb|EFT33662.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA3] gi|315080944|gb|EFT52920.1| peptide chain release factor 2 [Propionibacterium acnes HL078PA1] gi|315084867|gb|EFT56843.1| peptide chain release factor 2 [Propionibacterium acnes HL027PA2] gi|315086040|gb|EFT58016.1| peptide chain release factor 2 [Propionibacterium acnes HL002PA3] gi|315088241|gb|EFT60217.1| peptide chain release factor 2 [Propionibacterium acnes HL072PA1] gi|315095727|gb|EFT67703.1| peptide chain release factor 2 [Propionibacterium acnes HL038PA1] gi|315105991|gb|EFT77967.1| peptide chain release factor 2 [Propionibacterium acnes HL030PA1] gi|327327935|gb|EGE69709.1| peptide chain release factor 2 [Propionibacterium acnes HL096PA3] gi|327330072|gb|EGE71825.1| peptide chain release factor 2 [Propionibacterium acnes HL096PA2] gi|327442693|gb|EGE89347.1| peptide chain release factor 2 [Propionibacterium acnes HL043PA1] gi|327443908|gb|EGE90562.1| peptide chain release factor 2 [Propionibacterium acnes HL043PA2] gi|327443976|gb|EGE90630.1| peptide chain release factor 2 [Propionibacterium acnes HL013PA2] gi|328754956|gb|EGF68572.1| peptide chain release factor 2 [Propionibacterium acnes HL020PA1] gi|328761406|gb|EGF74932.1| peptide chain release factor 2 [Propionibacterium acnes HL099PA1] Length = 371 Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 153/353 (43%), Positives = 221/353 (62%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L+ + + D + ++ L + P+LW + A+ + L I ++ + Sbjct: 16 LDASLSSIENVLDPEAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +LLE A +DD L E + +++ E++ + +LLSG+ D +A + + Sbjct: 76 RARIEDVHVLLEFAAADDDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A MLLRMY RW+E+ +K E L+ EEAGIKSAT ++ P AYG L Sbjct: 136 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ ++I ESD R+D + ASG GGQ Sbjct: 196 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A +L+AKL E +++E N +S Sbjct: 256 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSE 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRTN E + V DGD+DDF+ A + ++ Sbjct: 316 GN--SWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 366 >gi|238022362|ref|ZP_04602788.1| hypothetical protein GCWU000324_02269 [Kingella oralis ATCC 51147] gi|237866976|gb|EEP68018.1| hypothetical protein GCWU000324_02269 [Kingella oralis ATCC 51147] Length = 358 Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 120/344 (34%), Positives = 174/344 (50%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 N RL + P N+ + L +E L + D E+ Sbjct: 9 LQNLSHRLEEVTALLGSPEATANMDSYRRLNQEHAELTPIVDTYHAYTQAQSDLADAQEM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + E I+ Q L D + ++E+ AG GG E+ +A Sbjct: 69 LSDPEMKDFAFEEIQAAKDTIERLDLELQKLLLPKDADDDKNIFIEIRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE+ +++TE + + + G K + + G AY LK E G HR+ R+ Sbjct: 129 GDLLRMYTRYAERNRWQTEIVSASESDLGGYKEVIVRLVGLGAYSKLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P D+ +IE+++ D RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 189 ATESQGRIHTSACTVAVMPEADELAKIELNDKDLRIDTFRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ RSQH NK +A +L A+L ++ QKRE A K+ IG G + Sbjct: 249 LPTGLVVECQDGRSQHTNKEKALKVLAARLNDI--QKREAHAKEAAERKSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ V+DGD+D+ A +A + Sbjct: 307 IRTYNY-PQGRVTDHRINLTLHKLDFVMDGDMDEITSALIAEHQ 349 >gi|314986213|gb|EFT30305.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA2] Length = 371 Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 153/353 (43%), Positives = 221/353 (62%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L+ + + D + ++ L + P+LW + A+ + L I ++ + Sbjct: 16 LDASLSSIENVLDPEAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +LLE A +DD L E + +++ E++ + +LLSG+ D +A + + Sbjct: 76 RARIEDVHVLLEFAAADDDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A MLLRMY RW+E+ +K E L+ EEAGIKSAT ++ P AYG L Sbjct: 136 SEAGGVDASDFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ ++I ESD R+D + ASG GGQ Sbjct: 196 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A +L+AKL E +++E N +S Sbjct: 256 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSE 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRTN E + V DGD+DDF+ A + ++ Sbjct: 316 GN--SWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 366 >gi|238917365|ref|YP_002930882.1| peptide chain release factor RF-1 [Eubacterium eligens ATCC 27750] gi|259585239|sp|C4Z1S4|RF1_EUBE2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238872725|gb|ACR72435.1| peptide chain release factor RF-1 [Eubacterium eligens ATCC 27750] Length = 357 Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 123/351 (35%), Positives = 185/351 (52%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ V R + + +P + + + K LM+E+ L I E ++ + Sbjct: 1 MFDRLEDTVNRYEDITAELGNPDVVNDQEKFKKLMKEQSSLAPLIETYTEYKNCKKNIED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127 L + EE D + + + L K VE + E D D +E+ AGAGG Sbjct: 61 SLAILDEETDEELKEMAKEELNESKARVEELEHELKILLLPKDPNDDKDIVVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY +A+ R +K E L + G+K ++KG AY +K E GV Sbjct: 121 EEAALFAAELFRMYVHYAQARGWKVEVLSGDETGIGGMKEVEFMVKGQGAYSIMKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +SN R TS +S+ V P + ++I I E D RID RASG GGQ VNTTD Sbjct: 181 HRVQRIPVTESNGRIQTSTASVAVMP-EAEEVDIHIDEKDIRIDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+V+ Q E+SQ +NK +A+ +LRAKLY++E QK ++ +++IG Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQIQNKEKAFALLRAKLYDIETQK--AHDAEADARRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + ++DGD+ D + A +A + Sbjct: 298 TGDRAEKIRTYNF-PQGRVTDHRIGLTLYKLDKIMDGDIQDIIDACIAADQ 347 >gi|288575018|ref|ZP_06393375.1| peptide chain release factor 2 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570759|gb|EFC92316.1| peptide chain release factor 2 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 336 Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats. Identities = 161/330 (48%), Positives = 212/330 (64%), Gaps = 2/330 (0%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L+ P W +A+ + + L++ IS + D ++L EL EEDD + Sbjct: 8 LHEIMALPDFWG-RDDAQRISTDLARLESRISSWDRMSSEYQDLVVLAELLDEEDDQELE 66 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E + + ++ E LL+G+ D N+A + VHAG+GG +SQDWA ML RMY RW Sbjct: 67 AEFFSRSESLSKSMDAFSMELLLNGDYDGNNAIMTVHAGSGGLDSQDWAEMLYRMYLRWC 126 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E +KT+ L+ EE GIK+ TLL++G AYG+L+ E GVHRLVRISP+D+ RRHTS Sbjct: 127 ESNHYKTKILDYQRDEEGGIKTVTLLVEGDFAYGYLQSEVGVHRLVRISPFDTAKRRHTS 186 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 F+S+ V P + D +E++I D RIDT+RASGAGGQHVN TDSAVRITHIPTG+VV CQ Sbjct: 187 FASVDVAPELPDDVEVDIRTEDLRIDTFRASGAGGQHVNMTDSAVRITHIPTGIVVSCQN 246 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325 ERSQH NKA A +LR KLYE + +R++ + K EI WG QIRSYVL PY MVKD Sbjct: 247 ERSQHMNKAVAMQVLRGKLYERSMSERQDTLDSLHD-KKEISWGNQIRSYVLHPYTMVKD 305 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 RT E + + VLDGDL+ F+ + L +K Sbjct: 306 HRTGEETGNAAAVLDGDLERFILSYLRWRK 335 >gi|291167022|gb|EFE29068.1| peptide chain release factor 2 [Filifactor alocis ATCC 35896] Length = 338 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 152/337 (45%), Positives = 217/337 (64%), Gaps = 2/337 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 Q + K ED W N+ ++ +++ + L+ + L + IL EL Sbjct: 1 MKQEKQQNDLKMEDADFWNNLELSQHIVKRNKELERTLDIYSSAFSELEEVEILFELTK- 59 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 +D + +E + + ++E + ++LL GE D N+A L +HAG+GG ++QDWA MLL Sbjct: 60 -EDSELEKELEQCINELSEKMEQLKIQTLLDGEYDGNNAILSIHAGSGGLDAQDWAQMLL 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY R+ ++ L+ EAGIKS TL I+GPNAYG+LK E+GVHR+VRISP+DS Sbjct: 119 RMYLRFCHDMGYRVIELDSLSDSEAGIKSVTLQIEGPNAYGFLKSEKGVHRIVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 + +RHTSF+S+ V P +DD++E++I +D +IDTYRASGAGGQHVN TDSAVRITHIPTG Sbjct: 179 SGKRHTSFTSVDVIPEMDDTVEVDIDTNDLKIDTYRASGAGGQHVNKTDSAVRITHIPTG 238 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +V+ CQ ERSQH N+ A ML +KL ++++++ +E ++I WG QIRSYV Q Sbjct: 239 IVITCQNERSQHSNRETAMKMLFSKLMDIKIREHKEKIEDISGEYSQIAWGSQIRSYVFQ 298 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 PY +VKD RTN E S V+DG++ F+ A L +K Sbjct: 299 PYTLVKDHRTNHEIGSVQSVMDGNIMPFINAYLKQQK 335 >gi|238752991|ref|ZP_04614450.1| Peptide chain release factor 2 [Yersinia rohdei ATCC 43380] gi|238708779|gb|EEQ01038.1| Peptide chain release factor 2 [Yersinia rohdei ATCC 43380] Length = 310 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 172/308 (55%), Positives = 217/308 (70%), Gaps = 1/308 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 +ER L+ ++ I ++ + D LLELA+E DD E L + ++ +F Sbjct: 2 GKERSALEEIVTTIDQLDQGMEDVSGLLELAIEADDEETFNEAIAELDILDGKLGQLEFR 61 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 + SGE DS + YL++ AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E DG+ AGI Sbjct: 62 RMFSGEYDSANCYLDLQAGSGGTEAQDWASMLLRMYLRWAEARGFKTEIIEESDGDVAGI 121 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G A+GWL+ E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ Sbjct: 122 KSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINP 181 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLY Sbjct: 182 ADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLY 241 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E E+QK+ + E +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD Sbjct: 242 EFEMQKKNADKQVLEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDK 300 Query: 346 FMKATLAI 353 F++A+L Sbjct: 301 FIEASLKA 308 >gi|296134391|ref|YP_003641638.1| peptide chain release factor 1 [Thermincola sp. JR] gi|296032969|gb|ADG83737.1| peptide chain release factor 1 [Thermincola potens JR] Length = 355 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 112/347 (32%), Positives = 180/347 (51%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++ L+ DP + + + + + L +S +E + L EL Sbjct: 5 LQSLEEKYEELSKLIADPEIIADQSQWQRHAKAHAALTEIVSTYREYKSVLKGIDEAKEL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ++ D + L +K + E + L D + +E+ GAGG E+ Sbjct: 65 LKDQLDSEFREMVEQELAELKEKEEKLSVQLKILLLPKDPNDEKNVIMEIRGGAGGEEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AE + +KTE L + + G K LI+G AY LK E GVHR+ Sbjct: 125 LFAGDLFRMYSRYAEAKGWKTEILSSNPTDIGGFKEIIFLIEGQGAYSRLKFESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S+ R HTS ++ V P + ++++I +D RID + +SG GGQ VNTT SAVR Sbjct: 185 RVPTTESSGRIHTSTVTVAVLP-EAEEVDVDIDPNDLRIDVFCSSGPGGQSVNTTQSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTG+VV CQ E+SQHKNK +A +LRA+L + +++ + + K+++G G Sbjct: 244 VTHIPTGIVVSCQDEKSQHKNKEKALRVLRARLLDKAQEEQR--NQLASTRKSQVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + VL+GDLD+ ++A + + Sbjct: 302 SERIRTYNF-PQGRVTDHRIGLTLHKLDMVLEGDLDEIIEALITTDQ 347 >gi|297543676|ref|YP_003675978.1| peptide chain release factor 1 [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841451|gb|ADH59967.1| peptide chain release factor 1 [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 356 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 121/346 (34%), Positives = 192/346 (55%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72 R L+ K DP++ NV E + ++E ++ + +E + + D L Sbjct: 5 LQAIEDRYVELSQKISDPNIISNVGEWRKYVKEHAAIEEIVLKYREYKKVVEDINSTKEL 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L +E +E S ++ + +E + + D + +E+ AGAGG E+ Sbjct: 65 LSSDEKELREMAEEELSHLEEKKEELLEEIKILLIPKDPNDEKNVIMEIRAGAGGEEAAL 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A+ L RMY+ +AEK+ +K E + ++ + G K L I G AY LK E GVHR+ R Sbjct: 125 FAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGAYSRLKYESGVHRVQR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ V P + +++EI+ +D RID +R+ G GGQ VNTTDSAVR+ Sbjct: 185 VPTTEAGGRIHTSTATVAVLP-EVEEVDVEINPNDIRIDVFRSGGHGGQSVNTTDSAVRV 243 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV CQ ERSQ +N+ +A +LRAKLYE+ LQ++++ I E K+++G G Sbjct: 244 THIPTGIVVTCQDERSQLQNRERALKILRAKLYEMALQEQQKE--IAEVRKSQVGTGERS 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +VLDGDLD+ + A + + Sbjct: 302 ERIRTYNF-PQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALILNDQ 346 >gi|323486285|ref|ZP_08091611.1| hypothetical protein HMPREF9474_03362 [Clostridium symbiosum WAL-14163] gi|323693924|ref|ZP_08108111.1| peptide chain release factor 1 [Clostridium symbiosum WAL-14673] gi|323400395|gb|EGA92767.1| hypothetical protein HMPREF9474_03362 [Clostridium symbiosum WAL-14163] gi|323502021|gb|EGB17896.1| peptide chain release factor 1 [Clostridium symbiosum WAL-14673] Length = 357 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 117/351 (33%), Positives = 187/351 (53%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D+ + R L + P + + + LM+E+ L + KE + D Sbjct: 1 MFDRLDDLLIRYEELLEELNSPDVAMDQNRFRKLMKEQADLTPLVDAYKEYKKANQDVED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 L L EE D + + L K +E + L D + +E+ AGAGG Sbjct: 61 SLALLEEESDEEMRDMAKEELADAKKRIEEMEQQLKILLLPKDPNDDKNVMVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A+ L RMY +AE ++KTE + +++ G K ++ G AY +K E GV Sbjct: 121 DEAALFASELYRMYVHFAESNRWKTELVSVNENGIGGFKEVVFMVTGQGAYSKMKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +S+ V P ++ + I + D RID RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTASVAVMPEAEEFDVV-IDDKDIRIDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+V+ Q E+SQ +NK +A+ +LR+KLY++EL+KR+ E +++IG Sbjct: 240 SAVRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDMELEKRQ--NQEAEERRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V + R + V++G+L++ + + +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTEHRIKLTLYKIDSVMNGELNELIDSLIAADQ 347 >gi|166031017|ref|ZP_02233846.1| hypothetical protein DORFOR_00698 [Dorea formicigenerans ATCC 27755] gi|166029284|gb|EDR48041.1| hypothetical protein DORFOR_00698 [Dorea formicigenerans ATCC 27755] Length = 318 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 154/308 (50%), Positives = 210/308 (68%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+E + L + I + D L+E+ EE+D S+++E ++ + + E + E Sbjct: 1 MKELKDLQEHLKVIHALYSEYDDICTLIEMVDEEEDRSMVKEIEKDIAHFEEDFEKLRIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGE DS +A + +HAG GGTE+ DW NML RMYTRW + + F + L+ DG+ GI Sbjct: 61 TLLSGEYDSCNAIMTLHAGTGGTEACDWVNMLYRMYTRWFQTKGFSVQVLDYLDGDITGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ T + G NAYG+LK E+GVHRLVRISP++S +R TSF+S V P +++ I+I+I E Sbjct: 121 KNITFEVVGDNAYGYLKSEKGVHRLVRISPFNSAGKRQTSFASCDVVPDIEEDIDIDILE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D +IDTYRASGAGGQHVN T SA+RITH+PTG+VVQCQ ERSQH NK +A ML+AKL Sbjct: 181 DDLKIDTYRASGAGGQHVNKTSSAIRITHLPTGIVVQCQNERSQHHNKEKAMQMLKAKLK 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 L+ Q++ E + +IG+G QIRSYV+QPY +VKD RTN+E + + VLDGDLD Sbjct: 241 LLQEQEQAEKVSDIRGEVKDIGFGNQIRSYVMQPYTLVKDHRTNVENGNVTAVLDGDLDM 300 Query: 346 FMKATLAI 353 F+ A L Sbjct: 301 FINAYLKY 308 >gi|169333846|ref|ZP_02861039.1| hypothetical protein ANASTE_00232 [Anaerofustis stercorihominis DSM 17244] gi|169259411|gb|EDS73377.1| hypothetical protein ANASTE_00232 [Anaerofustis stercorihominis DSM 17244] Length = 355 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 122/351 (34%), Positives = 192/351 (54%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + +R + ++ +P + N L++E HL+ + K+ D + Sbjct: 1 MLDKLKSIEKRFNEVSEDISNPDIINNHELYTELIKEHSHLEPIVIAYKKYADVMEQLES 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 E+ + DD + +++ + + E + + D + +E+ AG GG Sbjct: 61 NKEMLNDSDDDDFKEMILEDISSLNEQKEGLEQEIKILLIPKDPNDDKNVIVEIRAGVGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A LLRMYTR+AE+ ++K E L ++ G K A I+G AY LK E G Sbjct: 121 DEAALFAGDLLRMYTRYAERNRWKVEMLSTNEIGIGGYKEAVFSIQGKGAYSRLKYESGT 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +S+ R HTS ++ V P + +E+ I +D RID YR+SG GGQ VNTTD Sbjct: 181 HRVQRIPDTESSGRIHTSAITVAVLP-EAEDVEVNIDPNDLRIDVYRSSGNGGQSVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIP+G+VV CQ E+SQ KNK +A +L+A+L+E+E +K++E I + K++IG Sbjct: 240 SAVRITHIPSGLVVACQDEKSQLKNKDKALKILKARLFEIEQRKQQE--AIASNRKSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +DVLDGD+D+F+ + + Sbjct: 298 SGDRSERIRTYNF-PQGRVTDHRVGLTLYKLNDVLDGDIDEFIDTLIVQDQ 347 >gi|91976917|ref|YP_569576.1| peptide chain release factor 2 [Rhodopseudomonas palustris BisB5] gi|91683373|gb|ABE39675.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodopseudomonas palustris BisB5] Length = 322 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 201/309 (65%), Positives = 251/309 (81%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L++A++ I +++ L DN+ ++EL E D ++ E L+ +K EV ++ E Sbjct: 1 MQERTSLEDALTGIGKVERELTDNVEMIELGEAEGDDGVVSEAEAALKALKKEVARRELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D+YLEVHAGAGGTESQDWA+MLLRMYTRWAEK FK E LE +GEEAGI Sbjct: 61 ALLSGEADRFDSYLEVHAGAGGTESQDWASMLLRMYTRWAEKHGFKIEYLEESEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PV+D+SI+I+I+E Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDNSIKIDIAE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ RSQHKN+AQAW+MLRA+LY Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KREE A +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ + + VLDGDLD+ Sbjct: 241 EIELKKREEQAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300 Query: 346 FMKATLAIK 354 FM ATLA + Sbjct: 301 FMAATLAQR 309 >gi|225027777|ref|ZP_03716969.1| hypothetical protein EUBHAL_02036 [Eubacterium hallii DSM 3353] gi|224954923|gb|EEG36132.1| hypothetical protein EUBHAL_02036 [Eubacterium hallii DSM 3353] Length = 359 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 122/351 (34%), Positives = 192/351 (54%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ V+RL + + +P + + + LM+E+ L + KE ++ Sbjct: 1 MFDKLEDLVKRLDEVMQELSEPDVVSDQNRFRNLMKEQNELAPIVEKYKEYKEAKQTIED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127 +E+ EE D + + + L K VE + E D + +E+ AGAGG Sbjct: 61 SVEMLEEEHDEEMRELLKEELSEAKKNVEQYEEELKVLLLPKDPNDDKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY +AE +++KTE +++++ G K + +I G AY LK E GV Sbjct: 121 DEAALFAAEIYRMYKNYAESKRWKTEFIDVNENGIGGFKEVSFMINGQGAYSRLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +S R HTS ++ + P + +++++ +DCR D +RASG GGQ VNTTD Sbjct: 181 HRVQRIPATESGGRIHTSTITVAIMP-EAEEVDVQLDMNDCRFDVFRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V+ CQ E+SQ KNK +A +LRA+LY+LE K E K++IG Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKAIKVLRARLYDLEQSK--AHDAEAELRKSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + D+L+GDLD+ + + A + Sbjct: 298 TGDRAEKIRTYNF-PQGRVTDHRIKLTLHRLDDILNGDLDEIIDSLTAADQ 347 >gi|300853434|ref|YP_003778418.1| peptide chain release factor 1 [Clostridium ljungdahlii DSM 13528] gi|300433549|gb|ADK13316.1| peptide chain release factor 1 (RF-1) [Clostridium ljungdahlii DSM 13528] Length = 357 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 116/347 (33%), Positives = 189/347 (54%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L+ K DP + + E + L +E L+ ++ +E + + E+ Sbjct: 5 LNFIENKYEELSIKISDPQVMADQKEWQKLCKENAELEEIVTKYREYKKAQQELEDNKEM 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 EE D + + + ++R+ +E + L D + ++E+ AGAGG E+ Sbjct: 65 LKEETDREMKEMEQEEIKRLTEVIEESENDLRVLLLPKDPNDDKNVFVEIRAGAGGEEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYTR+AE++ + E + I+ + G K ++KG AY LK E G HR+ Sbjct: 125 LFAANLTRMYTRYAERQAWNIETMSINATDIGGFKEIVFMVKGKGAYSRLKYESGTHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S+ R HTS +++ V P D +++ I+ +D RID +RASG GGQ VNTTDSAVR Sbjct: 185 RVPDTESSGRIHTSTATVAVLP-EVDDVDVVINPNDIRIDVFRASGHGGQCVNTTDSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV CQ E+SQ KNK + +L+++LY E ++E A+I E K+++G G Sbjct: 244 ITHLPTGLVVSCQDEKSQLKNKEKGMKVLKSRLY--ERAEKERSASIAEDRKSQVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + LDG++D+ + A + + Sbjct: 302 SERIRTYNY-PQGRVTDHRIGLTLYKLDSFLDGNIDEIIDALITADQ 347 >gi|298706071|emb|CBJ29181.1| peptide chain release factor [Ectocarpus siliculosus] Length = 789 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 124/356 (34%), Positives = 195/356 (54%), Gaps = 7/356 (1%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 +L LFD L +L + + W + A+ + + L + + + Sbjct: 98 RERLGKNRQLFDEAKLEGELEYLEGVSSEAEFWNDANSARKTLGDLNRLKLQLDRLHRWR 157 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAY 118 D ++EL EE+ + + +++ + + LLSG+ D+ Sbjct: 158 GWEADAETVIELCGEEEGGDEETVAMLDEAMEALQLLQRDLDAWELQQLLSGKYDNCGCR 217 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 L + AGAGGTE+QDWA ML RMY R+ ++R FK + +E GE AGIKS + ++G AY Sbjct: 218 LTIMAGAGGTEAQDWAEMLQRMYIRFFQRRGFKYKMVEEESGEVAGIKSCEMQVEGDFAY 277 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI--EIEISESDCRIDTYRAS 236 G+L GE+G HRLVR SP+++ ++R TSF+ + +P+++ ++ + E + + T R+ Sbjct: 278 GYLAGEKGTHRLVRQSPFNAQAKRQTSFAGVESFPIIEQDDLSDLVVPEGELEVSTMRSG 337 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G+GGQ+VN ++ VR+ HIPTG+ V+C QERSQ NK A NML+ KL + +++ Sbjct: 338 GSGGQNVNKVETGVRMKHIPTGIAVRCTQERSQMLNKELALNMLKEKLVVVMQEQQTRDL 397 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E WG+QIR+YV PY++VKD RT E DV+DGDLD ++A L Sbjct: 398 AEIRGDMVEASWGQQIRNYVFHPYKLVKDTRTGAETVQVQDVMDGDLDALIEAYLR 453 >gi|255280026|ref|ZP_05344581.1| peptide chain release factor 1 [Bryantella formatexigens DSM 14469] gi|255269117|gb|EET62322.1| peptide chain release factor 1 [Bryantella formatexigens DSM 14469] Length = 357 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 116/351 (33%), Positives = 185/351 (52%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ + R L + +P + + + LM+E+ +L + KE ++ Sbjct: 1 MFDKLEDLLIRFEELLNELNEPGVASDPAHFQKLMKEQGNLQPIVDAYKEYKECKKTVED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 L + E D + + + L K + + L D + +E+ AGAGG Sbjct: 61 SLAMLDGESDEEMREMLKEELNTAKDRIAELETELKILLLPKDPNDDKNVIMEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + R+Y ++AEKR+++ E L + G+K +I G AY LK E GV Sbjct: 121 DEAALFAAEMYRLYVKYAEKRRWRVELLNADEIGIGGMKEVNFMITGQGAYSRLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P + +++ I E D RID RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTVTVAVMP-EAEEVDVVIDEKDIRIDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+VV Q E+SQ +NKA+A+ +LRAKLY++E QK + +++IG Sbjct: 240 SAVRLTHYPTGIVVYSQTEKSQLQNKAKAFALLRAKLYDIEQQK--AHDAEAQLRRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + ++DGD+D+ + + +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLYKLDSIMDGDIDELLDSLIAADQ 347 >gi|254428729|ref|ZP_05042436.1| peptide chain release factor 1 [Alcanivorax sp. DG881] gi|196194898|gb|EDX89857.1| peptide chain release factor 1 [Alcanivorax sp. DG881] Length = 361 Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats. Identities = 120/346 (34%), Positives = 175/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L DP + N + + L RE +D + + + + Sbjct: 9 LDKLADRFEELAGLLSDPDVIGNQNQFRDLSREYAEIDPVVKCYQAYLQAADNLDAARAM 68 Query: 76 ALEEDDCSILQETSDNLQ---RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + R++ E Q L D + +LEV AG GG E+ Sbjct: 69 QDDSDPDMREMGAEEARDAQARMEELAEELQKLMLPKDPRDGANVFLEVRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++A++R +K E + +GE G K + G Y +K E G HR+ R Sbjct: 129 FAGDLFRMYSKYADQRGWKVEMVSASEGEHGGYKEVIARVIGDGVYSRMKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ + + +I I D RIDTYR+SGAGGQHVNTTDSAVRI Sbjct: 189 VPATESQGRIHTSACTVAIMAEAEQLGDITIRNEDLRIDTYRSSGAGGQHVNTTDSAVRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTGVVV+CQ ERSQHKNKA+A ++L AKLY+ Q+ A K+ +G G Sbjct: 249 THLPTGVVVECQDERSQHKNKARAMSLLSAKLYDA--QQNAAHAEQAAERKSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ ++++GD+D+ + A LA + Sbjct: 307 ERIRTYNY-PQGRVSDHRINLTLYRLGELMEGDMDELLGALLAEYQ 351 >gi|268592708|ref|ZP_06126929.1| peptide chain release factor 1 [Providencia rettgeri DSM 1131] gi|291311851|gb|EFE52304.1| peptide chain release factor 1 [Providencia rettgeri DSM 1131] Length = 360 Score = 236 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 116/340 (34%), Positives = 177/340 (52%), Gaps = 7/340 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L +E L + + D L Sbjct: 9 LEALQERYEEIEAHLADAGVIADQDRFRALSKEYAQLSDVAKCFSAWRTVQDDIETAEML 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE R + + Q L D + ++E+ AGAGG E+ +A Sbjct: 69 LDDPEMKEMAQEELKEAKARNEELEQQLQLLLLPKDPDDEYNCFVEIRAGAGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE +++ E + DGE G K I G + YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAENNRWRVELMSTSDGEHGGFKEVIAKISGDSVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P + ++ EIS +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAILPELPEAELPEISPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV+CQ ERSQHKNKA+A ++L A++ + E+ KR+ A + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLGARIRQAEMDKRQ--AAEASERRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IR+Y P V D R N+ +V++G LD ++ + Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDSLIQPII 345 >gi|167627296|ref|YP_001677796.1| peptide chain release factor 1 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|189039973|sp|B0TX37|RF1_FRAP2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|167597297|gb|ABZ87295.1| peptide chain release factor 1 [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 361 Score = 236 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 114/346 (32%), Positives = 184/346 (53%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R ++ + ++ + + + L +E HL+ + KE L D E+ Sbjct: 9 LQSLIERHEEVSALLGEANVISDQNKFRDLSKEYSHLEPIVMAFKEYTQALEDKEAAYEM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + + + Q L D + +LE+ AG GG E+ Sbjct: 69 LNEKDAELVEMAKEELKSANESIERLEDELQILLLPRDPNDDANIFLEIRAGTGGDEASI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L +MY+++AE+R +K E + +GE G K I G Y LK E G HR+ R Sbjct: 129 FSGDLFKMYSKYAEQRGWKIEVVSASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ I+I+ +D ++DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++ ++ K +G G Sbjct: 249 THIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQ--SDTRKNLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +V++G LD ++ + + Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLILEHQ 351 >gi|261392089|emb|CAX49586.1| peptide chain release factor I (RF-1) [Neisseria meningitidis 8013] Length = 358 Score = 236 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 120/349 (34%), Positives = 174/349 (49%), Gaps = 8/349 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + RL + ++ + L RE L + + + D Sbjct: 4 SILEKLQQLGDRLEEVTHLLGQSEATADMDNYRKLTREHAELTPVVEVFQNYRLAQSDLA 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E+ + + E + + Q L D + ++EV AG GG E Sbjct: 64 DAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEVRAGTGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLRMY+R+AE+ +++ E + ++ E G K I G AY LK E G HR Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ V P D+ +IE++ +D RIDT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+DGDL + A +A + Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQ 349 >gi|86750123|ref|YP_486619.1| peptide chain release factor 2 [Rhodopseudomonas palustris HaA2] gi|86573151|gb|ABD07708.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodopseudomonas palustris HaA2] Length = 322 Score = 236 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 199/309 (64%), Positives = 251/309 (81%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L+++++ I +++ L DN+ ++EL E D +++E L+ +K EV ++ E Sbjct: 1 MQERTSLEDSLTGIGKVERELSDNIEMIELGEAEGDEGVVREAEAALKALKKEVARRELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D YLEVHAGAGGTESQDWA+MLLRMYTRWAEK FK E LE +GEEAGI Sbjct: 61 ALLSGEADRFDTYLEVHAGAGGTESQDWASMLLRMYTRWAEKHGFKVEYLEESEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PV+D+SI+I+I+E Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDNSIKIDIAE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R+DT R+ GAGGQHVN T+SAVR+TH+PTGV V CQ RSQHKN+AQAW+MLRA+LY Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHVPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KREE A +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ + + VLDGDLD+ Sbjct: 241 EIELKKREEQAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300 Query: 346 FMKATLAIK 354 FM ATLA + Sbjct: 301 FMAATLAQR 309 >gi|325860237|ref|ZP_08173362.1| putative peptide chain release factor 2 [Prevotella denticola CRIS 18C-A] gi|325482324|gb|EGC85332.1| putative peptide chain release factor 2 [Prevotella denticola CRIS 18C-A] Length = 371 Score = 236 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 124/359 (34%), Positives = 204/359 (56%), Gaps = 12/359 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + + L D D +T+ P W + A+ M++ + ++ I E Sbjct: 10 IQVRTDALHRYLDIDRKRIEFEEEQLRTQAPDFWDDPKRAQEQMKKVKDIEKWIKGYDEA 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + + D+ +E + +E + +++L E D + ++++ Sbjct: 70 RSLTEETQLAFDFYK--DELVTEEEVDAAYAKALKVIEDLELKNMLRQEEDPMECVMKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWL 181 +GAGGTESQDWA+ML+RMY RW E +K +I +G+EAGIKS T+ + G AYG+L Sbjct: 128 SGAGGTESQDWASMLMRMYMRWGEAHGYKVTVSDIQEGDEAGIKSVTMKFEGGEYAYGYL 187 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVR+SP+++ +R TSF+S++V P+VDD+IE+ + + DT+R+SGAGGQ Sbjct: 188 KSENGVHRLVRVSPFNAQGKRMTSFASVFVTPLVDDTIEVYVDPARVSWDTFRSSGAGGQ 247 Query: 242 HVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 +VN +S VR+ + ++++ + R Q KN+A+A +L+++LY+ ++KR Sbjct: 248 NVNKVESGVRLRYQYEDPDTGEQEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRI 307 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E E+ K +I WG QIRSYV + VKD RTN + + V+DG +D F+KA L Sbjct: 308 EEQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKIDAFIKAYLM 365 >gi|313896150|ref|ZP_07829704.1| peptide chain release factor 1 [Selenomonas sp. oral taxon 137 str. F0430] gi|312975575|gb|EFR41036.1| peptide chain release factor 1 [Selenomonas sp. oral taxon 137 str. F0430] Length = 354 Score = 236 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 110/346 (31%), Positives = 177/346 (51%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---DNLIL 72 + L DP + ++ + RE L ++ + + ++ + Sbjct: 5 LTAVADKYRELEALLSDPAVMADMARWQRYTREHAALTPIVTAYEAYRKAEETVAEDKEM 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L A E +L+E + + E L D + +E+ G GG E+ Sbjct: 65 LAEADAEMKELLLEEIAAAEAERERLAEELPILLLPRDPNDDKNVIVEIRGGVGGEEAAL 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY R+AE++ ++TE L ++ E G K + L+ G AY LK E G HR+ R Sbjct: 125 FAASLFRMYARYAERQGWRTEILSSNETEIGGFKEISFLVTGAGAYSKLKYESGTHRVQR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 I +S R HTS ++ V P + +E+ I +D RIDTY ASGAGGQ+VN T++A+RI Sbjct: 185 IPVTESGGRIHTSAVTVAVLP-EAEDVEVTIDPNDLRIDTYCASGAGGQYVNRTETAIRI 243 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VVQCQ E+SQ KNK +A +LRA++Y+ ++E+ + ++++G G Sbjct: 244 THLPTGIVVQCQDEKSQLKNKEKAMKVLRARIYD--RAQQEQADAVAADRRSQVGSGDRS 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + VLDG+L++ + A + + Sbjct: 302 ERIRTYNF-PQGRVTDHRIGLTLYKIDAVLDGELEELLAALITADQ 346 >gi|315655086|ref|ZP_07907988.1| peptide chain release factor RF2 [Mobiluncus curtisii ATCC 51333] gi|315490567|gb|EFU80190.1| peptide chain release factor RF2 [Mobiluncus curtisii ATCC 51333] Length = 376 Score = 236 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 133/357 (37%), Positives = 211/357 (59%), Gaps = 4/357 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL + + D + Q+++ L + P LW + A+ + + + +++ Sbjct: 13 KLRASFATISAVMDPELLTQKIADLTQQAAAPDLWDDQEHAQKVTQSLSAAQVDMQRLQK 72 Query: 62 IQDRLCDNLILLELALEE---DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 ++ R+ D L+EL EE D +IL + + +K +++ + ++LL+GE D A Sbjct: 73 MRARIDDMEALVELGAEEAGEDRDAILADAEQTYETLKQDLDAMEVKTLLNGEYDERFAV 132 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + + +GAGG ++ D+A MLLRMY R+ E+ + T+ L+ EEAGIKS T + P AY Sbjct: 133 VTIRSGAGGVDAADFAQMLLRMYLRYCERHHYATKVLDTSYAEEAGIKSVTFQVDAPYAY 192 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G L E G HRL R+SP+++ +R TSF+++ V P+++ + IE+ ESD +ID +R+SG Sbjct: 193 GMLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLIETTDHIEVPESDIKIDVFRSSGP 252 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTTDSAVR+TH+PTG+V+ Q E+SQ +N+A A +L+++L L Q+ + Sbjct: 253 GGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLMLRHQQEHDKKKE 312 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSY L Q+VKDLRT E +P V DGDLD F+ A + +K Sbjct: 313 LAGD-VKASWGDQMRSYFLYGQQLVKDLRTGYESGNPDSVFDGDLDGFIDAAIRWRK 368 >gi|145634872|ref|ZP_01790579.1| peptide chain release factor 1 [Haemophilus influenzae PittAA] gi|145267738|gb|EDK07735.1| peptide chain release factor 1 [Haemophilus influenzae PittAA] Length = 361 Score = 236 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 111/344 (32%), Positives = 181/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R L D + + + + +E L+ + + L Sbjct: 10 LESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQNIEEAEIL 69 Query: 76 ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q + + I+ + Q L D + YLE+ AG GG E+ +A Sbjct: 70 LDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 129 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE ++++ E L ++ E+ G K + + G YG LK E G HR+ R+ Sbjct: 130 GDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGEGVYGQLKFESGGHRVQRVP 189 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 190 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 249 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++ + + +G G + Sbjct: 250 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQ--TDMRRNLLGSGDRSDK 307 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +V++G +D+ ++ + + Sbjct: 308 IRTYNY-PQGRVTDHRINLTIYRLDEVINGKIDELIQPIITEYQ 350 >gi|225621552|ref|YP_002722811.1| peptide chain release factor 2 [Brachyspira hyodysenteriae WA1] gi|225216373|gb|ACN85107.1| peptide chain release factor 2 [Brachyspira hyodysenteriae WA1] Length = 312 Score = 236 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 156/309 (50%), Positives = 213/309 (68%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L + I ++ + + L+E+A+E +D + +E ++ + + + Sbjct: 1 MKERMLLLDKIEPVENLIKNSNNIYELVEMAIESNDSEMEKELETECLELQKVFDELETK 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +L SGE DS +AYL ++AGAGGTES DWA+ML RMY R+ E+ F E + G+EAGI Sbjct: 61 NLFSGEFDSKNAYLTLNAGAGGTESCDWASMLSRMYVRFCERHGFTVETTDELPGDEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K + ++G AYG+L+ E GVHRLVRISP+D+N++RHTSF ++ V P +D+ IEIEI+ Sbjct: 121 KQISFYVQGLYAYGYLRSEIGVHRLVRISPFDANAKRHTSFVAVSVMPDIDEDIEIEINP 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDTYRASGAGGQHVN T SA+RITHIPT +VVQCQ ERSQH NK A ML+AKLY Sbjct: 181 ADLRIDTYRASGAGGQHVNKTSSAIRITHIPTNIVVQCQAERSQHNNKDMAMKMLKAKLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 +LE +K ++ KT+I WG QIRSYV QPYQMVKDLRT E + + V+DG++D+ Sbjct: 241 QLEKEKLDKEKQKIAGEKTDIAWGNQIRSYVFQPYQMVKDLRTGCESGNMNSVMDGNIDE 300 Query: 346 FMKATLAIK 354 F+ A L + Sbjct: 301 FISAYLKQQ 309 >gi|50842838|ref|YP_056065.1| peptide chain release factor 2 [Propionibacterium acnes KPA171202] gi|289426937|ref|ZP_06428661.1| peptide chain release factor 2 [Propionibacterium acnes J165] gi|295130890|ref|YP_003581553.1| peptide chain release factor 2 [Propionibacterium acnes SK137] gi|81611548|sp|Q6A808|RF2_PROAC RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|50840440|gb|AAT83107.1| peptide chain release factor 2 [Propionibacterium acnes KPA171202] gi|289159877|gb|EFD08057.1| peptide chain release factor 2 [Propionibacterium acnes J165] gi|291375816|gb|ADD99670.1| peptide chain release factor 2 [Propionibacterium acnes SK137] gi|332675771|gb|AEE72587.1| peptide chain release factor 2 [Propionibacterium acnes 266] Length = 368 Score = 236 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 153/353 (43%), Positives = 221/353 (62%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L+ + + D + ++ L + P+LW + A+ + L I ++ + Sbjct: 13 LDASLSSIENVLDPEAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +LLE A +DD L E + +++ E++ + +LLSG+ D +A + + Sbjct: 73 RARIEDVHVLLEFAAADDDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A MLLRMY RW+E+ +K E L+ EEAGIKSAT ++ P AYG L Sbjct: 133 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ ++I ESD R+D + ASG GGQ Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A +L+AKL E +++E N +S Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSE 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRTN E + V DGD+DDF+ A + ++ Sbjct: 313 GN--SWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 363 >gi|85715460|ref|ZP_01046441.1| peptide chain release factor 2 [Nitrobacter sp. Nb-311A] gi|85697655|gb|EAQ35531.1| peptide chain release factor 2 [Nitrobacter sp. Nb-311A] Length = 322 Score = 236 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 201/309 (65%), Positives = 249/309 (80%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L+++++ I +++ L D + ++EL E+D +++ E+ + L+ ++ EV ++ E Sbjct: 1 MQERTSLEDSLTGIGKVERELEDQIGMIELGEAENDQAVITESENALKTLRKEVARRELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D YLEVHAGAGGTESQDWA MLLRMY RWAEKR FK E LE GEEAGI Sbjct: 61 ALLSGEADRFDTYLEVHAGAGGTESQDWAQMLLRMYARWAEKRGFKVEYLEETPGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PVVDDSI+I+I E Sbjct: 121 KSATVQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVVDDSIKIDIKE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ RSQHKN+AQAW+MLRA+LY Sbjct: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KREE A +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ + S VLDGDLD+ Sbjct: 241 EIELKKREEQAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300 Query: 346 FMKATLAIK 354 FM ATLA + Sbjct: 301 FMAATLAQR 309 >gi|237799727|ref|ZP_04588188.1| peptide chain release factor 1 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022582|gb|EGI02639.1| peptide chain release factor 1 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 360 Score = 236 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 117/346 (33%), Positives = 175/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + RE ++ ++ K++ D L Sbjct: 9 LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYKQLIKVQADLEGAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + + Q L D + +LE+ AG GG E+ Sbjct: 69 LKDSDPDMRDMAVEEVRETKQQLVDLEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AE+R ++ E L ++GE G K ++G + YG LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI+ +D R+DTYR+SGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + Q I K +G G Sbjct: 249 THLPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAANAIASERKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ S +VL G +D ++ LA + Sbjct: 307 ERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQ 351 >gi|71065612|ref|YP_264339.1| peptide chain release factor 1 [Psychrobacter arcticus 273-4] gi|119361583|sp|Q4FSV3|RF1_PSYA2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|71038597|gb|AAZ18905.1| bacterial peptide chain release factor 1 (bRF-1) [Psychrobacter arcticus 273-4] Length = 362 Score = 236 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 113/347 (32%), Positives = 179/347 (51%), Gaps = 10/347 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V R + DP + + + + L E L + + + D + Sbjct: 9 LDQMVDRYEEVTALLSDPSVINDNNKFRELSVEHSDLMDITTLWQNYVGAETDQADAEAM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + + + + + L D A+LE+ AG GG E+ Sbjct: 69 LKEASDPDMKEMMQEEIDSARDTIVEMEEALNVMMLPKDPNDKVPAFLEIRAGTGGDEAA 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 ++ L RMY ++A+ + + E L ++GE G K + G + YG LK E GVHR+ Sbjct: 129 IFSGDLFRMYQKYAQAQGWTLEVLSANEGEHGGYKEIITRVSGNSVYGRLKFESGVHRVQ 188 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS ++ V P V+ + ++ +D R DT+R+SGAGGQHVNTTDSAVR Sbjct: 189 RVPDTESQGRVHTSACTVAVMPEVEIDDTVNLNPADIRFDTFRSSGAGGQHVNTTDSAVR 248 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTG VV+CQQERSQHKN+AQA ML +K+ ++++Q + + A+ + +G G Sbjct: 249 LTHIPTGTVVECQQERSQHKNRAQAMKMLISKIQQVKVQAQVDAADTI--RRDLVGSGDR 306 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ +++GDLD+ + A L + Sbjct: 307 SERIRTYNF-PQGRMTDHRINLTLYKLDSIMEGDLDEILDALLREHQ 352 >gi|260438934|ref|ZP_05792750.1| peptide chain release factor 1 [Butyrivibrio crossotus DSM 2876] gi|292808585|gb|EFF67790.1| peptide chain release factor 1 [Butyrivibrio crossotus DSM 2876] Length = 358 Score = 236 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 117/351 (33%), Positives = 185/351 (52%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + + + +N + P + + + LM+E+ L + + D Sbjct: 1 MFENLEEILIKYEDINMELASPDVTSDQRRFRNLMKEQSDLTPLVEAYTAYKKANQDIKD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 LE+ EE+D + + + L K +V + L D + +E+ AGAGG Sbjct: 61 SLEMLEEENDEEMREMLKEELSSAKDKVAELEEKIKILLLPKDPNDDKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYT +AE R++K E + + G+K ++ G AY LK E GV Sbjct: 121 DEAALFAAELFRMYTHYAEARRWKVEVVNSDETGIGGMKEVEFMVTGQGAYSVLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +S+ V P + +E++I E D RID RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTASVAVMP-EAEEVEVQIDEKDIRIDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+V+ Q E+SQ +NK +A+ +LRAKLY++E QK ++ +++IG Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQIQNKEKAFALLRAKLYDMECQK--AHDAEADARRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L+GD+ + + A +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIGLTLYKLDKILNGDIQEIIDACIAADQ 347 >gi|42522998|ref|NP_968378.1| hypothetical protein Bd1489 [Bdellovibrio bacteriovorus HD100] gi|39575203|emb|CAE79371.1| prfB [Bdellovibrio bacteriovorus HD100] Length = 321 Score = 236 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 164/311 (52%), Positives = 219/311 (70%) Query: 42 AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101 + L +E+ L+ A+ RL D+ +LLE+A E D E + ++ E Sbjct: 1 MQKLNKEKALLEKAVGEFDAFASRLSDSKVLLEMAEEAQDEGSFSEAKAEVVALEKLGEE 60 Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 + + +L+GE DSN +YL +++GAGGTES DWA+MLLRMYTR+A+K FK + +E+ +GE Sbjct: 61 LELKRVLNGELDSNSSYLSINSGAGGTESCDWASMLLRMYTRYADKHGFKVQIIEMTEGE 120 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 AGIKS TLLI+GP AYG+LK E GVHRLVRISP+DSN+RRHTSF+S++ + VDD I I Sbjct: 121 GAGIKSCTLLIEGPYAYGYLKAESGVHRLVRISPFDSNARRHTSFASVFAWAEVDDDINI 180 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 E+ D ++DT+RASGAGGQHVN TDSAVR+THIP+GV+V CQ ERSQ +N+ +A ML+ Sbjct: 181 EVRPDDLKVDTFRASGAGGQHVNRTDSAVRMTHIPSGVIVTCQVERSQIQNREKALKMLK 240 Query: 282 AKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 A+LYE+E++KR + S K WG QIRSYV+ PYQMVKD RT+ E DV+DG Sbjct: 241 ARLYEMEIEKRNAEKDAMNSQKKANEWGSQIRSYVMHPYQMVKDHRTDFETNQVDDVMDG 300 Query: 342 DLDDFMKATLA 352 DLD F+ + L Sbjct: 301 DLDGFIMSYLK 311 >gi|323466941|gb|ADX70628.1| Peptide chain release factor 2 [Lactobacillus helveticus H10] Length = 332 Score = 236 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 152/324 (46%), Positives = 202/324 (62%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + A+ L+ + L ++Q D L LEL E D + QE Sbjct: 1 MMQPGFWDDQEGAQKLISDNNLLKEKRDSFLKLQQDYEDELTALELLRAEPDADLQQEVE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +L+ ++ + + LLSG+ DS++A LE+H GAGGTE+ DW ML RMY R+ + Sbjct: 61 TDLKDLQEAFHNYELDLLLSGKYDSHNALLEIHPGAGGTEAMDWGQMLFRMYQRYCDAAG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E + GEEAG+KS ++ I G NAYG LK E GVHRLVRISP+D+ RRHTSF+S+ Sbjct: 121 FKFEINDYEPGEEAGLKSVSVRISGNNAYGMLKSENGVHRLVRISPFDATKRRHTSFASV 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DDSI+I+I D RID YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ Sbjct: 181 EVIPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 +N+ A N LRAKL+ LE +K+++ + + EIGWG QIRSYV PY +VKDLRT Sbjct: 241 LQNRETAMNELRAKLFHLEEEKKQKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTG 300 Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353 E + V+DG L F+ + L Sbjct: 301 YETADVNGVMDGKLQPFIYSYLQW 324 >gi|225019405|ref|ZP_03708597.1| hypothetical protein CLOSTMETH_03358 [Clostridium methylpentosum DSM 5476] gi|224947822|gb|EEG29031.1| hypothetical protein CLOSTMETH_03358 [Clostridium methylpentosum DSM 5476] Length = 361 Score = 236 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 118/352 (33%), Positives = 186/352 (52%), Gaps = 13/352 (3%) Query: 13 LFDWDNA-VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + +R +N K DP++ + + LMRE +HL I +E + + Sbjct: 4 IFDKLSLTEKRFDEINEKLMDPNVVNDQHAYRDLMRELKHLTPIIDKYREYKAAKDNLEE 63 Query: 72 LLELALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 E+ E +E I+ E + L + D D +E+ GAG Sbjct: 64 AKEMLSEGGLDKEFKEMVQEQYSESQQAIEDLGEELKILLLPTDPNDDKDVIIEIRGGAG 123 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L RMYT +AE + +KTE L ++ E G K + + G AY LK E G Sbjct: 124 GEEAALFAYNLYRMYTMYAEAKGWKTEILSANETELGGFKEVSFEVSGEGAYSRLKFESG 183 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +++ R HTS ++ V P + +E +I+ +D ++DT+RASGAGGQHVN T Sbjct: 184 VHRVQRVPETEASGRIHTSTVTVAVLP-EAEEVEFDINPTDIQVDTFRASGAGGQHVNKT 242 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SA+R+T++PTG+VV+CQ ERSQHKNK +A +LR +LYE + +E I K ++ Sbjct: 243 ESAIRLTYLPTGLVVECQDERSQHKNKDKAMKILRTRLYEQAM--KEATDKIASERKAQV 300 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P + D R + ++GD+D+ + A + + Sbjct: 301 GTGDRSERIRTYNY-PQGRITDHRIGLTLYHLEQNMNGDIDEIIDALITADQ 351 >gi|297618446|ref|YP_003703605.1| peptide chain release factor 1 [Syntrophothermus lipocalidus DSM 12680] gi|297146283|gb|ADI03040.1| peptide chain release factor 1 [Syntrophothermus lipocalidus DSM 12680] Length = 355 Score = 236 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 109/347 (31%), Positives = 183/347 (52%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++ + P + + + + L + +E + D + Sbjct: 5 LDKLEEKFEEITALLSQPEVIADQARFQKYAKAHAELSELVDTYREYKRVRQDKTDARAM 64 Query: 76 ALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EE+D + + ++ + + + + L D + +E+ AG GG E+ Sbjct: 65 LEEEEDDDLRNMLVEEIRVLSDKEEKLEQRLKLLLLPKDPNDEKNVIMEIRAGTGGEEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AEK+ +K + ++ + G K +++G AY LK E GVHR+ Sbjct: 125 LFAADLFRMYSRYAEKQGWKVDIMDTSYSDLGGFKEIIFIVEGRGAYSKLKFESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ V P + +E++I+ +D RID + +SG GGQ VNTT SAVR Sbjct: 185 RIPVTESGGRIHTSAATVAVLP-EAEEVEVDINPNDLRIDVFCSSGPGGQSVNTTQSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV CQ E+SQHKNK +A +LR++L LEL++ E A I ++ ++++G G Sbjct: 244 ITHLPTGIVVSCQDEKSQHKNKDKAMRVLRSRL--LELKRAEHEAEIADARRSQVGSGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ VL+G+LD+ ++A + + Sbjct: 302 SERIRTYNF-PQGRVTDHRINLTLHKLDVVLEGELDEIIEALITHDQ 347 >gi|317499018|ref|ZP_07957299.1| peptide chain release factor 1 [Lachnospiraceae bacterium 5_1_63FAA] gi|291560728|emb|CBL39528.1| bacterial peptide chain release factor 1 (bRF-1) [butyrate-producing bacterium SSC/2] gi|316893668|gb|EFV15869.1| peptide chain release factor 1 [Lachnospiraceae bacterium 5_1_63FAA] Length = 357 Score = 236 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 121/351 (34%), Positives = 181/351 (51%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + V RL + + DP + N + LM+E+ L + KE + + Sbjct: 1 MFDKLEGLVDRLDTVLQELNDPDVAGNQNRFRDLMKEQNELTPIVEKYKEYKAEKQNIED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 L L EE D + + + L K VE + + D + +E+ AGAGG Sbjct: 61 SLMLLEEESDEEMKELAKEELNESKANVERLEEELKILLIPKDPMDDKNIIVEMRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ + + RMY +AE +++K L ++ G K ++ G AY K E GV Sbjct: 121 DEAGLFVADVARMYRNYAESKRWKVNTLSFNESGIGGFKELVFMVSGQGAYSRFKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +S R HTS ++ + P + +E+EI +DC+ D +RASG GGQ VNTTD Sbjct: 181 HRVQRIPATESGGRIHTSTITVAIMP-EVEDVEVEIDMNDCKFDVFRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+VV CQ E+SQ KNK +A +LR++LYELE QK K++IG Sbjct: 240 SAVRLTHIPTGIVVSCQDEKSQLKNKDKALKVLRSRLYELEQQK--AHDEEAAKRKSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++GDLD+ + + A + Sbjct: 298 TGDRSEKIRTYNY-PQGRVTDHRIKLTLHKLDSIMNGDLDELIDSLTAADQ 347 >gi|210615399|ref|ZP_03290526.1| hypothetical protein CLONEX_02742 [Clostridium nexile DSM 1787] gi|210150248|gb|EEA81257.1| hypothetical protein CLONEX_02742 [Clostridium nexile DSM 1787] Length = 313 Score = 236 bits (601), Expect = 5e-60, Method: Composition-based stats. Identities = 161/309 (52%), Positives = 219/309 (70%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+E + L + + + ++ D +L+E+A +E+D S+L E L + E + + Sbjct: 1 MKELKSLKDFLEKVSQLTTSYEDIGVLIEMAYDENDESLLPEIESELTAFQQGYEEIRIQ 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGE D ++A + +HAGAGGTES DWANML RMYTRWAE++ F E L+ DG+ AG+ Sbjct: 61 TLLSGEYDKDNAIVTLHAGAGGTESCDWANMLYRMYTRWAERKGFSVEVLDFLDGDVAGL 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ T + G NAYG+LK E+GVHRLVRISP+++ +R TSF+S V P ++D I+IE+++ Sbjct: 121 KAVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFASCDVVPDIEDDIDIELND 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D +IDTYRASGAGGQHVN T SA+RITHIPTG+VVQCQ ERSQH NK +A ML+AKLY Sbjct: 181 DDLKIDTYRASGAGGQHVNKTSSAIRITHIPTGIVVQCQNERSQHNNKEKAMQMLKAKLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 L+ Q++ E + EIG+G QIRSYV+QPY +VKD RTN+E + S VLDG++D Sbjct: 241 LLKEQEQAEKVSDIRGEIKEIGFGNQIRSYVMQPYTLVKDHRTNVESGNVSSVLDGNIDL 300 Query: 346 FMKATLAIK 354 FM A L + Sbjct: 301 FMNAYLKAQ 309 >gi|146306094|ref|YP_001186559.1| peptide chain release factor 1 [Pseudomonas mendocina ymp] gi|166223589|sp|A4XR61|RF1_PSEMY RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|145574295|gb|ABP83827.1| bacterial peptide chain release factor 1 (bRF-1) [Pseudomonas mendocina ymp] Length = 360 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 125/346 (36%), Positives = 180/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 DN R L D + + + +E ++ I+ +E++ D L Sbjct: 9 LDNLSDRFEELTALLGDAEVISKQTQFRAYSKEYAEIEPVIATFRELRKVQSDLEGAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLE---VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E D + Q + + Q L D + YLEV AG GG E+ Sbjct: 69 LKESDPDLREMAEEEVAQAKEALTTLEDKLQRMLLPKDPNDGRNVYLEVRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AEK+ ++ E L ++GE G K ++G N Y LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAEKQGWRVEVLSANEGEHGGFKEVIARVEGDNVYAKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI+ +D R+DTYR+SGAGGQHVNTTDSA+RI Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG VV+CQ+ERSQHKN+A+A L AKL + Q+ I E+ K +G G Sbjct: 249 THIPTGTVVECQEERSQHKNRAKAMAWLAAKLQD--QQEAAAHKEISETRKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ S S+V+ G ++ ++ LA + Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYSLSEVMAGGVEAVIEPLLAEYQ 351 >gi|237729831|ref|ZP_04560312.1| peptide chain release factor 2 [Citrobacter sp. 30_2] gi|226908437|gb|EEH94355.1| peptide chain release factor 2 [Citrobacter sp. 30_2] Length = 310 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 171/308 (55%), Positives = 216/308 (70%), Gaps = 1/308 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 +ER L+ + + ++ L D LLELA+E DD E L ++ ++ +F Sbjct: 2 GKERSSLEAIVDTLDQMSQGLEDVSGLLELAVEADDEETFNEAVAELDTLEDKLAQLEFR 61 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 + SGE DS D YL++ AG+GGTE+QDWA+ML+RMY RWAE R FKTE +E +GE AGI Sbjct: 62 RMFSGEYDSADCYLDIQAGSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAGI 121 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KS T+ I G AYGWL+ E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+I+I+ Sbjct: 122 KSVTIRIAGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINP 181 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID YRASGAGGQHVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLY Sbjct: 182 ADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLY 241 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ELE+QK+ E +K++IGWG QIRSYVL +KDLRT +E + VLDG LD Sbjct: 242 ELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQ 300 Query: 346 FMKATLAI 353 F++A+L Sbjct: 301 FIEASLKA 308 >gi|93006237|ref|YP_580674.1| peptide chain release factor 1 [Psychrobacter cryohalolentis K5] gi|119361584|sp|Q1QAW3|RF1_PSYCK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|92393915|gb|ABE75190.1| bacterial peptide chain release factor 1 (bRF-1) [Psychrobacter cryohalolentis K5] Length = 362 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 113/347 (32%), Positives = 180/347 (51%), Gaps = 10/347 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V R + DP + + + + L E L + + + D + Sbjct: 9 LDQMVDRYEEVTALLSDPSVISDNNKFRELSVEHSDLMDITTLWQNYVGAEKDQADAEAM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + + + + + L D A+LE+ AG GG E+ Sbjct: 69 LKEASDPDMKEMMQEEIDSARDTIVEMEEALNLMMLPKDPNDKVPAFLEIRAGTGGDEAA 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 ++ L RMY ++A+ + + E L ++GE G K + G + YG LK E GVHR+ Sbjct: 129 IFSGDLFRMYQKFAQNQGWTLEILSANEGEHGGYKEIITRVSGNSVYGRLKFESGVHRVQ 188 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS ++ V P V+ ++++ +D R DT+R+SGAGGQHVNTTDSAVR Sbjct: 189 RVPDTESQGRVHTSACTVAVMPEVEIDDTVDLNPADIRFDTFRSSGAGGQHVNTTDSAVR 248 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTG VV+CQQERSQHKN+AQA ML +K+ ++++Q + + A+ + +G G Sbjct: 249 LTHIPTGTVVECQQERSQHKNRAQAMKMLISKIQQVKVQAQVDAADTI--RRDLVGSGDR 306 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ +++GDLD+ + A L + Sbjct: 307 SERIRTYNF-PQGRMTDHRINLTLYKLDSIMEGDLDEILDALLREHQ 352 >gi|145639103|ref|ZP_01794711.1| peptide chain release factor 1 [Haemophilus influenzae PittII] gi|145272075|gb|EDK11984.1| peptide chain release factor 1 [Haemophilus influenzae PittII] gi|309751054|gb|ADO81038.1| Peptide chain release factor 1 [Haemophilus influenzae R2866] Length = 361 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 112/344 (32%), Positives = 181/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R L D + + + + +E L+ + + L Sbjct: 10 LESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQNIEEAEIL 69 Query: 76 ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q + + I+ + Q L D + YLE+ AG GG E+ +A Sbjct: 70 LDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 129 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE +++ E L ++ E+ G K +L+ G YG LK E G HR+ R+ Sbjct: 130 GDLFRMYSRYAESKRWSMEVLSENESEQGGFKEIIVLVSGEGVYGQLKFESGGHRVQRVP 189 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 190 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 249 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++ + + +G G + Sbjct: 250 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQ--TDMRRNLLGSGDRSDK 307 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +V++G +D+ ++ + + Sbjct: 308 IRTYNY-PQGRVTDHRINLTIYRLDEVINGKIDELIQPIITEYQ 350 >gi|317473032|ref|ZP_07932332.1| peptide chain release factor 1 protein [Anaerostipes sp. 3_2_56FAA] gi|316899461|gb|EFV21475.1| peptide chain release factor 1 protein [Anaerostipes sp. 3_2_56FAA] Length = 357 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 124/351 (35%), Positives = 183/351 (52%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ V+RL + + DP + + + LM+E+ L + KE + Sbjct: 1 MFDKLESLVERLDTVLQQLNDPDVAGDQNRFRDLMKEQSDLAPIVEKYKEYVQEKQNIEE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 LEL EE D + + + L K VE + + D + +E+ AGAGG Sbjct: 61 SLELLEEESDEEMKELAKEELSESKANVERLEEELKILLIPKDPNDDKNIIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY +AE R++K E L ++ G K +I G AY K E GV Sbjct: 121 DEAALFAADVARMYRSYAEGRRWKVETLSFNESGIGGFKELVFMISGQGAYSRFKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +S R HTS ++ + P V+D +DC+ D +RASG GGQ VNTTD Sbjct: 181 HRVQRIPATESGGRIHTSTITVAIMPEVEDVEVEV-DLNDCKFDVFRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+VV CQ E+SQ KNK +A +LR++LYELE QK E K+++G Sbjct: 240 SAVRLTHLPTGIVVSCQDEKSQLKNKDKALKVLRSRLYELEQQK--AHDAEAEKRKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + V++GDLD+ + + A + Sbjct: 298 TGDRSEKIRTYNY-PQGRVTDHRIKLTLHKLDSVMNGDLDELIDSLTAADQ 347 >gi|313683376|ref|YP_004061114.1| bacterial peptide chain release factor 2 (brf-2) [Sulfuricurvum kujiense DSM 16994] gi|313156236|gb|ADR34914.1| bacterial peptide chain release factor 2 (bRF-2) [Sulfuricurvum kujiense DSM 16994] Length = 369 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 175/351 (49%), Positives = 240/351 (68%), Gaps = 2/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ ++ + G+ RLS + W + A ++ +E+ L+ ++ + Sbjct: 13 LTTKMQNVTGVVRPQEISARLSEIEALENSDGFWNDAAAAGVIQKEKTQLERRLAKYSKT 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D + L E+A EE D ++ + ++ V+ + E LLSGE DS++A + +H Sbjct: 73 FNTLGDAVDLYEMAKEEGDEETIESLFADAGSLENNVKSMEVEVLLSGEHDSHNAIVTIH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+MLLRMYTRWAE+ F E L+ GEEAGIK A LLIKG N YG+LK Sbjct: 133 PGAGGTESQDWASMLLRMYTRWAERHDFTVEMLDYQAGEEAGIKDAALLIKGVNVYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVRISPYDS ++RHTSF+S+ V P +DD I+I+I + D RIDTYRASGAGGQH Sbjct: 193 NENGIHRLVRISPYDSAAKRHTSFTSVMVSPELDDDIDIDIEDRDIRIDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SA+RITHIPTG+VVQCQ +RSQHKNKA A+ ML+++LYELE++K++ + E Sbjct: 253 VNKTESAIRITHIPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELEMEKKQAAVDGIE-- 310 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K+E GWG QIRSYVL PYQ VKD R+ I ++ S++LDGD+D+ ++ L Sbjct: 311 KSENGWGHQIRSYVLAPYQQVKDTRSGIPYSNISNILDGDIDEMIEGVLIA 361 >gi|159027417|emb|CAO86901.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 330 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 139/322 (43%), Positives = 212/322 (65%), Gaps = 1/322 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W N A+ ++E +++ + ++L D ++EL E D ++L+E +DN+ Sbjct: 5 PTFWDNPDTAQKTLQELNECKSSLETYQSWCEQLEDTKAIIELLELESDRALLEEATDNI 64 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 ++ +++ + + LL+G D A L ++AGAGGT++QDW MLLRMY+RWAEK+ +K Sbjct: 65 THLQHDLDRWELQQLLNGPYDPKGAVLTINAGAGGTDAQDWTEMLLRMYSRWAEKQGYKV 124 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 EI +G+EAGIKS T+ I G AYG+LKGE+G HRLVRISP+++N +R TSF+ + V Sbjct: 125 TLAEISEGDEAGIKSVTIEIAGTYAYGYLKGEKGTHRLVRISPFNANGKRQTSFAGVEVM 184 Query: 213 PV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P+ DD + +EI + D I T R+ G GGQ+VN ++AVR+ H+PTG+ V+C QERSQ + Sbjct: 185 PILGDDVVRVEIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAVRCTQERSQLQ 244 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 NK +A +L+AKL + +++ + E WG QIR+YV PYQ+VKDLR+N+E Sbjct: 245 NKEKALALLKAKLLIIAREQQAQAIAEIRGDMVEAAWGNQIRNYVFHPYQLVKDLRSNVE 304 Query: 332 KTSPSDVLDGDLDDFMKATLAI 353 T + V++GDLD F++A L + Sbjct: 305 TTDVTGVMNGDLDSFIEAYLRL 326 >gi|330961728|gb|EGH61988.1| peptide chain release factor 1 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 360 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 117/346 (33%), Positives = 175/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + RE ++ ++ K++ D L Sbjct: 9 LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYKQLLKVQADLEGAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + + Q L D + +LE+ AG GG E+ Sbjct: 69 LKDSDPDMREMAVEEVRETKEQLVDLEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AE+R ++ E L ++GE G K ++G + YG LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI+ +D R+DTYR+SGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + Q I K +G G Sbjct: 249 THLPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAANAIASERKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ S +VL G +D ++ LA + Sbjct: 307 ERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQ 351 >gi|253571104|ref|ZP_04848511.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251839057|gb|EES67141.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 354 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 131/350 (37%), Positives = 203/350 (58%), Gaps = 11/350 (3%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GG+FD D ++ +T+ P W + +A+ M+ + L I E++ + Sbjct: 1 GGIFDIDGKKIQVEEEQLRTQAPGFWDDQKKAEAQMKLVKDLQKWIDGYNEVKTLADELE 60 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L +++ + + VE + +++L EAD L++++GAGGTES Sbjct: 61 --LSFDFYKEELVTEGDVDAAYAKASEAVEALELKNMLRDEADQMACVLKINSGAGGTES 118 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA+ML+RMY R+AE +K + +G+EAGIK+ T+ I+G AYG+LKGE GVHRL Sbjct: 119 QDWASMLMRMYLRYAETNGYKATIANLQEGDEAGIKTCTINIEGDFAYGYLKGENGVHRL 178 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR+SPY++ +R TSF+S++V P+VDDSIE+ I + DT+R+ GAGGQ+VN +S V Sbjct: 179 VRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNILPACISWDTFRSGGAGGQNVNKVESGV 238 Query: 251 RITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 R+ + ++++ + R Q KN+ A LR+ LY+ ELQ R E+ Sbjct: 239 RLRYQYKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKVEAG 298 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K +I WG QIRSYV + VKD RTN + + + V+DG +++F+KA L Sbjct: 299 KKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGKIEEFIKAYLM 347 >gi|329904245|ref|ZP_08273720.1| Peptide chain release factor 1 [Oxalobacteraceae bacterium IMCC9480] gi|327548069|gb|EGF32798.1| Peptide chain release factor 1 [Oxalobacteraceae bacterium IMCC9480] Length = 360 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 123/344 (35%), Positives = 177/344 (51%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D RL LN L ++ + L RE L + + D ++ Sbjct: 9 LDQLADRLGELNELLTQEDLASDMDNYRKLTREHAELGPLVELYDSFRVAEADIATAHDM 68 Query: 76 ALEEDDCSILQETS-DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D QE R + Q L D + +LE+ AG GG ES +A Sbjct: 69 LADPDMKDFAQEEILAARARTEQIEADLQTMLLPKDPNDERNLFLEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE+ +++ E + + G K + + G AY LK E G HR+ R+ Sbjct: 129 GDLLRMYTRYAERNRWQVEMVSESSSDVGGYKEVIVRVIGNGAYSRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P VD+ +++I+ SD RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 189 TTETQGRIHTSACTVAVMPEVDEISDVDINPSDLRIDTYRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQHKNKA A +L A++ + Q RE+ + + K+ IG G + Sbjct: 249 LPTGIVVECQDDRSQHKNKASALKVLAARIKDA--QVREQQSKEAATRKSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++DGDL+D A A + Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYKLDFIMDGDLNDLTGALAAEHQ 349 >gi|187932243|ref|YP_001892228.1| peptide chain release factor 2 [Francisella tularensis subsp. mediasiatica FSC147] gi|187713152|gb|ACD31449.1| peptide chain release factor 2 [Francisella tularensis subsp. mediasiatica FSC147] Length = 325 Score = 235 bits (600), Expect = 6e-60, Method: Composition-based stats. Identities = 165/324 (50%), Positives = 220/324 (67%), Gaps = 3/324 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 + ED +W N A+ L +++ L+N + + I L LLEL E++ Sbjct: 2 ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISKTLETLSELLELGKEDESLMQEIAK 61 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++ E +F + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ Sbjct: 62 DTQNVASEI--EKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK ++ DG+ AGIK TL I+G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS Sbjct: 180 VFISPEVDDDIDIEINPTDLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QHKN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL +KDLRT Sbjct: 240 QHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIKDLRT 298 Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352 +E T+ VLDGDLD F++A+L Sbjct: 299 GVENTNTQAVLDGDLDKFIEASLK 322 >gi|254796954|ref|YP_003081791.1| peptide chain release factor 2 [Neorickettsia risticii str. Illinois] gi|254590201|gb|ACT69563.1| peptide chain release factor 2 [Neorickettsia risticii str. Illinois] Length = 334 Score = 235 bits (600), Expect = 7e-60, Method: Composition-based stats. Identities = 167/330 (50%), Positives = 235/330 (71%), Gaps = 1/330 (0%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 + + P LW++ A++L++E+ ++ ++ +E+ +L D ++ELA ++ + Sbjct: 2 EEIQALVDSPRLWEDQSRAQLLLKEKSQIETSLKEFRELSIQLDDLTEMIELASKDGEEG 61 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 +++ L +K +++ K+ E L SGEAD ND LE+ +GAGGTES DWA MLLRMYTR Sbjct: 62 AMKDLERELLLLKEKIQKKEIECLFSGEADGNDCLLEIQSGAGGTESNDWAMMLLRMYTR 121 Query: 144 WAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 WAE KF+ + ++ +GEE GIKS TL + G NAYGW + E GVHRLVRISP+D+N++R Sbjct: 122 WAEIYHKFQVQIVDKVEGEETGIKSCTLKVMGKNAYGWARTETGVHRLVRISPFDANAKR 181 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSF+ ++V P ++ I I I E D +IDTYRASGAGGQHVN T+SAVRITH+P+ +VVQ Sbjct: 182 HTSFAKVFVSPCMEGEINISIDEKDLKIDTYRASGAGGQHVNKTESAVRITHLPSKIVVQ 241 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 Q RSQH+NKA+A ML+++LYE+EL+K+EE N + + IGWG QIRSYVL PYQM Sbjct: 242 SQSSRSQHQNKAEAIQMLKSRLYEIELRKKEEKVNAARNVEDSIGWGYQIRSYVLHPYQM 301 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +KDLRT E + + VLDGDLD F+ AT++ Sbjct: 302 IKDLRTGHEVGNITSVLDGDLDSFIIATIS 331 >gi|325299167|ref|YP_004259084.1| Class I peptide chain release factor [Bacteroides salanitronis DSM 18170] gi|324318720|gb|ADY36611.1| Class I peptide chain release factor [Bacteroides salanitronis DSM 18170] Length = 371 Score = 235 bits (599), Expect = 7e-60, Method: Composition-based stats. Identities = 134/358 (37%), Positives = 207/358 (57%), Gaps = 11/358 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L D +N ++ +T+ P W + +A+ M++ + L I E+ Sbjct: 10 IKERTEALYRYLDIENKKVQVEEEQLRTQAPGFWDDAKKAEAQMKKVKTLQGWIDGYNEV 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + + D+ E + + + VE + +++L EAD D L+++ Sbjct: 70 KTLADELELAFDFYK--DELVSEAEVDEAYVQAQKAVEELELKNMLRSEADQMDCVLKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDWA+ML+RMY RWAE +K + +G+EAGIK+ T+ I+G AYG+LK Sbjct: 128 SGAGGTESQDWASMLMRMYMRWAESHGYKLSVANLQEGDEAGIKTVTMNIEGAYAYGYLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVR+SPY++ +R TSF+S++V P+VDDSIE+ + + DT+R+ GAGGQ+ Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVTVEPARLSWDTFRSGGAGGQN 247 Query: 243 VNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 VN +S VR+ + ++++ + R Q KNK A LR+ LY+ ELQ R E Sbjct: 248 VNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNKENAMRQLRSILYDKELQHRME 307 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ K +I WG QIRSYV + VKD RTN + + + V+DG +D F+KA L Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYLM 364 >gi|331090678|ref|ZP_08339527.1| peptide chain release factor 1 [Lachnospiraceae bacterium 2_1_46FAA] gi|330400092|gb|EGG79743.1| peptide chain release factor 1 [Lachnospiraceae bacterium 2_1_46FAA] Length = 356 Score = 235 bits (599), Expect = 7e-60, Method: Composition-based stats. Identities = 110/351 (31%), Positives = 192/351 (54%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCD 68 +FD ++ + R + + ++P + + + LM+E+ L + E + + D Sbjct: 1 MFDRLEDLIIRFEEIMGELQEPDVANDQNRFRKLMKEQADLTPIVDAYNEYKSAKQAIAD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + +LE+ +E+ + +E ++ + + L D + +E+ AGAGG Sbjct: 61 SEEMLEMESDEEMRELAKEELSASKKRVEELEHELKILLLPKDPNDDKNIMVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 ES +A + RMY +AE +++KTE + ++ G K ++ G + Y +K E GV Sbjct: 121 DESALFAAEVYRMYVHYAESKRWKTELISFNENGIGGFKEVVFMVSGQSVYSRMKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P + +++ I + D RID RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMP-EAEEVDVVIDDKDIRIDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+V+ Q E+SQ +NK +A+ +LR+KLYELEL+K++ + E+ +++IG Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQ--SAEAEARRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V + R + ++++GDLD+ + +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTEHRIKLTLYKIDNIMNGDLDEIIDPLIAADQ 347 >gi|320529373|ref|ZP_08030461.1| peptide chain release factor 1 [Selenomonas artemidis F0399] gi|320138339|gb|EFW30233.1| peptide chain release factor 1 [Selenomonas artemidis F0399] Length = 354 Score = 235 bits (599), Expect = 7e-60, Method: Composition-based stats. Identities = 109/346 (31%), Positives = 177/346 (51%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---DNLIL 72 + L DP + ++ + RE L ++ + + ++ + Sbjct: 5 LTAVADKYRELEALLSDPTVMADMARWQRYTREHAALTPIVTAYEAYRKAEETVAEDKEM 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L A E +L+E + + + L D + +E+ G GG E+ Sbjct: 65 LAEADAEMKELLLEEIAAAEAERERLAKELPILLLPRDPNDDKNVIVEIRGGVGGEEAAL 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY R+AE++ ++TE L ++ E G K + L+ G AY LK E G HR+ R Sbjct: 125 FAASLFRMYARYAERQGWRTEILSSNETEIGGFKEISFLVTGAGAYSKLKYESGTHRVQR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 I +S R HTS ++ V P + +E+ I +D RIDTY ASGAGGQ+VN T++A+RI Sbjct: 185 IPVTESGGRIHTSAVTVAVLP-EAEDVEVTIDPNDLRIDTYCASGAGGQYVNRTETAIRI 243 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VVQCQ E+SQ KNK +A +LRA++Y+ ++E+ + ++++G G Sbjct: 244 THLPTGIVVQCQDEKSQLKNKEKAMKVLRARIYD--RAQQEQADAVAADRRSQVGSGDRS 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + VLDG+L++ + A + + Sbjct: 302 ERIRTYNF-PQGRVTDHRIGLTLYKIDAVLDGELEELLAALITADQ 346 >gi|313792395|gb|EFS40490.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA1] gi|313801469|gb|EFS42718.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA2] gi|313838232|gb|EFS75946.1| peptide chain release factor 2 [Propionibacterium acnes HL086PA1] gi|314963179|gb|EFT07279.1| peptide chain release factor 2 [Propionibacterium acnes HL082PA1] gi|315078242|gb|EFT50285.1| peptide chain release factor 2 [Propionibacterium acnes HL053PA2] gi|327453496|gb|EGF00151.1| peptide chain release factor 2 [Propionibacterium acnes HL092PA1] Length = 371 Score = 235 bits (599), Expect = 7e-60, Method: Composition-based stats. Identities = 153/353 (43%), Positives = 220/353 (62%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L+ + + D ++ L + P+LW + A+ + L I ++ + Sbjct: 16 LDASLSSIENVLDPAAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +LLE A +DD L E + +++ E++ + +LLSG+ D +A + + Sbjct: 76 RARIEDVHVLLEFAAADDDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 135 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A MLLRMY RW+E+ +K E L+ EEAGIKSAT ++ P AYG L Sbjct: 136 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 195 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ ++I ESD R+D + ASG GGQ Sbjct: 196 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 255 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A +L+AKL E +++E N +S Sbjct: 256 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSE 315 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRTN E + V DGD+DDF+ A + ++ Sbjct: 316 GN--SWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 366 >gi|118496781|ref|YP_897831.1| peptide chain release factor 2 [Francisella tularensis subsp. novicida U112] gi|194324538|ref|ZP_03058310.1| peptide chain release factor 2 [Francisella tularensis subsp. novicida FTE] gi|118422687|gb|ABK89077.1| peptide chain release factor 2 [Francisella novicida U112] gi|194321373|gb|EDX18859.1| peptide chain release factor 2 [Francisella tularensis subsp. novicida FTE] Length = 325 Score = 235 bits (599), Expect = 7e-60, Method: Composition-based stats. Identities = 167/324 (51%), Positives = 221/324 (68%), Gaps = 3/324 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 + ED +W N A+ L +++ L+N + + I + L LLELA E++ Sbjct: 2 ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELAEEDESLMQEIAK 61 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++ E +F + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ Sbjct: 62 DTQNVASEI--EKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADGH 119 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK + DG+ AGIK TL I+G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S Sbjct: 120 GFKVSVDNVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QHKN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL VKDLRT Sbjct: 240 QHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRVKDLRT 298 Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352 +E T+ VLDGDLD F++A+L Sbjct: 299 GVENTNTQAVLDGDLDKFIEASLK 322 >gi|283479628|emb|CAY75544.1| Peptide chain release factor 1 (RF-1) [Erwinia pyrifoliae DSM 12163] Length = 310 Score = 235 bits (599), Expect = 8e-60, Method: Composition-based stats. Identities = 170/308 (55%), Positives = 220/308 (71%), Gaps = 1/308 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 +ER L+ + + ++ L D LLELA+E +D E + L + ++ +F Sbjct: 2 GKERSALEAVVETLDQMTQGLEDVSGLLELAVEAEDEETFNEAVNELDGLDKKLGELEFR 61 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 + SGE DS D Y+++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E DGE AG Sbjct: 62 RMFSGEYDSADCYMDIQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGEVAGT 121 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G A+GWL+ E GVHRLVR SP+DS RRHTSFSS+++YP VDD+I+IEI+ Sbjct: 122 KSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEINP 181 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID YRASGAGGQHVN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+ LRAKLY Sbjct: 182 ADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLY 241 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E E+QK+ E +K++IGWG QIRSYVL +KDLRT++E + VLDGDLD Sbjct: 242 EYEMQKKNADKQTAEDNKSDIGWGSQIRSYVLDD-SRIKDLRTSVETRNTQAVLDGDLDR 300 Query: 346 FMKATLAI 353 F++A+L Sbjct: 301 FIEASLKA 308 >gi|104780100|ref|YP_606598.1| peptide chain release factor 1 [Pseudomonas entomophila L48] gi|166223588|sp|Q1IEX1|RF1_PSEE4 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|95109087|emb|CAK13784.1| peptide chain release factor 1 [Pseudomonas entomophila L48] Length = 360 Score = 235 bits (599), Expect = 8e-60, Method: Composition-based stats. Identities = 120/346 (34%), Positives = 175/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + RE ++ I+ + D L Sbjct: 9 LDTLQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVIACYVGWRKVQDDLEGAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLE---VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + + Q L D + +LE+ AG GG E+ Sbjct: 69 LKDADPDLREMAVEEVREAKEQLVGLESQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AEKR ++ E L ++GE G K ++G + YG LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGDSVYGKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ + IEI+ +D R+DTYRASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQVAIEINPADLRVDTYRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ+ERSQHKN+A+A + L AKL + +Q I K +G G Sbjct: 249 THLPTGIVVECQEERSQHKNRARAMSWLSAKLND--MQTSAAQNAIASERKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ S D+L G +D ++ LA + Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYSLDDILAGGVDAVIEPLLAEYQ 351 >gi|49474202|ref|YP_032244.1| peptide chain release factor 2 [Bartonella quintana str. Toulouse] gi|49239706|emb|CAF26082.1| Peptide chain release factor 2 (rf-2 [Bartonella quintana str. Toulouse] Length = 322 Score = 235 bits (599), Expect = 8e-60, Method: Composition-based stats. Identities = 211/309 (68%), Positives = 253/309 (81%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD++IS I+ L + + L+ + EE D I+ + + ++ +K E++ +Q + Sbjct: 2 MRERQRLDDSISGIQSFTKTLEECIELIAMGEEESDVEIITDAENLIRNLKNEIDKRQID 61 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LLS EAD ND YLEVHAGAGGTESQDWA+MLLRMY RWAE+ K K E LEIHDGEEAGI Sbjct: 62 MLLSREADPNDTYLEVHAGAGGTESQDWASMLLRMYMRWAEQHKMKVEILEIHDGEEAGI 121 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ +KG NAYG LK E GVHRLVRISPYDSN++RHTSF+SIWVYPV+DD+IE+++SE Sbjct: 122 KSATIFVKGHNAYGLLKTESGVHRLVRISPYDSNAKRHTSFASIWVYPVIDDNIEVDVSE 181 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD RIDTYR+SGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+LY Sbjct: 182 SDVRIDTYRSSGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLY 241 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE N ESSKTEIGWG QIRSYVLQPYQ+VKDLRT +E T P VL+G+LD Sbjct: 242 EQELKKREEKTNAVESSKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTDPQSVLNGNLDA 301 Query: 346 FMKATLAIK 354 F++A LA + Sbjct: 302 FIEAALAQR 310 >gi|254447802|ref|ZP_05061267.1| peptide chain release factor 1 [gamma proteobacterium HTCC5015] gi|198262582|gb|EDY86862.1| peptide chain release factor 1 [gamma proteobacterium HTCC5015] Length = 358 Score = 235 bits (599), Expect = 8e-60, Method: Composition-based stats. Identities = 117/344 (34%), Positives = 183/344 (53%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +N V R + DP + + + L +E L+ E Q + + E+ Sbjct: 9 LENLVARHEEVGMLLSDPDVINDQNRFRDLSKEYAELEPVTKTFSEYQTQSDNLSTAEEM 68 Query: 76 ALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + QE D I+ + Q L S D+++ Y+E+ AG GG E+ +A Sbjct: 69 LDDPDMKEMAQEEIDSARVEIERLEQELQILLLPSDPHDNSNIYVEIRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE + ++ E +GE G K I G A+ +K E G HR+ R+ Sbjct: 129 GDLLRMYTRYAENQGWRVELQAESEGEHGGYKEVIARIIGQGAFSKMKFESGAHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ + P +D+ +I+ +D RIDT+RASGAGGQHVN TDSA+RITH Sbjct: 189 ETESQGRIHTSAATVAIMPEIDEVEAPDINPADLRIDTFRASGAGGQHVNKTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+ Q ERSQHKN+A+A + L++K+ + E K+ + + K+ +G G + Sbjct: 249 VPTGIVVESQAERSQHKNRARAMSQLQSKIIQGERDKQAQEQ--AATRKSLVGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ DV+ G L+ + ++ + Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKLDDVMGGGLEQVIDPLVSEYQ 349 >gi|331082607|ref|ZP_08331730.1| peptide chain release factor 1 [Lachnospiraceae bacterium 6_1_63FAA] gi|330400226|gb|EGG79868.1| peptide chain release factor 1 [Lachnospiraceae bacterium 6_1_63FAA] Length = 358 Score = 235 bits (599), Expect = 8e-60, Method: Composition-based stats. Identities = 115/351 (32%), Positives = 189/351 (53%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ + RL + + +P + + + LM+E+ L E ++ Sbjct: 1 MFDKLEDILVRLEEILNELNEPTVANDTARFQKLMKEQSELQPIADAYTEYKNCKETVED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 L + EE D + + + L K +E + L D + +E+ AGAGG Sbjct: 61 SLMMLDEESDEEMREMLKEELSDAKKRIEELEQELKILLLPKDPNDDKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY ++AE + ++TE L +++ G K T +I G AY LK E GV Sbjct: 121 DEAALFAAEIYRMYVKYAESQNWRTEMLSLNENGIGGFKEVTFMINGQGAYSKLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ + P + I+ E+ +DC+ D +RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTITVAIMP-EAEEIDFELDLNDCKFDVFRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V+ CQ E+SQ KNK +A +LR++LY++ELQKR + E+ ++++G Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYDMELQKRHD--AEAEARRSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++GD+ + + +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSIMNGDIQEVIDNLIAADQ 347 >gi|226315063|ref|YP_002774959.1| peptide chain release factor 1 [Brevibacillus brevis NBRC 100599] gi|254790866|sp|C0Z828|RF1_BREBN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|226098013|dbj|BAH46455.1| peptide chain release factor 1 [Brevibacillus brevis NBRC 100599] Length = 358 Score = 235 bits (599), Expect = 8e-60, Method: Composition-based stats. Identities = 113/347 (32%), Positives = 187/347 (53%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72 +R + DP + + + L +E+ L+ ++ +E + ++ D + Sbjct: 5 LSAVEERFEEVTNLLCDPDVISDTKRLRELSKEQSSLEETVTTYREYKSVVSQIDDAKAM 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LE L+++ +++ + L K ++E + + L D + +E+ AGG E+ Sbjct: 65 LEEKLDDEMREMVKLELNELSARKEQLEDRLKILLLPKDPNDEKNVIVEIRGAAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A +L RMYTR+AE+ FK E LE + G K + G AY +K E G HR+ Sbjct: 125 LFAAVLFRMYTRFAERNAFKIEVLEASPTDIGGYKEIVFSLSGRGAYSKMKFESGAHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ V P + +E+E+ E D RIDT+ +SGAGGQ VNTT SAVR Sbjct: 185 RIPATESGGRIHTSTATVLVLP-EAEDVEVEVHEKDIRIDTFCSSGAGGQSVNTTKSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTG++V CQ E+SQH NK +A +LRA+LY+ +Q++ A+ + K+ +G G Sbjct: 244 VTHIPTGIMVSCQDEKSQHSNKDKALRVLRARLYDFYMQQQNAEAD--ATRKSLVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + VL+G++D+ + + ++ Sbjct: 302 SERIRTYNY-PQSRVTDHRIGLTLHRLESVLEGEMDEVIDNLIMHEQ 347 >gi|241667458|ref|ZP_04755036.1| peptide chain release factor 2 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876005|ref|ZP_05248715.1| peptide chain release factor [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842026|gb|EET20440.1| peptide chain release factor [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 325 Score = 235 bits (599), Expect = 8e-60, Method: Composition-based stats. Identities = 169/324 (52%), Positives = 228/324 (70%), Gaps = 3/324 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 + ED +W N A+ L R++ L+N + + I + L + L L E+D S++QE Sbjct: 2 ELEDGSIWDNPEYAQNLGRQKVELENVVHNCEYISETLE--TLTELLELAEEDESLMQEI 59 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + + Q + E+E +F + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ Sbjct: 60 AKDTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK ++ DG+ AGIK TL ++G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKVEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QHKN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL +KDLRT Sbjct: 240 QHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIKDLRT 298 Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352 +E T+ VLDGDLD F++A+L Sbjct: 299 GVENTNTQAVLDGDLDKFIEASLK 322 >gi|220932633|ref|YP_002509541.1| peptide chain release factor 1 [Halothermothrix orenii H 168] gi|219993943|gb|ACL70546.1| peptide chain release factor 1 [Halothermothrix orenii H 168] Length = 358 Score = 235 bits (599), Expect = 8e-60, Method: Composition-based stats. Identities = 124/353 (35%), Positives = 190/353 (53%), Gaps = 15/353 (4%) Query: 13 LFDW----DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 +FD D V R + LN + DP + N + + L++E L +S +E + L Sbjct: 1 MFDLTKKLDKLVDRYNELNKEISDPDVINNSEQYQKLLKEHGKLKEIVSKYREYKKVLSR 60 Query: 69 NLILLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 + EE++ + + R + + + L D + +E+ AG Sbjct: 61 VEEAHSIIEEEEEQEVRELAEMELKELTPRKEKMEDELTYMLLPEDPNDEKNVIVEIRAG 120 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG E+ +A L RMY+R+AE + +KTE + + G K ++G N Y LK E Sbjct: 121 AGGDEAGLFAADLYRMYSRYAESKNWKTEVISANASGIGGYKEIIFTVEGKNVYSRLKYE 180 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ +S R HTS +++ V P + ++++I +D RID YR+SG GGQ VN Sbjct: 181 SGVHRVQRVPTTESGGRIHTSTATVAVLP-EAEEVDVDIDPNDLRIDVYRSSGPGGQSVN 239 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVRITH PTG+VV CQ E+SQHKNKA+A +LRA+L EL ++++ + E+ K+ Sbjct: 240 TTDSAVRITHEPTGLVVSCQDEKSQHKNKARAMRILRARLKELMEKEKQAEID--EARKS 297 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IG G +IR+Y P V D R N+ +D+LDG+LD + + Sbjct: 298 QIGSGDRSEKIRTYNF-PQGRVSDHRINLTIHQLNDILDGNLDLIIDNLIKED 349 >gi|170717669|ref|YP_001784745.1| peptide chain release factor 1 [Haemophilus somnus 2336] gi|189039976|sp|B0UUE6|RF1_HAES2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|168825798|gb|ACA31169.1| peptide chain release factor 1 [Haemophilus somnus 2336] Length = 360 Score = 235 bits (599), Expect = 8e-60, Method: Composition-based stats. Identities = 111/344 (32%), Positives = 184/344 (53%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R L + + + + + +E L++ + + L Sbjct: 9 LESLKERHEELEALLGESSVINDQDKFRAYSKEYAQLEDVVKCFARWNWLNNNIEETQLL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + + + + E + Q L D +AYLE+ AG GG E+ +A Sbjct: 69 LDDPDMKEMAELEIEESKAEIENAEQQLQILLLPKDPNDEYNAYLEIRAGTGGDEAGIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE ++++ E L ++ E+ G K + + G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESKRWRVEVLNANESEQGGYKEIIVKVNGEGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ EI+ SD RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 189 KTESQGRIHTSACTVAVMPELPENEMPEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++ + ++ + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKALSVLASRIAQAEQERQAQAQ--ADTRRNLLGSGDRSDK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +V++G +D+ ++ + + Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 349 >gi|254787712|ref|YP_003075141.1| peptide chain release factor 1 [Teredinibacter turnerae T7901] gi|259585256|sp|C5BSZ6|RF1_TERTT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|237684441|gb|ACR11705.1| peptide chain release factor 1 [Teredinibacter turnerae T7901] Length = 360 Score = 235 bits (599), Expect = 8e-60, Method: Composition-based stats. Identities = 110/346 (31%), Positives = 181/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +N V+R + DP + + + + L +E L+ + +E + + + L Sbjct: 9 LENLVERYDEVGALLGDPDIIADQKKFRDLGKEYSELEPVVICYQEYRTVIENIAEAKML 68 Query: 76 ALEEDDCSILQETSDNLQ---RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + +++ Q L D + +LE+ AG GG E+ Sbjct: 69 MNDGDADMREMAQEELKTAEAQLEPLETQLQKLLLPKDPNDEKNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AE+ ++ E + + GE G K + G Y LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAERAGWRIEIISENAGEHGGYKELITRVVGQGVYSQLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ + P D+S E+E+++ D RIDT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRIHTSACTVAIMPEADESEEVELNKGDLRIDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV+CQ ERSQHKN+A+A ++L A++ + ++ A K+ +G G Sbjct: 249 THIPTGIVVECQDERSQHKNRAKAMSLLAARINSAQAEQ--FAAEQASERKSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ ++++G LD+ ++ + + Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLDEIMEGSLDEVIQPLVNEHQ 351 >gi|119472532|ref|ZP_01614580.1| Peptide chain release factor 1 (RF-1) [Alteromonadales bacterium TW-7] gi|119444856|gb|EAW26156.1| Peptide chain release factor 1 (RF-1) [Alteromonadales bacterium TW-7] Length = 361 Score = 235 bits (599), Expect = 8e-60, Method: Composition-based stats. Identities = 119/346 (34%), Positives = 183/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72 + V+R + DP + + + L +E L+ + Q D + Sbjct: 9 LETLVERYEEVQALLSDPSVISDQNRFRGLSKEYSELEEIVKTFLAYQQTKEDLASAEEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L+ + + +E + +I + Q L D+N+ +LEV AG GG E+ Sbjct: 69 LKDSDPDMREMAQEEYKEAKAQILSLEDEIQVLMLPKDPKDNNNVFLEVRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE +K+K E + ++GE G K I G YG LK E GVHR+ R Sbjct: 129 FAGDLFRMYSRFAETQKWKLEVVTTNEGEHGGYKEVIANISGEGVYGKLKFESGVHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V + ++ IEI+ +D ++DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRVHTSACTVAVMAEIPEAEAIEINTADIKVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTGVVV+CQ ERSQHKN+A+A ++L A+L + E +KR A + +G G Sbjct: 249 THLPTGVVVECQDERSQHKNRAKAMSVLAARLQQAEDEKR--HAAEASERRNLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ ++V+ GDL + + + Sbjct: 307 ERIRTYNY-PQGRITDHRINLTLYRLNEVVAGDLGAIVDPLMQEHQ 351 >gi|161621297|ref|YP_585342.2| peptide chain release factor 1 [Cupriavidus metallidurans CH34] gi|119361586|sp|Q1LIF3|RF1_RALME RecName: Full=Peptide chain release factor 1; Short=RF-1 Length = 360 Score = 235 bits (599), Expect = 8e-60, Method: Composition-based stats. Identities = 119/344 (34%), Positives = 176/344 (51%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +RL +N N+ + + L RE L + + D L Sbjct: 9 LDQLAERLDEVNALLAREDATANMDQYRKLSREHAELSPVAEQYGQYRQAQDDLATAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + D + + Q L D + LE+ AG GG ES +A Sbjct: 69 LDDPEMKEFAADEIDAARERLQSLENSLQTLLLPKDPNDDRNLLLEIRAGTGGEESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE+R+++ E + + G K + I G A+ LK E G HR+ R+ Sbjct: 129 ADLLRMYTRYAERRRWQVEIMSESPSDLGGYKEVIVRIAGDAAFSRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P D+ E+EI+ SD R+DT+RASGAGGQHVN TDSAVR+TH Sbjct: 189 ATESQGRIHTSACTVAVMPEADEVGEVEINPSDLRVDTFRASGAGGQHVNKTDSAVRLTH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQH+NK +A +L A++ +++L R A + + IG G + Sbjct: 249 LPTGIVVECQDDRSQHRNKEKAMKVLAARIKDMQL--RAAQAKEANTRRNLIGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ ++DGDLD+ + A A + Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKIDMIMDGDLDELISALSAEHQ 349 >gi|157738274|ref|YP_001490958.1| peptide chain release factor 2 [Arcobacter butzleri RM4018] gi|315636563|ref|ZP_07891799.1| peptide chain release factor RF2 [Arcobacter butzleri JV22] gi|166977372|sp|A8EWG5|RF2_ARCB4 RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|157700128|gb|ABV68288.1| peptide chain release factor 2 [Arcobacter butzleri RM4018] gi|315479212|gb|EFU69909.1| peptide chain release factor RF2 [Arcobacter butzleri JV22] Length = 365 Score = 235 bits (599), Expect = 8e-60, Method: Composition-based stats. Identities = 162/344 (47%), Positives = 224/344 (65%), Gaps = 2/344 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 + G+ D +RL + + W +V A + E+ + ++ + D L Sbjct: 20 IKGILKPDILNKRLEEIKNEEASQDFWNDVENATKIGIEKNRILGKLNKFNKAFDSLTGT 79 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L E+A E D L+ + ++ ++ + +LS DS++A + +H GAGGTE Sbjct: 80 NELYEMATAEKDDETLEMLYEEASDLENLIKSTEISVMLSNPDDSSNAIVSIHPGAGGTE 139 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 SQDWA++L RMY RWAE+ FK E L+ G+EAGIK + +IKG NAYG++K E G+HR Sbjct: 140 SQDWASILYRMYLRWAERNDFKVELLDYQAGDEAGIKDVSFIIKGENAYGYMKAENGIHR 199 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+DSN++RHTSFSS+ V P +DD+I I I + D RIDTYRASGAGGQHVN T+SA Sbjct: 200 LVRISPFDSNAKRHTSFSSVMVSPEIDDNINIVIEDKDIRIDTYRASGAGGQHVNKTESA 259 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 +RITHIPTG+VVQCQ +RSQHKNK A+ ML+++LYE EL+K+ + E K++ GWG Sbjct: 260 IRITHIPTGIVVQCQNDRSQHKNKDSAFKMLKSRLYEYELEKQRASKDGIE--KSDNGWG 317 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIRSYVLQPYQ VKD R+NI ++ +LDGD+ ++ L Sbjct: 318 HQIRSYVLQPYQQVKDSRSNIGYSNVDAILDGDITKMIEDVLIA 361 >gi|308233692|ref|ZP_07664429.1| peptide chain release factor 2 [Atopobium vaginae DSM 15829] gi|328943371|ref|ZP_08240836.1| peptide chain release factor RF2 [Atopobium vaginae DSM 15829] gi|327491340|gb|EGF23114.1| peptide chain release factor RF2 [Atopobium vaginae DSM 15829] Length = 375 Score = 235 bits (599), Expect = 8e-60, Method: Composition-based stats. Identities = 140/354 (39%), Positives = 195/354 (55%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++ +G + + L + + W + A +M + L ++ Sbjct: 16 ELEQRCEQVGMYLHINELRSHVDKLTVQAGETTFWNDAAHATEVMAQLGALKEKLNQYDS 75 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLE 120 L D ELA + + L V + + + E D+ A + Sbjct: 76 AYKLLLDVQAAFELADTSSQDDEMLIEAKRLANKLTNVLDNLELNTWFNDEFDTGAAIVT 135 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + G GG E+QDW +ML +MY + E++ + + + GE GI AT + G NAYG Sbjct: 136 ITPGQGGLEAQDWCDMLFKMYLHYCERKSWTVDINDAPVGEVIGIDRATFTVTGKNAYGM 195 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ EQGVHRLVRISP D+ RR T+F+ + V PV+ +IE++I D RID Y ASG GG Sbjct: 196 LRAEQGVHRLVRISPTDAKKRRQTTFAGVEVLPVLPQTIEVQIDTQDIRIDVYHASGPGG 255 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTTDSAVRITHIPTG+VV CQ ERSQ +NKA A +LR+KLYELE Q+REE + Sbjct: 256 QGVNTTDSAVRITHIPTGIVVTCQNERSQLQNKAAAMQILRSKLYELEKQRREEELDDLR 315 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAI 353 K +I WG QIR+Y+L P+Q+VKD RT +E + VL +GDLD F+ A Sbjct: 316 GPKHDISWGNQIRNYILYPFQLVKDTRTQVETGNVDAVLQEGDLDQFIIAYHRW 369 >gi|209885116|ref|YP_002288973.1| peptide chain release factor 2 [Oligotropha carboxidovorans OM5] gi|209873312|gb|ACI93108.1| peptide chain release factor 2 [Oligotropha carboxidovorans OM5] Length = 322 Score = 235 bits (599), Expect = 8e-60, Method: Composition-based stats. Identities = 203/309 (65%), Positives = 246/309 (79%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L+N + I + L D + L+EL E+D +++ E L +K +V ++ E Sbjct: 1 MQERTSLENQLGGIGRTERELEDQIGLIELGEAENDAAVVAEAEAALAALKKDVARQELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D YLEVHAGAGGTESQDWA+MLLRMYTRWAE++ FK E LE GEEAGI Sbjct: 61 ALLSGEADRFDTYLEVHAGAGGTESQDWASMLLRMYTRWAERKGFKVEFLEETQGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G NAYGWLK E GVHRLVRISPYDSN+RRHTSFSSI ++PVVD+SI+I+I+E Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPYDSNARRHTSFSSIAIFPVVDNSIKIDINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ RSQHKN+AQAW+MLRA+LY Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KREE A +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ + S VLDGDLD+ Sbjct: 241 EIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300 Query: 346 FMKATLAIK 354 FM ATLA K Sbjct: 301 FMAATLAQK 309 >gi|257125766|ref|YP_003163880.1| peptide chain release factor 2 [Leptotrichia buccalis C-1013-b] gi|257049705|gb|ACV38889.1| bacterial peptide chain release factor 2 (bRF- 2) [Leptotrichia buccalis C-1013-b] Length = 364 Score = 235 bits (599), Expect = 9e-60, Method: Composition-based stats. Identities = 161/345 (46%), Positives = 221/345 (64%), Gaps = 2/345 (0%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 D +N + L +T +P W N ++ +++ + + D Sbjct: 21 RRHLDLENLKIEIENLEKQTFEPDFW-NAENSQEILKNISAKKKMLEEYDNLNGLFEDVS 79 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 ++E D+ + ++++ E++ + + LL E D+N+A L +++GAGGTE+ Sbjct: 80 TIIEFIEMGDNSFENE-LEQKAKKLENEIDNFKTKLLLDEEYDTNNAILTINSGAGGTEA 138 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA ML RMY RWA + FK E L+ GEEAGIKS TL IKG AYG+LKGE+GVHRL Sbjct: 139 CDWAEMLYRMYDRWANRHNFKVEVLDSLAGEEAGIKSITLNIKGSYAYGYLKGEKGVHRL 198 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+DSN+RRHTSF+++ V P ++D +EI I D +IDTYRASGAGGQHVNTTDSAV Sbjct: 199 VRISPFDSNARRHTSFAAVNVTPEIEDDVEINIRTEDLKIDTYRASGAGGQHVNTTDSAV 258 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIPT VV CQ ERSQ KN+ A +L++KL+ELEL+KRE+ + ++++I WG Sbjct: 259 RITHIPTNTVVTCQNERSQLKNRETAMKILKSKLFELELEKREKEMAELKGTESKIEWGS 318 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 QIRSYV QPY+MVKD RT E+ + V+DGD+D F+ L K Sbjct: 319 QIRSYVFQPYKMVKDHRTKAEEGNVEKVMDGDIDLFINEYLKYSK 363 >gi|227355360|ref|ZP_03839761.1| peptide chain release factor 1 [Proteus mirabilis ATCC 29906] gi|227164584|gb|EEI49455.1| peptide chain release factor 1 [Proteus mirabilis ATCC 29906] Length = 360 Score = 235 bits (599), Expect = 9e-60, Method: Composition-based stats. Identities = 118/337 (35%), Positives = 179/337 (53%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + + + + + L +E L + S ++ + D + Sbjct: 9 LEALQERYEEIQALLAEADVIASQERFRALSKEYAQLTDVTSCYRQWRKVQDDMEAAEMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE + + Q L D + +LE+ AG GG E+ +A Sbjct: 69 LDDPEMKEMAQEELKEAQSVNEELEQQLQVLLLPKDPDDEFNCFLEIRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + ++GE G K + G AYG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRIEVMNANEGEHGGYKEIIAKVIGDGAYGVLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P V ++ EIS SD RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVLPEVPEAELPEISPSDLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR+E + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVQKRQE--AEASERRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 IR+Y P V D R N+ +V++G LD ++ Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDALIQ 342 >gi|319405668|emb|CBI79291.1| peptide chain release factor RF-2 [Bartonella sp. AR 15-3] Length = 332 Score = 235 bits (599), Expect = 9e-60, Method: Composition-based stats. Identities = 216/320 (67%), Positives = 266/320 (83%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94 LW + +A+ +MRERQ+L+++++ + RL + + L+ + EE+D I+ ET + +++ Sbjct: 2 LWNDAQKAQDMMRERQNLEDSMNSTQLFAQRLEECIELIAMGEEENDVGIIAETENTIRQ 61 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 +K E++ +Q E LLSGEADSND YLE+HAGAGGTESQDWA+MLLRMYTRWAE+ K K E Sbjct: 62 LKSEIDKRQIEMLLSGEADSNDTYLEIHAGAGGTESQDWASMLLRMYTRWAEQHKMKVEV 121 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 LE HDGEEAGIKSAT+L+KG NAYG LK E GVHRLVRISPYDSNS+RHTSF+SIWVYPV Sbjct: 122 LETHDGEEAGIKSATILVKGHNAYGLLKTESGVHRLVRISPYDSNSKRHTSFASIWVYPV 181 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 VD++IE+++SE+D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A Sbjct: 182 VDENIEVDLSEADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRA 241 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 AW+MLRA+LYE EL+KREE N E+SKTEIGWG QIRSYVLQPYQ+VKD RT +E T Sbjct: 242 TAWSMLRARLYEEELKKREEETNAVEASKTEIGWGHQIRSYVLQPYQLVKDSRTGLENTD 301 Query: 335 PSDVLDGDLDDFMKATLAIK 354 P VL+GDLD F++A LA + Sbjct: 302 PQTVLNGDLDAFIEAALAQR 321 >gi|260589191|ref|ZP_05855104.1| peptide chain release factor 1 [Blautia hansenii DSM 20583] gi|260540272|gb|EEX20841.1| peptide chain release factor 1 [Blautia hansenii DSM 20583] Length = 358 Score = 235 bits (599), Expect = 9e-60, Method: Composition-based stats. Identities = 115/351 (32%), Positives = 189/351 (53%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ + RL + + +P + + + LM+E+ L E ++ Sbjct: 1 MFDKLEDILVRLEEILNELNEPTVANDTARFQKLMKEQSELQPIADAYTEYKNCKETVED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 L + EE D + + + L K +E + L D + +E+ AGAGG Sbjct: 61 SLMMLDEESDEEMREMLKEELSDAKKRIEELEQELKILLLPKDPNDDKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY ++AE + ++TE L +++ G K T +I G AY LK E GV Sbjct: 121 DEAALFAAEIYRMYVKYAESQNWRTEMLSLNENGIGGFKEVTFMINGQGAYSKLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ + P + I+ E+ +DC+ D +RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTITVAIMP-EAEEIDFELDLNDCKFDVFRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V+ CQ E+SQ KNK +A +LR++LY++ELQKR + E+ ++++G Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYDMELQKRHD--AEAEARRSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++GD+ + + +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSIMNGDIQEIIDNLIAADQ 347 >gi|56476056|ref|YP_157645.1| peptide chain release factor 1 [Aromatoleum aromaticum EbN1] gi|81598974|sp|Q5P7G7|RF1_AZOSE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|56312099|emb|CAI06744.1| peptide chain release factor 1 (RF-1) [Aromatoleum aromaticum EbN1] Length = 359 Score = 235 bits (599), Expect = 9e-60, Method: Composition-based stats. Identities = 118/345 (34%), Positives = 186/345 (53%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + RL+ L+ + +++ + L RER ++ ++ + D + Sbjct: 9 LELLTHRLAELDRELSSGDAVRDMDGFRSLGRERAEIEPVVALYGAYRQAEADCESARAM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGAGGTESQDW 133 + + L E+ ++L+ + + L +D + +LEV AG GG E+ + Sbjct: 69 LADAE-MRELAESELETGAVRLQALEAELQCALLPCDPSDERNLFLEVRAGTGGDEASLF 127 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A LLRMYTR+AE++++K E + + G K L I G AY LK E G HR+ RI Sbjct: 128 AGDLLRMYTRYAERQRWKVEIVSSSPSDLGGYKEVILRIAGAGAYSKLKFESGGHRVQRI 187 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 ++ R HTS ++ V P D+ + I+ +D RIDT+RASGAGGQH+N TDSAVRIT Sbjct: 188 PVTETQGRIHTSACTVAVMPEADEVEAVNINPADLRIDTFRASGAGGQHINKTDSAVRIT 247 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H+PTG+VV+CQ +RSQH+N+AQA ++L A++ + +L RE+ A + K+ +G G Sbjct: 248 HLPTGIVVECQDDRSQHRNRAQAMSVLAARIQDRQL--REQQAREAATRKSLVGSGDRSE 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+ GDLD+ + A + Sbjct: 306 RIRTYNY-PQGRVTDHRINLTLYKLDAVMQGDLDELVDALTREHQ 349 >gi|114704660|ref|ZP_01437568.1| peptide chain release factor 2 protein [Fulvimarina pelagi HTCC2506] gi|114539445|gb|EAU42565.1| peptide chain release factor 2 protein [Fulvimarina pelagi HTCC2506] Length = 321 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 213/309 (68%), Positives = 253/309 (81%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQHL+ I+ I+E++ + +N+ L+ + EE D I+ E L+ ++ + +Q E Sbjct: 1 MRERQHLETNITAIRELESAVEENVELIAMGEEEGDGEIVSEAEATLKTLQTDAAKRQIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEADSND Y+EVH+GAGGTESQDWA+ML RMY RWAE+ FK E LE GEEAGI Sbjct: 61 TLLSGEADSNDTYMEVHSGAGGTESQDWASMLQRMYIRWAERANFKVEVLEEQGGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KS TLLIKG NAYGW K E GVHRLVRISPYDS +RRHTSF+S+WVYPVVDD+I+IE++E Sbjct: 121 KSTTLLIKGHNAYGWAKTESGVHRLVRISPYDSQARRHTSFASVWVYPVVDDTIDIEVNE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD RIDTYRASGAGGQHVNTTDSAVRITHI TG+VV CQQERSQHKN+A AWNML+A+LY Sbjct: 181 SDVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVACQQERSQHKNRATAWNMLKARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KRE AN +SKT+IGWG QIRSYVLQPYQ+VKDLRT IE TSP DVLDG+LD+ Sbjct: 241 EAELEKREAEANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGIESTSPQDVLDGELDE 300 Query: 346 FMKATLAIK 354 FM+A LA + Sbjct: 301 FMEAALAHR 309 >gi|315634081|ref|ZP_07889370.1| peptide chain release factor RF1 [Aggregatibacter segnis ATCC 33393] gi|315477331|gb|EFU68074.1| peptide chain release factor RF1 [Aggregatibacter segnis ATCC 33393] Length = 360 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 116/344 (33%), Positives = 183/344 (53%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ +R L D + + + + +E L++ + + L Sbjct: 9 LDSLKERYEELEALLGDASVISDQDKFRAYSKEYSQLEDVVKSFSRWNQLNANLEEAQLL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q + + +VE Q L D + YLE+ AG GG E+ +A Sbjct: 69 LDDPEMKEMAQMEIEESKAELEQVEQHLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE ++++ E L ++ E+ G K L+ G AYG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAETKRWRIEVLSENESEQGGFKEIIALVSGDGAYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ SD RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPSDLRIDTYRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+VV+CQ ERSQHKNKA+A ++L ++L ++ ++ + ++ + +G G + Sbjct: 249 IPTGMVVECQDERSQHKNKAKALSVLASRL--VQQEQEKLEQEQADTRRNLLGSGDRSDK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +V++G +DD ++ + + Sbjct: 307 IRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDDLIQPIITEYQ 349 >gi|197284958|ref|YP_002150830.1| peptide chain release factor 1 [Proteus mirabilis HI4320] gi|238693176|sp|B4EVR7|RF1_PROMH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|194682445|emb|CAR42344.1| peptide chain release factor 1 [Proteus mirabilis HI4320] Length = 360 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 118/337 (35%), Positives = 179/337 (53%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + + + + + L +E L + S ++ + D + Sbjct: 9 LEALQERYEEIQALLAEADVIASQERFRALSKEYAQLTDITSCYRQWRKVQDDMEAAEMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE + + Q L D + +LE+ AG GG E+ +A Sbjct: 69 LDDPEMKEMAQEELKEAQSVNEELEQQLQVLLLPKDPDDEFNCFLEIRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + ++GE G K + G AYG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRIEVMNANEGEHGGYKEIIAKVIGDGAYGVLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P V ++ EIS SD RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVLPEVPEAELPEISPSDLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR+E + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVQKRQE--AEASERRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 IR+Y P V D R N+ +V++G LD ++ Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDALIQ 342 >gi|150015324|ref|YP_001307578.1| peptide chain release factor 2 [Clostridium beijerinckii NCIMB 8052] gi|149901789|gb|ABR32622.1| peptide chain release factor 2 [Clostridium beijerinckii NCIMB 8052] Length = 324 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 147/325 (45%), Positives = 213/325 (65%), Gaps = 1/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ++ W N+ +A+ + ++ + + + I +++ ++ D +L E+ ++D+ S + Sbjct: 1 MQESGFWDNIKKAEEVTKKSKSIKDKIESFDKLKSQIEDIEVLKEIMEDDDEESANEIIQ 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 I+ +++ + LL GE D N+A L +H G GGT++ DW MLLRMYTRW EK+ Sbjct: 61 TLRD-IQAQIDDYNMKVLLCGEYDKNNAILTLHVGVGGTDANDWTEMLLRMYTRWCEKQG 119 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + E L++ G+EAGIKS TL + G AYG+LK E+G+HRLVRISPY++N +R TSF+S+ Sbjct: 120 YSIETLDLLPGDEAGIKSVTLKVTGEYAYGYLKAEKGIHRLVRISPYNANGKRQTSFASM 179 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + +IEI D +IDTYR+ GAGGQHVN TDSAVRITHIPTGVVVQCQ ERSQ Sbjct: 180 EVLPELTKEQDIEIRSDDLKIDTYRSGGAGGQHVNKTDSAVRITHIPTGVVVQCQNERSQ 239 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 N+ A ML++KL EL+ + +E ++GWG QIRSYV PY MVKD RTN Sbjct: 240 FSNRDTAMEMLKSKLVELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRTN 299 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 +E ++ + V+DG++D F+ A L + Sbjct: 300 VETSNVTSVMDGEIDMFINAYLKQQ 324 >gi|150015294|ref|YP_001307548.1| peptide chain release factor 1 [Clostridium beijerinckii NCIMB 8052] gi|189039964|sp|A6LQG2|RF1_CLOB8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|149901759|gb|ABR32592.1| peptide chain release factor 1 [Clostridium beijerinckii NCIMB 8052] Length = 360 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 120/347 (34%), Positives = 187/347 (53%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L+ K DP + QN E + L +E L+ ++ +E + + D E+ Sbjct: 6 LEFIENKYDELSVKISDPSIMQNQNEWRKLCKEHADLEVIVNSYREYKKVVEDLKANKEM 65 Query: 76 ALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + ++ R + Q L D + ++E+ GAGG E+ Sbjct: 66 LSGESDKEMREMLNEEITDLTNREEQLETEIQILLLPKDPNDDKNVFVEIRGGAGGEEAA 125 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYTR+AE +++ E + +++ + G K +IKG AY LK E GVHR+ Sbjct: 126 LFAYNLFRMYTRYAETQRWGVEIMSLNETDLGGFKEVVFMIKGNGAYSKLKYESGVHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S+ R HTS +++ V P D +EIE+++ D RID +RASG GGQ VNTTDSAVR Sbjct: 186 RVPDTESSGRIHTSTATVAVLP-EVDDVEIEVADKDVRIDVFRASGNGGQCVNTTDSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV CQ E+SQ KNK +A +L+++LY E +RE I E K+++G G Sbjct: 245 ITHLPTGLVVSCQDEKSQLKNKEKAMKVLKSRLY--EQAERERAQGIAEDRKSQVGTGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + L GD+D+ + A + + Sbjct: 303 SERIRTYNY-PQGRITDHRIGLTLYKLDTFLGGDIDEMINALITADQ 348 >gi|34495535|ref|NP_899750.1| peptide chain release factor 1 [Chromobacterium violaceum ATCC 12472] gi|46576724|sp|Q7P1Y2|RF1_CHRVO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|34101390|gb|AAQ57759.1| peptide chain release factor I [Chromobacterium violaceum ATCC 12472] Length = 358 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 111/344 (32%), Positives = 172/344 (50%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 RL + Q++ K L RE L + + D ++ Sbjct: 9 LAQLADRLEEVTHLLASETATQDMEAFKKLTREHAELTPVVETFSAYRQCEGDIAAAEDM 68 Query: 76 ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + Q + + Q L D + +LE+ AG GG E+ +A Sbjct: 69 LADPEMKEFAQAEIAEGKDKLEALDLELQKLLLPKDPNDDKNIFLEIRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE+ +++ E + + + G K + + G AY LK E G HR+ R+ Sbjct: 129 ADLLRMYTRYAERNRWQVEIVSASESDLGGYKEVIVRLVGQGAYSRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V D+ E+ ++ +D RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 189 ATETQGRIHTSACTVAVMAEADEIAEVVLNPADLRIDTFRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+V +CQ RSQH NKA A +L A++Y+++L+++ + K+ IG G + Sbjct: 249 IPTGIVAECQDGRSQHANKASAMQVLAARIYDIQLREKNQ--KEAAERKSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ V+DGDL + A +A ++ Sbjct: 307 IRTYNY-PQGRITDHRINLTLYKLDYVMDGDLAELTDALIAEQQ 349 >gi|53804790|ref|YP_113526.1| peptide chain release factor 1 [Methylococcus capsulatus str. Bath] gi|61214591|sp|Q60A21|RF1_METCA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|53758551|gb|AAU92842.1| peptide chain release factor 1 [Methylococcus capsulatus str. Bath] Length = 360 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 118/346 (34%), Positives = 178/346 (51%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +N R + P + + K L RE L+ ++ + ++ L L Sbjct: 9 LENLSHRFEEITGLLATPEVQNDQNRFKALSREYAQLEPCVACFRRYRETLEGLDHAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEV---EYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + K + Q L D + +LEV AG GG E+ Sbjct: 69 LQDPDPEVRSLAREELETGRKRCDALEQELQILLLPRDPNDERNVFLEVRAGTGGAEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE++ ++ E + +GE G K + I G N Y LK E G HR+ R Sbjct: 129 FAGDLQRMYSRYAERQGWRAEIVSESEGEHGGYKEVVMRISGQNVYSRLKFEAGTHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ + P DD +EI+I+ +D RIDT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPTTEAQGRIHTSACTVAILPEFDD-VEIDINPADLRIDTFRASGAGGQHVNRTDSAIRI 247 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG VV+CQ ERSQHKN+A+A ++L+A++ +K+ I S K ++G G Sbjct: 248 THIPTGTVVECQDERSQHKNRARAMSLLQARILAAAQEKQNSE--IAASRKLQVGSGDRS 305 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ +++GDLD + L + Sbjct: 306 ERIRTYNF-PQGRLTDHRINLTIYRLDAIMEGDLDPVIDPLLQEHQ 350 >gi|331270451|ref|YP_004396943.1| peptide chain release factor 1 [Clostridium botulinum BKT015925] gi|329127001|gb|AEB76946.1| peptide chain release factor 1 [Clostridium botulinum BKT015925] Length = 357 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 119/351 (33%), Positives = 196/351 (55%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D D + L+ K DP + N E + L +E L+ ++ +E ++ + + Sbjct: 1 MLDKLDFTENKYEELSIKISDPSVMANQNEWRKLCKEHAELETIVTKYREYKNNKEELVA 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 EL EE+D + + + ++ ++ + + L D + ++E+ AGAGG Sbjct: 61 NKELLSEENDRDMKEMIQEEIKTLEESIVSDEEELKILLLPKDPNDDKNVFIEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR+AE+ +KTE + ++ + G K +++G +AY +K E GV Sbjct: 121 DEAALFAANLFRMYTRYAERHGWKTELMSANETDIGGFKEVVFMLRGDSAYSKMKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S+ R HTS +++ V P D ++I+I +D RID +RASG GGQ VNTTD Sbjct: 181 HRVQRVPDTESSGRIHTSTATVAVLP-EVDDVDIQIDPNDIRIDVFRASGHGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+VV CQ E+SQ KNK +A +L+A+LYE +R A+I K+++G Sbjct: 240 SAVRMTHIPTGIVVSCQDEKSQLKNKEKALKVLKARLYEKAEAER--AASISADRKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V + R + LDGD+++ + A + ++ Sbjct: 298 TGDRSERIRTYNY-PQGRVTEHRIGVTLYKLDAFLDGDMEEIIDALITAEQ 347 >gi|56707356|ref|YP_169252.1| peptide chain release factor 2 [Francisella tularensis subsp. tularensis SCHU S4] gi|110669826|ref|YP_666383.1| peptide chain release factor 2 [Francisella tularensis subsp. tularensis FSC198] gi|224456424|ref|ZP_03664897.1| peptide chain release factor 2 [Francisella tularensis subsp. tularensis MA00-2987] gi|254370940|ref|ZP_04986945.1| peptide chain release factor 2 [Francisella tularensis subsp. tularensis FSC033] gi|254874190|ref|ZP_05246900.1| peptide chain release factor 2 [Francisella tularensis subsp. tularensis MA00-2987] gi|54112809|gb|AAV29038.1| NT02FT0149 [synthetic construct] gi|56603848|emb|CAG44824.1| peptide chain release factor 2 [Francisella tularensis subsp. tularensis SCHU S4] gi|110320159|emb|CAL08207.1| peptide chain release factor 2 [Francisella tularensis subsp. tularensis FSC198] gi|151569183|gb|EDN34837.1| peptide chain release factor 2 [Francisella tularensis subsp. tularensis FSC033] gi|254840189|gb|EET18625.1| peptide chain release factor 2 [Francisella tularensis subsp. tularensis MA00-2987] Length = 325 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 165/324 (50%), Positives = 221/324 (68%), Gaps = 3/324 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 + ED +W N A+ L +++ L+N + + I + L LLEL E++ Sbjct: 2 ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELGEEDESLMQEIAK 61 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++ E +F + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ Sbjct: 62 DTQNVASEI--EKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK ++ DG+ AGIK TL I+G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS Sbjct: 180 VFISPEVDDDIDIEINPTDLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QHKN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL +KDLRT Sbjct: 240 QHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIKDLRT 298 Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352 +E T+ VLDGDLD F++A+L Sbjct: 299 GVENTNTQAVLDGDLDKFIEASLK 322 >gi|299133776|ref|ZP_07026970.1| peptide chain release factor 2 [Afipia sp. 1NLS2] gi|298591612|gb|EFI51813.1| peptide chain release factor 2 [Afipia sp. 1NLS2] Length = 322 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 201/309 (65%), Positives = 248/309 (80%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L+N + I + L D + ++EL E+D +++ E + L+ +K +V ++ E Sbjct: 1 MQERTSLENQLGGIGRTERELEDQIGMIELGEAENDEAVVTEAENALKALKKDVARQELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D YLEVHAGAGGTESQDWA+MLLRMYTRWAE++ FK E LE GEEAGI Sbjct: 61 ALLSGEADKFDTYLEVHAGAGGTESQDWASMLLRMYTRWAERKGFKVEYLEETQGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G NAYGWLK E GVHRLVRISPYDSN+RRHTSFSSI ++PVVD+SI+I+I+E Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPYDSNARRHTSFSSIAIFPVVDNSIKIDINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ RSQHKN+AQAW+MLRA+LY Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KREE A +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ + S VLDGDLD+ Sbjct: 241 EIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300 Query: 346 FMKATLAIK 354 FM ATLA + Sbjct: 301 FMAATLAQR 309 >gi|212711979|ref|ZP_03320107.1| hypothetical protein PROVALCAL_03055 [Providencia alcalifaciens DSM 30120] gi|212685501|gb|EEB45029.1| hypothetical protein PROVALCAL_03055 [Providencia alcalifaciens DSM 30120] Length = 360 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 116/340 (34%), Positives = 177/340 (52%), Gaps = 7/340 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L +E L + + D L Sbjct: 9 LEALQERYEEIEAHLADAGVIADQDRFRALSKEYAQLTDVAKCFTAWRTVQDDIETAQML 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE +R + + Q L D + ++E+ AGAGG E+ +A Sbjct: 69 LDDPEMKEMAQEELKEAKERNEELEQQLQLLLLPKDPDDEYNCFVEIRAGAGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE +++ E + DGE G K I G + YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESNRWRVELMSTSDGEHGGYKEVIAKISGDSVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +I + P + ++ EIS +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTIAILPELPEAELPEISPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ + E+ KR A + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKAMSVLGARIRQAEMDKR--HAAEASERRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IR+Y P V D R N+ +V++G LD ++ + Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDTLIQPII 345 >gi|187917953|ref|YP_001883516.1| peptide chain release factor 2 [Borrelia hermsii DAH] gi|119860801|gb|AAX16596.1| bacterial peptide chain release factor 2 [Borrelia hermsii DAH] Length = 353 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 147/350 (42%), Positives = 221/350 (63%), Gaps = 4/350 (1%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 ++ GG FD D +L + + + W + +A+ +++ + L I +++ Sbjct: 5 KKFKMSGGSFDKDKLKTQLKEYEKQINNENFWNDNKKAQEILKNQNILKAKIEPWEDLIF 64 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 +L D L E+A E+D +L + + L+ + S + D ++A+L +H+G Sbjct: 65 KLQDLRELCEIAESEEDTILLDKDINKLKEQYKHLLTI---SYFKEDIDISNAFLTIHSG 121 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGGTE+ DW +ML R+Y R++E+R +KTE +++ + E GIKS T+ IKG AYG+LK E Sbjct: 122 AGGTEACDWVSMLYRIYLRYSERRGYKTELIDLLEAE-GGIKSVTIEIKGKYAYGFLKSE 180 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G+HRLVRISP+D+ +RHTSF+S+++ PV+DD IEI I D R+DTYRASGAGGQHVN Sbjct: 181 IGIHRLVRISPFDAAKKRHTSFASVFIDPVIDDKIEIIIKPEDIRVDTYRASGAGGQHVN 240 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T SAVRITH+ TG+V Q Q +RSQH+NK A +L++KLYE ++ + + K Sbjct: 241 KTSSAVRITHLQTGIVTQSQTDRSQHRNKELAMKVLKSKLYEHYKALEQQKSKSKQEEKK 300 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +I WG QIRSY+ QPY +VKD RT E + V+DG++D+F++ L K Sbjct: 301 DISWGNQIRSYIFQPYTLVKDHRTKFENPNIISVMDGNIDNFIEEYLKWK 350 >gi|158521778|ref|YP_001529648.1| peptide chain release factor 2 [Desulfococcus oleovorans Hxd3] gi|158510604|gb|ABW67571.1| peptide chain release factor 2 [Desulfococcus oleovorans Hxd3] Length = 337 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 160/334 (47%), Positives = 221/334 (66%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 +RL+ + W + A L++ER L + + + E+ + D +LLELA E Sbjct: 1 MRERLAEIEALVAREGAWDDPERAATLLKERSLLSDRLDLLSELGREVEDAEVLLELAEE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D E + ++ ++ ++E + LS E D DA + ++AGAGGT++QDWA ML Sbjct: 61 EADSDAAAEVTRRVEGVRKKIEKLSIDLTLSDEDDPADAIVAINAGAGGTDAQDWAEMLF 120 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTRW E++ +K E ++ G+EAGIKSAT KG NA+G+LK E GVHRLVRISP+++ Sbjct: 121 RMYTRWIERKGYKLEMIDHQPGDEAGIKSATFSAKGLNAFGYLKNESGVHRLVRISPFNA 180 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 + +R TSF+S++V+P +D I+I+I E D RIDT+RASGAGGQHVN T SAVRITH P+G Sbjct: 181 SGKRQTSFASVFVFPQIDRQIDIDIDEKDLRIDTFRASGAGGQHVNKTSSAVRITHYPSG 240 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 VVVQCQQERSQ +N+ A +LRA+LY+LE K+ + E+ K +I WG QIRSY L Sbjct: 241 VVVQCQQERSQLRNREIAMAVLRARLYKLEKDKQNQKLQDMEAGKDDIAWGSQIRSYFLH 300 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 PYQ KD RT+ E VLDG++D F++A L Sbjct: 301 PYQKAKDHRTDFEIGDVYSVLDGEIDPFIEAVLM 334 >gi|256821856|ref|YP_003145819.1| peptide chain release factor 1 [Kangiella koreensis DSM 16069] gi|256795395|gb|ACV26051.1| peptide chain release factor 1 [Kangiella koreensis DSM 16069] Length = 364 Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats. Identities = 116/346 (33%), Positives = 182/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 V R ++ DP + + + + L +E L+ ++ + ++ E+ Sbjct: 10 LQGLVDRHEEISALLGDPDVIGDQNKFRDLSKEYSQLEEVVNTFQRYEEAEESLKAAEEM 69 Query: 76 ALEEDDCSILQETSDNLQ---RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 +ED + +I+L Q L D + +LE+ AG GG E+ Sbjct: 70 LKDEDPDMREMAQEELKDAKGQIELLEVEMQKLLLPRDPNDDKNTFLEIRAGTGGDEAAI 129 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AEK++++ E + DGE G K + I G + Y LK E G HR+ R Sbjct: 130 FAGDLFRMYSKYAEKKRWQVEVISQSDGEHGGYKEIIVRISGDSVYSHLKFESGAHRVQR 189 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI+ +D +IDT+RASGAGGQHVN TDSA+RI Sbjct: 190 VPETESQGRIHTSACTVAVMPEADELDAIEINPADLKIDTFRASGAGGQHVNKTDSAIRI 249 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTGVVV+CQ ERSQHKNKA+A ++L+A+L E K + E + +G G Sbjct: 250 THLPTGVVVECQDERSQHKNKAKAMSVLQARLTAAEQAK--AQSEQTEMRRNLVGTGDRS 307 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ ++++GD+D + + + Sbjct: 308 DRIRTYNF-PQGRMTDHRINLTLYKLDEIMEGDIDQIVGPLIQEHQ 352 >gi|299065550|emb|CBJ36721.1| peptide chain release factor RF-1 [Ralstonia solanacearum CMR15] Length = 356 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 115/344 (33%), Positives = 178/344 (51%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +R +N N+ + + L RE ++ ++ + D EL Sbjct: 5 LDQLAERTVEINALLAREDATANLDQYRKLTREHAEIEPVVAQYAAWKQAEDDVTTAQEL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + ++ + Q L D + +LE+ AG GG ES +A Sbjct: 65 LADPDMKAFAEDEIRAAREHMTTLEAELQRLLLPKDPNDHRNIFLEIRAGTGGDESALFA 124 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE+++++ E + + G K + + G AY LK E G HR+ R+ Sbjct: 125 GDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIVRLVGEGAYSRLKFESGGHRVQRVP 184 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D +I+I+ +D RIDT+RASGAGGQH+N TDSAVR+TH Sbjct: 185 ATEAQGRIHTSACTVAVMPEADPLADIQINPADLRIDTFRASGAGGQHINKTDSAVRLTH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQH+NK +A +L A+L + Q+RE A + K+ IG G + Sbjct: 245 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKD--RQEREAQAKEASARKSLIGSGDRSDR 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++DGDL + + A A + Sbjct: 303 IRTYNF-PQGRITDHRINLTLYKIDALMDGDLGELLGALAAEHQ 345 >gi|225175858|ref|ZP_03729851.1| peptide chain release factor 1 [Dethiobacter alkaliphilus AHT 1] gi|225168782|gb|EEG77583.1| peptide chain release factor 1 [Dethiobacter alkaliphilus AHT 1] Length = 356 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 120/351 (34%), Positives = 183/351 (52%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD +R L DP + E + L +E L ++ +E Q D Sbjct: 1 MFDKLKATEERFDELEKLISDPEVIARQDEWRKLTKEHSRLSEVVNAYREYQQVEQDLAE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127 E+ + D + + D + + E + D + +EV AG GG Sbjct: 61 AKEMLRDGGDEEMSRFLKDEITANTEKKEELTEKLRLLLLPRDPNDDKNVIVEVRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR+AE++ +KTE L+ ++ + G K I+G AY LK E GV Sbjct: 121 DEAALFAGDLFRMYTRYAERQGWKTEVLDANETDIGGFKEVVFAIEGDGAYSRLKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +E++I+++D RID + +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSAATVAVLP-EAEDVEVDINQNDLRIDVFCSSGPGGQSVNTTQ 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+P+G+VV CQ E+SQHKNK +A +LRA+L+ E + E A + KT++G Sbjct: 240 SAVRITHLPSGIVVSCQDEKSQHKNKDKAMRVLRARLF--EKAQEEAAAEQAAARKTQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + LDGDLD+ + A + ++ Sbjct: 298 SGDRSERIRTYNF-PQGRVSDHRIGMTLYKLDQFLDGDLDEMVDALITSEQ 347 >gi|312877228|ref|ZP_07737197.1| peptide chain release factor 1 [Caldicellulosiruptor lactoaceticus 6A] gi|311796037|gb|EFR12397.1| peptide chain release factor 1 [Caldicellulosiruptor lactoaceticus 6A] Length = 355 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 117/343 (34%), Positives = 176/343 (51%), Gaps = 11/343 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ L K DP + E + LM+E +L + +E + L EL Sbjct: 5 LQVIEEKYLELEKKIADPEIISQPQEWQKLMKEHSNLQPIVEKFREYKRILNTIKEAEEL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 + D + + L K + E + L D + +E+ AGAGG E+ Sbjct: 65 LDTDLDEDFEKLVKEELNHAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAGGEEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AE++ +K E + + + G K +I G AY LK E GVHR+ Sbjct: 125 LFAAELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + +E+EI E D IDT+RA GAGGQHVN T+SAVR Sbjct: 185 RVPVTESGGRIHTSTATVAVLP-EVEDVEVEIREEDLEIDTFRAGGAGGQHVNKTESAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 I H PTG+VV CQ ERSQH N+ +A +LRA+LY+ +++ ++++G G Sbjct: 244 IVHKPTGIVVTCQDERSQHANRDRAMKILRARLYDYYQSIQQKEIE--SQRRSQVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R + VLDG+LD+ + A + Sbjct: 302 SERIRTYNF-PQGRVTDHRIGLTLYKLEQVLDGELDEIIDALI 343 >gi|302762182|ref|XP_002964513.1| hypothetical protein SELMODRAFT_64370 [Selaginella moellendorffii] gi|300168242|gb|EFJ34846.1| hypothetical protein SELMODRAFT_64370 [Selaginella moellendorffii] Length = 366 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 136/355 (38%), Positives = 208/355 (58%), Gaps = 3/355 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++ ++ L D + L+ L + DP W+ +A+ ++ E + + ++ K Sbjct: 12 VAARVRQLLDSADLEQQEAVLADLENQASDPAFWEERSKAQKILSELNEIKDRVNLYKTF 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQ--RIKLEVEYKQFESLLSGEADSNDAYLE 120 + ++ D ++EL E + + I ++ + LLSG D A + Sbjct: 72 RAKVDDAQCIVELLEEMESPDAALKLEAAETVSWITAAMDRFELNKLLSGTYDKEGARIT 131 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + AGAGGT++QDWA MLLRMY RWA + FK+ +E GEEAGIKSATL I G AYG+ Sbjct: 132 ITAGAGGTDAQDWAEMLLRMYQRWATRSGFKSTVVESSPGEEAGIKSATLEIDGRYAYGY 191 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAG 239 + GE+G HRLVR SP++S R TSF+ + V P+ + IE+EI E D I T R+ G G Sbjct: 192 ISGEKGTHRLVRQSPFNSKGLRQTSFAGVEVMPLLEESEIEVEIPEGDLEITTCRSGGKG 251 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ+VN ++AVR+THIPTG+ ++C +ERSQ +NK +A +L++KL + ++R Sbjct: 252 GQNVNKVETAVRVTHIPTGIALRCSEERSQLQNKIKAIALLKSKLLVILEEQRAAEIKEI 311 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG+QIR+YV PY++VKDLRTN+E + S ++DG+L+ + A L K Sbjct: 312 RGDVVKAEWGQQIRNYVFHPYKLVKDLRTNVETSDISGIMDGNLEPLLTAYLMSK 366 >gi|187925494|ref|YP_001897136.1| peptide chain release factor 1 [Burkholderia phytofirmans PsJN] gi|238689472|sp|B2SZ27|RF1_BURPP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|187716688|gb|ACD17912.1| peptide chain release factor 1 [Burkholderia phytofirmans PsJN] Length = 360 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 118/344 (34%), Positives = 181/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D RL+ LN + N+ + + L RE L + + + D EL Sbjct: 9 LDQLTTRLAELNDLLSREDITSNLDQYRKLTREHAELGPVVDHYALWRQAMNDATTAQEL 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + ++ +R++ Q L D + +LE+ AG GG ES +A Sbjct: 69 LADASMRDFAEDEIRAARERMEKLGAELQKMLLPKDPNDDRNIFLEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE+ +++ E + + + G K + I G AY LK E G HR+ R+ Sbjct: 129 GDLLRMYLRFAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G + Sbjct: 249 LPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QSHEQQAKEAATRKSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++DGDLD+ + A ++ + Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELIAALVSEHQ 349 >gi|75675907|ref|YP_318328.1| peptide chain release factor 2 [Nitrobacter winogradskyi Nb-255] gi|74420777|gb|ABA04976.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrobacter winogradskyi Nb-255] Length = 322 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 199/309 (64%), Positives = 251/309 (81%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L+++++ I +++ L D + ++EL E+D +++ E+ + L+ +K EV+ ++ E Sbjct: 1 MQERTSLEDSLAGIGKVERELEDQIGMIELGEAENDEAVIDESENALKALKKEVDRRELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D YLEVHAGAGGTESQDWA MLLRMYTRWAEKR FK E LE GEEAGI Sbjct: 61 ALLSGEADRFDTYLEVHAGAGGTESQDWAAMLLRMYTRWAEKRGFKVEYLEETPGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ + G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PVVDDSI+I+I E Sbjct: 121 KSATVQVSGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVVDDSIKIDIKE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R DT R+ GAGGQHVN T+SAVR+TH+PTGV V CQ RSQHKN+AQAW+MLRA+LY Sbjct: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHVPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL++REE A +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ + S VLDG+LDD Sbjct: 241 EIELKRREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGNLDD 300 Query: 346 FMKATLAIK 354 FM ATLA + Sbjct: 301 FMAATLAQR 309 >gi|17547620|ref|NP_521022.1| peptide chain release factor 1 [Ralstonia solanacearum GMI1000] gi|20139328|sp|Q8XVD0|RF1_RALSO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|17429924|emb|CAD16608.1| probable peptide chain release factor 1 (rf-1) protein [Ralstonia solanacearum GMI1000] Length = 360 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 116/344 (33%), Positives = 178/344 (51%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +R +N N+ + + L RE L+ ++ + D EL Sbjct: 9 LDQLAERTVEINALLAREDATANLDQYRKLTREHAELEPVVAQYAAWKQAEDDVTTAQEL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + ++ + Q L D + +LE+ AG GG ES +A Sbjct: 69 LADPDMKAFAEDEIRAARERMTTLEAELQRLLLPKDPNDHRNIFLEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE+++++ E + + G K + + G AY LK E G HR+ R+ Sbjct: 129 GDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIVRLVGEGAYSRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D +I+I+ +D RIDT+RASGAGGQH+N TDSAVR+TH Sbjct: 189 ATEAQGRIHTSACTVAVMPEADPLADIQINPADLRIDTFRASGAGGQHINKTDSAVRLTH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQH+NK +A +L A+L + Q+RE A + K+ IG G + Sbjct: 249 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKD--RQEREAQAKEASARKSLIGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++DGDL + + A A + Sbjct: 307 IRTYNF-PQGRITDHRINLTLYKIDALMDGDLGELLGALAAEHQ 349 >gi|206890162|ref|YP_002248216.1| peptide chain release factor 1 [Thermodesulfovibrio yellowstonii DSM 11347] gi|238054474|sp|B5YIQ7|RF1_THEYD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|206742100|gb|ACI21157.1| peptide chain release factor 1 [Thermodesulfovibrio yellowstonii DSM 11347] Length = 353 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 113/344 (32%), Positives = 174/344 (50%), Gaps = 10/344 (2%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 + + DP ++ N E RE+ L+ ++ +E + L E+ Sbjct: 7 EVENKYEKITQTLSDPKVFSNKDEYMKYSREQAELEPIVTKFREYKRILKQIEEAEEMIK 66 Query: 78 EEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 D + Q K++ + + L D + LE+ AG GG E+ +A Sbjct: 67 SGDPDLKELAEEELQQLKKIKPQIEQELKVLLLPKDPRDEKNVILEIRAGTGGEEAALFA 126 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY ++AE + +K E ++ H G K I G A+ LK E GVHR+ RI Sbjct: 127 ANLFRMYAKYAESKGWKVEIIDSHPTGLGGFKEIIATISGKGAFSKLKYESGVHRVQRIP 186 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +++ R HTS +++ V P + ++I+I E D RIDT+ +SG GGQ VNT SAVRI H Sbjct: 187 VTEASGRIHTSTATVAVLP-EAEEVDIKIDEKDLRIDTFCSSGPGGQSVNTAYSAVRIVH 245 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG++VQCQ ERSQ KN+ +A +LRA+L E+E QK+E K ++G G + Sbjct: 246 IPTGIIVQCQDERSQIKNREKAMKVLRARLLEIERQKKEAER--AAERKGQVGTGERSER 303 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R + VL+G++D+ + A ++ + Sbjct: 304 IRTYNF-PQNRVTDHRIGLTLYKLEQVLNGNIDEIIDALISYYQ 346 >gi|182420270|ref|ZP_02951499.1| peptide chain release factor 1 [Clostridium butyricum 5521] gi|237666557|ref|ZP_04526542.1| peptide chain release factor 1 [Clostridium butyricum E4 str. BoNT E BL5262] gi|182375865|gb|EDT73457.1| peptide chain release factor 1 [Clostridium butyricum 5521] gi|237657756|gb|EEP55311.1| peptide chain release factor 1 [Clostridium butyricum E4 str. BoNT E BL5262] Length = 360 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 125/347 (36%), Positives = 189/347 (54%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L+ K DP + QN E + L +E L+ ++ KE + D E+ Sbjct: 6 LEFIENKYDELSVKISDPSIMQNQNEWRKLCKEHADLEIIVNAYKEYKKVTEDLEANKEM 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 EE+D + + S+ + + + L D + ++E+ GAGG E+ Sbjct: 66 LSEENDKEMREMLSEEISDLTKREVELENHIQILLLPKDPNDDKNVFVEIRGGAGGEEAA 125 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYTR+AE +++ E + +++ + G K +IKG AY LK E GVHR+ Sbjct: 126 LFAYNLFRMYTRYAETQRWAVEIMSLNETDLGGFKEVVFMIKGNGAYSKLKYESGVHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S+ R HTS S++ V P D +EIEISE D RID +RASG GGQ VNTTDSAVR Sbjct: 186 RVPDTESSGRIHTSTSTVAVLP-EVDDVEIEISEKDLRIDVFRASGNGGQCVNTTDSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+P+G+VV CQ E+SQ KNK +A +L+++LY E +RE I E K+++G G Sbjct: 245 ITHLPSGLVVSCQDEKSQLKNKEKAMKVLKSRLY--EQAERERAEGIAEDRKSQVGTGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + L+GD+D+ + A + + Sbjct: 303 SERIRTYNY-PQGRVTDHRIGLTLYKLETFLNGDIDEMINALITADQ 348 >gi|125558711|gb|EAZ04247.1| hypothetical protein OsI_26391 [Oryza sativa Indica Group] Length = 457 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 130/358 (36%), Positives = 213/358 (59%), Gaps = 4/358 (1%) Query: 1 MKLS-RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59 ++L+ ++ + D + ++ L K+ D LW + +A+ ++ + + + + Sbjct: 89 VELALARVGEVRQSAGLDQLEEEIASLEKKSADSSLWDDPSKAQEILVALTEVKDRVKLL 148 Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSGEADSNDA 117 +++ ++ + +++L E D + ++ + LLSG D A Sbjct: 149 NDLKSQVEEAETIVKLTEELDSIDTGLLEEASKIIKALNKALDNFEMTQLLSGPYDKEGA 208 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 + + AGAGGT++QDWA+MLLRMY RW EK+++KT +E GEEAGIKSAT+ ++G A Sbjct: 209 VINITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSATIELEGRYA 268 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRAS 236 YG+L GE+G HR+VR SP+++ R TSF+ + V P+ ++S+++EI E D I RA Sbjct: 269 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESMDVEIPEEDLEISFTRAG 328 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQ+VN ++AVR+ HIPTG+ V+C +ERSQ NK +A + L+AKL + ++R Sbjct: 329 GKGGQNVNKVETAVRMVHIPTGIAVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEI 388 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG+QIR+YV PY++VKD+RT E + + V+DG+LD F++A L K Sbjct: 389 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTACETSDITGVMDGELDTFIRAYLKYK 446 >gi|82703392|ref|YP_412958.1| peptide chain release factor 2 [Nitrosospira multiformis ATCC 25196] gi|82411457|gb|ABB75566.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrosospira multiformis ATCC 25196] Length = 310 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 160/308 (51%), Positives = 223/308 (72%), Gaps = 1/308 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 RE++ L++ + ++ I +L D L E+A EEDD + LQ + ++ ++ V +F Sbjct: 2 GREKKILESVVINLETISRQLQDARELFEMAEEEDDDATLQSVARDISHLEKAVSDMEFR 61 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 + S D+N+ ++++ +G+GGTE+QDWA ML RMY R+ E+R ++ E +E GE AGI Sbjct: 62 RMFSNPMDTNNCFVDIQSGSGGTEAQDWAAMLERMYLRYCERRGYQVEVMEESPGEVAGI 121 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSA+L I G AYG+L+ E GVHRLVR SP+DS +RRHTSF+S++VYP VD++IEI+I+ Sbjct: 122 KSASLKISGEYAYGYLRTETGVHRLVRKSPFDSGNRRHTSFASVFVYPEVDETIEIDINP 181 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D R+DT+RASGAGGQH+N TDSAVRITH PTG+VVQCQ RSQH+N+A A ML+++LY Sbjct: 182 ADLRVDTFRASGAGGQHINKTDSAVRITHNPTGIVVQCQSGRSQHRNRADAMAMLKSRLY 241 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KR E E +KT+IGWG QIRSYVL +KDLRT +E + +LDGDLDD Sbjct: 242 EAELRKRNEEKQAIEDTKTDIGWGHQIRSYVLD-QARIKDLRTGVESGNTQAILDGDLDD 300 Query: 346 FMKATLAI 353 F++A+L Sbjct: 301 FIEASLKQ 308 >gi|83747499|ref|ZP_00944537.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Ralstonia solanacearum UW551] gi|83725813|gb|EAP72953.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Ralstonia solanacearum UW551] Length = 374 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 119/344 (34%), Positives = 178/344 (51%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +R +N N+ + + L RE L+ ++ + D EL Sbjct: 23 LDQLAERTIEINALLAREDATANLDQYRKLTREHAELEPVVTQYAVWKQAENDVATAQEL 82 Query: 76 ALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + ++ R+ Q L D + +LE+ AG GG ES +A Sbjct: 83 LADPDMKAFAEDELRVARDRMTALEAELQRLLLPKDPNDHRNIFLEIRAGTGGDESALFA 142 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE+++++ E + + G K + G AY LK E G HR+ R+ Sbjct: 143 GDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLKFESGGHRVQRVP 202 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D +I+I+ +D RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 203 ATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDTFRASGAGGQHINKTDSAVRITH 262 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQH+NK +A +L A+L + Q+RE A + K+ IG G + Sbjct: 263 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKD--RQEREAQAKEASARKSLIGSGDRSDR 320 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ ++DGDLD+ + A + Sbjct: 321 IRTYNF-PQGRVTDHRINLTLYKIDALMDGDLDELLGTLAAEHQ 363 >gi|260772290|ref|ZP_05881206.1| peptide chain release factor 1 [Vibrio metschnikovii CIP 69.14] gi|260611429|gb|EEX36632.1| peptide chain release factor 1 [Vibrio metschnikovii CIP 69.14] Length = 362 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 117/339 (34%), Positives = 178/339 (52%), Gaps = 9/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72 ++ V+R + DP + + + + L +E L+ + Q D + Sbjct: 9 LESLVERYEEVQHLLGDPAVIGDQNKFRSLSKEYSQLEEVTKCFQAYQQAQEDFVAAEEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + E E I+ Q L D + +LE+ AGAGG E+ Sbjct: 69 TKEDDAEMREMAQDEMKAAKAEIERLSAELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AEK+ ++ E + + E G K + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRFAEKKGWRIEVMSASEAEHGGYKEMIAKVNGDGAYGVLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P + ++ EI SD +IDT+R+SGAGGQHVNTTDSA+RI Sbjct: 189 VPATESQGRVHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR I ++ + +G G Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLGARIVQAEEKKRAAE--ISDTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +IR+Y P V D R N+ ++V++GDL + Sbjct: 307 DRIRTYNY-PQSRVSDHRINLTIYRLNEVMEGDLQALID 344 >gi|89257152|ref|YP_514514.1| peptide chain release factor 2 [Francisella tularensis subsp. holarctica LVS] gi|115315491|ref|YP_764214.1| peptide chain release factor 2 [Francisella tularensis subsp. holarctica OSU18] gi|156503377|ref|YP_001429442.1| peptide chain release factor 2 [Francisella tularensis subsp. holarctica FTNF002-00] gi|254368376|ref|ZP_04984394.1| peptide chain release factor 2 [Francisella tularensis subsp. holarctica 257] gi|254368387|ref|ZP_04984404.1| peptide chain release factor 2 [Francisella tularensis subsp. holarctica FSC022] gi|89144983|emb|CAJ80343.1| peptide chain release factor 2 [Francisella tularensis subsp. holarctica LVS] gi|115130390|gb|ABI83577.1| peptide chain release factor B [Francisella tularensis subsp. holarctica OSU18] gi|134254184|gb|EBA53278.1| peptide chain release factor 2 [Francisella tularensis subsp. holarctica 257] gi|156253980|gb|ABU62486.1| peptide chain release factor 2 [Francisella tularensis subsp. holarctica FTNF002-00] gi|157121281|gb|EDO65482.1| peptide chain release factor 2 [Francisella tularensis subsp. holarctica FSC022] Length = 325 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 165/324 (50%), Positives = 220/324 (67%), Gaps = 3/324 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 + ED +W N A+ L +++ L+N + + I + L LLEL E++ Sbjct: 2 ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELGEEDESLMQEIAK 61 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++ E +F + SG+ D+N A+L++ +G+GGTE+QDWA ML+RMY RWA+ Sbjct: 62 DTQNVASEI--EKLEFRRMFSGKMDANKAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK ++ DG+ AGIK TL I+G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QHKN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL +KDLRT Sbjct: 240 QHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIKDLRT 298 Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352 +E T+ VLDGDLD F++A+L Sbjct: 299 GVENTNTQAVLDGDLDKFIEASLK 322 >gi|39935519|ref|NP_947795.1| peptide chain release factor 2 [Rhodopseudomonas palustris CGA009] gi|39649371|emb|CAE27894.1| translation peptide releasing factor RF-2 [Rhodopseudomonas palustris CGA009] Length = 322 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 201/309 (65%), Positives = 251/309 (81%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ER L+++++ I +++ L DN+ ++EL E D I++E D L+ +K EV ++ E Sbjct: 1 MQERTSLEDSLTGIGKVERELTDNIEMIELGEAEGDEGIVKEAEDALKALKKEVARRELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD D YLEVHAGAGGTESQDWA+MLLRMY RWAEK FK E LE +GEEAGI Sbjct: 61 ALLSGEADRFDTYLEVHAGAGGTESQDWASMLLRMYVRWAEKHGFKIEYLEESEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PV+D+SI+I+I+E Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDNSIKIDIAE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ RSQHKN+AQAW+MLRA+LY Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KREE A +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ + + VLDGDLD+ Sbjct: 241 EIELKKREEQAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300 Query: 346 FMKATLAIK 354 FM ATLA + Sbjct: 301 FMAATLAQR 309 >gi|114326944|ref|YP_744101.1| peptide chain release factor 2 [Granulibacter bethesdensis CGDNIH1] gi|114315118|gb|ABI61178.1| bacterial peptide chain release factor 2 (RF-2) [Granulibacter bethesdensis CGDNIH1] Length = 323 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 187/302 (61%), Positives = 237/302 (78%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRER L + + + ++ + D L E+A + D ++ + L+ I E + + E Sbjct: 2 MRERTRLASQVEGVLRMESEVSDATELAEMAEADGDEAMATDARRMLETIAAEAKRLEIE 61 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD NDAYLE+++GAGGTE+QDWA MLLRMYTRWAE +K +E DGE+AGI Sbjct: 62 SLLSGEADGNDAYLEINSGAGGTEAQDWAEMLLRMYTRWAEAHGYKVTLIEQSDGEQAGI 121 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATL + GP+AYGWLK E GVHRLVRISP+DS +RR TSF+SIWVYPVVDD+IEIEI+E Sbjct: 122 KSATLQVAGPSAYGWLKTEAGVHRLVRISPFDSAARRQTSFASIWVYPVVDDNIEIEINE 181 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D ++DT+RASGAGGQHVN T+SA+RITH+P+G++V CQ +RSQH+N+A A NML+A+LY Sbjct: 182 ADLKVDTFRASGAGGQHVNKTESAIRITHVPSGIIVACQTDRSQHRNRATAMNMLKARLY 241 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E ELQKRE A E++K+EIGWG QIRSYVL PYQ+VKDLRTN+EK +P VLDGDLD+ Sbjct: 242 EAELQKREAAAQEQENAKSEIGWGHQIRSYVLAPYQLVKDLRTNVEKGNPGAVLDGDLDE 301 Query: 346 FM 347 FM Sbjct: 302 FM 303 >gi|70732476|ref|YP_262238.1| peptide chain release factor 1 [Pseudomonas fluorescens Pf-5] gi|119361580|sp|Q4K695|RF1_PSEF5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|68346775|gb|AAY94381.1| peptide chain release factor 1 [Pseudomonas fluorescens Pf-5] Length = 360 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 116/346 (33%), Positives = 176/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + + +E ++ ++ K++ D L Sbjct: 9 LDILQDRFEELTALLGDAEVISDQAKFRAYSKEYAEVEPIVATYKQVLKVQADLEGAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + + Q L D + +LE+ AG GG E+ Sbjct: 69 LKDNDPDLREMAAEEVREAKEQLAELESSLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AE+R ++ E L ++GE G K ++G + YG LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAERRGWRLEILSENEGEHGGYKEVIARVEGESVYGKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI+ +D RIDTYR+SGAGGQHVN TDSA+RI Sbjct: 189 VPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRIDTYRSSGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIP+G+VV+CQ+ERSQHKN+A+A + L AKL + Q I K +G G Sbjct: 249 THIPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAANAIASERKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ S ++L G ++ ++ LA + Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYSLDEILAGGVEAVIEPLLAEYQ 351 >gi|331002270|ref|ZP_08325789.1| peptide chain release factor 1 [Lachnospiraceae oral taxon 107 str. F0167] gi|330411364|gb|EGG90780.1| peptide chain release factor 1 [Lachnospiraceae oral taxon 107 str. F0167] Length = 355 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 112/350 (32%), Positives = 186/350 (53%), Gaps = 11/350 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68 +FD ++ V + + + + + LM+E+ L + E + D Sbjct: 1 MFDNLEDIVIHYDEIMAELAGGDVANDQNRFRKLMKEQSDLAPLVETYGEYKKAKQLQED 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 L +LE+ +E +E ++ + + E + L D + LE+ AGAGG Sbjct: 61 ALEMLEMNDDEMKEMAKEELAEGKRLEEELSEKLKILLLPKDPNDEKNIMLEIRAGAGGD 120 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMY +AE + +K E +++++ G K ++ G AY LK E GVH Sbjct: 121 EAALFAMQLYRMYVHYAETQNWKVEMIDVNENGIGGYKEVVAMVSGKGAYSKLKYESGVH 180 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS +S+ V P + ++++I +D RID RASG GGQ VNTTDS Sbjct: 181 RVQRVPETESGGRIHTSTASVAVMP-EAEEVDVQIDMNDVRIDVMRASGNGGQCVNTTDS 239 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+TH PTG+V+ Q E+SQ +NK +A+ +LR+KLYE+EL+K++ + +++IG Sbjct: 240 AVRLTHYPTGIVIYSQTEKSQLQNKEKAFALLRSKLYEIELEKKQ--SAEAADRRSQIGT 297 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R N+ +++GD+ + + +A + Sbjct: 298 GDRSEKIRTYNF-PQGRVTDHRINLTLYKLDKIMNGDIQELIDGCIAADQ 346 >gi|291524540|emb|CBK90127.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium rectale DSM 17629] Length = 358 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 115/351 (32%), Positives = 182/351 (51%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ + L +P + + K LM+E+ L + K+ ++ + Sbjct: 1 MFDKLEDLIHHYEELMNLLSEPDVANDANRFKKLMKEQSDLAPIVETYKKYKECKQNIED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L + EE D + + + L+ K + + + L D + +E+ AGAGG Sbjct: 61 SLAILNEESDEEMRELAKEELKDSKEQVEELEKELKILLLPKDPNDDKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY +AE R +K E L+ + G+KS ++KG AY LK E GV Sbjct: 121 EEAALFAAEIYRMYVHYAENRGWKVETLDADETGIGGMKSVEFMVKGSGAYSILKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R TS S+ V P +D + ID RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESQGRIQTSTCSVAVMPEAEDVDVKIDDKDIR-IDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+V+ Q E+SQ +NK +A+ +LR KLY++ELQK+++ E +++IG Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQIQNKEKAFALLRTKLYDMELQKKQD--AEAEERRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R N+ +L+GD+ + + A +A + Sbjct: 298 TGDRAEKIRTYNF-PQGRVTDHRINLTLYKLDKILNGDIQEIIDACIAADQ 347 >gi|326423672|ref|NP_759262.2| peptide chain release factor 1 [Vibrio vulnificus CMCP6] gi|32171537|sp|Q8DFF9|RF1_VIBVU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|46576703|sp|Q7MMY6|RF1_VIBVY RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|319999027|gb|AAO08789.2| peptide chain release factor 1 [Vibrio vulnificus CMCP6] Length = 362 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 117/346 (33%), Positives = 181/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R + DP + + + + L +E L+ + D + E+ Sbjct: 9 LEMLVERYEEVQHLLGDPGVIGDQDKFRALSKEYSQLEEVTKCFTAYKQAQEDLVAAEEM 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 A E+D + I+ Q L D + +LE+ AGAGG E+ Sbjct: 69 AKEDDAEMREMAQEEIKAAKVAIEDLAAELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AEKR ++ E + ++ E G K + G AYG+LK E G HR+ R Sbjct: 129 FAGDLFRMYSKFAEKRGWRIEVMSANEAEHGGYKEMIAKVNGDGAYGFLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ + P + ++ EI SD +IDT+R+SGAGGQHVNTTDSA+RI Sbjct: 189 VPATESQGRVHTSACTVAIMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG VV+CQ ERSQHKNKA+A +L A++ + E KR + ++ + +G G Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEAKRAAE--VSDTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ S+V++GDL + + + Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTIYRLSEVMEGDLQSLIDPVIQEHQ 351 >gi|322421625|ref|YP_004200848.1| peptide chain release factor 1 [Geobacter sp. M18] gi|320128012|gb|ADW15572.1| peptide chain release factor 1 [Geobacter sp. M18] Length = 359 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 114/351 (32%), Positives = 181/351 (51%), Gaps = 11/351 (3%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN- 69 +FD + R L + DP + N E + L +E L I+ +E + L D Sbjct: 2 SMFDRIADLETRFEELESLLSDPEVLANQGEFRKLSKEHSGLAELIAAYREYKKVLADIG 61 Query: 70 --LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 LL+ +E E +R + + L D + LE+ AG GG Sbjct: 62 DNRELLKEPDQEMREMAQAELESLEERREQLESEIKVLLLPKDPNDDKNVVLEIRAGTGG 121 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 ES +A L RMY+R+AE +++ E + + E+ G K L++G + LK E G Sbjct: 122 DESALFAGDLFRMYSRFAEVNRWRVEVISASESEKGGFKEVIALVEGAGVFAKLKYESGT 181 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS ++ V P + ++I+I+ +D +ID YR+SGAGGQHVNTTD Sbjct: 182 HRVQRVPETEAQGRIHTSACTVAVMP-EAEDVDIDINPADLKIDVYRSSGAGGQHVNTTD 240 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTG VV CQ+ERSQ KN+A+A +L++++ + L ++ A + K+++G Sbjct: 241 SAVRITHIPTGTVVACQEERSQIKNRAKAMKVLKSRILDNILMEQN--AKLAADRKSQVG 298 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P + D R + ++ GD+ + + A + Sbjct: 299 SGDRSERIRTYNF-PQGRMTDHRIGLTLYRLDAIMAGDIGEIADSLRAHYQ 348 >gi|229588283|ref|YP_002870402.1| peptide chain release factor 1 [Pseudomonas fluorescens SBW25] gi|259585227|sp|C3KDC6|RF1_PSEFS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|229360149|emb|CAY47006.1| peptide chain release factor 1 [Pseudomonas fluorescens SBW25] Length = 360 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 116/346 (33%), Positives = 175/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + + +E ++ ++ K + D L Sbjct: 9 LDVLQDRFEELTALLGDGEVISDQAKFRAYSKEYAEVEPIVATYKHLTKVQADLEGAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + + E Q L D + +LE+ AG GG E+ Sbjct: 69 LKDSDPDMREMAVEEVREAKEKLAELEGDLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AE+R ++ E L ++GE G K ++G N YG LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI+ +D R+DTYR+SGAGGQHVN TDSA+RI Sbjct: 189 VPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + Q I K +G G Sbjct: 249 THLPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAANAIASERKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y V D R N+ S ++L G +D ++ LA + Sbjct: 307 ERIRTYNFA-QGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLAEYQ 351 >gi|239933740|ref|ZP_04690693.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672] Length = 359 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 139/350 (39%), Positives = 204/350 (58%), Gaps = 6/350 (1%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + + + D D ++ L + P LW N EA+ + HL + + ++ R+ Sbjct: 1 MESIEAVLDLDRMRADIAVLEEQAAAPSLWDNPDEAQKITSRLSHLQAEVRKAEALRGRI 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D +L E+A EEDD E L ++ ++ + +LLSGE D+ +A + + A AG Sbjct: 61 DDLAVLFEMAEEEDDPDTRAEAEAELADVRKALDEMEVRTLLSGEYDAREALVNIRAEAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G ++ D+A L RMY RWAE+ +KTE E EEAGIKS T ++ P AYG L EQG Sbjct: 121 GVDAADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLSVEQG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HRLVRISP+D+ RR TSF+ + V PVV+ S ++I ESD R+D YR+SG + + Sbjct: 181 THRLVRISPFDNQGRRQTSFAGVEVLPVVEQSDHVDIDESDLRVDVYRSSGPSC-NPRDS 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 D VRITH+PTG++ ERS+ +NK A N+L+A+L ++R+E ++ K E Sbjct: 240 DFMVRITHLPTGIMASSDSERSRTRNKVTAMNVLKARLLG---RRRQEEQAKMDALKDEG 296 Query: 307 G--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 G G Q+RSY L PYQMVKDLRT E +P V +G++D F++A + + Sbjct: 297 GNPCGNQVRSYELHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWR 346 >gi|157412537|ref|YP_001483403.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT 9215] gi|157387112|gb|ABV49817.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT 9215] Length = 354 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 139/344 (40%), Positives = 204/344 (59%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 L +FD + L + P W+N EAK M + + + + + + D Sbjct: 2 LRIVFDVPRLKAKRRELEQISAQPAFWENQEEAKKQMLILDDVKAQLELLDKWKTFISDA 61 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LEL E + ++ E+ L++++ ++ +FE LL GE D A + ++AGAGGT+ Sbjct: 62 NASLELYSLEPEEEMILESKQGLKKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGGTD 121 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDW +LLRMY+RWA+ + E+ GEEAGIKS T I G AYG+L+ E+G HR Sbjct: 122 AQDWVEILLRMYSRWADNNQMSLVINELSQGEEAGIKSVTFEIDGKYAYGYLQHEKGTHR 181 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+++N +R TSF+ + V P +DD+I ++I E D I T R+ GAGGQ+VN ++A Sbjct: 182 LVRISPFNANGKRQTSFAGVEVMPKLDDNISLDIPEKDLEITTSRSGGAGGQNVNKVETA 241 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRI H+P+G+ V+C QERSQ +NK +A +L++KL + ++R + E WG Sbjct: 242 VRIVHLPSGISVRCTQERSQLQNKEKAMLLLKSKLLVIAKEQRAAEVADIKGDIVEAAWG 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIR+YV PYQMVKDLRT E VLDG L+ F+ L + Sbjct: 302 NQIRNYVFHPYQMVKDLRTMQETNDLDSVLDGGLEPFIHELLRM 345 >gi|226531101|ref|NP_001152654.1| peptide chain release factor 2 [Zea mays] gi|195658609|gb|ACG48772.1| peptide chain release factor 2 [Zea mays] gi|223950205|gb|ACN29186.1| unknown [Zea mays] Length = 449 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 130/358 (36%), Positives = 212/358 (59%), Gaps = 4/358 (1%) Query: 1 MKLS-RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59 ++L+ ++N + + ++ L K+ D LW + +A+ ++ + + + + Sbjct: 85 VELALERVNEVRQSAGLQQLEEDIASLENKSSDSSLWDDPSKAQGILVSLTEVKDKVKLL 144 Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSGEADSNDA 117 + + ++ + +++L E D + ++ + LLSG D A Sbjct: 145 NDFKLQIEEAETIVKLTEELDSIDTGLLEEASKIIKALNKALDNFEMTQLLSGPYDKEGA 204 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 + + AGAGGT++QDWA+MLLRMY RW EK+++KT +E GEEAGIKSAT+ ++G A Sbjct: 205 VINISAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSATVELEGRYA 264 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRAS 236 YG+L GE+G HR+VR SP+++ R TSF+ + V P+ ++S+ ++I E D I RA Sbjct: 265 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESMAVDIPEEDLEISFTRAG 324 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQ+VN ++AVR+ HIPTG+ V+C +ERSQ NK +A + L+AKL + L++R Sbjct: 325 GKGGQNVNKVETAVRMVHIPTGIAVRCSEERSQLANKIKALSRLKAKLLVIALEQRASEI 384 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG+QIR+YV PY++VKD+RT E + + V+DG+LD F++A L K Sbjct: 385 KQIRGDIVKAEWGQQIRNYVFHPYKLVKDVRTGCETSDITGVMDGELDPFIRAYLKYK 442 >gi|261343909|ref|ZP_05971554.1| peptide chain release factor 1 [Providencia rustigianii DSM 4541] gi|282568295|gb|EFB73830.1| peptide chain release factor 1 [Providencia rustigianii DSM 4541] Length = 360 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 118/340 (34%), Positives = 179/340 (52%), Gaps = 7/340 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L +E L + + Q D L Sbjct: 9 LEALQERYEEIQAHLADAGVIADQDRFRALSKEYAQLTDVANCFTAWQAVQEDIETAQML 68 Query: 76 ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E D +R + + Q L D + ++E+ AGAGG E+ +A Sbjct: 69 LDDPEMKEMAQEELKDAKERNEELEQQLQLLLLPKDPDDEYNCFVEIRAGAGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE +++ E + DGE G K I G + YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESNRWRVELMSTSDGEHGGYKEVIAKISGDSVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +I V P + ++ EIS +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTIAVLPELPEAELPEISPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ + E+ KR E + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKAMSVLGARIRQAEMAKRHE--AEASERRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IR+Y P V D R N+ +V++G LD ++ + Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDTLIQPII 345 >gi|146296536|ref|YP_001180307.1| peptide chain release factor 1 [Caldicellulosiruptor saccharolyticus DSM 8903] gi|166223538|sp|A4XJN1|RF1_CALS8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|145410112|gb|ABP67116.1| bacterial peptide chain release factor 1 (bRF-1) [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 355 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 118/343 (34%), Positives = 178/343 (51%), Gaps = 11/343 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ L K DP + N E + LM+E +L + +E + + EL Sbjct: 5 LQVIEEKYLELEKKISDPEIINNNQEWQKLMKEHSNLQPIVEKFREYKRIIKTIEEAEEL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 D + + L + K + E + L D + +E+ AGAGG E+ Sbjct: 65 LDTNLDEDFEKLVKEELNQAKEQKEIVERELKILLLPKDPNDEKNVIMEIRAGAGGEEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AE++ +K E + + + G K +I G AY LK E GVHR+ Sbjct: 125 LFAAELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + +E+EI E D I+T+RA GAGGQHVN T+SAVR Sbjct: 185 RVPVTESGGRIHTSTATVAVLP-EVEDVEVEIREEDLEIETFRAGGAGGQHVNKTESAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH PTG+VV CQ ERSQH N+ +A +LRA+LY+ +++ ++++G G Sbjct: 244 ITHKPTGIVVSCQDERSQHANRDRAMKILRARLYDYYQSLQQKEIE--SQRRSQVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R + VLDGDLD+ + A + Sbjct: 302 SERIRTYNF-PQGRVTDHRIGLTLYKLEQVLDGDLDEIIDALI 343 >gi|224419024|ref|ZP_03657030.1| peptide chain release factor 2 [Helicobacter canadensis MIT 98-5491] gi|253827969|ref|ZP_04870854.1| peptide chain release factor 2 [Helicobacter canadensis MIT 98-5491] gi|313142536|ref|ZP_07804729.1| peptide chain release factor 2 [Helicobacter canadensis MIT 98-5491] gi|253511375|gb|EES90034.1| peptide chain release factor 2 [Helicobacter canadensis MIT 98-5491] gi|313131567|gb|EFR49184.1| peptide chain release factor 2 [Helicobacter canadensis MIT 98-5491] Length = 363 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 171/350 (48%), Positives = 231/350 (66%), Gaps = 4/350 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + + R+ + + + W++ +A +E++ + KE Sbjct: 12 ELEIKRQNIEKIMQPSQLQSRIEEIESLEQQKEFWEDSKKAGEYQKEKKRCLRQLEKYKE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 L D L EL+ ++++ ++ +++ + E +LSGE DSN+A + Sbjct: 72 ASLALSDAKELFELSSDDEETLNELFN--EAPMLEEQIKKAEIEVMLSGELDSNNAIFTI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 GAGGTESQDWA+ML RMY RWAE+ FK E L+ +G+EAGIK A+ +IKG NAYG+ Sbjct: 130 TPGAGGTESQDWASMLYRMYLRWAERCGFKVELLDYQEGDEAGIKDASFIIKGENAYGYT 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HRLVRISP+DSN++RHTSF+S+ V P +DD+I IEI E D RIDTYRASGAGGQ Sbjct: 190 KVENGIHRLVRISPFDSNAKRHTSFASVQVTPEIDDNISIEIEEKDLRIDTYRASGAGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+N T+SA+RITHIPTG+VVQCQ +RSQHKNKA A ML++KLYELE QKR E I Sbjct: 250 HINKTESAIRITHIPTGIVVQCQNDRSQHKNKATALKMLKSKLYELEQQKRNE--QIAND 307 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K+EIGWG QIRSYVL PYQ VKDLR+NI ++ +LDGD+D ++ L Sbjct: 308 DKSEIGWGHQIRSYVLAPYQQVKDLRSNIAYSNVEAILDGDIDSILEGVL 357 >gi|238923860|ref|YP_002937376.1| peptide chain release factor 1 [Eubacterium rectale ATCC 33656] gi|259585240|sp|C4Z911|RF1_EUBR3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238875535|gb|ACR75242.1| peptide chain release factor 1 [Eubacterium rectale ATCC 33656] Length = 358 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 115/351 (32%), Positives = 182/351 (51%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ + L +P + + K LM+E+ L + K+ ++ + Sbjct: 1 MFDKLEDLIHHYEELMNLLSEPDVANDANRFKKLMKEQSDLAPIVETYKKYKECKQNIED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L + EE D + + + L+ K + + + L D + +E+ AGAGG Sbjct: 61 SLAILDEESDEEMRELAKEELKDSKEQVEELEKKLKILLLPKDPNDDKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY +AE R +K E L+ + G+KS ++KG AY LK E GV Sbjct: 121 EEAALFAAEIYRMYVHYAENRGWKVETLDADETGIGGMKSVEFMVKGSGAYSILKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R TS S+ V P +D + ID RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESQGRIQTSTCSVAVMPEAEDVDVKIDDKDIR-IDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+V+ Q E+SQ +NK +A+ +LR KLY++ELQK+++ E +++IG Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQIQNKEKAFALLRTKLYDMELQKKQD--AEAEERRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R N+ +L+GD+ + + A +A + Sbjct: 298 TGDRAEKIRTYNF-PQGRVTDHRINLTLYKLDKILNGDIQEIIDACIAADQ 347 >gi|328675334|gb|AEB28009.1| Peptide chain release factor 2 [Francisella cf. novicida 3523] Length = 325 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 166/324 (51%), Positives = 221/324 (68%), Gaps = 3/324 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 + ED +W N A+ L +++ L+N + + I + L LLELA E++ Sbjct: 2 ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEHISETLETLSELLELAEEDETLMQEIAK 61 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++ E +F + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ Sbjct: 62 DTQDVASEI--EKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK + DG+ AGIK TL I+G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S Sbjct: 120 GFKVSVDNVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QHKN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL +KDLRT Sbjct: 240 QHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIKDLRT 298 Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352 +E T+ VLDGDLD F++A+L Sbjct: 299 GVENTNTQAVLDGDLDKFIEASLK 322 >gi|37679115|ref|NP_933724.1| peptide chain release factor 1 [Vibrio vulnificus YJ016] gi|320157139|ref|YP_004189518.1| peptide chain release factor 1 [Vibrio vulnificus MO6-24/O] gi|37197857|dbj|BAC93695.1| protein chain release factor A [Vibrio vulnificus YJ016] gi|319932451|gb|ADV87315.1| peptide chain release factor 1 [Vibrio vulnificus MO6-24/O] Length = 363 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 117/346 (33%), Positives = 181/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R + DP + + + + L +E L+ + D + E+ Sbjct: 10 LEMLVERYEEVQHLLGDPGVIGDQDKFRALSKEYSQLEEVTKCFTAYKQAQEDLVAAEEM 69 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 A E+D + I+ Q L D + +LE+ AGAGG E+ Sbjct: 70 AKEDDAEMREMAQEEIKAAKVAIEDLAAELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 129 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AEKR ++ E + ++ E G K + G AYG+LK E G HR+ R Sbjct: 130 FAGDLFRMYSKFAEKRGWRIEVMSANEAEHGGYKEMIAKVNGDGAYGFLKFESGGHRVQR 189 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ + P + ++ EI SD +IDT+R+SGAGGQHVNTTDSA+RI Sbjct: 190 VPATESQGRVHTSACTVAIMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRI 249 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG VV+CQ ERSQHKNKA+A +L A++ + E KR + ++ + +G G Sbjct: 250 THLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEAKRAAE--VSDTRRNLLGSGDRS 307 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ S+V++GDL + + + Sbjct: 308 DRIRTYNY-PQGRVSDHRINLTIYRLSEVMEGDLQSLIDPVIQEHQ 352 >gi|328676241|gb|AEB27111.1| Peptide chain release factor 2 [Francisella cf. novicida Fx1] Length = 325 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 166/324 (51%), Positives = 221/324 (68%), Gaps = 3/324 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 + ED +W N A+ L +++ L+N + + I + L LLELA E++ Sbjct: 2 ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELAEEDESLMQEIAK 61 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++ E +F + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ Sbjct: 62 DTQNVASEI--EKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADGH 119 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK + DG+ AGIK TL I+G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S Sbjct: 120 GFKVSVDNVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QHKN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL +KDLRT Sbjct: 240 QHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIKDLRT 298 Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352 +E T+ VLDGDLD F++A+L Sbjct: 299 GVENTNTQAVLDGDLDKFIEASLK 322 >gi|293602161|ref|ZP_06684612.1| peptide chain release factor RF1 [Achromobacter piechaudii ATCC 43553] gi|292819431|gb|EFF78461.1| peptide chain release factor RF1 [Achromobacter piechaudii ATCC 43553] Length = 356 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 117/344 (34%), Positives = 178/344 (51%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ RL+ ++ P ++ + L RER L+ + D E+ Sbjct: 5 LEHLCNRLTEVDALLAQPETASDMDRFRKLSRERAELEPVVEAFTAFARTEEDLATAQEM 64 Query: 76 ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D ++ ++ + + Q L D +LE+ AG GG ES ++ Sbjct: 65 LSDPDMKAMAEDEIKTGRVKLESLESALQLLLLPRDPNDGRSVFLEIRAGTGGDESALFS 124 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE R ++ E + E G K I G AYG LK E G HR+ R+ Sbjct: 125 GDLLRMYTRYAETRGWRVELMSESASELGGYKEVIARIDGDGAYGRLKFESGAHRVQRVP 184 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V D+ EI I+ +D RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 185 ATEAQGRIHTSACTVAVMAEADEMSEIVINANDLRIDTFRASGAGGQHINKTDSAVRITH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQH+NK +A +L A+L + E ++R+ + K+ IG G + Sbjct: 245 LPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKETRERQ--SKEAAERKSLIGTGDRSER 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +++GDL++ A +A + Sbjct: 303 IRTYNF-PQGRVTDHRINLTLYKLQQIMEGDLEELTGALIAEHQ 345 >gi|254526132|ref|ZP_05138184.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT 9202] gi|221537556|gb|EEE40009.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT 9202] Length = 354 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 139/344 (40%), Positives = 204/344 (59%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 L +FD + L + P W+N EAK M + + + + + + D Sbjct: 2 LRIVFDVPRLKAKRRELEQISAQPAFWENQEEAKKQMLILDDVKAQLELLDKWKTFISDA 61 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LEL E + ++ E+ L++++ ++ +FE LL GE D A + ++AGAGGT+ Sbjct: 62 NASLELYSLEPEEEMILESKQGLKKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGGTD 121 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDW +LLRMY+RWA+ + E+ GEEAGIKS T I G AYG+L+ E+G HR Sbjct: 122 AQDWVEILLRMYSRWADNNQMTLVINELSQGEEAGIKSVTFEIDGKYAYGYLQHEKGTHR 181 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+++N +R TSF+ + V P +DD+I ++I E D I T R+ GAGGQ+VN ++A Sbjct: 182 LVRISPFNANGKRQTSFAGVEVMPKLDDNISLDIPEKDLEITTSRSGGAGGQNVNKVETA 241 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRI H+P+G+ V+C QERSQ +NK +A +L++KL + ++R + E WG Sbjct: 242 VRIVHLPSGISVRCTQERSQLQNKEKAMLLLKSKLLVIAKEQRAAEVADIKGDIVEAAWG 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIR+YV PYQMVKDLRT E VLDG L+ F+ L + Sbjct: 302 NQIRNYVFHPYQMVKDLRTMQETNDLDSVLDGGLEPFIHELLRM 345 >gi|208780604|ref|ZP_03247943.1| peptide chain release factor 2 [Francisella novicida FTG] gi|254373627|ref|ZP_04989111.1| peptide chain release factor 2 [Francisella novicida GA99-3548] gi|151571349|gb|EDN37003.1| peptide chain release factor 2 [Francisella novicida GA99-3548] gi|208743579|gb|EDZ89884.1| peptide chain release factor 2 [Francisella novicida FTG] Length = 325 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 166/324 (51%), Positives = 220/324 (67%), Gaps = 3/324 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 + ED +W N A+ L +++ L+N + + I + L LLEL E++ Sbjct: 2 ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELGEEDESLMQEIAK 61 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++ E +F + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ Sbjct: 62 DTQNVASEI--EKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADGH 119 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK I DG+ AGIK TL I+G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S Sbjct: 120 GFKVSVDNISDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QHKN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL +KDLRT Sbjct: 240 QHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIKDLRT 298 Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352 +E T+ VLDGDLD F++A+L Sbjct: 299 GVENTNTQAVLDGDLDKFIEASLK 322 >gi|254372144|ref|ZP_04987636.1| peptide chain release factor 2 [Francisella tularensis subsp. novicida GA99-3549] gi|151569874|gb|EDN35528.1| peptide chain release factor 2 [Francisella novicida GA99-3549] Length = 325 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 166/324 (51%), Positives = 220/324 (67%), Gaps = 3/324 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 + ED +W N A+ L +++ L+N + + I + L LLEL E++ Sbjct: 2 ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLNELLELGEEDESLMQEIAK 61 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++ E +F + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ Sbjct: 62 DTQNVASEI--EKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADGH 119 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK I DG+ AGIK TL I+G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S Sbjct: 120 GFKVSVDNISDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QHKN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL +KDLRT Sbjct: 240 QHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIKDLRT 298 Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352 +E T+ VLDGDLD F++A+L Sbjct: 299 GVENTNTQAVLDGDLDKFIEASLK 322 >gi|146296348|ref|YP_001180119.1| peptide chain release factor 2 [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409924|gb|ABP66928.1| bacterial peptide chain release factor 2 (bRF-2) [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 323 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 160/313 (51%), Positives = 218/313 (69%) Query: 40 IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV 99 ++ ++++ + L + I +++ + D +L +L +EE + + E +L ++ ++ Sbjct: 2 ENSQKVLQQIKRLKDKIERYQKLYSQWEDLKVLTQLCIEESNIEMSDELEKDLIDLERKI 61 Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159 E + E LL+G D N+A L +HAGAGGTE+QDWA MLLRMYTRWA K+ +K E L+I Sbjct: 62 EEFKLEILLNGPYDKNNAILSIHAGAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILP 121 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 GEEAGIK+ T+ I G NAYG+LK E+GVHRLVRISP+D+ RRHTSF+++ V P V+D Sbjct: 122 GEEAGIKNVTVRIVGENAYGYLKAEKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDT 181 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 +IEI E D IDT+RASGAGGQHVN T+SAVRI HIPTG+VV CQ ERSQHKN+ A + Sbjct: 182 DIEIKEEDLEIDTFRASGAGGQHVNKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKI 241 Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 L+AKL EL ++R E + +TEIGWG QIRSYV PY +VKD RT+ E + V+ Sbjct: 242 LKAKLLELREKERREKIQKLKGEQTEIGWGNQIRSYVFCPYTLVKDHRTDAEVGNVEAVM 301 Query: 340 DGDLDDFMKATLA 352 DG++D F+ A L Sbjct: 302 DGEIDVFINAYLK 314 >gi|46406291|emb|CAG25777.1| putative translation releasing factor 2 [Cucumis sativus] Length = 453 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 136/354 (38%), Positives = 206/354 (58%), Gaps = 3/354 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 S ++ + Q L+ L +K D W + +A+ ++ + + I + + + Sbjct: 91 SERVEEIRNSAGLLQLDQELADLESKAADNSFWDDRSKAQKVLMAMTDVKDKIKMLTDFK 150 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSGEADSNDAYLEV 121 ++ + +++L E D + ++ + LLSG D A + + Sbjct: 151 TQVEEAETIVKLTEEMDSVDVGLLEEATKIIKDLNKALDQFELSELLSGPYDKEGAVISI 210 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGGT++QDWA+MLLRMY RW EK+++KT +E GEEAGIKSAT+ I+G AYG++ Sbjct: 211 SAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSAGEEAGIKSATIEIEGRYAYGYI 270 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGG 240 GE+G HR+VR SP++S R TSFS + V P+ D+S+ +E+ E D I RA G GG Sbjct: 271 SGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPDESMNVELPEEDLEISFSRAGGKGG 330 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q+VN ++AVRITHIPTGV V+C +ERSQ NK +A + L+AKL + ++R Sbjct: 331 QNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIR 390 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG+QIR+YV PY++VKD+RT E + V+DG+L+ F+KA L K Sbjct: 391 GDAVKAEWGQQIRNYVFHPYKLVKDVRTGYETSDIVSVMDGELEPFIKAYLKYK 444 >gi|312793258|ref|YP_004026181.1| peptide chain release factor 1 [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180398|gb|ADQ40568.1| peptide chain release factor 1 [Caldicellulosiruptor kristjanssonii 177R1B] Length = 355 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 117/343 (34%), Positives = 177/343 (51%), Gaps = 11/343 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ L K DP + E + LM+E +L + +E + L EL Sbjct: 5 LQVIEEKYLELEKKIADPEIISQPQEWQKLMKEHSNLQPIVEKFREYKRILNTIKEAEEL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 + D + + L + K + E + L D + +E+ AGAGG E+ Sbjct: 65 LDTDLDEDFEKLVKEELNQAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAGGEEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AE++ +K E + + + G K +I G AY LK E GVHR+ Sbjct: 125 LFAAELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + +E+EI E D IDT+RA GAGGQHVN T+SAVR Sbjct: 185 RVPVTESGGRIHTSTATVAVLP-EVEDVEVEIREEDLEIDTFRAGGAGGQHVNKTESAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 I H PTG+VV CQ ERSQH N+ +A +LRA+LY+ +++ ++++G G Sbjct: 244 IVHKPTGIVVTCQDERSQHANRDRAMKILRARLYDYYQSIQQKEIE--SQRRSQVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R + VLDG+LD+ + A + Sbjct: 302 SERIRTYNF-PQGRVTDHRIGLTLYKLEQVLDGELDEIIDALI 343 >gi|324997823|ref|ZP_08118935.1| peptide chain release factor 2 [Pseudonocardia sp. P1] Length = 368 Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 153/353 (43%), Positives = 222/353 (62%), Gaps = 2/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L+ + + D Q + L+ + P LW +V A+ + + + + ++ Sbjct: 12 LDTTLSSIEAVADVPRLRQEIEELSEQAGRPDLWDDVEAAQKITSRLAYAQGDLRRLDDL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L ELA +E D + + + + R++ E+ + +LLSGE D +A + + Sbjct: 72 RRRLDDLPVLYELAEDEGDQAAVADADADRARLRSEIASLEVRTLLSGEYDEREALVTIR 131 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A MLLRMY RWAE+ + T+ E EEAGIKSAT + P A+G L Sbjct: 132 SEAGGIDAADFAEMLLRMYLRWAERHGYGTDVFETSYAEEAGIKSATFAVHAPYAFGTLS 191 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRLVRISP+D+ RR TSF+ + V PVV+ S +EI E D R+D +RASG GGQ Sbjct: 192 VEAGTHRLVRISPFDNQGRRQTSFAGVEVAPVVESSDHVEIDEKDLRVDVFRASGPGGQG 251 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A +L+AKL + Q+ E+ + + S Sbjct: 252 VNTTDSAVRLTHIPTGIVVACQNERSQLQNKASAMVVLQAKLLDRRRQEERELMDSFKDS 311 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+R+YVL PYQ+VKDLRT E+ +PS VLDG++DDF++A + ++ Sbjct: 312 GS--SWGNQMRNYVLHPYQLVKDLRTEHEEGNPSQVLDGEIDDFIEAGIRWRR 362 >gi|213967224|ref|ZP_03395373.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato T1] gi|301381040|ref|ZP_07229458.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato Max13] gi|302060378|ref|ZP_07251919.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato K40] gi|302134868|ref|ZP_07260858.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928066|gb|EEB61612.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato T1] Length = 360 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 117/346 (33%), Positives = 175/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + RE ++ ++ K++ D L Sbjct: 9 LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYKQLARVQGDLEGAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + + Q L D + +LE+ AG GG E+ Sbjct: 69 LKDSDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AE+R ++ E L ++GE G K ++G + YG LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI+ +D R+DTYR+SGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + Q I K +G G Sbjct: 249 THLPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAANAIASERKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ S +VL G +D ++ LA + Sbjct: 307 ERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQ 351 >gi|148981991|ref|ZP_01816579.1| peptide chain release factor 1 [Vibrionales bacterium SWAT-3] gi|145960679|gb|EDK26023.1| peptide chain release factor 1 [Vibrionales bacterium SWAT-3] Length = 362 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 114/346 (32%), Positives = 182/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R + DP + + + + L +E L+ + Q D ++ Sbjct: 9 LETLVERYEEVQHLLGDPDVIGDQNKFRALSKEYSQLEEVTKCFQAYQQAQDDLEAAEDM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 A E+D+ + + + Q L D + +LE+ AGAGG E+ Sbjct: 69 AQEDDEEMREMAQEEIKEAKEAIERLTDELQILLLPKDPNDERNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AEK+ ++ E + +D E+ G K + G YG +K E G HR+ R Sbjct: 129 FAGNLFRMYSKFAEKKGWRVEVMSSNDSEQGGYKEMIAKVSGEGVYGVMKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RI Sbjct: 189 VPETESQGRVHTSACTVAVMPEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG VV+CQ ERSQHKNKA+A +L A++ + E ++R + ++ + +G G Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAE--VSDTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ ++VL+GD+ + L + Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTLYRLNEVLEGDMQSLIDPVLQEHQ 351 >gi|329296264|ref|ZP_08253600.1| peptide chain release factor 1 [Plautia stali symbiont] Length = 360 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 115/337 (34%), Positives = 177/337 (52%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + +E Q D L Sbjct: 9 LEALQERHEEVEALLGDAGVIGDQDRFRALSREYAQLSDVTRCFREWQQVQEDVETAEML 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE + + +E + L D ++EV AG GG E+ +A Sbjct: 69 LDDAEMRDMAQEELKLSRDKREVLEQQLQVLLLPKDPDDERPCFIEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +DGE G K I G AYG +K E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWQVEIMSANDGEHGGYKEVIARITGDGAYGRMKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ +I+ D +IDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVMPKLPEAELPDINPGDLKIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A +L A+++ E+ KR+ A + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALAVLGARIHAAEMAKRQ--AAEASTRRNLLGSGDSSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 IR+Y P V D R N+ + ++G LD ++ Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDTLIE 342 >gi|239831796|ref|ZP_04680125.1| peptide chain release factor 2 [Ochrobactrum intermedium LMG 3301] gi|239824063|gb|EEQ95631.1| peptide chain release factor 2 [Ochrobactrum intermedium LMG 3301] Length = 321 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 200/309 (64%), Positives = 258/309 (83%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ L+++I+ I + L D++ L+ + EE+D SI+Q+ + ++ +K E++ +Q + Sbjct: 1 MRERQQLEDSINGINHLTQTLNDSIELIAMGEEENDKSIIQDAENTIRELKEEIDRRQID 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LLSGEAD+ND Y+EVHAGAGGTESQDWA+MLLRMYTRWAE+ K E +E+H+GEEAGI Sbjct: 61 MLLSGEADANDTYVEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+L+KG N+YG +K E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+I+++++E Sbjct: 121 KSATILVKGHNSYGMMKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIDVQVTE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KRE + ++KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG + Sbjct: 241 EEELKKREAATDAANATKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGSVTP 300 Query: 346 FMKATLAIK 354 FM+A LA + Sbjct: 301 FMEAALAHR 309 >gi|88861344|ref|ZP_01135974.1| Peptide chain release factor 1 (RF-1) [Pseudoalteromonas tunicata D2] gi|88816610|gb|EAR26435.1| Peptide chain release factor 1 (RF-1) [Pseudoalteromonas tunicata D2] Length = 361 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 114/346 (32%), Positives = 178/346 (51%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72 + V+R + + + + + L +E L++ + D + Sbjct: 9 LETLVERYEEVEALLSEASVISDQDRFRALSKEYAELEDVSKVFNAYRQAEQDLVAAEEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + + E +++ + Q L D+N+ YLEV AG GG E+ Sbjct: 69 FKDEDPDMRDMAQDEFKAAKAQLETLTDELQVLMLPKDPKDNNNVYLEVRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY R+AE +K+K E + ++GE G K I G YG LK E GVHR+ R Sbjct: 129 FAGDLFRMYARFAETQKWKVEIVSANEGEHGGYKEVIANISGTGVYGKLKFESGVHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P + ++ IEI+ +D ++DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRVHTSACTVAVMPEIPEAEAIEINAADIKVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTGVVV+CQ ERSQHKN+A+A ++L ++L + E +KR + +G G Sbjct: 249 THIPTGVVVECQDERSQHKNRAKAMSVLASRLQQAEDEKRHAE--EATQRRNLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ ++++ GDL + + + Sbjct: 307 ERIRTYNY-PQGRITDHRINLTLYKLNEIVSGDLLPIINPLVQEHQ 351 >gi|300702903|ref|YP_003744504.1| peptide chain release factor rf-1 [Ralstonia solanacearum CFBP2957] gi|299070565|emb|CBJ41860.1| peptide chain release factor RF-1 [Ralstonia solanacearum CFBP2957] Length = 356 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 119/344 (34%), Positives = 179/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +R +N N+ + + L RE L+ ++ + D EL Sbjct: 5 LDQLAERTVEINALLAREDATANLDQYRKLTREHAELEPVVAQYATWKQAEDDVATAQEL 64 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + ++ +R+ Q L D + +LE+ AG GG ES +A Sbjct: 65 LADPDMKAFAEDELRAARERMTALEAELQRLLLPKDPNDHRNIFLEIRAGTGGDESALFA 124 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE+++++ E + + G K + G AY LK E G HR+ R+ Sbjct: 125 GDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLKFESGGHRVQRVP 184 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D +I+I+ +D RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 185 ATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDTFRASGAGGQHINKTDSAVRITH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQH+NK +A +L A+L + Q+RE A + K+ IG G + Sbjct: 245 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKD--RQEREAQAKEASARKSLIGSGDRSDR 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ ++DGDLD+ + A + Sbjct: 303 IRTYNF-PQGRVTDHRINLTLYKIDALMDGDLDELLGTLAAEHQ 345 >gi|94500761|ref|ZP_01307290.1| peptide chain release factor 2 [Oceanobacter sp. RED65] gi|94427083|gb|EAT12064.1| peptide chain release factor 2 [Oceanobacter sp. RED65] Length = 310 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 167/308 (54%), Positives = 217/308 (70%), Gaps = 1/308 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 RER L+ + I ++ L D LL++++ EDD + E L ++ ++E +F Sbjct: 2 GRERSALEAVVQTIDDMDTGLSDCDELLQMSVAEDDADSVDEVVSELNELQAKLEKLEFR 61 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 + SGEAD N AYL++ AG+GGTE+QDWA M+LRMY RW E + FK E +E G+ AGI Sbjct: 62 RMFSGEADENSAYLDIQAGSGGTEAQDWAEMILRMYLRWGEAKGFKVELMEASAGDVAGI 121 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ +G A+GWL+ E GVHRLVR SP+DS+ RRHTSF+S++V P +DD+IEI+I+ Sbjct: 122 KSATIRFEGEYAFGWLRTETGVHRLVRKSPFDSSGRRHTSFASVFVSPEIDDNIEIDINP 181 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RID YRASGAGGQHVNTT+SAVRITH+PT V QCQ +RSQHKNK QA L+AKL+ Sbjct: 182 ADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVTQCQNQRSQHKNKDQAMKQLKAKLF 241 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ELE+QKR E SK++IGWG QIRSYVL +KDLRT +E + VLDG LD Sbjct: 242 ELEMQKRNADTQALEESKSDIGWGSQIRSYVLDD-ARIKDLRTGVENRNTQQVLDGALDP 300 Query: 346 FMKATLAI 353 FM+A+L Sbjct: 301 FMEASLKA 308 >gi|237737785|ref|ZP_04568266.1| peptide chain release factor 1 [Fusobacterium mortiferum ATCC 9817] gi|229419665|gb|EEO34712.1| peptide chain release factor 1 [Fusobacterium mortiferum ATCC 9817] Length = 358 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 120/347 (34%), Positives = 181/347 (52%), Gaps = 10/347 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R LN P + + + + + + KE + D + E Sbjct: 5 LEEVVRRFDELNEMLGSPEILSDPKKMMECNKALADITPLVEKYKEYKTLSEDLQFIKEN 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 E D + + ++ + ++ ++ + E E D + +E+ GAGG E+ Sbjct: 65 IRNEKDHDMREMMNEEQKELEEKLPEYEKELKILLLPKDENDDKNVIVEIRGGAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R+AE+RK+K E +E + GIK A I G AY LK E GVHR+ Sbjct: 125 LFAGDLFRMYNRYAERRKWKVEIIEKQEIGIGGIKEAVFSINGLGAYSRLKFESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P V+D E++I D +IDTYR+ GAGGQHVN TDSAVR Sbjct: 185 RVPETESAGRVHTSTATVAVLPEVEDVKEVKIDPKDLKIDTYRSGGAGGQHVNMTDSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VVQCQ ERSQ KN+ +A L +KLYE+E +K+ + + K ++G G Sbjct: 245 ITHLPTGIVVQCQDERSQLKNREKAMKHLVSKLYEMECEKQR--SQVESERKLQVGTGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R LDGD+D+ + A + + Sbjct: 303 SEKIRTYNF-PQGRITDHRIKFTVYQLDAFLDGDIDEMIDALITFNQ 348 >gi|325273244|ref|ZP_08139524.1| peptide chain release factor 1 [Pseudomonas sp. TJI-51] gi|324101621|gb|EGB99187.1| peptide chain release factor 1 [Pseudomonas sp. TJI-51] Length = 360 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 121/346 (34%), Positives = 175/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R L D + + + RE ++ + KE + D L Sbjct: 9 LEILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWRKVQDDLEGAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLE---VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + + Q L D + +LE+ AG GG E+ Sbjct: 69 LKDSDPDMREMAVEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AEKR ++ E L ++GE G K ++G N YG LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI+ +D R+DTYRASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ+ERSQHKN+A+A + L AKL + +Q I K +G G Sbjct: 249 THLPTGIVVECQEERSQHKNRARAMSWLSAKLND--MQTSAAQNAIASERKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ S D+L G +D ++ LA + Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYSLDDILSGGVDAVIEPLLAEYQ 351 >gi|306820801|ref|ZP_07454426.1| peptide chain release factor RF1 [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551191|gb|EFM39157.1| peptide chain release factor RF1 [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 357 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 113/351 (32%), Positives = 185/351 (52%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ ++ S L K DP + N + + LM+E L + +E D Sbjct: 1 MFENLGAVKEKFSELEKKISDPEIINNQEQWQKLMKEHADLSPVVKKYEEYLKANDDIKG 60 Query: 72 LLELALEEDDCSILQETSDNLQRIK----LEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 E+ E D + + L ++ ++ + L D + +E+ GAGG Sbjct: 61 AKEIIANESDEDLRDLAKEELSGLEEDLTKIIDELKILLLPKDPNDDKNVIVEIRGGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A +L RMY+ +A R++K E + ++ E G K +I G AY LK E GV Sbjct: 121 DEAALFAGVLFRMYSMYAANRRWKVELMSSNETEIGGYKEVVFMITGKGAYSRLKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P + +E+ + +D R+D +R+SG GGQ VNTTD Sbjct: 181 HRVQRVPETESQGRIHTSTVTVAVLP-EAEDVEVNLDLNDVRVDVFRSSGNGGQSVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V+ Q E+SQ KNK +A+ +L+AKLY++EL+K+++ + K+++G Sbjct: 240 SAVRLTHIPTGIVISMQDEKSQLKNKDKAFKILKAKLYDMELEKKQKE--MASQRKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V + R + L+GDLD+ + A + + Sbjct: 298 TGDRAERIRTYNY-PQGRVSEHRIGLNLYKLESFLNGDLDEIIDALITTDQ 347 >gi|148260683|ref|YP_001234810.1| peptide chain release factor 2 [Acidiphilium cryptum JF-5] gi|326403877|ref|YP_004283959.1| peptide chain release factor 2 [Acidiphilium multivorum AIU301] gi|146402364|gb|ABQ30891.1| bacterial peptide chain release factor 1 (bRF-1) [Acidiphilium cryptum JF-5] gi|325050739|dbj|BAJ81077.1| peptide chain release factor 2 [Acidiphilium multivorum AIU301] Length = 323 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 191/309 (61%), Positives = 239/309 (77%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 +RER L + I+ D L L ELA E D S+L E L+RI E + ++ E Sbjct: 2 LRERNRLATQTEAVHTIERETEDALTLAELAEAEGDQSVLAEAEAALRRISEEAKRREIE 61 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLL+GEAD ND YLEV+AGAGGTE+QDWA MLLRMYTRWAE+ +K LE +GE+AGI Sbjct: 62 SLLAGEADGNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTMLEESEGEQAGI 121 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ + G NAYGWLK E GVHRLVRISP+D+N+RR TSF+S+WVYPVVDDSIE+EI+ Sbjct: 122 KSATIQVSGMNAYGWLKTEAGVHRLVRISPFDANARRQTSFASVWVYPVVDDSIEVEINP 181 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D ++DT+RASGAGGQHVN T+SA+RITH+P+G++V CQ +RSQH+N+A A ML+++LY Sbjct: 182 ADLKVDTFRASGAGGQHVNKTESAIRITHVPSGIIVACQNDRSQHRNRATAMEMLKSRLY 241 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+ELQKREE A ES+K +IGWG QIRSYVL PYQ+VKDLRTN E +P VL+GDLD Sbjct: 242 EMELQKREEAAAASESAKRDIGWGHQIRSYVLAPYQLVKDLRTNFESGNPDAVLNGDLDA 301 Query: 346 FMKATLAIK 354 FM A+LA + Sbjct: 302 FMAASLASR 310 >gi|257791746|ref|YP_003182352.1| peptide chain release factor 2 [Eggerthella lenta DSM 2243] gi|317487783|ref|ZP_07946376.1| peptide chain release factor 2 [Eggerthella sp. 1_3_56FAA] gi|325831767|ref|ZP_08164956.1| peptide chain release factor 2 [Eggerthella sp. HGA1] gi|257475643|gb|ACV55963.1| peptide chain release factor 2 [Eggerthella lenta DSM 2243] gi|316913058|gb|EFV34574.1| peptide chain release factor 2 [Eggerthella sp. 1_3_56FAA] gi|325486436|gb|EGC88886.1| peptide chain release factor 2 [Eggerthella sp. HGA1] Length = 364 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 145/353 (41%), Positives = 211/353 (59%), Gaps = 2/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 K+++++ G D L+ L+ + P W + A+ + ++ L + I+ E Sbjct: 11 KVAQRVEAAHGYLHIDERAAELAKLDEEIAQPGFWDDASHAQSVSKQASVLRDTIAEYDE 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L +D +E S L ++ ++ + S S D DA L V Sbjct: 71 --AAALLDDARAAFDLASEDELFAEEASAALDKLDELLDALEISSWFSERFDGGDAILTV 128 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 + G+GG E+QDW +ML RMY R+AEK+ +K L++ GE G+ AT+ I+G NA+G L Sbjct: 129 NPGSGGLEAQDWTDMLYRMYVRYAEKKDWKVTVLDVVPGEGIGLDKATIQIEGRNAFGML 188 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISP D RRHT+F+ + V PV+ D IE++++ +D R+D YR+SG GGQ Sbjct: 189 KSESGVHRLVRISPTDDKKRRHTTFAGVEVLPVLPDDIEVDLNPADVRVDVYRSSGPGGQ 248 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVR+THIPT +VV CQ E+SQ +NK A+ +L+AKLYE E QKR+E Sbjct: 249 CVNTTDSAVRLTHIPTNIVVTCQNEKSQLQNKEAAFRVLKAKLYEREEQKRQEELAELRG 308 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + + +G QIR+YVL PYQMVKD+R+ IE + VLDG+LD+F+ + Sbjct: 309 DRMDNTFGSQIRNYVLYPYQMVKDVRSGIETGNVDAVLDGELDEFVIGYHRWR 361 >gi|167766740|ref|ZP_02438793.1| hypothetical protein CLOSS21_01246 [Clostridium sp. SS2/1] gi|167711494|gb|EDS22073.1| hypothetical protein CLOSS21_01246 [Clostridium sp. SS2/1] Length = 366 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 121/352 (34%), Positives = 181/352 (51%), Gaps = 12/352 (3%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD + V RL + + DP + N + LM+E+ L + KE + + Sbjct: 9 KMFDKLEGLVDRLDTVLQELNDPDVAGNQNRFRDLMKEQNELTPIVEKYKEYKAEKQNIE 68 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAG 126 L L EE D + + + L K VE + + D + +E+ AGAG Sbjct: 69 DSLMLLEEESDEEMKELAKEELNESKANVERLEEELKILLIPKDPMDDKNIIVEMRAGAG 128 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ + + RMY +AE +++K L ++ G K ++ G AY K E G Sbjct: 129 GDEAGLFVADVARMYRSYAESKRWKVNTLSFNESGIGGFKELVFMVSGQGAYSRFKYESG 188 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ RI +S R HTS ++ + P + +E+EI +DC+ D +RASG GGQ VNTT Sbjct: 189 VHRVQRIPATESGGRIHTSTITVAIMP-EVEDVEVEIDMNDCKFDVFRASGNGGQCVNTT 247 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVR+THIPTG+VV CQ E+SQ KNK +A +LR++LYELE QK K++I Sbjct: 248 DSAVRLTHIPTGIVVSCQDEKSQLKNKDKALKVLRSRLYELEQQK--AHDEEAAKRKSQI 305 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R + +++GDLD+ + + A + Sbjct: 306 GTGDRSEKIRTYNY-PQGRVTDHRIKLTLHKLDSIMNGDLDELIDSLTAADQ 356 >gi|332306089|ref|YP_004433940.1| peptide chain release factor 1 [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173418|gb|AEE22672.1| peptide chain release factor 1 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 362 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 117/339 (34%), Positives = 184/339 (54%), Gaps = 9/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R + P + + + + L +E L+ + + Q D E+ Sbjct: 9 LESLTERFEEVQALVSQPEIIADQDKYRALTKEYSQLEGVVKCFADYQSAQQDFESAQEM 68 Query: 76 ALEEDDCSILQETSDNLQR---IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E D + I+ + Q L D ++ ++E+ AGAGG E+ Sbjct: 69 MQESDPEMREMAQEEYKSSKLAIEQYEDELQILLLPKDPNDESNCFVEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE R++K E + +++G+ G K I G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAEARRWKVEVVTMNEGDHGGYKEVIANIIGDGAYGILKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P V +S IE++++D +IDT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRIHTSACTVVVMPEVAESEAIEVNKADLKIDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+P+G+VV+CQ ERSQHKN+A+A +L+++L +LE +KR+ + + + G Sbjct: 249 THVPSGIVVECQDERSQHKNRAKAMAVLQSRLNQLEEEKRQAE--ETSTRRNLVASGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +IR+Y P V D R N+ DV+ GDLD ++ Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYRLDDVVAGDLDAVLE 344 >gi|315607246|ref|ZP_07882247.1| peptide chain release factor RF2 [Prevotella buccae ATCC 33574] gi|315251063|gb|EFU31051.1| peptide chain release factor RF2 [Prevotella buccae ATCC 33574] Length = 373 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 122/357 (34%), Positives = 206/357 (57%), Gaps = 12/357 (3%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 + L D D +T+ P W++ A+ M++ + ++ + KE++ Sbjct: 12 ERAEALHRYLDIDKKKVEFEEEQLRTQAPDFWEDPARAQEQMKKVKSIEKWLDGYKEVRQ 71 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 + + + DD +E + + +E + +++L + D +A +++++G Sbjct: 72 YADELQLAFDFF--HDDMVSEEEVDADYAKAIKAIEALELKNMLRQKEDPMEAVIKINSG 129 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWLKG 183 AGGTESQDWA+ML+RMY RW E ++ + +G+EAGIKS T+ ++ G AYG+LK Sbjct: 130 AGGTESQDWASMLMRMYMRWCEAHGYRCTVSNLQEGDEAGIKSVTMEVEGGEYAYGYLKS 189 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR+SP+++ +R TSF+S++V P+VDD+IE+ + + DT+R+ GAGGQ+V Sbjct: 190 ENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDTIEVFVDPARLSWDTFRSGGAGGQNV 249 Query: 244 NTTDSAVRITH--------IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 N +S VR+ + ++++ + R Q KN+A+A +L+++LY+ ++KR E Sbjct: 250 NKVESGVRLRYWYQDPDTGEEEEILIENTETRDQPKNRAKAMLLLKSQLYDRAMKKRLEA 309 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ K +I WG QIRSYV + VKD RTN + V+DG +D+F+KA L Sbjct: 310 QAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTADVDGVMDGKIDEFIKAYLM 365 >gi|153009595|ref|YP_001370810.1| peptide chain release factor 2 [Ochrobactrum anthropi ATCC 49188] gi|151561483|gb|ABS14981.1| peptide chain release factor 2 [Ochrobactrum anthropi ATCC 49188] Length = 321 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 202/309 (65%), Positives = 259/309 (83%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ L+++I+ I ++ L D++ L+ + EEDD SI+Q+ + ++ +K E++ +Q + Sbjct: 1 MRERQQLEDSINGINHLKQTLNDSIELIAMGEEEDDKSIIQDAENTIRELKQEIDRRQID 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LLSGEAD+ND Y+EVHAGAGGTESQDWA+MLLRMYTRWAE+ K E +E+H+GEEAGI Sbjct: 61 MLLSGEADANDTYVEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+L+KG N+YG +K E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+I+++++E Sbjct: 121 KSATILVKGHNSYGMMKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIDVQVTE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KRE + ++KTEIGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG + Sbjct: 241 EEELKKREAATDAANATKTEIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGSVTP 300 Query: 346 FMKATLAIK 354 FM+A LA + Sbjct: 301 FMEAALAHR 309 >gi|296159488|ref|ZP_06842312.1| peptide chain release factor 1 [Burkholderia sp. Ch1-1] gi|295890196|gb|EFG69990.1| peptide chain release factor 1 [Burkholderia sp. Ch1-1] Length = 356 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 119/344 (34%), Positives = 180/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D RL+ LN + N+ + + L RE L + + + D EL Sbjct: 5 LDQLTTRLAELNDLLSREDITSNLDQYRKLTREHAELGPVVEHYALWRQAMNDAATAQEL 64 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + +E +R+ Q L D + +LE+ AG GG ES +A Sbjct: 65 LADASMRDFAEEEIRAARERMDKLGAELQKMLLPKDPNDDRNIFLEIRAGTGGDESALFA 124 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE+ +++ E + + + G K + I G AY LK E G HR+ R+ Sbjct: 125 GDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESGGHRVQRVP 184 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH Sbjct: 185 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G + Sbjct: 245 LPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QSHEQQAKEAATRKSLIGSGDRSER 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++DGDLD+ + A ++ + Sbjct: 303 IRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELIAALVSEHQ 345 >gi|288574777|ref|ZP_06393134.1| peptide chain release factor 1 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570518|gb|EFC92075.1| peptide chain release factor 1 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 358 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 112/346 (32%), Positives = 175/346 (50%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72 + K DP + N E + L ++ L + +E + L + L Sbjct: 7 LQEIAATHEEIEHKMADPSVTSNPKELQSLGKKHAELSEIVEAYEEYKRIRSELEEAKAL 66 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L+ E +E ++ + + L D +E+ AG GG E+ Sbjct: 67 LDSDDPEMAQLAKEEVHSLEPLLEEQEKKVTLLLLPKDPNDDKSVMVEIRAGTGGDEAAL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A+ L RMY+R+AE+R++ E L+ ++ E G K + G AY LK E GVHR+ R Sbjct: 127 FASDLFRMYSRFAEQRRWSVEILDANETEIGGYKEIVFKVDGQGAYSDLKYESGVHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS +++ V P ++ + + D +IDTYR+SGAGGQHVN TDSAVRI Sbjct: 187 VPATESGGRIHTSAATVAVLPEAEEFDVE-VRQEDLKIDTYRSSGAGGQHVNMTDSAVRI 245 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV CQ ERSQ KN+A+A LR KLY++E +KR++ + K +IG G Sbjct: 246 THLPTGIVVTCQDERSQIKNRARAMAFLRTKLYDMEQRKRQD--AEAQERKGQIGSGDRS 303 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + + G + + ++A ++ Sbjct: 304 ERIRTYNF-PQNRITDHRIGLTLYKLDAAMGGSITELVEALRMAEQ 348 >gi|313497099|gb|ADR58465.1| PrfA [Pseudomonas putida BIRD-1] Length = 360 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 121/346 (34%), Positives = 175/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R L D + + + RE ++ + KE + D L Sbjct: 9 LEILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWRKVQDDLEGAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLE---VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + + Q L D + +LE+ AG GG E+ Sbjct: 69 LKDSDPDLREMAVEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AEKR ++ E L ++GE G K ++G N YG LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI+ +D R+DTYRASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ+ERSQHKN+A+A + L AKL + +Q I K +G G Sbjct: 249 THLPTGIVVECQEERSQHKNRARAMSWLSAKLND--MQTSAAQNAIASERKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ S D+L G +D ++ LA + Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYSLDDILSGGVDAVIEPLLAEYQ 351 >gi|119477466|ref|ZP_01617657.1| peptide chain release factor 1 [marine gamma proteobacterium HTCC2143] gi|119449392|gb|EAW30631.1| peptide chain release factor 1 [marine gamma proteobacterium HTCC2143] Length = 361 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 113/341 (33%), Positives = 174/341 (51%), Gaps = 9/341 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 DN V R L D + + + + L +E ++ + + L D L Sbjct: 9 LDNLVDRHEELGALLSDGEVIGDQNKYRALSKEYAEVEPVVKCYENYCQTLDDIEEAKSL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL---LSGEADSNDAYLEVHAGAGGTESQD 132 + D + + DS++ +LE+ AG GG E+ Sbjct: 69 LKDGDADMREMAQEELSGAQSQRDVMMEELQRLLLPRDPNDSHNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMYTR+AE + +K E + G+ G K + G + Y LK E G HR+ R Sbjct: 129 FSGDLFRMYTRYAENKGWKIEIISERSGDHGGYKELISRVSGQDVYAHLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ + P VD E+EI++SD RIDT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRVHTSACTVAIMPEVDSVDEVEINKSDLRIDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIP+G+VV+CQ ERSQHKNKA+A ++L+++L K+++ + ++ +G G Sbjct: 249 THIPSGLVVECQDERSQHKNKARAMSLLQSRLLTGIQDKQQQEQ--SDERRSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R N+ ++V++G L D + Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLAEVMEGALGDVIDPL 346 >gi|150004050|ref|YP_001298794.1| peptide chain release factor RF-2 [Bacteroides vulgatus ATCC 8482] gi|254882894|ref|ZP_05255604.1| peptide chain release factor RF-2 [Bacteroides sp. 4_3_47FAA] gi|294778088|ref|ZP_06743522.1| peptide chain release factor 2-like protein [Bacteroides vulgatus PC510] gi|319639698|ref|ZP_07994431.1| peptide chain release factor RF-2 [Bacteroides sp. 3_1_40A] gi|149932474|gb|ABR39172.1| peptide chain release factor RF-2 [Bacteroides vulgatus ATCC 8482] gi|254835687|gb|EET15996.1| peptide chain release factor RF-2 [Bacteroides sp. 4_3_47FAA] gi|294448146|gb|EFG16712.1| peptide chain release factor 2-like protein [Bacteroides vulgatus PC510] gi|317388662|gb|EFV69508.1| peptide chain release factor RF-2 [Bacteroides sp. 3_1_40A] Length = 371 Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats. Identities = 139/358 (38%), Positives = 208/358 (58%), Gaps = 11/358 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L D +N + ++ +T+ P W + +A+ MR+ + L I +E+ Sbjct: 10 VKERTAALERYLDIENKLVQVEEEQLRTQAPGFWDDAKKAEAQMRKVKDLQKWIDGYREV 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + + DD +E Q+ VE + +++L EAD D L+++ Sbjct: 70 KTMADELELAFDFCK--DDLVTEEEVDAAYQKAVTAVEALELKNMLRQEADQMDCVLKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+ML+RMY RWAE +K + DG+EAGIK+ T+ I+G AYG+LK Sbjct: 128 CGAGGTESQDWASMLMRMYMRWAETNGYKVSVANLQDGDEAGIKTVTMNIEGSFAYGYLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVR+SPY++ +R TSF+S++V P+VDDSIE+ I + DT+R+ GAGGQ+ Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVTIEPARMSWDTFRSGGAGGQN 247 Query: 243 VNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 VN +S VR+ + ++++ + R Q KNK A LR+ LY+ ELQ R E Sbjct: 248 VNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNKENAMRQLRSILYDKELQHRME 307 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ K +I WG QIRSYV + VKD RTN + + + V+DG +D F+KA L Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYLM 364 >gi|281425018|ref|ZP_06255931.1| peptide chain release factor 2 [Prevotella oris F0302] gi|281400862|gb|EFB31693.1| peptide chain release factor 2 [Prevotella oris F0302] Length = 378 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 129/359 (35%), Positives = 206/359 (57%), Gaps = 12/359 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++ + + L D +T+ P W + A+ MR+ + ++ + Sbjct: 10 ITERTDALHRYLGIDQKKIEFEEEQLRTQAPDFWDDPKRAEAQMRKVKGIEKWLKGYNAC 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + + D+ +E + + VE + +++L E DS DA L+++ Sbjct: 70 RQLTDELQLAFDFYK--DEMVSEEEVDADYAKAVKAVEDLELKNMLRQEEDSMDAVLKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PNAYGWL 181 +GAGGTESQDWA ML+RMY RW+E + + +I DG+EAGIKS T+ I+G AYG+L Sbjct: 128 SGAGGTESQDWAQMLMRMYQRWSESHGYTVKVTDIQDGDEAGIKSVTMTIEGGDYAYGYL 187 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVR+SPY++ +R TSF+S++V P+VDD+IE+ + + DT+R+SGAGGQ Sbjct: 188 KSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVYVDPAKVSWDTFRSSGAGGQ 247 Query: 242 HVNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 +VN +S VR+ + ++++ + R Q KN+A+A +L+++LY+ L+KR+ Sbjct: 248 NVNKVESGVRLRYQYEDPDTGEHEEILIENTETRDQPKNRAKAMLLLKSQLYDRALKKRQ 307 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ K +I WG QIRSYV + VKD RT + + V+DG LD F+KA L Sbjct: 308 AEQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTGFQTSDVDAVMDGKLDGFIKAYLM 365 >gi|160891387|ref|ZP_02072390.1| hypothetical protein BACUNI_03837 [Bacteroides uniformis ATCC 8492] gi|270295480|ref|ZP_06201681.1| conserved hypothetical protein [Bacteroides sp. D20] gi|317478476|ref|ZP_07937636.1| peptide chain release factor 2 [Bacteroides sp. 4_1_36] gi|156858794|gb|EDO52225.1| hypothetical protein BACUNI_03837 [Bacteroides uniformis ATCC 8492] gi|270274727|gb|EFA20588.1| conserved hypothetical protein [Bacteroides sp. D20] gi|316905365|gb|EFV27159.1| peptide chain release factor 2 [Bacteroides sp. 4_1_36] Length = 371 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 132/358 (36%), Positives = 205/358 (57%), Gaps = 11/358 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L D + ++ +T+ P W + A+ M++ + L IS E+ Sbjct: 10 IKERTEALNRYLDIEGKKIQVEEEQLRTQAPGFWDDQKAAEAQMKKVKGLQQWISGYNEV 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + + D+ +E D + VE + +++L EAD D L+++ Sbjct: 70 KTLTDEVQLAFDFYK--DELVTEEEVDDAYAKAITAVEALELKNMLREEADQMDCVLKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDWA+ML+RMY R+AE +K + +G+EAGIK+ T+ I G AYG+LK Sbjct: 128 SGAGGTESQDWASMLMRMYLRYAETHGYKATIANLQEGDEAGIKTCTIEISGDYAYGYLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVR+SPY++ +R TSF+S++V P+VDD+IE+ I + DT+R+ GAGGQ+ Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVNIEPARMSWDTFRSGGAGGQN 247 Query: 243 VNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 VN +S VR+ + ++++ + R Q KN+ A +LR+ LY+ ELQ R Sbjct: 248 VNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNRENALRLLRSMLYDKELQHRMA 307 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ K +I WG QIRSYV + VKD RTN + + + V+DG +D F+KA L Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYLM 364 >gi|302390589|ref|YP_003826410.1| bacterial peptide chain release factor 1 (bRF-1) [Thermosediminibacter oceani DSM 16646] gi|302201217|gb|ADL08787.1| bacterial peptide chain release factor 1 (bRF-1) [Thermosediminibacter oceani DSM 16646] Length = 364 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 123/352 (34%), Positives = 190/352 (53%), Gaps = 13/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D D +R L + +P + E + L +E L+ +S +E + + + Sbjct: 1 MLDKLDAIEERYEELTREISEPAVIARQEEWRKLAKEHASLEEIVSCYREYKKVVSEIKE 60 Query: 72 LLELALEEDDCSILQETSDN-----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 EL E + ++E +R K E + L D D +E+ AGAG Sbjct: 61 SRELLKETSNDREMEEFIKEELENLQKREKELQERLKILLLPKDPNDEKDVIMEIRAGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L RMYTR+AE++ +K E + E G K + G AY LK E G Sbjct: 121 GEEAALFAGDLFRMYTRYAERQGWKVELMSSSPTELGGFKEVIFEVMGRGAYSRLKYESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ RI ++ R HTS +++ V P + +++EI+ ++ RID +R+SG GGQ VNTT Sbjct: 181 VHRVQRIPVTEAGGRIHTSTATVAVLP-EAEEVDVEINPNELRIDVFRSSGHGGQSVNTT 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PTG+VV CQ ERSQ KN+ +A +LRAKL LE+++RE+ I +S ++++ Sbjct: 240 DSAVRITHLPTGIVVTCQDERSQLKNRDKAMKILRAKL--LEMKQREQNEKIAQSRRSQV 297 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R ++LDG+LD+ ++ +A + Sbjct: 298 GTGDRSERIRTYNF-PQGRVTDHRIGFTTHQLENILDGELDELIERLIAEDQ 348 >gi|307731136|ref|YP_003908360.1| peptide chain release factor 1 [Burkholderia sp. CCGE1003] gi|307585671|gb|ADN59069.1| peptide chain release factor 1 [Burkholderia sp. CCGE1003] Length = 360 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 119/344 (34%), Positives = 180/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D RL+ LN + N + + L RE L + + + D EL Sbjct: 9 LDQLTTRLAELNDLLSREDITSNRDQYRKLTREHAELGPVVEQYALWRQAMHDAATAQEL 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + +E +R++ Q L D + +LE+ AG GG ES +A Sbjct: 69 LADASMREFAEEEIRAARERMEQLGGKLQTMLLPKDPNDDRNIFLEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE+ +++ E + + + G K + I G AY LK E G HR+ R+ Sbjct: 129 GDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G + Sbjct: 249 LPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QSHEQQAKEAATRKSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++DGDLD+ + A ++ + Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELIGALVSEHQ 349 >gi|212692934|ref|ZP_03301062.1| hypothetical protein BACDOR_02434 [Bacteroides dorei DSM 17855] gi|237708323|ref|ZP_04538804.1| peptide chain release factor RF-2 [Bacteroides sp. 9_1_42FAA] gi|237723533|ref|ZP_04554014.1| peptide chain release factor RF-2 [Bacteroides sp. D4] gi|265757045|ref|ZP_06090907.1| peptide chain release factor RF-2 [Bacteroides sp. 3_1_33FAA] gi|212664519|gb|EEB25091.1| hypothetical protein BACDOR_02434 [Bacteroides dorei DSM 17855] gi|229438084|gb|EEO48161.1| peptide chain release factor RF-2 [Bacteroides dorei 5_1_36/D4] gi|229457544|gb|EEO63265.1| peptide chain release factor RF-2 [Bacteroides sp. 9_1_42FAA] gi|263233544|gb|EEZ19173.1| peptide chain release factor RF-2 [Bacteroides sp. 3_1_33FAA] Length = 371 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 138/358 (38%), Positives = 208/358 (58%), Gaps = 11/358 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L D +N + ++ +T+ P W + +A+ MR+ + L I +E+ Sbjct: 10 VKERTAALERYLDIENKLVQVEEEQLRTQAPGFWDDAKKAEAQMRKVKDLQKWIDGYREV 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + + DD +E Q+ VE + +++L EAD D L+++ Sbjct: 70 KTMADELELAFDFCK--DDLVTEEEVDAAYQKAVTAVEALELKNMLRQEADQMDCVLKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+ML+RMY RWAE +K + DG+EAGIK+ T+ I+G +YG+LK Sbjct: 128 CGAGGTESQDWASMLMRMYMRWAETNGYKVSVANLQDGDEAGIKTVTMNIEGSFSYGYLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVR+SPY++ +R TSF+S++V P+VDDSIE+ I + DT+R+ GAGGQ+ Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVTIEPARMSWDTFRSGGAGGQN 247 Query: 243 VNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 VN +S VR+ + ++++ + R Q KNK A LR+ LY+ ELQ R E Sbjct: 248 VNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNKENAMRQLRSILYDKELQHRME 307 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ K +I WG QIRSYV + VKD RTN + + + V+DG +D F+KA L Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYLM 364 >gi|71736680|ref|YP_273268.1| peptide chain release factor 1 [Pseudomonas syringae pv. phaseolicola 1448A] gi|257482007|ref|ZP_05636048.1| peptide chain release factor 1 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289627918|ref|ZP_06460872.1| peptide chain release factor 1 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647287|ref|ZP_06478630.1| peptide chain release factor 1 [Pseudomonas syringae pv. aesculi str. 2250] gi|298485681|ref|ZP_07003760.1| Peptide chain release factor 1 [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|119361578|sp|Q48MV4|RF1_PSE14 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|71557233|gb|AAZ36444.1| peptide chain release factor 1 [Pseudomonas syringae pv. phaseolicola 1448A] gi|298159707|gb|EFI00749.1| Peptide chain release factor 1 [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320325690|gb|EFW81751.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea str. B076] gi|320327391|gb|EFW83405.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea str. race 4] gi|330868898|gb|EGH03607.1| peptide chain release factor 1 [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330881882|gb|EGH16031.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea str. race 4] gi|330887864|gb|EGH20525.1| peptide chain release factor 1 [Pseudomonas syringae pv. mori str. 301020] gi|330988605|gb|EGH86708.1| peptide chain release factor 1 [Pseudomonas syringae pv. lachrymans str. M301315] Length = 360 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 116/346 (33%), Positives = 175/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + RE ++ ++ +++ D L Sbjct: 9 LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYQQLIRVQGDLEGAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + + Q L D + +LE+ AG GG E+ Sbjct: 69 LKDSDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AE+R ++ E L ++GE G K ++G + YG LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI+ +D R+DTYR+SGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + Q I K +G G Sbjct: 249 THLPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAANAIASERKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ S +VL G +D ++ LA + Sbjct: 307 ERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQ 351 >gi|269138757|ref|YP_003295458.1| peptide chain release factor 1 [Edwardsiella tarda EIB202] gi|267984418|gb|ACY84247.1| peptide chain release factor 1 [Edwardsiella tarda EIB202] gi|304558750|gb|ADM41414.1| Peptide chain release factor 1 [Edwardsiella tarda FL6-60] Length = 360 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 116/337 (34%), Positives = 180/337 (53%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + + + D + Sbjct: 9 LEALQERHEEVQALLGDAGVIADQDRFRALSREYAQLTDVSHCFLDWRQVQDDLATAEMM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE + ++E Q L D D +LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQEEIKAARGRLADLEQHLQILLLPKDPDDERDCFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +GE G K + G AYG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRIEIMSASEGEHGGYKEVIAKVSGDGAYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P V ++ +I+ +D RIDTYR+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPAVPEAELPQINPADLRIDTYRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR++ + + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEIAKRQQE--VASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +R+Y P V D R N+ +V++G LD+ ++ Sbjct: 307 VRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDNLIE 342 >gi|323527482|ref|YP_004229635.1| peptide chain release factor 1 [Burkholderia sp. CCGE1001] gi|323384484|gb|ADX56575.1| peptide chain release factor 1 [Burkholderia sp. CCGE1001] Length = 356 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 119/344 (34%), Positives = 180/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D RL+ LN + N+ + + L RE L + + + D EL Sbjct: 5 LDQLTTRLAELNDLLSREDITSNLDQYRKLTREHAELGPVVEHYALWRQAMHDAATAQEL 64 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + +E R++ Q L D + +LE+ AG GG ES +A Sbjct: 65 LTDASMRDFAEEEIRAARDRMEQLGGELQTMLLPKDPNDDRNIFLEIRAGTGGDESALFA 124 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE+ +++ E + + + G K + I G AY LK E G HR+ R+ Sbjct: 125 GDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESGGHRVQRVP 184 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH Sbjct: 185 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G + Sbjct: 245 LPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QSHEQQAKEAATRKSLIGSGDRSER 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++DGDLD+ + A ++ + Sbjct: 303 IRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELIGALVSEHQ 345 >gi|301100688|ref|XP_002899433.1| peptide chain release factor, putative [Phytophthora infestans T30-4] gi|262103741|gb|EEY61793.1| peptide chain release factor, putative [Phytophthora infestans T30-4] Length = 378 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 156/334 (46%), Positives = 216/334 (64%), Gaps = 3/334 (0%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q L+ L + DP LW + A +++ L++ + + E+ + D L LA EE+ Sbjct: 32 QELAELRQEAADPKLWDDASNAASVVQRLAALESRETRVHELHRQFLDTKELYVLAKEEE 91 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D S+L + + ++ E + + E LLS E D++ +LE+ AGAGGT+S DW ML RM Sbjct: 92 DESMLGDCVSAMTVVRAEAQQLRLEFLLSHETDAHSCFLEIQAGAGGTDSCDWTAMLARM 151 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y RW+E R F+ + ++ G+EAG +S L + G AYGW K E GVHRLVRISP+DS Sbjct: 152 YARWSEMRGFQVQYVDESVGDEAGFRSVVLKLDGVYAYGWAKNEAGVHRLVRISPFDSAG 211 Query: 201 RRHTSFSSIWVYPVV---DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 RRHTSF+ + VYP+ S EIE+S D RIDT+R+SG GGQHVN+TDSA+RITH+ T Sbjct: 212 RRHTSFAQVRVYPMAAEGRSSAEIEVSTKDLRIDTFRSSGPGGQHVNSTDSAIRITHLRT 271 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G+VVQ Q +RSQH+NKA+A MLRAKLY+ +L++ + + WG QIRSYVL Sbjct: 272 GIVVQSQSDRSQHRNKAEAMAMLRAKLYQRKLEEEAKARQKFAQGLGDNAWGNQIRSYVL 331 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 PYQ+VKD RTN + + + VLDGD+D F++ L Sbjct: 332 HPYQLVKDHRTNYSEGNIAQVLDGDIDRFIEKML 365 >gi|260767753|ref|ZP_05876688.1| peptide chain release factor 1 [Vibrio furnissii CIP 102972] gi|260617262|gb|EEX42446.1| peptide chain release factor 1 [Vibrio furnissii CIP 102972] gi|315179416|gb|ADT86330.1| peptide chain release factor 1 [Vibrio furnissii NCTC 11218] Length = 362 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 119/346 (34%), Positives = 182/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72 ++ V+R + DP + + + + L +E L+ + Q D + Sbjct: 9 LESLVERYEEVQHLLGDPAVIGDQDKFRALSKEYSQLEEITHCFQAYQQAQDDLSAAEEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + E E I+ + Q L D + +LE+ AGAGG E+ Sbjct: 69 AKEDDAEMREMAQDEIKVAKAEIERLSDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AEKR ++ E + ++ E G K + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRFAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V V ++ EI +D +IDT+R+SGAGGQHVNTTDSA+RI Sbjct: 189 VPATESQGRVHTSACTVAVMAEVPEAEIPEIRTADLKIDTFRSSGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR A I ++ + +G G Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLAARIAKAEEEKR--AAAISDTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ S+V++GDL + + + Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTVYRLSEVMEGDLQSLVDPVIQEHQ 351 >gi|148546007|ref|YP_001266109.1| peptide chain release factor 1 [Pseudomonas putida F1] gi|166223590|sp|A5VYG5|RF1_PSEP1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|148510065|gb|ABQ76925.1| bacterial peptide chain release factor 1 (bRF-1) [Pseudomonas putida F1] Length = 360 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 121/346 (34%), Positives = 175/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R L D + + + RE ++ + KE + D L Sbjct: 9 LEILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWRKVQDDLEGAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLE---VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + + Q L D + +LE+ AG GG E+ Sbjct: 69 LKDSDPDLREMALEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AEKR ++ E L ++GE G K ++G N YG LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI+ +D R+DTYRASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ+ERSQHKN+A+A + L AKL + +Q I K +G G Sbjct: 249 THLPTGIVVECQEERSQHKNRARAMSWLSAKLND--MQTSAAQNAIASERKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ S D+L G +D ++ LA + Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYSLDDILSGGVDAVIEPLLAEYQ 351 >gi|91785343|ref|YP_560549.1| peptide chain release factor 1 [Burkholderia xenovorans LB400] gi|119361518|sp|Q13TU2|RF1_BURXL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|91689297|gb|ABE32497.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia xenovorans LB400] Length = 360 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 119/344 (34%), Positives = 180/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D RL+ LN + N+ + + L RE L + + + D EL Sbjct: 9 LDQLTTRLAELNDLLSREDITSNLDQYRKLTREHAELGPVVEHYALWRQAMNDAATAQEL 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + +E +R+ Q L D + +LE+ AG GG ES +A Sbjct: 69 LADASMRDFAEEEIRAARERMDKLGAELQKMLLPKDPNDDRNIFLEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE+ +++ E + + + G K + I G AY LK E G HR+ R+ Sbjct: 129 GDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G + Sbjct: 249 LPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QSHEQQAKEAATRKSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++DGDLD+ + A ++ + Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELIAALVSEHQ 349 >gi|295111719|emb|CBL28469.1| bacterial peptide chain release factor 1 (bRF-1) [Synergistetes bacterium SGP1] Length = 357 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 108/346 (31%), Positives = 168/346 (48%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + + DP + + L ++R L+ + + + + +L Sbjct: 7 LQAIEKEFLDIEERMGDPATASDPRALQDLGKKRAQLEPVVEKYRAYRAAVASIAEARDL 66 Query: 76 ALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 D + +I+ + L D +E+ AG GG E+ Sbjct: 67 LKGGDPEIAELAREELSELEPQIENFEKELTILLLPKDPNDEKSVIVEIRAGVGGDEAAL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMYTR+ E++++K E ++ G K I AY +K E G HR+ R Sbjct: 127 FAADLYRMYTRFCERQRWKIEVIDSSLIGLGGYKEVIFRIDSHGAYSMMKYESGGHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +++ R HTS +++ V P + IEIEI D ++DTYR+SGAGGQHVN TDSAVRI Sbjct: 187 VPVTEASGRIHTSSATVAVMP-EVEDIEIEIRPEDLKVDTYRSSGAGGQHVNMTDSAVRI 245 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+V CQ ERSQ KN+A+A L+A+LY LE +K+ + IG G Sbjct: 246 THLPTGIVATCQDERSQIKNRARAMAYLKARLYALEQEKQNAEQ--ASERRGMIGSGDRS 303 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ + LDGDL + + A + ++ Sbjct: 304 ERIRTYNF-PQNRITDHRINLTLYKLDNYLDGDLFEMIDAMILAEQ 348 >gi|218783033|ref|YP_002434351.1| peptide chain release factor 1 [Desulfatibacillum alkenivorans AK-01] gi|226739100|sp|B8FEA2|RF1_DESAA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|218764417|gb|ACL06883.1| peptide chain release factor 1 [Desulfatibacillum alkenivorans AK-01] Length = 355 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 114/345 (33%), Positives = 174/345 (50%), Gaps = 11/345 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + QR + + DP + + + +RE L + +E + L Sbjct: 1 MLDRLEGVEQRFLEVESLLSDPKIVGDQKVYQKYVREHADLSKVVEAYREYKQVLEGLEE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLE---VEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 EL + D + + K + + + L D + LE+ AG GG Sbjct: 61 SKELLKDPDPDIKDLAKEEIDRLDKEQVRLEDELKILLLPKDPNDDKNVILEIRAGTGGD 120 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMY+R+AE R +K E L H GIK +I G Y K E G H Sbjct: 121 EAGLFAADLFRMYSRYAETRGWKVETLSEHLTGVGGIKEIAAMITGQGVYSAFKFESGTH 180 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ ++ R HTS ++ V P + ++I+I S+ R+D YR+ GAGGQHVNTTDS Sbjct: 181 RVQRVPVTEAQGRIHTSACTVAVLP-EAEEVDIQIDPSEIRVDVYRSQGAGGQHVNTTDS 239 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+TH+PTGVVV CQ E+SQHKNKA+A +LRA+L + +Q++ A+I K+++G Sbjct: 240 AVRLTHLPTGVVVTCQDEKSQHKNKAKAMKVLRARLLDHAVQEQN--ASISAERKSQVGS 297 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G +IR+Y P V D R + ++ G + + + A Sbjct: 298 GDRSERIRTYNY-PQGRVTDHRIGLTLYKLESIMAGQISEIVDAL 341 >gi|253681032|ref|ZP_04861835.1| peptide chain release factor 1 [Clostridium botulinum D str. 1873] gi|253562881|gb|EES92327.1| peptide chain release factor 1 [Clostridium botulinum D str. 1873] Length = 357 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 118/351 (33%), Positives = 195/351 (55%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D D + L+ K DP + N E + L +E L+ ++ +E ++ + Sbjct: 1 MLDKLDFTENKYEELSIKISDPSVMANQNEWRKLCKEHAELETIVTKYREYKNNKEELES 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 EL EE+D + + + ++ ++ + + L D + ++E+ AGAGG Sbjct: 61 NKELLSEENDRDMKEMIQEEIKTLEENIVRDEEELKILLLPKDPNDDKNVFIEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR+AE+ +KTE + ++ + G K +++G +AY +K E GV Sbjct: 121 DEAALFAANLFRMYTRYAERHGWKTELMSTNETDIGGFKEVVFMLRGDSAYSKMKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S+ R HTS +++ V P D ++I+I +D R+D +RASG GGQ VNTTD Sbjct: 181 HRVQRVPDTESSGRIHTSTATVAVLP-EVDDVDIQIDPNDIRVDVFRASGHGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+VV CQ E+SQ KNK +A +L+A+LYE +R A+I K+++G Sbjct: 240 SAVRMTHIPTGIVVSCQDEKSQLKNKEKALKVLKARLYEKAEAER--AASISADRKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V + R + LDGD+++ + A + ++ Sbjct: 298 TGDRSERIRTYNY-PQGRVTEHRIGVTLYKLEAFLDGDMEEIIDALITAEQ 347 >gi|46396627|sp|Q89AC4|RF2_BUCBP RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 366 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 156/350 (44%), Positives = 227/350 (64%), Gaps = 1/350 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L Q+N L D+D RL +N + + P W++ K + +E+ L + ++ I +I Sbjct: 15 LVSQINKLKRRLDYDIKKNRLLEINMELKLPETWKHPSLIKKINKEKNQLISVVTQITKI 74 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + + +L L + SIL + I+ + + S+ G+ D Y+++ Sbjct: 75 DNDVQELIDILNLENSNNINSILDNVLYEFKNIEKSIHELEKCSMFLGKYDYLSCYVDIQ 134 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +G+GG E+QDWA+MLLRMY RWAE +KFK + +E GE GIKSAT+ + G A+GW + Sbjct: 135 SGSGGVEAQDWASMLLRMYVRWAESKKFKIDIIEQTYGEVVGIKSATIEVLGKYAFGWFR 194 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR SP++++ RRHTSFSS++VYP++DD+I ++I+ D +ID YRASGAGGQH Sbjct: 195 TETGIHRLVRKSPFNAHHRRHTSFSSVYVYPILDDAINVDINTRDLKIDVYRASGAGGQH 254 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRI H+PTG+VVQCQ +RSQHKNK QA L+AKLYE + +++ I E++ Sbjct: 255 VNKTESAVRIRHLPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYEQLINEKKCQQKILENN 314 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 K IGWG QIRSY L +KDLRT +E + VLDG LD F++ +L Sbjct: 315 KLNIGWGHQIRSYTLD-NSRIKDLRTGVESKNIQSVLDGGLDLFVECSLR 363 >gi|26987469|ref|NP_742894.1| peptide chain release factor 1 [Pseudomonas putida KT2440] gi|32171521|sp|Q88PW5|RF1_PSEPK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|24982133|gb|AAN66358.1|AE016264_2 peptide chain release factor 1 [Pseudomonas putida KT2440] Length = 360 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 120/346 (34%), Positives = 175/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R L D + + + RE ++ + KE + D L Sbjct: 9 LEILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWRKVQDDLEGAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLE---VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + + Q L D + +LE+ AG GG E+ Sbjct: 69 LKDSDPDLREMAVEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AEKR ++ E L ++GE G K ++G N YG LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI+ +D R+DTYRASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ+ERSQHKN+A+A + L AKL + +Q + K +G G Sbjct: 249 THLPTGIVVECQEERSQHKNRARAMSWLSAKLND--MQTSAAQNALASERKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ S D+L G +D ++ LA + Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYSLDDILSGGVDAVIEPLLAEYQ 351 >gi|17987337|ref|NP_539971.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str. 16M] gi|62289859|ref|YP_221652.1| peptide chain release factor 2 [Brucella abortus bv. 1 str. 9-941] gi|82699784|ref|YP_414358.1| peptide chain release factor 2 [Brucella melitensis biovar Abortus 2308] gi|189024100|ref|YP_001934868.1| peptide chain release factor 2 [Brucella abortus S19] gi|225627404|ref|ZP_03785441.1| peptide chain release factor 2 [Brucella ceti str. Cudo] gi|225852429|ref|YP_002732662.1| peptide chain release factor 2 [Brucella melitensis ATCC 23457] gi|237815350|ref|ZP_04594348.1| peptide chain release factor 2 [Brucella abortus str. 2308 A] gi|254689165|ref|ZP_05152419.1| peptide chain release factor 2 [Brucella abortus bv. 6 str. 870] gi|254693648|ref|ZP_05155476.1| peptide chain release factor 2 [Brucella abortus bv. 3 str. Tulya] gi|254697300|ref|ZP_05159128.1| peptide chain release factor 2 [Brucella abortus bv. 2 str. 86/8/59] gi|254706874|ref|ZP_05168702.1| peptide chain release factor 2 [Brucella pinnipedialis M163/99/10] gi|254710017|ref|ZP_05171828.1| peptide chain release factor 2 [Brucella pinnipedialis B2/94] gi|254714019|ref|ZP_05175830.1| peptide chain release factor 2 [Brucella ceti M644/93/1] gi|254716923|ref|ZP_05178734.1| peptide chain release factor 2 [Brucella ceti M13/05/1] gi|254719019|ref|ZP_05180830.1| peptide chain release factor 2 [Brucella sp. 83/13] gi|254730198|ref|ZP_05188776.1| peptide chain release factor 2 [Brucella abortus bv. 4 str. 292] gi|256031512|ref|ZP_05445126.1| peptide chain release factor 2 [Brucella pinnipedialis M292/94/1] gi|256044588|ref|ZP_05447492.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str. Rev.1] gi|256061021|ref|ZP_05451178.1| peptide chain release factor 2 [Brucella neotomae 5K33] gi|256113462|ref|ZP_05454303.1| peptide chain release factor 2 [Brucella melitensis bv. 3 str. Ether] gi|256159637|ref|ZP_05457399.1| peptide chain release factor 2 [Brucella ceti M490/95/1] gi|256254917|ref|ZP_05460453.1| peptide chain release factor 2 [Brucella ceti B1/94] gi|256257415|ref|ZP_05462951.1| peptide chain release factor 2 [Brucella abortus bv. 9 str. C68] gi|256264074|ref|ZP_05466606.1| peptide chain release factor 2 [Brucella melitensis bv. 2 str. 63/9] gi|260168645|ref|ZP_05755456.1| peptide chain release factor 2 [Brucella sp. F5/99] gi|260545394|ref|ZP_05821135.1| peptide chain release factor 2 [Brucella abortus NCTC 8038] gi|260563940|ref|ZP_05834426.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str. 16M] gi|260754664|ref|ZP_05867012.1| peptide chain release factor 2 [Brucella abortus bv. 6 str. 870] gi|260757887|ref|ZP_05870235.1| peptide chain release factor 2 [Brucella abortus bv. 4 str. 292] gi|260761710|ref|ZP_05874053.1| peptide chain release factor 2 [Brucella abortus bv. 2 str. 86/8/59] gi|260883690|ref|ZP_05895304.1| peptide chain release factor 2 [Brucella abortus bv. 9 str. C68] gi|261213915|ref|ZP_05928196.1| peptide chain release factor 2 [Brucella abortus bv. 3 str. Tulya] gi|261218729|ref|ZP_05933010.1| peptide chain release factor 2 [Brucella ceti M13/05/1] gi|261222099|ref|ZP_05936380.1| peptide chain release factor 2 [Brucella ceti B1/94] gi|261314339|ref|ZP_05953536.1| peptide chain release factor 2 [Brucella pinnipedialis M163/99/10] gi|261317565|ref|ZP_05956762.1| peptide chain release factor 2 [Brucella pinnipedialis B2/94] gi|261321773|ref|ZP_05960970.1| peptide chain release factor 2 [Brucella ceti M644/93/1] gi|261325021|ref|ZP_05964218.1| peptide chain release factor 2 [Brucella neotomae 5K33] gi|261758119|ref|ZP_06001828.1| peptide chain release factor 2 [Brucella sp. F5/99] gi|265984009|ref|ZP_06096744.1| peptide chain release factor 2 [Brucella sp. 83/13] gi|265988599|ref|ZP_06101156.1| peptide chain release factor 2 [Brucella pinnipedialis M292/94/1] gi|265991013|ref|ZP_06103570.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str. Rev.1] gi|265994850|ref|ZP_06107407.1| peptide chain release factor 2 [Brucella melitensis bv. 3 str. Ether] gi|265998064|ref|ZP_06110621.1| peptide chain release factor 2 [Brucella ceti M490/95/1] gi|294852271|ref|ZP_06792944.1| peptide chain release factor 2 [Brucella sp. NVSL 07-0026] gi|297248263|ref|ZP_06931981.1| peptide chain release factor 2 [Brucella abortus bv. 5 str. B3196] gi|306840093|ref|ZP_07472879.1| peptide chain release factor 2 [Brucella sp. NF 2653] gi|17983020|gb|AAL52235.1| bacterial peptide chain release factor 2 (rf-2) [Brucella melitensis bv. 1 str. 16M] gi|62195991|gb|AAX74291.1| peptide release factor 2 [Brucella abortus bv. 1 str. 9-941] gi|82615885|emb|CAJ10889.1| Class I peptide chain release factor domain:Peptide chain release factor 2:PCRF domain [Brucella melitensis biovar Abortus 2308] gi|189019672|gb|ACD72394.1| Peptide chain release factor 2 [Brucella abortus S19] gi|225617409|gb|EEH14454.1| peptide chain release factor 2 [Brucella ceti str. Cudo] gi|225640794|gb|ACO00708.1| peptide chain release factor 2 [Brucella melitensis ATCC 23457] gi|237790187|gb|EEP64397.1| peptide chain release factor 2 [Brucella abortus str. 2308 A] gi|260096801|gb|EEW80676.1| peptide chain release factor 2 [Brucella abortus NCTC 8038] gi|260153956|gb|EEW89048.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str. 16M] gi|260668205|gb|EEX55145.1| peptide chain release factor 2 [Brucella abortus bv. 4 str. 292] gi|260672142|gb|EEX58963.1| peptide chain release factor 2 [Brucella abortus bv. 2 str. 86/8/59] gi|260674772|gb|EEX61593.1| peptide chain release factor 2 [Brucella abortus bv. 6 str. 870] gi|260873218|gb|EEX80287.1| peptide chain release factor 2 [Brucella abortus bv. 9 str. C68] gi|260915522|gb|EEX82383.1| peptide chain release factor 2 [Brucella abortus bv. 3 str. Tulya] gi|260920683|gb|EEX87336.1| peptide chain release factor 2 [Brucella ceti B1/94] gi|260923818|gb|EEX90386.1| peptide chain release factor 2 [Brucella ceti M13/05/1] gi|261294463|gb|EEX97959.1| peptide chain release factor 2 [Brucella ceti M644/93/1] gi|261296788|gb|EEY00285.1| peptide chain release factor 2 [Brucella pinnipedialis B2/94] gi|261301001|gb|EEY04498.1| peptide chain release factor 2 [Brucella neotomae 5K33] gi|261303365|gb|EEY06862.1| peptide chain release factor 2 [Brucella pinnipedialis M163/99/10] gi|261738103|gb|EEY26099.1| peptide chain release factor 2 [Brucella sp. F5/99] gi|262552532|gb|EEZ08522.1| peptide chain release factor 2 [Brucella ceti M490/95/1] gi|262765963|gb|EEZ11752.1| peptide chain release factor 2 [Brucella melitensis bv. 3 str. Ether] gi|263001797|gb|EEZ14372.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str. Rev.1] gi|263094278|gb|EEZ18139.1| peptide chain release factor 2 [Brucella melitensis bv. 2 str. 63/9] gi|264660796|gb|EEZ31057.1| peptide chain release factor 2 [Brucella pinnipedialis M292/94/1] gi|264662601|gb|EEZ32862.1| peptide chain release factor 2 [Brucella sp. 83/13] gi|294820860|gb|EFG37859.1| peptide chain release factor 2 [Brucella sp. NVSL 07-0026] gi|297175432|gb|EFH34779.1| peptide chain release factor 2 [Brucella abortus bv. 5 str. B3196] gi|306404821|gb|EFM61114.1| peptide chain release factor 2 [Brucella sp. NF 2653] gi|326408941|gb|ADZ66006.1| Peptide chain release factor 2 [Brucella melitensis M28] gi|326538654|gb|ADZ86869.1| peptide chain release factor 2 [Brucella melitensis M5-90] Length = 321 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 203/309 (65%), Positives = 258/309 (83%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ L+++I+ I ++ L D++ L+ + EE D SI+++ ++ +K E++ +Q + Sbjct: 1 MRERQQLEDSINGINHLKQTLNDSVELIAMGEEEGDKSIVEDAEKTIRDLKDEIDRRQID 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LLSGEAD+ND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+ K E +E+H+GEEAGI Sbjct: 61 MLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+L+KG N+YG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+IE++++E Sbjct: 121 KSATILVKGHNSYGMLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE + ++KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG + Sbjct: 241 EEELKKREEATDAANATKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTP 300 Query: 346 FMKATLAIK 354 FM+A LA + Sbjct: 301 FMEAALAHR 309 >gi|317507095|ref|ZP_07964856.1| peptide chain release factor 2 protein [Segniliparus rugosus ATCC BAA-974] gi|316254589|gb|EFV13898.1| peptide chain release factor 2 protein [Segniliparus rugosus ATCC BAA-974] Length = 372 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 153/356 (42%), Positives = 216/356 (60%), Gaps = 4/356 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS L+ + D ++ L ++ DP LW++ + + + + + Sbjct: 12 LSATLSTVESALDLSKLEAEIADLESQAADPSLWEDQDRGQEVTSGLARRQATLRAVTAL 71 Query: 63 QDRLCDNLILLELALEE---DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + RL D +L ELA ++ + L E + ++ ++E + +LL+GE D +A + Sbjct: 72 RSRLDDLHVLYELAEDDSGAEGQEALAEADAERKALREDIETLEVRTLLNGEYDEREALV 131 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + +GAGG ++ DWA ML+RMY RWAE+ K E +I EEAGIKSAT +K AYG Sbjct: 132 TIRSGAGGIDAADWAQMLMRMYIRWAERHKHPVEIYDISYAEEAGIKSATFAVKSAYAYG 191 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L EQG HRLVRISP+D+ RR TSF+ + V PVV + IEI ES+ R+D YR+SG G Sbjct: 192 TLSVEQGTHRLVRISPFDNQGRRQTSFADVEVLPVVGTTDHIEIPESEVRVDVYRSSGPG 251 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVR+TH+PTGVVV CQ E+SQ +NK A +L+AKL E Q+ +E N Sbjct: 252 GQSVNTTDSAVRLTHLPTGVVVTCQNEKSQLQNKLSAMRVLQAKLLERRRQEEQEQLNAL 311 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + WG Q+RSYVL PYQMVKDLRT E +P+ VLDGD+D F+++ + ++ Sbjct: 312 KGDGGS-SWGTQMRSYVLAPYQMVKDLRTEYEVGNPTTVLDGDIDGFLESGIRWRR 366 >gi|225386765|ref|ZP_03756529.1| hypothetical protein CLOSTASPAR_00513 [Clostridium asparagiforme DSM 15981] gi|225047127|gb|EEG57373.1| hypothetical protein CLOSTASPAR_00513 [Clostridium asparagiforme DSM 15981] Length = 358 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 116/351 (33%), Positives = 190/351 (54%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D+ + L DP + Q+ LM+E+ L + K+ + D Sbjct: 1 MFDKLDDILIHYEELMLMLGDPDVTQDTKRFTKLMKEQADLAPIVEAYKQYKQAKQDVED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127 L + EE D + + + L K +E + E D + LE+ AGAGG Sbjct: 61 SLAMLEEESDEEMREMAKEELADAKKRIEDLEHELKILLLPKDPNDDKNIILEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYT +A+ +++K E + +++ G K ++ G AY LK E GV Sbjct: 121 DEAALFAAELYRMYTNYADSQRWKVEIISLNENGIGGFKEVVAMVTGKGAYSKLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + ++++I +DCRID RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVMP-EAEEVDVQIDMNDCRIDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+V+ Q E+SQ +NK +A+ +LR+KL+++EL+KR+ ++ E +++IG Sbjct: 240 SAVRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLFDIELEKRQ--SSEAEERRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++GD+ + + +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLYKIDSIMNGDIQELLDNLIAADQ 347 >gi|189502408|ref|YP_001958125.1| hypothetical protein Aasi_1048 [Candidatus Amoebophilus asiaticus 5a2] gi|189497849|gb|ACE06396.1| hypothetical protein Aasi_1048 [Candidatus Amoebophilus asiaticus 5a2] Length = 332 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 146/330 (44%), Positives = 211/330 (63%), Gaps = 2/330 (0%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 L K+ P W+N +A++++R + + I ++ L + + D Sbjct: 2 LQDQEAKSLAPDFWENTSQAEVILRNLKITKSWIDAFDHVESLLENLEVTQLFYEAGDVD 61 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 Q + +E + +L E D N A +E++ GAGGTESQDWA ML RMY Sbjct: 62 ETE--VEKAYQNLLTGLEALEVRKMLQNEEDENSAIIEINPGAGGTESQDWAEMLTRMYI 119 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 W EK + + L G+ AG+KSATL I G AYG+LK E G+HRLVRISP+D+ +R Sbjct: 120 MWGEKHNYTVKELAYQRGDVAGVKSATLEITGTFAYGYLKSEIGIHRLVRISPFDAAGKR 179 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTSF+SI+VYPVV+++I+I+I+ +D DT+RA GAGGQ+VN ++AVR+ H P+G++V+ Sbjct: 180 HTSFASIYVYPVVENNIQIDINPADITWDTFRAGGAGGQNVNKVETAVRLKHAPSGIIVE 239 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322 CQQERSQ +NK +A +L++KLY+LEL KR ESSK I +G QIR+YVL PY++ Sbjct: 240 CQQERSQAQNKEKALRILKSKLYQLELDKRNAEKEKMESSKKRIDFGSQIRNYVLHPYKL 299 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 VKD RT++E + S VL+G++D+F+KA L Sbjct: 300 VKDNRTDVETSDTSGVLNGNIDEFIKAYLM 329 >gi|299142161|ref|ZP_07035294.1| peptide chain release factor 2, programmed [Prevotella oris C735] gi|298576250|gb|EFI48123.1| peptide chain release factor 2, programmed [Prevotella oris C735] Length = 378 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 129/359 (35%), Positives = 206/359 (57%), Gaps = 12/359 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++ + + L D +T+ P W + A+ MR+ + ++ + Sbjct: 10 ITERTDALHRYLGIDQKKIEFEEEQLRTQAPDFWDDPKRAEAQMRKVKGIEKWLKGYDAC 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + + D+ +E + + VE + +++L E DS DA L+++ Sbjct: 70 RQLTDELQLAFDFYK--DEMVSEEEVDADYAKAVKAVEDLELKNMLRQEEDSMDAVLKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PNAYGWL 181 +GAGGTESQDWA ML+RMY RW+E + + +I DG+EAGIKS T+ I+G AYG+L Sbjct: 128 SGAGGTESQDWAQMLMRMYQRWSESHGYTVKVTDIQDGDEAGIKSVTMTIEGGDYAYGYL 187 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVR+SPY++ +R TSF+S++V P+VDD+IE+ + + DT+R+SGAGGQ Sbjct: 188 KSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVYVDPAKVSWDTFRSSGAGGQ 247 Query: 242 HVNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 +VN +S VR+ + ++++ + R Q KN+A+A +L+++LY+ L+KR+ Sbjct: 248 NVNKVESGVRLRYQYEDPDTGEHEEILIENTETRDQPKNRAKAMLLLKSQLYDRALKKRQ 307 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ K +I WG QIRSYV + VKD RT + + V+DG LD F+KA L Sbjct: 308 AEQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTGFQTSDVDAVMDGKLDGFIKAYLM 365 >gi|296114415|ref|ZP_06833069.1| peptide chain release factor 2 [Gluconacetobacter hansenii ATCC 23769] gi|295979176|gb|EFG85900.1| peptide chain release factor 2 [Gluconacetobacter hansenii ATCC 23769] Length = 322 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 193/309 (62%), Positives = 247/309 (79%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRER L N I +++++ + D + L+ELA E D ++ E L+ + E + ++ E Sbjct: 1 MRERTLLANQIEGVQKLEGDVRDTIELVELAEMEGDGDVVAEGVLALRALAEEAKRRETE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEAD ND YLEV+AGAGGTE+QDWA MLLRMYTRWAE+ +K +E +GE+AG+ Sbjct: 61 SLLSGEADGNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTLMESSEGEQAGL 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ + GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPV+DDSIEI+I+E Sbjct: 121 KSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVIDDSIEIDINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D R+DT+RASGAGGQHVN T+SA+RITHIPTG+VV CQ +RSQH+N+A A ML+A++Y Sbjct: 181 ADLRVDTFRASGAGGQHVNKTESAIRITHIPTGIVVACQTDRSQHRNRATAMAMLKARMY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E ELQ+RE A E++KT+IGWG QIRSYVL PYQ+VKDLRTN+EKT+P VLDGDLDD Sbjct: 241 EQELQRREAAAAQTEAAKTDIGWGHQIRSYVLAPYQLVKDLRTNMEKTNPGAVLDGDLDD 300 Query: 346 FMKATLAIK 354 FM A+LA + Sbjct: 301 FMAASLAAQ 309 >gi|134093473|ref|YP_001098548.1| peptide chain release factor 1 [Herminiimonas arsenicoxydans] Length = 356 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 121/344 (35%), Positives = 178/344 (51%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +RL+ LN N+ + + RE L ++ D + Sbjct: 5 LDQLTERLAELNVLLMQEDATSNMDNYRKMTREHAELGPLVALYGNYTQADNDIKDAQGM 64 Query: 76 ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D +E + R++ Q L D + +LE+ AG GG ES +A Sbjct: 65 LSDPDMKEFAQEEMAAAKTRMEQLELDLQKMLLPKDPNDERNIFLEIRAGTGGDESALFA 124 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE+ +++ E + E G K + I G AY LK E G HR+ R+ Sbjct: 125 GDLLRMYTRFAERNRWQIEMVSESASEVGGYKEVIVRIVGNGAYSKLKFESGGHRVQRVP 184 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ ++ I+ +D RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 185 ATETQGRIHTSACTVAVMPEADEVEDVNINPADLRIDTYRASGAGGQHINKTDSAVRITH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV+CQ +RSQHKNKA A +L A++ +++L RE+ + + K+ IG G + Sbjct: 245 IPTGIVVECQDDRSQHKNKASALKVLAARIKDVQL--REQQSQEAATRKSLIGSGDRSER 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++DGDL + A A + Sbjct: 303 IRTYNF-PQGRMTDHRINLTLYKLDFIMDGDLTELTNALAAEHQ 345 >gi|254230550|ref|ZP_04923918.1| peptide chain release factor 1 [Vibrio sp. Ex25] gi|262394972|ref|YP_003286826.1| peptide chain release factor 1 [Vibrio sp. Ex25] gi|151936922|gb|EDN55812.1| peptide chain release factor 1 [Vibrio sp. Ex25] gi|262338566|gb|ACY52361.1| peptide chain release factor 1 [Vibrio sp. Ex25] Length = 362 Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats. Identities = 116/346 (33%), Positives = 180/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72 + V+R + DP + + + + L RE L+ + Q D + Sbjct: 9 LETLVERYEEVQHLLGDPDVIGDQDKFRALSREYSQLEEVTKCFQAYQQAQEDLVAAEEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 EE +E + I+ + Q L D + +LE+ AGAGG E+ Sbjct: 69 ANEDDEEMREMAQEEIKEAKATIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AEKR ++ E + ++ E G K + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RI Sbjct: 189 VPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG VV+CQ ERSQHKNKA+A +L A++ + E ++R + ++ + +G G Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAE--VSDTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ ++V++GDL + + + Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTIYRLNEVMEGDLQSLIDPVIQEHQ 351 >gi|193222210|emb|CAL60419.2| Peptide chain release factor 1 (RF-1) [Herminiimonas arsenicoxydans] Length = 361 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 121/344 (35%), Positives = 178/344 (51%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +RL+ LN N+ + + RE L ++ D + Sbjct: 10 LDQLTERLAELNVLLMQEDATSNMDNYRKMTREHAELGPLVALYGNYTQADNDIKDAQGM 69 Query: 76 ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D +E + R++ Q L D + +LE+ AG GG ES +A Sbjct: 70 LSDPDMKEFAQEEMAAAKTRMEQLELDLQKMLLPKDPNDERNIFLEIRAGTGGDESALFA 129 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE+ +++ E + E G K + I G AY LK E G HR+ R+ Sbjct: 130 GDLLRMYTRFAERNRWQIEMVSESASEVGGYKEVIVRIVGNGAYSKLKFESGGHRVQRVP 189 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ ++ I+ +D RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 190 ATETQGRIHTSACTVAVMPEADEVEDVNINPADLRIDTYRASGAGGQHINKTDSAVRITH 249 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV+CQ +RSQHKNKA A +L A++ +++L RE+ + + K+ IG G + Sbjct: 250 IPTGIVVECQDDRSQHKNKASALKVLAARIKDVQL--REQQSQEAATRKSLIGSGDRSER 307 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++DGDL + A A + Sbjct: 308 IRTYNF-PQGRMTDHRINLTLYKLDFIMDGDLTELTNALAAEHQ 350 >gi|294142153|ref|YP_003558131.1| peptide chain release factor 1 [Shewanella violacea DSS12] gi|293328622|dbj|BAJ03353.1| peptide chain release factor 1 [Shewanella violacea DSS12] Length = 361 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 115/338 (34%), Positives = 182/338 (53%), Gaps = 9/338 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R + DP + + + L +E L++ ++ K Q D E+ Sbjct: 9 LEGLLERNEEVLALLSDPGVISDQDRFRALSKEYSQLEDVVATFKAFQQATEDLDAAKEM 68 Query: 76 ALEEDDCSILQETSDNLQ---RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E D + I + Q L D N+A++E+ AGAGG E+ Sbjct: 69 LSENDPEIKEMAQEEMKDAKSIIVKLEDELQILLLPKDPNDDNNAFVEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMYTR+ E +++TE + ++GE G K + + G YG LK E G HR+ R Sbjct: 129 FAGDLYRMYTRYFETNRWQTEIMNANEGEHGGFKEVIIKVSGEGVYGRLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V V ++ I+I+ +D ++DT+RASGAGGQHVN TDSA+R+ Sbjct: 189 VPETESQGRVHTSACTVAVLAEVPEAEAIKINPADLKVDTFRASGAGGQHVNKTDSAIRL 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIP+G+VV+CQ +RSQHKN+AQA ++L A++ +E +KR + + +G G Sbjct: 249 THIPSGIVVECQDQRSQHKNRAQAMSVLSARIQAVEDEKRRSAEET--TRRNLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +IR+Y P V D R N+ +DV++G+LD + Sbjct: 307 ERIRTYNY-PQGRVSDHRINLTLYRLNDVMEGELDVLI 343 >gi|183598963|ref|ZP_02960456.1| hypothetical protein PROSTU_02407 [Providencia stuartii ATCC 25827] gi|188021179|gb|EDU59219.1| hypothetical protein PROSTU_02407 [Providencia stuartii ATCC 25827] Length = 360 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 115/340 (33%), Positives = 177/340 (52%), Gaps = 7/340 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L +E L + + D + Sbjct: 9 LEALQERYEEIQAHLADAGVIADQGRFRALSKEYAQLTDVAKCFTAWRTVQEDIETAEMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE R + + Q L D + +LE+ AGAGG E+ +A Sbjct: 69 LDDPEMKEMAQEELKEAKARNEELEQQLQLLLLPKDPDDEYNCFLEIRAGAGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE +++ E + DGE G K I G + YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEANRWRVELMSTSDGEHGGFKEVIAKISGESVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P + ++ EI+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAILPELPEAELPEINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV+CQ ERSQHKNKA+A ++L A++ + E+ KR+ A + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLGARIRQAEMDKRQ--AAEASERRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IR+Y P V D R N+ +V++G LD ++ + Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDALIQPII 345 >gi|168185914|ref|ZP_02620549.1| peptide chain release factor 1 [Clostridium botulinum C str. Eklund] gi|169296113|gb|EDS78246.1| peptide chain release factor 1 [Clostridium botulinum C str. Eklund] Length = 357 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 117/351 (33%), Positives = 193/351 (54%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D D + L+ K DP + N E + L +E L+ ++ +E + + Sbjct: 1 MLDKLDFTENKYEELSIKISDPSVMANQNEWRKLCKEHSELETIVTKYREYKGNKEELEA 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 E+ EE D + + + ++ ++ + + L D + ++E+ AGAGG Sbjct: 61 NKEMLSEETDKDMKEMIQEEIKTLEENIVTDEEELKILLLPKDPNDDKNVFIEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR+AE+ +KTE + ++ + G K +++G +AY +K E GV Sbjct: 121 DEAALFAANLFRMYTRYAERHGWKTELMSANETDIGGFKEVVFMLRGDSAYSKMKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S+ R HTS +++ V P D ++I+I +D R+D +RASG GGQ VNTTD Sbjct: 181 HRVQRVPDTESSGRIHTSTATVAVLP-EVDDVDIQIDPNDIRVDVFRASGHGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+VV CQ E+SQ KNK +A +L+A+LYE +R A+I K+++G Sbjct: 240 SAVRMTHIPTGIVVSCQDEKSQLKNKEKAMKVLKARLYEKAEAER--SASISADRKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V + R + LDGD+++ + A + ++ Sbjct: 298 TGDRSERIRTYNY-PQGRVTEHRIGLTLYKLEAFLDGDMEEVIDALITAEQ 347 >gi|167745421|ref|ZP_02417548.1| hypothetical protein ANACAC_00112 [Anaerostipes caccae DSM 14662] gi|167655142|gb|EDR99271.1| hypothetical protein ANACAC_00112 [Anaerostipes caccae DSM 14662] Length = 357 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 123/351 (35%), Positives = 183/351 (52%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ V+R+ + + DP + + + LM+E+ L + KE + Sbjct: 1 MFDKLESLVERMDTVLQQLNDPDVAGDQNRFRDLMKEQSDLAPIVEKYKEYVQEKQNIEE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 LEL EE D + + + L K VE + + D + +E+ AGAGG Sbjct: 61 SLELLEEESDEEMKELAKEELSESKANVERLEEELKILLIPKDPNDDKNIIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY +AE R++K E L ++ G K +I G AY K E GV Sbjct: 121 DEAALFAADVARMYRSYAEGRRWKVETLSFNESGIGGFKELVFMISGQGAYSRFKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +S R HTS ++ + P V+D +DC+ D +RASG GGQ VNTTD Sbjct: 181 HRVQRIPATESGGRIHTSTITVAIMPEVEDVEVEV-DLNDCKFDVFRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+VV CQ E+SQ KNK +A +LR++LYELE QK E K+++G Sbjct: 240 SAVRLTHLPTGIVVSCQDEKSQLKNKDKALKVLRSRLYELEQQK--AHDAEAEKRKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + V++GDLD+ + + A + Sbjct: 298 TGDRSEKIRTYNY-PQGRVTDHRIKLTLHKLDSVMNGDLDELIDSLTAADQ 347 >gi|257126615|ref|YP_003164729.1| peptide chain release factor 1 [Leptotrichia buccalis C-1013-b] gi|257050554|gb|ACV39738.1| peptide chain release factor 1 [Leptotrichia buccalis C-1013-b] Length = 360 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 125/351 (35%), Positives = 187/351 (53%), Gaps = 11/351 (3%) Query: 13 LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL- 70 +F D+ V + L DP + + + + +D + ++R + Sbjct: 1 MFQKLDDVVLKHKELTELLMDPEVVSDPKKIMEYNKALNSIDEVVQKYTYYKNRKEEMES 60 Query: 71 ---ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L E +L+E + I E + L D + +E+ AGAGG Sbjct: 61 LKEDLKTEKDAEMKEMMLEEIHSIEEEIPNLEEELKILLLPKDPNDDKNVIMEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RM+TR+AE+ ++KTE ++ + G+K T LIKG AY LK E GV Sbjct: 121 DEAALFAADIFRMFTRYAERNRWKTEIIDKSEIGVGGLKEVTFLIKGHGAYSRLKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S+ R HTS ++ V P +DD E+EI+ SD +IDTYR+SGAGGQHVNTTD Sbjct: 181 HRVQRVPATESSGRVHTSTITVAVLPEIDDVSEVEINPSDLKIDTYRSSGAGGQHVNTTD 240 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VV Q RSQ KN+ A +L +KLYE+E +K+ ++++G Sbjct: 241 SAVRITHLPTGLVVTSQDGRSQIKNREAAMKVLASKLYEMEYEKQRSAVE--SERRSQVG 298 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + VLDGDLD+ + A +A ++ Sbjct: 299 SGDRSEKIRTYNF-PQGRVTDHRIKLTLHRLEGVLDGDLDEMIDALIAYEQ 348 >gi|254520297|ref|ZP_05132353.1| peptide chain release factor 1 [Clostridium sp. 7_2_43FAA] gi|226914046|gb|EEH99247.1| peptide chain release factor 1 [Clostridium sp. 7_2_43FAA] Length = 361 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 125/344 (36%), Positives = 186/344 (54%), Gaps = 11/344 (3%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + L+ K DP + N E + L +E L+ ++ KE + + D E+ E Sbjct: 9 IENKYDELSVKISDPSIMANQNEWRKLCKEHADLEVIVTAYKEYRTVIDDLAANKEMLAE 68 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 E D + + S+ + + + L D + ++E+ GAGG E+ +A Sbjct: 69 ESDREMREMLSEEISDLTAREGELEKHIQILLLPKDPNDDKNVFVEIRGGAGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMYTR+AE +++ E + ++ + G K +IKG AY LK E GVHR+ R+ Sbjct: 129 ANLFRMYTRYAETQRWSVELMSANETDIGGFKEVVFMIKGSGAYSKLKYESGVHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S+ R HTS +++ V P D +EIEI+E D RID YR+SG GGQ VNTTDSAVRITH Sbjct: 189 DTESSGRIHTSTATVAVLP-EVDDVEIEINEKDLRIDVYRSSGNGGQCVNTTDSAVRITH 247 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTGVVV CQ E+SQ KNK +A +LR++LYE +R A I E K+++G G + Sbjct: 248 IPTGVVVACQDEKSQLKNKEKAMKVLRSRLYEAAEAERN--AGIAEDRKSQVGSGDRSER 305 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R + L+GD+++ + A + + Sbjct: 306 IRTYNY-PQGRVTDHRIGLTLYKLESYLNGDIEEVINALITADQ 348 >gi|66044202|ref|YP_234043.1| peptide chain release factor 1 [Pseudomonas syringae pv. syringae B728a] gi|75503325|sp|Q4ZXW7|RF1_PSEU2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|63254909|gb|AAY36005.1| Peptide chain release factor 1 [Pseudomonas syringae pv. syringae B728a] gi|330972814|gb|EGH72880.1| peptide chain release factor 1 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 360 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 116/346 (33%), Positives = 174/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + RE ++ ++ ++ D L Sbjct: 9 LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYAQLLRVQGDLEGAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + + Q L D + +LE+ AG GG E+ Sbjct: 69 LKDSDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AE+R ++ E L ++GE G K ++G + YG LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI+ +D R+DTYR+SGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + Q I K +G G Sbjct: 249 THLPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAANAIASERKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ S +VL G +D ++ LA + Sbjct: 307 ERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQ 351 >gi|330873307|gb|EGH07456.1| peptide chain release factor 1 [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 360 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 116/346 (33%), Positives = 174/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + RE ++ ++ ++ D L Sbjct: 9 LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYTQLARVQGDLEGAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + + Q L D + +LE+ AG GG E+ Sbjct: 69 LKDSDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AE+R ++ E L ++GE G K ++G + YG LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI+ +D R+DTYR+SGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + Q I K +G G Sbjct: 249 THLPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAANAIASERKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ S +VL G +D ++ LA + Sbjct: 307 ERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQ 351 >gi|307131078|ref|YP_003883094.1| peptide chain release factor RF-1 [Dickeya dadantii 3937] gi|306528607|gb|ADM98537.1| peptide chain release factor RF-1 [Dickeya dadantii 3937] Length = 361 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 115/337 (34%), Positives = 175/337 (51%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + +P + ++ + L RE L + + Q D + Sbjct: 9 LEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQRWQQTQDDLATAELM 68 Query: 76 ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + E + + Q L D +LE+ AG GG E+ +A Sbjct: 69 LDDPEMRDLAQDELKTAKAASEELEQQLQVLLLPKDPDDERGCFLEIRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R++K E + DGE G K + G AYG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESRRWKVEIMSASDGEHGGYKEMIAKVAGDGAYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P V ++ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPEVPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLAARIRAAEMQKRQQE--EASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 IR+Y P V D R N+ + ++G LD ++ Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLDMLIQ 342 >gi|224025165|ref|ZP_03643531.1| hypothetical protein BACCOPRO_01899 [Bacteroides coprophilus DSM 18228] gi|224018401|gb|EEF76399.1| hypothetical protein BACCOPRO_01899 [Bacteroides coprophilus DSM 18228] Length = 371 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 137/358 (38%), Positives = 207/358 (57%), Gaps = 11/358 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L D DN ++ +T+ P W + +A+ M++ + L N I E+ Sbjct: 10 VKERTEALHRYLDIDNKKVQVEEEQLRTQAPGFWDDAKKAEAQMKKVKTLQNWIEGYNEV 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + L +D+ E D + +E + +++L EAD D L+++ Sbjct: 70 KTLADELE--LSFDFYKDELVTEAEVDDAYNKAMQAIEELELKNMLRSEADQMDCVLKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDWA+ML+RMY RWAE +K + +G+EAGIK+ T+ I+G AYG+LK Sbjct: 128 SGAGGTESQDWASMLMRMYMRWAESNGYKLSVANLQEGDEAGIKTVTMNIEGSYAYGYLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVR+SPY++ +R TSF+S++V P+VDDSIE+ + + DT+R+ GAGGQ+ Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVTVEPARLSWDTFRSGGAGGQN 247 Query: 243 VNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 VN +S VR+ + ++++ + R Q KNK A LR+ LY+ ELQ R E Sbjct: 248 VNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNKENAMRQLRSILYDKELQHRME 307 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ K +I WG QIRSYV + VKD RTN + + + V+DG +D F+KA L Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGKIDGFIKAYLM 364 >gi|306843816|ref|ZP_07476414.1| peptide chain release factor 2 [Brucella sp. BO1] gi|306275894|gb|EFM57610.1| peptide chain release factor 2 [Brucella sp. BO1] Length = 321 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 204/309 (66%), Positives = 258/309 (83%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ L+++I+ I ++ L DN+ L+ + EE D SI+++ ++ +K E++ +Q + Sbjct: 1 MRERQQLEDSINGINYLKQTLNDNVELIAMGEEEGDKSIVEDAEKTIRDLKDEIDRRQID 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LLSGEAD+ND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+ K E +E+H+GEEAGI Sbjct: 61 MLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+L+KG N+YG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+IE++++E Sbjct: 121 KSATILVKGHNSYGMLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE + ++KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG + Sbjct: 241 EEELKKREEATDAANATKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTP 300 Query: 346 FMKATLAIK 354 FM+A LA + Sbjct: 301 FMEAALAHR 309 >gi|291527966|emb|CBK93552.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium rectale M104/1] Length = 358 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 114/351 (32%), Positives = 182/351 (51%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ + L +P + + K LM+E+ L + K+ ++ + Sbjct: 1 MFDKLEDLIHHYEELMNLLSEPDVANDANRFKKLMKEQSDLAPIVETYKKYKECKQNIED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L + EE D + + + L+ K + + + L D + +E+ AGAGG Sbjct: 61 SLAILDEESDEEMRELAKEELKDSKEQVEELEKKLKILLLPKDPNDDKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY +AE R +K E L+ + G+KS ++KG AY LK E GV Sbjct: 121 EEAALFAAEIYRMYVHYAENRGWKVETLDADETGIGGMKSVEFMVKGSGAYSILKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R TS S+ V P +D + ID RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESQGRIQTSTCSVAVMPEAEDVDVKIDDKDIR-IDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH P+G+V+ Q E+SQ +NK +A+ +LR KLY++ELQK+++ E +++IG Sbjct: 240 SAVRLTHYPSGIVIYSQTEKSQIQNKEKAFALLRTKLYDMELQKKQD--AEAEERRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R N+ +L+GD+ + + A +A + Sbjct: 298 TGDRAEKIRTYNF-PQGRVTDHRINLTLYKLDKILNGDIQEIIDACIAADQ 347 >gi|225568858|ref|ZP_03777883.1| hypothetical protein CLOHYLEM_04937 [Clostridium hylemonae DSM 15053] gi|225162357|gb|EEG74976.1| hypothetical protein CLOHYLEM_04937 [Clostridium hylemonae DSM 15053] Length = 312 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 155/308 (50%), Positives = 214/308 (69%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+E + L + I + D D +L+E++ EE+D S ++E +Q + + E + Sbjct: 1 MKELKDLQELVKTIHSLYDGYEDINLLIEMSYEENDASAVKEMEAEIQSFEEQFEALRIR 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGE D+ +A + +HAGAGGTES DWA ML RMY+R+AE++ + E L+ DG+ GI Sbjct: 61 TLLSGEYDACNAIVTIHAGAGGTESCDWAGMLYRMYSRFAERKGYSMEVLDYLDGDITGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ T +KG NAYG+LK E+GVHRLVRISP+++ +R TSF+S V P ++D I+IEI++ Sbjct: 121 KTVTFEVKGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFASCDVVPDIEDEIDIEIAD 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 + +IDTYRASGAGGQHVN T SA+RITH+PTG+VVQCQ ERSQH NK +A ML+ KL Sbjct: 181 EELKIDTYRASGAGGQHVNKTSSAIRITHLPTGIVVQCQNERSQHFNKEKAMQMLKVKLQ 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 L+ Q++ E + EIG+G QIRSYV+QPY MVKD RTN E ++ + VLDG +D Sbjct: 241 LLKEQEQAEKVSDIRGEVKEIGFGNQIRSYVMQPYTMVKDHRTNEECSNVTAVLDGGIDM 300 Query: 346 FMKATLAI 353 F+ A L Sbjct: 301 FINAYLKY 308 >gi|288927134|ref|ZP_06421019.1| peptide chain release factor 2, programmed [Prevotella buccae D17] gi|288336096|gb|EFC74492.1| peptide chain release factor 2, programmed [Prevotella buccae D17] Length = 373 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 122/357 (34%), Positives = 206/357 (57%), Gaps = 12/357 (3%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 + L D D +T+ P W++ A+ M++ + ++ + KE++ Sbjct: 12 ERAEALHRYLDIDKKKVEFEEEQLRTQAPDFWEDPTRAQEQMKKVKSIEKWLDGYKEVRQ 71 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 + + + DD +E + + +E + +++L + D +A +++++G Sbjct: 72 YADELQLAFDFF--HDDMVSEEEVDADYAKAIKAIEALELKNMLRQKEDPMEAVIKINSG 129 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWLKG 183 AGGTESQDWA+ML+RMY RW E ++ + +G+EAGIKS T+ ++ G AYG+LK Sbjct: 130 AGGTESQDWASMLMRMYMRWCEAHGYRCTVSNLQEGDEAGIKSVTMEVEGGEYAYGYLKS 189 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR+SP+++ +R TSF+S++V P+VDD+IE+ + + DT+R+ GAGGQ+V Sbjct: 190 ENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDTIEVFVDPARLSWDTFRSGGAGGQNV 249 Query: 244 NTTDSAVRITH--------IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 N +S VR+ + ++++ + R Q KN+A+A +L+++LY+ ++KR E Sbjct: 250 NKVESGVRLRYWYQDPDTGEEEEILIENTETRDQPKNRAKAMLLLKSQLYDRAMKKRLEA 309 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ K +I WG QIRSYV + VKD RTN + V+DG +D+F+KA L Sbjct: 310 QAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTADVDGVMDGKIDEFIKAYLM 365 >gi|315924395|ref|ZP_07920617.1| peptide chain release factor RF1 [Pseudoramibacter alactolyticus ATCC 23263] gi|315622274|gb|EFV02233.1| peptide chain release factor RF1 [Pseudoramibacter alactolyticus ATCC 23263] Length = 364 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 121/353 (34%), Positives = 194/353 (54%), Gaps = 13/353 (3%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLC 67 + + D ++ LN + DP + + + + LM+E H++ I K + + Sbjct: 8 KMLEKLDFLEEKYQKLNQEISDPAVIADQAKWQDLMKEHAHMEPIIQKYKAYREADQAIA 67 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKL--EVEYKQFESLLSGEADSNDAYLEVHAGA 125 D+ +L + + + E Q +L E + L D + +E+ AGA Sbjct: 68 DSKEMLADKSIDPEFKAMCEDELAEQTAQLATLEEELKILLLPKDPNDERNVIVEIRAGA 127 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A L RMY+R+AE++ +K E L + + GIK I+G AY LK E Sbjct: 128 GGDEAALFAGDLFRMYSRYAERQSWKIEILSSNILDLGGIKEINFAIQGQGAYSRLKYES 187 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ +S R HTS +++ V P D +E++++ +D R+D YR+SG GGQ VNT Sbjct: 188 GVHRVQRVPETESGGRIHTSTATVAVLP-EADDVEVDLNPNDIRVDVYRSSGNGGQCVNT 246 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVR+THIP+G+VV CQ E+SQ KNKA+A +L+A+LY+LE+QK++ + I E K++ Sbjct: 247 TDSAVRLTHIPSGLVVTCQDEKSQIKNKAKAMKVLKARLYDLEMQKQQ--SAISEERKSQ 304 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +G G +IR+Y P + D R LDG++D+ + A + + Sbjct: 305 VGTGDRSERIRTYNF-PQGRITDHRIGQTVHQLEAFLDGEIDEMINALITTDQ 356 >gi|312134918|ref|YP_004002256.1| peptide chain release factor 1 [Caldicellulosiruptor owensensis OL] gi|311774969|gb|ADQ04456.1| peptide chain release factor 1 [Caldicellulosiruptor owensensis OL] Length = 355 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 118/343 (34%), Positives = 176/343 (51%), Gaps = 11/343 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ L K DP + E + LM+E +L + +E + L EL Sbjct: 5 LQVIEEKYLELEKKIADPDIISQTQEWQKLMKEHSNLQPIVEKFREYKRILNTIKEAEEL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 + D + + L K + E + L D + +E+ AGAGG E+ Sbjct: 65 LDTDIDEDFEKLVKEELNWAKEQKEIVERDLKILLLPKDPNDEKNVIMEIRAGAGGEEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AE++ +K E + + + G K +I G AY LK E GVHR+ Sbjct: 125 LFAAELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + IE+EI E D IDT+RA GAGGQHVN T+SAVR Sbjct: 185 RVPVTESGGRIHTSTATVAVLP-EVEDIEVEIREEDLEIDTFRAGGAGGQHVNKTESAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 I H PTG+VV CQ ERSQH N+ +A +LRA+LY+ +++ ++++G G Sbjct: 244 IVHKPTGIVVTCQDERSQHANRDRAMKILRARLYDYYQSLQQKEIE--SQRRSQVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R + VLDG+LD+ + A + Sbjct: 302 SERIRTYNF-PQGRVTDHRIGLTLYKLEQVLDGELDEIIDALI 343 >gi|330899755|gb|EGH31174.1| peptide chain release factor 1 [Pseudomonas syringae pv. japonica str. M301072PT] gi|330941684|gb|EGH44459.1| peptide chain release factor 1 [Pseudomonas syringae pv. pisi str. 1704B] Length = 360 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 116/346 (33%), Positives = 174/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + RE ++ ++ ++ D L Sbjct: 9 LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVTLYAQLLRVQGDLEGAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + + Q L D + +LE+ AG GG E+ Sbjct: 69 LKDSDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AE+R ++ E L ++GE G K ++G + YG LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI+ +D R+DTYR+SGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + Q I K +G G Sbjct: 249 THLPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAANAIASERKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ S +VL G +D ++ LA + Sbjct: 307 ERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQ 351 >gi|164688895|ref|ZP_02212923.1| hypothetical protein CLOBAR_02543 [Clostridium bartlettii DSM 16795] gi|164602099|gb|EDQ95564.1| hypothetical protein CLOBAR_02543 [Clostridium bartlettii DSM 16795] Length = 354 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 124/347 (35%), Positives = 184/347 (53%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + L K D + + + M+E L+ + +E ++ + + E+ Sbjct: 5 LQVLEDKYKELTEKISDIEVINDQKTWQKYMKEHADLEPIVMKYREYKEVVDNIKESKEI 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 EE D + + L ++ VE + L D + +E+ GAGG E+ Sbjct: 65 LEEESDEELRELAKMELSDLESRVEPIEDELKILLLPKDPNDEKNVIVEIRGGAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AE+R++KTE L D G K + +IKG AY LK E GVHR+ Sbjct: 125 LFAGDLFRMYSRYAERRRWKTELLSASDTGVGGYKEVSFMIKGKGAYSRLKYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ V P + +EIEI+ +D RID +RASG GGQ VNTTDSAVR Sbjct: 185 RIPSTESGGRIHTSTATVAVLP-EVEDVEIEINPNDLRIDVFRASGNGGQCVNTTDSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG VV CQ E+SQ KNK +A +L+A+LY+ L E+ +I ++++G G Sbjct: 244 ITHLPTGEVVSCQDEKSQLKNKEKAMKVLKARLYDKALA--EQHDDIAAERRSQVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ LDGDLD+ + A + + Sbjct: 302 SERIRTYNF-PQGRVSDHRINLTLYKLESFLDGDLDEMIDALITEDQ 347 >gi|207721782|ref|YP_002252220.1| peptide chain release factor 1 (rf-1) protein [Ralstonia solanacearum MolK2] gi|206586946|emb|CAQ17530.1| peptide chain release factor 1 (rf-1) protein [Ralstonia solanacearum MolK2] Length = 356 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 119/344 (34%), Positives = 178/344 (51%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +R +N N+ + + L RE L+ ++ + D EL Sbjct: 5 LDQLAERTIEINALLAREDATANLDQYRKLTREHAELEPVVAQYAVWKQAENDVATAQEL 64 Query: 76 ALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + ++ R+ Q L D + +LE+ AG GG ES +A Sbjct: 65 LADPDMKAFAEDELRVARDRMTALEAELQRLLLPKDPNDHRNIFLEIRAGTGGDESALFA 124 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE+++++ E + + G K + G AY LK E G HR+ R+ Sbjct: 125 GDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLKFESGGHRVQRVP 184 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D +I+I+ +D RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 185 ATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDTFRASGAGGQHINKTDSAVRITH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQH+NK +A +L A+L + Q+RE A + K+ IG G + Sbjct: 245 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKD--RQEREAQAKEASARKSLIGSGDRSDR 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ ++DGDLD+ + A + Sbjct: 303 IRTYNF-PQGRVTDHRINLTLYKIDALMDGDLDELLGTLAAEHQ 345 >gi|302872094|ref|YP_003840730.1| peptide chain release factor 1 [Caldicellulosiruptor obsidiansis OB47] gi|302574953|gb|ADL42744.1| peptide chain release factor 1 [Caldicellulosiruptor obsidiansis OB47] Length = 355 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 119/343 (34%), Positives = 177/343 (51%), Gaps = 11/343 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ L K DP + E + LM+E +L + +E + L EL Sbjct: 5 LQVIEEKYLELEKKIADPEIISQTQEWQKLMKEHSNLQPIVEKFREYKKILNTIKEAEEL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 + D + + L R K + E + L D + +E+ AGAGG E+ Sbjct: 65 LDTDLDEDFEKLVKEELNRAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAGGEEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AE++ +K E + + + G K +I G AY LK E GVHR+ Sbjct: 125 LFAAELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + +E+EI E D IDT+RA GAGGQHVN T+SAVR Sbjct: 185 RVPVTESGGRIHTSTATVAVLP-EVEDVEVEIREEDLEIDTFRAGGAGGQHVNKTESAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 I H PTG+VV CQ ERSQH N+ +A +LRA+LY+ +++ ++++G G Sbjct: 244 IVHKPTGIVVTCQDERSQHANRDRAMKILRARLYDYYQSLQQKEIE--SQRRSQVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R + VLDGDLD+ + A + Sbjct: 302 SERIRTYNF-PQGRVTDHRIGLTLYKLEQVLDGDLDEIIDALI 343 >gi|291515566|emb|CBK64776.1| bacterial peptide chain release factor 2 (bRF-2) [Alistipes shahii WAL 8301] Length = 370 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 131/359 (36%), Positives = 209/359 (58%), Gaps = 11/359 (3%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ ++ L D D L KT++P+ W N +A+ +R+ + + Sbjct: 9 EIEQRREALERCLDIDQKRIDLRNEEEKTQEPNFWDNPDKAREQLRKVAGIKAWVEDYDA 68 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ D ++ + + +E + ++E + ++L + D A L++ Sbjct: 69 IRKDAEDLQLMPDFVK--EGVVSEEEMDAHYAATLEKIEKLEMRNMLRRDEDKLGAILDI 126 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGTE+ DWA+ML+RMYTRW E +K + L+ G+E G+KS TL +G AYG+L Sbjct: 127 NAGAGGTEALDWASMLMRMYTRWGEAHGYKVKVLDFQAGDEVGVKSCTLEFEGEYAYGYL 186 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHR+VR+SP+++N++R T+F+S++V P VDD+IEI ++ +D DT+R+SGAGGQ Sbjct: 187 KSENGVHRMVRLSPFNANNKRQTTFASVFVSPAVDDTIEITVNAADIEWDTFRSSGAGGQ 246 Query: 242 HVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 +VN ++AVR+ + +++ + RSQ N+ A +LR+KLY+ EL KR Sbjct: 247 NVNKVETAVRLRYHAKDPDTGEAIEYLIENMETRSQLMNRENAMRILRSKLYQRELDKRM 306 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+SK +I WG QIRSYV + VKD RT ++ ++ V+DGDLD F+KA L Sbjct: 307 ATQQALEASKKKIEWGSQIRSYVFDD-RRVKDHRTGVQTSAVESVMDGDLDAFIKAYLM 364 >gi|158321600|ref|YP_001514107.1| peptide chain release factor 1 [Alkaliphilus oremlandii OhILAs] gi|166977358|sp|A8MJX9|RF1_ALKOO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|158141799|gb|ABW20111.1| peptide chain release factor 1 [Alkaliphilus oremlandii OhILAs] Length = 357 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 117/352 (33%), Positives = 185/352 (52%), Gaps = 13/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---LCD 68 + D ++ L+ K +P + + + K L++E L+ + +E + L D Sbjct: 1 MLDKLAFLEEKYEDLSEKISEPEIINDQPQWKKLVKEHSDLEEIVMKYREYKKTEQGLND 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAG 126 +L +++ + + K+EV + + L D D +E+ AGAG Sbjct: 61 AKEILRDKTADEEFREMAKMEIAELEEKIEVLEGELKILLLPKDPNDDKDVIVEIRAGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L RMYTR+AE +K E + +D G K +IKG AY LK E G Sbjct: 121 GDEAGLFAADLFRMYTRYAENVGWKVEMMSANDTGIGGYKEVIFMIKGHGAYSRLKYESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ RI +S R HTS ++ V P D ++ E+ +D R+D +R+SG GGQ VNTT Sbjct: 181 VHRVQRIPSTESGGRIHTSTITVAVLP-EADDVDFELDMNDIRVDVFRSSGNGGQSVNTT 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVR+THIPTG VV CQ E+SQ KNK +A +LRA+L ++ +Q+++ I + K+++ Sbjct: 240 DSAVRVTHIPTGTVVSCQDEKSQLKNKEKALKILRARLLDVLIQEQQAE--IAQDRKSQV 297 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P + D R N+ L+GD+ + + A + + Sbjct: 298 GTGDRSERIRTYNF-PQGRITDHRINVTLYRLDSFLNGDIQEMIDALITTDQ 348 >gi|86357282|ref|YP_469174.1| peptide chain release factor 2 [Rhizobium etli CFN 42] gi|86281384|gb|ABC90447.1| peptide chain release factor 2 protein [Rhizobium etli CFN 42] Length = 322 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 225/309 (72%), Positives = 268/309 (86%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD+ ++ +++++ +L DN+ L+EL EE D I++E D L+ +K E +Q E Sbjct: 1 MRERQQLDDGVNGVRQLEQQLKDNVELVELGEEEGDEGIVKEAEDALKALKAEAARRQVE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++LSGEADSND YLEVH+GAGGTESQDWANMLLRMYTRWAE+++FK E LE+HDGEEAGI Sbjct: 61 AMLSGEADSNDTYLEVHSGAGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSSIWVYPVVDDSI I+I+E Sbjct: 121 KSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSINIDINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VV CQQERSQHKN+A+AW MLRA++Y Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVACQQERSQHKNRAKAWEMLRARMY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE AN +SKT+IGWG QIRSYVLQPYQ+VKDLRT + T+P DVLDGDL++ Sbjct: 241 EAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVASTAPDDVLDGDLNE 300 Query: 346 FMKATLAIK 354 FM+A LA + Sbjct: 301 FMEAALAHR 309 >gi|134301001|ref|YP_001114497.1| peptide chain release factor 1 [Desulfotomaculum reducens MI-1] gi|134053701|gb|ABO51672.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfotomaculum reducens MI-1] Length = 356 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 107/347 (30%), Positives = 181/347 (52%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L ++ DP + + + + L++ L + ++ + D ++ Sbjct: 5 LQALEDRFEQLESQISDPEVMADRAKWQQLVKSHSDLAEVVDVFRQYKKAKEDLQENKQM 64 Query: 76 ALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ++ + + ++ +I+ + + L D + +E+ G GG E+ Sbjct: 65 LEDKLEPDFREMVELEIEELTSKIEEQENKLKILLLPKDPNDDKNVIMEIRGGTGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AEK+ ++TE ++ ++ + G K T +I+G A+ LK E GVHR+ Sbjct: 125 LFAGDLFRMYSRYAEKKGWRTEIIDANETDLGGFKEVTFVIEGKGAFSTLKFESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + ++I+I+ +D RID + ASG GGQ VNTT SAVR Sbjct: 185 RVPATESGGRIHTSAATVAVLP-EAEEVDIDINANDIRIDLFCASGPGGQCVNTTQSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIPTG VV CQ E+SQHKNK +A +LRA+L + +++ I + K+ +G G Sbjct: 244 ITHIPTGTVVSCQDEKSQHKNKDKAMRVLRARLLDKAQDEQQ--KAIAGARKSMVGSGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + VL GDLD+ + A + + Sbjct: 302 SERIRTYNF-PQNRITDHRIGLTLHRLEYVLQGDLDELIDALITTDQ 347 >gi|330975577|gb|EGH75643.1| peptide chain release factor 1 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 360 Score = 233 bits (593), Expect = 4e-59, Method: Composition-based stats. Identities = 116/346 (33%), Positives = 174/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + RE ++ ++ ++ D L Sbjct: 9 LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVTLYAQLLRVQGDLEGAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + + Q L D + +LE+ AG GG E+ Sbjct: 69 LKDSDPDMREMAVEEVRETRQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AE+R ++ E L ++GE G K ++G + YG LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI+ +D R+DTYR+SGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + Q I K +G G Sbjct: 249 THLPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAANAIASERKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ S +VL G +D ++ LA + Sbjct: 307 ERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQ 351 >gi|320535245|ref|ZP_08035369.1| peptide chain release factor 2 [Treponema phagedenis F0421] gi|320147898|gb|EFW39390.1| peptide chain release factor 2 [Treponema phagedenis F0421] Length = 320 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 160/306 (52%), Positives = 212/306 (69%), Gaps = 1/306 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M E + L + + +E+Q + D L +LA E +D + E Q++ E Sbjct: 1 MSELKVLRSRVEPWRELQTDIEDLQALYDLAEEAEDEQMTDEIDSVYQKLSERFEKLNVL 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LLSGE D+NDA+L +HAGAGGTE+ DWA ML RMY RWAE+ +KTE L++ + + GI Sbjct: 61 HLLSGEVDANDAFLTIHAGAGGTEACDWAQMLTRMYLRWAERNDYKTETLDMLEAD-GGI 119 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KS TL + G A+G+LKGE G+HRLVRISP+DSN+RRHTSF+S++V+PV+DD+IE+EI Sbjct: 120 KSITLKVSGEYAFGFLKGENGIHRLVRISPFDSNARRHTSFTSVYVFPVLDDTIEVEIRP 179 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D R+DTYRA GAGGQHVN TDSAVR+TH+PTG+VV CQ ERSQ N+A A +L+A+LY Sbjct: 180 EDLRVDTYRAGGAGGQHVNKTDSAVRLTHLPTGIVVACQNERSQISNRATAMAILKARLY 239 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E +++E+ + K +I WG QIRSYV QPY MVKD RT E + V+DGD+D Sbjct: 240 EYYREEKEKDNQKFAAEKKDISWGNQIRSYVFQPYTMVKDHRTKYETGNIQAVMDGDIDG 299 Query: 346 FMKATL 351 FM+ L Sbjct: 300 FMEEYL 305 >gi|262166266|ref|ZP_06034003.1| peptide chain release factor 1 [Vibrio mimicus VM223] gi|262025982|gb|EEY44650.1| peptide chain release factor 1 [Vibrio mimicus VM223] Length = 362 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 116/346 (33%), Positives = 181/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72 ++ V+R + DP + + + + L +E L+ + Q D + Sbjct: 9 LESLVERYEEVQHLLGDPAVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + E E I+ + Q L D + +LE+ AGAGG E+ Sbjct: 69 AQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AEK+ ++ E + + E G K + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P V ++ EI SD +IDT+R+SGAGGQHVNTTDSA+RI Sbjct: 189 VPATEAQGRIHTSACTVAVMPEVPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E KR I ++ + +G G Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAE--ISDTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ ++V++GD+ ++ + + Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTVYRLTEVMEGDMQSLIEPVIHEHQ 351 >gi|49531479|emb|CAG69191.1| peptide chain release factor 1 [Acinetobacter sp. ADP1] Length = 376 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 116/339 (34%), Positives = 173/339 (51%), Gaps = 7/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + L RE L+ + + + D + Sbjct: 23 LDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLNEIVDVWSKYRQAEEDIETAESM 82 Query: 76 ALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + QE + I+ + D+N AYLEV AG GG E+ ++ Sbjct: 83 LSDPDFKDMAQEEIKENRALIEQLEGDLNILMIPKDPNDANAAYLEVRAGTGGDEAAIFS 142 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+++AE R ++ E L ++GE G K + G YG LK E G HR+ R+ Sbjct: 143 GDLFRMYSKYAESRGWRIEVLSENEGEHGGYKEVICRVDGDGVYGRLKFESGAHRVQRVP 202 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P VD +EI+ +D RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 203 ATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDTYRASGAGGQHINKTDSAVRITH 262 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTGVVV+CQ+ERSQHKNKA+A +L ++L ++ + E + +G G + Sbjct: 263 VPTGVVVECQEERSQHKNKAKAMALLVSRLENA--KRAAQETATSEMRRDLVGSGDRSER 320 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P + D R N+ +++GDL + + + Sbjct: 321 IRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 358 >gi|168025410|ref|XP_001765227.1| predicted protein [Physcomitrella patens subsp. patens] gi|162683546|gb|EDQ69955.1| predicted protein [Physcomitrella patens subsp. patens] Length = 406 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 126/356 (35%), Positives = 205/356 (57%), Gaps = 3/356 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L R++ + D RL+ L + LW + A+ + + + + +++ Sbjct: 41 ELVRRVGEVLASSDIAEKKARLADLELQASQDTLWDDPDAAQRTLSDLAEVKENLDLLQQ 100 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEADSNDAYL 119 ++++ + +++EL E++ + + ++ + LLSG D A + Sbjct: 101 FENKVEEAQLIIELMGEKEGPDGGLVQEASEIVSWLSNALDKFELAKLLSGPYDRRGARV 160 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + AGAGGT++QDWA MLLRMY+RWAEK+ + + +E GEEAGIKS T + G AYG Sbjct: 161 TISAGAGGTDAQDWAEMLLRMYSRWAEKQGYTVKVMEKSPGEEAGIKSVTFEVDGRFAYG 220 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI-EIEISESDCRIDTYRASGA 238 +L E+G HRLVR SP+++ R TSF+ + V P+ ++ ++EI E++ + T RA G Sbjct: 221 YLASEKGTHRLVRQSPFNAKGLRQTSFAGVEVMPIFEEESLDVEIPETELEVTTTRAGGK 280 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ+VN ++AVRI HIPTG+ V+C +ERSQ NK + +L+AKL + L+++ Sbjct: 281 GGQNVNKVETAVRIVHIPTGIAVRCTEERSQLANKIKGLRLLKAKLLVIALEQKASDLKE 340 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG+QIR+YV PY++VKD+RT E + + V+DG+L F+ A L K Sbjct: 341 IRGDVVKAEWGQQIRNYVFHPYKLVKDVRTATETSDVAGVMDGELGSFITAFLRWK 396 >gi|207744458|ref|YP_002260850.1| peptide chain release factor 1 (rf-1) protein [Ralstonia solanacearum IPO1609] gi|206595864|emb|CAQ62791.1| peptide chain release factor 1 (rf-1) protein [Ralstonia solanacearum IPO1609] Length = 356 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 119/344 (34%), Positives = 178/344 (51%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +R +N N+ + + L RE L+ ++ + D EL Sbjct: 5 LDQLAERTIEINALLAREDATANLDQYRKLTREHAELEPVVTQYAVWKQAENDVATAQEL 64 Query: 76 ALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + ++ R+ Q L D + +LE+ AG GG ES +A Sbjct: 65 LADPDMKAFAEDELRVARDRMTALEAELQRLLLPKDPNDHRNIFLEIRAGTGGDESALFA 124 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE+++++ E + + G K + G AY LK E G HR+ R+ Sbjct: 125 GDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLKFESGGHRVQRVP 184 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D +I+I+ +D RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 185 ATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDTFRASGAGGQHINKTDSAVRITH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQH+NK +A +L A+L + Q+RE A + K+ IG G + Sbjct: 245 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKD--RQEREAQAKEASARKSLIGSGDRSDR 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ ++DGDLD+ + A + Sbjct: 303 IRTYNF-PQGRVTDHRINLTLYKIDALMDGDLDELLGTLAAEHQ 345 >gi|12321742|gb|AAG50902.1|AC069159_3 peptide chain release factor 2, putative [Arabidopsis thaliana] Length = 524 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 156/372 (41%), Positives = 218/372 (58%), Gaps = 29/372 (7%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +++ + + W + RL L+ + LW + A + RE L + + Sbjct: 119 IAQSIQVIKRRLQWKKLLVRLKVLSAELNKSDLWDDPTHAGKISREHGSLTGKMKGVMTF 178 Query: 63 QDRLCDNLILLELALEEDD----------------------------CSILQETSDNLQR 94 + L +++ +L+LA EE+D +ET L Sbjct: 179 ERELLEHIDMLKLAKEENDSELESVGVLALISQTLGMFSFSVSVSLGMINPKETLKALID 238 Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 ++ + K+ E+LLS + D Y+EV AGAGGTES DWA M++ MY WA++RKF Sbjct: 239 MRRVSKEKELEALLSADNDPCSCYIEVQAGAGGTESNDWAAMVMEMYKTWAQRRKFSVTV 298 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 ++ GE AGIK AT+ + G AYG+ K E GVHRLVRISP+DS RRHTSF+++ V P+ Sbjct: 299 VDEAPGEIAGIKRATIKVNGEYAYGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPI 358 Query: 215 -VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 D S +EI++SD RI+ +R+ GAGGQH NTTDSAVRI HIPTG+ CQ ERSQH NK Sbjct: 359 LGDGSTRVEINDSDLRIERFRSGGAGGQHANTTDSAVRIVHIPTGITATCQNERSQHSNK 418 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A A +L+++L +LE+ ++ + S TEI WG QIR+YVL PY+MVKDLRTN E + Sbjct: 419 ASAMAVLQSRLDQLEMARQTAMNAQHTQSLTEISWGNQIRTYVLHPYRMVKDLRTNYEVS 478 Query: 334 SPSDVLDGDLDD 345 P VL+GDLD+ Sbjct: 479 DPDSVLEGDLDE 490 >gi|118443694|ref|YP_879014.1| peptide chain release factor 1 [Clostridium novyi NT] gi|166223551|sp|A0Q312|RF1_CLONN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|118134150|gb|ABK61194.1| peptide chain release factor 1 [Clostridium novyi NT] Length = 357 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 117/351 (33%), Positives = 193/351 (54%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + + L+ K DP + N E + L +E L+ ++ +E + + Sbjct: 1 MLDKLEFTENKYEELSIKISDPSVMANQNEWRKLCKEHAELETIVTKYREYKTNKEELEA 60 Query: 72 LLELALEEDDCSILQETSDNLQRIK----LEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 E+ EE D + + + ++ ++ + E + L D + ++E+ AGAGG Sbjct: 61 NKEMLSEETDKDMKEMIQEEIKTLEESIVKDQEELKILLLPKDPNDDKNVFIEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR+AE+ +KTE + ++ + G K +++G AY +K E GV Sbjct: 121 DEAALFAANLFRMYTRYAERHGWKTELMSANETDIGGFKEVVFMLRGDCAYSKMKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S+ R HTS +++ V P D ++I+I +D R+D +RASG GGQ VNTTD Sbjct: 181 HRVQRVPDTESSGRIHTSTATVAVLP-EVDDVDIQIDPNDIRVDVFRASGHGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+VV CQ E+SQ KNK +A +L+A+LYE +R A+I K+++G Sbjct: 240 SAVRMTHIPTGIVVSCQDEKSQLKNKEKAMKVLKARLYEKAEAER--SASISADRKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V + R + LDGD+++ + A + ++ Sbjct: 298 TGDRSERIRTYNY-PQGRVTEHRIGLTLYKLEAFLDGDMEEVIDALITAEQ 347 >gi|161618874|ref|YP_001592761.1| peptide chain release factor 2 [Brucella canis ATCC 23365] gi|254704223|ref|ZP_05166051.1| peptide chain release factor 2 [Brucella suis bv. 3 str. 686] gi|260566529|ref|ZP_05836999.1| peptide chain release factor 2 [Brucella suis bv. 4 str. 40] gi|261754891|ref|ZP_05998600.1| peptide chain release factor 2 [Brucella suis bv. 3 str. 686] gi|161335685|gb|ABX61990.1| peptide chain release factor 2 [Brucella canis ATCC 23365] gi|260156047|gb|EEW91127.1| peptide chain release factor 2 [Brucella suis bv. 4 str. 40] gi|261744644|gb|EEY32570.1| peptide chain release factor 2 [Brucella suis bv. 3 str. 686] Length = 321 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 203/309 (65%), Positives = 258/309 (83%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ L+++I+ I ++ L D++ L+ + EE D SI+++ ++ +K E++ +Q + Sbjct: 1 MRERQQLEDSINGINHLKQMLNDSVELIAMGEEEGDKSIVEDAEKTIRDLKDEIDRRQID 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LLSGEAD+ND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+ K E +E+H+GEEAGI Sbjct: 61 MLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+L+KG N+YG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+IE++++E Sbjct: 121 KSATILVKGHNSYGMLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE + ++KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG + Sbjct: 241 EEELKKREEATDAANATKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTP 300 Query: 346 FMKATLAIK 354 FM+A LA + Sbjct: 301 FMEAALAHR 309 >gi|28897517|ref|NP_797122.1| peptide chain release factor 1 [Vibrio parahaemolyticus RIMD 2210633] gi|153840439|ref|ZP_01993106.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ3810] gi|260364112|ref|ZP_05776832.1| peptide chain release factor 1 [Vibrio parahaemolyticus K5030] gi|260897557|ref|ZP_05906053.1| peptide chain release factor 1 [Vibrio parahaemolyticus Peru-466] gi|260903527|ref|ZP_05911922.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ4037] gi|31076863|sp|Q87RN4|RF1_VIBPA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|28805729|dbj|BAC59006.1| peptide chain release factor 1 [Vibrio parahaemolyticus RIMD 2210633] gi|149745897|gb|EDM57027.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ3810] gi|308086350|gb|EFO36045.1| peptide chain release factor 1 [Vibrio parahaemolyticus Peru-466] gi|308110855|gb|EFO48395.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ4037] gi|308114221|gb|EFO51761.1| peptide chain release factor 1 [Vibrio parahaemolyticus K5030] Length = 362 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 115/339 (33%), Positives = 178/339 (52%), Gaps = 9/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R + DP + + + + L +E L+ + Q D E+ Sbjct: 9 LETLVERYEEVQHLLGDPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQDDLAAAEEM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 A E+D+ + + Q L D + +LE+ AGAGG E+ Sbjct: 69 AKEDDEEMREMAQEEIKDAKEAIERLADELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AEKR ++ E + ++ E G K + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RI Sbjct: 189 VPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG VV+CQ ERSQHKNKA+A +L A++ + E ++R + ++ + +G G Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEQERRAAE--VSDTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +IR+Y P V D R N+ ++V++GDL + Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTIYRLNEVMEGDLQSLID 344 >gi|258648792|ref|ZP_05736261.1| peptide chain release factor 2 [Prevotella tannerae ATCC 51259] gi|260851127|gb|EEX70996.1| peptide chain release factor 2 [Prevotella tannerae ATCC 51259] Length = 371 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 132/358 (36%), Positives = 208/358 (58%), Gaps = 11/358 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L D D L +T+ P W + A+ M++ + ++ + ++ Sbjct: 10 VQTRAEALHKYLDIDAKRVELEEEQLRTQAPDFWDDPKRAEEQMKKVKGIEKWVIDYNDV 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + E D+ +E + Q+ +E + ++L GE DS DA L+++ Sbjct: 70 CLLVGELETAFEFYK--DELVTEEEVDADYQKAIDAIEALELRNMLRGEEDSMDAVLKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDWA+ML+RMY R+AE + +KT + DG+EAGIK+ T+ I+G AYG+LK Sbjct: 128 SGAGGTESQDWASMLMRMYLRYAEAQGYKTRISNLQDGDEAGIKTVTIEIEGDYAYGYLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR+SPY++ +R TSF+S++V P+VDD+IE+ + S D +R+ GAGGQ+ Sbjct: 188 SENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDNIEVYVDPSKISWDLFRSGGAGGQN 247 Query: 243 VNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 VN ++ VR+ + T ++++ + R Q +N+ A +LR++LY+ LQKR Sbjct: 248 VNKVETGVRLRYQYTDPDTGETEEILIENTESRKQLENRENAMRLLRSQLYDRALQKRRA 307 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ K +I WG QIRSYV + VKD RTN + + + V+DG LD F+KA L Sbjct: 308 AQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKLDGFIKAYLM 364 >gi|312131222|ref|YP_003998562.1| bacterial peptide chain release factor 1 (brf-1) [Leadbetterella byssophila DSM 17132] gi|311907768|gb|ADQ18209.1| bacterial peptide chain release factor 1 (bRF-1) [Leadbetterella byssophila DSM 17132] Length = 358 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 115/346 (33%), Positives = 188/346 (54%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72 + V+R ++ + P + ++ + K + +E + L+ + + L + + Sbjct: 6 LEGIVERFDEVSQQITMPEVVSDMEKFKKISKEYRDLEKIVQEYNAYKLILAHLDEAKEI 65 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQ 131 L +E+ + + D L K E E + E + DS D+ LE+ AG GG E+ Sbjct: 66 LATEKDEEMREMAKLELDELSPKKEEAEERLKELLIPKDPNDSKDSILEIRAGTGGDEAS 125 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R+A ++ ++ ++ D G K + +KG + YG LK E GVHR+ Sbjct: 126 IFAGDLFRMYQRFAAQQGWQFTVMDFTDAPSGGYKEIVVSVKGEDVYGKLKYESGVHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P D ++++I+ +D R DT+ +SGAGGQ VNTT SAVR Sbjct: 186 RVPATESQGRIHTSAATVAVLP-EADEVDVQINMNDIRKDTFCSSGAGGQSVNTTYSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +THIPTG+VVQCQ ERSQ KN +A +LR++LYE+EL K+ E +I K+ +G G + Sbjct: 245 VTHIPTGLVVQCQDERSQIKNFDKALTVLRSRLYEIELAKQNE--SIAGERKSLVGSGDR 302 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P V D R + V++G++ +F++ + Sbjct: 303 SDKIRTYNY-PQGRVTDHRIGFTVYNLPHVMEGNIGEFIEKLRLAE 347 >gi|15642178|ref|NP_231810.1| peptide chain release factor 1 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|147674456|ref|YP_001217695.1| peptide chain release factor 1 [Vibrio cholerae O395] gi|153213234|ref|ZP_01948646.1| peptide chain release factor 1 [Vibrio cholerae 1587] gi|153801649|ref|ZP_01956235.1| peptide chain release factor 1 [Vibrio cholerae MZO-3] gi|153818801|ref|ZP_01971468.1| peptide chain release factor 1 [Vibrio cholerae NCTC 8457] gi|153823572|ref|ZP_01976239.1| peptide chain release factor 1 [Vibrio cholerae B33] gi|153825583|ref|ZP_01978250.1| peptide chain release factor 1 [Vibrio cholerae MZO-2] gi|153828626|ref|ZP_01981293.1| peptide chain release factor 1 [Vibrio cholerae 623-39] gi|227082304|ref|YP_002810855.1| peptide chain release factor 1 [Vibrio cholerae M66-2] gi|229507743|ref|ZP_04397248.1| peptide chain release factor 1 [Vibrio cholerae BX 330286] gi|229512021|ref|ZP_04401500.1| peptide chain release factor 1 [Vibrio cholerae B33] gi|229513825|ref|ZP_04403287.1| peptide chain release factor 1 [Vibrio cholerae TMA 21] gi|229519157|ref|ZP_04408600.1| peptide chain release factor 1 [Vibrio cholerae RC9] gi|229522130|ref|ZP_04411547.1| peptide chain release factor 1 [Vibrio cholerae TM 11079-80] gi|229524175|ref|ZP_04413580.1| peptide chain release factor 1 [Vibrio cholerae bv. albensis VL426] gi|229528814|ref|ZP_04418204.1| peptide chain release factor 1 [Vibrio cholerae 12129(1)] gi|229607288|ref|YP_002877936.1| peptide chain release factor 1 [Vibrio cholerae MJ-1236] gi|254291410|ref|ZP_04962203.1| peptide chain release factor 1 [Vibrio cholerae AM-19226] gi|254849258|ref|ZP_05238608.1| peptide chain release factor 1 [Vibrio cholerae MO10] gi|255745092|ref|ZP_05419041.1| peptide chain release factor 1 [Vibrio cholera CIRS 101] gi|262167528|ref|ZP_06035234.1| peptide chain release factor 1 [Vibrio cholerae RC27] gi|20139356|sp|Q9KQ25|RF1_VIBCH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|172047628|sp|A5F696|RF1_VIBC3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790906|sp|C3LPI4|RF1_VIBCM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|9656733|gb|AAF95324.1| peptide chain release factor 1 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|124116034|gb|EAY34854.1| peptide chain release factor 1 [Vibrio cholerae 1587] gi|124122826|gb|EAY41569.1| peptide chain release factor 1 [Vibrio cholerae MZO-3] gi|126510644|gb|EAZ73238.1| peptide chain release factor 1 [Vibrio cholerae NCTC 8457] gi|126518907|gb|EAZ76130.1| peptide chain release factor 1 [Vibrio cholerae B33] gi|146316339|gb|ABQ20878.1| peptide chain release factor 1 [Vibrio cholerae O395] gi|148875897|gb|EDL74032.1| peptide chain release factor 1 [Vibrio cholerae 623-39] gi|149740734|gb|EDM54833.1| peptide chain release factor 1 [Vibrio cholerae MZO-2] gi|150422740|gb|EDN14694.1| peptide chain release factor 1 [Vibrio cholerae AM-19226] gi|227010192|gb|ACP06404.1| peptide chain release factor 1 [Vibrio cholerae M66-2] gi|227014075|gb|ACP10285.1| peptide chain release factor 1 [Vibrio cholerae O395] gi|229332588|gb|EEN98074.1| peptide chain release factor 1 [Vibrio cholerae 12129(1)] gi|229337756|gb|EEO02773.1| peptide chain release factor 1 [Vibrio cholerae bv. albensis VL426] gi|229341055|gb|EEO06060.1| peptide chain release factor 1 [Vibrio cholerae TM 11079-80] gi|229343846|gb|EEO08821.1| peptide chain release factor 1 [Vibrio cholerae RC9] gi|229349006|gb|EEO13963.1| peptide chain release factor 1 [Vibrio cholerae TMA 21] gi|229351986|gb|EEO16927.1| peptide chain release factor 1 [Vibrio cholerae B33] gi|229355248|gb|EEO20169.1| peptide chain release factor 1 [Vibrio cholerae BX 330286] gi|229369943|gb|ACQ60366.1| peptide chain release factor 1 [Vibrio cholerae MJ-1236] gi|254844963|gb|EET23377.1| peptide chain release factor 1 [Vibrio cholerae MO10] gi|255736922|gb|EET92318.1| peptide chain release factor 1 [Vibrio cholera CIRS 101] gi|262024100|gb|EEY42795.1| peptide chain release factor 1 [Vibrio cholerae RC27] gi|327484701|gb|AEA79108.1| Peptide chain release factor 1 [Vibrio cholerae LMA3894-4] Length = 362 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 115/346 (33%), Positives = 180/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72 ++ V+R + DP + + + + L +E L+ + Q D + Sbjct: 9 LESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + E E I+ + Q L D + +LE+ AGAGG E+ Sbjct: 69 AQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AEK+ ++ E + + E G K + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P + ++ EI SD +IDT+R+SGAGGQHVNTTDSA+RI Sbjct: 189 VPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E KR I ++ + +G G Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAE--ISDTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ ++V++GD+ + + + Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTVYRLTEVMEGDMQSLIDPVIHEHQ 351 >gi|328473485|gb|EGF44333.1| peptide chain release factor 1 [Vibrio parahaemolyticus 10329] Length = 362 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 115/339 (33%), Positives = 178/339 (52%), Gaps = 9/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R + DP + + + + L +E L+ + Q D E+ Sbjct: 9 LETLVERYEEVQHLLGDPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQDDLAAAEEM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 A E+D+ + + Q L D + +LE+ AGAGG E+ Sbjct: 69 AKEDDEEMREMAQEEIKDAKEAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AEKR ++ E + ++ E G K + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RI Sbjct: 189 VPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG VV+CQ ERSQHKNKA+A +L A++ + E ++R + ++ + +G G Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEQERRAAE--VSDTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +IR+Y P V D R N+ ++V++GDL + Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTIYRLNEVMEGDLQSLID 344 >gi|34539945|ref|NP_904424.1| peptide chain release factor 1 [Porphyromonas gingivalis W83] gi|46576709|sp|Q7MXT5|RF1_PORGI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|34396256|gb|AAQ65323.1| peptide chain release factor 1 [Porphyromonas gingivalis W83] Length = 361 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 103/346 (29%), Positives = 175/346 (50%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R ++T DP + ++ L +E + L+ + ++ ++ L + Sbjct: 10 LDGLESRFEEISTLITDPAVIADMKRFTKLSKEYRDLEKIHTAGRDYRNLLANIEEAKHT 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 +E D + + + L + + + + D +A +E+ G GG E+ Sbjct: 70 MAKESDEELREMAREMLAEANERLPILEEEIKMLLIPANPEDDKNAIVEIRGGTGGDEAA 129 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY ++ E + ++ E ++ +G G K +KG YG LK E GVHR+ Sbjct: 130 LFAGDLYRMYVKYCESKGWQVEVTDLSEGATGGYKEIVFSVKGEGVYGILKYESGVHRVQ 189 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P + +++EI+ +D + T R+ GAGGQ+VN ++ V+ Sbjct: 190 RVPATETQGRIHTSAATVAVLP-EAEEVDVEINPADIEMQTSRSGGAGGQNVNKVETKVQ 248 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +TH PTG+VV CQQ RSQ N+ A MLR+KLY++EL K E I KT + G + Sbjct: 249 LTHKPTGMVVVCQQARSQIANRELAMQMLRSKLYDIELSKHNEA--IAARRKTMVSTGDR 306 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P V D R N+ + S V+DG++ F+ A + + Sbjct: 307 SAKIRTYNY-PQGRVTDHRINMTVYNLSAVMDGEVQPFIDALIIAE 351 >gi|149277162|ref|ZP_01883304.1| peptide chain release factor RF-2 [Pedobacter sp. BAL39] gi|149232039|gb|EDM37416.1| peptide chain release factor RF-2 [Pedobacter sp. BAL39] Length = 324 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 140/324 (43%), Positives = 208/324 (64%), Gaps = 2/324 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 T P W + +A+ + + + +L D ++ + D + + Sbjct: 1 MTLQPGFWDDPKKAEKHLAAINSKKVWTDAWQVVNAKLEDTEVMFDFLQAGDATAEEMQE 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + +E + +++LS + D A +++ AGAGGTES DWA ML+RMY W EK Sbjct: 61 QYDE--CLALIEALELKNMLSSKEDQLHAVMQITAGAGGTESCDWAAMLMRMYIMWGEKN 118 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 +K + +GE AG+KS TL G +YG+LKGE GVHRLVRISP+DSN+RRHTSF+S Sbjct: 119 GYKVTEQDYQEGEVAGVKSVTLQFAGDFSYGYLKGENGVHRLVRISPFDSNARRHTSFAS 178 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 ++VYP+VDD+IEIE+ +S+ +T+R+ GAGGQ+VN ++AVR+ H P+G+V++ Q+ RS Sbjct: 179 VYVYPLVDDTIEIEVKDSEIEFETFRSGGAGGQNVNKVETAVRLYHKPSGIVIKNQESRS 238 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q +NK A +L+++LYE E++KR E E SK +I WG QIR+YVL PY++VKDLRT Sbjct: 239 QLQNKENAMRLLKSQLYEAEMRKRMEATAAIEGSKKKIEWGSQIRNYVLHPYKLVKDLRT 298 Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352 N E ++ VLDG+L++F+KA L Sbjct: 299 NYETSNAQGVLDGELNEFLKAYLM 322 >gi|90412790|ref|ZP_01220790.1| peptide chain release factor 1 [Photobacterium profundum 3TCK] gi|90326149|gb|EAS42576.1| peptide chain release factor 1 [Photobacterium profundum 3TCK] Length = 362 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 114/346 (32%), Positives = 183/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R + DP + + + + L +E L++ + D E+ Sbjct: 9 LETLVERYEEIQHLLGDPGILSDQNKFRALSKEYSQLEDITQCFQAYLGAKDDLEAAEEM 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 A E+D + + I + Q + D + ++E+ AGAGG E+ Sbjct: 69 AKEDDPEMREMAQEEVKESKANILRLEDELQVLLIPKDPNDDRNCFVEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE+R ++ E + + E+ G K + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAERRGWRIEVINENRSEQGGYKEMIAKVSGDGAYGILKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P + ++ EI+ D +IDT+R+SGAGGQHVNTTDSA+RI Sbjct: 189 VPATESQGRVHTSACTVAVMPEIPEAEIPEINTGDLKIDTFRSSGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR + + +G G Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRHAE--EASTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + ++V++GDLD ++ + + Sbjct: 307 DRIRTYNY-PQGRVSDHRITLTLYRLNEVMEGDLDSLIQPVIQEHQ 351 >gi|313816439|gb|EFS54153.1| peptide chain release factor 2 [Propionibacterium acnes HL059PA1] gi|313827262|gb|EFS64976.1| peptide chain release factor 2 [Propionibacterium acnes HL063PA2] gi|314917824|gb|EFS81655.1| peptide chain release factor 2 [Propionibacterium acnes HL050PA1] gi|314919714|gb|EFS83545.1| peptide chain release factor 2 [Propionibacterium acnes HL050PA3] gi|314930043|gb|EFS93874.1| peptide chain release factor 2 [Propionibacterium acnes HL067PA1] gi|314956378|gb|EFT00690.1| peptide chain release factor 2 [Propionibacterium acnes HL027PA1] gi|314957250|gb|EFT01353.1| peptide chain release factor 2 [Propionibacterium acnes HL002PA1] gi|314967699|gb|EFT11798.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA1] gi|315098170|gb|EFT70146.1| peptide chain release factor 2 [Propionibacterium acnes HL059PA2] gi|315101677|gb|EFT73653.1| peptide chain release factor 2 [Propionibacterium acnes HL046PA1] gi|315109496|gb|EFT81472.1| peptide chain release factor 2 [Propionibacterium acnes HL030PA2] gi|327452380|gb|EGE99034.1| peptide chain release factor 2 [Propionibacterium acnes HL087PA3] gi|327452743|gb|EGE99397.1| peptide chain release factor 2 [Propionibacterium acnes HL083PA2] gi|328753837|gb|EGF67453.1| peptide chain release factor 2 [Propionibacterium acnes HL087PA1] Length = 370 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 152/353 (43%), Positives = 221/353 (62%), Gaps = 3/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L+ + + D + ++ L + P+LW + A+ + L I ++ + Sbjct: 16 LDASLSSIENVLDPEAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +LLE A +D S+ + T +++ E++ + +LLSG+ D +A + + Sbjct: 76 RARIEDVHVLLEFAAADDKESLAEAT-TETVKLREEIDALEVRTLLSGQYDEREAVVTIR 134 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A MLLRMY RW+E+ +K E L+ EEAGIKSAT ++ P AYG L Sbjct: 135 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 194 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ ++I ESD R+D + ASG GGQ Sbjct: 195 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 254 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A +L+AKL E +++E N +S Sbjct: 255 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSE 314 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRTN E + V DGD+DDF+ A + ++ Sbjct: 315 GN--SWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 365 >gi|222529063|ref|YP_002572945.1| peptide chain release factor 1 [Caldicellulosiruptor bescii DSM 6725] gi|312622681|ref|YP_004024294.1| peptide chain release factor 1 [Caldicellulosiruptor kronotskyensis 2002] gi|254790859|sp|B9MR68|RF1_ANATD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|222455910|gb|ACM60172.1| peptide chain release factor 1 [Caldicellulosiruptor bescii DSM 6725] gi|312203148|gb|ADQ46475.1| peptide chain release factor 1 [Caldicellulosiruptor kronotskyensis 2002] Length = 355 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 117/343 (34%), Positives = 177/343 (51%), Gaps = 11/343 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ L K DP + E + LM+E +L + +E + L EL Sbjct: 5 LQVIEEKYLELEKKISDPEIISQPQEWQKLMKEHSNLQPIVEKFREYKRILDTIKEAEEL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 + D + + L R K + E + L D + +E+ AGAGG E+ Sbjct: 65 LDTDLDEDFEKLVKEELNRAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAGGEEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AE++ +K E + + + G K +I G AY LK E GVHR+ Sbjct: 125 LFAAELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + +E+EI E D IDT+RA GAGGQHVN T+SAVR Sbjct: 185 RVPVTESGGRIHTSTATVAVLP-EVEDVEVEIREEDLEIDTFRAGGAGGQHVNKTESAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 I H PTG+VV CQ ERSQH N+ +A +LRA+LY+ +++ ++++G G Sbjct: 244 IVHKPTGIVVTCQDERSQHANRDRAMKILRARLYDYYQSIQQKEIE--SQRRSQVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R + +LDG+LD+ + A + Sbjct: 302 SERIRTYNF-PQGRVTDHRIGLTLYKLEQILDGELDEIIDALI 343 >gi|330967416|gb|EGH67676.1| peptide chain release factor 1 [Pseudomonas syringae pv. actinidiae str. M302091] Length = 360 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 116/346 (33%), Positives = 174/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + RE ++ ++ ++ D L Sbjct: 9 LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYTQLARVQGDLEGAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + + Q L D + +LE+ AG GG E+ Sbjct: 69 LKDSDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AE+R ++ E L ++GE G K ++G + YG LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGESVYGKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI+ +D R+DTYR+SGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + Q I K +G G Sbjct: 249 THLPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAANAIASERKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ S +VL G +D ++ LA + Sbjct: 307 ERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQ 351 >gi|330814308|ref|YP_004358547.1| peptide chain release factor 2 [Candidatus Pelagibacter sp. IMCC9063] gi|327487403|gb|AEA81808.1| peptide chain release factor 2 [Candidatus Pelagibacter sp. IMCC9063] Length = 312 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 172/307 (56%), Positives = 233/307 (75%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 +++E+ HL+ ++ K ++ L + L+EL +++D ++ +E +L++++L++ + Sbjct: 2 VIKEKNHLERILNDYKSYKEELTNIKELVELNTKDNDENLTKELEMSLKKLELKIREIEL 61 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 LS + D D Y+E+HAGAGGTESQDWA ML MY +WAEK+ F + GEE G Sbjct: 62 FCFLSKKNDELDVYVEIHAGAGGTESQDWAEMLRTMYIKWAEKKSFSFSLISETKGEEVG 121 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 KS+T+ I+G AYG+L+ E GVHRLVRISP+DS+ RRHTSF+S+WVYPVV++S+ ++I+ Sbjct: 122 FKSSTIKIEGKYAYGFLRHESGVHRLVRISPFDSDKRRHTSFASVWVYPVVNESVVVDIN 181 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 + D RIDTYR+SGAGGQHVNTTDSAVRITH PT +VVQCQ ERSQHKNK A NML+A+L Sbjct: 182 DKDLRIDTYRSSGAGGQHVNTTDSAVRITHQPTNIVVQCQNERSQHKNKDTAMNMLKARL 241 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YELELQK++E + ESSKT+IGWG QIRSYVLQPYQMVKD RT +E+T P VLDG L+ Sbjct: 242 YELELQKKKEESKSVESSKTDIGWGHQIRSYVLQPYQMVKDSRTGLERTDPDKVLDGHLN 301 Query: 345 DFMKATL 351 F++ +L Sbjct: 302 PFLEESL 308 >gi|327329965|gb|EGE71719.1| peptide chain release factor 2 [Propionibacterium acnes HL097PA1] Length = 370 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 151/353 (42%), Positives = 221/353 (62%), Gaps = 3/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L+ + + D + ++ L + P+LW + A+ + L I ++ + Sbjct: 16 LDASLSSIENVLDPEAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +LLE A +D S+ + T +++ E++ + +LLSG+ D +A + + Sbjct: 76 RARIEDVHVLLEFAAADDKESLAEAT-TETVKLREEIDALEVRTLLSGQYDEREAVVTIR 134 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A MLLRMY RW+E+ +K E L+ EEAGIK+AT ++ P AYG L Sbjct: 135 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKAATFVVHAPFAYGTLS 194 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ ++I ESD R+D + ASG GGQ Sbjct: 195 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 254 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A +L+AKL E +++E N +S Sbjct: 255 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSE 314 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRTN E + V DGD+DDF+ A + ++ Sbjct: 315 GN--SWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 365 >gi|302186444|ref|ZP_07263117.1| peptide chain release factor 1 [Pseudomonas syringae pv. syringae 642] Length = 360 Score = 232 bits (592), Expect = 5e-59, Method: Composition-based stats. Identities = 116/346 (33%), Positives = 174/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + RE ++ ++ ++ D L Sbjct: 9 LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYAQLLRVQGDLEGAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + + Q L D + +LE+ AG GG E+ Sbjct: 69 LKDSDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AE+R ++ E L ++GE G K ++G + YG LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGESVYGKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI+ +D R+DTYR+SGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + Q I K +G G Sbjct: 249 THLPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAANAIASERKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ S +VL G +D ++ LA + Sbjct: 307 ERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQ 351 >gi|317048556|ref|YP_004116204.1| peptide chain release factor 1 [Pantoea sp. At-9b] gi|316950173|gb|ADU69648.1| peptide chain release factor 1 [Pantoea sp. At-9b] Length = 360 Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats. Identities = 114/337 (33%), Positives = 175/337 (51%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + +E Q D L Sbjct: 9 LEALQERHEEVEALLGDAGVIADQERFRALSREYAQLSDVTRCFREWQQVQEDVETAEML 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE + + +E + L D ++EV AG GG E+ +A Sbjct: 69 LDDPEMREMAQEELKTSREKREVLEQQLQVLLLPKDPDDERPCFVEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +DGE G K + G AYG K E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWQVEIISSNDGEHGGYKEVIARVTGDGAYGRFKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ +I+ D +IDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVMPELPEAELPDINPGDLKIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A +L A+++ E+ KR E + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALAVLGARIHAAEMAKRHE--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 IR+Y P V D R N+ + ++G LD ++ Sbjct: 307 IRTYNF-PQGRVTDHRINLTIYRLDETMEGKLDSLIE 342 >gi|284039842|ref|YP_003389772.1| peptide chain release factor 1 [Spirosoma linguale DSM 74] gi|283819135|gb|ADB40973.1| peptide chain release factor 1 [Spirosoma linguale DSM 74] Length = 357 Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats. Identities = 112/350 (32%), Positives = 177/350 (50%), Gaps = 12/350 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + +R + + + P + L +E + L+ + + Q L + Sbjct: 1 MLDQLEAIRERFNEVAQQIVQPEAVSDQKRFMKLSKEYKDLEKIVVQYQAYQQLLEEIDN 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQF----ESLLSGEADSNDAYLEVHAGAGG 127 ++ E D + L + E + + DS + LE+ G GG Sbjct: 61 AKKIIATEKDEDFREMAKGELDELLPRRETLEETLKEMLMPKDPNDSKNVILEIRGGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY R+ EK ++ ++ +G G K I+G + YG LK E GV Sbjct: 121 DEAAIFAGDIFRMYQRFCEKMGWRMSLVDFTEGTSGGYKEIITEIEGEDVYGKLKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS +S+ V P + +++EI+ +D R DT+ +SGAGGQ VNTT Sbjct: 181 HRVQRVPATETQGRIHTSAASVAVLP-EAEEVDVEINMNDIRKDTFCSSGAGGQSVNTTY 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+VVQCQ ERSQ KN +A +LR++LYE+ELQK + I KT +G Sbjct: 240 SAVRLTHIPTGLVVQCQDERSQLKNFDKALTVLRSRLYEIELQKHND--AIASQRKTMVG 297 Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 G + IR+Y P V D R + + V+DG + +F++ + Sbjct: 298 SGDRSDKIRTYNY-PQSRVTDHRIGLTVYNLPSVMDGGIGEFIEQLRIAE 346 >gi|15896138|ref|NP_349487.1| peptide chain release factor 1 [Clostridium acetobutylicum ATCC 824] gi|20139340|sp|Q97F68|RF1_CLOAB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|15025931|gb|AAK80827.1|AE007785_12 Protein chain release factor A [Clostridium acetobutylicum ATCC 824] gi|325510292|gb|ADZ21928.1| peptide chain release factor 1 [Clostridium acetobutylicum EA 2018] Length = 359 Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats. Identities = 115/347 (33%), Positives = 187/347 (53%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L+ K DP + N E + L +E ++N + +E + D E+ Sbjct: 5 LEFIESKYDELSVKISDPSVMANQSEWQKLCKEHSEVENIVLKYREYKKAKEDLEADKEM 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 ++ D + + + ++ ++ V + E DS + ++E+ G GG E+ Sbjct: 65 LRDKIDAELKEMVEEEIKELEKSVVDYEEELRVMLLPKDPNDSKNVFVEIRGGTGGEEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYTR+AE++ + TE + ++ + G K ++KG AY +K E G HR+ Sbjct: 125 LFAADLFRMYTRYAERQGWHTEVMSANETDIGGFKEIVFMVKGNGAYSRMKYESGTHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S+ R HTS +++ V P D ++IEI+ +D RID +RASG GGQ VNTTDSAVR Sbjct: 185 RVPNTESSGRIHTSAATVAVLP-EVDDVDIEINPNDIRIDVFRASGHGGQCVNTTDSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV CQ E+ Q KNK +A +LRA+LYE +R A I E+ + ++G G Sbjct: 244 ITHLPTGIVVSCQDEKRQLKNKEKAMKVLRARLYEKAEAERN--AGIAENRRNQVGSGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + LDGD+D+ + + ++ Sbjct: 302 SERIRTYNF-PQGRITDHRIGLTIYKLEQFLDGDIDEVINGLITAEQ 347 >gi|95929013|ref|ZP_01311758.1| peptide chain release factor 1 [Desulfuromonas acetoxidans DSM 684] gi|95134914|gb|EAT16568.1| peptide chain release factor 1 [Desulfuromonas acetoxidans DSM 684] Length = 358 Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats. Identities = 117/345 (33%), Positives = 173/345 (50%), Gaps = 11/345 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCD 68 +FD + V R + DP + + + + L RE L + + Q + D Sbjct: 3 IFDKLEEVVDRFQEVEGLLSDPTVLSDQNKFRELTREHAELSEPVEVYRRYRQIQQEIED 62 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 N L+ + +E + E L D + LE+ AG GG Sbjct: 63 NRELMRDDDPDMREMAREELPALEDECEHLAEKLTLLMLPKDPNDGKNIILEIRAGTGGD 122 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L R Y+R+AEK ++K E + + G K +I G N Y LK E G H Sbjct: 123 EAALFAGDLFRAYSRYAEKHRWKVEIMSSSESGVGGFKEVIAMISGENVYSRLKYESGTH 182 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ ++ R HTS ++ V P + +++EI+ SD RID YRASGAGGQHVN T+S Sbjct: 183 RVQRVPETETQGRIHTSACTVAVLP-EAEEVDLEINPSDLRIDLYRASGAGGQHVNKTES 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITHIPTGVVV CQ E+SQHKNKA+A +LR+++ + + E+ A + K+++G Sbjct: 242 AVRITHIPTGVVVACQDEKSQHKNKARAMKVLRSRILDAM--EAEKHAEMAADRKSQVGS 299 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G +IR+Y P D R + ++ GDLD+ A Sbjct: 300 GDRSERIRTYNF-PQGRCTDHRIGLTLYKLDAIMQGDLDEVFDAL 343 >gi|109898878|ref|YP_662133.1| peptide chain release factor 1 [Pseudoalteromonas atlantica T6c] gi|119361579|sp|Q15SQ9|RF1_PSEA6 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|109701159|gb|ABG41079.1| bacterial peptide chain release factor 1 (bRF-1) [Pseudoalteromonas atlantica T6c] Length = 362 Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats. Identities = 118/339 (34%), Positives = 185/339 (54%), Gaps = 9/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R + P + + + + L +E L+ + + Q D E+ Sbjct: 9 LESLTERFEEVQALVSQPEIIADQDKYRALTKEYSQLEGVVKCFADYQGAQGDFESAQEM 68 Query: 76 ALEEDDCSILQETSDNL---QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E D + Q I+ + Q L D ++ ++E+ AGAGG E+ Sbjct: 69 MQESDPEMREMAQEEYKSSKQAIEQYEDELQILLLPKDPNDESNCFIEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE R++K E + +++G+ G K I G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAEARRWKVEVVTMNEGDHGGYKEVIANIIGDGAYGVLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P V +S IE++++D +IDT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRIHTSACTVVVMPEVPESEAIEVNKADLKIDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+P+G+VV+CQ ERSQHKN+A+A +L+++L +LE +KR+ + + + G Sbjct: 249 THVPSGIVVECQDERSQHKNRAKAMAVLQSRLNKLEEEKRQAE--ETSTRRNLVASGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +IR+Y P V D R N+ DV+ GDLD ++ Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYRLDDVVAGDLDAVLE 344 >gi|319790214|ref|YP_004151847.1| peptide chain release factor 1 [Thermovibrio ammonificans HB-1] gi|317114716|gb|ADU97206.1| peptide chain release factor 1 [Thermovibrio ammonificans HB-1] Length = 365 Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats. Identities = 118/347 (34%), Positives = 185/347 (53%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++ + P + + + + L +E + L E + LE+ Sbjct: 9 LEKIAKKFKEIEENLGKPEVIADQKKFQTLAKEHKELQPIYDTYMEYKKTRQGIEEALEI 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 ++ +++ + + ++ E + + D + LE+ AGAGG E+ Sbjct: 69 IEAGEEEELVELAKEEKKELEKRAEELEGELKKLLIPKDPNDEKNVILEIRAGAGGEEAA 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R+AE++ +K E L +++ GIK I G AY LK E GVHR+ Sbjct: 129 LFAQDLFRMYCRYAERKGWKVEILSMNETGLGGIKEVVATISGKGAYSRLKYESGVHRVQ 188 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ + P + +EIEI ESD +IDTYR+SGAGGQHVNTTDSAVR Sbjct: 189 RIPVTESGGRIHTSTATVAILP-EAEEVEIEIKESDLKIDTYRSSGAGGQHVNTTDSAVR 247 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV C ERSQ +N+ +A +LRA+L EL +R++ + + K ++G G Sbjct: 248 ITHLPTGIVVTCSNERSQIQNRIKAMKILRARLKELY--ERQQKEKMDSARKAQVGSGDR 305 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + + + LDGDLD+ + A A ++ Sbjct: 306 SEKIRTYNF-PEGRVTDHRIKLTLYNLQEFLDGDLDEMIDALAAAEQ 351 >gi|312795903|ref|YP_004028825.1| peptide Chain Release Factor 1 (RF-1) [Burkholderia rhizoxinica HKI 454] gi|312167678|emb|CBW74681.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Burkholderia rhizoxinica HKI 454] Length = 365 Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats. Identities = 116/344 (33%), Positives = 178/344 (51%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +RL LN + ++ + + L RE L + + + D EL Sbjct: 14 LEQLTKRLPELNELLSREDVTSDLDQYRKLTREHAELAPVVEQYAQWKTARNDEATAQEL 73 Query: 76 -ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 E + R++ Q L D + ++E+ AG GG ES +A Sbjct: 74 LTDPSMRDFAEDELNTARSRMEQLERDLQKMLLPKDPNDERNIFVEIRAGTGGDESALFA 133 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE+ +++ E + + G K + I G AY LK E G HR+ R+ Sbjct: 134 GDLLRMYLRYAERHRWQVEMMSESASDLGGYKEVIVRIIGQGAYSRLKFESGGHRVQRVP 193 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ EIE++ +D RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 194 ATETQGRIHTSACTVAVMPEADEIAEIELNPADLRIDTFRASGAGGQHINKTDSAVRITH 253 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQHKNK +A +L A++ + Q +E+ A + K+ +G G + Sbjct: 254 LPTGIVVECQDDRSQHKNKDRAMKVLAARIKDK--QYQEQHAKEAATRKSLVGSGDRSER 311 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++DGDLD + A ++ + Sbjct: 312 IRTYNF-PQGRLTDHRINVTLYKLEQMMDGDLDALIDALVSEHQ 354 >gi|258621065|ref|ZP_05716099.1| Peptide chain release factor 1 [Vibrio mimicus VM573] gi|258626137|ref|ZP_05720985.1| Peptide chain release factor 1 [Vibrio mimicus VM603] gi|262170842|ref|ZP_06038520.1| peptide chain release factor 1 [Vibrio mimicus MB-451] gi|258581492|gb|EEW06393.1| Peptide chain release factor 1 [Vibrio mimicus VM603] gi|258586453|gb|EEW11168.1| Peptide chain release factor 1 [Vibrio mimicus VM573] gi|261891918|gb|EEY37904.1| peptide chain release factor 1 [Vibrio mimicus MB-451] Length = 362 Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats. Identities = 115/346 (33%), Positives = 181/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72 ++ V+R + DP + + + + L +E L+ + Q D + Sbjct: 9 LESLVERYEEVQHLLGDPAVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + E E I+ + Q L D + +LE+ AGAGG E+ Sbjct: 69 AQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AEK+ ++ E + + E G K + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P + ++ EI SD +IDT+R+SGAGGQHVNTTDSA+RI Sbjct: 189 VPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E KR I ++ + +G G Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAE--ISDTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ ++V++GD+ ++ + + Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTVYRLTEVMEGDMQSLIEPVIHEHQ 351 >gi|91776824|ref|YP_546580.1| peptide chain release factor 1 [Methylobacillus flagellatus KT] gi|119361559|sp|Q1GYE8|RF1_METFK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|91710811|gb|ABE50739.1| bacterial peptide chain release factor 1 (bRF-1) [Methylobacillus flagellatus KT] Length = 360 Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats. Identities = 112/344 (32%), Positives = 181/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +RL LN + ++ + + RE + + + + D + Sbjct: 9 LATLSERLDELNRLLSSEDVTNDIDNYRKITREHAEITPIVEQFRAYEQAEIDIKEAQAM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + QE ++ ++ ++E + Q L D + +LE+ AG GG ES +A Sbjct: 69 LADPEMKEFAQEETEAGKQKLDDIEKQLQKLLLPKDPNDERNIFLEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE++ +K E + ++ E G K I+G AY LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAERQGWKVEIVSANESEVGGYKEIIAKIEGFGAYSKLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P VD+ ++ I+ +D RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 189 ETETQGRIHTSACTVAVLPEVDEVSDVTINPADIRIDTFRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 PTG+VV+CQ RSQH NKAQA +L A++ ++ +++ + I ++ IG G + Sbjct: 249 FPTGIVVECQDGRSQHSNKAQAMQVLAARIKAKQVDEQQ--SKIASERRSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ + +GD+D+ + A A + Sbjct: 307 IRTYNY-PQGRITDHRINLTLYKIDAITEGDMDELINALAAEHQ 349 >gi|283850198|ref|ZP_06367487.1| peptide chain release factor 2 [Desulfovibrio sp. FW1012B] gi|283574224|gb|EFC22195.1| peptide chain release factor 2 [Desulfovibrio sp. FW1012B] Length = 314 Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats. Identities = 145/311 (46%), Positives = 208/311 (66%), Gaps = 1/311 (0%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 ++RE+ L ++ +++ D + LA +++ IL ++ + + E+ + Sbjct: 4 ILREKSVLTAKVTGGEKLLAAKADLDEWMSLAKDDNSPEILDALAEQIVSLGSELADAEL 63 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + G D+ DA LE+H GAGGTE+QDWA MLLRMY RWAE+++F + L+ G+EAG Sbjct: 64 -AAFFGPEDNADAILEIHPGAGGTEAQDWAEMLLRMYRRWAERKQFGIKVLDFLPGDEAG 122 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 +KS TL I GP AYG L E+G+HRL+RISP+DS+ RRHTSF+S+ VYP I+I++ Sbjct: 123 VKSVTLQISGPYAYGLLDAEKGIHRLIRISPFDSSGRRHTSFASVDVYPDAGLDIDIDVK 182 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 E D R+D +RASG GGQHVN T SA+RITH+PTG+VVQCQ E+SQH+N+ A +L+A+L Sbjct: 183 EEDLRVDVFRASGPGGQHVNKTSSAIRITHLPTGIVVQCQNEKSQHRNRESAMKVLKARL 242 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 Y+LEL+K + SK IG+G QIR+Y +QPYQ+VKD RT +E V+DG+LD Sbjct: 243 YDLELKKIQAEKQENYDSKNAIGFGSQIRTYTMQPYQLVKDHRTGVEVGDVGAVMDGELD 302 Query: 345 DFMKATLAIKK 355 F++ L + Sbjct: 303 KFIRGYLLAGR 313 >gi|269102026|ref|ZP_06154723.1| peptide chain release factor 1 [Photobacterium damselae subsp. damselae CIP 102761] gi|268161924|gb|EEZ40420.1| peptide chain release factor 1 [Photobacterium damselae subsp. damselae CIP 102761] Length = 362 Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats. Identities = 117/342 (34%), Positives = 182/342 (53%), Gaps = 9/342 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + DP + + + + L +E L+ + + D E+ Sbjct: 9 LETLEERYEEVQHLLGDPSVISDQDKFRSLSKEYSQLEEVTKCFQAYKQAQDDLAAAEEM 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 A E+D + I+ + Q + D + +LE+ AGAGG E+ Sbjct: 69 ANEDDAEMREMAQEEIKEAKAEIERLEDELQVLLIPKDPNDERNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE+R ++ E + +D E G K + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAERRGWRIEVMSANDAEHGGYKEMIAKVTGDGAYGVLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P + ++ EI+ SD +IDTYR+SGAGGQHVNTTDSA+RI Sbjct: 189 VPATESQGRVHTSACTVAVLPEIPEAEIPEINPSDLKIDTYRSSGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR + + +G G Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRHAE--EASTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R + ++V++GD+D ++ L Sbjct: 307 DRIRTYNY-PQGRVSDHRITLTIYRLNEVMEGDVDCLIQPVL 347 >gi|126701107|ref|YP_001090004.1| peptide chain release factor 1 [Clostridium difficile 630] gi|254977108|ref|ZP_05273580.1| peptide chain release factor 1 [Clostridium difficile QCD-66c26] gi|255094436|ref|ZP_05323914.1| peptide chain release factor 1 [Clostridium difficile CIP 107932] gi|255102693|ref|ZP_05331670.1| peptide chain release factor 1 [Clostridium difficile QCD-63q42] gi|255308514|ref|ZP_05352685.1| peptide chain release factor 1 [Clostridium difficile ATCC 43255] gi|255316188|ref|ZP_05357771.1| peptide chain release factor 1 [Clostridium difficile QCD-76w55] gi|255518849|ref|ZP_05386525.1| peptide chain release factor 1 [Clostridium difficile QCD-97b34] gi|255652028|ref|ZP_05398930.1| peptide chain release factor 1 [Clostridium difficile QCD-37x79] gi|255657438|ref|ZP_05402847.1| peptide chain release factor 1 [Clostridium difficile QCD-23m63] gi|260685003|ref|YP_003216288.1| peptide chain release factor 1 [Clostridium difficile CD196] gi|260688661|ref|YP_003219795.1| peptide chain release factor 1 [Clostridium difficile R20291] gi|296449035|ref|ZP_06890825.1| peptide chain release factor RF1 [Clostridium difficile NAP08] gi|296879858|ref|ZP_06903831.1| peptide chain release factor RF1 [Clostridium difficile NAP07] gi|306521770|ref|ZP_07408117.1| peptide chain release factor 1 [Clostridium difficile QCD-32g58] gi|119361524|sp|Q180Y2|RF1_CLOD6 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|115252544|emb|CAJ70387.1| Peptide chain release factor 1 (RF-1) [Clostridium difficile] gi|260211166|emb|CBA66621.1| peptide chain release factor 1 [Clostridium difficile CD196] gi|260214678|emb|CBE07314.1| peptide chain release factor 1 [Clostridium difficile R20291] gi|296262128|gb|EFH08933.1| peptide chain release factor RF1 [Clostridium difficile NAP08] gi|296429147|gb|EFH15021.1| peptide chain release factor RF1 [Clostridium difficile NAP07] Length = 354 Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats. Identities = 121/347 (34%), Positives = 183/347 (52%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + L+ K DP + + + ++E L+ + +E + L E+ Sbjct: 5 LEVLEDTYKDLSEKIGDPDVINDQKVWQKYIKEHADLEPIVMKYREYKSVLDSIKESKEI 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 EE D + + L ++ +V + L D + +E+ GAGG E+ Sbjct: 65 LQEESDEELRELAKMELAEMEEKVAPLEEEIKILLLPKDPNDDKNVIVEIRGGAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AE+R++K E L D G K + +IKG AY LK E GVHR+ Sbjct: 125 LFAGDLFRMYSRYAERRRWKIELLSASDTGVGGYKEVSFMIKGKGAYSRLKYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS S++ V P + +E+EI+ +D RID +R+SG GGQ VNTTDSAVR Sbjct: 185 RIPSTESGGRIHTSTSTVAVLP-EVEDVEVEINPNDLRIDVFRSSGNGGQSVNTTDSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTG VV CQ +SQ KNK QA +L+A+LY+ L E+ +I K+++G G Sbjct: 244 VTHIPTGEVVSCQDGKSQLKNKEQALKILKARLYDKALA--EQHKDIAAERKSQVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ LDGD+D+ + A + + + Sbjct: 302 SERIRTYNF-PQGRISDHRINLTLYKLDAFLDGDIDEMIDALITVDQ 347 >gi|115472651|ref|NP_001059924.1| Os07g0546600 [Oryza sativa Japonica Group] gi|33146529|dbj|BAC79675.1| putative translation releasing factor2 [Oryza sativa Japonica Group] gi|113611460|dbj|BAF21838.1| Os07g0546600 [Oryza sativa Japonica Group] Length = 460 Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats. Identities = 130/358 (36%), Positives = 214/358 (59%), Gaps = 4/358 (1%) Query: 1 MKLS-RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59 ++L+ +++ + D + ++ L K+ D LW + +A+ ++ + + + + Sbjct: 92 VELAVARVSEVRQSAGLDQLEEEIASLEKKSADSSLWDDPSKAQEILVALTEVKDRVKLL 151 Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSGEADSNDA 117 +++ ++ + +++L E D + ++ + LLSG D A Sbjct: 152 NDLKLQVEEAETIVKLTEELDSIDTGLLEEASKIIKALNKALDNFEMTQLLSGPYDKEGA 211 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 + + AGAGGT++QDWA+MLLRMY RW EK+++KT +E GEEAGIKSAT+ ++G A Sbjct: 212 VINITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSATIELEGRYA 271 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRAS 236 YG+L GE+G HR+VR SP+++ R TSF+ + V P+ ++S+++EI E D I RA Sbjct: 272 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESMDVEIPEEDLEISFTRAG 331 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQ+VN ++AVR+ HIPTG+ V+C +ERSQ NK +A + L+AKL + ++R Sbjct: 332 GKGGQNVNKVETAVRMVHIPTGIAVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEI 391 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG+QIR+YV PY++VKD+RT E + + V+DG+LD F++A L K Sbjct: 392 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTACETSDITGVMDGELDTFIRAYLKYK 449 >gi|254468209|ref|ZP_05081615.1| peptide chain release factor 1 [beta proteobacterium KB13] gi|207087019|gb|EDZ64302.1| peptide chain release factor 1 [beta proteobacterium KB13] Length = 358 Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats. Identities = 116/339 (34%), Positives = 178/339 (52%), Gaps = 7/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +N + + LN K + ++ K + +E L I + + + E+ Sbjct: 9 LENLILKYEELNNKLSSEGITSDLDLFKKISKEHADLTPIIETYSGYKKLVKNIEEAKEM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + QE DN + + E Q + D + +LE+ AG GG ES +A Sbjct: 69 LSDPEMKEFAQEEIDNSKDEIINFESKLQTLLIPKDPNDDKNIFLEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMYTR+AE+ + E + ++ G K I G AY LK E G HR+ R+ Sbjct: 129 ADLYRMYTRYAERNNWNVEVISSNESGLGGYKEIIAKINGDGAYSKLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ +++I+ +D RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 189 DTETQGRIHTSACTVAVLPEADEIEDVDINPADIRIDTYRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 PTG+VV+CQ +RSQH+NKAQA ++L AK+ + ++Q + + K+ IG G + Sbjct: 249 EPTGIVVECQDDRSQHRNKAQAMSILAAKIKDNQIQ--AQQSQRASERKSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P + D R N+ ++DGDL++ + A Sbjct: 307 IRTYNF-PQGRITDHRINLTLYKIDFIMDGDLEEMINAL 344 >gi|239996062|ref|ZP_04716586.1| peptide chain release factor 1 [Alteromonas macleodii ATCC 27126] Length = 361 Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 120/346 (34%), Positives = 185/346 (53%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72 ++ V+R + DP + + + + L +E L++ ++ Q + + Sbjct: 9 LEHLVERFEEVQALLGDPGVIGDQDKFRNLSKEFSQLEDVVAGFNAYQQAQENLASAQEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L E +E D I+ Q L D N+ +LE+ AGAGG E+ Sbjct: 69 LNEDDAEMREMAQEEMKDAKAEIERLETELQVLLLPKDPNDDNNCFLEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE R ++ E + ++GE G K + G YG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAESRGWRVELVNANEGEHGGYKEVIANVSGDGVYGVLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P + +S IEI+ ++ RIDT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRIHTSACTVAVLPEIPESQAIEINPAELRIDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ ERSQHKN+A+A ++L+A+L ++E + A + K+ +G G Sbjct: 249 THLPTGLVVECQDERSQHKNRAKAMSVLQARLNQIEE--EKRAAEEASTRKSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +V++GDL + L + Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTIYRLDEVVEGDLKQLIDPILQEHQ 351 >gi|254226890|ref|ZP_04920458.1| peptide chain release factor 1 [Vibrio cholerae V51] gi|125620572|gb|EAZ48938.1| peptide chain release factor 1 [Vibrio cholerae V51] Length = 362 Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 115/346 (33%), Positives = 180/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72 ++ V+R + DP + + + + L +E L+ + Q D + Sbjct: 9 LESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + E E I+ + Q L D + +LE+ AGAGG E+ Sbjct: 69 AQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPDDDRNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AEK+ ++ E + + E G K + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P + ++ EI SD +IDT+R+SGAGGQHVNTTDSA+RI Sbjct: 189 VPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E KR I ++ + +G G Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAE--ISDTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ ++V++GD+ + + + Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTVYRLTEVMEGDMQSLIDPVIHEHQ 351 >gi|161349962|ref|YP_047013.2| peptide chain release factor 1 [Acinetobacter sp. ADP1] gi|61214614|sp|Q6F9S2|RF1_ACIAD RecName: Full=Peptide chain release factor 1; Short=RF-1 Length = 362 Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 116/339 (34%), Positives = 173/339 (51%), Gaps = 7/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + L RE L+ + + + D + Sbjct: 9 LDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLNEIVDVWSKYRQAEEDIETAESM 68 Query: 76 ALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + QE + I+ + D+N AYLEV AG GG E+ ++ Sbjct: 69 LSDPDFKDMAQEEIKENRALIEQLEGDLNILMIPKDPNDANAAYLEVRAGTGGDEAAIFS 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+++AE R ++ E L ++GE G K + G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSKYAESRGWRIEVLSENEGEHGGYKEVICRVDGDGVYGRLKFESGAHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P VD +EI+ +D RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 189 ATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDTYRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTGVVV+CQ+ERSQHKNKA+A +L ++L ++ + E + +G G + Sbjct: 249 VPTGVVVECQEERSQHKNKAKAMALLVSRLENA--KRAAQETATSEMRRDLVGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P + D R N+ +++GDL + + + Sbjct: 307 IRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 344 >gi|261209906|ref|ZP_05924207.1| peptide chain release factor 1 [Vibrio sp. RC341] gi|260841092|gb|EEX67617.1| peptide chain release factor 1 [Vibrio sp. RC341] Length = 362 Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 115/346 (33%), Positives = 181/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72 ++ V+R + DP + + + + L +E L+ + Q D + Sbjct: 9 LESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + E E I+ + Q L D + +LE+ AGAGG E+ Sbjct: 69 AQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AEK+ ++ E + + E G K + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P + ++ EI SD +IDT+R+SGAGGQHVNTTDSA+RI Sbjct: 189 VPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E KR I ++ + +G G Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAE--ISDTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ ++V++GD+ ++ + + Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTVYRLTEVMEGDMQSLIEPVIHEHQ 351 >gi|271500557|ref|YP_003333582.1| peptide chain release factor 1 [Dickeya dadantii Ech586] gi|270344112|gb|ACZ76877.1| peptide chain release factor 1 [Dickeya dadantii Ech586] Length = 361 Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 115/337 (34%), Positives = 174/337 (51%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + +P + ++ + L RE L + + Q D + Sbjct: 9 LEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFERWQQTQDDIETAELM 68 Query: 76 ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + E + + Q L D +LE+ AG GG E+ +A Sbjct: 69 LDDPEMRDLAQDELQAAKVASEDLEQQLQVLLLPKDPDDERGCFLEIRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R++K E + DGE G K + G AYG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESRRWKVEIMSASDGEHGGYKEVIAKVVGDGAYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P V ++ +I+ SD RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPEVPEAELPDINPSDLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLAARIRAAEMHKRQQE--EASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 IR+Y P V D R N+ + ++G LD ++ Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLDMLIQ 342 >gi|325264746|ref|ZP_08131475.1| peptide chain release factor 2 [Clostridium sp. D5] gi|324030038|gb|EGB91324.1| peptide chain release factor 2 [Clostridium sp. D5] Length = 310 Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 158/309 (51%), Positives = 221/309 (71%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ + L ++ I+++ D +L+E++ EE D + + L R + E E + + Sbjct: 1 MQHLKALQESVKQIEQLYADHEDIGLLIEMSEEEPDDETIGGIEEELDRFEEEFEELRIQ 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LL+GE DS+ A + +HAGAGGTES DWANML RMY+RWAEK+ F E L+ DG+ AGI Sbjct: 61 TLLTGEYDSSSAIVTLHAGAGGTESCDWANMLYRMYSRWAEKKGFSLEVLDYLDGDVAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K T ++G NAYG+L+ E+GVHRLVRISP+++ +R TSF+S V P ++D+I+IEI+E Sbjct: 121 KGVTFEVEGENAYGYLRSEKGVHRLVRISPFNAAGKRQTSFASCDVIPDIEDNIDIEINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 + RIDTYR+ GAGGQHVN T SAVRITH+PTG+VVQCQ ERSQH NK +A ML+AKLY Sbjct: 181 EELRIDTYRSGGAGGQHVNKTSSAVRITHLPTGIVVQCQNERSQHMNKDKAMQMLKAKLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 L+ Q++ + + EIG+G QIRSYV+QPY +VKD RTN+E ++ + V+DG+LD Sbjct: 241 LLKQQEQADKVSGIRGEVKEIGFGSQIRSYVMQPYTLVKDHRTNMEISNVNGVMDGNLDP 300 Query: 346 FMKATLAIK 354 F+ A L++K Sbjct: 301 FINAYLSMK 309 >gi|269961569|ref|ZP_06175931.1| Peptide chain release factor 1 [Vibrio harveyi 1DA3] gi|269833610|gb|EEZ87707.1| Peptide chain release factor 1 [Vibrio harveyi 1DA3] Length = 362 Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 116/339 (34%), Positives = 182/339 (53%), Gaps = 9/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R + DP + N + + L +E L+ + + Q D + ++ Sbjct: 9 LETLVERYEEVQHLLGDPDVIGNQDKFRALSKEYSQLEEVTNCFQAYQQAQDDLIAAEDM 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 A E+D+ + I+ + Q L D + +LE+ AGAGG E+ Sbjct: 69 ANEDDEEMREMAQEEIKEAKDAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AEKR ++ E + ++ E G K + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RI Sbjct: 189 VPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG VV+CQ ERSQHKNKA+A +L A++ + E ++R + ++ + +G G Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEQERRAAE--VSDTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +IR+Y P V D R N+ ++V++GDL + Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTIYRLNEVMEGDLQSLID 344 >gi|120436153|ref|YP_861839.1| peptide chain release factor 2 [Gramella forsetii KT0803] gi|117578303|emb|CAL66772.1| peptide chain release factor 2 [Gramella forsetii KT0803] Length = 333 Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 147/327 (44%), Positives = 223/327 (68%), Gaps = 2/327 (0%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 KT P W + +A+ +M+E + + ++ + + D ++ + E++ + Sbjct: 2 EEKTFAPDFWDDPKKAEQIMKEVNAEKSWVGDYEKAETLVEDLEVIYDFYKEDEATAEDV 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 + ++ +E +F+++LS E DS A L++ AGAGGTES DWA ML+RMY WAE Sbjct: 62 QQRNDKAV--ELIEDLEFKNMLSEEGDSMSAVLQITAGAGGTESCDWAEMLMRMYLMWAE 119 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 KRK+K L G+ AGIK+ TL I+G A+GWLKGE GVHRLVRISP+DSN++RHTSF Sbjct: 120 KRKYKIRELNYQAGDVAGIKTVTLEIEGEYAFGWLKGENGVHRLVRISPFDSNAKRHTSF 179 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S ++YP+VDDSIEI+I+ SD +T R+SGAGGQ+VN ++AVR+ H PTG+V++ + Sbjct: 180 ASAYIYPLVDDSIEIDINPSDLSWETMRSSGAGGQNVNKVETAVRLRHEPTGIVIENSET 239 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQ +NK +A +L+++L+E+ELQK++E E SK +I WG QIR+YV+ PY++VKD+ Sbjct: 240 RSQLENKNKAMQLLKSQLFEIELQKKQEQRREIEDSKMKIEWGSQIRNYVMHPYKLVKDV 299 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAI 353 RT E + DV++G++D F+K+ L + Sbjct: 300 RTAEETGNVDDVMNGNIDAFLKSFLMM 326 >gi|120555185|ref|YP_959536.1| peptide chain release factor 2 [Marinobacter aquaeolei VT8] gi|120325034|gb|ABM19349.1| bacterial peptide chain release factor 2 (bRF-2) [Marinobacter aquaeolei VT8] Length = 310 Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 175/308 (56%), Positives = 228/308 (74%), Gaps = 1/308 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 +ER L+ + I + + L D LL++A+EEDD +QE +L+ + E+E +F Sbjct: 2 GKERSDLELIVKTIDNLTNGLADAESLLDMAVEEDDEGTVQEIEADLENLDKELEKLEFR 61 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 + SGE D+N+AYL++ AG+GGTE+QDW NMLLRMY RWAE+R FK E +E+ +GE AGI Sbjct: 62 RMFSGEMDANNAYLDIQAGSGGTEAQDWGNMLLRMYLRWAERRGFKAEIVELQEGEVAGI 121 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I+G AYGWL+ E GVHRLVR SP+DS +RRHTSFSS++V P VDDS EIEI+ Sbjct: 122 KSATIHIQGDYAYGWLRTETGVHRLVRKSPFDSGNRRHTSFSSVFVSPEVDDSFEIEINP 181 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D R+D YRASGAGGQHVN T+SAVR+TH PTG+VV CQ RSQH+NK QA L+AKL+ Sbjct: 182 ADLRVDVYRASGAGGQHVNRTESAVRLTHNPTGIVVACQAGRSQHQNKDQAMKQLKAKLF 241 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ELE+QKR E E SK++IGWG QIRSYVL +KDLRT +E ++ VLDGD+D Sbjct: 242 ELEMQKRNEEKQKAEDSKSDIGWGSQIRSYVLDD-SRIKDLRTKVETSNTQSVLDGDIDK 300 Query: 346 FMKATLAI 353 F++A+L + Sbjct: 301 FIEASLKM 308 >gi|203287543|ref|YP_002222558.1| peptide chain release factor RF-2 [Borrelia recurrentis A1] gi|201084763|gb|ACH94337.1| peptide chain release factor RF-2 [Borrelia recurrentis A1] Length = 347 Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 143/348 (41%), Positives = 211/348 (60%), Gaps = 4/348 (1%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + GG FD D +L + + + W + A+ +++ + L I K + +L Sbjct: 1 MKMYGGSFDSDKIKIQLQKYEKQINNENFWNDNKRAQEILKNQNILKTKIEPWKNLICQL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D L + ++ +++ + ++ S + D N A+L +H+GAG Sbjct: 61 KDLREL---CKIAESEDDKAILERDVNKLREQYKHILTLSYFKEDIDINSAFLTIHSGAG 117 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+ DW NML R Y R++E+R +K E +++ + E GIKS T+ IKG AYG+LK E G Sbjct: 118 GTEACDWVNMLYRTYLRYSERRGYKIELIDLLESE-GGIKSVTIEIKGKYAYGFLKSEVG 176 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRLVRISP+D+ +RHTSF+S+++ PV+DD IEI I D R+DTYRASGAGGQHVN T Sbjct: 177 IHRLVRISPFDAAKKRHTSFASVFIDPVIDDKIEIIIKSEDIRVDTYRASGAGGQHVNKT 236 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVRITH+ TG+V Q Q +RSQH+NK A +L++KLYE ++ + + K +I Sbjct: 237 SSAVRITHLKTGIVTQSQTDRSQHRNKELAMKVLKSKLYEHYKTLEQQKSKSKQQEKKDI 296 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSY+ QPY +VKD RT E + V+DG++D+F++ L K Sbjct: 297 SWGNQIRSYIFQPYTLVKDHRTKFENPNIMSVMDGNIDNFIEEYLKWK 344 >gi|91228927|ref|ZP_01262825.1| peptide chain release factor 1 [Vibrio alginolyticus 12G01] gi|269965455|ref|ZP_06179574.1| Peptide chain release factor 1 [Vibrio alginolyticus 40B] gi|91187510|gb|EAS73844.1| peptide chain release factor 1 [Vibrio alginolyticus 12G01] gi|269829934|gb|EEZ84164.1| Peptide chain release factor 1 [Vibrio alginolyticus 40B] Length = 362 Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats. Identities = 117/346 (33%), Positives = 180/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72 + V+R + DP + N + + L RE L+ + Q D + Sbjct: 9 LETLVERYEEVQHLLGDPDVIGNQDKFRALSREYSQLEEVTKCFQAYQQAQEDLVAAEEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 EE +E + I+ + Q L D + +LE+ AGAGG E+ Sbjct: 69 ANEDDEEMREMAQEEIKEAKATIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AEKR ++ E + ++ E G K + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RI Sbjct: 189 VPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG VV+CQ ERSQHKNKA+A +L A++ + E ++R + ++ + +G G Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAE--VSDTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ ++V++GDL + + + Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTIYRLNEVMEGDLQSLIDPVIQEHQ 351 >gi|312958850|ref|ZP_07773369.1| Peptide chain release factor 1 [Pseudomonas fluorescens WH6] gi|311286620|gb|EFQ65182.1| Peptide chain release factor 1 [Pseudomonas fluorescens WH6] Length = 360 Score = 232 bits (591), Expect = 7e-59, Method: Composition-based stats. Identities = 114/346 (32%), Positives = 172/346 (49%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + + +E ++ ++ + D L Sbjct: 9 LDVLQDRFEELTALLGDGEVISDQAKFRAYSKEYAEVEPVVTTYGQWLKTHADLEGAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLE---VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + Q L D + +LE+ AG GG E+ Sbjct: 69 LKDSDPDMREMAVEEVREAKDKLIALEGDLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AE+R ++ E L ++GE G K ++G N YG LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGENVYGKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI+ +D R+DTYR+SGAGGQHVN TDSA+RI Sbjct: 189 VPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + Q I K +G G Sbjct: 249 THLPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAANAIASERKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y V D R N+ S ++L G +D ++ LA + Sbjct: 307 ERIRTYNFA-QGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLAEYQ 351 >gi|225165725|ref|ZP_03727521.1| peptide chain release factor 2 [Opitutaceae bacterium TAV2] gi|224800034|gb|EEG18467.1| peptide chain release factor 2 [Opitutaceae bacterium TAV2] Length = 341 Score = 232 bits (591), Expect = 7e-59, Method: Composition-based stats. Identities = 155/327 (47%), Positives = 206/327 (62%), Gaps = 3/327 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 W N A+ + + L A+ + + ++ D L EL + + Sbjct: 1 MGASDFWDNNERAQKHINKVNGLKRAVLPLVAFRKKVDDLDALNELIEAGSPAEQEEFGA 60 Query: 90 DNLQRIKLEV---EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 + + + + + + L+G+ D N+A + AGAGGTES DWA+ML RMYTRWAE Sbjct: 61 ELTAQAAAMIGELDDLEINAFLTGQFDRNNAIFSIQAGAGGTESNDWADMLFRMYTRWAE 120 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 +R F E ++ G++AGI ATLLIKG NAYG+ K E+GVHRLVRISP+DSN RRHTSF Sbjct: 121 RRGFTVEVQDVQPGDQAGISKATLLIKGENAYGYCKAERGVHRLVRISPFDSNQRRHTSF 180 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 ++ V ++D I+IEI E + R+D YR+SG GGQ VNTTDSAVR+THIPTG+VV CQ E Sbjct: 181 CAVDVIAEINDEIKIEIPEDEIRVDVYRSSGKGGQGVNTTDSAVRLTHIPTGLVVVCQNE 240 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQ KNKA A ++L+A+LYE + ++ + K EIGWG QIRSYVLQPYQMVKDL Sbjct: 241 RSQIKNKASAMSILKARLYEKKQDEQRAEMDKFYGEKGEIGWGAQIRSYVLQPYQMVKDL 300 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAI 353 RT + + VLDGD+D F+ L Sbjct: 301 RTGVNTSDTQGVLDGDIDRFINGWLRA 327 >gi|126695538|ref|YP_001090424.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT 9301] gi|126542581|gb|ABO16823.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT 9301] Length = 354 Score = 232 bits (591), Expect = 7e-59, Method: Composition-based stats. Identities = 139/344 (40%), Positives = 204/344 (59%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 L +FD + L + P W+N EAK M + + + + + + D Sbjct: 2 LRIVFDVPRLKAKRRELEQISAQPEFWENQEEAKKQMLILDDVKAQLELLDKWKTFISDA 61 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LEL E + ++ E+ L++++ ++ +FE LL GE D A + ++AGAGGT+ Sbjct: 62 NASLELYSLEPEEEMILESKQGLKKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGGTD 121 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDW +LLRMY+RWA+ + E+ GEEAGIKS T I G AYG+L+ E+G HR Sbjct: 122 AQDWVEILLRMYSRWADNNQMSLIINELSQGEEAGIKSVTFEIDGKYAYGYLQHEKGTHR 181 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+++N +R TSF+ + V P +DD+I ++I E D I T R+ GAGGQ+VN ++A Sbjct: 182 LVRISPFNANGKRQTSFAGVEVMPKLDDNISLDIPEKDLEITTSRSGGAGGQNVNKVETA 241 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRI H+P+G+ V+C QERSQ +NK +A +L++KL + ++R + E WG Sbjct: 242 VRIVHLPSGISVRCTQERSQLQNKEKAMLLLKSKLLVIAKEQRAAEVADIKGDIVEAAWG 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIR+YV PYQMVKDLRT E VLDG L+ F+ L + Sbjct: 302 NQIRNYVFHPYQMVKDLRTMQETNELDSVLDGGLEPFIHELLRM 345 >gi|152997601|ref|YP_001342436.1| peptide chain release factor 1 [Marinomonas sp. MWYL1] gi|189039978|sp|A6W1C2|RF1_MARMS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|150838525|gb|ABR72501.1| peptide chain release factor 1 [Marinomonas sp. MWYL1] Length = 362 Score = 232 bits (591), Expect = 7e-59, Method: Composition-based stats. Identities = 116/343 (33%), Positives = 175/343 (51%), Gaps = 9/343 (2%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 ++ R L + + + +E L+ + E Q + Sbjct: 7 LKLESLSDRYDELAALLGVAEVIMDQDLFRAYSKEYAELEPVVKCFNEFQQIDENIAEAE 66 Query: 74 ELALEEDDCSILQETSDNLQ---RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + D + + + Q L DS + +LEV AG GG E+ Sbjct: 67 LMMTDADPDIKEMGVEEYKAGLAQKEELQLVLQKLLLPKDPNDSRNVFLEVRAGTGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 ++ L RMY+R+AE +++K E + DGE G K I G AY LK E G HR+ Sbjct: 127 SIFSGDLFRMYSRYAETQRWKVEIVSASDGEHGGYKEVIARIVGEGAYSKLKFESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS ++ V P +D+ +I I++SD RIDT+RASGAGGQHVN TDSA+ Sbjct: 187 QRVPATESQGRIHTSACTVAVMPEMDEVDDIIINKSDLRIDTFRASGAGGQHVNKTDSAI 246 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+THIPTGVVV+CQ+ERSQHKN+A+A ++L ++L EL+K + E+ K+ +G G Sbjct: 247 RLTHIPTGVVVECQEERSQHKNRAKAMSLLASRLQAAELEK--AASEQSETRKSLVGSGD 304 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R N+ +++ G+LD + Sbjct: 305 RSERIRTYNY-PQGRVTDHRINLTLYKLDEIVAGELDSLINPL 346 >gi|330811719|ref|YP_004356181.1| peptide chain release factor 1 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379827|gb|AEA71177.1| Peptide chain release factor 1 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 360 Score = 232 bits (591), Expect = 8e-59, Method: Composition-based stats. Identities = 115/346 (33%), Positives = 174/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + + +E ++ ++ K++ D L Sbjct: 9 LDILQDRFEELTALLGDGEVISDQNKFRTYSKEYAEVEPIVATYKQLLKVQGDLEGAQAL 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + ++ Q L D + +LE+ AG GG E+ Sbjct: 69 LKDSDPDMREMAVEEVREAKDQLVELESSLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AE+R ++ E L ++GE G K ++G N YG LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI+ +D R+DTYR+SGAGGQHVN TDSA+RI Sbjct: 189 VPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+P+G+VV+CQ+ERSQHKN+A+A L AKL + Q I K +G G Sbjct: 249 THLPSGIVVECQEERSQHKNRARAMAWLSAKLND--QQTSAAANAIASERKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y V D R N+ S ++L G +D ++ LA + Sbjct: 307 ERIRTYNFA-QGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLAEYQ 351 >gi|317401193|gb|EFV81839.1| peptide chain release factor 1 [Achromobacter xylosoxidans C54] Length = 360 Score = 232 bits (591), Expect = 8e-59, Method: Composition-based stats. Identities = 116/344 (33%), Positives = 181/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ RL ++ +P ++ + L RER L+ + D E+ Sbjct: 9 LEHLCHRLIEVDALLAEPETASDMDRFRKLSRERAELEPVVEAFTAFVRGEEDLATAQEM 68 Query: 76 ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + ++ ++ + + + Q L D +LE+ AG GG ES ++ Sbjct: 69 LADPELKAMAEDEIKSGRVKLESLEAALQLLLLPRDPNDGRSVFLEIRAGTGGDESALFS 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE+R ++ E + E G K I+G AYG LK E G HR+ R+ Sbjct: 129 GDLLRMYTRYAEQRGWRVELMSESPSELGGYKEVIARIEGDGAYGRLKFESGAHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ + D+ EI I+ SD RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 189 ATEAQGRIHTSACTVAIMAEADEMSEIVINPSDLRIDTFRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQH+NK +A +L A+L + E ++R+ + K+ IG G + Sbjct: 249 LPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKETRERQ--SKEAAERKSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +++GDL++ A +A + Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKLQQIMEGDLEELTGALIAEHQ 349 >gi|282857117|ref|ZP_06266363.1| peptide chain release factor 1 [Pyramidobacter piscolens W5455] gi|282585052|gb|EFB90374.1| peptide chain release factor 1 [Pyramidobacter piscolens W5455] Length = 358 Score = 232 bits (591), Expect = 8e-59, Method: Composition-based stats. Identities = 124/361 (34%), Positives = 184/361 (50%), Gaps = 19/361 (5%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 M L +L L + + L K DP + ++ E + L R+ L+ + + Sbjct: 1 MNLEPKLRELEAI---------YAELEKKMADPAVVSDIKEMQNLGRKHSELEEVVGDYR 51 Query: 61 EIQDRLCDNLILLELALEEDDCSI---LQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117 + + EL D E + + E + L D D Sbjct: 52 RYRQVRDEIAEAKELVGGGDHELAELAKMELEEKEPLLGKIEEQLRVALLPKDPNDEKDV 111 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 +E+ AG GG E+ +A L RMY+R+AE+ +K E ++ ++ E G K L I G Sbjct: 112 IMEIRAGTGGDEASLFAADLFRMYSRYAEREGWKLEIVDENETEVGGYKEIVLQIHGRGV 171 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 Y LK E GVHR+ R+ ++ R HTS +++ V P V D I+IEI D +IDTYR+SG Sbjct: 172 YSQLKYESGVHRVQRVPATEAGGRIHTSAATVVVMP-VADDIDIEIRPEDLKIDTYRSSG 230 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 AGGQHVN TDSAVRITH+PTG+VV CQ ERSQ KN+A+A +L+ +LY+ E++K+ + Sbjct: 231 AGGQHVNMTDSAVRITHLPTGLVVTCQDERSQIKNRAKALQVLKTRLYDAEVEKQR--SA 288 Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K IG G +IR+Y P V D R + ++DGDL + +KA + + Sbjct: 289 ESAERKGMIGSGDRSERIRTYNY-PQNRVTDHRIGLTLYKLEYMMDGDLYEMIKALVMAE 347 Query: 355 K 355 + Sbjct: 348 Q 348 >gi|254479978|ref|ZP_05093226.1| peptide chain release factor 2 [marine gamma proteobacterium HTCC2148] gi|214039540|gb|EEB80199.1| peptide chain release factor 2 [marine gamma proteobacterium HTCC2148] Length = 310 Score = 232 bits (590), Expect = 8e-59, Method: Composition-based stats. Identities = 163/307 (53%), Positives = 216/307 (70%), Gaps = 1/307 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 RER L+ + I++++ D LLE+A EDD L E + + ++E +F Sbjct: 2 GRERSSLETIVLTIEKLEGGATDAADLLEMAAAEDDQDTLTEVISEIDALVAQLERLEFR 61 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 + GE D+N+A+L++ +G+GGTE+QDWA M+LRMY RW E + FKT+ +E G+ AGI Sbjct: 62 RMFDGEMDANNAFLDIQSGSGGTEAQDWAEMMLRMYLRWGEAKGFKTQLMEASAGDVAGI 121 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ +G A+GWL+ E GVHRLVR SP+DS +RRHTSFSS++V P +DD+IEIEI+ Sbjct: 122 KSATIKFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSSVFVSPEIDDNIEIEINP 181 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D R+DTYRASGAGGQHVN TDSAVR+TH PTG+ VQCQ ERSQH+N+ A +LRAKLY Sbjct: 182 ADLRVDTYRASGAGGQHVNKTDSAVRLTHNPTGIAVQCQTERSQHQNRDNAMKLLRAKLY 241 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+E+ KR E E K +IGWG QIRSYVL +KDLRT +E + VLDG LD Sbjct: 242 EMEMLKRNEEKQAMEDGKADIGWGSQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGSLDQ 300 Query: 346 FMKATLA 352 F++A+L Sbjct: 301 FIEASLK 307 >gi|154482489|ref|ZP_02024937.1| hypothetical protein EUBVEN_00156 [Eubacterium ventriosum ATCC 27560] gi|149736690|gb|EDM52576.1| hypothetical protein EUBVEN_00156 [Eubacterium ventriosum ATCC 27560] Length = 356 Score = 232 bits (590), Expect = 8e-59, Method: Composition-based stats. Identities = 120/351 (34%), Positives = 190/351 (54%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D ++R + + DP++ + + LM+E+ L + K ++ Sbjct: 1 MFDKLDGILERYDEIMEQLNDPNVVSDQNNFRKLMKEQSDLAPIVEAYKAYKEAKQTVED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L + EE D + + + + K + E + L E D + +E+ GAGG Sbjct: 61 SLMILDEESDEEMRELAKEEMNEAKEQITELEEKLKILLLPKDENDDKNVVVEIRGGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY +AE + +KTE + +++ G K +I G AY LK E GV Sbjct: 121 DEAALFAAELYRMYCMYAETQHWKTEMISVNENGLGGFKEVVFMINGQGAYSKLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +S R HTS +++ + P + +++EI +DCR D +RASG GGQ VNTTD Sbjct: 181 HRVQRIPVTESGGRIHTSTATVAIMP-EAEEVDVEIDMNDCRFDVFRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V+ CQ E+SQ KNK +A +LRA+LYELE QK+++ E+ +++IG Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRARLYELECQKKQD--AESEARRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R ++L+G L++ + +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKFTSHRLDEILNGHLEEIIDNCIAADQ 347 >gi|330502033|ref|YP_004378902.1| peptide chain release factor 1 [Pseudomonas mendocina NK-01] gi|328916319|gb|AEB57150.1| peptide chain release factor 1 [Pseudomonas mendocina NK-01] Length = 360 Score = 232 bits (590), Expect = 8e-59, Method: Composition-based stats. Identities = 122/346 (35%), Positives = 179/346 (51%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 DN R L D + + + +E ++ I+ +E++ D L Sbjct: 9 LDNLSDRFEELTALLGDAEVISKQSQFRAYSKEYAEIEPVIATFRELRKVQGDLEGAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLE---VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + Q + + Q L D + YLE+ AG GG E+ Sbjct: 69 LKDSDPDLREMAELEVDQAKEALVGLEDKLQRMLLPKDPNDGRNVYLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AEK+ ++ E L ++GE G K ++G N Y LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAEKQGWRVEVLSANEGEHGGFKEVIARVEGDNVYAKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI+ +D R+DTYR+SGAGGQHVNTTDSA+RI Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG VV+CQ+ERSQHKN+A+A L AKL + Q I E+ K +G G Sbjct: 249 THIPTGTVVECQEERSQHKNRAKAMAWLAAKLQD--QQDAAAHKEISETRKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ S ++V+ G ++ ++ LA + Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYSLNEVIAGGVEAVIEPLLAEYQ 351 >gi|189485333|ref|YP_001956274.1| peptide chain release factor 2 [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287292|dbj|BAG13813.1| peptide chain release factor 2 [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 329 Score = 232 bits (590), Expect = 8e-59, Method: Composition-based stats. Identities = 162/323 (50%), Positives = 218/323 (67%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 +P W + +AK M E L N ++ + D + L LA +E+D +L++ D Sbjct: 2 EPDFWNDQNKAKKTMAELDDLKNVCRLWYDMSREVKDLIDLSMLATDENDEKLLKDVEDG 61 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 ++++ E+ + + L GE D N+A + +HAGAGGTES DWA +LLRMY+RWAE + FK Sbjct: 62 SKKLEKELSVFEVRTKLGGEHDKNNAIISIHAGAGGTESCDWAQILLRMYSRWAEDKGFK 121 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 TE ++ DG+EAGIK+ T++I+G AYG+L+ E GVHRLVRISP+DSN RRHTSFSS+ V Sbjct: 122 TEVVDSLDGDEAGIKNITMIIRGEYAYGFLQSEIGVHRLVRISPFDSNKRRHTSFSSVDV 181 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P V+DSI+I I + D RIDTYRASGAGGQH+N TDSAVRITH+ T + VQ Q +RSQ K Sbjct: 182 IPEVEDSIDIIIEDKDIRIDTYRASGAGGQHINKTDSAVRITHLATEITVQSQNDRSQIK 241 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ A +L+A+LYELE +K+ + K I W QIRSYV PYQ+VKD RT + Sbjct: 242 NRTTAMKLLKARLYELEQEKQRASYEKHYNEKGAIEWSSQIRSYVFMPYQLVKDHRTGYK 301 Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354 V+DGD+DDF+ A L+ K Sbjct: 302 TLRMDLVMDGDIDDFISAYLSWK 324 >gi|323359619|ref|YP_004226015.1| protein chain release factor B [Microbacterium testaceum StLB037] gi|323275990|dbj|BAJ76135.1| protein chain release factor B [Microbacterium testaceum StLB037] Length = 370 Score = 232 bits (590), Expect = 8e-59, Method: Composition-based stats. Identities = 144/353 (40%), Positives = 207/353 (58%), Gaps = 1/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + D D + L+ + P LW +V A+ + H + I EI Sbjct: 13 LRSTFADIQAVVDVDALKADIDRLSEEAGAPDLWDDVDNAQKVTSRLSHRQAELKRITEI 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D +L+ELA+E DD E L +K + + ++LL GE DS A + + Sbjct: 73 EQRLDDLEVLVELAIEMDDEDSADEARRELASLKDVIGQLEVQTLLDGEYDSRSAVVTIR 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGG ++ D+A MLLRMY RWAE+ K+ + ++ E AGIKSAT + P AYG L Sbjct: 133 SGAGGDDATDFAEMLLRMYLRWAERHKYPVKVMDTSYAEGAGIKSATFEVDVPYAYGTLS 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HRL RISP+ +R TSF+++ V PV+++++E+E+ E D R+D +R+SG GGQ Sbjct: 193 VEAGTHRLARISPFGGADKRQTSFAAVEVIPVMEEAVEVEVPEGDIRVDVFRSSGPGGQS 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITHIPTG+VV Q E+SQ +N+A A +L+ +L L+ ++ + Sbjct: 253 VNTTDSAVRITHIPTGLVVSMQNEKSQIQNRAAAMRVLQTRLLLLKREEEAAKKKELAGT 312 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 T WG Q+RSY L Q+VKDLRT E +P+ V DGDLD + A + +K Sbjct: 313 IT-ASWGDQMRSYFLYGQQLVKDLRTGYEVGNPAVVFDGDLDGLIAAGIRWRK 364 >gi|330445230|ref|ZP_08308882.1| peptide chain release factor 1 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489421|dbj|GAA03379.1| peptide chain release factor 1 [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 362 Score = 232 bits (590), Expect = 9e-59, Method: Composition-based stats. Identities = 115/346 (33%), Positives = 181/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72 + V+R + DP + + + L +E L+ + Q D + Sbjct: 9 LETLVERYEEVQHLLGDPDVLADQNRFRALSKEYSQLEEVTKCFQAYQQAKEDLVAAEEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + E +E + I+ + Q L D + ++E+ AGAGG E+ Sbjct: 69 AQEDDAEMREMAQEEIKEAKAEIERLADELQVLLLPKDPNDDRNCFVEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AE+R ++ E + + E+ G K + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSKYAERRGWRVEVISENRAEQGGYKEMIAKVNGDGAYGILKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P V ++ EI+ D +IDT+R+SGAGGQHVNTTDSA+RI Sbjct: 189 VPATESQGRVHTSACTVAVLPEVPEAEIPEINTGDLKIDTFRSSGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR + + +G G Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRHAE--EASTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + ++V++GDLD ++ L + Sbjct: 307 DRIRTYNY-PQGRVSDHRITLTLYRLNEVMEGDLDALIQPVLQEHQ 351 >gi|254000219|ref|YP_003052282.1| peptide chain release factor 1 [Methylovorus sp. SIP3-4] gi|253986898|gb|ACT51755.1| peptide chain release factor 1 [Methylovorus sp. SIP3-4] Length = 360 Score = 232 bits (590), Expect = 9e-59, Method: Composition-based stats. Identities = 113/339 (33%), Positives = 172/339 (50%), Gaps = 7/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +RL LN ++ + + RE + + + + D + Sbjct: 9 LATLSERLDELNRLLSSEDATSDMDNYRKISREHAEITPIVEQYRAYEQCENDLKEAHAM 68 Query: 76 ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE + + + Q L D + +LE+ AG GG ES +A Sbjct: 69 LADPEMKAFAQEEIEAGKARLEEIAMALQKLLLPKDPNDERNIFLEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE++++K E + + E G K I+G AY LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAERQRWKVEVVSASESEVGGYKEIIAKIEGFGAYSKLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P VD+ ++ IS +D RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 189 ETETQGRIHTSACTVAVLPEVDEVSDVTISPADIRIDTFRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 PTG+VV+CQ RSQH NKAQA +L A++ Q E+ + I ++ IG G + Sbjct: 249 FPTGIVVECQDGRSQHSNKAQAMQVLAARI--KAKQVNEQQSKIASERRSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P + D R N+ + +GD+D+ + A Sbjct: 307 IRTYNY-PQGRITDHRINLTLYKIDAITEGDMDELINAL 344 >gi|329964588|ref|ZP_08301642.1| putative peptide chain release factor 2 [Bacteroides fluxus YIT 12057] gi|328524988|gb|EGF52040.1| putative peptide chain release factor 2 [Bacteroides fluxus YIT 12057] Length = 371 Score = 232 bits (590), Expect = 9e-59, Method: Composition-based stats. Identities = 133/358 (37%), Positives = 207/358 (57%), Gaps = 11/358 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L D + ++ +T+ P W + A+ M++ + L IS E+ Sbjct: 10 IKERAEALNRYLDIEGKKIQVEEEQLRTQAPGFWDDQKAAEAQMKKVKGLQQWISGYNEV 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + L +D+ +E + + VE + +++L EAD D L+++ Sbjct: 70 KTLAEELQ--LSFDFYKDELVTEEEVDEAYVKASAAVEALELKNMLREEADQMDCVLKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDWA+ML+RMY R+AE +K + +G+EAGIK+ T+ I G AYG+LK Sbjct: 128 SGAGGTESQDWASMLMRMYLRYAETYGYKAVISNLQEGDEAGIKTCTIEISGDYAYGYLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVR+SPY++ +R TSF+S++V P+VDD+IE+ I+ ++ DT+R+SGAGGQ+ Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVNINVANISWDTFRSSGAGGQN 247 Query: 243 VNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 VN +S VR+ + ++++ + R Q KN+ A LR+ LY+ ELQ R Sbjct: 248 VNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMA 307 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ K +I WG QIRSYV + VKD RTN + + + V+DG +D F+KA L Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGKIDGFIKAYLM 364 >gi|163843187|ref|YP_001627591.1| peptide chain release factor 2 [Brucella suis ATCC 23445] gi|163673910|gb|ABY38021.1| peptide chain release factor 2 [Brucella suis ATCC 23445] Length = 321 Score = 232 bits (590), Expect = 9e-59, Method: Composition-based stats. Identities = 203/309 (65%), Positives = 257/309 (83%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ L+++I+ I ++ L D++ L+ + EE D SI++ ++ +K E++ +Q + Sbjct: 1 MRERQQLEDSINGINHLKQMLNDSVELIAMGEEEGDKSIVEGAEKTIRDLKDEIDRRQID 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LLSGEAD+ND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+ K E +E+H+GEEAGI Sbjct: 61 MLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+L+KG N+YG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+IE++++E Sbjct: 121 KSATILVKGQNSYGMLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE + ++KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG + Sbjct: 241 EEELKKREEATDAANATKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTP 300 Query: 346 FMKATLAIK 354 FM+A LA + Sbjct: 301 FMEAALAHR 309 >gi|262404524|ref|ZP_06081079.1| peptide chain release factor 1 [Vibrio sp. RC586] gi|262349556|gb|EEY98694.1| peptide chain release factor 1 [Vibrio sp. RC586] Length = 362 Score = 232 bits (590), Expect = 9e-59, Method: Composition-based stats. Identities = 115/346 (33%), Positives = 182/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72 ++ V+R + DP + + + + L +E L+ + Q D + Sbjct: 9 LESLVERYEEVQHLLGDPAVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + E E + I+ + Q L D + +LE+ AGAGG E+ Sbjct: 69 AQEDDAEMREMAQDEIKAAKEAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AEK+ ++ E + + E G K + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P + ++ EI SD +IDT+R+SGAGGQHVNTTDSA+RI Sbjct: 189 VPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E KR I ++ + +G G Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAE--ISDTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ ++V++GD+ ++ + + Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTVYRLTEVMEGDMQSLIEPVIHEHQ 351 >gi|262038076|ref|ZP_06011481.1| peptide chain release factor 1 [Leptotrichia goodfellowii F0264] gi|261747896|gb|EEY35330.1| peptide chain release factor 1 [Leptotrichia goodfellowii F0264] Length = 359 Score = 232 bits (590), Expect = 9e-59, Method: Composition-based stats. Identities = 123/351 (35%), Positives = 187/351 (53%), Gaps = 11/351 (3%) Query: 13 LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL- 70 +F D+ V + L DP + + + + +D + + R + Sbjct: 1 MFQKLDDVVLKHEELTRLLMDPEVISDPKKIMEYNKALNSIDEVVKKYTYYKSRKEEMES 60 Query: 71 ---ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L E +L+E + I E + L D + +E+ AGAGG Sbjct: 61 LKEDLKAEKDPEMKEMMLEEIHTIEEEIPGLEEELKILLLPKDPNDDKNVIMEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RM+TR+AE+ ++KTE ++ + G+K T LIKG AY LK E GV Sbjct: 121 DEAALFAADVFRMFTRYAERNRWKTEIIDKSEIGVGGLKEVTFLIKGNGAYSRLKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +++ R HTS ++ V P ++D E+EI++SD +IDTYR+SGAGGQHVNTTD Sbjct: 181 HRVQRVPATEASGRIHTSTITVAVLPEIEDVNEVEINQSDLKIDTYRSSGAGGQHVNTTD 240 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VV Q RSQ KN+ A +L +KLYE+E +K+ + ++++G Sbjct: 241 SAVRITHLPTGLVVTSQDGRSQIKNREAAMKVLASKLYEMEYEKQRKEVE--SERRSQVG 298 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + VLDGDLD+ + A +A + Sbjct: 299 SGDRSEKIRTYNF-PQGRVTDHRIKLTLHRLEGVLDGDLDEMIDALIAYDQ 348 >gi|229826190|ref|ZP_04452259.1| hypothetical protein GCWU000182_01562 [Abiotrophia defectiva ATCC 49176] gi|229789060|gb|EEP25174.1| hypothetical protein GCWU000182_01562 [Abiotrophia defectiva ATCC 49176] Length = 357 Score = 232 bits (590), Expect = 9e-59, Method: Composition-based stats. Identities = 109/351 (31%), Positives = 177/351 (50%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + R + + + + + LM+E+ L + K + Sbjct: 1 MFESIETLAGRYKEVTDELASGMAAADPNKFRNLMKEQSDLQPIVEKYKAYKANNEQIED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127 L + EE D + + + L K V + E + D + +E+ AG GG Sbjct: 61 CLRMISEESDPELKELAREELAEAKAAVPEFEKELKVLLLPKDKNDDKNVIVEIRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A+ L RMY ++AE ++K E L ++ G K T LI G A+ LK E G Sbjct: 121 DEAAIFASELYRMYCKYAENNRWKPEILSFNENGLGGFKEVTFLINGKGAFSKLKYESGT 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +SN + TS +++ + P + +++ I +D + D +RASG GGQ VNTTD Sbjct: 181 HRVQRVPVTESNGKLQTSAATVAILP-EAEEVDVNIDPNDIKFDVFRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V+ CQ E+SQ KNK +A +LR++LYELE +K A + K+++G Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKAMKVLRSRLYELECEK--AHAEEAANRKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + V+ GDL + ++ + + Sbjct: 298 SGDRSEKIRTYNF-PQGRVTDHRIKFTTHNIDGVMGGDLTEIIENLIVADQ 347 >gi|303236882|ref|ZP_07323461.1| putative peptide chain release factor 2 [Prevotella disiens FB035-09AN] gi|302483050|gb|EFL46066.1| putative peptide chain release factor 2 [Prevotella disiens FB035-09AN] Length = 371 Score = 232 bits (590), Expect = 9e-59, Method: Composition-based stats. Identities = 118/356 (33%), Positives = 210/356 (58%), Gaps = 12/356 (3%) Query: 6 QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 +++ L + D +T+ P W++ A+ M++ + ++ I + ++ + Sbjct: 13 RVDALNHYLNIDKKKIEFEEEQLRTQAPDFWEDAERAQEQMKKVKGIEKWIKGYENVKTQ 72 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 + + + D+ ++ ++ ++E + ++L E D + +++++GA Sbjct: 73 ADELQLAFDFYK--DELVTEEDVDTAYAKVITDIENLELMNMLRQEEDPMECVMKINSGA 130 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PNAYGWLKGE 184 GGTESQDWA+ML+RMY R+ E+ +K +I +G+EAGIKS T+ +G A+G+LK E Sbjct: 131 GGTESQDWASMLMRMYMRYGEQHGYKVTIADIQEGDEAGIKSVTMKFEGGEYAFGFLKSE 190 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHRLVR+SP+++ +R TSF+S++V P++DD+IE+ + + DT+R+ GAGGQ+VN Sbjct: 191 NGVHRLVRVSPFNAQGKRMTSFASVFVSPLIDDTIEVFVDPARVSWDTFRSGGAGGQNVN 250 Query: 245 TTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 +S VR+ ++ ++++ + R Q KN+A+A +L+++LY+ ++KR E Sbjct: 251 KVESGVRLRYMYQDPDTGEEEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRMEAQ 310 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+SK +I WG QIRSYV + VKD RTN + + V+DG +D F+KA L Sbjct: 311 AKVEASKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKIDGFIKAYLM 365 >gi|167564255|ref|ZP_02357171.1| peptide chain release factor 1 [Burkholderia oklahomensis EO147] gi|167571406|ref|ZP_02364280.1| peptide chain release factor 1 [Burkholderia oklahomensis C6786] Length = 360 Score = 232 bits (590), Expect = 9e-59, Method: Composition-based stats. Identities = 115/346 (33%), Positives = 176/346 (50%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72 D RL+ LN ++ ++ + + L RE + + + + D L Sbjct: 9 LDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQEL 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L A D + D + ++E+ AG GG ES Sbjct: 69 LGDASMRDFAEDELRGARERMGRLAAELQTMLL--PKDPNDERNIFVEIRAGTGGDESAL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A LLRMY R+AE+++++ E + + G K + I G AY LK E G HR+ R Sbjct: 127 FAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+ Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ ++DGDLD+ + A ++ + Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVSEHQ 349 >gi|170696251|ref|ZP_02887383.1| peptide chain release factor 1 [Burkholderia graminis C4D1M] gi|170138811|gb|EDT07007.1| peptide chain release factor 1 [Burkholderia graminis C4D1M] Length = 360 Score = 232 bits (590), Expect = 9e-59, Method: Composition-based stats. Identities = 119/344 (34%), Positives = 181/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D RL+ LN + N+ + + L RE L + + + D EL Sbjct: 9 LDQLTTRLAELNDLLSREDITSNLDQYRKLTREHAELGPVVEQYALWRQAMHDAATAQEL 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + +E +R++ Q L D + +LE+ AG GG ES +A Sbjct: 69 LTDISMREFAEEEIRAARERMEQLGGELQKMLLPKDPNDDRNIFLEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE+ +++ E + + + G K + I G AY LK E G HR+ R+ Sbjct: 129 GDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G + Sbjct: 249 LPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QSHEQQAKEAATRKSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++DGDLD+ + A ++ + Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELISALVSEHQ 349 >gi|73542728|ref|YP_297248.1| peptide chain release factor 1 [Ralstonia eutropha JMP134] gi|119361585|sp|Q46WS9|RF1_RALEJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|72120141|gb|AAZ62404.1| bacterial peptide chain release factor 1 (bRF-1) [Ralstonia eutropha JMP134] Length = 360 Score = 232 bits (590), Expect = 9e-59, Method: Composition-based stats. Identities = 115/344 (33%), Positives = 176/344 (51%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +RL +N N+ + + L RE L + D L Sbjct: 9 LDQLAERLEEVNALLAREDATANIDQYRKLSREHAELSPVAEQYGFYRQAQDDLATAQAL 68 Query: 76 ALEEDDCSILQETS-DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +R++ Q L D + LE+ AG GG ES +A Sbjct: 69 LDDPEMKDFAADEIASARERLESLEGSLQKLLLPKDPNDDRNLILEIRAGTGGEESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE+++++ E + + + G K + I G A+ LK E G HR+ R+ Sbjct: 129 GDLLRMYTRFAERQRWQVEIMSESESDLGGYKEVIVRIAGDAAFSRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ ++EI+ SD RIDT+RASGAGGQHVN TDSAVR+TH Sbjct: 189 ATEAQGRIHTSACTVAVMPEADEVGDVEINPSDLRIDTFRASGAGGQHVNKTDSAVRLTH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQH+NK +A +L A++ + ++ R A + + IG G + Sbjct: 249 LPTGIVVECQDDRSQHRNKDKAMKVLAARIKDQQM--RAAQAKEASTRRNLIGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ ++DGDL++ + A A + Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKIDMIMDGDLEELVSALAAEHQ 349 >gi|300313560|ref|YP_003777652.1| peptide chain release factor 1 [Herbaspirillum seropedicae SmR1] gi|300076345|gb|ADJ65744.1| peptide chain release factor 1 (RF-1) protein [Herbaspirillum seropedicae SmR1] Length = 359 Score = 232 bits (590), Expect = 9e-59, Method: Composition-based stats. Identities = 125/344 (36%), Positives = 185/344 (53%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +RL LN+ ++ + + RE L ++ E D EL Sbjct: 9 LDQLAERLEELNSLLAQEDATASMDNFRKMTREHAELGPLVALYHEYVQAAEDIRTAQEL 68 Query: 76 ALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + QE D R++ Q L D + +LE+ AG GG ES +A Sbjct: 69 LADPDMKAFAQEEIDGAKARMEGLELDLQKMLLPKDPNDERNIFLEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE+++++ E + + E G K I G AY LK E G HR+ R+ Sbjct: 129 GDLLRMYTRYAERQRWQVEIVSASESELGGYKEVIARIVGLGAYSRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ ++EI+ +D RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 189 ATETQGRIHTSACTVAVMPEADEVGDVEINPADIRIDTYRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQHKNKAQA +L A++ +++L R++ + + K+ IG G + Sbjct: 249 LPTGIVVECQDDRSQHKNKAQAMKVLAARIKDVQL--RQQQSEEAATRKSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++DGDLD+ A + + Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYKLDFIMDGDLDELTNALITEHQ 349 >gi|291617195|ref|YP_003519937.1| PrfA [Pantoea ananatis LMG 20103] gi|291152225|gb|ADD76809.1| PrfA [Pantoea ananatis LMG 20103] gi|327393650|dbj|BAK11072.1| peptide chain release factor 1 PrfA [Pantoea ananatis AJ13355] Length = 360 Score = 232 bits (590), Expect = 9e-59, Method: Composition-based stats. Identities = 115/337 (34%), Positives = 178/337 (52%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + ++ Q D L Sbjct: 9 LEALQERHEEVEAMLGDAGVIADQDRFRALSREYAQLTDVTRCFRDWQQNQDDIETAKML 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE ++ + + Q L D D ++EV AG GG E+ +A Sbjct: 69 LDDPEMRDMAQEELLEAREKSESLEQQLQLLLLPKDPDDERDCFVEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + ++GE G K + G AYG K E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESRRWRVEIVSANEGEHGGYKEVIARVMGEGAYGRFKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ EI+ SD +IDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVMPELPEAELPEINPSDLKIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR E + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRHE--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 IR+Y P V D R N+ + ++G LD ++ Sbjct: 307 IRTYNF-PQGRVTDHRINLTIYRLDETMEGKLDSLIE 342 >gi|254253376|ref|ZP_04946694.1| Peptide chain release factor 1 [Burkholderia dolosa AUO158] gi|124895985|gb|EAY69865.1| Peptide chain release factor 1 [Burkholderia dolosa AUO158] Length = 360 Score = 232 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 118/344 (34%), Positives = 181/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D RL+ LN ++ ++ + + L RE L + + D EL Sbjct: 9 LDQLSTRLAELNELLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRSDETAAQEL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + ++ + + +E Q L D + +LE+ AG GG ES +A Sbjct: 69 LADPSMRDFAEDEIRSARDRMARLELELQKMLLPKDPNDDRNIFLEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE+++++ E + + G K + I G AY LK E G HR+ R+ Sbjct: 129 GDLLRMYLRFAERQRWQVEMMSESPSDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G + Sbjct: 249 IPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++DGDLD+ + A ++ + Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELIGALVSEHQ 349 >gi|203284000|ref|YP_002221740.1| peptide chain release factor RF-2 [Borrelia duttonii Ly] gi|201083443|gb|ACH93034.1| peptide chain release factor RF-2 [Borrelia duttonii Ly] Length = 347 Score = 232 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 142/348 (40%), Positives = 211/348 (60%), Gaps = 4/348 (1%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + GG FD D +L + + + W + A+ +++ + L I + + +L Sbjct: 1 MKMSGGSFDSDKIKIQLQKYEKQINNENFWNDNKRAQEILKNQNILKTKIEPWENLICQL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D L + ++ +++ + ++ S + D N A+L +H+GAG Sbjct: 61 KDLREL---CKIAESEDDKALLERDVNKLREQYKHILTLSYFKEDIDINSAFLTIHSGAG 117 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTE+ DW NML R Y R++E+R +K E +++ + E GIKS T+ IKG AYG+LK E G Sbjct: 118 GTEACDWVNMLYRTYLRYSERRGYKIELIDLLESE-GGIKSVTIEIKGKYAYGFLKSEVG 176 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRLVRISP+D+ +RHTSF+S+++ PV+DD IEI I D R+DTYRASGAGGQHVN T Sbjct: 177 IHRLVRISPFDAAKKRHTSFASVFIDPVIDDKIEIIIKPEDIRVDTYRASGAGGQHVNKT 236 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVRITH+ TG+V Q Q +RSQH+NK A +L++KLYE ++ + + K +I Sbjct: 237 SSAVRITHLKTGIVTQSQTDRSQHRNKELAMKVLKSKLYEHYKTLEQQKSKSKQQEKKDI 296 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIRSY+ QPY +VKD RT E + V+DG++D+F++ L K Sbjct: 297 SWGNQIRSYIFQPYTLVKDHRTKFENPNIMSVMDGNIDNFIEEYLKWK 344 >gi|317504105|ref|ZP_07962107.1| peptide chain release factor RF2 [Prevotella salivae DSM 15606] gi|315664777|gb|EFV04442.1| peptide chain release factor RF2 [Prevotella salivae DSM 15606] Length = 376 Score = 232 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 126/359 (35%), Positives = 206/359 (57%), Gaps = 12/359 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + + L D +T+ P W + A+ M++ + ++ + Sbjct: 10 IIERTDALHRYLGIDQKKIEFEEEQLRTQAPDFWDDPKRAEAQMKKVKGIEKWLKGYNAC 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ + + + D+ +E + + VE + +++L E D+ DA L+++ Sbjct: 70 RELADELQLAFDFYK--DNMVTEEEVDTDYAKAVKAVEDLELKNMLRQEEDAMDAVLKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PNAYGWL 181 +GAGGTESQDWA ML+RMY RW+E + + +I DG+EAGIKS T+ I+G AYG+L Sbjct: 128 SGAGGTESQDWAQMLMRMYQRWSESHGYNVKVTDIQDGDEAGIKSVTMTIEGGDYAYGYL 187 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVR+SPY++ +R TSF+S++V P+VDD+IE+ + + DT+R+SGAGGQ Sbjct: 188 KSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVYVDPAKVSWDTFRSSGAGGQ 247 Query: 242 HVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 +VN +S VR+ + ++++ + R Q KN+A+A +L+++LY+ L+K++ Sbjct: 248 NVNKVESGVRLRYQYEDPDTGEQEEILIENTETRDQPKNRAKAMLLLKSQLYDRALKKKQ 307 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ K +I WG QIRSYV + VKD RT + + V+DG LD F+KA L Sbjct: 308 AEQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTGFQTSDVDAVMDGKLDGFIKAYLM 365 >gi|330997843|ref|ZP_08321678.1| putative peptide chain release factor 2 [Paraprevotella xylaniphila YIT 11841] gi|329569731|gb|EGG51496.1| putative peptide chain release factor 2 [Paraprevotella xylaniphila YIT 11841] Length = 370 Score = 232 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 129/358 (36%), Positives = 204/358 (56%), Gaps = 11/358 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L D +N ++ +T+ P W + A+ M++ + L I KE+ Sbjct: 10 IKTRTEALYRYLDIENKKIQVEEEQLRTQAPGFWDDAKAAEEQMKKVKGLQKWIDGYKEV 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + + ++ +E R +E + ++L E D DA L+++ Sbjct: 70 KTLCDELELAFDFYK--EEMVTEEEVDGLYSRTVDALEDLELRNMLRQEEDPMDAVLKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDWA+ML+RMY RWAE +K DG+EAGIK+ T+ I+G AYG+LK Sbjct: 128 SGAGGTESQDWASMLMRMYMRWAESHGYKCTISNYQDGDEAGIKTVTMQIEGEFAYGYLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR+SPY++ +R TSF+S++V P+VDDSIE+ + S D +R+ GAGGQ+ Sbjct: 188 SENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVYVDPSRVSWDLFRSGGAGGQN 247 Query: 243 VNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 VN ++ VR+ + ++++ + R Q +N+ A +L+++LY+ LQKR+ Sbjct: 248 VNKVETGVRLRYQYKDPDTGEEEEILIENTESRKQLENRENAMRLLKSQLYDRALQKRKA 307 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ K +I WG QIRSYV + VKD RTN + + + V+DG LD F+K+ L Sbjct: 308 KQAEIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGKLDGFIKSYLM 364 >gi|311111708|ref|YP_003982930.1| peptide chain release factor RF2 [Rothia dentocariosa ATCC 17931] gi|310943202|gb|ADP39496.1| peptide chain release factor RF2 [Rothia dentocariosa ATCC 17931] Length = 375 Score = 232 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 138/361 (38%), Positives = 213/361 (59%), Gaps = 11/361 (3%) Query: 4 SRQLNCLGGLF-------DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56 S ++ L ++ D + L L+ + P LW + A+ + H + Sbjct: 7 SAEIKDLRSIYASIVAVSDLEGIKCALEDLSQQASAPELWDDPEHAQRVTSALSHKQAEL 66 Query: 57 SFIKEIQDRLCDNLILLELALEEDDCSILQ---ETSDNLQRIKLEVEYKQFESLLSGEAD 113 + + + R+ D +++ELA ED+ S E + ++ +++ + LLSGE D Sbjct: 67 NRLTNLASRIDDVEVMVELAQTEDESSAEDLLAEAEAECKELRKKLDELEVLVLLSGEYD 126 Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 +A + + +GAGG ++ D+A MLLRMY RWAEK + T+ L+ EEAG+KS T + Sbjct: 127 QREAVVTIRSGAGGVDAADFAEMLLRMYLRWAEKNGYPTKVLDTSYAEEAGLKSVTFEVN 186 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 P A+G L E G HRLVRISP+D+ RR TSF+++ V P+++ + +EI ES+ ++D + Sbjct: 187 APYAFGRLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDALEIPESEIKVDVF 246 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 R+SG GGQ VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L L ++ + Sbjct: 247 RSSGPGGQSVNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLMLRQEQED 306 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + WG Q+RSYVL PYQMVKDLRT E+ + S VLDG L+ F++ + Sbjct: 307 AKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYEEGNTSSVLDGGLNRFIEEGIRW 365 Query: 354 K 354 + Sbjct: 366 R 366 >gi|163803585|ref|ZP_02197452.1| peptide chain release factor 1 [Vibrio sp. AND4] gi|159172627|gb|EDP57484.1| peptide chain release factor 1 [Vibrio sp. AND4] Length = 362 Score = 232 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 116/339 (34%), Positives = 180/339 (53%), Gaps = 9/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R + DP + N + + L +E L+ + Q D ++ Sbjct: 9 LETLVERYEEVQHLLGDPDVIGNQDKFRALSKEYSQLEEVTQCFQAYQQAQDDLAAAEDM 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 A E+D+ + I+ + Q L D + +LE+ AGAGG E+ Sbjct: 69 ANEDDEEMREMAQEEIKEAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AEKR ++ E + ++ E G K + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSKYAEKRGWRIEVMSSNESEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RI Sbjct: 189 VPATESQGRVHTSACTLAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG VV+CQ ERSQHKNKA+A +L A++ + E ++R + ++ + +G G Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAE--VSDTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +IR+Y P V D R N+ ++V++GDL + Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTLYRLNEVMEGDLQSLID 344 >gi|221201722|ref|ZP_03574760.1| peptide chain release factor 1 [Burkholderia multivorans CGD2M] gi|221207203|ref|ZP_03580213.1| peptide chain release factor 1 [Burkholderia multivorans CGD2] gi|221213331|ref|ZP_03586306.1| peptide chain release factor 1 [Burkholderia multivorans CGD1] gi|221166783|gb|EED99254.1| peptide chain release factor 1 [Burkholderia multivorans CGD1] gi|221172791|gb|EEE05228.1| peptide chain release factor 1 [Burkholderia multivorans CGD2] gi|221178538|gb|EEE10947.1| peptide chain release factor 1 [Burkholderia multivorans CGD2M] Length = 360 Score = 232 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 115/346 (33%), Positives = 176/346 (50%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72 D RL+ LN ++ ++ + + L RE L + + D L Sbjct: 9 LDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRSDETAAQEL 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L D ++ K D + ++E+ AG GG ES Sbjct: 69 LADPSMRDFAEEEIRSARERMARLEVELQKMLL--PKDPNDDRNIFVEIRAGTGGDESAL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A LLRMY R+AE+++++ E + + G K + I G AY LK E G HR+ R Sbjct: 127 FAGDLLRMYLRFAERQRWQVEMMSESPSDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+ Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G Sbjct: 247 THLPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ ++DGDLD+ + A ++ + Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELIGALVSEHQ 349 >gi|291166475|gb|EFE28521.1| peptide chain release factor 1 [Filifactor alocis ATCC 35896] Length = 354 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 113/351 (32%), Positives = 182/351 (51%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ LN DP ++ + K M+E + I +E + D Sbjct: 1 MFDNLKALEEKYEELNKIVADPSTMNDMDKWKAYMKEISDTEPIIQKYREFKQTRDDIEG 60 Query: 72 LLELALEEDDCSILQETSDNLQR----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 ++ EE D + + L ++ + + D + +E+ GAGG Sbjct: 61 SKQILEEEKDEELRELAKMELSEKEELMEKVQNELKLLLIPKDPNDEKNVIVEIRGGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A +L RMY+ +A R +K E + ++ G K +I G AY LK E GV Sbjct: 121 DEAALFAGVLFRMYSMYASARNWKVEMMSANETGIGGYKEVVFMITGKGAYSRLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S+ R HTS S++ V P D +E+E+ +D R+D +R+SG GGQ VNTTD Sbjct: 181 HRVQRVPETESSGRIHTSTSTVAVLP-EVDDVEVELDMNDVRVDVFRSSGNGGQSVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+V+ Q E+SQ KNK +A+ +L+AKLY+LEL+K + + K+++G Sbjct: 240 SAVRLTHKPTGIVISMQDEKSQLKNKEKAFKILKAKLYDLELEK--AQKELAQERKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + + L+GD+D+ + A + + Sbjct: 298 SGDRSERIRTYNY-PQGRVTDHRIGLTLYKLENFLNGDIDEILDALITTDQ 347 >gi|73666975|ref|YP_302991.1| peptide chain release factor 2 [Ehrlichia canis str. Jake] gi|72394116|gb|AAZ68393.1| bacterial peptide chain release factor 2 (bRF-2) [Ehrlichia canis str. Jake] Length = 335 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 166/333 (49%), Positives = 227/333 (68%), Gaps = 2/333 (0%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 L LN + LW + A+ ++ ER + I+ E+++ LL++ D Sbjct: 2 LVDLNVQCSSTSLWTDNALAQNILSERARVSKIITSFTELEEEFNYYTELLDVVKN-DTD 60 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 +L + L ++K ++ K+ E L S EAD ND ++E+ +GAGGTES DW+ MLLRMY Sbjct: 61 ELLNDIEIGLTKLKERIQKKEVECLFSNEADQNDCFIEIQSGAGGTESNDWSCMLLRMYV 120 Query: 143 RWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 RWAE F TE + DGEE GIKSAT+ + G NAYGW K E G+HRLVRISP++SN++ Sbjct: 121 RWAEIYHNFTTEIVYKLDGEEVGIKSATIKVTGDNAYGWSKTESGIHRLVRISPFNSNAK 180 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 RHT+FSSI V P+ D++I IE + D RIDTYRASGAGGQHVN T+SAVRITHIP+G+VV Sbjct: 181 RHTTFSSILVSPITDENINIETLDKDLRIDTYRASGAGGQHVNKTESAVRITHIPSGIVV 240 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 QCQ RSQH+N A+A N+L+++LY+L+LQ++E+ + + IGWG QIRSY++ PYQ Sbjct: 241 QCQNNRSQHQNLAEAHNLLKSRLYQLKLQEKEKKMAEEHNKRCNIGWGNQIRSYIMHPYQ 300 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 MVKD+RT E + + VLDG+LD F+ + L K Sbjct: 301 MVKDVRTGHEIGNVNSVLDGNLDPFIISALTAK 333 >gi|254491165|ref|ZP_05104346.1| peptide chain release factor 1 [Methylophaga thiooxidans DMS010] gi|224463678|gb|EEF79946.1| peptide chain release factor 1 [Methylophaga thiooxydans DMS010] Length = 362 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 112/342 (32%), Positives = 185/342 (54%), Gaps = 9/342 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ V R + DP + + + L +E L+ +S + L + Sbjct: 9 LESLVDRHEEIAGLLADPDTMADQNKFRTLSQEYAQLEPVVSNFTAYRHTLSAIEDANLM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL---LSGEADSNDAYLEVHAGAGGTESQD 132 E+D + Q + + E + D + +LE+ AG GG E+ Sbjct: 69 LEEDDAEMREMAREELNQAEQTQEELELSLQKLLLPKDPNDQRNIFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+++AE R++K E + +GE G K I G AY LK E G HR+ R Sbjct: 129 FSGDLFRMYSKYAEVRRWKVEVINAQEGEHGGYKEMICRIVGEGAYSRLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ + P VD+ ++I+ +D R+DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRIHTSACTVAILPEVDEIDAVDINPADIRVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ+ERSQHKN+A+A ++L++++ ++QK+E E+ K+ +G G Sbjct: 249 THLPTGIVVECQEERSQHKNRAKAMSVLQSRIMAEQVQKQEAEQ--AETRKSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P + D R N+ +++++GDLD ++ + Sbjct: 307 ERIRTYNY-PQGRITDHRINLTLYKLNEIVEGDLDQVIEPLI 347 >gi|119945323|ref|YP_943003.1| peptide chain release factor 1 [Psychromonas ingrahamii 37] gi|166223592|sp|A1SV89|RF1_PSYIN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119863927|gb|ABM03404.1| bacterial peptide chain release factor 1 (bRF-1) [Psychromonas ingrahamii 37] Length = 363 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 112/346 (32%), Positives = 181/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R + DP + + + L +E L+ + K+ Q D + + Sbjct: 9 LEVLVERYEEVQALLGDPGTISDQNKYRELTKEYAQLEVVVLSFKKYQSAQNDLAVAEMM 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + ++D + + ++ Q L D + YLE+ AGAGG E+ Sbjct: 69 SDDDDPDMREMAKEEIKEAKKTVEKLAADLQILLLPKDPNDDRNCYLEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AE + ++ E + + E+ G K I G AYG +K E G HR+ R Sbjct: 129 FAGNLFRMYSKYAESKGWRVEVMNSNASEQGGYKELIAKIDGEGAYGIMKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P V ++ I I+ +D ++DT+RASGAGGQHVN TDSAVR+ Sbjct: 189 VPETESQGRIHTSACTVVVMPEVPEAEAISINPADLKVDTFRASGAGGQHVNKTDSAVRL 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG VV+CQ +RSQHKN+AQA ++L+++L + E +K ++ + G Sbjct: 249 THLPTGTVVECQDQRSQHKNRAQAMSVLQSRLQQAEDEKSHAEEQTI--RRSLVASGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ ++VL+GDL+ + L + Sbjct: 307 ERIRTYNY-PQGRVSDHRINLTVYRLNEVLEGDLNALHEPILLEDQ 351 >gi|119775698|ref|YP_928438.1| peptide chain release factor 1 [Shewanella amazonensis SB2B] gi|166223600|sp|A1S8R2|RF1_SHEAM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119768198|gb|ABM00769.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella amazonensis SB2B] Length = 363 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 115/339 (33%), Positives = 179/339 (52%), Gaps = 9/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R + D + + + L +E L++ + K Q + D E+ Sbjct: 9 LEGLLERNEEVLALLSDASIISDQDRFRALSKEYAQLEDVVKGFKAYQQAVADLETAKEM 68 Query: 76 ALEEDDCSILQETSDNLQRI---KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + + Q L D +A++E+ AGAGG E+ Sbjct: 69 LEEDDPELKEMAQEEIKSAKASLERLEAELQILLLPKDPNDEANAFVEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE ++++ E + ++GE G K G YG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAETQRWQVEIMSANEGEHGGYKEVIARFSGERVYGKLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V V ++ +EI+ S+ RIDT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRVHTSACTVAVLHEVPEAEAVEINPSELRIDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG VV+CQ ERSQHKNKA+A ++L A+L E +KR + + + +G G Sbjct: 249 THLPTGTVVECQDERSQHKNKARAMSVLVARLQAAEDEKRR--SAEATTRRNLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +IR+Y P V D R N+ ++V++GDL+ ++ Sbjct: 307 ERIRTYNF-PQGRVSDHRINLTLYRLNEVMEGDLNALIE 344 >gi|157376591|ref|YP_001475191.1| peptide chain release factor 1 [Shewanella sediminis HAW-EB3] gi|189039993|sp|A8FYZ0|RF1_SHESH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|157318965|gb|ABV38063.1| peptide chain release factor 1 [Shewanella sediminis HAW-EB3] Length = 361 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 110/341 (32%), Positives = 185/341 (54%), Gaps = 9/341 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R + DP + + + L +E L++ ++ K Q D E+ Sbjct: 9 LEGLLERNEEVLALLSDPGVISDQERFRALSKEYSQLEDVVTSFKSFQQATEDLEAAKEM 68 Query: 76 ALEEDDCSILQETSDNLQRI---KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 A ++D + + + + Q L D N+ ++E+ AGAGG E+ Sbjct: 69 ASDDDPELKEMAQEEMKEAKSLLEKLEDELQILLLPKDPNDDNNCFIEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++ E ++++ E + ++GE G K + G YG LK E G HR+ R Sbjct: 129 FAGDLFRMYSKYVESKRWQLEVMNTNEGEHGGFKEVIAKVSGEGVYGQLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P + +S IEI++ D ++DT+RASGAGGQHVN TDSA+R+ Sbjct: 189 VPETESQGRVHTSACTVVVLPEIPESEAIEINKGDLKVDTFRASGAGGQHVNKTDSAIRL 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIP+G+VV+CQ +RSQHKN+AQA ++L A++ +E +KR + + +G G Sbjct: 249 THIPSGIVVECQDQRSQHKNRAQAMSVLTARIQAVEDEKRRSAEE--STRRNLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V + R N+ ++V++G+LD ++ Sbjct: 307 ERIRTYNF-PQGRVSEHRINLTLYRLNEVMEGELDAILEPL 346 >gi|319408605|emb|CBI82260.1| peptide chain release factor RF-2 [Bartonella schoenbuchensis R1] Length = 323 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 211/309 (68%), Positives = 255/309 (82%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ L+++I+ I+ L + + L+ + EE D I+ + + ++++K E++ +Q + Sbjct: 2 MRERQCLEDSINGIRLFTQTLEECIELIAMGEEESDEEIITDAENTIRKLKSEIDKRQID 61 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LLSGEADSND YLE+HAGAGGTESQDWA+MLLRMY RWAE+ K K E LEIHDGEEAGI Sbjct: 62 LLLSGEADSNDTYLEIHAGAGGTESQDWASMLLRMYIRWAEQHKMKVEVLEIHDGEEAGI 121 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+L+KG NAYG LK E GVHRLVRISP+DSN+RRHTSF+S+WVY VVDD+IEI+ISE Sbjct: 122 KSATILVKGHNAYGMLKTESGVHRLVRISPFDSNARRHTSFASVWVYSVVDDNIEIDISE 181 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+LY Sbjct: 182 SDIRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQVERSQHKNRATAWSMLRARLY 241 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KRE N E+SKTEIGWG QIRSYVLQPYQ+VKDLRT +E T P VL+G+LD Sbjct: 242 EEELKKREAETNAIEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTDPQTVLNGNLDA 301 Query: 346 FMKATLAIK 354 F++A LA + Sbjct: 302 FIEAALAQR 310 >gi|307244007|ref|ZP_07526126.1| peptide chain release factor 1 [Peptostreptococcus stomatis DSM 17678] gi|306492531|gb|EFM64565.1| peptide chain release factor 1 [Peptostreptococcus stomatis DSM 17678] Length = 354 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 116/347 (33%), Positives = 182/347 (52%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + L+ K DP + + + LM+E ++ + +E ++ Sbjct: 5 LKVLEDKYKELSQKVADPDIISDQPTWQKLMKETSEIEPIVMKYREYSKASQSIAESKQI 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 EE D + + L + +E + + D + +E+ GAGG E+ Sbjct: 65 LEEESDEDLRELAKMELSESEALLEEYENELKILLVPKDPNDEKNVIIEIRGGAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AE+R +KT + ++ G K + +IKG AY LK E GVHR+ Sbjct: 125 LFAGDLFRMYSRYAERRGWKTSLMSSNETGVGGYKEVSFMIKGKGAYSRLKYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ V P + +EI+I+ D R+D +RASG GGQ VNTTDSAVR Sbjct: 185 RIPTTESGGRIHTSTATVAVLP-EVEDVEIDINPEDVRVDVFRASGNGGQCVNTTDSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTG VV CQ E+SQ KNK +A +L+A+LY+ L +++ +I K+++G G Sbjct: 244 LTHIPTGEVVSCQDEKSQLKNKEKAMKVLKARLYDKALAEQQ--KDIAAERKSQVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +DGDLD+ + A + + + Sbjct: 302 SERIRTYNF-PQGRVSDHRINLTLYKLDSFIDGDLDEMIDALITVDQ 347 >gi|209516553|ref|ZP_03265407.1| peptide chain release factor 1 [Burkholderia sp. H160] gi|209502994|gb|EEA02996.1| peptide chain release factor 1 [Burkholderia sp. H160] Length = 360 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 116/344 (33%), Positives = 175/344 (50%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D RL+ LN + N+ + + L RE L + + D EL Sbjct: 9 LDQLTTRLAELNDLLSREDITANLDQYRKLTREHAELGPVVDQYGLWRQAQNDAATAQEL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + +E + Q L D + +LE+ AG GG ES +A Sbjct: 69 LTDASMRDFAEEEIRAARDRMETLGVELQKMLLPKDPNDDRNIFLEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE+ +++ E + + + G + + I G AY LK E G HR+ R+ Sbjct: 129 GDLLRMYLRYAERNRWQVEMMSASESDLGGYREVIVRIAGDAAYSKLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ + K IG G + Sbjct: 249 LPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QTHEQQTKEAATRKNLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++DGDLD+ + A ++ + Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELIAALVSEHQ 349 >gi|54309994|ref|YP_131014.1| peptide chain release factor 1 [Photobacterium profundum SS9] gi|61214628|sp|Q6LNB4|RF1_PHOPR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|46914433|emb|CAG21212.1| putative peptide chain release factor A [Photobacterium profundum SS9] Length = 362 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 113/346 (32%), Positives = 183/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R + DP + + + + L +E L++ + D E+ Sbjct: 9 LETLVERYEEIQHLLGDPGIIGDQNKFRALSKEYSQLEDITQCFQAYLGAKDDLEAAEEM 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 A ++D + + I + Q + D + ++E+ AGAGG E+ Sbjct: 69 AKDDDPEMREMAQEEVKESKANILRLEDELQVLLIPKDPNDDRNCFVEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE+R ++ E + + E+ G K + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAERRGWRIEVINENRSEQGGYKEMIAKVSGDGAYGVLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P V ++ EI+ D +IDT+R+SGAGGQHVNTTDSA+RI Sbjct: 189 VPATESQGRVHTSACTVAVMPEVPEAEIPEINTGDLKIDTFRSSGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR + + +G G Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLAARITKAEEEKRHAE--EASTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + ++V++GD+D ++ + + Sbjct: 307 DRIRTYNY-PQGRVSDHRITLTLYRLNEVMEGDMDSLIQPVIQEHQ 351 >gi|332298739|ref|YP_004440661.1| Peptide chain release factor 1 [Treponema brennaborense DSM 12168] gi|332181842|gb|AEE17530.1| Peptide chain release factor 1 [Treponema brennaborense DSM 12168] Length = 359 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 115/342 (33%), Positives = 178/342 (52%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + LN +DP L ++ K +MRE HL + E ++ L L Sbjct: 5 LEELSKRYAELNDMIQDPELVRDPKRYKEIMREHSHLSQVMDSYAEYKEVLQGISEAQHL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 EEDD + + + L+ ++ V + + + + +E+ GAGG E+ Sbjct: 65 ITEEDDHDMKEMAREELKALESRVPEMESALKMLLIPPDPLEEKNIIMEIRGGAGGDEAS 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYTR+AE + +K E ++ + E G K + I G YG L+ E GVHR+ Sbjct: 125 LFAADLFRMYTRYAEIKNWKYEIMDASETEVGGYKEISFSISGKFVYGSLRWEGGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS ++ V P +++ I D R+D RA G GGQ VNTTDSAVR Sbjct: 185 RVPETEAQGRIHTSAVTVAVLPEAEETEIE-IRPEDLRVDVMRAGGPGGQCVNTTDSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q E+SQ KNKA+A +LRA+L++LE K++ + K+ +G G Sbjct: 244 LTHLPTGLVVIQQDEKSQIKNKAKAMRVLRARLFDLEESKKQAERSAA--RKSMVGSGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R N+ + G+LD+ + A Sbjct: 302 SERIRTYNF-PQNRVTDHRINLTLYKLDQFMQGNLDEMLDAL 342 >gi|313202185|ref|YP_004040843.1| peptide chain release factor 1 [Methylovorus sp. MP688] gi|312441501|gb|ADQ85607.1| peptide chain release factor 1 [Methylovorus sp. MP688] Length = 356 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 112/339 (33%), Positives = 172/339 (50%), Gaps = 7/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +RL LN ++ + + RE + + + + D + Sbjct: 5 LATLSERLDELNRLLSSEDATSDMDNYRKISREHAEITPIVEQYRAYEQCENDLKEAHAM 64 Query: 76 ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE + + + Q L D + +LE+ AG GG ES +A Sbjct: 65 LADPEMKAFAQEEIEAGKARLEEIAMALQKLLLPKDPNDERNIFLEIRAGTGGDESALFA 124 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE++++K E + + E G K I+G AY LK E G HR+ R+ Sbjct: 125 GDLFRMYSRYAERQRWKVEVVSASESEVGGYKEIIAKIEGFGAYSKLKFESGGHRVQRVP 184 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P VD+ ++ I+ +D RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 185 ETETQGRIHTSACTVAVLPEVDEVSDVTINPADIRIDTFRASGAGGQHINKTDSAVRITH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 PTG+VV+CQ RSQH NKAQA +L A++ Q E+ + I ++ IG G + Sbjct: 245 FPTGIVVECQDGRSQHSNKAQAMQVLAARI--KAKQVNEQQSKIASERRSLIGSGDRSER 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P + D R N+ + +GD+D+ + A Sbjct: 303 IRTYNY-PQGRITDHRINLTLYKIDAITEGDMDELINAL 340 >gi|188995885|ref|YP_001930137.1| peptide chain release factor 1 [Porphyromonas gingivalis ATCC 33277] gi|188595565|dbj|BAG34540.1| peptide chain release factor 1 [Porphyromonas gingivalis ATCC 33277] Length = 352 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 103/345 (29%), Positives = 175/345 (50%), Gaps = 11/345 (3%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D R ++T DP + ++ L +E + L+ + ++ ++ L + Sbjct: 2 DGLESRFEEISTLITDPAVIADMKRFTKLSKEYRDLEKIHTAGRDYRNLLANIEEAKHTM 61 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQD 132 +E D + + + L + + + + D +A +E+ G GG E+ Sbjct: 62 AKESDEELREMAREMLAEANERLPILEEEIKMLLIPANPEDDKNAIVEIRGGTGGDEAAL 121 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY ++ E + ++ E ++ +G G K +KG YG LK E GVHR+ R Sbjct: 122 FAGDLYRMYVKYCESKGWQVEVTDLSEGATGGYKEIVFSVKGEGVYGILKYESGVHRVQR 181 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ V P + +++EI+ +D + T R+ GAGGQ+VN ++ V++ Sbjct: 182 VPATETQGRIHTSAATVAVLP-EAEEVDVEINPADIEMQTSRSGGAGGQNVNKVETKVQL 240 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311 TH PTG+VV CQQ RSQ N+ A MLR+KLY++EL K E I KT + G + Sbjct: 241 THKPTGMVVVCQQARSQIANRELAMQMLRSKLYDIELSKHNE--AIAARRKTMVSTGDRS 298 Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P V D R N+ + S V+DG++ F+ A + + Sbjct: 299 AKIRTYNY-PQGRVTDHRINMTVYNLSAVMDGEVQPFIDALIIAE 342 >gi|71909299|ref|YP_286886.1| peptide chain release factor 1 [Dechloromonas aromatica RCB] gi|119361530|sp|Q479R5|RF1_DECAR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|71848920|gb|AAZ48416.1| bacterial peptide chain release factor 1 (bRF-1) [Dechloromonas aromatica RCB] Length = 360 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 115/344 (33%), Positives = 182/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V RL ++ P ++ + + L RER ++ + + D + Sbjct: 9 LELLVDRLDEIDRMLSAPSTASDMDQFRKLSRERAEVEPVVVQFNAFRQAENDLAEAEAM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQDWA 134 + D +E + E+E + + LL D LE+ AG GG ES +A Sbjct: 69 LSDPDMREFAEEEMAAAKARLPELELELQKLLLPKDPNDERSVLLEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE+++++ E + + E G + I G AY LK E G HR+ R+ Sbjct: 129 GSLFRMYSRFAERQRWQVEVMSASESELGGYREIICRIAGNGAYSRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P VD+ ++ ++ +D RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 189 ETETQGRIHTSACTVAVMPEVDEVEDVNLNPADLRIDTFRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+V +CQ RSQH NKA A +L A++ ++ Q R + A+I + K+ IG G + Sbjct: 249 LPTGIVAECQDGRSQHANKASALKVLAARIKDV--QVRAQQAHISSTRKSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ + ++DGD+D+ + A A + Sbjct: 307 IRTYNF-PQGRITDHRINLTLYKIAAIMDGDMDELLGALAAEHQ 349 >gi|291520820|emb|CBK79113.1| bacterial peptide chain release factor 1 (bRF-1) [Coprococcus catus GD/7] Length = 357 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 109/351 (31%), Positives = 185/351 (52%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D+ + R + + DP + + + LM+E+ L + E ++ Sbjct: 1 MFDRLDDILIRYQQIMEELNDPDVVNDQKHFRKLMKEQSDLQPLVEKYTEYKNTKQTIED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127 LE+ EDD + + + L K + + E D + +E+ AGAGG Sbjct: 61 SLEMLEVEDDEEMKEMLKEELSEAKSNIAKIEQELKVLLIPKDPMDEKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+++AE +++K E +++ + G K ++ G + Y +K E GV Sbjct: 121 DEAALFAAELFRMYSKYAESKRWKIEMMDVSENGIGGFKECVFMVSGDHVYSRMKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ + P + +++EI +D RID RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTVTVAIMP-EAEEVDVEIDMNDVRIDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+V+ Q E+SQ +NK +A+ +LR+KL E+E++K+ K ++G Sbjct: 240 SAVRLTHNPTGIVIYSQTEKSQLQNKEKAFRLLRSKLLEIEIEKKHAEEAAL--RKNQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P + R + D+++GDLD+ + + +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRCTEHRIKLTLYRLGDIMNGDLDEIIDSLIAADQ 347 >gi|156973549|ref|YP_001444456.1| peptide chain release factor 1 [Vibrio harveyi ATCC BAA-1116] gi|166223617|sp|A7MY68|RF1_VIBHB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|156525143|gb|ABU70229.1| hypothetical protein VIBHAR_01250 [Vibrio harveyi ATCC BAA-1116] Length = 362 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 115/339 (33%), Positives = 179/339 (52%), Gaps = 9/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R + DP + N + + L +E L+ + Q D ++ Sbjct: 9 LETLVERYEEVQHLLGDPDVIGNQDKFRALSKEYSQLEEVTKCFQAYQQAQDDLAAAEDM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 A E+D+ + + + Q L D + +LE+ AGAGG E+ Sbjct: 69 ANEDDEEMREMAQEEIKEAKEAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AEKR ++ E + ++ E G K + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RI Sbjct: 189 VPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG VV+CQ ERSQHKNKA+A +L A++ + E ++R + ++ + +G G Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAE--VSDTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +IR+Y P V D R N+ ++V++GDL + Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTIYRLNEVMEGDLQSLID 344 >gi|260890431|ref|ZP_05901694.1| peptide chain release factor 1 [Leptotrichia hofstadii F0254] gi|260860051|gb|EEX74551.1| peptide chain release factor 1 [Leptotrichia hofstadii F0254] Length = 360 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 125/351 (35%), Positives = 187/351 (53%), Gaps = 11/351 (3%) Query: 13 LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL- 70 +F D+ V + L DP + + + + +D + ++R + Sbjct: 1 MFQKLDDVVLKHKELTEMLMDPEVVSDPKKIMEYNKALNSIDEVVQKYTYYKNRKEEMES 60 Query: 71 ---ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L E +L+E + I E + L D + +E+ AGAGG Sbjct: 61 LKEDLKAEKDSEMKEMMLEEIHSIEEEIPQLEEELKILLLPKDPNDDKNVIMEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RM+TR+AE+ ++KTE ++ + G+K T LIKG AY LK E GV Sbjct: 121 DEAALFAADIFRMFTRYAERNRWKTEIIDKSEIGVGGLKEVTFLIKGNGAYSRLKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S+ R HTS ++ V P +DD E+EI+ SD +IDTYR+SGAGGQHVNTTD Sbjct: 181 HRVQRVPATESSGRVHTSTITVAVLPEIDDVSEVEINPSDLKIDTYRSSGAGGQHVNTTD 240 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VV Q RSQ KN+ A +L +KLYE+E +K+ ++++G Sbjct: 241 SAVRITHLPTGLVVTSQDGRSQIKNREAAMKVLASKLYEMEYEKQRSAVEN--ERRSQVG 298 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + VLDGDLD+ + A +A ++ Sbjct: 299 SGDRSEKIRTYNF-PQGRVTDHRIKLTLHRLEGVLDGDLDEMIDALIAYEQ 348 >gi|237752014|ref|ZP_04582494.1| peptide chain release factor 2 [Helicobacter winghamensis ATCC BAA-430] gi|229376581|gb|EEO26672.1| peptide chain release factor 2 [Helicobacter winghamensis ATCC BAA-430] Length = 367 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 165/349 (47%), Positives = 226/349 (64%), Gaps = 4/349 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ + + + + R+ + + W++ +A L +E++ + + Sbjct: 13 LNIKCENIKKIMQPSSLKNRILEITELEQTKDFWEDAKKAGELQKEKKRCERQLEKYNNA 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L D + L EL+ ++ + + + ++ + E +LS DSN+A + Sbjct: 73 KSALDDAIELFELSSDDLESLEVLFAESEEL--ESIIKNAEIEVMLSDPLDSNNAIFTIT 130 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+ML RMY RWAE++ FK E L+ +G+EAGIK A+ +IKG NAYG+ K Sbjct: 131 PGAGGTESQDWASMLYRMYLRWAERKDFKVELLDYQEGDEAGIKDASFIIKGENAYGYAK 190 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+N++RHTSFSS+ V P +DD I IEI E D IDTYRASGAGGQH Sbjct: 191 AENGVHRLVRISPFDANAKRHTSFSSVQVSPEIDDEINIEIDEKDLEIDTYRASGAGGQH 250 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH P+G+VVQCQ +RSQHKNKA A ML++KLYELE KRE +N + Sbjct: 251 VNKTESAVRITHKPSGIVVQCQNDRSQHKNKASALKMLKSKLYELERLKREAESN--HTD 308 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K + GWG QIRSYVL PYQ VKDLR+N+ T+ +LDGD+D ++ L Sbjct: 309 KGDNGWGHQIRSYVLTPYQQVKDLRSNLAYTNVDAILDGDIDTILEGVL 357 >gi|83720975|ref|YP_443437.1| peptide chain release factor 1 [Burkholderia thailandensis E264] gi|167582488|ref|ZP_02375362.1| peptide chain release factor 1 [Burkholderia thailandensis TXDOH] gi|257137781|ref|ZP_05586043.1| peptide chain release factor 1 [Burkholderia thailandensis E264] gi|119361517|sp|Q2SUG2|RF1_BURTA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|83654800|gb|ABC38863.1| peptide chain release factor 1 [Burkholderia thailandensis E264] Length = 360 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 115/346 (33%), Positives = 176/346 (50%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72 D RL+ LN ++ ++ + + L RE + + + + D L Sbjct: 9 LDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQEL 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L A D + D + ++E+ AG GG ES Sbjct: 69 LADASMRDFAEDELRGARERMSRLAAELQTMLL--PKDPNDERNIFVEIRAGTGGDESAL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A LLRMY R+AE+++++ E + + G K + I G AY LK E G HR+ R Sbjct: 127 FAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+ Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ ++DGDLD+ + A ++ + Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVSEHQ 349 >gi|331006967|ref|ZP_08330210.1| Peptide chain release factor 1 [gamma proteobacterium IMCC1989] gi|330419229|gb|EGG93652.1| Peptide chain release factor 1 [gamma proteobacterium IMCC1989] Length = 360 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 112/351 (31%), Positives = 177/351 (50%), Gaps = 10/351 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + D +R + DP + + L RE ++ ++ E + L + Sbjct: 4 SILEKLDLLQERYVEVGALLSDPGTIADQNRFRELSREYAEIEPVVNCYNEYRKILDNLE 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN---DAYLEVHAGAGG 127 L + D + + + L D N + +LE+ AG GG Sbjct: 64 EAQVLLKDSDPDMRAMGQEELKSAEEERAPLELELQKLLLPKDPNDDKNVFLEIRAGTGG 123 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ ++ L RMY+++AEKR+++ E + E+ G K I G Y LK E G Sbjct: 124 DEAAIFSGDLFRMYSKYAEKRRWQVEIVSESRSEQGGYKEVIARIVGQGVYSQLKFESGA 183 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ + P D E+ I+++D R+DT+RASGAGGQHVN TD Sbjct: 184 HRVQRVPETESQGRVHTSACTVAIMPEADAQAEVAINKADLRVDTFRASGAGGQHVNKTD 243 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SA+R+THIPTGVVV+CQ ERSQHKN+A+A ++L A+L + + + K +G Sbjct: 244 SAIRLTHIPTGVVVECQDERSQHKNRARAMSLLAARLQSAQDD--VAAKEMADERKNLVG 301 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R N+ ++V++GDLDD ++ + + Sbjct: 302 SGDRSERIRTYNF-PQGRVTDHRINLTLYRLNEVMEGDLDDVVQPLVNEHQ 351 >gi|297735238|emb|CBI17600.3| unnamed protein product [Vitis vinifera] Length = 451 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 135/355 (38%), Positives = 206/355 (58%), Gaps = 3/355 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +S + + + L+ L K D W + +A+ + + + I + + Sbjct: 88 ISERAEEIRASAGLQQLEEELAALEMKAADSSFWDDRAKAQETLLALTDVKDKIKLLTDF 147 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSNDAYLE 120 + ++ D +++L E D + ++ + LLSG D A + Sbjct: 148 KTQVEDAETIVKLTEEMDSIDTGLLEEAANIIKELNKALDRFELTQLLSGPYDKEGAVIS 207 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + AGAGGT++QDWA+MLLRMY RW EK+++KT +E GEEAGIKSAT+ ++G AYG+ Sbjct: 208 ITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSMGEEAGIKSATIELEGRYAYGY 267 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAG 239 L GE+G HR+VR SP+++ R TSFS + V P+ ++S+++EI E D I RA G G Sbjct: 268 LSGEKGTHRIVRQSPFNAKGLRQTSFSGVEVMPLLPEESMDVEIPEEDLEISFSRAGGKG 327 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ+VN ++AVRITHIPTGV V+C +ERSQ NK +A + L+AKL + ++R Sbjct: 328 GQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQI 387 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG+QIR+YV PY++VKD+RT E + + V+DG+L+ F+KA L K Sbjct: 388 RGDAVKAEWGQQIRNYVFHPYKLVKDVRTGYETSDITSVMDGELEPFIKAYLKFK 442 >gi|269792432|ref|YP_003317336.1| peptide chain release factor 1 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100067|gb|ACZ19054.1| peptide chain release factor 1 [Thermanaerovibrio acidaminovorans DSM 6589] Length = 357 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 124/346 (35%), Positives = 185/346 (53%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72 + + ++ DP + NV E + L R L + +E + L + L Sbjct: 7 LEEIESAFQDIESRMADPEISNNVQEMQSLSRRHSELYPVVQAFREYRKVMRSLEEAQEL 66 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 LE EE +E + + + L D + +E+ AGAGG E+ Sbjct: 67 LEQDDEEMRQLAKEEVQRLSDMLPGLEQDLKVLLLPRDPNDHKNVIIEIRAGAGGDEAAL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMYTR+ E++ ++ E +E+++ G K L+KG AY LK E GVHR+ R Sbjct: 127 FAADLFRMYTRYTERQGWRYEIMEMNETGIGGYKEVVFLVKGEGAYSKLKFESGVHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 I +++ R HTS +++ V P + ++++I D +IDTYRASGAGGQ+VN TDSAVRI Sbjct: 187 IPVTEASGRIHTSTATVAVLP-EAEDVDVQIRPEDLKIDTYRASGAGGQYVNMTDSAVRI 245 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV CQ ERSQ KN+A+A +LRA+LY+ ELQK++ A + K ++G G Sbjct: 246 THIPTGLVVTCQDERSQLKNRAKAMQLLRARLYDQELQKQQ--AQMAAERKGQVGTGDRS 303 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R VLDGDL + ++A + Sbjct: 304 ERIRTYNY-PQNRLTDHRIGFTLYKLDQVLDGDLYELIEALRVADQ 348 >gi|317486540|ref|ZP_07945363.1| peptide chain release factor 1 [Bilophila wadsworthia 3_1_6] gi|316922215|gb|EFV43478.1| peptide chain release factor 1 [Bilophila wadsworthia 3_1_6] Length = 356 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 109/345 (31%), Positives = 179/345 (51%), Gaps = 11/345 (3%) Query: 13 LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCD 68 +F ++ ++ L + DP ++ + + L + L + +E++ L D Sbjct: 1 MFAKLESLERKFLDLEQELADPTVFNDQDRYRKLTKAHSDLKPVVDIFRQYRELKQNLAD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 N LL A + +E +++ + L + D + LE+ AG GG Sbjct: 61 NQELLNDADPDIREMAHEEIKSIEEKLPELEHDLKVLLLPTDPLDEKNIILEIRAGTGGE 120 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ + L RMY R+AEK +K E + + + G K LI G Y LK E G H Sbjct: 121 EAALFGGDLFRMYCRYAEKMGWKVEIMSQSESDNGGYKEVIALISGDKVYSRLKFESGTH 180 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS +++ + P + +++++ D R D YR+SG GGQ VNTTDS Sbjct: 181 RVQRVPATESQGRIHTSAATVAIMP-EAEEVDLDLKPEDLRFDVYRSSGPGGQSVNTTDS 239 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+THIPTG+VV CQ E+SQHKNKA+ +L ++L L++++ E+ A + + + ++G Sbjct: 240 AVRVTHIPTGLVVCCQDEKSQHKNKAKGLKILCSRL--LQMKQDEQNAALADQRRAQVGT 297 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G +IR+Y P V D R N+ S VL+G++ + + A Sbjct: 298 GDRSERIRTYNF-PQGRVTDHRINLTLYSLGKVLEGEIQELVDAL 341 >gi|225430898|ref|XP_002276037.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 454 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 135/355 (38%), Positives = 206/355 (58%), Gaps = 3/355 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +S + + + L+ L K D W + +A+ + + + I + + Sbjct: 91 ISERAEEIRASAGLQQLEEELAALEMKAADSSFWDDRAKAQETLLALTDVKDKIKLLTDF 150 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSNDAYLE 120 + ++ D +++L E D + ++ + LLSG D A + Sbjct: 151 KTQVEDAETIVKLTEEMDSIDTGLLEEAANIIKELNKALDRFELTQLLSGPYDKEGAVIS 210 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + AGAGGT++QDWA+MLLRMY RW EK+++KT +E GEEAGIKSAT+ ++G AYG+ Sbjct: 211 ITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSMGEEAGIKSATIELEGRYAYGY 270 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAG 239 L GE+G HR+VR SP+++ R TSFS + V P+ ++S+++EI E D I RA G G Sbjct: 271 LSGEKGTHRIVRQSPFNAKGLRQTSFSGVEVMPLLPEESMDVEIPEEDLEISFSRAGGKG 330 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ+VN ++AVRITHIPTGV V+C +ERSQ NK +A + L+AKL + ++R Sbjct: 331 GQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQI 390 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG+QIR+YV PY++VKD+RT E + + V+DG+L+ F+KA L K Sbjct: 391 RGDAVKAEWGQQIRNYVFHPYKLVKDVRTGYETSDITSVMDGELEPFIKAYLKFK 445 >gi|300741817|ref|ZP_07071838.1| peptide chain release factor 2 [Rothia dentocariosa M567] gi|300381002|gb|EFJ77564.1| peptide chain release factor 2 [Rothia dentocariosa M567] Length = 375 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 138/361 (38%), Positives = 213/361 (59%), Gaps = 11/361 (3%) Query: 4 SRQLNCLGGLF-------DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56 S ++ L ++ D + L L+ + P LW + A+ + H + Sbjct: 7 SAEIKDLRSIYASIVAVSDLEGIKCALEDLSQQASAPELWDDPEHAQRVTSALSHKQAEL 66 Query: 57 SFIKEIQDRLCDNLILLELALEEDDCSILQ---ETSDNLQRIKLEVEYKQFESLLSGEAD 113 + + + R+ D +++ELA ED+ S E + ++ +++ + LLSGE D Sbjct: 67 NRLTNLASRIDDVEVMVELAQTEDESSKEDLLAEAEAECKELRKKLDELEVLVLLSGEYD 126 Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 +A + + +GAGG ++ D+A MLLRMY RWAEK + T+ L+ EEAG+KS T + Sbjct: 127 QREAVVTIRSGAGGVDAADFAEMLLRMYLRWAEKNGYPTKVLDTSYAEEAGLKSVTFEVN 186 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 P A+G L E G HRLVRISP+D+ RR TSF+++ V P+++ + +EI ES+ ++D + Sbjct: 187 APYAFGRLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDALEIPESEIKVDVF 246 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 R+SG GGQ VNTTDSAVR+THIPTG+VV Q E+SQ +N+A A +L+++L L ++ + Sbjct: 247 RSSGPGGQSVNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLMLRQEQED 306 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + WG Q+RSYVL PYQMVKDLRT E+ + S VLDG L+ F++ + Sbjct: 307 AKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYEEGNTSSVLDGGLNRFIEEGIRW 365 Query: 354 K 354 + Sbjct: 366 R 366 >gi|114567903|ref|YP_755057.1| peptide chain release factor 1 [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|119361631|sp|Q0AUB8|RF1_SYNWW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|114338838|gb|ABI69686.1| bacterial peptide chain release factor 1 (bRF-1) [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 355 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 115/347 (33%), Positives = 182/347 (52%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ ++ L P + + + L + L + ++ +E + E+ Sbjct: 5 LDSLEEKYDELTHLLSQPEVLSDQARFQKLAKAHSALSDIVTMYREYKSLSRQLEDSKEM 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 +EE+D Q +D + +++ + + L D +E+ AG GG E+ Sbjct: 65 LVEEEDEEFRQMLADEIPQLQEKKASLEQELRILLLPQDPNDEKSVIMEIRAGTGGEEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AE++ +K E ++ H + GIK ++ G AY LK E GVHR+ Sbjct: 125 LFAGDLFRMYSRYAEEQGWKIEIMDTHYTDIGGIKEIVFVVDGRGAYSKLKFESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ V P + +E+ I +D RID Y +SG GGQ VNTT SAVR Sbjct: 185 RIPVTESGGRIHTSAATVAVLP-EAEEVEVAIDPNDLRIDVYCSSGPGGQSVNTTQSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG VV CQ E+SQHKNKA+A +LRA+L EL +++ + + K ++G G Sbjct: 244 ITHVPTGEVVTCQDEKSQHKNKAKALRVLRARLKELLEEEKNAE--MAGTRKNQVGSGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ VL+G L++ + A +A + Sbjct: 302 SERIRTYNF-PQGRVSDHRINLTLHRLESVLEGRLEEIINALIAHYQ 347 >gi|317121004|ref|YP_004101007.1| bacterial peptide chain release factor 1 (bRF-1) [Thermaerobacter marianensis DSM 12885] gi|315590984|gb|ADU50280.1| bacterial peptide chain release factor 1 (bRF-1) [Thermaerobacter marianensis DSM 12885] Length = 381 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 111/346 (32%), Positives = 181/346 (52%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R L + DP + + + L +ER L+ + + ++ D L Sbjct: 30 LAARIGRFDQLERELADPAVAADPRRWQPLAQERAELEPLVDAYRRWREAGADLEAARAL 89 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQF----ESLLSGEADSNDAYLEVHAGAGGTESQ 131 E DD + ++R++ E + + L D D +E+ AG GG E+ Sbjct: 90 LRETDDADEHAYLTAEVERLEAERQRLERTLRSLLLPRDPRDQRDVIMEIRAGTGGEEAA 149 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R+AE++ ++TE + + + G K + G A+ LK E GVHR+ Sbjct: 150 LFAGDLFRMYQRYAERQGWRTEVMAATESDLGGFKEVVFAVSGRGAFSRLKHESGVHRVQ 209 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P + +E++I D IDT+ ASG GGQHVN T+SAVR Sbjct: 210 RVPVTEAAGRIHTSTATVAVLP-EAEEVEVQIDPDDLEIDTFAASGPGGQHVNKTESAVR 268 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH PTG+VV CQ ERSQHKN+A+A +LRA+L + ++++E + + ++++G G + Sbjct: 269 ITHKPTGIVVTCQDERSQHKNRARAMKILRARLLDYYTRRQQEE--LSQQRRSQVGTGER 326 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y + V D R + +++DGDLD+ + A A Sbjct: 327 SEKIRTYNFR-ENRVTDHRIGLTLYRLQEIMDGDLDELLDALAAHD 371 >gi|242239290|ref|YP_002987471.1| peptide chain release factor 1 [Dickeya dadantii Ech703] gi|242131347|gb|ACS85649.1| peptide chain release factor 1 [Dickeya dadantii Ech703] Length = 361 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 117/337 (34%), Positives = 179/337 (53%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + DP + ++ +ML RE L + + Q D L Sbjct: 9 LEALQERHEEVQALLGDPSIISDMDRFRMLSREYAQLTDITRCFQRWQQAQDDIATAEML 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ + +E + + L D +LE+ AG GG E+ +A Sbjct: 69 LDDPEMREMAQDELKEAREAGDTLEQQLKVLLLPRDPDDERGCFLEIRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + DGE G K + G AYG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESRRWRVEMVSASDGEHGGYKEVIAKVIGEGAYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P V ++ +I+ D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPEVPEAELPDINPVDLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLAARIRAAEMQKRQQE--EASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 IR+Y P V D R N+ + ++G LD ++ Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEAIEGKLDMLIQ 342 >gi|255547508|ref|XP_002514811.1| peptide chain release factor, putative [Ricinus communis] gi|223545862|gb|EEF47365.1| peptide chain release factor, putative [Ricinus communis] Length = 458 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 135/354 (38%), Positives = 207/354 (58%), Gaps = 3/354 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 S ++ + Q ++ L +K + W + A+ + + + I + E + Sbjct: 97 SERVEEIRTSAGLQQLEQEVTNLESKAANTSFWDDRATAQETLLALTDVKDKIKLLTEFK 156 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSNDAYLEV 121 ++ D +++L E D + + +E + LLSG D A + + Sbjct: 157 TKVEDAETIVKLTEEMDSIDTGLLEEASSIIKELNKSLERFELTQLLSGPYDKESAVISI 216 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGGT++QDWA+MLLRMY RW EK+++KT +E GEEAGIKSA + ++G AYG+L Sbjct: 217 TAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSAMIEVEGRYAYGYL 276 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGG 240 GE+G HR+VR SP+++ R TSFS I V P+ ++S+++E+ E D I RA G GG Sbjct: 277 SGEKGTHRIVRQSPFNAKGLRQTSFSGIEVMPLLPEESMDVELPEEDLEISFSRAGGKGG 336 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q+VN ++AVRITHIPTGV V+C +ERSQ NK +A + L+AKL + +++R Sbjct: 337 QNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAVEQRASEIKQIR 396 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG+QIR+YV PY++VKD+RT E + + V+DG+L+ F+KA L K Sbjct: 397 GDAVKAEWGQQIRNYVFHPYKLVKDVRTGYETSDVTSVMDGELEAFIKAYLKYK 450 >gi|160940109|ref|ZP_02087454.1| hypothetical protein CLOBOL_04998 [Clostridium bolteae ATCC BAA-613] gi|158436689|gb|EDP14456.1| hypothetical protein CLOBOL_04998 [Clostridium bolteae ATCC BAA-613] Length = 358 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 116/351 (33%), Positives = 190/351 (54%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D+ + L DP + Q+ LM+E+ L + K+ + D Sbjct: 1 MFDKLDDMLIHYEELMLMLGDPDVTQDTKRFTRLMKEQADLAPIVEAYKQYKQAKQDVED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127 L L EE D + + + L + +E + E D + LE+ AGAGG Sbjct: 61 SLALLEEESDEEMREMAKEELSDARKRIEDLEHELKILLLPKDPNDDKNIILEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+ +A+ +++K E + +++ G K ++ G AY LK E GV Sbjct: 121 DEAALFAAELYRMYSNYADSQRWKVEIVSLNENGIGGFKEVVAMVTGKGAYSKLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + ++++I +DCRID RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVMP-EAEEVDVQIDMNDCRIDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+V+ Q E+SQ +NK +A+ +LR+KLY++EL+KR+ ++ E +++IG Sbjct: 240 SAVRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDIELEKRQ--SSEAEERRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++GD+ + + +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLYKIDSIMNGDIQELLDNLIAADQ 347 >gi|330828582|ref|YP_004391534.1| peptide chain release factor 2 [Aeromonas veronii B565] gi|328803718|gb|AEB48917.1| Peptide chain release factor 2 [Aeromonas veronii B565] Length = 300 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 155/297 (52%), Positives = 209/297 (70%), Gaps = 1/297 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + I + + D +L+ LA+E +D E ++++ ++ +F + SG+ D + Sbjct: 2 VGTIDTLTQGVDDVEMLVSLAVEGEDEETFNEAIAESEQLEAKLVDLEFRRMFSGQHDGS 61 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 D Y+++ +G+GGTE+QDWANM+LRMY RW + +K E +E +G+ AGIKSAT+ G Sbjct: 62 DCYIDIQSGSGGTEAQDWANMVLRMYLRWGDAHGYKPELIECSEGDVAGIKSATIKFTGE 121 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A+GWL+ E GVHRLVR SP+DS RRHTSF S++VYP +DD I+IEI+ +D RID YRA Sbjct: 122 YAFGWLRTETGVHRLVRKSPFDSGGRRHTSFCSVFVYPEIDDDIDIEINPADLRIDVYRA 181 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVN T+SAVRITH+PTGVVVQCQ +RSQHKNK Q L+AKLYELE+QK+ Sbjct: 182 SGAGGQHVNRTESAVRITHVPTGVVVQCQNDRSQHKNKDQCMKQLKAKLYELEIQKQNAE 241 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 242 KQALEETKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQSVLDGDLDKFIEASLK 297 >gi|312877708|ref|ZP_07737662.1| peptide chain release factor 2 [Caldicellulosiruptor lactoaceticus 6A] gi|311795509|gb|EFR11884.1| peptide chain release factor 2 [Caldicellulosiruptor lactoaceticus 6A] Length = 316 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 162/307 (52%), Positives = 216/307 (70%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M++ + L + I +++ + D +L EL+L+E + + +E L ++ ++E + E Sbjct: 1 MQKIKRLKDKIERFQKLYSQWEDLKVLTELSLDEGNHEMAEELEKELLDLERKIEDFKIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL+G D N+A L +HAGAGGTE+QDWA MLLRMYTRWA K+ +K E L+I GEEAGI Sbjct: 61 VLLNGPYDKNNAILSIHAGAGGTEAQDWAEMLLRMYTRWAVKKGYKVETLDILPGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ T+ I G NAYG+LK E+GVHRLVRISP+D+ RRHTSF+++ V P V+D +IEI E Sbjct: 121 KNVTVRIVGENAYGYLKAEKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D IDT+RASGAGGQHVN T+SAVRI HIPTG+VV CQ ERSQHKN+ A +L+AKL Sbjct: 181 EDLEIDTFRASGAGGQHVNKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLL 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 EL+ ++R E + +TEIGWG QIRSYV PY +VKD RT E + V+DG++D Sbjct: 241 ELKEKERREKIQKLKGEQTEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDV 300 Query: 346 FMKATLA 352 F+ A L Sbjct: 301 FINAYLK 307 >gi|23100453|ref|NP_693920.1| peptide chain release factor RF-1 [Oceanobacillus iheyensis HTE831] gi|32171555|sp|Q8EM60|RF1_OCEIH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|22778686|dbj|BAC14954.1| peptide chain release factor RF-1 [Oceanobacillus iheyensis HTE831] Length = 356 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 104/351 (29%), Positives = 180/351 (51%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68 + D + R + LN DP + + + + +E+ L++ + +E + ++L D Sbjct: 1 MLDRLQSLEDRYNKLNEMLSDPEVINDSKKLREYSKEQSGLEDVVQAYREYKEVTEQLND 60 Query: 69 NLILLELALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 ++E L+++ +++ R + + L D + ++E+ AGG Sbjct: 61 AKEMMEDKLDDEMYEMVKAEIAELNGRKEELESSMKILLLPKDPNDDKNVFMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE + +K + +E G K +I G + Y LK E G Sbjct: 121 DEAALFAGDLYRMYSRYAEHQGWKIDVMEASSTGVGGYKEVIFMINGSDVYSKLKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P ++ + D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEAEEVEVEV-HDKDIRVDTFASSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+VV Q E+SQ KNK +A +LRA++Y+ ++E A E+ K+ +G Sbjct: 240 SAVRLTHVPTGIVVSIQDEKSQIKNKEKAMKVLRARIYDKF--QQEAQAEYDENRKSAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + ++ G LD+F+ A + ++ Sbjct: 298 SGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQIMQGKLDEFIDALVMEEQ 347 >gi|146329088|ref|YP_001209002.1| peptide chain release factor 1 [Dichelobacter nodosus VCS1703A] gi|146232558|gb|ABQ13536.1| peptide chain release factor 1 [Dichelobacter nodosus VCS1703A] Length = 365 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 113/333 (33%), Positives = 175/333 (52%), Gaps = 7/333 (2%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 +R LN DP + + + +E L + +EI+ + L EL + Sbjct: 15 ICERYEELNALLADPSVAADPDLLRRYGQEHAQLAPIVEIFQEIEHLQQEANDLKELEDD 74 Query: 79 EDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 + + ++ + + + D + +LE+ AG GG E+ +A L Sbjct: 75 AEMAEYVAAEQSENLKKTEECEQKLARLMIPQDPLDEANIFLEIRAGTGGDEAAIFAGDL 134 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 +RMY R+AE R ++ L + GE G + + G Y LK E G HR+ R+ + Sbjct: 135 MRMYARFAENRGWQISVLSENAGEFGGYREIICRVSGQRVYSTLKFESGAHRVQRVPETE 194 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 ++ R HTS +++ V P D+ +IEI+ +D R+DT+RASGAGGQHVN TDSA+RITH+PT Sbjct: 195 ASGRIHTSAATVAVLPESDEIEDIEINPADLRVDTFRASGAGGQHVNKTDSAIRITHLPT 254 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314 G+VV+CQ+ERSQHKN+A+A L AKL + +++ I K+ +G G +IR+ Sbjct: 255 GIVVECQEERSQHKNRAKAMRWLYAKLMD--RERQAAEKEIAAERKSLVGTGDRSERIRT 312 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 Y P V D R N+ + DVL+G LD + Sbjct: 313 YNY-PQGRVTDHRINLTLYALDDVLNGQLDLLV 344 >gi|224536533|ref|ZP_03677072.1| hypothetical protein BACCELL_01408 [Bacteroides cellulosilyticus DSM 14838] gi|224521789|gb|EEF90894.1| hypothetical protein BACCELL_01408 [Bacteroides cellulosilyticus DSM 14838] Length = 371 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 130/358 (36%), Positives = 208/358 (58%), Gaps = 11/358 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L D + ++ +T+ P W + A+ M++ + L I+ EI Sbjct: 10 IKERTEALYRYLDIEGKKIQVEEEQLRTQAPGFWDDQKTAEAQMKKVKGLQQWIAGYNEI 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + + D+ +E + + + ++ + +++L EAD D L+++ Sbjct: 70 KTLSDELQLAFDFYK--DELVTEEEIDEAYAKASVAIDELELKNMLRDEADQMDCVLKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDWA+ML+RMY R+AE +K + +G+EAGIK+ T+ I G AYG+LK Sbjct: 128 SGAGGTESQDWASMLMRMYLRYAETNGYKAVISNLQEGDEAGIKTCTIEISGDYAYGYLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVR+SPY++ +R TSF+S++V P+VDD+IE+ I+ ++ DT+R+SGAGGQ+ Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVNINVANISWDTFRSSGAGGQN 247 Query: 243 VNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 VN +S VR+ + ++++ + R Q KN+ A LR+ LY+ ELQ R Sbjct: 248 VNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMA 307 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ K +I WG QIRSYV + VKD RTN + + + V+DG +D F+KA L Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYLM 364 >gi|332978486|gb|EGK15198.1| peptide chain release factor RF1 [Psychrobacter sp. 1501(2011)] Length = 362 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 116/347 (33%), Positives = 178/347 (51%), Gaps = 10/347 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V R + DP + + + L E L S + + D LE+ Sbjct: 9 LDQMVDRFEEVTALLSDPGTISDNNKFRELSMEHSELSEITSLWQRYRQAETDKQDALEM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + ++ + E L D A+LE+ AG GG E+ Sbjct: 69 INEASDPEMKAMMQEEIDSAADDIAAMEEELNVMMLPKDPNDKVPAFLEIRAGTGGDEAA 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 ++ L RMY R+A + + E L ++GE G K + G + YG LK E G HR+ Sbjct: 129 IFSGDLFRMYERYASSQGWTIEVLSANEGEHGGYKEIITRVSGNDVYGRLKFESGAHRVQ 188 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS ++ V P V +E++ +D R+DT+R+SGAGGQHVNTTDSAVR Sbjct: 189 RVPETESQGRVHTSACTVAVMPEVKIDDTVELNPADIRMDTFRSSGAGGQHVNTTDSAVR 248 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTGVV +CQQERSQHKN+A+A ML A++ + ++Q++ + A+ + +G G Sbjct: 249 LTHIPTGVVAECQQERSQHKNRAKAMQMLIARIQQAKVQEQVDTADAL--RRNLVGSGDR 306 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ +++GDLD+ + A + Sbjct: 307 SERIRTYNF-PQGRMTDHRINLTLYKLDAIMEGDLDELLDALTREHQ 352 >gi|255525833|ref|ZP_05392762.1| peptide chain release factor 1 [Clostridium carboxidivorans P7] gi|255510476|gb|EET86787.1| peptide chain release factor 1 [Clostridium carboxidivorans P7] Length = 358 Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats. Identities = 114/347 (32%), Positives = 187/347 (53%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L+ K DP + + E + L +E L+ + ++ + + E+ Sbjct: 5 LEFIENKYEELSAKISDPSIMADQKEWQKLCKEHAELETLVIKYRQYRKAEEELESNKEM 64 Query: 76 ALEEDDCSILQETSDNLQRIK----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 +E D + ++++ ++ + + L D + ++E+ GAGG E+ Sbjct: 65 LKDETDKDMRDMIQEDIKELEASMDEARQELRILLLPKDPNDDKNVFVEIRGGAGGEEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYTR+AE++ +K E + ++ + G K +IKG AY LK E GVHR+ Sbjct: 125 LFAANLTRMYTRYAERKGWKVETISLNATDIGGFKEIVFMIKGAGAYSRLKYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S+ R HTS +++ V P D +++ I+ +D RID +RASG GGQ VNTTDSAVR Sbjct: 185 RVPDTESSGRIHTSTATVAVLP-EVDDVDLVINANDIRIDVFRASGHGGQCVNTTDSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV CQ E+SQ KNK +A +L+++L+ E + E A I E K+++G G Sbjct: 244 ITHLPTGLVVSCQDEKSQLKNKEKAMKVLKSRLF--ERAEAERSAGIAEDRKSQVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + LDGD+D+ + A + + Sbjct: 302 SERIRTYNY-PQGRVTDHRIGLTLYKLDSYLDGDIDEVIDALITTDQ 347 >gi|323143931|ref|ZP_08078589.1| peptide chain release factor 1 [Succinatimonas hippei YIT 12066] gi|322416295|gb|EFY06971.1| peptide chain release factor 1 [Succinatimonas hippei YIT 12066] Length = 364 Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 107/347 (30%), Positives = 174/347 (50%), Gaps = 9/347 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R + P + + + + L RE L ++ ++ + D + + Sbjct: 9 LESLCERHQEVEQLLSQPEIIADQEKFRELNREYSRLQVMVNTFQDYKRAADDLEEMQAM 68 Query: 76 ALEEDDCSILQETSDNLQRIKL---EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 +D+ + + Q L + D + +LE+ AG GG E+ Sbjct: 69 LEGDDEDMKAMAQEELEPTKEKAAALEHELQLLLLPHDDRDDCNCFLEIRAGTGGDEAAL 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY ++ E + ++ E + +GE G K + G AYG++K E G HR+ R Sbjct: 129 FAGELYRMYAKYCEAKGWQLEVVSQSEGEVGGYKEIIAKLSGEGAYGYMKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P + S E++ +D RIDT+RASGAGGQH+N TDSA+RI Sbjct: 189 VPATEAQGRVHTSACTVMVLPEIPPSKAPEVNPADLRIDTFRASGAGGQHINKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQ 311 THIPTG+VV+CQ ERSQH+N+ +A +L ++L ++E KR S G + Sbjct: 249 THIPTGIVVECQDERSQHRNRERAMEVLLSRLAKMEEDKRLAEQTEARHSILSSGDRSDR 308 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD----DFMKATLAIK 354 IR+Y P V D R N+ S+VL+G+LD ++ A + Sbjct: 309 IRTYNF-PQSRVTDHRINLTLYRLSEVLEGNLDLILKPVIEEYQAEQ 354 >gi|284047800|ref|YP_003398139.1| peptide chain release factor 1 [Acidaminococcus fermentans DSM 20731] gi|283952021|gb|ADB46824.1| peptide chain release factor 1 [Acidaminococcus fermentans DSM 20731] Length = 358 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 108/354 (30%), Positives = 180/354 (50%), Gaps = 15/354 (4%) Query: 13 LFD----WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 +F+ + R L K DP + E + L ++ +E + + Sbjct: 1 MFENLDKLQDLEDRYLDLEAKISDPEVIARQEEWLKYTKAHAKLTEIVTVYREYKKLVDT 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAG 124 + +D + + +Q ++ +E + L D + +E+ AG Sbjct: 61 WKDDEAIVKAREDQELTAMAEEEMQELQPRLEAYEEKLTLLLLPRDPNDEKNIIMEIRAG 120 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG E+ +A L RMYTR+AE++ +K E ++ G K ++ G + Y +K E Sbjct: 121 AGGDEAALFAGDLFRMYTRYAEQKGWKVELMDSSPTGLGGFKEVVFMVSGTDVYSHMKFE 180 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ +S R HTS ++ V P ++IE++ +D R+DTYRA GAGGQ+VN Sbjct: 181 SGVHRVQRVPDTESQGRVHTSTVTVAVMP-EAQEVDIELNPADIRVDTYRAGGAGGQYVN 239 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T+SAVR+THIPTG+V QCQ E+SQ KN+ + +LR+++ E E +K+ A K+ Sbjct: 240 KTESAVRMTHIPTGIVAQCQDEKSQAKNREKCLRVLRSRILEAEQEKQR--AATAAERKS 297 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 ++G G +IR+Y P V D R + D+++GDLD+ + A + ++ Sbjct: 298 QVGTGDRSERIRTYNY-PQGRVTDHRIGLTLHKLPDIINGDLDELLDALMMAEQ 350 >gi|319404230|emb|CBI77823.1| peptide chain release factor RF-2 [Bartonella rochalimae ATCC BAA-1498] Length = 317 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 214/309 (69%), Positives = 257/309 (83%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ+L+++++ + L + + L+ + EE+D I+ E + ++++K E++ KQ E Sbjct: 2 MRERQNLEDSMNSTQLFTQMLEECIELIAMGEEENDVEIITEAENTIRQLKSEIDKKQIE 61 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEADSND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+ K K E LE HDGEEAGI Sbjct: 62 TLLSGEADSNDTYLEVHAGAGGTESQDWASMLLRMYTRWAEQHKMKVEILETHDGEEAGI 121 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+L+KG NAYG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPVVD++IE+++SE Sbjct: 122 KSATILVKGYNAYGLLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVVDENIEVDLSE 181 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKNKA AW+MLRA+LY Sbjct: 182 SDVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNKATAWSMLRARLY 241 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE N E+ KTEIGWG QIRSYVLQPYQ+VKDLRT +E P VL+GDLD Sbjct: 242 EEELKKREEATNAVEAFKTEIGWGHQIRSYVLQPYQLVKDLRTGVENADPQTVLNGDLDT 301 Query: 346 FMKATLAIK 354 F++A LA + Sbjct: 302 FIEAALAQR 310 >gi|255319517|ref|ZP_05360731.1| peptide chain release factor 1 [Acinetobacter radioresistens SK82] gi|262378460|ref|ZP_06071617.1| peptide chain release factor 1 [Acinetobacter radioresistens SH164] gi|255303457|gb|EET82660.1| peptide chain release factor 1 [Acinetobacter radioresistens SK82] gi|262299745|gb|EEY87657.1| peptide chain release factor 1 [Acinetobacter radioresistens SH164] Length = 362 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 112/339 (33%), Positives = 172/339 (50%), Gaps = 7/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + L RE L + + D + Sbjct: 9 LDQLSDRYEELTALLADAEVISDNKRFRKLSREHSDLTEITEVWAKYRQAEADIETAEAM 68 Query: 76 ALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + QE + I+ + D+N AYLE+ AG GG E+ ++ Sbjct: 69 LSDPDFKEMAQEEIRENRALIESLESQLNILMIPKDPNDANAAYLEIRAGTGGDEAAIFS 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+++AE ++ E L ++GE G K + G YG +K E G HR+ R+ Sbjct: 129 GDLFRMYSKYAESCGWRLEILSENEGEHGGYKEIICRVDGDGVYGRMKFESGAHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P VD ++I+ +D RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 189 ATESQGRVHTSACTVAILPEVDVDTTVDINPADLRIDTYRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG VV+CQ+ERSQHKNKA+A ++L ++L ++ + + E + +G G + Sbjct: 249 IPTGTVVECQEERSQHKNKAKAMSLLVSRLENA--KRAAQESATSEMRRDLVGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P + D R N+ +++GDL++ + + Sbjct: 307 IRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLNELLDSL 344 >gi|84394465|ref|ZP_00993179.1| peptide chain release factor 1 [Vibrio splendidus 12B01] gi|84374906|gb|EAP91839.1| peptide chain release factor 1 [Vibrio splendidus 12B01] Length = 362 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 121/346 (34%), Positives = 181/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R + DP + N + + L +E L+ K Q D E+ Sbjct: 9 LETLVERYEEVQHLLGDPGVLGNQDKFRALSKEYSQLEEVTGCFKSYQQAQEDLEAAEEM 68 Query: 76 ALEEDDCSILQETS---DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 A E+D D I+ + Q + D + +LE+ AGAGG E+ Sbjct: 69 ANEDDAEMREMAQEEIKDAKANIERLTDELQILLIPKDPNDERNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AEK+ ++ E + + E+ G K I G YG +K E G HR+ R Sbjct: 129 FAGNLFRMYSRFAEKKGWRVEVMSSNVSEQGGFKEMIAKISGDAVYGTMKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P + ++ EI D +IDT+RASGAGGQHVNTTDSA+RI Sbjct: 189 VPETESQGRVHTSACTVAVMPEIPEADLPEIKAGDLKIDTFRASGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG VV+CQ ERSQHKNKA+A +L A++ + E ++R A I ++ + +G G Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERR--AAAISDTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ ++VL+GD+ + L + Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTIYRLNEVLEGDMQSLLDPVLQEHQ 351 >gi|332881782|ref|ZP_08449430.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680421|gb|EGJ53370.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 370 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 129/358 (36%), Positives = 204/358 (56%), Gaps = 11/358 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L D +N ++ +T+ P W + A+ M++ + L I KE+ Sbjct: 10 VKTRTEALYRYLDIENKKIQVEEEQLRTQAPGFWDDAKAAEEQMKKVKGLQKWIDGYKEV 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + + ++ +E R +E + ++L E D DA L+++ Sbjct: 70 KTLCDELELAFDFYK--EEMVTEEEVDGLYGRTVDALEDLELRNMLRQEEDPMDAVLKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDWA+ML+RMY RWAE +K DG+EAGIK+ T+ I+G AYG+LK Sbjct: 128 SGAGGTESQDWASMLMRMYMRWAESHGYKCTVSNYQDGDEAGIKTVTMQIEGEFAYGYLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVR+SPY++ +R TSF+S++V P+VDDSIE+ + S D +R+ GAGGQ+ Sbjct: 188 SENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVYVDPSRVSWDLFRSGGAGGQN 247 Query: 243 VNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 VN ++ VR+ + ++++ + R Q +N+ A +L+++LY+ LQKR+ Sbjct: 248 VNKVETGVRLRYQYKDPDTGEEEEILIENTESRKQLENRENAMRLLKSQLYDRALQKRKA 307 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ K +I WG QIRSYV + VKD RTN + + + V+DG LD F+K+ L Sbjct: 308 KQAEIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGKLDGFIKSYLM 364 >gi|297582072|ref|ZP_06943991.1| peptide chain release factor 1 [Vibrio cholerae RC385] gi|297533767|gb|EFH72609.1| peptide chain release factor 1 [Vibrio cholerae RC385] Length = 362 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 115/346 (33%), Positives = 180/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72 ++ V+R + DP + + + + L +E L+ + Q D + Sbjct: 9 LESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + E E I+ + Q L D + +LE+ AGAGG E+ Sbjct: 69 AQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AEK+ ++ E + + E G K + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P + ++ EI SD +IDT+R+SGAGGQHVNTTDSA+RI Sbjct: 189 VPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E KR I ++ + +G G Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAE--ISDTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ ++V++GD+ + + + Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTVYRLTEVMEGDMQSLVDPVIHEHQ 351 >gi|78484734|ref|YP_390659.1| peptide chain release factor 1 [Thiomicrospira crunogena XCL-2] gi|119361633|sp|Q31IN8|RF1_THICR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|78363020|gb|ABB40985.1| bacterial peptide chain release factor 1 (bRF-1) [Thiomicrospira crunogena XCL-2] Length = 363 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 107/342 (31%), Positives = 175/342 (51%), Gaps = 9/342 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +N V+RL +N DP + N + + L +E L + + D ++ Sbjct: 9 LENLVERLDEVNHLISDPEIINNQNKFRNLTKEHSQLTPVVETFNQFIQNQGDLQEAKDM 68 Query: 76 ALEEDDC-SILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGTESQD 132 D + + + + + + D + +LE+ AG GG E+ Sbjct: 69 IKSGDPDLKEMGQEELPELEKQQATLEAELQKMLLPKDPNDDANIFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE +++ E + +GE G K I G AY LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAETMRWQVEVINSQEGEHGGYKEIIARIIGDGAYSRLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ + P D +I+++ +D ++DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPATETQGRVHTSAATVVIMPEAQDVEQIDLNPADLKVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG VV+CQ ERSQHKN+A+A ++L +++ + ++R I + K+ +G G Sbjct: 249 THIPTGTVVECQDERSQHKNRARAMSLLASRIMD--ERQRIHDQEIAQERKSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R N+ +++ G L + + Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLDEIMQGGLQQVVDPLI 347 >gi|53717070|ref|YP_105275.1| peptide chain release factor 1 [Burkholderia mallei ATCC 23344] gi|67639917|ref|ZP_00438745.1| peptide chain release factor 1 [Burkholderia mallei GB8 horse 4] gi|121597849|ref|YP_990282.1| peptide chain release factor 1 [Burkholderia mallei SAVP1] gi|124382410|ref|YP_001024781.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10229] gi|126447218|ref|YP_001079120.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10247] gi|251768001|ref|ZP_04820356.1| peptide chain release factor 1 [Burkholderia mallei PRL-20] gi|254175822|ref|ZP_04882481.1| peptide chain release factor 1 [Burkholderia mallei ATCC 10399] gi|254203239|ref|ZP_04909601.1| peptide chain release factor 1 [Burkholderia mallei FMH] gi|254208574|ref|ZP_04914923.1| peptide chain release factor 1 [Burkholderia mallei JHU] gi|254355790|ref|ZP_04972069.1| peptide chain release factor 1 [Burkholderia mallei 2002721280] gi|61214592|sp|Q62DF3|RF1_BURMA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223532|sp|A3MFT4|RF1_BURM7 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223533|sp|A2RYL2|RF1_BURM9 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223534|sp|A1UWC9|RF1_BURMS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|52423040|gb|AAU46610.1| peptide chain release factor 1 [Burkholderia mallei ATCC 23344] gi|121225647|gb|ABM49178.1| peptide chain release factor 1 [Burkholderia mallei SAVP1] gi|124290430|gb|ABM99699.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10229] gi|126240072|gb|ABO03184.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10247] gi|147746284|gb|EDK53362.1| peptide chain release factor 1 [Burkholderia mallei FMH] gi|147751261|gb|EDK58329.1| peptide chain release factor 1 [Burkholderia mallei JHU] gi|148024761|gb|EDK82944.1| peptide chain release factor 1 [Burkholderia mallei 2002721280] gi|160696865|gb|EDP86835.1| peptide chain release factor 1 [Burkholderia mallei ATCC 10399] gi|238520529|gb|EEP83988.1| peptide chain release factor 1 [Burkholderia mallei GB8 horse 4] gi|243061104|gb|EES43290.1| peptide chain release factor 1 [Burkholderia mallei PRL-20] Length = 360 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 115/346 (33%), Positives = 177/346 (51%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72 D RL+ LN ++ ++ + + L RE + + + + D L Sbjct: 9 LDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQEL 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L A D + + D + ++E+ AG GG ES Sbjct: 69 LADASMRDFAEDELRGARDRMGRLAAELQTMLL--PKDPNDERNIFVEIRAGTGGDESAL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A LLRMY R+AE+++++ E + + G K + I G AY LK E G HR+ R Sbjct: 127 FAGNLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+ Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ ++DGDLD+ + A ++ + Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVSEHQ 349 >gi|328752610|gb|EGF66226.1| peptide chain release factor 2 [Propionibacterium acnes HL025PA2] Length = 370 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 152/353 (43%), Positives = 221/353 (62%), Gaps = 3/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L+ + + D + ++ L + P+LW + A+ + L I ++ + Sbjct: 16 LDASLSSIENVLDPEAKKAEIADLERQVAVPNLWGDQENAQRVTSRLSALQAEIERLERL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +LLE A +D S+ + T +++ E++ + +LLSG+ D +A + + Sbjct: 76 RARIEDVHVLLEFAAADDKESLAEAT-TETVKLREEIDALEVRTLLSGQYDEREAVVTIR 134 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A MLLRMY RW+E+ +K E L+ EEAGIKSAT ++ P AYG L Sbjct: 135 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 194 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ ++I ESD R+D + ASG GGQ Sbjct: 195 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 254 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A +L+AKL E +++E N +S Sbjct: 255 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSE 314 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRTN E + V DGD+DDF+ A + ++ Sbjct: 315 GN--SWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 365 >gi|86148712|ref|ZP_01066989.1| peptide chain release factor 1 [Vibrio sp. MED222] gi|218708755|ref|YP_002416376.1| peptide chain release factor 1 [Vibrio splendidus LGP32] gi|254790907|sp|B7VKH3|RF1_VIBSL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|85833505|gb|EAQ51686.1| peptide chain release factor 1 [Vibrio sp. MED222] gi|218321774|emb|CAV17730.1| Peptide chain release factor 1 [Vibrio splendidus LGP32] Length = 362 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 120/346 (34%), Positives = 181/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R + DP + N + + L +E L+ K Q D E+ Sbjct: 9 LETLVERYEEVQHLLGDPDVLGNQDKFRALSKEYSQLEEVTGCFKSYQQAQEDLEAAEEM 68 Query: 76 ALEEDDCSILQETS---DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 A E+D D I+ + Q + D + +LE+ AGAGG E+ Sbjct: 69 ANEDDAEMREMAQEEIKDAKANIERLTDELQILLIPKDPNDERNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AEK+ ++ E + + E+ G K I G YG +K E G HR+ R Sbjct: 129 FAGNLFRMYSKFAEKKGWRVEVMSSNVSEQGGFKEMIAKISGDAVYGTMKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P + ++ EI D +IDT+RASGAGGQHVNTTDSA+RI Sbjct: 189 VPETESQGRVHTSACTVAVMPEIPEADLPEIKAGDLKIDTFRASGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG VV+CQ ERSQHKNKA+A +L A++ + E ++R A I ++ + +G G Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERR--AAAISDTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ ++VL+GD+ + L + Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTIYRLNEVLEGDMQSLLDPVLQEHQ 351 >gi|194290876|ref|YP_002006783.1| peptide chain release factor 1 [Cupriavidus taiwanensis LMG 19424] gi|238692779|sp|B3R722|RF1_CUPTR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|193224711|emb|CAQ70722.1| peptide chain release factor RF-1 [Cupriavidus taiwanensis LMG 19424] Length = 360 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 115/344 (33%), Positives = 175/344 (50%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +RL +N N+ + + L RE L + + D L Sbjct: 9 LDQLAERLDEVNALLAREDATANIDQYRKLSREHAELSPVAEQYSQYRQAQDDLATAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + + + Q L D + LE+ AG GG ES +A Sbjct: 69 LDDPEMKDFAADEIAAARDRLEALQASLQRLLLPKDPNDDRNLLLEIRAGTGGEESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE+++++ E + + + G K + I G A+ LK E G HR+ R+ Sbjct: 129 ADLLRMYTRYAERQRWQVEVMSESESDLGGYKEVIIRIAGDAAFSRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQHVN TDSAVR+TH Sbjct: 189 ATEAQGRIHTSACTVAVMPEADEVGEVEINPADLRIDTFRASGAGGQHVNKTDSAVRLTH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQH+NK +A +L A++ + +Q R A + + IG G + Sbjct: 249 LPTGIVVECQDDRSQHRNKDKAMKVLAARIKD--MQTRAAQAREASTRRNLIGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ ++DGD+D+ + A A + Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKIDMIMDGDMDELLSALSAEHQ 349 >gi|189464495|ref|ZP_03013280.1| hypothetical protein BACINT_00837 [Bacteroides intestinalis DSM 17393] gi|189438285|gb|EDV07270.1| hypothetical protein BACINT_00837 [Bacteroides intestinalis DSM 17393] Length = 371 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 130/358 (36%), Positives = 207/358 (57%), Gaps = 11/358 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L D + ++ +T+ P W + A+ M++ + L I+ EI Sbjct: 10 VKERTEALYRYLDIEGKKIQVEEEQLRTQAPGFWDDQKAAEAQMKKVKGLQQWIAGYNEI 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + + D+ +E + + ++ + +++L EAD D L+++ Sbjct: 70 KTLSEELQLAFDFYK--DELVTEEEIDEAYAKASTAIDELELKNMLRDEADQMDCVLKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDWA+ML+RMY R+AE +K + +G+EAGIK+ T+ I G AYG+LK Sbjct: 128 SGAGGTESQDWASMLMRMYLRYAETNGYKAVISNLQEGDEAGIKTCTIEISGDYAYGYLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVR+SPY++ +R TSF+S++V P+VDD+IE+ I+ ++ DT+R+SGAGGQ+ Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVNINVANISWDTFRSSGAGGQN 247 Query: 243 VNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 VN +S VR+ + ++++ + R Q KN+ A LR+ LY+ ELQ R Sbjct: 248 VNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMA 307 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ K +I WG QIRSYV + VKD RTN + + + V+DG +D F+KA L Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYLM 364 >gi|152980137|ref|YP_001351903.1| peptide chain release factor 1 [Janthinobacterium sp. Marseille] gi|166223564|sp|A6SUF6|RF1_JANMA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|151280214|gb|ABR88624.1| RF-1 peptide chain release factor [Janthinobacterium sp. Marseille] Length = 360 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 119/344 (34%), Positives = 177/344 (51%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +RL LN N+ + + RE L ++ + D + Sbjct: 9 LDQLTERLDELNVLLMQEDATSNMDNYRKMTREHAELGPLVALYGNYRQADSDIQDAQGM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D QE R++ Q L D + +LE+ AG GG E+ +A Sbjct: 69 LSDPDMKEFAQEEIAAAKTRMEQLEIDLQKMLLPKDPNDDRNIFLEIRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY+R+AE+ +++ E + E G K + I G AY LK E G HR+ R+ Sbjct: 129 GDLLRMYSRFAERNRWQIEMVSESASEVGGYKEVIVRIIGFGAYSKLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ + P D+ ++ I+ +D RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 189 ATETQGRIHTSACTVAIMPEADEVEDVNINPADLRIDTYRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV+CQ +RSQHKNKA A +L A++ +++L RE+ + + K+ IG G + Sbjct: 249 IPTGIVVECQDDRSQHKNKASALKVLAARIKDVQL--REQQSKEAATRKSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++DGDL + A A + Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYKLDFIMDGDLTELTNALAAEHQ 349 >gi|313764090|gb|EFS35454.1| peptide chain release factor 2 [Propionibacterium acnes HL013PA1] gi|314914951|gb|EFS78782.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA4] Length = 370 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 152/353 (43%), Positives = 221/353 (62%), Gaps = 3/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L+ + + D + ++ L + P+LW + A+ + L I ++ + Sbjct: 16 LDASLSSIENVLDPEAKKAEIADLERQGAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + R+ D +LLE A +D S+ + T +++ E++ + +LLSG+ D +A + + Sbjct: 76 RARIEDVHVLLEFAAADDKESLAEAT-TETVKLREEIDALEVRTLLSGQYDEREAVVTIR 134 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 + AGG ++ D+A MLLRMY RW+E+ +K E L+ EEAGIKSAT ++ P AYG L Sbjct: 135 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 194 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQG HRLVRISP+D+ RR TSF+ + V PVV+++ ++I ESD R+D + ASG GGQ Sbjct: 195 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 254 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A +L+AKL E +++E N +S Sbjct: 255 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSE 314 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRTN E + V DGD+DDF+ A + ++ Sbjct: 315 GN--SWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 365 >gi|78778568|ref|YP_396680.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT 9312] gi|78712067|gb|ABB49244.1| bacterial peptide chain release factor 2 (bRF-2) [Prochlorococcus marinus str. MIT 9312] Length = 354 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 138/344 (40%), Positives = 202/344 (58%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 L +FD + L + P W+N AK M + + + + + + D Sbjct: 2 LRIVFDVPRLKAKRRELEQISAQPEFWENQEAAKKQMLILDDVKAQLELLDKWKTFISDA 61 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LEL E + ++ E+ L++++ ++ +FE LL GE D A + + AGAGGT+ Sbjct: 62 NASLELYSLEPEEEMILESQQGLKKLRDNLDKWEFERLLCGEYDKEGAVVSIKAGAGGTD 121 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDW +LLRMY+RWA+ + E+ GEEAGIKS T I G AYG+L+ E+G HR Sbjct: 122 AQDWVEILLRMYSRWADNNQMSLIINELSQGEEAGIKSVTFEIDGKYAYGYLQYEKGTHR 181 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+++N +R TSF+ + V P +DD+I ++I E D I T R+ GAGGQ+VN ++A Sbjct: 182 LVRISPFNANGKRQTSFAGVEVMPKLDDNISLDIPEKDLEITTSRSGGAGGQNVNKVETA 241 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRI H+P+G+ V+C QERSQ +NK +A +L++KL + ++R + E WG Sbjct: 242 VRIVHLPSGISVRCTQERSQLQNKEKAMLLLKSKLLVIAKEQRAAEIADIKGDIVEAAWG 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIR+YV PYQMVKDLRT E VLDG L+ F+ L + Sbjct: 302 NQIRNYVFHPYQMVKDLRTMQETNELDSVLDGGLEPFIHELLRM 345 >gi|89897615|ref|YP_521102.1| hypothetical protein DSY4869 [Desulfitobacterium hafniense Y51] gi|89337063|dbj|BAE86658.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 315 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 152/307 (49%), Positives = 211/307 (68%), Gaps = 1/307 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+E + + +Q +L D L L ++A+EE D S+ E + + ++ ++ + E Sbjct: 2 MQELSYQQEKVKTYYTLQQQLDDLLTLYQMAVEEKDESLEPELEEGILALQQRLDGLELE 61 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LLSG D N+A + +HAGAGGTE+QDW +ML RMY R+ E+ +K E ++ G+EAGI Sbjct: 62 ILLSGPYDRNNAIVTLHAGAGGTEAQDWVSMLYRMYIRYGERHGYKVETMDFLPGDEAGI 121 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEIS 224 KSATL G NA+G+LK E+GVHRLVRISP+D++ RRHTSF+S+ V P ++D+ EI+I Sbjct: 122 KSATLSFAGENAFGYLKAEKGVHRLVRISPFDASGRRHTSFASVDVIPEVMEDNAEIQIP 181 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 D ++DTYRASGAGGQHVN T SAVRITH+PTG+VVQ Q ERSQ +N+A +L+AKL Sbjct: 182 PEDLKVDTYRASGAGGQHVNKTSSAVRITHLPTGIVVQSQSERSQIQNRAYCLRILQAKL 241 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 EL+ +++E+ + + EI WG QIRSYV PY MVKD RTN E + V+DG++D Sbjct: 242 LELKRKQQEDEISEIRGEQQEIAWGSQIRSYVFHPYNMVKDHRTNEETANTGAVMDGEID 301 Query: 345 DFMKATL 351 F+ A L Sbjct: 302 QFIAAYL 308 >gi|85059854|ref|YP_455556.1| peptide chain release factor 1 [Sodalis glossinidius str. 'morsitans'] gi|119361611|sp|Q2NRS4|RF1_SODGM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|84780374|dbj|BAE75151.1| peptide chain release factor RF-1 [Sodalis glossinidius str. 'morsitans'] Length = 360 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 116/337 (34%), Positives = 173/337 (51%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + DP + + I + L +E L + + D L Sbjct: 9 LEALQERREEVEVLLGDPGVISDQIRFRALSKEYAQLSDVTRCFQHWWQVQEDIHTAEHL 68 Query: 76 ALEEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE ++ + Q L D +LEV AG GG E+ +A Sbjct: 69 LQDPEMRDMAQEELLASGASLEQLEQQLQVLLLPRDPDDERGCFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R++K E + GE G K + AYG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAETRRWKVEIVSASYGEHGGFKEVIAKVSHEGAYGLLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ EI+ D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVMPEIPEAELPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A +L A+L E+Q+R++ + + +G G + Sbjct: 249 LPTGLVVECQDERSQHKNKAKALAVLGARLRAAEVQRRQQE--ESSTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 IR+Y P V D R + +V++G LD ++ Sbjct: 307 IRTYNF-PQGRVTDHRIGLTLYRLDEVIEGKLDMLIQ 342 >gi|332140922|ref|YP_004426660.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep ecotype'] gi|332140929|ref|YP_004426667.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep ecotype'] gi|238693241|sp|B4RSV6|RF1_ALTMD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|327550944|gb|AEA97662.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep ecotype'] gi|327550951|gb|AEA97669.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep ecotype'] Length = 361 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 118/346 (34%), Positives = 184/346 (53%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72 ++ V+R + DP + + + + L +E L++ ++ Q + + Sbjct: 9 LEHLVERFEEVQALLGDPEVIGDQDKFRNLSKEFSQLEDVVAGFNAYQQAQENLASAQEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L E +E + I+ Q L D N+ +LE+ AGAGG E+ Sbjct: 69 LNEDDAEMREMAQEEMKEAKGEIERLETELQVLLLPKDPNDDNNCFLEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE R ++ E + ++ E G K + G YG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAESRGWRVELVNANESEHGGYKEVVANVSGDGVYGVLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P + +S IEI+ ++ RIDT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRIHTSACTVAVLPEIPESEAIEINPAELRIDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ ERSQHKN+A+A ++L+A+L ++E + A + K+ +G G Sbjct: 249 THLPTGLVVECQDERSQHKNRAKAMSVLQARLNQIEE--EKRAAEEASTRKSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +V++GDL + L + Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTIYRLDEVVEGDLKQLVDPILQEHQ 351 >gi|189459974|ref|ZP_03008759.1| hypothetical protein BACCOP_00608 [Bacteroides coprocola DSM 17136] gi|189433347|gb|EDV02332.1| hypothetical protein BACCOP_00608 [Bacteroides coprocola DSM 17136] Length = 371 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 131/358 (36%), Positives = 206/358 (57%), Gaps = 11/358 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L D +N ++ +T+ P W + +A+ M++ + L I + Sbjct: 10 VKTRTEALYRYLDIENKKVQVEEEQLRTQAPGFWDDAKKAEAQMKKVKSLQGWIEGYNAV 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + + D+ +E + + +E + +++L EAD D L+++ Sbjct: 70 KTLTDELELAFDFYK--DELVTEEEVDEAYAKSLQALEELELKNMLRSEADQMDCVLKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDW++ML+RMY RWAE +K + +G+EAGIK+ T+ I+G AYG+LK Sbjct: 128 SGAGGTESQDWSSMLMRMYMRWAESNGYKLSVANLQEGDEAGIKTVTMNIEGAYAYGYLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVR+SPY++ +R TSF+S++V P+VDDSIE+ + + DT+R+ GAGGQ+ Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVVVEPARLSWDTFRSGGAGGQN 247 Query: 243 VNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 VN +S VR+ + ++++ + R Q KNK A LR+ LY+ ELQ R E Sbjct: 248 VNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNKENAMRQLRSILYDKELQHRME 307 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ K +I WG QIRSYV + VKD RTN + + + V+DG +D F+KA L Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGKIDGFIKAYLM 364 >gi|160878572|ref|YP_001557540.1| peptide chain release factor 1 [Clostridium phytofermentans ISDg] gi|189039966|sp|A9KHD4|RF1_CLOPH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|160427238|gb|ABX40801.1| peptide chain release factor 1 [Clostridium phytofermentans ISDg] Length = 358 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 113/351 (32%), Positives = 187/351 (53%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ + R + + +P + + + LM+E+ L + E + + Sbjct: 1 MFDKLEDLLIRFQEIQNELNEPTVTNDQARFRKLMKEQNDLGEIVDKYLEYKQTKKNIEE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 LEL EE D + + + L K + + L DS + +E+ GAGG Sbjct: 61 SLELLDEESDEEMRELAKEELSTSKANLVVIEEQLKILLLPKDPNDSKNVIVEIRGGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+++AE ++K + + +++ G K +I G AY LK E GV Sbjct: 121 DEAALFAAELFRMYSKYAETMRWKIDMMNLNENGIGGFKEVIFMINGQGAYSKLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +S R HTS ++ + P + +++E++ +DCR D +R+SG GGQ VNTTD Sbjct: 181 HRVQRIPVTESGGRIHTSTVTVAIMP-EAEEVDVELNMNDCRFDVFRSSGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+V+ CQ E+SQ KN+ +A +LRA+LYELEL+K + K+++G Sbjct: 240 SAVRLTHMPTGIVISCQDEKSQLKNRDKALKVLRARLYELELEK--AHDAEAAARKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P D R + D+++GDL + + + A + Sbjct: 298 TGDRSEKIRTYNF-PQGRCTDHRIKLTSHRLDDIMNGDLQEVIDSLTAADQ 347 >gi|313893571|ref|ZP_07827140.1| peptide chain release factor 1 [Veillonella sp. oral taxon 158 str. F0412] gi|313441842|gb|EFR60265.1| peptide chain release factor 1 [Veillonella sp. oral taxon 158 str. F0412] Length = 360 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 114/348 (32%), Positives = 182/348 (52%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + L + DP + E + L R+ L + + + L +E+ Sbjct: 6 LQVIEDKFMDLEQRISDPEIIARQDEWRKLTRQHSQLSETVETFRTYKKVLAGLDEAMEV 65 Query: 76 ALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 ++ +E + + + E Q L D + +E+ GAGG E+ Sbjct: 66 IEDKSLDEEFREMAQEELKELKPQKEELEEKLQILLLPKDPNDDKNIIIEIRGGAGGDEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMYT++AE + ++ E ++ ++ E G K ++G N Y +K E GVHR+ Sbjct: 126 ALFAGDLFRMYTKYAESQGWRCEIIDANEPELGGFKEVVFSVEGENVYSKMKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS ++ V P + ++IE++E D +IDTYRASGAGGQH+N T+SAV Sbjct: 186 QRVPATETQGRVHTSTVTVAVLP-EMEDVDIEVNEKDLKIDTYRASGAGGQHINKTESAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+VV CQ +RSQ KNK +A +LRAKL + ++E A++ K+++G G Sbjct: 245 RITHLPTGIVVACQDQRSQLKNKDKAMRVLRAKLQD--QAEQEAQASMAADRKSQVGTGD 302 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ VL+GDLD+ ++A A + Sbjct: 303 RSERIRTYNY-PQGRVTDHRINLTLYKLDAVLNGDLDEIIQALNAADQ 349 >gi|332295608|ref|YP_004437531.1| peptide chain release factor 2 [Thermodesulfobium narugense DSM 14796] gi|332178711|gb|AEE14400.1| peptide chain release factor 2 [Thermodesulfobium narugense DSM 14796] Length = 363 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 148/352 (42%), Positives = 223/352 (63%), Gaps = 5/352 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ ++ + D DN +++L + +P +WQ+V ++ L + +L +I + Sbjct: 9 LNERILKIRDCLDLDNKIKKLEEIRNDLSNPEIWQDVQKSSNLTQLADNLQKSIDEWNNL 68 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 D E D E +++ + + +E + ++LLSG+ DS DA L + Sbjct: 69 NSSFED----FLFWTEFQDEGAENEIAESYKNLVKILEELEVKALLSGKYDSYDAMLSIS 124 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++QD+A MLLRMY RW EK K+ E ++ G+EAGI+SAT+ KG +YG+LK Sbjct: 125 AGAGGVDAQDFAEMLLRMYIRWGEKNKYSVELVDQSPGDEAGIRSATIFFKGKYSYGFLK 184 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 EQGVHRL+R+SP+D N+RRHTSF + V P++++ EI + + +I+T+RASGAGGQH Sbjct: 185 SEQGVHRLIRLSPFDFNNRRHTSFVLVEVTPLIENVKEINVKNEEIKIETFRASGAGGQH 244 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN TDSAVRITH+PTG+VV C+ ERSQ +NK A +L ++L L +K+++ + + Sbjct: 245 VNKTDSAVRITHLPTGIVVTCRNERSQFQNKEAAMKILISRLNSLYEEKQKDKMSEFKGE 304 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 T+ WG+QIR+YV+ PY MVKD RTN+E VLDG++D+F KA L + Sbjct: 305 -TDASWGKQIRTYVMHPYTMVKDHRTNVEIGDVYGVLDGNIDEFQKAFLLKE 355 >gi|53720682|ref|YP_109668.1| peptide chain release factor 1 [Burkholderia pseudomallei K96243] gi|76809766|ref|YP_334968.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710b] gi|126440521|ref|YP_001060595.1| peptide chain release factor 1 [Burkholderia pseudomallei 668] gi|126454756|ref|YP_001067845.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106a] gi|134283294|ref|ZP_01769995.1| peptide chain release factor 1 [Burkholderia pseudomallei 305] gi|167721407|ref|ZP_02404643.1| peptide chain release factor 1 [Burkholderia pseudomallei DM98] gi|167740375|ref|ZP_02413149.1| peptide chain release factor 1 [Burkholderia pseudomallei 14] gi|167817592|ref|ZP_02449272.1| peptide chain release factor 1 [Burkholderia pseudomallei 91] gi|167825994|ref|ZP_02457465.1| peptide chain release factor 1 [Burkholderia pseudomallei 9] gi|167847481|ref|ZP_02472989.1| peptide chain release factor 1 [Burkholderia pseudomallei B7210] gi|167896069|ref|ZP_02483471.1| peptide chain release factor 1 [Burkholderia pseudomallei 7894] gi|167904455|ref|ZP_02491660.1| peptide chain release factor 1 [Burkholderia pseudomallei NCTC 13177] gi|167912716|ref|ZP_02499807.1| peptide chain release factor 1 [Burkholderia pseudomallei 112] gi|167920676|ref|ZP_02507767.1| peptide chain release factor 1 [Burkholderia pseudomallei BCC215] gi|217424712|ref|ZP_03456209.1| peptide chain release factor 1 [Burkholderia pseudomallei 576] gi|226198171|ref|ZP_03793742.1| peptide chain release factor 1 [Burkholderia pseudomallei Pakistan 9] gi|237813980|ref|YP_002898431.1| peptide chain release factor 1 [Burkholderia pseudomallei MSHR346] gi|242316197|ref|ZP_04815213.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106b] gi|254190473|ref|ZP_04896981.1| peptide chain release factor 1 [Burkholderia pseudomallei Pasteur 52237] gi|254198514|ref|ZP_04904935.1| peptide chain release factor 1 [Burkholderia pseudomallei S13] gi|254260133|ref|ZP_04951187.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710a] gi|254300725|ref|ZP_04968170.1| peptide chain release factor 1 [Burkholderia pseudomallei 406e] gi|61214599|sp|Q63QF0|RF1_BURPS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361515|sp|Q3JN85|RF1_BURP1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223535|sp|A3NZS4|RF1_BURP0 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223536|sp|A3NE24|RF1_BURP6 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|52211096|emb|CAH37084.1| peptide chain release factor 1 [Burkholderia pseudomallei K96243] gi|76579219|gb|ABA48694.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710b] gi|126220014|gb|ABN83520.1| peptide chain release factor 1 [Burkholderia pseudomallei 668] gi|126228398|gb|ABN91938.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106a] gi|134245489|gb|EBA45582.1| peptide chain release factor 1 [Burkholderia pseudomallei 305] gi|157810508|gb|EDO87678.1| peptide chain release factor 1 [Burkholderia pseudomallei 406e] gi|157938149|gb|EDO93819.1| peptide chain release factor 1 [Burkholderia pseudomallei Pasteur 52237] gi|169655254|gb|EDS87947.1| peptide chain release factor 1 [Burkholderia pseudomallei S13] gi|217392168|gb|EEC32193.1| peptide chain release factor 1 [Burkholderia pseudomallei 576] gi|225929691|gb|EEH25707.1| peptide chain release factor 1 [Burkholderia pseudomallei Pakistan 9] gi|237505256|gb|ACQ97574.1| peptide chain release factor 1 [Burkholderia pseudomallei MSHR346] gi|242139436|gb|EES25838.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106b] gi|254218822|gb|EET08206.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710a] Length = 360 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 115/346 (33%), Positives = 177/346 (51%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72 D RL+ LN ++ ++ + + L RE + + + + D L Sbjct: 9 LDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQEL 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L A D + + D + ++E+ AG GG ES Sbjct: 69 LADASMRDFAEDELRGARDRMGRLAAELQTMLL--PKDPNDERNIFVEIRAGTGGDESAL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A LLRMY R+AE+++++ E + + G K + I G AY LK E G HR+ R Sbjct: 127 FAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+ Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ ++DGDLD+ + A ++ + Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVSEHQ 349 >gi|311109118|ref|YP_003981971.1| peptide chain release factor [Achromobacter xylosoxidans A8] gi|310763807|gb|ADP19256.1| peptide chain release factor 1 [Achromobacter xylosoxidans A8] Length = 360 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 117/344 (34%), Positives = 181/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ RL ++ +P ++ + L RER L+ + D E+ Sbjct: 9 LEHLCHRLIEVDALLAEPETASDMDRFRKLSRERAELEPVVEAFTAFARTEDDLAAAQEM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D S+ ++ + +++ Q L D +LE+ AG GG ES ++ Sbjct: 69 LSDPDLKSMAEDEIKSGRAKLEELEAALQLLLLPRDPNDGRSLFLEIRAGTGGDESALFS 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE+R ++ E + E G K I G AYG LK E G HR+ R+ Sbjct: 129 GDLLRMYTRYAEQRGWRVELMSESASELGGYKEVIARIDGDGAYGRLKFESGAHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ + D+ EI I+ +D RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 189 ATEAQGRIHTSACTVAIMAEADEMSEIVINPNDLRIDTFRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQH+NK +A +L A+L + E ++R+ + K+ IG G + Sbjct: 249 LPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKETRERQ--SKEAAERKSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +++GDL++ A +A + Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKLQQIMEGDLEELTGALIAEHQ 349 >gi|90407674|ref|ZP_01215854.1| peptide chain release factor 1 [Psychromonas sp. CNPT3] gi|90311265|gb|EAS39370.1| peptide chain release factor 1 [Psychromonas sp. CNPT3] Length = 363 Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats. Identities = 111/346 (32%), Positives = 179/346 (51%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R + DP + + + L +E L+ + K Q + D + Sbjct: 9 LEGLVERYEEVQALLGDPATLADQDKYRKLTKEYSQLEVVVLSFKGYQGAVEDLESAKMM 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 ++D + ++ + L D + Y+E+ AGAGG E+ Sbjct: 69 LEDDDPEMQEMAVEEVKEAKATLETLSSELEILLLPKDPNDDRNCYIEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++ + +K++ E + + E+ G K I+G AYG +K E G HR+ R Sbjct: 129 FAGNLFRMYSKYIDSKKWRLEIMNTNASEQGGYKEVIAKIEGEGAYGIMKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P V ++ I I+ +D ++DT+RASGAGGQHVN TDSAVR+ Sbjct: 189 VPETESQGRIHTSACTVVVMPEVPEAEAIVINPADLKVDTFRASGAGGQHVNKTDSAVRL 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG VV+CQ +RSQHKN+AQA ++L+A+L + E +K + ++ + G Sbjct: 249 THIPTGTVVECQDQRSQHKNRAQAMSVLQARLQQAEDEKNHAEEQVI--RRSLVASGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ D+L+G+LD + L + Sbjct: 307 ERIRTYNY-PQGRVSDHRINLTLYCLHDILEGELDALLDPILLEDQ 351 >gi|304317929|ref|YP_003853074.1| peptide chain release factor 1 [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779431|gb|ADL69990.1| peptide chain release factor 1 [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 353 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 123/345 (35%), Positives = 184/345 (53%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L+ K DP +++ E K + +E L+ + +E + L D E+ Sbjct: 5 LKTIEDRYVELSRKLSDPESMKDMDEWKKMAKEHASLEEIVQKYREYKKVLDDIKSTKEI 64 Query: 76 ALEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 +DD + + + + + L D D +E+ AGAGG E+ + Sbjct: 65 IELDDDLKDMAQEELKSLEERENKLLNEIKLLLLPKDPNDEKDVIMEIRAGAGGEEAALF 124 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A L RMYT +AEK+ +K E + + E G K L I G AY LK E GVHR+ RI Sbjct: 125 AYDLFRMYTMYAEKKHWKYEIMSSNATELGGFKEVILNIAGKGAYSRLKFESGVHRVQRI 184 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 ++ R HTS +++ V P + ++IEI+ +D +ID +R+ G GGQ VNTTDSAVR+T Sbjct: 185 PTTEAGGRIHTSTATVAVLP-EVEDVDIEINPNDIKIDVFRSGGHGGQSVNTTDSAVRLT 243 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 HIPTG+V+ CQ ERSQ +N+ +A +LRAKLYE+ +++E+ I + K ++G G Sbjct: 244 HIPTGIVISCQDERSQLQNRERAMKILRAKLYEMAREEKEKE--ISMTRKLQVGTGDRSE 301 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + VLDGDLD+ + A LA + Sbjct: 302 RIRTYNF-PQGRVTDHRIGLTLYKLQMVLDGDLDEIIDALLAEDQ 345 >gi|86156794|ref|YP_463579.1| peptide chain release factor 1 [Anaeromyxobacter dehalogenans 2CP-C] gi|119361506|sp|Q2IMW2|RF1_ANADE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|85773305|gb|ABC80142.1| bacterial peptide chain release factor 1 (bRF-1) [Anaeromyxobacter dehalogenans 2CP-C] Length = 370 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 113/341 (33%), Positives = 187/341 (54%), Gaps = 10/341 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72 + QR L DP + N + + +ER ++ ++ ++ + L D N L Sbjct: 10 LEAIEQRFEELTQLLSDPAVAGNGDRFRKVAKERASIEQTVTALRAYRKLLDDVAGNEAL 69 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L E +E + +++ E + + D D +E+ AGAGG E+ Sbjct: 70 LGDKDPELRELAKEELAQLRPQVEPAEEQLKLYLVPKDPNDEKDVIVEIRAGAGGDEAGL 129 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A ++RMY R+AE+R ++ E ++ G G+K ATL + G Y LK E GVHR+ R Sbjct: 130 FAAEVMRMYVRYAERRGWRVELMDTSGGALGGVKEATLTVSGDAVYSSLKYESGVHRVQR 189 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P + I+++++ +D +D +R++G+GGQ VNTTDSAVR+ Sbjct: 190 VPATEAQGRIHTSTVTVAVMP-EAEEIDVQVNPADVEMDVFRSTGSGGQSVNTTDSAVRL 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH PTG+VV+CQQE+SQ KN+ A MLRAKL+E+E +++ + + K+++G G Sbjct: 249 THKPTGIVVKCQQEKSQLKNRTMAMKMLRAKLFEIEQERQRSARD--ATRKSQVGTGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P + D R N + + V+DGD+ D + A Sbjct: 307 EKIRTYNF-PQDRLTDHRVNYTRHNLPAVMDGDVQDVIDAC 346 >gi|92113653|ref|YP_573581.1| peptide chain release factor 1 [Chromohalobacter salexigens DSM 3043] gi|119361523|sp|Q1QXC6|RF1_CHRSD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|91796743|gb|ABE58882.1| bacterial peptide chain release factor 1 (bRF-1) [Chromohalobacter salexigens DSM 3043] Length = 361 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 104/342 (30%), Positives = 175/342 (51%), Gaps = 9/342 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +R L +P + + + RE L+ I + + D ++ Sbjct: 9 LDGFQERFEELAALLAEPDVIADQARFRDYSREYAELEPLIEAWRSYRRTEDDLEAAEQM 68 Query: 76 ALEEDDCSILQETSDNLQRI---KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + + + + D+++ +LE+ AG GG E+ Sbjct: 69 REDSDPEMRELAEEEWREAQARLEALDADVKRLLVPRDPDDASNVFLEIRAGTGGDEAAL 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AEK ++ E + GE+ G K ++G N Y LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAEKVGWRIEVINASHGEQGGYKELIARVRGDNVYARLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V E+E++ +D R+DT+R+SGAGGQHVNTTDSA+RI Sbjct: 189 VPATESQGRIHTSACTVAVMAEASAVGEVELNSNDLRVDTFRSSGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+P+G+VV+CQ+ERSQHKN+A+A +L A+L + + + + ++ ++ +G G Sbjct: 249 THLPSGLVVECQEERSQHKNRAKAMALLAARLKQSAVDAQRQ--QQADTRRSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P + D R N+ DV+ G+L + + + Sbjct: 307 ERIRTYNF-PQGRITDHRINLTLYKLGDVMAGELGEVIDPLI 347 >gi|326564766|gb|EGE14978.1| peptide chain release factor 2 [Moraxella catarrhalis 46P47B1] Length = 304 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 172/302 (56%), Positives = 221/302 (73%), Gaps = 1/302 (0%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 LD + I + +L D +LELA+E+DD S+L + L VE +F + SGE Sbjct: 2 LDGIVGVIDGLSAKLDDAAAMLELAVEDDDESLLSDVQAELDDALNSVEELEFRRMFSGE 61 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 D+N+ YL++ +G+GGTE+QDWA MLLRMY RW E FK E LE+ +G AGIKSAT++ Sbjct: 62 MDANNCYLDIQSGSGGTEAQDWAQMLLRMYLRWCESHGFKAEVLEVSEGGVAGIKSATIM 121 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 +KG A+GWL+ E GVHRLVR SP+DSN+ RHTSF++++V P +DD+I+I+I+ +D RID Sbjct: 122 VKGDYAFGWLRTEIGVHRLVRKSPFDSNNGRHTSFAAVFVSPEIDDNIDIDINPADLRID 181 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 TYR+SGAGGQHVNTTDSAVRITH PTGVVV CQ ERSQH NK A MLRAKLYELE+QK Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHQPTGVVVACQNERSQHANKDTAMKMLRAKLYELEMQK 241 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R E E SK++IGWG QIRSYVL +KDLRT +E ++ + VL+GDLD F++A+L Sbjct: 242 RMEKQQALEESKSDIGWGSQIRSYVLDD-SRIKDLRTGVETSNTTAVLNGDLDKFIEASL 300 Query: 352 AI 353 Sbjct: 301 KA 302 >gi|312127875|ref|YP_003992749.1| peptide chain release factor 1 [Caldicellulosiruptor hydrothermalis 108] gi|311777894|gb|ADQ07380.1| peptide chain release factor 1 [Caldicellulosiruptor hydrothermalis 108] Length = 355 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 118/343 (34%), Positives = 177/343 (51%), Gaps = 11/343 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ L K DP + E + LM+E +L + +E + L EL Sbjct: 5 LQVIEEKYLELEKKIADPEIISQTQEWQKLMKEHSNLQPIVEKFREYKRILNTIKEAEEL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 + D + + L R K + E + L D + +E+ AGAGG E+ Sbjct: 65 LDTDLDEDFEKLVKEELNRAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAGGEEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AE++ +K E + + + G K +I G AY LK E GVHR+ Sbjct: 125 LFAAELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + +E+EI E D IDT+RA GAGGQHVN T+SAVR Sbjct: 185 RVPVTESGGRIHTSTATVAVLP-EVEDVEVEIREEDLEIDTFRAGGAGGQHVNKTESAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 I H PTG+VV CQ ERSQH N+ +A +LRA+LY+ +++ ++++G G Sbjct: 244 IVHKPTGIVVTCQDERSQHANRDRAMKILRARLYDYYQSIQQKEIE--SQRRSQVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R + VLDG+LD+ + A + Sbjct: 302 SERIRTYNF-PQGRVTDHRIGLTLYKLEQVLDGELDEIIDALI 343 >gi|325527071|gb|EGD04495.1| peptide chain release factor 1 [Burkholderia sp. TJI49] Length = 360 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 117/346 (33%), Positives = 176/346 (50%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72 D RL+ LN ++ ++ + + L RE L + + D L Sbjct: 9 LDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRSDETAAQEL 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L D ++ K D + +LE+ AG GG ES Sbjct: 69 LGDPSMRDFAEDEIRSARERMVRLEVELQKMLL--PKDPNDDRNIFLEIRAGTGGDESAL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A LLRMY R+AE+++++ E + + G K + I G AY LK E G HR+ R Sbjct: 127 FAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+ Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ ++DGDLD+ + A ++ + Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELIGALVSEHQ 349 >gi|323702617|ref|ZP_08114279.1| peptide chain release factor 1 [Desulfotomaculum nigrificans DSM 574] gi|323532436|gb|EGB22313.1| peptide chain release factor 1 [Desulfotomaculum nigrificans DSM 574] Length = 356 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 112/351 (31%), Positives = 184/351 (52%), Gaps = 12/351 (3%) Query: 13 LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F + L + DP + + + K L++ L + ++ + D Sbjct: 1 MFAKLQALEDKFEQLEGQISDPEIIADQAKWKQLVKAHADLTEVVDVFRQYKKVRSDLEE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 + E+ + + ++ + E + L D + +E+ G GG Sbjct: 61 SKLMLEEKLEPDFREMVELEIEELSKRKEELEQKLKILLLPKDPNDEKNVIVEIRGGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE++ ++TE ++ ++ + G K T +++G AY LK E GV Sbjct: 121 EEAALFAGDLFRMYSRFAERKGWRTEIIDANETDLGGFKEITFVVEGKGAYSTLKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + ++IEI+ +D RID + ASG GGQ VNTT Sbjct: 181 HRVQRVPATESGGRIHTSAATVAVLP-EAEEVDIEINPNDIRIDLFCASGPGGQCVNTTQ 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTG+VV CQ E+SQHKNK +A +LRA+L L+ ++E+ I + K+ +G Sbjct: 240 SAVRITHIPTGIVVSCQDEKSQHKNKDKAMRVLRARL--LDKAQQEQQQAIASTRKSMVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + VL+GDLD+ ++A + + Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTLHRLDQVLEGDLDEIIEALITTDQ 347 >gi|161526057|ref|YP_001581069.1| peptide chain release factor 1 [Burkholderia multivorans ATCC 17616] gi|189349228|ref|YP_001944856.1| peptide chain release factor 1 [Burkholderia multivorans ATCC 17616] gi|238687082|sp|A9AJ68|RF1_BURM1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|160343486|gb|ABX16572.1| peptide chain release factor 1 [Burkholderia multivorans ATCC 17616] gi|189333250|dbj|BAG42320.1| peptide chain release factor RF-1 [Burkholderia multivorans ATCC 17616] Length = 360 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 115/346 (33%), Positives = 176/346 (50%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72 D RL+ LN ++ ++ + + L RE L + + D L Sbjct: 9 LDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRSDETAAQEL 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L D ++ K D + ++E+ AG GG ES Sbjct: 69 LADPSMRDFAEEEIRSARERMARLEVELQKMLL--PKDPNDDRNIFVEIRAGTGGDESAL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A LLRMY R+AE+++++ E + + G K + I G AY LK E G HR+ R Sbjct: 127 FAGDLLRMYLRFAERQRWQVEMMSESPSDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+ Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINLADLRIDTFRASGAGGQHINKTDSAVRV 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G Sbjct: 247 THLPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ ++DGDLD+ + A ++ + Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELIGALVSEHQ 349 >gi|332980841|ref|YP_004462282.1| peptide chain release factor 1 (bRF-1) [Mahella australiensis 50-1 BON] gi|332698519|gb|AEE95460.1| bacterial peptide chain release factor 1 (bRF-1) [Mahella australiensis 50-1 BON] Length = 356 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 114/351 (32%), Positives = 190/351 (54%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D D+ +R L+ K DP + + L++E L+ ++ +E ++ + Sbjct: 1 MLDKLDSIEERYEQLSVKISDPEVISQQDMWRKLVKEHSDLEPIVTKYREYKEVVRQKDD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127 +L + E D + + L +K + + E D + +E+ AGAGG Sbjct: 61 VLAMIKETGDAELKELAQQELDELKEREDKLEEELKRLLLPKDPNDERNVIMEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+ +AE R +K E ++ + + GIK ++G AY LK E GV Sbjct: 121 EEAALFAANLFRMYSLYAESRGWKIEVMDSNYTDLGGIKEIVFAVEGKGAYSRLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS +++ V P + +E+EI+ +D RID YR++G GGQ VNTTD Sbjct: 181 HRVQRVPVTEAGGRIHTSTATVAVLP-EAEEVEVEINPNDLRIDVYRSTGHGGQSVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTG+VV CQ E+SQ KNK +A +L+++L L + + E+ A + ++ ++++G Sbjct: 240 SAVRITHIPTGMVVTCQDEKSQLKNKDKAMRVLKSRL--LAIAQAEQDAQLAQTRRSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + L+GD+D+ + A + + Sbjct: 298 TGDRSERIRTYNF-PQGRVTDHRIGLTIYQLEAFLNGDMDEMIDALITADQ 347 >gi|296272007|ref|YP_003654638.1| peptide chain release factor 2 [Arcobacter nitrofigilis DSM 7299] gi|296096182|gb|ADG92132.1| peptide chain release factor 2 [Arcobacter nitrofigilis DSM 7299] Length = 364 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 162/346 (46%), Positives = 225/346 (65%), Gaps = 2/346 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 + + D RL + W +V A + E+ + + +S K+ + L Sbjct: 18 QNIKDILKPDVLKSRLKEIEELESSQDFWNDVETATKIGIEKNRILSKLSKFKKANESLS 77 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L E+ALEE D + + + + + +LS DS++A + +H GAGG Sbjct: 78 GTNELYEMALEEKDEDTFELLHGEAEELDNLIRSTEISVMLSNPDDSSNAIISIHPGAGG 137 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TESQDWA+ML RMY RWAE+ FK E L+ DGEEAG+K + +IKG NAYG+LK E G+ Sbjct: 138 TESQDWASMLYRMYLRWAERMDFKIEVLDYQDGEEAGLKDVSFIIKGENAYGYLKAENGI 197 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVRISP+DSN++RHTSF+S+ V P +DD+I+I + + D RIDTYR+SGAGGQHVN T+ Sbjct: 198 HRLVRISPFDSNAKRHTSFASVMVSPEIDDNIDIVVEDKDIRIDTYRSSGAGGQHVNKTE 257 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SA+RITHI T +VVQCQ +RSQHKNKA A ML+++LYE EL+K++ + + E K+EIG Sbjct: 258 SAIRITHIATNIVVQCQNDRSQHKNKASAMKMLKSRLYEYELEKQQAVKDGVE--KSEIG 315 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYV+QPYQ +KD R+NI ++ +LDGD+ ++ L Sbjct: 316 WGHQIRSYVMQPYQQIKDTRSNIGYSNVEAILDGDITKMIEDVLIA 361 >gi|167838055|ref|ZP_02464914.1| peptide chain release factor 1 [Burkholderia thailandensis MSMB43] Length = 360 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 117/344 (34%), Positives = 181/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D RL+ LN ++ ++ + + L RE + + + + D L EL Sbjct: 9 LDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQEL 68 Query: 76 ALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + ++ R+ Q L D + ++E+ AG GG ES +A Sbjct: 69 LADASMRDFAEDELRGARDRMSRLAAELQTMLLPKDPNDERNIFVEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE+++++ E + + G K + I G AY LK E G HR+ R+ Sbjct: 129 GDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G + Sbjct: 249 IPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++DGDLD+ + A ++ + Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVSEHQ 349 >gi|216335|dbj|BAA01123.1| ORF3 [Bacillus subtilis] Length = 299 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 156/298 (52%), Positives = 202/298 (67%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP W + +A+ ++ E L + ++ K++ + + + +L EE D + E Sbjct: 1 MADPEFWNDQQKAQTVINEANGLKDYVNSYKKLNESHEELQMTHDLLKEEPDTDLQLELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L+ + E + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRW E+R Sbjct: 61 KELKSLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGERRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D I+I+I D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ Sbjct: 181 EVMPEFNDEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 KN+ +A ML+AKLY+ +++++ + + EIGWG QIRSYV PY MVKD R Sbjct: 241 IKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 298 >gi|124004130|ref|ZP_01688976.1| peptide chain release factor 1 [Microscilla marina ATCC 23134] gi|123990200|gb|EAY29699.1| peptide chain release factor 1 [Microscilla marina ATCC 23134] Length = 356 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 121/342 (35%), Positives = 180/342 (52%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN----LI 71 + +R + P Q++ L +E + L+ + E + L + I Sbjct: 5 LEAIKERFDEVGQLIVKPETIQDMDLYTKLTKEYKDLEKVVEKYNEYKIVLENIDTSKEI 64 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L E E + + + E + + DS + LE+ GAGG E+ Sbjct: 65 LSTEKDPEMKEMAKMELEELNPQKEKIEEELKTLLIPKDPNDSKNVILEIRGGAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY R+AEKRK+K E ++ DG G K I G + YG +K E GVHR+ Sbjct: 125 IFAGDLLRMYQRFAEKRKWKFELMDFTDGSSGGFKEVVCSISGEDVYGMMKYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +S+ V P + +E+ I SD R D + +SG GGQ VNTT SAVR Sbjct: 185 RVPATETQGRVHTSAASVAVLP-EMEDVEVNIDPSDVRSDYFCSSGPGGQSVNTTYSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +THIPTG+VV CQ E+SQ KNKA+A +LR+KLYE+EL K++E +G K+ +G G + Sbjct: 244 LTHIPTGIVVSCQDEKSQIKNKAKAMKVLRSKLYEIELSKQQEE--LGAQRKSMVGSGDR 301 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P V D R + +V+DG++ DF+++ Sbjct: 302 SDKIRTYNY-PQGRVTDHRIKYTVHNLPNVMDGEIADFIESL 342 >gi|15617035|ref|NP_240248.1| peptide chain release factor 2 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681787|ref|YP_002468173.1| peptide chain release factor 2 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471489|ref|ZP_05635488.1| peptide chain release factor 2 [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|25299669|pir||F84980 peptide chain release factor 2 [imported] - Buchnera sp. (strain APS) gi|10039100|dbj|BAB13134.1| peptide chain release factor 2 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219624630|gb|ACL30785.1| peptide chain release factor 2 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311087327|gb|ADP67407.1| peptide chain release factor 2 [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 349 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 161/346 (46%), Positives = 238/346 (68%), Gaps = 1/346 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 L G+FD++ R+ ++ + P W I K L +E+ L++ I I EI++ + Sbjct: 3 KILRGIFDYNKKKSRVLEIDLELSSPKTWTEQISIKKLNKEKYLLNSIIQNINEIEENIK 62 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + +I LELA+E D + +E+ +Q+I+ E++ +F + S + D D Y+++ +G+GG Sbjct: 63 EVVIFLELAIETQDNLVFKESLLEIQKIEQEIKKLEFYRMFSKKNDHYDCYIDIQSGSGG 122 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 T++QDW+ MLLRMY RWA+K+ F TE ++ GE GIKS+T+ + G A+GW + E G+ Sbjct: 123 TDAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIKSSTIKVSGEYAFGWFRTETGI 182 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRL+R SP+DS RRHTSFSSI++YP +++ I+I I+ SD RID YRASGAGGQHVN T+ Sbjct: 183 HRLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYSDLRIDVYRASGAGGQHVNRTE 242 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PT +V QCQ RSQHKNK QA +++KLYE++++K++E E +K++I Sbjct: 243 SAVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYEIQMRKKQEEKQKIEQNKSDIT 302 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSY+L +KDLRT +EK VLDGDLDDF++ +L + Sbjct: 303 WGNQIRSYILD-NSKIKDLRTGVEKNHVQSVLDGDLDDFIEQSLIM 347 >gi|238919470|ref|YP_002932985.1| peptide chain release factor 1 [Edwardsiella ictaluri 93-146] gi|259585221|sp|C5B814|RF1_EDWI9 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238869039|gb|ACR68750.1| peptide chain release factor 1, putative [Edwardsiella ictaluri 93-146] Length = 360 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 117/337 (34%), Positives = 178/337 (52%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + + D L Sbjct: 9 LEALQERHEEVQALLGDAGVIADQDRFRALSREYAQLTDVSHCFLAWRQVQDDLTTAEML 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE + E+E + L D D +LEV AG GG E+ +A Sbjct: 69 LDDPEMRDMAQEELKEARGRLAELEQQLQILLLPKDPDDERDCFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +GE G K + G AYG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRIEIMSASEGEHGGYKEVIARVSGDGAYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P V ++ +I+ +D RIDTYR+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPAVPEAELPQINPADLRIDTYRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEIAKRQQE--EASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +R+Y P V D R N+ +V++G LD+ ++ Sbjct: 307 VRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDNLIE 342 >gi|167587636|ref|ZP_02380024.1| peptide chain release factor 1 [Burkholderia ubonensis Bu] Length = 360 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 119/346 (34%), Positives = 180/346 (52%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72 D RL+ LN ++ ++ + + L RE LD + + L D L Sbjct: 9 LDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELDPVVGQYALWRQSLSDEAAAQEL 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L A D ++ + K D + +LE+ AG GG ES Sbjct: 69 LGDASMRDFAEDEIRSARDRMVQLEVELQKMLL--PKDPNDDRNIFLEIRAGTGGDESAL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A LLRMY R+AE+++++ E + + G K + I G AY LK E G HR+ R Sbjct: 127 FAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+ Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G Sbjct: 247 THLPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ ++DGDLD+ + A ++ + Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELIAALVSEHQ 349 >gi|311087834|gb|ADP67913.1| peptide chain release factor 2 [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 349 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 161/346 (46%), Positives = 238/346 (68%), Gaps = 1/346 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 L G+FD++ R+ ++ + P W I K L +E+ L++ I I EI++ + Sbjct: 3 KILRGIFDYNKKKSRVLEIDLELSSPKTWTEQISIKKLNKEKYLLNSIIQNINEIEENIK 62 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + +I LELA+E D + +E+ +Q+I+ E++ +F + S + D D Y+++ +G+GG Sbjct: 63 EVVIFLELAIETQDNLVFKESLLEIQKIEQEIKKLEFYRMFSKKNDYYDCYIDIQSGSGG 122 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 T++QDW+ MLLRMY RWA+K+ F TE ++ GE GIKS+T+ + G A+GW + E G+ Sbjct: 123 TDAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIKSSTIKVSGEYAFGWFRTETGI 182 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRL+R SP+DS RRHTSFSSI++YP +++ I+I I+ SD RID YRASGAGGQHVN T+ Sbjct: 183 HRLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYSDLRIDVYRASGAGGQHVNRTE 242 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PT +V QCQ RSQHKNK QA +++KLYE++++K++E E +K++I Sbjct: 243 SAVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYEIQMRKKQEEKQKIEQNKSDIT 302 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSY+L +KDLRT +EK VLDGDLDDF++ +L + Sbjct: 303 WGNQIRSYILD-NSKIKDLRTGVEKNHVQSVLDGDLDDFIEQSLIM 347 >gi|218131879|ref|ZP_03460683.1| hypothetical protein BACEGG_03501 [Bacteroides eggerthii DSM 20697] gi|317474512|ref|ZP_07933786.1| peptide chain release factor 2 [Bacteroides eggerthii 1_2_48FAA] gi|217986182|gb|EEC52521.1| hypothetical protein BACEGG_03501 [Bacteroides eggerthii DSM 20697] gi|316909193|gb|EFV30873.1| peptide chain release factor 2 [Bacteroides eggerthii 1_2_48FAA] Length = 372 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 132/358 (36%), Positives = 207/358 (57%), Gaps = 11/358 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L D + ++ +T+ P W + A+ M++ + L IS E+ Sbjct: 10 IKERTEALNRYLDIEGKKIQVEEEQLRTQAPGFWDDQKAAEAQMKKVKGLQQWISGYNEV 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + + D+ +E + + VE + +++L EAD D L+++ Sbjct: 70 RILADELQLAFDFYK--DELVTEEEVDEAYAKASAAVEALELKNMLREEADQMDCVLKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDWA+ML+RMY R+AE +K + +G+EAGIK+ T+ I G AYG+LK Sbjct: 128 SGAGGTESQDWASMLMRMYLRYAETHGYKATIANLQEGDEAGIKACTIEIAGDYAYGYLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVR+SPY++ +R TSF+S++V P+VDD+IE+ I+ ++ DT+R+SGAGGQ+ Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVNINVANISWDTFRSSGAGGQN 247 Query: 243 VNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 VN +S VR+ + ++++ + R Q KN+ A LR+ LY+ ELQ R Sbjct: 248 VNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMA 307 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ K +I WG QIRSYV + VKD RTN + + + V+DG +D F+KA L Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFVKAYLM 364 >gi|310779238|ref|YP_003967571.1| bacterial peptide chain release factor 1 (bRF-1) [Ilyobacter polytropus DSM 2926] gi|309748561|gb|ADO83223.1| bacterial peptide chain release factor 1 (bRF-1) [Ilyobacter polytropus DSM 2926] Length = 357 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 113/351 (32%), Positives = 181/351 (51%), Gaps = 11/351 (3%) Query: 13 LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F + V++ L + ++ + + + + KE + D Sbjct: 1 MFGKLEEVVKKHEELTGLLGSSEVIKDPKKLIEYNKALNEITPVVEKYKEYKRYSDDLEF 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 E E D + + + ++ I+ + + L D + +E+ G GG Sbjct: 61 TKESLKVEKDHEMKEMLLEEMRDIEEVLPGLEQELRILLLPKDPNDDKNVIIEIRGGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY R+AE+ K+KTE + + G+K I+G AY LK E GV Sbjct: 121 DEAALFAANLYRMYCRYAERNKWKTEVMSKSEVGVGGLKEIVFSIQGQGAYSKLKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S+ R HTS +++ V P VDD ++EI S+ +IDT+R+SGAGGQHVNTTD Sbjct: 181 HRVQRVPETESSGRIHTSTATVAVLPEVDDVEQVEIKPSELKIDTFRSSGAGGQHVNTTD 240 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+P+GV+V+CQ ERSQ KN+ +A +L KL+E+E++K+ + K ++G Sbjct: 241 SAVRITHLPSGVIVECQDERSQLKNREKAMKVLATKLFEMEIEKQRSEVE--STRKLQVG 298 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P + D R + LDGDL + + A + + Sbjct: 299 TGSRSEKIRTYNY-PQGRITDHRIKLTLHKLDAFLDGDLTEMIDALITFDQ 348 >gi|320335022|ref|YP_004171733.1| peptide chain release factor 2 [Deinococcus maricopensis DSM 21211] gi|319756311|gb|ADV68068.1| Peptide chain release factor 2 [Deinococcus maricopensis DSM 21211] Length = 363 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 146/353 (41%), Positives = 216/353 (61%), Gaps = 6/353 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L +L L D +RL+ L+ + EDP+LW + A+ + +E L Sbjct: 3 ELLEKLAALREYLDIPGKTRRLNELDKELEDPNLWNDQERARRVTQEATTLRRVTEGYAS 62 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + +L++A +++ + + I+ V+ E+L + + A + + Sbjct: 63 LSSDAQGLSEMLDIASDDEK----EMLEEEQASIQQRVDDLYRETLFTMKHSEAPAIIRI 118 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGGTESQDWA ML+RMY RWAE+R FKTE L+ DGE+AGI SA +++G AYG + Sbjct: 119 KSGAGGTESQDWAGMLMRMYIRWAERRGFKTEILDQQDGEQAGITSAEFIVRGDRAYGMM 178 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGG 240 E GVHRLVR+SP+DSN+RRHTSF+S+ + P ++ I+I + +SD R+D YR+ GAGG Sbjct: 179 APEHGVHRLVRVSPFDSNNRRHTSFASVDIVPEVPEEQIDIHVPDSDVRVDVYRSQGAGG 238 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTTDSAVR+TH+PTG++V Q RSQ KN+ A+ +L+ +LY++E++KRE Sbjct: 239 QGVNTTDSAVRVTHLPTGLMVAIQVTRSQIKNREMAFQILKQRLYDIEVKKREAEEMKAR 298 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + I WG QIRSYVL VKD RT + + +VLDGD++++M A L Sbjct: 299 GEQKAIEWGSQIRSYVLDKQ-YVKDHRTGVMRHDTGNVLDGDIEEYMWAGLEW 350 >gi|186477469|ref|YP_001858939.1| peptide chain release factor 1 [Burkholderia phymatum STM815] gi|238691299|sp|B2JHK8|RF1_BURP8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|184193928|gb|ACC71893.1| peptide chain release factor 1 [Burkholderia phymatum STM815] Length = 360 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 117/344 (34%), Positives = 178/344 (51%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D RL+ LN + N+ + + L RE L + + + D EL Sbjct: 9 LDQLTTRLAELNDLLSREDITSNIDQYRKLTREHAELQPVVEQYGLWRQTMNDAATAQEL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + +E + Q L D + +LE+ AG GG ES +A Sbjct: 69 LSDASMKDFAEEEIRASRERMETLESELQKMLLPKDPNDDRNIFLEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE+ +++ E + + + G K + I G AY LK E G HR+ R+ Sbjct: 129 GDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G + Sbjct: 249 LPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ +++GDLD+ + A ++ + Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYRLESIMEGDLDELIAALVSEHQ 349 >gi|254701680|ref|ZP_05163508.1| peptide chain release factor 2 [Brucella suis bv. 5 str. 513] gi|261752232|ref|ZP_05995941.1| peptide chain release factor 2 [Brucella suis bv. 5 str. 513] gi|261741985|gb|EEY29911.1| peptide chain release factor 2 [Brucella suis bv. 5 str. 513] Length = 321 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 202/309 (65%), Positives = 257/309 (83%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ L+++I+ I ++ L D++ L+ + EE D SI+++ ++ +K E++ +Q + Sbjct: 1 MRERQQLEDSINGINHLKQTLNDSVELIAMGEEEGDKSIVEDAEKTIRDLKDEIDRRQID 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LLSGEAD+ND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+ K E +E+H+GEEAGI Sbjct: 61 MLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+L+KG N+YG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+IE++++E Sbjct: 121 KSATILVKGHNSYGMLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE + ++KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG + Sbjct: 241 EEELKKREEATDAANATKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTP 300 Query: 346 FMKATLAIK 354 FM+A L + Sbjct: 301 FMEAALDHR 309 >gi|253997606|ref|YP_003049670.1| peptide chain release factor 1 [Methylotenera mobilis JLW8] gi|253984285|gb|ACT49143.1| peptide chain release factor 1 [Methylotenera mobilis JLW8] Length = 360 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 111/344 (32%), Positives = 180/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 N +RL ++ + N+ + L RE + + + + D + Sbjct: 9 LANLSERLDEIDRLMSSEGITDNMDNYRKLTREHAEITPIVEQYRAFEQTEADINEAQTM 68 Query: 76 ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE + + + Q L D + +LE+ AG GG ES +A Sbjct: 69 LNDPEMKAFAQEEIEAGKAKLEAIEAALQTLLLPKDPNDDKNIFLEIRAGTGGDESGLFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE++ +K E + ++GE G K I+G AY LK E G HR+ R+ Sbjct: 129 GDLYRMYSRYAERQGWKVEVMSANEGEMGGYKEIIAKIEGYGAYSKLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ + P D+ ++ I+ +D RIDT+RASGAGGQH+N TDSAVR+TH Sbjct: 189 DTETQGRIHTSACTVAILPEADEVSDVVINPADVRIDTFRASGAGGQHINKTDSAVRLTH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 PTG+VV+CQ+ RSQH NKAQA+ +L A++ ++ +++ + I K+ IG G + Sbjct: 249 APTGIVVECQEGRSQHANKAQAFAVLAARIKAKQVDEQQ--SKIASERKSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ + +GD+D+ + A A + Sbjct: 307 IRTYNY-PQGRITDHRINLTLYKIDAITEGDMDELIGALAAEHQ 349 >gi|219682342|ref|YP_002468726.1| peptide chain release factor 2 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219622075|gb|ACL30231.1| peptide chain release factor 2 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] Length = 349 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 161/346 (46%), Positives = 238/346 (68%), Gaps = 1/346 (0%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 L G+FD++ R+ ++ + P W I K L +E+ L++ I I EI++ + Sbjct: 3 KILRGIFDYNKKKSRVLEIDLELSSPKTWTEQISIKKLNKEKYLLNSIIQNINEIEENIK 62 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + +I LELA+E D + +E+ +Q+I+ E++ +F + S + D D Y+++ +G+GG Sbjct: 63 EVVIFLELAIETQDNLVFKESLLEIQKIEQEIKKLEFYRMFSKKDDHYDCYIDIQSGSGG 122 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 T++QDW+ MLLRMY RWA+K+ F TE ++ GE GIKS+T+ + G A+GW + E G+ Sbjct: 123 TDAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIKSSTIKVSGEYAFGWFRTETGI 182 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRL+R SP+DS RRHTSFSSI++YP +++ I+I I+ SD RID YRASGAGGQHVN T+ Sbjct: 183 HRLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYSDLRIDVYRASGAGGQHVNRTE 242 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PT +V QCQ RSQHKNK QA +++KLYE++++K++E E +K++I Sbjct: 243 SAVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYEIQMRKKQEEKQKIEQNKSDIT 302 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSY+L +KDLRT +EK VLDGDLDDF++ +L + Sbjct: 303 WGNQIRSYILD-NSKIKDLRTGVEKNHVQSVLDGDLDDFIEQSLIM 347 >gi|303248208|ref|ZP_07334471.1| peptide chain release factor 1 [Desulfovibrio fructosovorans JJ] gi|302490346|gb|EFL50257.1| peptide chain release factor 1 [Desulfovibrio fructosovorans JJ] Length = 357 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 113/350 (32%), Positives = 175/350 (50%), Gaps = 11/350 (3%) Query: 13 LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F ++ ++ L T+ DP + + + L + L + +E + D Sbjct: 1 MFAKLESLERKYVDLETQLSDPAVVGDQERYRKLAKAHADLAEVVEAFREHKRLSRDLEE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 ELA + D ++ + + L D + LE+ AG GG Sbjct: 61 NTELAQDPDPEMRELALAEVRTIREALPELEARLKLLLLPKDPMDEKNILLEIRAGTGGE 120 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMY+R+AE +++K E + + G K I G Y LK E G H Sbjct: 121 EAALFAGDLFRMYSRYAETKRWKVEIMSSSETGSGGFKEVIANISGDKVYSRLKYESGAH 180 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS ++ + P + +++ I +D RID YR+SG GGQ VNTTDS Sbjct: 181 RVQRVPATESQGRIHTSAVTVAIMP-EAEEVDVAIDPNDLRIDVYRSSGPGGQSVNTTDS 239 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+THIPTG+VV CQ E+SQHKNKA+A +LR++L + E +K+ S ++++G Sbjct: 240 AVRVTHIPTGLVVICQDEKSQHKNKAKALKVLRSRLLQAEQEKQRLEQE--ASRRSQVGS 297 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R N+ VL+GDLD+ +A + Sbjct: 298 GDRSERIRTYNF-PQSRVTDHRINLTLYKLEAVLEGDLDELFDGLIAHYQ 346 >gi|326790732|ref|YP_004308553.1| peptide chain release factor 1 [Clostridium lentocellum DSM 5427] gi|326541496|gb|ADZ83355.1| peptide chain release factor 1 [Clostridium lentocellum DSM 5427] Length = 357 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 113/351 (32%), Positives = 171/351 (48%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD V + + + P + + + LM+E L + +E + L Sbjct: 1 MFDQLQELVDKYHIIGDQISQPEVIADQERWQKLMKEHSDLKEIVEKYEEYKATLEAIDE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 L + + D + + L K VE + L D + +E+ GAGG Sbjct: 61 ALMMLDDNLDDDFRELVKEELAENKKRVEPLENEIKLLLLPKDPNDDKNVIMEIRGGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY +AE ++KTE + +++ G K ++KG AY LK E GV Sbjct: 121 DEAALFAAELYRMYCYYAESHRWKTELMSLNENGIGGFKEVIFMVKGQGAYSKLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +S R HTS ++ V P ++ + +D RID RASG GGQ VNTTD Sbjct: 181 HRVQRIPATESGGRIHTSTVTVAVMPEAEELDVQ-LDMNDVRIDVCRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR H+PTG++V CQ E+SQ KNK +A +LR +L++LE K A + K+ +G Sbjct: 240 SAVRALHVPTGLMVYCQDEKSQLKNKEKALKILRTRLFDLEQAK--AHAEMAAEKKSLVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + VLDGDL++ + + + Sbjct: 298 TGDRSERIRTYNF-PQGRVTDHRVGLTLHKLEQVLDGDLEEIISTLTTVDQ 347 >gi|257092416|ref|YP_003166057.1| peptide chain release factor 1 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044940|gb|ACV34128.1| peptide chain release factor 1 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 360 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 117/344 (34%), Positives = 184/344 (53%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ RL L+ +++ E + L RE + ++ + D L++ Sbjct: 9 LEHLTGRLDELDRMLASGDATRDMDEYRRLSREHAEIAPVVALYQIWSRTRSDLAAALDM 68 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + + + + Q L D + +LE+ AG GG ES +A Sbjct: 69 VGDPEMRELAEAEVAASKERLPQIEKDLQKLLLPRDAKDERNVFLEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMYTR+AE+R+++ E + + G + I G + Y LK E G HR+ R+ Sbjct: 129 GNLFRMYTRYAERRRWQVEVISASASDLGGYREIIARIIGSDVYARLKFESGAHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D E++++ +D RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 189 DTEAQGRIHTSACTVAVMPEADALEEVQVNPADIRIDTYRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTGVVV+CQ +RSQHKNKAQA ++L A++ + +Q+RE+ A+I ++ +G G + Sbjct: 249 LPTGVVVECQDDRSQHKNKAQAMSVLVARIRD--MQEREQDASIASERRSLVGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ ++DGDLD+ + A A + Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKIDAIMDGDLDELLGALTAEHQ 349 >gi|206558779|ref|YP_002229539.1| peptide chain release factor 1 [Burkholderia cenocepacia J2315] gi|238693068|sp|B4E6U6|RF1_BURCJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|198034816|emb|CAR50684.1| peptide chain release factor 1 [Burkholderia cenocepacia J2315] Length = 360 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 117/346 (33%), Positives = 175/346 (50%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72 D RL+ LN ++ ++ + + L RE L + + D L Sbjct: 9 LDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRSDEAAAQEL 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L D ++ K D + +LE+ AG GG ES Sbjct: 69 LADPSMRDFAEDEIRSAREGMARLETELQKMLL--PKDPNDDRNIFLEIRAGTGGDESAL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A LLRMY R+AE+++++ E + + G K + I G AY LK E G HR+ R Sbjct: 127 FAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+ Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ ++DGDLD+ + A + + Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELIGALVTEHQ 349 >gi|226942019|ref|YP_002797093.1| PrfA [Laribacter hongkongensis HLHK9] gi|254790885|sp|C1D5R7|RF1_LARHH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|226716946|gb|ACO76084.1| PrfA [Laribacter hongkongensis HLHK9] Length = 359 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 115/344 (33%), Positives = 173/344 (50%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 RL + DP + +++ + L RE L + + D +L Sbjct: 9 LAQLSDRLDEVTGLLGDPDVTRDMDAYRRLTREHAELTPVVEQYLAWRQTEADLASARDL 68 Query: 76 ALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + + + Q Q L D + +LEV AG GG E+ +A Sbjct: 69 LDDPDMKELAEAELSDGQERLAVLELELQKLLLPKDPNDERNIFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE+ +++ E + + + G K I G AY LK E G HR+ R+ Sbjct: 129 ADLFRMYSRYAERNRWQVEIVSASENDLGGFKEVIARIVGFGAYSRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ +E++ +D RIDT+RASGAGGQH+N TDSAVR+TH Sbjct: 189 ATETQGRIHTSACTVAVMPEADELAAVELNPADLRIDTFRASGAGGQHINKTDSAVRVTH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQHKNKA+A +L A++ ++ Q+R K+ IG G + Sbjct: 249 LPTGIVVECQDDRSQHKNKARALAVLAARIQDV--QQRARQQKEAAERKSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ V+DGDL + A A + Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDAVMDGDLAELTDALTAEHQ 349 >gi|242309101|ref|ZP_04808256.1| peptide chain release factor 2 [Helicobacter pullorum MIT 98-5489] gi|239524525|gb|EEQ64391.1| peptide chain release factor 2 [Helicobacter pullorum MIT 98-5489] Length = 364 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 170/350 (48%), Positives = 232/350 (66%), Gaps = 4/350 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + + R+ + T + W++ +A +E++ + + +E Sbjct: 12 ELEIKRQNIEKIMQPSKLEARIKEIETLEQQKEFWEDSKKAGEYQKEKKRCERQLEKFQE 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 L D L E++ +++ + N + +++ + E +LS E DSN+A + Sbjct: 72 ANLALNDAKELFEISSDDEQTLNELFSEANSL--EEQIKKAEIEVMLSDELDSNNAIFTI 129 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 GAGGTESQDWA+ML RMY RWAE+R FK E L+ +G+EAGIK A+ +IKG NAYG+ Sbjct: 130 TPGAGGTESQDWASMLYRMYLRWAERRGFKVELLDYQEGDEAGIKDASFIIKGENAYGYA 189 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HRLVRISP+DSN++RHTSF+S+ V P +DD+IEIEI E D RIDTYRASGAGGQ Sbjct: 190 KVENGIHRLVRISPFDSNAKRHTSFASVQVTPEIDDNIEIEIEEKDLRIDTYRASGAGGQ 249 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+N T+SA+RITHIPTG+VVQCQ +RSQHKNKA A ML++KLYELE QKR E Sbjct: 250 HINKTESAIRITHIPTGIVVQCQNDRSQHKNKATALKMLKSKLYELEAQKRNE--QTSND 307 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K+EIGWG QIRSYVL PYQ +KDLR+NI ++ +LDGD+D ++ L Sbjct: 308 DKSEIGWGHQIRSYVLAPYQQIKDLRSNIAYSNVEAILDGDIDAILEGVL 357 >gi|167031789|ref|YP_001667020.1| peptide chain release factor 1 [Pseudomonas putida GB-1] gi|189039985|sp|B0KNE4|RF1_PSEPG RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166858277|gb|ABY96684.1| peptide chain release factor 1 [Pseudomonas putida GB-1] Length = 360 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 121/346 (34%), Positives = 174/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + RE ++ + KE D L Sbjct: 9 LDILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWCKVQGDLEGAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLE---VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + + Q L D + +LE+ AG GG E+ Sbjct: 69 LKDSDPDLREMAVEEVREAKEQLLTLESQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AEKR ++ E L ++GE G K ++G N YG LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI+ +D R+DTYRASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ+ERSQHKN+A+A + L AKL + +Q I K +G G Sbjct: 249 THLPTGIVVECQEERSQHKNRARAMSWLSAKLND--MQTSAAQNAIASERKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ S D+L G ++ ++ LA + Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYSLDDILSGGVEAVIEPLLAEYQ 351 >gi|293375558|ref|ZP_06621832.1| peptide chain release factor 1 [Turicibacter sanguinis PC909] gi|325836776|ref|ZP_08166243.1| peptide chain release factor 1 [Turicibacter sp. HGF1] gi|292645775|gb|EFF63811.1| peptide chain release factor 1 [Turicibacter sanguinis PC909] gi|325491154|gb|EGC93443.1| peptide chain release factor 1 [Turicibacter sp. HGF1] Length = 354 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 104/350 (29%), Positives = 187/350 (53%), Gaps = 11/350 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68 +F+ + ++R +N DP + ++ + L +E++ L+ ++ E ++ + D Sbjct: 1 MFERLEAILERYEKINEMMADPAIVTDIKKLTELSKEQRGLEETVNVYTEYKNIASSIED 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 + + + E E + R+ + + + D + +E+ AGG Sbjct: 61 LKEMAKDSDPEISEMAEMELEELKPRLPELEQQLEILLIPKDPNDEKNVIVEIRGAAGGD 120 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A+ L RMYT++AE + +K + + + E G+ +I G + + +K E G H Sbjct: 121 EANIFASDLYRMYTKYAELKGWKIQVMNVDYSESGGMSQVEFMISGESVFSHMKYESGAH 180 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS +++ V P + ++IE+S +D R+DT+ +SG GGQ VNTT S Sbjct: 181 RVQRVPATESQGRIHTSTATVLVMP-EAEDVDIEVSMNDIRVDTFCSSGPGGQSVNTTKS 239 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+TH+PTG+VV CQ +SQH+NKA A +L+A++Y+ LQ+R E GE +++IG Sbjct: 240 AVRLTHVPTGIVVSCQDGKSQHENKANALKVLKARIYDSILQERLE--AEGEERRSKIGT 297 Query: 309 GRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G + IR+Y P V D R V++G L+ ++A + ++ Sbjct: 298 GERSEKIRTYNY-PQNRVTDHRIGFTIQQLDRVMEGKLEPVIEALITEEQ 346 >gi|107024140|ref|YP_622467.1| peptide chain release factor 1 [Burkholderia cenocepacia AU 1054] gi|116688534|ref|YP_834157.1| peptide chain release factor 1 [Burkholderia cenocepacia HI2424] gi|170731835|ref|YP_001763782.1| peptide chain release factor 1 [Burkholderia cenocepacia MC0-3] gi|254246465|ref|ZP_04939786.1| Peptide chain release factor 1 [Burkholderia cenocepacia PC184] gi|119361514|sp|Q1BSB1|RF1_BURCA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223531|sp|A0K437|RF1_BURCH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238688554|sp|B1JUS4|RF1_BURCC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|105894329|gb|ABF77494.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia cenocepacia AU 1054] gi|116646623|gb|ABK07264.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia cenocepacia HI2424] gi|124871241|gb|EAY62957.1| Peptide chain release factor 1 [Burkholderia cenocepacia PC184] gi|169815077|gb|ACA89660.1| peptide chain release factor 1 [Burkholderia cenocepacia MC0-3] Length = 360 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 117/346 (33%), Positives = 175/346 (50%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72 D RL+ LN ++ ++ + + L RE L + + D L Sbjct: 9 LDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRSDETAAQEL 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L D ++ K D + +LE+ AG GG ES Sbjct: 69 LADPSMRDFAEDEIRSAREGMARLETELQKMLL--PKDPNDDRNIFLEIRAGTGGDESAL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A LLRMY R+AE+++++ E + + G K + I G AY LK E G HR+ R Sbjct: 127 FAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+ Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ ++DGDLD+ + A + + Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELIGALVTEHQ 349 >gi|311693603|gb|ADP96476.1| peptide chain release factor 1 [marine bacterium HP15] Length = 362 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 117/338 (34%), Positives = 182/338 (53%), Gaps = 9/338 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R ++ D + + + L RE ++ + + Q L D EL Sbjct: 9 LEQLSDRFEEVSALLSDSSIISQQDKFRDLSREFAEIEPIVHCFQAWQHSLDDIEAAREL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN---DAYLEVHAGAGGTESQD 132 A + D + + E + L D N + +LE+ AG GG E+ Sbjct: 69 AKDGDADMREMAEEELQLAEQKSEELDEELQRLMLPKDPNDGKNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY R+AE+R+++ E L +GE G K + G YG LK E G HR+ R Sbjct: 129 FAGDLFRMYLRYAERRRWQVEVLSESEGEHGGFKELIARVAGDGVYGALKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D++ IE++++D R+DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRIHTSACTVAVMPEADEAEAIELNKADLRVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ+ERSQHKN+A+A ++L ++L E ++++ ++ E+ K+ +G G Sbjct: 249 THLPTGIVVECQEERSQHKNRAKALSLLASRLQNAETERQQ--KSMAETRKSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +IR+Y P V D R N+ +V+ GDLD + Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYKLDEVIAGDLDAVV 343 >gi|167620578|ref|ZP_02389209.1| peptide chain release factor 1 [Burkholderia thailandensis Bt4] Length = 360 Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats. Identities = 115/346 (33%), Positives = 176/346 (50%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72 D RL+ LN ++ ++ + + L RE + + + + D L Sbjct: 9 LDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQEL 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L A D + D + ++E+ AG GG ES Sbjct: 69 LADASMRDFAEDELRGARERMSRLAAELQTMLL--PKDPNDERNIFVEIRAGTGGDESAL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A LLRMY R+AE+++++ E + + G K + I G AY LK E G HR+ R Sbjct: 127 FAGDLLRMYLRYAERQRWQVEMMSESASDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+ Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ ++DGDLD+ + A ++ + Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVSEHQ 349 >gi|167764194|ref|ZP_02436321.1| hypothetical protein BACSTE_02578 [Bacteroides stercoris ATCC 43183] gi|167698310|gb|EDS14889.1| hypothetical protein BACSTE_02578 [Bacteroides stercoris ATCC 43183] Length = 372 Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 132/358 (36%), Positives = 206/358 (57%), Gaps = 11/358 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L D + ++ +T+ P W + A+ M++ + L IS E+ Sbjct: 10 IKERTEALNRYLDIEGKKIQVEEEQLRTQAPGFWDDQKAAEAQMKKVKGLQQWISGYNEV 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + + D+ +E + + VE + +++L EAD D L+++ Sbjct: 70 KVLADELQLAFDFYK--DELVTEEEVDEAYAKASAAVEALELKNMLREEADQMDCVLKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDWA+ML+RMY R+AE +K + +G+EAGIK+ T+ I G AYG+LK Sbjct: 128 SGAGGTESQDWASMLMRMYLRYAETHGYKATISNLQEGDEAGIKTCTIEISGDYAYGYLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVR+SPY++ +R TSF+S++V P+VDD+IE+ I ++ DT+R+SGAGGQ+ Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVNIEQARISWDTFRSSGAGGQN 247 Query: 243 VNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 VN +S VR+ + ++++ + R Q KN+ A LR+ LY+ ELQ R Sbjct: 248 VNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMA 307 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ K +I WG QIRSYV + VKD RTN + + + V+DG +D F+KA L Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFVKAYLM 364 >gi|224101237|ref|XP_002312196.1| predicted protein [Populus trichocarpa] gi|222852016|gb|EEE89563.1| predicted protein [Populus trichocarpa] Length = 379 Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 139/354 (39%), Positives = 211/354 (59%), Gaps = 3/354 (0%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 S+++ + Q L+ L +K D LW + +A+ + + + I + E + Sbjct: 15 SQRVEEMRASSGLHLLEQELADLESKAADSSLWDDRAKAQETLLALTDVKDKIKLLAEFK 74 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSNDAYLEV 121 ++ + +++L E D + ++ + LLSG D A L + Sbjct: 75 TKVEEAETIVKLTEEMDSTDAGFLEEATGIIKELNKALDKYELTQLLSGPYDKEGAVLSI 134 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGGT++QDWA+MLLRMY RW EK+++KT+ +E GEEAGIKSAT+ ++G AYG+L Sbjct: 135 TAGAGGTDAQDWADMLLRMYVRWGEKQRYKTKVVESSPGEEAGIKSATVEVEGRYAYGYL 194 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGG 240 GE+G HR+VR SP++S R TSFS + V P+ ++S+++E+ E D I T RA G GG Sbjct: 195 SGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEESMDVELPEEDLEISTSRAGGKGG 254 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q+VN ++AVRITHIPTGV V+C +ERSQ NK +A + L+AKL + ++R Sbjct: 255 QNVNKVETAVRITHIPTGVTVRCTEERSQLSNKIKALSRLKAKLLVIAEEQRASEIKQIR 314 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG+QIR+YV PY++VKD+RT E + + V+DG+LD F++A L K Sbjct: 315 GDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIASVMDGELDPFIRAYLKHK 368 >gi|237740862|ref|ZP_04571343.1| peptide chain release factor 2 [Fusobacterium sp. 4_1_13] gi|229431159|gb|EEO41371.1| peptide chain release factor 2 [Fusobacterium sp. 4_1_13] Length = 331 Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 149/329 (45%), Positives = 218/329 (66%), Gaps = 1/329 (0%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 T + + W + ++ +++ N +S +++ + D +L++ + + Sbjct: 2 EKLTFEENFWSDKRKSSEIIKNMNFEKNIVSRYEKLATEIDDEEVLIDFVESGEASFENE 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 + +K ++E + LL GE D N+A + +H+GAGGTE+ DWA+ML RMY RW Sbjct: 62 -LQTKHKILKSDIEEFEINLLLDGEYDMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCN 120 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + +K L+ +G+ G+KS T L++G NAYG+LK E+GVHRLVRISP+D+N +RHTSF Sbjct: 121 LKGYKVSELDFMEGDSVGVKSVTFLVEGINAYGYLKSEKGVHRLVRISPFDANKKRHTSF 180 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S+ V P VD+++E+EI+ +D RIDTYRASGAGGQHVN TDSAVRITH P+G+VV CQ+E Sbjct: 181 ASVEVVPEVDENVEVEINPADIRIDTYRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKE 240 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQ N+ A ML++KL ELE++K+EE + +++IGWG QIRSYV QPY +VKD Sbjct: 241 RSQLSNRETAMKMLKSKLLELEIKKKEEEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDH 300 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 RTN E + V+DG +DDF+ + L K Sbjct: 301 RTNTEIGNVKAVMDGSIDDFINSYLRWIK 329 >gi|322832986|ref|YP_004213013.1| peptide chain release factor 1 [Rahnella sp. Y9602] gi|321168187|gb|ADW73886.1| peptide chain release factor 1 [Rahnella sp. Y9602] Length = 360 Score = 230 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 114/337 (33%), Positives = 172/337 (51%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + + L RE L + D + Sbjct: 9 LEALQERHEEVQAMLGDAGVIADQDKFRSLSREYSQLTAVSECFLAWRQAQEDLETAEMM 68 Query: 76 ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ + I+ E Q L D +LE+ AG GG E+ +A Sbjct: 69 LDDPEMREMAQDEIKECKANIEELEEKLQVLLLPKDPDDERGCFLEIRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +GE G K I G AYG K E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEMRRWRVEIVSASEGEHGGYKEVIAKISGEGAYGQFKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ EI+ D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVMPEIPEAELPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR+ + + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVAKRQAE--EASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ +V++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTIYRLDEVMEGKLDSLIQ 342 >gi|193214860|ref|YP_001996059.1| peptide chain release factor 1 [Chloroherpeton thalassium ATCC 35110] gi|238692722|sp|B3QYI4|RF1_CHLT3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|193088337|gb|ACF13612.1| peptide chain release factor 1 [Chloroherpeton thalassium ATCC 35110] Length = 358 Score = 230 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 113/352 (32%), Positives = 183/352 (51%), Gaps = 13/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + R + + DP + N + + L +E L + E + Sbjct: 1 MFDQLQSIKDRYKEIEKQLSDPGVISNQDKFRQLNKEYSGLSEIVKAYDEYRKAKDALQQ 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 EL E D + + + +V + L EADS +A +E+ AGAGG Sbjct: 61 SKELLYTESDPEMKELAQADYDEYSEKVPELEQQLKILLLPKEEADSRNAMVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDG-EEAGIKSATLLIKGPNAYGWLKGEQG 186 E+ +A LLRMY R+AE+ +K E L+ ++ G K AT+ + G + YG +K E G Sbjct: 121 DEAALFAADLLRMYQRFAERNGWKCEVLDYNESSGLGGFKEATISLSGDDVYGTMKFESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ ++ R HTS +S+ V P +D I + D ++DTYR+ G GGQ+VN Sbjct: 181 VHRVQRVPETETQGRVHTSAASVAVLPEAEDFDIE-IRKEDLQMDTYRSGGKGGQNVNKV 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 ++AVRITH+P+G+VV CQ+ERSQ +N+ +A MLR+KLY+++L ++++ ++ + Sbjct: 240 ETAVRITHVPSGIVVACQEERSQLQNRERAMKMLRSKLYDIKLAEQQKERADL--RRSMV 297 Query: 307 GWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G + IR+Y P V D R + +LDGDL + ++A + Sbjct: 298 STGDRSAKIRTYNF-PQSRVTDHRIGFTTHALPQLLDGDLFEIIEALRVHDQ 348 >gi|166363701|ref|YP_001655974.1| peptide chain release factor 2 [Microcystis aeruginosa NIES-843] gi|166086074|dbj|BAG00782.1| peptide chain release factor 2 [Microcystis aeruginosa NIES-843] Length = 330 Score = 230 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 140/322 (43%), Positives = 214/322 (66%), Gaps = 1/322 (0%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92 P W N+ A+ ++E +++ + +L D ++EL E D ++L+E +DNL Sbjct: 5 PTFWDNLDTAQKTLQELNECKSSLETYQGWCGQLEDTKAIIELLELESDRTLLEEATDNL 64 Query: 93 QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 ++ +++ + + LL+G D+ A L ++AGAGGT++QDW MLLRMY+RWAEK+ +K Sbjct: 65 THLQHDLDRWELQQLLNGPYDAKGAVLTINAGAGGTDAQDWTEMLLRMYSRWAEKQGYKV 124 Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 EI +G+EAGIKS T+ I G AYG+LKGE+G HRLVRISP+++N +R TSF+ + V Sbjct: 125 TLAEISEGDEAGIKSVTIEIAGTYAYGYLKGEKGTHRLVRISPFNANGKRQTSFAGVEVM 184 Query: 213 PV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P+ DD++ +EI + D I T R+ G GGQ+VN ++AVR+ H+PTG+ V+C QERSQ + Sbjct: 185 PILGDDAVRVEIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAVRCTQERSQLQ 244 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 NK +A +L+AKL + +++ + E WG QIR+YV PYQ+VKDLR+N+E Sbjct: 245 NKEKALALLKAKLLIIAREQQAQAIAEIRGDMVEAAWGNQIRNYVFHPYQLVKDLRSNVE 304 Query: 332 KTSPSDVLDGDLDDFMKATLAI 353 T + V++GDLD F++A L + Sbjct: 305 TTDVTRVMNGDLDSFIEAYLRL 326 >gi|153814569|ref|ZP_01967237.1| hypothetical protein RUMTOR_00783 [Ruminococcus torques ATCC 27756] gi|317501267|ref|ZP_07959471.1| peptide chain release factor 2 [Lachnospiraceae bacterium 8_1_57FAA] gi|145848063|gb|EDK24981.1| hypothetical protein RUMTOR_00783 [Ruminococcus torques ATCC 27756] gi|316897334|gb|EFV19401.1| peptide chain release factor 2 [Lachnospiraceae bacterium 8_1_57FAA] Length = 316 Score = 230 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 149/308 (48%), Positives = 216/308 (70%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+E + L +++ I+++ D ++L+E++ EED +E + LQ+ + E + Sbjct: 1 MKELKGLQDSVKEIEKLYSDYEDMMLLIEMSEEEDSEETAEEIEEELQQFEETFEELRIG 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LL+G D ++A + +HAGAGGTES DW ML RMYTRWAEK+ + E L+ +G+ AG+ Sbjct: 61 TLLTGPYDRDNAIVTLHAGAGGTESCDWTGMLYRMYTRWAEKKGYSIEELDYLEGDVAGV 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K T +KG NAYG+L+ E+GVHRLVRISP++S +R TSF+S V P +++ I+IEI++ Sbjct: 121 KGVTFEVKGENAYGYLRSEKGVHRLVRISPFNSAGKRQTSFASCDVIPDIEEDIDIEIND 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D +IDTYR+SGAGGQH+N T SAVRITH+PTG+VVQCQ ERSQH NK +A ML++KLY Sbjct: 181 DDLKIDTYRSSGAGGQHINKTSSAVRITHLPTGIVVQCQNERSQHMNKDKAMQMLKSKLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ++ Q++ E + +I +G QIRSYV+QPY MVKD RTN E ++ V+DG++D Sbjct: 241 LMKQQEQAEKMSDIRGEVRDINFGNQIRSYVMQPYTMVKDHRTNAEVSNVGGVMDGNIDP 300 Query: 346 FMKATLAI 353 F+ A L+ Sbjct: 301 FINAYLSA 308 >gi|302875888|ref|YP_003844521.1| peptide chain release factor 1 [Clostridium cellulovorans 743B] gi|307689321|ref|ZP_07631767.1| peptide chain release factor 1 [Clostridium cellulovorans 743B] gi|302578745|gb|ADL52757.1| peptide chain release factor 1 [Clostridium cellulovorans 743B] Length = 358 Score = 230 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 126/348 (36%), Positives = 186/348 (53%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L+ K DP + N E + L +E L ++ KE + + D E+ Sbjct: 5 LNFIENKYDELSIKISDPSIMSNQKEWQKLCKEHSDLGIVVNKYKEYKKTIEDIEDNKEM 64 Query: 76 ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + L+E + + E + L D + Y+E+ AGAGG E+ Sbjct: 65 IQDGSLDPELKELASEEIKELEILKNKYEEELRILLLPKDPNDDKNVYVEIRAGAGGEEA 124 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +AN L RMY R+AE + E + I+ + GIK ++IKG AY LK E GVHR+ Sbjct: 125 ALFANNLTRMYARYAETHGCRVETISINPTDLGGIKEIVMMIKGTGAYSKLKYESGVHRV 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S+ R HTS +++ + P D +EIEIS +D RID +RASG GGQ VNTTDSAV Sbjct: 185 QRVPDTESSGRIHTSTATVAIMP-EVDDVEIEISANDLRIDVFRASGHGGQCVNTTDSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+VV CQ E+SQ KNK +A N+L+A+L+E +R A+I E K+++G G Sbjct: 244 RITHLPTGIVVSCQDEKSQLKNKEKALNVLKARLFEKAESER--SASIAEDRKSQVGTGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + LDG +D+ + A + + Sbjct: 302 RSERIRTYNY-PQGRVTDHRIGLTLYKLDSFLDGAIDEVINALITEDQ 348 >gi|291561383|emb|CBL40182.1| bacterial peptide chain release factor 1 (bRF-1) [butyrate-producing bacterium SS3/4] Length = 357 Score = 230 bits (585), Expect = 4e-58, Method: Composition-based stats. Identities = 115/351 (32%), Positives = 189/351 (53%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D+ ++ L + +P + ++ + + LM+E+ L + K+ + D Sbjct: 1 MFDRLDDMLRHYEELMLELNNPSVAEDQRKFRKLMKEQADLAPIVDAYKQYKQAKQDVED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 L L EE D + + + L K +E + L D + +E+ AGAGG Sbjct: 61 SLALLDEESDEEMKELAKEELADAKKRIEELEQELKILLLPKDPNDEKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A+ L RMY +AE + +KTE + + + G+K +I G AY LK E GV Sbjct: 121 DEAALFASELYRMYVHYAESQHWKTEMINVSESGIGGMKEVEFMITGHGAYSKLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ + P ++ + I + D RID RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAIMPEAEEFDVV-IDDKDIRIDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V+ Q E+SQ +NK +A+ +LR+KLY++EL++R+ +++IG Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDMELERRQNE--EAAERRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + ++DGD+ + + + +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLYKIDAIMDGDIQELIDSLIAADQ 347 >gi|229828875|ref|ZP_04454944.1| hypothetical protein GCWU000342_00960 [Shuttleworthia satelles DSM 14600] gi|229792038|gb|EEP28152.1| hypothetical protein GCWU000342_00960 [Shuttleworthia satelles DSM 14600] Length = 357 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 115/351 (32%), Positives = 181/351 (51%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ V R + + +P + + + LM+E+ L + + Q + Sbjct: 1 MFDKLEDLVARYEEIMRQIAEPDIASDGAKFTELMKEQSELAPIVETFRAYQKQKQSIED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 LEL E D + Q + L + E + L D + +E+ GAGG Sbjct: 61 SLELLDAESDEEMRQLAKEELAEARASAEELENQLKVLLLPKDSNDDRNVIIEIRGGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY +AE R + E +E+ + G+K +++G AY LK E GV Sbjct: 121 DEAALFAAEVYRMYRHYAESRGWACEVMELEETGIGGMKKINFMVRGRGAYSTLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P +++ I +D RID RASG GGQ VNTTD Sbjct: 181 HRVQRVPATESGGRIHTSTVTVAVMP-EAQEVDVVIDPADIRIDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+V+ Q E+SQ +NK +A+ +LRAKLY +E+ +++E A+ +IG Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKNKAFALLRAKLYTMEMLRQQEEASAR--RLAQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R N+ +L+GDL + + A +A + Sbjct: 298 SGDRSEKIRTYNF-PQGRVTDHRINLTLYKLDKILNGDLQELLDALMAADQ 347 >gi|28210063|ref|NP_781007.1| peptide chain release factor 1 [Clostridium tetani E88] gi|32171526|sp|Q898Y5|RF1_CLOTE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|28202498|gb|AAO34944.1| bacterial peptide chain release factor 1 [Clostridium tetani E88] Length = 355 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 116/351 (33%), Positives = 201/351 (57%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + + L+ K DP + Q+ E + L +E ++ ++ KE ++ L Sbjct: 1 MLDRLNFIENKYEELSIKISDPTVMQDQKEWQKLCKEHSDMETIVTTYKEYKEVLQSIED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127 E+ E+ + + ++++ ++ V+ + E D + ++E+ AGAGG Sbjct: 61 NKEMLKEDIEQELRDMVQEDIKELEQRVQELEQELKMLLVPKDPNDEKNVFIEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR+AE+ +KTEA+ +++ + G K +++G AY LK E GV Sbjct: 121 DEAALFAANLFRMYTRYAERHNWKTEAVSVNETDIGGFKEIVFMVRGKGAYSRLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S+ R HTS +++ V P + +++EI+++D R+D YRASG GGQ VNTTD Sbjct: 181 HRVQRVPDTESSGRIHTSTATVAVLP-EVEDVDVEINQNDLRVDVYRASGHGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+P+G+VV CQ E+SQ KNK +A +L+++LY++ +R A+I E K+++G Sbjct: 240 SAVRITHLPSGLVVTCQDEKSQLKNKEKAMKVLKSRLYDMLESER--SASIAEDRKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + LDGD+++ + + +++ Sbjct: 298 TGDRSERIRTYNY-PQGRVTDHRIGLTLYKLESFLDGDIEEMIDGLITVEQ 347 >gi|210623300|ref|ZP_03293717.1| hypothetical protein CLOHIR_01667 [Clostridium hiranonis DSM 13275] gi|210153701|gb|EEA84707.1| hypothetical protein CLOHIR_01667 [Clostridium hiranonis DSM 13275] Length = 355 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 119/344 (34%), Positives = 183/344 (53%), Gaps = 11/344 (3%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 L K DP + + + M+E L+ I +E + L E+ E Sbjct: 8 LEDTYKDLTEKISDPEIINDQKVWQKYMKEHADLEPIIMKYREYKAVLDAIAESKEILQE 67 Query: 79 EDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 E D + + L ++ + E + + D + +E+ GAGG E+ +A Sbjct: 68 ESDEELRELAKMELSDMESQVEPLEEELKLLLVPKDPNDEKNVIVEIRGGAGGDEAALFA 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY+R+AE++ +K L ++ G K + +IKG AY LK E GVHR+ RI Sbjct: 128 GDLLRMYSRYAERKGWKVSMLSSNETGVGGYKEVSFMIKGKGAYSRLKYESGVHRVQRIP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P + +E+EI+++D RID +RASG GGQ VNTTDSAVRITH Sbjct: 188 STESGGRIHTSTATVAVLP-EVEDVEVEINDNDIRIDVFRASGNGGQCVNTTDSAVRITH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG VV CQ E+SQ KNK +A +L+A+LY+ L +++ I K+++G G + Sbjct: 247 LPTGEVVSCQDEKSQLKNKEKAMKVLKARLYDRALADQQKE--ISAERKSQVGTGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ LDGD+D+ + A + + + Sbjct: 305 IRTYNF-PQGRISDHRINLTLYKLDSFLDGDIDEMIDALITVDQ 347 >gi|134302701|ref|YP_001122669.1| peptide chain release factor 2 [Francisella tularensis subsp. tularensis WY96-3418] gi|134050478|gb|ABO47549.1| Peptide chain release factor 2 [Francisella tularensis subsp. tularensis WY96-3418] Length = 327 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 167/326 (51%), Positives = 227/326 (69%), Gaps = 5/326 (1%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 + ED +W N A+ L +++ L+N + + I + L + L L E+D S++QE Sbjct: 2 ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLE--TLSELLELGEEDESLMQEI 59 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + + Q + E+E +F + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ Sbjct: 60 AKDTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK ++ DG+ AGIK TL I+G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179 Query: 209 IWVYP--VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +++ P D I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q + Sbjct: 180 VFISPEVDDDIDIDIEINPTDLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSD 239 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQHKN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL +KDL Sbjct: 240 RSQHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIKDL 298 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLA 352 RT +E T+ VLDGDLD F++A+L Sbjct: 299 RTGVENTNTQAVLDGDLDKFIEASLK 324 >gi|110640072|ref|YP_680282.1| peptide chain release factor 1 [Cytophaga hutchinsonii ATCC 33406] gi|119361529|sp|Q11NS4|RF1_CYTH3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|110282753|gb|ABG60939.1| bacterial peptide chain release factor 1 (bRF-1) [Cytophaga hutchinsonii ATCC 33406] Length = 359 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 103/346 (29%), Positives = 180/346 (52%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R + DP++ ++ L +E + L+ + + ++ L + ++ Sbjct: 5 LEAIKSRFDEVAEAILDPNIMSDMKRYASLNKEYKELNKIVEVYAQYKNILDNIESSKKV 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQF----ESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + L+ + ++ + + + DS + LE+ G GG E+ Sbjct: 65 LSVEKDPDFREMAKEELETLAVQKDDIELVIKELLIPKDPNDSKNIILEIRGGTGGDEAS 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A + RMY R+ ++ +K E ++ +G G K I G + YG LK E GVHR+ Sbjct: 125 IFAGDIFRMYQRYCDRMGWKMELIDATEGTSGGYKEIICGISGEDVYGKLKFESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +S+ V P V++ ++ +D R DT+ +SG GGQ VNTT SA+R Sbjct: 185 RVPATETQGRIHTSAASVAVLPEVEELDVQ-LNMNDIRKDTFCSSGPGGQSVNTTYSAIR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +THIP+G VVQCQ E+SQ KN +A +LR+++YE+E +K+++ +G+ + IG G + Sbjct: 244 LTHIPSGTVVQCQDEKSQIKNFEKALKVLRSRIYEIEYKKQQDE--LGKERNSMIGSGDR 301 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P V D R + V+DG++DDF++ + Sbjct: 302 SDKIRTYNY-PQSRVTDHRIGHTVHNLPAVMDGNIDDFIEELRLAE 346 >gi|89073091|ref|ZP_01159630.1| peptide chain release factor 1 [Photobacterium sp. SKA34] gi|89051044|gb|EAR56501.1| peptide chain release factor 1 [Photobacterium sp. SKA34] Length = 362 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 113/339 (33%), Positives = 179/339 (52%), Gaps = 9/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72 + V+R + DP + + + L +E L+ + Q D + Sbjct: 9 LETLVERYEEVQHLLGDPSVLADQNRFRALSKEYSQLEEVTKCFQAYQQAKEDLVAAEEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + E +E + I+ + Q + D + ++E+ AGAGG E+ Sbjct: 69 AQEDDAEMREMAQEEIKEAKAEIERLADELQVLLIPKDPNDDRNCFVEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AE+R ++ E + + E+ G K + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSKYAERRGWRIEIINENRSEQGGYKEMIAKVNGDGAYGILKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P + ++ EI+ D RIDT+R+SGAGGQHVNTTDSA+RI Sbjct: 189 VPATESQGRVHTSACTVAVLPEIPEAEIPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR + + +G G Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRNAE--EASTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +IR+Y P V D R + ++V++GDLD ++ Sbjct: 307 DRIRTYNY-PQGRVSDHRITLTLYRLNEVMEGDLDALIQ 344 >gi|88800296|ref|ZP_01115863.1| peptide chain release factor 1 [Reinekea sp. MED297] gi|88777011|gb|EAR08219.1| peptide chain release factor 1 [Reinekea sp. MED297] Length = 361 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 117/346 (33%), Positives = 168/346 (48%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +R L P + + + +E L+N + D L Sbjct: 9 LTELTERYEELGLLLSQPDVISDQTAFRQYSQEYAELENVVQCFSRYTACEADIEAARGL 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 +ED + + E Q L D + YLEV AG GG E+ Sbjct: 69 LDDEDPDMREMGKDELASAEALREELDEQLQILLLPKDPNDHKNVYLEVRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AEK ++ E L +GE G K + G Y LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAEKMGWRVEVLSASEGEHGGYKEIISRLSGERVYSQLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI ++D R+DT+RASGAGGQHVN TDSA+R+ Sbjct: 189 VPETESQGRIHTSACTVAVMPEADELESIEIDKNDLRVDTFRASGAGGQHVNKTDSAIRL 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ ERSQHKNKA+A ++L AKL + Q+ + K+ +G G Sbjct: 249 THLPTGIVVECQDERSQHKNKARAMSLLAAKLKDA--QESAAAREQADQRKSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +V+ G LD ++ L + Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYKLDEVIGGQLDHIIQPLLQEHQ 351 >gi|82703754|ref|YP_413320.1| peptide chain release factor 1 [Nitrosospira multiformis ATCC 25196] gi|119361568|sp|Q2Y5P3|RF1_NITMU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|82411819|gb|ABB75928.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrosospira multiformis ATCC 25196] Length = 358 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 113/344 (32%), Positives = 177/344 (51%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 RL LN + N+ + + L RER + + D E+ Sbjct: 9 LTQLSVRLEELNRLLSSESITVNLDQYRKLTRERAEIAPVVDLYNAYLQSEQDIHTAQEM 68 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 A E + + + Q + L D + +LE+ AG GG ES +A Sbjct: 69 AAEAEMREFADAEIRDAKERLVRYGAELQKQLLPKDPNDERNIFLEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+AE+++++ E + + G K I G AY LK E G HR+ R+ Sbjct: 129 ADLFRMYARFAERQRWQVEIISQSPSDVGGYKEIIAKISGEGAYSKLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ ++ ++ ++ RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIEDVALNPAELRIDTFRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311 +PTG+VV+CQ RSQHKNKAQA ++L A++ + ++Q+++ + + K+ +G G + Sbjct: 249 LPTGIVVECQDGRSQHKNKAQAMSVLAARIRDKQMQEQQ--SKQAATRKSLVGTGNRSGR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++DGDL++ A LA + Sbjct: 307 IRTYNF-PQGRITDHRINLTLYKIEQIMDGDLNELCSALLAEHQ 349 >gi|325474491|gb|EGC77678.1| peptide chain release factor 2 [Treponema denticola F0402] Length = 320 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 162/306 (52%), Positives = 210/306 (68%), Gaps = 1/306 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M E + L N I +E+ D + D +L+EL+ E + + +E N + + + Sbjct: 1 MGEIKALKNRIYPWQELMDEVSDLEVLMELSEESGNEELSEEIGSNYNSVYEKYKKLSIL 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGE D NDAYL VHAGAGGTE+ DWA ML+RMY RW E R FKTE +++ + E GI Sbjct: 61 SLLSGEVDKNDAYLTVHAGAGGTEACDWAGMLVRMYLRWCESRGFKTETIDVVEAE-GGI 119 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT I G A+G LK E G+HRLVRISP+DSN RRHTSF+S++ +PV+DD+IE++I Sbjct: 120 KSATFQISGEFAFGLLKSETGIHRLVRISPFDSNGRRHTSFTSVFAFPVLDDTIEVDIRP 179 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D RIDTYRA GAGGQHVN TDSAVRITHIPTG+VV CQ +RSQ N+A A N+L+++LY Sbjct: 180 EDLRIDTYRAGGAGGQHVNKTDSAVRITHIPTGIVVACQTQRSQISNRATAMNVLKSRLY 239 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 +++E+ + K I WG QIRSYV QPY MVKD RT E + V+DGD+D+ Sbjct: 240 NYYEEQKEKENMKFAAEKKGISWGNQIRSYVFQPYTMVKDHRTKYETGNIQAVMDGDIDE 299 Query: 346 FMKATL 351 F+ + L Sbjct: 300 FINSFL 305 >gi|325662438|ref|ZP_08151044.1| peptide chain release factor 2 [Lachnospiraceae bacterium 4_1_37FAA] gi|331086228|ref|ZP_08335310.1| peptide chain release factor 2 [Lachnospiraceae bacterium 9_1_43BFAA] gi|325471272|gb|EGC74496.1| peptide chain release factor 2 [Lachnospiraceae bacterium 4_1_37FAA] gi|330406387|gb|EGG85901.1| peptide chain release factor 2 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 316 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 158/309 (51%), Positives = 221/309 (71%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+E + L +++ +E+ + D IL+++A EE+D S+++E L++I+ E + E Sbjct: 1 MKELKSLQDSVKRTEELYRQYEDIQILIDMAYEENDESMIKEIETELKQIESTYEELRIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLS E D ++A + +HAGAGGTE+ DW NML RMY RW E + F TE L+ DG+ GI Sbjct: 61 TLLSEEYDKDNAIVTLHAGAGGTEACDWVNMLYRMYNRWIESKGFTTEVLDYLDGDITGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ T + G NAYG+L+ E+GVHRLVRISP++S ++R TSF+S V P ++D I+IEI+E Sbjct: 121 KTVTFEVNGENAYGYLQSEKGVHRLVRISPFNSANKRQTSFASCDVVPDLEDDIDIEINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 + +IDTYRASGAGGQHVN T SA+R+TH+PTG+VVQCQ ERSQH NK +A ML+AKLY Sbjct: 181 DELKIDTYRASGAGGQHVNKTSSAIRLTHLPTGIVVQCQNERSQHSNKEKAMQMLKAKLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 L+ Q++ E + EIG+G QIRSYV+QPY +VKD RTN E + + VLDG+LD Sbjct: 241 LLKEQEQAEKVSGIRGEVKEIGFGNQIRSYVMQPYTLVKDHRTNEESGNVTSVLDGNLDP 300 Query: 346 FMKATLAIK 354 F+ A L ++ Sbjct: 301 FINAYLKMR 309 >gi|197120814|ref|YP_002132765.1| peptide chain release factor 1 [Anaeromyxobacter sp. K] gi|238689845|sp|B4UAY8|RF1_ANASK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|196170663|gb|ACG71636.1| peptide chain release factor 1 [Anaeromyxobacter sp. K] Length = 370 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 113/341 (33%), Positives = 187/341 (54%), Gaps = 10/341 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72 + QR L DP + N + + +ER ++ ++ ++ + L D N L Sbjct: 10 LEAIEQRFEELTQLLSDPAVAGNGDRFRKVAKERASIEQTVTALRAYRKLLEDVEGNEAL 69 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L E +E + +++ E + + D D +E+ AGAGG E+ Sbjct: 70 LADKDPELRELAKEELAQLRPQVEPAEEQLKLYLVPKDPNDEKDVIVEIRAGAGGDEAGL 129 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A ++RMY R+AE+R ++ E ++ G G+K ATL + G Y LK E GVHR+ R Sbjct: 130 FAAEVMRMYVRYAERRGWRVELMDTSGGALGGVKEATLTVSGDAVYSSLKYESGVHRVQR 189 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P + I+++++ +D +D +R++G+GGQ VNTTDSAVR+ Sbjct: 190 VPATEAQGRIHTSTVTVAVMP-EAEEIDVQVNPADVEMDVFRSTGSGGQSVNTTDSAVRL 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH PTG+VV+CQQE+SQ KN+ A MLRAKL+E+E +++ + + K+++G G Sbjct: 249 THKPTGIVVKCQQEKSQLKNRTMAMKMLRAKLFEIEQERQRSARD--ATRKSQVGTGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P + D R N + + V+DGD+ D + A Sbjct: 307 EKIRTYNF-PQDRLTDHRVNYTRHNLPAVMDGDVQDVIDAC 346 >gi|323343897|ref|ZP_08084124.1| peptide chain release factor RF2 [Prevotella oralis ATCC 33269] gi|323095716|gb|EFZ38290.1| peptide chain release factor RF2 [Prevotella oralis ATCC 33269] Length = 373 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 128/357 (35%), Positives = 208/357 (58%), Gaps = 12/357 (3%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 + + L D D + +T+ P W++ A+ M+ + ++ I KE++ Sbjct: 12 ERADALHRYLDIDRKMVEFEEEQLRTQAPDFWEDPQRAQEQMKLVKGIEKWIKGYKEVRQ 71 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 + + + DD +E + + +E + +++L + D + L++++G Sbjct: 72 YADELQLAFDFY--HDDMVSEEEVDADYAKAIKAIEDLELKNMLRQQEDPMECVLKINSG 129 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PNAYGWLKG 183 AGGTESQDWA ML+RMY RWAE +K + +G+EAGIKS T+ I+G AYG+LK Sbjct: 130 AGGTESQDWAQMLMRMYMRWAEAHGYKVSISNLQEGDEAGIKSVTMEIEGGEYAYGFLKS 189 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR+SP+++ +R TSF+S++V P+VDDSIE+ + + DT+R+ GAGGQ+V Sbjct: 190 ENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDSIEVFVDPARVSWDTFRSGGAGGQNV 249 Query: 244 NTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 N +S VR+ ++ ++++ + R Q KN+A+A +L+++LY+ ++KR E Sbjct: 250 NKVESGVRLRYMYQDPDTGEEEEILIENTETRDQPKNRAKAMLLLKSQLYDRAMKKRLEE 309 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ K +I WG QIRSYV + VKD RTN + + V+DG +DDF+KA L Sbjct: 310 QAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKIDDFIKAYLM 365 >gi|315452804|ref|YP_004073074.1| peptide chain release factor 2 [Helicobacter felis ATCC 49179] gi|315131856|emb|CBY82484.1| peptide chain release factor 2 [Helicobacter felis ATCC 49179] Length = 363 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 160/353 (45%), Positives = 225/353 (63%), Gaps = 3/353 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + + + ++ L+ L + DP WQ+ A +E+ ++ +S + Sbjct: 12 ELENKCQNVAQIIKPESLQDTLTALEREQSDPLFWQDKERAASKNQEKVKIERLLSAYQN 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L + L EL +D ++ Q D ++ V+ + +L+ D DA + + Sbjct: 72 AKNTLVEARELFELVQNDDPSTLAQLFEDA-PHLQACVQSLEVGVMLANAHDGRDAIVSI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 G GG ESQDW +ML RMY RWAE++ FK E L+ +GEEAGIK +I+G N YG++ Sbjct: 131 QPGVGGVESQDWGSMLYRMYLRWAERKGFKVELLDYQEGEEAGIKGVAFIIRGINVYGYM 190 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVR+SP+++N +RHTSF+S+ V P VDD I+I I + D RIDTYRASGAGGQ Sbjct: 191 KNENGVHRLVRMSPFNANGKRHTSFASVQVSPEVDDDIDIVIEDKDIRIDTYRASGAGGQ 250 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SA+RITH+ TG+VVQCQ +RSQHKNKA A ML+++LYELEL +++E Sbjct: 251 HVNKTESAIRITHLATGIVVQCQNDRSQHKNKAMALKMLKSRLYELELHRQKE--QSSAE 308 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+EIGWG QIRSYVL PYQ +KD R+ I ++ +LDGDLD M+A L K Sbjct: 309 EKSEIGWGHQIRSYVLAPYQQIKDARSEIAYSNVEAILDGDLDAMMEAVLVSK 361 >gi|77360001|ref|YP_339576.1| peptide chain release factor 1 [Pseudoalteromonas haloplanktis TAC125] gi|119361581|sp|Q3IK95|RF1_PSEHT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|76874912|emb|CAI86133.1| Peptide chain release factor 1 (RF-1) [Pseudoalteromonas haloplanktis TAC125] Length = 361 Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats. Identities = 119/346 (34%), Positives = 186/346 (53%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72 + V+R + DP + ++ + L +E L+ + Q D + Sbjct: 9 LEILVERYEEVQALLSDPSVIRDQNRFRALSKEYSDLEEVVKTFLSYQQAQQDVISAEEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L+ + + +E + +I + Q L D+N+ YLEV AG GG E+ Sbjct: 69 LKDSDPDIREMAQEEYKEAKAQILTIEDEIQVLMLPKDPKDNNNVYLEVRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE +K+K + + ++GE G K I G +G LK E GVHR+ R Sbjct: 129 FAGDLFRMYSRYAETKKWKVDVVTTNEGEHGGYKEIIANISGEGVFGQLKFESGVHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V V ++ IEI+ +D ++DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRVHTSACTVAVMAEVPEAEAIEINSADLKVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTGVVV+CQ +RSQHKN+A+A ++L A+L + E +KR+ A + +G G Sbjct: 249 THIPTGVVVECQDQRSQHKNRAKAMSVLAARLQQAEDEKRD--AAEASERRNLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ ++V+ GDL ++ + + Sbjct: 307 ERIRTYNY-PQGRITDHRINLTLYRLNEVVAGDLSCIVEPLMQEHQ 351 >gi|303228461|ref|ZP_07315294.1| peptide chain release factor 1 [Veillonella atypica ACS-134-V-Col7a] gi|303230754|ref|ZP_07317501.1| peptide chain release factor 1 [Veillonella atypica ACS-049-V-Sch6] gi|302514514|gb|EFL56509.1| peptide chain release factor 1 [Veillonella atypica ACS-049-V-Sch6] gi|302516963|gb|EFL58872.1| peptide chain release factor 1 [Veillonella atypica ACS-134-V-Col7a] Length = 360 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 112/348 (32%), Positives = 182/348 (52%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + L + DP + E + L R+ L + +E + L +E+ Sbjct: 6 LQVIEDKFMDLEQRISDPEVIARQDEWRKLTRQHAQLSETVEAFREYKKVLAGIDEAMEV 65 Query: 76 ALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 ++ +E + + + E Q L D + +E+ GAGG E+ Sbjct: 66 IEDKTMDEEFREMAQEELKELKPQKEELEEKLQILLLPKDPNDDKNIIIEIRGGAGGDEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMYT++AE + ++ E ++ ++ E G K + G N Y +K E GVHR+ Sbjct: 126 ALFAGDLFRMYTKYAESQGWRCEIIDANEPELGGFKEVVFSVDGENVYSKMKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS ++ V P + ++IEI++ D +IDTYRASGAGGQH+N T+SAV Sbjct: 186 QRVPATETQGRVHTSTVTVAVLP-EMEDVDIEINDKDLKIDTYRASGAGGQHINKTESAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+VV CQ +RSQ +N+ +A +LRAKL + ++E A++ K+++G G Sbjct: 245 RITHLPTGIVVACQDQRSQLQNREKAMRVLRAKLQDKA--EQEATASMAADRKSQVGTGD 302 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +L+GDLD+ ++A A + Sbjct: 303 RSERIRTYNY-PQGRVTDHRINLTLYKLDAILNGDLDEIIQALNAADQ 349 >gi|71892043|ref|YP_277773.1| peptide chain release factor 2 [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796149|gb|AAZ40900.1| peptide chain release factor 2 (RF-2) [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 348 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 161/340 (47%), Positives = 223/340 (65%), Gaps = 2/340 (0%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 +FD+D ++ ++ + + P +W+N AK+L ++ L I+ + ++ L D L Sbjct: 2 IFDYDLKIKHFKIISNELKSPGIWKNPKTAKILRQKSSSLKIFINIVDQLYKNLVDLNDL 61 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 LEL E D+ + + ++ + + + G+ D+++ Y+++ +G+GG E+QD Sbjct: 62 LELTEEYDNILLSEIHD-QSIDLERTLSQLEISRMFIGKYDNSNCYIDIQSGSGGIEAQD 120 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA+MLLRMY RW + + F + +E GE GIKSAT+ + GP AYGWL+ E GVHRLVR Sbjct: 121 WASMLLRMYLRWIDHKGFMADVIEESTGEVTGIKSATIQVIGPYAYGWLRTESGVHRLVR 180 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 SP+DS +RHTSF+S++VYP +DDSI I I D R D YRASGAGGQHVN T+SAVRI Sbjct: 181 KSPFDSAKKRHTSFASVFVYPELDDSINIHIRPEDLRCDVYRASGAGGQHVNRTESAVRI 240 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 THIPT +V QCQ +RSQHKNK QA LRAKLYELELQK+ + ES+K I WG QI Sbjct: 241 THIPTNIVTQCQSDRSQHKNKNQAMKQLRAKLYELELQKKNYEKKMRESNKVNITWGNQI 300 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 RSY+L VKDLRT EK + VL+GDLDDF++ ++ Sbjct: 301 RSYILD-NSRVKDLRTGFEKRNVKAVLNGDLDDFIRISIK 339 >gi|319900327|ref|YP_004160055.1| bacterial peptide chain release factor 2 (bRF-2) [Bacteroides helcogenes P 36-108] gi|319415358|gb|ADV42469.1| bacterial peptide chain release factor 2 (bRF-2) [Bacteroides helcogenes P 36-108] Length = 371 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 132/358 (36%), Positives = 207/358 (57%), Gaps = 11/358 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L D + ++ +T+ P W++ A+ M++ + L IS + Sbjct: 10 IKERTEALNRYLDIEGKKIQVEEEQLRTQAPGFWEDQKAAEAQMKKVKGLQQWISGYNGV 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + + D+ +E + + VE + +++L EAD D L+++ Sbjct: 70 KTLTDEVQLAFDFYK--DELVSEEEVDEAFAKASAAVEALELKNMLREEADQMDCVLKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDWANML+RMY R+AE +K + +G+EAGIK+ T+ I G AYG+LK Sbjct: 128 SGAGGTESQDWANMLMRMYLRYAETHGYKAAIANLQEGDEAGIKTCTIEISGDYAYGYLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVR+SPY++ +R TSF+S++V P+VDD+IE++I ++ DT+R+SGAGGQ+ Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVDIKVANISWDTFRSSGAGGQN 247 Query: 243 VNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 VN +S VR+ + ++++ + R Q KN+ A LR+ LY+ ELQ R Sbjct: 248 VNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMA 307 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ K +I WG QIRSYV + VKD RTN + + + V+DG +D F+KA L Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYLM 364 >gi|269123112|ref|YP_003305689.1| peptide chain release factor 2 [Streptobacillus moniliformis DSM 12112] gi|268314438|gb|ACZ00812.1| bacterial peptide chain release factor 2 (bRF- 2) [Streptobacillus moniliformis DSM 12112] Length = 362 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 162/321 (50%), Positives = 221/321 (68%), Gaps = 2/321 (0%) Query: 34 HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93 +++ +++ +++E L I I ++ + ILLE +E+ L+E Sbjct: 44 GFYKDQNKSQNVLKEISLLKERIKDISKLLTLNENIQILLEFYKQEEI--SLEELETETL 101 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 E++ + + LL+G+ D N A L ++AGAGGTES DW +ML RMY RWA + KFK E Sbjct: 102 EFIKELDKFKIKLLLNGKYDKNSAILTINAGAGGTESCDWVSMLYRMYDRWAMQNKFKVE 161 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 L+I G+EAGIKS TL IKG AYG+L E+GVHRLVRISP+DSN+RRHTSF+++ V P Sbjct: 162 VLDILAGDEAGIKSITLSIKGDYAYGYLDCEKGVHRLVRISPFDSNARRHTSFAAVNVIP 221 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 ++D +E+ + + D +IDTYRASGAGGQHVNTTDSAVRITHIPTG+VV CQ ERSQ+KN Sbjct: 222 EIEDDVEVNLKKEDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGIVVICQNERSQNKNL 281 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A +LRAKL+E+EL+ RE N + +++I WG QIRSYV QPY+MVKD RTN E+ Sbjct: 282 NSAMKVLRAKLFEIELKNRENEINDLKGVQSKIEWGSQIRSYVFQPYKMVKDHRTNHEEN 341 Query: 334 SPSDVLDGDLDDFMKATLAIK 354 + V+DGD++ F+ L I+ Sbjct: 342 NVDKVMDGDINIFIDEYLKIR 362 >gi|256846801|ref|ZP_05552256.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_36A2] gi|256717767|gb|EEU31325.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_36A2] Length = 331 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 148/329 (44%), Positives = 217/329 (65%), Gaps = 1/329 (0%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 T + + W + ++ +++ N +S +++ + D +L++ + + Sbjct: 2 EKLTFEENFWSDKRKSSEIIKNMNFEKNIVSRYEKLATEIDDEEVLIDFVESGEASFENE 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 + +K ++E + LL E D N+A + +H+GAGGTE+ DWA+ML RMY RW Sbjct: 62 -LQTKHKILKSDIEEFEINLLLDREYDMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCN 120 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 + +K L+ +G+ G+KS T L++G NAYG+LK E+GVHRLVRISP+D+N +RHTSF Sbjct: 121 LKGYKVSELDFMEGDSVGVKSVTFLVEGINAYGYLKSEKGVHRLVRISPFDANKKRHTSF 180 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S+ V P VD+++E+EI+ +D RIDTYRASGAGGQHVN TDSAVRITH P+G+VV CQ+E Sbjct: 181 ASVEVVPEVDENVEVEINPTDIRIDTYRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKE 240 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQ N+ A ML++KL ELE++K+EE + +++IGWG QIRSYV QPY +VKD Sbjct: 241 RSQLSNRETAMKMLKSKLLELEIKKKEEEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDH 300 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 RTN E + V+DG +DDF+ + L K Sbjct: 301 RTNTEIGNVKAVMDGSIDDFINSYLRWIK 329 >gi|294675125|ref|YP_003575741.1| peptide chain release factor 2 [Prevotella ruminicola 23] gi|294472270|gb|ADE81659.1| peptide chain release factor 2 [Prevotella ruminicola 23] Length = 374 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 128/357 (35%), Positives = 210/357 (58%), Gaps = 12/357 (3%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 + + L + D + +T+ P W++ A+ M++ + + + KE++ Sbjct: 12 ERADALHRYLEIDKKKIEYEEEDLRTQAPDFWEDRKRAEEQMKKVKGIKKWLDGYKEVRT 71 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 + + + D+ +E D + +E + +++L + D +A L++++G Sbjct: 72 LADELQLAFDFFK--DEMVTEEEVEDTYAKAIKAIEDLELKNMLRQKEDPMEAVLKINSG 129 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWLKG 183 AGGTE+QDWA+ML+RMY RWAE +K + DG+EAGIKS T+ ++ G AYG+LK Sbjct: 130 AGGTEAQDWASMLMRMYMRWAEAHGYKVTISNLLDGDEAGIKSVTMQLEGGDYAYGYLKS 189 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR+SP+++ +R TSF+S++V P+VDD+IE+ + + DT+R+SGAGGQ+V Sbjct: 190 ENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDTIEVYVDPAKLSWDTFRSSGAGGQNV 249 Query: 244 NTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 N +S VR+ + T ++++ + R Q KNK +A +L+++LY+ ++KR E Sbjct: 250 NKVESGVRLRYWYTDPDTGEEEEILIENTETRDQPKNKERAMTLLKSQLYDRAMKKRLEA 309 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ K +I WG QIRSYV + VKD RTN + T V+DG +DDF+KA L Sbjct: 310 QAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTTDVDGVMDGKIDDFIKAYLM 365 >gi|261881148|ref|ZP_06007575.1| peptide chain release factor RF2 [Prevotella bergensis DSM 17361] gi|270332153|gb|EFA42939.1| peptide chain release factor RF2 [Prevotella bergensis DSM 17361] Length = 374 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 132/357 (36%), Positives = 209/357 (58%), Gaps = 12/357 (3%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 + L + D +T+ P W + A+ M++ + L N + +++ Sbjct: 12 ERTTKLHHYLNIDKKQIEFEEEQLRTQAPDFWDDPKRAEAQMKKVKGLQNWLKDYSDVEL 71 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 + L +++ +E + ++ +E +F+++L E DS DA L++++G Sbjct: 72 LANELE--LAFDYYKEELVTEEEVDADYAKVIKAIEDLEFKNMLRSEEDSMDAVLKINSG 129 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PNAYGWLKG 183 AGGTESQDWA ML+RMY RW E +K + DG+EAGIKS T+ ++G AYG+LK Sbjct: 130 AGGTESQDWAQMLMRMYMRWCESHGYKVTITNLQDGDEAGIKSVTMTVEGGEFAYGYLKS 189 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR+SPY++ +R TSF+S+++ P+VDD+IE+ + + DT+R+SGAGGQ+V Sbjct: 190 ENGVHRLVRVSPYNAQGKRMTSFASVFISPLVDDTIEVYVDPARLSWDTFRSSGAGGQNV 249 Query: 244 NTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 N +S VR+ + ++++ + R Q KNKA+A +L+++LY+ E++KR E Sbjct: 250 NKVESGVRLRYQYEDPDTGEKEEILIENTETRDQPKNKAKAMLLLKSQLYDREMKKRLEA 309 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ K +I WG QIRSYV + VKD RTN + + V+DGDLD F+KA L Sbjct: 310 QAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGDLDGFIKAYLM 365 >gi|294635783|ref|ZP_06714243.1| peptide chain release factor 1 [Edwardsiella tarda ATCC 23685] gi|291090883|gb|EFE23444.1| peptide chain release factor 1 [Edwardsiella tarda ATCC 23685] Length = 360 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 116/337 (34%), Positives = 177/337 (52%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + + + D + Sbjct: 9 LEALQERHEEVQALLGDAGVIADQDRFRALSREYVQLTDVSRCFLDWRQAQDDLETAEMM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE + E+E + L D + +LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQEEIKETRERLNELEQQLQILLLPKDPDDERNCFLEVRAGTGGDEAGLFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +GE G K + G AYG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRIEVMSASEGEHGGYKEVIAKVSGEGAYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P V ++ +I+ +D RIDTYR+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPEVPEAELPQINPADLRIDTYRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR+ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEIAKRQ--REEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 IR+Y P V D R N+ +V++G LD ++ Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDSLIE 342 >gi|198274326|ref|ZP_03206858.1| hypothetical protein BACPLE_00470 [Bacteroides plebeius DSM 17135] gi|198272816|gb|EDY97085.1| hypothetical protein BACPLE_00470 [Bacteroides plebeius DSM 17135] Length = 371 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 134/358 (37%), Positives = 207/358 (57%), Gaps = 11/358 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L D + ++ +T+ P W + A+ M++ + L I+ +E+ Sbjct: 10 VKERTEALYRYLDIEGKKIQVEEEQLRTQAPGFWDDQKAAEAQMKKVKALQQWITGYQEV 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + L +D+ +E + + VE + +++L EAD D L+++ Sbjct: 70 KTLADELQ--LSFDFYKDELVTEEEVDEAYSKAISAVEELELKNMLRSEADQMDCVLKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDWA+ML+RMY RWAE +K + +G+EAGIK+ T+ I+G AYG+LK Sbjct: 128 SGAGGTESQDWASMLMRMYMRWAESNGYKLSVANLQEGDEAGIKTVTMNIEGSYAYGYLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVR+SPY++ +R TSF+S++V P+VDDSIE+ + + DT+R+ GAGGQ+ Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVTVEPARLSWDTFRSGGAGGQN 247 Query: 243 VNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 VN +S VR+ + ++++ + R Q KNK A LR+ LY+ ELQ R E Sbjct: 248 VNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNKENAMRQLRSILYDKELQHRME 307 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ K +I WG QIRSYV + VKD RTN + + + V+DG +D F+KA L Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGKIDGFIKAYLM 364 >gi|308186585|ref|YP_003930716.1| Peptide chain release factor 1 (RF-1) [Pantoea vagans C9-1] gi|308057095|gb|ADO09267.1| Peptide chain release factor 1 (RF-1) [Pantoea vagans C9-1] Length = 360 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 110/337 (32%), Positives = 176/337 (52%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + ++ Q D ++ Sbjct: 9 LEALQERHEEVEAMLGDAGVIADQERFRALSREYAQLTDVTRCFRDWQQVQEDIETAQQM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE + +E + L D ++EV AG GG E+ +A Sbjct: 69 LDDPEMRDMAQEELQEAREKSDVLEQQLQVLLLPKDPDDERACFIEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + ++GE G K + G AYG +K E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRVEIVSANEGEHGGYKEVIARVTGDGAYGRMKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ EI+ D +IDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVMPEIPEAELPEINAGDLKIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A +L ++++ E+ +R A + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALAVLGSRIHAAEMARR--HAAEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ +V++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTIYRLDEVMEGKLDSLIE 342 >gi|149377994|ref|ZP_01895719.1| peptide chain release factor 1 [Marinobacter algicola DG893] gi|149357703|gb|EDM46200.1| peptide chain release factor 1 [Marinobacter algicola DG893] Length = 361 Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats. Identities = 118/338 (34%), Positives = 181/338 (53%), Gaps = 9/338 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V R ++ D N + + L RE ++ + + Q D EL Sbjct: 9 LEQLVDRFEEVSALLSDQGTIANQDKFRDLSREFAEIEPIVHCFQAWQKSRDDVKEATEL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN---DAYLEVHAGAGGTESQD 132 A + D + + E + L D N + +LEV AG GG E+ Sbjct: 69 ARDGDADMRAMAEEELGLAEQKGEELDEELQRLMLPKDPNDGKNVFLEVRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L +MY R+AE+++++ E + +GE G K I G YG LK E G HR+ R Sbjct: 129 FAGDLFKMYMRYAERQRWQVEVISASEGEHGGYKEVIARIAGSAVYGALKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D++ +EI++SD R+DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRIHTSACTVAVMPEADETEAVEINKSDLRVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV+CQ+ERSQHKN+A+A + L ++L E++++++ + + K+ +G G Sbjct: 249 THIPTGIVVECQEERSQHKNRAKAMSFLASRLQNEEIERQQKT--MAATRKSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +IR+Y P V D R N+ +V+ GDLD + Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYKLDEVISGDLDAVI 343 >gi|260495130|ref|ZP_05815258.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_33] gi|260197187|gb|EEW94706.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_33] Length = 331 Score = 229 bits (583), Expect = 5e-58, Method: Composition-based stats. Identities = 151/329 (45%), Positives = 218/329 (66%), Gaps = 1/329 (0%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 T + + W + ++ +++ N +S +++ + D +L++ + + Sbjct: 2 EKLTFEENFWSDKRKSSEIIKNMNFEKNIVSRYEKLATEIEDEEVLIDFVESGETSFESE 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 + + +K +VE + LL GE D N+A + +H+GAGGTE+ DWA+ML RMY RW Sbjct: 62 LSE-KHKILKNDVEEFEINLLLDGEYDMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCN 120 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 R +K L+ +G+ G+KS T L++G NAYG+LK E+GVHRLVRISP+D+N +RHTSF Sbjct: 121 LRNYKVTELDFMEGDSVGVKSVTFLVEGINAYGYLKSEKGVHRLVRISPFDANKKRHTSF 180 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S+ V P VD+++E+EI +D RIDTYRASGAGGQHVN TDSAVRITH P+G+VV CQ+E Sbjct: 181 ASVEVVPEVDENVEVEIDPADIRIDTYRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKE 240 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQ N+ A ML++KL ELE++K+EE + +++IGWG QIRSYV QPY +VKD Sbjct: 241 RSQLSNRETAMKMLKSKLLELEIKKKEEEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDH 300 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 RTN E + V+DG +DDF+ + L K Sbjct: 301 RTNTEIGNVKAVMDGSIDDFINSYLRWIK 329 >gi|329956010|ref|ZP_08296781.1| putative peptide chain release factor 2 [Bacteroides clarus YIT 12056] gi|328524769|gb|EGF51823.1| putative peptide chain release factor 2 [Bacteroides clarus YIT 12056] Length = 372 Score = 229 bits (583), Expect = 5e-58, Method: Composition-based stats. Identities = 132/358 (36%), Positives = 206/358 (57%), Gaps = 11/358 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L D + ++ +T+ P W + A+ M++ + L IS E+ Sbjct: 10 IKERTEALNRYLDIEGKKIQVEEEQLRTQAPGFWDDQKAAEAQMKKVKGLQQWISGYNEV 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + + D+ +E + + VE + +++L EAD D L+++ Sbjct: 70 KVMADELQLAFDFYK--DELVTEEEVDEAYAKASAAVEALELKNMLREEADQMDCVLKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTESQDWA+ML+RMY R+AE +K + +G+EAGIK+ T+ I G AYG+LK Sbjct: 128 SGAGGTESQDWASMLMRMYLRYAETHGYKATIANLQEGDEAGIKACTIEIAGDYAYGYLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRLVR+SPY++ +R TSF+S++V P+VDD+IE+ I ++ DT+R+SGAGGQ+ Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVNIEQARISWDTFRSSGAGGQN 247 Query: 243 VNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 VN +S VR+ + ++++ + R Q KN+ A LR+ LY+ ELQ R Sbjct: 248 VNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMA 307 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ K +I WG QIRSYV + VKD RTN + + + V+DG +D F+KA L Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFVKAYLM 364 >gi|317063162|ref|ZP_07927647.1| peptide chain release factor 2 [Fusobacterium ulcerans ATCC 49185] gi|313688838|gb|EFS25673.1| peptide chain release factor 2 [Fusobacterium ulcerans ATCC 49185] Length = 328 Score = 229 bits (583), Expect = 5e-58, Method: Composition-based stats. Identities = 149/327 (45%), Positives = 214/327 (65%), Gaps = 1/327 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 T + + W + + +++E ++ K+++ + + +L++ + + Sbjct: 1 MTMEENFWNDKRSSSAIIKEMNDEKEIVAEFKKLESEMGEEEVLIDFVEMGEADFQTELE 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++ K LL GE DSN+A + +H+GAGGTE+ DWA+ML RMY+RW ++ Sbjct: 61 EKHMILGKDIDH-FDTRLLLDGEFDSNNAIVTIHSGAGGTEACDWADMLYRMYSRWCNEK 119 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 K+K ++ G+ GIKS T L++G NAYG++K E+G+HRLVRISP+D+N +RHTSF+S Sbjct: 120 KYKISEMDFMPGDSVGIKSITFLVEGRNAYGYMKSEKGIHRLVRISPFDANKKRHTSFAS 179 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P VD+S+E+ I D RIDTYRASGAGGQHVN TDSAVRITHIPTG+VV CQ+ERS Sbjct: 180 VEVMPEVDESVEVNIDAGDLRIDTYRASGAGGQHVNMTDSAVRITHIPTGIVVTCQRERS 239 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q N+ A ML++KL ELE++K+EE + ++EIGWG QIRSYV QPY +VKD RT Sbjct: 240 QLNNRETAMKMLKSKLIELEMKKKEEEMKRIQGEQSEIGWGNQIRSYVFQPYTLVKDHRT 299 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIKK 355 + E + V+DGD+D F+ L K Sbjct: 300 SAESGNIKAVMDGDIDIFINTYLRWNK 326 >gi|13959455|sp|P57511|RF2_BUCAI RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 365 Score = 229 bits (583), Expect = 5e-58, Method: Composition-based stats. Identities = 161/351 (45%), Positives = 240/351 (68%), Gaps = 1/351 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+R++ L D++ R+ ++ + P W I K L +E+ L++ I I EI Sbjct: 14 LNRRVQDLKRYLDYNKKKSRVLEIDLELSSPKTWTEQISIKKLNKEKYLLNSIIQNINEI 73 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ + + +I LELA+E D + +E+ +Q+I+ E++ +F + S + D D Y+++ Sbjct: 74 EENIKEVVIFLELAIETQDNLVFKESLLEIQKIEQEIKKLEFYRMFSKKNDHYDCYIDIQ 133 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +G+GGT++QDW+ MLLRMY RWA+K+ F TE ++ GE GIKS+T+ + G A+GW + Sbjct: 134 SGSGGTDAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIKSSTIKVSGEYAFGWFR 193 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRL+R SP+DS RRHTSFSSI++YP +++ I+I I+ SD RID YRASGAGGQH Sbjct: 194 TETGIHRLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYSDLRIDVYRASGAGGQH 253 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SAVRITH+PT +V QCQ RSQHKNK QA +++KLYE++++K++E E + Sbjct: 254 VNRTESAVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYEIQMRKKQEEKQKIEQN 313 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K++I WG QIRSY+L +KDLRT +EK VLDGDLDDF++ +L + Sbjct: 314 KSDITWGNQIRSYILD-NSKIKDLRTGVEKNHVQSVLDGDLDDFIEQSLIM 363 >gi|157273346|gb|ABV27245.1| peptide chain release factor 1 [Candidatus Chloracidobacterium thermophilum] Length = 357 Score = 229 bits (583), Expect = 5e-58, Method: Composition-based stats. Identities = 114/347 (32%), Positives = 178/347 (51%), Gaps = 12/347 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ L + DP + + L ++ L + +E Q + Sbjct: 1 MFDKLKALEEKYEALTAQLSDPEVVADAARYAKLAKQHSELTEVVEKFREYQTIEANLAS 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127 EL E +D ++ + + ++ + Q E D + LE+ AG GG Sbjct: 61 ARELLNEAEDAEMVALAREEIALLEKQRAQCQLELEQLLTPKDPNDRKNVLLEIRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A LLRMY R+AE+R ++ + L+ E G+K +LI+G Y LK E GV Sbjct: 121 NEASLFAGELLRMYLRYAERRGWRVQILDESLSEVGGLKEGIVLIEGTGVYSRLKHESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P + ++IEI D RIDT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPVTESAGRIHTSTVTVAVLP-EAEEVDIEIDPKDVRIDTFCSSGPGGQSVNTTY 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+VV Q E+SQ KN+ +A+ +LRA+L ELE QK+ E I + ++G Sbjct: 240 SAVRLTHLPTGLVVSIQDEKSQIKNREKAFRILRARLLELERQKQHE--AIAGERRAQVG 297 Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G + IR+Y + V D R + ++DG+LD + + Sbjct: 298 TGERSEKIRTYNFK-ENRVTDHRIGLTLHQLDTIMDGELDGLIDPLI 343 >gi|296101959|ref|YP_003612105.1| peptide chain release factor 1 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056418|gb|ADF61156.1| peptide chain release factor 1 [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 360 Score = 229 bits (583), Expect = 5e-58, Method: Composition-based stats. Identities = 114/337 (33%), Positives = 178/337 (52%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSKCFTDWQQVQEDIETAQMM 68 Query: 76 ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E D R + + Q L D +A++EV AG GG E+ +A Sbjct: 69 LDDPEMREMAQEELQDAKARSEEMEQQLQVLLLPKDPDDERNAFVEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + ++GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESRRWRVEIMSANEGEHGGFKEVIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ +V++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIE 342 >gi|323704815|ref|ZP_08116392.1| peptide chain release factor 1 [Thermoanaerobacterium xylanolyticum LX-11] gi|323535741|gb|EGB25515.1| peptide chain release factor 1 [Thermoanaerobacterium xylanolyticum LX-11] Length = 353 Score = 229 bits (583), Expect = 6e-58, Method: Composition-based stats. Identities = 122/345 (35%), Positives = 185/345 (53%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L+ K DP +++ E K + +E+ L+ + +E + D EL Sbjct: 5 LKAIEDRYVELSQKLSDPESMKDMDEWKKMAKEQAGLEEIVQKYREYKKVKDDIESTKEL 64 Query: 76 ALEEDDCSIL--QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 +D+ + E ++ + + + L D D +E+ AGAGG E+ + Sbjct: 65 IEMDDELKDMAEDELKSLEEKEESLLNEIKLLLLPKDPNDEKDVIMEIRAGAGGEEAALF 124 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A L RMYT +AEK+++K E + + E G K I G AY LK E GVHR+ RI Sbjct: 125 AYDLFRMYTMYAEKKRWKYEIMSSNATELGGFKEVIFSIAGKGAYSRLKFESGVHRVQRI 184 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 ++ R HTS +++ V P + ++IEI+ +D +ID +R+ G GGQ VNTTDSAVR+T Sbjct: 185 PTTEAGGRIHTSTATVAVLP-EVEDVDIEINPNDIKIDVFRSGGHGGQSVNTTDSAVRLT 243 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 HIPTG+V+ CQ ERSQ +N+ +A +LRAKLYE+ +++E I + K ++G G Sbjct: 244 HIPTGIVISCQDERSQLQNRERAMKILRAKLYEMAREEKE--REISMTRKLQVGTGDRSE 301 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + VLDGDLD+ + A LA + Sbjct: 302 RIRTYNF-PQGRVTDHRIGLTLYKLQMVLDGDLDEIIDALLAEDQ 345 >gi|220915515|ref|YP_002490819.1| peptide chain release factor 1 [Anaeromyxobacter dehalogenans 2CP-1] gi|254790857|sp|B8JAU2|RF1_ANAD2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|219953369|gb|ACL63753.1| peptide chain release factor 1 [Anaeromyxobacter dehalogenans 2CP-1] Length = 370 Score = 229 bits (583), Expect = 6e-58, Method: Composition-based stats. Identities = 110/341 (32%), Positives = 183/341 (53%), Gaps = 10/341 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + QR L DP + N + + +ER ++ ++ ++ + L D L Sbjct: 10 LEAIEQRFEELTQLLSDPAVAGNGDRFRKVAKERASIEQTVTALRAYRKLLEDVEGNEAL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYLEVHAGAGGTESQD 132 ++D + Q ++ + D D +E+ AGAGG E+ Sbjct: 70 LADKDPELRELAKEELAQLRPQVDPAEEQLKLYLVPKDPNDEKDVIVEIRAGAGGDEAGL 129 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A ++RMY R+AE+R ++ E ++ G G+K ATL + G Y LK E GVHR+ R Sbjct: 130 FAAEVMRMYVRYAERRGWRVELMDTSGGALGGVKEATLTVSGDAVYSSLKYESGVHRVQR 189 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P + I+++++ +D +D +R++G+GGQ VNTTDSAVR+ Sbjct: 190 VPATEAQGRIHTSTVTVAVMP-EAEEIDVQVNPADVEMDVFRSTGSGGQSVNTTDSAVRL 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH PTG+VV+CQQE+SQ KN+ A MLRAKL+E+E +++ + + K+++G G Sbjct: 249 THKPTGIVVKCQQEKSQLKNRTMAMKMLRAKLFEIEQERQRSARD--ATRKSQVGTGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P + D R N + + V+DGD+ D + A Sbjct: 307 EKIRTYNF-PQDRLTDHRVNYTRHNLPAVMDGDVQDVIDAC 346 >gi|170728014|ref|YP_001762040.1| peptide chain release factor 1 [Shewanella woodyi ATCC 51908] gi|238688639|sp|B1KDU3|RF1_SHEWM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|169813361|gb|ACA87945.1| peptide chain release factor 1 [Shewanella woodyi ATCC 51908] Length = 361 Score = 229 bits (583), Expect = 6e-58, Method: Composition-based stats. Identities = 111/342 (32%), Positives = 183/342 (53%), Gaps = 9/342 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R + DP + + + L +E L++ + Q D E+ Sbjct: 9 LEGLLERNEEVLALLSDPSVIADQERFRALSKEYSQLEDVVKSFTAFQQATEDLEAAKEM 68 Query: 76 ALEEDDCSILQETSDNLQRI---KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + + + + Q L D N+A++E+ AGAGG E+ Sbjct: 69 LNEDDPELKEMAQEEMKEAKSVLETLEDELQILLLPKDPNDDNNAFIEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY++++E +++ E + ++GE G K I G YG LK E G HR+ R Sbjct: 129 FAGDLFRMYSKYSESNRWQIEVMNTNEGEHGGFKEVIAKISGEGVYGKLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P + ++ IEI+++D ++DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRVHTSACTVIVLPEIPEAEAIEINKADLKVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV+CQ +RSQHKN+AQA ++L A++ +E +KR + + + G Sbjct: 249 THIPTGIVVECQDQRSQHKNRAQAMSVLSARIQAVEDEKRRSEEE--STRRNLVSSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P + D R N+ ++V++G LD ++ + Sbjct: 307 ERIRTYNF-PQGRMSDHRINLTLYRLNEVMEGVLDVIIEPLI 347 >gi|28493165|ref|NP_787326.1| peptide chain release factor 2 [Tropheryma whipplei str. Twist] gi|28572722|ref|NP_789502.1| peptide chain release factor 2 [Tropheryma whipplei TW08/27] gi|28410855|emb|CAD67240.1| peptide chain release factor 2 [Tropheryma whipplei TW08/27] gi|28476205|gb|AAO44295.1| peptide chain release factor RF-2 [Tropheryma whipplei str. Twist] Length = 376 Score = 229 bits (583), Expect = 6e-58, Method: Composition-based stats. Identities = 138/352 (39%), Positives = 209/352 (59%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ + + + + +R++ L + DP LW A+ + RE + + Sbjct: 12 EIEKTFSEITSVVSPVLLSKRIAELTARVSDPDLWTTPDRAQQIARELSITKAQLDRLTN 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ +L + +L+ L E D +L E S + + E + +++L+ E D A L + Sbjct: 72 LEAQLDEMRVLVTLLENEHDAGLLDEGSRKAKLLLEEANHLLIQNMLNNEYDCYPAVLTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG ++ D+A MLLRMY RWA+K + ++I EEAGI+SATL I P A+G L Sbjct: 132 RAGAGGIDAADFAQMLLRMYIRWAQKHSSEAIVMDISYAEEAGIRSATLRIDLPFAFGKL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G HRLVRISP+++ +RHTSF+++ V P++++ IEI+ + RID +R+SG GGQ Sbjct: 192 HQESGTHRLVRISPFNAAGKRHTSFAAVEVIPLLEEVSSIEITNDEIRIDVFRSSGPGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PTG+VV CQ E+SQ +N+ A +LRA+L + Q+ I Sbjct: 252 SVNTTDSAVRITHLPTGIVVSCQNEKSQIQNRESAMRILRARLLLNKRQEEAAIRKELAG 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + WG Q+R+YVL PYQ+VKDLR+ E + P V DGD+D F+ A + Sbjct: 312 NIV-ASWGEQVRNYVLAPYQLVKDLRSLHESSMPDKVFDGDIDGFIDAGIKW 362 >gi|304397559|ref|ZP_07379436.1| peptide chain release factor 1 [Pantoea sp. aB] gi|304354731|gb|EFM19101.1| peptide chain release factor 1 [Pantoea sp. aB] Length = 360 Score = 229 bits (583), Expect = 6e-58, Method: Composition-based stats. Identities = 111/337 (32%), Positives = 177/337 (52%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + ++ Q D ++ Sbjct: 9 LEALQERHEEVEAMLGDAGVIADQERFRALSREYAQLTDVTRCFRDWQQVQEDIETAQQM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE ++ + + Q L D ++EV AG GG E+ +A Sbjct: 69 LDDPEMRDMAQEELQEAREKNDVLEQQLQVLLLPKDPDDERACFIEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + ++GE G K + G AYG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRVEIISANEGEHGGYKEVIARVTGDGAYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ EI+ D +IDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVMPEIPEAELPEINAGDLKIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A +L ++++ E+ +R A + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALAVLGSRIHAAEMARR--HAAEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ +V++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTIYRLDEVMEGKLDSLIE 342 >gi|302384870|ref|YP_003820692.1| peptide chain release factor 1 [Clostridium saccharolyticum WM1] gi|302195498|gb|ADL03069.1| peptide chain release factor 1 [Clostridium saccharolyticum WM1] Length = 358 Score = 229 bits (583), Expect = 6e-58, Method: Composition-based stats. Identities = 113/351 (32%), Positives = 187/351 (53%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D+ + L + +P + ++ + LM+E+ L + + + + Sbjct: 1 MFDKLDDILIHYEELMQELNNPSVTEDQNRFRKLMKEQADLADLVETYTQYKKAKQTVED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 L L EE D + + + L K ++E + L D + LE+ AGAGG Sbjct: 61 SLALLEEESDEEMREMAKEELSEAKKQIEALEQELKILLLPKDPNDDKNIILEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A+ L RMY +AE +K E + +++ G K +I G AY +K E GV Sbjct: 121 DEAALFASELYRMYVNYAEGHHWKVELISVNENGIGGFKEVVAMITGKGAYSKMKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P ++ + I + D RID RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVMPEAEEFDVV-IEDKDVRIDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+V+ Q E+SQ +NK +A+ +LR+KLY++EL+KR+ + E +++IG Sbjct: 240 SAVRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDIELEKRQ--NSEAEERRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++GD+ + + + +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLYKIDSIMNGDIQELLDSLIAADQ 347 >gi|319650894|ref|ZP_08005031.1| peptide chain release factor 1 [Bacillus sp. 2_A_57_CT2] gi|317397492|gb|EFV78193.1| peptide chain release factor 1 [Bacillus sp. 2_A_57_CT2] Length = 357 Score = 229 bits (583), Expect = 6e-58, Method: Composition-based stats. Identities = 107/351 (30%), Positives = 175/351 (49%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + R LN DP + + + + +E+ + + +E ++ Sbjct: 1 MFDRLQSVEDRYERLNELLSDPEIVNDPKKLREYSKEQSGIQETVDTYREYKEVKEQYQD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 + E+ D + + + L ++ E + + D + +E+ AGG Sbjct: 61 ARAMLEEKLDAEMREMVKEELAELEERKEDLEARLKILLIPKDPNDDKNVIMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE + +K + +E G K +I G AY LK E G Sbjct: 121 DEAALFAGDLYRMYSRYAETQGWKIDVIEASSTGVGGYKEIIFMINGNGAYSKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +EI+I E D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EAEEVEIDIHEKDIRVDTFASSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG VV CQ E+SQ KNK +A +LRA++Y+ ++E A + K+ +G Sbjct: 240 SAVRLTHLPTGTVVSCQDEKSQIKNKEKAMKVLRARVYDKF--QQEAQAEYDQQRKSAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L G LD+ + A + ++ Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDEVIDALIVEEQ 347 >gi|292493886|ref|YP_003529325.1| peptide chain release factor 1 [Nitrosococcus halophilus Nc4] gi|291582481|gb|ADE16938.1| peptide chain release factor 1 [Nitrosococcus halophilus Nc4] Length = 363 Score = 229 bits (583), Expect = 7e-58, Method: Composition-based stats. Identities = 118/346 (34%), Positives = 187/346 (54%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72 +N +R L +P + + + + +E L+ I ++ + + L + L Sbjct: 9 LENLAERQQELAALLAEPEIANDQKQFREFSQEYAQLEPVIGCFRDFEETQNALNEAKAL 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L+ E +E ++ ++++ + Q L S D + +LE+ AG GG E+ Sbjct: 69 LKDQDPELRTLAQEEVAEAERKLEQLDQELQTLLLPSDPNDKRNIFLEIRAGIGGDEAAL 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A+ LLRMY R+AE+R ++ E + GE G K + I G AY LK E G HR+ R Sbjct: 129 FASDLLRMYLRYAEQRGWRKEIISDSPGEYGGHKEVIIRIVGEGAYSRLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ + P ++ +I+I+ SD RIDT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPQTESQGRIHTSACTVAIMPEAEEIDDIDINLSDLRIDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ ERSQHKN+ +A ++LRAKL E K + ++ +G G Sbjct: 249 THLPTGIVVECQDERSQHKNRVRAMSLLRAKLKSKEETKLAAE--EAATRRSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ ++L+G L+ + +A + Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYKLDEILEGHLNAVIDPLIAEYQ 351 >gi|258616656|ref|ZP_05714426.1| peptide chain release factor 2 in translation [Enterococcus faecium DO] Length = 246 Score = 229 bits (583), Expect = 7e-58, Method: Composition-based stats. Identities = 149/243 (61%), Positives = 186/243 (76%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 D N+A +E+H GAGGTESQDW +MLLRMYTRWAE+ ++ E L+ G+EAGIKS TL Sbjct: 1 PYDRNNAIVELHPGAGGTESQDWGSMLLRMYTRWAEQHGYQVETLDYQAGDEAGIKSVTL 60 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 LIKG NA+G+LK E+GVHRLVRISP+DS RRHTSF S+ V P +D++I+IEI+ D +I Sbjct: 61 LIKGHNAFGYLKSEKGVHRLVRISPFDSAKRRHTSFCSVDVMPELDETIDIEINPDDLKI 120 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DTYRASGAGGQH+N T+SAVRITH+PTG VV Q +RSQ KN+ QA ML+AKLY+LE++ Sbjct: 121 DTYRASGAGGQHINKTESAVRITHLPTGTVVASQAQRSQLKNREQAMGMLKAKLYQLEVE 180 Query: 291 KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 K+E+ A + EIGWG QIRSYV PY MVKD RTN+E + V+DGDLD F+ Sbjct: 181 KKEQEAAALRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNVETGNVQAVMDGDLDLFIDGY 240 Query: 351 LAI 353 L + Sbjct: 241 LKM 243 >gi|33860740|ref|NP_892301.1| peptide chain release factor 2 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33633682|emb|CAE18639.1| peptide chain release factor RF-2 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 373 Score = 229 bits (583), Expect = 7e-58, Method: Composition-based stats. Identities = 138/352 (39%), Positives = 206/352 (58%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L+++L D N V + L P W N +AK M + + + + + Sbjct: 13 ELTKRLGNAQDCLDVPNLVAKKKELEQIAAQPEFWGNQADAKKHMLNLDDVRDQLQLLDK 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + D LEL E + ++ E+ L ++ ++ +F+ LL GE D A + + Sbjct: 73 WKMFISDAEASLELYSLEPEEEMIVESHQGLVTLRENLDKWEFQRLLCGEYDKEAAIVSI 132 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +AGAGGT++QDW +LLRMY+RW + E ++ DGEEAGIKS T + G AYG+L Sbjct: 133 NAGAGGTDAQDWVEILLRMYSRWVDNNGMSLEITDLSDGEEAGIKSVTFEVNGKYAYGYL 192 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E+G HRLVRISP+++N +R TSF+ + V P +D SI ++I + D I T R+ GAGGQ Sbjct: 193 QNEKGTHRLVRISPFNANGKRQTSFAGVEVMPKLDQSISLDIPDKDLEITTSRSGGAGGQ 252 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN ++AVRI H+P+G+ V+C QERSQ +NK +A +L+AKL + ++R + + Sbjct: 253 NVNKVETAVRIVHLPSGIAVRCTQERSQLQNKEKAMLLLKAKLLVIAKEQRASEISDIKG 312 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 E WG QIR+YV PYQMVKDLRT E VL+G LD F+ L + Sbjct: 313 DIVEAAWGNQIRNYVFHPYQMVKDLRTMKETNDLDAVLNGGLDQFIHELLRM 364 >gi|281421022|ref|ZP_06252021.1| peptide chain release factor 2 [Prevotella copri DSM 18205] gi|281404940|gb|EFB35620.1| peptide chain release factor 2 [Prevotella copri DSM 18205] Length = 375 Score = 228 bits (582), Expect = 7e-58, Method: Composition-based stats. Identities = 125/356 (35%), Positives = 208/356 (58%), Gaps = 12/356 (3%) Query: 6 QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 + + L + D +T+ P W++ A+ M++ + + + K ++ Sbjct: 13 RADALHHYLNIDQKKVEFEEEQLRTQAPDFWEDPKYAQEQMKKVKGIQKWLDGYKTVRLY 72 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 + + + D+ +E + + +E + +++L + D D L++++GA Sbjct: 73 ADELQLAFDFYK--DEMVTEEEVDADYAKAIKAIEDLELKNMLRQKEDPMDCVLKINSGA 130 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PNAYGWLKGE 184 GGTESQDWA ML+RMY RW+E +K ++ +G+EAGIKS T+ I+G AYG+LK E Sbjct: 131 GGTESQDWAQMLMRMYMRWSEAHGYKVTITDMQEGDEAGIKSVTMTIEGGEYAYGYLKSE 190 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHRLVR+SP+++ +R TSF+S++V P+VDD+IE+ + + DT+R+SGAGGQ+VN Sbjct: 191 NGVHRLVRVSPFNAQGKRMTSFASVFVTPLVDDTIEVYVDPAKLSWDTFRSSGAGGQNVN 250 Query: 245 TTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 +S VR+ + T ++++ + R Q KN+A+A +L+++LY+ ++KR E Sbjct: 251 KVESGVRLRYWYTDPDTGEEEEILIENTETRDQPKNRAKALLLLKSQLYDRAMKKRLEAK 310 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ K +I WG QIRSYV + VKD RTN + + V+DG +DDF+KA L Sbjct: 311 AKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKIDDFIKAYLM 365 >gi|134294603|ref|YP_001118338.1| peptide chain release factor 1 [Burkholderia vietnamiensis G4] gi|166223537|sp|A4JB50|RF1_BURVG RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|134137760|gb|ABO53503.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia vietnamiensis G4] Length = 360 Score = 228 bits (582), Expect = 7e-58, Method: Composition-based stats. Identities = 118/346 (34%), Positives = 177/346 (51%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72 D RL+ LN ++ ++ + + L RE L + + D L Sbjct: 9 LDQLSVRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRNDEAAAQEL 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L A D ++ K D + +LE+ AG GG ES Sbjct: 69 LADASMRDFAEEAIRSARERMTRLEGELQKMLL--PKDPNDDRNIFLEIRAGTGGDESAL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A LLRMY R+AE+++++ E + + G K + I G AY LK E G HR+ R Sbjct: 127 FAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+ Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ ++DGDLD+ + A ++ + Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYRLEALMDGDLDELIGALVSEHQ 349 >gi|257468914|ref|ZP_05633008.1| peptide chain release factor 2 [Fusobacterium ulcerans ATCC 49185] Length = 326 Score = 228 bits (582), Expect = 7e-58, Method: Composition-based stats. Identities = 148/324 (45%), Positives = 213/324 (65%), Gaps = 1/324 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 + + W + + +++E ++ K+++ + + +L++ + + + Sbjct: 2 EENFWNDKRSSSAIIKEMNDEKEIVAEFKKLESEMGEEEVLIDFVEMGEADFQTELEEKH 61 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + K LL GE DSN+A + +H+GAGGTE+ DWA+ML RMY+RW ++K+K Sbjct: 62 MILGKDIDH-FDTRLLLDGEFDSNNAIVTIHSGAGGTEACDWADMLYRMYSRWCNEKKYK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 ++ G+ GIKS T L++G NAYG++K E+G+HRLVRISP+D+N +RHTSF+S+ V Sbjct: 121 ISEMDFMPGDSVGIKSITFLVEGRNAYGYMKSEKGIHRLVRISPFDANKKRHTSFASVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P VD+S+E+ I D RIDTYRASGAGGQHVN TDSAVRITHIPTG+VV CQ+ERSQ Sbjct: 181 MPEVDESVEVNIDAGDLRIDTYRASGAGGQHVNMTDSAVRITHIPTGIVVTCQRERSQLN 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ A ML++KL ELE++K+EE + ++EIGWG QIRSYV QPY +VKD RT+ E Sbjct: 241 NRETAMKMLKSKLIELEMKKKEEEMKRIQGEQSEIGWGNQIRSYVFQPYTLVKDHRTSAE 300 Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355 + V+DGD+D F+ L K Sbjct: 301 SGNIKAVMDGDIDIFINTYLRWNK 324 >gi|317491752|ref|ZP_07950187.1| peptide chain release 1 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920186|gb|EFV41510.1| peptide chain release 1 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 360 Score = 228 bits (582), Expect = 7e-58, Method: Composition-based stats. Identities = 113/337 (33%), Positives = 174/337 (51%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + + Q D + Sbjct: 9 LEALQERHEEVQAHLGDAGVIADQDRFRALSREYAQLTDVTRCFQTWQQVQEDLSTAEMM 68 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE + + Q L D YLE+ AG GG E+ +A Sbjct: 69 LDDPEMREMAQEEIAEAKNQIADLEQQLQILLLPKDPDDERSCYLEIRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 + RMY+R+AE R++K E + ++GE G K + G AYG LK E G HR+ R+ Sbjct: 129 GDMFRMYSRYAESRRWKIEVMSANEGEHGGYKEIIAKVIGDGAYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ +I+ D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPEIPEAELPDINPGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIRAAEMAKRQQE--EASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ +V++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTIYRLDEVMEGKLDSLIE 342 >gi|118581059|ref|YP_902309.1| peptide chain release factor 1 [Pelobacter propionicus DSM 2379] gi|166223584|sp|A1ASD1|RF1_PELPD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|118503769|gb|ABL00252.1| bacterial peptide chain release factor 1 (bRF-1) [Pelobacter propionicus DSM 2379] Length = 354 Score = 228 bits (582), Expect = 7e-58, Method: Composition-based stats. Identities = 109/348 (31%), Positives = 175/348 (50%), Gaps = 9/348 (2%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + +R L DP + N E + L RE L ++ + + L + Sbjct: 1 MFDKIEELERRYQELEALLSDPAVISNQPEFRKLSREHADLTGLVAAYRRYRRVLEEMEG 60 Query: 72 LLELALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 EL + D + +E + + Q L D LE+ AG GG ES Sbjct: 61 NRELLADVDMKEMAEEELKVLEEEKERLEGEIQMLLLPRDPNDDKSVILEIRAGTGGDES 120 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY+R+A+ ++K E + + E G K ++G + LK E G HR+ Sbjct: 121 ALFAGDLFRMYSRFADVNRWKVETISASESERGGFKEIIASVEGEGVFAKLKYESGTHRV 180 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS ++ + + ++I+I+ +D +ID YR+SGAGGQHVNTTDSAV Sbjct: 181 QRVPETEAQGRIHTSACTVAIMA-EAEDVDIDINPTDLKIDVYRSSGAGGQHVNTTDSAV 239 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG VV CQ+ERSQ KN+A+A +L+ ++ + Q++ A + K ++G G Sbjct: 240 RITHLPTGTVVACQEERSQIKNRAKAMKVLKTRIMDSIQQEQN--ARMAADRKQQVGSGD 297 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + ++ GD+ + + A A + Sbjct: 298 RSERIRTYNF-PQGRMTDHRIGLTLYRLDAIMAGDIAEIVDALRAHYQ 344 >gi|94264473|ref|ZP_01288261.1| Peptide chain release factor 2 [delta proteobacterium MLMS-1] gi|93455104|gb|EAT05328.1| Peptide chain release factor 2 [delta proteobacterium MLMS-1] Length = 303 Score = 228 bits (582), Expect = 7e-58, Method: Composition-based stats. Identities = 153/302 (50%), Positives = 214/302 (70%) Query: 53 DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112 N + + ++ + ILLELA+ E+D QE + +L+ ++ + + E + SGE Sbjct: 2 QNLVDAFRAVEAAGEEAEILLELAIAEEDRETEQEVAGHLKNLESRLAELELECMFSGEH 61 Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+N+A L +HAGAGGTE+QDW +LLRMY RWAE + F T+ L++ G+EAGIK T+++ Sbjct: 62 DANNAILTIHAGAGGTEAQDWVEILLRMYLRWAENKGFTTDTLDLLPGDEAGIKGVTVMV 121 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG AYG+L+ E G+HRLVRISP+D+ RRHTSF+S++++P + D I +E+++ D RIDT Sbjct: 122 KGRWAYGYLRSEMGIHRLVRISPFDTGGRRHTSFASVFIFPELTDDIAVEVNDKDLRIDT 181 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +RASGAGGQHVN T SA+RITH+PTG+V QCQ ERSQH+NK A ML+A+LYE + +R Sbjct: 182 FRASGAGGQHVNKTSSAIRITHLPTGIVAQCQNERSQHRNKDTAMKMLKAQLYERQQAQR 241 Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E K EI WG QIRSYVLQPY++VKD RT+ E + VLDG++D F+K+ L Sbjct: 242 REDQEHLHGDKKEIAWGSQIRSYVLQPYRLVKDHRTDHETGNVDSVLDGNIDPFIKSYLL 301 Query: 353 IK 354 + Sbjct: 302 WR 303 >gi|289423330|ref|ZP_06425138.1| peptide chain release factor 1 [Peptostreptococcus anaerobius 653-L] gi|289156261|gb|EFD04918.1| peptide chain release factor 1 [Peptostreptococcus anaerobius 653-L] Length = 354 Score = 228 bits (582), Expect = 7e-58, Method: Composition-based stats. Identities = 115/351 (32%), Positives = 182/351 (51%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + L+ K DP + + + LM+E L+ + +E + Sbjct: 1 MLDKLMVLEDKYKELSEKVADPEIISDQPTWQKLMKENSELEPIVMKYREYRKVNETIAE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 ++ EE D + + L + ++ + + D + +E+ GAGG Sbjct: 61 SKQILEEESDEDLRELAKMELSEAESQIVDIEDELKLLLVPKDPNDEKNVIVEIRGGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE++ +KT + ++ G K + LIKG AY LK E GV Sbjct: 121 DEAALFAGDLFRMYSRYAERKGWKTSLMSSNETGVGGYKEVSFLIKGKGAYSRLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +S R HTS +++ V P D +E++I+ D R D +RASG GGQ VNTTD Sbjct: 181 HRVQRIPTTESGGRIHTSTATVAVLP-EVDDVEVQINPEDLRFDVFRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG VV CQ E+SQ KNK +A +L+A+LY+ L +++ I K+++G Sbjct: 240 SAVRLTHIPTGEVVSCQDEKSQLKNKEKALKVLKARLYDRALADQQKE--ISAERKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R N+ +DGD+D+ + + + + Sbjct: 298 TGDRSERIRTYNF-PQGRVSDHRINLTLYKLDSFIDGDIDEMIDGLITVDQ 347 >gi|90417703|ref|ZP_01225615.1| peptide chain release factor 2 [Aurantimonas manganoxydans SI85-9A1] gi|90337375|gb|EAS51026.1| peptide chain release factor 2 [Aurantimonas manganoxydans SI85-9A1] Length = 321 Score = 228 bits (582), Expect = 7e-58, Method: Composition-based stats. Identities = 218/309 (70%), Positives = 251/309 (81%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD AI + + L DN+ L+ + EE D I++E ++ IK E + +Q E Sbjct: 1 MRERQFLDTAIGAVNRLNQSLQDNIELIAMGEEEKDAEIVKEAEAAIREIKSEADKRQIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEADSND Y+EVH+GAGGTESQDWA ML RMY RWAE+ KFK E LE H GEEAGI Sbjct: 61 TLLSGEADSNDTYVEVHSGAGGTESQDWAAMLQRMYMRWAERAKFKVEVLEEHSGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLLIKG NAYGW+K E GVHRLVRISPYDS +RRHTSF+S+WVYPVVDDSI+I+++E Sbjct: 121 KSATLLIKGHNAYGWMKTESGVHRLVRISPYDSQARRHTSFASVWVYPVVDDSIDIDVNE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD RIDTYRASGAGGQHVNTTDSAVRITH+ TG+VVQCQ ERSQHKN+A AWNMLRA+LY Sbjct: 181 SDVRIDTYRASGAGGQHVNTTDSAVRITHLETGIVVQCQAERSQHKNRATAWNMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL++RE AN +SKT+IGWG QIRSYVLQPYQMVKDLRT IE TSP DVLDG LD Sbjct: 241 EAELERRENAANAEAASKTDIGWGHQIRSYVLQPYQMVKDLRTGIESTSPQDVLDGGLDP 300 Query: 346 FMKATLAIK 354 FM+ LA + Sbjct: 301 FMEGALAHR 309 >gi|217967194|ref|YP_002352700.1| peptide chain release factor 1 [Dictyoglomus turgidum DSM 6724] gi|226739103|sp|B8E003|RF1_DICTD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|217336293|gb|ACK42086.1| peptide chain release factor 1 [Dictyoglomus turgidum DSM 6724] Length = 367 Score = 228 bits (582), Expect = 8e-58, Method: Composition-based stats. Identities = 117/347 (33%), Positives = 187/347 (53%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + + + + + L++ER ++ + +E + L + L E+ Sbjct: 10 LEEIEKRFEEIEGLLAKEDVISDFNKYQSLLKERAKIEEIVDKFREYKRLLKEKEDLEEM 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 EE D + L+ I+ ++E +FE D + +E+ AG GG E+ Sbjct: 70 VKEEQDEDLRSLAETELEDIQEKLEKVEFELKALLLPKDPNDEKNIIMEIRAGTGGEEAA 129 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY +A+K+ +K E + + G K +++G AY LK E GVHR+ Sbjct: 130 LFAADLFRMYLGYAQKKGWKVEIVSSNPTGLGGFKEIIFIVEGKGAYSRLKFESGVHRVQ 189 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S+ R HTS +++ V P + IE+EI D RI+T+R+ GAGGQHVN T+S VR Sbjct: 190 RVPITESSGRIHTSTATVAVLP-EMEEIEVEIDPKDLRIETFRSGGAGGQHVNKTESGVR 248 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIP+G+VVQCQ ERSQH+N+ +A +LRA+LYE +RE+ I + ++G G + Sbjct: 249 ITHIPSGIVVQCQDERSQHQNREKAMKVLRARLYEYY--QREKENEIASQRRQQVGTGER 306 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + V D R N +VL G+LD+F+ + +K Sbjct: 307 SEKIRTYNF-PQRRVTDHRINYSSFQLEEVLSGELDEFIDRLILAEK 352 >gi|333029894|ref|ZP_08457955.1| Peptide chain release factor 1 [Bacteroides coprosuis DSM 18011] gi|332740491|gb|EGJ70973.1| Peptide chain release factor 1 [Bacteroides coprosuis DSM 18011] Length = 361 Score = 228 bits (582), Expect = 8e-58, Method: Composition-based stats. Identities = 102/346 (29%), Positives = 172/346 (49%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ V R ++T DP + + L +E + L + ++ KE L E+ Sbjct: 10 LEDLVARFDEVSTLITDPAVIADQTRFVKLTKEYKELSDLMNARKEYIAALQGVTEAKEI 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + L+ + + + + D +A +E+ AG GG E+ Sbjct: 70 IAHESDPEMKEMAREELEDCETRIPELEETIKLLLIPKDPQDERNAIMEIRAGTGGDEAA 129 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+++ E + + E ++G G K + G N YG LK E GVHR+ Sbjct: 130 LFAGDLFRMYSKYCENKGWTVEINNFNEGTAGGFKEIVFSVSGDNVYGILKYESGVHRVQ 189 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS ++ V P + +++E++ +D + T R+ GAGGQHVN ++ V Sbjct: 190 RVPETESQGRVHTSAITVAVLP-EAEEVDVELNPADIELQTARSGGAGGQHVNKVETKVM 248 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +TH PTG+VV CQ+ RSQH N+ +A +LR+KLYE+E +K + E K+ + G + Sbjct: 249 LTHKPTGLVVICQEGRSQHSNREKAMQILRSKLYEIEYEKANKER--SEQRKSLVSTGDR 306 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P + D R N + +DGD+ D + + + Sbjct: 307 SAKIRTYNY-PQGRITDHRINYTIYNLQAFMDGDIQDCIDHLIVAE 351 >gi|282880596|ref|ZP_06289302.1| putative peptide chain release factor 2 [Prevotella timonensis CRIS 5C-B1] gi|281305491|gb|EFA97545.1| putative peptide chain release factor 2 [Prevotella timonensis CRIS 5C-B1] Length = 374 Score = 228 bits (582), Expect = 8e-58, Method: Composition-based stats. Identities = 128/357 (35%), Positives = 206/357 (57%), Gaps = 12/357 (3%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 + L + D +T+ P W++ A+ M + + ++ + ++++ Sbjct: 12 ERTQALHHYLNIDQKKIEFEEEQLRTQAPDFWEDPQRAQEQMIKVKGIEKWLKGYEQVRQ 71 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 + + E DD +E + + +E + +++L + D D +++++G Sbjct: 72 MADELQLAYEFY--RDDMVTEEELDHDYAKAIAAIEDLELKNMLRQKEDPMDCVMKINSG 129 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWLKG 183 AGGTESQDWA ML+RMY RWAE +K +I DGEEAGIKS T+ I+ AYG+LK Sbjct: 130 AGGTESQDWAQMLMRMYMRWAEAHDYKCTVSDIQDGEEAGIKSVTMKIEGNEYAYGFLKS 189 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR+SP+++ +R TSF+S++V P+VDD+IE+ + + DT+R+SGAGGQ+V Sbjct: 190 ENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDTIEVFVDPACVSWDTFRSSGAGGQNV 249 Query: 244 NTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 N +S VR+ + ++++ + R Q KN+A+A +L+++LY+ ++KR E Sbjct: 250 NKVESGVRLRYQYHDPDTGEEEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRLEA 309 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ K +I WG QIRSYV + VKD RTN + T V+DG +DDF+KA L Sbjct: 310 QAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTTDVDGVMDGKIDDFIKAYLM 365 >gi|299144121|ref|ZP_07037201.1| peptide chain release factor 1 [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518606|gb|EFI42345.1| peptide chain release factor 1 [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 356 Score = 228 bits (582), Expect = 8e-58, Method: Composition-based stats. Identities = 109/342 (31%), Positives = 185/342 (54%), Gaps = 11/342 (3%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 ++ L K D ++ + + + E ++ + +E + + + E+ E Sbjct: 10 EKYIELEQKLMDINVINDSKLYQKIAIEHAEIEPVVLKYREYKTLISNLEDNKEMLNENL 69 Query: 81 DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 D + ++++ + ++ + + DS + +E+ AGAGG E+ +A + Sbjct: 70 DDDMRDLIKEDIKDSEEKISVLEDEIKILLIPKDPNDSKNVIVEIRAGAGGDEAALFAGV 129 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L R Y R+AE+ +K E + ++ G K +I G AY LK E GVHR+ R+ Sbjct: 130 LFRQYVRFAERMGWKVEIMSTNEIGIGGYKEVIFMILGRGAYSRLKYESGVHRVQRVPET 189 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S+ R HTS +++ V P + +EI+I SD + D +RASG GGQ VNTTDSAVR+THIP Sbjct: 190 ESSGRIHTSTATVAVLP-EAEDVEIDIEPSDIKFDVFRASGNGGQCVNTTDSAVRLTHIP 248 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG+V+ CQ E+SQ +NK +A +L+ KLY+L+LQ++ ++ + K++IG G +IR Sbjct: 249 TGIVISCQDEKSQLRNKEKAMKILKTKLYDLKLQEQNAELSMQK--KSQIGTGDRSERIR 306 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +Y P V D R + ++DGDLD+ + A +A + Sbjct: 307 TYNY-PQGRVTDHRIGLTLHKIDSIVDGDLDEIIDALIASDQ 347 >gi|239628684|ref|ZP_04671715.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239518830|gb|EEQ58696.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 357 Score = 228 bits (582), Expect = 8e-58, Method: Composition-based stats. Identities = 116/351 (33%), Positives = 189/351 (53%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D+ + L DP + Q+ LM+E+ L + K+ + D Sbjct: 1 MFDRLDDMLIHYEELMLMLGDPAVTQDTKRFTRLMKEQADLAPIVEAYKQYKQAKQDVED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127 L L EE+D + + + L K +E + E D + LE+ AGAGG Sbjct: 61 SLALLEEENDEEMREMAKEELSDAKKRIEELEHELKILLLPKDPNDDKNIILEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+ +A+ ++K E + +++ G K ++ G AY LK E GV Sbjct: 121 DEAALFAAELYRMYSNYADSHRWKVEIISLNENGIGGFKEVVAMVTGKGAYSKLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + ++++I +D RID RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVMP-EAEEVDVQIDMNDIRIDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+V+ Q E+SQ +NK +A+ +LR+KLY++EL+KR+ ++ E +++IG Sbjct: 240 SAVRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDIELEKRQ--SSEAEERRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++GD+ + + +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLYKIDSIMNGDIQELLDNLIAADQ 347 >gi|307823419|ref|ZP_07653648.1| peptide chain release factor 1 [Methylobacter tundripaludum SV96] gi|307735404|gb|EFO06252.1| peptide chain release factor 1 [Methylobacter tundripaludum SV96] Length = 361 Score = 228 bits (582), Expect = 8e-58, Method: Composition-based stats. Identities = 108/346 (31%), Positives = 181/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +N +R + +P + N + + L +E ++ + K Q L E+ Sbjct: 9 LENLCERYDEIAALLSEPEVQGNQNKFRSLSQEYAQINPLVDCYKRYQQTLESLASAKEM 68 Query: 76 ALEEDDCSILQETS---DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 A + D D +++ Q L D+ + ++E+ AG GG E+ Sbjct: 69 ANDSDPELREMAKEEVNDAENQLEAIEHELQVLLLPKDPNDNRNIFIEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY R+AE++ ++TE + G+ G K L + G + Y LK E G HR+ R Sbjct: 129 FSGDLARMYQRYAERKGWQTEIINESHGDHGGYKEVILRVAGKDVYSQLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ + P VD+ I+I+ +D ++DT+RASGAGGQH+N T+SA+RI Sbjct: 189 VPETESQGRIHTSACTVAIMPEVDEVDAIDINPADLKVDTFRASGAGGQHINKTESAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTGVVV+CQ ERSQHKN+A+A ++L ++L E +K + K ++G G Sbjct: 249 THVPTGVVVECQDERSQHKNRARAMSLLASRLLSAEQEKHHAEQ--SATRKLQVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ D++ G L+ ++ ++ + Sbjct: 307 ERIRTYNY-PQGRLTDHRINLTLYKLDDIMQGGLEQVIQPLISEHQ 351 >gi|295677813|ref|YP_003606337.1| peptide chain release factor 1 [Burkholderia sp. CCGE1002] gi|295437656|gb|ADG16826.1| peptide chain release factor 1 [Burkholderia sp. CCGE1002] Length = 360 Score = 228 bits (582), Expect = 8e-58, Method: Composition-based stats. Identities = 115/344 (33%), Positives = 175/344 (50%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D RL+ LN + N+ + + L RE L + + D EL Sbjct: 9 LDQLTTRLAELNDLLSREDITANLDQYRKLTREHAELGPVVEHYGLWRQAQNDAATAQEL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + +E + Q L D + +LE+ AG GG ES +A Sbjct: 69 LADASMRDFAEEEIRAARDRMETLGVELQKMLLPKDPNDERNIFLEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE+ +++ E + + + G + + I G AY LK E G HR+ R+ Sbjct: 129 GDLLRMYLRYAERNRWQVEMMSASESDLGGYREVIVRIAGDAAYSKLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ + K IG G + Sbjct: 249 LPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QTHEQQTKEAATRKNLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++DGDL++ + A ++ + Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLEELIAALVSEHQ 349 >gi|296170240|ref|ZP_06851833.1| peptide chain release factor RF1 [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895116|gb|EFG74834.1| peptide chain release factor RF1 [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 357 Score = 228 bits (582), Expect = 8e-58, Method: Composition-based stats. Identities = 117/346 (33%), Positives = 169/346 (48%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + + L + DP L N EA+ R L ++ ++++ D EL Sbjct: 8 IDVLLAEHAELEQRLADPDLHSNPAEARKAGRRFARLAPIVATYRKLESARGDLETAREL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A +++ + D++D LEV +G GG ES +A Sbjct: 68 AADDESFADEVTELAARVAELDTQLTDML--APRDPHDADDIVLEVKSGEGGEESALFAA 125 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190 L RMY R+AE+ + L+ + G K ATL I + +K E GVHR+ Sbjct: 126 DLARMYIRYAERHGWNVTVLDETTSDLGGYKDATLSIASKGDSADGVWSRMKFEGGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS + + VYP ++ E+ I ESD RID YR+SG GGQ VNTTDSAV Sbjct: 186 QRVPVTESQGRVHTSAAGVLVYPEPEEVGEVHIDESDLRIDVYRSSGKGGQGVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG+VV CQ ERSQ +NKA+A +L A+L + ++ A+ +S+ + Sbjct: 246 RITHLPTGIVVTCQNERSQLQNKARALQVLAARLQAMAEEQALADASADRASQIRTVDRS 305 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + + VLDGDLD A A K Sbjct: 306 ERIRTYNF-PENRITDHRIGYKAHNLDQVLDGDLDAMFDALGAADK 350 >gi|73662075|ref|YP_300856.1| peptide chain release factor 1 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|119361617|sp|Q49Z65|RF1_STAS1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|72494590|dbj|BAE17911.1| peptide chain release factor 1 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 358 Score = 228 bits (582), Expect = 8e-58, Method: Composition-based stats. Identities = 112/351 (31%), Positives = 184/351 (52%), Gaps = 13/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D +R LN DP + N + +E+ L + ++ + D Sbjct: 1 MFDQLDIVEERYEQLNEMLSDPDVVNNPDNLRKYSKEQAELQKTVDVYRDYKQTKEDISE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 + E+ + D ++ + Q ++ +V + F + D D +E+ A AGG Sbjct: 61 VEEMLRDTKDNDEIEMLKEEHQTLQNKVPKLEEELKFLLIPKDPNDDKDVIVEIRAAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+++AE +KT+ +E+ + + G K + + G A+ LK E G Sbjct: 121 DEAAIFAGDLFRMYSKYAETLNYKTDIVEVTESDHGGYKEISFSVSGNGAFSKLKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +EIE+ D +IDTYR+SGAGGQHVNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEVRNEDLKIDTYRSSGAGGQHVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTGV+ E+SQ +N+ +A +L+A+L++++LQ EE K+ +G Sbjct: 240 SAVRITHIPTGVIATSS-EKSQIQNREKALKVLKARLFDMKLQ--EEQQKYAAQRKSAVG 296 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++G LD+ + A ++ Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIIDALTLAEQ 346 >gi|148266072|ref|YP_001232778.1| peptide chain release factor 1 [Geobacter uraniireducens Rf4] gi|189039974|sp|A5G8T7|RF1_GEOUR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|146399572|gb|ABQ28205.1| bacterial peptide chain release factor 1 (bRF-1) [Geobacter uraniireducens Rf4] Length = 355 Score = 228 bits (582), Expect = 9e-58, Method: Composition-based stats. Identities = 106/343 (30%), Positives = 178/343 (51%), Gaps = 9/343 (2%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + +R L DP + N E + L RE L + + + L + Sbjct: 1 MFEKIEELERRYQELEALLADPAVLGNQPEFRKLSREHSDLSALVESYRNYKKVLVEITG 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTES 130 EL + + + + + L+ + +E + + L D+ LE+ AG GG E+ Sbjct: 61 NRELLADPEMKEMAEAELEALEEQQAALEAEIKLLLLPKDPNDNKSVILEIRAGTGGDEA 120 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+AE +++ E + + E+ G K ++G + LK E G HR+ Sbjct: 121 ALFAGDLFRMYGRYAESNRWRVEVISASESEKGGFKEIVASVEGDGVFAKLKYESGTHRV 180 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS ++ + P + ++I+I+ +D +ID YR+SGAGGQHVNTTDSAV Sbjct: 181 QRVPETEAQGRIHTSACTVAIMP-EAEDVDIDINPADLKIDVYRSSGAGGQHVNTTDSAV 239 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG VV CQ+ERSQ KN+A+A +L+ ++ + +Q E+ A + K ++G G Sbjct: 240 RITHLPTGTVVACQEERSQIKNRAKAMKVLKTRILDTIMQ--EQSARLAADRKQQVGSGD 297 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P + D R + ++ GD+ + + Sbjct: 298 RSERIRTYNF-PQGRMTDHRIGLTLYRLDAIMAGDIGEITDSL 339 >gi|237807596|ref|YP_002892036.1| peptide chain release factor 1 [Tolumonas auensis DSM 9187] gi|259585258|sp|C4LBL5|RF1_TOLAT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|237499857|gb|ACQ92450.1| peptide chain release factor 1 [Tolumonas auensis DSM 9187] Length = 362 Score = 228 bits (582), Expect = 9e-58, Method: Composition-based stats. Identities = 119/339 (35%), Positives = 183/339 (53%), Gaps = 5/339 (1%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R + +P++ + + + L RE L ++ ++ Q D + E+ Sbjct: 9 LEGLMERYEEVQALLGEPNVVSDQDKFRALTREYSQLGEVVAGFQQYQQAEADLQAIEEM 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 +D + Q I+ Q L D ++ +LE+ AGAGG E+ Sbjct: 69 LSGDDAEMKAMAQEELAEAKQLIERVEAELQVLLLPKDPKDDSNCFLEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY++++E+R ++ E + DGE G K + ++G + YG +K E G HR+ R Sbjct: 129 FAGDLFRMYSKYSERRGWRMEIMSTSDGEHGGYKEIIVRMEGDSVYGIMKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P + + EI+ +D RIDT+RASGAGGQH+N TDSA+RI Sbjct: 189 VPETESQGRVHTSACTVMVLPEIPEKEIPEINPADLRIDTFRASGAGGQHINKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQ 311 THIPTG VV+CQ ERSQHKNKA+A ++L A+L + E KR A+ S G + Sbjct: 249 THIPTGTVVECQDERSQHKNKARAMSVLAARLAQQEEDKRRAEADSTRRSILSTGDRSDR 308 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P V D R N+ S+V++GDLD +K Sbjct: 309 IRTYNY-PQGRVSDHRINLTLYRLSEVMEGDLDSLLKPL 346 >gi|297539749|ref|YP_003675518.1| peptide chain release factor 1 [Methylotenera sp. 301] gi|297259096|gb|ADI30941.1| peptide chain release factor 1 [Methylotenera sp. 301] Length = 360 Score = 228 bits (581), Expect = 9e-58, Method: Composition-based stats. Identities = 116/344 (33%), Positives = 176/344 (51%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +RL +N + N+ + L +E + + + D + Sbjct: 9 LATLSERLEEINRLMSSEGVTNNMDNYRKLTQEHAEITPIVEQYHLFEQAEADIKEAQSM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D QE + + +VE Q L D + +LE+ AG GG ES + Sbjct: 69 LSDPDMKEFAQEEIEAGKEKLEQVEKSLQVLLLPKDPNDDKNLFLEIRAGTGGDESGLFC 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AEK+K+K E + ++ E G K I+G AY LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEKQKWKVEIMSANESEVGGYKEIIAKIEGYGAYSKLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ ++ I+ +D RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 189 DTETQGRIHTSACTVAVLPEADEVSDVVINPADIRIDTYRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 PTG+VV+CQ+ RSQH NKAQA +L A++ ++ ++ + I K+ IG G + Sbjct: 249 APTGIVVECQEGRSQHANKAQAMAVLAARIKAKQVDEQN--SKIASERKSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ + +GD+D+ + A A + Sbjct: 307 IRTYNY-PQGRITDHRINLTLYKIDAITEGDMDELIGALSAEHQ 349 >gi|123442667|ref|YP_001006644.1| peptide chain release factor 1 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|332161451|ref|YP_004298028.1| peptide chain release factor 1 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|166223618|sp|A1JRU0|RF1_YERE8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|122089628|emb|CAL12478.1| peptide chain release factor 1 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|318605428|emb|CBY26926.1| peptide chain release factor 1 [Yersinia enterocolitica subsp. palearctica Y11] gi|325665681|gb|ADZ42325.1| peptide chain release factor 1 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 360 Score = 228 bits (581), Expect = 9e-58, Method: Composition-based stats. Identities = 115/337 (34%), Positives = 176/337 (52%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D ++ + + L RE L + KE + D + Sbjct: 9 LEALQERHEEVLAHLGDANVIADQDRFRALSREYAQLTDVTRCFKEWRSVQDDIEAAEMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ R + + Q L D D +LE+ AG GG E+ +A Sbjct: 69 LDDPEMREMAQDELKEAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 + RMY+R+AE R++K E + +GE G K + G +G LK E G HR+ R+ Sbjct: 129 GDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGDGVFGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ EI+ D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR++ + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQQ--AEASERRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ +V++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQ 342 >gi|28868324|ref|NP_790943.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato str. DC3000] gi|32171519|sp|Q888C1|RF1_PSESM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|28851561|gb|AAO54638.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato str. DC3000] Length = 360 Score = 228 bits (581), Expect = 9e-58, Method: Composition-based stats. Identities = 117/346 (33%), Positives = 176/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + RE ++ ++ K++ D L Sbjct: 9 LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYKQLARVQGDLEGAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + + Q L D + +LE+ AG GG E+ Sbjct: 69 LKDSDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AE+R ++ E L ++GE G K ++G + YG LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI+ +D R+DTYR+SGAGGQHVN TDSA+RI Sbjct: 189 VPKTESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + Q + I K +G G Sbjct: 249 THLPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAASAIASERKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ S +VL G +D ++ LA + Sbjct: 307 ERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQ 351 >gi|238755548|ref|ZP_04616886.1| Peptide chain release factor 1 [Yersinia ruckeri ATCC 29473] gi|238706228|gb|EEP98607.1| Peptide chain release factor 1 [Yersinia ruckeri ATCC 29473] Length = 360 Score = 228 bits (581), Expect = 9e-58, Method: Composition-based stats. Identities = 117/337 (34%), Positives = 174/337 (51%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + KE Q D + Sbjct: 9 LEALQERHEEVEAHLGDATVIADQDRFRALSREYAQLTDVTRCFKEWQSVQEDIETAEMM 68 Query: 76 ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E D R + + Q L D +LE+ AG GG E+ +A Sbjct: 69 LDDPEMREMAQEELKDARTRSEALEQQLQVLLLPKDPDDERGCFLEIRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 + RMY+R+AE R++K E + DGE G K + G YG LK E G HR+ R+ Sbjct: 129 GDMFRMYSRYAEARRWKVEVMSASDGEHGGYKEIIAKVSGEGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ EI+ D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVMPEIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR+ + +G G + Sbjct: 249 LPTGLVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQ--LAEASERRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ +V++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQ 342 >gi|113869288|ref|YP_727777.1| peptide chain release factor 1 [Ralstonia eutropha H16] gi|113528064|emb|CAJ94409.1| protein chain release factor A (RF-1) [Ralstonia eutropha H16] Length = 356 Score = 228 bits (581), Expect = 9e-58, Method: Composition-based stats. Identities = 114/344 (33%), Positives = 175/344 (50%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +RL +N + + + L RE L + + D L Sbjct: 5 LDQLAERLDEVNALLAREDATAKIDQYRKLSREHAELSPVAEQYGQYRQAQDDLATAQAL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + + + +E Q L D + LE+ AG GG ES +A Sbjct: 65 LDDPEMKDFAADEIASARARLEGLEASLQRLLLPKDPNDDRNLLLEIRAGTGGEESALFA 124 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE+++++ E + + G K + I G A+ LK E G HR+ R+ Sbjct: 125 GDLLRMYTRYAERQRWQVEVMSESASDLGGYKEVIVRIAGDAAFSRLKFESGGHRVQRVP 184 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQHVN TDSAVR+TH Sbjct: 185 ATEAQGRIHTSACTVAVMPEADEVGEVEINPADLRIDTFRASGAGGQHVNKTDSAVRLTH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQH+NK +A +L A++ + +Q R A + + IG G + Sbjct: 245 LPTGIVVECQDDRSQHRNKDKAMKVLAARIKD--MQTRAAQAKEASTRRNLIGSGDRSDR 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ ++DGD+D+ + A + + Sbjct: 303 IRTYNF-PQGRVTDHRINLTLYKIDMIMDGDMDELLSALASEHQ 345 >gi|194016506|ref|ZP_03055120.1| peptide chain release factor 1 [Bacillus pumilus ATCC 7061] gi|194011979|gb|EDW21547.1| peptide chain release factor 1 [Bacillus pumilus ATCC 7061] Length = 355 Score = 228 bits (581), Expect = 9e-58, Method: Composition-based stats. Identities = 108/351 (30%), Positives = 177/351 (50%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + +R LN DP + + + + +E+ + + ++ + Sbjct: 1 MLDRLKSIEERYEKLNEYLSDPEVVNDPKKLREYSKEQSDIQETVEVYRQYRAAYDQLSE 60 Query: 72 LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + E+ D + + + + + + + D+ + +EV AGG Sbjct: 61 AKAMLEEKLDAEMRDMVKEEISELTEETERLEDELKILLIPKDPNDNKNVIVEVRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE + +KTE +E + G K +I G AY LK E G Sbjct: 121 EEAALFAGNLYRMYSRYAEMQGWKTEVMEANVTGTGGYKEIIFMISGKGAYSRLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +EI+I E D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EAEEVEIDIHEKDIRVDTFTSSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ +RE A ++ K+ +G Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKF--QREAQAEYDQTRKSAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L+G LD+ + A + + Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVIDALIMEDQ 347 >gi|251789676|ref|YP_003004397.1| peptide chain release factor 1 [Dickeya zeae Ech1591] gi|247538297|gb|ACT06918.1| peptide chain release factor 1 [Dickeya zeae Ech1591] Length = 360 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 115/337 (34%), Positives = 176/337 (52%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + +P + ++ + L RE L + + Q D + Sbjct: 9 LEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQCWQQTQDDLATAELM 68 Query: 76 ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + +E + + Q L D +LE+ AG GG E+ +A Sbjct: 69 LDDPEMRDLAQEELKAAKAASETLEQQLQVLLLPKDPDDERGCFLEIRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R++K E + DGE G K + G AYG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESRRWKVEIMSASDGEHGGYKEMIAKVVGDGAYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P V ++ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPEVPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLAARIRAAEMQKRQQE--EASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 IR+Y P V D R N+ + ++G LD ++ Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEAIEGKLDMLIQ 342 >gi|149910167|ref|ZP_01898813.1| putative peptide chain release factor 2 [Moritella sp. PE36] gi|149806753|gb|EDM66717.1| putative peptide chain release factor 2 [Moritella sp. PE36] Length = 301 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 160/298 (53%), Positives = 213/298 (71%), Gaps = 1/298 (0%) Query: 55 AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114 + I ++ D L+ELA+E +D E + ++ ++ +F + SG+ D+ Sbjct: 2 IVKTIDDLGTGCDDVEGLVELAVEAEDEETFAEAQHEIIGLEAQLAKLEFRRMFSGKHDA 61 Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 ND YL++ +G+GGTE+QDWANMLLRM+ RW E KFK E +E+ G+ AGIK AT+ + G Sbjct: 62 NDCYLDIQSGSGGTEAQDWANMLLRMFLRWGEAHKFKVELIEVSSGDVAGIKGATIRLGG 121 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 AYGWL+ E GVHRLVR SP+DS+ RRHTSF+SI+VYP +DDSIEI+++ SD RID YR Sbjct: 122 EYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASIFVYPEIDDSIEIDLNPSDLRIDVYR 181 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 ASGAGGQHVNTT+SAVRITH+PT +VVQCQ +RSQHKNK A +RAKL++ E+QK+ Sbjct: 182 ASGAGGQHVNTTESAVRITHLPTNLVVQCQNDRSQHKNKDAAMKQMRAKLFDHEMQKQNA 241 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 I E +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 242 EKQIAEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLK 298 >gi|94500021|ref|ZP_01306556.1| peptide chain release factor 1 [Oceanobacter sp. RED65] gi|94427879|gb|EAT12854.1| peptide chain release factor 1 [Oceanobacter sp. RED65] Length = 363 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 111/346 (32%), Positives = 177/346 (51%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +R + D + + + + L +E ++ + + + L Sbjct: 9 LQTLDERYEEIGHLLSDAGVISDQNKFRELSKEYAEIEPVVKAFAQYTQAEENLAEAEAL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 A ++D + + Q L D + LE+ AG GG E+ Sbjct: 69 AKDDDPDMREMGQEEYSAAKEEIERLDGELQILLLPKDPNDGKNVILEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMYTR+AEKR +K E + ++GE G K I G YG LK E G HR+ R Sbjct: 129 FSGDLFRMYTRYAEKRGWKCEVMSANEGEHGGYKEVITRIAGDGVYGQLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P +++ +++I+++D RIDT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPATESQGRIHTSACTVAVMPEIENEDDVDINKADLRIDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ+ERSQHKN+A+A ++L +L + +QK + K+ +G G Sbjct: 249 THLPTGLVVECQEERSQHKNRAKAMSILATRLNDAVVQKAQAEQ--AAERKSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +++ GD+D ++ L + Sbjct: 307 ERIRTYNY-PQGRVSDHRINLTVYKLDELMQGDVDMIIQPLLQEHQ 351 >gi|253583342|ref|ZP_04860540.1| peptide chain release factor RF1 [Fusobacterium varium ATCC 27725] gi|251833914|gb|EES62477.1| peptide chain release factor RF1 [Fusobacterium varium ATCC 27725] Length = 358 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 117/347 (33%), Positives = 181/347 (52%), Gaps = 10/347 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R LN P + + + + + + KE + + D + E Sbjct: 5 LEEVVKRFDELNELLGSPEVLADPKKMMECNKSLSDITPIVEKYKEYKRVIEDFDFIKEN 64 Query: 76 ALEEDDCSILQETSDNLQRIKL----EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + L+ ++ + + L E D + +E+ GAGG E+ Sbjct: 65 LKTEKDQEMKEMMHEELKELEESIPELEKELKVLLLPKDENDDKNVIIEIRGGAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AE++K+K E +E + GIK I G AY LK E GVHR+ Sbjct: 125 LFAGNLFRMYSRYAERKKWKIEIIEKQEMGIGGIKEVVFSINGFGAYSRLKFESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P V+D E++I D +IDTYR+ GAGGQHVN TDSAVR Sbjct: 185 RVPETESAGRVHTSTATVAVLPEVEDVKEVKIDPRDLKIDTYRSGGAGGQHVNMTDSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG++VQCQ ERSQ KN+ +A L +KL+E+E +K+ + + + ++G G Sbjct: 245 ITHLPTGIIVQCQDERSQLKNREKAMKHLASKLFEMECEKQR--SQVESERRLQVGTGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R LDGDLD+ + A + + Sbjct: 303 SEKIRTYNF-PQGRITDHRIKFTVYQLEAFLDGDLDEMIDALITFSQ 348 >gi|187734557|ref|YP_001876669.1| peptide chain release factor 1 [Akkermansia muciniphila ATCC BAA-835] gi|238691860|sp|B2UL99|RF1_AKKM8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|187424609|gb|ACD03888.1| peptide chain release factor 1 [Akkermansia muciniphila ATCC BAA-835] Length = 358 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 116/345 (33%), Positives = 176/345 (51%), Gaps = 10/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72 + QRL L T +P + + +A +MRE + L + + + +L DN L Sbjct: 7 IEKRRQRLEELETVIAEPDFFNDQKKASEIMREHRRLKELMETWDSLNATEQQLADNQEL 66 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + E E + ++ Q+ L + DA +E+ AG GG E+ Sbjct: 67 AKTDDPELAELAALEIPELEAALEKLRSDVQYSLLPRDTTEDRDAIIEIRAGTGGDEASL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A LLRMY R+AE+R ++ E LE + G K I G + +LK E GVHR+ R Sbjct: 127 FAGDLLRMYQRFAEERGWRFEHLESSPSDVGGFKEVVCRIAGEEVFRFLKYEGGVHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ V P + ++IEI D RI+ R+ GAGGQHVN T+SAV+I Sbjct: 187 VPATETQGRIHTSTATVAVMP-EAEEVDIEIRPEDLRIEVCRSGGAGGQHVNKTESAVQI 245 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 HIPTGV V+C++ERSQ KN+ + +LRAKL+ E +KREE + + IG G Sbjct: 246 WHIPTGVYVRCEEERSQMKNREKGMKILRAKLF--EAKKREEAEKYSAARRNLIGSGGRE 303 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D R + +L G L+D + A + Sbjct: 304 EKIRTYNF-PQNRLTDHRIGYTSHNLDGILMGQLEDLIMALQHAE 347 >gi|331018122|gb|EGH98178.1| peptide chain release factor 1 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 360 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 117/346 (33%), Positives = 176/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + RE ++ ++ K++ D L Sbjct: 9 LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYKQLARVQGDLEGAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + + Q L D + +LE+ AG GG E+ Sbjct: 69 LKDSDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AE+R ++ E L ++GE G K ++G + YG LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI+ +D R+DTYR+SGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+P+G+VV+CQ+ERSQHKN+A+A + L AKL + Q + I K +G G Sbjct: 249 THLPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAASAIASERKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ S +VL G +D ++ LA + Sbjct: 307 ERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQ 351 >gi|330719389|ref|ZP_08313989.1| peptide chain release factor 1 [Leuconostoc fallax KCTC 3537] Length = 359 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 110/350 (31%), Positives = 173/350 (49%), Gaps = 9/350 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +F+ V R LN DP + + L +E + ++ K+ Q L D Sbjct: 3 KIFEQLQTVVDRHDELNELLADPEVMSDSKRYMALSKEEGSIRETVTVFKQYQSVLQDIQ 62 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTE 129 +L + D + ++ L+ K +E + + L D + +E+ AGG E Sbjct: 63 DAEDLLDDTDMAELARDDLKTLKPQKASLEEQLKVLMLPQDPNDDKNIIMEIRGAAGGDE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 S +A LL MY ++AEK+ + ++ E G K ++I G N Y LK E G HR Sbjct: 123 SSLFAADLLDMYRKYAEKQNWHINLIDESATEVGGYKEVVVMITGNNVYSKLKFESGAHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE-ISESDCRIDTYRASGAGGQHVNTTDS 248 + R+ ++ R HTS +++ V P +D + I D R D YR+SGAGGQHVN T S Sbjct: 183 VQRVPVTETQGRVHTSTATVGVMPEFEDVDATDLIDPKDVREDVYRSSGAGGQHVNKTSS 242 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 A+R+TH PTG+ V Q ERSQ +N+A+AW +L A++Y+ Q+ E + KT +G Sbjct: 243 AIRLTHEPTGITVAMQDERSQQQNRAKAWKILNARVYDYFAQQNEAE--YAQKRKTAVGT 300 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + V++G+L+D + A + + Sbjct: 301 GDRSERIRTYNF-PQNRVTDHRIGLTLNKLDRVMNGELEDIIDALIIADQ 349 >gi|327398507|ref|YP_004339376.1| peptide chain release factor 2 [Hippea maritima DSM 10411] gi|327181136|gb|AEA33317.1| peptide chain release factor 2 [Hippea maritima DSM 10411] Length = 359 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 160/354 (45%), Positives = 235/354 (66%), Gaps = 4/354 (1%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 ++L+ ++N + D + L + + ED +W + + L R++ ++ + ++ Sbjct: 6 IQLADKINKIKEYLDPPKRKKELDDIQKQLEDSSVWNDYQLLQNLKRKQSSIEQKLKTVE 65 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 E+++ + L L E +++ DN++ + +VE + E+ LSGE D ++A + Sbjct: 66 ELENDVDTLLELSEFVEDDESYKQE--LEDNIKELTKKVEKAETETFLSGEHDFSNAIVT 123 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 +H+GAGGTES DW +ML RMY+ W + ++K E +++ G+EAG KS T L+ G AYG+ Sbjct: 124 IHSGAGGTESCDWVSMLFRMYSMWCDNNEYKIEVMDLQPGDEAGYKSITFLVSGEKAYGY 183 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E GVHRLVRISP+D+N RRHTSF+S+ V P ++D EI+I D +IDT+RASGAGG Sbjct: 184 LKNENGVHRLVRISPFDANKRRHTSFASVSVLPEINDDTEIDIDPKDLKIDTFRASGAGG 243 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QHVN TDSA+RITHIPTG+VV CQ ERSQHKNKA A +L+AKLY+LE +K+++ E Sbjct: 244 QHVNKTDSAIRITHIPTGIVVSCQNERSQHKNKAFALKILKAKLYQLEEEKKKKELEKLE 303 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS--DVLDGDLDDFMKATLA 352 K +I WG QIRSYVL PY+MVKD RT +EK + VL+G++DDF++ L Sbjct: 304 GEKKKIEWGSQIRSYVLHPYKMVKDHRTGVEKKDVAALAVLNGEIDDFIREALK 357 >gi|261253598|ref|ZP_05946171.1| peptide chain release factor 1 [Vibrio orientalis CIP 102891] gi|260936989|gb|EEX92978.1| peptide chain release factor 1 [Vibrio orientalis CIP 102891] Length = 362 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 117/346 (33%), Positives = 183/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R + DP + N + + L +E L+ + Q D + E+ Sbjct: 9 LETLVERYEEVQHLLGDPDVIGNQDKFRALSKEYSQLEEVTKCFQAYQQAQEDLVAAEEM 68 Query: 76 ALEEDDCSILQETS---DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 A E+D+ D + I+ + Q L D + +LE+ AGAGG E+ Sbjct: 69 AKEDDEEMREMAQEEIKDAKETIERLNDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AEK+ ++ E + ++ E G K + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSKFAEKKGWRVEVMSSNESEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RI Sbjct: 189 VPATESQGRVHTSACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311 TH+PTG VV+CQ ERSQHKNKA+A +L A++ + E KR + ++ + +G G + Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARIIQAEEAKRAAE--VSDTRRNLLGSGDRS 306 Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ ++V++GD+ + + + Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTVYRLNEVMEGDVSCLVDPVIQEHQ 351 >gi|253574239|ref|ZP_04851581.1| peptide chain release factor 1 [Paenibacillus sp. oral taxon 786 str. D14] gi|251846716|gb|EES74722.1| peptide chain release factor 1 [Paenibacillus sp. oral taxon 786 str. D14] Length = 355 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 107/351 (30%), Positives = 182/351 (51%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + R L+ DP + + + +E+ L A E ++ + + Sbjct: 1 MLDRLQSLADRYEKLSELLCDPDVANDSKRLRDYSKEQSDLQPAYEAYTEYKNVIGELEA 60 Query: 72 LLELALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + E+ D + + ++ R + E + L D + +E+ AGG Sbjct: 61 AKAMQAEKLDDEMREMVKMEIEELTARQQALEEKIRILLLPKDPNDDKNVIVEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR+A+ + ++ E +++++ + G K +I G AY LK E G Sbjct: 121 DEAALFAADLYRMYTRYADSQGWRVEVMDMNESDLGGFKEVIFMINGKGAYSKLKYESGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +S R HTS S++ V P + ++IEI + D R+DT+ +SGAGGQ VNTT Sbjct: 181 HRVQRIPATESGGRIHTSTSTVAVLP-EVEEVDIEILDKDIRVDTFCSSGAGGQSVNTTK 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V CQ +SQ+ NK +A +LRA++Y+ ++++EE A K+++G Sbjct: 240 SAVRVTHIPTGIVATCQDGKSQNSNKEKALQVLRARIYD--MKRQEEEAKYAGERKSKVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + V++G+L++ + A ++ Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTLHKLDQVMNGELEEIVSALTIAEQ 347 >gi|313157406|gb|EFR56829.1| putative peptide chain release factor 2 [Alistipes sp. HGB5] Length = 370 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 131/358 (36%), Positives = 205/358 (57%), Gaps = 11/358 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ L + + L KT+ P W N +A+ +R + + + Sbjct: 10 LEQRSGALERCLNIEQKRIDLLNEEEKTQVPDFWDNPDQAREQLRRVAAIKAWVDDYDAV 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + D ++ E + QE + + +E + ++L + D A L+++ Sbjct: 70 AKDVEDLALMPEFVK--EGVVSEQEMDAHYAQTLERIEKLEMRNMLRRDEDKLGAILDIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DWA+MLLRMYTRW E +K + L+ G+E G+KS TL +G AYG+LK Sbjct: 128 AGAGGTEALDWASMLLRMYTRWGEAHGYKVKVLDYQAGDEVGVKSCTLEFEGEYAYGYLK 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHR+VR+SP+++N++R T+F+S++V P VDD+IE+ ++ SD DT+RASGAGGQ+ Sbjct: 188 SENGVHRMVRLSPFNANNKRQTTFASVFVSPAVDDTIEVTVNPSDIEWDTFRASGAGGQN 247 Query: 243 VNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 VN ++AVR+ + +++ + RSQ N+ A +L++KLY+ EL KR Sbjct: 248 VNKVETAVRLRYHGKDADTGEAVEFLIENMETRSQLMNRENAMRILKSKLYQRELDKRMA 307 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+SK +I WG QIRSYV + VKD RT ++ ++ V+DG LD+F+KA L Sbjct: 308 TQQALEASKKKIEWGSQIRSYVFDD-RRVKDHRTGVQTSAVEAVMDGGLDEFIKAYLM 364 >gi|332971801|gb|EGK10749.1| peptide chain release factor RF1 [Desmospora sp. 8437] Length = 358 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 115/347 (33%), Positives = 178/347 (51%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ QR LN +P + N + +E+ L+ E ++ + Sbjct: 8 LESIRQRYEELNQLLSNPEVIHNADLLRKYSKEQSDLEPKYHAYCEYKEVADQYEEARIM 67 Query: 76 ALEEDDCSI----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EE D + E R K E + L D + +E+ AGG E+ Sbjct: 68 LEEESDPEMLDLVKTELEQLSDRKKALEEEIRLLLLPKDPNDDKNVIVEIRGAAGGEEAA 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYTR+ E+ +K+E L+ + G K ++G AY LK E G HR+ Sbjct: 128 LFAADLYRMYTRYGERMGWKSEILDTNTTGLGGFKEVVFSVQGQGAYSRLKYESGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + +++EI + D RIDT+ +SG GGQ VNTT SAVR Sbjct: 188 RVPTTESGGRIHTSTATVAVLP-EAEEVDVEIQDKDLRIDTFCSSGPGGQSVNTTKSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV CQ E+SQ KNK +A +LRA+L L+ +++EE A + ++ K ++G G Sbjct: 247 ITHLPTGIVVSCQDEKSQIKNKEKAMRVLRARL--LDQKQQEEEAKMADARKVQVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + V+DGDLD+ + A + ++ Sbjct: 305 SERIRTYNF-PQSRVTDHRIGLTLHKLDLVMDGDLDEIVDALVLEEQ 350 >gi|189424095|ref|YP_001951272.1| peptide chain release factor 1 [Geobacter lovleyi SZ] gi|238692126|sp|B3E628|RF1_GEOLS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189420354|gb|ACD94752.1| peptide chain release factor 1 [Geobacter lovleyi SZ] Length = 355 Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats. Identities = 117/348 (33%), Positives = 179/348 (51%), Gaps = 9/348 (2%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + R L + DP + N E + L RE L I + + L + Sbjct: 1 MFDKIQDLEIRFQELESLLSDPTVIANQPEFRKLSREHADLAPLIEAFRRYKKVLDELEE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 EL + + + +E L + K + L DS D LE+ AG GG ES Sbjct: 61 NQELLADPEMKEMAEEEISRLSQEKERLDAEIKILLLPKDPNDSRDVILEIRAGTGGDES 120 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 ++ L RMY+R+AEK ++K E L + E G K I+G + Y LK E G HR+ Sbjct: 121 ALFSGDLFRMYSRFAEKNRWKVEMLSCSESERGGYKEVIASIEGQDVYAKLKYESGTHRV 180 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS ++ + + ++I+I+ +D +ID YR+SGAGGQHVNTTDSAV Sbjct: 181 QRVPETEAQGRIHTSACTVAIMA-EAEDVDIDINPADLKIDVYRSSGAGGQHVNTTDSAV 239 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG VV CQ+ERSQ KN+A+A +L+ ++ + Q++ A + K ++G G Sbjct: 240 RITHIPTGTVVACQEERSQIKNRAKAMKVLKTRILDTIQQEQN--AKLAADRKQQVGSGD 297 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + ++ GD+++ A A + Sbjct: 298 RSERIRTYNF-PQGRMTDHRIGLTLYRLDSIMAGDIEEITDALRAHYQ 344 >gi|157962943|ref|YP_001502977.1| peptide chain release factor 1 [Shewanella pealeana ATCC 700345] gi|189039992|sp|A8H7A5|RF1_SHEPA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|157847943|gb|ABV88442.1| peptide chain release factor 1 [Shewanella pealeana ATCC 700345] Length = 361 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 113/346 (32%), Positives = 182/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R + D + + + L +E L++ +S K Q D E+ Sbjct: 9 LEGLLERNEEVLALLSDAGVIADQERFRALSKEYSQLEDVVSTFKSFQQAEEDLESAKEM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLE---VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + + Q L D N+ ++E+ AGAGG E+ Sbjct: 69 MEEDDPELKEMAQEEYKVAKSAIAALEDELQILLLPKDPNDDNNCFIEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE ++++ E + ++GE G K I G YG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAESKRWQIEVMNTNEGEHGGFKEVIAKISGEGVYGKLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P V ++ IEI+++D ++DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRVHTSACTVIVLPEVPEAEAIEINKADLKVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV+CQ +RSQHKN+AQA ++L A++ +E +KR + + + G Sbjct: 249 THIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEE--STRRNLVSSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V + R N+ + ++GD+D ++ + + Sbjct: 307 ERIRTYNF-PQGRVSEHRINLTLYRLGEFMEGDIDCVVEPLIQENQ 351 >gi|302339534|ref|YP_003804740.1| peptide chain release factor 1 [Spirochaeta smaragdinae DSM 11293] gi|301636719|gb|ADK82146.1| peptide chain release factor 1 [Spirochaeta smaragdinae DSM 11293] Length = 355 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 115/342 (33%), Positives = 178/342 (52%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ R + + + +P +++ K L +E L + + ++ L +L Sbjct: 5 LESIASRFTEIEERLGEPDTMKDMHLYKELSQEHAALKDTVEEFGHYKELLSGIEETKQL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQF----ESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + L+ +K +E + + D + +E+ AG GG E+ Sbjct: 65 LESESDHEMREMAEVELEELKDHLEKSEKRLKTLLVPKDPLDGKNTIIEIRAGTGGDEAS 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R++E++ +K E +E D E G K I G YG L+ E GVHR+ Sbjct: 125 LFAADLYRMYSRFSEQKGWKLEMMESSDTEVGGFKEVIFSISGKEVYGNLRYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS ++ V P + + IS D +ID +R+SG GGQ VNTTDSAVR Sbjct: 185 RVPSTESQGRIHTSAVTVAVLPEAEKTDID-ISPEDLKIDVFRSSGPGGQSVNTTDSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTGVVV CQ E+SQ KNKA+A +LRA+LYE E K+ + + K++IG G Sbjct: 244 VTHIPTGVVVTCQDEKSQLKNKAKALRVLRARLYEAEEMKQRKERDQA--RKSQIGSGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R N+ V++G L++ + A Sbjct: 302 SERIRTYNF-PQNRVTDHRINLTLYKLDQVMEGALNELIDAL 342 >gi|300726271|ref|ZP_07059724.1| peptide chain release factor 2 [Prevotella bryantii B14] gi|299776468|gb|EFI73025.1| peptide chain release factor 2 [Prevotella bryantii B14] Length = 376 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 127/357 (35%), Positives = 206/357 (57%), Gaps = 12/357 (3%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 + L + D +T+ P W + A+ M++ + + + KE++ Sbjct: 12 ERTEALYRYLNIDQKKVEFEEEQLRTQAPDFWDDPKYAQEQMKKVKEIQKWLDGYKEVRQ 71 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 + + E D+ +E D+ + +E + +++L E DS DA L++++G Sbjct: 72 YADELQLAFEFYK--DEMVTEEEVDDDYAKAIKAIENLELKNMLRQEEDSMDAVLKINSG 129 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWLKG 183 AGGTESQDWA+ML+RMY RW E + + + DG+EAGIKS + I+ G AYG+LK Sbjct: 130 AGGTESQDWASMLMRMYMRWCEAHGYSVKITNMQDGDEAGIKSVEMTIEGGEFAYGFLKS 189 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR+SPY++ +R TSF+S++V P+VDD+IEI + + DT+R+ GAGGQ+V Sbjct: 190 ENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEIYVDPAKVSWDTFRSGGAGGQNV 249 Query: 244 NTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 N +S VR+ + ++++ + R Q KN+A+A +L+++LY+ L++++ Sbjct: 250 NKVESGVRLRYQYEDPDTGEHEEILIENTETRDQPKNRAKAMLLLKSQLYDRALKRKQAE 309 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ K +I WG QIRSYV + VKD RTN + + V+DG LD+F+K+ L Sbjct: 310 QAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKLDEFIKSYLM 365 >gi|312869581|ref|ZP_07729732.1| peptide chain release factor 1 [Lactobacillus oris PB013-T2-3] gi|311094867|gb|EFQ53160.1| peptide chain release factor 1 [Lactobacillus oris PB013-T2-3] Length = 362 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 108/355 (30%), Positives = 180/355 (50%), Gaps = 12/355 (3%) Query: 9 CLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD--- 64 + +FD R LN DP + + L +E L + E + Sbjct: 2 EISEIFDKLQAVTDRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKQVTQ 61 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHA 123 + D+ +L + D ++ ++ + + ++E + + + D + +E+ Sbjct: 62 TIKDDEEMLRETNDPDLAAMTKDELAESKDRQEQLEKELEVLLIPKDPNDDKNIIMEIRG 121 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 AGG E+ +A L MY +AEK+ +K E ++ ++ E G K L+I G N Y LK Sbjct: 122 AAGGDEASLFAADLYNMYLHYAEKQGWKVEVVDKNETEVGGFKEIALMITGNNVYSKLKF 181 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G HR+ R+ +S R HTS +++ V P + ++++I D R+D YR+SGAGGQHV Sbjct: 182 ENGAHRVQRVPVTESAGRVHTSTATVGVMP-EAEDVDVDIDPKDIRVDVYRSSGAGGQHV 240 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SAVR+TH+PTG+VV Q ERSQ +N+A+A +L++++Y+ QK E + E K Sbjct: 241 NKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYYQQK--EQSAYDEQRK 298 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IG G +IR+Y P V D R + ++ G+LD+ ++A + + Sbjct: 299 NAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGELDEIIEALIVADQ 352 >gi|294341235|emb|CAZ89636.1| Peptide chain release factor 1 (RF-1) [Thiomonas sp. 3As] Length = 358 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 123/344 (35%), Positives = 187/344 (54%), Gaps = 8/344 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 L D + +R L+ P ++ + + RE L + + + + D Sbjct: 4 SLLDKLEQMQRRADELDALLAAPDCTADLQRFRNMTRELAELQAVVGLYVQYKTKTEDLS 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTE 129 L + D + Q+ + + +E + Q L DS + ++E+ AG GG E Sbjct: 64 QAESLLSDPDMKELAQQEIQDARAALDALEARLQVALLPRDPDDSRNVFVEIRAGTGGEE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 S +A LLRMY R+AE++++ TE + + G K L + G AYG LK E G HR Sbjct: 124 SALFAADLLRMYARYAERKRWTTEVISESPSDLGGYKEVILRVAGEGAYGLLKYESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ ++ R HTS +++ V P VD++ I+I+ SD RIDT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPKTETQGRIHTSAATVAVMPEVDEAQAIQINPSDLRIDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 +RITH+PTG+VV+CQ ERSQH+NKA+A ++L A+L E E Q R+ + K+ +G G Sbjct: 244 IRITHLPTGLVVECQDERSQHRNKARALSVLAARLAERERQARQAE--EAATRKSLVGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V + R N+ +LDGDLD+ + A Sbjct: 302 DRSDRIRTYNF-PQGRVSEHRINLTLYKIDAILDGDLDELLTAL 344 >gi|282878031|ref|ZP_06286839.1| putative peptide chain release factor 2 [Prevotella buccalis ATCC 35310] gi|281299866|gb|EFA92227.1| putative peptide chain release factor 2 [Prevotella buccalis ATCC 35310] Length = 374 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 126/357 (35%), Positives = 206/357 (57%), Gaps = 12/357 (3%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 + L + D +T+ P W++ A+ M + + ++ + ++++ Sbjct: 12 ERAEALHRYLNIDQKKVEFEEEQLRTQAPDFWEDPKRAQEQMIKVKGIEKWLVGYQQVRQ 71 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 + + + D+ E + + +E+ + +++L D D +++++G Sbjct: 72 LADELELAFDFY--RDEMITEDELDADYAKAVAAIEHLEMKNMLRQTEDPMDCVMKINSG 129 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PNAYGWLKG 183 AGGTESQDWA ML+RMY RWAE +K +I DG+EAGIKS T+ I+G AYG+LK Sbjct: 130 AGGTESQDWAQMLMRMYMRWAEAHDYKCTISDIQDGDEAGIKSVTMKIEGGEYAYGYLKS 189 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR+SP+++ +R TSF+S++V P+VDD+IE+ + + DT+R+SGAGGQ+V Sbjct: 190 ENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDTIEVFVDPARVSWDTFRSSGAGGQNV 249 Query: 244 NTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 N +S VR+ + ++++ + R Q KN+A+A +L+++LY+ ++KR E Sbjct: 250 NKVESGVRLRYQYEDPDTGEEEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRLEA 309 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E+ K +I WG QIRSYV + VKD RTN + T V+DG LD+F+KA L Sbjct: 310 QAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTTDVDAVMDGKLDEFIKAYLM 365 >gi|288942095|ref|YP_003444335.1| peptide chain release factor 1 [Allochromatium vinosum DSM 180] gi|288897467|gb|ADC63303.1| peptide chain release factor 1 [Allochromatium vinosum DSM 180] Length = 359 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 117/342 (34%), Positives = 180/342 (52%), Gaps = 9/342 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + +P + + L RE L + + +D D EL Sbjct: 9 LERIAERFGEVMALLAEPETQSDQGRFRDLSREYAQLQPLMECYERYRDAERDLAAAEEL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGAGGTESQDW 133 + + + L R +L+V + ++ + D +A+LE+ AG GG E+ + Sbjct: 69 LTDPE-MAALARDEIEAARERLDVLEPELQTLLIPPDPNDQCNAFLEIRAGTGGAEAALF 127 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A L+RMY R+AE ++TE + +GE G K + + G Y LK E G HR+ R+ Sbjct: 128 AGDLMRMYMRYAELLGWRTEQVSASEGELGGYKEVVIRVSGSGVYSRLKFEPGAHRVQRV 187 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +S R HTS ++ V P + IEI+ +D RIDTYR+SGAGGQHVN TDSA+RIT Sbjct: 188 PETESQGRIHTSACTVAVLPEAESIDAIEINSNDLRIDTYRSSGAGGQHVNKTDSAIRIT 247 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H+P+G+VV+CQ+ERSQHKN+A+A ++L AKL + + + ES K ++G G Sbjct: 248 HLPSGIVVECQEERSQHKNRAKAMSLLHAKLLAGARETQ--ASEQSESRKLQVGSGDRSE 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P + D R N+ +V+ G LD ++ LA Sbjct: 306 RIRTYNF-PQNRLTDHRINLTLYKLDEVMTGQLDQVIEPLLA 346 >gi|315649892|ref|ZP_07902974.1| peptide chain release factor 1 [Paenibacillus vortex V453] gi|315274691|gb|EFU38073.1| peptide chain release factor 1 [Paenibacillus vortex V453] Length = 355 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 106/351 (30%), Positives = 181/351 (51%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + R L+ DP + + + + +E+ L A E ++ + + Sbjct: 1 MLDRLQSLADRYEKLSELLCDPDVANDSKKLRDYSKEQSDLQPAYEAYVEYKNVIEELEA 60 Query: 72 LLELALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + E+ D + + ++ R + E + L D + +E+ AGG Sbjct: 61 AKTMQGEKMDDEMREMVKMEIEELSTRERELAEKIRILLLPKDPNDDKNVIIEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A+ L RMYTR+A+ + +K E ++++ + G K +I G AY +K E G Sbjct: 121 DEAALFASDLYRMYTRYADTQGWKVELMDVNTNDLGGFKEVIFMINGRGAYSKMKFESGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +S R HTS S++ V P + ++IEI + D R+DT+ +SGAGGQ VNTT Sbjct: 181 HRVQRIPTTESGGRIHTSTSTVAVMP-EAEEVDIEIHDKDIRVDTFCSSGAGGQSVNTTK 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V CQ +SQ+ NK +A +LRA+++++ Q EE A K+++G Sbjct: 240 SAVRVTHIPTGIVATCQDGKSQNSNKDKALQVLRARIFDMMRQ--EEEAKYAGERKSKVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + V++G++++ + A ++ Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTVHKLDQVMNGEIEEIVSALTIAEQ 347 >gi|297588765|ref|ZP_06947408.1| peptide chain release factor RF1 [Finegoldia magna ATCC 53516] gi|297574138|gb|EFH92859.1| peptide chain release factor RF1 [Finegoldia magna ATCC 53516] Length = 355 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 116/351 (33%), Positives = 195/351 (55%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ D+ V + L K DP + ++ LM+E L+ ++ +D L + Sbjct: 1 MFENLDSVVDKFKDLEVKVADPEVIADMENWTKLMKEHADLEPVVNKYLSYKDNLKNLEE 60 Query: 72 LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 E+ D + + D ++I+ + E + L D + ++E+ AGAGG Sbjct: 61 DKEMLGTTGDSEMEELLKDEISTLEEQIEKDQEDLKILLLPKDPNDEKNVFIEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A LLRMY +++K+++ TE ++I GIK +++KG AY LK E GV Sbjct: 121 DEAGLFAGELLRMYQMYSDKKRWTTEIMDIQQQGVGGIKEVVMMVKGKGAYSRLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S+ R HTS +++ V P + ++++I + D RID +RASG GGQ VNTTD Sbjct: 181 HRVQRVPQTESSGRIHTSTATVAVLP-EAEDVDVKIEQKDLRIDVFRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTG+VV CQ E+SQ KNK +A +L+++LY+L +++ + ++ K+++G Sbjct: 240 SAVRITHIPTGLVVTCQDEKSQIKNKDKAMKVLKSRLYDLMEEEKN--KDRADARKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P + D R N + LDGD+++ + + + Sbjct: 298 TGDRSERIRTYNF-PQGRITDHRINKTIFQLQNFLDGDIEEMIDDLTSYDQ 347 >gi|227824241|ref|ZP_03989073.1| peptide chain release factor [Acidaminococcus sp. D21] gi|226904740|gb|EEH90658.1| peptide chain release factor [Acidaminococcus sp. D21] Length = 359 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 110/355 (30%), Positives = 185/355 (52%), Gaps = 16/355 (4%) Query: 13 LFD----WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK---EIQDR 65 +F+ R L K DP + + + + + L + + + ++Q Sbjct: 1 MFEHLDKLQALEDRYIDLEAKISDPSVISDQAQWQKYTKAHAKLTDVVETYRAYQKLQKT 60 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF--ESLLSGEADSNDAYLEVHA 123 D+ LLE+ +++ + + E +LE K+ L D + +E+ A Sbjct: 61 YDDDQALLEMGESDEELAAMAEMEMKELAPQLEDYEKRLTILLLPKDPNDEKNIIMEIRA 120 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGG E+ +A L RMYTR+AE + ++ E ++ G K ++ G + Y +K Sbjct: 121 GAGGDEAALFAGDLFRMYTRYAETKGWRVELMDSSPTGLGGFKEVIFMVSGSDVYSHMKF 180 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHR+ R+ ++ R HTS +++ V P + ++++I SD RIDTYRA GAGGQ+V Sbjct: 181 ESGVHRVQRVPETEAQGRIHTSTATVAVMP-EAEEVDVDIKMSDIRIDTYRAGGAGGQYV 239 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVR+THIPTG+V QCQ E+SQ KN+ + +LR+++YE + A + Sbjct: 240 NKTESAVRMTHIPTGIVAQCQDEKSQAKNREKCLRVLRSRIYEAAQ--EAQRAAEESERR 297 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +++G G +IR+Y P V D R + +DV++GDLD+ + A + ++ Sbjct: 298 SQVGTGDRSERIRTYNF-PQGRVTDHRIGLTLHKLTDVMNGDLDELLGALMTEEQ 351 >gi|169824785|ref|YP_001692396.1| peptide chain release factor 1 [Finegoldia magna ATCC 29328] gi|303235021|ref|ZP_07321645.1| peptide chain release factor 1 [Finegoldia magna BVS033A4] gi|238687758|sp|B0S2B6|RF1_FINM2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|167831590|dbj|BAG08506.1| bacterial peptide chain release factor 1 [Finegoldia magna ATCC 29328] gi|302493876|gb|EFL53658.1| peptide chain release factor 1 [Finegoldia magna BVS033A4] Length = 355 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 117/351 (33%), Positives = 194/351 (55%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ D+ V + L K DP + ++ LM+E L+ ++ +D L + Sbjct: 1 MFENLDSVVDKFKDLEVKVADPEVIADMENWTKLMKEHADLEPVVNKYLSYKDNLKNLEE 60 Query: 72 LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 EL D + + D ++I+ + E + L D + ++E+ AGAGG Sbjct: 61 DKELLGTTGDSEMEELLKDEISTLEEQIEKDQEELKILLLPKDPNDEKNVFIEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A LLRMY +++K+ + TE ++I GIK +++KG AY LK E GV Sbjct: 121 DEAGLFAGELLRMYQMYSDKKHWTTEIMDIQQQGVGGIKEVVMMVKGKGAYSRLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S+ R HTS +++ V P + ++++I + D RID +RASG GGQ VNTTD Sbjct: 181 HRVQRVPQTESSGRIHTSTATVAVLP-EAEDVDVKIEQKDLRIDVFRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTG+VV CQ E+SQ KNK +A +L+++LY+L +++ + ++ K+++G Sbjct: 240 SAVRITHIPTGLVVTCQDEKSQIKNKDKAMKVLKSRLYDLMEEEKN--KDRADARKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P + D R N + LDGD+++ + + + Sbjct: 298 TGDRSERIRTYNF-PQGRITDHRINKTIFQLQNFLDGDIEEMIDDLTSYDQ 347 >gi|157694096|ref|YP_001488558.1| peptide chain release factor 1 [Bacillus pumilus SAFR-032] gi|166977360|sp|A8FID1|RF1_BACP2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|157682854|gb|ABV63998.1| peptide chain release factor RF1 [Bacillus pumilus SAFR-032] Length = 355 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 107/351 (30%), Positives = 176/351 (50%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + +R LN DP + + + + +E+ + + ++ + Sbjct: 1 MLDRLKSIEERYEKLNEYLSDPEVVNDPTKLREYSKEQSDIQETVEVYRQYRAAYDQLSE 60 Query: 72 LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + ++ D + + + + + + + D+ + +EV AGG Sbjct: 61 AKAMLEDKLDAEMRDMVKEEISELTEETERLEDELKILLIPKDPNDNKNVIVEVRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE + +KTE +E G K +I G AY LK E G Sbjct: 121 EEAALFAGNLYRMYSRYAEMQGWKTEVMEASVTGTGGYKEIIFMISGKGAYSKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +EI+I E D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EAEEVEIDIHEKDIRVDTFTSSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ +RE A ++ K+ +G Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKF--QREAQAEYDQTRKSAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L+G LD+ + A + + Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVIDALIMEDQ 347 >gi|147679165|ref|YP_001213380.1| protein chain release factor A [Pelotomaculum thermopropionicum SI] gi|189039982|sp|A5CYC3|RF1_PELTS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|146275262|dbj|BAF61011.1| protein chain release factor A [Pelotomaculum thermopropionicum SI] Length = 349 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 109/343 (31%), Positives = 179/343 (52%), Gaps = 11/343 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ ++ L +P + ++ + ++ L + ++ ++ + + + + L Sbjct: 5 LDSIEKKYEELENLIGNPEIIADIARWQEYVKAHAELADIVAVYRDYKKVVKEIQDTIAL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 EE D + + L + + + + L D + LE+ AG GG E+ Sbjct: 65 MKEEPDEDLREMAQAELDELTEKKDNLENRLKMLLLPKDPNDEKNVILEIRAGTGGEEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AE++ ++TE L+ + + G K LI+G Y +K E GVHR+ Sbjct: 125 LFAADLFRMYSRYAERQGWRTEILDANYTDIGGFKEVISLIEGKGVYSRMKFESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ V P + ++++I D RID + +SG GGQ VNTT SAVR Sbjct: 185 RIPTTESGGRIHTSAATVAVLP-EAEEVDVQIDPDDLRIDVFCSSGHGGQSVNTTQSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIPTG+VV Q E+SQHKNK +A +LRA+L + Q+ ++ I + K+ +G G Sbjct: 244 ITHIPTGIVVSMQDEKSQHKNKEKAMKVLRARLLDRVQQEHQQ--KIASTRKSMVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R + VLDGDLD+ + + Sbjct: 302 SERIRTYNF-PQNRVTDHRVGLTLHRLDSVLDGDLDEIIDTLI 343 >gi|159898428|ref|YP_001544675.1| peptide chain release factor 2 [Herpetosiphon aurantiacus ATCC 23779] gi|159891467|gb|ABX04547.1| peptide chain release factor 2 [Herpetosiphon aurantiacus ATCC 23779] Length = 337 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 144/333 (43%), Positives = 205/333 (61%), Gaps = 6/333 (1%) Query: 25 FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84 L + +P LW N +A+ +++ + + + L LL+L DD Sbjct: 3 DLEHQAAEPSLWDNPQQAQSILQRLARMQEELKMWDSLAVDLATLRDLLQL--SADDADS 60 Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 L + + + V+ + LL + DS +A++ + +GAGG ESQDWA MLLRMY+RW Sbjct: 61 LSQIEREVNGLTKSVDQLELSILLGEKYDSTNAFISIQSGAGGVESQDWAQMLLRMYSRW 120 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 E + F+T +++ DGEEAGIKSATL ++GP AYG+ K E G+HRLVR+SP+D+N RRHT Sbjct: 121 GESQGFRTTIVDMMDGEEAGIKSATLELRGPYAYGYAKAEAGIHRLVRLSPFDANHRRHT 180 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI---PTGVVV 261 SF+ + V P VDD+ E++I+ D R+D YRA G GGQ VNTTDSAVR+ + P ++V Sbjct: 181 SFARVEVLPEVDDAAEVKINPEDLRVDVYRAGGHGGQGVNTTDSAVRLVYRGGTPDEIIV 240 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 CQ ERSQ +NK A N+LRA+L E EL ++ + + WG QIRSYVL + Sbjct: 241 TCQNERSQLQNKETAMNVLRARLLERELARQVAERAKLKGEHRDAAWGNQIRSYVLDD-R 299 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 VKD RTN+E ++ VLDG++D F+ A L + Sbjct: 300 RVKDHRTNVETSNTQAVLDGEIDLFIDAFLRWR 332 >gi|238796545|ref|ZP_04640052.1| Peptide chain release factor 2 [Yersinia mollaretii ATCC 43969] gi|238719523|gb|EEQ11332.1| Peptide chain release factor 2 [Yersinia mollaretii ATCC 43969] Length = 303 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 167/301 (55%), Positives = 213/301 (70%), Gaps = 1/301 (0%) Query: 53 DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112 + ++ I ++ + D LLELA+E DD E L + ++ +F + SGE Sbjct: 2 EEIVTTIDQLDQGMEDVTGLLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGEY 61 Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DS + YL++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E DG+ AG+KSAT+ I Sbjct: 62 DSANCYLDLQAGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESDGDVAGLKSATIKI 121 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G A+GWL+ E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID Sbjct: 122 IGEYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDV 181 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ Sbjct: 182 YRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKK 241 Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + E +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 242 NADKQVLEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLK 300 Query: 353 I 353 Sbjct: 301 A 301 >gi|222637229|gb|EEE67361.1| hypothetical protein OsJ_24645 [Oryza sativa Japonica Group] Length = 498 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 130/358 (36%), Positives = 214/358 (59%), Gaps = 4/358 (1%) Query: 1 MKLS-RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59 ++L+ +++ + D + ++ L K+ D LW + +A+ ++ + + + + Sbjct: 130 VELAVARVSEVRQSAGLDQLEEEIASLEKKSADSSLWDDPSKAQEILVALTEVKDRVKLL 189 Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSGEADSNDA 117 +++ ++ + +++L E D + ++ + LLSG D A Sbjct: 190 NDLKLQVEEAETIVKLTEELDSIDTGLLEEASKIIKALNKALDNFEMTQLLSGPYDKEGA 249 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 + + AGAGGT++QDWA+MLLRMY RW EK+++KT +E GEEAGIKSAT+ ++G A Sbjct: 250 VINITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSATIELEGRYA 309 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRAS 236 YG+L GE+G HR+VR SP+++ R TSF+ + V P+ ++S+++EI E D I RA Sbjct: 310 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESMDVEIPEEDLEISFTRAG 369 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQ+VN ++AVR+ HIPTG+ V+C +ERSQ NK +A + L+AKL + ++R Sbjct: 370 GKGGQNVNKVETAVRMVHIPTGIAVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEI 429 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG+QIR+YV PY++VKD+RT E + + V+DG+LD F++A L K Sbjct: 430 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTACETSDITGVMDGELDTFIRAYLKYK 487 >gi|89898648|ref|YP_515758.1| peptide chain release factor 2 [Chlamydophila felis Fe/C-56] gi|89332020|dbj|BAE81613.1| hypothetical protein [Chlamydophila felis Fe/C-56] Length = 315 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 146/308 (47%), Positives = 199/308 (64%), Gaps = 1/308 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 L +S + + ++ + L + D ++ + + + + Sbjct: 2 SERIASLKRQVSDYQNFKSKVDNLTFFLNDSEASSDPEFREDLEKEFSICENILSEWEIQ 61 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LLSGE D N +L ++AGAGGTES DW ML RMY RWA + ++K E ++ DG+ AGI Sbjct: 62 RLLSGEVDKNSCFLTINAGAGGTESCDWVEMLFRMYCRWASEHRWKVEVIDRQDGDVAGI 121 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K T+ G AYG+ K E+GVHRLVRISP++SN++RHTSF+S+ VYP +DD IEI+I Sbjct: 122 KHVTVKFSGDYAYGYAKAERGVHRLVRISPFNSNAKRHTSFASVDVYPEIDDEIEIDIQP 181 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDT+R+SGAGGQHVN TDSAVRITHIPTG+ V CQ ERSQ +N+ MLRA++Y Sbjct: 182 NDLRIDTFRSSGAGGQHVNVTDSAVRITHIPTGITVSCQNERSQLQNRESCMKMLRARMY 241 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LD 344 + LQ+R E + +K EI WG QIR+YV QPY +VKD+RT E + ++DG+ LD Sbjct: 242 QQILQERLEKQLLERKNKKEIAWGSQIRNYVFQPYTLVKDVRTGYETGNVQAMMDGELLD 301 Query: 345 DFMKATLA 352 DF+KA LA Sbjct: 302 DFVKAYLA 309 >gi|217969845|ref|YP_002355079.1| peptide chain release factor 1 [Thauera sp. MZ1T] gi|217507172|gb|ACK54183.1| peptide chain release factor 1 [Thauera sp. MZ1T] Length = 360 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 117/339 (34%), Positives = 182/339 (53%), Gaps = 7/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ RL L+ +++ + L RER ++ ++ +E + D EL Sbjct: 9 LEHLANRLEELDRTLASEEGARDMNAFRELSRERAEIEPVVALYREHRLAEADCATAREL 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + + RI+ Q L D+ + +LE+ AG GG E+ +A Sbjct: 69 LADPEMRELGELELAEGEARIEALEAELQRALLPRDPNDARNLFLEIRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE++++K E + + + G K + G AY LK E G HR+ R+ Sbjct: 129 GDLLRMYTRYAERQRWKVEIVSASESDLGGYKEVIARVVGNGAYSKLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ ++I+ +D RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 189 VTETQGRIHTSACTVAVLPEADEVEAVDINPADLRIDTFRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV+CQ +RSQH+NKAQA +L A+LY+ + R + + K+ +G G + Sbjct: 249 IPTGIVVECQDDRSQHRNKAQAMAVLAARLYDARV--RAQQSAEAAQRKSLVGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P V D R N+ V+ G+LD+ + A Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKLDAVMQGELDEIVDAL 344 >gi|149280703|ref|ZP_01886814.1| peptide chain release factor 1 [Pedobacter sp. BAL39] gi|149228568|gb|EDM33976.1| peptide chain release factor 1 [Pedobacter sp. BAL39] Length = 380 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 104/348 (29%), Positives = 178/348 (51%), Gaps = 12/348 (3%) Query: 11 GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 + + + R + + +P Q++ L +E + L + K ++ + + Sbjct: 22 KDMLEKLEAIKLRWEDVEEQLSNPDTMQDMKRFAALNKEYKDLGKIVDEYKIYKNVMSNI 81 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGA 125 E+ E D + + + L + + E + + D+ +A E+ G Sbjct: 82 EANKEILSNEKDAELREMAKEELDLLLKQQEEMEEKVRLMLIPVDPEDAKNAVFEIRGGT 141 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A L RMY+R+ E++ +K E +++ +G G K L + G + YG LK E Sbjct: 142 GGDEAALFAGDLYRMYSRFFEQKGWKVETVDVTEGTAGGYKEVILKVSGEDVYGQLKYES 201 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ ++ R HTS +S+ V P + I++ I+ +D + T R+ GAGGQ+VN Sbjct: 202 GVHRVQRVPDTETQGRVHTSAASVAVLP-EAEEIDLYINPADIDLQTSRSGGAGGQNVNK 260 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 ++ V++TH P+G+VV CQQERSQ N+ A MLR+KLY++ELQK+ +I KT Sbjct: 261 VETKVQLTHRPSGIVVVCQQERSQLGNRVIAMEMLRSKLYDIELQKKN--GDIAARRKTM 318 Query: 306 IGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 + G + IR+Y P V D R + + S V+DG + + + A Sbjct: 319 VSTGDRSAKIRTYNY-PQGRVTDHRIGLTLYNLSGVMDGGVQELIDAL 365 >gi|212703639|ref|ZP_03311767.1| hypothetical protein DESPIG_01684 [Desulfovibrio piger ATCC 29098] gi|212672934|gb|EEB33417.1| hypothetical protein DESPIG_01684 [Desulfovibrio piger ATCC 29098] Length = 356 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 108/350 (30%), Positives = 172/350 (49%), Gaps = 11/350 (3%) Query: 13 LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68 +F + ++ L P ++ + + + L + L + + + + L + Sbjct: 1 MFAKLEGLEKKYMELEQALAQPDVYNDQDQYRKLTKAHADLRDVVELFRRHRSLTQELEE 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 N LL + + +E + + + L D + LE+ AG GG Sbjct: 61 NKQLLHDSDPDIKAMAQEEIAAAEAELPELEHKIKVLLLPKDPLDEKNTILEIRAGTGGE 120 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMYTR+AE + +K E + + G K LI G Y LK E G H Sbjct: 121 EAALFAADLFRMYTRYAEIKGWKVEIMSESPSDSGGYKEIICLISGDRVYSHLKFEAGTH 180 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ ++ R HTS +++ V P + +++EI D RID YRASGAGGQHVN T+S Sbjct: 181 RVQRVPATETQGRIHTSAATVAVMP-EAEEVDVEIRPEDLRIDIYRASGAGGQHVNKTES 239 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITHIPTG VV CQ ERSQHKNKA+A +L +++ E +++ + K ++G Sbjct: 240 AVRITHIPTGTVVTCQDERSQHKNKARAMKVLASRILAAERERQNSE--LSADRKAQVGS 297 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P D R N+ S +++G+++ +A + Sbjct: 298 GDRSERIRTYNF-PQGRCTDHRINLTLYSLDRIMEGEVEPLFEALATAAQ 346 >gi|325847800|ref|ZP_08170022.1| peptide chain release factor 1 [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480818|gb|EGC83871.1| peptide chain release factor 1 [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 357 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 120/348 (34%), Positives = 189/348 (54%), Gaps = 11/348 (3%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + ++ + L K DP + + + K + RE L + EI+ E Sbjct: 4 NLEHMRENFKELEKKLADPEVLSDTDKFKKVSREYNQLKPIVEKYNEIRAAEDMIEENTE 63 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTES 130 L E +D ++ + K +E + + D D +E+ AGAGG E+ Sbjct: 64 LLKEAEDKEMIDLLKAEIDENKKNLEKYNEDLKILLIPQDPNDHKDVIVEIRAGAGGEEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY +A+K+ +KTE +++ G+K AT +++G AY LK E GVHR+ Sbjct: 124 GLFAGNLYRMYHMYADKQNYKTEDIDVSSQGIGGMKEATFIVRGEGAYSKLKYESGVHRV 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P D ++I+I +D R D YR+SG GGQ VNTTDSAV Sbjct: 184 QRVPETESGGRIHTSTATVAVLP-EADEVDIKIDPNDIRTDVYRSSGNGGQSVNTTDSAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+THIPTG+VV CQ E+SQ KNK +A +LRA+LYE+E +KR++ I ++ K+++G G Sbjct: 243 RLTHIPTGLVVTCQDEKSQIKNKDKAMRVLRARLYEMEEEKRQKE--ISDNRKSQVGTGD 300 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N D LDG++++ + + + + Sbjct: 301 RSERIRTYNY-PQGRITDHRINKTIYQLDDFLDGNIEEMIDSLITEDQ 347 >gi|227529623|ref|ZP_03959672.1| peptide chain release factor 1 [Lactobacillus vaginalis ATCC 49540] gi|227350413|gb|EEJ40704.1| peptide chain release factor 1 [Lactobacillus vaginalis ATCC 49540] Length = 362 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 106/355 (29%), Positives = 174/355 (49%), Gaps = 12/355 (3%) Query: 9 CLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---D 64 + +FD R LN DP + + L +E L + E + Sbjct: 2 EMAEIFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKKVTQ 61 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHA 123 + D+ LL + + D + ++ + + + + + + D + +E+ Sbjct: 62 TISDDEELLRESDDPDLTELTKDELSSAKDQQAKLEKELEILLIPKDPNDDKNIIMEIRG 121 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 AGG E+ +A L MY +AE + +K E ++ + E G K L+I G Y LK Sbjct: 122 AAGGDEASLFAADLYNMYLHYAENQGWKVEVVDKSETEVGGFKEIALMITGDKVYSKLKF 181 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G HR+ R+ +S R HTS +++ V P + ++++I D R+D YR+SGAGGQHV Sbjct: 182 ENGAHRVQRVPVTESAGRVHTSTATVGVMP-EAEDVDVDIDPKDIRVDVYRSSGAGGQHV 240 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SAVR+TH+PTG+VV Q ERSQ +N+A+A +L++++Y+ QK E + K Sbjct: 241 NKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYYQQK--EQSAYDAKRK 298 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IG G +IR+Y P V D R + ++ GDLD+ ++A + + Sbjct: 299 DAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMSGDLDEIIEALIVADQ 352 >gi|52082235|ref|YP_081026.1| peptide chain release factor 1 [Bacillus licheniformis ATCC 14580] gi|52787627|ref|YP_093456.1| peptide chain release factor 1 [Bacillus licheniformis ATCC 14580] gi|319648109|ref|ZP_08002326.1| peptide chain release factor 1 [Bacillus sp. BT1B_CT2] gi|81608865|sp|Q65DV1|RF1_BACLD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|52005446|gb|AAU25388.1| peptide chain release factor 1 [Bacillus licheniformis ATCC 14580] gi|52350129|gb|AAU42763.1| PrfA [Bacillus licheniformis ATCC 14580] gi|317389744|gb|EFV70554.1| peptide chain release factor 1 [Bacillus sp. BT1B_CT2] Length = 356 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 112/351 (31%), Positives = 181/351 (51%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68 + D + R LN DP + + + + +E+ L + + + +L D Sbjct: 1 MLDRLKSIEDRYEKLNELLSDPEVVNDPKKLREYSKEQSDLQETVEVYRRYRSASEQLSD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127 +LE L+ D +++E LQ + + + + D + +E+ AGG Sbjct: 61 AKAMLEEKLDSDMREMVKEEISELQEEIESLTDQLKVLLIPKDPNDDKNVIMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE + +KTE +E + G K +I G AY LK E G Sbjct: 121 EEAALFAGNLYRMYSRYAELQGWKTEVMEANMTGTGGYKEIIFMINGNGAYSRLKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ P + +E++I E D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLP-EAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ ++E A ++ K+ +G Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKF--QQEAQAEYDQNRKSAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L+G LD+ + A + + Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVIDALIVEDQ 347 >gi|238026092|ref|YP_002910323.1| peptide chain release factor 1 [Burkholderia glumae BGR1] gi|237875286|gb|ACR27619.1| Peptide chain release factor 1 [Burkholderia glumae BGR1] Length = 360 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 115/344 (33%), Positives = 178/344 (51%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D RL+ LN ++ ++ + + L RE + + + + D EL Sbjct: 9 LDQLSSRLAELNELLSRENVTADLDQYRKLTREHAEIGPVVEQYAQWRLARGDEAAAQEL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + +E + Q L D + ++E+ AG GG ES +A Sbjct: 69 LADASMREFAEEEIREARERMARLEAELQTMLLPKDPNDDRNIFVEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE+++++ E + + G K + I G AY LK E G HR+ R+ Sbjct: 129 GDLLRMYLRYAERQRWQVEMMSESGSDLGGYKEVIVRIAGHGAYSRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIAEVEINPADLRIDTFRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G + Sbjct: 249 LPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAREAATRKSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++DGDLD+ + + + + Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELIASLASEHQ 349 >gi|212640540|ref|YP_002317060.1| peptide chain release factor 1 [Anoxybacillus flavithermus WK1] gi|212562020|gb|ACJ35075.1| Protein chain release factor A [Anoxybacillus flavithermus WK1] Length = 361 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 110/354 (31%), Positives = 175/354 (49%), Gaps = 12/354 (3%) Query: 10 LGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 + +FD + R LN DP + + + + +E+ L + +E + Sbjct: 1 MRKMFDRLEAVEARYEKLNELLMDPEVLNDPKKLRDYSKEQSDLAETVQTYREYKSVREQ 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAG 124 + E+ D + + + ++ E + L D + +E+ Sbjct: 61 LADAKAMLEEKLDPDMRDMVKEEISELEEREEQLVEKLKVLLLPKDPNDDKNVIMEIRGA 120 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG E+ +A L RMYTR+AE + +KTE +E H G K +I+G AY LK E Sbjct: 121 AGGEEAALFAGDLYRMYTRYAESQGWKTEVIEAHPTGLGGYKEIIFMIQGKGAYSKLKFE 180 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G HR+ R+ +S R HTS +++ P +++ +E D R+DT+ +SG GGQ VN Sbjct: 181 NGAHRVQRVPETESGGRIHTSTATVACLPEMEEIEIEI-NEKDIRVDTFASSGPGGQSVN 239 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TT SAVR+THIPTG+VV CQ E+SQ KNK +A +LRA++Y+ ++E A ++ K Sbjct: 240 TTMSAVRLTHIPTGIVVSCQDEKSQIKNKEKAMKVLRARIYDKY--QQEARAEYDQTRKQ 297 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +G G +IR+Y P V D R + VL+G LD+ + A + + Sbjct: 298 AVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQVLEGKLDEIIDALILDDQ 350 >gi|84393962|ref|ZP_00992702.1| peptide chain release factor 2 [Vibrio splendidus 12B01] gi|84375406|gb|EAP92313.1| peptide chain release factor 2 [Vibrio splendidus 12B01] Length = 303 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 161/300 (53%), Positives = 217/300 (72%), Gaps = 1/300 (0%) Query: 53 DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112 + + I ++ + D LLELA+EE+D E L ++ ++E +F + +G+ Sbjct: 2 EAVVETIDQLDQGVEDVEGLLELAVEEEDQETFDEIEPELAELEAKLEKLEFRRMFAGDH 61 Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D++D Y+++ +G+GGTE+QDW +M+LRMY RWA+ + FKTE +E+ DG+ AG+K AT+ I Sbjct: 62 DASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWADSKGFKTEVIEVSDGDVAGLKGATVRI 121 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I I+I+ SD RID Sbjct: 122 SGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNITIDINPSDLRIDV 181 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK QA LRAKL+ELE+QK+ Sbjct: 182 YRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELEIQKQ 241 Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E +K++IGWG QIRSYVL +KDLRT IE + VLDGDLD F++A+L Sbjct: 242 NAEKQASEETKSDIGWGSQIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDKFIEASLK 300 >gi|332993699|gb|AEF03754.1| peptide chain release factor 1 [Alteromonas sp. SN2] Length = 361 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 119/339 (35%), Positives = 181/339 (53%), Gaps = 9/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +N V+R + DP + N + + L +E L++ + Q + E+ Sbjct: 9 LENLVERFEEVQALLGDPQVIGNQDKFRNLSKEFSQLESVVGGFNAYQQAQENLDSANEM 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + I+ Q L D ++ +LEV AGAGG E+ Sbjct: 69 LKEDDAEMREMAQEELKIAKADIERLETELQVLLLPKDPNDDSNCFLEVRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE + ++ E + ++GE G K I G YG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAETKGWRVELINANEGEHGGYKEVVANISGDGVYGILKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P + +S I+I+ +D RIDT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPDTESQGRIHTSACTVAVLPEIPESEAIDINPADLRIDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+P+G+VV+CQ ERSQHKN+A+A ++L+A+L +E + A + K+ +G G Sbjct: 249 THLPSGLVVECQDERSQHKNRAKAMSVLQARLNNIEE--EKRAAEEASTRKSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +IR+Y P V D R N+ +V++GDL + Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTIYRLDEVIEGDLKQLLD 344 >gi|282859886|ref|ZP_06268974.1| peptide chain release factor 2-like protein [Prevotella bivia JCVIHMP010] gi|282587289|gb|EFB92506.1| peptide chain release factor 2-like protein [Prevotella bivia JCVIHMP010] Length = 374 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 118/359 (32%), Positives = 206/359 (57%), Gaps = 12/359 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + + L + +T+ P W++ A+ M++ + ++ + + Sbjct: 10 ILSRTDALYHYLGIEQKRIEFEEEQLRTQAPDFWEDPDRAREQMKKVKEIERWVKGYDKA 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + + + D+ +E ++ +E + +++L + D + ++++ Sbjct: 70 RAQAEELQLAFDFYK--DELVTEEEVDAIYNKVVATIEDLELKNMLRQQEDPMECVMKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PNAYGWL 181 +GAGGTESQDWA+ML+RMY RW E +K +I G+EAGIKS T+ +G A+G+L Sbjct: 128 SGAGGTESQDWADMLMRMYMRWGEAHGYKVTISDIQVGDEAGIKSVTMKFEGGEYAFGYL 187 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVR+SP+++ +R TSF+S++V P+VDD+IE+ + + DT+R+SGAGGQ Sbjct: 188 KSENGVHRLVRVSPFNAQGKRMTSFASVFVTPLVDDTIEVYVDPARVSWDTFRSSGAGGQ 247 Query: 242 HVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 +VN +S VR+ + ++++ + R Q KN+A+A +L+++LY+ ++KR Sbjct: 248 NVNKVESGVRLRYQYEDPDTGEQEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRM 307 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E E++K +I WG QIRSYV + VKD RTN + + V++G LD F+KA L Sbjct: 308 EAQAKVEAAKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDSVMNGKLDGFIKAYLM 365 >gi|160947003|ref|ZP_02094206.1| hypothetical protein PEPMIC_00965 [Parvimonas micra ATCC 33270] gi|158447387|gb|EDP24382.1| hypothetical protein PEPMIC_00965 [Parvimonas micra ATCC 33270] Length = 365 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 125/351 (35%), Positives = 200/351 (56%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCD 68 LFD + V++ L K DP + +++ + L +E + + +E + L + Sbjct: 10 LFDKLELLVEKFEELEKKIIDPEIMKDMNVWQKLAKEHGDMKPIVEKYREYSKHKKELEE 69 Query: 69 NLILLELALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 N +L+ +L+++ +++E I+ E + + L D + ++EV AG GG Sbjct: 70 NKEMLKESLDDEMKELVKEEISELEDSIEKEEQDLKILLLPKDPNDEKNVFMEVRAGTGG 129 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A LLRMY +A+K+K+KTE + I + GIK L+KG AY LK E GV Sbjct: 130 DEAGLFAEDLLRMYRMFADKQKWKTEIMSISEQGVGGIKEVVFLVKGHGAYSKLKYESGV 189 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S+ R HTS +++ V P + +++ I+++D RID YRASG GGQ VNTTD Sbjct: 190 HRVQRVPATESSGRIHTSAATVAVLP-EVEDVDVVINQNDLRIDVYRASGNGGQCVNTTD 248 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTGVVV CQ E+SQ KNK +A +L+++LYE +++ +I ++ K++IG Sbjct: 249 SAVRITHIPTGVVVTCQDEKSQLKNKEKAMKILKSRLYEKYQEEQN--KDIADARKSQIG 306 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R N+ L+GD+ + + A + + Sbjct: 307 SGDRSERIRTYNF-PQGRVTDHRINMTIYQLDSFLNGDISEMIDALITSDQ 356 >gi|254180490|ref|ZP_04887088.1| peptide chain release factor 1 [Burkholderia pseudomallei 1655] gi|184211029|gb|EDU08072.1| peptide chain release factor 1 [Burkholderia pseudomallei 1655] Length = 360 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 114/346 (32%), Positives = 176/346 (50%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72 D RL+ LN ++ ++ + + L RE + + + + D L Sbjct: 9 LDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQEL 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L A D + + D + ++E+ AG GG ES Sbjct: 69 LADASMRDFAEDELRGARDRMGRLAAELQTMLL--PKDPNDERNIFVEIRAGTGGDESAL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A LLRMY R+AE+++++ E + + G K + I G AY LK E G HR+ R Sbjct: 127 FAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+ Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THI TG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G Sbjct: 247 THISTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ ++DGDLD+ + A ++ + Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVSEHQ 349 >gi|296137058|ref|YP_003644300.1| peptide chain release factor 1 [Thiomonas intermedia K12] gi|295797180|gb|ADG31970.1| peptide chain release factor 1 [Thiomonas intermedia K12] Length = 358 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 121/344 (35%), Positives = 184/344 (53%), Gaps = 8/344 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 L D + +R L+ P ++ + + RE L + + + + D Sbjct: 4 SLLDKLEQMQRRADELDALLAAPDCTADLQRFRNMTRELAELQAVVGLYVQYKAKTEDLS 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L + D + Q+ + + Q L DS + ++E+ AG GG E Sbjct: 64 QAESLLSDPDMKELAQQEIQDARAALDALEAQLQVALLPRDPDDSRNVFVEIRAGTGGEE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 S +A LLRMY R+AE++++ TE + + G K L + G AYG LK E G HR Sbjct: 124 SALFAADLLRMYARYAERKRWATEVISESPSDLGGYKEVILRVAGEGAYGLLKYESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ ++ R HTS +++ V P +D++ I+I+ SD RIDT+RASGAGGQH+N TDSA Sbjct: 184 VQRVPKTETQGRIHTSAATVAVMPEMDEAQAIQINPSDLRIDTFRASGAGGQHINKTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 +RITH+PTG+VV+CQ ERSQH+NKA+A ++L A+L E E Q R+ + K+ +G G Sbjct: 244 IRITHLPTGLVVECQDERSQHRNKARALSVLAARLAERERQSRQAE--EAATRKSLVGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V + R N+ +LDGDLD+ + A Sbjct: 302 DRSDRIRTYNF-PQGRVSEHRINLTLYKIDAILDGDLDELLTAL 344 >gi|238763000|ref|ZP_04623967.1| Peptide chain release factor 1 [Yersinia kristensenii ATCC 33638] gi|238698758|gb|EEP91508.1| Peptide chain release factor 1 [Yersinia kristensenii ATCC 33638] Length = 360 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 115/337 (34%), Positives = 175/337 (51%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D ++ + + L RE L + KE + D + Sbjct: 9 LEALQERHEEVLAHLGDANVIADQDRFRALSREYAQLTDVTRCFKEWRSVQDDIEAAEMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ R + + Q L D D +LE+ AG GG E+ +A Sbjct: 69 LEDPEMREMAQDELKEAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 + RMY+R+AE R++K E + +GE G K + G +G LK E G HR+ R+ Sbjct: 129 GDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGDGVFGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ EI+ D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR+ + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQ--LAEASERRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ +V++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQ 342 >gi|288923233|ref|ZP_06417373.1| peptide chain release factor 2 [Frankia sp. EUN1f] gi|288345407|gb|EFC79796.1| peptide chain release factor 2 [Frankia sp. EUN1f] Length = 366 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 142/337 (42%), Positives = 202/337 (59%), Gaps = 4/337 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D + +R L + DP LW + A+ + R + I+ + + Sbjct: 12 LDATLAGIETVLDIEGLRRRAQELEQEAADPDLWSDQARAQAVTRRLSGVKGDIARVDGL 71 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D + L+L E+ + + + ++ + +LLSGE D DA +++ Sbjct: 72 RRRLDDLIAALDLGDEDLLAEMAVDLPSLTR----DISALEVRTLLSGEYDERDAIVQLS 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ DW MLLRMY RWAE+ + TE + + EEAG+KSAT ++ P AYG L+ Sbjct: 128 AGAGGVDAADWTAMLLRMYLRWAERHGYATEVFDTSEAEEAGLKSATFQVRCPYAYGTLR 187 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+ +RR TSF+ + V P V+ S ++I E + RID +R+SG GGQ Sbjct: 188 SEHGVHRLVRISPFDNQNRRQTSFAGVEVTPAVEVSDHVDIDEKELRIDIFRSSGPGGQG 247 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A +L+AKL E + Sbjct: 248 VNTTDSAVRITHLPTGIVVTCQNERSQLQNKAAAMMVLQAKLLERRRAEEAAEKQRLTGG 307 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 ++ +G QIR+YVL PYQMVKDLRT +E ++ VL Sbjct: 308 PQDVSFGSQIRNYVLHPYQMVKDLRTEVETSNTGAVL 344 >gi|121997785|ref|YP_001002572.1| peptide chain release factor 1 [Halorhodospira halophila SL1] gi|166223563|sp|A1WVQ8|RF1_HALHL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|121589190|gb|ABM61770.1| bacterial peptide chain release factor 1 (bRF-1) [Halorhodospira halophila SL1] Length = 363 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 114/341 (33%), Positives = 183/341 (53%), Gaps = 9/341 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72 + +R + + DP + + + L RE L+ + + + D + + Sbjct: 9 LERMAERHEEIGAQLADPDVVGDPSKFAELSREYARLEPVVQDLNAYRAEADTVASAEAM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L E QE ++ +R++ Q + + D + +LEV AGAGG E+ Sbjct: 69 LNDGDAEIRALAEQELAEAQRRLEELEGALQRHLVPTDPNDQRNIFLEVRAGAGGDEAAL 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A LLRMY R+AE++ +KTE L +GE G + + G + Y LK E G HR+ R Sbjct: 129 FAGDLLRMYMRYAERQGWKTEILSAREGEHGGYREVIARVSGRSVYARLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ + P +D+ IE++ +D R+DT+R+SGAGGQHVNTTDSA+RI Sbjct: 189 VPATESQGRIHTSACTVAILPELDEVSAIEVNTADLRVDTFRSSGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+P+G+VV+CQ ERSQ+KN+A+A +L+A+L E E K++ E + +G G Sbjct: 249 THLPSGLVVECQDERSQNKNRAKAIALLQARLTEQERAKQQSER--SEQRRLAVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R + V++G +D+ + Sbjct: 307 ERIRTYNF-PQGRVTDHRIGLTLYKLEQVMEGGMDELLDGL 346 >gi|260584605|ref|ZP_05852351.1| peptide chain release factor 1 [Granulicatella elegans ATCC 700633] gi|260157628|gb|EEW92698.1| peptide chain release factor 1 [Granulicatella elegans ATCC 700633] Length = 359 Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats. Identities = 107/347 (30%), Positives = 169/347 (48%), Gaps = 12/347 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D+ + R L+ DP + + L +E +L + K Q + + Sbjct: 1 MFDQLDSFIIRYDELSELLSDPDVISDTKRFMELTKEESNLRPKVETFKRYQQVVEEIGD 60 Query: 72 LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 E+ E D + + + + E +F L D + +E+ AGG Sbjct: 61 TEEMLGEGLDSEMAEMAKEELASLKKEKVELEEKIKFLLLPEDPNDGKNIIMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A LL MY ++AE + ++ E ++ + G K L+I G N + LK E G Sbjct: 121 DEAALFAGDLLSMYQKYAESQGWRVEVMDANVTGIGGYKEVILMITGDNVFSKLKYESGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P ++ + D R+D Y ASGAGGQHVN T Sbjct: 181 HRVQRVPSTESQGRVHTSTATVVVMPEAEEVEIEL-EDKDIRVDIYHASGAGGQHVNKTA 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+VV Q ERSQ KN+ +A +LRA++Y+ Q E + + K+ +G Sbjct: 240 SAVRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYDKISQ--EAQSEYDANRKSAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G +IR+Y P V D R + VL G +D+ + A + Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDQVLAGKIDEIVDALI 343 >gi|150388171|ref|YP_001318220.1| peptide chain release factor 1 [Alkaliphilus metalliredigens QYMF] gi|166977357|sp|A6TK43|RF1_ALKMQ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|149948033|gb|ABR46561.1| peptide chain release factor 1 [Alkaliphilus metalliredigens QYMF] Length = 357 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 103/352 (29%), Positives = 185/352 (52%), Gaps = 12/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68 + D ++ L K DP + + ++ + L++E ++ + +E + L + Sbjct: 1 MLDKLAFLQEKYEDLGEKISDPEIINDQVQWQKLIKEHSEIEPIVMKYREYKTTQQALGE 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAG 126 ++ + + + + + +Q + + + D + +E+ GAG Sbjct: 61 TKEIMHDKATDAELKEMAKMEVEELEESIVEMEEQLKVMLLPTDPNDDKNVIVEIRGGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A +L RMYTR+AE+ +K E + +++ G K +IKG AY LK E G Sbjct: 121 GDEAGLFAAVLFRMYTRYAERSGWKVEMMSLNESGVGGYKEVIFMIKGKGAYSQLKYESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ RI +S R HTS +++ + P +D E+ I ++ RID +R+SG GGQ VNTT Sbjct: 181 AHRVQRIPTTESGGRIHTSTATVVIMPEAEDVGEVNIDTNELRIDVFRSSGNGGQSVNTT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PTG+VV CQ +SQ KNK +A +L+++L + +Q+++ I + ++++ Sbjct: 241 DSAVRITHLPTGLVVSCQDGKSQLKNKEKAMKVLKSRLLDQMIQEQDAE--ISQDRRSKV 298 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R N+ LDG++++ + + + + Sbjct: 299 GTGDRSERIRTYNF-PQGRVTDHRINVTVYKLDAFLDGEINEMIDSLITSAQ 349 >gi|319942226|ref|ZP_08016542.1| peptide chain release factor 1 [Sutterella wadsworthensis 3_1_45B] gi|319804279|gb|EFW01171.1| peptide chain release factor 1 [Sutterella wadsworthensis 3_1_45B] Length = 358 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 115/344 (33%), Positives = 176/344 (51%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +RL ++ P ++ + L RER ++ + + + D EL Sbjct: 10 LSALSRRLEEIDRMLAAPETAADMNLFRDLSRERGEIEPIVGRLHAYERAESDLAAAQEL 69 Query: 76 ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 A + + + E S + + + L D + +LE+ AG GG ES +A Sbjct: 70 AADPEMKAFAAEESAAATHELERIEQELRIALLPKDPNDDRNIFLEIRAGTGGDESALFA 129 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE ++TE + ++ E G K + I G AY LK E G HR+ R+ Sbjct: 130 GDLLRMYLRYAEGHGWQTEIVSKNESELGGYKEVIVRIIGRGAYSKLKFESGGHRVQRVP 189 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P +D+ E++++ +D RID +RASGAGGQH+ TDSAVRITH Sbjct: 190 ATESQGRIHTSACTVAVLPELDEIEEVKLNPADLRIDVFRASGAGGQHIQKTDSAVRITH 249 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQ +NKA+A +L ++LY Q E+ K IG G + Sbjct: 250 LPTGMVVECQDERSQTQNKARAMAVLASRLY--AQQVAEQHEREASERKNLIGSGDRSER 307 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ +++GDL++ + A + Sbjct: 308 IRTYNY-PQGRVTDHRINLTLYRLEAIMNGDLEEIITALTTEHQ 350 >gi|307544472|ref|YP_003896951.1| peptide chain release factor 1 [Halomonas elongata DSM 2581] gi|307216496|emb|CBV41766.1| peptide chain release factor 1 [Halomonas elongata DSM 2581] Length = 363 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 118/343 (34%), Positives = 182/343 (53%), Gaps = 10/343 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +R L DP + + + RE LD+ ++ ++ + D L Sbjct: 9 LDTFAERFEELAALLADPEVIADQPRFRDYSREYAELDDLVAAWRDYRAVEEDIEAAESL 68 Query: 76 ALEED-DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN--DAYLEVHAGAGGTESQD 132 A + D + L R KLE + + LL + + +LE+ AG GG E+ Sbjct: 69 ADDADAEMRELASMERESGREKLEALETRLKQLLVPRDPDDAGNVFLEIRAGTGGDEAAL 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE +K E + G++ G K +KG Y LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAELHGWKVEIVSASHGDQGGYKELISRVKGEGVYARLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P + EI+I ++ R+DT+RASGAGGQHVNTTDSA+RI Sbjct: 189 VPATESQGRIHTSACTVAVMPEAAEVGEIDIDPNELRVDTFRASGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+P+GVVV+CQ+ERSQHKN+A+A ++L A+L + + + + ++ +G G Sbjct: 249 THLPSGVVVECQEERSQHKNRAKAMSLLAARLKQAAQDSQRQ--QQADERRSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351 +IR+Y P V D R N+ SDV+ G+ LD+ ++ + Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYKLSDVVGGEGLDEVIEPLI 348 >gi|163750755|ref|ZP_02157990.1| peptide chain release factor 1 [Shewanella benthica KT99] gi|161329450|gb|EDQ00444.1| peptide chain release factor 1 [Shewanella benthica KT99] Length = 361 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 113/338 (33%), Positives = 185/338 (54%), Gaps = 9/338 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R + DP + + + L +E L++ ++ K Q D E+ Sbjct: 9 LEGLLERNEEVLALLSDPGIIADQTRFRALSKEYSQLEDVVAAFKGFQQATEDLDAAKEM 68 Query: 76 ALEEDDCSILQETSDNLQR---IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E D + + IK + Q L D N+A++E+ AGAGG E+ Sbjct: 69 LSENDPEIKQMAQEEMKEAKSLIKKLEDELQILLLPKDPNDDNNAFVEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+ E +++TE + ++GE G K + + G YG LK E G HR+ R Sbjct: 129 FAGDLYRMYSRYFESNRWQTEIMNANEGEHGGFKEIIIKVSGEGVYGRLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V V ++ I+I+ +D ++DT+RASGAGGQHVN TDSA+R+ Sbjct: 189 VPETESQGRVHTSACTVAVLVEVPEAEAIKINPADLKVDTFRASGAGGQHVNKTDSAIRL 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIP+G+VV+CQ +RSQHKN+AQA ++L A++ +E +KR + + + +G G Sbjct: 249 THIPSGIVVECQDQRSQHKNRAQAMSVLTARIQAVEDEKRRSVEET--TRRNLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +IR+Y P V D R N+ +++++G+LD + Sbjct: 307 ERIRTYNY-PQGRVSDHRINLTLYRLNEIMEGELDVLI 343 >gi|238019080|ref|ZP_04599506.1| hypothetical protein VEIDISOL_00942 [Veillonella dispar ATCC 17748] gi|237864335|gb|EEP65625.1| hypothetical protein VEIDISOL_00942 [Veillonella dispar ATCC 17748] Length = 360 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 110/348 (31%), Positives = 182/348 (52%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + L + DP + E + L R+ L + + + L +E+ Sbjct: 6 LQVIEDKFMDLEQRISDPEVIARQDEWRKLTRQHAQLSETVETFRTYKKVLAGIDEAMEV 65 Query: 76 ALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 ++ +E + + + E Q L D + +E+ GAGG E+ Sbjct: 66 IEDKSMDEEFREMAQEELKELKPQKEELEEKLQILLLPKDPNDDKNIIIEIRGGAGGDEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMYT++AE + ++ E ++ ++ E G K + G N Y +K E GVHR+ Sbjct: 126 ALFAGDLFRMYTKYAESQGWRCEIIDANEPELGGFKEVIFSVDGENVYSKMKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS ++ V P + ++IE++E D +IDTYRASGAGGQH+N T+SAV Sbjct: 186 QRVPATETQGRVHTSTVTVAVLP-EMEDVDIEVNEKDLKIDTYRASGAGGQHINKTESAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+P+G+VV CQ +RSQ +N+ +A +LRAKL + ++E I+++ K+++G G Sbjct: 245 RITHLPSGIVVACQDQRSQLQNREKAMRVLRAKLQD--QAEQEAISSMAADRKSQVGTGD 302 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +L+GDLD+ ++A A + Sbjct: 303 RSERIRTYNY-PQGRVTDHRINLTLYKLDAILNGDLDEIIQALNAADQ 349 >gi|255074407|ref|XP_002500878.1| predicted protein [Micromonas sp. RCC299] gi|226516141|gb|ACO62136.1| predicted protein [Micromonas sp. RCC299] Length = 428 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 134/372 (36%), Positives = 204/372 (54%), Gaps = 19/372 (5%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + D + ++ L+ + LW + I+AK +M E ++ + Sbjct: 43 LETRVKDALDVVDVERLAATVADLDAAASEGTLWDDPIKAKAVMAELADAKEQLATARGF 102 Query: 63 QDRLCDNLILLELALEE-----------------DDCSILQETSDNLQRIKLEVEYKQFE 105 ++ L D + LE+ E D +IL E SD ++ +++ + Sbjct: 103 ENLLGDAAVALEMIDAEREDDSLSGAAANDASAGPDPTILAELSDACDNLERQLDKWEVR 162 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL G+ D+ A + V+AGAGGT++QDWA ML RMY W R F +E +GEEAG+ Sbjct: 163 RLLGGKYDAMPALVNVYAGAGGTDAQDWAEMLERMYRGWCNSRGFTWRTVERSEGEEAGL 222 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP--VVDDSIEIEI 223 KS T ++G AYG+L+ E+G HRLVR SP+ ++ R TSF+++ V P E+ + Sbjct: 223 KSVTFEVQGRFAYGYLRSERGTHRLVRQSPFKKDATRQTSFAAVEVTPVLDEGSVEELTL 282 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +SD I T R+ GAGGQ+VN ++AVRI H+PTG+ V+C++ERSQ NKA+ L+AK Sbjct: 283 RDSDLEISTMRSGGAGGQNVNKVETAVRIKHVPTGITVRCEEERSQAANKAKGLARLKAK 342 Query: 284 LYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 L + ++R WG+QIR+YV PY+MVKD+RT E + V+ GDL Sbjct: 343 LVAVAEEQRAADVAAIRGDAVRAEWGQQIRNYVFHPYKMVKDVRTGKETSDVDGVMSGDL 402 Query: 344 DDFMKATLAIKK 355 D+FM L K+ Sbjct: 403 DEFMDEFLRWKR 414 >gi|146283509|ref|YP_001173662.1| peptide chain release factor 1 [Pseudomonas stutzeri A1501] gi|166223591|sp|A4VPB9|RF1_PSEU5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|145571714|gb|ABP80820.1| peptide chain release factor 1 [Pseudomonas stutzeri A1501] Length = 360 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 117/342 (34%), Positives = 178/342 (52%), Gaps = 9/342 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL---IL 72 D R L D + + + RE ++ I +++ D L Sbjct: 9 LDILQDRFEELTALLGDAEVISDQSRFRAYSREYAEVEPVIVAYRQLCKVQQDLEGAQAL 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L+ + + +E ++ +++ Q L D + +LE+ AG GG E+ Sbjct: 69 LKDSDPDMREMAEEEVAEAKAQLETLEANLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AEK+ ++ E L +GE G K ++G N Y LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAEKQGWRVEILSESEGEHGGYKEVISRVEGDNVYAKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ +EI+ ++ RIDTYR+SGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQAAVEINPAELRIDTYRSSGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ+ERSQHKN+A+A L AKL + Q I E+ K +G G Sbjct: 249 THLPTGIVVECQEERSQHKNRAKAMAWLAAKLQD--RQDAAAHKEISETRKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R N+ S ++V+ G ++ ++ L Sbjct: 307 ERIRTYNF-PQGRVTDHRVNLTLYSLNEVIGGAVEQVIEPLL 347 >gi|51891211|ref|YP_073902.1| peptide chain release factor 1 [Symbiobacterium thermophilum IAM 14863] gi|81610729|sp|Q67TD5|RF1_SYMTH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|51854900|dbj|BAD39058.1| peptide chain release factor 1 [Symbiobacterium thermophilum IAM 14863] Length = 356 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 116/347 (33%), Positives = 176/347 (50%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + VQR L K DP + N E + + RE L + + Q + +LE+ Sbjct: 5 LEGVVQRYEDLTYKLGDPSVINNPTEYRQVAREHNRLGPIVEKFRAYQKTERELDDVLEM 64 Query: 76 ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 D + L+ +K + + + L D + +E+ AGAGG E+ Sbjct: 65 LEGPLDPEERALFNQELRDLKEKLQTLSDELRILLLPRDPNDDKNVIMEIRAGAGGDEAS 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYTR AE+ K+KTE L I + E GIK I AY LK E GVHR+ Sbjct: 125 LFAAELFRMYTRLAERHKWKTEVLSISENEAGGIKEVLFQINAEGAYSRLKYEGGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS ++ V P + ++IEI D +I+ RA GAGGQHVN T+SAVR Sbjct: 185 RVPVTESQGRIHTSTVTVAVMP-EMEEVDIEIKPEDLKIEVQRAGGAGGQHVNKTESAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +TH+PTG+VV C ERSQ +N+ +A +LRA++ + Q+ + + ++G G + Sbjct: 244 MTHLPTGIVVYCADERSQMQNREKALRVLRARVADYYAQQAKSEEEQL--RRAQVGTGER 301 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R + + + V+DG++D + A ++ Sbjct: 302 SEKIRTYNF-PQDRVTDHRIGLTVHNIAAVMDGEIDHIIDALAQHEQ 347 >gi|77460969|ref|YP_350476.1| peptide chain release factor 1 [Pseudomonas fluorescens Pf0-1] gi|119361582|sp|Q3K6W9|RF1_PSEPF RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|77384972|gb|ABA76485.1| peptide chain release factor RF-1 [Pseudomonas fluorescens Pf0-1] Length = 360 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 120/346 (34%), Positives = 174/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + + +E L+ + K++ D L Sbjct: 9 LDILQDRFEELTALLGDGEVISDQTKFRAYSKEYAELEPVVQGYKKLLGVQGDLEGAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLE---VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + +L Q L D + +LE+ AG GG E+ Sbjct: 69 LKDSDPDMREMAVEEVREAKELLITLESDLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AE+R ++ E L ++GE G K I+G N YG LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARIEGDNVYGKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI+ +D R+DTYR+SGAGGQHVNTTDSA+RI Sbjct: 189 VPATESQGRIHTSACTVAVLPEPDEREAIEINPADLRVDTYRSSGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG VV+CQ+ERSQHKN+A+A L AKL + Q I K +G G Sbjct: 249 THIPTGTVVECQEERSQHKNRARAMAWLSAKLND--QQTAAAANAIASERKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y V D R N+ S ++L G ++ ++ LA + Sbjct: 307 ERIRTYNFA-QGRVTDHRVNLTLYSLDEILAGGVEAVIEPLLAEYQ 351 >gi|188590258|ref|YP_001919883.1| peptide chain release factor 1 [Clostridium botulinum E3 str. Alaska E43] gi|238689644|sp|B2UZI5|RF1_CLOBA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|188500539|gb|ACD53675.1| peptide chain release factor 1 [Clostridium botulinum E3 str. Alaska E43] Length = 360 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 118/344 (34%), Positives = 190/344 (55%), Gaps = 11/344 (3%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + L+ K DP + QN E + L +E+ L+ ++ KE + + D + E+ + Sbjct: 9 IENKYDELSVKISDPSIMQNQNEWRKLCKEQADLEIIVNAYKEYKQVIEDLQVNKEMLSD 68 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQDWA 134 E D + + ++ + + + E D + ++E+ GAGG E+ +A Sbjct: 69 ESDREMKEMLNEEISSLAEREIELEKEIQILLLPKDPNDDKNVFVEIRGGAGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMYTR+AE++++ TE + +++ + G K +IKG AY LK E GVHR+ R+ Sbjct: 129 YNLFRMYTRYAERQRWSTEIMSLNETDIGGFKEVVFMIKGNGAYSKLKYESGVHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S+ R HTS ++ V P D +EIEI++ D RID +RASG GGQ VNTTDSAVRITH Sbjct: 189 DTESSGRIHTSTVTVAVLP-EVDDVEIEIADKDVRIDVFRASGHGGQCVNTTDSAVRITH 247 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +P+G+VV CQ E+SQ KNK +A +LR++L+E Q+R + I K+++G G + Sbjct: 248 LPSGLVVSCQDEKSQLKNKEKAMKVLRSRLFEKAEQERAD--GIAADRKSQVGTGDRSER 305 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R + LDG++ + + A + + Sbjct: 306 IRTYNY-PQGRITDHRIGLTLYKLDSFLDGEVQEMINALITADQ 348 >gi|187935755|ref|YP_001884696.1| peptide chain release factor 1 [Clostridium botulinum B str. Eklund 17B] gi|238691625|sp|B2TJY5|RF1_CLOBB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|187723908|gb|ACD25129.1| peptide chain release factor 1 [Clostridium botulinum B str. Eklund 17B] Length = 360 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 119/344 (34%), Positives = 190/344 (55%), Gaps = 11/344 (3%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + L+ K DP + QN E + L +E+ L+ ++ KE + + D + E+ + Sbjct: 9 IENKYDELSVKISDPSIMQNQNEWRKLCKEQADLEIIVNAYKEYKQVIEDLQVNKEMLSD 68 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQDWA 134 E D + + ++ + + + E D + ++E+ GAGG E+ +A Sbjct: 69 ESDREMKEMLNEEIASLSQREVELEKEIQILLLPKDPNDDKNVFVEIRGGAGGEEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMYTR+AE++++ TE + +++ + G K +IKG AY LK E GVHR+ R+ Sbjct: 129 YNLFRMYTRYAERQRWSTEIMSLNETDIGGFKEVVFMIKGNGAYSKLKYESGVHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S+ R HTS ++ V P D +EIEI++ D RID +RASG GGQ VNTTDSAVRITH Sbjct: 189 DTESSGRIHTSTVTVAVLP-EVDDVEIEIADKDVRIDVFRASGHGGQCVNTTDSAVRITH 247 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +P+G+VV CQ E+SQ KNK +A +LR++L+E Q+R + I K+++G G + Sbjct: 248 LPSGLVVSCQDEKSQLKNKEKAMKVLRSRLFEKAEQERAD--GIAADRKSQVGTGDRSER 305 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R + LDGD+ + + A + + Sbjct: 306 IRTYNY-PQGRITDHRIGLTLYKLDSFLDGDVQEMINALITADQ 348 >gi|123965444|ref|YP_001010525.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT 9515] gi|123199810|gb|ABM71418.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT 9515] Length = 354 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 138/344 (40%), Positives = 205/344 (59%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 L +FD + V + L +P W N AK M + + + + + + + D Sbjct: 2 LRIVFDVPSLVAKRKELEQIAAEPDFWINQAAAKKHMLNLDDVRDQLQLLDKWKILIADA 61 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LEL + + ++ E+ L ++ ++ +F+ LLSGE D A + ++AGAGGT+ Sbjct: 62 EASLELYSLDPEEEMIVESHLGLVTLRENLDKWEFQRLLSGEYDKESAIVSINAGAGGTD 121 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDW +LLRMY+RWA+ E ++ +GEEAGIKS T + G AYG+L+ E+G HR Sbjct: 122 AQDWVEILLRMYSRWADNNGMSLEITDLSNGEEAGIKSVTFEVNGKYAYGYLQNEKGTHR 181 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVRISP+++N +R TSF+ + V P +D SI +EI + D I T R+ GAGGQ+VN ++A Sbjct: 182 LVRISPFNANGKRQTSFAGVEVMPKLDQSISLEIPDKDLEITTSRSGGAGGQNVNKVETA 241 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRI H+P+G+ V+C QERSQ +NK +A +L+AKL + ++R + + E WG Sbjct: 242 VRILHLPSGIAVRCTQERSQLQNKEKAMLLLKAKLLVIAKEQRAAEISDIKGDIVEAAWG 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 QIR+YV PYQMVKDLRT E VL+G LD F+ L + Sbjct: 302 NQIRNYVFHPYQMVKDLRTMKETNDLDGVLNGGLDQFIHELLRM 345 >gi|146311983|ref|YP_001177057.1| peptide chain release factor 1 [Enterobacter sp. 638] gi|166977363|sp|A4WBC6|RF1_ENT38 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|145318859|gb|ABP61006.1| bacterial peptide chain release factor 1 (bRF-1) [Enterobacter sp. 638] Length = 360 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 113/337 (33%), Positives = 175/337 (51%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAATIADQDRFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE R + + Q L D +A++EV AG GG E+ +A Sbjct: 69 LDDPEMREMAQEELQEAKARAEEMEQQLQVLLLPKDPDDERNAFVEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + ++GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESRRWRVEIMSANEGEHGGYKEVIAKISGEGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P V ++ +I+ D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPEVPEAELPDINPGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L +++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGSRIRAAEIAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ ++++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTIYRLDEIMEGKLDSLIE 342 >gi|86147405|ref|ZP_01065718.1| peptide chain release factor 2 [Vibrio sp. MED222] gi|218708550|ref|YP_002416171.1| peptide chain release factor 2 [Vibrio splendidus LGP32] gi|85834833|gb|EAQ52978.1| peptide chain release factor 2 [Vibrio sp. MED222] gi|218321569|emb|CAV17521.1| Peptide chain release factor 2 [Vibrio splendidus LGP32] Length = 303 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 162/300 (54%), Positives = 217/300 (72%), Gaps = 1/300 (0%) Query: 53 DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112 + + I ++ + D LLELA+EE+D E L ++ ++E +F + SG+ Sbjct: 2 EAVVETIDQLDQGVEDVDGLLELAVEEEDQETFDEIEPELAELEAKLEKLEFRRMFSGDH 61 Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D++D Y+++ +G+GGTE+QDW +M+LRMY RWA+ + FKTE +E+ DG+ AG+K AT+ I Sbjct: 62 DASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWADSKGFKTEVIEVSDGDVAGLKGATVRI 121 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I I+I+ SD RID Sbjct: 122 SGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNITIDINPSDLRIDV 181 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK QA LRAKL+ELE+QK+ Sbjct: 182 YRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELEIQKQ 241 Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E +K++IGWG QIRSYVL +KDLRT IE + VLDGDLD F++A+L Sbjct: 242 NAEKQASEETKSDIGWGSQIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDKFIEASLK 300 >gi|21672964|ref|NP_661029.1| peptide chain release factor 1 [Chlorobium tepidum TLS] gi|28201874|sp|Q8KG45|RF1_CHLTE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|21646023|gb|AAM71371.1| peptide chain release factor 1 [Chlorobium tepidum TLS] Length = 357 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 105/352 (29%), Positives = 181/352 (51%), Gaps = 13/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + + + + DP + + + L +E L + E Sbjct: 1 MFDKLQSIKDKFQTIEQQLSDPEVVADQNRFRKLNKEYSSLKEIVRAYDEWSRTKKQLDE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 + E+D + + ++ + + L EADS +A +E+ AG GG Sbjct: 61 AHSMQKNENDPEMRALVEEEAGELQERLPKLEQQLKILLLPKDEADSRNAIIEIRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGPNAYGWLKGEQG 186 E+ +A L+RMY R+AE++ + + LE+ +G G K +L + G N YG LK E G Sbjct: 121 DEAGLFAADLMRMYQRYAERQGWSCQTLEVSEGSVPGSLKEVSLEVSGHNVYGILKFESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ ++ R HTS +S+ V P + +++EI + D IDT+R+ G GGQ+VN Sbjct: 181 VHRVQRVPETETQGRIHTSAASVAVLP-EAEEVDVEIRKEDLLIDTFRSGGKGGQNVNKV 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 ++AVRITH+P+G+VV CQ+ERSQ +N+ +A MLR+KLY+L++ ++++ ++ + Sbjct: 240 ETAVRITHVPSGIVVACQEERSQLQNRERAMKMLRSKLYDLQIAEQQKSRADL--RRSMV 297 Query: 307 GWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G + IR+Y P V D R + ++ G+LD ++A + Sbjct: 298 TTGDRSAKIRTYNF-PQSRVTDHRIGFTSHALPQIMQGELDPLIEALRMHDQ 348 >gi|114768932|ref|ZP_01446558.1| peptide chain release factor 1 [alpha proteobacterium HTCC2255] gi|114549849|gb|EAU52730.1| peptide chain release factor 1 [alpha proteobacterium HTCC2255] Length = 351 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 121/344 (35%), Positives = 184/344 (53%), Gaps = 12/344 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R +L K D E L +E L + I+ + L D E+ Sbjct: 7 LEQICARFDYLEAKMADGSAVD---EIAKLSKEYSDLKPVVDQIENYKATLLDISEAEEM 63 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 L+ + + +E NL+ + L EAD A +E+ AG GG E+ +A Sbjct: 64 LLDPELKVLAEEELPNLKEKLPILEHKLLLSLLPKDEADDKPAIIEIRAGTGGDEAALFA 123 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+ E + +K E +E ++ E G K A + +KG + LK E GVHR+ R+ Sbjct: 124 GDLLRMYNRFCEDQGWKFEIVEGNETELGGYKEAIINVKGVGVFARLKYESGVHRVQRVP 183 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ + P ++I++EI +D R+DTYR+SGAGGQHVNTTDSAVRITH Sbjct: 184 TTESGGRVHTSAATVAIMP-EAENIDLEIPTTDIRLDTYRSSGAGGQHVNTTDSAVRITH 242 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG++V E+SQH+N+ A N+LR +LY+L Q+++ + K ++G G + Sbjct: 243 LPTGLIVTSS-EKSQHRNREIAMNVLRTRLYDL--QRQQAADERAATRKDQVGSGDRSER 299 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ V+ GDL++F+ A A + Sbjct: 300 IRTYNF-PQGRVSDHRINLTLYKLDQVMQGDLNEFIDALTADDQ 342 >gi|313905737|ref|ZP_07839097.1| peptide chain release factor 1 [Eubacterium cellulosolvens 6] gi|313469444|gb|EFR64786.1| peptide chain release factor 1 [Eubacterium cellulosolvens 6] Length = 360 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 125/351 (35%), Positives = 184/351 (52%), Gaps = 11/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ ++ RL + + DP + + LM+E+ L + Sbjct: 1 MFEKLEDVQIRLDEILCQLSDPATAGDSARMQKLMKEQAELSPVAEMYAAYRKNEETISD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 LEL E D + + + LQ K + L D +E+ AGAGG Sbjct: 61 SLELLESESDPDMREMLKEELQEAKANRSKYERELQLLLLPKDPNDDKSVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RMY R+AEK++++TE + I + G+K + I G AY LK E GV Sbjct: 121 EEAALFAYEIYRMYVRYAEKQRWQTELMSIDETGLGGLKECSFEISGSGAYSKLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P VDD I+IEI + D RID RASG GGQ VNTTD Sbjct: 181 HRVQRVPATESGGRIHTSTITVAVMPKVDDDIQIEIPDKDVRIDVMRASGNGGQCVNTTD 240 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+V+ Q E+SQ +NKA+AW +LR+KLY LE++KR + +++IG Sbjct: 241 SAVRLTHYPTGIVIYSQTEKSQIQNKAKAWELLRSKLYVLEMEKRHDAEADL--RRSQIG 298 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L+GDLD+ ++ A + Sbjct: 299 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHQIDSILNGDLDELIQTLTAADQ 348 >gi|171058449|ref|YP_001790798.1| peptide chain release factor 2 [Leptothrix cholodnii SP-6] gi|170775894|gb|ACB34033.1| peptide chain release factor 2 [Leptothrix cholodnii SP-6] Length = 300 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 148/297 (49%), Positives = 211/297 (71%), Gaps = 1/297 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 ++ I + L DN L E++ +E D + + + ++ +E +F + S AD + Sbjct: 2 VAAIDHLSSNLADNTELYEMSKDEGDLAGITAIEAEVVELRAMIEKLEFRRMFSNPADPS 61 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 + ++++ AGAGGTE+ DWA+MLLR Y ++ E++ FKT + +G+ AGIK+AT+ ++G Sbjct: 62 NCFIDIQAGAGGTEACDWASMLLRQYLKYCERKGFKTTIEDESEGDTAGIKAATIKVEGD 121 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A+G L+ E GVHRLVR SP+DS+ RHTSF+S++VYP VDDSIEI+I+ +D R DT+RA Sbjct: 122 YAFGHLRTETGVHRLVRKSPFDSSGGRHTSFASLFVYPEVDDSIEIDINPADVRTDTFRA 181 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQH+N TDSAVR+THIPTG+VVQCQ RSQH N+ AW LR++LY+ E++KR E Sbjct: 182 SGAGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDFEMRKRMEA 241 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E +KT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 242 QQKLEDTKTDVGWGHQIRSYVLD-QSRIKDLRTNVETSATQKVLDGDLDAFIEASLK 297 >gi|78065073|ref|YP_367842.1| peptide chain release factor 1 [Burkholderia sp. 383] gi|119361516|sp|Q39K18|RF1_BURS3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|77965818|gb|ABB07198.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia sp. 383] Length = 360 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 117/346 (33%), Positives = 176/346 (50%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72 D RL+ LN ++ ++ + + L RE L + + D L Sbjct: 9 LDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRSDETAAQEL 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L D ++ K D + +LE+ AG GG ES Sbjct: 69 LGDLSMRDFAEDEIRSARESMSRLETELQKMLL--PKDPNDERNIFLEIRAGTGGDESAL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A LLRMY R+AE+++++ E + + G K + I G AY LK E G HR+ R Sbjct: 127 FAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+ Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ ++DGDLD+ + A ++ + Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYRLEALMDGDLDELISALVSEHQ 349 >gi|261409698|ref|YP_003245939.1| peptide chain release factor 1 [Paenibacillus sp. Y412MC10] gi|261286161|gb|ACX68132.1| peptide chain release factor 1 [Paenibacillus sp. Y412MC10] Length = 355 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 107/351 (30%), Positives = 180/351 (51%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + R L+ DP + + + + +E+ L A E ++ + + Sbjct: 1 MLDRLQSLADRYEKLSELLCDPDVANDSKKLRDYSKEQSDLQPAYEAYVEYKNVIEELEA 60 Query: 72 LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + E+ D + + QR + E + L D + +E+ AGG Sbjct: 61 AKTMQGEKMDDEMREMVKMEIEELTQREQELAERIRILLLPKDPNDDKNVIIEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A+ L RMYTR+A+ + +K E ++++ + G K +I G AY +K E G Sbjct: 121 DEAALFASDLYRMYTRYADTQGWKVELMDVNTNDLGGFKEVIFMINGRGAYSKMKFESGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +S R HTS S++ V P + ++IEI + D R+DT+ +SGAGGQ VNTT Sbjct: 181 HRVQRIPTTESGGRIHTSTSTVAVMP-EAEEVDIEIHDKDIRVDTFCSSGAGGQSVNTTK 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V CQ +SQ+ NK +A +LRA+++++ Q EE A K+++G Sbjct: 240 SAVRVTHIPTGIVATCQDGKSQNSNKEKALQVLRARIFDMMRQ--EEEAKYAGERKSKVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + V++G++++ + A ++ Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTVHKLDQVMNGEIEEIVSALTLAEQ 347 >gi|187777270|ref|ZP_02993743.1| hypothetical protein CLOSPO_00822 [Clostridium sporogenes ATCC 15579] gi|187774198|gb|EDU38000.1| hypothetical protein CLOSPO_00822 [Clostridium sporogenes ATCC 15579] Length = 358 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 125/347 (36%), Positives = 195/347 (56%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L+ K DP + N E + L +E L+ ++ +E + D E+ Sbjct: 5 LNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLESDKEM 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 EE D + + + ++ + L++E + L D D ++E+ AGAGG E+ Sbjct: 65 LREESDKELREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A+ LLRMYTR+AE++ +K E + ++ + G K T+ +KG AY LK E GVHR+ Sbjct: 125 LFASNLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAVKGKGAYSRLKYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S+ R HTS +++ V P D ++I I+ +D RID YRASG GGQ VNTTDSAVR Sbjct: 185 RVPDTESSGRIHTSTATVAVLP-EVDDVDININANDLRIDVYRASGHGGQCVNTTDSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV CQ E+SQ KNK +A +L+A+L+E E A+I E K+++G G Sbjct: 244 ITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAE--AERAASIAEDRKSQVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + LDGD+D+ ++A + + Sbjct: 302 SERIRTYNY-PQGRITDHRIGLTLYKLETFLDGDIDEVIEALVTEDQ 347 >gi|255993956|ref|ZP_05427091.1| peptide chain release factor 1 [Eubacterium saphenum ATCC 49989] gi|255993624|gb|EEU03713.1| peptide chain release factor 1 [Eubacterium saphenum ATCC 49989] Length = 357 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 112/352 (31%), Positives = 196/352 (55%), Gaps = 13/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68 + D D V++ L P + N + ++E ++ + K+ + L D Sbjct: 1 MLDKLDFIVEKYKELEAAVSKPEIIGNQPLWQKYIKEMSDMEPIVKTYSSFKKHKQELSD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGAG 126 LL A +++ L + + ++ E +Q + + D + LE+ AG G Sbjct: 61 AKELLAGAGGDEEMKDLAKLEISGLEDEINKEEEQLKILLIPKDPRDEKNVILEIRAGTG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ + + LLRMY+ +A+ + +KTE +E+++ GIK A +LIKG A+ LK E G Sbjct: 121 GEEAALFGSDLLRMYSMYADSKNWKTEIIELNETGLNGIKEAVMLIKGKGAFSRLKYESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S+ R HTS +++ V P D +E++++ +D R+D YR+SG GGQ VNTT Sbjct: 181 VHRVQRVPTTESSGRVHTSAATVAVLP-EMDDVEVDLNPNDVRVDVYRSSGNGGQSVNTT 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVR+TH PTG+VV CQ E+SQ KNK +A+ +L+++LY L+++++ + + K+++ Sbjct: 240 DSAVRLTHEPTGIVVTCQDEKSQIKNKDKAFKVLKSRLYNLKMEEQN--KQLSDERKSQV 297 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R + + ++GD+D+ ++ + + Sbjct: 298 GSGDRSERIRTYNF-PQGRVSDHRIGLTIYKLDNFMNGDIDEVIEGLITADQ 348 >gi|251778025|ref|ZP_04820945.1| peptide chain release factor 1 [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082340|gb|EES48230.1| peptide chain release factor 1 [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 360 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 118/344 (34%), Positives = 190/344 (55%), Gaps = 11/344 (3%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + L+ K DP + QN E + L +E+ L+ ++ KE + + D + E+ + Sbjct: 9 IENKYDELSVKISDPSIMQNQNEWRKLCKEQADLEIIVNAYKEYKQVIEDLQVNKEMLSD 68 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQDWA 134 E D + + ++ + + + E D + ++E+ GAGG E+ +A Sbjct: 69 ESDREMKEMLNEEISSLSEREIELEKEIQILLLPKDPNDDKNVFVEIRGGAGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMYTR+AE++++ TE + +++ + G K +IKG AY LK E GVHR+ R+ Sbjct: 129 YNLFRMYTRYAERQRWSTEIMSLNETDIGGFKEVVFMIKGNGAYSKLKYESGVHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S+ R HTS ++ V P D +EIEI++ D RID +RASG GGQ VNTTDSAVRITH Sbjct: 189 DTESSGRIHTSTVTVAVLP-EVDDVEIEIADKDVRIDVFRASGHGGQCVNTTDSAVRITH 247 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +P+G+VV CQ E+SQ KNK +A +LR++L+E Q+R + I K+++G G + Sbjct: 248 LPSGLVVSCQDEKSQLKNKEKAMKVLRSRLFEKAEQERAD--GIAADRKSQVGTGDRSER 305 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R + LDG++ + + A + + Sbjct: 306 IRTYNY-PQGRITDHRIGLTLYKLDSFLDGEVQEMINALITADQ 348 >gi|282850388|ref|ZP_06259767.1| peptide chain release factor 1 [Veillonella parvula ATCC 17745] gi|294792026|ref|ZP_06757174.1| peptide chain release factor 1 [Veillonella sp. 6_1_27] gi|294793891|ref|ZP_06759028.1| peptide chain release factor 1 [Veillonella sp. 3_1_44] gi|282579881|gb|EFB85285.1| peptide chain release factor 1 [Veillonella parvula ATCC 17745] gi|294455461|gb|EFG23833.1| peptide chain release factor 1 [Veillonella sp. 3_1_44] gi|294457256|gb|EFG25618.1| peptide chain release factor 1 [Veillonella sp. 6_1_27] Length = 360 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 110/348 (31%), Positives = 182/348 (52%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + L + DP + E + L R+ L + + + L +E+ Sbjct: 6 LQVIEDKFMDLEQRISDPEVIARQDEWRKLTRQHAQLSETVETFRTYKKVLSGIDEAMEV 65 Query: 76 ALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 ++ +E + + + E Q L D + +E+ GAGG E+ Sbjct: 66 IEDKSMDEEFREMAQEELKDLKPQKEELEEKLQVLLLPKDPNDDKNIIIEIRGGAGGDEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMYT++AE + ++ E ++ ++ E G K + G N Y +K E GVHR+ Sbjct: 126 ALFAGDLFRMYTKYAESQGWRCEIIDANEPELGGFKEVIFSVDGENVYSKMKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS ++ V P + ++IE++E D +IDTYRASGAGGQH+N T+SAV Sbjct: 186 QRVPATETQGRVHTSTVTVAVLP-EMEDVDIEVNEKDLKIDTYRASGAGGQHINKTESAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+P+G+VV CQ +RSQ +N+ +A +LRAKL + ++E I+++ K+++G G Sbjct: 245 RITHLPSGIVVACQDQRSQLQNREKAMRVLRAKLQD--QAEQEAISSMAADRKSQVGTGD 302 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +L+GDLD+ ++A A + Sbjct: 303 RSERIRTYNY-PQGRVTDHRINLTLYKLDAILNGDLDEIIQALNAADQ 349 >gi|221632126|ref|YP_002521347.1| peptide chain release factor 1 [Thermomicrobium roseum DSM 5159] gi|221155596|gb|ACM04723.1| peptide chain release factor 1 [Thermomicrobium roseum DSM 5159] Length = 363 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 120/350 (34%), Positives = 184/350 (52%), Gaps = 11/350 (3%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLC 67 + D QR + + DP + + L RER L+ ++ ++++D ++ Sbjct: 7 SVLDKLAELEQRFDEVERQLADPDVATDPQRVAQLARERAELEEIVALYRQLKDIDRQVA 66 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 LLE + +E + + + + + D D +E+ AG GG Sbjct: 67 QAEELLEAEDPDLVELAAEEIDRLREYRETIYQELRRRLVPRDPNDEKDVIVEIRAGTGG 126 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR+AE++ +K E L E G K ++G AY K E GV Sbjct: 127 EEAALFAADLFRMYTRYAERQGWKVEVLSSSPTELGGFKEIIFEVRGKGAYSHFKHESGV 186 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S+ R HTS +++ V P D +E+ I E D RI+ +R+SG GGQ VNTTD Sbjct: 187 HRVQRVPITESSGRIHTSTATVAVLP-EADEVEVHIDEDDLRIEVFRSSGHGGQSVNTTD 245 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VV CQ ERSQ KN+ +A +LRA+LYEL+ +K EE + ++G Sbjct: 246 SAVRITHLPTGIVVSCQDERSQLKNRLKAMAVLRARLYELQRRKLEEERTGL--RRQQVG 303 Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 G + IR+Y P V D R + + VLDG++D F++ A++ Sbjct: 304 TGERAEKIRTYNF-PQDRVTDHRLKLTVNNLPAVLDGEIDIFIQELQALE 352 >gi|328950071|ref|YP_004367406.1| Peptide chain release factor 1 [Marinithermus hydrothermalis DSM 14884] gi|328450395|gb|AEB11296.1| Peptide chain release factor 1 [Marinithermus hydrothermalis DSM 14884] Length = 369 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 106/344 (30%), Positives = 163/344 (47%), Gaps = 8/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 L + DP + + + L R L + +E L D L Sbjct: 15 LKQLETEYQALEAQLGDPGVLADPKRYRELSRRYAELGEIVRVYREYTKTLDDLEQAQAL 74 Query: 76 ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + E R + L D+ +A +E+ AG GG E+ +A Sbjct: 75 LDDPELGEMARAEKETLEARRDELERELELLLLPKDPVDAKNAIVEIRAGTGGEEAALFA 134 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L MY R+AE+ + E L+ H + G + G AYG K E GVHR+ R+ Sbjct: 135 GDLYNMYVRYAERLGYTVEVLDSHPTDLGGFSKVVFQVNGSGAYGVFKYESGVHRVQRVP 194 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS +++ V P +++ E+ S+ RID RASG GGQ VNTTDSAVR+ H Sbjct: 195 ATETQGRIHTSTATVAVLPEAEEAD-FELDMSEIRIDVQRASGPGGQGVNTTDSAVRVVH 253 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 +PTG++V CQ RSQ KN+ +A +LR++L LE+++ EE A + + +IG G + Sbjct: 254 LPTGIIVTCQDSRSQIKNREKALTILRSRL--LEMKRAEEEAKLRRTRLAQIGTGERSEK 311 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R + + VL G+L++ A + Sbjct: 312 IRTYNF-PQSRVTDHRIHYTTHNLEGVLAGELEELTNALKKADQ 354 >gi|292488088|ref|YP_003530965.1| peptide chain release factor 1 [Erwinia amylovora CFBP1430] gi|292899299|ref|YP_003538668.1| peptide chain release factor 1 (RF-1) [Erwinia amylovora ATCC 49946] gi|291199147|emb|CBJ46261.1| peptide chain release factor 1 (RF-1) [Erwinia amylovora ATCC 49946] gi|291553512|emb|CBA20557.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora CFBP1430] gi|312172219|emb|CBX80476.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora ATCC BAA-2158] Length = 360 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 111/337 (32%), Positives = 174/337 (51%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + ++ Q D + Sbjct: 9 LEALQERHEEVEAMLGDAGVIADQERFRALSREYAQLTDVSQCFRQWQQCQEDIAAAEMM 68 Query: 76 ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + E + + Q L D + YLEV AG GG E+ +A Sbjct: 69 LGDAEMREMAQDELQAARATCEDLEQQLQVLLLPKDPDDERNCYLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R++K E + ++GE G K + G AYG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESRRWKVEVMSANEGEHGGYKEVIAKVIGEGAYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ +I+ SD +IDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A +L +++ E+ +R++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARRQQE--ESSTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ + ++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTIYRLDEAMEGKLDALIE 342 >gi|18311184|ref|NP_563118.1| peptide chain release factor 1 [Clostridium perfringens str. 13] gi|110799590|ref|YP_696880.1| peptide chain release factor 1 [Clostridium perfringens ATCC 13124] gi|110802815|ref|YP_699476.1| peptide chain release factor 1 [Clostridium perfringens SM101] gi|168205561|ref|ZP_02631566.1| peptide chain release factor 1 [Clostridium perfringens E str. JGS1987] gi|168210131|ref|ZP_02635756.1| peptide chain release factor 1 [Clostridium perfringens B str. ATCC 3626] gi|168213694|ref|ZP_02639319.1| peptide chain release factor 1 [Clostridium perfringens CPE str. F4969] gi|168215831|ref|ZP_02641456.1| peptide chain release factor 1 [Clostridium perfringens NCTC 8239] gi|169344167|ref|ZP_02865149.1| peptide chain release factor 1 [Clostridium perfringens C str. JGS1495] gi|182624062|ref|ZP_02951850.1| peptide chain release factor 1 [Clostridium perfringens D str. JGS1721] gi|20139327|sp|Q8XIB9|RF1_CLOPE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361525|sp|Q0TNB0|RF1_CLOP1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361526|sp|Q0SQY1|RF1_CLOPS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|18145867|dbj|BAB81908.1| peptide chain release factor 1 [Clostridium perfringens str. 13] gi|110674237|gb|ABG83224.1| peptide chain release factor 1 [Clostridium perfringens ATCC 13124] gi|110683316|gb|ABG86686.1| peptide chain release factor 1 [Clostridium perfringens SM101] gi|169297625|gb|EDS79725.1| peptide chain release factor 1 [Clostridium perfringens C str. JGS1495] gi|170662868|gb|EDT15551.1| peptide chain release factor 1 [Clostridium perfringens E str. JGS1987] gi|170711762|gb|EDT23944.1| peptide chain release factor 1 [Clostridium perfringens B str. ATCC 3626] gi|170714864|gb|EDT27046.1| peptide chain release factor 1 [Clostridium perfringens CPE str. F4969] gi|177910955|gb|EDT73309.1| peptide chain release factor 1 [Clostridium perfringens D str. JGS1721] gi|182382220|gb|EDT79699.1| peptide chain release factor 1 [Clostridium perfringens NCTC 8239] Length = 360 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 124/351 (35%), Positives = 192/351 (54%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + + L+ K DP + N E + L +E L+ ++ KE ++ + Sbjct: 2 ILDRLNFIENKYDELSVKISDPSIMANQKEWRKLCKEHADLEVIVNKYKEYKEATEELEA 61 Query: 72 LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 E+ EE D + + + +R K + Q L D + ++E+ GAGG Sbjct: 62 NKEMLSEESDQEMREMINSEIKDLTERKKELEDEIQILLLPKDPNDDKNVFVEIRGGAGG 121 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYT++AEK ++K E + ++ + G K +IKG AY LK E G Sbjct: 122 DEAALFAANLFRMYTKYAEKNRWKVELMSANETDIGGFKEVVFMIKGAGAYSKLKYESGA 181 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S+ R HTS +++ V P D +EIEI++ D +ID +RASG GGQ VNTTD Sbjct: 182 HRVQRVPDTESSGRIHTSTATVAVLP-EVDDVEIEINDKDIKIDVFRASGNGGQCVNTTD 240 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+P+G+VV CQ E+SQ KNK +A +LRA+L+ E + E +A I E K+++G Sbjct: 241 SAVRITHLPSGLVVSCQDEKSQLKNKEKAMKVLRARLF--EQAEAERLAGIAEDRKSQVG 298 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R N+ L+GD+D+ + A + + Sbjct: 299 TGDRSERIRTYNY-PQGRVTDHRINMTLYKLDSFLEGDIDEILNALITEDQ 348 >gi|182415309|ref|YP_001820375.1| peptide chain release factor 1 [Opitutus terrae PB90-1] gi|177842523|gb|ACB76775.1| peptide chain release factor 1 [Opitutus terrae PB90-1] Length = 383 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 107/348 (30%), Positives = 170/348 (48%), Gaps = 12/348 (3%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 D +RL L+ + +P + N A + RE+Q L ++ +E + Sbjct: 14 DLAPFQRRLDELDAQMAEPTFYANARRAAEVSREQQKLQQLVADYQEYDRLGREAAEAAA 73 Query: 75 LALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L + L+E + + + DS + +E+ AG GG E Sbjct: 74 LGKDPAADPDLRELAQAELPELERRRAALRQAVLLAMIPPDPTDSRNTVMEIRAGTGGDE 133 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A L RMY+R+A+ + +K + + E G K LI G + Y LK E GVHR Sbjct: 134 ASLFAADLFRMYSRYADGQGWKIQPMSSSMSERGGFKEVIFLISGTDVYKRLKFESGVHR 193 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ ++N R HTS ++ V P + ++++I + I RASG GGQ VNTTDSA Sbjct: 194 VQRVPVTEANGRIHTSTVTVAVLP-EAEEVDVQIDPQELEITVTRASGPGGQGVNTTDSA 252 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 V+I H PTG++V C ERSQ KNKA+A +LR++L L+ ++ EE A + +++IG G Sbjct: 253 VQIVHKPTGLIVTCADERSQIKNKAKALTVLRSRL--LQRREEEERAKYAATRRSQIGSG 310 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D R + + VL+G +D + A Sbjct: 311 DRSERIRTYNF-PQNRLTDHRIGLTLYNLPQVLEGGIDPIIAALHKAD 357 >gi|116333899|ref|YP_795426.1| peptide chain release factor 1 [Lactobacillus brevis ATCC 367] gi|122269414|sp|Q03QX7|RF1_LACBA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|116099246|gb|ABJ64395.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus brevis ATCC 367] Length = 361 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 110/351 (31%), Positives = 181/351 (51%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68 +FD R LN DP + + L +E L + + Q ++ D Sbjct: 4 MFDKLQAVADRYDELNELISDPEVIADTQRFMALSKEEGELRETVDKYHQYQDVTQQIAD 63 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + +L L+ D S++++ L K E + L D + +E+H AGG Sbjct: 64 DDEMLHDKLDADMESMIKDELKELTAQKAALEEDIKVLLLPKDPNDDKNIIMEIHGAAGG 123 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L MY+++AE++ ++ E ++ + E G K ++I G Y LK E G Sbjct: 124 DEASLFAADLFSMYSKYAERQGWQIEVVDENATEVGGFKEIVMMITGNKVYSKLKYENGA 183 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P ++ ++I+I D R D YR+SGAGGQH+N T Sbjct: 184 HRVQRVPVTESAGRVHTSTATVGVMP-EEEDVDIDIDPKDIRTDVYRSSGAGGQHINKTS 242 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+VV Q ERSQ +N+A+A +LRA++Y+ K++E + K+ +G Sbjct: 243 SAVRMTHLPTGIVVAMQDERSQQQNRAKAMQILRARVYDYY--KQQEESAYNAERKSAVG 300 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++G+LDD + A + + Sbjct: 301 TGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDDIIDALIVSDQ 350 >gi|237793457|ref|YP_002861009.1| peptide chain release factor 1 [Clostridium botulinum Ba4 str. 657] gi|259585216|sp|C3KYH5|RF1_CLOB6 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|229260673|gb|ACQ51706.1| peptide chain release factor 1 [Clostridium botulinum Ba4 str. 657] Length = 358 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 126/347 (36%), Positives = 195/347 (56%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L+ K DP + N E + L +E L+ ++ +E + D E+ Sbjct: 5 LNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLESDKEM 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 EE D + + + ++ + L++E + L D D ++E+ AGAGG E+ Sbjct: 65 LKEESDKDLREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAGGEEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A+ LLRMYTR+AE++ +K E + ++ + G K T+ IKG AY LK E GVHR+ Sbjct: 125 LFASNLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAIKGKGAYSRLKYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S+ R HTS +++ V P D ++I I+ +D RID YRASG GGQ VNTTDSAVR Sbjct: 185 RVPDTESSGRIHTSTATVAVLP-EVDDVDININANDLRIDVYRASGHGGQCVNTTDSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV CQ E+SQ KNK +A +L+A+L+E E A+I E K+++G G Sbjct: 244 ITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAE--AERAASIAEDRKSQVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + LDGD+D+ ++A + + Sbjct: 302 SERIRTYNY-PQGRITDHRIGLTLYKLETFLDGDIDEVIEALVTEDQ 347 >gi|226953405|ref|ZP_03823869.1| peptide chain release factor 2 [Acinetobacter sp. ATCC 27244] gi|294651888|ref|ZP_06729178.1| peptide chain release factor RF2 [Acinetobacter haemolyticus ATCC 19194] gi|226835836|gb|EEH68219.1| peptide chain release factor 2 [Acinetobacter sp. ATCC 27244] gi|292822211|gb|EFF81124.1| peptide chain release factor RF2 [Acinetobacter haemolyticus ATCC 19194] Length = 297 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 161/295 (54%), Positives = 211/295 (71%), Gaps = 1/295 (0%) Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 + ++L D +L+LA+E DD S+L + L + + +F + S D N + Sbjct: 2 FDRLAEQLDDAKAMLDLAVEADDESLLLDVQAELDSAEQALGNLEFRRMFSNPMDPNPCF 61 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 LE+ +G+GGTE+QDWA+MLLRMY RW E+ FK E +E+ DG+ AGIKSAT+ + G AY Sbjct: 62 LEIQSGSGGTEAQDWASMLLRMYLRWIERHGFKAELMEVSDGDVAGIKSATIRVDGEFAY 121 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 GWL+ E GVHRLVR SP+DSN+ RHTSFS++++ P +DD+IEI+I+ SD R DTYRASGA Sbjct: 122 GWLRTESGVHRLVRKSPFDSNNNRHTSFSAVFISPEIDDNIEIDINPSDVRTDTYRASGA 181 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQH+N TDSAVR+TH PTG+VV CQ +RSQH N+ AW LRAKLYELE+ KR E A Sbjct: 182 GGQHINKTDSAVRLTHAPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMSKRNEAAQA 241 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 E SK++IGWG QIRSYVL +KDLRT +E ++ VLDGDLD F++A+L Sbjct: 242 LEDSKSDIGWGSQIRSYVLDD-SRIKDLRTGVENSNTKAVLDGDLDKFIEASLKQ 295 >gi|224368815|ref|YP_002602976.1| PrfA [Desulfobacterium autotrophicum HRM2] gi|223691531|gb|ACN14814.1| PrfA [Desulfobacterium autotrophicum HRM2] Length = 391 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 105/356 (29%), Positives = 170/356 (47%), Gaps = 16/356 (4%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 + L +N L G+ +R L DP + + ++ + ++E L +S Sbjct: 33 LDLQNMINKLQGI------KERYIKLENLLSDPAVIADQVKYQRCLKEHGELTKVVSAFA 86 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETS---DNLQRIKLEVEYKQFESLLSGEADSNDA 117 + Q L +LA + D D + + + + D + Sbjct: 87 DYQAVLQQMGEAKDLAKDPDPDIREMAKEETADLRAQREGLESKLKLLLMPKDPRDDKNV 146 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 LE+ AG GG E+ +A L RMY+R+AE + + +E G K +IKG A Sbjct: 147 ILEIRAGTGGEEAGLFAADLFRMYSRYAEIKGWTVNVIESSHSSAGGFKEVISMIKGNGA 206 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 + K E G HR+ R+ ++ R HTS ++ V P + +E++I S+ ++D +RASG Sbjct: 207 FSAFKYESGTHRVQRVPETETQGRVHTSAVTVAVLP-EAEDVELKIEPSELKVDVFRASG 265 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQ VNTTDSAVRITH+PTG+V CQ E+SQ KNK A +L+A++ + + RE+ A Sbjct: 266 PGGQSVNTTDSAVRITHLPTGIVATCQDEKSQIKNKIAALKVLKARILDAMV--REQEAK 323 Query: 298 IGESSKTEIGWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 K ++G G +IR+Y P + D R + +++ GD+ D + Sbjct: 324 RAAQRKGQVGTGDRSGRIRTYNF-PQGRMTDHRIGLTLYRLDNIMGGDIQDIIDEL 378 >gi|167769908|ref|ZP_02441961.1| hypothetical protein ANACOL_01249 [Anaerotruncus colihominis DSM 17241] gi|167667899|gb|EDS12029.1| hypothetical protein ANACOL_01249 [Anaerotruncus colihominis DSM 17241] Length = 358 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 108/352 (30%), Positives = 175/352 (49%), Gaps = 13/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D+ R ++ + +P + + + LM+E L + + + Sbjct: 1 MFDKLDSVAARYEEISRRLMEPDVTGDPEQYASLMKEYSRLTPIVEKYRAYRTAKDACDE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIK-----LEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 E+ E ++E + + + L D + +E+ GAG Sbjct: 61 AREVLDESGVDREMRELAQEQLDENRAVLDQTAQELKILLLPRDPNDDKNVIVEIRGGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A +L RMYT +AE ++ E + ++ E G K I G AY LK E G Sbjct: 121 GEEAALFAGVLYRMYTMYAEGLGWQCEVISANETELGGYKEICFSITGEGAYSRLKYESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ ++ R HTS ++ V P + +E E+ D +ID +R+SGAGGQHVN T Sbjct: 181 VHRVQRVPETETQGRIHTSTVTVAVLP-EAEEVEFELDPRDLQIDVFRSSGAGGQHVNKT 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SA+R+TH+PTG+VV+CQ ERSQ+KNK +A +LRA+L ++++ RE+ I + ++ Sbjct: 240 SSAIRVTHLPTGMVVECQDERSQYKNKDRALKVLRARLLDIKV--REQNDKIATERRLQV 297 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R + VL+GDL + A + + Sbjct: 298 GTGDRSERIRTYNY-PQGRVTDHRIGLTLYKLDSVLNGDLAELFDALMTFDQ 348 >gi|229551967|ref|ZP_04440692.1| peptide chain release factor RF1 [Lactobacillus rhamnosus LMS2-1] gi|229314702|gb|EEN80675.1| peptide chain release factor RF1 [Lactobacillus rhamnosus LMS2-1] Length = 386 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 108/352 (30%), Positives = 178/352 (50%), Gaps = 12/352 (3%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +F+ D + R L DP + + L +E + + ++ K+ + L D Sbjct: 30 KIFEQLDGLLVRYEELEELMSDPEVISDTKRYLALSKEEGGMRDVVAAYKKYKQVLSDIK 89 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAG 126 E+ E D + ++L+ ++ + + L D + +E+ AG Sbjct: 90 ESEEVLRESKDEDMEALAKEDLEDLQKQKADLEEKIKVLMLPKDPNDDKNIIMEIRGAAG 149 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A LL MY +AE++ +K E ++ E G K ++I G N Y LK E G Sbjct: 150 GDEASLFAGDLLNMYMHYAERQGWKAEIVDSTPTEVGGYKEVVVMITGDNVYSKLKYENG 209 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P D ++++I D R D YR+SGAGGQHVN T Sbjct: 210 AHRVQRVPVTESAGRVHTSTATVGVMP-EYDEVDLKIDPKDIRTDVYRSSGAGGQHVNKT 268 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+THIPTG+VV Q ERSQ +N+A+A +LR+++Y+ + +E ++ K I Sbjct: 269 SSAVRMTHIPTGIVVSMQDERSQQENRARAMQILRSRVYDYYETENQE--KYDQNRKNAI 326 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R + +++G+LD+ + A + + Sbjct: 327 GTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIVHDQ 377 >gi|304383714|ref|ZP_07366173.1| peptide chain release factor RF2 [Prevotella marshii DSM 16973] gi|304335238|gb|EFM01509.1| peptide chain release factor RF2 [Prevotella marshii DSM 16973] Length = 374 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 120/359 (33%), Positives = 203/359 (56%), Gaps = 12/359 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L + D +T+ P W++ A+ M++ + + + E+ Sbjct: 10 VQERAEALFRYLEIDKKQIEYEEEELRTQAPDFWEDTARAQEQMKKVKGIKRWLDGYAEV 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + + D+ +E D+ ++ +E + ++L + D L+++ Sbjct: 70 RTLTDELQLAFDFY--HDEMVTEEEVEDDYRKAVKAIENLELMNMLRQKEDPMGCVLKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PNAYGWL 181 +GAGGTESQDWA ML+RMY RWAE ++ + +G+EAGIKS T+ I+G AYG+L Sbjct: 128 SGAGGTESQDWAQMLMRMYVRWAEAHGYRCTISNLQEGDEAGIKSVTMEIEGGEYAYGYL 187 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVR+SP+++ +R TSF+S++V P+VDD+IE+ + + D +R+ GAGGQ Sbjct: 188 KSENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDTIEVYVDPAKVSWDLFRSGGAGGQ 247 Query: 242 HVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 +VN ++ VR+ + T ++++ + R Q +N+ A +L+++LY+ ++KR Sbjct: 248 NVNKVETGVRLRYQYTDPDTGEEEEILIENTESRKQLENRNNAMRLLKSQLYDRAMKKRL 307 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E E+ K +I WG QIRSYV + VKD RTN + T V+DG +D+F+KA L Sbjct: 308 EAQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTTDVDGVMDGKIDEFIKAYLM 365 >gi|269798159|ref|YP_003312059.1| peptide chain release factor 1 [Veillonella parvula DSM 2008] gi|269094788|gb|ACZ24779.1| peptide chain release factor 1 [Veillonella parvula DSM 2008] Length = 360 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 110/348 (31%), Positives = 182/348 (52%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + L + DP + E + L R+ L + + + L +E+ Sbjct: 6 LQVIEDKFMDLEQRISDPEVIARQDEWRKLTRQHAQLSETVETFRTYKKVLSGIDEAMEV 65 Query: 76 ALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 ++ +E + + + E Q L D + +E+ GAGG E+ Sbjct: 66 IEDKSMDEEFREMAQEELKELKPQKEELEEKLQVLLLPKDPNDDKNIIIEIRGGAGGDEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMYT++AE + ++ E ++ ++ E G K + G N Y +K E GVHR+ Sbjct: 126 ALFAGDLFRMYTKYAESQGWRCEIIDANEPELGGFKEVIFSVDGENVYSKMKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS ++ V P + ++IE++E D +IDTYRASGAGGQH+N T+SAV Sbjct: 186 QRVPATETQGRVHTSTVTVAVLP-EMEDVDIEVNEKDLKIDTYRASGAGGQHINKTESAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+P+G+VV CQ +RSQ +N+ +A +LRAKL + ++E I+++ K+++G G Sbjct: 245 RITHLPSGIVVACQDQRSQLQNREKAMRVLRAKLQD--QAEQEAISSMAADRKSQVGTGD 302 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +L+GDLD+ ++A A + Sbjct: 303 RSERIRTYNY-PQGRVTDHRINLTLYKLDAILNGDLDEIIQALNAADQ 349 >gi|119897272|ref|YP_932485.1| peptide chain release factor 1 [Azoarcus sp. BH72] gi|166223529|sp|A1K443|RF1_AZOSB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119669685|emb|CAL93598.1| peptide chain release factor [Azoarcus sp. BH72] Length = 361 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 115/344 (33%), Positives = 184/344 (53%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ RL+ L+ + +++ + L RER L+ ++ + D EL Sbjct: 9 LEHLAGRLAELDRELSSEDATRDMNAFRDLSRERAELEPVVALYGAYRQAEQDCATAREL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + + + + Q L D + +LE+ AG GG E+ +A Sbjct: 69 LDDPEMQELGRSELEAGEARIAALDGDLQRALLPRDPNDERNLFLEIRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY+R+AE+++++ E + + + G K I G AY LK E G HR+ RI Sbjct: 129 GDLLRMYSRYAERQRWRVEIVSSNPSDLGGYKEVIARIVGAGAYSRLKFESGGHRVQRIP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ +EI+ +D RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 189 VTETQGRIHTSACTVAVMPEADELAAVEINPADLRIDTFRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQH+NKAQA +L A+L + +L+ R+ + + ++ IG G + Sbjct: 249 LPTGLVVECQDDRSQHRNKAQAMAVLAARLNDAQLRARQ--SAEAATRRSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ V+ G+LD+ + A + + Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKLDAVMQGELDELLAALVLEHQ 349 >gi|148549433|ref|YP_001269535.1| peptide chain release factor 2 [Pseudomonas putida F1] gi|148513491|gb|ABQ80351.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudomonas putida F1] Length = 304 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 166/302 (54%), Positives = 219/302 (72%), Gaps = 1/302 (0%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 L + + ++ L D LL++A+EE+D + + + L+ ++ + +F + SGE Sbjct: 2 LAQVVETLDKLSGGLADCKDLLDMAVEENDENAVSDVVTELEGLEENLAQLEFRRMFSGE 61 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F +E+ +GE AGIK AT+ Sbjct: 62 MDMNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVH 121 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 IKG A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EI+I+ SD RID Sbjct: 122 IKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIDINPSDLRID 181 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 TYR+SGAGGQHVNTTDSAVRITH+PT VV CQ ERSQH NK A MLRAKLYELE+QK Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQK 241 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R + E SK++IGWG QIRSYVL +KDLRT +E++ VLDGDLD +++A+L Sbjct: 242 RNAASQALEDSKSDIGWGHQIRSYVLDD-SRIKDLRTGVERSDCQKVLDGDLDQYLEASL 300 Query: 352 AI 353 Sbjct: 301 KQ 302 >gi|322514782|ref|ZP_08067805.1| peptide chain release factor RF2 [Actinobacillus ureae ATCC 25976] gi|322119244|gb|EFX91374.1| peptide chain release factor RF2 [Actinobacillus ureae ATCC 25976] Length = 301 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 157/299 (52%), Positives = 213/299 (71%), Gaps = 1/299 (0%) Query: 55 AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114 ++ I+ + + D L+ELA+E +D E ++ ++ +F+ + SG+ D+ Sbjct: 2 VVNTIRALAQGVEDVEGLIELAVEAEDEDTFNEAQAEANELEEKLAKLEFQRMFSGQHDA 61 Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 D Y+++ AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G Sbjct: 62 ADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITG 121 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YR Sbjct: 122 EYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYR 181 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 ASGAGGQHVN T+SAVRITHIP+G+VVQCQ RSQH+NK Q L+AKLYE+E+ K+ Sbjct: 182 ASGAGGQHVNKTESAVRITHIPSGIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNA 241 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 E SK++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 242 EKQAMEESKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKFIEASLKA 299 >gi|300723054|ref|YP_003712352.1| peptide chain release factor RF-1 [Xenorhabdus nematophila ATCC 19061] gi|297629569|emb|CBJ90172.1| peptide chain release factor RF-1 [Xenorhabdus nematophila ATCC 19061] Length = 360 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 113/344 (32%), Positives = 178/344 (51%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L +E L + + K + D + Sbjct: 9 LEALQERHEEVLAHLGDAEVIADQERFRALSKEYAQLTDVTNCFKAWKSVQDDLETAEMM 68 Query: 76 ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + E D R + + Q L D + +LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQAELKDAKIRNEELEQQLQVLLLPKDPDDERNCFLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + ++GE G K + G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESRRWRVEIMSANEGEHGGYKEVIAKVSGEQVYGHLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P V ++ EI+ D +IDTYR+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAILPEVPEAELPEINPGDLKIDTYRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ E++KR+E + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMRKRQE--AEASERRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R+Y P V D R N+ ++++G LD ++ + + Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLEEIMEGKLDMLIQPIITEYQ 349 >gi|253990004|ref|YP_003041360.1| peptide chain release factor 1 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781454|emb|CAQ84617.1| peptide chain release factor rf-1 [Photorhabdus asymbiotica] Length = 360 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 120/337 (35%), Positives = 178/337 (52%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + + K + D + Sbjct: 9 LEALQERHEEVLAHLGDADVIADQERFRALSREYAQLTDVTTCFKTWRTVQDDLKAAEMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE + R + + Q L D + +LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQEEIKDAKARNEELEQQLQLLLLPKDPDDERNCFLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R++K E + +DGE G K + G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESRRWKIEVMSANDGEHGGYKEIIAKVSGEQVYGHLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ EIS SD RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVLPEIPEAELPEISPSDLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV+CQ ERSQHKNKA+A ++L A++ E++KR+E + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLAARIRAAEVRKRQE--AEASERRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ +V++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQ 342 >gi|149927857|ref|ZP_01916108.1| peptide chain release factor 2 [Limnobacter sp. MED105] gi|149823479|gb|EDM82710.1| peptide chain release factor 2 [Limnobacter sp. MED105] Length = 304 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 156/302 (51%), Positives = 214/302 (70%), Gaps = 1/302 (0%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 LD + + +Q + D+ L+E+A E D L+ + + + +F + S Sbjct: 2 LDGVVVTMNTVQSNISDSKELVEMAEAEGDFDTLEAIESEVAEYEKVIADLEFRRMFSNP 61 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD + ++++ AGAGGTE+QDWA++LLR Y R+ E++ FK E +E DGE AGIKSAT+ Sbjct: 62 ADPANCFIDITAGAGGTEAQDWASILLRQYLRYCERKGFKVEVMEQSDGEVAGIKSATIK 121 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 ++G A+G+L+ E GVHRLVR SP+DS+ RHTSF+S++VYP VDDS EIEI+ +D R D Sbjct: 122 VEGEYAFGYLRTETGVHRLVRKSPFDSSGGRHTSFASLFVYPEVDDSFEIEINPADVRTD 181 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 TYRASGAGGQH+N TDSAVR+THIPTG+VVQCQ +RSQH+N+ +AW ML+AKLYE E++K Sbjct: 182 TYRASGAGGQHINKTDSAVRLTHIPTGIVVQCQNDRSQHRNRDEAWGMLKAKLYEFEMRK 241 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R E +KT++GWG QIRSYVL +KDLRT +E ++ VLDGDLD F++A+L Sbjct: 242 RMAEQQALEDTKTDVGWGHQIRSYVLD-NSRIKDLRTGVEISNTQRVLDGDLDPFIEASL 300 Query: 352 AI 353 Sbjct: 301 KQ 302 >gi|302380176|ref|ZP_07268648.1| peptide chain release factor 1 [Finegoldia magna ACS-171-V-Col3] gi|302311959|gb|EFK93968.1| peptide chain release factor 1 [Finegoldia magna ACS-171-V-Col3] Length = 355 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 116/351 (33%), Positives = 194/351 (55%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ D+ V + L K DP + ++ LM+E L+ ++ +D L + Sbjct: 1 MFENLDSVVDKFKDLEVKVADPEVIADMENWTKLMKEHADLEPVVNKYLSYKDNLKNLEE 60 Query: 72 LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 EL D + + D ++I+ + E + L D + ++E+ AGAGG Sbjct: 61 DKELLGTTGDSEMEELLKDEISTLEEQIEKDQEELKILLLPKDPNDEKNVFIEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A LLRMY +++K+ + TE ++I GIK +++KG AY LK E GV Sbjct: 121 DEAGLFAGELLRMYQMYSDKKHWTTEIMDIQQQGVGGIKEVVMMVKGKGAYSRLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S+ R HTS +++ V P + ++++I + D RID +RASG GGQ VNTTD Sbjct: 181 HRVQRVPQTESSGRIHTSTATVAVLP-EAEDVDVKIEQKDLRIDVFRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTG+VV CQ E+SQ KNK +A +L+++L++L +++ + ++ K+++G Sbjct: 240 SAVRITHIPTGLVVTCQDEKSQIKNKDKAMKVLKSRLFDLMEEEKN--KDRADARKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P + D R N + LDGD+++ + + + Sbjct: 298 TGDRSERIRTYNF-PQGRITDHRINKTIFQLQNFLDGDIEEMIDDLTSYDQ 347 >gi|89094907|ref|ZP_01167839.1| peptide chain release factor 1 [Oceanospirillum sp. MED92] gi|89080864|gb|EAR60104.1| peptide chain release factor 1 [Oceanospirillum sp. MED92] Length = 362 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 117/341 (34%), Positives = 175/341 (51%), Gaps = 9/341 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R L DP + + + + E L+ + + D + Sbjct: 9 LEKLSDRYEELAALLSDPEVISDQEKFREYSMEYSELEPVVKAFEAYTQAQEDLEEAEMM 68 Query: 76 ALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + RI+ Q L DS + +LEV AG GG E+ Sbjct: 69 MADSDPDMREMAKEEYPEVKARIESLEGELQILLLPKDPNDSRNVFLEVRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE + ++ E + ++GE G K I G N Y LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAEVQGWRVEVVSANEGEHGGYKEIISRIVGTNVYSQLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ + +D+S EIEI+++D RIDT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRIHTSACTVAIMAEMDESAEIEINKADLRIDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTGVVV+CQ+ERSQHKN+A+A ++L ++L E + A + + K+ +G G Sbjct: 249 THIPTGVVVECQEERSQHKNRAKAMSLLASRLQAAEE--ERQAAELASTRKSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R N+ +V+ G+L ++ Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLQEVISGELQHVVEPL 346 >gi|256023112|ref|ZP_05436977.1| peptide chain release factor 1 [Escherichia sp. 4_1_40B] Length = 360 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 114/344 (33%), Positives = 179/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ ++ + + Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + D+ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R+Y P V D R N+ +V++G LD ++ + + Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIREHQ 349 >gi|153939567|ref|YP_001389502.1| peptide chain release factor 1 [Clostridium botulinum F str. Langeland] gi|168182252|ref|ZP_02616916.1| peptide chain release factor 1 [Clostridium botulinum Bf] gi|170755459|ref|YP_001779766.1| peptide chain release factor 1 [Clostridium botulinum B1 str. Okra] gi|166223550|sp|A7G9P2|RF1_CLOBL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|229576659|sp|B1IE21|RF1_CLOBK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|152935463|gb|ABS40961.1| peptide chain release factor 1 [Clostridium botulinum F str. Langeland] gi|169120671|gb|ACA44507.1| peptide chain release factor 1 [Clostridium botulinum B1 str. Okra] gi|182674565|gb|EDT86526.1| peptide chain release factor 1 [Clostridium botulinum Bf] gi|295317603|gb|ADF97980.1| peptide chain release factor 1 [Clostridium botulinum F str. 230613] gi|322804409|emb|CBZ01959.1| peptide chain release factor 1 [Clostridium botulinum H04402 065] Length = 358 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 126/347 (36%), Positives = 195/347 (56%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L+ K DP + N E + L +E L+ ++ +E + D E+ Sbjct: 5 LNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLESDKEM 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 EE D + + + ++ + L++E + L D D ++E+ AGAGG E+ Sbjct: 65 LKEESDKELREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAGGEEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A+ LLRMYTR+AE++ +K E + ++ + G K T+ IKG AY LK E GVHR+ Sbjct: 125 LFASNLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAIKGKGAYSRLKYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S+ R HTS +++ V P D ++I I+ +D RID YRASG GGQ VNTTDSAVR Sbjct: 185 RVPDTESSGRIHTSTATVAVLP-EVDDVDININANDLRIDVYRASGHGGQCVNTTDSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV CQ E+SQ KNK +A +L+A+L+E E A+I E K+++G G Sbjct: 244 ITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAE--AERAASIAEDRKSQVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + LDGD+D+ ++A + + Sbjct: 302 SERIRTYNY-PQGRITDHRIGLTLYKLETFLDGDIDEVIEALVTEDQ 347 >gi|83644616|ref|YP_433051.1| peptide chain release factor 2 [Hahella chejuensis KCTC 2396] gi|83632659|gb|ABC28626.1| peptide chain release factor 2 [Hahella chejuensis KCTC 2396] Length = 301 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 168/299 (56%), Positives = 221/299 (73%), Gaps = 1/299 (0%) Query: 55 AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114 + + ++ L D LL++A+EE D + E L+ I+ +VE +F + +GE D Sbjct: 2 VVKTVDDVTGGLTDCSDLLDMAVEEQDADAVTEVETELESIRAQVETLEFRRMFAGEMDP 61 Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 N+AYL++ AG+GGTE+QDWA++LLRMY RW E+R FKT+ +E GE AGIKSAT+ +G Sbjct: 62 NNAYLDIQAGSGGTEAQDWASILLRMYLRWGERRGFKTDLIEESPGEVAGIKSATIHFQG 121 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 AYGWL+ E GVHRLVR SP+DS +RRHTSF+S++V P VDD IEI+I+ +D RID YR Sbjct: 122 EYAYGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVSPEVDDDIEIDINPADLRIDVYR 181 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 ASGAGGQHVN T+SAVRITH+P+G+V QCQ +RSQHKNK QA L+AKLYELE+QKR Sbjct: 182 ASGAGGQHVNRTESAVRITHMPSGIVTQCQNDRSQHKNKDQAMKQLKAKLYELEIQKRNA 241 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 A E SK++IGWG QIRSYVL +KDLRT+IE ++ VLDGD+D+F++A+L Sbjct: 242 EAQQLEDSKSDIGWGSQIRSYVLD-QSRIKDLRTSIENSNCQAVLDGDIDEFIEASLKQ 299 >gi|108759492|ref|YP_633064.1| peptide chain release factor 1 [Myxococcus xanthus DK 1622] gi|20139339|sp|Q93NC7|RF1_MYXXA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361565|sp|Q1D2Q9|RF1_MYXXD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|14517940|gb|AAK64443.1|AF377339_4 peptide chain release factor RF-1 [Myxococcus xanthus] gi|108463372|gb|ABF88557.1| peptide chain release factor 1 [Myxococcus xanthus DK 1622] Length = 362 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 98/345 (28%), Positives = 176/345 (51%), Gaps = 11/345 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D ++ +R L +P + + + + +ER L+ + + + L D Sbjct: 1 MIDKLEDVERRFERLTADLSNPDVLADSARLQKVSKERAGLEKLVEAFRTYRKVLADLSE 60 Query: 72 LLELALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 + D ++ + L D + LE+ AGAGG Sbjct: 61 VEAWLGSSDADEKAFARESLPGLKEQRDELEASLKILLLPKDPNDEKNVILEIRAGAGGD 120 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A +++MY R+A++R +K + L++ G G+K AT+ + G + +K E GVH Sbjct: 121 EAALFAEEVMQMYLRYADRRGWKADILDMSPGNAGGVKDATVTLSGDAVFSSMKYESGVH 180 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ ++ R HTS ++ V P + ++++++ +D + R++G+GGQ VNTTDS Sbjct: 181 RVQRVPATETQGRIHTSTITVSVMP-EAEDVDVQVNPADIEMQVMRSTGSGGQSVNTTDS 239 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+ H PTG+VV+CQQE+SQ KN+ A MLRAKLY++E ++ + + + ++G Sbjct: 240 AVRLIHHPTGIVVKCQQEKSQLKNRTMAMRMLRAKLYDIEQERIRNERD--SARRAQVGT 297 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G +IR+Y P + D R + + V+ GD++D + A Sbjct: 298 GDRSEKIRTYNF-PQDRLTDHRIGLTVHNLPGVMAGDVEDVITAC 341 >gi|294501881|ref|YP_003565581.1| peptide chain release factor 1 [Bacillus megaterium QM B1551] gi|294351818|gb|ADE72147.1| peptide chain release factor 1 [Bacillus megaterium QM B1551] Length = 355 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 108/351 (30%), Positives = 173/351 (49%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + R LN DP + N + + +E+ + ++ +E +D Sbjct: 1 MFDRLEAVEARYEKLNELLSDPEIVNNPSKLREYSKEQSDIQQTVAAYQEYKDVKEQLSE 60 Query: 72 LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + ++ D + + + + VE + + D + +EV AGG Sbjct: 61 AKTMLEDKLDADMRDMVKEEIAELETQQEELVEKLRILLIPKDPNDDKNVIMEVRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE + +KTE +E G K +I G AY +K E G Sbjct: 121 DEAALFAANLYRMYSRFAESQGWKTEVMEATTTGVGGYKEIIFMINGKGAYSKMKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ P + +E++I E D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLP-EAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PT VV CQ E+SQ KNK +A +LRA++Y+ +RE A + K +G Sbjct: 240 SAVRLTHLPTNTVVSCQDEKSQIKNKEKAMKVLRARVYDKF--QREAQAEYDATRKQAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L+G LD+ + A + + Sbjct: 298 SGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEIIDALVMEDQ 347 >gi|332663960|ref|YP_004446748.1| peptide chain release factor 1 [Haliscomenobacter hydrossis DSM 1100] gi|332332774|gb|AEE49875.1| Peptide chain release factor 1 [Haliscomenobacter hydrossis DSM 1100] Length = 358 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 104/341 (30%), Positives = 165/341 (48%), Gaps = 10/341 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72 + R L + DP + ++ K + + + L + + + Sbjct: 5 LEAIYDRYLNLEEQMSDPDIIVDMDRYKKVSKNYKDLKPIVEAFLIYRNLVGNRDSAKQA 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L E +E +I+ + +F + DS D E+ +G GG E+ Sbjct: 65 LSDEDPEMREMAQEELESLNPQIEELEDKIKFLLIPKDPEDSRDVIFEIRSGTGGDEASL 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMYTR+ E + +K A+EI++G G L I G + YG LK E G HR+ R Sbjct: 125 FAGDLYRMYTRYFESKGWKVSAMEINEGSVGGYNKLVLEINGEDVYGTLKFESGAHRVQR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS +++ V P + ++EI + D + DT+R+SGAGGQHVN T+S VR Sbjct: 185 VPKTESQGRVHTSAATVVVMP-KLEMEDLEIRKEDLKTDTFRSSGAGGQHVNKTESGVRF 243 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311 TH+PTGVV + RSQ +N+ A L K+Y E++++ + K+ +G G + Sbjct: 244 THLPTGVVSESTDGRSQIQNREIALQRLYQKIY--EMRRQAHESEQAAKRKSLVGSGDRS 301 Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P V D R N+ S VL+GDL+ ++ Sbjct: 302 DKIRTYNF-PQNRVTDHRINLTIYSLDKVLEGDLEAIIEGL 341 >gi|168177471|ref|ZP_02612135.1| peptide chain release factor 1 [Clostridium botulinum NCTC 2916] gi|226947362|ref|YP_002802453.1| peptide chain release factor 1 [Clostridium botulinum A2 str. Kyoto] gi|254790873|sp|C1FQ97|RF1_CLOBJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|182670538|gb|EDT82512.1| peptide chain release factor 1 [Clostridium botulinum NCTC 2916] gi|226843349|gb|ACO86015.1| peptide chain release factor 1 [Clostridium botulinum A2 str. Kyoto] Length = 358 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 126/347 (36%), Positives = 194/347 (55%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L+ K DP + N E + L +E L+ ++ +E + D E+ Sbjct: 5 LNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLESDKEM 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 EE D + + + ++ + L +E + L D D ++E+ AGAGG E+ Sbjct: 65 LKEESDKELREMAQEEIKELTLRLEDLERELTILLLPKDPNDDKDVFIEIRAGAGGEEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A+ LLRMYTR+AE++ +K E + ++ + G K T+ IKG AY LK E GVHR+ Sbjct: 125 LFASNLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAIKGKGAYSRLKYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S+ R HTS +++ V P D ++I I+ +D RID YRASG GGQ VNTTDSAVR Sbjct: 185 RVPDTESSGRIHTSTATVAVLP-EVDDVDININANDLRIDVYRASGHGGQCVNTTDSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV CQ E+SQ KNK +A +L+A+L+E E A+I E K+++G G Sbjct: 244 ITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAE--AERAASIAEDRKSQVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + LDGD+D+ ++A + + Sbjct: 302 SERIRTYNY-PQGRITDHRIGLTLYKLETFLDGDIDEVIEALVTEDQ 347 >gi|237744127|ref|ZP_04574608.1| peptide chain release factor 1 [Fusobacterium sp. 7_1] gi|256027764|ref|ZP_05441598.1| peptide chain release factor 1 [Fusobacterium sp. D11] gi|289765720|ref|ZP_06525098.1| bacterial Peptide Chain Release Factor 1 [Fusobacterium sp. D11] gi|229431356|gb|EEO41568.1| peptide chain release factor 1 [Fusobacterium sp. 7_1] gi|289717275|gb|EFD81287.1| bacterial Peptide Chain Release Factor 1 [Fusobacterium sp. D11] Length = 357 Score = 226 bits (577), Expect = 3e-57, Method: Composition-based stats. Identities = 121/351 (34%), Positives = 183/351 (52%), Gaps = 11/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + V R LN P + + + + + + KE + + D Sbjct: 1 MFDKLEEVVARYDELNKMLVSPEILADSKKMIECNKALNEITEIVEKYKEYKKYVDDIEF 60 Query: 72 LLELALEEDDCSILQE----TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + E E D + + + +++ E + L + D + +E+ AGAGG Sbjct: 61 IKESFKTEKDPDMKEMLNEELKEAEEKLPKLEEELKILLLPKDKNDDKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE++K+K E +E DGE GIK I G AY LK E GV Sbjct: 121 DEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELGGIKEIAFTIIGLGAYSRLKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +++ R HTS +++ V P V+D E+ + D +IDTYR+ GAGGQHVN TD Sbjct: 181 HRVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVTVDPKDLKIDTYRSGGAGGQHVNMTD 240 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VVQCQ ERSQ KN+ +A L KLYE+E +K+ + ++G Sbjct: 241 SAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQRSEVE--SERRLQVG 298 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P + D R + LDGD+D+ + A + + Sbjct: 299 TGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQ 348 >gi|260655567|ref|ZP_05861055.1| peptide chain release factor 1 [Jonquetella anthropi E3_33 E1] gi|260630015|gb|EEX48209.1| peptide chain release factor 1 [Jonquetella anthropi E3_33 E1] Length = 361 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 122/361 (33%), Positives = 184/361 (50%), Gaps = 19/361 (5%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 +++ ++L Q + K DP + NV E +L ++ L + + Sbjct: 4 VQIQKRLAE---------IEQAYREIEAKMGDPAVASNVKEMGVLGKKHADLQPVVELWQ 54 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDA 117 E + L ED + ++R++ + L D D Sbjct: 55 EYRQVEAGLAEAKSLEDSEDAEMAELAKEEAASAVKRLEEIEAELHRQLLPKDPNDEKDV 114 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 +E+ AG GG E+ +A L RMY+R+ E+ +++E +E ++ E G K +KG A Sbjct: 115 IVEIRAGTGGDEASLFAADLYRMYSRFVEREGWRSEIVEENETEVGGYKEIVFQVKGAGA 174 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 Y LK E GVHR+ R+ +++ R HTS +++ V P + +EIEI D IDTYR+SG Sbjct: 175 YSKLKFESGVHRVQRVPATEASGRIHTSAATVAVMP-QAEDVEIEIRPEDLDIDTYRSSG 233 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 AGGQHVN TDSAVRITH PTG+VV CQ ERSQ KN+A+A +LRA+LY+LELQK++ Sbjct: 234 AGGQHVNMTDSAVRITHKPTGLVVTCQDERSQIKNRAKAMMVLRARLYDLELQKKQSE-- 291 Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + + IG G +IR+Y P V D R + +LDGD+ + + A Sbjct: 292 EASTRRGMIGSGDRSERIRTYNF-PQNRVTDHRIGLTLYKLDYMLDGDIYEMIDALTMAD 350 Query: 355 K 355 + Sbjct: 351 Q 351 >gi|165975783|ref|YP_001651376.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165875884|gb|ABY68932.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 301 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 156/299 (52%), Positives = 212/299 (70%), Gaps = 1/299 (0%) Query: 55 AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114 ++ I+ + + D L+ELA+E +D E ++ ++ +F+ + SG+ D+ Sbjct: 2 VVNTIRALDQGVEDVEGLIELAVEAEDEDTFNEAQAEANELEEKLAKLEFQRMFSGQHDA 61 Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 D Y+++ AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G Sbjct: 62 ADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITG 121 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YR Sbjct: 122 EYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYR 181 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 ASGAGGQHVN T+SAVRITHIP+ +VVQCQ RSQH+NK Q L+AKLYE+E+ K+ Sbjct: 182 ASGAGGQHVNKTESAVRITHIPSSIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNA 241 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 E SK++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 242 EKQAMEESKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKFIEASLKA 299 >gi|162147177|ref|YP_001601638.1| peptide chain release factor 2 [Gluconacetobacter diazotrophicus PAl 5] gi|161785754|emb|CAP55325.1| Peptide chain release factor 2 [Gluconacetobacter diazotrophicus PAl 5] Length = 322 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 187/302 (61%), Positives = 242/302 (80%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRER L + ++ ++ + D L L+ELA E D ++L++ L+ + E + ++ E Sbjct: 1 MRERTLLAGQVEGVQRLEADVRDTLDLVELAEMEGDDAVLKDAVQMLRALAEEAKRRETE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 SLLSGEADSND YLEV+AGAGGTE+QDWA MLLRMYTRWAE+ +K +E +GE+AG+ Sbjct: 61 SLLSGEADSNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVALMESSEGEQAGL 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ + GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPVVDDSIEIEI+E Sbjct: 121 KSATIQVTGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVVDDSIEIEINE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D ++DT+RASGAGGQHVN T+SA+RITHIPTG++V CQ +RSQH+N+A A ML+A++Y Sbjct: 181 ADLKVDTFRASGAGGQHVNKTESAIRITHIPTGIIVACQTDRSQHRNRATAMTMLKARMY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E ELQ+RE A E++KT+IGWG QIRSYVL PYQ+VKDLRT++E+ +P VLDGDLDD Sbjct: 241 EQELQRREAAAAQTEAAKTDIGWGHQIRSYVLAPYQLVKDLRTSVERGNPDAVLDGDLDD 300 Query: 346 FM 347 FM Sbjct: 301 FM 302 >gi|160935042|ref|ZP_02082428.1| hypothetical protein CLOLEP_03918 [Clostridium leptum DSM 753] gi|156866495|gb|EDO59867.1| hypothetical protein CLOLEP_03918 [Clostridium leptum DSM 753] Length = 358 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 113/352 (32%), Positives = 192/352 (54%), Gaps = 13/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + ++ N K DP + + LM+E + L+ + KE + + + Sbjct: 1 MFDRLEVFEKKYEECNQKLYDPAVVSDPEAYAALMKEVKGLEPVVEKYKEYKKQKNNEEE 60 Query: 72 LLELALEEDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 +L E +E + + ++ E + L D + +E+ GAG Sbjct: 61 AKQLLAEGGLEKDFREMVELELEEARESLEKISEELKILLLPKDPNDDRNVIVEIRGGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ ++ L RMY+ +AE +++KTE L ++ E G K + +I G AY +K E G Sbjct: 121 GEEAALFSASLFRMYSMYAETKRWKTEILNANETELGGYKEISFMITGEGAYSRMKYESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ ++ R HTS ++ V P + +E+EI+ SD +IDT+R+ GAGGQH+N T Sbjct: 181 VHRVQRVPETETQGRIHTSTVTVAVLP-EAEDVEVEINPSDLKIDTFRSGGAGGQHINKT 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSA+RITH+PTG+VV+CQ ERSQ+KNK +A +L+++L E E +K++ + + K+++ Sbjct: 240 DSAIRITHLPTGLVVECQDERSQYKNKDKAMKVLKSRLLEAEREKQQNE--VAQERKSQV 297 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P + D R + DV++G+LD+ + A + + Sbjct: 298 GTGDRSERIRTYNF-PQGRLTDHRIGLTLYRLEDVMNGNLDEVIDALITADR 348 >gi|85711946|ref|ZP_01043000.1| Protein chain release factor A [Idiomarina baltica OS145] gi|85694132|gb|EAQ32076.1| Protein chain release factor A [Idiomarina baltica OS145] Length = 362 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 111/329 (33%), Positives = 176/329 (53%), Gaps = 9/329 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R + +P + + + L +E L+ +S + D E+ Sbjct: 9 LEGLIERYEEVQALLGEPDIISEQDKFRSLSKEYAQLEEVVSAFNSYRQAQSDLTAAHEM 68 Query: 76 ALEEDDCSILQETS---DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 A ++D D QR++ Q L D YLE+ AGAGG E+ Sbjct: 69 ADDDDPEMREMANEEIADAKQRVESLENSLQVLLLPKDPNDDRACYLEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE+ ++ + ++GE G K + G YG +K E G HR+ R Sbjct: 129 FAGDLFRMYSRYAEQHGWRVSTVSANEGEHGGYKEVIAQLSGDGVYGRMKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P + ++ IEI+ +D R+DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRIHTSACTVAVLPEIPEAEAIEINPADLRVDTFRASGAGGQHVNRTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+P+GVVV+CQ+ERSQHKN+A+A ++L+++L +E +KR + + ++ +G G Sbjct: 249 THLPSGVVVECQEERSQHKNRAKAMSVLQSRLQRMEDEKRAQE--EASTRRSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 +IR+Y P V D R N+ +V Sbjct: 307 ERIRTYNY-PQSRVTDHRINLTLYRLDEV 334 >gi|329929018|ref|ZP_08282820.1| peptide chain release factor 1 [Paenibacillus sp. HGF5] gi|328937007|gb|EGG33436.1| peptide chain release factor 1 [Paenibacillus sp. HGF5] Length = 355 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 107/351 (30%), Positives = 180/351 (51%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + R L+ DP + + + + +E+ L A E ++ + + Sbjct: 1 MLDRLQSLADRYEKLSELLCDPDVANDSKKLRDYSKEQSDLQPAYEAYVEYKNVIEELEA 60 Query: 72 LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + E+ D + + QR + E + L D + +E+ AGG Sbjct: 61 AKTMQGEKMDDEMREMVKMEIEELTQREQELAERIRILLLPKDPNDDKNVIIEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A+ L RMYTR+A+ + +K E ++++ + G K +I G AY +K E G Sbjct: 121 DEAALFASDLYRMYTRYADTQGWKVELMDVNTNDLGGFKEVIFMINGRGAYSKMKFESGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +S R HTS S++ V P + ++IEI + D R+DT+ +SGAGGQ VNTT Sbjct: 181 HRVQRIPTTESGGRIHTSTSTVAVMP-EAEEVDIEIHDKDIRVDTFCSSGAGGQSVNTTK 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V CQ +SQ+ NK +A +LRA+++++ Q EE A K+++G Sbjct: 240 SAVRVTHIPTGIVATCQDGKSQNSNKEKALQVLRARIFDMMRQ--EEEAKYAGERKSKVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + V++G++++ + A ++ Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTVHKLDQVMNGEIEEIVSALTLAEQ 347 >gi|32033623|ref|ZP_00133934.1| COG1186: Protein chain release factor B [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207810|ref|YP_001053035.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae L20] gi|126096602|gb|ABN73430.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 301 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 157/299 (52%), Positives = 213/299 (71%), Gaps = 1/299 (0%) Query: 55 AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114 ++ I+ + + D L+ELA+E +D E ++ ++ +F+ + SG+ D+ Sbjct: 2 VVNTIRTLDQGVEDVEGLIELAVEAEDEDTFNEAQAEANELEEKLAKLEFQRMFSGQHDA 61 Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 D Y+++ AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G Sbjct: 62 ADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITG 121 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YR Sbjct: 122 EYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYR 181 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 ASGAGGQHVN T+SAVRITHIP+G+VVQCQ RSQH+NK Q L+AKLYE+E+ K+ Sbjct: 182 ASGAGGQHVNKTESAVRITHIPSGIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNA 241 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 E SK++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 242 EKQAMEESKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKFIEASLKA 299 >gi|313500280|gb|ADR61646.1| PrfB [Pseudomonas putida BIRD-1] Length = 304 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 167/302 (55%), Positives = 219/302 (72%), Gaps = 1/302 (0%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 L + + ++ + L D LL++A+EE+D + + L+ ++ + +F + SGE Sbjct: 2 LAQVVETLDKLSNGLGDCQDLLDMAVEENDEGAVGDVVTELESLEENLAQLEFRRMFSGE 61 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F +E+ +GE AGIK AT+ Sbjct: 62 MDMNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVH 121 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 IKG A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ SD RID Sbjct: 122 IKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPSDLRID 181 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 TYR+SGAGGQHVNTTDSAVRITH+PT VV CQ ERSQH NK A MLRAKLYELE+QK Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQK 241 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R + E SK++IGWG QIRSYVL +KDLRT +E++ VLDGDLD +++A+L Sbjct: 242 RNAASQALEDSKSDIGWGHQIRSYVLDD-SRIKDLRTGVERSDCQKVLDGDLDQYLEASL 300 Query: 352 AI 353 Sbjct: 301 KQ 302 >gi|266621433|ref|ZP_06114368.1| peptide chain release factor 1 [Clostridium hathewayi DSM 13479] gi|288866872|gb|EFC99170.1| peptide chain release factor 1 [Clostridium hathewayi DSM 13479] Length = 358 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 114/351 (32%), Positives = 189/351 (53%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D+ + L + +P + ++ + LM+E+ L + E + Sbjct: 1 MFDKLDDILIHYEELMLELGNPSVTEDQNRFRRLMKEQADLAPLVETYTEYKKAKTAVED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 L + EE+D + + + L K ++E + L D + LE+ AGAGG Sbjct: 61 SLAILDEENDEEMRELAKEELSDAKKQIEALEQELKILLLPKDPNDDKNIILEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY ++E + +K E + +++ G K ++ G AY LK E GV Sbjct: 121 DEAALFAAELYRMYVNYSESQHWKVELISVNENGIGGFKEVVAMVTGKGAYSKLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +++ I + DCRID RASG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVMP-EAEDVDVVIEDKDCRIDVMRASGNGGQCVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V+ Q E+SQ +NK +A+ +LR+KLY++EL+KR+ + E +++IG Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDMELEKRQ--NSEAEERRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++GD+ + + + +A + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLYKIDSIMNGDITELLDSLIAADQ 347 >gi|218890021|ref|YP_002438885.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa LESB58] gi|218770244|emb|CAW26009.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa LESB58] Length = 303 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 168/300 (56%), Positives = 223/300 (74%), Gaps = 1/300 (0%) Query: 54 NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113 + + ++ L D+ LL++A+EEDD + + ++ ++R++ +E +F + SGE D Sbjct: 3 QVVETLDDLTSGLADSRDLLDMAVEEDDEGAVDDVANEVERLREILEKLEFRRMFSGEMD 62 Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 N+AYL++ AG+GGTE+QDWANMLLRMY RWA+K F +E+ +GE AGIK AT+ IK Sbjct: 63 PNNAYLDIQAGSGGTEAQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIKGATVHIK 122 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G A+GWL+ E GVHRLVR SP+DS +RRHTSF++++V P +DD+IEIEI+ +D RIDTY Sbjct: 123 GEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPADLRIDTY 182 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 R+SGAGGQHVNTTDSAVRITH+PT VV CQ ERSQH NK A MLRAKLYELE+QKR Sbjct: 183 RSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRT 242 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + E SK++IGWG QIRSYVL +KDLRT IE++ VLDGDLD++++A+L Sbjct: 243 AASQALEDSKSDIGWGHQIRSYVLD-QSRIKDLRTGIERSDCDKVLDGDLDEYLEASLKQ 301 >gi|49475632|ref|YP_033673.1| peptide chain release factor 2 [Bartonella henselae str. Houston-1] gi|49238439|emb|CAF27667.1| Peptide chain release factor 2 [Bartonella henselae str. Houston-1] Length = 322 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 211/309 (68%), Positives = 257/309 (83%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD++I+ I+ L + + L+ + EE D I+ + ++++ +K E++ +Q + Sbjct: 2 MRERQRLDDSINGIRSFTKTLEECIELIAMGEEESDIEIITDAENSIRNLKSEIDKRQID 61 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD ND YLEVHAGAGGTESQDWA+MLLRMY RWAE+ K K E LEIHDGEEAGI Sbjct: 62 ALLSGEADQNDTYLEVHAGAGGTESQDWASMLLRMYMRWAEQHKMKVEILEIHDGEEAGI 121 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSATLL+KG NAYG LK E GVHRLVRISP+DSN++RHTSF+SIWVYPV+DD+IE+++SE Sbjct: 122 KSATLLVKGHNAYGMLKTESGVHRLVRISPFDSNAKRHTSFASIWVYPVIDDNIEVDVSE 181 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+LY Sbjct: 182 ADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRAIAWSMLRARLY 241 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE N E+SKTEIGWG QIRSYVLQPYQ+VKDLRT +E T P VL+G+LD Sbjct: 242 EEELKKREEETNAVEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTDPQSVLNGNLDS 301 Query: 346 FMKATLAIK 354 F++A LA + Sbjct: 302 FIEAALARR 310 >gi|227486771|ref|ZP_03917087.1| peptide chain release factor RF1 [Anaerococcus lactolyticus ATCC 51172] gi|227235241|gb|EEI85256.1| peptide chain release factor RF1 [Anaerococcus lactolyticus ATCC 51172] Length = 358 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 127/351 (36%), Positives = 194/351 (55%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ ++ + L K DP + ++ + + + +E L + +EI++ Sbjct: 1 MFENLEHVRENYKQLEAKLADPAVLADMDQFRKVSKEYNSLKPVVEKYEEIKNAEDTIAE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGG 127 EL E DD ++Q D ++ K + + Q + D D +E+ GAGG Sbjct: 61 NQELINEADDQDMIQMLKDEIEENKDKLEVLKDEMQILLIPKDPNDEKDVIVEIRPGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY +A+K FKTE +E++ GIK AT +++G AY LK E GV Sbjct: 121 DEAGLFAGDLYRMYNMYADKAGFKTEEIEVNTQGVGGIKDATFVVRGEGAYSKLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P D +E+ I +D R D YR+SG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVDEVELHIDPNDIRTDVYRSSGNGGQSVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+VV Q E+SQ KNK +A +LRA+LYELE QKR + I ++ K+++G Sbjct: 240 SAVRLTHIPTGLVVAIQDEKSQIKNKEKAMRVLRARLYELEEQKRNKE--IADNRKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P + D R N D L+GD++D + + +A + Sbjct: 298 TGDRSERIRTYNF-PQGRITDHRINKTIYQLDDFLNGDIEDMINSLIAEDQ 347 >gi|238797830|ref|ZP_04641323.1| Peptide chain release factor 1 [Yersinia mollaretii ATCC 43969] gi|238718358|gb|EEQ10181.1| Peptide chain release factor 1 [Yersinia mollaretii ATCC 43969] Length = 360 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 117/337 (34%), Positives = 176/337 (52%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + + KE + D + Sbjct: 9 LEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTNCFKEWRSTQDDIEAAEMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE R + + Q L D D +LE+ AG GG E+ +A Sbjct: 69 LDDLEMREMAQEELKEAKARSEELEQQLQLLLLPKDPDDERDCFLEIRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 + RMY+R+AE R++K E + +GE G K + G A+G LK E G HR+ R+ Sbjct: 129 GDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGEGAFGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ EI+ D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR+ + +G G + Sbjct: 249 IPTGLVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQ--LAEASERRNLLGTGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ +V++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQ 342 >gi|260494288|ref|ZP_05814419.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_33] gi|260198434|gb|EEW95950.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_33] Length = 357 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 121/351 (34%), Positives = 183/351 (52%), Gaps = 11/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + V R LN P + + + + + + KE + + D Sbjct: 1 MFDKLEEVVARYDELNKMLVSPEILADSKKMIECNKALNEITEIVEKYKEYKKYVDDIEF 60 Query: 72 LLELALEEDDCSILQE----TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + E E D + + + +++ E + L + D + +E+ AGAGG Sbjct: 61 IKESFKTEKDPDMKEMLNEELKEAEEKLPKLEEELKILLLPKDKNDDKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE++K+K E +E DGE GIK I G AY LK E GV Sbjct: 121 DEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELGGIKEIAFTIIGLGAYSRLKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +++ R HTS +++ V P V+D E+ + D +IDTYR+ GAGGQHVN TD Sbjct: 181 HRVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVIVDPKDLKIDTYRSGGAGGQHVNMTD 240 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VVQCQ ERSQ KN+ +A L KLYE+E +K+ + ++G Sbjct: 241 SAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQRSEVE--SERRLQVG 298 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P + D R + LDGD+D+ + A + + Sbjct: 299 TGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQ 348 >gi|253581892|ref|ZP_04859116.1| peptide chain release factor 2 [Fusobacterium varium ATCC 27725] gi|251836241|gb|EES64778.1| peptide chain release factor 2 [Fusobacterium varium ATCC 27725] Length = 328 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 149/327 (45%), Positives = 212/327 (64%), Gaps = 1/327 (0%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 T + W + + +++E I+ K+++ + + +L++ + + Sbjct: 1 MTMEESFWNDKRSSSAVIKEMNEEKEIIAEFKKLESEVGEEEVLIDFVEMGETDFQAELE 60 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++ K LL GE DSN+A + +H+GAGGTE+ DWA+ML RMY+RW ++ Sbjct: 61 EKHMILGKDIDH-FDTRLLLDGEFDSNNAIVTIHSGAGGTEACDWADMLYRMYSRWCNEK 119 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 K+K ++ G+ GIKS T L++G NAYG++K E+G+HRLVRISP+D+N +RHTSF+S Sbjct: 120 KYKISEMDFMPGDSVGIKSITFLVEGSNAYGYMKSEKGIHRLVRISPFDANKKRHTSFAS 179 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P VD+S+E+ + D RIDTYRASGAGGQHVN TDSAVRITHIPTG+VV CQ+ERS Sbjct: 180 VEVMPEVDESVEVNVDAGDLRIDTYRASGAGGQHVNMTDSAVRITHIPTGIVVTCQRERS 239 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q N+ A ML++KL ELE++K+EE + ++EIGWG QIRSYV QPY +VKD RT Sbjct: 240 QLNNRETAMKMLKSKLIELEMKKKEEELKKIQGEQSEIGWGNQIRSYVFQPYTLVKDHRT 299 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIKK 355 E + V+DGD+D F+ L K Sbjct: 300 AAESGNIKAVMDGDIDIFINTYLRWNK 326 >gi|325294472|ref|YP_004280986.1| peptide chain release factor 1 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064920|gb|ADY72927.1| Peptide chain release factor 1 [Desulfurobacterium thermolithotrophum DSM 11699] Length = 361 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 118/347 (34%), Positives = 184/347 (53%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V++ + P + + + + L +E + L E + +E+ Sbjct: 9 LDRIVEKFKEIEESLGKPEIIADQKKFQALAKEHKELQPIYETYMEYKKTKQGIEEAIEI 68 Query: 76 ALEEDDCS----ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ++ +E + +R++ + + D + LE+ AG GG E+ Sbjct: 69 IESANEDELIELAKEEKKELEERLEQLEAELKKLLIPKDPNDEKNVILEIRAGTGGEEAA 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYTR+AEK+ +K E L +++ GIK I G AY LK E GVHR+ Sbjct: 129 LFAQDLFRMYTRYAEKKGWKVEILSLNETGLGGIKEVIATISGKGAYSRLKYESGVHRVQ 188 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ + P + ++I I E D +IDTYR+SGAGGQHVNTTDSAVR Sbjct: 189 RIPVTESGGRIHTSAATVAILP-EAEEVDIHIDEKDLKIDTYRSSGAGGQHVNTTDSAVR 247 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIPTG+VV C ERSQ +N+ +A +LRA+L EL +R++ + + +++IG G Sbjct: 248 ITHIPTGIVVTCSNERSQIQNRIKAMKILRARLKELY--ERQQKEQLDSARRSQIGSGDR 305 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + + + LDG+LD+ + A A ++ Sbjct: 306 SEKIRTYNF-PENRVTDHRIKLTLYNLEEFLDGELDEMIDALTAAEQ 351 >gi|77164037|ref|YP_342562.1| peptide chain release factor 1 [Nitrosococcus oceani ATCC 19707] gi|254436043|ref|ZP_05049550.1| peptide chain release factor 1 [Nitrosococcus oceani AFC27] gi|119361569|sp|Q3JDR4|RF1_NITOC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|76882351|gb|ABA57032.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrosococcus oceani ATCC 19707] gi|207089154|gb|EDZ66426.1| peptide chain release factor 1 [Nitrosococcus oceani AFC27] Length = 360 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 117/346 (33%), Positives = 185/346 (53%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---LCDNLIL 72 + +R L +P + + + L +E L+ I ++ + L ++ L Sbjct: 9 LETLAERQQELTALLAEPEIASAQKKFRELSQEYAQLEPVIGCFRDFEQAQSVLNESKAL 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L+ E +E + ++++ L S D + +LE+ AG GG E+ Sbjct: 69 LQDQDPELRVLAQEEIAAAEKKLERLDRELHTLLLPSDPNDKRNIFLEIRAGTGGDEAAL 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A+ LLRMY R+AE+R ++TE + GE G K + I G AY LK E G HR+ R Sbjct: 129 FASDLLRMYLRYAEQRGWRTEIMGDSPGEHGGHKEIIVRIVGAGAYSRLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ + P ++ +I+I+ +D R+DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPQTESQGRIHTSACTVAIMPEAEEIDDIDINPADLRVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+ +G+VV+CQ ERSQHKN+A+A ++LR KL E K +A + ++ IG G Sbjct: 249 THLASGIVVECQDERSQHKNRARAMSLLRTKLKSEEEAKL--VAEETATRRSLIGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ ++L G+LD + +A + Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYKLDEILQGNLDAIIDPLVAEHQ 351 >gi|294624919|ref|ZP_06703574.1| peptide chain release factor 2 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666711|ref|ZP_06731947.1| peptide chain release factor 2 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292600798|gb|EFF44880.1| peptide chain release factor 2 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603536|gb|EFF46951.1| peptide chain release factor 2 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 313 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 166/302 (54%), Positives = 216/302 (71%), Gaps = 1/302 (0%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 L+ + I ++ L D LLELA E D +L + VE +F+ + SG+ Sbjct: 2 LEKTVIGIADVLSGLADAGDLLELAESEQDEDTAVAVIADLDNYQAHVEKLEFQRMFSGQ 61 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 DS +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE +E+ GE AGIKSAT+ Sbjct: 62 MDSANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTELMEVSGGEVAGIKSATVR 121 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I+G AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P VDD+IEI+I+ +D R D Sbjct: 122 IEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDNIEIDINPADLRTD 181 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 YR+SGAGGQHVN T+SAVRITHIPT VV CQ RSQH+N+ A ML AKLYELE+QK Sbjct: 182 VYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRDNAMKMLAAKLYELEVQK 241 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R + E++K++IGWG QIR+YVL +KDLRT IE++ VLDGDLD+F++A+L Sbjct: 242 RNAEKDALEATKSDIGWGSQIRNYVLD-QSRIKDLRTGIERSDTQKVLDGDLDEFVEASL 300 Query: 352 AI 353 Sbjct: 301 KA 302 >gi|332800047|ref|YP_004461546.1| peptide chain release factor 1 [Tepidanaerobacter sp. Re1] gi|332697782|gb|AEE92239.1| Peptide chain release factor 1 [Tepidanaerobacter sp. Re1] Length = 356 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 125/348 (35%), Positives = 187/348 (53%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72 + ++ L K DP + E L +E L+ ++ +E + +L +N L Sbjct: 5 LEIIEKKYDELTKKIADPEIIARQEEWIGLTKEHASLEEIVTNFREYKEVLKQLEENSEL 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQF--ESLLSGEADSNDAYLEVHAGAGGTES 130 LE A + + L ++ K +Q L D + +E+ AG GG E+ Sbjct: 65 LEDAAGDIEMEQLIKSELEALEEKKSKLQEQLRILLLPQDPNDDRNVIMEIRAGTGGDEA 124 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY+R+AEK+ +K E ++ + E G K I G AY LK E GVHR+ Sbjct: 125 ALFAGDLFRMYSRYAEKQGWKVEIIDSNPTELGGFKEVIFEINGKGAYSRLKYESGVHRV 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P ++IEI+ D RID YRASG GGQ VNTTDSAV Sbjct: 185 QRVPSTEAGGRIHTSAATVAVLP-EAHEVDIEINPDDLRIDIYRASGHGGQGVNTTDSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG+VV CQ ERSQ KNK +A +LRA+L LE + E+ I ++ ++++G G Sbjct: 244 RITHIPTGLVVTCQDERSQLKNKDKAMKVLRARL--LEKVQEEQEREIAQNRRSQVGSGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ ++VL G+LD+ + A +A + Sbjct: 302 RSERIRTYNF-PQGRITDHRINLTTHQLTNVLQGELDELIDALVAEDQ 348 >gi|300770142|ref|ZP_07080021.1| peptide chain release factor RF1 [Sphingobacterium spiritivorum ATCC 33861] gi|300762618|gb|EFK59435.1| peptide chain release factor RF1 [Sphingobacterium spiritivorum ATCC 33861] Length = 364 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 98/346 (28%), Positives = 173/346 (50%), Gaps = 12/346 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D +R + + +P ++ L +E + L + ++ + + Sbjct: 8 MLDKLQAIKERWQEVEAELSNPDTISDMKRFAKLNKEYKDLSKIVDQYHIYKNMVSNIDA 67 Query: 72 LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 ++ E D + + + + + + E + + D+ +A +E+ G GG Sbjct: 68 NKDILANEKDQELREMAKEELDILYGQKEEKEEEIRLMLIPKDPEDAKNAIIEIRGGTGG 127 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR+ E + ++ E +++ +G G K L + G + YG LK E GV Sbjct: 128 DEAALFAGDLYRMYTRFFETKGWRNEVMDVTEGTSGGYKEVILKVIGEDVYGQLKYESGV 187 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS +S+ V P + +++E++ D + T R+ GAGGQ+VN + Sbjct: 188 HRVQRVPDTETQGRVHTSAASVAVLP-EAEDVDVELNPGDIEMQTSRSGGAGGQNVNKVE 246 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 + V++TH P+G+VV CQ ERSQ N+ A MLR KLYELE+QK+ +I KT + Sbjct: 247 TKVQLTHKPSGIVVVCQVERSQLANRELAMEMLRNKLYELEVQKK--HGDIAAKRKTMVS 304 Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G + +R+Y P V + R + + V+DGD+ + A Sbjct: 305 TGDRSAKVRTYNY-PQGRVTEHRIGLTLYNLPAVMDGDIQGIIDAL 349 >gi|297585440|ref|YP_003701220.1| peptide chain release factor 1 [Bacillus selenitireducens MLS10] gi|297143897|gb|ADI00655.1| peptide chain release factor 1 [Bacillus selenitireducens MLS10] Length = 356 Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats. Identities = 114/351 (32%), Positives = 186/351 (52%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68 +FD ++ R LN DP + + + + +E+ L + ++ +D ++ D Sbjct: 1 MFDRLESVENRYEQLNELLMDPAVMNDTDKLRDYSKEQSGLQETVEAYRQYKDIKSQVED 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127 +L L+++ + + D L+ E+E K + + D + +EV AGG Sbjct: 61 TKEMLRDHLDDEMREMAKMELDELETELGELEEKLRVLLIPKDPNDDKNVIVEVRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY R+AE + +KT+ +E + G K I G AY +K E G Sbjct: 121 DEAALFAGDLYRMYHRYAESQGWKTDVIEASETGIGGYKEIVFTINGTGAYSKMKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +E++ISE D R+D + +SG GGQ VNTT Sbjct: 181 HRVQRVPATESGGRIHTSTATVAVLP-EAEDVEVDISEKDIRVDRFASSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+VV CQ E+SQ KNK +A +LRA++Y+ +RE A E+ K+ +G Sbjct: 240 SAVRLTHEPTGIVVSCQDEKSQIKNKEKAMKVLRARIYDKY--QREAQAEYDENRKSAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L+G LD+ ++A + ++ Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTIQKLDQILEGKLDEIIEALIVEEQ 347 >gi|212636630|ref|YP_002313155.1| peptide chain release factor 1 [Shewanella piezotolerans WP3] gi|226739120|sp|B8CQV2|RF1_SHEPW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|212558114|gb|ACJ30568.1| Peptide chain release factor 1 [Shewanella piezotolerans WP3] Length = 361 Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats. Identities = 111/342 (32%), Positives = 182/342 (53%), Gaps = 9/342 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R + D + + + L +E L++ + K Q D E+ Sbjct: 9 LEGLLERNEEVLALLSDAGIIADQERFRALSKEYSQLEDVVKAFKSFQQAEEDLESAKEM 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + + I+ Q L D N+ ++E+ AGAGG E+ Sbjct: 69 MEEDDAELKEMAQEEYKAAKETIETLESELQILLLPKDPNDDNNCFIEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AE +++ E + ++GE G K I G YG LK E G HR+ R Sbjct: 129 FAGDLFRMYSKYAESNRWQIEVMNTNEGEHGGFKEVIAKISGEGVYGKLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P + ++ IEI+++D ++DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRVHTSACTVIVLPEIPEAEAIEINKADLKVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV+CQ +RSQHKN+AQA ++L A++ +E +KR + + + + G Sbjct: 249 THIPTGIVVECQDQRSQHKNRAQAMSVLSARIQAVEDEKRRSEED--STRRNLVSSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V + R N+ + ++GD+D ++ + Sbjct: 307 ERIRTYNF-PQGRVSEHRINLTLYRLGEFMEGDIDVVIEPLI 347 >gi|283850912|ref|ZP_06368198.1| peptide chain release factor 1 [Desulfovibrio sp. FW1012B] gi|283573835|gb|EFC21809.1| peptide chain release factor 1 [Desulfovibrio sp. FW1012B] Length = 357 Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats. Identities = 108/350 (30%), Positives = 177/350 (50%), Gaps = 11/350 (3%) Query: 13 LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F ++ ++ L + DP + + + L + + + ++ +E + D Sbjct: 1 MFAKLESLERKYVELEKQLSDPSVVNDQERYRKLTKAHADMADMMAAFREHKQLSRDLEE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 E+A + D ++ + + L D + LE+ AG GG Sbjct: 61 NQEMAQDPDPEMRELALAEIKAIKEALPEIEARLKLLLLPKDPMDDKNILLEIRAGTGGE 120 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMY R+AE R++K E + + G K I G Y LK E G H Sbjct: 121 EAALFAGDLFRMYCRYAEARRWKVELMSQSETGSGGYKEVIASIAGDKVYSRLKYESGAH 180 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS ++ + P + +++ I +D RID YR+SG GGQ VNTTDS Sbjct: 181 RVQRVPATESQGRIHTSAVTVAIMP-EAEEVDVAIDPNDLRIDVYRSSGPGGQSVNTTDS 239 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+TH+P+G+VV CQ E+SQHKNKA+A +LR++L ++E +K+ + ++++G Sbjct: 240 AVRVTHVPSGLVVICQDEKSQHKNKAKALKVLRSRLLQIEQEKQRLEQE--ATRRSQVGT 297 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R N+ VL+GDLD+ + +A + Sbjct: 298 GDRSERIRTYNF-PQSRVTDHRINLTLYRLEAVLEGDLDELCEGLIAHYQ 346 >gi|226946181|ref|YP_002801254.1| peptide chain release factor 1 [Azotobacter vinelandii DJ] gi|259585215|sp|C1DEV0|RF1_AZOVD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|226721108|gb|ACO80279.1| peptide chain release factor 1 [Azotobacter vinelandii DJ] Length = 360 Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats. Identities = 113/346 (32%), Positives = 176/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + +E ++ ++ +E + D L Sbjct: 9 LDLLHDRYEELTALLGDAEVIAEQGRFRAYSKEYAEVEPVVAAYREFRKVRDDLAGAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLE---VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + + + Q L D+ + +LE+ AG GG E+ Sbjct: 69 LKDSDPDLREMAAEEVAEARERLAGLEDRLQRMLLPRDPNDARNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AEK+ ++ E L + GE G K ++G N YG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAEKQGWRIEILSENPGEHGGYKEIITRVEGDNVYGKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI+ ++ R+DTYR+SGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQAAIEINPAELRVDTYRSSGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ+ERSQHKN+A+A L AKL + Q I E+ + +G G Sbjct: 249 THLPTGIVVECQEERSQHKNRAKAMAWLAAKLQD--RQDAAAHREISETRRLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V + R N+ + +V+ G ++ ++ L+ + Sbjct: 307 ERIRTYNF-PQGRVTEHRINLTLYALDEVMAGGVEAVIEPLLSEYQ 351 >gi|256545370|ref|ZP_05472733.1| peptide chain release factor 1 [Anaerococcus vaginalis ATCC 51170] gi|256398931|gb|EEU12545.1| peptide chain release factor 1 [Anaerococcus vaginalis ATCC 51170] Length = 357 Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats. Identities = 122/348 (35%), Positives = 191/348 (54%), Gaps = 11/348 (3%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + ++ + L K DP + + K + RE L + +I+ E Sbjct: 4 NLEHMRENFKELEKKLADPEVLSDTERFKKVSREYNQLKPIVEKYNQIRSAEDMINENTE 63 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTES 130 L E DD ++ + K +E + + + D D +E+ AGAGG E+ Sbjct: 64 LLKEADDKEMIDLLKSEIDENKKNLEKYNEDLKVLLIPTDPNDHKDVIVEIRAGAGGEEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY +A+K+K+KTE +++ G+K AT +++G AY LK E GVHR+ Sbjct: 124 GLFAGNLYRMYHMYADKQKYKTEDIDVSSQGIGGMKEATFIVRGEGAYSKLKYESGVHRV 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P D ++I+I +D R D YR+SG GGQ VNTTDSAV Sbjct: 184 QRVPETESGGRIHTSTATVAVLP-EADEVDIKIDPNDIRTDVYRSSGNGGQSVNTTDSAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+THIPTG+VV CQ E+SQ KNK +A +LRA+LYE+E QKR++ I ++ K+++G G Sbjct: 243 RLTHIPTGLVVTCQDEKSQIKNKDKAMRVLRARLYEIEEQKRQKE--ISDNRKSQVGTGD 300 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N D LDG++++ +++ + + Sbjct: 301 RSERIRTYNY-PQGRITDHRINKTIYQLDDFLDGNIEEMIESLITEDQ 347 >gi|293395774|ref|ZP_06640056.1| peptide chain release factor RF1 [Serratia odorifera DSM 4582] gi|291421711|gb|EFE94958.1| peptide chain release factor RF1 [Serratia odorifera DSM 4582] Length = 361 Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 112/337 (33%), Positives = 174/337 (51%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + E + D + Sbjct: 9 LEALQERHEEVQALLGDAGVIADQDRFRALSREYAQLTDVSRCFLEWRQVQDDVATAEMM 68 Query: 76 ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E + + + Q L D +LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQEELKQARETTETLEQQLQLLLLPKDPDDERSCFLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + ++GE G K + G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRVEVMSANEGEHGGYKEVIAKVSGDGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P V ++ EI+ D +IDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVMPEVPEAELPEINAGDLKIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ +V++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQ 342 >gi|260598215|ref|YP_003210786.1| peptide chain release factor 1 [Cronobacter turicensis z3032] gi|260217392|emb|CBA31449.1| Peptide chain release factor 1 [Cronobacter turicensis z3032] Length = 360 Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 113/344 (32%), Positives = 176/344 (51%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + E + D + Sbjct: 9 LEALQERHEEVQALLGDAGTLADQERFRALSREYAQLSDVSRCFLEWRQVQEDMETARLM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ + + + Q L D +AY+EV AG GG E+ +A Sbjct: 69 LSDPEMRDMAQDELLEAKAKGEALEQELQLLLLPKDPDDERNAYVEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESRRWRVEIMSASEGEHGGYKEVIAKISGEGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A +L A+++ E KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALAVLGARIHAAEAAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R+Y P V D R N+ +V++G LD ++ + + Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDALIEPIIQEHQ 349 >gi|255533998|ref|YP_003094370.1| peptide chain release factor 1 [Pedobacter heparinus DSM 2366] gi|255346982|gb|ACU06308.1| peptide chain release factor 1 [Pedobacter heparinus DSM 2366] Length = 357 Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 102/342 (29%), Positives = 176/342 (51%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R + + +P Q++ L +E + L + K ++ + + E+ Sbjct: 5 LEAIKLRWEDVEEQLSNPDTMQDMKRFAALNKEYKDLGKIVDEYKVYKNVMSNIEANKEI 64 Query: 76 ALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + L + + E + + D+ +A E+ G GG E+ Sbjct: 65 LSTEKDAEMREMAKEELDLLLVQQEELEEKVRLMLIPVDPEDAKNAVFEIRGGTGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+ E++ +K E +++ +G G K L + G + YG LK E GVHR+ Sbjct: 125 LFAGDLYRMYSRFFEQKGWKVETVDVTEGTAGGYKEVILKVSGEDVYGQLKYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +S+ V P + I++ I+ +D + T R+ GAGGQ+VN ++ V+ Sbjct: 185 RVPDTETQGRVHTSAASVAVLP-EAEEIDLYINPADIDLQTSRSGGAGGQNVNKVETKVQ 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +TH P+G+VV CQQERSQ N+ A MLR+KLY++ELQK+ +I KT + G + Sbjct: 244 LTHRPSGIVVVCQQERSQLGNRVIAMEMLRSKLYDIELQKKN--GDIAARRKTMVSTGDR 301 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P V D R + + + ++DG + + + A Sbjct: 302 SAKIRTYNY-PQGRVTDHRIGLTLYNLNSIMDGGVQELIDAL 342 >gi|188534015|ref|YP_001907812.1| peptide chain release factor 1 [Erwinia tasmaniensis Et1/99] gi|238689693|sp|B2VEH7|RF1_ERWT9 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|188029057|emb|CAO96925.1| Peptide chain release factor 1 (RF-1) [Erwinia tasmaniensis Et1/99] Length = 360 Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 111/337 (32%), Positives = 175/337 (51%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + ++ Q D + Sbjct: 9 LEALQERHEEVEAMLGDAGVIADQERFRALSREYAQLTDVSQCFRQWQQSQEDIETAEMM 68 Query: 76 ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E + + Q L D + YLEV AG GG E+ +A Sbjct: 69 LSDAEMRDMAQEELQTARAASEELEQQLQVLLLPKDPDDERNCYLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R++K E + ++GE G K + G AYG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESRRWKVEVMSANEGEHGGYKEVIAKVVGEGAYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ +I+ SD +IDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A +L +++ E+ +R++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARRQQE--ESSTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ + ++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTIYRLDEAMEGKLDALIE 342 >gi|215486443|ref|YP_002328874.1| peptide chain release factor 1 [Escherichia coli O127:H6 str. E2348/69] gi|312966451|ref|ZP_07780673.1| peptide chain release factor 1 [Escherichia coli 2362-75] gi|254790880|sp|B7UQ99|RF1_ECO27 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|215264515|emb|CAS08882.1| peptide chain release factor RF-1 [Escherichia coli O127:H6 str. E2348/69] gi|312288904|gb|EFR16802.1| peptide chain release factor 1 [Escherichia coli 2362-75] Length = 360 Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 114/344 (33%), Positives = 179/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ + ++E + L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQDELREAKEKSEQLEQQLHVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + D+ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R+Y P V D R N+ +V++G LD ++ + + Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 349 >gi|330817652|ref|YP_004361357.1| peptide chain release factor 2 [Burkholderia gladioli BSR3] gi|327370045|gb|AEA61401.1| peptide chain release factor 2 [Burkholderia gladioli BSR3] Length = 299 Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 161/296 (54%), Positives = 216/296 (72%), Gaps = 1/296 (0%) Query: 58 FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117 + + L D L ELA EE+D L + ++ V +F + S AD N+ Sbjct: 3 TLTTLDGDLRDAQDLFELAREENDEDTLLASEGEAAELEKRVAEIEFRRMFSNPADPNNC 62 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FKTE LE DG+ AGIK+AT+ + G A Sbjct: 63 FIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKTEVLEESDGDVAGIKNATIKVTGDYA 122 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 YG+L+ E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+E++ +D RIDTYRASG Sbjct: 123 YGFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPADLRIDTYRASG 182 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 AGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE E++KR+ + Sbjct: 183 AGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEMRKRQAEQD 242 Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 ESSKT++GWG QIRSYVL VKDLRTN+E ++ VLDGDLDDF+ A+L Sbjct: 243 KLESSKTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTRAVLDGDLDDFIGASLKQ 297 >gi|238788553|ref|ZP_04632346.1| Peptide chain release factor 1 [Yersinia frederiksenii ATCC 33641] gi|238723466|gb|EEQ15113.1| Peptide chain release factor 1 [Yersinia frederiksenii ATCC 33641] Length = 360 Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 116/337 (34%), Positives = 174/337 (51%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + KE + D + Sbjct: 9 LEALQERHEEVLAHLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSVQDDLDAAEMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE R + + Q L D D +LE+ AG GG E+ +A Sbjct: 69 LEDPEMREMAQEELKEAKARSEELEQQLQLLLLPKDPDDERDCFLEIRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 + RMY+R+AE R++K E + +GE G K + G +G LK E G HR+ R+ Sbjct: 129 GDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGDGVFGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ EI+ D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR+ + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQ--LAEASERRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ +V++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQ 342 >gi|229014499|ref|ZP_04171617.1| Peptide chain release factor 1 [Bacillus mycoides DSM 2048] gi|229136148|ref|ZP_04264901.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST196] gi|229170037|ref|ZP_04297729.1| Peptide chain release factor 1 [Bacillus cereus AH621] gi|228613462|gb|EEK70595.1| Peptide chain release factor 1 [Bacillus cereus AH621] gi|228647307|gb|EEL03389.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST196] gi|228746849|gb|EEL96734.1| Peptide chain release factor 1 [Bacillus mycoides DSM 2048] Length = 358 Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 119/352 (33%), Positives = 183/352 (51%), Gaps = 12/352 (3%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLC 67 G+ D R LN DP + + + + +E+ + + + +E +D +L Sbjct: 3 GVLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDIQDTVEVYREYKDVREQLR 62 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAG 126 D +LE L+ D +++E L+ + + + + + D + +EV AG Sbjct: 63 DAKAMLEDKLDADMRDMVKEEVSELEGQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAG 122 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L RMY+R+AE + +KTE +E E G K +I G A+ LK E G Sbjct: 123 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 182 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P + +EI I E D R+DT+ +SG GGQ VNTT Sbjct: 183 AHRVQRVPETESGGRIHTSTATVAVLP-EAEEVEINIHEKDVRVDTFASSGPGGQSVNTT 241 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K + Sbjct: 242 MSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAV 299 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R + +L G LDDF+ A + + Sbjct: 300 GTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350 >gi|156933676|ref|YP_001437592.1| peptide chain release factor 1 [Cronobacter sakazakii ATCC BAA-894] gi|166223556|sp|A7MKC1|RF1_ENTS8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|156531930|gb|ABU76756.1| hypothetical protein ESA_01498 [Cronobacter sakazakii ATCC BAA-894] Length = 360 Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 112/344 (32%), Positives = 177/344 (51%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + E + D + Sbjct: 9 LEALQERHEEVQALLGDAGTLADQERFRALSREYAQLSDVSRCFLEWRQVQEDMETARLM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ + + + Q L D +A++EV AG GG E+ +A Sbjct: 69 LSDPEMRDMAQDELLEAKAKSEALEQELQLLLLPKDPDDERNAFVEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESRRWRVEIMSASEGEHGGYKEVIAKISGEGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A +L A+++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALAVLGARIHAAEVAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R+Y P V D R N+ +V++G LD ++ + + Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDALIEPIIQEHQ 349 >gi|167625123|ref|YP_001675417.1| peptide chain release factor 1 [Shewanella halifaxensis HAW-EB4] gi|189039991|sp|B0TR27|RF1_SHEHH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|167355145|gb|ABZ77758.1| peptide chain release factor 1 [Shewanella halifaxensis HAW-EB4] Length = 361 Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 112/346 (32%), Positives = 182/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R + D + + + L +E L++ + K Q D E+ Sbjct: 9 LEGLLERNEEVLALLSDASIIADQERFRALSKEYSQLEDVVRTFKSYQQAEEDFESAKEM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + + Q L D N+ ++E+ AGAGG E+ Sbjct: 69 MEEDDPELKEMAQEEYKATKEAIATLEAELQILLLPKDPNDDNNCFIEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE ++++ E + ++GE G K I G YG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAESKRWQIEVMNTNEGEHGGFKEVIAKISGEGVYGKLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P V ++ IEI+++D ++DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRVHTSACTVIVLPEVPEAEAIEINKADLKVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV+CQ +RSQHKN+AQA ++L A++ +E +KR + + + G Sbjct: 249 THIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEE--STRRNLVSSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V + R N+ ++ ++GD+D ++ + + Sbjct: 307 ERIRTYNY-PQGRVSEHRINLTLYRLNEFMEGDIDCVVEPLIQENQ 351 >gi|15608439|ref|NP_215815.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Rv] gi|15840749|ref|NP_335786.1| peptide chain release factor 1 [Mycobacterium tuberculosis CDC1551] gi|31792492|ref|NP_854985.1| peptide chain release factor 1 [Mycobacterium bovis AF2122/97] gi|121637228|ref|YP_977451.1| peptide chain release factor 1 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148661087|ref|YP_001282610.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Ra] gi|148822517|ref|YP_001287271.1| peptide chain release factor 1 [Mycobacterium tuberculosis F11] gi|167969626|ref|ZP_02551903.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Ra] gi|215403141|ref|ZP_03415322.1| peptide chain release factor 1 [Mycobacterium tuberculosis 02_1987] gi|215410938|ref|ZP_03419746.1| peptide chain release factor 1 [Mycobacterium tuberculosis 94_M4241A] gi|215426621|ref|ZP_03424540.1| peptide chain release factor 1 [Mycobacterium tuberculosis T92] gi|215430186|ref|ZP_03428105.1| peptide chain release factor 1 [Mycobacterium tuberculosis EAS054] gi|215445477|ref|ZP_03432229.1| peptide chain release factor 1 [Mycobacterium tuberculosis T85] gi|218753007|ref|ZP_03531803.1| peptide chain release factor 1 [Mycobacterium tuberculosis GM 1503] gi|219557200|ref|ZP_03536276.1| peptide chain release factor 1 [Mycobacterium tuberculosis T17] gi|224989703|ref|YP_002644390.1| peptide chain release factor 1 [Mycobacterium bovis BCG str. Tokyo 172] gi|253799655|ref|YP_003032656.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN 1435] gi|254231557|ref|ZP_04924884.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis C] gi|254364196|ref|ZP_04980242.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis str. Haarlem] gi|254550307|ref|ZP_05140754.1| peptide chain release factor 1 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260186238|ref|ZP_05763712.1| peptide chain release factor 1 [Mycobacterium tuberculosis CPHL_A] gi|260200352|ref|ZP_05767843.1| peptide chain release factor 1 [Mycobacterium tuberculosis T46] gi|260204557|ref|ZP_05772048.1| peptide chain release factor 1 [Mycobacterium tuberculosis K85] gi|289442738|ref|ZP_06432482.1| peptide chain release factor 1 [Mycobacterium tuberculosis T46] gi|289446894|ref|ZP_06436638.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis CPHL_A] gi|289554911|ref|ZP_06444121.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN 605] gi|289569311|ref|ZP_06449538.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis T17] gi|289573962|ref|ZP_06454189.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis K85] gi|289745045|ref|ZP_06504423.1| peptide chain release factor 1 [Mycobacterium tuberculosis 02_1987] gi|289749853|ref|ZP_06509231.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis T92] gi|289753376|ref|ZP_06512754.1| peptide chain release factor 1 [Mycobacterium tuberculosis EAS054] gi|289757399|ref|ZP_06516777.1| peptide chain release factor 1 [Mycobacterium tuberculosis T85] gi|289761454|ref|ZP_06520832.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis GM 1503] gi|297633851|ref|ZP_06951631.1| peptide chain release factor 1 [Mycobacterium tuberculosis KZN 4207] gi|297730838|ref|ZP_06959956.1| peptide chain release factor 1 [Mycobacterium tuberculosis KZN R506] gi|298524803|ref|ZP_07012212.1| peptide chain release factor 1 [Mycobacterium tuberculosis 94_M4241A] gi|306775471|ref|ZP_07413808.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu001] gi|306781618|ref|ZP_07419955.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu002] gi|306784023|ref|ZP_07422345.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu003] gi|306788386|ref|ZP_07426708.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu004] gi|306792713|ref|ZP_07431015.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu005] gi|306797119|ref|ZP_07435421.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu006] gi|306802999|ref|ZP_07439667.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu008] gi|306807189|ref|ZP_07443857.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu007] gi|306967388|ref|ZP_07480049.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu009] gi|306971580|ref|ZP_07484241.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu010] gi|307079294|ref|ZP_07488464.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu011] gi|307083863|ref|ZP_07492976.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu012] gi|313658170|ref|ZP_07815050.1| peptide chain release factor 1 [Mycobacterium tuberculosis KZN V2475] gi|54039048|sp|P66017|RF1_MYCBO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|54041593|sp|P66016|RF1_MYCTU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223571|sp|A1KI87|RF1_MYCBP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223574|sp|A5U1Z8|RF1_MYCTA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790891|sp|C1AMU3|RF1_MYCBT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|1322423|emb|CAA97732.1| PROBABLE PEPTIDE CHAIN RELEASE FACTOR 1 PRFA (RF-1) [Mycobacterium tuberculosis H37Rv] gi|13880941|gb|AAK45600.1| peptide chain release factor 1 [Mycobacterium tuberculosis CDC1551] gi|31618081|emb|CAD94192.1| PROBABLE PEPTIDE CHAIN RELEASE FACTOR 1 PRFA (RF-1) [Mycobacterium bovis AF2122/97] gi|121492875|emb|CAL71346.1| Probable peptide chain release factor 1 prfA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124600616|gb|EAY59626.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis C] gi|134149710|gb|EBA41755.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis str. Haarlem] gi|148505239|gb|ABQ73048.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Ra] gi|148721044|gb|ABR05669.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis F11] gi|224772816|dbj|BAH25622.1| peptide chain release factor 1 [Mycobacterium bovis BCG str. Tokyo 172] gi|253321158|gb|ACT25761.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN 1435] gi|289415657|gb|EFD12897.1| peptide chain release factor 1 [Mycobacterium tuberculosis T46] gi|289419852|gb|EFD17053.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis CPHL_A] gi|289439543|gb|EFD22036.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN 605] gi|289538393|gb|EFD42971.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis K85] gi|289543065|gb|EFD46713.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis T17] gi|289685573|gb|EFD53061.1| peptide chain release factor 1 [Mycobacterium tuberculosis 02_1987] gi|289690440|gb|EFD57869.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis T92] gi|289693963|gb|EFD61392.1| peptide chain release factor 1 [Mycobacterium tuberculosis EAS054] gi|289708960|gb|EFD72976.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis GM 1503] gi|289712963|gb|EFD76975.1| peptide chain release factor 1 [Mycobacterium tuberculosis T85] gi|298494597|gb|EFI29891.1| peptide chain release factor 1 [Mycobacterium tuberculosis 94_M4241A] gi|308216019|gb|EFO75418.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu001] gi|308325580|gb|EFP14431.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu002] gi|308331256|gb|EFP20107.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu003] gi|308335072|gb|EFP23923.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu004] gi|308338880|gb|EFP27731.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu005] gi|308342494|gb|EFP31345.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu006] gi|308346428|gb|EFP35279.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu007] gi|308350299|gb|EFP39150.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu008] gi|308355000|gb|EFP43851.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu009] gi|308358948|gb|EFP47799.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu010] gi|308362830|gb|EFP51681.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu011] gi|308366496|gb|EFP55347.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis SUMu012] gi|323720256|gb|EGB29355.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis CDC1551A] gi|326902921|gb|EGE49854.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis W-148] gi|328459401|gb|AEB04824.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN 4207] Length = 357 Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 113/346 (32%), Positives = 167/346 (48%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + + L DP L N EA+ + R L ++ +++ D EL Sbjct: 8 IDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDDLETAREL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 ++ + + D++D LEV +G GG ES +A Sbjct: 68 VASDESFAAEVAALEARVGELDAQLTDML--APRDPHDADDIVLEVKSGEGGEESALFAA 125 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190 L RMY R+AE+ + L+ + G K ATL I + +K E GVHR+ Sbjct: 126 DLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEGGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS + + VYP ++ +++I ESD RID +R+SG GGQ VNTTDSAV Sbjct: 186 QRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG+VV CQ ERSQ +NK +A +L A+L + ++ A+ +S+ + Sbjct: 246 RITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRTVDRS 305 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + + VLDGDLD A A K Sbjct: 306 ERIRTYNF-PENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADK 350 >gi|229064980|ref|ZP_04200278.1| Peptide chain release factor 1 [Bacillus cereus AH603] gi|228716281|gb|EEL67993.1| Peptide chain release factor 1 [Bacillus cereus AH603] Length = 358 Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 119/352 (33%), Positives = 183/352 (51%), Gaps = 12/352 (3%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLC 67 G+ D R LN DP + + + + +E+ + + + +E +D +L Sbjct: 3 GVLDRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQDTVEVYREYKDVREQLR 62 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAG 126 D +LE L+ D +++E L+ + + + + + D + +EV AG Sbjct: 63 DAKAMLEDKLDADMRDMVKEEVSELEGQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAG 122 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L RMY+R+AE + +KTE +E E G K +I G A+ LK E G Sbjct: 123 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 182 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P + +EI I E D R+DT+ +SG GGQ VNTT Sbjct: 183 AHRVQRVPETESGGRIHTSTATVAVLP-EAEEVEINIHEKDVRVDTFASSGPGGQSVNTT 241 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K + Sbjct: 242 MSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAV 299 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R + +L G LDDF+ A + + Sbjct: 300 GTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350 >gi|293390164|ref|ZP_06634498.1| peptide chain release factor 2 [Aggregatibacter actinomycetemcomitans D7S-1] gi|290950698|gb|EFE00817.1| peptide chain release factor 2 [Aggregatibacter actinomycetemcomitans D7S-1] Length = 300 Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 167/298 (56%), Positives = 217/298 (72%), Gaps = 1/298 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 ++ IK ++ L D LLELA+E D E L ++ ++E +F + SGE D+ Sbjct: 2 VNTIKNLEQGLEDVDGLLELAVEAGDEDTFNEAIAELNALEQQLEKLEFRRMFSGEHDAC 61 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 D Y+++ AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G Sbjct: 62 DCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGE 121 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRA Sbjct: 122 YAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRA 181 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVN T+SAVRITHIP+G+VVQCQ +RSQHKNK QA L+AKLYELELQK+ Sbjct: 182 SGAGGQHVNKTESAVRITHIPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNAD 241 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 E +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 242 KQAMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 298 >gi|227111330|ref|ZP_03824986.1| peptide chain release factor 1 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 360 Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 117/337 (34%), Positives = 179/337 (53%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + +P + ++ + L RE L + ++ Q D + Sbjct: 9 LEALQERHEEVQALLGEPSVIADMDRFRTLSREYAQLTDITGCFQQWQQAQEDQQTAEMM 68 Query: 76 ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE + I+ + Q L D +LEV AG GG E+ +A Sbjct: 69 LDDPEMRDMAQEELKESKATIEALEQQLQVLLLPKDPDDERGCFLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + DGE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESRRWRVEVVSASDGEHGGYKEVIAKISGDGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V V ++ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMAEVPEAEMPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVQKRQQE--EASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 IR+Y P V D R N+ +V++G LD ++ Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDTLIQ 342 >gi|83591213|ref|YP_431222.1| peptide chain release factor 1 [Moorella thermoacetica ATCC 39073] gi|119361560|sp|Q2RFW0|RF1_MOOTA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|83574127|gb|ABC20679.1| bacterial peptide chain release factor 1 (bRF-1) [Moorella thermoacetica ATCC 39073] Length = 356 Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 110/347 (31%), Positives = 175/347 (50%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R L DP + + + + R L++ ++ + + + + Sbjct: 5 LEQIEARYEELGRLMGDPEVIADPEQLQKHARAHAALEDIVTTFRRYRQVSNELAEDKAM 64 Query: 76 ALEEDDCSILQETSDNLQR----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EE D + ++R + + + L D D +E+ AGAGG E+ Sbjct: 65 LEEEKDREFQELLKAEIERLTGEQERLEQELKILLLPKDPNDEKDIIMEIRAGAGGEEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R+AEK++++TE + H E G K ++G Y LK E GVHR+ Sbjct: 125 LFAGDLFRMYQRYAEKKRWRTEIISSHPTELGGFKEIIFQVEGQGVYSRLKFESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ V P + +++EI D R+D + +SG GGQ VNTT SAVR Sbjct: 185 RIPTTESGGRIHTSTATVAVLP-EAEEVDVEIKPEDLRVDIFCSSGPGGQSVNTTYSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV CQ E+SQ KNK +A +LRA+L ++ +RE + E ++++G G Sbjct: 244 ITHLPTGLVVSCQDEKSQLKNKEKAMRVLRARLLDMARAEREGE--LAEERRSQVGSGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + VL G+LD+ + A + + Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTLHHLDQVLAGELDEIIDALVTTDQ 347 >gi|227328865|ref|ZP_03832889.1| peptide chain release factor 1 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 360 Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 117/337 (34%), Positives = 179/337 (53%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + +P + ++ + L RE L + ++ Q D + Sbjct: 9 LEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQQWQQAQEDQQTAEMM 68 Query: 76 ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE + I+ + Q L D +LEV AG GG E+ +A Sbjct: 69 LDDPEMRDMAQEELKESKATIEALEQQLQVLLLPKDPDDERGCFLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + DGE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRVEVVSASDGEHGGYKEVIAKISGDGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V V ++ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMAEVPEAEMPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVQKRQQE--EASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 IR+Y P V D R N+ +V++G LD ++ Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDTLIQ 342 >gi|315127590|ref|YP_004069593.1| peptide chain release factor 2 [Pseudoalteromonas sp. SM9913] gi|315016104|gb|ADT69442.1| peptide chain release factor 2 [Pseudoalteromonas sp. SM9913] Length = 300 Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 167/297 (56%), Positives = 210/297 (70%), Gaps = 1/297 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + I + D L+ELA+E +D E L + ++E +F + SG DSN Sbjct: 2 VETIDNLVAGTDDVEGLVELAVEAEDQDTFDEAQSELADLNQQLEGLEFRRMFSGSHDSN 61 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 DAYL++ +G+GGTE+QDW N+LLRMY RW E + FK E +E DG+ AGIK AT+ G Sbjct: 62 DAYLDLQSGSGGTEAQDWCNILLRMYLRWGEAKGFKVELVEATDGDVAGIKGATVRFSGE 121 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S +VYP VDD+IEI+I+ SD RID YRA Sbjct: 122 YAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFVYPEVDDNIEIDINPSDLRIDVYRA 181 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVNTT+SAVRITH+PT VVQCQ ERSQHKNKAQA L+AKL+ELELQ++ Sbjct: 182 SGAGGQHVNTTESAVRITHVPTNTVVQCQNERSQHKNKAQAMKQLKAKLFELELQQQNAE 241 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 242 KQSQEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKFIEASLK 297 >gi|182416046|ref|YP_001821112.1| peptide chain release factor 2 [Opitutus terrae PB90-1] gi|177843260|gb|ACB77512.1| peptide chain release factor 2 [Opitutus terrae PB90-1] Length = 341 Score = 226 bits (575), Expect = 5e-57, Method: Composition-based stats. Identities = 160/327 (48%), Positives = 213/327 (65%), Gaps = 3/327 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL---ILLELALEEDDCSILQ 86 P W + A+ + + L A+ + ++ D L+E A E + S Q Sbjct: 1 MGAPTFWDSNERAQKHIAKLNGLKKAVLPVVAFHKKVEDLDVMVELVEAASEGERESYAQ 60 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E N+ + E++ + S L+G+ D N+A L + +GAGGTES DWA+ML RMY RWAE Sbjct: 61 ELDSNVTAMVEELDALEIASFLTGQFDRNNAILSIQSGAGGTESNDWADMLFRMYNRWAE 120 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 +R F E ++ G++AGI ATLLIKG NAYG+ K E+GVHRLVRISP+D+N RRHTSF Sbjct: 121 RRGFSIEVQDVQAGDQAGITKATLLIKGENAYGYAKAERGVHRLVRISPFDANKRRHTSF 180 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 ++ V + + +++EI+E+D RID YR+SG GGQ VNTTDSAVRITH+ +G+VV CQ E Sbjct: 181 CAVDVVAEITEDVDVEINENDLRIDVYRSSGKGGQGVNTTDSAVRITHLSSGIVVVCQNE 240 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQ KNKA A N+L+A+LYE + ++ + K EIGWG QIRSYVLQPYQMVKDL Sbjct: 241 RSQLKNKAAAMNVLKARLYEKKQDEQRAEMDKFYGEKGEIGWGAQIRSYVLQPYQMVKDL 300 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAI 353 RT + + VLDGDLD F+ A L Sbjct: 301 RTGVSTSDTQGVLDGDLDRFVNAWLRA 327 >gi|260911088|ref|ZP_05917720.1| peptide chain release factor RF2 [Prevotella sp. oral taxon 472 str. F0295] gi|260634786|gb|EEX52844.1| peptide chain release factor RF2 [Prevotella sp. oral taxon 472 str. F0295] Length = 394 Score = 226 bits (575), Expect = 6e-57, Method: Composition-based stats. Identities = 126/359 (35%), Positives = 204/359 (56%), Gaps = 12/359 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L D D L +T+ P W + A+ M++ + ++ I KE+ Sbjct: 32 IQERAEALHRYLDIDRKRVELEEEELRTQAPDFWDDPARAQEQMKKVKGIEKWIVGYKEV 91 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + + D+ +E ++ ++ +E + ++L + D D L+++ Sbjct: 92 RQATDELQLAFDFY--HDEMVTEEEVDEDYRKAITAIENLELMNMLRQKEDPMDCVLKIN 149 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWL 181 +GAGGTESQDWA ML+RMY RWAE + + +G+EAGIKS T+ I+ G AYG+L Sbjct: 150 SGAGGTESQDWAQMLMRMYMRWAEAHGHRVTISNLQEGDEAGIKSVTMEIEGGEYAYGYL 209 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVR+SPY++ +R TSF+S++V P+VDD+IE+ + S D +R+ GAGGQ Sbjct: 210 KSENGVHRLVRVSPYNAQGKRMTSFASVFVSPLVDDTIEVYVDPSKVSWDLFRSGGAGGQ 269 Query: 242 HVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 +VN ++ VR+ + T ++++ + R Q +N+ A +L+++LY+ ++KR Sbjct: 270 NVNKVETGVRLRYQYTDPDTGEEEEILIENTESRKQLENRNNAMRLLKSQLYDRAMKKRL 329 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E E+ K +I WG QIRSYV + VKD RTN + V+DG +DDF+KA L Sbjct: 330 EAQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTADVDGVMDGKIDDFIKAYLM 387 >gi|253688500|ref|YP_003017690.1| peptide chain release factor 1 [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259585241|sp|C6DHY1|RF1_PECCP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|251755078|gb|ACT13154.1| peptide chain release factor 1 [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 360 Score = 226 bits (575), Expect = 6e-57, Method: Composition-based stats. Identities = 117/337 (34%), Positives = 178/337 (52%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + +P + ++ + L RE L + ++ Q D + Sbjct: 9 LEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQQWQQAQEDQQTAEMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE I+ + Q L D +LEV AG GG E+ +A Sbjct: 69 LDDPEMRDMAQEELKEGKATIEALEQQLQVLLLPKDPDDERGCFLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + DGE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESRRWRVEVMSASDGEHGGYKEVIAKISGDGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V V ++ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMAEVPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVQKRQQE--EASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 IR+Y P V D R N+ +V++G LD ++ Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDTLIQ 342 >gi|90581727|ref|ZP_01237514.1| peptide chain release factor 1 [Vibrio angustum S14] gi|90437081|gb|EAS62285.1| peptide chain release factor 1 [Vibrio angustum S14] Length = 362 Score = 226 bits (575), Expect = 6e-57, Method: Composition-based stats. Identities = 111/339 (32%), Positives = 176/339 (51%), Gaps = 9/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72 + V+R + D + + + L +E L+ + Q D + Sbjct: 9 LETLVERYEEVQHLLGDASVLADQNRFRALSKEYSQLEEVTKCFQAYQQAKEDLVAAEEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + E +E + I+ + Q + D + ++E+ AGAGG E+ Sbjct: 69 AQEDDAEMREMAQEEIKEAKAEIERLADELQVLLIPKDPNDDRNCFVEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AE R ++ E + + E+ G K + G YG LK E G HR+ R Sbjct: 129 FAGDLFRMYSKYAESRGWRIEIINENRSEQGGYKEMIAKVNGDGVYGILKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P + ++ EI+ D +IDT+RASGAGGQHVNTTDSA+RI Sbjct: 189 VPATESQGRVHTSACTVAVLPEIPEAEIPEINAGDLKIDTFRASGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR + + +G G Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRHAE--EASTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +IR+Y P V D R + ++V++GDLD ++ Sbjct: 307 DRIRTYNY-PQGRVSDHRITLTLYRLNEVMEGDLDALIQ 344 >gi|256848019|ref|ZP_05553463.1| peptide chain release factor 1 [Lactobacillus coleohominis 101-4-CHN] gi|256715079|gb|EEU30056.1| peptide chain release factor 1 [Lactobacillus coleohominis 101-4-CHN] Length = 362 Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats. Identities = 108/355 (30%), Positives = 176/355 (49%), Gaps = 12/355 (3%) Query: 9 CLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---D 64 + +FD R LN DP + + L +E L + + Q Sbjct: 2 EMEEIFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYHQYQKVTQ 61 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHA 123 + D+ LL +++ + +E + + + + + + D + +E+ Sbjct: 62 TIKDDEELLRDTKDDELIEMTKEELASSKEEQDQLAHELEVLLIPKDPNDDKNIIMEIRG 121 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 AGG E+ +A L MY +AEK+ + E ++ + E G K L+I G Y LK Sbjct: 122 AAGGDEASLFAGDLYNMYLHYAEKQGWNVEIVDKTETEVGGFKEIVLMISGDKVYSKLKF 181 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G HR+ RI +S R HTS +++ V P + ++I++ D R+D YR+SGAGGQH+ Sbjct: 182 ENGAHRVQRIPVTESAGRVHTSTATVGVMP-EAEDVQIDLDPKDIRVDVYRSSGAGGQHI 240 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SAVR+TH+PTG+VV Q ERSQ +N+A+A +L+A++Y+ QK E + + K Sbjct: 241 NKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKARVYDYYQQK--EQSAYDQKRK 298 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IG G +IR+Y P V D R + ++DGDLD+ ++A + + Sbjct: 299 DAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMDGDLDEIIEALIIADQ 352 >gi|168334105|ref|ZP_02692318.1| peptide chain release factor 1 [Epulopiscium sp. 'N.t. morphotype B'] Length = 356 Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats. Identities = 123/351 (35%), Positives = 192/351 (54%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD V + ++ K +P + + + + LM+E L + KE + L Sbjct: 1 MFDQIKELVVKFENISAKVNEPAVIADQVTWRALMKEISTLSPIVEKYKEYKTVLTAIDD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L + E+ D +L + L K E + L + D + +E+ GAGG Sbjct: 61 SLLMLEEKLDDDMLALVKEELSDNKKRVEPLEEELKILLLPTDPNDEKNVIVEIRGGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY R+AE+ K+KTE ++I++ G K A ++KG AY LK E GV Sbjct: 121 DEAALFAADLYRMYHRFAERSKWKTELMDINENGIGGFKEAIFMLKGDGAYSRLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S+ R HTS ++ + P + +++E++ +D ++D +R+SG GGQ VNTTD Sbjct: 181 HRVQRVPDTESSGRIHTSTVTVAIMP-EAEDVDVEVNPNDVKVDVFRSSGNGGQSVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+VV CQ E+SQ KNK +A +LRAKLYELEL K++ + I K+++G Sbjct: 240 SAVRLTHLPTGIVVSCQDEKSQLKNKDKAMKVLRAKLYELELNKQKAL--IAAEKKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + VLDGDL++ + + Sbjct: 298 TGDRSERIRTYNF-PQGRVTDHRVGLTVHKLEQVLDGDLEEIISTLTTFDQ 347 >gi|171319081|ref|ZP_02908205.1| peptide chain release factor 1 [Burkholderia ambifaria MEX-5] gi|171095720|gb|EDT40676.1| peptide chain release factor 1 [Burkholderia ambifaria MEX-5] Length = 360 Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats. Identities = 118/346 (34%), Positives = 176/346 (50%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72 D RL+ LN ++ ++ + + L RE L + + D L Sbjct: 9 LDQLSTRLAELNDLLSRENVTADLDQYRRLTREHAELGPVVEQYALWRQSRNDETAAQEL 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L A D ++ K D + +LE+ AG GG ES Sbjct: 69 LADASMRDFAEDEIRSARERMVRLEGELQKMLL--PKDPNDDRNIFLEIRAGTGGDESAL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A LLRMY R+AE+++++ E + + G K + I G AY LK E G HR+ R Sbjct: 127 FAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+ Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ ++DGDLD+ + A + + Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYRLEALMDGDLDELIGALVTEHQ 349 >gi|34496516|ref|NP_900731.1| peptide chain release factor RF-2 [Chromobacterium violaceum ATCC 12472] gi|34102370|gb|AAQ58736.1| peptide chain release factor RF-2 [Chromobacterium violaceum ATCC 12472] Length = 299 Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats. Identities = 159/294 (54%), Positives = 214/294 (72%), Gaps = 1/294 (0%) Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 + I + D+ L ++ E+D + +L+ ++ +V +F + D + + Sbjct: 4 LDGINATIGDSRELFDMGKSEEDDDTILAVQADLEEVEAKVAQLEFRRMFHDPMDPTNCF 63 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +++ AGAGGTE+QDWA MLLRMYTR+AE++ FK + LE+ +GE AG+ SATL I+G AY Sbjct: 64 IDIQAGAGGTEAQDWAGMLLRMYTRYAERKGFKVDVLELSEGEVAGVTSATLKIEGEYAY 123 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G L+ E GVHRLVR+SP+DSN+RRHTSFSS++VYP VDDS EI+I+ +D R DTYRASGA Sbjct: 124 GLLRTEVGVHRLVRVSPFDSNARRHTSFSSVFVYPEVDDSFEIDINPADVRTDTYRASGA 183 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQH+N TDSAVR+THIPTG+VVQCQ +RSQH+N+ +AW MLRAKLYELEL+KR E Sbjct: 184 GGQHINKTDSAVRLTHIPTGIVVQCQNDRSQHRNRDEAWQMLRAKLYELELKKRNEAKQA 243 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E +KT++GWG QIRSYV +KDLRT+ E + V+DGDLD F++A+L Sbjct: 244 LEDTKTDVGWGHQIRSYVFD-QSRIKDLRTSYEVGNIKGVMDGDLDGFIEASLK 296 >gi|298497806|ref|ZP_07007613.1| peptide chain release factor 1 [Vibrio cholerae MAK 757] gi|297542139|gb|EFH78189.1| peptide chain release factor 1 [Vibrio cholerae MAK 757] Length = 362 Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats. Identities = 113/346 (32%), Positives = 178/346 (51%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72 ++ V+R + DP + + + + L +E L+ + Q D + Sbjct: 9 LESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + E E I+ + Q L D + +LE+ AGAGG E+ Sbjct: 69 AQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AEK+ ++ E + + E G K + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P + ++ EI SD +IDT+R+SGAGGQHVNTTDSA+RI Sbjct: 189 VPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WG 309 TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E KR I ++ + +G Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAE--ISDTRRNLLGSRDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + ++V++GD+ + + + Sbjct: 307 DRIRTYNY-PQGRVSDHRIILTVYRLTEVMEGDMQSLIDPVIHEHQ 351 >gi|330684805|gb|EGG96498.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU121] Length = 358 Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats. Identities = 114/351 (32%), Positives = 186/351 (52%), Gaps = 13/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + +R LN DP + + + + +E+ L + + + + + Sbjct: 1 MFDQLEIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQAELQKTVDVYRSYKSKKEELAD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 + E+ E D ++ + +K E+ + + D D +E+ A AGG Sbjct: 61 IEEMLNETSDKEEIEMLKEESSSLKNELPEMEEQLKLLLIPKDPNDEKDVIVEIRAAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L+RMY+++AE FKTE +E+ + + G K + + G AY LK E G Sbjct: 121 DEAAIFAGDLMRMYSKYAEAHHFKTEIVEVSESDHGGYKEISFSVSGNGAYSKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +EIEI D +IDTYR+SGAGGQHVNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTGV+ E+SQ +N+ +A +L+A+LY+++LQ EE K+ +G Sbjct: 240 SAVRITHLPTGVIATSS-EKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYASQRKSAVG 296 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + S +++G+LD+ + A ++ Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLSQIMEGNLDEIIDALTLSEQ 346 >gi|149907580|ref|ZP_01896327.1| peptide chain release factor 1 [Moritella sp. PE36] gi|149809250|gb|EDM69179.1| peptide chain release factor 1 [Moritella sp. PE36] Length = 362 Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats. Identities = 112/346 (32%), Positives = 185/346 (53%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R + +P + + + L +E L+ +S KE QD D E+ Sbjct: 9 LEALIERHEEVQALLGEPEIISDQDRYRALTKEYSQLEELVSCFKEYQDAKEDFESAEEM 68 Query: 76 ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 +ED + + + + L DSN+ +LE+ AGAGG E+ Sbjct: 69 LKDEDPDMREMAVEEYKESKATVARVSDELEVLLLPRDPNDSNNCFLEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AEK+ ++ + + + ++ G K + ++G +G +K E G HR+ R Sbjct: 129 FAGDLYRMYSRYAEKKGWRLTIMNLSNSDQGGYKEVIVKMEGEAVFGTMKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P V + I I+ +D ++DT+RASGAGGQHVN TDSAVRI Sbjct: 189 VPETESQGRIHTSACTVVVMPEVPEVDAIVINTADLKVDTFRASGAGGQHVNKTDSAVRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG VV+CQ ERSQHKN+A+A ++L+A++ E +K + ++ + G Sbjct: 249 THIPTGTVVECQDERSQHKNRARAMSILQARIQAAEDEK--ARLEEESTRRSLVASGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ ++V++G+LD ++ + + Sbjct: 307 ERIRTYNY-PQGRVSDHRINLTLYRLNEVMEGELDVLIQPIIHEHQ 351 >gi|259503694|ref|ZP_05746596.1| peptide chain release factor RF1 [Lactobacillus antri DSM 16041] gi|259168326|gb|EEW52821.1| peptide chain release factor RF1 [Lactobacillus antri DSM 16041] Length = 362 Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats. Identities = 107/355 (30%), Positives = 178/355 (50%), Gaps = 12/355 (3%) Query: 9 CLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD--- 64 + +FD R LN DP + + L +E L + E + Sbjct: 2 EISEIFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKQVTQ 61 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHA 123 + D+ +L + D ++ ++ + + ++E + + + D + +E+ Sbjct: 62 TIKDDEEMLRETDDPDLAAMTKDELAESKERQEQLEKELEVLLIPKDPNDDKNIIMEIRG 121 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 AGG E+ +A L MY +AEK+ +K E ++ + E G K L+I G N Y LK Sbjct: 122 AAGGDEASLFAADLYNMYLHYAEKQGWKVEVVDKSETEVGGFKEIALMITGTNVYSKLKF 181 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G HR+ R+ +S R HTS +++ V P + ++++I D R+D YR+SGAGGQHV Sbjct: 182 ENGAHRVQRVPVTESAGRVHTSTATVGVMP-EAEDVDVDIDPKDIRVDVYRSSGAGGQHV 240 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SAVR+TH+PTG+VV Q ERSQ +N+A+A +L++++Y+ QK E + K Sbjct: 241 NKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYYQQK--EQNAYDKKRK 298 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IG G +IR+Y P V D R + ++ G+LD+ ++A + + Sbjct: 299 NAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMSGELDEIIEALIVADQ 352 >gi|220905560|ref|YP_002480872.1| peptide chain release factor 1 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|254790877|sp|B8J4R4|RF1_DESDA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|219869859|gb|ACL50194.1| peptide chain release factor 1 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 356 Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats. Identities = 106/345 (30%), Positives = 173/345 (50%), Gaps = 11/345 (3%) Query: 13 LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F + ++ L P ++ + + + L + L + + + + + Sbjct: 1 MFAKLEGLEKKYLELEEALAQPDVFNDQDQYRKLTKAHADLSDVVELFRRHRAVSEELAE 60 Query: 72 L-LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD--SNDAYLEVHAGAGGT 128 L L E+ + + + + +L + + +L + LE+ AG GG Sbjct: 61 NRLLLHDEDPEIRAMAQEEVHRGEAELPNLEHELKVMLLPSDPLDEKNTILEIRAGTGGE 120 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMYTR+AE + +K E + E G K LI G Y LK E G H Sbjct: 121 EAALFAADLFRMYTRYAELKNWKVEIMSESPSENGGYKEIICLIAGDRVYSHLKFEAGTH 180 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ ++ R HTS +++ V P + +++EI D RID YRASGAGGQHVN T+S Sbjct: 181 RVQRVPATEAQGRIHTSAATVAVMP-EAEEVDVEIRPEDLRIDIYRASGAGGQHVNKTES 239 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PT VV CQ ERSQHKNKA+A +L +++ E +++ + + K ++G Sbjct: 240 AVRITHLPTNTVVTCQDERSQHKNKARAMKVLASRILAAERERQ--SSELSADRKAQVGS 297 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G +IR+Y P D R N+ S +++G+L+ ++A Sbjct: 298 GDRSERIRTYNF-PQGRCTDHRINLTLYSLDRIMEGELESLVEAL 341 >gi|300920409|ref|ZP_07136843.1| peptide chain release factor 1 [Escherichia coli MS 115-1] gi|300412542|gb|EFJ95852.1| peptide chain release factor 1 [Escherichia coli MS 115-1] Length = 360 Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats. Identities = 113/344 (32%), Positives = 178/344 (51%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ ++ + + Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +G G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRGEIMSASEGGHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + D+ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R+Y P V D R N+ +V++G LD ++ + + Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 349 >gi|261491637|ref|ZP_05988220.1| peptide chain release factor 2 [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494996|ref|ZP_05991465.1| peptide chain release factor 2 [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309405|gb|EEY10639.1| peptide chain release factor 2 [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312763|gb|EEY13883.1| peptide chain release factor 2 [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 304 Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats. Identities = 161/302 (53%), Positives = 211/302 (69%), Gaps = 1/302 (0%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 L+ ++ IK ++ + D L+ELA+E +D E ++ ++ +F+ + SG Sbjct: 2 LEQIVNTIKALEQGIEDVEGLIELAVEAEDQDTFNEAQVEADELEKKLADLEFKRMFSGP 61 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 DS D YL++ AG+GGTE+QDW MLLRMY RWAE + FK E +E DG+ AGIKSAT+ Sbjct: 62 HDSADCYLDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKAELMEASDGDVAGIKSATVK 121 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I G AYGW + E G+HRLVR SP+D+N+ RHTSFS+ +VYP VDD I+IEI+ +D RID Sbjct: 122 ISGDYAYGWFRTETGIHRLVRKSPFDANNGRHTSFSAAFVYPEVDDDIDIEINPADLRID 181 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 YRASGAGGQHVN T+SAVRITHIP+G+VVQCQ RSQH+NK QA L+AKLYELE+ K Sbjct: 182 VYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNGRSQHQNKDQAMKQLKAKLYELEMSK 241 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + E +K++IGWG QIRSYVL +KD RT +E + VLDGDLD F++A+L Sbjct: 242 KNAEKQAMEDNKSDIGWGSQIRSYVLDD-SRIKDHRTGVEHRTTQQVLDGDLDKFVEASL 300 Query: 352 AI 353 Sbjct: 301 KA 302 >gi|259046347|ref|ZP_05736748.1| peptide chain release factor 1 [Granulicatella adiacens ATCC 49175] gi|259036984|gb|EEW38239.1| peptide chain release factor 1 [Granulicatella adiacens ATCC 49175] Length = 359 Score = 225 bits (574), Expect = 6e-57, Method: Composition-based stats. Identities = 109/347 (31%), Positives = 171/347 (49%), Gaps = 12/347 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D+ + R L+ DP + + L +E +L + K Q + + Sbjct: 1 MFDQLDSFIIRYDELSELLSDPEVIGDTKRFMELTKEEANLRPKVETFKRYQQVVEEISD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 E+ E D + + + L +K E + F L D + +E+ AGG Sbjct: 61 TEEMLGESLDAEMAEMAKEELSSLKKEKVELEDKIKFLLLPEDPNDGKNIIMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A LL MY ++AE + ++ E ++ + G K L+I G N + LK E G Sbjct: 121 DEAALFAGDLLTMYQKYAESQGWRVEVMDANVTGIGGYKEVILMITGDNVFSKLKYESGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P ++ + D R+D Y ASGAGGQHVN T Sbjct: 181 HRVQRVPSTESQGRVHTSTATVVVMPEAEEVEIEL-EDKDIRVDIYHASGAGGQHVNKTA 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+VV Q ERSQ KN+ +A +LRA++Y+ Q E + + K+ +G Sbjct: 240 SAVRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYDKISQ--EAQSEYDANRKSAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G +IR+Y P V D R + VL G +D+ + A + Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDQVLAGKIDEIVDALI 343 >gi|223043916|ref|ZP_03613957.1| peptide chain release factor 1 [Staphylococcus capitis SK14] gi|222442631|gb|EEE48735.1| peptide chain release factor 1 [Staphylococcus capitis SK14] Length = 358 Score = 225 bits (574), Expect = 7e-57, Method: Composition-based stats. Identities = 114/351 (32%), Positives = 183/351 (52%), Gaps = 13/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D +R LN DP + + + + +E+ L + + + + + Sbjct: 1 MFDQLDIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQADLQKTVEVYRSYKSKKEELED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 + E+ E D + + +K E+ + + D D +E+ A AGG Sbjct: 61 IEEMLKETSDKEEVDMLKEESASLKAELPEMEEELKILLIPKDPNDEKDVIVEIRAAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L+RMY+++AE FKTE +E + + G K + + G AY LK E G Sbjct: 121 DEAAIFAGDLMRMYSKYAEAYGFKTEIVEASESDHGGYKEISFSVSGSGAYSKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +EIEI D +IDTYR+SGAGGQHVNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTGV+ E+SQ +N+ +A +L+A+LY+++LQ EE K+ +G Sbjct: 240 SAVRITHLPTGVIATSS-EKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYASQRKSAVG 296 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++G+LD+ + A ++ Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGNLDEIIDALTLSEQ 346 >gi|27468634|ref|NP_765271.1| peptide chain release factor 1 [Staphylococcus epidermidis ATCC 12228] gi|57867593|ref|YP_189289.1| peptide chain release factor 1 [Staphylococcus epidermidis RP62A] gi|251812171|ref|ZP_04826644.1| peptide chain release factor 1 [Staphylococcus epidermidis BCM-HMP0060] gi|282876474|ref|ZP_06285340.1| peptide chain release factor 1 [Staphylococcus epidermidis SK135] gi|293366082|ref|ZP_06612770.1| peptide chain release factor RF1 [Staphylococcus epidermidis M23864:W2(grey)] gi|32171533|sp|Q8CNI7|RF1_STAES RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|71153098|sp|Q5HMA4|RF1_STAEQ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|27316181|gb|AAO05315.1|AE016749_261 peptide chain release factor RF-1 [Staphylococcus epidermidis ATCC 12228] gi|57638251|gb|AAW55039.1| peptide chain release factor 1 [Staphylococcus epidermidis RP62A] gi|251804268|gb|EES56925.1| peptide chain release factor 1 [Staphylococcus epidermidis BCM-HMP0060] gi|281294726|gb|EFA87254.1| peptide chain release factor 1 [Staphylococcus epidermidis SK135] gi|291319805|gb|EFE60163.1| peptide chain release factor RF1 [Staphylococcus epidermidis M23864:W2(grey)] gi|329726142|gb|EGG62614.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU144] gi|329734173|gb|EGG70491.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU045] gi|329735695|gb|EGG71978.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU028] Length = 358 Score = 225 bits (574), Expect = 7e-57, Method: Composition-based stats. Identities = 113/351 (32%), Positives = 186/351 (52%), Gaps = 13/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D +R LN DP + + + + +E+ L + + + + + Sbjct: 1 MFDQLDIVEERYEQLNELLSDPDVVNDADKLRKYSKEQADLQKTVDVYRSYKTKKEELQD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 + ++ E D ++ + +K E+ + + D D +E+ A AGG Sbjct: 61 IEDMLNETSDKEEVEMLKEESSALKTELPDMEEELKILLIPKDPNDDKDVIVEIRAAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L+RMY+++AE FKTE +E + + G K + + G AY LK E G Sbjct: 121 DEAAIFAGDLMRMYSKYAEANGFKTEIVEASESDHGGYKEVSFSVSGTGAYSKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +EIEI D +IDTYR+SGAGGQHVNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EAEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTGV+ E+SQ +N+ +A +L+A+LY+++LQ EE K+ +G Sbjct: 240 SAVRITHLPTGVIATSS-EKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYASQRKSAVG 296 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + + +++G+LD+ ++A ++ Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLNQIMEGNLDEIVEALTLSEQ 346 >gi|311070220|ref|YP_003975143.1| peptide chain release factor 1 [Bacillus atrophaeus 1942] gi|310870737|gb|ADP34212.1| peptide chain release factor 1 [Bacillus atrophaeus 1942] Length = 356 Score = 225 bits (574), Expect = 7e-57, Method: Composition-based stats. Identities = 105/351 (29%), Positives = 176/351 (50%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + +R LN DP + + + + +E+ + + + +D Sbjct: 1 MLDRLKSIEERYERLNELLSDPEVVNDPNKLREYSKEQSDISETVEVYRRYRDASEQLAD 60 Query: 72 LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + ++ D + + + + + + + D + +E+ AGG Sbjct: 61 AKAMLEDKLDAEMREMVKEEISELQDETEAMTDQLKLLLVPKDPNDDKNVIMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE + +KTE +E G K ++I G AY LK E G Sbjct: 121 EEAALFAGNLYRMYSRYAELQGWKTEIMEASVTGTGGYKEIIIMINGKGAYSKLKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ P + +E++I E D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLP-EAEEVEVDIHEKDIRVDTFTSSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ ++E A ++ K+ +G Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKF--QQEAQAEYDQTRKSAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L+G LD+F+ A + + Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEFVDALIMEDQ 347 >gi|154148037|ref|YP_001406088.1| peptide chain release factor 2 [Campylobacter hominis ATCC BAA-381] gi|238686699|sp|A7I0P7|RF2_CAMHC RecName: Full=Peptide chain release factor 2; Short=RF-2 gi|153804046|gb|ABS51053.1| peptide chain release factor 2 [Campylobacter hominis ATCC BAA-381] Length = 364 Score = 225 bits (574), Expect = 7e-57, Method: Composition-based stats. Identities = 161/354 (45%), Positives = 230/354 (64%), Gaps = 2/354 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L +++ + + + RL+ + +DP LW + +A + RE+ + N ++ K+ Sbjct: 12 ELKNKISNVEAIIKPKILMTRLAEIEKTEQDPALWVDAKKAAQIGREKTKISNILAKFKK 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 Q+ L D ELA+ E+D + E ++ + + +LSGE D +A + + Sbjct: 72 AQNELNDAKEFYELAVSENDGETINELFRESAKLSENIANLELSMMLSGENDDKNAIINI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 H GAGGTE +DWA ML RMY R+ E+ +K E L+ +G+EAGIK ++KG NAYG+L Sbjct: 132 HPGAGGTEGEDWAGMLYRMYVRFCERVGYKIEILDFQEGDEAGIKDVNFIVKGENAYGYL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HRLVRISP+DS RRHTSF+S+ V P +DD I+I I E D RID YR+SGAGGQ Sbjct: 192 KVESGIHRLVRISPFDSAGRRHTSFASVVVSPELDDDIQINIDEKDLRIDYYRSSGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPT +VVQCQ +R QHKNKA A +L+++LYELE K++E +N ++ Sbjct: 252 HVNKTESAVRITHIPTNIVVQCQNDRDQHKNKASAMKVLKSRLYELEKLKKQEESN--KT 309 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K++I WG QIR+YVL PYQ VKDLR+NI + +LDGD+ ++ L + Sbjct: 310 PKSDIAWGYQIRNYVLFPYQQVKDLRSNIAYSQAEAILDGDIKKILEDVLINNQ 363 >gi|15616167|ref|NP_244472.1| peptide chain release factor 2 in translation [Bacillus halodurans C-125] gi|10176229|dbj|BAB07324.1| peptide chain release factor 2 in translation [Bacillus halodurans C-125] Length = 288 Score = 225 bits (574), Expect = 7e-57, Method: Composition-based stats. Identities = 163/285 (57%), Positives = 206/285 (72%) Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 + EL EE D + QE L+ + E+ + + LL+ D N+A LE+H GAGGT Sbjct: 1 MEVSYELCKEETDADLQQELEQGLKGLVKELNEFELQLLLNEPYDKNNAILELHPGAGGT 60 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 ESQDWA+MLLRMYTRWAE + +K E L+ G+EAG+KS TLLIKG NAYG+LK E+GVH Sbjct: 61 ESQDWASMLLRMYTRWAENKGYKVETLDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVH 120 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RLVRISP+DS+ RRHTSF S V P +DDS+EIEIS D +IDTYR+SGAGGQHVNTTDS Sbjct: 121 RLVRISPFDSSGRRHTSFVSCEVMPELDDSVEIEISTEDLKIDTYRSSGAGGQHVNTTDS 180 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PT VV CQ ERSQ KN+ +A ML+AKL +L+L+++++ + EIGW Sbjct: 181 AVRITHLPTNTVVTCQSERSQIKNRERAMKMLQAKLLQLKLEEQQKELAEIRGEQKEIGW 240 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 G QIRSYV PY MVKD RTN+E + + V+DG++D F+ A L Sbjct: 241 GSQIRSYVFHPYSMVKDHRTNVEVGNTNAVMDGEIDSFIDAYLRW 285 >gi|307566238|ref|ZP_07628684.1| putative peptide chain release factor 2 [Prevotella amnii CRIS 21A-A] gi|307345042|gb|EFN90433.1| putative peptide chain release factor 2 [Prevotella amnii CRIS 21A-A] Length = 374 Score = 225 bits (574), Expect = 7e-57, Method: Composition-based stats. Identities = 121/359 (33%), Positives = 203/359 (56%), Gaps = 12/359 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + ++ L D +T+ P W++ A+ M++ + ++ + + Sbjct: 10 ILSRVESLKRYLGIDKKRIEFEEEQLRTQAPDFWESPDYARQQMKKVKEIERWVKGYDKA 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + + + D E ++ +E + +++L E D + ++++ Sbjct: 70 KAQAEELQLAFDFYK--DKLVTEDEVDTMYNKVVSTIEDLELKNMLRQEEDPMECVMKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PNAYGWL 181 +GAGGTESQDWA ML+RMY RW E +K +I G+EAGIKS T+ + AYG+L Sbjct: 128 SGAGGTESQDWAEMLMRMYMRWGEAHGYKVTISDILSGDEAGIKSVTMKFESGEYAYGYL 187 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVR+SP+++ +R TSF+S++V P+VDD+IE+ + + DT+R+SGAGGQ Sbjct: 188 KSENGVHRLVRVSPFNAQGKRMTSFASVFVTPLVDDTIEVYVDPARVSWDTFRSSGAGGQ 247 Query: 242 HVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 +VN +S VR+ + ++++ + R Q KN+A+A +L+++LY E++KR Sbjct: 248 NVNKVESGVRLRYQYEDPDTGEKEEILIENTETRDQPKNRAKAMQLLKSQLYNREMKKRM 307 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E E++K +I WG QIRSYV + VKD RTN + + V++G +DDF+KA L Sbjct: 308 EAQAKVEAAKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVEGVMNGKIDDFIKAYLM 365 >gi|296113010|ref|YP_003626948.1| peptide chain release factor 1 [Moraxella catarrhalis RH4] gi|295920704|gb|ADG61055.1| peptide chain release factor 1 [Moraxella catarrhalis RH4] gi|326560389|gb|EGE10771.1| peptide chain release factor 1 [Moraxella catarrhalis 7169] gi|326561241|gb|EGE11604.1| peptide chain release factor 1 [Moraxella catarrhalis 46P47B1] gi|326564062|gb|EGE14306.1| peptide chain release factor 1 [Moraxella catarrhalis 12P80B1] gi|326565872|gb|EGE16034.1| peptide chain release factor 1 [Moraxella catarrhalis BC1] gi|326570557|gb|EGE20597.1| peptide chain release factor 1 [Moraxella catarrhalis BC8] gi|326573200|gb|EGE23169.1| peptide chain release factor 1 [Moraxella catarrhalis CO72] gi|326576112|gb|EGE26028.1| peptide chain release factor 1 [Moraxella catarrhalis 101P30B1] gi|326577062|gb|EGE26956.1| peptide chain release factor 1 [Moraxella catarrhalis O35E] Length = 359 Score = 225 bits (574), Expect = 7e-57, Method: Composition-based stats. Identities = 116/341 (34%), Positives = 171/341 (50%), Gaps = 7/341 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V R + DP + + + L E L + ++ D EL Sbjct: 9 LDQMVDRFEEVTALLSDPDTISDNKKFRELSMEHSDLSEITTTWQDFVQAEADLQTANEL 68 Query: 76 ALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + E I+ E L D A+LE+ AG GG E+ ++ Sbjct: 69 LSDPEMKEMALDEIEVARANIETLEERLNVMMLPKDPNDKATAFLEIRAGTGGDEAAIFS 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY ++ + + ++ E L ++GE G K + G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYQKYTQSQGWQVEVLSANEGEHGGYKEIIARVSGIGVYGRLKFESGAHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P V+ +EI+ SD RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 189 ATESQGRVHTSACTVAVMPEVEIDDTVEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTGVV +CQQERSQH NK +A ML A++ + ++Q +I + + +G G + Sbjct: 249 IPTGVVAECQQERSQHANKEKAMKMLVARIQQAKVQ--AQIDATSDMRRNLVGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IR+Y P + D R N+ +++GDL + + + L Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSLLR 346 >gi|115350468|ref|YP_772307.1| peptide chain release factor 1 [Burkholderia ambifaria AMMD] gi|170703671|ref|ZP_02894403.1| peptide chain release factor 1 [Burkholderia ambifaria IOP40-10] gi|172059501|ref|YP_001807153.1| peptide chain release factor 1 [Burkholderia ambifaria MC40-6] gi|122324144|sp|Q0BIQ0|RF1_BURCM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238689166|sp|B1YSD5|RF1_BURA4 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|115280456|gb|ABI85973.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia ambifaria AMMD] gi|170131417|gb|EDT00013.1| peptide chain release factor 1 [Burkholderia ambifaria IOP40-10] gi|171992018|gb|ACB62937.1| peptide chain release factor 1 [Burkholderia ambifaria MC40-6] Length = 360 Score = 225 bits (574), Expect = 7e-57, Method: Composition-based stats. Identities = 119/346 (34%), Positives = 177/346 (51%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72 D RL+ LN ++ ++ + + L RE L + + D L Sbjct: 9 LDQLSTRLAELNDLLSRENVTADLDQYRRLTREHAELGPVVEQYALWRQSRNDETAAQEL 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L A D ++ K D + +LE+ AGAGG ES Sbjct: 69 LADASMRDFAEDEIRSARERMVRLEAELQKMLL--PKDPNDDRNIFLEIRAGAGGDESAL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A LLRMY R+AE+++++ E + + G K + I G AY LK E G HR+ R Sbjct: 127 FAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+ Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ ++DGDLD+ + A + + Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYRLEALMDGDLDELIGALVTEHQ 349 >gi|326796200|ref|YP_004314020.1| peptide chain release factor 1 [Marinomonas mediterranea MMB-1] gi|326546964|gb|ADZ92184.1| Peptide chain release factor 1 [Marinomonas mediterranea MMB-1] Length = 362 Score = 225 bits (573), Expect = 7e-57, Method: Composition-based stats. Identities = 114/348 (32%), Positives = 181/348 (52%), Gaps = 9/348 (2%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 F ++ +R L + + + + +E L+ + +E Q L + Sbjct: 7 FKLESLAERYEELAALLSEADVIMDQNLFRNYSKEYSELEPVVKCFEEYQVVLENLEEAQ 66 Query: 74 ELALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + D + ++ + + Q L DS + +LEV AG GG E+ Sbjct: 67 LMLTDSDPDIKEMGQEELKSGNEQKETLLLDLQKLLLPKDPNDSKNVFLEVRAGTGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 ++ L RMY+R+AE +++K E + ++GE G K I G AY LK E G HR+ Sbjct: 127 SIFSGDLFRMYSRYAETQRWKVEIVSANEGEHGGYKEIIARIVGEGAYSKLKFESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS ++ V P +D+ +I+I+++D RIDT+RASGAGGQHVN TDSA+ Sbjct: 187 QRVPATESQGRIHTSACTVAVMPEMDEVSDIDINKADLRIDTFRASGAGGQHVNKTDSAI 246 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PTGVVV+CQ ERSQHKN+A+A +L ++L E + A E+ ++ +G G Sbjct: 247 RIVHLPTGVVVECQDERSQHKNRAKAMALLASRLKAAEE--DKAAAEQSETRRSLVGTGD 304 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +++ GDLD + + + Sbjct: 305 RSDRIRTYNY-PQGRVTDHRINLTLYKLDEIVAGDLDVLVGPLVNEHQ 351 >gi|303249514|ref|ZP_07335721.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307251860|ref|ZP_07533761.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307256355|ref|ZP_07538138.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|302651588|gb|EFL81737.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860552|gb|EFM92564.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306865181|gb|EFM97081.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 301 Score = 225 bits (573), Expect = 7e-57, Method: Composition-based stats. Identities = 157/299 (52%), Positives = 214/299 (71%), Gaps = 1/299 (0%) Query: 55 AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114 ++ I+ + + D L+ELA+E +D E ++ ++ +F+ + SG+ D+ Sbjct: 2 VVNTIRTLDQGVEDVEGLIELAVEAEDEDTFNEAQVEANELEEKLAKLEFQRMFSGQHDA 61 Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 D Y+++ AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G Sbjct: 62 ADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITG 121 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YR Sbjct: 122 EYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINLADLRIDVYR 181 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 ASGAGGQHVN T+SAVRITHIP+G+VVQCQ RSQH+NK Q L+AKLYE+E+ K+ Sbjct: 182 ASGAGGQHVNKTESAVRITHIPSGIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNA 241 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + E SK++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 242 EKQVMEESKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKFIEASLKA 299 >gi|299821847|ref|ZP_07053735.1| peptide chain release factor RF1 [Listeria grayi DSM 20601] gi|299817512|gb|EFI84748.1| peptide chain release factor RF1 [Listeria grayi DSM 20601] Length = 358 Score = 225 bits (573), Expect = 7e-57, Method: Composition-based stats. Identities = 109/347 (31%), Positives = 179/347 (51%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72 + R LN DP + + + L +E+ + + ++ + D++ + L Sbjct: 5 LQSVENRYEELNELLSDPDVVSDPKRLRDLSKEQSSISQTVETYRDYKEVTDQIAETKEL 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L L++D + +E + LQ K E + + D + +E+ AGG E+ Sbjct: 65 LNEKLDDDMREMAKEELNELQENKTHLEEKLKLLLVPKDPNDDKNVIMEIRGAAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AE R +K E ++ + G K ++I G A+ LK E G HR+ Sbjct: 125 LFAGDLFRMYSRYAESRGWKAEIMDANPTGIGGYKEVIVMINGDGAFSRLKYENGAHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ + P + +EI+I + D R DT+ ++GAGGQ VNTT SAVR Sbjct: 185 RVPETESGGRIHTSTATVAILP-EAEDVEIDIQDKDIRTDTFASTGAGGQSVNTTMSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTG+VV Q ERSQ KNK +A +LRA++Y+ +RE + K+ +G G Sbjct: 244 LTHIPTGIVVSMQDERSQIKNKEKAMKVLRARIYDKF--EREAREEYDANRKSAVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + V++G +D+ + A + + Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQVMEGKIDEIIDALIVEDQ 347 >gi|291550769|emb|CBL27031.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus torques L2-14] Length = 320 Score = 225 bits (573), Expect = 7e-57, Method: Composition-based stats. Identities = 145/310 (46%), Positives = 214/310 (69%), Gaps = 1/310 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL-QRIKLEVEYKQF 104 M+E + L +++ I ++ D L+L+E++ ED+ E + + E + Sbjct: 1 MKELKGLQDSVKEIDKLFTDYEDMLLLIEMSEGEDEEQEAAEEIEEELGTFEEVFEKLRI 60 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 +LL G D+++A + +HAGAGGTE+ DW ML RMY+RWAEK+ ++ E L+ +G+ AG Sbjct: 61 STLLIGPYDADNAIVTLHAGAGGTEAMDWTGMLYRMYSRWAEKKGYEVEMLDYLEGDVAG 120 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IK T +KG NAYG+L+ E+GVHRLVRISP+++N +R TSF+S V P +++ I+IEI+ Sbjct: 121 IKGVTFEVKGENAYGYLRSEKGVHRLVRISPFNANGKRQTSFASCDVIPDIEEDIDIEIN 180 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 + D R+DTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQH NK +A ML++KL Sbjct: 181 DDDIRVDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQHMNKDKAMQMLKSKL 240 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 Y L+ Q++ E + +I +G QIRSYV+QPY +VKD RTN E ++ V+DG++D Sbjct: 241 YVLKQQEQAEKMSDIRGEVRDINFGNQIRSYVMQPYTLVKDHRTNAEISNVGAVMDGNID 300 Query: 345 DFMKATLAIK 354 F+ A L++ Sbjct: 301 PFINAYLSMD 310 >gi|255037851|ref|YP_003088472.1| peptide chain release factor 1 [Dyadobacter fermentans DSM 18053] gi|254950607|gb|ACT95307.1| peptide chain release factor 1 [Dyadobacter fermentans DSM 18053] Length = 357 Score = 225 bits (573), Expect = 7e-57, Method: Composition-based stats. Identities = 107/346 (30%), Positives = 180/346 (52%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R ++ + P + + + +E + L + Q D EL Sbjct: 5 LEAIKERFEEVSQQIIQPEVVSDSTRYSKISKEYKDLGRIVEQYALYQKLQKDIAGTKEL 64 Query: 76 ALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + L +++ + + + DS + LE+ G GG E+ Sbjct: 65 IATEKDEDLREMAKEELDDLLPKLEELEQNIKELLIPKDPNDSRNIILEIRGGTGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R+ EK +++ ++ +G G K ++G + YG +K E GVHR+ Sbjct: 125 IFAGDLFRMYQRFIEKMGWRSSVMDYTEGTNGGYKEIICKVEGEDVYGKMKFESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +S+ V P + ++++I+ +D RIDT+++SGAGGQ VNTT SAVR Sbjct: 185 RVPATESQGRIHTSAASVAVLP-EAEEVDVQINMNDVRIDTFQSSGAGGQSVNTTYSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +THIP+G+VV CQ ERSQ KNK +A ++LR++LYE+EL+K + I K+ +G G + Sbjct: 244 LTHIPSGLVVSCQDERSQLKNKDRALSVLRSRLYEIELKKHND--AISSQRKSMVGSGDR 301 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P + D R + V++GD+ D ++ + Sbjct: 302 SDKIRTYNY-PQSRITDHRIGYTVYNLPAVMEGDIADLIEKLRIAE 346 >gi|317133626|ref|YP_004092940.1| peptide chain release factor 1 [Ethanoligenens harbinense YUAN-3] gi|315471605|gb|ADU28209.1| peptide chain release factor 1 [Ethanoligenens harbinense YUAN-3] Length = 356 Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 113/350 (32%), Positives = 184/350 (52%), Gaps = 11/350 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ ++ R + + + P + LMRE + L + Q D + Sbjct: 1 MFEQLEDTCSRYTEIAARLSQPDALADRAAYAKLMREHKQLTPLVEAYHAYQQATADEME 60 Query: 72 LLELALEED---DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 EL D +E +D + + L D + +E+ AGAGG Sbjct: 61 ARELLENGDADLRALAAEELADARAEKERLEQKLHLLLLPRDPNDEKNVIIEIRAGAGGE 120 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMY+ +AE+R +K E L +++ E G+K + +++G AY LK E GVH Sbjct: 121 EAALFAAELFRMYSMYAERRGWKAETLNMNETELGGMKEISCMVEGEGAYSRLKFESGVH 180 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ ++ R HTS ++ V P + +E++I+ D RIDT+R+SGAGGQH+N T+S Sbjct: 181 RVQRVPETEAGGRIHTSTVTVAVLP-EAEDVEVDIAPEDLRIDTFRSSGAGGQHINKTES 239 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 A+RITH+PTG+VV+CQ ERSQHKN+ +A +LR++L + ++E I + +T++G Sbjct: 240 AIRITHLPTGLVVECQDERSQHKNRDRAMKVLRSRLLDRAQSAQDEE--IATTRRTQVGT 297 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + VL G+LD+ + + + Sbjct: 298 GDRSERIRTYNF-PQGRVTDHRIGLTLYHLDAVLSGNLDEVIDPLITADQ 346 >gi|189502103|ref|YP_001957820.1| peptide chain release factor 1 [Candidatus Amoebophilus asiaticus 5a2] gi|238692309|sp|B3ES89|RF1_AMOA5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189497544|gb|ACE06091.1| hypothetical protein Aasi_0702 [Candidatus Amoebophilus asiaticus 5a2] Length = 355 Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 112/346 (32%), Positives = 179/346 (51%), Gaps = 12/346 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + ++ ++ + DP + ++ + L + + L + + L + Sbjct: 1 MIDKLEAIEKKYEEVSKQIVDPSIMADMKQYASLNKTYKELSKIVDVYTVYKSNLANLES 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 L E D + + + ++L+ + F L DS + LE+ AG GG Sbjct: 61 AKTLLSIEKDAAFRDLAKEEIDSLELQKTQLEEDLKFLLLPKDPNDSKNVILEIRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AEK ++K +E + G K I G AYG LK E GV Sbjct: 121 DEAGIFAGDLFRMYSRFAEKMQWKLSIIEEVESTSGGYKEIICSIAGEGAYGMLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS +S+ V P D +E+++ +D R DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPATETQGRIHTSAASVVVLP-EMDEVEVDLDMNDIRKDTFCSSGPGGQSVNTTY 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SA+R+THIPTG+VV CQ E+SQ KN +A +LRA+LYE EL+K+++ IG ++ + Sbjct: 240 SAIRLTHIPTGIVVSCQDEKSQIKNLEKALKVLRARLYEQELKKQQD--AIGAERRSMVK 297 Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G + IR+Y P V D R + V+DG + D ++A Sbjct: 298 SGDRSDKIRTYNF-PQGRVTDHRIGYTIHNLPAVMDGAVGDLIEAL 342 >gi|78187994|ref|YP_378332.1| peptide chain release factor 1 [Chlorobium chlorochromatii CaD3] gi|119361520|sp|Q3AUE2|RF1_CHLCH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|78170193|gb|ABB27289.1| bacterial peptide chain release factor 1 (bRF-1) [Chlorobium chlorochromatii CaD3] Length = 357 Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 107/352 (30%), Positives = 175/352 (49%), Gaps = 13/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D ++ L DP L + + L RE +L + Q + + Sbjct: 1 MLDKLQAIKEKHLDLEQALSDPSLANDQERFRKLNREYSNLREVVQAFDAYQRKATELEA 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 L E D + + ++ V + L EADS + +E+ AG GG Sbjct: 61 AQHLLATESDTEMKALAEAEVDELQETVAELEQGLKILLLPKEEADSRNVIIEIRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNAYGWLKGEQG 186 E+ +A L RMY R+AE++ ++ + L+ ++ G K L I G N +G +K E G Sbjct: 121 DEASLFAADLTRMYQRYAEQKGWQYKVLDYNESSVPGGFKEMILEISGNNVFGTMKYESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ ++ R HTS S+ V P + +++EI D R DTYR+ G GGQ+VN Sbjct: 181 VHRVQRVPDTEAQGRIHTSAVSVAVLP-EAEEVDVEIRRDDLRFDTYRSGGKGGQNVNKV 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 ++AVRITH+PTG+V CQ+ERSQ +NK +A MLR KLY+++L ++++ +T + Sbjct: 240 ETAVRITHMPTGIVAACQEERSQLQNKERAMQMLRTKLYDIQLAEQQQQRADL--RRTMV 297 Query: 307 GWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G + IR+Y P V D R + ++ G+L + ++A + + Sbjct: 298 ATGDRSAKIRTYNY-PQSRVTDHRIGFTSHALPQIMQGELHEVIEALIMHDQ 348 >gi|320174901|gb|EFW50020.1| Peptide chain release factor 1 [Shigella dysenteriae CDC 74-1112] Length = 360 Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 114/344 (33%), Positives = 179/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ ++ + + Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQDELRKAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGCLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + D+ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R+Y P V D R N+ +V++G LD ++ + + Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 349 >gi|88192214|pdb|2B3T|B Chain B, Molecular Basis For Bacterial Class 1 Release Factor Methylation By Prmc Length = 360 Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 113/344 (32%), Positives = 179/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ ++ + + Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + D+ +++ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDVNPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R+Y P V D R N+ +V++G LD ++ + + Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 349 >gi|34763568|ref|ZP_00144503.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|237742325|ref|ZP_04572806.1| peptide chain release factor 1 [Fusobacterium sp. 4_1_13] gi|256845604|ref|ZP_05551062.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_36A2] gi|294785107|ref|ZP_06750395.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_27] gi|27886757|gb|EAA23895.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|229429973|gb|EEO40185.1| peptide chain release factor 1 [Fusobacterium sp. 4_1_13] gi|256719163|gb|EEU32718.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_36A2] gi|294486821|gb|EFG34183.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_27] Length = 357 Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 122/351 (34%), Positives = 183/351 (52%), Gaps = 11/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + V R LN P + + + + + + KE + + D Sbjct: 1 MFDKLEEVVARYDELNKMLVSPEVLADSKKMIECNKAINEITEIVEKYKEYKKYVDDIEF 60 Query: 72 LLELALEEDDCSILQE----TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + E E D + + + +++ E + L + D + +E+ AGAGG Sbjct: 61 IKESFKTEKDSDMKEMLNEELKEAEEKLPKLEEELKILLLPKDKNDDKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE++K+K E +E DGE GIK I G AY LK E GV Sbjct: 121 DEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELGGIKEIAFTIIGLGAYSRLKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +++ R HTS +++ V P V+D E+ + D +IDTYRA GAGGQHVN TD Sbjct: 181 HRVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVIVDPKDLKIDTYRAGGAGGQHVNMTD 240 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VVQCQ ERSQ KN+ +A L KLYE+E +K+ + ++G Sbjct: 241 SAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQRSEVE--SERRLQVG 298 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P + D R + LDGD+D+ + A + + Sbjct: 299 TGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQ 348 >gi|152986475|ref|YP_001350646.1| peptide chain release factor 1 [Pseudomonas aeruginosa PA7] gi|166223587|sp|A6VC61|RF1_PSEA7 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|150961633|gb|ABR83658.1| peptide chain release factor 1 [Pseudomonas aeruginosa PA7] Length = 360 Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 113/342 (33%), Positives = 173/342 (50%), Gaps = 9/342 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + RE ++ I ++ + D L Sbjct: 9 LDVLSDRYEELTALLGDAEVISDQTRFRAYSREYAEVEPVILAFRDYRKVQADLEGAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + + + Q L D + +LE+ AG GG E+ Sbjct: 69 LKDSDPELRDLAEEEVAEARERLAALGDSLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AE++ ++ E L ++GE G K ++G N Y LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAERQGWRVETLSENEGEHGGYKEVIARVEGENVYAKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI+ +D R+DTYR+SGAGGQHVN TDSAVRI Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQHVNKTDSAVRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+P+G+VV+CQ+ERSQHKN+A+A L AKL + + I + K +G G Sbjct: 249 THLPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQ--AAAQQAIASTRKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R N+ S +V++G ++ ++ L Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYSLGEVMEGAVEQVIEPLL 347 >gi|303256163|ref|ZP_07342179.1| peptide chain release factor 1 [Burkholderiales bacterium 1_1_47] gi|331001217|ref|ZP_08324843.1| peptide chain release factor 1 [Parasutterella excrementihominis YIT 11859] gi|302860892|gb|EFL83967.1| peptide chain release factor 1 [Burkholderiales bacterium 1_1_47] gi|329568944|gb|EGG50740.1| peptide chain release factor 1 [Parasutterella excrementihominis YIT 11859] Length = 360 Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 116/344 (33%), Positives = 180/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 V+RL ++ +DP + N+ + + L +ER ++ + KE + D E+ Sbjct: 9 LTQLVRRLEEIDQNLQDPDVTSNMDQFRALSKERAEIEPVVLKAKEYEQAEEDLAAAEEM 68 Query: 76 ALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +E+ E ++ I+ + L D + YLE+ AG GG ES +A Sbjct: 69 LSDEEMKEFASEEIKATKKAIEQISSELEILLLPKDPNDEKNIYLEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE++K++ E + + G K + I G AY LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAERQKWQVEFVSASPSDLGGYKEIVVKIVGQGAYSKLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P D+ ++ I S+ RID YRASGAGGQH+ T+SAVRITH Sbjct: 189 ETESQGRVHTSACTVAVLPEADEIGDVVIDPSELRIDVYRASGAGGQHIQKTESAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNK +A +L ++++ ++ + + A K+ IG G + Sbjct: 249 LPTGIVVECQDERSQHKNKERAMGVLISRIHAAQVAEVQ--AKESSMRKSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ ++DGDLD + + Sbjct: 307 IRTYNY-PQGRVTDHRINLTLYKLDSIMDGDLDCLISPLTTEHQ 349 >gi|42527989|ref|NP_973087.1| peptide chain release factor 1 [Treponema denticola ATCC 35405] gi|81570139|sp|Q73JU6|RF1_TREDE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|41819034|gb|AAS13006.1| peptide chain release factor 1 [Treponema denticola ATCC 35405] Length = 361 Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 119/347 (34%), Positives = 182/347 (52%), Gaps = 12/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 DN +RL + + E+P+L ++V + K MRE +L + L Sbjct: 5 LDNLRKRLVEVEKEVENPNLIKDVAKYKETMREHSYLSKLMEEYDNYLSIEKQIEDSKLL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 EE D + + + L ++ E + + + + +E+ G GG E+ Sbjct: 65 IQEESDAELKEMAREELHSLEAAFEKSEADLKMLLIPPDPLEEKNIIMEIRGGTGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYT +AE + +K E L +++ E G K T I G YG L+ E GVHR+ Sbjct: 125 LFAADLFRMYTHYAEMKNWKYEVLSLNETELGGYKEITFSISGKYVYGSLRYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ + + R HTS ++ V P +++ I++ D RID RA G GGQ VNTTDSAVR Sbjct: 185 RVPETEGSGRIHTSAVTVAVLPEAEETEIE-INQEDLRIDVMRAGGPGGQCVNTTDSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIPTG+VV CQ E+SQ KNKA+A +LR++LY+LE K++ ++ K+++G G Sbjct: 244 ITHIPTGLVVICQDEKSQIKNKAKAMRVLRSRLYDLEESKKQAER--AQNRKSQVGSGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA-TLAIK 354 +IR+Y P V D R N+ V+ G LD+ + A +A + Sbjct: 302 SERIRTYNF-PQNRVTDHRINLTLYKLDAVMQGSLDELIDALCIAAR 347 >gi|293606108|ref|ZP_06688473.1| peptide chain release factor RF2 [Achromobacter piechaudii ATCC 43553] gi|292815563|gb|EFF74679.1| peptide chain release factor RF2 [Achromobacter piechaudii ATCC 43553] Length = 300 Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 157/298 (52%), Positives = 216/298 (72%), Gaps = 1/298 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + + + L D L ELA +DD S L+ + + ++E +F + S AD Sbjct: 2 VETLTSLGTGLADANELFELAKADDDDSTLESIEKDADAFQEKLENLEFRRMFSNPADPL 61 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 + +L++ AGAGGTE+QDWA+MLLR Y R+AE++ FK E LE +G+ AGIKSAT+ ++G Sbjct: 62 NCFLDIQAGAGGTEAQDWASMLLRQYLRYAERKGFKVEVLEESEGDVAGIKSATIKMEGE 121 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A+G+L+ E GVHRLVR SP+DS+ RHTSF+S++VYP VD+S E+E++ +D R+DTYRA Sbjct: 122 YAFGYLRTETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRVDTYRA 181 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQH+N TDSAVR+THIPTG+VVQCQ +RSQH+N+A+A ML++KLYELE++ R Sbjct: 182 SGAGGQHINKTDSAVRLTHIPTGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMAE 241 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 E SKT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 242 QQKLEDSKTDVGWGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQ 298 >gi|227538599|ref|ZP_03968648.1| peptide chain release factor 1 [Sphingobacterium spiritivorum ATCC 33300] gi|227241518|gb|EEI91533.1| peptide chain release factor 1 [Sphingobacterium spiritivorum ATCC 33300] Length = 357 Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 98/346 (28%), Positives = 173/346 (50%), Gaps = 12/346 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D +R + + +P ++ L +E + L + ++ + + Sbjct: 1 MLDKLQAIKERWQEVEAELSNPDTISDMKRFAKLNKEYKDLGKIVDQYHIYKNMVSNIDA 60 Query: 72 LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 ++ E D + + + + + + E + + D+ +A +E+ G GG Sbjct: 61 NKDILANEKDQELREMAKEELDILYGQKEEKEEEIRLMLIPKDPEDAKNAIIEIRGGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR+ E + ++ E +++ +G G K L + G +AYG LK E GV Sbjct: 121 DEAALFAGDLYRMYTRFFETKGWRNEVMDVTEGTSGGYKEVILKVIGDDAYGQLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS +S+ V P + +++E++ D + T R+ GAGGQ+VN + Sbjct: 181 HRVQRVPDTETQGRVHTSAASVAVLP-EAEDVDVELNPGDIEMQTSRSGGAGGQNVNKVE 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 + V++TH P+G+VV CQ ERSQ N+ A MLR KLYELE+QK+ + KT + Sbjct: 240 TKVQLTHKPSGIVVVCQVERSQLANRELAMEMLRNKLYELEVQKK--HGDTAAKRKTMVS 297 Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G + +R+Y P V + R + + V+DGD+ + A Sbjct: 298 TGDRSAKVRTYNY-PQGRVTEHRIGLTLYNLPAVMDGDIQGIIDAL 342 >gi|296331340|ref|ZP_06873812.1| peptide chain release factor 1 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676326|ref|YP_003867998.1| peptide chain release factor 1 [Bacillus subtilis subsp. spizizenii str. W23] gi|296151455|gb|EFG92332.1| peptide chain release factor 1 [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414570|gb|ADM39689.1| peptide chain release factor 1 [Bacillus subtilis subsp. spizizenii str. W23] Length = 356 Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 107/351 (30%), Positives = 178/351 (50%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + +R LN DP + + + + +E+ + + ++ +D Sbjct: 1 MLDRLKSIEERYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVDVYRQYRDASEQLAD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127 + E+ D + + + ++ E E + + D + +E+ AGG Sbjct: 61 AKAMLEEKLDAEMRDMVKEEISELQKETETLSERLKVLLIPKDPNDDKNVIMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE + +KTE +E G K +I G AY LK E G Sbjct: 121 EEAALFAGNLYRMYSRYAELQGWKTEVMEASVTGTGGYKEIIFMITGSGAYSKLKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ P + +E++I E D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLP-EAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ ++E A ++ K+ +G Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKF--QQEAQAEYDQTRKSAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L+G LD+ ++A + + Sbjct: 298 SGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQ 347 >gi|324113971|gb|EGC07945.1| peptide chain release [Escherichia fergusonii B253] Length = 360 Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 114/344 (33%), Positives = 179/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ ++ + + Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEGRRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + D+ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R+Y P V D R N+ +V++G LD ++ + + Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 349 >gi|239637411|ref|ZP_04678393.1| peptide chain release factor 1 [Staphylococcus warneri L37603] gi|239597011|gb|EEQ79526.1| peptide chain release factor 1 [Staphylococcus warneri L37603] Length = 358 Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 115/351 (32%), Positives = 185/351 (52%), Gaps = 13/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + +R LN DP + + + + +E+ L + + + + + Sbjct: 1 MFDQLEIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQAELQKTVDVYRSYKSKKEELAD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 + E+ E D ++ + +K E+ + + D D +E+ A AGG Sbjct: 61 IEEMLNETSDKEEIEMLKEESSSLKNELPEMEEQLKLLLIPKDPNDEKDVIVEIRAAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L+RMY+++AE FKTE +E + + G K + + G AY LK E G Sbjct: 121 DEAAIFAGDLMRMYSKYAEAHNFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +EIEI D +IDTYR+SGAGGQHVNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTGV+ E+SQ +N+ +A +L+A+LY+++LQ EE K+ +G Sbjct: 240 SAVRITHLPTGVIATSS-EKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYASQRKSAVG 296 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + S +L+G+LD+ + A ++ Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLSQILEGNLDEIIDALTLSEQ 346 >gi|238756935|ref|ZP_04618123.1| Peptide chain release factor 1 [Yersinia aldovae ATCC 35236] gi|238704765|gb|EEP97294.1| Peptide chain release factor 1 [Yersinia aldovae ATCC 35236] Length = 360 Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 118/337 (35%), Positives = 175/337 (51%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + KE + D + Sbjct: 9 LEALQERHEEVLAHLGDASVIADQDRFRALSREYAQLTDVTHCFKEWRSMQDDIDAAEMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE R + + Q L D D +LE+ AG GG E+ +A Sbjct: 69 LEDPEMREMAQEELKEAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 + RMY+R+AE R++K E + DGE G K + G YG LK E G HR+ R+ Sbjct: 129 GDMFRMYSRYAEARRWKVEIMSASDGEHGGYKEVIAKVSGDGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ EI+ D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR+ + + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQ--LAVASERRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ +V++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQ 342 >gi|148653259|ref|YP_001280352.1| peptide chain release factor 1 [Psychrobacter sp. PRwf-1] gi|172048528|sp|A5WFG1|RF1_PSYWF RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|148572343|gb|ABQ94402.1| bacterial peptide chain release factor 1 (bRF-1) [Psychrobacter sp. PRwf-1] Length = 364 Score = 225 bits (573), Expect = 8e-57, Method: Composition-based stats. Identities = 113/347 (32%), Positives = 179/347 (51%), Gaps = 10/347 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V R + DP + + + L E L + + + D E+ Sbjct: 9 LDQMVDRFEEVTALLSDPDTISDNNKFRELSMEHSELSEITALWQRYRQAEIDKKDAQEM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQ 131 + D + + + + ++E + E L D A+LE+ AG GG E+ Sbjct: 69 INDASDPDMKEMMQEEIDSASRDIEAMEEELNVMMLPKDPNDKVPAFLEIRAGTGGDEAA 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 ++ L RMY R+A + + E L ++GE G K + G + YG LK E G HR+ Sbjct: 129 IFSGDLFRMYERYASSQGWTIEVLSANEGEHGGYKEIISRVSGNDVYGRLKFESGAHRVQ 188 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS ++ V P V+ +E++ +D R+DT+R+SGAGGQHVNTTDSAVR Sbjct: 189 RVPETESQGRVHTSACTVAVMPEVEIDDTVELNPADIRMDTFRSSGAGGQHVNTTDSAVR 248 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTGVV +CQQERSQHKN+A+A ML A++ + ++Q++ + A+ + +G G Sbjct: 249 LTHIPTGVVAECQQERSQHKNRAKAMQMLIARIQQAKVQEQVDTADAL--RRNLVGSGDR 306 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ +++GDL + + A + Sbjct: 307 SERIRTYNF-PQGRMTDHRINLTLYKLDAIMEGDLTELLDALNREHQ 352 >gi|170761198|ref|YP_001785468.1| peptide chain release factor 1 [Clostridium botulinum A3 str. Loch Maree] gi|238688740|sp|B1KSR1|RF1_CLOBM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|169408187|gb|ACA56598.1| peptide chain release factor 1 [Clostridium botulinum A3 str. Loch Maree] Length = 358 Score = 225 bits (573), Expect = 9e-57, Method: Composition-based stats. Identities = 125/347 (36%), Positives = 195/347 (56%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L+ K DP + N E + L +E L+ ++ +E + D E+ Sbjct: 5 LNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLESDKEM 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 EE D + + + ++ + L++E + L D D ++E+ AGAGG E+ Sbjct: 65 LKEESDKELREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAGGEEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A+ LLRMYTR+AE++ +K E + ++ + G K T+ +KG AY LK E GVHR+ Sbjct: 125 LFASNLLRMYTRYAERKNWKVETISLNATDIGGFKEVTVAVKGKGAYSRLKYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S+ R HTS +++ V P D ++I I+ +D RID YRASG GGQ VNTTDSAVR Sbjct: 185 RVPDTESSGRIHTSTATVAVLP-EVDDVDININANDLRIDVYRASGHGGQCVNTTDSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV CQ E+SQ KNK +A +L+A+L+E E A+I E K+++G G Sbjct: 244 ITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAE--AERAASIAEDRKSQVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + LDGD+D+ ++A + + Sbjct: 302 SERIRTYNY-PQGRITDHRIGLTLYKLETFLDGDIDEAIEALVTEDQ 347 >gi|15801440|ref|NP_287457.1| peptide chain release factor 1 [Escherichia coli O157:H7 EDL933] gi|12514924|gb|AAG56069.1|AE005338_9 peptide chain release factor RF-1 [Escherichia coli O157:H7 str. EDL933] Length = 360 Score = 225 bits (573), Expect = 9e-57, Method: Composition-based stats. Identities = 114/344 (33%), Positives = 179/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSPCFTDWQQVQEDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ ++ + + Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + D+ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R+Y P V D R N+ +V++G LD ++ + + Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 349 >gi|261867765|ref|YP_003255687.1| peptide chain release factor 2 [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413097|gb|ACX82468.1| peptide chain release factor 2 [Aggregatibacter actinomycetemcomitans D11S-1] Length = 300 Score = 225 bits (573), Expect = 9e-57, Method: Composition-based stats. Identities = 168/298 (56%), Positives = 217/298 (72%), Gaps = 1/298 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 ++ IK ++ L D LLELA+E D E L ++ ++E +F + SGE D+ Sbjct: 2 VNTIKNLEQGLEDVDGLLELAVEAGDEDTFNEAITELNALEQQLEKLEFRRMFSGEHDAC 61 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 D Y+++ AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G Sbjct: 62 DCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGE 121 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRA Sbjct: 122 YAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRA 181 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVN T+SAVRITHIP+G+VVQCQ +RSQHKNK QA L+AKLYELELQK+ Sbjct: 182 SGAGGQHVNKTESAVRITHIPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNAD 241 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 E +K++IGWG QIRSYVL +KDLRT IE + VLDGDLD F++A+L Sbjct: 242 KQAMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDRFIEASLKA 298 >gi|302879738|ref|YP_003848302.1| peptide chain release factor 1 [Gallionella capsiferriformans ES-2] gi|302582527|gb|ADL56538.1| peptide chain release factor 1 [Gallionella capsiferriformans ES-2] Length = 362 Score = 225 bits (573), Expect = 9e-57, Method: Composition-based stats. Identities = 117/344 (34%), Positives = 178/344 (51%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +RL +N +++ + L RER L+ + Q D E+ Sbjct: 9 LGQLSERLLEVNQLLSTEEATRDMDTYRKLNRERAELEPVVDLFHAYQACEGDIAAAREM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 A + + + ++ + Q + L D +LEV AG GG E+ +A Sbjct: 69 AEDPEMREFADTEIKEGEAKLALLDKELQTQLLPKDPNDERSVFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE+R+++ E + GE G K I G AY LK E G HR+ R+ Sbjct: 129 GDLFRMYSRFAERRRWQVEVVSESPGEMGGYKEIIARIAGQGAYSVLKFESGAHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ + P VD+ ++ ++ +D RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 189 ATETQGRVHTSACTVAIMPEVDEVNDVVLNNADLRIDTFRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTGVVV+CQ RSQH+NKAQA +L A++ + Q R + A + K+ +G G + Sbjct: 249 IPTGVVVECQDGRSQHQNKAQAMRVLCARIKDA--QVRAQNAETAATRKSLVGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ ++DG++ + A +A + Sbjct: 307 IRTYNY-PQGRVTDHRINLTLYKMDAIMDGEISELTGALMAEHQ 349 >gi|148378145|ref|YP_001252686.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC 3502] gi|153932228|ref|YP_001382546.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC 19397] gi|153936703|ref|YP_001386098.1| peptide chain release factor 1 [Clostridium botulinum A str. Hall] gi|166223548|sp|A7FQG2|RF1_CLOB1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223549|sp|A5HY35|RF1_CLOBH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|148287629|emb|CAL81694.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC 3502] gi|152928272|gb|ABS33772.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC 19397] gi|152932617|gb|ABS38116.1| peptide chain release factor 1 [Clostridium botulinum A str. Hall] Length = 358 Score = 225 bits (573), Expect = 9e-57, Method: Composition-based stats. Identities = 125/347 (36%), Positives = 195/347 (56%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L+ K DP + N E + L +E L+ ++ +E + D E+ Sbjct: 5 LNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLESDKEM 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 EE D + + + ++ + L++E + L D D ++E+ AGAGG E+ Sbjct: 65 LKEESDKELREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAGGEEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A+ LLRMYTR+AE++ +K E + ++ + G K T+ +KG AY LK E GVHR+ Sbjct: 125 LFASNLLRMYTRYAERKNWKVETISLNATDIGGFKEVTVAVKGKGAYSRLKYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S+ R HTS +++ V P D ++I I+ +D RID YRASG GGQ VNTTDSAVR Sbjct: 185 RVPDTESSGRIHTSTATVAVLP-EVDDVDININANDLRIDVYRASGHGGQCVNTTDSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV CQ E+SQ KNK +A +L+A+L+E E A+I E K+++G G Sbjct: 244 ITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAE--AERAASIAEDRKSQVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + LDGD+D+ ++A + + Sbjct: 302 SERIRTYNY-PQGRITDHRIGLTLYKLETFLDGDIDEAIEALVTEDQ 347 >gi|330504612|ref|YP_004381481.1| peptide chain release factor 2 [Pseudomonas mendocina NK-01] gi|328918898|gb|AEB59729.1| peptide chain release factor 2 [Pseudomonas mendocina NK-01] Length = 304 Score = 225 bits (573), Expect = 9e-57, Method: Composition-based stats. Identities = 169/302 (55%), Positives = 221/302 (73%), Gaps = 1/302 (0%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 L + I ++ L D+ LLE+A EE+D + + ++R++ +E +F + SGE Sbjct: 2 LAQIVETIDDLTGSLADSRDLLEMAAEENDEGAVNDIVAEVERLREILEKLEFRRMFSGE 61 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 D+N+ YL++ AG+GGTE+QDWAN+LLRMY RWA+KR F E +E+ +GE AGIK AT+ Sbjct: 62 MDANNCYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFSAEIVELSEGEVAGIKGATVH 121 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 IKG A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ +D RID Sbjct: 122 IKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPADLRID 181 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 TYR+SGAGGQHVNTTDSAVRITH+PT VV CQ ERSQH NK A MLRAKLYELE+QK Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQK 241 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R + E SK++IGWG QIRSYVL +KDLRT +E++ VLDGDLD +++A+L Sbjct: 242 RNAASQALEDSKSDIGWGHQIRSYVLDD-SRIKDLRTGVERSDCQKVLDGDLDGYLEASL 300 Query: 352 AI 353 Sbjct: 301 KQ 302 >gi|163943017|ref|YP_001647901.1| peptide chain release factor 1 [Bacillus weihenstephanensis KBAB4] gi|229470347|sp|A9VSC7|RF1_BACWK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|163865214|gb|ABY46273.1| peptide chain release factor 1 [Bacillus weihenstephanensis KBAB4] Length = 355 Score = 225 bits (573), Expect = 9e-57, Method: Composition-based stats. Identities = 118/351 (33%), Positives = 182/351 (51%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68 + D R LN DP + + + + +E+ + + + +E +D +L D Sbjct: 1 MLDRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQDTVEVYREYKDVREQLRD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127 +LE L+ D +++E L+ + + + + + D + +EV AGG Sbjct: 61 AKAMLEDKLDADMRDMVKEEVSELEGQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE + +KTE +E E G K +I G A+ LK E G Sbjct: 121 DEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +EI I E D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EAEEVEINIHEKDVRVDTFASSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K +G Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L G LDDF+ A + + Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 347 >gi|295105440|emb|CBL02984.1| bacterial peptide chain release factor 1 (bRF-1) [Faecalibacterium prausnitzii SL3/3] Length = 361 Score = 225 bits (573), Expect = 9e-57, Method: Composition-based stats. Identities = 107/358 (29%), Positives = 180/358 (50%), Gaps = 15/358 (4%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + + D +R L+ + P + + LMRE + + ++ Q L Sbjct: 1 MQDISSRMD--AVCRRFEELSMRLNQPDAAADPALFRKLMREYHDTEPVVEAYRDWQTAL 58 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES------LLSGEADSNDAYLE 120 L E + + + + + E+ L D + +E Sbjct: 59 DHLAQAKALLEEPGSLDPDFKQMIQQEISEKSQDVAKLENNLKILLLPKDVNDGKNVIME 118 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + +GAGG E+ +A+ LLRMYT +A+ R + E L +++ E G+K A + + G AY Sbjct: 119 IRSGAGGEEAALFAHSLLRMYTMYAQNRGWTLELLNLNETELGGVKEAIISVDGAGAYNR 178 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E GVHR+ R+ ++ R HTS +++ V P + ++ + D RIDT+R+SGAGG Sbjct: 179 LKYESGVHRVQRVPETETQGRIHTSTATVAVMPQ-AEEVDFALDMKDLRIDTFRSSGAGG 237 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QH+N T SA+R+THIPTG VV+CQ ERSQ +NK +A +LR++L L +++E+ I Sbjct: 238 QHINKTSSAIRVTHIPTGTVVECQNERSQFQNKDKALEILRSRL--LAQKQKEQQDAINA 295 Query: 301 SSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + ++G G +IR+Y P D R + + ++DG+LD+ + A ++ Sbjct: 296 QRQGQVGTGDRSEKIRTYNF-PQDRCTDHRIGLTVHNLEKIMDGNLDEVIDALATREQ 352 >gi|157370232|ref|YP_001478221.1| peptide chain release factor 1 [Serratia proteamaculans 568] gi|166977369|sp|A8GDA3|RF1_SERP5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|157321996|gb|ABV41093.1| peptide chain release factor 1 [Serratia proteamaculans 568] Length = 361 Score = 225 bits (573), Expect = 9e-57, Method: Composition-based stats. Identities = 113/337 (33%), Positives = 174/337 (51%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + E + D + Sbjct: 9 LEALQERHEEVQALLGDAGVIAEQDRFRALSREYAQLTDVSRCFLEWRKVQDDLATAEMM 68 Query: 76 ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E D + + Q L D D +LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQEELKDAKAATEELEQQLQVLLLPKDPDDERDCFLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + ++GE G K + G +G LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAETRRWRVEIMSANEGEHGGYKEVIAKVSGDGVFGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P V ++ EI+ D +IDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVMPAVPEAELPEINAGDLKIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKRQQ--AEASTRRNLLGTGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ +V++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQ 342 >gi|16080754|ref|NP_391582.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis str. 168] gi|221311662|ref|ZP_03593509.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis str. 168] gi|221315990|ref|ZP_03597795.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320901|ref|ZP_03602195.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis str. JH642] gi|221325185|ref|ZP_03606479.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis str. SMY] gi|321313251|ref|YP_004205538.1| peptide chain release factor 1 [Bacillus subtilis BSn5] gi|1172909|sp|P45872|RF1_BACSU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|853776|emb|CAA89884.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis str. 168] gi|2636226|emb|CAB15718.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis str. 168] gi|291486285|dbj|BAI87360.1| peptide chain release factor 1 [Bacillus subtilis subsp. natto BEST195] gi|320019525|gb|ADV94511.1| peptide chain release factor 1 [Bacillus subtilis BSn5] Length = 356 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 107/351 (30%), Positives = 179/351 (50%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + +R LN DP + + + + +E+ + + ++ +D Sbjct: 1 MLDRLKSIEERYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVDVYRQYRDASEQLAD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127 + E+ D + + + ++ E E + + D + +E+ AGG Sbjct: 61 AKAMLEEKLDAEMRDMVKEEISELQKETETLSERLKVLLIPKDPNDDKNVIMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE + +KTE +E + G K +I G AY LK E G Sbjct: 121 EEAALFAGNLYRMYSRYAELQGWKTEVMEANVTGTGGYKEIIFMITGSGAYSKLKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ P + +E++I E D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLP-EAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ ++E A ++ K+ +G Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKF--QQEAQAEYDQTRKSAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L+G LD+ ++A + + Sbjct: 298 SGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQ 347 >gi|238792551|ref|ZP_04636184.1| Peptide chain release factor 1 [Yersinia intermedia ATCC 29909] gi|238728186|gb|EEQ19707.1| Peptide chain release factor 1 [Yersinia intermedia ATCC 29909] Length = 360 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 116/337 (34%), Positives = 174/337 (51%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + KE + D + Sbjct: 9 LEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSVQDDLEAAEMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE R + + Q L D D +LE+ AG GG E+ +A Sbjct: 69 LEDLEMREMAQEELKEAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 + RMY+R+AE R++K E + +GE G K + G +G LK E G HR+ R+ Sbjct: 129 GDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGDGVFGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ EI+ D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR+ + +G G + Sbjct: 249 IPTGLVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQ--LAEASERRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ +V++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQ 342 >gi|107103215|ref|ZP_01367133.1| hypothetical protein PaerPA_01004284 [Pseudomonas aeruginosa PACS2] gi|254236611|ref|ZP_04929934.1| peptide chain release factor 2 [Pseudomonas aeruginosa C3719] gi|313109107|ref|ZP_07795079.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa 39016] gi|126168542|gb|EAZ54053.1| peptide chain release factor 2 [Pseudomonas aeruginosa C3719] gi|310881581|gb|EFQ40175.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa 39016] Length = 300 Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats. Identities = 168/298 (56%), Positives = 223/298 (74%), Gaps = 1/298 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + + ++ L D+ LL++A+EEDD + + ++ ++R++ +E +F + SGE D N Sbjct: 2 VETLDDLTSGLADSRDLLDMAVEEDDEGAVDDVANEVERLREILEKLEFRRMFSGEMDPN 61 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 +AYL++ AG+GGTE+QDWANMLLRMY RWA+K F +E+ +GE AGIK AT+ IKG Sbjct: 62 NAYLDIQAGSGGTEAQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIKGATVHIKGE 121 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A+GWL+ E GVHRLVR SP+DS +RRHTSF++++V P +DD+IEIEI+ +D RIDTYR+ Sbjct: 122 YAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPADLRIDTYRS 181 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVNTTDSAVRITH+PT VV CQ ERSQH NK A MLRAKLYELE+QKR Sbjct: 182 SGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRTAA 241 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + E SK++IGWG QIRSYVL +KDLRT IE++ VLDGDLD++++A+L Sbjct: 242 SQALEDSKSDIGWGHQIRSYVLD-QSRIKDLRTGIERSDCDKVLDGDLDEYLEASLKQ 298 >gi|160945367|ref|ZP_02092593.1| hypothetical protein FAEPRAM212_02889 [Faecalibacterium prausnitzii M21/2] gi|158443098|gb|EDP20103.1| hypothetical protein FAEPRAM212_02889 [Faecalibacterium prausnitzii M21/2] Length = 361 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 107/358 (29%), Positives = 180/358 (50%), Gaps = 15/358 (4%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + + D +R L+ + P + + LMRE + + ++ Q L Sbjct: 1 MQDISSRMD--AVCRRFEELSMRLNQPDAAADPALFRKLMREYHDTEPVVEAYRDWQTAL 58 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES------LLSGEADSNDAYLE 120 L E + + + + + E+ L D + +E Sbjct: 59 DHLAQAKALLEEPGSLDPDFKQMIQQEISEKSQDVAKLENNLKILLLPKDVNDGKNVIME 118 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + +GAGG E+ +A+ LLRMYT +A+ R + E L +++ E G+K A + + G AY Sbjct: 119 IRSGAGGEEAALFAHSLLRMYTMYAQNRGWTLELLNLNETELGGVKEAIISVDGAGAYNR 178 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E GVHR+ R+ ++ R HTS +++ V P + ++ + D RIDT+R+SGAGG Sbjct: 179 LKYESGVHRVQRVPETETQGRIHTSTATVAVMPQ-AEEVDFALDMKDLRIDTFRSSGAGG 237 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QH+N T SA+R+THIPTG VV+CQ ERSQ +NK +A +LR++L L +++E+ I Sbjct: 238 QHINKTSSAIRVTHIPTGTVVECQNERSQFQNKDKALEILRSRL--LAQKQKEQQDAINA 295 Query: 301 SSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + ++G G +IR+Y P D R + + ++DG+LD+ + A ++ Sbjct: 296 QRQGQVGTGDRSEKIRTYNF-PQDRCTDHRIGLTVHNLEKIMDGNLDEVIDALATREQ 352 >gi|323187441|gb|EFZ72750.1| peptide chain release factor 1 [Escherichia coli RN587/1] Length = 360 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 114/344 (33%), Positives = 179/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ ++ + + Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPRDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + D+ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R+Y P V D R N+ +V++G LD ++ + + Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 349 >gi|320109111|ref|YP_004184701.1| peptide chain release factor 1 [Terriglobus saanensis SP1PR4] gi|319927632|gb|ADV84707.1| peptide chain release factor 1 [Terriglobus saanensis SP1PR4] Length = 355 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 108/347 (31%), Positives = 176/347 (50%), Gaps = 9/347 (2%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD R L ++ P + Q+ + M+ + L+ I +E ++ + Sbjct: 1 MFDRLQQMEVRYQELESELAQPEIVQDQPRYQKAMKAHRDLEILIEKFREFKEVMNGIAD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + D + +E L K E + L DS + LE+ AG GG E+ Sbjct: 61 AHTMLADPDMKEMAEEELSTLMPRKTEIEEELKIMLLPKDPNDSKNVVLEIRAGTGGDEA 120 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A + RMY R+AE+ ++K E L +G G+K T + +G Y LK E GVHR+ Sbjct: 121 ALFAEEMFRMYLRFAEQHRWKVEVLSEREGAVGGMKEVTAIFEGDQVYSQLKYESGVHRV 180 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS ++ V P + ++++I D RIDT+ +SG GGQ VNTT SA+ Sbjct: 181 QRVPATETQGRVHTSAITVAVLP-EAEEVDVKIEAKDLRIDTFCSSGPGGQSVNTTYSAI 239 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PT VV CQ E+SQ KN+ +A +LR++LYE+E+++ ++ K ++G G Sbjct: 240 RITHLPTNTVVSCQDEKSQIKNREKAMRVLRSRLYEVEMERVHQLQATA--RKAQVGSGD 297 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D R + V++G L + A +A Sbjct: 298 RSEKIRTYNF-PQNRLTDHRIGLTLHQLEYVMEGKLQPVVDALIAED 343 >gi|50121117|ref|YP_050284.1| peptide chain release factor 1 [Pectobacterium atrosepticum SCRI1043] gi|61214611|sp|Q6D551|RF1_ERWCT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|49611643|emb|CAG75092.1| peptide chain release factor 1 [Pectobacterium atrosepticum SCRI1043] Length = 360 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 117/337 (34%), Positives = 177/337 (52%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + +P + ++ + L RE L + ++ Q D + Sbjct: 9 LEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQQWQQAQEDQQTAEMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE I+ + Q L D +LEV AG GG E+ +A Sbjct: 69 LDDPEMRDMAQEELKEGKAAIEALEQELQVLLLPKDPDDERGCFLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + DGE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESRRWRVEVMSASDGEHGGYKEVIAKISGDGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V V ++ +I+ SD RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMAAVPEAELPDINPSDLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIRAAEIHKRQQE--EASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 IR+Y P V D R N+ +V++G LD ++ Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDALIQ 342 >gi|15830970|ref|NP_309743.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. Sakai] gi|16129174|ref|NP_415729.1| peptide chain release factor RF-1 [Escherichia coli str. K-12 substr. MG1655] gi|24112610|ref|NP_707120.1| peptide chain release factor 1 [Shigella flexneri 2a str. 301] gi|26247534|ref|NP_753574.1| peptide chain release factor 1 [Escherichia coli CFT073] gi|30062735|ref|NP_836906.1| peptide chain release factor 1 [Shigella flexneri 2a str. 2457T] gi|74312449|ref|YP_310868.1| peptide chain release factor 1 [Shigella sonnei Ss046] gi|82776551|ref|YP_402900.1| peptide chain release factor 1 [Shigella dysenteriae Sd197] gi|89108056|ref|AP_001836.1| peptide chain release factor RF-1 [Escherichia coli str. K-12 substr. W3110] gi|91210432|ref|YP_540418.1| peptide chain release factor 1 [Escherichia coli UTI89] gi|110641441|ref|YP_669171.1| peptide chain release factor 1 [Escherichia coli 536] gi|110805216|ref|YP_688736.1| peptide chain release factor 1 [Shigella flexneri 5 str. 8401] gi|117623429|ref|YP_852342.1| peptide chain release factor 1 [Escherichia coli APEC O1] gi|157158410|ref|YP_001462464.1| peptide chain release factor 1 [Escherichia coli E24377A] gi|157160716|ref|YP_001458034.1| peptide chain release factor 1 [Escherichia coli HS] gi|168750771|ref|ZP_02775793.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4113] gi|168758136|ref|ZP_02783143.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4401] gi|168764382|ref|ZP_02789389.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4501] gi|168771100|ref|ZP_02796107.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4486] gi|168776896|ref|ZP_02801903.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4196] gi|168782567|ref|ZP_02807574.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4076] gi|168787715|ref|ZP_02812722.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC869] gi|168801524|ref|ZP_02826531.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC508] gi|170020422|ref|YP_001725376.1| peptide chain release factor 1 [Escherichia coli ATCC 8739] gi|170080839|ref|YP_001730159.1| peptide chain release factor RF-1 [Escherichia coli str. K-12 substr. DH10B] gi|170682630|ref|YP_001743983.1| peptide chain release factor 1 [Escherichia coli SMS-3-5] gi|188494282|ref|ZP_03001552.1| peptide chain release factor 1 [Escherichia coli 53638] gi|191170894|ref|ZP_03032445.1| peptide chain release factor 1 [Escherichia coli F11] gi|193064852|ref|ZP_03045929.1| peptide chain release factor 1 [Escherichia coli E22] gi|193069953|ref|ZP_03050901.1| peptide chain release factor 1 [Escherichia coli E110019] gi|194426002|ref|ZP_03058558.1| peptide chain release factor 1 [Escherichia coli B171] gi|194434263|ref|ZP_03066529.1| peptide chain release factor 1 [Shigella dysenteriae 1012] gi|194437123|ref|ZP_03069222.1| peptide chain release factor 1 [Escherichia coli 101-1] gi|195939099|ref|ZP_03084481.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4024] gi|208807446|ref|ZP_03249783.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4206] gi|208816069|ref|ZP_03257248.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4045] gi|208822717|ref|ZP_03263036.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4042] gi|209398404|ref|YP_002270145.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4115] gi|209918452|ref|YP_002292536.1| peptide chain release factor 1 [Escherichia coli SE11] gi|217328218|ref|ZP_03444300.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. TW14588] gi|218549098|ref|YP_002382889.1| peptide chain release factor 1 [Escherichia fergusonii ATCC 35469] gi|218553765|ref|YP_002386678.1| peptide chain release factor 1 [Escherichia coli IAI1] gi|218558140|ref|YP_002391053.1| peptide chain release factor 1 [Escherichia coli S88] gi|218694725|ref|YP_002402392.1| peptide chain release factor 1 [Escherichia coli 55989] gi|218699918|ref|YP_002407547.1| peptide chain release factor 1 [Escherichia coli IAI39] gi|218704733|ref|YP_002412252.1| peptide chain release factor 1 [Escherichia coli UMN026] gi|227886367|ref|ZP_04004172.1| peptide chain release factor 1 [Escherichia coli 83972] gi|237705173|ref|ZP_04535654.1| peptide chain release factor RF-1 [Escherichia sp. 3_2_53FAA] gi|238900442|ref|YP_002926238.1| peptide chain release factor RF-1 [Escherichia coli BW2952] gi|253773790|ref|YP_003036621.1| peptide chain release factor 1 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161293|ref|YP_003044401.1| peptide chain release factor 1 [Escherichia coli B str. REL606] gi|254792681|ref|YP_003077518.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. TW14359] gi|256018539|ref|ZP_05432404.1| peptide chain release factor 1 [Shigella sp. D9] gi|260843503|ref|YP_003221281.1| peptide chain release factor RF-1 [Escherichia coli O103:H2 str. 12009] gi|260854872|ref|YP_003228763.1| peptide chain release factor RF-1 [Escherichia coli O26:H11 str. 11368] gi|260867616|ref|YP_003234018.1| peptide chain release factor RF-1 [Escherichia coli O111:H- str. 11128] gi|261224943|ref|ZP_05939224.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. FRIK2000] gi|261257200|ref|ZP_05949733.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. FRIK966] gi|291282236|ref|YP_003499054.1| Peptide chain release factor 1 [Escherichia coli O55:H7 str. CB9615] gi|293404754|ref|ZP_06648746.1| peptide chain release factor 1 [Escherichia coli FVEC1412] gi|293409598|ref|ZP_06653174.1| peptide chain release factor 1 [Escherichia coli B354] gi|293414488|ref|ZP_06657137.1| peptide chain release factor 1 [Escherichia coli B185] gi|293433527|ref|ZP_06661955.1| peptide chain release factor 1 [Escherichia coli B088] gi|298380397|ref|ZP_06989996.1| peptide chain release factor 1 [Escherichia coli FVEC1302] gi|300816902|ref|ZP_07097122.1| peptide chain release factor 1 [Escherichia coli MS 107-1] gi|300821019|ref|ZP_07101168.1| peptide chain release factor 1 [Escherichia coli MS 119-7] gi|300896599|ref|ZP_07115118.1| peptide chain release factor 1 [Escherichia coli MS 198-1] gi|300906882|ref|ZP_07124556.1| peptide chain release factor 1 [Escherichia coli MS 84-1] gi|300921823|ref|ZP_07137980.1| peptide chain release factor 1 [Escherichia coli MS 182-1] gi|300928243|ref|ZP_07143780.1| peptide chain release factor 1 [Escherichia coli MS 187-1] gi|300939553|ref|ZP_07154210.1| peptide chain release factor 1 [Escherichia coli MS 21-1] gi|300951678|ref|ZP_07165502.1| peptide chain release factor 1 [Escherichia coli MS 116-1] gi|300955611|ref|ZP_07167968.1| peptide chain release factor 1 [Escherichia coli MS 175-1] gi|300971920|ref|ZP_07171708.1| peptide chain release factor 1 [Escherichia coli MS 45-1] gi|300995966|ref|ZP_07181328.1| peptide chain release factor 1 [Escherichia coli MS 200-1] gi|301017243|ref|ZP_07182024.1| peptide chain release factor 1 [Escherichia coli MS 69-1] gi|301046860|ref|ZP_07193977.1| peptide chain release factor 1 [Escherichia coli MS 185-1] gi|301305581|ref|ZP_07211672.1| peptide chain release factor 1 [Escherichia coli MS 124-1] gi|301327073|ref|ZP_07220355.1| peptide chain release factor 1 [Escherichia coli MS 78-1] gi|301648136|ref|ZP_07247889.1| peptide chain release factor 1 [Escherichia coli MS 146-1] gi|306813891|ref|ZP_07448064.1| peptide chain release factor 1 [Escherichia coli NC101] gi|307137826|ref|ZP_07497182.1| peptide chain release factor 1 [Escherichia coli H736] gi|307310034|ref|ZP_07589684.1| peptide chain release factor 1 [Escherichia coli W] gi|309789161|ref|ZP_07683754.1| peptide chain release factor 1 [Shigella dysenteriae 1617] gi|309794302|ref|ZP_07688726.1| peptide chain release factor 1 [Escherichia coli MS 145-7] gi|312971398|ref|ZP_07785573.1| peptide chain release factor 1 [Escherichia coli 1827-70] gi|331641741|ref|ZP_08342876.1| peptide chain release factor 1 [Escherichia coli H736] gi|331646529|ref|ZP_08347632.1| peptide chain release factor 1 [Escherichia coli M605] gi|331662614|ref|ZP_08363537.1| peptide chain release factor 1 [Escherichia coli TA143] gi|331667595|ref|ZP_08368459.1| peptide chain release factor 1 [Escherichia coli TA271] gi|331676991|ref|ZP_08377687.1| peptide chain release factor 1 [Escherichia coli H591] gi|331682700|ref|ZP_08383319.1| peptide chain release factor 1 [Escherichia coli H299] gi|332279599|ref|ZP_08392012.1| peptide chain release factor RF-1 [Shigella sp. D9] gi|67471891|sp|P0A7I0|RF1_ECOLI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|67471892|sp|P0A7I1|RF1_ECOL6 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|67471893|sp|P0A7I2|RF1_ECO57 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|67471894|sp|P0A7I3|RF1_SHIFL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361536|sp|Q0TIF9|RF1_ECOL5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361537|sp|Q1RCM7|RF1_ECOUT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361608|sp|Q32GZ6|RF1_SHIDS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361609|sp|Q3Z0S9|RF1_SHISS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|122957490|sp|Q0T5I4|RF1_SHIF8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223555|sp|A1AAD8|RF1_ECOK1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166977361|sp|A7ZKY5|RF1_ECO24 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166977362|sp|A7ZZE7|RF1_ECOHS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189039971|sp|B1IU82|RF1_ECOLC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|226739104|sp|B7MKB3|RF1_ECO45 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|226739105|sp|B7NUX7|RF1_ECO7I RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|226739106|sp|B7LXC6|RF1_ECO8A RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|226739107|sp|B7N422|RF1_ECOLU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|226739108|sp|B1LH89|RF1_ECOSM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|226739109|sp|B7LSH9|RF1_ESCF3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|229576656|sp|B1XAQ2|RF1_ECODH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238058712|sp|B5YXM9|RF1_ECO5E RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238058713|sp|B6I9S6|RF1_ECOSE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790881|sp|B7LGX2|RF1_ECO55 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|259585238|sp|C4ZTQ2|RF1_ECOBW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|26107935|gb|AAN80134.1|AE016759_408 Peptide chain release factor 1 [Escherichia coli CFT073] gi|1651601|dbj|BAA36069.1| peptide chain release factor RF-1 [Escherichia coli str. K12 substr. W3110] gi|1787462|gb|AAC74295.1| peptide chain release factor RF-1 [Escherichia coli str. K-12 substr. MG1655] gi|13361181|dbj|BAB35139.1| peptide chain release factor RF-1 [Escherichia coli O157:H7 str. Sakai] gi|24051515|gb|AAN42827.1| peptide chain release factor RF-1 [Shigella flexneri 2a str. 301] gi|30040983|gb|AAP16713.1| peptide chain release factor RF-1 [Shigella flexneri 2a str. 2457T] gi|73855926|gb|AAZ88633.1| peptide chain release factor RF-1 [Shigella sonnei Ss046] gi|81240699|gb|ABB61409.1| peptide chain release factor RF-1 [Shigella dysenteriae Sd197] gi|91072006|gb|ABE06887.1| peptide chain release factor RF-1 [Escherichia coli UTI89] gi|110343033|gb|ABG69270.1| peptide chain release factor 1 [Escherichia coli 536] gi|110614764|gb|ABF03431.1| peptide chain release factor RF-1 [Shigella flexneri 5 str. 8401] gi|115512553|gb|ABJ00628.1| peptide chain release factor 1 [Escherichia coli APEC O1] gi|157066396|gb|ABV05651.1| peptide chain release factor 1 [Escherichia coli HS] gi|157080440|gb|ABV20148.1| peptide chain release factor 1 [Escherichia coli E24377A] gi|169755350|gb|ACA78049.1| peptide chain release factor 1 [Escherichia coli ATCC 8739] gi|169888674|gb|ACB02381.1| peptide chain release factor RF-1 [Escherichia coli str. K-12 substr. DH10B] gi|170520348|gb|ACB18526.1| peptide chain release factor 1 [Escherichia coli SMS-3-5] gi|187767792|gb|EDU31636.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4196] gi|188015105|gb|EDU53227.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4113] gi|188489481|gb|EDU64584.1| peptide chain release factor 1 [Escherichia coli 53638] gi|188999995|gb|EDU68981.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4076] gi|189354981|gb|EDU73400.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4401] gi|189360046|gb|EDU78465.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4486] gi|189365613|gb|EDU84029.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4501] gi|189372547|gb|EDU90963.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC869] gi|189376326|gb|EDU94742.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC508] gi|190908626|gb|EDV68214.1| peptide chain release factor 1 [Escherichia coli F11] gi|192927537|gb|EDV82154.1| peptide chain release factor 1 [Escherichia coli E22] gi|192956706|gb|EDV87161.1| peptide chain release factor 1 [Escherichia coli E110019] gi|194416057|gb|EDX32323.1| peptide chain release factor 1 [Escherichia coli B171] gi|194417494|gb|EDX33597.1| peptide chain release factor 1 [Shigella dysenteriae 1012] gi|194424106|gb|EDX40094.1| peptide chain release factor 1 [Escherichia coli 101-1] gi|208727247|gb|EDZ76848.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4206] gi|208732717|gb|EDZ81405.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4045] gi|208738202|gb|EDZ85885.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4042] gi|209159804|gb|ACI37237.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. EC4115] gi|209772528|gb|ACI84576.1| peptide chain release factor RF-1 [Escherichia coli] gi|209772530|gb|ACI84577.1| peptide chain release factor RF-1 [Escherichia coli] gi|209772532|gb|ACI84578.1| peptide chain release factor RF-1 [Escherichia coli] gi|209772534|gb|ACI84579.1| peptide chain release factor RF-1 [Escherichia coli] gi|209772536|gb|ACI84580.1| peptide chain release factor RF-1 [Escherichia coli] gi|209911711|dbj|BAG76785.1| peptide chain release factor 1 [Escherichia coli SE11] gi|217318645|gb|EEC27071.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. TW14588] gi|218351457|emb|CAU97165.1| peptide chain release factor RF-1 [Escherichia coli 55989] gi|218356639|emb|CAQ89265.1| peptide chain release factor RF-1 [Escherichia fergusonii ATCC 35469] gi|218360533|emb|CAQ98091.1| peptide chain release factor RF-1 [Escherichia coli IAI1] gi|218364909|emb|CAR02605.1| peptide chain release factor RF-1 [Escherichia coli S88] gi|218369904|emb|CAR17679.1| peptide chain release factor RF-1 [Escherichia coli IAI39] gi|218431830|emb|CAR12715.1| peptide chain release factor RF-1 [Escherichia coli UMN026] gi|222033010|emb|CAP75750.1| Peptide chain release factor 1 [Escherichia coli LF82] gi|226899930|gb|EEH86189.1| peptide chain release factor RF-1 [Escherichia sp. 3_2_53FAA] gi|227836571|gb|EEJ47037.1| peptide chain release factor 1 [Escherichia coli 83972] gi|238861984|gb|ACR63982.1| peptide chain release factor RF-1 [Escherichia coli BW2952] gi|242376990|emb|CAQ31713.1| peptide chain release factor RF1 [Escherichia coli BL21(DE3)] gi|253324834|gb|ACT29436.1| peptide chain release factor 1 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973194|gb|ACT38865.1| peptide chain release factor 1 [Escherichia coli B str. REL606] gi|253977408|gb|ACT43078.1| peptide chain release factor 1 [Escherichia coli BL21(DE3)] gi|254592081|gb|ACT71442.1| peptide chain release factor RF-1 [Escherichia coli O157:H7 str. TW14359] gi|257753521|dbj|BAI25023.1| peptide chain release factor RF-1 [Escherichia coli O26:H11 str. 11368] gi|257758650|dbj|BAI30147.1| peptide chain release factor RF-1 [Escherichia coli O103:H2 str. 12009] gi|257763972|dbj|BAI35467.1| peptide chain release factor RF-1 [Escherichia coli O111:H- str. 11128] gi|260449654|gb|ACX40076.1| peptide chain release factor 1 [Escherichia coli DH1] gi|281178397|dbj|BAI54727.1| peptide chain release factor 1 [Escherichia coli SE15] gi|281600635|gb|ADA73619.1| Peptide chain release factor 1 [Shigella flexneri 2002017] gi|284921023|emb|CBG34088.1| peptide chain release factor 1 [Escherichia coli 042] gi|290762109|gb|ADD56070.1| Peptide chain release factor 1 [Escherichia coli O55:H7 str. CB9615] gi|291324346|gb|EFE63768.1| peptide chain release factor 1 [Escherichia coli B088] gi|291426962|gb|EFE99988.1| peptide chain release factor 1 [Escherichia coli FVEC1412] gi|291434546|gb|EFF07519.1| peptide chain release factor 1 [Escherichia coli B185] gi|291470066|gb|EFF12550.1| peptide chain release factor 1 [Escherichia coli B354] gi|294493866|gb|ADE92622.1| peptide chain release factor 1 [Escherichia coli IHE3034] gi|298277839|gb|EFI19353.1| peptide chain release factor 1 [Escherichia coli FVEC1302] gi|300301228|gb|EFJ57613.1| peptide chain release factor 1 [Escherichia coli MS 185-1] gi|300304663|gb|EFJ59183.1| peptide chain release factor 1 [Escherichia coli MS 200-1] gi|300317504|gb|EFJ67288.1| peptide chain release factor 1 [Escherichia coli MS 175-1] gi|300359542|gb|EFJ75412.1| peptide chain release factor 1 [Escherichia coli MS 198-1] gi|300400374|gb|EFJ83912.1| peptide chain release factor 1 [Escherichia coli MS 69-1] gi|300401315|gb|EFJ84853.1| peptide chain release factor 1 [Escherichia coli MS 84-1] gi|300411045|gb|EFJ94583.1| peptide chain release factor 1 [Escherichia coli MS 45-1] gi|300421749|gb|EFK05060.1| peptide chain release factor 1 [Escherichia coli MS 182-1] gi|300449124|gb|EFK12744.1| peptide chain release factor 1 [Escherichia coli MS 116-1] gi|300455557|gb|EFK19050.1| peptide chain release factor 1 [Escherichia coli MS 21-1] gi|300463712|gb|EFK27205.1| peptide chain release factor 1 [Escherichia coli MS 187-1] gi|300526318|gb|EFK47387.1| peptide chain release factor 1 [Escherichia coli MS 119-7] gi|300530676|gb|EFK51738.1| peptide chain release factor 1 [Escherichia coli MS 107-1] gi|300839170|gb|EFK66930.1| peptide chain release factor 1 [Escherichia coli MS 124-1] gi|300846326|gb|EFK74086.1| peptide chain release factor 1 [Escherichia coli MS 78-1] gi|301073722|gb|EFK88528.1| peptide chain release factor 1 [Escherichia coli MS 146-1] gi|305852528|gb|EFM52976.1| peptide chain release factor 1 [Escherichia coli NC101] gi|306909752|gb|EFN40246.1| peptide chain release factor 1 [Escherichia coli W] gi|307553266|gb|ADN46041.1| peptide chain release factor 1 [Escherichia coli ABU 83972] gi|307627266|gb|ADN71570.1| peptide chain release factor 1 [Escherichia coli UM146] gi|308122207|gb|EFO59469.1| peptide chain release factor 1 [Escherichia coli MS 145-7] gi|308922915|gb|EFP68429.1| peptide chain release factor 1 [Shigella dysenteriae 1617] gi|309701510|emb|CBJ00817.1| peptide chain release factor 1 [Escherichia coli ETEC H10407] gi|310335995|gb|EFQ01195.1| peptide chain release factor 1 [Escherichia coli 1827-70] gi|312945841|gb|ADR26668.1| peptide chain release factor 1 [Escherichia coli O83:H1 str. NRG 857C] gi|313649400|gb|EFS13831.1| peptide chain release factor 1 [Shigella flexneri 2a str. 2457T] gi|315060462|gb|ADT74789.1| peptide chain release factor RF-1 [Escherichia coli W] gi|315135847|dbj|BAJ43006.1| peptide chain release factor 1 [Escherichia coli DH1] gi|315288568|gb|EFU47966.1| peptide chain release factor 1 [Escherichia coli MS 110-3] gi|315290789|gb|EFU50161.1| peptide chain release factor 1 [Escherichia coli MS 153-1] gi|315297345|gb|EFU56625.1| peptide chain release factor 1 [Escherichia coli MS 16-3] gi|315615947|gb|EFU96573.1| peptide chain release factor 1 [Escherichia coli 3431] gi|320181782|gb|EFW56692.1| Peptide chain release factor 1 [Shigella boydii ATCC 9905] gi|320188003|gb|EFW62670.1| Peptide chain release factor 1 [Escherichia coli O157:H7 str. EC1212] gi|320195779|gb|EFW70404.1| Peptide chain release factor 1 [Escherichia coli WV_060327] gi|320199250|gb|EFW73841.1| Peptide chain release factor 1 [Escherichia coli EC4100B] gi|320637363|gb|EFX07170.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. G5101] gi|320643225|gb|EFX12426.1| peptide chain release factor 1 [Escherichia coli O157:H- str. 493-89] gi|320648162|gb|EFX16838.1| peptide chain release factor 1 [Escherichia coli O157:H- str. H 2687] gi|320653996|gb|EFX22070.1| peptide chain release factor 1 [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659475|gb|EFX27044.1| peptide chain release factor 1 [Escherichia coli O55:H7 str. USDA 5905] gi|320664612|gb|EFX31763.1| peptide chain release factor 1 [Escherichia coli O157:H7 str. LSU-61] gi|323153190|gb|EFZ39452.1| peptide chain release factor 1 [Escherichia coli EPECa14] gi|323162264|gb|EFZ48122.1| peptide chain release factor 1 [Escherichia coli E128010] gi|323168381|gb|EFZ54062.1| peptide chain release factor 1 [Shigella sonnei 53G] gi|323179274|gb|EFZ64844.1| peptide chain release factor 1 [Escherichia coli 1180] gi|323185627|gb|EFZ70988.1| peptide chain release factor 1 [Escherichia coli 1357] gi|323378974|gb|ADX51242.1| peptide chain release factor 1 [Escherichia coli KO11] gi|323937932|gb|EGB34196.1| peptide chain release 1 [Escherichia coli E1520] gi|323942490|gb|EGB38658.1| peptide chain release [Escherichia coli E482] gi|323947506|gb|EGB43510.1| peptide chain release 1 [Escherichia coli H120] gi|323949672|gb|EGB45558.1| peptide chain release [Escherichia coli H252] gi|323953934|gb|EGB49733.1| peptide chain release [Escherichia coli H263] gi|323962789|gb|EGB58367.1| peptide chain release [Escherichia coli H489] gi|323973391|gb|EGB68578.1| peptide chain release [Escherichia coli TA007] gi|323977218|gb|EGB72305.1| peptide chain release [Escherichia coli TW10509] gi|324006000|gb|EGB75219.1| peptide chain release factor 1 [Escherichia coli MS 57-2] gi|324015639|gb|EGB84858.1| peptide chain release factor 1 [Escherichia coli MS 60-1] gi|324017539|gb|EGB86758.1| peptide chain release factor 1 [Escherichia coli MS 117-3] gi|324117241|gb|EGC11148.1| peptide chain release [Escherichia coli E1167] gi|325497513|gb|EGC95372.1| peptide chain release factor 1 [Escherichia fergusonii ECD227] gi|326342759|gb|EGD66529.1| Peptide chain release factor 1 [Escherichia coli O157:H7 str. 1044] gi|326346388|gb|EGD70125.1| Peptide chain release factor 1 [Escherichia coli O157:H7 str. 1125] gi|330911076|gb|EGH39586.1| peptide chain release factor 1 [Escherichia coli AA86] gi|331038539|gb|EGI10759.1| peptide chain release factor 1 [Escherichia coli H736] gi|331045281|gb|EGI17408.1| peptide chain release factor 1 [Escherichia coli M605] gi|331061036|gb|EGI33000.1| peptide chain release factor 1 [Escherichia coli TA143] gi|331065180|gb|EGI37075.1| peptide chain release factor 1 [Escherichia coli TA271] gi|331075680|gb|EGI46978.1| peptide chain release factor 1 [Escherichia coli H591] gi|331080331|gb|EGI51510.1| peptide chain release factor 1 [Escherichia coli H299] gi|332092251|gb|EGI97328.1| peptide chain release factor 1 [Shigella boydii 5216-82] gi|332098194|gb|EGJ03167.1| peptide chain release factor 1 [Shigella dysenteriae 155-74] gi|332101951|gb|EGJ05297.1| peptide chain release factor RF-1 [Shigella sp. D9] gi|332757864|gb|EGJ88191.1| peptide chain release factor 1 [Shigella flexneri 4343-70] gi|332759429|gb|EGJ89737.1| peptide chain release factor 1 [Shigella flexneri 2747-71] gi|332760305|gb|EGJ90595.1| peptide chain release factor 1 [Shigella flexneri K-671] gi|332767445|gb|EGJ97639.1| peptide chain release factor 1 [Shigella flexneri 2930-71] gi|333005050|gb|EGK24570.1| peptide chain release factor 1 [Shigella flexneri VA-6] gi|333005356|gb|EGK24874.1| peptide chain release factor 1 [Shigella flexneri K-218] gi|333007544|gb|EGK27022.1| peptide chain release factor 1 [Shigella flexneri K-272] gi|333019207|gb|EGK38494.1| peptide chain release factor 1 [Shigella flexneri K-304] gi|333019924|gb|EGK39196.1| peptide chain release factor 1 [Shigella flexneri K-227] Length = 360 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 114/344 (33%), Positives = 179/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ ++ + + Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + D+ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R+Y P V D R N+ +V++G LD ++ + + Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 349 >gi|188996904|ref|YP_001931155.1| peptide chain release factor 1 [Sulfurihydrogenibium sp. YO3AOP1] gi|188931971|gb|ACD66601.1| peptide chain release factor 1 [Sulfurihydrogenibium sp. YO3AOP1] Length = 360 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 122/346 (35%), Positives = 188/346 (54%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +++ L DP + ++ + + + +E + L ++ E + + +L Sbjct: 9 LESIEEKVKKLEELMADPEVLKDQSKIQSIAKEHKELSEILNLYNEYKKVSRQIEEVKQL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 D + + + L+ +K + E + + D + LE+ GAGG E+ Sbjct: 69 LNSTPDDDLRELAEEELESLKKQQEDLEKKIEIALLPKDPNDEKNVILEIRQGAGGDEAS 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R+AE+ +KTE L +H E+ GIK LIKG AY LK E GVHR+ Sbjct: 129 LFAAELFRMYQRYAERHGWKTEILSLHPTEKGGIKEVIALIKGKGAYSRLKYESGVHRVQ 188 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S+ R HTS ++ V P + ++IEI + +I+T RA GAGGQHVNTTDSAVR Sbjct: 189 RVPETESSGRIHTSTVTVAVLP-EAEEVDIEIKPEELKIETMRAGGAGGQHVNTTDSAVR 247 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPTG+VV CQ ERSQ +NK +A +LRA+L + +R E I + K ++G G + Sbjct: 248 ITHIPTGMVVTCQDERSQLQNKMKAMQILRARLKDYY--ERLEKEKIAKERKEQVGTGER 305 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P V D R N +D++DGDLD+ + +A + Sbjct: 306 SEKIRTYNF-PQNRVTDHRVNYTSYRINDIMDGDLDEIIDVLIAKE 350 >gi|147567|gb|AAA24519.1| peptide chain release factor 1 [Escherichia coli] Length = 360 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 113/344 (32%), Positives = 178/344 (51%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ ++ + + Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + D+ +I+ +D RIDT+R+SGAGGQHVNTT SA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTGSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R+Y P V D R N+ +V++G LD ++ + + Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 349 >gi|331701218|ref|YP_004398177.1| peptide chain release factor 1 [Lactobacillus buchneri NRRL B-30929] gi|329128561|gb|AEB73114.1| Peptide chain release factor 1 [Lactobacillus buchneri NRRL B-30929] Length = 360 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 110/351 (31%), Positives = 187/351 (53%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68 +FD + V R LN DP + + + L +E L + ++ K+ Q +L D Sbjct: 4 IFDKLQSVVDRYDELNELISDPEVIADTQKFMKLSKEEADLRDTVAAFKKYQKVSKQLDD 63 Query: 69 NLILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + +L +++D +++++ +L K + + L D + +E+H AGG Sbjct: 64 DKEMLREKIDDDLEAMVKDEITSLTDEKDKLEDQMKVMLLPKDPNDDKNIIMEIHGAAGG 123 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E +A L MY+++AE++ +K E ++ ++ E G K L+I G Y LK E G Sbjct: 124 DEGSLFAADLFSMYSKYAERQGWKVEIIDKNETEVGGFKEIVLMITGDKVYSKLKYENGA 183 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P ++ ++I+I D R+D YR+SGAGGQH+N T Sbjct: 184 HRVQRVPVTESAGRVHTSTATVGVMP-EEEDVDIDIDPKDIRVDVYRSSGAGGQHINKTS 242 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+VV Q ERSQ +N+ +A +L+A++Y+ Q+ E K+ IG Sbjct: 243 SAVRMTHLPTGIVVAMQDERSQQQNRQKAMKILKARVYDYYAQQ--EQDQYNAERKSAIG 300 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++G+LD+ + A + + Sbjct: 301 TGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIVSDQ 350 >gi|323490903|ref|ZP_08096098.1| peptide chain release factor 1 [Planococcus donghaensis MPA1U2] gi|323395383|gb|EGA88234.1| peptide chain release factor 1 [Planococcus donghaensis MPA1U2] Length = 359 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 107/351 (30%), Positives = 174/351 (49%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + R LN DP + + + + +E+ L + +E +D Sbjct: 1 MFDRLQSVEDRYDRLNELLSDPDIVSDTNKLRDYSKEQSDLQETVETYREYKDLTTQLTE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 + E+ D + + + + ++ +V + + D + +E+ AGG Sbjct: 61 AKAMFDEKMDADMREMVKEEVNELEQQVSVVEERLHKLLIPKDPNDDKNVIMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR+AE +K + ++ + G K +I G AY +K E G Sbjct: 121 DEAALFAGDLYRMYTRFAESNGWKIQVMDSNPTGLGGFKEIVFMITGKGAYSKMKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ P + +E++I E+D R DTY +SGAGGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLP-EVEEVEVDIHENDIRTDTYASSGAGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PT VV CQ E+SQ KNKA A +LRA++Y E ++E A K+ +G Sbjct: 240 SAVRLTHLPTNTVVTCQDEKSQIKNKASAMKVLRARVY--EKFQQEAQAEYDAVRKSAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L G +D+ + A + ++ Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKMDEIVDALIVEEQ 347 >gi|257467857|ref|ZP_05631953.1| peptide chain release factor 1 [Fusobacterium ulcerans ATCC 49185] gi|317062146|ref|ZP_07926631.1| bacterial peptide chain release factor 1 [Fusobacterium ulcerans ATCC 49185] gi|313687822|gb|EFS24657.1| bacterial peptide chain release factor 1 [Fusobacterium ulcerans ATCC 49185] Length = 358 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 118/347 (34%), Positives = 182/347 (52%), Gaps = 10/347 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R LN P + + + + + + KE + + D + E Sbjct: 5 LEEVVKRFDELNELLGSPEVLADPKKMMECNKSLSEITPIVEKYKEYKRVVEDFDFIKEN 64 Query: 76 ALEEDDCSILQETSDNLQRIKL----EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + L+ ++ + + L E D + +E+ GAGG E+ Sbjct: 65 LKTEKDQDMREMMHEELKELEESIPELEKELKVLLLPKDENDDKNVIIEIRGGAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AE++K+K E +E + GIK A I G AY LK E GVHR+ Sbjct: 125 LFAGNLFRMYSRYAERKKWKMEIIEKQEMGIGGIKEAVFSINGFGAYSRLKFESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P V+D E++I D +IDTYR+ GAGGQHVN TDSAVR Sbjct: 185 RVPETESAGRVHTSTATVAVLPEVEDVKEVKIDPRDLKIDTYRSGGAGGQHVNMTDSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG++VQCQ ERSQ KN+ +A L +KL+E+E +K+ + + + ++G G Sbjct: 245 ITHLPTGIIVQCQDERSQLKNREKAMKHLASKLFEMECEKQR--SQVESERRLQVGTGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R LDGDLD+ + A + + Sbjct: 303 SEKIRTYNY-PQGRITDHRIKFTVYQLEAYLDGDLDEMIDALITFSQ 348 >gi|184153097|ref|YP_001841438.1| peptide chain release factor 1 [Lactobacillus reuteri JCM 1112] gi|238058717|sp|B2G676|RF1_LACRJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|183224441|dbj|BAG24958.1| peptide chain release factor 1 [Lactobacillus reuteri JCM 1112] Length = 360 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 107/354 (30%), Positives = 182/354 (51%), Gaps = 12/354 (3%) Query: 10 LGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DR 65 + +FD R LN DP + + L +E L + + + Sbjct: 1 MEEIFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNQYKKVTQT 60 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAG 124 + D+ LL ++D ++ +E + + ++E + + + D + +E+ Sbjct: 61 ISDDEELLRETNDDDLTALTKEELAEAREEQAQLEKELEVLLIPKDPNDDKNIIMEIRGA 120 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG E+ +A L MY R+AEK+ +K E ++ ++ E G K L+I G Y LK E Sbjct: 121 AGGDEASLFAADLYNMYLRYAEKQGWKVEVVDRNETEVGGFKEIALMITGDKVYSKLKFE 180 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G HR+ R+ +S R HTS +++ V P + ++++I D R+D YR+SGAGGQHVN Sbjct: 181 NGAHRVQRVPVTESAGRVHTSTATVGVMP-EAEDVDVDIDPKDIRVDVYRSSGAGGQHVN 239 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T SAVR+TH+PTG+VV Q ERSQ +N+A+A +L++++Y+ +++E + + K Sbjct: 240 KTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYY--QQQEQSAYDQKRKD 297 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IG G +IR+Y P V D R + ++ GDLD+ ++A + + Sbjct: 298 AIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGDLDEIIEALIVADQ 350 >gi|78221601|ref|YP_383348.1| peptide chain release factor 1 [Geobacter metallireducens GS-15] gi|119361544|sp|Q39YQ1|RF1_GEOMG RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|78192856|gb|ABB30623.1| bacterial peptide chain release factor 1 (bRF-1) [Geobacter metallireducens GS-15] Length = 355 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 112/348 (32%), Positives = 179/348 (51%), Gaps = 9/348 (2%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + R L + P + N E + L RE L + + + L + Sbjct: 1 MFDKIEELEIRYQELESLLAVPTVIANQPEFRKLSREHNDLTGLVEAYRRYKKVLAEIEG 60 Query: 72 LLELALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 EL + + + E D ++ + + L D + LE+ AG GG ES Sbjct: 61 NRELLADPEMKEMAEAELEDLERQQEELEGEIKLLLLPKDPNDDRNVILEIRAGTGGDES 120 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY+R+AE+ ++K E + + E G K LI+G + LK E G HR+ Sbjct: 121 ALFAGDLFRMYSRFAERNRWKVEVMSASESERGGFKEVVALIEGQAVFAKLKYESGTHRV 180 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS ++ V P + IEI+I+ D +ID YRASGAGGQHVN T+SAV Sbjct: 181 QRVPETEAQGRIHTSACTVAVLP-EAEDIEIDINPVDLKIDVYRASGAGGQHVNKTESAV 239 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+VV+CQ ERSQ KN+++A +L++++ + Q++ A I K ++G G Sbjct: 240 RITHLPTGIVVECQDERSQIKNRSKAMKVLKSRILDGLQQEQN--ARIAADRKQQVGSGD 297 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + +++GD+ + + + A + Sbjct: 298 RSERIRTYNF-PQGRMTDHRIGLTLYRLDALMEGDIAEVVDSLRAHYQ 344 >gi|289450407|ref|YP_003475653.1| peptide chain release factor 1 [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184954|gb|ADC91379.1| peptide chain release factor 1 [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 366 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 119/347 (34%), Positives = 186/347 (53%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + R L+ DP L + +++E+ L + I++ + + L + Sbjct: 6 LEAVLNRYEELSAGLSDPSLLADRDRYLRVVKEQAGLTEIVGVIRDYIAKKDELAENLAM 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E DD + + ++ +K+++ + L D + YLE+ GAGG E+ Sbjct: 66 LQETDDEEMRLLLKEEIRDLKVKLPELEEKLQILLLPKDPRDEKNVYLEIRGGAGGEEAA 125 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A +L RMY +AE + FK E +E + E G+K I+G AY K E GVHR+ Sbjct: 126 LFAEVLFRMYQSYAESKHFKVEIVEWNATELGGLKEVVCSIQGSGAYSLFKYESGVHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS ++ V P D +++EI D IDTYR+SGAGGQHVN TDSA+R Sbjct: 186 RVPVTESGGRIHTSTVTVAVLP-EVDEVDVEILPGDITIDTYRSSGAGGQHVNKTDSAIR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIPTG+VV CQ +RSQ+KNK +A +LRAKLYE ++R +I E+ + ++G G Sbjct: 245 ITHIPTGIVVTCQDQRSQYKNKDRAMAVLRAKLYERAQEER--AGSIAEARRDQVGTGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + ++L G+LD ++ + ++ Sbjct: 303 SERIRTYNY-PQGRVTDHRIGLTVYKIDEILAGNLDLIIEPLMRAER 348 >gi|291612728|ref|YP_003522885.1| peptide chain release factor 1 [Sideroxydans lithotrophicus ES-1] gi|291582840|gb|ADE10498.1| peptide chain release factor 1 [Sideroxydans lithotrophicus ES-1] Length = 360 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 114/344 (33%), Positives = 176/344 (51%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +RL + +++ + L RER ++ + Q D E+ Sbjct: 9 LAQLSERLDEVTRLLSSEEATRDMDAFRRLNRERAEIEPVVDLYHAWQACEADIATAQEM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 A + D + + + Q + L D + +LEV AG GG E+ +A Sbjct: 69 AGDPDMREFAEAEIKAGRERLEQLEVDLQKQLLPKDPNDERNVFLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 + RMY R+AE+R+++ E + GE G K I G AY LK E G HR+ R+ Sbjct: 129 GDIFRMYVRFAERRRWQVEIISESPGEMGGYKEVIARIIGQGAYSVLKFESGAHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ + P D+ E+E++ ++ RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 189 ATETQGRIHTSACTVAILPEADEVGEVELNPAELRIDTFRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG VV+CQ RSQH+NKAQA +L A++ + Q++E + I K+ +G G + Sbjct: 249 LPTGTVVECQDGRSQHQNKAQAMRVLAARIKDK--QEQEAHSKIAAERKSLVGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ ++DGD+ + A +A + Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKMDQIMDGDISELTNALMAEHQ 349 >gi|148543687|ref|YP_001271057.1| peptide chain release factor 1 [Lactobacillus reuteri DSM 20016] gi|227363334|ref|ZP_03847463.1| peptide chain release factor 1 [Lactobacillus reuteri MM2-3] gi|227544508|ref|ZP_03974557.1| peptide chain release factor 1 [Lactobacillus reuteri CF48-3A] gi|300909304|ref|ZP_07126765.1| peptide chain release factor RF1 [Lactobacillus reuteri SD2112] gi|325682058|ref|ZP_08161576.1| peptide chain release factor RF1 [Lactobacillus reuteri MM4-1A] gi|148530721|gb|ABQ82720.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus reuteri DSM 20016] gi|227071641|gb|EEI09935.1| peptide chain release factor 1 [Lactobacillus reuteri MM2-3] gi|227185531|gb|EEI65602.1| peptide chain release factor 1 [Lactobacillus reuteri CF48-3A] gi|300893169|gb|EFK86528.1| peptide chain release factor RF1 [Lactobacillus reuteri SD2112] gi|324978702|gb|EGC15651.1| peptide chain release factor RF1 [Lactobacillus reuteri MM4-1A] Length = 362 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 107/355 (30%), Positives = 182/355 (51%), Gaps = 12/355 (3%) Query: 9 CLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---D 64 + +FD R LN DP + + L +E L + + + Sbjct: 2 EMEEIFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNQYKKVTQ 61 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHA 123 + D+ LL ++D ++ +E + + ++E + + + D + +E+ Sbjct: 62 TISDDEELLRETNDDDLTALTKEELAEAREEQAQLEKELEVLLIPKDPNDDKNIIMEIRG 121 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 AGG E+ +A L MY R+AEK+ +K E ++ ++ E G K L+I G Y LK Sbjct: 122 AAGGDEASLFAADLYNMYLRYAEKQGWKVEVVDRNETEVGGFKEIALMITGDKVYSKLKF 181 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G HR+ R+ +S R HTS +++ V P + ++++I D R+D YR+SGAGGQHV Sbjct: 182 ENGAHRVQRVPVTESAGRVHTSTATVGVMP-EAEDVDVDIDPKDIRVDVYRSSGAGGQHV 240 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SAVR+TH+PTG+VV Q ERSQ +N+A+A +L++++Y+ +++E + + K Sbjct: 241 NKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYY--QQQEQSAYDQKRK 298 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IG G +IR+Y P V D R + ++ GDLD+ ++A + + Sbjct: 299 DAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGDLDEIIEALIVADQ 352 >gi|87122989|ref|ZP_01078849.1| peptide chain release factor 1 [Marinomonas sp. MED121] gi|86161726|gb|EAQ63031.1| peptide chain release factor 1 [Marinomonas sp. MED121] Length = 363 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 117/348 (33%), Positives = 180/348 (51%), Gaps = 9/348 (2%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 +N R L D + N + +E L+ + +E Q+ + Sbjct: 7 LKLENLADRYEELAALLSDAEIIMNQDLFRAYSKEYAELEPVVKCFEEFQENDENLEEAQ 66 Query: 74 ELALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + D + R + + Q L D + ++EV AG GG E+ Sbjct: 67 LMMTDSDPDIKEMGVEEMKASQIRKEELLLDLQKLLLPKDPNDGRNVFVEVRAGTGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY+R+AE +++K E + ++GE G K I G AY LK E GVHR+ Sbjct: 127 SIFAGDLFRMYSRYAETQRWKVELISCNEGEHGGYKEVIARIVGEGAYSLLKFESGVHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS ++ + P +D+ IEI+++D R+DT+RASGAGGQHVN TDSA+ Sbjct: 187 QRVPATESQGRIHTSACTVAIMPEMDEQDAIEINKADLRVDTFRASGAGGQHVNKTDSAI 246 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+THIPTGVVV+CQ ERSQHKN+A+A +L ++L E + A E+ K+ +G G Sbjct: 247 RLTHIPTGVVVECQDERSQHKNRAKAMALLASRLQAAEE--EKHAAEQSETRKSLVGSGD 304 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +++ GDLD+ ++ + + Sbjct: 305 RSERIRTYNY-PQGRVTDHRINLTLYKLDEIITGDLDNLVQPLINEHQ 351 >gi|311745348|ref|ZP_07719133.1| peptide chain release factor 1 [Algoriphagus sp. PR1] gi|126577889|gb|EAZ82109.1| peptide chain release factor 1 [Algoriphagus sp. PR1] Length = 358 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 116/350 (33%), Positives = 180/350 (51%), Gaps = 12/350 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN-- 69 + D +R + P ++ + L +E + L+ +S E L + Sbjct: 1 MLDKLQALKERFEEVGQLIILPDSMADMSKYAKLTKEYKDLEKIVSAYDEYSLVLQNITS 60 Query: 70 -LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGG 127 +L+ + + + + D L+ K E+E + + + DS D LE+ G+GG Sbjct: 61 SKEMLDKEKDPEFREMAKLEIDELRSRKDELEEELKQLLIPKDPNDSKDCILEIRGGSGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY R+ E + +K L++ G G K + G + YG LK E GV Sbjct: 121 DEASIFAGDLFRMYERFCEMQGWKLTVLDLTFGSAGGYKEIIATVSGADVYGMLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +S+ V P D +E+ + +D R DTY +SG GGQ VNTT Sbjct: 181 HRVQRVPATESQGRVHTSAASVAVLP-EMDEVEVHLDMNDVRKDTYCSSGPGGQSVNTTY 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+VV CQ E+SQ KN +A +LR++LYE+EL K E ++G K+ +G Sbjct: 240 SAVRLTHNPTGLVVTCQDEKSQIKNFEKALKVLRSRLYEIELAKHNE--SVGAQRKSMVG 297 Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 G + IR+Y V D R N + DV+DG +++F+ A + Sbjct: 298 SGDRSDKIRTYNYS-QSRVTDHRINKTVYNLPDVMDGHIEEFISALRLAE 346 >gi|238783270|ref|ZP_04627295.1| Peptide chain release factor 1 [Yersinia bercovieri ATCC 43970] gi|238715863|gb|EEQ07850.1| Peptide chain release factor 1 [Yersinia bercovieri ATCC 43970] Length = 360 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 117/337 (34%), Positives = 175/337 (51%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + KE + D + Sbjct: 9 LEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSAQEDIEAAEMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE R + + Q L D D +LE+ AG GG E+ +A Sbjct: 69 LDDLEMREMAQEELKEAKARSEELEQQLQLLLLPKDPDDERDCFLEIRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 + RMY+R+AE R++K E + +GE G K + G A+G LK E G HR+ R+ Sbjct: 129 GDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGEGAFGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ EI+ D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR+ + +G G + Sbjct: 249 IPTGLVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQ--LAEASERRNLLGTGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ +V++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQ 342 >gi|330828702|ref|YP_004391654.1| peptide chain release factor 1 [Aeromonas veronii B565] gi|328803838|gb|AEB49037.1| Peptide chain release factor 1 [Aeromonas veronii B565] Length = 362 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 115/341 (33%), Positives = 180/341 (52%), Gaps = 9/341 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R + +P + + + L RE L++ + + + D + Sbjct: 9 LEGLIERHEEVQAMLGEPDVVSDQDRYRALTREYAQLEDIVHAFQRYRQAQDDLETTQMM 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + ++ + Q L D N+ YLE+ AGAGG E+ Sbjct: 69 LEEDDADLREMAQEELPLAKANLEALEQELQLMLLPKDPKDDNNCYLEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE++ ++ + +DGE G K I G YG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRFAERQGWRVSIVSCNDGEYGGYKEVIAKIDGERVYGRLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P V ++ +IEI+ SD +IDT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRVHTSACTVAVLPEVPEAEQIEINPSDLKIDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ ERSQHKN+A+A ++L A+L E ++ + + +G G Sbjct: 249 THLPTGLVVECQDERSQHKNRAKAMSVLSARLQAAEDERHRAAEQ--STRRNLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P + + R N+ S++L+GDLD + Sbjct: 307 ERIRTYNY-PQGRLSEHRINLTLYRLSEILEGDLDCVITPL 346 >gi|257452575|ref|ZP_05617874.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_5R] gi|257466434|ref|ZP_05630745.1| peptide chain release factor 1 [Fusobacterium gonidiaformans ATCC 25563] gi|315917590|ref|ZP_07913830.1| peptide chain release factor 1 [Fusobacterium gonidiaformans ATCC 25563] gi|317059115|ref|ZP_07923600.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_5R] gi|313684791|gb|EFS21626.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_5R] gi|313691465|gb|EFS28300.1| peptide chain release factor 1 [Fusobacterium gonidiaformans ATCC 25563] Length = 359 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 123/352 (34%), Positives = 181/352 (51%), Gaps = 12/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + V R L+T P + + + + L I KE + D Sbjct: 1 MFDKLEEVVARYEELHTLLSSPEVLNDPKKMIECNKNLNALTPLIEKYKEYKAVKDDVEF 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127 + E E D + + L+ + ++ + E D N+ +E+ GAGG Sbjct: 61 IKESLKTEKDEDMRSMMQEELKENEEQMPELEKELKILLLPKDPNDDNNVIVEIRGGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNAYGWLKGEQG 186 E+ +A L RMY R+AE++K+K E +E D E G+K I+G AY LK E G Sbjct: 121 DEAAIFAGDLFRMYCRYAERKKWKIEIIEKQDLEGLDGLKEVAFSIQGFGAYSKLKFESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S R HTS +++ V P V+D E+ I D +IDTYR+ GAGGQHVN T Sbjct: 181 VHRVQRVPKTESAGRIHTSTATVAVLPEVEDITEVHIDPKDLKIDTYRSGGAGGQHVNMT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PTGV+VQCQ ERSQ KN+ +A L +KL E+E++K+ + ++ Sbjct: 241 DSAVRITHLPTGVIVQCQDERSQLKNREKAMKHLASKLLEMEVEKQRSEIEG--ERRLQV 298 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P + D R + LDGDLD+ + A + + Sbjct: 299 GTGDRAEKIRTYNF-PQGRITDHRIKLTVHQLEAFLDGDLDEMIDALITFSQ 349 >gi|325474790|gb|EGC77976.1| peptide chain release factor 1 [Treponema denticola F0402] Length = 361 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 119/347 (34%), Positives = 182/347 (52%), Gaps = 12/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 DN +RL + + E+P+L ++V + K MRE +L + L Sbjct: 5 LDNLRKRLVEVEKEVENPNLIKDVAKYKETMREHSYLSKLMEEYDNYLSIEKQIEDSKLL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 EE D + + + L ++ E + + + + +E+ G GG E+ Sbjct: 65 IQEESDAELKEMAREELHSLEAAFEKSEADLKMLLIPPDPLEEKNIIMEIRGGTGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYT +AE + +K E L +++ E G K T I G YG L+ E GVHR+ Sbjct: 125 LFAADLFRMYTHYAEMKNWKYEVLSLNETELGGYKEITFSISGKYVYGSLRYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ + + R HTS ++ V P +++ I++ D RID RA G GGQ VNTTDSAVR Sbjct: 185 RVPETEGSGRIHTSAVTVAVLPEAEETEIE-INQEDLRIDVMRAGGPGGQCVNTTDSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIPTG+VV CQ E+SQ KNKA+A +LR++LY+LE K++ ++ K+++G G Sbjct: 244 ITHIPTGLVVICQDEKSQIKNKAKAMRVLRSRLYDLEESKKQAER--AQNRKSQVGSGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA-TLAIK 354 +IR+Y P V D R N+ V+ G LD+ + A +A + Sbjct: 302 SERIRTYNF-PQNRVTDHRINLTLYKLDSVMQGSLDELIDALCIAAR 347 >gi|225874213|ref|YP_002755672.1| peptide chain release factor 1 [Acidobacterium capsulatum ATCC 51196] gi|254790854|sp|C1F2J1|RF1_ACIC5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|225791643|gb|ACO31733.1| peptide chain release factor 1 [Acidobacterium capsulatum ATCC 51196] Length = 358 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 101/347 (29%), Positives = 177/347 (51%), Gaps = 11/347 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + R L + DP L + + + ++ + L++ + +E ++ Sbjct: 1 MFERLEQIETRYEELGREMADPALIADQQKYQKTAKQHRELEDVVEKFREYREVQNGIAD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 + E D + + + L D + +E+ AG GG Sbjct: 61 ARGMMNEADAEIRAMAEEELASLEERLPQIEADLKLLLLPKDPNDEKNVVVEIRAGTGGD 120 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A + RMY R+AE+R++K E L + + G K +I+G + Y +K E GVH Sbjct: 121 EASLFAAEVFRMYARYAEQRRWKVEVLSMSESSVGGAKEVIAIIEGDHVYSQMKYESGVH 180 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ ++ R HTS ++ V P + ++++I D RIDT+ +SG GGQ VNTT S Sbjct: 181 RVQRVPATETQGRVHTSAITVAVLP-EAEEVDVKIEAKDLRIDTFCSSGPGGQSVNTTYS 239 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PT VV CQ E+SQ KN+ +A +LR++LYE+E++++++ + + K ++G Sbjct: 240 AVRITHLPTNTVVSCQDEKSQIKNREKAMRVLRSRLYEVEMERQQQ--ALAKERKQQVGS 297 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G +IR+Y P + D R + ++V++G L + A A Sbjct: 298 GDRSEKIRTYNF-PQNRLTDHRIGLTIHQLAEVMEGRLQPVIDALTA 343 >gi|260063027|ref|YP_003196107.1| peptide chain release factor 2 [Robiginitalea biformata HTCC2501] gi|88784596|gb|EAR15766.1| peptide chain release factor 2 [Robiginitalea biformata HTCC2501] Length = 313 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 143/308 (46%), Positives = 204/308 (66%), Gaps = 2/308 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ L + + + L D +++E + +E +F Sbjct: 1 MKRLDTLKGWVEEFETAESLLSDLEVMVEFHEAGEVAEEEVARHLKRAT--DAIEKLEFR 58 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++LS E D A L++ AGAGGTES DWA+ML+RMY W+EK +K L +G+ AGI Sbjct: 59 NMLSDEGDDLTAVLQITAGAGGTESCDWASMLMRMYMMWSEKNGYKVRELNYQEGDVAGI 118 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ TL I+GP A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+ DDSIEIEI+ Sbjct: 119 KTVTLEIEGPFAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDSIEIEINP 178 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D I T R+SGAGGQ+VN ++ V++ H PTG+ + C RSQH N+A A ML+++LY Sbjct: 179 ADIEITTARSSGAGGQNVNKVETKVQLVHKPTGIQISCSDSRSQHDNRATALKMLKSQLY 238 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+K++E ESSK +I WG QIR+YV+ PY++VKD+RT E + V+DG+++D Sbjct: 239 EIELRKKQEAREAIESSKMKIEWGSQIRNYVMHPYKLVKDVRTGEETGNVDAVMDGEIND 298 Query: 346 FMKATLAI 353 F+KA L + Sbjct: 299 FLKAFLMM 306 >gi|298245470|ref|ZP_06969276.1| peptide chain release factor 1 [Ktedonobacter racemifer DSM 44963] gi|297552951|gb|EFH86816.1| peptide chain release factor 1 [Ktedonobacter racemifer DSM 44963] Length = 358 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 119/344 (34%), Positives = 184/344 (53%), Gaps = 5/344 (1%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R LN P + ++ + RE+ L + E+ D E+ Sbjct: 7 LATLATRYEELNNLMAQPDVLTDISLLQRYGREQSELSTVVEKYHELIDTDKQIKEAQEM 66 Query: 76 ALEED---DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+ +E R + +E Q L D +A + + GAGG E+ Sbjct: 67 YDSEEGELRDMAFEELEQLKARKEQLLEDVQVALLPKDIMDEKNAVVTIQGGAGGDEAAL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+A+ R++K E L+ +D E+ G K T +I+G AY +K E G HR+ R Sbjct: 127 FAADLFRMYSRYADGRRWKIEILDGNDTEQGGFKDITFVIRGKGAYSRMKYEGGTHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++N R HTS + + V P DD I+IE+ ++D R+D YR++G GGQ VNTTDSAVRI Sbjct: 187 VPSTEANGRIHTSTAKVIVLPEADDDIQIEVKDADIRVDVYRSTGHGGQSVNTTDSAVRI 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQ 311 TH+PTG+VV CQ E+SQ KNK +A N+L+++L++LE KR+E S+ + G + Sbjct: 247 THLPTGLVVTCQDEKSQLKNKQKALNVLKSRLWDLEEAKRQEELGKARRSQVQTGDRSEK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R + + + +LDG LD+F+ + + + Sbjct: 307 IRTYNF-PQDRVTDHRIGLTRHNLPGILDGSLDEFIDNLITVDQ 349 >gi|209694372|ref|YP_002262300.1| peptide chain release factor 1 [Aliivibrio salmonicida LFI1238] gi|238058709|sp|B6EHH5|RF1_ALISL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|208008323|emb|CAQ78475.1| peptide chain release factor 1 [Aliivibrio salmonicida LFI1238] Length = 362 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 116/339 (34%), Positives = 181/339 (53%), Gaps = 9/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R + DP + + + + L RE L+ + + D + E+ Sbjct: 9 LETLVERYEEVQHLLGDPGVIGDQNKFRALSREYSQLEEVTQCFQAYEKVQEDLVAAQEM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 A E+D + + + Q + D + +LE+ AGAGG E+ Sbjct: 69 AQEDDAEMREMAQDEIKEAKEASERLTDELQVLLIPKDPNDERNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AEK+ ++ E + H E+ G K + G AYG LK E G HR+ R Sbjct: 129 FAGNLFRMYSRFAEKKGWRIEVMSSHASEQGGFKEMIAKVSGDGAYGILKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS +I V + ++ EI SD +IDT+R+SGAGGQHVNTTDSA+RI Sbjct: 189 VPETESQGRVHTSACTIAVMAEIPEADLPEIKSSDLKIDTFRSSGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG VV+CQ ERSQHKNKA+A ++L A++ + E +R + + ++ + +G G Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMSVLAARIIQAEEARRAAV--VSDTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +IR+Y P V D R N+ ++V++GDL ++ Sbjct: 307 DRIRTYNY-PQSRVSDHRINLTIYRLNEVMEGDLAALIE 344 >gi|968930|gb|AAC43437.1| peptide chain release factor 1 [Escherichia coli] Length = 360 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 113/344 (32%), Positives = 179/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ ++ + + Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R+Y P V D R N+ +V++G LD ++ + + Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 349 >gi|124265716|ref|YP_001019720.1| peptide chain release factor 1 [Methylibium petroleiphilum PM1] gi|166223569|sp|A2SD46|RF1_METPP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|124258491|gb|ABM93485.1| bacterial peptide chain release factor 1 (bRF-1) [Methylibium petroleiphilum PM1] Length = 359 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 124/345 (35%), Positives = 188/345 (54%), Gaps = 7/345 (2%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D V+RL+ L++ DP + ++ + L RE + + + R D Sbjct: 7 LQLDRYVRRLAELDSLLADPAVMRDAGGFRALSREHVEVSGIVERQRRHAQRERDLAAAA 66 Query: 74 ELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+A + + ++ E + + Q Q L D+ +LE+ AG GG ES Sbjct: 67 EMASDPELAAMAAEEAASAQAELDRLATELQRLLLPRDPDDARSVFLEIRAGTGGDESAL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A LLRMYTR+AE++ ++ E L D E G K I+G +G LK E G HR+ R Sbjct: 127 FAGDLLRMYTRYAERKGWRVELLSASDSELGGYKEVVARIEGDAVFGHLKYESGGHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V D++ E+ ++ +D RIDTYRASGAGGQHVN TDSAVRI Sbjct: 187 VPATETQGRIHTSACTVAVLAEPDEAQEVTLNPADLRIDTYRASGAGGQHVNKTDSAVRI 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+V +CQ +RSQH+NKA+A +L A+L + + +R+ A + K+ IG G Sbjct: 247 THLPTGLVAECQDDRSQHRNKAKAMAVLAARLRDKDRLERQ--AREAATRKSLIGSGDRS 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D R N+ ++DGDLD +KA +A + Sbjct: 305 DRIRTYNF-PQGRLTDHRINLTLYQLGAIMDGDLDPVVKALVAAR 348 >gi|158317542|ref|YP_001510050.1| peptide chain release factor 2 [Frankia sp. EAN1pec] gi|158112947|gb|ABW15144.1| peptide chain release factor 2 [Frankia sp. EAN1pec] Length = 386 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 144/337 (42%), Positives = 204/337 (60%), Gaps = 4/337 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D + +R L + DP LW + A+ + R + I ++ + Sbjct: 32 LDATLAGIATVLDVEGLRRRAQALEQEAADPDLWSDQDRAQAVTRRLSAVKGDIGRVEGL 91 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + RL D + L+ D +L E + +L + ++ + +LLSGE D DA +++ Sbjct: 92 RRRLDDLIAA----LDLGDDDLLTEAAADLPALARDISTLEVRTLLSGEYDERDAIVQLS 147 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGG ++ DW MLLRMY RWAE+ + TE + + EEAG+KSAT +K P AYG L+ Sbjct: 148 AGAGGVDAADWTAMLLRMYLRWAERHGYATEVFDTSEAEEAGLKSATFQVKCPYAYGTLR 207 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHRLVRISP+D+ +RR TSF+ + V P V+ S ++I E + RID +R+SG GGQ Sbjct: 208 SEHGVHRLVRISPFDNQNRRQTSFAGVEVTPAVEVSDHVDIDEKELRIDIFRSSGPGGQG 267 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PT +VV CQ ERSQ +NKA A +L+AKL E + Sbjct: 268 VNTTDSAVRITHLPTNIVVTCQNERSQLQNKAAAMMVLQAKLLERRRAEEAAEKQRLTGG 327 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 ++ +G QIR+YVL PYQMVKDLRT +E ++ + VL Sbjct: 328 PQDVSFGSQIRNYVLHPYQMVKDLRTEVETSNTNAVL 364 >gi|332342793|gb|AEE56127.1| peptide chain release factor protein PrfA [Escherichia coli UMNK88] Length = 360 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 114/344 (33%), Positives = 178/344 (51%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ ++ + + Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + D+ +I +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDIKPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R+Y P V D R N+ +V++G LD ++ + + Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 349 >gi|332295519|ref|YP_004437442.1| Peptide chain release factor 1 [Thermodesulfobium narugense DSM 14796] gi|332178622|gb|AEE14311.1| Peptide chain release factor 1 [Thermodesulfobium narugense DSM 14796] Length = 361 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 128/343 (37%), Positives = 183/343 (53%), Gaps = 10/343 (2%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLE 74 + R +N + N + L +E+ L+ ++ E+ ++ L D L Sbjct: 12 KLINRYKEINELLSSLEIINNPSKLISLSQEKAELEEVVNNYNELNKLKNYLSDLKELKN 71 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 EE +E + I+ L D + LE+ AGAGG E+ +A Sbjct: 72 SEDEEIKALAEEEFQVVEKNIENLESKLLNFILPKDPLDEKNIILEIRAGAGGEEAALFA 131 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 + LLRMY R+AE++ KTE L I++ GIK A + IKG Y LK E G HR+ R+ Sbjct: 132 SELLRMYLRYAERKNAKTEILSINETGIGGIKEAIISIKGKRIYSRLKFESGTHRVQRVP 191 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P D I+I I E D +IDT+RA GAGGQHVN TDSAVRITH Sbjct: 192 ETESGGRIHTSTATVAVLP-EADEIDITIDEKDLKIDTFRAGGAGGQHVNKTDSAVRITH 250 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV CQ ERSQ +NK +A +L AK+ LE ++ I S + ++G G + Sbjct: 251 LPTGIVVACQDERSQFQNKEKAMRILAAKI--LEEKRVASEKEIAMSRRIQVGSGDRSEK 308 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P V D R N+ ++VLDGDLD+ + A +A + Sbjct: 309 IRTYNF-PQGRVTDHRINLTLYRLNEVLDGDLDEIIDALIAAE 350 >gi|296327945|ref|ZP_06870480.1| peptide chain release factor RF1 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154901|gb|EFG95683.1| peptide chain release factor RF1 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 365 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 122/359 (33%), Positives = 185/359 (51%), Gaps = 13/359 (3%) Query: 7 LNCLGG--LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + L G +FD + V R LN P + + + + + + KE + Sbjct: 1 MINLRGVKMFDKLEEVVARYDELNKMLVSPEVLADSKKMIECNKAINEITEIVEKYKEYK 60 Query: 64 DRLCDNLILLELALEEDDCSILQE----TSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + D + E E D + + + +++ E + L + D + + Sbjct: 61 KYVDDIEFIKESFKTEKDSDMKEMLNEELKEAEEKLPKLEEELKILLLPKDKNDDKNVIV 120 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 E+ GAGG E+ +A L RMY+R+AE++K+K E +E DGE GIK I G AY Sbjct: 121 EIRGGAGGDEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELGGIKEIAFTIIGLGAYS 180 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 LK E GVHR+ R+ +++ R HTS +++ V P V+D E+ + D +IDTYR+ GAG Sbjct: 181 RLKFESGVHRVQRVPKTEASGRIHTSTATVAVLPEVEDIQEVTVDPKDLKIDTYRSGGAG 240 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQHVN TDSAVRITH+PTG+VVQCQ ERSQ KN+ +A L KLYE+E +K+ Sbjct: 241 GQHVNMTDSAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQRSEVE-- 298 Query: 300 ESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + ++G G +IR+Y P + D R + LDGD+D+ + A + + Sbjct: 299 SERRLQVGTGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQ 356 >gi|304415271|ref|ZP_07395967.1| peptide chain release factor 1 [Candidatus Regiella insecticola LSR1] gi|304282877|gb|EFL91344.1| peptide chain release factor 1 [Candidatus Regiella insecticola LSR1] Length = 360 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 118/337 (35%), Positives = 182/337 (54%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +R + D + + + + L RE L + K+ D ++ Sbjct: 9 LQALQERYEEVEAHLGDAEVISDQLRFRTLSREYAQLKDISLCFKQWDGLQEDIETAKKM 68 Query: 76 ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ + + + Q L D D +LE+ AG GG E+ +A Sbjct: 69 LDDLEMRELAQDELKEAKIRSEALEQKLQVLLLPQDPDDERDCFLEIRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 + RMY+R+AE R++K E + I++GE+ G K I G YG LK E G HR+ R+ Sbjct: 129 GDMFRMYSRYAETRRWKMEVININEGEKGGYKEVITKITGNGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V PV+ ++ +EIS++D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 KTESQGRIHTSACTVAVMPVLPETEVLEISDNDLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ E E QKR++ + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKAKSVLAARIREAERQKRQQTQ--ASERRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ +V++G LD ++ Sbjct: 307 SRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDILIE 342 >gi|317153066|ref|YP_004121114.1| peptide chain release factor 1 [Desulfovibrio aespoeensis Aspo-2] gi|316943317|gb|ADU62368.1| peptide chain release factor 1 [Desulfovibrio aespoeensis Aspo-2] Length = 355 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 112/346 (32%), Positives = 177/346 (51%), Gaps = 11/346 (3%) Query: 13 LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F ++ + L + P ++ + K + + L + + +E + D Sbjct: 1 MFGKLEDIEIKYDKLEYELAQPGIFNDQERYKKVSKAHSDLSDVVVLYREYKKCSKDLAE 60 Query: 72 LLELALEEDDCSILQ---ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 E++ + D E S+ RI+ E + L S D + LE+ AG GG Sbjct: 61 NREMSHDPDPEIREMAKAEISELEDRIETLEEKIKILLLPSDPMDEKNIILEIRAGTGGD 120 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMYTR+AE ++K E + + G+K I G Y LK E G H Sbjct: 121 EAGLFAADLYRMYTRYAEANRWKVEEMSSNVTGSGGLKEVIASIAGDKVYSKLKYESGTH 180 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS ++ + P + ++I++ D R+D +R+SG GGQ VNTTDS Sbjct: 181 RVQRVPATESQGRIHTSVVTVAIMP-EAEEVDIDLRPEDVRVDVFRSSGPGGQSVNTTDS 239 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 A+R+THIPTG++V CQ E+SQHKNKA+A +LR++L +LE K A + + ++G Sbjct: 240 AIRVTHIPTGMIVICQDEKSQHKNKAKALKVLRSRLLQLEQDK--AKAEEDAARRIQVGS 297 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G +IR+Y P V D R N+ +L+G+LDD A + Sbjct: 298 GDRSERIRTYNF-PQGRVSDHRINLTLHKLPQILEGELDDLTDALI 342 >gi|124515209|gb|EAY56720.1| Peptide chain release factor 1 [Leptospirillum rubarum] Length = 361 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 117/344 (34%), Positives = 186/344 (54%), Gaps = 8/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R ++ K DP + +N L R++ L +S + + L EL Sbjct: 14 LESMRERYREISGKMADPEVSRNPAIYMKLARDQSELSAIVSLYEHYLRIIDQQKDLQEL 73 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134 + + ++ + L +VE + +S+ E DS + +LE+ AGAGG E+ +A Sbjct: 74 RQDPEFLDLVPQEEKKLSLELQDVESRLLDSILPRDERDSRNLFLEIRAGAGGEEAALFA 133 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+ E++ F+ E +E +D E G + + ++G A+ LK E GVHR+ R+ Sbjct: 134 RELARMYLRFIERKGFRFEVMETNDTEIGGARETIIYVQGHGAFSQLKFESGVHRVQRVP 193 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ + P ++++I D RIDT+ AS AGGQ VNTT SAVRITH Sbjct: 194 VTEAGGRIHTSTVTVAMIP-EASEVDVQIDPKDLRIDTFCASSAGGQSVNTTYSAVRITH 252 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PT +VV CQ ERSQ KNKA+A +LRA+L E E ++ E I K+++G G + Sbjct: 253 LPTNIVVSCQDERSQLKNKAKAMKVLRARLMEKEQTRQNE--QIASDRKSQVGTGDRSER 310 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R + V++G++D F+ A A ++ Sbjct: 311 IRTYNF-PQNRVTDHRIGMTLYQLDQVMEGNIDPFVDALRAQER 353 >gi|227510126|ref|ZP_03940175.1| peptide chain release factor 1 [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190331|gb|EEI70398.1| peptide chain release factor 1 [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 357 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 108/352 (30%), Positives = 181/352 (51%), Gaps = 13/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68 +FD V R LN DP + + L +E L + ++ + + +L D Sbjct: 4 IFDKLQAVVDRYDELNELISDPEVIADTQRFMKLSKEEGELRDTVAAYNKYKEVSKQLDD 63 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAG 126 + +L +++ D + + + + + Q + + D + +E+H AG Sbjct: 64 DEEMLREKIDDADLESMVKDEISDFKDQKAKLEDQLKVMLLPKDPNDEKNIIMEIHGAAG 123 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E +A L MY+++AE++ +K E ++ + E G K L+I G Y LK E G Sbjct: 124 GDEGSLFAADLFSMYSKYAERQGWKVEVIDKSETEVGGFKEIVLMITGDKVYSKLKYENG 183 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P ++ ++I+I D R+D YR+SGAGGQH+N T Sbjct: 184 AHRVQRVPVTESAGRVHTSTATVGVMP-EEEDVDIDIDPKDIRVDVYRSSGAGGQHINKT 242 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+TH+PTG+VV Q ERSQ +N+A+A +L+A++Y+ Q+ E K+ I Sbjct: 243 SSAVRMTHLPTGIVVAMQDERSQQQNRAKAMKILKARVYDYYAQQ--EQDQYNAERKSAI 300 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R + +++G+LDD + A + + Sbjct: 301 GTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMNGELDDIVDALILSDQ 351 >gi|167750775|ref|ZP_02422902.1| hypothetical protein EUBSIR_01753 [Eubacterium siraeum DSM 15702] gi|167656210|gb|EDS00340.1| hypothetical protein EUBSIR_01753 [Eubacterium siraeum DSM 15702] gi|291530723|emb|CBK96308.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium siraeum 70/3] gi|291557765|emb|CBL34882.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium siraeum V10Sc8a] Length = 358 Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats. Identities = 105/348 (30%), Positives = 174/348 (50%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R +N K D ++ + + K LM+E ++L I + + D ++ Sbjct: 5 LEITEKRFDEINEKLTDINVINDQEQYKSLMKELKNLTPIIEKYRMYKTARSDFEEAEQM 64 Query: 76 ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + +E + + + L D + +E+ GAGG E+ Sbjct: 65 LSDGGLDKDFKEIVQEQYESNKKLMDEYTDELKILLLPKDPDDDRNVIIEIRGGAGGEEA 124 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +AN + RMY+ +A+ + +KTE + + E G K + ++G Y LK E GVHR+ Sbjct: 125 ALFANSMFRMYSMYAQTKGWKTEVISSNPTELGGYKEISFSVEGEGVYAKLKYESGVHRV 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R TS ++ V P + +++EI+ +D TYR+SGAGGQH+N T+SA+ Sbjct: 185 QRVPETEAQGRIQTSTITVAVLP-EVEEVDVEINPADLEFQTYRSSGAGGQHINKTESAI 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H PTGVVV+CQ+ERSQ+KNK +A ML +KLYE +L ++ + I K ++G G Sbjct: 244 RIIHHPTGVVVECQEERSQYKNKDKAMKMLYSKLYEAKLNEQN--SKIAAERKIQVGTGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + ++GD D+ A + Sbjct: 302 RSERIRTYNY-PQSRVTDHRIGLTLYKLEQFMNGDCDEVFDALAIADR 348 >gi|307546434|ref|YP_003898913.1| peptide chain release factor 2 [Halomonas elongata DSM 2581] gi|307218458|emb|CBV43728.1| peptide chain release factor 2 [Halomonas elongata DSM 2581] Length = 301 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 167/299 (55%), Positives = 214/299 (71%), Gaps = 1/299 (0%) Query: 55 AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114 + I ++ L DN LLELA E+D + E S L+ ++ ++E +F + +GE D Sbjct: 2 VVDTIDTLERGLNDNRDLLELAEMEEDADTVDEVSRELESLRADLEKLEFRRMFAGEMDP 61 Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 N+AYL++ AG+GGTE+QDWANMLLRMY RWAE FK + +E+ GE AGIKSAT+ I+G Sbjct: 62 NNAYLDIQAGSGGTEAQDWANMLLRMYLRWAEHHGFKADLIELSAGEVAGIKSATVHIQG 121 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 A+GWL+ E GVHRLVR SP+DS RRHTSF+S+++ P VDDS E+EI+ SD R+DTYR Sbjct: 122 EYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFASVFLSPEVDDSFEVEINPSDLRVDTYR 181 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 +SGAGGQHVNTTDSAVRITH PTG+VV CQ +RSQH N+ A LRAKL+E E+ KR Sbjct: 182 SSGAGGQHVNTTDSAVRITHEPTGIVVACQSQRSQHANRDFAMKQLRAKLWEHEMDKRNA 241 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 E SK +IGWG QIRSYVL +KDLRT ++ +S VLDGDLD F++A+L Sbjct: 242 AKQAAEDSKADIGWGSQIRSYVLDDQ-RIKDLRTGVQSSSCEKVLDGDLDQFIEASLKQ 299 >gi|312879994|ref|ZP_07739794.1| bacterial peptide chain release factor 1 (bRF-1) [Aminomonas paucivorans DSM 12260] gi|310783285|gb|EFQ23683.1| bacterial peptide chain release factor 1 (bRF-1) [Aminomonas paucivorans DSM 12260] Length = 357 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 120/346 (34%), Positives = 185/346 (53%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72 + S + ++ DP L N+ E L + L ++ ++E + R+ D L Sbjct: 7 LEEIESTFSEIESRMVDPALSSNLQEMHALGKRHSELSPIVAALREYRGVLRRIQDAREL 66 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L E +E S ++++ + + L D+ D +E+ AGAGG E+ Sbjct: 67 LSQEDEGLRELAKEELSTLEEQVEPLEQRIKVLLLPQDPNDAKDVVIEIRAGAGGEEAAL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY R+AE+ + +E L +D G K +KG Y LK E GVHR+ R Sbjct: 127 FAADLFRMYNRFAEREGWGSELLSTNDTGIGGYKEVVFHLKGTGVYSKLKYESGVHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 I ++ R HTS +++ V P + +++++ D +IDTYRASGAGGQ+VN TDSAVRI Sbjct: 187 IPVTEAGGRIHTSTATVAVLP-EAEEVDVQVRTEDLKIDTYRASGAGGQYVNMTDSAVRI 245 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV CQ ERSQ KN+ +A +LR +LY+LELQK++ + + K ++G G Sbjct: 246 THVPTGLVVTCQDERSQLKNRVKAMQLLRTRLYDLELQKQQAV--MAAERKGQVGTGDRS 303 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R VLDGDL + ++A ++ Sbjct: 304 ERIRTYSY-PQNRLTDHRIGFTLYKLDQVLDGDLYELVEALTVAEQ 348 >gi|39998194|ref|NP_954145.1| peptide chain release factor 1 [Geobacter sulfurreducens PCA] gi|61214645|sp|Q748B1|RF1_GEOSL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|39985140|gb|AAR36495.1| peptide chain release factor 1 [Geobacter sulfurreducens PCA] gi|298507132|gb|ADI85855.1| peptide chain release factor 1 [Geobacter sulfurreducens KN400] Length = 355 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 116/343 (33%), Positives = 178/343 (51%), Gaps = 9/343 (2%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + R L + DP + N E + L RE L I + + L + Sbjct: 1 MFEKIEELEVRYHELESLLADPAVLGNQPEFRRLSREHNDLTPLIESYRTYKKVLEEMEG 60 Query: 72 LLELALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 EL + + + E + QR + + L D + LE+ AG GG ES Sbjct: 61 NRELLADPEMKEMAQAELEELEQRQEELEGEIKLLLLPRDPNDDRNVILEIRAGTGGDES 120 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY+R+AE+ ++K E + + E G K LI+G + LK E G HR+ Sbjct: 121 ALFAGDLFRMYSRFAERNRWKVEVMSASESERGGFKEIVALIEGQGVFAKLKYESGTHRV 180 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS ++ V P + IE++I+ +D +ID YRASGAGGQHVN T+SAV Sbjct: 181 QRVPETEAQGRIHTSACTVAVLP-EAEDIEVDINPADLKIDVYRASGAGGQHVNKTESAV 239 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG+VV+CQ ERSQ KN+A+A +L+ K+ + Q++ A I K ++G G Sbjct: 240 RITHIPTGIVVECQDERSQIKNRAKAMKVLKTKILDGLHQEQN--ARIAADRKQQVGSGD 297 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P + D R + +++GD+ + + A Sbjct: 298 RSERIRTYNF-PQGRMTDHRIGLTLYRLDSLMEGDIAEVVDAL 339 >gi|300814565|ref|ZP_07094819.1| peptide chain release factor 1 [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511333|gb|EFK38579.1| peptide chain release factor 1 [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 358 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 110/343 (32%), Positives = 173/343 (50%), Gaps = 11/343 (3%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 R + L D ++ N + E L +S +E + + L E+ Sbjct: 9 EDRYNELEKSLMDINVINNSSLYQKTAIEHAELQPIVSKYREYKKTKENLNDSKALLAEK 68 Query: 80 DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 D + D++ + +E + + D + +E+ AGAGG E+ +A Sbjct: 69 LDDDMKDLVKDDISTNEKNLEKIEEDLKILLIPKDPNDKKNVMVEIRAGAGGDEAALFAG 128 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L R Y R+AE+ +K + + ++ G K +I G AY LK E GVHR+ R+ Sbjct: 129 TLFRQYVRYAERCGWKVDIISTNEIGIGGYKEVVFMIIGRGAYSRLKYESGVHRVQRVPE 188 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS +++ V P + +E+EI ++ + D +RASG GGQ VNTTDSAVR+THI Sbjct: 189 TESGGRIHTSTATVAVLP-EVEDVEVEIDPTEIKFDVFRASGNGGQCVNTTDSAVRLTHI 247 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTG+V+ CQ E+SQ NK +A +LRAKLY+L++Q++ E +++G G +I Sbjct: 248 PTGIVISCQDEKSQLMNKEKAMKLLRAKLYDLKIQEQNE--KNSAQRLSQVGTGDRSERI 305 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R+Y P V D R N + DG+LD+ + A A + Sbjct: 306 RTYNY-PQGRVTDHRINYTTHQIDSINDGELDELIDALTAADQ 347 >gi|261340150|ref|ZP_05968008.1| peptide chain release factor 1 [Enterobacter cancerogenus ATCC 35316] gi|288317665|gb|EFC56603.1| peptide chain release factor 1 [Enterobacter cancerogenus ATCC 35316] Length = 360 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 113/337 (33%), Positives = 176/337 (52%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + + + D + Sbjct: 9 LEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSKCYTDWRQVQDDIETAQMM 68 Query: 76 ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E D R + + Q L D +A++EV AG GG E+ +A Sbjct: 69 LDDPEMREMAQEELQDAKARSEEMEQQLQVLLLPKDPDDERNAFVEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E L ++GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRVEILSANEGEHGGFKEVIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ + ++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIE 342 >gi|51596331|ref|YP_070522.1| peptide chain release factor 1 [Yersinia pseudotuberculosis IP 32953] gi|81639458|sp|Q66AX5|RF1_YERPS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|51589613|emb|CAH21243.1| peptide chain release factor RF-1 [Yersinia pseudotuberculosis IP 32953] Length = 360 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 116/337 (34%), Positives = 174/337 (51%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + KE + D + Sbjct: 9 LEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSAQDDIEAAEMM 68 Query: 76 ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E R + + Q L D D +LE+ AG GG E+ +A Sbjct: 69 LDDLEMREMAQEELKIAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 + RMY+R+AE R++K E + +GE G K I G +G LK E G HR+ R+ Sbjct: 129 GDMFRMYSRYAETRRWKVEIMSASEGEHGGYKEVIAKISGDGVFGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ EI+ D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVMPAIPEAELPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR+ + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQ--LAEASERRNLLGTGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ +V++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQ 342 >gi|323496829|ref|ZP_08101866.1| peptide chain release factor 1 [Vibrio sinaloensis DSM 21326] gi|323318088|gb|EGA71062.1| peptide chain release factor 1 [Vibrio sinaloensis DSM 21326] Length = 362 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 112/346 (32%), Positives = 180/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72 + V+R + DP + + + + L +E L+ + Q D + Sbjct: 9 LETLVERYEEVQHLLGDPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQEDLVAAEEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 EE +E + I+ + Q L D + +LE+ AGAGG E+ Sbjct: 69 ANEDDEEMREMAQEEIKEAKDAIERLSDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AEK+ ++ E + ++ E G K + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSKFAEKKGWRVEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RI Sbjct: 189 VPATESQGRVHTSACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG VV+CQ ERSQHKNKA+A +L A++ ++ ++ + A ++ + +G G Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARI--IQAEEAKRAAEESDTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ ++V++GD+ + + + Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTLYRLNEVMEGDVSSLIDPVIQEHQ 351 >gi|331652249|ref|ZP_08353268.1| peptide chain release factor 1 [Escherichia coli M718] gi|331050527|gb|EGI22585.1| peptide chain release factor 1 [Escherichia coli M718] Length = 360 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 113/344 (32%), Positives = 179/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ ++ + + Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+A+ R+++ E + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYADARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + D+ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R+Y P V D R N+ +V++G LD ++ + + Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 349 >gi|94971498|ref|YP_593546.1| peptide chain release factor 1 [Candidatus Koribacter versatilis Ellin345] gi|119361503|sp|Q1II28|RF1_ACIBL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|94553548|gb|ABF43472.1| bacterial peptide chain release factor 1 (bRF-1) [Candidatus Koribacter versatilis Ellin345] Length = 359 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 107/346 (30%), Positives = 171/346 (49%), Gaps = 12/346 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ D + L P + + + + + L + +E +D Sbjct: 1 MFERLDLMEAKYDELTQALASPEIVNDSAKYQKTAKAHAELTQLVQKYREYKDLTRGIKD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 ++ EE D + L ++ + + L D + +E+ AG GG Sbjct: 61 SRQMVAEETDAEMKAYAQQELTELEQRLHAVEEDLKVLLLPRDPNDDKNIIVEIRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY R+AE +++K E L + G+K +I+G AY LK E GV Sbjct: 121 DEASLFAAELFRMYNRYAETQRWKVEVLSSSESGVGGLKEVIAIIEGRGAYSKLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS ++ V P + ++I+I D RIDT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPQTETQGRVHTSAVTVAVLP-EAEEVDIKIEAKDIRIDTFCSSGPGGQSVNTTY 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PT VV CQ E+SQ KN+ + +LRA+LYE+E QK+ + + + K ++G Sbjct: 240 SAVRITHLPTNTVVSCQDEKSQIKNREKGMRVLRARLYEVEQQKQAD--ALAKERKQQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G +IR+Y P V D R S+ +DG ++ ++A Sbjct: 298 SGDRSEKIRTYNF-PQNRVTDHRIGYTVHQLSEFMDGKINALIEAL 342 >gi|288929843|ref|ZP_06423686.1| peptide chain release factor 2, programmed [Prevotella sp. oral taxon 317 str. F0108] gi|288328944|gb|EFC67532.1| peptide chain release factor 2, programmed [Prevotella sp. oral taxon 317 str. F0108] Length = 372 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 128/359 (35%), Positives = 205/359 (57%), Gaps = 12/359 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + L D D+ L +T+ P W + A+ M++ + ++ I KE+ Sbjct: 10 IQERAEALHRYLDIDHKRVELEEEELRTQAPDFWDDPARAQEQMKKVKGIEKWIVGYKEV 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + + + DD +E ++ ++ VE + ++L + D D L+++ Sbjct: 70 RQAADELQLAFDFY--HDDMVTEEEVDEDYRKAITAVENLELMNMLRQKEDPMDCVLKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWL 181 +GAGGTESQDWA ML+RMY RWAE + + +G+EAGIKS T+ I+ G AYG+L Sbjct: 128 SGAGGTESQDWAQMLMRMYMRWAESHGHRVTISNLQEGDEAGIKSVTMEIEGGEYAYGYL 187 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVR+SPY++ +R TSF+S++V P+VDD+IE+ + S D +R+ GAGGQ Sbjct: 188 KSENGVHRLVRVSPYNAQGKRMTSFASVFVSPLVDDTIEVYVDPSKVSWDLFRSGGAGGQ 247 Query: 242 HVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 +VN ++ VR+ + T ++++ + R Q +N+ A +L+++LY+ ++KR Sbjct: 248 NVNKVETGVRLRYQYTDPDTGEEEEILIENTESRKQLENRNNAMRLLKSQLYDRAMKKRL 307 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E E+ K +I WG QIRSYV + VKD RTN + V+DG +DDF+KA L Sbjct: 308 EAQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTADVDGVMDGKIDDFIKAYLM 365 >gi|261821677|ref|YP_003259783.1| peptide chain release factor 1 [Pectobacterium wasabiae WPP163] gi|261605690|gb|ACX88176.1| peptide chain release factor 1 [Pectobacterium wasabiae WPP163] Length = 360 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 115/337 (34%), Positives = 177/337 (52%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + +P + ++ + L RE L + ++ Q D + Sbjct: 9 LEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQQWQQAQEDQQTAEMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE I+ + Q L D +LEV AG GG E+ +A Sbjct: 69 LDDPEMRDMAQEELKEGKATIEALEQQLQVLLLPKDPDDERGCFLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESRRWRVEVVSASEGEHGGYKEVIAKISGDGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V V ++ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMAEVPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIRAAEIHKRQQE--EASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 IR+Y P V D R N+ +V++G LD ++ Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDTLIQ 342 >gi|297180269|gb|ADI16488.1| protein chain release factor a [uncultured bacterium HF4000_05M23] Length = 360 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 121/347 (34%), Positives = 182/347 (52%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R S + P + + L RE L + + +I D E+ Sbjct: 9 LKEIADRHSEVERLMSQPETASDPNAIRRLGREYSQLQHVVELWNDITRAQSDMEGAREM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EDD +L+ ++ ++ + E L E + DA +EV AGAGG E+ Sbjct: 69 LTAEDDAEVLEMAKVEVEELQERLDSLTAEIRLELLPKDETELADAVVEVRAGAGGDEAG 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A + RMY R+AE RK+K + L +D GIK T I G AY L E GVHR+ Sbjct: 129 LFAAEVFRMYQRYAEARKWKLKILSQNDTGVGGIKEVTFEIAGERAYQRLHLESGVHRVQ 188 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + ++IEIS+ D ++D Y +SGAGGQ VN +A+R Sbjct: 189 RVPATESQGRIHTSTATVVVMP-KAEEVDIEISDKDLKVDVYHSSGAGGQSVNKLATAIR 247 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VVQCQ ERSQ +N+ QA +LR++L+++EL+K++E I + K ++G G Sbjct: 248 ITHLPTGLVVQCQNERSQLQNRMQAMEILRSRLWDMELRKQQEE--ISANRKAQVGTGDR 305 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R VL G+LD F+ A L ++ Sbjct: 306 SEKIRTYNF-PQSRITDHRIGYTSHQMQQVLGGELDGFVDALLQEEQ 351 >gi|170723283|ref|YP_001750971.1| peptide chain release factor 2 [Pseudomonas putida W619] gi|169761286|gb|ACA74602.1| peptide chain release factor 2 [Pseudomonas putida W619] Length = 304 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 167/302 (55%), Positives = 221/302 (73%), Gaps = 1/302 (0%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 L + + ++ L D LL++A+EE+D S + + LQ ++ ++ +F + SGE Sbjct: 2 LAQVVETLDKMSGGLADCQDLLDMAVEENDESAVSDVVTELQGLEEKLAQLEFRRMFSGE 61 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F +E+ +GE AGIK AT+ Sbjct: 62 MDMNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVH 121 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 IKG A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EI+I+ SD RID Sbjct: 122 IKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIDINPSDLRID 181 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 TYR+SGAGGQHVNTTDSAVRITH+PT VV CQ ERSQH NK A MLRAKLYELE+QK Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQK 241 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R + E SK++IGWG QIRSYVL +KDLRT +E++ + VLDGD+D +++A+L Sbjct: 242 RNAASQALEDSKSDIGWGHQIRSYVLDD-SRIKDLRTGVERSDCNKVLDGDIDQYLEASL 300 Query: 352 AI 353 Sbjct: 301 KQ 302 >gi|297620931|ref|YP_003709068.1| Peptide chain release factor 1 [Waddlia chondrophila WSU 86-1044] gi|297376232|gb|ADI38062.1| Peptide chain release factor 1 [Waddlia chondrophila WSU 86-1044] Length = 354 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 113/344 (32%), Positives = 185/344 (53%), Gaps = 10/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + RL L P + + ++L +E HL +++ + E+ Sbjct: 5 VEEMLNRLPELEELLGQPDVVNDQKRYRLLTQEHAHLSQLKQVYEDLISSRKELSDNEEM 64 Query: 76 ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E+D ++ ++++R+ + + + + D+ + LE+ AG GG E+ Sbjct: 65 FASEEDAEFIKVLEEDIERLTKKTGELQKKLETLIVPPDPKDNKNTILELRAGTGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + +RMY +A++R +K E L + G K + + GPN Y +LK E G HR+ Sbjct: 125 LFVGDCVRMYKMFADERGWKYEELASSPSDAGGFKEYMMALSGPNVYRYLKYEGGTHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS ++ V D+ E++I E D R+DTYRASGAGGQHVNTTDSAVR Sbjct: 185 RVPETETQGRVHTSAITVAVLLEPDEDSEVQIDEKDLRVDTYRASGAGGQHVNTTDSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTG+V C +ERSQHKN+ +A +L+AK+ E+E QK+ E +++G G Sbjct: 245 LTHIPTGIVAYCSEERSQHKNRDKAMRLLKAKIMEIEAQKKFEER--ASERASQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P + D R N+ K + V++GDL++ + A +A Sbjct: 303 SERIRTYNF-PQNRITDHRINLTKYNLDKVMEGDLEEIVNAIVA 345 >gi|114319440|ref|YP_741123.1| peptide chain release factor 1 [Alkalilimnicola ehrlichii MLHE-1] gi|119361505|sp|Q0AC04|RF1_ALHEH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|114225834|gb|ABI55633.1| bacterial peptide chain release factor 1 (bRF-1) [Alkalilimnicola ehrlichii MLHE-1] Length = 361 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 118/346 (34%), Positives = 175/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLIL 72 + +R ++ +P + L RE L+ I + +E + L + Sbjct: 9 LERLRERHEEISALLAEPDTASDQKRFAALSREYAQLEPVIAELNHYQETEQALASAREM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E +E S R++ Q L D + YLE+ AG GG E+ Sbjct: 69 ARDDDLEIREMAEEEISQAQARLEALEAELQVLLLPPDPNDGRNLYLEIRAGTGGDEAAL 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A LLRMY R+AE+ ++ E + +GE+ G K I G A+ LK E G HR+ R Sbjct: 129 FAGDLLRMYARYAERHGWRLEEISASEGEQGGYKEVITRISGEGAWSRLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D +I I+ ++ R+DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDAVEDITINPAELRVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTGVVV+CQ ERSQHKN+AQA +L+A+L + E+ A E + +G G Sbjct: 249 THLPTGVVVECQSERSQHKNRAQALALLQARLKNAQQ--AEQSAQQTEQRRQLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ ++L GDLD ++ + Sbjct: 307 ERIRTYNF-PQGRITDHRINLTLYRLEEILQGDLDQLVEPLRTEHQ 351 >gi|227513055|ref|ZP_03943104.1| peptide chain release factor 1 [Lactobacillus buchneri ATCC 11577] gi|227083630|gb|EEI18942.1| peptide chain release factor 1 [Lactobacillus buchneri ATCC 11577] Length = 361 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 108/352 (30%), Positives = 181/352 (51%), Gaps = 13/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68 +FD V R LN DP + + L +E L + ++ + + +L D Sbjct: 4 IFDKLQAVVDRYDELNELISDPEVIADTQRFMKLSKEEGELRDTVAAYNKYKEVSKQLDD 63 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAG 126 + +L +++ D + + + + + Q + + D + +E+H AG Sbjct: 64 DEEMLREKIDDADLESMVKDEISDFKDQKAKLEDQLKVMLLPKDPNDEKNIIMEIHGAAG 123 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E +A L MY+++AE++ +K E ++ + E G K L+I G Y LK E G Sbjct: 124 GDEGSLFAADLFSMYSKYAERQGWKVEVIDKSETEVGGFKEIVLMITGDKVYSKLKYENG 183 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P ++ ++I+I D R+D YR+SGAGGQH+N T Sbjct: 184 AHRVQRVPVTESAGRVHTSTATVGVMP-EEEDVDIDIDPKDIRVDVYRSSGAGGQHINKT 242 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+TH+PTG+VV Q ERSQ +N+A+A +L+A++Y+ Q+ E K+ I Sbjct: 243 SSAVRMTHLPTGIVVAMQDERSQQQNRAKAMKILKARVYDYYAQQ--EQDQYNAERKSAI 300 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R + +++G+LDD + A + + Sbjct: 301 GTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMNGELDDIVDALILSDQ 351 >gi|238751561|ref|ZP_04613052.1| Peptide chain release factor 1 [Yersinia rohdei ATCC 43380] gi|238710279|gb|EEQ02506.1| Peptide chain release factor 1 [Yersinia rohdei ATCC 43380] Length = 360 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 116/337 (34%), Positives = 174/337 (51%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + KE + D + Sbjct: 9 LEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSVQDDLEAAEMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE R + + Q L D D +LE+ AG GG E+ +A Sbjct: 69 LEDLEMREMAQEELKEAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 + RMY+R+AE R++K E + +GE G K + G +G LK E G HR+ R+ Sbjct: 129 GDMFRMYSRYAESRRWKVEIMSASEGEHGGYKEVIAKVSGEGVFGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ EI+ D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR+ + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQ--LAEASERRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ +V++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQ 342 >gi|206603661|gb|EDZ40141.1| Peptide chain release factor 1 [Leptospirillum sp. Group II '5-way CG'] Length = 361 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 118/344 (34%), Positives = 186/344 (54%), Gaps = 8/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R ++ K DP + +N L R++ L +S + + L EL Sbjct: 14 LESMRERYREISGKMADPEVSRNPAIYMKLARDQSELSIIVSLYENYLRIIDQQKDLQEL 73 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134 + D ++ + L +VE + +S+ E DS + +LE+ AGAGG E+ +A Sbjct: 74 RQDPDFLDLVPQEEKKLSLELQDVESRLLDSILPRDERDSRNLFLEIRAGAGGEEAALFA 133 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+ E++ F+ E +E +D E G + + ++G A+ LK E GVHR+ R+ Sbjct: 134 RELARMYLRFIERKGFRFEVMETNDTEIGGARETIIYVQGHGAFSQLKFESGVHRVQRVP 193 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ + P ++++I D RIDT+ AS AGGQ VNTT SAVRITH Sbjct: 194 VTEAGGRIHTSTVTVAMIP-EASEVDVQIDPKDLRIDTFCASSAGGQSVNTTYSAVRITH 252 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PT +VV CQ ERSQ KNKA+A +LRA+L E E ++ E I K+++G G + Sbjct: 253 LPTNIVVSCQDERSQLKNKAKAMKVLRARLMEKEQTRQNE--QIASDRKSQVGTGDRSER 310 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R + V++G++D F+ A A ++ Sbjct: 311 IRTYNF-PQNRVTDHRIGMTLYQLDQVMEGNIDPFVDALRAQER 353 >gi|297202390|ref|ZP_06919787.1| peptide chain release factor 1 [Streptomyces sviceus ATCC 29083] gi|197710089|gb|EDY54123.1| peptide chain release factor 1 [Streptomyces sviceus ATCC 29083] Length = 358 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 117/350 (33%), Positives = 174/350 (49%), Gaps = 16/350 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + V + L K DP + + A+ L + L ++ + + D Sbjct: 1 MFEAVEELVGEHADLEKKLADPSVHSDQANARKLNKRYAELTPIVATYRSWKQTGDDIET 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EL DD E + + E + + +D D LE+ AGAGG ES Sbjct: 61 AREL--GADDAEFAAEVKELEKARDELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG----------PNAYGWL 181 +A LLRMY R+AE+ +KTE ++ + E G K + +K + + Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVAVKTKGGNGATEPGQGVWARM 178 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHR+ R+ +S R HTS + + V P + +++EI+ +D RID YR+SG GGQ Sbjct: 179 KYEGGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEVDVEINPNDLRIDVYRSSGPGGQ 237 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITHIPTGVV CQ E+SQ +NK QA +LR++L ++ E A Sbjct: 238 SVNTTDSAVRITHIPTGVVASCQNEKSQLQNKEQALRILRSRLLAAAQEEAERNAADARR 297 Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 S+ + +IR+Y P + D R + + VLDGDLD ++A Sbjct: 298 SQVRTVDRSEKIRTYNF-PENRISDHRVGFKSYNLDQVLDGDLDAVIQAC 346 >gi|313107327|ref|ZP_07793522.1| peptide chain release factor 1 [Pseudomonas aeruginosa 39016] gi|310880024|gb|EFQ38618.1| peptide chain release factor 1 [Pseudomonas aeruginosa 39016] Length = 360 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 116/342 (33%), Positives = 174/342 (50%), Gaps = 9/342 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + RE ++ I ++ + D L Sbjct: 9 LDVLSDRYEELTALLGDAEVISDQTRFRAYSREYAEVEPVILAFRDYRKVQADLEGAQAL 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + R+ + Q L DS + +LE+ AG GG E+ Sbjct: 69 LKDSDPELRDLAEEEVAEARGRLAALGDSLQRMLLPKDPNDSRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AE++ ++ E L ++GE G K ++G N Y LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAERQGWRVETLSENEGEHGGYKEVIARVEGDNVYAKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI+ +D R+DTYR+SGAGGQHVN TDSAVRI Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQATIEINPADLRVDTYRSSGAGGQHVNKTDSAVRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIP+G+VV+CQ+ERSQHKN+A+A L AKL + + I + K +G G Sbjct: 249 THIPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQ--AAAQQAIASTRKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R N+ S +V++G ++ ++ L Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYSLGEVMEGAVEQVIEPLL 347 >gi|163868347|ref|YP_001609556.1| peptide chain release factor 2 [Bartonella tribocorum CIP 105476] gi|161018003|emb|CAK01561.1| peptide chain release factor RF-2 [Bartonella tribocorum CIP 105476] Length = 321 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 210/309 (67%), Positives = 256/309 (82%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRERQ LD++I+ + L + + L+ + EE D I+ + ++++ +K E++ +Q + Sbjct: 1 MRERQRLDDSINGLLSFTKTLEECIELIAMGEEESDVEIIADAENSIRHLKSEIDKRQID 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LLSGEADSND YLEVHAGAGGTESQDWA+MLLRMY RWAE+ + K E LEIHDGEEAGI Sbjct: 61 VLLSGEADSNDTYLEVHAGAGGTESQDWASMLLRMYMRWAEQHEMKVEVLEIHDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+L+KG NAYG LK E GVHRLVRISP+DSN++RHTSF+SIWVYPV+DD+IE+++SE Sbjct: 121 KSATILVKGHNAYGLLKTESGVHRLVRISPFDSNAKRHTSFASIWVYPVIDDNIEVDVSE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+LY Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+KREE N ESSKTEIGWG QIRSYVLQPYQ+VKDLRT IE T P VL+G+LD Sbjct: 241 EEELKKREEETNAVESSKTEIGWGHQIRSYVLQPYQLVKDLRTGIENTDPQSVLNGNLDA 300 Query: 346 FMKATLAIK 354 F++A L+ + Sbjct: 301 FIEAALSQR 309 >gi|256380143|ref|YP_003103803.1| peptide chain release factor 1 [Actinosynnema mirum DSM 43827] gi|255924446|gb|ACU39957.1| peptide chain release factor 1 [Actinosynnema mirum DSM 43827] Length = 354 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 120/346 (34%), Positives = 179/346 (51%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + L TK DP + + A+ L + L + +E++ D EL Sbjct: 5 LDALIAEHGELETKLADPSVHADQAGARKLGKRYAELTPIVRAARELEQTRNDLGAAREL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D + +E + RI E L DS+D +E+ +G GG ES +A Sbjct: 65 --AGEDPAFAEEADELSARIPQLEERLTELLLPRDPHDSSDVVMEIKSGEGGEESALFAG 122 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190 LLRMY R+AE++ +K E L+ D + G K T+ IK + LK E GVHR+ Sbjct: 123 DLLRMYLRYAERQGWKAEVLDGTDSDLGGFKDVTVAIKSRGDGPDGVWSRLKYEGGVHRV 182 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS + + V P +D IEI + D R+D +R+SG GGQ VNTTDSAV Sbjct: 183 QRVPVTESQGRIHTSAAGVLVIPETEDVASIEIDDKDLRVDVFRSSGKGGQSVNTTDSAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG+VV CQ ERSQ +NKA+A +L+A+L L +K ++ A+ ++ + Sbjct: 243 RITHLPTGIVVSCQNERSQLQNKARAMQVLQARLQALAEEKAQQEASDARRTQVRTVDRS 302 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 ++R+Y P + D R + + VLDG+LD + A A + Sbjct: 303 ERVRTYNF-PESRISDHRVGYKAHNLDAVLDGELDAVLDALSAADR 347 >gi|116052810|ref|YP_793127.1| peptide chain release factor 1 [Pseudomonas aeruginosa UCBPP-PA14] gi|218893762|ref|YP_002442631.1| peptide chain release factor 1 [Pseudomonas aeruginosa LESB58] gi|254244443|ref|ZP_04937765.1| peptide chain release factor 1 [Pseudomonas aeruginosa 2192] gi|296391486|ref|ZP_06880961.1| peptide chain release factor 1 [Pseudomonas aeruginosa PAb1] gi|122257179|sp|Q02G09|RF1_PSEAB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|226739119|sp|B7V0L1|RF1_PSEA8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|115588031|gb|ABJ14046.1| peptide chain release factor 1 [Pseudomonas aeruginosa UCBPP-PA14] gi|126197821|gb|EAZ61884.1| peptide chain release factor 1 [Pseudomonas aeruginosa 2192] gi|218773990|emb|CAW29805.1| peptide chain release factor 1 [Pseudomonas aeruginosa LESB58] Length = 360 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 116/342 (33%), Positives = 174/342 (50%), Gaps = 9/342 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + RE ++ I ++ + D L Sbjct: 9 LDVLSDRYEELTALLGDAEVISDQTRFRAYSREYAEVEPVILAFRDYRKVQADLEGAQAL 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + R+ + Q L DS + +LE+ AG GG E+ Sbjct: 69 LKDSDPELRDLAEEEVAEARGRLAALGDSLQRMLLPKDPNDSRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AE++ ++ E L ++GE G K ++G N Y LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAERQGWRVETLSENEGEHGGYKEVIARVEGDNVYAKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI+ +D R+DTYR+SGAGGQHVN TDSAVRI Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQHVNKTDSAVRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIP+G+VV+CQ+ERSQHKN+A+A L AKL + + I + K +G G Sbjct: 249 THIPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQ--AAAQQAIASTRKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R N+ S +V++G ++ ++ L Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYSLGEVMEGAVEQVIEPLL 347 >gi|193211744|ref|YP_001997697.1| peptide chain release factor 1 [Chlorobaculum parvum NCIB 8327] gi|238692678|sp|B3QRH7|RF1_CHLP8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|193085221|gb|ACF10497.1| peptide chain release factor 1 [Chlorobaculum parvum NCIB 8327] Length = 357 Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats. Identities = 100/352 (28%), Positives = 182/352 (51%), Gaps = 13/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + + + + DP + + + L +E L + + Sbjct: 1 MFDKLQSIKDKYLTIEQQLSDPEVAADQNRFRKLNKEYSGLREIVRAYDNWRSAKQQLDE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 L + E+D + + + ++ + + L EAD+ +A +E+ AG GG Sbjct: 61 TLAMQKSEEDPEMRALAAAEAEELQERLPELEQNLKILLLPKDEADTRNAIIEIRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGPNAYGWLKGEQG 186 E+ +A L+RMY R+AE++ + + L++ +G G K +L + G + YG LK E G Sbjct: 121 DEAGLFAADLMRMYQRYAERQGWSCQTLDVSEGSVPGSLKEVSLEVSGHDVYGILKFESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ ++ R HTS +S+ V P + +++EI + D ++DT+R+ G GGQ+VN Sbjct: 181 VHRVQRVPETETQGRIHTSAASVAVLP-EAEEVDVEIRKDDLQMDTFRSGGKGGQNVNKV 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 ++AVRITH+P+G+VV CQ+ERSQ +N+ +A MLR+KLY++++ ++ + ++ + Sbjct: 240 ETAVRITHVPSGIVVACQEERSQLQNRERAMKMLRSKLYDIKITEQLQSRADL--RRSMV 297 Query: 307 GWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G + IR+Y P V D R + V+ G+L+ + A + Sbjct: 298 ATGDRSAKIRTYNF-PQSRVTDHRIGFTTHALPQVMQGELEPIIDALRMHDQ 348 >gi|218689158|ref|YP_002397370.1| peptide chain release factor 1 [Escherichia coli ED1a] gi|254790882|sp|B7MTZ5|RF1_ECO81 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|218426722|emb|CAR07559.1| peptide chain release factor RF-1 [Escherichia coli ED1a] Length = 360 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 114/344 (33%), Positives = 179/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ ++ + + Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + D+ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R+Y P V D R N+ +V++G LD ++ + + Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYCLDEVMEGKLDMLIEPIIQEHQ 349 >gi|326571210|gb|EGE21234.1| peptide chain release factor 1 [Moraxella catarrhalis BC7] Length = 359 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 116/341 (34%), Positives = 171/341 (50%), Gaps = 7/341 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V R + DP + + + L E L + ++ D EL Sbjct: 9 LDQMVDRFEEVTVLLSDPDTISDNKKFRELSMEHSDLSEITTTWQDFVQAEADLQTANEL 68 Query: 76 ALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + E I+ E L D A+LE+ AG GG E+ ++ Sbjct: 69 LSDPEMKEMALDEIEVARANIETLEERLNVMMLPKDPNDKATAFLEIRAGTGGDEAAIFS 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY ++ + + ++ E L ++GE G K + G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYQKYTQSQGWQVEVLSANEGEHGGYKEIIARVSGIGVYGRLKFESGAHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P V+ +EI+ SD RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 189 ATESQGRVHTSACTVAVMPEVEIDDTVEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTGVV +CQQERSQH NK +A ML A++ + ++Q +I + + +G G + Sbjct: 249 IPTGVVAECQQERSQHANKEKAMKMLVARIQQAKVQ--AQIDATSDMRRNLVGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IR+Y P + D R N+ +++GDL + + + L Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSLLR 346 >gi|330815385|ref|YP_004359090.1| Peptide chain release factor 1 [Burkholderia gladioli BSR3] gi|327367778|gb|AEA59134.1| Peptide chain release factor 1 [Burkholderia gladioli BSR3] Length = 360 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 115/344 (33%), Positives = 178/344 (51%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D RL+ LN ++ ++ + + L RE + + + + D EL Sbjct: 9 LDQLSNRLAELNELLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRLARGDEATAQEL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + +E + Q L D + +LE+ AG GG ES +A Sbjct: 69 LSDAAMREFAEEEIREARERMARLEAELQKMLLPRDPNDERNIFLEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE+++++ E + + G K + I G AY LK E G HR+ R+ Sbjct: 129 GDLLRMYLRYAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIAEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ +RSQHKNK +A +L A++ + Q E+ A + K+ IG G + Sbjct: 249 LPTGIVVECQDDRSQHKNKERALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++DGDLD+ + ++ + Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYKLEALMDGDLDEMIATLVSEHQ 349 >gi|299537972|ref|ZP_07051258.1| peptide chain release factor 1 [Lysinibacillus fusiformis ZC1] gi|298726554|gb|EFI67143.1| peptide chain release factor 1 [Lysinibacillus fusiformis ZC1] Length = 358 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 104/351 (29%), Positives = 174/351 (49%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD R L DP + + + + +E+ + + +E + + Sbjct: 1 MFDRLQAVEDRYERLTELLSDPDIVNDSKKLREYSKEQSDIQETVDTYREYKSVKEQLVD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 E+ E D + + + +K + E + + D+ + +E+ AGG Sbjct: 61 TREMLDSEKDPDMHEMVKEEFNLLKAQQEELEERLRILLIPKDPNDNKNVIMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE + +K + +E G K +I G AY K E G Sbjct: 121 DEANIFAGDLFRMYSRYAETQGWKIDIMEATPNPMGGYKEVIFMINGQGAYSKFKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ P + +++EI E D R+DT+ +SGAGGQ VNTT Sbjct: 181 HRVQRVPATESQGRIHTSTATVACLP-EVEEVDVEIHEKDIRVDTFASSGAGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTGVVV Q ERSQ KN+ +A +LRA++ ++ +Q E I + K+ +G Sbjct: 240 SAVRMTHLPTGVVVSMQDERSQIKNREKAMKILRARVADMYMQ--EAQKEIDATRKSAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++G LD+ + A + ++ Sbjct: 298 SGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIVEGRLDEIIDALILEEQ 347 >gi|15599860|ref|NP_253354.1| peptide chain release factor 1 [Pseudomonas aeruginosa PAO1] gi|107099668|ref|ZP_01363586.1| hypothetical protein PaerPA_01000686 [Pseudomonas aeruginosa PACS2] gi|12231016|sp|P42806|RF1_PSEAE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|9950920|gb|AAG08052.1|AE004880_8 peptide chain release factor 1 [Pseudomonas aeruginosa PAO1] Length = 360 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 116/342 (33%), Positives = 174/342 (50%), Gaps = 9/342 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + RE ++ I ++ + D L Sbjct: 9 LDVLSDRYEELTALLGDAEVISDQTRFRAYSREYAEVEPVILAFRDYRKVQADLEGAQAL 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + R+ + Q L DS + +LE+ AG GG E+ Sbjct: 69 LKDSDPELRDLAEEEVAEARGRLAALGDSLQRMLLPKDPNDSRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AE++ ++ E L ++GE G K ++G N Y LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAERQGWRIETLSENEGEHGGYKEVIARVEGDNVYAKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI+ +D R+DTYR+SGAGGQHVN TDSAVRI Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQHVNKTDSAVRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIP+G+VV+CQ+ERSQHKN+A+A L AKL + + I + K +G G Sbjct: 249 THIPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQ--AAAQQAIASTRKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R N+ S +V++G ++ ++ L Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYSLGEVMEGAVEQVIEPLL 347 >gi|37525987|ref|NP_929331.1| peptide chain release factor 1 [Photorhabdus luminescens subsp. laumondii TTO1] gi|46576710|sp|Q7N586|RF1_PHOLL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|36785417|emb|CAE14363.1| Peptide chain release factor 1 (RF-1) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 360 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 121/337 (35%), Positives = 177/337 (52%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + + K D + Sbjct: 9 LEALQERHEEVLAHLGDADVIADQERFRALSREYAQLTDVTNCFKAWSAVQDDLKAAEIM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE + R + + Q L D + +LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQEEIRDAKVRNEELEQQLQLLLLPKDPDDERNCFLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R++K E + +DGE G K + G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESRRWKVEVISANDGEHGGYKEIIAKVSGEQVYGHLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + D+ EIS SD RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVLPEIPDAELPEISPSDLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV+CQ ERSQHKNKA+A ++L A++ E++KR+E + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLAARIRAAEVRKRQE--AEASERRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ +V++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVIEGKLDMLVQ 342 >gi|329889563|ref|ZP_08267906.1| peptide chain release factor 2 [Brevundimonas diminuta ATCC 11568] gi|328844864|gb|EGF94428.1| peptide chain release factor 2 [Brevundimonas diminuta ATCC 11568] Length = 300 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 182/293 (62%), Positives = 222/293 (75%) Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D ++L ++A EE D + L++ + L+ IK + E+LLSGEAD NDAYLE+ Sbjct: 1 MEQGLEDGIMLADMADEEGDEATLEDAREQLKAIKERAARAELEALLSGEADGNDAYLEI 60 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 ++GAGGTES DWA ML+RMY+RWA ++ GE+AGIKSATL I GPNAYGWL Sbjct: 61 NSGAGGTESNDWAGMLMRMYSRWARAHGYEVTIEAEEQGEQAGIKSATLQIAGPNAYGWL 120 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVRISPYD+ ++RHTSF+SI V PVVDD+IEI+I+ +D R DTYRASGAGGQ Sbjct: 121 KSESGVHRLVRISPYDAAAKRHTSFASIGVSPVVDDTIEIDINPADVRTDTYRASGAGGQ 180 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+N TDSAVR+TH+PT VV CQ RSQH+N+ QAW MLRA+LYELELQKRE A Sbjct: 181 HINKTDSAVRLTHVPTNTVVACQAGRSQHQNREQAWKMLRARLYELELQKREAAAQALAD 240 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +KT+IGWG QIRSYVLQPYQMVKDLRT +E + VLDGDLD FM A LA + Sbjct: 241 AKTDIGWGHQIRSYVLQPYQMVKDLRTEVETSDTQGVLDGDLDPFMGAALAAR 293 >gi|22126175|ref|NP_669598.1| peptide chain release factor 1 [Yersinia pestis KIM 10] gi|45441669|ref|NP_993208.1| peptide chain release factor 1 [Yersinia pestis biovar Microtus str. 91001] gi|108807397|ref|YP_651313.1| peptide chain release factor 1 [Yersinia pestis Antiqua] gi|108811662|ref|YP_647429.1| peptide chain release factor 1 [Yersinia pestis Nepal516] gi|145598396|ref|YP_001162472.1| peptide chain release factor 1 [Yersinia pestis Pestoides F] gi|149366051|ref|ZP_01888086.1| peptide chain release factor 1 [Yersinia pestis CA88-4125] gi|153947351|ref|YP_001401039.1| peptide chain release factor 1 [Yersinia pseudotuberculosis IP 31758] gi|162421626|ref|YP_001606878.1| peptide chain release factor 1 [Yersinia pestis Angola] gi|165926418|ref|ZP_02222250.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis str. F1991016] gi|165938830|ref|ZP_02227384.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis str. IP275] gi|166009117|ref|ZP_02230015.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str. E1979001] gi|166210440|ref|ZP_02236475.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str. B42003004] gi|167401373|ref|ZP_02306870.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420420|ref|ZP_02312173.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424382|ref|ZP_02316135.1| peptide chain release factor 1 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170024410|ref|YP_001720915.1| peptide chain release factor 1 [Yersinia pseudotuberculosis YPIII] gi|186895374|ref|YP_001872486.1| peptide chain release factor 1 [Yersinia pseudotuberculosis PB1/+] gi|218929128|ref|YP_002347003.1| peptide chain release factor 1 [Yersinia pestis CO92] gi|229894728|ref|ZP_04509908.1| peptide chain release factor RF-1 [Yersinia pestis Pestoides A] gi|229897428|ref|ZP_04512584.1| peptide chain release factor RF-1 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229898071|ref|ZP_04513222.1| peptide chain release factor RF-1 [Yersinia pestis biovar Orientalis str. India 195] gi|229901940|ref|ZP_04517061.1| peptide chain release factor RF-1 [Yersinia pestis Nepal516] gi|270490877|ref|ZP_06207951.1| peptide chain release factor 1 [Yersinia pestis KIM D27] gi|294503912|ref|YP_003567974.1| peptide chain release factor 1 [Yersinia pestis Z176003] gi|20139332|sp|Q8ZEX8|RF1_YERPE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361639|sp|Q1C854|RF1_YERPA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361640|sp|Q1CJK1|RF1_YERPN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223619|sp|A4TJN7|RF1_YERPP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166977371|sp|A7FIG1|RF1_YERP3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238687250|sp|A9QZ08|RF1_YERPG RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238688460|sp|B1JM85|RF1_YERPY RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238691366|sp|B2K2Z0|RF1_YERPB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|21959139|gb|AAM85849.1|AE013831_12 peptide chain release factor RF-1 [Yersinia pestis KIM 10] gi|45436531|gb|AAS62085.1| peptide chain release factor 1 [Yersinia pestis biovar Microtus str. 91001] gi|108775310|gb|ABG17829.1| bacterial peptide chain release factor 1 (bRF-1) [Yersinia pestis Nepal516] gi|108779310|gb|ABG13368.1| bacterial peptide chain release factor 1 (bRF-1) [Yersinia pestis Antiqua] gi|115347739|emb|CAL20654.1| peptide chain release factor 1 [Yersinia pestis CO92] gi|145210092|gb|ABP39499.1| bacterial peptide chain release factor 1 (bRF-1) [Yersinia pestis Pestoides F] gi|149292464|gb|EDM42538.1| peptide chain release factor 1 [Yersinia pestis CA88-4125] gi|152958846|gb|ABS46307.1| peptide chain release factor 1 [Yersinia pseudotuberculosis IP 31758] gi|162354441|gb|ABX88389.1| peptide chain release factor 1 [Yersinia pestis Angola] gi|165913193|gb|EDR31816.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis str. IP275] gi|165921639|gb|EDR38836.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis str. F1991016] gi|165991672|gb|EDR43973.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str. E1979001] gi|166207620|gb|EDR52100.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str. B42003004] gi|166962115|gb|EDR58136.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049069|gb|EDR60477.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056264|gb|EDR66033.1| peptide chain release factor 1 [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750944|gb|ACA68462.1| peptide chain release factor 1 [Yersinia pseudotuberculosis YPIII] gi|186698400|gb|ACC89029.1| peptide chain release factor 1 [Yersinia pseudotuberculosis PB1/+] gi|229680836|gb|EEO76931.1| peptide chain release factor RF-1 [Yersinia pestis Nepal516] gi|229689112|gb|EEO81177.1| peptide chain release factor RF-1 [Yersinia pestis biovar Orientalis str. India 195] gi|229693765|gb|EEO83814.1| peptide chain release factor RF-1 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229702201|gb|EEO90220.1| peptide chain release factor RF-1 [Yersinia pestis Pestoides A] gi|262361967|gb|ACY58688.1| peptide chain release factor 1 [Yersinia pestis D106004] gi|262365894|gb|ACY62451.1| peptide chain release factor 1 [Yersinia pestis D182038] gi|270339381|gb|EFA50158.1| peptide chain release factor 1 [Yersinia pestis KIM D27] gi|294354371|gb|ADE64712.1| peptide chain release factor 1 [Yersinia pestis Z176003] gi|320015305|gb|ADV98876.1| peptide chain release factor RF-1 [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 360 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 116/337 (34%), Positives = 174/337 (51%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + KE + D + Sbjct: 9 LEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSAQDDIEAAEMM 68 Query: 76 ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E R + + Q L D D +LE+ AG GG E+ +A Sbjct: 69 LDDLEMREMAQEELKIAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 + RMY+R+AE R++K E + +GE G K I G +G LK E G HR+ R+ Sbjct: 129 GDMFRMYSRYAETRRWKVEIMSASEGEHGGYKEIIAKISGDGVFGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ EI+ D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVMPAIPEAELPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR+ + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQ--LAEASERRNLLGTGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ +V++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQ 342 >gi|302024124|ref|ZP_07249335.1| peptide chain release factor 2 [Streptococcus suis 05HAS68] Length = 253 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 133/247 (53%), Positives = 171/247 (69%) Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167 LS D N+A LE+H G+GGTE+QDW MLLRMY R+ + F E L+ G+EAGIKS Sbjct: 5 LSDPYDHNNAILEIHPGSGGTEAQDWGEMLLRMYQRYGNAKGFIVETLDYQAGDEAGIKS 64 Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 TL GPNAYG LK E GVHRLVRISP+DS RRHTSF+S+ V P +DD+IEIEI + + Sbjct: 65 VTLSFTGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVMPELDDTIEIEIRDDE 124 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 ++DT+R+ GAGGQ+VN + VR+THIPTG+V Q +R+Q+ N+ +A +L+AKLY+L Sbjct: 125 VKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRTQYGNRDRAMKLLQAKLYQL 184 Query: 288 ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 E +K+ + + K EI WG QIRSYV PY MVKD RT E V+DGDLD F+ Sbjct: 185 EQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYTMVKDHRTGYEVAQVDKVMDGDLDGFI 244 Query: 348 KATLAIK 354 A L + Sbjct: 245 DAYLKWR 251 >gi|198284467|ref|YP_002220788.1| peptide chain release factor 1 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665453|ref|YP_002427134.1| peptide chain release factor 1 [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248988|gb|ACH84581.1| peptide chain release factor 1 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517666|gb|ACK78252.1| peptide chain release factor 1 [Acidithiobacillus ferrooxidans ATCC 23270] Length = 365 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 125/362 (34%), Positives = 186/362 (51%), Gaps = 15/362 (4%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 M LS +L + R L+ P + + L +E + + ++ Sbjct: 1 MSLSPRLQS-----QLEQLAFRFDELSQLLASPGAAGDTQRFQSLSKELGEIGPVLELLR 55 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSND 116 Q R D + LEE D + S+ + + E++ + L D Sbjct: 56 RHQQRQRDRDEGGRMLLEEQDAELRALASEEVAAAEAELDQIEAALRIRLLPKDPNDDRS 115 Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 +LE+ AG GG E+ +A +L RMYTR+AE + F L D E G K L I G Sbjct: 116 VFLEIRAGTGGEEAALFAGVLARMYTRYAESKGFGVVILSASDSERGGYKEVVLEISGRG 175 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 AY LK E G HR+ R+ ++ R HTS ++ V P VD EI I+ +D RIDTYRAS Sbjct: 176 AYSCLKFESGGHRVQRVPETETQGRIHTSACTVAVLPEVDTVSEITINPADLRIDTYRAS 235 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 GAGGQH+N TDSA+RITH+P+G+VV CQ++RSQHKN+A+A +L+A+L E E +K++ A Sbjct: 236 GAGGQHINKTDSAIRITHVPSGMVVTCQEDRSQHKNRARAMALLQARLLEQEQEKQQSAA 295 Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 ++ + +G G +IR+Y P + D R N+ VL+GDLD ++ + Sbjct: 296 --AQTRRLLVGSGDRSERIRTYNF-PQGRITDHRINLTLYRLEAVLEGDLDAVIEPLIKE 352 Query: 354 KK 355 + Sbjct: 353 YQ 354 >gi|255348385|ref|ZP_05380392.1| peptide chain release factor 1 [Chlamydia trachomatis 70] gi|255502926|ref|ZP_05381316.1| peptide chain release factor 1 [Chlamydia trachomatis 70s] gi|255506595|ref|ZP_05382234.1| peptide chain release factor 1 [Chlamydia trachomatis D(s)2923] gi|289525068|emb|CBJ14538.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis Sweden2] gi|296434608|gb|ADH16786.1| peptide chain release factor 1 [Chlamydia trachomatis E/150] gi|296438326|gb|ADH20479.1| peptide chain release factor 1 [Chlamydia trachomatis E/11023] Length = 359 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 111/338 (32%), Positives = 178/338 (52%), Gaps = 11/338 (3%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLELAL 77 +RL + + DP+++ N E L +E L + + + + L D+ + L Sbjct: 10 KRLEEVEKQISDPNIFSNPKEYSSLSKEHARLSEIKNAHESLVATKKILQDDKLALSTEK 69 Query: 78 EEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 + + ++L+E + + + + + D +E+ AG GG E+ + Sbjct: 70 DPEIVAMLEEGVLVGEEAVEHLSKQLENLLIPPDPDDDLSVIMELRAGTGGDEAALFVGD 129 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 +RMY +A + ++ E L + + G K + I G + +L+ E G HR+ R+ Sbjct: 130 CVRMYHLYAASKGWQCEVLSASESDLGGYKEYVMGISGASVKRFLQYEAGTHRVQRVPET 189 Query: 197 DSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 ++ R HTS ++ V P +D E+ I E D RIDT+R+SGAGGQHVN TDSAVRITHI Sbjct: 190 ETQGRVHTSAVTVAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSAVRITHI 249 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 P+GVVV CQ ERSQHKNKA+A +L+A++ + E+QKR + A+ S ++G G +I Sbjct: 250 PSGVVVTCQDERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRS--AQVGSGDRSERI 307 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 R+Y P V D R + + V++G+LD A Sbjct: 308 RTYNF-PQNRVTDHRIGLTLYNLDRVMEGELDMITTAL 344 >gi|259908618|ref|YP_002648974.1| peptide chain release factor 1 [Erwinia pyrifoliae Ep1/96] gi|224964240|emb|CAX55747.1| Peptide chain release factor 1 (RF-1) [Erwinia pyrifoliae Ep1/96] Length = 360 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 111/337 (32%), Positives = 174/337 (51%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + ++ Q D + Sbjct: 9 LEALQERHEEVEALLGDAGVIADQERFRALSREYAQLTDVSRCFRQWQQCQEDMATAEMM 68 Query: 76 ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E + Q L D + YLEV AG GG E+ +A Sbjct: 69 LGDAEMREMAQEELQAARAASDELQQQLQVLLLPKDPDDERNCYLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R++K E + ++GE G K + G AYG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEYRRWKVEVMSANEGEHGGYKEVIAKVIGEGAYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ +I+ SD +IDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A +L +++ E+ +R++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARRQQE--ESSTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ + ++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTIYRLDEAMEGKLDALIE 342 >gi|154500225|ref|ZP_02038263.1| hypothetical protein BACCAP_03889 [Bacteroides capillosus ATCC 29799] gi|150270957|gb|EDM98231.1| hypothetical protein BACCAP_03889 [Bacteroides capillosus ATCC 29799] Length = 355 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 105/348 (30%), Positives = 178/348 (51%), Gaps = 9/348 (2%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + L + P + + L +E+ L+ + + R D Sbjct: 1 MLDKLRSLELHYEDLVARLNAPETYGDPALVAKLNKEQSELEPLVETYRRYIRRQQDMEE 60 Query: 72 LLELALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L + D +E + + + + + L + D + +E+ AG GG E+ Sbjct: 61 ARSLMSDPDMKELAQEEFAQAKEEAEELEQKMKILLLPTDPNDGKNVIVEIRAGVGGEEA 120 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +AN L RMY+ +AE R +K E +++ E GIK + ++G AY LK E GVHR+ Sbjct: 121 ALFANSLYRMYSMYAETRHWKVEVASLNETELGGIKEISFTVEGGGAYSRLKFESGVHRV 180 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS ++ V P + ++++I+ +D + +R+SGAGGQH+N T SAV Sbjct: 181 QRVPETESGDRIHTSTVTVAVLP-EAEEVDVDINPADIEMQVFRSSGAGGQHINKTSSAV 239 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+ H PTG+VV+CQQERSQ +N+ +A +LR++LYE E Q+ E ++++G G Sbjct: 240 RLIHKPTGMVVECQQERSQFQNRDKAMQILRSRLYEAEQQRVSAE--WSEERRSQVGTGM 297 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + DV++GDLD+ + + + + Sbjct: 298 RNERIRTYNF-PQGRLTDHRIGLTLYKLEDVMNGDLDEIIDSLITADQ 344 >gi|206901386|ref|YP_002250520.1| peptide chain release factor 1 [Dictyoglomus thermophilum H-6-12] gi|226739102|sp|B5YDB2|RF1_DICT6 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|206740489|gb|ACI19547.1| peptide chain release factor 1 [Dictyoglomus thermophilum H-6-12] Length = 367 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 114/347 (32%), Positives = 185/347 (53%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + + ++ + L++ER ++ + E + L + L + Sbjct: 10 LEEIEKRFKEIENLLTKEEIISDLSRYQSLLKERAKIEEIVEKFSEYKKLLKEREDLEVM 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQF----ESLLSGEADSNDAYLEVHAGAGGTESQ 131 EE D + L+ I+ ++E +F L D + +E+ AG GG E+ Sbjct: 70 TKEEQDEDLRSLAEAELEEIEKKLEKIEFDLKALLLPKDPNDEKNIIMEIRAGTGGEEAA 129 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY +A+K+ +K E + + G K +++G AY LK E GVHR+ Sbjct: 130 LFAADLFRMYVGYAQKKGWKVEIVSSNPTGLGGYKEIIFIVEGKGAYSRLKFESGVHRVQ 189 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S+ R HTS +++ V P + +++EI D RI+T+R+ GAGGQHVN T+S VR Sbjct: 190 RVPITESSGRIHTSTATVAVLP-EMEEVDVEIDPKDLRIETFRSGGAGGQHVNKTESGVR 248 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIP+G+VVQCQ ERSQH+N+ +A +LRA+LYE +RE+ I + ++G G + Sbjct: 249 ITHIPSGIVVQCQDERSQHQNREKAMKVLRARLYEYY--QREKENEIASQRRQQVGTGER 306 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + V D R N +VL G+LD+F+ + +K Sbjct: 307 SEKIRTYNF-PQRRVTDHRINYSSFQLEEVLSGELDEFIDRLILAEK 352 >gi|238899147|ref|YP_002924829.1| peptide chain release factor RF-1 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259585226|sp|C4K7Y8|RF1_HAMD5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|229466907|gb|ACQ68681.1| peptide chain release factor RF-1 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 360 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 121/344 (35%), Positives = 175/344 (50%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R L DP Q+ +M+ RE L N E D + L Sbjct: 9 LEALQERHEELQAHLADPLTIQDQERFRMMSREYAQLSNIAELFTEWLKLQNDMIAAKSL 68 Query: 76 ALEEDDCSILQET-SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + E + + + Q L DS +LE+ AG GG E+ +A Sbjct: 69 LQDPEMHEMATEELEKAKIQSEQLTQQLQILLLPKDIDDSRSCFLEIRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+AE R +K E + H+GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYARYAESRSWKMEIISAHEGEHGGYKEMITKISGEGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + + +I+ SD RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 TTESQGRIHTSACTVAVMPEIPEEELPKITLSDLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI-- 312 +PTG+VV+CQ ERSQHKNKA+A ++L A+++ ++QKR++ + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKAMSVLGARMHAAQVQKRQQAQ--ASERRNLLGSGDRSDR 306 Query: 313 -RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R+Y P V D R N+ +V+ G LD + L + Sbjct: 307 HRTYNF-PQGRVTDHRINLTLYRLDEVMSGKLDILIHPLLREHQ 349 >gi|82544335|ref|YP_408282.1| peptide chain release factor 1 [Shigella boydii Sb227] gi|187734065|ref|YP_001879994.1| peptide chain release factor 1 [Shigella boydii CDC 3083-94] gi|119361607|sp|Q31ZQ4|RF1_SHIBS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238691757|sp|B2TZV9|RF1_SHIB3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|81245746|gb|ABB66454.1| peptide chain release factor RF-1 [Shigella boydii Sb227] gi|187431057|gb|ACD10331.1| peptide chain release factor 1 [Shigella boydii CDC 3083-94] gi|320185614|gb|EFW60376.1| Peptide chain release factor 1 [Shigella flexneri CDC 796-83] gi|332094801|gb|EGI99845.1| peptide chain release factor 1 [Shigella boydii 3594-74] Length = 360 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 114/344 (33%), Positives = 179/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ ++ + + Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQDELRKAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + D+ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R+Y P V D R N+ +V++G LD ++ + + Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 349 >gi|307111728|gb|EFN59962.1| hypothetical protein CHLNCDRAFT_133064 [Chlorella variabilis] Length = 426 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 133/357 (37%), Positives = 209/357 (58%), Gaps = 4/357 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++ + D + +R++ L LW+ A ++++ L ++ ++ Sbjct: 51 ELQERIQDAVKVADLPSLKRRMAELEEAAGASDLWEQRARATAVLQQLTALREEVAALER 110 Query: 62 IQDRLCDN---LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 +L D + LLE+ E ++ E + +E + LL G D A Sbjct: 111 FCGQLEDLGVAMELLEMEDEAGAQAMAAEAGSICDGLAAGLEAWELRRLLGGPYDDRGAV 170 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 L + AGAGGT++QDWA ML RMY RWAEK+ +T ++ GEEAGIKS + + G AY Sbjct: 171 LTIQAGAGGTDAQDWAEMLERMYLRWAEKQGHRTRVVDRQQGEEAGIKSVEIEVDGRYAY 230 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASG 237 G+L GE+G HRLVR SP+++ + R TSF+++ V P++ + E+E+ ESD I T R++G Sbjct: 231 GYLHGEKGTHRLVRQSPFNAKAARQTSFAAVEVMPMLGELVDEVELPESDLEITTMRSAG 290 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 AGGQ+VN ++AVRI H+PTG+ V+CQ ERSQ +NK+ A ML+AKL + +++ + Sbjct: 291 AGGQNVNKVETAVRIKHLPTGIAVKCQMERSQAQNKSIALGMLKAKLLVVAQEQQLQEVA 350 Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG+QIR+YV PY++VKD+RT E + + V+DG+L FM+A L + Sbjct: 351 EIRGDLVKAEWGQQIRNYVFHPYKLVKDVRTGQETSDVAGVMDGELQPFMQAYLQHR 407 >gi|317130773|ref|YP_004097055.1| peptide chain release factor 1 [Bacillus cellulosilyticus DSM 2522] gi|315475721|gb|ADU32324.1| peptide chain release factor 1 [Bacillus cellulosilyticus DSM 2522] Length = 357 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 107/352 (30%), Positives = 184/352 (52%), Gaps = 13/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68 +FD + +R LN DP + + + + +E+ ++ + +E + + D Sbjct: 1 MFDRLEAVEERYERLNELLMDPDVISDTKKLRDYSKEQSDIEETVQTFREYKEIKKQYTD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF--ESLLSGEADSNDAYLEVHAGAG 126 +L+ +D+ + + + ++ ++ L D + +E+ AG Sbjct: 61 AKTMLKEEDLDDEMYEMVKMEMDELEDQIPPLEEKLRVLLLPKDPNDDKNVIVEIRGAAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L RMY+R+AE + ++ E +E + + G K +I G AY +K E G Sbjct: 121 GDEAALFAGDLYRMYSRYAEAQGWRPEVIEASENDIGGYKEIIFMINGKGAYSKMKYENG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P + +E++I+E D R+DT+ +SG GGQ VNTT Sbjct: 181 AHRVQRVPTTESGGRIHTSTATVAVLP-EAEEVEVDINEKDIRVDTFASSGPGGQSVNTT 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+THIPTGVVV CQ E+SQ KNK +A +LRA++Y+ ++E A ++ K+ + Sbjct: 240 MSAVRLTHIPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKF--RKEAEAEYAQNRKSAV 297 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R + +L+G LD+ A + ++ Sbjct: 298 GTGDRSERIRTYNF-PQSRVTDHRIGLTLQKLDQILEGKLDEITDALIVEEQ 348 >gi|89095600|ref|ZP_01168494.1| peptide chain release factor 1 [Bacillus sp. NRRL B-14911] gi|89089346|gb|EAR68453.1| peptide chain release factor 1 [Bacillus sp. NRRL B-14911] Length = 357 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 107/347 (30%), Positives = 176/347 (50%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72 R LN DP + + + + +E+ + + +E ++ + D + Sbjct: 5 LQAVEDRYERLNELLSDPEIVNDTKKLREYSKEQSGIQETVEAYREYKEVRGQYQDAKAM 64 Query: 73 LELALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LE L+ + +++E R++ + + D + +E+ AGG E+ Sbjct: 65 LEEKLDAEMREMVKEEIGELEDRVEALEARLKILLIPKDPNDDKNVIMEIRGAAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AE + +KT+ +E G K +I G A+ LK E G HR+ Sbjct: 125 LFAGDLYRMYSRFAEVQGWKTDVIEASSTGVGGYKEIIFIINGNGAFSKLKFENGAHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + +EIEI + D R+DT+ +SG GGQ VNTT SAVR Sbjct: 185 RVPETESGGRIHTSTATVAVLP-EAEEVEIEIHDKDIRVDTFASSGPGGQSVNTTMSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG VV CQ E+SQ KNK +A +LRA++Y+ ++E A + K+ +G G Sbjct: 244 LTHLPTGTVVSCQDEKSQIKNKEKAMKVLRARVYDKF--QQEAQAEYDQQRKSAVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + ++ Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDEVIDALIMEEQ 347 >gi|329897171|ref|ZP_08271911.1| Peptide chain release factor 1 [gamma proteobacterium IMCC3088] gi|328921326|gb|EGG28720.1| Peptide chain release factor 1 [gamma proteobacterium IMCC3088] Length = 361 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 113/341 (33%), Positives = 174/341 (51%), Gaps = 9/341 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R ++ D N + L RE L+ ++ K Q D + Sbjct: 9 LELLVERHEEVSALLSDAETISNQERFRELSREYSELEEVVATFKRYQTAKDDMEAAQLM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEV---EYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L++D + + Q L DS + +LE+ AG GG E+ Sbjct: 69 LLDDDPDMREMAEEELDAAKEAIEALEIELQRLLLPKDPKDSANVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AE+ K++ E L GE G K ++G + Y LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAERMKWRLEVLSERAGEHGGYKEIITRVEGRDVYAHLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V + IEI+++D R+DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRIHTSACTVAVMAEAAEVDAIEINKADIRVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ ERSQHKN+A+A ++L+AKL +K + + + +G G Sbjct: 249 THLPTGIVVECQDERSQHKNRARAMSLLQAKLDTAAEEK--AASEQAQERRNLVGTGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P + D R N+ ++++GDLD + Sbjct: 307 DRIRTYNF-PQGRMTDHRINLTLYKLDEIMEGDLDSVVTPL 346 >gi|330686486|gb|EGG98080.1| putative peptide chain release factor 2 [Staphylococcus epidermidis VCU121] Length = 271 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 148/267 (55%), Positives = 192/267 (71%), Gaps = 1/267 (0%) Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 +N+ K E+++ + + LL G D+N+A LE+H GAGGTESQDW +MLLRMY R+ E+ Sbjct: 2 ENNVIEFKSEIDHFELQLLLDGPYDANNAILELHPGAGGTESQDWVSMLLRMYQRYCEQS 61 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S Sbjct: 62 GFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 121 Query: 209 IWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P +D IEIEI+ D +DT+RASGAGGQH+N T+SA+RITH PTG+VV Q ER Sbjct: 122 CDVIPDFDNDEIEIEINSDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 181 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ KN+ A ML++KLY+L+L+++E + EIGWG QIRSYV PY MVKD R Sbjct: 182 SQIKNREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 241 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354 TN E V+DGD+ F++A L + Sbjct: 242 TNEETGKVDAVMDGDIGPFIEAYLRHQ 268 >gi|152977515|ref|YP_001377032.1| peptide chain release factor 1 [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189039958|sp|A7GV79|RF1_BACCN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|152026267|gb|ABS24037.1| peptide chain release factor 1 [Bacillus cytotoxicus NVH 391-98] Length = 355 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 111/351 (31%), Positives = 174/351 (49%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D R LN DP + + + + +E+ + + +E +D Sbjct: 1 MLDRLQAVEDRYEKLNELLSDPAVINDSNKLREYSKEQSDIQETVEVYREYKDVREQLQD 60 Query: 72 LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + ++ D + + + + K + + + D + +E+ AGG Sbjct: 61 AKAMLEDKLDAEMREMVKEEVSDLEVQEKELSDRLKILLVPKDPNDDKNVIVEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE + +KT+ +E E G K +I G AY LK E G Sbjct: 121 DEAALFAGDLYRMYSRYAEMQGWKTDIIEASYTELGGYKEIIFMINGKGAYAKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +EI+I E D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EAEEVEIDIHEKDIRVDTFASSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K +G Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFRQ--EAQAEYDQNRKQAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L G LDDF+ A + + Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 347 >gi|228474912|ref|ZP_04059641.1| peptide chain release factor 1 [Staphylococcus hominis SK119] gi|228271144|gb|EEK12524.1| peptide chain release factor 1 [Staphylococcus hominis SK119] Length = 358 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 116/351 (33%), Positives = 187/351 (53%), Gaps = 13/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D +R LN DP + + + + +E+ L + ++ + + + Sbjct: 1 MFDQLDIVEERYEQLNEMLSDPEIVNDPDKLRKYSKEQADLQKTVDVYRDYKSKREEVAE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 + E+ E DD ++ + +K E+ + F + D D +E+ A AGG Sbjct: 61 IDEMLTETDDKEEIEMLKEEALGLKSELPELEEQLKFLLIPKDPNDEKDVIVEIRAAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A LLRMYT++AE + FKTE +E + + G K + + G AY LK E G Sbjct: 121 DEAAIFAGDLLRMYTKYAESQNFKTEIVEAAESDHGGYKEISFSVSGSGAYSKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +EIE+ D +IDTYR+SGAGGQHVNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEVRNEDLKIDTYRSSGAGGQHVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTG++ E+SQ +N+ +A +L+A+LY+++LQ EE K+ +G Sbjct: 240 SAVRITHIPTGIIATSS-EKSQIQNREKALKVLKARLYDMKLQ--EEQQKYAAQRKSAVG 296 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G ++R+Y P V D R + +++G LD+ + A ++ Sbjct: 297 TGDRSERVRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIIDALTLSEQ 346 >gi|290475215|ref|YP_003468101.1| peptide chain release factor RF-1 [Xenorhabdus bovienii SS-2004] gi|289174534|emb|CBJ81328.1| peptide chain release factor RF-1 [Xenorhabdus bovienii SS-2004] Length = 360 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 113/340 (33%), Positives = 176/340 (51%), Gaps = 7/340 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L +E L + K + D + Sbjct: 9 LEALQERHEEILVHLGDASVIADQDRFRALSKEYAQLTDVTHCFKSWKTVQEDLQTAEMM 68 Query: 76 ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E D R + + Q L D + +LEV AG GG E+ +A Sbjct: 69 LDDLEMREMAQEELKDAKIRNEELEQQLQLLLLPKDPDDERNCFLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + ++GE G K + G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRVEIISANEGEHGGYKEVIAKVSGDQVYGHLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ +IS D +IDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVMPEIPEAELPDISPGDLKIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR+E + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKAMSVLAARIRAAEMHKRQE--AEASERRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R+Y P V D R N+ +V++G LD ++ + Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVIEGKLDMLIQPII 345 >gi|261212226|ref|ZP_05926512.1| peptide chain release factor 2 [Vibrio sp. RC341] gi|260838834|gb|EEX65485.1| peptide chain release factor 2 [Vibrio sp. RC341] Length = 300 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 166/297 (55%), Positives = 217/297 (73%), Gaps = 1/297 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + I ++ + D LLELA+E +D E L +++++E +F + SG+ DS+ Sbjct: 2 VDTIDQLDRGVDDVEGLLELAIEAEDQETFDEIGPELDELEVKLEQLEFRRMFSGDHDSS 61 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 D YL++ AG+GGTE+QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G Sbjct: 62 DCYLDLQAGSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGD 121 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 AYGWL+ E GVHRLVR SP+DS RRHTSF+S ++YP VD++I+IEI+ +D RID YRA Sbjct: 122 YAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRA 181 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK QA LRAKL+ELELQK+ Sbjct: 182 SGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAE 241 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E +K++IGWG QIRSYVL +KDLRT IE + VLDGDLD F++A+L Sbjct: 242 KQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDKFIEASLK 297 >gi|229176005|ref|ZP_04303501.1| Peptide chain release factor 1 [Bacillus cereus MM3] gi|228607498|gb|EEK64824.1| Peptide chain release factor 1 [Bacillus cereus MM3] Length = 358 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 114/352 (32%), Positives = 174/352 (49%), Gaps = 12/352 (3%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 G+ D R LN DP + + + + +E+ + + +E +D Sbjct: 3 GVLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQLR 62 Query: 71 ILLELALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 + ++ D + + + + K E + + D + +EV AG Sbjct: 63 DAKAMLEDKLDADMRDMVKEEVSELEGQDKELSERLKILLVPKDPNDDKNVIVEVRGAAG 122 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L RMY+R+AE + +KTE +E E G K +I G A+ LK E G Sbjct: 123 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 182 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P + +EI I E D R+DT+ +SG GGQ VNTT Sbjct: 183 AHRVQRVPETESGGRIHTSTATVAVLP-EAEEVEISIHEKDVRVDTFASSGPGGQSVNTT 241 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K + Sbjct: 242 MSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAV 299 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R + +L G LDDF+ A + + Sbjct: 300 GTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350 >gi|328555408|gb|AEB25900.1| peptide chain release factor 1 [Bacillus amyloliquefaciens TA208] gi|328913779|gb|AEB65375.1| peptide chain release factor 1 [Bacillus amyloliquefaciens LL3] Length = 356 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 114/351 (32%), Positives = 185/351 (52%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68 + D + QR LN DP + + + + +E+ + + ++ +D +L D Sbjct: 1 MLDRLQSIEQRYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVEVYRQYRDASEQLAD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127 +LE L+ D +++E LQR + + + + D + +E+ AGG Sbjct: 61 AKAMLEDKLDADMREMVKEEISELQRETETLSERLKVLLIPKDPNDDKNVIMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE + +KTE +E G K +I G AY LK E G Sbjct: 121 EEAALFAGNLYRMYSRYAEVQGWKTEVMEASVTGTGGYKEIIFMITGKGAYSKLKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ P + +E++I E D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLP-EAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ ++E A ++ K+ +G Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKF--QQEAQAEYDQNRKSAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L+G LD+ ++A + + Sbjct: 298 SGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQ 347 >gi|30265352|ref|NP_847729.1| peptide chain release factor 1 [Bacillus anthracis str. Ames] gi|42784501|ref|NP_981748.1| peptide chain release factor 1 [Bacillus cereus ATCC 10987] gi|47530891|ref|YP_022240.1| peptide chain release factor 1 [Bacillus anthracis str. 'Ames Ancestor'] gi|222098801|ref|YP_002532859.1| peptide chain release factor 1 [Bacillus cereus Q1] gi|46576768|sp|Q81JX1|RF1_BACAN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|61214595|sp|Q630R9|RF1_BACCZ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|61214623|sp|Q6HAV4|RF1_BACHK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|61214641|sp|Q72XC2|RF1_BACC1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790861|sp|B9IRW2|RF1_BACCQ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|30260030|gb|AAP29215.1| peptide chain release factor 1 [Bacillus anthracis str. Ames] gi|42740433|gb|AAS44356.1| peptide chain release factor 1 [Bacillus cereus ATCC 10987] gi|47506039|gb|AAT34715.1| peptide chain release factor 1 [Bacillus anthracis str. 'Ames Ancestor'] gi|221242860|gb|ACM15570.1| peptide chain release factor 1 [Bacillus cereus Q1] Length = 355 Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats. Identities = 117/351 (33%), Positives = 182/351 (51%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68 + D R LN DP + + + + +E+ + + +E +D +L D Sbjct: 1 MLDRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQLKD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127 +LE L+ + +++E L+ + + + + + D + +EV AGG Sbjct: 61 AKAMLEDKLDAEMREMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE + +KTE +E E G K +I G A+ LK E G Sbjct: 121 DEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +EI+I E D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K +G Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L G LDDF+ A + + Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 347 >gi|289207525|ref|YP_003459591.1| peptide chain release factor 1 [Thioalkalivibrio sp. K90mix] gi|288943156|gb|ADC70855.1| peptide chain release factor 1 [Thioalkalivibrio sp. K90mix] Length = 361 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 114/342 (33%), Positives = 174/342 (50%), Gaps = 9/342 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72 + +R + + P ++ + + L +E L+ K Q L + + Sbjct: 9 LEGLAERHAEIAQLLATPDAAEDADQLRRLSQEYSQLEPVAEAWKAWHDNQAALEEARAM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L E E + + + D+ + +LE+ AG GG E+ Sbjct: 69 LAEDDPELRAMAEAEIETLADQAEALEAELHRHLIPKDPHDNANVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A LLRMYTR+AE++ +K E L +GE G + + G AY LK E G HR+ R Sbjct: 129 FAGDLLRMYTRYAEQQNWKLEILSASEGEHGGYREVIARLAGQGAYSRLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS +++ + P +D+ +I+ +D R+DT+RASGAGGQHVN TDSAVR+ Sbjct: 189 VPETESQGRIHTSAATVAILPELDEVEMPDINPADLRVDTFRASGAGGQHVNKTDSAVRL 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ+ERSQHKN+A+A L A+L+E E + A K+ +G G Sbjct: 249 THLPTGIVVECQEERSQHKNRAKAMTYLAARLFEAER--EAQAAAQSAERKSLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R N+ V+ GDLD + + Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYKLEQVMAGDLDPVIDPLI 347 >gi|227524270|ref|ZP_03954319.1| peptide chain release factor 1 [Lactobacillus hilgardii ATCC 8290] gi|227088501|gb|EEI23813.1| peptide chain release factor 1 [Lactobacillus hilgardii ATCC 8290] Length = 361 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 108/352 (30%), Positives = 181/352 (51%), Gaps = 13/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68 +FD V R LN DP + + L +E L + ++ + + +L D Sbjct: 4 IFDKLQAVVDRYDELNELISDPEVIADTQRFMKLSKEEGELRDTVAAYNKYKEVSKQLDD 63 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAG 126 + +L +++ D + + + + + Q + + D + +E+H AG Sbjct: 64 DEEMLREKIDDADLESMVKDEISDFKDQKAKLEDQLKVMLLPKDPNDEKNIIMEIHGAAG 123 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E +A L MY+++AE++ +K E ++ + E G K L+I G Y LK E G Sbjct: 124 GDEGSLFAVDLFSMYSKYAERQGWKVEVIDKSETEVGGFKEIVLMITGDKVYSKLKYENG 183 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P ++ ++I+I D R+D YR+SGAGGQH+N T Sbjct: 184 AHRVQRVPVTESAGRVHTSTATVGVMP-EEEDVDIDIDPKDIRVDVYRSSGAGGQHINKT 242 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+TH+PTG+VV Q ERSQ +N+A+A +L+A++Y+ Q+ E K+ I Sbjct: 243 SSAVRMTHLPTGIVVAMQDERSQQQNRAKAMKILKARVYDYYAQQ--EQDQYNAERKSAI 300 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R + +++G+LDD + A + + Sbjct: 301 GTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMNGELDDIVDALILSDQ 351 >gi|242241525|ref|ZP_04795970.1| peptide chain release factor 1 [Staphylococcus epidermidis W23144] gi|242235068|gb|EES37379.1| peptide chain release factor 1 [Staphylococcus epidermidis W23144] gi|319399600|gb|EFV87855.1| peptide chain release factor 1 [Staphylococcus epidermidis FRI909] Length = 358 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 113/351 (32%), Positives = 185/351 (52%), Gaps = 13/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D +R LN DP + + + + +E+ L + + + + + Sbjct: 1 MFDQLDIVEERYEQLNELLSDPDVVNDADKLRKYSKEQADLQKTVDVYRSYKTKKEELQD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 + ++ E D ++ + +K E+ + + D D +E+ A AGG Sbjct: 61 IEDMLSETSDKEEVEMLKEESSALKTELPDMEEELKILLIPKDPNDDKDVIVEIRAAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L+RMY+++AE FKTE +E + + G K + + G AY LK E G Sbjct: 121 DEAAIFAGDLMRMYSKYAEANGFKTEIVEASESDHGGYKEVSFSVSGTGAYSKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +EIEI D +IDTYR+SGAGGQHVNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EAEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTGV+ E+SQ +N+ +A +L+A+LY+++LQ EE K+ +G Sbjct: 240 SAVRITHLPTGVIATSS-EKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYASQRKSAVG 296 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + + +++G LD+ ++A ++ Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLNQIMEGHLDEIVEALTLSEQ 346 >gi|310766541|gb|ADP11491.1| peptide chain release factor 2 [Erwinia sp. Ejp617] Length = 300 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 167/298 (56%), Positives = 214/298 (71%), Gaps = 1/298 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + + ++ L D LLELA+E +D E L + ++ +F + SGE DS Sbjct: 2 VETLDQMTQGLEDVSGLLELAVEAEDEETFNEAVAELDGLDKKLGELEFRRMFSGEYDSA 61 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 D Y+++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E DGE AG KSAT+ I G Sbjct: 62 DCYMDIQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGEVAGTKSATIKIIGD 121 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A+GWL+ E GVHRLVR SP+DS RRHTSFSS+++YP VDD+I+IEI+ +D RID YRA Sbjct: 122 YAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEINPADLRIDVYRA 181 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+ LRAKLYE E+QK+ Sbjct: 182 SGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNAD 241 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 E +K++IGWG QIRSYVL +KDLRT++E + VLDGDLD F++A+L Sbjct: 242 KQTAEDNKSDIGWGSQIRSYVLDD-SRIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 298 >gi|291543206|emb|CBL16315.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus sp. 18P13] Length = 361 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 115/352 (32%), Positives = 182/352 (51%), Gaps = 13/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ Q+ ++ + DP + ++ LM+E ++L+ + + + Sbjct: 1 MFEKLQIMEQKFEEISQRLSDPAVTTDIAVYTQLMKEYKNLEPIVQKYRAYKRSAQSMQE 60 Query: 72 LLEL-----ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 EL E E +++ E + L D + +E+ GAG Sbjct: 61 ARELLDAGSEDPELREMAQAEFETEKEQLAEYAEQLKILLLPKDPNDDRNVIIEIRGGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +AN L RMYT +AE R +K E L + E G K + I G AY LK E G Sbjct: 121 GEEAALFANSLYRMYTMYAESRGWKQEVLSANPTELGGFKEISFSITGEGAYSRLKYESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S R HTS ++ V V D +E+ I+ +D +ID +R+SGAGGQH+N T Sbjct: 181 VHRVQRVPETESQGRIHTSTVTVAVL-VEADEVELAINPTDLKIDVFRSSGAGGQHINKT 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRITH+PTG+VV+CQ ERSQ KNK +A +LR++LYE Q++++ I + ++ Sbjct: 240 ESAVRITHLPTGLVVECQDERSQFKNKDRAMMILRSRLYERMQQEQQD--KIASQRRMQV 297 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P + D R + DV++G+LD+ + A + Sbjct: 298 GTGDRSERIRTYNF-PQGRLTDHRIGLTIYRLEDVMNGNLDEVLDALATADQ 348 >gi|319893069|ref|YP_004149944.1| Peptide chain release factor 1 [Staphylococcus pseudintermedius HKU10-03] gi|317162765|gb|ADV06308.1| Peptide chain release factor 1 [Staphylococcus pseudintermedius HKU10-03] Length = 358 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 115/351 (32%), Positives = 180/351 (51%), Gaps = 13/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D +R LN DP + + + +E+ L + ++ + D Sbjct: 1 MFDQLDIVEERYEQLNELLSDPEVVSDSNLLRKYSKEQSELQKTVEVYRQYKQVKEDAEE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGG 127 + + E DD ++ + +K EV + + D D +E+ AGG Sbjct: 61 IELMLAETDDADEVEMLKEEASALKAEVPELEEQLKLLLIPKDPNDEKDVIVEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+++AE +FK E +E + + G K + + G AY LK E G Sbjct: 121 DEAAIFAGDLFRMYSKFAESHRFKLEIVEATESDHGGYKEISFSVSGDGAYSKLKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +EIEI D +IDTYR+SGAGGQHVNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTGV+ E+SQ +N+ +A +L+A+LY+++LQ EE K+ +G Sbjct: 240 SAVRITHIPTGVIATSS-EKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYAAQRKSAVG 296 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++G LD+ + A ++ Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIVDALTMHEQ 346 >gi|226307404|ref|YP_002767364.1| peptide chain release factor 1 [Rhodococcus erythropolis PR4] gi|229489997|ref|ZP_04383850.1| peptide chain release factor 1 [Rhodococcus erythropolis SK121] gi|226186521|dbj|BAH34625.1| peptide chain release factor 1 [Rhodococcus erythropolis PR4] gi|229323098|gb|EEN88866.1| peptide chain release factor 1 [Rhodococcus erythropolis SK121] Length = 359 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 116/346 (33%), Positives = 174/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ + + L + DP L + A+ + + L +S ++ D EL Sbjct: 10 IDDILAEHAGLEAQMSDPALHNDPAAARRVGKRFSELSPIMSTYNKLTAAQDDLEAAREL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A ++ + + + Q D +D LEV +G GG ES +A+ Sbjct: 70 AADDSSFAAEIPDLEAEVAQLEQTLTDQL--APRDPHDGDDIVLEVKSGEGGEESALFAS 127 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190 L RMY R+AE+ ++ E L+ + G K ATL IK + LK E GVHR+ Sbjct: 128 DLARMYVRYAERHGWRVEILDATVSDLGGYKEATLSIKSKSDTPDGVWARLKFEGGVHRV 187 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS + + VYP ++ +++I ESD RID YR+SG GGQ VNTTDSAV Sbjct: 188 QRVPVTESQGRVHTSAAGVLVYPEPEEVEQVQIDESDLRIDVYRSSGKGGQGVNTTDSAV 247 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG+VV CQ ERSQ +NKA+A +L A+L + + + A+ G S+ + Sbjct: 248 RITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQVVAEEAADAEASAGRQSQVRTVDRS 307 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + + VLDG+LD + A + Sbjct: 308 ERIRTYNF-PENRITDHRIGFKSHNLDAVLDGELDALLDALGKADR 352 >gi|254521932|ref|ZP_05133987.1| peptide chain release factor 2 [Stenotrophomonas sp. SKA14] gi|219719523|gb|EED38048.1| peptide chain release factor 2 [Stenotrophomonas sp. SKA14] Length = 308 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 162/295 (54%), Positives = 212/295 (71%), Gaps = 1/295 (0%) Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 I + D L D LLELA E D +L + + VE +F+ + SGE D+ A+ Sbjct: 4 IASVLDGLTDATELLELAESEQDEDTALAVVADLDKHQAHVEKLEFQRMFSGEMDNAAAF 63 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +++ AGAGGTE+QDWA +LLRMY RW E R +KTE +E+ G+ AGIKSATL ++G AY Sbjct: 64 VDIQAGAGGTEAQDWAEILLRMYLRWCESRGWKTELMEVSGGDVAGIKSATLRVEGDYAY 123 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 GWLK E GVHRLVR SP+DS++RRHTSF+S++V P +DD+I+I I+ +D R D YR+SGA Sbjct: 124 GWLKTETGVHRLVRKSPFDSDNRRHTSFTSVFVSPEIDDNIDITINPADLRTDVYRSSGA 183 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVN T+SAVRITHIPT +VV CQ RSQH+N+ A ML AKLYELE+QKR + Sbjct: 184 GGQHVNKTESAVRITHIPTNIVVACQTGRSQHQNRDNAMKMLAAKLYELEIQKRNAEKDA 243 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 E++K++IGWG QIR+YVL +KDLRT IE++ VLDGDLD+F++A+L Sbjct: 244 VEATKSDIGWGSQIRNYVLD-QSRIKDLRTGIERSDTQKVLDGDLDEFVEASLKA 297 >gi|310767482|gb|ADP12432.1| peptide chain release factor 1 [Erwinia sp. Ejp617] Length = 360 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 111/337 (32%), Positives = 174/337 (51%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + ++ Q D + Sbjct: 9 LEALQERHEEVEALLGDAGVIADQERFRALSREYAQLTDVSRCFRQWQQCQEDMATAEMM 68 Query: 76 ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E + Q L D + YLEV AG GG E+ +A Sbjct: 69 LGDAEMREMAQEELQAARAASDELQQQLQVLLLPKDPDDERNCYLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R++K E + ++GE G K + G AYG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESRRWKVEVMSANEGEHGGYKEVIAKVIGEGAYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ +I+ SD +IDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A +L +++ E+ +R++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARRQQE--ESSTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ + ++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTIYRLDEAMEGKLDALIE 342 >gi|237740336|ref|ZP_04570817.1| peptide chain release factor 1 [Fusobacterium sp. 2_1_31] gi|229422353|gb|EEO37400.1| peptide chain release factor 1 [Fusobacterium sp. 2_1_31] Length = 357 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 119/351 (33%), Positives = 184/351 (52%), Gaps = 11/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + V R LN P + + + + + + KE + + D Sbjct: 1 MFDKLEEVVARYEELNQMLVSPEVLADSKKMIECNKAINEITEIVEKYKEYKKYVDDIEF 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGG 127 + E E D + + ++ L+ + ++ + L + D + +E+ GAGG Sbjct: 61 IKESFKTEKDPDMKEMLNEELKEAEEKLPSLEEELKILLLPKDKNDDKNVIVEIRGGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE++K+K E +E DGE G+K I G AY LK E GV Sbjct: 121 DEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELNGLKEVAFTIIGLGAYSRLKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +++ R HTS +++ V P V+D E+ + D +IDTYR+ GAGGQHVN TD Sbjct: 181 HRVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVTVDPKDLKIDTYRSGGAGGQHVNMTD 240 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VVQCQ ERSQ KN+ +A L KLYE+E +K+ + ++G Sbjct: 241 SAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQRSEVE--SERRLQVG 298 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P + D R + LDGD+D+ + A + + Sbjct: 299 TGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQ 348 >gi|188534903|ref|YP_001908700.1| Putative peptide chain release factor 2 [Erwinia tasmaniensis Et1/99] gi|188029945|emb|CAO97829.1| Putative peptide chain release factor 2 [Erwinia tasmaniensis Et1/99] Length = 300 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 167/298 (56%), Positives = 214/298 (71%), Gaps = 1/298 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + + ++ L D LLELA+E +D E L + ++ +F + SGE DS Sbjct: 2 VDTLDQMTQGLEDVSGLLELAVEAEDEETFNEAVAELDGLDKKLAELEFRRMFSGEYDSA 61 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 D Y+++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E DGE AG KSAT+ I G Sbjct: 62 DCYMDIQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGEVAGTKSATIKIIGD 121 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A+GWL+ E GVHRLVR SP+DS RRHTSFSS+++YP VDD+I+IEI+ +D RID YRA Sbjct: 122 YAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEINPADLRIDVYRA 181 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+ LRAKLYE E+QK+ Sbjct: 182 SGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNAD 241 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 E +K++IGWG QIRSYVL +KDLRT++E + VLDGDLD F++A+L Sbjct: 242 KQTAEDNKSDIGWGSQIRSYVLDD-SRIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 298 >gi|302392966|ref|YP_003828786.1| bacterial peptide chain release factor 1 (bRF-1) [Acetohalobium arabaticum DSM 5501] gi|302205043|gb|ADL13721.1| bacterial peptide chain release factor 1 (bRF-1) [Acetohalobium arabaticum DSM 5501] Length = 359 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 117/354 (33%), Positives = 185/354 (52%), Gaps = 15/354 (4%) Query: 13 LFD----WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 + D D+A R L DP + N + + L +E L + ++ ++ + + Sbjct: 1 MLDCKEALDDAEARYEKLQKMLSDPEVINNQSKFQKLSKEHAELKKLVKKYRKYKEIMAE 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAG 124 EL EDD ++ L ++ + E + + D + +E+ AG Sbjct: 61 IEEAKELLEMEDDEEAVELAKMELAELEPKQEKLEEELPLMLIPEDPNDEKNVIVEIRAG 120 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 GG E+ +A L RMY+R+AEK+ + + + E G K +++G AY LK E Sbjct: 121 TGGDEAALFAGELYRMYSRYAEKQDWDVDIMSSSSSEVGGFKEMIFVVEGKGAYSRLKYE 180 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ +S+ R HTS +++ V P + ++IEI+++D I+TYR+SG GGQ VN Sbjct: 181 SGVHRVQRVPETESSGRIHTSTATVAVLP-EAEDVDIEINQNDLTIETYRSSGPGGQSVN 239 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVRITH PTGVVV CQ E+SQHKNK +A +LR+++ E E+ A E K Sbjct: 240 TTDSAVRITHEPTGVVVSCQDEKSQHKNKRKAMRVLRSRIQEKIE--AEKQAEEAEKRKM 297 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IG G +IR+Y P + D R N+ +LDG++D+ + + + Sbjct: 298 QIGSGGRSERIRTYNF-PQGRITDHRINLTTHQMESILDGEIDELVDELVTADQ 350 >gi|170768314|ref|ZP_02902767.1| peptide chain release factor 1 [Escherichia albertii TW07627] gi|170123080|gb|EDS92011.1| peptide chain release factor 1 [Escherichia albertii TW07627] Length = 360 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 114/337 (33%), Positives = 177/337 (52%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAQTIADQDRFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ ++ + + Q L D DA+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERDAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAETRRWQVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ +V++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIE 342 >gi|227499754|ref|ZP_03929854.1| peptide chain release factor RF1 [Anaerococcus tetradius ATCC 35098] gi|227218140|gb|EEI83406.1| peptide chain release factor RF1 [Anaerococcus tetradius ATCC 35098] Length = 358 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 117/351 (33%), Positives = 184/351 (52%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ ++ + L K DP + ++ + RE L + +I+D Sbjct: 1 MFENIEHIKENYKDLEKKMIDPEVLADISRLTKITREYNSLKPIVEKYDQIKDAESTIEE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKL----EVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 EL E DD ++ + ++ + E + + DS D +E+ GAGG Sbjct: 61 NKELINEADDQDMIDMLKEEIKENEKLLDQYNEEMKILLIPKDPNDSRDVIVEIRPGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY +A+K +KTE +E+ GIK AT +++G AY K E GV Sbjct: 121 DEAGLFAGDLYRMYHMYADKEGYKTEDVEVTPQGVGGIKDATFMVRGEGAYSRFKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P VD+ + +D R D +R+SG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEVDELDV-HVDPNDIRTDVFRSSGNGGQSVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+VV Q E+SQ KNK +A +L A++YELE +KR + I ++ K+++G Sbjct: 240 SAVRLTHIPTGIVVSMQDEKSQIKNKEKAMKILLARIYELEEEKRNKE--IADNRKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P + D R N D L+G + + + + +A + Sbjct: 298 TGDRSERIRTYNF-PQGRITDHRINKTIYQLDDFLNGGIGEMIDSLIAEDQ 347 >gi|167032113|ref|YP_001667344.1| peptide chain release factor 2 [Pseudomonas putida GB-1] gi|166858601|gb|ABY97008.1| peptide chain release factor 2 [Pseudomonas putida GB-1] Length = 304 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 167/302 (55%), Positives = 220/302 (72%), Gaps = 1/302 (0%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 L + + ++ + L D LL++A+EE+D + + + L+ ++ + +F + SGE Sbjct: 2 LAQVVETLDKLSNGLGDCQDLLDMAVEENDENAVGDVVAELEELEENLAKLEFRRMFSGE 61 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F +E+ +GE AGIK AT+ Sbjct: 62 MDMNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVH 121 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 IKG A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ SD RID Sbjct: 122 IKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPSDLRID 181 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 TYR+SGAGGQHVNTTDSAVRITH+PT VV CQ ERSQH NK A MLRAKLYELE+QK Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQK 241 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R + E SK++IGWG QIRSYVL +KDLRT +E++ VLDGDLD +++A+L Sbjct: 242 RNAASQALEDSKSDIGWGHQIRSYVLDD-SRIKDLRTGVERSDCQKVLDGDLDQYLEASL 300 Query: 352 AI 353 Sbjct: 301 KQ 302 >gi|311107121|ref|YP_003979974.1| peptide chain release factor [Achromobacter xylosoxidans A8] gi|310761810|gb|ADP17259.1| peptide chain release factor 2 [Achromobacter xylosoxidans A8] Length = 300 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 156/298 (52%), Positives = 217/298 (72%), Gaps = 1/298 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + + + L D+ L ELA +DD + L+ + + ++E +F + S AD Sbjct: 2 VETLTALGSGLADSNELFELAASDDDDATLESIEQDADAFQEKLEALEFRRMFSNPADPL 61 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 + +L++ AGAGGTE+QDWA+MLLR Y ++AE++ FK E LE DG+ AG+KSAT+ I+G Sbjct: 62 NCFLDIQAGAGGTEAQDWASMLLRQYLKYAERKGFKAEVLEESDGDVAGLKSATIKIEGE 121 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A+G+L+ E GVHRLVR SP+DS+ RHTSF+S++VYP VD+S E+E++ +D R+DTYRA Sbjct: 122 YAFGYLRTETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRVDTYRA 181 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQH+N TDSAVR+THIPTG+VVQCQ +RSQH+N+A+A ML++KLYELE++ R Sbjct: 182 SGAGGQHINKTDSAVRLTHIPTGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMAE 241 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 E SKT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 242 QQKLEDSKTDVGWGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQ 298 >gi|242371609|ref|ZP_04817183.1| peptide chain release factor 1 [Staphylococcus epidermidis M23864:W1] gi|242350676|gb|EES42277.1| peptide chain release factor 1 [Staphylococcus epidermidis M23864:W1] Length = 358 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 115/351 (32%), Positives = 183/351 (52%), Gaps = 13/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D +R LN DP + + + + +E+ L + + + + + Sbjct: 1 MFDQLDIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRSYKSKKEELED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 + E+ E D ++ + +K E+ + + D D +E+ A AGG Sbjct: 61 IEEMLRETSDKEEVEMLKEESTALKNELPDMEEELKILLIPKDPNDEKDVIVEIRAAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L+RMY+++AE FKTE +E + + G K + + G AY LK E G Sbjct: 121 DEAAIFAGDLMRMYSKYAEANGFKTEIVEASESDHGGYKEISFSVSGSGAYSKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +EIEI D +IDTYR+SGAGGQHVNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTGVV E+SQ +N+ +A +L+A+LY+++LQ EE K+ +G Sbjct: 240 SAVRITHLPTGVVATSS-EKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYASQRKSAVG 296 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++G LD+ + A ++ Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGHLDEIIDALTLSEQ 346 >gi|237802457|ref|YP_002887651.1| peptide chain release factor 1 [Chlamydia trachomatis B/Jali20/OT] gi|231273691|emb|CAX10469.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis B/Jali20/OT] Length = 359 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 110/338 (32%), Positives = 173/338 (51%), Gaps = 11/338 (3%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI----QDRLCDNLILLELA 76 +RL + + DP+++ N E L +E L + + + + D L L Sbjct: 10 KRLEEVEKQISDPNIFSNPKEYSSLSKEHARLSEIKNAHESLVATKKILQDDKLALSTEK 69 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 E + + + ++ + + + D +E+ AG GG E+ + Sbjct: 70 DPEIVAMLEEGVLVGEEAVERLSKQLENLLIPPHPDDDLSVIMELRAGTGGDEAALFVGD 129 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 +RMY +A + ++ E L + + G K + I G + +L+ E G HR+ R+ Sbjct: 130 CVRMYHLYAASKGWQCEVLSTSESDLGGYKEYVMGISGASVKRFLQYEAGTHRVQRVPET 189 Query: 197 DSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 ++ R HTS ++ V P +D E+ I E D RIDT+R+SGAGGQHVN TDSAVRITHI Sbjct: 190 ETQGRVHTSAVTVAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSAVRITHI 249 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 P+GVVV CQ ERSQHKNKA+A +L+A++ + E+QKR + A+ S ++G G +I Sbjct: 250 PSGVVVTCQDERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRS--AQVGSGDRSERI 307 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 R+Y P V D R + + V++G+LD A Sbjct: 308 RTYNF-PQNRVTDHRIGLTLYNLDRVMEGELDMITTAL 344 >gi|46581318|ref|YP_012126.1| peptide chain release factor 1 [Desulfovibrio vulgaris str. Hildenborough] gi|120601501|ref|YP_965901.1| peptide chain release factor 1 [Desulfovibrio vulgaris DP4] gi|61214640|sp|Q727E1|RF1_DESVH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223554|sp|A1VAK8|RF1_DESVV RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|46450740|gb|AAS97386.1| peptide chain release factor 1 [Desulfovibrio vulgaris str. Hildenborough] gi|120561730|gb|ABM27474.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfovibrio vulgaris DP4] gi|311234981|gb|ADP87835.1| peptide chain release factor 1 [Desulfovibrio vulgaris RCH1] Length = 357 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 113/345 (32%), Positives = 174/345 (50%), Gaps = 11/345 (3%) Query: 13 LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCD 68 +F +N + L + ++ + + L + L + KE++ L D Sbjct: 1 MFAKLENLELKFEDLEQQLSSAEVFNDQDRYRKLTKAHADLKQVVDAFRRYKEMKQNLAD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 N LL + E +E + + + L D + LE+ AG GG Sbjct: 61 NKELLGDSDHEIRAMAHEEIKAIEAALPDIEQELKILLLPRDPMDDKNILLEIRAGTGGE 120 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMYTR+AE +K E L D + G K LI G Y LK E G H Sbjct: 121 EASLFAADLFRMYTRYAEIMGWKVEVLSASDSDTGGYKEIIALIAGDKVYSRLKYESGTH 180 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ ++ R HTS +++ V P + ++++I D RID YRASGAGGQHVN T+S Sbjct: 181 RVQRVPATEAQGRIHTSAATVAVMP-EAEEVDVDIRPDDLRIDVYRASGAGGQHVNKTES 239 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PTG+VV CQ E+SQHKNKA+A +L +++ + E ++ + I ++ + +G Sbjct: 240 AVRITHLPTGIVVACQDEKSQHKNKAKAMKVLISRVLQAEQER--AHSVIADARRALVGS 297 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G +IR+Y P + D R N+ S V++G+L + A Sbjct: 298 GDRSERIRTYNY-PQSRITDHRINLTLYSLDKVMEGELAPLVDAL 341 >gi|117926919|ref|YP_867536.1| peptide chain release factor 1 [Magnetococcus sp. MC-1] gi|226739111|sp|A0LDT7|RF1_MAGSM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|117610675|gb|ABK46130.1| bacterial peptide chain release factor 1 (bRF-1) [Magnetococcus sp. MC-1] Length = 361 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 112/348 (32%), Positives = 173/348 (49%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ R + L+ DP + +E L+ ++ + L E+ Sbjct: 7 LESLTSRHAELSAHLADPTTVSDSKRFAAYSKEFSDLEPVVAAWQAHLAILQQLAETDEM 66 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130 E D + +++ + + + L D + LE+ AG GG E+ Sbjct: 67 LAEAGDDAEMRQMAREERETLKNKLEQSQKHLHLMLLPKDPNDDKNVILEIRAGTGGEEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 + + L RMY R+AE + ++ E L + G K +++G AY LK E GVHR+ Sbjct: 127 ALFVSDLFRMYGRFAEIKGWRIEMLSSSATDLGGYKELIAMVQGKGAYMGLKYESGVHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 RI ++ R HTS ++ + P D +E+ I + D RID YR+SG GGQ VNTTDSAV Sbjct: 187 QRIPVTETGGRIHTSAVTVAILP-EADEVELHIEDKDLRIDVYRSSGPGGQSVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+VV CQ E+SQHKNKA+A +L+A+L L+ Q++ + E+ K ++G G Sbjct: 246 RITHLPTGLVVICQDEKSQHKNKAKAMKVLQARL--LDAQQQAADSQRAEARKGQVGSGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ VL G L + + A A + Sbjct: 304 RSERIRTYNF-PQSRVTDHRINLTLHKLDQVLQGGLAEVVDALTAHDQ 350 >gi|229020548|ref|ZP_04177293.1| Peptide chain release factor 1 [Bacillus cereus AH1273] gi|229026769|ref|ZP_04183101.1| Peptide chain release factor 1 [Bacillus cereus AH1272] gi|228734492|gb|EEL85154.1| Peptide chain release factor 1 [Bacillus cereus AH1272] gi|228740768|gb|EEL91021.1| Peptide chain release factor 1 [Bacillus cereus AH1273] Length = 358 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 118/352 (33%), Positives = 182/352 (51%), Gaps = 12/352 (3%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLC 67 G+ D R LN DP + + + + +E+ + + +E +D +L Sbjct: 3 GVLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQLR 62 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAG 126 D +LE L+ + +++E L+ + + + + + D + +EV AG Sbjct: 63 DAKAMLEDKLDAEMREMVKEEVSELEGQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAG 122 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L RMY+R+AE + +KTE +E E G K +I G A+ LK E G Sbjct: 123 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 182 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P + +EI I E D R+DT+ +SG GGQ VNTT Sbjct: 183 AHRVQRVPETESGGRIHTSTATVAVLP-EAEEVEINIHEKDVRVDTFASSGPGGQSVNTT 241 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K + Sbjct: 242 MSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAV 299 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R + +L G LDDF+ A + + Sbjct: 300 GTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350 >gi|156932658|ref|YP_001436574.1| hypothetical protein ESA_00441 [Cronobacter sakazakii ATCC BAA-894] gi|156530912|gb|ABU75738.1| hypothetical protein ESA_00441 [Cronobacter sakazakii ATCC BAA-894] Length = 293 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 169/290 (58%), Positives = 209/290 (72%), Gaps = 1/290 (0%) Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D LLELA+E DD E L +++ ++ +F + SGE DS D YL++ A Sbjct: 3 QGLDDVAGLLELAVEADDEETFNEAVAELDQLEAKLAQLEFRRMFSGEYDSADCYLDIQA 62 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTE+QDWA+MLLRMY RWAE R FKTE +E +GE AG+KSAT+ I G A+GWL+ Sbjct: 63 GSGGTEAQDWASMLLRMYLRWAEARGFKTEIIEESEGEVAGLKSATIKISGDYAFGWLRT 122 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS RRHTSFSS +VYP V+D I+IEI+ +D RID YRASGAGGQHV Sbjct: 123 ETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVEDDIDIEINPADLRIDVYRASGAGGQHV 182 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRITHIPTG V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K Sbjct: 183 NRTESAVRITHIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQALEDNK 242 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 ++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 243 SDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 291 >gi|319945454|ref|ZP_08019714.1| peptide chain release factor RF1 [Lautropia mirabilis ATCC 51599] gi|319741240|gb|EFV93667.1| peptide chain release factor RF1 [Lautropia mirabilis ATCC 51599] Length = 359 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 114/343 (33%), Positives = 174/343 (50%), Gaps = 7/343 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D RL LN + + +++ K L +E + + D ++ Sbjct: 9 LDRMQNRLEELNAQLASEDIGKDISLLKKLNQEHAETSEVLDTYALWKQAGADLEAARQM 68 Query: 76 ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 E D E + + + E ++ L D+ +A LE+ AG GG ES +A Sbjct: 69 REEPDMREFADEEIADAETRLQATQERIEYLLLPRDPDDARNAILEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE R ++TE L + E G + + + G YG L+ E G HR+ R+ Sbjct: 129 GDLLRMYLRYAEHRGWQTEILSASESELGGYREVIVQVSGQQVYGRLRYESGAHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V + + +IEIS D RID +RASGAGGQHVN T+SAVRITH Sbjct: 189 VTESQGRIHTSACTVAVMAEAEPTGDIEISPDDLRIDVFRASGAGGQHVNKTESAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+V +CQ +RSQH+N+ +A +L +L + ++RE A K+ +G G + Sbjct: 249 LPTGIVAECQDDRSQHRNRDKAMTVLLTRLRDA--RERERAAETSAHRKSLVGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P + D R N+ ++DGDLD+ A + + Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYKLQTIIDGDLDELTDALMKAR 348 >gi|229033962|ref|ZP_04188916.1| Peptide chain release factor 1 [Bacillus cereus AH1271] gi|228728388|gb|EEL79410.1| Peptide chain release factor 1 [Bacillus cereus AH1271] Length = 358 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 114/352 (32%), Positives = 175/352 (49%), Gaps = 12/352 (3%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 G+ D R LN DP + + + + +E+ + + +E +D Sbjct: 3 GVLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQLR 62 Query: 71 ILLELALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 + ++ D + + + + + K E + + D + +EV AG Sbjct: 63 DAKAMLEDKLDADMREMVKEEVSELEGQDKELSERLKILLVPKDPNDDKNVIVEVRGAAG 122 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L RMY+R+AE + +KTE +E E G K +I G A+ LK E G Sbjct: 123 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 182 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P + +EI I E D R+DT+ +SG GGQ VNTT Sbjct: 183 AHRVQRVPETESGGRIHTSTATVAVLP-EAEEVEISIHEKDVRVDTFASSGPGGQSVNTT 241 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K + Sbjct: 242 MSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAV 299 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R + +L G LDDF+ A + + Sbjct: 300 GTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350 >gi|314934187|ref|ZP_07841548.1| peptide chain release factor 1 [Staphylococcus caprae C87] gi|313653092|gb|EFS16853.1| peptide chain release factor 1 [Staphylococcus caprae C87] Length = 358 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 113/351 (32%), Positives = 183/351 (52%), Gaps = 13/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D +R LN DP + + + + +E+ L + + + + + Sbjct: 1 MFDQLDIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQADLQKTVEVYRSYKSKKEELED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 + E+ E D + + +K E+ + + D D +E+ A AGG Sbjct: 61 IEEMLKETSDKEEVDMLKEESASLKAELPEMEEELKILLIPKDPNDEKDVIVEIRAAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L+RMY+++AE FKTE +E + + G K + + G AY LK E G Sbjct: 121 DEAAIFAGDLMRMYSKYAEAYGFKTEIVEASESDHGGYKEISFSVSGSGAYSKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +EIEI D +IDTYR+SGAGGQHVNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTGV+ E+SQ +N+ +A +L+A+LY+++LQ EE K+ +G Sbjct: 240 SAVRITHLPTGVIATSS-EKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYASQRKSAVG 296 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G ++R+Y P V D R + +++G+LD+ + A ++ Sbjct: 297 TGDRSERVRTYNY-PQSRVTDHRIGLTLQKLGQIMEGNLDEIIDALTLSEQ 346 >gi|126209498|ref|YP_001054723.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae L20] gi|126098290|gb|ABN75118.1| Peptide chain release factor 1 (RF-1) [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 333 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 109/324 (33%), Positives = 175/324 (54%), Gaps = 7/324 (2%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 + + + +E L+ ++ + D L + D + E + Sbjct: 2 INDQDKFRAYSKEYSQLEEVVTTFNRWKKLNNDIEEAQILLDDPDMKDMAAEEIAENKAE 61 Query: 96 KLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 +E Q L D +A+LE+ AG GG E+ +A L RMY+R+ E ++++ E Sbjct: 62 IENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFAGDLYRMYSRYCESKRWRIEE 121 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 + ++ E+ G K + I G YG LK E G HR+ R+ +S R HTS ++ V P Sbjct: 122 MSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPE 181 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA Sbjct: 182 LPESEMPEINPTDLRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKA 241 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIE 331 +A +L +++ ++E +++ ++ + +G G + IR+Y P V D R N+ Sbjct: 242 KALAVLASRIVQVEQERQAAEQ--ADTRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLT 298 Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355 +V++G +D+ ++ + + Sbjct: 299 VYRLDEVMNGKIDELIQPIITEYQ 322 >gi|314935933|ref|ZP_07843283.1| peptide chain release factor 1 [Staphylococcus hominis subsp. hominis C80] gi|313655939|gb|EFS19681.1| peptide chain release factor 1 [Staphylococcus hominis subsp. hominis C80] Length = 358 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 116/351 (33%), Positives = 187/351 (53%), Gaps = 13/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D +R LN DP + + + + +E+ L + ++ + + + Sbjct: 1 MFDQLDIVEERYEQLNEMLSDPEIVNDPDKLRKYSKEQADLQKTVDVYRDYKSKREEVAE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 + E+ E DD ++ + +K E+ + F + D D +E+ A AGG Sbjct: 61 IDEMLTETDDKEEIEMLKEEASGLKGELPELEEQLKFLLIPKDPNDEKDVIVEIRAAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A LLRMYT++AE + FKTE +E + + G K + + G AY LK E G Sbjct: 121 DEAAIFAGDLLRMYTKYAESQNFKTEIVEAAESDHGGYKEISFSVSGSGAYSKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +EIE+ D +IDTYR+SGAGGQHVNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEVRNEDLKIDTYRSSGAGGQHVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTG++ E+SQ +N+ +A +L+A+LY+++LQ EE K+ +G Sbjct: 240 SAVRITHIPTGIIATSS-EKSQIQNREKALKVLKARLYDMKLQ--EEQQKYAAQRKSAVG 296 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G ++R+Y P V D R + +++G LD+ + A ++ Sbjct: 297 TGDRSERVRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIIDALTLSEQ 346 >gi|283785500|ref|YP_003365365.1| peptide chain release factor 1 [Citrobacter rodentium ICC168] gi|282948954|emb|CBG88557.1| peptide chain release factor 1 [Citrobacter rodentium ICC168] Length = 360 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 113/337 (33%), Positives = 179/337 (53%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + + + D + Sbjct: 9 LEALHERHEEVQALLGDAETIADQERFRALSREYAQLSDVSRCFTDWRQVQDDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ + ++ + + Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQDELRDAKEKSEQLEQQLQLLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +++GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAETRRWRVEIMSMNEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ +I+ +D RIDTYR+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTYRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQE--EASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ +V++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIE 342 >gi|27904871|ref|NP_777997.1| peptide chain release factor 2 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|27904269|gb|AAO27102.1| peptide chain release factor 2 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 337 Score = 223 bits (569), Expect = 3e-56, Method: Composition-based stats. Identities = 150/334 (44%), Positives = 219/334 (65%), Gaps = 1/334 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 RL +N + + P W++ K + +E+ L + ++ I +I + + + + +L L Sbjct: 2 KKNRLLEINMELKLPETWKHPSLIKKINKEKNQLISVVTQITKIDNDVQELIDILNLENS 61 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 + SIL + I+ + + S+ G+ D Y+++ +G+GG E+QDWA+MLL Sbjct: 62 NNINSILDNVLYEFKNIEKSIHELEKCSMFLGKYDYLSCYVDIQSGSGGVEAQDWASMLL 121 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RWAE +KFK + +E GE GIKSAT+ + G A+GW + E G+HRLVR SP+++ Sbjct: 122 RMYVRWAESKKFKIDIIEQTYGEVVGIKSATIEVLGKYAFGWFRTETGIHRLVRKSPFNA 181 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 + RRHTSFSS++VYP++DD+I ++I+ D +ID YRASGAGGQHVN T+SAVRI H+PTG Sbjct: 182 HHRRHTSFSSVYVYPILDDAINVDINTRDLKIDVYRASGAGGQHVNKTESAVRIRHLPTG 241 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 +VVQCQ +RSQHKNK QA L+AKLYE + +++ I E++K IGWG QIRSY L Sbjct: 242 IVVQCQNDRSQHKNKDQAMKQLKAKLYEQLINEKKCQQKILENNKLNIGWGHQIRSYTLD 301 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +KDLRT +E + VLDG LD F++ +L Sbjct: 302 -NSRIKDLRTGVESKNIQSVLDGGLDLFVECSLR 334 >gi|302342174|ref|YP_003806703.1| peptide chain release factor 1 [Desulfarculus baarsii DSM 2075] gi|301638787|gb|ADK84109.1| peptide chain release factor 1 [Desulfarculus baarsii DSM 2075] Length = 361 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 118/346 (34%), Positives = 176/346 (50%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLIL 72 + R + + + DP++ N +E L + + + L N +L Sbjct: 11 LEEVEARFNAVERELADPNIVANQENFMKRSKEHAELSQLVECFRSYNKYEQELEQNRLL 70 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + EE E + + + L D + LE+ AG GG E+ Sbjct: 71 MADDDEELAALAGVEVEQAETALVDLEQRMRLLLLPQDPRDEKNVVLEIRAGTGGDEAAL 130 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A LLRMY R+AE +++KTE L H G K LI G AY LK E G HR+ R Sbjct: 131 FAAELLRMYLRYAELKRWKTEILSQHPTNAGGFKEVIALITGRGAYSQLKYESGAHRVQR 190 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D +E++I + RID +R+SG GGQHVNTTDSAVRI Sbjct: 191 VPATESQGRVHTSAVTVAVLP-EADEVEVDIKPEELRIDYFRSSGPGGQHVNTTDSAVRI 249 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV CQ E+SQHKNKA+A +L A+L LE ++E+ A + + ++++G G Sbjct: 250 THLPTGLVVSCQDEKSQHKNKAKALKVLAARL--LEKMEQEQQAALAANRRSQVGSGDRS 307 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +VL G+L+ + +A + Sbjct: 308 ERIRTYNF-PQGRVTDHRIGLTIYKLEEVLVGELELIIPHLVAYFQ 352 >gi|146328937|ref|YP_001209831.1| peptide chain release factor 2 [Dichelobacter nodosus VCS1703A] gi|146232407|gb|ABQ13385.1| peptide chain release factor 2 [Dichelobacter nodosus VCS1703A] Length = 305 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 163/301 (54%), Positives = 212/301 (70%), Gaps = 1/301 (0%) Query: 53 DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112 + + I L D L+ LA +E+D ++Q +++R++ VE +F + SGE Sbjct: 2 QTVVLGLDNIHQGLNDARELMALAEDENDEELVQSARLDIERLQKSVEILEFRRMFSGEL 61 Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D+N+A+L++ +G+GGTE+QDWA ML RMY RW E + F TE LE G+ AGIKSAT+ Sbjct: 62 DANNAFLDIQSGSGGTEAQDWAEMLERMYLRWGEAKGFTTELLEETPGDVAGIKSATIRF 121 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G AYGWLK E GVHRLVR SP+D+N+RRHTSF++++V P +DD+IEI+I+ +D RID Sbjct: 122 TGEYAYGWLKTEIGVHRLVRKSPFDANNRRHTSFAAVFVSPEIDDAIEIDINPADLRIDV 181 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQHVN T+SAVRITH+PTG VVQ Q RSQH+NK LRAKLY+LEL KR Sbjct: 182 YRASGAGGQHVNRTESAVRITHLPTGTVVQSQDSRSQHQNKQTCMRHLRAKLYQLELHKR 241 Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E A E SK++IGWG QIRSYVL Q +KDLRT E ++ VLDGDLD F++ +L Sbjct: 242 SESAQALEDSKSDIGWGNQIRSYVLD-QQRIKDLRTGYETSNTQAVLDGDLDPFIQESLK 300 Query: 353 I 353 Sbjct: 301 Q 301 >gi|154687816|ref|YP_001422977.1| peptide chain release factor 1 [Bacillus amyloliquefaciens FZB42] gi|154353667|gb|ABS75746.1| PrfA [Bacillus amyloliquefaciens FZB42] Length = 359 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 113/354 (31%), Positives = 186/354 (52%), Gaps = 12/354 (3%) Query: 10 LGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65 + + D + QR LN DP + + + + +E+ + + ++ +D + Sbjct: 1 MKTVLDRLQSIEQRYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVEVYRQYRDASEQ 60 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAG 124 L D +LE L+ D +++E LQ + + + + D + +E+ Sbjct: 61 LADAKAMLEEKLDADMREMVKEEISELQGETETLSERLKVLLIPKDPNDDKNVIMEIRGA 120 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG E+ +A L RMY+R+AE + +KTE +E + G K +I G AY LK E Sbjct: 121 AGGEEAALFAGNLYRMYSRYAEIQGWKTEVMEANVTGTGGYKEIIFMITGKGAYSKLKYE 180 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G HR+ R+ +S R HTS +++ P + +E++I E D R+DT+ +SG GGQ VN Sbjct: 181 NGAHRVQRVPETESGGRIHTSTATVACLP-EAEEVEVDIHEKDIRVDTFASSGPGGQSVN 239 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TT SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ ++E A ++ K+ Sbjct: 240 TTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKF--QQEAQAEYDQTRKS 297 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +G G +IR+Y P V D R + +L+G LD+ ++A + + Sbjct: 298 AVGSGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQ 350 >gi|269837927|ref|YP_003320155.1| peptide chain release factor 1 [Sphaerobacter thermophilus DSM 20745] gi|269787190|gb|ACZ39333.1| peptide chain release factor 1 [Sphaerobacter thermophilus DSM 20745] Length = 361 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 111/346 (32%), Positives = 183/346 (52%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLIL 72 D R L+ DP + N + RER L+ ++ K + + + L Sbjct: 8 LDQLEARFEELDRLLADPEVVTNPEKLAEYGRERADLEEVVTTYRTRKRVDAEIAEAESL 67 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L + + +E + + + + D + +E+ AG GG E+ Sbjct: 68 LRSGDPDLEELAEEELKRLREERERLDNEIRMLLVPKDPNDEKNVIVEIRAGTGGEEAAL 127 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AEKR +K + + ++ G K ++G AY LK E GVHR+ R Sbjct: 128 FAADLFRMYSQYAEKRGWKIDVMSANETGIGGFKEIIFEVRGRGAYSELKYESGVHRVQR 187 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS +++ V P + ++I+I+E D RID +R++G GGQ VNTTDSAVRI Sbjct: 188 VPVTESGGRIHTSTATVAVLP-EAEEVDIQINEEDLRIDVFRSTGHGGQSVNTTDSAVRI 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311 TH+PTG+VV CQ E+SQ KN+A+A +LRA+LY+LE ++ E + ++++G G + Sbjct: 247 THLPTGLVVTCQDEKSQIKNRAKAMAVLRARLYDLEQRRLHEERSGM--RRSQVGTGERA 304 Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R + + ++L+G++D F++ A + Sbjct: 305 EKIRTYNF-PQDRVTDHRLKLSLGNLPEILNGEIDTFIRELRAADQ 349 >gi|16804581|ref|NP_466066.1| peptide chain release factor 1 [Listeria monocytogenes EGD-e] gi|224500713|ref|ZP_03669062.1| peptide chain release factor 1 [Listeria monocytogenes Finland 1988] gi|224503217|ref|ZP_03671524.1| peptide chain release factor 1 [Listeria monocytogenes FSL R2-561] gi|255029752|ref|ZP_05301703.1| peptide chain release factor 1 [Listeria monocytogenes LO28] gi|20139329|sp|Q8Y4A8|RF1_LISMO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|16412031|emb|CAD00621.1| prf1 [Listeria monocytogenes EGD-e] Length = 358 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 103/347 (29%), Positives = 172/347 (49%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R LN DP + + + L +E+ + + +E ++ EL Sbjct: 5 LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQINETKEL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E+ D + + + ++ E + + D + LE+ AGG E+ Sbjct: 65 LGEKLDDEMREMAKEEFAELQKEKTDLEERLKLLLVPKDPNDDKNVILEIRGAAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+++AE R +K E ++ + G K ++ G +A+ +K E G HR+ Sbjct: 125 LFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ + P + +EIE+ + D R DT+ ++GAGGQ VNTT SAVR Sbjct: 185 RVPETESGGRIHTSTATVAILP-EAEEVEIELHDKDIRTDTFASTGAGGQSVNTTMSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTG+VV Q ERSQ KNK +A +LRA++Y+ +RE + K+ +G G Sbjct: 244 LTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKF--EREAREEYDANRKSAVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +++G LD+ + A + + Sbjct: 302 SERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQ 347 >gi|308175429|ref|YP_003922134.1| peptide chain release factor 1 [Bacillus amyloliquefaciens DSM 7] gi|307608293|emb|CBI44664.1| peptide chain release factor 1 [Bacillus amyloliquefaciens DSM 7] Length = 356 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 114/351 (32%), Positives = 185/351 (52%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68 + D + QR LN DP + + + + +E+ + + ++ +D +L D Sbjct: 1 MLDRLQSIEQRYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVEVYRQYRDASEQLTD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127 +LE L+ D +++E LQR + + + + D + +E+ AGG Sbjct: 61 AKAMLEDKLDADMREMVKEEISELQRETETLSERLKVLLIPKDPNDDKNVIMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE + +KTE +E G K +I G AY LK E G Sbjct: 121 EEAALFAGNLYRMYSRYAEVQGWKTEVMEASVTGTGGYKEIIFMITGKGAYSKLKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ P + +E++I E D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLP-EAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ ++E A ++ K+ +G Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKF--QQEAQAEYDQNRKSAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L+G LD+ ++A + + Sbjct: 298 SGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQ 347 >gi|297588165|ref|ZP_06946809.1| peptide chain release factor RF2 [Finegoldia magna ATCC 53516] gi|297574854|gb|EFH93574.1| peptide chain release factor RF2 [Finegoldia magna ATCC 53516] Length = 329 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 155/326 (47%), Positives = 219/326 (67%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 +T W + +A+ + E + + EI++++ + ++LE++ E++ + Sbjct: 2 QQETLKQGFWDDSDKAQAIFDELNSIKADVENYDEIEEKIEEVKMMLEISKEDNTEEYEK 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E S L+ ++ +V+ + ++LL GE D N+A + +HAGAGGTE+QDWA MLLRMYTRW Sbjct: 62 EISKTLKSLEEKVDEFKIKTLLVGEYDKNNAIMSIHAGAGGTEAQDWAEMLLRMYTRWIA 121 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 +K+ + + + E GIKS +L+++G NAYG+LK E+GVHRLVRISP+D RRHTSF Sbjct: 122 DKKYSYKITDYNQDTEGGIKSVSLIVQGINAYGFLKSEKGVHRLVRISPFDQQKRRHTSF 181 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S+ V+P + DS I+I + D ++DTYRASGAGGQHVN TDSAVRITHIPTGV VQCQ E Sbjct: 182 ASVDVFPEIKDSHNIQIDDKDLKVDTYRASGAGGQHVNMTDSAVRITHIPTGVTVQCQTE 241 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQ N+ A +ML AKL ++ +++ E + +I WG QIRSYV QPY +VKD Sbjct: 242 RSQIANRKYAMDMLIAKLIMIKEEEKREKIEDIQGKYNQIAWGSQIRSYVFQPYTLVKDH 301 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLA 352 RTN E + DVLDGDLD F+ A L+ Sbjct: 302 RTNFESSQVQDVLDGDLDKFINAYLS 327 >gi|166154244|ref|YP_001654362.1| peptide chain release factor 1 [Chlamydia trachomatis 434/Bu] gi|166155119|ref|YP_001653374.1| peptide chain release factor 1 [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335493|ref|ZP_07223737.1| peptide chain release factor 1 [Chlamydia trachomatis L2tet1] gi|238687434|sp|B0B9D0|RF1_CHLT2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238687452|sp|B0BB09|RF1_CHLTB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|165930232|emb|CAP03717.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis 434/Bu] gi|165931107|emb|CAP06671.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 359 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 110/338 (32%), Positives = 173/338 (51%), Gaps = 11/338 (3%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI----QDRLCDNLILLELA 76 +RL + + DP+++ N E L +E L + + + + D L L Sbjct: 10 KRLEEVEKQISDPNIFSNPKEYSSLSKEHARLSEIKNAHESLVATKKILQDDKLALSTEK 69 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 E + + + ++ + + + D +E+ AG GG E+ + Sbjct: 70 DPEIVAMLEEGVLVGEEAVERLSKQLENLLIPPDPDDDLSVIMELRAGTGGDEAALFVGD 129 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 +RMY +A + ++ E L + + G K + I G + +L+ E G HR+ R+ Sbjct: 130 CVRMYHLYAASKGWQCEVLSASESDLGGYKEYVMGISGASVKRFLQYEAGTHRVQRVPET 189 Query: 197 DSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 ++ R HTS ++ V P +D E+ I E D RIDT+R+SGAGGQHVN TDSAVRITHI Sbjct: 190 ETQGRVHTSAVTVAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSAVRITHI 249 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 P+GVVV CQ ERSQHKNKA+A +L+A++ + E+QKR + A+ S ++G G +I Sbjct: 250 PSGVVVTCQDERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRS--AQVGSGDRSERI 307 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 R+Y P V D R + + V++G+LD A Sbjct: 308 RTYNF-PQNRVTDHRIGLTLYNLDRVMEGELDMITTAL 344 >gi|223983553|ref|ZP_03633736.1| hypothetical protein HOLDEFILI_01017 [Holdemania filiformis DSM 12042] gi|223964481|gb|EEF68810.1| hypothetical protein HOLDEFILI_01017 [Holdemania filiformis DSM 12042] Length = 359 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 103/346 (29%), Positives = 173/346 (50%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---LCDNLIL 72 + +R + +N + P + + L +E+ L ++ +E++ + + Sbjct: 8 LQSIEERYNEINEEMMSPEIVSDPKRLAKLGKEQASLKQSVEAYEELKSLNSHIEQAEEM 67 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + E E + L + + + + + D +D +E+ AGG E Sbjct: 68 AKEHDPELKEMAQMELEELLPKKEALIAKIEVLLIPKDPNDDHDCIVEIRGAAGGDEGNI 127 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY R+AE + +K + LE+ + E G + L+KG Y LK E G HR+ R Sbjct: 128 FAGDLYRMYVRYAETQGWKIQVLEMSESEAGGFSMISFLVKGGEVYRQLKFESGAHRVQR 187 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ V P +++ I +D +T+RASGAGGQH+N TDSAVRI Sbjct: 188 VPKTETQGRIHTSTATVLVLPDAEEADIE-IDPADLTFETHRASGAGGQHINKTDSAVRI 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 H+PTG+ V CQ+ RSQH+N+ A ++RA++Y E R++ G + +IG G Sbjct: 247 VHVPTGITVNCQEGRSQHENRETALRLIRARVY--EELTRQKEEEEGAVRRAKIGTGDRS 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R +++G LDD + A LA ++ Sbjct: 305 EKIRTYNY-PQNRVTDHRIGFTINQLDRIMEGKLDDVIAALLAEEQ 349 >gi|21231300|ref|NP_637217.1| peptide chain release factor 2 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768648|ref|YP_243410.1| peptide chain release factor 2 [Xanthomonas campestris pv. campestris str. 8004] gi|188991534|ref|YP_001903544.1| peptide chain release factor 2 [Xanthomonas campestris pv. campestris str. B100] gi|21112954|gb|AAM41141.1| putative peptide release factor 2 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573980|gb|AAY49390.1| putative peptide release factor 2 [Xanthomonas campestris pv. campestris str. 8004] gi|167733294|emb|CAP51493.1| peptide chain release factor 2 [Xanthomonas campestris pv. campestris] Length = 313 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 164/302 (54%), Positives = 216/302 (71%), Gaps = 1/302 (0%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 L+ + I ++ L D LL+LA E D +L + + VE +F+ + SG+ Sbjct: 2 LEKTVIGIADVLAGLTDAGELLDLAESEQDEDTAVAVIADLDKYQAHVEKLEFQRMFSGQ 61 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 D +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE +E+ GE AGIKSAT+ Sbjct: 62 MDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTELMEVSGGEVAGIKSATIR 121 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I+G AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P VDD+IEI+I+ +D R D Sbjct: 122 IEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDNIEIDINPADLRTD 181 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 YR+SGAGGQHVN T+SAVRITHIPT VV CQ RSQH+N+ A ML AKLYELE+QK Sbjct: 182 VYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRDNAMKMLAAKLYELEVQK 241 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R + E++K++IGWG QIR+YVL +KDLRT IE++ VLDGDLD+F++A+L Sbjct: 242 RNVERDALEATKSDIGWGSQIRNYVLD-QSRIKDLRTGIERSDTQKVLDGDLDEFVEASL 300 Query: 352 AI 353 Sbjct: 301 KA 302 >gi|299135937|ref|ZP_07029121.1| peptide chain release factor 1 [Acidobacterium sp. MP5ACTX8] gi|298602061|gb|EFI58215.1| peptide chain release factor 1 [Acidobacterium sp. MP5ACTX8] Length = 356 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 105/347 (30%), Positives = 177/347 (51%), Gaps = 11/347 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D +R L + DP L + + + + ++ + L+ + +E + Sbjct: 1 MFDRLDQIEERYEDLGRQLGDPTLVSDQKKFQTVAKQHRDLEPTVDKFREYRKLRDGVAE 60 Query: 72 LLELALEED-DCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGT 128 + E D + + E KL ++ + L D + +E+ AG GG Sbjct: 61 AKAMLTESDAEMRAMAEDELLTLEPKLATTEEELKVLLLPKDPNDDKNVIVELRAGTGGD 120 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ + + RMY R+AE+ K+K E L D + G+K T + +G Y +K E GVH Sbjct: 121 EASLFVAEVFRMYLRFAEQHKWKVEVLSQTDSDVGGLKDVTAIFEGDKVYSQMKYESGVH 180 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ ++ R HTS ++ V P + +++++ D RIDT+ +SG GGQ VNTT S Sbjct: 181 RVQRVPATETQGRVHTSAITVAVLP-EAEEVDVKVEAKDLRIDTFCSSGPGGQSVNTTYS 239 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 A+RITH+PT VV CQ E+SQ KN+ +A +LRA+LYE+E ++ ++ + K ++G Sbjct: 240 AIRITHLPTNTVVSCQDEKSQIKNREKAMRVLRARLYEVEAERVHQLQ--AKERKQQVGT 297 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G +IR+Y P + D R + + V++G L + A +A Sbjct: 298 GDRSEKIRTYNF-PQNRLTDHRIGLTNHQLAMVMEGLLQPTVDALIA 343 >gi|206895451|ref|YP_002247173.1| peptide chain release factor 1 [Coprothermobacter proteolyticus DSM 5265] gi|206738068|gb|ACI17146.1| peptide chain release factor 1 [Coprothermobacter proteolyticus DSM 5265] Length = 360 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 117/345 (33%), Positives = 180/345 (52%), Gaps = 11/345 (3%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 +R L E+P + + + LMRE+ LD I I + + + D + Sbjct: 9 AMEERYESLVRDLENPEIASDPEQLMKLMREKSQLDPIIEKIADYRKLIRDIESAKAILE 68 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLL----SGEADSNDAYLEVHAGAGGTESQDW 133 E + + + + L+ ++ + K+ E L D +E+ AG GG E+ + Sbjct: 69 EPGEDELKELAEEELRNLEDILPQKEKELKLLLVEPDPMDEKPVIVEIRAGVGGEEAALF 128 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A L RMYTR+AE++ +K E ++ + + G K ++G Y LK E GVHR+ R+ Sbjct: 129 AGDLFRMYTRYAERKGWKVELVDSNPTDLGGFKEVVFSVEGDRVYSRLKYESGVHRVQRV 188 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +S+ R HTS +++ V P D +EIEI+E D IDT+RA G GGQ+V ++AVRI Sbjct: 189 PETESSGRIHTSTATVAVLP-EVDEVEIEINEEDLEIDTFRAGGHGGQNVQKNETAVRIK 247 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WGR 310 H PTG+VV CQ ERSQ +NK +A +LRAKLYE +L++R+ ++ ++ IG G Sbjct: 248 HKPTGIVVTCQDERSQLQNKMKALKVLRAKLYERQLEERQ--KSMSSFRRSLIGSAERGE 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y V D R N LDGDLD+ + A + Sbjct: 306 KIRTYNFM-QNRVTDHRINYTIYYLDRFLDGDLDEMIDALETADR 349 >gi|323463876|gb|ADX76029.1| peptide chain release factor 1 [Staphylococcus pseudintermedius ED99] Length = 358 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 114/351 (32%), Positives = 180/351 (51%), Gaps = 13/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D +R LN DP + + + +E+ L + ++ + D Sbjct: 1 MFDQLDIVEERYEQLNELLSDPEVVSDSNLLRKYSKEQSELQKTVEVYRQYKQVKEDAEE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGG 127 + + E D+ ++ + +K EV + + D D +E+ AGG Sbjct: 61 IELMLAETDEADEVEMLKEEASALKAEVPELEEQLKLLLIPKDPNDEKDVIVEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+++AE +FK E +E + + G K + + G AY LK E G Sbjct: 121 DEAAIFAGDLFRMYSKFAESHRFKLEIVEATESDHGGYKEISFSVSGDGAYSKLKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +EIEI D +IDTYR+SGAGGQHVNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTGV+ E+SQ +N+ +A +L+A+LY+++LQ EE K+ +G Sbjct: 240 SAVRITHIPTGVIATSS-EKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYAAQRKSAVG 296 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++G LD+ + A ++ Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIVDALTMHEQ 346 >gi|46908715|ref|YP_015104.1| peptide chain release factor 1 [Listeria monocytogenes serotype 4b str. F2365] gi|47093870|ref|ZP_00231612.1| peptide chain release factor 1 [Listeria monocytogenes str. 4b H7858] gi|217963353|ref|YP_002349031.1| peptide chain release factor 1 [Listeria monocytogenes HCC23] gi|226225091|ref|YP_002759198.1| peptide chain release factor 1 [Listeria monocytogenes Clip81459] gi|254825334|ref|ZP_05230335.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-194] gi|254828119|ref|ZP_05232806.1| peptide chain release factor 1 [Listeria monocytogenes FSL N3-165] gi|254831034|ref|ZP_05235689.1| peptide chain release factor 1 [Listeria monocytogenes 10403S] gi|254853928|ref|ZP_05243276.1| peptide chain release factor 1 [Listeria monocytogenes FSL R2-503] gi|254900318|ref|ZP_05260242.1| peptide chain release factor 1 [Listeria monocytogenes J0161] gi|254913443|ref|ZP_05263455.1| peptide chain release factor 1 [Listeria monocytogenes J2818] gi|254932215|ref|ZP_05265574.1| peptide chain release factor 1 [Listeria monocytogenes HPB2262] gi|254937824|ref|ZP_05269521.1| peptide chain release factor 1 [Listeria monocytogenes F6900] gi|254993429|ref|ZP_05275619.1| peptide chain release factor 1 [Listeria monocytogenes FSL J2-064] gi|255026493|ref|ZP_05298479.1| peptide chain release factor 1 [Listeria monocytogenes FSL J2-003] gi|255519761|ref|ZP_05386998.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-175] gi|284802981|ref|YP_003414846.1| peptide chain release factor 1 [Listeria monocytogenes 08-5578] gi|284996122|ref|YP_003417890.1| peptide chain release factor 1 [Listeria monocytogenes 08-5923] gi|290892706|ref|ZP_06555698.1| peptide chain release factor 1 [Listeria monocytogenes FSL J2-071] gi|300764957|ref|ZP_07074945.1| peptide chain release factor 1 [Listeria monocytogenes FSL N1-017] gi|61214637|sp|Q71WN5|RF1_LISMF RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790886|sp|B8DBG6|RF1_LISMH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|259585225|sp|C1KYW0|RF1_LISMC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|46881987|gb|AAT05281.1| peptide chain release factor 1 [Listeria monocytogenes serotype 4b str. F2365] gi|47017744|gb|EAL08535.1| peptide chain release factor 1 [Listeria monocytogenes str. 4b H7858] gi|217332623|gb|ACK38417.1| peptide chain release factor 1 [Listeria monocytogenes HCC23] gi|225877553|emb|CAS06267.1| Putative peptide chain release factor 1 [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258600504|gb|EEW13829.1| peptide chain release factor 1 [Listeria monocytogenes FSL N3-165] gi|258607316|gb|EEW19924.1| peptide chain release factor 1 [Listeria monocytogenes FSL R2-503] gi|258610428|gb|EEW23036.1| peptide chain release factor 1 [Listeria monocytogenes F6900] gi|284058543|gb|ADB69484.1| peptide chain release factor 1 [Listeria monocytogenes 08-5578] gi|284061589|gb|ADB72528.1| peptide chain release factor 1 [Listeria monocytogenes 08-5923] gi|290557766|gb|EFD91288.1| peptide chain release factor 1 [Listeria monocytogenes FSL J2-071] gi|293583770|gb|EFF95802.1| peptide chain release factor 1 [Listeria monocytogenes HPB2262] gi|293591450|gb|EFF99784.1| peptide chain release factor 1 [Listeria monocytogenes J2818] gi|293594577|gb|EFG02338.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-194] gi|300514257|gb|EFK41316.1| peptide chain release factor 1 [Listeria monocytogenes FSL N1-017] gi|307572070|emb|CAR85249.1| peptide chain release factor 1 [Listeria monocytogenes L99] gi|332312973|gb|EGJ26068.1| Peptide chain release factor 1 [Listeria monocytogenes str. Scott A] Length = 358 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 103/347 (29%), Positives = 172/347 (49%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R LN DP + + + L +E+ + + +E ++ EL Sbjct: 5 LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQINETKEL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E+ D + + + ++ E + + D + LE+ AGG E+ Sbjct: 65 LGEKLDDEMREMAKEEFAELQKEKADLEERLKLLLVPKDPNDDKNVILEIRGAAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+++AE R +K E ++ + G K ++ G +A+ +K E G HR+ Sbjct: 125 LFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ + P + +EIE+ + D R DT+ ++GAGGQ VNTT SAVR Sbjct: 185 RVPETESGGRIHTSTATVAILP-EAEEVEIELHDKDIRTDTFASTGAGGQSVNTTMSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTG+VV Q ERSQ KNK +A +LRA++Y+ +RE + K+ +G G Sbjct: 244 LTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKF--EREAREEYDANRKSAVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +++G LD+ + A + + Sbjct: 302 SERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQ 347 >gi|283478591|emb|CAY74507.1| Peptide chain release factor 1 (RF-1) [Erwinia pyrifoliae DSM 12163] Length = 363 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 111/337 (32%), Positives = 174/337 (51%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + ++ Q D + Sbjct: 12 LEALQERHEEVEALLGDAGVIADQERFRALSREYAQLTDVSRCFRQWQQCQEDMATAEMM 71 Query: 76 ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E + Q L D + YLEV AG GG E+ +A Sbjct: 72 LGDAEMREMAQEELQAARAASDELQQQLQVLLLPKDPDDERNCYLEVRAGTGGDEAAIFA 131 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R++K E + ++GE G K + G AYG LK E G HR+ R+ Sbjct: 132 GDLFRMYSRYAEYRRWKVEVMSANEGEHGGYKEVIAKVIGEGAYGRLKFESGGHRVQRVP 191 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ +I+ SD +IDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 192 ETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDTFRSSGAGGQHVNTTDSAIRITH 251 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A +L +++ E+ +R++ + + +G G + Sbjct: 252 LPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARRQQE--ESSTRRNLLGSGDRSDR 309 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ + ++G LD ++ Sbjct: 310 NRTYNF-PQGRVTDHRINLTIYRLDEAMEGKLDALIE 345 >gi|260779385|ref|ZP_05888277.1| peptide chain release factor 1 [Vibrio coralliilyticus ATCC BAA-450] gi|260605549|gb|EEX31844.1| peptide chain release factor 1 [Vibrio coralliilyticus ATCC BAA-450] Length = 362 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 113/346 (32%), Positives = 184/346 (53%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R + DP + + + + L +E L+ + Q D + E+ Sbjct: 9 LETLVERYEEVQHLLGDPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQEDLVAAEEM 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 A E+D + + I+ + Q L D + +LE+ AGAGG E+ Sbjct: 69 AKEDDAEMREMAQEEIKEAQETIERLNDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AEK+ ++ E + ++ E G K + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSKFAEKKGWRVEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ + + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RI Sbjct: 189 VPATESQGRVHTSACTVAIMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311 TH+PTG VV+CQ ERSQHKNKA+A ++L A++ ++ ++ + A ++ + +G G + Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMSVLAARI--IQAEEAKRAAEESDTRRNLLGSGDRS 306 Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ ++V++GDL + + + Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTIYRLNEVMEGDLASLVDPVIQEHQ 351 >gi|322383119|ref|ZP_08056946.1| peptide chain release factor 1-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152781|gb|EFX45407.1| peptide chain release factor 1-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 356 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 117/351 (33%), Positives = 180/351 (51%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D R L+ DP + + + + +E+ L A E + L Sbjct: 1 MLDRLQALADRYEKLSELLCDPDVTSDTKKLREYSKEQSGLQEAYDTYMEYKQVLGQLEA 60 Query: 72 LLELALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + E+ D + + ++ R + E + L D+ + +EV AGG Sbjct: 61 AKAMQKEKLDDEMSELVKMEIEELSGRKEELEERLKILMLPKDPNDNKNVIVEVRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE + +KTE L+ + + G K T +IKG AY LK E G Sbjct: 121 DEAALFAADLYRMYSRYAESQGWKTEVLDANLNDLGGFKEITFMIKGNGAYSKLKYESGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +S R HTS S++ V P + I+IEI +SD R+DT+ +SGAGGQ VNTT Sbjct: 181 HRVQRIPVTESGGRIHTSTSTVAVMP-EMEDIDIEIKDSDIRVDTFCSSGAGGQSVNTTK 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+V CQ +SQ+ NKA+A +LRA++Y+ ++EE A K+++G Sbjct: 240 SAVRVTHVPTGIVATCQDGKSQNDNKAKALQVLRARIYD--QVRQEEEAKYAGERKSKVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L GDL++ + A + Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTLHKLDSILGGDLEEIITALTMAAQ 347 >gi|59711375|ref|YP_204151.1| peptide chain release factor 1 [Vibrio fischeri ES114] gi|197334513|ref|YP_002155529.1| peptide chain release factor 1 [Vibrio fischeri MJ11] gi|75431754|sp|Q5E6T3|RF1_VIBF1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238690273|sp|B5FBX0|RF1_VIBFM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|59479476|gb|AAW85263.1| peptide chain release factor RF-1 [Vibrio fischeri ES114] gi|197316003|gb|ACH65450.1| peptide chain release factor 1 [Vibrio fischeri MJ11] Length = 362 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 114/339 (33%), Positives = 181/339 (53%), Gaps = 9/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R + DP + + + + L RE L+ + + D + E+ Sbjct: 9 LETLVERYEEVQHLLGDPDVIGDQNKFRALSREYSQLEEVTQCFQAYEQAQEDLVAAQEM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 A E+D+ + + Q L D + +LE+ AGAGG E+ Sbjct: 69 AQEDDEEMREMAQEEIKDAKEAIERLTDELQVLLLPKDPNDERNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AEK+ ++ E + ++ E G K + G AYG LK E G HR+ R Sbjct: 129 FAGNLFRMYSRFAEKKGWRVEVMSSNEAEHGGYKEMIAKVSGEGAYGVLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RI Sbjct: 189 VPETESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG VV+CQ ERSQHKNKA+A ++L A++ ++ ++ A + ++ + +G G Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMSVLAARI--IQAEEARRAAAVSDTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +IR+Y P V D R N+ ++V++GDL ++ Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTVYRLNEVMEGDLGCLIE 344 >gi|88706910|ref|ZP_01104609.1| peptide chain release factor 2 [Congregibacter litoralis KT71] gi|88698832|gb|EAQ95952.1| peptide chain release factor 2 [Congregibacter litoralis KT71] Length = 299 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 161/297 (54%), Positives = 215/297 (72%), Gaps = 1/297 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 +S I + D L L+E+A EEDD + + E +Q + +E +F + +GE D N Sbjct: 1 MSSIDALDTGASDTLDLIEMAAEEDDEAAVAELEQEIQGLLKVLEKLEFRRMFNGEMDPN 60 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 +A+L++ +G+GGTE+QDWA +LLRMY RW E + F TE +E G+ AGIKSAT+ G Sbjct: 61 NAFLDIQSGSGGTEAQDWAEILLRMYLRWGEAKGFSTELIEASGGDVAGIKSATIKFTGE 120 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A+GWL+ E GVHRLVR SP+DS +RRHTSF+S++V P +DD+IEIEI+ +D R+DTYRA Sbjct: 121 YAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVAPEIDDNIEIEINPADLRVDTYRA 180 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVN TDSAVR+TH P+G+VVQCQ ERSQH+N+ A +LR KLYE+E+ KR E Sbjct: 181 SGAGGQHVNKTDSAVRLTHNPSGIVVQCQTERSQHQNRDNAMKLLRGKLYEMEILKRNEE 240 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 I E +K +IGWG QIRSYVL +KDLRTN+E ++ VLDGD+D F++A+L Sbjct: 241 KQIMEDNKADIGWGSQIRSYVLD-ASRIKDLRTNVETSNTQAVLDGDIDQFIEASLK 296 >gi|21282445|ref|NP_645533.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus MW2] gi|88194533|ref|YP_499328.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|161509023|ref|YP_001574682.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|21203882|dbj|BAB94581.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus MW2] gi|87202091|gb|ABD29901.1| peptide chain release factor 2, putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|160367832|gb|ABX28803.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus USA300_TCH1516] Length = 291 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 151/286 (52%), Positives = 196/286 (68%), Gaps = 1/286 (0%) Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 +L EE D + ++ + K +V+ + + LL G D+N+A LE+H GAGGT Sbjct: 1 MDATWDLLQEEFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGT 60 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 ESQDWANML RMY R+ EK+ FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVH Sbjct: 61 ESQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVH 120 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 RLVRISP+DS+ RRHTSF+S V P +D IEIEI+ D +DT+RASGAGGQH+N T+ Sbjct: 121 RLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTE 180 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SA+RITH P+G+VV Q ERSQ KN+ A ML++KLY+L+L+++ + EIG Sbjct: 181 SAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIG 240 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 WG QIRSYV PY MVKD RTN E V+DGD+ F+++ L Sbjct: 241 WGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLRQ 286 >gi|327253901|gb|EGE65530.1| peptide chain release factor 1 [Escherichia coli STEC_7v] Length = 360 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 113/344 (32%), Positives = 179/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + + + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGEAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ ++ + + Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + D+ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A+++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R+Y P V D R N+ +V++G LD ++ + + Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 349 >gi|258422882|ref|ZP_05685782.1| peptide chain release factor 1 [Staphylococcus aureus A9635] gi|257846906|gb|EEV70920.1| peptide chain release factor 1 [Staphylococcus aureus A9635] Length = 358 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 114/351 (32%), Positives = 185/351 (52%), Gaps = 13/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D +R LN DP + + + + +E+ L + + + + + Sbjct: 1 MFDQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKAKKEELAD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 + E+ E DD ++ + IK E+ + + D D +E+ A AGG Sbjct: 61 IEEMLSETDDKEEVEMLKEESSGIKAELPNIEEELKILLIPKDPNDDKDVIVEIRAAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L+RMY+++AE + FKTE +E + + G K + + G AY LK E G Sbjct: 121 DEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +EIEI D +IDTYR+SGAGGQHVNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTGV+ E+SQ +N+ +A +L+A+LY++++Q EE K+ +G Sbjct: 240 SAVRITHLPTGVIATSS-EKSQIQNREKAMKVLKARLYDMKVQ--EEQQKYASQRKSAVG 296 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++G L++ + A ++ Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGHLEEIIDALTLSEQ 346 >gi|89054297|ref|YP_509748.1| peptide chain release factor 1 [Jannaschia sp. CCS1] gi|119361551|sp|Q28RD9|RF1_JANSC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|88863846|gb|ABD54723.1| bacterial peptide chain release factor 1 (bRF-1) [Jannaschia sp. CCS1] Length = 354 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 118/344 (34%), Positives = 176/344 (51%), Gaps = 12/344 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R +L + + + + RE L ++ I + L D + Sbjct: 10 LRQITDRFEYLEAQLNGG---PDPSDIAKISREYAELKPVVAEIAGYEQLLADMAEAQNM 66 Query: 76 ALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + +E I + Q L AD+ A +E+ G GG E+ +A Sbjct: 67 LADPDMRPLAEEELPRLEAAIPAAEQSLQLALLPKDAADAKPAMIEIRPGTGGDEAALFA 126 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE R ++ E +++ + + GIK T ++G N + LK E GVHR+ R+ Sbjct: 127 GDLLRMYTRYAEARGWRLEIVDLQESDLGGIKECTARVEGENVFARLKFESGVHRVQRVP 186 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P + ++I+I +D RIDT RASGAGGQHVNTTDSAVRITH Sbjct: 187 ETESGGRIHTSAATVAVLP-EAEDVDIDIPATDIRIDTMRASGAGGQHVNTTDSAVRITH 245 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +P+G+VV E+SQH+N+ A LR +LY+LE QK + K +IG G + Sbjct: 246 VPSGIVV-VSSEKSQHRNREIAMQTLRTRLYDLERQK--ADDAMAADRKAQIGSGDRSER 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ V+ GDLD+ + A A + Sbjct: 303 IRTYNF-PQGRMTDHRINLTLYKLDAVMLGDLDEIVDALTAEDQ 345 >gi|15604741|ref|NP_219525.1| peptide chain release factor 1 [Chlamydia trachomatis D/UW-3/CX] gi|76788735|ref|YP_327821.1| peptide chain release factor 1 [Chlamydia trachomatis A/HAR-13] gi|237804372|ref|YP_002888526.1| peptide chain release factor 1 [Chlamydia trachomatis B/TZ1A828/OT] gi|255310824|ref|ZP_05353394.1| peptide chain release factor 1 [Chlamydia trachomatis 6276] gi|255317124|ref|ZP_05358370.1| peptide chain release factor 1 [Chlamydia trachomatis 6276s] gi|7388050|sp|O84026|RF1_CHLTR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361522|sp|Q3KMZ9|RF1_CHLTA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|3328413|gb|AAC67613.1| Peptide Chain Releasing Factor (RF-1) [Chlamydia trachomatis D/UW-3/CX] gi|76167265|gb|AAX50273.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis A/HAR-13] gi|231272672|emb|CAX09575.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis B/TZ1A828/OT] gi|296435539|gb|ADH17713.1| peptide chain release factor 1 [Chlamydia trachomatis G/9768] gi|296436463|gb|ADH18633.1| peptide chain release factor 1 [Chlamydia trachomatis G/11222] gi|296437399|gb|ADH19560.1| peptide chain release factor 1 [Chlamydia trachomatis G/11074] gi|297139898|gb|ADH96656.1| peptide chain release factor 1 [Chlamydia trachomatis G/9301] gi|297748154|gb|ADI50700.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Chlamydia trachomatis D-EC] gi|297749034|gb|ADI51712.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Chlamydia trachomatis D-LC] Length = 359 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 110/338 (32%), Positives = 173/338 (51%), Gaps = 11/338 (3%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI----QDRLCDNLILLELA 76 +RL + + DP+++ N E L +E L + + + + D L L Sbjct: 10 KRLEEVEKQISDPNIFSNPKEYSSLSKEHARLSEIKNAHESLVATKKILQDDKLALSTEK 69 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 E + + + ++ + + + D +E+ AG GG E+ + Sbjct: 70 DPEIVAMLEEGVLVGEEAVERLSKQLENLLIPPDPDDDLSVIMELRAGTGGDEAALFVGD 129 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 +RMY +A + ++ E L + + G K + I G + +L+ E G HR+ R+ Sbjct: 130 CVRMYHLYAASKGWQCEVLSTSESDLGGYKEYVMGISGASVKRFLQYEAGTHRVQRVPET 189 Query: 197 DSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 ++ R HTS ++ V P +D E+ I E D RIDT+R+SGAGGQHVN TDSAVRITHI Sbjct: 190 ETQGRVHTSAVTVAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSAVRITHI 249 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 P+GVVV CQ ERSQHKNKA+A +L+A++ + E+QKR + A+ S ++G G +I Sbjct: 250 PSGVVVTCQDERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRS--AQVGSGDRSERI 307 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 R+Y P V D R + + V++G+LD A Sbjct: 308 RTYNF-PQNRVTDHRIGLTLYNLDRVMEGELDMITTAL 344 >gi|254302818|ref|ZP_04970176.1| peptide chain release factor RF1 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323010|gb|EDK88260.1| peptide chain release factor RF1 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 357 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 120/351 (34%), Positives = 182/351 (51%), Gaps = 11/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + V R LN P + + + + + + KE + + D Sbjct: 1 MFDKLEEVVTRYDELNKMLVSPEVLADSKKMIECNKAINEITEIVEKYKEYKKYVDDIEF 60 Query: 72 LLELALEEDDCSILQE----TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + E E D + + + +++ E + L + D + +E+ GAGG Sbjct: 61 IKESFKTEKDSEMKEMLNEELKEAEEKLPKLEEELKILLLPKDKNDDKNVIVEIRGGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE++K+K E +E DGE GIK I G AY LK E GV Sbjct: 121 DEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELGGIKEIAFTIIGLGAYSRLKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +++ R HTS +++ V P V+D E+ + D +IDTYR+ GAGGQHVN TD Sbjct: 181 HRVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVTVDPKDLKIDTYRSGGAGGQHVNMTD 240 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VVQCQ ERSQ KN+ +A L KLYE+E +K+ + ++G Sbjct: 241 SAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQRSEVE--SERRLQVG 298 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P + D R + LDGD+D+ + A + + Sbjct: 299 TGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQ 348 >gi|237731780|ref|ZP_04562261.1| peptide chain release factor 1 [Citrobacter sp. 30_2] gi|226907319|gb|EEH93237.1| peptide chain release factor 1 [Citrobacter sp. 30_2] Length = 360 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 113/337 (33%), Positives = 174/337 (51%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAGTIADQDRFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ + ++E Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQDELREAKEKCEQLEQHLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESRRWRVEIMSASEGEHGGFKEVIAKISGEGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + D+ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ +R++ + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVARRQQ--AEASERRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ + ++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLDMLIE 342 >gi|199597587|ref|ZP_03211016.1| Protein chain release factor A [Lactobacillus rhamnosus HN001] gi|258508166|ref|YP_003170917.1| peptide chain release factor 1 [Lactobacillus rhamnosus GG] gi|258539381|ref|YP_003173880.1| peptide chain release factor 1 [Lactobacillus rhamnosus Lc 705] gi|199591610|gb|EDY99687.1| Protein chain release factor A [Lactobacillus rhamnosus HN001] gi|257148093|emb|CAR87066.1| Peptide chain release factor 1 [Lactobacillus rhamnosus GG] gi|257151057|emb|CAR90029.1| Peptide chain release factor 1 [Lactobacillus rhamnosus Lc 705] gi|259649483|dbj|BAI41645.1| peptide chain release factor [Lactobacillus rhamnosus GG] Length = 359 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 108/352 (30%), Positives = 178/352 (50%), Gaps = 12/352 (3%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +F+ D + R L DP + + L +E + + ++ K+ + L D Sbjct: 3 KIFEQLDGLLVRYEELEELMSDPEVISDTKRYLALSKEEGGMRDVVAAYKKYKQVLSDIK 62 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAG 126 E+ E D + ++L+ ++ + + L D + +E+ AG Sbjct: 63 ESEEVLRESKDEDMEALAKEDLEDLQKQKADLEEKIKVLMLPKDPNDDKNIIMEIRGAAG 122 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A LL MY +AE++ +K E ++ E G K ++I G N Y LK E G Sbjct: 123 GDEASLFAGDLLNMYMHYAERQGWKAEIVDSTPTEVGGYKEVVVMITGDNVYSKLKYENG 182 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P D ++++I D R D YR+SGAGGQHVN T Sbjct: 183 AHRVQRVPVTESAGRVHTSTATVGVMP-EYDEVDLKIDPKDIRTDVYRSSGAGGQHVNKT 241 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+THIPTG+VV Q ERSQ +N+A+A +LR+++Y+ + +E ++ K I Sbjct: 242 SSAVRMTHIPTGIVVSMQDERSQQENRARAMQILRSRVYDYYETENQE--KYDQNRKNAI 299 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R + +++G+LD+ + A + + Sbjct: 300 GTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIVHDQ 350 >gi|328885059|emb|CCA58298.1| Peptide chain release factor 1 [Streptomyces venezuelae ATCC 10712] Length = 358 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 117/350 (33%), Positives = 172/350 (49%), Gaps = 16/350 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + V + L K DP + + A+ L + L ++ + + D Sbjct: 1 MFEAVEELVGEHADLEKKLADPSVHADQANARKLNKRYAELTPIVATYRAWKQTGDDIET 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EL DD E + E + + +D D LE+ AGAGG ES Sbjct: 61 AREL--AHDDPDFAAEVKQLEKDRDELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG----------PNAYGWL 181 +A LLRMY R+AE+ +KTE ++ + E G K + +K + L Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVAVKTKGGNGATEPGQGVWARL 178 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHR+ R+ +S R HTS + + V P + +E+EI +D RID YR+SG GGQ Sbjct: 179 KYEGGVHRVQRVPATESAGRIHTSAAGVLVTP-EAEEVEVEIHANDLRIDVYRSSGPGGQ 237 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PTG+V CQ E+SQ +NK QA +LR++L ++ E A Sbjct: 238 SVNTTDSAVRITHLPTGIVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAESKAADARR 297 Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 S+ + +IR+Y P + D R + + VLDGDLD ++A Sbjct: 298 SQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLDAMIQAC 346 >gi|296505754|ref|YP_003667454.1| peptide chain release factor 1 [Bacillus thuringiensis BMB171] gi|46576766|sp|Q812I4|RF1_BACCR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|296326806|gb|ADH09734.1| peptide chain release factor 1 [Bacillus thuringiensis BMB171] Length = 355 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 117/351 (33%), Positives = 181/351 (51%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68 + D R LN DP + + + + +E+ + + +E +D +L D Sbjct: 1 MLDRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQLKD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127 +LE L+ + +++E L+ + + + + D + +EV AGG Sbjct: 61 AKAMLEDKLDAEMREMVKEEVSELESQDKTLSERLKILLVPKDPNDDKNVIVEVRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE + +KTE +E E G K +I G A+ LK E G Sbjct: 121 DEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +EI+I E D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K +G Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L G LDDF+ A + + Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 347 >gi|205375314|ref|ZP_03228104.1| peptide chain release factor 1 [Bacillus coahuilensis m4-4] Length = 356 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 105/351 (29%), Positives = 175/351 (49%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD R LN DP + + + + +E+ + +E +D Sbjct: 1 MFDRLQAVEDRYDKLNELLSDPEVVSDPKKLREYSKEQSGHQATVEAYREYKDAKEQYND 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 ++ ++ D + + + + ++ ++E + + D + +EV AGG Sbjct: 61 AKQMLEDKLDPEMREMVKEEISELEEQIESLEERMKILLIPKDPNDDKNVIMEVRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE + +KTE +E G K +I G A+ +K E G Sbjct: 121 EEAALFAGTLYRMYSRFAEMQGWKTEVIESSPTGLGGYKEIIFMINGNGAFSKMKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ P + +EIEI + D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLP-EAEEVEIEIHDKDIRVDTFASSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG VV CQ E+SQ KNK +A +LRA++Y+ ++E A K+ +G Sbjct: 240 SAVRLTHLPTGTVVSCQDEKSQIKNKEKAMKVLRARVYDKF--QQEAQAEYDAQRKSAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L+G +D+ + A + + Sbjct: 298 SGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKMDEVIDALILEDQ 347 >gi|49484342|ref|YP_041566.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus MRSA252] gi|82751719|ref|YP_417460.1| peptide chain release factor 1 [Staphylococcus aureus RF122] gi|257426257|ref|ZP_05602672.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus 55/2053] gi|257428915|ref|ZP_05605309.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus 65-1322] gi|257431524|ref|ZP_05607897.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus 68-397] gi|257434233|ref|ZP_05610583.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus E1410] gi|257437146|ref|ZP_05613186.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus M876] gi|282904787|ref|ZP_06312661.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus C160] gi|282906462|ref|ZP_06314313.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus Btn1260] gi|282909431|ref|ZP_06317246.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911683|ref|ZP_06319482.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus WBG10049] gi|282914967|ref|ZP_06322747.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus M899] gi|282917467|ref|ZP_06325220.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus D139] gi|282920296|ref|ZP_06328020.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus C427] gi|282925507|ref|ZP_06333161.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus C101] gi|283771286|ref|ZP_06344175.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus H19] gi|283958898|ref|ZP_06376343.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus A017934/97] gi|293509035|ref|ZP_06667822.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus 58-424] gi|293510950|ref|ZP_06669649.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus M809] gi|293547552|ref|ZP_06672227.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus M1015] gi|295428705|ref|ZP_06821331.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus EMRSA16] gi|297589815|ref|ZP_06948455.1| peptide chain release factor RF1 [Staphylococcus aureus subsp. aureus MN8] gi|56749405|sp|Q6GEV7|RF1_STAAR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361615|sp|Q2YUN5|RF1_STAAB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|49242471|emb|CAG41187.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus MRSA252] gi|82657250|emb|CAI81691.1| peptide chain release factor 1 [Staphylococcus aureus RF122] gi|257270962|gb|EEV03135.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus 55/2053] gi|257274257|gb|EEV05774.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus 65-1322] gi|257277765|gb|EEV08435.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus 68-397] gi|257280872|gb|EEV11017.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus E1410] gi|257283539|gb|EEV13666.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus M876] gi|282312908|gb|EFB43309.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus C101] gi|282316156|gb|EFB46537.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus C427] gi|282318669|gb|EFB49026.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus D139] gi|282321170|gb|EFB51501.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus M899] gi|282324448|gb|EFB54761.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus WBG10049] gi|282326701|gb|EFB56999.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330412|gb|EFB59930.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus Btn1260] gi|282594820|gb|EFB99797.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus C160] gi|283459491|gb|EFC06584.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus H19] gi|283789616|gb|EFC28439.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus A017934/97] gi|290919672|gb|EFD96745.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus M1015] gi|291094739|gb|EFE25011.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus 58-424] gi|291466235|gb|EFF08762.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus M809] gi|295127375|gb|EFG57015.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus EMRSA16] gi|297576943|gb|EFH95657.1| peptide chain release factor RF1 [Staphylococcus aureus subsp. aureus MN8] gi|298695392|gb|ADI98614.1| Peptide chain release factor 1 [Staphylococcus aureus subsp. aureus ED133] gi|302333764|gb|ADL23957.1| peptide chain release factor RF1 [Staphylococcus aureus subsp. aureus JKD6159] gi|312437464|gb|ADQ76535.1| peptide chain release factor RF1 [Staphylococcus aureus subsp. aureus TCH60] gi|315193283|gb|EFU23681.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus CGS00] gi|323439333|gb|EGA97057.1| peptide chain release factor 1 [Staphylococcus aureus O11] gi|323442458|gb|EGB00087.1| peptide chain release factor 1 [Staphylococcus aureus O46] Length = 358 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 114/351 (32%), Positives = 185/351 (52%), Gaps = 13/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D +R LN DP + + + + +E+ L + + + + + Sbjct: 1 MFDQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKAKKEELAD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 + E+ E DD ++ + IK E+ + + D D +E+ A AGG Sbjct: 61 IEEMLSETDDKEEVEMLKEESSGIKAELPNLEEELKILLIPKDPNDDKDVIVEIRAAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L+RMY+++AE + FKTE +E + + G K + + G AY LK E G Sbjct: 121 DEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +EIEI D +IDTYR+SGAGGQHVNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTGV+ E+SQ +N+ +A +L+A+LY++++Q EE K+ +G Sbjct: 240 SAVRITHLPTGVIATSS-EKSQIQNREKAMKVLKARLYDMKVQ--EEQQKYASQRKSAVG 296 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++G L++ + A ++ Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGHLEEIIDALTLSEQ 346 >gi|254509155|ref|ZP_05121254.1| peptide chain release factor 1 [Vibrio parahaemolyticus 16] gi|219547906|gb|EED24932.1| peptide chain release factor 1 [Vibrio parahaemolyticus 16] Length = 362 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 114/346 (32%), Positives = 184/346 (53%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R + DP + + + + L +E L+ + Q D + E+ Sbjct: 9 LETLVERYEEVQHLLGDPDIIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQEDLVAAEEM 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 A E+D+ + + I+ + Q L D + +LE+ AGAGG E+ Sbjct: 69 AKEDDEEMREMAQEEIKEAKETIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AEK+ ++ E + ++ E G K + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSKFAEKQGWRVEVMSSNESEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RI Sbjct: 189 VPATESQGRVHTSACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311 TH+PTG VV+CQ ERSQHKNKA+A +L A++ ++ ++ + A ++ + +G G + Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARI--IQAEEAKRAAEESDTRRNLLGSGDRS 306 Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ ++V++GDL + + + Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTIYRLNEVMEGDLASLVDPVIQEHQ 351 >gi|270261428|ref|ZP_06189701.1| peptide chain release factor 1 [Serratia odorifera 4Rx13] gi|270044912|gb|EFA18003.1| peptide chain release factor 1 [Serratia odorifera 4Rx13] Length = 361 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 112/337 (33%), Positives = 172/337 (51%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + E + D + Sbjct: 9 LEALQERHEEVQALLGDAGVIAEQDRFRALSREYSQLTDVSRCFLEWRQVQEDLATAEMM 68 Query: 76 ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E + + Q L D +LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQEEMKQAKAATEELEQQLQVLLLPKDPDDERGIFLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + ++GE G K + G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAETRRWRVEIMSANEGEHGGYKEVIAKVSGDGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P V ++ EI+ D +IDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVMPEVPEAELPEINAGDLKIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKRQQE--EASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ +V++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTIYRLDEVMEGKLDMLIQ 342 >gi|119505822|ref|ZP_01627888.1| peptide chain release factor 1 [marine gamma proteobacterium HTCC2080] gi|119458320|gb|EAW39429.1| peptide chain release factor 1 [marine gamma proteobacterium HTCC2080] Length = 362 Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats. Identities = 113/346 (32%), Positives = 169/346 (48%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V R + DP ++ + L RE LD + + D E+ Sbjct: 9 LASLVDRHEEVAALLGDPETAEDTNLFRELSREYSQLDEVVVAFTAYRTATADVEAAQEM 68 Query: 76 ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + Q L + DSN+ YLE+ AG GG E+ Sbjct: 69 LSDSDPELREMAADELAVSTELVAKIESDLQVLLLPRDKRDSNNVYLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AE + ++ E + G+ G K + G + Y +LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAESKGWRLETISDRAGDHGGFKEIISRVVGNDVYAYLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V DD I+I + D R+DT+R+SGAGGQHVNTTDSAVRI Sbjct: 189 VPETESQGRIHTSACTVAVMAEPDDVEAIDIRKEDLRVDTFRSSGAGGQHVNTTDSAVRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTGVVV+CQ ERSQHKN+A+A ++L A+L K + + +G G Sbjct: 249 THLPTGVVVECQDERSQHKNRARAMSLLSARLLTAAEDK--AHSEQAAERRNLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +++ G LD ++ + Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYKLDEIVQGQLDALVQPLRTEHQ 351 >gi|30249865|ref|NP_841935.1| peptide chain release factor 1 [Nitrosomonas europaea ATCC 19718] gi|46576779|sp|Q82TH4|RF1_NITEU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|30180902|emb|CAD85824.1| prfA: peptide chain release factor 1 [Nitrosomonas europaea ATCC 19718] Length = 359 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 118/351 (33%), Positives = 178/351 (50%), Gaps = 10/351 (2%) Query: 11 GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 G+ D RL L+ + ++ + L RER ++ + Q D Sbjct: 3 KGIIDQLTRLSMRLGELDKLLSTEKITADLDNYRKLSRERAEIEPVTELYRTYQQVEQDL 62 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGG 127 E++ + E R KL + D + +LE+ AG GG Sbjct: 63 ATAREMSSDP-QFRDFAEAEIEADRRKLTNIETEILRQLLPKDPNDERNIFLEIRAGTGG 121 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 ES +A L RMY+R+AE+ ++ E + + E G K + I G AY LK E G Sbjct: 122 DESALFAGDLFRMYSRYAEREGWQVEVVSQNPSEVGGYKEIIVRIIGHGAYSRLKFESGG 181 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS ++ V P D+ +I ++ +D RIDT+RASGAGGQH+N TD Sbjct: 182 HRVQRVPATETQGRVHTSTCTVAVLPEADEIADITLNPADLRIDTFRASGAGGQHINKTD 241 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+V +CQ+ RSQHKNKAQA ++L A++ L+ Q R + A + K+ +G Sbjct: 242 SAVRITHLPTGIVAECQEGRSQHKNKAQAMSVLIARI--LDKQVRAQQAEQAATRKSLVG 299 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P + D R N+ ++DG+LD+ A A + Sbjct: 300 SGERSERIRTYNF-PQGRITDHRINLTLYKIEQIIDGELDELCSALAAEHQ 349 >gi|229164277|ref|ZP_04292210.1| Peptide chain release factor 1 [Bacillus cereus R309803] gi|228619217|gb|EEK76110.1| Peptide chain release factor 1 [Bacillus cereus R309803] Length = 358 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 111/347 (31%), Positives = 172/347 (49%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R LN DP + + + + +E+ + + +E +D + Sbjct: 8 LQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQETVEVYREYKDVREQLKDAKAM 67 Query: 76 ALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ++ D + + + + + K + + D + +EV AGG E+ Sbjct: 68 LEDKLDAEMREMVKEEVSELEGQDKELSARLKILLVPKDPNDDKNVIVEVRGAAGGDEAA 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AE + +KTE +E E G K +I G A+ LK E G HR+ Sbjct: 128 LFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + +EI+I E D R+DT+ +SG GGQ VNTT SAVR Sbjct: 188 RVPETESGGRIHTSTATVAVLP-EAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTMSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K +G G Sbjct: 247 LTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LDDF+ A + + Sbjct: 305 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350 >gi|327399685|ref|YP_004340554.1| peptide chain release factor 1 [Hippea maritima DSM 10411] gi|327182314|gb|AEA34495.1| Peptide chain release factor 1 [Hippea maritima DSM 10411] Length = 354 Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats. Identities = 123/337 (36%), Positives = 187/337 (55%), Gaps = 8/337 (2%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 ++ T+ DP++ ++ K L E + L + KE ++ L EL +E+ Sbjct: 13 YKYIETQLSDPNVVGDLDRYKSLSSEIKKLTPIVEKAKEYRNILRQIEENEELLEDEELK 72 Query: 83 SILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141 + +E +L+ + + L EAD D LE+ AG GG E+ +A L RMY Sbjct: 73 ELAKEELKHLKERLPELEQEIKLLLLPKDEADDRDVILEIRAGTGGEEAALFAADLFRMY 132 Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 +R+AE + FK E L + GIK IKG AY K E G HR+ RI +S R Sbjct: 133 SRYAENKGFKVEVLSKSLSDTGGIKEIIAEIKGKGAYHLFKHESGTHRVQRIPITESQGR 192 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 HTS +++ V P +++++EI D RID +RASG GGQHVNTTDSAVRITH+PTG+VV Sbjct: 193 IHTSAATVAVLP-EAENVDVEIKPEDLRIDVFRASGHGGQHVNTTDSAVRITHLPTGMVV 251 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318 CQ E+SQ KNK +A +L+++LY+ +K++E + K++IG G +IR+Y Sbjct: 252 SCQDEKSQLKNKEKALKILKSRLYDFYRRKKDEER--AKERKSQIGSGDRSERIRTYNF- 308 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 P V D R N+ +++GDLD+ ++A + ++ Sbjct: 309 PQGRVTDHRINLTLYKLDSIMEGDLDELIEALIVDEQ 345 >gi|325981709|ref|YP_004294111.1| peptide chain release factor 1 [Nitrosomonas sp. AL212] gi|325531228|gb|ADZ25949.1| peptide chain release factor 1 [Nitrosomonas sp. AL212] Length = 359 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 113/348 (32%), Positives = 180/348 (51%), Gaps = 8/348 (2%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D RL LN ++ + L RE + + + Q D Sbjct: 5 IMDRLTRLSVRLDELNHLLSSESATADLDHYRKLTREHAEIVPIVELYRSYQHFERDVQT 64 Query: 72 LLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E+ + D + + + ++ Q + L D + +LE+ AG GG ES Sbjct: 65 AREMHADLDMRAFAETEIQIGKEKLIQIESEIQKQLLPKDPNDERNIFLEIRAGTGGDES 124 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY+R+AE+++++ E + E G K I G AY LK E G HR+ Sbjct: 125 ALFAGNLFRMYSRYAERQRWQVEIISQSLSEIGGYKEIIAKIIGYGAYSKLKFESGGHRV 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS ++ + P D+ E+ ++ ++ RIDT+RASGAGGQH+N TDSAV Sbjct: 185 QRVPVTETQGRVHTSTCTVAIMPEADEVSEVVLNPAELRIDTFRASGAGGQHINKTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+TH+PTG+VV+CQ RSQHKNKAQA ++L A++++ ++ R + A + K+ +G G Sbjct: 245 RVTHLPTGIVVECQDGRSQHKNKAQALSVLAARIHDKQM--RAQHAEQAAARKSLVGTGE 302 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ ++DGD+D+ A +A + Sbjct: 303 RSERIRTYNF-PQGRVTDHRINLTLYKMDQIMDGDIDELCSALMAEHQ 349 >gi|167464538|ref|ZP_02329627.1| peptide chain release factor 1 [Paenibacillus larvae subsp. larvae BRL-230010] Length = 357 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 117/351 (33%), Positives = 180/351 (51%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D R L+ DP + + + + +E+ L A E + L Sbjct: 2 MLDRLQALADRYEKLSELLCDPDVTSDTKKLREYSKEQSGLQEAYDTYMEYKQVLGQLEA 61 Query: 72 LLELALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + E+ D + + ++ R + E + L D+ + +EV AGG Sbjct: 62 AKAMQKEKLDDEMSELVKMEIEELSGRKEELEERLKILMLPKDPNDNKNVIVEVRGAAGG 121 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE + +KTE L+ + + G K T +IKG AY LK E G Sbjct: 122 DEAALFAADLYRMYSRYAESQGWKTEVLDANLNDLGGFKEITFMIKGNGAYSKLKYESGA 181 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +S R HTS S++ V P + I+IEI +SD R+DT+ +SGAGGQ VNTT Sbjct: 182 HRVQRIPVTESGGRIHTSTSTVAVMP-EMEDIDIEIKDSDIRVDTFCSSGAGGQSVNTTK 240 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+V CQ +SQ+ NKA+A +LRA++Y+ ++EE A K+++G Sbjct: 241 SAVRVTHVPTGIVATCQDGKSQNDNKAKALQVLRARIYD--QVRQEEEAKYAGERKSKVG 298 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L GDL++ + A + Sbjct: 299 TGDRSERIRTYNF-PQSRVTDHRIGLTLHKLDSILGGDLEEIITALTMAAQ 348 >gi|15925108|ref|NP_372642.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus Mu50] gi|15927692|ref|NP_375225.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus N315] gi|21283771|ref|NP_646859.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus MW2] gi|49486911|ref|YP_044132.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus MSSA476] gi|57652140|ref|YP_186925.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus COL] gi|87160795|ref|YP_494718.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88196022|ref|YP_500835.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148268569|ref|YP_001247512.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus JH9] gi|150394633|ref|YP_001317308.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus JH1] gi|151222234|ref|YP_001333056.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus str. Newman] gi|156980433|ref|YP_001442692.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus Mu3] gi|161510323|ref|YP_001575982.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221141637|ref|ZP_03566130.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253315787|ref|ZP_04839000.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253731044|ref|ZP_04865209.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733048|ref|ZP_04867213.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus TCH130] gi|255006906|ref|ZP_05145507.2| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257793876|ref|ZP_05642855.1| peptide chain release factor 1 [Staphylococcus aureus A9781] gi|258407044|ref|ZP_05680194.1| peptide chain release factor 1 [Staphylococcus aureus A9763] gi|258422066|ref|ZP_05684983.1| peptide chain release factor 1 [Staphylococcus aureus A9719] gi|258433565|ref|ZP_05688638.1| peptide chain release factor 1 [Staphylococcus aureus A9299] gi|258440460|ref|ZP_05690630.1| peptide chain release factor 1 [Staphylococcus aureus A8115] gi|258445668|ref|ZP_05693846.1| peptide chain release factor 1 [Staphylococcus aureus A6300] gi|258450122|ref|ZP_05698217.1| peptide chain release factor RF1 [Staphylococcus aureus A6224] gi|258453423|ref|ZP_05701405.1| peptide chain release factor 1 [Staphylococcus aureus A5937] gi|262049285|ref|ZP_06022160.1| peptide chain release factor 1 [Staphylococcus aureus D30] gi|262052620|ref|ZP_06024814.1| peptide chain release factor 1 [Staphylococcus aureus 930918-3] gi|269203754|ref|YP_003283023.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus ED98] gi|282894762|ref|ZP_06302988.1| peptide chain release factor 1 [Staphylococcus aureus A8117] gi|282923106|ref|ZP_06330791.1| peptide chain release factor 1 [Staphylococcus aureus A9765] gi|282929042|ref|ZP_06336627.1| peptide chain release factor 1 [Staphylococcus aureus A10102] gi|284025152|ref|ZP_06379550.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus 132] gi|294850088|ref|ZP_06790825.1| peptide chain release factor 1 [Staphylococcus aureus A9754] gi|295407048|ref|ZP_06816850.1| peptide chain release factor 1 [Staphylococcus aureus A8819] gi|296275403|ref|ZP_06857910.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus MR1] gi|297210061|ref|ZP_06926454.1| peptide chain release factor RF1 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297246047|ref|ZP_06929904.1| peptide chain release factor 1 [Staphylococcus aureus A8796] gi|300910424|ref|ZP_07127876.1| peptide chain release factor RF1 [Staphylococcus aureus subsp. aureus TCH70] gi|304379299|ref|ZP_07362038.1| peptide chain release factor RF1 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|54039049|sp|P66019|RF1_STAAN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|54039050|sp|P66020|RF1_STAAW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|54041594|sp|P66018|RF1_STAAM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|56749376|sp|Q6G7J2|RF1_STAAS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|71153097|sp|Q5HE82|RF1_STAAC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361613|sp|Q2FF10|RF1_STAA3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361614|sp|Q2FWE0|RF1_STAA8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223609|sp|A7X4W4|RF1_STAA1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|172048990|sp|A6QIW2|RF1_STAAE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189039994|sp|A6U3K3|RF1_STAA2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189039995|sp|A5IUR3|RF1_STAA9 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189039996|sp|A8YY83|RF1_STAAT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|13701912|dbj|BAB43204.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus N315] gi|14247891|dbj|BAB58280.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus Mu50] gi|21205213|dbj|BAB95907.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus MW2] gi|49245354|emb|CAG43829.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus MSSA476] gi|57286326|gb|AAW38420.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus COL] gi|87126769|gb|ABD21283.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203580|gb|ABD31390.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147741638|gb|ABQ49936.1| bacterial peptide chain release factor 1 (bRF-1) [Staphylococcus aureus subsp. aureus JH9] gi|149947085|gb|ABR53021.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus JH1] gi|150375034|dbj|BAF68294.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus str. Newman] gi|156722568|dbj|BAF78985.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus Mu3] gi|160369132|gb|ABX30103.1| peptide chain release factor RF1 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253725232|gb|EES93961.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728956|gb|EES97685.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus TCH130] gi|257787848|gb|EEV26188.1| peptide chain release factor 1 [Staphylococcus aureus A9781] gi|257841377|gb|EEV65821.1| peptide chain release factor 1 [Staphylococcus aureus A9763] gi|257841966|gb|EEV66398.1| peptide chain release factor 1 [Staphylococcus aureus A9719] gi|257849296|gb|EEV73275.1| peptide chain release factor 1 [Staphylococcus aureus A9299] gi|257852529|gb|EEV76447.1| peptide chain release factor 1 [Staphylococcus aureus A8115] gi|257855507|gb|EEV78444.1| peptide chain release factor 1 [Staphylococcus aureus A6300] gi|257856596|gb|EEV79502.1| peptide chain release factor RF1 [Staphylococcus aureus A6224] gi|257864404|gb|EEV87150.1| peptide chain release factor 1 [Staphylococcus aureus A5937] gi|259159490|gb|EEW44540.1| peptide chain release factor 1 [Staphylococcus aureus 930918-3] gi|259162650|gb|EEW47217.1| peptide chain release factor 1 [Staphylococcus aureus D30] gi|262076044|gb|ACY12017.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus ED98] gi|269941717|emb|CBI50124.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus TW20] gi|282589348|gb|EFB94440.1| peptide chain release factor 1 [Staphylococcus aureus A10102] gi|282593297|gb|EFB98294.1| peptide chain release factor 1 [Staphylococcus aureus A9765] gi|282762850|gb|EFC02984.1| peptide chain release factor 1 [Staphylococcus aureus A8117] gi|285817782|gb|ADC38269.1| Peptide chain release factor 1 [Staphylococcus aureus 04-02981] gi|294823036|gb|EFG39468.1| peptide chain release factor 1 [Staphylococcus aureus A9754] gi|294968073|gb|EFG44100.1| peptide chain release factor 1 [Staphylococcus aureus A8819] gi|296885261|gb|EFH24201.1| peptide chain release factor RF1 [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297177046|gb|EFH36301.1| peptide chain release factor 1 [Staphylococcus aureus A8796] gi|300888266|gb|EFK83457.1| peptide chain release factor RF1 [Staphylococcus aureus subsp. aureus TCH70] gi|302751999|gb|ADL66176.1| peptide chain release factor RF1 [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304342158|gb|EFM08058.1| peptide chain release factor RF1 [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312830470|emb|CBX35312.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315128789|gb|EFT84789.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus CGS03] gi|315196948|gb|EFU27290.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus CGS01] gi|320140710|gb|EFW32562.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus MRSA131] gi|320143686|gb|EFW35463.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus MRSA177] gi|329314803|gb|AEB89216.1| Peptide chain release factor 1 [Staphylococcus aureus subsp. aureus T0131] gi|329723967|gb|EGG60491.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus 21189] gi|329726324|gb|EGG62792.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus 21172] gi|329729314|gb|EGG65722.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus 21193] Length = 358 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 114/351 (32%), Positives = 185/351 (52%), Gaps = 13/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D +R LN DP + + + + +E+ L + + + + + Sbjct: 1 MFDQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKAKKEELAD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 + E+ E DD ++ + IK E+ + + D D +E+ A AGG Sbjct: 61 IEEMLSETDDKEEVEMLKEESNGIKAELPNLEEELKILLIPKDPNDDKDVIVEIRAAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L+RMY+++AE + FKTE +E + + G K + + G AY LK E G Sbjct: 121 DEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +EIEI D +IDTYR+SGAGGQHVNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTGV+ E+SQ +N+ +A +L+A+LY++++Q EE K+ +G Sbjct: 240 SAVRITHLPTGVIATSS-EKSQIQNREKAMKVLKARLYDMKVQ--EEQQKYASQRKSAVG 296 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++G L++ + A ++ Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGHLEEIIDALTLSEQ 346 >gi|298244286|ref|ZP_06968092.1| peptide chain release factor 2 [Ktedonobacter racemifer DSM 44963] gi|297551767|gb|EFH85632.1| peptide chain release factor 2 [Ktedonobacter racemifer DSM 44963] Length = 337 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 137/320 (42%), Positives = 211/320 (65%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 P W + +A+ M++ L ++ +++ +L D L + EE D + E + + Sbjct: 2 QPDFWSDNRKAQAHMQQLNALREEVTTWEQLATQLKDLQELALMLEEEPDDDMQAEVAQS 61 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 + I+ ++E +F +LSGE D +A L +HAG+GG ++QDWA MLLRMY RWA++ +F+ Sbjct: 62 IHPIEEQIEKLEFALMLSGEHDEKNAILSIHAGSGGVDAQDWAEMLLRMYLRWADQHRFR 121 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 T+ + +GEEAGIKSAT+ I+G AYG+L+ E G HRL+R+SP+D+ RR TSF+ + + Sbjct: 122 TQIYDYSEGEEAGIKSATVEIEGRFAYGYLRSEAGTHRLIRLSPFDAAHRRQTSFAKVEL 181 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P ++++IEI I D +DTYR++GAGGQHVN TDSAVR+ H+P+G+VV CQ ERSQ + Sbjct: 182 MPDIENTIEISIRPEDIEVDTYRSTGAGGQHVNKTDSAVRMRHVPSGIVVTCQNERSQLQ 241 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ A +L+A+L+ELE +K +E A + + +G QIRS ++ PY + KD RTN E Sbjct: 242 NREVALKILKARLFELEQKKHDEEAARLKGEHVQADFGTQIRSVIVHPYNIAKDHRTNHE 301 Query: 332 KTSPSDVLDGDLDDFMKATL 351 + + L G++D F+ A L Sbjct: 302 TSDTTAYLAGNVDPFIHAYL 321 >gi|227112636|ref|ZP_03826292.1| peptide chain release factor 2 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 293 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 167/290 (57%), Positives = 209/290 (72%), Gaps = 1/290 (0%) Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D LLELA+EEDD +T+ L ++ ++ +F + SG+ DS D YL++ A Sbjct: 3 QGLEDVNGLLELAVEEDDEETFNDTTVELDALENKLGQLEFRRMFSGQYDSADCYLDIQA 62 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTE+QDWA+ML+RMY RWAE + FKTE +E DG+ AG KSAT+ I G A+GWL+ Sbjct: 63 GSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTKSATIKIIGDYAFGWLRT 122 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHV Sbjct: 123 ETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHV 182 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ E +K Sbjct: 183 NRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQAMEDNK 242 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 ++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 243 SDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 291 >gi|194468250|ref|ZP_03074236.1| peptide chain release factor 1 [Lactobacillus reuteri 100-23] gi|194453103|gb|EDX42001.1| peptide chain release factor 1 [Lactobacillus reuteri 100-23] Length = 362 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 106/355 (29%), Positives = 181/355 (50%), Gaps = 12/355 (3%) Query: 9 CLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---D 64 + +FD R LN DP + + +E L + + + Sbjct: 2 EMEEIFDKLQAVADRYDELNELISDPEVIADSQRFMKFSKEEGSLRETVEKYNQYKKVTQ 61 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHA 123 + D+ LL ++D ++ +E + + ++E + + + D + +E+ Sbjct: 62 TISDDEELLRETNDDDLTALTKEELAEAREEQAQLEKELEVLLIPKDPNDDKNIIMEIRG 121 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 AGG E+ +A L MY R+AEK+ +K E ++ ++ E G K L+I G Y LK Sbjct: 122 AAGGDEASLFAADLYNMYLRYAEKQGWKVEVVDRNETEVGGFKEIALMITGDKVYSKLKF 181 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G HR+ R+ +S R HTS +++ V P + ++++I D R+D YR+SGAGGQHV Sbjct: 182 ENGAHRVQRVPVTESAGRVHTSTATVGVMP-EAEDVDVDIDPKDIRVDVYRSSGAGGQHV 240 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SAVR+TH+PTG+VV Q ERSQ +N+A+A +L++++Y+ +++E + + K Sbjct: 241 NKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYY--QQQEQSAYDQKRK 298 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IG G +IR+Y P V D R + ++ GDLD+ ++A + + Sbjct: 299 DAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGDLDEIIEALIVADQ 352 >gi|15827565|ref|NP_301828.1| peptide chain release factor 1 [Mycobacterium leprae TN] gi|221230042|ref|YP_002503458.1| peptide chain release factor 1 [Mycobacterium leprae Br4923] gi|13432207|sp|P45833|RF1_MYCLE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790892|sp|B8ZR31|RF1_MYCLB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|13093115|emb|CAC31515.1| peptide chain release factor 1 [Mycobacterium leprae] gi|219933149|emb|CAR71229.1| peptide chain release factor 1 [Mycobacterium leprae Br4923] Length = 361 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 116/350 (33%), Positives = 165/350 (47%), Gaps = 13/350 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + + L DP L N EA+ R L ++ +++ D EL Sbjct: 8 IDVLLIEHAELELALADPELHSNPAEARKAGRRFARLAPIVATHRKLISARDDLQTAREL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A ++ + ++ +D LEV +G GG ES +A Sbjct: 68 AAGDESFADEIAELESRIAELTTQLTDML--APHDPHGPDDIVLEVKSGEGGEESALFAA 125 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG---------PNAYGWLKGEQG 186 L RMY R+AE+ + L+ + G K ATL I + +K E G Sbjct: 126 DLARMYIRYAERHGWTVTVLDETTSDLGGYKDATLAISHKGASDGDAVDGVWSRMKFEGG 185 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S R HTS + + VYP ++ E+ I ESD RID YR+SG GGQ VNTT Sbjct: 186 VHRVQRVPVTESQGRVHTSAAGVLVYPEPEEIGEVHIDESDLRIDVYRSSGKGGQGVNTT 245 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE- 305 DSAVRITH+PTGVVV CQ ERSQ +NK +A +L A+L + ++ A+ +S+ Sbjct: 246 DSAVRITHLPTGVVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALANASADRASQIRT 305 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + +IR+Y P + D R + + VLDGDLD A A K Sbjct: 306 VDRSERIRTYNF-PENRITDHRIGYKAHNLDQVLDGDLDALFDALSAADK 354 >gi|218900455|ref|YP_002448866.1| peptide chain release factor 1 [Bacillus cereus G9842] gi|228903804|ref|ZP_04067920.1| Peptide chain release factor 1 [Bacillus thuringiensis IBL 4222] gi|228911168|ref|ZP_04074974.1| Peptide chain release factor 1 [Bacillus thuringiensis IBL 200] gi|228942476|ref|ZP_04105013.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228968458|ref|ZP_04129447.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar sotto str. T04001] gi|228975408|ref|ZP_04135964.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228982045|ref|ZP_04142338.1| Peptide chain release factor 1 [Bacillus thuringiensis Bt407] gi|218545538|gb|ACK97932.1| peptide chain release factor 1 [Bacillus cereus G9842] gi|228777709|gb|EEM25983.1| Peptide chain release factor 1 [Bacillus thuringiensis Bt407] gi|228784390|gb|EEM32413.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228791238|gb|EEM38851.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar sotto str. T04001] gi|228817218|gb|EEM63306.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228848531|gb|EEM93379.1| Peptide chain release factor 1 [Bacillus thuringiensis IBL 200] gi|228855831|gb|EEN00375.1| Peptide chain release factor 1 [Bacillus thuringiensis IBL 4222] gi|326943127|gb|AEA19023.1| peptide chain release factor 1 [Bacillus thuringiensis serovar chinensis CT-43] Length = 358 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 116/347 (33%), Positives = 180/347 (51%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72 R LN DP + + + + +E+ + + +E +D +L D + Sbjct: 8 LQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQETVEVYREYKDVREQLKDAKAM 67 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LE L+ + +++E L+ + + + + + D + +EV AGG E+ Sbjct: 68 LEEKLDAEMRDMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAGGDEAA 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AE + +KTE +E E G K +I G A+ LK E G HR+ Sbjct: 128 LFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + +EI+I E D R+DT+ +SG GGQ VNTT SAVR Sbjct: 188 RVPETESGGRIHTSTATVAVLP-EAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTMSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K +G G Sbjct: 247 LTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LDDF+ A + + Sbjct: 305 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350 >gi|165977491|ref|YP_001653084.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165877592|gb|ABY70640.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 333 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 109/324 (33%), Positives = 175/324 (54%), Gaps = 7/324 (2%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 + + + +E L+ ++ + D L + D + E + Sbjct: 2 INDQDKFRAYSKEYSQLEEVVTTFNRWKKLNSDIEEAQILLDDPDMKEMAAEEIAENKAE 61 Query: 96 KLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 +E Q L D +A+LE+ AG GG E+ +A L RMY+R+ E ++++ E Sbjct: 62 IENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFAGDLYRMYSRYCESKRWRIEE 121 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 + ++ E+ G K + I G YG LK E G HR+ R+ +S R HTS ++ V P Sbjct: 122 MSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPE 181 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA Sbjct: 182 LPESEMPEINPTDLRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKA 241 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIE 331 +A +L +++ ++E +++ ++ + +G G + IR+Y P V D R N+ Sbjct: 242 KALAVLASRIVQVEQERQAAEQ--ADTRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLT 298 Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355 +V++G +D+ ++ + + Sbjct: 299 VYRLDEVMNGKIDELIQPIITEYQ 322 >gi|90416952|ref|ZP_01224881.1| Peptide chain release factor 1 [marine gamma proteobacterium HTCC2207] gi|90331299|gb|EAS46543.1| Peptide chain release factor 1 [marine gamma proteobacterium HTCC2207] Length = 360 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 105/341 (30%), Positives = 170/341 (49%), Gaps = 9/341 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ +R + D + + + L +E L+ + +D + + L Sbjct: 9 LDHLSERYEEVGALLSDGDIISDQNRFRTLSKEYSELELLVKTYGSYKDVMENIEEAKLL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + Q L DS + +LE+ AG GG E+ Sbjct: 69 LKDSDTDMRDMAQEEMRSGEERRQVLELEIQKLLLPKDPKDSKNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+++AE ++K E + + G+ G K I G Y LK E G HR+ R Sbjct: 129 FSGDLFRMYSKYAETNRWKVEIISENSGDHGGYKEVIARIVGQGVYSKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ + D+ IEI++ D R+DT+RASG+GGQHVN TDSA+R+ Sbjct: 189 VPDTESQGRVHTSACTVAIMAEADEQDAIEINKGDLRVDTFRASGSGGQHVNKTDSAIRL 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+P+G+VV+CQ ERSQHKN+A+A ++L+A+L ++ + + K +G G Sbjct: 249 THLPSGLVVECQDERSQHKNRAKAMSVLQARLTAMQDE--AVAKEQSDQRKNLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R N+ +V++G LDD + Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYKLGEVMEGSLDDVLGPL 346 >gi|258645288|ref|ZP_05732757.1| peptide chain release factor 1 [Dialister invisus DSM 15470] gi|260402638|gb|EEW96185.1| peptide chain release factor 1 [Dialister invisus DSM 15470] Length = 360 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 108/346 (31%), Positives = 175/346 (50%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L + DP + N + + L +E L ++ + + + + Sbjct: 6 LDAMEARFRSLEDQLSDPSVISNQNKWRTLSKEHSDLGEIVTLYRSYKKVDKTCKEAVNI 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ++ + + + L+ + F + D + LE+ AG GG E+ Sbjct: 66 LEDKSQSDLHELAKEELKEAEKMKNELDKQIHFLLIPKDPNDGKNVILEIRAGTGGEEAA 125 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LL+MY ++AE + ++ E + ++ + G + T +I G NAY LK E GVHR+ Sbjct: 126 LFAADLLKMYLKFAENKGWRVELADANETDLGGFREVTCIIYGKNAYSLLKFESGVHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS ++ V P ++++I+I+ D RID YRASGAGGQH+N T SA+R Sbjct: 186 RIPATESQGRVHTSAVTVAVLP-EVENVDIDINRDDLRIDVYRASGAGGQHINKTSSAIR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIP+G+VV CQ ERSQ +NK +A +L+A+LY+ + RE K ++G G Sbjct: 245 ITHIPSGMVVTCQNERSQRQNKEKALQILKARLYDRAV--RESQDKTAADRKGQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P V D R N+ + L+G++D + + Sbjct: 303 SERIRTYNF-PQGRVTDHRVNVSVYQLDNFLNGNMDGILDVLIEAD 347 >gi|170746587|ref|YP_001752847.1| peptide chain release factor 1 [Methylobacterium radiotolerans JCM 2831] gi|226739115|sp|B1M766|RF1_METRJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|170653109|gb|ACB22164.1| peptide chain release factor 1 [Methylobacterium radiotolerans JCM 2831] Length = 361 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 108/349 (30%), Positives = 175/349 (50%), Gaps = 15/349 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + R + + + + L RE LD ++ I+ + L + + L Sbjct: 9 LDAILARHDIVTAQLASGEI--DPETVVQLSRELSDLDPVVAAIRAYRAALENLAGVEAL 66 Query: 76 ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E ++ + + + Q L AD A LEV AG GG E+ Sbjct: 67 IDEPGTDPEMRALAAEEKPEALAALETAHRALQLLLLPKDAADEKSAILEVRAGTGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY ++AE + ++ E + +G G + +KG + LK E G HR+ Sbjct: 127 ALFAGDLFRMYAKYAESKGWRVEVISESEGTVGGFREVVAEVKGRGVFARLKFESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + ++I ++++D +IDT RA GAGGQHVN T+SA+ Sbjct: 187 QRVPDTETQGRIHTSAATVAVLP-EAEEVDIHVNDADLKIDTMRAQGAGGQHVNKTESAI 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+VV Q+ERSQHKN+A+A +LRA+LY E ++ + + K ++G G Sbjct: 246 RITHLPTGIVVFVQEERSQHKNRARAMALLRARLY--EAERNAKDSARAADRKAQVGSGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIKK 355 +IR+Y P V D R N+ +V+ G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQGRVTDHRINLTLYKLEEVMAGTALDEVVDALITEHQ 351 >gi|326692970|ref|ZP_08229975.1| peptide chain release factor 1 [Leuconostoc argentinum KCTC 3773] Length = 357 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 100/344 (29%), Positives = 173/344 (50%), Gaps = 8/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 V R LN + DP + + + L +E + + Q + + EL Sbjct: 8 LQTVVDRYDELNEQLADPEVASDGQKYMALSKEAGEMRETVEVYTRYQQVIQEIQEAEEL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E +L+ K ++E + + L D + +E+ GG ES +A Sbjct: 68 LDDAEMAPLAKEDLADLKPEKAQLEDQLKILMLPKDPNDDKNIIMEIRGAVGGDESSLFA 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LL MY R+AEK+++ ++ E G K ++I G N Y LK E G HR+ R+ Sbjct: 128 ADLLDMYRRYAEKQRWTLSIIDESMTEVGGYKEVAVMITGDNVYSKLKFESGAHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS +++ V P +D I+ E++ESD + +R+ GAGGQ+VN +AVR+ H Sbjct: 188 STETQGRVHTSTATVGVMPEFED-IDFELAESDLEEEFFRSGGAGGQNVNKVSTAVRLVH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 PTG++V+ Q+ER+Q KN+ +A +L +++Y+ Q+ E A E K+ +G G + Sbjct: 247 KPTGIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNE--AAYAEQRKSAVGTGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R + V++G+L + + A + + Sbjct: 305 IRTYNY-PQNRVTDHRIGLTLNKLDRVMNGELGEVIDALIIADQ 347 >gi|300117843|ref|ZP_07055610.1| peptide chain release factor 1 [Bacillus cereus SJ1] gi|298724707|gb|EFI65382.1| peptide chain release factor 1 [Bacillus cereus SJ1] Length = 358 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 117/347 (33%), Positives = 180/347 (51%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72 R LN DP + + + + +E+ + + +E +D +L D + Sbjct: 8 LQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQLKDAKAM 67 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LE L+ D +++E L+ + + + + + D + +EV AGG E+ Sbjct: 68 LEDKLDADMREMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAGGDEAA 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AE + +KTE +E E G K +I G A+ LK E G HR+ Sbjct: 128 LFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + +EI+I E D R+DT+ +SG GGQ VNTT SAVR Sbjct: 188 RVPETESGGRIHTSTATVAVLP-EAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTMSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K +G G Sbjct: 247 LTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LDDF+ A + + Sbjct: 305 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350 >gi|262068281|ref|ZP_06027893.1| peptide chain release factor 1 [Fusobacterium periodonticum ATCC 33693] gi|291378019|gb|EFE85537.1| peptide chain release factor 1 [Fusobacterium periodonticum ATCC 33693] Length = 357 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 120/351 (34%), Positives = 184/351 (52%), Gaps = 11/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + V R LN P + + + + + + KE + + D Sbjct: 1 MFDKLEEVVARYEELNQILVSPEVLADSKKMIECNKAINEITEIVEKYKEYKKYVDDIEF 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGG 127 + E E D + + ++ L+ + ++ + L + D + +E+ GAGG Sbjct: 61 IKESFKTEKDPDMKEMLNEELKEAEEKLPSLEEELKILLLPKDKNDDKNVIVEIRGGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE+RK+K E +E DGE G+K I G AY LK E GV Sbjct: 121 DEAALFAADLFRMYSRYAERRKWKIEIIEKQDGELNGLKEVAFTIIGLGAYSRLKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +++ R HTS +++ V P V+D E+ + D +IDTYR+ GAGGQHVN TD Sbjct: 181 HRVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVIVDPKDLKIDTYRSGGAGGQHVNMTD 240 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VVQCQ ERSQ KN+ +A L KLYE+E +K+ + ++G Sbjct: 241 SAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQRSEVE--SERRLQVG 298 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P + D R + LDGD+D+ + A + + Sbjct: 299 TGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQ 348 >gi|47570471|ref|ZP_00241104.1| peptide chain release factor 1 [Bacillus cereus G9241] gi|228988555|ref|ZP_04148642.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229158891|ref|ZP_04286948.1| Peptide chain release factor 1 [Bacillus cereus ATCC 4342] gi|47552867|gb|EAL11285.1| peptide chain release factor 1 [Bacillus cereus G9241] gi|228624502|gb|EEK81272.1| Peptide chain release factor 1 [Bacillus cereus ATCC 4342] gi|228771172|gb|EEM19651.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 358 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 116/347 (33%), Positives = 180/347 (51%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72 R LN DP + + + + +E+ + + +E +D +L D + Sbjct: 8 LQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQETVEVYREYKDVREQLKDAKAM 67 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LE L+ + +++E L+ + + + + + D + +EV AGG E+ Sbjct: 68 LEDKLDAEMREMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAGGDEAA 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AE + +KTE +E E G K +I G A+ LK E G HR+ Sbjct: 128 LFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + +EI+I E D R+DT+ +SG GGQ VNTT SAVR Sbjct: 188 RVPETESGGRIHTSTATVAVLP-EAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTMSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K +G G Sbjct: 247 LTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LDDF+ A + + Sbjct: 305 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350 >gi|163784022|ref|ZP_02178981.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1] gi|159880707|gb|EDP74252.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1] Length = 359 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 121/344 (35%), Positives = 182/344 (52%), Gaps = 10/344 (2%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLILLE 74 +L + K P + N + + L +E +HL + + + + LL Sbjct: 11 ELEAKLKEVEEKLASPEVANNPKQLQELAKEHKHLAYVVELFNRYENIEKSIKETKELLH 70 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 EE +E + + + Q + D + LE+ GAGG E+ +A Sbjct: 71 SQDEEMRLLAEEELENLKSQKEKLESEIQIALIPKDPNDDKNVILEIRQGAGGDEAALFA 130 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+AEK +K E L +H+ E GIK LIKG AY LK E GVHR+ R+ Sbjct: 131 AELFRMYQRYAEKNGWKVEILSLHENERGGIKEVIALIKGEGAYSKLKYESGVHRVQRVP 190 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S+ R HTS +++ V P + +++EI+ D +I+T RASGAGGQHVNTTDSAVRITH Sbjct: 191 ETESSGRIHTSTATVAVLP-EAEEVDVEINPDDLKIETMRASGAGGQHVNTTDSAVRITH 249 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV CQ ERSQ +N+A+A +LRA+L + + ++E K+++G G + Sbjct: 250 IPTGIVVSCQDERSQLQNRAKAMQILRARLKDYYDRIQQEKIK--SERKSQVGTGDRSEK 307 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R +++LDG+LD+ + + + Sbjct: 308 IRTYNF-PQNRVTDHRIGYTSHRINEILDGELDEIIDQLILKDQ 350 >gi|289550267|ref|YP_003471171.1| Peptide chain release factor 1 [Staphylococcus lugdunensis HKU09-01] gi|315660273|ref|ZP_07913128.1| peptide chain release factor RF1 [Staphylococcus lugdunensis M23590] gi|289179799|gb|ADC87044.1| Peptide chain release factor 1 [Staphylococcus lugdunensis HKU09-01] gi|315494700|gb|EFU83040.1| peptide chain release factor RF1 [Staphylococcus lugdunensis M23590] Length = 358 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 117/351 (33%), Positives = 186/351 (52%), Gaps = 13/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D +R LN DP + N + + +E+ L + +E +++ + Sbjct: 1 MFDQLDIVEERYEQLNEMLSDPDVVNNADKLRKYSKEQAELQKTVDVYREYKNKKEELSD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKL----EVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + ++ E DD ++ + +K E +F + D D +E+ A AGG Sbjct: 61 IEDMLSETDDKEEIEMLKEESSNLKDALPLLEEKLKFLLIPKDPNDDKDVIVEIRAAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L+RMYT++AE F+TE +E + + G K + + G AY LK E G Sbjct: 121 DEAAIFAGDLMRMYTKYAEANGFRTEVVEATESDHGGYKEVSFQVSGAGAYSKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +EIEI D +IDTYR+SGAGGQHVNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTGV+ E+SQ +N+ +A +L+A+LY+++LQ EE K+ +G Sbjct: 240 SAVRITHIPTGVIATSS-EKSQIQNREKALKVLKARLYDMKLQ--EEQQKYAAQRKSAVG 296 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G ++R+Y P V D R + +++G LD+ + A ++ Sbjct: 297 TGDRSERVRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIIDALTLSEQ 346 >gi|293609440|ref|ZP_06691742.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827892|gb|EFF86255.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|325122703|gb|ADY82226.1| peptide chain release factor 1 [Acinetobacter calcoaceticus PHEA-2] Length = 362 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 113/339 (33%), Positives = 169/339 (49%), Gaps = 7/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + L RE L + + D + Sbjct: 9 LDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLSEITEVWGKYRQAEEDIETAEMM 68 Query: 76 ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + +E + + + + DSN AYLE+ AG GG E+ ++ Sbjct: 69 KSDPDFKDMAEEEIQANKTLLEELESQLNILMIPKDPNDSNAAYLEIRAGTGGDEAAIFS 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+++AE + ++ E L ++GE G K + G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSKYAETQGWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLKFESGAHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P +D +EI+ +D RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 189 ATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG VV+CQ+ERSQHKNKA+A +L ++L + A E + +G G + Sbjct: 249 IPTGTVVECQEERSQHKNKAKAMALLVSRLENAKR--AAADAATSEMRRDLVGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P + D R N+ +++GDL + + + Sbjct: 307 IRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 344 >gi|88810851|ref|ZP_01126108.1| Peptide chain release factor 1 [Nitrococcus mobilis Nb-231] gi|88792481|gb|EAR23591.1| Peptide chain release factor 1 [Nitrococcus mobilis Nb-231] Length = 362 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 116/359 (32%), Positives = 179/359 (49%), Gaps = 18/359 (5%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFI 59 L ++L LG +R + DP + + L +E L + S Sbjct: 5 LRQRLEQLG---------ERYEEIEALLADPTVIGEQKQFTALSQEYARLHPVVQALSKY 55 Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 +E++ L L E E E +++ + Q+ L D +L Sbjct: 56 QEMEQVLTSTRALSEDPDPEIRALAKDEIRAAQLQLEELGQQLQWLMLPQDPDDEKGIFL 115 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 E+ AG GG E+ +A L RMY R+AE+R+++ E + GE G K ++G Y Sbjct: 116 EIRAGTGGDEAALFAGDLFRMYARYAERRRWRLEIINEAPGEHGGYKEIISRVEGAGVYS 175 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 LK E G HR+ R+ +S R HTS ++ V P + EIE + ++ R+DT+RASGAG Sbjct: 176 RLKFESGAHRVQRVPTTESQGRIHTSACTVAVLPEPEQIEEIETATAELRVDTFRASGAG 235 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQHVN TDSA+RITH+PTG+VV+CQ ERSQHKN+A+A +L+AKL E + Sbjct: 236 GQHVNKTDSAIRITHLPTGLVVECQDERSQHKNRAKAMGLLQAKLTARER--ERQQQEQS 293 Query: 300 ESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + ++ +G G +IR+Y P V + R + ++L+GDLD + ++ + Sbjct: 294 ATRRSLVGSGDRSERIRTYNF-PQSRVTEHRVGLTLYKLDEILEGDLDPIIDPLISSHR 351 >gi|84686944|ref|ZP_01014828.1| peptide chain release factor 1 [Maritimibacter alkaliphilus HTCC2654] gi|84665141|gb|EAQ11621.1| peptide chain release factor 1 [Rhodobacterales bacterium HTCC2654] Length = 351 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 117/344 (34%), Positives = 175/344 (50%), Gaps = 12/344 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D QR FL K L + E + RE L + I + L D + Sbjct: 7 LDAITQRFQFLEAKMSQ-GLSGD--EIAEVGREYAELKPVVEEIAAFRQLLSDIEDAEAM 63 Query: 76 ALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + ++ +R+ + + + L AD+ A +E+ G GG E+ +A Sbjct: 64 LSDPEMRELAEDELPGLRERLPVMEQAMRVALLPRDAADARPAMVEIRPGTGGDEASLFA 123 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE R +K + LE E G+K + G + LK E GVHR+ R+ Sbjct: 124 GDLLRMYQRYAEARGWKFDTLEQSLTEVGGVKEVVARVSGDGVFARLKFESGVHRVQRVP 183 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P + ++I I +D RIDT RASGAGGQHVNTTDSAVRITH Sbjct: 184 ETESGGRIHTSAATVAVLP-EAEDVDIHIDPADIRIDTMRASGAGGQHVNTTDSAVRITH 242 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV E+SQH+N+ A +L+ +L++ E Q+ + K ++G G + Sbjct: 243 IPTGIVVTSS-EKSQHRNREIAMQVLKTRLFDAERQR--AHDERASARKAQVGSGDRSER 299 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ DV+ GDLD+ + A + + Sbjct: 300 IRTYNF-PQGRMTDHRINLTLYKLGDVMQGDLDEVIDALIEADQ 342 >gi|258453172|ref|ZP_05701163.1| peptide chain release factor 1 [Staphylococcus aureus A5948] gi|257859118|gb|EEV81975.1| peptide chain release factor 1 [Staphylococcus aureus A5948] Length = 358 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 114/351 (32%), Positives = 185/351 (52%), Gaps = 13/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D +R LN DP + + + + +E+ L + + + + + Sbjct: 1 MFDQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKGKKEELAD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 + E+ E DD ++ + IK E+ + + D D +E+ A AGG Sbjct: 61 IEEMLSETDDKEEVEMLKEESNGIKAELPNLEEELKILLIPKDPNDDKDVIVEIRAAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L+RMY+++AE + FKTE +E + + G K + + G AY LK E G Sbjct: 121 DEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +EIEI D +IDTYR+SGAGGQHVNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTGV+ E+SQ +N+ +A +L+A+LY++++Q EE K+ +G Sbjct: 240 SAVRITHLPTGVIATSS-EKSQIQNREKAMKVLKARLYDMKVQ--EEQQKYASQRKSAVG 296 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++G L++ + A ++ Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGHLEEIIDALTLSEQ 346 >gi|222624780|gb|EEE58912.1| hypothetical protein OsJ_10554 [Oryza sativa Japonica Group] Length = 356 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 145/351 (41%), Positives = 203/351 (57%), Gaps = 35/351 (9%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +++ + + W ++R L+ E P LW + + A + RE L I + + Sbjct: 33 VAQSVKLIKKRLKWGWILERSRQLSVVLERPDLWDDPVFAGKVSREHGELMGKIKSVNQF 92 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L +++ +L LA EED + E V Sbjct: 93 EQELMEHIDMLRLAREED--------------------DNELE--------------TVQ 118 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTES DWA M++ MY+ WA++R + +E GE AGIK AT+ + G A+G+ K Sbjct: 119 AGAGGTESMDWAAMVMNMYSSWAQRRGYTVSIIEEMPGEIAGIKRATIKVDGEYAFGYAK 178 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241 E GVHRLVRISP+DS RRHTSF+++ V P+ D S +I +SD RI+ +R+ G GGQ Sbjct: 179 AEVGVHRLVRISPFDSGKRRHTSFAAVAVVPILGDGSTRYQIKDSDLRIERFRSGGPGGQ 238 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H N T+SAVRI HIPTG+ CQ ERSQH NKA A +L+++L +LE+ ++ ++ Sbjct: 239 HANCTESAVRIVHIPTGITATCQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNADHTQ 298 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 S +EI WG QIRSYVL PY+MVKDLRTN E + P VL+GDLDDF+ L+ Sbjct: 299 SLSEISWGNQIRSYVLHPYRMVKDLRTNYEVSDPDSVLNGDLDDFILNFLS 349 >gi|169795523|ref|YP_001713316.1| peptide chain release factor 1 [Acinetobacter baumannii AYE] gi|213158536|ref|YP_002319834.1| peptide chain release factor 1 [Acinetobacter baumannii AB0057] gi|215483010|ref|YP_002325215.1| peptide chain release factor 1 [Acinetobacter baumannii AB307-0294] gi|332850713|ref|ZP_08432960.1| peptide chain release factor 1 [Acinetobacter baumannii 6013150] gi|332866986|ref|ZP_08437303.1| peptide chain release factor 1 [Acinetobacter baumannii 6013113] gi|226739095|sp|B7H0L9|RF1_ACIB3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|226739096|sp|B7IBA1|RF1_ACIB5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238688120|sp|B0V7E0|RF1_ACIBY RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|169148450|emb|CAM86316.1| peptide chain release factor 1 [Acinetobacter baumannii AYE] gi|213057696|gb|ACJ42598.1| peptide chain release factor 1 [Acinetobacter baumannii AB0057] gi|213989032|gb|ACJ59331.1| peptide chain release factor 1 [Acinetobacter baumannii AB307-0294] gi|332730550|gb|EGJ61866.1| peptide chain release factor 1 [Acinetobacter baumannii 6013150] gi|332734315|gb|EGJ65443.1| peptide chain release factor 1 [Acinetobacter baumannii 6013113] Length = 362 Score = 223 bits (567), Expect = 4e-56, Method: Composition-based stats. Identities = 113/339 (33%), Positives = 169/339 (49%), Gaps = 7/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + L RE L + + D + Sbjct: 9 LDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLTEITEVWGKYRQAEEDIETAEMM 68 Query: 76 ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + +E + + + + DSN AYLE+ AG GG E+ ++ Sbjct: 69 KSDPDFKDMAEEEIQANKVLLEELESQLNILMIPKDPNDSNAAYLEIRAGTGGDEAAIFS 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+++AE + ++ E L ++GE G K + G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSKYAESQGWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLKFESGAHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P +D +EI+ +D RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 189 ATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG VV+CQ+ERSQHKNKA+A +L ++L + A E + +G G + Sbjct: 249 IPTGTVVECQEERSQHKNKAKAMALLVSRLENAKR--AAADAATSEMRRDLVGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P + D R N+ +++GDL + + + Sbjct: 307 IRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 344 >gi|260549389|ref|ZP_05823608.1| peptide chain release factor 1 [Acinetobacter sp. RUH2624] gi|260407498|gb|EEX00972.1| peptide chain release factor 1 [Acinetobacter sp. RUH2624] Length = 362 Score = 223 bits (567), Expect = 5e-56, Method: Composition-based stats. Identities = 113/339 (33%), Positives = 169/339 (49%), Gaps = 7/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + L RE L + + D + Sbjct: 9 LDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLTEITEVWGKYRQAEEDIETAEMM 68 Query: 76 ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + +E + + + + DSN AYLE+ AG GG E+ ++ Sbjct: 69 KSDPDFKDMAEEEIQANKALLEELESQLNILMIPKDPNDSNAAYLEIRAGTGGDEAAIFS 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+++AE + ++ E L ++GE G K + G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSKYAETQGWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLKFESGAHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P +D +EI+ +D RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 189 ATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG VV+CQ+ERSQHKNKA+A +L ++L + A E + +G G + Sbjct: 249 IPTGTVVECQEERSQHKNKAKAMALLVSRLENAKR--AAADAATSEMRRDLVGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P + D R N+ +++GDL + + + Sbjct: 307 IRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 344 >gi|257462414|ref|ZP_05626828.1| peptide chain release factor 1 [Fusobacterium sp. D12] gi|317060078|ref|ZP_07924563.1| peptide chain release factor 1 [Fusobacterium sp. D12] gi|313685754|gb|EFS22589.1| peptide chain release factor 1 [Fusobacterium sp. D12] Length = 359 Score = 223 bits (567), Expect = 5e-56, Method: Composition-based stats. Identities = 122/352 (34%), Positives = 182/352 (51%), Gaps = 12/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + V R L+T P + + + + L I KE + + Sbjct: 1 MFDKLEEVVARYEELHTLLSSPEVLNDPKKMIECNKNLNALTPLIEKYKEYKAVKEEVDF 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127 + E E D + + L+ + ++ + E D N+ +E+ GAGG Sbjct: 61 IKESLKTEKDEDMRVMMQEELKENEDKMPELEKELKILLLPKDPNDDNNVIVEIRGGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNAYGWLKGEQG 186 E+ +A L RMY R+AE++K+K E +E D E G+K I+G AY LK E G Sbjct: 121 DEAAIFAGDLFRMYCRYAERKKWKVEIIEKQDLEGLDGLKEVAFSIQGFGAYSKLKFESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S R HTS +++ V P V+D E++I D +IDTYR+ GAGGQHVN T Sbjct: 181 VHRVQRVPKTESAGRIHTSTATVAVLPEVEDITEVQIDPKDLKIDTYRSGGAGGQHVNMT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PTGV+VQCQ ERSQ KN+ +A L +KL E+E++K+ + ++ Sbjct: 241 DSAVRITHLPTGVIVQCQDERSQLKNREKAMKHLASKLLEMEIEKQRSEIEG--ERRLQV 298 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P + D R + LDGDLD+ + A + + Sbjct: 299 GTGDRAEKIRTYNF-PQGRITDHRIKLTVHQLEAFLDGDLDEMIDALITFSQ 349 >gi|223938118|ref|ZP_03630015.1| peptide chain release factor 1 [bacterium Ellin514] gi|223893162|gb|EEF59626.1| peptide chain release factor 1 [bacterium Ellin514] Length = 359 Score = 223 bits (567), Expect = 5e-56, Method: Composition-based stats. Identities = 111/343 (32%), Positives = 168/343 (48%), Gaps = 12/343 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +R S + DP ++N + L +E L ++ + D L Sbjct: 7 IDKFARRFSEVEASLSDPKAFENAQRFQELSKEYSRLKGLVAGGSAYLKAVADLEENKTL 66 Query: 76 ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E S + + K Q L DS + +E+ AGAGG+ES Sbjct: 67 LAAEPADSEMALMAKEEVTRLEEVVKKLGLEVQAGVLPPDPTDSRNTIVEIRAGAGGSES 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMYTR+AE + +K E+++ + G K I G + Y LK E GVHR+ Sbjct: 127 ALFAADLYRMYTRYAESQGWKVESIDASPSDLGGFKEVIFGITGSDVYKRLKYESGVHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS ++ V P + ++I+I D +D RASG GGQ VNTTDSAV Sbjct: 187 QRVPATEAQGRIHTSTCTVAVLP-EAEEVDIDIRPEDLSVDRCRASGKGGQGVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+ HIP+G++V C ERSQHKNKA+A +LR++L LE + +E A K ++G G Sbjct: 246 RLHHIPSGLIVYCADERSQHKNKAKAMTVLRSRL--LEKKIADENAKYAAQRKEQVGTGE 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R + + ++G++D ++ Sbjct: 304 RNERIRTYNF-PQNRVTDHRIEVTLYNLPTFVEGEIDSIIEPL 345 >gi|291288202|ref|YP_003505018.1| peptide chain release factor 1 [Denitrovibrio acetiphilus DSM 12809] gi|290885362|gb|ADD69062.1| peptide chain release factor 1 [Denitrovibrio acetiphilus DSM 12809] Length = 356 Score = 223 bits (567), Expect = 5e-56, Method: Composition-based stats. Identities = 120/351 (34%), Positives = 185/351 (52%), Gaps = 13/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D ++ L K DP L ++ + + +E L + +E Sbjct: 1 MFDKLDEVRKKYYELTDKLVDPELMKDNMAFQKTAKEHAELKPVVERYEEYLAEKEAVDE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127 + DD +++ L+ K ++ + E D + +LE+ AG GG Sbjct: 61 AHSIIKTSDDKDLVELAEMELEEKKGVLDELEDELKKSLLTKDPYDDKNIFLEIRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A LL+MYT++AE +K E ++ ++ G K L+KG AY LK E G Sbjct: 121 DEASLFAGDLLKMYTKYAEMNGWKVEVVDFNETGVGGYKEVVALVKGHGAYSKLKFEAGG 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P + +++ I + D RID +RASGAGGQHVNTTD Sbjct: 181 HRVQRVPETESGGRIHTSACTVAVLP-EAEDVDVHIEQKDLRIDVFRASGAGGQHVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTGVVV CQ ERSQ KN+ +A +L++K+ E E+QK++ + S K ++G Sbjct: 240 SAVRMTHIPTGVVVSCQDERSQIKNREKAMKLLKSKILEAEIQKKQ--SAEAASRKLQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R E + L G+++D + AT+A + Sbjct: 298 SGDRSERIRTYNF-PQNRVTDHRIK-ESANLDRFLLGEMEDMIDATIAFDQ 346 >gi|262375291|ref|ZP_06068524.1| peptide chain release factor 1 [Acinetobacter lwoffii SH145] gi|262309545|gb|EEY90675.1| peptide chain release factor 1 [Acinetobacter lwoffii SH145] Length = 362 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 117/339 (34%), Positives = 171/339 (50%), Gaps = 7/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + L RE L + + + D + Sbjct: 9 LDQLSDRHEELTALLADVEVISDNKRFRQLSREHNDLTEITNVWTKYRQAEEDIETAQAM 68 Query: 76 ALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + QE + I+ + D+N AYLE+ AG GG E+ ++ Sbjct: 69 LSDPDFKEMAQEEIKENKALIESLEADLNILMIPKDPNDANSAYLEIRAGTGGDEAAIFS 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+++AE + ++ E L ++GE G K LI G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSKYAENQGWRIEILSENEGEHGGYKEVICLINGDGVYGRLKFESGAHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P +D ++I+ +D RIDTYRASGAGGQHVN TDSAVRITH Sbjct: 189 ATESQGRVHTSACTVAILPEIDVDTSVDINPADLRIDTYRASGAGGQHVNKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG VV+CQ+ERSQHKNKA+A +L ++L + A E + +G G + Sbjct: 249 IPTGTVVECQEERSQHKNKAKAMALLVSRLENAKR--AAADAATSEMRRDLVGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P + D R N+ V++GDL + + + Sbjct: 307 IRTYNY-PQGRMTDHRINLTLYKLDAVMEGDLTELLDSL 344 >gi|310644400|ref|YP_003949159.1| peptide chain release factor 1 [Paenibacillus polymyxa SC2] gi|309249351|gb|ADO58918.1| Peptide chain release factor 1 [Paenibacillus polymyxa SC2] Length = 355 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 104/351 (29%), Positives = 177/351 (50%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + R L+ DP + + + + +E+ L A E + + + Sbjct: 1 MLDRLQSLADRYDKLSELLCDPDVANDSKKLRDYSKEQSDLQPAYEAYTEYKTVVEELDA 60 Query: 72 LLELALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + E+ D + + ++ R + E + L D + +E+ AGG Sbjct: 61 AKAMQAEKLDDEMREMVKMEIEELSARKRELDEKIRILLLPKDPNDDKNVIIEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR+A+ + ++ E ++ + + G K +I G AY +K E G Sbjct: 121 DEAALFAADLYRMYTRYADTQGWRVELMDANMNDLGGFKEVIFMINGRGAYSKMKFESGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +S R HTS S++ V P + ++IEI + D R+DT+ +SGAGGQ VNTT Sbjct: 181 HRVQRIPTTESGGRIHTSTSTVSVMP-EAEEVDIEILDKDIRVDTFCSSGAGGQSVNTTK 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+V CQ +SQ+ NK +A +LRA++ ++ Q EE A K+++G Sbjct: 240 SAVRVTHMPTGIVATCQDGKSQNSNKEKALQVLRARISDMMRQ--EEEAKYAGERKSKVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + V++G++++ + A ++ Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTMHKLDQVMNGEIEEIVSALTIAEQ 347 >gi|127513840|ref|YP_001095037.1| peptide chain release factor 1 [Shewanella loihica PV-4] gi|166223603|sp|A3QH30|RF1_SHELP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|126639135|gb|ABO24778.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella loihica PV-4] Length = 361 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 111/346 (32%), Positives = 181/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R + D + + + L +E L++ + K + D E+ Sbjct: 9 LEGLLERNEEVLALLSDAEIIADQERFRALSKEYSQLEDVVKSFKAYRQAEEDLASAQEM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + + Q L D N+A+LE+ AGAGG E+ Sbjct: 69 LAEDDADLKEMAQEEIKEAKATLDVLEGELQILLLPKDPKDDNNAFLEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+ E +++ E + ++GE G K + + G YG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYCEANRWQMEIMNANEGEHGGFKEIIVKVSGDGVYGKLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P + ++ IEI+ +D ++DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRVHTSACTVVVMPEIPEAEAIEINPADLKVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIP+G+VV+CQ +RSQHKN+AQA ++L A++ +E +KR + + + G Sbjct: 249 THIPSGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSEEE--STRRNLVASGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 ++R+Y P V + R N+ S+V++GDLD + + + Sbjct: 307 ERVRTYNF-PQGRVSEHRINLTLYRLSEVMEGDLDAILGPLMQENQ 351 >gi|169633250|ref|YP_001706986.1| peptide chain release factor 1 [Acinetobacter baumannii SDF] gi|184158674|ref|YP_001847013.1| peptide chain release factor 1 [Acinetobacter baumannii ACICU] gi|239501457|ref|ZP_04660767.1| peptide chain release factor 1 [Acinetobacter baumannii AB900] gi|260554585|ref|ZP_05826806.1| peptide chain release factor 1 [Acinetobacter baumannii ATCC 19606] gi|332874369|ref|ZP_08442280.1| peptide chain release factor 1 [Acinetobacter baumannii 6014059] gi|238685536|sp|A3M6N7|RF1_ACIBT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238688133|sp|B0VM26|RF1_ACIBS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238690970|sp|B2HU82|RF1_ACIBC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|169152042|emb|CAP00926.1| peptide chain release factor 1 [Acinetobacter baumannii] gi|183210268|gb|ACC57666.1| Protein chain release factor A [Acinetobacter baumannii ACICU] gi|193077723|gb|ABO12581.2| peptide chain release factor 1 [Acinetobacter baumannii ATCC 17978] gi|260411127|gb|EEX04424.1| peptide chain release factor 1 [Acinetobacter baumannii ATCC 19606] gi|322507515|gb|ADX02969.1| prfA [Acinetobacter baumannii 1656-2] gi|323518589|gb|ADX92970.1| peptide chain release factor 1 [Acinetobacter baumannii TCDC-AB0715] gi|332737448|gb|EGJ68364.1| peptide chain release factor 1 [Acinetobacter baumannii 6014059] Length = 362 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 113/339 (33%), Positives = 169/339 (49%), Gaps = 7/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + L RE L + + D + Sbjct: 9 LDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLTEITEVWGKYRQAEEDIETAEMM 68 Query: 76 ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + +E + + + + DSN AYLE+ AG GG E+ ++ Sbjct: 69 KSDPDFKDMAEEEIQANKALLEELESQLNILMIPKDPNDSNAAYLEIRAGTGGDEAAIFS 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+++AE + ++ E L ++GE G K + G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSKYAESQGWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLKFESGAHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P +D +EI+ +D RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 189 ATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG VV+CQ+ERSQHKNKA+A +L ++L + A E + +G G + Sbjct: 249 IPTGTVVECQEERSQHKNKAKAMALLVSRLENAKR--AAADAATSEMRRDLVGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P + D R N+ +++GDL + + + Sbjct: 307 IRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 344 >gi|323492377|ref|ZP_08097530.1| peptide chain release factor 1 [Vibrio brasiliensis LMG 20546] gi|323313424|gb|EGA66535.1| peptide chain release factor 1 [Vibrio brasiliensis LMG 20546] Length = 362 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 113/346 (32%), Positives = 182/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R + DP + N + + L +E L+ + Q D + E+ Sbjct: 9 LETLVERYEEVQHLLGDPDVIGNQDKFRALSKEYSQLEEVTKCFQAYQQAQEDLVAAEEM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 A E+D+ + + + Q L D + +LE+ AGAGG E+ Sbjct: 69 ANEDDEEMREMAQEEIKEAKEAIERLSDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AEK+ ++ E + ++ E G K + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSKFAEKKGWRVEVMSSNESEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RI Sbjct: 189 VPATESQGRVHTSACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311 TH+PTG VV+CQ ERSQHKNKA+A +L A++ ++ ++ + A ++ + +G G + Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARI--IQAEEAKRAAEESDTRRNLLGSGDRS 306 Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ ++V++GD+ + + + Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTIYRLNEVMEGDVASLIDPVIQEHQ 351 >gi|70725918|ref|YP_252832.1| peptide chain release factor 1 [Staphylococcus haemolyticus JCSC1435] gi|119361616|sp|Q4L7Z9|RF1_STAHJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|68446642|dbj|BAE04226.1| peptide chain release factor 1 [Staphylococcus haemolyticus JCSC1435] Length = 358 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 114/351 (32%), Positives = 186/351 (52%), Gaps = 13/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D +R LN DP + + + + +E+ L + ++ + + + Sbjct: 1 MFDQLDIVEERYEQLNEMLSDPEIVNDSDKLRKYSKEQADLQKTVDVYRDYKSKKEEIAE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 + E+ E +D ++ + +K + + F + D D +E+ A AGG Sbjct: 61 IDEMLNETEDKEEIEMLKEESASLKSAIPELEEQLKFLLIPKDPNDEKDVIVEIRAAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A LLRMY+++AE + FKTE +E + + G K + + G AY LK E G Sbjct: 121 DEAAIFAGDLLRMYSKYAESQNFKTEIVEAAESDHGGYKEISFSVSGSGAYSKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +EIEI D +IDTYR+SGAGGQHVNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTGV+ E+SQ +N+ +A +L+A+LY+++LQ EE K+ +G Sbjct: 240 SAVRITHLPTGVIATSS-EKSQIQNREKALKVLKARLYDMKLQ--EEQQKYAAQRKSAVG 296 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G ++R+Y P V D R + +++G LD+ + A ++ Sbjct: 297 TGDRSERVRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIIDALTLSEQ 346 >gi|303235160|ref|ZP_07321780.1| peptide chain release factor 2 [Finegoldia magna BVS033A4] gi|302493752|gb|EFL53538.1| peptide chain release factor 2 [Finegoldia magna BVS033A4] Length = 329 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 155/326 (47%), Positives = 220/326 (67%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 +T W + +A+ + E + + + EI++++ + ++LE++ E++ + Sbjct: 2 QQETMKAGFWDDSDKAQEIFDELNSVKDDVENYDEIEEKIEEVKMMLEISKEDNTEEYEK 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E S L+ ++ V+ + ++LL GE D N+A + +HAGAGGTE+QDWA MLLRMYTRW Sbjct: 62 EISKTLKNLEKNVDEFKIKTLLVGEYDRNNAIMSIHAGAGGTEAQDWAEMLLRMYTRWIA 121 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 +K+ + + + E GIKS +L+++G NAYG+LK E+GVHRLVRISP+D RRHTSF Sbjct: 122 DKKYSYKITDYNQDTEGGIKSVSLIVQGINAYGFLKSEKGVHRLVRISPFDQQKRRHTSF 181 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S+ V+P + D+ +I+I + D +IDTYRASGAGGQHVN TDSAVRITHIPTGV VQCQ E Sbjct: 182 ASVDVFPEIKDNHDIQIDDKDLKIDTYRASGAGGQHVNMTDSAVRITHIPTGVTVQCQTE 241 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQ N+ A +ML AKL ++ +++ E + +I WG QIRSYV QPY +VKD Sbjct: 242 RSQIANRKYAMDMLIAKLIMIKEEEKREKIEDIQGKYNQIAWGSQIRSYVFQPYTLVKDH 301 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLA 352 RTN E + DVLDGDLD F+ A L+ Sbjct: 302 RTNCESSQVQDVLDGDLDKFINAYLS 327 >gi|222053788|ref|YP_002536150.1| peptide chain release factor 1 [Geobacter sp. FRC-32] gi|221563077|gb|ACM19049.1| peptide chain release factor 1 [Geobacter sp. FRC-32] Length = 356 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 108/348 (31%), Positives = 175/348 (50%), Gaps = 9/348 (2%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 LFD + +R L DP + N E + L RE L + + + + + Sbjct: 2 LFDKIEELERRYQELEALLSDPVVLGNQPEFRKLSREHFDLSALVQAYRNYKRIISEIEG 61 Query: 72 LLELALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 EL + + + E ++ + L D LE+ AG GG E+ Sbjct: 62 NRELLADPEMKEMAEAELESLEKQRDALESEIKLLLLPKDPNDDKSVILEIRAGTGGDEA 121 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY+R+AE +++ E + + E+ G K ++G + LK E G HR+ Sbjct: 122 ALFAGDLFRMYSRFAETNRWRVEVISSSESEKGGFKEVVASVEGEGVFAKLKYESGTHRV 181 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS ++ + P + ++I+I+ +D +ID YR+SGAGGQHVNTTDSAV Sbjct: 182 QRVPETEAQGRIHTSACTVAIMP-EAEDVDIDINPTDLKIDVYRSSGAGGQHVNTTDSAV 240 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG VV CQ+ERSQ KN+A+A +L+ ++ + LQ++ A + K ++G G Sbjct: 241 RITHLPTGTVVACQEERSQIKNRAKAMKVLKTRILDNILQEQN--AKLAADRKQQVGSGD 298 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + ++ GD+ + A A + Sbjct: 299 RSERIRTYNF-PQGRMTDHRIGLTLYRLDAIMAGDIAEIADALRAHYQ 345 >gi|49188164|ref|YP_031417.1| peptide chain release factor 1 [Bacillus anthracis str. Sterne] gi|49480414|ref|YP_039322.1| peptide chain release factor 1 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52140231|ref|YP_086598.1| peptide chain release factor 1 [Bacillus cereus E33L] gi|118480364|ref|YP_897515.1| peptide chain release factor 1 [Bacillus thuringiensis str. Al Hakam] gi|165871326|ref|ZP_02215975.1| peptide chain release factor 1 [Bacillus anthracis str. A0488] gi|167636684|ref|ZP_02394972.1| peptide chain release factor 1 [Bacillus anthracis str. A0442] gi|170688145|ref|ZP_02879356.1| peptide chain release factor 1 [Bacillus anthracis str. A0465] gi|170709368|ref|ZP_02899781.1| peptide chain release factor 1 [Bacillus anthracis str. A0389] gi|177651841|ref|ZP_02934424.1| peptide chain release factor 1 [Bacillus anthracis str. A0174] gi|217962818|ref|YP_002341396.1| peptide chain release factor 1 [Bacillus cereus AH187] gi|218906507|ref|YP_002454341.1| peptide chain release factor 1 [Bacillus cereus AH820] gi|225867310|ref|YP_002752688.1| peptide chain release factor 1 [Bacillus cereus 03BB102] gi|227818092|ref|YP_002818101.1| peptide chain release factor 1 [Bacillus anthracis str. CDC 684] gi|228917938|ref|ZP_04081474.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228930337|ref|ZP_04093341.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228936614|ref|ZP_04099408.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228949050|ref|ZP_04111322.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229094441|ref|ZP_04225513.1| Peptide chain release factor 1 [Bacillus cereus Rock3-42] gi|229124833|ref|ZP_04254011.1| Peptide chain release factor 1 [Bacillus cereus 95/8201] gi|229142072|ref|ZP_04270597.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST26] gi|229187555|ref|ZP_04314695.1| Peptide chain release factor 1 [Bacillus cereus BGSC 6E1] gi|229199455|ref|ZP_04326118.1| Peptide chain release factor 1 [Bacillus cereus m1293] gi|229601300|ref|YP_002869544.1| peptide chain release factor 1 [Bacillus anthracis str. A0248] gi|254686248|ref|ZP_05150107.1| peptide chain release factor 1 [Bacillus anthracis str. CNEVA-9066] gi|254724243|ref|ZP_05186027.1| peptide chain release factor 1 [Bacillus anthracis str. A1055] gi|254735257|ref|ZP_05192966.1| peptide chain release factor 1 [Bacillus anthracis str. Western North America USA6153] gi|254744460|ref|ZP_05202140.1| peptide chain release factor 1 [Bacillus anthracis str. Kruger B] gi|254755798|ref|ZP_05207830.1| peptide chain release factor 1 [Bacillus anthracis str. Vollum] gi|254762138|ref|ZP_05213984.1| peptide chain release factor 1 [Bacillus anthracis str. Australia 94] gi|301056797|ref|YP_003795008.1| peptide chain release factor 1 [Bacillus anthracis CI] gi|49182091|gb|AAT57467.1| peptide chain release factor 1 [Bacillus anthracis str. Sterne] gi|49331970|gb|AAT62616.1| peptide chain release factor 1 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51973700|gb|AAU15250.1| peptide chain release factor 1 [Bacillus cereus E33L] gi|118419589|gb|ABK88008.1| bacterial peptide chain release factor 1 (bRF-1) [Bacillus thuringiensis str. Al Hakam] gi|164712993|gb|EDR18521.1| peptide chain release factor 1 [Bacillus anthracis str. A0488] gi|167527884|gb|EDR90706.1| peptide chain release factor 1 [Bacillus anthracis str. A0442] gi|170125716|gb|EDS94630.1| peptide chain release factor 1 [Bacillus anthracis str. A0389] gi|170667838|gb|EDT18590.1| peptide chain release factor 1 [Bacillus anthracis str. A0465] gi|172082545|gb|EDT67609.1| peptide chain release factor 1 [Bacillus anthracis str. A0174] gi|217065190|gb|ACJ79440.1| peptide chain release factor 1 [Bacillus cereus AH187] gi|218537315|gb|ACK89713.1| peptide chain release factor 1 [Bacillus cereus AH820] gi|225787237|gb|ACO27454.1| peptide chain release factor 1 [Bacillus cereus 03BB102] gi|227005978|gb|ACP15721.1| peptide chain release factor 1 [Bacillus anthracis str. CDC 684] gi|228584031|gb|EEK42186.1| Peptide chain release factor 1 [Bacillus cereus m1293] gi|228595922|gb|EEK53602.1| Peptide chain release factor 1 [Bacillus cereus BGSC 6E1] gi|228641361|gb|EEK97667.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST26] gi|228658624|gb|EEL14286.1| Peptide chain release factor 1 [Bacillus cereus 95/8201] gi|228688978|gb|EEL42805.1| Peptide chain release factor 1 [Bacillus cereus Rock3-42] gi|228810623|gb|EEM56972.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228823049|gb|EEM68887.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228829323|gb|EEM74956.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228841735|gb|EEM86846.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229265708|gb|ACQ47345.1| peptide chain release factor 1 [Bacillus anthracis str. A0248] gi|300378966|gb|ADK07870.1| peptide chain release factor 1 [Bacillus cereus biovar anthracis str. CI] gi|324329278|gb|ADY24538.1| peptide chain release factor 1 [Bacillus thuringiensis serovar finitimus YBT-020] Length = 358 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 116/347 (33%), Positives = 180/347 (51%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72 R LN DP + + + + +E+ + + +E +D +L D + Sbjct: 8 LQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQLKDAKAM 67 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LE L+ + +++E L+ + + + + + D + +EV AGG E+ Sbjct: 68 LEDKLDAEMREMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAGGDEAA 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AE + +KTE +E E G K +I G A+ LK E G HR+ Sbjct: 128 LFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + +EI+I E D R+DT+ +SG GGQ VNTT SAVR Sbjct: 188 RVPETESGGRIHTSTATVAVLP-EAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTMSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K +G G Sbjct: 247 LTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LDDF+ A + + Sbjct: 305 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350 >gi|226354826|ref|YP_002784566.1| peptide chain release factor 2 [Deinococcus deserti VCD115] gi|226316816|gb|ACO44812.1| putative Peptide chain release factor 2 (RF-2) [Deinococcus deserti VCD115] Length = 383 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 145/344 (42%), Positives = 207/344 (60%), Gaps = 6/344 (1%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 G FD +RL+ L+ + DP LW + A+ + +E L + + Sbjct: 31 GSTFDIPGKTRRLNELDRELSDPELWNDQSRARQVTQESGTLRRIVESYSSLHSDAQGLN 90 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +LE+A EE+ +++E S + V+ E+L + + A + V GAGGTE+ Sbjct: 91 EMLEIADEEEREMLVEEQSSL----QTRVDELYRETLFTMKHADTAAIVRVKGGAGGTEA 146 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA ML RMY RWAE+R +K + L+ G++AG +S +I+G AYG + E GVHRL Sbjct: 147 QDWAGMLARMYMRWAERRGYKVDILDEQPGDQAGYQSIEFIIRGEKAYGMMAAEHGVHRL 206 Query: 191 VRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 VR+SP+DSN+RR TSF+S+ V P ++ I I I +SD R D +R+ GAGGQ VNTTDSA Sbjct: 207 VRVSPFDSNNRRQTSFASVDVVPEVPEEEINIHIPDSDLRRDVFRSQGAGGQGVNTTDSA 266 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+TH+PTG+ V CQ RSQ KN A +L+ +LY++E++KRE ++ ++ WG Sbjct: 267 VRLTHLPTGIAVACQITRSQIKNAELALQILKQRLYDIEVKKREAEEAAARGAQAKVEWG 326 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 Q+RSYVL +KD RT + K +P DVLDGDLD+ M A L Sbjct: 327 SQMRSYVLDKQ-YIKDHRTGLMKHNPDDVLDGDLDELMWAGLEW 369 >gi|254282871|ref|ZP_04957839.1| peptide chain release factor 1 [gamma proteobacterium NOR51-B] gi|219679074|gb|EED35423.1| peptide chain release factor 1 [gamma proteobacterium NOR51-B] Length = 360 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 116/346 (33%), Positives = 175/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R ++ D + + + + L +E LD + + Q D E+ Sbjct: 9 LEQLRDRHEEVSAMLGDADVISDQNQFRDLSKEFSQLDEVVRVFEAYQRCQSDLSEAREM 68 Query: 76 ALEEDDCSILQETSDNLQRIKL---EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + E Q L DS + YLE+ AG GG E+ Sbjct: 69 LKDSDPEMQSMARDELDAGEPELAAMEEKLQLLLLPRDPRDSQNVYLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY R++E R ++ E + GE G K I+G + Y LK E G HR+ R Sbjct: 129 FAGDLFRMYQRYSESRGWRIEVISERPGEHGGFKEIISRIQGDDIYAHLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ + P D +IEI+++D R+DT+R+SGAGGQHVNTTDSAVRI Sbjct: 189 VPETESQGRIHTSACTVAILPEPDAVEDIEINKADLRVDTFRSSGAGGQHVNTTDSAVRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+P+G+VV+CQ ERSQHKN+A+A ++L+AKL ++ A E + +G G Sbjct: 249 THLPSGIVVECQDERSQHKNRARAMSLLQAKLASASE--QQAAAEQAEERRNLVGTGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +V++GDLD ++ + Sbjct: 307 DRIRTYNF-PQGRVSDHRINLTLYKLDEVIEGDLDALIQPLRREYQ 351 >gi|196229467|ref|ZP_03128332.1| peptide chain release factor 1 [Chthoniobacter flavus Ellin428] gi|196226699|gb|EDY21204.1| peptide chain release factor 1 [Chthoniobacter flavus Ellin428] Length = 360 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 107/346 (30%), Positives = 175/346 (50%), Gaps = 12/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +R L + +L+ + +A+ +RE L ++ + + +L Sbjct: 7 ISKKAERFRELEAEISSSNLYDDPRKARETLREHTRLKELLANWETLNKTRAQLTENQDL 66 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 A ED + + + + ++ + + F L + DA +E+ G GG E+ Sbjct: 67 AKGEDK-EMAEMAAMEIPDLEKRIADTETAVQFALLPPDPNEDRDAIVEIRGGTGGDEAA 125 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYTR+AE FK E LE GE G+K + G + L+ E GVHR+ Sbjct: 126 LFAADLYRMYTRFAETHGFKLEPLEASVGELGGMKEVIFKVTGDQVFRTLRYESGVHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P + +++E+ + RI+ RA G GGQ VNTTDSAV+ Sbjct: 186 RVPATEAQGRIHTSTATVAVLP-EAEEVDLELKADEIRIEVCRAGGPGGQGVNTTDSAVQ 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 + HIPTG +V+CQ RSQ KNK +A +LR++L LE+++REE K +IG G Sbjct: 245 VMHIPTGTIVRCQDGRSQQKNKEKALTILRSRL--LEVKQREEAEKYAAQRKGQIGTGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P V D R N+ + ++G++D+ + + A Sbjct: 303 SEKIRTYNF-PQNRVTDHRINLTLYNLDSFIEGNIDEMIGSLQAAD 347 >gi|302380960|ref|ZP_07269421.1| peptide chain release factor 2 [Finegoldia magna ACS-171-V-Col3] gi|302311181|gb|EFK93201.1| peptide chain release factor 2 [Finegoldia magna ACS-171-V-Col3] Length = 329 Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats. Identities = 155/326 (47%), Positives = 220/326 (67%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 +T W + +A+ + E + + + EI++++ + ++LE++ E++ + Sbjct: 2 QQETMKAGFWDDSDKAQEIFDELNSVKDDVENYDEIEEKIEEVKMMLEISKEDNTEEYEK 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E S L+ ++ V+ + ++LL GE D N+A + +HAGAGGTE+QDWA MLLRMYTRW Sbjct: 62 EISKTLKNLEKNVDEFKIQTLLVGEYDRNNAIMSIHAGAGGTEAQDWAEMLLRMYTRWIA 121 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 +K+ + + + E GIKS +L+++G NAYG+LK E+GVHRLVRISP+D RRHTSF Sbjct: 122 DKKYSYKITDYNQDTEGGIKSVSLIVQGINAYGFLKSEKGVHRLVRISPFDQQKRRHTSF 181 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S+ V+P + D+ +I+I + D +IDTYRASGAGGQHVN TDSAVRITHIPTGV VQCQ E Sbjct: 182 ASVDVFPEIKDNHDIQIDDKDLKIDTYRASGAGGQHVNMTDSAVRITHIPTGVTVQCQTE 241 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQ N+ A +ML AKL ++ +++ E + +I WG QIRSYV QPY +VKD Sbjct: 242 RSQIANRKYAMDMLIAKLIMIKEEEKREKIEDIQGKYNQIAWGSQIRSYVFQPYTLVKDH 301 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLA 352 RTN E + DVLDGDLD F+ A L+ Sbjct: 302 RTNCESSQVQDVLDGDLDKFINAYLS 327 >gi|297172147|gb|ADI23128.1| protein chain release factor A [uncultured gamma proteobacterium HF0770_09E07] Length = 359 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 117/339 (34%), Positives = 190/339 (56%), Gaps = 7/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ ++ L+T+ DP L ++ + L +E + + + Q+ L L Sbjct: 9 LDSIQKKADDLSTQLSDPKLTSDINQLTKLNKEYSEIKDVVENWNRYQELEASIEDLDTL 68 Query: 76 ALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 A +E+ S+ +E N + ++ + L + D ++++E+ AGAGG E+ + Sbjct: 69 AKDEEMKSLALEEKDQNEKELEKIEAEIMIQLLPKDKDDERNSFVELRAGAGGDEAAIFV 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+AE+ K+K E ++ G K + + G + YG LK E GVHR+ R+ Sbjct: 129 GDLYRMYGRFAERSKWKVEKIKEIPSGTGGFKEIVIKVIGADTYGNLKFESGVHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P +DD E ++ S+ R+DTYRASGAGGQHVN TDSAVR+TH Sbjct: 189 LTESQGRIHTSTATVAVLPEIDDIEEKDLDMSEIRVDTYRASGAGGQHVNKTDSAVRLTH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +P+G+VV+CQ +RSQHKNKA+A +L +K+Y++E QK E+ K+ +G G + Sbjct: 249 LPSGIVVECQDDRSQHKNKAKALGLLSSKIYDIEKQKIEQEK--ASERKSLVGTGDRSEK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P + D R + + +DGD+D+ + + Sbjct: 307 IRTYNF-PQGRITDHRLKLTLYNIDSFIDGDIDEMLNSL 344 >gi|330444669|ref|YP_004377655.1| peptide chain release factor 1 [Chlamydophila pecorum E58] gi|328807779|gb|AEB41952.1| peptide chain release factor 1 [Chlamydophila pecorum E58] Length = 363 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 113/350 (32%), Positives = 180/350 (51%), Gaps = 13/350 (3%) Query: 13 LFD---WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---L 66 +FD + RL + + P ++ + E K L +E L ++Q++ L Sbjct: 1 MFDDTKLTEYLSRLEEIEVRLSSPEIFDHPEEYKALSKEHARLSELKEAYAQLQEQEKIL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGA 125 D+ L + + + ++L+E + + + + D + +E+ AG Sbjct: 61 ADDKQALSMEKDPEMIAMLEEGLVEGKAETERLRKVLENLLVPPDPDDDLNVIMELRAGT 120 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ + +RMY ++ + +K E L + + G K + I G +L+ E Sbjct: 121 GGEEAALFVGDCVRMYHLYSAAKGWKYEVLSSSESDLKGYKEYVMGISGTGVKRFLQYEA 180 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G HR+ R+ ++ R HTS ++ + P + EI I E D RIDT+RASGAGGQHVN Sbjct: 181 GTHRVQRVPETETQGRVHTSAITVAILPEPAEDDEIIIDEKDLRIDTFRASGAGGQHVNV 240 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITH+PTGVVV CQ ERSQHKNK +A +L+A++ + E+QKR++ A+ S + Sbjct: 241 TDSAVRITHLPTGVVVTCQDERSQHKNKDKAMRILKARIRDAEMQKRQKEASAMRS--AQ 298 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +G G +IR+Y V D R + S V++GDLD A ++ Sbjct: 299 VGSGDRSERIRTYNFS-QNRVTDHRIGLTLYSLDKVMEGDLDPITTALVS 347 >gi|323698089|ref|ZP_08110001.1| peptide chain release factor 1 [Desulfovibrio sp. ND132] gi|323458021|gb|EGB13886.1| peptide chain release factor 1 [Desulfovibrio desulfuricans ND132] Length = 355 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 105/346 (30%), Positives = 171/346 (49%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72 + ++ L + +P ++ + K + + L + + + L DN + Sbjct: 5 LEEIEEKYVLLEQELAEPDIFNDQERYKKVSKAHADLSEVVEAFRRYKQLSQELDDNREM 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L A E E D + E + L D + LE+ AG GG E+ Sbjct: 65 LNDADPEIREMAKAEIDDLEGELPEIEEQLKVLLLPKDPMDEKNIILEIRAGTGGDEAAL 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMYTR+AE +K E + + G K I G Y LK E G HR+ R Sbjct: 125 FAADLYRMYTRYAEINHWKVEEMSANHTGSGGYKEVIASISGDKVYSKLKYESGTHRVQR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ + P + ++I++ D R+D +R+SG GGQ VNTTDSA+R+ Sbjct: 185 VPATESQGRIHTSAVTVAIMP-EAEEVDIDLRPEDLRVDVFRSSGPGGQSVNTTDSAIRV 243 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIP+G++V CQ E+SQHKNKA+A +LR++L ++E K + + ++++G G Sbjct: 244 THIPSGMIVICQDEKSQHKNKAKALKVLRSRLLQIEQDKAKAEQE--ANRRSQVGSGDRS 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +++G+L D A ++ + Sbjct: 302 ERIRTYNY-PQGRVSDHRINLTLHQLPQIMEGELQDLTDALISYFQ 346 >gi|290511305|ref|ZP_06550674.1| peptide chain release factor 2 [Klebsiella sp. 1_1_55] gi|289776298|gb|EFD84297.1| peptide chain release factor 2 [Klebsiella sp. 1_1_55] Length = 299 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 168/298 (56%), Positives = 211/298 (70%), Gaps = 1/298 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + + ++ L D LLELA+E +D E L ++ ++ +F + SGE DS Sbjct: 1 MDTLDQMSQGLEDVAGLLELAVEAEDEETFNEAVAELDGLEEKLAQLEFRRMFSGEYDSA 60 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 D YL++ AG+GGTE+QDWA+ML+RMY RWAE R FKTE +E +GE AGIKS T+ I G Sbjct: 61 DCYLDIQAGSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKIIGD 120 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 AYGWL+ E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRA Sbjct: 121 YAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRA 180 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ Sbjct: 181 SGAGGQHVNRTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAE 240 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 E +K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 241 KQAMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 297 >gi|320538900|ref|ZP_08038576.1| peptide chain release factor RF-1 [Serratia symbiotica str. Tucson] gi|320031060|gb|EFW13063.1| peptide chain release factor RF-1 [Serratia symbiotica str. Tucson] Length = 361 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 112/337 (33%), Positives = 173/337 (51%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + + + D + Sbjct: 9 LEALQERYEEVQALLGDAGVIAEQDRFRALSREYAQLTDVSRCFLKWRQIQGDLATAEMM 68 Query: 76 ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E K + Q L D +LEV AG GG E+ +A Sbjct: 69 QDDPEMREMAQEELKQAKATTKELEQQLQVLLLPKDPDDEGGCFLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + ++GE G K + G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAETRRWRVEMISANEGEHGGYKEVIAKVSGEGVYGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P V ++ +I++SD +IDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVMPEVPEAEMPDITQSDLKIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ +V+ G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMAGKLDMLIQ 342 >gi|313903650|ref|ZP_07837040.1| bacterial peptide chain release factor 1 (bRF-1) [Thermaerobacter subterraneus DSM 13965] gi|313466203|gb|EFR61727.1| bacterial peptide chain release factor 1 (bRF-1) [Thermaerobacter subterraneus DSM 13965] Length = 389 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 110/346 (31%), Positives = 181/346 (52%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R L + DP + + + L +ER L+ + + ++ D L Sbjct: 38 LAARLGRFDQLERELADPAVAADPRRWQPLAQERAELEPLVEAYRRWREAAADLEAARAL 97 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQF----ESLLSGEADSNDAYLEVHAGAGGTESQ 131 E ++ + ++R++ E + + L D D +E+ AG GG E+ Sbjct: 98 LREAEEADERAYLAAEVERLEGERQALERALRGLLLPRDPRDQRDVIMEIRAGTGGEEAA 157 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R+AE++ ++TE + + + G K + G A+ LK E GVHR+ Sbjct: 158 LFAGDLFRMYQRYAERQGWRTEIMAATESDLGGFKEIIFAVSGRGAFSRLKHESGVHRVQ 217 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P + +E++I D IDT+ ASG GGQHVN T+SAVR Sbjct: 218 RVPVTEAGGRIHTSTATVAVLP-EAEEVEVQIDPDDLEIDTFAASGPGGQHVNKTESAVR 276 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH PTG+VV CQ ERSQHKN+A+A +LRA+L + ++++E + + ++++G G + Sbjct: 277 ITHKPTGIVVTCQDERSQHKNRARAMKILRARLLDYYTRRQQEE--LSQQRRSQVGTGER 334 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y + V D R + +V+DGDLD+ + A A Sbjct: 335 SEKIRTYNFR-ENRVTDHRIGLTLYRLQEVMDGDLDELLDALAAHD 379 >gi|224477106|ref|YP_002634712.1| peptide chain release factor 1 [Staphylococcus carnosus subsp. carnosus TM300] gi|254790897|sp|B9DMD1|RF1_STACT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|222421713|emb|CAL28527.1| peptide chain release factor 1 [Staphylococcus carnosus subsp. carnosus TM300] Length = 358 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 109/351 (31%), Positives = 185/351 (52%), Gaps = 13/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD D +R LN DP + + + + +E+ L + ++ + D Sbjct: 1 MFDQLDIVEERYEQLNELLSDPDVVSDSNKLREYSKEQSDLQKTVDVYRQYKQNKEDIDE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 ++E+ E D + ++ +K + + + D + +E+ A AGG Sbjct: 61 IVEMLSETSDKEEVDMLKADMNELKDTLPGLEEELKMLLIPKDPNDDKNVVVEIRAAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR++E +KT +E++D + G K + I G AY LK E G Sbjct: 121 DEAAIFAGDLYRMYTRFSEGLGYKTGVIEMNDSDHGGFKEISFTINGQGAYSKLKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +E++I ++D +I+TYR+SGAGGQHVNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EAEDVEVDIKDADLKIETYRSSGAGGQHVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG++ E+SQ +N+ +A +L+A++Y+++LQ EE K+ +G Sbjct: 240 SAVRITHLPTGIIATSS-EKSQIQNREKALKVLKARVYDMKLQ--EEQEKYDSERKSAVG 296 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++G LD+ + A ++ Sbjct: 297 TGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIVEGKLDEIIDALTMSEQ 346 >gi|255020676|ref|ZP_05292738.1| Peptide chain release factor 1 [Acidithiobacillus caldus ATCC 51756] gi|254969912|gb|EET27412.1| Peptide chain release factor 1 [Acidithiobacillus caldus ATCC 51756] Length = 365 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 125/362 (34%), Positives = 184/362 (50%), Gaps = 15/362 (4%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 M LS +L + +R L P + Q+ + RE + + ++ Sbjct: 1 MSLSPRLEA-----QLEQLAERAEELQKALASPEIVQDNARFQAFSRELGEIQPILELLQ 55 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSND 116 +++ EL L E D + ++ + + E+ + L D + Sbjct: 56 AHEEQRQRWDEARELLLAERDPELRALAEEDQREAEAELARIEESLQVRLLPRDPNDERN 115 Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 +LE+ AG GG E+ +A L RMYTR+AE R F L + E G K L I G Sbjct: 116 VFLEIRAGTGGEEAALFAADLARMYTRYAEGRGFGVTVLSSTESERGGYKEIVLEISGRG 175 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 AY LK E G HR+ R+ +S R HTS ++ V P VD EI I SD RIDTYRAS Sbjct: 176 AYSRLKFESGGHRVQRVPETESQGRIHTSACTVAVLPEVDAVHEIHIQPSDLRIDTYRAS 235 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 GAGGQHVN TDSA+RITH+PTG+VV CQ++RSQHKN+A+A +L+A+L LE+ + ++ + Sbjct: 236 GAGGQHVNKTDSAIRITHLPTGLVVACQEDRSQHKNRARAMALLQARL--LEMVREQQES 293 Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + + ++ IG G +IR+Y P + D R N+ VL G+LD + + Sbjct: 294 STAATRRSLIGSGDRSERIRTYNF-PQGRITDHRINLTIYRLEAVLAGELDALIDPLIRE 352 Query: 354 KK 355 + Sbjct: 353 HQ 354 >gi|159044282|ref|YP_001533076.1| peptide chain release factor 1 [Dinoroseobacter shibae DFL 12] gi|189039970|sp|A8LLU7|RF1_DINSH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|157912042|gb|ABV93475.1| peptide chain release factor 1 [Dinoroseobacter shibae DFL 12] Length = 351 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 114/344 (33%), Positives = 175/344 (50%), Gaps = 12/344 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +R ++ + +++ L RE L ++ I D + Sbjct: 7 LAQITERFEYIEARMAAGAAGEDIA---ALGREYAELKPVVAEIAAYSRARADLAEAEAM 63 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + ++ +E L+ + + L AD+ A +E+ G GG E+ +A Sbjct: 64 LDDPEMRALAEEEIPALKARIPEMEQALRLALLPKDAADARPAMIEIRPGTGGEEAALFA 123 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE + ++ + + E GIK + G + LK E GVHR+ R+ Sbjct: 124 GDLLRMYQRYAEAQGWRFQIVSESLTELGGIKEVIAHVSGSGVFAKLKYESGVHRVQRVP 183 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P ++++I+I SD RIDT RASGAGGQHVNTTDSAVRITH Sbjct: 184 VTESGGRIHTSAATVAVLP-EAEAVDIDIPASDIRIDTMRASGAGGQHVNTTDSAVRITH 242 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV E+SQH+N+ A +LRA+LY+LE Q+ A + K ++G G + Sbjct: 243 IPTGLVVTSS-EKSQHRNRDIAMQVLRARLYDLERQR--ADAERSAARKGQVGSGDRSER 299 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ V+ GDLD+ + A A + Sbjct: 300 IRTYNF-PQGRMTDHRINLTLYKLDQVMQGDLDEVIAALAADDQ 342 >gi|116625721|ref|YP_827877.1| peptide chain release factor 1 [Candidatus Solibacter usitatus Ellin6076] gi|122252101|sp|Q01RX8|RF1_SOLUE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|116228883|gb|ABJ87592.1| bacterial peptide chain release factor 1 (bRF-1) [Candidatus Solibacter usitatus Ellin6076] Length = 362 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 109/341 (31%), Positives = 172/341 (50%), Gaps = 10/341 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +R L + DP + + + + + + + L + + +E + + Sbjct: 7 LDQLEKRFDELTQQMADPAVISDADQYRKVAKAQSELSDIAAKYREWKKVEDGLAQARPM 66 Query: 76 ALEEDDC-SILQETSDNLQRIKLEVEYKQF--ESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + E + ++ L D + LE+ AG GG E+ Sbjct: 67 LQEQDAELKEMAELEIAQLEPEKLRIEEELRVLLLPKDPNDDKNVVLEIRAGTGGDEATL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A + RMY+R+AE + +K E + G+K L+ G Y LK E GVHR+ R Sbjct: 127 FAAEIFRMYSRYAETQNWKMEVTSSSESSVGGLKEVIALVSGNKVYAKLKYESGVHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + + R HTS ++ V P D +E+++ D RIDT+ +SG GGQ VNTT SAVRI Sbjct: 187 VPVTEQQGRVHTSAITVAVLP-EADEVEVKLEAKDIRIDTFCSSGPGGQSVNTTYSAVRI 245 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV CQ E+SQ KN+A+A +LR++LYELEL+K++ A +G +T +G G Sbjct: 246 THLPTGLVVSCQDEKSQIKNRAKAERVLRSRLYELELEKQQ--AALGAERRTMVGSGDRS 303 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R + V++G +D + A Sbjct: 304 EKIRTYNF-PQNRVSDHRIGLTLHQLDFVMEGKMDAIVDAL 343 >gi|260062127|ref|YP_003195207.1| peptide chain release factor 1 [Robiginitalea biformata HTCC2501] gi|88783689|gb|EAR14860.1| peptide chain release factor 1 [Robiginitalea biformata HTCC2501] Length = 358 Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats. Identities = 103/346 (29%), Positives = 177/346 (51%), Gaps = 12/346 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCD 68 + D + QR ++ P + + L +E + L + ++Q+R+ + Sbjct: 1 MLDKLNIVKQRFDEVSDLIIQPDIIADQKRYIQLNKEYKDLKEIVDMREKYIQLQNRISE 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGG 127 +L + + + + + + +E + + + D+ D +E+ AG GG Sbjct: 61 AEEILSDGSDPEMAEMAKLQLEEAREAIPPLEDAIKMKLIPKDPEDAKDVVMEIRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYT++ E R +KT +++ +G G K + G + YG LK E GV Sbjct: 121 DEASIFAGDLFRMYTKYCESRGWKTNVIDLSEGTSGGFKEIHFEVSGEDVYGTLKFEAGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS +++ V P +D I D RID + +SG GGQ VNTT Sbjct: 181 HRVQRVPQTETQGRVHTSAATVMVLPEAEDFDVQ-IDPKDVRIDYFCSSGPGGQSVNTTY 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+V QCQ E+SQHKNK +A+ +LR++LY++EL K++E +++ Sbjct: 240 SAVRLTHVPTGIVAQCQDEKSQHKNKDKAFKVLRSRLYDMELAKKQEE--DAAKRNSQVS 297 Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G + IR+Y P V D R + ++++GD+ + Sbjct: 298 SGDRSAKIRTYNY-PQGRVTDHRIGLTLYDLQNIINGDIQKIIDEL 342 >gi|219670829|ref|YP_002461264.1| peptide chain release factor 1 [Desulfitobacterium hafniense DCB-2] gi|254790878|sp|B8FZ76|RF1_DESHD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|219541089|gb|ACL22828.1| peptide chain release factor 1 [Desulfitobacterium hafniense DCB-2] Length = 355 Score = 222 bits (565), Expect = 6e-56, Method: Composition-based stats. Identities = 109/345 (31%), Positives = 174/345 (50%), Gaps = 11/345 (3%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 +R L DP + N E + + + + + + +E + + L Sbjct: 7 EIERRYDELTQLLSDPEVIGNQSEWQKYAKAQAGMTDIVEAFREYSEVVKHLEETQGLLE 66 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E+ D + L+ + + + + L D + +E+ AGAGG E+ + Sbjct: 67 EKLDPEFKEMAELELEELTEKRDELEEKMRILLLPKDPNDDKNVIMEIRAGAGGEEAALF 126 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A L RMYT++AE + ++TE L + G K LI+G AY LK E GVHR+ R+ Sbjct: 127 AGDLYRMYTKYAEHQGWRTELLSASYTDIGGFKEIIFLIEGQGAYSKLKFESGVHRVQRV 186 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +S R HTS +++ V P + +++ I+ +D RID + +SG GGQ VNTT SAVRIT Sbjct: 187 PTTESGGRIHTSTTTVAVLP-EAEEVDVAINPNDLRIDIFCSSGPGGQSVNTTQSAVRIT 245 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H+PTG VV CQ E+SQ KNK +A +LRA+L LE + E + + ++++G G Sbjct: 246 HVPTGTVVSCQDEKSQLKNKEKALRVLRARL--LERAQEEAMGELASERRSQVGTGDRSE 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G+LD+ + A + + Sbjct: 304 RIRTYNF-PQGRVTDHRIGLTLHRLDSILLGELDEVINALITTDQ 347 >gi|308071169|ref|YP_003872774.1| peptide chain release factor 1 [Paenibacillus polymyxa E681] gi|305860448|gb|ADM72236.1| Peptide chain release factor 1 (RF-1) [Paenibacillus polymyxa E681] Length = 355 Score = 222 bits (565), Expect = 6e-56, Method: Composition-based stats. Identities = 104/351 (29%), Positives = 179/351 (50%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + R L+ DP + + + + +E+ L A E ++ + + Sbjct: 1 MLDRLQSLADRYDKLSELLCDPDVANDSKKLRDYSKEQSDLQPAYEAYTEYKNVVEELEA 60 Query: 72 LLELALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + E+ D + + ++ R + E + L D + +E+ AGG Sbjct: 61 AKTMQGEKLDDEMREMVKMEIEELSVRKRELDEKIRILLLPKDPNDDKNVIIEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR+A+ + ++ E ++ + + G K +I G AY +K E G Sbjct: 121 DEAALFAADLYRMYTRYADTQGWRVELMDANMNDLGGFKEVIFMINGRGAYSKMKFESGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +S R HTS S++ V P + ++IEIS+ D R+DT+ +SGAGGQ VNTT Sbjct: 181 HRVQRIPTTESGGRIHTSTSTVSVMP-EAEEVDIEISDKDIRVDTFCSSGAGGQSVNTTK 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG++ CQ +SQ+ NK +A +LRA++ ++ Q EE A K+++G Sbjct: 240 SAVRVTHMPTGIMATCQDGKSQNSNKEKALQVLRARISDMLRQ--EEEAKYAGERKSKVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + V++G++++ + A ++ Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTMHKLDQVMNGEIEEIVSALTIAEQ 347 >gi|121587849|ref|ZP_01677606.1| peptide chain release factor 2 [Vibrio cholerae 2740-80] gi|121728386|ref|ZP_01681414.1| peptide chain release factor 2 [Vibrio cholerae V52] gi|147673826|ref|YP_001216157.1| peptide chain release factor 2 [Vibrio cholerae O395] gi|153216950|ref|ZP_01950714.1| peptide chain release factor 2 [Vibrio cholerae 1587] gi|153801991|ref|ZP_01956577.1| peptide chain release factor 2 [Vibrio cholerae MZO-3] gi|153818695|ref|ZP_01971362.1| peptide chain release factor 2 [Vibrio cholerae NCTC 8457] gi|153822281|ref|ZP_01974948.1| peptide chain release factor 2 [Vibrio cholerae B33] gi|153826509|ref|ZP_01979176.1| peptide chain release factor 2 [Vibrio cholerae MZO-2] gi|153829166|ref|ZP_01981833.1| peptide chain release factor 2 [Vibrio cholerae 623-39] gi|227080844|ref|YP_002809395.1| peptide chain release factor 2 [Vibrio cholerae M66-2] gi|229505715|ref|ZP_04395225.1| peptide chain release factor 2 [Vibrio cholerae BX 330286] gi|229508711|ref|ZP_04398204.1| protein chain release factor B [Vibrio cholerae B33] gi|229512924|ref|ZP_04402391.1| peptide chain release factor 2 [Vibrio cholerae TMA 21] gi|229519540|ref|ZP_04408983.1| peptide chain release factor 2 [Vibrio cholerae RC9] gi|229520954|ref|ZP_04410376.1| peptide chain release factor 2 [Vibrio cholerae TM 11079-80] gi|229530470|ref|ZP_04419858.1| peptide chain release factor 2 [Vibrio cholerae 12129(1)] gi|229608734|ref|YP_002879382.1| protein chain release factor B [Vibrio cholerae MJ-1236] gi|254226529|ref|ZP_04920112.1| peptide chain release factor 2 [Vibrio cholerae V51] gi|255743877|ref|ZP_05417833.1| peptide chain release factor 2 [Vibrio cholera CIRS 101] gi|262156096|ref|ZP_06029215.1| peptide chain release factor 2 [Vibrio cholerae INDRE 91/1] gi|262169962|ref|ZP_06037652.1| peptide chain release factor 2 [Vibrio cholerae RC27] gi|262191216|ref|ZP_06049415.1| peptide chain release factor 2 [Vibrio cholerae CT 5369-93] gi|121547885|gb|EAX57969.1| peptide chain release factor 2 [Vibrio cholerae 2740-80] gi|121629320|gb|EAX61752.1| peptide chain release factor 2 [Vibrio cholerae V52] gi|124114015|gb|EAY32835.1| peptide chain release factor 2 [Vibrio cholerae 1587] gi|124122450|gb|EAY41193.1| peptide chain release factor 2 [Vibrio cholerae MZO-3] gi|125620933|gb|EAZ49284.1| peptide chain release factor 2 [Vibrio cholerae V51] gi|126510775|gb|EAZ73369.1| peptide chain release factor 2 [Vibrio cholerae NCTC 8457] gi|126520177|gb|EAZ77400.1| peptide chain release factor 2 [Vibrio cholerae B33] gi|146315709|gb|ABQ20248.1| peptide chain release factor 2 [Vibrio cholerae O395] gi|148875355|gb|EDL73490.1| peptide chain release factor 2 [Vibrio cholerae 623-39] gi|149739689|gb|EDM53896.1| peptide chain release factor 2 [Vibrio cholerae MZO-2] gi|227008732|gb|ACP04944.1| peptide chain release factor 2 [Vibrio cholerae M66-2] gi|227012488|gb|ACP08698.1| peptide chain release factor 2 [Vibrio cholerae O395] gi|229332243|gb|EEN97731.1| peptide chain release factor 2 [Vibrio cholerae 12129(1)] gi|229342187|gb|EEO07183.1| peptide chain release factor 2 [Vibrio cholerae TM 11079-80] gi|229344229|gb|EEO09204.1| peptide chain release factor 2 [Vibrio cholerae RC9] gi|229350173|gb|EEO15126.1| peptide chain release factor 2 [Vibrio cholerae TMA 21] gi|229354235|gb|EEO19165.1| protein chain release factor B [Vibrio cholerae B33] gi|229357938|gb|EEO22855.1| peptide chain release factor 2 [Vibrio cholerae BX 330286] gi|229371389|gb|ACQ61812.1| protein chain release factor B [Vibrio cholerae MJ-1236] gi|255738508|gb|EET93897.1| peptide chain release factor 2 [Vibrio cholera CIRS 101] gi|262021696|gb|EEY40407.1| peptide chain release factor 2 [Vibrio cholerae RC27] gi|262030132|gb|EEY48777.1| peptide chain release factor 2 [Vibrio cholerae INDRE 91/1] gi|262032918|gb|EEY51457.1| peptide chain release factor 2 [Vibrio cholerae CT 5369-93] gi|327483462|gb|AEA77869.1| Peptide chain release factor 2 [Vibrio cholerae LMA3894-4] Length = 299 Score = 222 bits (565), Expect = 6e-56, Method: Composition-based stats. Identities = 166/297 (55%), Positives = 216/297 (72%), Gaps = 1/297 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + I ++ + D LLELA+E +D E L ++ ++E +F + SG+ DS+ Sbjct: 1 MDTIDQLDRGVDDVEGLLELAIEAEDQETFDEIGPELDELEAKLEQLEFRRMFSGDHDSS 60 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 D YL++ AG+GGTE+QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G Sbjct: 61 DCYLDLQAGSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGD 120 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 AYGWL+ E GVHRLVR SP+DS RRHTSF+S ++YP VD++I+IEI+ +D RID YRA Sbjct: 121 YAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRA 180 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK QA LRAKL+ELELQK+ Sbjct: 181 SGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAE 240 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E +K++IGWG QIRSYVL +KDLRT IE + VLDGDLD F++A+L Sbjct: 241 KQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDKFIEASLK 296 >gi|322434298|ref|YP_004216510.1| peptide chain release factor 1 [Acidobacterium sp. MP5ACTX9] gi|321162025|gb|ADW67730.1| peptide chain release factor 1 [Acidobacterium sp. MP5ACTX9] Length = 358 Score = 222 bits (565), Expect = 6e-56, Method: Composition-based stats. Identities = 95/350 (27%), Positives = 164/350 (46%), Gaps = 12/350 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD R L+ DP L + + + + +E + ++ + ++ + Sbjct: 1 MFDRLAQMEVRYDSLSRDMSDPVLVNDQKKFQAIAKEHRLMEPIVEKYRQYRKVADGIAE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL---LSGEADSNDAYLEVHAGAGGT 128 + E D + + + D + +E+ AG GG Sbjct: 61 AKAMLSESDPDLKEMAKEELASLEPQLEPIAEALKVMLLPKDPNDDKNIVIELRAGTGGD 120 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGV 187 E+ + + R+Y R AE+ ++K + L G+K T + +G Y +K E GV Sbjct: 121 EAALFVAEMFRVYLRLAEQHRWKVQVLSESFSGIGNGLKDVTAIFEGDRVYSQMKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS ++ V P + ++I+I D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPATETQGRVHTSAITVAVLP-EAEEVDIKIEAKDLRVDTFCSSGPGGQSVNTTY 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SA+RITH+PT VV CQ E+SQ KN+ +A +LR++LYE+ + R + K ++G Sbjct: 240 SAIRITHLPTNTVVSCQDEKSQIKNREKAMRVLRSRLYEVAEETRHQAEAKI--RKDQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 G +IR+Y P + D R + + + V++G L + A +A Sbjct: 298 TGDRSEKIRTYNF-PQNRLTDHRIGLTNHNLNMVMEGQLQPTIDALIAHD 346 >gi|699334|gb|AAA63095.1| prfA [Mycobacterium leprae] Length = 357 Score = 222 bits (565), Expect = 6e-56, Method: Composition-based stats. Identities = 116/350 (33%), Positives = 165/350 (47%), Gaps = 13/350 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + + L DP L N EA+ R L ++ +++ D EL Sbjct: 4 IDVLLIEHAELELALADPELHSNPAEARKAGRRFARLAPIVATHRKLISARDDLQTAREL 63 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A ++ + ++ +D LEV +G GG ES +A Sbjct: 64 AAGDESFADEIAELESRIAELTTQLTDML--APHDPHGPDDIVLEVKSGEGGEESALFAA 121 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG---------PNAYGWLKGEQG 186 L RMY R+AE+ + L+ + G K ATL I + +K E G Sbjct: 122 DLARMYIRYAERHGWTVTVLDETTSDLGGYKDATLAISHKGASDGDAVDGVWSRMKFEGG 181 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S R HTS + + VYP ++ E+ I ESD RID YR+SG GGQ VNTT Sbjct: 182 VHRVQRVPVTESQGRVHTSAAGVLVYPEPEEIGEVHIDESDLRIDVYRSSGKGGQGVNTT 241 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE- 305 DSAVRITH+PTGVVV CQ ERSQ +NK +A +L A+L + ++ A+ +S+ Sbjct: 242 DSAVRITHLPTGVVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALANASADRASQIRT 301 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + +IR+Y P + D R + + VLDGDLD A A K Sbjct: 302 VDRSERIRTYNF-PENRITDHRIGYKAHNLDQVLDGDLDALFDALSAADK 350 >gi|229087819|ref|ZP_04219935.1| Peptide chain release factor 1 [Bacillus cereus Rock3-44] gi|228695494|gb|EEL48363.1| Peptide chain release factor 1 [Bacillus cereus Rock3-44] Length = 358 Score = 222 bits (565), Expect = 7e-56, Method: Composition-based stats. Identities = 117/347 (33%), Positives = 182/347 (52%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72 R LN DP + + + + +E+ + + + +E +D +L D + Sbjct: 8 LQAVEDRYEKLNELLSDPEIISDSNKLREYSKEQSDIQDTVEVYREYKDVREQLRDAKAM 67 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LE L+ + +++E L+ + E+ + + + D + +EV AGG E+ Sbjct: 68 LEEKLDAEMRDMVKEEVSELEGQEKELSERLKILLVPKDPNDDKNVIVEVRGAAGGDEAA 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AE + +KTE +E E G K +I G A+ LK E G HR+ Sbjct: 128 LFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + +EI+I E D R+DT+ +SG GGQ VNTT SAVR Sbjct: 188 RVPETESGGRIHTSTATVAVLP-EAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTMSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K +G G Sbjct: 247 LTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LDDF+ A + + Sbjct: 305 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350 >gi|313676496|ref|YP_004054492.1| bacterial peptide chain release factor 1 (brf-1) [Marivirga tractuosa DSM 4126] gi|312943194|gb|ADR22384.1| bacterial peptide chain release factor 1 (bRF-1) [Marivirga tractuosa DSM 4126] Length = 355 Score = 222 bits (565), Expect = 7e-56, Method: Composition-based stats. Identities = 108/348 (31%), Positives = 169/348 (48%), Gaps = 8/348 (2%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + +R + P ++ + L +E L+ + L D Sbjct: 1 MLDRLERMKERFQEVGQLMVQPDAMADMKKFTELSKEYADLEKVVEVYDAYTKVLDDIKQ 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127 + E + + + +K E + + E DS +A LE+ AG GG Sbjct: 61 AKNILENEKEPEFREMAKMEWEELKPERDRLEEELKKMLIPKDPNDSKNAVLEIRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L +MY R+ +K L++ G G K + G NAYG LK E GV Sbjct: 121 DEAAIFAGDLFKMYQRFCDKNGLNLTVLDLTFGTAGGYKEIISTVTGKNAYGTLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS +++ V P D +E+EI +D R DTY +SG GGQ VNTT Sbjct: 181 HRVQRVPQTETQGRVHTSAATVAVLP-EIDDVEVEIDMNDVRKDTYCSSGPGGQSVNTTY 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+VV CQ ++SQ KN +A +LR++LYE+EL K+ E S G Sbjct: 240 SAVRLTHEPTGLVVTCQDQKSQIKNFDKALRVLRSRLYEIELAKQNEEVGAQRRSIVRSG 299 Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P V D R N + ++++G+++D ++ + Sbjct: 300 DRSDKIRTYNY-PQGRVTDHRINYTVHNLPNIMNGEIEDLIENLQIAE 346 >gi|116494651|ref|YP_806385.1| peptide chain release factor 1 [Lactobacillus casei ATCC 334] gi|191638150|ref|YP_001987316.1| peptide chain release factor 1 [Lactobacillus casei BL23] gi|227535366|ref|ZP_03965415.1| peptide chain release factor RF1 [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239631748|ref|ZP_04674779.1| peptide chain release factor 1 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066209|ref|YP_003788232.1| protein chain release factor A [Lactobacillus casei str. Zhang] gi|122263928|sp|Q03A29|RF1_LACC3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238693030|sp|B3WDK7|RF1_LACCB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|116104801|gb|ABJ69943.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus casei ATCC 334] gi|190712452|emb|CAQ66458.1| Peptide chain release factor 1 (RF-1) [Lactobacillus casei BL23] gi|227186962|gb|EEI67029.1| peptide chain release factor RF1 [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239526213|gb|EEQ65214.1| peptide chain release factor 1 [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300438616|gb|ADK18382.1| Protein chain release factor A [Lactobacillus casei str. Zhang] gi|327382180|gb|AEA53656.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus casei LC2W] gi|327385377|gb|AEA56851.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus casei BD-II] Length = 359 Score = 222 bits (565), Expect = 7e-56, Method: Composition-based stats. Identities = 108/352 (30%), Positives = 179/352 (50%), Gaps = 12/352 (3%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +F+ D + R L DP + + L +E + + ++ K+ + L D Sbjct: 3 KIFEQLDGLLDRYEELQELMSDPEVISDTKRYLALSKEEGGMRDVVAAYKKYKQVLSDIK 62 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAG 126 E+ E D + ++L+ ++ + + L D + +E+ AG Sbjct: 63 ESEEVLRESKDDDMEALAKEDLEDLQKQKADLEDQIKVLMLPKDPNDDKNIIMEIRGAAG 122 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A LL MY +AE++ +KTE ++ E G K ++I G N Y LK E G Sbjct: 123 GDEASLFAGDLLNMYMHYAERQGWKTEIIDATPTEVGGYKEVVVMITGDNVYSKLKYENG 182 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P D ++++I D R D YR+SGAGGQHVN T Sbjct: 183 AHRVQRVPVTESAGRVHTSTATVGVMP-EYDEVDLKIDPKDIRTDVYRSSGAGGQHVNKT 241 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+THIP+G+VV Q ERSQ +N+A+A +LR+++Y+ + +E ++ K I Sbjct: 242 SSAVRMTHIPSGIVVSMQDERSQQENRARAMQILRSRVYDYYETQNQE--KYDQNRKNAI 299 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R + +++G+LD+ + A + + Sbjct: 300 GTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIVHDQ 350 >gi|332829242|gb|EGK01896.1| peptide chain release factor 1 [Dysgonomonas gadei ATCC BAA-286] Length = 361 Score = 222 bits (565), Expect = 7e-56, Method: Composition-based stats. Identities = 103/346 (29%), Positives = 171/346 (49%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V R + DP + ++ L +E + L+ E + L + + Sbjct: 10 LDTLVMRFEEIGKLITDPSVIADMKRYVKLNKEYRDLEKISIARNEYKQLLTNVEEAKNI 69 Query: 76 ALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E+D + + + R+ E + + + DS +A +E+ G GG E+ Sbjct: 70 LDSENDAELREMAREELDTANVRLPELEEEIKLLLVPADPEDSKNAIVEIRGGTGGDEAA 129 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY ++ E + ++TE + +G G K + G YG LK E GVHR+ Sbjct: 130 IFAGDLYRMYIKYCELKGWRTEITSLTEGTSGGYKEVIFTVTGEGVYGILKYESGVHRVQ 189 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P + +++EI+ +D + T R+SGAGGQ+VN ++ V+ Sbjct: 190 RVPATETQGRVHTSAATVAVLP-EAEEVDVEINPADIEMQTARSSGAGGQNVNKVETKVQ 248 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +TH P+G+VV CQQ RSQ N+ A MLR KLY++EL K + I KT + G + Sbjct: 249 LTHKPSGLVVVCQQARSQLANRELAMQMLRTKLYDIELSKYQAE--IASKRKTMVSTGDR 306 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P V D R N+ + S V+DG++ + + + Sbjct: 307 SAKIRTYNY-PQGRVTDHRINLTLYNLSGVMDGEIQPIIDQLIIAE 351 >gi|282882091|ref|ZP_06290732.1| peptide chain release factor 1 [Peptoniphilus lacrimalis 315-B] gi|281298121|gb|EFA90576.1| peptide chain release factor 1 [Peptoniphilus lacrimalis 315-B] Length = 358 Score = 222 bits (565), Expect = 7e-56, Method: Composition-based stats. Identities = 110/343 (32%), Positives = 173/343 (50%), Gaps = 11/343 (3%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 R + L D ++ N + E L +S +E + + L E+ Sbjct: 9 EDRYNELEKSLMDINVINNSSLYQKTAIEHAELQPIVSKYREYKKTKENLNDSKALLAEK 68 Query: 80 DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 D + D++ + +E + + D + +E+ AGAGG E+ +A Sbjct: 69 LDDDMKDLVKDDISTNEKNLEKIEEDLKILLIPKDPNDKKNVMVEIRAGAGGDEAALFAG 128 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L R Y R+AE+ +K + + ++ G K +I G AY LK E GVHR+ R+ Sbjct: 129 TLFRQYVRYAERCGWKVDIISTNEIGIGGYKEVVFMIIGRGAYSRLKYESGVHRVQRVPE 188 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS +++ V P + +E+EI ++ + D +RASG GGQ VNTTDSAVR+THI Sbjct: 189 TESGGRIHTSTATVAVLP-EVEDVEVEIDPTEIKFDVFRASGNGGQCVNTTDSAVRLTHI 247 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTG+V+ CQ E+SQ NK +A +LRAKLY+L++Q++ E +++G G +I Sbjct: 248 PTGIVISCQDEKSQLMNKEKAMKLLRAKLYDLKIQEQNE--KNSAQRLSQVGTGDRSERI 305 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R+Y P V D R N + DG+LD+ + A A + Sbjct: 306 RTYNY-PQGRVTDHRINYTTHQIVSINDGELDELIDALTAADQ 347 >gi|169825227|ref|YP_001692838.1| peptide chain release factor B [Finegoldia magna ATCC 29328] gi|167832032|dbj|BAG08948.1| peptide chain release factor B [Finegoldia magna ATCC 29328] Length = 324 Score = 222 bits (565), Expect = 7e-56, Method: Composition-based stats. Identities = 154/319 (48%), Positives = 218/319 (68%) Query: 34 HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93 W + +A+ + E + + + EI++++ + ++LE++ E++ +E S L+ Sbjct: 4 GFWDDSDKAQEIFDELNSVKDDVENYDEIEEKIEEVKMMLEISKEDNTEEYEKEISKTLK 63 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 ++ V+ + ++LL GE D N+A + +HAGAGGTE+QDWA MLLRMYTRW +K+ + Sbjct: 64 NLEKNVDEFKIKTLLVGEYDRNNAIMSIHAGAGGTEAQDWAEMLLRMYTRWIADKKYSYK 123 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 + + E GIKS +L+++G NAYG+LK E+GVHRLVRISP+D RRHTSF+S+ V+P Sbjct: 124 ITDYNQDTEGGIKSVSLIVQGINAYGFLKSEKGVHRLVRISPFDQQKRRHTSFASVDVFP 183 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 + D+ +I+I + D +IDTYRASGAGGQHVN TDSAVRITHIPTGV VQCQ ERSQ N+ Sbjct: 184 EIKDNHDIQIDDKDLKIDTYRASGAGGQHVNMTDSAVRITHIPTGVTVQCQTERSQIANR 243 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A +ML AKL ++ +++ E + +I WG QIRSYV QPY +VKD RTN E + Sbjct: 244 KYAMDMLIAKLIMIKEEEKREKIEDIQGKYNQIAWGSQIRSYVFQPYTLVKDHRTNCESS 303 Query: 334 SPSDVLDGDLDDFMKATLA 352 DVLDGDLD F+ A L+ Sbjct: 304 QVQDVLDGDLDKFINAYLS 322 >gi|163783081|ref|ZP_02178076.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1] gi|159881761|gb|EDP75270.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1] Length = 361 Score = 222 bits (565), Expect = 7e-56, Method: Composition-based stats. Identities = 122/345 (35%), Positives = 180/345 (52%), Gaps = 10/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72 + ++ + + P + Q+V + L RE + L +E + L + L Sbjct: 10 LEKLTEKYKRIEEELSKPEVIQDVKRYRELSREHKELAELYETYQEYKRLQRELNEAKEL 69 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L+ +E +E D RI E + + DS + LE+ AG GG E+ Sbjct: 70 LKSPEKELKELAQEEIEDIQSRIPELEEKLKLLLVPKDPNDSKNVILEIRAGTGGEEAAL 129 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 + LLRMY ++AE + +K L + G K LI+G AY LK E GVHR+ R Sbjct: 130 FVADLLRMYQKYAEDKGWKFSILNANKTGLGGYKEVIALIEGEGAYSRLKYESGVHRVQR 189 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 I +S R HTS +++ V P D++ I+ D +I+T+RASGAGGQ+VNTT++AVRI Sbjct: 190 IPVTESGGRIHTSTATVAVLPEADEADVE-INPQDLKIETFRASGAGGQYVNTTETAVRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311 TH PTG+VV CQ ERSQ +NK +A +L AKL + +K+ E I K ++G G + Sbjct: 249 THTPTGIVVSCQDERSQFQNKQKALKILYAKLKDFYERKKREE--IARERKEQVGTGERS 306 Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P V D R N+ +DVL+G LD+F+ A A + Sbjct: 307 EKIRTYNF-PQNRVTDHRVNLTLYKLNDVLEGKLDEFIDALRAKE 350 >gi|298529663|ref|ZP_07017066.1| peptide chain release factor 1 [Desulfonatronospira thiodismutans ASO3-1] gi|298511099|gb|EFI35002.1| peptide chain release factor 1 [Desulfonatronospira thiodismutans ASO3-1] Length = 356 Score = 222 bits (565), Expect = 7e-56, Method: Composition-based stats. Identities = 112/341 (32%), Positives = 177/341 (51%), Gaps = 10/341 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D Q+ + T DP ++ N + + L + L +S +E + + + EL Sbjct: 5 LDELEQQYMQIETDLSDPEVFSNQEKYRKLSKSHSELGPIVSTYREYRRIVSEMEENREL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYLEVHAGAGGTESQD 132 A + D ++ + + ++ + + S D + LE+ AG GG E+ Sbjct: 65 ARDRDPEIRELAQAELETLQEEKDRLEEDLKIQLVPSDPLDDKNIILEIRAGTGGEEAAL 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY R+AE+R +K E L + + GIK I G Y LK E GVHR+ R Sbjct: 125 FAADLFRMYFRYAEERSWKVEVLNMQETGTGGIKEVIASISGKKVYSRLKYESGVHRVQR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ + P + +++ I +D R+D +RASG GGQ VNTTDSAVRI Sbjct: 185 VPETESQGRVHTSAVTVAILP-EAEEVDVNIEPNDLRVDVFRASGPGGQSVNTTDSAVRI 243 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV CQ E+SQHKN+A+A +LR++L ++ + E+ ++ + ++G G Sbjct: 244 THIPTGLVVSCQDEKSQHKNRAKALKVLRSRLLQIMEE--EQKREYDDNRRAQVGSGDRS 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R N+ + V+ G LD + Sbjct: 302 ERIRTYNF-PQSRVTDHRINLTLYNLESVMQGHLDGIIDPL 341 >gi|313203258|ref|YP_004041915.1| bacterial peptide chain release factor 1 (brf-1) [Paludibacter propionicigenes WB4] gi|312442574|gb|ADQ78930.1| bacterial peptide chain release factor 1 (bRF-1) [Paludibacter propionicigenes WB4] Length = 361 Score = 222 bits (565), Expect = 8e-56, Method: Composition-based stats. Identities = 110/346 (31%), Positives = 175/346 (50%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + ++T DP + + L +E L+ ++ E + L EL Sbjct: 10 LEGLQHKFEEISTLITDPSVITDQKRFVKLNKEYHDLEMILNAKNEYEMALAHLAEAKEL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + I+ + + + + D+ +A +E+ G GG E+ Sbjct: 70 LDTESDPEMREMAKAEVDSIEPIIPEMEENIKLLLIPADPEDNKNAIVEIRGGTGGDEAA 129 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L +MYT++ E + ++ E I +G G K + G N YG LK E GVHR+ Sbjct: 130 IFAGDLFKMYTKYCETKGWRLEITNISEGTAGGYKEIIFTVTGENVYGTLKYESGVHRVQ 189 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P +++ E+ ESD R+DT+ +SGAGGQ VNTT SA+R Sbjct: 190 RVPQTETQGRVHTSAATVAVLPEMEEFD-YELKESDVRVDTFCSSGAGGQSVNTTYSAIR 248 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 + HIPTG VQCQ E+SQHKNKA+A N LR++LY +E QK + IG KT + G + Sbjct: 249 LVHIPTGTTVQCQDEKSQHKNKAKAMNELRSRLYAIEHQKYLDE--IGSKRKTMVSTGDR 306 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P + D R N + S + GD+ + + + Sbjct: 307 SAKIRTYNY-PQGRITDHRINFTIYNLSAFMGGDIQGVIDQLIVAE 351 >gi|258592988|emb|CBE69299.1| peptide chain release factor 1 [NC10 bacterium 'Dutch sediment'] Length = 358 Score = 222 bits (565), Expect = 8e-56, Method: Composition-based stats. Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 20/362 (5%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 ++L +L D QR + + + DP + + + L + L+ + + Sbjct: 2 LQLRERL---------DAIEQRSTEVLLQMGDPAIITDQARFQRLAKAHAELEPVVEAYQ 52 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSND 116 + + L D L + + + + L+ + + E L AD Sbjct: 53 QYRKLLQDLEETKALLHDGTEDDVRELAEAELKELAVKREKLEEELTLLLLPRDPADEKS 112 Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 LEV AGAGG E+ +A L+RMY R+AE R +K E L G+K A L I+G Sbjct: 113 IILEVRAGAGGDEAALFAAELVRMYGRYAELRGWKVEMLSSSQTGVGGVKEAILSIEGRG 172 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 AY LK E GVHR+ R+ +S+ R HTS ++ V P + +EI+I D RID +R++ Sbjct: 173 AYSRLKFESGVHRVQRVPVTESSGRIHTSTVTVAVLP-EAEDVEIQIDPKDLRIDVFRST 231 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQ VNTTDSAVRITH+PTG+VV CQ E+SQHKN+A+A +LRA+L LE ++ A Sbjct: 232 GPGGQSVNTTDSAVRITHLPTGMVVSCQDEKSQHKNRAKAMKVLRARL--LEAATAQQAA 289 Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 I ++ + ++G G +IR+Y P V D R + S +L+G++++ + A A Sbjct: 290 EISQARRQQVGTGDRSERIRTYNF-PQGRVTDHRIGLTLHSLPRILEGEIEELIGALAAS 348 Query: 354 KK 355 + Sbjct: 349 DQ 350 >gi|284007355|emb|CBA72733.1| peptide chain release factor 1 [Arsenophonus nasoniae] Length = 349 Score = 222 bits (565), Expect = 8e-56, Method: Composition-based stats. Identities = 113/337 (33%), Positives = 174/337 (51%), Gaps = 7/337 (2%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 +R + D + + + L +E L + + + D L + Sbjct: 1 MQERYEEIQAHLVDAEVIADQERFRALSKEYAQLTDVTKCFQSWRAVQQDIETAETLLHD 60 Query: 79 EDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 + + QE +R + + Q L D + +LE+ AG GG E+ +A L Sbjct: 61 PEMREMAQEELKEAKKRNEEFEQQLQILLLPKDPDDEKNCFLEIRAGTGGDEAAIFAGDL 120 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY R+AE R+++ E + +GE G K + G + YG LK E G HR+ R+ + Sbjct: 121 FRMYNRYAESRRWRIEVMNASEGEHGGYKEIIAKVSGDSVYGRLKFESGGHRVQRVPETE 180 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 S R HTS ++ + + + +I+ SD RIDT+R+SGAGGQHVNTTDSA+RITHIPT Sbjct: 181 SQGRIHTSACTVAILAEIPATELPDINPSDLRIDTFRSSGAGGQHVNTTDSAIRITHIPT 240 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314 G+VV+CQ ERSQHKNKA+A ++L A++ E+QKR E + +G G +IR+ Sbjct: 241 GIVVECQDERSQHKNKAKALSVLAARIRAAEVQKRRE--AEASERRNLLGSGDRSDRIRT 298 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 Y P + D R N+ +V++G LD ++ + Sbjct: 299 YNF-PQGRITDHRINLTLYRLDEVIEGKLDMLIQPII 334 >gi|325291372|ref|YP_004267553.1| bacterial peptide chain release factor 1 (bRF-1) [Syntrophobotulus glycolicus DSM 8271] gi|324966773|gb|ADY57552.1| bacterial peptide chain release factor 1 (bRF-1) [Syntrophobotulus glycolicus DSM 8271] Length = 356 Score = 222 bits (565), Expect = 8e-56, Method: Composition-based stats. Identities = 113/347 (32%), Positives = 185/347 (53%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72 + ++ + +P ++ + + + + + + +E ++ +L D L Sbjct: 5 LEEIEKKYDEITELLSNPEIFSDQAAYQKNAKAQAAIAEIVEGFREYKEIFRQLKDAQAL 64 Query: 73 LELALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LE L+ + Q D R + E + L D + +E+ AGAGG E+ Sbjct: 65 LEEELDSEMREFAQSEIDELQNRKEEYEEKLKILLLPKDPNDEKNVIMEIRAGAGGEEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L +MY+R+AE++ +KTE L + G K +++G AY LK E GVHR+ Sbjct: 125 LFAGDLYKMYSRYAEEQGWKTEMLSASYTDIGGFKEIIFMVEGRGAYSMLKYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ V P + ++IEI+ ++ RID + +SG GGQ VNTT SAVR Sbjct: 185 RIPSTESGGRIHTSTATVAVLP-EAEDVDIEINPNEIRIDIFCSSGPGGQSVNTTQSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTG+VV CQ E+SQHKNK +A +LRA+L LE ++E + I + K+++G G Sbjct: 244 VTHIPTGIVVSCQDEKSQHKNKDKALKVLRARL--LEKAQQEAMGEIAQERKSQVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + ++L GD+ + + A +A + Sbjct: 302 SERIRTYNF-PQGRVSDHRIGLTLHKLENILLGDIQEIIDALIAKDQ 347 >gi|332653076|ref|ZP_08418821.1| peptide chain release factor 1 [Ruminococcaceae bacterium D16] gi|332518222|gb|EGJ47825.1| peptide chain release factor 1 [Ruminococcaceae bacterium D16] Length = 354 Score = 222 bits (565), Expect = 8e-56, Method: Composition-based stats. Identities = 100/344 (29%), Positives = 168/344 (48%), Gaps = 8/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + S + + +++ L +E+ L + + +L L Sbjct: 5 LAAIEAKYSQIEARLSASETYEDPALVAKLNKEQTELQPLVETYRTYLRTQQSHLEAESL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE + + L D + +E+ AG GG E+ +A Sbjct: 65 LSDPEMKELAQEEWRQSKEDLERLEHQLKILLLPKDPNDDKNVIVEIRAGVGGEEAALFA 124 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 + L RMY+ +AE +KTE + + E G+K + I+G AY LK E GVHR+ R+ Sbjct: 125 HSLYRMYSMFAEANHWKTEVDSVSETELGGVKEISFTIEGDGAYSRLKFESGVHRVQRVP 184 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P ++ + I+ +D + +R+SGAGGQHVN T SAVR+ H Sbjct: 185 ETESGGRVHTSTVTVAVLPEMETADVQ-INPADIEMQVFRSSGAGGQHVNKTSSAVRLIH 243 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 PTG VV+CQQERSQ +N+ +A +L ++LYE E +K + ++++G G + Sbjct: 244 KPTGTVVECQQERSQFQNRDKAMRILASRLYEAEQEKI--SSEYTAQRRSQVGSGMRNER 301 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R + ++++GDL++ + A A + Sbjct: 302 IRTYNF-PQGRVTDHRIGLTLYKIDNIMNGDLNEVIDALAAADQ 344 >gi|294782570|ref|ZP_06747896.1| peptide chain release factor 1 [Fusobacterium sp. 1_1_41FAA] gi|294481211|gb|EFG28986.1| peptide chain release factor 1 [Fusobacterium sp. 1_1_41FAA] Length = 357 Score = 222 bits (565), Expect = 8e-56, Method: Composition-based stats. Identities = 120/351 (34%), Positives = 184/351 (52%), Gaps = 11/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + V R LN P + + + + + + KE + + D Sbjct: 1 MFDKLEEVVARYEELNQMLVSPEVLADSKKMIECNKAINEITEIVEKYKEYKKYVDDIEF 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGG 127 + E E D + + ++ L+ + ++ + L + D + +E+ GAGG Sbjct: 61 IKESFKTEKDADMKEMLNEELKEAEEKLPSLEEELKILLLPKDKNDDKNVIVEIRGGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE+RK+K E +E DGE G+K I G AY LK E GV Sbjct: 121 DEAALFAADLFRMYSRYAERRKWKIEIIEKQDGELNGLKEVAFTIIGLGAYSRLKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +++ R HTS +++ V P V+D E+ + D +IDTYR+ GAGGQHVN TD Sbjct: 181 HRVQRVPKTEASGRIHTSTATVAVLPEVEDIQEVIVDPKDLKIDTYRSGGAGGQHVNMTD 240 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VVQCQ ERSQ KN+ +A L KLYE+E +K+ + ++G Sbjct: 241 SAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQRSEVE--SERRLQVG 298 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P + D R + LDGD+D+ + A + + Sbjct: 299 TGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQ 348 >gi|229076544|ref|ZP_04209504.1| Peptide chain release factor 1 [Bacillus cereus Rock4-18] gi|229099762|ref|ZP_04230687.1| Peptide chain release factor 1 [Bacillus cereus Rock3-29] gi|229105922|ref|ZP_04236546.1| Peptide chain release factor 1 [Bacillus cereus Rock3-28] gi|229118825|ref|ZP_04248174.1| Peptide chain release factor 1 [Bacillus cereus Rock1-3] gi|228664626|gb|EEL20119.1| Peptide chain release factor 1 [Bacillus cereus Rock1-3] gi|228677496|gb|EEL31749.1| Peptide chain release factor 1 [Bacillus cereus Rock3-28] gi|228683651|gb|EEL37604.1| Peptide chain release factor 1 [Bacillus cereus Rock3-29] gi|228706577|gb|EEL58790.1| Peptide chain release factor 1 [Bacillus cereus Rock4-18] Length = 358 Score = 221 bits (564), Expect = 8e-56, Method: Composition-based stats. Identities = 117/347 (33%), Positives = 179/347 (51%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72 R LN DP + + + + +E+ + + +E +D +L D + Sbjct: 8 LQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQLRDAKAM 67 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LE L+ D +++E L+ + + + + + D + +EV AGG E+ Sbjct: 68 LEDKLDADMREMVKEEVSELEGQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAGGDEAA 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AE + +KTE +E E G K +I G A+ LK E G HR+ Sbjct: 128 LFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + +EI I E D R+DT+ +SG GGQ VNTT SAVR Sbjct: 188 RVPETESGGRIHTSTATVAVLP-EAEEVEITIHEKDVRVDTFASSGPGGQSVNTTMSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K +G G Sbjct: 247 LTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LDDF+ A + + Sbjct: 305 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350 >gi|206580278|ref|YP_002237908.1| peptide chain release factor 1 [Klebsiella pneumoniae 342] gi|288934821|ref|YP_003438880.1| peptide chain release factor 1 [Klebsiella variicola At-22] gi|290508964|ref|ZP_06548335.1| peptide chain release factor 1 [Klebsiella sp. 1_1_55] gi|238058716|sp|B5XW51|RF1_KLEP3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|206569336|gb|ACI11112.1| peptide chain release factor 1 [Klebsiella pneumoniae 342] gi|288889530|gb|ADC57848.1| peptide chain release factor 1 [Klebsiella variicola At-22] gi|289778358|gb|EFD86355.1| peptide chain release factor 1 [Klebsiella sp. 1_1_55] Length = 360 Score = 221 bits (564), Expect = 8e-56, Method: Composition-based stats. Identities = 111/337 (32%), Positives = 175/337 (51%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + + + D + Sbjct: 9 LEALYERHEEVQALLGDAATIADQDKFRALSREYAQLSDVARCYTDWRQVQEDIETAQMM 68 Query: 76 ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE + + + Q L D +A++EV AG GG E+ +A Sbjct: 69 LDDPEMREMAQEELRDAKEKGDQLEQQLQVLLLPKDPDDERNAFVEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E L ++GE G K G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESRRWQVEILSANEGEHGGFKEVIAKFSGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAEMPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ + ++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIE 342 >gi|153874211|ref|ZP_02002515.1| Peptide chain release factor 1 [Beggiatoa sp. PS] gi|152069325|gb|EDN67485.1| Peptide chain release factor 1 [Beggiatoa sp. PS] Length = 361 Score = 221 bits (564), Expect = 8e-56, Method: Composition-based stats. Identities = 113/347 (32%), Positives = 180/347 (51%), Gaps = 10/347 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +N RL LN +P + N + + L +E + + + + +E+ Sbjct: 9 LENLSDRLQELNVLLTEPEIINNQNQFRSLSKEYAEIQPIVECFDKYRQNSETQATAIEM 68 Query: 76 ALEEDDCSILQETS---DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 +ED + Q L D+++ +LEV AG GG E+ Sbjct: 69 LRDEDADMRALAEEELSQAQTENERLDNELQLLLLPKDPDDNSNTFLEVRAGTGGDEAAL 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L+RMY+R+AE++ ++ E L + GE G K + I G Y K E G HR+ R Sbjct: 129 FAGDLVRMYSRYAEQQNWQIEILSQNHGEHGGFKEIIMRITGEGVYSRFKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ + P V++ EIEI+ +D R DT+RASGAGGQHVN TDSA+R+ Sbjct: 189 VPETESQGRIHTSACTVAIMPEVEEVEEIEINNADIREDTFRASGAGGQHVNKTDSAIRL 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+V++CQ ERSQHKN+A+A ++L+A+L E +++ E+ + +G G Sbjct: 249 THLPTGIVIECQDERSQHKNRARAKSLLQARLLAAERERQRAEK--AETRRNLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 +IR+Y P + D R + D+L G+LDD ++ + Sbjct: 307 ERIRTYNF-PQGRITDHRIGLTLYKLDDILKQGNLDDLIEPLKREHQ 352 >gi|157960584|ref|YP_001500618.1| peptide chain release factor 2 [Shewanella pealeana ATCC 700345] gi|157845584|gb|ABV86083.1| peptide chain release factor 2 [Shewanella pealeana ATCC 700345] Length = 293 Score = 221 bits (564), Expect = 8e-56, Method: Composition-based stats. Identities = 155/291 (53%), Positives = 206/291 (70%), Gaps = 1/291 (0%) Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L D LLELA+EE+D + + LQ ++ +E +F + S D++D YL++ Sbjct: 1 MDSGLEDIEGLLELAVEENDEETFNDAAAELQGLEKRLEELEFRRMFSKPHDASDCYLDI 60 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +G+GGTE+QDWANM+LRM+ RW E +K E +E+ G+ AGIK AT+ G A+G L Sbjct: 61 QSGSGGTEAQDWANMVLRMFLRWGEAHDYKPELIEVTAGDVAGIKGATIKFTGEYAFGSL 120 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQ Sbjct: 121 RTETGVHRLVRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQ 180 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SA+RITH+PT VVQCQ +RSQHKN+ A L+AKLYELE+ K+ E Sbjct: 181 HVNKTESAIRITHLPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNADKQAAED 240 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 241 AKSDIGWGSQIRSYVLDD-ARIKDLRTGVENRNTQSVLDGDLDKFIEASLK 290 >gi|30023360|ref|NP_834991.1| peptide chain release factor 1 [Bacillus cereus ATCC 14579] gi|206970257|ref|ZP_03231210.1| peptide chain release factor 1 [Bacillus cereus AH1134] gi|218236058|ref|YP_002370106.1| peptide chain release factor 1 [Bacillus cereus B4264] gi|228924065|ref|ZP_04087341.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228955577|ref|ZP_04117579.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228961593|ref|ZP_04123202.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar pakistani str. T13001] gi|229051000|ref|ZP_04194549.1| Peptide chain release factor 1 [Bacillus cereus AH676] gi|229072796|ref|ZP_04205995.1| Peptide chain release factor 1 [Bacillus cereus F65185] gi|229082544|ref|ZP_04215007.1| Peptide chain release factor 1 [Bacillus cereus Rock4-2] gi|229112743|ref|ZP_04242276.1| Peptide chain release factor 1 [Bacillus cereus Rock1-15] gi|229130579|ref|ZP_04259535.1| Peptide chain release factor 1 [Bacillus cereus BDRD-Cer4] gi|229147870|ref|ZP_04276211.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST24] gi|229153493|ref|ZP_04281671.1| Peptide chain release factor 1 [Bacillus cereus m1550] gi|229181577|ref|ZP_04308903.1| Peptide chain release factor 1 [Bacillus cereus 172560W] gi|229193581|ref|ZP_04320525.1| Peptide chain release factor 1 [Bacillus cereus ATCC 10876] gi|29898921|gb|AAP12192.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bacillus cereus ATCC 14579] gi|206734834|gb|EDZ52003.1| peptide chain release factor 1 [Bacillus cereus AH1134] gi|218164015|gb|ACK64007.1| peptide chain release factor 1 [Bacillus cereus B4264] gi|228589886|gb|EEK47761.1| Peptide chain release factor 1 [Bacillus cereus ATCC 10876] gi|228601945|gb|EEK59440.1| Peptide chain release factor 1 [Bacillus cereus 172560W] gi|228630097|gb|EEK86748.1| Peptide chain release factor 1 [Bacillus cereus m1550] gi|228635520|gb|EEK92009.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST24] gi|228652918|gb|EEL08800.1| Peptide chain release factor 1 [Bacillus cereus BDRD-Cer4] gi|228670724|gb|EEL26035.1| Peptide chain release factor 1 [Bacillus cereus Rock1-15] gi|228700976|gb|EEL53499.1| Peptide chain release factor 1 [Bacillus cereus Rock4-2] gi|228710287|gb|EEL62262.1| Peptide chain release factor 1 [Bacillus cereus F65185] gi|228722377|gb|EEL73773.1| Peptide chain release factor 1 [Bacillus cereus AH676] gi|228798075|gb|EEM45079.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228804105|gb|EEM50722.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228835555|gb|EEM80920.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 358 Score = 221 bits (564), Expect = 8e-56, Method: Composition-based stats. Identities = 116/347 (33%), Positives = 179/347 (51%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72 R LN DP + + + + +E+ + + +E +D +L D + Sbjct: 8 LQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQLKDAKAM 67 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LE L+ + +++E L+ + + + + D + +EV AGG E+ Sbjct: 68 LEDKLDAEMREMVKEEVSELESQDKTLSERLKILLVPKDPNDDKNVIVEVRGAAGGDEAA 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AE + +KTE +E E G K +I G A+ LK E G HR+ Sbjct: 128 LFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + +EI+I E D R+DT+ +SG GGQ VNTT SAVR Sbjct: 188 RVPETESGGRIHTSTATVAVLP-EAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTMSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K +G G Sbjct: 247 LTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LDDF+ A + + Sbjct: 305 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350 >gi|205352556|ref|YP_002226357.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|238690491|sp|B5R924|RF1_SALG2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|205272337|emb|CAR37217.1| Peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326627616|gb|EGE33959.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 360 Score = 221 bits (564), Expect = 8e-56, Method: Composition-based stats. Identities = 113/337 (33%), Positives = 177/337 (52%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE ++ + + Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A+++ E KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ + ++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIE 342 >gi|56421913|ref|YP_149231.1| peptide chain release factor 1 [Geobacillus kaustophilus HTA426] gi|261420783|ref|YP_003254465.1| peptide chain release factor 1 [Geobacillus sp. Y412MC61] gi|297531578|ref|YP_003672853.1| peptide chain release factor 1 [Geobacillus sp. C56-T3] gi|319768453|ref|YP_004133954.1| peptide chain release factor 1 [Geobacillus sp. Y412MC52] gi|61214572|sp|Q5KUH3|RF1_GEOKA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|56381755|dbj|BAD77663.1| peptide chain release factor 1 (RF-1) in translation [Geobacillus kaustophilus HTA426] gi|261377240|gb|ACX79983.1| peptide chain release factor 1 [Geobacillus sp. Y412MC61] gi|297254830|gb|ADI28276.1| peptide chain release factor 1 [Geobacillus sp. C56-T3] gi|317113319|gb|ADU95811.1| peptide chain release factor 1 [Geobacillus sp. Y412MC52] Length = 358 Score = 221 bits (564), Expect = 8e-56, Method: Composition-based stats. Identities = 117/351 (33%), Positives = 181/351 (51%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + QR LN DP + + + + +E+ L+ + +E + Sbjct: 1 MFDRLEAVEQRYEKLNELLMDPDVINDPKKLRDYSKEQADLEETVQTYREYKSVREQLAE 60 Query: 72 LLELALEEDDCSILQE----TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + E+ + + + + +R + VE + L D + +E+ A AGG Sbjct: 61 AKAMLEEKLEPELREMVKEEIGELEEREEALVEKLKVLLLPKDPNDEKNVIMEIRAAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR+AE + +KTE +E G K +I G AY LK E G Sbjct: 121 EEAALFAGDLYRMYTRYAESQGWKTEVIEASPTGLGGYKEIIFMINGKGAYSKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ P + IE+EI+E D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLP-EMEEIEVEINEKDIRVDTFASSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+VV CQ E+SQ KNK +A +LRA++Y+ ++E A ++ K +G Sbjct: 240 SAVRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLRARIYDKY--QQEARAEYDQTRKQAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + VLDG LD+ ++A + + Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQVLDGHLDEIIEALILDDQ 347 >gi|297192053|ref|ZP_06909451.1| peptide chain release factor 1 [Streptomyces pristinaespiralis ATCC 25486] gi|197719497|gb|EDY63405.1| peptide chain release factor 1 [Streptomyces pristinaespiralis ATCC 25486] Length = 359 Score = 221 bits (564), Expect = 8e-56, Method: Composition-based stats. Identities = 118/350 (33%), Positives = 174/350 (49%), Gaps = 16/350 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + + + L K DP + + A+ L + L + + + D Sbjct: 1 MFEAVEELIGEHADLEKKLADPSVHADQANARKLNKRYAELTPIVGTYRAWKRTGEDIGT 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EL +DD E D + + E + + +D D LEV AGAGG ES Sbjct: 61 AREL--AQDDPDFAAEVKDLEKEREALTEKLRLLLVPRDPSDDKDVILEVKAGAGGDESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG----------PNAYGWL 181 +A LLRMY R+AE+ +KTE ++ + E G K + +K + L Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVAVKTKGGQGATEPGQGVWARL 178 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHR+ R+ +S R HTS + + V P + I++EI +D RID YR+SG GGQ Sbjct: 179 KYEGGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEIDVEIHANDLRIDVYRSSGPGGQ 237 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PTG+V CQ E+SQ +NK QA +LR++L ++ E A Sbjct: 238 SVNTTDSAVRITHLPTGIVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAESKAADARR 297 Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 S+ + +IR+Y P + D R + + VLDGDLD ++A Sbjct: 298 SQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLDAVIQAC 346 >gi|119361535|sp|Q24ML9|RF1_DESHY RecName: Full=Peptide chain release factor 1; Short=RF-1 Length = 355 Score = 221 bits (564), Expect = 8e-56, Method: Composition-based stats. Identities = 109/345 (31%), Positives = 175/345 (50%), Gaps = 11/345 (3%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 +R L DP + N E + + + + + + +E + + L Sbjct: 7 EIERRYDELTQLLSDPEVIGNQSEWQKYAKAQAGMTDIVEAFREYSEVVKHLEETQGLLE 66 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E+ D + L+ + + + + L D + +E+ AGAGG E+ + Sbjct: 67 EKLDPEFKEMAELELEELTEKRDELEEKMRILLLPKDPNDDKNVIMEIRAGAGGEEAALF 126 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A L RMYT++AE++ ++TE L + G K LI+G AY LK E GVHR+ R+ Sbjct: 127 AGDLYRMYTKYAEQQGWRTELLSASYTDIGGFKEIIFLIEGQGAYSKLKFESGVHRVQRV 186 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +S R HTS +++ V P + +++ I+ +D RID + +SG GGQ VNTT SAVRIT Sbjct: 187 PTTESGGRIHTSTTTVAVLP-EAEEVDVAINPNDLRIDIFCSSGPGGQSVNTTQSAVRIT 245 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H+PTG VV CQ E+SQ KNK +A +LRA+L LE + E + + ++++G G Sbjct: 246 HVPTGTVVSCQDEKSQLKNKEKALRVLRARL--LERAQEEAMGELASERRSQVGTGDRSE 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G+LD+ + A + + Sbjct: 304 RIRTYNF-PQGRVTDHRIGLTLHRLDSILLGELDEVINALITTDQ 347 >gi|313636275|gb|EFS02086.1| peptide chain release factor 1 [Listeria seeligeri FSL S4-171] Length = 358 Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats. Identities = 106/347 (30%), Positives = 178/347 (51%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72 R LN DP + + + L +E+ + + +E ++ ++ + L Sbjct: 5 LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVEAYREYKNVNAQIDETKEL 64 Query: 73 LELALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L L+++ + +E LQ+ K E + + D + LE+ AGG E+ Sbjct: 65 LSEKLDDEMREMAKEEFAELQKEKAELEERLKLLLVPKDPNDDKNVILEIRGAAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+++AE R +K E ++ + G K ++ G +A+ +K E G HR+ Sbjct: 125 LFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ + P + +EIE+ + D R DT+ ++GAGGQ VNTT SAVR Sbjct: 185 RVPETESGGRIHTSTATVAILP-EAEEVEIELHDKDIRTDTFASTGAGGQSVNTTMSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTG+VV Q ERSQ KNK +A +LRA++Y+ +RE + K+ +G G Sbjct: 244 LTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKF--EREAREEYDANRKSAVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +++G LD+ + A + + Sbjct: 302 SERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEVIDALILEDQ 347 >gi|289435805|ref|YP_003465677.1| peptide chain release factor 1 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172049|emb|CBH28595.1| peptide chain release factor 1 [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 358 Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats. Identities = 106/347 (30%), Positives = 178/347 (51%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72 R LN DP + + + L +E+ + + +E ++ ++ + L Sbjct: 5 LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVEAYREYKNVNAQIDETKEL 64 Query: 73 LELALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L L+++ + +E LQ+ K E + + D + LE+ AGG E+ Sbjct: 65 LSEKLDDEMREMAKEEFTELQKEKAELEERLKLLLVPKDPNDDKNVILEIRGAAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+++AE R +K E ++ + G K ++ G +A+ +K E G HR+ Sbjct: 125 LFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ + P + +EIE+ + D R DT+ ++GAGGQ VNTT SAVR Sbjct: 185 RVPETESGGRIHTSTATVAILP-EAEEVEIELHDKDIRTDTFASTGAGGQSVNTTMSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTG+VV Q ERSQ KNK +A +LRA++Y+ +RE + K+ +G G Sbjct: 244 LTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKF--EREAREEYDANRKSAVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +++G LD+ + A + + Sbjct: 302 SERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQ 347 >gi|283832855|ref|ZP_06352596.1| peptide chain release factor 1 [Citrobacter youngae ATCC 29220] gi|291071455|gb|EFE09564.1| peptide chain release factor 1 [Citrobacter youngae ATCC 29220] Length = 360 Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats. Identities = 112/337 (33%), Positives = 174/337 (51%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ ++ + + Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQDELREAKEKCEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESRRWRVEIMSASEGEHGGFKEVIAKISGEGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + D+ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ +R++ + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVARRQQ--AEASERRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ + ++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLDMLIE 342 >gi|332299913|ref|YP_004441834.1| Peptide chain release factor 1 [Porphyromonas asaccharolytica DSM 20707] gi|332176976|gb|AEE12666.1| Peptide chain release factor 1 [Porphyromonas asaccharolytica DSM 20707] Length = 368 Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats. Identities = 98/355 (27%), Positives = 162/355 (45%), Gaps = 20/355 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLIL 72 + V R L T DP++ + L +E HL + K++ + + Sbjct: 8 IEALVARHEELETLITDPNVIADGRRFATLSKEYTHLGEILKAGGQYKQLLTQQEEAEST 67 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGTES 130 L+ +++ + + ++ ++ + L + D +A LE+ AG GG E+ Sbjct: 68 LQDTDSDEELKAMARELLAEAKEEIPKMEEEIKLLLLPNDPEDDKNAILELRAGTGGDEA 127 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY+R+ E + + +G G K L + G YG LK E GVHR+ Sbjct: 128 ALFAGDLFRMYSRYCETKGWNVTVSSYTEGGTGGYKEIVLNVTGTGVYGTLKYESGVHRV 187 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P D I+E + + DT+R+SGAGGQ+VN +S V Sbjct: 188 QRVPQTETQGRIHTSAATVAVLPEADKFEVN-INEGEIKWDTFRSSGAGGQNVNKVESGV 246 Query: 251 RITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 R+ + + ++C + R Q KNK +A + LR +Y+ E QK I I Sbjct: 247 RLHYPWRNPNTGVVEDITIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDEIASRR 304 Query: 303 KTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT + G + IR+Y P V D R + + VL GDL + A + + Sbjct: 305 KTMVSTGDRSAKIRTYNF-PQGRVTDHRIGLTVHNLPGVLGGDLQPIIDALIVAE 358 >gi|85860527|ref|YP_462729.1| peptide chain release factor 1 [Syntrophus aciditrophicus SB] gi|119361624|sp|Q2LWU9|RF1_SYNAS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|85723618|gb|ABC78561.1| bacterial peptide chain release factor 1 (rf-1) [Syntrophus aciditrophicus SB] Length = 357 Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats. Identities = 109/351 (31%), Positives = 173/351 (49%), Gaps = 12/351 (3%) Query: 13 LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F R L DP + + +E L + + ++ + Sbjct: 1 MFSKLKEVESRYLELEKLLSDPTVVTRQSLYQKYAKEHADLRDLVEVFRKYEKVGAAIEE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL---LSGEADSNDAYLEVHAGAGGT 128 +L +D+ + + + ++ + D + +LE+ AG GG Sbjct: 61 AQQLLRGDDEELKEIAREELPELRQHLAGLEERLKVLLLPRDLNDDRNVFLEIRAGTGGD 120 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDG-EEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ + L RMY R+AE R++K E + G K I G AY LK E GV Sbjct: 121 EAGLFVGDLFRMYARYAEMRRWKVEVISSTPSSGVGGFKEIIASIAGQGAYSQLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS ++ + P D +E+ I +D RID + +SG GGQ VNTTD Sbjct: 181 HRVQRVPVTEAQGRIHTSAVTVAIMP-EADEVEVTIDPNDLRIDVFHSSGHGGQSVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VV CQ E+SQ KNKA+A +LRA+L ++ ++K+ + I E+ K+++G Sbjct: 240 SAVRITHLPTGLVVSCQDEKSQLKNKAKALKVLRARLLDIMVKKQSDE--ISEARKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + S ++L GD+ +F+ A A + Sbjct: 298 SGDRSERIRTYNF-PQGRVTDHRVGLTLYSLENILGGDIQEFIDALTAYFQ 347 >gi|313631914|gb|EFR99059.1| peptide chain release factor 1 [Listeria seeligeri FSL N1-067] Length = 358 Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats. Identities = 106/347 (30%), Positives = 178/347 (51%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72 R LN DP + + + L +E+ + + +E ++ ++ + L Sbjct: 5 LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVEAYREYKNVNAQIDETKEL 64 Query: 73 LELALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L L+++ + +E LQ+ K E + + D + LE+ AGG E+ Sbjct: 65 LSEKLDDEMREMAKEEFAELQKEKAELEERLKLLLVPKDPNDDKNVILEIRGAAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+++AE R +K E ++ + G K ++ G +A+ +K E G HR+ Sbjct: 125 LFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ + P + +EIE+ + D R DT+ ++GAGGQ VNTT SAVR Sbjct: 185 RVPETESGGRIHTSTATVAILP-EAEEVEIELHDKDIRTDTFASTGAGGQSVNTTMSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTG+VV Q ERSQ KNK +A +LRA++Y+ +RE + K+ +G G Sbjct: 244 LTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKF--EREAREEYDANRKSAVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +++G LD+ + A + + Sbjct: 302 SERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQ 347 >gi|229525316|ref|ZP_04414721.1| peptide chain release factor 2 [Vibrio cholerae bv. albensis VL426] gi|229338897|gb|EEO03914.1| peptide chain release factor 2 [Vibrio cholerae bv. albensis VL426] Length = 299 Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats. Identities = 166/297 (55%), Positives = 214/297 (72%), Gaps = 1/297 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + I ++ + D LLELA+E +D E L + +E +F + SG+ DS+ Sbjct: 1 MDTIDQLDRGVDDVEGLLELAIEAEDQETFDEIGPELDELGARLEQLEFRRMFSGDHDSS 60 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 D YL++ AG+GGTE+QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G Sbjct: 61 DCYLDLQAGSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGD 120 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 AYGWL+ E GVHRLVR SP+DS RRHTSF+S ++YP VD++I+IEI+ +D RID YRA Sbjct: 121 YAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRA 180 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK QA LRAKL+ELELQK+ Sbjct: 181 SGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAE 240 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E +K++IGWG QIRSYVL +KDLRT IE + VLDGDLD F++A+L Sbjct: 241 KQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDKFIEASLK 296 >gi|149177843|ref|ZP_01856442.1| peptide chain release factor 2 (RF-2) [Planctomyces maris DSM 8797] gi|148843333|gb|EDL57697.1| peptide chain release factor 2 (RF-2) [Planctomyces maris DSM 8797] Length = 331 Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats. Identities = 152/326 (46%), Positives = 214/326 (65%), Gaps = 2/326 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 W N +A+ L+ E Q + + + ++ + D +L+E EE + E S Sbjct: 1 MGAAGFWDNQEKAQGLVNEMQQIQLVVKPLTQLVEGAEDLEVLIEFIEEEGSEDSIPELS 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +R++ +E+ + ++++S D + AYL + AG GGT+S DWA MLLRMY RW E+R Sbjct: 61 ATAERLESILEHLELQAMMSAPEDGSAAYLSIQAGEGGTDSSDWAEMLLRMYLRWCERRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F E L+ D EEAGI+SAT+ I+G AYG+LKGE G HRL+RISP+DS RRHTSF+++ Sbjct: 121 FNVELLDRSDAEEAGIRSATIRIEGDYAYGYLKGETGNHRLIRISPFDSAGRRHTSFAAV 180 Query: 210 WVYPVVDDSIEIEISE-SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 V P + + EIEIS D R DTYRASGAGGQH+N TDSA+R+TH+ + VVVQCQ RS Sbjct: 181 DVSPDMGEVAEIEISWDQDVREDTYRASGAGGQHINKTDSAIRLTHLESNVVVQCQNNRS 240 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ-IRSYVLQPYQMVKDLR 327 QHKN+A+A ML++KL+++E +KR+ K++IG+G Q +R+YVL P Q VKD R Sbjct: 241 QHKNRAEARKMLKSKLFQIEQEKRDAELAAKRGGKSKIGFGGQTVRNYVLHPDQYVKDAR 300 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAI 353 T + +P +LDGDLD F++A L Sbjct: 301 TGFKAGNPGPILDGDLDGFLEAFLRW 326 >gi|75762680|ref|ZP_00742519.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74489826|gb|EAO53203.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 358 Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats. Identities = 116/347 (33%), Positives = 180/347 (51%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72 R LN DP + + + + +E+ + + +E +D +L D + Sbjct: 8 LQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQETVEVYREYKDVREQLKDAKAM 67 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LE L+ + +++E L+ + + + + + D + +EV AGG E+ Sbjct: 68 LEEKLDAEMRDMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAGGDEAA 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AE + +KTE +E E G K +I G A+ LK E G HR+ Sbjct: 128 LFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKRAFAKLKFENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + +EI+I E D R+DT+ +SG GGQ VNTT SAVR Sbjct: 188 RVPETESGGRXHTSTATVAVLP-EAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTMSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K +G G Sbjct: 247 LTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LDDF+ A + + Sbjct: 305 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350 >gi|262369773|ref|ZP_06063101.1| peptide chain release factor 1 [Acinetobacter johnsonii SH046] gi|262315841|gb|EEY96880.1| peptide chain release factor 1 [Acinetobacter johnsonii SH046] Length = 362 Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats. Identities = 117/339 (34%), Positives = 168/339 (49%), Gaps = 7/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + L RE L + + D + Sbjct: 9 LDQLSDRHEELTALLADVEVISDNKRFRQLSREHSDLSEITEVWTKYKQAEADIETAEAM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + E + I + D+N AYLE+ AG GG E+ ++ Sbjct: 69 LSDPDFKEMAVEEIKENKAIIASLEADLNILMIPKDPNDANSAYLEIRAGTGGDEAAIFS 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMYT++AE + ++ E L ++GE G K L+ G YG LK E G HR+ R+ Sbjct: 129 GDLYRMYTKYAESQGWRIEVLSENEGEHGGYKEIICLVNGEGVYGRLKFESGAHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P +D +EI+ SD RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 189 ATESQGRVHTSACTVAILPEIDVDTTVEINASDLRIDTYRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG VV+CQ+ERSQHKNKA+A +L ++L + A E + +G G + Sbjct: 249 IPTGTVVECQEERSQHKNKAKAMALLASRLESAKR--AAADAATSEMRRDLVGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P + D R N+ V++GDL + + + Sbjct: 307 IRTYNY-PQGRMTDHRINLTLYKLDAVMEGDLTELLDSL 344 >gi|184154903|ref|YP_001843243.1| peptide chain release factor 1 [Lactobacillus fermentum IFO 3956] gi|238692951|sp|B2GAT1|RF1_LACF3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|183226247|dbj|BAG26763.1| peptide chain release factor 1 [Lactobacillus fermentum IFO 3956] Length = 360 Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats. Identities = 103/354 (29%), Positives = 179/354 (50%), Gaps = 12/354 (3%) Query: 10 LGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DR 65 + +FD R LN DP + + L +E L + E + Sbjct: 1 MEEIFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKEVTQT 60 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAG 124 + D+ +L + D + +E + + + +++ + + + D + +E+ Sbjct: 61 IKDDTEMLREESDPDLVEMTKEELNEAKERQAQLQDELEVLLIPKDPNDDKNIIMEIRGA 120 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG E+ +A L MY R+AEK+ + E ++ ++ E G K L+I G Y LK E Sbjct: 121 AGGDEASLFAADLYNMYVRYAEKQGWNVEVVDRNETEVGGFKEIALIITGDQVYSKLKFE 180 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G HR+ RI +S R HTS +++ V P + +++++ D R+D YR+SGAGGQH+N Sbjct: 181 NGAHRVQRIPATESAGRVHTSTATVGVMP-EAEDVDVDLDPKDIRVDVYRSSGAGGQHIN 239 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T SAVR+TH+PTG+VV Q ERSQ +N+A+A +L+A++Y+ +++E + K Sbjct: 240 KTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMQILKARVYDYY--QQQEQSEYDAQRKN 297 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IG G +IR+Y P V D R + ++ GDL++ +++ + + Sbjct: 298 AIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGDLEEIIESLIIADQ 350 >gi|294507807|ref|YP_003571865.1| peptide chain release factor RF-2 [Salinibacter ruber M8] gi|294344135|emb|CBH24913.1| peptide chain release factor RF-2 [Salinibacter ruber M8] Length = 349 Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats. Identities = 148/335 (44%), Positives = 211/335 (62%), Gaps = 8/335 (2%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 LN + DP W + A+ + + + I ++++++ D L L+ E + Sbjct: 4 EELNQERMDPDFWDDPDRAREIEKRIAREEEWIEAWEDVKEQAEDIETLQLLSEE-EGED 62 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 + E +R++ +++ + ESLL D DA +E++ GAGGTESQDWA MLLRMY R Sbjct: 63 MSDEIDAEARRLEQKLDRLELESLLDDPDDERDAIVEINPGAGGTESQDWAEMLLRMYMR 122 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 WAE + + E + GEEAGIKSATL ++G +AYG LK E GVHRLVRISP+D++SRRH Sbjct: 123 WAEDQDYDVELVHQQPGEEAGIKSATLNVQGRHAYGRLKSETGVHRLVRISPFDADSRRH 182 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH-------IP 256 TSF+S++VYP VDDSI +++SE + + T+R+ G GGQHVN ++ VR+ Sbjct: 183 TSFASVFVYPEVDDSIGVDLSEGEIELQTFRSGGKGGQHVNKVETGVRLIWTGTLSNGEE 242 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316 T V C QERSQH+N+ +A ML++++Y+ E + +EE ESSK I WG QIRSYV Sbjct: 243 TTVRAACTQERSQHQNRRRAREMLKSRIYQAERELKEEEKERLESSKKSIEWGSQIRSYV 302 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 L PY+MV D RT+ ++ VL+G LD F+KA L Sbjct: 303 LHPYKMVNDHRTDTKRNDAEAVLEGGLDPFIKAYL 337 >gi|260663282|ref|ZP_05864173.1| peptide chain release factor 1 [Lactobacillus fermentum 28-3-CHN] gi|260552134|gb|EEX25186.1| peptide chain release factor 1 [Lactobacillus fermentum 28-3-CHN] Length = 362 Score = 221 bits (564), Expect = 9e-56, Method: Composition-based stats. Identities = 103/355 (29%), Positives = 179/355 (50%), Gaps = 12/355 (3%) Query: 9 CLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---D 64 + +FD R LN DP + + L +E L + E + Sbjct: 2 EMEEIFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKEVTQ 61 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHA 123 + D+ +L + D + +E + + + +++ + + + D + +E+ Sbjct: 62 TIKDDTEMLREESDPDLVEMTKEELNETKERQAQLQDELEVLLIPKDPNDDKNIIMEIRG 121 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 AGG E+ +A L MY R+AEK+ + E ++ ++ E G K L+I G Y LK Sbjct: 122 AAGGDEASLFAADLYNMYVRYAEKQGWNVEVVDRNETEVGGFKEIALIITGDQVYSKLKF 181 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G HR+ RI +S R HTS +++ V P + +++++ D R+D YR+SGAGGQH+ Sbjct: 182 ENGAHRVQRIPATESAGRVHTSTATVGVMP-EAEDVDVDLDPKDIRVDVYRSSGAGGQHI 240 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SAVR+TH+PTG+VV Q ERSQ +N+A+A +L+A++Y+ +++E + K Sbjct: 241 NKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMQILKARVYDYY--QQQEQSEYDAQRK 298 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IG G +IR+Y P V D R + ++ GDL++ +++ + + Sbjct: 299 NAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGDLEEIIESLIIADQ 352 >gi|19704667|ref|NP_604229.1| peptide chain release factor 1 [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|22096034|sp|Q8R5W0|RF1_FUSNN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|19714975|gb|AAL95528.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 365 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 121/359 (33%), Positives = 185/359 (51%), Gaps = 13/359 (3%) Query: 7 LNCLGG--LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + L G +FD + V R LN P + + + + + + KE + Sbjct: 1 MINLRGVKMFDKLEEVVARYDELNKMLVSPEVLADSKKMIECNKAINEITEIVEKYKEYK 60 Query: 64 DRLCDNLILLELALEEDDCSILQE----TSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + D + E E D + + + +++ E + L + D + + Sbjct: 61 KYVDDIEFIKESFKTEKDSDMKEMLNEELKEAEEKLPKLEEELKILLLPKDKNDDKNVIV 120 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 E+ GAGG E+ +A L RMY+R+AE++K+K E +E DGE G+K I G AY Sbjct: 121 EIRGGAGGDEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELNGLKEIAFTIIGLGAYS 180 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 LK E GVHR+ R+ +++ R HTS +++ V P V+D E+ + D +IDTYR+ GAG Sbjct: 181 RLKFESGVHRVQRVPKTEASGRIHTSTATVAVLPEVEDIQEVTVDPKDLKIDTYRSGGAG 240 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQHVN TDSAVRITH+PTG+VVQCQ ERSQ KN+ +A L KLYE+E +K+ Sbjct: 241 GQHVNMTDSAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQRSEVE-- 298 Query: 300 ESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + ++G G +IR+Y P + D R + LDGD+D+ + A + + Sbjct: 299 SERRLQVGTGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQ 356 >gi|227514467|ref|ZP_03944516.1| peptide chain release factor RF1 [Lactobacillus fermentum ATCC 14931] gi|227087153|gb|EEI22465.1| peptide chain release factor RF1 [Lactobacillus fermentum ATCC 14931] gi|299782948|gb|ADJ40946.1| Peptide chain release factor 1 (RF-1) [Lactobacillus fermentum CECT 5716] Length = 362 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 103/355 (29%), Positives = 179/355 (50%), Gaps = 12/355 (3%) Query: 9 CLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---D 64 + +FD R LN DP + + L +E L + E + Sbjct: 2 EMEEIFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKEVTQ 61 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHA 123 + D+ +L + D + +E + + + +++ + + + D + +E+ Sbjct: 62 TIKDDTEMLREESDPDLVEMTKEELNEAKERQAQLQDELEVLLIPKDPNDDKNIIMEIRG 121 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 AGG E+ +A L MY R+AEK+ + E ++ ++ E G K L+I G Y LK Sbjct: 122 AAGGDEASLFAADLYNMYVRYAEKQGWNVEVVDRNETEVGGFKEIALIITGDQVYSKLKF 181 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E G HR+ RI +S R HTS +++ V P + +++++ D R+D YR+SGAGGQH+ Sbjct: 182 ENGAHRVQRIPATESAGRVHTSTATVGVMP-EAEDVDVDLDPKDIRVDVYRSSGAGGQHI 240 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T SAVR+TH+PTG+VV Q ERSQ +N+A+A +L+A++Y+ +++E + K Sbjct: 241 NKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMQILKARVYDYY--QQQEQSEYDAQRK 298 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IG G +IR+Y P V D R + ++ GDL++ +++ + + Sbjct: 299 NAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGDLEEIIESLIIADQ 352 >gi|51246578|ref|YP_066462.1| peptide chain release factor 1 [Desulfotalea psychrophila LSv54] gi|61214607|sp|Q6AJM5|RF1_DESPS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|50877615|emb|CAG37455.1| probable peptide chain release factor 1 (RF-1) [Desulfotalea psychrophila LSv54] Length = 357 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 114/352 (32%), Positives = 178/352 (50%), Gaps = 13/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 LFD +D+ R+ L K DP + + E + ++RE HL + KE + D Sbjct: 2 LFDKFDDLDNRIEHLEGKLSDPEIVNDQKEFQKVVREHAHLSKLNTVYKEYKTACQDVED 61 Query: 72 LLELALEEDDCSI-----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 + ++ + E + RI + + L D + +LE+ AGAG Sbjct: 62 NKAILHDDGEDPDLKELAKAELEELNVRIVELDKAIKIILLPKDPNDEKNTFLEIRAGAG 121 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ + L RMYTR+AE +K E + + G K LI G + LK E G Sbjct: 122 GDEAALFVADLFRMYTRFAETMGWKVEVMSSNPLGIGGFKEIIALISGEQVFSKLKYESG 181 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ ++ R HTS ++ + P + +E+ I ++ + D +R+SG GGQ VNTT Sbjct: 182 VHRVQRVPETETQGRIHTSAVTVAILP-EAEEVELHIDMNELKFDVFRSSGPGGQSVNTT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PTG+VV CQ E+SQHKNK +A +LRA+L + + A I E+ ++++ Sbjct: 241 DSAVRITHLPTGLVVICQDEKSQHKNKVKALTVLRARLLDKLESEHN--AKISEARRSQV 298 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R N+ ++ G LD+ + + + Sbjct: 299 GTGDRSERIRTYNF-PQGRVTDHRINLTLYKLETIMGGSLDEVIYPLITHDQ 349 >gi|160902302|ref|YP_001567883.1| peptide chain release factor 1 [Petrotoga mobilis SJ95] gi|160359946|gb|ABX31560.1| peptide chain release factor 1 [Petrotoga mobilis SJ95] Length = 356 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 130/345 (37%), Positives = 202/345 (58%), Gaps = 10/345 (2%) Query: 13 LFDWD-NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D+ +++ L + DP++ ++ K L +E L + + + L D Sbjct: 3 ILDFKGEVKKKIKELEKQLSDPYITNDIENLKKLGQEHSKLSELNTLFESYEQDLEDIKA 62 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTE 129 L E+ +D ++ K E K+ L E D + +E+ AG GG E Sbjct: 63 LREMYENKDVSEEEYQSMLQELEKKEEETRKKIIEGLVSQDEYDERNIIMEIRAGTGGDE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A+ L+RMY R+AE++ +K E L++++ E GIK+A L IKG AY LK E GVHR Sbjct: 123 ASLFASELMRMYLRYAERKNWKYELLDLNENELGGIKTAILKIKGQGAYRRLKYESGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S+ R HTS +++ V P I+++I+E+D RIDTYRASGAGGQ+VN TDSA Sbjct: 183 VQRVPQTESSGRIHTSTATVAVLP-EATDIDVQINENDLRIDTYRASGAGGQYVNKTDSA 241 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-- 307 VRITH+PTG+VV CQ ERSQH+NK +A N+LRAKL+E++L++++ + + + K++IG Sbjct: 242 VRITHLPTGIVVTCQNERSQHQNKEKALNILRAKLFEIKLEEQQ--SQLTQERKSQIGTA 299 Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R +++LDGDLD+ + L Sbjct: 300 QRSEKIRTYNF-PQNRVTDHRIQYTTHRINEILDGDLDEIIDKLL 343 >gi|88704041|ref|ZP_01101756.1| Peptide chain release factor 1 [Congregibacter litoralis KT71] gi|88701868|gb|EAQ98972.1| Peptide chain release factor 1 [Congregibacter litoralis KT71] Length = 361 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 114/344 (33%), Positives = 182/344 (52%), Gaps = 9/344 (2%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 L + +R ++ DP + + + + L RE L+ + E Q+ D Sbjct: 6 LLKLETLSERHEEVSALLGDPGVISDQDQFRRLSREFSELETVVKCFGEYQELQGDLEAA 65 Query: 73 LELALEEDDCSILQ---ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 + ++D E S+ R + Q L DS++ +LE+ AG GG E Sbjct: 66 ESMLADDDADMREMAKTEISEGEARREALEAELQLLLLPRDPKDSHNVFLEIRAGTGGDE 125 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + ++ L RMY+R+AE++ ++ E L GE G K I+G + Y +LK E G HR Sbjct: 126 AAIFSGDLQRMYSRFAERQGWRIEVLSERPGEHGGYKEIISRIEGSDVYAYLKFESGAHR 185 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ + ++ +EI+++D R+DTYRASGAGGQHVN TDSA Sbjct: 186 VQRVPETESQGRIHTSACTVAILAEPEELEAVEINKADLRVDTYRASGAGGQHVNKTDSA 245 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+TH+PTG+VV+CQ ERSQHKN+A+A ++L+AKL + + + + E + +G G Sbjct: 246 VRLTHLPTGIVVECQDERSQHKNRARAMSLLQAKLDSVAEE--SQASEQAEQRRNLVGTG 303 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R N+ +V+ GD++ + Sbjct: 304 DRSDRIRTYNF-PQGRVTDHRINLTLYKLDEVMAGDMEAVLGPL 346 >gi|228994048|ref|ZP_04153949.1| Peptide chain release factor 1 [Bacillus pseudomycoides DSM 12442] gi|229000115|ref|ZP_04159685.1| Peptide chain release factor 1 [Bacillus mycoides Rock3-17] gi|229007635|ref|ZP_04165229.1| Peptide chain release factor 1 [Bacillus mycoides Rock1-4] gi|228753646|gb|EEM03090.1| Peptide chain release factor 1 [Bacillus mycoides Rock1-4] gi|228759652|gb|EEM08628.1| Peptide chain release factor 1 [Bacillus mycoides Rock3-17] gi|228765696|gb|EEM14349.1| Peptide chain release factor 1 [Bacillus pseudomycoides DSM 12442] Length = 358 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 118/347 (34%), Positives = 181/347 (52%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72 R LN DP + + + + +E+ + + +E +D +L D + Sbjct: 8 LQAVENRYEKLNELLSDPEVISDSNKLREYSKEQSDMQETVEVYREYKDVRAQLRDAKAM 67 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LE L+ D +++E L+ + E+ + + + D + +EV AGG E+ Sbjct: 68 LEEKLDADMREMVKEEVSELEGQEKELSERLKILLVPKDPNDDKNVIVEVRGAAGGDEAA 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AE + +KTE +E E G K +I G A+ LK E G HR+ Sbjct: 128 LFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + +EI+I E D R+DT+ +SG GGQ VNTT SAVR Sbjct: 188 RVPETESGGRIHTSTATVAVLP-EAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTMSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Q E A ++ K +G G Sbjct: 247 LTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LDDF+ A + + Sbjct: 305 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350 >gi|311279353|ref|YP_003941584.1| peptide chain release factor 1 [Enterobacter cloacae SCF1] gi|308748548|gb|ADO48300.1| peptide chain release factor 1 [Enterobacter cloacae SCF1] Length = 360 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 110/337 (32%), Positives = 174/337 (51%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68 Query: 76 ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ + + + Q L D +A++EV AG GG E+ +A Sbjct: 69 LDDPEMREMAQDELREAKDKSEQLEQQLQVLLLPKDPDDERNAFVEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +GE G K + G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEVIAKVSGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ EI+ ++ RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAEMPEINPTELRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ + ++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIE 342 >gi|127511745|ref|YP_001092942.1| peptide chain release factor 2 [Shewanella loihica PV-4] gi|126637040|gb|ABO22683.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella loihica PV-4] Length = 293 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 157/291 (53%), Positives = 207/291 (71%), Gaps = 1/291 (0%) Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L D LLELA+EEDD + + L ++ +E +F + SG D++D YL++ Sbjct: 1 MDSGLEDVEGLLELAVEEDDEDTFNDANSELAGLEKRLEELEFRRMFSGPNDASDCYLDI 60 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +G+GGTE+QDWANM+LRMY RW E + +K E +E+ DG+ AGIK AT+ G A+G L Sbjct: 61 QSGSGGTEAQDWANMVLRMYLRWGEAKGYKPELIEVTDGDVAGIKGATIKFTGEYAFGSL 120 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS+ +RHTSF S++VYP +DDSIEI+I+ +D RID YRASGAGGQ Sbjct: 121 RTETGVHRLVRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPADLRIDVYRASGAGGQ 180 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITH+PT VVQCQ +RSQHKNK A L+AKL+ELE+ K+ E Sbjct: 181 HVNRTESAVRITHLPTNTVVQCQNDRSQHKNKDTAMKQLKAKLFELEMHKQNAEKQAAED 240 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 241 AKSDIGWGSQIRSYVLDD-ARIKDLRTGVENRNTQSVLDGDLDKFIEASLK 290 >gi|254284237|ref|ZP_04959205.1| peptide chain release factor 2 [gamma proteobacterium NOR51-B] gi|219680440|gb|EED36789.1| peptide chain release factor 2 [gamma proteobacterium NOR51-B] Length = 280 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 158/279 (56%), Positives = 204/279 (73%), Gaps = 1/279 (0%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +A EDD +Q +D++ + +E +F + SGE D +A+L++ AG+GGTE+QDWA Sbjct: 1 MAASEDDEETVQAVTDDMANLMQALEALEFRRMFSGEMDDANAFLDIQAGSGGTEAQDWA 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 MLLRMY RW E R FKT +E+ G+ AGIKSAT+ +G +GW++ E GVHRLVR S Sbjct: 61 EMLLRMYLRWGESRGFKTTLVEVSAGDVAGIKSATIQFEGEYPFGWIRTETGVHRLVRKS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+DS +RRHTSF+S++V P VDD+I+IEI+ +D R+DTYR+SGAGGQHVNTTDSAVRITH Sbjct: 121 PFDSGNRRHTSFASVFVSPEVDDNIDIEINPADLRVDTYRSSGAGGQHVNTTDSAVRITH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 +PT VV CQ ERSQH+N+ +A LRAKLYELE+QKR A E SK +IGWG QIRS Sbjct: 181 VPTNVVASCQTERSQHQNRDRAMKQLRAKLYELEIQKRNAEAQAMEDSKADIGWGSQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 YVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 241 YVLDD-SRIKDLRTGVETHNTQAVLDGDLDQFIEASLKQ 278 >gi|329770544|ref|ZP_08261922.1| peptide chain release factor 1 [Gemella sanguinis M325] gi|328836293|gb|EGF85962.1| peptide chain release factor 1 [Gemella sanguinis M325] Length = 362 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 118/356 (33%), Positives = 190/356 (53%), Gaps = 14/356 (3%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ--- 63 + LG + +R LN DP + + + +E++ ++ +S +E + Sbjct: 1 MEILGQ---LEVVEERYEKLNELLSDPDVVSDTKKLMEYSKEQRSIEKTVSVFREYKDIV 57 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVH 122 ++ D LLE+ +++ ++QE L+ E + L D + +EV Sbjct: 58 QQINDTKELLEIEDDKEMKEMMQEEIKELEPTLAPMEEELKILLLPKDPNDGKNVVVEVR 117 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGG E+Q +A LLRMYTR+AE + +K + LE + GIK A +I G + Y +K Sbjct: 118 GAAGGDEAQLFAGDLLRMYTRFAESQGWKVDVLERSETGIGGIKEAIFIISGEDVYSKMK 177 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HR+ R+ +S+ R HTS +++ V P ++ +E+D R+DT+ +SGAGGQ Sbjct: 178 FESGAHRVQRVPTTESSGRIHTSTATVVVLPEAEEVEIEI-NENDIRVDTFASSGAGGQS 236 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT SAVR+THIPTGVVV Q ERSQ KNK +A +LRA++Y+ ++EE A Sbjct: 237 VNTTMSAVRLTHIPTGVVVSMQDERSQIKNKEKAMKVLRARVYDKY--QQEEQAKFDAER 294 Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+++G G +IR+Y P V D R + +++G LD+ ++A ++ Sbjct: 295 KSKVGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEVLEALRIAEQ 349 >gi|326798862|ref|YP_004316681.1| peptide chain release factor 1 [Sphingobacterium sp. 21] gi|326549626|gb|ADZ78011.1| Peptide chain release factor 1 [Sphingobacterium sp. 21] Length = 357 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 98/342 (28%), Positives = 172/342 (50%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI---- 71 + R + + +P ++ L +E + L + ++ + + Sbjct: 5 LEAIKLRWEEVERELSNPDTVNDMKRFAKLNKEYKDLGKIVDEYYIYKNIISNIETNKDI 64 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L +E ++ L + + + E + + D+ +A E+ G GG E+ Sbjct: 65 LANEKDQELREMAKEDLDALLVQKEEKEEKVRLMMIPKDPEDAKNAIFEIRGGTGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYTR+ +++ ++ E +++ +G G K L + G + YG LK E GVHR+ Sbjct: 125 LFAGDLYRMYTRYFDQKGWRVEVMDVTEGTAGGYKEVILKVSGEDVYGQLKYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +S+ V P + +++EI+ +D + T R+ GAGGQ+VN ++ V+ Sbjct: 185 RVPDTETQGRVHTSAASVAVLP-EAEEVDVEINPADIEMQTSRSGGAGGQNVNKVETKVQ 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +TH P+G+VV CQ ERSQ N+ A MLR KLYELE+QK+ +I KT + G + Sbjct: 244 LTHKPSGIVVVCQVERSQLANRELAMEMLRTKLYELEVQKK--HGDIAAKRKTMVSTGDR 301 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P V + R + + ++DGD+ + + A Sbjct: 302 SAKIRTYNY-PQGRVTEHRIGLTMYNLPAIMDGDIQEIIDAL 342 >gi|115375817|ref|ZP_01463069.1| peptide chain release factor 1 [Stigmatella aurantiaca DW4/3-1] gi|310822927|ref|YP_003955285.1| peptide chain release factor 1 [Stigmatella aurantiaca DW4/3-1] gi|115367205|gb|EAU66188.1| peptide chain release factor 1 [Stigmatella aurantiaca DW4/3-1] gi|309395999|gb|ADO73458.1| Peptide chain release factor 1 [Stigmatella aurantiaca DW4/3-1] Length = 366 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 100/345 (28%), Positives = 177/345 (51%), Gaps = 11/345 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + +R L +P + + + + + +ER L+ + + + L D Sbjct: 1 MIDKLEEVERRFERLTADLSNPDVLADSAKLQKVSKERAALEKLVETFRTYRKVLGDLAE 60 Query: 72 LLELALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 + D Q+ + + + L D D LE+ AGAGG Sbjct: 61 VEAWLDGGDADEKAYAREALPGLKQQREEFEQELKILLLPKDPNDEKDVILEIRAGAGGD 120 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A +++MY R+A +R +K + +++ G G+K T+ + G + +K E GVH Sbjct: 121 EAGLFAEEVMQMYLRYATRRGWKADIVDMSPGSVGGVKDVTITLSGAAVFSNMKYESGVH 180 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ ++ R HTS ++ V P + ++++I+ +D + R++G+GGQ VNTTDS Sbjct: 181 RVQRVPATETQGRIHTSTITVSVMP-EAEDVDVQINPADIEMQVMRSTGSGGQSVNTTDS 239 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+ H P+G+VV+CQQE+SQ KN+AQA MLRAKLYE+E ++ + + ++G Sbjct: 240 AVRLIHKPSGIVVKCQQEKSQTKNRAQAMRMLRAKLYEIEQERIRSERD--SMRRGQVGT 297 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G +IR+Y P + D R ++ + ++ G +DD + A Sbjct: 298 GDRSEKIRTYNF-PQDRLTDHRISLTVHNLPGIMAGGIDDVITAC 341 >gi|319951972|ref|YP_004163239.1| bacterial peptide chain release factor 1 (brf-1) [Cellulophaga algicola DSM 14237] gi|319420632|gb|ADV47741.1| bacterial peptide chain release factor 1 (bRF-1) [Cellulophaga algicola DSM 14237] Length = 372 Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats. Identities = 100/346 (28%), Positives = 171/346 (49%), Gaps = 12/346 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCD 68 + D + QR ++ P + + L +E + L + + E + + + Sbjct: 15 MLDKLNIVKQRFDEVSDLIIQPDVISDQKRYVELNKEYKDLKSLVDKRDLYIEFTNNVEE 74 Query: 69 NLILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 ++ + + + + + + E + + DS + +EV AG GG Sbjct: 75 AQEIISDGSDAEMVEMAKMQLEEAKVGLPKLEEEIKVLLIPKDPEDSKNVVVEVRAGTGG 134 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYT++ E + +KT +++ +G G K + G N YG LK E GV Sbjct: 135 DEASIFAGDLFRMYTKYCESKGWKTNVIDLSEGTSGGYKEIQFEVTGDNVYGTLKFEAGV 194 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS +++ V P +D I D RID + +SG GGQ VNTT Sbjct: 195 HRVQRVPQTETQGRVHTSAATVMVLPEAEDFDVQ-IEPKDVRIDFFCSSGPGGQSVNTTY 253 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIP+G+V QCQ ++SQHKNK +A+ +LR++LY+ EL K++E +++ Sbjct: 254 SAVRLTHIPSGLVAQCQDQKSQHKNKEKAFKVLRSRLYDQELAKKQEE--DAAKRNSQVS 311 Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G + IR+Y V D R + ++++GD+ + Sbjct: 312 SGDRSAKIRTYNYS-QGRVTDHRIGLTLYDLQNIMNGDIQRIIDEL 356 >gi|261345593|ref|ZP_05973237.1| peptide chain release factor 2 [Providencia rustigianii DSM 4541] gi|282566073|gb|EFB71608.1| peptide chain release factor 2 [Providencia rustigianii DSM 4541] Length = 299 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 168/298 (56%), Positives = 217/298 (72%), Gaps = 1/298 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + I +++ + D LLELA+E DD ET L++++ ++E +F + SGE DS Sbjct: 1 MDTIDQLEQGIEDVEGLLELAIEADDEETFNETDAELEQLQGKLEQLEFRRMFSGEYDSA 60 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 + Y+++ AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E DG+ AG+KSAT+ I G Sbjct: 61 NCYIDLQAGSGGTEAQDWASMLMRMYLRWAESKGFKTEIIEESDGDVAGLKSATIKIIGD 120 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 AYGWL+ E GVHRLVR SP+DS RRHTSFSS ++YP VDD I+IEI+ +D RID YRA Sbjct: 121 YAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRA 180 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYELE+QK+ Sbjct: 181 SGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMRQLKAKLYELEIQKKNAD 240 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 E +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 241 KQAMEENKSDIGWGSQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 297 >gi|262041834|ref|ZP_06015019.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259040826|gb|EEW41912.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 360 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 113/337 (33%), Positives = 176/337 (52%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + + + D + Sbjct: 9 LEALYERHEEVQALLGDAATIADQDKFRALSREYAQLSDVARCYTDWRQVQEDIETAQMM 68 Query: 76 ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE + + + Q L D +A++EV AG GG E+ +A Sbjct: 69 LDDPEMREMAQEELRDAKEKGDQLEQQLQILLLPKDPDDERNAFVEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMYTR+AE R+++ E L ++GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYTRYAESRRWQVEILSANEGEHGGFKEVIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAEMPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ + ++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLDMLIE 342 >gi|152970781|ref|YP_001335890.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895295|ref|YP_002920030.1| peptide chain release factor 1 [Klebsiella pneumoniae NTUH-K2044] gi|330009867|ref|ZP_08306623.1| peptide chain release factor 1 [Klebsiella sp. MS 92-3] gi|166223565|sp|A6TAN9|RF1_KLEP7 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|150955630|gb|ABR77660.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238547612|dbj|BAH63963.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328534693|gb|EGF61258.1| peptide chain release factor 1 [Klebsiella sp. MS 92-3] Length = 360 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 113/337 (33%), Positives = 176/337 (52%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + + + D + Sbjct: 9 LEALYERHEEVQALLGDAATIADQDKFRALSREYAQLSDVARCYTDWRQVQEDIETAQMM 68 Query: 76 ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE + + + Q L D +A++EV AG GG E+ +A Sbjct: 69 LDDPEMREMAQEELRDAKEKGDQLEQQLQVLLLPKDPDDERNAFVEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMYTR+AE R+++ E L ++GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYTRYAESRRWQVEILSANEGEHGGFKEVIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAEMPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ E+ KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ + ++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLDMLIE 342 >gi|313886402|ref|ZP_07820124.1| peptide chain release factor 1 [Porphyromonas asaccharolytica PR426713P-I] gi|312924148|gb|EFR34935.1| peptide chain release factor 1 [Porphyromonas asaccharolytica PR426713P-I] Length = 368 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 99/355 (27%), Positives = 163/355 (45%), Gaps = 20/355 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLIL 72 + V R L T DP++ + L +E HL + K++ + + Sbjct: 8 VEALVARHEELETLITDPNVIADGRRFATLSKEYTHLGEILKAGGQYKQLLTQQEEAEST 67 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGTES 130 L+ A +++ + + ++ ++ + L + D +A LE+ AG GG E+ Sbjct: 68 LQDADSDEELKAMARELLAEAKEEIPKMEEEIKLLLLPNDPEDDKNAILELRAGTGGDEA 127 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY+R+ E + + +G G K L + G YG LK E GVHR+ Sbjct: 128 ALFAGDLFRMYSRYCETKGWNVTVSSYTEGGTGGYKEIVLNVTGTGVYGTLKYESGVHRV 187 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P D I+E + + DT+R+SGAGGQ+VN +S V Sbjct: 188 QRVPQTETQGRIHTSAATVAVLPEADKFEVN-INEGEIKWDTFRSSGAGGQNVNKVESGV 246 Query: 251 RITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 R+ + + ++C + R Q KNK +A + LR +Y+ E QK I I Sbjct: 247 RLHYPWRNPNTGVVEDITIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDEIASRR 304 Query: 303 KTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT + G + IR+Y P V D R + + VL GDL + A + + Sbjct: 305 KTMVSTGDRSAKIRTYNF-PQGRVTDHRIGLTVHNLPGVLGGDLQPIIDALIVAE 358 >gi|295100871|emb|CBK98416.1| bacterial peptide chain release factor 1 (bRF-1) [Faecalibacterium prausnitzii L2-6] Length = 361 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 103/348 (29%), Positives = 172/348 (49%), Gaps = 13/348 (3%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 + +R L+ + P + + + LM+E + + L Sbjct: 9 EAVCRRFEELSIRLNQPETAADPAQLRRLMQEYHEAQPVVDAYHALTTAQDHLAQAKALL 68 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFES------LLSGEADSNDAYLEVHAGAGGTES 130 ++ + + + + + E+ L D +E+ AGAGG E+ Sbjct: 69 EGDEPLDADFKAMVQQELSEKSQDVAELENNLKILLLPKDANDEKSVIMEIRAGAGGEEA 128 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A+ L+RMYT + + R ++ E L +++ E G K A + G AY LK E GVHR+ Sbjct: 129 ALFAHSLVRMYTMYVQSRGWEMELLNLNETELGGTKEAVFAVNGRGAYNRLKYESGVHRV 188 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + ++ + D RIDT+R+SGAGGQH+N T SA+ Sbjct: 189 QRVPETETQGRIHTSTATVAVMPQ-AEEVDFALDMKDLRIDTFRSSGAGGQHINKTSSAI 247 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+THIPTG VV+CQ ERSQ +NK +A +LR++L L +++E+ I ++G G Sbjct: 248 RVTHIPTGTVVECQNERSQFQNKDKALEILRSRL--LAQKQKEQQDAINADRAGQVGTGD 305 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P D R + + ++DGDLDD + A ++ Sbjct: 306 RSEKIRTYNF-PQDRCTDHRIGLTVHNLDKIMDGDLDDIIDALATREQ 352 >gi|117621299|ref|YP_857649.1| peptide chain release factor 1 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166223525|sp|A0KMZ8|RF1_AERHH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|117562706|gb|ABK39654.1| peptide chain release factor 1 [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 362 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 110/342 (32%), Positives = 184/342 (53%), Gaps = 9/342 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R + +P + + + L RE L++ + ++ + + ++ Sbjct: 9 LEGLIERHEEVQAMLGEPDVAADQDRYRALTREYAQLEDIVHAFQQFRQAEENLDATRQM 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + + + + Q L D N+ YLE+ AGAGG E+ Sbjct: 69 LEEDDADLREMAQEELPLAKATFEEQEQALQVMLLPRDPKDDNNCYLEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE++ ++ + +DGE G K ++G + YG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAERQGWRVSIVSCNDGEHGGYKEVIAKVEGEHVYGRLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P V ++ +IEI+ S+ +IDT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRVHTSACTVAVLPEVPEAEQIEINPSELKIDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ ERSQHKN+A+A ++L A+L E ++ + + +G G Sbjct: 249 THLPTGLVVECQDERSQHKNRAKAMSVLSARLQAAEDERHRAAEQ--STRRNLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P + + R N+ ++++GDLD + + Sbjct: 307 ERIRTYNY-PQGRLSEHRINLTLYRLGEIMEGDLDCVISPMI 347 >gi|15834912|ref|NP_296671.1| peptide chain release factor 1 [Chlamydia muridarum Nigg] gi|270285082|ref|ZP_06194476.1| peptide chain release factor 1 [Chlamydia muridarum Nigg] gi|270289105|ref|ZP_06195407.1| peptide chain release factor 1 [Chlamydia muridarum Weiss] gi|301336478|ref|ZP_07224680.1| peptide chain release factor 1 [Chlamydia muridarum MopnTet14] gi|13878666|sp|Q9PL16|RF1_CHLMU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|7190335|gb|AAF39160.1| peptide chain release factor 1 [Chlamydia muridarum Nigg] Length = 359 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 113/340 (33%), Positives = 174/340 (51%), Gaps = 11/340 (3%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI----QDRLCDNLILLELA 76 +RL + DP+++ N E L +E L + + I + D L L Sbjct: 10 RRLEEVEKLISDPNIFSNPKEYSSLSKEHARLSEIKNAHESILAAKKILHDDKLALSTEK 69 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 E + + + ++ + + + D +E+ AG GG E+ + Sbjct: 70 DPEMIAMLEEGIQGGEESLERLSKQLENLLIPPDPDDDLSVIMELRAGTGGDEAALFVGD 129 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 +RMY +A + ++ E L + + G K + + G + +L+ E G HR+ R+ Sbjct: 130 CVRMYHLYASIKGWQCEVLSASESDLGGYKEYIMGVSGTSVKRFLQYEAGTHRVQRVPET 189 Query: 197 DSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 ++ R HTS +I V P +D E+ I E D RIDT+R+SGAGGQHVN TDSAVRITHI Sbjct: 190 ETQGRVHTSAVTIAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSAVRITHI 249 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTGVVV CQ ERSQHKNKA+A +L+A++ + E+QKRE+ A+ S ++G G +I Sbjct: 250 PTGVVVSCQDERSQHKNKAKAMRVLKARIRDAEVQKREQEASAMRS--AQVGSGDRSERI 307 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 R+Y P V D R + + V+ G+LD A ++ Sbjct: 308 RTYNF-PQNRVTDHRIGLTLYNLDRVMQGELDMITTALVS 346 >gi|204927641|ref|ZP_03218842.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204322983|gb|EDZ08179.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 360 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 113/337 (33%), Positives = 176/337 (52%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + Q D + Sbjct: 9 LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTNWQQVQDDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE ++ + + Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESRRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A+++ E KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ + ++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIE 342 >gi|194736546|ref|YP_002114806.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|238689756|sp|B4TXU2|RF1_SALSV RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|194712048|gb|ACF91269.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|322616772|gb|EFY13680.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620418|gb|EFY17284.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625680|gb|EFY22499.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626130|gb|EFY22940.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633737|gb|EFY30477.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322638891|gb|EFY35584.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640874|gb|EFY37523.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644095|gb|EFY40640.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649166|gb|EFY45604.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655325|gb|EFY51633.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660917|gb|EFY57148.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662786|gb|EFY58993.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667970|gb|EFY64129.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674268|gb|EFY70362.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678549|gb|EFY74607.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683208|gb|EFY79224.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686902|gb|EFY82880.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323195208|gb|EFZ80388.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200201|gb|EFZ85287.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204529|gb|EFZ89533.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207354|gb|EFZ92302.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213949|gb|EFZ98718.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217339|gb|EGA02058.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219317|gb|EGA03806.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323228020|gb|EGA12165.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231361|gb|EGA15474.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235801|gb|EGA19880.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240370|gb|EGA24413.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245262|gb|EGA29262.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323252824|gb|EGA36660.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323254893|gb|EGA38687.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261018|gb|EGA44613.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266735|gb|EGA50221.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268942|gb|EGA52398.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 360 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 113/337 (33%), Positives = 177/337 (52%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE ++ + + Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESRRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A+++ E KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ + ++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIE 342 >gi|16760669|ref|NP_456286.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16765117|ref|NP_460732.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29141572|ref|NP_804914.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62180340|ref|YP_216757.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161613728|ref|YP_001587693.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|168241358|ref|ZP_02666290.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168259999|ref|ZP_02681972.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168462748|ref|ZP_02696679.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168820514|ref|ZP_02832514.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194443280|ref|YP_002041026.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194448370|ref|YP_002045819.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194471193|ref|ZP_03077177.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197250213|ref|YP_002146253.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|198242115|ref|YP_002215369.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200389390|ref|ZP_03216001.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|207856717|ref|YP_002243368.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213051786|ref|ZP_03344664.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213426495|ref|ZP_03359245.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213617488|ref|ZP_03372314.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213648795|ref|ZP_03378848.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|238913676|ref|ZP_04657513.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289827376|ref|ZP_06545996.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|61230201|sp|P0A287|RF1_SALTY RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|61230203|sp|P0A288|RF1_SALTI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|75482992|sp|Q57NN5|RF1_SALCH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189039989|sp|A9MW04|RF1_SALPB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238690045|sp|B5F4H6|RF1_SALA4 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238690378|sp|B5FU19|RF1_SALDC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238690453|sp|B5R3J9|RF1_SALEP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238690683|sp|B4TKA4|RF1_SALHS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238693511|sp|B4SUG2|RF1_SALNS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|25299687|pir||AB0720 peptide chain release factor 1 (RF-1) [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|154104|gb|AAA88611.1| release factor 1 [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16420306|gb|AAL20691.1| peptide chain release factor RF-1 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502965|emb|CAD02131.1| peptide chain release factor 1 (RF-1) [Salmonella enterica subsp. enterica serovar Typhi] gi|29137199|gb|AAO68763.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62127973|gb|AAX65676.1| peptide chain release factor RF-1 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161363092|gb|ABX66860.1| hypothetical protein SPAB_01453 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194401943|gb|ACF62165.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194406674|gb|ACF66893.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194457557|gb|EDX46396.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195633960|gb|EDX52312.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197213916|gb|ACH51313.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197936631|gb|ACH73964.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199601835|gb|EDZ00381.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205339285|gb|EDZ26049.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205342722|gb|EDZ29486.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205351018|gb|EDZ37649.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206708520|emb|CAR32841.1| Peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261246962|emb|CBG24779.1| RF-1 [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993724|gb|ACY88609.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158300|emb|CBW17799.1| peptide chain release factor 1 (RF-1) [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912765|dbj|BAJ36739.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085723|emb|CBY95501.1| Peptide chain release factor 1 RF-1 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321224404|gb|EFX49467.1| Peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322714814|gb|EFZ06385.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323130046|gb|ADX17476.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326623115|gb|EGE29460.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332988663|gb|AEF07646.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 360 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 113/337 (33%), Positives = 177/337 (52%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE ++ + + Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A+++ E KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ + ++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIE 342 >gi|302785810|ref|XP_002974676.1| hypothetical protein SELMODRAFT_174481 [Selaginella moellendorffii] gi|300157571|gb|EFJ24196.1| hypothetical protein SELMODRAFT_174481 [Selaginella moellendorffii] Length = 412 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 106/347 (30%), Positives = 180/347 (51%), Gaps = 12/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+A Q L K DP + + E + L + ++ ++ ++ ++ + L E+ Sbjct: 59 LDSAEQTYKELTVKLADPDVANDPSEFQKLAKAIADMEEVVTSYQKYKESQRELDDLQEM 118 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 D + + + +K + + L S DS + LEV AG GG E+ Sbjct: 119 IKSSGDKELAEMAVEESAILKENITNLEEYLKVLLLPSDPLDSRNIMLEVRAGTGGDEAG 178 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 WA L+RMY ++AE+ ++ + + E+ G K L I G Y LK E GVHR+ Sbjct: 179 IWAGDLVRMYQKYAEQNRWNWSPISQTEAEKGGFKEYVLEITGDRVYSKLKYESGVHRVQ 238 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ + P D +E+ I D + T R+ GAGGQ+VN ++AV Sbjct: 239 RVPATESQGRVHTSTATVAIMP-EVDEVEVVIDPKDIELTTARSGGAGGQNVNKVETAVD 297 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 + H PTG+ + C +ER+Q KNKA+A+ +LRAKLYE++L +++E I ++++G G Sbjct: 298 LFHKPTGIRIFCTEERTQLKNKARAFQLLRAKLYEMKLAEQQE--KISSQRRSQVGTGAR 355 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D RT I L G+++ ++A A+++ Sbjct: 356 SEKIRTYNYKD-NRVSDHRTKI-NFDLDSFLSGNIESAVQACAAMEQ 400 >gi|256419486|ref|YP_003120139.1| peptide chain release factor 1 [Chitinophaga pinensis DSM 2588] gi|256034394|gb|ACU57938.1| peptide chain release factor 1 [Chitinophaga pinensis DSM 2588] Length = 354 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 105/339 (30%), Positives = 173/339 (51%), Gaps = 10/339 (2%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LILLE 74 R ++ +P + + + L +E + L+ + L + +LE Sbjct: 7 AIKGRFEQVSLALTNPEIVSDNKQFSKLSKEYRQLEKIVKVYDAYMKTLDNIAFNKEVLE 66 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 EE +ET + + + D +A LE+ G GG E+ +A Sbjct: 67 SGDEEMRELAKEETEALQLLKDEQEADIRNLLIPKDPQDEKNAMLEIRGGTGGDEASLFA 126 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+ E + + T + G G K + + G + YG LK E GVHR+ R+ Sbjct: 127 GDLLRMYLRYCETKGWSTSIMNETPGAAGGYKEVVVEVTGDDVYGTLKFESGVHRVQRVP 186 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS +++ + P + +++EI ++D ++DT+R+SGAGGQHVN T+SAVR+TH Sbjct: 187 ATETQGRVHTSAATVAILP-EAEEVDVEIRDADIKMDTFRSSGAGGQHVNKTESAVRLTH 245 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IP+GVVV+CQ+ RSQH N+ A MLR+++YE ++K EE I K+ + G + Sbjct: 246 IPSGVVVECQEGRSQHSNRDIAMKMLRSRIYEAAVRKHEE--AIASQRKSLVSTGDRSAK 303 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P V D R + + ++GD+ + ++A Sbjct: 304 IRTYNY-PQGRVTDHRIGMTMYNLDAFMNGDIQEMVQAL 341 >gi|56413303|ref|YP_150378.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362228|ref|YP_002141865.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|81599266|sp|Q5PCQ9|RF1_SALPA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238690759|sp|B5BI75|RF1_SALPK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|56127560|gb|AAV77066.1| peptide chain release factor 1 (RF-1) [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093705|emb|CAR59177.1| peptide chain release factor 1 (RF-1) [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 360 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 112/337 (33%), Positives = 177/337 (52%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE ++ + + Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ +I+ +D RIDT+R+SGAGGQHVNTTDS++RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSSIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A+++ E KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ + ++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIE 342 >gi|315223860|ref|ZP_07865708.1| peptide chain release factor RF2 [Capnocytophaga ochracea F0287] gi|314946190|gb|EFS98191.1| peptide chain release factor RF2 [Capnocytophaga ochracea F0287] Length = 315 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 141/308 (45%), Positives = 213/308 (69%), Gaps = 2/308 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRE + + +E ++ D +LL+ E + + + +E +F Sbjct: 1 MRELRTKKKWVEDYEEAENLTSDIEVLLDFFKEGEATAEDVDHQYTQALHAIEAL--EFR 58 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++LS E D+ A L++ AGAGGTES DWA+MLLRMYT W +K+K + L +G+ AGI Sbjct: 59 NMLSDEGDTMSAVLQITAGAGGTESCDWASMLLRMYTMWCNNQKYKVKTLNFQEGDVAGI 118 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ T+ I+G A+G+LKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDD+IEI+I+ Sbjct: 119 KTVTIEIEGEYAFGYLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIDINP 178 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D +T R+SGAGGQ+VN ++AVR+ H PTG++++ + RSQ NK +A +L+++LY Sbjct: 179 ADITFETMRSSGAGGQNVNKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQLLKSQLY 238 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KR+ + E+ K +I WG QIR+YV+ PY++VKD+RTN E T V++G+LD+ Sbjct: 239 EIELKKRQAKRDEIEAGKMKIEWGSQIRNYVMHPYKLVKDVRTNYESTDVDSVMNGELDE 298 Query: 346 FMKATLAI 353 F+KA L + Sbjct: 299 FLKAYLML 306 >gi|77920283|ref|YP_358098.1| peptide chain release factor 1 [Pelobacter carbinolicus DSM 2380] gi|119361572|sp|Q3A129|RF1_PELCD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|77546366|gb|ABA89928.1| bacterial peptide chain release factor 1 (bRF-1) [Pelobacter carbinolicus DSM 2380] Length = 356 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 108/345 (31%), Positives = 173/345 (50%), Gaps = 11/345 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL- 70 +F+ + R + DP + L RE L + ++ +E + D Sbjct: 2 IFNKLEEVEDRFREVEGLLSDPQVVSQQKRFLELTREHAELSSVVAVYREYKRVSEDIEG 61 Query: 71 --ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 LL+ + E E + + + + L D + LE+ AG GG Sbjct: 62 NRELLQDSDPEMREMAKAELPELEAHREELAQQLKVLLLPKDPNDDKNVILEIRAGTGGD 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMY+R+AE + +K E + + D E G K +I G Y LK E G H Sbjct: 122 EAALFAGDLFRMYSRFAEGQGWKVETMSVSDSEAGGFKEIIAMISGNRVYSQLKYESGTH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ ++ R HTS ++ V P + ++++I +D RID YRASGAGGQHVN T+S Sbjct: 182 RVQRVPETEAQGRIHTSACTVAVLP-EAEDVDVDIDPTDLRIDVYRASGAGGQHVNKTES 240 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PTGVVV CQ E+SQHKNKA+A +L++++ + + ++ A + K+++G Sbjct: 241 AVRITHVPTGVVVSCQDEKSQHKNKAKAMKVLKSRILDQVMA--DQQAQMAADRKSQVGS 298 Query: 309 GRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G + IR+Y P D R + ++ G+L + ++ Sbjct: 299 GDRSQRIRTYNF-PQGRCTDHRIGLTLYRLEGIMQGNLSELVEPL 342 >gi|120405293|ref|YP_955122.1| peptide chain release factor 1 [Mycobacterium vanbaalenii PYR-1] gi|166223576|sp|A1TD66|RF1_MYCVP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119958111|gb|ABM15116.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium vanbaalenii PYR-1] Length = 357 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 121/346 (34%), Positives = 171/346 (49%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L + DP L + AK + R + +S +++ D EL Sbjct: 8 IEAILAEYGELEQRLADPELHADPAAAKKVGRRFAQISPIVSTYHKLEAARGDLEAAREL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 DD S E + ++ + D++D LEV +G GG ES +A Sbjct: 68 --AADDASFAAEVDELTTKVADLDDRLTDLLAPRDPHDADDIVLEVKSGEGGEESALFAA 125 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-----KGPNAYGWLKGEQGVHRL 190 L RMY R+AE+ + L + G K ATL I + LK E GVHR+ Sbjct: 126 DLARMYIRYAERHGWTVTMLGETTSDLGGYKDATLSIAGKGDSADGVWSRLKFEGGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS + + VYP D+ +++I ESD RID YR+SG GGQ VNTTDSAV Sbjct: 186 QRVPVTESQGRVHTSAAGVLVYPEPDEVEQVQIDESDLRIDVYRSSGKGGQGVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG+VV CQ ERSQ +NKA+A +L A+L L ++ A+ +S+ + Sbjct: 246 RITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQALAEEQASADASADRASQIRTVDRS 305 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N + + VLDGDLD A A K Sbjct: 306 ERIRTYNY-PENRIADHRINYKSHNLDQVLDGDLDPLFDALAAADK 350 >gi|325914250|ref|ZP_08176600.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas vesicatoria ATCC 35937] gi|325539505|gb|EGD11151.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas vesicatoria ATCC 35937] Length = 361 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 112/345 (32%), Positives = 175/345 (50%), Gaps = 8/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R L DP + N + + L RE L+ +++ D + Sbjct: 9 LEALAERREELQHLLSDPDVVNNNDKFRSLSRELSQLEPVAIALEDEARAKADLSAAEAM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E Q E++ + + D + +LEV AG GG E+ +A Sbjct: 69 RNDPEMRELAEEEIAAAQARLDELDAQLALLLVPRDPRDDGNLFLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+AE++ +K E GE G K + G AY LK E G HR+ R+ Sbjct: 129 GDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ + P DD EI I+ +D ++DT+R+SGAGGQHVN T+SA+RITH Sbjct: 189 ATESQGRIHTSAATVAIIPEADDIEEIVINPADLKVDTFRSSGAGGQHVNKTESAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311 +P+GVVV+CQ ERSQH N+ +A L+A+L E E K A ++ K ++G G + Sbjct: 249 VPSGVVVECQTERSQHANRDKAMKRLKAQLVEAERSK--AAAAEAQTRKLQVGSGDRSQR 306 Query: 312 IRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R + ++++GDLD + L + Sbjct: 307 IRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIARLLHEHQ 350 >gi|306820781|ref|ZP_07454406.1| peptide chain release factor RF2 [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551171|gb|EFM39137.1| peptide chain release factor RF2 [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 316 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 146/312 (46%), Positives = 210/312 (67%), Gaps = 2/312 (0%) Query: 40 IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV 99 A+ ++++ + L+ I + ++++ D L+L + A ++ +E S ++ Sbjct: 2 ENAQKILKKSKSLEKKIEEYEMVKNKFEDILVLFDFASQDSSFE--EELSKETDNLEKIT 59 Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159 + +L+G+ D+N+A L VH+G GG ++QDW MLLRMYTR+A FK +++ Sbjct: 60 DSLSISIMLNGQYDANNAILSVHSGTGGLDAQDWTQMLLRMYTRFASNMGFKISYIDLQQ 119 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 +++G+KSATL I G NAYG+LK E+GVHRLVRISP+DS+ +RHTSF+S+ V P +DDSI Sbjct: 120 DDQSGVKSATLKIDGENAYGYLKCEKGVHRLVRISPFDSSGKRHTSFASVDVLPELDDSI 179 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 ++EI+ D ++DTYR+SGAGGQHVN T+SA+RITHIPTGVVVQCQ ERSQ N+ A M Sbjct: 180 KVEINPKDLKVDTYRSSGAGGQHVNKTESAIRITHIPTGVVVQCQNERSQISNRETAMKM 239 Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 L AKL EL+ + ++ + ++I WG QIRSYV QPY MVKD RTN E + V+ Sbjct: 240 LTAKLIELKELEHKDKIEDIQGKYSQIAWGSQIRSYVFQPYTMVKDHRTNYEVGNIGSVM 299 Query: 340 DGDLDDFMKATL 351 DGD+ F+ A L Sbjct: 300 DGDIMPFINAYL 311 >gi|309812101|ref|ZP_07705859.1| peptide chain release factor 1 [Dermacoccus sp. Ellin185] gi|308433788|gb|EFP57662.1| peptide chain release factor 1 [Dermacoccus sp. Ellin185] Length = 362 Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats. Identities = 113/352 (32%), Positives = 169/352 (48%), Gaps = 13/352 (3%) Query: 13 LFDWDN-AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D V L + +P + + L + L ++ + D Sbjct: 1 MLDSAATIVAEYDDLEKQLAEPATHADPTLMRRLNKRYAALAPTVAAYHAWKRAQDDLGA 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ELA E+ + + E D D LEV AG GG ES Sbjct: 61 AEELADEDAAFAAELPALQTHLDASADKLRTLLL--PRDEDDERDVVLEVKAGEGGAESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGE 184 +A L+RMY R+AE+R +K E + D + G K A + + G + LK E Sbjct: 119 LFAGDLVRMYLRYAERRGWKAEIADATDADLGGYKDARITVRAKGLPEPGEAPWARLKYE 178 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE-ISESDCRIDTYRASGAGGQHV 243 GVHR+ R+ +S R HTS + + V P +D+ + +D +ID YR+SG GGQ V Sbjct: 179 GGVHRVQRVPVTESQGRIHTSAAGVLVMPDLDEDDDEIEFGPNDLKIDVYRSSGPGGQSV 238 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSAVRITH+PTGVVV CQ E+SQ +NK A +L+A+L ++E++++E A+ S+ Sbjct: 239 NTTDSAVRITHLPTGVVVSCQNEKSQLQNKESALRVLKARLRQMEIERKEAEASAARKSQ 298 Query: 304 TE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +IR+Y P + D RT + + VLDGDLD +++ L Sbjct: 299 VRTVDRSERIRTYNF-PENRIADHRTGYKSYNLDAVLDGDLDAVVQSALDAD 349 >gi|260891992|ref|YP_003238089.1| peptide chain release factor 1 [Ammonifex degensii KC4] gi|260864133|gb|ACX51239.1| peptide chain release factor 1 [Ammonifex degensii KC4] Length = 355 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 115/345 (33%), Positives = 179/345 (51%), Gaps = 7/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + L K DP + + + ++ L+ +S +E + L L Sbjct: 5 LAELETQFEDLTLKIADPEVMADQKRWREYVKRHAELEPIVSTYREYKRVLEGIEEAEML 64 Query: 76 ----ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EE +E +R + + + L D + LE+ AG GG E+ Sbjct: 65 LDQEQDEELRELAEEELETLKERREELEKELKILLLPKDPNDEKNVILEIRAGTGGEEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY R+AEKR +KTE L + G K +LI+G AY +LK E GVHR+ Sbjct: 125 LFAADLLRMYLRYAEKRGWKTELLSASPTDLGGFKEVVVLIEGRGAYSFLKYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +++ R HTS +++ V P + +++EI D R+DT+ +SG GGQ VNTT SAVR Sbjct: 185 RVPVTEASGRIHTSAATVAVLP-EAEEVDVEIDPKDIRVDTFCSSGHGGQSVNTTYSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310 ITH+PTG+VV CQ ERSQ KN+ +A +LRA+L +L+ +++E ++ + G Sbjct: 244 ITHLPTGIVVTCQDERSQLKNREKAMKVLRARLLDLKRREQEAAIAAERRAQVKSGDRSE 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 ++R+Y P V D R N+ ++L+GDLD+ + A A + Sbjct: 304 RVRTYNF-PQNRVTDHRINLTLYRLEEILEGDLDELITALAAADQ 347 >gi|262279542|ref|ZP_06057327.1| peptide chain release factor 1 [Acinetobacter calcoaceticus RUH2202] gi|262259893|gb|EEY78626.1| peptide chain release factor 1 [Acinetobacter calcoaceticus RUH2202] Length = 362 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 113/339 (33%), Positives = 168/339 (49%), Gaps = 7/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + L RE L + + D + Sbjct: 9 LDQLCDRHEELTALLADVEVISDNKRFRKLSREHSDLSEITEVWGKYRQAEEDIETAELM 68 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + +E + + + DSN AYLE+ AG GG E+ ++ Sbjct: 69 KSDPDFKDMAEEEIQANKALLGELESQLNILMIPKDPNDSNAAYLEIRAGTGGDEAAIFS 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+++AE + ++ E L ++GE G K + G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSKYAETQNWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLKFESGAHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P +D +EI+ +D RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 189 ATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG VV+CQ+ERSQHKNKA+A +L ++L + A E + +G G + Sbjct: 249 IPTGTVVECQEERSQHKNKAKAMALLVSRLENAKR--AAADAATSEMRRDLVGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P + D R N+ +++GDL + + + Sbjct: 307 IRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 344 >gi|149914649|ref|ZP_01903179.1| peptide chain release factor 1 [Roseobacter sp. AzwK-3b] gi|149811442|gb|EDM71277.1| peptide chain release factor 1 [Roseobacter sp. AzwK-3b] Length = 351 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 117/341 (34%), Positives = 178/341 (52%), Gaps = 14/341 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +QR +L + ++ L RE L + I+ + L D + Sbjct: 9 LNEILQRFEYLEAQMSAGG--GDIA---KLGREYAELRPVVEEIRAYRQVLDDLEAARAM 63 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E LQ K E Q L +AD+ A LE+ G GG E+ +A Sbjct: 64 LADPEMRDLAEEELTALQARKPKLEEQLQLALLPKDKADARPAILEIRPGTGGEEAALFA 123 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE R + E +E ++ E GIK + G + + LK E GVHR+ R+ Sbjct: 124 GDLLRMYHRYAEARGWSFEIIEQNETELGGIKEVIARVAGDHVFARLKFESGVHRVQRVP 183 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P + ++++I D RIDT R+SGAGGQHVNTTDSAVRITH Sbjct: 184 ETESGGRIHTSAATVAVLP-EAEDVDVQIDPGDLRIDTMRSSGAGGQHVNTTDSAVRITH 242 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV E+SQH+N+ A +L+ +LY+LE Q+ + + + ++G G + Sbjct: 243 LPTGIVVTSS-EKSQHRNREIAMQVLKTRLYDLERQRAADERSASRA--AQVGTGDRSER 299 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IR+Y P + D R N+ V+ GDLD+ + A A Sbjct: 300 IRTYNF-PQGRMTDHRINLTLYKLDQVMQGDLDEVIDALRA 339 >gi|168237830|ref|ZP_02662888.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197289243|gb|EDY28610.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 360 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 113/337 (33%), Positives = 176/337 (52%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE ++ + + Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESRRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A ++ E KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGACIHAAETAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ + ++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIE 342 >gi|299066996|emb|CBJ38191.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia solanacearum CMR15] Length = 300 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 160/298 (53%), Positives = 220/298 (73%), Gaps = 1/298 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + + ++ + L L ELA EE D ++ + ++ VE +F + SG D+ Sbjct: 2 VFALTKLDEDLTGGAELFELAREEGDDDTIEAVETDTAGMRAIVEDMEFRRMFSGPMDAA 61 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 + ++++ AGAGGTE+ DWA+MLLR Y ++ E++ FKTE LE +G+ AGIKSA+L ++G Sbjct: 62 NCFIDIQAGAGGTEACDWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASLKVEGE 121 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A+G+L+ E GVHRLVR SP+DS RHTSFSSI+VYP VDDSIEIE++ +D R+DTYRA Sbjct: 122 YAFGFLRTETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRA 181 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQH+N TDSAVRITHIPTG+VVQCQ +RSQH+N+A+A ML+++LYE EL+KR+ Sbjct: 182 SGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAE 241 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 A+ E+SKT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 242 ADKLEASKTDVGWGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDAFIEASLKQ 298 >gi|169826579|ref|YP_001696737.1| peptide chain release factor 1 [Lysinibacillus sphaericus C3-41] gi|238688208|sp|B1I069|RF1_LYSSC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|168991067|gb|ACA38607.1| Peptide chain release factor 1 (RF-1) [Lysinibacillus sphaericus C3-41] Length = 358 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 103/351 (29%), Positives = 174/351 (49%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD R L DP + + + + +E+ + + +E ++ + Sbjct: 1 MFDRLQAVEDRYERLTELLSDPDIVNDSKKLREYSKEQSDIQETVDTYREYKNVKEQLVD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 E+ E D + + + +K + E + + D+ + +E+ AGG Sbjct: 61 TREMLDSEKDPDMHEMVKEEFNLLKAQQEELEERLRILLIPKDPNDNKNVIMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE + +K + +E G K +I G AY K E G Sbjct: 121 DEANIFAGDLFRMYSRYAETQGWKIDIMEATPNPMGGYKEVIFMINGQGAYSKFKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ P + +++EI E D R+DT+ +SGAGGQ VNTT Sbjct: 181 HRVQRVPATESQGRIHTSTATVACLP-EVEEVDVEIHEKDIRVDTFASSGAGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTGVVV Q ERSQ KN+ +A +LRA++ ++ +Q E I + K+ +G Sbjct: 240 SAVRMTHLPTGVVVSMQDERSQIKNREKAMKILRARVADMYMQ--EAQKEIDATRKSAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++G LD+ + + ++ Sbjct: 298 SGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIVEGRLDEIIDTLILEEQ 347 >gi|291541665|emb|CBL14775.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus bromii L2-63] Length = 357 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 114/351 (32%), Positives = 200/351 (56%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL---CD 68 +F+ + +R S L+ + P + N E + +M+E + ++ + ++ ++ + D Sbjct: 1 MFEKIEIFDKRYSELSERLYQPSVAGNPEEYQKIMKEIKSIEEIVLTYRKYKEAVQTEKD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127 +L +LE +++ + Q D + + + L D + +E+ GAGG Sbjct: 61 SLEILEETSDKELKELAQIELDEAKDNIKNLAEDLKILLLPKDPNDERNVIVEIRGGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 ES ++ +L RMY+ +AEK+ FK E + ++ E G K + +I+G AY K E GV Sbjct: 121 EESALFSAVLFRMYSMYAEKKGFKIEIINANETEIGGYKEISFMIEGEGAYSRFKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +E+EI +D +IDT+R+SGAGGQH+N T Sbjct: 181 HRVQRVPETESQGRVHTSTTTVAVLP-EAEDVELEIDPNDLKIDTFRSSGAGGQHINKTS 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SA+RITH+PTG+VV+CQ ERSQ+KNK +A +L+++L L+ ++ ++ + I E+ K ++G Sbjct: 240 SAIRITHLPTGMVVECQDERSQYKNKDKALKVLKSRL--LKEKQDKQASEIAENRKMQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + ++L+G LD+ + A +A + Sbjct: 298 TGDRSERIRTYNY-PQGRVTDHRIGLTLYKLEEILNGSLDEVIDALVAADR 347 >gi|212637017|ref|YP_002313542.1| peptide chain release factor 2 [Shewanella piezotolerans WP3] gi|212558501|gb|ACJ30955.1| Peptide chain release factor 2 [Shewanella piezotolerans WP3] Length = 293 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 157/291 (53%), Positives = 206/291 (70%), Gaps = 1/291 (0%) Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L D LLELA+EEDD + S L ++ +E +F + SG D+ D YL++ Sbjct: 1 MDSGLEDIEGLLELAVEEDDEETFNDASAELDDLEKRLEELEFRRMFSGPHDAADCYLDI 60 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +G+GGTE+QDWANM+LRM+ RW E +K E +E+ DG+ AGIK AT+ G A+G L Sbjct: 61 QSGSGGTEAQDWANMVLRMFLRWGEAHDYKPELIEVTDGDVAGIKGATIKFTGEYAFGSL 120 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQ Sbjct: 121 RTETGVHRLVRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQ 180 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SA+RITH+PT VVQCQ +RSQHKN+ A L+AKLYELE+ ++ E Sbjct: 181 HVNKTESAIRITHVPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLRQNADKQAAED 240 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 241 AKSDIGWGSQIRSYVLDD-ARIKDLRTGVENRNTQSVLDGDLDKFIEASLK 290 >gi|299769517|ref|YP_003731543.1| peptide chain release factor 1 [Acinetobacter sp. DR1] gi|298699605|gb|ADI90170.1| peptide chain release factor 1 [Acinetobacter sp. DR1] Length = 362 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 113/339 (33%), Positives = 168/339 (49%), Gaps = 7/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + L RE L + + D + Sbjct: 9 LDQLCDRHEELTALLADVEVISDNKRFRKLSREHSDLSEITEVWGKYRQAEEDIETAEMM 68 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + +E + + + DSN AYLE+ AG GG E+ ++ Sbjct: 69 KSDPDFKDMAEEEIQANKDLLVELESQLNILMIPKDPNDSNAAYLEIRAGTGGDEAAIFS 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+++AE + ++ E L ++GE G K + G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSKYAETQNWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLKFESGAHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P +D +EI+ +D RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 189 ATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG VV+CQ+ERSQHKNKA+A +L ++L + A E + +G G + Sbjct: 249 IPTGTVVECQEERSQHKNKAKAMALLVSRLENAKR--AAADAATSEMRRDLVGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P + D R N+ +++GDL + + + Sbjct: 307 IRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 344 >gi|254785320|ref|YP_003072749.1| peptide chain release factor 2 [Teredinibacter turnerae T7901] gi|242667502|gb|ACS93539.1| peptide chain release factor 2 [Teredinibacter turnerae T7901] Length = 300 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 158/297 (53%), Positives = 214/297 (72%), Gaps = 1/297 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + I+ + + D L++LA+EE+D L++ + ++ ++ +F + SGE D+N Sbjct: 2 VETIENLDHGVTDCRDLIDLAVEENDEDSLEDVQSEIDSLEAQLAILEFRRMFSGEMDAN 61 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 +A+L++ +G+GGTE+QDWA M+LRMY RW E + FKT E GE AGIKSAT+ +G Sbjct: 62 NAFLDIQSGSGGTEAQDWAEMILRMYLRWGEDKGFKTTLEEASAGEVAGIKSATIRFEGE 121 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A+GWL+ E GVHRLVR SP+DS +RRHTSF+S++V P +DD IEI+I+ +D R+DTYRA Sbjct: 122 YAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVSPEIDDDIEIDINPADLRVDTYRA 181 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVN TDSAVRITH PTG+VVQCQ ERSQH N+ +A MLRA++YE E+ KR Sbjct: 182 SGAGGQHVNKTDSAVRITHEPTGIVVQCQSERSQHSNRDKAMKMLRARMYEHEILKRNAE 241 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E SK++IGWG QIRSYVL +KDLRT I+ ++ VLDG LDDF++A+L Sbjct: 242 KQALEDSKSDIGWGSQIRSYVLDDQ-RIKDLRTGIQTSNCQAVLDGKLDDFIEASLK 297 >gi|254447294|ref|ZP_05060761.1| peptide chain release factor 2 [gamma proteobacterium HTCC5015] gi|198263433|gb|EDY87711.1| peptide chain release factor 2 [gamma proteobacterium HTCC5015] Length = 300 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 160/297 (53%), Positives = 210/297 (70%), Gaps = 1/297 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + + I L D L+E+A EE D L D++ + VE +F + SGE D Sbjct: 2 VRGLDRITSGLGDAGDLIEMAKEEGDEETLAAVEDDIAELTDAVENLEFRRMFSGEMDEK 61 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 +AYL++ AG+GGTE+QDWANMLLRMY RW ++ FK E +E+ +G+ AGIKSAT+ I+G Sbjct: 62 NAYLDIQAGSGGTEAQDWANMLLRMYLRWCDQHGFKNEIVELSEGDVAGIKSATIHIQGD 121 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A+GWL+ E GVHRLVR SP+DS RRHTSF+S+++ P VDDS +I+I+ +D R+DTYR+ Sbjct: 122 YAFGWLRTETGVHRLVRKSPFDSGGRRHTSFASVFLSPEVDDSFDIDINPADLRVDTYRS 181 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVNTTDSAVRITH P+GVVV CQ +RSQH N+ A L+AKL+ELE+QKR + Sbjct: 182 SGAGGQHVNTTDSAVRITHAPSGVVVSCQNQRSQHANRDFAMKQLKAKLWELEMQKRNAV 241 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E +K +IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 242 KQEAEDNKADIGWGSQIRSYVLD-ASRIKDLRTGVETGNTQAVLDGSLDPFIEASLK 297 >gi|89897680|ref|YP_521167.1| peptide chain release factor 1 [Desulfitobacterium hafniense Y51] gi|89337128|dbj|BAE86723.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 360 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 109/345 (31%), Positives = 175/345 (50%), Gaps = 11/345 (3%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 +R L DP + N E + + + + + + +E + + L Sbjct: 12 EIERRYDELTQLLSDPEVIGNQSEWQKYAKAQAGMTDIVEAFREYSEVVKHLEETQGLLE 71 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E+ D + L+ + + + + L D + +E+ AGAGG E+ + Sbjct: 72 EKLDPEFKEMAELELEELTEKRDELEEKMRILLLPKDPNDDKNVIMEIRAGAGGEEAALF 131 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A L RMYT++AE++ ++TE L + G K LI+G AY LK E GVHR+ R+ Sbjct: 132 AGDLYRMYTKYAEQQGWRTELLSASYTDIGGFKEIIFLIEGQGAYSKLKFESGVHRVQRV 191 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +S R HTS +++ V P + +++ I+ +D RID + +SG GGQ VNTT SAVRIT Sbjct: 192 PTTESGGRIHTSTTTVAVLP-EAEEVDVAINPNDLRIDIFCSSGPGGQSVNTTQSAVRIT 250 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H+PTG VV CQ E+SQ KNK +A +LRA+L LE + E + + ++++G G Sbjct: 251 HVPTGTVVSCQDEKSQLKNKEKALRVLRARL--LERAQEEAMGELASERRSQVGTGDRSE 308 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G+LD+ + A + + Sbjct: 309 RIRTYNF-PQGRVTDHRIGLTLHRLDSILLGELDEVINALITTDQ 352 >gi|302036343|ref|YP_003796665.1| peptide chain release factor RF-1 [Candidatus Nitrospira defluvii] gi|300604407|emb|CBK40739.1| Peptide chain release factor RF-1 [Candidatus Nitrospira defluvii] Length = 386 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 119/345 (34%), Positives = 180/345 (52%), Gaps = 12/345 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN---AISFIKEIQDRLCDNLIL 72 W+ R L + DP + L +ER L+ E + +L D L Sbjct: 35 WEGMAARFQELTNQLMDPSVLNQPGMIHKLNKERTELEEPALQFIAYCEAKKQLEDVSAL 94 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTES 130 L+ A D L + + ++ + + L+ + + +LE+ AG GG E+ Sbjct: 95 LQDASTGADMKQLFAEESDHLQQQVLEIEHRAKDFLTPKDPRDEKNMFLEIRAGTGGDEA 154 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY ++AE+ + K E ++ + G + L++G AYG L+ E GVHR+ Sbjct: 155 ALFAGDLFRMYLKYAERNRLKLEVVDASETGIGGYREVIALLEGKGAYGRLRYESGVHRV 214 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +++ R HTS ++ V P D +E+ I D RIDT+ +SGAGGQ VNTT SAV Sbjct: 215 QRVPTTEASGRIHTSTVTVAVMP-EVDEVEVHIDPKDLRIDTFCSSGAGGQSVNTTYSAV 273 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTGVVV CQ ERSQ KN+ +A LRA++ E E +K+E I ++ K+++G G Sbjct: 274 RITHIPTGVVVSCQDERSQLKNRTKAMRNLRARIVEAEREKQEAE--IAQNRKSQVGTGD 331 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R + VL GDL++ ++A A Sbjct: 332 RSEKIRTYNF-PQNRVTDHRIGLTVHKLDQVLAGDLEEIVQALRA 375 >gi|17545749|ref|NP_519151.1| peptide chain release factor 2 protein [Ralstonia solanacearum GMI1000] gi|17428043|emb|CAD14732.1| probable peptide chain release factor 2 (rf-2) protein [Ralstonia solanacearum GMI1000] Length = 300 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 160/298 (53%), Positives = 220/298 (73%), Gaps = 1/298 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + + ++ + L L ELA EE D ++ + ++ VE +F + SG D+ Sbjct: 2 VFALTKLDEDLTGGAELFELAREEGDDDTIEAVEADTAGMRAIVEDMEFRRMFSGPMDAA 61 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 + ++++ AGAGGTE+ DWA+MLLR Y ++ E++ FKTE LE +G+ AGIKSA+L ++G Sbjct: 62 NCFIDIQAGAGGTEACDWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASLKVEGE 121 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A+G+L+ E GVHRLVR SP+DS RHTSFSSI+VYP VDDSIEIE++ +D R+DTYRA Sbjct: 122 YAFGFLRTETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRA 181 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQH+N TDSAVRITHIPTG+VVQCQ +RSQH+N+A+A ML+++LYE EL+KR+ Sbjct: 182 SGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAE 241 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 A+ E+SKT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 242 ADKLEASKTDVGWGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDAFIEASLKQ 298 >gi|218682869|ref|ZP_03530470.1| peptide chain release factor 2 [Rhizobium etli CIAT 894] Length = 267 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 198/250 (79%), Positives = 228/250 (91%) Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 E++LSGEA YLEVH+GAGGTESQDWANMLLRMYTRWAE+++FK E LE+HDGEEAG Sbjct: 5 EAMLSGEARQQRHYLEVHSGAGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDGEEAG 64 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 IKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSSIWVYPVVDDSI+IEI+ Sbjct: 65 IKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSIQIEIN 124 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 ESDCRIDTYR+SGAGGQHVNTTDSAVRITH+PTG+VVQCQQERSQHKN+A+AW+MLRA++ Sbjct: 125 ESDCRIDTYRSSGAGGQHVNTTDSAVRITHMPTGIVVQCQQERSQHKNRAKAWDMLRARM 184 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 YE EL+KRE+ AN +SKT+IGWG QIRSYVLQPYQ+VKDLRT + T+P DVLDGDL+ Sbjct: 185 YEAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVASTAPDDVLDGDLN 244 Query: 345 DFMKATLAIK 354 +FM+A LA + Sbjct: 245 EFMEAALAHR 254 >gi|91792280|ref|YP_561931.1| peptide chain release factor 1 [Shewanella denitrificans OS217] gi|119361603|sp|Q12QR8|RF1_SHEDO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|91714282|gb|ABE54208.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella denitrificans OS217] Length = 361 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 108/339 (31%), Positives = 181/339 (53%), Gaps = 9/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72 + ++R + D + + + L +E L++ + K Q D + Sbjct: 9 LEGLLERNEEVLAMLGDATVISDQERFRALSKEYSQLEDVVKSFKAFQQAQLDLASAKEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L+ E +E + I+ + Q L D +A+LE+ AGAGG E+ Sbjct: 69 LQEDDAEMREMAQEEMKAAKKVIEQLEDELQILLLPKDPNDDTNAFLEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+ E K++ E + +++ + G K + + G YG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRFCEANKWQVEVMNVNEADLGGFKEIIVKVSGEGVYGKLKYESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V V ++ I I+ +D ++DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRVHTSACTVVVLHEVPEAEAISINPADLKVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIP+G++V+CQ +RSQHKN+AQA ++L A++ +E +KR + ++ + G Sbjct: 249 THIPSGIIVECQDQRSQHKNRAQAMSVLAARIQAIEDEKRRSAEET--TRRSLVASGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +IR+Y P V D R N+ +++++GDL+ ++ Sbjct: 307 ERIRTYNY-PQGRVSDHRINLTLYRLNEIMEGDLNALLE 344 >gi|327395061|dbj|BAK12483.1| peptide chain release factor 2 PrfB [Pantoea ananatis AJ13355] Length = 293 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 162/290 (55%), Positives = 208/290 (71%), Gaps = 1/290 (0%) Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D LL+LA+E DD E L ++ ++ +F + SGE DS D Y+++ A Sbjct: 3 QGLEDVQGLLDLAVEADDEETFNEAVAELDALEGKLGELEFRRMFSGEYDSADCYIDLQA 62 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTE+QDWA+ML+RMY RWAE + FKTE +E +GE AGIKS T+ + G A+GWL+ Sbjct: 63 GSGGTEAQDWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAFGWLRT 122 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS RRHTSFSS ++YP VDD I+I+I+ +D RID YRASGAGGQHV Sbjct: 123 ETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIDINPADLRIDVYRASGAGGQHV 182 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRITH+PTG V QCQ +RSQHKNK QA ++AKLYELE+QK+ + E +K Sbjct: 183 NRTESAVRITHVPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQMLEDNK 242 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 ++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 243 SDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDRFIEASLKA 291 >gi|304311879|ref|YP_003811477.1| Peptide chain release factor 2 [gamma proteobacterium HdN1] gi|301797612|emb|CBL45833.1| Peptide chain release factor 2 [gamma proteobacterium HdN1] Length = 300 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 164/298 (55%), Positives = 218/298 (73%), Gaps = 1/298 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + I + RL LL++ +EE+D S+L + + I+ +V +F + SGE D+N Sbjct: 2 VGTIDSVSTRLRGARELLDMVVEENDESMLGDVQKEIDGIEADVAKMEFRRMFSGETDAN 61 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 YL++ AG+GGTE+QDWA+MLLRMY RW E FKTE +E+ GE AGIKSAT+ ++G Sbjct: 62 SCYLDIQAGSGGTEAQDWADMLLRMYLRWGEDHGFKTELVEVSAGEVAGIKSATIHLEGE 121 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A+GWL+ E GVHRLVR SP+DS +RRHTSFSS++V P +DD+I IEI+ +D ++DTYRA Sbjct: 122 YAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSSVFVSPEIDDNIHIEINPADLKVDTYRA 181 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVN T+SA+RITH+P+G+VVQCQ +RSQHKN+ QA LR+KLYE+E+QKR Sbjct: 182 SGAGGQHVNRTESAIRITHVPSGIVVQCQSDRSQHKNRDQAMKQLRSKLYEMEMQKRYVE 241 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 E SK +IGWG QIRSYVL VKDLRTN+E ++ VLDG++D F+KA+L Sbjct: 242 KMRQEDSKMDIGWGSQIRSYVLD-QSRVKDLRTNVETSNTEAVLDGEIDLFIKASLKA 298 >gi|16801748|ref|NP_472016.1| peptide chain release factor 1 [Listeria innocua Clip11262] gi|116873908|ref|YP_850689.1| peptide chain release factor 1 [Listeria welshimeri serovar 6b str. SLCC5334] gi|20139333|sp|Q927V0|RF1_LISIN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|123466615|sp|A0ALM8|RF1_LISW6 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|16415223|emb|CAC97913.1| prf1 [Listeria innocua Clip11262] gi|116742786|emb|CAK21910.1| peptide chain release factor 1 [Listeria welshimeri serovar 6b str. SLCC5334] gi|313617102|gb|EFR89654.1| peptide chain release factor 1 [Listeria innocua FSL S4-378] Length = 358 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 103/347 (29%), Positives = 172/347 (49%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R LN DP + + + L +E+ + + +E ++ EL Sbjct: 5 LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQIDETREL 64 Query: 76 ALEEDDCSILQETSDNLQRIKL----EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E+ D + + + ++ E + + D + LE+ AGG E+ Sbjct: 65 LGEKLDDEMREMAKEEFAELQKEKAELEERLKLLLVPKDPNDDKNVILEIRGAAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+++AE R +K E ++ + G K ++ G +A+ +K E G HR+ Sbjct: 125 LFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ + P + +EIE+ + D R DT+ ++GAGGQ VNTT SAVR Sbjct: 185 RVPETESGGRIHTSTATVAILP-EAEEVEIELHDKDIRTDTFASTGAGGQSVNTTMSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTG+VV Q ERSQ KNK +A +LRA++Y+ +RE + K+ +G G Sbjct: 244 LTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKF--EREAREEYDANRKSAVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +++G LD+ + A + + Sbjct: 302 SERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQ 347 >gi|325679581|ref|ZP_08159156.1| peptide chain release factor 1 [Ruminococcus albus 8] gi|324108611|gb|EGC02852.1| peptide chain release factor 1 [Ruminococcus albus 8] Length = 359 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 103/352 (29%), Positives = 171/352 (48%), Gaps = 12/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + + +N + P + + LM E + L + +KE + Sbjct: 1 MFDKLRALEDKFNEINERLMQPEVVNDSKLYTELMIEYRDLQPIVEKLKEYDKAKAEFDE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVE-----YKQFESLLSGEADSNDAYLEVHAGAG 126 +E+ + ++E + L D + +E+ GAG Sbjct: 61 AVEMMNDGGLDKDMKEMVQEQYDESKTAMAQLEDDLKILLLPKDPNDDRNVIIEIRGGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +AN L RMYT +A ++ ++ + + ++ E G K T + G AY LK E G Sbjct: 121 GEEAALFANSLYRMYTMYAAQKGWQIDVMSANETELGGYKEITFTVSGQGAYSRLKYESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S R HTS ++ V P ++ E D +++ +R+SGAGGQH+N T Sbjct: 181 VHRVQRVPETESQGRVHTSTVTVAVLPEAEEVELDLNEERDIKMEVFRSSGAGGQHINKT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+ HIPTG VV+CQ ERSQ +N+ +A MLRAKL L+ + R + I + ++++ Sbjct: 241 SSAVRLIHIPTGTVVECQNERSQFQNRDKALKMLRAKL--LDEKVRAQENEIASNRRSQV 298 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P + D R + +L+G+LD+ + A + Sbjct: 299 GTGDRSEKIRTYNF-PESRISDHRIKLTLYKLEQILNGNLDEVIDALATADQ 349 >gi|154506039|ref|ZP_02042777.1| hypothetical protein RUMGNA_03581 [Ruminococcus gnavus ATCC 29149] gi|153793538|gb|EDN75958.1| hypothetical protein RUMGNA_03581 [Ruminococcus gnavus ATCC 29149] Length = 314 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 157/310 (50%), Positives = 221/310 (71%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ + L +++ I+++ D +L+E++ EE D +QE + L R + E E + + Sbjct: 1 MQVLKSLQDSVKQIEQMYADYEDLGLLIEMSQEEQDEETVQEIEEELLRFEGEFEELRIQ 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LL+GE D + A + +HAGAGGTES DWANML RMYTRWAEK+ F E L+ +G+ AGI Sbjct: 61 TLLTGEYDRDHAIVTLHAGAGGTESCDWANMLYRMYTRWAEKKGFSVEVLDYLEGDVAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K T ++G NAYG+L+ E+GVHRLVRISP+++ +R TSF+S V P +++ I+IEI++ Sbjct: 121 KGVTFEVRGENAYGYLRSEKGVHRLVRISPFNAAGKRQTSFASCDVIPDIEEDIDIEIND 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D RIDTYR+SGAGGQH+N T SA+RITH PTG+VVQCQ ERSQH NK +A ML+AKLY Sbjct: 181 DDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVQCQNERSQHMNKDKAMQMLKAKLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ++ Q++ + + EIG+G QIRSYV+QPY +VKD RTN+E ++ + VLDG+LD Sbjct: 241 LMKQQEQADKVSGIRGEIKEIGFGSQIRSYVMQPYTLVKDHRTNMEISNVNGVLDGNLDP 300 Query: 346 FMKATLAIKK 355 F+ A L+ K Sbjct: 301 FINAYLSAPK 310 >gi|206901574|ref|YP_002251123.1| peptide chain release factor 2 [Dictyoglomus thermophilum H-6-12] gi|206740677|gb|ACI19735.1| peptide chain release factor 2 [Dictyoglomus thermophilum H-6-12] Length = 330 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 149/316 (47%), Positives = 205/316 (64%), Gaps = 3/316 (0%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W + + K ++ + L I ++++ + + +L E D+ E Sbjct: 8 WDDAEKVKPILTKYNKLQKEIENWEKLKADIKELSEWKDLLEEGDEYKEEFEKKLKEV-- 65 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + ++ + E +L D +A L +HAG GGT++QDW +LLRMY RWAE++ ++ + L Sbjct: 66 ENSLKEFEIEMILQDPHDEANAILSLHAGTGGTDAQDWTEILLRMYIRWAERKGYQVKIL 125 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 +I GEEAGIKSATLLI+G AYG+LKGE+GVHRLVRISP+D+N RRHTSF+ + V P + Sbjct: 126 DISPGEEAGIKSATLLIEGDKAYGYLKGEKGVHRLVRISPFDANHRRHTSFALVEVIPEL 185 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 +S IEI D +I+T+RA GAGGQHVN +SAVRITHIPTG+VVQCQ ERSQH NK Sbjct: 186 PES-TIEIRPEDLKIETFRAGGAGGQHVNKVESAVRITHIPTGIVVQCQNERSQHANKEM 244 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A +L+A+L ELE +KR E + EI WG QIRSYV PY +VKD RT +E + Sbjct: 245 ALRVLKARLEELEEKKRREKIASLKGEVQEISWGNQIRSYVFHPYTLVKDHRTGLEIGNV 304 Query: 336 SDVLDGDLDDFMKATL 351 V+DG++D F++A L Sbjct: 305 QAVIDGEIDPFIEAYL 320 >gi|258513428|ref|YP_003189650.1| peptide chain release factor 1 [Desulfotomaculum acetoxidans DSM 771] gi|257777133|gb|ACV61027.1| peptide chain release factor 1 [Desulfotomaculum acetoxidans DSM 771] Length = 355 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 116/351 (33%), Positives = 190/351 (54%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68 +F+ +R L DP + + + ++ + + ++ +E + + D Sbjct: 1 MFERLQKIEERYEELGDLMGDPEVMADHSRWQQYVKAHADMQDIVNVYREYRQLDQEVSD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGG 127 LL+ L+ED +++ + L K E+ K L D + LEV AG GG Sbjct: 61 ARELLKDKLDEDFREMVELELEELSEKKEELVQKLKLLLLPKDPNDDKNVILEVRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR+AEK+ ++TE L+ + + G K +I+G AY LK E GV Sbjct: 121 EEAALFAGDLFRMYTRYAEKQGWRTEVLDANYTDIGGFKEVVCMIEGKGAYSRLKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +EI+I+ +D RID + ++G GGQ VNTT Sbjct: 181 HRVQRVPSTESGGRIHTSAATVAVLP-EAEEVEIDINPNDLRIDVFCSTGPGGQSVNTTQ 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+P+G+VV CQ E+SQHKNK +A +LRA+L +L + E+ + + + K+ +G Sbjct: 240 SAVRITHLPSGLVVSCQDEKSQHKNKDKAMRVLRARLKDLA--ESEQRSELASTRKSMVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P + D R + VL G++D+ ++A + + Sbjct: 298 SGDRSERIRTYNF-PQNRITDHRIGLTTHRMPAVLMGEMDEIIEALITTDQ 347 >gi|283471335|emb|CAQ50546.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus ST398] Length = 358 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 112/347 (32%), Positives = 182/347 (52%), Gaps = 12/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +R LN DP + + + + +E+ L + + + + + + E+ Sbjct: 5 LDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKAKKEELADIEEM 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E DD ++ + IK E+ + + D D +E+ A AGG E+ Sbjct: 65 LSETDDKEEVEMLKEESSGIKAELPNLEEELKILLIPKDPNDDKDVIVEIRAAAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L+RMY+++AE + FKTE +E + + G K + + G AY LK E G HR+ Sbjct: 125 IFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENGAHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + +EIEI D +IDTYR+SGAGGQHVNTTDSAVR Sbjct: 185 RVPETESGGRIHTSTATVAVLP-EVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTDSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTGV+ E+SQ +N+ +A +L+A+LY++++Q EE K+ +G G Sbjct: 244 ITHLPTGVIATSS-EKSQIQNREKAMKVLKARLYDMKVQ--EEQQKYASQRKSAVGTGDR 300 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +++G L++ + A ++ Sbjct: 301 SERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGHLEEIIDALTLSEQ 346 >gi|227890652|ref|ZP_04008457.1| peptide chain release factor 1 [Lactobacillus salivarius ATCC 11741] gi|227867590|gb|EEJ75011.1| peptide chain release factor 1 [Lactobacillus salivarius ATCC 11741] Length = 360 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 106/352 (30%), Positives = 182/352 (51%), Gaps = 12/352 (3%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLC 67 LFD R L DP + + L +E L + + + ++ Sbjct: 3 KLFDRLQMLEDRYEELGELLSDPDVISDTKRFTKLSKEMADLRETVEKYNKYKEVTQQIS 62 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D+ +L L+++ S+++E N + K E + L D + +E+ AG Sbjct: 63 DDEEMLSDGLDDEMASLVKEELSNAKDEKVKLEEEIKILLLPKDPNDDKNIIMEIRGAAG 122 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L MY+++AE++ + E ++ + E G K L+I G + + LK E G Sbjct: 123 GDEASLFAADLFSMYSKYAERQGWSIEVIDKNVTEVGGFKEIALIINGNSVWSKLKYESG 182 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ RI +S R HTS +++ V P ++ +EIE+ D R+D YR+SGAGGQH+N T Sbjct: 183 AHRVQRIPVTESAGRVHTSTATVVVMP-EEEDVEIELDPKDIRVDVYRSSGAGGQHINKT 241 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+TH+PTG+VV Q +RSQ +N+ +A +L+A++Y+ Q+ E + + K+ + Sbjct: 242 SSAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDYYAQQ--EQSEYDANRKSAV 299 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R + +++G+L+D + A + ++ Sbjct: 300 GTGDRSERIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELEDVIDALILFEQ 350 >gi|161503112|ref|YP_001570224.1| peptide chain release factor 1 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189039988|sp|A9MPA1|RF1_SALAR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|160864459|gb|ABX21082.1| hypothetical protein SARI_01177 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 360 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 113/337 (33%), Positives = 177/337 (52%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE ++ + + Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGEGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A+++ E KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ + ++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIE 342 >gi|189345639|ref|YP_001942168.1| peptide chain release factor 1 [Chlorobium limicola DSM 245] gi|238692166|sp|B3EE55|RF1_CHLL2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189339786|gb|ACD89189.1| peptide chain release factor 1 [Chlorobium limicola DSM 245] Length = 357 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 103/347 (29%), Positives = 175/347 (50%), Gaps = 13/347 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + ++ L + DP + + L +E L + Sbjct: 1 MFDKLQSIKEKHLDLEQQLADPSAASDQNRFRKLNKEYSDLKEIVHAFDRYSLARKQLEE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 EL E D + + ++ ++ ++ + L EADS + +E+ AG GG Sbjct: 61 SRELLGSEKDPQMRELVQMEIEDLQEKLPELEQQLKVLLLPKDEADSRNVIMEIRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNAYGWLKGEQG 186 E+ +A LLRMY R+AE++ +K L+ + G + TL + G + + +K E G Sbjct: 121 DEAALFAADLLRMYQRYAERQGWKCVLLDYTESSVPGGFREVTLEVSGHDVFATMKYESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ ++ R HTS +S+ V P + +++EI D R DTYR+ G GGQ+VN Sbjct: 181 VHRVQRVPDTETQGRIHTSAASVAVLP-EAEEVDVEIRRDDLRFDTYRSGGKGGQNVNKV 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 ++AVRITH+PTG+V CQ+ERSQ +NK +A MLR KLY+++L ++++ ++ + Sbjct: 240 ETAVRITHLPTGIVAACQEERSQLQNKERAMTMLRTKLYDIQLAEQQQQRADL--RRSMV 297 Query: 307 GWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G + IR+Y P V D R + ++ G++ D ++A Sbjct: 298 STGDRSAKIRTYNY-PQSRVTDHRIGFTSHALPQIMQGEIGDVIEAL 343 >gi|254238595|ref|ZP_04931918.1| peptide chain release factor 1 [Pseudomonas aeruginosa C3719] gi|126170526|gb|EAZ56037.1| peptide chain release factor 1 [Pseudomonas aeruginosa C3719] Length = 360 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 115/342 (33%), Positives = 173/342 (50%), Gaps = 9/342 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + RE ++ I ++ + D L Sbjct: 9 LDVLSDRYEELTALLGDAEVISDQTRFRAYSREYAEVEPVILAFRDYRKVQADLEGAQAL 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + R+ + Q L DS + +LE+ AG G E+ Sbjct: 69 LKDSDPELRDLAEEEVAEARGRLAALGDSLQRMLLPKDPNDSRNVFLEIRAGTCGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AE++ ++ E L ++GE G K ++G N Y LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAERQGWRVETLSENEGEHGGYKEVIARVEGDNVYAKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ IEI+ +D R+DTYR+SGAGGQHVN TDSAVRI Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQHVNKTDSAVRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIP+G+VV+CQ+ERSQHKN+A+A L AKL + + I + K +G G Sbjct: 249 THIPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQ--AAAQQAIASTRKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R N+ S +V++G ++ ++ L Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYSLGEVMEGAVEQVIEPLL 347 >gi|27363990|ref|NP_759518.1| peptide chain release factor 2 [Vibrio vulnificus CMCP6] gi|37678852|ref|NP_933461.1| protein chain release factor B [Vibrio vulnificus YJ016] gi|320157369|ref|YP_004189748.1| peptide chain release factor 2 [Vibrio vulnificus MO6-24/O] gi|27360107|gb|AAO09045.1| peptide chain release factor 2 [Vibrio vulnificus CMCP6] gi|37197593|dbj|BAC93432.1| protein chain release factor B [Vibrio vulnificus YJ016] gi|319932681|gb|ADV87545.1| peptide chain release factor 2 [Vibrio vulnificus MO6-24/O] Length = 289 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 160/287 (55%), Positives = 210/287 (73%), Gaps = 1/287 (0%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 + D LLELA+E +D E L+ ++ ++ +F + SG DS+D Y+++ AG+ Sbjct: 1 MDDVEGLLELAIEAEDQETFDEIGPELEALEEKLAGLEFRRMFSGAHDSSDCYIDLQAGS 60 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDW +M+LRMY RWAE + FKTE +E+ +G+ AG+KS T+ I G AYGWL+ E Sbjct: 61 GGTEAQDWTSMMLRMYLRWAEAKGFKTEVIEVSEGDVAGLKSVTVRIIGDYAYGWLRTET 120 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVR SP+DS RRHTSF+S +VYP +D++I+I+I+ +D RID YRASGAGGQHVNT Sbjct: 121 GVHRLVRKSPFDSGGRRHTSFASAFVYPEIDENIDIDINPADLRIDVYRASGAGGQHVNT 180 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T+SAVRITH+PT VVQCQ +RSQHKNK QA LRAKL+ELELQK+ E +K++ Sbjct: 181 TESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSD 240 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 241 IGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKFIEASLK 286 >gi|206895563|ref|YP_002247293.1| peptide chain release factor 2 [Coprothermobacter proteolyticus DSM 5265] gi|206738180|gb|ACI17258.1| peptide chain release factor 2 [Coprothermobacter proteolyticus DSM 5265] Length = 370 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 134/336 (39%), Positives = 206/336 (61%), Gaps = 1/336 (0%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ LS + E P +W + +A + R+ Q L+ I +++I++ L D LEL Sbjct: 26 LDDKKAELSDVRKVYEKPDIWSDPDKAVAVARKVQRLEEEIERVEQIENLLKDLDAALEL 85 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 E D + + L+ ++ +E + +L + D+NDA L +HAGAGG ++ DW Sbjct: 86 LQEGYDEELFEHALATLKELQQRIELFRLVTLFTEPYDTNDAILMLHAGAGGVDAMDWTQ 145 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 ML+RMY RWAE+ F+TE ++I GEEAG+KS T+ ++G AYG+L+ E+GVHRLVR+SP Sbjct: 146 MLMRMYLRWAERMGFETEIVDISRGEEAGVKSCTVFVRGSYAYGYLRAEKGVHRLVRLSP 205 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +D++ RRHTSF+ + + +E+EI+ D ++T+R+ GAGGQH N T+S VR+ H Sbjct: 206 FDADHRRHTSFA-LVDVVPDVEDVEVEINPDDIEVETFRSGGAGGQHQNKTESGVRLIHK 264 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315 PTG+ V +ERSQ +N+ +A +LRA++++ ++R++ WG QIRSY Sbjct: 265 PTGITVTVTEERSQLQNRERAMRILRARVHQYHEEERKKSLEEIRGDVKSASWGNQIRSY 324 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 V PY MVKD RT + +V+DGD+ DFM L Sbjct: 325 VFHPYNMVKDHRTGYSRGDIDNVMDGDITDFMVKFL 360 >gi|319936941|ref|ZP_08011351.1| peptide chain release factor 1 [Coprobacillus sp. 29_1] gi|319807877|gb|EFW04456.1| peptide chain release factor 1 [Coprobacillus sp. 29_1] Length = 358 Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats. Identities = 112/346 (32%), Positives = 177/346 (51%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R LN DP + ++ + +E+ L+ A +E + L EL Sbjct: 8 LETIARRYEELNEILMDPSIASDIHKMTEASKEQASLETAYQLYQEYKKVLSGIEEAKEL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYLEVHAGAGGTESQD 132 E D + + + + ++ E + D+ + +EV AGG E Sbjct: 68 MKENDPEIKEMAELELSELEEKKPHLEEKLHLELIPKDPNDNKNVIVEVRGAAGGDEGNI 127 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY ++AE + +K E +E + E G + ++KG Y LK E G HR+ R Sbjct: 128 FAGDLYRMYVKYAESQGWKVEVMETQESEAGGFSLVSFMVKGEGVYSKLKFESGSHRVQR 187 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ V P + +++EI+ D RIDTYRASGAGGQH+N TDSAVRI Sbjct: 188 VPKTETQGRVHTSTATVLVMP-EAEEVDVEINPGDLRIDTYRASGAGGQHINKTDSAVRI 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+V Q RSQH NK +A LRA++Y E+ +RE+ +G +++IG G Sbjct: 247 THLPTGIVASSQDGRSQHDNKDKAMRALRARVY--EMVQREQEEALGSERRSKIGSGDRS 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +++G LDD + A + + Sbjct: 305 EKIRTYNY-PQNRVTDHRIGLTIQQLDRIMEGKLDDVIDALINEDQ 349 >gi|315283708|ref|ZP_07871812.1| peptide chain release factor 1 [Listeria marthii FSL S4-120] gi|313612648|gb|EFR86686.1| peptide chain release factor 1 [Listeria marthii FSL S4-120] Length = 358 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 106/347 (30%), Positives = 178/347 (51%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72 R LN DP + + + L +E+ + + +E ++ ++ + L Sbjct: 5 LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVEAYREYKNVNEQINETKEL 64 Query: 73 LELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L L+++ + +E LQ+ K E + + D + LE+ AGG E+ Sbjct: 65 LGEKLDDEMREMAKEEFAELQKEKTELEERLKLLLVPKDPNDDKNVILEIRGAAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+++AE R +K E ++ + G K ++ G +A+ +K E G HR+ Sbjct: 125 LFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ + P + +EIE+ + D R DT+ ++GAGGQ VNTT SAVR Sbjct: 185 RVPETESGGRIHTSTATVAILP-EAEEVEIELHDKDIRTDTFASTGAGGQSVNTTMSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTG+VV Q ERSQ KNK +A +LRA++Y+ +RE + K+ +G G Sbjct: 244 LTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKF--EREAREEYDANRKSAVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +++G LD+ + A + + Sbjct: 302 SERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQ 347 >gi|126653461|ref|ZP_01725557.1| peptide chain release factor 1 [Bacillus sp. B14905] gi|126589817|gb|EAZ83950.1| peptide chain release factor 1 [Bacillus sp. B14905] Length = 358 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 103/351 (29%), Positives = 174/351 (49%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD R L DP + + + + +E+ + + +E ++ + Sbjct: 1 MFDRLQAVEDRYERLTELLSDPDIVNDSKKLREYSKEQSDIQETVDSYREYKNVKEQLVD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 E+ E D + + + +K + E + + D+ + +E+ AGG Sbjct: 61 TREMLDSEKDPDMHEMVKEEFNLLKAQQEELEERLRILLIPKDPNDNKNVIMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE + +K + +E G K +I G AY K E G Sbjct: 121 DEANIFAGDLFRMYSRYAETQGWKIDIMEATPNPMGGYKEVIFMINGQGAYSKFKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ P + +++EI E D R+DT+ +SGAGGQ VNTT Sbjct: 181 HRVQRVPATESQGRIHTSTATVACLP-EVEEVDVEIHEKDIRVDTFASSGAGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTGVVV Q ERSQ KN+ +A +LRA++ ++ +Q E I + K+ +G Sbjct: 240 SAVRMTHLPTGVVVSMQDERSQIKNREKAMKILRARVADMYMQ--EAQKEIDATRKSAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++G LD+ + + ++ Sbjct: 298 SGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIVEGRLDEIIDTLILEEQ 347 >gi|170017816|ref|YP_001728735.1| peptide chain release factor 1 [Leuconostoc citreum KM20] gi|238692786|sp|B1MVN7|RF1_LEUCK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|169804673|gb|ACA83291.1| Peptide chain release factor 1 [Leuconostoc citreum KM20] Length = 357 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 96/344 (27%), Positives = 165/344 (47%), Gaps = 8/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 V R LN + DP + + + L +E + + Q L D +L Sbjct: 8 LQTVVDRYDELNEQLADPEIAGDGQKYMALSKEAGEMRETVETYLHYQQVLQDIADAEDL 67 Query: 76 ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + ++ + + + L D + +E+ AGG ES +A Sbjct: 68 LDDAEMAPLAKEDLNTLKPEKEALESQLKILMLPKDPNDDKNIIMEIRGAAGGDESSLFA 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LL MY R+AEK+++ ++ E G K ++I G N Y LK E G HR+ R+ Sbjct: 128 ADLLDMYRRYAEKQRWTLSIIDETLTEVGGYKEVAVMITGDNVYSKLKFESGAHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS +++ V P + I+ E++ESD + +R+ GAGGQ+VN +AVR+ H Sbjct: 188 ATETQGRVHTSTATVGVMPEFQE-IDFELAESDLEEEFFRSGGAGGQNVNKVSTAVRLVH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 PTG++V+ Q+ER+Q KN+ +A +L +++Y+ Q+ E E K+ +G G + Sbjct: 247 KPTGIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNEAE--YAEKRKSAVGTGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R + V++G+L + + A + + Sbjct: 305 IRTYNY-PQNRVTDHRIGLTLNKLDRVMNGELGEVIDALVIADQ 347 >gi|290969299|ref|ZP_06560824.1| peptide chain release factor 1 [Megasphaera genomosp. type_1 str. 28L] gi|290780805|gb|EFD93408.1| peptide chain release factor 1 [Megasphaera genomosp. type_1 str. 28L] Length = 360 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 110/349 (31%), Positives = 186/349 (53%), Gaps = 13/349 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC----DNLI 71 + + L + DP + E + L +E L I ++ Q+ D + Sbjct: 6 VQAVENKYNDLEQRISDPAVIARQKEWQKLTKEHASLAPIIEAYRKYQEVCKTIRGDREL 65 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTES 130 L + + + + ++ +E L + + +E K L D + +E+ GAGG E+ Sbjct: 66 LDDPSTDTELTAMAKEEIAELTKEQAALEEKLHILMLPKDPHDDKNVIMEIRGGAGGDEA 125 Query: 131 QDWANMLLRMYTRWAEKR-KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +A L RMY ++ EK+ +K E + ++ E G K ++G YG LK E GVHR Sbjct: 126 ALFAGDLFRMYMKYIEKQPGWKAELISANEPELGGYKEVVFSVEGAGVYGKLKYESGVHR 185 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ ++ R HTS +++ V P D +EI++ D R+D +RASGAGGQH+N T SA Sbjct: 186 VQRVPVTEAGGRIHTSTATVAVLP-EADDVEIDLDMKDVRVDYFRASGAGGQHINKTSSA 244 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+TH+P+G+VV+CQ ERSQ +N+ +A +L+A+L L+ ++ + E+ ++++G G Sbjct: 245 VRMTHMPSGIVVECQDERSQLENRTKALRVLKARL--LDQAQQAAAQEVTEARRSQVGTG 302 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ VL+GDLD+F++A ++ Sbjct: 303 DRSERIRTYNY-PQGRVTDHRINVTLYKLDAVLNGDLDEFIQALAEARR 350 >gi|257066246|ref|YP_003152502.1| peptide chain release factor 1 [Anaerococcus prevotii DSM 20548] gi|256798126|gb|ACV28781.1| peptide chain release factor 1 [Anaerococcus prevotii DSM 20548] Length = 358 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 120/351 (34%), Positives = 189/351 (53%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ ++ + L K DP + ++ + + RE L + EI+D Sbjct: 1 MFENIEHIKENYLDLEKKMIDPDVLADISKLTKITREYNSLKPIVEKYDEIKDSESTIAE 60 Query: 72 LLELALEEDDCSILQETSDNLQRI----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 EL E DD +++ D ++ + E + + DS D +E+ GAGG Sbjct: 61 NKELIGEADDQDMVEMLKDEIKENEKLLEKYKEEMKILLIPKDPNDSRDVIVEIRPGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY +A+K +KTE +E+ GIK AT +I+G AY K E GV Sbjct: 121 DEAGLFAGDLYRMYHMYADKEGYKTEDVEVSSQGVGGIKEATFMIRGEGAYSRFKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P D +++E+ +D R D +R+SG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVDEVDVELDPNDIRTDVFRSSGNGGQSVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+VV Q E+SQ KNK +A +L A++YELE +KR + I ++ K+++G Sbjct: 240 SAVRLTHIPTGIVVSMQDEKSQIKNKEKAMKILLARIYELEEEKRNKE--IADNRKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P + D R N D L+G++ + + + +A + Sbjct: 298 TGDRSERIRTYNF-PQGRITDHRINKTIYQLDDFLNGNIGEMIDSLIAEDQ 347 >gi|327441448|dbj|BAK17813.1| protein chain release factor A [Solibacillus silvestris StLB046] Length = 358 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 109/351 (31%), Positives = 170/351 (48%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD R LN DP + + + + +E+ + + + + Sbjct: 1 MFDRLQAVEDRYERLNELLSDPDIVSDSNKLREYSKEQSDIQEMVDVYRVYKSVKEQLAD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 EL E D +L+ + + +V + + DS + +E+ AGG Sbjct: 61 TRELMEIEKDAEMLEMMKEEFNDLNKQVPELEERLRILLIPKDPNDSKNVIMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR+AE + +K + +E G K L+I G AY K E G Sbjct: 121 DEANIFAGDLFRMYTRYAETQGWKVDVMEATPNPAGGYKEVILMINGQGAYSKFKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ P ++EI E D R+DT+ +SGAGGQ VNTT Sbjct: 181 HRVQRVPATESQGRIHTSTATVACLP-EVHVEDVEIHEKDIRVDTFASSGAGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTGVVV Q ERSQ KN+ +A +L A++ + Q E A I + KT +G Sbjct: 240 SAVRMTHLPTGVVVSMQDERSQIKNREKAMKILVARVADKHRQ--EAQAEIDATRKTAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++G LD+ + A + ++ Sbjct: 298 TGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIVEGKLDEIIDALILDEQ 347 >gi|157145532|ref|YP_001452851.1| peptide chain release factor 1 [Citrobacter koseri ATCC BAA-895] gi|166223546|sp|A8AG02|RF1_CITK8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|157082737|gb|ABV12415.1| hypothetical protein CKO_01275 [Citrobacter koseri ATCC BAA-895] Length = 360 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 112/337 (33%), Positives = 174/337 (51%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68 Query: 76 ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ + + + Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQDELREAKEKGEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A+++ E KR++ + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQ--AEASTRRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P V D R N+ + ++G LD ++ Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLDMLIE 342 >gi|228470795|ref|ZP_04055643.1| peptide chain release factor 1 [Porphyromonas uenonis 60-3] gi|228307468|gb|EEK16473.1| peptide chain release factor 1 [Porphyromonas uenonis 60-3] Length = 368 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 98/355 (27%), Positives = 161/355 (45%), Gaps = 20/355 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLIL 72 + V R L T DP + + L +E HL + K++ + + Sbjct: 8 IEALVARHEELETLITDPSVIADGRRFATLSKEYTHLGEILKAGAQYKQLLTQQEEAEST 67 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGTES 130 L+ + +++ + + + ++ + L + D +A LE+ AG GG E+ Sbjct: 68 LQDSDSDEELKAMARELLAEAKEESPKMEEEIKLLLLPNDPEDDKNAILELRAGTGGDEA 127 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY+R+ E + + +G G K L + G YG LK E GVHR+ Sbjct: 128 ALFAGDLFRMYSRYCETKGWNVTVSSYTEGGTGGYKEIVLNVTGTGVYGTLKYESGVHRV 187 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P D I+E + + DT+R+SGAGGQ+VN +S V Sbjct: 188 QRVPQTETQGRIHTSAATVAVLPEADKFEVN-INEGEIKWDTFRSSGAGGQNVNKVESGV 246 Query: 251 RITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 R+ + + ++C + R Q KNK +A + LR +Y+ E QK I I Sbjct: 247 RLHYPWRNPNTGVVEDITIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDEIASRR 304 Query: 303 KTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT + G + IR+Y P V D R + + VL GDL + A + + Sbjct: 305 KTMVSTGDRSAKIRTYNF-PQGRVTDHRIGLTVHNLPGVLGGDLQPIIDALIVAE 358 >gi|218886539|ref|YP_002435860.1| peptide chain release factor 1 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226739101|sp|B8DLL6|RF1_DESVM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|63852197|dbj|BAD98449.1| peptide release factor 1 [Desulfovibrio vulgaris] gi|218757493|gb|ACL08392.1| peptide chain release factor 1 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 357 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 114/345 (33%), Positives = 175/345 (50%), Gaps = 11/345 (3%) Query: 13 LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCD 68 +F +N +R L + ++ + + L + L + KE++ L D Sbjct: 1 MFAKLENLERRFEDLEQQLASSEVFNDQDRYRKLTKAHADLKEVVDVFRRYKELRQNLAD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 N LL+ A E +E I + Q L D + +E+ AG GG Sbjct: 61 NKELLDDADPEIRSMAHEEAKSLESAIPEIEQELQLLLLPKDPLDEKNTIVEIRAGTGGE 120 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMY+R+AE R +K E L ++ + G K LI G Y LK E G H Sbjct: 121 EAALFAADLFRMYSRYAEIRGWKVEILSANESDTGGYKEVIALIVGDKVYSRLKFESGTH 180 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS +++ + P + +++EI D RID +RASGAGGQHVN T+S Sbjct: 181 RVQRVPATESQGRIHTSAATVAILP-EAEEVDVEIRPDDIRIDVFRASGAGGQHVNKTES 239 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+P+G+VV CQ E+SQHKNKA+A +L ++L + E ++ + ++++G Sbjct: 240 AVRITHMPSGIVVSCQDEKSQHKNKAKAMKVLASRLLQAEQDRQ--HNEMAADRRSQVGS 297 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G +IR+Y P V D R N+ S V++G+ A Sbjct: 298 GDRSERIRTYNF-PQGRVTDHRINLTLYSLDRVMEGEAQALFDAL 341 >gi|302327519|gb|ADL26720.1| peptide chain release factor 1 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 358 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 105/351 (29%), Positives = 177/351 (50%), Gaps = 11/351 (3%) Query: 10 LGGLFDW-DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 + + D +++ L ++ +P + + + ++ + ++ A+ KE + D Sbjct: 1 MRTMKDKAKKLIEKYEELESELGNPDVLGDQARYNKIHKQYKGIEKAVLKAKEYLQMMDD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKL---EVEYKQFESLLSGEADSNDAYLEVHAGA 125 + D + ++ + K + Q + D +A LE+ G Sbjct: 61 LDEYKAALGDSDPEMVAMAKAEISEIEKKLPEVTDELQILMVPKDPWDYRNATLEIRGGT 120 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG ES +A L RMY + +K +K ++ +G G K + I+G + YG LK E Sbjct: 121 GGDESALFAGDLFRMYRGYCDKMGWKMTIQDLSEGTVGGYKEIRVFIEGDSVYGTLKFES 180 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ ++ R HTS +++ + P + +++EI E+D +DTYR+SGAGGQ++N Sbjct: 181 GVHRVQRVPETETQGRVHTSAATVAILP-EAEEVDVEIREADIHMDTYRSSGAGGQYINK 239 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVR+THIPTGVVV CQ ERSQ +N+ A MLR+K+ + + K+E+ + K Sbjct: 240 TDSAVRLTHIPTGVVVSCQTERSQLQNRLHAMEMLRSKILDAVIAKKEKE--EAANRKAL 297 Query: 306 IGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +G G + IR+Y P V D R + + V+ GDLD+ + Sbjct: 298 VGTGDRSAKIRTYNY-PQNRVTDHRIGLTVYNLDKVVTGDLDEIINGLQMA 347 >gi|121603686|ref|YP_981015.1| peptide chain release factor 1 [Polaromonas naphthalenivorans CJ2] gi|166223585|sp|A1VKB6|RF1_POLNA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|120592655|gb|ABM36094.1| bacterial peptide chain release factor 1 (bRF-1) [Polaromonas naphthalenivorans CJ2] Length = 373 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 115/353 (32%), Positives = 174/353 (49%), Gaps = 17/353 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + RL L+ + ++ + L RE + R D + Sbjct: 9 LDRQLLRLHELDALLSASDVVSDLDRFRALTREHAEASVVAEQYNRLTAREADLASAESM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130 E + + E ++ + Q + D A++E+ AG GG ES Sbjct: 69 LAEAKNDPDMAEMAEEEINAAKTDIAQLDEALQLMLIPKDPDDRRAAFIEIRAGTGGDES 128 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA------YGWLKGE 184 +A L R+YTR+AE+++++ E + E G K L I GP YG L+ E Sbjct: 129 ALFAGDLFRLYTRFAERKRWQVEIISESPSELGGYKEVVLRIDGPTDAMGVGVYGKLRFE 188 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G HR+ R+ ++ R HTS ++ V P D+++ I+I+ +D RIDTYRASGAGGQH+N Sbjct: 189 SGGHRVQRVPATETQGRIHTSACTVAVLPEPDETVAIQINPADLRIDTYRASGAGGQHIN 248 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TDSAVRITH+PTG+V +CQ+ RSQH NKAQA +L A++ E ++ + A K Sbjct: 249 KTDSAVRITHLPTGIVAECQEGRSQHGNKAQAMKVLTARI--HEKERSAQAAKDAAMRKG 306 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IG G +IR+Y P + D R N+ +++GDLDD + A + Sbjct: 307 LIGSGDRSDRIRTYNF-PQGRLTDHRINLTLYKLLTIMEGDLDDVVTALQVAR 358 >gi|115380059|ref|ZP_01467103.1| peptide chain release factor 2, programmed [Stigmatella aurantiaca DW4/3-1] gi|115362934|gb|EAU62125.1| peptide chain release factor 2, programmed [Stigmatella aurantiaca DW4/3-1] Length = 309 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 144/294 (48%), Positives = 200/294 (68%) Query: 58 FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117 + L D L+ELA E +D + QE L ++ ++ + +LSGE D ++ Sbjct: 3 AFDKALRGLDDAQTLMELAREANDEASAQEAEGLLPTLEGDIAKLELARMLSGENDRSNC 62 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 +++++AGAGGT+S DWA ML+RMYTR+ E+R ++ E ++ GEEAG K+ +L I+G A Sbjct: 63 FMDINAGAGGTDSMDWAAMLMRMYTRFCEERGWEVEISDMVAGEEAGFKNVSLHIRGEYA 122 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 YG+LK E GVHRLVRISP+D+N+RR T+F+S+ VYP VDDSI I+I E D + R G Sbjct: 123 YGYLKAEVGVHRLVRISPFDANARRQTAFASVDVYPEVDDSIRIDIPEKDYELKFIRGGG 182 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 AGGQ VN T S ++ H+PT +++ CQ ERSQ NK A+ +LRA+LYELEL+KRE + Sbjct: 183 AGGQKVNKTSSTAQLRHLPTNILITCQTERSQSANKDMAFKILRARLYELELKKREAERD 242 Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 E+ K +I +G QIRSYVL PY+MVKDLRT +E + VLDGDL+ F+ A L Sbjct: 243 AAEAQKKDISFGSQIRSYVLAPYRMVKDLRTGVETGNVDAVLDGDLEQFVTAQL 296 >gi|116749148|ref|YP_845835.1| peptide chain release factor 1 [Syntrophobacter fumaroxidans MPOB] gi|166977370|sp|A0LIZ8|RF1_SYNFM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|116698212|gb|ABK17400.1| bacterial peptide chain release factor 1 (bRF-1) [Syntrophobacter fumaroxidans MPOB] Length = 355 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 121/346 (34%), Positives = 184/346 (53%), Gaps = 12/346 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68 +FD ++ Q+ L +P L N E + + RE + + K + +L D Sbjct: 1 MFDRLESVAQKFRKLEEDLSNPELLANQKEYQKIAREHAEIAPIVEAYGLYKGLHRQLLD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127 N LLE + + + ++ L+R + E + D + LE+ AG GG Sbjct: 61 NQQLLEQETDPEMRELFRQEIAELKRQIEDTENGLKLMLAPRDPNDDKNVILEIRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ + + L RMYTR+AE R++K E L+ H G+K + G AY LK E+GV Sbjct: 121 EEAALFVSDLFRMYTRYAELRRWKVEILDSHQTGIGGLKEVIAAVNGQGAYSRLKFERGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS ++ V P + +++ I +D R+D +R+SG GGQ VNTTD Sbjct: 181 HRVQRVPVTESQGRIHTSAVTVAVLP-EAEEVDVYIDPNDLRVDVFRSSGPGGQSVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIP+G+VV CQ E+SQHKNKA+A +LRA+L L+ + E+ A I K+++G Sbjct: 240 SAVRVTHIPSGLVVICQDEKSQHKNKAKALKVLRARL--LDQMQSEQEARIARDRKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G +IR+Y P V D R N+ +L G LD+ + Sbjct: 298 TGDRSERIRTYNF-PQNRVSDHRINLTLYKLDIILGGALDEIIDPL 342 >gi|145298193|ref|YP_001141034.1| peptide chain release factor 1 [Aeromonas salmonicida subsp. salmonicida A449] gi|166223526|sp|A4SK64|RF1_AERS4 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|142850965|gb|ABO89286.1| Protein chain release factor A [Aeromonas salmonicida subsp. salmonicida A449] Length = 362 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 110/342 (32%), Positives = 182/342 (53%), Gaps = 9/342 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R + +P + + + L RE L++ + + + + + Sbjct: 9 LEGLIERHEEVQAMLGEPGVASDQDRYRALTREYAQLEDIVHAFQRFRQAEENLEATKLM 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + ++ + + Q L D N+ YLE+ AGAGG E+ Sbjct: 69 LEEDDADLREMAQEELPLAKSTLEEQEQALQVMLLPRDPKDDNNCYLEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE++ ++ + +DGE G K + G + YG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAERQGWRISIVSCNDGEHGGYKEVIAKVDGEHVYGRLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P V ++ +IEI+ +D +IDT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRVHTSACTVAVLPEVPEAEQIEINANDLKIDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ ERSQHKN+A+A ++L A+L E ++ + + +G G Sbjct: 249 THLPTGLVVECQDERSQHKNRAKAMSVLSARLQAAEDERHRAAEQ--STRRNLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P + + R N+ ++++GDLD + + Sbjct: 307 ERIRTYNY-PQGRLSEHRINLTLYRLGEIMEGDLDCIISPMI 347 >gi|225849764|ref|YP_002729998.1| peptide chain release factor 1 [Persephonella marina EX-H1] gi|254790894|sp|C0QTI3|RF1_PERMH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|225646004|gb|ACO04190.1| peptide chain release factor 1 [Persephonella marina EX-H1] Length = 361 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 128/346 (36%), Positives = 187/346 (54%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +N ++L L DP + ++ + + + +E + + KE + L D L Sbjct: 10 LENIDEKLKKLEAALSDPEVLKDQKKLQQVAKEHKETEKLSKLYKEYKKVLKDIEETKSL 69 Query: 76 ALEEDDCSILQETS---DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 D+ L + QR + + Q E L D + LE+ GAGG E+ Sbjct: 70 LNNPDEEMRLLAEEELKNLNQRKEELEKEIQIELLPKDPNDEKNVILEIRQGAGGEEAAL 129 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY R+AE++ +K E L +H + GIK LIKG AY LK E GVHR+ R Sbjct: 130 FAGELFRMYQRYAERKGWKVEVLSMHPTDRGGIKEVIALIKGQGAYSRLKFESGVHRVQR 189 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S+ R HTS +++ V P + ++IEI + +I+T RASGAGGQHVNTTDSAVRI Sbjct: 190 VPETESSGRIHTSTATVAVLP-EAEEVDIEIKPEELKIETMRASGAGGQHVNTTDSAVRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV CQ ERSQ +N+A+A +LRA+L + R E I + + ++G G Sbjct: 249 THIPTGIVVSCQDERSQLQNRAKAMQILRARLKDYYD--RLEREKIEKERRMQVGTGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N D+LDGDLD+ + +A ++ Sbjct: 307 EKIRTYNF-PQNRVTDHRINYTSHRLHDILDGDLDEIIDQLIAKEQ 351 >gi|161506411|ref|YP_001573523.1| hypothetical protein SARI_04609 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160867758|gb|ABX24381.1| hypothetical protein SARI_04609 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 293 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 171/290 (58%), Positives = 208/290 (71%), Gaps = 1/290 (0%) Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ A Sbjct: 3 QGLDDVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQA 62 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTE+QDWA+MLLRMY RWAE R FKTE +E +GE AGIKSAT+ I G AYGWL+ Sbjct: 63 GSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLRT 122 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHV Sbjct: 123 ETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHV 182 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K Sbjct: 183 NRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTK 242 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 ++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 243 SDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291 >gi|300692007|ref|YP_003753002.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia solanacearum PSI07] gi|299079067|emb|CBJ51729.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia solanacearum PSI07] Length = 300 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 158/298 (53%), Positives = 220/298 (73%), Gaps = 1/298 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + + ++ + L L ELA EE D ++ + ++ VE +F + SG D+ Sbjct: 2 VFALTKLDEDLNGGAELFELAREEGDDDTVEAVEADTAGMRAIVEDMEFRRMFSGPMDAA 61 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 + ++++ AGAGGTE+ DWA+MLLR Y ++ E++ FKTE LE +G+ AGIKSA++ ++G Sbjct: 62 NCFIDIQAGAGGTEACDWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASIKVEGE 121 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A+G+L+ E GVHRLVR SP+DS RHTSFSSI+VYP VDDSIEIE++ +D R+DTYRA Sbjct: 122 YAFGFLRTETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRA 181 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQH+N TDSAVRITHIP+G+VVQCQ +RSQH+N+A+A ML+++LYE EL+KR+ Sbjct: 182 SGAGGQHINKTDSAVRITHIPSGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAE 241 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 A+ E+SKT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 242 ADKLEASKTDVGWGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDTFIEASLKQ 298 >gi|28378950|ref|NP_785842.1| peptide chain release factor 1 [Lactobacillus plantarum WCFS1] gi|254557155|ref|YP_003063572.1| peptide chain release factor 1 [Lactobacillus plantarum JDM1] gi|300766721|ref|ZP_07076638.1| peptide chain release factor RF1 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308181160|ref|YP_003925288.1| peptide chain release factor 1 [Lactobacillus plantarum subsp. plantarum ST-III] gi|32171522|sp|Q88UT2|RF1_LACPL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|28271787|emb|CAD64693.1| peptide chain release factor 1 [Lactobacillus plantarum WCFS1] gi|254046082|gb|ACT62875.1| peptide chain release factor 1 [Lactobacillus plantarum JDM1] gi|300495821|gb|EFK30972.1| peptide chain release factor RF1 [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308046651|gb|ADN99194.1| peptide chain release factor 1 [Lactobacillus plantarum subsp. plantarum ST-III] Length = 360 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 104/352 (29%), Positives = 176/352 (50%), Gaps = 12/352 (3%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLC 67 FD R L DP + + L +E ++ + + ++ Sbjct: 3 KFFDKLQAVADRYEELGELLSDPEVISDSQRFMKLSKEMGNIRETVEKYNHYKEVTSQIE 62 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAG 126 +N LL L+++ +++++ NL K + L D + +E+H AG Sbjct: 63 ENDELLHEKLDDEMNAMVKDDLKNLNAEKDQLEHEITLLMLPKDPNDDKNIIMEIHGAAG 122 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L MY+++AE++ ++ E + ++ E G K L+I G Y LK E G Sbjct: 123 GDEASLFAADLFNMYSKYAERQGWQVEVADRNETEVGGFKEIVLIISGDKVYSKLKYESG 182 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P ++I+I + D R D +R+SGAGGQH+N T Sbjct: 183 AHRVQRVPVTESAGRVHTSTATVGVMP-EAQDVDIDIDQKDIRTDVFRSSGAGGQHINKT 241 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+TH+PTG+VV Q +RSQ +N+A+A +LRA++Y+ + E K+ + Sbjct: 242 SSAVRMTHLPTGIVVSMQDQRSQQQNRAKAMEILRARVYDYYQSR--EQNEYDAERKSAV 299 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R + V++G+LD+ + A + + Sbjct: 300 GTGDRSERIRTYNF-PQNRVTDHRIGLTLNKLDRVMNGELDEVIDALVLADQ 350 >gi|118594305|ref|ZP_01551652.1| peptide chain release factor 1 [Methylophilales bacterium HTCC2181] gi|118440083|gb|EAV46710.1| peptide chain release factor 1 [Methylophilales bacterium HTCC2181] Length = 359 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 112/344 (32%), Positives = 182/344 (52%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + RL LN + +++ K + +E + + +E D E+ Sbjct: 9 LNALQNRLEELNDELSSEEATKDMDRYKKISKEHSDILPVVDIYQEFTRHTKDMNDAKEM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134 + + S Q+ D + + +E + L D + +LE+ AGAGG ES +A Sbjct: 69 LSDPEMKSFAQDEIDANKAKIIMLEEQLQTLLLPKDPNDEKNIFLEIRAGAGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 + RMY+R+AE+ +++ E + ++ E G K + G AY LK E G HR+ R+ Sbjct: 129 GDIFRMYSRYAERMRWQLEVISSNESEVGGFKEIIAKVIGQGAYSKLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V D+ +++I+ +D RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 189 DTETQGRIHTSACTVAVLAEADEISDVDINPADIRIDTYRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 PTG+VV+CQ +RSQH+NKAQA ++L A++ + ++ ++ + I K+ IG G + Sbjct: 249 APTGIVVECQDDRSQHRNKAQAMSILAARIKDAQI--NDQQSKIATERKSLIGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ V+DGDL + + + + Sbjct: 307 IRTYNF-PQGRITDHRINLTLYKIDFVMDGDLTELIDNLTSEHQ 349 >gi|317495271|ref|ZP_07953641.1| peptide chain release 1 [Gemella moribillum M424] gi|316914693|gb|EFV36169.1| peptide chain release 1 [Gemella moribillum M424] Length = 362 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 121/356 (33%), Positives = 194/356 (54%), Gaps = 14/356 (3%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ--- 63 + LG + +R LN DP + + + +E++ ++ ++ +E + Sbjct: 1 MEILGQ---LEVVEERYEKLNELLSDPDVVSDTKKLMEYSKEQRSIEKTVAVFREYKNIV 57 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVH 122 ++ D LLE+ +++ ++QE L+ E + L D + +EV Sbjct: 58 QQIADTKELLEIEEDKEMKEMMQEEIKELEPSLAPMEEELKILLLPKDPNDGKNVVVEVR 117 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGG E+Q +A LLRMYTR+AE + +K + LE + GIK A +I G + Y +K Sbjct: 118 GAAGGDEAQLFAGDLLRMYTRFAESQGWKVDVLERSETGIGGIKEAIFIISGEDVYSKMK 177 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G HR+ R+ +S+ R HTS +++ V P + IEI+I+E+D R+DT+ +SGAGGQ Sbjct: 178 FESGAHRVQRVPTTESSGRIHTSTATVVVLP-EAEEIEIDINENDIRVDTFASSGAGGQS 236 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTT SAVR+THIPTGVVV Q ERSQ KNK +A +LRA++Y+ ++EE A Sbjct: 237 VNTTMSAVRLTHIPTGVVVSMQDERSQIKNKEKAMKVLRARVYDKY--QQEEQAKFDAER 294 Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+++G G +IR+Y P V D R + +++G LD+ ++A ++ Sbjct: 295 KSKVGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEVLEALRIAEQ 349 >gi|261416348|ref|YP_003250031.1| peptide chain release factor 1 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372804|gb|ACX75549.1| peptide chain release factor 1 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 355 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 104/343 (30%), Positives = 174/343 (50%), Gaps = 10/343 (2%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 +++ L ++ +P + + + ++ + ++ A+ KE + D Sbjct: 6 KKLIEKYEELESELGNPDVLGDQARYNKIHKQYKGIEKAVLKAKEYLQMMDDLDEYKAAL 65 Query: 77 LEEDDCSILQETSDNLQRIKL---EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 + D + ++ + K + Q + D +A LE+ G GG ES + Sbjct: 66 GDSDPEMVAMAKAEISEIEKKLPEVTDELQILMVPKDPWDYRNATLEIRGGTGGDESALF 125 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A L RMY + +K +K ++ +G G K + I+G + YG LK E GVHR+ R+ Sbjct: 126 AGDLFRMYRGYCDKMGWKMTIQDLSEGTVGGYKEIRVFIEGDSVYGTLKFESGVHRVQRV 185 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 ++ R HTS +++ + P + +++EI E+D +DTYR+SGAGGQ++N TDSAVR+T Sbjct: 186 PETETQGRVHTSAATVAILP-EAEEVDVEIREADIHMDTYRSSGAGGQYINKTDSAVRLT 244 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ-- 311 HIPTGVVV CQ ERSQ +N+ A MLR+K+ + + K+E+ + K +G G + Sbjct: 245 HIPTGVVVSCQTERSQLQNRLHAMEMLRSKILDAVIAKKEKE--EAANRKALVGTGDRSA 302 Query: 312 -IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 IR+Y P V D R + + V+ GDLD+ + Sbjct: 303 KIRTYNY-PQNRVTDHRIGLTVYNLDKVVTGDLDEIINGLQMA 344 >gi|303326242|ref|ZP_07356685.1| peptide chain release factor 1 [Desulfovibrio sp. 3_1_syn3] gi|302864158|gb|EFL87089.1| peptide chain release factor 1 [Desulfovibrio sp. 3_1_syn3] Length = 356 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 107/341 (31%), Positives = 165/341 (48%), Gaps = 10/341 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLIL 72 + ++ L P ++ + + L + L + + +Q + +N L Sbjct: 5 LEGLEKKYMELEEALAQPDVFNDQEHYRKLTKAHADLREIVDLFRRHRALQQEMAENKQL 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L + +E + + + L + D + LE+ AG GG E+ Sbjct: 65 LHDEDPDIRDMAHEEIRRAESELPRIEQALKVALLPTDPLDEKNTILEIRAGTGGEEAAL 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMYTR+AE + +K E + E G K LI G Y LK E G HR+ R Sbjct: 125 FAADLFRMYTRYAELQGWKVEIMSESPSESGGYKEIICLIAGDRVYSRLKFEAGTHRVQR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ V P + +++EI D RID YRASGAGGQHVN T+SAVRI Sbjct: 185 VPATETQGRIHTSAATVAVMP-EAEEVDVEIRPEDLRIDIYRASGAGGQHVNKTESAVRI 243 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PT VV CQ ERSQHKNKA+A +L +++ E +++ + K ++G G Sbjct: 244 THLPTNTVVTCQDERSQHKNKARAMKVLASRILAAERERQNSE--LSADRKAQVGSGDRS 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P D R N+ S +++G+L A Sbjct: 302 ERIRTYNF-PQGRCTDHRINLTLYSLDRIMEGELTPLFDAL 341 >gi|332687009|ref|YP_004456783.1| peptide chain release factor 1 [Melissococcus plutonius ATCC 35311] gi|332371018|dbj|BAK21974.1| peptide chain release factor 1 [Melissococcus plutonius ATCC 35311] Length = 358 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 104/347 (29%), Positives = 169/347 (48%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL---CDNLIL 72 R L DP + + L +E +L + + + + D L Sbjct: 5 LQAIEDRYEELGELLSDPEIISDTNRFLKLSKEEANLRETVEVYRRYKQVIQGIKDTEEL 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L +LE + + +E L++ K + + + L D + +E+ AGG E+ Sbjct: 65 LGESLESEMLEMAKEELSELKQEKEVLGDRIKILLLPKDPNDDKNIIMEIRGAAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MY ++AE + +K E ++ + G K ++I G N + LK E G HR+ Sbjct: 125 LFAGNLFSMYQKYAELQGWKIEVMDANITGIGGYKEVIMMITGENVFSKLKYESGAHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + +EI++ + D R D Y ASGAGGQH+N T SAVR Sbjct: 185 RVPSTESQGRIHTSTATVVVMP-EAEEVEIDLEDKDIRTDIYHASGAGGQHINKTASAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q ERSQ KN+ +A +LR ++Y+ ++E + K+ +G G Sbjct: 244 LTHLPTGIVVAMQDERSQLKNREKAMKILRTRVYD--QLQQEAQSAYDADRKSAVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + VL G LD+ + A + + Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTLQKLDQVLSGKLDEIIDALVLYDQ 347 >gi|313622330|gb|EFR92817.1| peptide chain release factor 1 [Listeria innocua FSL J1-023] Length = 358 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 103/347 (29%), Positives = 172/347 (49%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R LN DP + + + L +E+ + + +E ++ EL Sbjct: 5 LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNINEQIDETREL 64 Query: 76 ALEEDDCSILQETSDNLQRIKL----EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E+ D + + + ++ E + + D + LE+ AGG E+ Sbjct: 65 LGEKLDDEMREMAKEEFAELQKEKTELEERLKLLLVPKDPNDDKNVILEIRGAAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+++AE R +K E ++ + G K ++ G +A+ +K E G HR+ Sbjct: 125 LFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ + P + +EIE+ + D R DT+ ++GAGGQ VNTT SAVR Sbjct: 185 RVPETESGGRIHTSTATVAILP-EAEEVEIELHDKDIRTDTFASTGAGGQSVNTTMSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTG+VV Q ERSQ KNK +A +LRA++Y+ +RE + K+ +G G Sbjct: 244 LTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKF--EREAREEYDANRKSAVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +++G LD+ + A + + Sbjct: 302 SERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQ 347 >gi|311033344|ref|ZP_07711434.1| peptide chain release factor 1 [Bacillus sp. m3-13] Length = 356 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 113/351 (32%), Positives = 176/351 (50%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68 +FD R L DP + + + + +E+ + + +E + ++L D Sbjct: 1 MFDRLQAVEMRYEKLTELLSDPEVISDTKKLREYSKEQSDIQETVEAYREYKAVKEQLDD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127 +LE L+ D +++E L+ + + + L D + +E+ AGG Sbjct: 61 AKAMLEDKLDADMREMVKEEIAELEEQQENLADRLHILLLPKDPNDDKNVIMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R+AE + +KTE +E G K +I G AY LK E G Sbjct: 121 DEAALFAGDLYRMYSRYAEAQGWKTEVMEAASTGVGGYKEIIFMITGKGAYSKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +EIEI + D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EAEEVEIEIHDKDIRVDTFASSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPT VV CQ E+SQ KNK +A +LRA++Y+ +RE A + K +G Sbjct: 240 SAVRLTHIPTNTVVSCQDEKSQIKNKEKAMKVLRARVYDKF--QREVQAEYDANRKQAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L G L + + A + + Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLQEVIDALIMEDQ 347 >gi|325479514|gb|EGC82610.1| peptide chain release factor 1 [Anaerococcus prevotii ACS-065-V-Col13] Length = 358 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 116/351 (33%), Positives = 186/351 (52%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ ++ + L K DP + ++ + + RE L + +I++ Sbjct: 1 MFENIEHIKENYKDLEKKMIDPEVLSDIAKLTKITREYNSLKPIVEKYDQIKEAEDTIEE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKL----EVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 EL E DD +++ + ++ + E + + DS D +E+ GAGG Sbjct: 61 NKELINEADDQDMVEMLKEEIKENEKLLDEYNEEMKILLIPKDPNDSRDVIIEIRPGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY +A+K +KTE +E+ GIK AT +I+G AY K E GV Sbjct: 121 DEAGLFAGDLYRMYHMYADKEGYKTEDVEVSSQGVGGIKDATFMIRGEGAYSRFKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P VD+ + +D R D +R+SG GGQ VNTTD Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEVDELDV-HVDPNDIRTDVFRSSGNGGQSVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+VV Q E+SQ KNK +A +L A++YELE +KR + I ++ K+++G Sbjct: 240 SAVRLTHIPTGIVVSMQDEKSQIKNKEKAMRILLARIYELEEEKRNKE--IADNRKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P + D R N D L+G++ + + + + + Sbjct: 298 TGDRSERIRTYNF-PQGRITDHRINKTIYQLDDFLNGNIGEMIDSLIEEDQ 347 >gi|295097429|emb|CBK86519.1| bacterial peptide chain release factor 2 (bRF-2) [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 293 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 167/290 (57%), Positives = 207/290 (71%), Gaps = 1/290 (0%) Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ A Sbjct: 3 QGLEDVSGLLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDIQA 62 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTE+QDWA+ML+RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 63 GSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKIIGDYAYGWLRT 122 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS RRHTSFSS +VYP VD+ I+I+I+ +D RID YRASGAGGQHV Sbjct: 123 ETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDEDIDIDINPADLRIDVYRASGAGGQHV 182 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K Sbjct: 183 NRTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNK 242 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 ++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 243 SDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291 >gi|217967791|ref|YP_002353297.1| peptide chain release factor 2 [Dictyoglomus turgidum DSM 6724] gi|217336890|gb|ACK42683.1| peptide chain release factor 2 [Dictyoglomus turgidum DSM 6724] Length = 330 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 150/316 (47%), Positives = 205/316 (64%), Gaps = 3/316 (0%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W N + K ++ + L I ++++ + + +L E D+ E Sbjct: 8 WDNSEKVKPILTKFNKLQKEIESWEKLKTDIEELSEWKDLLEEGDEYKEEFEKKLKEV-- 65 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + ++ + E +L D +A L +HAG GGT++QDW +LLRMY RWAE++ ++ + L Sbjct: 66 EKSLKNFEIEMVLQDPHDEANAVLSLHAGTGGTDAQDWTEILLRMYIRWAERKGYQVKIL 125 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 +I GEEAGIKSATLLI+G AYG+LKGE+GVHRLVRISP+D+N RRHTSF+ + V P + Sbjct: 126 DISPGEEAGIKSATLLIEGDKAYGYLKGEKGVHRLVRISPFDANHRRHTSFALVEVIPEL 185 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 +S IEI D +I+T+RA GAGGQHVN +SAVRITHIPTG+VVQCQ ERSQH NK Sbjct: 186 PES-TIEIKPEDLKIETFRAGGAGGQHVNKVESAVRITHIPTGIVVQCQNERSQHANKEM 244 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A +L+A+L ELE +KR E + EI WG QIRSYV PY +VKD RT +E + Sbjct: 245 ALRVLKARLEELEERKRREKIASLKGEVQEISWGNQIRSYVFHPYTLVKDHRTGLEIGNV 304 Query: 336 SDVLDGDLDDFMKATL 351 V+DG++D F++A L Sbjct: 305 QAVIDGEIDPFIEAYL 320 >gi|47558934|gb|AAT35567.1| protein release factor 1 [Chlamydia trachomatis] Length = 359 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 110/338 (32%), Positives = 173/338 (51%), Gaps = 11/338 (3%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI----QDRLCDNLILLELA 76 +RL + + DP+++ N E L +E L + + + + D L L Sbjct: 10 KRLEEVEKQISDPNIFSNPKEYSSLSKEHARLSEIKNAHESLVATKKILQDDKLALSTEK 69 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 E + + + ++ + + + D +E+ AG GG E+ + Sbjct: 70 DPEIVAMLEEGVLVGEEAVERLSKQLENLLIPPDPDDDLSVIMELRAGTGGDEAALFVGD 129 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 +RMY +A + ++ E L + + G K + I G + +L+ E G HR+ R+ Sbjct: 130 CVRMYHLYAASKGWQCEVLSASESDLGGYKEYVMGISGASVKRFLQYEAGTHRVQRVPET 189 Query: 197 DSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 ++ R HTS ++ V P +D E+ I E D RIDT+R+SGAGGQHVN TDSAVRITHI Sbjct: 190 ETQGRVHTSAVTVAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSAVRITHI 249 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 P+GVVV CQ ERSQHKNKA+A +L+A++ + E+QKR + A+ S ++G G +I Sbjct: 250 PSGVVVTCQDERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRS--AQVGSGDRSERI 307 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 R+Y P V D R + + V++G+LD A Sbjct: 308 RTYNF-PQNRVTDHRIALTLYNLDRVMEGELDMITTAL 344 >gi|90417430|ref|ZP_01225354.1| peptide chain release factor 2 [marine gamma proteobacterium HTCC2207] gi|90330764|gb|EAS46039.1| peptide chain release factor 2 [marine gamma proteobacterium HTCC2207] Length = 310 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 161/308 (52%), Positives = 219/308 (71%), Gaps = 1/308 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 RER L+ + I+++ + D+ LL +A+EEDD + + + ++ ++ +F Sbjct: 2 GRERSALEAVVKTIEDLDTGVADSRELLAMAVEEDDADTVADVETEIAALEAQLAKLEFR 61 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 + SGE D N+AYL++ +G+GGTE+QDWA MLLRMY RWA+ + FK E +E G+ AGI Sbjct: 62 RMFSGEMDPNNAYLDIQSGSGGTEAQDWAEMLLRMYLRWADDKGFKAELVECSAGDVAGI 121 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K AT+ I G AYGWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ Sbjct: 122 KGATVQISGEYAYGWLRTEIGVHRLVRKSPFDSGNRRHTSFSAVYVSPEIDDNIEIDINP 181 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD R DTYRASGAGGQH+N TDSAVR+TH P+G+VVQ Q +RSQH+N+ + W MLRAKLY Sbjct: 182 SDVRTDTYRASGAGGQHINKTDSAVRLTHGPSGIVVQSQSQRSQHQNRDKCWQMLRAKLY 241 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ELE+ R++ A E +K++IGWG QIRSYVL +KDLRT +E + VLDG LD Sbjct: 242 ELEVSIRQKAAQATEDTKSDIGWGSQIRSYVLDD-ARIKDLRTGVETRNTGAVLDGKLDQ 300 Query: 346 FMKATLAI 353 F+ A+L Sbjct: 301 FIVASLKA 308 >gi|108800851|ref|YP_641048.1| peptide chain release factor 1 [Mycobacterium sp. MCS] gi|119869991|ref|YP_939943.1| peptide chain release factor 1 [Mycobacterium sp. KMS] gi|126436449|ref|YP_001072140.1| peptide chain release factor 1 [Mycobacterium sp. JLS] gi|119361564|sp|Q1B542|RF1_MYCSS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223572|sp|A3Q3C2|RF1_MYCSJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223573|sp|A1UJZ5|RF1_MYCSK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|108771270|gb|ABG09992.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp. MCS] gi|119696080|gb|ABL93153.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp. KMS] gi|126236249|gb|ABN99649.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp. JLS] Length = 357 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 116/346 (33%), Positives = 171/346 (49%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + + L + DP L + +A+ R L ++ ++++ D EL Sbjct: 8 IDALLAEHADLERQLADPALHADAGKARKAGRRFAQLAPIVATYRKLEAARGDLEAAREL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 ++ + + D++D LEV +G GG ES +A Sbjct: 68 GADDASFAAEVPELEATVDQLETQLSDLL--APRDPHDADDIVLEVKSGEGGEESALFAA 125 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190 L RMY R+AE+ + L+ + G K ATL I+ + LK E GVHR+ Sbjct: 126 DLARMYIRYAERHGWSVTILDETTSDLGGYKDATLSIRSKGDSADGVWSRLKFEGGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS + + VYP ++ +++I ESD RID YR+SG GGQ VNTTDSAV Sbjct: 186 QRVPVTESQGRVHTSAAGVLVYPEPEEVEQVQIDESDLRIDVYRSSGKGGQGVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG+VV CQ ERSQ +NKA+A +L A+L L ++ A+ +S+ + Sbjct: 246 RITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQSLAEEQASADASADRASQIRTVDRS 305 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N + + VLDGDLD A A K Sbjct: 306 ERIRTYNF-PENRIADHRINFKAHNLDQVLDGDLDPLFDALAAADK 350 >gi|15606216|ref|NP_213594.1| peptide chain release factor RF-1 [Aquifex aeolicus VF5] gi|6225940|sp|O67032|RF1_AQUAE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|2983407|gb|AAC06991.1| peptide chain release factor RF-1 [Aquifex aeolicus VF5] Length = 362 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 122/345 (35%), Positives = 189/345 (54%), Gaps = 10/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL---DNAISFIKEIQDRLCDNLIL 72 D ++ L + P + Q+V + K L +E + L + K+ Q L + L Sbjct: 10 LDKLQEKYRKLQEELSKPEVIQDVEKYKKLSKELKELQEINELYERYKKAQKELKEAKEL 69 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L+ + ++ +E + + +K E + + D+ + LE+ AGAGG E+ Sbjct: 70 LKSSDKDLRELAEEEVNRLTEEMKKLEEELKVHLVPKDPNDTKNVILEIRAGAGGEEAAL 129 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY ++AE++ +K L + G K LI+G AY LK E GVHR+ R Sbjct: 130 FAADLFRMYQKYAEEKGWKVSILSSNKTGLGGYKEVIALIEGEGAYSRLKYESGVHRVQR 189 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S+ R HTS +++ V P VD++ I + +I+T+RASGAGGQ+VNTT++AVRI Sbjct: 190 VPVTESSGRIHTSTATVAVLPEVDETDIK-IKPEELKIETFRASGAGGQYVNTTETAVRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311 THIPTG+VVQCQ ERSQ +NK +A +L AKL + +K++E I + K ++G G + Sbjct: 249 THIPTGIVVQCQDERSQFQNKQKALKILYAKLKDYYERKKQEE--IAKERKEQVGTGERS 306 Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P V D R N+ DVL+G LD+ + A A + Sbjct: 307 EKIRTYNF-PQNRVTDHRINLTLYKLQDVLEGKLDEIIDALRAKE 350 >gi|114569849|ref|YP_756529.1| peptide chain release factor 2 [Maricaulis maris MCS10] gi|114340311|gb|ABI65591.1| bacterial peptide chain release factor 2 (bRF-2) [Maricaulis maris MCS10] Length = 321 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 189/313 (60%), Positives = 237/313 (75%), Gaps = 4/313 (1%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRER L+ AI+ + E + D+L ++ELA EDD +++E L + + Q E Sbjct: 1 MRERNRLEAAITTVVEAEQEYSDSLEIIELAEMEDDAEMVEEAVAGLNALAERMRRAQLE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGEAD NDA++E+H+GAGGTESQDWA ML RMY+RWA +K E +E GEEAG+ Sbjct: 61 TLLSGEADGNDAFVEIHSGAGGTESQDWAAMLARMYSRWANAHGYKVETMEEQAGEEAGL 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KS T+L+KG NAYGWLK E GVHRLVRISP+DS++RRHTSFSS+ VYP +DD+I+++I Sbjct: 121 KSTTILVKGENAYGWLKTEAGVHRLVRISPFDSSARRHTSFSSVGVYPQIDDAIDVDIDV 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPT----GVVVQCQQERSQHKNKAQAWNMLR 281 S R DTYRASGAGGQH+N TDSAVR+T+ VVVQCQ +RSQHKN++QAW+MLR Sbjct: 181 SKVRTDTYRASGAGGQHINKTDSAVRLTYDMPGEEKPVVVQCQNDRSQHKNRSQAWDMLR 240 Query: 282 AKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 A++YE+ELQ+RE A SK+EIGWG QIRSYVLQPYQMVKDLRTN+E ++ VLDG Sbjct: 241 ARVYEIELQRREAAAQAEADSKSEIGWGHQIRSYVLQPYQMVKDLRTNVETSNTGGVLDG 300 Query: 342 DLDDFMKATLAIK 354 DLDDFM A LA + Sbjct: 301 DLDDFMAAALAAR 313 >gi|161615988|ref|YP_001589953.1| hypothetical protein SPAB_03788 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|213425820|ref|ZP_03358570.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213646961|ref|ZP_03377014.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|238909840|ref|ZP_04653677.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289823819|ref|ZP_06543431.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|16421591|gb|AAL21916.1| peptide chain release factor RF-2 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161365352|gb|ABX69120.1| hypothetical protein SPAB_03788 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|261248173|emb|CBG26009.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|301159597|emb|CBW19116.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914062|dbj|BAJ38036.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320087470|emb|CBY97235.1| Peptide chain release factor 1 RF-1 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321225716|gb|EFX50770.1| Peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322613439|gb|EFY10380.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621031|gb|EFY17889.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624095|gb|EFY20929.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628166|gb|EFY24955.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633285|gb|EFY30027.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636137|gb|EFY32845.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639476|gb|EFY36164.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647592|gb|EFY44081.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648776|gb|EFY45223.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653831|gb|EFY50157.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322657937|gb|EFY54205.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664040|gb|EFY60239.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668949|gb|EFY65100.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673057|gb|EFY69164.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677952|gb|EFY74015.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681128|gb|EFY77161.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687942|gb|EFY83909.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194862|gb|EFZ80049.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323196613|gb|EFZ81761.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202687|gb|EFZ87727.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207826|gb|EFZ92772.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323212622|gb|EFZ97439.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214895|gb|EFZ99643.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323222626|gb|EGA06991.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225095|gb|EGA09347.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230617|gb|EGA14735.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235032|gb|EGA19118.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323239071|gb|EGA23121.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244571|gb|EGA28577.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247186|gb|EGA31152.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253331|gb|EGA37160.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256362|gb|EGA40098.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262462|gb|EGA46018.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267442|gb|EGA50926.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269154|gb|EGA52609.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326624786|gb|EGE31131.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332989908|gb|AEF08891.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 293 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 170/290 (58%), Positives = 208/290 (71%), Gaps = 1/290 (0%) Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ A Sbjct: 3 QGLDDVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQA 62 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTE+QDWA+MLLRMY RWAE R FKTE +E +GE AGIKSAT+ I G AYGWL+ Sbjct: 63 GSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLRT 122 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHV Sbjct: 123 ETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHV 182 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K Sbjct: 183 NRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTK 242 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 ++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 243 SDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291 >gi|300704641|ref|YP_003746244.1| peptide chain release factor rf-2; programmed frameshift [Ralstonia solanacearum CFBP2957] gi|299072305|emb|CBJ43638.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia solanacearum CFBP2957] Length = 300 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 158/298 (53%), Positives = 219/298 (73%), Gaps = 1/298 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + + ++ + L L ELA EE D ++ + ++ VE +F + SG D+ Sbjct: 2 VFALTKLDEDLTGGAELFELAREEGDDDTIEAIETDTAGMRAIVEDMEFRRMFSGPMDAA 61 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 + ++++ AGAGGTE+ DWA+MLLR Y ++ E++ FK E LE +G+ AGIKSA++ ++G Sbjct: 62 NCFIDIQAGAGGTEACDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSASIKVEGE 121 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A+G+L+ E GVHRLVR SP+DS RHTSFSSI+VYP VDDSIEIE++ +D R+DTYRA Sbjct: 122 YAFGFLRTETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRA 181 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQH+N TDSAVRITHIPTG+VVQCQ +RSQH+N+A+A ML+++LYE EL+KR+ Sbjct: 182 SGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAE 241 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 A+ E+SKT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 242 ADKLEASKTDVGWGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDAFIQASLKQ 298 >gi|302759937|ref|XP_002963391.1| hypothetical protein SELMODRAFT_141857 [Selaginella moellendorffii] gi|300168659|gb|EFJ35262.1| hypothetical protein SELMODRAFT_141857 [Selaginella moellendorffii] Length = 412 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 106/347 (30%), Positives = 180/347 (51%), Gaps = 12/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+A Q L K DP + + E + L + ++ ++ ++ ++ + L E+ Sbjct: 59 LDSAEQTYKELTVKLADPDVANDPSEFQKLAKAIADMEEVVTSYQKYKESQRELDDLQEM 118 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 D + + + +K + + L S DS + LEV AG GG E+ Sbjct: 119 IKSSGDKELAEMAVEESAILKENITNLEEYLKVLLLPSDPLDSRNIMLEVRAGTGGDEAG 178 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 WA L+RMY ++AE+ ++ + + E+ G K L I G Y LK E GVHR+ Sbjct: 179 IWAGDLVRMYQKYAEQNRWNWSPISQTEAEKGGFKEYVLEITGDRVYSKLKYESGVHRVQ 238 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ + P D +E+ I D + T R+ GAGGQ+VN ++AV Sbjct: 239 RVPATESQGRVHTSTATVAIMP-EVDEVEVVIDPKDIELTTARSGGAGGQNVNKVETAVD 297 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 + H PTG+ + C +ER+Q KNKA+A+ +LRAKLYE++L +++E I ++++G G Sbjct: 298 LFHKPTGIRIFCTEERTQLKNKARAFQLLRAKLYEMKLAEQQE--KISSQRRSQVGTGAR 355 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D RT I L G+++ ++A A+++ Sbjct: 356 SEKIRTYNYKD-NRVSDHRTKI-NFDLDSFLSGNIESAVQACAAVEQ 400 >gi|114561906|ref|YP_749419.1| peptide chain release factor 1 [Shewanella frigidimarina NCIMB 400] gi|119361604|sp|Q087I4|RF1_SHEFN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|114333199|gb|ABI70581.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella frigidimarina NCIMB 400] Length = 361 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 114/339 (33%), Positives = 184/339 (54%), Gaps = 9/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72 + ++R + D + + + L +E L++ +S K Q D + Sbjct: 9 LEGLLERNEEVLALLSDATVISDQDRFRGLSKEYSQLEDVVSSFKAFQQAQKDFDYAKEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 LE E E + Q ++ + Q L + D +A+LE+ AGAGG E+ Sbjct: 69 LEEDDLEMREMAQDEYKQSKQVLEKLEDELQVLLLPTDPNDDTNAFLEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+ E +++ E + +++GE G K + I G AYG LK E G HR+ R Sbjct: 129 FAGDLYRMYSRYCEANRWQMEVMNVNEGEHGGFKEIIVKISGDGAYGKLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V V ++ I I+ +D ++DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRVHTSACTVVVLHEVPEAEAISINAADLKVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIP+G++V+CQ +RSQHKN+AQA ++L A++ +E +KR + ++ + G Sbjct: 249 THIPSGIIVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEET--TRRSLVASGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +IR+Y P V D R N+ ++V++GDL+ + Sbjct: 307 ERIRTYNY-PQGRVSDHRINLTLYRLNEVMEGDLNVLLD 344 >gi|296104552|ref|YP_003614698.1| peptide chain release factor 2 [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059011|gb|ADF63749.1| peptide chain release factor 2 [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 293 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 168/290 (57%), Positives = 207/290 (71%), Gaps = 1/290 (0%) Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ A Sbjct: 3 QGLEDVSGLLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDIQA 62 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTE+QDWA+ML+RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 63 GSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKIIGDYAYGWLRT 122 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS RRHTSFSS +VYP VD+ I+IEI+ +D RID YRASGAGGQHV Sbjct: 123 ETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDEDIDIEINPADLRIDVYRASGAGGQHV 182 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K Sbjct: 183 NRTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNK 242 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 ++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 243 SDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291 >gi|83748475|ref|ZP_00945497.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Ralstonia solanacearum UW551] gi|207725248|ref|YP_002255644.1| peptide chain release factor 2 (rf-2) protein [Ralstonia solanacearum MolK2] gi|207743623|ref|YP_002260015.1| peptide chain release factor 2 (rf-2) protein [Ralstonia solanacearum IPO1609] gi|83724886|gb|EAP72042.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Ralstonia solanacearum UW551] gi|206590482|emb|CAQ37444.1| peptide chain release factor 2 (rf-2) protein [Ralstonia solanacearum MolK2] gi|206595022|emb|CAQ61949.1| peptide chain release factor 2 (rf-2) protein [Ralstonia solanacearum IPO1609] Length = 300 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 158/298 (53%), Positives = 219/298 (73%), Gaps = 1/298 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + + ++ + L L ELA EE D ++ + ++ VE +F + SG D+ Sbjct: 2 VFALTKLDEDLTGGAELFELAREEGDDDTIEAIEADTAGMRAIVEDMEFRRMFSGPMDAA 61 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 + ++++ AGAGGTE+ DWA+MLLR Y ++ E++ FK E LE +G+ AGIKSA++ ++G Sbjct: 62 NCFIDIQAGAGGTEACDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSASIKVEGE 121 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A+G+L+ E GVHRLVR SP+DS RHTSFSSI+VYP VDDSIEIE++ +D R+DTYRA Sbjct: 122 YAFGFLRTETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRA 181 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQH+N TDSAVRITHIPTG+VVQCQ +RSQH+N+A+A ML+++LYE EL+KR+ Sbjct: 182 SGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAE 241 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 A+ E+SKT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 242 ADKLEASKTDVGWGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDAFIQASLKQ 298 >gi|113971503|ref|YP_735296.1| peptide chain release factor 1 [Shewanella sp. MR-4] gi|114046304|ref|YP_736854.1| peptide chain release factor 1 [Shewanella sp. MR-7] gi|119361605|sp|Q0HFC8|RF1_SHESM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361606|sp|Q0HYK8|RF1_SHESR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|113886187|gb|ABI40239.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp. MR-4] gi|113887746|gb|ABI41797.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp. MR-7] Length = 363 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 111/346 (32%), Positives = 183/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R + D + + + L +E L+ ++ K Q L D E+ Sbjct: 9 LEGLLERNEEVLALLGDASVIADQERFRALSKEYSQLEEVVAGFKAYQQALADLESAKEM 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + ++ Q L D +A++E+ AGAGG E+ Sbjct: 69 LEEDDAEMREMAQEEIKAAKAELERLEAELQILLLPKDPNDDTNAFIEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE +++ E + ++GE G K + + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAEANRWQLEIMSSNEGEHGGFKEIIVKVSGEGAYGKLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V V ++ I I+ +D ++DT+R+SGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRVHTSAVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV+CQ +RSQHKN+AQA ++L A++ +E +KR + ++ + G Sbjct: 249 THIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEE--STRRSLVASGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 ++R+Y P V + R N+ ++V++GDLD + + + Sbjct: 307 ERVRTYNF-PQGRVSEHRINLTLYRLNEVMEGDLDAILGPLMQEHQ 351 >gi|261342293|ref|ZP_05970151.1| peptide chain release factor 2 [Enterobacter cancerogenus ATCC 35316] gi|288315634|gb|EFC54572.1| peptide chain release factor 2 [Enterobacter cancerogenus ATCC 35316] Length = 293 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 167/290 (57%), Positives = 206/290 (71%), Gaps = 1/290 (0%) Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ A Sbjct: 3 QGLEDVSGLLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDIQA 62 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AG+KS T+ I G AYGWL+ Sbjct: 63 GSGGTEAQDWASMLTRMYLRWAEARGFKTEIIEESEGEVAGLKSVTIKIIGDYAYGWLRT 122 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS RRHTSFSS +VYP V+D I+IEI+ +D RID YRASGAGGQHV Sbjct: 123 ETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVNDDIDIEINPADLRIDVYRASGAGGQHV 182 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K Sbjct: 183 NRTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNK 242 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 ++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 243 SDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291 >gi|254504878|ref|ZP_05117029.1| peptide chain release factor 1 [Labrenzia alexandrii DFL-11] gi|222440949|gb|EEE47628.1| peptide chain release factor 1 [Labrenzia alexandrii DFL-11] Length = 357 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 125/346 (36%), Positives = 188/346 (54%), Gaps = 18/346 (5%) Query: 16 WDNAVQRLSFLNTKTE-DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 DN + R + L +P + L RE L+ + I+ + D + Sbjct: 7 LDNLLDRFAELEHMMSANP----DPASYVKLSREYAGLEPLVLKIRALVKAEEDLKGAED 62 Query: 75 LALEEDDCSILQE-----TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L + ++E + + ++ + + L EAD+NDA LEV AG GG E Sbjct: 63 LIEDPATDPEMRELAELERDELSENVERLTQDVRIGLLPKDEADTNDAILEVRAGTGGDE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A L RMY R+AE R +K E L +GE G K + G N + LK E GVHR Sbjct: 123 AALFAGDLFRMYQRYAELRGWKVEILSASEGEVGGFKEVIASVSGENVFARLKFESGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS +++ V P ++++I++ +SD RIDT+RASGAGGQHVNTTDSA Sbjct: 183 VQRVPATESGGRIHTSAATVAVLP-QAENVDIDVQDSDLRIDTFRASGAGGQHVNTTDSA 241 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG+VV Q ERSQHKNKA+A +LRA++Y+ E ++ + E+ + ++G G Sbjct: 242 VRITHIPTGIVVAVQDERSQHKNKARAMQLLRARIYDEERER--AASERTEARRLQVGSG 299 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351 +IR+Y P V D R + ++ G+ LD+ ++A + Sbjct: 300 DRSERIRTYNF-PQGRVTDHRIGLTLYKLDQIIAGESLDEVIEALI 344 >gi|302536943|ref|ZP_07289285.1| peptide chain release factor 1 [Streptomyces sp. C] gi|302445838|gb|EFL17654.1| peptide chain release factor 1 [Streptomyces sp. C] Length = 359 Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats. Identities = 118/350 (33%), Positives = 178/350 (50%), Gaps = 16/350 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ ++ V + L K DP + + A+ L + L ++ + + D Sbjct: 1 MFEAVEDLVGEHADLEKKLADPSVHSDQANARKLNKRYAELTPIVATFRAWKQSAEDIET 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EL DD E + + + E + + +D D LE+ AGAGG ES Sbjct: 61 AKEL--AADDPDFAAEAKELSAQREELTEKLRLLLVPRDPSDDKDVLLEIKAGAGGDESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG----------PNAYGWL 181 +A LLRMY R+AE+ +KTE ++ + E G K + ++ + + Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVSVRTKGGNGATEPGQGVWARM 178 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHR+ R+ +S R HTS + + V P + +E+EI+ +D RID YR+SG GGQ Sbjct: 179 KYEGGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEVEVEINMNDLRIDVYRSSGPGGQ 237 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITHIPTGVV CQ E+SQ +NK QA +LR++L + E+ A+ Sbjct: 238 SVNTTDSAVRITHIPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEAAEQEASDQRR 297 Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 S+ + +IR+Y P + D RT + + VLDGDLD ++A Sbjct: 298 SQVRSVDRSEKIRTYNF-PENRISDHRTGFKAYNLDQVLDGDLDSVIQAC 346 >gi|329766951|ref|ZP_08258479.1| peptide chain release factor 1 [Gemella haemolysans M341] gi|328837676|gb|EGF87301.1| peptide chain release factor 1 [Gemella haemolysans M341] Length = 362 Score = 220 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 115/347 (33%), Positives = 188/347 (54%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R LN DP + + + +E++ ++ ++ +E +D + EL Sbjct: 7 LEIVEERYEKLNELLSDPDVVSDTKKLMEYSKEQRSIEKTVAVFREYKDIVQQIKDTKEL 66 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E+D + + + ++ ++ + + L D + +EV AGG E+Q Sbjct: 67 LEIEEDKEMKEMMQEEIKELEPTLAPMEEELKILLLPKDPNDGKNVVVEVRGAAGGDEAQ 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMYTR+AE + +K + LE + GIK +I G + Y +K E G HR+ Sbjct: 127 LFAGDLLRMYTRFAESQGWKVDVLERSETGIGGIKEVIFIISGEDVYSKMKFESGAHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S+ R HTS +++ V P + IEI+I+E+D R+DT+ +SGAGGQ VNTT SAVR Sbjct: 187 RVPTTESSGRIHTSTATVVVLP-EAEEIEIDINENDIRVDTFASSGAGGQSVNTTMSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTGVVV Q ERSQ KNK +A +LRA++Y+ ++EE A K+++G G Sbjct: 246 LTHIPTGVVVSMQDERSQIKNKEKAMKVLRARVYDKY--QQEEQAKFDAERKSKVGTGDR 303 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +++G LD+ ++A ++ Sbjct: 304 SERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEVLEALRIAEQ 349 >gi|255994191|ref|ZP_05427326.1| peptide chain release factor 2 [Eubacterium saphenum ATCC 49989] gi|255993859|gb|EEU03948.1| peptide chain release factor 2 [Eubacterium saphenum ATCC 49989] Length = 320 Score = 220 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 147/308 (47%), Positives = 207/308 (67%), Gaps = 1/308 (0%) Query: 42 AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI-KLEVE 100 AK+L++E+Q ++ +S E+ + D L + E ++ + ++ + + Sbjct: 3 AKILLKEKQEVEVVVSQYDELLLLIDDAKTLQAMVSEGLVEEDMEMLATDIFKKLEAGYH 62 Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 + +LL+G+ D +AY+ +H+G+GG+++QDW MLLRMYTRWAE + F+ + ++++ Sbjct: 63 KLKVTTLLAGKHDKANAYISIHSGSGGSDAQDWGKMLLRMYTRWAENKGFQIDVIDLNQN 122 Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220 AG KSATLLIKG NAYG+LK E+GVHRLVRISP+DS+SRRHTSF+S+ V P + Sbjct: 123 GVAGFKSATLLIKGLNAYGYLKKERGVHRLVRISPFDSSSRRHTSFASVDVIPEIKTDKV 182 Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 I+I + D RID +RASGAGGQHVN TDSAVRI H+PT +VV CQ ERSQH NK A +ML Sbjct: 183 IKIDDKDLRIDKFRASGAGGQHVNKTDSAVRIIHLPTKIVVTCQNERSQHMNKEAAMHML 242 Query: 281 RAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 +KL EL+ ++ +E N +I WG QIRSYV PY+MVKD RT E + V+D Sbjct: 243 ISKLMELKEKEHKESINDLTGDYNQITWGSQIRSYVFHPYRMVKDHRTGAEMGNVDAVMD 302 Query: 341 GDLDDFMK 348 GDLD F++ Sbjct: 303 GDLDYFIQ 310 >gi|282856730|ref|ZP_06265994.1| peptide chain release factor 2 [Pyramidobacter piscolens W5455] gi|282585426|gb|EFB90730.1| peptide chain release factor 2 [Pyramidobacter piscolens W5455] Length = 252 Score = 220 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 150/248 (60%), Positives = 183/248 (73%) Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167 LSG D A L VHAG+GG +SQDWA ML RMY RW E+R+FKT+ L+ EEAGIKS Sbjct: 5 LSGPYDHCSAILSVHAGSGGLDSQDWAEMLYRMYLRWCEERRFKTKLLDYQHDEEAGIKS 64 Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 ATLLI+G AYG+L+ E GVHRLVRISP+D+N RRHTSF+S+ V P + D +++EI+ D Sbjct: 65 ATLLIQGETAYGYLRSEIGVHRLVRISPFDTNKRRHTSFASVDVSPQLPDDVDVEIAPED 124 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 RIDTYR+SGAGGQHVN TDSAVRITH+PTG+VV CQ ERSQH NKA A ++L++KLY+ Sbjct: 125 LRIDTYRSSGAGGQHVNMTDSAVRITHLPTGIVVSCQNERSQHMNKATAMSVLKSKLYQR 184 Query: 288 ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 EL++R+ N K E WG QIRSYVLQPY +VKD RT E + VLDG LD F+ Sbjct: 185 ELEQRQAEMNALAGEKKESTWGSQIRSYVLQPYTLVKDHRTGEETGNVGGVLDGGLDPFI 244 Query: 348 KATLAIKK 355 A L + Sbjct: 245 LAYLRWAR 252 >gi|226324356|ref|ZP_03799874.1| hypothetical protein COPCOM_02137 [Coprococcus comes ATCC 27758] gi|225206804|gb|EEG89158.1| hypothetical protein COPCOM_02137 [Coprococcus comes ATCC 27758] Length = 313 Score = 220 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 149/309 (48%), Positives = 212/309 (68%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+E + + + + +++++ D L+EL EE+D +++E + + + E E + Sbjct: 1 MKELRKMQDCVKEVRDLESSYEDINALIELTEEEEDREMIKEIQREIAKFEKEFEDLRIR 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LLSGE DS +A + +HAGAGGT+S DWANML RMYTR+A+ + F+ L+ DG+ G+ Sbjct: 61 TLLSGEYDSCNAIVTLHAGAGGTDSCDWANMLYRMYTRYAQSKGFQITVLDYQDGDITGL 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K T + G NAYG+ + E+GVHRLVRISP++S +R TSF+S V P ++D I+IE+++ Sbjct: 121 KGITFEVTGDNAYGYFQSEKGVHRLVRISPFNSAGKRQTSFASCDVIPDIEDDIDIELND 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D RIDTYR+SGAGGQH+N T SAVRITH+PTG+VVQCQ ERSQ NK +A ML+AKLY Sbjct: 181 DDLRIDTYRSSGAGGQHINKTSSAVRITHLPTGIVVQCQNERSQLFNKDKAMQMLKAKLY 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 L+ Q++EE + +I +G QIRSY+L PY +VKD RT E + S VLDG+LD Sbjct: 241 LLKKQEQEEKVSGIRGEVQDINFGSQIRSYILHPYNLVKDHRTGEETGNVSAVLDGELDP 300 Query: 346 FMKATLAIK 354 F+ A L + Sbjct: 301 FINAYLKQR 309 >gi|62181551|ref|YP_217968.1| peptide chain release factor RF-2 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|205353965|ref|YP_002227766.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858304|ref|YP_002244955.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224584830|ref|YP_002638628.1| peptide chain release factor RF-2 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|62129184|gb|AAX66887.1| peptide chain release factor RF-2 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|205273746|emb|CAR38741.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206710107|emb|CAR34462.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224469357|gb|ACN47187.1| peptide chain release factor RF-2 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322716032|gb|EFZ07603.1| peptide chain release factor RF-2 [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|326629079|gb|EGE35422.1| peptide chain release factor RF-2 [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 293 Score = 220 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 170/290 (58%), Positives = 208/290 (71%), Gaps = 1/290 (0%) Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ A Sbjct: 3 QGLDDVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQA 62 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTE+QDWA+MLLRMY RWAE R FKTE +E +GE AGIKSAT+ I G AYGWL+ Sbjct: 63 GSGGTEAQDWASMLLRMYLRWAEARGFKTEIIEESEGEVAGIKSATIKISGEYAYGWLRT 122 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHV Sbjct: 123 ETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHV 182 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K Sbjct: 183 NRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTK 242 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 ++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 243 SDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291 >gi|52842546|ref|YP_096345.1| peptide chain release factor 1 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54295177|ref|YP_127592.1| peptide chain release factor 1 [Legionella pneumophila str. Lens] gi|54298226|ref|YP_124595.1| peptide chain release factor 1 [Legionella pneumophila str. Paris] gi|61214584|sp|Q5WUB1|RF1_LEGPL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|61214585|sp|Q5X2V3|RF1_LEGPA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|61214588|sp|Q5ZT29|RF1_LEGPH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|52629657|gb|AAU28398.1| peptide chain release factor 1 (RF-1) [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53752011|emb|CAH13437.1| peptide chain release factor 1 [Legionella pneumophila str. Paris] gi|53755009|emb|CAH16497.1| peptide chain release factor 1 [Legionella pneumophila str. Lens] gi|307611181|emb|CBX00825.1| peptide chain release factor 1 [Legionella pneumophila 130b] Length = 362 Score = 220 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 114/343 (33%), Positives = 175/343 (51%), Gaps = 9/343 (2%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 ++R + + + + + K L +E L+ + + + L Sbjct: 7 LKLQQMLERYEEVGRLLSEASIIADQNQFKSLSKEYAQLEPVSQCYESYLEAKNNLDSLN 66 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESL---LSGEADSNDAYLEVHAGAGGTES 130 EL +D + K E + D + YLEV AG GG E+ Sbjct: 67 ELLESDDKDLATMAEEEIDTVKKQIEELDEQLQWHLIPKDPDDERNIYLEVRAGTGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY+R+AE + ++ E + GE G K I G Y LK E G HR+ Sbjct: 127 AIFAGDLFRMYSRYAESQGWQIELISASHGEHGGYKEIIAKISGQAVYSQLKFESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS ++ + P VD+ +I+I+ D RIDTYR+SGAGGQHVN TDSA+ Sbjct: 187 QRVPETESQGRVHTSACTVAIMPEVDEINDIQINPDDLRIDTYRSSGAGGQHVNKTDSAI 246 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTGVVV+CQ ERSQHKN+A+A ++L+ +L + E+ K+++ ++ K+ +G G Sbjct: 247 RITHIPTGVVVECQDERSQHKNRAKAMSLLKTRLLDAEVSKQKQEQ--AQTRKSLVGTGD 304 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P + D R N+ SD+++G+L + Sbjct: 305 RSERIRTYNF-PQGRLTDHRINLTIYQLSDIMEGNLSLVIDPL 346 >gi|301060315|ref|ZP_07201178.1| peptide chain release factor 1 [delta proteobacterium NaphS2] gi|300445511|gb|EFK09413.1| peptide chain release factor 1 [delta proteobacterium NaphS2] Length = 358 Score = 220 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 123/350 (35%), Positives = 184/350 (52%), Gaps = 11/350 (3%) Query: 13 LFDW-DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68 +FD +R L T P + Q+ + +E L I+ ++E +QD + + Sbjct: 3 MFDKMKETEERYRELETFLGQPEIIQDQKRFQKYAKEHSDLTPIITVLREHQALQDEIAE 62 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 + LL+ E +E R++ + L D + LE+ AG GG Sbjct: 63 SQSLLQDPDPEIKKLAKEEIEGLNDRLERTADELTVLLLPKDPNDEKNILLEIRAGTGGE 122 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMY+R+AE R++KTE L + G K +LI+G + LK E GVH Sbjct: 123 EAALFAADLFRMYSRYAELRRWKTEILSQNMTGIGGFKEVIVLIEGHRVFSRLKYESGVH 182 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ ++ R HTS ++ V P + +++EI D RID YR+SG GGQHVNTTDS Sbjct: 183 RVQRVPETEAQGRIHTSAVTVAVLP-EAEEVDVEIKPEDLRIDVYRSSGHGGQHVNTTDS 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PTG+VV CQ E+SQHKNKA+A +LR+++ +LE + + I E KT +G Sbjct: 242 AVRITHLPTGLVVTCQDEKSQHKNKAKAMKVLRSRMLDLETAHQ--HSRISEERKTMVGT 299 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + D L GDL+ ++ + + Sbjct: 300 GDRSERIRTYNF-PQGRVTDHRIGLTLYKLDDFLQGDLNLIIEPLITYFQ 348 >gi|241890031|ref|ZP_04777329.1| peptide chain release factor 1 [Gemella haemolysans ATCC 10379] gi|241863653|gb|EER68037.1| peptide chain release factor 1 [Gemella haemolysans ATCC 10379] Length = 362 Score = 220 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 116/347 (33%), Positives = 189/347 (54%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R LN DP + + + +E++ ++ ++ +E +D + EL Sbjct: 7 LEIVEERYEKLNELLSDPDVVSDTKKLMEYSKEQRSIEKTVAVFREYKDIVQQIKDTKEL 66 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E+D + + + ++ ++ + + L D + +EV AGG E+Q Sbjct: 67 LEIEEDKEMKEMMQEEIKELEPTLAPMEEELKILLLPKDPNDGKNVVVEVRGAAGGDEAQ 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMYTR+AE + +K + LE + GIK A +I G + Y +K E G HR+ Sbjct: 127 LFAGDLLRMYTRFAESQGWKVDVLERSETGIGGIKEAIFIISGEDVYSKMKFESGAHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S+ R HTS +++ V P + IEI+I+E+D R+DT+ +SGAGGQ VNTT SAVR Sbjct: 187 RVPTTESSGRIHTSTATVVVLP-EAEEIEIDINENDIRVDTFASSGAGGQSVNTTMSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTGVVV Q ERSQ KNK +A +LRA++Y+ ++EE A K+++G G Sbjct: 246 LTHIPTGVVVSMQDERSQIKNKEKAMKVLRARVYDKY--QQEEQAKFDAERKSKVGTGDR 303 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +++G LD+ ++A ++ Sbjct: 304 SERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEVLEALRIAEQ 349 >gi|167622749|ref|YP_001673043.1| peptide chain release factor 2 [Shewanella halifaxensis HAW-EB4] gi|167352771|gb|ABZ75384.1| peptide chain release factor 2 [Shewanella halifaxensis HAW-EB4] Length = 293 Score = 220 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 156/291 (53%), Positives = 207/291 (71%), Gaps = 1/291 (0%) Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L D LLELA+EEDD + + LQ ++ +E +F + SG D++D YL++ Sbjct: 1 MDSGLEDIEGLLELAVEEDDEETFNDAAAELQDLERRLEELEFRRMFSGPHDASDCYLDI 60 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +G+GGTE+QDWANM+LRM+ RW + +K E +E+ G+ AGIK AT+ G A+G L Sbjct: 61 QSGSGGTEAQDWANMVLRMFLRWGDAHDYKPELIEVTGGDVAGIKGATIKFTGEYAFGSL 120 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQ Sbjct: 121 RTETGVHRLVRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQ 180 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SA+RITH+PT VVQCQ +RSQHKN+ A L+AKLYELE+ K+ E Sbjct: 181 HVNKTESAIRITHLPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNADKQAAED 240 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 241 AKSDIGWGSQIRSYVLDD-ARIKDLRTGVENRNTQSVLDGDLDKFIEASLK 290 >gi|78358024|ref|YP_389473.1| peptide chain release factor 1 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|119361534|sp|Q30X18|RF1_DESDG RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|78220429|gb|ABB39778.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 357 Score = 220 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 102/350 (29%), Positives = 168/350 (48%), Gaps = 11/350 (3%) Query: 13 LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN-- 69 +F ++ ++ L + P ++ + + L + L + + + + Sbjct: 1 MFAKLEHLERQFEDLEQQLSSPEVFGDQERYRKLTKAHSDLKEIVEVFRVYRQLNEELAG 60 Query: 70 -LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 +L + E +E +R+ + L D + LE+ AG GG Sbjct: 61 NKEMLRDSDPEIQAMAREEIDAIEKRLPEMEHELKLLLLPKDPLDEKNVVLEIRAGTGGE 120 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMY R+AE ++ E L + + G K LI G Y +K E G H Sbjct: 121 EAALFAADLFRMYLRYAEDMGWRVEVLSSSETDSGGFKEIIGLISGDKVYSRMKFESGTH 180 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ ++ R HTS +++ V P D +E+++ D R D YR+SG GGQ VNTTDS Sbjct: 181 RVQRVPATETQGRIHTSAATVAVMP-EADEVELDMKPEDLRFDVYRSSGPGGQSVNTTDS 239 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+THIPTG+ V CQ E+SQHKNKA+ +L ++L + + KR E + E ++ +G Sbjct: 240 AVRVTHIPTGITVACQDEKSQHKNKAKGLKILASRLLQAQEDKRHEE--LAEQRRSLVGT 297 Query: 309 GR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P + D R N+ ++G + D + A + + Sbjct: 298 GDRSGRIRTYNF-PQGRITDHRINLTLYKLDAFMEGQIGDMLDALITHAQ 346 >gi|254382315|ref|ZP_04997675.1| peptide chain release factor 1 [Streptomyces sp. Mg1] gi|194341220|gb|EDX22186.1| peptide chain release factor 1 [Streptomyces sp. Mg1] Length = 359 Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 118/350 (33%), Positives = 176/350 (50%), Gaps = 16/350 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + + + L K DP + + A+ L + L ++ + + D Sbjct: 1 MFEAVEELIGEHADLEKKLADPSVHSDQANARKLNKRYAELTPIVATFRAWKQSAEDIET 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E DD E + + + E + + +D D LEV AGAGG ES Sbjct: 61 AKEF--AADDPDFAAEVKELSAQREELTEKLRLLLVPRDPSDDKDVLLEVKAGAGGDESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG----------PNAYGWL 181 +A LLRMY R+AE+ +KTE ++ + E G K + ++ + L Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVSVRTKGGNGATEPGQGVWARL 178 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHR+ R+ +S R HTS + + V P + +E+EI+ +D RID YR+SG GGQ Sbjct: 179 KYEGGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEVEVEINMNDLRIDVYRSSGPGGQ 237 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITHIPTGVV CQ E+SQ +NK QA +LR++L + E+ A+ Sbjct: 238 SVNTTDSAVRITHIPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEAAEQEASDVRR 297 Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 S+ + +IR+Y P + D RT + + VLDGDLD ++A Sbjct: 298 SQVRSVDRSEKIRTYNY-PENRISDHRTGFKAYNLDQVLDGDLDSIIQAC 346 >gi|56965632|ref|YP_177366.1| peptide chain release factor 1 [Bacillus clausii KSM-K16] gi|61214582|sp|Q5WB55|RF1_BACSK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|56911878|dbj|BAD66405.1| peptide chain release factor 1 [Bacillus clausii KSM-K16] Length = 356 Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 110/347 (31%), Positives = 173/347 (49%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R +LN + DP++ N + + +E+ ++ + ++ + + Sbjct: 5 LQAVEDRYEYLNEQLSDPNVISNATKLREYSKEQAQIEETVQTYRQYKQVTEQLADAKAM 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E+ D + Q + L + + L D + +E+ AGG E+Q Sbjct: 65 LEEKLDDDMYQMVKEELDELSERKAELEERLKILLLPKDPNDDKNVIVEIRGAAGGDEAQ 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L +MY R+AE + +KTE +E H E G K ++ G AY LK E G HR+ Sbjct: 125 LFAADLYKMYHRYAEMQGWKTEVIEAHATELGGYKEIIFMVNGSGAYSKLKYENGAHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + +EI+I E D R+DT+ +SG GGQ VNTT SAVR Sbjct: 185 RVPQTESGGRIHTSTATVAVLP-EAEEVEIDIHEKDIRVDTFASSGPGGQSVNTTMSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PT VV CQ E+SQ KNK +A +LRA++++ ++E A ES K +G G Sbjct: 244 LTHLPTNTVVSCQDEKSQIKNKEKAMKVLRARIFDKV--QQEAQAEYAESRKLAVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + VL G LD+ + A + + Sbjct: 302 SERIRTYNF-PQSRVTDHRIGLTLQKLEQVLQGKLDEIIDALVVADQ 347 >gi|116748170|ref|YP_844857.1| peptide chain release factor 2 [Syntrophobacter fumaroxidans MPOB] gi|116697234|gb|ABK16422.1| bacterial peptide chain release factor 2 (bRF-2) [Syntrophobacter fumaroxidans MPOB] Length = 312 Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 156/298 (52%), Positives = 216/298 (72%) Query: 55 AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114 + + + + L DN ++LE+ALEE+D +L++ ++ E+ + + LL E D Sbjct: 2 IVENWQRLSEELRDNELMLEMALEEEDREVLKDVHRKALSLQKELRTVELQQLLGEENDD 61 Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 +A + ++AGAGGTE+QDWA MLLRMY RW EK+ F + +++ +GEEAGIKS T + G Sbjct: 62 KNAIVSINAGAGGTEAQDWAEMLLRMYLRWCEKKSFTVQMVDMLEGEEAGIKSGTFTVSG 121 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 +AYG LKGE G+HRLVRISP+D++ RRHTSF+++ V P VD+ IE+EI ++D RIDTYR Sbjct: 122 SHAYGLLKGESGIHRLVRISPFDASGRRHTSFAAVLVIPEVDEKIEVEIKQADLRIDTYR 181 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 ASGAGGQHVN T SAVRITH+PTG+VVQCQ E+SQH+N+ A +LRA+LYE E + ++E Sbjct: 182 ASGAGGQHVNKTSSAVRITHLPTGIVVQCQNEKSQHRNRDIALKILRARLYEREKRAQQE 241 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 S +I WG QIRSYVLQPY+++KD RT+IEK + VLDG++DDF++ L Sbjct: 242 KLQEAHDSLDDIAWGNQIRSYVLQPYRLIKDHRTSIEKGNVEGVLDGEIDDFIEGYLM 299 >gi|297623932|ref|YP_003705366.1| hypothetical protein Trad_1705 [Truepera radiovictrix DSM 17093] gi|297165112|gb|ADI14823.1| conserved hypothetical protein [Truepera radiovictrix DSM 17093] Length = 377 Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 144/358 (40%), Positives = 203/358 (56%), Gaps = 9/358 (2%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +++ QL+ L G D RL+ L + DP LW + A+ L +E L + Sbjct: 14 EMTAQLHALRGYLDLARKEARLAELEPQLSDPKLWDDPEAARTLTQEAARLRRVLETFHR 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L L ELA ++ ++ ++ E+L SG D A L + Sbjct: 74 LEGDLEGLRELQELATTPEEQQD---LEAERAALQRTLDALYRETLFSGPHDDRAAILTI 130 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA--GIKSATLLIKGPNAYG 179 GAGGTES DWA ML RMY R+AE++ F+ E L+ + A GI A L+I+G AYG Sbjct: 131 KPGAGGTESSDWAGMLWRMYRRFAERQGFEVELLDATPSDAAPNGIDYAQLIIRGERAYG 190 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 L+ E GVHRLVR+SP+D+ RRHTSF+S+ V P +DD++EI I D R+D YR+SG G Sbjct: 191 LLQVESGVHRLVRVSPFDAQGRRHTSFASVEVMPEIDDAVEITIDPKDVRVDVYRSSGPG 250 Query: 240 GQHVNTTDSAVRITHI---PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 GQ VNTTDSAVR+ + P +VV CQ +SQ KN+ +A +LR++L+E E ++R E Sbjct: 251 GQSVNTTDSAVRVVYKGGTPEEIVVTCQDGKSQIKNREKAMTVLRSRLFEREERRRLEEQ 310 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + I WG QIRSYVL + VKD RT + P DVLDGD++ + + L + Sbjct: 311 MRARGEQKAIEWGSQIRSYVLDK-RYVKDHRTGEMRHDPDDVLDGDIEGLIWSGLEHR 367 >gi|148359876|ref|YP_001251083.1| peptide chain release factor 1 [Legionella pneumophila str. Corby] gi|296107926|ref|YP_003619627.1| peptide chain release factor [Legionella pneumophila 2300/99 Alcoy] gi|166223567|sp|A5IED7|RF1_LEGPC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|148281649|gb|ABQ55737.1| peptide chain release factor 1 (RF-1) [Legionella pneumophila str. Corby] gi|295649828|gb|ADG25675.1| peptide chain release factor [Legionella pneumophila 2300/99 Alcoy] Length = 362 Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 114/343 (33%), Positives = 175/343 (51%), Gaps = 9/343 (2%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 ++R + + + + + K L +E L+ + + + L Sbjct: 7 LKLQQMLERYEEVGRLLSEASIIADQNQFKSLSKEYAQLEPVSQCYESYLEAKNNLDSLN 66 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESL---LSGEADSNDAYLEVHAGAGGTES 130 EL +D + K E + D + YLEV AG GG E+ Sbjct: 67 ELLESDDKDLATMAEEEIDIVKKQIEELDEQLQWHLIPKDPDDERNIYLEVRAGTGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY+R+AE + ++ E + GE G K I G Y LK E G HR+ Sbjct: 127 AIFAGDLFRMYSRYAESQGWQIELISASHGEHGGYKEIIAKISGQAVYSQLKFESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS ++ + P VD+ +I+I+ D RIDTYR+SGAGGQHVN TDSA+ Sbjct: 187 QRVPETESQGRVHTSACTVAIMPEVDEINDIQINPDDLRIDTYRSSGAGGQHVNKTDSAI 246 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTGVVV+CQ ERSQHKN+A+A ++L+ +L + E+ K+++ ++ K+ +G G Sbjct: 247 RITHIPTGVVVECQDERSQHKNRAKAMSLLKTRLLDAEVSKQKQEQ--AQTRKSLVGTGD 304 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P + D R N+ SD+++G+L + Sbjct: 305 RSERIRTYNF-PQGRLTDHRINLTIYQLSDIMEGNLSLVIDPL 346 >gi|222034586|emb|CAP77328.1| Peptide chain release factor 2 [Escherichia coli LF82] Length = 293 Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 169/292 (57%), Positives = 208/292 (71%), Gaps = 1/292 (0%) Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 1 MKQGLEDVSGLLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDI 60 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL Sbjct: 61 QAGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWL 120 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQ Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQ 180 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E Sbjct: 181 HVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMED 240 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 241 NKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291 >gi|90961566|ref|YP_535482.1| peptide chain release factor 1 [Lactobacillus salivarius UCC118] gi|119361553|sp|Q1WUD6|RF1_LACS1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|90820760|gb|ABD99399.1| Bacterial Peptide Chain Release Factor 1 [Lactobacillus salivarius UCC118] Length = 360 Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 106/352 (30%), Positives = 182/352 (51%), Gaps = 12/352 (3%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLC 67 LFD R L DP + + L +E L + + + ++ Sbjct: 3 KLFDRLQMLEDRYEELGELLSDPDVISDTKRFTKLSKEMADLRETVEKYNKYKEVTQQIS 62 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D+ +L L+++ S+++E N + K E + L D + +E+ AG Sbjct: 63 DDEEMLSDGLDDEMASLVKEELSNAKNEKVKLEEEIKILLLPKDPNDDKNIIMEIRGAAG 122 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L MY+++AE++ + E ++ + E G K L+I G + + LK E G Sbjct: 123 GDEASLFAADLFSMYSKYAERQGWSIEVIDKNVTEVGGFKEIALIINGNSVWSKLKYESG 182 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ RI +S R HTS +++ V P ++ +EIE+ D R+D YR+SGAGGQH+N T Sbjct: 183 AHRVQRIPVTESAGRVHTSTATVVVMP-EEEDVEIELDPKDIRVDVYRSSGAGGQHINKT 241 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+TH+PTG+VV Q +RSQ +N+ +A +L+A++Y+ Q+ E + + K+ + Sbjct: 242 SSAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDYYAQQ--EQSEYDANRKSAV 299 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R + +++G+L+D + A + ++ Sbjct: 300 GTGDRSERIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELEDVIDALVLFEQ 350 >gi|333000723|gb|EGK20298.1| peptide chain release factor 2 [Shigella flexneri K-272] gi|333015221|gb|EGK34563.1| peptide chain release factor 2 [Shigella flexneri K-227] Length = 293 Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 169/292 (57%), Positives = 208/292 (71%), Gaps = 1/292 (0%) Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 1 MKQGLEDVSGLLELAVEADDEETFNEAVAELNALEEKLAQLEFRRMFSGEYDSADCYLDI 60 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL Sbjct: 61 QAGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWL 120 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQ Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQ 180 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E Sbjct: 181 HVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMED 240 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 241 NKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291 >gi|116493078|ref|YP_804813.1| peptide chain release factor 1 [Pediococcus pentosaceus ATCC 25745] gi|116103228|gb|ABJ68371.1| bacterial peptide chain release factor 1 (bRF-1) [Pediococcus pentosaceus ATCC 25745] Length = 359 Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats. Identities = 108/347 (31%), Positives = 175/347 (50%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---DNLIL 72 R L+ DP + + + L +E + + +E + + +N L Sbjct: 7 VQAVADRYEELSELLADPEVLGDSQRYQELSKEEGEIRETVEKYREYRKTVDAIAENEEL 66 Query: 73 LELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L+ + S+++ L+ K E + L + D + +E+H AGG E+ Sbjct: 67 QREKLDPEMDSLVKAELAELRETKATLEEEIKILMLPTDPNDDKNIIMEIHGAAGGDEAS 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MYTR+AE + +K E ++ + + G K L+I G Y LK E G HR+ Sbjct: 127 LFAADLYNMYTRYAETQGWKVEVVDENATDVGGFKEIVLMISGNKVYSKLKYENGAHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS S++ V P + ++IEI + D R D YR+SGAGGQH+N T SAVR Sbjct: 187 RVPVTESAGRVHTSTSTVGVMP-EAEDVDIEIDQKDIRTDVYRSSGAGGQHINKTSSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q ERSQ +N+ +A +L+A++Y+ + +E K+ +G G Sbjct: 246 MTHLPTGIVVAMQDERSQQQNREKAMRILKARVYDYY--QTQEEDAYNAERKSAVGTGDR 303 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + V++G+LDD + A + + Sbjct: 304 SERIRTYNF-PQNRVTDHRIGLTLNKLDRVMNGELDDIIDALILDDQ 349 >gi|300214391|gb|ADJ78807.1| Peptide chain release factor 1 (RF-1) [Lactobacillus salivarius CECT 5713] Length = 360 Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats. Identities = 106/352 (30%), Positives = 183/352 (51%), Gaps = 12/352 (3%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLC 67 LFD R L DP + + L +E L + + + ++ Sbjct: 3 KLFDRLQMLEDRYEELGELLSDPDVISDTKRFTKLSKEMADLRETVEKYNKYKEVTQQIS 62 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D+ +L L+++ S+++E N++ K E + L D + +E+ AG Sbjct: 63 DDEEMLSDGLDDEMASLVKEELSNVKDEKVKLEEEIKILLLPKDPNDDKNIIMEIRGAAG 122 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L MY+++AE++ + E ++ + E G K L+I G + + LK E G Sbjct: 123 GDEASLFAADLFSMYSKYAERQGWSIEVIDKNVTEVGGFKEIALIINGNSVWSKLKYESG 182 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ RI +S R HTS +++ V P ++ +EIE+ D R+D YR+SGAGGQH+N T Sbjct: 183 AHRVQRIPVTESAGRVHTSTATVVVMP-EEEDVEIELDPKDIRVDVYRSSGAGGQHINKT 241 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+TH+PTG+VV Q +RSQ +N+ +A +L+A++Y+ Q+ E + + K+ + Sbjct: 242 SSAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDYYAQQ--EQSEYDANRKSAV 299 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R + +++G+L+D + A + ++ Sbjct: 300 GTGDRSERIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELEDVIDALVLFEQ 350 >gi|268610024|ref|ZP_06143751.1| peptide chain release factor 1 [Ruminococcus flavefaciens FD-1] Length = 357 Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats. Identities = 114/352 (32%), Positives = 184/352 (52%), Gaps = 13/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + + ++ K P + + LM+E +++ I +E + N Sbjct: 1 MFEKLAAMETKYNEISDKLSQPDIVSDNKLYTQLMKEYKNMTPIIEKYREYKSAQAQNEE 60 Query: 72 LLELALEEDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 EL +E ++ + ++ + + L D + +E+ GAG Sbjct: 61 AKELLDGGGLDRDFKEMVQAELEESKEAMENVTQELKILLLPKDPNDDKNVIIEIRGGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +AN L RMYT +AE R +K E L + E G K + I+G AY LK E G Sbjct: 121 GEEASLFANSLYRMYTMYAEARGWKQEVLSANPTELGGFKEISFSIEGEGAYSRLKYESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S R HTS ++ V V D +E+EI+ +D +ID +RASGAGGQH+N T Sbjct: 181 VHRVQRVPETESQGRIHTSTVTVAVL-VEADDVELEINPTDLKIDYFRASGAGGQHINKT 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SAVRIT++PT VVV+CQ ERSQHKNK +A +LR+++YE Q++ + I ++++ Sbjct: 240 ESAVRITYLPTNVVVECQDERSQHKNKDKAMKILRSRIYEAMQQEQND--KIASERRSQV 297 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P + D R + D+L+G+LD+ + + Sbjct: 298 GTGDRSERIRTYNY-PQGRLTDHRIGLTIYRLEDILNGNLDEVFDSLATADQ 348 >gi|303247215|ref|ZP_07333489.1| peptide chain release factor 2 [Desulfovibrio fructosovorans JJ] gi|302491374|gb|EFL51262.1| peptide chain release factor 2 [Desulfovibrio fructosovorans JJ] Length = 307 Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats. Identities = 144/300 (48%), Positives = 199/300 (66%), Gaps = 1/300 (0%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 L + I +++ D L LA ++ +L ++ + + E+ + + E Sbjct: 2 LTSRIEDGEKLLAARTDLDEWLSLAKDDGSPEVLDALAEQIATLDGELADAELAAFFRSE 61 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 + DA LE+H GAGGTE+QDWA MLLRMY RWAE+++F + L+ G+EAG+KS TL Sbjct: 62 DNV-DAILEIHPGAGGTEAQDWAEMLLRMYRRWAERKEFGVKILDYLPGDEAGLKSVTLQ 120 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 GP AYG L E+G+HRL+RISP+DS+ RRHTSF+S+ VYP I+I+I E D RID Sbjct: 121 FSGPYAYGMLAAEKGIHRLIRISPFDSSGRRHTSFASVDVYPDAGVDIDIDIKEDDLRID 180 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 +RASG GGQHVN T SA+RITH+PTG+VVQCQ E+SQH+N+ A +L+A+LY+LEL+K Sbjct: 181 VFRASGPGGQHVNKTSSAIRITHLPTGIVVQCQNEKSQHRNRETAMKVLKARLYDLELKK 240 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + SK IG+G QIR+Y +QPY++VKD RT ++ VLDGDLD F++ L Sbjct: 241 LQAEKQESYESKNAIGFGSQIRTYTMQPYRLVKDHRTGVDAGDVEAVLDGDLDKFIRGYL 300 >gi|229917064|ref|YP_002885710.1| peptide chain release factor 1 [Exiguobacterium sp. AT1b] gi|259585222|sp|C4KYV2|RF1_EXISA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|229468493|gb|ACQ70265.1| peptide chain release factor 1 [Exiguobacterium sp. AT1b] Length = 356 Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats. Identities = 109/352 (30%), Positives = 176/352 (50%), Gaps = 13/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD R LN DP + + + + +E+ L+ + ++ ++ Sbjct: 1 MFDRLSVLEDRYMQLNEMLADPEVLSDSTKLRQYSKEQAQLEETVQMYRQYKETSQAFKE 60 Query: 72 LLELALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 + + + ++E + +K + L D + +EV AG Sbjct: 61 AKSMLEDRTLDAEMRELAKEEMNLLEPEVKELEAKLRILLLPKDPNDEKNVIVEVRGAAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L +MYTR+AE++ +K E ++ + E G K T +I G AY LK E G Sbjct: 121 GDEAALFAGDLYKMYTRFAERQNWKVELIDANYTELGGFKEVTFMINGAGAYSKLKFENG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P + +E+ I D R+DT+ +SG GGQ VNTT Sbjct: 181 AHRVQRVPSTESGGRIHTSTATVAVLP-EAEDVEVHIDMKDVRVDTFTSSGPGGQSVNTT 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+THIP+G+VV CQ E+SQHKNK +A +LRA+LY+ + E + K+ + Sbjct: 240 QSAVRLTHIPSGLVVSCQDEKSQHKNKDKAMKVLRARLYDKMQSEHMEE--LSAQRKSAV 297 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R + VL G+L+D + A + ++ Sbjct: 298 GTGDRSERIRTYNF-PQSRVTDHRIGLTLQKLDRVLAGELEDIIDALIMDEQ 348 >gi|238792836|ref|ZP_04636467.1| Peptide chain release factor 2 [Yersinia intermedia ATCC 29909] gi|238727944|gb|EEQ19467.1| Peptide chain release factor 2 [Yersinia intermedia ATCC 29909] Length = 289 Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats. Identities = 165/288 (57%), Positives = 207/288 (71%), Gaps = 1/288 (0%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 + D LLELA+E DD E L + ++ +F + SGE DS + YL++ AG+ Sbjct: 1 MEDVSGLLELAIEADDEETFNEAIAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQAGS 60 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDWA+MLLRMY RWAE + FKTE +E DG+ AG+KSAT+ I G A+GWL+ E Sbjct: 61 GGTEAQDWASMLLRMYLRWAESKGFKTEIIEESDGDVAGLKSATIKIIGDYAFGWLRTET 120 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN Sbjct: 121 GVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNK 180 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T+SAVRITH+PT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ + E +K++ Sbjct: 181 TESAVRITHLPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDNKSD 240 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 241 IGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 287 >gi|301384023|ref|ZP_07232441.1| peptide chain release factor 2, programmed frameshift [Pseudomonas syringae pv. tomato Max13] gi|302058729|ref|ZP_07250270.1| peptide chain release factor 2, programmed frameshift [Pseudomonas syringae pv. tomato K40] gi|331016328|gb|EGH96384.1| peptide chain release factor 2, programmed frameshift [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 304 Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats. Identities = 166/302 (54%), Positives = 220/302 (72%), Gaps = 1/302 (0%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 L + + E+ L D LL ++ EE+D + + + + ++R++ +E +F + SGE Sbjct: 2 LAQIVETLDEMSSGLVDAKDLLLMSAEEEDQAAVDDVAAEVERLRASLEKLEFRRMFSGE 61 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F +E+ GE AGIK AT+ Sbjct: 62 MDPNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVH 121 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 IKG A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ SD RID Sbjct: 122 IKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRID 181 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 TYR+SGAGGQHVNTTDSAVRITH+PT VV CQ ERSQH NK A MLRA+LYE E+QK Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQK 241 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R + E +K++IGWG QIRSYVL +KDLRTNIE++ VLDGD+D+++ A+L Sbjct: 242 RNAASQALEDTKSDIGWGHQIRSYVLD-ASRIKDLRTNIERSDCDKVLDGDIDEYLIASL 300 Query: 352 AI 353 Sbjct: 301 KQ 302 >gi|86132182|ref|ZP_01050777.1| peptide chain release factor 2 [Dokdonia donghaensis MED134] gi|85817101|gb|EAQ38284.1| peptide chain release factor 2 [Dokdonia donghaensis MED134] Length = 316 Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats. Identities = 146/308 (47%), Positives = 208/308 (67%), Gaps = 2/308 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ + ++ +E Q + D +L E A E + + +E +F Sbjct: 1 MKTLRSKKKWVTDYEEAQTFVEDLEVLYEFAKEGEAPEENVQARYEKAA--SFIEDIEFR 58 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++LS E D L++ AGAGGTES DWA+ML+RMY +AEK+ +K + L +G+ AGI Sbjct: 59 NMLSEEGDELSCVLQITAGAGGTESCDWASMLMRMYLMYAEKQGWKVKELNFQEGDVAGI 118 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ +L I+G A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDSIEIE++ Sbjct: 119 KTVSLEIEGEFAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIELNP 178 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D I T R+SGAGGQ+VN ++ V++TH PTG+ + C RSQH N+A+A MLR++LY Sbjct: 179 ADYDIVTARSSGAGGQNVNKVETKVQLTHHPTGIQISCSDSRSQHDNRAKALQMLRSQLY 238 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 ELEL+K+ E N E+ K I WG QIR+YVL PY++VKD+RT +E + VLDG++D Sbjct: 239 ELELRKQMEARNAIEADKKAIEWGSQIRNYVLHPYKLVKDVRTAVETGNTDAVLDGNIDL 298 Query: 346 FMKATLAI 353 F+K L + Sbjct: 299 FLKGYLMM 306 >gi|225848358|ref|YP_002728521.1| peptide chain release factor 1 [Sulfurihydrogenibium azorense Az-Fu1] gi|225644346|gb|ACN99396.1| peptide chain release factor 1 [Sulfurihydrogenibium azorense Az-Fu1] Length = 360 Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats. Identities = 123/352 (34%), Positives = 186/352 (52%), Gaps = 12/352 (3%) Query: 11 GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 + D N +++ L DP + ++ + + + +E + L +S + + Sbjct: 3 KKILDQIKNIEEKVKKLEQLLTDPEVLKDPSKIQSIAKEHKDLSEILSLYNQYEKVNFQI 62 Query: 70 LILLELA----LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 + +L ++ E + Q + + + L D + LE+ G Sbjct: 63 EEVKQLINSTTEDDLRELAELELEELKQELSELEKKIELAFLPKDPNDEKNVILEIRQGT 122 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A L RMY R+AE+ +KTE L IH + G+K LIKG AY LK E Sbjct: 123 GGEEAALFAAELFRMYQRYAERHGWKTEVLSIHPTDRGGVKEVIALIKGKGAYSRLKYES 182 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ +S+ R HTS +++ V P + ++IEI D +I+T RA GAGGQHVNT Sbjct: 183 GVHRVQRVPETESSGRIHTSTATVAVLP-EAEEVDIEIKPEDLKIETMRAGGAGGQHVNT 241 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITH+PTG+VVQCQ ERSQ +NK +A +LRA+L + R E I + K + Sbjct: 242 TDSAVRITHLPTGIVVQCQDERSQLQNKLKAMQILRARLKDYYD--RLEREKIAKERKEQ 299 Query: 306 IGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +G G + IR+Y P V D R N +D+LDGDLD+ ++ +A + Sbjct: 300 VGTGERSEKIRTYNF-PQNRVTDHRVNYTSYRINDILDGDLDEIIEVLIAKE 350 >gi|239817175|ref|YP_002946085.1| peptide chain release factor 1 [Variovorax paradoxus S110] gi|259585259|sp|C5CXW3|RF1_VARPS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|239803752|gb|ACS20819.1| peptide chain release factor 1 [Variovorax paradoxus S110] Length = 362 Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats. Identities = 116/343 (33%), Positives = 178/343 (51%), Gaps = 7/343 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + QRL L+ + ++ + + + RE + + + R D E+ Sbjct: 9 LERYAQRLGELDFLLSREDIMSDMAQYRTISREHAEITQIAGRYERYKQREADIAGAAEM 68 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + +E Q E Q L D+ +A+LE+ AG GG ES +A Sbjct: 69 LEDPDMAEMAREEIAAAQAELVQLEEELQRLLLPKDPDDARNAFLEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+ E+ ++ E + + E G K + I G + +G L+ E G HR+ R+ Sbjct: 129 GDLLRMYTRYCERAGWRCEVVSESESELGGYKEVVIRIAGNDVFGRLRFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V D+++ ++I+ +D RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 189 ATETQGRIHTSACTVAVLAEPDETVAVQINPADLRIDTYRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+V +CQ +RSQH+NKA+A +L A++ E + E A K IG G + Sbjct: 249 IPTGIVAECQDDRSQHRNKAKALQVLSARI--QEKDRSERAAKDAAMRKGLIGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P + D R N+ +++GDL D + A A + Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYKLQAIMEGDLGDVLDALRAAR 348 >gi|312884085|ref|ZP_07743798.1| peptide chain release factor 1 [Vibrio caribbenthicus ATCC BAA-2122] gi|309368255|gb|EFP95794.1| peptide chain release factor 1 [Vibrio caribbenthicus ATCC BAA-2122] Length = 362 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 112/346 (32%), Positives = 181/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R + DP + + + + L +E L+ + Q D E+ Sbjct: 9 LETLVERYEEVQHLLGDPEIIGDQDKFRSLSKEYSQLEEVTKCFQAFQQAQEDLTAAEEM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYLEVHAGAGGTESQD 132 A EED+ + Q + + L D + +LE+ AGAGG E+ Sbjct: 69 AKEEDEEMREMAQEEIAQSKQAIENLSEELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AEK+ ++ E + ++ E G K + G AYG +K E G HR+ R Sbjct: 129 FAGDLFRMYSKFAEKKGWRIEVMSSNEAEHGGYKEMIAKVSGEGAYGIMKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ + + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RI Sbjct: 189 VPATESQGRVHTSACTVAIMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG VV+CQ ERSQHKNKA+A +L A++ ++ ++ + A ++ + +G G Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARI--IQAEEAKRAAEESDTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ ++V++GD+ + L + Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTLYRLNEVMEGDVSSLIDPVLQEHQ 351 >gi|160900908|ref|YP_001566490.1| peptide chain release factor 1 [Delftia acidovorans SPH-1] gi|238687199|sp|A9BP60|RF1_DELAS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|160366492|gb|ABX38105.1| peptide chain release factor 1 [Delftia acidovorans SPH-1] Length = 360 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 115/344 (33%), Positives = 176/344 (51%), Gaps = 9/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + QRL LN + ++ + + + RE + + R D ++ Sbjct: 9 LERYAQRLEELNFLLSREDIMGDMKQYRAISREHADVTAIAGRYARHRQREADLAAAQDM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTESQDW 133 + D + + + +L + + LL + +AYLE+ AG GG ES + Sbjct: 69 LSDPD-MADMAQEEIASAEAELVQLEDELQRLLLPKDPDDARNAYLEIRAGTGGDESALF 127 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A L RMYTR + +K E + ++ E G K L ++G + YG L+ E G HR+ R+ Sbjct: 128 AGDLARMYTRHCDAVGWKVEIMSANESELGGYKEVVLRVEGTDVYGRLRFESGGHRVQRV 187 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 ++ R HTS ++ V P D++ I ++ +D RIDT+RASGAGGQH+N TDSAVR+ Sbjct: 188 PATETQGRIHTSACTVAVMPEPDETQAITLNPADLRIDTFRASGAGGQHINKTDSAVRVV 247 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H+PTG+V +CQ RSQH NKA+A +L+A+L E E +RE A K IG G Sbjct: 248 HLPTGIVAECQDGRSQHSNKAKALQVLQARLQEKERSERE--AKEAALRKGLIGSGDRSD 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D R N+ V++GDL D + A A + Sbjct: 306 RIRTYNF-PQGRLTDHRINLTIYKLLAVMEGDLGDVLDALQAAR 348 >gi|120610527|ref|YP_970205.1| peptide chain release factor 2 [Acidovorax citrulli AAC00-1] gi|120588991|gb|ABM32431.1| bacterial peptide chain release factor 2 (bRF-2) [Acidovorax citrulli AAC00-1] Length = 300 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 152/298 (51%), Positives = 208/298 (69%), Gaps = 1/298 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + + ++ L DN L E++ EE D + L +++ +E +F + S EAD Sbjct: 2 VVTLDKLTRELADNAELYEMSKEEGDEAGLLTIEAEAGKLRPLIEELEFRRMFSNEADPL 61 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 + ++++ AGAGGTE+ DWA MLLR Y ++AE++ FK + G+ AGIKSAT+ I+G Sbjct: 62 NCFVDIQAGAGGTEACDWAGMLLRQYLKYAERKGFKATVEDETPGDVAGIKSATIKIEGE 121 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 AYG L+ E GVHRLVR SP+DS+ RHTSF+S++VYP +DDSIEI I+ +D R DT+RA Sbjct: 122 YAYGLLRTETGVHRLVRKSPFDSSGGRHTSFASLFVYPEIDDSIEININPADVRTDTFRA 181 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQH+N TDSAVR+THIPTG+VVQCQ RSQH N+ AW LR++LY+ E++KR E Sbjct: 182 SGAGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKRMEE 241 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 E +KT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 242 QQKLEDTKTDVGWGHQIRSYVLD-NSRIKDLRTNVEVSATQKVLDGDLDVFIEASLKQ 298 >gi|82545486|ref|YP_409433.1| peptide chain release factor RF-2 [Shigella boydii Sb227] gi|82778343|ref|YP_404692.1| peptide chain release factor RF-2 [Shigella dysenteriae Sd197] gi|110643039|ref|YP_670769.1| peptide chain release factor 2 [Escherichia coli 536] gi|117625122|ref|YP_854110.1| peptide chain release factor 2 [Escherichia coli APEC O1] gi|195936508|ref|ZP_03081890.1| hypothetical protein EscherichcoliO157_08602 [Escherichia coli O157:H7 str. EC4024] gi|209920345|ref|YP_002294429.1| peptide chain release factor 2 [Escherichia coli SE11] gi|217327359|ref|ZP_03443442.1| peptide chain release factor 2 [Escherichia coli O157:H7 str. TW14588] gi|227888439|ref|ZP_04006244.1| peptide chain release factor 2 [Escherichia coli 83972] gi|237706466|ref|ZP_04536947.1| peptide chain release factor RF-2 [Escherichia sp. 3_2_53FAA] gi|254037934|ref|ZP_04871992.1| peptide chain release factor RF-2 [Escherichia sp. 1_1_43] gi|256019311|ref|ZP_05433176.1| peptide chain release factor 2 [Shigella sp. D9] gi|256024599|ref|ZP_05438464.1| peptide chain release factor 2 [Escherichia sp. 4_1_40B] gi|261226204|ref|ZP_05940485.1| peptide chain release factor 2 [Escherichia coli O157:H7 str. FRIK2000] gi|261256541|ref|ZP_05949074.1| peptide chain release factor RF-2 [Escherichia coli O157:H7 str. FRIK966] gi|293406389|ref|ZP_06650315.1| peptide chain release factor 2 [Escherichia coli FVEC1412] gi|293412249|ref|ZP_06654972.1| peptide chain release factor 2 [Escherichia coli B354] gi|293416144|ref|ZP_06658784.1| peptide chain release factor 2 [Escherichia coli B185] gi|298382125|ref|ZP_06991722.1| peptide chain release factor 2 [Escherichia coli FVEC1302] gi|300815658|ref|ZP_07095882.1| peptide chain release factor 2 [Escherichia coli MS 107-1] gi|300820694|ref|ZP_07100845.1| peptide chain release factor 2 [Escherichia coli MS 119-7] gi|300896214|ref|ZP_07114763.1| peptide chain release factor 2 [Escherichia coli MS 198-1] gi|300906560|ref|ZP_07124251.1| peptide chain release factor 2 [Escherichia coli MS 84-1] gi|300921222|ref|ZP_07137595.1| peptide chain release factor 2 [Escherichia coli MS 115-1] gi|300925129|ref|ZP_07141043.1| peptide chain release factor 2 [Escherichia coli MS 182-1] gi|300928174|ref|ZP_07143716.1| peptide chain release factor 2 [Escherichia coli MS 187-1] gi|300936044|ref|ZP_07150992.1| peptide chain release factor 2 [Escherichia coli MS 21-1] gi|300947611|ref|ZP_07161783.1| peptide chain release factor 2 [Escherichia coli MS 116-1] gi|300954270|ref|ZP_07166733.1| peptide chain release factor 2 [Escherichia coli MS 175-1] gi|300980316|ref|ZP_07174970.1| peptide chain release factor 2 [Escherichia coli MS 45-1] gi|300995678|ref|ZP_07181206.1| peptide chain release factor 2 [Escherichia coli MS 200-1] gi|301027417|ref|ZP_07190754.1| peptide chain release factor 2 [Escherichia coli MS 69-1] gi|301027812|ref|ZP_07191117.1| peptide chain release factor 2 [Escherichia coli MS 196-1] gi|301049326|ref|ZP_07196296.1| peptide chain release factor 2 [Escherichia coli MS 185-1] gi|301303048|ref|ZP_07209175.1| peptide chain release factor 2 [Escherichia coli MS 124-1] gi|301327291|ref|ZP_07220547.1| peptide chain release factor 2 [Escherichia coli MS 78-1] gi|301643760|ref|ZP_07243798.1| peptide chain release factor 2 [Escherichia coli MS 146-1] gi|306812207|ref|ZP_07446405.1| peptide chain release factor 2 [Escherichia coli NC101] gi|307139578|ref|ZP_07498934.1| peptide chain release factor 2 [Escherichia coli H736] gi|307310490|ref|ZP_07590138.1| peptide chain release factor 2 [Escherichia coli W] gi|309785302|ref|ZP_07679933.1| peptide chain release factor 2 [Shigella dysenteriae 1617] gi|309793962|ref|ZP_07688387.1| peptide chain release factor 2 [Escherichia coli MS 145-7] gi|312964850|ref|ZP_07779090.1| peptide chain release factor 2 [Escherichia coli 2362-75] gi|312972868|ref|ZP_07787041.1| peptide chain release factor 2 [Escherichia coli 1827-70] gi|331643580|ref|ZP_08344711.1| peptide chain release factor 2 [Escherichia coli H736] gi|331648636|ref|ZP_08349724.1| peptide chain release factor 2 [Escherichia coli M605] gi|331654388|ref|ZP_08355388.1| peptide chain release factor 2 [Escherichia coli M718] gi|331659020|ref|ZP_08359962.1| peptide chain release factor 2 [Escherichia coli TA206] gi|331664463|ref|ZP_08365369.1| peptide chain release factor 2 [Escherichia coli TA143] gi|331669625|ref|ZP_08370471.1| peptide chain release factor 2 [Escherichia coli TA271] gi|331678877|ref|ZP_08379551.1| peptide chain release factor 2 [Escherichia coli H591] gi|331684516|ref|ZP_08385108.1| peptide chain release factor 2 [Escherichia coli H299] gi|81242491|gb|ABB63201.1| peptide chain release factor RF-2 [Shigella dysenteriae Sd197] gi|81246897|gb|ABB67605.1| peptide chain release factor RF-2 [Shigella boydii Sb227] gi|110344631|gb|ABG70868.1| peptide chain release factor 2 [Escherichia coli 536] gi|115514246|gb|ABJ02321.1| peptide chain release factor 2 [Escherichia coli APEC O1] gi|209913604|dbj|BAG78678.1| peptide chain release factor 2 [Escherichia coli SE11] gi|217319726|gb|EEC28151.1| peptide chain release factor 2 [Escherichia coli O157:H7 str. TW14588] gi|226839558|gb|EEH71579.1| peptide chain release factor RF-2 [Escherichia sp. 1_1_43] gi|226899506|gb|EEH85765.1| peptide chain release factor RF-2 [Escherichia sp. 3_2_53FAA] gi|227834708|gb|EEJ45174.1| peptide chain release factor 2 [Escherichia coli 83972] gi|281179896|dbj|BAI56226.1| peptide chain release factor 2 [Escherichia coli SE15] gi|281602223|gb|ADA75207.1| Peptide chain release factor 2 [Shigella flexneri 2002017] gi|284922839|emb|CBG35928.1| peptide chain release factor 2 (RF-2) [Escherichia coli 042] gi|291426395|gb|EFE99427.1| peptide chain release factor 2 [Escherichia coli FVEC1412] gi|291432333|gb|EFF05315.1| peptide chain release factor 2 [Escherichia coli B185] gi|291469020|gb|EFF11511.1| peptide chain release factor 2 [Escherichia coli B354] gi|298277265|gb|EFI18781.1| peptide chain release factor 2 [Escherichia coli FVEC1302] gi|299879074|gb|EFI87285.1| peptide chain release factor 2 [Escherichia coli MS 196-1] gi|300298925|gb|EFJ55310.1| peptide chain release factor 2 [Escherichia coli MS 185-1] gi|300304786|gb|EFJ59306.1| peptide chain release factor 2 [Escherichia coli MS 200-1] gi|300318731|gb|EFJ68515.1| peptide chain release factor 2 [Escherichia coli MS 175-1] gi|300359948|gb|EFJ75818.1| peptide chain release factor 2 [Escherichia coli MS 198-1] gi|300394925|gb|EFJ78463.1| peptide chain release factor 2 [Escherichia coli MS 69-1] gi|300401599|gb|EFJ85137.1| peptide chain release factor 2 [Escherichia coli MS 84-1] gi|300409324|gb|EFJ92862.1| peptide chain release factor 2 [Escherichia coli MS 45-1] gi|300411828|gb|EFJ95138.1| peptide chain release factor 2 [Escherichia coli MS 115-1] gi|300418731|gb|EFK02042.1| peptide chain release factor 2 [Escherichia coli MS 182-1] gi|300452808|gb|EFK16428.1| peptide chain release factor 2 [Escherichia coli MS 116-1] gi|300458836|gb|EFK22329.1| peptide chain release factor 2 [Escherichia coli MS 21-1] gi|300463814|gb|EFK27307.1| peptide chain release factor 2 [Escherichia coli MS 187-1] gi|300526958|gb|EFK48027.1| peptide chain release factor 2 [Escherichia coli MS 119-7] gi|300531587|gb|EFK52649.1| peptide chain release factor 2 [Escherichia coli MS 107-1] gi|300841712|gb|EFK69472.1| peptide chain release factor 2 [Escherichia coli MS 124-1] gi|300846154|gb|EFK73914.1| peptide chain release factor 2 [Escherichia coli MS 78-1] gi|301077859|gb|EFK92665.1| peptide chain release factor 2 [Escherichia coli MS 146-1] gi|305854245|gb|EFM54683.1| peptide chain release factor 2 [Escherichia coli NC101] gi|306909385|gb|EFN39880.1| peptide chain release factor 2 [Escherichia coli W] gi|307554867|gb|ADN47642.1| peptide chain release factor RF-2 [Escherichia coli ABU 83972] gi|307625536|gb|ADN69840.1| peptide chain release factor 2 [Escherichia coli UM146] gi|308122369|gb|EFO59631.1| peptide chain release factor 2 [Escherichia coli MS 145-7] gi|308926422|gb|EFP71898.1| peptide chain release factor 2 [Shigella dysenteriae 1617] gi|310332810|gb|EFQ00024.1| peptide chain release factor 2 [Escherichia coli 1827-70] gi|312290406|gb|EFR18286.1| peptide chain release factor 2 [Escherichia coli 2362-75] gi|313647930|gb|EFS12376.1| peptide chain release factor 2 [Shigella flexneri 2a str. 2457T] gi|315062195|gb|ADT76522.1| peptide chain release factor RF-2 [Escherichia coli W] gi|315256773|gb|EFU36741.1| peptide chain release factor 2 [Escherichia coli MS 85-1] gi|315289447|gb|EFU48842.1| peptide chain release factor 2 [Escherichia coli MS 110-3] gi|315293877|gb|EFU53229.1| peptide chain release factor 2 [Escherichia coli MS 153-1] gi|315295678|gb|EFU54998.1| peptide chain release factor 2 [Escherichia coli MS 16-3] gi|315614954|gb|EFU95592.1| peptide chain release factor 2 [Escherichia coli 3431] gi|320175922|gb|EFW51000.1| peptide chain release factor 2 [Shigella dysenteriae CDC 74-1112] gi|320182207|gb|EFW57110.1| peptide chain release factor 2 [Shigella boydii ATCC 9905] gi|320184566|gb|EFW59367.1| peptide chain release factor 2 [Shigella flexneri CDC 796-83] gi|320189234|gb|EFW63893.1| peptide chain release factor 2 [Escherichia coli O157:H7 str. EC1212] gi|320195009|gb|EFW69638.1| peptide chain release factor 2 [Escherichia coli WV_060327] gi|320202550|gb|EFW77120.1| peptide chain release factor 2 [Escherichia coli EC4100B] gi|320640534|gb|EFX10073.1| peptide chain release factor 2 [Escherichia coli O157:H7 str. G5101] gi|320645781|gb|EFX14766.1| peptide chain release factor 2 [Escherichia coli O157:H- str. 493-89] gi|320651081|gb|EFX19521.1| peptide chain release factor 2 [Escherichia coli O157:H- str. H 2687] gi|320656577|gb|EFX24473.1| peptide chain release factor 2 [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662097|gb|EFX29498.1| peptide chain release factor 2 [Escherichia coli O55:H7 str. USDA 5905] gi|320667172|gb|EFX34135.1| peptide chain release factor 2 [Escherichia coli O157:H7 str. LSU-61] gi|323154771|gb|EFZ40969.1| peptide chain release factor 2 [Escherichia coli EPECa14] gi|323162519|gb|EFZ48369.1| peptide chain release factor 2 [Escherichia coli E128010] gi|323167904|gb|EFZ53594.1| peptide chain release factor 2 [Shigella sonnei 53G] gi|323173888|gb|EFZ59517.1| peptide chain release factor 2 [Escherichia coli LT-68] gi|323180334|gb|EFZ65886.1| peptide chain release factor 2 [Escherichia coli 1180] gi|323183444|gb|EFZ68841.1| peptide chain release factor 2 [Escherichia coli 1357] gi|323188711|gb|EFZ73996.1| peptide chain release factor 2 [Escherichia coli RN587/1] gi|323935878|gb|EGB32177.1| peptide chain release 2 [Escherichia coli E1520] gi|323941589|gb|EGB37769.1| peptide chain release [Escherichia coli E482] gi|323946624|gb|EGB42647.1| peptide chain release 2 [Escherichia coli H120] gi|323951671|gb|EGB47546.1| peptide chain release [Escherichia coli H252] gi|323957389|gb|EGB53111.1| peptide chain release [Escherichia coli H263] gi|323960813|gb|EGB56434.1| peptide chain release [Escherichia coli H489] gi|323966691|gb|EGB62123.1| peptide chain release [Escherichia coli M863] gi|323971672|gb|EGB66901.1| peptide chain release [Escherichia coli TA007] gi|323978818|gb|EGB73899.1| peptide chain release [Escherichia coli TW10509] gi|324005542|gb|EGB74761.1| peptide chain release factor 2 [Escherichia coli MS 57-2] gi|324011760|gb|EGB80979.1| peptide chain release factor 2 [Escherichia coli MS 60-1] gi|324017287|gb|EGB86506.1| peptide chain release factor 2 [Escherichia coli MS 117-3] gi|324115093|gb|EGC09058.1| peptide chain release [Escherichia fergusonii B253] gi|324119931|gb|EGC13810.1| peptide chain release [Escherichia coli E1167] gi|325498452|gb|EGC96311.1| peptide chain release factor 2 [Escherichia fergusonii ECD227] gi|326339026|gb|EGD62841.1| peptide chain release factor 2 [Escherichia coli O157:H7 str. 1044] gi|326343092|gb|EGD66860.1| peptide chain release factor 2 [Escherichia coli O157:H7 str. 1125] gi|327251653|gb|EGE63339.1| peptide chain release factor 2 [Escherichia coli STEC_7v] gi|331037051|gb|EGI09275.1| peptide chain release factor 2 [Escherichia coli H736] gi|331042383|gb|EGI14525.1| peptide chain release factor 2 [Escherichia coli M605] gi|331047770|gb|EGI19847.1| peptide chain release factor 2 [Escherichia coli M718] gi|331053602|gb|EGI25631.1| peptide chain release factor 2 [Escherichia coli TA206] gi|331058394|gb|EGI30375.1| peptide chain release factor 2 [Escherichia coli TA143] gi|331063293|gb|EGI35206.1| peptide chain release factor 2 [Escherichia coli TA271] gi|331073707|gb|EGI45028.1| peptide chain release factor 2 [Escherichia coli H591] gi|331078131|gb|EGI49337.1| peptide chain release factor 2 [Escherichia coli H299] gi|332086815|gb|EGI91951.1| peptide chain release factor 2 [Shigella boydii 5216-82] gi|332087643|gb|EGI92770.1| peptide chain release factor 2 [Shigella dysenteriae 155-74] gi|332090885|gb|EGI95976.1| peptide chain release factor 2 [Shigella boydii 3594-74] gi|332344786|gb|AEE58120.1| peptide chain release factor protein PrfB [Escherichia coli UMNK88] gi|332752927|gb|EGJ83311.1| peptide chain release factor 2 [Shigella flexneri 4343-70] gi|332753726|gb|EGJ84105.1| peptide chain release factor 2 [Shigella flexneri K-671] gi|332754583|gb|EGJ84949.1| peptide chain release factor 2 [Shigella flexneri 2747-71] gi|332765821|gb|EGJ96034.1| peptide chain release factor 2 [Shigella flexneri 2930-71] gi|332999677|gb|EGK19262.1| peptide chain release factor 2 [Shigella flexneri VA-6] gi|333000272|gb|EGK19855.1| peptide chain release factor 2 [Shigella flexneri K-218] gi|333015042|gb|EGK34385.1| peptide chain release factor 2 [Shigella flexneri K-304] Length = 293 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 169/292 (57%), Positives = 208/292 (71%), Gaps = 1/292 (0%) Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ Sbjct: 1 MKQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDI 60 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL Sbjct: 61 QAGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWL 120 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQ Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQ 180 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E Sbjct: 181 HVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMED 240 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 241 NKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291 >gi|325285304|ref|YP_004261094.1| peptide chain release factor 1 [Cellulophaga lytica DSM 7489] gi|324320758|gb|ADY28223.1| Peptide chain release factor 1 [Cellulophaga lytica DSM 7489] Length = 358 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 103/346 (29%), Positives = 170/346 (49%), Gaps = 12/346 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCD 68 + D + QR ++ P + + L RE + L E + + + Sbjct: 1 MIDKLNIVKQRFDEVSDLIIQPDIISDQKRYVELNREYKDLKKLCDKRELYLEFTNNIEE 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGG 127 ++ + + + + + + E + + DS + +EV AG GG Sbjct: 61 ANEIIADGSDAEMVEMAKMQLEEAKAGLPPLEEEIKLLLIPKDPEDSKNVVVEVRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYT++ E + +KT +++ DG G K + G YG LK E GV Sbjct: 121 DEASIFAGDLFRMYTKYCESKGWKTNVIDLSDGTSGGYKEIQFEVTGDEVYGTLKFEAGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS +++ V P +D I D RID + +SG GGQ VNTT Sbjct: 181 HRVQRVPQTETQGRVHTSAATVMVLPEAEDFDVQ-IDPKDVRIDFFCSSGPGGQSVNTTY 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL K++E +++ Sbjct: 240 SAVRLTHVPTGLVAQCQDQKSQHKNKEKAFRVLRSRLYDLELAKKQEE--DAAKRNSQVS 297 Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G + IR+Y P V D R + ++++GD+ + Sbjct: 298 SGDRSAKIRTYNY-PQGRVTDHRIGLTLYDLQNIINGDIQKIIDEL 342 >gi|259909551|ref|YP_002649907.1| peptide chain release factor 2 [Erwinia pyrifoliae Ep1/96] gi|224965173|emb|CAX56705.1| peptide chain release factor 2 [Erwinia pyrifoliae Ep1/96] Length = 293 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 167/290 (57%), Positives = 211/290 (72%), Gaps = 1/290 (0%) Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D LLELA+E +D E + L + ++ +F + SGE DS D Y+++ A Sbjct: 3 QGLEDVSGLLELAVEAEDEETFNEAVNELDGLDKKLGELEFRRMFSGEYDSADCYMDIQA 62 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTE+QDWA+MLLRMY RWAE + FKTE +E DGE AG KSAT+ I G A+GWL+ Sbjct: 63 GSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGEVAGTKSATIKIIGDYAFGWLRT 122 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS RRHTSFSS+++YP VDD+I+IEI+ +D RID YRASGAGGQHV Sbjct: 123 ETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEINPADLRIDVYRASGAGGQHV 182 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRITH+PT +VVQCQ +RSQHKNK QA+ LRAKLYE E+QK+ E +K Sbjct: 183 NKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQTAEDNK 242 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 ++IGWG QIRSYVL +KDLRT++E + VLDGDLD F++A+L Sbjct: 243 SDIGWGSQIRSYVLDD-SRIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 291 >gi|167993219|ref|ZP_02574314.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205328702|gb|EDZ15466.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] Length = 360 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 111/335 (33%), Positives = 174/335 (51%), Gaps = 3/335 (0%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE ++ + + Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQIR 313 +PTG+VV+CQ ERSQHKNKA+A ++L A+++ E K ++ A+ + + R Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKCQQAEASTRRNLLGSGDRSDRNR 308 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +Y P V D R N+ + ++G LD ++ Sbjct: 309 TYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIE 342 >gi|283835350|ref|ZP_06355091.1| peptide chain release factor 2 [Citrobacter youngae ATCC 29220] gi|291068515|gb|EFE06624.1| peptide chain release factor 2 [Citrobacter youngae ATCC 29220] Length = 293 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 168/290 (57%), Positives = 207/290 (71%), Gaps = 1/290 (0%) Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ A Sbjct: 3 QGLEDVSGLLELAVEADDEETFNEAVAELDTLEDKLAQLEFRRMFSGEYDSADCYLDIQA 62 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTE+QDWA+ML+RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 63 GSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIRIAGEYAYGWLRT 122 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHV Sbjct: 123 ETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHV 182 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K Sbjct: 183 NRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNK 242 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 ++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 243 SDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291 >gi|329296879|ref|ZP_08254215.1| peptide chain release factor 1 [Plautia stali symbiont] Length = 293 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 170/292 (58%), Positives = 213/292 (72%), Gaps = 1/292 (0%) Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +Q L D LLELA+E DD E L + +++ +F + SGE DS D Y+++ Sbjct: 1 MQQGLEDVQGLLELAVEADDEETFNEAVVELDALDVKLGELEFRRMFSGEYDSADCYMDI 60 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E +GE AG KSAT+ I G AYGWL Sbjct: 61 QAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESEGEVAGTKSATIKIIGDYAYGWL 120 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS RRHTSFSS+++YP VDDSI+IEI+ +D RID YRASGAGGQ Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDSIDIEINPADLRIDVYRASGAGGQ 180 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+ LRAKLYE E+QK+ E Sbjct: 181 HVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQAAEE 240 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K++IGWG QIRSYVL +KDLRT++E + VLDGDLD F++A+L Sbjct: 241 NKSDIGWGSQIRSYVLDD-SRIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 291 >gi|158520489|ref|YP_001528359.1| peptide chain release factor 1 [Desulfococcus oleovorans Hxd3] gi|238686878|sp|A8ZTL8|RF1_DESOH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|158509315|gb|ABW66282.1| peptide chain release factor 1 [Desulfococcus oleovorans Hxd3] Length = 356 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 110/345 (31%), Positives = 166/345 (48%), Gaps = 11/345 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL- 70 +FD + +R L DP + + + RE L + + + + + Sbjct: 1 MFDRLQDVERRFGELEGLMADPSIVNDREAYQKHSREHAELADIVDAYRRYKAVSDEIEK 60 Query: 71 --ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 LLE E +E S + Q D+ + +E+ AG GG Sbjct: 61 SRDLLEDRDPEIRELAKEEISRLKDERERLDGELQNLLTPKDPNDNKNVLVEIRAGTGGE 120 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A+ L RMY R+AE +KTE + G K ++ G AY LK E G+H Sbjct: 121 EASLFAHDLFRMYWRYAETMGWKTEIMSSSVTGSGGFKEVIFMVYGKGAYSHLKFESGIH 180 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ ++ R HTS ++ V + +E+ I S+ + D +R+SG GGQ VNTTDS Sbjct: 181 RVQRVPETEAQGRIHTSAVTVAVLA-EAEEVELHIDPSEIKTDVFRSSGPGGQSVNTTDS 239 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+TH+PTGVVV CQ E+SQ KNK +A +LRA+L + +Q + E I ++ K ++G Sbjct: 240 AVRLTHLPTGVVVICQDEKSQLKNKNKAMKVLRARLLDRMIQDQNE--KIAQNRKDQVGS 297 Query: 309 GR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G +IR+Y P V D R I VL GDL + + Sbjct: 298 GDRSGRIRTYNF-PQGRVTDHRAGITLYKLESVLQGDLSELVNGL 341 >gi|332701398|ref|ZP_08421486.1| Peptide chain release factor 1 [Desulfovibrio africanus str. Walvis Bay] gi|332551547|gb|EGJ48591.1| Peptide chain release factor 1 [Desulfovibrio africanus str. Walvis Bay] Length = 357 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 117/346 (33%), Positives = 180/346 (52%), Gaps = 11/346 (3%) Query: 13 LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68 +F ++ ++ + L ++ P ++ + K L + R L ++ +E + L D Sbjct: 1 MFAKLESLERQFADLESQLSAPDIFNDQERYKKLTKARADLAQVVACFQEFKKLSRDLED 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 N +L A E E + Q + E Q L D D LE+ AG GG Sbjct: 61 NREMLADADPEIRAMAESEIASIKQALPRLEEKLQLLLLPKDPLDEKDVILEIRAGTGGE 120 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMY R+AE+ +K E L H+ G K I G Y LK E G+H Sbjct: 121 EASLFAADLFRMYMRYAERVGWKVEMLSEHESATGGFKEVIASISGERVYSRLKYESGIH 180 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ ++ R HTS ++ V P + ++++I ++ RID YRASGAGGQHVN T+S Sbjct: 181 RVQRVPATETQGRIHTSAVTVAVLP-EAEEVDLDIDPTELRIDVYRASGAGGQHVNKTES 239 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PT VV CQ E+SQHKNKA+A +LR+++ + R++ + + +G Sbjct: 240 AVRITHLPTNTVVTCQDEKSQHKNKAKAMKVLRSRILQSMQAARKDEEDAA--RRLLVGS 297 Query: 309 GRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G + IR+Y P + D R N+ S S V++G LDD ++A + Sbjct: 298 GDRSGRIRTYNF-PQGRITDHRINLTLYSLSAVMEGALDDLVEALI 342 >gi|325105445|ref|YP_004275099.1| bacterial peptide chain release factor 1 (bRF-1) [Pedobacter saltans DSM 12145] gi|324974293|gb|ADY53277.1| bacterial peptide chain release factor 1 (bRF-1) [Pedobacter saltans DSM 12145] Length = 358 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 103/346 (29%), Positives = 173/346 (50%), Gaps = 12/346 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + R + + +P Q++ L +E + L + + ++ + + Sbjct: 1 MLDKLEAIKLRRDDVERELSNPEATQDMKRFAQLNKEYKDLGLIVDEYYKYKNVVSNIAT 60 Query: 72 LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 ++ E D + + + + + + + D DA +E+ G GG Sbjct: 61 NKDILANEKDQELREMAKEELDVLIPEKEEMEAKIRLMLVPKDPGDEKDAIVEIRGGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR+ E + ++TE LE+ DG G K + G + YG LK E GV Sbjct: 121 DEAAIFAGDLYRMYTRYCEGKGWRTEVLEVTDGTNGGYKEVVFKVSGEDVYGTLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS +S+ V P + +++EI+ +D + T R+ GAGGQ+VN + Sbjct: 181 HRVQRVPDTETQGRVHTSAASVAVLP-EAEEVDVEINPADIEMQTSRSGGAGGQNVNKVE 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 + V++TH PTG+VV CQ ERSQ N+ +A MLR+KLYE EL K E I KT + Sbjct: 240 TKVQLTHKPTGIVVVCQVERSQLGNRERAMEMLRSKLYERELAKYNEE--IASKRKTMVS 297 Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G + IR+Y P V + R + + V++G++ + + A Sbjct: 298 TGDRSAKIRTYNY-PQGRVTEHRIGLTLYNLPAVMNGEIQEILDAL 342 >gi|313206514|ref|YP_004045691.1| bacterial peptide chain release factor 1 (brf-1) [Riemerella anatipestifer DSM 15868] gi|312445830|gb|ADQ82185.1| bacterial peptide chain release factor 1 (bRF-1) [Riemerella anatipestifer DSM 15868] gi|325336038|gb|ADZ12312.1| Protein chain release factor A [Riemerella anatipestifer RA-GD] Length = 362 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 99/346 (28%), Positives = 165/346 (47%), Gaps = 12/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + QR + + P + + L +E L + E L E+ Sbjct: 9 LEAIKQRYNEVADLIIQPDVISDQKRYSSLNKEYSDLGKIVKVFDEYSTALNAIKEADEI 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 + D ++ Q + + E AD + +E+ AG GG ES Sbjct: 69 IADGSDKDLVDLAKMEKQEAIDRIPSIEEELKYLLIPKDPADDKNVMVELRAGTGGDESA 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + + RMYT + + + +K E + ++ + G K + ++G YG +K E GVHR+ Sbjct: 129 IFVEDVYRMYTMYFKSKGWKHEVTDSNEASK-GYKELIMRVEGDGVYGIMKFESGVHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS ++ V P + +++EI+ +D + T R+ GAGGQ+VN ++ V+ Sbjct: 188 RVPETESQGRVHTSAITVAVLP-EAEEVDVEINPADIEMQTSRSGGAGGQNVNKVETKVQ 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +TH PTG+VV CQQ RSQ N+ A MLR KLY++ELQK + +I KT + G + Sbjct: 247 LTHKPTGIVVVCQQARSQLANRELAMEMLRTKLYDIELQKVQ--GDIAAQRKTMVSTGDR 304 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P V D R N + + ++GD+ + + A + + Sbjct: 305 SAKIRTYNY-PQGRVTDHRINKSIYNLDNFMNGDIQEMLDALIMAE 349 >gi|323339960|ref|ZP_08080227.1| peptide chain release factor RF1 [Lactobacillus ruminis ATCC 25644] gi|323092602|gb|EFZ35207.1| peptide chain release factor RF1 [Lactobacillus ruminis ATCC 25644] Length = 362 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 105/352 (29%), Positives = 173/352 (49%), Gaps = 12/352 (3%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 LFD R L DP + + L +E L + ++ + + Sbjct: 5 KLFDRLQMLADRYEELGELLSDPDVIADSKRFMELSKEMADLRETVEKYEKYKQVVQQIK 64 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAG 126 E+ D + + L K E + + L D D +E+ AG Sbjct: 65 DDEEMLSTGLDDEMAAMVKEELSDSKNEKQKLEQEIKILLLPKDPNDGKDLIMEIRGAAG 124 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L MY+++AE++ + E ++ + E G K L I G N + LK E G Sbjct: 125 GDEASLFAADLFSMYSKYAERQGWSIEVIDKNMTEVGGFKEIALTINGKNVWSKLKYESG 184 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P ++ +EI++ D R+D YR+SGAGGQH+N T Sbjct: 185 AHRVQRVPVTESAGRVHTSTATVVVMP-EEEDVEIDLDPKDIRVDVYRSSGAGGQHINKT 243 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+TH+PTG+VV Q +RSQ +N+ +A +L+A++Y+ K +E + E+ K+ + Sbjct: 244 SSAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDYY--KSQEQSEYDENRKSAV 301 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R + +++G+LDD + A + + Sbjct: 302 GTGDRSERIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELDDVIDALVLYDQ 352 >gi|239828604|ref|YP_002951228.1| peptide chain release factor 1 [Geobacillus sp. WCH70] gi|259585224|sp|C5D9N4|RF1_GEOSW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|239808897|gb|ACS25962.1| peptide chain release factor 1 [Geobacillus sp. WCH70] Length = 358 Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats. Identities = 115/351 (32%), Positives = 179/351 (50%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + +R LN DP + + + + +E+ L + +E + Sbjct: 1 MFERLEAVEERYEKLNQLLMDPEVINDPKKLRDYSKEQSDLSETVQTYREYKSVRKQLDE 60 Query: 72 LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + E+ D + + + Q+ + V + L D + +E+ A AGG Sbjct: 61 AKAMLEEKLDPEMREMVKEEIDELEQKEEELVNKLKILLLPKDPNDEKNVIMEIRAAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR+AE + +KTE +E G K I G AY LK E G Sbjct: 121 EEAALFAGDLYRMYTRYAESQGWKTEVIEASPTGLGGYKEIIFTIIGKGAYSKLKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ P + IE+EI+E D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLP-EMEEIEVEINEKDIRVDTFASSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+VV CQ E+SQ KNK +A +LRA++Y+ ++E A ++ K +G Sbjct: 240 SAVRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLRARIYDKY--QQEARAEYDQTRKQAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + VLDG+LD+ ++A + + Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQVLDGNLDEIIEALILDDQ 347 >gi|221068955|ref|ZP_03545060.1| peptide chain release factor 1 [Comamonas testosteroni KF-1] gi|299531475|ref|ZP_07044881.1| peptide chain release factor 1 [Comamonas testosteroni S44] gi|220713978|gb|EED69346.1| peptide chain release factor 1 [Comamonas testosteroni KF-1] gi|298720438|gb|EFI61389.1| peptide chain release factor 1 [Comamonas testosteroni S44] Length = 359 Score = 219 bits (557), Expect = 5e-55, Method: Composition-based stats. Identities = 115/343 (33%), Positives = 173/343 (50%), Gaps = 7/343 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + QRL L+ + ++ + + + RE + S D E+ Sbjct: 9 LERYAQRLQELDFLLSREDIMGDMKQYRTISREHADVTAIASRYTRYLQTEADIAAAREM 68 Query: 76 ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + QE + + + Q L D+ A++E+ AG GG ES +A Sbjct: 69 LDDPDMAEMAQEEIGSGEAELIKLEDELQRLLLPKDPDDARPAFVEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMYTR+A +K E + + E G K L I+G N YG L+ E G HR+ R+ Sbjct: 129 GDLTRMYTRYAANVGWKVEVMSASENEIGGYKEVVLRIEGDNVYGALRFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D++ I ++ +D RIDT+RASGAGGQH+N TDSAVR+ H Sbjct: 189 ATETQGRIHTSACTVAVMPEPDEAEAITLNPADLRIDTFRASGAGGQHINKTDSAVRVVH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+V +CQ RSQH NKA+A +L+A++ E E +R A K IG G + Sbjct: 249 LPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSER--AAKEAAMRKGLIGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P + D R N+ V++GDL D ++A + Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYKLLAVMEGDLGDVIQALQHAR 348 >gi|85059968|ref|YP_455670.1| peptide chain release factor RF-2 [Sodalis glossinidius str. 'morsitans'] gi|84780488|dbj|BAE75265.1| peptide chain release factor RF-2 [Sodalis glossinidius str. 'morsitans'] Length = 289 Score = 219 bits (557), Expect = 5e-55, Method: Composition-based stats. Identities = 167/287 (58%), Positives = 207/287 (72%), Gaps = 1/287 (0%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 + D LLELA+ EDD ET L ++ ++ +F + SGE DS D Y+++ AG+ Sbjct: 1 MEDVAGLLELAVGEDDEETFLETQAELDGLEAKLGQLEFRRMFSGEYDSADCYVDIQAGS 60 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDWA+MLLRMY RWAE R FKTE +E +GE AGIKS T+ + G AYGWL+ E Sbjct: 61 GGTEAQDWASMLLRMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKVIGDYAYGWLRTET 120 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVR SP+DS RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN Sbjct: 121 GVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNR 180 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T+SAVRITH+PT +V QCQ +RSQHKNK QA L+AKLYE ELQK+ E +K++ Sbjct: 181 TESAVRITHLPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFELQKKNAEKKALEDTKSD 240 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 241 IGWGSQIRSYVLDD-SRIKDLRTGVETRNAQSVLDGDLDKFIEASLK 286 >gi|15672577|ref|NP_266751.1| peptide chain release factor 1 [Lactococcus lactis subsp. lactis Il1403] gi|13878663|sp|Q9CHX3|RF1_LACLA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|12723487|gb|AAK04693.1|AE006292_13 peptide chain release factor 1 [Lactococcus lactis subsp. lactis Il1403] gi|326406096|gb|ADZ63167.1| peptide chain release factor RF-1 [Lactococcus lactis subsp. lactis CV56] Length = 357 Score = 219 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 102/352 (28%), Positives = 176/352 (50%), Gaps = 13/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---D 68 +FD ++ V R L DP + + L RE L + ++ E + L D Sbjct: 1 MFDQLESIVGRYEELGELLSDPEVVSDTKRFMELSREEADLRDKVATYNEYKKVLETISD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAG 126 + +L +DD + + + + + E+ ++ + LL + + + LE+ AG Sbjct: 61 SEEMLGEGGLDDDMKEMLKEELSSAKSQKELLEEEIKILLLPKDPNDGKNIILEIRGAAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A LL MY ++E + +K E +E + G K + LI GP+ Y LK E G Sbjct: 121 GDEAALFAGDLLNMYQHFSESQGWKFEIMEANITGIGGYKEVSALISGPSVYSKLKYESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ ++ R HTS +++ V P V++ I + D R+D Y ASGAGGQ+VN Sbjct: 181 AHRVQRVPVTETQGRVHTSTATVLVMPEVEEFEMT-IDQKDLRVDIYHASGAGGQNVNKV 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +AVR+ H+PTG+ V+ Q+ER+Q KN+ +A +L K+++ ++ E+ K+ + Sbjct: 240 ATAVRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYY--QQIELDKQNAERKSTV 297 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R + +L G +D+ + A + + Sbjct: 298 GTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKMDEVIDALIVYDQ 348 >gi|71281852|ref|YP_270226.1| peptide chain release factor 1 [Colwellia psychrerythraea 34H] gi|119361527|sp|Q47Y94|RF1_COLP3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|71147592|gb|AAZ28065.1| peptide chain release factor 1 [Colwellia psychrerythraea 34H] Length = 362 Score = 219 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 112/337 (33%), Positives = 180/337 (53%), Gaps = 5/337 (1%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R + DP + + + L +E + LD S + D + Sbjct: 9 LEVLVERFEEVQALLSDPATISDQEKFRALSKEFKQLDAVTSVFNNYKSAEDDFSTAELM 68 Query: 76 ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 ++D + K + Q L D N+ ++E+ AGAGG E+ Sbjct: 69 LKDDDPDMREMAQEEFKDAKKAVADIADELQILLLPRDPNDDNNCFVEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AEK+ +K E + ++ E+ G K + + G +G +K E G HR+ R Sbjct: 129 FAGDLFRMYSRYAEKKGWKIEVMNSNESEQGGYKELIMKVNGEGVFGHMKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P + ++ IEI+++D ++DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPATESQGRVHTSACTVVVMPEIPEADAIEINKADLKVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQ 311 THIPTGVVV+CQ++RSQHKN+AQA ++L+A+L + E +KR + G + Sbjct: 249 THIPTGVVVECQEQRSQHKNRAQAMSVLQARLQQAEDEKRRSEEESSRRNLVASGDRSER 308 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 IR+Y P + D R N+ +++++G L M+ Sbjct: 309 IRTYNF-PQGRMSDHRINLTLYRLNEIMEGSLQLVME 344 >gi|330823524|ref|YP_004386827.1| peptide chain release factor 1 [Alicycliphilus denitrificans K601] gi|329308896|gb|AEB83311.1| Peptide chain release factor 1 [Alicycliphilus denitrificans K601] Length = 371 Score = 219 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 116/343 (33%), Positives = 180/343 (52%), Gaps = 7/343 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + QRLS L+ + ++ + + + RE + + R D E+ Sbjct: 20 LERYAQRLSELDFLLSREDIMADMQQYRAISREHADVTAVAGRYARYRQREADLEGAREM 79 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + QE + ++E + Q L D +A++E+ AG GG ES +A Sbjct: 80 LEDPDMAEMAQEEIAAAEAELAQLEDELQRMLLPKDPDDERNAFVEIRAGTGGDESALFA 139 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMYTR+A + +K E + ++ E G K L I+G +AYG L+ E G HR+ R+ Sbjct: 140 GDLARMYTRYAATQGWKVEVMSANESELGGYKEVVLRIEGDHAYGRLRFESGGHRVQRVP 199 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D++ I ++ +D RIDT+RASGAGGQH+N TDSAVR+ H Sbjct: 200 ATETQGRIHTSACTVAVMPEPDEAQAITLNPADLRIDTFRASGAGGQHINKTDSAVRVVH 259 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+V +CQ RSQH NKA+A +L+A++ E E +R A K IG G + Sbjct: 260 LPTGIVAECQDGRSQHANKAKALQVLQARIQEKERSER--AAKEAALRKGLIGSGDRSDR 317 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P + D R N+ V++GDL + ++A + Sbjct: 318 IRTYNF-PQGRLTDHRINLTLYKLLAVMEGDLGEVLQALQHAR 359 >gi|30961857|gb|AAP40012.1| peptide chain release factor-2 [Citrobacter freundii] Length = 293 Score = 219 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 168/290 (57%), Positives = 207/290 (71%), Gaps = 1/290 (0%) Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ A Sbjct: 3 QGLEDVSGLLELAVEADDEETFNEAVAELDTLEDKLAQLEFRRMFSGEYDSADCYLDIQA 62 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTE+QDWA+ML+RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 63 GSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIRIAGEYAYGWLRT 122 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHV Sbjct: 123 ETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHV 182 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K Sbjct: 183 NRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTK 242 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 ++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 243 SDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291 >gi|262372379|ref|ZP_06065658.1| peptide chain release factor 1 [Acinetobacter junii SH205] gi|262312404|gb|EEY93489.1| peptide chain release factor 1 [Acinetobacter junii SH205] Length = 362 Score = 219 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 114/339 (33%), Positives = 170/339 (50%), Gaps = 7/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + L RE L + + D + Sbjct: 9 LDQLCDRHEELTALLADVEVISDNKRFRKLSREHNDLTEITEVWGKYRQAEEDIETAEMM 68 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + +E + + E + D+N AYLE+ AG GG E+ ++ Sbjct: 69 KSDPDFKDMAEEEIKENKALLVELEEQLNVLMIPKDPNDANAAYLEIRAGTGGDEAAIFS 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+++AE + ++ E L ++GE G K + G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSKYAETQGWRIEVLSENEGEHGGYKEVICRVDGEGVYGRLKFESGAHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P VD +EI+ +D RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 189 ATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDTYRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IP+GVVV+CQ+ERSQHKNKA+A +L ++L + A E + +G G + Sbjct: 249 IPSGVVVECQEERSQHKNKAKAMALLVSRLENAKR--AAADAATSEMRRDLVGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P + D R N+ +++GDL + + + Sbjct: 307 IRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 344 >gi|138896954|ref|YP_001127407.1| peptide chain release factor 1 [Geobacillus thermodenitrificans NG80-2] gi|196249772|ref|ZP_03148468.1| peptide chain release factor 1 [Geobacillus sp. G11MC16] gi|166223561|sp|A4ITK8|RF1_GEOTN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|134268467|gb|ABO68662.1| Peptide chain release factor 1 [Geobacillus thermodenitrificans NG80-2] gi|196210648|gb|EDY05411.1| peptide chain release factor 1 [Geobacillus sp. G11MC16] Length = 358 Score = 219 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 116/351 (33%), Positives = 179/351 (50%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + QR LN DP + + + + +E+ L + +E + Sbjct: 1 MFDRLEAVEQRYEKLNELLMDPAVINDPKKLRDYSKEQADLTETVQTYREYKSVRSQLAE 60 Query: 72 LLELALEEDDCSILQE----TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + E+ + + + + +R + VE + L D + +E+ A AGG Sbjct: 61 AKAMLEEKLEPELREMVKEEIDELEEREEALVEKLKVLLLPKDPNDEKNVIMEIRAAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR+AE + +KTE +E G K ++ G AY LK E G Sbjct: 121 EEAALFAGDLYRMYTRYAESQGWKTEVIEASPTGLGGYKEIIFMVNGKGAYSKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ P + +E+EI E D R+DTY +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLP-EMEEVEVEIHEKDIRVDTYASSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+VV CQ E+SQ KNK +A +LRA++Y+ ++E A ++ K +G Sbjct: 240 SAVRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLRARIYDKY--QQEARAEYDQTRKQAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + VLDG LD+ ++A + + Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDLVLDGQLDEIIEALILDDQ 347 >gi|313147825|ref|ZP_07810018.1| peptide chain release factor RF-2 [Bacteroides fragilis 3_1_12] gi|313136592|gb|EFR53952.1| peptide chain release factor RF-2 [Bacteroides fragilis 3_1_12] Length = 337 Score = 219 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 128/332 (38%), Positives = 196/332 (59%), Gaps = 11/332 (3%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 +T+ P W + +A+ M+ + L I E++ + + + D+ QE Sbjct: 2 RTQAPGFWDDQKKAEAQMKLVKGLQKWIDGYNEVKTLADELELAFDFYK--DELVTEQEV 59 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + + VE + +++L EAD L++++GAGGTESQDWA+ML+RMY R+AE Sbjct: 60 DEAYAKALEHVENLELQNMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYLRYAETN 119 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 +K + +G+EAGIK+ T+ I+G AYG+LKGE GVHRLVR+SPY++ +R TSF+S Sbjct: 120 GYKATMANLQEGDEAGIKTCTIQIEGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFAS 179 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP--------TGVV 260 ++V P+VDDSIE+ I + DT+R+ GAGGQ+VN +S VR+ + ++ Sbjct: 180 VFVTPLVDDSIEVNILPACISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEIL 239 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320 ++ + R Q KN+ A LR+ LY+ ELQ R E+ K +I WG QIRSYV Sbjct: 240 IENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD- 298 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + VKD RTN + + + V+DG ++ F+KA L Sbjct: 299 RRVKDHRTNFQTSDVNGVMDGKIEGFIKAYLM 330 >gi|302131691|ref|ZP_07257681.1| peptide chain release factor 2, programmed frameshift [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 304 Score = 219 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 166/302 (54%), Positives = 220/302 (72%), Gaps = 1/302 (0%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 L + + E+ L D LL ++ EE+D + + + + ++R++ +E +F + SGE Sbjct: 2 LAQIVETLDEMSSGLVDAKDLLLMSAEEEDQAAIDDVAAEVERLRASLEKLEFRRMFSGE 61 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F +E+ GE AGIK AT+ Sbjct: 62 MDPNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVH 121 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 IKG A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ SD RID Sbjct: 122 IKGEYAFGWLRTEIGVHRLVRKSPFDSGTRRHTSFSAVFVSPEIDDNIEIDINPSDLRID 181 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 TYR+SGAGGQHVNTTDSAVRITH+PT VV CQ ERSQH NK A MLRA+LYE E+QK Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQK 241 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R + E +K++IGWG QIRSYVL +KDLRTNIE++ VLDGD+D+++ A+L Sbjct: 242 RNAASQALEDTKSDIGWGHQIRSYVLD-ASRIKDLRTNIERSDCDKVLDGDIDEYLIASL 300 Query: 352 AI 353 Sbjct: 301 KQ 302 >gi|331674375|ref|ZP_08375135.1| peptide chain release factor 2 [Escherichia coli TA280] gi|331068469|gb|EGI39864.1| peptide chain release factor 2 [Escherichia coli TA280] Length = 291 Score = 219 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 169/290 (58%), Positives = 206/290 (71%), Gaps = 1/290 (0%) Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ A Sbjct: 1 QGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQA 60 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 61 GSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRT 120 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHV Sbjct: 121 ETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHV 180 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K Sbjct: 181 NRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNK 240 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 ++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 241 SDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 289 >gi|183599838|ref|ZP_02961331.1| hypothetical protein PROSTU_03355 [Providencia stuartii ATCC 25827] gi|188022110|gb|EDU60150.1| hypothetical protein PROSTU_03355 [Providencia stuartii ATCC 25827] Length = 293 Score = 219 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 167/290 (57%), Positives = 211/290 (72%), Gaps = 1/290 (0%) Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D LLELA+E DD E + L +++ ++E +F + SGE DS D Y+++ A Sbjct: 3 QGLEDVEGLLELAIEADDEDTFNEAGEELTQLQAKLEQLEFRRMFSGEYDSADCYIDLQA 62 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTE+QDWA+ML+RMY RWAE + FKTE +E DG+ AG+KSAT+ + G AYGWL+ Sbjct: 63 GSGGTEAQDWASMLMRMYLRWAESKGFKTEIIEESDGDVAGLKSATIKVIGDYAYGWLRT 122 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS RRHTSFSS ++YP VDD I+IEI+ +D RID YRASGAGGQHV Sbjct: 123 ESGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHV 182 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYELE+QK+ E +K Sbjct: 183 NKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMRQLKAKLYELEMQKKNADKQAMEENK 242 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 ++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 243 SDIGWGSQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 291 >gi|320538185|ref|ZP_08038080.1| peptide chain release factor 1 [Treponema phagedenis F0421] gi|320145002|gb|EFW36723.1| peptide chain release factor 1 [Treponema phagedenis F0421] Length = 371 Score = 219 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 111/355 (31%), Positives = 181/355 (50%), Gaps = 14/355 (3%) Query: 10 LGGLFD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 G + +N + + + +DP L +NV K +MR+ +L + Sbjct: 12 FGKMMKDRLENLRNQWKQVELEVQDPDLVKNVARYKDVMRQHGYLSKLMDEYDFYLQTEK 71 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHA 123 L EE D + + + + ++ ++E + + + + +E+ Sbjct: 72 QLQEAHALMQEESDHELKEMAREEMHALEKQLEQSEADLKMLLIPPDPMEEKNIIMEIRG 131 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G GG E+ +A L +MYT +AE + + E ++ ++ E G K I G YG L+ Sbjct: 132 GTGGDEAALFAADLFKMYTHYAESKNWTYEIMDANETELGGFKEIVFSISGKYVYGSLRY 191 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHR+ R+ + + R HTS ++ V P +++ + I D R+D RA G GGQ V Sbjct: 192 ESGVHRVQRVPETEGSGRIHTSAVTVAVLPEAEETEIV-IKPEDLRVDVMRAGGPGGQSV 250 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSAVR+THIPTG+VV CQ E+SQ KNKA+A +LR++LY+LE K+ + ++ K Sbjct: 251 NTTDSAVRLTHIPTGMVVICQDEKSQIKNKAKALRVLRSRLYDLEESKKNQER--AQNRK 308 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT-LAIK 354 +++G G +IR+Y P V D R N+ VL GDLD+ ++ +A + Sbjct: 309 SQVGSGDRSERIRTYNF-PQNRVTDHRINLTLYQLDAVLQGDLDEIIEPLCIAAR 362 >gi|325107093|ref|YP_004268161.1| bacterial peptide chain release factor 1 (bRF-1) [Planctomyces brasiliensis DSM 5305] gi|324967361|gb|ADY58139.1| bacterial peptide chain release factor 1 (bRF-1) [Planctomyces brasiliensis DSM 5305] Length = 358 Score = 219 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 103/347 (29%), Positives = 168/347 (48%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + QR L + DP + + + + +E L +++ D + Sbjct: 5 LETKYQRFLELEKQMADPDVLSDPQKMLAIQKEYGGLKKVAHAVRDYHTLEADIEAAEMM 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EEDD + L ++ + + + +E+ AG GG E+ Sbjct: 65 LEEEDDPDDREYAQSELDALEKRRDKMAEELEDLATAGDSITRGGLIMEIRAGTGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MY+R+ E R +K E ++ H E G+K + G A+ L+ E G HR+ Sbjct: 125 LFALNLYEMYSRYIETRGWKKEVMDFHPTEMGGVKEVVFSVSGEGAFHELQFESGGHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P D +EI+I D ++DT+RASG GGQ VN T+SA+R Sbjct: 185 RVPETETQGRIHTSAATVAVLP-EADEVEIDIKPEDLKVDTFRASGPGGQKVNKTESAIR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG VV CQ E+SQHKN+A A +LR+++ LE Q++ + +T IG G Sbjct: 244 ITHLPTGTVVTCQDEKSQHKNRASAMRVLRSRI--LENQQQAADSERASQRRTLIGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + ++ G+L++ + L + Sbjct: 302 SSRIRTYNY-PQGRVTDHRIGLTLHKLDQIMAGNLEELVSGLLEFDR 347 >gi|295400673|ref|ZP_06810650.1| peptide chain release factor 1 [Geobacillus thermoglucosidasius C56-YS93] gi|294977254|gb|EFG52855.1| peptide chain release factor 1 [Geobacillus thermoglucosidasius C56-YS93] Length = 358 Score = 219 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 120/351 (34%), Positives = 186/351 (52%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68 +F+ + +R LN DP + + + + +E+ L+ + +E + +L D Sbjct: 1 MFERLEAVEERYEKLNQLLMDPEVINDPKKLRDYSKEQSDLEETVQTYREYKSVCKQLDD 60 Query: 69 NLILLELALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 +LE L+ + +++E D QR + + + L D + +E+ A AGG Sbjct: 61 AKAMLEEKLDPEMREMVKEEIDELEQRQEELINKLKILLLPKDPNDEKNVIMEIRAAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR+AE + +KTE +E G K I G AY LK E G Sbjct: 121 EEAALFAGDLYRMYTRYAESQGWKTEVIEASPTGLGGYKEIIFTINGKGAYSKLKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ P + IE+EI+E D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLP-EMEEIEVEINEKDIRVDTFASSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+VV CQ E+SQ KNK +A +LRA++Y+ ++E A ++ K +G Sbjct: 240 SAVRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLRARIYDKY--QQEARAEYDQTRKQAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + VLDG LD+ ++A + + Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQVLDGSLDEIIEALILDDQ 347 >gi|222152015|ref|YP_002561175.1| peptide chain release factor 1 [Macrococcus caseolyticus JCSC5402] gi|254790887|sp|B9E8G1|RF1_MACCJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|222121144|dbj|BAH18479.1| peptide chain release factor 1 [Macrococcus caseolyticus JCSC5402] Length = 358 Score = 219 bits (557), Expect = 6e-55, Method: Composition-based stats. Identities = 112/351 (31%), Positives = 184/351 (52%), Gaps = 13/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + QR LN DP + + + + +E+ L + +E ++ Sbjct: 1 MFDQLEIVEQRYEQLNELLSDPDIVSDTDKLREYSKEQADLQETVEVYREYKEVKQQLEE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 LE+ E D + + + +K ++ + + D + +E+ AGG Sbjct: 61 ALEMMGEASDADEQEMIKEEINTLKPQIPELEERMKLLLIPKDPMDDKNVVMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+R++E++ +K E +E ++ + G K + +I G AY LK E G Sbjct: 121 DEANIFAGDLFRMYSRFSEEQGWKIEVMETNEADHGGFKEISFIIIGKGAYSKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +S R HTS +++ V P + +EIEI + D RI+TYR+SG+GGQHVNTTD Sbjct: 181 HRVQRIPTTESGGRIHTSTATVAVLP-EVEDVEIEIRQEDLRIETYRSSGSGGQHVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTG+V E+SQ KN+ +A +L+ ++++ +LQ EE A E K+ +G Sbjct: 240 SAVRITHIPTGIVATSS-EKSQIKNREKALKLLKTRVFDAKLQ--EEQAKYSEQRKSAVG 296 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++G L + + A ++ Sbjct: 297 TGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIVEGKLGEIIDALTIAEQ 346 >gi|213962528|ref|ZP_03390790.1| peptide chain release factor 2 [Capnocytophaga sputigena Capno] gi|213954854|gb|EEB66174.1| peptide chain release factor 2 [Capnocytophaga sputigena Capno] Length = 317 Score = 219 bits (557), Expect = 7e-55, Method: Composition-based stats. Identities = 141/308 (45%), Positives = 211/308 (68%), Gaps = 2/308 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRE + + +E + D +LL+ E + + + +E +F Sbjct: 2 MRELRTQKKWVEDYEEAESLTSDVEVLLDFFKEGEATADEVDQQYAQALHAIEAL--EFR 59 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++LS E D+ A L++ AGAGGTES DWA+MLLRMYT W +K+K + L +G+ AGI Sbjct: 60 NMLSDEGDAMSAVLQITAGAGGTESCDWASMLLRMYTMWCNNQKYKVKTLNFQEGDVAGI 119 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ T+ I+G A+G+LKGE GVHRLVRISP+DSN++RHTSF+S++VYP+ DD+IEIEI+ Sbjct: 120 KTVTIEIEGEYAFGYLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDTIEIEINP 179 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D +T R+SGAGGQ+VN ++AVR+ H PTG++++ + RSQ NK +A +L+++LY Sbjct: 180 ADITFETMRSSGAGGQNVNKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQLLKSQLY 239 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KR+ + E+ K +I WG QIR+YV+ PY++VKD+RTN E T V++G+LD+ Sbjct: 240 EIELKKRQAKRDEIEAGKMKIEWGSQIRNYVMHPYKLVKDVRTNYESTDVDSVMNGELDE 299 Query: 346 FMKATLAI 353 F+KA L + Sbjct: 300 FLKAYLML 307 >gi|226952752|ref|ZP_03823216.1| peptide chain release factor 1 [Acinetobacter sp. ATCC 27244] gi|294650077|ref|ZP_06727461.1| peptide chain release factor RF1 [Acinetobacter haemolyticus ATCC 19194] gi|226836501|gb|EEH68884.1| peptide chain release factor 1 [Acinetobacter sp. ATCC 27244] gi|292824028|gb|EFF82847.1| peptide chain release factor RF1 [Acinetobacter haemolyticus ATCC 19194] Length = 362 Score = 219 bits (557), Expect = 7e-55, Method: Composition-based stats. Identities = 114/339 (33%), Positives = 169/339 (49%), Gaps = 7/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + L RE L + + D + Sbjct: 9 LDQLCDRHEELTALLADVEVISDNKRFRKLSREHNDLTEITEVWGKYRQAEEDIETAEMM 68 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + +E + + + D+N AYLE+ AG GG E+ ++ Sbjct: 69 KSDPDFKDMAEEEIKENKARLVELEDQLNVLMIPKDPNDANAAYLEIRAGTGGDEAAIFS 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+++AE + ++ E L ++GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSKYAETQGWRIEVLSENEGEHGGYKEVICRIDGEGVYGRLKFESGAHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P VD +EI+ +D RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 189 ATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDTYRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IP+GVVV+CQ+ERSQHKNKA+A +L ++L + A E + +G G + Sbjct: 249 IPSGVVVECQEERSQHKNKAKAMALLVSRLENAKR--AAADAATSEMRRDLVGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P + D R N+ +++GDL + + + Sbjct: 307 IRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 344 >gi|238783657|ref|ZP_04627677.1| Peptide chain release factor 2 [Yersinia bercovieri ATCC 43970] gi|238715370|gb|EEQ07362.1| Peptide chain release factor 2 [Yersinia bercovieri ATCC 43970] Length = 289 Score = 219 bits (557), Expect = 7e-55, Method: Composition-based stats. Identities = 166/288 (57%), Positives = 207/288 (71%), Gaps = 1/288 (0%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 + D LLELA+E DD E L + ++ +F + SGE DS + YL++ AG+ Sbjct: 1 MEDVTGLLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQAGS 60 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDWA+MLLRMY RWAE + FKTE +E DG+ AG+KSAT+ I G A+GWL+ E Sbjct: 61 GGTEAQDWASMLLRMYLRWAESKGFKTEIIEESDGDVAGLKSATIKIIGEYAFGWLRTET 120 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN Sbjct: 121 GVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNK 180 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ + E +K++ Sbjct: 181 TESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDNKSD 240 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 241 IGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 287 >gi|332160509|ref|YP_004297086.1| peptide chain release factor 2 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318607022|emb|CBY28520.1| peptide chain release factor 2; programmed frameshift-containing [Yersinia enterocolitica subsp. palearctica Y11] gi|325664739|gb|ADZ41383.1| peptide chain release factor 2 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330863446|emb|CBX73565.1| peptide chain release factor 2 [Yersinia enterocolitica W22703] Length = 289 Score = 219 bits (557), Expect = 7e-55, Method: Composition-based stats. Identities = 166/288 (57%), Positives = 207/288 (71%), Gaps = 1/288 (0%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 + D LLELA+E DD E L + ++ +F + SGE DS + YL++ AG+ Sbjct: 1 MDDVTGLLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQAGS 60 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDWA+MLLRMY RWAE + FKTE +E DG+ AG+KSAT+ I G A+GWL+ E Sbjct: 61 GGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGDVAGLKSATIKIIGDYAFGWLRTET 120 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN Sbjct: 121 GVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNK 180 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ + E +K++ Sbjct: 181 TESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQMLEDNKSD 240 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 241 IGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 287 >gi|229496751|ref|ZP_04390462.1| peptide chain release factor 1 [Porphyromonas endodontalis ATCC 35406] gi|229316297|gb|EEN82219.1| peptide chain release factor 1 [Porphyromonas endodontalis ATCC 35406] Length = 362 Score = 219 bits (557), Expect = 7e-55, Method: Composition-based stats. Identities = 116/345 (33%), Positives = 166/345 (48%), Gaps = 11/345 (3%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 L N R + DP + + L +E + L+ +E + Sbjct: 7 LLHLQNLEARFEEVALLITDPSVIADDKRFVRLSKEYRRLEELHQAHEEYNRLKLNRQEA 66 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGT 128 +EL DD + + + + Q L D +A +E+ AG GG Sbjct: 67 MELLNGTDDEEMKALAKEEIAFADEQCPQLQEKIALLLLPDDPEDGKNAIMEIRAGTGGD 126 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L +MYTR+ E ++ E +G G K + G NAYG LK E GVH Sbjct: 127 EAALFARDLFKMYTRFVEGLGWRVEVSSYTEGTLGGYKEIVFSVTGDNAYGTLKYESGVH 186 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ ++ R HTS +++ V+P D+ I ESD RIDT+ +SGAGGQ VNTT S Sbjct: 187 RVQRVPETEAQGRIHTSAATVAVFPEADEFDVE-IKESDLRIDTFCSSGAGGQSVNTTYS 245 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRI H+PTG+ VQ Q ERSQ KNKA+A LR+++Y LE QK + + KT + Sbjct: 246 AVRIVHVPTGITVQSQDERSQLKNKAKALTELRSRIYNLEHQKYLDE--VASRRKTMVST 303 Query: 309 GRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G + IR+Y P + D R + + VLDGDL + A Sbjct: 304 GDRSAKIRTYNY-PQGRLTDHRIGLTLYNLQAVLDGDLKPIIDAL 347 >gi|58583231|ref|YP_202247.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84625067|ref|YP_452439.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188575465|ref|YP_001912394.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae PXO99A] gi|75434334|sp|Q5GWQ9|RF1_XANOR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361638|sp|Q2NZW2|RF1_XANOM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238689539|sp|B2SQN5|RF1_XANOP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|58427825|gb|AAW76862.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae KACC10331] gi|84369007|dbj|BAE70165.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188519917|gb|ACD57862.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae PXO99A] Length = 361 Score = 219 bits (557), Expect = 7e-55, Method: Composition-based stats. Identities = 110/345 (31%), Positives = 172/345 (49%), Gaps = 8/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R L DP + N + + L RE L+ +++ D + Sbjct: 9 LEALAERREELQHLLSDPDVVNNNDKFRTLSRELSQLEPVAVALEDEARAKADLSAAEAM 68 Query: 76 ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E Q + + D + +LEV AG GG E+ +A Sbjct: 69 RTDPEMRELAEEEIAAAQARLEELDTQLASLLVPRDPRDDGNLFLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+AE++ +K E GE G K + G AY LK E G HR+ R+ Sbjct: 129 GDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ + P DD EI I+ +D ++DT+R+SGAGGQHVN T+SA+RITH Sbjct: 189 ATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDTFRSSGAGGQHVNKTESAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311 +P+GVVV+CQ ERSQH N+ +A L+A+L + E K A ++ K ++G G + Sbjct: 249 VPSGVVVECQTERSQHANRDKAMKRLKAQLLDTEHSK--AAAAQAQTRKLQVGSGDRSQR 306 Query: 312 IRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R + ++++GDLD + L + Sbjct: 307 IRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIARLLHEHQ 350 >gi|126172944|ref|YP_001049093.1| peptide chain release factor 1 [Shewanella baltica OS155] gi|217974700|ref|YP_002359451.1| peptide chain release factor 1 [Shewanella baltica OS223] gi|166223601|sp|A3D0G1|RF1_SHEB5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790896|sp|B8E815|RF1_SHEB2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|125996149|gb|ABN60224.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella baltica OS155] gi|217499835|gb|ACK48028.1| peptide chain release factor 1 [Shewanella baltica OS223] Length = 363 Score = 219 bits (557), Expect = 7e-55, Method: Composition-based stats. Identities = 110/338 (32%), Positives = 178/338 (52%), Gaps = 9/338 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R + D + + + L +E L++ ++ K Q D E+ Sbjct: 9 LEGLLERNEEVMALLGDASVISDQDRFRALSKEYAQLEDVVAGFKAYQQAQVDLDSAKEM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + Q L D +A++E+ AGAGG E+ Sbjct: 69 LEEDDAEMREMAQEEMKAAKAKLEHLEDELQILLLPKDPDDDKNAFVEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE +++ E + ++GE G K + + G YG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAEANRWQIEIMSCNEGEHGGFKEVIMKVSGDGVYGKLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V V ++ I I+ +D ++DT+R+SGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRVHTSAVTVVVLHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV+CQ +RSQHKN+AQA ++L A++ LE +KR + ++ + G Sbjct: 249 THIPTGIVVECQDQRSQHKNRAQAMSVLAARIQALEDEKRRSAEE--STRRSLVASGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 ++R+Y P V + R N+ ++V++GDLD + Sbjct: 307 ERVRTYNF-PQGRVSEHRINLTLYRLNEVMEGDLDAIL 343 >gi|307299656|ref|ZP_07579452.1| peptide chain release factor 1 [Thermotogales bacterium mesG1.Ag.4.2] gi|306914708|gb|EFN45098.1| peptide chain release factor 1 [Thermotogales bacterium mesG1.Ag.4.2] Length = 360 Score = 218 bits (556), Expect = 7e-55, Method: Composition-based stats. Identities = 116/351 (33%), Positives = 175/351 (49%), Gaps = 11/351 (3%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 LG + + +R + + P + + + ++ L I+ EI + Sbjct: 2 DLGKIMEV--FRERFKEVEKELSKPEVASDPDKLMEYGKKHAELSEIINLYSEIDSMKGE 59 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA--DSNDAYLEVHAGAG 126 E+ ++ + + L D + +E+ AG G Sbjct: 60 LEEWHEMKATAEENEQEVIANTISDLENRIARKELNLKGLLVPDLADERNIIIEIRAGTG 119 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L RMYTR+AE+ +K+E ++ ++ + G K I+G + + LK E G Sbjct: 120 GEEAALFAADLFRMYTRYAERNNWKSEIIDSNETDIGGFKEVIFQIRGRSVFSKLKYESG 179 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S R HTS +++ V P V ++ I +D RIDTYR+SGAGGQHVN T Sbjct: 180 VHRVQRVPTTESGGRIHTSTATVAVLPEVSETEVK-IDPADLRIDTYRSSGAGGQHVNKT 238 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRI H PTG+VV Q+ERSQH+NKA+A +LRA+LYE+ K I E+ +T+I Sbjct: 239 DSAVRIVHEPTGIVVAVQKERSQHQNKARALEILRARLYEMYSSK--AENEITEARRTQI 296 Query: 307 GWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 G G + IR+Y P V D R N V+DGDLD+ + A Sbjct: 297 GTGERSEKIRTYNF-PQNRVTDHRINFTSYRLLYVMDGDLDELVTELSAAD 346 >gi|163846312|ref|YP_001634356.1| peptide chain release factor 2 [Chloroflexus aurantiacus J-10-fl] gi|222524073|ref|YP_002568544.1| peptide chain release factor 2 [Chloroflexus sp. Y-400-fl] gi|163667601|gb|ABY33967.1| peptide chain release factor 2 [Chloroflexus aurantiacus J-10-fl] gi|222447952|gb|ACM52218.1| peptide chain release factor 2 [Chloroflexus sp. Y-400-fl] Length = 313 Score = 218 bits (556), Expect = 7e-55, Method: Composition-based stats. Identities = 146/308 (47%), Positives = 204/308 (66%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ L ++ +++ R+ L+ELA E D S+ + + +Q I+ EV ++ E Sbjct: 1 MQRLTRLKEEVTAWNDLERRIASAAELIELAELEGDESLTADLAAEVQAIQREVAQRELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LLSG D DA+L V AG GGT++QDWA MLLRMYTRWAE+R + +++ +GEEAGI Sbjct: 61 ILLSGPYDDRDAFLSVQAGMGGTDAQDWAAMLLRMYTRWAERRGYTVNLIDMSEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I+GP AYG+ + E GVHRL+R+SP+++ R TSF+ + V P VDD+ E+EI Sbjct: 121 KSATIEIRGPYAYGYARAEAGVHRLIRLSPFNAAHTRQTSFARVEVMPEVDDAPEVEIKP 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D RID +R+ G GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ +N+ A +LRA+L Sbjct: 181 EDLRIDVFRSGGHGGQGVNTTDSAVRITHLPTGIVVTCQNERSQIQNRELAMRVLRARLL 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E ELQ++ E E +G Q+R+Y L P +VKD RT+ E ++ VLDG++D Sbjct: 241 ERELQRQAEERARLRGEYREAAFGNQMRTYYLHPSTLVKDHRTDYETSNVQAVLDGEIDP 300 Query: 346 FMKATLAI 353 F++A L Sbjct: 301 FIEAFLRA 308 >gi|160872697|ref|ZP_02062829.1| peptide chain release factor 1 [Rickettsiella grylli] gi|159121496|gb|EDP46834.1| peptide chain release factor 1 [Rickettsiella grylli] Length = 363 Score = 218 bits (556), Expect = 7e-55, Method: Composition-based stats. Identities = 106/338 (31%), Positives = 172/338 (50%), Gaps = 9/338 (2%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 VQR L + + ++ + L +E L + ++ Q L + Sbjct: 12 IVQRYEELTALLANIEVIKDQNHFRNLSKEYVQLGPLVQCFQQYQTNLDRLNQAEHCLKD 71 Query: 79 EDDCSILQETSDNLQRIKL---EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D + + + + L D + +LE+ A AGG E+ +A Sbjct: 72 KDAIVQELAMEEMKIAQQKKIELEKELEHLLLPQDPNDDRNVFLEIRAAAGGDEAAIFAG 131 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY+R+AE + + E + + E+ G K I G Y LK E G HR+ R+ Sbjct: 132 DLFRMYSRYAESQHWHVEIIHRNPSEQGGYKEIIARISGTKVYAHLKFESGAHRVQRVPE 191 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 ++ R HTS ++ + P ++ +I + SD +IDT+RASGAGGQHV TDSA+RITH+ Sbjct: 192 TEAQGRVHTSTCTVAILPEIESMDDITLHPSDLKIDTFRASGAGGQHVQKTDSAIRITHL 251 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 P+G+VV+CQ ERSQHKN+A+A ++L+AKL L QK ++ E+ + +G G +I Sbjct: 252 PSGLVVECQDERSQHKNRARAMSLLQAKL--LAAQKAKQRREEAETRRDLVGTGDRSERI 309 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 R+Y P + D R N+ SD+++G L+ +++ Sbjct: 310 RTYNF-PQGRLTDHRINLTLYQLSDIMEGHLEPVIQSL 346 >gi|313158318|gb|EFR57720.1| peptide chain release factor 1 [Alistipes sp. HGB5] Length = 361 Score = 218 bits (556), Expect = 7e-55, Method: Composition-based stats. Identities = 108/346 (31%), Positives = 171/346 (49%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + K DP + +V + L +E + L+ I + + L + ++ Sbjct: 10 LDGLKLKYEETGQKLTDPEVIADVKQFVQLNKEYKELEPIIETSERYRTALANLAEAKDI 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 + D + + + ++ +E + + DS +A +E+ G GG E+ Sbjct: 70 LANDKDEEMREMARGEITELEPAIEQMEEQIKLLLIPKDPQDSKNAIMEIRGGTGGDEAA 129 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMYT++ E + ++ E DG G K L + G N YG LK E GVHR+ Sbjct: 130 IFAGDLLRMYTKYIESKGWRYEMTSFSDGAAGGYKEVVLKVTGQNVYGTLKYESGVHRVQ 189 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +S+ V P ++ IS +D R D + ASG GGQ VNTT SA+R Sbjct: 190 RVPQTETQGRVHTSAASVAVLPEAEEFDVE-ISMNDIRKDIFCASGPGGQSVNTTYSAIR 248 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +THIPTG+VVQCQ ++SQ KN +A+ LR +++ LE K + I KT + G + Sbjct: 249 LTHIPTGIVVQCQDQKSQLKNFDKAFEELRTRVFNLEYSKYLDE--IASKRKTMVSTGDR 306 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P + D R N + S +DGD+ D + + + Sbjct: 307 SAKIRTYNY-PQGRITDHRINYTIYNLSAFMDGDIQDVIDHLIVAE 351 >gi|327481907|gb|AEA85217.1| peptide chain release factor 1 [Pseudomonas stutzeri DSM 4166] Length = 360 Score = 218 bits (556), Expect = 7e-55, Method: Composition-based stats. Identities = 117/342 (34%), Positives = 172/342 (50%), Gaps = 9/342 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + RE ++ I +++ D L Sbjct: 9 LDILQDRFEELTALLGDAEVISDQNRFRAYSREYAEVEPVIVAYRQLCKVQQDLEGAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRI---KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + + Q L D + +LE+ AG GG E+ Sbjct: 69 LKDSDPDMREMAEEEVAEAKAQLETLEANLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AEK+ ++ E L +GE G K ++G N Y LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAEKQGWRVEILSESEGEHGGYKEVISRVEGDNVYAKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V P D+ +EI+ +D RIDTYR+SGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQAAVEINPADLRIDTYRSSGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV+CQ+ERSQHKN+A+A L AKL + Q I E+ K +G G Sbjct: 249 THLPTGIVVECQEERSQHKNRAKALAWLAAKLQD--RQDAAAHKEISETRKLLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R N+ S ++V+ G ++ ++ L Sbjct: 307 ERIRTYNF-PQGRVTDHRVNLTLYSLNEVIGGAVEQVIEPLL 347 >gi|114330834|ref|YP_747056.1| peptide chain release factor 1 [Nitrosomonas eutropha C91] gi|122314234|sp|Q0AHU1|RF1_NITEC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|114307848|gb|ABI59091.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrosomonas eutropha C91] Length = 359 Score = 218 bits (556), Expect = 7e-55, Method: Composition-based stats. Identities = 115/350 (32%), Positives = 183/350 (52%), Gaps = 8/350 (2%) Query: 11 GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 G+ D RL L+ + + ++ + L RER ++ F Q D Sbjct: 3 KGIVDQLTRLSIRLEELDKLLSNEKITADLDNYRKLSRERSEIEPVTRFYHTYQQVEQDL 62 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGT 128 +E++++ + D ++ ++E + + L D + +LE+ AG GG Sbjct: 63 ATAMEMSVDPQFRDFAEAEIDADKQKLADIETEILKQLLPRDPNDERNIFLEIRAGTGGD 122 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 ES +A L RMY+R+AE+ ++ E + + E G K I G AY LK E G H Sbjct: 123 ESALFAGDLFRMYSRYAEREGWQVEIVSQNPSEVGGYKEIIARIIGHGAYSRLKFESGAH 182 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ ++ R HTS ++ V P D+ + ++ +D RIDT+RASGAGGQH+N TDS Sbjct: 183 RVQRVPATETQGRVHTSTCTVAVLPEADEISGVTLNPADLRIDTFRASGAGGQHINKTDS 242 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PTG+V +CQ+ RSQHKNKAQA ++L +++ L+ Q R + A + K+ +G Sbjct: 243 AVRITHLPTGIVAECQEGRSQHKNKAQAMSVLISRI--LDKQVRAQQAEQAAARKSLVGS 300 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P + D R N+ ++DG+LD+ A + Sbjct: 301 GERSERIRTYNF-PQGRITDHRINLTLYKIEQIMDGELDELCSTLAAEHQ 349 >gi|125975076|ref|YP_001038986.1| peptide chain release factor 1 [Clostridium thermocellum ATCC 27405] gi|256003270|ref|ZP_05428262.1| peptide chain release factor 1 [Clostridium thermocellum DSM 2360] gi|281418506|ref|ZP_06249525.1| peptide chain release factor 1 [Clostridium thermocellum JW20] gi|166223552|sp|A3DIL4|RF1_CLOTH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|125715301|gb|ABN53793.1| bacterial peptide chain release factor 1 (bRF-1) [Clostridium thermocellum ATCC 27405] gi|255992961|gb|EEU03051.1| peptide chain release factor 1 [Clostridium thermocellum DSM 2360] gi|281407590|gb|EFB37849.1| peptide chain release factor 1 [Clostridium thermocellum JW20] gi|316939241|gb|ADU73275.1| peptide chain release factor 1 [Clostridium thermocellum DSM 1313] Length = 360 Score = 218 bits (556), Expect = 7e-55, Method: Composition-based stats. Identities = 120/330 (36%), Positives = 181/330 (54%), Gaps = 12/330 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + A R +N + DP + N E K LM+E L+ ++ E + + Sbjct: 1 MFEKFQAAENRYDEINHRLSDPAVIANQDEYKKLMKEHAELEVLVTKYNEYKKLTKEIAD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGG 127 E+ E+ D + L+ + + + + L D + +E+ GAGG Sbjct: 61 AKEMLNEKLDKEFREMVETELKEAQEKLEVLKKEMKILLLPKDPNDERNVIVEIRGGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR+AE+ +KTE L+ + E G K I+G AY LK E GV Sbjct: 121 DEAALFAGDLFRMYTRYAERNGWKTEILDSNPTEIGGFKEVVFSIEGNGAYSRLKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++N R HTS ++ V P + I++EI+ +D RIDTYRASGAGGQH+N TD Sbjct: 181 HRVQRVPVTEANGRVHTSTVTVAVLP-EAEEIDVEINPNDLRIDTYRASGAGGQHINKTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SA+RITH+PTG+VV CQ +RSQHKNK +A +LR+KLYE+ +++ I + K+++G Sbjct: 240 SAIRITHLPTGLVVCCQDQRSQHKNKEKAMKVLRSKLYEMAREQQ--HNEIAQERKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTS 334 G +IR+Y P V D R + Sbjct: 298 TGDRSERIRTYNF-PQGRVTDHRIGLTLYK 326 >gi|288554407|ref|YP_003426342.1| peptide chain release factor 1 [Bacillus pseudofirmus OF4] gi|288545567|gb|ADC49450.1| peptide chain release factor 1 [Bacillus pseudofirmus OF4] Length = 356 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 108/351 (30%), Positives = 177/351 (50%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + R + LN DP + + + + +E+ ++ + +E ++ + Sbjct: 1 MLDRLQSVEDRYNRLNELLSDPDIISDSKKLREFSKEQSDIEETVQAYREYKEVVSQYKD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 + ++ D + + + + E + L D + +E+ AGG Sbjct: 61 AKAMLEDKLDDEMYAMVKEEMDELSTRQEELEARLKILLLPKDPNDDKNVIVEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+Q +A L +MY+R+AE + +KTE +E E G K + G AY LK E G Sbjct: 121 DEAQLFAGDLYKMYSRFAEAQGWKTEVIEATSTELGGYKEIIFSVNGAGAYSKLKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +E+EI E D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPQTESGGRIHTSTATVAVLP-EAEEVEVEIHEKDIRVDTFTSSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG VV CQ E+SQ KNK +A +LRA++Y+ +RE A ++ K +G Sbjct: 240 SAVRLTHLPTGTVVSCQDEKSQIKNKEKAMKVLRARVYDKV--QREVQAEYDQNRKLAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L G LD+ + A + ++ Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTIQKLEQILQGKLDEVIDALIVEEQ 347 >gi|116511384|ref|YP_808600.1| peptide chain release factor 1 [Lactococcus lactis subsp. cremoris SK11] gi|123125765|sp|Q031E4|RF1_LACLS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|116107038|gb|ABJ72178.1| bacterial peptide chain release factor 1 (bRF-1) [Lactococcus lactis subsp. cremoris SK11] Length = 357 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 102/352 (28%), Positives = 176/352 (50%), Gaps = 13/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---D 68 +FD ++ V R L DP + + L RE L + ++ E + L D Sbjct: 1 MFDQLESIVGRYEELGELLSDPEVVSDTKRFMELSREEADLRDKVATYNEYKKVLETISD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAG 126 + +L +D+ + + + + + EV ++ + LL + + + LE+ AG Sbjct: 61 SEEMLGEGGLDDEMKEMLKEELSSAKSQKEVLEEEIKILLLPKDPNDGKNIILEIRGAAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A LL MY ++E + +K E +E + G K + LI GP+ Y LK E G Sbjct: 121 GDEAALFAGDLLNMYQHFSESQGWKFEIMEANITGIGGYKEVSALISGPSVYSKLKYESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ ++ R HTS +++ V P V++ I + D R+D Y ASGAGGQ+VN Sbjct: 181 AHRVQRVPVTETQGRVHTSTATVLVMPEVEEFEMT-IEQKDLRVDIYHASGAGGQNVNKV 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +AVR+ H+PTG+ V+ Q+ER+Q KN+ +A +L K+++ ++ E+ K+ + Sbjct: 240 ATAVRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYY--QQIELDKQNAERKSTV 297 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R + +L G +D+ + A + + Sbjct: 298 GTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKMDEVIDALIVYDQ 348 >gi|288819151|ref|YP_003433499.1| peptide chain release factor 1 [Hydrogenobacter thermophilus TK-6] gi|288788551|dbj|BAI70298.1| peptide chain release factor 1 [Hydrogenobacter thermophilus TK-6] gi|308752735|gb|ADO46218.1| peptide chain release factor 1 [Hydrogenobacter thermophilus TK-6] Length = 357 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 110/340 (32%), Positives = 177/340 (52%), Gaps = 8/340 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + + + ++ + L ++ + + + + + D EL Sbjct: 10 LEAIEKRYEEIQNRLSSQDVIRDRAQFAKLSKDLKDIGEVVDLYRRYKKVQKDIKEAQEL 69 Query: 76 ALEEDDCSILQETS-DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + +E + + + + L E DS + LE+ AG GG E+ + Sbjct: 70 LKSREFEELAKEEIKRLKREEERIEKELKILMLPKDERDSRNVILEIRAGVGGEEAALFV 129 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LL MY ++AE+R +K L + G K LI+G AY LK E GVHR+ RI Sbjct: 130 ADLLNMYQKYAEERGWKFSILSANRTGLGGYKEVIALIEGVGAYSRLKYESGVHRVQRIP 189 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P VD++ I+ D +I+T+RASGAGGQ+VNTT++AVR+TH Sbjct: 190 RTESGGRIHTSTATVAVLPEVDETELE-INPQDLKIETFRASGAGGQYVNTTETAVRVTH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+ V CQ ERSQ +NK +A +L A+L + +++EE I + K ++G G + Sbjct: 249 IPTGISVACQDERSQFQNKQKALKILYARLKDFYERQKEEE--IAKERKMQVGTGERSEK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IR+Y P V D R N+ DVL+G LD+ ++A + Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKLHDVLEGKLDEIIEALI 345 >gi|313678949|ref|YP_004056688.1| bacterial peptide chain release factor 1 (brf-1) [Oceanithermus profundus DSM 14977] gi|313151664|gb|ADR35515.1| bacterial peptide chain release factor 1 (bRF-1) [Oceanithermus profundus DSM 14977] Length = 358 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 110/348 (31%), Positives = 176/348 (50%), Gaps = 9/348 (2%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + L + DP + + + R L I + + + Sbjct: 1 MLDKLKKLEEEYRALERELGDPEVLADAARFREKSRRYAELGEVIEAFRAYRRVQDELEQ 60 Query: 72 LLELALEED-DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 ELA + + +E ++ +++ + + L AD +A +E+ AG GG E+ Sbjct: 61 ARELAADPELGEMAREEAAELEEKLGELEKKLELLLLPRDPADVRNAIVEIRAGTGGQEA 120 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L MYTR+AE+ ++ E LE H + G + ++KGP AYG K E GVHR+ Sbjct: 121 ALFAGNLFEMYTRYAERLGYQVEMLESHPTDLGGFSKVSFMVKGPGAYGTFKYESGVHRV 180 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P ++S + S+ RID RASG GGQ VNTTDSAV Sbjct: 181 QRVPATETQGRIHTSTATVAVLPEAEESDVE-LDMSEVRIDVMRASGPGGQGVNTTDSAV 239 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+ H PTG+++ Q RSQ KN+ +A ++LR++L LE+++ EE A + S +IG G Sbjct: 240 RVVHEPTGIIITIQDSRSQIKNREKALSILRSRL--LEMKRAEEEAALRTSRLAQIGTGE 297 Query: 311 Q---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + IR+Y P V D R + + VL G+LD+ +A + Sbjct: 298 RSEKIRTYNF-PQSRVTDHRIHFTTHNLEGVLAGELDELTEALKKADQ 344 >gi|269123393|ref|YP_003305970.1| peptide chain release factor 1 [Streptobacillus moniliformis DSM 12112] gi|268314719|gb|ACZ01093.1| peptide chain release factor 1 [Streptobacillus moniliformis DSM 12112] Length = 358 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 115/347 (33%), Positives = 182/347 (52%), Gaps = 10/347 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V++ +N + + + + + + + + E Sbjct: 5 LDEVVEKYEEINRLLMSQEVLSDPKKLMEYNKTLSQMSEIVEKYLLYKSKKEALEQYKEE 64 Query: 76 ALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D +L+ + + I E + L D + +E+ AGAGG E+ Sbjct: 65 VKSEKDEEMLEMLNMEIDTIEEEIPRLEEELKILLLPKDPNDEKNVIVELRAGAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + + + RM+TR+AE+ K+KTE ++ ++ G+K T LI G AY LK E GVHR+ Sbjct: 125 LFVSDIFRMFTRYAERNKWKTEIIDKNEIGVGGLKEITFLISGKGAYSRLKFESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +++ R HTS ++ V P +DD ++ I+ SD +IDTYR+SGAGGQHVNTTDSAVR Sbjct: 185 RVPDTEASGRIHTSTITVAVLPEIDDVEQVAINPSDLQIDTYRSSGAGGQHVNTTDSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH PTG+VV Q RSQ KNK A +L +KLYE+E++K+ +++ ++++G G Sbjct: 245 ITHKPTGIVVTSQDGRSQIKNKEAAMKVLASKLYEIEVEKQR--SSVEAERRSQVGTGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +LDG LD+ + A +A + Sbjct: 303 SEKIRTYNY-PQGRVTDHRIKLTLHRLDAILDGALDEIIDALIAFNQ 348 >gi|258406203|ref|YP_003198945.1| peptide chain release factor 1 [Desulfohalobium retbaense DSM 5692] gi|257798430|gb|ACV69367.1| peptide chain release factor 1 [Desulfohalobium retbaense DSM 5692] Length = 356 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 118/350 (33%), Positives = 183/350 (52%), Gaps = 11/350 (3%) Query: 13 LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL---CD 68 +F D+ +R + + + + Q+ L + L IS +E ++ L + Sbjct: 1 MFAKLDSIEERYAEIEQELSSSDVLQDQQRYAELAKAHADLGEIISVYREYKEVLTGIEE 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 N +L +E +E S R + Q L D + LE+ AG GG Sbjct: 61 NQDVLSDGDQELRELAKEELSALETRQEELHARLQKLLLPKDPMDDKNIILEIRAGTGGE 120 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ + LLRMYTR+AE +K E + H G+K I G + Y LK E GVH Sbjct: 121 EAALFVADLLRMYTRYAETMHWKVELMNSHPTGSGGMKEVIASISGASVYSRLKYESGVH 180 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS ++ + P + +++EI S+ RID +RASG GGQ VNTTDS Sbjct: 181 RVQRVPSTESQGRIHTSAVTVAILP-EAEEVDVEIDPSELRIDYFRASGPGGQSVNTTDS 239 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITHIP+GVVV CQ E+SQHKNKA+A +LR+++ L+ ++ E + S ++++G Sbjct: 240 AVRITHIPSGVVVSCQDEKSQHKNKAKAMKVLRSRI--LKAKQEEAKKELDASRRSQVGS 297 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P + D R N+ S +VL G++D+ ++ + + Sbjct: 298 GDRSERIRTYNF-PQGRITDHRINLTLYSLENVLAGNMDEVIEPLVQHDQ 346 >gi|78185965|ref|YP_374008.1| peptide chain release factor 1 [Chlorobium luteolum DSM 273] gi|119361573|sp|Q3B6R6|RF1_PELLD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|78165867|gb|ABB22965.1| bacterial peptide chain release factor 1 (bRF-1) [Chlorobium luteolum DSM 273] Length = 358 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 106/352 (30%), Positives = 173/352 (49%), Gaps = 13/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + +R L DP + + L +E L + Sbjct: 1 MFDKLQSIKERHLDLERMLADPAAAGDQTRFRRLNKEYSDLKEIVQAYDRYASARQQLEE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 + E+D + + + ++ + + L EADS + +E+ AG GG Sbjct: 61 SRHMQKAEEDPEMKAMAREEMLELEERIPGLEQELRILLLPKDEADSRNVIMEIRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDG-EEAGIKSATLLIKGPNAYGWLKGEQG 186 E+ +A L+RMY R+AE++ ++ E L+ ++ G + TL I G + YG LK E G Sbjct: 121 EEAALFAADLMRMYQRYAERQGWRCEVLDYNESSGPGGFREVTLTISGHDVYGTLKYESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ ++ R HTS +S+ V P + +++EI D R DTYR+ G GGQ+VN Sbjct: 181 VHRVQRVPETETQGRIHTSAASVAVLP-EAEEVDVEIRRDDLRFDTYRSGGKGGQNVNKV 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 ++AVRITH PTG+V CQ+ERSQ +NK +A ML AKLY+++LQ++++ +T + Sbjct: 240 ETAVRITHEPTGLVAACQEERSQLQNKERAMKMLMAKLYDIKLQEQQQERADM--RRTMV 297 Query: 307 GWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G + IR+Y P V D R + G++ + + A + Sbjct: 298 ASGDRSAKIRTYNY-PQSRVTDHRIGFTSHGLPHFMQGEIGELIDALKMHDQ 348 >gi|163787722|ref|ZP_02182169.1| peptide chain release factor 1 [Flavobacteriales bacterium ALC-1] gi|159877610|gb|EDP71667.1| peptide chain release factor 1 [Flavobacteriales bacterium ALC-1] Length = 358 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 95/346 (27%), Positives = 169/346 (48%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72 QR +N P + + LM+E + + KE D + + + Sbjct: 5 IQIIKQRFDEVNDLIIQPDIISDQKRYAKLMKEYKDFKLIVDKGAVYKEALDNVAEAEEI 64 Query: 73 LELALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 + +++ + + D I+ E +F + D+ + +EV AG GG E+ Sbjct: 65 ITDGSDDEMVEMAKMQLDEAKDTIEKLEEEIRFMLIPKDPDDAKNVVVEVRAGTGGDEAS 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+++ + ++ + + DG G K + G + YG LK E GVHR+ Sbjct: 125 IFAGDLFRMYSKYCSDKGWRVDVVSQSDGTSGGFKEVIFEVSGEDVYGTLKFEAGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P ++ E+ ++ RI+ ++G GGQ VNTT SA++ Sbjct: 185 RVPQTETQGRVHTSAATVMVLPEAEEFD-YELDMTEVRIERTTSTGPGGQSVNTTYSAIK 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 + H PTG++V CQ ++S HKN +A +LR++LYE EL KR+ A E K+ + G + Sbjct: 244 LHHEPTGMIVSCQDQKSSHKNLEKALKVLRSRLYERELAKRQ--AADSEKRKSMVSSGDR 301 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P V D R + +++++GD+ + + + Sbjct: 302 SAKIRTYNY-PQGRVTDHRIGLTLYDLTNIINGDIQKIIDELMLAE 346 >gi|254497857|ref|ZP_05110623.1| peptide chain release factor 1 [Legionella drancourtii LLAP12] gi|254352935|gb|EET11704.1| peptide chain release factor 1 [Legionella drancourtii LLAP12] Length = 351 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 114/338 (33%), Positives = 175/338 (51%), Gaps = 9/338 (2%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 ++R + + + + + K L +E L+ + + D + L E+ Sbjct: 1 MLERFQEVGRLLSEASVIADQNQFKALSKEYAQLEPVATCYETYLDAQNNLASLQEMLAG 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESL---LSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D + K E + D + YLEV AG GG E+ +A Sbjct: 61 DDQELATMAEDELEDAQKQIDELDEQLQWHLIPKDPDDERNIYLEVRAGTGGDEAAIFAG 120 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY+R+AE + ++ E + GE G K I G Y LK E G HR+ R+ Sbjct: 121 DLYRMYSRYAENQGWQLELISASHGEHGGYKEIIARISGNAVYSQLKFESGAHRVQRVPD 180 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS ++ V P V++ +I+I+ D RIDTYR+SGAGGQHVN TDSA+RITHI Sbjct: 181 TESQGRVHTSACTVAVMPEVEEIDDIQINTDDLRIDTYRSSGAGGQHVNKTDSAIRITHI 240 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTGVVV+CQ ERSQHKN+A+A ++L+ +L + E K+++ ++ K+ +G G +I Sbjct: 241 PTGVVVECQDERSQHKNRAKAMSLLKTRLLDAEQSKQKKEQ--AQTRKSLVGSGDRSERI 298 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 R+Y P + D R N+ DV++G+L ++ Sbjct: 299 RTYNY-PQGRLTDHRINLTIYQLGDVMEGNLALVVEPL 335 >gi|126725348|ref|ZP_01741190.1| peptide chain release factor 1 [Rhodobacterales bacterium HTCC2150] gi|126704552|gb|EBA03643.1| peptide chain release factor 1 [Rhodobacterales bacterium HTCC2150] Length = 421 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 119/342 (34%), Positives = 170/342 (49%), Gaps = 13/342 (3%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 R FL K L RE L I Q + D + Sbjct: 80 QITARFEFLEAKLASGE----TDNIVELSREYSELKPVADQIMAFQTLVQDIDAAEAMLD 135 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQDWANM 136 + + + E L+ + E LL + A +E+ G GG E+ +A Sbjct: 136 DPEMRELAAEELKELRDSLPDAENAIKLVLLPKDTADARPAIIEIRPGTGGDEAALFAGD 195 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 LLRMY R+AE +K E +E E GIK IKG N +G LK E GVHR+ R+ Sbjct: 196 LLRMYQRYAESNGWKFEIIEEQVSELGGIKEIIANIKGTNVFGKLKFESGVHRVQRVPTT 255 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S R HTS +++ V P + ++++I SD RIDT RASGAGGQHVNTTDSAVRITH+P Sbjct: 256 ESGGRIHTSAATVAVLP-EAEEVDLDIPASDLRIDTMRASGAGGQHVNTTDSAVRITHLP 314 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG++V E+SQH+N+ A ++R++LYE+E QK + K+++G G +IR Sbjct: 315 TGMIV-VSMEKSQHRNREIAMQVMRSRLYEMERQKVADER--AADRKSQVGSGDRSERIR 371 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +Y P + D R N+ V+ G+LD+ + A A + Sbjct: 372 TYNF-PQGRMTDHRINLTLYKLDQVMSGELDEIIDALHADDQ 412 >gi|28198320|ref|NP_778634.1| peptide chain release factor 2 [Xylella fastidiosa Temecula1] gi|71897686|ref|ZP_00679931.1| Peptide chain release factor 2 [Xylella fastidiosa Ann-1] gi|182680959|ref|YP_001829119.1| peptide chain release factor 2 [Xylella fastidiosa M23] gi|28056390|gb|AAO28283.1| peptide chain release factor 2 [Xylella fastidiosa Temecula1] gi|71732589|gb|EAO34642.1| Peptide chain release factor 2 [Xylella fastidiosa Ann-1] gi|182631069|gb|ACB91845.1| peptide chain release factor 2 [Xylella fastidiosa M23] gi|307579427|gb|ADN63396.1| peptide chain release factor 2 [Xylella fastidiosa subsp. fastidiosa GB514] Length = 302 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 159/290 (54%), Positives = 216/290 (74%), Gaps = 1/290 (0%) Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + + + L+LA E D +LQ +++ +L+VE +F+ + SG+ D +A++++ A Sbjct: 3 NGVAEASEFLDLAEIEQDQEMLQAVLNDVDIYQLQVEKLEFQRMFSGKMDGANAFVDIQA 62 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+QDWA MLLRMY RWAE R +K E LE+ GE AGIKSAT ++G AYGWLK Sbjct: 63 GAGGTEAQDWAEMLLRMYLRWAEGRGWKAELLEVSGGEVAGIKSATFRVEGDFAYGWLKT 122 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS++RRHTSF+S++V P VDD+I+IEI+ +D + D YR+SGAGGQHV Sbjct: 123 ETGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDNIDIEINPADLKTDVYRSSGAGGQHV 182 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRITH+P+G+VV CQ ERSQH N+ +A ML AKLYE E+QKR ++ E+SK Sbjct: 183 NKTESAVRITHVPSGIVVACQTERSQHANRDRAMKMLAAKLYESEIQKRNAEKDVLEASK 242 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 ++IGWG QIR+YVL +KDLRT +E++ VLDGDLD+F++A+L Sbjct: 243 SDIGWGSQIRNYVLD-QSRIKDLRTGVERSDTQKVLDGDLDEFIEASLKA 291 >gi|315641825|ref|ZP_07896829.1| peptide chain release factor RF1 [Enterococcus italicus DSM 15952] gi|315482500|gb|EFU73039.1| peptide chain release factor RF1 [Enterococcus italicus DSM 15952] Length = 357 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 103/347 (29%), Positives = 172/347 (49%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72 R L DP + + L +E + ++ + + + D L Sbjct: 5 LQAIADRYEELGELLSDPAVVSDTKRFMELSKEEANTRETVATYRRYKEVVQGIADAEEL 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L L+ + + +E +L++ K +E + L D + +E+ AGG E+ Sbjct: 65 LGENLDAEMAELAKEELSDLKKEKEVLEDTIKILLLPKDPNDDKNIIMEIRGAAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MY R+AE + ++ E ++ + G K ++I G N + LK E G HR+ Sbjct: 125 LFAGDLFNMYQRYAESQGWRVEVMDANITGIGGYKEVIMMITGDNVFSKLKYESGAHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + +E+++++ D R+D Y ASGAGGQHVN T SAVR Sbjct: 185 RVPSTESQGRIHTSTATVVVMP-EAEEVELDLADKDIRVDIYHASGAGGQHVNKTASAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q ERSQ KN+ +A +LRA++Y+ + E + + K+ +G G Sbjct: 244 LTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYD--QLQHEAQSEYDANRKSAVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIIDALVLYDQ 347 >gi|157148427|ref|YP_001455746.1| hypothetical protein CKO_04252 [Citrobacter koseri ATCC BAA-895] gi|157085632|gb|ABV15310.1| hypothetical protein CKO_04252 [Citrobacter koseri ATCC BAA-895] Length = 293 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 169/290 (58%), Positives = 206/290 (71%), Gaps = 1/290 (0%) Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ A Sbjct: 3 QGLEDVSGLLELAVEADDEETFNEAVAELDTLEEKLAQLEFRRMFSGEYDSADCYLDIQA 62 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIKS T+ I G AYGWL+ Sbjct: 63 GSGGTEAQDWASMLERMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKISGEYAYGWLRT 122 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHV Sbjct: 123 ETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHV 182 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K Sbjct: 183 NRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNK 242 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 ++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 243 SDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291 >gi|120600166|ref|YP_964740.1| peptide chain release factor 1 [Shewanella sp. W3-18-1] gi|146291906|ref|YP_001182330.1| peptide chain release factor 1 [Shewanella putrefaciens CN-32] gi|166223604|sp|A4Y3J8|RF1_SHEPC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223606|sp|A1RNE1|RF1_SHESW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|120560259|gb|ABM26186.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp. W3-18-1] gi|145563596|gb|ABP74531.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella putrefaciens CN-32] gi|319425197|gb|ADV53271.1| peptide chain release factor 1 [Shewanella putrefaciens 200] Length = 363 Score = 218 bits (556), Expect = 8e-55, Method: Composition-based stats. Identities = 110/346 (31%), Positives = 181/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R + D + + + L +E L+ ++ K Q D E+ Sbjct: 9 LEGLLERNEEVLALLGDASVIADQDRFRALSKEYSQLEEVVAGFKAYQQAQADLDSAKEM 68 Query: 76 ALEEDDCSILQETSDNLQRI---KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + + Q L D +A++E+ AGAGG E+ Sbjct: 69 LEEDDAEMREMAQEEMKAAKAELERLESELQILLLPKDPNDDTNAFIEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE +++ E + ++GE G K + + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAEANRWQMEVMSCNEGEHGGFKEIIVKVSGEGAYGKLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V V ++ I I+ +D ++DT+R+SGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRVHTSAVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV+CQ +RSQHKN+AQA ++L A++ +E +KR + ++ + G Sbjct: 249 THIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEE--STRRSLVASGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 ++R+Y P V + R N+ ++V++GDLD + + + Sbjct: 307 ERVRTYNF-PQGRVSEHRINLTLYRLNEVMEGDLDAILTPLMQEHQ 351 >gi|259418822|ref|ZP_05742739.1| peptide chain release factor 1 [Silicibacter sp. TrichCH4B] gi|259345044|gb|EEW56898.1| peptide chain release factor 1 [Silicibacter sp. TrichCH4B] Length = 444 Score = 218 bits (556), Expect = 9e-55, Method: Composition-based stats. Identities = 115/344 (33%), Positives = 175/344 (50%), Gaps = 13/344 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +QR +L D L +E L I+ + L D E+ Sbjct: 101 LEQILQRYQYLEAAMADGAGGD----IAKLAKEYSDLRPVAEQIRAYRQLLSDLAEAEEM 156 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D ++ +E L+ Q L EADS A LE+ G GG E+ +A Sbjct: 157 LADPDMKALAEEEIPTLKAALPEAEHALQLALLPKDEADSRAAILEIRPGTGGDEAALFA 216 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE + +K + +E E G+K I G + LK E GVHR+ R+ Sbjct: 217 GDLYRMYSRYAEAQGWKIDVIEEQVSELGGLKELVARINGDGVFARLKYESGVHRVQRVP 276 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P + ++I+I +D RIDT R+SGAGGQHVNTTDSAVRITH Sbjct: 277 VTESGGRIHTSAATVAVLP-EAEDVDIKIDANDLRIDTMRSSGAGGQHVNTTDSAVRITH 335 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV E+SQH+N+ A +L+ +LY+LE Q+ + +++G G + Sbjct: 336 LPTGLVVTSS-EKSQHRNREIAMQVLKTRLYDLERQRIDSER--SADRASQVGSGDRSER 392 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++ GDLD+ + A ++ + Sbjct: 393 IRTYNF-PQGRMSDHRINLTLYKLEQIMGGDLDEIIDALISEHQ 435 >gi|91202802|emb|CAJ72441.1| strong similarity to protein chain release factor 2 (RF-2) [Candidatus Kuenenia stuttgartiensis] Length = 316 Score = 218 bits (556), Expect = 9e-55, Method: Composition-based stats. Identities = 144/296 (48%), Positives = 205/296 (69%) Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 ++E+Q + L++L EE D E ++ ++E + ++L D +AY Sbjct: 3 LQELQKTYEEIEFLVDLMDEESDERTTAEIVGDIALFTQKLEKLELHTMLGEAHDHCNAY 62 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 L ++AGAGGTES DW +ML RMY+RWAEK ++ GEEAG+K T+LI+G Y Sbjct: 63 LSIYAGAGGTESCDWVSMLFRMYSRWAEKNGHTLSLIDSLAGEEAGLKRITVLIEGEYVY 122 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G LK E GVHRLVRISP+DSN+RRHTSF+++ V P +++ EIEI++++ ++DTYR+SGA Sbjct: 123 GHLKSEIGVHRLVRISPFDSNARRHTSFAAVDVLPEIEEEEEIEINDNELQVDTYRSSGA 182 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVN T SAVRITH+PTG+V+ CQ ERSQH+N+ +A NML+AK+Y+++ +++E + Sbjct: 183 GGQHVNKTSSAVRITHLPTGIVIACQSERSQHQNRRRAINMLKAKIYQIKEKEKERELSA 242 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K EI WG QIRSYVLQPY +VKDLRT E + +LDG+++ F++A L K Sbjct: 243 AYDEKGEIAWGNQIRSYVLQPYSLVKDLRTGKESGNTQAMLDGEIEGFIEAYLKWK 298 >gi|269468531|gb|EEZ80185.1| Protein chain release factor A [uncultured SUP05 cluster bacterium] Length = 363 Score = 218 bits (556), Expect = 9e-55, Method: Composition-based stats. Identities = 114/346 (32%), Positives = 184/346 (53%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + RL + DP + + + + L E L ++ D E+ Sbjct: 9 LEQLSMRLEEVGALLSDPDVAADQNKFRELSIEHAQLTPINEQFEKYLSTQKDIESSEEM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 LE+D+ + + + + L DS + +E+ AG GG E+ Sbjct: 69 LLEDDEEIKTMAKEEITEGKEKLEYLDLELKKALLPKDPNDSRNIIIEIRAGTGGDEASI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+ EK+K++ EA+ + G+ G K I G N Y LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYVEKQKWQMEAMSSNIGDHGGFKEVIARISGTNVYSKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ + P V++ E++I+ SD RIDT+RASGAGGQHVN TDSAVR+ Sbjct: 189 VPETESQGRVHTSACTVAIMPEVENIEEVDINMSDVRIDTFRASGAGGQHVNKTDSAVRV 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR-- 310 THIPTG VV+CQ RSQHKNKAQA ++L +++ + + Q++++ + + K IG G Sbjct: 249 THIPTGTVVECQDGRSQHKNKAQALSVLASRILDAQQQEQQKEQAL--TRKELIGSGDRS 306 Query: 311 -QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ ++V++GDL+ ++ + ++ Sbjct: 307 QRIRTYNY-PQGRITDHRINLTLYKLAEVMEGDLEAIIEPLIVEQQ 351 >gi|51891274|ref|YP_073965.1| peptide chain release factor 2 [Symbiobacterium thermophilum IAM 14863] gi|51854963|dbj|BAD39121.1| peptide chain release factor 2 [Symbiobacterium thermophilum IAM 14863] Length = 308 Score = 218 bits (556), Expect = 9e-55, Method: Composition-based stats. Identities = 151/300 (50%), Positives = 211/300 (70%), Gaps = 1/300 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + ++ + RL D ++++LA E D + E ++ +V + + LL+G+ D+ Sbjct: 1 MEQLESFRRRLDDLEVMIDLAEEASDAEMAAEARAEADALEEQVRQFELQVLLNGKYDAY 60 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 +A L +HAGAGGTE+QDWA MLLRMY RWAE+R FK E L+ DG+EAGIKS T+ ++GP Sbjct: 61 NAILTIHAGAGGTEAQDWAEMLLRMYVRWAERRGFKVEELDRLDGDEAGIKSVTIAVRGP 120 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYR 234 AYG+L+ E GVHRLVRISP+D++ RRHTSF+++ V P ++D +IEI D RIDT+R Sbjct: 121 YAYGFLRPEMGVHRLVRISPFDASGRRHTSFAAVEVMPEIEDDVDDIEIRPEDLRIDTFR 180 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 +SGAGGQHVN T+SAVRITH+PTG+VV CQQERSQ +N+A A MLR+KL EL+++++ + Sbjct: 181 SSGAGGQHVNKTESAVRITHLPTGIVVSCQQERSQMQNRAVAMMMLRSKLVELKIEEQNK 240 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EI WG QIRSYV QPY +VKD R+ +E + V+DG+LD F+ L + Sbjct: 241 EMAQIRGPQMEIAWGSQIRSYVFQPYTLVKDHRSGVEVGNAQAVIDGELDPFIYGYLEKR 300 >gi|332885310|gb|EGK05561.1| peptide chain release factor 1 [Dysgonomonas mossii DSM 22836] Length = 361 Score = 218 bits (556), Expect = 9e-55, Method: Composition-based stats. Identities = 101/346 (29%), Positives = 170/346 (49%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R + DP + ++ L +E + L+ +E + L + Sbjct: 10 LDALNIRFEEIGKLITDPAVIADMKRYVKLNKEYRDLEKIDIARREYKQLLATIEEAKGI 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 EDD + + + + + + F + + DS +A +E+ G GG E+ Sbjct: 70 LENEDDSELREIAKEEMDAANERMPKLEEEIKFLLVPADPQDSKNAIMEIRGGTGGDEAA 129 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY ++ E + +KTE + +G G K + G YG LK E GVHR+ Sbjct: 130 IFAGDLYRMYQKYCEIKGWKTEITSVTEGTSGGFKEIIFTVTGEGVYGILKYESGVHRVQ 189 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P + ++++I+ +D + T R+SGAGGQ+VN ++ V+ Sbjct: 190 RVPATETQGRVHTSAATVAVLP-EAEEVDVDINPADIEMQTARSSGAGGQNVNKVETKVQ 248 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +TH P+G+VV CQQ RSQ N+ A MLR KLY++EL K + I KT + G + Sbjct: 249 LTHKPSGLVVVCQQSRSQLANRELAMQMLRTKLYDIELSKYMD--AIASKRKTMVSTGDR 306 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P + D R N+ + S V+DG++ + + + Sbjct: 307 SAKIRTYNY-PQGRMTDHRINLTMYNLSAVMDGEIQPIIDQLIIAE 351 >gi|145218953|ref|YP_001129662.1| peptide chain release factor 1 [Prosthecochloris vibrioformis DSM 265] gi|189039984|sp|A4SCF1|RF1_PROVI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|145205117|gb|ABP36160.1| bacterial peptide chain release factor 1 (bRF-1) [Chlorobium phaeovibrioides DSM 265] Length = 357 Score = 218 bits (556), Expect = 9e-55, Method: Composition-based stats. Identities = 104/352 (29%), Positives = 177/352 (50%), Gaps = 13/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + +R L DP + + L +E L + Sbjct: 1 MFDNLQSIKERHLDLERLLADPDAAGDQTRFRKLNKEYSDLREIVETYDRYSHIKKQLED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127 +L E D + + ++ ++ ++ + E EADS + LE+ AG GG Sbjct: 61 SRQLLKNEQDQEMKALVEEEIEELQRQIPALEQEIKVLLLPKDEADSRNVILEIRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNAYGWLKGEQG 186 E+ + L RMY R+AEK+ + + L+ ++ G + AT+ I G + +G +K E G Sbjct: 121 EEAALFTTDLFRMYQRYAEKQGWNFQMLDYNESSVPGGFREATISITGHDVFGTMKYESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ ++ R HTS +S+ V P + +++EI + D R+DTYR+ G GGQ+VN Sbjct: 181 VHRVQRVPDTETQGRIHTSAASVAVLP-EAEEVDVEIRKEDLRLDTYRSGGKGGQNVNKV 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 ++AVRITH+PTG+V CQ+ERSQ +NK +A MLRAKL++++L ++++ +T + Sbjct: 240 ETAVRITHMPTGMVAACQEERSQLQNKERAMKMLRAKLFDIQLAEQQQARADL--RRTMV 297 Query: 307 GWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G + IR+Y P V D R + + G++ + + A + Sbjct: 298 ATGDRSAKIRTYNY-PQSRVTDHRIGFTTHALPQFMQGEIGELIDALKMHDQ 348 >gi|258544629|ref|ZP_05704863.1| peptide chain release factor 1 [Cardiobacterium hominis ATCC 15826] gi|258520137|gb|EEV88996.1| peptide chain release factor 1 [Cardiobacterium hominis ATCC 15826] Length = 360 Score = 218 bits (555), Expect = 9e-55, Method: Composition-based stats. Identities = 117/341 (34%), Positives = 176/341 (51%), Gaps = 11/341 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLIL 72 + +R LN P + + + +E L I+ + + ++ +L D L Sbjct: 9 LASLRERYDELNGLLALPETAADPDQLRRYAQEHAQLAPVIAILDDTEALERQLADLADL 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + + + + + + D D YLE+ AG GG E+ Sbjct: 69 ETDPEMAELAAAERPALEAQIAANEHQLARHM--IPKDPLDGADIYLEIRAGTGGDEAAI 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY ++AE++ +K E L + GE G K I G N Y LK E G HR+ R Sbjct: 127 FAGDLFRMYGKYAEQKNWKIEILSENPGEHGGYKEIISQISGNNVYSTLKYESGAHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS +++ + PV DD IEI+ +D ++DTYRASGAGGQHVN TDSA+RI Sbjct: 187 VPETESGGRIHTSAATVAILPVGDDIQPIEINPADLKVDTYRASGAGGQHVNKTDSAIRI 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+P+G+VV+CQ+ERSQHKN+A+A +L A+L ++E K K+ +G G Sbjct: 247 THLPSGIVVECQEERSQHKNRAKAMRLLAARLLDVERTK--AQNEQAAERKSLVGSGDRS 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R N+ S +D+L+G LD + Sbjct: 305 ERIRTYNY-PQSRVTDHRINLTLYSLADILEGGLDAIITPL 344 >gi|24375323|ref|NP_719366.1| peptide chain release factor 1 [Shewanella oneidensis MR-1] gi|32171552|sp|Q8EAR3|RF1_SHEON RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|24350136|gb|AAN56810.1|AE015816_7 peptide chain release factor 1 [Shewanella oneidensis MR-1] Length = 363 Score = 218 bits (555), Expect = 9e-55, Method: Composition-based stats. Identities = 110/346 (31%), Positives = 182/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R + D + + + L +E L+ ++ K Q D E+ Sbjct: 9 LEGLLERNEEVLALLGDASVIADQDRFRALSKEYSQLEEVVAGFKAYQQAQADLESAKEM 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + ++ Q L D +A++E+ AGAGG E+ Sbjct: 69 LEEDDAEMREMAQEEIKAAKVELERLEAELQILLLPKDPNDDTNAFIEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE +++ E + ++GE G K + + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAEANRWQLEIMSSNEGEHGGFKEIIVKVSGEGAYGKLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V V ++ I I+ +D ++DT+R+SGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRVHTSAVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV+CQ +RSQHKN+AQA ++L A++ +E +KR + ++ + G Sbjct: 249 THIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEE--STRRSLVASGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 ++R+Y P V + R N+ ++V++GDLD + + + Sbjct: 307 ERVRTYNF-PQGRVSEHRINLTLYRLNEVMEGDLDAILGPLMQEHQ 351 >gi|304410657|ref|ZP_07392275.1| peptide chain release factor 1 [Shewanella baltica OS183] gi|304351141|gb|EFM15541.1| peptide chain release factor 1 [Shewanella baltica OS183] Length = 363 Score = 218 bits (555), Expect = 9e-55, Method: Composition-based stats. Identities = 110/338 (32%), Positives = 178/338 (52%), Gaps = 9/338 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R + D + + + L +E L++ ++ K Q D E+ Sbjct: 9 LEGLLERNEEVMALLGDASVISDQDRFRALSKEYAQLEDVVAGFKAYQQAQVDLDSAKEM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + Q L D +A++E+ AGAGG E+ Sbjct: 69 LEEDDAEMREMAQEEMKAAKAKLEHLEDELQILLLPKDPDDDKNAFVEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE +++ E + ++GE G K + + G YG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAEANRWQIEIMSCNEGEHGGFKEVIMKVSGDGVYGKLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V V ++ I I+ +D ++DT+R+SGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRVHTSAVTVVVLHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV+CQ +RSQHKN+AQA ++L A++ LE +KR + ++ + G Sbjct: 249 THIPTGIVVECQDQRSQHKNRAQAMSVLAARIQALEDEKRRSAEET--TRRSLVASGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 ++R+Y P V + R N+ ++V++GDLD + Sbjct: 307 ERVRTYNF-PQGRVSEHRINLTLYRLNEVMEGDLDAIL 343 >gi|117919221|ref|YP_868413.1| peptide chain release factor 1 [Shewanella sp. ANA-3] gi|166223605|sp|A0KT88|RF1_SHESA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|117611553|gb|ABK47007.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp. ANA-3] Length = 363 Score = 218 bits (555), Expect = 9e-55, Method: Composition-based stats. Identities = 110/346 (31%), Positives = 182/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R + D + + + L +E L+ ++ K Q D E+ Sbjct: 9 LEGLLERNEEVLALLGDASVIADQERFRALSKEYSQLEEVVAGFKAYQQAQADLESAKEM 68 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + ++ Q L D +A++E+ AGAGG E+ Sbjct: 69 LEEDDAEMREMAQEEIKAAKAELERLEAELQILLLPKDPNDDTNAFIEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE +++ E + ++GE G K + + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAEANRWQLEIMSSNEGEHGGFKEIIVKVSGEGAYGKLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V V ++ I I+ +D ++DT+R+SGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRVHTSAVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV+CQ +RSQHKN+AQA ++L A++ +E +KR + ++ + G Sbjct: 249 THIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEE--STRRSLVASGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 ++R+Y P V + R N+ ++V++GDLD + + + Sbjct: 307 ERVRTYNF-PQGRVSEHRINLTLYRLNEVMEGDLDAILGPLMQEHQ 351 >gi|300741300|ref|ZP_07071321.1| peptide chain release factor 1 [Rothia dentocariosa M567] gi|311113380|ref|YP_003984602.1| peptide chain release factor RF1 [Rothia dentocariosa ATCC 17931] gi|300380485|gb|EFJ77047.1| peptide chain release factor 1 [Rothia dentocariosa M567] gi|310944874|gb|ADP41168.1| peptide chain release factor RF1 [Rothia dentocariosa ATCC 17931] Length = 360 Score = 218 bits (555), Expect = 9e-55, Method: Composition-based stats. Identities = 114/350 (32%), Positives = 178/350 (50%), Gaps = 11/350 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + + L + DP + N +A+ + R L ++ + + D Sbjct: 1 MFESIQVLLDEHTELQEQLADPAVQANQGKARRVGRRYAELTGIVTAYNKYKSLADDLEA 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E+A E+ D + T + E + + D + LEV AGAGG E+ Sbjct: 61 AREMASEDPDFAAEIPTLEAELEEAQERLRRLL--IPRDPDDGRNVILEVKAGAGGDEAA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA------TLLIKGPNAYGWLKGEQ 185 +A LLRMY R+AE + +KTE + + G K A T + +K E Sbjct: 119 LFAGDLLRMYLRYAEHKGWKTEVISSTSTDVGGYKDAQIAIKGTSNEPAEGVWAHMKYEG 178 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ +S R HTS + + V+P VD+ EIEIS++D +ID YR+SG GGQ VNT Sbjct: 179 GVHRVQRVPATESQGRIHTSAAGVLVFPEVDEPEEIEISQNDLKIDVYRSSGPGGQSVNT 238 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITH+PTG+VV Q E+SQ +N+ A +LRA+L + ++ + +S+ Sbjct: 239 TDSAVRITHLPTGIVVAMQNEKSQLQNREAAMRVLRARLLAHQQEQIDAENAAHRASQVR 298 Query: 306 -IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +IR+Y P + D RT + + VLDGDLD +++ + + Sbjct: 299 TMDRSERIRTYNF-PENRIADHRTGYKAYNLDAVLDGDLDPVVQSAIEMD 347 >gi|85859385|ref|YP_461587.1| peptide chain release factor 2 [Syntrophus aciditrophicus SB] gi|85722476|gb|ABC77419.1| bacterial peptide Chain Release Factor 2 (RF-2) [Syntrophus aciditrophicus SB] Length = 279 Score = 218 bits (555), Expect = 9e-55, Method: Composition-based stats. Identities = 159/277 (57%), Positives = 209/277 (75%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +A EE+D L+ S++++ ++ V + + +L E D +A + +HAGAGGTE+QDW Sbjct: 1 MAKEENDEEALEAISNDIESLRKSVRESELKMMLGSEQDPMNAIVSIHAGAGGTEAQDWV 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 MLLRMY RWAEKR FKT ++ G+EAG+KS + I+G AYG+ K E G+HRLVRIS Sbjct: 61 EMLLRMYLRWAEKRGFKTTIIDYLPGDEAGVKSVSFTIEGEYAYGYAKAEIGIHRLVRIS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+D++SRRHTSF+S++VYP V+D I +EI E D RIDTYR++GAGGQHVN TDSAVRITH Sbjct: 121 PFDASSRRHTSFASVFVYPEVNDEIVVEIDEKDLRIDTYRSTGAGGQHVNKTDSAVRITH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 +PTG+VVQCQ ERSQHKNKA A LR++LYEL++Q++ E + +K +I WG QIRS Sbjct: 181 MPTGIVVQCQNERSQHKNKAMAMKYLRSRLYELKIQEQNEKLSEINKTKKDIAWGSQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 YVLQPY+MVKD RTNIE + VLDGD+DD ++A L Sbjct: 241 YVLQPYKMVKDHRTNIEIGNVGRVLDGDIDDLIEAYL 277 >gi|315023545|gb|EFT36549.1| Peptide chain release factor 1 [Riemerella anatipestifer RA-YM] Length = 362 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 99/346 (28%), Positives = 165/346 (47%), Gaps = 12/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + QR + + P + + L +E L + E L E+ Sbjct: 9 LEAIKQRYNEVADLIIQPDVISDQKRYSSLNKEYSDLGKIVRVFDEYSTALNAIKEADEI 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 + D ++ Q + + E AD + +E+ AG GG ES Sbjct: 69 IADGSDKDLVDLAKMEKQEAIDRIPSIEEELKYLLIPKDPADDKNVMVELRAGTGGDESA 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + + RMYT + + + +K E + ++ + G K + ++G YG +K E GVHR+ Sbjct: 129 IFVEDVYRMYTMYFKSKGWKHEVTDSNEASK-GYKELIMRVEGDGVYGIMKFESGVHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS ++ V P + +++EI+ +D + T R+ GAGGQ+VN ++ V+ Sbjct: 188 RVPETESQGRVHTSAITVAVLP-EAEEVDVEINPADIEMQTSRSGGAGGQNVNKVETKVQ 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +TH PTG+VV CQQ RSQ N+ A MLR KLY++ELQK + +I KT + G + Sbjct: 247 LTHKPTGIVVVCQQARSQLANRELAMEMLRTKLYDIELQKVQ--GDIAAQRKTMVSTGDR 304 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P V D R N + + ++GD+ + + A + + Sbjct: 305 SAKIRTYNY-PQGRVTDHRINKSIYNLDNFMNGDIQEMLDALIMAE 349 >gi|241765770|ref|ZP_04763713.1| peptide chain release factor 2 [Acidovorax delafieldii 2AN] gi|241364339|gb|EER59478.1| peptide chain release factor 2 [Acidovorax delafieldii 2AN] Length = 300 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 153/298 (51%), Positives = 212/298 (71%), Gaps = 1/298 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + + ++ L DN L E++ EE D + L +++ E+E +F + S EAD Sbjct: 2 VLTLDKLTRELADNAELYEMSKEEGDEAGLLTIEAETAKLRPEIEQLEFRRMFSNEADPL 61 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 + ++++ AGAGGTE+ DWA+MLLR Y ++AE++ FKT E G+ AGIKSAT+ ++G Sbjct: 62 NCFVDIQAGAGGTEACDWASMLLRQYLKYAERKGFKTTVEEETAGDVAGIKSATIKVEGE 121 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 AYG L+ E GVHRLVR SP+DS+ RHTSF+S++VYP +DDSI+I+I+ +D R DTYRA Sbjct: 122 YAYGLLRTETGVHRLVRKSPFDSSGGRHTSFASLFVYPEIDDSIQIDINPADVRTDTYRA 181 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQH+N TDSAVR+THIPTG+VVQCQ RSQH N+ AW LR++LY+ E++KR+E Sbjct: 182 SGAGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHGNRDIAWQRLRSRLYDHEMRKRQEE 241 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 E +KT++GWG QIRSYVL +KDLRT +E ++ VLDGDLD F++A+L Sbjct: 242 QQKLEDTKTDVGWGHQIRSYVLD-NSRIKDLRTGVEISATQKVLDGDLDAFIEASLKQ 298 >gi|297184082|gb|ADI20201.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11] Length = 360 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 110/346 (31%), Positives = 179/346 (51%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLIL 72 + QR + +N P + + L RE ++L + E+ R+ + + Sbjct: 7 LNVIFQRYNEVNDLIIQPDVISDSKRYVQLNREYKNLKPLVEVRSQYLELSSRIEEAKGV 66 Query: 73 LELALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L+ + D + + D + E + L D +A +E+ GAGG E Sbjct: 67 LKEEKDADFREMAKMELDELEPTFEALEEEVKLLLLPKDPEDDKNALVEIRQGAGGDEGA 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R+ E R +K L +++G G K + + G + YG LK E GVHR+ Sbjct: 127 IFAGDLFRMYQRYCEGRGWKVAVLTMNEGSSGGFKEVSFEVNGESVYGILKYESGVHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +S+ V P + +++++ D + DTYR+ GAGGQHVN T+SAVR Sbjct: 187 RVPATESQGRVHTSAASVVVLP-EAEEVDVDLDMKDVKKDTYRSQGAGGQHVNKTESAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +TH+PTG+VV+CQ RSQHKN QA +LR++++++E +K++E KT + G + Sbjct: 246 LTHLPTGIVVECQDGRSQHKNYEQALKVLRSRMFDMEFKKKQEEQ--AAQRKTMVSTGDR 303 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P V D R + + +DV++GD+ F+ + Sbjct: 304 SAKIRTYNY-PQGRVTDHRIGLTSYNLNDVVNGDIQKFIDELHMAE 348 >gi|145588324|ref|YP_001154921.1| peptide chain release factor 1 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189039983|sp|A4SV43|RF1_POLSQ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|145046730|gb|ABP33357.1| bacterial peptide chain release factor 1 (bRF-1) [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 359 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 112/344 (32%), Positives = 178/344 (51%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ RL+ LN+ +++ + L RE + + + D E+ Sbjct: 9 LDHLDTRLAELNSLLTSEEATKDMDAYRKLTREHSDIATVVEQFGLYKKAEADAQAAEEM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + E ++ Q L D + +LE+ AG GG ES +A Sbjct: 69 RKDPEMKDFADEEQKQAQATMEELEGALQKLLLPKDVNDERNVFLEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE++ +K E + + + G K L + G + Y LK E G HR+ R+ Sbjct: 129 GDLLRMYTRFAERQGWKVEVVNAAESDLGGYKEVVLRLVGQSVYSRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ ++I+ ++ RIDT+RASGAGGQH+N TDSAVRITH Sbjct: 189 QTETQGRIHTSACTVAVMPEADELEAVKINPAELRIDTFRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG VV+CQ +RSQH+N+ QA +L +++ + ++RE+ ++ K+ IG G + Sbjct: 249 IPTGTVVECQDDRSQHRNREQAMKVLVSRIMDA--REREKHQLEAQTRKSLIGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++DGD+DD A + + Sbjct: 307 IRTYNF-PQGRITDHRINLTLYKIDAMMDGDIDDLCNALASEHQ 349 >gi|88803826|ref|ZP_01119349.1| peptide chain release factor 1 [Polaribacter irgensii 23-P] gi|88780354|gb|EAR11536.1| peptide chain release factor 1 [Polaribacter irgensii 23-P] Length = 358 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 101/350 (28%), Positives = 172/350 (49%), Gaps = 12/350 (3%) Query: 13 LFDWDNA-VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D QR ++ P + LM+E + L N + E Q + + Sbjct: 1 MLDKIRIVKQRYDEVSDLIIQPATIMDQKRYAQLMKEYKDLGNVVEKGDEYQALIDNIEE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 E+ E D + + + + + F + + DS +A +E+ AG GG Sbjct: 61 AKEILAEGSDAEMNEMAKSEIDEANSRIPKLEEEIRFLLIPTDPEDSKNAVVELRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY+++ E + +K ++ +G G K + G + YG LK E GV Sbjct: 121 DEASIFAGDLFRMYSKYCESKGWKVATVDYSEGTNGGFKEIQFEVNGADVYGTLKFEAGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS ++ V+P ++ I+ D RID + +SG GGQ VNTT Sbjct: 181 HRVQRVPQTETQGRVHTSAATCMVFPEAEEFDVE-INPKDVRIDFFCSSGPGGQSVNTTY 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+V QCQ ++SQHKNK +A+ +LR++LY++EL K+ + + + Sbjct: 240 SAVRLTHVPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDMELAKKNAEDALKRG--SMVS 297 Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 G + IR+Y V D R + ++++GD+ + + + Sbjct: 298 SGDRSAKIRTYNYA-QGRVTDHRIGLSLYDLPNIMNGDIQRVIDELMLAE 346 >gi|153002121|ref|YP_001367802.1| peptide chain release factor 1 [Shewanella baltica OS185] gi|166223602|sp|A6WSF0|RF1_SHEB8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|151366739|gb|ABS09739.1| peptide chain release factor 1 [Shewanella baltica OS185] Length = 363 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 109/338 (32%), Positives = 178/338 (52%), Gaps = 9/338 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R + D + + + L +E L++ ++ K Q D E+ Sbjct: 9 LEGLLERNEEVMALLGDASVISDQDRFRALSKEYAQLEDVVAGFKAYQQAQADLDSAKEM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + Q L D +A++E+ AGAGG E+ Sbjct: 69 LEEDDAEMREMAQEEMKAAKAKLEHLEDELQILLLPKDPDDDKNAFVEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE +++ E + ++GE G K + + G YG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAEANRWQIEIMSCNEGEHGGFKEVIMKVSGEGVYGKLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V V ++ I I+ +D ++DT+R+SGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRVHTSAVTVVVLHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV+CQ +RSQHKN+AQA ++L A++ +E +KR + ++ + G Sbjct: 249 THIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEE--STRRSLVASGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 ++R+Y P V + R N+ ++V++GDLD + Sbjct: 307 ERVRTYNF-PQGRVSEHRINLTLYRLNEVMEGDLDAIL 343 >gi|312142772|ref|YP_003994218.1| peptide chain release factor 1 [Halanaerobium sp. 'sapolanicus'] gi|311903423|gb|ADQ13864.1| peptide chain release factor 1 [Halanaerobium sp. 'sapolanicus'] Length = 357 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 117/350 (33%), Positives = 184/350 (52%), Gaps = 15/350 (4%) Query: 13 LFDWD----NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 +FD D V + LN K DP + + + + L+++ L + KE ++ Sbjct: 1 MFDLDEKLDKLVDKYQDLNKKLSDPEVINDSSKYQKLLKKHAKLKKIVDKYKEYKEAKQG 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAG 124 E+ EDD + + ++ ++ E + L D + +E+ +G Sbjct: 61 IEDAEEMIEMEDDPEMQELAELEIEELQPTKEKLEEELPIMLLPDDPNDEKNVIVEIRSG 120 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG E+ +A L RMY+R++E + +K E + + G K ++G Y +LK E Sbjct: 121 AGGDEAALFAADLFRMYSRYSENQGWKVEVMNANLSGVGGYKEIIFTVEGSEVYKYLKYE 180 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ +S+ R HTS +++ V P + ++I+I +D RID YR+SG GGQ VN Sbjct: 181 SGVHRVQRVPSTESSGRIHTSTATVAVLP-EAEEVDIDIDPNDLRIDVYRSSGPGGQSVN 239 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVRITH PT + V CQ E+SQHKNKA+A +LRA++ E + E+ A E+ K+ Sbjct: 240 TTDSAVRITHEPTEITVSCQDEKSQHKNKAKAMRILRARV--QEKIESEKQAKRAEARKS 297 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++G G +IR+Y P V D R N+ +LDGDL + A + Sbjct: 298 QVGTGDRSEKIRTYNF-PQGRVSDHRINLTVHQLDKILDGDLAPVIDALI 346 >gi|264676913|ref|YP_003276819.1| peptide chain release factor 1 [Comamonas testosteroni CNB-2] gi|262207425|gb|ACY31523.1| peptide chain release factor 1 [Comamonas testosteroni CNB-2] Length = 359 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 115/339 (33%), Positives = 172/339 (50%), Gaps = 7/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + QRL L+ + ++ + + + RE + S D E+ Sbjct: 9 LERYAQRLQELDFLLSREDIMGDMKQYRTISREHADVTAIASRYTRYLQTEADIAAAREM 68 Query: 76 ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + QE + + + Q L D+ A++E+ AG GG ES +A Sbjct: 69 LDDPDMAEMAQEEIGSGEAELIKLEDELQRLLLPKDPDDARPAFVEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMYTR+A +K E + + E G K L I+G N YG L+ E G HR+ R+ Sbjct: 129 GDLTRMYTRYAANVGWKVEVMSASENEIGGYKEVVLRIEGDNVYGALRFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D++ I ++ +D RIDT+RASGAGGQH+N TDSAVR+ H Sbjct: 189 ATETQGRIHTSACTVAVMPEPDEAEAITLNPADLRIDTFRASGAGGQHINKTDSAVRVVH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+V +CQ RSQH NKA+A +L+A++ E E +R A K IG G + Sbjct: 249 LPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSER--AAKEAAMRKGLIGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P + D R N+ V++GDL D ++A Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYKLLAVMEGDLGDVIQAL 344 >gi|312112637|ref|YP_003990953.1| peptide chain release factor 1 [Geobacillus sp. Y4.1MC1] gi|311217738|gb|ADP76342.1| peptide chain release factor 1 [Geobacillus sp. Y4.1MC1] Length = 358 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 120/351 (34%), Positives = 186/351 (52%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68 +F+ + +R LN DP + + + + +E+ L+ + +E + +L D Sbjct: 1 MFERLEAVEERYEKLNQLLMDPEVINDPKKLRDYSKEQSDLEETVQTYREYKSVRKQLDD 60 Query: 69 NLILLELALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 +LE L+ + +++E D QR + + + L D + +E+ A AGG Sbjct: 61 AKAMLEEKLDPEMREMVKEEIDELEQRQEELINKLKILLLPKDPNDEKNVIMEIRAAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYTR+AE + +KTE +E G K I G AY LK E G Sbjct: 121 EEAALFAGDLYRMYTRYAESQGWKTEVIEASPTGLGGYKEIIFTINGKGAYSKLKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ P + IE+EI+E D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLP-EMEEIEVEINEKDIRVDTFASSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+VV CQ E+SQ KNK +A +LRA++Y+ ++E A ++ K +G Sbjct: 240 SAVRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLRARIYDKY--QQEARAEYDQTRKQAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + VLDG LD+ ++A + + Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQVLDGSLDEIIEALILDDQ 347 >gi|238763213|ref|ZP_04624178.1| Peptide chain release factor 2 [Yersinia kristensenii ATCC 33638] gi|238698486|gb|EEP91238.1| Peptide chain release factor 2 [Yersinia kristensenii ATCC 33638] Length = 289 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 166/288 (57%), Positives = 207/288 (71%), Gaps = 1/288 (0%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 + D LLELA+E DD E L + ++ +F + SGE DS + YL++ AG+ Sbjct: 1 MEDVTGLLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQAGS 60 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDWA+MLLRMY RWAE + FKTE +E DG+ AG+KSAT+ I G A+GWL+ E Sbjct: 61 GGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGDVAGLKSATIKIIGEYAFGWLRTET 120 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN Sbjct: 121 GVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNK 180 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE E+QK+ + E +K++ Sbjct: 181 TESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQMLEDNKSD 240 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 241 IGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 287 >gi|256390407|ref|YP_003111971.1| peptide chain release factor 1 [Catenulispora acidiphila DSM 44928] gi|256356633|gb|ACU70130.1| peptide chain release factor 1 [Catenulispora acidiphila DSM 44928] Length = 356 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 118/352 (33%), Positives = 176/352 (50%), Gaps = 16/352 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ D+ + + L T+ DP + + A+ L + L +E D Sbjct: 1 MFEVIDDLLAEYAELGTRLADPSVHADADVARKLGKRYAELGPIAETYREYTSVSDDITA 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EL+ E+ + E K + D + LE+ G GG ES Sbjct: 61 AEELSAEDPAFGEEIPGLQERRTALEERLQKLL--IPRDPMDEKNVILEIKGGEGGQESM 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG------PNAYGWLKGEQ 185 +A LLRMY R+AE++ +KTE LE + + G K + +KG + LK E Sbjct: 119 LFAGDLLRMYMRFAERQHWKTEILESTESDLGGYKDVQVAVKGRVNEAGEGVWARLKYEG 178 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ +S R HTS + + V P + +E+EI+ +D RID +R+SG GGQ VNT Sbjct: 179 GVHRVQRVPVTESQGRIHTSAAGVLVLP-EAEDVEVEINANDLRIDVFRSSGPGGQSVNT 237 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITH+PTGVVV CQ E+SQ +NK A +LRA+L L + + E ++ K++ Sbjct: 238 TDSAVRITHLPTGVVVSCQNEKSQLQNKESAMRILRARL--LAVAQEEADREASDTRKSQ 295 Query: 306 I---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 I +IR+Y P + D R + + VLDGDLD ++A + Sbjct: 296 IRTMDRSERIRTYNF-PENRISDHRVGYKSYNLDQVLDGDLDAVIQACVEAD 346 >gi|225012847|ref|ZP_03703280.1| peptide chain release factor 2 [Flavobacteria bacterium MS024-2A] gi|225002969|gb|EEG40946.1| peptide chain release factor 2 [Flavobacteria bacterium MS024-2A] Length = 314 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 145/307 (47%), Positives = 208/307 (67%), Gaps = 2/307 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M++ + L +S + I+ + D +L+E D ++ + +E +F Sbjct: 1 MKQLRTLKKWVSDYEIIKQGIDDLEVLMEFEKSGDAEAVEVNSQYESS--LELLEALEFR 58 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++LS E D A L++ AGAGGTES DWA ML+RMY W EK+ +K + L G+ AGI Sbjct: 59 NMLSDEGDDLSAVLQITAGAGGTESCDWAEMLMRMYLMWGEKQGYKIKELNHQAGDVAGI 118 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ TL ++G A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDSIEI IS Sbjct: 119 KTVTLELEGDFAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIVISP 178 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 SD +T RASGAGGQ+VN ++AVR+ H PTG++++ + RSQ +NK +A +LR++LY Sbjct: 179 SDYTWETMRASGAGGQNVNKVETAVRLRHHPTGIIIENSETRSQLENKNKAMQLLRSQLY 238 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+ELQK+ + E+SK +I WG QIR+YV+ PY++VKD+RT E T V++G +D Sbjct: 239 EIELQKKLSARDEIEASKKKIEWGSQIRNYVMHPYKLVKDVRTQHEVTDVDAVMNGQIDP 298 Query: 346 FMKATLA 352 F+KA L Sbjct: 299 FLKAYLM 305 >gi|86134218|ref|ZP_01052800.1| peptide chain release factor 1 [Polaribacter sp. MED152] gi|85821081|gb|EAQ42228.1| peptide chain release factor 1 [Polaribacter sp. MED152] Length = 358 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 99/343 (28%), Positives = 172/343 (50%), Gaps = 11/343 (3%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 QR ++ P + + LM+E + L + + E Q + + E+ + Sbjct: 8 VKQRYDEVSDLIIQPEIIMDQKRYAQLMKEYKDLGDVVKKGDEYQTLMNNIEEAKEIIAD 67 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 D + + ++ + + F + D+ +A +E+ AG GG E+ +A Sbjct: 68 GSDAEMTEMAKMQMEEANTRIPELEEEIKFLLIPKDPEDAKNAVVELRAGTGGDEASIFA 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMYT++ E + +K ++ +G G K + G + YG LK E GVHR+ R+ Sbjct: 128 GDLFRMYTKYCESKGWKVSTVDYSEGTNGGFKEIQFEVNGDDVYGILKFEAGVHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V+P ++ I+ D RID + +SG GGQ VNTT SAVR+TH Sbjct: 188 QTETQGRVHTSAATCMVFPEAEEFDVE-INPKDVRIDFFCSSGPGGQSVNTTYSAVRLTH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+V QCQ ++SQHKNK +A+ +LR++LY++EL K++ + + + G + Sbjct: 247 IPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDMELAKKQAEDALKRG--SMVSSGDRSAK 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y V D R + ++++GD+ + + + Sbjct: 305 IRTYNYA-QGRVTDHRIGLSLYDLPNIMNGDIQKIIDELMLAE 346 >gi|116491555|ref|YP_811099.1| peptide chain release factor 1 [Oenococcus oeni PSU-1] gi|290891160|ref|ZP_06554222.1| hypothetical protein AWRIB429_1612 [Oenococcus oeni AWRIB429] gi|116092280|gb|ABJ57434.1| bacterial peptide chain release factor 1 (bRF-1) [Oenococcus oeni PSU-1] gi|290479124|gb|EFD87786.1| hypothetical protein AWRIB429_1612 [Oenococcus oeni AWRIB429] Length = 357 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 102/345 (29%), Positives = 170/345 (49%), Gaps = 8/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 N V R LN DP + + + +E + + + Q + EL Sbjct: 8 IQNVVDRYDELNELLADPDVASDSGKYTRYAKELGEITPIVENYRRYQQLTNEINDDKEL 67 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ S+ ++ L+ + E + + D + +E+ GG E+ +A Sbjct: 68 LNDKEMASLAKKELSELEPEQSELSEKLRVLMIPKDPNDDKNIIMEIRGAVGGDEANLFA 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LL MY +A+ + + E ++ GE G K A + I G N Y LK E G HR+ R+ Sbjct: 128 GDLLNMYAHYAQSQNWSFEIVDQTVGEAGGFKEAVINISGENVYSKLKFESGAHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIE-ISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 ++ R HTS +++ V P +D I D R D YR+SGAGGQH+N T SAVR+ Sbjct: 188 VTETQGRVHTSTATVGVMPEFEDIDTEGLIDPKDVREDVYRSSGAGGQHINKTSSAVRLV 247 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H+PTG+ V+ Q++RSQ +N+++AW +LR+++Y+ Q+ E + +T+IG G Sbjct: 248 HLPTGIKVEMQEQRSQQQNRSKAWQILRSRVYDHFAQENRE--QYDQQRRTKIGSGDRSE 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N V++GDL++ + A + + Sbjct: 306 RIRTYNF-PQNRVTDHRINFTLNKLDKVINGDLEEIIDALIIADQ 349 >gi|221066286|ref|ZP_03542391.1| peptide chain release factor 2 [Comamonas testosteroni KF-1] gi|220711309|gb|EED66677.1| peptide chain release factor 2 [Comamonas testosteroni KF-1] Length = 299 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 156/296 (52%), Positives = 211/296 (71%), Gaps = 1/296 (0%) Query: 58 FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117 ++++ L DN+ L E++ EE D + L+ ++K +E +F + GEAD + Sbjct: 3 TLEKLTTELADNVELFEMSKEEGDDAGLETIEAETAKLKPLIEELEFRRMFGGEADPLNC 62 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 ++++ AGAGGTE+ DWA+MLLR Y ++AE++ FK E G+ AGIKSAT+ ++G A Sbjct: 63 FIDIQAGAGGTEACDWASMLLRQYLKYAERKGFKATVEEETPGDVAGIKSATIKVEGEYA 122 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 YG L+ E GVHRLVR SP+DS+ RHTSFSS++VYP +DDSIEI I+ SD R DTYRASG Sbjct: 123 YGLLRTETGVHRLVRKSPFDSSGGRHTSFSSLFVYPEIDDSIEININPSDVRTDTYRASG 182 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 AGGQH+N TDSAVR+THIPTG+VVQCQ RSQH N+ AW LR++LY+ E++KR E Sbjct: 183 AGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKRMEEQQ 242 Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 E +KT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 243 KLEDTKTDVGWGHQIRSYVLD-NSRIKDLRTNVEVSATQKVLDGDLDVFIEASLKQ 297 >gi|264679119|ref|YP_003279026.1| peptide chain release factor 2 [Comamonas testosteroni CNB-2] gi|262209632|gb|ACY33730.1| peptide chain release factor 2 [Comamonas testosteroni CNB-2] Length = 299 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 156/296 (52%), Positives = 210/296 (70%), Gaps = 1/296 (0%) Query: 58 FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117 ++++ L DN L E++ EE D + L+ ++K +E +F + GEAD + Sbjct: 3 TLEKLTTELADNSELFEMSKEEGDDAGLETIEAETAKLKPLIEELEFRRMFGGEADPLNC 62 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 ++++ AGAGGTE+ DWA+MLLR Y ++AE++ FK E G+ AGIKSAT+ ++G A Sbjct: 63 FIDIQAGAGGTEACDWASMLLRQYLKYAERKGFKATVEEETPGDVAGIKSATIKVEGEYA 122 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 YG L+ E GVHRLVR SP+DS+ RHTSFSS++VYP +DDSIEI I+ SD R DTYRASG Sbjct: 123 YGLLRTETGVHRLVRKSPFDSSGGRHTSFSSLFVYPEIDDSIEININPSDVRTDTYRASG 182 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 AGGQH+N TDSAVR+THIPTG+VVQCQ RSQH N+ AW LR++LY+ E++KR E Sbjct: 183 AGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKRMEEQQ 242 Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 E +KT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 243 KLEDTKTDVGWGHQIRSYVLD-NSRIKDLRTNVEVSATQKVLDGDLDVFIEASLKQ 297 >gi|300115109|ref|YP_003761684.1| peptide chain release factor 1 [Nitrosococcus watsonii C-113] gi|299541046|gb|ADJ29363.1| peptide chain release factor 1 [Nitrosococcus watsonii C-113] Length = 360 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 115/346 (33%), Positives = 186/346 (53%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---LCDNLIL 72 + +R L +P + + + L +E L+ IS ++ + L ++ L Sbjct: 9 LETLAERQQELTALLAEPEIASAQKQFRELSQEYAQLEPVISCFRDFEQAQNVLDESKAL 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L+ E +E + ++++ L + D + +LE+ AG GG E+ Sbjct: 69 LQDQDPELRVLAQEEIAATEKKLERLDRELHTLLLPTDPNDKRNIFLEIRAGTGGDEAAL 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A+ LLRMY R+ E+R ++TE + GE G K + I G AY LK E G HR+ R Sbjct: 129 FASDLLRMYLRYVEQRGWRTEIMGDSPGEHGGHKEIIVRIVGAGAYSRLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ + P ++ EI+I+ +D R+DT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPQTESQGRIHTSACTVAIMPEAEEIDEIDINPADLRVDTFRASGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+P+G+VV+CQ ERSQHKN+A+A ++LR K ++ + +A + ++ IG G Sbjct: 249 THLPSGIVVECQDERSQHKNRARAMSLLRTK--LKLEEEEKLVAEETATRRSLIGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ ++L G+LD + +A + Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYKLDEILQGNLDAIIDLLVAEYQ 351 >gi|87120696|ref|ZP_01076589.1| peptide chain release factor 2, programmed frameshift [Marinomonas sp. MED121] gi|86163924|gb|EAQ65196.1| peptide chain release factor 2, programmed frameshift [Marinomonas sp. MED121] Length = 293 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 160/292 (54%), Positives = 215/292 (73%), Gaps = 1/292 (0%) Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D LL++A+EEDD ++ + L+ ++ ++ +F + S E D +A+L++ Sbjct: 1 MESGLVDAKELLDMAVEEDDEDSVEAVTMELEELEAQLSKLEFRRMFSQEMDPTNAFLDI 60 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GGTE+QDWANMLLRMY RW E + FK E +E+ G+ AGIKSAT+ +G A+GWL Sbjct: 61 QAGSGGTEAQDWANMLLRMYLRWGEDKGFKVELMEVSAGDVAGIKSATIRFEGEYAFGWL 120 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS SRRHTSF+S+++ P +DD++EI+I+ +D R DTYR+SGAGGQ Sbjct: 121 RTETGVHRLVRKSPFDSGSRRHTSFASVFLSPEIDDNVEIDINPADLRTDTYRSSGAGGQ 180 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRITHIPTG+VVQCQ +RSQH N+ A LRAKLYE E+QKR E A E Sbjct: 181 HVNTTDSAVRITHIPTGIVVQCQNQRSQHANRDFAMKQLRAKLYEFEMQKRTEAAQAVED 240 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K++IGWG QIRSYVL +KDLRT +E ++ VLDG+LD F+ A+L Sbjct: 241 TKSDIGWGSQIRSYVLD-SSRIKDLRTGVESSNTGAVLDGNLDQFIVASLKQ 291 >gi|125623422|ref|YP_001031905.1| peptide chain release factor 1 [Lactococcus lactis subsp. cremoris MG1363] gi|166223566|sp|A2RIR4|RF1_LACLM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|124492230|emb|CAL97159.1| peptide chain release factor 1 (RF-1) [Lactococcus lactis subsp. cremoris MG1363] gi|300070169|gb|ADJ59569.1| peptide chain release factor 1 [Lactococcus lactis subsp. cremoris NZ9000] Length = 357 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 102/352 (28%), Positives = 176/352 (50%), Gaps = 13/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---D 68 +FD ++ V R L DP + + L RE L + ++ E + L D Sbjct: 1 MFDQLESIVGRYEELGELLSDPEVVSDTKRFMELSREEADLRDKVATYNEYKKVLETISD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAG 126 + +L +D+ + + + + + EV ++ + LL + + + LE+ AG Sbjct: 61 SEEMLGEGGLDDEMKEMLKEELSSAKSQKEVLEEEIKILLLPKDPNDGKNIILEIRGAAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A LL MY ++E + +K E +E + G K + LI GP+ Y LK E G Sbjct: 121 GDEAALFAGDLLNMYQHFSESQGWKFEIMEANITGIGGYKEVSALISGPSVYSKLKYESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ ++ R HTS +++ V P V++ I + D R+D Y ASGAGGQ+VN Sbjct: 181 AHRVQRVPVTETQGRVHTSTATVLVMPEVEEFEMT-IEQKDLRVDIYHASGAGGQNVNKV 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +AVR+ H+PTG+ V+ Q+ER+Q KN+ +A +L K+++ ++ E+ K+ + Sbjct: 240 ATAVRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYY--QQIELDKQNTERKSTV 297 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R + +L G +D+ + A + + Sbjct: 298 GTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKMDEVIDALIVYDQ 348 >gi|160876841|ref|YP_001556157.1| peptide chain release factor 1 [Shewanella baltica OS195] gi|189039990|sp|A9L2D4|RF1_SHEB9 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|160862363|gb|ABX50897.1| peptide chain release factor 1 [Shewanella baltica OS195] gi|315269044|gb|ADT95897.1| peptide chain release factor 1 [Shewanella baltica OS678] Length = 363 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 109/338 (32%), Positives = 178/338 (52%), Gaps = 9/338 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R + D + + + L +E L++ ++ K Q D E+ Sbjct: 9 LEGLLERNEEVMALLGDASVISDQDRFRALSKEYAQLEDVVAGFKAYQQAQVDLDSAKEM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + Q L D +A++E+ AGAGG E+ Sbjct: 69 LEEDDAEMREMAQEEMKAAKAKLEHLEDELQILLLPKDPDDDKNAFVEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE +++ E + ++GE G K + + G YG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAEANRWQIEIMSCNEGEHGGFKEVIMKVSGDGVYGKLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V V ++ I I+ +D ++DT+R+SGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRVHTSAVTVVVLHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV+CQ +RSQHKN+AQA ++L A++ +E +KR + ++ + G Sbjct: 249 THIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEE--STRRSLVASGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 ++R+Y P V + R N+ ++V++GDLD + Sbjct: 307 ERVRTYNF-PQGRVSEHRINLTLYRLNEVMEGDLDAIL 343 >gi|167754864|ref|ZP_02426991.1| hypothetical protein CLORAM_00368 [Clostridium ramosum DSM 1402] gi|237735404|ref|ZP_04565885.1| peptide chain release factor 1 [Mollicutes bacterium D7] gi|167704914|gb|EDS19493.1| hypothetical protein CLORAM_00368 [Clostridium ramosum DSM 1402] gi|229381149|gb|EEO31240.1| peptide chain release factor 1 [Coprobacillus sp. D7] Length = 358 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 113/352 (32%), Positives = 181/352 (51%), Gaps = 11/352 (3%) Query: 11 GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---L 66 + D R L DP + ++ + + +E+ L A +E ++ + Sbjct: 3 ESMLDRLKTMENRYEELGHMLMDPDIGSDIKKMTEVTKEQSSLQAAYDLYQEYKEVEAGI 62 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D L + + E E ++ R+ + + E + D+ D +E+ AG Sbjct: 63 SDAKELAKESDPEIKEMAKMELAELETRLPEIISKLEIELIPKDPNDNKDVIMEIRGAAG 122 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E +A L RMY ++AE + +K E +E D E G + ++KG + YG LK E G Sbjct: 123 GDEGNIFAGDLYRMYVKYAESQGWKVEVMEAVDAEAGGYSLISFMVKGEDVYGKLKFESG 182 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ ++ R HTS +++ V P + +++EI++SD RIDTYRASGAGGQH+N T Sbjct: 183 SHRVQRVPKTETQGRVHTSTATVLVMP-EMEEVDVEINKSDLRIDTYRASGAGGQHINKT 241 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PTG+V Q RSQH NK +A L +++Y+ Q+ +E +G K+++ Sbjct: 242 DSAVRITHLPTGIVAASQDGRSQHDNKDKAMKALVSRIYDFYQQQHDE--QVGSERKSKV 299 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R + ++DG LDD + A + + Sbjct: 300 GSGDRAEKIRTYNY-PQNRVTDHRIGLTIQQLDRIVDGKLDDIITALINEDQ 350 >gi|268316168|ref|YP_003289887.1| peptide chain release factor 1 [Rhodothermus marinus DSM 4252] gi|262333702|gb|ACY47499.1| peptide chain release factor 1 [Rhodothermus marinus DSM 4252] Length = 360 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 116/348 (33%), Positives = 183/348 (52%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + DP + + L RE L + I+ + L + L EL Sbjct: 7 LEEIKRRYEEVTQALSDPEVAADPKRLAELGREHASLRAVVEAIEAYERLLAEQESLREL 66 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D +++ L+ ++ + + + E D +A +E+ AG GG E+ Sbjct: 67 IRTESDPELIRMARHELEELEERLPAVEEDLRLRLIPQDEMDRRNAIVEIRAGTGGDEAA 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AE++ +K E L+ G G K +KGP+ YG +K E GVHR+ Sbjct: 127 LFAGDLFRMYSRFAERKGWKLEVLDASPGTVGGFKEIIFSLKGPDVYGTMKYESGVHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +S+ V P + +++EI D RID +RASG GGQHVN T+SAVR Sbjct: 187 RVPATESQGRIHTSAASVVVLP-EAEEVDVEIRPEDLRIDVFRASGPGGQHVNRTESAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+PTG+VV CQ E+SQH+N+ +A +LRA+LYELE +++ + + I G + Sbjct: 246 ITHVPTGIVVACQDEKSQHQNREKALRILRARLYELEQERQRAERDAV--RRASIKTGDR 303 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTS--PSDVLDGDLDDFMKATLAIK 354 IR+Y P V D R + + +++G+LD+ + A + Sbjct: 304 SAKIRTYNF-PQDRVTDHRLEGDLKNWPLHRIIEGELDELINALRTAE 350 >gi|118602715|ref|YP_903930.1| peptide chain release factor 1 [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|166223599|sp|A1AX02|RF1_RUTMC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|118567654|gb|ABL02459.1| bacterial peptide chain release factor 1 (bRF-1) [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 363 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 114/351 (32%), Positives = 180/351 (51%), Gaps = 10/351 (2%) Query: 12 GLF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +F + RL ++ +P + +V + L ER L + + Sbjct: 4 SIFAKLEQLSMRLEEVDVMLSNPKVASDVKKFTKLSIERAQLTPVNQQFQAYLSHHRNLE 63 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGG 127 + LE+D + L K + L DS + +E+ AG GG Sbjct: 64 DAKLMLLEDDMDIKAMAKEEMLDVKKKLDHLYLELKKSLLPKDPNDSRNIIIEIRAGTGG 123 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +++ L +MY+R+ EK+K++ E + GE G K I G Y LK E G Sbjct: 124 NEASIFSSNLFKMYSRYTEKKKWQIEVISSSLGEHGGFKEIIARISGVGVYSKLKFESGA 183 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +I + P V++ E+ I+ SD R+DT+RASGAGGQHVN T+ Sbjct: 184 HRVQRVPETESQGRVHTSACTIAIMPEVENIEEVNINMSDVRVDTFRASGAGGQHVNKTN 243 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTG V +CQ RSQHKNKAQA +L +++++L Q++E+ + K IG Sbjct: 244 SAVRITHIPTGTVAECQDGRSQHKNKAQALLVLASRIFDL--QQQEQHKEQASTRKELIG 301 Query: 308 WGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P + D R N+ S++++G+L+ ++ + ++ Sbjct: 302 SGDRSQRIRTYNY-PQGRITDHRINLTLYKLSEIMEGNLNAIIEPLIVEQQ 351 >gi|254511294|ref|ZP_05123361.1| peptide chain release factor 1 [Rhodobacteraceae bacterium KLH11] gi|221535005|gb|EEE37993.1| peptide chain release factor 1 [Rhodobacteraceae bacterium KLH11] Length = 357 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 116/344 (33%), Positives = 175/344 (50%), Gaps = 12/344 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + QR +L D ++ L +E L + I + + D + Sbjct: 13 LEQITQRFQYLEAAMADGASGGDIA---ALAKEYSDLKPVVDQILGWRQLVADLAEAEAM 69 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + +E LQ Q L AD+ A LE+ G GG E+ +A Sbjct: 70 LSDPDMKELAEEEIPQLQARIPEAEHALQLALLPRDAADARPAMLEIRPGTGGDEAALFA 129 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE R ++ E +E + GIK IKG N + +K E GVHR+ R+ Sbjct: 130 GDLLRMYQRYAEGRGWQFEIIEEQASDLGGIKEVVAHIKGDNVFARMKYESGVHRVQRVP 189 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P + ++I+I +D RIDT R+SGAGGQHVNTTDSAVRITH Sbjct: 190 ETESGGRIHTSAATVAVLP-EAEDVDIQIDANDIRIDTMRSSGAGGQHVNTTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +P+G+VV E+SQH+N+ A +L+ +LY+LE Q+ + + +++G G + Sbjct: 249 LPSGIVVTSS-EKSQHRNREIAMQVLKTRLYDLERQRID--SARSADRASQVGSGDRSER 305 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ V+ GDLD+ + A A + Sbjct: 306 IRTYNF-PQGRMTDHRINLTLYKLDQVMQGDLDEVIDALTADDQ 348 >gi|328957995|ref|YP_004375381.1| peptide chain release factor 1 [Carnobacterium sp. 17-4] gi|328674319|gb|AEB30365.1| peptide chain release factor 1 [Carnobacterium sp. 17-4] Length = 358 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 106/351 (30%), Positives = 172/351 (49%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ R LN DP + + L +E + ++ + ++ D Sbjct: 1 MFDRLESVEGRYEELNELLSDPEVVSDTKRLMKLTKEEAAIRETVATYRRYKEVSQDISD 60 Query: 72 LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 E+ E+ D + + + + E + L E D + +E+ AGG Sbjct: 61 TEEMLGEKLDSEMAEMAKEELNDLKKEKTEIEEKMKILMLPKDENDDRNIIMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+Q +A L MY ++A+ + ++TE L+ + G K TL+I G N Y LK E G Sbjct: 121 DEAQLFAGTLFNMYQKYADAQGWRTEVLDANITGIGGYKEITLMITGDNVYSKLKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +E+ + + D R D Y ASGAGGQHVN T Sbjct: 181 HRVQRVPSTESQGRIHTSTATVVVMP-EAEEVELNLPDKDIRTDIYHASGAGGQHVNKTA 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+ V Q ERSQ KN+ +A +LRA++Y+ ++ + K+ +G Sbjct: 240 SAVRLTHLPTGIAVAMQDERSQIKNREKAMKVLRARVYDHI--QQAAQSEYDAERKSAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L G LD+ + A + + Sbjct: 298 TGDRSERIRTYNY-PQSRVTDHRIGLTIQKLDQILSGKLDEIIDALILNDQ 347 >gi|281491061|ref|YP_003353041.1| peptide chain release factor 1 [Lactococcus lactis subsp. lactis KF147] gi|281374819|gb|ADA64339.1| Peptide chain release factor 1 (RF-1) [Lactococcus lactis subsp. lactis KF147] Length = 357 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 101/352 (28%), Positives = 176/352 (50%), Gaps = 13/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---D 68 +FD ++ V R L DP + + L RE L + ++ + + L D Sbjct: 1 MFDQLESIVGRYEELGELLSDPEVVSDTKRFMELSREEADLCDKVATYNDYKKVLETISD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAG 126 + +L +DD + + + + + E+ ++ + LL + + + LE+ AG Sbjct: 61 SEEMLGEGGLDDDMKEMLKEELSSAKSQKELLEEEIKILLLPKDPNDGKNIILEIRGAAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A LL MY ++E + +K E +E + G K + LI GP+ Y LK E G Sbjct: 121 GDEAALFAGDLLNMYQHFSESQGWKFEIMEANITGIGGYKEVSALISGPSVYSKLKYESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ ++ R HTS +++ V P V++ I + D R+D Y ASGAGGQ+VN Sbjct: 181 AHRVQRVPVTETQGRVHTSTATVLVMPEVEEFEMT-IDQKDLRVDIYHASGAGGQNVNKV 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +AVR+ H+PTG+ V+ Q+ER+Q KN+ +A +L K+++ ++ E+ K+ + Sbjct: 240 ATAVRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYY--QQIELDKQNAERKSTV 297 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R + +L G +D+ + A + + Sbjct: 298 GTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKMDEVIDALIVYDQ 348 >gi|319788960|ref|YP_004090275.1| peptide chain release factor 1 [Ruminococcus albus 7] gi|315450827|gb|ADU24389.1| peptide chain release factor 1 [Ruminococcus albus 7] Length = 359 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 102/352 (28%), Positives = 177/352 (50%), Gaps = 12/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + + +N + P + + LM E ++L+ + ++E + Sbjct: 1 MFEKLRALEDKFNEINERLMQPEVVNDSKLYTELMIEYKNLEPVVEALREYDKAKAEFDE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKL-----EVEYKQFESLLSGEADSNDAYLEVHAGAG 126 +E++ + + +++ E + L D + +E+ GAG Sbjct: 61 AVEMSSDSSLDADMKDMVQEQYAESKAAMARLEEELKILLLPKDPNDDRNVIIEIRGGAG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +AN L RMY+ +A ++ ++ E + ++ E G K T + G AY LK E G Sbjct: 121 GEEAALFANSLYRMYSMYAAQKNWQIEVMSANETELGGYKEITFTVSGQGAYSRLKYESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S R HTS ++ V P VDD E + +++ +R+SGAGGQH+N T Sbjct: 181 VHRVQRVPETESQGRVHTSTVTVAVLPEVDDVELEINEEKEIKMEVFRSSGAGGQHINKT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+ HIPTG VV+CQ ERSQ +N+ +A ML+AKL L+ + R + I + ++++ Sbjct: 241 SSAVRLIHIPTGTVVECQNERSQFQNREKALKMLKAKL--LDEKVRAQEDEIASNRRSQV 298 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P + D R + +L+G+LD+ + A + Sbjct: 299 GTGDRSEKIRTYNF-PESRISDHRIKLTLYKLEQILNGNLDEVIDALATADQ 349 >gi|301299965|ref|ZP_07206192.1| peptide chain release factor 1 [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852447|gb|EFK80104.1| peptide chain release factor 1 [Lactobacillus salivarius ACS-116-V-Col5a] Length = 360 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 106/352 (30%), Positives = 182/352 (51%), Gaps = 12/352 (3%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLC 67 LFD R L DP + + L +E L + + + ++ Sbjct: 3 KLFDRLQMLEDRYEELGELLSDPDVISDTKRFTKLSKEMVDLRETVEKYNKYKEVTQQIS 62 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D+ +L L+++ S+++E N + K E + L D + +E+ AG Sbjct: 63 DDEEMLSDGLDDEMASLVKEELSNAKNEKVKLEEEIKILLLPKDPNDDKNIIMEIRGAAG 122 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L MY+++AE++ + E ++ + E G K L+I G + + LK E G Sbjct: 123 GDEASLFAADLFSMYSKYAERQGWSIEVIDKNVTEVGGFKEIALIINGNSVWSKLKYESG 182 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ RI +S R HTS +++ V P ++ +EIE+ D R+D YR+SGAGGQH+N T Sbjct: 183 AHRVQRIPVTESAGRVHTSTATVVVMP-EEEDVEIELDPKDIRVDVYRSSGAGGQHINKT 241 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+TH+PTG+VV Q +RSQ +N+ +A +L+A++Y+ Q+ E + + K+ + Sbjct: 242 SSAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDYYAQQ--EQSEYDANRKSAV 299 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R + +++G+L+D + A + ++ Sbjct: 300 GTGDRSERIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELEDVIDALVLFEQ 350 >gi|224541463|ref|ZP_03682002.1| hypothetical protein CATMIT_00632 [Catenibacterium mitsuokai DSM 15897] gi|224525621|gb|EEF94726.1| hypothetical protein CATMIT_00632 [Catenibacterium mitsuokai DSM 15897] Length = 358 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 110/346 (31%), Positives = 171/346 (49%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL---CDNLIL 72 +R L DP + ++ + +E+ L+ A + KE + L + L Sbjct: 8 LQTVEKRYEELTQILMDPSIANDIQKMTQASKEQASLEKAYNLYKEYKALLDGIEEAKEL 67 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L E E + ++ + Q E + D + +E+ AGG E Sbjct: 68 LNENDPEIKEMAKMELEELEKKQPIMEHDIQIELIPKDPNDEKNVVMEIRGAAGGDEGNI 127 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AE + +K E + E G + +IKG Y +K E G HR+ R Sbjct: 128 FAGDLFRMYSKYAESQGWKIEIEDAQPSEAGGYSLISFIIKGNGVYSKMKFESGSHRVQR 187 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ V P + ++I+I D RIDTYR+SGAGGQH+N TDSAVRI Sbjct: 188 VPKTETQGRVHTSTATVLVMP-EAEEVDIDIDPKDLRIDTYRSSGAGGQHINKTDSAVRI 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+V Q RSQH N+A+A LR ++YE +L REE +G + +IG G Sbjct: 247 THIPTGIVATSQDGRSQHDNRAKAMQSLRTRVYEAKL--REEEEKLGNERRNKIGSGDRA 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +++G L+ + A + + Sbjct: 305 EKIRTYNY-PQNRVTDHRIGLTIQQLDRIMEGKLEPIIDALINEDQ 349 >gi|325929457|ref|ZP_08190585.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas perforans 91-118] gi|325540232|gb|EGD11846.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas perforans 91-118] Length = 361 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 112/345 (32%), Positives = 174/345 (50%), Gaps = 8/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R L DP + N + L RE L+ ++E D L Sbjct: 9 LEALAERREELQHLLSDPDVVGNNDTFRTLSRELSQLEPVAVALEEEARAKADLATAEAL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQF-ESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E Q +++ + + D + +LEV AG GG E+ +A Sbjct: 69 RNDPEMRELAEEEIAAAQARLEQLDAQLASLLVPRDPRDDGNLFLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+AE++ +K E GE G K + G AY LK E G HR+ R+ Sbjct: 129 GDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ + P DD EI I+ +D ++DT+R+SGAGGQHVN T+SA+RITH Sbjct: 189 ATESQGRIHTSAATVAIIPEADDVEEITINPADLKVDTFRSSGAGGQHVNKTESAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311 +P+GVVV+CQ ERSQH N+ +A L+A+L + E K A ++ K ++G G + Sbjct: 249 VPSGVVVECQTERSQHANRDKAMKRLKAQLLDAERSK--AAAAEAQTRKLQVGSGDRSQR 306 Query: 312 IRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R + ++++GDLD + L + Sbjct: 307 IRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIGRLLHEHQ 350 >gi|254482800|ref|ZP_05096037.1| peptide chain release factor 1 [marine gamma proteobacterium HTCC2148] gi|214036881|gb|EEB77551.1| peptide chain release factor 1 [marine gamma proteobacterium HTCC2148] Length = 361 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 110/341 (32%), Positives = 171/341 (50%), Gaps = 9/341 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R ++ D + + + L RE L+ + + D + Sbjct: 9 LETLTDRHEEVSALLGDNETISDQDKFRDLSREYSELEAVVRCYADYSQVKGDLDEARLM 68 Query: 76 ALEEDDCSILQETSDNLQ---RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + R++ Q L DS++ +LE+ AG GG E+ Sbjct: 69 LEDSDPDLREMAQEEIDSGSGRLEQLEAQLQALLLPRDPNDSHNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AE +K E L GE G K ++G + Y LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAENMGWKVEVLSERHGEHGGYKEIITRVEGRDVYAHLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ + P + ++EI+++D R+DTYRASGAGGQHVN TDSAVR+ Sbjct: 189 VPETESQGRIHTSACTVAIMPEAEAVDQVEINKADLRVDTYRASGAGGQHVNKTDSAVRL 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+P+G+VV+CQ ERSQHKN+A+A ++L+AKL K E E + +G G Sbjct: 249 THLPSGIVVECQDERSQHKNRARAMSLLQAKLLTSAQDKAAEEQ--AEQRRNLVGTGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P + D R N+ ++V++GDL + Sbjct: 307 DRIRTYNF-PQGRLTDHRINLTLYKLAEVVEGDLGAVVGPL 346 >gi|254461785|ref|ZP_05075201.1| peptide chain release factor 1 [Rhodobacterales bacterium HTCC2083] gi|206678374|gb|EDZ42861.1| peptide chain release factor 1 [Rhodobacteraceae bacterium HTCC2083] Length = 351 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 121/342 (35%), Positives = 175/342 (51%), Gaps = 12/342 (3%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 QR FL K + E L RE + + + + L D + Sbjct: 9 QITQRFEFLEAKMAGG---ADPGEIADLAREYSDMKPVVEQVAAYRQLLSDIEDAEAMLD 65 Query: 78 EEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 + + + +E + Q L EAD+ A +E+ G GG E+ +A Sbjct: 66 DPEMKELAEEELPALKAAMPKAEAALQLALLPKDEADARPAMIEIRPGTGGDEAALFAAD 125 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 LLRMY R++E R +K E +E E GIK T IKG N + LK E GVHR+ R+ Sbjct: 126 LLRMYQRYSEARGWKFEIIEEQLTELGGIKEVTGHIKGENVFARLKYESGVHRVQRVPTT 185 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S R HTS +++ V P +++ I+ +D RIDT RASGAGGQHVNTTDSAVRITHIP Sbjct: 186 ESGGRIHTSAATVAVLP-EAQEVDLVIAANDIRIDTMRASGAGGQHVNTTDSAVRITHIP 244 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG++V E+SQH+N+ A +LR +LY+ E Q+ +E K+++G G +IR Sbjct: 245 TGIIV-VSAEKSQHRNREIAMQVLRTRLYDAERQRIDEER--SADRKSQVGSGDRSERIR 301 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +Y P + D R N+ V++GDLD+ + A A + Sbjct: 302 TYNF-PQGRMSDHRINLTLYKLDQVMEGDLDEIIDALTADDQ 342 >gi|254515300|ref|ZP_05127361.1| peptide chain release factor 1 [gamma proteobacterium NOR5-3] gi|219677543|gb|EED33908.1| peptide chain release factor 1 [gamma proteobacterium NOR5-3] Length = 361 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 114/337 (33%), Positives = 178/337 (52%), Gaps = 9/337 (2%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 L + +R ++ DP + + + + L RE L+ + E Q L D Sbjct: 6 LLKLETLSERHEEVSALLGDPGVIADQDQFRQLSREYSELETVVKCFGEYQALLGDIEAA 65 Query: 73 LELALEEDDCSILQETSDNLQ---RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 + ++D ++ + R + Q L DS++ +LE+ AG GG E Sbjct: 66 QSMLADDDADMREMAKAEISEGEARREALEAELQVLLLPRDPRDSHNVFLEIRAGTGGDE 125 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + ++ L RMYTR+AE++ ++ E L GE G K I+G + Y +LK E G HR Sbjct: 126 AAIFSGDLQRMYTRFAERQGWRLEVLSERPGEHGGYKEIISRIEGTDVYAYLKFESGAHR 185 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ + ++ IEI+++D R+DTYR+SGAGGQHVN TDSA Sbjct: 186 VQRVPETESQGRIHTSACTVAILAEPEELEAIEINKADLRVDTYRSSGAGGQHVNKTDSA 245 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+TH+PTG+VV+CQ ERSQHKN+A+A ++L+AKL + + E + +G G Sbjct: 246 VRLTHLPTGIVVECQDERSQHKNRARAMSLLQAKLTSSAE--AAQASEQAEQRRNLVGTG 303 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 +IR+Y P V D R N+ +V+ GD+ Sbjct: 304 DRSDRIRTYNF-PQGRVTDHRINLTLYKLDEVMAGDM 339 >gi|257870909|ref|ZP_05650562.1| peptide chain release factor 1 [Enterococcus gallinarum EG2] gi|257805073|gb|EEV33895.1| peptide chain release factor 1 [Enterococcus gallinarum EG2] Length = 357 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 105/347 (30%), Positives = 168/347 (48%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + + + ++ + EL Sbjct: 5 LQAIEDRYEELGELLSDPAVISDTKRFMQLSKEEANTRETVEVYRRYKEVVEGIKDTEEL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + L +K E + + L D + +E+ AGG E+ Sbjct: 65 LGENLDAEMAEMAKEELSDLKKEKDVLEDRIKILLLPKDPNDDKNIIMEIRGAAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MY ++AE + +K E ++ + G K ++I G N Y LK E G HR+ Sbjct: 125 LFAGDLFNMYQKYAETQGWKVEVMDANVTGIGGYKEVIMMISGENVYSKLKYESGAHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + +EI+I++ D R D Y ASGAGGQHVN T SAVR Sbjct: 185 RVPSTESQGRIHTSTATVVVMP-EAEEVEIDIADKDIRTDIYHASGAGGQHVNKTASAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q ERSQ KN+ +A +LRA++Y+ ++E + + K+ +G G Sbjct: 244 LTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYDQI--QQEARSEYDANRKSAVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIIDALIMYDQ 347 >gi|229545076|ref|ZP_04433801.1| peptide chain release factor 1 [Enterococcus faecalis TX1322] gi|307287617|ref|ZP_07567660.1| peptide chain release factor 1 [Enterococcus faecalis TX0109] gi|229309968|gb|EEN75955.1| peptide chain release factor 1 [Enterococcus faecalis TX1322] gi|306501355|gb|EFM70658.1| peptide chain release factor 1 [Enterococcus faecalis TX0109] gi|315165014|gb|EFU09031.1| peptide chain release factor 1 [Enterococcus faecalis TX1302] Length = 357 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 107/347 (30%), Positives = 174/347 (50%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---DNLIL 72 + R L DP + + L +E + + + + + D L Sbjct: 5 LQSIEDRYEELGELLSDPAVISDTKRFMELSKEEANTRETVEVYRRYKQVVEGISDAEEL 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L L+ + + +E +L++ K +E + + L D + +E+ AGG E+ Sbjct: 65 LSENLDAEMAEMAKEELSDLKKEKEVLEDRIKILLLPKDPNDDKNIIMEIRGAAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MY ++AE + +K E LE + G K ++I G N + LK E G HR+ Sbjct: 125 LFAGDLFNMYQKYAEAQGWKVEVLEANVTGIGGYKEVIMMISGDNVFSKLKYESGAHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + +EIE+++ D R+D Y ASGAGGQHVN T SAVR Sbjct: 185 RVPSTESQGRIHTSTATVVVMP-EAEEVEIELADKDIRVDIYHASGAGGQHVNKTASAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q ERSQ KN+ +A +LRA++Y+ ++E + + K+ +G G Sbjct: 244 LTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYDQI--QQEAQSEYDANRKSAVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIIDALVLYDQ 347 >gi|194332966|ref|YP_002014826.1| peptide chain release factor 1 [Prosthecochloris aestuarii DSM 271] gi|238693294|sp|B4S385|RF1_PROA2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|194310784|gb|ACF45179.1| peptide chain release factor 1 [Prosthecochloris aestuarii DSM 271] Length = 357 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 112/348 (32%), Positives = 179/348 (51%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++A L + DP + + + L +E L + +L + Sbjct: 5 LESAKDHYIRLEEQLSDPDIIGDQQRFRKLNKEYSDLKEIVQAYDRYISNRRQIEEVLGM 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 +E D + + + + + + EADS + +E+ AG GG E+ Sbjct: 65 LAKESDPEMKALAEEEYNELLADQPELEQQLKLLLLPKDEADSRNVIMEIRAGTGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LLRMY R+AE+R +K E LE ++ G K A++ I G + YG +K E GVHR+ Sbjct: 125 LFATDLLRMYQRFAERRGWKCELLEFNEANTPGACKEASMAISGHDVYGIMKFESGVHRV 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +S+ V P + ++IEI + D R+DT+R+ G GGQ+VN ++AV Sbjct: 185 QRVPETETQGRIHTSAASVAVLP-EAEEVDIEIRKDDLRVDTFRSGGKGGQNVNKVETAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH P+G+VV CQ+ERSQ +N+ +A MLRAKLY+ EL + + K+ + G Sbjct: 244 RITHAPSGIVVACQEERSQLQNRERAMKMLRAKLYDRELADKNKERADL--RKSMVSSGD 301 Query: 311 Q---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + IR+Y P V D R + +LDG+LDD ++A ++ Sbjct: 302 RSAKIRTYNF-PQSRVTDHRIGYTSHALPQILDGNLDDLIEALKLYEQ 348 >gi|253702392|ref|YP_003023581.1| peptide chain release factor 1 [Geobacter sp. M21] gi|251777242|gb|ACT19823.1| peptide chain release factor 1 [Geobacter sp. M21] Length = 359 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 108/333 (32%), Positives = 173/333 (51%), Gaps = 10/333 (3%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LILLELALEEDDCSIL 85 DP + N E + L +E L ++ +E + L D LL+ +E Sbjct: 20 LLSDPEVLANQTEFRKLSKEHSGLAELVAAYREYKKILSDIDDNKELLKEPDQEMREMAQ 79 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E R + + L D + LE+ AG GG ES +A L RMY+R+A Sbjct: 80 AELLSLEARREELEGEIKLLLLPKDPNDDKNVVLEIRAGTGGDESALFAGDLFRMYSRFA 139 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E +++ E + + E+ G K L++G + LK E G HR+ R+ ++ R HTS Sbjct: 140 ETNRWRVEIISASESEKGGFKEVIALVEGTGVFAKLKYESGTHRVQRVPETEAQGRIHTS 199 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 ++ V P + ++I+I+ +D +ID YR+SGAGGQHVNTTDSAVRITH+PTG VV CQ+ Sbjct: 200 ACTVAVMP-EAEDVDIDINPADLKIDVYRSSGAGGQHVNTTDSAVRITHLPTGTVVACQE 258 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQM 322 ERSQ KN+A+A +L++++ + L ++ A + K+++G G +IR+Y P Sbjct: 259 ERSQIKNRAKAMKVLKSRILDNILMEQN--AKLAADRKSQVGSGDRSERIRTYNF-PQGR 315 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + D R + ++ GD+ + + A + Sbjct: 316 MTDHRIGLTLYRLDAIMAGDIAEIADSLRAHYQ 348 >gi|325921457|ref|ZP_08183312.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas gardneri ATCC 19865] gi|325548004|gb|EGD19003.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas gardneri ATCC 19865] Length = 361 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 112/345 (32%), Positives = 175/345 (50%), Gaps = 8/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R L DP + N + + L RE L+ +++ D + Sbjct: 9 LEALAERREELQHLLSDPEVVSNNDKFRTLSRELSQLEPLAVALEDEARAKADLSAAEAM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E Q E++ + + D + +LEV AG GG E+ +A Sbjct: 69 RNDPEMRELAEEEIATAQARLDELDAQLALLLVPRDPRDEGNLFLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+AE++ +K E GE G K + G AY LK E G HR+ R+ Sbjct: 129 GDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ + P DD EI I+ +D ++DT+R+SGAGGQHVN T+SA+RITH Sbjct: 189 ATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDTFRSSGAGGQHVNKTESAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311 +P+GVVV+CQ ERSQH N+ +A L+A+L E E K A ++ K ++G G + Sbjct: 249 VPSGVVVECQTERSQHANRDKAMKRLKAQLVEAERSK--AAAAEAQTRKLQVGSGDRSQR 306 Query: 312 IRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R + ++++GDLD + L + Sbjct: 307 IRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIARLLHEHQ 350 >gi|89900074|ref|YP_522545.1| peptide chain release factor 1 [Rhodoferax ferrireducens T118] gi|119361589|sp|Q21YY9|RF1_RHOFD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|89344811|gb|ABD69014.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodoferax ferrireducens T118] Length = 366 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 120/347 (34%), Positives = 182/347 (52%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72 RL L + Q++ + +L RE + S Q D L Sbjct: 9 LARYTDRLGELEFLLSREDIMQDMKQFLLLSREHTEVGAVASRWARYQQLEADLSGAQEL 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTES 130 L ++++ D + + + + +L+ + + +L + +A++E+ AG GG ES Sbjct: 69 LRGSVDDPDMTAMAQEEIDNASAELQKLENELQRMLLPKDPDDARNAFVEIRAGTGGDES 128 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LLRMYTR+ E+R +K E + E G K + I+G + YG LK E G HR+ Sbjct: 129 ALFAADLLRMYTRYCERRGWKAEIISESPSELGGYKEVVIKIEGDHVYGALKFESGGHRV 188 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS ++ V D+++ I+I+ +D RIDTYRASGAGGQH+N TDSAV Sbjct: 189 QRVPVTETQGRIHTSACTVAVLAEPDEAVAIQINPADLRIDTYRASGAGGQHINKTDSAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+V +CQ RSQH NKAQA +L A++ E + E A K IG G Sbjct: 249 RITHLPTGIVAECQDGRSQHSNKAQALKVLTARI--HEKDRSERAAKDAAERKGLIGSGD 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D R N+ +++GDLDD ++A A + Sbjct: 307 RSDRIRTYNF-PQGRLTDHRINLTLYKLLTIMEGDLDDVVQALQAFE 352 >gi|257867023|ref|ZP_05646676.1| peptide chain release factor 1 [Enterococcus casseliflavus EC30] gi|257873358|ref|ZP_05653011.1| peptide chain release factor 1 [Enterococcus casseliflavus EC10] gi|257877101|ref|ZP_05656754.1| peptide chain release factor 1 [Enterococcus casseliflavus EC20] gi|325568363|ref|ZP_08144730.1| peptide chain release factor RF1 [Enterococcus casseliflavus ATCC 12755] gi|257801079|gb|EEV30009.1| peptide chain release factor 1 [Enterococcus casseliflavus EC30] gi|257807522|gb|EEV36344.1| peptide chain release factor 1 [Enterococcus casseliflavus EC10] gi|257811267|gb|EEV40087.1| peptide chain release factor 1 [Enterococcus casseliflavus EC20] gi|325158132|gb|EGC70285.1| peptide chain release factor RF1 [Enterococcus casseliflavus ATCC 12755] Length = 357 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 102/347 (29%), Positives = 167/347 (48%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + + + ++ + E+ Sbjct: 5 LQAIEDRYEELGELLSDPAVISDTKRFMQLSKEEANTRETVEVYRRYKEVVEGIKDTEEM 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + L +K E + + L D + +E+ AGG E+ Sbjct: 65 LGENLDAEMAEMAKEELSDLKKEKDVLEERIKILLLPKDPNDDKNIIMEIRGAAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MY ++AE + +K E ++ + G K ++I G N + LK E G HR+ Sbjct: 125 LFAGDLFNMYQKYAENQGWKVEVMDANVTGIGGYKEVIMMITGDNVFSKLKYESGAHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + +EI+I++ D R D Y ASGAGGQHVN T SAVR Sbjct: 185 RVPSTESQGRIHTSTATVVVMP-EAEEVEIDIADKDIRTDIYHASGAGGQHVNKTASAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+ V Q ERSQ KN+ +A +LRA++Y+ ++E + + K+ +G G Sbjct: 244 LTHLPTGIAVAMQDERSQLKNREKAMKVLRARVYD--QMQQEAQSEYDANRKSAVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIVDALIVYDQ 347 >gi|29377042|ref|NP_816196.1| peptide chain release factor 1 [Enterococcus faecalis V583] gi|227519760|ref|ZP_03949809.1| peptide chain release factor 1 [Enterococcus faecalis TX0104] gi|227554052|ref|ZP_03984099.1| peptide chain release factor 1 [Enterococcus faecalis HH22] gi|229549320|ref|ZP_04438045.1| peptide chain release factor 1 [Enterococcus faecalis ATCC 29200] gi|255972029|ref|ZP_05422615.1| peptide chain release factor 1 [Enterococcus faecalis T1] gi|255975086|ref|ZP_05425672.1| peptide chain release factor 1 [Enterococcus faecalis T2] gi|256616929|ref|ZP_05473775.1| peptide chain release factor 1 [Enterococcus faecalis ATCC 4200] gi|256763197|ref|ZP_05503777.1| peptide chain release factor 1 [Enterococcus faecalis T3] gi|256853870|ref|ZP_05559235.1| peptide chain release factor 1 [Enterococcus faecalis T8] gi|256957798|ref|ZP_05561969.1| peptide chain release factor 1 [Enterococcus faecalis DS5] gi|256961203|ref|ZP_05565374.1| peptide chain release factor 1 [Enterococcus faecalis Merz96] gi|256963678|ref|ZP_05567849.1| peptide chain release factor 1 [Enterococcus faecalis HIP11704] gi|257079736|ref|ZP_05574097.1| peptide chain release factor 1 [Enterococcus faecalis JH1] gi|257081918|ref|ZP_05576279.1| peptide chain release factor 1 [Enterococcus faecalis E1Sol] gi|257084460|ref|ZP_05578821.1| peptide chain release factor 1 [Enterococcus faecalis Fly1] gi|257087541|ref|ZP_05581902.1| peptide chain release factor 1 [Enterococcus faecalis D6] gi|257090700|ref|ZP_05585061.1| peptide chain release factor 1 [Enterococcus faecalis CH188] gi|257416748|ref|ZP_05593742.1| peptide chain release factor 1 [Enterococcus faecalis AR01/DG] gi|257419965|ref|ZP_05596959.1| peptide chain release factor [Enterococcus faecalis T11] gi|293384152|ref|ZP_06630046.1| peptide chain release factor 1 [Enterococcus faecalis R712] gi|293386966|ref|ZP_06631535.1| peptide chain release factor 1 [Enterococcus faecalis S613] gi|294779688|ref|ZP_06745078.1| peptide chain release factor 1 [Enterococcus faecalis PC1.1] gi|300861212|ref|ZP_07107299.1| peptide chain release factor 1 [Enterococcus faecalis TUSoD Ef11] gi|307270729|ref|ZP_07552020.1| peptide chain release factor 1 [Enterococcus faecalis TX4248] gi|307271624|ref|ZP_07552895.1| peptide chain release factor 1 [Enterococcus faecalis TX0855] gi|307276806|ref|ZP_07557917.1| peptide chain release factor 1 [Enterococcus faecalis TX2134] gi|307285597|ref|ZP_07565736.1| peptide chain release factor 1 [Enterococcus faecalis TX0860] gi|307290429|ref|ZP_07570344.1| peptide chain release factor 1 [Enterococcus faecalis TX0411] gi|312899933|ref|ZP_07759251.1| peptide chain release factor 1 [Enterococcus faecalis TX0470] gi|312905241|ref|ZP_07764361.1| peptide chain release factor 1 [Enterococcus faecalis TX0635] gi|312907897|ref|ZP_07766880.1| peptide chain release factor 1 [Enterococcus faecalis DAPTO 512] gi|312953588|ref|ZP_07772425.1| peptide chain release factor 1 [Enterococcus faecalis TX0102] gi|312978574|ref|ZP_07790312.1| peptide chain release factor 1 [Enterococcus faecalis DAPTO 516] gi|46576782|sp|Q831F6|RF1_ENTFA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|29344508|gb|AAO82266.1| peptide chain release factor 1 [Enterococcus faecalis V583] gi|227072848|gb|EEI10811.1| peptide chain release factor 1 [Enterococcus faecalis TX0104] gi|227176800|gb|EEI57772.1| peptide chain release factor 1 [Enterococcus faecalis HH22] gi|229305557|gb|EEN71553.1| peptide chain release factor 1 [Enterococcus faecalis ATCC 29200] gi|255963047|gb|EET95523.1| peptide chain release factor 1 [Enterococcus faecalis T1] gi|255967958|gb|EET98580.1| peptide chain release factor 1 [Enterococcus faecalis T2] gi|256596456|gb|EEU15632.1| peptide chain release factor 1 [Enterococcus faecalis ATCC 4200] gi|256684448|gb|EEU24143.1| peptide chain release factor 1 [Enterococcus faecalis T3] gi|256710813|gb|EEU25856.1| peptide chain release factor 1 [Enterococcus faecalis T8] gi|256948294|gb|EEU64926.1| peptide chain release factor 1 [Enterococcus faecalis DS5] gi|256951699|gb|EEU68331.1| peptide chain release factor 1 [Enterococcus faecalis Merz96] gi|256954174|gb|EEU70806.1| peptide chain release factor 1 [Enterococcus faecalis HIP11704] gi|256987766|gb|EEU75068.1| peptide chain release factor 1 [Enterococcus faecalis JH1] gi|256989948|gb|EEU77250.1| peptide chain release factor 1 [Enterococcus faecalis E1Sol] gi|256992490|gb|EEU79792.1| peptide chain release factor 1 [Enterococcus faecalis Fly1] gi|256995571|gb|EEU82873.1| peptide chain release factor 1 [Enterococcus faecalis D6] gi|256999512|gb|EEU86032.1| peptide chain release factor 1 [Enterococcus faecalis CH188] gi|257158576|gb|EEU88536.1| peptide chain release factor 1 [Enterococcus faecalis ARO1/DG] gi|257161793|gb|EEU91753.1| peptide chain release factor [Enterococcus faecalis T11] gi|291078632|gb|EFE15996.1| peptide chain release factor 1 [Enterococcus faecalis R712] gi|291083636|gb|EFE20599.1| peptide chain release factor 1 [Enterococcus faecalis S613] gi|294453242|gb|EFG21654.1| peptide chain release factor 1 [Enterococcus faecalis PC1.1] gi|295113546|emb|CBL32183.1| bacterial peptide chain release factor 1 (bRF-1) [Enterococcus sp. 7L76] gi|300850251|gb|EFK78001.1| peptide chain release factor 1 [Enterococcus faecalis TUSoD Ef11] gi|306498622|gb|EFM68124.1| peptide chain release factor 1 [Enterococcus faecalis TX0411] gi|306502821|gb|EFM72086.1| peptide chain release factor 1 [Enterococcus faecalis TX0860] gi|306506443|gb|EFM75602.1| peptide chain release factor 1 [Enterococcus faecalis TX2134] gi|306511502|gb|EFM80501.1| peptide chain release factor 1 [Enterococcus faecalis TX0855] gi|306513039|gb|EFM81680.1| peptide chain release factor 1 [Enterococcus faecalis TX4248] gi|310625988|gb|EFQ09271.1| peptide chain release factor 1 [Enterococcus faecalis DAPTO 512] gi|310628426|gb|EFQ11709.1| peptide chain release factor 1 [Enterococcus faecalis TX0102] gi|310631478|gb|EFQ14761.1| peptide chain release factor 1 [Enterococcus faecalis TX0635] gi|311288723|gb|EFQ67279.1| peptide chain release factor 1 [Enterococcus faecalis DAPTO 516] gi|311292929|gb|EFQ71485.1| peptide chain release factor 1 [Enterococcus faecalis TX0470] gi|315025302|gb|EFT37234.1| peptide chain release factor 1 [Enterococcus faecalis TX2137] gi|315030387|gb|EFT42319.1| peptide chain release factor 1 [Enterococcus faecalis TX4000] gi|315032691|gb|EFT44623.1| peptide chain release factor 1 [Enterococcus faecalis TX0017] gi|315035852|gb|EFT47784.1| peptide chain release factor 1 [Enterococcus faecalis TX0027] gi|315143714|gb|EFT87730.1| peptide chain release factor 1 [Enterococcus faecalis TX2141] gi|315148532|gb|EFT92548.1| peptide chain release factor 1 [Enterococcus faecalis TX4244] gi|315150059|gb|EFT94075.1| peptide chain release factor 1 [Enterococcus faecalis TX0012] gi|315151855|gb|EFT95871.1| peptide chain release factor 1 [Enterococcus faecalis TX0031] gi|315159264|gb|EFU03281.1| peptide chain release factor 1 [Enterococcus faecalis TX0312] gi|315161810|gb|EFU05827.1| peptide chain release factor 1 [Enterococcus faecalis TX0645] gi|315168548|gb|EFU12565.1| peptide chain release factor 1 [Enterococcus faecalis TX1341] gi|315170191|gb|EFU14208.1| peptide chain release factor 1 [Enterococcus faecalis TX1342] gi|315172490|gb|EFU16507.1| peptide chain release factor 1 [Enterococcus faecalis TX1346] gi|315574712|gb|EFU86903.1| peptide chain release factor 1 [Enterococcus faecalis TX0309B] gi|315579264|gb|EFU91455.1| peptide chain release factor 1 [Enterococcus faecalis TX0630] gi|315580976|gb|EFU93167.1| peptide chain release factor 1 [Enterococcus faecalis TX0309A] gi|323481494|gb|ADX80933.1| peptide chain release factor 1 [Enterococcus faecalis 62] gi|327535788|gb|AEA94622.1| peptide chain release factor RF1 [Enterococcus faecalis OG1RF] gi|329578086|gb|EGG59499.1| peptide chain release factor 1 [Enterococcus faecalis TX1467] Length = 357 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 107/347 (30%), Positives = 174/347 (50%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---DNLIL 72 + R L DP + + L +E + + + + + D L Sbjct: 5 LQSIEDRYEELGELLSDPAVISDTKRFMELSKEEANTRETVEVYRRYKQVVEGISDAEEL 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L L+ + + +E +L++ K +E + + L D + +E+ AGG E+ Sbjct: 65 LSENLDAEMAEMAKEELSDLKKEKEVLEDRIKILLLPKDPNDDKNIIMEIRGAAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MY ++AE + +K E LE + G K ++I G N + LK E G HR+ Sbjct: 125 LFAGDLFNMYQKYAEAQGWKAEVLEANVTGIGGYKEVIMMISGDNVFSKLKYESGAHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + +EIE+++ D R+D Y ASGAGGQHVN T SAVR Sbjct: 185 RVPSTESQGRIHTSTATVVVMP-EAEEVEIELADKDIRVDIYHASGAGGQHVNKTASAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q ERSQ KN+ +A +LRA++Y+ ++E + + K+ +G G Sbjct: 244 LTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYDQI--QQEAQSEYDANRKSAVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIIDALVLYDQ 347 >gi|169832291|ref|YP_001718273.1| peptide chain release factor 1 [Candidatus Desulforudis audaxviator MP104C] gi|238688348|sp|B1I6L2|RF1_DESAP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|169639135|gb|ACA60641.1| peptide chain release factor 1 [Candidatus Desulforudis audaxviator MP104C] Length = 355 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 112/347 (32%), Positives = 187/347 (53%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ + LN DP + Q+ + ++ + ++ +E + + ++ Sbjct: 5 LDHLEAKYEELNRLISDPVVIQDQERWRGYVKSHAEIGEVVAVYREYKRVAAEMDDARQM 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 EE D + + ++ ++ + + D + +E+ AG GG E+ Sbjct: 65 LREEQDAELRELAESEVEVLRERSDELRRRLRVLLLPKDPNDEKNVIIEIRAGTGGEEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY R+AE+R ++ E L +++ + GIK A +L++G AY LK E GVHR+ Sbjct: 125 LFAGDLLRMYLRYAERRGWRAEMLNVNETDLGGIKEAIVLLEGRGAYSELKFESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + +++EI D RID + ++G GGQ VNTT SAVR Sbjct: 185 RVPATESGGRIHTSAATVAVLP-EAEEVDVEIRPEDLRIDVFCSTGPGGQSVNTTQSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+P+G+VV CQ E+SQHKN+ +A +LRA+L + Q+++E I S KT++G G Sbjct: 244 VTHLPSGIVVSCQDEKSQHKNRDKAMKVLRARLLDKAQQEQQE--RIASSRKTQVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +VL GDL +F+ A + + Sbjct: 302 SERIRTYNF-PQNRVTDHRLNLTLYRLEEVLQGDLHEFVSALITSDQ 347 >gi|296111565|ref|YP_003621947.1| peptide chain release factor 1 [Leuconostoc kimchii IMSNU 11154] gi|295833097|gb|ADG40978.1| peptide chain release factor 1 [Leuconostoc kimchii IMSNU 11154] Length = 357 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 95/344 (27%), Positives = 174/344 (50%), Gaps = 8/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 V R LN + DP + + + L++E + + ++ + + + ++ Sbjct: 8 LQTVVDRYDELNEQLADPEVAGDGQKYMALLKEAGEMRDTVAAYTRYKQVIQEIQDAEDM 67 Query: 76 ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ + +E + L+ K + + L D + +E+ AGG ES +A Sbjct: 68 LDDDELAPLAKEDLNTLRPEKSDLEAQLKILMLPKDPNDDKNIIMEIRGAAGGDESSLFA 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LL MY R+AEK+++ ++ E G K ++I G N Y LK E G HR+ R+ Sbjct: 128 ADLLDMYRRYAEKQRWALSIIDETTTEVGGYKEVAIMISGDNVYSKLKFESGAHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS +++ V P ++ I+ E++ESD + +R+ GAGGQ+VN +AVR+ H Sbjct: 188 STETQGRVHTSTATVGVMPEFEE-IDFELAESDLEEEFFRSGGAGGQNVNKVSTAVRLVH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 PTG++V+ Q+ER+Q KN+ +A +L +++Y+ Q+ E E K+ +G G + Sbjct: 247 KPTGMMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNEAE--YAEKRKSAVGTGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R + +++GDL + + A + + Sbjct: 305 IRTYNY-PQNRVTDHRIGLTLNKLDRIMNGDLGEIIDAFVIADQ 347 >gi|238921196|ref|YP_002934711.1| peptide chain release factor 2, [Edwardsiella ictaluri 93-146] gi|238870765|gb|ACR70476.1| peptide chain release factor 2, putative [Edwardsiella ictaluri 93-146] gi|304560096|gb|ADM42760.1| Peptide chain release factor 2 [Edwardsiella tarda FL6-60] Length = 293 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 169/292 (57%), Positives = 211/292 (72%), Gaps = 1/292 (0%) Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L D LLELA+E DD E L + +++ +F + SGE DS D YL++ Sbjct: 1 MHQGLEDVSGLLELAVEADDEETFNEAVAELDLLDVKLGQLEFRRMFSGEYDSADCYLDI 60 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E +GE AG+KSAT+ I G AYGWL Sbjct: 61 QAGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESEGEVAGLKSATIKISGDYAYGWL 120 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQ Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQ 180 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E Sbjct: 181 HVNKTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAERQQMED 240 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K++IGWG QIRSYVL +KDLRT++E + VLDGDLD F++A+L Sbjct: 241 TKSDIGWGSQIRSYVLDD-SRIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 291 >gi|242280071|ref|YP_002992200.1| peptide chain release factor 1 [Desulfovibrio salexigens DSM 2638] gi|259585219|sp|C6BYQ4|RF1_DESAD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|242122965|gb|ACS80661.1| peptide chain release factor 1 [Desulfovibrio salexigens DSM 2638] Length = 357 Score = 217 bits (553), Expect = 2e-54, Method: Composition-based stats. Identities = 104/346 (30%), Positives = 176/346 (50%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72 ++ + L + DP ++ N + + L + ++ +E + L DN + Sbjct: 5 LEDIERSFMDLEQELADPEVYNNQERYRKVTMAHAELGDVVAAFREYKQLSADLEDNKEM 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + + E E ++ R+ E + L D + LE+ AG GG E+ Sbjct: 65 AKDSDPEIREMAEMEIAEIKDRLPKLEEELKLLLLPKDPMDGKNIILEIRAGTGGEEAAL 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE +K E + + G K I G Y +K E G HR+ R Sbjct: 125 FAADLFRMYSRFAESNGWKVEVMNSNPTGTGGFKEIIAAISGSRIYSMMKYESGTHRVQR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ + P + +++++ D RID +RASG GGQ VNTTDSA+RI Sbjct: 185 VPATETQGRIHTSAATVAIMP-EAEEVDVQVRNEDLRIDVFRASGPGGQSVNTTDSAIRI 243 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV CQ E+SQHKNKA+A +L ++L + E K+ + E + ++G G Sbjct: 244 THLPTGLVVICQDEKSQHKNKAKAMKVLCSRLLQAEQDKQHAE--MAEQRRAQVGSGDRS 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V++GD+ + +++ ++ + Sbjct: 302 ERIRTYNF-PQGRVTDHRINLTLYKLDAVIEGDMQELVESLISHYQ 346 >gi|289663473|ref|ZP_06485054.1| peptide chain release factor 1 [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289667596|ref|ZP_06488671.1| peptide chain release factor 1 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 361 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 112/345 (32%), Positives = 173/345 (50%), Gaps = 8/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA-ISFIKEIQDRLCDNLILLE 74 + +R L DP + N + + L RE L+ ++ E + + Sbjct: 9 LEALAERREELQHLLSDPDVVNNNDKFRTLSRELSQLEPVAVALEDETRAKADLAAAEAM 68 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + E +E + R++ + D + +LEV AG GG E+ +A Sbjct: 69 RSDPEMRELAEEEIAAAQARLEELDAQLALLLVPRDPRDDGNLFLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+AE++ +K E GE G K + G AY LK E G HR+ R+ Sbjct: 129 GDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ + P DD EI I+ +D ++DT+R+SGAGGQHVN T+SA+RITH Sbjct: 189 ATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDTFRSSGAGGQHVNKTESAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311 +P+GVVV+CQ ERSQH N+ +A L+A+L E E K A ++ K ++G G + Sbjct: 249 VPSGVVVECQTERSQHANRDKAMKRLKAQLAEAERSK--AAAAEAQTRKLQVGSGDRSQR 306 Query: 312 IRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R + ++++GDLD + L + Sbjct: 307 IRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIARLLHEHQ 350 >gi|260433480|ref|ZP_05787451.1| peptide chain release factor 1 [Silicibacter lacuscaerulensis ITI-1157] gi|260417308|gb|EEX10567.1| peptide chain release factor 1 [Silicibacter lacuscaerulensis ITI-1157] Length = 351 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 117/344 (34%), Positives = 173/344 (50%), Gaps = 12/344 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + QR +L D ++ L +E L + I + D + Sbjct: 7 LEQITQRFQYLEAAMSDGASGGDIA---ALAKEYSDLKPVVEQIAAWRQLRADLAEAEAM 63 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + +E L+ Q L AD+ A LE+ G GG E+ +A Sbjct: 64 LGDPDMKELAEEEIPQLKARIPEAEHALQLALLPKDAADARPAMLEIRPGTGGDEAALFA 123 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE R ++ E +E E GIK IKG N + LK E GVHR+ R+ Sbjct: 124 GDLLRMYQRYAEARGWQFEIIEEQHTELGGIKEVVAHIKGDNVFARLKYESGVHRVQRVP 183 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P + ++I+I +D RIDT R+SGAGGQHVNTTDSAVRITH Sbjct: 184 ETESGGRIHTSAATVAVLP-EAEDVDIQIDPNDIRIDTMRSSGAGGQHVNTTDSAVRITH 242 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV E+SQH+N+ A +L+ +LY+LE Q+ + +++G G + Sbjct: 243 LPTGIVVTSS-EKSQHRNREIAMQVLKTRLYDLERQRIDSER--SADRASQVGSGDRSER 299 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++ GDLD+ + A A + Sbjct: 300 IRTYNF-PQGRMTDHRINLTLYKLDQIMQGDLDEVIDALTADDQ 342 >gi|51245661|ref|YP_065545.1| peptide chain release factor 2 [Desulfotalea psychrophila LSv54] gi|50876698|emb|CAG36538.1| probable peptide chain release factor 2 [Desulfotalea psychrophila LSv54] Length = 285 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 159/285 (55%), Positives = 207/285 (72%) Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +LLE+A EE D I QE + L + + E + GE DS +A + +HAGAGGTE+ Sbjct: 1 MLLEMAAEEGDQEIEQEIALKLGSFANALAAIELECMFIGEHDSCNAIISIHAGAGGTEA 60 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDW ++LLRMY RWAE+ KFKTE L++ G+EAG KS T+LIKG AYG+L+ E G+HRL Sbjct: 61 QDWTDILLRMYLRWAERHKFKTEILDLLPGDEAGTKSITILIKGQWAYGYLRSELGIHRL 120 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VRISP+D++ RRHTSF+S+ V P +D++++++I E D R+DTYRASGAGGQHVN TDSA+ Sbjct: 121 VRISPFDTSGRRHTSFASVMVMPELDNTVDVDIDEKDLRVDTYRASGAGGQHVNKTDSAI 180 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+TH+PTGVVVQCQ ERSQH+NK A ML A++Y+LE QK+ + K I WG Sbjct: 181 RLTHLPTGVVVQCQNERSQHRNKEMAMKMLIAQIYQLEKQKKADQQEGLHGEKKGISWGS 240 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 QIRSYVLQPY+++KD RT+ E + VLDG LD F+KA L K Sbjct: 241 QIRSYVLQPYRLIKDHRTDFEAGNVDAVLDGGLDGFIKAFLLWGK 285 >gi|212213085|ref|YP_002304021.1| peptide chain release factor 2 [Coxiella burnetii CbuG_Q212] gi|212011495|gb|ACJ18876.1| bacterial peptide chain release factor 2 [Coxiella burnetii CbuG_Q212] Length = 289 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 160/282 (56%), Positives = 212/282 (75%), Gaps = 1/282 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 + +L+ +E D ++ + + + ++++ + +F+ + SGE DSN+AYL++ AG+GGTE+Q Sbjct: 1 MAQLSKQEKDTDLITDLNKDFKQLEKTIAEMEFQRMFSGEMDSNNAYLDIQAGSGGTEAQ 60 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA MLLRMY RW +K F T +E GE AGIKSAT+ G AYGWL+ E GVHRLV Sbjct: 61 DWAEMLLRMYLRWGDKHGFTTTLMEASPGEVAGIKSATIEFTGSYAYGWLRSETGVHRLV 120 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS +RRHTSF+S++V P +DD IEIEI+ ++ RIDTYRASGAGGQHVN TDSAVR Sbjct: 121 RKSPFDSGNRRHTSFASVFVSPEIDDDIEIEINPAELRIDTYRASGAGGQHVNRTDSAVR 180 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+P+G+VVQCQ +RSQHKNKAQA LRAKLYE+E+ K++E + E+SK+EI WG Q Sbjct: 181 ITHLPSGIVVQCQNDRSQHKNKAQAMKQLRAKLYEMEMMKQQEKQALLEASKSEISWGNQ 240 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 IRSYVL VKDLRT +E ++ VLDGD+D F++A L Sbjct: 241 IRSYVLD-ASRVKDLRTGVETSNTQAVLDGDIDLFIEACLKQ 281 >gi|29840418|ref|NP_829524.1| peptide chain release factor 1 [Chlamydophila caviae GPIC] gi|33301431|sp|Q822M2|RF1_CHLCV RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|29834767|gb|AAP05402.1| peptide chain release factor 1 [Chlamydophila caviae GPIC] Length = 361 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 111/340 (32%), Positives = 178/340 (52%), Gaps = 11/340 (3%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLELAL 77 +RL + K +P +++N E L +E L + ++ + L D+ L Sbjct: 10 KRLEEVEVKISNPEIFENPKEYSSLSKEHARLSELKNVYDKVLGQEKILNDDKEALAQEK 69 Query: 78 EEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 + + ++L+E + ++ + + D + +E+ AG GG E+ + Sbjct: 70 DPEMIAMLEEGIQLGKAEVDKLYKVLENLLVPPDPDDDLNVIMELRAGTGGDEAALFVGD 129 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 +RMY +A + +K E L + + G K + I G L+ E G HR+ R+ Sbjct: 130 CVRMYHLYASTKGWKYEVLSASESDIGGYKEYVMGISGAAVKRLLQYEAGTHRVQRVPET 189 Query: 197 DSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 ++ R HTS ++ V P +D E+ I E D +IDT+RASGAGGQHVN TDSAVRITH+ Sbjct: 190 ETQGRVHTSAITVAVLPEPAEDDEEVFIDEKDLKIDTFRASGAGGQHVNVTDSAVRITHL 249 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTGVVV CQ ERSQHKNKA+A +L+A++ + E+Q+R++ A+ S ++G G +I Sbjct: 250 PTGVVVTCQDERSQHKNKAKAMRILKARIRDAEMQRRQKEASAMRS--AQVGSGDRSERI 307 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 R+Y V D R + + V++GDLD A ++ Sbjct: 308 RTYNFS-QNRVTDHRIGLTLYNLDKVMEGDLDAITSALVS 346 >gi|304440460|ref|ZP_07400349.1| peptide chain release factor RF1 [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371212|gb|EFM24829.1| peptide chain release factor RF1 [Peptoniphilus duerdenii ATCC BAA-1640] Length = 355 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 117/346 (33%), Positives = 185/346 (53%), Gaps = 12/346 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN-- 69 +F+ R L + + N + E L+ + +E + D Sbjct: 1 MFENIQVFEDRYVELEKDLVNVDVINNSALYQKTAIEHAELEPIVHKYREYKKLEEDLSG 60 Query: 70 -LILLELALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 LL L++D ++++ N+++ + E + + D+ + +E+ AGAGG Sbjct: 61 NKELLTEDLDDDMLQLVKDDIKNIEQELEKVTEELKRLLVPKDPNDNKNVIVEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A +LLR Y +AEK FKT+ + ++ G K +I+G AY LK E GV Sbjct: 121 DEAALFAGVLLRQYLMYAEKCGFKTDIMSTNEIGIGGYKEVVFMIEGKGAYSKLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S+ R HTS +++ V P + +EIEI SD R+D +R+SG GGQ VNTTD Sbjct: 181 HRVQRVPETESSGRIHTSTATVAVLP-EAEDVEIEIDPSDIRVDVFRSSGNGGQSVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+V+ CQ E+SQ KNK +A +L+ KLY+LELQK+ + + +++IG Sbjct: 240 SAVRITHLPTGIVISCQDEKSQLKNKEKAMKILKTKLYDLELQKQAQE--LSAEKRSQIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G +IR+Y P V D R + + +GDLD+ + A Sbjct: 298 SGDRSERIRTYNY-PQGRVTDHRIGLTSHRIDAINNGDLDEIIDAL 342 >gi|78046531|ref|YP_362706.1| peptide chain release factor 1 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|119361637|sp|Q3BX07|RF1_XANC5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|78034961|emb|CAJ22606.1| peptide chain release factor 1 [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 361 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 112/345 (32%), Positives = 174/345 (50%), Gaps = 8/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R L DP + N + L RE L+ ++E D L Sbjct: 9 LEALAERREELQHLLSDPDVVGNNDTFRTLSRELSQLEPVAMALEEEARAKADLATAEAL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQF-ESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E Q +++ + + D + +LEV AG GG E+ +A Sbjct: 69 RNDPEMRELAEEEIAAAQARLEQLDAQLASLLVPRDPRDDGNLFLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+AE++ +K E GE G K + G AY LK E G HR+ R+ Sbjct: 129 GDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ + P DD EI I+ +D ++DT+R+SGAGGQHVN T+SA+RITH Sbjct: 189 ATESQGRIHTSAATVAIIPEADDVEEITINPADLKVDTFRSSGAGGQHVNKTESAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311 +P+GVVV+CQ ERSQH N+ +A L+A+L + E K A ++ K ++G G + Sbjct: 249 VPSGVVVECQTERSQHANRDKAMKRLKAQLLDAERSK--AAAAEAQTRKLQVGSGDRSQR 306 Query: 312 IRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R + ++++GDLD + L + Sbjct: 307 IRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIGRLLHEHQ 350 >gi|309775307|ref|ZP_07670316.1| peptide chain release factor 1 [Erysipelotrichaceae bacterium 3_1_53] gi|308916970|gb|EFP62701.1| peptide chain release factor 1 [Erysipelotrichaceae bacterium 3_1_53] Length = 357 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 110/346 (31%), Positives = 176/346 (50%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72 + V R +N P + + L RE+ L + E ++ L D L Sbjct: 8 LEGMVNRYHEINEMMMSPEIVTDSKMLAKLGREQADLTQVVETYTEYKNSVNALDDAKAL 67 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L +E E + +I+ + + + DS++A +E+ AGG E Sbjct: 68 LMEEDKEIKEMAKMEIEELEPKIEEYLGKLEILLIPKDPNDSHNAIVEIRGAAGGDEGNI 127 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AE + +K E +E+ D E G + ++KG YG LK E G HR+ R Sbjct: 128 FAGDLYRMYSKFAESQGWKIEIVEMDDCEAGGFSLVSFMVKGDGVYGKLKFESGSHRVQR 187 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS +++ V P ++ + +I +D ++T RASGAGGQH+N TDSAVRI Sbjct: 188 VPKTESQGRIHTSTATVLVTP-EIEAEDFDIDMNDLEVETMRASGAGGQHINKTDSAVRI 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 H PTG+VV+CQ RSQH+N+A A +R+++YE +K EE + +++IG G Sbjct: 247 VHKPTGIVVKCQDGRSQHENRATALMTIRSRVYEEHQRKLEEEQGV--ERRSKIGTGDRA 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R +++G + D + A L+ + Sbjct: 305 EKIRTYNY-PQNRVTDHRIGYTVNQLDRIMEGRMQDLLDALLSADQ 349 >gi|167041537|gb|ABZ06286.1| putative peptidyl-tRNA hydrolase domain protein [uncultured marine microorganism HF4000_008B14] Length = 360 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 106/352 (30%), Positives = 177/352 (50%), Gaps = 12/352 (3%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD D + R + + P + + + + L RER L+ + + + Sbjct: 3 SIFDKLDPVLTRYNEIEEAMGRPEVATDFEQVQTLARERASLETLVDIAHRYRKLADEQG 62 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAG 126 L L E D + + D L + +VE + L D D +E+ +GAG Sbjct: 63 DLNALLQEGGDAELTKMAKDELDETEKQVEQLAEELKIALLPKDPNDDRDVIVEIRSGAG 122 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A+ L R YTR+A+ ++ + ++ + + G+ I+G A+ LK E+G Sbjct: 123 GNEASLFASDLYRAYTRYAQLHHWQVDVMDSNPSDLGGLNKIVFGIQGKGAFSRLKYERG 182 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ ++ R HTS +++ V D ++I+IS D RID + A G GGQ+VN Sbjct: 183 VHRVQRVPDTEAQGRIHTSTATVAVLA-RADEVDIKISPDDLRIDIFHAGGHGGQNVNKV 241 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +AVRI + PTG+ V CQ ERSQ+KNK +A MLRAKLY+ E +K E+ ++++ Sbjct: 242 ATAVRIVYEPTGLTVICQDERSQYKNKTKAMAMLRAKLYDAEQEKIAAER--SETRRSQV 299 Query: 307 G---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P + D R ++DG+LDD + + + ++ Sbjct: 300 GNADRSEKIRTYNY-PQDRITDHRVGASFHGIPRIMDGELDDLIDSLVTWEQ 350 >gi|257421856|ref|ZP_05598846.1| peptide chain release factor [Enterococcus faecalis X98] gi|257163680|gb|EEU93640.1| peptide chain release factor [Enterococcus faecalis X98] gi|315155439|gb|EFT99455.1| peptide chain release factor 1 [Enterococcus faecalis TX0043] Length = 357 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 107/347 (30%), Positives = 174/347 (50%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---DNLIL 72 + R L DP + + L +E + + + + + D L Sbjct: 5 LQSIEDRYEELGELLSDPAIISDTKRFMELSKEEANTRETVEVYRRYKQVVEGISDAEEL 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L L+ + + +E +L++ K +E + + L D + +E+ AGG E+ Sbjct: 65 LSENLDAEMAEMAKEELSDLKKEKEVLEDRIKILLLPKDPNDDKNIIMEIRGAAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MY ++AE + +K E LE + G K ++I G N + LK E G HR+ Sbjct: 125 LFAGDLFNMYQKYAEAQGWKAEVLEANVTGIGGYKEVIMMISGDNVFSKLKYESGAHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + +EIE+++ D R+D Y ASGAGGQHVN T SAVR Sbjct: 185 RVPSTESQGRIHTSTATVVVMP-EAEEVEIELADKDIRVDIYHASGAGGQHVNKTASAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q ERSQ KN+ +A +LRA++Y+ ++E + + K+ +G G Sbjct: 244 LTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYDQI--QQEAQSEYDANRKSAVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIIDALVLYDQ 347 >gi|163756580|ref|ZP_02163692.1| peptide chain release factor 1 [Kordia algicida OT-1] gi|161323474|gb|EDP94811.1| peptide chain release factor 1 [Kordia algicida OT-1] Length = 357 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 95/342 (27%), Positives = 164/342 (47%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72 QR +N P + + L +E + L + KE+ D + + + Sbjct: 5 LQIVKQRFDEVNDLIIQPDIIADQKRYVQLNKEYKDLKILVEKRDVYKELLDNISEAEEI 64 Query: 73 LELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 + + + + + D + E + + DS + +EV AG GG E+ Sbjct: 65 IADGSDAEMVEMAKIQMDEAKAALPALEEEIKVLLIPKDPEDSKNVVVEVRAGTGGDEAS 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYT++ E R + ++ +G G K + G + YG +K E GVHR+ Sbjct: 125 IFAGDLHRMYTKYCEGRGWNVSVVDYSEGTSGGFKEIIFEVSGEDVYGTMKFEAGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P ++ + +D RI+ ++G GGQ VNTT SA+R Sbjct: 185 RVPQTETQGRVHTSAATVMVLPEAEEFDVE-LDMNDVRIERTTSTGPGGQSVNTTYSAIR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 + H P+G+VV CQ ++S HKN +A +LR++LYE EL+K+ +A K+ + G + Sbjct: 244 LHHGPSGLVVSCQDQKSSHKNLEKALKVLRSRLYEKELEKK--LAADSARRKSMVSSGDR 301 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P V D R + S++++GD+ + Sbjct: 302 SAKIRTYNY-PQGRVTDHRIGLTLYDLSNIMNGDIQKIIDEL 342 >gi|21230341|ref|NP_636258.1| peptide chain release factor 1 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|188992877|ref|YP_001904887.1| peptide chain release factor 1 [Xanthomonas campestris pv. campestris str. B100] gi|24418637|sp|Q8PC68|RF1_XANCP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|229576663|sp|B0RUA5|RF1_XANCB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|21111894|gb|AAM40182.1| peptide chain release factor 1 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|167734637|emb|CAP52847.1| peptide chain release factor 1 [Xanthomonas campestris pv. campestris] Length = 361 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 113/345 (32%), Positives = 175/345 (50%), Gaps = 8/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R L DP + N + + L RE L+ ++E D + Sbjct: 9 LEALAERREELQHLLSDPEVVSNNDKFRSLSRELSQLEPVALAMQEEARAKADLSAAEAM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E Q E++ + + D + +LEV AG GG E+ +A Sbjct: 69 RNDPEMRELAEEEILAAQARLDELDAQLALLLVPRDPRDEGNLFLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+AE++ +K E GE G K + G AY LK E G HR+ R+ Sbjct: 129 GDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ + P DD EI I+ +D ++DT+R+SGAGGQHVN T+SA+RITH Sbjct: 189 ATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDTFRSSGAGGQHVNKTESAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311 +P+GVVV+CQ ERSQH N+ +A L+A+L E E K A ++ K ++G G + Sbjct: 249 VPSGVVVECQTERSQHANRDKAMKRLKAQLVEAERSK--AAAAEAQTRKLQVGSGDRSQR 306 Query: 312 IRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R + ++++GDLD + L + Sbjct: 307 IRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIARLLHEHQ 350 >gi|167586751|ref|ZP_02379139.1| peptide chain release factor 2 [Burkholderia ubonensis Bu] Length = 248 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 148/247 (59%), Positives = 196/247 (79%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK Sbjct: 1 MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 +AT+ + G AYG+L+ E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+E++ + Sbjct: 61 NATVKVSGEYAYGFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 E++KR+ + ESSKT++GWG QIRSYVL VKDLRTN+E ++ VLDGDLDDF Sbjct: 181 AEMRKRQAEQDKLESSKTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTKAVLDGDLDDF 239 Query: 347 MKATLAI 353 + A+L Sbjct: 240 ISASLKQ 246 >gi|332526537|ref|ZP_08402649.1| peptide chain release factor 1 [Rubrivivax benzoatilyticus JA2] gi|332110805|gb|EGJ10982.1| peptide chain release factor 1 [Rubrivivax benzoatilyticus JA2] Length = 351 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 110/333 (33%), Positives = 181/333 (54%), Gaps = 10/333 (3%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL+ L+ DP + +V + L RE+ + + + + R D E+ + E D Sbjct: 2 RLAELDALLADPQVAADVKRLRTLSREQSEVADVVGRWRRYLQREQDLAAAREMLVAESD 61 Query: 82 CSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQDWANML 137 + + + ++ + E D+ +A++E+ AG GG ES +A L Sbjct: 62 AEMAAMAEQEVVDAEADLARLEHELQLALIPRDPDDARNAFVEIRAGTGGDESALFAGDL 121 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY R+ E++ ++ E + + E G K L + G + +G L+ E G HR+ R+ + Sbjct: 122 ARMYLRYFERQGWRVEVMSASESELGGYKELVLKVDGTDVFGTLRFESGGHRVQRVPATE 181 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 + R HTS ++ V P D++ E++++ ++ RIDT+RASGAGGQHVN TDSA+RITH+PT Sbjct: 182 AQGRIHTSACTVAVMPEPDEAEEVQLNPAELRIDTFRASGAGGQHVNKTDSAIRITHLPT 241 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314 G+V +CQ +RSQH+NKA+A +L A+L E + E A + K+ +G G +IR+ Sbjct: 242 GIVAECQDDRSQHRNKAKAMAVLAARLR--EKDRAERAAKEAATRKSLVGSGDRSDRIRT 299 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 Y P + D R N+ ++DG+LDD + Sbjct: 300 YNF-PQGRLTDHRINLTLYKLGQIMDGELDDVV 331 >gi|71083436|ref|YP_266155.1| peptide chain release factor 2 [Candidatus Pelagibacter ubique HTCC1062] gi|71062549|gb|AAZ21552.1| bacterial peptide chain release factor 2 (RF-2) [Candidatus Pelagibacter ubique HTCC1062] Length = 284 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 172/280 (61%), Positives = 225/280 (80%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 + ELALEE + S++ E ++++ +K + + + LS E DS D Y+E+HAGAGGTESQ Sbjct: 1 MNELALEEKNQSVINEVLESIKNLKKLAKKNETKCFLSNETDSLDCYIEIHAGAGGTESQ 60 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA ML RMY +W++ + FK+E + H GEEAGIKS+T+ I+G +GWLK E G+HRLV Sbjct: 61 DWAEMLRRMYLKWSDIKNFKSELISEHKGEEAGIKSSTIKIEGDYVFGWLKAESGIHRLV 120 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RISP+DS +RRHTSF+SIW+YPVVD++IEIEI+E D RIDTYR+SGAGGQHVNTTDSAVR Sbjct: 121 RISPFDSGARRHTSFASIWIYPVVDENIEIEINEKDLRIDTYRSSGAGGQHVNTTDSAVR 180 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+P+ +VVQCQ ERSQHKNK NML+A+LY+ EL+K+E+ + ESSK+EIGWG Q Sbjct: 181 ITHLPSKIVVQCQNERSQHKNKDTCMNMLKARLYDFELKKKEQESQTVESSKSEIGWGHQ 240 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL PY+MVKD RTN E ++P VLDG++DDF++++L Sbjct: 241 IRSYVLHPYRMVKDNRTNFESSNPDKVLDGEIDDFLESSL 280 >gi|66769665|ref|YP_244427.1| peptide chain release factor 1 [Xanthomonas campestris pv. campestris str. 8004] gi|81304380|sp|Q4URB6|RF1_XANC8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|66574997|gb|AAY50407.1| peptide chain release factor 1 [Xanthomonas campestris pv. campestris str. 8004] Length = 361 Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats. Identities = 113/345 (32%), Positives = 175/345 (50%), Gaps = 8/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R L DP + N + + L RE L+ ++E D + Sbjct: 9 LEALAERREELQHLLSDPEVVSNNDKFRSLSRELSQLEPVALAMQEEARAKADLSAAEAM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E Q E++ + + D + +LEV AG GG E+ +A Sbjct: 69 RNDPEMRELAEEEILAAQARLDELDAQLALLLVPRDPRDEGNLFLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+AE++ +K E GE G K + G AY LK E G HR+ R+ Sbjct: 129 GDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ + P DD EI I+ +D ++DT+R+SGAGGQHVN T+SA+RITH Sbjct: 189 ATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDTFRSSGAGGQHVNKTESAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311 +P+GVVV+CQ ERSQH N+ +A L+A+L E E K A ++ K ++G G + Sbjct: 249 VPSGVVVECQTERSQHANRDKAMKRLKAQLVEAERSK--AAAAKAQTRKLQVGSGDRSQR 306 Query: 312 IRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R + ++++GDLD + L + Sbjct: 307 IRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIARLLHEHQ 350 >gi|154174699|ref|YP_001407404.1| peptide chain release factor 1 [Campylobacter curvus 525.92] gi|166223540|sp|A7GW12|RF1_CAMC5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|112802322|gb|EAT99666.1| peptide chain release factor 1 [Campylobacter curvus 525.92] Length = 355 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 114/353 (32%), Positives = 175/353 (49%), Gaps = 15/353 (4%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 + L D R + ++ DP++ ++ + L +E+ ++ + + L Sbjct: 4 DKLRPFLD------RYNEISALLGDPNIINDIEKMTKLSKEQSSIEPIKNAASQYLQTLD 57 Query: 68 DNLILLELALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D L + + +E R + + L D + +LE+ AG G Sbjct: 58 DIEENKALLDDAELGELAREELKSAQIRKEELENEIKILLLPKDPNDDKNIFLEIRAGTG 117 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ + L Y R+A+ R +K E + +G G K LLIKG AY LK E G Sbjct: 118 GDEAALFVGDLFNAYIRYADLRGYKFEIVSQSEGSAGGFKEIILLIKGKGAYSRLKFEGG 177 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS ++ + P V+DS I+ +D RID R+SG GGQ VNTT Sbjct: 178 THRVQRVPETESQGRVHTSAVTVAIMPEVEDSEIE-INPNDLRIDVMRSSGHGGQSVNTT 236 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIPTG+VV Q +SQHKNK A +L+A+LY E+Q+ E IA K+++ Sbjct: 237 DSAVRITHIPTGLVVTNQDGKSQHKNKEAAMKVLKARLY--EMQEAERIAKETSERKSQV 294 Query: 307 GWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLAIKK 355 G G +IR+Y P + D R N+ ++ G L D+ ++ +A + Sbjct: 295 GTGDRSGRIRTYNF-PQNRISDHRINLTLYRLDAIMAGGLFDEIIEPLIAHHQ 346 >gi|189461883|ref|ZP_03010668.1| hypothetical protein BACCOP_02549 [Bacteroides coprocola DSM 17136] gi|189431477|gb|EDV00462.1| hypothetical protein BACCOP_02549 [Bacteroides coprocola DSM 17136] Length = 369 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 95/353 (26%), Positives = 160/353 (45%), Gaps = 18/353 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V R ++T DP++ + L +E + L + + KE L + Sbjct: 11 LDGLVARFEEVSTLITDPNVISDQKRYVKLTKEYKELGDLMQARKEYLQCLNGLEEAKMM 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYLEVHAGAGGTESQD 132 E D + + ++ + + D +A LE+ G GG E+ Sbjct: 71 MAENDPEMKEMAREEAAACEARLPQLEEEIKLLLVPADPQDDRNAILEIRGGTGGDEAAI 130 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++ E + +K E ++G G K + G YG LK E GVHR+ R Sbjct: 131 FAGDLFRMYSKYCESKGWKLEVSSANEGAAGGFKEIICSVTGDKVYGTLKYESGVHRVQR 190 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +S+ V P + I+E + + DT+R+ GAGGQ+VN +S VR+ Sbjct: 191 VPATETQGRVHTSAASVAVLPEAEPFDVE-INEGEIKWDTFRSGGAGGQNVNKVESGVRL 249 Query: 253 THIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 + ++++C + R Q KNK +A + LR +Y+ E QK I +I KT Sbjct: 250 RYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRKT 307 Query: 305 EIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + G + IR+Y P + D R N + + +DGD+ D + + + Sbjct: 308 MVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 359 >gi|254488030|ref|ZP_05101235.1| peptide chain release factor 1 [Roseobacter sp. GAI101] gi|214044899|gb|EEB85537.1| peptide chain release factor 1 [Roseobacter sp. GAI101] Length = 371 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 116/341 (34%), Positives = 169/341 (49%), Gaps = 12/341 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 QR FL + + L +E L + I+ + L D + Sbjct: 27 LAQITQRFQFLEASMSAG---SDGADFAKLAKEYADLRPVVEQIEGYRQLLQDMDDARAM 83 Query: 76 ALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E I Q L AD+ A LE+ G GG E+ +A Sbjct: 84 LKDPEMAELAEEELPRLKAEIPKAEASLQLALLPKDAADTKPAMLEIRPGTGGDEAALFA 143 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE + +K + +E E G+K IKG N + LK E GVHR+ R+ Sbjct: 144 ADLLRMYQRYAEAQGWKFDLIEEQLTELGGVKEVVAHIKGQNVFARLKYESGVHRVQRVP 203 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P + ++I + +D RIDT R+SGAGGQHVNTTDSAVRITH Sbjct: 204 STESGGRIHTSAATVAVLP-EAEDVDIHVDPNDLRIDTMRSSGAGGQHVNTTDSAVRITH 262 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV E+SQH+N+ A +L+A+LY+ E Q+ + ++G G + Sbjct: 263 IPTGIVVTSS-EKSQHRNREIAMQVLKARLYDAERQRVDSER--SADRAAQVGSGDRSER 319 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IR+Y P + D R N+ +L GDLD+ + A A Sbjct: 320 IRTYNF-PQGRMTDHRINLTLYRLDAILQGDLDEIIDALTA 359 >gi|167563347|ref|ZP_02356263.1| peptide chain release factor 2 [Burkholderia oklahomensis EO147] gi|167570518|ref|ZP_02363392.1| peptide chain release factor 2 [Burkholderia oklahomensis C6786] Length = 248 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 149/247 (60%), Positives = 196/247 (79%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK Sbjct: 1 MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 +AT+ + G AYG+L+ E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+E++ + Sbjct: 61 NATIKVSGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 EL+KR+ + ESSKT++GWG QIRSYVL VKDLRTN+E ++ VLDGDLDDF Sbjct: 181 AELRKRQAEQDKLESSKTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTKAVLDGDLDDF 239 Query: 347 MKATLAI 353 + A+L Sbjct: 240 IGASLKQ 246 >gi|296268873|ref|YP_003651505.1| peptide chain release factor 1 [Thermobispora bispora DSM 43833] gi|296091660|gb|ADG87612.1| peptide chain release factor 1 [Thermobispora bispora DSM 43833] Length = 350 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 121/343 (35%), Positives = 175/343 (51%), Gaps = 6/343 (1%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 + D V+ + L K DP + + +A+ + L I+ +E+Q D Sbjct: 1 MNLDELVKEYADLEQKLADPAVHADQAKARKYGKRYAELTPIITTYRELQSVREDLEAAR 60 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 ELA E+ + + + + + D D +E+ AG GG ES + Sbjct: 61 ELAREDPAFAEEAAELEAKIPELEDRLKRLL--IPKDPNDGKDIIMEIKAGEGGEESALF 118 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWLKGEQGVHRLVR 192 A LLRMY R+AE+ +K E + E G K T+ IK A+ LK E GVHR+ R Sbjct: 119 AADLLRMYLRYAERLGYKAEIISAQPSELGGYKDVTISIKGKEGAWSRLKYEGGVHRVQR 178 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS + + VYP + I+++I +D RID +R+SG GGQ VNTTDSAVRI Sbjct: 179 VPVTESQGRIHTSAAGVLVYP-EAEEIDVQIDPNDLRIDVFRSSGPGGQSVNTTDSAVRI 237 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311 THIPTGVVV CQ E+SQ +NK A +LRA+L L Q+ E A S+ + + Sbjct: 238 THIPTGVVVSCQNEKSQLQNKEAAMRILRARLLALAQQEAEAAAAAERRSQVRTVDRSER 297 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P + D R + + VLDGDLD ++A + + Sbjct: 298 IRTYNF-PENRISDHRVGYKAYNLDQVLDGDLDGVIQALIDAE 339 >gi|91786752|ref|YP_547704.1| peptide chain release factor 1 [Polaromonas sp. JS666] gi|119361575|sp|Q12F86|RF1_POLSJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|91695977|gb|ABE42806.1| bacterial peptide chain release factor 1 (bRF-1) [Polaromonas sp. JS666] Length = 373 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 114/353 (32%), Positives = 174/353 (49%), Gaps = 17/353 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + RL L++ + ++ + L RE + R D + Sbjct: 9 LDRQLLRLHELDSLLSATDVVSDLDRFRALTREHAEASVVAEQYTRLTSREADLASAEGM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130 E D + ++ + Q + D+ A++E+ AG GG ES Sbjct: 69 LAEAKDDPEMAAMAEEEIAAAKLDIAQLDEALQLMLIPKDPDDARAAFIEIRAGTGGDES 128 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA------YGWLKGE 184 +A L RMYTR+AE+ +++ E + E G K L + GP YG L+ E Sbjct: 129 ALFAGDLFRMYTRFAERNRWQVEIISESPSELGGYKEVVLRMDGPTDATGVGVYGKLRFE 188 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G HR+ R+ ++ R HTS ++ V P D+++ I+I+ +D RIDTYRASGAGGQH+N Sbjct: 189 SGGHRVQRVPATETQGRIHTSACTVAVLPEPDEAVAIQINPADLRIDTYRASGAGGQHIN 248 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TDSAVRITHIPTG+V +CQ +RSQH+NKA+A +L A++ +E + E A K Sbjct: 249 KTDSAVRITHIPTGIVAECQDDRSQHRNKAKALQVLSARI--VEKDRSERAAKDAAMRKG 306 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +G G +IR+Y P + D R N+ +++GDL D + A + Sbjct: 307 LVGSGDRSDRIRTYNF-PQGRLTDHRINLTLYKLLAIMEGDLGDVITALQVAR 358 >gi|163754877|ref|ZP_02161998.1| peptide chain release factor RF-2 [Kordia algicida OT-1] gi|161324944|gb|EDP96272.1| peptide chain release factor RF-2 [Kordia algicida OT-1] Length = 316 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 143/307 (46%), Positives = 210/307 (68%), Gaps = 2/307 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M++ + + E+ D + D +L E E D + K+ E +F Sbjct: 1 MKKLRGEKKWVGDYNEVADLIGDLEVLYEFYKEGDASEEEVTAQFEKTKTKI--EDLEFR 58 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++LS E DS A L+V AGAGGTES DWA+ML+RMY +AEK+ +K + L +G+ AGI Sbjct: 59 NMLSDEGDSMSAVLQVTAGAGGTESCDWASMLMRMYLMFAEKQGYKVKELNYQEGDVAGI 118 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ TL I+G A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDD+IEI+I+ Sbjct: 119 KTVTLEIEGDYAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIDINP 178 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D I T R+SGAGGQ+VN ++ V++TH P+G+ + C + RSQH N+ +A ML+++LY Sbjct: 179 ADIEITTARSSGAGGQNVNKVETKVQLTHKPSGIQISCSETRSQHDNRTRAMQMLKSQLY 238 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+K+ E + E+ K +I WG QIR+YV+ PY++VKD+RT E + V++G +D+ Sbjct: 239 EIELKKQMEARDDIEAGKMKIEWGSQIRNYVMHPYKLVKDVRTAHETGNVDAVMNGYIDE 298 Query: 346 FMKATLA 352 F+KA L Sbjct: 299 FLKAYLM 305 >gi|305664895|ref|YP_003861182.1| peptide chain release factor 1 [Maribacter sp. HTCC2170] gi|88707725|gb|EAQ99965.1| peptide chain release factor 1 [Maribacter sp. HTCC2170] Length = 358 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 101/346 (29%), Positives = 173/346 (50%), Gaps = 12/346 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCD 68 + D + QR ++ P + + L +E + L + + E+ + + + Sbjct: 1 MIDKLNIVKQRFDEVSDLIIQPDVISDQKRYVQLTKEYKDLKDLMEKRDAYVELTNNIQE 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 ++ + + + + D + E + + D+ D +E+ AG GG Sbjct: 61 AEEIISDGSDAEMLEMAKMQLDEAKTALPKLEEDIKLMLIPKDPEDAKDVVVEIRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYT++ E R +KT +++ +G G K + G + YG LK E GV Sbjct: 121 DEASIFAGDLFRMYTKYCEGRGWKTNVIDLSEGTSGGYKEIQFEVSGADVYGTLKFEAGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS +++ V P +D I D RID + +SG GGQ VNTT Sbjct: 181 HRVQRVPQTETQGRVHTSAATVMVLPEAEDFDVQ-IDPKDVRIDFFCSSGPGGQSVNTTY 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL +++E +++ Sbjct: 240 SAVRLTHIPTGLVAQCQDQKSQHKNKDKAFRVLRSRLYDLELARKQEE--DAAKRNSQVS 297 Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G + IR+Y V D R + ++++GD+ + Sbjct: 298 SGDRSAKIRTYNYA-QGRVTDHRIGLTLYDLQNIINGDIQKIIDEL 342 >gi|289163904|ref|YP_003454042.1| peptide chain release factor 1 [Legionella longbeachae NSW150] gi|288857077|emb|CBJ10892.1| peptide chain release factor 1 [Legionella longbeachae NSW150] Length = 362 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 113/343 (32%), Positives = 181/343 (52%), Gaps = 9/343 (2%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNL 70 ++R + + + + + K L +E L+ + + +D + Sbjct: 7 LKLQQMLERYQEVGRLLSEASVIADQNQFKTLSKEYAQLEPIATCYETYIEAKDNVSSLE 66 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LL +E +E + ++++ E Q+ + D + YLE+ AG GG E+ Sbjct: 67 ELLAGEDKELAAMADEELASAKRQVEELDEQLQWHLIPKDPDDERNIYLEIRAGTGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+AE++ ++ E + GE G K I G Y LK E G HR+ Sbjct: 127 AIFAGDLYRMYIRYAEEQGWQQELISASHGEHGGYKEIITRISGNAVYSQLKFESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS ++ + P VD+ +I+I+ D RIDTYR+SGAGGQHVN TDSA+ Sbjct: 187 QRVPETESQGRVHTSACTVAILPEVDEIDDIQINPDDLRIDTYRSSGAGGQHVNKTDSAI 246 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTGVVV+CQ ERSQHKN+++A ++L+ +L + E K+ + ++ K+ +G G Sbjct: 247 RITHIPTGVVVECQDERSQHKNRSKAMSLLKTRLLDAEQSKQRKEQ--AQTRKSLVGTGD 304 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P + D R N+ +DV++G L ++ Sbjct: 305 RSERIRTYNY-PQGRLTDHRINLTIYQLNDVMEGKLSLVVEPL 346 >gi|153207868|ref|ZP_01946445.1| peptide chain release factor 2 [Coxiella burnetii 'MSU Goat Q177'] gi|165918820|ref|ZP_02218906.1| peptide chain release factor 2 [Coxiella burnetii RSA 334] gi|212219147|ref|YP_002305934.1| peptide chain release factor 2 [Coxiella burnetii CbuK_Q154] gi|120576294|gb|EAX32918.1| peptide chain release factor 2 [Coxiella burnetii 'MSU Goat Q177'] gi|165917452|gb|EDR36056.1| peptide chain release factor 2 [Coxiella burnetii RSA 334] gi|212013409|gb|ACJ20789.1| bacterial peptide chain release factor 2 [Coxiella burnetii CbuK_Q154] Length = 289 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 159/282 (56%), Positives = 212/282 (75%), Gaps = 1/282 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 + +L+ +E + ++ + + + ++++ + +F+ + SGE DSN+AYL++ AG+GGTE+Q Sbjct: 1 MAQLSKQEKETDLITDLNKDFKQLEKTIAEMEFQRMFSGEMDSNNAYLDIQAGSGGTEAQ 60 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA MLLRMY RW +K F T +E GE AGIKSAT+ G AYGWL+ E GVHRLV Sbjct: 61 DWAEMLLRMYLRWGDKHGFTTTLMEASPGEVAGIKSATIEFTGSYAYGWLRSETGVHRLV 120 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS +RRHTSF+S++V P +DD IEIEI+ ++ RIDTYRASGAGGQHVN TDSAVR Sbjct: 121 RKSPFDSGNRRHTSFASVFVSPEIDDDIEIEINPAELRIDTYRASGAGGQHVNRTDSAVR 180 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+P+G+VVQCQ +RSQHKNKAQA LRAKLYE+E+ K++E + E+SK+EI WG Q Sbjct: 181 ITHLPSGIVVQCQNDRSQHKNKAQAMKQLRAKLYEMEMMKQQEKQALLEASKSEISWGNQ 240 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 IRSYVL VKDLRT +E ++ VLDGD+D F++A L Sbjct: 241 IRSYVLD-ASRVKDLRTGVETSNTQAVLDGDIDLFIEACLKQ 281 >gi|319761653|ref|YP_004125590.1| peptide chain release factor 1 [Alicycliphilus denitrificans BC] gi|317116214|gb|ADU98702.1| peptide chain release factor 1 [Alicycliphilus denitrificans BC] Length = 360 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 116/343 (33%), Positives = 180/343 (52%), Gaps = 7/343 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + QRLS L+ + ++ + + + RE + + R D E+ Sbjct: 9 LERYAQRLSELDFLLSREDIMADMQQYRAISREHADVTAVAGRYARYRQREADLEGAREM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + QE + ++E + Q L D +A++E+ AG GG ES +A Sbjct: 69 LEDPDMAEMAQEEIAAAEAELAQLEDELQRMLLPKDPDDERNAFVEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMYTR+A + +K E + ++ E G K L I+G +AYG L+ E G HR+ R+ Sbjct: 129 GDLARMYTRYAATQGWKVEVMSANESELGGYKEVVLRIEGDHAYGRLRFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D++ I ++ +D RIDT+RASGAGGQH+N TDSAVR+ H Sbjct: 189 ATETQGRIHTSACTVAVMPEPDEAQAITLNPADLRIDTFRASGAGGQHINKTDSAVRVVH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+V +CQ RSQH NKA+A +L+A++ E E +R A K IG G + Sbjct: 249 LPTGIVAECQDGRSQHANKAKALQVLQARIQEKERSER--AAKEAALRKGLIGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P + D R N+ V++GDL + ++A + Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYKLLAVMEGDLGEVLQALQHAR 348 >gi|218289204|ref|ZP_03493439.1| peptide chain release factor 1 [Alicyclobacillus acidocaldarius LAA1] gi|218240552|gb|EED07732.1| peptide chain release factor 1 [Alicyclobacillus acidocaldarius LAA1] Length = 356 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 110/351 (31%), Positives = 180/351 (51%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + +R L+ P + + + + +E+ L + +E + + Sbjct: 1 MFDRLASMEERYEHLSQLLCRPDVASDPEKLRSYAKEQAELAETVEVYREWKKVSQNIDE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 + ++ D + + L ++ E + L D D ++E+ A AGG Sbjct: 61 AKAMLQDKLDDEMREFVKAELAELQPRREGLEHRLKILLLPKDPNDDKDVFVEIRAAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A LLRMY R+AEK +KTE ++ + G + + + G AY LK E G Sbjct: 121 EEAALFAAELLRMYQRYAEKHGWKTEIIDASYTDMGGFREVVMAVHGKGAYAKLKFESGT 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ + +E+EI E D RIDT+ ++G GGQ VNTT Sbjct: 181 HRVQRVPITESGGRIHTSTATVA-VLPEVEEVEVEIHEKDLRIDTFCSTGPGGQSVNTTQ 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VV CQ E+SQ KNK +A +LRA+LYE ++++E + + ++G Sbjct: 240 SAVRITHLPTGIVVSCQDEKSQLKNKEKAMRVLRARLYEKAQREQQEE--LAAKRRLQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + VLDG+LD+ ++A + + Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTLHKLDAVLDGELDEIIQALIVESQ 347 >gi|81428746|ref|YP_395746.1| peptide chain release factor 1 [Lactobacillus sakei subsp. sakei 23K] gi|119361554|sp|Q38WJ4|RF1_LACSS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|78610388|emb|CAI55438.1| Peptide chain release factor 1 [Lactobacillus sakei subsp. sakei 23K] Length = 365 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 108/352 (30%), Positives = 178/352 (50%), Gaps = 12/352 (3%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD-- 68 +F+ D + R + L DP + L +E L + +++ L + Sbjct: 3 KMFEQLDGLLDRYAELQELMSDPEVINETSRYMELSKEEAGLREIVGKYTRLKEVLSEVT 62 Query: 69 -NLILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAG 126 N LL + + +++ + LQ K + + + L + D + +E+ AG Sbjct: 63 ENEELLRETTDSEMTELVKADLEELQTEKAQLEQEIKILMLPTDPNDEKNIIMEIRGAAG 122 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A LL MY R+AE + ++TE ++ E G K ++I G N Y LK E G Sbjct: 123 GDEASLFAGDLLNMYQRYAESQNWQTEIIDETATEVGGFKEVAMMITGKNVYSKLKYENG 182 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ RI +S R HTS +++ V P D +++E+ D R+D YRASGAGGQH+N T Sbjct: 183 AHRVQRIPKTESQGRVHTSTATVAVMP-EYDGVDVELEAKDIRVDVYRASGAGGQHINKT 241 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+THIPTG+VV Q +RSQ +N+ +A +L+A++Y+ + + S K+ + Sbjct: 242 SSAVRMTHIPTGIVVAMQDQRSQQQNRVKAMKILQARVYDYYESQNQSE--YDSSRKSAV 299 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R + +++G+L D + A + + Sbjct: 300 GSGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELGDVIDALILFDQ 350 >gi|262401638|ref|ZP_06078204.1| peptide chain release factor 2 [Vibrio sp. RC586] gi|262352055|gb|EEZ01185.1| peptide chain release factor 2 [Vibrio sp. RC586] Length = 289 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 165/287 (57%), Positives = 213/287 (74%), Gaps = 1/287 (0%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 + D LLELA+E +D E L+ ++ ++E +F + SG+ D++D YL++ AG+ Sbjct: 1 MEDVDGLLELAIEAEDQETFDEIGPELEELEAKLEQLEFRRMFSGDHDASDCYLDLQAGS 60 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G AYGWL+ E Sbjct: 61 GGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWLRTET 120 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVR SP+DS RRHTSF+S ++YP VD++I+IEI+ +D RID YRASGAGGQHVNT Sbjct: 121 GVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQHVNT 180 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T+SAVRITH+PT VVQCQ +RSQHKNK QA LRAKL+ELELQK+ E SK++ Sbjct: 181 TESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDSKSD 240 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IGWG QIRSYVL +KDLRT IE + VLDGDLD F++A+L Sbjct: 241 IGWGSQIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDKFIEASLK 286 >gi|166710803|ref|ZP_02242010.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 361 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 109/345 (31%), Positives = 171/345 (49%), Gaps = 8/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R L DP + N + + L RE L+ +++ D + Sbjct: 9 LEALAERREELQHLLSDPDVVNNNDKFRTLSRELSQLEPVAVALEDEARAKADLSAAEAM 68 Query: 76 ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E Q + + D + +LEV AG GG E+ +A Sbjct: 69 RTDPEMRELAEEEIAAAQARLEELDTQLASLLVPRDPRDDGNLFLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+AE++ +K E GE G K + G AY LK E G HR+ R+ Sbjct: 129 GDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ + DD EI I+ +D ++DT+R+SGAGGQHVN T+SA+RITH Sbjct: 189 ATESQGRIHTSAATVAIIAEADDVEEIVINPADLKVDTFRSSGAGGQHVNKTESAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311 +P+GVVV+CQ ERSQH N+ +A L+A+L + E K A ++ K ++G G + Sbjct: 249 VPSGVVVECQTERSQHANRDKAMKRLKAQLLDTERSK--AAAAQAQTRKLQVGSGDRSQR 306 Query: 312 IRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R + ++++GDLD + L + Sbjct: 307 IRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIARLLHEHQ 350 >gi|15616337|ref|NP_244642.1| peptide chain release factor 1 [Bacillus halodurans C-125] gi|20139353|sp|Q9K6F4|RF1_BACHD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|10176399|dbj|BAB07494.1| peptide chain release factor 1 in translation [Bacillus halodurans C-125] Length = 356 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 112/351 (31%), Positives = 187/351 (53%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68 +F+ + +R LN DP + + + + +E+ ++ + +E + D+ D Sbjct: 1 MFERLQSLDERYERLNELLSDPEVISDSNKLREYSKEQADMEETVQVYREYKTVMDQYQD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGG 127 +LE L+++ ++++E D L K + + L D + +EV AGG Sbjct: 61 AKEMLEDKLDDEMYAMVKEEIDELATRKEDLEAKLKVLLLPKDPNDDKNVIVEVRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+Q +A L +MY R+AE + +K E +E E G K + G AY LK E G Sbjct: 121 DEAQLFAADLYKMYARYAEAQGWKIEVIEASSTELGGYKEIIFSVNGKGAYSKLKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +E++I E D R+DT+ +SG GGQ VNTT Sbjct: 181 HRVQRVPQTESGGRIHTSTATVAVLP-EAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+VV CQ E+SQ KNK +A +LRA++Y+ ++E A ++ K+ +G Sbjct: 240 SAVRLTHLPTGIVVSCQDEKSQIKNKEKAMKVLRARIYDKF--QQEAQAEYDQTRKSAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L G LD+ +++ + ++ Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTLQKLEQILQGKLDEIIESLIVHEQ 347 >gi|87309088|ref|ZP_01091225.1| peptide chain release factor 2 (RF-2) [Blastopirellula marina DSM 3645] gi|87288079|gb|EAQ79976.1| peptide chain release factor 2 (RF-2) [Blastopirellula marina DSM 3645] Length = 332 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 146/325 (44%), Positives = 211/325 (64%), Gaps = 2/325 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W N A+ ++ + + L + + ++ + D +LE+A E+D Sbjct: 1 MVAPDFWDNQEIAQTVVGQLKSLKSILEPLEACAAAVGDLDAMLEMAEEDDSFDAE--AK 58 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + R++ E++ + ++LL+G+ D+ A + +HA GGT++ DWA MLLRMY+ WA + Sbjct: 59 AEVARLEAELDQLELKALLNGQHDACGALVSIHARDGGTDANDWAEMLLRMYSHWAAEHD 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + E ++ D EEAGI SAT ++G AYG+LKGE G+HRLVRISP++S +R TSF+++ Sbjct: 119 YTVELIDRADNEEAGINSATFAVRGVMAYGYLKGESGMHRLVRISPFNSEGKRQTSFAAV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + DS E+EI E D RIDTYRASGAGGQHVN TDSA+R+TH+PTGVVVQCQ ERSQ Sbjct: 179 DVSPEIPDSEEVEIDEEDVRIDTYRASGAGGQHVNKTDSAIRLTHLPTGVVVQCQNERSQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 HKN+AQAW MLR+++ +E ++RE ++ ++G+G QIR+Y L P Q VKD RT Sbjct: 239 HKNRAQAWKMLRSRIARIEEERREAEEAARYKTQAKVGFGSQIRNYFLHPDQRVKDARTG 298 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 S V+DGD+ F+ A L + Sbjct: 299 HYVGSFHAVMDGDIQGFLDAYLRWR 323 >gi|294634840|ref|ZP_06713362.1| peptide chain release factor 2 [Edwardsiella tarda ATCC 23685] gi|291091713|gb|EFE24274.1| peptide chain release factor 2 [Edwardsiella tarda ATCC 23685] Length = 293 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 169/292 (57%), Positives = 213/292 (72%), Gaps = 1/292 (0%) Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L D LLELA+E DD E L ++++++ +F + SGE DS D YL++ Sbjct: 1 MHQGLEDVSGLLELAVEADDEETFDEAVAELDQLEVKLGQLEFRRMFSGEYDSADCYLDI 60 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E +GE AG+KSAT+ I G AYGWL Sbjct: 61 QAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESEGEVAGLKSATIKISGDYAYGWL 120 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQ Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQ 180 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E Sbjct: 181 HVNKTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEVQKKNAERQQMEE 240 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K++IGWG QIRSYVL +KDLRT++E + VLDGDLD F++A+L Sbjct: 241 NKSDIGWGSQIRSYVLDD-SRIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 291 >gi|69249626|ref|ZP_00605024.1| Peptide chain release factor 1 [Enterococcus faecium DO] gi|257880056|ref|ZP_05659709.1| peptide chain release factor 1 [Enterococcus faecium 1,230,933] gi|257882292|ref|ZP_05661945.1| peptide chain release factor 1 [Enterococcus faecium 1,231,502] gi|257885488|ref|ZP_05665141.1| peptide chain release factor 1 [Enterococcus faecium 1,231,501] gi|257891147|ref|ZP_05670800.1| peptide chain release factor 1 [Enterococcus faecium 1,231,410] gi|257893961|ref|ZP_05673614.1| peptide chain release factor 1 [Enterococcus faecium 1,231,408] gi|258614612|ref|ZP_05712382.1| peptide chain release factor 1 [Enterococcus faecium DO] gi|260560331|ref|ZP_05832507.1| peptide chain release factor 1 [Enterococcus faecium C68] gi|261208268|ref|ZP_05922941.1| peptide chain release factor 1 [Enterococcus faecium TC 6] gi|289565643|ref|ZP_06446089.1| peptide chain release factor 1 [Enterococcus faecium D344SRF] gi|293553327|ref|ZP_06673963.1| peptide chain release factor 1 [Enterococcus faecium E1039] gi|293563060|ref|ZP_06677526.1| peptide chain release factor 1 [Enterococcus faecium E1162] gi|293567649|ref|ZP_06678992.1| peptide chain release factor 1 [Enterococcus faecium E1071] gi|294615325|ref|ZP_06695200.1| peptide chain release factor 1 [Enterococcus faecium E1636] gi|294617194|ref|ZP_06696846.1| peptide chain release factor 1 [Enterococcus faecium E1679] gi|294623635|ref|ZP_06702473.1| peptide chain release factor 1 [Enterococcus faecium U0317] gi|314937739|ref|ZP_07845061.1| peptide chain release factor 1 [Enterococcus faecium TX0133a04] gi|314942363|ref|ZP_07849210.1| peptide chain release factor 1 [Enterococcus faecium TX0133C] gi|314947687|ref|ZP_07851096.1| peptide chain release factor 1 [Enterococcus faecium TX0082] gi|314952118|ref|ZP_07855137.1| peptide chain release factor 1 [Enterococcus faecium TX0133A] gi|314992371|ref|ZP_07857803.1| peptide chain release factor 1 [Enterococcus faecium TX0133B] gi|314997442|ref|ZP_07862389.1| peptide chain release factor 1 [Enterococcus faecium TX0133a01] gi|68194105|gb|EAN08645.1| Peptide chain release factor 1 [Enterococcus faecium DO] gi|257814284|gb|EEV43042.1| peptide chain release factor 1 [Enterococcus faecium 1,230,933] gi|257817950|gb|EEV45278.1| peptide chain release factor 1 [Enterococcus faecium 1,231,502] gi|257821344|gb|EEV48474.1| peptide chain release factor 1 [Enterococcus faecium 1,231,501] gi|257827507|gb|EEV54133.1| peptide chain release factor 1 [Enterococcus faecium 1,231,410] gi|257830340|gb|EEV56947.1| peptide chain release factor 1 [Enterococcus faecium 1,231,408] gi|260073676|gb|EEW62002.1| peptide chain release factor 1 [Enterococcus faecium C68] gi|260077525|gb|EEW65243.1| peptide chain release factor 1 [Enterococcus faecium TC 6] gi|289162611|gb|EFD10465.1| peptide chain release factor 1 [Enterococcus faecium D344SRF] gi|291589584|gb|EFF21389.1| peptide chain release factor 1 [Enterococcus faecium E1071] gi|291591828|gb|EFF23462.1| peptide chain release factor 1 [Enterococcus faecium E1636] gi|291596539|gb|EFF27780.1| peptide chain release factor 1 [Enterococcus faecium E1679] gi|291596961|gb|EFF28174.1| peptide chain release factor 1 [Enterococcus faecium U0317] gi|291602551|gb|EFF32767.1| peptide chain release factor 1 [Enterococcus faecium E1039] gi|291604974|gb|EFF34442.1| peptide chain release factor 1 [Enterococcus faecium E1162] gi|313588451|gb|EFR67296.1| peptide chain release factor 1 [Enterococcus faecium TX0133a01] gi|313593096|gb|EFR71941.1| peptide chain release factor 1 [Enterococcus faecium TX0133B] gi|313595737|gb|EFR74582.1| peptide chain release factor 1 [Enterococcus faecium TX0133A] gi|313598876|gb|EFR77721.1| peptide chain release factor 1 [Enterococcus faecium TX0133C] gi|313642877|gb|EFS07457.1| peptide chain release factor 1 [Enterococcus faecium TX0133a04] gi|313645928|gb|EFS10508.1| peptide chain release factor 1 [Enterococcus faecium TX0082] Length = 357 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 107/347 (30%), Positives = 171/347 (49%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---DNLIL 72 R L DP + + L +E + + + ++ + D L Sbjct: 5 LQAIEDRYEELGELLSDPEVISDTKRFMQLSKEEANTRETVEVYRRYKEVVQGITDTEEL 64 Query: 73 LELALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L L+++ +E S+ + ++ E + L D + +E+ AGG E+ Sbjct: 65 LGEKLDDEMAELAKEELSELKKEKEVLEEKIKILLLPKDPNDDKNIIMEIRGAAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MY ++AE + +KTE +E + G K ++I G N Y LK E G HR+ Sbjct: 125 LFAGDLFNMYQKYAEAQGWKTEVMEANVTGIGGYKEVIMMITGDNVYSKLKYESGAHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + +EI+I + D R D Y ASGAGGQHVN T SAVR Sbjct: 185 RVPSTESQGRIHTSTATVVVMP-EAEEVEIDIEDKDIRTDIYHASGAGGQHVNKTASAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q ERSQ KN+ +A +LRA++Y+ ++E + + K+ +G G Sbjct: 244 LTHLPTGIVVAMQDERSQIKNREKAMKILRARVYDKI--QQEAQSEYDANRKSAVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIVDALIMYDQ 347 >gi|304407781|ref|ZP_07389432.1| peptide chain release factor 1 [Paenibacillus curdlanolyticus YK9] gi|304343264|gb|EFM09107.1| peptide chain release factor 1 [Paenibacillus curdlanolyticus YK9] Length = 358 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 105/351 (29%), Positives = 184/351 (52%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68 + D R L+ DP + + + +E+ L A E + +L D Sbjct: 1 MLDRLSVLADRYEKLSELLCDPDVAGDPKRLREYSKEQSSLQEAYEAFTEYKQVCEQLDD 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127 ++L L+++ +++ L K ++ + + L D + +E+ AGG Sbjct: 61 AKLMLGEKLDDEMREMVKMEIGELDERKTALDERIRILLLPKDPNDDKNVIVEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY ++A+ + ++ E +++++ + G K +I G AY LK E G Sbjct: 121 DEAALFAYDLYRMYNKYADSQGWRVELMDMNESDLGGFKEVVFMIIGKGAYSKLKFESGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +S R HTS S++ V P + ++IEI + D RIDT+ +SGAGGQ VNTT Sbjct: 181 HRVQRIPATESGGRIHTSTSTVAVMP-EIEEVDIEIHDKDIRIDTFCSSGAGGQSVNTTK 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+ H+PTG++ CQ +SQ++NKA+A +LRA++Y E+ ++EE A K+++G Sbjct: 240 SAVRVLHVPTGIMATCQDGKSQNENKAKALQVLRARIY--EIHRQEEEAKYAGERKSKVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +++GD+++ ++ ++ Sbjct: 298 TGDRSERIRTYNY-PQSRVTDHRIGLTLHRLDAIMNGDIEEIVQTLTITEQ 347 >gi|56697312|ref|YP_167678.1| peptide chain release factor 1 [Ruegeria pomeroyi DSS-3] gi|81558450|sp|Q5LQM7|RF1_SILPO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|56679049|gb|AAV95715.1| peptide chain release factor 1 [Ruegeria pomeroyi DSS-3] Length = 351 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 119/341 (34%), Positives = 173/341 (50%), Gaps = 12/341 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D QR +L D ++ L +E L + I + D + Sbjct: 7 LDQITQRFQYLEAAMADGASGSDIA---ALAKEYSDLRPVVEQIAAWRQLCADMDEARAM 63 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D ++ +E L+ + Q L AD+ A LE+ G GG E+ +A Sbjct: 64 LSDPDMKALAEEELPLLKARLPEAEQALQLALLPKDAADARPAMLEIRPGTGGDEAALFA 123 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE R +K E +E+ + E GIK I G N + LK E GVHR+ R+ Sbjct: 124 GDLLRMYQRYAEARGWKLELIELQETELGGIKEVVARISGENVFARLKYESGVHRVQRVP 183 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P ++I+I D RIDT R+SGAGGQHVNTTDSAVRITH Sbjct: 184 ETESGGRIHTSAATVAVLP-EAQDVDIQIDPGDIRIDTMRSSGAGGQHVNTTDSAVRITH 242 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +P+G+VV E+SQH+N+ A +L+ +LY+LE Q+ + S ++G G + Sbjct: 243 LPSGIVVTSS-EKSQHRNREIAMQVLKTRLYDLERQRLDRER--SASRSAQVGTGDRSER 299 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IR+Y P + D R N+ V+ GDLD+ + A A Sbjct: 300 IRTYNF-PQGRMTDHRINLTLYKLDAVMQGDLDEVIDALAA 339 >gi|171462958|ref|YP_001797071.1| peptide chain release factor 1 [Polynucleobacter necessarius subsp. necessarius STIR1] gi|238692839|sp|B1XSY0|RF1_POLNS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|171192496|gb|ACB43457.1| peptide chain release factor 1 [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 359 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 109/344 (31%), Positives = 177/344 (51%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ RL+ LN+ +++ + L RE + + + D E+ Sbjct: 9 LDHLDTRLAELNSLLTSEEATKDMDAYRKLTREHSDIATVVEQFYLYKQAEADAQAAEEM 68 Query: 76 ALEEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + E ++ Q L E D + +LE+ AG GG E +A Sbjct: 69 RKDPEMKEFADEEQKQALATMEALESTLQKLLLPKDENDERNVFLEIRAGTGGDEGALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE++ +K E + + + G K L + G Y LK E G HR+ R+ Sbjct: 129 GDLLRMYTRFAERQGWKVEVVSAAESDLGGYKEVVLRLVGQAVYSRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ ++I+ ++ RIDT+RASGAGGQH+N TDSA+RITH Sbjct: 189 QTETQGRIHTSACTVAVMPETDELEAVKINPAELRIDTFRASGAGGQHINKTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG VV+CQ +RSQH+N+ QA +L +++ + ++RE+ ++ K+ +G G + Sbjct: 249 LPTGTVVECQDDRSQHRNREQAMKVLVSRIMDA--REREKHQLEAQTRKSLVGTGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++DGD+DD A + + Sbjct: 307 IRTYNF-PQGRITDHRINLTLYKIDAMMDGDIDDLCNALASEHQ 349 >gi|134296298|ref|YP_001120033.1| peptide chain release factor 2 [Burkholderia vietnamiensis G4] gi|134139455|gb|ABO55198.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia vietnamiensis G4] Length = 248 Score = 216 bits (551), Expect = 3e-54, Method: Composition-based stats. Identities = 148/247 (59%), Positives = 196/247 (79%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK Sbjct: 1 MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 +AT+ + G AYG+L+ E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+E++ + Sbjct: 61 NATIKVSGEYAYGFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 E++KR+ + ESSKT++GWG QIRSYVL VKDLRTN+E ++ VLDGDLDDF Sbjct: 181 AEMRKRQAEQDKLESSKTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTKAVLDGDLDDF 239 Query: 347 MKATLAI 353 + A+L Sbjct: 240 ISASLKQ 246 >gi|300716406|ref|YP_003741209.1| peptide chain release factor 1 (RF-1) [Erwinia billingiae Eb661] gi|299062242|emb|CAX59359.1| Peptide chain release factor 1 (RF-1) [Erwinia billingiae Eb661] Length = 360 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 112/337 (33%), Positives = 172/337 (51%), Gaps = 7/337 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + + Q D E+ Sbjct: 9 LEALQERHEEVEAMLGDAGVIADQDRFRALSREYAQLTDVSQCFRRWQQNQDDIAAAEEM 68 Query: 76 ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E D + + Q L D + YLEV AG GG E+ +A Sbjct: 69 LDDPEMRDMAQEELKDARATSEQLEQELQVLLLPKDPDDERNCYLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R++K E + +DGE G K + G AYG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAETRRWKIEIMSTNDGEHGGYKEVIAKVIGDGAYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P + ++ EI+ D +IDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAIMPELPEAEMPEINAGDLKIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A ++L A++ E + + + + +G G + Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIRAAETARLHQE--EASTRRNLLGTGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 R+Y P + D R N+ + + G LD ++ Sbjct: 307 NRTYNY-PQGRITDHRINLTLYRLDEAMQGKLDMLIE 342 >gi|46446286|ref|YP_007651.1| peptide chain release factor 1 [Candidatus Protochlamydia amoebophila UWE25] gi|61214629|sp|Q6MDH3|RF1_PARUW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|46399927|emb|CAF23376.1| probable translation releasing factor RF-1 [Candidatus Protochlamydia amoebophila UWE25] Length = 359 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 115/343 (33%), Positives = 197/343 (57%), Gaps = 10/343 (2%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLILLE 74 ++RL+ + +PH++ + + + L +E +L+N E ++ +L DN LL+ Sbjct: 8 ELLERLAEVEEVLGNPHVYDDQKKYRALTQEHAYLNNLKKSWDEKKDLEKQLEDNQELLK 67 Query: 75 LALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 + + + +L++ R++ + + D+ + +E+ AG GG E+ + Sbjct: 68 IEKDLEFAEVLKDDIRQLQSRVQELQLLIENLLVPPDPLDNRPSIIELRAGTGGDEAALF 127 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 +RMY +A+++ ++ E L E G K +++ G N Y +++ E G HR+ R+ Sbjct: 128 VGDCVRMYKLFADRKGWRYELLSCTPSEMGGFKEYVMVLSGENVYRFMQYEAGTHRVQRV 187 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 ++ R HTS +I V P D++ EI++ E D RIDTYR+SGAGGQHVNTTDSAVRIT Sbjct: 188 PATEAQGRVHTSAITIAVLPEPDENEEIDLDEKDLRIDTYRSSGAGGQHVNTTDSAVRIT 247 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H+P+G+VV CQ+ERSQHKNK +A +L+AK+ E+E QK+++ + + ++G G Sbjct: 248 HVPSGIVVYCQEERSQHKNKDKAMRLLKAKMAEIEQQKKQQE--LASTRAQQVGSGDRSE 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +IR+Y P + D R N+ K + V++GDL++ A +A Sbjct: 306 RIRTYNF-PQNRITDHRINLTKYNLDYVINGDLEEITSALVAY 347 >gi|307304754|ref|ZP_07584504.1| peptide chain release factor 1 [Shewanella baltica BA175] gi|306912156|gb|EFN42580.1| peptide chain release factor 1 [Shewanella baltica BA175] Length = 363 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 110/338 (32%), Positives = 178/338 (52%), Gaps = 9/338 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R + D + + + L +E L++ ++ K Q D E+ Sbjct: 9 LEGLLERNEEVMALLGDASVILDQDRFRALSKEYAQLEDVVAGFKAYQQAQVDLDSAKEM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D + Q L D +A++E+ AGAGG E+ Sbjct: 69 LEEDDAEMREMAQEEMKAAKAKLEHLEDELQILLLPKDPDDDKNAFVEIRAGAGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE +++ E + ++GE G K + + G YG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAEANRWQIEIMSCNEGEHGGFKEVIMKVSGDGVYGKLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V V ++ I I+ +D ++DT+R+SGAGGQHVN TDSA+RI Sbjct: 189 VPETESQGRVHTSAVTVVVLHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV+CQ +RSQHKN+AQA ++L A++ LE +KR + ++ + G Sbjct: 249 THIPTGIVVECQDQRSQHKNRAQAMSVLAARIQALEDEKRRSAEE--STRRSLVASGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 ++R+Y P V + R N+ ++V++GDLD + Sbjct: 307 ERVRTYNF-PQGRVSEHRINLTLYRLNEVMEGDLDAIL 343 >gi|308804958|ref|XP_003079791.1| putative translation releasing factor2 (ISS) [Ostreococcus tauri] gi|116058248|emb|CAL53437.1| putative translation releasing factor2 (ISS) [Ostreococcus tauri] Length = 419 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 122/344 (35%), Positives = 196/344 (56%), Gaps = 4/344 (1%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 D R L+ ++ LW++ +A+++M E + + + ++ + D LE Sbjct: 69 DVKGLKMRFESLDERSSAGDLWEDANKARVVMAELAGVREELDAARAFEEHVSDAKTALE 128 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGTES 130 LA + + + E ++ + LL G+ D+ A ++++AGAGG ++ Sbjct: 129 LAEVGESDNEMSEMLCEAMASVEALDEALEQWELRRLLGGKYDALGAVVQIYAGAGGLDA 188 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDW ML RMY W EKR + E +GE G+K+ATL + G +AYG+L E+G HRL Sbjct: 189 QDWTEMLERMYIGWCEKRGYGVRVTERQEGEGGGLKTATLEVDGRHAYGYLSSEKGTHRL 248 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 VR SP++ ++ R TSF+++ V P++ D E+++ E D I T R+SGAGGQ+VN ++AV Sbjct: 249 VRQSPFNKDAARQTSFAAVDVIPLLQDEDEVKVPEGDLEITTMRSSGAGGQNVNKLETAV 308 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RI H+PTG+ V+ ++ R+Q N+ A ++AKL L + R + WG+ Sbjct: 309 RIKHVPTGISVKAEEHRTQALNRQAAMLRIKAKLTALAEEARVADIAELRGDIVKAEWGQ 368 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 QIR+YVL PY+MVKD+RT +E + + VL+G LD++M L K Sbjct: 369 QIRNYVLHPYKMVKDVRTGVETSDVTRVLNGGLDEYMNGYLRWK 412 >gi|225175296|ref|ZP_03729291.1| peptide chain release factor 2 [Dethiobacter alkaliphilus AHT 1] gi|225169048|gb|EEG77847.1| peptide chain release factor 2 [Dethiobacter alkaliphilus AHT 1] Length = 288 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 154/258 (59%), Positives = 195/258 (75%), Gaps = 1/258 (0%) Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 E++ + L G D+N+A + +H GAGGTESQDWANMLLRMYTRWAE+R ++ E L+ Sbjct: 25 AEMDKLELAVLFRGRYDANNAIIAIHPGAGGTESQDWANMLLRMYTRWAERRNYQVEVLD 84 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 + G+EAGIKSATLLIKG NAYG+LK E+GVHRLVRISP+D+ SRRHTSF+S+ V P V+ Sbjct: 85 LLPGDEAGIKSATLLIKGRNAYGFLKAERGVHRLVRISPFDAASRRHTSFASLDVLPEVE 144 Query: 217 DSIE-IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 + IEIS D +IDTYRASGAGGQHVNTTDSAVRITHIPTG VVQCQ ERSQH N+ + Sbjct: 145 EGDSGIEISPDDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGTVVQCQNERSQHSNRDR 204 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A +L+A+L +L +++ E + + EI WG QIRSYV QPY MVKD RT +E + Sbjct: 205 AMKILKARLADLYQRQQAEELSNLRGEQKEIAWGSQIRSYVFQPYTMVKDHRTGVEVGNI 264 Query: 336 SDVLDGDLDDFMKATLAI 353 + V+DGDLD+ +++ L Sbjct: 265 NAVMDGDLDELIESYLRQ 282 >gi|103488191|ref|YP_617752.1| peptide chain release factor 1 [Sphingopyxis alaskensis RB2256] gi|119361612|sp|Q1GPK3|RF1_SPHAL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|98978268|gb|ABF54419.1| bacterial peptide chain release factor 1 (bRF-1) [Sphingopyxis alaskensis RB2256] Length = 355 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 115/344 (33%), Positives = 186/344 (54%), Gaps = 10/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R + L + + + +E L+ + +E+ + + L E+ Sbjct: 9 IDAIIERHAALQARMATGDMA--PADFVAASKEFAELEPVATAAREVVRLREELVALNEM 66 Query: 76 ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + ++ E ++ + L ADS A LE+ AG GG E+ +A Sbjct: 67 LADPEMKAMAVEEIAAVEAALPAAEHDLALQLLPKDVADSRAAMLEIRAGTGGDEAALFA 126 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY+R+A+ + +K E + ++ E G K + G + LK E GVHR+ R+ Sbjct: 127 GDLLRMYSRYADTQGWKVEIISANEAEVGGYKEVVASVSGQGVFAKLKFESGVHRVQRVP 186 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P + +++ I++SD +ID YRASGAGGQHVNTTDSA+RITH Sbjct: 187 VTESGGRIHTSAATVAVLP-EAEEVDVAINDSDLKIDIYRASGAGGQHVNTTDSAIRITH 245 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV Q +RSQHKN+A+A +LRA+LY+LE +K + + K+ +G G + Sbjct: 246 IPTGLVVIQQDQRSQHKNRAKAMQVLRARLYDLEREKL--HSAEASARKSMVGSGDRSER 303 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ ++L+G +D+ + A +A + Sbjct: 304 IRTYNF-PQGRVTDHRINLTLHRLPEILEGAMDELIDALIAEDQ 346 >gi|224026398|ref|ZP_03644764.1| hypothetical protein BACCOPRO_03154 [Bacteroides coprophilus DSM 18228] gi|224019634|gb|EEF77632.1| hypothetical protein BACCOPRO_03154 [Bacteroides coprophilus DSM 18228] Length = 369 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 94/353 (26%), Positives = 161/353 (45%), Gaps = 18/353 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V R ++T DP++ + L +E + L + ++ KE L + Sbjct: 11 LEGLVARFEEVSTLITDPNVIGDQKRYVKLTKEYKELGDIMAARKEYLQCLNGLEEAKMM 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYLEVHAGAGGTESQD 132 E D + + ++ + + D +A LE+ G GG E+ Sbjct: 71 MAENDPEMKEMAREEAAACEARIPQLEEEIKLLLVPADPQDDRNAILEIRGGTGGDEAAI 130 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++ E + +K E ++G G K + G YG LK E GVHR+ R Sbjct: 131 FAGDLFRMYSKYCESKGWKLEVSNANEGAAGGFKEIICSVTGDKVYGTLKYESGVHRVQR 190 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +S+ V P + I+E + + DT+R+ GAGGQ+VN +S VR+ Sbjct: 191 VPATETQGRVHTSAASVAVLPEAEPFDVE-INEGEIKWDTFRSGGAGGQNVNKVESGVRL 249 Query: 253 THIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 + ++++C + R Q KNK +A + LR +Y+ E QK I +I KT Sbjct: 250 RYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRKT 307 Query: 305 EIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + G + IR+Y P + D R N + + +DGD+ D + + + Sbjct: 308 MVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 359 >gi|270291033|ref|ZP_06197256.1| peptide chain release factor 1 [Pediococcus acidilactici 7_4] gi|304385309|ref|ZP_07367654.1| peptide chain release factor RF1 [Pediococcus acidilactici DSM 20284] gi|270280429|gb|EFA26264.1| peptide chain release factor 1 [Pediococcus acidilactici 7_4] gi|304328516|gb|EFL95737.1| peptide chain release factor RF1 [Pediococcus acidilactici DSM 20284] Length = 359 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 104/351 (29%), Positives = 171/351 (48%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D R L+ DP + + + L +E + + +E + + Sbjct: 3 IMDKVQAVADRYDELSELLADPEVLADSQRYQELSKEEGEIRETVEKYREYRKVVDSIAE 62 Query: 72 LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 EL E+ D + + + E + L D + +E+H AGG Sbjct: 63 NEELQREKLDPEMDSLVKAELADLRDQKEKLEEEIKVLMLPKDPNDDKNIIMEIHGAAGG 122 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L MYTR+AE + +K + ++ + + G K L+I G Y LK E G Sbjct: 123 DEASLFAADLYNMYTRYAESQGWKVQIVDENATDVGGFKEIVLMISGDKVYSKLKYENGA 182 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + ++IEI D R D YR+SGAGGQH+N T Sbjct: 183 HRVQRVPVTESAGRVHTSTATVGVMP-EAEDVDIEIDPKDIRTDVYRSSGAGGQHINKTS 241 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+VV Q ERSQ +N+ +A +L+A++Y+ + +E E K +G Sbjct: 242 SAVRMTHLPTGIVVAMQDERSQQQNREKAMRILKARVYDYY--QSQEEDAYNEERKNAVG 299 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + V++G+L++ ++A + + Sbjct: 300 TGDRSERIRTYNF-PQNRVTDHRIGLTLNKLDRVMNGELNEIIEALILDDQ 349 >gi|257439051|ref|ZP_05614806.1| peptide chain release factor 1 [Faecalibacterium prausnitzii A2-165] gi|257198541|gb|EEU96825.1| peptide chain release factor 1 [Faecalibacterium prausnitzii A2-165] Length = 356 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 104/347 (29%), Positives = 173/347 (49%), Gaps = 12/347 (3%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 + R L+ + P + + LM+E + + + + L Sbjct: 2 EAVSHRFEELSIRLNQPETAADPALFRRLMQEYHEAEPVVQAYQALTTAQDHLAQAKALL 61 Query: 77 LEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E +E K + + L D +E+ GAGG E+ Sbjct: 62 EGETLDPDFKEMVQQEIGEKSQEVAQLENNLKILLLPKDVNDDKSVIMELRGGAGGEEAA 121 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A+ L+RMYT + + R ++ E L +++ E G+K A L + G AY LK E GVHR+ Sbjct: 122 LFAHSLMRMYTMYVQSRGWELEVLNLNETELGGVKEAILAVNGAGAYNRLKYESGVHRVQ 181 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P + +++ I D RIDT+R+SGAGGQH+N T SA+R Sbjct: 182 RVPETETQGRIHTSTATVAVMPQ-AEEVDLVIDPKDLRIDTFRSSGAGGQHINKTSSAIR 240 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTG+VV+CQ ERSQ +NK +A +LR++L L +++E+ I + ++G G Sbjct: 241 VTHIPTGMVVECQNERSQFQNKDKALEVLRSRL--LAQKQKEQQDAINANRAGQVGTGDR 298 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P D R + + ++DG+LD+ + A ++ Sbjct: 299 SEKIRTYNF-PQDRCTDHRIGLTVHNLDKIMDGNLDEIIDALATHEQ 344 >gi|163789460|ref|ZP_02183899.1| peptide chain release factor 1 [Carnobacterium sp. AT7] gi|159875314|gb|EDP69379.1| peptide chain release factor 1 [Carnobacterium sp. AT7] Length = 358 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 107/351 (30%), Positives = 174/351 (49%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ R LN DP + + L +E + ++ + ++ D Sbjct: 1 MFDRLESVEGRYEELNELLSDPEVVSDTKRLMKLTKEEAAIRETVATYRRYKEVEQDISD 60 Query: 72 LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 ++ E+ D + + + + E + L E D + +E+ AGG Sbjct: 61 TEDMLGEKLDSEMAEMAKEELNDLKKEKTEIEEKMKVLMLPKDENDDRNIIMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+Q +A L MY ++A+ + +KTE L+ + G K TL+I G N Y LK E G Sbjct: 121 DEAQLFAGTLFNMYQKYADAQGWKTEVLDANITGIGGYKEITLMITGDNVYSKLKYENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +E+++ + D R D Y ASGAGGQHVN T Sbjct: 181 HRVQRVPSTESQGRIHTSTATVVVMP-EAEEVELDLPDKDIRTDIYHASGAGGQHVNKTA 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+ V Q ERSQ KN+ +A +LRA++Y+ ++ + K+ IG Sbjct: 240 SAVRLTHLPTGIAVAMQDERSQIKNREKAMKVLRARVYDHI--QQAAQSEYDAERKSAIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + +L G LD+ + A + ++ Sbjct: 298 TGDRSERIRTYNY-PQSRVTDHRIGLTIQKLDQILSGKLDEIIDALVLNEQ 347 >gi|303233066|ref|ZP_07319741.1| peptide chain release factor 2 [Atopobium vaginae PB189-T1-4] gi|302480841|gb|EFL43926.1| peptide chain release factor 2 [Atopobium vaginae PB189-T1-4] Length = 420 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 127/405 (31%), Positives = 198/405 (48%), Gaps = 52/405 (12%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLM------RE-------- 48 ++++L+ + D +++ L + W + A M ++ Sbjct: 12 VTQRLSDVERALQLDTMQTKIAELEAECAKEDFWGDPARASKTMATLTNLKQTQATMRDA 71 Query: 49 RQHLDNAISFIKEIQDRLCDN-------------------------------------LI 71 LD+ + + D + + Sbjct: 72 HALLDDLVVAYEFALDEMQNAALPVSGLDISHPHDAAASEATTSGEARSISHIPAASDAA 131 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 + +++E + + ++ + D DA + + G GG E+Q Sbjct: 132 SPADTAAQAQSDMMREAQHTYKTLTGLLDELELNRWFCDPYDQGDAIVTIKPGQGGLEAQ 191 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DW MLL+MY ++ E++ ++ + E GI AT + G AYG LK E GVHRLV Sbjct: 192 DWCAMLLKMYCKYCERKSWRVTINDCPQAEVIGIDRATFTVHGVRAYGMLKAEAGVHRLV 251 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RISP D+ RR T+F+ + V PV+ + ++EI+ D R+D + ASG GGQ VNTTDSAVR Sbjct: 252 RISPTDAKHRRQTTFAGVEVIPVLPEETDVEINPQDVRVDVFHASGPGGQGVNTTDSAVR 311 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +TH+P+G+VV CQ ERSQ +NKA A +L+A+LYEL+ Q+R N + T I WG Q Sbjct: 312 LTHMPSGIVVSCQNERSQLQNKAAAMEILKARLYELQRQQRATQLNDLKGLTTTISWGNQ 371 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y+L P+Q+VKD RT +E + VL +G+LD F+ A L K+ Sbjct: 372 IRNYILYPFQLVKDTRTQVETGNVDAVLQEGNLDPFIIAYLRWKQ 416 >gi|120612308|ref|YP_971986.1| peptide chain release factor 1 [Acidovorax citrulli AAC00-1] gi|166223521|sp|A1TTC4|RF1_ACIAC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|120590772|gb|ABM34212.1| bacterial peptide chain release factor 1 (bRF-1) [Acidovorax citrulli AAC00-1] Length = 360 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 112/343 (32%), Positives = 176/343 (51%), Gaps = 7/343 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + QRL L+ + ++ + + + RE + + R D E+ Sbjct: 9 LERYAQRLEELDFLLSREDIMSDMAQYRTISREHAEVTQVAGRYTRYRQREADLAGAREM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + +E + +++E + Q L ++ +A+LE+ AG GG ES +A Sbjct: 69 LDDPDMADMAREEIAAAEAELVQLEDELQRLLLPRDPDEARNAFLEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMYTR+A +K E L D E G K L ++G YG L+ E G HR+ R+ Sbjct: 129 GDLARMYTRYAATAGWKVEILSASDNEIGGYKEVVLRVEGDGVYGALRFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ I ++ +D RIDT+RASGAGGQH+N TDSAVR+ H Sbjct: 189 ATETQGRIHTSACTVAVMPEPDEQQAITLNPADLRIDTFRASGAGGQHINKTDSAVRVVH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+V +CQ RSQH NKA+A +L+A++ E E +R A K +G G + Sbjct: 249 LPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSER--AAKEAALRKGLVGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P + D R N+ +++GDL + ++A + Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYKLLAIMEGDLGEVLEALRHAR 348 >gi|114777343|ref|ZP_01452340.1| peptide chain release factor 1 [Mariprofundus ferrooxydans PV-1] gi|114552125|gb|EAU54627.1| peptide chain release factor 1 [Mariprofundus ferrooxydans PV-1] Length = 357 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 114/348 (32%), Positives = 168/348 (48%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 DN + R + DP + + L RE ++ + D LEL Sbjct: 5 LDNILHRREEIAVMLADPDVTSDNKRYTALSREFSEIEPVAEEAQHYLDLQQQLADNLEL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ-----FESLLSGEADSNDAYLEVHAGAGGTES 130 + D + L+E ++ R + L D+ D LE+ AG GG E+ Sbjct: 65 IADPDCDAELKEMAEAEAREIKQAISASDAALSMLLLPKDPNDNRDVILEIRAGTGGDEA 124 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY+R+AE + +K E L D G K I G + K E G HR+ Sbjct: 125 ALFAADLFRMYSRYAETQGYKVEILSASDTGIGGYKEIIAQISGNGVFSRFKFESGAHRV 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS ++ + P V + ++I I D RID YRASGAGGQHVN T+SAV Sbjct: 185 QRVPETESGGRIHTSACTVAILP-VAEEVDINIRPEDLRIDVYRASGAGGQHVNKTESAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIP+G+VV CQ + SQHKNKAQA +L+A+L++ E + + + K +G G Sbjct: 244 RITHIPSGLVVTCQDQASQHKNKAQAMKVLQARLFDKEQSELDAERSQA--RKGMVGSGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + +L GD+ + + A + + Sbjct: 302 RSERIRTYNY-PQGRITDHRIGLTLYKLEQILGGDMGELLDALITYHQ 348 >gi|326561123|gb|EGE11488.1| peptide chain release factor 2 [Moraxella catarrhalis 7169] Length = 248 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 154/247 (62%), Positives = 194/247 (78%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SGE D+N+ YL++ +G+GGTE+QDWA MLLRMY RW E FK E LE+ +G AGIK Sbjct: 1 MFSGEMDANNCYLDIQSGSGGTEAQDWAQMLLRMYLRWCESHGFKAEVLEVSEGGVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+++KG A+GWL+ E GVHRLVR SP+DSN+ RHTSF++++V P +DD+I+I+I+ + Sbjct: 61 SATIMVKGDYAFGWLRTEIGVHRLVRKSPFDSNNGRHTSFAAVFVSPEIDDNIDIDINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYR+SGAGGQHVNTTDSAVRITH PTGVVV CQ ERSQH NK A MLRAKLYE Sbjct: 121 DLRIDTYRSSGAGGQHVNTTDSAVRITHQPTGVVVACQNERSQHANKDTAMKMLRAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LE+QKR E E SK++IGWG QIRSYVL +KDLRT +E ++ + VL+GDLD F Sbjct: 181 LEMQKRMEKQQALEESKSDIGWGSQIRSYVLDD-SRIKDLRTGVETSNTTAVLNGDLDKF 239 Query: 347 MKATLAI 353 ++A+L Sbjct: 240 IEASLKA 246 >gi|290476399|ref|YP_003469304.1| peptide chain release factor RF-2 [Xenorhabdus bovienii SS-2004] gi|289175737|emb|CBJ82540.1| peptide chain release factor RF-2 [Xenorhabdus bovienii SS-2004] Length = 286 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 164/282 (58%), Positives = 209/282 (74%), Gaps = 1/282 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LLELA+E DD E L++++ ++ +F + SG+ DS + YL++ AG+GGTE+Q Sbjct: 4 LLELAVEADDEETFNEAVAELEQLEEKLGQLEFRRMFSGQYDSANCYLDLQAGSGGTEAQ 63 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+ML+RM+ RWAE + FKTE +E DG+ AG+KSAT+ I G AYGWL+ E GVHRLV Sbjct: 64 DWASMLMRMFLRWAESKGFKTEIIEESDGDVAGLKSATIKIIGEYAYGWLRTETGVHRLV 123 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS RRHTSFSS ++YP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 124 RKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 183 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPTG+V QCQ +RSQHKNK QA L+AKLYELE+QK+ E +K++IGWG Q Sbjct: 184 ITHIPTGLVTQCQNDRSQHKNKDQAMKQLKAKLYELEMQKKNADKQAMEENKSDIGWGSQ 243 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 IRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 244 IRSYVLDD-SRIKDLRTGVETRNTQSVLDGDLDKFIEASLKA 284 >gi|170702008|ref|ZP_02892928.1| peptide chain release factor 2 [Burkholderia ambifaria IOP40-10] gi|171322226|ref|ZP_02911072.1| peptide chain release factor 2 [Burkholderia ambifaria MEX-5] gi|172061072|ref|YP_001808724.1| peptide chain release factor 2 [Burkholderia ambifaria MC40-6] gi|170133098|gb|EDT01506.1| peptide chain release factor 2 [Burkholderia ambifaria IOP40-10] gi|171092451|gb|EDT37797.1| peptide chain release factor 2 [Burkholderia ambifaria MEX-5] gi|171993589|gb|ACB64508.1| peptide chain release factor 2 [Burkholderia ambifaria MC40-6] gi|325525095|gb|EGD02988.1| peptide chain release factor 2 [Burkholderia sp. TJI49] Length = 248 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 148/247 (59%), Positives = 196/247 (79%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK Sbjct: 1 MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 +AT+ + G AYG+L+ E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+E++ + Sbjct: 61 NATVKVTGEYAYGFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 E++KR+ + ESSKT++GWG QIRSYVL VKDLRTN+E ++ VLDGDLDDF Sbjct: 181 AEMRKRQAEQDKLESSKTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTRAVLDGDLDDF 239 Query: 347 MKATLAI 353 + A+L Sbjct: 240 ISASLKQ 246 >gi|251792904|ref|YP_003007630.1| peptide chain release factor 2 (RF-2) [Aggregatibacter aphrophilus NJ8700] gi|247534297|gb|ACS97543.1| peptide chain release factor 2 (RF-2) [Aggregatibacter aphrophilus NJ8700] Length = 289 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 162/288 (56%), Positives = 212/288 (73%), Gaps = 1/288 (0%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 + D LLELA+E +D + E L ++ ++ +F + SGE D+ D Y+++ AG+ Sbjct: 1 MEDVDGLLELAVEAEDEATFNEAVAELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGS 60 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G A+GWL+ E Sbjct: 61 GGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGVKSATIRVSGEYAFGWLRTET 120 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN Sbjct: 121 GIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNK 180 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T+SAVRITH+P+G+VVQCQ +RSQHKNK QA L+AKLYELELQK+ E +K++ Sbjct: 181 TESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSD 240 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 241 IGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 287 >gi|332877580|ref|ZP_08445324.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684429|gb|EGJ57282.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 315 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 138/308 (44%), Positives = 210/308 (68%), Gaps = 2/308 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MRE + + +E + D ++L+ + + + + +E +F Sbjct: 1 MRELRVKKKWVEDYEEAESLTSDVEVMLDFLKDGEASAEEVDQQYTQALHAIEAL--EFR 58 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++LS E D+ A L++ AGAGGTES DWA+MLLRMYT W +K+K + L +G+ AG+ Sbjct: 59 NMLSDEGDAMSAVLQITAGAGGTESCDWASMLLRMYTMWCNNQKYKVKTLNFQEGDVAGV 118 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ T+ I+G A+G+LKGE GVHRLVRISP+DSN++RHTSF+S++VYP+ DD+IEIEI+ Sbjct: 119 KTVTIEIEGEYAFGYLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDTIEIEINP 178 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D +T R+SGAGGQ+VN ++AVR+ H PTG++++ + RSQ NK +A +L+++LY Sbjct: 179 ADITFETMRSSGAGGQNVNKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQLLKSQLY 238 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+KR+ + E+ K +I WG QIR+YV+ PY++VKD+RT E T V++G+LDD Sbjct: 239 EIELKKRQAKRDEIEAGKMKIEWGSQIRNYVMHPYKLVKDVRTGYESTDVDSVMNGELDD 298 Query: 346 FMKATLAI 353 F+KA L + Sbjct: 299 FLKAYLML 306 >gi|241763794|ref|ZP_04761840.1| peptide chain release factor 1 [Acidovorax delafieldii 2AN] gi|241366926|gb|EER61331.1| peptide chain release factor 1 [Acidovorax delafieldii 2AN] Length = 362 Score = 216 bits (550), Expect = 4e-54, Method: Composition-based stats. Identities = 118/343 (34%), Positives = 180/343 (52%), Gaps = 7/343 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + QRL L+ + ++ + + + RE + Q R D E+ Sbjct: 9 LERYAQRLGELDFLLSREDIMADMAQYRTISREHAEVTQIAGRYARYQQREADLAGAREM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + QE + + L++E + Q L D+ +A++E+ AG GG ES +A Sbjct: 69 LADPDMAEMAQEEITSAEAELLQLEDELQRLLLPKDPDDARNAFVEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+A++ +K E + + E G K L I+G + YG LK E G HR+ R+ Sbjct: 129 GDLTRMYMRYADRVGWKVEVVSENAAELGGYKEIVLRIEGDHVYGALKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P D+ I+++ +D RIDT+RASGAGGQH+N TDSAVR+ H Sbjct: 189 ATETQGRIHTSACTVAVMPEPDEHEAIKLNPADLRIDTFRASGAGGQHINKTDSAVRVVH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+V +CQ RSQH NKA+A +L+A++ E E +R A K IG G + Sbjct: 249 LPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSER--AAKEAALRKGLIGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P + D R N+ V+DGDL D ++A + Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYKLQYVMDGDLADVLQALAHAR 348 >gi|254251975|ref|ZP_04945293.1| peptide chain release factor 2 [Burkholderia dolosa AUO158] gi|124894584|gb|EAY68464.1| peptide chain release factor 2 [Burkholderia dolosa AUO158] Length = 248 Score = 216 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 149/247 (60%), Positives = 196/247 (79%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK Sbjct: 1 MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 +AT+ + G AYG+L+ E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ + Sbjct: 61 NATIKVTGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 E++KR+ + ESSKT++GWG QIRSYVL VKDLRTN+E ++ VLDGDLDDF Sbjct: 181 AEMRKRQAEQDKLESSKTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTKAVLDGDLDDF 239 Query: 347 MKATLAI 353 + A+L Sbjct: 240 ISASLKQ 246 >gi|23015680|ref|ZP_00055449.1| COG0216: Protein chain release factor A [Magnetospirillum magnetotacticum MS-1] Length = 354 Score = 216 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 117/345 (33%), Positives = 185/345 (53%), Gaps = 10/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +D + R + + + + L +E LD ++ + + D + E+ Sbjct: 7 FDKVLYRHDEVRAQLSSGDGL-DSQTIQRLSKELSELDPVVTAVVAFRKAREDMVQAAEM 65 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + +E L+ Q L EAD +A +EV AG GG E+ +A Sbjct: 66 MNDPDMKDLAEEEFYALKERLPALEREVQIMLLPKDEADEKNAIIEVRAGTGGEEAALFA 125 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+A ++ E ++++D G+K A+ I G N + LK E GVHR+ R+ Sbjct: 126 AELFRMYERYASVHGWRFEVMDVNDTGIGGVKEASATITGRNVFARLKFESGVHRVQRVP 185 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ + P + ++I++++SD R D YR+ G+GGQ VNTTDSAVR+TH Sbjct: 186 ATESQGRIHTSAATVAIMP-EAEEVDIQLNDSDLRFDVYRSQGSGGQSVNTTDSAVRVTH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+ V CQQE+SQHKNKA A +LRA+LY E ++ + A + K+++G G + Sbjct: 245 IPTGLAVACQQEKSQHKNKATALKLLRARLY--ERERSAKDAERAAARKSQVGSGDRSER 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 IR+Y P V D R N+ V+ GD LD+ ++A +A + Sbjct: 303 IRTYNF-PQGRVTDHRINLTLYKIDAVMSGDALDELIEALVAADQ 346 >gi|89898158|ref|YP_515268.1| peptide chain release factor 1 [Chlamydophila felis Fe/C-56] gi|119361521|sp|Q255B5|RF1_CHLFF RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|89331530|dbj|BAE81123.1| peptide chain release factor RF-1 [Chlamydophila felis Fe/C-56] Length = 361 Score = 216 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 112/340 (32%), Positives = 174/340 (51%), Gaps = 11/340 (3%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLELAL 77 +RL + K DP ++ N E L RE L + ++ + L D+ L Sbjct: 10 KRLEEVEVKISDPEIFNNPKEYSSLSREHARLTELKNVYDKVLRHEKILNDDKHALAQEK 69 Query: 78 EEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 + + ++L+E + I+ + + + D + +E+ AG GG E+ + Sbjct: 70 DPEMIAMLEEGIQSGKSEIEKLYKILENLLVPPDPDDDLNVIMELRAGTGGDEAALFVGD 129 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 +RMY +A + +K E L + + G K + I G L+ E G HR+ R+ Sbjct: 130 CVRMYHLYASAKGWKYEELSASESDIGGYKEYVMGISGTGVKRLLQYEAGTHRVQRVPET 189 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEI-SESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 ++ R HTS ++ V P + E E D +IDT+RASGAGGQHVN TDSAVRITH+ Sbjct: 190 ETQGRVHTSAITVAVLPEPAEDDEEVFVDEKDLKIDTFRASGAGGQHVNVTDSAVRITHL 249 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTGVVV CQ ERSQHKNKA+A +L+A++ + E+Q+R + A+ S ++G G +I Sbjct: 250 PTGVVVTCQDERSQHKNKAKAMRILKARIRDAEMQRRHKEASAMRS--AQVGSGDRSERI 307 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 R+Y V D R + + V++GDLD A ++ Sbjct: 308 RTYNFS-QNRVTDHRIGLTLYNLDKVMEGDLDTITSALVS 346 >gi|257452270|ref|ZP_05617569.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_5R] gi|257465930|ref|ZP_05630241.1| peptide chain release factor 2 [Fusobacterium gonidiaformans ATCC 25563] gi|315917086|ref|ZP_07913326.1| peptide chain release factor 2 [Fusobacterium gonidiaformans ATCC 25563] gi|317058813|ref|ZP_07923298.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_5R] gi|313684489|gb|EFS21324.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_5R] gi|313690961|gb|EFS27796.1| peptide chain release factor 2 [Fusobacterium gonidiaformans ATCC 25563] Length = 326 Score = 216 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 155/324 (47%), Positives = 217/324 (66%), Gaps = 1/324 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 + W + + +++ ++ + + + + + +L+E D+ S ++ + Sbjct: 2 EEGFWNDKRSSSAVIKTMNEEKALLASFQSLVEEMEEEEVLIEFVEAGDEMSQIE-LEEK 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 +++ ++E LL GE D N+A + +H+GAGGTE+ DWA+ML RMYTRW +K+K Sbjct: 61 HKQLLKDMESFSTSLLLDGEYDGNNAIVTIHSGAGGTEACDWADMLYRMYTRWCNDKKYK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++ G+ GIKS T L+ G +AYG+LK E+G+HRLVRISP+D+N +RHTSF+S+ V Sbjct: 121 VEEMDFMPGDSVGIKSITFLVSGYHAYGYLKCEKGIHRLVRISPFDANKKRHTSFASVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P VD+S+E+EI SD RIDTYRASGAGGQHVN TDSAVRITH PTG+VV CQ+ERSQ Sbjct: 181 VPEVDESVEVEIEASDIRIDTYRASGAGGQHVNMTDSAVRITHFPTGIVVTCQKERSQLS 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ A ML++KL E+EL+K+EE + ++EIGWG QIRSYV QPY MVKD RT +E Sbjct: 241 NRETAMKMLKSKLLEIELKKKEEEMKKIQGEQSEIGWGSQIRSYVFQPYTMVKDHRTGVE 300 Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355 + V+DGDLDDFM L K Sbjct: 301 IGNIKAVMDGDLDDFMNGYLRWNK 324 >gi|313665080|ref|YP_004046951.1| peptide chain release factor 1 [Mycoplasma leachii PG50] gi|312949513|gb|ADR24109.1| peptide chain release factor 1 [Mycoplasma leachii PG50] Length = 363 Score = 216 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 118/347 (34%), Positives = 182/347 (52%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---LCDNLIL 72 + +RL + ED ++ +++ + L +E+ +L+ + E + + D + Sbjct: 9 LETMQKRLFQIQKDLEDENILKDIKKFTELNKEKANLEEVVEKFVEYKKAVDHIKDAKAI 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LE + + + + D ++ + L D + +E+ AGG E+ Sbjct: 69 LENEKDTELIELAKIELDENNDKVEHLQQVIEEMLLPKDPNDEKNVIVEIRGAAGGDEAN 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY +AE + +K LE GE G +IKG Y LK E G HR+ Sbjct: 129 IFAGDLLRMYKLYAETQNWKINILEASLGEAGGYSQVVFMIKGDRVYSKLKFESGAHRVQ 188 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R TS +++ V P +EIEI +D RIDTYRASGAGGQHVNTTDSAVR Sbjct: 189 RVPKTEAKGRIQTSTATVAVLP-EMSEVEIEIRSNDLRIDTYRASGAGGQHVNTTDSAVR 247 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV Q RSQH NK A MLRAK+YE E++K++ A+ + K +G G Sbjct: 248 ITHLPTGIVVTSQDGRSQHDNKDIAMTMLRAKVYEAEVEKQQAQAD--ATRKNAVGTGAR 305 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + V++G++D+F+ A + ++ Sbjct: 306 SEKIRTYNY-PQNRVTDHRIGLTLNKLDQVMEGNIDEFIIALINEEQ 351 >gi|171911189|ref|ZP_02926659.1| peptide chain release factor 1 [Verrucomicrobium spinosum DSM 4136] Length = 358 Score = 216 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 106/345 (30%), Positives = 174/345 (50%), Gaps = 10/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72 + R S L P+ + + +A L+RE + L+ + E + ++ DN L Sbjct: 7 IEKKKDRFSELEEMMGHPNFYDDNRKAGDLLREHRSLEALVKAWSEYQRTEQQIADNQEL 66 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + E +E R+ Q L + D +E+ AG GG E+ Sbjct: 67 AKSGDAELAALAEEELPTLQARLLELEGEVQRHILPPDPLEGRDVIMEIRAGTGGDEAAI 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY R+AE+R +K E++E + G K + G + + LK E GVHR+ R Sbjct: 127 FAGDLYRMYNRYAEERGWKIESMEASPSDAGGYKEVVFKVSGEDVFRTLKYESGVHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ V P + +++++ + RI+ RASG GGQ VNTTDSAV++ Sbjct: 187 VPATEAQGRIHTSAATVAVLP-EAEEVDLQLKPDELRIEVCRASGHGGQGVNTTDSAVQV 245 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 H+PTG++V+CQ RSQ KNK +A ++R++L LE +++EE A K IG G Sbjct: 246 MHLPTGMIVRCQDGRSQLKNKEKAITIMRSRL--LEKKQQEEAAKYSAHRKALIGGGGRE 303 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D R ++ + +DG + D + A + Sbjct: 304 EKIRTYNY-PQNRITDHRIDVTLYNLDMFVDGRIGDLVDKLQASE 347 >gi|320008549|gb|ADW03399.1| peptide chain release factor 1 [Streptomyces flavogriseus ATCC 33331] Length = 358 Score = 216 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 115/350 (32%), Positives = 174/350 (49%), Gaps = 16/350 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + + + L K DP + + A+ L + L +S + + D Sbjct: 1 MFEAVEELIGEHADLEKKLADPSVHADQANARKLNKRYAELTPIVSTYRSWKQTGDDIGT 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E DD E ++ + E + + +D D LE+ AGAGG ES Sbjct: 61 AREF--AADDPDFAAEVKVLEKQREEITEKLRLLLVPRDPSDDKDVLLEIKAGAGGDESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG----------PNAYGWL 181 +A LLRMY R+AE+ +KTE ++ + E G K + +K + + Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVAVKTKGGNGATEPGQGVWARM 178 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHR+ R+ +S R HTS + + V P + +++EI +D RID YR+SG GGQ Sbjct: 179 KYEGGVHRVQRVPSTESQGRIHTSAAGVLVTP-EAEEVDVEIHANDLRIDVYRSSGPGGQ 237 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PTGVV CQ E+SQ +NK QA +LR++L + E+ A+ Sbjct: 238 SVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEAAEQEASDVRR 297 Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 S+ + +IR+Y P + D R + + VLDGDLD ++A Sbjct: 298 SQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLDAVIQAC 346 >gi|260576769|ref|ZP_05844754.1| peptide chain release factor 1 [Rhodobacter sp. SW2] gi|259021021|gb|EEW24332.1| peptide chain release factor 1 [Rhodobacter sp. SW2] Length = 351 Score = 216 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 116/344 (33%), Positives = 177/344 (51%), Gaps = 12/344 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +R FL K E L RE L ++ I + L D L Sbjct: 7 LDQISRRFEFLEAKLAAGAGH---AEIASLSREYTDLKPVVAEISAYRRALDDLAQAEAL 63 Query: 76 ALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E RI + + L AD+ A LE+ G GG E+ +A Sbjct: 64 LADPEMRPLAEEELPSLKARIPELEQALRLALLPKDAADARPAILEIRPGTGGDEAALFA 123 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE + ++ E ++ D + GI+ T+ ++G + LK E GVHR+ R+ Sbjct: 124 ADLLRMYQRYAESQGWRFEIIDQQDSDLGGIRDVTVHVQGAGVFAKLKYESGVHRVQRVP 183 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P + ++++I SD RIDT RASGAGGQHVNTTDSAVRITH Sbjct: 184 ETESQGRVHTSAATVAVLP-EAEEVDLDIPASDIRIDTMRASGAGGQHVNTTDSAVRITH 242 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG++V ++SQH+N+ A +LRA+LY+LE + + K ++G G + Sbjct: 243 LPTGIIVTSA-QKSQHRNRDLAMQVLRARLYDLERARVD--GARAADRKAQVGSGDRSER 299 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ + ++ GDL + A +A + Sbjct: 300 IRTYNF-PQGRLTDHRINLTLYALPQIMAGDLGGVIDALVAQDQ 342 >gi|227552473|ref|ZP_03982522.1| peptide chain release factor RF1 [Enterococcus faecium TX1330] gi|257888289|ref|ZP_05667942.1| peptide chain release factor 1 [Enterococcus faecium 1,141,733] gi|257896821|ref|ZP_05676474.1| peptide chain release factor 1 [Enterococcus faecium Com12] gi|257899725|ref|ZP_05679378.1| peptide chain release factor 1 [Enterococcus faecium Com15] gi|293378550|ref|ZP_06624713.1| peptide chain release factor 1 [Enterococcus faecium PC4.1] gi|293571480|ref|ZP_06682507.1| peptide chain release factor 1 [Enterococcus faecium E980] gi|227178385|gb|EEI59357.1| peptide chain release factor RF1 [Enterococcus faecium TX1330] gi|257824343|gb|EEV51275.1| peptide chain release factor 1 [Enterococcus faecium 1,141,733] gi|257833386|gb|EEV59807.1| peptide chain release factor 1 [Enterococcus faecium Com12] gi|257837637|gb|EEV62711.1| peptide chain release factor 1 [Enterococcus faecium Com15] gi|291608485|gb|EFF37780.1| peptide chain release factor 1 [Enterococcus faecium E980] gi|292642879|gb|EFF61026.1| peptide chain release factor 1 [Enterococcus faecium PC4.1] Length = 357 Score = 216 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 107/347 (30%), Positives = 172/347 (49%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---DNLIL 72 + R L DP + + L +E + + + ++ + D L Sbjct: 5 LQSIEDRYEELGELLSDPEVISDTKRFMQLSKEEANTRETVEVYRRYKEVVQGITDTEEL 64 Query: 73 LELALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L L+++ +E S+ + ++ E + L D + +E+ AGG E+ Sbjct: 65 LGEKLDDEMAELAKEELSELKKEKEVLEEKIKILLLPKDPNDDKNIIMEIRGAAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MY ++AE + +KTE +E + G K ++I G N Y LK E G HR+ Sbjct: 125 LFAGDLFNMYQKYAEAQGWKTEVMEANVTGIGGYKEVIMMITGENVYSKLKYESGAHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + +EI+I + D R D Y ASGAGGQHVN T SAVR Sbjct: 185 RVPSTESQGRIHTSTATVVVMP-EAEEVEIDIEDKDIRTDIYHASGAGGQHVNKTASAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q ERSQ KN+ +A +LRA++Y+ ++E + + K+ +G G Sbjct: 244 LTHLPTGIVVAMQDERSQIKNREKAMKILRARVYDKI--QQEAQSEYDANRKSAVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIVDALIMYDQ 347 >gi|161524328|ref|YP_001579340.1| peptide chain release factor 2 [Burkholderia multivorans ATCC 17616] gi|189350916|ref|YP_001946544.1| peptide chain release factor 2 [Burkholderia multivorans ATCC 17616] gi|160341757|gb|ABX14843.1| peptide chain release factor 2 [Burkholderia multivorans ATCC 17616] gi|189334938|dbj|BAG44008.1| peptide chain release factor 2 [Burkholderia multivorans ATCC 17616] Length = 248 Score = 216 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 150/247 (60%), Positives = 196/247 (79%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK Sbjct: 1 MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 +AT+ + G AYG+L+ E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ + Sbjct: 61 NATIKVSGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 EL+KR+ + ESSKT++GWG QIRSYVL VKDLRTN+E ++ VLDGDLDDF Sbjct: 181 AELRKRQAEQDKLESSKTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTKAVLDGDLDDF 239 Query: 347 MKATLAI 353 + A+L Sbjct: 240 ISASLKQ 246 >gi|254247791|ref|ZP_04941112.1| Peptide chain release factor 2 [Burkholderia cenocepacia PC184] gi|124872567|gb|EAY64283.1| Peptide chain release factor 2 [Burkholderia cenocepacia PC184] Length = 248 Score = 216 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 149/247 (60%), Positives = 197/247 (79%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK Sbjct: 1 MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 +AT+ + G AYG+L+ E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ + Sbjct: 61 NATVKVTGEYAYGFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++LYE Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 +E++KR+ + ESSKT++GWG QIRSYVL VKDLRTN+E ++ VLDGDLDDF Sbjct: 181 VEMRKRQAEQDKLESSKTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTRAVLDGDLDDF 239 Query: 347 MKATLAI 353 + A+L Sbjct: 240 ISASLKQ 246 >gi|28199883|ref|NP_780197.1| peptide chain release factor 1 [Xylella fastidiosa Temecula1] gi|71899967|ref|ZP_00682113.1| Peptide chain release factor 1 [Xylella fastidiosa Ann-1] gi|182682635|ref|YP_001830795.1| peptide chain release factor 1 [Xylella fastidiosa M23] gi|32129935|sp|Q87A17|RF1_XYLFT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238691124|sp|B2IA85|RF1_XYLF2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|28058004|gb|AAO29846.1| peptide chain release factor 1 [Xylella fastidiosa Temecula1] gi|71730254|gb|EAO32339.1| Peptide chain release factor 1 [Xylella fastidiosa Ann-1] gi|182632745|gb|ACB93521.1| peptide chain release factor 1 [Xylella fastidiosa M23] gi|307578915|gb|ADN62884.1| peptide chain release factor 1 [Xylella fastidiosa subsp. fastidiosa GB514] Length = 361 Score = 216 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 110/340 (32%), Positives = 173/340 (50%), Gaps = 8/340 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R L DP + + + RE L + + E D L Sbjct: 9 LEALAERHEELERLLSDPKIASDTDRFRTYSRELAQLAPIATTLAEETRTKADLAAAETL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + ++ Q ++ + Q + D + +LEV AG GG E+ +A Sbjct: 69 RTDPEMRELAEQEIAIAQAHLTTLDEQLQRLLIPQDPRDECNLFLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMYTR+AE++++K E GE G K I G AY LK E G HR+ R+ Sbjct: 129 GNLFRMYTRYAERQRWKVEVESDTPGEHGGYKEIIARIVGRGAYSRLKFESGTHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ + P D+ +I I+ +D +IDT+R+SGAGGQHVN T+SA+RITH Sbjct: 189 ATESQGRIHTSAATVAIIPEADEIADISINPADLKIDTFRSSGAGGQHVNKTESAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311 +PTGVVV+ Q ERSQH N+ +A L+A+L +E Q+ ++ + K ++G G + Sbjct: 249 LPTGVVVESQTERSQHANRDKAMKRLKAQL--IESQRSQQATAEAMTRKLQVGSGDRSQR 306 Query: 312 IRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P + D R N+ ++++GDLD + Sbjct: 307 IRTYNF-PQGRITDHRVENLTLYDLPNIIEGDLDPLIDRL 345 >gi|71892127|ref|YP_277859.1| peptide chain release factor 1 [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|119361510|sp|Q492V8|RF1_BLOPB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|71796233|gb|AAZ40984.1| peptide chain release factor 1 (RF-1) [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 360 Score = 216 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 109/342 (31%), Positives = 176/342 (51%), Gaps = 7/342 (2%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 +R + L P+ + L +E L + + D + + +L Sbjct: 11 ALQERFNVLEKLLSKPNAIDDKKHFCTLAKEHARLSEIVVCFERWLDIKQEIINTKKLLE 70 Query: 78 EEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 + D I Q+ + +E + L + D ++E+ AG GG E+ + Sbjct: 71 DVDMHDIAQDELKTFYLNRNNIEKNLKILLLPTDSNDKLGCFIELRAGTGGKEAAIFTGE 130 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L RMY R++E R++K E + GE G K I AY LK E G HR+ RI Sbjct: 131 LFRMYVRYSEVRRWKMEIINATYGECGGYKEIIAKIPYRGAYSLLKFESGGHRVQRIPHT 190 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S R HTS +I V P + D I D RIDT+R+SGAGGQHVNTTDSA+RITH+P Sbjct: 191 ESQGRIHTSTCTIAVIPEIPDIELPSIDPHDLRIDTFRSSGAGGQHVNTTDSAIRITHVP 250 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 +G+VV+CQ ERSQHKNKA+A ++L ++L+ +E+++R++ + + + +G G +IR Sbjct: 251 SGLVVECQDERSQHKNKAKALSVLGSRLHAIEMKRRQQEVSC--TRRNLLGTGDRSDRIR 308 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +Y Q + D R + +++++G+LD ++ + + Sbjct: 309 TYNFQ-QGRITDHRISFTSYKLNEIMNGELDLLIQPIIHQHQ 349 >gi|293394608|ref|ZP_06638902.1| peptide chain release factor RF2 [Serratia odorifera DSM 4582] gi|291422917|gb|EFE96152.1| peptide chain release factor RF2 [Serratia odorifera DSM 4582] Length = 248 Score = 216 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 155/247 (62%), Positives = 192/247 (77%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SGE DS D YL++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E DG+ AG+K Sbjct: 1 MFSGEYDSADCYLDIQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEVIEESDGDVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ I G A+GWL+ E GVHRLVR SP+DS RRHTSFSS++VYP VD+ I+I+I+ + Sbjct: 61 SATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFVYPEVDEDIDIDINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+ LRAKLYE Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 E+QK+ E +K++IGWG QIRSYVL +KDLRTN+E + VLDGDLD F Sbjct: 181 YEMQKKNADKQALEDNKSDIGWGSQIRSYVLDD-SRIKDLRTNVETRNTQAVLDGDLDKF 239 Query: 347 MKATLAI 353 ++A+L Sbjct: 240 IEASLKA 246 >gi|288801053|ref|ZP_06406509.1| peptide chain release factor 2, programmed [Prevotella sp. oral taxon 299 str. F0039] gi|288331987|gb|EFC70469.1| peptide chain release factor 2, programmed [Prevotella sp. oral taxon 299 str. F0039] Length = 373 Score = 216 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 123/359 (34%), Positives = 204/359 (56%), Gaps = 12/359 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + + + L + + +T+ P W +V A+ M++ + ++ + KE+ Sbjct: 10 IQERADALHAYLNIEEKKVEFEEEQLRTQAPDFWDDVERAQEQMKKVKGIEKWLVGYKEV 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + + L D+ E + ++ VE + ++L + D D L+++ Sbjct: 70 RLLADELQ--LSFDFFHDEMVSESEVDETYKKALQAVEALELMNMLRQKEDPMDCVLKIN 127 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PNAYGWL 181 +GAGGTESQDWA+ML+R+Y RWAE K + +G+EAGIKS T+ I+G AYG+L Sbjct: 128 SGAGGTESQDWASMLMRLYMRWAESHGHKVTISNLQEGDEAGIKSVTMEIEGGEFAYGYL 187 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHRLVR+SP+++ +R TSF+S++V P+VDD+IE+ + S D +R+ GAGGQ Sbjct: 188 KSENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDTIEVYVDPSKVSWDLFRSGGAGGQ 247 Query: 242 HVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 +VN ++ VR+ + T ++++ + R Q +N+ A +L+++LY+ ++KR Sbjct: 248 NVNKVETGVRLRYQYTDPDTGVEEEILIENTESRKQLENRNNAMRLLKSQLYDRAMKKRL 307 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E E+ K +I WG QIRSYV + VKD RTN + T V++G +D+F+KA L Sbjct: 308 EAQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTTDVDGVMNGKIDEFIKAYLM 365 >gi|255004320|ref|ZP_05279121.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str. Virginia] Length = 255 Score = 216 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 153/249 (61%), Positives = 188/249 (75%), Gaps = 1/249 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA-EKRKFKTEALEIHDGEEAGI 165 + SGEAD + +L + GAGGTES DWA MLLRMY RWA F TE ++ DGE AG+ Sbjct: 1 MFSGEADGSGCFLVIRPGAGGTESNDWAAMLLRMYIRWAGTFHGFTTEIVDKIDGEAAGL 60 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KS T+ I G AYGW K E GVHRLVRISP+DS+SRRHTSF+S+ V P+ DD I+IEI E Sbjct: 61 KSVTVKISGNGAYGWAKTESGVHRLVRISPFDSSSRRHTSFASVEVSPIADDKIDIEILE 120 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D RIDTYRASGAGGQHVN T+SAVRITH+P+G+VVQCQ RSQH+N+A+A+++LR++LY Sbjct: 121 KDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVVQCQTSRSQHQNRAEAYSLLRSRLY 180 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+ELQ++E+ S+ +IGWG QIRSYV+ PY+MVKDLRT E VLDGDLD Sbjct: 181 EMELQEKEKKMAQEHDSRCDIGWGHQIRSYVMHPYRMVKDLRTGHETGDVDAVLDGDLDK 240 Query: 346 FMKATLAIK 354 F+ A L K Sbjct: 241 FIAAALTYK 249 >gi|218283971|ref|ZP_03489832.1| hypothetical protein EUBIFOR_02428 [Eubacterium biforme DSM 3989] gi|218215488|gb|EEC89026.1| hypothetical protein EUBIFOR_02428 [Eubacterium biforme DSM 3989] Length = 358 Score = 216 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 112/346 (32%), Positives = 176/346 (50%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R +N + + L RE+ L + +E + + + L Sbjct: 8 LEKMVERYREINDLMMQSDVVSDRKTMAKLGREQNELTPIVETYEEYKKAVEELEEAKVL 67 Query: 76 ALEED---DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + EED E + +I+ ++ + + DS++A LE+ AGG E Sbjct: 68 SKEEDKEIREMAQMELEELEPKIQNYLDRLELLLVPKDPNDSHNAILEIRGAAGGDEGNI 127 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AE + ++TE +E+ D E G + + G AYG LK E G HR+ R Sbjct: 128 FAGDLFRMYSKYAEAKGWRTEVIEMEDSEAGGFSLVSFKVNGEGAYGTLKFESGSHRVQR 187 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS +++ P ++ + +I +D I+T R+SGAGGQH+N TDSAVRI Sbjct: 188 VPKTESQGRIHTSTATVLCMP-EVEAEDFDIDMNDLEIETMRSSGAGGQHINKTDSAVRI 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 H PTG+VV+CQ RSQH+N+A A +RA++Y E ++RE + +T+IG G Sbjct: 247 VHKPTGIVVKCQDGRSQHENRATALMTIRARVY--EERQRELDQKNEKERRTKIGTGDRA 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R ++DG LDD M A + Sbjct: 305 EKIRTYNY-PQNRVTDHRIGYTVNQLDRIMDGRLDDLMAALQLADQ 349 >gi|114766145|ref|ZP_01445149.1| peptide chain release factor 1 [Pelagibaca bermudensis HTCC2601] gi|114541605|gb|EAU44647.1| peptide chain release factor 1 [Roseovarius sp. HTCC2601] Length = 349 Score = 216 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 116/341 (34%), Positives = 174/341 (51%), Gaps = 14/341 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +R +L + + ++ L RE L + I + D + Sbjct: 7 LQQIRERFEYLEARMAEGS--GDIA---ALGREYAELRPVVDQIHDWTSLQADLAEAEAM 61 Query: 76 ALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E R+ + Q L AD+ A LE+ G GG E+ +A Sbjct: 62 LDDPEMKELAEEELPGLRARLPEAEKALQLALLPKDAADARPAMLEIRPGTGGEEAALFA 121 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+AE R ++ E +E E G++ + I+G N + LK E GVHR+ R+ Sbjct: 122 GDLARMYQRYAEARGWRWEVIEEQPTELGGLRELVVRIEGDNVFARLKYESGVHRVQRVP 181 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P ++++I+I+ +D RIDT RASGAGGQHVNTTDSAVRITH Sbjct: 182 ETESGGRIHTSAATVAVLP-EAEAVDIDIAAADIRIDTMRASGAGGQHVNTTDSAVRITH 240 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV E+SQH+N+ A N+LR +L++LE QK K ++G G + Sbjct: 241 IPTGIVVTSS-EKSQHRNREIAMNVLRTRLFDLERQK--AADARASDRKAQVGSGDRSER 297 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IR+Y P + D R + +L GDLD+ + A A Sbjct: 298 IRTYNF-PQGRMTDHRIGLTLYRLEQILAGDLDEIIDALTA 337 >gi|21241714|ref|NP_641296.1| peptide chain release factor 1 [Xanthomonas axonopodis pv. citri str. 306] gi|294626107|ref|ZP_06704714.1| peptide chain release factor 1 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666025|ref|ZP_06731287.1| peptide chain release factor 1 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|24418638|sp|Q8PNU5|RF1_XANAC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|21107082|gb|AAM35832.1| peptide chain release factor 1 [Xanthomonas axonopodis pv. citri str. 306] gi|292599556|gb|EFF43686.1| peptide chain release factor 1 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292604217|gb|EFF47606.1| peptide chain release factor 1 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 361 Score = 216 bits (549), Expect = 5e-54, Method: Composition-based stats. Identities = 112/345 (32%), Positives = 173/345 (50%), Gaps = 8/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +R L DP + N + L RE L+ ++E D L Sbjct: 9 LQALAERREELQHLLSDPDVVGNNDTFRTLSRELSQLEPVAVALEEEARAKADLATAEAL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQF-ESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E Q +++ + + D + +LEV AG GG E+ +A Sbjct: 69 RNDPEMRELAEEEIAAAQARLEQLDAQLASLLVPRDPRDDGNLFLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+AE++ +K E GE G K + G AY LK E G HR+ R+ Sbjct: 129 GDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ + P DD EI I+ +D ++DT+R+SGAGGQHVN T+SA+RITH Sbjct: 189 ATESQGRIHTSAATVAIIPEADDVEEITINPADLKVDTFRSSGAGGQHVNKTESAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311 +P+GVVV+CQ ERSQH N+ +A L+A+L + E K A ++ K ++G G + Sbjct: 249 VPSGVVVECQTERSQHANRDKAMKRLKAQLLDTERSK--AAAAEAQTRKLQVGSGDRSQR 306 Query: 312 IRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R + ++++GDLD + L + Sbjct: 307 IRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIGRLLHEHQ 350 >gi|306844842|ref|ZP_07477425.1| peptide chain release factor 1 [Brucella sp. BO1] gi|306274774|gb|EFM56555.1| peptide chain release factor 1 [Brucella sp. BO1] Length = 359 Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats. Identities = 116/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R S + ++ + P + L E L + + I+E+ D + L + Sbjct: 10 DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARKEASDLAAM 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + ++ + + + Q L AD +A LE+ AG GG E+ Sbjct: 66 RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A ++ ++ E + +G+ G K + G + LK E GVHR+ Sbjct: 126 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + I+IEI D RIDT RASGAGGQHVNTTDSAV Sbjct: 186 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG++V Q E+SQH+N+A+A +LRA+LY++E QK + ++ ++++G G Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V++GDLD+ + A ++ + Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQ 348 >gi|15839238|ref|NP_299926.1| peptide chain release factor 1 [Xylella fastidiosa 9a5c] gi|20139358|sp|Q9PA71|RF1_XYLFA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|9107880|gb|AAF85446.1|AE004071_14 peptide chain release factor 1 [Xylella fastidiosa 9a5c] Length = 361 Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats. Identities = 110/340 (32%), Positives = 174/340 (51%), Gaps = 8/340 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R L DP + + + RE L + + E D L Sbjct: 9 LEALVERHEELERLLSDPKIVSDTDRFRTYSRELAQLAPIATTLAEETRTKADLAAAETL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + ++ Q ++ + Q + D + +LEV AG GG E+ +A Sbjct: 69 RTDPEMRELAEQEIAIAQAHLTTLDEELQRLLIPQDPRDECNLFLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMYTR+AE++++K E GE G K I G AY LK E G HR+ R+ Sbjct: 129 GNLFRMYTRYAERQRWKVEVESDTPGEHGGYKEIIARIVGRGAYSRLKFESGTHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ + P D+ +I I+ +D +IDT+R+SGAGGQHVN T+SA+RITH Sbjct: 189 ATESQGRIHTSAATVAIIPEADEIADISINPADLKIDTFRSSGAGGQHVNKTESAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311 +PTGVVV+ Q ERSQH N+ +A L+A+L +E ++ ++ + K ++G G + Sbjct: 249 LPTGVVVESQTERSQHANRDKAMKRLKAQL--IESERSQQATAEAMTRKLQVGSGDRSQR 306 Query: 312 IRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P + D R N+ ++++GDLD + Sbjct: 307 IRTYNF-PQGRITDHRVENLTLYDLPNIIEGDLDPLIDRL 345 >gi|291568918|dbj|BAI91190.1| peptide chain release factor 2 [Arthrospira platensis NIES-39] Length = 316 Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats. Identities = 139/306 (45%), Positives = 202/306 (66%), Gaps = 1/306 (0%) Query: 50 QHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS 109 L + + ++ + L D + EL EDD S+ QE N+ + +++ + + LLS Sbjct: 2 SDLKSVLQQQQDWRKTLEDTGAIAELLELEDDESLRQEAESNVVHLGRDIDRWELQQLLS 61 Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169 G D + A L ++AGAGGT++QDWA MLLRMYTRW E + +K E+ +G+EAGIKSAT Sbjct: 62 GPYDRSGAVLTINAGAGGTDAQDWAEMLLRMYTRWGEAQGYKVHLAELSEGDEAGIKSAT 121 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDC 228 L ++GP AYG+LK E+G HRLVRISP+++N +R TSF+ + + P+ + +I ++I E D Sbjct: 122 LEMEGPYAYGYLKAEKGTHRLVRISPFNANGKRQTSFAGVEIMPILDEGAINLDIPEKDL 181 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 I T RA G GGQ+VN ++AVRI HIPTG+ V+C QERSQ +N+ +A +L+AKL + Sbjct: 182 EITTSRAGGKGGQNVNKVETAVRIVHIPTGIAVRCTQERSQLQNREKAMALLKAKLLVVA 241 Query: 289 LQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 ++R + E WG QIR+YV PYQMVKDLRT E T+ +DV++G+LD F++ Sbjct: 242 QEQRAQAIAEIRGDLVEAAWGNQIRNYVFHPYQMVKDLRTGEETTAINDVMNGELDGFIQ 301 Query: 349 ATLAIK 354 A L + Sbjct: 302 AYLRQE 307 >gi|258512739|ref|YP_003186173.1| peptide chain release factor 1 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479465|gb|ACV59784.1| peptide chain release factor 1 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 356 Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats. Identities = 110/351 (31%), Positives = 180/351 (51%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + +R L+ P + + + + +E+ L + +E + + Sbjct: 1 MFDRLASMEERYEHLSQLLCRPDVASDPEKLRSYAKEQAELAETVEVYREWKKVSQNIDE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 + ++ D + + L ++ E + L D D ++E+ A AGG Sbjct: 61 AKAMLQDKLDDEMREFVRAELAELQRRREGLEHRLKILLLPKDPNDDKDVFVEIRAAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A LLRMY R+AEK +KTE ++ + G + + + G AY LK E G Sbjct: 121 EEAALFAAELLRMYQRYAEKHGWKTEIIDASYTDMGGFREVVMAVHGKGAYAKLKFESGT 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ + +E+EI E D RIDT+ ++G GGQ VNTT Sbjct: 181 HRVQRVPVTESGGRIHTSTATVA-VLPEVEEVEVEIHEKDLRIDTFCSTGPGGQSVNTTQ 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+VV CQ E+SQ KNK +A +LRA+LYE ++++E + + ++G Sbjct: 240 SAVRITHLPTGIVVSCQDEKSQLKNKEKAMRVLRARLYEKAQREQQEE--LAAKRRLQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + VLDG+LD+ ++A + + Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTLHKLDAVLDGELDEIIQALIVESQ 347 >gi|116618873|ref|YP_819244.1| peptide chain release factor 1 [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|122270927|sp|Q03VA1|RF1_LEUMM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|116097720|gb|ABJ62871.1| bacterial peptide chain release factor 1 (bRF-1) [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 356 Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats. Identities = 95/344 (27%), Positives = 168/344 (48%), Gaps = 8/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + LN + DP + N L +E + + + + D EL Sbjct: 8 LQTVIDHYDELNEQLADPEVMNNGQHYMKLSKEAGEIRQTVEVYTRYKQVIQDIQDAEEL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E L+ K ++E + + L D + +E+ AGG ES +A Sbjct: 68 LGDAEMAPLAKEDLSALKPEKEQLEEQLKILMLPKDPNDDKNIIMEIRGAAGGDESSLFA 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LL MY R+AE++ + ++ E G K ++I G N Y LK E G HR+ R+ Sbjct: 128 ADLLDMYRRYAERQNWSMSIIDESTTEVGGYKEVAVMITGDNVYSKLKFESGAHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS +++ V P ++ I+ E++ESD + +R+ GAGGQ+VN +AVR+ H Sbjct: 188 ATETQGRVHTSTATVGVMPEFEE-IDFELNESDLEEEFFRSGGAGGQNVNKVSTAVRLIH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 PTG++V+ Q+ER+Q KN+ +A +L +++Y+ Q+ E K+ +G G + Sbjct: 247 KPTGIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNESE--YAAQRKSAVGTGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R + +++G+L + + A + + Sbjct: 305 IRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELGEVIDALVIADQ 347 >gi|94986447|ref|YP_594380.1| peptide chain release factor 1 [Lawsonia intracellularis PHE/MN1-00] gi|119361555|sp|Q1MSG7|RF1_LAWIP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|94730696|emb|CAJ54058.1| Protein chain release factor A [Lawsonia intracellularis PHE/MN1-00] Length = 359 Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats. Identities = 109/345 (31%), Positives = 178/345 (51%), Gaps = 11/345 (3%) Query: 13 LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL---CD 68 +F +N Q+ + P+++ + + + L + L ++ ++ + + Sbjct: 1 MFAKLENLEQKFIEIECSLAQPNIFNDQEQYRKLTKTHSDLKPIVTTFQQFKKLQQQLSE 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 N L+ + L+E + + L D + LE+ AG GG Sbjct: 61 NKELISDIDPDIQEMALEEIKKLELELTHLEYELKILLLPKDPLDEKNILLEIRAGTGGE 120 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMY R+AEK +K E + D + G K LI+G N Y LK E G H Sbjct: 121 EAALFAADLFRMYCRYAEKMHWKVEIMSQSDSDTGGFKEIIALIQGDNVYSRLKFESGTH 180 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS +++ V P + ++IEI + R D +R+SG GGQ VNTTDS Sbjct: 181 RVQRVPTTESQGRIHTSAATVAVLP-EAEDVDIEIRPEELRFDVFRSSGPGGQSVNTTDS 239 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+THIPTG+VV CQ E+SQHKNKA+A +L ++L L++++ ++ ++ + +G Sbjct: 240 AVRVTHIPTGIVVTCQDEKSQHKNKAKALKVLSSRL--LQIKQEQQEIEQADARRALVGS 297 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G +IR+Y P V D R N+ S V++G++ +F+ A Sbjct: 298 GDRSERIRTYNF-PQGRVTDHRINLTLYSLIKVMEGEIQEFIDAL 341 >gi|83942386|ref|ZP_00954847.1| peptide chain release factor 1 [Sulfitobacter sp. EE-36] gi|83846479|gb|EAP84355.1| peptide chain release factor 1 [Sulfitobacter sp. EE-36] Length = 351 Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats. Identities = 120/341 (35%), Positives = 174/341 (51%), Gaps = 12/341 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 QR FL + + L +E L + I + L D + Sbjct: 7 LAQITQRFQFLEASMSAG---SDGADFAKLAKEYADLRPVVEQIDAYRQLLQDMDDARAM 63 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E L+ + E Q L EAD A LE+ G GG E+ +A Sbjct: 64 LKDPEMAELAEEELPRLKAALPQAEADLQLALLPRDEADKKPAMLEIRPGTGGDEAALFA 123 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE R +K E +E E G+K IKG N + LK E GVHR+ R+ Sbjct: 124 ADLLRMYQRYAEARGWKVELIEQQFTELGGVKEVVAHIKGENVFARLKYESGVHRVQRVP 183 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P + ++I I +D RIDT R+SGAGGQHVNTTDSAVRITH Sbjct: 184 STESGGRIHTSAATVAVLP-EAEDVDIHIDANDLRIDTMRSSGAGGQHVNTTDSAVRITH 242 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV E+SQH+N+ A +L+A+LY++E Q+ + + + ++G G + Sbjct: 243 LPTGLVVTSS-EKSQHRNREIAMQVLKARLYDMERQRVDSERSASRA--AQVGSGDRSER 299 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IR+Y P + D R N+ V+ GDLD+ + A A Sbjct: 300 IRTYNF-PQGRLTDHRINLTLYRLEAVMQGDLDEIVDALTA 339 >gi|328542097|ref|YP_004302206.1| peptide chain release factor 1 [polymorphum gilvum SL003B-26A1] gi|326411847|gb|ADZ68910.1| Peptide chain release factor 1 [Polymorphum gilvum SL003B-26A1] Length = 357 Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats. Identities = 124/351 (35%), Positives = 183/351 (52%), Gaps = 20/351 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAK--MLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D + R + + + N A L RE L+ ++ ++ ++ + Sbjct: 7 LDTLLARFAEIEHRMS-----SNPDAATYVRLSREYSDLEPLVARVRALRRAEAELADAE 61 Query: 74 ELA-----LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 L + E R++ + + L AD+NDA LEV AG GG Sbjct: 62 ALLEDSVGDPDMAELAEAEREALAARVEALTQEVRIGLLPKDSADTNDAILEVRAGTGGD 121 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMY R+A+ + +K E L +GE G K + G N + LK E GVH Sbjct: 122 EAALFAGDLFRMYQRYADLKGWKVEILSASEGEMGGFKEVIASVSGENVFARLKFESGVH 181 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS +++ V P +D ++I++ +SD RIDTYRASGAGGQHVNTTDS Sbjct: 182 RVQRVPETESGGRIHTSAATVAVLPQAED-VDIDVHDSDLRIDTYRASGAGGQHVNTTDS 240 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PTG+VV Q ERSQHKNKA+A +LRAK+Y+ E +K + E+ + ++G Sbjct: 241 AVRITHLPTGIVVAVQDERSQHKNKAKAMQLLRAKIYDAEREK--AASERTEARRLQVGS 298 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 G +IR+Y P V D R + V+ G+ LD+ + A + Sbjct: 299 GDRSERIRTYNF-PQGRVTDHRIGLTLYKLDQVISGEALDEVIDALTMDHQ 348 >gi|269140268|ref|YP_003296969.1| protein chain release factor B [Edwardsiella tarda EIB202] gi|267985929|gb|ACY85758.1| protein chain release factor B [Edwardsiella tarda EIB202] Length = 289 Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats. Identities = 168/288 (58%), Positives = 210/288 (72%), Gaps = 1/288 (0%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 + D LLELA+E DD E L + +++ +F + SGE DS D YL++ AG+ Sbjct: 1 MEDVSGLLELAVEADDEETFNEAVAELDLLDVKLGQLEFRRMFSGEYDSADCYLDIQAGS 60 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDWA+MLLRMY RWAE + FKTE +E +GE AG+KSAT+ I G AYGWL+ E Sbjct: 61 GGTEAQDWASMLLRMYLRWAESKGFKTEIIEESEGEVAGLKSATIKISGDYAYGWLRTET 120 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVR SP+DS RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN Sbjct: 121 GVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNK 180 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++ Sbjct: 181 TESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAERQQMEDTKSD 240 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 IGWG QIRSYVL +KDLRT++E + VLDGDLD F++A+L Sbjct: 241 IGWGSQIRSYVLDD-SRIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 287 >gi|71275264|ref|ZP_00651551.1| Peptide chain release factor 1 [Xylella fastidiosa Dixon] gi|170731262|ref|YP_001776695.1| peptide chain release factor 1 [Xylella fastidiosa M12] gi|238687964|sp|B0U5Z3|RF1_XYLFM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|71164073|gb|EAO13788.1| Peptide chain release factor 1 [Xylella fastidiosa Dixon] gi|167966055|gb|ACA13065.1| peptide chain release factor 1 [Xylella fastidiosa M12] Length = 361 Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats. Identities = 109/340 (32%), Positives = 173/340 (50%), Gaps = 8/340 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R L DP + + + RE L + + E D L Sbjct: 9 LEALAERHEELERLLSDPKIASDTDRFRTYSRELAQLAPIATTLAEETRTKADLAAAETL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + ++ Q ++ + Q + D + +LEV AG GG E+ +A Sbjct: 69 RTDPEMRELAEQEIAIAQAHLTTLDEQLQRLLIPQDPRDECNLFLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMYTR+AE++++K E GE G K I G AY LK E G HR+ R+ Sbjct: 129 GNLFRMYTRYAERQRWKVEVESDTPGEHGGYKEIIARIVGRGAYSRLKFESGTHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ + P D+ +I I+ +D +IDT+R+SGAGGQHVN T+SA+RITH Sbjct: 189 ATESQGRIHTSAATVAIIPEADEIADISINPADLKIDTFRSSGAGGQHVNKTESAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311 +PTGVVV+ Q ERSQH N+ +A L+A+L +E ++ ++ + K ++G G + Sbjct: 249 LPTGVVVESQTERSQHANRDKAMKRLKAQL--IESERSQQATAEAMTRKLQVGSGDRSQR 306 Query: 312 IRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P + D R N+ ++++GDLD + Sbjct: 307 IRTYNF-PQGRITDHRVENLTLYDLPNIIEGDLDPLIDRL 345 >gi|313681233|ref|YP_004058971.1| bacterial peptide chain release factor 1 (brf-1) [Sulfuricurvum kujiense DSM 16994] gi|313154093|gb|ADR32771.1| bacterial peptide chain release factor 1 (bRF-1) [Sulfuricurvum kujiense DSM 16994] Length = 355 Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats. Identities = 107/338 (31%), Positives = 174/338 (51%), Gaps = 9/338 (2%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 + R + L P + ++ L +E+ + ++ E + L D LA + Sbjct: 10 INRYNELTELLSSPDIGNDIKRMTELSKEQSSIQAIVNKATEYKKLLEDIEENKSLAFDA 69 Query: 80 DDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 + + +E L+ + E + + + D + Y+E+ AG GG E+ + L Sbjct: 70 ELGELAKEELRTLEPMVEPLEEEIKKLLIPADPNDKRNIYIELRAGTGGDEAAIFVGDLF 129 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 Y R+A+ + +K E + + G K LIKG Y LK E G HR+ R+ +S Sbjct: 130 NAYVRYADVKGWKIELMSSSPSDAGGYKEIIALIKGEQVYSRLKYEAGTHRVQRVPATES 189 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R HTS ++ V P D +E+ I+E+D +ID R+SG+GGQ VNTTDSAVRITH+PTG Sbjct: 190 QGRVHTSAITVAVMP-EVDDVEVTINENDLKIDVMRSSGSGGQSVNTTDSAVRITHLPTG 248 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSY 315 +VV Q E+SQHKNK +A +L+A++YE++++ E K ++G G +IR+Y Sbjct: 249 IVVTNQDEKSQHKNKDKAMKILKARIYEMQME--EAKVKEMSERKEQVGTGDRSGRIRTY 306 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLA 352 P + D R N+ +++ G L DD ++ +A Sbjct: 307 NY-PQNRISDHRINLTLYRLDEIMQGGLMDDIIEPLIA 343 >gi|237738152|ref|ZP_04568633.1| peptide chain release factor 2 [Fusobacterium mortiferum ATCC 9817] gi|229420032|gb|EEO35079.1| peptide chain release factor 2 [Fusobacterium mortiferum ATCC 9817] Length = 308 Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats. Identities = 151/303 (49%), Positives = 206/303 (67%), Gaps = 1/303 (0%) Query: 53 DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112 ++ K + L + +L+E + + +E + + +VE+ LL GE Sbjct: 5 KELVAEFKNLVAELENEEVLIEFVEQGET-DFQEELEEKHIILGKDVEHFDTRLLLDGEY 63 Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 DSN+A + +H+GAGGTE+ DWA+ML RMY+RW +K+K ++ G+ GIKS T ++ Sbjct: 64 DSNNAIVTIHSGAGGTEACDWADMLYRMYSRWCSDKKYKISEMDFMPGDSVGIKSITFMV 123 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G NA+G+LK E+GVHRLVRISP+D+N +RHTSF+S+ V P VDDSIE+ I SD RIDT Sbjct: 124 EGMNAFGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDDSIEVNIDPSDIRIDT 183 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQHVN TDSAVRITH PTG+VV CQ+ERSQ N+ A +L++KL ELE++K+ Sbjct: 184 YRASGAGGQHVNMTDSAVRITHFPTGIVVTCQRERSQLSNRETAMKLLKSKLIELEMKKK 243 Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 EE + +++IGWG QIRSYV QPY +VKD RTN E + V+DGD+D F+ L Sbjct: 244 EEELKKLQGEQSDIGWGNQIRSYVFQPYTLVKDHRTNCESGNIKAVMDGDIDIFINGYLR 303 Query: 353 IKK 355 K Sbjct: 304 WNK 306 >gi|238855957|ref|ZP_04646243.1| peptide chain release factor 1 [Lactobacillus jensenii 269-3] gi|260664674|ref|ZP_05865526.1| peptide chain release factor 1 [Lactobacillus jensenii SJ-7A-US] gi|282934364|ref|ZP_06339631.1| peptide chain release factor 1 [Lactobacillus jensenii 208-1] gi|313471876|ref|ZP_07812368.1| peptide chain release factor 1 [Lactobacillus jensenii 1153] gi|238831430|gb|EEQ23781.1| peptide chain release factor 1 [Lactobacillus jensenii 269-3] gi|239529209|gb|EEQ68210.1| peptide chain release factor 1 [Lactobacillus jensenii 1153] gi|260561739|gb|EEX27711.1| peptide chain release factor 1 [Lactobacillus jensenii SJ-7A-US] gi|281301574|gb|EFA93851.1| peptide chain release factor 1 [Lactobacillus jensenii 208-1] Length = 362 Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats. Identities = 100/343 (29%), Positives = 171/343 (49%), Gaps = 11/343 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V R + DP + + + +E + + ++ Q+ E+ Sbjct: 8 LEGLVARYEEIQELMADPEVINDTKRYMEISKEEADMREVVQKYRKYQEDQKTISDNKEI 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D +++ + ++ EV + L D D +E+ AGG E+ Sbjct: 68 IESESDADLVEMAKEENSDLEKEVADLEEEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY ++AE + +K ++ E G K ++I G Y LK E G HR+ Sbjct: 128 LFAGDLLRMYEKYAETQGWKISVIDEETTEVGGYKHVAIMITGDKVYSKLKYENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ V P + ++I++ D R+D YR+SGAGGQH+N T SAVR Sbjct: 188 RIPVTESQGRVHTSTATVAVMP-EYEQVDIDLDPKDIRVDVYRSSGAGGQHINKTSSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q +RSQ +N+A+A +L++++Y+ + + A+ E K +G G Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQNQ--ASYDEKRKNAVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R + +++G+LD+ + A + Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIISALI 346 >gi|332381658|gb|AEE66505.1| peptide chain release factor 2 [Bordetella pertussis CS] Length = 293 Score = 215 bits (548), Expect = 6e-54, Method: Composition-based stats. Identities = 154/290 (53%), Positives = 215/290 (74%), Gaps = 1/290 (0%) Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D+ L+ELAL + D + L+ + R + ++E +F + + AD + ++++ A Sbjct: 3 SGLADSCELVELALADSDDATLEAIEHDADRFQEKLETLEFRRMFANPADPLNCFVDIQA 62 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 GAGGTE+QDWA+MLLR Y ++AE++ FK E LE +G+ AG+KSAT+ I+G A+G+L+ Sbjct: 63 GAGGTEAQDWASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFGYLRT 122 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS+ RHTSF+S++VYP VD+S E+E++ +D RIDTYRASGAGGQH+ Sbjct: 123 ETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRIDTYRASGAGGQHI 182 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N TDSAVRITH P+G+VVQCQ +RSQH+N+A+A ML++KLYELE++ R E SK Sbjct: 183 NKTDSAVRITHAPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMTEQQKLEDSK 242 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 T++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F++A+L Sbjct: 243 TDVGWGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQ 291 >gi|170718675|ref|YP_001783869.1| peptide chain release factor 2 [Haemophilus somnus 2336] gi|168826804|gb|ACA32175.1| peptide chain release factor 2 [Haemophilus somnus 2336] Length = 289 Score = 215 bits (548), Expect = 7e-54, Method: Composition-based stats. Identities = 157/288 (54%), Positives = 209/288 (72%), Gaps = 1/288 (0%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 + D LLEL++E +D + E + ++ ++ +F + SG+ D+ D Y+++ AG+ Sbjct: 1 MEDVDGLLELSVEAEDETTFNEAVAEAEELEKKLATLEFRRMFSGQHDNCDCYVDLQAGS 60 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDW MLLRMY RWAE + FKTE +E+ G+ AG+KSAT+ I G A+GWL+ E Sbjct: 61 GGTEAQDWTEMLLRMYLRWAESKGFKTELVEVSSGDVAGLKSATIRIAGEYAFGWLRTET 120 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G+HRLVR SP+DSN+RRHTSF++ +VYP +DD IEIEI+ +D RID YRASGAGGQHVN Sbjct: 121 GIHRLVRKSPFDSNNRRHTSFAAAFVYPEIDDDIEIEINPADLRIDVYRASGAGGQHVNK 180 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T+SAVRITHIP+G+VVQCQ RSQH+NK QA L+AKLYE+E+ K+ E SK++ Sbjct: 181 TESAVRITHIPSGIVVQCQNGRSQHQNKDQAMKQLKAKLYEMEMMKKNADKQAMEDSKSD 240 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 241 IGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 287 >gi|313888275|ref|ZP_07821946.1| peptide chain release factor 1 [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845678|gb|EFR33068.1| peptide chain release factor 1 [Peptoniphilus harei ACS-146-V-Sch2b] Length = 355 Score = 215 bits (548), Expect = 7e-54, Method: Composition-based stats. Identities = 110/343 (32%), Positives = 175/343 (51%), Gaps = 11/343 (3%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 +L L + + + E ++ ++ + ++ L EL E+ Sbjct: 9 EDKLIELEKDLSSVEVINDSKLYQQKAIEHAEIEPIVTKYRAYKETLNSLNENKELIKEK 68 Query: 80 DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 D + + +VE + + + DS + +E+ AGAGG E+ +A Sbjct: 69 LDDDFKDLVREEINEATKKVEELENELKILLIPKDKNDSKNVMVEIRAGAGGDEAALFAG 128 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 +L R Y R+AE+ F+ E + ++ G K +I G AY LK E GVHR+ R+ Sbjct: 129 VLYRQYVRYAERSGFRVETISSNEIGIGGYKEIVFMIIGNGAYSRLKYESGVHRVQRVPE 188 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS +++ V P + ++IEI + + D +RASG GGQ VNTTDSAVR+THI Sbjct: 189 TESGGRIHTSTATVAVLP-EAEDVDIEIDPTQIKFDVFRASGNGGQCVNTTDSAVRLTHI 247 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTG+V+ CQ E+SQ +NK +A +LR+KLY+L+LQ++ E ++IG G +I Sbjct: 248 PTGIVISCQDEKSQLRNKEKAMKLLRSKLYDLKLQEQSE--KESMERSSQIGTGDRSERI 305 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R+Y P V D R N+ + DGDLD+ + A + + Sbjct: 306 RTYNY-PQGRVTDHRINLTSHRIDAINDGDLDEIIDALITYDQ 347 >gi|256830555|ref|YP_003159283.1| peptide chain release factor 1 [Desulfomicrobium baculatum DSM 4028] gi|256579731|gb|ACU90867.1| peptide chain release factor 1 [Desulfomicrobium baculatum DSM 4028] Length = 353 Score = 215 bits (548), Expect = 7e-54, Method: Composition-based stats. Identities = 102/341 (29%), Positives = 171/341 (50%), Gaps = 10/341 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ + L + P ++Q+ + + ++ LD + + + L + EL Sbjct: 5 LESLAAKYRELEREMSTPEIFQDQERYRKIAKKHAELDEIVKAFELYKTLLREMAENQEL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS---NDAYLEVHAGAGGTESQD 132 A + D ++ + E ++ L D + LE+ AG GG E+ Sbjct: 65 AKDSDPELCEMAQAEIVLLKAAIGEQEKVLKQLLTPKDPLDEKNIILEIRAGTGGEEAAL 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 + + RMY+R+AE ++ E L D G K + G N Y LK E G HR+ R Sbjct: 125 FVADIFRMYSRYAELHSWRVEVLSSSDTGTGGFKEIIASVSGTNVYSKLKYESGAHRVQR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ + P + ++++I +D R+D +R+SG GGQ VNTTDSA+RI Sbjct: 185 VPATESQGRIHTSAITVAILP-EAEEVDVKIDPNDIRVDVFRSSGPGGQSVNTTDSAIRI 243 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+ TG+VV CQ E+SQHKNKA+A +LR++L L+ + E ++ K+++G G Sbjct: 244 THLATGLVVICQDEKSQHKNKAKALKVLRSRL--LQAAQDETKKAYDDNRKSQVGSGDRS 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R N+ + ++G +DD + Sbjct: 302 ERIRTYNY-PQGRVTDHRINLTLYNLDQAMEGHIDDIIDGL 341 >gi|227328400|ref|ZP_03832424.1| peptide chain release factor 2 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 248 Score = 215 bits (548), Expect = 7e-54, Method: Composition-based stats. Identities = 153/247 (61%), Positives = 187/247 (75%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ DS D YL++ AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E DG+ AG K Sbjct: 1 MFSGQYDSADCYLDIQAGSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ I G A+GWL+ E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ + Sbjct: 61 SATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE Sbjct: 121 DLRIDVYRASGAGGQHVNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 E+QK+ E +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F Sbjct: 181 FEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKF 239 Query: 347 MKATLAI 353 ++A+L Sbjct: 240 IEASLKA 246 >gi|91762141|ref|ZP_01264106.1| bacterial peptide chain release factor 2 (RF-2) [Candidatus Pelagibacter ubique HTCC1002] gi|91717943|gb|EAS84593.1| bacterial peptide chain release factor 2 (RF-2) [Candidatus Pelagibacter ubique HTCC1002] Length = 284 Score = 215 bits (548), Expect = 7e-54, Method: Composition-based stats. Identities = 169/280 (60%), Positives = 225/280 (80%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 + ELALEE + S++ E ++++ +K + + + LS E DS + Y+E+HAGAGGTESQ Sbjct: 1 MNELALEEKNQSVINEVLESIKNLKKLAKKNETKCFLSNETDSLNCYIEIHAGAGGTESQ 60 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA ML RMY +W++ + FK+E + H GEEAGIKS+T+ I+G +GWLK E G+HRLV Sbjct: 61 DWAEMLRRMYLKWSDIKNFKSELISEHKGEEAGIKSSTIKIEGDYVFGWLKAESGIHRLV 120 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RISP+DS +RRHTSF+SIW+YPV+D++IEIEI+E D RIDTYR+SGAGGQHVNTTDSAVR Sbjct: 121 RISPFDSGARRHTSFASIWIYPVIDENIEIEINEKDLRIDTYRSSGAGGQHVNTTDSAVR 180 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+P+ +VVQCQ ERSQHKNK NML+A+LY+ EL+K+E+ + ESSK+EIGWG Q Sbjct: 181 ITHLPSKIVVQCQNERSQHKNKDTCMNMLKARLYDFELKKKEQESQTVESSKSEIGWGHQ 240 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVL PY+MVKD RTN E ++P +LDG++DDF++++L Sbjct: 241 IRSYVLHPYRMVKDNRTNFESSNPDKILDGEIDDFLESSL 280 >gi|239944287|ref|ZP_04696224.1| peptide chain release factor 1 [Streptomyces roseosporus NRRL 15998] gi|239990742|ref|ZP_04711406.1| peptide chain release factor 1 [Streptomyces roseosporus NRRL 11379] gi|291447755|ref|ZP_06587145.1| peptide chain release factor 1 [Streptomyces roseosporus NRRL 15998] gi|291350702|gb|EFE77606.1| peptide chain release factor 1 [Streptomyces roseosporus NRRL 15998] Length = 358 Score = 215 bits (548), Expect = 7e-54, Method: Composition-based stats. Identities = 114/354 (32%), Positives = 176/354 (49%), Gaps = 16/354 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + + + L K DP + + A+ L + L +S + + D Sbjct: 1 MFEAVEELIGEHTDLEKKLADPSVHADQANARKLNKRYAELTPIVSTYRAWKQTGDDIET 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E DD E + ++ + E + + +D D LE+ AGAGG ES Sbjct: 61 AREF--AADDPDFAAEVKELEKQREEITEKLRLLLVPRDPSDDKDVLLEIKAGAGGDESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG----------PNAYGWL 181 +A LLRMY R+AE+ +KTE ++ + E G K + +K + + Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVAVKTKGGNGATEPGQGVWARM 178 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHR+ R+ +S R HTS + + V P + +++EI +D RID YR+SG GGQ Sbjct: 179 KYEGGVHRVQRVPSTESQGRIHTSAAGVLVTP-EAEEVDVEIHANDLRIDVYRSSGPGGQ 237 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PTGVV CQ E+SQ +NK QA +LR++L + E+ A+ Sbjct: 238 SVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEAAEQEASDVRR 297 Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 S+ + +IR+Y P + D R + + VLDG+LD ++A + Sbjct: 298 SQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGELDAVIQACVDAD 350 >gi|83953606|ref|ZP_00962327.1| peptide chain release factor 1 [Sulfitobacter sp. NAS-14.1] gi|83841551|gb|EAP80720.1| peptide chain release factor 1 [Sulfitobacter sp. NAS-14.1] Length = 351 Score = 215 bits (548), Expect = 7e-54, Method: Composition-based stats. Identities = 120/341 (35%), Positives = 174/341 (51%), Gaps = 12/341 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 QR FL + + L +E L + I + L D + Sbjct: 7 LAQITQRFQFLEASMSAG---SDGADFAKLAKEYADLRPVVEQIDAYRQLLQDMDDARAM 63 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E L+ + E Q L EAD A LE+ G GG E+ +A Sbjct: 64 LKDTEMAELAEEELPRLKAALPQAEADLQLALLPRDEADKKPAMLEIRPGTGGDEAALFA 123 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE R +K E +E E G+K IKG N + LK E GVHR+ R+ Sbjct: 124 ADLLRMYQRYAEARGWKFELIEQQFTELGGVKEVVAHIKGENVFARLKYESGVHRVQRVP 183 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P + ++I I +D RIDT R+SGAGGQHVNTTDSAVRITH Sbjct: 184 STESGGRIHTSAATVAVLP-EAEDVDIHIDANDLRIDTMRSSGAGGQHVNTTDSAVRITH 242 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV E+SQH+N+ A +L+A+LY++E Q+ + + + ++G G + Sbjct: 243 LPTGLVVTSS-EKSQHRNREIAMQVLKARLYDMERQRVDSERSASRA--AQVGSGDRSER 299 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IR+Y P + D R N+ V+ GDLD+ + A A Sbjct: 300 IRTYNF-PQGRLTDHRINLTLYRLEAVMQGDLDEIVDALTA 339 >gi|265996886|ref|ZP_06109443.1| peptide chain release factor 1 [Brucella ceti M490/95/1] gi|262551354|gb|EEZ07344.1| peptide chain release factor 1 [Brucella ceti M490/95/1] Length = 372 Score = 215 bits (548), Expect = 7e-54, Method: Composition-based stats. Identities = 116/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R S + ++ + P + L E L + + I+E+ D + L + Sbjct: 23 DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 78 Query: 76 ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + ++ + + + Q L AD +A LE+ AG GG E+ Sbjct: 79 RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 138 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A ++ ++ E + +G+ G K + G + LK E GVHR+ Sbjct: 139 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSTLKFESGVHRV 198 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + I+IEI D RIDT RASGAGGQHVNTTDSAV Sbjct: 199 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 257 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG++V Q E+SQH+N+A+A +LRA+LY++E QK + ++ ++++G G Sbjct: 258 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 314 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V++GDLD+ + A ++ + Sbjct: 315 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQ 361 >gi|154705875|ref|YP_001424983.1| peptide chain release factor 2 [Coxiella burnetii Dugway 5J108-111] gi|154355161|gb|ABS76623.1| bacterial peptide chain release factor 2 (RF-2) [Coxiella burnetii Dugway 5J108-111] Length = 289 Score = 215 bits (548), Expect = 7e-54, Method: Composition-based stats. Identities = 159/282 (56%), Positives = 211/282 (74%), Gaps = 1/282 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 + +L+ +E + ++ + + + ++++ + +F+ + SGE DSN+AYL++ AG+GGTE+Q Sbjct: 1 MAQLSKQEKETDLITDLNKDFKQLEKTIAEMEFQRMFSGEMDSNNAYLDIQAGSGGTEAQ 60 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA MLLRMY RW +K F T +E GE AGIKSAT+ G AYGWL+ E GVHRLV Sbjct: 61 DWAEMLLRMYLRWGDKHGFTTTLMEASPGEVAGIKSATIEFTGSYAYGWLRSETGVHRLV 120 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS +RRHTSF+S++V P +DD IEIEI+ ++ RIDTYRASGAGGQHVN TDSAVR Sbjct: 121 RKSPFDSGNRRHTSFASVFVSPEIDDDIEIEINPAELRIDTYRASGAGGQHVNRTDSAVR 180 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+P+G+VVQCQ +RSQHKNKAQA LRAKLYE+E+ K++E + E SK+EI WG Q Sbjct: 181 ITHLPSGIVVQCQNDRSQHKNKAQAMKQLRAKLYEMEMMKQQEKQALLEVSKSEISWGNQ 240 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 IRSYVL VKDLRT +E ++ VLDGD+D F++A L Sbjct: 241 IRSYVLD-ASRVKDLRTGVETSNTQAVLDGDIDLFIEACLKQ 281 >gi|126736399|ref|ZP_01752141.1| peptide chain release factor 1 [Roseobacter sp. CCS2] gi|126714220|gb|EBA11089.1| peptide chain release factor 1 [Roseobacter sp. CCS2] Length = 351 Score = 215 bits (548), Expect = 7e-54, Method: Composition-based stats. Identities = 114/341 (33%), Positives = 174/341 (51%), Gaps = 12/341 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + R FL K D E L +E L + + +D + + Sbjct: 7 IEQLIDRFQFLEAKMADGSAGN---EIAALGKEYADLRPVVETVTAYKDLVQQIDEAEAM 63 Query: 76 ALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + + +L+ Q L AD+ A LE+ G GG E+ +A Sbjct: 64 LADPEMKELAEAELPDLKAALAASEHDVQLALLPKDAADARPALLEIRPGTGGDEAGLFA 123 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE + ++ E LE E G+K I G + +K E GVHR+ R+ Sbjct: 124 ADLLRMYQRYAEGQGWRFEILEESLSELGGVKEVVARIVGDGVFAKMKYESGVHRVQRVP 183 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P + ++IEI+ +D RIDT RASG+GGQHVNTTDSAVRI H Sbjct: 184 ETESGGRIHTSAATVAVLP-EAEDVDIEINANDLRIDTMRASGSGGQHVNTTDSAVRILH 242 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG++V E+SQH+N+ A +L+ +L++LE QK ++ K ++G G + Sbjct: 243 IPTGMIV-VSSEKSQHRNREIAMQVLKTRLFDLERQKVDDER--SADRKAQVGSGDRSER 299 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IR+Y P + D R N+ S + V+ GDL++ + A A Sbjct: 300 IRTYNF-PQGRMTDHRINLTLYSLNQVMQGDLEEIVNALQA 339 >gi|258544156|ref|ZP_05704390.1| peptide chain release factor 2 [Cardiobacterium hominis ATCC 15826] gi|258520598|gb|EEV89457.1| peptide chain release factor 2 [Cardiobacterium hominis ATCC 15826] Length = 250 Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats. Identities = 149/247 (60%), Positives = 186/247 (75%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SGE D N+A+L++ AG+GGTE+QDWA+MLLRMY RW E R FKTE +E G+ AGIK Sbjct: 1 MFSGELDPNNAFLDIQAGSGGTEAQDWASMLLRMYLRWGEARGFKTELIEESPGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ G AYGWL+ E GVHRLVR SP+DS +RRHTSF++++V P +DD+IEIEI+ + Sbjct: 61 SATIEFTGEYAYGWLRTEIGVHRLVRKSPFDSGNRRHTSFAAVFVSPEIDDNIEIEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D R+D YRASGAGGQHVN T+SAVRITH+PT +VVQ Q RSQH+N++ LRAKLYE Sbjct: 121 DLRVDVYRASGAGGQHVNRTESAVRITHLPTNIVVQSQNSRSQHENRSTCMKQLRAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LEL KR A E SK++IGWG QIRSYVL +KDLRT E ++ VLDG LD F Sbjct: 181 LELSKRSASAQAIEDSKSDIGWGNQIRSYVLD-QSRIKDLRTGYETSNTQAVLDGGLDPF 239 Query: 347 MKATLAI 353 ++A+L Sbjct: 240 LQASLKQ 246 >gi|218296205|ref|ZP_03496961.1| peptide chain release factor 1 [Thermus aquaticus Y51MC23] gi|218243277|gb|EED09807.1| peptide chain release factor 1 [Thermus aquaticus Y51MC23] Length = 354 Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats. Identities = 109/329 (33%), Positives = 170/329 (51%), Gaps = 8/329 (2%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI-LQETS 89 DP + ++ + L R + I+ I+E + L D + L + + + E Sbjct: 20 ADPEVLKDQKRYQALSRRYAEMGEIIALIREYRKVLEDLEGVESLLEDPELREVAKAEKE 79 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L R + + + L D DA +E+ AG GG E+ +A LL MY R+AE+ Sbjct: 80 ALLARKEALEKELERHLLPKDPMDERDAIVEIRAGTGGEEAALFARDLLEMYLRFAEEMG 139 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+TE L+ + + G ++GP AYG K E GVHR+ R+ ++ R HTS +++ Sbjct: 140 FETEILDSNPTDLGGFSKVVFEVRGPGAYGTFKYESGVHRVQRVPATETQGRIHTSTATV 199 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P ++S +++ + RID RASG GGQ VNTTDSAVR+ H+PTG++V CQ RSQ Sbjct: 200 AVLPKAEESD-FQLNMDEVRIDVMRASGPGGQGVNTTDSAVRVVHLPTGIMVTCQDSRSQ 258 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDL 326 KN+ +A +LR++L LE+++ EE + ++ +IG G + IR+Y P V D Sbjct: 259 IKNREKALMILRSRL--LEMKRAEEAEKLRQARLAQIGTGERSEKIRTYNF-PQSRVTDH 315 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R VL G L ++A + Sbjct: 316 RIGFTTHDLEGVLSGKLQPLLEALKRADQ 344 >gi|313885157|ref|ZP_07818909.1| peptide chain release factor 1 [Eremococcus coleocola ACS-139-V-Col8] gi|312619848|gb|EFR31285.1| peptide chain release factor 1 [Eremococcus coleocola ACS-139-V-Col8] Length = 359 Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats. Identities = 114/351 (32%), Positives = 175/351 (49%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ D+ + R +N DP + + + L E L + I+ ++ + Sbjct: 1 MFEQLDSLLIRYDEVNELLSDPIVIADSNRLRELTIEEADLRPKVEKIRRYKEVEAEIED 60 Query: 72 LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + EE D IL + + E + L D + +E+ AGG Sbjct: 61 TEAMLSEESDDDILAMAKEELASLKAENEQLQEDIKLLMLPEDPNDGKNIIMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+Q +A LL MYT++A+K+ +KTE L+ + G K TL+I G Y LK E G Sbjct: 121 DEAQLFAGDLLNMYTKYADKQGWKTEVLDANITGIGGYKEVTLMITGNKVYSKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + I+ E+ E+D R+D Y ASGAGGQHVN T Sbjct: 181 HRVQRVPQTESQGRVHTSTATVVVMP-EAEEIDFELDENDIRVDIYHASGAGGQHVNKTA 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPT VV Q ERSQ KN+ +A +LRA++Y+ + + + K ++G Sbjct: 240 SAVRLTHIPTNTVVAMQDERSQIKNREKAMKILRARVYD--QVRSQAQSEYDSERKLKVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + VL G+LD+ + A + + Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTLQQLDSVLSGNLDEIIDALVLYDQ 347 >gi|302334925|ref|YP_003800132.1| bacterial peptide chain release factor 1 (bRF-1) [Olsenella uli DSM 7084] gi|301318765|gb|ADK67252.1| bacterial peptide chain release factor 1 (bRF-1) [Olsenella uli DSM 7084] Length = 355 Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats. Identities = 117/349 (33%), Positives = 173/349 (49%), Gaps = 15/349 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L + DP + + E + +E ++ +E L D + E+ Sbjct: 5 LEKLIAAYEELEKRMVDPTVVSDPKEYARIAKEHASQAELVAKAREYVGALDDIEVAKEM 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 E D S + +++ + ++ + E D + +E+ AG GG E+ Sbjct: 65 QRETSDASEKEMLQEDIGANEAKLPALEDEIKVMLIPGDPNDEKNTIVEIRAGVGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MY R+A K+KTE L E G K+ + G + +K E GVHR+ Sbjct: 125 IFAGDLYNMYARFASTHKWKTEVLSSSPSEAGGFKTIEFKVTGDKVFSVMKFESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R TS +++ V P D I+IEI + D RIDTY ASG GGQ VNTT SAVR Sbjct: 185 RIPKTESQGRIQTSTATVAVLP-EADEIDIEIKDEDLRIDTYCASGPGGQCVNTTYSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PT VVQ Q +RSQ +N+A MLRA+LYE+EL+K++ G + +IG G Sbjct: 244 ITHLPTNTVVQSQDQRSQIQNRAVCMEMLRARLYEVELEKQQAEQ--GAARLGQIGHGSR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNI-EKTSPSDVLDGD-LDDFMKATLAIKK 355 +IR+Y QP V D R + VL GD L + + A A ++ Sbjct: 302 AEKIRTYN-QPQDRVTDHRIGFNSTYN--GVLLGDRLPEVIDALAAAER 347 >gi|254419936|ref|ZP_05033660.1| peptide chain release factor 1 [Brevundimonas sp. BAL3] gi|196186113|gb|EDX81089.1| peptide chain release factor 1 [Brevundimonas sp. BAL3] Length = 355 Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats. Identities = 110/344 (31%), Positives = 173/344 (50%), Gaps = 12/344 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + R + + + +E L +E L ++ + + L + Sbjct: 8 LDQVLDRFHEVEARMGAAT---DGVEIVRLSKEHAELKPVADAVQGLARLRAEMADLEVM 64 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 A + + ++ Q+ +L ++ A LEV AG GG E+ +A Sbjct: 65 AADPEMAAMAQDELRDLTERLPQMERDVALLLAPRDADENASAVLEVRAGTGGDEAALFA 124 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+A R ++ E +G+ G K + G +G LK E GVHR+ R+ Sbjct: 125 GDLFRMYSRYAATRGWRIELDSATEGDAGGYKEIIATVTGDGVFGRLKFESGVHRVQRVP 184 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS +++ V P + +EIEI E D RIDT+RASG+GGQHVN TDSAVRITH Sbjct: 185 TTEAGGRIHTSAATVAVLP-EVEDVEIEILEKDIRIDTFRASGSGGQHVNKTDSAVRITH 243 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+V E+SQH N+ +A LR +LY+ +Q++ + +S K+++G G + Sbjct: 244 LPTGIVATSS-EKSQHVNRDKAMKNLRVRLYD--MQRQAKDLARADSRKSQVGSGDRSER 300 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R + S +L+GDLD + A +A + Sbjct: 301 IRTYNF-PQGRVTDHRIGLTLHSLPQILEGDLDPMLNALIAEDQ 343 >gi|312897943|ref|ZP_07757356.1| peptide chain release factor 1 [Megasphaera micronuciformis F0359] gi|310620977|gb|EFQ04524.1| peptide chain release factor 1 [Megasphaera micronuciformis F0359] Length = 361 Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats. Identities = 107/348 (30%), Positives = 186/348 (53%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72 + L + DP + E + L +E L I ++ +D + D+ + Sbjct: 6 VQAVENKFIDLEQRISDPSVIARQDEWQKLTKEHASLAPIIETFRKYKDVSATIADDKEI 65 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131 + + + ++ +E L + + +E + L D + +E+ GAGG E+ Sbjct: 66 IADGSDAELTAMAKEELSELTKEQEALEEELHVLMLPKDPNDDKNVIMEIRGGAGGDEAA 125 Query: 132 DWANMLLRMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY+++ E ++ +K + + E G K ++G YG LK E GVHR+ Sbjct: 126 IFAGDLFRMYSKYIEKQKGWKASIISSNAPELGGYKEVIFSVEGDGVYGKLKYESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +EI ++ D R+D +RASGAGGQHVN T SAV Sbjct: 186 QRVPVTESGGRIHTSTATVAVLP-EAEDVEINLNMEDVRVDYFRASGAGGQHVNKTSSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+THIP+G+VV+CQ ERSQ +N+A+A +L+A+L L + E A + E+ ++++G G Sbjct: 245 RMTHIPSGIVVECQDERSQLENRAKAVRVLKARL--LAQAEEEANAEVTEARRSQVGTGD 302 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 ++R+Y P V D R N+ ++++GD+D+F++A ++ Sbjct: 303 RSERVRTYNY-PQGRVTDHRINLTLYKLENIMNGDIDEFIQALAEARR 349 >gi|304311492|ref|YP_003811090.1| peptide chain release factor 1 [gamma proteobacterium HdN1] gi|301797225|emb|CBL45445.1| peptide chain release factor 1 [gamma proteobacterium HdN1] Length = 362 Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats. Identities = 106/341 (31%), Positives = 176/341 (51%), Gaps = 9/341 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R + + + + + + L +E L+ ++ + + L D + +L Sbjct: 9 LESIAERHEEVAALLSEGSVISDQNQFRKLSQEYAELEPVVTCFADYRKVLADITLARQL 68 Query: 76 ALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + Q L D + YLE+ AG GG E+ Sbjct: 69 MEDSDPEMREMGAEELRTGQAQRDQFELDLQKLMLPKDPNDGRNVYLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AE ++ E + H+GE G K + G + Y LK E G HR+ R Sbjct: 129 FAGDLFRMYSRYAESCGWRVEVISEHEGEHGGYKEIISRVSGDSVYSKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P D+ +I+I D ++DTYR++GAGGQHVNTTDSAVR+ Sbjct: 189 VPVTEAQGRIHTSACTVAVLPEADEIGDIDIRPEDLKMDTYRSTGAGGQHVNTTDSAVRL 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG VV+CQ+ERSQHKN+A+A +LRA+L + E+ + +G G Sbjct: 249 THLPTGTVVECQEERSQHKNRAKALALLRARLLSNAQD--AQTRQTSEARRQLVGSGDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P + D R N+ +++++GDL + +++ Sbjct: 307 ERIRTYNF-PQGRLTDHRINLTLYRLNEIVEGDLSEVVQSL 346 >gi|163788169|ref|ZP_02182615.1| peptide chain release factor RF-2 [Flavobacteriales bacterium ALC-1] gi|159876489|gb|EDP70547.1| peptide chain release factor RF-2 [Flavobacteriales bacterium ALC-1] Length = 315 Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats. Identities = 142/308 (46%), Positives = 208/308 (67%), Gaps = 2/308 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ + + ++ Q D ++ E E++ E + E +F+ Sbjct: 1 MKSIREKKSWVNDYNAAQTLYEDLEVIYEFYKEDEAPMENVENRFEKAVNAI--EKLEFK 58 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++LS E DS A L++ AGAGGTES DWA+ML+RMY +AEK FK + L +G+ AGI Sbjct: 59 NMLSEEGDSLSAVLQITAGAGGTESCDWASMLMRMYLMYAEKSGFKVKELNHQEGDVAGI 118 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ TL I+G A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDSIEIEI+ Sbjct: 119 KTVTLEIEGEYAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIEINP 178 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D I T R+SGAGGQ+VN ++ V++ H P+G+ +QC + RSQH N+ +A ML+++LY Sbjct: 179 ADIEITTARSSGAGGQNVNKVETKVQLHHKPSGIQIQCSETRSQHDNRTRAMQMLKSQLY 238 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+ELQK+ + E+ K +I WG QIR+YV+ PY++VKD+R+ E + V+DGD++ Sbjct: 239 EIELQKQMAQRDDIEAGKMKIEWGSQIRNYVMHPYKLVKDVRSAHETGNVDAVMDGDIEP 298 Query: 346 FMKATLAI 353 F+KA L + Sbjct: 299 FLKAYLMM 306 >gi|21223720|ref|NP_629499.1| peptide chain release factor 1 [Streptomyces coelicolor A3(2)] gi|256785187|ref|ZP_05523618.1| peptide chain release factor 1 [Streptomyces lividans TK24] gi|289769080|ref|ZP_06528458.1| peptide chain release factor 1 [Streptomyces lividans TK24] gi|20139352|sp|Q9K4E4|RF1_STRCO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|8568782|emb|CAB94531.1| peptide chain release factor 1 (RF-1) [Streptomyces coelicolor A3(2)] gi|289699279|gb|EFD66708.1| peptide chain release factor 1 [Streptomyces lividans TK24] Length = 358 Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats. Identities = 118/350 (33%), Positives = 175/350 (50%), Gaps = 16/350 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + V + L K DP + + A+ L + L ++ + + D Sbjct: 1 MFEAVEELVAEHADLEKKLADPSVHSDQANARKLNKRYAELTPIVATFRSWKQTGDDMET 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E DD E + ++ E + + +D D LE+ AGAGG ES Sbjct: 61 AREF--AADDPDFAAEVKELDKQRDELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG----------PNAYGWL 181 +A LLRMY R+AE+ +KTE ++ + E G K + +K + L Sbjct: 119 LFAGDLLRMYLRYAERIGWKTEIIDSTESELGGYKDVQVAVKTKGGQGATEPGQGVWARL 178 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHR+ R+ +S R HTS + + V P + I++EI+ +D RID YR+SG GGQ Sbjct: 179 KYEGGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEIDVEINPNDLRIDVYRSSGPGGQ 237 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITHIPTGVV CQ E+SQ +NK QA +LR++L ++ E+ A Sbjct: 238 SVNTTDSAVRITHIPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAEKEAADARR 297 Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 S+ + +IR+Y P + D R + + VLDGDLD ++A Sbjct: 298 SQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLDSVIQAC 346 >gi|256158374|ref|ZP_05456272.1| peptide chain release factor 1 [Brucella ceti M490/95/1] gi|256253793|ref|ZP_05459329.1| peptide chain release factor 1 [Brucella ceti B1/94] gi|260169300|ref|ZP_05756111.1| peptide chain release factor 1 [Brucella sp. F5/99] gi|261758813|ref|ZP_06002522.1| peptide chain release factor 1 [Brucella sp. F5/99] gi|261738797|gb|EEY26793.1| peptide chain release factor 1 [Brucella sp. F5/99] Length = 359 Score = 215 bits (547), Expect = 8e-54, Method: Composition-based stats. Identities = 116/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R S + ++ + P + L E L + + I+E+ D + L + Sbjct: 10 DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + ++ + + + Q L AD +A LE+ AG GG E+ Sbjct: 66 RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A ++ ++ E + +G+ G K + G + LK E GVHR+ Sbjct: 126 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSTLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + I+IEI D RIDT RASGAGGQHVNTTDSAV Sbjct: 186 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG++V Q E+SQH+N+A+A +LRA+LY++E QK + ++ ++++G G Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V++GDLD+ + A ++ + Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQ 348 >gi|148657451|ref|YP_001277656.1| peptide chain release factor 2 [Roseiflexus sp. RS-1] gi|148569561|gb|ABQ91706.1| bacterial peptide chain release factor 2 (bRF-2) [Roseiflexus sp. RS-1] Length = 317 Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats. Identities = 142/311 (45%), Positives = 196/311 (63%), Gaps = 3/311 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ L + I+ I +L L+ELA EDD S+ + + L+R +E + E Sbjct: 1 MQRLTRLKEEVERIEAIDRQLTALADLIELAAAEDDDSLQADIAAELKRTGEAIEALEIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LL+G D DA+L + AG GGT++QDWA MLLRMY RW E+R F+ ++ +GEEAGI Sbjct: 61 VLLNGPYDDRDAFLSIKAGTGGTDAQDWAEMLLRMYMRWGERRGFQVALIDKSEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ ++GP AYG K E GVHRL+R+SP+++ + R TSF+ + V P VDD+ E+ I Sbjct: 121 KSATIELRGPYAYGSAKAEAGVHRLIRLSPFNAGNTRQTSFAMVEVLPEVDDAPEVVIRP 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIP---TGVVVQCQQERSQHKNKAQAWNMLRA 282 D RID +R+SG GGQ VNTTDSAVRIT+ P +VV CQ ERSQ +N+ A +LR Sbjct: 181 EDIRIDVFRSSGHGGQGVNTTDSAVRITYKPGTPEQIVVTCQNERSQLQNRETAMRVLRG 240 Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 +L E ELQ++ E + +G Q+R+Y L PY +VKD RT+ E + VLDGD Sbjct: 241 RLLERELQRKREERARLRGEYRQADFGNQMRTYYLHPYTLVKDHRTDHETSDVHAVLDGD 300 Query: 343 LDDFMKATLAI 353 +D F++A L Sbjct: 301 IDPFIEAYLRW 311 >gi|326318376|ref|YP_004236048.1| peptide chain release factor 1 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375212|gb|ADX47481.1| peptide chain release factor 1 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 360 Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats. Identities = 111/344 (32%), Positives = 171/344 (49%), Gaps = 9/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + QRL L+ + ++ + + + RE + + R D E+ Sbjct: 9 LERYAQRLEELDFLLSREDIMSDMAQYRTISREHAEVTQIAGRYARYRQREADLAGAREM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTESQDW 133 + D + + + +L + + LL +A+LE+ AG GG ES + Sbjct: 69 LDDPD-MADMAREEISAAEAELVQLEDELQRLLLPRDPDEARNAFLEIRAGTGGDESALF 127 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A L RMYTR+A +K E L D E G K L ++G YG L+ E G HR+ R+ Sbjct: 128 AGDLARMYTRYAATAGWKVEILSASDNEIGGYKEVVLRVEGDGVYGALRFESGGHRVQRV 187 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 ++ R HTS ++ V P D+ I ++ +D RIDT+RASGAGGQH+N TDSAVR+ Sbjct: 188 PATETQGRIHTSACTVAVMPEPDEQQAITLNPADLRIDTFRASGAGGQHINKTDSAVRVV 247 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H+PTG+V +CQ RSQH NKA+A +L+A++ E E +R A K +G G Sbjct: 248 HLPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSER--AAKEAALRKGLVGSGDRSD 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D R N+ +++GDL + + A + Sbjct: 306 RIRTYNF-PQGRLTDHRINLTLYKLLAIMEGDLGEVLDALRHAR 348 >gi|315125019|ref|YP_004067023.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315018741|gb|ADT66834.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 355 Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats. Identities = 114/345 (33%), Positives = 179/345 (51%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R LN+ + ++ + L +E+++L+ + KE L + L Sbjct: 6 LDPFLKRFEELNSLLSSSDIINDISKMTTLSKEQKNLEPIVLKAKEYLKTLDNIEENKAL 65 Query: 76 ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + +E + E + L D + +LE+ AG GG E+ + Sbjct: 66 LNDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGTGGDEASLFV 125 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L++ Y R+AE R +K E + +G G K +L+KG AY LK E G HR+ R+ Sbjct: 126 GDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHRVQRVP 185 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P D IEIEI+ +D ++D R+SG GGQ VNTTDSAVRITH Sbjct: 186 QTESQGRVHTSAITVAVMP-EVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVRITH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV Q +SQHKNK A +L+A+LY E+Q+ E +A E+ K+++G G + Sbjct: 245 IPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQESERLAKESEARKSQVGSGDRSER 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++ DG D+ ++ + + Sbjct: 303 IRTYNF-PQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQ 346 >gi|254717939|ref|ZP_05179750.1| peptide chain release factor 1 [Brucella sp. 83/13] Length = 351 Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats. Identities = 116/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R S + ++ + P + L E L + + I+E+ D + L + Sbjct: 2 DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARKEASDLAAM 57 Query: 76 ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + ++ + + + Q L AD +A LE+ AG GG E+ Sbjct: 58 RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 117 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A ++ ++ E + +G+ G K + G + LK E GVHR+ Sbjct: 118 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 177 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + I+IEI D RIDT RASGAGGQHVNTTDSAV Sbjct: 178 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 236 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG++V Q E+SQH+N+A+A +LRA+LY++E QK + ++ ++++G G Sbjct: 237 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 293 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V++GDLD+ + A ++ + Sbjct: 294 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVNALISDHQ 340 >gi|300361412|ref|ZP_07057589.1| peptide chain release factor RF1 [Lactobacillus gasseri JV-V03] gi|300354031|gb|EFJ69902.1| peptide chain release factor RF1 [Lactobacillus gasseri JV-V03] Length = 362 Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats. Identities = 96/342 (28%), Positives = 166/342 (48%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V L DP + + + +E + + ++ + + + E+ Sbjct: 8 LEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADMREVVQKYRKYKSDIKEIDDNKEI 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D +++ + ++ EV + L D D +E+ AGG E+ Sbjct: 68 ISSESDDDLVEMAKEENFELEKEVAELEDEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY ++AE + +K ++ E G K ++I G Y LK E G HR+ Sbjct: 128 LFAGDLLRMYEKYAETQGWKVSLIDSEPTEVGGYKRVAVMITGDKVYSKLKYENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + ++I++ D R+D YR+SGAGGQH+N T SAVR Sbjct: 188 RVPVTESQGRVHTSTATVAVMP-EYEQVDIDLDPKDIRVDVYRSSGAGGQHINKTSSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q +RSQ +N+ +A +L++++Y+ + + K +G G Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNRD--KYDAKRKDAVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R + V++G+LD+ + A Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTLNKLDRVMNGELDEIINAL 345 >gi|282859526|ref|ZP_06268631.1| peptide chain release factor 1 [Prevotella bivia JCVIHMP010] gi|282587754|gb|EFB92954.1| peptide chain release factor 1 [Prevotella bivia JCVIHMP010] Length = 370 Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats. Identities = 91/359 (25%), Positives = 158/359 (44%), Gaps = 20/359 (5%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + D D R ++T DP + + L RE + L + + K L Sbjct: 6 SILDKLDGLEARFEEVSTLITDPDVIGDQARYVKLTREYKDLGDIMDARKRYIACLSTIK 65 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAG 126 ++ E D + + + L + + + D+ + +EV AG G Sbjct: 66 EAKDILANESDPDMKEMAREELSENETLQPKLEEEIKILLVPKDPEDAKNVQMEVRAGTG 125 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A + MY R+ +K+ + ++++G G K + G YG LK E G Sbjct: 126 GDEAALFAGDIFNMYKRFCDKKGWTLSVTDVNEGAVGGFKEIDFAVSGDGVYGILKYESG 185 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ D+ R TS +++ V P D I+E D + DT+R+SGAGGQ+VN Sbjct: 186 VHRVQRVPSTDTQGRMQTSAATVAVLPEADRFEVN-INEGDIKWDTFRSSGAGGQNVNKV 244 Query: 247 DSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 +S VR+ + ++++C + R Q KNK +A + LR +Y+ E QK + +I Sbjct: 245 ESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLRTFIYDREHQKY--VDDI 302 Query: 299 GESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+ + G + IR+Y P V D R ++G++ + + A + Sbjct: 303 ANRRKSLVSTGDRSAKIRTYNY-PQGRVTDHRIGYTTHDLPGFMNGNIQEMIDALTVAE 360 >gi|167581337|ref|ZP_02374211.1| peptide chain release factor 2, programmed [Burkholderia thailandensis TXDOH] gi|167619419|ref|ZP_02388050.1| peptide chain release factor 2, programmed [Burkholderia thailandensis Bt4] gi|257138616|ref|ZP_05586878.1| peptide chain release factor 2 [Burkholderia thailandensis E264] Length = 248 Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats. Identities = 149/247 (60%), Positives = 196/247 (79%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK Sbjct: 1 MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 +AT+ + G AYG+L+ E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ + Sbjct: 61 NATIKVSGDYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++L+E Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 EL+KR+ + ESSKT++GWG QIRSYVL VKDLRTN+E ++ VLDGDLDDF Sbjct: 181 AELRKRQAEQDKLESSKTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTKAVLDGDLDDF 239 Query: 347 MKATLAI 353 + A+L Sbjct: 240 ISASLKQ 246 >gi|265982882|ref|ZP_06095617.1| peptide chain release factor 1 [Brucella sp. 83/13] gi|306838261|ref|ZP_07471111.1| peptide chain release factor 1 [Brucella sp. NF 2653] gi|264661474|gb|EEZ31735.1| peptide chain release factor 1 [Brucella sp. 83/13] gi|306406664|gb|EFM62893.1| peptide chain release factor 1 [Brucella sp. NF 2653] Length = 359 Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats. Identities = 116/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R S + ++ + P + L E L + + I+E+ D + L + Sbjct: 10 DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARKEASDLAAM 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + ++ + + + Q L AD +A LE+ AG GG E+ Sbjct: 66 RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A ++ ++ E + +G+ G K + G + LK E GVHR+ Sbjct: 126 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + I+IEI D RIDT RASGAGGQHVNTTDSAV Sbjct: 186 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG++V Q E+SQH+N+A+A +LRA+LY++E QK + ++ ++++G G Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V++GDLD+ + A ++ + Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVNALISDHQ 348 >gi|57238625|ref|YP_179756.1| peptide chain release factor 1 [Campylobacter jejuni RM1221] gi|73621534|sp|Q5HSH9|RF1_CAMJR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|57167429|gb|AAW36208.1| peptide chain release factor 1 [Campylobacter jejuni RM1221] gi|315059063|gb|ADT73392.1| Peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni S3] Length = 355 Score = 215 bits (547), Expect = 9e-54, Method: Composition-based stats. Identities = 115/345 (33%), Positives = 180/345 (52%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R LN+ + ++ + L +E+++L+ + KE L + L Sbjct: 6 LDPFLKRFEELNSLLSSSDIINDISKMTTLSKEQKNLEPIVLKAKEYLKTLDNIEENKAL 65 Query: 76 ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + +E + E + L D + +LE+ AGAGG E+ + Sbjct: 66 LNDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGAGGDEASLFV 125 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L++ Y R+AE R +K E + +G G K +L+KG AY LK E G HR+ R+ Sbjct: 126 GDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHRVQRVP 185 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P D IEIEI+ +D ++D R+SG GGQ VNTTDSAVRITH Sbjct: 186 QTESQGRVHTSAITVAVMP-EVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVRITH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV Q +SQHKNK A +L+A+LY E+Q+ E +A E+ K+++G G + Sbjct: 245 IPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQESERLAKESEARKSQVGSGDRSER 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++ DG D+ ++ + + Sbjct: 303 IRTYNF-PQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQ 346 >gi|302381433|ref|YP_003817256.1| peptide chain release factor 1 [Brevundimonas subvibrioides ATCC 15264] gi|302192061|gb|ADK99632.1| peptide chain release factor 1 [Brevundimonas subvibrioides ATCC 15264] Length = 367 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 106/344 (30%), Positives = 170/344 (49%), Gaps = 12/344 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + R + + + E L +E + + + + L + Sbjct: 20 LDQVLDRFHQVEARMGA---ASDGQEIVRLSKEHAEMKPVADAVLALAKARTEIEELQAM 76 Query: 76 ALEEDDCSILQET-SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + +++ + R+ ++ A LEV AG GG E+ +A Sbjct: 77 TADPEMAAMVADELETLNARLPEMERDVALLLAPRDADENASAVLEVRAGTGGDEAALFA 136 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+A R +K E +G+ G K + G +G LK E GVHR+ R+ Sbjct: 137 GDLFRMYSRYASTRGWKVELDSATEGDAGGYKEIIATVTGDGVFGRLKFESGVHRVQRVP 196 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS +++ V P + +EI+I + D RIDTYRASG+GGQHVN TDSAVRITH Sbjct: 197 TTEAGGRIHTSAATVAVLP-EVEDVEIDIQDKDIRIDTYRASGSGGQHVNKTDSAVRITH 255 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 P+G+VV E+SQH N+ +A LR +LY+ +Q++ + ++ K+++G G + Sbjct: 256 FPSGIVVTSS-EKSQHVNRDKAMKNLRVRLYD--MQRQMKDNARSDARKSQVGSGDRSER 312 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R + S +L+GDLD + A +A + Sbjct: 313 IRTYNF-PQGRVTDHRIGLTLHSLPQILEGDLDALLNALIAEDQ 355 >gi|237756512|ref|ZP_04585042.1| peptide chain release factor 1 [Sulfurihydrogenibium yellowstonense SS-5] gi|237691328|gb|EEP60406.1| peptide chain release factor 1 [Sulfurihydrogenibium yellowstonense SS-5] Length = 360 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 124/346 (35%), Positives = 186/346 (53%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++L L DP + ++ + + + +E + L ++ E + + +L Sbjct: 9 LEGIEEKLKKLEELMADPEVLKDQSKIQSIAKEHKELSEILNLYNEYKKVNRQIEEVKQL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 D + + + L+ +K E + + D + LE+ GAGG E+ Sbjct: 69 LNSTPDDDLRELAEEELESLKKHREDLEKKIEIALLPKDPNDERNVILEIRQGAGGDEAS 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R+AE+ +KTE L +H E+ GIK LIKG AY LK E GVHR+ Sbjct: 129 LFAAELFRMYQRYAERHGWKTEILSLHPTEKGGIKEVIALIKGKGAYSRLKYESGVHRVQ 188 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S+ R HTS ++ V P + ++IEI + RI+T RA GAGGQHVNTTDSAVR Sbjct: 189 RVPETESSGRIHTSTVTVAVLP-EAEEVDIEIKPEELRIETMRAGGAGGQHVNTTDSAVR 247 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPTG+VV CQ ERSQ +NK +A +LRA+L + +R E I + K ++G G + Sbjct: 248 ITHIPTGMVVTCQDERSQLQNKMKAMQILRARLKDYY--ERLEKEKIAKERKEQVGTGER 305 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P V D R N +D++DGDLD+ + +A + Sbjct: 306 SEKIRTYNF-PQNRVTDHRVNYTSYRINDIMDGDLDEIIDVLIAKE 350 >gi|312890071|ref|ZP_07749615.1| bacterial peptide chain release factor 1 (bRF-1) [Mucilaginibacter paludis DSM 18603] gi|311297603|gb|EFQ74728.1| bacterial peptide chain release factor 1 (bRF-1) [Mucilaginibacter paludis DSM 18603] Length = 357 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 108/346 (31%), Positives = 177/346 (51%), Gaps = 12/346 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN-- 69 + D + +R + + P + +++ + +E + L + + + + Sbjct: 1 MLDKLEAIKERWQDVERELSSPDIMKDMKRFAQMNKEYKDLTKVVEQYNIYYNVMSNIDS 60 Query: 70 --LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 IL +E E + L + + E + + DS +A +E+ G GG Sbjct: 61 NREILATEKDDEFREMAKAELDELLPQQEELEEKIRLMLIPKDPEDSRNAIVEIRGGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY R+ EK+ +KTE ++ +G G K + +AYG LK E GV Sbjct: 121 DEAALFAGDLYRMYIRFCEKQGWKTELVDFTEGTAGGYKEIVFNVLAEDAYGTLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS +S+ V P D+ I +D R D + ASG GGQ VNTT Sbjct: 181 HRVQRVPDTETQGRVHTSAASVVVLPEADEFDVD-IHVNDIRKDLFCASGPGGQSVNTTY 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+V QCQ ++SQ KN +A +LR+++YE+ELQK E+ I + KT + Sbjct: 240 SAVRLTHLPTGIVAQCQDQKSQLKNYDKALQVLRSRIYEMELQKHLEV--ISKKRKTMVS 297 Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G + IR+Y P V + R + + +V++G+L + M+A Sbjct: 298 TGDRSAKIRTYNY-PQGRVTEHRIGLTIYNLPEVMNGNLLEIMEAL 342 >gi|282861117|ref|ZP_06270182.1| peptide chain release factor 1 [Streptomyces sp. ACTE] gi|282563775|gb|EFB69312.1| peptide chain release factor 1 [Streptomyces sp. ACTE] Length = 358 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 116/350 (33%), Positives = 175/350 (50%), Gaps = 16/350 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + + + L K DP + + A+ L + L IS + + D Sbjct: 1 MFEAVEELIGEHADLEKKLSDPSVHADQANARKLNKRYAELTPVISTYRAWKRTGDDIET 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E DD E + ++ + E + + +D D LE+ AGAGG ES Sbjct: 61 AREF--AADDPDFAAEVKELEKQREEITEKLRLLLVPRDPSDDKDVLLEIKAGAGGDESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG----------PNAYGWL 181 +A LLRMY R+AE+ +KTE ++ + E G K + +K + + Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVAVKTKGGNGATEPGQGVWARM 178 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHR+ R+ +S R HTS + + V P + +++EI +D RID YR+SG GGQ Sbjct: 179 KYEGGVHRVQRVPSTESQGRIHTSAAGVLVTP-EAEEVDVEIHANDLRIDVYRSSGPGGQ 237 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PTGVV CQ E+SQ +NK QA +LR++L + E+ A+ Sbjct: 238 SVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEAAEQEASDVRR 297 Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 S+ + +IR+Y P + D R + + VLDGDLD ++A Sbjct: 298 SQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLDAVIQAC 346 >gi|332525328|ref|ZP_08401493.1| hypothetical protein RBXJA2T_05833 [Rubrivivax benzoatilyticus JA2] gi|332108602|gb|EGJ09826.1| hypothetical protein RBXJA2T_05833 [Rubrivivax benzoatilyticus JA2] Length = 248 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 143/247 (57%), Positives = 191/247 (77%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + + AD ++ ++++ AGAGGTE+ DWA+MLLR Y ++ EK+ FK E +E +G+ AGI+ Sbjct: 1 MFANPADPSNCFIDIQAGAGGTEACDWASMLLRQYLKYCEKKGFKAEVMEETEGDVAGIR 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SATL I+G A+G L+ E GVHRLVR SP+DS RHTSF+S++VYP VDDSIEIEI+ + Sbjct: 61 SATLKIEGDYAFGHLRTETGVHRLVRKSPFDSAGGRHTSFASLFVYPEVDDSIEIEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D R DT+RASGAGGQH+N TDSAVR+THIPTG+VVQCQ +RSQH+N+ +AW MLR++LYE Sbjct: 121 DVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIVVQCQNDRSQHRNRDEAWAMLRSRLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 E++K+ E E SKT++GWG QIRSYVL +KDLRT +E ++ VLDGDLD F Sbjct: 181 HEMRKQMEAQQKLEDSKTDVGWGHQIRSYVLD-QSRIKDLRTGVEISNTQKVLDGDLDPF 239 Query: 347 MKATLAI 353 ++A+L Sbjct: 240 IEASLKQ 246 >gi|329943005|ref|ZP_08291779.1| peptide chain release factor 1 [Chlamydophila psittaci Cal10] gi|332287587|ref|YP_004422488.1| peptide chain release factor 1 [Chlamydophila psittaci 6BC] gi|313848161|emb|CBY17162.1| peptide chain release factor 1 [Chlamydophila psittaci RD1] gi|325506915|gb|ADZ18553.1| peptide chain release factor 1 [Chlamydophila psittaci 6BC] gi|328814552|gb|EGF84542.1| peptide chain release factor 1 [Chlamydophila psittaci Cal10] gi|328914838|gb|AEB55671.1| peptide chain release factor 1 [Chlamydophila psittaci 6BC] Length = 361 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 111/340 (32%), Positives = 177/340 (52%), Gaps = 11/340 (3%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLELAL 77 +RL + K +P ++ N E +L +E L + + + L D+ L Sbjct: 10 KRLEEVEAKISNPEIFDNPKEYSLLSKEHARLSELKNTYDRVVAQEKILSDDKQALAQEK 69 Query: 78 EEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 + + ++L+E + + ++ + + D + +E+ AG GG E+ + Sbjct: 70 DPEMIAMLEEGIQSGKAEVDKLYKILENLLVPPDPDDDLNVIMELRAGTGGDEAALFVGD 129 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 +RMY +A + +K E L + + G K + I G L+ E G HR+ R+ Sbjct: 130 CVRMYHLYASAKGWKYEVLSASESDIGGYKEYVMGISGTGVKRLLQYEAGTHRVQRVPET 189 Query: 197 DSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 ++ R HTS ++ V P ++ E+ I E D +IDT+RASGAGGQHVN TDSAVRITH+ Sbjct: 190 ETQGRVHTSAITVAVLPEPAENDEEVFIDEKDLKIDTFRASGAGGQHVNVTDSAVRITHL 249 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTGVVV CQ ERSQHKNKA+A +L+A++ + E+Q+R + A+ S ++G G +I Sbjct: 250 PTGVVVTCQDERSQHKNKAKAMRILKARIRDAEMQRRHKEASAMRS--AQVGSGDRSERI 307 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 R+Y V D R + S V++GDLD A ++ Sbjct: 308 RTYNFS-QNRVTDHRIGLTLYSLDKVMEGDLDTITSALVS 346 >gi|189499090|ref|YP_001958560.1| peptide chain release factor 1 [Chlorobium phaeobacteroides BS1] gi|189494531|gb|ACE03079.1| peptide chain release factor 1 [Chlorobium phaeobacteroides BS1] Length = 357 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 105/343 (30%), Positives = 177/343 (51%), Gaps = 12/343 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L + DP + + + L +E L + + + ++ Sbjct: 5 LEALKDKYLRLEEQLSDPEIIADQKRFRKLNKEYSDLKEIVQGYDRYKSNKVQIEEVRKM 64 Query: 76 ALEEDDCSI----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 +E D + L E + + + + L EADS + +E+ AG GG E+ Sbjct: 65 LKQETDPEMKSLALVELEELQELQPELDQQLKLLLLPKEEADSRNVIIEIRAGTGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LLRMY ++AE++ +K + +E ++ G K A L I G + Y +K E GVHR+ Sbjct: 125 LFATDLLRMYQKFAERKGWKCDMMEFNEASIPGACKEAILSISGHDVYATMKFESGVHRV 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +S+ V P + ++IEI + D ++DT+R+ G GGQ+VN ++AV Sbjct: 185 QRVPETETQGRIHTSAASVAVLP-EAEDVDIEIRKDDLQLDTFRSGGKGGQNVNKVETAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH P+G+VV CQ+ERSQ +N+ +A MLRAKLY+ +L ++ ++ + G Sbjct: 244 RITHTPSGIVVACQEERSQLQNRERAMKMLRAKLYDQQLAEKNRERADL--RRSMVTTGD 301 Query: 311 Q---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 + IR+Y P V D R + +L+G+LDD ++A Sbjct: 302 RSAKIRTYNF-PQSRVTDHRIGYTSHALPQILEGNLDDIIEAL 343 >gi|116629883|ref|YP_815055.1| peptide chain release factor 1 [Lactobacillus gasseri ATCC 33323] gi|238853674|ref|ZP_04644042.1| peptide chain release factor 1 [Lactobacillus gasseri 202-4] gi|282851601|ref|ZP_06260966.1| peptide chain release factor 1 [Lactobacillus gasseri 224-1] gi|311110481|ref|ZP_07711878.1| peptide chain release factor 1 [Lactobacillus gasseri MV-22] gi|122273179|sp|Q042K5|RF1_LACGA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|116095465|gb|ABJ60617.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus gasseri ATCC 33323] gi|238833712|gb|EEQ25981.1| peptide chain release factor 1 [Lactobacillus gasseri 202-4] gi|282557569|gb|EFB63166.1| peptide chain release factor 1 [Lactobacillus gasseri 224-1] gi|311065635|gb|EFQ45975.1| peptide chain release factor 1 [Lactobacillus gasseri MV-22] Length = 362 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 96/342 (28%), Positives = 166/342 (48%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V L DP + + + +E + + ++ + + + E+ Sbjct: 8 LEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADMREVVQKYRKYKSDIKEIDDNKEI 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D +++ + ++ EV + L D D +E+ AGG E+ Sbjct: 68 ISSESDDDLVEMAKEENSELEKEVAKLEDEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY ++AE + +K ++ E G K ++I G Y LK E G HR+ Sbjct: 128 LFAGDLLRMYEKYAETQGWKVSLIDSEPTEVGGYKRVAVMITGDKVYSKLKYENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + ++I++ D R+D YR+SGAGGQH+N T SAVR Sbjct: 188 RVPVTESQGRVHTSTATVAVMP-EYEQVDIDLDPKDIRVDVYRSSGAGGQHINKTSSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q +RSQ +N+ +A +L++++Y+ + + K +G G Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNRD--KYDAKRKDAVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R + V++G+LD+ + A Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTLNKLDRVMNGELDEIINAL 345 >gi|86152633|ref|ZP_01070838.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843518|gb|EAQ60728.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni HB93-13] Length = 355 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 114/345 (33%), Positives = 180/345 (52%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R LN+ + ++ + L +E+++L+ + +KE L + L Sbjct: 6 LDPFLRRFEELNSLLSSSDIINDISKMTTLSKEQKNLEPIVLKVKEYLKTLDNIEENKAL 65 Query: 76 ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + +E + E + L D + +LE+ AG GG E+ + Sbjct: 66 LNDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGTGGDEASLFV 125 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L++ Y R+AE R +K E + +G G K +L+KG AY LK E G HR+ R+ Sbjct: 126 GDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHRVQRVP 185 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P D IEIEI+ +D ++D R+SG GGQ VNTTDSAVRITH Sbjct: 186 QTESQGRVHTSAITVAVMP-EVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVRITH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV Q +SQHKNK A +L+A+LY E+Q+ E +A E+ K+++G G + Sbjct: 245 IPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQESERLAKESEARKSQVGSGDRSER 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++ DG D+ ++ + + Sbjct: 303 IRTYNF-PQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQ 346 >gi|167837158|ref|ZP_02464041.1| peptide chain release factor 2, programmed [Burkholderia thailandensis MSMB43] Length = 248 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 148/247 (59%), Positives = 196/247 (79%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK Sbjct: 1 MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 +AT+ + G AYG+L+ E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+E++ + Sbjct: 61 NATIKVSGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++L+E Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 EL+KR+ + ESSKT++GWG QIRSYVL VKDLRTN+E ++ VLDGDLDDF Sbjct: 181 AELRKRQAEQDKLESSKTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTKAVLDGDLDDF 239 Query: 347 MKATLAI 353 + A+L Sbjct: 240 ISASLKQ 246 >gi|313113834|ref|ZP_07799401.1| peptide chain release factor 1 [Faecalibacterium cf. prausnitzii KLE1255] gi|310623861|gb|EFQ07249.1| peptide chain release factor 1 [Faecalibacterium cf. prausnitzii KLE1255] Length = 363 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 105/348 (30%), Positives = 177/348 (50%), Gaps = 13/348 (3%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D R L+ + P + + LMRE + + + Q L Sbjct: 9 DAVCHRFEELSIRLNQPDTAADPALFRRLMREYHDAEPVVQAYRAWQTAQDHLAQAKALL 68 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFES------LLSGEADSNDAYLEVHAGAGGTES 130 E + + + + ++ E+ L D + +E+ GAGG E+ Sbjct: 69 EEPGALDPDFKQMIQQEISEKSQDVEKLENNLKILLLPKDVNDGKNVIVEIRGGAGGEEA 128 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A+ LLRMYT + + R ++ E L +++ E G+K A + G AY LK E GVHR+ Sbjct: 129 ALFAHSLLRMYTMYVQSRGWQLEMLNLNETELGGVKEAIFSVDGAGAYNRLKYESGVHRV 188 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + ++ + D RIDT+R+SGAGGQH+N T SA+ Sbjct: 189 QRVPETETQGRIHTSTATVAVMPQ-AEEVDFALDMKDLRIDTFRSSGAGGQHINKTSSAI 247 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+TH+PTG+VV+CQ ERSQ +NK +A +LR++L L +++++ I S + ++G G Sbjct: 248 RVTHLPTGMVVECQNERSQFQNKDKALEILRSRL--LAQKQKQQQDAINASRQGQVGTGD 305 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P D R + + S ++DG+LD+ + A ++ Sbjct: 306 RSEKIRTYNF-PQDRCTDHRIGLTVHNLSKIMDGNLDEVIDALATREQ 352 >gi|254731050|ref|ZP_05189628.1| peptide chain release factor 1 [Brucella abortus bv. 4 str. 292] Length = 351 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 116/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R S + ++ + P + L E L + + I+E+ D + L + Sbjct: 2 DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 57 Query: 76 ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + ++ + + + Q L AD +A LE+ AG GG E+ Sbjct: 58 RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 117 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A ++ ++ E + +G+ G K + G + LK E GVHR+ Sbjct: 118 TLFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 177 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + I+IEI D RIDT RASGAGGQHVNTTDSAV Sbjct: 178 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 236 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG++V Q E+SQH+N+A+A +LRA+LY++E QK + ++ ++++G G Sbjct: 237 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 293 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V++GDLD+ + A ++ + Sbjct: 294 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQ 340 >gi|205355626|ref|ZP_03222396.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni CG8421] gi|205346403|gb|EDZ33036.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni CG8421] Length = 355 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 115/345 (33%), Positives = 180/345 (52%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R LN+ + ++ + L +E+++L+ + KE L + L Sbjct: 6 LDPFLKRFEELNSLLSSSDIINDISKMTTLSKEQKNLEPIVLKAKEYLKTLDNIEENKAL 65 Query: 76 ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + +E + E + L D + +LE+ AGAGG E+ + Sbjct: 66 LNDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGAGGDEASLFV 125 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L++ Y R+AE R +K E + +G G K +L+KG AY LK E G HR+ R+ Sbjct: 126 GDLVKAYARYAENRSYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHRVQRVP 185 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P D IEIEI+ +D ++D R+SG GGQ VNTTDSAVRITH Sbjct: 186 QTESQGRVHTSAITVAVMP-EVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVRITH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV Q +SQHKNK A +L+A+LY E+Q+ E +A E+ K+++G G + Sbjct: 245 IPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQESERLAKESEARKSQVGSGDRSER 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++ DG D+ ++ + + Sbjct: 303 IRTYNF-PQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQ 346 >gi|300087667|ref|YP_003758189.1| peptide chain release factor 2 [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527400|gb|ADJ25868.1| peptide chain release factor 2 [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 327 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 133/320 (41%), Positives = 195/320 (60%), Gaps = 5/320 (1%) Query: 34 HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93 W++ ++ +MR L + + ++ RL + L L E + Sbjct: 6 GFWEDSDNSQKVMRRLTGLKKTVEQWRSLERRLNELAELDALGDPEMAQD----VDAETE 61 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 + E++ +FE SGE D +A L +HAGAGG ESQDWA MLL MY +W E+R + E Sbjct: 62 AVSDELDRLEFELSYSGEYDERNALLSIHAGAGGVESQDWAEMLLAMYVKWGERRDYDVE 121 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 LE G+EAGIKS T +G AYG L+ E GVHRL+R+SP+DS+ RHTSF+ + V P Sbjct: 122 ILETSAGDEAGIKSVTAEFRGRYAYGNLRSEHGVHRLIRLSPFDSDHARHTSFALVEVMP 181 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 V++ E+EI+ D +++ +RASGAGGQ+V SAVR+TH P+G+VV Q ERSQH+N+ Sbjct: 182 EVEEDAEVEINPDDIKLEAFRASGAGGQNVQKVSSAVRLTHTPSGIVVTAQTERSQHQNR 241 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A ++LRA+L + ++ ++E + + WG QIRSYVL PY+MVKD RT +E Sbjct: 242 EVAMSLLRARLLQRKIAEQEAEKARLKGERISNEWGSQIRSYVLHPYKMVKDHRTGMETG 301 Query: 334 SPSDVL-DGDLDDFMKATLA 352 + VL +G+++ F++A L Sbjct: 302 NTQAVLEEGNIEMFIEAYLK 321 >gi|332520510|ref|ZP_08396972.1| peptide chain release factor 2 [Lacinutrix algicola 5H-3-7-4] gi|332043863|gb|EGI80058.1| peptide chain release factor 2 [Lacinutrix algicola 5H-3-7-4] Length = 317 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 140/307 (45%), Positives = 205/307 (66%), Gaps = 2/307 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ + + + D ++ E E + + + +E +F+ Sbjct: 1 MKTLRVKKKWVEDYNTANTLIEDLDVIYEFYKENEATLNDVTNR--FTKAQTAIEDLEFK 58 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++LS E DS A L++ AGAGGTES DWA ML+RMY +AEK FK + L + +G+ AGI Sbjct: 59 NMLSEEGDSLSAVLQITAGAGGTESCDWAQMLMRMYLMYAEKNNFKVKELNLQEGDVAGI 118 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ TL I+G A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDSIEIEI+ Sbjct: 119 KTVTLEIEGDYAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIEINP 178 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D I T R+SGAGGQ+VN ++ V++TH P+G+ + C + RSQH N+++A ML+++LY Sbjct: 179 ADIEITTARSSGAGGQNVNKVETKVQLTHKPSGIQISCSETRSQHDNRSRALQMLKSQLY 238 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+ELQK+ E++K +I WG QIR+YV+ PY++VKD+RT E + V+DGD+ Sbjct: 239 EIELQKQLSQREDIEAAKMKIEWGSQIRNYVMHPYKLVKDVRTGFESGNVDAVMDGDITP 298 Query: 346 FMKATLA 352 F+K+ L Sbjct: 299 FLKSYLM 305 >gi|270157830|ref|ZP_06186487.1| peptide chain release factor 1 [Legionella longbeachae D-4968] gi|269989855|gb|EEZ96109.1| peptide chain release factor 1 [Legionella longbeachae D-4968] Length = 351 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 113/338 (33%), Positives = 181/338 (53%), Gaps = 9/338 (2%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLEL 75 ++R + + + + + K L +E L+ + + +D + LL Sbjct: 1 MLERYQEVGRLLSEASVIADQNQFKTLSKEYAQLEPIATCYETYIEAKDNVSSLEELLAG 60 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +E +E + ++++ E Q+ + D + YLE+ AG GG E+ +A Sbjct: 61 EDKELAAMADEELASAKRQVEELDEQLQWHLIPKDPDDERNIYLEIRAGTGGDEAAIFAG 120 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY R+AE++ ++ E + GE G K I G Y LK E G HR+ R+ Sbjct: 121 DLYRMYIRYAEEQGWQQELISASHGEHGGYKEIITRISGNAVYSQLKFESGAHRVQRVPE 180 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS ++ + P VD+ +I+I+ D RIDTYR+SGAGGQHVN TDSA+RITHI Sbjct: 181 TESQGRVHTSACTVAILPEVDEIDDIQINPDDLRIDTYRSSGAGGQHVNKTDSAIRITHI 240 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTGVVV+CQ ERSQHKN+++A ++L+ +L + E K+ + ++ K+ +G G +I Sbjct: 241 PTGVVVECQDERSQHKNRSKAMSLLKTRLLDAEQSKQRKEQ--AQTRKSLVGTGDRSERI 298 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 R+Y P + D R N+ +DV++G L ++ Sbjct: 299 RTYNY-PQGRLTDHRINLTIYQLNDVMEGKLSLVVEPL 335 >gi|224538310|ref|ZP_03678849.1| hypothetical protein BACCELL_03201 [Bacteroides cellulosilyticus DSM 14838] gi|224520095|gb|EEF89200.1| hypothetical protein BACCELL_03201 [Bacteroides cellulosilyticus DSM 14838] Length = 370 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 98/354 (27%), Positives = 168/354 (47%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V R ++T DP + + L +E + L + + KE L E+ Sbjct: 11 LEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMEARKEYIQVLNGIEEAKEI 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + L + + + + DS +A LE+ G GG E+ Sbjct: 71 ISNEADPEMREMAREELDACQARQPELEEHIKLLLVPADPQDSKNAILEIRGGTGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYT++ E + ++ E +++G G K + G N YG LK E GVHR+ Sbjct: 131 IFAGDLFRMYTKYCETKGWRMEISSVNEGAAGGFKEVICSVTGDNVYGTLKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +S+ V P ++ + I+E + + DT+R+ GAGGQ+VN +S VR Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKVESGVR 249 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + ++ ++++C + R Q KNK +A + LR +Y+ E QK + +I K Sbjct: 250 LRYVWRNPNTGASEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYLD--DIASKRK 307 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 T + G + IR+Y P + D R N + S +DGD+ D + + + Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDGDIQDCIDHLIVAE 360 >gi|62290730|ref|YP_222523.1| peptide chain release factor 1 [Brucella abortus bv. 1 str. 9-941] gi|82700642|ref|YP_415216.1| peptide chain release factor 1 [Brucella melitensis biovar Abortus 2308] gi|189024940|ref|YP_001935708.1| peptide chain release factor 1 [Brucella abortus S19] gi|254694507|ref|ZP_05156335.1| peptide chain release factor 1 [Brucella abortus bv. 3 str. Tulya] gi|254696132|ref|ZP_05157960.1| peptide chain release factor 1 [Brucella abortus bv. 2 str. 86/8/59] gi|254707598|ref|ZP_05169426.1| peptide chain release factor 1 [Brucella pinnipedialis M163/99/10] gi|256258272|ref|ZP_05463808.1| peptide chain release factor 1 [Brucella abortus bv. 9 str. C68] gi|260545992|ref|ZP_05821732.1| peptide chain release factor 1 [Brucella abortus NCTC 8038] gi|260760500|ref|ZP_05872843.1| peptide chain release factor 1 [Brucella abortus bv. 2 str. 86/8/59] gi|261214824|ref|ZP_05929105.1| peptide chain release factor 1 [Brucella abortus bv. 3 str. Tulya] gi|261315085|ref|ZP_05954282.1| peptide chain release factor 1 [Brucella pinnipedialis M163/99/10] gi|75496230|sp|Q57B22|RF1_BRUAB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361513|sp|Q2YLN8|RF1_BRUA2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238689404|sp|B2S825|RF1_BRUA1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|62196862|gb|AAX75162.1| PrfA, peptide chain release factor 1 [Brucella abortus bv. 1 str. 9-941] gi|82616743|emb|CAJ11828.1| Class I peptide chain release factor domain:Peptide chain release factor 1:PCRF domain [Brucella melitensis biovar Abortus 2308] gi|189020512|gb|ACD73234.1| Class I peptide chain release factor domain protein [Brucella abortus S19] gi|260096099|gb|EEW79975.1| peptide chain release factor 1 [Brucella abortus NCTC 8038] gi|260670932|gb|EEX57753.1| peptide chain release factor 1 [Brucella abortus bv. 2 str. 86/8/59] gi|260916431|gb|EEX83292.1| peptide chain release factor 1 [Brucella abortus bv. 3 str. Tulya] gi|261304111|gb|EEY07608.1| peptide chain release factor 1 [Brucella pinnipedialis M163/99/10] Length = 359 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 116/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R S + ++ + P + L E L + + I+E+ D + L + Sbjct: 10 DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + ++ + + + Q L AD +A LE+ AG GG E+ Sbjct: 66 RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A ++ ++ E + +G+ G K + G + LK E GVHR+ Sbjct: 126 TLFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + I+IEI D RIDT RASGAGGQHVNTTDSAV Sbjct: 186 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG++V Q E+SQH+N+A+A +LRA+LY++E QK + ++ ++++G G Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V++GDLD+ + A ++ + Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQ 348 >gi|91226783|ref|ZP_01261436.1| peptide chain release factor 2 [Vibrio alginolyticus 12G01] gi|269964522|ref|ZP_06178762.1| peptide chain release factor 2 [Vibrio alginolyticus 40B] gi|91188914|gb|EAS75198.1| peptide chain release factor 2 [Vibrio alginolyticus 12G01] gi|269830759|gb|EEZ84978.1| peptide chain release factor 2 [Vibrio alginolyticus 40B] Length = 289 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 166/287 (57%), Positives = 212/287 (73%), Gaps = 1/287 (0%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 + D LLELA+EE+D E L ++ ++E +F + SG+ DS+D Y+++ AG+ Sbjct: 1 MEDVEGLLELAVEEEDQETFDEIEPELAELEEKLEKLEFRRMFSGDHDSSDCYIDLQAGS 60 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDW NMLLRMY RWAE + FK E +E+ +GE AG+KSAT+ I G AYGWL+ E Sbjct: 61 GGTEAQDWTNMLLRMYLRWAEAKGFKAEVIEVSEGEVAGLKSATVRISGEYAYGWLRTET 120 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVR SP+DS RRHTSF+S ++YP +D++I+I+I+ SD RID YRASGAGGQHVNT Sbjct: 121 GVHRLVRKSPFDSGGRRHTSFASAFIYPEIDENIDIDINPSDLRIDVYRASGAGGQHVNT 180 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T+SAVRITH+PT VVQCQ +RSQHKNK QA LRAKL+ELELQK+ E +K++ Sbjct: 181 TESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSD 240 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IGWG QIRSYVL +KDLRT IE + VLDGDLD F++A+L Sbjct: 241 IGWGSQIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDKFIEASLK 286 >gi|94984277|ref|YP_603641.1| peptide chain release factor 2 [Deinococcus geothermalis DSM 11300] gi|94554558|gb|ABF44472.1| peptide chain release factor 2 [Deinococcus geothermalis DSM 11300] Length = 380 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 138/326 (42%), Positives = 199/326 (61%), Gaps = 6/326 (1%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 G FD +RL+ L+ + DP LW N A+ + +E L + + +Q Sbjct: 28 GSTFDIPGKTRRLNELDRELSDPELWNNPSRARQVTQEAGSLRRIVDGYRTLQSDANSLN 87 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +LE+A +E+ ++ I+ V+ E+L + + A + V GAGGTE+ Sbjct: 88 EMLEMASDEERAL----LAEEQDTIQARVDELYRETLFTMKHADAPAIVRVKGGAGGTEA 143 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 QDWA ML RMY RWAE+R +K + L+ GE+AG +S +I+G A+G + E GVHRL Sbjct: 144 QDWAGMLARMYMRWAERRGYKVDVLDEQPGEQAGYQSIEFIIRGEKAFGMMAPEHGVHRL 203 Query: 191 VRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 VR+SP+D+N+RR TSF+S+ V P ++ I+I I +SD R+D YR+ GAGGQ VNTTDSA Sbjct: 204 VRVSPFDANNRRQTSFASVDVVPEVPEEQIDIVIPDSDVRVDVYRSQGAGGQGVNTTDSA 263 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+TH+PTG++V Q RSQ KN+ A+ +L+ +LY+LE++KREE + +I WG Sbjct: 264 VRVTHLPTGIIVAIQVTRSQIKNREMAFQILKQRLYDLEMRKREEEEAKARGEQKKIEWG 323 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSP 335 QIRSYVL VKD RT + K +P Sbjct: 324 SQIRSYVLDKQ-YVKDHRTGLMKHNP 348 >gi|308271577|emb|CBX28185.1| Peptide chain release factor 1 [uncultured Desulfobacterium sp.] Length = 363 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 107/347 (30%), Positives = 171/347 (49%), Gaps = 11/347 (3%) Query: 11 GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 G +F+ + A R L DP ++ + +RE L ++ + ++ Sbjct: 3 GIMFEKIEGAEVRFMELEMLLSDPDTIRDREAYQKYVREHSALSKIVAIYRSYKNINEQI 62 Query: 70 LILLELALEEDDCSI---LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 + L ED E + + + + + + E D + LE+ AG G Sbjct: 63 EESISLLKNEDPEIKELARDEIEELNLKKEDLEKQLRLLLIPKDEKDEKNVILEIRAGTG 122 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L RMY+R+AE R +K E L G+K LI+G AY K E G Sbjct: 123 GDEAALFATDLFRMYSRYAENRNWKVEVLTHSPTGVGGLKEIVALIQGKGAYSSFKYESG 182 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ ++ R HTS ++ V P + +E++I + ++D YR++G GGQ VNTT Sbjct: 183 THRVQRVPVTEAQGRIHTSAVTVAVLP-EAEEVELDIDPGEIKVDVYRSTGPGGQSVNTT 241 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PTG+VV CQ E+SQ KNK++A +LRA+L + ++ + K +I Sbjct: 242 DSAVRITHLPTGLVVTCQDEKSQFKNKSKAMKVLRARLLDNITMEQNQ--KRSAERKHQI 299 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G G +IR+Y P V D R + +L+G++D+ + Sbjct: 300 GSGDRSERIRTYNF-PQSRVTDHRIGLTLYKLEYILEGNIDEIISEL 345 >gi|163843895|ref|YP_001628299.1| peptide chain release factor 1 [Brucella suis ATCC 23445] gi|189039961|sp|B0CIC3|RF1_BRUSI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|163674618|gb|ABY38729.1| peptide chain release factor 1 [Brucella suis ATCC 23445] Length = 359 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 116/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R S + ++ + P + L E L + + I+E+ D + L + Sbjct: 10 DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + ++ + + + Q L AD +A LE+ AG GG E+ Sbjct: 66 RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A ++ ++ E + +G+ G K + G + LK E GVHR+ Sbjct: 126 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIITTVSGKGVFSKLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + I+IEI D RIDT RASGAGGQHVNTTDSAV Sbjct: 186 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG++V Q E+SQH+N+A+A +LRA+LY++E QK + ++ ++++G G Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V++GDLD+ + A ++ + Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQ 348 >gi|227892680|ref|ZP_04010485.1| peptide chain release factor RF1 [Lactobacillus ultunensis DSM 16047] gi|227865551|gb|EEJ72972.1| peptide chain release factor RF1 [Lactobacillus ultunensis DSM 16047] Length = 362 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 99/347 (28%), Positives = 169/347 (48%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V L DP + + + +E L + K+ + + ++ Sbjct: 8 LEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKQDKKELEDNKKI 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 + D +++ + I+ E+ + L D D +E+ AGG E+ Sbjct: 68 ISGDSDPDLVEMAKEENSEIEKEIPKLEEQIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY ++AE++ +K ++ E G K ++I G Y LK E G HR+ Sbjct: 128 LFAGDLLRMYEKYAERQGWKVSLIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ V P + ++I+I D R+D YR+SGAGGQH+N T SAVR Sbjct: 188 RIPVTESQGRVHTSTATVAVMP-EYEQVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q +RSQ +N+ +A +L++++Y+ + + A K +G G Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQ--AKYDAKRKNAVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + V++G+LD+ + A + + Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQ 350 >gi|29829454|ref|NP_824088.1| peptide chain release factor 1 [Streptomyces avermitilis MA-4680] gi|46576778|sp|Q82J70|RF1_STRAW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|29606562|dbj|BAC70623.1| putative peptide chain release factor 1 [Streptomyces avermitilis MA-4680] Length = 358 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 115/350 (32%), Positives = 174/350 (49%), Gaps = 16/350 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + + + L K DP + + A+ L + L ++ + + D Sbjct: 1 MFEAVEELIGEHADLEKKLADPSVHADQANARKLNKRYAELTPIVATYRSWKQTGDDIET 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E DD E D ++ + E + + +D D LE+ AGAGG ES Sbjct: 61 AKEF--VADDPDFAAEVKDLEKQREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG----------PNAYGWL 181 +A LLRMY R+AE+ +KTE ++ + E G K + +K + + Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVAVKTKGGQGATEPGQGVWARM 178 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHR+ R+ +S R HTS + + V P + +++EI +D RID YR+SG GGQ Sbjct: 179 KYEGGVHRVQRVPSTESQGRIHTSAAGVLVTP-EAEEVDVEIHANDLRIDVYRSSGPGGQ 237 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PTGVV CQ E+SQ +NK QA +LR++L ++ E A Sbjct: 238 SVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAEREAADARR 297 Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 S+ + +IR+Y P + D R + + VLDGDLD ++A Sbjct: 298 SQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLDAMIQAC 346 >gi|23502722|ref|NP_698849.1| peptide chain release factor 1 [Brucella suis 1330] gi|161619787|ref|YP_001593674.1| peptide chain release factor 1 [Brucella canis ATCC 23365] gi|254700516|ref|ZP_05162344.1| peptide chain release factor 1 [Brucella suis bv. 5 str. 513] gi|254704887|ref|ZP_05166715.1| peptide chain release factor 1 [Brucella suis bv. 3 str. 686] gi|254708865|ref|ZP_05170676.1| peptide chain release factor 1 [Brucella pinnipedialis B2/94] gi|254713712|ref|ZP_05175523.1| peptide chain release factor 1 [Brucella ceti M644/93/1] gi|254715938|ref|ZP_05177749.1| peptide chain release factor 1 [Brucella ceti M13/05/1] gi|256030391|ref|ZP_05444005.1| peptide chain release factor 1 [Brucella pinnipedialis M292/94/1] gi|256370269|ref|YP_003107780.1| peptide chain release factor 1 [Brucella microti CCM 4915] gi|260567639|ref|ZP_05838109.1| peptide chain release factor 1 [Brucella suis bv. 4 str. 40] gi|261217701|ref|ZP_05931982.1| peptide chain release factor 1 [Brucella ceti M13/05/1] gi|261316358|ref|ZP_05955555.1| peptide chain release factor 1 [Brucella pinnipedialis B2/94] gi|261321452|ref|ZP_05960649.1| peptide chain release factor 1 [Brucella ceti M644/93/1] gi|261751020|ref|ZP_05994729.1| peptide chain release factor 1 [Brucella suis bv. 5 str. 513] gi|261755581|ref|ZP_05999290.1| peptide chain release factor 1 [Brucella suis bv. 3 str. 686] gi|32171563|sp|Q8FYK3|RF1_BRUSU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189039960|sp|A9M8K5|RF1_BRUC2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|23348737|gb|AAN30764.1| peptide chain release factor 1 [Brucella suis 1330] gi|161336598|gb|ABX62903.1| peptide chain release factor 1 [Brucella canis ATCC 23365] gi|256000432|gb|ACU48831.1| peptide chain release factor 1 [Brucella microti CCM 4915] gi|260157157|gb|EEW92237.1| peptide chain release factor 1 [Brucella suis bv. 4 str. 40] gi|260922790|gb|EEX89358.1| peptide chain release factor 1 [Brucella ceti M13/05/1] gi|261294142|gb|EEX97638.1| peptide chain release factor 1 [Brucella ceti M644/93/1] gi|261295581|gb|EEX99077.1| peptide chain release factor 1 [Brucella pinnipedialis B2/94] gi|261740773|gb|EEY28699.1| peptide chain release factor 1 [Brucella suis bv. 5 str. 513] gi|261745334|gb|EEY33260.1| peptide chain release factor 1 [Brucella suis bv. 3 str. 686] Length = 359 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 116/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R S + ++ + P + L E L + + I+E+ D + L + Sbjct: 10 DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + ++ + + + Q L AD +A LE+ AG GG E+ Sbjct: 66 RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A ++ ++ E + +G+ G K + G + LK E GVHR+ Sbjct: 126 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + I+IEI D RIDT RASGAGGQHVNTTDSAV Sbjct: 186 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG++V Q E+SQH+N+A+A +LRA+LY++E QK + ++ ++++G G Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V++GDLD+ + A ++ + Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQ 348 >gi|225628073|ref|ZP_03786108.1| peptide chain release factor 1 [Brucella ceti str. Cudo] gi|261220926|ref|ZP_05935207.1| peptide chain release factor 1 [Brucella ceti B1/94] gi|225616898|gb|EEH13945.1| peptide chain release factor 1 [Brucella ceti str. Cudo] gi|260919510|gb|EEX86163.1| peptide chain release factor 1 [Brucella ceti B1/94] Length = 377 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 116/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R S + ++ + P + L E L + + I+E+ D + L + Sbjct: 28 DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 83 Query: 76 ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + ++ + + + Q L AD +A LE+ AG GG E+ Sbjct: 84 RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 143 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A ++ ++ E + +G+ G K + G + LK E GVHR+ Sbjct: 144 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSTLKFESGVHRV 203 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + I+IEI D RIDT RASGAGGQHVNTTDSAV Sbjct: 204 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 262 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG++V Q E+SQH+N+A+A +LRA+LY++E QK + ++ ++++G G Sbjct: 263 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 319 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V++GDLD+ + A ++ + Sbjct: 320 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQ 366 >gi|167752375|ref|ZP_02424502.1| hypothetical protein ALIPUT_00619 [Alistipes putredinis DSM 17216] gi|167660616|gb|EDS04746.1| hypothetical protein ALIPUT_00619 [Alistipes putredinis DSM 17216] Length = 361 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 104/346 (30%), Positives = 170/346 (49%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + + K DP + +V + +E + L+ I + + + + ++ Sbjct: 10 LDGLKLKYEEIGQKLTDPEVIADVKQFIQFNKEYRELEPIIEASERYRTAIANLAEAKDI 69 Query: 76 ALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 + D + + +I+ E + + D+ +A +E+ G GG E+ Sbjct: 70 LANDKDEEMREMARGEIAELEPKIETLEEEIKLLLIPKDPQDAKNAIVEIRGGTGGDEAA 129 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L+RMYT++ E + +K E +G G K + + G N YG LK E GVHR+ Sbjct: 130 IFAGDLMRMYTKYIESKGWKYEITSFSEGTAGGYKEVVMKVTGNNVYGTLKYESGVHRVQ 189 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +S+ V P ++ IS +D R D + ASG GGQ VNTT SA+R Sbjct: 190 RVPQTETQGRVHTSAASVAVLPEAEEFDVE-ISMNDIRKDIFCASGPGGQSVNTTYSAIR 248 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +THIPTG+VVQCQ ++SQ KN +A+ LR +++ LE K + I KT + G + Sbjct: 249 LTHIPTGIVVQCQDQKSQLKNFDKAFEELRTRVFNLEYSKYLDE--IASKRKTMVSTGDR 306 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P + D R N + S +DGD+ D + + + Sbjct: 307 SAKIRTYNY-PQGRITDHRINYTIYNLSAFMDGDIQDCIDHLIVAE 351 >gi|332287121|ref|YP_004422022.1| peptide chain release factor 2 [Chlamydophila psittaci 6BC] gi|325506910|gb|ADZ18548.1| peptide chain release factor 2 [Chlamydophila psittaci 6BC] gi|328914361|gb|AEB55194.1| peptide chain release factor 2 [Chlamydophila psittaci 6BC] Length = 294 Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats. Identities = 145/288 (50%), Positives = 195/288 (67%), Gaps = 1/288 (0%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 + + L D + ++ + + + + LLSGE D N +L ++AGA Sbjct: 1 MDNLAFFLNDGDVSADPELREDLEKEFAICENILSEWETQRLLSGEVDKNPCFLTINAGA 60 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTES DW ML RMY RWA + ++K E ++ +G+ AGIK T+ G AYG+ K E+ Sbjct: 61 GGTESCDWVEMLFRMYCRWAAQHQWKVEVIDRQEGDVAGIKHVTVKFSGDYAYGYAKAER 120 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVRISP+DSN++RHTSF+S+ VYP +DD IEI+I +D RIDT+R+SGAGGQHVN Sbjct: 121 GVHRLVRISPFDSNAKRHTSFASVDVYPEIDDEIEIDIRPNDLRIDTFRSSGAGGQHVNV 180 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITHIPTG++V CQ+ERSQ +N+ MLRA++Y+ LQ+R E I +K E Sbjct: 181 TDSAVRITHIPTGIMVSCQRERSQIQNRESCMKMLRARMYQQILQERLEKQLIDRKNKKE 240 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 I WG QIR+YV QPY +VKD+RT E + ++DG+ LDDF+KA LA Sbjct: 241 IAWGSQIRNYVFQPYTLVKDVRTGHETGNVQAMMDGELLDDFVKAYLA 288 >gi|294851112|ref|ZP_06791785.1| peptide chain release factor 1 [Brucella sp. NVSL 07-0026] gi|294819701|gb|EFG36700.1| peptide chain release factor 1 [Brucella sp. NVSL 07-0026] Length = 377 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 116/348 (33%), Positives = 187/348 (53%), Gaps = 18/348 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R S + ++ + P + L E L + + I+E+ D + L + Sbjct: 28 DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 83 Query: 76 ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + + ++ + + + Q L AD +A LE+ AG GG E+ Sbjct: 84 SDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 143 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A ++ ++ E + +G+ G K + G + LK E GVHR+ Sbjct: 144 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 203 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + I+IEI D RIDT RASGAGGQHVNTTDSAV Sbjct: 204 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 262 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG++V Q E+SQH+N+A+A +LRA+LY++E QK + ++ ++++G G Sbjct: 263 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 319 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V++GDLD+ + A ++ + Sbjct: 320 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQ 366 >gi|265993634|ref|ZP_06106191.1| peptide chain release factor 1 [Brucella melitensis bv. 3 str. Ether] gi|262764615|gb|EEZ10536.1| peptide chain release factor 1 [Brucella melitensis bv. 3 str. Ether] Length = 372 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 115/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R S + ++ + P + L E L + + I+E+ D + L + Sbjct: 23 DQLLKRFSMIESQMANNP----DSDSYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 78 Query: 76 ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + ++ + + + Q L AD +A LE+ AG GG E+ Sbjct: 79 RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 138 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A ++ ++ E + +G+ G K + G + LK E GVHR+ Sbjct: 139 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 198 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + I+IEI D RIDT RASGAGGQHVNTTDSAV Sbjct: 199 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 257 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG++V Q E+SQH+N+A+A +LRA+LY++E QK + ++ ++++G G Sbjct: 258 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 314 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V++G+LD+ + A ++ + Sbjct: 315 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGELDELVDALISDHQ 361 >gi|76810558|ref|YP_334108.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei 1710b] gi|121600418|ref|YP_993518.1| peptide chain release factor 2, programmed [Burkholderia mallei SAVP1] gi|124383704|ref|YP_001029053.1| peptide chain release factor 2 [Burkholderia mallei NCTC 10229] gi|126449475|ref|YP_001081026.1| peptide chain release factor 2, programmed [Burkholderia mallei NCTC 10247] gi|134278044|ref|ZP_01764759.1| peptide chain release factor 2 [Burkholderia pseudomallei 305] gi|167720343|ref|ZP_02403579.1| peptide chain release factor 2, programmed [Burkholderia pseudomallei DM98] gi|167739335|ref|ZP_02412109.1| peptide chain release factor 2, programmed [Burkholderia pseudomallei 14] gi|167816549|ref|ZP_02448229.1| peptide chain release factor 2, programmed [Burkholderia pseudomallei 91] gi|167824945|ref|ZP_02456416.1| peptide chain release factor 2, programmed [Burkholderia pseudomallei 9] gi|167846462|ref|ZP_02471970.1| peptide chain release factor 2, programmed [Burkholderia pseudomallei B7210] gi|167895040|ref|ZP_02482442.1| peptide chain release factor 2, programmed [Burkholderia pseudomallei 7894] gi|167903426|ref|ZP_02490631.1| peptide chain release factor 2, programmed [Burkholderia pseudomallei NCTC 13177] gi|167911676|ref|ZP_02498767.1| peptide chain release factor 2, programmed [Burkholderia pseudomallei 112] gi|167919676|ref|ZP_02506767.1| peptide chain release factor 2, programmed [Burkholderia pseudomallei BCC215] gi|254177740|ref|ZP_04884395.1| peptide chain release factor 2, programmed [Burkholderia mallei ATCC 10399] gi|254195760|ref|ZP_04902186.1| peptide chain release factor 2 [Burkholderia pseudomallei S13] gi|254357976|ref|ZP_04974249.1| peptide chain release factor 2 [Burkholderia mallei 2002721280] gi|76580011|gb|ABA49486.1| peptide chain release factor 2, programmed frameshift [Burkholderia pseudomallei 1710b] gi|121229228|gb|ABM51746.1| peptide chain release factor 2, programmed [Burkholderia mallei SAVP1] gi|134251694|gb|EBA51773.1| peptide chain release factor 2 [Burkholderia pseudomallei 305] gi|148027103|gb|EDK85124.1| peptide chain release factor 2 [Burkholderia mallei 2002721280] gi|160698779|gb|EDP88749.1| peptide chain release factor 2, programmed [Burkholderia mallei ATCC 10399] gi|169652505|gb|EDS85198.1| peptide chain release factor 2 [Burkholderia pseudomallei S13] Length = 248 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 149/247 (60%), Positives = 196/247 (79%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE DG+ AGIK Sbjct: 1 MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 +AT+ + G AYG+L+ E G+HRLVR SP+DS+ RHTSFSS++VYP +DDSIE+EI+ + Sbjct: 61 NATIKVSGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A ML+++L+E Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 EL+KR+ + ESSKT++GWG QIRSYVL VKDLRTN+E ++ VLDGDLDDF Sbjct: 181 AELRKRQAEQDKLESSKTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTKAVLDGDLDDF 239 Query: 347 MKATLAI 353 + A+L Sbjct: 240 ISASLKQ 246 >gi|149925825|ref|ZP_01914089.1| peptide chain release factor 1 [Limnobacter sp. MED105] gi|149825942|gb|EDM85150.1| peptide chain release factor 1 [Limnobacter sp. MED105] Length = 360 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 120/341 (35%), Positives = 174/341 (51%), Gaps = 7/341 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +RL+ L + ++ + K + RER L A E D E Sbjct: 9 LTRLAERLADLEEFLSSQNAANDMAQFKAITRERSELLPATERFAEYLSIEADLNTAQEW 68 Query: 76 ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + +E + + Q L D +A LE+ AG GG ES +A Sbjct: 69 LSDPDMRDMAREEIAQNEAKLAQLEADLQRLLLPKDPNDHRNAMLEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMYTR+AE++ ++ E + + E G K + + G + Y LK E G HR+ R+ Sbjct: 129 GDLFRMYTRYAERQGWQIEVMSASESELGGYKEVIIRLAGDHVYKHLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V D++ IEI+ +D RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 189 ATESQGRIHTSACTVAVMAEPDEAEVIEINPADLRIDTYRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV+CQ ERSQHKNKA+A +L +L + ++R+ A ++ +G G + Sbjct: 249 LPTGLVVECQDERSQHKNKAKAMKVLNVRLQDKIDRERQ--AAEASERRSLVGSGDRSER 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IR+Y P + D R N+ ++DGDL D M A Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYKLDYIMDGDLTDLMNGLTA 346 >gi|99080782|ref|YP_612936.1| peptide chain release factor 1 [Ruegeria sp. TM1040] gi|119361610|sp|Q1GI42|RF1_SILST RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|99037062|gb|ABF63674.1| bacterial peptide chain release factor 1 (bRF-1) [Ruegeria sp. TM1040] Length = 350 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 117/344 (34%), Positives = 174/344 (50%), Gaps = 13/344 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +QR +L D L +E L + I Q L D E+ Sbjct: 7 LQQILQRYQYLEAAMADGAGGD----IAKLAKEYSDLRPVVEQISAYQQLLSDLAEAEEM 62 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D ++ +E L+ Q L EADS A LE+ G GG E+ +A Sbjct: 63 LADPDMKALAEEEIPTLKAALPQAEHALQLALLPKDEADSRAAILEIRPGTGGDEAALFA 122 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE + +K + +E E G+K I G + LK E GVHR+ R+ Sbjct: 123 ADLYRMYSRYAETQGWKVDVIEEQASELGGLKELVARINGDGVFARLKYESGVHRVQRVP 182 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P + ++I+I +D RIDT RASGAGGQHVNTTDSAVRITH Sbjct: 183 VTESGGRIHTSAATVAVLP-EAEDVDIKIDANDLRIDTMRASGAGGQHVNTTDSAVRITH 241 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV E+SQH+N+ A +L+ +LY+LE Q+ + +++G G + Sbjct: 242 LPTGLVVTSS-EKSQHRNREIAMQVLKTRLYDLERQRIDTER--SADRASQVGSGDRSER 298 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++ GDLD+ + A ++ + Sbjct: 299 IRTYNF-PQGRMSDHRINLTLYKLDQIMGGDLDEIIDALISEHQ 341 >gi|152989856|ref|YP_001355578.1| peptide chain release factor 1 [Nitratiruptor sp. SB155-2] gi|166223578|sp|A6Q162|RF1_NITSB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|151421717|dbj|BAF69221.1| peptide chain release factor 1 [Nitratiruptor sp. SB155-2] Length = 354 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 113/340 (33%), Positives = 185/340 (54%), Gaps = 8/340 (2%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 +QR + +N P + Q++ + L +E+ ++ + KE + L L +E Sbjct: 10 IQRYNEINELLSSPEITQDIKKMTALSKEQSEIEPIVEKAKEYMNILEAIEENRSLIEDE 69 Query: 80 DDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 + + +E L+ K + E + + D D YLE+ AG GG E+ +A+ L Sbjct: 70 ELGELAKEELKELEPKKEQLEEEIKVLLISKDPNDEKDIYLEIRAGTGGEEAALFASDLF 129 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 + Y R+AEK+ ++ E + + + G K IKG Y LK E G HR+ R+ +S Sbjct: 130 KAYARYAEKKGWRVEIVSSSESDSGGYKEIIAKIKGQGVYSRLKYEAGTHRVQRVPETES 189 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R HTS ++ + P D +++EI+ +D +ID YR+SG GGQ VNTTDSAVRITHIPTG Sbjct: 190 QGRIHTSAVTVAIMP-EVDDVDVEINPNDLKIDVYRSSGHGGQSVNTTDSAVRITHIPTG 248 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315 +VV Q E+SQHKNK +A +L+A+++E +++++E + + K ++G G +IR+Y Sbjct: 249 IVVAMQDEKSQHKNKEKALKILKARIFEKRMREQQE--ALAKDRKEQVGSGDRSERIRTY 306 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 P V D R + +V+ GDLD ++ +A + Sbjct: 307 NF-PQNRVTDHRIGLTLYKLEEVMQGDLDQIIEPLIAHYQ 345 >gi|326803667|ref|YP_004321485.1| peptide chain release factor 1 [Aerococcus urinae ACS-120-V-Col10a] gi|326651316|gb|AEA01499.1| peptide chain release factor 1 [Aerococcus urinae ACS-120-V-Col10a] Length = 360 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 111/347 (31%), Positives = 170/347 (48%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + R L DP + + + L +E L + K ++ + EL Sbjct: 6 LDTFIARYQELAELLSDPDVINDHKRFRDLAKEEADLRPKVGTFKHYKEVVSGIEDTEEL 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQ 131 E + +L+ L ++K E + + E L S D + +E+ AGG E+Q Sbjct: 66 IKETSEEDMLELAKSELDQLKAERDDLEEEIKVLMLPSDPNDDKNIIMEIRGAAGGDEAQ 125 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MY+R+AE + + E + + G K L I G Y LK E G HR+ Sbjct: 126 LFAADLFEMYSRYAESQGWHVEVADASSNDLGGYKEIILQISGDKVYSKLKYESGAHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P ++D EI E D R D YRASGAGGQHVN T SAVR Sbjct: 186 RVPKTESQGRVHTSTATVGVMPELEDLD-FEIDEKDIRTDIYRASGAGGQHVNKTSSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTG+ V Q +RSQ +N+ +A +LR+++Y+ + +E E K +G G Sbjct: 245 MTHIPTGIQVAMQDQRSQQQNREKAMLILRSRVYDYY--QSQEQDEYDEKRKNLVGTGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ ++ G+LD+ + A + + Sbjct: 303 SERIRTYNY-PQNRVTDHRINLTLQKLDRIMGGELDEIIDALILADQ 348 >gi|311747486|ref|ZP_07721271.1| peptide chain release factor 2 [Algoriphagus sp. PR1] gi|126574844|gb|EAZ79215.1| peptide chain release factor 2 [Algoriphagus sp. PR1] Length = 315 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 140/309 (45%), Positives = 199/309 (64%), Gaps = 2/309 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M++ Q + + ++ + D +L E ++ K VE + + Sbjct: 1 MKQIQARKTWTTSYENLEKAIEDLEVLYEFYSADEVSEEEMSREFEKA--KSTVEELELK 58 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LS E D +A LE++ GAGGTES DWA++L+RMY W EK +K +++ G+ AGI Sbjct: 59 KMLSSEEDQLNAVLEINPGAGGTESNDWASILMRMYIMWGEKNGYKVREVDVQQGDVAGI 118 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KS TL +GP AYG+LK E GVHRLVRISP+DS RRHTSF+S++ YP VDDSIEI+I+ Sbjct: 119 KSCTLEFEGPLAYGFLKSETGVHRLVRISPFDSGGRRHTSFASVYAYPEVDDSIEIDINP 178 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D + T R+ GAGGQ+VN ++ V++TH PTG+VV CQ ERSQ N+ +A ML+++L+ Sbjct: 179 ADIELHTSRSGGAGGQNVNKVETKVQLTHKPTGIVVVCQIERSQLANREKAMQMLKSRLF 238 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 +LE++KR ESSK + +G QIR+YVL PY++VKD RT E + VLDG L++ Sbjct: 239 QLEVEKRNAEIAKIESSKLRVDFGSQIRNYVLHPYKLVKDARTGHETSDTQHVLDGGLNE 298 Query: 346 FMKATLAIK 354 FMKA L + Sbjct: 299 FMKAYLLAQ 307 >gi|189467991|ref|ZP_03016776.1| hypothetical protein BACINT_04385 [Bacteroides intestinalis DSM 17393] gi|189436255|gb|EDV05240.1| hypothetical protein BACINT_04385 [Bacteroides intestinalis DSM 17393] Length = 370 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 98/354 (27%), Positives = 168/354 (47%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V R ++T DP + + L +E + L + + KE L E+ Sbjct: 11 LEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMEARKEYIQVLNGIEEAKEI 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + L + + + + DS +A LE+ G GG E+ Sbjct: 71 ITNEADPEMREMAREELDACQARQPELEEHIKLLLVPADPQDSKNAILEIRGGTGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYT++ E + +K E +++G G K + G N YG LK E GVHR+ Sbjct: 131 IFAGDLFRMYTKFCETKGWKMEISSVNEGAAGGFKEIICSVTGDNVYGTLKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +S+ V P ++ + I+E + + DT+R+ GAGGQ+VN +S VR Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKVESGVR 249 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + ++ ++++C + R Q KNK +A + LR +Y+ E QK + +I K Sbjct: 250 LRYVWKNPNTGVSEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYLD--DIASKRK 307 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 T + G + IR+Y P + D R N + + +DGD+ D + + + Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360 >gi|197120070|ref|YP_002140497.1| peptide chain release factor 1 [Geobacter bemidjiensis Bem] gi|197089430|gb|ACH40701.1| peptide chain release factor 1 [Geobacter bemidjiensis Bem] Length = 359 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 106/328 (32%), Positives = 172/328 (52%), Gaps = 10/328 (3%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LILLELALEEDDCSIL 85 DP + N E + L +E L ++ +E + L D LL+ +E Sbjct: 20 LLSDPEVLGNQTEFRKLSKEHSGLAELVAAYREYKKILSDIDDNKELLKEPDQEMREMAQ 79 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 E R ++ + L D + LE+ AG GG ES +A L RMY+R+A Sbjct: 80 AELLSLEARREVLEGEIKLLLLPKDPNDDKNVVLEIRAGTGGDESALFAGDLFRMYSRFA 139 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E +++ E + + E+ G K L++G + LK E G HR+ R+ ++ R HTS Sbjct: 140 ETNRWRVEIISASESEKGGFKEVIALVEGTGVFAKLKYESGTHRVQRVPETEAQGRIHTS 199 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 ++ V P + ++I+I+ +D +ID YR+SGAGGQHVNTTDSAVRITH+PTG VV CQ+ Sbjct: 200 ACTVAVMP-EAEDVDIDINPADLKIDVYRSSGAGGQHVNTTDSAVRITHLPTGTVVACQE 258 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQM 322 ERSQ KN+A+A +L++++ + + ++ A + K+++G G +IR+Y P Sbjct: 259 ERSQIKNRAKAMKVLKSRILDNIVMEQN--AKLAADRKSQVGSGDRSERIRTYNF-PQGR 315 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 + D R + ++ GD+ + + Sbjct: 316 MTDHRIGLTLYRLDAIMAGDIAEIADSL 343 >gi|213964464|ref|ZP_03392664.1| peptide chain release factor 1 [Corynebacterium amycolatum SK46] gi|213952657|gb|EEB64039.1| peptide chain release factor 1 [Corynebacterium amycolatum SK46] Length = 357 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 116/348 (33%), Positives = 178/348 (51%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ + L + DP L + A+ + + L I K++ + D E+ Sbjct: 8 VDDILSEYHGLEAQLADPELHNDPKAARKVGKRFNELQPVIQTHKKLTEVQDDLEAAREM 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D E + E DS+D +E+ +GAGG E+ +A Sbjct: 68 --AYEDSEFAAEAERLAAEAEELEEKLADLLAPRDPHDSDDIVMELKSGAGGEEAALFAG 125 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190 L RMY R+AEK F TE L + + + G+K T+ I+ A+ K E GVHR+ Sbjct: 126 ELARMYQRYAEKHGFTTEILGLSESDLGGVKDMTMSIRAKTPSRDGAWSVFKFEGGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R TS + + VYP D+ +I+I E D R+D YR+SG GGQ VNTTDSAV Sbjct: 186 QRVPVTESQGRIQTSAAGVLVYPEPDEVEDIQIDEKDLRVDVYRSSGKGGQGVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307 R+TH+PTG+VV CQ+ERSQ +NKA+A +L A+L +++ ++ E A + K+++ Sbjct: 246 RLTHLPTGLVVTCQKERSQIQNKARAMQVLAARLQQMKEEEIAEAA--SDQRKSQVRNMD 303 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + + VL GD+DD +KA ++ Sbjct: 304 RSERIRTYNF-PENRVSDHRIGYKAHNLDSVLGGDMDDLLKALHDAER 350 >gi|172058704|ref|YP_001815164.1| peptide chain release factor 1 [Exiguobacterium sibiricum 255-15] gi|229576657|sp|B1YEH9|RF1_EXIS2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|171991225|gb|ACB62147.1| peptide chain release factor 1 [Exiguobacterium sibiricum 255-15] Length = 352 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 104/348 (29%), Positives = 175/348 (50%), Gaps = 9/348 (2%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D R LN DP + ++ + + + +E+ L + + +D++ Sbjct: 1 MLDRLSALEDRYEKLNDLLADPAIIKDTNQLREVSKEQSQLAPTVEVYRVYRDKMEAYQE 60 Query: 72 LLELALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + + +E + IK + L D + +E+ AGG E+ Sbjct: 61 ARHMLTDPEMRDLAKEEVAVLEPEIKDLETKLKALLLPKDPNDDKNVIVEIRGAAGGDEA 120 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L +MY+++AEK+ +K E ++ E G K ++KG AY LK E G HR+ Sbjct: 121 ALFAGDLFKMYSKFAEKQNWKIEIIDASYTELGGYKEIIFIVKGSGAYSKLKYENGAHRV 180 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E+EI + D R+DT+ +SG GGQ VNTT SAV Sbjct: 181 QRVPSTESGGRIHTSTATVAVLP-EAEDVEVEIHDKDVRVDTFTSSGPGGQSVNTTQSAV 239 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+TH+PTG+V CQ E+SQ KNK +A +LRA++Y+ +RE+ A E K+ +G G Sbjct: 240 RVTHVPTGIVASCQDEKSQIKNKEKAMKVLRARVYDKI--QREQQAEYDEKRKSAVGTGD 297 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y V D R + +L G++D+ + + + Sbjct: 298 RSERIRTYNFA-QNRVTDHRIGLTIQKLDRILQGEMDEVIDTLVMEYQ 344 >gi|297181249|gb|ADI17443.1| protein chain release factor a [uncultured Rhodospirillales bacterium HF0070_31K06] Length = 357 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 127/349 (36%), Positives = 189/349 (54%), Gaps = 15/349 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ + R + L L + + +E L + +E++ + L EL Sbjct: 7 LDSVISRHAELAALMASGDL--DAGQYADYSKEYAELSPVVEKAQELKSLREELGGLEEL 64 Query: 76 ALEEDDCSILQE-TSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130 + + S ++E Q ++ +V + L AD A LE+ AG GG E+ Sbjct: 65 LADPETDSEMKELAEAERQELRDQVPDIEESLRILLLPKDAADEKSAILEIRAGTGGDEA 124 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A+ L+RMY R+AE ++TE L++ + E G+K A L I G + LK E GVHR+ Sbjct: 125 ALFASDLMRMYQRYAEMHGWRTEFLDLSETELGGVKEAALSIAGRGVFARLKFESGVHRV 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ DS R HTS +++ V P + ++I+I SD R+DTYRASGAGGQHVN TDSA+ Sbjct: 185 QRVPTTDSGGRIHTSAATVAVLP-EAEEVDIQIDTSDLRVDTYRASGAGGQHVNKTDSAI 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+VVQCQ E+SQHKN+A+A +LRA+LY+ E Q + KT++G G Sbjct: 244 RITHLPTGIVVQCQDEKSQHKNRAKAMKVLRARLYDHERQTLDAER--AADRKTQVGSGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 +IR+Y P V D R N+ +L GD LD+ + +A + Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLHKLDRILAGDELDEVVDLLIAEDQ 349 >gi|237816235|ref|ZP_04595228.1| peptide chain release factor 1 [Brucella abortus str. 2308 A] gi|260758776|ref|ZP_05871124.1| peptide chain release factor 1 [Brucella abortus bv. 4 str. 292] gi|260884577|ref|ZP_05896191.1| peptide chain release factor 1 [Brucella abortus bv. 9 str. C68] gi|297247116|ref|ZP_06930834.1| peptide chain release factor 1 [Brucella abortus bv. 5 str. B3196] gi|237788302|gb|EEP62517.1| peptide chain release factor 1 [Brucella abortus str. 2308 A] gi|260669094|gb|EEX56034.1| peptide chain release factor 1 [Brucella abortus bv. 4 str. 292] gi|260874105|gb|EEX81174.1| peptide chain release factor 1 [Brucella abortus bv. 9 str. C68] gi|297174285|gb|EFH33632.1| peptide chain release factor 1 [Brucella abortus bv. 5 str. B3196] Length = 377 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 116/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R S + ++ + P + L E L + + I+E+ D + L + Sbjct: 28 DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 83 Query: 76 ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + ++ + + + Q L AD +A LE+ AG GG E+ Sbjct: 84 RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 143 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A ++ ++ E + +G+ G K + G + LK E GVHR+ Sbjct: 144 TLFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 203 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + I+IEI D RIDT RASGAGGQHVNTTDSAV Sbjct: 204 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 262 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG++V Q E+SQH+N+A+A +LRA+LY++E QK + ++ ++++G G Sbjct: 263 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 319 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V++GDLD+ + A ++ + Sbjct: 320 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQ 366 >gi|254457086|ref|ZP_05070514.1| peptide chain release factor 1 [Campylobacterales bacterium GD 1] gi|207085878|gb|EDZ63162.1| peptide chain release factor 1 [Campylobacterales bacterium GD 1] Length = 355 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 110/345 (31%), Positives = 179/345 (51%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + R + L+ P + ++ L +E+ L + KE + + E+ Sbjct: 6 LNPFINRYNELSELLSSPDITSDIKRMTALSKEQSSLLPIVEKAKEYKSIIKQIAETKEM 65 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E L+ L E + L + D + +E+ AGAGG E+ + Sbjct: 66 LGDPEMIDMAKEELKELEPQIPLIEESIKLLLLPKDQNDDRNIIVELRAGAGGDEAAIFV 125 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L YTR+AE + +K E L + G K LIKG Y LK E G+HR+ R+ Sbjct: 126 GDLFDAYTRYAEVKGWKVELLSTSPSDAGGFKEVIALIKGDQVYSRLKYEGGIHRVQRVP 185 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P D +E+ I+E+D +ID R+SG GGQ VNTTDSAVRITH Sbjct: 186 ETESQGRVHTSAITVAVMP-EVDDVEVVINENDLKIDVMRSSGCGGQSVNTTDSAVRITH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311 +PTG+VV Q ++SQHKNK +A +L+A+LY+LE+Q E + E+ ++G G + Sbjct: 245 LPTGLVVTNQDQKSQHKNKEKAMKVLKARLYDLEMQ--EAQSKDSEARLAQVGSGDRSGR 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 IR+Y P + D R + +++++G LD+ ++ + + Sbjct: 303 IRTYNY-PQNRMSDHRITLTLYRLNEIMNGGLLDEVIEPLITDHQ 346 >gi|239995055|ref|ZP_04715579.1| Protein chain release factor B, RF-2 [Alteromonas macleodii ATCC 27126] Length = 248 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 158/246 (64%), Positives = 190/246 (77%), Gaps = 1/246 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG D ND Y+++ +G+GGTE+QDWANMLLRMY RW E FKTE +E+ +GE AGIK Sbjct: 1 MFSGPNDENDCYIDIQSGSGGTEAQDWANMLLRMYLRWGEAHGFKTELIEVSEGEVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SATL ++G A+GWL+ E GVHRLVR SP+DS +RRHTSFSS +VYP +DD I+IEI+ S Sbjct: 61 SATLRVQGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSSAFVYPEIDDDIDIEINPS 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQHVN TDSAVRITH PTG+VVQCQ +RSQHKNK QA L+AKLYE Sbjct: 121 DLRIDTYRASGAGGQHVNRTDSAVRITHEPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ELQK+ E SK++IGWG QIRSYVL +KDLRT +E + VLDGDLD F Sbjct: 181 FELQKQNAEKQAMEDSKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKF 239 Query: 347 MKATLA 352 ++A+L Sbjct: 240 IEASLK 245 >gi|148558947|ref|YP_001259697.1| peptide chain release factor 1 [Brucella ovis ATCC 25840] gi|265987430|ref|ZP_06099987.1| peptide chain release factor 1 [Brucella pinnipedialis M292/94/1] gi|148370204|gb|ABQ60183.1| peptide chain release factor 1 [Brucella ovis ATCC 25840] gi|264659627|gb|EEZ29888.1| peptide chain release factor 1 [Brucella pinnipedialis M292/94/1] Length = 377 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 116/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R S + ++ + P + L E L + + I+E+ D + L + Sbjct: 28 DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 83 Query: 76 ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + ++ + + + Q L AD +A LE+ AG GG E+ Sbjct: 84 RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 143 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A ++ ++ E + +G+ G K + G + LK E GVHR+ Sbjct: 144 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 203 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + I+IEI D RIDT RASGAGGQHVNTTDSAV Sbjct: 204 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 262 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG++V Q E+SQH+N+A+A +LRA+LY++E QK + ++ ++++G G Sbjct: 263 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 319 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V++GDLD+ + A ++ + Sbjct: 320 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQ 366 >gi|320160374|ref|YP_004173598.1| peptide chain release factor 1 [Anaerolinea thermophila UNI-1] gi|319994227|dbj|BAJ62998.1| peptide chain release factor 1 [Anaerolinea thermophila UNI-1] Length = 357 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 113/339 (33%), Positives = 175/339 (51%), Gaps = 12/339 (3%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 R LN E + + L +ER L+ + +E + L L Sbjct: 7 AIESRFEELNRLLE--ENAGDYQKVIELSKERADLEPIVEKAQEYRTVLKQIEEARTLLE 64 Query: 78 EEDDCSIL---QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 D+ + R ++ + + + D + +E+ AG GG E+ +A Sbjct: 65 SGDEELRELAEADLETLEPRQEVLEKELKTLLIPKDPRDERNVIVEIRAGTGGEEAALFA 124 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AEKR + E + ++ G K ++KG AY LK E GVHR+ RI Sbjct: 125 GDLFRMYSRYAEKRGWSVEIISQNETGIGGYKEIIFMVKGKGAYSRLKYESGVHRVQRIP 184 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S+ R HTS +++ V D ++I I +SD I+ YR++GAGGQ+V +AVRITH Sbjct: 185 VTESSGRIHTSTATVAVLA-EVDEVDINIPDSDLEIEVYRSAGAGGQNVQKNSTAVRITH 243 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 +PTG+VV CQ ERSQ +NK +A ++LRAKLYE+E QKR++ + + ++++G G + Sbjct: 244 LPTGIVVACQDERSQLQNKLRAMSILRAKLYEIEEQKRQQELD--ATRRSQVGTGERAEK 301 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P V D R I + VLDG++D F+ Sbjct: 302 IRTYNF-PQSRVTDHRIGISSYNLPAVLDGEIDLFIDEL 339 >gi|227431146|ref|ZP_03913202.1| peptide chain release factor RF1 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227353098|gb|EEJ43268.1| peptide chain release factor RF1 [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 356 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 95/344 (27%), Positives = 169/344 (49%), Gaps = 8/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + LN + DP + N L +E + + + + D + EL Sbjct: 8 LQTVIDHYDELNEQLADPEVMNNGQHYMKLSKEAGEIRQTVEVYTRYKQVIQDIQVAEEL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E L+ K ++E + + L D + +E+ AGG ES +A Sbjct: 68 LGDAEMAPLAKEDLSALKPEKEQLEEQLKILMLPKDPNDDKNIIMEIRGAAGGDESSLFA 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LL MY R+AE++ + ++ E G K ++I G N Y LK E G HR+ R+ Sbjct: 128 ADLLDMYRRYAERQNWSMSIIDQSTTEVGGYKEVAIMITGGNVYSKLKFESGAHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS +++ V P ++ I+ E++ESD + +R+ GAGGQ+VN +AVR+ H Sbjct: 188 ATETQGRVHTSTATVGVMPEFEE-IDFELNESDLEEEFFRSGGAGGQNVNKVSTAVRLIH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 PTG++V+ Q+ER+Q KN+ +A +L +++Y+ Q+ E K+ +G G + Sbjct: 247 KPTGIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNESE--YAAQRKSAVGTGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R + +++G+L + + A + + Sbjct: 305 IRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELGEVIDALVIADQ 347 >gi|84516322|ref|ZP_01003682.1| peptide chain release factor 1 [Loktanella vestfoldensis SKA53] gi|84510018|gb|EAQ06475.1| peptide chain release factor 1 [Loktanella vestfoldensis SKA53] Length = 351 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 115/339 (33%), Positives = 171/339 (50%), Gaps = 12/339 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + R FL K D ++ L RE L + + +D L + L Sbjct: 7 IEQIIDRFRFLEAKMSDAAHGGDIA---ALGREYAELRPVVDTVTAYKDLLAQMIDTQAL 63 Query: 76 ALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + ++ ++ L+ Q L AD+ A LE+ G GG E+ +A Sbjct: 64 LKDPEMRALAEDELPELKAALAASEHAVQLALLPKDAADARPALLEIRPGTGGDEASLFA 123 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE ++ E LE E GIK + G + LK E GVHR+ R+ Sbjct: 124 GDLLRMYQRYAENMGWRFEILEQSQTELGGIKEVVARVAGEGVFARLKYESGVHRVQRVP 183 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P ++I+I+ +D RIDT RASG+GGQHVNTTDSAVRI H Sbjct: 184 ETESGGRIHTSAATVAVLP-EAQDVDIQINPNDLRIDTMRASGSGGQHVNTTDSAVRILH 242 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG++V E+SQH+N+ A +L+ +L++LE Q+ + K ++G G + Sbjct: 243 IPTGLIV-VSAEKSQHRNREIAMQVLKTRLFDLERQRIDGER--SADRKAQVGSGDRSER 299 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P + D R N+ S V+ GDLD + A Sbjct: 300 IRTYNF-PQGRLTDHRINLTLYSLGQVMAGDLDTIIDAL 337 >gi|171779352|ref|ZP_02920316.1| hypothetical protein STRINF_01197 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281969|gb|EDT47400.1| hypothetical protein STRINF_01197 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 359 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 98/348 (28%), Positives = 164/348 (47%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E ++ +E + L + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMALSKEEASTRETVTVYREYKQILQNIEDAEEM 66 Query: 76 ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + L+E + + + E + L D + LE+ AGG E+ Sbjct: 67 IKDAGGDPELEEMAKEELKDSKAAKEDYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL+MY ++AE + +K + +E GIK +++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLQMYQKYAESQGWKFDVMEASYNGVGGIKEVIVMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E EI D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+ HIPTG+ V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ +G G Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILFDQ 350 >gi|294785988|ref|ZP_06751275.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_27] gi|294486325|gb|EFG33688.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_27] Length = 308 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 147/303 (48%), Positives = 208/303 (68%), Gaps = 1/303 (0%) Query: 53 DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112 N +S +++ + D +L++ + + + +K ++E + LL GE Sbjct: 5 KNIVSRYEKLATEIDDEEVLIDFVESGEASFENE-LQTKHKILKSDIEEFEINLLLDGEY 63 Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D N+A + +H+GAGGTE+ DWA+ML RMY RW + +K L+ +G+ G+KS T L+ Sbjct: 64 DMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKGYKVSELDFMEGDSVGVKSVTFLV 123 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G NAYG+LK E+GVHRLVRISP+D+N +RHTSF+S+ V P VD+++E+EI+ +D RIDT Sbjct: 124 EGINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDENVEVEINPTDIRIDT 183 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQHVN TDSAVRITH P+G+VV CQ+ERSQ N+ A ML++KL ELE++K+ Sbjct: 184 YRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQLSNRETAMKMLKSKLLELEIKKK 243 Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 EE + +++IGWG QIRSYV QPY +VKD RTN E + V+DG +DDF+ + L Sbjct: 244 EEEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDHRTNTEIGNVKAVMDGSIDDFINSYLR 303 Query: 353 IKK 355 K Sbjct: 304 WIK 306 >gi|309390220|gb|ADO78100.1| bacterial peptide chain release factor 1 (bRF-1) [Halanaerobium praevalens DSM 2228] Length = 360 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 117/353 (33%), Positives = 189/353 (53%), Gaps = 18/353 (5%) Query: 13 LFDWDNAVQRLSFL-------NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 +FD ++ +L L N K DP + + + + L+++ L + KE + Sbjct: 1 MFDLNDLESKLDKLVAKYKQMNKKLSDPEVINDSDKYQKLLKKHAKLKKIVDKYKEYKAA 60 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEV 121 E+ +DD + + + +K + E Q L D + +E+ Sbjct: 61 KEGIAEAEEMMELDDDPEMQALFEEEIAELKPKKEKLQEQLPIMLLPDDPNDEKNVIVEI 120 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG E+ +A L RMYTR+AE + +K + + ++ G K I+G + + +L Sbjct: 121 RAGAGGDEAALFAADLYRMYTRYAEGKGWKVDLMSANESGTGGFKEIIFTIEGTDIFKYL 180 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHR+ R+ +S+ R HTS +++ V P + +++EI +D IDT+R+SG GGQ Sbjct: 181 KYESGVHRVQRVPSTESSGRIHTSTATVAVLP-EAEEVDVEIETNDLTIDTFRSSGPGGQ 239 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSA+RITH PTG+ V CQ E+SQHKNKA+A +LRA+L E + +E+ E+ Sbjct: 240 SVNTTDSAIRITHEPTGLTVSCQDEKSQHKNKAKAMKILRARLQEKKE--QEKQKERSEA 297 Query: 302 SKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K+++G G +IR+Y P V D R N+ +LDG+L+ ++A + Sbjct: 298 RKSQVGTGDRSEKIRTYNF-PQGRVSDHRINLTIHQLDKILDGELEPVVEALI 349 >gi|307722037|ref|YP_003893177.1| bacterial peptide chain release factor 1 (bRF-1) [Sulfurimonas autotrophica DSM 16294] gi|306980130|gb|ADN10165.1| bacterial peptide chain release factor 1 (bRF-1) [Sulfurimonas autotrophica DSM 16294] Length = 355 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 109/341 (31%), Positives = 177/341 (51%), Gaps = 9/341 (2%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 + R + L+ P + ++ L +E+ L + KE + + + E+ + Sbjct: 10 INRYNELSEMLSSPDITSDIKRMTELSKEQSSLLPIVEKTKEYKALIEEISDSKEMLSDP 69 Query: 80 DDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 + + +E L+ L E + L D + +E+ AGAGG E+ + L Sbjct: 70 EMGDMAKEELKELEPQVPLIEEEIKMLLLPKDPNDDRNIIVELRAGAGGDEAAIFVGDLF 129 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 YTR+A+ + +K E + + G K LIKG Y LK E G HR+ R+ +S Sbjct: 130 DAYTRYADLKGWKIELMSSSPSDAGGYKEVVALIKGEQVYSRLKYEGGTHRVQRVPQTES 189 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R HTS ++ V P D +EIEI+E+D +ID R+SG GGQ VNTTDSAVRITH+P+G Sbjct: 190 QGRVHTSAITVAVMP-EVDDVEIEINENDLKIDVMRSSGCGGQSVNTTDSAVRITHLPSG 248 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSY 315 +VV Q ++SQHKN+ +A +L+A+LY+L++Q E A ++G G +IR+Y Sbjct: 249 LVVTNQDQKSQHKNREKAMKVLKARLYDLQMQ--EAQAEDAAQRAAQVGTGDRSGRIRTY 306 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 P + D R N+ ++++ G LD+ ++ +A + Sbjct: 307 NY-PQNRISDHRINLTLYRLNEIMSGGLLDEIIEPLIADHQ 346 >gi|308126586|ref|ZP_05911115.2| peptide chain release factor 2 [Vibrio parahaemolyticus AQ4037] gi|308107642|gb|EFO45182.1| peptide chain release factor 2 [Vibrio parahaemolyticus AQ4037] Length = 260 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 150/258 (58%), Positives = 196/258 (75%), Gaps = 1/258 (0%) Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 ++ ++ +F + SG+ D++D Y+++ AG+GGTE+QDW NM+LRMY RWAE + FK E Sbjct: 1 MEEKLAQLEFRRMFSGDHDNSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKAEV 60 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +E+ +GE AG+KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSF+S ++YP Sbjct: 61 IEVSEGEVAGLKSATVRISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPE 120 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D++I I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK Sbjct: 121 IDENIAIDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKD 180 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 QA LRAKL+ELELQK+ E +K++IGWG QIRSYVL +KDLRT +E + Sbjct: 181 QAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRN 239 Query: 335 PSDVLDGDLDDFMKATLA 352 VLDGDLD F++A+L Sbjct: 240 TQAVLDGDLDKFIEASLK 257 >gi|83319336|ref|YP_424135.1| peptide chain release factor 1 [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|90110051|sp|P71496|RF1_MYCCT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|83283222|gb|ABC01154.1| peptide chain release factor 1 [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 363 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 118/347 (34%), Positives = 182/347 (52%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---LCDNLIL 72 + +RL + ED ++ +++ + L +E+ +L+ + E + + D + Sbjct: 9 LETMQKRLFQIQKDLEDENILKDIKKFTELNKEKANLEEVVEKFVEYKKAVDHIKDAKAI 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LE + + + + D ++ + L D + +E+ AGG E+ Sbjct: 69 LENEKDSELIELAKIELDENNDKVEHLQQVIEEMLLPKDPNDEKNVIIEIRGAAGGDEAN 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY +AE + +K LE GE G +IKG Y LK E G HR+ Sbjct: 129 IFAGDLLRMYKLYAETQNWKINILEASLGEAGGYSQVVFMIKGDRVYSKLKFESGAHRVQ 188 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R TS +++ V P +EIEI +D RIDTYRASGAGGQHVNTTDSAVR Sbjct: 189 RVPKTEAKGRIQTSTATVAVLP-EMSEVEIEIRSNDLRIDTYRASGAGGQHVNTTDSAVR 247 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV Q RSQH NK A MLRAK+YE E++K++ A+ + K +G G Sbjct: 248 ITHLPTGIVVTSQDGRSQHDNKDIAMTMLRAKVYEAEVEKQQAQAD--ATRKNAVGTGAR 305 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + V++G++D+F+ A + ++ Sbjct: 306 SEKIRTYNY-PQNRVTDHRVGLTLNKLDQVMEGNIDEFIIALINEEQ 351 >gi|110598269|ref|ZP_01386544.1| peptide chain release factor 1 [Chlorobium ferrooxidans DSM 13031] gi|110340077|gb|EAT58577.1| peptide chain release factor 1 [Chlorobium ferrooxidans DSM 13031] Length = 357 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 105/352 (29%), Positives = 173/352 (49%), Gaps = 13/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + ++ L DP+ + + L +E L + + Sbjct: 1 MLDKLQSIKEKHLDLEQLLADPNAATDQARFRKLNKEYSDLREIVQAYDAYGQAKTELDQ 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 +L E D + + + ++ ++ + L EADS + +E+ AG GG Sbjct: 61 SKKLLDSESDPEMRELVQAEISELQKKLPELEQHLKVLLLPKDEADSRNVIVEIRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNAYGWLKGEQG 186 E+ +A +LRMY R+AEK+ +K E L ++ G + TL + G + YG +K E G Sbjct: 121 EEAALFAADILRMYQRYAEKQGWKCEVLHYNESSMPGGFREITLEVSGHDVYGTMKYESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ ++ R HTS S+ V P + +++EI D R DTYR+ G GGQ+VN Sbjct: 181 VHRVQRVPDTETQGRIHTSAVSVAVLP-EAEEVDVEIRREDLRFDTYRSGGKGGQNVNKV 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 ++AVRITH+PTG+V CQ+ERSQ +NK +A MLR KLY++ L ++ + ++ + Sbjct: 240 ETAVRITHMPTGIVSACQEERSQLQNKERAMKMLRTKLYDILLAEQVQQRADL--RRSMV 297 Query: 307 GWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G + IR+Y P V D R + +L G++ D + A + Sbjct: 298 TTGDRSAKIRTYNY-PQSRVTDHRIGFTSHALPQILQGEIQDIIDALKMHDQ 348 >gi|237743972|ref|ZP_04574453.1| peptide chain release factor 2 [Fusobacterium sp. 7_1] gi|256027415|ref|ZP_05441249.1| peptide chain release factor 2 [Fusobacterium sp. D11] gi|289765378|ref|ZP_06524756.1| peptide chain release factor 2 [Fusobacterium sp. D11] gi|229433003|gb|EEO43215.1| peptide chain release factor 2 [Fusobacterium sp. 7_1] gi|289716933|gb|EFD80945.1| peptide chain release factor 2 [Fusobacterium sp. D11] Length = 308 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 148/303 (48%), Positives = 208/303 (68%), Gaps = 1/303 (0%) Query: 53 DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112 N +S +++ + D +L++ + + + + +K +VE + LL GE Sbjct: 5 KNIVSRYEKLATEIEDEEVLIDFVESGETSFESELSE-KHKILKNDVEEFEINLLLDGEY 63 Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D N+A + +H+GAGGTE+ DWA+ML RMY RW + +K L+ +G+ G+KS T L+ Sbjct: 64 DMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKNYKVTELDFMEGDSVGVKSVTFLV 123 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G NAYG+LK E+GVHRLVRISP+D+N +RHTSF+S+ V P VD+++E+EI +D RIDT Sbjct: 124 EGINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDENVEVEIDPADIRIDT 183 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQHVN TDSAVRITH P+G+VV CQ+ERSQ N+ A ML++KL ELE++K+ Sbjct: 184 YRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQLSNRETAMKMLKSKLLELEIKKK 243 Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 EE + +++IGWG QIRSYV QPY +VKD RTN E + V+DG +DDF+ + L Sbjct: 244 EEEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDHRTNTEIGNVKAVMDGSIDDFINSYLR 303 Query: 353 IKK 355 K Sbjct: 304 WIK 306 >gi|86152274|ref|ZP_01070485.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni 260.94] gi|121613478|ref|YP_001001255.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni 81-176] gi|148925756|ref|ZP_01809444.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni CG8486] gi|157415831|ref|YP_001483087.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni 81116] gi|166223544|sp|A1W1L4|RF1_CAMJJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|172047202|sp|A8FNS3|RF1_CAMJ8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|85840763|gb|EAQ58014.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni 260.94] gi|87249710|gb|EAQ72669.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni 81-176] gi|145845766|gb|EDK22857.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni CG8486] gi|157386795|gb|ABV53110.1| peptide chain release factor RF-1 [Campylobacter jejuni subsp. jejuni 81116] gi|307748468|gb|ADN91738.1| Peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni M1] gi|315931656|gb|EFV10617.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni 327] Length = 355 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 114/345 (33%), Positives = 179/345 (51%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R LN+ + ++ + L +E+++L+ + KE L + L Sbjct: 6 LDPFLKRFEELNSLLSSSDILNDISKMTTLSKEQKNLEPIVLKAKEYLKTLDNIEENKAL 65 Query: 76 ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + +E + E + L D + +LE+ AG GG E+ + Sbjct: 66 LNDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGTGGDEASLFV 125 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L++ Y R+AE R +K E + +G G K +L+KG AY LK E G HR+ R+ Sbjct: 126 GDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHRVQRVP 185 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P D IEIEI+ +D ++D R+SG GGQ VNTTDSAVRITH Sbjct: 186 QTESQGRVHTSAITVAVMP-EVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVRITH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV Q +SQHKNK A +L+A+LY E+Q+ E +A E+ K+++G G + Sbjct: 245 IPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQESERLAKESEARKSQVGSGDRSER 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++ DG D+ ++ + + Sbjct: 303 IRTYNF-PQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQ 346 >gi|28897286|ref|NP_796891.1| peptide chain release factor 2 [Vibrio parahaemolyticus RIMD 2210633] gi|153839363|ref|ZP_01992030.1| peptide chain release factor 2 [Vibrio parahaemolyticus AQ3810] gi|308094351|ref|ZP_05888606.2| peptide chain release factor 2 [Vibrio parahaemolyticus AN-5034] gi|308095310|ref|ZP_05904925.2| peptide chain release factor 2 [Vibrio parahaemolyticus Peru-466] gi|308125643|ref|ZP_05776404.2| peptide chain release factor 2 [Vibrio parahaemolyticus K5030] gi|28805495|dbj|BAC58775.1| peptide chain release factor 2 [Vibrio parahaemolyticus RIMD 2210633] gi|149747111|gb|EDM58099.1| peptide chain release factor 2 [Vibrio parahaemolyticus AQ3810] gi|308088411|gb|EFO38106.1| peptide chain release factor 2 [Vibrio parahaemolyticus Peru-466] gi|308093009|gb|EFO42704.1| peptide chain release factor 2 [Vibrio parahaemolyticus AN-5034] gi|308113324|gb|EFO50864.1| peptide chain release factor 2 [Vibrio parahaemolyticus K5030] Length = 260 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 151/258 (58%), Positives = 196/258 (75%), Gaps = 1/258 (0%) Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 ++ ++ +F + SG+ DS+D Y+++ AG+GGTE+QDW NM+LRMY RWAE + FK E Sbjct: 1 MEEKLAQLEFRRMFSGDHDSSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKAEV 60 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +E+ +GE AG+KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSF+S ++YP Sbjct: 61 IEVSEGEVAGLKSATVRISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPE 120 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D++I I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK Sbjct: 121 IDENIAIDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKD 180 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 QA LRAKL+ELELQK+ E +K++IGWG QIRSYVL +KDLRT +E + Sbjct: 181 QAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRN 239 Query: 335 PSDVLDGDLDDFMKATLA 352 VLDGDLD F++A+L Sbjct: 240 TQAVLDGDLDKFIEASLK 257 >gi|229823150|ref|ZP_04449219.1| hypothetical protein GCWU000282_00447 [Catonella morbi ATCC 51271] gi|229787316|gb|EEP23430.1| hypothetical protein GCWU000282_00447 [Catonella morbi ATCC 51271] Length = 359 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 111/351 (31%), Positives = 176/351 (50%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ D + R L+ DP + + + L E L ++ IK + + Sbjct: 1 MFEQLDALIFRFEELHELLSDPEVISDSKRLRELTIEEADLSPKVAKIKRYKQVQQEIKD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGG 127 E+ E D + + L +K E + E L D + +E+ AGG Sbjct: 61 TEEMLGEGLDADMAELAKMELAELKAEKPRLEEEIKVMMLPEDPNDGKNIIMEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+Q +A LL MYTR+A+ + +K E L+ + G K +L+I G Y LK E G Sbjct: 121 DEAQLFAGDLLNMYTRYADSQGWKVEVLDANITGIGGYKEVSLMITGHKVYSKLKFENGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +++++ ++D R+D Y ASGAGGQHVN T Sbjct: 181 HRVQRVPETESQGRVHTSTATVVVMP-EAEEVDLDLKDADIRVDIYHASGAGGQHVNKTA 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTGVVV Q ERSQ KN+ +A +LRA++Y++ + E A + K +G Sbjct: 240 SAVRLTHLPTGVVVAMQDERSQLKNREKAMKVLRARVYDML--QSEAQAEYDSNRKLAVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + ++ G LD+ + + + Sbjct: 298 TGDRSERIRTYNY-PQNRVTDHRIGLTIQQLDAIMSGKLDEIIDGLVLFDQ 347 >gi|329965246|ref|ZP_08302176.1| peptide chain release factor 1 [Bacteroides fluxus YIT 12057] gi|328523266|gb|EGF50366.1| peptide chain release factor 1 [Bacteroides fluxus YIT 12057] Length = 370 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 97/354 (27%), Positives = 166/354 (46%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V R ++T DP + + L +E + L + ++ KE L E+ Sbjct: 11 LEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMNARKEYMQILSGIEEAKEI 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + L + + + + DS +A LE+ G GG E+ Sbjct: 71 MANETDPEMREMAREELDTCQSRQPELEEQIKLLLVPADPQDSRNAILEIRGGTGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYT++ E + ++ E ++G G K I G YG +K E GVHR+ Sbjct: 131 IFAGDLFRMYTKYCETKGWRMEISSANEGSAGGFKEIVCSITGDGVYGTMKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +S+ V P ++ + I+E + + DT+R+ GAGGQ+VN +S VR Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKVESGVR 249 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + + ++++C + R Q KNK +A + LR +Y+ E QK I +I K Sbjct: 250 LRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRK 307 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 T + G + IR+Y P + D R N + + +DGD+ D + + + Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360 >gi|269121056|ref|YP_003309233.1| peptide chain release factor 1 [Sebaldella termitidis ATCC 33386] gi|268614934|gb|ACZ09302.1| peptide chain release factor 1 [Sebaldella termitidis ATCC 33386] Length = 359 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 120/351 (34%), Positives = 192/351 (54%), Gaps = 11/351 (3%) Query: 13 LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F D+ V++ L DP + + + + +++ + K +D+ + Sbjct: 1 MFQKLDDVVKKHEELTQLLMDPVVTSDPKKIMEYNKALNSINDVVEKYKYYKDKKEELAS 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGG 127 L E E D + + + ++ ++ E+ + L D + +E+ AGAGG Sbjct: 61 LKEDLKNEKDNEMKEMILEEIKNVEEEIPNIEEELKILLLPQDPNDEKNVIMEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RM++R+AE+ K+K E ++ +D G+K LIKG AY LK E GV Sbjct: 121 DEAALFAYDVFRMFSRYAERNKWKVEVIDRNDIGVGGLKEIVFLIKGKGAYSKLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S+ R HTS ++ V P +DD ++EI+ D ++DTYRASGAGGQHVNTTD Sbjct: 181 HRVQRVPDTESSGRIHTSTITVAVLPEIDDVSQVEINPGDLKVDTYRASGAGGQHVNTTD 240 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTG+VV Q ERSQ KN+ +A +L +K+YE+E++++ + + ++G Sbjct: 241 SAVRITHIPTGIVVTSQDERSQLKNRERAMKVLASKIYEMEVEEQRKTVE--SERRLQVG 298 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + VLDGDL + + A A + Sbjct: 299 SGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDQVLDGDLVELIDALTAYAQ 348 >gi|83859678|ref|ZP_00953198.1| peptide chain release factor 1 [Oceanicaulis alexandrii HTCC2633] gi|83852037|gb|EAP89891.1| peptide chain release factor 1 [Oceanicaulis alexandrii HTCC2633] Length = 357 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 110/348 (31%), Positives = 174/348 (50%), Gaps = 16/348 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + R + + + E L +E L +E++ + Sbjct: 8 LDQVIDRFDQVEARLSA---AADPDEIVKLSKEHAELKLVAEKARELKTARESFEEAEAI 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 + D +++ + Q +K + + + D LE+ AG GG E+ Sbjct: 65 IEDGSDRDMVELAEEERQELKKRLPGLERELQLLLIPKDRDDDASIMLEIRAGTGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R+A +K + +E + E G K + G +G +K E GVHR+ Sbjct: 125 LFAGDLFRMYERYASNHGWKVDVVEASEAEVGGYKEIVASVSGKGVFGKMKFESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P +++EI+I + D RIDT RASGAGGQHVN T+SAVR Sbjct: 185 RVPVTESGGRIHTSAATVAVLP-EPENVEIDIKDEDIRIDTMRASGAGGQHVNKTESAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTG+VV E+SQH+N+A A +L+A+LYE E ++++E K ++G G Sbjct: 244 MTHIPTGIVV-VSSEKSQHQNRAIAMQVLKARLYEKERREKDEAR--AAERKGQVGSGDR 300 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 +IR+Y P V D R N+ ++L GD LD+ + A L+ + Sbjct: 301 SERIRTYNF-PQGRVSDHRINLTLYKLDEILSGDALDEVIDALLSEDQ 347 >gi|332531395|ref|ZP_08407299.1| hypothetical protein HGR_15544 [Hylemonella gracilis ATCC 19624] gi|332039064|gb|EGI75486.1| hypothetical protein HGR_15544 [Hylemonella gracilis ATCC 19624] Length = 248 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 141/247 (57%), Positives = 185/247 (74%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + + AD A+L++ AGAGGTE+ DWA+MLLR Y ++AE++ FK + G+ AGIK Sbjct: 1 MFNNPADPLPAFLDIQAGAGGTEACDWASMLLRQYLKYAERKGFKATVEDETPGDTAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ I+G A+G L+ E GVHRLVR SP+DS+ RHTSF+SI+VYP +DD+IEIEI+ + Sbjct: 61 SATIKIEGDYAFGLLRTETGVHRLVRKSPFDSSGGRHTSFASIFVYPEIDDTIEIEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D R DT+RASGAGGQH+N TDSAVR+THIPTG+VVQCQ RSQH N+ AW LR++LY+ Sbjct: 121 DVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYD 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 E++KR E E +KT++GWG QIRSYVL +KDLRTN E ++ VLDGDLD F Sbjct: 181 FEMRKRMEEQQKLEDTKTDVGWGHQIRSYVLD-QSRIKDLRTNYETSATQKVLDGDLDPF 239 Query: 347 MKATLAI 353 ++A+L Sbjct: 240 IEASLKQ 246 >gi|295397091|ref|ZP_06807203.1| peptide chain release factor RF1 [Aerococcus viridans ATCC 11563] gi|294974683|gb|EFG50398.1| peptide chain release factor RF1 [Aerococcus viridans ATCC 11563] Length = 357 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 104/347 (29%), Positives = 171/347 (49%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72 D+ + R + + DP + + + + +E L + + + D L Sbjct: 6 LDSFIARYAEVTELMSDPDVINDNQRFRAISKEEADLRPKVETFSHYKDVIQAIEDTEEL 65 Query: 73 LELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L + +++ + +E L+ + E + + S D + +E+ AGG E+Q Sbjct: 66 LAESSDDEMTELAKEELKELKAERESLEEEIKRLMIPSDPNDDKNIIMEIRGAAGGDEAQ 125 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MY+R+A + ++ E +E + G K TL I+G Y LK E G HR+ Sbjct: 126 LFAGDLYEMYSRYATSQGWRVEVIESSSNDIGGFKEITLQIQGDKVYSKLKFESGAHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + I+ ++ E D RID YRASGAGGQHVN T SAVR Sbjct: 186 RVPDTESQGRVHTSTATVGVMP-ELEDIDFDLDEGDIRIDIYRASGAGGQHVNKTSSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH PTG+ V Q +RSQ +NK +A +LR+++YE +++ K +G G Sbjct: 245 LTHEPTGIQVAMQDQRSQQQNKDKAMMILRSRVYEKIASEQQNE--YDSQRKNLVGTGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + ++ G+LD+ + A L + Sbjct: 303 SERIRTYNY-PQNRVTDHRIGLTIQKLDRIMTGELDEIVDALLLADQ 348 >gi|256384120|gb|ACU78690.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. capri str. GM12] gi|256384952|gb|ACU79521.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. capri str. GM12] gi|296455380|gb|ADH21615.1| peptide chain release factor 1 [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 364 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 116/347 (33%), Positives = 181/347 (52%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +RL + ED ++ +++ + L +E+ +L+ + E + + + Sbjct: 9 LETMQKRLLQILKDLEDENILKDIKKFTELNKEKSNLEEVVEKFVEYKQAVEHIKDAKVI 68 Query: 76 ALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D +++ +++ + + L D + +E+ AGG E+ Sbjct: 69 LENEKDQELIELAKIELDENNDKVEHLQQVIEEMLLPKDPNDDKNVIVEIRGAAGGDEAN 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY +AE + +K LE GE G +IKG Y LK E G HR+ Sbjct: 129 IFAGDLLRMYKLYAETQNWKINILEASVGEAGGYSQVVFMIKGDRVYSKLKFESGAHRVQ 188 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R TS +++ V P +EIEI +D RIDTYRASGAGGQHVNTTDSAVR Sbjct: 189 RVPKTEAKGRIQTSTATVAVLP-EMSEVEIEIRSNDLRIDTYRASGAGGQHVNTTDSAVR 247 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV Q RSQH NK A MLRAK+YE E++K++ A+ + K +G G Sbjct: 248 ITHLPTGIVVTSQDGRSQHDNKDIAMTMLRAKVYEAEVEKQQAQAD--ATRKNAVGTGAR 305 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + V++G++D+F+ A + ++ Sbjct: 306 SEKIRTYNY-PQNRVTDHRVGLTLNKLDQVMEGNIDEFIIALINEEQ 351 >gi|163746457|ref|ZP_02153815.1| peptide chain release factor 1 [Oceanibulbus indolifex HEL-45] gi|161380342|gb|EDQ04753.1| peptide chain release factor 1 [Oceanibulbus indolifex HEL-45] Length = 351 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 117/341 (34%), Positives = 170/341 (49%), Gaps = 12/341 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 QR FL + + L +E L + I Q D E+ Sbjct: 7 LAQISQRFQFLEASMSAG---SDGADFAALAKEYSDLKPVVDQIDLYQQLQRDLEEAQEM 63 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E L+ Q L AD+ A LE+ G GG E+ +A Sbjct: 64 LKDPEMAELAREELPRLRARLPEVEGALQLALLPRDAADAKPAMLEIRPGTGGDEAALFA 123 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE R + + +E E G+K I G N + LK E GVHR+ R+ Sbjct: 124 GDLLRMYQRYAEARGWGFDLIESQMTELGGVKEVVAHITGQNVFARLKFESGVHRVQRVP 183 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P + ++IEI+ +D RIDT R+SGAGGQHVNTTDSAVRITH Sbjct: 184 STESGGRIHTSAATVAVLP-EAEDVDIEINANDLRIDTMRSSGAGGQHVNTTDSAVRITH 242 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV E+SQH+N+ +A +L+A+LY++E + + ++G G + Sbjct: 243 IPTGIVVTSS-EKSQHRNRDKAMQVLKARLYDMERGRIDSER--SADRAAQVGSGDRSER 299 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IR+Y P + D R N+ V+ GDLD+ + A A Sbjct: 300 IRTYNF-PQGRMTDHRINLTLYRLEAVMQGDLDEIIDALTA 339 >gi|182435969|ref|YP_001823688.1| peptide chain release factor 1 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326776593|ref|ZP_08235858.1| Peptide chain release factor 1 [Streptomyces cf. griseus XylebKG-1] gi|238689014|sp|B1W0B6|RF1_STRGG RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|178464485|dbj|BAG19005.1| putative peptide chain release factor 1 [Streptomyces griseus subsp. griseus NBRC 13350] gi|326656926|gb|EGE41772.1| Peptide chain release factor 1 [Streptomyces cf. griseus XylebKG-1] Length = 358 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 114/354 (32%), Positives = 176/354 (49%), Gaps = 16/354 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + + + L K DP + + A+ L + L +S + + D Sbjct: 1 MFEAVEELIGEHTGLEKKLADPSVHADQANARKLNKRYAELTPIVSTYRAWKQTGEDIET 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E DD E + ++ + E + + +D D LE+ AGAGG ES Sbjct: 61 AREF--AADDPDFAAEVKELEKQREEITEKLRLLLVPRDPSDDKDVLLEIKAGAGGDESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG----------PNAYGWL 181 +A LLRMY R+AE+ +KTE ++ + E G K + +K + + Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVAVKTKGGNGATEPGQGVWARM 178 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHR+ R+ +S R HTS + + V P + +++EI +D RID YR+SG GGQ Sbjct: 179 KYEGGVHRVQRVPSTESQGRIHTSAAGVLVTP-EAEEVDVEIHANDLRIDVYRSSGPGGQ 237 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PTGVV CQ E+SQ +NK QA +LR++L + E+ A+ Sbjct: 238 SVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEAAEQEASDVRR 297 Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 S+ + +IR+Y P + D R + + VLDG+LD ++A + Sbjct: 298 SQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGELDAVIQACVDAD 350 >gi|304373116|ref|YP_003856325.1| Peptide chain release factor 1 [Mycoplasma hyorhinis HUB-1] gi|304309307|gb|ADM21787.1| Peptide chain release factor 1 [Mycoplasma hyorhinis HUB-1] Length = 361 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 111/349 (31%), Positives = 176/349 (50%), Gaps = 6/349 (1%) Query: 11 GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---L 66 + + ++ ++ L+ + DP + N+ E + +E +++ + K + + Sbjct: 3 KSMLNSLNSIKEKYEHLSNQLLDPEIVSNIKEYTKINKELASIEDIVLAFKNYLKQVSII 62 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D+ LL+ E +E + ++I+ + L E D + +E+ AG Sbjct: 63 EDSKKLLQEKDVEIHNLAKEEITLATKKIEEIEKELVVLLLPKDENDDKNVIVEIRGAAG 122 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ + L +MY +WAE +K+ + L G L+ G Y LK E G Sbjct: 123 GDEANIFVGDLYKMYLKWAESKKWSVKVLNSSLASAGGFTQIVFLVSGDKVYSKLKFESG 182 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ RI ++ R HTS +++ + P VDD I+++I D RIDTYR+SGAGGQ VNTT Sbjct: 183 VHRVQRIPETETQGRVHTSTTTVTIMPEVDDDIQVDIKAQDLRIDTYRSSGAGGQSVNTT 242 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIPTG+V Q RSQ NK A +L++K+Y LE++K++ I Sbjct: 243 DSAVRITHIPTGLVSTSQDGRSQIANKELALKILKSKIYNLEVEKKQAIEGQFRKLAGSG 302 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + + +V+ G+LD + A LA K Sbjct: 303 ARSEKIRTYNY-PQDRVTDHRISFSTS-LKNVIVGNLDPIIDALLAEDK 349 >gi|313899685|ref|ZP_07833188.1| peptide chain release factor 1 [Clostridium sp. HGF2] gi|312955300|gb|EFR36965.1| peptide chain release factor 1 [Clostridium sp. HGF2] Length = 357 Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats. Identities = 111/346 (32%), Positives = 174/346 (50%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72 + V R +N P + + L RE+ L + E ++ L D L Sbjct: 8 LEGMVNRYHEINEMMMSPEIVTDSRMLAKLGREQADLTQVVETYTEYKNSVSALEDAKAL 67 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L +E E + +I+ +E + + DS++A +E+ AGG E Sbjct: 68 LLEDDKEIKEMAKMEIEELEPKIEEYLEKLEILLIPKDPNDSHNAIVEIRGAAGGDEGNI 127 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AE + +K E +E+ D E G + ++KG YG LK E G HR+ R Sbjct: 128 FAGDLYRMYSKFAESQGWKIEIVEMDDCEAGGFSLVSFMVKGDGVYGKLKFESGSHRVQR 187 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS +++ V P + + +I +D ++T RASGAGGQH+N TDSAVRI Sbjct: 188 VPKTESQGRIHTSTATVLVTP-EIEPEDFDIDMNDLEMETMRASGAGGQHINKTDSAVRI 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 H PTG+ V+CQ RSQH+N+A A +R+++YE +K EE I + +IG G Sbjct: 247 VHKPTGITVKCQDGRSQHENRATALMTIRSRVYEEHQRKLEEEQGI--ERRNKIGTGDRA 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R +++G + D + A L+ + Sbjct: 305 EKIRTYNY-PQNRVTDHRIGYTVNQLDRIMEGRMQDLLDALLSADQ 349 >gi|256112206|ref|ZP_05453127.1| peptide chain release factor 1 [Brucella melitensis bv. 3 str. Ether] Length = 359 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 115/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R S + ++ + P + L E L + + I+E+ D + L + Sbjct: 10 DQLLKRFSMIESQMANNP----DSDSYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + ++ + + + Q L AD +A LE+ AG GG E+ Sbjct: 66 RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A ++ ++ E + +G+ G K + G + LK E GVHR+ Sbjct: 126 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + I+IEI D RIDT RASGAGGQHVNTTDSAV Sbjct: 186 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG++V Q E+SQH+N+A+A +LRA+LY++E QK + ++ ++++G G Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V++G+LD+ + A ++ + Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGELDELVDALISDHQ 348 >gi|260467160|ref|ZP_05813338.1| peptide chain release factor 1 [Mesorhizobium opportunistum WSM2075] gi|259029084|gb|EEW30382.1| peptide chain release factor 1 [Mesorhizobium opportunistum WSM2075] Length = 359 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 115/348 (33%), Positives = 185/348 (53%), Gaps = 18/348 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V+R L + P + E L ++ ++ ++ + L + Sbjct: 10 DQVVKRFEMLEAQMSAGPA----PDAYVKMASEYAELQEMVAKVRALRSAEHEQADLEAM 65 Query: 76 ALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 ++ + ++ ++ +RI+ + Q L AD +A LE+ AG GG E+ Sbjct: 66 LADKGTDAEMRALAEADLPGVEERIEALQKDIQLLLLPRDAADDKNAILEIRAGTGGDEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A + ++ E + DG+ G K I G + LK E GVHR+ Sbjct: 126 ALFAGDLFRMYERYAAEHGWRFETVSASDGDAGGFKEIIATISGRGVFAHLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +++ R HTS +++ V P + ++I+I D RIDT RASG+GGQHVNTTDSAV Sbjct: 186 QRVPATEASGRIHTSAATVAVLP-EAEEVDIDIRAEDIRIDTMRASGSGGQHVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG++V Q E+SQH+N+A+A +LRA+LY++E K +E E+ K+++G G Sbjct: 245 RITHLPTGIMV-VQAEKSQHQNRAKAMQILRARLYDMERSKADEER--SEARKSQVGSGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+ G+LD+ + A +A + Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMMGELDEVIDALIADHQ 348 >gi|331703153|ref|YP_004399840.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328801708|emb|CBW53861.1| Peptide chain release factor 1 [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 364 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 116/347 (33%), Positives = 181/347 (52%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +RL + ED ++ +++ + L +E+ +L+ + E + + + Sbjct: 9 LETMQKRLLQILKDLEDENILKDIKKFTELNKEKSNLEEVVEKFVEYKQAVEHIKDAKAI 68 Query: 76 ALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D +++ +++ + + L D + +E+ AGG E+ Sbjct: 69 LENEKDQELIELAKIELDENNDKVEHLQQVIEEMLLPKDPNDDKNVIVEIRGAAGGDEAN 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY +AE + +K LE GE G +IKG Y LK E G HR+ Sbjct: 129 IFAGDLLRMYKLYAETQNWKINILEASVGEAGGYSQVVFMIKGDRVYSKLKFESGAHRVQ 188 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R TS +++ V P +EIEI +D RIDTYRASGAGGQHVNTTDSAVR Sbjct: 189 RVPKTEAKGRIQTSTATVAVLP-EMSEVEIEIRSNDLRIDTYRASGAGGQHVNTTDSAVR 247 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV Q RSQH NK A MLRAK+YE E++K++ A+ + K +G G Sbjct: 248 ITHLPTGIVVTSQDGRSQHDNKDIAMTMLRAKVYEAEVEKQQAQAD--ATRKNAVGTGAR 305 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + V++G++D+F+ A + ++ Sbjct: 306 SEKIRTYNY-PQNRVTDHRVGLTLNKLDQVMEGNIDEFIIALINEEQ 351 >gi|291514939|emb|CBK64149.1| bacterial peptide chain release factor 1 (bRF-1) [Alistipes shahii WAL 8301] Length = 361 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 108/346 (31%), Positives = 169/346 (48%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI---- 71 D + K DP + +V + L +E + L+ I + + + + Sbjct: 10 LDGLKLKYEETGQKLTDPEVIADVKQFIQLTKEYKELEPIIETSERYRTAIANLAEAKDT 69 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L EE + ++ ++ E + + DS +A +E+ G GG E+ Sbjct: 70 LATDKDEEMREMAREMIAELEPQLAQMEEEIKLLLIPKDPQDSKNAIVEIRGGTGGDEAA 129 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMYT++ E + ++ E DG G K L + G N YG LK E GVHR+ Sbjct: 130 IFAGDLLRMYTKYIESKGWRYEITSSSDGAAGGFKEVVLKVSGQNVYGTLKYESGVHRVQ 189 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +S+ V P ++ IS +D R D + ASG GGQ VNTT SA+R Sbjct: 190 RVPQTETQGRVHTSAASVAVLPEAEEFDIE-ISMNDIRKDIFCASGPGGQSVNTTYSAIR 248 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +THIPTG+VVQCQ ++SQ KN +A+ LR +++ LE K + I KT + G + Sbjct: 249 LTHIPTGIVVQCQDQKSQLKNFDKAFEELRTRVFNLEYSKYLDE--IASKRKTMVSTGDR 306 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P + D R N + + +DGD+ D + + + Sbjct: 307 SAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 351 >gi|256850891|ref|ZP_05556280.1| peptide chain release factor 1 [Lactobacillus jensenii 27-2-CHN] gi|260661105|ref|ZP_05862019.1| peptide chain release factor 1 [Lactobacillus jensenii 115-3-CHN] gi|282934197|ref|ZP_06339475.1| peptide chain release factor 1 [Lactobacillus jensenii 208-1] gi|297205768|ref|ZP_06923163.1| peptide chain release factor RF1 [Lactobacillus jensenii JV-V16] gi|256615953|gb|EEU21141.1| peptide chain release factor 1 [Lactobacillus jensenii 27-2-CHN] gi|260548042|gb|EEX24018.1| peptide chain release factor 1 [Lactobacillus jensenii 115-3-CHN] gi|281301811|gb|EFA94077.1| peptide chain release factor 1 [Lactobacillus jensenii 208-1] gi|297148894|gb|EFH29192.1| peptide chain release factor RF1 [Lactobacillus jensenii JV-V16] Length = 362 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 99/343 (28%), Positives = 170/343 (49%), Gaps = 11/343 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V R + DP + + + +E + + ++ Q+ E+ Sbjct: 8 LEGLVARYEEIQELMADPEVINDTKRYMEISKEEADMREVVQKYRKYQEDQKTISDNKEI 67 Query: 76 ALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D +++ + + + E + L D D +E+ AGG E+ Sbjct: 68 IENESDEDLVEMAKEENSDLEKEVAELEEEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY ++AE + +K ++ E G K ++I G Y LK E G HR+ Sbjct: 128 LFAGDLLRMYEKYAETQGWKISVIDEETTEVGGYKHVAIMITGDKVYSKLKYENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ V P + ++I++ D R+D YR+SGAGGQH+N T SAVR Sbjct: 188 RIPVTESQGRVHTSTATVAVMP-EYEQVDIDLDPKDIRVDVYRSSGAGGQHINKTSSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q +RSQ +N+A+A +L++++Y+ + + A+ E K +G G Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQNQ--ASYDEKRKNAVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P V D R + +++G+LD+ + A + Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIISALI 346 >gi|255326261|ref|ZP_05367347.1| peptide chain release factor 1 [Rothia mucilaginosa ATCC 25296] gi|283458332|ref|YP_003362953.1| protein chain release factor A [Rothia mucilaginosa DY-18] gi|255296715|gb|EET76046.1| peptide chain release factor 1 [Rothia mucilaginosa ATCC 25296] gi|283134368|dbj|BAI65133.1| protein chain release factor A [Rothia mucilaginosa DY-18] Length = 360 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 111/350 (31%), Positives = 179/350 (51%), Gaps = 11/350 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + + L + DP + N +A+ + R L ++ + D Sbjct: 1 MFESIQVLLDEHADLQNQLADPAVQANQGKARRVGRRYAELTGIVTAYNKYTSLKDDLEA 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E+A E+ D + + ++ E + + D + LEV AGAGG E+ Sbjct: 61 AREMADEDPDFAAEIPGLEEEL--EVAQEKLRRLLIPRDPDDGRNVILEVKAGAGGDEAA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI------KGPNAYGWLKGEQ 185 +A LLRMY R+AE + +KTE + + G K A + I + LK E Sbjct: 119 LFAGDLLRMYMRYAEHKGWKTEIISSTSTDVGGYKDAQIAIKGSSNEPAEGVWAHLKYEG 178 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ +S R HTS + + V+P VD+ EIEI+++D +ID YR+SG GGQ VNT Sbjct: 179 GVHRVQRVPATESQGRIHTSAAGVLVFPEVDEPEEIEINQNDLKIDVYRSSGPGGQSVNT 238 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITH+PTG+VV Q E+SQ +N+ A +LRA+L + ++ + +S+ Sbjct: 239 TDSAVRITHLPTGIVVAMQNEKSQLQNREAAMRVLRARLLAHQQEQIDAENAAHRASQVR 298 Query: 306 -IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +IR+Y P + D RT + + VL+GDL+ +++ + + Sbjct: 299 TMDRSERIRTYNF-PENRIADHRTGYKAYNLDAVLNGDLEPVVQSAIEMD 347 >gi|42560702|ref|NP_975153.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|61214633|sp|Q6MU89|RF1_MYCMS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|42492198|emb|CAE76795.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320433|gb|ADK69076.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 364 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 115/347 (33%), Positives = 180/347 (51%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +RL + ED ++ +++ + L +E+ +L+ + E + + + Sbjct: 9 LETMQKRLLQILKDLEDENILKDIKKFTELNKEKSNLEEVVEKFVEYKKAVEHIKDAKAI 68 Query: 76 ALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D +++ +++ + + L D + +E+ AGG E+ Sbjct: 69 LENEKDQELIELAKIELDENNDKVEHLQQVIEEMLLPKDPNDDKNVIVEIRGAAGGDEAN 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY +AE + +K LE GE G +IKG Y LK E G HR+ Sbjct: 129 IFAGDLLRMYKLYAETQNWKINILEASVGEAGGYSQVVFMIKGDRVYSKLKFESGAHRVQ 188 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R TS +++ V P +EIEI +D RIDTYRASGAGGQHVNTTDSAVR Sbjct: 189 RVPKTEAKGRIQTSTATVAVLP-EMSEVEIEIRSNDLRIDTYRASGAGGQHVNTTDSAVR 247 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV Q RSQH NK A MLR K+YE E++K++ A+ + K +G G Sbjct: 248 ITHLPTGIVVTSQDGRSQHDNKDIAMTMLRTKVYEAEVEKQQAQAD--ATRKNAVGTGAR 305 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + V++G++D+F+ A + ++ Sbjct: 306 SEKIRTYNY-PQNRVTDHRVGLTLNKLDQVMEGNIDEFIIALINEEQ 351 >gi|258542227|ref|YP_003187660.1| peptide chain release factor 1 [Acetobacter pasteurianus IFO 3283-01] gi|256633305|dbj|BAH99280.1| translation peptide chain release factor 1 (RF-1) [Acetobacter pasteurianus IFO 3283-01] gi|256636364|dbj|BAI02333.1| translation peptide chain release factor 1 (RF-1) [Acetobacter pasteurianus IFO 3283-03] gi|256639417|dbj|BAI05379.1| translation peptide chain release factor 1 (RF-1) [Acetobacter pasteurianus IFO 3283-07] gi|256642473|dbj|BAI08428.1| translation peptide chain release factor 1 (RF-1) [Acetobacter pasteurianus IFO 3283-22] gi|256645528|dbj|BAI11476.1| translation peptide chain release factor 1 (RF-1) [Acetobacter pasteurianus IFO 3283-26] gi|256648581|dbj|BAI14522.1| translation peptide chain release factor 1 (RF-1) [Acetobacter pasteurianus IFO 3283-32] gi|256651634|dbj|BAI17568.1| translation peptide chain release factor 1 (RF-1) [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654625|dbj|BAI20552.1| translation peptide chain release factor 1 (RF-1) [Acetobacter pasteurianus IFO 3283-12] Length = 352 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 108/348 (31%), Positives = 179/348 (51%), Gaps = 13/348 (3%) Query: 14 FD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 FD D V R L + N RE ++ ++ I +++ Sbjct: 3 FDERLDQIVSRALELEAQLASG---LNGEAFTQASREYAEIEPVVARINALREVEDGIQQ 59 Query: 72 LLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +L + + + + L+ + + + L AD+ A LEV AGG E+ Sbjct: 60 AEQLLADPEMKELAEAELAELREQLPQLQKDVRLSLLPKDVADARSAILEVRPAAGGDEA 119 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L MY R+A+ ++ ++ + E G++ I G + LK E GVHR+ Sbjct: 120 GLFAAELFDMYRRYADLNGWRFTVMDYDESELGGLREGIAEINGKGVFARLKYESGVHRV 179 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS ++ V P + +++E++E+D R+D +RASGAGGQHVN T+SAV Sbjct: 180 QRVPATESQGRIHTSTVTVAVLP-EAEEVDVEVNETDLRVDVFRASGAGGQHVNKTESAV 238 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+TH+P+G+VV Q+E+SQHKN+A+A +LRA+LY E ++ + AN ++++G G Sbjct: 239 RLTHMPSGIVVSMQEEKSQHKNRAKAMKILRARLY--ERERAQAHANRAADRRSQVGTGD 296 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+ G+LD+F+ A ++ Sbjct: 297 RSERIRTYNF-PQGRVTDHRINLTLYKIDRVMLGELDEFVDALTQEEQ 343 >gi|161511164|ref|NP_539109.2| peptide chain release factor 1 [Brucella melitensis bv. 1 str. 16M] gi|225853308|ref|YP_002733541.1| peptide chain release factor 1 [Brucella melitensis ATCC 23457] gi|260562790|ref|ZP_05833276.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str. 16M] gi|20139330|sp|Q8YJ95|RF1_BRUME RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790867|sp|C0RFB5|RF1_BRUMB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|225641673|gb|ACO01587.1| peptide chain release factor 1 [Brucella melitensis ATCC 23457] gi|260152806|gb|EEW87898.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str. 16M] Length = 359 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 115/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R S + ++ + P + L E L + + I+E+ D + L + Sbjct: 10 DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + ++ + + + Q L AD +A LE+ AG GG E+ Sbjct: 66 RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A ++ ++ E + +G+ G K + G + LK E GVHR+ Sbjct: 126 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + I+IEI D RIDT RASGAGGQHVNTTDSAV Sbjct: 186 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG++V Q E+SQH+N+A+A +LRA+LY++E QK + ++ ++++G G Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V++G+LD+ + A ++ + Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGELDELVDALISDHQ 348 >gi|320449105|ref|YP_004203663.1| peptide chain release factor 1 [Thermus scotoductus SA-01] gi|320151737|gb|ADW23114.1| peptide chain release factor 1 [Thermus scotoductus SA-01] Length = 354 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 109/329 (33%), Positives = 172/329 (52%), Gaps = 8/329 (2%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 DP + ++ + L R + I+ I+E + L D + L + + + + + Sbjct: 20 ADPEVLKDQKRYQALSRRYAEMGEVIALIREYRKVLEDLEGVEGLLEDPELKEVARAEKE 79 Query: 91 NLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L K ++E + L D DA +E+ AG GG E+ +A LL MY R+AE+ Sbjct: 80 ALLSRKADLEKALERHLLPKDPMDERDAIVEIRAGTGGEEAALFARDLLEMYLRFAEEMG 139 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+TE L+ H + G ++GP AYG K E GVHR+ R+ ++ R HTS +++ Sbjct: 140 FETEILDSHPTDLGGFSKVVFEVRGPGAYGTFKYESGVHRVQRVPATETQGRIHTSTATV 199 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P ++S +++ + RID RASG GGQ VNTTDSAVR+ H+PTG++V CQ RSQ Sbjct: 200 AVLPKAEESD-FQLNMDEIRIDVMRASGPGGQGVNTTDSAVRVVHLPTGIMVTCQDSRSQ 258 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDL 326 KN+ +A +LR++L LE+++ EE + ++ +IG G + IR+Y P V D Sbjct: 259 IKNREKALMILRSRL--LEMKRAEEAEKLRKTRLAQIGTGERSEKIRTYNF-PQSRVTDH 315 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R +L G L ++A + Sbjct: 316 RIGFTTHDLEGILSGHLQPLLEALKRADQ 344 >gi|283956995|ref|ZP_06374467.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni 1336] gi|283791496|gb|EFC30293.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni 1336] Length = 355 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 114/345 (33%), Positives = 179/345 (51%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R LN+ + ++ + L +E+++L+ + KE L + L Sbjct: 6 LDPFLKRFEELNSLLSSSDILNDISKMTTLSKEQKNLEPIVLKAKEYLKTLDNIEENKAL 65 Query: 76 ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + +E + E + L D + +LE+ AG GG E+ + Sbjct: 66 LNDPELGELAKEELKILEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGTGGDEASLFV 125 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L++ Y R+AE R +K E + +G G K +L+KG AY LK E G HR+ R+ Sbjct: 126 GDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHRVQRVP 185 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P D IEIEI+ +D ++D R+SG GGQ VNTTDSAVRITH Sbjct: 186 QTESQGRVHTSAITVAVMP-EVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVRITH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV Q +SQHKNK A +L+A+LY E+Q+ E +A E+ K+++G G + Sbjct: 245 IPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQESERLAKESEARKSQVGSGDRSER 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++ DG D+ ++ + + Sbjct: 303 IRTYNF-PQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQ 346 >gi|29349618|ref|NP_813121.1| peptide chain release factor 1 [Bacteroides thetaiotaomicron VPI-5482] gi|253570013|ref|ZP_04847422.1| peptide chain release factor 1 [Bacteroides sp. 1_1_6] gi|298383879|ref|ZP_06993440.1| peptide chain release factor 1 [Bacteroides sp. 1_1_14] gi|32171531|sp|Q8A011|RF1_BACTN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|29341528|gb|AAO79315.1| peptide chain release factor 1 [Bacteroides thetaiotaomicron VPI-5482] gi|251840394|gb|EES68476.1| peptide chain release factor 1 [Bacteroides sp. 1_1_6] gi|298263483|gb|EFI06346.1| peptide chain release factor 1 [Bacteroides sp. 1_1_14] Length = 370 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 102/354 (28%), Positives = 168/354 (47%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V R ++T DP + + L +E + LD+ + KE L + + Sbjct: 11 LDGLVARFEEISTLITDPAVIADQKRYVKLTKEYKDLDDLMKARKEYIQLLGNIEEAKNI 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAGGTESQ 131 E D + + + + + + + E L DS +A LE+ GAGG E+ Sbjct: 71 LSNESDADMREMAKEEMDNSQERLPALEEEIKLMLVPADPQDSKNAILEIRGGAGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY ++ E + +K E ++G G K + G N YG LK E GVHR+ Sbjct: 131 IFAGDLFRMYAKFCETKGWKMEVSNANEGTAGGYKEIVCSVTGDNVYGILKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +S+ V P ++ + I+E + + DT+R+ GAGGQ+VN +S VR Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKVESGVR 249 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + +I ++++C + R Q KNK +A LR +Y+ E QK I +I K Sbjct: 250 LRYIWKNPNTGVAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIASKRK 307 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 T + G + IR+Y P + D R N + + +DGD+ D + + + Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360 >gi|332140695|ref|YP_004426433.1| Protein chain release factor B, RF-2 [Alteromonas macleodii str. 'Deep ecotype'] gi|327550717|gb|AEA97435.1| Protein chain release factor B, RF-2 [Alteromonas macleodii str. 'Deep ecotype'] Length = 248 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 158/246 (64%), Positives = 190/246 (77%), Gaps = 1/246 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG D ND Y+++ +G+GGTE+QDWANMLLRMY RW E FKTE +E+ DG+ AGIK Sbjct: 1 MFSGPNDENDCYIDIQSGSGGTEAQDWANMLLRMYLRWGEAHGFKTELIEVSDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SATL I+G A+GWL+ E GVHRLVR SP+DS +RRHTSFSS +VYP +DD I+I+I+ S Sbjct: 61 SATLRIQGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSSAFVYPEIDDDIDIDINPS 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQHVN TDSAVRITH PTG+VVQCQ +RSQHKNK QA L+AKLYE Sbjct: 121 DLRIDTYRASGAGGQHVNRTDSAVRITHEPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ELQK+ E SK++IGWG QIRSYVL +KDLRT +E + VLDGDLD F Sbjct: 181 FELQKQNAEKQAMEDSKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKF 239 Query: 347 MKATLA 352 ++A+L Sbjct: 240 IEASLK 245 >gi|158336840|ref|YP_001518014.1| peptide chain release factor 2 [Acaryochloris marina MBIC11017] gi|158307081|gb|ABW28698.1| peptide chain release factor 2 [Acaryochloris marina MBIC11017] Length = 304 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 139/297 (46%), Positives = 203/297 (68%) Query: 58 FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117 +++ Q L D L+EL E+D +LQE + NL+++ +++ + + LLSG D A Sbjct: 3 QLQDWQGTLDDAEALVELLQLEEDAGLLQEAAGNLRQLNQQLDQWELQQLLSGPYDKVGA 62 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 L ++ GAGGT++QDWA MLLRMYTRW+E++ +K E+ +G+EAGIKSATL ++G A Sbjct: 63 VLTINTGAGGTDAQDWAEMLLRMYTRWSERQGYKVHLAELSEGDEAGIKSATLEVEGRYA 122 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 YG+LK E+G HRLVRISP+++N +R TSF+ I V P +D +E++I ++D I T R+ G Sbjct: 123 YGYLKAEKGTHRLVRISPFNANGKRQTSFAGIEVMPQLDHEVELDIPDTDLEITTSRSGG 182 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQ+VN ++AVRI H+PTG+ V+C QERSQ +NK +A +L+AKL + +++ + Sbjct: 183 KGGQNVNKVETAVRIVHVPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQKAKEIA 242 Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 E WG QIR+YV PYQMVKDLRTN E T+ V+DG LD+F++A L + Sbjct: 243 DIRGDAVEAAWGNQIRNYVFHPYQMVKDLRTNQETTAIESVMDGALDNFIEAYLRQE 299 >gi|332188246|ref|ZP_08389974.1| peptide chain release factor 1 [Sphingomonas sp. S17] gi|332011745|gb|EGI53822.1| peptide chain release factor 1 [Sphingomonas sp. S17] Length = 357 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 111/345 (32%), Positives = 169/345 (48%), Gaps = 12/345 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L L + + +E L+ + E++ + L + Sbjct: 9 IAQIEARRDELQAMMATGDLPSD--RFVAVSKEYAELEPVANAAAEVRRLRQEADSLTFM 66 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYLEVHAGAGGTESQD 132 + DD + + L AD A LE+ AG GG E+ Sbjct: 67 TQDGDDELRELAAEELHANRTALAAADRHLALALLPRDAADERAAMLEIRAGTGGDEAAL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY R+AE++ ++ E + + G K + G + LK E GVHR+ R Sbjct: 127 FAGDLFRMYQRYAERQGWRVEVISASIPDTGGYKEVVASVAGAGVFAKLKFESGVHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS +++ V P + ++++I + D RID YR+SGAGGQHVNTTDSA+RI Sbjct: 187 VPVTESGGRIHTSAATVAVLP-EAEEVDLQIDDKDLRIDIYRSSGAGGQHVNTTDSAIRI 245 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV Q ERSQHKN+A+A +LR +LYE E ++ + ++ +G G Sbjct: 246 THIPTGLVVIQQDERSQHKNRAKAMKVLRTRLYEAERERLAAER--AGTRRSMVGSGDRS 303 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P V D R N+ ++L+G+LD+ + A LA Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTLHRLPEILEGELDELIGALLAED 347 >gi|328952115|ref|YP_004369449.1| Peptide chain release factor 1 [Desulfobacca acetoxidans DSM 11109] gi|328452439|gb|AEB08268.1| Peptide chain release factor 1 [Desulfobacca acetoxidans DSM 11109] Length = 357 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 116/347 (33%), Positives = 182/347 (52%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L + +P +N + RE L I ++ Q + L Sbjct: 6 LHAIENRYLELEARLSEPETIKNQELYQQYAREHAELSPLIQIFRQHQQVERECDNNQAL 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D I + + +Q++K +E+ + F L D+ + LE+ AG GG E+ Sbjct: 66 LKTETDEEIKELAREEIQQLKERLEHLENELRFLLLPKDPNDAKNILLEIRAGTGGEEAA 125 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYTR+AE+ +K E L + G+K LI G Y LK E GVHR+ Sbjct: 126 LFAAELFRMYTRFAEQHGWKVEILSHNPTGIGGLKEIIALISGQQVYSLLKYESGVHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS ++ + P + ++++IS + RID +R+SG GGQ VNTTDSAVR Sbjct: 186 RVPTTESQGRIHTSAVTVAILP-EAEDVDVQISPEELRIDVFRSSGPGGQSVNTTDSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV CQ E+SQHKNKA+A +L+A+L ++ +++E+ + + K+++G G Sbjct: 245 ITHLPTGMVVTCQDEKSQHKNKAKALKVLQARLLDI--KQQEQHQKMAQDRKSQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + L+G LD+ + A ++ + Sbjct: 303 SERIRTYNF-PQGRVTDHRLGLTLYRLEAFLEGGLDELLDALVSYYR 348 >gi|261323819|ref|ZP_05963016.1| peptide chain release factor 1 [Brucella neotomae 5K33] gi|261299799|gb|EEY03296.1| peptide chain release factor 1 [Brucella neotomae 5K33] Length = 372 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 115/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R S + ++ + P + L E L + + I+E+ D + + + Sbjct: 23 DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDVAAM 78 Query: 76 ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + ++ + + + Q L AD +A LE+ AG GG E+ Sbjct: 79 RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 138 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A ++ ++ E + +G+ G K + G + LK E GVHR+ Sbjct: 139 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 198 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + I+IEI D RIDT RASGAGGQHVNTTDSAV Sbjct: 199 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 257 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG++V Q E+SQH+N+A+A +LRA+LY++E QK + ++ ++++G G Sbjct: 258 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 314 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V++GDLD+ + A ++ + Sbjct: 315 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQ 361 >gi|325283910|ref|YP_004256451.1| Peptide chain release factor 2 [Deinococcus proteolyticus MRP] gi|324315719|gb|ADY26834.1| Peptide chain release factor 2 [Deinococcus proteolyticus MRP] Length = 365 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 133/335 (39%), Positives = 199/335 (59%), Gaps = 5/335 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L +L L D +RL+ L+ DP LW + A+ + +E + + + Sbjct: 3 ELQEKLASLREYLDIPGKERRLNELDHFLADPELWNDQNRARSITQEATSVRGVVEKYQG 62 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L +LELA ED+ + I+ V+ E+L + + A + V Sbjct: 63 LKSDLDGLAEMLELAESEDERE---MLLEEQGGIEQRVDELYRETLFTMKHADTPAIIRV 119 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 GAGGTE+QDWA ML RMY RWAE+R ++ + L+ G++AG +S +I+G AYG + Sbjct: 120 KGGAGGTEAQDWAGMLARMYMRWAERRGYRVDILDEQPGDQAGYQSIEFIIRGEKAYGMM 179 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGG 240 E GVHRLVR+SP+DSN+RR TSF+S+ V P ++ I+I I +SD R D +R+ G+GG Sbjct: 180 SAEHGVHRLVRVSPFDSNNRRQTSFASVDVVPEVPEEEIDIHIPDSDLRRDVFRSQGSGG 239 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTTDSAVR+TH+PTG+ V CQ RSQ KN A +L+ +LY++E++KREE A Sbjct: 240 QGVNTTDSAVRLTHLPTGIAVACQITRSQIKNHELALQILKQRLYDIEMRKREEEALAAR 299 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 ++ + WG Q+RSYVL +KD R+ + + +P Sbjct: 300 GQQSSVEWGSQMRSYVLDKQ-YIKDHRSGLMQHNP 333 >gi|221195206|ref|ZP_03568262.1| peptide chain release factor 1 [Atopobium rimae ATCC 49626] gi|221185109|gb|EEE17500.1| peptide chain release factor 1 [Atopobium rimae ATCC 49626] Length = 355 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 111/349 (31%), Positives = 169/349 (48%), Gaps = 15/349 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + + L K DP + + E + +E + + D L D EL Sbjct: 5 LEKILSAYADLEKKLADPAVVSDPKEYARIAKEHADQAELVELSRSYIDALDDIEAAKEL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 D + ++ + ++ + + + D D +E+ AG GG E+ Sbjct: 65 LSGSSDAEEKEMLQADISENEAKLPELEDEIKIKLIPGDPNDEKDTIVEIRAGVGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L +MY R+AE R +K + L E G K+ + G Y +K E GVHR+ Sbjct: 125 IFAGDLFKMYERFAESRGWKVQVLSSSPSEAGGFKTIEFKVTGEKVYSVMKFESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R TS +++ V P D I+I+I++ D RIDTY ASG GGQ VNTT SAVR Sbjct: 185 RVPKTESQGRIQTSTATVAVLP-EADDIDIQINQEDLRIDTYCASGPGGQGVNTTYSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---W 308 ITH+PT VVQ Q +RSQ +N+ MLRA+LYE EL++++ G ++IG Sbjct: 244 ITHLPTNTVVQSQDQRSQIQNREVCMQMLRARLYEQELERQQAEQ--GADRLSQIGHGAR 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIE-KTSPSDVLDGD-LDDFMKATLAIKK 355 +IR+Y QP V D R + VL GD L +++ A ++ Sbjct: 302 SEKIRTYN-QPQDRVTDHRIGFNGTYN--GVLLGDTLPSVIESLAAAER 347 >gi|167470509|ref|ZP_02335213.1| peptide chain release factor 2 [Yersinia pestis FV-1] Length = 248 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 154/247 (62%), Positives = 188/247 (76%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SGE D + YL++ AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E DG+ AG+K Sbjct: 1 MFSGEYDRANCYLDLQAGSGGTEAQDWASMLLRMYLRWAESRGFKTEIIEESDGDVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ I G A+GWL+ E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ + Sbjct: 61 SATVKIIGEYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA L+AKLYE Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 E+QK+ + E +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F Sbjct: 181 FEMQKKNADKQVLEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKF 239 Query: 347 MKATLAI 353 ++A+L Sbjct: 240 IEASLKA 246 >gi|298208407|ref|YP_003716586.1| putative peptide chain release factor [Croceibacter atlanticus HTCC2559] gi|83848330|gb|EAP86199.1| putative peptide chain release factor [Croceibacter atlanticus HTCC2559] Length = 316 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 139/308 (45%), Positives = 205/308 (66%), Gaps = 2/308 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+E + ++ + D ++ E E + + K +E +F+ Sbjct: 1 MKELNVKKTWVEDYEQAITFVEDLEVIFEFYKEGEAEETNVKERYAKA--KDLIEDLEFK 58 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++LS E D A L++ AGAGGTES DWA ML+RMY WAEKR FK + L + +G+ AGI Sbjct: 59 NMLSEEGDDLSAVLQITAGAGGTESCDWAEMLMRMYLMWAEKRGFKIKELNLQNGDVAGI 118 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ +L I+G A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+ DDSIEI+I+ Sbjct: 119 KTVSLEIEGNFAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDSIEIDINP 178 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D D R+SGAGGQ+VN ++ +TH P+G+V+ + RSQ +N+ +A ML+++LY Sbjct: 179 ADISWDFARSSGAGGQNVNKVETKAILTHHPSGIVIHNSETRSQLENREKAMQMLKSQLY 238 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+K++ + ESSK +I WG QIR+YV+ PY++VKD+RT E + V++GD+D Sbjct: 239 EIELRKQQAQRDEIESSKMKIEWGSQIRNYVMHPYKLVKDVRTAHETGNVDAVMNGDIDA 298 Query: 346 FMKATLAI 353 F+KA L Sbjct: 299 FLKAFLMA 306 >gi|325956455|ref|YP_004291867.1| peptide chain release factor 1 [Lactobacillus acidophilus 30SC] gi|325333020|gb|ADZ06928.1| peptide chain release factor 1 [Lactobacillus acidophilus 30SC] Length = 362 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 101/347 (29%), Positives = 170/347 (48%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V L DP + + + +E L + K+ + + ++ Sbjct: 8 LEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKQDKKELEDNKKI 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D +++ + I+ E+ + L D D +E+H AGG E+ Sbjct: 68 IANESDEDLIEMAKEENSEIEKEIPELEDQIKILMLPKDPNDDKDIIMEIHGAAGGDEAS 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY ++AE++ +K ++ E G K ++I G Y LK E G HR+ Sbjct: 128 LFAGDLLRMYEKYAERQGWKVSLIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ V P + ++I+I D R+D YR+SGAGGQH+N T SAVR Sbjct: 188 RIPVTESQGRVHTSTATVAVMP-EYEQVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q +RSQ +N+ +A +L++++Y+ + + A K +G G Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQ--AKYDAKRKNAVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + V++G+LD+ + A + + Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQ 350 >gi|154483104|ref|ZP_02025552.1| hypothetical protein EUBVEN_00805 [Eubacterium ventriosum ATCC 27560] gi|149735912|gb|EDM51798.1| hypothetical protein EUBVEN_00805 [Eubacterium ventriosum ATCC 27560] Length = 286 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 156/279 (55%), Positives = 202/279 (72%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + EE+D SI++E + E E + E+LLSGE D N+A ++++AGAGGTES DWA Sbjct: 1 MGEEENDASIVEEVEQETKEFIDEFEKTKIETLLSGEYDKNNAIVKINAGAGGTESCDWA 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 +ML RMYTRWAE + +KTE L+ DG+EAGIKS T + G NAYG+LK E+GVHRLVRIS Sbjct: 61 SMLYRMYTRWAESKGYKTEVLDFLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRLVRIS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+++ +R TSF+S V P +++ +++EI++ D RIDTYR+SGAGGQH+N T SAVRITH Sbjct: 121 PFNAAGKRQTSFASCDVMPDIEEDLDVEINDDDIRIDTYRSSGAGGQHINKTSSAVRITH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 PTG+VVQCQ ERSQ +NK +A ML+AKLY L+ Q+ EE + EIGWG QIRS Sbjct: 181 NPTGIVVQCQNERSQLQNKDKAMKMLKAKLYVLKKQEEEEKRSGIRGEIKEIGWGSQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 YV+QPY MVKD RTN E T V+DG +D F+ A L Sbjct: 241 YVMQPYTMVKDHRTNQEITDVGKVMDGYIDPFINAYLKW 279 >gi|296271838|ref|YP_003654469.1| peptide chain release factor 1 [Arcobacter nitrofigilis DSM 7299] gi|296096013|gb|ADG91963.1| peptide chain release factor 1 [Arcobacter nitrofigilis DSM 7299] Length = 355 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 111/337 (32%), Positives = 176/337 (52%), Gaps = 9/337 (2%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 + R +N P + ++ L +E+ ++ ++ KE L D L + Sbjct: 10 IDRYEEINGLLASPDISSDIKRMTTLSKEQSAIEPIVNKAKEYISVLNDIQDNKLLYDDP 69 Query: 80 DDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 + + +E +L+ K E + + D+ + ++E+ AGAGG E+ + L Sbjct: 70 ELGELAKEELKDLELRKPTIEEEIKVLMIPKDPNDNKNIFIELRAGAGGDEAGIFVGNLF 129 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 R Y R+AE + +K E + + E G K L KG Y LK E G HR+ R+ +S Sbjct: 130 RAYLRYAELKGWKVEIMNQSENEAGGYKEIVALFKGEQVYSRLKYESGTHRVQRVPATES 189 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R HTS ++ V P D +E+EI D +ID RASG GGQ VNTTDSAVRITHIP+G Sbjct: 190 QGRVHTSAITVAVMP-EVDDVEVEIDPGDLKIDVMRASGNGGQSVNTTDSAVRITHIPSG 248 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSY 315 +VV Q ++SQHKNK +A +L+A+LY++++Q++ + + G S K ++G G +IR+Y Sbjct: 249 LVVTNQDQKSQHKNKDKAMKVLKARLYDIQMQEKMD--SEGASRKEQVGTGDRSGRIRTY 306 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATL 351 P + D R N+ V+ DG D+ + + Sbjct: 307 NY-PQGRISDHRINLTLYRLEAVMNDGVFDEIIDPLI 342 >gi|222823061|ref|YP_002574634.1| peptide chain release factor 1 [Campylobacter lari RM2100] gi|254790870|sp|B9KE98|RF1_CAMLR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|222538282|gb|ACM63383.1| peptide chain release factor 1 [Campylobacter lari RM2100] Length = 355 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 119/339 (35%), Positives = 186/339 (54%), Gaps = 9/339 (2%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 R LNT D ++ ++ + L +E+++L+ + KE L D L + + Sbjct: 12 RFDELNTLLSDVNISNDISKMTALSKEQKNLEPIVEKAKEYLKTLDDIEENKLLLSDPEL 71 Query: 82 CSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 + +E NL+ +K E + L D + +LE+ AG GG E+ + L++ Sbjct: 72 GELAKEELKNLELLKPNLEEELKILLLPKDPNDDKNIFLEIRAGTGGDEASLFVGDLVKA 131 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y R+AE R +K E + +G G K +LIKG AY LK E G HR+ R+ +S Sbjct: 132 YIRYAENRDYKYEIVSSSEGSVGGFKEIIILIKGNGAYSRLKYEGGTHRVQRVPETESQG 191 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS ++ + P D +EI+I+ +D +ID R+SG GGQ VNTTDSAVRITHIPTG+V Sbjct: 192 RVHTSAITVAIMP-EVDDVEIQINPNDLKIDVMRSSGHGGQSVNTTDSAVRITHIPTGIV 250 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317 V Q +SQHKNK A +L+A+L+ E+Q++E +A E+ K+++G G +IR+Y Sbjct: 251 VVNQDGKSQHKNKESAMKVLKARLF--EMQEQERLAKESEARKSQVGSGDRSERIRTYNF 308 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLAIKK 355 P + D R N+ +L+G L D+ ++ +A + Sbjct: 309 -PQNRISDHRINLTLYRLDAILEGGLFDEIVEPLIAYYQ 346 >gi|86149291|ref|ZP_01067522.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni CF93-6] gi|218563201|ref|YP_002344981.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|20139359|sp|Q9PM63|RF1_CAMJE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|85840073|gb|EAQ57331.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni CF93-6] gi|112360908|emb|CAL35709.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284926807|gb|ADC29159.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni IA3902] gi|315927641|gb|EFV06972.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929077|gb|EFV08310.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni 305] Length = 355 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 114/345 (33%), Positives = 178/345 (51%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +R LN+ + ++ + L +E+++L+ + KE L + L Sbjct: 6 LDPFFKRFEELNSLLSSSDILNDISKMTTLSKEQKNLEPIVLKAKEYLKTLDNIEENKAL 65 Query: 76 ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + +E + E + L D + +LE+ AG GG E+ + Sbjct: 66 LNDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGTGGDEASLFV 125 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L++ Y R+AE R +K E + +G G K +L+KG AY LK E G HR+ R+ Sbjct: 126 GDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHRVQRVP 185 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P D IEIEI+ +D ++D R+SG GGQ VNTTDSAVRITH Sbjct: 186 QTESQGRVHTSAITVAVMP-EVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVRITH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV Q +SQHKNK A +L+A+LY E+Q+ E +A E+ K+++G G + Sbjct: 245 IPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQESERLAKESEARKSQVGSGDRSER 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++ DG D+ ++ + + Sbjct: 303 IRTYNF-PQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQ 346 >gi|319901262|ref|YP_004160990.1| bacterial peptide chain release factor 1 (bRF-1) [Bacteroides helcogenes P 36-108] gi|319416293|gb|ADV43404.1| bacterial peptide chain release factor 1 (bRF-1) [Bacteroides helcogenes P 36-108] Length = 370 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 95/354 (26%), Positives = 165/354 (46%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V R ++T DP + + L +E + L + ++ KE L E+ Sbjct: 11 LEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMNARKEYMQVLNGIEEAKEI 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + L + + + + DS +A LE+ G GG E+ Sbjct: 71 ITNEADPEMRDMAREELDLCQARQPELEEQIKLLLVPTDPQDSRNAILEIRGGTGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+++ + + +K E ++G G K + G YG +K E GVHR+ Sbjct: 131 IFAGDLFRMYSKFCDIKGWKLEVSSANEGAAGGFKEIICSVTGDGVYGTMKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +S+ V P ++ + I+E + + DT+R+ GAGGQ+VN +S VR Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKVESGVR 249 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + + ++++C + R Q KNK +A + LR +Y+ E QK I +I K Sbjct: 250 LRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRK 307 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 T + G + IR+Y P + D R N + + +DGD+ D + + + Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360 >gi|119470492|ref|ZP_01613195.1| peptide chain release factor 2 (RF-2) [Alteromonadales bacterium TW-7] gi|119446193|gb|EAW27470.1| peptide chain release factor 2 (RF-2) [Alteromonadales bacterium TW-7] Length = 283 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 163/281 (58%), Positives = 208/281 (74%), Gaps = 1/281 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 +LELA+E +D E + L+ + ++E +F + SG D+NDAYL++ +G+GGTE+Q Sbjct: 1 MLELAIEAEDKDTFDEANAELEGLNEQLESLEFRRMFSGTHDANDAYLDLQSGSGGTEAQ 60 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DW NMLLRMY RW E + FK E +E DG+ AGIK AT+ G AYGWL+ E GVHRLV Sbjct: 61 DWCNMLLRMYLRWGEAKGFKVELVEATDGDVAGIKGATVRFVGEYAYGWLRTETGVHRLV 120 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS+ RRHTSF+S +VYP +DD+IEI+I+ SD RID YRASGAGGQHVNTT+SAVR Sbjct: 121 RKSPFDSSGRRHTSFASAFVYPEIDDNIEIDINPSDLRIDVYRASGAGGQHVNTTESAVR 180 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+PT VVQCQ ERSQHKNKAQA L+AKL+ELELQ++ E +K++IGWG Q Sbjct: 181 ITHVPTNTVVQCQNERSQHKNKAQAMKQLKAKLFELELQQQNAEKQTQEDAKSDIGWGSQ 240 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IRSYVL +KDLRT +E + VLDG+LD F++A+L Sbjct: 241 IRSYVLDD-SRIKDLRTGVENRNTQSVLDGNLDKFIEASLK 280 >gi|319795450|ref|YP_004157090.1| peptide chain release factor 1 [Variovorax paradoxus EPS] gi|315597913|gb|ADU38979.1| peptide chain release factor 1 [Variovorax paradoxus EPS] Length = 362 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 115/343 (33%), Positives = 177/343 (51%), Gaps = 7/343 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + VQRL L+ + ++ + + + RE + + + R D E+ Sbjct: 9 LERYVQRLGELDFLLSREDIMSDMAQYRTISREHAEITQIAGRYERYRQREADIAGAKEM 68 Query: 76 ALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + +E + E Q L D+ +A++E+ AG GG ES +A Sbjct: 69 LDDPDMAEMAREEIAGAEAELVQLEEELQRLLLPKDPDDARNAFMEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+ E+ + E + E G K + I G +G L+ E G HR+ R+ Sbjct: 129 GDLLRMYTRYCERAGLRCEIVSESASELGGYKEVVIRIVGDEVFGKLRFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V D+++ ++I+ +D RIDTYRASGAGGQH+N TDSAVRITH Sbjct: 189 ATETQGRIHTSACTVAVLAEPDETVAVQINPADLRIDTYRASGAGGQHINKTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+V +CQ +RSQH+NKA+A +L A++ E + E A K IG G + Sbjct: 249 IPTGIVAECQDDRSQHRNKAKALQVLSARI--QEKDRSERAAKDAAMRKGLIGSGDRSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P + D R N+ +++GDL D ++A A + Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYKLLAIMEGDLGDVLEALRAAR 348 >gi|88860263|ref|ZP_01134901.1| peptide chain release factor 2 (RF-2) [Pseudoalteromonas tunicata D2] gi|88817461|gb|EAR27278.1| peptide chain release factor 2 (RF-2) [Pseudoalteromonas tunicata D2] Length = 260 Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats. Identities = 155/258 (60%), Positives = 195/258 (75%), Gaps = 1/258 (0%) Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + ++E +F + SG+ D NDAYL++ +G+GGTE+QDW N+LLRMY RWA+ + FK E Sbjct: 1 MVAKLEKLEFRRMFSGDFDQNDAYLDLQSGSGGTEAQDWCNILLRMYLRWADAKGFKAEL 60 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +E DG+ AGIK AT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSF+S +VYP Sbjct: 61 VEATDGDVAGIKGATVRIVGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFVYPE 120 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +DD+I+I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ ERSQHKNK Sbjct: 121 IDDNIKIDINPADLRIDVYRASGAGGQHVNTTESAVRITHLPTNTVVQCQNERSQHKNKD 180 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 QA L+AKL+ELELQK+ E +K++IGWG QIRSYVL +KDLRT IE + Sbjct: 181 QAMKQLKAKLFELELQKQNAEKQTQEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGIENRN 239 Query: 335 PSDVLDGDLDDFMKATLA 352 VLDGDLD F++A+L Sbjct: 240 TQAVLDGDLDKFIEASLK 257 >gi|288905236|ref|YP_003430458.1| peptide chain release factor 1 [Streptococcus gallolyticus UCN34] gi|306831307|ref|ZP_07464467.1| peptide chain release factor RF1 [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325978212|ref|YP_004287928.1| peptide chain release factor 1 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288731962|emb|CBI13527.1| peptide chain release factor 1 [Streptococcus gallolyticus UCN34] gi|304426543|gb|EFM29655.1| peptide chain release factor RF1 [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178140|emb|CBZ48184.1| Peptide chain release factor 1 [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 359 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 99/348 (28%), Positives = 163/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E ++ +E + L + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMALSKEEASTRETVTVYREYKQILQNIEDAEEM 66 Query: 76 ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + L+E + + + E + L D + LE+ AGG E+ Sbjct: 67 IKDAGGDPELEEMAKEELKDSKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL+MY ++AE + +K + +E GIK +++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLQMYQKYAESQGWKFDVMEASYNGVGGIKEVVVMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E EI D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+ HIPTG+ V+ Q+ER+Q KN+ +A ++RA++ + Q + + K+ IG G Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQNEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVIDALILFDQ 350 >gi|237740205|ref|ZP_04570686.1| bacterial Peptide Chain Release Factor 2 [Fusobacterium sp. 2_1_31] gi|262068161|ref|ZP_06027773.1| peptide chain release factor 2 [Fusobacterium periodonticum ATCC 33693] gi|294782698|ref|ZP_06748024.1| peptide chain release factor 2 [Fusobacterium sp. 1_1_41FAA] gi|229422222|gb|EEO37269.1| bacterial Peptide Chain Release Factor 2 [Fusobacterium sp. 2_1_31] gi|291378140|gb|EFE85658.1| peptide chain release factor 2 [Fusobacterium periodonticum ATCC 33693] gi|294481339|gb|EFG29114.1| peptide chain release factor 2 [Fusobacterium sp. 1_1_41FAA] Length = 308 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 151/303 (49%), Positives = 208/303 (68%), Gaps = 1/303 (0%) Query: 53 DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112 N +S +++ + D +L++ + + + +K ++E + LL GE Sbjct: 5 KNIVSRYEKLATEVEDEEVLIDFVESGESSFENELIE-KHKTLKYDIEEFEVNLLLDGEY 63 Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D N+A + +H+GAGGTE+ DWA+ML RMY RW + +K L+ +G+ G+KS T L+ Sbjct: 64 DMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKNYKVSELDFMEGDSVGVKSVTFLV 123 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G NAYG+LK E+GVHRLVRISP+D+N +RHTSF+S+ V P VDD++E+EI+ +D RIDT Sbjct: 124 EGINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDDNVEVEINPADIRIDT 183 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQHVN TDSAVRITH PTGVVV CQ+ERSQ N+ A ML++KL E+EL+K+ Sbjct: 184 YRASGAGGQHVNMTDSAVRITHFPTGVVVTCQKERSQLSNRETAMKMLKSKLLEIELKKK 243 Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 EE + +T+IGWG QIRSYV QPY +VKD RTN E + V+DG +DDF+ + L Sbjct: 244 EEEMKKIQGEQTDIGWGNQIRSYVFQPYALVKDHRTNTEIGNVKAVMDGSIDDFINSYLR 303 Query: 353 IKK 355 K Sbjct: 304 WIK 306 >gi|146300064|ref|YP_001194655.1| peptide chain release factor 1 [Flavobacterium johnsoniae UW101] gi|189039972|sp|A5FHI8|RF1_FLAJO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|146154482|gb|ABQ05336.1| bacterial peptide chain release factor 1 (bRF-1) [Flavobacterium johnsoniae UW101] Length = 358 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 101/346 (29%), Positives = 173/346 (50%), Gaps = 12/346 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D QR ++ P + + K L +E + + + +E L + Sbjct: 1 MLDRLQYVKQRFDEISDLIIQPDVISDQKRYKSLNQEYKGIKALVEKREEYIIVLANIDE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAGG 127 E+ + D +++ L K + + E D+ + +E+ AG GG Sbjct: 61 ANEIIADGSDAEMVEMAKMQLDEAKDRLPELEEEIKFMLIPKDPEDAKNVMVEIRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYT++ E ++T +++++G G K + G + YG LK E GV Sbjct: 121 DEASIFAGDLFRMYTKYCETMGWRTSVVDMNEGTSGGFKEVIFEVTGEDVYGTLKFEAGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS +++ V P ++ + +D R+D + +SG GGQ VNTT Sbjct: 181 HRVQRVPQTETQGRVHTSAATVMVLPEAEEFDVQ-VDMNDVRVDFFCSSGPGGQSVNTTK 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V QCQ E+SQHKNK +A +LR++LYE+EL K++E + +++ Sbjct: 240 SAVRLTHIPTGLVAQCQDEKSQHKNKDKALMVLRSRLYEMELAKKQEE--DAKKRSSQVS 297 Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G + IR+Y V D R + ++++GD+ + Sbjct: 298 SGDRSAKIRTYNYA-QGRVTDHRVGLTLYDLGNIMNGDIQKIVSEL 342 >gi|19704676|ref|NP_604238.1| peptide chain release factor 2 [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296328111|ref|ZP_06870644.1| peptide chain release factor RF2 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|19714986|gb|AAL95537.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296154782|gb|EFG95566.1| peptide chain release factor RF2 [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 308 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 147/303 (48%), Positives = 208/303 (68%), Gaps = 1/303 (0%) Query: 53 DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112 N +S +++ + D +L++ + + + + +K ++E + LL GE Sbjct: 5 KNIVSRYEKLATEIDDEEVLIDFVESGETSFESELSE-KHKNLKTDIEEFEINLLLDGEY 63 Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D N+A + +H+GAGGTE+ DWA+ML RMY RW + +K L+ +G+ G+KS T L+ Sbjct: 64 DMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKGYKVSELDFMEGDSVGVKSVTFLV 123 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G NAYG+LK E+G+HRLVRISP+D+N +RHTSF+S+ V P VD+++E+EI+ D RIDT Sbjct: 124 EGINAYGYLKSEKGIHRLVRISPFDANKKRHTSFASVEVVPEVDENVEVEINPVDIRIDT 183 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQHVN TDSAVRITH P+G+VV CQ+ERSQ N+ A ML++KL ELEL+K+ Sbjct: 184 YRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQLSNRETAMKMLKSKLLELELKKK 243 Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 EE + +++IGWG QIRSYV QPY +VKD RTN E + V+DGD+D F+ + L Sbjct: 244 EEEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDHRTNTEIGNVKAVMDGDIDGFINSYLR 303 Query: 353 IKK 355 K Sbjct: 304 WIK 306 >gi|260171648|ref|ZP_05758060.1| peptide chain release factor 1 [Bacteroides sp. D2] gi|299148543|ref|ZP_07041605.1| peptide chain release factor 1 [Bacteroides sp. 3_1_23] gi|315919960|ref|ZP_07916200.1| peptide chain release factor 1 [Bacteroides sp. D2] gi|298513304|gb|EFI37191.1| peptide chain release factor 1 [Bacteroides sp. 3_1_23] gi|313693835|gb|EFS30670.1| peptide chain release factor 1 [Bacteroides sp. D2] Length = 370 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 102/354 (28%), Positives = 168/354 (47%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V R ++T DP + + L +E + LD+ + KE L + + Sbjct: 11 LDGLVARFEEISTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYIQLLGNIEEAKNI 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAGGTESQ 131 E D + + + + + + + E L DS +A LE+ GAGG E+ Sbjct: 71 LANESDAEMREMAKEEMDNSQERLPVLEEEIKLMLVPADPQDSKNAILEIRGGAGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY ++ E + +K E ++G G K + G N YG LK E GVHR+ Sbjct: 131 IFAGDLFRMYAKFCETKGWKMEVSNANEGTAGGFKEVVCSVTGDNVYGILKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +S+ V P ++ + I+E + + DT+R+ GAGGQ+VN +S VR Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKVESGVR 249 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + +I ++++C + R Q KNK +A LR +Y+ E QK I +I K Sbjct: 250 LRYIWKNPNTGIAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIASKRK 307 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 T + G + IR+Y P + D R N + + +DGD+ D + + + Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360 >gi|34762942|ref|ZP_00143922.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887403|gb|EAA24493.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 308 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 148/303 (48%), Positives = 208/303 (68%), Gaps = 1/303 (0%) Query: 53 DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112 N +S +++ + D +L++ + + + +K ++E + LL GE Sbjct: 5 KNIVSRYEKLATEIDDEEVLIDFVESGEASFENE-LQTKHKILKSDIEEFEINLLLDGEY 63 Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D N+A + +H+GAGGTE+ DWA+ML RMY RW + +K L+ +G+ GIKS T L+ Sbjct: 64 DINNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKGYKVSELDFMEGDSVGIKSVTFLV 123 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G NAYG+LK E+GVHRLVRISP+D+N +RHTSF+S+ V P VD+++E+EI+ +D RIDT Sbjct: 124 EGINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDENVEVEINPADIRIDT 183 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQHVN TDSAVRITH P+G+VV CQ+ERSQ N+ A ML++KL ELE++K+ Sbjct: 184 YRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQLSNRETAMKMLKSKLLELEIKKK 243 Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 EE + +++IGWG QIRSYV QPY +VKD RTN E + V+DG +DDF+ + L Sbjct: 244 EEEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDHRTNTEIGNVKAVMDGSIDDFINSYLR 303 Query: 353 IKK 355 K Sbjct: 304 WIK 306 >gi|256059849|ref|ZP_05450036.1| peptide chain release factor 1 [Brucella neotomae 5K33] Length = 359 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 115/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R S + ++ + P + L E L + + I+E+ D + + + Sbjct: 10 DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDVAAM 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + ++ + + + Q L AD +A LE+ AG GG E+ Sbjct: 66 RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A ++ ++ E + +G+ G K + G + LK E GVHR+ Sbjct: 126 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + I+IEI D RIDT RASGAGGQHVNTTDSAV Sbjct: 186 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG++V Q E+SQH+N+A+A +LRA+LY++E QK + ++ ++++G G Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V++GDLD+ + A ++ + Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQ 348 >gi|329113396|ref|ZP_08242177.1| Peptide chain release factor 1 [Acetobacter pomorum DM001] gi|326697221|gb|EGE48881.1| Peptide chain release factor 1 [Acetobacter pomorum DM001] Length = 352 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 108/348 (31%), Positives = 177/348 (50%), Gaps = 13/348 (3%) Query: 14 FD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 FD D V R L + N RE ++ ++ I ++ Sbjct: 3 FDERLDQIVSRALELEAQLASG---LNGEAFTQASREYAEIEPVVARINALRGVEDGIRQ 59 Query: 72 LLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L + + + + L+ + + + L AD+ A LEV AGG E+ Sbjct: 60 AELLLADPEMKELAEAELTELREQLPQLQKDVRLSLLPKDVADARSAILEVRPAAGGDEA 119 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L MY R+A+ ++ ++ + E G++ I G + LK E GVHR+ Sbjct: 120 ALFAAELFDMYRRYADLNGWRFTVMDYDESELGGLREGIAEINGKGVFARLKYESGVHRV 179 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS ++ V P + +++E++E+D R+D +RASGAGGQHVN T+SAV Sbjct: 180 QRVPATESQGRIHTSTVTVAVLP-EAEDVDVEVNETDLRVDVFRASGAGGQHVNKTESAV 238 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+TH+P+G+VV Q+E+SQHKN+A+A +LRA+LY E ++ + AN ++++G G Sbjct: 239 RLTHMPSGIVVSMQEEKSQHKNRAKAMKILRARLY--ERERAQAHANRAADRRSQVGTGD 296 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+ G+LD+F+ A ++ Sbjct: 297 RSERIRTYNF-PQGRVTDHRINLTLYKIDRVMLGELDEFVDALTQEEQ 343 >gi|329888688|ref|ZP_08267286.1| peptide chain release factor 1 [Brevundimonas diminuta ATCC 11568] gi|328847244|gb|EGF96806.1| peptide chain release factor 1 [Brevundimonas diminuta ATCC 11568] Length = 345 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 110/341 (32%), Positives = 172/341 (50%), Gaps = 12/341 (3%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + R + + + E L +E L ++ + + L +A + Sbjct: 1 MLDRFHQVEARMGAAT---DGAEIVRLSKEHAELKPVADAVQALARARAEADDLKAMAAD 57 Query: 79 EDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 + ++ + D L ++ A LEV AG GG E+ +A L Sbjct: 58 PEMAALASDELDALTERLPTLEREVALLLAPRDADENASAVLEVRAGTGGDEAALFAGDL 117 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY+R+A+ R ++ E +G+ G K + G +G LK E GVHR+ R+ + Sbjct: 118 FRMYSRYAQSRGWRVEIDSAAEGDAGGFKEIIATVSGEGVFGRLKFESGVHRVQRVPTTE 177 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 + R HTS ++I V P + +EIEI + D RIDTYR+SGAGGQHVN TDSAVRITH+PT Sbjct: 178 AGGRIHTSAATIAVLP-EVEDVEIEILDKDIRIDTYRSSGAGGQHVNKTDSAVRITHLPT 236 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314 G+V E+SQH N+ +A LR +LY+ +Q++ + A ++ K+++G G +IR+ Sbjct: 237 GIVATSS-EKSQHVNRDKAMKNLRVRLYD--MQRQAKDAARSDARKSQVGSGDRSERIRT 293 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 Y P V D R + S +L+GDLD + A +A + Sbjct: 294 YNF-PQGRVTDHRIGLTLHSLPQILEGDLDPMLNALIAEDQ 333 >gi|254476963|ref|ZP_05090349.1| peptide chain release factor 1 [Ruegeria sp. R11] gi|214031206|gb|EEB72041.1| peptide chain release factor 1 [Ruegeria sp. R11] Length = 351 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 116/344 (33%), Positives = 175/344 (50%), Gaps = 12/344 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +QR +L D +++ L +E L I + L D ++ Sbjct: 7 LEQILQRFQYLEAAMSDGASGEDIA---ALAKEYSDLRPVAEQIISYRRLLADLDEAEQM 63 Query: 76 ALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D ++ +E + + Q L ADS A LE+ G GG E+ +A Sbjct: 64 LADPDMAALAEEELPGLRAALPEAEQALQLALLPRDAADSKPAMLEIRPGTGGDEAALFA 123 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE + + E +E E G+K +KG N + LK E GVHR+ R+ Sbjct: 124 GDLLRMYQRYAEAQGWTFEIIEEQSTELGGLKEVVAHVKGNNVFARLKYESGVHRVQRVP 183 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P + +++ I +D RIDT RASGAGGQHVNTTDSAVRITH Sbjct: 184 VTESGGRIHTSAATVAVLP-EAEEVDLRIDPADLRIDTMRASGAGGQHVNTTDSAVRITH 242 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG++V E+SQH+N+ A +LR +LY+LE Q+ + +++G G + Sbjct: 243 IPTGIIV-VSSEKSQHRNREIAMQVLRTRLYDLERQRIDSER--SADRASQVGSGDRSER 299 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++ GDLD+ + A A + Sbjct: 300 IRTYNF-PQGRMSDHRINLTLYKLDQIMQGDLDEIIDALTADDQ 342 >gi|218960517|ref|YP_001740292.1| peptide chain release factor RF-1 [Candidatus Cloacamonas acidaminovorans] gi|167729174|emb|CAO80085.1| peptide chain release factor RF-1 [Candidatus Cloacamonas acidaminovorans] Length = 355 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 113/347 (32%), Positives = 188/347 (54%), Gaps = 12/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 L + + DP + + + + +R + L + K Q + L Sbjct: 7 LQILENELKEMQEQISDPAVINDAQKYRDCLRRFKELREINAAWKHYQTLKKHIEEVNAL 66 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 E+D +L D + ++ ++E + + + D+ +A +E+ AG GG E+ Sbjct: 67 EKTENDPEMLDLIKDEERSLQQQLEQTELKLKDLLIPADPNDAKNAIVEIRAGTGGEEAA 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+ +AE + +K E + ++ E G K + G + Y +++ E GVHR+ Sbjct: 127 LFAADLFRMYSYYAEMKGWKLEVISMNQTELGGYKEIIFQLSGKDVYSYMRFESGVHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S+ R HTS ++ V P + I+I+I ESD RID YR++G GGQ VNTTDSAVR Sbjct: 187 RIPVTESSGRIHTSAVTVAVLP-EAEDIDIDIQESDLRIDVYRSTGHGGQSVNTTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+PTG+VV CQ E+SQ KNKA+A +LR++L + E+ ++E+ I ++ K ++ G + Sbjct: 246 ITHLPTGIVVTCQDEKSQIKNKAKALKVLRSRLLDEEISRQEQE--IAKARKAQVSTGDR 303 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT-LAIK 354 IR+Y P V D R N+ + L G++++F++A LA + Sbjct: 304 SAKIRTYNF-PQSRVTDHRINLTSYNLDSFLAGNIEEFIQALRLAWR 349 >gi|42518855|ref|NP_964785.1| peptide chain release factor 1 [Lactobacillus johnsonii NCC 533] gi|227889713|ref|ZP_04007518.1| peptide chain release factor 1 [Lactobacillus johnsonii ATCC 33200] gi|268319749|ref|YP_003293405.1| Peptide chain release factor 1 (RF-1) [Lactobacillus johnsonii FI9785] gi|61214647|sp|Q74K25|RF1_LACJO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|41583141|gb|AAS08751.1| peptide chain release factor 1 [Lactobacillus johnsonii NCC 533] gi|227849577|gb|EEJ59663.1| peptide chain release factor 1 [Lactobacillus johnsonii ATCC 33200] gi|262398124|emb|CAX67138.1| Peptide chain release factor 1 (RF-1) [Lactobacillus johnsonii FI9785] gi|329667598|gb|AEB93546.1| peptide chain release factor 1 [Lactobacillus johnsonii DPC 6026] Length = 362 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 95/342 (27%), Positives = 166/342 (48%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V L DP + + + +E + + ++ + + + E+ Sbjct: 8 LEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADMREVVQKYRKYKSDIKEIDDNKEI 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D +++ + ++ EV + L D D +E+ AGG E+ Sbjct: 68 ISTESDNDLVEMAKEENSELEKEVAELEDEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY ++AE + +K ++ E G K ++I G Y LK E G HR+ Sbjct: 128 LFAGDLLRMYEKYAETQGWKVSLIDSEPTEVGGYKRVAVMITGDKVYSKLKYENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + ++I++ D R+D YR+SGAGGQH+N T SAVR Sbjct: 188 RVPVTESQGRVHTSTATVAVMP-EYEQVDIDLDPKDIRVDVYRSSGAGGQHINKTSSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q +RSQ +N+ +A +L++++Y+ + + K +G G Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNRD--QYDAKRKESVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R + +++G+LD+ + A Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIINAL 345 >gi|315038002|ref|YP_004031570.1| peptide chain release factor 1 [Lactobacillus amylovorus GRL 1112] gi|312276135|gb|ADQ58775.1| peptide chain release factor 1 [Lactobacillus amylovorus GRL 1112] gi|327183282|gb|AEA31729.1| peptide chain release factor 1 [Lactobacillus amylovorus GRL 1118] Length = 362 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 100/347 (28%), Positives = 169/347 (48%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V L DP + + + +E L + K+ + + ++ Sbjct: 8 LEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKQDKKELEDNKKI 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D +++ + I+ E+ + L D D +E+ AGG E+ Sbjct: 68 IANESDEDLIEMAKEENSEIEKEIPELEDQIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY ++AE++ +K ++ E G K ++I G Y LK E G HR+ Sbjct: 128 LFAGDLLRMYEKYAERQGWKVSLIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ V P + ++I+I D R+D YR+SGAGGQH+N T SAVR Sbjct: 188 RIPVTESQGRVHTSTATVAVMP-EYEQVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q +RSQ +N+ +A +L++++Y+ + + A K +G G Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQ--AKYDAKRKNAVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + V++G+LD+ + A + + Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQ 350 >gi|317061399|ref|ZP_07925884.1| peptide chain release factor 2 [Fusobacterium sp. D12] gi|313687075|gb|EFS23910.1| peptide chain release factor 2 [Fusobacterium sp. D12] Length = 331 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 155/329 (47%), Positives = 218/329 (66%), Gaps = 1/329 (0%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 +T + W + + L++ ++ + + + + + +L+E D+ S Sbjct: 2 EARTMEEGFWNDKKSSSALIKAMNEEKALLASFQSLVEEIEEEEVLIEFVEAGDE-SSQV 60 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E + +++ ++E LL GE D N+A + +H+GAGGTE+ DWA+ML RMYTRW Sbjct: 61 ELEEKHKQLLKDMESFSTGLLLDGEYDGNNAIVTIHSGAGGTEACDWADMLYRMYTRWCH 120 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 +K+K E ++ G+ GIKS T L+ G +AYG+LK E+G+HRLVRISP+D+N +RHTSF Sbjct: 121 DKKYKIEEMDFMPGDSVGIKSITFLVSGYHAYGYLKCEKGIHRLVRISPFDANKKRHTSF 180 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S+ V P VD+S+E+E+ +D RIDTYRASGAGGQH+N TDSAVRITH PTG+VV CQ+E Sbjct: 181 ASVEVVPEVDESVEVEVEAADIRIDTYRASGAGGQHINMTDSAVRITHFPTGIVVTCQKE 240 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQ N+ A ML++KL ELEL+K+EE + ++EIGWG QIRSYV QPY MVKD Sbjct: 241 RSQLNNRETAMKMLQSKLLELELKKKEEEMKKLQGEQSEIGWGSQIRSYVFQPYTMVKDH 300 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 RT +E + V+DGDLD+FM L K Sbjct: 301 RTGVEVGNIKAVMDGDLDEFMNGYLRWNK 329 >gi|239907246|ref|YP_002953987.1| peptide chain release factor 2 [Desulfovibrio magneticus RS-1] gi|239797112|dbj|BAH76101.1| peptide chain release factor 2 [Desulfovibrio magneticus RS-1] Length = 285 Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats. Identities = 137/247 (55%), Positives = 179/247 (72%) Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + G D+ DA LE+H GAGGTE+QDWA MLLRMY RWAE+++F + L+ G+EAG Sbjct: 30 LAAFFGPEDNADAILEIHPGAGGTEAQDWAEMLLRMYRRWAERKRFDVKMLDFLPGDEAG 89 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 +KS TL I GP AYG L E+G+HRL+RISP+DS+ RRHTSF+S+ VYP I+IE+ Sbjct: 90 VKSVTLQISGPYAYGLLAVEKGIHRLIRISPFDSSGRRHTSFASVDVYPDAGVDIDIEVK 149 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 E D R+D +RASG GGQHVN T SA+RITH+PT +VVQCQ E+SQH+N+ A +L+A+L Sbjct: 150 EDDLRVDVFRASGPGGQHVNKTSSAIRITHLPTNIVVQCQNEKSQHRNRETAMKVLKARL 209 Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 Y+LEL+K E SK IG+G QIR+Y +QPY++VKD RT ++ VLDGDLD Sbjct: 210 YDLELKKLEAEKQESYESKNAIGFGSQIRTYTMQPYRLVKDHRTGVDAGDVEAVLDGDLD 269 Query: 345 DFMKATL 351 F++ L Sbjct: 270 KFIRGFL 276 >gi|317475302|ref|ZP_07934568.1| peptide chain release factor 1 [Bacteroides eggerthii 1_2_48FAA] gi|316908556|gb|EFV30244.1| peptide chain release factor 1 [Bacteroides eggerthii 1_2_48FAA] Length = 370 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 100/354 (28%), Positives = 168/354 (47%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V R ++T DP + + L +E + L + ++ KE L E+ Sbjct: 11 LEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMNARKEYMQVLSGIEEAKEI 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + L + + + + DS +A LE+ GAGG E+ Sbjct: 71 IANETDAEMREMAREELDACQTRQPELEEQIKLLLVPADPQDSRNAILEIRGGAGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYT++ E + +K + ++G G K + G N YG LK E GVHR+ Sbjct: 131 IFAGDLFRMYTKYCETKGWKLDISSANEGAAGGFKEIICSVTGDNVYGTLKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +S+ V P ++ + I+E + + DT+R+ GAGGQ+VN +S VR Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKVESGVR 249 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + + ++++C + R Q KNK +A + LR +Y+ E QK I +I K Sbjct: 250 LRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRK 307 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 T + G + IR+Y P + D R N + S +DGD+ D + + + Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDGDIQDCIDHLIVAE 360 >gi|160887043|ref|ZP_02068046.1| hypothetical protein BACOVA_05057 [Bacteroides ovatus ATCC 8483] gi|237715527|ref|ZP_04546008.1| peptide chain release factor 1 [Bacteroides sp. D1] gi|262408537|ref|ZP_06085083.1| peptide chain release factor 1 [Bacteroides sp. 2_1_22] gi|293369398|ref|ZP_06615983.1| peptide chain release factor 1 [Bacteroides ovatus SD CMC 3f] gi|294646503|ref|ZP_06724140.1| peptide chain release factor 1 [Bacteroides ovatus SD CC 2a] gi|294807531|ref|ZP_06766328.1| peptide chain release factor 1 [Bacteroides xylanisolvens SD CC 1b] gi|298482182|ref|ZP_07000370.1| peptide chain release factor 1 [Bacteroides sp. D22] gi|156107454|gb|EDO09199.1| hypothetical protein BACOVA_05057 [Bacteroides ovatus ATCC 8483] gi|229444236|gb|EEO50027.1| peptide chain release factor 1 [Bacteroides sp. D1] gi|262353402|gb|EEZ02496.1| peptide chain release factor 1 [Bacteroides sp. 2_1_22] gi|292635565|gb|EFF54072.1| peptide chain release factor 1 [Bacteroides ovatus SD CMC 3f] gi|292638122|gb|EFF56503.1| peptide chain release factor 1 [Bacteroides ovatus SD CC 2a] gi|294445232|gb|EFG13902.1| peptide chain release factor 1 [Bacteroides xylanisolvens SD CC 1b] gi|295086791|emb|CBK68314.1| bacterial peptide chain release factor 1 (bRF-1) [Bacteroides xylanisolvens XB1A] gi|298271739|gb|EFI13312.1| peptide chain release factor 1 [Bacteroides sp. D22] Length = 370 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 102/354 (28%), Positives = 168/354 (47%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V R ++T DP + + L +E + LD+ + KE L + + Sbjct: 11 LDGLVARFEEISTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYIQLLGNIEEAKNI 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAGGTESQ 131 E D + + + + + + + E L DS +A LE+ GAGG E+ Sbjct: 71 LANESDAEMREMAKEEMDNSQERLPVLEEEIKLMLVPADPQDSKNAILEIRGGAGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY ++ E + +K E ++G G K + G N YG LK E GVHR+ Sbjct: 131 IFAGDLFRMYAKFCETKGWKMEVSNANEGTAGGFKEIVCSVTGDNVYGILKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +S+ V P ++ + I+E + + DT+R+ GAGGQ+VN +S VR Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKVESGVR 249 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + +I ++++C + R Q KNK +A LR +Y+ E QK I +I K Sbjct: 250 LRYIWKNPNTGIAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIASKRK 307 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 T + G + IR+Y P + D R N + + +DGD+ D + + + Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360 >gi|265999301|ref|ZP_05465736.2| peptide chain release factor 1 [Brucella melitensis bv. 2 str. 63/9] gi|17982074|gb|AAL51373.1| bacterial peptide chain release factor 1 (rf-1) [Brucella melitensis bv. 1 str. 16M] gi|263093126|gb|EEZ17261.1| peptide chain release factor 1 [Brucella melitensis bv. 2 str. 63/9] gi|326409872|gb|ADZ66937.1| peptide chain release factor 1 [Brucella melitensis M28] gi|326539585|gb|ADZ87800.1| peptide chain release factor 1 [Brucella melitensis M5-90] Length = 377 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 115/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R S + ++ + P + L E L + + I+E+ D + L + Sbjct: 28 DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 83 Query: 76 ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + ++ + + + Q L AD +A LE+ AG GG E+ Sbjct: 84 RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 143 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A ++ ++ E + +G+ G K + G + LK E GVHR+ Sbjct: 144 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 203 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + I+IEI D RIDT RASGAGGQHVNTTDSAV Sbjct: 204 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 262 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG++V Q E+SQH+N+A+A +LRA+LY++E QK + ++ ++++G G Sbjct: 263 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 319 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V++G+LD+ + A ++ + Sbjct: 320 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGELDELVDALISDHQ 366 >gi|15618037|ref|NP_224321.1| peptide chain release factor 1 [Chlamydophila pneumoniae CWL029] gi|15835649|ref|NP_300173.1| peptide chain release factor 1 [Chlamydophila pneumoniae J138] gi|16752931|ref|NP_445202.1| peptide chain release factor 1 [Chlamydophila pneumoniae AR39] gi|33241449|ref|NP_876390.1| peptide chain release factor 1 [Chlamydophila pneumoniae TW-183] gi|6225941|sp|Q9Z968|RF1_CHLPN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|4376376|gb|AAD18266.1| Peptide Chain Releasing Factor [Chlamydophila pneumoniae CWL029] gi|7189573|gb|AAF38472.1| peptide chain release factor 1 [Chlamydophila pneumoniae AR39] gi|8978487|dbj|BAA98324.1| peptide chain releasing factor [Chlamydophila pneumoniae J138] gi|33235957|gb|AAP98047.1| translation releasing factor RF-1 [Chlamydophila pneumoniae TW-183] gi|269302994|gb|ACZ33094.1| peptide chain release factor 1 [Chlamydophila pneumoniae LPCoLN] Length = 357 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 113/337 (33%), Positives = 172/337 (51%), Gaps = 11/337 (3%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQ---HLDNAISFIKEIQDRLCDNLILLELAL 77 RL+ + K +P ++ N E L +E L NA I ++ L D+ L + Sbjct: 10 NRLAEVEIKISNPEIFSNSKEYSALSKEHSYLLELKNAYDKILNLEKVLADDKQALAIEK 69 Query: 78 EEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 + + +L+E + + ++ + + D + +E+ AG GG E+ + Sbjct: 70 DPEMVVMLEEGINENKVELEKLNKILESLLVPPDPDDDLNVIMELRAGTGGEEAALFVGD 129 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 +RMY +A + +K E L + + G K + I G L+ E G HR+ R+ Sbjct: 130 CVRMYHLYASSKGWKYEVLSASESDLKGYKEYVMGISGTGVKRLLQYEAGTHRVQRVPET 189 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIE-ISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 ++ R HTS +I V P + I+E D +IDT+RASGAGGQHVN TDSAVRITH+ Sbjct: 190 ETQGRVHTSAITIAVLPEPSEEDTELLINEKDLKIDTFRASGAGGQHVNVTDSAVRITHL 249 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTGVVV CQ ERSQHKNK +A +L+A++ + E+QKR A+ S ++G G +I Sbjct: 250 PTGVVVTCQDERSQHKNKDKAMRILKARIRDAEMQKRHNEASAMRS--AQVGSGDRSERI 307 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 R+Y V D R + + V++GDLD A Sbjct: 308 RTYNFS-QNRVTDHRIGLTLYNLDKVMEGDLDPITTA 343 >gi|294101724|ref|YP_003553582.1| peptide chain release factor 1 [Aminobacterium colombiense DSM 12261] gi|293616704|gb|ADE56858.1| peptide chain release factor 1 [Aminobacterium colombiense DSM 12261] Length = 358 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 112/346 (32%), Positives = 174/346 (50%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ + L + DP + N+ E + L ++ +++A+ +E + D L Sbjct: 7 LDDLEKTFVDLEKQMSDPVVAANLKEIQQLAKKHAQIESAVLKYREYKKVKSDLEEAHSL 66 Query: 76 ALEEDDCSILQETSDNLQRI---KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 D + ++ + + L D +E+ GAGG E+ Sbjct: 67 LHSGDGDMQELAREEIKEKEPLLECIRDELHVLLLPVDPNDEKSVIMEIRGGAGGEEAAL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+ E+ ++ E ++ ++ G+K I G AY LK E GVHR+ R Sbjct: 127 FSANLYRMYSRFCEREGWRIEIIQSNETGIGGLKEVIFKIDGRGAYSKLKFESGVHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS S++ V P + ++++I D +IDTYR+SGAGGQHVN TDSAVRI Sbjct: 187 VPMTEAGGRIHTSTSTVAVLP-EVEDVDVDIRTEDLKIDTYRSSGAGGQHVNMTDSAVRI 245 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV CQ ERSQ KN+A+A LRAKLY LE ++ E + +IG G Sbjct: 246 THLPTGIVVTCQDERSQIKNRAKAMMYLRAKLYGLEK--EKQAEEQAEERRGQIGSGDRS 303 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + LDGDL + + A + Sbjct: 304 ERIRTYNY-PQNRITDHRIGLTLYKLDQYLDGDLYEMIDAMTMADQ 348 >gi|194335257|ref|YP_002017051.1| peptide chain release factor 1 [Pelodictyon phaeoclathratiforme BU-1] gi|238693362|sp|B4SAR5|RF1_PELPB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|194307734|gb|ACF42434.1| peptide chain release factor 1 [Pelodictyon phaeoclathratiforme BU-1] Length = 357 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 104/352 (29%), Positives = 174/352 (49%), Gaps = 13/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + ++ L DP+ + + + L +E L + + Sbjct: 1 MLDKLQSIKEKHLDLEQLLSDPNAAADQVRFRKLNKEYSDLREIVQAYDLYAATKTELDE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 +L E D + + + ++ ++ + L EADS + +E+ AG GG Sbjct: 61 SRQLLKSESDAEMKELVQAEISELQKKLPELEQQLKILLLPKEEADSRNVIIEIRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNAYGWLKGEQG 186 E+ +A L RMY R+AE + ++ E L ++ G + TL + G + YG +K E G Sbjct: 121 EEAALFAADLTRMYQRYAEHQGWQCETLHFNESSVPGGFREITLSVNGHDVYGTMKYESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ ++ R HTS S+ V P + +++EI D R DTYR+ G GGQ+VN Sbjct: 181 VHRVQRVPDTETQGRIHTSAVSVAVLP-EAEEVDVEIRREDLRFDTYRSGGKGGQNVNKV 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 ++AVRITH+PTG+V CQ++RSQ +NK +A MLR KLY+++L ++++ ++ + Sbjct: 240 ETAVRITHMPTGIVSACQEQRSQLQNKERAMQMLRTKLYDIQLAEQQQQRADL--RRSMV 297 Query: 307 GWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G + IR+Y P V D R + +L GDL D + A + Sbjct: 298 TTGDRSAKIRTYNY-PQSRVTDHRIAFTSHALPQILQGDLQDIINALKMHDQ 348 >gi|255693621|ref|ZP_05417296.1| peptide chain release factor 1 [Bacteroides finegoldii DSM 17565] gi|260620597|gb|EEX43468.1| peptide chain release factor 1 [Bacteroides finegoldii DSM 17565] Length = 370 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 103/354 (29%), Positives = 168/354 (47%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V R ++T DP + + L +E + LD+ + KE L + + Sbjct: 11 LDGLVARFEEISTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYIQLLGNIEEAKNI 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAGGTESQ 131 E D I + + + + + + E L DS +A LE+ GAGG E+ Sbjct: 71 LATESDTDIREMAKEEMDLSQERLPVLEEEIKLMLVPADPQDSKNAILEIRGGAGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY ++ E + +K E ++G G K + G N YG LK E GVHR+ Sbjct: 131 IFAGDLFRMYAKYCEVKGWKLEVSNANEGTAGGYKEIVCSVTGDNVYGTLKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +S+ V P ++ + I+E + + DT+R+ GAGGQ+VN +S VR Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKVESGVR 249 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + +I ++++C + R Q KNK +A LR +Y+ E QK I +I K Sbjct: 250 LRYIWKNPNTGVSEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIASKRK 307 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 T + G + IR+Y P + D R N + + +DGD+ D + + + Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360 >gi|330723258|gb|AEC45628.1| peptide chain release factor 1 [Mycoplasma hyorhinis MCLD] Length = 383 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 111/349 (31%), Positives = 176/349 (50%), Gaps = 6/349 (1%) Query: 11 GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---L 66 + + ++ ++ L+ + DP + N+ E + +E +++ + K + + Sbjct: 25 KSMLNSLNSIKEKYEHLSNQLLDPEIVSNIKEYTKINKELASIEDIVLAFKNYLKQVSII 84 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D+ LL+ E +E + ++I+ + L E D + +E+ AG Sbjct: 85 EDSKKLLQEKDVEIHNLAKEEITLATKKIEEIEKELVVLLLPKDENDDKNVIVEIRGAAG 144 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ + L +MY +WAE +K+ + L G L+ G Y LK E G Sbjct: 145 GDEANIFVGDLYKMYLKWAESKKWSVKVLNSSLASAGGFTQIVFLVSGDKVYSKLKFESG 204 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ RI ++ R HTS +++ + P VDD I+++I D RIDTYR+SGAGGQ VNTT Sbjct: 205 VHRVQRIPETETQGRVHTSTTTVTIMPEVDDDIQVDIKAQDLRIDTYRSSGAGGQSVNTT 264 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIPTG+V Q RSQ NK A +L++K+Y LE++K++ I Sbjct: 265 DSAVRITHIPTGLVSTSQDGRSQIANKELALKILKSKIYNLEVEKKQAIEGQFRKLAGSG 324 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + + +V+ G+LD + A LA K Sbjct: 325 ARSEKIRTYNY-PQDRVTDHRISFSTS-LKNVIVGNLDPIIDALLAEDK 371 >gi|282889838|ref|ZP_06298377.1| hypothetical protein pah_c004o248 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500412|gb|EFB42692.1| hypothetical protein pah_c004o248 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 354 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 108/340 (31%), Positives = 180/340 (52%), Gaps = 10/340 (2%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLE 74 + +L L +P ++Q+ + L +E +L S +++ ++ DN +L Sbjct: 7 KLLSKLPDLEEALGNPEVFQDQKRYRALTQEHAYLSELKSVWEKMVKSNKQIEDNQEMLA 66 Query: 75 LALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 + + ++T + ++ + + D + +E+ AG GG E+ + Sbjct: 67 DEANAELKEVLEEDTRNLRSLVEKLQVDLENLLVPPDPNDHRNTIVELRAGTGGDEAALF 126 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 +RMY +A+ + ++ E L E G K +++ G N Y +L E G HR+ R+ Sbjct: 127 VGDCVRMYKLYADSKGWRYELLSCTPSEMGGFKEYVMVLSGQNVYRFLHYEGGTHRVQRV 186 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 ++ R HTS ++ + D+ E+ I E D R+DTYR+SGAGGQHVNTTDSAVR+T Sbjct: 187 PETEAQGRVHTSAMTVAILLEPDEDTEVVIDEKDLRVDTYRSSGAGGQHVNTTDSAVRLT 246 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H PTG+VV CQ+ERSQHKNK +A +L+AK+ E E +K++E I + ++G G Sbjct: 247 HNPTGIVVYCQEERSQHKNKEKAMRLLKAKIVEAEQRKKQEE--IASNRSQQVGSGDRSE 304 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P + D R N+ + + V++GDLD+ A Sbjct: 305 RIRTYNF-PQNRITDHRINLTRYNLDRVMEGDLDEITLAL 343 >gi|270264900|ref|ZP_06193164.1| peptide chain release factor 2 [Serratia odorifera 4Rx13] gi|270041198|gb|EFA14298.1| peptide chain release factor 2 [Serratia odorifera 4Rx13] Length = 248 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 155/247 (62%), Positives = 192/247 (77%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SGE DS D YL++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E DG+ AG+K Sbjct: 1 MFSGEYDSADCYLDIQAGSGGTEAQDWASMLLRMYLRWAESKGFKTEVIEESDGDVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ I G A+GWL+ E GVHRLVR SP+DS RRHTSFSS+++YP VDD I+I+I+ + Sbjct: 61 SATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDDIDIDINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+ LRAKLYE Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 E+QK+ E +K++IGWG QIRSYVL +KDLRTN+E + VLDGDLD F Sbjct: 181 FEMQKKNADKQQMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTNVETRNTQAVLDGDLDKF 239 Query: 347 MKATLAI 353 ++A+L Sbjct: 240 IEASLKA 246 >gi|239832947|ref|ZP_04681276.1| peptide chain release factor 1 [Ochrobactrum intermedium LMG 3301] gi|239825214|gb|EEQ96782.1| peptide chain release factor 1 [Ochrobactrum intermedium LMG 3301] Length = 357 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 118/348 (33%), Positives = 185/348 (53%), Gaps = 18/348 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R S + ++ + P + L E L + I+E+ D + + L + Sbjct: 10 DQLLKRFSMIESQMANNP----DSETYVKLASEYSELQEVVGKIRELTDARREAVDLAAM 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + ++ + + + Q L AD +A LE+ AG GG E+ Sbjct: 66 RDDAATDAEMRALALEELPEVEKRIGTLEQEVQILLLPKDAADEKNAILEIRAGTGGLEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A ++ ++ E + +G+ G K + G + LK E GVHR+ Sbjct: 126 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + I+IEI D RIDT RASGAGGQHVNTTDSAV Sbjct: 186 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG++V Q E+SQH+N+A+A +LRA+LY++E QK ES ++++G G Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AETERSESRRSQVGSGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V++GDLD+ + A ++ + Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQ 348 >gi|156744082|ref|YP_001434211.1| peptide chain release factor 2 [Roseiflexus castenholzii DSM 13941] gi|156235410|gb|ABU60193.1| peptide chain release factor 2 [Roseiflexus castenholzii DSM 13941] Length = 317 Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats. Identities = 142/310 (45%), Positives = 198/310 (63%), Gaps = 3/310 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ L + I+ + +L L++LA E+D S+ + + L+R + E+E + E Sbjct: 1 MQRLTRLKEEVERIEALDRQLTALADLIDLAAAEEDDSLQADIAAELERTRREIEALEIE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LLSG D DA+L + AG GGT++QDWA MLLRMY RW E+R F+ ++ DGEEAGI Sbjct: 61 VLLSGPYDDRDAFLSIKAGMGGTDAQDWAEMLLRMYMRWGERRGFQVALIDQSDGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ ++GP AYG K E GVHRL+R+SP+++ + R TSF+ + V P VDD+ E+ I Sbjct: 121 KSATIELRGPYAYGSAKAEAGVHRLIRLSPFNAGNTRQTSFAMVEVLPEVDDAPEVVIRP 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIP---TGVVVQCQQERSQHKNKAQAWNMLRA 282 D R+D +RASG GGQ VNTTDSAVRIT+ P +VV CQ ERSQ +N+ A +LR Sbjct: 181 EDIRVDVFRASGHGGQGVNTTDSAVRITYKPGTPEQIVVTCQNERSQLQNRETAMRVLRG 240 Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 +L E ELQ++ E + +G Q+R+Y L PY +VKD RT+ E + VLDGD Sbjct: 241 RLLERELQRKREERARLRGEYRQADFGNQMRTYYLHPYTLVKDHRTDYETSDVQAVLDGD 300 Query: 343 LDDFMKATLA 352 +D F++A L Sbjct: 301 IDPFIEAYLR 310 >gi|320546676|ref|ZP_08040988.1| peptide chain release factor RF1 [Streptococcus equinus ATCC 9812] gi|320448731|gb|EFW89462.1| peptide chain release factor RF1 [Streptococcus equinus ATCC 9812] Length = 359 Score = 213 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 98/348 (28%), Positives = 163/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E ++ +E + L + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMALSKEEASTRETVAVYREYKKVLQNIEDAEEM 66 Query: 76 ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + L+E + + + E + L D + LE+ AGG E+ Sbjct: 67 IKDAGGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL+MY ++AE + +K + +E GIK +++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLQMYQKYAESQGWKFDVMEASYNGVGGIKEVVVMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E EI D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+ HIPTG+ V+ Q+ER+Q KN+ +A ++RA++ + Q + + K+ +G G Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKVIRARVADHFAQIAQNEQD--AERKSTVGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKLDEIIDALVLFDQ 350 >gi|300172696|ref|YP_003771861.1| peptide chain release factor 1 [Leuconostoc gasicomitatum LMG 18811] gi|299887074|emb|CBL91042.1| Peptide chain release factor 1 [Leuconostoc gasicomitatum LMG 18811] Length = 357 Score = 213 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 96/344 (27%), Positives = 173/344 (50%), Gaps = 8/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 V R LN + DP + + + L++E + + Q + ++ Sbjct: 8 LQTVVDRYDELNEQLADPDVAGDGQQYMALLKEAGEMRETVEVYTHYQQVMQGISDAEDM 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E + L+ K+ +E + + L D + +E+ AGG ES +A Sbjct: 68 LDDAEMAPLAKEDLNTLKPEKIVLEDQLKILMLPKDPNDDKNIIMEIRGAAGGDESSLFA 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LL MY R+AEK+++ ++ E G K ++I G N Y LK E G HR+ R+ Sbjct: 128 ADLLDMYRRYAEKQRWVVSIIDETITEVGGYKEVAIMITGDNVYSKLKFESGAHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS +++ V P ++ I+ E++ESD + +R+ GAGGQ+VN +AVR+ H Sbjct: 188 STETQGRVHTSTATVGVMPEFEE-IDFELAESDLEEEFFRSGGAGGQNVNKVSTAVRLVH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 PTG++V+ Q+ER+Q KN+ +A +L +++Y+ Q+ E E K+ +G G + Sbjct: 247 KPTGIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNEAE--YAEKRKSAVGTGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R + +++G+L + + A + + Sbjct: 305 IRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELGEIVDALVIADQ 347 >gi|157827015|ref|YP_001496079.1| peptide chain release factor 2 [Rickettsia bellii OSU 85-389] gi|157802319|gb|ABV79042.1| peptide chain release factor 2 [Rickettsia bellii OSU 85-389] Length = 285 Score = 213 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 171/279 (61%), Positives = 215/279 (77%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +A E+D I+Q+ +LQ + + E L SGEADSN+ +LE++AGAGGTES DWA Sbjct: 1 MAEAENDLEIMQQVEKDLQSLSTIAAKFETECLFSGEADSNNCFLEINAGAGGTESHDWA 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 ++++RMY R+AE+ FKTE + + +GEEAGIKS T+ I G AYGWLK E GVHRLVRIS Sbjct: 61 SIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGRRAYGWLKTEAGVHRLVRIS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+++ +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQHVNTTDSAVRITH Sbjct: 121 PFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 IPTG V QCQ +RSQHKNKAQA ML+AKLYELE+QKR + N ++KT+ WG QIRS Sbjct: 181 IPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWGHQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 YVLQPYQMVKDLRT+ E + VLDGDL++F+ A+LA+ Sbjct: 241 YVLQPYQMVKDLRTDYETSDTKGVLDGDLEEFVSASLAM 279 >gi|62185243|ref|YP_220028.1| peptide chain release factor 1 [Chlamydophila abortus S26/3] gi|81312600|sp|Q5L5L4|RF1_CHLAB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|62148310|emb|CAH64077.1| peptide chain release factor 1 [Chlamydophila abortus S26/3] Length = 361 Score = 213 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 109/340 (32%), Positives = 171/340 (50%), Gaps = 11/340 (3%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL----CDNLILLELA 76 +RL + + +P ++ N E +L +E L + + + D L + Sbjct: 10 KRLEEVEVEISNPEIFNNPKEYSLLSKEHARLSELKNTYDRVMAQEKVLSDDKQALAQEK 69 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 E + + ++ + + + D + +E+ AG GG E+ + Sbjct: 70 DPEMIAMLEEGIQSGKAEVEKLYKILENLLVPPDPDDDLNVIMELRAGTGGDEAALFVGD 129 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 +RMY +A + +K E L + + G K + I G L+ E G HR+ R+ Sbjct: 130 CVRMYHLYASAKGWKYEVLSASESDIGGYKEYVMGISGTGVKRLLQYEAGTHRVQRVPET 189 Query: 197 DSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 ++ R HTS ++ V P +D E+ I E D +IDT+RASGAGGQHVN TDSAVRITH+ Sbjct: 190 ETQGRVHTSAITVAVLPEPAEDDEEVFIDEKDLKIDTFRASGAGGQHVNVTDSAVRITHL 249 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTGVVV CQ ERSQHKNKA+A +L+A++ + E+Q+R + A+ S ++G G +I Sbjct: 250 PTGVVVTCQDERSQHKNKAKAMRILKARIRDAEIQRRHKEASAMRS--AQVGSGDRSERI 307 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 R+Y V D R + S V++GDLD A ++ Sbjct: 308 RTYNFS-QNRVTDHRIGLTLYSLDKVMEGDLDTITSALVS 346 >gi|257453431|ref|ZP_05618726.1| peptide chain release factor 1 [Enhydrobacter aerosaccus SK60] gi|257449183|gb|EEV24131.1| peptide chain release factor 1 [Enhydrobacter aerosaccus SK60] Length = 364 Score = 213 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 107/336 (31%), Positives = 166/336 (49%), Gaps = 11/336 (3%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 F D R + +P + + + L E L + + + D Sbjct: 7 FRLDQMSDRFEEVTAMLSEPETMNDNKKFRELSVEHSDLSALVDVWGKYRQAEEDLATAE 66 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGT 128 E+ + ++E + + + + L D A+LE+ AG GG Sbjct: 67 EMLSDATGDGDMKEMAQEEIQAAKDTINELEDVLNVMMLPKDPNDKVPAFLEIRAGTGGD 126 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ ++ L RMY R+A + ++ E L ++GE G K + G YG LK E G H Sbjct: 127 EAAIFSGDLFRMYERYAATQGWQVEVLSENEGEHGGYKEIISRVSGTGVYGRLKFESGAH 186 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS ++ V P V+ ++I+ +D RIDTYRASGAGGQH+N TDS Sbjct: 187 RVQRVPETESQGRVHTSACTVAVMPEVEIDDTVDINPADLRIDTYRASGAGGQHINKTDS 246 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITHIPTG VV+CQQERSQH N+ +A ML +K+ + ++QK+ + ++ + +G Sbjct: 247 AVRITHIPTGTVVECQQERSQHANRDKAMKMLVSKIQQEKVQKQIDASSDM--RRNLVGS 304 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 G +IR+Y P + D R N+ ++ G Sbjct: 305 GDRSERIRTYNF-PQGRMTDHRINLTLYKLDAIMQG 339 >gi|58337080|ref|YP_193665.1| peptide chain release factor 1 [Lactobacillus acidophilus NCFM] gi|227903648|ref|ZP_04021453.1| peptide chain release factor 1 [Lactobacillus acidophilus ATCC 4796] gi|75432974|sp|Q5FKZ0|RF1_LACAC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|58254397|gb|AAV42634.1| peptide chain release factor I [Lactobacillus acidophilus NCFM] gi|227868535|gb|EEJ75956.1| peptide chain release factor 1 [Lactobacillus acidophilus ATCC 4796] Length = 361 Score = 213 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 99/347 (28%), Positives = 170/347 (48%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ V L DP + + + +E L + K+ ++ + E+ Sbjct: 8 LESLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKENKKEIEDNKEI 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D +++ + ++ E+ + L D D +E+ AGG E+ Sbjct: 68 ISNETDSDLIEMAKEENAELEKEIPELEDQIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY ++AE++ + ++ E G K ++I G Y LK E G HR+ Sbjct: 128 LFAGDLLRMYEKYAERQNWNVSMIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ V P + ++I+I D R+D YR+SGAGGQH+N T SAVR Sbjct: 188 RIPVTESQGRVHTSTATVAVMP-EYEQVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q +RSQ +N+ +A +L++++Y+ + + A K +G G Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQ--AQYDAKRKNAVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + V++G+LD+ + A + + Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTLNKLDRVMNGELDEIIDALILYNQ 350 >gi|119961991|ref|YP_948327.1| peptide chain release factor 1 [Arthrobacter aurescens TC1] gi|119948850|gb|ABM07761.1| peptide chain release factor 1 [Arthrobacter aurescens TC1] Length = 359 Score = 213 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 109/353 (30%), Positives = 178/353 (50%), Gaps = 15/353 (4%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +F+ + + + + DP ++ + A+ L R L + + + D Sbjct: 2 KMFESVQGLLDEHAAIQAQLSDPAVYADQSAARKLGRRSAQLQGIVEAYNKWRGLNDDLE 61 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E+A E+ + + + E + + D+ + LEV G GG E+ Sbjct: 62 AAKEMADEDPEFAAEVVQLEEQIP--AAQERLRRLLIPRDPDDARNVILEVKGGEGGDEA 119 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN------AYGWLKGE 184 +A LLRMY R+AE R +KTE + + + G K + IKG + + LK E Sbjct: 120 ALFAGDLLRMYMRYAESRGWKTEMISATESDLGGYKDVAVAIKGNSNDPAQGVFARLKFE 179 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ +S R HTS + + V P VD+ E+EI+++D +ID YR+SG GGQ VN Sbjct: 180 GGVHRVQRVPVTESQGRIHTSAAGVLVLPEVDEPEELEINQNDLKIDVYRSSGPGGQSVN 239 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVRITH+PTG+VV Q E+SQ +N+ +LRA+L + ++ + A E K+ Sbjct: 240 TTDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARLLAHQQEQID--AANSEQRKS 297 Query: 305 EI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +I +IR+Y P + D RT + + V++GDL+ +++ + Sbjct: 298 QIRTMDRSERIRTYNF-PENRIADHRTGYKAYNLDAVMNGDLEPVIQSAIEAD 349 >gi|330837036|ref|YP_004411677.1| bacterial peptide chain release factor 1 (bRF-1) [Spirochaeta coccoides DSM 17374] gi|329748939|gb|AEC02295.1| bacterial peptide chain release factor 1 (bRF-1) [Spirochaeta coccoides DSM 17374] Length = 354 Score = 213 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 106/342 (30%), Positives = 180/342 (52%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ + L+ L+ K P +++ K LM+ER HL + ++ ++ L L Sbjct: 5 LDSFEKELAGLDMKISSPDTMKDMNLFKSLMQERSHLVPIVEELQHLKHVSSQLEESLAL 64 Query: 76 ALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D +++ T + ++ ++ + + + +E+ AG GG E+ Sbjct: 65 LKSETDPDMIEMTKEEIEGLKAEVEASTSRTKVLLIPPDPLSGKNIIMEIRAGTGGEEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYT +AE + +K E L +++ GIK I G + YG L+ E GVHR+ Sbjct: 125 LFAADLYRMYTHYAEAKNWKIEILTLNETGLGGIKEVVCSISGKDVYGSLRWESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS ++ V P +++ I D ++D R+ G GGQ VNTTDSAVR Sbjct: 185 RVPETEAGGRIHTSACTVAVLPEAEETDIE-IRPEDLKVDVMRSGGPGGQSVNTTDSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV CQ E+SQ KNKA+A +LR++LY++E +K+ + + ++G G Sbjct: 244 MTHLPTGIVVICQDEKSQIKNKAKALRVLRSRLYDMEEEKKAKERADA--RRDQVGSGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P + D R N+ +++G L++ +A Sbjct: 302 SERIRTYNF-PQNRLTDHRINLTLYKLDLIMNGQLEEVTEAL 342 >gi|319408172|emb|CBI81825.1| peptide chain release factor 1 [Bartonella schoenbuchensis R1] Length = 359 Score = 213 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 119/349 (34%), Positives = 178/349 (51%), Gaps = 18/349 (5%) Query: 16 WDNAVQRLSFLNTKTE-DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 +R + ++ P N L E L ++ I+ + + L Sbjct: 9 IKQIEKRFEIIESQMAGSP----NAETYIKLASEYAELQLIVTPIRTLNALYKEIEELKN 64 Query: 75 LALEEDDCSILQETSDN-----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 + ++ ++ + Q+I+ Q L AD A +E+ AG GG+E Sbjct: 65 IISDKQTDVEMRNLAQEELSLLCQKIEQLERELQILLLPKDIADEKSAIIEIRAGTGGSE 124 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A L RMY R+A +K E + + DG+ G K + G + LK E GVHR Sbjct: 125 AALFAGDLFRMYERYANTHNWKVEIISLSDGDVGGYKEIVATVSGKGVFSKLKFESGVHR 184 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + RI ++ R HTS +++ V P + I+I I D RIDT RASGAGGQHVNTTDSA Sbjct: 185 VQRIPETEAGGRIHTSAATVAVLP-EAEEIDIAIHPEDIRIDTMRASGAGGQHVNTTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG++V Q E+SQH+N+ +A +LRA+L+++E QK ES KT+IG G Sbjct: 244 VRITHIPTGIMV-VQAEKSQHQNRTRALQILRARLFDIERQK--AENERSESRKTQIGSG 300 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V++GDLD+ + A ++ + Sbjct: 301 DRSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELIHALISNHQ 348 >gi|307565625|ref|ZP_07628103.1| peptide chain release factor 1 [Prevotella amnii CRIS 21A-A] gi|307345657|gb|EFN91016.1| peptide chain release factor 1 [Prevotella amnii CRIS 21A-A] Length = 370 Score = 213 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 93/354 (26%), Positives = 159/354 (44%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R ++T DP++ + L RE + L + + K L ++ Sbjct: 11 LDGLEARFEEVSTLITDPNVINDQARYVKLTREYKDLGDIMEARKRYIACLTTIKEAKDI 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E+D + + + L ++ + + D+ + +EV AG GG E+ Sbjct: 71 LANENDPDMKEMAREELSDNEILQPKLEEEIKLLLVPKDSEDAKNVQMEVRAGTGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A + MY R+ +K+ + +I++G G K I G YG LK E GVHR+ Sbjct: 131 LFAGDIFNMYKRFCDKKGWTLSVTDINEGAVGGFKEIDFAISGEGVYGILKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ D+ R TS +++ V P D I+E D + DT+R+SGAGGQ+VN +S VR Sbjct: 191 RVPSTDTQGRMQTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKVESGVR 249 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + + ++++C + R Q KNK +A + LR +Y+ E QK I +I K Sbjct: 250 LRYPWKNPNTGEIEEILIECTETRDQPKNKERALSRLRTFIYDREHQKY--INDIANRRK 307 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + + G + IR+Y P V D R ++G++ + + A + Sbjct: 308 SLVSTGDRSAKIRTYNY-PQGRVTDHRIGFTSHDLPGFMNGNIQEMIDALTVAE 360 >gi|153807530|ref|ZP_01960198.1| hypothetical protein BACCAC_01810 [Bacteroides caccae ATCC 43185] gi|149129892|gb|EDM21104.1| hypothetical protein BACCAC_01810 [Bacteroides caccae ATCC 43185] Length = 370 Score = 213 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 101/354 (28%), Positives = 167/354 (47%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V R ++T DP + + L +E + LD+ + KE L + + Sbjct: 11 LDGLVARFEEISTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYMQLLGNIEEARNI 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAGGTESQ 131 E D + + + + + + + E L DS +A LE+ G GG E+ Sbjct: 71 LANESDADMREMAKEEMDSSQERLPVLEEEIKLMLVPADPQDSKNAILEIRGGTGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY ++ E + +K E ++G G K + G N YG LK E GVHR+ Sbjct: 131 IFAGDLFRMYAKYCETKGWKMEVSSANEGAAGGFKEIICSVTGDNVYGTLKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +S+ V P ++ + I+E + + DT+R+ GAGGQ+VN +S VR Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKVESGVR 249 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + +I ++++C + R Q KNK +A LR +Y+ E QK I +I K Sbjct: 250 LRYIWKNPNTGVAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIASKRK 307 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 T + G + IR+Y P + D R N + + +DGD+ D + + + Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLTAFMDGDIQDCIDHLIVAE 360 >gi|83816205|ref|YP_445488.1| peptide chain release factor 1 [Salinibacter ruber DSM 13855] gi|294507374|ref|YP_003571432.1| peptide chain release factor 1 [Salinibacter ruber M8] gi|119361602|sp|Q2S2U3|RF1_SALRD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|83757599|gb|ABC45712.1| peptide chain release factor 1 [Salinibacter ruber DSM 13855] gi|294343702|emb|CBH24480.1| peptide chain release factor 1 [Salinibacter ruber M8] Length = 357 Score = 213 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 104/347 (29%), Positives = 182/347 (52%), Gaps = 12/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R + + DP + + + L +E L+ + I + L + L + Sbjct: 7 LDKVKHRFQEVESLMADPEVANDPDRMRELGQEHSRLEEVVEAIDRYERLLDERDELEGM 66 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYLEVHAGAGGTESQD 132 +E + Q ++ + + + +A +E+ AGAGG E+ Sbjct: 67 IRDESGEMEALAKEELEQLETKLPAVEEDLKQKLIPKDPEEEKNAIVEIRAGAGGDEASL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L R+YT++A+++ + E ++ G + G + +KG + YG LK E GVHR+ R Sbjct: 127 FAGDLFRLYTQYAKQQGWTYELIDASPGTQGGFREVIFAVKGEDVYGTLKYEAGVHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S+ R HTS +++ V P + ++++I+ SD I+T++A+G GGQ VNTTDSAVRI Sbjct: 187 VPETESSGRIHTSAATVAVLP-EAEEVDVDINPSDLTIETFKATGPGGQSVNTTDSAVRI 245 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311 H P+GV V CQ E+SQHKN+++A +LR+++Y E ++ E+ A E+ ++ +G G + Sbjct: 246 KHAPSGVEVSCQDEKSQHKNRSKAMRVLRSRVY--EKKREEQQAEREEARRSMVGSGDRS 303 Query: 312 --IRSYVLQPYQMVKDLRT--NIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P V D R + S ++DG++D + A A + Sbjct: 304 AKIRTYNF-PQDRVTDHRLEGGQKNHSLQPIMDGEIDPIIDALRAEE 349 >gi|322379487|ref|ZP_08053853.1| Peptide chain release factor RF-2 [Helicobacter suis HS1] gi|322380468|ref|ZP_08054667.1| peptide chain release factor 2 [Helicobacter suis HS5] gi|321147113|gb|EFX41814.1| peptide chain release factor 2 [Helicobacter suis HS5] gi|321148094|gb|EFX42628.1| Peptide chain release factor RF-2 [Helicobacter suis HS1] Length = 382 Score = 213 bits (541), Expect = 4e-53, Method: Composition-based stats. Identities = 158/352 (44%), Positives = 223/352 (63%), Gaps = 4/352 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + +L + + DP WQ+ A +E+ ++ + + Sbjct: 25 LQNKCHNIAQIIKPEGLKVQLEQITQEQVDPAFWQDKTLAAQKNQEKMRIERLLQTYEHT 84 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + L L L ++D L + + ++ V+ + +L+ + DS DA + + Sbjct: 85 KHTLE--EALELFELIQEDTQALTQLFEEAPKLAARVQSMEVSVMLANDQDSMDAIVSIQ 142 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 G GGTESQDWA+ML RMY RWAE++ FK E L+ +GEEAGIK +I+G N YG++K Sbjct: 143 PGVGGTESQDWASMLYRMYLRWAERKGFKVELLDYQEGEEAGIKGVAFVIRGVNVYGYMK 202 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E G+HRLVR+SP+++N +RHTSF+S+ V P VDD I I I E D R+DTYRASGAGGQH Sbjct: 203 NENGIHRLVRMSPFNANGKRHTSFASVQVSPEVDDDINIVIEEKDIRVDTYRASGAGGQH 262 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN T+SA+RITH TG+VVQCQ +RSQHKNKA A ML++KLYELEL K+ E +N+ Sbjct: 263 VNKTESAIRITHFATGIVVQCQNDRSQHKNKAMALKMLKSKLYELELCKQREQSNM--EE 320 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K++IGWG QIRSYVL PYQ +KD R+ I ++ +LDGDLD M+ L + Sbjct: 321 KSDIGWGHQIRSYVLAPYQQIKDARSEIAYSNVGAILDGDLDTLMEDVLVSR 372 >gi|24379522|ref|NP_721477.1| peptide chain release factor 1 [Streptococcus mutans UA159] gi|32171546|sp|Q8DU64|RF1_STRMU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|24377463|gb|AAN58783.1|AE014946_8 putative peptide chain release factor 1 [Streptococcus mutans UA159] Length = 359 Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 98/348 (28%), Positives = 163/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L RE + ++ +E + + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANSRETVAVYREYKQVVQNIADAQEM 66 Query: 76 ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + L+E + + + E +F L D + LE+ AGG E+ Sbjct: 67 IKDASGDPELEEMAKEELKNSKVAKEEYEEKLRFLLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + +K E +E G+K ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLNMYQKYAENQGWKFEVMEASANGVGGLKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E EI D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ +G G Sbjct: 246 RIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILYDQ 350 >gi|269959607|ref|ZP_06173988.1| peptide chain release factor 2 [Vibrio harveyi 1DA3] gi|269835665|gb|EEZ89743.1| peptide chain release factor 2 [Vibrio harveyi 1DA3] Length = 260 Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 152/258 (58%), Positives = 196/258 (75%), Gaps = 1/258 (0%) Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 ++ ++E +F + SG+ DS+D Y+++ AG+GGTE+QDW NM+LRMY RWAE + FK E Sbjct: 1 MEQKLEQLEFRRMFSGDHDSSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKAEV 60 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +E+ +GE AG+K AT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSF+S ++YP Sbjct: 61 IEVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPE 120 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D++I I+I+ SD RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK Sbjct: 121 IDENIAIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKD 180 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 QA LRAKL+ELELQK+ E +K++IGWG QIRSYVL +KDLRT +E + Sbjct: 181 QAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRN 239 Query: 335 PSDVLDGDLDDFMKATLA 352 VLDGDLD F++A+L Sbjct: 240 TQAVLDGDLDKFIEASLK 257 >gi|302521935|ref|ZP_07274277.1| peptide chain release factor 1 [Streptomyces sp. SPB78] gi|318060718|ref|ZP_07979441.1| peptide chain release factor 1 [Streptomyces sp. SA3_actG] gi|318075509|ref|ZP_07982841.1| peptide chain release factor 1 [Streptomyces sp. SA3_actF] gi|333024405|ref|ZP_08452469.1| putative peptide chain release factor 1 [Streptomyces sp. Tu6071] gi|302430830|gb|EFL02646.1| peptide chain release factor 1 [Streptomyces sp. SPB78] gi|332744257|gb|EGJ74698.1| putative peptide chain release factor 1 [Streptomyces sp. Tu6071] Length = 357 Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 116/349 (33%), Positives = 177/349 (50%), Gaps = 15/349 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + + + L K DP + + A+ L + L + + + D Sbjct: 1 MFEAVEELIGEHAELEQKLADPSVHADQANARRLSKRYAELTPIVGTYRAWRATGDDIAT 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ELA E+ + + + D + + E + + +D D LE+ AGAGG ES Sbjct: 61 ARELAAEDPEFAAEVKELDERR--EELTEKLRLLLVPRDPSDEKDVILEIKAGAGGDESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG---------PNAYGWLK 182 +A LLRMY R+AE+ +KTE L+ + E G K + +K + +K Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEILDATESELGGYKDVQVAVKTKGNANPEPGQGVWARMK 178 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHR+ R+ +S R HTS + + V P + +++EI+ +D RID YR+SG GGQ Sbjct: 179 YEGGVHRVQRVPSTESQGRIHTSAAGVLVTP-EAEEVDVEINPNDLRIDVYRSSGPGGQS 237 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTGVV CQ E+SQ +NK QA +LR++L ++ E A S Sbjct: 238 VNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREAADARRS 297 Query: 303 KTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 + + +IR+Y P + D R + + VLDGDLD ++A Sbjct: 298 QVRTVDRSEKIRTYNF-PENRISDHRVGYKAYNLDQVLDGDLDAVIQAC 345 >gi|315497942|ref|YP_004086746.1| peptide chain release factor 1 [Asticcacaulis excentricus CB 48] gi|315415954|gb|ADU12595.1| peptide chain release factor 1 [Asticcacaulis excentricus CB 48] Length = 358 Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 109/346 (31%), Positives = 173/346 (50%), Gaps = 14/346 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---DNLIL 72 D V R + + E + E L +E L + + + + L Sbjct: 9 LDQVVDRFRMIEARMESAT---DGTEIVKLSKEHAELKPVVDAVTALLKARASGPELEEL 65 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + L E +E + +R+ + ++ A LEV AG GG E+ Sbjct: 66 IALNDPELSPLAQEEFQELKERLPELERGVALLLAPKDKDENASAILEVRAGTGGDEAAL 125 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+A + ++ E I +G+ G K + G +G LK E GVHR+ R Sbjct: 126 FAGDLFRMYSRYAASQGWRVEIDSISEGDAGGYKEIIASVTGDGVFGKLKFESGVHRVQR 185 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ V P + +EI+I + D RIDTYRASG+GGQHVN TDSAVRI Sbjct: 186 VPATEAGGRIHTSAATVAVLP-EAEDVEIDIQDKDIRIDTYRASGSGGQHVNKTDSAVRI 244 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+V E+SQH N+ A L+A+LY+++ Q + + K+++G G Sbjct: 245 THLPTGIVATSS-EKSQHMNRQIAMRNLKARLYDIQRQALDAARSDA--RKSQVGSGDRS 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ + S ++G++D + A +A + Sbjct: 302 ERIRTYNY-PQGRVSDHRINLTLYNLSQFMEGEMDQMINALIADDQ 346 >gi|198276935|ref|ZP_03209466.1| hypothetical protein BACPLE_03140 [Bacteroides plebeius DSM 17135] gi|198270460|gb|EDY94730.1| hypothetical protein BACPLE_03140 [Bacteroides plebeius DSM 17135] Length = 369 Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 94/353 (26%), Positives = 161/353 (45%), Gaps = 18/353 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V R ++T DP++ + L +E + L + ++ KE + + Sbjct: 11 LEGLVSRFEEVSTLITDPNVIADQKRYVKLTKEYKELGDLMAARKEYLQCINGLEEAKMM 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFES---LLSGEADSNDAYLEVHAGAGGTESQD 132 E D + E ++ + + D +A LE+ G GG E+ Sbjct: 71 MSENDPEMKEMAREEAASCEARIPELEEEIKLLLVPADPQDDRNAILEIRGGTGGDEAAI 130 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++ E + +K E ++G G K + G YG LK E GVHR+ R Sbjct: 131 FAGDLFRMYSKYCESKGWKLEVSSANEGAAGGFKEIICSVTGEKVYGTLKYESGVHRVQR 190 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +S+ V P + I+E + + DT+R+ GAGGQ+VN +S VR+ Sbjct: 191 VPATETQGRVHTSAASVAVLPEAEPFDVE-INEGEIKWDTFRSGGAGGQNVNKVESGVRL 249 Query: 253 THIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 + ++++C + R Q KNK +A + LR +Y+ E QK I +I KT Sbjct: 250 RYNWKNPNTGIVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRKT 307 Query: 305 EIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + G + IR+Y P + D R N + + +DGD+ D + + + Sbjct: 308 MVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 359 >gi|260427219|ref|ZP_05781198.1| peptide chain release factor 1 [Citreicella sp. SE45] gi|260421711|gb|EEX14962.1| peptide chain release factor 1 [Citreicella sp. SE45] Length = 349 Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 117/341 (34%), Positives = 177/341 (51%), Gaps = 14/341 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +R +L + + ++ L RE L + I E D E+ Sbjct: 7 LQQIRERFEYLEARMAEGG--GDIA---ALGREYAELKPVVDQIAEWNRLQADLTEAEEM 61 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + ++ +E L+ + Q L AD+ A LE+ G GG E+ +A Sbjct: 62 LADPEMKALAEEELPALRARLPEAEKALQLALLPRDAADARPAILEIRPGTGGEEAALFA 121 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R++E R ++ E +E D E G+K + I+G N + LK E GVHR+ R+ Sbjct: 122 GDLARMYQRYSEARGWRWEVIEEQDTELGGLKELVVRIEGENVFARLKFESGVHRVQRVP 181 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P ++++I+I+ D RIDT R+SGAGGQHVNTTDSAVRITH Sbjct: 182 ETESGGRIHTSAATVAVLP-EAEAVDIDIASGDLRIDTMRSSGAGGQHVNTTDSAVRITH 240 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV E+SQH+N+ A N+LRA+LY++E QK + ++G G + Sbjct: 241 LPTGLVVTSS-EKSQHRNREIAMNVLRARLYDMERQK--ADDARASDRRAQVGSGDRSER 297 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IR+Y P + D R + +L GDLD+ + A A Sbjct: 298 IRTYNF-PQGRMTDHRIGLTLYRLEAILSGDLDEIVDALTA 337 >gi|290957365|ref|YP_003488547.1| peptide chain release factor 1 (RF-1) [Streptomyces scabiei 87.22] gi|260646891|emb|CBG69988.1| peptide chain release factor 1 (RF-1) [Streptomyces scabiei 87.22] Length = 358 Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 116/350 (33%), Positives = 175/350 (50%), Gaps = 16/350 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + V + L K DP + + A+ L + L + + + D Sbjct: 1 MFEAVEELVGEHADLEKKLADPSVHADQANARKLNKRYAELTPIVGTYRTWKQTGDDIDT 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E DD + E + ++ + E + + +D D LE+ AGAGG ES Sbjct: 61 AREF--AADDPDFIAEVKELEKQREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG----------PNAYGWL 181 +A LLRMY R+AE+ +KTE ++ + E G K + +K + L Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVAVKTKGGQGATEPGQGVWARL 178 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHR+ R+ +S R HTS + + V P + +++EI+ +D RID YR+SG GGQ Sbjct: 179 KYEGGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEVDVEINANDLRIDVYRSSGPGGQ 237 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITHIPTGVV CQ E+SQ +NK QA +LR++L ++ E A Sbjct: 238 SVNTTDSAVRITHIPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAEREAADARR 297 Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 S+ + +IR+Y P + D R + + VLDG+LD ++A Sbjct: 298 SQVRTVDRSEKIRTYNF-PENRISDHRVGFKSYNLDQVLDGELDAVIQAC 346 >gi|306833419|ref|ZP_07466546.1| peptide chain release factor RF1 [Streptococcus bovis ATCC 700338] gi|304424189|gb|EFM27328.1| peptide chain release factor RF1 [Streptococcus bovis ATCC 700338] Length = 359 Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 99/348 (28%), Positives = 165/348 (47%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + L + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMALSKEEANTRETVTVYREYKQILQNIEDAEEM 66 Query: 76 ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + L+E + + + E + L D + LE+ AGG E+ Sbjct: 67 IKDAGGDPELEEMAKEELKDSKASKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A+ LL+MY ++AE + +K + +E GIK +++ G + Y LK E G HR+ Sbjct: 127 ALFASDLLQMYQKYAENQGWKFDVMEASYNGVGGIKEVVVMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E EI D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+ HIPTG+ V+ Q+ER+Q KN+ +A ++RA++ + Q + + K+ IG G Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQNEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVIDALILFDQ 350 >gi|153008371|ref|YP_001369586.1| peptide chain release factor 1 [Ochrobactrum anthropi ATCC 49188] gi|166223580|sp|A6WXQ3|RF1_OCHA4 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|151560259|gb|ABS13757.1| peptide chain release factor 1 [Ochrobactrum anthropi ATCC 49188] Length = 357 Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats. Identities = 118/348 (33%), Positives = 185/348 (53%), Gaps = 18/348 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R S + ++ + P + L E L + I+E+ D + + L + Sbjct: 10 DQLLKRFSMIESQMANNP----DSETYVKLASEYSELQEVVGKIRELTDSRKEAVDLAAM 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + ++ + + + Q L AD +A LE+ AG GG E+ Sbjct: 66 RDDASTDAEMRALALEELPGVEKRIEGLEQEVQILLLPKDAADEKNAILEIRAGTGGLEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A ++ ++ E + +G+ G K + G + LK E GVHR+ Sbjct: 126 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + I+IEI D RIDT RASGAGGQHVNTTDSAV Sbjct: 186 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG++V Q E+SQH+N+A+A +LRA+LY++E QK ES ++++G G Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--ADTERSESRRSQVGSGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V++GDLD+ + A ++ + Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQ 348 >gi|88596258|ref|ZP_01099495.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni 84-25] gi|88191099|gb|EAQ95071.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni 84-25] Length = 355 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 114/345 (33%), Positives = 178/345 (51%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +R LN+ + ++ + L +E+++L+ + KE L + L Sbjct: 6 LDPFFKRFEELNSLLSSSDILNDISKMTTLSKEQKNLEPIVLKAKEYLKTLDNIEENKAL 65 Query: 76 ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + +E + E + L D + +LE+ AG GG E+ + Sbjct: 66 LNDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGTGGDEASLFV 125 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L++ Y R+AE R +K E + +G G K +L+KG AY LK E G HR+ R+ Sbjct: 126 GDLIKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHRVQRVP 185 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P D IEIEI+ +D ++D R+SG GGQ VNTTDSAVRITH Sbjct: 186 QTESQGRVHTSAITVAVMP-EVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVRITH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV Q +SQHKNK A +L+A+LY E+Q+ E +A E+ K+++G G + Sbjct: 245 IPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQESERLAKESEARKSQVGSGDRSER 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++ DG D+ ++ + + Sbjct: 303 IRTYNF-PQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQ 346 >gi|239928894|ref|ZP_04685847.1| peptide chain release factor 1 [Streptomyces ghanaensis ATCC 14672] gi|291437221|ref|ZP_06576611.1| peptide chain release factor 1 [Streptomyces ghanaensis ATCC 14672] gi|291340116|gb|EFE67072.1| peptide chain release factor 1 [Streptomyces ghanaensis ATCC 14672] Length = 355 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 117/347 (33%), Positives = 176/347 (50%), Gaps = 13/347 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + V + L K DP + + A+ L + L ++ + + D Sbjct: 1 MFEAVEELVAEHADLEKKLADPSVHSDQANARRLNKRYAELTPIVATYRSWRQTGDDIET 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EL DD E + Q+ + E + + +D D LE+ AGAGG ES Sbjct: 61 AREL--AADDPDFAAEVRELEQQREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP-------NAYGWLKGE 184 +A LLRMY R+AE+ +KTE ++ + E G K + +K + LK E Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVAVKARGQVEPGQGVWARLKYE 178 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ +S R HTS + + V P + +++EI+ +D RID YR+SG GGQ VN Sbjct: 179 GGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEVDVEINPNDLRIDVYRSSGPGGQSVN 237 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVRITH+PTGVV CQ E+SQ +NK QA +LR++L + ++ E A S+ Sbjct: 238 TTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRSRLLAMAQEEAEREAADARRSQV 297 Query: 305 E-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 + +IR+Y P + D R + + VLDGDL ++A Sbjct: 298 RTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLGAVIQAC 343 >gi|46199879|ref|YP_005546.1| peptide chain release factor 1 [Thermus thermophilus HB27] gi|55981909|ref|YP_145206.1| peptide chain release factor 1 [Thermus thermophilus HB8] gi|2500140|sp|P96077|RF1_THET8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|81567592|sp|Q72HB8|RF1_THET2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|88192257|pdb|2B64|Y Chain Y, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf1 From A Crystal Structure Of The Whole Ribosomal Complex. This File Contains The 30s Subunit, Trnas, Mrna And Release Factor Rf1 From A Crystal Structure Of The Whole Ribosomal Complex". The Entire Crystal Structure Contains One 70s Ribosome, Trnas, Mrna And Release Factor Rf1 And Is Described In Remark 400. gi|209156517|pdb|3D5A|X Chain X, Structural Basis For Translation Termination On The 70s Ribosome. This File Contains The 30s Subunit, Release Factor 1 (Rf1), Two Trna, And Mrna Molecules Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|209156573|pdb|3D5C|X Chain X, Structural Basis For Translation Termination On The 70s Ribosome. This File Contains The 30s Subunit, Release Factor 1 (Rf1), Two Trna, And Mrna Molecules Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. gi|300508626|pdb|3MR8|V Chain V, Recognition Of The Amber Stop Codon By Release Factor Rf1. This Entry 3mr8 Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 3ms1. Molecule B In The Same Asymmetric Unit Is Deposited As 3mrz (50s) And 3ms0 (30s). gi|300508681|pdb|3MS0|V Chain V, Recognition Of The Amber Stop Codon By Release Factor Rf1. This Entry 3ms0 Contains 30s Ribosomal Subunit. The 50s Ribosomal Subunit Can Be Found In Pdb Entry 3mrz. Molecule A In The Same Asymmetric Unit Is Deposited As 3mr8 (30s) And 3ms1 (50s). gi|1785848|dbj|BAA13349.1| peptide chain release factor 1 [Thermus thermophilus] gi|46197506|gb|AAS81919.1| peptide chain release factor 1 [Thermus thermophilus HB27] gi|55773322|dbj|BAD71763.1| peptide chain release factor 1 (RF-1) [Thermus thermophilus HB8] Length = 354 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 108/329 (32%), Positives = 165/329 (50%), Gaps = 8/329 (2%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI-LQETS 89 DP + ++ + L R + I I+E + L D L + + + E Sbjct: 20 SDPEVLKDKGRYQSLSRRYAEMGEVIGLIREYRKVLEDLEQAESLLDDPELKEMAKAERE 79 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L R + + + L D DA +E+ AG GG E+ +A L MY R+AE+ Sbjct: 80 ALLARKEALEKELERHLLPKDPMDERDAIVEIRAGTGGEEAALFARDLFNMYLRFAEEMG 139 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 F+TE L+ H + G ++GP AYG K E GVHR+ R+ ++ R HTS +++ Sbjct: 140 FETEVLDSHPTDLGGFSKVVFEVRGPGAYGTFKYESGVHRVQRVPVTETQGRIHTSTATV 199 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P + + ++ + RID RASG GGQ VNTTDSAVR+ H+PTG++V CQ RSQ Sbjct: 200 AVLP-KAEEEDFALNMDEIRIDVMRASGPGGQGVNTTDSAVRVVHLPTGIMVTCQDSRSQ 258 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDL 326 KN+ +A +LR++L LE+++ EE + ++ +IG G + IR+Y P V D Sbjct: 259 IKNREKALMILRSRL--LEMKRAEEAERLRKTRLAQIGTGERSEKIRTYNF-PQSRVTDH 315 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R VL G L ++A + Sbjct: 316 RIGFTTHDLEGVLSGHLTPILEALKRADQ 344 >gi|302554164|ref|ZP_07306506.1| peptide chain release factor 1 [Streptomyces viridochromogenes DSM 40736] gi|302471782|gb|EFL34875.1| peptide chain release factor 1 [Streptomyces viridochromogenes DSM 40736] Length = 358 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 119/350 (34%), Positives = 173/350 (49%), Gaps = 16/350 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ V + L K DP + + A+ L + L ++ + D Sbjct: 1 MFEAVAELVAEHADLEKKLADPSVHADQANARKLNKRYAELTPIVATYRSWTQTGDDIET 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EL DD E D Q+ + E + + +D D LE+ AGAGG ES Sbjct: 61 AREL--AADDPDFAAEVKDLEQQREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI----------KGPNAYGWL 181 +A LLRMY R+AE+ +KTE ++ + E G K + + G + L Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVAVKTKGGQGATEPGQGVWARL 178 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHR+ R+ +S R HTS + + V P + I++EI+ +D RID YR+SG GGQ Sbjct: 179 KYEGGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEIDVEINPNDLRIDVYRSSGPGGQ 237 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PTGVV CQ E+SQ +NK QA +LR++L ++ E A Sbjct: 238 SVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREAADARR 297 Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 S+ + +IR+Y P + D R + + VLDGDL ++A Sbjct: 298 SQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLGAVIQAC 346 >gi|325300471|ref|YP_004260388.1| Peptide chain release factor 1 [Bacteroides salanitronis DSM 18170] gi|324320024|gb|ADY37915.1| Peptide chain release factor 1 [Bacteroides salanitronis DSM 18170] Length = 370 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 97/353 (27%), Positives = 158/353 (44%), Gaps = 18/353 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V R ++T DP + + L +E + L + + E L + Sbjct: 12 LDGLVARFEEVSTLITDPSVIADQKRYVKLTKEYKELSDIMKARGEYLQCLNGLEEAKMM 71 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL---LSGEADSNDAYLEVHAGAGGTESQD 132 E D + E ++ L + D +A LE+ G GG E+ Sbjct: 72 MGENDPELKEMAREEAAACEARIPELEEEIKLLLIPADPQDDRNAILEIRGGTGGDEAAI 131 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++ E++ +K E +G G K + G YG LK E GVHR+ R Sbjct: 132 FAGDLFRMYSKYCERKGWKLEVSSASEGASGGFKEIICSVTGDKVYGTLKYESGVHRVQR 191 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +S+ V P + I+E + + DT+R+SGAGGQ+VN +S VR+ Sbjct: 192 VPATETQGRVHTSAASVAVLPEAEPFDVE-INEGEIKWDTFRSSGAGGQNVNKVESGVRL 250 Query: 253 THIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 + ++++C + R Q KNK +A LR +Y+ E QK I +I KT Sbjct: 251 RYNWKNPNTGVVEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIASKRKT 308 Query: 305 EIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + G + IR+Y P + D R N + + +DGD+ D + + + Sbjct: 309 MVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360 >gi|296119521|ref|ZP_06838079.1| peptide chain release factor 1 [Corynebacterium ammoniagenes DSM 20306] gi|295967404|gb|EFG80671.1| peptide chain release factor 1 [Corynebacterium ammoniagenes DSM 20306] Length = 358 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 114/346 (32%), Positives = 173/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ V + + DP + + + + L + L I ++ D E+ Sbjct: 8 VDDIVSEYQGIEMQMADPEVASDQNQFRKLSKRYAELRPIIVVHTQLTQAKEDLSDAKEM 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D E + E E DS D +E+ AGAGG E+ +A Sbjct: 68 --AYEDHDFQDEAERLEGVVLELEEQLADLLAPRDEHDSEDIIMEIKAGAGGEEAALFAA 125 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190 L RMY R+A+K F E + I++ + G+K T+ K A+ K E GVHR+ Sbjct: 126 DLARMYERYADKSGFSWEVIGINESDLGGVKDMTITFKSKTPSRDGAWSVFKFEGGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R TS + + VYP D+ E+ I E D R+D YR+SG GGQ VNTTDSAV Sbjct: 186 QRVPVTESQGRIQTSAAGVLVYPEPDEVAEVHIDEKDLRVDVYRSSGKGGQGVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 R+TH+PTG+VV CQ+ERSQ +NKA+A +L+A+L ++E + RE A +S+ + Sbjct: 246 RLTHLPTGLVVTCQRERSQIQNKARAMQVLQARLEQMEREAREAEAGEQRASQVRTMDRS 305 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + + VLDGD+ + A A ++ Sbjct: 306 ERIRTYNW-PENRITDHRIGYKANNLDSVLDGDMGSLIDALQAQER 350 >gi|294055591|ref|YP_003549249.1| peptide chain release factor 1 [Coraliomargarita akajimensis DSM 45221] gi|293614924|gb|ADE55079.1| peptide chain release factor 1 [Coraliomargarita akajimensis DSM 45221] Length = 362 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 111/344 (32%), Positives = 169/344 (49%), Gaps = 13/344 (3%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 D +L+ L+ + DP+ + + A + RE Q + I + + Sbjct: 6 DIAPFRDKLADLDAQMADPNFYSDQRRAAEVSREHQRVSGLIERFEAFHSAQTQIVENEA 65 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFE-----SLLSGEADSNDAYLEVHAGAGGTE 129 + + L+E + + + DS ++ +E+ GAGG E Sbjct: 66 MMADSSVEEELREMAAEEVEELKGQIETLEKDVLRAMVPPDATDSRNSVMEIRGGAGGDE 125 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A L RMYTR+AE + ++ E + E G + I G +AY LK E GVHR Sbjct: 126 ANIFAGDLYRMYTRYAEAKGWRVEVMSTSPAETGGYREIIFNISGEDAYKHLKFESGVHR 185 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ ++ R HTS +++ V P + ++IEI+ D I T RASGAGGQHVNTTDSA Sbjct: 186 VQRVPVTETQGRIHTSTATVAVLP-EAEEVDIEINPQDLEISTMRASGAGGQHVNTTDSA 244 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 V + H PTGV V C ERSQ KN+A+A ++R++L L+ + EE A K +IG G Sbjct: 245 VMMVHKPTGVTVYCADERSQIKNRAKALTVMRSRL--LQAKVDEENAKYAAERKGQIGTG 302 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P + D R + + V+DG LDD + A Sbjct: 303 DRSERIRTYNY-PQGRLTDHRIGMNLS-LPSVIDGALDDLIDAL 344 >gi|227877271|ref|ZP_03995344.1| peptide chain release factor RF1 [Lactobacillus crispatus JV-V01] gi|256842834|ref|ZP_05548322.1| peptide chain release factor 1 [Lactobacillus crispatus 125-2-CHN] gi|256848802|ref|ZP_05554236.1| peptide chain release factor 1 [Lactobacillus crispatus MV-1A-US] gi|262045800|ref|ZP_06018764.1| peptide chain release factor 1 [Lactobacillus crispatus MV-3A-US] gi|293381669|ref|ZP_06627650.1| peptide chain release factor 1 [Lactobacillus crispatus 214-1] gi|295692623|ref|YP_003601233.1| peptide chain release factor 1 [Lactobacillus crispatus ST1] gi|312977646|ref|ZP_07789393.1| peptide chain release factor 1 [Lactobacillus crispatus CTV-05] gi|227863127|gb|EEJ70573.1| peptide chain release factor RF1 [Lactobacillus crispatus JV-V01] gi|256614254|gb|EEU19455.1| peptide chain release factor 1 [Lactobacillus crispatus 125-2-CHN] gi|256714341|gb|EEU29328.1| peptide chain release factor 1 [Lactobacillus crispatus MV-1A-US] gi|260573759|gb|EEX30315.1| peptide chain release factor 1 [Lactobacillus crispatus MV-3A-US] gi|290921716|gb|EFD98737.1| peptide chain release factor 1 [Lactobacillus crispatus 214-1] gi|295030729|emb|CBL50208.1| Peptide chain release factor 1 [Lactobacillus crispatus ST1] gi|310895385|gb|EFQ44452.1| peptide chain release factor 1 [Lactobacillus crispatus CTV-05] Length = 362 Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats. Identities = 101/347 (29%), Positives = 170/347 (48%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V L DP + + + +E L + K+ ++ + E+ Sbjct: 8 LEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKEDKKEIEDNKEI 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D +++ + I+ E+ + L D D +E+ AGG E+ Sbjct: 68 ISSETDPDLIEMAKEENSEIEKEIPELEDQIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY ++AE++ +K ++ E G K ++I G Y LK E G HR+ Sbjct: 128 LFAGDLLRMYEKYAERQNWKVSMIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ V P + ++I+I D R+D YR+SGAGGQH+N T SAVR Sbjct: 188 RIPVTESQGRVHTSTATVAVMP-EYEQVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q +RSQ +N+ +A +L++++Y+ + + A K +G G Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQ--AQYDAKRKNAVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + V++G+LD+ + A + + Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQ 350 >gi|219850039|ref|YP_002464472.1| peptide chain release factor 1 [Chloroflexus aggregans DSM 9485] gi|254790871|sp|B8G7K1|RF1_CHLAD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|219544298|gb|ACL26036.1| peptide chain release factor 1 [Chloroflexus aggregans DSM 9485] Length = 361 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 115/352 (32%), Positives = 172/352 (48%), Gaps = 14/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + QR L P + NV + RE++ L++ ++ +E Q Sbjct: 1 MFDKLEAVAQRYDELTQLMAQPEVATNVTLLQQYAREQRELEDIVTTYREYQAAQRAIAE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYLEVHAGAGGT 128 + E D + + K ++ L DS D +E+ G GG Sbjct: 61 AEAMLDENDPELRALAQEELDTQRKRLATLEEQLKVLLLPRDPNDSKDVIMEIRQGEGGD 120 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMYTR+AE R +K E + + GIK I G AY LK E GVH Sbjct: 121 EAALFAADLFRMYTRFAESRGWKVEVDSLTENGIGGIKEVIFQIHGEGAYSQLKYEGGVH 180 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ ++ R HTS +++ V P V+++ I D RID +R++G GGQ VNTTDS Sbjct: 181 RVQRVPATEARGRIHTSTATVAVLPEVEETEIE-IKPEDLRIDVFRSAGHGGQGVNTTDS 239 Query: 249 AVRITHIP---TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 AVRI + P +VV CQ RSQ +N+ +A +LRA+LY E +KR+ IG S + Sbjct: 240 AVRIVYKPGTPEEIVVTCQDGRSQIQNRERAMTVLRARLYAREQEKRQ--REIGASRLAQ 297 Query: 306 IGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +G G + IR+Y P + D R ++ VLDG+LD ++A + Sbjct: 298 VGSGERAEKIRTYNF-PQDRITDHRIGQNFSNLPAVLDGELDKIIEALIVYD 348 >gi|121996859|ref|YP_001001646.1| peptide chain release factor 2 [Halorhodospira halophila SL1] gi|121588264|gb|ABM60844.1| bacterial peptide chain release factor 2 (bRF-2) [Halorhodospira halophila SL1] Length = 291 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 160/289 (55%), Positives = 214/289 (74%), Gaps = 2/289 (0%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 L D ++ +A EE D L+ ++QR+ +VE +F + SGE D+++A+L++ AG+ Sbjct: 2 LDDADEMVAMAREEGDAETLEAVQADIQRVAGQVETLEFRRMFSGEMDTSNAFLDIQAGS 61 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTE+QDWA MLLRMY RWAE R F+TE +E+ G+EAG+KSAT+ + G A+GWL+ E Sbjct: 62 GGTEAQDWAEMLLRMYLRWAEARGFETEVIEVTAGQEAGVKSATIKVSGEYAFGWLRTET 121 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHRLVR SP+DS RRHTSFSS++V P + +++++IEI SD R+D +RASGAGGQHVN Sbjct: 122 GVHRLVRKSPFDSGGRRHTSFSSVFVSPEIDEENVDIEIDPSDLRVDVFRASGAGGQHVN 181 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TT+SAVRITH PTG+VVQ Q +RSQHKN+A A + LRAKLYELE+Q+R A E +K+ Sbjct: 182 TTESAVRITHEPTGIVVQSQNDRSQHKNRATAMSQLRAKLYELEMQRRRAEAEAQEDTKS 241 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 242 DIGWGNQIRSYVLD-QSRIKDLRTGVEIGNTQAVLDGHLDPFIQASLKA 289 >gi|218129333|ref|ZP_03458137.1| hypothetical protein BACEGG_00910 [Bacteroides eggerthii DSM 20697] gi|217988510|gb|EEC54831.1| hypothetical protein BACEGG_00910 [Bacteroides eggerthii DSM 20697] Length = 370 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 100/354 (28%), Positives = 167/354 (47%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V R ++T DP + + L +E + L + + KE L E+ Sbjct: 11 LEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMKARKEYMQVLSGIEEAKEI 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + L + + + + DS +A LE+ GAGG E+ Sbjct: 71 IANETDAEMREMAREELDACQTRQPELEEQIKLLLVPADPQDSRNAILEIRGGAGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYT++ E + +K + ++G G K + G N YG LK E GVHR+ Sbjct: 131 IFAGDLFRMYTKYCETKGWKLDISSANEGAAGGFKEIICSVTGDNVYGTLKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +S+ V P ++ + I+E + + DT+R+ GAGGQ+VN +S VR Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKVESGVR 249 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + + ++++C + R Q KNK +A + LR +Y+ E QK I +I K Sbjct: 250 LRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRK 307 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 T + G + IR+Y P + D R N + S +DGD+ D + + + Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDGDIQDCIDHLIVAE 360 >gi|158426116|ref|YP_001527408.1| peptide chain release factor 1 [Azorhizobium caulinodans ORS 571] gi|158333005|dbj|BAF90490.1| peptide chain release factor 1 [Azorhizobium caulinodans ORS 571] Length = 357 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 116/345 (33%), Positives = 171/345 (49%), Gaps = 12/345 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V R + + E L RE L + ++ ++ D EL Sbjct: 10 LDQLVARHAEVEALLAAG---AEGEEYVRLGREFSDLSPVVEQVRALRAAERDLADAREL 66 Query: 76 ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + E + ++ + + L D LEV AG GG E+ +A Sbjct: 67 LADPEMRDLAQSEVTRLEAELETLAKEVRLALLPKDAMDERGVILEVRAGTGGDEAALFA 126 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+A ++ + E L +G G K + G AY LK E GVHR+ R+ Sbjct: 127 GDLFRMYARYAAEKGWSVELLSESEGTVGGYKEVVAAVHGRGAYARLKFESGVHRVQRVP 186 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +++ R HTS +++ V P + ++++I+ESD RID YRA GAGGQHVN T+SAVRITH Sbjct: 187 DTETSGRIHTSAATVAVLP-EAEDVDVDINESDLRIDVYRAQGAGGQHVNKTESAVRITH 245 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV Q ERSQH+NKA+A +LR+++ + E QK AN K ++G G + Sbjct: 246 IPTGMVVAVQDERSQHRNKARAMALLRSRMLDEERQK--ADANRAADRKGQVGSGDRSER 303 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 IR+Y P V D R N+ +V+ G LD+ + L + Sbjct: 304 IRTYNF-PQGRVTDHRINLTLYKLDEVMTGQALDEIIDPLLTEHQ 347 >gi|325954306|ref|YP_004237966.1| peptide chain release factor 1 [Weeksella virosa DSM 16922] gi|323436924|gb|ADX67388.1| Peptide chain release factor 1 [Weeksella virosa DSM 16922] Length = 362 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 94/347 (27%), Positives = 165/347 (47%), Gaps = 12/347 (3%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 GL D QR + P + + L +E L + + +E + L Sbjct: 5 GLLDKLRAIKQRFDEVADLIIQPDIITDQARYAKLNKEYSDLRDYVEKQEEYEGLLNVLE 64 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAG 126 + + D +++ ++ + E D + +E+ AG G Sbjct: 65 EANAIIADGSDEEMVELAKLEKDEALHKIPKLEEEIKFMLIPKDPEDDKNVIVELRAGTG 124 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ + + RMY + +++ ++ E L + G K + ++G YG +K E G Sbjct: 125 GDEAAIFVEDIYRMYAMYFKQKGWQHEVLNTSEASGKGFKEMVISVEGNAVYGTMKYESG 184 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S R HTS ++ V P + +++EI+ +D T R+SGAGGQ+VN Sbjct: 185 VHRVQRVPETESQGRVHTSAITVAVLP-EAEEVDVEINPADLEYQTARSSGAGGQNVNKV 243 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 ++ V++TH P+G+V+ CQ+ RSQHKN+ +A +LR KLYE+E +K+ E K+ + Sbjct: 244 ETKVQLTHKPSGIVIVCQEARSQHKNREKALQLLRTKLYEIEFEKKHAER--SEQRKSLV 301 Query: 307 GWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G + IR+Y P V D R N + + ++GD+ + + A Sbjct: 302 STGDRSAKIRTYNY-PQGRVTDHRINKSIYNLDNFMNGDIQEMIDAL 347 >gi|237753220|ref|ZP_04583700.1| peptide chain release factor 1 [Helicobacter winghamensis ATCC BAA-430] gi|229375487|gb|EEO25578.1| peptide chain release factor 1 [Helicobacter winghamensis ATCC BAA-430] Length = 356 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 107/341 (31%), Positives = 176/341 (51%), Gaps = 9/341 (2%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 ++R ++T DP++ ++ L +E+ L+ + + + L L ++ Sbjct: 10 IKRYDEISTLLVDPNILNDIKRITELSKEQSDLEELVEKARAYLNNLQSIEENKALLDDK 69 Query: 80 DDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 + + +E + + + L D + YLE+ AG GG E+ + L Sbjct: 70 ELGDLAKEEIKETETQNVKLEAEIKVLLLPKDPNDDKNIYLELRAGTGGDEAGIFVGDLF 129 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 R Y R+A+ + +K E + + G K L+KG AY LK E G HR+ R+ +S Sbjct: 130 RAYVRYADLKGWKVEIISSSENSVGGYKEIIALVKGKGAYSRLKYEGGTHRVQRVPATES 189 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R HTS ++ + P D +E+ I+ +D RI+ +RA G GGQ VNTTDSAVRITHIPTG Sbjct: 190 QGRVHTSAITVAIMP-EVDDVEVVINPNDLRIEVFRAGGHGGQCVNTTDSAVRITHIPTG 248 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315 + V Q E+SQHKNK +A +L+A++YE EL+ + E E+ K+++G G +IR+Y Sbjct: 249 ISVSMQDEKSQHKNKDKAMKILKARIYEAELEAQME--QNAEARKSQVGSGDRSERIRTY 306 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 P + D R + S +++ G+LD + +A + Sbjct: 307 NY-PQNRLTDHRVGLTLYSLEEIMLSGNLDSVIDPIVAYFQ 346 >gi|86742401|ref|YP_482801.1| peptide chain release factor 1 [Frankia sp. CcI3] gi|119361540|sp|Q2J6M0|RF1_FRASC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|86569263|gb|ABD13072.1| bacterial peptide chain release factor 1 (bRF-1) [Frankia sp. CcI3] Length = 357 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 115/339 (33%), Positives = 173/339 (51%), Gaps = 12/339 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + + + + DP + + +A+ L R L + +E+ D EL Sbjct: 5 LDGLIAEHAEIEGQLADPAVHNDPAKARALSRRYAQLAPVVDLARELDRVEGDLAAAREL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 AL + + + + D+ DA LEV AGAGG ES +A Sbjct: 65 ALLDPSFRDEVQDLGEELARLNDRLRAYL--VPIDPDDARDAILEVKAGAGGEESALFAG 122 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVH 188 LLRMY R+AE+R +KTE L+ + + G + ++ + G YG L+ E GVH Sbjct: 123 DLLRMYLRYAERRGWKTEILDANPSDLGGYRDVSVAVKARGPAGPGDGVYGRLRFEGGVH 182 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS + + V P + +++EI +D RID +R+SG GGQ VNTTDS Sbjct: 183 RVQRVPVTESAGRIHTSAAGVLVLP-EAEEVDVEIDPNDLRIDVFRSSGPGGQSVNTTDS 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307 AVRITHIPTGVVV CQ E+SQ +NK A +LRA+L +K E A++ +S+ + Sbjct: 242 AVRITHIPTGVVVSCQNEKSQLQNKESALRILRARLLGAAREKAESEASLARASQVRTVD 301 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ++R+Y + D R + + VLDG+LD+ Sbjct: 302 RSERVRTYNFA-ENRISDHRVGYKAHNLDQVLDGELDEV 339 >gi|332534752|ref|ZP_08410580.1| peptide chain release factor 2 [Pseudoalteromonas haloplanktis ANT/505] gi|332035839|gb|EGI72323.1| peptide chain release factor 2 [Pseudoalteromonas haloplanktis ANT/505] Length = 248 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 153/246 (62%), Positives = 189/246 (76%), Gaps = 1/246 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG DSNDAYL++ +G+GGTE+QDW N+LLRMY RW E + FK E +E DG+ AGIK Sbjct: 1 MFSGPHDSNDAYLDLQSGSGGTEAQDWCNILLRMYLRWGEAKGFKVELVEATDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 AT+ G AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S +VYP +DD+IEI+I+ S Sbjct: 61 GATVRFVGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFVYPEIDDNIEIDINPS 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ ERSQHKNKAQA L+AKL+E Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNERSQHKNKAQAMKQLKAKLFE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LELQ++ E +K++IGWG QIRSYVL +KDLRT +E + VLDG+LD F Sbjct: 181 LELQQQNAEKQTQEDAKSDIGWGSQIRSYVLDD-ARIKDLRTGVENRNTQSVLDGNLDKF 239 Query: 347 MKATLA 352 ++A+L Sbjct: 240 IEASLK 245 >gi|282158488|gb|ADA77879.1| peptide chain release factor 2 [Francisella tularensis subsp. tularensis NE061598] Length = 248 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 148/246 (60%), Positives = 189/246 (76%), Gaps = 1/246 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ FK ++ DG+ AGIK Sbjct: 1 MFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGFKVTVDDVSDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 TL I+G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S+++ P VDD I+IEI+ + Sbjct: 61 GCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVFISPEVDDDIDIEINPT 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQHKN+ A L++KLYE Sbjct: 121 DLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQHKNRDNAMKQLKSKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 +ELQKR N E SK +IGWG QIRSYVL +KDLRT +E T+ VLDGDLD F Sbjct: 181 MELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIKDLRTGVENTNTQAVLDGDLDKF 239 Query: 347 MKATLA 352 ++A+L Sbjct: 240 IEASLK 245 >gi|328472050|gb|EGF42927.1| peptide chain release factor 2 [Vibrio parahaemolyticus 10329] Length = 248 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 150/246 (60%), Positives = 190/246 (77%), Gaps = 1/246 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ DS+D Y+++ AG+GGTE+QDW NM+LRMY RWAE + FK E +E+ +GE AG+K Sbjct: 1 MFSGDHDSSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKAEVIEVSEGEVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSF+S ++YP +D++I I+I+ + Sbjct: 61 SATVRISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEIDENIAIDINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK QA LRAKL+E Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LELQK+ E +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F Sbjct: 181 LELQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKF 239 Query: 347 MKATLA 352 ++A+L Sbjct: 240 IEASLK 245 >gi|154490829|ref|ZP_02030770.1| hypothetical protein PARMER_00746 [Parabacteroides merdae ATCC 43184] gi|154088577|gb|EDN87621.1| hypothetical protein PARMER_00746 [Parabacteroides merdae ATCC 43184] Length = 369 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 94/353 (26%), Positives = 158/353 (44%), Gaps = 18/353 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V R ++T DP++ + L +E + L+ I KE L + Sbjct: 11 LDGLVSRFEEVSTLITDPNVIADQKRYVKLTKEYKELNEIIKARKEYMQCLNGLEEARLM 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFES---LLSGEADSNDAYLEVHAGAGGTESQD 132 E D + E ++ + + D +A +E+ G GG E+ Sbjct: 71 MAETDPEMREIAREEAAACEARIPELEEEIKLLLVPADPQDDKNAIVEIRGGTGGDEAAL 130 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY ++ E + +K +G G K + G YG LK E GVHR+ R Sbjct: 131 FAGDLYRMYVKYCEMKGWKVALSSCSEGAAGGFKEIIFTVSGEKVYGTLKYESGVHRVQR 190 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ V P D+ I+E + + DT+R+ GAGGQ+VN +S VR+ Sbjct: 191 VPATETQGRVHTSAATVAVLPEADEFDVE-INEGEIKWDTFRSGGAGGQNVNKVESGVRL 249 Query: 253 THIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 ++ ++++C + R Q KNK +A LR+ +Y+ E QK + +I KT Sbjct: 250 RYVWKNPNTGVSEEILIECTETRDQPKNKERALTRLRSFIYDKEHQKYLD--DIANKRKT 307 Query: 305 EIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + G + IR+Y P + D R N + S +DGD+ + + + Sbjct: 308 MVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDGDIQGCLDQLIVAE 359 >gi|332994017|gb|AEF04072.1| protein chain release factor B, RF-2 [Alteromonas sp. SN2] Length = 248 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 157/246 (63%), Positives = 187/246 (76%), Gaps = 1/246 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S D+ND Y+++ +G+GGTE+QDWANMLLRMY RW E FKTE +E+ DG+ AGIK Sbjct: 1 MFSQPNDANDCYIDIQSGSGGTEAQDWANMLLRMYLRWGEAHGFKTELIEVSDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SATL I G A+GWL+ E GVHRLVR SP+DS +RRHTSFSS +VYP VDD I+I+I S Sbjct: 61 SATLRIAGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSSAFVYPEVDDDIDIDIDPS 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQHVN TDSAVRITH PTG+VVQCQ +RSQHKNK QA L+AKLYE Sbjct: 121 DLRIDTYRASGAGGQHVNRTDSAVRITHEPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ELQK+ E SK++IGWG QIRSYVL +KDLRT +E + VLDG LD F Sbjct: 181 YELQKQNAEKQAMEDSKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGGLDKF 239 Query: 347 MKATLA 352 ++A+L Sbjct: 240 IEASLK 245 >gi|257457982|ref|ZP_05623141.1| peptide chain release factor 1 [Treponema vincentii ATCC 35580] gi|257444695|gb|EEV19779.1| peptide chain release factor 1 [Treponema vincentii ATCC 35580] Length = 355 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 116/347 (33%), Positives = 183/347 (52%), Gaps = 12/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ R L + +DP L +N K MRE +L + + + + + Sbjct: 5 LESLSVRWKELEEEIQDPALIKNQNRYKEAMREHAYLSKLMEEYAQYLRFEQEIIQTRAM 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 EE D + + + L ++ ++E + + + + +E+ G GG E+ Sbjct: 65 MQEETDHELKEMAREELHNLEAQLEQSENNLKVLLIPPDPLEEKNIIMEIRGGTGGEEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LL+MYT +AE + +K E L ++ E G K TL I G YG L+ E GVHR+ Sbjct: 125 LFAADLLKMYTHYAELKNWKYEILSSNETELGGFKEVTLSISGKYVYGSLRYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ + + R HTS ++ V P +++ + I + D RID RA G GGQ VNTTDSAVR Sbjct: 185 RVPETEGSGRIHTSAVTVAVLPEAEETEIV-IKQEDLRIDVMRAGGPGGQCVNTTDSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIPTG+VV CQ E+SQ KNKA+A +LR++LY++E K++ E K ++G G Sbjct: 244 ITHIPTGLVVICQDEKSQIKNKAKAMRVLRSRLYDMEEAKKQSER--AEDRKNQVGSGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA-TLAIK 354 +IR+Y P V D R N+ ++ GDL++ ++A +A + Sbjct: 302 SERIRTYNY-PQNRVTDHRINLTLYKLDTIMQGDLNEIVEALCIAAR 347 >gi|32474334|ref|NP_867328.1| peptide chain release factor 2 [Rhodopirellula baltica SH 1] gi|32444872|emb|CAD74874.1| peptide chain release factor 2 (RF-2) [Rhodopirellula baltica SH 1] gi|327543020|gb|EGF29467.1| peptide chain release factor 2 [Rhodopirellula baltica WH47] Length = 337 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 143/326 (43%), Positives = 212/326 (65%), Gaps = 3/326 (0%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P W + A+ ++ + + L +S + E++ D L E+A E++ + Sbjct: 1 MAAPDFWNDSESAQKVVMQLKGLKGIVSPLNELESSAEDLEALFEMADEDESIVDEVRS- 59 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + R+++ ++ + ++LL+G DS A + ++A GGT++ DWA+MLLRMY+ WA ++ Sbjct: 60 -EIDRLEVVLDDLELKALLNGPNDSAGAIVTINARDGGTDANDWADMLLRMYSAWAVGQE 118 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K E L+ + EEAGI A++ ++GP AYG+LKGE+G+HRLVRISP++S S+R TSF+++ Sbjct: 119 YKIELLDRQENEEAGINHASIAVRGPMAYGYLKGEEGMHRLVRISPFNSESKRQTSFAAV 178 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +DDSIE+ + + D R DTYRASGAGGQHVN TDSA+R+THIPT VVQCQ +RSQ Sbjct: 179 SVSPEIDDSIEVNVEKKDVREDTYRASGAGGQHVNKTDSAIRLTHIPTNTVVQCQNQRSQ 238 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329 H+N+ AW MLRAKL +E ++RE ++ G+G QIR+Y L P Q VKD RT Sbjct: 239 HQNRDTAWKMLRAKLARIEEERREAEEAKKYETQARTGFGSQIRNYFLHPDQRVKDARTG 298 Query: 330 IEKTSPSDVLDG-DLDDFMKATLAIK 354 + + VLDG +L F A L +K Sbjct: 299 HYVGNFNSVLDGSELQGFFDAFLRLK 324 >gi|16125109|ref|NP_419673.1| peptide chain release factor 1 [Caulobacter crescentus CB15] gi|13422113|gb|AAK22841.1| peptide chain release factor 1 [Caulobacter crescentus CB15] Length = 385 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 114/345 (33%), Positives = 180/345 (52%), Gaps = 13/345 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + R + + + E L +E L ++ + + L + Sbjct: 37 LDQVLDRFREVEARMGAAT---DGAEIVKLSKEHAELRPVAEAVERLAKLSAERAELDVM 93 Query: 76 ALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 A + + ++++ L + ++ A LEV AG GG E+ +A Sbjct: 94 ASDPEMAEMVRDEIQALDEKLPVMERELALMLAPKDKDENASAILEVRAGTGGDEAALFA 153 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+A+ + ++ E I +GE G K I G +G LK E GVHR+ R+ Sbjct: 154 GDLFRMYQRYAQTQGWRVEIDSISEGEMGGFKEIVASITGDGVFGRLKFESGVHRVQRVP 213 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS +++ V P + +EIEI ESD RIDTYR+SGAGGQHVN TDSAVRITH Sbjct: 214 ATEAQGRIHTSAATVAVLP-EAEDVEIEIKESDLRIDTYRSSGAGGQHVNKTDSAVRITH 272 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTGVVV E+SQH+N+A+A L+A+LY+++ + + + E+ K+++G G + Sbjct: 273 LPTGVVVTSS-EKSQHQNRARAMKNLKARLYDMQREALD--SARSEARKSQVGSGDRSER 329 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 IR+Y P V D R N+ + + +++GD LDD + +A + Sbjct: 330 IRTYNF-PQGRVTDHRINLTLYNLARIMEGDALDDVINPLIAEDQ 373 >gi|329121081|ref|ZP_08249712.1| peptide chain release factor RF1 [Dialister micraerophilus DSM 19965] gi|327471243|gb|EGF16697.1| peptide chain release factor RF1 [Dialister micraerophilus DSM 19965] Length = 359 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 106/346 (30%), Positives = 176/346 (50%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC----DNLI 71 R L K DP + +N + + +E L ++ ++ + + I Sbjct: 6 LQGIENRYLTLEDKLSDPSVIENQEKWRKFSKEHAELGEIVTLYRQYKKVVETQNAALEI 65 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L + EE ++ + + I+ + DS + LE+ AG GG E+ Sbjct: 66 LNDKNQEELFELAKEDLKEAEKEIEKLEHQLHLLLIPKDPNDSRNVILEIRAGTGGDEAA 125 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + LL+MY ++AE RK+K +++++ + G + I G NAY LK E GVHR+ Sbjct: 126 LFVADLLKMYLKFAEHRKWKCSIVDMNETDLGGYREVICTIDGHNAYSILKFESGVHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S+ R HTS ++ V P + ++IEIS+ D R+D YRASGAGGQH+N T SA+R Sbjct: 186 RIPETESSGRVHTSAVTVAVLP-EAEDVDIEISKEDIRVDVYRASGAGGQHINKTSSAIR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV CQ ER Q +N+ +A +L+A+LY+ L+K + ++ K ++G G Sbjct: 245 ITHLPTGIVVTCQNERDQRQNREKAMQILKARLYDEALRK--TKSETAQNRKEQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D R + ++G ++ + + Sbjct: 303 SERIRTYNY-PQGRITDHRIGVSVYQMDSFMNGYMEPIIDRLIEAD 347 >gi|295688344|ref|YP_003592037.1| peptide chain release factor 1 [Caulobacter segnis ATCC 21756] gi|295430247|gb|ADG09419.1| peptide chain release factor 1 [Caulobacter segnis ATCC 21756] Length = 356 Score = 212 bits (540), Expect = 6e-53, Method: Composition-based stats. Identities = 114/345 (33%), Positives = 179/345 (51%), Gaps = 13/345 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + R + + + E L +E L ++ + + L + Sbjct: 8 LDQVLDRFREVEARMGAAT---DGTEIVKLSKEHAELKPVAEAVERLAKLSAERAELDVM 64 Query: 76 ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 A + + ++++ L + ++ A LEV AG GG E+ +A Sbjct: 65 AADPEMADMVRDEMAELDEKLPVLERDLALMLAPKDKDENASAILEVRAGTGGDEAALFA 124 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+A+ ++ E I +GE G K I G +G LK E GVHR+ R+ Sbjct: 125 GDLFRMYQRYAQLHGWRVEIDSISEGEMGGYKEIVASITGDGVFGRLKFESGVHRVQRVP 184 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS +++ V P + +EI+I ESD RIDTYR+SGAGGQHVN TDSAVRITH Sbjct: 185 ATEAQGRIHTSAATVAVLP-EAEDVEIDIKESDLRIDTYRSSGAGGQHVNKTDSAVRITH 243 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTGVVV E+SQH+N+A+A L+A+LY+++ + + + E+ K+++G G + Sbjct: 244 LPTGVVVTSS-EKSQHQNRARAMKNLKARLYDMQREALD--SARSEARKSQVGSGDRSER 300 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 IR+Y P V D R N+ + S +++GD LDD + +A + Sbjct: 301 IRTYNF-PQGRVTDHRINLTLYNLSRIMEGDALDDVINPLIAEDQ 344 >gi|296158326|ref|ZP_06841157.1| peptide chain release factor 2 [Burkholderia sp. Ch1-1] gi|295891270|gb|EFG71057.1| peptide chain release factor 2 [Burkholderia sp. Ch1-1] Length = 280 Score = 212 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 153/266 (57%), Positives = 204/266 (76%), Gaps = 1/266 (0%) Query: 88 TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 + Q I+ V +F + S AD N+A+L++ AGAGGTE+ DWA MLLR Y R+ E+ Sbjct: 14 CESDAQGIEQRVADMEFRRMFSNPADPNNAFLDIQAGAGGTEACDWAAMLLRQYLRYCER 73 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 + FKTE LE DG+ AGIK+AT+ I+G AYG+L+ E GVHRLVR SP+DS+ RHTSFS Sbjct: 74 KGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHRLVRKSPFDSSGGRHTSFS 133 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 S++VYP +DDSIE++I+ +D RIDTYRASGAGGQH+N TDSAVRITH+P+G+VVQCQ +R Sbjct: 134 SVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTDSAVRITHMPSGIVVQCQNDR 193 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQH+N+A+A ML+++LYE E++KR+E + E+ KT++GWG QIRSYVL +KDLR Sbjct: 194 SQHRNRAEAMAMLKSRLYEAEIRKRQEEQDKLEAGKTDVGWGHQIRSYVLD-NSRIKDLR 252 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAI 353 TN+E ++ VLDGDLD F+ A+L Sbjct: 253 TNVEISNTKSVLDGDLDPFISASLKQ 278 >gi|188580162|ref|YP_001923607.1| peptide chain release factor 1 [Methylobacterium populi BJ001] gi|226739114|sp|B1Z914|RF1_METPB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|179343660|gb|ACB79072.1| peptide chain release factor 1 [Methylobacterium populi BJ001] Length = 361 Score = 212 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 111/349 (31%), Positives = 177/349 (50%), Gaps = 15/349 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + R F+ + D + L RE LD ++ I+ + + + L Sbjct: 9 LDAILARHEFVTAQLADGS--ADAESIVQLSRELSELDGVVAAIRHYRAAEANLAGIRAL 66 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130 E ++ + + E + Q L AD A LE+ AG GG E+ Sbjct: 67 IDEPGGDPEMRALAAEEKPEAEEALEQAHRALQLMLLPKDAADEKSAILEIRAGTGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY ++AE + ++ E + +G G + +KG + + LK E G HR+ Sbjct: 127 ALFAGDLFRMYAKYAESKGWRVEVISESEGTVGGYREVVAEVKGRSVFSRLKFESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + ++I I+E+D +IDT RA GAGGQHVN T+SA+ Sbjct: 187 QRVPDTETQGRIHTSAATVAVLP-EAEEVDIAINEADLKIDTMRAQGAGGQHVNKTESAI 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTGVVV Q+ERSQHKN+A+A +LR+KL++ E ++ + K ++G G Sbjct: 246 RITHMPTGVVVFVQEERSQHKNRARAMALLRSKLFDAERTAKD--SARAADRKAQVGSGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIKK 355 +IR+Y P V D R N+ +V+ G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQGRVTDHRINLTLYKLEEVMAGPALDEVIDALVTEHQ 351 >gi|323345650|ref|ZP_08085873.1| peptide chain release factor RF1 [Prevotella oralis ATCC 33269] gi|323093764|gb|EFZ36342.1| peptide chain release factor RF1 [Prevotella oralis ATCC 33269] Length = 370 Score = 212 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 91/364 (25%), Positives = 155/364 (42%), Gaps = 20/364 (5%) Query: 7 LNCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 + + + D R ++T DP + + L +E + L + + + Sbjct: 1 MAENNSILEKLDGLESRYEEVSTLITDPDVINDQQRYVKLTKEYKDLGDIMEARRRYIAC 60 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEV 121 L EL E D + + + L + + E D + +E+ Sbjct: 61 LNAIQEAKELLANESDADMKEMAREELATNEALQPKLEEEIKLALVPKDPEDEKNVQMEI 120 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG GG E+ +A L MY ++ + + + +G G K + G N YG L Sbjct: 121 RAGTGGDEAALFAGDLFNMYKKYCDSKGWTLSVTSESEGAVGGFKEIDFAVSGANVYGTL 180 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHR+ R+ ++ R HTS +++ V P D I+E D + DT+R+SGAGGQ Sbjct: 181 KYESGVHRVQRVPATETQGRMHTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQ 239 Query: 242 HVNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 +VN +S VR+ + ++++C + R Q KNK +A + LR +Y+ E QK Sbjct: 240 NVNKVESGVRLRYPWRNPNTGETEEILIECTETRDQPKNKERALSRLRTFIYDREHQKY- 298 Query: 294 EIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 + +I K+ + G + IR+Y P V D R L G++ + + A Sbjct: 299 -VDDIANRRKSLVSTGDRSAKIRTYNF-PQGRVTDHRIGFTTHDLQGFLGGNIQEMIDAL 356 Query: 351 LAIK 354 + Sbjct: 357 TVAE 360 >gi|86140561|ref|ZP_01059120.1| peptide chain release factor 1 [Leeuwenhoekiella blandensis MED217] gi|85832503|gb|EAQ50952.1| peptide chain release factor 1 [Leeuwenhoekiella blandensis MED217] Length = 360 Score = 212 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 100/342 (29%), Positives = 170/342 (49%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + QR ++ P + + L +E + L + + E+ Sbjct: 7 LNFIKQRFDEVSDLIIQPDIISDQKRYVELNKEYKDLRALMDERENYIKHTQRIEEAEEI 66 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 + D + + L+ K + + F + D+ +A +E+ AG GG E+ Sbjct: 67 IADGSDPEMTEMAKLQLEEAKEAMPALEEKIRFMLVPKDPEDAKNAVMEIRAGTGGDEAS 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY ++ E + ++T ++ +G G K + + G + YG L+ E GVHR+ Sbjct: 127 IFAGDLYRMYMKYCESKGWRTSTIDYSEGTSGGYKEIQVEVTGEDVYGTLRFEAGVHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V+P ++ I D RID + +SG GGQ VNTT SAVR Sbjct: 187 RVPQTETQGRVHTSAATVMVFPEAEEFDVE-IDPKDVRIDYFCSSGPGGQSVNTTYSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +TH PTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL K++E + + G + Sbjct: 246 LTHEPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDLELAKKQEEDAAKRG--SMVTSGDR 303 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P V D R N+ ++++DGD+ + Sbjct: 304 SAKIRTYNY-PQGRVTDHRINLTLYDLANIIDGDIQKIIDEL 344 >gi|162457313|ref|YP_001619680.1| peptide chain release factor RF-1 [Sorangium cellulosum 'So ce 56'] gi|229470353|sp|A9G9L1|RF1_SORC5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|161167895|emb|CAN99200.1| peptide chain release factor RF-1 [Sorangium cellulosum 'So ce 56'] Length = 364 Score = 212 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 99/346 (28%), Positives = 169/346 (48%), Gaps = 12/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLIL 72 + +R L P + E + L RER ++ + ++++ R+ ++ Sbjct: 7 LEAVQRRFQELEHLMCSPAVLAAPAELQRLNRERTEIEPVVVAFARMRDVERRIAEDREA 66 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L + + + L D+ + +E+ +G GG E+ Sbjct: 67 LSDPDLSELAQAELPELELERERLAAELEV--LLLPKDPNDTRNTVIEIRSGEGGEEAAL 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RM R+AE +++K E L + + G K LI G + Y L+ E GVHR+ R Sbjct: 125 FAADLFRMLCRYAETKRWKVEVLNLSEASAGGYKEVAALITGQDVYSHLRYEGGVHRVQR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ V P D +++ I E D I + G GGQ VNTT+SAV+I Sbjct: 185 VPSTETQGRIHTSTATVAVLP-EADEVDVHIDEKDLEISIAASGGPGGQGVNTTNSAVQI 243 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311 H+PTG++V+CQ ERSQ KNKA+A +LR++L LEL++R + +T +G G + Sbjct: 244 KHLPTGMIVKCQDERSQLKNKAKAMKVLRSRL--LELEQRRQEEAQSAERRTMVGTGERA 301 Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +R+Y P V D R + +++GDL++ + A ++ Sbjct: 302 QKVRTYNF-PQNRVTDHRIGLTLHKLDKIIEGDLEELIGALRTHRQ 346 >gi|255323257|ref|ZP_05364392.1| peptide chain release factor 1 [Campylobacter showae RM3277] gi|255299780|gb|EET79062.1| peptide chain release factor 1 [Campylobacter showae RM3277] Length = 355 Score = 212 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 118/340 (34%), Positives = 177/340 (52%), Gaps = 9/340 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 R L+ DP + ++ L +E+ +L++ S K L D L + + Sbjct: 11 DRYDELSRLLSDPSITNDIANMTKLSKEQSNLEDIASAAKSYLQTLADIEENKALLDDAE 70 Query: 81 DCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139 + ++ NL+ K E + L D + +LE+ AG GG E+ +A L Sbjct: 71 LGELAKDELKNLESQKENLEEEIKILLLPKDPNDDKNVFLEIRAGTGGDEAALFAGDLFN 130 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 YTR+AE R +K E + +G G K LLIKG AY LK E G HR+ R+ +S Sbjct: 131 AYTRYAELRGYKFEIVSQSEGNTGGFKEIILLIKGKGAYSRLKFEGGTHRVQRVPETESQ 190 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS ++ + P V+DS I+ +D RID R+SG GGQ VNTTDSAVRITHIPTG+ Sbjct: 191 GRVHTSAVTVAIMPEVEDSEIE-INPNDLRIDVMRSSGHGGQSVNTTDSAVRITHIPTGI 249 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYV 316 VV Q +SQHKNK A +L+A+LYE++ ++R +A K+++G G +IR+Y Sbjct: 250 VVTNQDGKSQHKNKEAAMKVLKARLYEIQEEER--LAKETSERKSQVGTGDRSGRIRTYN 307 Query: 317 LQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 P + D R N+ ++ G D+ ++ +A + Sbjct: 308 F-PQNRISDHRINLTLYRLDAIMAAGLFDEIIEPLIAHYQ 346 >gi|241895238|ref|ZP_04782534.1| peptide chain release factor 1 [Weissella paramesenteroides ATCC 33313] gi|241871544|gb|EER75295.1| peptide chain release factor 1 [Weissella paramesenteroides ATCC 33313] Length = 361 Score = 212 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 108/352 (30%), Positives = 174/352 (49%), Gaps = 13/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + V R ++ DP + + L +E L + K + + Sbjct: 4 IFEKVQSVVDRYEEVSEMISDPEVIADTKRFLALSKEEGSLRETVETFKHYKQVVVGIEE 63 Query: 72 LLEL-----ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 E+ E + +E D + + + L D + +E+H AG Sbjct: 64 NEEILREEANDSELEELAKEELKDLRVEKEALEDQIKILLLPKDPNDDKNIIMEIHGAAG 123 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E +A L MY R+AEK+ ++ E ++ + E G K L+I G N Y LK E G Sbjct: 124 GDEGALFAADLYDMYVRYAEKQGWQVEIIDENKTEIGGYKEIVLMITGNNVYSKLKFENG 183 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P + ++IEI++ D R+D YR+SGAGGQH+N T Sbjct: 184 AHRVQRVPETESAGRVHTSTATVGVMP-EYEDVDIEIADKDLRVDVYRSSGAGGQHINKT 242 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+TH+PTG+VV Q +RSQ +N+A+A +L+A++Y+ + E E KT + Sbjct: 243 SSAVRMTHLPTGIVVAMQDQRSQQQNRAKAMEILKARVYDYYASQNEAE--YAEQRKTAV 300 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R + +++G+L D + A L + Sbjct: 301 GTGDRSERIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELSDVIDALLIADQ 351 >gi|238650499|ref|YP_002916351.1| peptide chain release factor 2 [Rickettsia peacockii str. Rustic] gi|238624597|gb|ACR47303.1| peptide chain release factor 2 [Rickettsia peacockii str. Rustic] Length = 285 Score = 212 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 167/279 (59%), Positives = 212/279 (75%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +A E+D L + +L+ + + + E L SGEAD N+ +LE++AGAGGTES DWA Sbjct: 1 MAEAENDLETLSQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEINAGAGGTESHDWA 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 ++++RMY R+AE+ FKTE + + +GEEAGIKS T+ I G AYGW K E GVHRLVRIS Sbjct: 61 SIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTEAGVHRLVRIS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+++ +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQHVNTTDSAVRITH Sbjct: 121 PFNAAGKRMTSFASSWVYPEIDDNIAIIIEDKDLRIDTFRASGAGGQHVNTTDSAVRITH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 IPTG+V QCQ +RSQHKNKAQA ML+AKLYELE+QKR + N ++KT+ WG QIRS Sbjct: 181 IPTGMVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWGHQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 YVLQPYQMVKDLRT+ E + VLDGDL++F+ A LA+ Sbjct: 241 YVLQPYQMVKDLRTDYETSDTKGVLDGDLEEFVSANLAM 279 >gi|118588514|ref|ZP_01545923.1| peptide chain release factor 1 [Stappia aggregata IAM 12614] gi|118439220|gb|EAV45852.1| peptide chain release factor 1 [Stappia aggregata IAM 12614] Length = 357 Score = 212 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 125/346 (36%), Positives = 184/346 (53%), Gaps = 18/346 (5%) Query: 16 WDNAVQRLSFLNTKTE-DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 D + R + L +P + L RE L+ + I+ + D Sbjct: 7 LDTLLDRFAELEHMMSANP----DPGAYVKLSREYAGLEPLVGKIRALIKAEQDLAGAKA 62 Query: 75 LALEEDDCSIL-----QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L + + + E + +R++ + + L EADSNDA LEV AG GG E Sbjct: 63 LLQDPSSDAEMRELAEMERDELEERVEELAQDVRIGLLPKDEADSNDAILEVRAGTGGDE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A L RMY R+AE + +K E L +GE G K + G N + LK E GVHR Sbjct: 123 AALFAGDLFRMYQRYAELQGWKVEILSASEGEVGGYKEVIASVSGENVFAKLKFESGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS +++ V P + ++I++ ESD RIDTYRASGAGGQHVNTTDSA Sbjct: 183 VQRVPATESGGRIHTSAATVAVLP-QAEDVDIDVQESDLRIDTYRASGAGGQHVNTTDSA 241 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV Q ERSQHKNKA+A +LRA++Y+ E ++ + E+ + ++G G Sbjct: 242 VRITHLPTGIVVAVQDERSQHKNKARAMQLLRARIYDEERER--AASERTEARRLQVGSG 299 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351 +IR+Y P V D R + +L G+ L + ++ + Sbjct: 300 DRSERIRTYNY-PQGRVTDHRIGLTLYKLEQILSGEALGEVIEPLI 344 >gi|302558381|ref|ZP_07310723.1| peptide chain release factor 1 [Streptomyces griseoflavus Tu4000] gi|302475999|gb|EFL39092.1| peptide chain release factor 1 [Streptomyces griseoflavus Tu4000] Length = 358 Score = 212 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 117/350 (33%), Positives = 175/350 (50%), Gaps = 16/350 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + V + L K DP + + A+ L + L ++ + + D Sbjct: 1 MFEAVEELVAEHADLEKKLADPSVHSDQANARRLNKRYAELTPIVATYRSWKQTGDDIET 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EL DD E D ++ + E + + +D D LE+ AGAGG ES Sbjct: 61 AREL--AADDPDFAAEVKDLEKQREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI----------KGPNAYGWL 181 +A LLRMY R+AE+ +KTE ++ + E G K + + G + L Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVAVKTKGGQGATEPGQGVWARL 178 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHR+ R+ +S R HTS + + V P + +++EI+ +D RID YR+SG GGQ Sbjct: 179 KYEGGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEVDVEINPNDLRIDVYRSSGPGGQ 237 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PTGVV CQ E+SQ +NK QA +LR++L ++ E A Sbjct: 238 SVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREAADARR 297 Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 S+ + +IR+Y P + D R + + VLDGDL ++A Sbjct: 298 SQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLAAVIQAC 346 >gi|226945982|ref|YP_002801055.1| peptide chain release factor 2 [Azotobacter vinelandii DJ] gi|226720909|gb|ACO80080.1| peptide chain release factor 2 [Azotobacter vinelandii DJ] Length = 280 Score = 212 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 157/253 (62%), Positives = 198/253 (78%), Gaps = 1/253 (0%) Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159 E +F + SGE D+ +AYL+V AG+GGTE+QDWANMLLRMY RWA+K F TE +E+ + Sbjct: 26 EKLEFRRMFSGEMDARNAYLDVQAGSGGTEAQDWANMLLRMYLRWADKHGFDTEIVELSE 85 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 GE AGIKSAT+ ++G A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++ P VDD+I Sbjct: 86 GEVAGIKSATVHVRGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFSAVFASPEVDDNI 145 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 EI+I+ +D R+DTYR+SGAGGQHVNTTDSAVRITH+PT VV CQ ERSQH N+ +A M Sbjct: 146 EIDINPADLRVDTYRSSGAGGQHVNTTDSAVRITHLPTNTVVSCQNERSQHANRDRAMKM 205 Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 LRAKLYELE+ KR A E +K++IGWG QIRSYVL +KDLRT IE ++ VL Sbjct: 206 LRAKLYELEVMKRNVAAQALEDTKSDIGWGHQIRSYVLD-QSRIKDLRTGIENSNCDAVL 264 Query: 340 DGDLDDFMKATLA 352 DGDLD+F++A+L Sbjct: 265 DGDLDEFIEASLK 277 >gi|328954736|ref|YP_004372069.1| bacterial peptide chain release factor 1 (bRF-1) [Coriobacterium glomerans PW2] gi|328455060|gb|AEB06254.1| bacterial peptide chain release factor 1 (bRF-1) [Coriobacterium glomerans PW2] Length = 355 Score = 212 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 115/352 (32%), Positives = 172/352 (48%), Gaps = 14/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D ++ L K DP + + E L +E + + ++ + D Sbjct: 1 MLDKLKKLIKAYEDLEKKLSDPAVMGDQKEYTRLAKEHANQADLVAMARAYVTAYDDIEA 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127 E+ EE D ++ + ++ + E D + +E+ + AGG Sbjct: 61 AKEMLHEETDAQSKAMLLADISENEAKIPGLENEIKVMLIPGDPNDEKNTIMEIRSAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L +MY R+ E ++K E L E G KS + G Y +K E GV Sbjct: 121 DEAAIFAGDLFKMYERFFEAHRWKMELLSASPSEAGGFKSIEFKVSGDKVYSLMKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +S R TS +++ V P D I+I+I + D RIDTY ASG GGQ VNTT Sbjct: 181 HRVQRIPKTESQGRIQTSTATVAVLP-EADEIDIKIDQGDLRIDTYCASGPGGQCVNTTY 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PT VVQ Q++RSQ +N+ MLRA+LYE EL++++ +G +++IG Sbjct: 240 SAVRITHLPTNTVVQSQEQRSQIQNREVCMQMLRARLYERELEQQQAE--LGAERQSQIG 297 Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 G + IR+Y QP V D R T + VL GD L + A A + Sbjct: 298 RGNRSEKIRTYN-QPQDRVTDHRIGFSSTY-NGVLLGDQLATVINALSAADR 347 >gi|305667119|ref|YP_003863406.1| peptide chain release factor 2 [Maribacter sp. HTCC2170] gi|88708053|gb|EAR00291.1| peptide chain release factor 2 [Maribacter sp. HTCC2170] Length = 313 Score = 212 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 142/308 (46%), Positives = 208/308 (67%), Gaps = 2/308 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ Q + + Q + D +L+E E + + + + E +F+ Sbjct: 1 MKFIQSKKHWVDDFNAAQTLVGDLEVLMEFLKEGEVSENEVNSQYSKATGLI--EKLEFK 58 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++LS E D A L++ AGAGGTES DWA ML+RMY W++K FK + L +G+ AGI Sbjct: 59 NMLSEEGDELTAVLQITAGAGGTESCDWAAMLMRMYMMWSQKNGFKVKELNYQEGDVAGI 118 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ TL ++G A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDSIEI+++ Sbjct: 119 KTVTLEVEGEFAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIDVNP 178 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D I T R+SGAGGQ+VN ++ V++ H P+G+ +QC RSQH N+A A ML+++LY Sbjct: 179 ADIEITTARSSGAGGQNVNKVETKVQLVHKPSGIQIQCSDSRSQHDNRATAMKMLKSQLY 238 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+K+ E ESSK +I WG QIR+YV+ PY++VKD+RT+ E + V+DG++D Sbjct: 239 EIELRKKMEAREEIESSKMKIEWGSQIRNYVMHPYKLVKDVRTSEETGNVDAVMDGNIDQ 298 Query: 346 FMKATLAI 353 F+KA L + Sbjct: 299 FLKAFLMM 306 >gi|269926759|ref|YP_003323382.1| peptide chain release factor 1 [Thermobaculum terrenum ATCC BAA-798] gi|269790419|gb|ACZ42560.1| peptide chain release factor 1 [Thermobaculum terrenum ATCC BAA-798] Length = 355 Score = 212 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 123/346 (35%), Positives = 186/346 (53%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72 DN +R L+ DP ++ + + RER L++ +S +E + ++ L Sbjct: 5 LDNIEKRFDELDRMMSDPEIFSDPSRLMEVARERSELEDIVSLYREYKKVKLTREEDRRL 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 +E + +E R K E + L D D +E+ AG GG E+ Sbjct: 65 MEDPDPDIRQMAEEEYEQLADREKDLEERLKIALLPKDPNDEKDVIVEIRAGTGGEEAAL 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMYTR+AE++ +KTE L + + G K +KG AY LK E GVHR+ R Sbjct: 125 FAADLYRMYTRYAERQGWKTEVLSTSESDAGGFKEIIFEVKGRGAYSRLKYESGVHRVQR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS +++ V P + +E+EI D RID +R++G GGQ VNTTDSAVRI Sbjct: 185 VPVTESQGRIHTSTATVAVLP-EAEEVEVEIDPEDLRIDVFRSTGHGGQSVNTTDSAVRI 243 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311 TH+PTG+VV CQ E+SQ KN+A+A +LRA+LYE+E +KREE ++ +G G + Sbjct: 244 THLPTGLVVTCQDEKSQLKNRAKAMAVLRARLYEMERRKREEELGQV--RRSMVGTGERS 301 Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R ++ +LDG++D +++ + Sbjct: 302 EKIRTYNF-PQDRVTDHRIKESFSNLPAILDGEIDRIIESLQVADR 346 >gi|156973278|ref|YP_001444185.1| hypothetical protein VIBHAR_00959 [Vibrio harveyi ATCC BAA-1116] gi|156524872|gb|ABU69958.1| hypothetical protein VIBHAR_00959 [Vibrio harveyi ATCC BAA-1116] Length = 260 Score = 212 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 152/258 (58%), Positives = 197/258 (76%), Gaps = 1/258 (0%) Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 ++ ++E +F + SG+ DS+D Y+++ AG+GGTE+QDW NM+LRMY RWAE + FK+E Sbjct: 1 MEEKLEQLEFRRMFSGDHDSSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKSEV 60 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +E+ +GE AG+K AT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSF+S ++YP Sbjct: 61 IEVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPE 120 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D++I+I+I+ SD RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK Sbjct: 121 IDENIDIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKD 180 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 QA LRAKL+ELELQK+ E +K++IGWG QIRSYVL +KDLRT +E + Sbjct: 181 QAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRN 239 Query: 335 PSDVLDGDLDDFMKATLA 352 VLDGDLD F+ A+L Sbjct: 240 TQAVLDGDLDKFIGASLK 257 >gi|160891026|ref|ZP_02072029.1| hypothetical protein BACUNI_03473 [Bacteroides uniformis ATCC 8492] gi|270294364|ref|ZP_06200566.1| peptide chain release factor 1 [Bacteroides sp. D20] gi|317480970|ref|ZP_07940050.1| peptide chain release factor 1 [Bacteroides sp. 4_1_36] gi|156859247|gb|EDO52678.1| hypothetical protein BACUNI_03473 [Bacteroides uniformis ATCC 8492] gi|270275831|gb|EFA21691.1| peptide chain release factor 1 [Bacteroides sp. D20] gi|316902863|gb|EFV24737.1| peptide chain release factor 1 [Bacteroides sp. 4_1_36] Length = 370 Score = 212 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 97/354 (27%), Positives = 166/354 (46%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V R ++T DP + + L +E + L + ++ KE L E+ Sbjct: 11 LEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMNARKEYMQVLGGIEEAKEI 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + L + + + + D +A LE+ G GG E+ Sbjct: 71 IANETDQEMREMAREELDACQTRQPELEEQIKLLLVPADPQDGRNAILEIRGGTGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYT++ E + ++ E ++G G K + G N YG LK E GVHR+ Sbjct: 131 IFAGDLFRMYTKYCESKGWRMEISSANEGAAGGFKEIVCSVTGDNVYGTLKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +S+ V P ++ + I+E + + DT+R+ GAGGQ+VN +S VR Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKVESGVR 249 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + + ++++C + R Q KNK +A + LR +Y+ E QK I +I K Sbjct: 250 LRYNWKNPNTGIVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRK 307 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 T + G + IR+Y P + D R N + + +DGD+ D + + + Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360 >gi|58038522|ref|YP_190486.1| peptide chain release factor 1 [Gluconobacter oxydans 621H] gi|81557234|sp|Q5FUR9|RF1_GLUOX RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|58000936|gb|AAW59830.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Gluconobacter oxydans 621H] Length = 353 Score = 212 bits (539), Expect = 7e-53, Method: Composition-based stats. Identities = 108/348 (31%), Positives = 172/348 (49%), Gaps = 12/348 (3%) Query: 14 FD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 FD + V R + L + L +E L+ ++ I+ + Sbjct: 3 FDDRLERIVARSEEVQALMSSGELTG--EDFTRLSQEYAELEPVVASIQAWKSAEEQKAG 60 Query: 72 LLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L + + + Q ++ + L AD A LE+ AGG E+ Sbjct: 61 AQALLDDPEMRELAQMELAEIEATLPDLQHALRLALLPKDAADERSAILEIRPAAGGDEA 120 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L Y R++E+ ++ E +E + E AG+K I G + + LK E GVHR+ Sbjct: 121 GLFAAELFDAYRRFSEQNGWRFEVMEYAENEVAGLKEGMATISGRSVFARLKYESGVHRV 180 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS ++ V P + +++ +++ D RID YRASGAGGQHVN T+SAV Sbjct: 181 QRVPATESQGRIHTSTVTVAVLP-EAEEVDVTVNDDDLRIDVYRASGAGGQHVNKTESAV 239 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+TH+P+G+VV Q+E+SQHKNKA+A +LRA+LYE E + A K+++G G Sbjct: 240 RVTHMPSGIVVAMQEEKSQHKNKAKAMKILRARLYERERAQL--HATRAADRKSQVGTGD 297 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ ++ G+ D+ + A ++ Sbjct: 298 RSERIRTYNF-PQGRVTDHRINLTLYKIDRIMGGEFDEIIDALTREEQ 344 >gi|289626068|ref|ZP_06459022.1| peptide chain release factor 2, programmed frameshift [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646233|ref|ZP_06477576.1| peptide chain release factor 2, programmed frameshift [Pseudomonas syringae pv. aesculi str. 2250] Length = 293 Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 164/290 (56%), Positives = 215/290 (74%), Gaps = 1/290 (0%) Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D LL ++ EE+D + + + + ++R++ +E +F + SGE D N+AYL++ A Sbjct: 3 SGLADAKDLLLMSAEEEDQAAVDDVATEVERLRESLEKLEFRRMFSGEMDPNNAYLDIQA 62 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTE+QDWAN+LLRMY RWA+KR F +E+ GE AGIK AT+ IKG A+GWL+ Sbjct: 63 GSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRT 122 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ SD RIDTYR+SGAGGQHV Sbjct: 123 EIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRSSGAGGQHV 182 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSAVRITH+PT VV CQ ERSQH NK A MLRA+LYE E+QKR + E +K Sbjct: 183 NTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTK 242 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 ++IGWG QIRSYVL +KDLRTNIE++ VLDGD+D+++ A+L Sbjct: 243 SDIGWGHQIRSYVLD-ASRIKDLRTNIERSDCDKVLDGDIDEYLIASLKQ 291 >gi|239617233|ref|YP_002940555.1| peptide chain release factor 1 [Kosmotoga olearia TBF 19.5.1] gi|239506064|gb|ACR79551.1| peptide chain release factor 1 [Kosmotoga olearia TBF 19.5.1] Length = 361 Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 116/344 (33%), Positives = 179/344 (52%), Gaps = 9/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++L + K D + N + L + L + + + E+ Sbjct: 7 IELFKKQLEEVEAKLSDSSIVGNPSKLMELSKRHAELKEISRSYDLLASKKQELQEWEEI 66 Query: 76 A--LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 L ++ ++ LQ+ ++E L+ E D +E+ AG GG E+ + Sbjct: 67 KELLSPEEREEAEKNIAELQKEIEQIELNLKFLLIPDELGGKDIIVEIRAGTGGEEAALF 126 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A L RMYTR+AE+ +K E LE ++ + G K T IKG + + LK E GVHR+ R+ Sbjct: 127 AGDLFRMYTRYAERNSWKVETLESNETDLGGFKEVTFQIKGKDVFRKLKYESGVHRVQRV 186 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +S R HTS +++ V P +++ I S+ RIDT+R+SGAGGQHVN T+SAVRI Sbjct: 187 PQTESGGRIHTSTATVAVLP-KASEVDVAIDPSELRIDTFRSSGAGGQHVNRTESAVRIV 245 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ-- 311 H+PTG+ V Q ERSQH+NKA+A +LRA+LY L ++E + + + +++IG G + Sbjct: 246 HLPTGITVTVQSERSQHQNKARAMEILRARLYSLYRSQQE--STLSQQRRSQIGTGERSE 303 Query: 312 -IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P V D R N D+LDGDLD+ + Sbjct: 304 KIRTYNF-PQNRVTDHRINYTTYRLQDILDGDLDELIAKLAEAD 346 >gi|262395207|ref|YP_003287061.1| peptide chain release factor 2 [Vibrio sp. Ex25] gi|262338801|gb|ACY52596.1| peptide chain release factor 2 [Vibrio sp. Ex25] Length = 260 Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 155/258 (60%), Positives = 198/258 (76%), Gaps = 1/258 (0%) Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 ++ ++E +F + SG+ DS+D Y+++ AG+GGTE+QDW NMLLRMY RWAE + FK E Sbjct: 1 MEEKLEKLEFRRMFSGDHDSSDCYIDLQAGSGGTEAQDWTNMLLRMYLRWAEAKGFKAEV 60 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +E+ +GE AG+KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSF+S ++YP Sbjct: 61 IEVSEGEVAGLKSATVRISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPE 120 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +D++I+I+I+ SD RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK Sbjct: 121 IDENIDIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKD 180 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 QA LRAKL+ELELQK+ E +K++IGWG QIRSYVL +KDLRT IE + Sbjct: 181 QAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGIENRN 239 Query: 335 PSDVLDGDLDDFMKATLA 352 VLDGDLD F++A+L Sbjct: 240 TQAVLDGDLDKFIEASLK 257 >gi|298488301|ref|ZP_07006333.1| Peptide chain release factor 2 [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298157123|gb|EFH98211.1| Peptide chain release factor 2 [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 293 Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 164/290 (56%), Positives = 215/290 (74%), Gaps = 1/290 (0%) Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D LL ++ EE+D + + + + ++R++ +E +F + SGE D N+AYL++ A Sbjct: 3 SGLADAKDLLLMSAEEEDQAAVDDVAAEVERLRESLEKLEFRRMFSGEMDPNNAYLDIQA 62 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTE+QDWAN+LLRMY RWA+KR F +E+ GE AGIK AT+ IKG A+GWL+ Sbjct: 63 GSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRT 122 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ SD RIDTYR+SGAGGQHV Sbjct: 123 EIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRSSGAGGQHV 182 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSAVRITH+PT VV CQ ERSQH NK A MLRA+LYE E+QKR + E +K Sbjct: 183 NTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTK 242 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 ++IGWG QIRSYVL +KDLRTNIE++ VLDGD+D+++ A+L Sbjct: 243 SDIGWGHQIRSYVLD-ASRIKDLRTNIERSDCDKVLDGDIDEYLIASLKQ 291 >gi|170694748|ref|ZP_02885899.1| peptide chain release factor 2 [Burkholderia graminis C4D1M] gi|170140379|gb|EDT08556.1| peptide chain release factor 2 [Burkholderia graminis C4D1M] Length = 280 Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 151/266 (56%), Positives = 203/266 (76%), Gaps = 1/266 (0%) Query: 88 TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 + Q ++ V +F + + AD N+A+L++ AGAGGTE+ DWA MLLR Y R+ E+ Sbjct: 14 CEADAQALEQRVADMEFRRMFANPADPNNAFLDIQAGAGGTEACDWAAMLLRQYLRYCER 73 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 + FKTE LE DG+ AGIK+AT+ I+G AYG+L+ E GVHRLVR SP+DS+ RHTSFS Sbjct: 74 KGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHRLVRKSPFDSSGGRHTSFS 133 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 S++VYP VDDSIE++I+ +D RIDTYRASGAGGQH+N TDSAVRITH+P+G+VVQCQ +R Sbjct: 134 SVFVYPEVDDSIEVDINPADLRIDTYRASGAGGQHINKTDSAVRITHMPSGIVVQCQNDR 193 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQH+N+A+A ML+++LYE E++KR+ + E+ KT++GWG QIRSYVL +KDLR Sbjct: 194 SQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAGKTDVGWGHQIRSYVLD-NSRIKDLR 252 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAI 353 TN+E ++ VLDGDLD F+ A+L Sbjct: 253 TNVEISNTKSVLDGDLDPFISASLKQ 278 >gi|83310717|ref|YP_420981.1| protein chain release factor A [Magnetospirillum magneticum AMB-1] gi|119361556|sp|Q2W6V3|RF1_MAGMM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|82945558|dbj|BAE50422.1| Protein chain release factor A [Magnetospirillum magneticum AMB-1] Length = 354 Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 117/345 (33%), Positives = 186/345 (53%), Gaps = 10/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +D + R + + + + L +E LD ++ ++ + D + E+ Sbjct: 7 FDKVLYRHDEVRAQLSSGEGM-DSQTIQRLSKELSELDPVVTAVQAFRKAREDMVQAAEM 65 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + +E L+ Q L EAD +A +EV AG GG E+ +A Sbjct: 66 MNDPDMKDLAEEEFYALKERLPALEREVQIMLLPKDEADEKNAIIEVRAGTGGEEAALFA 125 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+A ++ E ++++D G+K A+ I G N + LK E GVHR+ R+ Sbjct: 126 AELFRMYERYAGLHGWRFEVMDVNDTGIGGVKEASATITGRNVFARLKFESGVHRVQRVP 185 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ + P + ++I++++SD R D YR+ G+GGQ VNTTDSAVR+TH Sbjct: 186 ATESQGRIHTSAATVAIMP-EAEEVDIQLNDSDLRFDVYRSQGSGGQSVNTTDSAVRVTH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+ V CQQE+SQHKNKA A +LRA+LY E ++ + A + K+++G G + Sbjct: 245 IPTGLAVACQQEKSQHKNKATALKLLRARLY--ERERSAKDAERAAARKSQVGSGDRSER 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 IR+Y P V D R N+ V+ GD LD+ ++A +A + Sbjct: 303 IRTYNF-PQGRVTDHRINMTLYKIDAVMSGDALDELVEALVAADQ 346 >gi|94676864|ref|YP_588739.1| peptide chain release factor 1 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|119361509|sp|Q1LTH5|RF1_BAUCH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|94220014|gb|ABF14173.1| peptide chain release factor 1 [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 366 Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 106/344 (30%), Positives = 174/344 (50%), Gaps = 11/344 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +R + T + + ++ ++L +E L + + + Q + I + Sbjct: 9 LKVLQERYYEVETLLGNSEVAKDRERLRILSKEYAQLTDIHTCFQHWQQVQENISITGPM 68 Query: 76 ALEEDDCSILQETSDNLQ-----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + ++Q+ + L + + + D ++EV AG GG E+ Sbjct: 69 LEDPEMHDMVQDELNKLHSLLSTLEQQLLTLLLQKDSNKDPNDERGCFIEVRAGTGGDEA 128 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY+R+AE ++ + + G G K + + NAYG LK E G HR+ Sbjct: 129 ALFAGDLFRMYSRYAEIHSWQIDVISASSGPHGGYKEIIVKMSHDNAYGQLKFESGGHRV 188 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 RI +S R HTS ++ V P + + EIS D R+DT+R+SGAGGQHVNTT+SA+ Sbjct: 189 QRIPETESQGRIHTSSCTVAVIPDILHAELPEISPEDIRVDTFRSSGAGGQHVNTTESAI 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+VV+CQ ERSQHKNKA+A +L A+L E Q R++ + + +G G Sbjct: 249 RITHLPTGLVVECQDERSQHKNKAKAMAVLSARLRAAEAQCRQQEESCM--RRNLLGSGY 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P + D R ++V++G L+ ++ + Sbjct: 307 RSDRIRTYNF-PQGRITDHRIGFTTYRLNEVIEGKLEILLQPII 349 >gi|261250316|ref|ZP_05942892.1| peptide chain release factor 2 [Vibrio orientalis CIP 102891] gi|260939432|gb|EEX95418.1| peptide chain release factor 2 [Vibrio orientalis CIP 102891] Length = 263 Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 151/257 (58%), Positives = 198/257 (77%), Gaps = 1/257 (0%) Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + ++E +F + SG+ DS+D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FKTE + Sbjct: 5 EAKLEKLEFRRMFSGDHDSSDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEVI 64 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E+ +GE AG+K AT+ I G AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP + Sbjct: 65 EVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEI 124 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DD+I+I+I+ SD RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK Q Sbjct: 125 DDNIQIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQ 184 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A LRAKL+ELE+QK+ E +K++IGWG QIRSYVL +KDLRT +E + Sbjct: 185 AMKQLRAKLFELEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNT 243 Query: 336 SDVLDGDLDDFMKATLA 352 VLDGDLD F++A+L Sbjct: 244 QAVLDGDLDKFIEASLK 260 >gi|283953774|ref|ZP_06371305.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni 414] gi|283794815|gb|EFC33553.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni 414] Length = 355 Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 114/345 (33%), Positives = 180/345 (52%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R LN+ + + ++ + L +E+++L+ + KE L + L Sbjct: 6 LDPFLKRFEELNSLLSNSDILSDISKMTTLSKEQKNLEPIVLKAKEYLKTLENIEENKAL 65 Query: 76 ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + +E + E + L D + +LE+ AG GG E+ + Sbjct: 66 LNDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDEKNIFLEIRAGTGGDEASLFV 125 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L++ Y R+AE R +K E + +G G K +L+KG AY LK E G HR+ R+ Sbjct: 126 GDLVKAYARYAENRGYKLEIVSSSEGSMGGFKEIIMLVKGTGAYSRLKYEGGTHRVQRVP 185 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P D IEIEI+ +D ++D R+SG GGQ VNTTDSAVRITH Sbjct: 186 QTESQGRVHTSAITVAVMP-EVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVRITH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV Q +SQHKNK A +L+A+LY E+Q+ E +A E+ K+++G G + Sbjct: 245 IPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQESERLAKESEARKSQVGSGDRSER 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++ DG D+ ++ + + Sbjct: 303 IRTYNF-PQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQ 346 >gi|213962214|ref|ZP_03390478.1| peptide chain release factor 1 [Capnocytophaga sputigena Capno] gi|213955220|gb|EEB66538.1| peptide chain release factor 1 [Capnocytophaga sputigena Capno] Length = 357 Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 98/350 (28%), Positives = 169/350 (48%), Gaps = 12/350 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + QR ++ P + + L +E + L + +E + + Sbjct: 1 MLDKLNIVKQRFDEVSDLIIQPDVIADQKRYIQLNKEYKDLKELMDKREEYINVTGNLAE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAGG 127 E+ + D +++ L K + + E D+ +A +E+ AG GG Sbjct: 61 AEEIIADGSDAEMVEMAKLQLDESKERLPQLEEEIKYMLIPKDPEDAKNAVMEIRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYT++ + + + T ++ ++G G K + G N YG LK E GV Sbjct: 121 DEASIFAGDLYRMYTKYCQSKGWSTSVMDFNEGTAGGYKEIIFEVTGDNVYGTLKFEAGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS +++ V P ++ ++ +D I ++G GGQ VNTT Sbjct: 181 HRVQRVPQTETQGRVHTSAATVMVLPEAEEFDVE-LNMADVNIIRTTSTGPGGQSVNTTY 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SA+++ HIPTG+ V+CQ E+SQHKN +A +LR++LYELEL K+ E K+ + Sbjct: 240 SAIQLQHIPTGIEVRCQDEKSQHKNLEKALKVLRSRLYELELAKKME--ADSARRKSMVS 297 Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 G + IR+Y P V D R + +V++GD+ + + Sbjct: 298 SGDRSAKIRTYNY-PQGRVTDHRIGLTLYDLQNVINGDVQRLIDELQLAE 346 >gi|167011047|ref|ZP_02275978.1| peptide chain release factor 2 [Francisella tularensis subsp. holarctica FSC200] Length = 248 Score = 212 bits (539), Expect = 8e-53, Method: Composition-based stats. Identities = 148/246 (60%), Positives = 188/246 (76%), Gaps = 1/246 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ D+N A+L++ +G+GGTE+QDWA ML+RMY RWA+ FK ++ DG+ AGIK Sbjct: 1 MFSGKMDANKAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGFKVTVDDVSDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 TL I+G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S+++ P VDD I+IEI+ + Sbjct: 61 GCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVFISPEVDDDIDIEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQHKN+ A L++KLYE Sbjct: 121 DLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQHKNRDNAMKQLKSKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 +ELQKR N E SK +IGWG QIRSYVL +KDLRT +E T+ VLDGDLD F Sbjct: 181 MELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIKDLRTGVENTNTQAVLDGDLDKF 239 Query: 347 MKATLA 352 ++A+L Sbjct: 240 IEASLK 245 >gi|294631400|ref|ZP_06709960.1| peptide chain release factor 1 [Streptomyces sp. e14] gi|292834733|gb|EFF93082.1| peptide chain release factor 1 [Streptomyces sp. e14] Length = 355 Score = 211 bits (538), Expect = 8e-53, Method: Composition-based stats. Identities = 116/347 (33%), Positives = 175/347 (50%), Gaps = 13/347 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + V + L K DP + + A+ L + L ++ + + D Sbjct: 1 MFEAVEELVAEHADLEKKLADPSVHADQANARKLNKRYAELTPIVATYRSWKQTGDDIET 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EL DD E + ++ + E + + +D D LE+ AGAGG ES Sbjct: 61 AREL--AADDPDFAAEVKELDKQREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP-------NAYGWLKGE 184 +A LLRMY R+AE+ +KTE ++ + E G K + +K + LK E Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVAVKARGQIEPGQGVWARLKYE 178 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ +S R HTS + + V P + +++EI+ +D RID YR+SG GGQ VN Sbjct: 179 GGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEVDVEINPNDLRIDVYRSSGPGGQSVN 237 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVRITH+PTGVV CQ E+SQ +NK QA +LR++L ++ E A S+ Sbjct: 238 TTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAEREAADARRSQV 297 Query: 305 E-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 + +IR+Y P + D R + + VLDGDL ++A Sbjct: 298 RTVDRSEKIRTYNY-PENRISDHRVGFKAYNLDQVLDGDLAAVIQAC 343 >gi|303283714|ref|XP_003061148.1| predicted protein [Micromonas pusilla CCMP1545] gi|226457499|gb|EEH54798.1| predicted protein [Micromonas pusilla CCMP1545] Length = 404 Score = 211 bits (538), Expect = 8e-53, Method: Composition-based stats. Identities = 93/348 (26%), Positives = 169/348 (48%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +++ Q L + DP + N E + L + L + + ++ + + + Sbjct: 49 LESSTQTHKELTFRLADPDVASNAKEFQKLSKALGELTSVVDQYARYKECIEELQEAKAM 108 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130 + + E + E ES+ D + LE+ AG GG E+ Sbjct: 109 VKDAAGDLEMGEMAREEATALNEEMDALEESMTMALLPRDPLDEKNIVLEIRAGTGGDEA 168 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY+R+A+ + +K L + + G K + + G + Y LK E GVHR+ Sbjct: 169 GIWAGDLWRMYSRYADSKGWKASVLTTNPADSGGYKEIVVELVGDSVYSELKWEAGVHRV 228 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R TS +++ V P D +E++I + D + T R+ GAGGQ+VN ++AV Sbjct: 229 QRVPATESQGRIQTSTATVAVMP-EVDEVEVKIDDKDIELTTARSGGAGGQNVNKVETAV 287 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ + C +ER+Q KN+ +A +LR++L+EL+++++ + + K ++G G Sbjct: 288 DLVHKPTGIRIFCTEERTQLKNRIRAMQILRSRLFELQMEEQAKE--VAGRRKAQVGSGA 345 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D R E ++GD+ + A A+++ Sbjct: 346 RSEKIRTYNYKD-NRVSDHRVG-ENFPLEGFMNGDVSPAIGACQAMEQ 391 >gi|227832889|ref|YP_002834596.1| peptide chain release factor RF-1 [Corynebacterium aurimucosum ATCC 700975] gi|262182622|ref|ZP_06042043.1| peptide chain release factor RF-1 [Corynebacterium aurimucosum ATCC 700975] gi|254790875|sp|C3PFQ4|RF1_CORA7 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|227453905|gb|ACP32658.1| peptide chain release factor RF-1 [Corynebacterium aurimucosum ATCC 700975] Length = 358 Score = 211 bits (538), Expect = 8e-53, Method: Composition-based stats. Identities = 112/346 (32%), Positives = 180/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ + + + DP + + + + L + L ++ +E+ D E+ Sbjct: 8 VDDIISEYQGIEMQMADPEVAGDQSQFRKLSKRYAELRPIVAVNEELVQARQDLADAKEM 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A E+ + + + L E E DS D +E+ AGAGG E+ +A Sbjct: 68 AYEDHEFQSEVDRLEPLVVQLEEQLADLL--APRDEHDSEDIIMEIKAGAGGEEAALFAG 125 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190 L RMY R+A+K F+ E L +++ + G+K ++ K A+ K E GVHR+ Sbjct: 126 DLARMYERFADKAGFQWEVLGLNESDLGGVKDMSISFKSKTPSRDGAWSVFKFEGGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R TS + + VYP ++ + I + D R+D YR+SG GGQ VNTTDSAV Sbjct: 186 QRVPVTESQGRIQTSAAGVLVYPEPEEIDSVNIDDKDIRVDVYRSSGKGGQGVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG+VV CQ+ERSQ +NKA+A +L+A+L ++E + RE A +S+ + Sbjct: 246 RITHLPTGLVVTCQKERSQIQNKARALQVLQARLDQMEREAREAEAGEQRASQVRTMDRS 305 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + + VLDGD+ D ++A A ++ Sbjct: 306 ERIRTYNW-PENRITDHRIGYKANNLDSVLDGDMQDLIEALQAQER 350 >gi|254850994|ref|ZP_05240344.1| peptide chain release factor 2 [Vibrio cholerae MO10] gi|258620333|ref|ZP_05715371.1| peptide chain release factor 2 [Vibrio mimicus VM573] gi|258624704|ref|ZP_05719638.1| peptide chain release factor 2 [Vibrio mimicus VM603] gi|254846699|gb|EET25113.1| peptide chain release factor 2 [Vibrio cholerae MO10] gi|258582991|gb|EEW07806.1| peptide chain release factor 2 [Vibrio mimicus VM603] gi|258587212|gb|EEW11923.1| peptide chain release factor 2 [Vibrio mimicus VM573] Length = 248 Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 153/246 (62%), Positives = 192/246 (78%), Gaps = 1/246 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ DS+D YL++ AG+GGTE+QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+K Sbjct: 1 MFSGDHDSSDCYLDLQAGSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSF+S ++YP VD++I+IEI+ + Sbjct: 61 SATVRIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK QA LRAKL+E Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LELQK+ E +K++IGWG QIRSYVL +KDLRT IE + VLDGDLD F Sbjct: 181 LELQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDKF 239 Query: 347 MKATLA 352 ++A+L Sbjct: 240 IEASLK 245 >gi|41408560|ref|NP_961396.1| peptide chain release factor 1 [Mycobacterium avium subsp. paratuberculosis K-10] gi|254774338|ref|ZP_05215854.1| peptide chain release factor 1 [Mycobacterium avium subsp. avium ATCC 25291] gi|61214644|sp|Q73X48|RF1_MYCPA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|41396918|gb|AAS04779.1| PrfA [Mycobacterium avium subsp. paratuberculosis K-10] Length = 357 Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 112/332 (33%), Positives = 165/332 (49%), Gaps = 9/332 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + + L + DP L N EA+ R L + +++ D EL Sbjct: 8 IDVLLAEHADLERRLSDPDLHSNPDEARKAGRRFARLAPIVGTYRKLMAAREDLETAREL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A ++D + ++ D++D LEV +G GG ES +A Sbjct: 68 AADDDSFTAEVADLESRVAQLDTQLTDML--APRDPHDADDIVLEVKSGEGGEESALFAA 125 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190 L RMY R+AE+ + L+ + G K ATL I+ + +K E GVHR+ Sbjct: 126 DLARMYIRYAERHGWTVTVLDEITSDLGGYKDATLSIRSKGDSADGVWSRMKFEGGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS + + VYP ++ E++I ESD RID +R+SG GGQ VNTTDSAV Sbjct: 186 QRVPVTESQGRVHTSAAGVLVYPEPEEVAEVQIDESDLRIDVFRSSGKGGQGVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTGVVV CQ ERSQ +NKA+A +L A+L + ++ A+ +S+ + Sbjct: 246 RITHLPTGVVVTCQNERSQLQNKARALQVLAARLQAMAEEQASAEASADRASQIRTVDRS 305 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 +IR+Y P + D R + + VLDG Sbjct: 306 ERIRTYNF-PENRITDHRIGFKAHNLDQVLDG 336 >gi|300812481|ref|ZP_07092907.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496542|gb|EFK31638.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 361 Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 92/345 (26%), Positives = 166/345 (48%), Gaps = 11/345 (3%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 + ++ R + DP + + + +E + + ++ + + Sbjct: 5 MVQLESLEVRYEEIQEMMADPEVIADTKRYMEITKEEADMREVVQKFRKFKADKEEIAGN 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGT 128 E+ + D +++ ++ E+ + L D D +E+ AGG Sbjct: 65 KEIIADGSDPELVEMAKMENSELEDEISQLEDEIKILMLPKDPNDDKDIIMEIRGAAGGD 124 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A LLRMY ++AE + + ++ E G K ++I G Y LK E G H Sbjct: 125 EASLFAGDLLRMYEKYAENQGWNVSIVDSEQTEVGGYKRVAIMITGNKVYSKLKYENGAH 184 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ RI +S R HTS +++ V P + ++I++ + R+D YR+SGAGGQH+N T S Sbjct: 185 RVQRIPVTESAGRVHTSTATVAVMP-EYEQVDIDLDPKEIRVDVYRSSGAGGQHINKTSS 243 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+TH+PTG+VV Q +RSQ +N+A+A +L++++Y+ + + K +G Sbjct: 244 AVRMTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQNRD--KYDAKRKNAVGT 301 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G +IR+Y P V D R + +++G+LD+ + A Sbjct: 302 GDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEVIDAL 345 >gi|255007722|ref|ZP_05279848.1| peptide chain release factor 1 [Bacteroides fragilis 3_1_12] gi|313145421|ref|ZP_07807614.1| peptide chain release factor 1 [Bacteroides fragilis 3_1_12] gi|313134188|gb|EFR51548.1| peptide chain release factor 1 [Bacteroides fragilis 3_1_12] Length = 370 Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 97/359 (27%), Positives = 168/359 (46%), Gaps = 20/359 (5%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + D V R ++T DP + + L +E + LD+ + KE L + Sbjct: 6 SILEKLDGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKDLDDLMKARKEYMQLLANIE 65 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAG 126 ++ E D + + + + + + + + + D +A LE+ G G Sbjct: 66 EAKDILSNESDTDMREMAKEEMDNSQERLPVLEEEIKLLLVPADPQDGKNAILEIRGGTG 125 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L RMY ++ E + +K E ++G G K + G N YG LK E G Sbjct: 126 GDEAAIFAGDLFRMYAKFCETKGWKMEVSSANEGAAGGYKEIICSVTGDNVYGTLKYESG 185 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ ++ R HTS +S+ V P ++ + I+E + + DT+R+ GAGGQ+VN Sbjct: 186 VHRVQRVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKV 244 Query: 247 DSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 +S VR+ +I ++++C + R Q KNK +A LR +Y+ E QK I +I Sbjct: 245 ESGVRLRYIWKNPNTGVAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDI 302 Query: 299 GESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT + G + IR+Y P + D R N + + +DGD+ + + + Sbjct: 303 ASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQECIDKLTVAE 360 >gi|313891751|ref|ZP_07825356.1| peptide chain release factor 1 [Dialister microaerophilus UPII 345-E] gi|313119745|gb|EFR42932.1| peptide chain release factor 1 [Dialister microaerophilus UPII 345-E] Length = 359 Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 105/346 (30%), Positives = 175/346 (50%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC----DNLI 71 R L K DP + +N + + +E L ++ ++ + I Sbjct: 6 LQGIENRYLTLEDKLSDPSVIENQEKWRKFSKEHAELGEIVTLYRQYKKVFETKNAALEI 65 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L + EE ++ + + I+ + DS + LE+ AG GG E+ Sbjct: 66 LNDKNQEELFELAKEDLKEAEKEIEKLEHQLHLLLIPKDPNDSRNVILEIRAGTGGDEAA 125 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + LL+MY ++AE RK++ +++++ + G + I G NAY LK E GVHR+ Sbjct: 126 LFVADLLKMYLKFAEHRKWRCSIVDMNETDLGGYREVICTIDGHNAYSILKFESGVHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S+ R HTS ++ V P + ++IEIS+ D R+D YRASGAGGQH+N T SA+R Sbjct: 186 RIPETESSGRVHTSAVTVAVLP-EAEDVDIEISKEDIRVDVYRASGAGGQHINKTSSAIR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV CQ ER Q +N+ +A +L+A+LY+ L+K + ++ K ++G G Sbjct: 245 ITHLPTGIVVTCQNERDQRQNREKAMQILKARLYDEALRK--TKSETAQNRKEQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D R + ++G ++ + + Sbjct: 303 SERIRTYNY-PQGRITDHRIGVSVYQMDSFMNGYMEPIIDRLIEAD 347 >gi|153952433|ref|YP_001398893.1| peptide chain release factor 1 [Campylobacter jejuni subsp. doylei 269.97] gi|166223543|sp|A7H5W3|RF1_CAMJD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|152939879|gb|ABS44620.1| peptide chain release factor 1 [Campylobacter jejuni subsp. doylei 269.97] Length = 355 Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 114/345 (33%), Positives = 179/345 (51%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R LN+ + ++ + L +E+++L+ + KE L + L Sbjct: 6 LDPFLKRFEELNSLLSSSDILNDISKMTTLSKEQKNLEPIVLKTKEYLKTLDNIEENKAL 65 Query: 76 ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + +E + E + L D + +LE+ AG GG E+ + Sbjct: 66 LNDPELGELAKEELKTLEELKPKLEEEIKILLLPKDLNDERNIFLEIRAGTGGDEASLFV 125 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L++ Y R+AE R +K E + +G G K +L+KG AY LK E G HR+ R+ Sbjct: 126 GDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHRVQRVP 185 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P D IEIEI+ +D ++D R+SG GGQ VNTTDSAVRITH Sbjct: 186 QTESQGRVHTSAITVAVMP-EVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVRITH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV Q +SQHKNK A +L+A+LY E+Q+ E +A E+ K+++G G + Sbjct: 245 IPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQENERLAKESEARKSQVGSGDRSER 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++ DG D+ ++ + + Sbjct: 303 IRTYNF-PQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQ 346 >gi|78780006|ref|YP_398118.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT 9312] gi|119361576|sp|Q318L3|RF1_PROM9 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|78713505|gb|ABB50682.1| bacterial peptide chain release factor 1 (bRF-1) [Prochlorococcus marinus str. MIT 9312] Length = 364 Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 100/348 (28%), Positives = 169/348 (48%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 A + L + DP + + + + + RER L+ + ++ D + L Sbjct: 10 LKTASESFENLEVQLADPDIANDPKKLESIARERSKLEPLVIDFNKLLDTDKEIEDSKNL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130 E + ++ + E + + + D LE+ AGAGG+E+ Sbjct: 70 LKENRNDKEMESLINEELINLEECKNQLIQKTTIALLPKDPRDERSVMLEIRAGAGGSEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY R+ +K + + + + + G K + +KG + Y LK E GVHR+ Sbjct: 130 CIWAGDLARMYERYGQKIGWSVKPVSASESDMGGFKELVISVKGDSVYSQLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P D +E++I +D + T R+ GAGGQ+VN ++A+ Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADPVEVKIDPTDLEVGTARSGGAGGQNVNKVETAI 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ V C QERSQ +N+ +A +LRAKLYE++L+ E A +++G G Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLK--EANAKERSQRLSQVGTGD 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + D R S +L G LD+ + A +A ++ Sbjct: 307 RSEKIRTYNFKD-NRTTDHRLG-SNFSLEPILAGQLDEVIDACIAQEQ 352 >gi|53712203|ref|YP_098195.1| peptide chain release factor 1 [Bacteroides fragilis YCH46] gi|60680383|ref|YP_210527.1| peptide chain release factor 1 [Bacteroides fragilis NCTC 9343] gi|253563758|ref|ZP_04841215.1| peptide chain release factor 1 [Bacteroides sp. 3_2_5] gi|265765536|ref|ZP_06093811.1| peptide chain release factor 1 [Bacteroides sp. 2_1_16] gi|61214601|sp|Q64XW5|RF1_BACFR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|81316547|sp|Q5LH11|RF1_BACFN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|52215068|dbj|BAD47661.1| peptide chain release factor 1 [Bacteroides fragilis YCH46] gi|60491817|emb|CAH06575.1| putative peptide chain release factor 1 [Bacteroides fragilis NCTC 9343] gi|251947534|gb|EES87816.1| peptide chain release factor 1 [Bacteroides sp. 3_2_5] gi|263254920|gb|EEZ26354.1| peptide chain release factor 1 [Bacteroides sp. 2_1_16] gi|301161917|emb|CBW21461.1| putative peptide chain release factor 1 [Bacteroides fragilis 638R] Length = 370 Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 97/359 (27%), Positives = 168/359 (46%), Gaps = 20/359 (5%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + D V R ++T DP + + L +E + LD+ + KE L + Sbjct: 6 SILEKLDGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYMQLLANIE 65 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAG 126 ++ E D + + + + + + + + + D +A LE+ G G Sbjct: 66 EAKDILSNESDADMREMAKEEMDNSQERLPVLEEEIKLLLVPADPQDGKNAILEIRGGTG 125 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L RMY ++ E + +K E ++G G K + G N YG LK E G Sbjct: 126 GDEAAIFAGDLFRMYAKFCETKGWKMEVSSANEGAAGGYKEIICSVTGDNVYGTLKYESG 185 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ ++ R HTS +S+ V P ++ + I+E + + DT+R+ GAGGQ+VN Sbjct: 186 VHRVQRVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKV 244 Query: 247 DSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 +S VR+ +I ++++C + R Q KNK +A LR +Y+ E QK I +I Sbjct: 245 ESGVRLRYIWKNPNTGVAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDI 302 Query: 299 GESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 KT + G + IR+Y P + D R N + + +DGD+ + + + Sbjct: 303 ASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQECIDKLTVAE 360 >gi|332637164|ref|ZP_08416027.1| peptide chain release factor 1 [Weissella cibaria KACC 11862] Length = 361 Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 108/352 (30%), Positives = 176/352 (50%), Gaps = 13/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL- 70 +F+ V R ++ DP + + L +E L + K +D + Sbjct: 4 IFEKVQAVVDRYDEISEMISDPDVISDTQRFMALSKEEGSLRETVETFKRYKDVVDGIEG 63 Query: 71 --ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAG 126 +L L + + + + + + E +Q + L D + +E+H AG Sbjct: 64 NEEMLNEGLGDAELEEMAKDELKELKAEKETLEEQIKILLLPKDPNDDKNIIMEIHGAAG 123 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E +A L MY R+AEK+ + E ++ + E G K L+I G N Y LK E G Sbjct: 124 GDEGALFAADLYDMYQRYAEKQGWNVEIIDENKTEIGGYKEIVLMITGNNVYSKLKFENG 183 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ +S R HTS +++ V P + ++IEI + D R+D YR+SGAGGQHVN T Sbjct: 184 AHRVQRVPETESAGRVHTSTATVGVMP-EYEDVDIEIEDKDLRVDVYRSSGAGGQHVNKT 242 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+TH+P+G+VV Q +RSQ +N+A+A +L+A++Y+ + E E KT + Sbjct: 243 SSAVRMTHLPSGIVVAMQDQRSQQQNRAKALEILKARVYDYYASQNEAE--YAEQRKTAV 300 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R + +++G+L+D + A + + Sbjct: 301 GTGDRSERIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELEDVIDALIIADQ 351 >gi|251771816|gb|EES52391.1| peptide chain release factor 1 [Leptospirillum ferrodiazotrophum] Length = 362 Score = 211 bits (538), Expect = 9e-53, Method: Composition-based stats. Identities = 110/347 (31%), Positives = 183/347 (52%), Gaps = 14/347 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R L+ K P + ++ + L ++ L + + + + L Sbjct: 15 LQSMRDRFDELSGKMASPEIARSPDLYRKLAMDQAELAPVVELYDQWKRLRKEQEEL--- 71 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQ 131 L DD + + S +R++ +E + L + D + ++E+ AGAGG E+ Sbjct: 72 DLIRDDPQMAELVSGEDRRLREVLEGTELRLVDAILPKDQRDERNLFIEIRAGAGGEEAA 131 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R+ E++ F+ E +E ++ + G K + ++G NA+ LK E GVHR+ Sbjct: 132 LFAAELGRMYLRFVERQGFRAEVMESNETDIGGSKEFIIYVQGRNAFSRLKYESGVHRVQ 191 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS ++ + P +E++I + D RIDT+ +SGAGGQ VNTT SAVR Sbjct: 192 RVPVTEAGGRIHTSTVTVAILP-EASEVEVDIEQKDLRIDTFCSSGAGGQSVNTTYSAVR 250 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIP+G+VV CQ ERSQ KN+ +A ++LR++L E E+ ++ + I KT +G G Sbjct: 251 ITHIPSGIVVSCQDERSQLKNRTKAMSVLRSRLLEQEVSRQNQE--IASQRKTLVGSGDR 308 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + V++G+L+ + A A + Sbjct: 309 SERIRTYNF-PQNRVTDHRIGLTLYQLDRVMEGELEPLVDALRAHDR 354 >gi|294678208|ref|YP_003578823.1| peptide chain release factor 1 [Rhodobacter capsulatus SB 1003] gi|294477028|gb|ADE86416.1| peptide chain release factor 1 [Rhodobacter capsulatus SB 1003] Length = 351 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 120/344 (34%), Positives = 177/344 (51%), Gaps = 12/344 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL-E 74 R FL K + E L RE L ++ I + L D Sbjct: 7 LAQITARFEFLEAKL---NTALPPAEIATLSREYSDLRPVVTEIAAYRQSLDDLAEAEGW 63 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 L+ E +E RI + + L AD+ A LE+ G GG E+ +A Sbjct: 64 LSDPEMKTLAEEELPRLKARIPAMEQALRLALLPKDAADARPAILEIRPGTGGEEAALFA 123 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 + L RMY R AEK ++ E LE E G+K A I+G + LK E GVHR+ R+ Sbjct: 124 HDLWRMYERHAEKMGWRFERLEFTATELGGVKEAMARIEGEGVFARLKYESGVHRVQRVP 183 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS +++ V P + ++I+I +D RIDT R+SGAGGQHVNTTDSAVRITH Sbjct: 184 ETEAGGRIHTSAATVAVLP-EAEEVDIDIPAADIRIDTMRSSGAGGQHVNTTDSAVRITH 242 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG++V E+SQH+N+A A +LRA+LYE+E ++ E+ ++++G G + Sbjct: 243 LPTGIIVTSS-EKSQHQNRANAMAVLRARLYEIERERL--ATERAENRRSQVGSGDRSER 299 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ + +L GDL + + A +A + Sbjct: 300 IRTYNF-PQGRMTDHRINLTLYALPQILAGDLGEVIDALVAHDQ 342 >gi|126728795|ref|ZP_01744610.1| peptide chain release factor 1 [Sagittula stellata E-37] gi|126710725|gb|EBA09776.1| peptide chain release factor 1 [Sagittula stellata E-37] Length = 349 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 110/344 (31%), Positives = 173/344 (50%), Gaps = 14/344 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 RL ++ + +++ L RE L + I E + D + Sbjct: 7 LHQIKARLEYVEAQMATGG--GDIV---ALGREFAELSPVVRQIAEWERLTSDIEEAEAM 61 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + ++ +E +L+ E Q L AD+ A LE+ G GG E+ +A Sbjct: 62 LADPEMRALAEEELPDLRAALPAAEKAVQLALLPKDAADARPAVLEIRPGTGGDEAALFA 121 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+AE ++ + +E E G+K + + G + LK E GVHR+ R+ Sbjct: 122 GDLARMYQRYAEAHGWRWDVIEEQMSELGGVKELVVRVVGEGVFARLKFESGVHRVQRVP 181 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P + ++I I+ +D RIDT R+SGAGGQHVNTTDSAVRITH Sbjct: 182 ETESGGRIHTSAATVAVLP-EAEEVDIAIAAADIRIDTMRSSGAGGQHVNTTDSAVRITH 240 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV E+SQH+N+ A +LR +L++LE K A K ++G G + Sbjct: 241 LPTGIVVTSS-EKSQHRNREIAMQVLRTRLFDLERSK--ADAARSADRKAQVGSGDRSER 297 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R + ++ GDLD+ + A ++ + Sbjct: 298 IRTYNF-PQGRMTDHRIGLTLYKLDAIMGGDLDEIIDALISEHQ 340 >gi|50365449|ref|YP_053874.1| peptide chain release factor 1 [Mesoplasma florum L1] gi|61214613|sp|Q6F0I3|RF1_MESFL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|50364005|gb|AAT75990.1| peptide chain release factor 1 [Mesoplasma florum L1] Length = 363 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 114/347 (32%), Positives = 176/347 (50%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72 + +R+ ++ + + +V + L +ER +L + E + + D + Sbjct: 9 LETMQKRVDQIDKDLQSEEIVSDVKKMLELNKERANLIEVVEKFIEYKTIIQSIADAKEI 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L + + + + + + + L D + +E+ AGG E+ Sbjct: 69 LGNEKDAEMIELAKMELSENEDAVEPIVAIIEELLLPKDPNDDKNVIVEIRGAAGGDEAN 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY +AE + +K L+ + E G + ++KG Y LK E G HR+ Sbjct: 129 IFAGDLLRMYKLYAETQNWKITMLDANSSEAGGFSQVSFMVKGDRVYSKLKFESGAHRVQ 188 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R TS +++ V P +EIEI SD RIDTYR+SGAGGQHVNTTDSAVR Sbjct: 189 RVPKTEAKGRIQTSTATVAVLP-EMSDVEIEIKNSDLRIDTYRSSGAGGQHVNTTDSAVR 247 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIPTGVV Q RSQH NK A MLRA++YE EL+K++ A+ + K +G G Sbjct: 248 ITHIPTGVVAASQDGRSQHDNKDIAMTMLRARIYEAELEKQQAEAD--ATRKNAVGTGAR 305 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + V++G +DDF+ A + ++ Sbjct: 306 SEKIRTYNY-PQNRVTDHRVGLTLNKLDQVMEGKIDDFIIALVNDEQ 351 >gi|254387523|ref|ZP_05002762.1| peptide chain release factor 1 [Streptomyces clavuligerus ATCC 27064] gi|294815090|ref|ZP_06773733.1| Peptide chain release factor 1 [Streptomyces clavuligerus ATCC 27064] gi|326443452|ref|ZP_08218186.1| peptide chain release factor 1 [Streptomyces clavuligerus ATCC 27064] gi|197701249|gb|EDY47061.1| peptide chain release factor 1 [Streptomyces clavuligerus ATCC 27064] gi|294327689|gb|EFG09332.1| Peptide chain release factor 1 [Streptomyces clavuligerus ATCC 27064] Length = 356 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 119/347 (34%), Positives = 176/347 (50%), Gaps = 13/347 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ ++ + + L + DP + + A+ L + L + + + D Sbjct: 1 MFEAVEDLIGEHAGLEKQLADPSVHADQANARKLSKRYAELTPIVGTYRSWKLTGEDIDT 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EL DD E + QR + E + + +D D LEV AGAGG ES Sbjct: 61 AREL--AADDPDFAAEVKELEQRREELTEKLRLLLVPRDPSDDKDVILEVKAGAGGDESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-------AYGWLKGE 184 +A LLRMY R+AE+ +KTE + + E G K + +K + LK E Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIINSTESELGGYKDVQVAVKTKGNAEPGQGVWARLKYE 178 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ +S R HTS + + V P + I++EI+ +D RID YR+SG GGQ VN Sbjct: 179 GGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEIDVEINPNDLRIDVYRSSGPGGQSVN 237 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVRITH+PTGVV CQ E+SQ +NK QA +LR++L ++ E+ A S+ Sbjct: 238 TTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAEKEAADARRSQV 297 Query: 305 E-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 + +IR+Y P + D R + + VLDGDLD ++A Sbjct: 298 RTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLDAVIQAC 343 >gi|149192200|ref|ZP_01870417.1| bacterial peptide chain release factor 2 (RF-2) [Vibrio shilonii AK1] gi|148833958|gb|EDL50978.1| bacterial peptide chain release factor 2 (RF-2) [Vibrio shilonii AK1] Length = 248 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 150/246 (60%), Positives = 192/246 (78%), Gaps = 1/246 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ D++D Y+++ +G+GGTE+QDW NM+LRMY RWAE + FKTE +E+ +GE AG+K Sbjct: 1 MFSGDHDASDCYIDLQSGSGGTEAQDWTNMMLRMYLRWAEAKGFKTEVIEVSEGEVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 AT+ I G AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S +VYP +DD+I+I+I+ S Sbjct: 61 GATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFVYPEIDDNIQIDINPS 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVNTT+SAVRITH+PT +VVQCQ +RSQHKNK QA LRAKL+E Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLRAKLFE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ELQK+ E +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F Sbjct: 181 FELQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKF 239 Query: 347 MKATLA 352 ++A+L Sbjct: 240 IEASLK 245 >gi|163739713|ref|ZP_02147121.1| peptide chain release factor 1 [Phaeobacter gallaeciensis BS107] gi|161386943|gb|EDQ11304.1| peptide chain release factor 1 [Phaeobacter gallaeciensis BS107] Length = 351 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 117/344 (34%), Positives = 174/344 (50%), Gaps = 12/344 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +QR +L + ++ L +E L I + LCD ++ Sbjct: 7 LEQILQRFQYLEAAMAEGVAGADIA---ALAKEYSDLRPVAEQITAYRRLLCDLEEAEQM 63 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + +E L+ Q L EAD+ A LE+ G GG E+ +A Sbjct: 64 LADPDMAELAEEELPQLRAALPEAEHALQLALLPRDEADARPAMLEIRPGTGGDEAALFA 123 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE R + E +E E G+K +KG N + LK E GVHR+ R+ Sbjct: 124 GDLLRMYQRYAEARGWGFEIIEEQTTELGGLKEVVAHVKGENVFARLKYESGVHRVQRVP 183 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P + +++ I D RIDT RASGAGGQHVNTTDSAVRITH Sbjct: 184 VTESGGRIHTSAATVAVLP-EAEDVDLRIDPGDLRIDTMRASGAGGQHVNTTDSAVRITH 242 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG++V E+SQH+N+ A ++R +LY+LE Q+ + +++G G + Sbjct: 243 IPTGIIV-VSSEKSQHRNREIAMQVMRTRLYDLERQRIDSER--SADRASQVGSGDRSER 299 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++ GDLD+ + A A + Sbjct: 300 IRTYNF-PQGRMSDHRINLTLYKLDQIMQGDLDEIIDALTADDQ 342 >gi|161507266|ref|YP_001577220.1| peptide chain release factor 1 [Lactobacillus helveticus DPC 4571] gi|260102570|ref|ZP_05752807.1| peptide chain release factor RF1 [Lactobacillus helveticus DSM 20075] gi|172048215|sp|A8YUJ1|RF1_LACH4 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|160348255|gb|ABX26929.1| Peptide chain release factor 1 [Lactobacillus helveticus DPC 4571] gi|260083597|gb|EEW67717.1| peptide chain release factor RF1 [Lactobacillus helveticus DSM 20075] Length = 362 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 102/347 (29%), Positives = 170/347 (48%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V L DP + + + +E L + K+ ++ + E+ Sbjct: 8 LEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKEDKKEIADNKEI 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D +++ + I+ E+ + L D D +E+ AGG E+ Sbjct: 68 IANETDSDLIEMAKEENAEIEKEIPELEDQIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY ++AE++ +K ++ E G K ++I G Y LK E G HR+ Sbjct: 128 LFAGDLLRMYEKYAERQNWKVSMIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ V P + ++I+I D R+D YR+SGAGGQH+N T SAVR Sbjct: 188 RIPVTESQGRVHTSTATVAVMP-EYEQVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q +RSQ +N+ +A +L++++Y+ + + A K IG G Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQ--AKYDAKRKNAIGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + V++G+LD+ + A + + Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQ 350 >gi|332877766|ref|ZP_08445507.1| peptide chain release factor 1 [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684346|gb|EGJ57202.1| peptide chain release factor 1 [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 357 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 97/350 (27%), Positives = 169/350 (48%), Gaps = 12/350 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + QR ++ P + + L +E + L + +E + Sbjct: 1 MLDKLNIVKQRFDEISDLIIQPDIIADQKRYIQLNKEYKDLKELMDKREEYITVTGNLSE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAGG 127 E+ + D +++ L+ K + + E D+ +A +E+ AG GG Sbjct: 61 AEEIIADGSDPEMVEMAKLQLEESKERLPQLEEEIKYMLIPKDPEDAKNAVMEIRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYT++ + + + T ++ ++G G K + G N YG LK E GV Sbjct: 121 DEASIFAGDLYRMYTKYCQSKGWSTSVMDFNEGTAGGYKEIIFEVTGDNVYGTLKFEAGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS +++ V P ++ + +D +I ++G GGQ VNTT Sbjct: 181 HRVQRVPQTETQGRVHTSAATVIVLPEAEEFDVE-LDMADVKIIRTTSTGPGGQSVNTTY 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SA+++ HIPTG+ V+CQ E+SQHKN +A +LR++LYE+EL K+ E K+ + Sbjct: 240 SAIQLQHIPTGIEVRCQDEKSQHKNLDKALKVLRSRLYEMELAKKME--ADSARRKSMVS 297 Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 G + IR+Y P V D R + +V++GD+ + + Sbjct: 298 SGDRSAKIRTYNY-PQGRVTDHRIGLTLYDLQNVINGDVQRLIDELQLAE 346 >gi|323466867|gb|ADX70554.1| Peptide chain release factor 1 [Lactobacillus helveticus H10] Length = 362 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 101/347 (29%), Positives = 170/347 (48%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V L DP + + + +E L + K+ ++ + E+ Sbjct: 8 LEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKEDKKEIADNKEI 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D +++ + I+ E+ + L D D +E+ AGG E+ Sbjct: 68 IANETDSDLIEMAKEENAEIEKEIPELEDQIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY ++AE++ +K ++ E G K ++I G Y LK E G HR+ Sbjct: 128 LFAGDLLRMYEKYAERQNWKVSMIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ V P + ++I+I D R+D YR+SGAGGQH+N T SAVR Sbjct: 188 RIPVTESQGRVHTSTATVAVMP-EYEQVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q +RSQ +N+ +A +L++++Y+ + + A K +G G Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQ--AKYDAKRKNAVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + V++G+LD+ + A + + Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQ 350 >gi|255534225|ref|YP_003094596.1| Peptide chain release factor 1 [Flavobacteriaceae bacterium 3519-10] gi|255340421|gb|ACU06534.1| Peptide chain release factor 1 [Flavobacteriaceae bacterium 3519-10] Length = 361 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 91/346 (26%), Positives = 163/346 (47%), Gaps = 12/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + QR + + P + + + L +E L +S + + E+ Sbjct: 9 LEAIKQRYNEVADLIIQPDIISDQKKYSALNKEYSDLGKIVSVFDQYTQAINSIAESDEI 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 + D ++ ++ + E AD + +E+ AG GG E+ Sbjct: 69 IADGSDKEFVEMAKMEKNEALEKIPQIEEELKVLLIPKDPADDKNVIVELRAGTGGDEAA 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + + R Y + + + +K E + ++ + G K L ++G YG +K E GVHR+ Sbjct: 129 IFVEDVYRAYAMFFKTKGWKHEITDANEASK-GYKELILKVEGEGVYGIMKFESGVHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS ++ V P + ++ E++ +D + T R+ GAGGQ+VN ++ V+ Sbjct: 188 RVPETESQGRVHTSAITVAVLP-EAEEVDFELNPADIEMQTSRSGGAGGQNVNKVETKVQ 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +TH P+G+VV CQQ RSQ N+ A MLR KLY++ELQ+ + +I KT + G + Sbjct: 247 LTHKPSGMVVVCQQARSQLANRELAMEMLRTKLYDIELQRVQ--GDIAAQRKTMVSTGDR 304 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 I++Y P V D R N + ++GD+ + + A + + Sbjct: 305 SAKIKTYNY-PQGRVTDHRVNKSVYNLDAYMNGDIQEMIDAVIMAE 349 >gi|1526559|dbj|BAA08795.1| peptide termination factor [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 370 Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats. Identities = 117/347 (33%), Positives = 181/347 (52%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---LCDNLIL 72 + +RL + ED ++ +++ + L +E+ +L+ + E + + D + Sbjct: 9 LETMQKRLFQIQKDLEDENILKDIKKFTELNKEKANLEEVVEKFVEYKKAVDHIKDAKAI 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LE + + + + D ++ + L D + +E+ AGG E+ Sbjct: 69 LENEKDSELIELAKIELDENNDKVEHLQQVIEEMLLPKDPNDEKNVIIEIRGAAGGDEAN 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY +AE + +K LE GE G +IKG Y LK E G HR+ Sbjct: 129 IFAGDLLRMYKLYAETQNWKINILEASLGEAGGYSQVVFMIKGDRVYSKLKFESGAHRVQ 188 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R TS +++ V P +EIEI +D RIDTYRASGAGGQHVNTTDSAVR Sbjct: 189 RVPKTEAKGRIQTSTATVAVLP-EMSEVEIEIRSNDLRIDTYRASGAGGQHVNTTDSAVR 247 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV Q RSQH NK A MLRAK+YE E++K++ A+ + K +G G Sbjct: 248 ITHLPTGIVVTSQDGRSQHDNKDIAMTMLRAKVYEAEVEKQQAQAD--ATRKNAVGTGAR 305 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + R+Y P V D R + V++G++D+F+ A + ++ Sbjct: 306 SEKFRTYNY-PQNRVTDHRVGLTLNKLDQVMEGNIDEFIIALINEEQ 351 >gi|116620705|ref|YP_822861.1| peptide chain release factor 2 [Candidatus Solibacter usitatus Ellin6076] gi|116223867|gb|ABJ82576.1| bacterial peptide chain release factor 2 (bRF-2) [Candidatus Solibacter usitatus Ellin6076] Length = 322 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 161/310 (51%), Positives = 210/310 (67%), Gaps = 2/310 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M++R+ L+ A++ +I+ D + EL + + + +L+ +E + Sbjct: 1 MQDRKRLEEAVANDDQIRALTDDLDTMFEL--AREGEPVQADIERDLKPYSELLERLETA 58 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LLSGE D+ A + +H GAGGTESQDWA MLLRMY RWAE+ KF T + +GE AGI Sbjct: 59 MLLSGENDARSAIVTIHPGAGGTESQDWAEMLLRMYLRWAEREKFATVITDRLEGEGAGI 118 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KS T + G NAYG L+ E GVHRLVRISP+D+N+RRHTSF+S++V+P VDD I+I+I + Sbjct: 119 KSVTFEVNGENAYGLLQSEIGVHRLVRISPFDANARRHTSFASVFVFPQVDDEIKIDIQD 178 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D RIDT+RASGAGGQHVN TDSAVRITH PTG+VVQCQ ERSQHKN+A A LRA LY Sbjct: 179 KDLRIDTFRASGAGGQHVNMTDSAVRITHFPTGIVVQCQNERSQHKNRATAMKQLRACLY 238 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E EL+K+ E SK EI +G QIR+YVL PY++VKDLR+ + VL+G LD Sbjct: 239 EHELEKKRAETRETEDSKLEINFGSQIRNYVLAPYRLVKDLRSKLALGDVDRVLEGGLDP 298 Query: 346 FMKATLAIKK 355 + + L +K Sbjct: 299 LIHSYLVWRK 308 >gi|218263804|ref|ZP_03477780.1| hypothetical protein PRABACTJOHN_03470 [Parabacteroides johnsonii DSM 18315] gi|218222477|gb|EEC95127.1| hypothetical protein PRABACTJOHN_03470 [Parabacteroides johnsonii DSM 18315] Length = 369 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 93/353 (26%), Positives = 158/353 (44%), Gaps = 18/353 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V R ++T DP++ + L +E + L+ I KE L + Sbjct: 11 LEGLVSRFEEVSTLITDPNVIADQKRYVKLTKEYKELNEIIKARKEYMQCLNGLEEARLM 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFES---LLSGEADSNDAYLEVHAGAGGTESQD 132 E D + E ++ + + D +A +E+ G GG E+ Sbjct: 71 MAETDPEMKEIAREEAAACEARIPELEEEIKLLLVPADPQDDKNAIVEIRGGTGGDEAAL 130 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY ++ E + +K +G G K + G YG LK E GVHR+ R Sbjct: 131 FAGDLYRMYVKYCEMKGWKVALSSCSEGAAGGFKEIIFTVSGEKVYGTLKYESGVHRVQR 190 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ V P D+ I+E + + DT+R+ GAGGQ+VN +S VR+ Sbjct: 191 VPATETQGRVHTSAATVAVLPEADEFDVE-INEGEIKWDTFRSGGAGGQNVNKVESGVRL 249 Query: 253 THIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 ++ ++++C + R Q KNK +A LR+ +Y+ E QK + +I KT Sbjct: 250 RYVWKNPNTGVSEEILIECTETRDQPKNKERALTRLRSFIYDKEHQKYLD--DIANKRKT 307 Query: 305 EIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + G + IR+Y P + D R N + S +DGD+ + + + Sbjct: 308 MVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDGDIQGCLDQLIVAE 359 >gi|323497777|ref|ZP_08102791.1| peptide chain release factor RF-2 [Vibrio sinaloensis DSM 21326] gi|323317124|gb|EGA70121.1| peptide chain release factor RF-2 [Vibrio sinaloensis DSM 21326] Length = 248 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 148/246 (60%), Positives = 192/246 (78%), Gaps = 1/246 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ D++D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FKTE +E+ +GE AG+K Sbjct: 1 MFSGDHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEVIEVSEGEVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 AT+ I G AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I+I+I+ S Sbjct: 61 GATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNIQIDINPS 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK QA LRAKL+E Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LE+QK+ E +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F Sbjct: 181 LEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKF 239 Query: 347 MKATLA 352 ++A+L Sbjct: 240 IEASLK 245 >gi|296387792|ref|ZP_06877267.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa PAb1] Length = 248 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 156/247 (63%), Positives = 193/247 (78%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SGE D N+AYL++ AG+GGTE+QDWANMLLRMY RWA+K F +E+ +GE AGIK Sbjct: 1 MFSGEMDPNNAYLDIQAGSGGTEAQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 AT+ IKG A+GWL+ E GVHRLVR SP+DS +RRHTSF++++V P +DD+IEIEI+ + Sbjct: 61 GATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYR+SGAGGQHVNTTDSAVRITH+PT VV CQ ERSQH NK A MLRAKLYE Sbjct: 121 DLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LE+QKR + E SK++IGWG QIRSYVL +KDLRT IE++ VLDGDLD++ Sbjct: 181 LEMQKRTAASQALEDSKSDIGWGHQIRSYVLD-QSRIKDLRTGIERSDCDKVLDGDLDEY 239 Query: 347 MKATLAI 353 ++A+L Sbjct: 240 LEASLKQ 246 >gi|300781808|ref|YP_003778203.1| hypothetical protein PSPTO_1500 [Pseudomonas syringae pv. tomato str. DC3000] gi|290758052|gb|ADD53002.1| protein of unknown function [Pseudomonas syringae pv. tomato str. DC3000] Length = 293 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 164/290 (56%), Positives = 215/290 (74%), Gaps = 1/290 (0%) Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D LL ++ EE+D + + + + ++R++ +E +F + SGE D N+AYL++ A Sbjct: 3 SGLVDAKDLLLMSAEEEDQAAVDDVAAEVERLRASLEKLEFRRMFSGEMDPNNAYLDIQA 62 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTE+QDWAN+LLRMY RWA+KR F +E+ GE AGIK AT+ IKG A+GWL+ Sbjct: 63 GSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRT 122 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ SD RIDTYR+SGAGGQHV Sbjct: 123 EIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRSSGAGGQHV 182 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSAVRITH+PT VV CQ ERSQH NK A MLRA+LYE E+QKR + E +K Sbjct: 183 NTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTK 242 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 ++IGWG QIRSYVL +KDLRTNIE++ VLDGD+D+++ A+L Sbjct: 243 SDIGWGHQIRSYVLD-ASRIKDLRTNIERSDCDKVLDGDIDEYLIASLKQ 291 >gi|91784239|ref|YP_559445.1| peptide chain release factor 2 [Burkholderia xenovorans LB400] gi|91688193|gb|ABE31393.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia xenovorans LB400] Length = 280 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 151/266 (56%), Positives = 203/266 (76%), Gaps = 1/266 (0%) Query: 88 TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 + Q I+ V +F + + AD N+A+L++ AGAGGTE+ DWA MLLR Y R+ E+ Sbjct: 14 CESDAQGIEQRVADMEFRRMFANPADPNNAFLDIQAGAGGTEACDWAAMLLRQYLRYCER 73 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 + FKTE LE DG+ AGIK+AT+ I+G AYG+L+ E GVHRLVR SP+DS+ RHTSFS Sbjct: 74 KGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHRLVRKSPFDSSGGRHTSFS 133 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 S++VYP +DDSIE++I+ +D RIDTYRASGAGGQH+N TDSAVRITH+P+G+VVQCQ +R Sbjct: 134 SVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTDSAVRITHLPSGIVVQCQNDR 193 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQH+N+A+A ML+++LYE E++KR+ + E+ KT++GWG QIRSYVL +KDLR Sbjct: 194 SQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAGKTDVGWGHQIRSYVLD-NSRIKDLR 252 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAI 353 TN+E ++ VLDGDLD F+ A+L Sbjct: 253 TNVEISNTKSVLDGDLDPFISASLKQ 278 >gi|323491501|ref|ZP_08096683.1| peptide chain release factor RF-2 [Vibrio brasiliensis LMG 20546] gi|323314255|gb|EGA67337.1| peptide chain release factor RF-2 [Vibrio brasiliensis LMG 20546] Length = 248 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 148/246 (60%), Positives = 192/246 (78%), Gaps = 1/246 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ DS+D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FKTE +E+ +GE AG+K Sbjct: 1 MFSGDHDSSDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEVIEVSEGEVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 AT+ I G AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I+I+I+ + Sbjct: 61 GATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNIQIDINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK QA LRAKL+E Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LE+QK+ E +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F Sbjct: 181 LEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKF 239 Query: 347 MKATLA 352 ++A+L Sbjct: 240 IEASLK 245 >gi|212697040|ref|ZP_03305168.1| hypothetical protein ANHYDRO_01605 [Anaerococcus hydrogenalis DSM 7454] gi|212675815|gb|EEB35422.1| hypothetical protein ANHYDRO_01605 [Anaerococcus hydrogenalis DSM 7454] Length = 238 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 135/236 (57%), Positives = 174/236 (73%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 + +HAGAGG E+ DWA ML+RMYTR+ E+R FK + ++++ E GIKSAT+ IKG AY Sbjct: 1 MVIHAGAGGLEATDWAEMLMRMYTRFFERRNFKFDITDLNNEEAGGIKSATIHIKGSFAY 60 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 G+LKGE+GVHRLVRISP+DS+ RRHTSF+SI ++P ++D + +EI D RIDTYRASGA Sbjct: 61 GYLKGERGVHRLVRISPFDSSKRRHTSFASIDIFPELNDDMSVEIDPKDLRIDTYRASGA 120 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVN TDSAVRITHIPTGV+ Q ERSQ +NK A +L AKL +++ ++ E Sbjct: 121 GGQHVNKTDSAVRITHIPTGVIASSQAERSQTQNKETAMKLLLAKLTQIKEEEHREKIED 180 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + + T+I WG QIRSYV PY +VKD RTN E + V+DGD+D F+ A LA K Sbjct: 181 IQGNYTQIAWGSQIRSYVFHPYTLVKDHRTNFEVGNVESVMDGDIDGFIDAYLANK 236 >gi|163840178|ref|YP_001624583.1| peptide chain release factor 1 [Renibacterium salmoninarum ATCC 33209] gi|189039986|sp|A9WNB3|RF1_RENSM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|162953654|gb|ABY23169.1| peptide chain release factor 1 [Renibacterium salmoninarum ATCC 33209] Length = 360 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 106/352 (30%), Positives = 173/352 (49%), Gaps = 15/352 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + + L + DP + + A+ L R L + ++Q D Sbjct: 1 MFESIQGLLDEHADLQIRLSDPAVHADQSLARKLGRRYAELSTIVEGYHQVQQLSDDLAA 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E+A E+ + + + E + + D D LEV AG GG ES Sbjct: 61 AKEMASEDSEFAAEVPVLEEQLAH--AQEKLRRLLIPRDPDDGRDVILEVKAGEGGDESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI------KGPNAYGWLKGEQ 185 +A L+RMY+R+AE + +K E + + + G K + + + LK E Sbjct: 119 LFAADLVRMYSRYAESKGWKIEVISATESDLGGYKDIQIAVKGRSNDPAEGVFAALKFEG 178 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ +S R HTS + + V+P VD+ E+EIS++D +ID YR+SG GGQ VNT Sbjct: 179 GVHRVQRVPVTESQGRIHTSAAGVLVFPEVDEPEEVEISQNDLKIDVYRSSGPGGQSVNT 238 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITH PTG+VV Q E+SQ +N+ +LRA++ + + + + K++ Sbjct: 239 TDSAVRITHFPTGIVVAMQNEKSQLQNREAGMRVLRARILAHQQELIDAENSAV--RKSQ 296 Query: 306 I---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 I +IR+Y P + D RT + + V++GDL +++ + + Sbjct: 297 IRTMDRSERIRTYNF-PENRIADHRTGYKSYNLDAVMNGDLGPVIQSAIEMD 347 >gi|262163922|ref|ZP_06031661.1| peptide chain release factor 2 [Vibrio mimicus VM223] gi|262172260|ref|ZP_06039938.1| peptide chain release factor 2 [Vibrio mimicus MB-451] gi|261893336|gb|EEY39322.1| peptide chain release factor 2 [Vibrio mimicus MB-451] gi|262027450|gb|EEY46116.1| peptide chain release factor 2 [Vibrio mimicus VM223] Length = 263 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 155/253 (61%), Positives = 195/253 (77%), Gaps = 1/253 (0%) Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159 E +F + SG+ DS+D YL++ AG+GGTE+QDW +MLLRMY RWA+ + FKTE +E+ + Sbjct: 9 EQLEFRRMFSGDHDSSDCYLDLQAGSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSE 68 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 G+ AG+KSAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSF+S ++YP VD++I Sbjct: 69 GDVAGLKSATVRIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENI 128 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 +IEI+ +D RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK QA Sbjct: 129 DIEINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQ 188 Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 LRAKL+ELELQK+ E +K++IGWG QIRSYVL +KDLRT IE + VL Sbjct: 189 LRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGIENRNTQAVL 247 Query: 340 DGDLDDFMKATLA 352 DGDLD F++A+L Sbjct: 248 DGDLDKFIEASLK 260 >gi|160916055|ref|ZP_02078262.1| hypothetical protein EUBDOL_02082 [Eubacterium dolichum DSM 3991] gi|158431779|gb|EDP10068.1| hypothetical protein EUBDOL_02082 [Eubacterium dolichum DSM 3991] Length = 357 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 109/346 (31%), Positives = 174/346 (50%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72 + V R +N P + + L RE+ L + E + L D L Sbjct: 8 LEGMVNRYHEINEMMMSPEIVSDSKMLAKLGREQADLVQVVETYTEYKNSVQALEDAKAL 67 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L +E E + +I+ + + + DS++A +E+ AGG E Sbjct: 68 LMEDDKEIKEMAKMEIEELEPKIEGYLGKLEILLIPKDPNDSHNAIVEIRGAAGGDEGNI 127 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AE + ++ E +E+ D E G + ++KG YG LK E G HR+ R Sbjct: 128 FAGDLYRMYSKYAESQGWRIEIIEMDDCEAGGFSLVSFMVKGDGVYGRLKFESGSHRVQR 187 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS +++ V P ++ + +I +D I+T RASGAGGQH+N TDSAVRI Sbjct: 188 VPKTESQGRIHTSTATVLVTP-EIEAEDFDIDMNDLEIETMRASGAGGQHINKTDSAVRI 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 H PTG+VV+CQ RSQH+N+A A +R+++YE +K EE + +++IG G Sbjct: 247 VHKPTGIVVKCQDGRSQHENRATALMTIRSRVYEEHQRKLEEEQGV--ERRSKIGTGDRA 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R +++G + D + A + + Sbjct: 305 EKIRTYNY-PQNRVTDHRIGYNVNQLDRIMEGRMQDLLDALCSADQ 349 >gi|197104299|ref|YP_002129676.1| peptide chain release factor RF-1 [Phenylobacterium zucineum HLK1] gi|196477719|gb|ACG77247.1| peptide chain release factor RF-1 [Phenylobacterium zucineum HLK1] Length = 377 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 116/347 (33%), Positives = 183/347 (52%), Gaps = 15/347 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + R + + + E L +E L ++ ++ + L E+ Sbjct: 27 LDQVLDRFREIEARMGA---ASDGAEIVRLSKEHAELKPVADAVQALERARAEQPELEEM 83 Query: 76 ALEED-DCSILQETSDNLQRIKLEVEYKQ--FESLLSGEADSNDAYLEVHAGAGGTESQD 132 A D + + L + +L ++ + ++ A LEV AG GG E+ Sbjct: 84 AASGDAEMAALARDELEALKERLPELEREVALLLAPKDKDENASAILEVRAGTGGDEAAL 143 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY R+A+ R ++ E I +G+ G K I G +G LK E GVHR+ R Sbjct: 144 FAGDLFRMYQRYAQTRGWRVEIDSISEGDAGGYKEIIASITGEGVFGRLKFESGVHRVQR 203 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ V P + +EIE+ + D RIDTYR+SGAGGQHVN TDSAVRI Sbjct: 204 VPATEAQGRIHTSAATVAVLP-EVEDVEIEVRDQDIRIDTYRSSGAGGQHVNKTDSAVRI 262 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV E+SQH+N+A+A +L+A+LY E Q+ + ES K+++G G Sbjct: 263 THLPTGIVVTSS-EKSQHQNRARAMKVLKARLY--EQQREALDSARAESRKSQVGSGDRS 319 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 +IR+Y P V D R N+ + + V++G+ LDD ++ +A + Sbjct: 320 ERIRTYNF-PQGRVTDHRINLTLYNLAKVMEGEALDDVIEPLIAEDQ 365 >gi|15890803|ref|NP_356475.1| peptide chain release factor 1 [Agrobacterium tumefaciens str. C58] gi|22096038|sp|Q8U8B8|RF1_AGRT5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|15159088|gb|AAK89260.1| peptide chain release factor 1 [Agrobacterium tumefaciens str. C58] Length = 360 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 115/344 (33%), Positives = 180/344 (52%), Gaps = 18/344 (5%) Query: 18 NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 +R + + P L E L+ + I++ + + + L L Sbjct: 11 ELERRFGEIEARMSAGPA----ADVYVKLASEYSELEPVVKKIRDYEKAISEAADLEALL 66 Query: 77 LEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ++ +++ ++ RI+ + Q L AD A LE+ AG GG+E+ Sbjct: 67 ADKTTDKDMRDLAEMELPEVETRIRELEKDMQVLLLPKDAADEKSAILEIRAGTGGSEAA 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R+A + +K E L +GE G K I G + LK E GVHR+ Sbjct: 127 LFAGDLFRMYERFAATKGWKVEVLSASEGEAGGYKEIIATITGRGVFSKLKFESGVHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +++ R HTS +++ V P + I++EI D RIDT RASGAGGQHVNTTDSAVR Sbjct: 187 RVPETEASGRIHTSAATVAVLP-EAEDIDVEIRPEDIRIDTMRASGAGGQHVNTTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG++V E+SQH+N+A+A +LR++LY++E QK + K+++G G Sbjct: 246 ITHLPTGLIVTSS-EKSQHQNRAKAMQVLRSRLYDIERQKVDSER--SADRKSQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ V++G++D+ + A +A Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLYKLDRVIEGEIDELVDALIA 345 >gi|34580696|ref|ZP_00142176.1| peptide chain release factor RF-2 [Rickettsia sibirica 246] gi|28262081|gb|EAA25585.1| peptide chain release factor RF-2 [Rickettsia sibirica 246] Length = 285 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 166/279 (59%), Positives = 210/279 (75%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +A E+D L + +L+ + + + E L SGEAD N+ +LE++AGAGGTES DWA Sbjct: 1 MAEAENDLETLSQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEINAGAGGTESHDWA 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 ++++RMY R+AE+ FKTE + + +GEEAGIKS T+ I G AYGW K E GVHRLVRIS Sbjct: 61 SIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTETGVHRLVRIS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+++ +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQHVNTTDSAVRITH Sbjct: 121 PFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 IPTG V QCQ +RSQHKNKAQA ML+AKLYELE+QKR + N ++KT+ WG QIRS Sbjct: 181 IPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWGHQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 YVLQPY MVKDLRT+ E + VLDGDL++F+ A LA+ Sbjct: 241 YVLQPYHMVKDLRTDYETSDTKGVLDGDLEEFVSANLAM 279 >gi|148244818|ref|YP_001219512.1| peptide chain release factor 1 [Candidatus Vesicomyosocius okutanii HA] gi|166223616|sp|A5CW65|RF1_VESOH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|146326645|dbj|BAF61788.1| peptide chain release factor RF-1 [Candidatus Vesicomyosocius okutanii HA] Length = 361 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 115/347 (33%), Positives = 178/347 (51%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + RL ++ DP + NV + L E L + L + +L Sbjct: 9 LEQLSIRLEEVSIMLSDPEVVSNVKKFTKLSIEYAQLTPVNQQFQTYLSHLKNLEDA-QL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 L EDD I + + K + + DS + +E+ AG GG E+ Sbjct: 68 ILFEDDMEIKTMAKEEILNTKKILSQLDLKLKKSILPKDPNDSRNIIIEIRAGTGGDEAS 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 ++ L ++Y+R++EK+K+ E + GE G K I G N Y LK E G HR+ Sbjct: 128 IFSGDLFKIYSRYSEKQKWTIEIISSSIGEHGGFKEIIARISGINVYSKLKFESGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS ++ + P V++ EI I+ +D RIDT+RASGAGGQHVN TDSAVR Sbjct: 188 RVPTTESQGRIHTSACTVAIMPEVENIEEINININDVRIDTFRASGAGGQHVNKTDSAVR 247 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR- 310 ITH+PTG VV+CQ RSQHKNKAQA ++L +++ + + +E+ + K IG G Sbjct: 248 ITHLPTGTVVECQDGRSQHKNKAQAMSVLASRILDAQQ--QEQQEQQSSTRKELIGSGDR 305 Query: 311 --QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ +++++G+L +K + ++ Sbjct: 306 SQRIRTYNY-PQGRITDHRINLTLYKLTEIMEGNLSAIIKPLIIEQQ 351 >gi|193078655|gb|ABO13705.2| peptide chain release factor 2 [Acinetobacter baumannii ATCC 17978] Length = 305 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 161/293 (54%), Positives = 210/293 (71%), Gaps = 1/293 (0%) Query: 47 RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106 +E+ L+N I+ + + +L D +L+LA+E DD S+L++ L + E+ +F Sbjct: 3 KEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELSTAEEELAKLEFRR 62 Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S D N Y+E+ AG+GGTE+QDWA+MLLRMY RW E+ FK E +E+ DG+ AGIK Sbjct: 63 MFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAGIK 122 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ ++G AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+ S Sbjct: 123 SATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDINPS 182 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D R DTYRASGAGGQH+N TDSAVR+THIPTG+VV CQ +RSQH N+ AW LRAKLYE Sbjct: 183 DVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQLRAKLYE 242 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 LE+QKR E A E SK++IGWG QIRSYVL +KDLRT +E L Sbjct: 243 LEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDD-SRIKDLRTGVEIQILVRFL 294 >gi|332521778|ref|ZP_08398229.1| peptide chain release factor 1 [Lacinutrix algicola 5H-3-7-4] gi|332042608|gb|EGI78809.1| peptide chain release factor 1 [Lacinutrix algicola 5H-3-7-4] Length = 358 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 101/346 (29%), Positives = 170/346 (49%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLIL 72 QR ++ P + + L RE + L + E + L + + Sbjct: 5 LQIVKQRFDEVSDLIIQPDIITDQKRYVELNREYKDLRLLMDKRELYLEFTNNLAEAEEI 64 Query: 73 LELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 + + + + + D + E + + D+ +A +E+ AG GG E+ Sbjct: 65 IADGSDPEMVEMAKMQYDEAKTAIPELEEEIKVLLIPKDPQDAKNAVVELRAGTGGDEAS 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYT++ E + ++ + ++ +G G K + G + YG LK E GVHR+ Sbjct: 125 IFAGDLYRMYTKYCESKGWRVDTVDYSEGTNGGFKEIQFEVSGDDVYGTLKFEAGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V+P ++ I D RID + +SG GGQ VNTT SAVR Sbjct: 185 RVPQTETQGRVHTSAATVMVFPEAEEFDVE-IDPKDVRIDYFCSSGPGGQSVNTTYSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +TH PTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL K+ E T + G + Sbjct: 244 LTHEPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDLELAKKMEEDAALRG--TMVTSGDR 301 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P V D R + S++++GD+ + + + Sbjct: 302 SAKIRTYNY-PQGRVTDHRIGLTLYDLSNIVNGDIQKIIDELMLAE 346 >gi|254472406|ref|ZP_05085806.1| peptide chain release factor 1 [Pseudovibrio sp. JE062] gi|211958689|gb|EEA93889.1| peptide chain release factor 1 [Pseudovibrio sp. JE062] Length = 357 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 115/352 (32%), Positives = 180/352 (51%), Gaps = 22/352 (6%) Query: 16 WDNAVQRLSFLNTKTED---PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 D + R + + P + L R+ L+ + I+E++ D Sbjct: 7 LDTLLARFEGIEAEMASGPAPDV------YIKLSRDYAELEPIVMSIRELRKAEGDLEGA 60 Query: 73 LELALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L + D + ++E + + + + + L +ADS+D LEV AG GG Sbjct: 61 EALLSDPDSDAEMKELAQLERDELTGVVEELTQKVRIGLLPKDKADSHDVILEVRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY R+A+ +K E + +G+ G K + G +G LK E GV Sbjct: 121 DEAALFAGDLFRMYQRFADNNGWKVEVMSSSEGDMGGFKEIVAAVTGQEVFGKLKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + ++++I+ +D RIDTYRASGAGGQHVNTTD Sbjct: 181 HRVQRVPETESGGRIHTSAATVAVLP-QAEEVDVDINPADLRIDTYRASGAGGQHVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH PTG+VV Q ERSQHKNK +A +LRAK+Y++E ++ E+ + ++G Sbjct: 240 SAVRITHNPTGIVVAVQDERSQHKNKDRAMKLLRAKIYDVERER--AANERTEARRVQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 G +IR+Y P V D R + ++ G+ + + A + Sbjct: 298 SGDRSERIRTYNF-PQGRVTDHRIGLTLYKLDQMMTGEATGEVIDALTMDHQ 348 >gi|212690981|ref|ZP_03299109.1| hypothetical protein BACDOR_00471 [Bacteroides dorei DSM 17855] gi|237712531|ref|ZP_04543012.1| peptide chain release factor 1 [Bacteroides sp. 9_1_42FAA] gi|237726705|ref|ZP_04557186.1| peptide chain release factor 1 [Bacteroides sp. D4] gi|265752224|ref|ZP_06088017.1| peptide chain release factor 1 [Bacteroides sp. 3_1_33FAA] gi|212666213|gb|EEB26785.1| hypothetical protein BACDOR_00471 [Bacteroides dorei DSM 17855] gi|229435231|gb|EEO45308.1| peptide chain release factor 1 [Bacteroides dorei 5_1_36/D4] gi|229453852|gb|EEO59573.1| peptide chain release factor 1 [Bacteroides sp. 9_1_42FAA] gi|263237016|gb|EEZ22486.1| peptide chain release factor 1 [Bacteroides sp. 3_1_33FAA] Length = 371 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 95/354 (26%), Positives = 163/354 (46%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V R ++T DP++ + L +E + L++ + +E L ++ Sbjct: 12 LDGLVARFEEVSTLITDPNVIADQKRYVKLTKEYKDLNDIMKARREYIQCLNGLEEAKQI 71 Query: 76 ALEEDDCSILQETSDNLQRIK----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + + E + + + D +A LE+ G GG E+ Sbjct: 72 MTNESDPEMKEMAREEANLCEVRIPELEEEIKLLLVPADPQDDRNAILEIRGGTGGDEAA 131 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+++ E + +K E ++G G K + G YG LK E GVHR+ Sbjct: 132 IFAGDLFRMYSKYCETKGWKLEVSSANEGAAGGFKEIICSVTGDKVYGTLKYESGVHRVQ 191 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +S+ V P + I+E + + DT+R+ GAGGQ+VN +S VR Sbjct: 192 RVPATETQGRVHTSAASVAVLPEAEPFDVE-INEGEIKWDTFRSGGAGGQNVNKVESGVR 250 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + + ++++C + R Q KNK +A + LR +Y+ E QK I +I K Sbjct: 251 LRYNWKNPNTGIVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRK 308 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 T + G + IR+Y P + D R N + + +DGD+ D + + Sbjct: 309 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLTVAE 361 >gi|254304309|ref|ZP_04971667.1| peptide chain release factor RF2 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148324501|gb|EDK89751.1| peptide chain release factor RF2 [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 308 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 148/303 (48%), Positives = 209/303 (68%), Gaps = 1/303 (0%) Query: 53 DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112 N +S +++ + D +L++ + + + + +K ++E + LL GE Sbjct: 5 KNIVSRYEKLATEIDDEEVLIDFVESGETSFENELSE-KHKILKSDIEEFEINLLLDGEY 63 Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D N+A + +H+GAGGTE+ DWA+ML RMY RW + +K L+ +G+ G+KS T L+ Sbjct: 64 DMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKAYKVSELDFMEGDSVGVKSVTFLV 123 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G NAYG+LK E+GVHRLVRISP+D+N +RHTSF+S+ V P VD+++E+EI+ +D RIDT Sbjct: 124 EGINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDENVEVEINPADIRIDT 183 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 YRASGAGGQHVN TDSAVRITH P+G+VV CQ+ERSQ N+ A ML++KL ELEL+K+ Sbjct: 184 YRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQLSNRETAMKMLKSKLLELELKKK 243 Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 EE + +++IGWG QIRSYV QPY +VKD RTN E + V+DG +DDF+ + L Sbjct: 244 EEEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDHRTNTEIGNVKAVMDGSIDDFINSYLR 303 Query: 353 IKK 355 K Sbjct: 304 WIK 306 >gi|150002702|ref|YP_001297446.1| peptide chain release factor 1 [Bacteroides vulgatus ATCC 8482] gi|254882204|ref|ZP_05254914.1| peptide chain release factor 1 [Bacteroides sp. 4_3_47FAA] gi|294776956|ref|ZP_06742417.1| peptide chain release factor 1 [Bacteroides vulgatus PC510] gi|319643236|ref|ZP_07997864.1| peptide chain release factor 1 [Bacteroides sp. 3_1_40A] gi|149931126|gb|ABR37824.1| peptide chain release factor 1 [Bacteroides vulgatus ATCC 8482] gi|254834997|gb|EET15306.1| peptide chain release factor 1 [Bacteroides sp. 4_3_47FAA] gi|294449204|gb|EFG17743.1| peptide chain release factor 1 [Bacteroides vulgatus PC510] gi|317385140|gb|EFV66091.1| peptide chain release factor 1 [Bacteroides sp. 3_1_40A] Length = 371 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 94/354 (26%), Positives = 163/354 (46%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V R ++T DP++ + L +E + L++ + +E L ++ Sbjct: 12 LDGLVARFEEVSTLITDPNVIADQKRYVKLTKEYKDLNDIMKARREYIQCLNGLEEAKQI 71 Query: 76 ALEEDDCSILQETSDNLQRIK----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + + E + + + D +A LE+ G GG E+ Sbjct: 72 MTNESDPEMKEMAREEANLCEVRIPELEEEIKLLLVPADPQDDRNAILEIRGGTGGDEAA 131 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+++ E + ++ E ++G G K + G YG LK E GVHR+ Sbjct: 132 IFAGDLFRMYSKYCETKGWRLEVSSANEGAAGGFKEIICSVTGDKVYGTLKYESGVHRVQ 191 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +S+ V P + I+E + + DT+R+ GAGGQ+VN +S VR Sbjct: 192 RVPATETQGRVHTSAASVAVLPEAEPFDVE-INEGEIKWDTFRSGGAGGQNVNKVESGVR 250 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + + ++++C + R Q KNK +A + LR +Y+ E QK I +I K Sbjct: 251 LRYNWKNPNTGIVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRK 308 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 T + G + IR+Y P + D R N + + +DGD+ D + + Sbjct: 309 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLTVAE 361 >gi|298373047|ref|ZP_06983037.1| peptide chain release factor 1 [Bacteroidetes oral taxon 274 str. F0058] gi|298275951|gb|EFI17502.1| peptide chain release factor 1 [Bacteroidetes oral taxon 274 str. F0058] Length = 360 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 111/346 (32%), Positives = 164/346 (47%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + ++T DP + + L +E L+ I E L + +L Sbjct: 9 LDGLSSKFDEISTLITDPAIIADTKRFVKLNKEYADLEKIIKKRDEYSLLLKNLQEATDL 68 Query: 76 ALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + RI+ E + + + D +A +E+ G GG E+ Sbjct: 69 LATEKDEELREMARQEIDAVTPRIEPLEEEIKLLLVPADPQDGKNAIVEIRGGTGGDEAA 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L +MY R+ E R +KTE +G G K + G N YG LK E GVHR+ Sbjct: 129 IFAGDLFKMYARYCESRGWKTEVTSFTEGTMGGYKEIIFSVSGDNVYGTLKYESGVHRVQ 188 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P ++ I ESD R D + ASG GGQ VNTT SA+R Sbjct: 189 RVPATESQGRVHTSAATVAVLPEAEEFDIE-IKESDIRTDIFCASGHGGQSVNTTYSAIR 247 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 + HIPTG+ VQCQ E+SQ KNKA+A LR ++Y +E QK I +I KT + G + Sbjct: 248 LVHIPTGITVQCQDEKSQLKNKAKAMTELRTRIYNIEYQKY--IDDIASKRKTMVSSGDR 305 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P + D R N + + GD+ + + + Sbjct: 306 SAKIRTYNY-PQGRITDHRINYTAYNLPAFVGGDIQECIDQLTIAE 350 >gi|118464752|ref|YP_880755.1| peptide chain release factor 1 [Mycobacterium avium 104] gi|166223570|sp|A0QCW7|RF1_MYCA1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|118166039|gb|ABK66936.1| peptide chain release factor 1 [Mycobacterium avium 104] Length = 357 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 112/332 (33%), Positives = 165/332 (49%), Gaps = 9/332 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + + L + DP L N EA+ R L + +++ D EL Sbjct: 8 IDVLLAEHADLERRLSDPDLHSNPDEARKAGRRFARLAPIVGTYRKLMAAREDLETAREL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A ++D + ++ D++D LEV +G GG ES +A Sbjct: 68 AADDDSFTAEVADLESRVAQLDTQLTDML--APRDSHDADDIVLEVKSGEGGEESALFAA 125 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190 L RMY R+AE+ + L+ + G K ATL I+ + +K E GVHR+ Sbjct: 126 DLARMYIRYAERHGWTVTVLDEITSDLGGYKDATLSIRSKGDSADGVWSRMKFEGGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS + + VYP ++ E++I ESD RID +R+SG GGQ VNTTDSAV Sbjct: 186 QRVPVTESQGRVHTSAAGVLVYPEPEEVAEVQIDESDLRIDVFRSSGKGGQGVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTGVVV CQ ERSQ +NKA+A +L A+L + ++ A+ +S+ + Sbjct: 246 RITHLPTGVVVTCQNERSQLQNKARALQVLAARLQAMAEEQASAEASADRASQIRTVDRS 305 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 +IR+Y P + D R + + VLDG Sbjct: 306 ERIRTYNF-PENRITDHRIGFKAHNLDQVLDG 336 >gi|157828246|ref|YP_001494488.1| peptide chain release factor 2 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165932947|ref|YP_001649736.1| peptide chain release factor 2 [Rickettsia rickettsii str. Iowa] gi|157800727|gb|ABV75980.1| peptide chain release factor 2 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908034|gb|ABY72330.1| bacterial peptide chain release factor 2 (RF-2) [Rickettsia rickettsii str. Iowa] Length = 285 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 166/279 (59%), Positives = 211/279 (75%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +A E+D L + +L+ + + + E L SGEAD N+ +LE++AGAGGTES DWA Sbjct: 1 MAEAENDLETLSQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEINAGAGGTESHDWA 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 ++++RMY R+AE+ FKTE + + +GEEAGIKS T+ I G AYGW K E GVHRLVRIS Sbjct: 61 SIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTEAGVHRLVRIS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+++ +R TSF+S W+YP +DD+I I I + D RIDT+RASGAGGQHVNTTDSAVRITH Sbjct: 121 PFNAAGKRMTSFASSWIYPEIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 IPTG V QCQ +RSQHKNKAQA ML+AKLYELE+QKR + N ++KT+ WG QIRS Sbjct: 181 IPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWGHQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 YVLQPYQMVKDLRT+ E + VLDGDL++F+ A LA+ Sbjct: 241 YVLQPYQMVKDLRTDYETSDTKGVLDGDLEEFVSANLAM 279 >gi|68249758|ref|YP_248870.1| peptide chain release factor 2 [Haemophilus influenzae 86-028NP] gi|68057957|gb|AAX88210.1| peptide chain release factor 2 [Haemophilus influenzae 86-028NP] gi|301169953|emb|CBW29557.1| peptide chain release factor 2 [Haemophilus influenzae 10810] Length = 283 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 161/282 (57%), Positives = 210/282 (74%), Gaps = 1/282 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 +LELA+E +D E L ++ ++E +F + SGE D+ D Y+++ AG+GGTE+Q Sbjct: 1 MLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQ 60 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G A+GWL+ E G+HRLV Sbjct: 61 DWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETGIHRLV 120 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 121 RKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 180 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+P+G+VVQCQ +RSQHKNK QA L+AKLYELELQK+ E +K++IGWG Q Sbjct: 181 ITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGWGSQ 240 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 IRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 241 IRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 281 >gi|254229664|ref|ZP_04923074.1| Protein chain release factor B [Vibrio sp. Ex25] gi|151937785|gb|EDN56633.1| Protein chain release factor B [Vibrio sp. Ex25] Length = 248 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 153/246 (62%), Positives = 191/246 (77%), Gaps = 1/246 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ DS+D Y+++ AG+GGTE+QDW NMLLRMY RWAE + FK E +E+ +GE AG+K Sbjct: 1 MFSGDHDSSDCYIDLQAGSGGTEAQDWTNMLLRMYLRWAEAKGFKAEVIEVSEGEVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSF+S ++YP +D++I+I+I+ S Sbjct: 61 SATVRISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEIDENIDIDINPS 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK QA LRAKL+E Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LELQK+ E +K++IGWG QIRSYVL +KDLRT IE + VLDGDLD F Sbjct: 181 LELQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDKF 239 Query: 347 MKATLA 352 ++A+L Sbjct: 240 IEASLK 245 >gi|144897745|emb|CAM74609.1| peptide chain release factor RF-1 [Magnetospirillum gryphiswaldense MSR-1] Length = 352 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 114/345 (33%), Positives = 179/345 (51%), Gaps = 13/345 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + R L + + L +E ++ + ++ ++ D + Sbjct: 7 LDKVLYRYDELREQLAAG----DGGSFARLSKEFSDIEPVVHAVQALKKARADMAEAEAM 62 Query: 76 ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + E L+ Q L EAD +A LEV AG GG E+ +A Sbjct: 63 MADPDMKDLAAEEYYALKETLPGLERDVQLMLLPKDEADEKNAILEVRAGTGGEEAALFA 122 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+A R ++ E +++++ G+K A+ I G + LK E GVHR+ R+ Sbjct: 123 AELFRMYERYASVRGWRFEVMDVNETGIGGMKEASATITGRGVFARLKFESGVHRVQRVP 182 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ + P + ++I+I + D R D YR+ G+GGQ VNTTDSAVR+TH Sbjct: 183 ATESGGRIHTSAATVAIMP-EAEEVDIQIDDKDLRFDVYRSQGSGGQSVNTTDSAVRVTH 241 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+ V CQQE+SQHKNKA A +LRA+LY E+++ + A + K+++G G + Sbjct: 242 IPTGLAVACQQEKSQHKNKATAMKLLRARLY--EMERASKAAERAANRKSQVGSGDRSER 299 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIKK 355 IR+Y P V D R N+ D+++G LD+ A +A + Sbjct: 300 IRTYNF-PQGRVTDHRINLTLYKIDDMMNGTALDEVADALIAADQ 343 >gi|90420193|ref|ZP_01228101.1| peptide chain release factor 1 [Aurantimonas manganoxydans SI85-9A1] gi|90335527|gb|EAS49277.1| peptide chain release factor 1 [Aurantimonas manganoxydans SI85-9A1] Length = 359 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 114/349 (32%), Positives = 180/349 (51%), Gaps = 18/349 (5%) Query: 16 WDNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 D + R + L + P L E L+ ++ I+ Q + Sbjct: 9 LDEILNRFALLEHEMSKGPE----HEVYTKLAAEYSGLEEVVAAIRTYQKAEQELAEARA 64 Query: 75 LALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 + E ++E ++ E + L AD A LE+ AG GG+E Sbjct: 65 ILDEPAAGRDMRELAEIEIDELKEQLETLTAEIRILLLPKDAADEKGAILEIRAGTGGSE 124 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A L RMY R+AE ++K E + +GE G + I+G + LK E GVHR Sbjct: 125 AGLFAGDLFRMYQRYAEMNRWKVEIISASEGEVGGYREVIAAIRGVGVFSRLKFESGVHR 184 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS +++ V P + I++E+ D RIDT RASGAGGQHVNTTDSA Sbjct: 185 VQRVPETESGGRIHTSAATVAVLP-EAEDIDVEVKTEDIRIDTMRASGAGGQHVNTTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG+VV E+SQH+N+A+A +L+A+L+++E Q+ ++ + K+++G G Sbjct: 244 VRITHLPTGIVVTSS-EKSQHQNRARAMQVLKARLFDMERQRADDERSAA--RKSQVGSG 300 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V++G++D+ + A +A + Sbjct: 301 DRSERIRTYNF-PQGRVTDHRINLTLYKLDRVIEGEMDELVDALIADHQ 348 >gi|331695519|ref|YP_004331758.1| peptide chain release factor 1 [Pseudonocardia dioxanivorans CB1190] gi|326950208|gb|AEA23905.1| Peptide chain release factor 1 [Pseudonocardia dioxanivorans CB1190] Length = 366 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 116/346 (33%), Positives = 173/346 (50%), Gaps = 10/346 (2%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D + + L DP + + A+ L R + ++ KE+ D ELA Sbjct: 13 DALLAEHADLELMLADPAVHADPARARRLGRRYAEIGPVVAVAKELASVRDDLAAARELA 72 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 ++ + + + D++D LEV +G GG ES +A Sbjct: 73 ADDPTFGAEADDLAARVPALEARLAELL--VPRDPHDADDVVLEVKSGEGGEESALFAGD 130 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRLV 191 L+RMYTR+AE R + TE L+ + G K TL ++ + LK E GVHR+ Sbjct: 131 LVRMYTRFAESRGWSTEILDATTSDLGGYKDVTLSVRARVPAADGVWSALKFEGGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS + + VYP IEI ++D R+D +R+SG GGQ VNTTDSAV Sbjct: 191 RVPVTESQGRIHTSAAGVLVYPDTGADDAGIEIDDNDLRVDVFRSSGHGGQSVNTTDSAV 250 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG+VV CQ ERSQ +N+A+A +LR++L L ++ A+ S+ + Sbjct: 251 RITHLPTGIVVSCQNERSQLQNRARAMEVLRSRLQALAEEEAAARASDARRSQVRTVDRS 310 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + + S VLDGDL D + A +A + Sbjct: 311 ERIRTYNF-PENRIADHRVGYKAHNLSAVLDGDLGDVIAALVAADR 355 >gi|116513791|ref|YP_812697.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|313123397|ref|YP_004033656.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|122275439|sp|Q04BB3|RF1_LACDB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|116093106|gb|ABJ58259.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|312279960|gb|ADQ60679.1| Peptide chain release factor 1 [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|325125449|gb|ADY84779.1| Peptide chain release factor 1 [Lactobacillus delbrueckii subsp. bulgaricus 2038] gi|325684404|gb|EGD26572.1| peptide chain release factor RF1 [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 361 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 92/342 (26%), Positives = 165/342 (48%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ R + DP + + + +E + + ++ + + E+ Sbjct: 8 LESLEVRYEEIQEMMADPEVIADTKRYMEITKEEADMREVVQKFRKFKADKEEIAGNKEI 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 + D +++ ++ E+ + L D D +E+ AGG E+ Sbjct: 68 IADGSDPELVEMAKMENSELEDEISQLEDEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY ++AE + + ++ E G K ++I G Y LK E G HR+ Sbjct: 128 LFAGDLLRMYEKYAENQGWNVSIVDSEQTEVGGYKRVAIMITGNKVYSKLKYENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ V P + ++I++ + R+D YR+SGAGGQH+N T SAVR Sbjct: 188 RIPVTESAGRVHTSTATVAVMP-EYEQVDIDLDPKEIRVDVYRSSGAGGQHINKTSSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q +RSQ +N+A+A +L++++Y+ + + K +G G Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQNRD--KYDAKRKNAVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R + +++G+LD+ + A Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEVIDAL 345 >gi|329124057|ref|ZP_08252604.1| peptide chain release factor RF2 [Haemophilus aegyptius ATCC 11116] gi|327467482|gb|EGF12980.1| peptide chain release factor RF2 [Haemophilus aegyptius ATCC 11116] Length = 283 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 160/282 (56%), Positives = 211/282 (74%), Gaps = 1/282 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 +LELA+E +D E L ++ ++E +F + SGE D+ + Y+++ AG+GGTE+Q Sbjct: 1 MLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACNCYVDLQAGSGGTEAQ 60 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G A+GWL+ E G+HRLV Sbjct: 61 DWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETGIHRLV 120 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVR Sbjct: 121 RKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 180 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH+P+G+VVQCQ +RSQHKNK QA L+AKLYELELQK+ + E +K++IGWG Q Sbjct: 181 ITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQVMEDNKSDIGWGSQ 240 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 IRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 241 IRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 281 >gi|308177036|ref|YP_003916442.1| peptide chain release factor 1 [Arthrobacter arilaitensis Re117] gi|307744499|emb|CBT75471.1| peptide chain release factor 1 [Arthrobacter arilaitensis Re117] Length = 357 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 108/350 (30%), Positives = 179/350 (51%), Gaps = 11/350 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + ++ + + + DP ++ + A+ L R L+ + + Q D Sbjct: 1 MFESVKSLLEEHAAIQAQLSDPAVYADQALARKLGRRSAQLNGIVEAYNKWQTATDDLEA 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E+A E+ D + + E + + E D + LEV G GG E+ Sbjct: 61 AQEMADEDPDFAEEVQALTEELPQLEEKLRRLL--IPRDENDGRNVILEVKGGEGGDEAA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI------KGPNAYGWLKGEQ 185 +A LLRMYTR+AE + +K E + ++ + G K A + I Y LK E Sbjct: 119 LFAADLLRMYTRFAEHKGWKVEMISFNESDLGGYKDAQVAIKGNSNDPAEGVYAQLKFEG 178 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ +S R HTS + + V P VD+ E++I ++D +ID YR+SG GGQ VNT Sbjct: 179 GVHRVQRVPVTESQGRIHTSAAGVLVLPEVDEPEEVDIHQNDLKIDVYRSSGPGGQSVNT 238 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITH+PTG+VV Q E+SQ +N+ A +LR++L + + ++ + +S+ Sbjct: 239 TDSAVRITHLPTGIVVAMQNEKSQIQNREAAMRVLRSRLLAHQQEIIDKENSAQRASQIR 298 Query: 306 -IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +IR+Y P + D RT + + V+DGDL +++ + + Sbjct: 299 TMDRSERIRTYNY-PENRIADHRTGYKAYNLDAVMDGDLQPVVESCIQMD 347 >gi|298209284|ref|YP_003717463.1| peptide chain release factor 1 [Croceibacter atlanticus HTCC2559] gi|83849211|gb|EAP87080.1| peptide chain release factor 1 [Croceibacter atlanticus HTCC2559] Length = 358 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 97/342 (28%), Positives = 167/342 (48%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72 + QR ++ P + + L +E + L + + +R+ + + Sbjct: 5 LNIVKQRFDEISDLIIQPDIISDQKRYVELTKEYKDLKKLMDERENYIRVTNRIEEAEEI 64 Query: 73 LELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 + + + + + D + + + + DS +A +EV AG GG E+ Sbjct: 65 IADGSDPEMSEMAKMQLDEAKSELPALDDKIRMMLIPKDPEDSKNAVVEVRAGTGGDEAS 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A + RM T++ E + + ++ +G G K + G + YG LK E GVHR+ Sbjct: 125 IFAGDIYRMLTKFCESKGWNCSTVDFSEGTSGGFKEIQFEVSGDDVYGTLKYEAGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V+P ++ I D RID + +SG GGQ VNTT SAVR Sbjct: 185 RVPQTETQGRVHTSAATVMVFPEAEEFDVE-IDPKDVRIDYFCSSGPGGQSVNTTYSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +TH PTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL K++E + + G + Sbjct: 244 LTHEPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDLELAKKQEEDAAKRG--SMVTSGDR 301 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y V D R N+ +++DGD+ + Sbjct: 302 SAKIRTYNYA-QGRVTDHRINLTIYDLQNIIDGDIQRIIDEL 342 >gi|163735803|ref|ZP_02143232.1| peptide chain release factor 1 [Roseobacter litoralis Och 149] gi|161390889|gb|EDQ15229.1| peptide chain release factor 1 [Roseobacter litoralis Och 149] Length = 351 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 116/344 (33%), Positives = 174/344 (50%), Gaps = 12/344 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +R +L ++ L +E L + I Q L D E+ Sbjct: 7 LRQITERFQYLEAAMSTGDGGGDIA---TLAKEYSDLRPVVEQISAYQQLLNDLEDAAEM 63 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + +E L+ Q L +AD+ A LE+ G GG E+ +A Sbjct: 64 LGDPDMAPLAEEEIPRLKSALPQAEAALQLALLPKDKADAKPAMLEIRPGTGGDEAALFA 123 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+AE + +K + +E+ + E GIK IKG + + LK E GVHR+ R+ Sbjct: 124 GDLFRMYQRYAETQGWKVDVIELQETELGGIKEVVAHIKGADVFARLKYESGVHRVQRVP 183 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P + ++I I +D RIDT R+SGAGGQHVNTTDSAVRITH Sbjct: 184 STESGGRIHTSAATVAVLP-EAEDVDIHIEANDLRIDTMRSSGAGGQHVNTTDSAVRITH 242 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV E+SQH+N+ A +L+A+LY+LE + ++ ++G G + Sbjct: 243 LPTGLVVTSS-EKSQHRNREIAMQVLKARLYDLERSRVDDER--SADRAAQVGSGDRSER 299 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ +L GDLD+ + A A + Sbjct: 300 IRTYNF-PQGRMTDHRINLTLYRLDAILQGDLDEIIDALTAHAQ 342 >gi|306825267|ref|ZP_07458609.1| peptide chain release factor RF1 [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432703|gb|EFM35677.1| peptide chain release factor RF1 [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 359 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 98/348 (28%), Positives = 161/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + L + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E G K ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGHSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350 >gi|325856854|ref|ZP_08172352.1| peptide chain release factor 1 [Prevotella denticola CRIS 18C-A] gi|327314543|ref|YP_004329980.1| peptide chain release factor 1 [Prevotella denticola F0289] gi|325483227|gb|EGC86204.1| peptide chain release factor 1 [Prevotella denticola CRIS 18C-A] gi|326945459|gb|AEA21344.1| peptide chain release factor 1 [Prevotella denticola F0289] Length = 370 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 92/354 (25%), Positives = 157/354 (44%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R ++T DP + + L +E + L + + + + L ++ Sbjct: 11 LDGLEARYEEVSTLITDPSVIADQKRYVKLTKEYKDLGDIMDARRRYVNCLTTIKEAKDI 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + L + + + D + +E+ GAGG E+ Sbjct: 71 IANESDAEMKEMAREELSENEELQPKIEEEIKLLLVPKDPEDGKNVQMEIRGGAGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MY R+ +K+ +K + +G G K ++G N YG LK E GVHR+ Sbjct: 131 LFAGDLFNMYKRYCDKKGWKLSVTSVSEGAVGGFKEIDFAVEGENVYGTLKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P D I+E D + DT+R+SGAGGQ+VN +S VR Sbjct: 191 RVPATETQGRMHTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKVESGVR 249 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + + ++++C + R Q KNK +A + L +Y+ E QK I +I K Sbjct: 250 LRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTYIYDHEHQKY--IDDIASRRK 307 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 T + G + IR+Y P V D R ++GD+ + + A + Sbjct: 308 TLVSTGDRSAKIRTYNF-PQGRVTDHRIGFTTHDLQGFMNGDIQEMIDALTVAE 360 >gi|83951817|ref|ZP_00960549.1| peptide chain release factor 1 [Roseovarius nubinhibens ISM] gi|83836823|gb|EAP76120.1| peptide chain release factor 1 [Roseovarius nubinhibens ISM] Length = 349 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 120/339 (35%), Positives = 176/339 (51%), Gaps = 14/339 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +QR F+ + ++ + L RE L + I+ + L + Sbjct: 7 LDQILQRFEFIEAQMSAGS--GDIAQ---LGREYAELRPVVEEIRAYRAALDAAEQAEAM 61 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + ++ L+ E Q L EAD+ A +E+ G GG E+ +A Sbjct: 62 LGDPEMRELAEDELRTLKAELPGREKALQLALLPKDEADARPAIIEIRPGTGGEEAALFA 121 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE R ++ E +E E GIK A + +KG + + LK E GVHR+ R+ Sbjct: 122 GDLLRMYARYAEARGWQFEVIEEAQTELGGIKEAVVHVKGAHVFARLKYESGVHRVQRVP 181 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P + ++I I SD RIDT RASGAGGQHVNTTDSAVRITH Sbjct: 182 ETESGGRIHTSAATVAVLP-EAEDVDIHIDPSDIRIDTMRASGAGGQHVNTTDSAVRITH 240 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IP+G+VV E+SQH+N+ A +L+ +LY+LE QK + ++G G + Sbjct: 241 IPSGIVVTSS-EKSQHRNREIAMQVLKTRLYDLERQKVHDAR--SADRAAQVGSGDRSER 297 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P + D R N+ V+ GDLDD + A Sbjct: 298 IRTYNF-PQGRMTDHRINLTLYKLDQVMAGDLDDIIDAL 335 >gi|104773785|ref|YP_618765.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|119361552|sp|Q1GAX5|RF1_LACDA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|103422866|emb|CAI97528.1| Peptide chain release factor 1 (RF-1) [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 361 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 93/342 (27%), Positives = 166/342 (48%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ R + DP + + + +E + + ++ + + E+ Sbjct: 8 LESLEVRYEEIQEMMADPEVIADTKRYMEITKEEADMREVVQKFRKFKADKEEIAGNKEI 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 + D +++ ++ E+ + L D D +E+ AGG E+ Sbjct: 68 IADGSDPELVEMAKMENSELEDEISQLEDEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY ++AE + + ++ E G K A ++I G Y LK E G HR+ Sbjct: 128 LFAGDLLRMYEKYAENQGWNVSIVDSEQTEVGGYKRAAIMITGNKVYSKLKYENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ V P + ++I++ + R+D YR+SGAGGQH+N T SAVR Sbjct: 188 RIPVTESAGRVHTSTATVAVMP-EYEQVDIDLDPKEIRVDVYRSSGAGGQHINKTSSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q +RSQ +N+A+A +L++++Y+ + + K +G G Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQNRD--KYDAKRKNAVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R + +++G+LD+ + A Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEVIDAL 345 >gi|163743155|ref|ZP_02150537.1| peptide chain release factor 1 [Phaeobacter gallaeciensis 2.10] gi|161383572|gb|EDQ07959.1| peptide chain release factor 1 [Phaeobacter gallaeciensis 2.10] Length = 351 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 116/344 (33%), Positives = 173/344 (50%), Gaps = 12/344 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +QR +L + ++ L +E L I + L D ++ Sbjct: 7 LEQILQRFQYLEAAMAEGVAGADIA---ALAKEYSDLRPVAEQISAYRRLLSDLEEAEQM 63 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + +E L+ Q L EAD+ A LE+ G GG E+ +A Sbjct: 64 LADPDMAELAEEELPQLRAALPEAEHALQLALLPRDEADARPAMLEIRPGTGGDEAALFA 123 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE R + E +E E G+K +KG N + LK E GVHR+ R+ Sbjct: 124 GDLLRMYQRYAEARGWGIEIIEEQTTELGGLKEVVAHVKGENVFARLKYESGVHRVQRVP 183 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P + +++ I D RIDT RASGAGGQHVNTTDSAVRITH Sbjct: 184 VTESGGRIHTSAATVAVLP-EAEDVDLRIDPGDLRIDTMRASGAGGQHVNTTDSAVRITH 242 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG++V E+SQH+N+ A ++R +LY+LE Q+ + +++G G + Sbjct: 243 IPTGIIV-VSSEKSQHRNREIAMQVMRTRLYDLERQRIDSER--SADRASQVGSGDRSER 299 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++ GDLD+ + A A + Sbjct: 300 IRTYNF-PQGRMSDHRINLTLYKLDQIMQGDLDEIIDALTADDQ 342 >gi|329939826|ref|ZP_08289127.1| peptide chain release factor 1 [Streptomyces griseoaurantiacus M045] gi|329301396|gb|EGG45291.1| peptide chain release factor 1 [Streptomyces griseoaurantiacus M045] Length = 361 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 118/353 (33%), Positives = 177/353 (50%), Gaps = 19/353 (5%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + V + L K DP + + A+ L + L ++ + + D Sbjct: 1 MFEAVEELVGEHADLEKKLADPAVHADQANARRLNKRYAELTPIVATYRSWKRTGDDLGT 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E DD + E + Q+ + E + + +D D LE+ AGAGG ES Sbjct: 61 AREF--AADDPDFVAEVKELEQQREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-------------AY 178 +A LLRMY R+AE+ +KTE ++ + E G K + +K + Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVAVKTKPHGVSQGATEPGQGVW 178 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 LK E GVHR+ R+ +S R HTS + + V P + +++EI+ SD RID YR+SG Sbjct: 179 ARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEVDVEINPSDLRIDVYRSSGP 237 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTTDSAVRITH+PTGVV CQ E+SQ +NK QA +LR++L ++ E+ A Sbjct: 238 GGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRSRLLAAAQEEAEKEAAD 297 Query: 299 GESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 S+ + +IR+Y P + D R + + VLDGDLD ++A Sbjct: 298 ARRSQVRTVDRSEKIRTYNY-PENRISDHRVGFKAYNLDQVLDGDLDAVIQAC 349 >gi|306840415|ref|ZP_07473178.1| peptide chain release factor 2 [Brucella sp. BO2] gi|306289615|gb|EFM60824.1| peptide chain release factor 2 [Brucella sp. BO2] Length = 292 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 192/280 (68%), Positives = 238/280 (85%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + EE D SI+++ ++ +K E++ +Q + LLSGEAD+ND YLEVHAGAGGTESQDWA Sbjct: 1 MGEEEGDKSIVEDAEKTIRDLKDEIDRRQIDMLLSGEADANDTYLEVHAGAGGTESQDWA 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 +MLLRMYTRWAE+ K E +E+H+GEEAGIKSAT+L+KG N+YG LK E GVHRLVRIS Sbjct: 61 SMLLRMYTRWAERNGRKVEVMEVHEGEEAGIKSATILVKGHNSYGMLKTESGVHRLVRIS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 PYDSN+RRHTSF+SIWVYPV+DD+IE++++E+D RIDTYRASGAGGQHVNTTDSAVRITH Sbjct: 121 PYDSNARRHTSFASIWVYPVIDDNIEVQVTEADVRIDTYRASGAGGQHVNTTDSAVRITH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 I TG+VVQCQ ERSQHKN+ +AW+MLRA+LYE EL+KREE + ++KT+IGWG QIRS Sbjct: 181 IATGIVVQCQAERSQHKNREKAWSMLRARLYEEELKKREEATDAANATKTDIGWGHQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 YVLQPYQ+VKDLRT +E T+P +VLDG + FM+A LA + Sbjct: 241 YVLQPYQLVKDLRTGVESTNPQEVLDGAVTPFMEAALAHR 280 >gi|301165960|emb|CBW25534.1| peptide chain release factor 1 [Bacteriovorax marinus SJ] Length = 357 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 113/352 (32%), Positives = 176/352 (50%), Gaps = 13/352 (3%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +FD D ++R L K DP ++ E K + ER +L+ + KE + D Sbjct: 2 SMFDKLDAVIERFETLTEKLADPTIYDRQDEFKKISSERSNLEEVVVAYKEYRQMKEDID 61 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAG 126 E+ E D + + + + + ++ + L D + +E+ AGAG Sbjct: 62 EAKEILKNEKDEDMKEMAKEVIAENEPQIPEMEERLTILLLPKDPLDDKNVMMEIRAGAG 121 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ + + RMY+ + FK E + I +G+E GIK + G Y LK E G Sbjct: 122 GDEASIFVGDVYRMYSNYFRDLGFKVEQVSISEGDE-GIKEIIFSVSGEKVYSKLKYESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S R HTS ++ V P D +E ++ +D RID YR+ GAGGQ VNTT Sbjct: 181 VHRVQRVPKTESQGRVHTSTITVAVMP-ETDDVEFDLDMNDVRIDVYRSGGAGGQSVNTT 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVR+THIPTG VV Q ++SQ KNK +A +L+ ++Y+ LQ++ A K + Sbjct: 240 DSAVRVTHIPTGTVVANQDQKSQLKNKEKALRILKNRIYDKMLQEKN--AAEAAERKGLV 297 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P + D R + S +++GD+ A +A + Sbjct: 298 GTGDRSERIRTYNF-PQGRLTDHRIGLTLYSLDKIIEGDMTPVTDALIAHNQ 348 >gi|329957131|ref|ZP_08297698.1| peptide chain release factor 1 [Bacteroides clarus YIT 12056] gi|328523399|gb|EGF50498.1| peptide chain release factor 1 [Bacteroides clarus YIT 12056] Length = 370 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 100/354 (28%), Positives = 169/354 (47%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V R ++T DP + + L +E + L + ++ KE L E+ Sbjct: 11 LEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMNARKEYMQVLSGIEEAKEI 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + L + + E + + DS +A LE+ GAGG E+ Sbjct: 71 IANETDAEMREMAREELDACQARQPELEEEIKLLLVPADPQDSRNAILEIRGGAGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYT++ E + +K + ++G G K + G N YG LK E GVHR+ Sbjct: 131 IFAGDLFRMYTKYCETKGWKLDISSANEGAAGGFKEIICSVTGDNVYGTLKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +S+ V P ++ + I+E + + DT+R+ GAGGQ+VN +S VR Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKVESGVR 249 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + + ++++C + R Q KNK +A + LR +Y+ E QK I +I K Sbjct: 250 LRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRK 307 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 T + G + IR+Y P + D R N + + +DGD+ D + + + Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360 >gi|327404087|ref|YP_004344925.1| peptide chain release factor 1 (bRF-1) [Fluviicola taffensis DSM 16823] gi|327319595|gb|AEA44087.1| bacterial peptide chain release factor 1 (bRF-1) [Fluviicola taffensis DSM 16823] Length = 359 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 105/346 (30%), Positives = 173/346 (50%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R + DP + ++ L +E + L+ + K ++ L + E+ Sbjct: 8 LEAIHFRFIEVGKMITDPEIISDMERYVKLNKEYRDLEEVDAAYKSYKNVLDNLKSSKEM 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + ++ + + E D +A +E+ AG GG E+ Sbjct: 68 LEVETDPEMREMAKMEINELEQQRPIIEEEIKVLLIPKDPEDDKNAIIELRAGTGGDEAC 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + + RMYT + ++ + E + +G G K ++ I G YG LK E GVHR+ Sbjct: 128 IFVEDIYRMYTMYFKEMGWAYEIVNSSEGSAKGYKEVSMSISGAGIYGMLKFESGVHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS ++ V P + ++ E+ +D R DT+RASGAGGQH+N T+SA+R Sbjct: 188 RVPETESQGRVHTSAITVAVLP-EAEEVDFELDMNDVRKDTFRASGAGGQHINKTESAIR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +THIPTG VV+CQ RSQHKN AQA ++LR++LY+ EL + + KT + G + Sbjct: 247 LTHIPTGTVVECQDGRSQHKNLAQAISVLRSRLYQAELDRVHQERAAH--RKTLVSTGDR 304 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P + D R N + S ++GD+ + + A + Sbjct: 305 SAKIRTYNY-PQGRITDHRINKTIYNLSAFMNGDVQEMIDALKMAE 349 >gi|223039191|ref|ZP_03609481.1| peptide chain release factor 1 [Campylobacter rectus RM3267] gi|222879552|gb|EEF14643.1| peptide chain release factor 1 [Campylobacter rectus RM3267] Length = 355 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 117/340 (34%), Positives = 176/340 (51%), Gaps = 9/340 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 R L+ DP + ++ L +E+ +L++ S K L D L + + Sbjct: 11 DRYDELSRLLSDPSITSDIANMTKLSKEQSNLEDIASAAKSYLQTLADIEENKALLDDAE 70 Query: 81 DCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139 + ++ NL+ K E + L D + +LE+ AG GG E+ +A L Sbjct: 71 LGELAKDELKNLESQKENLEEEIKILLLPKDPNDDKNVFLEIRAGTGGDEAALFAGDLFN 130 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 Y R+AE R +K E + +G G K LLIKG AY LK E G HR+ R+ +S Sbjct: 131 AYARYAELRGYKFEIVSQSEGNTGGFKEIILLIKGKGAYSRLKFEGGTHRVQRVPETESQ 190 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS ++ + P V+DS I+ +D RID R+SG GGQ VNTTDSAVRITHIPTG+ Sbjct: 191 GRVHTSAVTVAIMPEVEDSEIE-INPNDLRIDVMRSSGHGGQSVNTTDSAVRITHIPTGI 249 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYV 316 VV Q +SQHKNK A +L+A+LYE++ ++R +A K+++G G +IR+Y Sbjct: 250 VVTNQDGKSQHKNKEAAMKVLKARLYEIQEEER--VAKETSERKSQVGTGDRSGRIRTYN 307 Query: 317 LQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 P + D R N+ ++ G D+ ++ +A + Sbjct: 308 F-PQNRISDHRINLTLYRLDAIMAAGLFDEIIEPLIAHYQ 346 >gi|308810022|ref|XP_003082320.1| COG0216: Protein chain release factor A (ISS) [Ostreococcus tauri] gi|116060788|emb|CAL57266.1| COG0216: Protein chain release factor A (ISS) [Ostreococcus tauri] Length = 1699 Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats. Identities = 96/348 (27%), Positives = 167/348 (47%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + + LN + DP + + E + L + L+ + + + + + Sbjct: 59 LEATAKTHAELNERMADPEVTSDPKEFQRLSKACGELNYVVDLYARYRACVDEIEEARAM 118 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130 + + + E K E + D + LE+ AG GG E+ Sbjct: 119 VKDAAGDEEMVAMAREEIDALTEESDKLVEDMTLALLPKDPLDEKNIMLEIRAGTGGDEA 178 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY R+AE+ ++ + + + G K IKG + Y LK E GVHR+ Sbjct: 179 GIWAGDLYRMYMRFAEREGWQATVVTSNTADAGGFKEIVAEIKGADVYSNLKWEAGVHRV 238 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R TS +++ + P D +E++I E D I T R+ GAGGQ+VN ++A+ Sbjct: 239 QRVPATETQGRIQTSTATVAIMP-EVDEVEVQIDEKDLDISTARSGGAGGQNVNKVETAI 297 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ V C +ER+Q KN+ +A +LRAKL+E++L++++ I + K+++G G Sbjct: 298 DLMHKPTGIRVFCTEERTQLKNRIRAMQILRAKLFEIQLEEQQ--KAISDKRKSQVGSGS 355 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D R LDGD+ + A A+++ Sbjct: 356 RSEKIRTYNWKD-SRVSDHRIG-TNFPLQTFLDGDIKGAIGAMQALEQ 401 >gi|307942489|ref|ZP_07657838.1| peptide chain release factor 1 [Roseibium sp. TrichSKD4] gi|307774310|gb|EFO33522.1| peptide chain release factor 1 [Roseibium sp. TrichSKD4] Length = 359 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 120/346 (34%), Positives = 183/346 (52%), Gaps = 18/346 (5%) Query: 16 WDNAVQRLSFLNTKTE-DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + + R + L + +P + L RE L+ + I+ + + Sbjct: 7 LNTLLDRFAELEHQMSANP----DPSTYVKLSREYSGLEPLVHKIRTLIKAEEELAEAEA 62 Query: 75 LALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 + + D ++E ++ + + + + L AD+NDA LEV AG GG E Sbjct: 63 MLDDADTDPEMRELAEAERDELAASLETLTQDVRIGLLPKDSADANDAILEVRAGTGGDE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A L RMY R+AE +K E L +GE G K + G N + LK E GVHR Sbjct: 123 AALFAGDLFRMYQRFAELNGWKVEVLSASEGEVGGFKEVIASVSGENVFARLKFESGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS +++ V P + ++IEI+ESD RIDT+RASGAGGQHVNTTDSA Sbjct: 183 VQRVPATESGGRIHTSAATVAVLP-QAEDVDIEINESDLRIDTFRASGAGGQHVNTTDSA 241 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH PTG+VV Q ERSQHKNKA+A +LRA++Y+ ++ + E+ + ++G G Sbjct: 242 VRITHEPTGIVVAVQDERSQHKNKARAMQLLRARIYD--EERARAASERTEARRVQVGSG 299 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351 +IR+Y P V D R + ++ G+ L + ++A + Sbjct: 300 DRSERIRTYNF-PQGRVTDHRIGLTLYKLEQIIAGEGLAEVVEALI 344 >gi|146283094|ref|YP_001173247.1| peptide chain release factor 1 [Pseudomonas stutzeri A1501] gi|145571299|gb|ABP80405.1| peptide chain release factor 1 [Pseudomonas stutzeri A1501] Length = 270 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 157/269 (58%), Positives = 202/269 (75%), Gaps = 1/269 (0%) Query: 85 LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 + + ++R++ +E +F + S E D N+ YL++ AG+GGTE+QDWAN+LLRMY RW Sbjct: 1 MNDIVAEVERLREILEKLEFRRMFSHEMDPNNCYLDIQAGSGGTEAQDWANILLRMYLRW 60 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 A+KR F E +E+ +GE AGIK AT+ IKG A+GWL+ E GVHRLVR SP+DS +RRHT Sbjct: 61 ADKRGFSAEIVELSEGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHT 120 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 SFS+++V P +DD +EIEI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH+PT VV CQ Sbjct: 121 SFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQ 180 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 ERSQH NK A MLRAKLYELE+QKR + E SK++IGWG QIRSYVL +K Sbjct: 181 NERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDSKSDIGWGHQIRSYVLDD-SRIK 239 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 DLRT +E++ VLDGDLD +++A+L Sbjct: 240 DLRTGVERSDCQKVLDGDLDGYLEASLKQ 268 >gi|113461617|ref|YP_719686.1| peptide chain release factor 2 [Haemophilus somnus 129PT] gi|112823660|gb|ABI25749.1| bacterial peptide chain release factor 2 (bRF-2) [Haemophilus somnus 129PT] Length = 260 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 149/259 (57%), Positives = 195/259 (75%), Gaps = 1/259 (0%) Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 ++ ++ +F + SG+ D+ D Y+++ AG+GGTE+QDW MLLRMY RWAE + FKTE Sbjct: 1 MEKKLAALEFRRMFSGQHDNCDCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTEL 60 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +E+ G+ AG+KSAT+ I G A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP Sbjct: 61 VEVSSGDVAGLKSATIRIAGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPE 120 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +DD IEIEI+ +D RID YRASGAGGQHVN T+SAVRITHIP+G+VVQCQ RSQH+NK Sbjct: 121 IDDDIEIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNGRSQHQNKD 180 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 QA L+AKLYE+E+ K+ E SK++IGWG QIRSYVL +KDLRT +E + Sbjct: 181 QAMKQLKAKLYEMEIMKKNADKQAMEDSKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRN 239 Query: 335 PSDVLDGDLDDFMKATLAI 353 VLDGDLD F++A+L Sbjct: 240 TQAVLDGDLDRFIEASLKA 258 >gi|167765221|ref|ZP_02437334.1| hypothetical protein BACSTE_03609 [Bacteroides stercoris ATCC 43183] gi|167696849|gb|EDS13428.1| hypothetical protein BACSTE_03609 [Bacteroides stercoris ATCC 43183] Length = 370 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 99/354 (27%), Positives = 169/354 (47%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V R ++T DP + + L +E + L + ++ KE L E+ Sbjct: 11 LEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMNARKEYMQVLNGIEEAKEI 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + L + + E + + DS +A LE+ GAGG E+ Sbjct: 71 IANETDAEMREMAREELDACQARQPELEEEIKLLLVPADPQDSRNAILEIRGGAGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYT++ E + ++ + ++G G K + G N YG LK E GVHR+ Sbjct: 131 IFAGDLFRMYTKYCEAKGWRLDISSANEGAAGGFKEIICSVTGDNVYGTLKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +S+ V P ++ + I+E + + DT+R+ GAGGQ+VN +S VR Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKVESGVR 249 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + + ++++C + R Q KNK +A + LR +Y+ E QK I +I K Sbjct: 250 LRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRK 307 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 T + G + IR+Y P + D R N + + +DGD+ D + + + Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360 >gi|254513973|ref|ZP_05126034.1| peptide chain release factor 2 [gamma proteobacterium NOR5-3] gi|219676216|gb|EED32581.1| peptide chain release factor 2 [gamma proteobacterium NOR5-3] Length = 280 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 152/278 (54%), Positives = 205/278 (73%), Gaps = 1/278 (0%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +A EE+D + + + +Q + +E +F + +GE D+N+A+L++ +G+GGTE+QDWA Sbjct: 1 MASEENDEAAVSDLELEIQGLLKVLELLEFRRMFNGEMDANNAFLDIQSGSGGTEAQDWA 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 MLLRMY RW E R F TE +E G+ AGIKSAT+ G A+GWL+ E GVHRLVR S Sbjct: 61 EMLLRMYLRWGESRGFTTELIEASGGDVAGIKSATIKFSGEYAFGWLRTETGVHRLVRKS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+DS +RRHTSF+S++V P +DD+IEIEI+ +D R+DTYRASGAGGQHVN TDSAVR+TH Sbjct: 121 PFDSGNRRHTSFASVFVAPEIDDNIEIEINPADLRVDTYRASGAGGQHVNKTDSAVRLTH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 P+G+VVQCQ ERSQH+N+ A +LR KLYE+E+ KR + E +K +IGWG QIRS Sbjct: 181 NPSGIVVQCQTERSQHQNRDNAMKLLRGKLYEMEVLKRNAEKQVMEDNKADIGWGSQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 YVL +KDLRTN+E ++ VLDG +D F++A+L Sbjct: 241 YVLD-ASRIKDLRTNVETSNTQAVLDGAIDQFIEASLK 277 >gi|13472970|ref|NP_104537.1| peptide chain release factor 1 [Mesorhizobium loti MAFF303099] gi|20139342|sp|Q98G93|RF1_RHILO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|14023718|dbj|BAB50323.1| peptide chain release factor 1 [Mesorhizobium loti MAFF303099] Length = 359 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 118/348 (33%), Positives = 188/348 (54%), Gaps = 18/348 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V+R L + P + E L + ++ +++++ + L + Sbjct: 10 DQVVKRFEMLEAQMSAGPA----PDAYVKMASEYAELQDMVAKVRQLRSAEHEQADLEAM 65 Query: 76 ALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 ++ + ++ ++ +RI+ + Q L AD +A LE+ AG GG E+ Sbjct: 66 LADKGTDAEMRALAEADLPDVEERIEALQKDIQILLLPKDAADDKNAILEIRAGTGGDEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A +R ++ E + DG+ G K + G + LK E GVHR+ Sbjct: 126 ALFAGDLFRMYERYAAERGWRFETVSASDGDAGGFKEIIATVSGKGVFAHLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +++ R HTS +++ V P + ++IEI D RIDT RASG+GGQHVNTTDSAV Sbjct: 186 QRVPATEASGRIHTSAATVAVLP-EAEEVDIEIRAEDIRIDTMRASGSGGQHVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG++V Q E+SQH+N+A+A +LRA+LY+LE K +E ES K+++G G Sbjct: 245 RITHLPTGIMV-VQAEKSQHQNRAKAMQILRARLYDLERSKADEER--SESRKSQVGSGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+ G+LD+ + A +A + Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMMGELDEIVDALIADHQ 348 >gi|148981822|ref|ZP_01816539.1| bacterial peptide chain release factor 2 (RF-2) [Vibrionales bacterium SWAT-3] gi|145960730|gb|EDK26070.1| bacterial peptide chain release factor 2 (RF-2) [Vibrionales bacterium SWAT-3] Length = 248 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 150/246 (60%), Positives = 191/246 (77%), Gaps = 1/246 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SGE D++D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FKTE +E+ +GE AG+K Sbjct: 1 MFSGEHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEVIEVSEGEVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 AT+ I G AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I I+I+ S Sbjct: 61 GATVRISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNITIDINPS 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ +RSQHKNK QA LRAKL+E Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LE+QK+ E +K++IGWG QIRSYVL +KDLRT IE + VLDGDLD F Sbjct: 181 LEIQKQNAEKQANEDTKSDIGWGSQIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDKF 239 Query: 347 MKATLA 352 ++A+L Sbjct: 240 IEASLK 245 >gi|325269739|ref|ZP_08136350.1| peptide chain release factor RF1 [Prevotella multiformis DSM 16608] gi|324987940|gb|EGC19912.1| peptide chain release factor RF1 [Prevotella multiformis DSM 16608] Length = 370 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 93/354 (26%), Positives = 158/354 (44%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R ++T DP + + L +E + L + + + + L ++ Sbjct: 11 LDGLEARYEEVSTLITDPSVIADQKRYVKLTKEYKDLGDIMDARRRYVNCLTTIKEAKDI 70 Query: 76 ALEEDDCSILQETSDNLQRIK----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + L + E + + D + +E+ GAGG E+ Sbjct: 71 IANESDAEMKEMAREELSENEGLQPKIEEEIKLLLVPKDPEDGKNVQMEIRGGAGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MY R+ +K+ +K + +G G K ++G N YG LK E GVHR+ Sbjct: 131 LFAGDLFNMYKRYCDKKGWKLSVTSVSEGAVGGFKEIDFAVEGENVYGTLKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P D I+E D + DT+R+SGAGGQ+VN +S VR Sbjct: 191 RVPATETQGRMHTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKVESGVR 249 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + + ++++C + R Q KNK +A + L +Y+ E QK I +I K Sbjct: 250 LRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTYIYDHEHQKY--IDDIASRRK 307 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 T + G + IR+Y P V D R ++GD+ + + A + Sbjct: 308 TLVSTGDRSAKIRTYNF-PQGRVTDHRIGFTTHDLQGFMNGDIQEMIDALTVAE 360 >gi|237721316|ref|ZP_04551797.1| peptide chain release factor 1 [Bacteroides sp. 2_2_4] gi|229449112|gb|EEO54903.1| peptide chain release factor 1 [Bacteroides sp. 2_2_4] Length = 370 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 102/354 (28%), Positives = 167/354 (47%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V R +T DP + + L +E + LD+ + KE L + + Sbjct: 11 LDGLVARFEETSTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYIQLLGNIEEAKNI 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAGGTESQ 131 E D + + + + + + + E L DS +A LE+ GAGG E+ Sbjct: 71 LANESDAEMREMAKEEMDNSQERLPVLEEEIKLMLVPADPQDSKNAILEIRGGAGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY ++ E + +K E ++G G K + G N YG LK E GVHR+ Sbjct: 131 IFAGDLFRMYAKFCETKGWKMEVSNANEGTAGGFKEVVCSVTGDNVYGILKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +S+ V P ++ + I+E + + DT+R+ GAGGQ+VN +S VR Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKVESGVR 249 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + +I ++++C + R Q KNK +A LR +Y+ E QK I +I K Sbjct: 250 LRYIWKNPNTGIAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIASKRK 307 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 T + G + IR+Y P + D R N + + +DGD+ D + + + Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360 >gi|290580477|ref|YP_003484869.1| putative peptide chain release factor 1 [Streptococcus mutans NN2025] gi|254997376|dbj|BAH87977.1| putative peptide chain release factor 1 [Streptococcus mutans NN2025] Length = 359 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 99/348 (28%), Positives = 164/348 (47%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L RE + ++ +E + + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDIVSDTKCFMKLSREEANSRETVAVYREYKQVVQNIADAQEM 66 Query: 76 ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + D L+E + + + E +F L D + LE+ AGG E+ Sbjct: 67 IKDASDDPELEEMAKEELKNSKVAKEEYEEKLKFLLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + +K E +E G+K ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLNMYQKYAENQGWKFEVMEASANGVGGLKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E EI D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ +G G Sbjct: 246 RIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILYDQ 350 >gi|145635061|ref|ZP_01790767.1| peptide chain release factor 2 [Haemophilus influenzae PittAA] gi|148826180|ref|YP_001290933.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [Haemophilus influenzae PittEE] gi|145267669|gb|EDK07667.1| peptide chain release factor 2 [Haemophilus influenzae PittAA] gi|148716340|gb|ABQ98550.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [Haemophilus influenzae PittEE] Length = 248 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 150/247 (60%), Positives = 192/247 (77%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ D+ D Y+++ AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+K Sbjct: 1 MFSGKHDACDCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ + G A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ + Sbjct: 61 SATIKVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA L+AKLYE Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LELQK+ E +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F Sbjct: 181 LELQKKNADKQAMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRF 239 Query: 347 MKATLAI 353 ++A+L Sbjct: 240 IEASLKA 246 >gi|119715986|ref|YP_922951.1| peptide chain release factor 1 [Nocardioides sp. JS614] gi|166223579|sp|A1SHH9|RF1_NOCSJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119536647|gb|ABL81264.1| bacterial peptide chain release factor 1 (bRF-1) [Nocardioides sp. JS614] Length = 357 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 120/351 (34%), Positives = 181/351 (51%), Gaps = 13/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + + + L + P + AK L + L + I +E+Q D Sbjct: 1 MFEAVEGMLAEHADLEQRLGAPETHADARLAKQLNQRYAALSSIIGAYRELQQLDDDIEA 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EL ++D + +E + R + E + + AD DA LEV +G GG ES Sbjct: 61 AREL--AQEDPAFAEEAAALTGRRQEVEERLRRLLVPRDAADDKDAILEVKSGEGGEESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGE 184 +A LLRMYTR+AE R +K E L+ + + G KS T+ + G Y LK E Sbjct: 119 LFAGDLLRMYTRYAEARGWKVEVLDAAESDLGGYKSVTVAVKAKGTPEPGEAPYALLKFE 178 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ +S R HTS + + V P + ++++I E+D RID +R+SG GGQ VN Sbjct: 179 GGVHRVQRVPVTESQGRVHTSAAGVLVLP-EAEQVDVQIDENDLRIDVFRSSGPGGQSVN 237 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVRITH+PTG+VV CQ E+SQ +N+ QA +LR++L +K + A S+ Sbjct: 238 TTDSAVRITHLPTGIVVSCQNEKSQLQNREQAMRILRSRLLAAAQEKADAEAGEARRSQV 297 Query: 305 E-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +IR+Y P + D RT + + VLDGDL + + + Sbjct: 298 RTVDRSERIRTYNF-PENRISDHRTGYKAYNLDQVLDGDLQPVLDSCVEAD 347 >gi|256820779|ref|YP_003142058.1| peptide chain release factor 1 [Capnocytophaga ochracea DSM 7271] gi|315223922|ref|ZP_07865767.1| peptide chain release factor RF1 [Capnocytophaga ochracea F0287] gi|256582362|gb|ACU93497.1| peptide chain release factor 1 [Capnocytophaga ochracea DSM 7271] gi|314946094|gb|EFS98098.1| peptide chain release factor RF1 [Capnocytophaga ochracea F0287] Length = 357 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 97/350 (27%), Positives = 169/350 (48%), Gaps = 12/350 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + QR ++ P + + L +E + L + E + + Sbjct: 1 MLDKLNIVKQRFDEVSDLIIQPDIIADQKRYIQLNKEYKDLKELMDKRDEYINVTGNLQE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAGG 127 E+ + D +++ L+ K + + E D+ +A +E+ AG GG Sbjct: 61 AEEIIADGSDAEMVEMAKLQLEESKERLPQLEEEIKYMLIPKDPEDAKNAVMEIRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYT++ + + + T ++ ++G G K + G N YG LK E GV Sbjct: 121 DEASIFAGDLYRMYTKYCQSKGWSTSVMDFNEGTAGGYKEIIFEVTGDNVYGTLKFEAGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS +++ V P ++ + +D +I ++G GGQ VNTT Sbjct: 181 HRVQRVPQTETQGRVHTSAATVIVLPEAEEFDVE-LDMADVKIIRTTSTGPGGQSVNTTY 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SA+++ HIPTG+ V+CQ E+SQHKN +A +LR++LYE+EL K+ E K+ + Sbjct: 240 SAIQLQHIPTGIEVRCQDEKSQHKNLEKALKVLRSRLYEMELAKKME--ADSARRKSMVS 297 Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 G + IR+Y P V D R + +V++GD+ + + Sbjct: 298 SGDRSAKIRTYNY-PQGRVTDHRIGLTLYDLQNVINGDVQRLIDELQLAE 346 >gi|261366981|ref|ZP_05979864.1| peptide chain release factor 1 [Subdoligranulum variabile DSM 15176] gi|282571098|gb|EFB76633.1| peptide chain release factor 1 [Subdoligranulum variabile DSM 15176] Length = 359 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 105/350 (30%), Positives = 172/350 (49%), Gaps = 11/350 (3%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 +R L + P +M++ + L + + Sbjct: 4 FLQLHEVERRYEELAYRMSAPDAAAQPDVYARMMKDYKELTPLVEEYRRYTSLQQQQTET 63 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGT 128 EL +E D + L I + + L D + LE+ AGAGG Sbjct: 64 NELVQQETDPAFKAMVQQELCEIARNLAQSEENLRLLLLPKDADDEKNVILEIRAGAGGE 123 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A+ L RMYT +A KR + + + ++ E G+K ++G + Y LK E GVH Sbjct: 124 EAALFAHSLWRMYTMYASKRGWSCQTISANETELGGVKEVVFSVEGADVYSRLKFESGVH 183 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ ++ R HTS ++ V P + +E+E+ D RIDT+R+SGAGGQH+N T S Sbjct: 184 RVQRVPETETQGRIHTSTVTVAVMP-EAEEVELELDPKDLRIDTFRSSGAGGQHINKTSS 242 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 A+R+TH+PTG+VV+CQ +RSQ +NK +A +LR++L L+ +++ E ++++G Sbjct: 243 AIRVTHLPTGMVVECQDQRSQRENKERALTVLRSRL--LQQKQQAYDEAYNEKRQSQVGT 300 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + + VLDGDLD ++ + + Sbjct: 301 GDRSEKIRTYNF-PQDRVTDHRIGLTLRNLQGVLDGDLDRVLEPLILADR 349 >gi|86138685|ref|ZP_01057258.1| peptide chain release factor 1 [Roseobacter sp. MED193] gi|85824745|gb|EAQ44947.1| peptide chain release factor 1 [Roseobacter sp. MED193] Length = 361 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 123/344 (35%), Positives = 174/344 (50%), Gaps = 12/344 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +QR +L + + E L RE + I + L D + Sbjct: 17 LEQILQRFQYLEAAMAEG---ASGAEIANLAREYSEIKPVAEQITAYRQLLTDLEDAEAM 73 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + E L+ E Q L AD+ A LE+ G GG E+ +A Sbjct: 74 LSDPDMKELAAEEIPELKAALPGAEEALQLALLPKDAADARPAMLEIRPGTGGDEAALFA 133 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE R +K E +E E GIK IKG N + +K E GVHR+ R+ Sbjct: 134 GDLLRMYQRYAEARGWKFEVIEEQATELGGIKEVVAHIKGENVFARMKYESGVHRVQRVP 193 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P ++++I SD RIDT RASGAGGQHVNTTDSAVRITH Sbjct: 194 VTESGGRIHTSAATVAVLP-EAQEVDVQIDPSDIRIDTMRASGAGGQHVNTTDSAVRITH 252 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTGV+V E+SQH+N+ A +LRA+LY+LE Q+ + +++G G + Sbjct: 253 IPTGVMV-VSAEKSQHRNREIAMQVLRARLYDLERQRVDSER--SADRASQVGSGDRSER 309 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++ GDLD+ + A A + Sbjct: 310 IRTYNF-PQGRMSDHRINLTLYKLDQIMQGDLDEIIDALTADNQ 352 >gi|237785868|ref|YP_002906573.1| peptide chain release factor 1 [Corynebacterium kroppenstedtii DSM 44385] gi|259585217|sp|C4LJM5|RF1_CORK4 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|237758780|gb|ACR18030.1| peptide chain release factor RF-1 [Corynebacterium kroppenstedtii DSM 44385] Length = 357 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 113/346 (32%), Positives = 177/346 (51%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ V L + DP L + A+ + + L I + D E+ Sbjct: 8 VDDIVSEYQGLEAQLADPDLHNDAARARKVGKRFSELQPIIQTNDRLNAVTDDLEAAEEM 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A E+ + + E + + D +D +EV +GAGG E+ +A Sbjct: 68 AHEDQEFAAEAERLREEKEELSDKLADLL--APRDPHDGDDIVMEVKSGAGGEEAALFAG 125 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190 L+RMY R+A+K F + L+ + GIK T+ I+ A+ K E GVHR+ Sbjct: 126 ELVRMYQRYADKHGFAIDVLDDAPTDLGGIKDITMSIRSKKPSRDGAWSVFKFEGGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R TS + + VYP D+ ++EI + D R+D YR+SG GGQ VNTTDSAV Sbjct: 186 QRVPVTESQGRIQTSAAGVLVYPEPDEIEDVEIDDKDIRVDVYRSSGKGGQGVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG++V CQ+ERSQ +NKA+A +L A+L +++ ++ E A+ +++ + Sbjct: 246 RITHLPTGLIVTCQKERSQIQNKARAMQVLAARLQQMKEEEAEAAASADRAAQVRTMDRS 305 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N + + VLDGDLDD A + ++ Sbjct: 306 ERIRTYNF-PENRISDHRINYKAHNLDQVLDGDLDDLFSALQSAER 350 >gi|171057271|ref|YP_001789620.1| peptide chain release factor 1 [Leptothrix cholodnii SP-6] gi|238689096|sp|B1XYX1|RF1_LEPCP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|170774716|gb|ACB32855.1| peptide chain release factor 1 [Leptothrix cholodnii SP-6] Length = 360 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 114/336 (33%), Positives = 177/336 (52%), Gaps = 7/336 (2%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 RL+ ++ DP + + + L RE + + + + R D EL E + Sbjct: 15 RLAEIDAALADPKVCSQIGTLRSLNREHARVSALVDRWQRYEQREQDLAGAQELLDEPEM 74 Query: 82 CSILQETSDNLQRIKLEVEYKQF-ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 + + Q ++ + + D +A++E+ AG GG ES +A L RM Sbjct: 75 AELARAEIGAAQADLDRLDSELLTALMPRDADDDRNAFVEIRAGTGGEESALFAADLARM 134 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y R AE+R +KTE + + G K L I G + LK E G HR+ R+ ++ Sbjct: 135 YLRHAERRGWKTELMSESVSDLGGYKDVVLHIIGDAVFEALKYESGGHRVQRVPATEAQG 194 Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS ++ V D++ E+ ++ ++ RIDTYRASGAGGQH+N TDSAVR+TH+PTG+V Sbjct: 195 RIHTSACTVAVLAEADEAEEVSLNPAELRIDTYRASGAGGQHINKTDSAVRVTHLPTGLV 254 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317 +CQ +RSQH+NKA+A +L A+L + ++E+ A + K+ IG G +IR+Y Sbjct: 255 AECQDDRSQHRNKARALAVLAARLRD--RVRQEQAAKDAAARKSLIGSGDRSDRIRTYNF 312 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 P + D R N+ VL+GDLD+ + A A Sbjct: 313 -PQGRLTDHRINLTLYKLGAVLEGDLDEVIGALQAA 347 >gi|300727227|ref|ZP_07060643.1| peptide chain release factor 1 [Prevotella bryantii B14] gi|299775465|gb|EFI72059.1| peptide chain release factor 1 [Prevotella bryantii B14] Length = 370 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 94/359 (26%), Positives = 157/359 (43%), Gaps = 20/359 (5%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + + R ++T DP + + L +E + L + + K L Sbjct: 6 SILEKLEGLESRFEEVSTLITDPSVIADQPRFVKLTKEYKDLSDIMDARKRYIACLNSIK 65 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAG 126 ++ E D + + + L + + E D+ + +E+ AGAG Sbjct: 66 EAKDILANESDPDMKEMAREELSENEALQPKLEEEIKIALVPKDPEDAKNVQMEIRAGAG 125 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L MY ++ +KR + +G G K I G N YG LK E G Sbjct: 126 GDEAALFAGDLFNMYKKYCDKRGWTLSITSTSEGAVGGFKEIDCAISGDNVYGVLKYESG 185 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ ++ R HTS +++ V P D I+E D + DT+R+SGAGGQ+VN Sbjct: 186 VHRVQRVPATETQGRMHTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKV 244 Query: 247 DSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 +S VR+ + ++++C + R Q KNK +A + L +Y+ E QK + +I Sbjct: 245 ESGVRLRYPWKNPNTGEIEEILIECTETRDQPKNKERALSRLYTYIYDHEHQKYLD--DI 302 Query: 299 GESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+ + G + IR+Y P V D R L+GD+ D + A + Sbjct: 303 SSRRKSLVSTGDRSAKIRTYNF-PQGRVTDHRIGYTTHDLQGFLNGDIQDMIDALTVAE 360 >gi|148656981|ref|YP_001277186.1| peptide chain release factor 1 [Roseiflexus sp. RS-1] gi|148569091|gb|ABQ91236.1| bacterial peptide chain release factor 1 (bRF-1) [Roseiflexus sp. RS-1] Length = 364 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 112/349 (32%), Positives = 171/349 (48%), Gaps = 14/349 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 N R + L P + + + + +RE++ L+ + + +D L Sbjct: 9 LANVAARYNELLDLMAQPEIATDPVRLQQYVREQRDLEPLVEAYQAYRDVERQIEDTRFL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + Q + L + + L DS + +E+ G GG E+ Sbjct: 69 LANETDPEVRQLAQEELDHLIERRARLETDIKVLLLPRDPNDSKNVIMELRQGEGGDEAA 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYTR+AE+R + + + + G K IKG AY LK E GVHR+ Sbjct: 129 LFAADLFRMYTRYAEQRGWDVDVISATENGPGGYKEIVFEIKGEGAYSRLKYEGGVHRVQ 188 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P ++++ ++ SD R+D +R+SG GGQ VNTTDSAVR Sbjct: 189 RVPATEARGRIHTSTATVAVLPEIEETEIE-LNPSDYRVDVFRSSGHGGQGVNTTDSAVR 247 Query: 252 ITHIP---TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 I + P +VV CQ RSQ KNKA A +LRA+LY E +KR + +GES ++G Sbjct: 248 IVYKPGTPEEIVVTCQDSRSQLKNKASALAVLRARLYAREEEKRRKE--LGESRLAQVGA 305 Query: 309 GRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 G + IR+Y P V D R ++ +LDGDLD + A + Sbjct: 306 GERAEKIRTYNF-PQDRVTDHRIGQNFSNLPGILDGDLDRLIDALIIAD 353 >gi|163846084|ref|YP_001634128.1| peptide chain release factor 1 [Chloroflexus aurantiacus J-10-fl] gi|222523819|ref|YP_002568289.1| peptide chain release factor 1 [Chloroflexus sp. Y-400-fl] gi|189039962|sp|A9WE79|RF1_CHLAA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790872|sp|B9LJ02|RF1_CHLSY RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|163667373|gb|ABY33739.1| peptide chain release factor 1 [Chloroflexus aurantiacus J-10-fl] gi|222447698|gb|ACM51964.1| peptide chain release factor 1 [Chloroflexus sp. Y-400-fl] Length = 360 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 113/352 (32%), Positives = 170/352 (48%), Gaps = 14/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD R L P + NV + RE++ +++ ++ +E Q Sbjct: 1 MFDKLAAVAARYDELTELMAQPEVATNVTLLQQYAREQREIEDIVNAYREYQATQRAIEE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 + + D + + K E + L DS D +E+ G GG Sbjct: 61 AEAMLEDSDPELRALAQEELETQRKRLASLEEQLKLLLLPRDPNDSKDVIMEIRQGEGGD 120 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMYTR+AE R +K E + + GIK I G AY LK E GVH Sbjct: 121 EAALFAADLFRMYTRFAESRGWKVEVDSLTENGIGGIKEVIFQIHGEGAYSQLKYEGGVH 180 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ ++ R HTS +++ V P V+++ I D RID +R++G GGQ VNTTDS Sbjct: 181 RVQRVPATEARGRIHTSTATVAVLPEVEETEIE-IKPEDLRIDVFRSAGHGGQGVNTTDS 239 Query: 249 AVRITHIP---TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 AVRI + P +VV CQ RSQ +N+ +A +LRA+LY E +KR+ IG S + Sbjct: 240 AVRIVYKPGTPEEIVVTCQDGRSQIQNRERAMTVLRARLYAREQEKRQ--REIGASRLAQ 297 Query: 306 IGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +G G + IR+Y P + D R ++ VLDG+LD ++A + Sbjct: 298 VGSGERAEKIRTYNF-PQDRITDHRIGQNFSNLPAVLDGELDKIIEALIIYD 348 >gi|224373415|ref|YP_002607787.1| peptide chain release factor 1 [Nautilia profundicola AmH] gi|254790893|sp|B9L5Z9|RF1_NAUPA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|223590043|gb|ACM93779.1| peptide chain release factor 1 [Nautilia profundicola AmH] Length = 355 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 106/348 (30%), Positives = 177/348 (50%), Gaps = 12/348 (3%) Query: 16 WDNAV---QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 D ++ + +N P + Q++ L RE + L+ + KE ++ + Sbjct: 3 LDKLKPFVEKYNEINQMLSSPEITQDIKRMTKLSREARSLEPIVEKAKEYENIINTIEEA 62 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 + + + + +E + E+E + L D + +LE+ AG GG E+ Sbjct: 63 KMMLDDPEMAELAKEELKEAEEKLPELEEEIKILLLPKDPNDDKNIFLEIRAGTGGDEAA 122 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + LL+ Y R+A+ + +K E + + G K LLIKG + Y LK E G HR+ Sbjct: 123 LFVGDLLKAYLRYADNKGWKVEIVSESKSDAGGYKEIILLIKGESVYSRLKYEGGTHRVQ 182 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS ++ + P D ++IE+ D +I+ RA GAGGQHVN T+SAVR Sbjct: 183 RIPATESQGRIHTSAVTVAIMP-EVDDVDIELDPKDIKIEVMRAGGAGGQHVNKTESAVR 241 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTG+ V Q ERSQ +NK +A +L+A+++ E + E +A IGE+ K+++G G Sbjct: 242 MTHIPTGITVSMQDERSQQRNKEKAMQILKARVF--EKLENERLAAIGEARKSQVGSGDR 299 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 +IR+Y P + D R + ++ +G D+ + +A + Sbjct: 300 SERIRTYNY-PQNRITDHRIGLTLYRLEQIMSEGLFDEIIDPLIAHYQ 346 >gi|290954114|ref|ZP_06558735.1| peptide chain release factor 2 [Francisella tularensis subsp. holarctica URFT1] gi|295312499|ref|ZP_06803267.1| peptide chain release factor 2 [Francisella tularensis subsp. holarctica URFT1] Length = 241 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 145/238 (60%), Positives = 182/238 (76%), Gaps = 1/238 (0%) Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 N A+L++ +G+GGTE+QDWA ML+RMY RWA+ FK ++ DG+ AGIK TL I+G Sbjct: 2 NKAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGFKVTVDDVSDGDVAGIKGCTLKIEG 61 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S+++ P VDD I+IEI+ +D R+DTYR Sbjct: 62 EYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVFISPEVDDDIDIEINPADLRVDTYR 121 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 ASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQHKN+ A L++KLYE+ELQKR Sbjct: 122 ASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQHKNRDNAMKQLKSKLYEMELQKRNA 181 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 N E SK +IGWG QIRSYVL +KDLRT +E T+ VLDGDLD F++A+L Sbjct: 182 EKNALEDSKADIGWGSQIRSYVLD-QSRIKDLRTGVENTNTQAVLDGDLDKFIEASLK 238 >gi|289663374|ref|ZP_06484955.1| peptide chain release factor 2 [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289668830|ref|ZP_06489905.1| peptide chain release factor 2 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 276 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 153/259 (59%), Positives = 198/259 (76%), Gaps = 1/259 (0%) Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + VE +F+ + SG+ D +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE Sbjct: 8 YQTHVEKLEFQRMFSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTEL 67 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +E+ GE AGIKSAT+ I+G AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P Sbjct: 68 MEVSGGEVAGIKSATIRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPE 127 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 VDD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT VV CQ RSQH+N+ Sbjct: 128 VDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRD 187 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A ML AKLYELE+QKR + E++K++IGWG QIR+YVL +KDLRT IE++ Sbjct: 188 NAMKMLAAKLYELEVQKRNVERDALEATKSDIGWGSQIRNYVLD-QSRIKDLRTGIERSD 246 Query: 335 PSDVLDGDLDDFMKATLAI 353 VLDGDLD+F++A+L Sbjct: 247 TQKVLDGDLDEFVEASLKA 265 >gi|328794147|ref|XP_003252002.1| PREDICTED: peptide chain release factor 2-like, partial [Apis mellifera] Length = 276 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 139/265 (52%), Positives = 182/265 (68%) Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 +LQ+++ E + + LLSG+ DS++A +E+H GAGGTE+ DW MLLRMY R+A+ Sbjct: 4 ETDLQKLQSEFHNYELDLLLSGKYDSHNALIEIHPGAGGTEAMDWGQMLLRMYQRYADIC 63 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E GEEAG+KS + + G NAYG +K E GVHRLVRISP+DS RRHTSF+S Sbjct: 64 GFKFEINNYEPGEEAGLKSVSAKVCGKNAYGLMKSENGVHRLVRISPFDSAKRRHTSFAS 123 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P +DDSI+++I+ D RID YR+SGAGGQH+N T SAVRITH+PTG V Q +RS Sbjct: 124 VEVIPEIDDSIKVDINPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGFVTTSQAQRS 183 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q +N+ A N LRAKL+ LE +K+ + + + EIGWG QIRSYV PY +VKDLRT Sbjct: 184 QLQNRETAMNELRAKLFHLEEEKKRQHKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRT 243 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353 E + S V+DG L F+ + L Sbjct: 244 GYETSDTSGVMDGKLQPFVYSYLQW 268 >gi|295134987|ref|YP_003585663.1| peptide chain release factor 1 [Zunongwangia profunda SM-A87] gi|294983002|gb|ADF53467.1| peptide chain release factor 1 [Zunongwangia profunda SM-A87] Length = 358 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 98/342 (28%), Positives = 167/342 (48%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + QR +N P + + L +E + L ++ + + + E+ Sbjct: 5 LNIVKQRFDEVNDLIIQPDIIADQKRYVELNKEYKDLRALMNERERYIELTDNLKEAEEI 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 + D + + + K E+ + + D+ + +E+ AG GG E+ Sbjct: 65 ISDGSDPEMTEMAKLQQEEAKQELPALEEKIRMMLVPKDPEDAKNVVMEIRAGTGGDEAS 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYT++ E + + ++ +G G K + G + YG +K E GVHR+ Sbjct: 125 IFAGDLYRMYTKYVESKGWSHNIVDFSEGTSGGFKEMIFEVSGEDVYGTMKFEAGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P ++ I D RID + +SG GGQ VNTT SAVR Sbjct: 185 RVPQTETQGRVHTSAATVMVLPEAEEFDVE-IDPKDVRIDYFCSSGPGGQSVNTTYSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +TH PTG+V QCQ ++SQHKN+ +A+ +LR++LYE+EL K+ E + + G + Sbjct: 244 LTHEPTGLVAQCQDQKSQHKNREKAFRVLRSRLYEIELAKKME--ADAAKRNSMVSSGDR 301 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P V D R N+ S++++GD+ + Sbjct: 302 SAKIRTYNY-PQGRVTDHRINLTLYDLSNIVNGDIQKIIDEL 342 >gi|251799802|ref|YP_003014533.1| peptide chain release factor 1 [Paenibacillus sp. JDR-2] gi|247547428|gb|ACT04447.1| peptide chain release factor 1 [Paenibacillus sp. JDR-2] Length = 356 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 103/351 (29%), Positives = 179/351 (50%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68 + D R L+ DP + + + +E+ L A E + +L D Sbjct: 1 MLDRLQALADRYEKLSELLCDPDVASDPKRLREYSKEQSDLQEAYEAFTEYKQVSEQLED 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 ++ L+++ +++ D L K E + L D + +E+ AGG Sbjct: 61 AKLMQGEKLDDEMREMVKMEIDELTERKTALDEKIRIVLLPKDPNDDKNVIVEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYT++A+ + ++ E +++++ + G K +I G AY +K E G Sbjct: 121 DEAALFAYELYRMYTKFADAQGWRCELMDLNENDLGGFKEVIFMITGKGAYSKMKYESGA 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +S R HTS S++ + +E+EI + D RIDT+ +SGAGGQ VNTT Sbjct: 181 HRVQRIPVTESGGRIHTSTSTVS-VMPEVEEVEVEILDKDIRIDTFCSSGAGGQSVNTTK 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+ H+PTG++ CQ +SQ++NKA+A +LRA++ ++ +++EE A K ++G Sbjct: 240 SAVRVLHVPTGIMATCQDGKSQNENKAKALQVLRARISDI--RRQEEEAKYAGERKLKVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + V++GD+ + + + ++ Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTLHKLDSVMNGDMAEIVSSLTIAEQ 347 >gi|225010612|ref|ZP_03701082.1| peptide chain release factor 1 [Flavobacteria bacterium MS024-3C] gi|225005165|gb|EEG43117.1| peptide chain release factor 1 [Flavobacteria bacterium MS024-3C] Length = 358 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 101/339 (29%), Positives = 171/339 (50%), Gaps = 11/339 (3%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 QR ++ P + Q+ L +E + L + + + + E+ + Sbjct: 8 VKQRFDEVSDLIIQPDIIQDQKRYVQLNKEYKDLKSLMDKRELYISFTNNIEESQEIIDD 67 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 D +++ L K + + F + D+ + +E+ AG GG E+ +A Sbjct: 68 GSDAEMVEMAKMQLDEAKAALPALEEEIKFLLIPKEPEDAKNVVVEIRAGTGGDEASIFA 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMYT++ E R +KT +++ +G G K + G + YG LK E GVHR+ R+ Sbjct: 128 GDLFRMYTKYCESRGWKTNVIDLSEGTSGGYKEIQFEVNGEDVYGTLKFEAGVHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS +++ V P ++ I D RID + +SG GGQ VNTT SAVR+TH Sbjct: 188 QTETQGRVHTSAATVMVLPEAEEFDVQ-IDPKDVRIDFFCSSGPGGQSVNTTYSAVRLTH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 +PTG+V QCQ ++SQHKNK +A+ +LR++LY++EL K++E +++ G + Sbjct: 247 LPTGLVAQCQDQKSQHKNKDKAFVVLRSRLYDMELAKKQE--ADAAKRNSQVSSGDRSAK 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P V D R + ++++GD+ + Sbjct: 305 IRTYNY-PQGRVTDHRIGLTLYDLQNIVNGDIQKILSEL 342 >gi|322374351|ref|ZP_08048865.1| peptide chain release factor 1 [Streptococcus sp. C300] gi|331266424|ref|YP_004326054.1| peptide chain release factor 1 [Streptococcus oralis Uo5] gi|321279851|gb|EFX56890.1| peptide chain release factor 1 [Streptococcus sp. C300] gi|326683096|emb|CBZ00714.1| peptide chain release factor 1 [Streptococcus oralis Uo5] Length = 359 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 97/348 (27%), Positives = 161/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + L + + ++ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEDM 66 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E G K ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350 >gi|319776546|ref|YP_004139034.1| peptide chain release factor 2 [Haemophilus influenzae F3047] gi|317451137|emb|CBY87370.1| peptide chain release factor 2 [Haemophilus influenzae F3047] Length = 248 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 150/247 (60%), Positives = 193/247 (78%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SGE D+ + Y+++ AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+K Sbjct: 1 MFSGEHDACNCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ + G A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ + Sbjct: 61 SATIKVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA L+AKLYE Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LELQK+ + E +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F Sbjct: 181 LELQKKNADKQVMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRF 239 Query: 347 MKATLAI 353 ++A+L Sbjct: 240 IEASLKA 246 >gi|227503858|ref|ZP_03933907.1| peptide chain release factor 1 [Corynebacterium striatum ATCC 6940] gi|227199481|gb|EEI79529.1| peptide chain release factor 1 [Corynebacterium striatum ATCC 6940] Length = 358 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 112/346 (32%), Positives = 174/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ V + + DP + + + L + L ++ ++ D E+ Sbjct: 8 VDDIVSEYQGIEMQMGDPEVAGDQKLFRKLSKRYAELRPIVAVNNDLVQARQDLEDAKEM 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D E + E E DS D +E+ AGAGG E+ +A Sbjct: 68 --AYEDHDFQDEVDRLEPLVVELEEKLADLLAPRDEHDSEDIIMEIKAGAGGEEAALFAG 125 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190 L RMY R+A+K F+ E L +++ + G+K ++ K A+ K E GVHR+ Sbjct: 126 DLARMYERFADKAGFQWEVLGLNESDLGGVKDMSISFKSKTPSRDGAWSVFKFEGGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R TS + + VYP D+ + I E D R+D YR+SG GGQ VNTTDSAV Sbjct: 186 QRVPVTESQGRIQTSAAGVLVYPEPDEVESVNIDEKDLRVDVYRSSGKGGQGVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG+VV CQ+ERSQ +NKA+A +L+A+L ++E + RE A +S+ + Sbjct: 246 RITHLPTGLVVTCQKERSQIQNKARALQVLQARLDQIEREAREAEAGEQRASQVRTLDRS 305 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + + VL+GD+ D + A A ++ Sbjct: 306 ERIRTYNW-PENRITDHRIGYKANNLDAVLNGDMQDLITALQAQER 350 >gi|145631266|ref|ZP_01787039.1| peptide chain release factor 2 [Haemophilus influenzae R3021] gi|145633057|ref|ZP_01788789.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [Haemophilus influenzae 3655] gi|145637033|ref|ZP_01792696.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [Haemophilus influenzae PittHH] gi|145639267|ref|ZP_01794873.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [Haemophilus influenzae PittII] gi|145641183|ref|ZP_01796763.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [Haemophilus influenzae R3021] gi|148828361|ref|YP_001293114.1| peptide chain release factor 2 [Haemophilus influenzae PittGG] gi|229844833|ref|ZP_04464971.1| peptide chain release factor 2 [Haemophilus influenzae 6P18H1] gi|229846242|ref|ZP_04466354.1| peptide chain release factor 2 [Haemophilus influenzae 7P49H1] gi|319897322|ref|YP_004135518.1| peptide chain release factor 2 [Haemophilus influenzae F3031] gi|144983193|gb|EDJ90688.1| peptide chain release factor 2 [Haemophilus influenzae R3021] gi|144986283|gb|EDJ92862.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [Haemophilus influenzae 3655] gi|145269687|gb|EDK09627.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [Haemophilus influenzae PittHH] gi|145271570|gb|EDK11481.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [Haemophilus influenzae PittII] gi|145274020|gb|EDK13886.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [Haemophilus influenzae 22.4-21] gi|148719603|gb|ABR00731.1| peptide chain release factor 2 [Haemophilus influenzae PittGG] gi|229811246|gb|EEP46963.1| peptide chain release factor 2 [Haemophilus influenzae 7P49H1] gi|229812214|gb|EEP47905.1| peptide chain release factor 2 [Haemophilus influenzae 6P18H1] gi|317432827|emb|CBY81192.1| peptide chain release factor 2 [Haemophilus influenzae F3031] Length = 248 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 151/247 (61%), Positives = 192/247 (77%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SGE D+ D Y+++ AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+K Sbjct: 1 MFSGEHDACDCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ + G A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ + Sbjct: 61 SATIKVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA L+AKLYE Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LELQK+ E +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F Sbjct: 181 LELQKKNADKQAMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRF 239 Query: 347 MKATLAI 353 ++A+L Sbjct: 240 IEASLKA 246 >gi|197335699|ref|YP_002155207.1| peptide chain release factor 2 [Vibrio fischeri MJ11] gi|197317189|gb|ACH66636.1| peptide chain release factor 2 [Vibrio fischeri MJ11] Length = 248 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 148/246 (60%), Positives = 191/246 (77%), Gaps = 1/246 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ D++D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FK E +E+ +GE AG+K Sbjct: 1 MFSGDHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKVEVIEVSEGEVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 AT+ I G AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I+I+I+ S Sbjct: 61 GATVRIAGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNIQIDINPS 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVNTT+SAVRITH+PT +VVQCQ +RSQHKNK QA LRAKL+E Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLRAKLFE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ELQK+ E +K++IGWG QIRSYVL +KDLRT IE + VLDGDLD F Sbjct: 181 YELQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDKF 239 Query: 347 MKATLA 352 ++A+L Sbjct: 240 IEASLK 245 >gi|303237122|ref|ZP_07323692.1| peptide chain release factor 1 [Prevotella disiens FB035-09AN] gi|302482509|gb|EFL45534.1| peptide chain release factor 1 [Prevotella disiens FB035-09AN] Length = 370 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 94/359 (26%), Positives = 157/359 (43%), Gaps = 20/359 (5%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + D R ++T DP + + L +E + L + + K L Sbjct: 6 SILEKLDGLEARFLEVSTLITDPDVISDQQRYVKLTKEYKDLGDIMDARKRYIKCLTTIS 65 Query: 71 I----LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 L +E E S+N + + E + + D + +E+ AGAG Sbjct: 66 EAKDILTNETDQEMKEMARLELSENEELLPNLEEEIKLLLVPKDPEDDKNVQMEIRAGAG 125 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A + MY R+ +K+ + + +G G K + G YG LK E G Sbjct: 126 GDEAALFAGDIFNMYKRYCDKKGWNLSITSVSEGTVGGFKEIDFAVAGTGVYGILKYESG 185 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ D+ R TS +++ V P D I+E D + DT+R+SGAGGQ+VN Sbjct: 186 VHRVQRVPSTDTQGRMQTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKV 244 Query: 247 DSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 +S VR+ + ++++C + R Q KNK +A + LR +Y+ E QK + +I Sbjct: 245 ESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLRTFIYDREHQKY--VNDI 302 Query: 299 GESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+ + G + IR+Y P V D R ++GD+ D + A + Sbjct: 303 ASRRKSLVSTGDRSAKIRTYNY-PQGRVTDHRIGFTTHDLPGFMNGDIQDMIDALTVAE 360 >gi|257463869|ref|ZP_05628255.1| peptide chain release factor 2 [Fusobacterium sp. D12] Length = 326 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 154/324 (47%), Positives = 216/324 (66%), Gaps = 1/324 (0%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 + W + + L++ ++ + + + + + +L+E D+ S E + Sbjct: 2 EEGFWNDKKSSSALIKAMNEEKALLASFQSLVEEIEEEEVLIEFVEAGDE-SSQVELEEK 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 +++ ++E LL GE D N+A + +H+GAGGTE+ DWA+ML RMYTRW +K+K Sbjct: 61 HKQLLKDMESFSTGLLLDGEYDGNNAIVTIHSGAGGTEACDWADMLYRMYTRWCHDKKYK 120 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E ++ G+ GIKS T L+ G +AYG+LK E+G+HRLVRISP+D+N +RHTSF+S+ V Sbjct: 121 IEEMDFMPGDSVGIKSITFLVSGYHAYGYLKCEKGIHRLVRISPFDANKKRHTSFASVEV 180 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P VD+S+E+E+ +D RIDTYRASGAGGQH+N TDSAVRITH PTG+VV CQ+ERSQ Sbjct: 181 VPEVDESVEVEVEAADIRIDTYRASGAGGQHINMTDSAVRITHFPTGIVVTCQKERSQLN 240 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ A ML++KL ELEL+K+EE + ++EIGWG QIRSYV QPY MVKD RT +E Sbjct: 241 NRETAMKMLQSKLLELELKKKEEEMKKLQGEQSEIGWGSQIRSYVFQPYTMVKDHRTGVE 300 Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355 + V+DGDLD+FM L K Sbjct: 301 VGNIKAVMDGDLDEFMNGYLRWNK 324 >gi|146277160|ref|YP_001167319.1| peptide chain release factor 1 [Rhodobacter sphaeroides ATCC 17025] gi|166223594|sp|A4WRK0|RF1_RHOS5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|145555401|gb|ABP70014.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodobacter sphaeroides ATCC 17025] Length = 351 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 119/342 (34%), Positives = 179/342 (52%), Gaps = 12/342 (3%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 V+R FL + E L RE L ++ I + L D + Sbjct: 9 QIVRRFEFLEARLSAGAA---PAEIAALSREYAELKPVVAEIAAYRTALEDLAEAEAMLA 65 Query: 78 EEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 + + ++ ++ RI + + L AD+ A LE+ G GG E+ +A Sbjct: 66 DPEMRALAEDELPRLRARIPEMEQALRLALLPRDAADARPAILEIRPGTGGEEAALFAGD 125 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 LLRMY R+AE + ++ E L++ E GI+ AT I+G A+ LK E GVHR+ R+ Sbjct: 126 LLRMYQRYAEAQGWRFELLDLAPSELGGIREATARIEGEGAFARLKYESGVHRVQRVPET 185 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 ++ R HTS +++ V P + ++I I +D RIDT R+SGAGGQHVNTTDSAVRITH+P Sbjct: 186 EAQGRIHTSAATVAVLP-EAEEVDIAIPAADIRIDTMRSSGAGGQHVNTTDSAVRITHLP 244 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG+VV E+SQH+N+ A +LRA+LY+LE Q+ E K ++G G +IR Sbjct: 245 TGIVVTSS-EKSQHRNREIAMQVLRARLYDLERQRLAEAR--SADRKAQVGSGDRSERIR 301 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +Y P + D R N+ + ++ GDL + + A A + Sbjct: 302 TYNF-PQGRMTDHRINLTLYALPQIMAGDLAEVIAALTAHDQ 342 >gi|254446350|ref|ZP_05059826.1| peptide chain release factor 1 [Verrucomicrobiae bacterium DG1235] gi|198260658|gb|EDY84966.1| peptide chain release factor 1 [Verrucomicrobiae bacterium DG1235] Length = 408 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 108/339 (31%), Positives = 177/339 (52%), Gaps = 12/339 (3%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLELA 76 R+ ++ P + + + L RE+ L I + + +L +N +L+ + Sbjct: 55 KARVEEIDGLMSAPDFYSDARRSAALSREQIKLRQLIEDYDALDKAKQQLAENQEMLDDS 114 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFE--SLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + L E K+E ++ + E DS + +E+ AGAGG E+ +A Sbjct: 115 SGDAELKELAEMEIPELEEKVEKLEEKILKAMIPPDETDSRNTIVEIRAGAGGDEASLFA 174 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMYTR AE++ ++ E + + G K I G Y LK E GVHR+ R+ Sbjct: 175 ADLYRMYTRLAERKGWRVEQMSASESGIDGFKEVIFSITGEEVYKKLKLESGVHRVQRVP 234 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P + +++EI+ D + T RASGAGGQHVNTTDSA+ I H Sbjct: 235 ETESQGRIHTSTATVAVLP-EAEEVDVEINPQDLEVTTCRASGAGGQHVNTTDSAINIVH 293 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 PTG+ V C ERSQ KN+A+A +L +++ L++++ EE + E+ K ++G G + Sbjct: 294 KPTGITVYCADERSQIKNRAKAMKVLYSRI--LQVKQEEERSKYAENRKKQVGTGDRSER 351 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P + D R + S V+DGD+++ ++ Sbjct: 352 IRTYNF-PQSRLTDHRIGLTLHSLPAVMDGDMEEILETL 389 >gi|322387784|ref|ZP_08061393.1| peptide chain release factor RF1 [Streptococcus infantis ATCC 700779] gi|321141651|gb|EFX37147.1| peptide chain release factor RF1 [Streptococcus infantis ATCC 700779] Length = 359 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 98/348 (28%), Positives = 161/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + L + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E G K ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350 >gi|260914424|ref|ZP_05920893.1| peptide chain release factor RF2 [Pasteurella dagmatis ATCC 43325] gi|260631525|gb|EEX49707.1| peptide chain release factor RF2 [Pasteurella dagmatis ATCC 43325] Length = 248 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 150/247 (60%), Positives = 191/247 (77%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ D+ D Y+++ AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AGIK Sbjct: 1 MFSGQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ + G A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ + Sbjct: 61 SATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVN T+SAVRITHIP+G+VVQCQ +RSQHKNK Q L+AKLYE Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNDRSQHKNKDQCMKQLKAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 +ELQK+ E +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F Sbjct: 181 MELQKKNADKQAMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRF 239 Query: 347 MKATLAI 353 ++A+L Sbjct: 240 IEASLKA 246 >gi|49475009|ref|YP_033050.1| peptide chain release factor 1 [Bartonella henselae str. Houston-1] gi|61214620|sp|Q6G5T7|RF1_BARHE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|49237814|emb|CAF27009.1| Peptide chain release factor 1 [Bartonella henselae str. Houston-1] Length = 359 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 121/347 (34%), Positives = 183/347 (52%), Gaps = 18/347 (5%) Query: 18 NAVQRLSFLNTKTE-DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 +R + ++ +P N L E L +S I+ + + L + Sbjct: 11 QLEKRFEIIESQMAKNP----NAEIYVKLASEYAELQPIVSSIRALNALYGEITDLETII 66 Query: 77 LEEDDCSILQETSDN-----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ++ ++ + Q+++ + Q L AD A +E+ AG GG+E+ Sbjct: 67 SDKLTDVEMRTLAQEELPLLCQKMEQLEQKLQILLLPKDVADEKSAIVEIRAGTGGSEAA 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R+A R +K E + +++GE G K I G + LK E GVHR+ Sbjct: 127 LFAGDLFRMYERYAASRNWKVEVVSLNEGEVGGYKEIIATISGRGVFSKLKFESGVHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI ++ R HTS +++ V P + I+IEI D RIDT RASGAGGQHVNTTDSAVR Sbjct: 187 RIPETETGGRIHTSAATVAVLP-EAEEIDIEIRPEDIRIDTMRASGAGGQHVNTTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIPTG++V Q E+SQH+N+A+A +LRA+L+++E QK S K+++G G Sbjct: 246 ITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQK--AENERSASRKSQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ VL+GDLD+ + A ++ + Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLYKLDRVLEGDLDELIHALISDHQ 348 >gi|126462320|ref|YP_001043434.1| peptide chain release factor 1 [Rhodobacter sphaeroides ATCC 17029] gi|166223593|sp|A3PJZ6|RF1_RHOS1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|126103984|gb|ABN76662.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodobacter sphaeroides ATCC 17029] Length = 351 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 115/342 (33%), Positives = 180/342 (52%), Gaps = 12/342 (3%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 V+R FL + E L RE L ++ I + L D + Sbjct: 9 QIVRRFEFLEARLSAGAA---PAEIAALSREYAELKPVVAEISAYRTALEDLAEAEAMLS 65 Query: 78 EEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 + + ++ ++ L+ + + L AD+ A LE+ G GG E+ +A Sbjct: 66 DPEMRALAEDEIPALRARIPGMEQALRLALLPKDAADARPAILEIRPGTGGEEAALFAGD 125 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 LLRMY R+AE + ++ E L++ E GI+ AT ++G A+ LK E GVHR+ R+ Sbjct: 126 LLRMYQRYAEGQGWRFELLDLAPSELGGIREATARVEGEGAFARLKYESGVHRVQRVPET 185 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 ++ R HTS +++ V P + +++EI +D RIDT R+SGAGGQHVNTTDSAVRITH+P Sbjct: 186 EAQGRIHTSAATVAVLP-EAEEVDLEIPAADIRIDTMRSSGAGGQHVNTTDSAVRITHLP 244 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG++V E+SQH+N+ A +LRA+LY+LE Q+ + K ++G G +IR Sbjct: 245 TGIIVTSS-EKSQHRNREIAMQVLRARLYDLERQRLADAR--SADRKAQVGSGDRSERIR 301 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +Y P + D R N+ + ++ GDL + + A A + Sbjct: 302 TYNF-PQGRMTDHRINLTLYALPQIMAGDLSEVISALTAHDQ 342 >gi|270292697|ref|ZP_06198908.1| peptide chain release factor 1 [Streptococcus sp. M143] gi|270278676|gb|EFA24522.1| peptide chain release factor 1 [Streptococcus sp. M143] Length = 359 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 98/348 (28%), Positives = 161/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + L + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIIDAEEM 66 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKESGGDADLEEMAKQELKDAKSEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E G K ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350 >gi|189485187|ref|YP_001956128.1| peptide chain release factor 1 [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|238054475|sp|B1GZI5|RF1_UNCTG RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|170287146|dbj|BAG13667.1| peptide chain release factor 1 [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 356 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 107/356 (30%), Positives = 176/356 (49%), Gaps = 19/356 (5%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KE 61 +L L +F + +K D + N E + L ++ +L + Sbjct: 4 EKLKLLNSIF---------EEVESKLSDLSVISNQEEYRELTKQHFYLRPLAEKYIRYSK 54 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + D L + E E ++ +++ + + + + + +E+ Sbjct: 55 LLNEIKDAEELQKSKDAEMKEIAFAEYNNLIEKRNQMENEIKVLLIPTDPNEDKNIIVEI 114 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG GG E+ + L MYTR+AE+ +K E L + G K I G + Sbjct: 115 RAGTGGNEAALFVGDLYGMYTRFAERNGWKYEVLGSNPTGLGGYKEVVFEINGGKVWRCF 174 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E+G HR+ R+ +++ R HTS +++ V P + +++EI D RIDTYRASGAGGQ Sbjct: 175 KFERGAHRVQRVPETEASGRVHTSAATVAVLP-EAEEVDVEIKMEDLRIDTYRASGAGGQ 233 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+N TDSA+RITH+PTG+VV CQ ERSQ KN+A+A+ +LRAK+Y E + E + Sbjct: 234 HINKTDSAIRITHLPTGLVVACQDERSQIKNRAKAFKVLRAKIY--EQRILEHEMRLSSE 291 Query: 302 SKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K +IG G +IR+Y P + D R + ++V+DG+L + + + Sbjct: 292 RKQQIGSGDRSEKIRTYNF-PQNRITDHRIGYSVYNITEVMDGNLSELVNKLIKAD 346 >gi|149371331|ref|ZP_01890817.1| peptide chain release factor RF-2 [unidentified eubacterium SCB49] gi|149355469|gb|EDM44028.1| peptide chain release factor RF-2 [unidentified eubacterium SCB49] Length = 317 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 139/308 (45%), Positives = 202/308 (65%), Gaps = 2/308 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ + ++ +E D ++ E E + + E +E +F Sbjct: 1 MKVLRSKKKWVTDYEEATTLFEDAEVIYEFFKEGEAPAENVEERYKKAF--EAIEALEFR 58 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++LS E D+ A L++ AGAGGTES DWANML+RMY WAE+ FK + L G+ AGI Sbjct: 59 NMLSEEGDAMSAVLQITAGAGGTESCDWANMLMRMYLMWAERNGFKVKELNYQAGDVAGI 118 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ TL I G A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+ DD+IEI+I+ Sbjct: 119 KTVTLEIDGEYAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDTIEIDINP 178 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +D D R+ GAGGQ+VN ++ +TH P+G+V+ + RSQ +N+ +A ML+++LY Sbjct: 179 ADIGWDFARSGGAGGQNVNKVETKAILTHKPSGIVIHNSETRSQLENRQKAMQMLKSQLY 238 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+K++ E +K I WG QIR+YVLQPY++VKD+R N E T+P +LDG +D+ Sbjct: 239 EIELRKQQAQRAEIEGNKMAIEWGSQIRNYVLQPYKLVKDVRNNHESTNPDAILDGHIDE 298 Query: 346 FMKATLAI 353 F+KA L + Sbjct: 299 FLKAYLMM 306 >gi|309803264|ref|ZP_07697361.1| peptide chain release factor 1 [Lactobacillus iners LactinV 11V1-d] gi|309805669|ref|ZP_07699710.1| peptide chain release factor 1 [Lactobacillus iners LactinV 09V1-c] gi|309806347|ref|ZP_07700360.1| peptide chain release factor 1 [Lactobacillus iners LactinV 03V1-b] gi|309809934|ref|ZP_07703782.1| peptide chain release factor 1 [Lactobacillus iners SPIN 2503V10-D] gi|312871919|ref|ZP_07732001.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2062A-h1] gi|312873839|ref|ZP_07733882.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2052A-d] gi|329921112|ref|ZP_08277635.1| peptide chain release factor 1 [Lactobacillus iners SPIN 1401G] gi|308164772|gb|EFO67022.1| peptide chain release factor 1 [Lactobacillus iners LactinV 11V1-d] gi|308165029|gb|EFO67271.1| peptide chain release factor 1 [Lactobacillus iners LactinV 09V1-c] gi|308167331|gb|EFO69497.1| peptide chain release factor 1 [Lactobacillus iners LactinV 03V1-b] gi|308169722|gb|EFO71767.1| peptide chain release factor 1 [Lactobacillus iners SPIN 2503V10-D] gi|311090621|gb|EFQ49022.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2052A-d] gi|311092496|gb|EFQ50858.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2062A-h1] gi|328935019|gb|EGG31508.1| peptide chain release factor 1 [Lactobacillus iners SPIN 1401G] Length = 362 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 95/342 (27%), Positives = 167/342 (48%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ + L DP + + + + +E L + K + + E+ Sbjct: 8 LESLLAHYEELQEMMSDPEVINDTKKYMEISKEEADLREVVEKYKLFCNDQSEIANNKEI 67 Query: 76 ALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D ++ + + + E + L D D +E+ AGG E+ Sbjct: 68 ISHESDSDLIDMAKEENIALEEEVNKLEEEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY ++AE + ++ ++ + E G K ++I G Y LK E G HR+ Sbjct: 128 LFAGDLLRMYQKYAENQGWQMSIIDAEETEVGGFKRVAVMISGDKVYSKLKYENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ V P + +++++ D R+D YR+SGAGGQH+N T SAVR Sbjct: 188 RIPVTESQGRVHTSTATVAVMP-EYEQVDLDLDPKDIRVDVYRSSGAGGQHINKTSSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q +RSQ +N+ +A +L++++Y+ + + A+ K +G G Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDFYESQNQ--ASYDAKRKESVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R + +++G+L+D + A Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELEDIISAL 345 >gi|259501685|ref|ZP_05744587.1| peptide chain release factor RF1 [Lactobacillus iners DSM 13335] gi|302191107|ref|ZP_07267361.1| peptide chain release factor 1 [Lactobacillus iners AB-1] gi|309808088|ref|ZP_07702006.1| peptide chain release factor 1 [Lactobacillus iners LactinV 01V1-a] gi|312874655|ref|ZP_07734679.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2053A-b] gi|315653748|ref|ZP_07906668.1| peptide chain release factor RF1 [Lactobacillus iners ATCC 55195] gi|325913047|ref|ZP_08175420.1| peptide chain release factor 1 [Lactobacillus iners UPII 60-B] gi|259166970|gb|EEW51465.1| peptide chain release factor RF1 [Lactobacillus iners DSM 13335] gi|308168690|gb|EFO70790.1| peptide chain release factor 1 [Lactobacillus iners LactinV 01V1-a] gi|311089885|gb|EFQ48305.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2053A-b] gi|315489110|gb|EFU78752.1| peptide chain release factor RF1 [Lactobacillus iners ATCC 55195] gi|325477727|gb|EGC80866.1| peptide chain release factor 1 [Lactobacillus iners UPII 60-B] Length = 362 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 95/342 (27%), Positives = 167/342 (48%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ + L DP + + + + +E L + K + + E+ Sbjct: 8 LESLLAHYEELQEMMSDPEVINDTKKYMEISKEEADLREVVEKYKLFCNDQSEIANNKEI 67 Query: 76 ALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D ++ + + + E + L D D +E+ AGG E+ Sbjct: 68 ISHESDSDLIDMAKEENIALEEEVTKLEEEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY ++AE + ++ ++ + E G K ++I G Y LK E G HR+ Sbjct: 128 LFAGDLLRMYQKYAENQGWQMSIIDAEETEVGGFKRVAVMISGDKVYSKLKYENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ V P + +++++ D R+D YR+SGAGGQH+N T SAVR Sbjct: 188 RIPVTESQGRVHTSTATVAVMP-EYEQVDLDLDPKDIRVDVYRSSGAGGQHINKTSSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q +RSQ +N+ +A +L++++Y+ + + A+ K +G G Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDFYESQNQ--ASYDAKRKESVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R + +++G+L+D + A Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELEDIISAL 345 >gi|221134749|ref|ZP_03561052.1| Protein chain release factor B, RF-2 [Glaciecola sp. HTCC2999] Length = 248 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 150/246 (60%), Positives = 190/246 (77%), Gaps = 1/246 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + + D ND YL++ +G+GGTE+QDWANMLLRMY RW E+ FKTE +E+ DG+ AGIK Sbjct: 1 MFAKPNDGNDCYLDIQSGSGGTEAQDWANMLLRMYLRWGEENGFKTELIEVSDGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ G A+GWL+ E GVHRLVR SP+DS +RRHTSF+S ++YP ++D I+I+I+ S Sbjct: 61 SATIRFGGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASAFIYPEINDDIDIDINPS 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYRASGAGGQHVN TDSAVRITH+PT +VVQCQ +RSQHKNK QA+ L+AKLYE Sbjct: 121 DLRIDTYRASGAGGQHVNRTDSAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLKAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ELQK+ E E SK++IGWG QIRSYVL +KDLRT +E + VLDG+L+ F Sbjct: 181 YELQKQNEEKQAMEDSKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGNLNKF 239 Query: 347 MKATLA 352 ++A+L Sbjct: 240 IEASLK 245 >gi|240949505|ref|ZP_04753845.1| peptide chain release factor 2 [Actinobacillus minor NM305] gi|240296078|gb|EER46739.1| peptide chain release factor 2 [Actinobacillus minor NM305] Length = 248 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 146/247 (59%), Positives = 189/247 (76%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ D+ D Y+++ AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+K Sbjct: 1 MFSGQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ + G A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP VD+ I IE++ + Sbjct: 61 SATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEVDEDINIEVNPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVN T+SAVRITHIP+G+VVQCQ RSQH+NK QA L+AKLYE Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNGRSQHQNKDQAMKQLKAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 +E+ K+ E SK++IGWG QIRSYVL +KDLRT +E + VLDGDLD F Sbjct: 181 MEMMKQNAEKQAMEESKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKF 239 Query: 347 MKATLAI 353 ++A+L Sbjct: 240 IEASLKA 246 >gi|297520245|ref|ZP_06938631.1| peptide chain release factor 2 [Escherichia coli OP50] Length = 248 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 156/247 (63%), Positives = 187/247 (75%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SGE DS D YL++ AG+GGTE+QDWA+ML RMY RWAE R FKTE +E +GE AGIK Sbjct: 1 MFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 S T+ I G AYGWL+ E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+IEI+ + Sbjct: 61 SVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYE Sbjct: 121 DLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 LE+QK+ E +K++IGWG QIRSYVL +KDLRT +E + VLDG LD F Sbjct: 181 LEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQF 239 Query: 347 MKATLAI 353 ++A+L Sbjct: 240 IEASLKA 246 >gi|212550858|ref|YP_002309175.1| peptide chain release factor 1 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212549096|dbj|BAG83764.1| peptide chain release factor 1 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 359 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 103/346 (29%), Positives = 172/346 (49%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + R + +P ++ L +E + L+ + + L + + + Sbjct: 8 LDILIIRFEEIGKLISNPDSITDMKRFVKLNKEYRELEKISLIRDQYKQTLINIIDAQTI 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 +E D + + + L+ + + + D +A +E+ +G GG E+ Sbjct: 68 LEKESDKILREIAKEELEESTSLLNQLEKKIKLLLIPIDPQDGKNAIVEIRSGTGGDEAS 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L +MY+++ E + +K +G G K + G N Y LK E GVHR+ Sbjct: 128 LFAGDLYKMYSKYCESKGWKIAVTSSSEGTIGGFKEIIFTVNGENVYSTLKYESGVHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V+P ++IEI ESD R DT+ +SG GGQ VNTT SA+R Sbjct: 188 RVPITETQGRIHTSAATVAVFP-EAKDVDIEIKESDIRTDTFCSSGPGGQSVNTTYSAIR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +THIPTG+VVQCQ ERSQ KNK +A LR+++Y +E QK+ + + KT + G + Sbjct: 247 LTHIPTGIVVQCQDERSQLKNKEKAMTELRSRIYNIEYQKQIDETAL--KRKTMVSTGDR 304 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P V D R N + L+G++ +F+ + + Sbjct: 305 SAKIRTYNY-PQGRVTDHRINYTTYNLLTFLEGNIQEFINQLIIAE 349 >gi|126697059|ref|YP_001091945.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT 9301] gi|166223586|sp|A3PF19|RF1_PROM0 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|126544102|gb|ABO18344.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT 9301] Length = 364 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 100/348 (28%), Positives = 168/348 (48%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 A + L + DP + + + + + RER L+ + ++ D + L Sbjct: 10 LKTASESFENLEVQLADPDIANDPKKLESIARERSKLEPLVLDFNKLLDTDKEIEDSKNL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130 E + ++ + E + + + D LE+ AGAGG E+ Sbjct: 70 LKENRNDKEMESLINEELITLEESKSELIQKTTIALLPKDPRDERSVMLEIRAGAGGNEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY R+ +K + + + + + G K + +KG + Y LK E GVHR+ Sbjct: 130 CIWAGDLARMYERYGQKIGWSVKPVSASESDMGGFKELVISVKGDSVYSQLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P D +E++I +D + T R+ GAGGQ+VN ++A+ Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADPVEVKIDPTDLEVGTARSGGAGGQNVNKVETAI 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ V C QERSQ +N+ +A +LRAKLYE++L+ E A +++G G Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLK--EANAKERSQRLSQVGTGD 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + D R S +L G LD+ + A +A ++ Sbjct: 307 RSEKIRTYNFKD-NRTTDHRLG-SNFSLEPILAGQLDEVINACIAQEQ 352 >gi|119358446|ref|YP_913090.1| peptide chain release factor 1 [Chlorobium phaeobacteroides DSM 266] gi|166223545|sp|A1BJT9|RF1_CHLPD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119355795|gb|ABL66666.1| bacterial peptide chain release factor 1 (bRF-1) [Chlorobium phaeobacteroides DSM 266] Length = 357 Score = 210 bits (534), Expect = 3e-52, Method: Composition-based stats. Identities = 106/352 (30%), Positives = 180/352 (51%), Gaps = 13/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD ++ L + DPH ++ + L +E + L + + Sbjct: 1 MFDKLQAIKEKHEDLEQQLLDPHAAEDQNRFRKLNKEYRDLCSIVEAYDRYALAKKQLEE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAGG 127 L E + + D + ++ + ++ + L E DS + +E+ AG GG Sbjct: 61 SRLLLKNEKEQDMRAMVQDEISSLQESILEREKQLKLLLLPKDEVDSRNVIIEIRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNAYGWLKGEQG 186 E+ +A L+RMY R+AE++ +K E L+ ++ G + L + G + YG +K E G Sbjct: 121 EEAALFAADLVRMYQRFAEQQGWKYEVLDFNESSVPGGFREIVLGVSGHDVYGTMKYESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ ++ R HTS +S+ V P + +++EI + D R DTYR+ G GGQ+VN Sbjct: 181 VHRVQRVPDTETQGRIHTSAASVAVLP-EAEEVDVEIRKDDLRFDTYRSGGKGGQNVNKV 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 ++AVRITH P+G+VV CQ+ERSQ +NK +A MLRAKLY+ +L +++E ++ + Sbjct: 240 ETAVRITHQPSGIVVACQEERSQLQNKERAMKMLRAKLYDRQLAEQQEKRAGL--RRSMV 297 Query: 307 GWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G + IR+Y P V D R + ++ GD+ D ++A + Sbjct: 298 TTGDRSAKIRTYNY-PQSRVTDHRIGFTSHALPQIMQGDIKDIIEALKMHDQ 348 >gi|239787352|emb|CAX83829.1| Peptide chain release factor RF-1 [uncultured bacterium] Length = 354 Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 115/345 (33%), Positives = 176/345 (51%), Gaps = 11/345 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R L + E + + L +E L+N I + L + Sbjct: 7 LDQIIERYLDLQKQLEQE--VCDPKKFAGLSKEYAGLENIYQTILNYKSLLQQKADAEIM 64 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + +E + + + L D A LE+ AG GG E+ +A Sbjct: 65 LTDPGMRQLAEEELGALKLATEETWQMLRVLLLPKDVDDERSAILEIRAGTGGDEAGLFA 124 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L+RMY R+A ++ + L + + +K A + I G + LK E GVHR+ R+ Sbjct: 125 ADLMRMYQRYAAIHGWQFDVLGLSETGLGSVKEAQVGIVGKGVFAKLKFESGVHRVQRVP 184 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S+ R HTS +++ V P + ++IEI + D RID RASGAGGQHVNTTDSAVR+TH Sbjct: 185 ETESSGRVHTSAATVAVLP-EVEDVDIEIKDEDLRIDICRASGAGGQHVNTTDSAVRLTH 243 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV Q ERSQHKNKA+A ++RA+LY+L +KRE+ K+++G G + Sbjct: 244 LPTGLVVAQQDERSQHKNKAKAMKIMRARLYDL--RKREQDEVRAADRKSQVGSGDRSER 301 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 IR+Y P V D R N+ V+ G+ LD+ + +A + Sbjct: 302 IRTYNF-PQGRVTDHRINLTLYKLDQVMQGEALDELIDNLIADDQ 345 >gi|325911742|ref|ZP_08174149.1| peptide chain release factor 1 [Lactobacillus iners UPII 143-D] gi|325476508|gb|EGC79667.1| peptide chain release factor 1 [Lactobacillus iners UPII 143-D] Length = 362 Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 95/342 (27%), Positives = 167/342 (48%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ + L DP + + + + +E L + K + + E+ Sbjct: 8 LESLLAHYEELQEMMSDPEVINDTKKYMEISKEEADLREVVEKYKLFCNDQSEIANNKEI 67 Query: 76 ALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D ++ + + + E + L D D +E+ AGG E+ Sbjct: 68 ISHESDSDLIDMAKEENIALEEEVTKLEEEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY ++AE + ++ ++ + E G K ++I G Y LK E G HR+ Sbjct: 128 LFAGDLLRMYQKYAENQGWQMSIIDSEETEVGGFKRVAVMITGDKVYSKLKYENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ V P + +++++ D R+D YR+SGAGGQH+N T SAVR Sbjct: 188 RIPVTESQGRVHTSTATVAVMP-EYEQVDLDLDPKDIRVDVYRSSGAGGQHINKTSSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q +RSQ +N+ +A +L++++Y+ + + A+ K +G G Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDFYESQNQ--ASYDAKRKESVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R + +++G+L+D + A Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELEDIISAL 345 >gi|312871649|ref|ZP_07731741.1| peptide chain release factor 1 [Lactobacillus iners LEAF 3008A-a] gi|311092874|gb|EFQ51226.1| peptide chain release factor 1 [Lactobacillus iners LEAF 3008A-a] Length = 362 Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 95/342 (27%), Positives = 167/342 (48%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ + L DP + + + + +E L + K + + E+ Sbjct: 8 LESLLAHYEELQEMMSDPEVINDTKKYMEISKEEADLREVVEKYKLFCNDQSEIANNKEI 67 Query: 76 ALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D ++ + + + E + L D D +E+ AGG E+ Sbjct: 68 ISHESDSDLIDMAKEENIALEEEVNKLEEEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY ++AE + ++ ++ + E G K ++I G Y LK E G HR+ Sbjct: 128 LFAGDLLRMYQKYAENQGWQMSIIDSEETEVGGFKRVAVMITGDKVYSKLKYENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ V P + +++++ D R+D YR+SGAGGQH+N T SAVR Sbjct: 188 RIPVTESQGRVHTSTATVAVMP-EYEQVDLDLDPKDIRVDVYRSSGAGGQHINKTSSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q +RSQ +N+ +A +L++++Y+ + + A+ K +G G Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDFYESQNQ--ASYDAKRKESVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R + +++G+L+D + A Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELEDIISAL 345 >gi|114704325|ref|ZP_01437233.1| peptide chain release factor 1 [Fulvimarina pelagi HTCC2506] gi|114539110|gb|EAU42230.1| peptide chain release factor 1 [Fulvimarina pelagi HTCC2506] Length = 359 Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 120/348 (34%), Positives = 180/348 (51%), Gaps = 16/348 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + R + L + L E L+ ++ I+E + + L Sbjct: 9 LDEILARFTRLEMDMAKG---PDHEVYSKLAAEYASLEEVVAAIREFRALETELADAESL 65 Query: 76 ALEEDDCSILQE-----TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + ++ D R + Q L AD A LE+ AG GG+E+ Sbjct: 66 LDDPESDREMRNLAGVEVDDLRSRREGLRGRIQILLLPKDSADEKGAILEIRAGTGGSEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+AE ++K E L +GE G K IKG + LK E GVHR+ Sbjct: 126 GLFAGDLYRMYQRYAELNRWKVELLSASEGEVGGFKEVIAAIKGNGVFSRLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + I+I++ D RIDT RASGAGGQHVNTTDSAV Sbjct: 186 QRVPETESGGRIHTSAATVAVLP-EAEDIDIDVRNEDIRIDTMRASGAGGQHVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+VV E+SQH+N+AQA +L+AKLY++E QK ++ + K+++G G Sbjct: 245 RITHLPTGIVVTSS-EKSQHQNRAQAMQVLKAKLYDMERQKYDDERSAA--RKSQVGSGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V++G++++ + A +A + Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDKVIEGEMEELVDALVADHQ 348 >gi|306829484|ref|ZP_07462674.1| peptide chain release factor RF1 [Streptococcus mitis ATCC 6249] gi|307708639|ref|ZP_07645102.1| peptide chain release factor 1 [Streptococcus mitis NCTC 12261] gi|315613125|ref|ZP_07888035.1| peptide chain release factor RF1 [Streptococcus sanguinis ATCC 49296] gi|322376710|ref|ZP_08051203.1| peptide chain release factor 1 [Streptococcus sp. M334] gi|304428570|gb|EFM31660.1| peptide chain release factor RF1 [Streptococcus mitis ATCC 6249] gi|307615213|gb|EFN94423.1| peptide chain release factor 1 [Streptococcus mitis NCTC 12261] gi|315314687|gb|EFU62729.1| peptide chain release factor RF1 [Streptococcus sanguinis ATCC 49296] gi|321282517|gb|EFX59524.1| peptide chain release factor 1 [Streptococcus sp. M334] Length = 359 Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 98/348 (28%), Positives = 161/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + L + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E G K ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350 >gi|227873770|ref|ZP_03991999.1| peptide chain release factor RF1 [Oribacterium sinus F0268] gi|227840386|gb|EEJ50787.1| peptide chain release factor RF1 [Oribacterium sinus F0268] Length = 358 Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 114/351 (32%), Positives = 185/351 (52%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + + + P + ++ + K L+ E+ L+ + Sbjct: 1 MFENLEEVKKHYEEIMHNLTIPEVVSDISQYKKLILEQTSLEPIYKAYLAFRKAEQSEEE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGG 127 L L E D IL+ + LQ+ K + E Q L E D + +E+ GAGG Sbjct: 61 ALSLLDNEKDKEILEMAKEELQQAKEDQERLTKEIQLLLLPKDENDDKNIVMEIRGGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYT +AEKR +KTE + ++ G+K ++ G AY LK E GV Sbjct: 121 EEAALFAGSLYRMYTSYAEKRGWKTELVSFNETGLGGLKEVVFIVDGHGAYSRLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS +++ V P + +++EI+ +D R++ +R+SGAGGQH+N T Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVMP-EVEDVQVEINPADVRMEVFRSSGAGGQHINKTS 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+ H PTG+V +CQ+ERSQ +N+ +A +LRA+LYE+EL+K++ ++++G Sbjct: 240 SAVRLIHEPTGLVAECQEERSQVQNREKAMRLLRARLYEIELEKQQSEN--AAEKRSQLG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P V D R + + VL GDLD + + + Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLYNIDAVLSGDLDLLIDPLITEDQ 347 >gi|227548000|ref|ZP_03978049.1| peptide chain release factor 1 [Corynebacterium lipophiloflavum DSM 44291] gi|227079906|gb|EEI17869.1| peptide chain release factor 1 [Corynebacterium lipophiloflavum DSM 44291] Length = 357 Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 110/346 (31%), Positives = 178/346 (51%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ V + + DP + + + + L + L I+ E+ + + E+ Sbjct: 8 VDDYVSEYEGIQAQMGDPDVAGDAEQFRKLSKRYAELQPIINVYNELSEARENYEAAKEM 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A E+ + + + E E D +D +E+ AGAGG E+ +A Sbjct: 68 ASEDKEFAEEAVRLEGDIARLEEELADLL--APRDEHDGDDIIMEIKAGAGGEEAALFAG 125 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190 L RMY ++ EK E L++ + + G K T+ +K A+ LK E GVHR+ Sbjct: 126 DLARMYQKYCEKNGLSWEVLDLAESDLGGAKDMTVAVKSKTPSRDGAWSKLKFEGGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R TS + ++V+P ++ ++I E D RID YR+SG GGQ VNTTDSAV Sbjct: 186 QRVPVTESQGRIQTSAAGVYVFPEAEEVASVDIDEKDLRIDVYRSSGKGGQGVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PT +VV CQ ERSQ +N+A+A +L+A+L +LE +K + A G +S+ + Sbjct: 246 RITHLPTNIVVTCQNERSQIQNRARAMQVLQARLDQLEREKADAEAAEGRASQVRTMDRS 305 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N + + VLDG++D+ + A ++ Sbjct: 306 ERIRTYNW-PENRISDHRINYKANNLDSVLDGNMDELISALQKHER 350 >gi|320354565|ref|YP_004195904.1| peptide chain release factor 1 (bRF-1) [Desulfobulbus propionicus DSM 2032] gi|320123067|gb|ADW18613.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfobulbus propionicus DSM 2032] Length = 356 Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 110/344 (31%), Positives = 176/344 (51%), Gaps = 13/344 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCD 68 +FD + ++L L + DP L + + ++RE ++ + ++ Sbjct: 1 MFDNLRDIDEKLGVLERQLADPQLVSDQQRYREIVREHANVAKIAELYAAYTNVRAQIAG 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYK--QFESLLSGEADSNDAYLEVHAGAG 126 N L+ ++ D L + +K + + L D + +LE+ AG G Sbjct: 61 NQELIRTEQDDPDLVELAKAEIEELVVKQTELEQAIRIRLLPKDPNDDKNIFLEIRAGTG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ + L RMY+R+AE + +K E + + G K L+ G Y LK E G Sbjct: 121 GDEAALFVADLFRMYSRYAEMQGWKVEVMSSNPIGIGGFKELIALVSGTQVYSRLKYESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ ++ R HTS ++ + P + +++ I ++ + D YR+SG GGQ VNTT Sbjct: 181 VHRVQRVPDTETQGRIHTSAVTVAIIP-EAEEVDLHIEPNELKFDVYRSSGPGGQSVNTT 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVR+TH+PTG+VV CQ E+SQHKNKA+A +LRA+L + Q+R + I E K+++ Sbjct: 240 DSAVRVTHLPTGLVVTCQDEKSQHKNKAKALQVLRARLLDKMEQERHD--RISEERKSQV 297 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 G G +IR+Y P V D R N+ V+ G LDD + Sbjct: 298 GSGDRSERIRTYNF-PQGRVTDHRINLTLYRLDQVMAGMLDDII 340 >gi|315222986|ref|ZP_07864865.1| peptide chain release factor 1 [Streptococcus anginosus F0211] gi|315187936|gb|EFU21672.1| peptide chain release factor 1 [Streptococcus anginosus F0211] Length = 359 Score = 210 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 99/348 (28%), Positives = 160/348 (45%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + L + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVATYREYKRVLQNITDAEEM 66 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + +K E +E G K ++ G + Y LK E G HR+ Sbjct: 127 SLFAGDLLTMYQKYAESQGWKFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D RID Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEIVDALVLYDQ 350 >gi|78778239|ref|YP_394554.1| peptide chain release factor 1 [Sulfurimonas denitrificans DSM 1251] gi|119361635|sp|Q30NW2|RF1_SULDN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|78498779|gb|ABB45319.1| bacterial peptide chain release factor 1 (bRF-1) [Sulfurimonas denitrificans DSM 1251] Length = 355 Score = 210 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 109/341 (31%), Positives = 176/341 (51%), Gaps = 9/341 (2%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 + R + L P + ++ L +ER L+ + +E + + E+ + Sbjct: 10 INRYNELGEMLSSPDITSDIKRMTTLSKERSSLEKIVEKAQEYKSVISQINDTKEMLYDA 69 Query: 80 DDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 + + +E L+ + + L D + +E+ AGAGG E+ + L Sbjct: 70 EMAEMAKEELKELEIQIPILENDIKLLLLPKDPNDDRNIIVELRAGAGGDEAAIFVGNLF 129 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 YTR+A+ + +K E L + G K LI+G Y LK E G HR+ R+ +S Sbjct: 130 EAYTRYADLKDWKVEILSSSPSDAGGYKEIIALIRGEQVYSRLKYEGGTHRVQRVPATES 189 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R HTS ++ V P D +EI+I+E+D +ID R+SG GGQ VNTTDSAVRITH+PTG Sbjct: 190 QGRVHTSAITVAVMP-EVDDVEIQINENDLKIDVMRSSGCGGQSVNTTDSAVRITHLPTG 248 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSY 315 +VV Q ++SQHKNK +A +L+A+LY+LE+Q E IA + ++G G +IR+Y Sbjct: 249 LVVTNQDQKSQHKNKEKAMKVLKARLYDLEMQ--EAIAKDSANRSAQVGTGDRSGRIRTY 306 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLAIKK 355 P + D R + ++++ G L D+ ++ +A + Sbjct: 307 NY-PQNRMSDHRITLTLYRLAEIMQGGLMDEIIEPLIADHQ 346 >gi|309800291|ref|ZP_07694464.1| peptide chain release factor 1 [Streptococcus infantis SK1302] gi|308116075|gb|EFO53578.1| peptide chain release factor 1 [Streptococcus infantis SK1302] Length = 359 Score = 210 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 98/348 (28%), Positives = 161/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + L + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIIDAEEM 66 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E G K ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350 >gi|323356873|ref|YP_004223269.1| protein chain release factor A [Microbacterium testaceum StLB037] gi|323273244|dbj|BAJ73389.1| protein chain release factor A [Microbacterium testaceum StLB037] Length = 368 Score = 210 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 105/353 (29%), Positives = 170/353 (48%), Gaps = 15/353 (4%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 G+F+ + + + DP + + AK + R L+ + + D Sbjct: 10 GIFESVRGLIDEHREIELELNDPAVHADAARAKRVNRRYAELNRIVHAYQAWVSASDDLE 69 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 ELA E++ + + E + + D+ D +E+ G GG ES Sbjct: 70 AARELAREDEAFAAEIPALEERVS--ETQERLRRLLIPRDPDDARDVIMEIKGGEGGAES 127 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI------KGPNAYGWLKGE 184 +A LLRMY ++A +KTE LE + + G K + I + LK E Sbjct: 128 ALFAADLLRMYLQYAASMGWKTELLERTESDLGGYKDVQVAIKGSSSDPAQGVWAHLKYE 187 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ +S R HTS + + V+P VD+ E+ I +D +ID +R+SG GGQ VN Sbjct: 188 GGVHRVQRVPATESQGRIHTSTTGVLVFPEVDEPEEVAIDPNDLKIDVFRSSGPGGQSVN 247 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVRITH+PTG+VV Q E+SQ +N+ +LRA+L + ++R+ +A ++ Sbjct: 248 TTDSAVRITHVPTGIVVSMQNEKSQLQNREAGMRVLRARLLAKQQEERDAVAADA--RRS 305 Query: 305 EI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +I +IR+Y P + D RT + + V+DG L +++ + Sbjct: 306 QIRGMDRSERIRTYNF-PENRIADHRTGYKAYNLDQVMDGALGPIIESAITAD 357 >gi|307709438|ref|ZP_07645895.1| peptide chain release factor 1 [Streptococcus mitis SK564] gi|307619752|gb|EFN98871.1| peptide chain release factor 1 [Streptococcus mitis SK564] Length = 359 Score = 210 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 98/348 (28%), Positives = 161/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + L + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKESGGDADLEEMAKQELKDAKVEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E G K ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASINGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350 >gi|317052432|ref|YP_004113548.1| peptide chain release factor 1 [Desulfurispirillum indicum S5] gi|316947516|gb|ADU66992.1| peptide chain release factor 1 [Desulfurispirillum indicum S5] Length = 355 Score = 210 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 116/347 (33%), Positives = 186/347 (53%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72 + R L+ + P + + RE L + ++ + L DN + Sbjct: 5 LQDIEDRYELLSAELSHPGATADTQRLQQATRELSELREVVEAFQQFKTVRRELADNQEM 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQ 131 L + + ++Q+ +L+ + ++E E L D+ + LE+ AG GG E+ Sbjct: 65 LTSEKDRELREMIQQEIQSLRHQEQQLEDTLTELLLPRDPNDTKNIILEIRAGTGGEEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+A++R +K E L +++ G + +I+G N Y LK E G HR+ Sbjct: 125 LFATDLFRMYSRYADERGWKVEVLSVNETGNGGFREIISMIEGRNVYSRLKFESGTHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S+ R HTS ++ V P + ++I+I+ +D RID YR+SGAGGQHVNTTDSAVR Sbjct: 185 RVPQTESSGRIHTSAVTVAVLP-EAEEVDIDINPADLRIDVYRSSGAGGQHVNTTDSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTGV V CQ+ RSQHKNK +A ++LR++L + +Q+ + + K ++G G Sbjct: 244 VTHIPTGVSVACQEGRSQHKNKEKALSILRSRLLDHAVQQ--SDSQRSQDRKLQVGSGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ VL+GDLD+ + + Sbjct: 302 SERIRTYNF-PQGRVTDHRVNLTLHRLEQVLEGDLDEVIDTLTKSAR 347 >gi|332558342|ref|ZP_08412664.1| peptide chain release factor 1 [Rhodobacter sphaeroides WS8N] gi|332276054|gb|EGJ21369.1| peptide chain release factor 1 [Rhodobacter sphaeroides WS8N] Length = 351 Score = 210 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 116/342 (33%), Positives = 180/342 (52%), Gaps = 12/342 (3%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 V+R FL + E L RE L ++ I + L D + Sbjct: 9 QIVRRFEFLEARLSAGAA---PAEIAALSREYAELKPVVAEISAYRTALEDLAEAEAMLS 65 Query: 78 EEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 + + ++ ++ L+ + + L AD+ A LE+ G GG E+ +A Sbjct: 66 DPEMRALAEDEIPALRARIPGMEQALRLALLPKDAADARPAILEIRPGTGGEEAALFAGD 125 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 LLRMY R+AE + ++ E L++ E GI+ AT I+G A+ LK E GVHR+ R+ Sbjct: 126 LLRMYQRYAEGQGWRFELLDLAPSELGGIREATARIEGEGAFARLKYESGVHRVQRVPET 185 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 ++ R HTS +++ V P + +++EI +D RIDT R+SGAGGQHVNTTDSAVRITH+P Sbjct: 186 EAQGRIHTSAATVAVLP-EAEEVDLEIPAADIRIDTMRSSGAGGQHVNTTDSAVRITHLP 244 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG++V E+SQH+N+ A +LRA+LY+LE Q+ + K ++G G +IR Sbjct: 245 TGIIVTSS-EKSQHRNREIAMQVLRARLYDLERQRLADAR--SADRKAQVGSGDRSERIR 301 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +Y P + D R N+ + ++ GDL + + A A + Sbjct: 302 TYNF-PQGRMTDHRINLTLYALPQIMAGDLSEVISALTAHDQ 342 >gi|222109995|ref|YP_002552259.1| peptide chain release factor 1 [Acidovorax ebreus TPSY] gi|254790879|sp|B9ME05|RF1_DIAST RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|221729439|gb|ACM32259.1| peptide chain release factor 1 [Acidovorax ebreus TPSY] Length = 367 Score = 210 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 112/352 (31%), Positives = 174/352 (49%), Gaps = 17/352 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + QRL L+ + ++ + + + RE + Q R D E+ Sbjct: 9 LERYAQRLQELDFLLSREDIMADMQQYRSISREHAEVTQVAGRYARYQQREADLAGAREM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGTESQDW 133 + D + + + + +L + + L D +A++E+ AG GG ES + Sbjct: 69 LEDPD-MAEMAQEEIHAAETELVQLEDELQRLLLPKDPDDERNAFIEIRAGTGGDESALF 127 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN--------AYGWLKGEQ 185 A L RMYTR+A +K E + ++ E G K L I+G YG LK E Sbjct: 128 AGDLARMYTRYAATVGWKVEVMSANESEIGGYKEVVLRIEGQPGTGPSGSGVYGALKFES 187 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G HR+ R+ ++ R HTS ++ V P D+ I ++ +D RIDT+RASGAGGQH+N Sbjct: 188 GGHRVQRVPATETQGRIHTSACTVAVMPEPDEHQAITLNPADLRIDTFRASGAGGQHINK 247 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVR+ H+PTG+V +CQ RSQH NKA+A +L+A++ E E +R A K Sbjct: 248 TDSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSER--AAKEAALRKGL 305 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IG G +IR+Y P + D R N+ +++GDL + ++A + Sbjct: 306 IGSGDRSDRIRTYNF-PQGRLTDHRINLTLYKLLAIMEGDLGEVLQALQHAR 356 >gi|295836498|ref|ZP_06823431.1| peptide chain release factor 1 [Streptomyces sp. SPB74] gi|197699008|gb|EDY45941.1| peptide chain release factor 1 [Streptomyces sp. SPB74] Length = 357 Score = 210 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 114/349 (32%), Positives = 176/349 (50%), Gaps = 15/349 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + + + L DP + + A+ L + L + + + D Sbjct: 1 MFEAVEELIGEHAELERTLADPSVHADQANARRLSKRYAELTPIVGTYRAWRATGDDIAT 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ELA E+ + + + D + + E + + +D D LE+ AGAGG ES Sbjct: 61 ARELAAEDPEFAAEIKQLDERR--EELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN---------AYGWLK 182 +A LLRMY R+AE+ +KTE L+ + E G K + +K + +K Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEILDATESELGGYKDVQVAVKTKGNANPEPGQGVWARMK 178 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHR+ R+ +S R HTS + + V P + +++EI+ +D RID YR+SG GGQ Sbjct: 179 YEGGVHRVQRVPSTESQGRIHTSAAGVLVTP-EAEEVDVEINPNDLRIDVYRSSGPGGQS 237 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTGVV CQ E+SQ +NK QA +LR++L ++ E A S Sbjct: 238 VNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREAADARRS 297 Query: 303 KTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 + + +IR+Y P + D R + + VLDG+LD ++A Sbjct: 298 QVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGELDAVIQAC 345 >gi|157165147|ref|YP_001465968.1| peptide chain release factor 1 [Campylobacter concisus 13826] gi|166223539|sp|A7ZB10|RF1_CAMC1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|112801757|gb|EAT99101.1| peptide chain release factor 1 [Campylobacter concisus 13826] Length = 355 Score = 210 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 110/340 (32%), Positives = 172/340 (50%), Gaps = 9/340 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 R ++T DP++ ++ + L +E+ ++ + + L D L + + Sbjct: 11 DRYDEISTLLSDPNIANDIEKMTKLSKEQSSIEPVATAATKYLQILNDIEENKALLEDAE 70 Query: 81 DCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139 +E + E + L D + +LE+ AG GG E+ +A L Sbjct: 71 LGELAKEELKSLEISREKLEEEIKILLLPKDPNDDKNIFLEIRAGTGGDEAALFAGDLFN 130 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 Y R+AE R +K E + +G G K +LIKG AY LK E G HR+ R+ +S Sbjct: 131 AYIRYAELRGYKFEIVSQSEGNTGGFKEIIVLIKGKGAYSRLKFEGGTHRVQRVPETESQ 190 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS ++ + P V+DS I+ +D R+D R+SG GGQ VNTTDSAVRITHIPTG+ Sbjct: 191 GRVHTSAVTVAIMPEVEDSEIE-INPNDIRVDVMRSSGHGGQSVNTTDSAVRITHIPTGL 249 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYV 316 VV Q +SQHKNK A +L+A+LY E+Q++E +A K+++G G +IR+Y Sbjct: 250 VVTNQDGKSQHKNKEAAMKVLKARLY--EMQEQERLAKETSERKSQVGTGDRSGRIRTYN 307 Query: 317 LQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 P + D R N+ ++ G D+ ++ + + Sbjct: 308 Y-PQNRISDHRINLTLYRLDAIMAAGLFDEIIEPLITHYQ 346 >gi|304570793|ref|YP_002516272.2| peptide chain release factor 1 [Caulobacter crescentus NA1000] gi|22096040|sp|Q9A9V5|RF1_CAUCR RecName: Full=Peptide chain release factor 1; Short=RF-1 Length = 356 Score = 210 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 114/345 (33%), Positives = 180/345 (52%), Gaps = 13/345 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + R + + + E L +E L ++ + + L + Sbjct: 8 LDQVLDRFREVEARMGAAT---DGAEIVKLSKEHAELRPVAEAVERLAKLSAERAELDVM 64 Query: 76 ALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 A + + ++++ L + ++ A LEV AG GG E+ +A Sbjct: 65 ASDPEMAEMVRDEIQALDEKLPVMERELALMLAPKDKDENASAILEVRAGTGGDEAALFA 124 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+A+ + ++ E I +GE G K I G +G LK E GVHR+ R+ Sbjct: 125 GDLFRMYQRYAQTQGWRVEIDSISEGEMGGFKEIVASITGDGVFGRLKFESGVHRVQRVP 184 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS +++ V P + +EIEI ESD RIDTYR+SGAGGQHVN TDSAVRITH Sbjct: 185 ATEAQGRIHTSAATVAVLP-EAEDVEIEIKESDLRIDTYRSSGAGGQHVNKTDSAVRITH 243 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTGVVV E+SQH+N+A+A L+A+LY+++ + + + E+ K+++G G + Sbjct: 244 LPTGVVVTSS-EKSQHQNRARAMKNLKARLYDMQREALD--SARSEARKSQVGSGDRSER 300 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 IR+Y P V D R N+ + + +++GD LDD + +A + Sbjct: 301 IRTYNF-PQGRVTDHRINLTLYNLARIMEGDALDDVINPLIAEDQ 344 >gi|322385289|ref|ZP_08058934.1| peptide chain release factor RF1 [Streptococcus cristatus ATCC 51100] gi|321270548|gb|EFX53463.1| peptide chain release factor RF1 [Streptococcus cristatus ATCC 51100] Length = 359 Score = 210 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 98/348 (28%), Positives = 161/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + L + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E G K ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350 >gi|23012458|ref|ZP_00052537.1| COG0216: Protein chain release factor A [Magnetospirillum magnetotacticum MS-1] Length = 361 Score = 210 bits (533), Expect = 4e-52, Method: Composition-based stats. Identities = 108/349 (30%), Positives = 173/349 (49%), Gaps = 15/349 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + R + + D L RE LD ++ I + + + L Sbjct: 9 LDAILARHEIVTAQLADGS--AEAESIVQLSRELSELDGVVAAIHAYRAAEANLAGIRAL 66 Query: 76 ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E ++ + + + Q L AD A LE+ AG GG E+ Sbjct: 67 IDEPGGDPEMRALAAEEKPDAEEALEQAHRALQLMLLPKDAADEKSAILEIRAGTGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY ++AE + ++ E + +G G + +KG + + LK E G HR+ Sbjct: 127 ALFAGDLFRMYAKYAESKGWRVEVISESEGTVGGYREVVAEVKGRSVFSRLKFESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + +++ I+E+D +IDT RA GAGGQHVN T+SA+ Sbjct: 187 QRVPDTETQGRIHTSAATVAVLP-EAEEVDVVINEADLKIDTMRAQGAGGQHVNKTESAI 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTGVVV Q+ERSQHKN+A+A +LRA+L++ E + + + K ++G G Sbjct: 246 RITHLPTGVVVFVQEERSQHKNRARAMALLRARLFDAE--RSAKDSARAADRKAQVGSGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIKK 355 +IR+Y P V D R N+ +V+ G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQGRVTDHRINLTLYKLEEVMAGPALDEVIDALVTEHQ 351 >gi|295425486|ref|ZP_06818179.1| peptide chain release factor RF1 [Lactobacillus amylolyticus DSM 11664] gi|295064825|gb|EFG55740.1| peptide chain release factor RF1 [Lactobacillus amylolyticus DSM 11664] Length = 362 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 96/347 (27%), Positives = 167/347 (48%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + L DP + + + +E L + K+ + + ++ Sbjct: 8 LEGLAAHYEELQEMMADPEVINDTKRYMEVSKEEADLREVVQKYKKYKAYQKEIADNKKI 67 Query: 76 ALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 +E D +++ + + + E + L D D +E+ AGG E+ Sbjct: 68 ISDESDADLVEMAKEENSELEKELPELEEQIRILMLPKDPNDDKDIIMEIRGAAGGDEAS 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY ++AE++ +K ++ E G K ++I G Y LK E G HR+ Sbjct: 128 LFAGDLLRMYEKYAERQGWKVSMVDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ V P + ++I++ D R+D YR+SGAGGQH+N T SAVR Sbjct: 188 RIPVTESQGRVHTSTATVAVMP-EYEQVDIDLDPKDIRVDVYRSSGAGGQHINKTSSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV Q +RSQ +N+ +A +L++++Y+ + + K +G G Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYETQNRD--KYDAKRKNAVGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + V++G+LD+ + A + + Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQ 350 >gi|297157199|gb|ADI06911.1| peptide chain release factor 1 [Streptomyces bingchenggensis BCW-1] Length = 356 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 114/347 (32%), Positives = 179/347 (51%), Gaps = 13/347 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + + + L + DP + + EA L + L + + + D Sbjct: 1 MFEAVEELIGEHADLEKRLADPAVHADQREATRLGKRYAELTPIVGTYRSWKQTGEDIET 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ELA + D + + + + + + + + +D D LEV AG GG ES Sbjct: 61 ARELAQLDADFADEVKELEARR--EELTDRLRLLLVPRDPSDDKDVILEVKAGEGGEESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGE 184 +A LLRMY R+AE+ +KTE ++ ++ + G K + + G + LK E Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDANESDLGGYKDVQVAVKAKSNAEPGQGVWARLKYE 178 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ +S R HTS + + V P + +E+EIS++D RID YR+SG GGQ VN Sbjct: 179 GGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEVEVEISQNDLRIDVYRSSGPGGQSVN 237 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVRITH+PTG+VV CQ E+SQ +NK QA +LR++L ++ E A+ S+ Sbjct: 238 TTDSAVRITHLPTGIVVSCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREASDARRSQV 297 Query: 305 E-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 + +IR+Y P + D R + + VLDG+LD ++A Sbjct: 298 RTVDRSERIRTYNF-PENRISDHRVGFKAYNLDQVLDGELDPVIQAC 343 >gi|89890298|ref|ZP_01201808.1| peptide chain release factor 1 [Flavobacteria bacterium BBFL7] gi|89517213|gb|EAS19870.1| peptide chain release factor 1 [Flavobacteria bacterium BBFL7] Length = 358 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 91/342 (26%), Positives = 161/342 (47%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R +N P + + L +E + L + +E + E+ Sbjct: 5 LNIVKNRFDEVNDLIIQPDIISDQKRYVQLTKEYKDLKALMEVREEYMTLTANLDEAKEI 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 + D +++ K + + + D+ +A +E+ AGAGG E+ Sbjct: 65 IADGSDADMVEMAQMQYDEAKEAIPELEEKIRMMLVPKDPEDAKNAVMEIRAGAGGDEAS 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY ++ + + T ++ G G K L + G + YG LK E GVHR+ Sbjct: 125 IFAGDLFRMYEKYCSSKGWSTSVVDTSHGTSGGYKEIILEVNGEDVYGTLKFEAGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P ++ + ++ RI+ ++G GGQ VNTT SA++ Sbjct: 185 RVPQTETQGRVHTSAATVMVLPEAEEFDVE-LDMTEVRIERTTSTGPGGQSVNTTYSAIK 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 + H PTG++V CQ ++S HKN +A +LR++LYE+EL K+ E E K+ + G + Sbjct: 244 LHHEPTGMIVSCQDQKSSHKNLEKALKVLRSRLYEMELAKKME--ADSEKRKSMVSSGDR 301 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y V D R N+ ++++GD+ + Sbjct: 302 SAKIRTYNYS-QGRVTDHRINLTLYDLDNIINGDIQKIIDEL 342 >gi|317502848|ref|ZP_07960949.1| peptide chain release factor RF1 [Prevotella salivae DSM 15606] gi|315666037|gb|EFV05603.1| peptide chain release factor RF1 [Prevotella salivae DSM 15606] Length = 370 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 90/364 (24%), Positives = 161/364 (44%), Gaps = 20/364 (5%) Query: 7 LNCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 + + + D R ++T DP + + L +E + L + ++ K Sbjct: 1 MAENNSILEKLDGLESRFEEVSTLITDPDVIADQKRYVKLTKEWKDLGDIMNARKRYISC 60 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEV 121 L + EDD + + + LQ + + + D+ + +E+ Sbjct: 61 LDSIKEAKNILANEDDADMKEMAREELQENESLQPKLEEEIKLLLVPKDPEDAKNVQMEI 120 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG GG E+ +A L MY ++ + + + ++ +G G K I G + YG + Sbjct: 121 RAGTGGDEAALFAGDLFNMYKKYCDMKGWILSITDVSEGAVGGYKEIDFAISGTDVYGIM 180 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHR+ R+ +SN R TS +++ V P D I+E D + DT+R+SGAGGQ Sbjct: 181 KYESGVHRVQRVPVTESNGRMQTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQ 239 Query: 242 HVNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 +VN +S VR+ + ++++C + R Q KNK +A + L +++ E QK Sbjct: 240 NVNKVESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTFIHDREHQKY- 298 Query: 294 EIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 + +I + K+ + G + IR+Y P V D R L+G++ D + A Sbjct: 299 -VDDIADRRKSLVSTGDRSAKIRTYNF-PQGRVTDHRIGYTTHDLQGFLNGNIQDMIDAL 356 Query: 351 LAIK 354 + Sbjct: 357 TVAE 360 >gi|222153023|ref|YP_002562200.1| peptide chain release factor 1 [Streptococcus uberis 0140J] gi|254790901|sp|B9DS45|RF1_STRU0 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|222113836|emb|CAR41933.1| peptide chain release factor 1 [Streptococcus uberis 0140J] Length = 359 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 97/348 (27%), Positives = 163/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R L DP + + L +E + ++ ++ +D + E+ Sbjct: 7 LQSLEDRYEELGELLSDPEVVSDTKRFMELSKEEANTRETVATYRQYKDIIQSISDAEEM 66 Query: 76 ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E ++E + + + E + L D + LE+ AGG E+ Sbjct: 67 IKESGGDPEIEEMAKEELKESKVAKEDYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY R+AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLDMYQRFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D RID Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEDVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G +D+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQ 350 >gi|212550868|ref|YP_002309185.1| peptide chain release factor 2 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212549106|dbj|BAG83774.1| peptide chain release factor 2 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 328 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 119/326 (36%), Positives = 194/326 (59%), Gaps = 11/326 (3%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 ++ AK ++ + + + +Q + + + + + +E + Sbjct: 1 MKDPGYAKKQIKAIGIIKSWVDAYNVVQTAVEELQLAFDFNK--EGVVSEEEVDKVYSDV 58 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 L +E + +++L E D A ++++AGAGGTE+QDW ML RMY+RW E + +K Sbjct: 59 VLLIEQLELKNMLHSEEDHLGAVIKINAGAGGTEAQDWVAMLYRMYSRWCEVKMYKVNIT 118 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 +G++AGIK+ TL ++G +A+G+LK E GVHRLVR+SPY++ +R TSF+S+ V P++ Sbjct: 119 NWLEGDDAGIKTVTLQVEGDDAFGYLKSENGVHRLVRVSPYNAQGKRMTSFASVAVVPLI 178 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP--------TGVVVQCQQER 267 DD+IEI+I+ D DT+R+SGAGGQ+VN ++ VR+ + + +V++ + R Sbjct: 179 DDTIEIDINLGDITWDTFRSSGAGGQNVNKVETGVRLHYNYKDPNSGETSEIVIENTESR 238 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQ NK A +L++ LY+LEL++R + E+ K +I WG QIRSYV + VKD R Sbjct: 239 SQFGNKDNAIRLLKSHLYKLELKRRRQAFAKIEAHKKKIEWGSQIRSYVFDD-RRVKDHR 297 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAI 353 T + ++ V+DGDLDD +KA L Sbjct: 298 TGWQTSNVQAVMDGDLDDLIKAYLMA 323 >gi|284053267|ref|ZP_06383477.1| peptide chain release factor 2 [Arthrospira platensis str. Paraca] Length = 309 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 138/296 (46%), Positives = 199/296 (67%), Gaps = 1/296 (0%) Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 ++ + L D + EL EDD S+ QE N+ + +++ + + LLSG D + A L Sbjct: 5 QDWRKTLEDTGAIAELLELEDDESLRQEAESNVVHLGRDIDRWELQQLLSGPYDRSGAVL 64 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 ++AGAGGT++QDWA MLLRMYTRW E + +K E+ +G+EAGIKSATL ++GP AYG Sbjct: 65 TINAGAGGTDAQDWAEMLLRMYTRWGEAQGYKVHLAELSEGDEAGIKSATLEMEGPYAYG 124 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGA 238 +LK E+G HRLVRISP+++N +R TSF+ + + P+ + +I ++I E D I T RA G Sbjct: 125 YLKAEKGTHRLVRISPFNANGKRQTSFAGVEIMPILDEGAINLDIPEKDLEITTSRAGGK 184 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ+VN ++AVRI HIPTG+ V+C QERSQ +N+ +A +L+AKL + ++R + Sbjct: 185 GGQNVNKVETAVRIVHIPTGIAVRCTQERSQLQNREKAMALLKAKLLVVAQEQRAQAIAE 244 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 E WG QIR+YV PYQMVKDLRT E T+ +DV++G+LD F++A L + Sbjct: 245 IRGDLVEAAWGNQIRNYVFHPYQMVKDLRTGEETTAINDVMNGELDGFIQAYLRQE 300 >gi|33241929|ref|NP_876870.1| peptide chain release factor 2 [Chlamydophila pneumoniae TW-183] gi|33236439|gb|AAP98527.1| translation releasing factor RF-2 [Chlamydophila pneumoniae TW-183] Length = 253 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 142/247 (57%), Positives = 182/247 (73%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 +LSGEAD N +L ++AGAGGTES DW ML RMY+RWA K ++ E ++ DGE GIK Sbjct: 1 MLSGEADKNSCFLTINAGAGGTESCDWVEMLFRMYSRWATKHQWALEVVDRLDGEVVGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 T+ G AYG+ K E+GVHRLVRISP+DSN +RHTSF+S+ V+P +DD I+IEI + Sbjct: 61 HVTVKFSGMYAYGYAKAERGVHRLVRISPFDSNGKRHTSFASVDVFPEIDDQIKIEIRPN 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDT+R+SGAGGQHVN T+SAVRITH+P+GVVV CQ ERSQ +N+ ML+AKLY+ Sbjct: 121 DLRIDTFRSSGAGGQHVNVTESAVRITHLPSGVVVSCQNERSQIQNRESCMKMLQAKLYQ 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDD 345 LQ+R E ++ K EI WG QIR+YV QPY +VKD+RT E + +LDG+ LD+ Sbjct: 181 QVLQERLEKQSLDRKDKKEIAWGSQIRNYVFQPYTLVKDVRTGHETGNVQAMLDGELLDE 240 Query: 346 FMKATLA 352 F+KA LA Sbjct: 241 FIKAYLA 247 >gi|111225294|ref|YP_716088.1| peptide chain release factor 1 [Frankia alni ACN14a] gi|111152826|emb|CAJ64570.1| peptide chain release factor RF-1 [Frankia alni ACN14a] Length = 362 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 113/340 (33%), Positives = 175/340 (51%), Gaps = 15/340 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V + + + DP + + +A+ L R L + +E++ L Sbjct: 11 LDGLVAEHAEIEGQLADPAVHNDPAKARALSRRYAQLAPVVDLARELER----VEGDLAA 66 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTESQDW 133 A E + ++L ++ + L DA LEV AGAGG ES + Sbjct: 67 ARELAAEDTSFRGEVDDLDVELAGLNERLRAYLVPVDPDDARDAILEVKAGAGGEESALF 126 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG------PNAYGWLKGEQGV 187 A LLRMY R+AE+R +KTE L+ + + G + ++ +K YG L+ E GV Sbjct: 127 AGDLLRMYLRYAERRGWKTEILDANPSDLGGYRDVSVAVKARGSAAGDGVYGRLRFEGGV 186 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS + + V P + +++EI +D RID +R+SG GGQ VNTTD Sbjct: 187 HRVQRVPVTESAGRIHTSAAGVLVLP-EAEEVDVEIDPNDLRIDVFRSSGPGGQSVNTTD 245 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-I 306 SAVRITH+PTG+VV CQ E+SQ +NK A +LRA+L + +K E A++ +S+ + Sbjct: 246 SAVRITHVPTGLVVSCQNEKSQLQNKESALRILRARLLGVAREKAEAEASLARASQVRTV 305 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ++R+Y + D R + + VLDG+LD+ Sbjct: 306 DRSERVRTYNFA-ENRISDHRVGYKAHNLDQVLDGELDEV 344 >gi|111018484|ref|YP_701456.1| peptide chain release factor 1 [Rhodococcus jostii RHA1] gi|119361595|sp|Q0SGN8|RF1_RHOSR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|110818014|gb|ABG93298.1| peptide chain release factor RF1 [Rhodococcus jostii RHA1] Length = 359 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 113/346 (32%), Positives = 172/346 (49%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ + + L + DP L + A+ + L ++ +++ D EL Sbjct: 10 IDDILAEHAGLEQQLADPALHNDPSAARKAGKRFAELAPIMATYAKLKSAQDDLDAAREL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A ++ + + + D +D LEV +G GG ES +A+ Sbjct: 70 AADDSSFAAEVPELEAQVLELDKALTDLL--APRDPHDGDDVVLEVKSGEGGEESALFAS 127 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190 L RMY R+AE+ ++ E L+ + G K ATL IK + LK E GVHR+ Sbjct: 128 DLARMYVRYAERHGWRVEILDATVSDLGGYKDATLSIKSKGDVRDGVWARLKFEGGVHRV 187 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS + + +YP ++ E++I E+D RID YR+SG GGQ VNTTDSAV Sbjct: 188 QRVPVTESQGRVHTSAAGVLIYPEPEEVEEVQIDETDLRIDVYRSSGKGGQGVNTTDSAV 247 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG+VV CQ ERSQ +NKA+A +L A+L + + A+ G S+ + Sbjct: 248 RITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQAAAEEAADAEASAGRQSQVRTVDRS 307 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + + VLDG+LD + A + Sbjct: 308 ERIRTYNF-PENRITDHRIGFKSHNLDAVLDGELDALLDALGKSDR 352 >gi|123969269|ref|YP_001010127.1| peptide chain release factor 1 [Prochlorococcus marinus str. AS9601] gi|229470358|sp|A2BTA9|RF1_PROMS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|123199379|gb|ABM71020.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. AS9601] Length = 364 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 100/348 (28%), Positives = 168/348 (48%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 A + L + DP + + + + + RER L+ + ++ D + L Sbjct: 10 LKTASESFENLEVQLADPDIANDPKKLESIARERSKLEPLVIDFNKLLDTDKEIEDSKNL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130 E + ++ + E++ + + D LE+ AGAGG E+ Sbjct: 70 LKENRNDKEMESLINEELINLEEIKNELIQKTTIALLPKDPRDERSVMLEIRAGAGGNEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY R+ +K + + + + + G K + +KG + Y LK E GVHR+ Sbjct: 130 CIWAGDLARMYERYGQKIGWSVKPVSASESDMGGFKELVISVKGDSVYSQLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P D +E++I D + T R+ GAGGQ+VN ++A+ Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADPVEVKIDPIDLEVGTARSGGAGGQNVNKVETAI 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ V C QERSQ +N+ +A +LRAKLYE++L +E A +++G G Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQL--KEANAKERSQRLSQVGTGD 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + D R S +L G LD+ + A +A ++ Sbjct: 307 RSEKIRTYNFKD-NRTTDHRLG-SNFSLEPILAGQLDEVIDACIAQEQ 352 >gi|319939134|ref|ZP_08013498.1| peptide chain release factor 1 [Streptococcus anginosus 1_2_62CV] gi|319812184|gb|EFW08450.1| peptide chain release factor 1 [Streptococcus anginosus 1_2_62CV] Length = 359 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 98/348 (28%), Positives = 160/348 (45%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ ++ + L + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVATYRDYKRVLQNITDAEEM 66 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + +K E +E G K ++ G + Y LK E G HR+ Sbjct: 127 SLFAGDLLTMYQKYAESQGWKFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D RID Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEIVDALVLYDQ 350 >gi|322391878|ref|ZP_08065343.1| peptide chain release factor RF1 [Streptococcus peroris ATCC 700780] gi|321145358|gb|EFX40754.1| peptide chain release factor RF1 [Streptococcus peroris ATCC 700780] Length = 359 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 101/348 (29%), Positives = 164/348 (47%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + L + + E+ Sbjct: 7 LQTVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKEAGGDADLEEMAKQELKDAKSEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 Q +A LL+MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D RID Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350 >gi|15616790|ref|NP_240002.1| peptide chain release factor 1 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681545|ref|YP_002467930.1| peptide chain release factor 1 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682101|ref|YP_002468485.1| peptide chain release factor 1 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471228|ref|ZP_05635227.1| peptide chain release factor 1 [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11134308|sp|P57268|RF1_BUCAI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790868|sp|B8D8X1|RF1_BUCA5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790869|sp|B8D775|RF1_BUCAT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|25299668|pir||H84949 peptide chain release factor 1 [imported] - Buchnera sp. (strain APS) gi|10038853|dbj|BAB12888.1| peptide chain release factor 1 [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219621834|gb|ACL29990.1| peptide chain release factor 1 [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624388|gb|ACL30543.1| peptide chain release factor 1 [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311085914|gb|ADP65996.1| peptide chain release factor 1 [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311087068|gb|ADP67148.1| peptide chain release factor 1 [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 361 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 116/340 (34%), Positives = 173/340 (50%), Gaps = 7/340 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R + ++ N K L +E L I + E + D + L Sbjct: 9 LKSLRNRYQEIEIMLTQKNVISNRENLKTLSKEYLKLSEIIKYFIEWEKLEVDIENVNIL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND-AYLEVHAGAGGTESQDWA 134 + + + +E + K +E K + LL + + ++E+ + GG ES +A Sbjct: 69 LNDVEIQGMAEEELYFFNKKKKALEKKINQLLLPEDPNDKHSCFIEIRSATGGDESSIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+AE +K E + + E+ G K I G A G LK E G HR+ R+ Sbjct: 129 GELFRMYLRYAESYSWKVEIMNTSESEKGGFKEIIAKITGRGACGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V PV + + EI+ SD +IDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSTCTVAVMPVTPKTEKEEINSSDLKIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311 IPTG VV+CQ ERSQHKNKA+A ++L A++Y +L+K + + K +G G + Sbjct: 249 IPTGNVVECQDERSQHKNKAKALSILSARVYAAKLEKDRQES--SSMRKILLGTGERSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 R+Y P + D R N+ +VL G LD + + Sbjct: 307 NRTYNF-PQNRITDHRINLSIYKLDEVLQGKLDLLIDPII 345 >gi|85709577|ref|ZP_01040642.1| protein chain release factor A [Erythrobacter sp. NAP1] gi|85688287|gb|EAQ28291.1| protein chain release factor A [Erythrobacter sp. NAP1] Length = 355 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 112/346 (32%), Positives = 163/346 (47%), Gaps = 15/346 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLIL 72 D R + L + L E R+ L+ +K +++ + + Sbjct: 8 LDQIANRFAELEARMASGTL--EGEEFVAASRDYAELEPVAKIAGEVKAMREEIEGLEEM 65 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L + K AD+ A LE+ AG GG E+ Sbjct: 66 LADPEMKAMAEEELSAIREALPEKERSLAIALL--PRDRADAKPAMLEIRAGTGGDEAAL 123 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY ++A ++ ++ E + + E G K + G + LK E GVHR+ R Sbjct: 124 FAGDLFRMYEKYAAEQGWRVEPVSMSASEVGGFKEIVANVSGQGVFAKLKFESGVHRVQR 183 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS +++ V P D ++++I D +IDTYRASGAGGQHVNTTDSA+RI Sbjct: 184 VPVTESGGRIHTSAATVAVLP-EPDEVDVQIDPGDLKIDTYRASGAGGQHVNTTDSAIRI 242 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH PTG+VV CQ RSQHKN+ +A +LRA+LYE E E+ K +G G Sbjct: 243 THEPTGLVVTCQDGRSQHKNREKAMQVLRARLYEKTRD--EAQGAEAEARKAMVGSGDRS 300 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIK 354 +IR+Y P V D R + +VL G LD+ + A +A Sbjct: 301 ERIRTYNF-PQGRVTDHRIGLTLHKLEEVLAGPGLDELVDALIAED 345 >gi|291298828|ref|YP_003510106.1| peptide chain release factor 1 [Stackebrandtia nassauensis DSM 44728] gi|290568048|gb|ADD41013.1| peptide chain release factor 1 [Stackebrandtia nassauensis DSM 44728] Length = 367 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 111/350 (31%), Positives = 169/350 (48%), Gaps = 16/350 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + S L + DP + + A+ + R L + E+ D EL Sbjct: 10 LAVLLAEHSELEKQLADPSIHADAALARRVGRRYAELSPIAACNAELDTVKEDLAAAEEL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A ++ + + E + L DS D +E+ AG GG ES +A Sbjct: 70 AGDDPEFAAEATALRERIPQLEEKLAE--LLLPRDPDDSRDVIIEIKAGEGGAESALFAA 127 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVH 188 LLRMY R+AEK + E ++ + E G+K ++ +K + +K E GVH Sbjct: 128 DLLRMYLRYAEKHGWVAEIMDSQESEMGGVKDVSVAVKTKGNPEGGHGVWSRMKFEGGVH 187 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS + + V P + +++EI+ + RID YR+SG GGQ VNTTDS Sbjct: 188 RVQRVPVTESQGRIHTSAAGVLVMP-EAEEVDVEINMHELRIDVYRSSGPGGQSVNTTDS 246 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI-- 306 AVRITHIPTGVV CQ E+SQ +NK A +LRA+L L ++ E A G + K+++ Sbjct: 247 AVRITHIPTGVVASCQNEKSQLQNKEAAMRILRARL--LAAKQEEAEAAAGAARKSQVRT 304 Query: 307 -GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 ++R+Y P V D R + V+ GD+D + A ++ Sbjct: 305 VDRSERVRTYNF-PQNRVTDHRIGYTSHNLDQVMQGDMDGVLDALATAER 353 >gi|57505831|ref|ZP_00371756.1| peptide chain release factor 1 [Campylobacter upsaliensis RM3195] gi|57015861|gb|EAL52650.1| peptide chain release factor 1 [Campylobacter upsaliensis RM3195] Length = 355 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 112/340 (32%), Positives = 181/340 (53%), Gaps = 9/340 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 +R LNT D + ++ + L +E+++L+ + K+ + L L + + Sbjct: 11 KRYEELNTLLSDTKIINDIEKMTSLSKEQKNLEPIVLKTKDYFNTLTQIEDNKALLNDPE 70 Query: 81 DCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139 +E + + E + L D + +LE+ AG GG E+ + L++ Sbjct: 71 FSELAKEELKNLEEEKINFEEEIKILLLPKDPNDEKNIFLEIRAGTGGDEASLFVGDLVK 130 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 Y ++A+ R +K E + +G G K +L+KG AY LK E G HR+ RI +S Sbjct: 131 AYAKYADLRGYKIEIVSSSEGSAGGFKELIMLVKGTGAYSRLKFESGTHRVQRIPQTESQ 190 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS ++ + P D IEI+I+ +D +ID R+SG GGQ VNTTDSAVRITHIP+G+ Sbjct: 191 GRIHTSAITVAIMP-EVDDIEIQINPNDLKIDVMRSSGHGGQSVNTTDSAVRITHIPSGL 249 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316 VV Q +SQHKNK A +L+A+LY E+Q+ E +A E+ K+++G G +IR+Y Sbjct: 250 VVVNQDGKSQHKNKESAMKILKARLY--EMQESERLAKESEARKSQVGSGDRSERIRTYN 307 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLAIKK 355 P + D R N+ +++G L D+ ++ +A + Sbjct: 308 F-PQNRISDHRINLTLYRLDAIMEGGLFDELIEPLIAHHQ 346 >gi|157414134|ref|YP_001485000.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT 9215] gi|238686831|sp|A8G733|RF1_PROM2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|157388709|gb|ABV51414.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT 9215] Length = 364 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 101/341 (29%), Positives = 169/341 (49%), Gaps = 13/341 (3%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 L + DP + + + + + RER L+ + ++ D + L E + Sbjct: 17 FENLEVQLADPDIANDPKKLESIARERSKLEPLVIDFNKLLDTDKEIEDSKNLLKENRND 76 Query: 83 SILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTESQDWANML 137 ++ + I E + + + D LE+ AGAGG+E+ WA L Sbjct: 77 KEMESLINEELIILEEFKNELIQKTTIALLPKDPRDERSVMLEIRAGAGGSEACIWAGDL 136 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY R+ +K + +++ + + G K + +KG + Y LK E GVHR+ R+ + Sbjct: 137 ARMYERYGQKVGWSVKSVSASESDMGGFKELVISVKGDSVYSQLKFEAGVHRVQRVPATE 196 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 S R HTS +++ V P D +E++I +D I T R+ GAGGQ+VN ++A+ + H PT Sbjct: 197 SQGRVHTSTATVAVMP-EADPVEVKIDPTDLEIGTARSGGAGGQNVNKVETAIDLLHKPT 255 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314 G+ V C QERSQ +N+ +A +LRAKLYE++L+ E A +++G G +IR+ Sbjct: 256 GIRVFCTQERSQLQNRERAMEILRAKLYEIQLK--EANAKERSQRLSQVGTGDRSEKIRT 313 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 Y + D R S +L G LD+ + A +A ++ Sbjct: 314 YNFKD-NRTTDHRLG-SNFSLEPILAGQLDEVINACIAQEQ 352 >gi|307704777|ref|ZP_07641673.1| peptide chain release factor 1 [Streptococcus mitis SK597] gi|307621686|gb|EFO00727.1| peptide chain release factor 1 [Streptococcus mitis SK597] Length = 359 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 98/348 (28%), Positives = 161/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + L + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEESSSRDTVTAYREYKQVLQNIVDAEEM 66 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E G K ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350 >gi|296138963|ref|YP_003646206.1| peptide chain release factor 1 [Tsukamurella paurometabola DSM 20162] gi|296027097|gb|ADG77867.1| peptide chain release factor 1 [Tsukamurella paurometabola DSM 20162] Length = 362 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 118/350 (33%), Positives = 174/350 (49%), Gaps = 13/350 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ + S L + DP L + A+ + + L ++ ++++ D EL Sbjct: 9 IDDILAEYSGLEQQMSDPALHNDASAARKVGKRFAELAPIMATHRKLEAAREDRAAAQEL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A ++ + + DS+D LEV +G GG ES +A Sbjct: 69 AADDSSFADEVTVLTEQIDALEQQLTDLL--APRDPHDSDDVVLEVKSGEGGEESALFAG 126 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG---------PNAYGWLKGEQG 186 L RMY R+AE+R +K E L + G K AT IK + +K E G Sbjct: 127 DLARMYLRYAEQRGWKVETLGATYSDLGGYKDATFAIKSRGPGADGAIDGVWARMKFEGG 186 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S R HTS + + VYP D+ E++I ESD RID YR+SG GGQ VNTT Sbjct: 187 VHRVQRVPATESQGRIHTSAAGVLVYPEPDEVEEVQIDESDLRIDVYRSSGKGGQGVNTT 246 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE- 305 DSAVRITH+PT +VV CQ ERSQ +NKA+A +L A+L L ++ E A+ +++ Sbjct: 247 DSAVRITHLPTNIVVTCQNERSQLQNKARAMQVLAARLQALREEEAEAAASDSRAAQIRT 306 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + +IR+Y P + D R + + VLDG+LD + A A + Sbjct: 307 VDRSERIRTYNF-PENRIADHRIGFKAHNLDQVLDGELDPLLDALQAADR 355 >gi|148984974|ref|ZP_01818217.1| peptide chain release factor 1 [Streptococcus pneumoniae SP3-BS71] gi|147922672|gb|EDK73789.1| peptide chain release factor 1 [Streptococcus pneumoniae SP3-BS71] Length = 354 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 98/348 (28%), Positives = 160/348 (45%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + + +E + L + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNIVDAEEM 66 Query: 76 ALEEDDCSI-----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKESGGDADLEELAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E G K ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350 >gi|254411738|ref|ZP_05025514.1| peptide chain release factor 2 [Microcoleus chthonoplastes PCC 7420] gi|196181460|gb|EDX76448.1| peptide chain release factor 2 [Microcoleus chthonoplastes PCC 7420] Length = 305 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 142/299 (47%), Positives = 203/299 (67%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + ++ + L D +LEL E D +LQE N+ ++ E++ + E LLSG D+N Sbjct: 3 LQQYQQWKSNLEDAKAVLELLELETDEGLLQEAQTNVVKLNRELDRWELEQLLSGPYDAN 62 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 A L ++AGAGGT++QDWA MLLRMYTRWAE + +K + E +G+EAGIKSATL I+G Sbjct: 63 GAVLAINAGAGGTDAQDWAEMLLRMYTRWAENQGYKVQLAEFSEGDEAGIKSATLEIQGL 122 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 AYG+LK E+G HRLVRISPY++N +R TSF+ + V P++++ ++++I E+D I T R+ Sbjct: 123 RAYGYLKAEKGTHRLVRISPYNANGKRQTSFAGVEVMPILNEDVDLDIPETDLEITTSRS 182 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 G GGQ+VN ++AVR+ HIPT + V+C QERSQ +NK +A +L+AKL + ++R + Sbjct: 183 GGKGGQNVNKVETAVRVKHIPTDIAVRCTQERSQLQNKEKALALLKAKLLVIAQEQRAQE 242 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 E WG QIR+YV PYQ+VKDLRTN+E T DVL+G LD F++A L + Sbjct: 243 IAEIRGDMVEAAWGNQIRNYVFHPYQLVKDLRTNVETTGVDDVLNGTLDPFIEAYLRQE 301 >gi|304321558|ref|YP_003855201.1| peptide chain release factor 1 [Parvularcula bermudensis HTCC2503] gi|303300460|gb|ADM10059.1| peptide chain release factor 1 [Parvularcula bermudensis HTCC2503] Length = 360 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 120/347 (34%), Positives = 169/347 (48%), Gaps = 14/347 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72 + R + + K E L +E L + + + L D L Sbjct: 7 LNALKTRFAEVEAKMAKAT---EADEIVRLSKEHAELKPVAEAALLLTDARQGLLDAEGL 63 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + E +E + +I+ Q L +AD LEV AG GG E+ Sbjct: 64 TKSTDPEMAEMAKEEIASLTGQIERLEADLQLMLLPKDKADQAPVILEVRAGTGGDEAAL 123 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY R+A R ++ E L + G K + G N +G LK E GVHR+ R Sbjct: 124 FAGDLFRMYQRYAATRGWRVEILSATESGVGGYKEIQANVSGDNVFGRLKFESGVHRVQR 183 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ V P + I+I+I ESD RID +RASG GGQ VNTTDSAVRI Sbjct: 184 VPETETQGRIHTSAATVAVLP-EPEDIDIDIQESDLRIDVFRASGPGGQSVNTTDSAVRI 242 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTGVVV Q E+SQHKN+A+A +LRA+LYE E + K ++G G Sbjct: 243 THIPTGVVVSQQDEKSQHKNRAKAMKVLRARLYEAERSRVAAER--AAERKGQVGSGDRS 300 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 +IR+Y P V D R N+ V+ G+ +DD + A + + Sbjct: 301 ERIRTYNF-PQGRVTDHRINLTLYKLDKVIAGEAVDDLIDALIVEDQ 346 >gi|269114934|ref|YP_003302697.1| Peptide chain release factor 1 [Mycoplasma hominis] gi|268322559|emb|CAX37294.1| Peptide chain release factor 1 [Mycoplasma hominis ATCC 23114] Length = 359 Score = 209 bits (532), Expect = 5e-52, Method: Composition-based stats. Identities = 109/342 (31%), Positives = 176/342 (51%), Gaps = 6/342 (1%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC----DNLILL 73 + + L K DP+++ ++ + +E+ L K+ Q+ IL Sbjct: 11 SIKNQYDELTEKLNDPNIYNDIKAYTRIAKEKSELQEIYDAFKKYQNIEELYFLSKEILT 70 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 +E + + + +++ E + L E D D +E+ AGG E+ + Sbjct: 71 NEKDQELIELAKNDIDNQMNQLQEIEEEIKELLLPQDENDKRDVIMEIRGAAGGDEANIF 130 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 + L +MY ++AE + FK + ++ G G IKG + LK E+GVHR+ R+ Sbjct: 131 SGDLFKMYQKYAEIKGFKIKIIDSTYGAAGGYSQIVFSIKGEKVFSQLKFERGVHRVQRV 190 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 ++ R HTS +++ V P VD+ ++IEI D ++ +R+SGAGGQ VNTTDSAVRIT Sbjct: 191 PATETQGRVHTSTATVTVLPEVDEDVKIEIRPEDIEVNVFRSSGAGGQSVNTTDSAVRIT 250 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H PTG+VV Q ERSQ +NK A +L+++LYELEL+KREE + +IR Sbjct: 251 HKPTGLVVTSQDERSQIQNKETALKVLKSRLYELELRKREEAESGLRKLAGTGDRSEKIR 310 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +Y P + D R + V++G+LD ++A +A +K Sbjct: 311 TYNY-PQDRITDHRIGFSTS-LKVVMEGELDKIIEALIADEK 350 >gi|262282281|ref|ZP_06060049.1| peptide chain release factor 1 [Streptococcus sp. 2_1_36FAA] gi|262261572|gb|EEY80270.1| peptide chain release factor 1 [Streptococcus sp. 2_1_36FAA] Length = 359 Score = 209 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 100/348 (28%), Positives = 164/348 (47%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + L + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 Q +A LL+MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350 >gi|228472858|ref|ZP_04057615.1| peptide chain release factor 1 [Capnocytophaga gingivalis ATCC 33624] gi|228275440|gb|EEK14217.1| peptide chain release factor 1 [Capnocytophaga gingivalis ATCC 33624] Length = 357 Score = 209 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 96/346 (27%), Positives = 169/346 (48%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D QR ++ P++ + L +E + L + +E + E+ Sbjct: 5 LDIVKQRFDEVSDLIIQPNIIADQKRYVQLTKEYKELKQLMDKRQEYITVTRNITEAEEI 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + L+ K + + F + DS +A +E+ AG GG E+ Sbjct: 65 IKENIDPEMTEMARLQLEEAKERLPQLEEEIKFLLIPKDPEDSKNAVMEIRAGTGGDEAS 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+++ + + + +++++G G K L + G + YG LK E GVHR+ Sbjct: 125 IFAGDLYRMYSKYCQDKGWSVSVMDMNEGTSGGFKEIILEVNGEDVYGTLKFEAGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P ++ ++ D +I ++G GGQ VNTT SA++ Sbjct: 185 RVPQTETQGRVHTSAATVMVLPEAEEFDVE-LNMEDVKIIRTTSTGPGGQSVNTTYSAIQ 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 + HIPTG+ V+CQ E+SQHKN +A +LR++LYE+EL K+ E K+ + G + Sbjct: 244 LQHIPTGIEVRCQDEKSQHKNLDKALKVLRSRLYEMELAKKME--ADSARRKSMVSSGDR 301 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P V D R + ++++GD+ + + Sbjct: 302 SAKIRTYNY-PQGRVTDHRIGLTLYDLGNIMNGDIQRLIDELQLAE 346 >gi|149195429|ref|ZP_01872512.1| peptide chain release factor 1 [Caminibacter mediatlanticus TB-2] gi|149134434|gb|EDM22927.1| peptide chain release factor 1 [Caminibacter mediatlanticus TB-2] Length = 355 Score = 209 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 106/348 (30%), Positives = 180/348 (51%), Gaps = 12/348 (3%) Query: 16 WDNAV---QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 + ++ + +N K P + +++ + L RE + L+ ++ KE ++ L + Sbjct: 3 LEKLKPFVEKYNEINQKLSSPEITKDIKQMTKLSREARSLEEIVNKAKEYEELLNNLEEA 62 Query: 73 LELALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 + + + +E + +++ E + L D + +LE+ AG GG E+ Sbjct: 63 KMMLDDAEMSELAKEEIKEIEEKLPKLEEEIKLLLLPKDPNDDKNIFLEIRAGTGGDEAA 122 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + L++ Y R+A+ + +K E + + G K LLIKG AY LK E G HR+ Sbjct: 123 LFVGDLMKAYLRYADNKGWKVEIVSESKNDIGGYKEIILLIKGEGAYSRLKYEGGTHRVQ 182 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS ++ V P D ++IE+ D +I+ RA GAGGQHVN T+SAVR Sbjct: 183 RIPATESQGRIHTSAVTVAVMP-EVDDVDIELDPKDIKIEVMRAGGAGGQHVNKTESAVR 241 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTG+ V Q ERSQ +NK +A +L+A++YE ++R E IG+ K+++G G Sbjct: 242 MTHIPTGITVSMQDERSQQRNKEKALQILKARVYEKLEKERLE--KIGKERKSQVGSGDR 299 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD-GDLDDFMKATLAIKK 355 +IR+Y P + D R + +++ G D+ + +A + Sbjct: 300 SERIRTYNY-PQNRITDHRIGLTLYRLEQIMNEGLFDEIIDPLIAHYQ 346 >gi|157825493|ref|YP_001493213.1| peptide chain release factor 2 [Rickettsia akari str. Hartford] gi|157799451|gb|ABV74705.1| peptide chain release factor 2 [Rickettsia akari str. Hartford] Length = 285 Score = 209 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 159/253 (62%), Positives = 197/253 (77%) Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 + E L SGEAD N+ +LE++AGAGGTES DWA++++RMY R+AE+ FKTE + + +G Sbjct: 27 KFETECLFSGEADGNNCFLEINAGAGGTESHDWASIMMRMYLRFAERLGFKTEIINMLNG 86 Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220 EE GIKS T+ I G AYGW K E GVHRLVRISP+++ +R TSF+S WVYP +DD+I Sbjct: 87 EEVGIKSCTIRIIGKRAYGWFKTEAGVHRLVRISPFNAAGKRMTSFASSWVYPAIDDNIA 146 Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 I I + D RIDT+RASGAGGQHVNTTDSAVRITHIPTG V QCQ +RSQHKNKAQA ML Sbjct: 147 ITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITHIPTGTVTQCQSDRSQHKNKAQAMKML 206 Query: 281 RAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 +AKLYELE+QKR + N ++KT+ WG QIRSY+L PYQMVKDLRT+ E + VLD Sbjct: 207 QAKLYELEMQKRTDSVNEQNAAKTDSSWGYQIRSYILHPYQMVKDLRTDYETSDTKGVLD 266 Query: 341 GDLDDFMKATLAI 353 GDL++F+ A LA+ Sbjct: 267 GDLEEFVSANLAM 279 >gi|254451602|ref|ZP_05065039.1| peptide chain release factor 1 [Octadecabacter antarcticus 238] gi|198266008|gb|EDY90278.1| peptide chain release factor 1 [Octadecabacter antarcticus 238] Length = 344 Score = 209 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 111/338 (32%), Positives = 168/338 (49%), Gaps = 12/338 (3%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 +R FL + + + RE L + ++ QD + + Sbjct: 2 QITERFEFLEAQMGEG---LGGEAFVAVSREYAELRPVVEVVRTYQDLTAEIEGAEAMLS 58 Query: 78 EEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 + + + + L++ + + AD A LE+ G GG E+ +A Sbjct: 59 DPEMKELAEMELPQLRQQLPAAEAAVKLALIPKDAADGKPALLEIRPGTGGDEAALFAAD 118 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 LLRMY R+AE R + E LE E GIK T I G N + +K E GVHR+ R+ Sbjct: 119 LLRMYQRYAENRGWTFEILEESQSELGGIKEVTARIAGNNVFARMKYESGVHRVQRVPET 178 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S R HTS +++ V P + ++I+I+ +D RIDT RASG+GGQHVNTTDSAVRITH+P Sbjct: 179 ESGGRIHTSAATVAVLP-EAEDVDIQINANDIRIDTMRASGSGGQHVNTTDSAVRITHMP 237 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 +G+VV E+SQH+N+ A +L+ +LY+ E QK + ++G G +IR Sbjct: 238 SGIVVTSS-EKSQHRNREIAMQVLKTRLYDAERQKVHDER--SADRAAQVGSGDRSERIR 294 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +Y P + D R N+ VL GDLD+ + + Sbjct: 295 TYNF-PQGRMTDHRINLTLYKLDAVLQGDLDEVIDGLI 331 >gi|325689728|gb|EGD31732.1| peptide chain release factor RF1 [Streptococcus sanguinis SK115] Length = 359 Score = 209 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 98/348 (28%), Positives = 163/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + L + ++ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKKVLQNITDAEDM 66 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 Q +A LL+MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350 >gi|150025963|ref|YP_001296789.1| peptide chain release factor 1 [Flavobacterium psychrophilum JIP02/86] gi|166223557|sp|A6H0W3|RF1_FLAPJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|149772504|emb|CAL43987.1| Peptide chain release factor 1 (RF-1) [Flavobacterium psychrophilum JIP02/86] Length = 357 Score = 209 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 100/346 (28%), Positives = 175/346 (50%), Gaps = 12/346 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D Q+ ++ P + + L +E + L + + E + + Sbjct: 1 MLDRLQIIKQKFDEISDLIIQPDVIADQKRYVALNQEYKGLKSLVEKRDEYVILMANIEE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 E+ + D +++ L+ K + + F + D+ + +E+ AG GG Sbjct: 61 ANEIIADGSDADMVEMAKMQLEEAKERLPELEEEIKFLLIPKDAEDAKNVMVEIRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYT++ E R ++T +++++G G K + G + YG LK E GV Sbjct: 121 DEASIFAGDLFRMYTKYCENRGWRTSVVDMNEGTSGGFKEVIFEVTGEDVYGTLKFEAGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS +++ V P ++ I +D R+D + +SG GGQ VNTT Sbjct: 181 HRVQRVPQTETQGRVHTSAATVMVLPEAEEFDVQ-IDMNDVRVDFFCSSGPGGQSVNTTK 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V QCQ ++SQHKNK +A+ +LR++LYE EL K++ + + +++ Sbjct: 240 SAVRLTHIPTGLVAQCQDQKSQHKNKDKAFGVLRSRLYEQELAKKQADDAVKRT--SQVS 297 Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G + IR+Y V D R ++ V++G + F+ Sbjct: 298 SGDRSAKIRTYNYS-QGRVTDHRIGLDVFDMDGVMNGKIQKFVDEL 342 >gi|332360425|gb|EGJ38236.1| peptide chain release factor RF1 [Streptococcus sanguinis SK355] Length = 359 Score = 209 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 98/348 (28%), Positives = 163/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + L + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVAAYREYKKVLQNITDAEEM 66 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + QE + + E + L D + LE+ AGG E+ Sbjct: 67 IKDASGDADLEEMAKQELKNAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 Q +A LL+MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350 >gi|91217382|ref|ZP_01254342.1| peptide chain release factor 1 [Psychroflexus torquis ATCC 700755] gi|91184490|gb|EAS70873.1| peptide chain release factor 1 [Psychroflexus torquis ATCC 700755] Length = 358 Score = 209 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 98/346 (28%), Positives = 175/346 (50%), Gaps = 12/346 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + QR ++ P + N L +E + L + + + + Sbjct: 1 MLDKLNFIKQRFDEVSDLIIQPDIMSNQKRYIELSKEYKDLKAIMDEREIYIELTDNLKE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 ++ E D +++ K+E+ + + D+ +A +EV AGAGG Sbjct: 61 ANDIISNESDAEMVEMAKLQYDEAKVELPNLEEKIRMMLIPKDPEDAKNAVVEVRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A + RM +++ E + +K + ++ ++G G K + G + YG LK E GV Sbjct: 121 DEASIFAGDIFRMLSKYCEHKGWKVDVVDYNEGTNGGYKEIQFEVSGDDVYGTLKYEAGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS +++ V+P ++ ++ + R+D + +SG GGQ VNTT Sbjct: 181 HRVQRVPQTETQGRVHTSAATVMVFPEAEEFDIE-VNPKEVRVDYFCSSGPGGQSVNTTY 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH PTG+V QCQ ++SQHKNK +A+ +LR++LYE+EL K++ E + + Sbjct: 240 SAVRLTHEPTGIVAQCQDQKSQHKNKEKAFRVLRSRLYEMELAKKQAE--DAEKRGSMVT 297 Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G + IR+Y V D R N+ ++++GDL+ + Sbjct: 298 SGDRSAKIRTYNYS-QSRVTDHRINLTLYDLDNIINGDLEKIINEL 342 >gi|288925782|ref|ZP_06419713.1| peptide chain release factor 1 [Prevotella buccae D17] gi|315608268|ref|ZP_07883258.1| peptide chain release factor RF1 [Prevotella buccae ATCC 33574] gi|288337437|gb|EFC75792.1| peptide chain release factor 1 [Prevotella buccae D17] gi|315250049|gb|EFU30048.1| peptide chain release factor RF1 [Prevotella buccae ATCC 33574] Length = 370 Score = 209 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 90/354 (25%), Positives = 154/354 (43%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R ++T DP + + L +E + L + + K L ++ Sbjct: 11 LDGLESRFEEVSTLITDPDVIADQQRYVKLTKEYKDLGDIMDVRKRYIACLNAIKESKDI 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + L + + E D+ + +E+ AGAGG E+ Sbjct: 71 LANESDADMKEMAREELATNEDLQPKLEEEIKIALVPKDPEDAKNVQMEIRAGAGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MY ++ + + + + +G G K + G + YG LK E GVHR+ Sbjct: 131 LFAGDLFNMYKKYCDSKGWNLSVTSVSEGAVGGYKEIDFAVSGVDVYGTLKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P D I+E D + DT+R+SGAGGQ+VN +S VR Sbjct: 191 RVPATETQGRMHTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKVESGVR 249 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + + ++++C + R Q KNK +A + L +++ E QK I +I K Sbjct: 250 LRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTFIHDREHQKY--IDDIASRRK 307 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + + G + IR+Y P V D R + GD+ D + A + Sbjct: 308 SLVSTGDRSAKIRTYNF-PQGRVTDHRIGYTTHDLQGFMGGDIQDMIDALTVAE 360 >gi|332716892|ref|YP_004444358.1| peptide chain release factor 1 [Agrobacterium sp. H13-3] gi|325063577|gb|ADY67267.1| peptide chain release factor 1 [Agrobacterium sp. H13-3] Length = 360 Score = 209 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 113/344 (32%), Positives = 178/344 (51%), Gaps = 18/344 (5%) Query: 18 NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 +R + + P L E L+ + ++E + + + L L Sbjct: 11 ELERRFGEIEARMSAGPA----ADVYVKLASEYSELEPVVKKVREYEKAVSEAADLQALL 66 Query: 77 LEEDDCSILQE-TSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 ++ +++ L ++ + + E AD A LE+ AG GG+E+ Sbjct: 67 ADKTTDKDMRDLAEMELPEVEARIGELEKEMQVLLLPKDAADEKSAILEIRAGTGGSEAA 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R+A + +K E L +GE G K I G + LK E GVHR+ Sbjct: 127 LFAGDLFRMYERFASAKGWKVEVLSASEGEAGGYKEIIATISGRGVFSKLKFESGVHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +++ R HTS +++ V P + I++EI D RIDT RASGAGGQHVNTTDSAVR Sbjct: 187 RVPETEASGRIHTSAATVAVLP-EAEDIDVEIRPEDIRIDTMRASGAGGQHVNTTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG++V E+SQH+N+A+A +LR++LY++E QK E K+++G G Sbjct: 246 ITHLPTGLIVTSS-EKSQHQNRAKAMQVLRSRLYDIERQKVESER--SADRKSQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ +++G++D+ + A +A Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLYKLDRMIEGEIDELVDALIA 345 >gi|322411678|gb|EFY02586.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 359 Score = 209 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 94/348 (27%), Positives = 162/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPEVVSDTKRFMALSKEEASTRDTVTTYREYKQVIQAIADAEEM 66 Query: 76 ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + L+E + + + E + L D + LE+ AGG E+ Sbjct: 67 IKDANGDPELEEMAKEELKESKAAKEDYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ + P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLIMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G +D+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEIIDALVMYDQ 350 >gi|332360650|gb|EGJ38459.1| peptide chain release factor RF1 [Streptococcus sanguinis SK49] Length = 359 Score = 209 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 99/348 (28%), Positives = 163/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + L + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKKVLQNITDAEEM 66 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKDASGDADLEEMAKQELKDAKSEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 Q +A LL+MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350 >gi|163867491|ref|YP_001608690.1| peptide chain release factor 1 [Bartonella tribocorum CIP 105476] gi|189039959|sp|A9IMM3|RF1_BART1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|161017137|emb|CAK00695.1| peptide chain release factor 1 [Bartonella tribocorum CIP 105476] Length = 358 Score = 209 bits (531), Expect = 6e-52, Method: Composition-based stats. Identities = 117/349 (33%), Positives = 182/349 (52%), Gaps = 18/349 (5%) Query: 16 WDNAVQRLSFLNTKTE-DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 +R + ++ +P N L E L I+ I+ + + L Sbjct: 9 IKQLEKRFEIIESQMTTNP----NAETYVKLASEYAELQPVIASIRALNALYGEITELET 64 Query: 75 LALEEDDCSILQETSDN-----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 + ++ ++ + ++++ + Q L AD A +E+ AG GG+E Sbjct: 65 IINDKQTDIEMRHLAQEELPSLHKKVEQLEKELQILLLPKDVADEKSAIVEIRAGTGGSE 124 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + ++ L RMY R+A +K E + + +GE G K I G + LK E GVHR Sbjct: 125 AALFSGDLFRMYERYAHAHHWKVEVISLSEGEVGGYKEIIATISGKGVFSKLKYESGVHR 184 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + RI ++ R HTS +++ V P + I+I+I D RIDT RASGAGGQHVNTTDSA Sbjct: 185 VQRIPETETGGRIHTSAATVAVLP-EAEEIDIDIRPEDIRIDTMRASGAGGQHVNTTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG++V Q E+SQH+N+A+A +LRA+L+++E QK E S K+++G G Sbjct: 244 VRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQKVESER--SASRKSQVGSG 300 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +L+GDLD+ + A ++ + Sbjct: 301 DRSERIRTYNF-PQGRVTDHRINLTLYKLDRILEGDLDEIIHALISDHQ 348 >gi|167855181|ref|ZP_02477952.1| peptide chain release factor 2 [Haemophilus parasuis 29755] gi|219871045|ref|YP_002475420.1| peptide chain release factor 2 [Haemophilus parasuis SH0165] gi|167853726|gb|EDS24969.1| peptide chain release factor 2 [Haemophilus parasuis 29755] gi|219691249|gb|ACL32472.1| peptide chain release factor 2 [Haemophilus parasuis SH0165] Length = 248 Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 146/247 (59%), Positives = 189/247 (76%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ D+ D Y+++ AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+K Sbjct: 1 MFSGQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ + G A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP VDD +IEI+ + Sbjct: 61 SATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEVDDDFDIEINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVN T+SAVRITH+P+G+VVQCQ RSQH+NK QA L+AKLYE Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNGRSQHQNKDQAMKQLKAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 +E+ K+ E SK++IGWG QIRSYVL +KDLRT +E + VLDGDLD F Sbjct: 181 MEMMKKNAEKQAMEESKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKF 239 Query: 347 MKATLAI 353 ++A+L Sbjct: 240 IEASLKA 246 >gi|121593273|ref|YP_985169.1| peptide chain release factor 1 [Acidovorax sp. JS42] gi|166223524|sp|A1W4B8|RF1_ACISJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|120605353|gb|ABM41093.1| bacterial peptide chain release factor 1 (bRF-1) [Acidovorax sp. JS42] Length = 367 Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 112/352 (31%), Positives = 175/352 (49%), Gaps = 17/352 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + QRL L+ + ++ + + + RE + Q R D E+ Sbjct: 9 LERYAQRLQELDFLLSREDIMADMQQYRSISREHAEVTQVAGRYARYQQREADLAGAREM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGTESQDW 133 + D + + + + +L + + L D +A++E+ AG GG ES + Sbjct: 69 LEDPD-MAEMAQEEIHAAETELVQLEDELQRLLLPKDPDDERNAFIEIRAGTGGDESALF 127 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN--------AYGWLKGEQ 185 A L RMYTR+A +K E + ++ E G K L I+G + YG LK E Sbjct: 128 AGDLARMYTRYAATVGWKVEVMSANESEIGGYKEVVLRIEGQSGTGPSGSGVYGALKFES 187 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G HR+ R+ ++ R HTS ++ V P D+ I ++ +D RIDT+RASGAGGQH+N Sbjct: 188 GGHRVQRVPATETQGRIHTSACTVAVMPEPDEHQAITLNPADLRIDTFRASGAGGQHINK 247 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVR+ H+PTG+V +CQ RSQH NKA+A +L+A++ E E +R A K Sbjct: 248 TDSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSER--AAKEAALRKGL 305 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IG G +IR+Y P + D R N+ +++GDL + ++A + Sbjct: 306 IGSGDRSDRIRTYNF-PQGRLTDHRINLTLYKLLAIMEGDLGEVLQALQHAR 356 >gi|332366923|gb|EGJ44664.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1059] Length = 359 Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 99/348 (28%), Positives = 163/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + L + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEESSTRDTVTAYREYKKVLQNITDAEEM 66 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 Q +A LL+MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350 >gi|126739408|ref|ZP_01755101.1| peptide chain release factor 1 [Roseobacter sp. SK209-2-6] gi|126719508|gb|EBA16217.1| peptide chain release factor 1 [Roseobacter sp. SK209-2-6] Length = 351 Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 118/344 (34%), Positives = 174/344 (50%), Gaps = 12/344 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +QR +L + + E L RE + I + L D + Sbjct: 7 LEQILQRFQYLEAAMAEG---ASGAEIADLAREYSEIKPVAEQICAYRQLLADLEEAEVM 63 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + +E L+ Q L AD+ A LE+ G GG E+ +A Sbjct: 64 LADPDMKELAEEEIPTLKAALPDAEHALQLALLPKDAADTRPAMLEIRPGTGGDEASLFA 123 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE R +K E +E E GIK + IKG N + +K E GVHR+ R+ Sbjct: 124 GDLLRMYQRYAEARGWKFEVIEEQATELGGIKEVVVHIKGENVFARMKYESGVHRVQRVP 183 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P + ++I I +D RIDT R+SGAGGQHVNTTDSAVRITH Sbjct: 184 VTESGGRIHTSAATVAVLP-EAEDVDIHIDANDLRIDTMRSSGAGGQHVNTTDSAVRITH 242 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV E+SQH+N+ A +L+ +LY+LE Q+ + +++G G + Sbjct: 243 LPTGLVVTSS-EKSQHRNREIAMQVLKTRLYDLERQRIDSER--SADRASQVGSGDRSER 299 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++ GDLD+ + A A + Sbjct: 300 IRTYNF-PQGRMSDHRINLTLYKLDQIMQGDLDEIIDALTADHQ 342 >gi|195953354|ref|YP_002121644.1| peptide chain release factor 1 [Hydrogenobaculum sp. Y04AAS1] gi|229576658|sp|B4U955|RF1_HYDS0 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|195932966|gb|ACG57666.1| peptide chain release factor 1 [Hydrogenobaculum sp. Y04AAS1] Length = 356 Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 120/343 (34%), Positives = 183/343 (53%), Gaps = 8/343 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + Q+ + K + ++ K L ++ + L K+ L D EL Sbjct: 10 IQDIEQKYAQTEEKLASLDITKDADTYKALSKDLKELSYIHELYKDYNKILKDIEDTKEL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134 ++D + ++ +NL L+ E + DS + LE+ AGAGG E+ +A Sbjct: 70 LKDKDLRELAEKELENLNTKLLQKEKELINVLTPKDANDSKNVILEIRAGAGGEEAALFA 129 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE++ +K LE + G K + I+G N Y LK E GVHR+ R+ Sbjct: 130 ADLLRMYQRYAERKGWKFNILEANKTGLGGYKEVIVSIEGKNVYSHLKYESGVHRVQRVP 189 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P D++ + I+ D RI+T+RASGAGGQ+VNTT+SAVRITH Sbjct: 190 ITESGGRIHTSTITVAVLPEADETDVV-INPQDLRIETFRASGAGGQYVNTTESAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 IPTG+ + CQ ERSQ +NK +A +L A+L + ++++E + + K ++G G + Sbjct: 249 IPTGISISCQDERSQLQNKLKAMRILYARLKDFYEKQKKEETD--KERKEQVGTGERSEK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y V D R N+ DVLDGDLDD + + A + Sbjct: 307 IRTYNFS-QNRVTDHRINLTLHKLQDVLDGDLDDIISSLQAKE 348 >gi|221639323|ref|YP_002525585.1| peptide chain release factor 1 [Rhodobacter sphaeroides KD131] gi|254790895|sp|B9KST8|RF1_RHOSK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|221160104|gb|ACM01084.1| Peptide chain release factor 1 [Rhodobacter sphaeroides KD131] Length = 351 Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 115/342 (33%), Positives = 179/342 (52%), Gaps = 12/342 (3%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 V+R FL + E L RE L + I + L D + Sbjct: 9 QIVRRFEFLEARLSAGAA---PAEIAALSREYAELKPVVVEISAYRTALEDLAEAEAMLS 65 Query: 78 EEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 + + ++ ++ L+ + + L AD+ A LE+ G GG E+ +A Sbjct: 66 DPEMRALAEDEIPALRARIPGMEQALRLALLPKDAADARPAILEIRPGTGGEEAALFAGD 125 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 LLRMY R+AE + ++ E L++ E GI+ AT ++G A+ LK E GVHR+ R+ Sbjct: 126 LLRMYQRYAEGQGWRFELLDLAPSELGGIREATARVEGEGAFARLKYESGVHRVQRVPET 185 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 ++ R HTS +++ V P + +++EI +D RIDT R+SGAGGQHVNTTDSAVRITH+P Sbjct: 186 EAQGRIHTSAATVAVLP-EAEEVDLEIPAADLRIDTMRSSGAGGQHVNTTDSAVRITHLP 244 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG++V E+SQH+N+ A +LRA+LY+LE Q+ + K ++G G +IR Sbjct: 245 TGIIVTSS-EKSQHRNREIAMQVLRARLYDLERQRLADAR--SADRKAQVGSGDRSERIR 301 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +Y P + D R N+ + ++ GDL + + A A + Sbjct: 302 TYNF-PQGRMTDHRINLTLYALPQIMAGDLSEVISALTAHDQ 342 >gi|157150598|ref|YP_001450441.1| peptide chain release factor 1 [Streptococcus gordonii str. Challis substr. CH1] gi|172046863|sp|P47850|RF1_STRGC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|157075392|gb|ABV10075.1| peptide chain release factor 1 [Streptococcus gordonii str. Challis substr. CH1] Length = 359 Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 100/348 (28%), Positives = 164/348 (47%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + L + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 Q +A LL+MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350 >gi|77463465|ref|YP_352969.1| peptide chain release factor 1 [Rhodobacter sphaeroides 2.4.1] gi|119361594|sp|Q3J2B6|RF1_RHOS4 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|77387883|gb|ABA79068.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodobacter sphaeroides 2.4.1] Length = 351 Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 115/342 (33%), Positives = 179/342 (52%), Gaps = 12/342 (3%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 V+R FL + E L RE L + I + L D + Sbjct: 9 QIVRRFEFLEARLSAGAA---PAEIAALSREYAELKPVVVEISAYRTALEDLAEAEAMLS 65 Query: 78 EEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 + + ++ ++ L+ + + L AD+ A LE+ G GG E+ +A Sbjct: 66 DPEMRALAEDEIPALRARIPGMEQALRLALLPKDAADARPAILEIRPGTGGEEAALFAGD 125 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 LLRMY R+AE + ++ E L++ E GI+ AT ++G A+ LK E GVHR+ R+ Sbjct: 126 LLRMYQRYAEGQGWRFELLDLAPSELGGIREATARVEGEGAFARLKYESGVHRVQRVPET 185 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 ++ R HTS +++ V P + +++EI +D RIDT R+SGAGGQHVNTTDSAVRITH+P Sbjct: 186 EAQGRIHTSAATVAVLP-EAEEVDLEIPAADIRIDTMRSSGAGGQHVNTTDSAVRITHLP 244 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG++V E+SQH+N+ A +LRA+LY+LE Q+ + K ++G G +IR Sbjct: 245 TGIIVTSS-EKSQHRNREIAMQVLRARLYDLERQRLADAR--SADRKAQVGSGDRSERIR 301 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +Y P + D R N+ + ++ GDL + + A A + Sbjct: 302 TYNF-PQGRMTDHRINLTLYALPQIMAGDLSEVISALTAHDQ 342 >gi|163759877|ref|ZP_02166961.1| peptide chain release factor 1 [Hoeflea phototrophica DFL-43] gi|162282835|gb|EDQ33122.1| peptide chain release factor 1 [Hoeflea phototrophica DFL-43] Length = 361 Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats. Identities = 114/346 (32%), Positives = 179/346 (51%), Gaps = 16/346 (4%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 +R + + + L E L + I+ + L + L + Sbjct: 11 ELERRFGEVEARMAAG---PDPEAYVKLASEYSDLQPLVDQIRALDAALAERSDLEAMLQ 67 Query: 78 EEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + + +++ +++ R E + L AD A LE+ AG GG+E+ Sbjct: 68 DTANDKEMRDLAESELRSTKVRIGELEEQIEIMLLPKDAADERSAILEIRAGTGGSEAAL 127 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY R+A RK+K E L +GE G K I G + LK E GVHR+ R Sbjct: 128 FAGDLFRMYERYASSRKWKVEVLSASEGEAGGYKEIIATISGKGVFARLKFESGVHRVQR 187 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS +++ V P + I+IE+ D RIDT RASGAGGQHVNTTDSAVRI Sbjct: 188 VPETESGGRIHTSAATVAVLP-EAEDIDIEVRSEDIRIDTMRASGAGGQHVNTTDSAVRI 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV E+SQH+N+A+A +LRA+LY++E Q+ ++ + ++++G G Sbjct: 247 THLPTGLVVTSS-EKSQHQNRARAMQVLRARLYDMERQRADDERSQS--RRSQVGSGDRS 303 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ ++ G++D+ + A ++ + Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTLYKLDRMMMGEIDEVVDALISDHQ 348 >gi|254526537|ref|ZP_05138589.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT 9202] gi|221537961|gb|EEE40414.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT 9202] Length = 364 Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats. Identities = 101/341 (29%), Positives = 168/341 (49%), Gaps = 13/341 (3%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 L + DP + + + + + RER L+ + ++ D + L E + Sbjct: 17 FENLEVQLADPDIANDPKKLESIARERSKLEPLVIDFNKLLDTDKEIEDSKNLLKENRND 76 Query: 83 SILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTESQDWANML 137 ++ + I E + + + D LE+ AGAGG E+ WA L Sbjct: 77 KEMESLINEELIILEEFKNELIQKTTIALLPKDPRDERSVMLEIRAGAGGNEACIWAGDL 136 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY R+ +K + +++ + + G K + +KG + Y LK E GVHR+ R+ + Sbjct: 137 ARMYERYGQKIGWSVKSVSASESDMGGFKELVISVKGDSVYSQLKFEAGVHRVQRVPATE 196 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 S R HTS +++ V P D +E++I +D I T R+ GAGGQ+VN ++A+ + H PT Sbjct: 197 SQGRVHTSTATVAVMP-EADPVEVKIDPTDLEIGTARSGGAGGQNVNKVETAIDLLHKPT 255 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314 G+ V C QERSQ +N+ +A +LRAKLYE++L+ E A +++G G +IR+ Sbjct: 256 GIRVFCTQERSQLQNRERAMEILRAKLYEIQLK--EANAKERSQRLSQVGTGDRSEKIRT 313 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 Y + D R S +L G LD+ + A +A ++ Sbjct: 314 YNFKD-NRTTDHRLG-SNFSLEPILAGQLDEVINACIAQEQ 352 >gi|242309130|ref|ZP_04808285.1| peptide chain release factor 1 [Helicobacter pullorum MIT 98-5489] gi|239524171|gb|EEQ64037.1| peptide chain release factor 1 [Helicobacter pullorum MIT 98-5489] Length = 356 Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats. Identities = 107/341 (31%), Positives = 176/341 (51%), Gaps = 9/341 (2%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 ++R ++ P + ++ L +E+ L+ + K+ L L ++ Sbjct: 10 IERYEEISALLIKPEILNDIKRITELSKEQSDLEKLVQKSKQYLQNLQSIEENKSLLDDK 69 Query: 80 DDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 + + +E + + + L D + YLE+ AG GG E+ + L Sbjct: 70 ELGDLAKEEIKEAEAQNQELESEIKVLLLPKDPNDEKNIYLELRAGTGGDEAGIFVGDLF 129 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 + Y R+AE + +K E + ++ G K LIKG AY LK E G HR+ R+ +S Sbjct: 130 KAYVRYAESKGWKVEIISSNENNFGGYKEVIALIKGKGAYSRLKYEGGTHRVQRVPETES 189 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R HTS ++ + P D +E+ I+ +D +I+ +RA G GGQ VNTTDSAVRITHIPTG Sbjct: 190 QGRIHTSAITVAIMP-EVDDVEVVINPNDLKIEVFRAGGHGGQCVNTTDSAVRITHIPTG 248 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315 + V Q E+SQHKNK +A +L+A++YE EL+ + E E+ K+++G G +IR+Y Sbjct: 249 ISVSMQDEKSQHKNKDKALKILKARIYEAELEAQME--QNAEARKSQVGSGDRSERIRTY 306 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 P + D R + S +++ +GDLD ++ +A + Sbjct: 307 NY-PQNRLSDHRIGLTLYSLEEIMLNGDLDQVIEPIIAYFQ 346 >gi|163850388|ref|YP_001638431.1| peptide chain release factor 1 [Methylobacterium extorquens PA1] gi|218528948|ref|YP_002419764.1| peptide chain release factor 1 [Methylobacterium chloromethanicum CM4] gi|240137464|ref|YP_002961935.1| peptide chain release factor RF-1 [Methylobacterium extorquens AM1] gi|254559642|ref|YP_003066737.1| peptide chain release factor RF-1 [Methylobacterium extorquens DM4] gi|226739112|sp|A9W1A4|RF1_METEP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790888|sp|B7L246|RF1_METC4 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|163661993|gb|ABY29360.1| peptide chain release factor 1 [Methylobacterium extorquens PA1] gi|218521251|gb|ACK81836.1| peptide chain release factor 1 [Methylobacterium chloromethanicum CM4] gi|240007432|gb|ACS38658.1| peptide chain release factor RF-1 [Methylobacterium extorquens AM1] gi|254266920|emb|CAX22719.1| peptide chain release factor RF-1 [Methylobacterium extorquens DM4] Length = 361 Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats. Identities = 110/349 (31%), Positives = 176/349 (50%), Gaps = 15/349 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + R + + D + L RE LD ++ I + + + + Sbjct: 9 LDAILARHDIVTAQLADGS--ADAGSIVQLSRELSELDGVVAAIHHYRLAEANLAGIRAM 66 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130 E ++ + + E + Q L AD A LE+ AG GG E+ Sbjct: 67 IDEPGGDPEMRALAAEEKPEAEEALEQAHRALQLILLPKDAADEKSAILEIRAGTGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+AE + ++ E + +G G + +KG + + LK E G HR+ Sbjct: 127 ALFAGDLFRMYARYAESKGWRVEVISESEGTAGGYREVVAEVKGRSVFSRLKFESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + ++I ++E+D +IDT RA GAGGQHVN T+SA+ Sbjct: 187 QRVPDTETQGRIHTSAATVAVLP-EAEEVDIVVNEADLKIDTMRAQGAGGQHVNKTESAI 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTGVVV Q+ERSQHKN+A+A ++LR+KL++ E ++ + K ++G G Sbjct: 246 RITHIPTGVVVFVQEERSQHKNRARAMSLLRSKLFDAERTAKD--SARAADRKAQVGSGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 +IR+Y P V D R N+ +V+ G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQGRVTDHRINLTLYKLEEVMAGQALDEVIDALVTEHQ 351 >gi|89070966|ref|ZP_01158192.1| peptide chain release factor 1 [Oceanicola granulosus HTCC2516] gi|89043473|gb|EAR49687.1| peptide chain release factor 1 [Oceanicola granulosus HTCC2516] Length = 351 Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats. Identities = 110/346 (31%), Positives = 175/346 (50%), Gaps = 16/346 (4%) Query: 16 WDNAVQRLSFLNTKTED--PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D V R +L + + P E + RE L + I + + Sbjct: 7 LDQIVARQQYLEARMAEGAPG-----AEMIAIAREYSDLKPVVETIARYRALTAELEEAQ 61 Query: 74 ELALEEDDCSILQETS-DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + E + + +E + + + + L AD+ A +E+ G GG E+ Sbjct: 62 AMLAEPEMRGLAEEEIARLKEALPEAEQALRLALLPRDAADARPAMIEIRPGTGGEEAAL 121 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A LLRMY R+A+ + + E ++ E GI+ T + G + LK E GVHR+ R Sbjct: 122 FAADLLRMYQRYADAKGWSFEIIDEQATELGGIRELTARVAGDGVFARLKFESGVHRVQR 181 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS +++ V P ++I+I+ +D RIDT RASGAGGQHVNTTDSAVRI Sbjct: 182 VPETESGGRIHTSAATVAVLP-EAADVDIDIAPADIRIDTMRASGAGGQHVNTTDSAVRI 240 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV E+SQH+N+ A +L+ +L+++E Q+ + K ++G G Sbjct: 241 THLPTGLVVTSS-EKSQHRNREIAMQVLKTRLFDMERQR--ASDERSAARKAQVGSGDRS 297 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ ++L GDLD+ + A +A + Sbjct: 298 ERIRTYNF-PQGRMTDHRINLTLYRLEEILGGDLDETIDALIAETQ 342 >gi|119511140|ref|ZP_01630258.1| peptide chain release factor 2 [Nodularia spumigena CCY9414] gi|119464235|gb|EAW45154.1| peptide chain release factor 2 [Nodularia spumigena CCY9414] Length = 288 Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats. Identities = 130/255 (50%), Positives = 177/255 (69%) Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159 + + + LLSG D+ A L ++AGAGGT++QDWA ML+RMYTRWAE +K E + Sbjct: 25 DQWELQQLLSGPYDAEGAVLTINAGAGGTDAQDWAFMLMRMYTRWAEDHGYKVSLAEESE 84 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 G+EAGIKSATL I G AYG+L+ E G HRLVRISP+++N +R TSF+ + + P +D S+ Sbjct: 85 GDEAGIKSATLEITGRYAYGYLRSETGTHRLVRISPFNANGKRQTSFAGVEIMPQLDHSV 144 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 ++EI E D I T RA G GGQ+VN ++AVRI H+PTG+ V+C +ERSQ +NK +A Sbjct: 145 QLEIPEKDLEITTSRAGGKGGQNVNKVETAVRIVHLPTGIAVRCTEERSQLQNKDKALAR 204 Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 L+AKL + +++ + E WG QIR+YV PYQMVKDLRTN+E T+ SDV+ Sbjct: 205 LKAKLLVIAREQKAQEVAEIRGDMVEASWGNQIRNYVFHPYQMVKDLRTNVETTAISDVM 264 Query: 340 DGDLDDFMKATLAIK 354 DGDLD F++A L + Sbjct: 265 DGDLDSFIQAYLRQE 279 >gi|134102728|ref|YP_001108389.1| putative peptide chain release factor 1 [Saccharopolyspora erythraea NRRL 2338] gi|291007815|ref|ZP_06565788.1| putative peptide chain release factor 1 [Saccharopolyspora erythraea NRRL 2338] gi|133915351|emb|CAM05464.1| putative peptide chain release factor 1 [Saccharopolyspora erythraea NRRL 2338] Length = 357 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 119/348 (34%), Positives = 177/348 (50%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + + L + DP + + A+ L R L + KE+ D EL Sbjct: 6 LDGLLAEYAELERRLADPEVHADQAGARKLGRRYAELTPVVRCSKELDQARSDLATAREL 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A E+ + E+ + D++D LEV +G GG ES +A Sbjct: 66 ADEDPAFAEEAESLAESVPALEAKLTELLL--PRDPHDASDVLLEVKSGEGGEESALFAG 123 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVH 188 LLRMY R+AE++ ++TE L+ + + G K AT+ +K + LK E GVH Sbjct: 124 DLLRMYLRFAERQGWRTEILDATESDLGGYKDATVAVKTKAGDTGPDGVWSKLKFEGGVH 183 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS + + + + +E+E+ E D RID YR+SG GGQ VNTTDS Sbjct: 184 RVQRVPVTESQGRVHTSAAGV-LVYPEPEEVEVEVDEKDLRIDVYRSSGPGGQSVNTTDS 242 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307 AVRITH+PTG+VV CQ E+SQ +NK +A +LRA+L L ++ E A+ S+ + Sbjct: 243 AVRITHLPTGIVVSCQNEKSQLQNKIRAIQVLRARLQALAEEEAEREASETRRSQVRTVD 302 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N + + VLDGDLD + A +A + Sbjct: 303 RSERIRTYNF-PENRISDHRVNYKAYNLDQVLDGDLDGVLGALVAADR 349 >gi|113476549|ref|YP_722610.1| peptide chain release factor 1 [Trichodesmium erythraeum IMS101] gi|119361636|sp|Q110D7|RF1_TRIEI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|110167597|gb|ABG52137.1| bacterial peptide chain release factor 1 (bRF-1) [Trichodesmium erythraeum IMS101] Length = 369 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 105/348 (30%), Positives = 181/348 (52%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + Q + L + DP + ++ E + L + R L+ ++ E ++ + E+ Sbjct: 10 LKSVEQTYNELTLRLADPDVAKDPSEFQKLAKARSSLEEVVNCYVEWKNAQEELADAKEI 69 Query: 76 ALE-----EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E E E D +++ + L D + LE+ AG GG E+ Sbjct: 70 LKEAVGDLEMQEMAKVEVEDLEAKLESLENQMKIALLPRDPNDDKNIMLEIRAGTGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L+RMY+R++E + +K L + G K A L IKG + Y LK E GVHR+ Sbjct: 130 SIWAGDLVRMYSRYSENQSWKVSLLSESLADMGGFKEAILEIKGDHVYSKLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ + P D +E+EI + D + T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPVTEAGGRVHTSTATVAIMP-EVDDVEVEIDQKDIELSTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ + C QERSQ +N+ +A +LRAKLYE++LQ+++ + ++++G G Sbjct: 249 DLFHKPTGIRIFCTQERSQLQNRERAMQILRAKLYEIKLQEQQAEVSSI--RRSQVGTGS 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D R N + S +L+GD+++ ++A + + Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLN-QNFSLVPLLEGDIENVIQACITQDQ 352 >gi|307706536|ref|ZP_07643343.1| peptide chain release factor 1 [Streptococcus mitis SK321] gi|307617991|gb|EFN97151.1| peptide chain release factor 1 [Streptococcus mitis SK321] Length = 359 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 97/348 (27%), Positives = 161/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + L + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASSRDTVTAYREYKQVLQNIVDAEEM 66 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E G K ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLIMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E ++ D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDLDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350 >gi|293365352|ref|ZP_06612069.1| peptide chain release factor RF1 [Streptococcus oralis ATCC 35037] gi|307703894|ref|ZP_07640835.1| peptide chain release factor 1 [Streptococcus oralis ATCC 35037] gi|291316802|gb|EFE57238.1| peptide chain release factor RF1 [Streptococcus oralis ATCC 35037] gi|307622729|gb|EFO01725.1| peptide chain release factor 1 [Streptococcus oralis ATCC 35037] Length = 359 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 97/348 (27%), Positives = 161/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + L + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKESGGDVDLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E G K ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ + P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLIMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350 >gi|323351595|ref|ZP_08087249.1| peptide chain release factor RF1 [Streptococcus sanguinis VMC66] gi|322122081|gb|EFX93807.1| peptide chain release factor RF1 [Streptococcus sanguinis VMC66] gi|324992933|gb|EGC24853.1| peptide chain release factor RF1 [Streptococcus sanguinis SK405] gi|325687437|gb|EGD29458.1| peptide chain release factor RF1 [Streptococcus sanguinis SK72] gi|325694524|gb|EGD36433.1| peptide chain release factor RF1 [Streptococcus sanguinis SK150] gi|325696481|gb|EGD38371.1| peptide chain release factor RF1 [Streptococcus sanguinis SK160] gi|327462229|gb|EGF08556.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1] gi|327470059|gb|EGF15523.1| peptide chain release factor RF1 [Streptococcus sanguinis SK330] gi|327474249|gb|EGF19656.1| peptide chain release factor RF1 [Streptococcus sanguinis SK408] gi|327489584|gb|EGF21376.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1058] Length = 359 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 99/348 (28%), Positives = 163/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + L + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKKVLQNITDAEEM 66 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 Q +A LL+MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350 >gi|86132255|ref|ZP_01050850.1| peptide chain release factor 1 [Dokdonia donghaensis MED134] gi|85817174|gb|EAQ38357.1| peptide chain release factor 1 [Dokdonia donghaensis MED134] Length = 359 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 97/343 (28%), Positives = 167/343 (48%), Gaps = 12/343 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 QR ++ P + + L +E L + +E + + E+ Sbjct: 5 LQIVKQRFDEVSDLIIQPDIISDQKRYVSLNKEYSDLKALMDVREEYIELTDNFKEAEEI 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 + D +++ + K + + + D+ + +E+ AG GG E+ Sbjct: 65 IADGSDAEMVEMAKMQYEEAKSGIPELEEKIRMMLIPKDPEDAKNVVVEIRAGTGGDEAS 124 Query: 132 DWANMLLRMYTRWAEKR-KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMYT++ + +K ++ +G G K I G + YG +K E GVHR+ Sbjct: 125 IFAGDLYRMYTKYVDSVPGWKHSTVDYSEGTSGGFKEIQFEITGQDVYGTMKFEAGVHRV 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P ++ I D R+D + +SG GGQ VNTT SAV Sbjct: 185 QRVPQTETQGRVHTSAATVMVLPEAEEFDVQ-IEPKDVRVDFFCSSGPGGQSVNTTYSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+THIPTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL K++E +++ G Sbjct: 244 RLTHIPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDLELAKKQEE--DAAKRNSQVSSGD 301 Query: 311 Q---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 + IR+Y P V D R + ++++GD+ ++ Sbjct: 302 RSAKIRTYNY-PQGRVTDHRIGLTLYDLQNIINGDIQKILEEL 343 >gi|332529974|ref|ZP_08405924.1| peptide chain release factor 1 [Hylemonella gracilis ATCC 19624] gi|332040447|gb|EGI76823.1| peptide chain release factor 1 [Hylemonella gracilis ATCC 19624] Length = 369 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 125/351 (35%), Positives = 183/351 (52%), Gaps = 15/351 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + QRL LN + ++ + L RE + + + R D E+ Sbjct: 9 LERYAQRLDELNFLLSREDIMGDMKQFLALSREHNEVTAIAGRYAQYRQRETDLSSAREM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 E D I QE + +E + Q L D+ +A+LE+ AG GG ES +A Sbjct: 69 LAEPDMTDIAQEEITAAMADLVRLEDELQRLLLPKDPDDARNAFLEIRAGTGGDESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN--------AYGWLKGEQG 186 LLRMYTR+A++R +KTE + E G K L I G N YG L+ E G Sbjct: 129 ADLLRMYTRYADQRGWKTEIMSESPSELGGYKEVVLRIDGGNAESPSGLGVYGELRFESG 188 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ ++ R HTS ++ V P D+ ++I+ ++ RIDT+RASGAGGQH+N T Sbjct: 189 GHRVQRVPATETQGRIHTSACTVAVLPEPDEQEAVQINPAELRIDTFRASGAGGQHINKT 248 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PTG+V +CQ +RSQH+NKA+A +L A++ E E +R A + + I Sbjct: 249 DSAVRITHLPTGIVAECQDDRSQHRNKAKALQVLAARIQEKERSER--AAKDAATRRGLI 306 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 G G +IR+Y P + D R N+ S V++G LDD ++A + Sbjct: 307 GSGDRSDRIRTYNF-PQGRLTDHRINLTLYKLSQVMEGALDDVVQALRHAR 356 >gi|289706369|ref|ZP_06502727.1| peptide chain release factor 1 [Micrococcus luteus SK58] gi|289556864|gb|EFD50197.1| peptide chain release factor 1 [Micrococcus luteus SK58] Length = 369 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 109/358 (30%), Positives = 171/358 (47%), Gaps = 17/358 (4%) Query: 13 LFD-------WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 +FD D + L + DP + Q+ A+ L R L ++ + Sbjct: 1 MFDSEQRREAVDRLLAEHRELTARLSDPAVHQDPALARRLNRRFAELGAVVTAHRAWSAA 60 Query: 66 LCDNLILLELALEEDDCSILQETSD--NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + + ELA DD + E + + D+ D LE+ Sbjct: 61 VEELADARELAAAGDDDAAAFAAEVPGLEAAEAEAAERLRRLLIPRDPDDARDVILEIKG 120 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI------KGPNA 177 G GG E+ +A LLRMY R+AE R +KTE L + G K + + Sbjct: 121 GEGGEEAALFAGDLLRMYLRYAESRGWKTEVLSATHSDLGGYKDVHVAVRGSAADPADGV 180 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 Y LK E GVHR+ R+ +S R HTS + + V P VD E+ + +D ++D +R+SG Sbjct: 181 YARLKFEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEVDAPDEVHLDPNDLKVDVFRSSG 240 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQ VNTTDSAVR+TH+PTG+VV Q E+SQ +N+ A +LR++L E + +++ + Sbjct: 241 PGGQSVNTTDSAVRLTHLPTGIVVSMQNEKSQIQNREAALRVLRSRLLERQRAEQDAEDS 300 Query: 298 IGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +++ + +IR+Y P + D RT + + VLDGDL+ + + LA+ Sbjct: 301 AARAAQVRTMDRSERIRTYNF-PENRIADHRTGYKAHNLDAVLDGDLEAVIASCLALD 357 >gi|322389535|ref|ZP_08063086.1| peptide chain release factor RF1 [Streptococcus parasanguinis ATCC 903] gi|321143810|gb|EFX39237.1| peptide chain release factor RF1 [Streptococcus parasanguinis ATCC 903] Length = 359 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 101/348 (29%), Positives = 164/348 (47%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + L + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKEAGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 Q +A LL+MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D RID Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350 >gi|49473852|ref|YP_031894.1| peptide chain release factor 1 [Bartonella quintana str. Toulouse] gi|61214617|sp|Q6G0R0|RF1_BARQU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|49239355|emb|CAF25688.1| Peptide chain release factor 1 [Bartonella quintana str. Toulouse] Length = 359 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 113/344 (32%), Positives = 180/344 (52%), Gaps = 18/344 (5%) Query: 18 NAVQRLSFLNTKTE-DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 +R + ++ +P + L E L ++ I+ + + L + Sbjct: 11 QLEKRFEIIESQMAKNP----DSGTYVKLASEYADLQPIVTSIRTLNALSIEITELETII 66 Query: 77 LEEDDCSILQETSDN-----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ++ ++ + Q+++ + Q L D A +E+ AG GG+E+ Sbjct: 67 SDKLTDVEMRNLAQEELPPLFQKMEKLEKELQILLLPKDITDEKSAIIEIRAGTGGSEAA 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + L RMY R+A +K E + +++GE G K I G + LK E GVHR+ Sbjct: 127 LFVGDLFRMYERYANAYNWKVEVISLNEGEVGGYKEIIATISGKGVFSKLKFESGVHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +++ R HTS +++ V P + I+IEI D RIDT RASGAGGQHVNTTDSAVR Sbjct: 187 RVPETETSGRIHTSAATVAVLP-EAEEIDIEIRPEDIRIDTMRASGAGGQHVNTTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIPTG++V Q E+SQH+N+A+A +LRA+L+++E +K + S K ++G G Sbjct: 246 ITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIEQKK--AESERSASRKNQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ +L+GDLD+ + A ++ Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLYKLDRILEGDLDELINALIS 345 >gi|126663551|ref|ZP_01734548.1| peptide chain release factor 1 [Flavobacteria bacterium BAL38] gi|126624499|gb|EAZ95190.1| peptide chain release factor 1 [Flavobacteria bacterium BAL38] Length = 357 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 101/346 (29%), Positives = 168/346 (48%), Gaps = 12/346 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D QR ++ P + + L +E + L + +E + Sbjct: 1 MLDRLQYVKQRFDEISDLIIQPDVIADQKRYVQLNKEYKDLKGLVEKREEYIALDGNIKE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAGG 127 E+ + D +++ L K + + E D+ + +E+ AG GG Sbjct: 61 ANEIIADGSDAEMVEMAKMQLDEAKDRLPQLEEEIKFMLIPKDPEDAKNVMVEIRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMYT++ E R ++T ++I +G G K + G + YG LK E GV Sbjct: 121 DEASIFAGDLFRMYTKYCEARGWRTSVVDISEGTSGGFKEVIFEVTGEDVYGTLKFEAGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS +++ V P ++ I +D R+D + +SG GGQ VNTT Sbjct: 181 HRVQRVPQTETQGRVHTSAATVMVLPEAEEFDVQ-IDMNDVRVDFFCSSGPGGQSVNTTK 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPTG+V QCQ ++SQHKNK +A ++LR++LYE EL ++ +++ Sbjct: 240 SAVRLTHIPTGLVAQCQDQKSQHKNKDKALDVLRSRLYEKELAIKQAE--DATKRSSQVS 297 Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G + IR+Y V D R ++ V++G + F+ Sbjct: 298 SGDRSAKIRTYNYS-QGRVTDHRIGLDVFDMDGVMNGKIQKFVDEL 342 >gi|22298070|ref|NP_681317.1| peptide chain release factor 2 [Thermosynechococcus elongatus BP-1] gi|22294248|dbj|BAC08079.1| peptide chain release factor 2 [Thermosynechococcus elongatus BP-1] Length = 290 Score = 208 bits (530), Expect = 8e-52, Method: Composition-based stats. Identities = 131/255 (51%), Positives = 180/255 (70%) Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159 + E LLSG D N+A + ++AGAGGT++QDWA MLLRMYTRWAE+ ++T E+ + Sbjct: 32 NRWELEQLLSGPYDKNNAIVTINAGAGGTDAQDWAEMLLRMYTRWAERHGYQTHLAELSE 91 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 GEEAGIKSATL I+G AYG+L+ E+G HRLVRISP+++N +R TSF+ + V P +D S+ Sbjct: 92 GEEAGIKSATLEIRGRYAYGYLRSEKGTHRLVRISPFNANGKRQTSFAGVDVMPELDQSV 151 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 +EI ESD I T R+ G GGQ+VN ++AVRI H PTG+ V+C QERSQ +NK +A + Sbjct: 152 TVEIPESDLEITTSRSGGKGGQNVNKVETAVRIVHKPTGLAVRCTQERSQLQNKEKALAI 211 Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 L+AKL + +++ + E WG QIR+YV PYQ+VKDLRT +E T+ DV+ Sbjct: 212 LKAKLLVIAQEQKAKEIADIRGEAVEAAWGNQIRNYVFHPYQLVKDLRTEVETTAIQDVM 271 Query: 340 DGDLDDFMKATLAIK 354 DG+LD F++A L + Sbjct: 272 DGNLDPFIQAYLRQQ 286 >gi|330807738|ref|YP_004352200.1| peptide chain release factor 2 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375846|gb|AEA67196.1| Putative Peptide chain release factor 2 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 293 Score = 208 bits (530), Expect = 9e-52, Method: Composition-based stats. Identities = 164/290 (56%), Positives = 212/290 (73%), Gaps = 1/290 (0%) Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D LL++A+EE+D + + L R+ + +F + SGE D N+AYL++ A Sbjct: 3 SGLADCRDLLDMAVEENDEGAVGDVVAELTRLDENLAKLEFRRMFSGEMDMNNAYLDIQA 62 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTE+QDWAN+LLRMY RWA+KR F +E+ GE AGIK AT+ IKG A+GWL+ Sbjct: 63 GSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRT 122 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEIEI+ +D RIDTYR+SGAGGQHV Sbjct: 123 EIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIEINPADLRIDTYRSSGAGGQHV 182 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSAVRITH+PT VV CQ ERSQH NK A MLRA+LYE E+QKR + E +K Sbjct: 183 NTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTK 242 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 ++IGWG QIRSYVL +KDLRT+IE++ VLDGD+D+++ A+L Sbjct: 243 SDIGWGHQIRSYVLD-ASRIKDLRTSIERSDCDKVLDGDIDEYLIASLKQ 291 >gi|300775397|ref|ZP_07085259.1| peptide chain release factor RF1 [Chryseobacterium gleum ATCC 35910] gi|300506137|gb|EFK37273.1| peptide chain release factor RF1 [Chryseobacterium gleum ATCC 35910] Length = 361 Score = 208 bits (530), Expect = 9e-52, Method: Composition-based stats. Identities = 92/346 (26%), Positives = 168/346 (48%), Gaps = 12/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + QR + + P + + L +E L + + + L E+ Sbjct: 9 LEAIKQRYNEVADLIIQPDVISDQKRYSSLNKEYSDLGKIVRVYDQYKGALDSIAESEEI 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 + D ++ + + ++ + E AD + +E+ AG GG E+ Sbjct: 69 IADGSDRDLVDLAKEEKLEAQAKIPGLEEELKVLLIPKDPADDKNVIVELRAGTGGDEAA 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + + RMYT + + + ++ E + ++ + G K + ++G YG +K E GVHR+ Sbjct: 129 IFVEDIYRMYTMYFKAKGWRHEVTDSNEAAK-GYKELIMKVEGEGVYGIMKFESGVHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS ++ V P + +++EI+ +D + T R+ GAGGQ+VN ++ V+ Sbjct: 188 RVPETESQGRVHTSAITVAVLP-EAEEVDVEINPADIEMQTSRSGGAGGQNVNKVETKVQ 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +TH P+G+VV CQQ RSQ N+ A MLRAKLY+++LQ+ + +I KT + G + Sbjct: 247 LTHKPSGLVVVCQQARSQLANRELAMEMLRAKLYDIKLQEVQ--GDIAAQRKTMVSTGDR 304 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 I++Y P V D R N + ++GD+ + + A + + Sbjct: 305 SAKIKTYNY-PQGRVTDHRINKSMYNLDAYMNGDISEMIDAVIMAE 349 >gi|332712139|ref|ZP_08432067.1| bacterial peptide chain release factor 1 [Lyngbya majuscula 3L] gi|332348945|gb|EGJ28557.1| bacterial peptide chain release factor 1 [Lyngbya majuscula 3L] Length = 370 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 101/348 (29%), Positives = 181/348 (52%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72 ++ Q L + DP + + E + + + R L+ ++ + D + Sbjct: 10 LNSVEQTYHELTRRLADPDIATDPNELQRVAKARASLEEVVATYDNWKKTQEDLAGARQI 69 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGTES 130 L+ + E + + + K+E ++ + L D + LE+ AG GG E+ Sbjct: 70 LKESTGEPEMQEMAALEVEELQTKVEHLERELKILLLPKDPNDEKNIMLEIRAGTGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L+RMY+R++E + ++ + L + G K A L I+G Y LK E GVHR+ Sbjct: 130 SIWAGDLVRMYSRYSESQNWRVKLLSESLADMGGFKEAILEIQGEQVYSKLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P D +++EI + I T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPVTEAGGRVHTSTATVAVMP-EVDEVDVEIDPKEIEISTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ + C +ERSQ +N+ +A +LRAKLYE++LQ+++E + + ++G G Sbjct: 249 DLYHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEIKLQEQQE--AVTSMRRAQVGTGA 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D R + S + +L+GDL+ ++A ++ + Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLG-QNYSLAPLLEGDLEGLIQACISQDQ 352 >gi|257464973|ref|ZP_05629344.1| peptide chain release factor 2 [Actinobacillus minor 202] gi|257450633|gb|EEV24676.1| peptide chain release factor 2 [Actinobacillus minor 202] Length = 248 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 145/247 (58%), Positives = 188/247 (76%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ D+ D Y+++ AG+GGTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+K Sbjct: 1 MFSGQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ + G A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP VD+ I IE++ + Sbjct: 61 SATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEVDEDINIEVNPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVN T+SAVRITHIP+ +VVQCQ RSQH+NK QA L+AKLYE Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHIPSCIVVQCQNGRSQHQNKDQAMKQLKAKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 +E+ K+ E SK++IGWG QIRSYVL +KDLRT +E + VLDGDLD F Sbjct: 181 MEMMKQNAEKQAMEESKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKF 239 Query: 347 MKATLAI 353 ++A+L Sbjct: 240 IEASLKA 246 >gi|323136601|ref|ZP_08071682.1| peptide chain release factor 1 [Methylocystis sp. ATCC 49242] gi|322397918|gb|EFY00439.1| peptide chain release factor 1 [Methylocystis sp. ATCC 49242] Length = 356 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 114/343 (33%), Positives = 177/343 (51%), Gaps = 15/343 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R + K + L RER LD+ + I+ +D + L + Sbjct: 7 LDLILRRYDEIGEKLAGG---ADGQTFVALSRERATLDDVVDAIRAWRDAQREVDDLAAM 63 Query: 76 ALEEDDCSILQ-----ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + ++ ET ++++ + L EAD LEV AG GG E+ Sbjct: 64 LADSSLDPEMRALAESETDGAREKLEAAANTLRLALLPKDEADEKGVILEVRAGTGGDEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L R Y ++A + ++ E + G G K I G YG LK E GVHR+ Sbjct: 124 ALFAGDLFRAYQKYAALKGWRVELVSESPGALGGFKEIVAEIIGRGVYGRLKFESGVHRV 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + ++I+I E D +IDT RA GAGGQHVN T+SA+ Sbjct: 184 QRVPETETQGRIHTSAATVAVLPQ-AEDVDIDIDEKDLQIDTMRAQGAGGQHVNKTESAI 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIP+G+VV Q+ERSQH+NKA+A N+LR++LY+ E Q+ ++ + K ++G G Sbjct: 243 RITHIPSGIVVMMQEERSQHRNKAKAMNVLRSRLYDAERQRLDKER--SDDRKQQVGSGD 300 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R N+ V++G+ D+ + A Sbjct: 301 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGEFDEIIDAL 342 >gi|21910335|ref|NP_664603.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS315] gi|28895910|ref|NP_802260.1| peptide chain release factor 1 [Streptococcus pyogenes SSI-1] gi|25091126|sp|Q8K7I2|RF1_STRP3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|21904531|gb|AAM79406.1| putative peptide chain release factor 1 [Streptococcus pyogenes MGAS315] gi|28811160|dbj|BAC64093.1| putative peptide chain release factor 1 [Streptococcus pyogenes SSI-1] Length = 359 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 97/348 (27%), Positives = 162/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L RE + ++ +E + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQTISDAEEM 66 Query: 76 ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + L+E + + + E + L D + LE+ AGG E+ Sbjct: 67 IKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D RID Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+ HIPTG+ V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ +G G Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G +D+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQ 350 >gi|110635328|ref|YP_675536.1| peptide chain release factor 1 [Mesorhizobium sp. BNC1] gi|119361558|sp|Q11E04|RF1_MESSB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|110286312|gb|ABG64371.1| bacterial peptide chain release factor 1 (bRF-1) [Chelativorans sp. BNC1] Length = 359 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 113/348 (32%), Positives = 178/348 (51%), Gaps = 18/348 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R + T+ P L E L + I+ ++ + L + Sbjct: 10 DQVLKRFELIETQMAAGPS----PDAYVKLASEYSELQEVANSIRALRKAEAELEDLDTM 65 Query: 76 -----ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + + R++ + Q L EAD +A LE+ AG GG E+ Sbjct: 66 LADKSIDREIRELAEIDREEVESRVEDMQQKLQVLLLPKDEADEKNAILEIRAGTGGDEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A +R ++ E + +GE G K + G + LK E GVHR+ Sbjct: 126 ALFAGDLFRMYERYASERGWRVEVVSASEGEAGGYKEIIASVTGRGVFSRLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + I+++I D RIDT RASGAGGQHVNTTDSAV Sbjct: 186 QRVPATEAQGRIHTSAATVAVLP-EAEDIDVDIKPEDIRIDTMRASGAGGQHVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG++V E+SQH+N+A+A +LRA+L+++E + E+ + ++G G Sbjct: 245 RITHLPTGIMV-VSAEKSQHQNRARAMQILRARLFDMERSR--AANERSEARRLQVGTGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V++G+LD+ + A +A + Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGELDEVIDALIADHQ 348 >gi|194398144|ref|YP_002037655.1| peptide chain release factor 1 [Streptococcus pneumoniae G54] gi|238690818|sp|B5E4D9|RF1_STRP4 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|194357811|gb|ACF56259.1| peptide chain release factor 1 [Streptococcus pneumoniae G54] Length = 359 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 98/348 (28%), Positives = 160/348 (45%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + + +E + L + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNIVDAEEM 66 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E G K ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEXDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350 >gi|25027860|ref|NP_737914.1| peptide chain release factor 1 [Corynebacterium efficiens YS-314] gi|259506251|ref|ZP_05749153.1| peptide chain release factor 1 [Corynebacterium efficiens YS-314] gi|81749553|sp|Q8FQ31|RF1_COREF RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|23493143|dbj|BAC18114.1| putative peptide chain release factor 1 [Corynebacterium efficiens YS-314] gi|259166155|gb|EEW50709.1| peptide chain release factor 1 [Corynebacterium efficiens YS-314] Length = 358 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 116/348 (33%), Positives = 174/348 (50%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ + L + DP L + A+ + + L I+ +++ D E+ Sbjct: 8 VDDILAEYHGLEEQMADPALHNDPAAARRVGKRYSELQPIINVHRQLVQVRDDLEAAREM 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D E + E E D +D +E+ AGAGG E+ +A Sbjct: 68 --AHEDHEFAAEAERLEVELVELEEKLADLLAPRDEHDGDDIVMEIKAGAGGEEAALFAG 125 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-----YGWLKGEQGVHRL 190 LLRMY ++A+K F E L+ + + G+K TL I+ + K E GVHR+ Sbjct: 126 DLLRMYQKYADKHGFIIEVLDSAESDLGGVKDITLSIRSRQPSRDGAWSQFKFEGGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R TS + + VYP D+ ++EI E + R+D YR+SG GGQ VNTTDSAV Sbjct: 186 QRVPVTESQGRIQTSAAGVLVYPEPDEVEDVEIDEKEIRVDVYRSSGKGGQGVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307 RITH+PTG+VV CQ+ERSQ +N+A+A +L A+L LQK E A E ++I Sbjct: 246 RITHLPTGIVVTCQKERSQIQNRARAMQVLAARL--QALQKEEADAEAAEGRASQIRTMD 303 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + + VL+G+LDD A A ++ Sbjct: 304 RSERIRTYNW-PENRISDHRIGFKANNLDAVLNGELDDLFTALRAAER 350 >gi|56808656|ref|ZP_00366381.1| COG0216: Protein chain release factor A [Streptococcus pyogenes M49 591] gi|71903502|ref|YP_280305.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS6180] gi|71910676|ref|YP_282226.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS5005] gi|209559423|ref|YP_002285895.1| peptide chain release factor 1 [Streptococcus pyogenes NZ131] gi|119361623|sp|Q48TL0|RF1_STRPM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238054473|sp|B5XLI8|RF1_STRPZ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|71802597|gb|AAX71950.1| bacterial peptide chain release factor 1 [Streptococcus pyogenes MGAS6180] gi|71853458|gb|AAZ51481.1| bacterial peptide chain release factor 1 [Streptococcus pyogenes MGAS5005] gi|209540624|gb|ACI61200.1| Peptide chain release factor 1 [Streptococcus pyogenes NZ131] Length = 359 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 96/348 (27%), Positives = 162/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L RE + ++ +E + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQTISDAEEM 66 Query: 76 ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + L+E + + + E + L D + LE+ AGG E+ Sbjct: 67 IKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+ HIPTG+ V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ +G G Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G +D+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQ 350 >gi|257785108|ref|YP_003180325.1| peptide chain release factor 1 [Atopobium parvulum DSM 20469] gi|257473615|gb|ACV51734.1| peptide chain release factor 1 [Atopobium parvulum DSM 20469] Length = 355 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 112/335 (33%), Positives = 165/335 (49%), Gaps = 14/335 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V + L K DP + + E + +E + + ++ + L D EL Sbjct: 5 LEKIVDAYAELEQKLADPAVVSDPKEYARVAKEHSNQADLVAHANKYITALDDIEAAKEL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 D + +++ + + + E D D +E+ AG GG E+ Sbjct: 65 LNATSDPEEKEMLQEDIAANEEMLPQLEDEIKVMLIPGDPNDEKDTIVEIRAGVGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L +MY R+AE R +KTE L E G K+ + G Y +K E GVHR+ Sbjct: 125 IFAGDLFKMYERFAEARGWKTEILSSSPSEAGGFKTIEFKVTGDKVYSVMKYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R TS +++ V P D I+I+I++ D RIDTY ASG GGQ VNTT SAVR Sbjct: 185 RVPKTESQGRIQTSTATVAVLP-EADEIDIQINQEDLRIDTYCASGPGGQCVNTTYSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---W 308 ITH+PT VVQ Q +RSQ +N+ MLRA+LYE+EL++++ G ++IG Sbjct: 244 ITHLPTNTVVQSQDQRSQIQNREVCMQMLRARLYEMELERQQAEQ--GAERLSQIGHGAR 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIE-KTSPSDVLDGD 342 +IR+Y QP V D R + VL GD Sbjct: 302 SEKIRTYN-QPQDRVTDHRVGFNGTYN--GVLLGD 333 >gi|303232564|ref|ZP_07319250.1| peptide chain release factor 1 [Atopobium vaginae PB189-T1-4] gi|302481351|gb|EFL44425.1| peptide chain release factor 1 [Atopobium vaginae PB189-T1-4] Length = 354 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 111/334 (33%), Positives = 168/334 (50%), Gaps = 13/334 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL---IL 72 + + + L K DP + + E + +E H ++ KE L D + Sbjct: 5 LEKLIAAYAELEKKMVDPAVVADQKEYTRIAKEHAHQSELVALAKEYIAALDDIEAAKEM 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L A ++ + + + N +++ + + + D D +E+ A AGG E+ Sbjct: 65 LHEASSDEREMLQADIAANEEKLPALEDDIKIMLIPGDPNDEKDTIVEIRAAAGGDEAAI 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L +MY R+A+ + +K E L E G K+ + G Y +K E GVHR+ R Sbjct: 125 FAGDLYKMYERFADSKHWKIEVLSSSPSEAGGFKTIEFKMLGDKVYSVMKYESGVHRVQR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R TS +++ V P D I+++I +D RIDTY ASG GGQ VNTT SAVRI Sbjct: 185 VPKTESQGRIQTSTATVAVLP-EADEIDVQIDPTDLRIDTYCASGPGGQCVNTTYSAVRI 243 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311 TH+PT VVQ Q +RSQ +N+ MLRA+LYE+EL+K++ G ++IG G + Sbjct: 244 THLPTNTVVQSQDQRSQIQNREVCMQMLRARLYEMELEKQQAEQ--GAERLSQIGRGNRS 301 Query: 312 --IRSYVLQPYQMVKDLRTNI-EKTSPSDVLDGD 342 IR+Y QP V D R + VL GD Sbjct: 302 EKIRTYN-QPQDRVTDHRIGFNSTYN--GVLLGD 332 >gi|239982315|ref|ZP_04704839.1| peptide chain release factor 1 [Streptomyces albus J1074] gi|291454159|ref|ZP_06593549.1| peptide chain release factor 1 [Streptomyces albus J1074] gi|291357108|gb|EFE84010.1| peptide chain release factor 1 [Streptomyces albus J1074] Length = 358 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 114/350 (32%), Positives = 174/350 (49%), Gaps = 16/350 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + + + + + DP + + A+ L + L + + + D Sbjct: 1 MFEAVEELIGEHADIEKRLADPAVHADQAGARKLNKRYAELTPIVGTYRSWKQTGEDIET 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EL DD E + + E + + +D D LE+ AGAGG ES Sbjct: 61 AREL--AADDPDFAAEVKELEAAREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN----------AYGWL 181 +A LLRMY R+AE+ +KTE ++ + E G K + +K + L Sbjct: 119 LFAGDLLRMYLRYAERVGWKTELIDSTESELGGYKDVQVAVKTKGGQGATEPGQGVWARL 178 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHR+ R+ +S R HTS + + V P + I++EI+++D RID YR+SG GGQ Sbjct: 179 KYEGGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEIDVEINQNDLRIDVYRSSGPGGQ 237 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PTGVV CQ E+SQ +NK QA +LR++L ++ E A Sbjct: 238 SVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREAADARR 297 Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 S+ + +IR+Y P + D R + + VLDG+LD ++A Sbjct: 298 SQVRTVDRSEKIRTYNY-PENRISDHRVGFKAYNLDQVLDGELDAVIQAC 346 >gi|110003948|emb|CAK98288.1| peptide chain release factor 1 protein [Spiroplasma citri] Length = 358 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 113/347 (32%), Positives = 181/347 (52%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R + +N + P + +V + L +E+ L+ ++ ++ L + + Sbjct: 9 LETMLKRWNLINEELTKPEIVNDVKKLTSLAKEQAQLEETVALYLNYKNVLNNINEAKLI 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 E D +++ + L+ ++ E E D + E+ AGG E Sbjct: 69 LETEKDYELIELAKEELKTSEIRKEQLAAELKVILLPKDPNDDKNVIFEIRGAAGGDEGN 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY ++AE++ +K E +E ++ E G + + ++KG Y +K E G HR+ Sbjct: 129 IFAGDLYRMYIKYAEQQHWKVELIEANESEAGGFSTISFMVKGDRVYSKMKFESGAHRVQ 188 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ V P + ++ EI +D +IDTYRASGAGGQHVNTTDSAVR Sbjct: 189 RIPKTESKGRVHTSTATVAVLP-EIEEVDFEIKTADLKIDTYRASGAGGQHVNTTDSAVR 247 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG VV Q RSQH NKA A LR+KLYE + +K E K +G G Sbjct: 248 ITHLPTGFVVTSQDGRSQHDNKALAMQHLRSKLYEEQQRKINEERWTL--RKDAVGTGDR 305 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +++G+LD+ + A + ++ Sbjct: 306 SEKIRTYNY-PQNRVTDHRINLTLQKLDQIMEGNLDEIVVALINEEQ 351 >gi|121602027|ref|YP_988678.1| peptide chain release factor 1 [Bartonella bacilliformis KC583] gi|166223530|sp|A1URS5|RF1_BARBK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|120614204|gb|ABM44805.1| peptide chain release factor 1 [Bartonella bacilliformis KC583] Length = 359 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 118/348 (33%), Positives = 180/348 (51%), Gaps = 18/348 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +R + ++ P N L E L ++ I+ + + L + Sbjct: 10 KQIEKRFEIIESQMAQNP----NAETYVKLASEYAELQQIVTPIRTLNALYKEVTELEAM 65 Query: 76 ALEEDDCSILQETSDN-----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 A + + + Q+I+ + Q L AD A +E+ AG GG+E+ Sbjct: 66 ANTTQIDADMYALAQEELVLLRQKIEQLEQEIQILLLPKDIADEKSAIIEIRAGTGGSEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A K+K E + + D E G K I G + LK E GVHR+ Sbjct: 126 ALFAGDLFRMYERYANAHKWKVEVVSLSDSEVGGYKEIIATISGKGVFSKLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +++ R HTS +++ V P + I+IEI D RIDT RASGAGGQHVNTTDSAV Sbjct: 186 QRVPETETSGRIHTSAATVAVLP-EAEEIDIEIRPEDIRIDTMRASGAGGQHVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG++V Q E+SQH+N+A+A +LR++L+++E QK + S KT++G G Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARALQILRSRLFDIERQK--AESERSASRKTQVGSGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +++GDLD+ + ++ + Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRIMEGDLDELINPLISNHQ 348 >gi|157736354|ref|YP_001489037.1| peptide chain release factor 1 [Arcobacter butzleri RM4018] gi|315635491|ref|ZP_07890757.1| peptide chain release factor RF1 [Arcobacter butzleri JV22] gi|166977359|sp|A8EQZ4|RF1_ARCB4 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|157698208|gb|ABV66368.1| peptide chain release factor 1 [Arcobacter butzleri RM4018] gi|315480249|gb|EFU70916.1| peptide chain release factor RF1 [Arcobacter butzleri JV22] Length = 355 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 116/341 (34%), Positives = 176/341 (51%), Gaps = 9/341 (2%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 + R +N + ++ L +E+ + +S KE L D + + Sbjct: 10 INRFEEINQLLMSSEITSDIKRMTDLSKEQSSIQPIVSKAKEYIKVLEDIEENKLMLDDP 69 Query: 80 DDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 + + +E L+ K E + + D + YLE+ AG GG E+ + L Sbjct: 70 ELGDLAKEELKELETRKPELEEEIKVLMIPKDPNDDRNIYLELRAGTGGDEAAIFVGDLF 129 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 R Y R+AE +K E + D E G K +L+KG + Y LK E G HR+ R+ +S Sbjct: 130 RAYLRYAENNGWKVEIMSSSDSESGGYKEIVILVKGDHVYSKLKFEGGTHRVQRVPATES 189 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R HTS ++ V P D +EIEI+E+D +ID RASG GGQ VNTTDSAVRITHIP+G Sbjct: 190 QGRVHTSAITVAVMP-EVDDVEIEINENDLKIDVMRASGNGGQSVNTTDSAVRITHIPSG 248 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSY 315 +VV Q ++SQHKNK +A +L+AKLYE+E++K+ E G + K ++G G +IR+Y Sbjct: 249 IVVTNQDQKSQHKNKDRALKVLKAKLYEIEMEKKME--AEGATRKEQVGTGDRSGRIRTY 306 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 P + D R N+ ++ DG + + +A + Sbjct: 307 NY-PQNRISDHRINLTLYRLDYIMNDGLFGEVIDPLIADHQ 346 >gi|328946334|gb|EGG40478.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1087] gi|332361225|gb|EGJ39029.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1056] Length = 359 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 99/348 (28%), Positives = 163/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + L + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTNRFMELSKEEASTRDTVTAYREYKKVLQNITDAEEM 66 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 Q +A LL+MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350 >gi|296876522|ref|ZP_06900573.1| peptide chain release factor RF1 [Streptococcus parasanguinis ATCC 15912] gi|296432515|gb|EFH18311.1| peptide chain release factor RF1 [Streptococcus parasanguinis ATCC 15912] Length = 359 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 102/348 (29%), Positives = 164/348 (47%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + L + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66 Query: 76 ALEEDDC-----SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E D QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKEAGDDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 Q +A LL+MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D RID Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350 >gi|226360607|ref|YP_002778385.1| peptide chain release factor 1 [Rhodococcus opacus B4] gi|226239092|dbj|BAH49440.1| peptide chain release factor 1 [Rhodococcus opacus B4] Length = 359 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 113/346 (32%), Positives = 171/346 (49%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ + + L + DP L + A+ + L ++ ++ D EL Sbjct: 10 IDDILAEHAGLEQQLADPALHNDASAARKAGKRFAELAPIMATYTRLKSAQDDLDAAREL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A ++ + + + D +D LEV +G GG ES +A+ Sbjct: 70 AADDSSFAAEVPALEEQVLELDKTLTDLL--APRDPHDGDDVVLEVKSGEGGEESALFAS 127 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190 L RMY R+AE+ ++ E L+ + G K ATL IK + LK E GVHR+ Sbjct: 128 DLARMYVRYAERHGWRVEILDATVSDLGGYKDATLSIKSKGDVRDGVWARLKFEGGVHRV 187 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS + + +YP ++ E++I E+D RID YR+SG GGQ VNTTDSAV Sbjct: 188 QRVPVTESQGRVHTSAAGVLIYPEPEEVEEVQIDETDLRIDVYRSSGKGGQGVNTTDSAV 247 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG+VV CQ ERSQ +NKA+A +L A+L + + A+ G S+ + Sbjct: 248 RITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQAAAEEAADAEASAGRQSQVRTVDRS 307 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + + VLDG+LD + A + Sbjct: 308 ERIRTYNF-PENRITDHRIGFKSHNLDAVLDGELDALLDALGKSDR 352 >gi|229816317|ref|ZP_04446624.1| hypothetical protein COLINT_03367 [Collinsella intestinalis DSM 13280] gi|229808073|gb|EEP43868.1| hypothetical protein COLINT_03367 [Collinsella intestinalis DSM 13280] Length = 355 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 111/341 (32%), Positives = 171/341 (50%), Gaps = 15/341 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L K DP + ++ E L +E H + + +E L D + E+ Sbjct: 5 LEKIIIAFEELEKKLSDPAVASDIKEFTRLNKEYAHQTDLVKAAREYLGALDDIDVAKEM 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 + D + + + ++ + + D D +E+ + AGG E+ Sbjct: 65 LHDAVDADEKEMLQMEISENEAKLPQLEEDIKIMLIPGDPMDEKDTIVEIRSAAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L +MY R+ E +K+K L+ E G KS ++G Y +K E GVHR+ Sbjct: 125 IFAGDLFKMYQRFIESKKWKMTVLDSSPSEAGGFKSIEFKVEGDKVYSVMKYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R TS +++ V P D I+I+I+++D R+DTY ASG GGQ VNTT SAVR Sbjct: 185 RVPKTESQGRIQTSTATVAVLP-EADEIDIQINQADLRVDTYCASGPGGQCVNTTYSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---W 308 ITH+PT VVQ Q++RSQ +N+ MLRA+LYE+EL+K++ +G +IG Sbjct: 244 ITHLPTNTVVQSQEQRSQIQNREVCMQMLRARLYEMELEKQQAE--LGAERSAQIGHGNR 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNI-EKTSPSDVLDGD-LDDFM 347 +IR+Y L P V D R + VL GD L D + Sbjct: 302 SEKIRTYNL-PQDRVTDHRIGFNSTYN--GVLLGDQLSDVI 339 >gi|306823422|ref|ZP_07456797.1| peptide chain release factor RF1 [Bifidobacterium dentium ATCC 27679] gi|309802666|ref|ZP_07696770.1| peptide chain release factor 1 [Bifidobacterium dentium JCVIHMP022] gi|304553129|gb|EFM41041.1| peptide chain release factor RF1 [Bifidobacterium dentium ATCC 27679] gi|308220730|gb|EFO77038.1| peptide chain release factor 1 [Bifidobacterium dentium JCVIHMP022] Length = 362 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 104/345 (30%), Positives = 163/345 (47%), Gaps = 16/345 (4%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + + + +P + + + + L R L +S + D E+ + Sbjct: 14 EEYRNIEQQMAEPEVASDPDKMRKLGRRHAELGAIVSAYTAYKQTKDDLEAAKEM--ASE 71 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D +E + E + + D+ D +E+ AG GG E+ +A LLRM Sbjct: 72 DPDFAEEAKRLENELPEFEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAALFAGDLLRM 131 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193 Y R+AEKR + + E G+K L I + LK E GVHR+ RI Sbjct: 132 YMRYAEKRGWAVTLQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEGGVHRVQRI 191 Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 +S R TS + + V+P +D EI+I D +ID + +SG GGQ VNTT SAVR+ Sbjct: 192 PVTESQGRIQTSAAGVIVFPEADEDDDEIDIDPKDLKIDIFMSSGPGGQSVNTTYSAVRM 251 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309 THIPTG+VV Q E+SQ +N+A A +L+++L L ++ EE A + +++ Sbjct: 252 THIPTGIVVSMQDEKSQIQNRASALRVLKSRL--LAMKHEEEAAQAADMRHSQVRSLDRS 309 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RTN + + VLDGDL + + + Sbjct: 310 ERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 353 >gi|119511149|ref|ZP_01630266.1| peptide chain release factor 1 [Nodularia spumigena CCY9414] gi|119464137|gb|EAW45057.1| peptide chain release factor 1 [Nodularia spumigena CCY9414] Length = 365 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 101/348 (29%), Positives = 174/348 (50%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + Q L + DP N E + + + R L+ ++ + + + ++ Sbjct: 10 LKSVEQTFHELTRRLADPDTASNPDEYQKIAKSRSSLEEVVNTYETWKIATEELAGARQV 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130 E + L E + E + L D + LE+ AG GG E+ Sbjct: 70 LKEANGDPELHEMAALEVNELEEKLEHLEARLKVLLLPRDPNDEKNIMLEIRAGTGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA LLRMY+R+AE + +K + + GE G K L I+G + Y LK E GVHR+ Sbjct: 130 SIWAGDLLRMYSRYAELQHWKVKLVSESLGEMGGFKEVILEIQGDSVYSQLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ + P D +EI I D + T R+ GAGGQ+VN ++A Sbjct: 190 QRVPATEAGGRVHTSTATVAIMP-EVDDVEIHIDPKDIEMSTARSGGAGGQNVNKVETAA 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ + C +ERSQ +NK +A +LRAKLYE++L ++++ + ++++G G Sbjct: 249 DLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMKLAEQQD--AVTSMRRSQVGTGS 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D R + S + VL+G+L+ +++ ++ + Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLG-QNYSLNPVLEGELETVIQSCISQDQ 352 >gi|149019616|ref|ZP_01834935.1| peptide chain release factor 1 [Streptococcus pneumoniae SP23-BS72] gi|168483091|ref|ZP_02708043.1| peptide chain release factor 1 [Streptococcus pneumoniae CDC1873-00] gi|147930991|gb|EDK81971.1| peptide chain release factor 1 [Streptococcus pneumoniae SP23-BS72] gi|172043551|gb|EDT51597.1| peptide chain release factor 1 [Streptococcus pneumoniae CDC1873-00] gi|301799986|emb|CBW32576.1| peptide chain release factor 1 [Streptococcus pneumoniae OXC141] gi|332200609|gb|EGJ14681.1| peptide chain release factor 1 [Streptococcus pneumoniae GA41317] Length = 359 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 98/348 (28%), Positives = 160/348 (45%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + + +E + L + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNIVDAEEM 66 Query: 76 ALEEDDCSI-----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKESGGDADLEELAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E G K ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350 >gi|84503529|ref|ZP_01001580.1| peptide chain release factor 1 [Oceanicola batsensis HTCC2597] gi|84388019|gb|EAQ01067.1| peptide chain release factor 1 [Oceanicola batsensis HTCC2597] Length = 349 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 117/344 (34%), Positives = 176/344 (51%), Gaps = 14/344 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 QR +L + + + L RE L ++ I + L Sbjct: 7 LAQITQRFEYLEARMAEGG-----GDFAALSREYSELRPVVATIAAWEQAQTALSEAEGL 61 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + ++ E L+ + Q L ADS A +E+ G GG E+ +A Sbjct: 62 RDDPEMRALADEEIQRLRHDLPELEQALQIALLPKDAADSRPAMIEIRPGTGGDEAALFA 121 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R++E R ++ + +E+++ E GIK ++G N + LK E GVHR+ R+ Sbjct: 122 GDLLRMYQRYSEARGWRFQVVELNETELGGIKEVVANVQGENVFARLKFESGVHRVQRVP 181 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P + ++I+I S+ RIDT RASGAGGQHVNTTDSAVRITH Sbjct: 182 ETESGGRIHTSAATVAVLP-EAEDVDIQIDPSEIRIDTMRASGAGGQHVNTTDSAVRITH 240 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV E+SQH+N+A A +LR +L++LE QK + ++G G + Sbjct: 241 VPTGIVV-VSSEKSQHQNRAIAMQVLRTRLFDLERQKAADARAADRK--AQVGTGDRSER 297 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ V+ GDLD+ + A A + Sbjct: 298 IRTYNF-PQGRVTDHRINLTLYRLDQVMQGDLDEVIDALTADHQ 340 >gi|33519808|ref|NP_878640.1| peptide chain release factor 1 [Candidatus Blochmannia floridanus] gi|81666793|sp|Q7VR74|RF1_BLOFL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|33504153|emb|CAD83415.1| peptide chain release factor 1 (RF-1) [Candidatus Blochmannia floridanus] Length = 358 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 114/334 (34%), Positives = 182/334 (54%), Gaps = 7/334 (2%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 + QR L + + N L +E +L I + +E + + + ++ Sbjct: 11 SLKQRFYKLEKSLNNFNTINNKEFY-SLSKEHTYLHEIIKYFEEWLNIQKNIVHTKDMLS 69 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 + D I+Q+ L K +E K L S D + ++E+ AG GG E+ +A L Sbjct: 70 DIDMHDIVQDELKILNTSKHNLENKIKILLFSDPQDQYNCFIELRAGTGGKEAAIFAGEL 129 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY+R+ E +++ E + GE G K + + +YG LK E G HR+ RI + Sbjct: 130 FRMYSRYIEMQRWNMEIIHATYGECGGYKEIIIKVPVHGSYGQLKFESGGHRVQRIPNTE 189 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 S R HTS +I V P + ++I EI+ +D RIDT+R+SGAGGQHVNTTDSA+RITHIP+ Sbjct: 190 SQGRIHTSTCTIAVIPNIPNAILPEINSNDLRIDTFRSSGAGGQHVNTTDSAIRITHIPS 249 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314 G+ V+CQ ERSQHKNK++A ++L+++LY + ++++++ + + IG G +IR+ Sbjct: 250 GLSVECQDERSQHKNKSKALSVLKSRLYAINIKQKQQEESNV--RRNLIGTGDRSDRIRT 307 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 Y Q V D R D+++G LD ++ Sbjct: 308 YNFQ-QGRVTDHRIAFTSYKLHDIMNGKLDILIQ 340 >gi|182677881|ref|YP_001832027.1| peptide chain release factor 1 [Beijerinckia indica subsp. indica ATCC 9039] gi|238691232|sp|B2IHL7|RF1_BEII9 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|182633764|gb|ACB94538.1| peptide chain release factor 1 [Beijerinckia indica subsp. indica ATCC 9039] Length = 358 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 112/346 (32%), Positives = 178/346 (51%), Gaps = 18/346 (5%) Query: 16 WDNAVQRLSFLNTKT-EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 D ++R ++ + E+P + L RE LD I+ +D + + + Sbjct: 7 LDLILRRHEEISARLTENP----DAATFVSLSRELAGLDEVAQAIRAYRDEMTEISGMEA 62 Query: 75 L-----ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 + E +E D QR+ ++ + L D A LE+ AG GG E Sbjct: 63 MLADPATEPELLALAEEELQDARQRLGAFEQHLRIALLPKDADDEKSAILEIRAGTGGDE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A L RMY R+AE + + E L + +G G K I G + LK E G HR Sbjct: 123 AALFAGDLFRMYQRYAEAKGWGVEILSVSEGTAGGYKEIVAEITGKGVFAKLKFESGTHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ ++ R HTS +++ V P + +++EI+E+D +IDT RA GAGGQHVN T+SA Sbjct: 183 VQRVPDTETQGRIHTSAATVAVLP-QAEEVDVEINEADLKIDTMRAQGAGGQHVNKTESA 241 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 +RITH+PTG V+ Q ERSQHKN+A+A ++LR+++Y+ + Q+ E K ++G G Sbjct: 242 IRITHLPTGTVIFVQDERSQHKNRARAMSLLRSRIYDAKRQQLEAER--AADRKAQVGSG 299 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351 +IR+Y P + D R N+ V+ G+ LD+ + A + Sbjct: 300 DRSERIRTYNF-PQGRLTDHRINLTLYKLDKVMTGEALDEVIDALI 344 >gi|15902968|ref|NP_358518.1| peptide chain release factor 1 [Streptococcus pneumoniae R6] gi|116517153|ref|YP_816384.1| peptide chain release factor 1 [Streptococcus pneumoniae D39] gi|148994243|ref|ZP_01823536.1| peptide chain release factor 1 [Streptococcus pneumoniae SP9-BS68] gi|148998842|ref|ZP_01826278.1| peptide chain release factor 1 [Streptococcus pneumoniae SP11-BS70] gi|149003880|ref|ZP_01828703.1| peptide chain release factor 1 [Streptococcus pneumoniae SP14-BS69] gi|149006296|ref|ZP_01830008.1| peptide chain release factor 1 [Streptococcus pneumoniae SP18-BS74] gi|149012959|ref|ZP_01833848.1| peptide chain release factor 1 [Streptococcus pneumoniae SP19-BS75] gi|168488841|ref|ZP_02713040.1| peptide chain release factor 1 [Streptococcus pneumoniae SP195] gi|168491915|ref|ZP_02716058.1| peptide chain release factor 1 [Streptococcus pneumoniae CDC0288-04] gi|168494449|ref|ZP_02718592.1| peptide chain release factor 1 [Streptococcus pneumoniae CDC3059-06] gi|168576251|ref|ZP_02722145.1| peptide chain release factor 1 [Streptococcus pneumoniae MLV-016] gi|182683968|ref|YP_001835715.1| peptide chain release factor 1 [Streptococcus pneumoniae CGSP14] gi|221231773|ref|YP_002510925.1| peptide chain release factor 1 [Streptococcus pneumoniae ATCC 700669] gi|225854521|ref|YP_002736033.1| peptide chain release factor 1 [Streptococcus pneumoniae JJA] gi|225856675|ref|YP_002738186.1| peptide chain release factor 1 [Streptococcus pneumoniae P1031] gi|225858811|ref|YP_002740321.1| peptide chain release factor 1 [Streptococcus pneumoniae 70585] gi|237650077|ref|ZP_04524329.1| peptide chain release factor 1 [Streptococcus pneumoniae CCRI 1974] gi|237822154|ref|ZP_04597999.1| peptide chain release factor 1 [Streptococcus pneumoniae CCRI 1974M2] gi|303255576|ref|ZP_07341627.1| peptide chain release factor 1 [Streptococcus pneumoniae BS455] gi|303260464|ref|ZP_07346432.1| peptide chain release factor 1 [Streptococcus pneumoniae SP-BS293] gi|303262821|ref|ZP_07348758.1| peptide chain release factor 1 [Streptococcus pneumoniae SP14-BS292] gi|303265291|ref|ZP_07351201.1| peptide chain release factor 1 [Streptococcus pneumoniae BS397] gi|303266498|ref|ZP_07352385.1| peptide chain release factor 1 [Streptococcus pneumoniae BS457] gi|303268383|ref|ZP_07354179.1| peptide chain release factor 1 [Streptococcus pneumoniae BS458] gi|307067803|ref|YP_003876769.1| protein chain release factor A [Streptococcus pneumoniae AP200] gi|307127431|ref|YP_003879462.1| peptide chain release factor 1 [Streptococcus pneumoniae 670-6B] gi|32171541|sp|Q8DPZ4|RF1_STRR6 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|122278730|sp|Q04KR4|RF1_STRP2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238691157|sp|B2IPH6|RF1_STRPS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790899|sp|C1C6Z5|RF1_STRP7 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790900|sp|B8ZPH1|RF1_STRPJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790902|sp|C1CE12|RF1_STRZJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790903|sp|C1CK98|RF1_STRZP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|15458532|gb|AAK99728.1| Peptide chain release factor I [Streptococcus pneumoniae R6] gi|116077729|gb|ABJ55449.1| peptide chain release factor 1 [Streptococcus pneumoniae D39] gi|147755269|gb|EDK62320.1| peptide chain release factor 1 [Streptococcus pneumoniae SP11-BS70] gi|147758110|gb|EDK65114.1| peptide chain release factor 1 [Streptococcus pneumoniae SP14-BS69] gi|147762073|gb|EDK69035.1| peptide chain release factor 1 [Streptococcus pneumoniae SP18-BS74] gi|147763112|gb|EDK70053.1| peptide chain release factor 1 [Streptococcus pneumoniae SP19-BS75] gi|147927384|gb|EDK78415.1| peptide chain release factor 1 [Streptococcus pneumoniae SP9-BS68] gi|182629302|gb|ACB90250.1| peptide chain release factor 1 [Streptococcus pneumoniae CGSP14] gi|183572574|gb|EDT93102.1| peptide chain release factor 1 [Streptococcus pneumoniae SP195] gi|183573754|gb|EDT94282.1| peptide chain release factor 1 [Streptococcus pneumoniae CDC0288-04] gi|183575581|gb|EDT96109.1| peptide chain release factor 1 [Streptococcus pneumoniae CDC3059-06] gi|183577929|gb|EDT98457.1| peptide chain release factor 1 [Streptococcus pneumoniae MLV-016] gi|220674233|emb|CAR68768.1| peptide chain release factor 1 [Streptococcus pneumoniae ATCC 700669] gi|225720924|gb|ACO16778.1| peptide chain release factor 1 [Streptococcus pneumoniae 70585] gi|225723680|gb|ACO19533.1| peptide chain release factor 1 [Streptococcus pneumoniae JJA] gi|225724367|gb|ACO20219.1| peptide chain release factor 1 [Streptococcus pneumoniae P1031] gi|301794156|emb|CBW36566.1| peptide chain release factor 1 [Streptococcus pneumoniae INV104] gi|301801854|emb|CBW34572.1| peptide chain release factor 1 [Streptococcus pneumoniae INV200] gi|302597432|gb|EFL64527.1| peptide chain release factor 1 [Streptococcus pneumoniae BS455] gi|302636019|gb|EFL66517.1| peptide chain release factor 1 [Streptococcus pneumoniae SP14-BS292] gi|302638376|gb|EFL68843.1| peptide chain release factor 1 [Streptococcus pneumoniae SP-BS293] gi|302642104|gb|EFL72455.1| peptide chain release factor 1 [Streptococcus pneumoniae BS458] gi|302643949|gb|EFL74209.1| peptide chain release factor 1 [Streptococcus pneumoniae BS457] gi|302645156|gb|EFL75393.1| peptide chain release factor 1 [Streptococcus pneumoniae BS397] gi|306409340|gb|ADM84767.1| Protein chain release factor A [Streptococcus pneumoniae AP200] gi|306484493|gb|ADM91362.1| peptide chain release factor 1 [Streptococcus pneumoniae 670-6B] gi|332073352|gb|EGI83831.1| peptide chain release factor 1 [Streptococcus pneumoniae GA17570] gi|332075368|gb|EGI85837.1| peptide chain release factor 1 [Streptococcus pneumoniae GA41301] gi|332075634|gb|EGI86102.1| peptide chain release factor 1 [Streptococcus pneumoniae GA17545] gi|332202882|gb|EGJ16950.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47901] Length = 359 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 98/348 (28%), Positives = 160/348 (45%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + + +E + L + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNIVDAEEM 66 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E G K ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350 >gi|293363656|ref|ZP_06610406.1| peptide chain release factor 1 [Mycoplasma alligatoris A21JP2] gi|292552763|gb|EFF41523.1| peptide chain release factor 1 [Mycoplasma alligatoris A21JP2] Length = 354 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 102/341 (29%), Positives = 172/341 (50%), Gaps = 5/341 (1%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLE 74 + + + +P + ++ + L +E ++ + + ++ L + +L Sbjct: 7 SIKSKYEEMQQNLANPDVISDIKKYTKLNKELNSIEEIVVSFNKYLNAEENLKNAKEMLA 66 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 E E S+N + + + L E DS + +E+ AGG E+ +A Sbjct: 67 EKDSELVELAKIEISENEEIMTKLGAELKILILPKDENDSKNVIVEIRGAAGGDEANIFA 126 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY +W+++ + + L+ E G T + G Y LK E GVHR+ RI Sbjct: 127 GDLFRMYQKWSDQNDMRLKVLDETRAEAGGFTLITFTVTGEKPYSKLKFESGVHRVQRIP 186 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS +++ V P +DD IEIE+ D R+D +R+SG GGQ VNTTDSAVR+TH Sbjct: 187 VTETKGRVHTSTATVTVMPEIDDDIEIEVKPEDIRVDVFRSSGNGGQSVNTTDSAVRLTH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 TG+VV CQ+ +SQ +NK A +L++KLY+LEL+K++E + +IR+ Sbjct: 247 NATGIVVSCQEGKSQIQNKEIAMRILKSKLYDLELKKKQEEESGYRKLAGLGFRSEKIRT 306 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 Y P V D R + + S V++G ++ + + L ++ Sbjct: 307 YNY-PQDRVTDHRISYSTS-LSPVMEGKVNSIIDSLLTAEQ 345 >gi|319781345|ref|YP_004140821.1| peptide chain release factor 1 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167233|gb|ADV10771.1| peptide chain release factor 1 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 359 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 116/348 (33%), Positives = 184/348 (52%), Gaps = 18/348 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V+R L + P + E + + ++ ++ ++ + L + Sbjct: 10 DQVVKRFEMLEAQMSAGPA----PDAYVRMASEYAEIQDMVAKVRALRAAEHEQADLEAM 65 Query: 76 ALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + ++ ++ RI+ + Q L AD +A LE+ AG GG E+ Sbjct: 66 LADRGTDAEMRALAEAELPGVEDRIEALQKDIQILLLPRDAADDKNAILEIRAGTGGDEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A +R ++ E DG+ G K + G + LK E GVHR+ Sbjct: 126 ALFAGDLFRMYERYAAERGWRFETASASDGDAGGYKEIIATVSGKGVFAHLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +++ R HTS +++ V P + ++I+I D RIDT RASG+GGQHVNTTDSAV Sbjct: 186 QRVPATEASGRIHTSAATVAVLP-EAEEVDIDIRAEDIRIDTMRASGSGGQHVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG++V Q E+SQH+N+A+A +LRA+LY+LE K +E ES K+++G G Sbjct: 245 RITHLPTGIMV-VQAEKSQHQNRAKAMQILRARLYDLERGKADEER--SESRKSQVGSGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+ G+LD+ + A +A + Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMMGELDEIINALIADHQ 348 >gi|156742398|ref|YP_001432527.1| peptide chain release factor 1 [Roseiflexus castenholzii DSM 13941] gi|156233726|gb|ABU58509.1| peptide chain release factor 1 [Roseiflexus castenholzii DSM 13941] Length = 364 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 109/349 (31%), Positives = 168/349 (48%), Gaps = 14/349 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R L P + + + + RE++ L+ + + +D L Sbjct: 9 LASITARYDELLDLMAQPDVATDPVRLQRYAREQRELEPLVEAYRAYRDVERQIEDTSFL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 E D + Q D L + + + DS +A +E+ G GG E+ Sbjct: 69 LEHETDQDVRQLAQDELDHLLERRAQLEQQIKVLLLPRDPNDSKNAIMELRQGEGGDEAA 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYTR+AE+R + E + + G K ++G AY LK E GVHR+ Sbjct: 129 LFAADLFRMYTRYAEQRGWDIEVISATENGPGGYKEIIFEVRGEGAYSRLKYEGGVHRVQ 188 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P V+++ ++ SD R+D +R+ G GGQ VNTTDSAVR Sbjct: 189 RVPATEARGRIHTSTATVAVLPEVEETDIE-LNPSDYRVDVFRSGGHGGQGVNTTDSAVR 247 Query: 252 ITHIP---TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 I + P +VV CQ RSQ KNKA A +LRA+LY E +KR + +GE+ ++G Sbjct: 248 IVYKPGTPEEIVVTCQDSRSQLKNKASALAVLRARLYAREEEKRRKE--LGETRLAQVGA 305 Query: 309 GRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 G + IR+Y P V D R ++ +LDGDLD + + Sbjct: 306 GERAEKIRTYNF-PQDRVTDHRIGQNFSNLPGILDGDLDRLIDMLIIAD 353 >gi|77457286|ref|YP_346791.1| peptide chain release factor 2 [Pseudomonas fluorescens Pf0-1] gi|77381289|gb|ABA72802.1| putative Peptide chain release factor 2 (RF-2) protein [Pseudomonas fluorescens Pf0-1] Length = 280 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 154/257 (59%), Positives = 195/257 (75%), Gaps = 1/257 (0%) Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + + +F + S E D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F + Sbjct: 22 EESLSKLEFRRMFSHEMDPNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIM 81 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E+ GE AGIK AT+ IKG A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P + Sbjct: 82 ELSAGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEI 141 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DD +EIEI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH+PT VV CQ ERSQH NK Sbjct: 142 DDKVEIEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDT 201 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A MLRAKLYE E+QKR + E +K++IGWG QIRSYVL +KDLRTNIE++ Sbjct: 202 AMKMLRAKLYEQEMQKRNAASQALEDTKSDIGWGHQIRSYVLD-ASRIKDLRTNIERSDC 260 Query: 336 SDVLDGDLDDFMKATLA 352 VLDGD+D++++A+L Sbjct: 261 DKVLDGDIDEYLEASLK 277 >gi|149174661|ref|ZP_01853286.1| peptide chain release factor 1 [Planctomyces maris DSM 8797] gi|148846355|gb|EDL60693.1| peptide chain release factor 1 [Planctomyces maris DSM 8797] Length = 360 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 112/348 (32%), Positives = 174/348 (50%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R L + +DP + N + + RE L ++E R D + E+ Sbjct: 6 LQVKLDRYEELEKELQDPEVLANTSKLVEIQREYGGLAKVALAVREFNTRAEDIEVAREM 65 Query: 76 ALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EE D + + + + ++ + + +E+ AGAGG E+ Sbjct: 66 LEEETDPAAREYAQKELDELCEEHEKHIKELEDLVVAGDSITRGGLIMEIRAGAGGDEAA 125 Query: 132 DWANMLLRMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L MY + E ++ +KTE L + E G+K T I G AY L+ E G HR+ Sbjct: 126 LFARELFDMYMHFVEAQKGWKTEVLNMSATELGGLKEVTFSIAGEGAYHRLQFESGGHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P +E++I D R+DT+ ASG GGQ VN T+SAV Sbjct: 186 QRVPETETQGRVHTSAATVAVLP-EASEVEVDIKPDDIRLDTFHASGPGGQKVNKTESAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH+PTG VVQCQ E+SQHKNKA+A +LR+++ LE +++ + +T IG G Sbjct: 245 RITHLPTGTVVQCQDEKSQHKNKAKAMRVLRSRV--LEQMQQKAADERADQRRTLIGSGD 302 Query: 311 ---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ ++ GDL+D + A L + Sbjct: 303 RSQRIRTYNF-PQGRVTDHRINLSLYKIDQIMQGDLNDLISALLQFDR 349 >gi|326386588|ref|ZP_08208210.1| peptide chain release factor 1 [Novosphingobium nitrogenifigens DSM 19370] gi|326208903|gb|EGD59698.1| peptide chain release factor 1 [Novosphingobium nitrogenifigens DSM 19370] Length = 356 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 116/346 (33%), Positives = 173/346 (50%), Gaps = 12/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R + L + L + R+ L+ ++++ + L L Sbjct: 8 LDQIAARFAELEARLASGTL--DAEAFIAASRDYAELEPVAHTARDVRLLRDELASLAAL 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFE--SLLSGEADSNDAYLEVHAGAGGTESQDW 133 + D L E R +L ++ L ADS+ A LE+ AG GG E+ + Sbjct: 66 DEPDADMRALAEEEMARIRAELPEAERRLALAMLPRDNADSHPAMLEIRAGTGGDEAALF 125 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A L RMY R+A ++ +K E + + + G K + G + LK E GVHR+ R+ Sbjct: 126 AADLFRMYERYAAEQGWKVEVISANASDIGGFKEVIAHVAGQGVFAKLKYESGVHRVQRV 185 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +S R HTS +++ V P D +++ I + D +ID YRASGAGGQHVNTTDSAVRIT Sbjct: 186 PVTESGGRIHTSAATVAVLP-EPDEVDVSIDDKDLKIDIYRASGAGGQHVNTTDSAVRIT 244 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H+PTG+VV Q ERSQHKNKA+A +LR +LY+L ++ E+ + +G G Sbjct: 245 HLPTGIVVTQQDERSQHKNKAKAMQVLRTRLYDLRREQ--AQGAEAEARRAMVGSGDRSE 302 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIKK 355 +IR+Y P V D R N+ ++L G L + + A A + Sbjct: 303 RIRTYNF-PQGRVTDHRINLTLHRLPEILAGTGLGELIDALTAEDQ 347 >gi|332523754|ref|ZP_08400006.1| peptide chain release factor 1 [Streptococcus porcinus str. Jelinkova 176] gi|332315018|gb|EGJ28003.1| peptide chain release factor 1 [Streptococcus porcinus str. Jelinkova 176] Length = 359 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 96/348 (27%), Positives = 165/348 (47%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R L DP + + L +E + + ++ ++ ++ + E+ Sbjct: 7 LQSLEDRYEELGELLSDPEVVSDTKRFMQLSKEEANTRDTVTTYRQYKEIIQSIADAEEM 66 Query: 76 ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + ++E + + + E + L D + LE+ AGG E+ Sbjct: 67 IKESGGDAEIEEMAKEELKESKAAKENYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLVMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E EI D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEDVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI HIPT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHIPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G +D+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALIMYDQ 350 >gi|309791603|ref|ZP_07686096.1| peptide chain release factor 1 [Oscillochloris trichoides DG6] gi|308226321|gb|EFO80056.1| peptide chain release factor 1 [Oscillochloris trichoides DG6] Length = 360 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 112/353 (31%), Positives = 171/353 (48%), Gaps = 15/353 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + V R L P + N+ + RE++ L+ ++ + Q Sbjct: 1 MFDKLQSVVARYDELGELMAQPEVVNNLSLLQQYAREQRELEEVVNAFQAYQRARQAAEE 60 Query: 72 LLELALEEDDCSILQETSDNLQRIK----LEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + E D + + + L+ + E + L D+ D +E+ G GG Sbjct: 61 AHTMLNESSDAEMRELAHEELESQRTRIAQLEEEIKLLLLPRDPNDAKDVIIEIRQGEGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY R+AE R +K E I D G K A I+G NAY LK E GV Sbjct: 121 DEAALFAADLYRMYVRYAELRGWKVEVDSITDNGIGGFKEAVFEIRGENAYSQLKYEGGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS +++ V P V+ ++ I + D R D +R+ G GGQ VNTTD Sbjct: 181 HRVQRVPATEARGRIHTSTATVAVMPEVEPTVIE-IKDEDVRTDVFRSGGHGGQGVNTTD 239 Query: 248 SAVRITHI---PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 SAVR+ + P +VV CQ RSQ KN+ +A ++LRAKLY E +K++ G S Sbjct: 240 SAVRLVYRGGTPDEIVVTCQDGRSQIKNREKAMSVLRAKLYAREQEKQQ--RAQGASRLA 297 Query: 305 EIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 ++G G + IR+Y P + D R ++ VL G+LD + A + Sbjct: 298 QVGTGERAEKIRTYNF-PQDRITDHRIGQNFSNLPGVLAGNLDKIIDALIVYD 349 >gi|125717977|ref|YP_001035110.1| peptide chain release factor 1 [Streptococcus sanguinis SK36] gi|166223611|sp|A3CN05|RF1_STRSV RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|125497894|gb|ABN44560.1| Protein chain release factor A, putative [Streptococcus sanguinis SK36] gi|324991176|gb|EGC23110.1| peptide chain release factor RF1 [Streptococcus sanguinis SK353] gi|324994440|gb|EGC26353.1| peptide chain release factor RF1 [Streptococcus sanguinis SK678] Length = 359 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 99/348 (28%), Positives = 163/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + L + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMDLSKEEASTRDTVTAYREYKKVLQNITDAEEM 66 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 Q +A LL+MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350 >gi|327460378|gb|EGF06715.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1057] Length = 359 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 100/348 (28%), Positives = 163/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + L + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMDLSKEEASTRDTVTAYREYKKVLQNITDAEEM 66 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 Q +A LL+MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D RID Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350 >gi|251782311|ref|YP_002996613.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390940|dbj|BAH81399.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323127208|gb|ADX24505.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 359 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 95/348 (27%), Positives = 162/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPEVVSDTKRFMALSKEEASTRDTVTTYREYKQVIQAIADAEEM 66 Query: 76 ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + S L+E + + + E + L D + LE+ AGG E+ Sbjct: 67 IKDASGDSELEEMAKEELKESKAAKEDYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ + P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLIMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G +D+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEIIDALVMYDQ 350 >gi|171741092|ref|ZP_02916899.1| hypothetical protein BIFDEN_00158 [Bifidobacterium dentium ATCC 27678] gi|171276706|gb|EDT44367.1| hypothetical protein BIFDEN_00158 [Bifidobacterium dentium ATCC 27678] Length = 362 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 106/345 (30%), Positives = 165/345 (47%), Gaps = 16/345 (4%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + + + +P + + + + L R L +S + D E+A E+ Sbjct: 14 EEYRNIEQQMAEPEVASDPDKMRKLGRRHAELGAIVSAYTAYKQTKDDLEAAKEMASEDP 73 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D + + +N E + D+ D +E+ AG GG E+ +A LLRM Sbjct: 74 DFAEEAKRLENELPEIEEKLRTAL--IPRDPDDARDTIMEIKAGTGGEEAALFAGDLLRM 131 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193 Y R+AEKR + + E G+K L I + LK E GVHR+ RI Sbjct: 132 YMRYAEKRGWAVTLQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEGGVHRVQRI 191 Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 +S R TS + + V+P +D EI+I D +ID + +SG GGQ VNTT SAVR+ Sbjct: 192 PVTESQGRIQTSAAGVIVFPEADEDDDEIDIDPKDLKIDIFMSSGPGGQSVNTTYSAVRM 251 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309 THIPTG+VV Q E+SQ +N+A A +L+++L L ++ EE A + +++ Sbjct: 252 THIPTGIVVSMQDEKSQIQNRASALRVLKSRL--LAMKHEEEAAQAADMRHSQVRSLDRS 309 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RTN + + VLDGDL + + + Sbjct: 310 ERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 353 >gi|154246564|ref|YP_001417522.1| peptide chain release factor 1 [Xanthobacter autotrophicus Py2] gi|226739122|sp|A7IIM2|RF1_XANP2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|154160649|gb|ABS67865.1| peptide chain release factor 1 [Xanthobacter autotrophicus Py2] Length = 360 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 120/349 (34%), Positives = 172/349 (49%), Gaps = 16/349 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V R + + E L RE L + ++ ++D D EL Sbjct: 9 LDQLVARHAEIEAALSRG---AEGEEYVRLGREFSDLSPVVEQVRALKDAERDLEGANEL 65 Query: 76 ALEEDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E ++E RI+ + L D LEV AG GG E+ Sbjct: 66 LAESAADPEMREMAEAEVERLQDRIEALATAVRLALLPKDAMDERGIILEVRAGTGGDEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMYTR+A ++ + E L +G G K + G AY LK E GVHR+ Sbjct: 126 ALFAGDLYRMYTRYAAEKGWSVEILSESEGTMGGYKEIVAALHGRGAYARLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +++ R HTS +++ V P + ++++I+E+D RID YRA GAGGQHVN T+SAV Sbjct: 186 QRVPATETSGRIHTSAATVAVLP-EAEDVDVDINEADLRIDVYRAQGAGGQHVNKTESAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PT VV Q ERSQH+NKA+A +LRA+L + E QK+E A K ++G G Sbjct: 245 RITHLPTNTVVAVQDERSQHRNKARAMALLRARLLDDERQKKE--AGRAAERKGQVGSGD 302 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIKK 355 +IR+Y P V D R N+ +V+ G LD+ + L + Sbjct: 303 RSERIRTYNF-PQGRVTDHRINLTLYKLDEVIAGTALDEIIDPLLTEHQ 350 >gi|315638047|ref|ZP_07893232.1| peptide chain release factor RF1 [Campylobacter upsaliensis JV21] gi|315481895|gb|EFU72514.1| peptide chain release factor RF1 [Campylobacter upsaliensis JV21] Length = 355 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 116/340 (34%), Positives = 185/340 (54%), Gaps = 9/340 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 +R LNT D + ++ + L +E+++L+ + K+ + L L + + Sbjct: 11 KRYEELNTLLSDTKIINDIEKMTSLSKEQKNLEPIVLKTKDYFNTLTQIEDNKALLNDPE 70 Query: 81 DCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139 + +E NL+ K+ E + L D + +LE+ AG GG E+ + L++ Sbjct: 71 FSELAKEELKNLEEAKINFEEEIKILLLPKDPNDEKNIFLEIRAGTGGDEASLFVGDLVK 130 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 Y R+A+ R +K E + +G G K +L+KG AY LK E G HR+ RI +S Sbjct: 131 AYARYADLRGYKIEIVSSSEGSAGGFKELIMLVKGTGAYSRLKFESGTHRVQRIPQTESQ 190 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS ++ + P D IEI+I+ +D +ID R+SG GGQ VNTTDSAVRITHIP+G+ Sbjct: 191 GRIHTSAITVAIMP-EVDDIEIQINPNDLKIDVMRSSGHGGQSVNTTDSAVRITHIPSGL 249 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316 VV Q +SQHKNK A +L+A+LY E+Q+ E +A E+ K+++G G +IR+Y Sbjct: 250 VVVNQDGKSQHKNKESAMKILKARLY--EMQESERLAKESEARKSQVGSGDRSERIRTYN 307 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLAIKK 355 P + D R N+ +++G L D+ ++ +A + Sbjct: 308 F-PQNRISDHRINLTLYRLDAIMEGGLFDELIEPLIAHHQ 346 >gi|225621133|ref|YP_002722391.1| peptide chain release factor 1 [Brachyspira hyodysenteriae WA1] gi|254790865|sp|C0QWA1|RF1_BRAHW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|225215953|gb|ACN84687.1| peptide chain release factor 1 [Brachyspira hyodysenteriae WA1] Length = 358 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 115/353 (32%), Positives = 183/353 (51%), Gaps = 14/353 (3%) Query: 12 GLFDWDNAVQR-LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + D + V++ + K D ++ ++ + LM+++ +++ + K+++ L + Sbjct: 2 SIIDKLSLVEKTYEDIVQKLNDANI-KDNRVIQDLMKKKSEIEDIVEEYKKLKVVLKEIE 60 Query: 71 ILLELALEEDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 E+ D L++ D Q+ + V + L + D + +E+ G Sbjct: 61 ESNEMVNNPDTDKELKDMALLEIEDLNQKKEDIVNGLRLLLLPKDKNDGKNIIVEIRVGT 120 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG ES + L RMYTR+ E+ K E ++ E G K + G +AY LK E Sbjct: 121 GGDESALFVGDLFRMYTRFIERTNLKMEIIDTSPTELGGYKEVIFSVSGKDAYRTLKFES 180 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G HR+ RI +S R HTS S++ V P +S + I + D R+D +R+SG GGQ VNT Sbjct: 181 GTHRVQRIPATESGGRIHTSASTVAVMPEAMESDVV-IKDEDIRVDIFRSSGPGGQSVNT 239 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITH+PTG+VVQCQ E+SQHKNKA+A +LRA++YE E +R A + + + Sbjct: 240 TDSAVRITHLPTGLVVQCQDEKSQHKNKAKALKVLRARIYEKEEAER--KAKEAKERREQ 297 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IG G +IR+Y P V D R N+ +DG++ + A ++ Sbjct: 298 IGSGDRSERIRTYNF-PQNRVTDHRINVTLYKLDRFMDGEITEITDALFKKEQ 349 >gi|139439315|ref|ZP_01772757.1| Hypothetical protein COLAER_01773 [Collinsella aerofaciens ATCC 25986] gi|133775339|gb|EBA39159.1| Hypothetical protein COLAER_01773 [Collinsella aerofaciens ATCC 25986] Length = 355 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 112/334 (33%), Positives = 175/334 (52%), Gaps = 12/334 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++ L K DP + ++ E L +E H + I+ +E L D E+ Sbjct: 5 LEKIIKAYEELEKKLSDPAVASDIKEFTRLNKEYAHQSDLIAASREYIGALDDIEAAKEM 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 + D + ++ + ++ + + + S D + +E+ + AGG E+ Sbjct: 65 LRDTTDADEKEMLQMDISENEEKLPQLEEDIKYMLIPSDPNDDKNTIVEIRSAAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L +MY R+ E R +KT L+ E G KS ++G Y +K E GVHR+ Sbjct: 125 IFAGDLYKMYQRFCESRGWKTTVLDSSPSEAGGFKSIEFKVEGDRVYSVMKFESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R TS +++ V P + I+++I++SD RIDTY ASG GGQ VNTT SAVR Sbjct: 185 RVPKTESQGRIQTSTATVAVLP-EAEEIDVQINQSDLRIDTYCASGPGGQCVNTTYSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---W 308 ITH+PT VVQ Q++RSQ +N+ MLRA+LYE+EL+K++ +G +++IG Sbjct: 244 ITHLPTNTVVQSQEQRSQIQNREVCMQMLRARLYEMELEKQQAE--LGAERQSQIGHGNR 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 +IR+Y QP V D R T + VL GD Sbjct: 302 SEKIRTYN-QPQDRVTDHRIGFNSTY-NGVLLGD 333 >gi|88797976|ref|ZP_01113563.1| peptide chain release factor 2 [Reinekea sp. MED297] gi|88779173|gb|EAR10361.1| peptide chain release factor 2 [Reinekea sp. MED297] Length = 280 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 159/279 (56%), Positives = 210/279 (75%), Gaps = 1/279 (0%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +A+EEDD + + S+ L ++ ++E +F + SGE D ++AYL++ AG+GGTE+QDWA Sbjct: 1 MAVEEDDEGSVADVSEELAGLQRQLEELEFRRMFSGEMDPSNAYLDIQAGSGGTEAQDWA 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 MLLRMY RW E++ FKTE +E G+ AGIKSAT+ +G A+GWL+ E GVHRLVR S Sbjct: 61 EMLLRMYLRWGEEKGFKTELMEASAGDVAGIKSATVRFEGEYAFGWLRTETGVHRLVRKS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+DS +RRHTSFSS++V P +DD++EIEI+ +D RID YRASGAGGQHVN T+SAVRITH Sbjct: 121 PFDSGNRRHTSFSSVFVSPEIDDNVEIEINPADLRIDVYRASGAGGQHVNRTESAVRITH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 PTG+V QCQ +RSQHKNK QA L+AKLYE E+ +R+E A + E +K++IGWG QIRS Sbjct: 181 EPTGIVTQCQNDRSQHKNKDQAMKQLKAKLYEREMLQRQEAAQLVEDNKSDIGWGSQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 YVL +KDLRT +E + VLDG LD F++A+L Sbjct: 241 YVLDD-ARIKDLRTGVENRNTQAVLDGALDPFIEASLKQ 278 >gi|85705322|ref|ZP_01036421.1| peptide chain release factor 1 [Roseovarius sp. 217] gi|85670195|gb|EAQ25057.1| peptide chain release factor 1 [Roseovarius sp. 217] Length = 426 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 109/341 (31%), Positives = 172/341 (50%), Gaps = 14/341 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +R F+ + ++ L RE L + I+ + L D + Sbjct: 85 LQQIAERFEFIEAQMMQGG--GDIAR---LGREYSELRPLVEEIRAYRQILADIEGARAM 139 Query: 76 ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + E R+ Q L EA++ A LE+ G GG E+ +A Sbjct: 140 LGDPEMRDLARDELEVLEARLPGMEAALQLALLPRDEANARPAILEIRPGTGGEEAALFA 199 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L+RMY R+AE R + + +E E GI+ + IKG + LK E GVHR+ R+ Sbjct: 200 ADLMRMYQRYAEARGWVFDVIEEQQSELGGIRELVVHIKGEGVFARLKFESGVHRVQRVP 259 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P + ++++I+ +D RIDT R+SGAGGQHVNTTDSAVRITH Sbjct: 260 ETESGGRIHTSAATVAVLP-EAEDVDVQINPNDLRIDTMRSSGAGGQHVNTTDSAVRITH 318 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IP+G+VV E+SQH+N+ A +L+++L+++E + + + ++G G + Sbjct: 319 IPSGIVVTSS-EKSQHRNREIAMQVLKSRLFDMERSRVDSER--SANRAAQVGSGDRSER 375 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IR+Y P + D R N+ V+ GDLD+ + A A Sbjct: 376 IRTYNF-PQGRMTDHRINLTLYKLEQVMGGDLDEVIDALTA 415 >gi|319899228|ref|YP_004159321.1| peptide chain release factor 1 [Bartonella clarridgeiae 73] gi|319403192|emb|CBI76751.1| peptide chain release factor 1 [Bartonella clarridgeiae 73] Length = 357 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 118/348 (33%), Positives = 180/348 (51%), Gaps = 18/348 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +R + ++ + P N L E L I I+ + + L + Sbjct: 10 KQLEKRFETIESQMAENP----NAETYVKLASEYAELQPIIVLIRALNSLCKEIAELETI 65 Query: 76 ALEEDDCSILQETSDN-----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + ++ + Q+++ + Q L AD +E+ AG GG+E+ Sbjct: 66 ISDTQTDTEMRNLAQEELSSLYQKVQQLEQELQILLLPKDIADEKSVIIEIRAGTGGSEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A +K E + + DGE G K I G + LK E GVHR+ Sbjct: 126 ALFAGNLFRMYERYANTHNWKVEVISLSDGEVGGYKEIIATISGKGVFSKLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 RI ++ R HTS +++ V P + I+IEI D RIDT RASGAGGQHVNTTDSAV Sbjct: 186 QRIPETETGGRIHTSAATVAVLP-EAEEIDIEIRPEDIRIDTMRASGAGGQHVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG++V Q E+SQH+N+A+A +LRA+L+++E QK + S KT++G G Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQK--AESERSASRKTQVGSGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +++GDL++ + A ++ + Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRIMEGDLNELINALISDHQ 348 >gi|225436757|ref|XP_002269884.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296086617|emb|CBI32252.3| unnamed protein product [Vitis vinifera] Length = 411 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 110/350 (31%), Positives = 186/350 (53%), Gaps = 17/350 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++A + L+ K DP + N E + L + LD +S K +D L Sbjct: 53 LESAEKTWKELSVKLADPDIVSNPSEYQKLAQSMAELDEVVSTFKRFKDCEKQLEEAKAL 112 Query: 76 ALEEDDCSILQETS-----DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 A E+ + + E ++K E + L S DS + LEV AG GG E+ Sbjct: 113 AKEDGIDADMAEMIAYEIGTLTNQLKELEENIKVLLLPSDPLDSRNILLEVRAGTGGDEA 172 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L+RMY +++E+ +K + + E+ G K+ L +KG Y LK E GVHR+ Sbjct: 173 GIWAGDLVRMYQKYSERNSWKYAPVSSSEAEKGGFKTYVLEVKGNCVYSKLKYESGVHRV 232 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ + P D +E+ I D + T R+ GAGGQ+VN ++AV Sbjct: 233 QRVPQTETQGRVHTSTATVAIMP-EADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAV 291 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ + C +ER+Q +N+++A +LRAKLYE+++++++E+ I K+++G G Sbjct: 292 DLFHKPTGIRIFCTEERTQLQNRSRALQLLRAKLYEIKVREQQEL--IRNQRKSQVGTGA 349 Query: 310 --RQIRSYVLQPYQMVKDLR--TNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D R N E T LDGD++ +++ +A+++ Sbjct: 350 RAEKIRTYNYKD-NRVTDHRLKMNFELT---SFLDGDIETAVQSCVAMEQ 395 >gi|281425822|ref|ZP_06256735.1| peptide chain release factor 1 [Prevotella oris F0302] gi|281400083|gb|EFB30914.1| peptide chain release factor 1 [Prevotella oris F0302] Length = 370 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 90/359 (25%), Positives = 158/359 (44%), Gaps = 20/359 (5%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + D R ++T DP + + L +E + L + ++ K L Sbjct: 6 SILEKLDGLESRFEEVSTLITDPDVIADQTRYVKLTKEWKDLGDIMNARKRYIACLDSIR 65 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAG 126 ++ E D + + LQ+ + + + D+ + +E+ AG G Sbjct: 66 EAKDILANESDSDMKDMAREELQQNETLQPQLEEEIKLLLIPKEPEDAKNVQMEIRAGTG 125 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L MY R+ + + + ++ +G G K I G + YG +K E G Sbjct: 126 GDEAALFAGDLFNMYKRFCDMKGWTLSVTDVSEGAVGGYKEIDFAISGTDVYGTMKYESG 185 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +SN R TS +++ V P D I+E D + DT+R+SGAGGQ+VN Sbjct: 186 VHRVQRVPVTESNGRMQTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKV 244 Query: 247 DSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 +S VR+ + ++++C + R Q KNK +A + L +++ E QK + +I Sbjct: 245 ESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTFIHDREHQKY--VDDI 302 Query: 299 GESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+ + G + IR+Y P V D R L G++ D + A + Sbjct: 303 ASRRKSLVSTGDRSAKIRTYNF-PQGRVTDHRIGYTTHDLQGFLGGNIQDMIDALTVAE 360 >gi|254438684|ref|ZP_05052178.1| peptide chain release factor 1 [Octadecabacter antarcticus 307] gi|198254130|gb|EDY78444.1| peptide chain release factor 1 [Octadecabacter antarcticus 307] Length = 344 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 111/338 (32%), Positives = 169/338 (50%), Gaps = 12/338 (3%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 +R FL + + L + + RE L + ++ QD + + Sbjct: 2 QITERFEFLEARMGE-GLGGD--AFVSVSREYAELRPVVEVVRHYQDLTEEIEGAQAMLS 58 Query: 78 EEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 + + + + L+ + + AD A LE+ G GG E+ +A Sbjct: 59 DPEMKELAEMELPQLRERLPDAEAAVKLALIPKDAADGKPALLEIRPGTGGDEAALFAGD 118 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 LLRMY R+AE R + E LE E GIK T I G N + +K E GVHR+ R+ Sbjct: 119 LLRMYQRYAESRGWTFEILEESQSELGGIKEVTARIAGNNVFARMKYESGVHRVQRVPET 178 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S R HTS +++ V P + ++I+I+ +D RIDT RASG+GGQHVNTTDSAVRITH+P Sbjct: 179 ESGGRIHTSAATVAVLP-EAEDVDIQINANDIRIDTMRASGSGGQHVNTTDSAVRITHMP 237 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 +G+VV E+SQH+N+ A +L+ +LY+ E QK + ++G G +IR Sbjct: 238 SGIVVTSS-EKSQHRNREIAMQVLKTRLYDAERQKVHDER--SADRAAQVGSGDRSERIR 294 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +Y P + D R N+ +L GDLD+ + + Sbjct: 295 TYNF-PQGRMTDHRINLTLYKLDAILQGDLDEVIDGLI 331 >gi|312865182|ref|ZP_07725410.1| peptide chain release factor 1 [Streptococcus downei F0415] gi|311099293|gb|EFQ57509.1| peptide chain release factor 1 [Streptococcus downei F0415] Length = 359 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 99/348 (28%), Positives = 161/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L RE ++ +E + L E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMQLSREEASSRETVTVYREYKQILQAISDAEEM 66 Query: 76 ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E L+E + + + E + L D + LE+ AGG E+ Sbjct: 67 IKEAGGDPELEEMAKEELKDSKIAKEDYEEKMKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLNMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+ HIPTG+ V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G +D+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVLYDQ 350 >gi|240849863|ref|YP_002971251.1| peptide chain release factor 1 [Bartonella grahamii as4aup] gi|240266986|gb|ACS50574.1| peptide chain release factor 1 [Bartonella grahamii as4aup] Length = 358 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 116/347 (33%), Positives = 182/347 (52%), Gaps = 18/347 (5%) Query: 18 NAVQRLSFLNTKTE-DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 +R + + +P N L E L I+ I+ + + L + Sbjct: 11 QLEKRFEIIERQMTTNP----NAETYVKLASEYAELQPVIASIRALNALYKEITELETII 66 Query: 77 LEEDDCSILQETSDN-----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ++ ++ + ++++ + Q L AD +A +E+ AG GG+E+ Sbjct: 67 NDKQTDVEMRNLAQEELPLLYKKVEQFEKELQILLLPKDVADEKNAIVEIRAGTGGSEAA 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 ++ L RMY R+A +K E + + +GE G K I G + LK E GVHR+ Sbjct: 127 LFSGDLFRMYERYAHAHHWKVEVISLSEGEVGGYKEIIATISGKGVFSKLKYESGVHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI ++ R HTS +++ V P + I+I+I D RIDT RASGAGGQHVNTTDSAVR Sbjct: 187 RIPETETGGRIHTSAATVAVLP-EAEEIDIDIRPEDIRIDTMRASGAGGQHVNTTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIPTG++V Q E+SQH+N+A+A +LRA+L+++E QK + S K+++G G Sbjct: 246 ITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQK--AESERSASRKSQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +L+GDLD+ + A ++ + Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLYKLDRILEGDLDELLHALISDHQ 348 >gi|210634612|ref|ZP_03298189.1| hypothetical protein COLSTE_02111 [Collinsella stercoris DSM 13279] gi|210158740|gb|EEA89711.1| hypothetical protein COLSTE_02111 [Collinsella stercoris DSM 13279] Length = 355 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 113/341 (33%), Positives = 171/341 (50%), Gaps = 13/341 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L K DP + ++ E L +E H + + +E L D E+ Sbjct: 5 LEKIIIAFEELEKKLSDPSIASDIKEFTRLNKEYAHQTDLVKAAREYLGALDDIEAAKEM 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + ++ + + D D +E+ + AGG E+ Sbjct: 65 LREATDADEKEMLQMEISENEAKLPQLEEDIKIMLIPGDPMDEKDTIVEIRSAAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L +MY R+ E +K+K E L+ + G KS + G Y +K E GVHR+ Sbjct: 125 IFAGDLFKMYQRFIESKKWKMEVLDSSPSDAGGFKSIEFKVTGDRVYSVMKYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R TS +++ V P D I+++I++SD RIDTY ASG GGQ VNTT SAVR Sbjct: 185 RVPKTESQGRIQTSTATVAVLP-EADEIDVQINQSDLRIDTYCASGPGGQCVNTTYSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---W 308 ITH+PT VVQ Q++RSQ +N+ MLRA+LYE+EL+K++ +G +IG Sbjct: 244 ITHLPTNTVVQSQEQRSQIQNREVCMQMLRARLYEMELEKQQAE--LGAERSAQIGHGNR 301 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMK 348 +IR+Y QP V D R T + VL GD L ++ Sbjct: 302 SEKIRTYN-QPQDRVTDHRIGFNSTY-NGVLLGDQLSSVIE 340 >gi|87124992|ref|ZP_01080839.1| peptide chain release factor [Synechococcus sp. RS9917] gi|86167312|gb|EAQ68572.1| peptide chain release factor [Synechococcus sp. RS9917] Length = 365 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 102/348 (29%), Positives = 163/348 (46%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + A L + DP + + + + RER L+ + +Q + L Sbjct: 10 LEAASTSFRNLERQLADPDVAADPKRLETIARERSRLEPLVQDFASLQQVESERDQAKAL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE-----YKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + +QE + L + D LE+ AGAGG E+ Sbjct: 70 LRESREDPAMQELAQQELDQLEVRRSALLEQLTLALLPTDPRDGRSVMLEIRAGAGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY R+ ++ + + + + + G + L +KG + LK E GVHR+ Sbjct: 130 CLWAGDLARMYERYGTRQHWTVQPVSANAADLGGYRELILSVKGEAVFSKLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P D +E++I ++ I T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADPVEVQIDPTELEISTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ V C QERSQ +N+ +A +LRAKLY E Q E A + + ++G G Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERALEILRAKLY--ERQLAEANARESSARRAQVGTGD 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D R VL+G LD+ + A +A ++ Sbjct: 307 RSEKIRTYNAKD-NRVTDHRLGRNFG-LDPVLEGQLDEVIGACIAEEQ 352 >gi|293399752|ref|ZP_06643898.1| peptide chain release factor 1 [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306152|gb|EFE47395.1| peptide chain release factor 1 [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 358 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 107/346 (30%), Positives = 174/346 (50%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V R + P + + E L RE+ L + ++ + + EL Sbjct: 8 LEGMVNRYHEITELMMQPDIVSDSRELAKLGREQADLTQVVETYQDYKHSMEALEEAKEL 67 Query: 76 ALEEDDC---SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 EED E + +I+ + + + DS++A +E+ AGG E Sbjct: 68 LKEEDKEIKEMAKMEIEELEPKIEEYLGKLEILLIPKDPNDSHNAIVEIRGAAGGDEGNI 127 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AE + +K E +E+ D E G + ++KG YG LK E G HR+ R Sbjct: 128 FAGDLYRMYSKYAESQGWKIEIVEMDDSEAGGFSLVSFMVKGDGVYGKLKFESGSHRVQR 187 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS +++ V P ++ + +I +D I+T R+SGAGGQH+N TDSAVRI Sbjct: 188 VPKTESQGRIHTSTATVLVTP-EIEAEDFDIDMNDLEIETMRSSGAGGQHINKTDSAVRI 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 H PTG+ V+CQ RSQH+N+A A +R+++YE +K EE + +++IG G Sbjct: 247 VHKPTGITVKCQDGRSQHENRATALMTIRSRVYEEHQRKLEEEQGM--ERRSKIGTGDRA 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R +++G + D + A + + Sbjct: 305 EKIRTYNY-PQNRVTDHRIGYTVNQLDRIMEGKMQDLLDALTSADQ 349 >gi|289643112|ref|ZP_06475242.1| peptide chain release factor 1 [Frankia symbiont of Datisca glomerata] gi|289507076|gb|EFD28045.1| peptide chain release factor 1 [Frankia symbiont of Datisca glomerata] Length = 356 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 112/345 (32%), Positives = 175/345 (50%), Gaps = 10/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + + L ++ DP + + A+ L R L A+ +E+ D E Sbjct: 5 LDALLTEHAELESRLADPSVHADPALARSLGRRYAELTPAVETARELDRVAADLATAREF 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A E+ + Q + + D+ DA LE+ AGAGG ES +A Sbjct: 65 AAEDTSFRAEVAELEAEQETLRNRLRAHL--VPTDPDDARDAILEIKAGAGGEESALFAG 122 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL-----LIKGPNAYGWLKGEQGVHRL 190 LLRMY R+AE+R ++TE L+ + + G + ++ +G L+ E GVHR+ Sbjct: 123 DLLRMYLRYAERRGWRTEILDANPSDLGGYRDVSVAVKAGRGASEGVFGRLRFEGGVHRV 182 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS + + V P +E++I +D RID YR+SG GGQ VNTTDSAV Sbjct: 183 QRVPVTESAGRIHTSAAGVLVLP-EAADVEVDIDPNDLRIDVYRSSGPGGQSVNTTDSAV 241 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+P+G+VV CQ E+SQ +NK A +LRA+L + ++ + A+ +S+ + Sbjct: 242 RITHLPSGLVVSCQNEKSQLQNKESALRILRARLLSVARERAQAEASAARASQVRTVDRS 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 ++R+Y + D R + + VLDG+LDD + A +A Sbjct: 302 ERVRTYNFA-ENRISDHRVGYKAYNLDQVLDGELDDVLNALIAAD 345 >gi|260592403|ref|ZP_05857861.1| peptide chain release factor 1 [Prevotella veroralis F0319] gi|260535639|gb|EEX18256.1| peptide chain release factor 1 [Prevotella veroralis F0319] Length = 370 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 92/354 (25%), Positives = 157/354 (44%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R ++T DP + + L +E + L + + K L ++ Sbjct: 11 LDGLEARYEEVSTLITDPSVIADQSRYVKLTKEYKDLGDIMDARKRYITCLTTIKEAKDI 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + L + + + D+ + +E+ GAGG E+ Sbjct: 71 IANESDAEMKEMAREELAENEELQPRLEEEIKILLVPKDPEDAKNVQMEIRGGAGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MY R+ +K+ +K + +G G K ++G N YG LK E GVHR+ Sbjct: 131 LFAGDLFNMYKRYCDKKGWKLSITSVSEGAVGGFKEIDFAVEGENVYGTLKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P D I+E D + DT+R+SGAGGQ+VN +S VR Sbjct: 191 RVPATETQGRMHTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKVESGVR 249 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + + ++++C + R Q KNK +A + L +Y+ E QK I +I K Sbjct: 250 LRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTYIYDHEHQKY--IDDIASRRK 307 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 T + G + IR+Y P V D R ++G++ + + A + Sbjct: 308 TLVSTGDRSAKIRTYNF-PQGRVTDHRIGFTTHDLQGFMNGEIQEMIDALTVAE 360 >gi|33519726|ref|NP_878558.1| peptide chain release factor 2 [Candidatus Blochmannia floridanus] gi|33504071|emb|CAD83332.1| peptide chain release factor 2 (RF-2) [Candidatus Blochmannia floridanus] Length = 365 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 147/343 (42%), Positives = 213/343 (62%), Gaps = 2/343 (0%) Query: 10 LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 L +FD + + L + K + +W ++ + +N + + L D Sbjct: 17 LRIVFDCNVQKELLKKIIVKLKSVDIWSSLSHNMTADGQCNSFENIGELVNYMVKDLQDL 76 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L+++ + D I + + ++ + + + S + D + Y+++ +G+GGTE Sbjct: 77 SDLIKIVVHNDSLLINEIQEQLIHIDRI-LFQLEMCQMFSKKYDDCNCYVDIQSGSGGTE 135 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 +QDWANMLLRMY +W + + F E + G+ +GIKS T+ + GP YGWL+ E G+HR Sbjct: 136 AQDWANMLLRMYLKWIDNKGFNVEIVTESCGDFSGIKSTTIKVIGPYVYGWLRTESGIHR 195 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 LVR SP+D+ +RHTSF+S++VYP +DD+I+I+I D RID YRASGAGGQHVN T+SA Sbjct: 196 LVRKSPFDATGKRHTSFASVFVYPELDDNIDIQIRPEDLRIDVYRASGAGGQHVNRTESA 255 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPT +V QCQ +RSQHKNK QA L+AKLY EL K+ I E+ K +I WG Sbjct: 256 VRITHIPTNIVTQCQSDRSQHKNKNQAIKQLKAKLYNFELHKKRIEKKIRENKKKDITWG 315 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL + +KDLRT +EK + VL+GDLDDF+K ++ Sbjct: 316 NQIRSYVLD-HSRIKDLRTGLEKHNVKAVLNGDLDDFIKTSIK 357 >gi|307327906|ref|ZP_07607088.1| peptide chain release factor 1 [Streptomyces violaceusniger Tu 4113] gi|306886424|gb|EFN17428.1| peptide chain release factor 1 [Streptomyces violaceusniger Tu 4113] Length = 359 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 116/350 (33%), Positives = 180/350 (51%), Gaps = 16/350 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + + + L + DP + + EA+ L + L I+ + + D Sbjct: 1 MFEAVEELIGEHADLEKRLADPAVHADQREARRLNKRYAELTPVIAAYRAWKQAGEDIET 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EL +DD ++E + Q + + + + +D D LEV AG GG ES Sbjct: 61 AREL--AQDDPDFVEEAKELEQSREGLTDRLRLLLVPRDPSDDKDIILEVKAGEGGEESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG----------PNAYGWL 181 +A LLRMY R+AE+ +KTE L+ ++ + G K + +K + L Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEILDANESDLGGYKDVQVAVKTKGGNGATEPGQGVWARL 178 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHR+ R+ +S R HTS + + V P + +E+EI +D RID YR+SG GGQ Sbjct: 179 KYEGGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEVEVEIGPNDLRIDVYRSSGPGGQ 237 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITH+PTG+VV CQ E+SQ +NK QA +LR++L ++ E A+ Sbjct: 238 SVNTTDSAVRITHLPTGIVVSCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREASDARR 297 Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 S+ + +IR+Y P + D R + + VLDG+L+ ++A Sbjct: 298 SQVRTVDRSERIRTYNY-PENRISDHRVGFKAYNLDQVLDGELEPVIQAC 346 >gi|302346475|ref|YP_003814773.1| peptide chain release factor 1 [Prevotella melaninogenica ATCC 25845] gi|302150829|gb|ADK97090.1| peptide chain release factor 1 [Prevotella melaninogenica ATCC 25845] Length = 370 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 91/354 (25%), Positives = 158/354 (44%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R ++T DP + + L +E + L + + + + L ++ Sbjct: 11 LDGLEARYEEVSTLITDPSVIADQSRYVKLTKEYKDLGDIMDARRRYINCLTTIKEAKDI 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + L + + + D+ + +E+ GAGG E+ Sbjct: 71 IANESDAEMKEMAREELSENEALQPALEEEIKLLLVPKDPEDAKNVQMEIRGGAGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MY R+ +K+ +K + +G G K ++G N YG LK E GVHR+ Sbjct: 131 LFAGDLFNMYKRYCDKKGWKLSITSVSEGTAGGFKEIDFAVEGDNVYGTLKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P D I+E D + DT+R+SGAGGQ+VN +S VR Sbjct: 191 RVPATETQGRMHTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKVESGVR 249 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + + ++++C + R Q KNK +A + L +Y+ E QK + +I K Sbjct: 250 LRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTYIYDHEHQKY--VDDIASRRK 307 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 T + G + IR+Y P V D R ++G++ D + A + Sbjct: 308 TLVSTGDRSAKIRTYNY-PQGRVTDHRIGFTTHDLQGFMNGEIQDMIDALTVAE 360 >gi|229818480|ref|ZP_04448761.1| hypothetical protein BIFANG_03788 [Bifidobacterium angulatum DSM 20098] gi|229784350|gb|EEP20464.1| hypothetical protein BIFANG_03788 [Bifidobacterium angulatum DSM 20098] Length = 362 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 106/349 (30%), Positives = 169/349 (48%), Gaps = 16/349 (4%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 A++ L + P + + + + L R L + ++ K D E+A Sbjct: 10 QAALKEYQSLEEQMASPEVVTDPNKMRKLGRRHAELGSIVTAYKAYLAVKNDLEAAREMA 69 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 E+ D + + ++ E + D+ D +E+ AG GG E+ +A Sbjct: 70 SEDPDFAAEAKRLESELPDVEEKLRTAL--IPRDPDDARDTIMEIKAGTGGEEAALFAGD 127 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHR 189 LLRMYTR+AEKR + + E G+K + I + LK E GVHR Sbjct: 128 LLRMYTRYAEKRGWTVSVQSENTTELGGVKDVQVAIRAKGTPAPEDGVWASLKYEGGVHR 187 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 + R+ +S R TS + + V+P DD+ EI+I D +ID + +SG GGQ VNTT S Sbjct: 188 VQRVPVTESQGRIQTSAAGVIVFPEADDDNDEIDIDPKDLKIDIFMSSGPGGQSVNTTYS 247 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI-- 306 AVR+THIPTG+VV Q E+SQ +N+A A +L+++L L ++ +E A + +++ Sbjct: 248 AVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRS 305 Query: 307 -GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RTN + + VLDGDL + + + Sbjct: 306 LDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 353 >gi|76788237|ref|YP_329784.1| peptide chain release factor 1 [Streptococcus agalactiae A909] gi|77405475|ref|ZP_00782567.1| peptide chain release factor 1 [Streptococcus agalactiae H36B] gi|119361618|sp|Q3K119|RF1_STRA1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|76563294|gb|ABA45878.1| peptide chain release factor 1 [Streptococcus agalactiae A909] gi|77175872|gb|EAO78649.1| peptide chain release factor 1 [Streptococcus agalactiae H36B] Length = 359 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 97/348 (27%), Positives = 165/348 (47%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L RE + ++ +E + + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQNISDAEEM 66 Query: 76 ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + L+E + + + E + L D + LE+ AGG E+ Sbjct: 67 IKDASGDAELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E EI + D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYEIDQKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+ HIPTG+ V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ +G G Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G +D+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQ 350 >gi|120434841|ref|YP_860527.1| peptide chain release factor 1 [Gramella forsetii KT0803] gi|166223562|sp|A0LYL5|RF1_GRAFK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|117576991|emb|CAL65460.1| peptide chain release factor 1 [Gramella forsetii KT0803] Length = 358 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 98/346 (28%), Positives = 164/346 (47%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + QR +N P + + L +E + L + ++ + E+ Sbjct: 5 LNIVKQRFDEVNDLIIQPDVISDQKRYIELNKEYKDLRALMDEREKYISITDNIQEAEEI 64 Query: 76 ALEEDDCSILQETSDNLQRIK----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 + D + + L K + + + D + +E+ AG GG E+ Sbjct: 65 ISDGSDPEMTEMAKLQLDEAKGQLPALEDKIRMMLIPKDPEDGKNIVMEIRAGTGGDEAS 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYT++ E R + ++ +G G K + G + YG +K E GVHR+ Sbjct: 125 IFAGDLYRMYTKYVEGRGWSHNIVDFSEGTSGGFKEMIFEVSGDDVYGTMKFEAGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P ++ I + RID + +SG GGQ VNTT SAVR Sbjct: 185 RVPQTETQGRVHTSAATVMVLPEAEEFDVE-IDPKEVRIDYFCSSGPGGQSVNTTYSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +TH PTG+V QCQ ++SQHKNK +A+ +LR++LYE+EL K+ E + + G + Sbjct: 244 LTHEPTGLVAQCQDQKSQHKNKEKAFRVLRSRLYEMELAKKME--ADAAKRNSMVSSGDR 301 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y V D R N+ S++++GD+ + + Sbjct: 302 SAKIRTYNYA-QSRVTDHRINLTLYDLSNIINGDIQKIIDELQLAE 346 >gi|15675118|ref|NP_269292.1| peptide chain release factor 1 [Streptococcus pyogenes M1 GAS] gi|20139346|sp|Q99ZP5|RF1_STRP1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|13622277|gb|AAK34013.1| putative peptide chain release factor 1 [Streptococcus pyogenes M1 GAS] Length = 359 Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats. Identities = 96/348 (27%), Positives = 162/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L RE + ++ +E + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSREETNTRETVTAYREYKQVIQTISDAEEM 66 Query: 76 ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + L+E + + + E + L D + LE+ AGG E+ Sbjct: 67 IKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+ HIPTG+ V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ +G G Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G +D+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQ 350 >gi|332290785|ref|YP_004429394.1| peptide chain release factor 1 [Krokinobacter diaphorus 4H-3-7-5] gi|332168871|gb|AEE18126.1| peptide chain release factor 1 [Krokinobacter diaphorus 4H-3-7-5] Length = 359 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 95/343 (27%), Positives = 166/343 (48%), Gaps = 12/343 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLIL 72 QR ++ P + + L +E L E+ + L + + Sbjct: 5 LQIVKQRFDEISDLIIQPDIITDQKRYVQLNKEYSDLKALMEVREVYIELSENLKEAEEI 64 Query: 73 LELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 + + + + + + + E + + D+ + +E+ AG GG E+ Sbjct: 65 IADGSDAEMVEMAKMQYEEAKTGIPELEEKIRMMLIPKDPEDAKNVVVEIRAGTGGDEAS 124 Query: 132 DWANMLLRMYTRWAEKR-KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMYT++ + +K ++ +G G K I G + YG +K E GVHR+ Sbjct: 125 IFAGDLYRMYTKYVDSVPGWKHSTVDYSEGTSGGFKEIQFEITGQDVYGTMKFEAGVHRV 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P ++ I D R+D + +SG GGQ VNTT SAV Sbjct: 185 QRVPQTETQGRVHTSAATVMVLPEAEEFDVQ-IEPKDVRVDFFCSSGPGGQSVNTTYSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+THIPTG+V QCQ ++SQHKNK +A+ +LR++LY++EL K++E +++ G Sbjct: 244 RLTHIPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDMELAKKQEE--DAAKRNSQVSSGD 301 Query: 311 Q---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 + IR+Y P V D R + ++++GD+ ++ Sbjct: 302 RSAKIRTYNY-PQGRVTDHRIGLTLYDLQNIVNGDIQKILEEL 343 >gi|288802476|ref|ZP_06407915.1| peptide chain release factor 1 [Prevotella melaninogenica D18] gi|288335004|gb|EFC73440.1| peptide chain release factor 1 [Prevotella melaninogenica D18] Length = 370 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 91/354 (25%), Positives = 159/354 (44%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R ++T DP + + L +E + L + + + + L ++ Sbjct: 11 LDGLEARYEEVSTLITDPSVIADQSRYVKLTKEYKDLGDIMDARRRYINCLTTIKEAKDI 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E+D + + + L + + + D+ + +E+ GAGG E+ Sbjct: 71 ITNENDAEMKEMAREELSENEALQPALEEEIKLLLVPKDPEDAKNVQMEIRGGAGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MY R+ +K+ +K + +G G K ++G N YG LK E GVHR+ Sbjct: 131 LFAGDLFNMYKRYCDKKDWKLSITSVSEGTAGGFKEIDFAVEGDNVYGTLKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P D I+E D + DT+R+SGAGGQ+VN +S VR Sbjct: 191 RVPATETQGRMHTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKVESGVR 249 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + + ++++C + R Q KNK +A + L +Y+ E QK + +I K Sbjct: 250 LRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTYIYDHEHQKY--VDDIASRRK 307 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 T + G + IR+Y P V D R ++G++ D + A + Sbjct: 308 TLVSTGDRSAKIRTYNY-PQGRVTDHRIGFTTHDLQGFMNGEIQDMIDALTVAE 360 >gi|322373126|ref|ZP_08047662.1| peptide chain release factor 1 [Streptococcus sp. C150] gi|321278168|gb|EFX55237.1| peptide chain release factor 1 [Streptococcus sp. C150] Length = 359 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 98/348 (28%), Positives = 163/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L RE + ++ +E + + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPEVVSDTKRFMELSREEANTRETVTVYREYKQVIQNITDAEEM 66 Query: 76 ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E L+E + + + E + L D + LE+ AGG E+ Sbjct: 67 IKEASGDPDLEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLNMYQKYAETQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + ++ EI D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVDYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+ HIPTG+ V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ +G G Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350 >gi|239917332|ref|YP_002956890.1| bacterial peptide chain release factor 1 (bRF-1) [Micrococcus luteus NCTC 2665] gi|281414188|ref|ZP_06245930.1| bacterial peptide chain release factor 1 (bRF-1) [Micrococcus luteus NCTC 2665] gi|239838539|gb|ACS30336.1| bacterial peptide chain release factor 1 (bRF-1) [Micrococcus luteus NCTC 2665] Length = 369 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 108/358 (30%), Positives = 170/358 (47%), Gaps = 17/358 (4%) Query: 13 LFD-------WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 +FD D + L + DP + Q+ A+ L R L ++ + Sbjct: 1 MFDSEQRREAVDRLLAEHRELTARLSDPAVHQDPALARRLNRRFAELGAVVTAHRAWSAA 60 Query: 66 LCDNLILLELALEEDDCSILQETSD--NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + ELA DD + E + + D+ D LE+ Sbjct: 61 AEELADARELAAAGDDDAAAFAAEVPGLEAAEAEAAERLRRLLIPRDPDDARDVILEIKG 120 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI------KGPNA 177 G GG E+ +A LLRMY R+A+ R +KTE L + G K + + Sbjct: 121 GEGGEEAALFAGDLLRMYLRYADSRGWKTEVLSATHSDLGGYKDVHVAVRGSAADPADGV 180 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 Y LK E GVHR+ R+ +S R HTS + + V P VD E+ + +D ++D +R+SG Sbjct: 181 YARLKFEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEVDAPDEVHLDPNDLKVDVFRSSG 240 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQ VNTTDSAVR+TH+PTG+VV Q E+SQ +N+ A +LR++L E + +++ + Sbjct: 241 PGGQSVNTTDSAVRLTHLPTGIVVSMQNEKSQIQNREAALRVLRSRLLERQRAEQDAEDS 300 Query: 298 IGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +++ + +IR+Y P + D RT + + VLDGDL+ + + LA+ Sbjct: 301 AARAAQVRTMDRSERIRTYNF-PENRIADHRTGYKAHNLDAVLDGDLEAVIASCLALD 357 >gi|94988610|ref|YP_596711.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS9429] gi|94990486|ref|YP_598586.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS10270] gi|94992434|ref|YP_600533.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS2096] gi|94994408|ref|YP_602506.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS10750] gi|139473768|ref|YP_001128484.1| peptide chain release factor 1 [Streptococcus pyogenes str. Manfredo] gi|119361619|sp|Q1JBR9|RF1_STRPB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361620|sp|Q1JLQ2|RF1_STRPC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361621|sp|Q1JGV2|RF1_STRPD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361622|sp|Q1J6M1|RF1_STRPF RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223610|sp|A2REH9|RF1_STRPG RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|94542118|gb|ABF32167.1| bacterial peptide chain release factor 1 (RF-1) [Streptococcus pyogenes MGAS9429] gi|94543994|gb|ABF34042.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Streptococcus pyogenes MGAS10270] gi|94545942|gb|ABF35989.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Streptococcus pyogenes MGAS2096] gi|94547916|gb|ABF37962.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Streptococcus pyogenes MGAS10750] gi|134272015|emb|CAM30254.1| peptide chain release factor 1 [Streptococcus pyogenes str. Manfredo] Length = 359 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 96/348 (27%), Positives = 163/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L RE + ++ +E + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQTISDAEEM 66 Query: 76 ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + L+E + + + E + L D + LE+ AGG E+ Sbjct: 67 IKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I + D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDQKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+ HIPTG+ V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ +G G Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G +D+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQ 350 >gi|325281736|ref|YP_004254278.1| Peptide chain release factor 1 [Odoribacter splanchnicus DSM 20712] gi|324313545|gb|ADY34098.1| Peptide chain release factor 1 [Odoribacter splanchnicus DSM 20712] Length = 368 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 91/350 (26%), Positives = 165/350 (47%), Gaps = 19/350 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R + DP + Q++ L +E + L+ + + L ++ Sbjct: 9 LETYYIRFKEIGQLITDPEVIQDMERYVRLTKEYKELETITRTADKFKAALLSVEESKDI 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 L E+D + + ++ ++ ++ + + + DS + LE+ G GG E+ Sbjct: 69 LLHEEDKELREMAEMEIEELEDKLPGMEQELKLLLVPADPDDSKNVILEIRGGTGGDEAC 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY ++ E++ +K E ++G G K + G YG +K E GVHR+ Sbjct: 129 LFAGDLFRMYAKFCERKGWKVEVTNANEGTAGGYKEIVASVTGKGVYGIMKYESGVHRVQ 188 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P + I+E + DT+R+ GAGGQ+VN +S VR Sbjct: 189 RVPATETQGRVHTSAATVAVLPEAEAFEVE-INEGAIKWDTFRSGGAGGQNVNKVESGVR 247 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + ++ ++++C + R Q KNK +A + LR +Y+ E QK I +I K Sbjct: 248 LRYVWQNPNTGVAEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDISAKRK 305 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 T + G + IR+Y P V D R N + V+DG++D+ ++ Sbjct: 306 TMVSTGDRSAKIRTYNY-PQGRVTDHRINFTLYNLQAVMDGEIDEIIEKL 354 >gi|295394649|ref|ZP_06804868.1| peptide chain release factor RF1 [Brevibacterium mcbrellneri ATCC 49030] gi|294972542|gb|EFG48398.1| peptide chain release factor RF1 [Brevibacterium mcbrellneri ATCC 49030] Length = 359 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 120/335 (35%), Positives = 180/335 (53%), Gaps = 6/335 (1%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 + + + + +P + N A+ L R LD +E+ L D ELA Sbjct: 14 SLLDEHERIEAELANPDVHANAGLARKLTRRYSELDQIAKTYRELNQCLSDVEDAKELAS 73 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 E+ + ++ + I++ + + + D+ DA +EV AG GG ES +A L Sbjct: 74 EDPAFAEEAKSLEER--IEVLQDKLRELLIPKDPDDARDAIIEVKAGEGGDESALFAGDL 131 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN--AYGWLKGEQGVHRLVRISP 195 +RMY RWA+ R + TE L+ + G K T+ IK YGWLK E GVHR+ R+ Sbjct: 132 VRMYQRWADHRGWSTEVLDSTEANLGGYKDITIAIKSREGGVYGWLKFEGGVHRVQRVPV 191 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS + + V+P VD+ EI++ ++D +ID YR+SG GGQ VNTTDSAVRITH+ Sbjct: 192 TESQGRIHTSAAGVLVFPEVDEPEEIQLDDNDLKIDVYRSSGPGGQSVNTTDSAVRITHL 251 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRS 314 PTG+V CQ E+SQ +NK A MLRA++ + ++ AN S+ + +IR+ Sbjct: 252 PTGIVASCQNEKSQLQNKEAAMRMLRARILAKQAEEAAAEANDMRRSQVRTVDRSERIRT 311 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 Y P + D RT + + VLDG LDD +++ Sbjct: 312 YNF-PENRIVDHRTGFKAYNLDQVLDGRLDDVVES 345 >gi|299140684|ref|ZP_07033822.1| peptide chain release factor 1 [Prevotella oris C735] gi|298577650|gb|EFI49518.1| peptide chain release factor 1 [Prevotella oris C735] Length = 370 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 90/359 (25%), Positives = 158/359 (44%), Gaps = 20/359 (5%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + D R ++T DP + + L +E + L + ++ K L Sbjct: 6 SILEKLDGLESRFEEVSTLITDPDVIADQTRYVKLTKEWKDLGDIMNARKRYIACLDSIR 65 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAG 126 ++ E D + + LQ+ + + + D+ + +E+ AG G Sbjct: 66 EAKDILANESDSDMKDMAREELQQNETLQPQLEEEIKLLLIPKDPEDAKNVQMEIRAGTG 125 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L MY R+ + + + ++ +G G K I G + YG +K E G Sbjct: 126 GDEAALFAGDLFNMYKRFCDMKGWTLSVTDVSEGAVGGYKEIDFAISGTDVYGTMKYESG 185 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +SN R TS +++ V P D I+E D + DT+R+SGAGGQ+VN Sbjct: 186 VHRVQRVPVTESNGRMQTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKV 244 Query: 247 DSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 +S VR+ + ++++C + R Q KNK +A + L +++ E QK + +I Sbjct: 245 ESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTFIHDREHQKY--VDDI 302 Query: 299 GESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K+ + G + IR+Y P V D R L G++ D + A + Sbjct: 303 ANRRKSLVSTGDRSAKIRTYNF-PQGRVTDHRIGYTTHDLQGFLGGNIQDMIDALTVAE 360 >gi|23335569|ref|ZP_00120804.1| COG0216: Protein chain release factor A [Bifidobacterium longum DJO10A] gi|189440751|ref|YP_001955832.1| peptide chain release factor 1 [Bifidobacterium longum DJO10A] gi|238692046|sp|B3DR51|RF1_BIFLD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189429186|gb|ACD99334.1| Protein chain release factor A [Bifidobacterium longum DJO10A] Length = 362 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 103/345 (29%), Positives = 163/345 (47%), Gaps = 16/345 (4%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + + + P + N + + L R L + K D E+A E+ Sbjct: 14 EEYQSIEEQMASPEVVSNPDKLRKLGRRHAELGAIVDAYKAWLQVKDDLAAAQEMAGEDA 73 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D + + ++ E + D+ D +E+ AG GG E+ +A LLRM Sbjct: 74 DFAEEAKRLEDELPGVEEKLRTAL--IPRDPDDARDTIMEIKAGTGGEEAALFAGDLLRM 131 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193 YTR+AEKR + + E G+K + I + +K E GVHR+ RI Sbjct: 132 YTRYAEKRGWSVNVQSENTTELGGVKDVQIAIRAKGTPAPEDGVWASMKYEGGVHRVQRI 191 Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 +S R TS + + V+P +D EIEI D +ID + +SG GGQ VNTT SAVR+ Sbjct: 192 PVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRM 251 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309 TH+PTG+ V Q E+SQ +N+A A +L+++L L ++ +E A + +++ Sbjct: 252 THLPTGITVNMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLDRS 309 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RTN + + VLDGDL + + + Sbjct: 310 ERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 353 >gi|298292694|ref|YP_003694633.1| peptide chain release factor 1 [Starkeya novella DSM 506] gi|296929205|gb|ADH90014.1| peptide chain release factor 1 [Starkeya novella DSM 506] Length = 365 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 116/345 (33%), Positives = 169/345 (48%), Gaps = 18/345 (5%) Query: 16 WDNAVQRLSFLNTKTE-DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 D + R + + +P + L RE L +K ++ Sbjct: 9 LDQLLARHAEIEHALSANP----DAETYVRLSREFAELSPLTDSVKALRSAERQLTDART 64 Query: 75 LALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LA E + ++ ++++ + L D LEV AG GG E Sbjct: 65 LAAEAAGDKEMAALAEEEVASLEEQVETLTHAVRLALLPKDAMDERGVILEVRAGTGGDE 124 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A L RMY R+A + E L + +G G K + G AY LK E GVHR Sbjct: 125 AALFAGDLFRMYERFAGLNGWSVEVLSLTEGTAGGFKEIVAALHGSGAYAKLKFESGVHR 184 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ + + R HTS +++ V P + ++I I+ESD RID +RASGAGGQHVN T+SA Sbjct: 185 VQRVPETEGSGRIHTSAATVAVLP-EVEDVDIAINESDLRIDVFRASGAGGQHVNKTESA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITH+PTG VV Q ERSQHKNKA+A MLRA++YE E +KR+ + K ++G G Sbjct: 244 VRITHLPTGTVVAVQDERSQHKNKARAMGMLRARIYEAEREKRD--SARASERKVQVGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350 +IR+Y P V D R + ++L G+ L + + A Sbjct: 302 DRSERIRTYNF-PQGRVTDHRIGLTLHKLPEILSGEGLGELVDAL 345 >gi|22537235|ref|NP_688086.1| peptide chain release factor 1 [Streptococcus agalactiae 2603V/R] gi|32171547|sp|Q8DZM4|RF1_STRA5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|22534102|gb|AAM99958.1|AE014241_9 peptide chain release factor 1 [Streptococcus agalactiae 2603V/R] Length = 359 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 97/348 (27%), Positives = 164/348 (47%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L RE ++ +E + + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSREEASTRETVTAYREYKQVIQNISDAEEM 66 Query: 76 ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + L+E + + + E + L D + LE+ AGG E+ Sbjct: 67 IKDASGDAELEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E EI + D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYEIDQKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+ HIPTG+ V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ +G G Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G +D+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQ 350 >gi|163793919|ref|ZP_02187893.1| Protein chain release factor A [alpha proteobacterium BAL199] gi|159181030|gb|EDP65547.1| Protein chain release factor A [alpha proteobacterium BAL199] Length = 356 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 121/347 (34%), Positives = 180/347 (51%), Gaps = 14/347 (4%) Query: 16 WDNAVQRLSFLNTKTEDPH-LWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLI 71 D + R L + P + + L +E L + ++ + L D Sbjct: 7 LDRVLTRALELEARLASPDGFV--QSDFQRLSKELAELTPVVETVGLLRRTRAELADAQA 64 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L E + E +E + ++ L EAD+ +A LEV AG GG E+ Sbjct: 65 LAEESDGEMRELAEEEAAAIEAKLPDLERAMMLHLLPRDEADARNAILEVRAGTGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MY R+A+ R ++ E +E+ + E G K A I G + + LK E GVHR+ Sbjct: 125 LFAADLFAMYQRYAQGRGWRFEVMEVSENEIGGYKEAIATISGQSVFAHLKFESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P + +++ I + D RID YR+SGAGGQHVNTTDSAVR Sbjct: 185 RVPATESQGRIHTSAATVAVLP-EAEEVDVAIDDKDLRIDVYRSSGAGGQHVNTTDSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTGVVV Q E+SQHKN+A+A +LRA+L++ E +R+ K++IG G Sbjct: 244 ITHLPTGVVVTQQDEKSQHKNRAKAMKILRARLFDQERTRRDSER--AADRKSQIGSGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354 +IR+Y P V D R N+ V+ G+ LD+ + A +A Sbjct: 302 SERIRTYNF-PQGRVTDHRINLTLYKIDKVMSGEALDEIVDALIAED 347 >gi|15900891|ref|NP_345495.1| peptide chain release factor 1 [Streptococcus pneumoniae TIGR4] gi|111658249|ref|ZP_01408941.1| hypothetical protein SpneT_02000563 [Streptococcus pneumoniae TIGR4] gi|20139341|sp|Q97R20|RF1_STRPN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|14972493|gb|AAK75135.1| peptide chain release factor 1 [Streptococcus pneumoniae TIGR4] Length = 359 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 98/348 (28%), Positives = 160/348 (45%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + + +E + L + + E+ Sbjct: 7 LQVVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNIVDAEEM 66 Query: 76 ALEEDDCSI-----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKESGGDADLEELAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E G K ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350 >gi|302542528|ref|ZP_07294870.1| peptide chain release factor 1 [Streptomyces hygroscopicus ATCC 53653] gi|302460146|gb|EFL23239.1| peptide chain release factor 1 [Streptomyces himastatinicus ATCC 53653] Length = 356 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 116/347 (33%), Positives = 177/347 (51%), Gaps = 13/347 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ ++ + + L + DP + + EAK L + L I ++ + D Sbjct: 1 MFEAVEDLIGEHAALEKRLADPAVHADQREAKRLNKRYAELTPIIDTYRDWKQTGDDIET 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EL +DD E + R + + + +D D LEV AG GG ES Sbjct: 61 AQEL--AQDDPDFADEVKELELRRAELTDRLRLLLVPRDPSDDKDVILEVKAGEGGEESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGE 184 +A LLRMY R+AE+ +KTE ++ ++ + G K + + G + LK E Sbjct: 119 LFAGDLLRMYLRYAERIGWKTEIIDANESDLGGYKDVQVAVKAKGTIEPGQGVWARLKYE 178 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ +S R HTS + + V P + +E+EI +D RID YR+SG GGQ VN Sbjct: 179 GGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEVEVEIGPNDLRIDVYRSSGPGGQSVN 237 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVRITH+PTG+VV CQ E+SQ +NK QA +LR++L ++ E A+ S+ Sbjct: 238 TTDSAVRITHLPTGIVVSCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREASDARRSQV 297 Query: 305 E-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 + +IR+Y P + D R + + VLDG+L ++A Sbjct: 298 RTVDRSERIRTYNF-PENRISDHRVGFKAYNLDQVLDGELAPVIQAC 343 >gi|227535953|ref|ZP_03966002.1| peptide chain release factor RF2 [Sphingobacterium spiritivorum ATCC 33300] gi|300771659|ref|ZP_07081534.1| peptide chain release factor RF2 [Sphingobacterium spiritivorum ATCC 33861] gi|227244196|gb|EEI94211.1| peptide chain release factor RF2 [Sphingobacterium spiritivorum ATCC 33300] gi|300761648|gb|EFK58469.1| peptide chain release factor RF2 [Sphingobacterium spiritivorum ATCC 33861] Length = 283 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 136/264 (51%), Positives = 194/264 (73%) Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 Q ++E +F+++LS E D DA L++ AGAGGTES DWA ML+RMY W EK Sbjct: 16 ESQYQTALQDIEELEFKNMLSAEEDQLDAILQITAGAGGTESCDWAAMLMRMYIMWGEKH 75 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 K + +G+ AGIK+ TL G AYG+LKGE GVHRLVRISP+DSN++RHTSF+S Sbjct: 76 GCKVTEQDSQEGDVAGIKTVTLQFSGNFAYGYLKGENGVHRLVRISPFDSNAKRHTSFAS 135 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 ++VYP++DD+IEI++ +S+ DT+R+ GAGGQ+VN ++AVR+ H PTG++++ Q+ RS Sbjct: 136 VYVYPLIDDNIEIDVKDSEIEWDTFRSGGAGGQNVNKVETAVRLHHKPTGIIIKNQETRS 195 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q +NK A +L+++LYE+E++KR+E + E SK +I WG QIR+YVL PY++VKDLRT Sbjct: 196 QLQNKENALRLLKSQLYEIEMRKRQEATAVIEGSKKKIEWGSQIRNYVLHPYKLVKDLRT 255 Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352 ++E ++ VLDGD+D F+KA L Sbjct: 256 SVETSNTQAVLDGDIDMFLKAYLM 279 >gi|21672454|ref|NP_660521.1| peptide chain release factor 1 [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|25009047|sp|Q8K9X0|RF1_BUCAP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|21623068|gb|AAM67732.1| peptide chain release factor 1 [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 361 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 113/342 (33%), Positives = 170/342 (49%), Gaps = 8/342 (2%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +F+ + R + N + K L +E + + + + D Sbjct: 4 SIFNKLKSLRNRYEEIEIMLSQKDTISNQEKFKNLSKEYLQISEIVKNFIKWEKLETDIK 63 Query: 71 ILLELALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 + L + + I QE ++ K E + L D + ++E+ A GG E Sbjct: 64 NINLLFNDVEMHDIAQEELFIVKKQKKKLEEKIKILLLPVDPNDQHSCFIEIRAATGGDE 123 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 S +A L RMYTR+AE +KTE + + E G K + G A G LK E G HR Sbjct: 124 SSIFAGELFRMYTRYAENYMWKTEIMSSSENERGGFKEIIAKVTGKGACGRLKFESGGHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS ++ + PV + + EI SD +IDT+R+SGAGGQHVNTTDSA Sbjct: 184 VQRVPETESQGRIHTSTCTVAIMPVRPKTKKEEIKVSDLKIDTFRSSGAGGQHVNTTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 +RITHIP+G VV+CQ ERSQHKNKA+A ++L A++Y +L K ++ + +G G Sbjct: 244 IRITHIPSGNVVECQDERSQHKNKAKALSILSARVYADKLAKSQKEN--SSMRRILLGTG 301 Query: 310 R---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + R+Y + D R N+ ++VL G LD + Sbjct: 302 ERSDRNRTYNFA-QNRITDHRINLTIYKLNEVLQGKLDLLID 342 >gi|116671165|ref|YP_832098.1| peptide chain release factor 1 [Arthrobacter sp. FB24] gi|166223528|sp|A0JY78|RF1_ARTS2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|116611274|gb|ABK03998.1| bacterial peptide chain release factor 1 (bRF-1) [Arthrobacter sp. FB24] Length = 357 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 103/352 (29%), Positives = 175/352 (49%), Gaps = 15/352 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + + + + DP ++ + A+ L R L+ + + D Sbjct: 1 MFESVQGLLDEHAAIQAQLGDPAVYADQKLARKLGRRSAQLNGIVEAYHRWESIRDDLAA 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E+ ++D E + ++ + + D+ + LEV G GG E+ Sbjct: 61 AKEM--ADEDPEFAAEVPELEASLETAAAKLRRLLIPRDPDDARNVILEVKGGEGGDEAA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI------KGPNAYGWLKGEQ 185 +A LLRMY+R+AE R +KTE + + + G K + + Y LK E Sbjct: 119 LFAADLLRMYSRYAESRGWKTELISATESDLGGYKDVQMAVKGNSNDPAEGVYARLKFEG 178 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ +S R HTS + + V P VD+ E+EI+++D +ID YR+SG GGQ VNT Sbjct: 179 GVHRVQRVPVTESQGRIHTSAAGVLVLPEVDEPEELEINQNDLKIDVYRSSGPGGQSVNT 238 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITH+PTG+VV Q E+SQ +N+ +LRA++ + ++ + K++ Sbjct: 239 TDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARILAHQQEQIDAEN--SAQRKSQ 296 Query: 306 I---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 I +IR+Y P + D RT + + V++GDL+ +++ + + Sbjct: 297 IRTMDRSERIRTYNY-PENRIADHRTGYKAYNLDQVMNGDLEPVIQSAIEMD 347 >gi|328944392|ref|ZP_08241854.1| peptide chain release factor RF1 [Atopobium vaginae DSM 15829] gi|327490976|gb|EGF22753.1| peptide chain release factor RF1 [Atopobium vaginae DSM 15829] Length = 354 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 111/334 (33%), Positives = 163/334 (48%), Gaps = 13/334 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + + L K DP + + E + +E + ++ +E L D E+ Sbjct: 5 LEKLIAAYAELEKKMIDPAIVADPKEYARIAKEHARQGDLVARAREYLQALDDIEAAKEM 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEV---EYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D D + + + + D D +E+ AG GG E+ Sbjct: 65 LHDADADEREMLQEDIAANEEKLPALEDEIKIMLIPGDPNDEKDTIVEIRAGVGGDEAAI 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L +MY R+AE + +K E L E G K+ + G Y +K E GVHR+ R Sbjct: 125 FAGDLYKMYERFAESKNWKVEILSSSPSEVGGFKTIEFKMLGEKVYSVMKYESGVHRVQR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R TS +++ V P D I+I+I +D RIDTY ASG GGQ VNTT SAVRI Sbjct: 185 VPKTESQGRIQTSTATVAVLP-EADEIDIQIDPTDLRIDTYCASGPGGQCVNTTYSAVRI 243 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WG 309 TH+PT VVQ Q +RSQ +N+ MLRA+LYE+EL+K++E G + ++IG Sbjct: 244 THLPTNTVVQSQDQRSQIQNREVCMQMLRARLYEMELEKQQEEQ--GAARLSQIGHGNRS 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIE-KTSPSDVLDGD 342 +IR+Y QP V D R + VL GD Sbjct: 302 EKIRTYN-QPQDRVTDHRIGFNATYN--GVLLGD 332 >gi|294786650|ref|ZP_06751904.1| peptide chain release factor 1 [Parascardovia denticolens F0305] gi|315226253|ref|ZP_07868041.1| peptide chain release factor RF1 [Parascardovia denticolens DSM 10105] gi|294485483|gb|EFG33117.1| peptide chain release factor 1 [Parascardovia denticolens F0305] gi|315120385|gb|EFT83517.1| peptide chain release factor RF1 [Parascardovia denticolens DSM 10105] Length = 366 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 105/345 (30%), Positives = 165/345 (47%), Gaps = 16/345 (4%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + + P + + + + L R L +S + + D E A E++ Sbjct: 15 DEYHEIERQMSQPEVASDPDKIRKLGRRHAELGQIVSAYESYRQIRDDLEAAQEFASEDE 74 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 + + + E + + D+ D +E+ AGAGG E+ +A LLRM Sbjct: 75 SFAQEAQRLEADLP--EAAEKLRTALIPRDPDDARDTIMEIKAGAGGEEAALFAGDLLRM 132 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193 YTR+AEKR + TE + + E G+K + + LK E GVHR+ RI Sbjct: 133 YTRYAEKRSWSTEIMSQNMTELGGVKDIQIAFRSKGVVAPADGVWASLKYEGGVHRVQRI 192 Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 +S R TS + + V+P DD EIE+ D +ID + +SG GGQ VNTT SAVR+ Sbjct: 193 PVTESQGRIQTSAAGVIVFPEADDDDDEIEVDPKDLKIDIFMSSGPGGQSVNTTYSAVRM 252 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309 THIPTG+VV Q E+SQ +N+ A +L+++L L ++ EE + +++ Sbjct: 253 THIPTGIVVSMQDEKSQIQNRQAALRVLKSRL--LAMKHEEEAQEAADMRHSQVRSLDRS 310 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RTN + + VLDGDL + + + Sbjct: 311 ERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIKAD 354 >gi|206890892|ref|YP_002247867.1| peptide chain release factor 2 [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742830|gb|ACI21887.1| peptide chain release factor 2 [Thermodesulfovibrio yellowstonii DSM 11347] Length = 287 Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats. Identities = 140/264 (53%), Positives = 196/264 (74%) Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + ++ IK ++E+ + + LL GE D N+A + +H GAGGTESQDWA +L+RMY RWAEK+ Sbjct: 18 EEEVENIKSQIEHLEIKLLLKGEHDKNNAIVSIHPGAGGTESQDWAEILMRMYLRWAEKK 77 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK E +++ GEEAGIK T ++G AYG+LK E GVHRLVR+SP+D+N RRHTSF++ Sbjct: 78 GFKVEIVDLQLGEEAGIKDVTFTVEGQYAYGYLKCESGVHRLVRVSPFDANKRRHTSFAA 137 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P ++D+I++EI + D R+DT+RASGAGGQHVN SAVRI HIPTG++V CQ ERS Sbjct: 138 VSVLPEIEDNIQVEIKDEDIRVDTFRASGAGGQHVNKVSSAVRIVHIPTGIIVTCQTERS 197 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QH+N+ A +LR+K+Y L +++E+ +K EI WG QIRSY+L PY+++KD RT Sbjct: 198 QHRNREIAMKILRSKIYALLQKEQEDKIKSITGNKKEIAWGSQIRSYILHPYRLIKDHRT 257 Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352 +IE + DVLDG++D F++ L Sbjct: 258 DIEVYNVEDVLDGNIDIFIETYLK 281 >gi|88855314|ref|ZP_01129978.1| peptide chain release factor 1 [marine actinobacterium PHSC20C1] gi|88815221|gb|EAR25079.1| peptide chain release factor 1 [marine actinobacterium PHSC20C1] Length = 359 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 110/352 (31%), Positives = 173/352 (49%), Gaps = 15/352 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + + L + DP L + + +K + R L ++ + D Sbjct: 1 MFESVQSLLTEHGELEGQLADPELHSDPVRSKKVNRRYAELSRIVAAYNNWRQLTDDLAA 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E+A E++ + E + + DS D +E+ G GG ES Sbjct: 61 ATEMADEDESFAAEIPGLTETLDTAQEKLRRIL--IPRDPNDSRDVIMEIKMGEGGAESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI------KGPNAYGWLKGEQ 185 +A LLRMY +AE +K+KTE +E + GIK L + + LK E Sbjct: 119 LFAGDLLRMYLHYAESKKWKTEIIEQTSSDLGGIKDVQLAVKGNSSDPAEGVWAHLKYEG 178 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ +S R HTS + + V+P VD+ E+EIS++D +ID YR+SG GGQ VNT Sbjct: 179 GVHRVQRVPATESQGRIHTSAAGVLVFPEVDEPEEVEISQNDLKIDVYRSSGPGGQSVNT 238 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITH+PTG+VV Q E+SQ +N+ +LRA++ L + E A E K++ Sbjct: 239 TDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARI--LARYQEEADAEASEYRKSQ 296 Query: 306 I---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 I +IR+Y P + D RT + + ++G L+ +++ + Sbjct: 297 IRTMDRSERIRTYNF-PENRIADHRTGYKAYNLDQAINGALEPVIQSCIMAD 347 >gi|288922982|ref|ZP_06417139.1| peptide chain release factor 1 [Frankia sp. EUN1f] gi|288345658|gb|EFC80030.1| peptide chain release factor 1 [Frankia sp. EUN1f] Length = 356 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 113/348 (32%), Positives = 171/348 (49%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + + + + DP + + A+ L R L + ++ D EL Sbjct: 5 LASMIAEHADIEKRLADPAIHNDPSVARELSRRYAELATPVDLALRLESVEGDLEAAREL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A ++ ++ + + + DS DA LEV AGAGG ES +A Sbjct: 65 AEQDASFRDEITALEDSRAELASRLRAYL--VPTDPDDSRDAILEVKAGAGGEESALFAG 122 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-------AYGWLKGEQGVH 188 LLRMY R+AE+R ++TE L+ + + G + ++ +K +G L+ E GVH Sbjct: 123 DLLRMYLRYAERRGWRTEILDANPSDLGGYRDVSVAVKARGSAGPGQGVFGRLRFEGGVH 182 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS + + V P D +D RID +R+SG GGQ VNTTDS Sbjct: 183 RVQRVPVTESAGRIHTSAAGVLVLPEAADVDVDV-DPNDLRIDVFRSSGPGGQSVNTTDS 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307 AVRITH+PTGVVV CQ E+SQ +NK A +LR++L +K E A +S+ + Sbjct: 242 AVRITHLPTGVVVSCQNEKSQLQNKESAMRILRSRLLAAAREKAESEAAAARASQVRTVD 301 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N + + VLDGDLD + A + + Sbjct: 302 RSEKIRTYNF-PENRISDHRINYKAHNLEQVLDGDLDAVVDALIEADQ 348 >gi|254424165|ref|ZP_05037883.1| peptide chain release factor 1 [Synechococcus sp. PCC 7335] gi|196191654|gb|EDX86618.1| peptide chain release factor 1 [Synechococcus sp. PCC 7335] Length = 367 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 105/348 (30%), Positives = 179/348 (51%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ + L + DP + ++ E + + + R L+ + + Q+ + E+ Sbjct: 10 LESVEETFGELTRRMADPDVAKDPDEFQKIAKMRASLEETVQTYHQWQETDGELAGAREV 69 Query: 76 ALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E S ++E + E + + L D + LE+ AG GG E+ Sbjct: 70 YKEAASDSEMKEMAAMEVTELEESLAALEKRLKILLLPRDPNDDKNIMLEIRAGTGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA LLR+Y+R+AE + +K L + G+K A + I+G Y LK E GVHR+ Sbjct: 130 GIWAGDLLRLYSRYAEGQGWKANLLSESRADMGGVKEAIVEIQGNQVYSKLKFESGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P D +EI I + + T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPLTESGGRVHTSTATVAVMP-EVDDVEIHIDPKEIVMTTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ V C +ERSQ +N+ +A +LRAKLYE++LQ++++ I K+++G G Sbjct: 249 DLIHKPTGIRVFCTEERSQLQNRERAMQILRAKLYEMKLQEQKDE--ISSMRKSQVGSGS 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D R N + S VL+GD++ ++ ++ + Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLN-QNFSLPAVLEGDIETVVQTCISQDQ 352 >gi|228469749|ref|ZP_04054715.1| peptide chain release factor 2, programmed [Porphyromonas uenonis 60-3] gi|228308684|gb|EEK17417.1| peptide chain release factor 2, programmed [Porphyromonas uenonis 60-3] Length = 328 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 129/321 (40%), Positives = 197/321 (61%), Gaps = 11/321 (3%) Query: 41 EAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE 100 A+ MR + + I + + + + + ++ Q+ D R VE Sbjct: 3 RAQQQMRRVGEIRSWIEAFEAVDAATQEVALAYDFYK--EEAVEEQDVDDAYARAIKLVE 60 Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 + ++LS E D A L+V+AGAGGTESQDWA+ML+RMY RWAE+ +K DG Sbjct: 61 DLELRNMLSAEEDRLGAVLKVNAGAGGTESQDWASMLVRMYQRWAERSGYKVTITNWQDG 120 Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220 ++AG+K+ T+ I+G AYG+LK E GVHRLVR+SPY++ +R TSF+S++V P+VDDSIE Sbjct: 121 DDAGVKTVTMQIEGELAYGFLKSENGVHRLVRVSPYNAQGKRMTSFASVFVVPLVDDSIE 180 Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG--------VVVQCQQERSQHKN 272 +E++ + DT+R+SGAGGQ+VN ++ VR+ + T +V++ + RSQ +N Sbjct: 181 VEVNPALLSWDTFRSSGAGGQNVNKVETGVRLHYQYTDPDTGVPEEIVIENTETRSQLEN 240 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 + A +LR++LY+ EL++R N E++K +I WG QIRSYV + VKD RT + Sbjct: 241 RENALRLLRSQLYDKELERRRAAQNEVEANKKKIEWGSQIRSYVFDD-RRVKDHRTGYQT 299 Query: 333 TSPSDVLDGDLDDFMKATLAI 353 + + V+DGD+D F+KA L Sbjct: 300 SDVNGVMDGDIDAFIKAYLMQ 320 >gi|25011160|ref|NP_735555.1| peptide chain release factor 1 [Streptococcus agalactiae NEM316] gi|76798425|ref|ZP_00780665.1| peptide chain release factor 1 [Streptococcus agalactiae 18RS21] gi|77408667|ref|ZP_00785400.1| peptide chain release factor 1 [Streptococcus agalactiae COH1] gi|77410552|ref|ZP_00786913.1| peptide chain release factor 1 [Streptococcus agalactiae CJB111] gi|77413289|ref|ZP_00789485.1| peptide chain release factor 1 [Streptococcus agalactiae 515] gi|32171550|sp|Q8E5C3|RF1_STRA3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|23095559|emb|CAD46768.1| peptide chain release factor 1 [Streptococcus agalactiae NEM316] gi|76586220|gb|EAO62738.1| peptide chain release factor 1 [Streptococcus agalactiae 18RS21] gi|77160676|gb|EAO71791.1| peptide chain release factor 1 [Streptococcus agalactiae 515] gi|77163500|gb|EAO74450.1| peptide chain release factor 1 [Streptococcus agalactiae CJB111] gi|77172715|gb|EAO75851.1| peptide chain release factor 1 [Streptococcus agalactiae COH1] gi|319745079|gb|EFV97405.1| peptide chain release factor RF1 [Streptococcus agalactiae ATCC 13813] Length = 359 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 97/348 (27%), Positives = 165/348 (47%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L RE + ++ +E + + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQNISDAEEM 66 Query: 76 ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + L+E + + + E + L D + LE+ AGG E+ Sbjct: 67 IKDASGDAELEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E EI + D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYEIDQKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+ HIPTG+ V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ +G G Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G +D+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQ 350 >gi|281420644|ref|ZP_06251643.1| peptide chain release factor 1 [Prevotella copri DSM 18205] gi|281405417|gb|EFB36097.1| peptide chain release factor 1 [Prevotella copri DSM 18205] Length = 369 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 89/354 (25%), Positives = 155/354 (43%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R ++T DP + + L +E + L + + K + L ++ Sbjct: 10 LEGLESRYEEVSTLITDPDVIADQPRYVKLTKEWKDLGDIMDARKRYINCLNSIKEAKDI 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + L + + E D+ + +E+ GAGG E+ Sbjct: 70 LANESDPEMKEMAREELNENEALQPKLEEEIKIALVPKDPEDAKNVQMEIRGGAGGDEAA 129 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MY ++ E + + + +G G K + G + YG LK E GVHR+ Sbjct: 130 LFAGDLFNMYKKYCESKGWTVSVTSVSEGAVGGYKEIDFAVSGTDVYGTLKYESGVHRVQ 189 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P D I+E D + DT+R+SGAGGQ+VN +S VR Sbjct: 190 RVPATETQGRMHTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKVESGVR 248 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + + ++++C + R Q KNK +A + L +++ E QK + +I K Sbjct: 249 LRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTFIHDREHQKY--VDDIASRRK 306 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + + G + IR+Y P V D R + L GD+ D + A + Sbjct: 307 SLVSTGDRSAKIRTYNF-PQGRVTDHRIGYTTHDLNGFLAGDIQDMIDALTVAE 359 >gi|300867105|ref|ZP_07111771.1| Peptide chain release factor 1 [Oscillatoria sp. PCC 6506] gi|300334860|emb|CBN56937.1| Peptide chain release factor 1 [Oscillatoria sp. PCC 6506] Length = 365 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 101/348 (29%), Positives = 181/348 (52%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + Q + L + DP + ++ E + + + R L+ ++ + ++ + ++ Sbjct: 10 LKSVEQTFNELTRRMADPDVAKDPNEFQRVAKARSSLEEVVNTFELWKETQENLAGAKQI 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130 E +QE + + + L D + LE+ AG GG E+ Sbjct: 70 LKESASDPEMQEMASLEVGELEDKSDYLESRLKVLLLPRDPNDDKNIMLEIRAGTGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L+RMY+R+A+ + ++ + L GE G K A L I+G + Y LK E GVHR+ Sbjct: 130 SIWAADLVRMYSRYAQSQNWQVKMLSESVGESRGFKEAILEIQGDSVYSKLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P D +EI I D + T R+ GAGGQ+VN ++A Sbjct: 190 QRVPVTEAGGRVHTSTATVAVMP-EVDDVEIHIDPKDIEMSTARSGGAGGQNVNKVETAA 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ + C +ERSQ +NK +A +LRAKLYE++L+++++ + ++++G G Sbjct: 249 DLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMKLREQQDE--VTSMRRSQVGTGS 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + D R E S + +L+GD+DD ++A +++ + Sbjct: 307 RSEKIRTYNYKD-NRATDHRLG-ENFSLNTILEGDIDDVIQACISLDQ 352 >gi|257056964|ref|YP_003134796.1| peptide chain release factor 1 [Saccharomonospora viridis DSM 43017] gi|256586836|gb|ACU97969.1| bacterial peptide chain release factor 1 (bRF-1) [Saccharomonospora viridis DSM 43017] Length = 358 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 110/354 (31%), Positives = 173/354 (48%), Gaps = 16/354 (4%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 L GL D + L + DP + + A+ L R L + + E++ Sbjct: 4 ESLRGLLD------EYAELEKQLADPAVHADQARARKLGRRYSELSPVVKTVGELETTRS 57 Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + ELA E+ + + + D +D +E+ +G GG Sbjct: 58 ELEAAKELAAEDSSFAEEVDRLGKRVSALETKLAELLL--PRDPYDGSDVVMEIKSGEGG 115 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLK 182 ES +A LLRMY R+AE++ + E L+ + G K T+ +K + LK Sbjct: 116 EESALFAGDLLRMYLRFAERQGWTAEILDATPSDLGGYKDVTVSVKSKGTEAEGVWACLK 175 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E GVHR+ R+ +S R HTS + + +Y + IE+EI +D RID +R+SG GGQ Sbjct: 176 FEGGVHRVQRVPATESQGRIHTSAAGVLIY-PEPEEIEVEIDPNDLRIDVFRSSGPGGQS 234 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVR+TH+PTG+VV CQ E+SQ +N+A+A +L+A+L L ++ A S Sbjct: 235 VNTTDSAVRVTHLPTGIVVSCQNEKSQIQNRARAIQVLQARLQALAEEEAAAKAADARRS 294 Query: 303 KTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + + ++R+Y P + D R N + + VLDG+L ++A A + Sbjct: 295 QVRTVDRSERVRTYNF-PENRISDHRVNYKAYNLDQVLDGELSGVLEALRAADR 347 >gi|222149911|ref|YP_002550868.1| peptide chain release factor 1 [Agrobacterium vitis S4] gi|254790856|sp|B9JT13|RF1_AGRVS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|221736893|gb|ACM37856.1| peptide chain release factor 1 [Agrobacterium vitis S4] Length = 359 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 113/344 (32%), Positives = 176/344 (51%), Gaps = 18/344 (5%) Query: 18 NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILL 73 +R + + P L E L + I+E+ + + D LL Sbjct: 11 ELERRFGEIEARMSAGPA----ADVYVKLASEYSELQPVVKAIRELGLAEKEVADLKALL 66 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA--DSNDAYLEVHAGAGGTESQ 131 + + L E +LE K+ + L + D A LE+ AG GG+E+ Sbjct: 67 ADKSTDREMRDLAEMELPDVEARLEGLEKEIQIQLLPKDAADEKSAILEIRAGTGGSEAA 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R+A + +K E L +G+ G K + G + LK E GVHR+ Sbjct: 127 LFAGDLFRMYERFAAGKGWKVEVLSSSEGDAGGFKEIIATVTGRGVFSKLKFESGVHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P + I+IE+ D RIDT R+SGAGGQHVNTTDSAVR Sbjct: 187 RVPDTETQGRIHTSAATVAVLP-EAEEIDIEVRAEDIRIDTMRSSGAGGQHVNTTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV E+SQH+N+A+A +LR++L+++E Q+ + K+++G G Sbjct: 246 ITHLPTGLVVTSS-EKSQHQNRAKAMQVLRSRLFDMERQR--ADSERSADRKSQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ ++ G++D+ + A +A Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLYKLDRMMMGEIDEVVDALIA 345 >gi|157825817|ref|YP_001493537.1| peptide chain release factor 1 [Rickettsia akari str. Hartford] gi|166223595|sp|A8GNQ4|RF1_RICAH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|157799775|gb|ABV75029.1| peptide chain release factor 1 [Rickettsia akari str. Hartford] Length = 355 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 124/349 (35%), Positives = 184/349 (52%), Gaps = 16/349 (4%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + + + L K + + E +E L++ + IKE + Sbjct: 6 NLAKILDKYDNLGKKLSS-GIMGD--EFVKASKEYAELEDVVVKIKEYNKAKSELEEANN 62 Query: 75 LALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LE + ++ I + L +ADS A +EV AG+GG E Sbjct: 63 FKLELGFDNATLAMIEDEIHILENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGGEE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A +L MY R+AE + ++ E L I D G K A+ IKG + + LK E GVHR Sbjct: 123 AALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS +++ V P + ++I+I + D RIDTYRASGAGGQHVNTTDSA Sbjct: 183 VQRVPETESQGRIHTSAATVAVLP-EAEEVDIKIEDKDLRIDTYRASGAGGQHVNTTDSA 241 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG+ V Q E+SQHKNKA+A +LRA++Y E ++R + +S + +IG G Sbjct: 242 VRITHIPTGITVALQDEKSQHKNKAKALKILRARIY--EEERRNKEQERADSRRGQIGSG 299 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIK 354 +IR+Y P V D R N+ +V+ +G LD+F++A +A Sbjct: 300 DRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFIEALIAED 347 >gi|282879521|ref|ZP_06288252.1| peptide chain release factor 1 [Prevotella timonensis CRIS 5C-B1] gi|281306469|gb|EFA98498.1| peptide chain release factor 1 [Prevotella timonensis CRIS 5C-B1] Length = 370 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 91/354 (25%), Positives = 154/354 (43%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R ++T DP + + L +E + L + + K L ++ Sbjct: 11 LEGLEARFEEVSTLITDPDVIADQPRYVKLTKEYKDLGDIMDIRKRYIACLNAIRESKDI 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + LQ + + E D+ + +E+ AG GG E+ Sbjct: 71 LANETDADMKEMAREELQANEDMQPQLEEEIKLALVPKDPEDAKNVQMEIRAGTGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MY + + + + +++G G K + G N YG LK E GVHR+ Sbjct: 131 LFAGDLFNMYKHYCDSKGWTLSVTSVNEGSVGGYKEIDFAVSGDNVYGTLKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P D I+E D + DT+R+SGAGGQ+VN +S VR Sbjct: 191 RVPATETQGRMHTSAATVAVLPEADQFEVN-INEGDIKWDTFRSSGAGGQNVNKVESGVR 249 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + + ++++C + R Q KNK +A + LR +Y+ E QK I +I K Sbjct: 250 LRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLRTFIYDREHQKY--IDDIANRRK 307 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + + G + IR+Y P V D R + GD+ + A + Sbjct: 308 SLVSTGDRSAKIRTYNY-PQGRVTDHRIGYTTHDLQGFIGGDIQGVIDALTVAE 360 >gi|297559304|ref|YP_003678278.1| peptide chain release factor 1 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843752|gb|ADH65772.1| peptide chain release factor 1 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 356 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 112/349 (32%), Positives = 170/349 (48%), Gaps = 12/349 (3%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+ + L + DP + + A+ L + L I + +++ D Sbjct: 1 MKLDDLLGEYYELEQQLADPEVHADQARARTLGKRYAQLTPIIETYRALKEVESDIDTAR 60 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 ELA E+ + + + E + + AD + +EV AG GG ES + Sbjct: 61 ELAAEDSSFAEEADRLTEEA--ERLTERLRVLLIPRDPADDKNLIMEVKAGEGGEESALF 118 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-------YGWLKGEQG 186 A L+RMY R+AE++ +KTE ++ + G K T+ K + LK E G Sbjct: 119 AGDLVRMYLRYAERQGWKTEVIDSTHSDLGGYKDITIAFKNKGTPEPGSGVWPMLKFEGG 178 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S R HTS + + V P + IE+EI E D R+D YR+SG GGQ VNTT Sbjct: 179 VHRVQRVPVTESQGRIHTSAAGVLVVP-EAEDIEVEIHEKDLRVDVYRSSGPGGQSVNTT 237 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE- 305 DSAVRITH+PTG+V CQ E+SQ +NK QA +LRA++Y + A S+ Sbjct: 238 DSAVRITHLPTGIVASCQNEKSQLQNKEQAMRILRARIYAEAQASADAEAAAERKSQVRT 297 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + ++R+Y P + D R + + VLDG+L +KA + Sbjct: 298 VDRSERVRTYNF-PENRISDHRVGYKAYNLDQVLDGELGGVVKALVDAD 345 >gi|291297042|ref|YP_003508440.1| peptide chain release factor 1 [Meiothermus ruber DSM 1279] gi|290472001|gb|ADD29420.1| peptide chain release factor 1 [Meiothermus ruber DSM 1279] Length = 358 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 101/348 (29%), Positives = 168/348 (48%), Gaps = 9/348 (2%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + + ++ L + DP + N E + + + + + + I+ ++ L Sbjct: 1 MLEKLESLEAEYQALERQLADPAVLANQSEYQRISKRYAEMGHLVETIRSYKEALTHLAE 60 Query: 72 LLELALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 EL + + + + RI+ + L D +A +E+ AG GG E+ Sbjct: 61 ARELQFDPELGEMARADIAALEPRIRELEAELELLLLPKDPLDEKNAIVEIRAGTGGEEA 120 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L M +A++ ++ E L+ + G+ + GP AYG+LK E GVHR+ Sbjct: 121 ALFAAELRDMIMEYAKQGGYRVEVLDTSLTDLGGVSKVVFEVSGPGAYGYLKYEAGVHRV 180 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + ++++I +D I RASG GGQ VNTTDSAV Sbjct: 181 QRVPATETQGRIHTSTATVAVMP-EAEEVDVQIDPADLEITVSRASGPGGQGVNTTDSAV 239 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG--- 307 ++ H PTG++V C + RSQ KNK +A ++LR++L LE+++ EE A E +IG Sbjct: 240 QVLHKPTGMIVSCMESRSQIKNKEKALSILRSRL--LEMKRAEEAARRREDRLAQIGAGE 297 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R VL GDL +A + Sbjct: 298 RSEKIRTYNF-PQSRVTDHRIGFTTHDLEGVLAGDLSKLHEALRKADQ 344 >gi|94496666|ref|ZP_01303242.1| peptide chain release factor 1 [Sphingomonas sp. SKA58] gi|94424026|gb|EAT09051.1| peptide chain release factor 1 [Sphingomonas sp. SKA58] Length = 361 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 113/348 (32%), Positives = 175/348 (50%), Gaps = 15/348 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R + L + L +E ++ + +E++ + L + Sbjct: 8 IAQIEARRDEVQASMTRADLA--PDQFVRLSKEYAEIEPVAAAARELRRLRQELAALEMM 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E+ +++ + ++ + L AD+ A LE+ AG GG E+ Sbjct: 66 TGGEEADPAMRDMAQEEMQLLKSQLPAAERALALQLLPRDAADARPAMLEIRAGTGGDEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A+ + +K E L + E+ G K I G + LK E GVHR+ Sbjct: 126 ALFAGDLFRMYQRYADTQGWKMEMLSANASEQGGFKEVVASINGAGVFAKLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + ++++I+++D +ID YRASGAGGQHVNTTDSAV Sbjct: 186 QRVPVTESGGRIHTSAATVAVLP-EPEEVDVQIADADLKIDIYRASGAGGQHVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+VV Q ERSQHKNKA+A +LRA+LYE E ++ + K +G G Sbjct: 245 RITHVPTGIVVTQQDERSQHKNKAKAMQVLRARLYEAERERTQNEQAGA--RKAMVGSGD 302 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIK 354 +IR+Y P V D R N+ ++L+G L + + A A Sbjct: 303 RSERIRTYNF-PQGRVTDHRINLTLHRLPEILEGPGLSEVIDALTAED 349 >gi|313889382|ref|ZP_07823030.1| peptide chain release factor 1 [Streptococcus pseudoporcinus SPIN 20026] gi|313122214|gb|EFR45305.1| peptide chain release factor 1 [Streptococcus pseudoporcinus SPIN 20026] Length = 359 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 97/348 (27%), Positives = 164/348 (47%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R L DP + + L +E + ++ ++ ++ + E+ Sbjct: 7 LQSLEDRYEELGELLSDPEVVSDTKRFMQLSKEEASTRDTVTAYRQYKEIIQSIADAEEM 66 Query: 76 ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E S ++E + + + E + L D + LE+ AGG E+ Sbjct: 67 IKESGGDSEIEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLVMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E EI D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEDVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI HIPT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHIPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G +D+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEIVDALIMYDQ 350 >gi|299529204|ref|ZP_07042649.1| peptide chain release factor 2 [Comamonas testosteroni S44] gi|298722827|gb|EFI63739.1| peptide chain release factor 2 [Comamonas testosteroni S44] Length = 248 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 144/247 (58%), Positives = 186/247 (75%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + GEAD + ++++ AGAGGTE+ DWA+MLLR Y ++AE++ FK E G+ AGIK Sbjct: 1 MFGGEADPLNCFIDIQAGAGGTEACDWASMLLRQYLKYAERKGFKATVEEETPGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ ++G AYG L+ E GVHRLVR SP+DS+ RHTSFSS++VYP +DDSIEI I+ S Sbjct: 61 SATIKVEGEYAYGLLRTETGVHRLVRKSPFDSSGGRHTSFSSLFVYPEIDDSIEININPS 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D R DTYRASGAGGQH+N TDSAVR+THIPTG+VVQCQ RSQH N+ AW LR++LY+ Sbjct: 121 DVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYD 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 E++KR E E +KT++GWG QIRSYVL +KDLRTN+E ++ VLDGDLD F Sbjct: 181 FEMRKRMEEQQKLEDTKTDVGWGHQIRSYVLD-NSRIKDLRTNVEVSATQKVLDGDLDVF 239 Query: 347 MKATLAI 353 ++A+L Sbjct: 240 IEASLKQ 246 >gi|88807914|ref|ZP_01123425.1| peptide chain release factor 1 [Synechococcus sp. WH 7805] gi|88787953|gb|EAR19109.1| peptide chain release factor 1 [Synechococcus sp. WH 7805] Length = 365 Score = 206 bits (525), Expect = 3e-51, Method: Composition-based stats. Identities = 101/348 (29%), Positives = 165/348 (47%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + A L + DP + + + + RER L+ ++ +Q + EL Sbjct: 10 LEAARDSFHNLERQLADPDVASDPTRLQSIARERSRLEPLVNDYTSLQSVQAEREQAREL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130 + + + + + L D LE+ AGAGG E+ Sbjct: 70 LRDSRGDEEMANLAQLELEELDKRHEVLIQRLTLALLPKDPRDERSVMLEIRAGAGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY R++ +R + + + + + G K L +KG + + LK E GVHR+ Sbjct: 130 CLWAGDLARMYERFSSRRGWTVQPVSASEADLGGFKELILSVKGDSVFSELKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P D +E++I +D I T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADPVEVQIEPADLEISTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H P+G+ V C QERSQ +N+ +A +LRAKLY E Q E A + + ++G G Sbjct: 249 DLMHRPSGIRVFCTQERSQLQNRERAMEILRAKLY--ERQLAEANARESSARRAQVGTGD 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D R + VL G ++D + A +A ++ Sbjct: 307 RSEKIRTYNAKD-NRVTDHRLGRNFS-LDPVLQGQMEDVIGACIAEEQ 352 >gi|91205113|ref|YP_537468.1| peptide chain release factor 1 [Rickettsia bellii RML369-C] gi|119361596|sp|Q1RJT5|RF1_RICBR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|91068657|gb|ABE04379.1| Peptide chain release factor RF-1 [Rickettsia bellii RML369-C] Length = 357 Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats. Identities = 122/346 (35%), Positives = 181/346 (52%), Gaps = 15/346 (4%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + + + L+ K + E +E L++ + IKE + Sbjct: 9 NLTKILGKYEDLSEKLSS-GIGG--EEFVKASKEYADLEDIVQKIKEYNKAKAELEEANN 65 Query: 75 LALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E E + R + + L EADS A +E+ AG GG E Sbjct: 66 FKQEPSLDKATLEMIEEEIRNLEDSLPTLERSVKIALLPKDEADSKSAIIEIRAGTGGEE 125 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A L MY R+AE + ++ E L I + G K + IKG + + LK E GVHR Sbjct: 126 AALFAAKLFNMYQRYAELKGWRFEILSIDETGIGGYKEVSASIKGKDVFSKLKFESGVHR 185 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS +++ V P + ++I++ E D RIDTYRASGAGGQHVNTTDSA Sbjct: 186 VQRVPETESQGRIHTSAATVAVLP-EVEDVDIKLEEKDLRIDTYRASGAGGQHVNTTDSA 244 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG+ V Q E+SQHKNKA+A +LRA++YE E +K+++ + + +IG G Sbjct: 245 VRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKDQER--ANNRRKQIGSG 302 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ +V++G LD+F++A +A Sbjct: 303 DRSERIRTYNF-PQGRVSDHRINLTLYKIDEVINGQLDEFIEALIA 347 >gi|325002820|ref|ZP_08123932.1| peptide chain release factor 1 [Pseudonocardia sp. P1] Length = 358 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 118/345 (34%), Positives = 178/345 (51%), Gaps = 8/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ + + L + DP + + ++A+ L + L + +++ D EL Sbjct: 6 VDSLLDEYAELEQRLADPEVLADQVQARKLGKRYAQLGPVVRCARDLAQAREDRDAAREL 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D S E R+ + DS+D +EV +G GG ES +A Sbjct: 66 --ASEDRSFAAEADALDVRVVELETELAELLVPRDPHDSDDVLMEVKSGEGGEESALFAG 123 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA----YGWLKGEQGVHRLV 191 L+RMYTR+AE R +K E L + G K TL ++ + + LK E GVHR+ Sbjct: 124 DLVRMYTRYAESRGWKVELLGSTPSDLGGFKDVTLSVRSKDPAQGAWAALKFEGGVHRVQ 183 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS + + V+P D++ ++EI E D R+D +RASG GGQ VNTTDSAVR Sbjct: 184 RVPVTESQGRIHTSAAGVLVFPDADETPDVEIDEKDIRVDVFRASGHGGQSVNTTDSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGR 310 ITH+P+G+VV CQ ERSQ +NKA+A ++LRA+L + E A+ S+ + Sbjct: 244 ITHLPSGIVVSCQNERSQLQNKARAMDVLRARLQAKAEAEAAEAASEQRRSQVRTVDRSE 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + + S VLDG+L D A A + Sbjct: 304 RIRTYNF-PENRISDHRVGFKAHNLSSVLDGNLTDVFAALTAADR 347 >gi|258648524|ref|ZP_05735993.1| peptide chain release factor 1 [Prevotella tannerae ATCC 51259] gi|260851292|gb|EEX71161.1| peptide chain release factor 1 [Prevotella tannerae ATCC 51259] Length = 371 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 96/354 (27%), Positives = 163/354 (46%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R ++T DP + + L +E + L++ + K + L + L Sbjct: 12 LDGLRSRFEEVSTLITDPSVIADQTRYVRLTKEYKELEDLMQARKRYAELLSNLQESKNL 71 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 L E D + + + + + E+ + + D +A LE+ AG GG E+ Sbjct: 72 LLTETDAELKELAREEVAACEAEIPTCEEQIKLMLVPKDPEDGKNAILEIRAGTGGDEAA 131 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY ++ E + +K E ++G G K + G + YG LK E GVHR+ Sbjct: 132 LFAGDLFRMYAKFCESKGWKFEVSSANEGAVGGFKEVVASVTGADVYGTLKYESGVHRVQ 191 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P + I E + R +T+R+SGAGGQ+VN +S VR Sbjct: 192 RVPATETQGRVHTSAATVAVLPEAEAFDVE-IHEGEIRWETFRSSGAGGQNVNKVESGVR 250 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + + ++++C + R Q KNK +A LR +Y+ E QK + +I K Sbjct: 251 LRYDWKNPNTGETEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--VDDIANRRK 308 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 T + G + IR+Y P + D R N + +DGD+ D + + + Sbjct: 309 TLVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLPAFVDGDIQDCIDQLMVAE 361 >gi|66361428|pdb|1ZBT|A Chain A, Crystal Structure Of Peptide Chain Release Factor 1 (Rf-1) (Smu.1085) From Streptococcus Mutans At 2.34 A Resolution Length = 371 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 95/348 (27%), Positives = 157/348 (45%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L RE + ++ +E + + + E Sbjct: 19 LQAVEDRYEELGELLSDPDVVSDTKRFXELSREEANSRETVAVYREYKQVVQNIADAQEX 78 Query: 76 ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + L+E + + + E +F L D + LE+ AGG E+ Sbjct: 79 IKDASGDPELEEXAKEELKNSKVAKEEYEEKLRFLLLPKDPNDDKNIILEIRGAAGGDEA 138 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL Y ++AE + +K E E G+K + G + Y LK E G HR+ Sbjct: 139 ALFAGDLLNXYQKYAENQGWKFEVXEASANGVGGLKEVVAXVSGQSVYSKLKYESGAHRV 198 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ + +E EI D R+D Y ASGAGGQ+VN +AV Sbjct: 199 QRVPVTESQGRVHTSTATVL-VXPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 257 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ +G G Sbjct: 258 RIIHLPTNIKVEXQEERTQQKNRDKAXKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 315 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 316 RSERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILYDQ 362 >gi|268678716|ref|YP_003303147.1| peptide chain release factor 1 [Sulfurospirillum deleyianum DSM 6946] gi|268616747|gb|ACZ11112.1| peptide chain release factor 1 [Sulfurospirillum deleyianum DSM 6946] Length = 355 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 114/340 (33%), Positives = 177/340 (52%), Gaps = 9/340 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 R + L DP++ ++ + L +E+ +L+ E L L +E+ Sbjct: 11 DRYNELTMLLSDPNVSNDIKKMTALSKEQSNLEPIKEKTLEYFSTLEQIEENRFLLEDEE 70 Query: 81 DCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139 + +E L+ K + + L D + +LE+ AG GG E+ +A L + Sbjct: 71 LGELAKEELKLLEPHKEILEDEIKLLLLPKDPNDERNIFLEIRAGTGGDEAAIFAADLFK 130 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 Y R+AE R +K E + + +G G K LIKG A+ LK E GVHR+ R+ +S Sbjct: 131 SYLRYAENRGWKVEVVSLSEGVLNGYKEVIALIKGQGAFSRLKYEGGVHRVQRVPLTESQ 190 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS ++ V P D +E++I E D +ID R+SG GGQ VNTTDSAVRITH+PTG+ Sbjct: 191 GRVHTSAVTVAVMP-EVDDVEVDIQEKDLKIDVMRSSGNGGQSVNTTDSAVRITHLPTGI 249 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYV 316 VV Q +SQHKNK A +L+AKLY++++Q+R A E+ K ++G G +IR+Y Sbjct: 250 VVVNQDGKSQHKNKDAAMKILKAKLYDMQMQERN--AKESEARKQQVGSGDRSARIRTYN 307 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLAIKK 355 P + D R + +++G L D+ + + + Sbjct: 308 Y-PQNRITDHRVGLTLYRLDAIMEGGLYDELIDPIITHYQ 346 >gi|311898376|dbj|BAJ30784.1| putative peptide chain release factor 1 [Kitasatospora setae KM-6054] Length = 358 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 113/347 (32%), Positives = 174/347 (50%), Gaps = 13/347 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + + + L + DP + + A+ L + L + D + Sbjct: 1 MFEAVEELLVEHADLEKRLADPSVHADQANARKLAKRYAELTPITRTYLAWRQAGEDIVA 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EL +D + E + R E + + D D LEV AG GG ES Sbjct: 61 AREL--ATEDPDFIAEAKASEARQDELTEELRLLLVPRDPNDDKDVILEVKAGEGGEESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-------AYGWLKGE 184 +A LLRMY R+AE+ +KTE ++ ++ + G K ++ +K + LK E Sbjct: 119 LFAGDLLRMYLRYAERVGWKTELIDANESDLGGYKDVSVAVKTRGSAEPGQGVWARLKYE 178 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ +S R HTS + + V P + +E+EI +D RID YR+SG GGQ VN Sbjct: 179 GGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEVEVEIHANDLRIDVYRSSGPGGQSVN 237 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVRITH+PTG+V CQ E+SQ +NK QA +LR++L ++ E A+ S+ Sbjct: 238 TTDSAVRITHLPTGIVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAEREASDARRSQV 297 Query: 305 E-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 + +IR+Y P + D RT + + VLDGDL+ +++ Sbjct: 298 RTVDRSERIRTYNF-PENRISDHRTGFKSYNLDQVLDGDLNAVIQSC 343 >gi|194364499|ref|YP_002027109.1| peptide chain release factor 1 [Stenotrophomonas maltophilia R551-3] gi|238693440|sp|B4SKS8|RF1_STRM5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|194347303|gb|ACF50426.1| peptide chain release factor 1 [Stenotrophomonas maltophilia R551-3] Length = 360 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 107/323 (33%), Positives = 169/323 (52%), Gaps = 8/323 (2%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN- 91 P + + + L RE L+ + + + D + + D + E Sbjct: 26 PDVVADNTRFRDLSREFAQLEPIATALADETRAKADLAAAEGMRADPDLRELADEEIAAA 85 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 R++ + + D + +LEV AG GG E+ +A L RMY R+AE++ +K Sbjct: 86 QARLQELEQELALLLVPRDPRDDGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWK 145 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E + GE G K + G A+ LK E G HR+ R+ +S R HTS +++ + Sbjct: 146 VEIESDNPGEHGGYKEVVARVVGRGAFSRLKFESGTHRVQRVPATESQGRIHTSAATVAI 205 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P D+ +I I+ +D R+DT+R+SGAGGQHVN T+SA+RITH+PTGVVV+CQ ERSQH Sbjct: 206 IPEADEVDDIVINPADLRVDTFRSSGAGGQHVNKTESAIRITHVPTGVVVECQTERSQHA 265 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRT 328 N+ +A L+A+L + E Q+++ A ES + ++G G +IR+Y P + D R Sbjct: 266 NRDKAMKRLKAQLLDAERQRQD--AAQAESRRLQVGSGDRSQRIRTYNF-PQGRITDHRV 322 Query: 329 -NIEKTSPSDVLDGDLDDFMKAT 350 + ++L GDLD ++ Sbjct: 323 EGLTLYDLPNILAGDLDPLLQRL 345 >gi|183984069|ref|YP_001852360.1| peptide chain release factor 1 PrfA [Mycobacterium marinum M] gi|238690952|sp|B2HQL3|RF1_MYCMM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|183177395|gb|ACC42505.1| peptide chain release factor 1 PrfA [Mycobacterium marinum M] Length = 357 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 109/332 (32%), Positives = 159/332 (47%), Gaps = 9/332 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + + L DP L EA+ R L ++ +++ D EL Sbjct: 8 IDVLLAEHADLERALADPELHSRPDEARKAGRRFARLAPIVATYRKLVAAREDLETAHEL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A ++ + + D++D LEV +G GG ES +A Sbjct: 68 AATDESFAAEAAELEARVAELDSQLTDML--APRDPHDADDIVLEVKSGEGGEESALFAA 125 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-----KGPNAYGWLKGEQGVHRL 190 L RMY R+AE+ + L + G K ATL I + +K E GVHR+ Sbjct: 126 DLARMYIRYAERHGWTVTVLGETTSDLGGYKDATLAIASKGDTADGVWSRMKFEGGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS + + VYP ++ E++I ESD RID YR+SG GGQ VNTTDSAV Sbjct: 186 QRVPVTESQGRVHTSAAGVLVYPEPEEVGEVQIDESDLRIDVYRSSGKGGQGVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG+VV CQ ERSQ +NK +A +L A+L + ++ A+ +S+ + Sbjct: 246 RITHLPTGIVVTCQNERSQLQNKIRAMQVLGARLQAIAEEQAMADASADRASQIRTVDRS 305 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 +IR+Y P + D R + + VLDG Sbjct: 306 ERIRTYNF-PENRITDHRIGYKSHNLDQVLDG 336 >gi|319407578|emb|CBI81228.1| peptide chain release factor 1 [Bartonella sp. 1-1C] Length = 359 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 119/348 (34%), Positives = 181/348 (52%), Gaps = 18/348 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +R + ++ + P N L E L I+ I+ + + L + Sbjct: 10 KQLEKRFKIIESQMAENP----NAETYVKLASEYAELQPIIAPIRTLNSLRKEIAELETI 65 Query: 76 ALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + ++ + Q+I+ + Q L AD +E+ AG GG+E+ Sbjct: 66 ISDIQTDTEMRNLAQEELSSLSQKIQELEKELQILLLPKDIADEKSVIIEIRAGTGGSEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A +K E + + DGE G K I G + LK E GVHR+ Sbjct: 126 ALFAGNLFRMYERYANTHNWKVEIISLSDGEVGGYKEIIATISGKGVFSKLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 RI ++ R HTS +++ V P + I+IEI D RIDT RASGAGGQHVNTTDSAV Sbjct: 186 QRIPETETGGRIHTSAATVAVLP-EAEEIDIEIRSEDIRIDTMRASGAGGQHVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG++V Q E+SQH+N+A+A +LRA+L+++E QK + S KT++G G Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQK--AESERSASRKTQVGSGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +++GDL++ + A ++ + Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRIMEGDLNELINALISDHQ 348 >gi|304394129|ref|ZP_07376052.1| peptide chain release factor 1 [Ahrensia sp. R2A130] gi|303293569|gb|EFL87946.1| peptide chain release factor 1 [Ahrensia sp. R2A130] Length = 358 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 123/350 (35%), Positives = 178/350 (50%), Gaps = 19/350 (5%) Query: 16 WDNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + V R + + + P + L +E LD + I E+Q + L Sbjct: 7 IEQLVSRHAEVARLMSENP----DQETYVKLAKEYAELDPVVIKIGEMQAAQSEFADLAG 62 Query: 75 LALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 + + D + ++E + + Q L EAD+ +A LE+ AG GG+E Sbjct: 63 MLADGDTDAEMKEMAQAEMEPLKAAIEEHEAELQILLLPRDEADAKNAILEIRAGTGGSE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A L RMY R AE +K + L GE G K I G + LK E GVHR Sbjct: 123 AALFAGDLFRMYQRHAETSGWKVDVLSESAGEVGGYKEIIASINGTGVFARLKFESGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS +++ V P + ++IEI D RIDT RASGAGGQHVNTTDSA Sbjct: 183 VQRVPETESGGRVHTSAATVAVLP-EAEDVDIEIRNEDIRIDTMRASGAGGQHVNTTDSA 241 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTGVVV E+SQH+N+A A LR +LY++E QK ++ +S K ++G G Sbjct: 242 VRITHIPTGVVVLST-EKSQHQNRANAMKELRTRLYDMERQKVDQER--ADSRKGQVGSG 298 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 +IR+Y P V D R N+ ++ G+ LD+ + A + + Sbjct: 299 DRSERIRTYNF-PQGRVSDHRINLTLYKLDKMIAGEGLDEMLDALITDHQ 347 >gi|283783535|ref|YP_003374289.1| peptide chain release factor 1 [Gardnerella vaginalis 409-05] gi|283441331|gb|ADB13797.1| peptide chain release factor 1 [Gardnerella vaginalis 409-05] Length = 365 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 104/345 (30%), Positives = 165/345 (47%), Gaps = 16/345 (4%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + + ++ P + N + L R L + ++ + D E+A ++ Sbjct: 17 EEYRDIESRMGSPEVASNPDAIRKLGRRHAELGSIVNAYLNYKQLCDDFEAANEMASDDP 76 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D + + + E + D+ D +E+ AG GG E+ +A LLRM Sbjct: 77 DFAEEAKRLEEQIPAAKEKLRTAL--IPRDPDDARDMIMEIKAGTGGEEAALFAGDLLRM 134 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193 Y R+AEKR + T + E G+K L I + +K E GVHR+ RI Sbjct: 135 YMRYAEKRGWTTVIQSENSTELGGVKDVQLAIRAKGTPAPEDGVWASMKYEGGVHRVQRI 194 Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 +S R TS + + V+P +D EIEI D +ID + +SG GGQ VNTT SAVR+ Sbjct: 195 PVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRM 254 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309 THIPTG+VV Q E+SQ +N+A A +L+++L L ++ +E A + +++ Sbjct: 255 THIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLDRS 312 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RTN + + VLDGDL + + + Sbjct: 313 ERIRTYNF-PENRIVDHRTNYKAYNLDQVLDGDLQPVIDSDIQAD 356 >gi|148238741|ref|YP_001224128.1| peptide chain release factor 1 [Synechococcus sp. WH 7803] gi|166223613|sp|A5GIR6|RF1_SYNPW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|147847280|emb|CAK22831.1| Peptide chain release factor 1 [Synechococcus sp. WH 7803] Length = 365 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 102/348 (29%), Positives = 164/348 (47%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + A L + DP + + + + RER L+ ++ +Q + EL Sbjct: 10 LEAARSSFHNLERQLADPDVASDPTRLQSIARERSRLEPLVNDYASLQAVQSEREQAREL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130 + + + E L D LE+ AGAGG E+ Sbjct: 70 LRDSRGDEEMAHLAQLELDELDIRHEALIERLTLALLPRDPRDERSVMLEIRAGAGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY R++ +R + + + + + G K L +KG + + LK E GVHR+ Sbjct: 130 CLWAGDLARMYERFSSRRGWTVQPVSASEADLGGFKELILSVKGESVFSELKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P D +E++I +D I T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADPVEVQIEPADLEISTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H P+G+ V C QERSQ +N+ +A +LRAKLY E Q E A + + ++G G Sbjct: 249 DLMHRPSGIRVFCTQERSQLQNRERAMEILRAKLY--ERQLAEANARESSARRAQVGTGD 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D R + VL G ++D + A +A ++ Sbjct: 307 RSEKIRTYNAKD-NRVTDHRLGRNFS-LDPVLQGQMEDVIGACIAEEQ 352 >gi|50914205|ref|YP_060177.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS10394] gi|61214586|sp|Q5XC69|RF1_STRP6 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|50903279|gb|AAT86994.1| Bacterial Peptide Chain Release Factor 1 [Streptococcus pyogenes MGAS10394] Length = 359 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 95/348 (27%), Positives = 162/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L RE + ++ +E + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQTISDAEEM 66 Query: 76 ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + L+E + + + E + L D + LE+ AGG E+ Sbjct: 67 IKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+ HIPTG+ V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ +G G Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G +++ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMNEVIDALVMYDQ 350 >gi|297243816|ref|ZP_06927746.1| protein chain release factor A [Gardnerella vaginalis AMD] gi|296888237|gb|EFH26979.1| protein chain release factor A [Gardnerella vaginalis AMD] Length = 365 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 104/345 (30%), Positives = 165/345 (47%), Gaps = 16/345 (4%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + + ++ P + N + L R L + ++ + D E+A ++ Sbjct: 17 EEYRDIESRMGSPEVASNPDAIRKLGRRHAELGSIVNAYLNYKQLCDDFEAANEMASDDP 76 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D + + + E + D+ D +E+ AG GG E+ +A LLRM Sbjct: 77 DFAEEAKRLEEQLPAAKEKLRTAL--IPRDPDDACDMIMEIKAGTGGEEAALFAGDLLRM 134 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193 Y R+AEKR + T + E G+K L I + +K E GVHR+ RI Sbjct: 135 YMRYAEKRGWTTVIQSENSTELGGVKDVQLAIRAKGTPAPEDGVWASMKYEGGVHRVQRI 194 Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 +S R TS + + V+P +D EIEI D +ID + +SG GGQ VNTT SAVR+ Sbjct: 195 PVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRM 254 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309 THIPTG+VV Q E+SQ +N+A A +L+++L L ++ +E A + +++ Sbjct: 255 THIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLDRS 312 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RTN + + VLDGDL + + + Sbjct: 313 ERIRTYNF-PENRIVDHRTNYKAYNLDQVLDGDLQPVIDSDIQAD 356 >gi|42521715|ref|NP_967095.1| peptide chain release factor RF-1 [Bdellovibrio bacteriovorus HD100] gi|61214632|sp|Q6MRK9|RF1_BDEBA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|39574245|emb|CAE77749.1| peptide chain release factor RF-1 [Bdellovibrio bacteriovorus HD100] Length = 357 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 99/348 (28%), Positives = 172/348 (49%), Gaps = 12/348 (3%) Query: 13 LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F D R +N + P + N + + LM+E +L+ + ++ + + + Sbjct: 1 MFSKLDAVESRYEEVNMALQRPDIASNQTQYRALMKELGNLEKIVLVYRDYRKKTENLKA 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 EL E D + + + ++ ++ E+ + + D + LE+ AGAGG Sbjct: 61 SKELLTAEQDAEMRELIREEVKELEAELPDLEQQLKIALIPKDPNDDKNTILEIRAGAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A+ L R Y +A + +K E + +G G K I G + + +K E GV Sbjct: 121 DEAALFADELFRGYVHYASTQGWKVEMISFSEGNAGGAKEIIASITGDSVFSKMKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS ++ V P V+ S I SD RI+T R+ G+GGQ VN T+ Sbjct: 181 HRVQRVPKTEAAGRIHTSTVTVAVIPEVEVSEIK-IPMSDVRIETMRSQGSGGQSVNRTE 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+ H+PTG+ V+CQ+ +SQ N+ +A+ +L AKL ++E +K + A+ +IG Sbjct: 240 SAVRVVHLPTGIDVKCQEGKSQSTNRERAFQILYAKLQQIEDEKARKEASDVRLE--QIG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 G +IR+Y P + D R + V+ G + + +A Sbjct: 298 TGDRSERIRTYNF-PQTRITDHRIGLTIHQLDQVMSGSFELLIDPLIA 344 >gi|213691478|ref|YP_002322064.1| peptide chain release factor 1 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|254790863|sp|B7GP74|RF1_BIFLI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|213522939|gb|ACJ51686.1| peptide chain release factor 1 [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457551|dbj|BAJ68172.1| peptide chain release factor [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 362 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 103/345 (29%), Positives = 162/345 (46%), Gaps = 16/345 (4%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + + + P + N + + L R L + K D E+A E+ Sbjct: 14 EEYQSIEEQMASPEVVSNPDKLRKLGRRHAELGAIVGAYKTWLQVKDDLAAAQEMAGEDA 73 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D + + + E + D+ D +E+ AG GG E+ +A LLRM Sbjct: 74 DFAEEAKRLEAELPGVEEKLRTAL--IPRDPDDARDTIMEIKAGTGGEEAALFAGDLLRM 131 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193 YTR+AEKR + + E G+K + I + +K E GVHR+ RI Sbjct: 132 YTRYAEKRGWSVNVQSENTTELGGVKDVQIAIRAKGTPAPEDGVWASMKYEGGVHRVQRI 191 Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 +S R TS + + V+P +D EIEI D +ID + +SG GGQ VNTT SAVR+ Sbjct: 192 PVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRM 251 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309 TH+PTG+ V Q E+SQ +N+A A +L+++L L ++ +E A + +++ Sbjct: 252 THLPTGITVNMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLDRS 309 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RTN + + VLDGDL + + + Sbjct: 310 ERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 353 >gi|284032945|ref|YP_003382876.1| peptide chain release factor 1 [Kribbella flavida DSM 17836] gi|283812238|gb|ADB34077.1| peptide chain release factor 1 [Kribbella flavida DSM 17836] Length = 359 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 111/349 (31%), Positives = 169/349 (48%), Gaps = 17/349 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + L + DP L + A+ + + L + E D Sbjct: 1 MFEAVQTLKAEYADLERQMSDPELHSDQANARRVGKRYAALAPVVRTYDEWLQTADDIEA 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EL +D + E R + E + + D DA LE+ AG GG ES Sbjct: 61 AKEL--AAEDPAFADEAVKLEARREELTEKLRLLLVPRDAGDDKDAILEIKAGEGGDESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGE 184 +A LL+MY ++AE + +KTE L+ + + G KS T+ + G Y LK E Sbjct: 119 LFAGDLLKMYLKFAETQNWKTEVLDSAESDLGGYKSITVAVKAKGTPEPGEAPYAKLKFE 178 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ +S R HTS + + V P + +++EI +D RID +R+SG GGQ VN Sbjct: 179 GGVHRVQRVPVTESQGRIHTSAAGVLVLP-EAEDVDVEIDPNDLRIDVFRSSGPGGQSVN 237 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVRITH+PTG+VV Q E+SQ +N+ QA +LR++L L + ++ ++ Sbjct: 238 TTDSAVRITHLPTGIVVSMQNEKSQLQNREQAMRVLRSRL--LAAAQEAADQEASDARRS 295 Query: 305 EI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +I +IR+Y P D R + + VL GDL ++A Sbjct: 296 QIRTVDRSERIRTYNF-PENRFSDHRVGYKAHNLDQVLGGDLAPVIQAL 343 >gi|310816145|ref|YP_003964109.1| peptide chain release factor 1 [Ketogulonicigenium vulgare Y25] gi|308754880|gb|ADO42809.1| peptide chain release factor 1 [Ketogulonicigenium vulgare Y25] Length = 352 Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats. Identities = 116/341 (34%), Positives = 172/341 (50%), Gaps = 12/341 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R FL K + + E L RE L + + Q D E Sbjct: 7 LAQLTDRFQFLEAKMQSG---LSGAEIAALGREYSELKPVVDTLARYQALEADLASAEEW 63 Query: 76 ALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + +E Q L AD A LE+ G GG E+ +A Sbjct: 64 LADPDMRAFAEEELPRLRTAFAEAEIEMQKALLPRDAADGRPAMLEIRPGTGGDEASLFA 123 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R++E + ++ E +E + E GIK + I+G + +K E GVHR+ R+ Sbjct: 124 ADLLRMYQRYSESKGWRFEIIEEAETELGGIKEVVVRIEGEGVFARMKYESGVHRVQRVP 183 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P ++++IEI+ D RIDT RASGAGGQHVNTTDSAVRITH Sbjct: 184 ETESGGRIHTSAATVAVLP-EAEAVDIEINPGDIRIDTMRASGAGGQHVNTTDSAVRITH 242 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG++V ++SQH+N+ A ++LRA+LY++E + + K ++G G + Sbjct: 243 LPTGIIVTSS-QKSQHRNRELAMDVLRARLYDMERSRVD--GARSADRKAQVGSGDRSER 299 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IR+Y P + D R N+ +L GDLD+ + A +A Sbjct: 300 IRTYNF-PQGRMTDHRINMTLYRLDQILQGDLDEIVDALVA 339 >gi|325971906|ref|YP_004248097.1| peptide chain release factor 1 [Spirochaeta sp. Buddy] gi|324027144|gb|ADY13903.1| Peptide chain release factor 1 [Spirochaeta sp. Buddy] Length = 354 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 111/342 (32%), Positives = 185/342 (54%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++L+ ++ K P Q++ K L +ER HL I ++ + + +L Sbjct: 5 LPEYEKQLADIDEKLSRPETMQDMKLYKSLNQERSHLAPIIDQLQLMHSLQTQIIGAHQL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 EE D +L+ T + L ++ E+E + ++ + D +E+ AG GG E+ Sbjct: 65 MKEETDQEMLEMTREELHELENELEVCEKKTKMLLIPPDPLEGKDIIMEIRAGTGGEEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+ +A+++ +K E L ++ G K + I G + YG L+ E GVHR+ Sbjct: 125 LFAANLFRMYSHYADEKGWKMEILSSNETGIGGYKELVISISGKDVYGSLRWESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS ++ V P +++ I + D +ID RA G GGQ VNTTDSAVR Sbjct: 185 RVPETESGGRIHTSAVTVAVLPEAEETDIE-IRQEDLKIDVMRAGGPGGQCVNTTDSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV CQ E+SQ KN+A+A +LR++L++LE K+ E+ K+++G G Sbjct: 244 LTHLPTGLVVICQDEKSQIKNRAKALRVLRSRLFDLEEDKKNRER--AEARKSQVGSGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P + D R N+ +++G LD+ ++ Sbjct: 302 SERIRTYNF-PQNRLTDHRINLTLYKLELIMEGQLDEVVEGL 342 >gi|325963840|ref|YP_004241746.1| bacterial peptide chain release factor 1 (bRF-1) [Arthrobacter phenanthrenivorans Sphe3] gi|323469927|gb|ADX73612.1| bacterial peptide chain release factor 1 (bRF-1) [Arthrobacter phenanthrenivorans Sphe3] Length = 357 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 104/352 (29%), Positives = 174/352 (49%), Gaps = 15/352 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + + + DP ++ + A+ L R L+ + + + D Sbjct: 1 MFESVQGLLDEHDAIQAQLGDPAVYADQRLARKLGRRSAQLNGIVEAYHKWEGIRDDLAA 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E+ +D E + ++ + + D+ + LEV G GG E+ Sbjct: 61 AKEM--ASEDPEFAAEVPELEASLEEAAAKLRRLLIPRDPDDARNVILEVKGGEGGDEAA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI------KGPNAYGWLKGEQ 185 +A LLRMYTR+AE R +KTE + + + G K + + Y LK E Sbjct: 119 LFAGDLLRMYTRYAESRGWKTEIISATESDLGGYKDVQVAVKGNSNDPAEGVYARLKFEG 178 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ +S R HTS + + V P VD+ E+EI+++D +ID YR+SG GGQ VNT Sbjct: 179 GVHRVQRVPVTESQGRIHTSAAGVLVLPEVDEPEELEINQNDLKIDVYRSSGPGGQSVNT 238 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITH+PTG+VV Q E+SQ +N+ +LRA++ + ++ + K++ Sbjct: 239 TDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARILAHQQEQIDAEN--SAQRKSQ 296 Query: 306 I---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 I +IR+Y P + D RT + + V++GDL+ +++ + + Sbjct: 297 IRTMDRSERIRTYNY-PENRIADHRTGYKAYNLDQVMNGDLEPVIQSAIEMD 347 >gi|291457338|ref|ZP_06596728.1| peptide chain release factor 1 [Bifidobacterium breve DSM 20213] gi|291381173|gb|EFE88691.1| peptide chain release factor 1 [Bifidobacterium breve DSM 20213] Length = 362 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 103/345 (29%), Positives = 163/345 (47%), Gaps = 16/345 (4%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + + + P + N + + L R L + K D E+A E+ Sbjct: 14 EEYQSIEEQMASPEVVSNPDKLRKLGRRHAELGAIVGAYKAWLQLKDDLEAAQEMAGEDA 73 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D + + ++ E + D+ D +E+ AG GG E+ +A LLRM Sbjct: 74 DFAEEAKRLESELPGAEEKLRTAL--IPRDPDDARDTIMEIKAGTGGEEAALFAGDLLRM 131 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193 YTR+AEKR + + E G+K + I + +K E GVHR+ RI Sbjct: 132 YTRYAEKRGWSVNIQSENTTELGGVKDVQIAIRAKGTPAPEDGVWASMKYEGGVHRVQRI 191 Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 +S R TS + + V+P +D EIEI D +ID + +SG GGQ VNTT SAVR+ Sbjct: 192 PVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRM 251 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309 TH+PTG+ V Q E+SQ +N+A A +L+++L L ++ +E A + +++ Sbjct: 252 THLPTGITVNMQDEKSQIQNRASALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLDRS 309 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RTN + + VLDGDL + + + Sbjct: 310 ERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 353 >gi|19746088|ref|NP_607224.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS8232] gi|24418636|sp|Q8P125|RF1_STRP8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|19748260|gb|AAL97723.1| putative peptide chain release factor 1 [Streptococcus pyogenes MGAS8232] Length = 359 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 96/348 (27%), Positives = 163/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L RE + ++ +E + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQTISDAEEM 66 Query: 76 ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + L+E + + + E + L D + LE+ AGG E+ Sbjct: 67 IKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I + D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDQKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+ HIPTG+ V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ +G G Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G +D+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDIILSGKMDEVIDALVMYDQ 350 >gi|291276374|ref|YP_003516146.1| peptide chain release factor 1 [Helicobacter mustelae 12198] gi|290963568|emb|CBG39400.1| peptide chain release factor 1 [Helicobacter mustelae 12198] Length = 352 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 106/340 (31%), Positives = 176/340 (51%), Gaps = 10/340 (2%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 ++R + DP + ++ L +E+ + K L L +L LE Sbjct: 9 IIKRHDEITALLVDPAITSDIKALTNLSKEQSEIQEITQQTKAYMATLDTIRDLEDLILE 68 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTESQDWANM 136 + + + + + R + + + ++LL + + + YLE+ AG GG E+ + Sbjct: 69 DKALAGMAKEELEVLRERAKNLEESIKTLLIPKDPNDGKNIYLELRAGTGGDEAGIFVGD 128 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L R Y R+A+ +K+K E + + G K LIKG Y LK E G HR+ R+ Sbjct: 129 LFRAYCRYADLKKWKVEIISSSENNVGGYKEIIALIKGEGVYSRLKFESGTHRVQRVPAT 188 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S R HTS ++ + P D +E+ ++ SD RI+ +RA G GGQ VNTTDSAVRITHIP Sbjct: 189 ESQGRIHTSAITVALMP-EVDEVEVVLNPSDLRIEVFRAGGHGGQCVNTTDSAVRITHIP 247 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG+ V Q E+SQHKNK +A +LR+++Y+ ++++++ ++ K ++G G +IR Sbjct: 248 TGINVSIQDEKSQHKNKEKALKILRSRIYDAQMEQQQ--VQNAQTRKNQVGSGDRSERIR 305 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352 +Y P + D R + S +V+ G+LD + A Sbjct: 306 TYNY-PQNRLTDHRIGLTLYSLEEVMLSGNLDPIIDPLTA 344 >gi|186681801|ref|YP_001864997.1| peptide chain release factor 2 [Nostoc punctiforme PCC 73102] gi|186464253|gb|ACC80054.1| peptide chain release factor 2 [Nostoc punctiforme PCC 73102] Length = 289 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 128/255 (50%), Positives = 175/255 (68%) Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159 + + + LLSG D+ A L + AGAGGT++QDWA ML+RMYTRW E +K E + Sbjct: 26 DQWELQQLLSGPYDAEGAVLTISAGAGGTDAQDWAFMLMRMYTRWGEAHGYKVTLAEESE 85 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 G+EAGIKSATL I G AYG+L+ E G HRLVRISP+++N +R TSF+ + V P +D+S+ Sbjct: 86 GDEAGIKSATLEITGRYAYGYLRSEMGTHRLVRISPFNANGKRQTSFAGVEVMPQIDNSV 145 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 ++EI + D I T R+ G GGQ+VN ++AVRI HIPTG+ V+C +ERSQ +NK +A N Sbjct: 146 QLEIPDKDLEITTTRSGGKGGQNVNKVETAVRIVHIPTGLAVRCTEERSQLQNKEKALNR 205 Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 L+AKL + ++R + E WG QIR+YV PYQMVKDLRTN E T+ DV+ Sbjct: 206 LKAKLLVIAKEQRAQEIAEIRGDMVEASWGNQIRNYVFHPYQMVKDLRTNTETTAIGDVM 265 Query: 340 DGDLDDFMKATLAIK 354 +G+LD F++A L + Sbjct: 266 NGELDPFIQAYLRQE 280 >gi|23466257|ref|NP_696860.1| peptide chain release factor 1 [Bifidobacterium longum NCC2705] gi|227546609|ref|ZP_03976658.1| peptide chain release factor 1 [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239621640|ref|ZP_04664671.1| peptide chain release factor 1 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|312134004|ref|YP_004001343.1| prfa [Bifidobacterium longum subsp. longum BBMN68] gi|317482079|ref|ZP_07941103.1| peptide chain release factor 1 [Bifidobacterium sp. 12_1_47BFAA] gi|322689793|ref|YP_004209527.1| peptide chain release factor [Bifidobacterium longum subsp. infantis 157F] gi|322691739|ref|YP_004221309.1| peptide chain release factor [Bifidobacterium longum subsp. longum JCM 1217] gi|81753501|sp|Q8G3P5|RF1_BIFLO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|23327005|gb|AAN25496.1| peptide chain release factor 1 [Bifidobacterium longum NCC2705] gi|227212926|gb|EEI80805.1| peptide chain release factor 1 [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239515515|gb|EEQ55382.1| peptide chain release factor 1 [Bifidobacterium longum subsp. infantis CCUG 52486] gi|291516325|emb|CBK69941.1| bacterial peptide chain release factor 1 (bRF-1) [Bifidobacterium longum subsp. longum F8] gi|311773307|gb|ADQ02795.1| PrfA [Bifidobacterium longum subsp. longum BBMN68] gi|316916438|gb|EFV37836.1| peptide chain release factor 1 [Bifidobacterium sp. 12_1_47BFAA] gi|320456595|dbj|BAJ67217.1| peptide chain release factor [Bifidobacterium longum subsp. longum JCM 1217] gi|320461129|dbj|BAJ71749.1| peptide chain release factor [Bifidobacterium longum subsp. infantis 157F] Length = 362 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 103/345 (29%), Positives = 163/345 (47%), Gaps = 16/345 (4%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + + + P + N + + L R L + K D E+A E+ Sbjct: 14 EEYQSIEEQMASPEVVSNPDKLRKLGRRHAELGAIVGAYKAWLQVKDDLAAAQEMAGEDA 73 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D + + ++ E + D+ D +E+ AG GG E+ +A LLRM Sbjct: 74 DFAEEAKRLEDELPGVEEKLRTAL--IPRDPDDARDTIMEIKAGTGGEEAALFAGDLLRM 131 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193 YTR+AEKR + + E G+K + I + +K E GVHR+ RI Sbjct: 132 YTRYAEKRGWSVNVQSENTTELGGVKDVQIAIRAKGTPAPEDGVWASMKYEGGVHRVQRI 191 Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 +S R TS + + V+P +D EIEI D +ID + +SG GGQ VNTT SAVR+ Sbjct: 192 PVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRM 251 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309 TH+PTG+ V Q E+SQ +N+A A +L+++L L ++ +E A + +++ Sbjct: 252 THLPTGITVNMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLDRS 309 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RTN + + VLDGDL + + + Sbjct: 310 ERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 353 >gi|255324516|ref|ZP_05365633.1| peptide chain release factor 1 [Corynebacterium tuberculostearicum SK141] gi|255298422|gb|EET77722.1| peptide chain release factor 1 [Corynebacterium tuberculostearicum SK141] Length = 358 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 111/346 (32%), Positives = 177/346 (51%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ V + + DP + + + + L + L I E+ D E+ Sbjct: 8 VDDIVSEYQGIEMQMADPEVAGDQKQFRKLSKRYAELRPIIMVNDELTQAREDLADAKEM 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D +E + ++ E E DS D +E+ AGAGG E+ +A Sbjct: 68 --AYEDHDFQEEADRLEKSVENLEEKLADLLAPRDEQDSEDIIMEIKAGAGGEEAALFAG 125 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190 L RMY R+A+K F E L +++ + G+K T+ + A+ K E GVHR+ Sbjct: 126 DLARMYERYADKTGFNWEVLGLNESDLGGVKDMTISFRSKSPSRDGAWSVFKFEGGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R TS + + VYP ++ + I + D R+D YR+SG GGQ VNTTDSAV Sbjct: 186 QRVPVTESQGRIQTSAAGVLVYPEPEEVESVNIDDKDIRVDVYRSSGKGGQGVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG++V CQ+ERSQ +NKA+A +L+A+L ++E + RE A +S+ + Sbjct: 246 RITHLPTGLIVTCQKERSQIQNKARALQVLQARLDQMEREAREAEAGEQRASQVRTMDRS 305 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + + VL+GD++D +KA ++ Sbjct: 306 ERIRTYNW-PENRITDHRIGYKANNLDSVLNGDMNDLIKALQDQER 350 >gi|169833220|ref|YP_001694464.1| peptide chain release factor 1 [Streptococcus pneumoniae Hungary19A-6] gi|238688292|sp|B1IBH9|RF1_STRPI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|168995722|gb|ACA36334.1| peptide chain release factor 1 [Streptococcus pneumoniae Hungary19A-6] Length = 359 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 99/348 (28%), Positives = 160/348 (45%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + + +E + L + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTRRFMELSKEEASNRDTVIAYREYKQVLQNIVDAEEM 66 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E G K ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ M A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVMDALVLYDQ 350 >gi|149204050|ref|ZP_01881018.1| peptide chain release factor 1 [Roseovarius sp. TM1035] gi|149142492|gb|EDM30537.1| peptide chain release factor 1 [Roseovarius sp. TM1035] Length = 417 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 111/341 (32%), Positives = 173/341 (50%), Gaps = 14/341 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 V+R ++ + ++ L RE L + I+ + + D + Sbjct: 76 LQQIVERFDYVEAQMMQGG--GDIAR---LGREYSELRPVVEEIRAYRLAVNDLDGARAM 130 Query: 76 ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + +E + R+ + Q L EAD+ A LE+ G GG E+ + Sbjct: 131 LADPEMRDLAREEVAVLEARLPEMEQRLQLALLPRDEADARPAILEIRPGTGGEEAALFG 190 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L+RMY R++E R + E +E E GI+ + I G + LK E GVHR+ R+ Sbjct: 191 ADLMRMYQRYSEARGWSFEVIEEQQSELGGIRELVVRIGGEGVFARLKFESGVHRVQRVP 250 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P + ++I+I+ +D RIDT R+SGAGGQHVNTTDSAVRITH Sbjct: 251 ETESGGRIHTSAATVAVLP-EAEDVDIQINANDLRIDTMRSSGAGGQHVNTTDSAVRITH 309 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV E+SQH+N+ A +L+ +LY+LE + + + ++G G + Sbjct: 310 LPTGIVVTSS-EKSQHRNREIAMQVLKTRLYDLERNRVDSER--SANRAAQVGSGDRSER 366 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IR+Y P + D R N+ VL GDLD+ + A A Sbjct: 367 IRTYNF-PQGRMTDHRINLTLYKLEQVLGGDLDEVIDALTA 406 >gi|328947853|ref|YP_004365190.1| peptide chain release factor 1 [Treponema succinifaciens DSM 2489] gi|328448177|gb|AEB13893.1| Peptide chain release factor 1 [Treponema succinifaciens DSM 2489] Length = 361 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 111/342 (32%), Positives = 170/342 (49%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ R + ++ D L ++ + K MRE Q L +S E + L L Sbjct: 7 LEDLSVRYTVVSELIGDASLIKDQKKYKETMREHQQLTELMSLYDEYKKILKGIEDATVL 66 Query: 76 ALEEDDCSI----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EE+D + +E + ++ E + + + D + LE+ + AGG E+ Sbjct: 67 ITEEEDRDMKELAREELKELEEKKPKLEEEIKLKLIPPDPLDEKNIILEIRSAAGGDEAS 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + L MY AE++ +KTE +E + E G I G YG L+ E GVHR+ Sbjct: 127 LFVRDLWEMYMHLAERKGWKTETMEAQETEVGGFNKIVTSIAGKFVYGTLRWESGVHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R TS ++ V P +++ I D R+D RA G GGQ VNTTDSAVR Sbjct: 187 RVPATESQGRLQTSTVTVAVLPEAEETEIQ-IRPEDVRVDVMRAGGPGGQCVNTTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTG+VV Q E+SQHKNK +A+ +LRA+L++LE KR+ K +G G Sbjct: 246 LTHIPTGIVVIQQDEKSQHKNKDKAFRVLRARLFDLEESKRQSERADA--RKNMVGSGAR 303 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R N+ + + G++D+ + A Sbjct: 304 SEKIRTYNF-PQDRVTDHRINLSLHNLPSFMMGNMDEMLDAL 344 >gi|149369846|ref|ZP_01889697.1| peptide chain release factor 1 [unidentified eubacterium SCB49] gi|149356337|gb|EDM44893.1| peptide chain release factor 1 [unidentified eubacterium SCB49] Length = 358 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 100/342 (29%), Positives = 175/342 (51%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72 R ++ P + + + L +E + L+ + + + + + + Sbjct: 5 LQIVKNRFDEVSDLIIQPDVISDQKQYISLTKEYKDLNALMKKREAYIMATEHIAEAEEI 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L + D + + D + E + + D+ +A +E+ AG GG E+ Sbjct: 65 LADGSDADMVEMAKMQMDEAKSNIAVLEEEIKLMLIPKDPEDAKNAVMEIKAGTGGDEAS 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYT++ E + +KT ++ +G G K+ + ++G + YG LK E GVHR+ Sbjct: 125 IFAGDLHRMYTKYCESKGWKTSVVDFSEGTSGGYKAIQMEVEGDDVYGTLKFEAGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V+P ++ I D RID + +SG GGQ VNTT SAVR Sbjct: 185 RVPQTETQGRVHTSAATVMVFPEAEEFDV-HIEMKDVRIDYFCSSGPGGQSVNTTYSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +TH+PTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL K++ + +++ G + Sbjct: 244 LTHVPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDLELAKKQAEDALKRG--SQVTSGDR 301 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y V D R N+ S+++DGD+ + Sbjct: 302 SAKIRTYNYS-QGRVTDHRINLTLYDLSNIIDGDIQKIIDEL 342 >gi|300789609|ref|YP_003769900.1| peptide chain release factor RF-1 [Amycolatopsis mediterranei U32] gi|299799123|gb|ADJ49498.1| peptide chain release factor RF-1 [Amycolatopsis mediterranei U32] Length = 356 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 112/346 (32%), Positives = 172/346 (49%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L T+ DP + + A+ L R L + + ++ D E+ Sbjct: 6 LKGLLAEHAELETQLADPAVHADQARARKLGRRYAELTPVVRAVHDLDTVRDDLAATREM 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A E+ + + E + D +D +E+ +G GG ES +A Sbjct: 66 ASEDAEFAAEAEELAARIPDLESRLTELLL--PRDPYDGSDVVMEIKSGEGGEESALFAG 123 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190 LLRMY R+AE+ +K E L+ D + G K TL IK + LK E GVHR+ Sbjct: 124 DLLRMYLRYAERHGWKAEVLDSVDSDLGGFKDVTLSIKSKAAAVDGVWSRLKFEGGVHRV 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS S + +Y + +E+EI +D RID +R+SG GGQ VNTTDSAV Sbjct: 184 QRVPATESQGRIHTSASGVLIY-PEPEEVEVEIDPNDLRIDVFRSSGPGGQSVNTTDSAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG+VV CQ E+SQ +N+A+A +L+A+L + ++ A+ S+ + Sbjct: 243 RITHLPTGIVVSCQNEKSQIQNRARALQVLQARLQAVAEEEAAAKASDARRSQVRTVDRS 302 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 ++R+Y P + D R N + + VLDGDLD + A + Sbjct: 303 ERVRTYNF-PENRISDHRVNYKAYNLDQVLDGDLDGVLDALATADR 347 >gi|291334339|gb|ADD93998.1| peptide chain release factor 1 [uncultured marine bacterium MedDCM-OCT-S11-C310] Length = 355 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 104/342 (30%), Positives = 174/342 (50%), Gaps = 12/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLIL 72 R LN DP + + + + +E + ++ + ++++ ++ DN L Sbjct: 5 LAEVEARYEELNRLLADPVVLSDQNRLRDVAKEHREVEELVEIYRSYRQLETQIQDNKEL 64 Query: 73 LELALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 + + + +E + ++ + + D + LE+ AG GG E+ Sbjct: 65 IADGEDPELTELAKEELPELETELQNLTDKINVLLMPKDPNDDKNVLLEIRAGTGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+R+AE+ ++ + + + +G + G+K + ++ + +K E GVHR+ Sbjct: 125 LFAGDLFRMYSRYAERSGWRVDVMSMSEGTQGGVKEVIVWLRA-TTFFCVKYESGVHRVQ 183 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ V P +++ I D RIDTYR+ GAGGQHVNTTDSAVR Sbjct: 184 RVPATESQGRIHTSAATVAVMPEAEEAEID-IRNEDLRIDTYRSQGAGGQHVNTTDSAVR 242 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VVQCQ E+SQ KN+A+A +L ++L + QK E A K + G Sbjct: 243 ITHLPTGMVVQCQDEKSQIKNRAKAMKVLSSRLLDFIRQK--EAAERAAERKELVRTGDR 300 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P + D R + VL GDL+ + A Sbjct: 301 SEKIRTYNF-PQDRITDHRIGFSAHNLPAVLQGDLEAVLIAL 341 >gi|254821298|ref|ZP_05226299.1| peptide chain release factor 1 [Mycobacterium intracellulare ATCC 13950] Length = 357 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 114/332 (34%), Positives = 165/332 (49%), Gaps = 9/332 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + + L + DP L N EA+ R L + +++ D EL Sbjct: 8 IDVLLAEHADLERRLADPELHSNPDEARKAGRRFARLAPIVGTYRKLMAAREDLEAAREL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A ++D + ++ D++D LEV +G GG ES +A Sbjct: 68 AADDDSFAAEASDLESRVAELDTQLTDML--APRDPHDADDIVLEVKSGEGGEESALFAA 125 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-----KGPNAYGWLKGEQGVHRL 190 L RMY R+AE+ + L+ + G K ATL I + +K E GVHR+ Sbjct: 126 DLARMYIRYAERHGWTVTVLDETTSDLGGYKDATLSIASKGDSADGVWSRMKFEGGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS + + VYP ++ E++I ESD RID YR+SG GGQ VNTTDSAV Sbjct: 186 QRVPVTESQGRVHTSAAGVLVYPEPEEIGEVQIDESDLRIDVYRSSGKGGQGVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG+VV CQ ERSQ +NKA+A +L A+L L ++ A+ +S+ + Sbjct: 246 RITHLPTGIVVTCQNERSQLQNKARALQVLAARLQSLAEEQALADASADRASQIRTVDRS 305 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 +IR+Y P + D R N + + VLDG Sbjct: 306 ERIRTYNF-PENRIADHRINFKSHNLDQVLDG 336 >gi|298252617|ref|ZP_06976411.1| protein chain release factor A [Gardnerella vaginalis 5-1] gi|297532981|gb|EFH71865.1| protein chain release factor A [Gardnerella vaginalis 5-1] Length = 366 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 104/345 (30%), Positives = 165/345 (47%), Gaps = 16/345 (4%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + + ++ P + N + L R L + ++ + D E+A ++ Sbjct: 18 EEYRDIESRMGSPEVASNPDAIRKLGRRHAELGSIVNAYLNYKQLCDDFEAANEMASDDP 77 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D + + + E + D+ D +E+ AG GG E+ +A LLRM Sbjct: 78 DFAEEAKRLEEQIPAAKEKLRTAL--IPRDPDDARDMIMEIKAGTGGEEAALFAGDLLRM 135 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193 Y R+AEKR + T + E G+K L I + +K E GVHR+ RI Sbjct: 136 YMRYAEKRGWTTVIQSENSTELGGVKDVQLAIRAKGTPAPEDGVWASMKYEGGVHRVQRI 195 Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 +S R TS + + V+P +D EIEI D +ID + +SG GGQ VNTT SAVR+ Sbjct: 196 PVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRM 255 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309 THIPTG+VV Q E+SQ +N+A A +L+++L L ++ +E A + +++ Sbjct: 256 THIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLDRS 313 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RTN + + VLDGDL + + + Sbjct: 314 ERIRTYNF-PENRIVDHRTNYKAYNLDQVLDGDLQPVIDSDIQAD 357 >gi|326335566|ref|ZP_08201753.1| peptide chain release factor RF1 [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692332|gb|EGD34284.1| peptide chain release factor RF1 [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 366 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 96/346 (27%), Positives = 170/346 (49%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D QR ++ P++ + L +E + L + +E + E+ Sbjct: 14 LDIVKQRFDEVSDLIIQPNIIADQKRYVQLTKEYKELKQLMDKREEYIVITGNIAEAEEI 73 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 + D +++ L+ K + + F + DS +A +E+ AG GG E+ Sbjct: 74 IKDGSDAEMVEMAHLQLEEAKERLPQLEEEIKFLLIPKDPEDSKNAVMEIRAGTGGDEAS 133 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+++ + + + +++++G G K L I G + YG LK E GVHR+ Sbjct: 134 IFAGDLYRMYSKYCQDKGWSVSVMDMNEGTSGGFKEIILEINGEDVYGTLKFEAGVHRVQ 193 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P ++ ++ D +I ++G GGQ VNTT SA++ Sbjct: 194 RVPQTETQGRVHTSAATVIVLPEAEEFDVE-LNMEDVKIIRTTSTGPGGQSVNTTYSAIQ 252 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 + HIPTG+ V+CQ E+SQHKN +A +LR++LYE+EL K+ E K+ + G + Sbjct: 253 LQHIPTGIEVRCQDEKSQHKNLDKALKVLRSRLYEMELAKKME--ADSARRKSMVSSGDR 310 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P V D R + ++++GD+ + + Sbjct: 311 SAKIRTYNY-PQGRVTDHRIGLTLYDLGNIINGDIQRLIDELQLAE 355 >gi|220913097|ref|YP_002488406.1| peptide chain release factor 1 [Arthrobacter chlorophenolicus A6] gi|254790860|sp|B8HB03|RF1_ARTCA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|219859975|gb|ACL40317.1| peptide chain release factor 1 [Arthrobacter chlorophenolicus A6] Length = 357 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 106/352 (30%), Positives = 175/352 (49%), Gaps = 15/352 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + + + DP ++ + A+ L R L+ + + D Sbjct: 1 MFESVQGLLDEHDSIQAQLGDPAVYADQRLARKLGRRSAQLNGIVEAYHRWEGLRDDLSA 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E+ +D E + ++ + + D+ + LEV G GG E+ Sbjct: 61 AREM--AAEDPEFAAEVPELEASLETAAAKLRRLLIPRDPDDARNVILEVKGGEGGDEAA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI------KGPNAYGWLKGEQ 185 +A LLRMYTR+AE R +KTE + + + G K + + Y LK E Sbjct: 119 LFAGDLLRMYTRYAESRGWKTEIISATESDLGGYKDVQVAVKGSSNDPAEGVYARLKFEG 178 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ +S R HTS + + V P VD+ E+EI+++D +ID YR+SG GGQ VNT Sbjct: 179 GVHRVQRVPVTESQGRIHTSAAGVLVLPEVDEPEELEINQNDLKIDVYRSSGPGGQSVNT 238 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITH+PTG+VV Q E+SQ +N+ +LRA++ + ++ + A E K++ Sbjct: 239 TDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARILAHQQEQID--AANSEQRKSQ 296 Query: 306 I---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 I +IR+Y P + D RT + + V++GDL+ +++ + + Sbjct: 297 IRTMDRSERIRTYNY-PENRIADHRTGYKAYNLDQVMNGDLEPVIQSAIEMD 347 >gi|146318502|ref|YP_001198214.1| peptide chain release factor 1 [Streptococcus suis 05ZYH33] gi|146320693|ref|YP_001200404.1| peptide chain release factor 1 [Streptococcus suis 98HAH33] gi|145689308|gb|ABP89814.1| Protein chain release factor A [Streptococcus suis 05ZYH33] gi|145691499|gb|ABP92004.1| Protein chain release factor A [Streptococcus suis 98HAH33] gi|292558283|gb|ADE31284.1| Peptide chain release factor 1 [Streptococcus suis GZ1] Length = 364 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 96/348 (27%), Positives = 164/348 (47%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + L + + E+ Sbjct: 12 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEATTRDTVTAYREYKTVLQNIVDAEEM 71 Query: 76 ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + L+E + + + E + L D + LE+ AGG E+ Sbjct: 72 IKESSGDADLEEMAKEELKQAKADKEAYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 131 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 132 ALFAGDLLTMYQKYAEGQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 191 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ + P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 192 QRVPVTESQGRVHTSTATVLIMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 250 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 251 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 308 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G +D+ + A + + Sbjct: 309 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVVDALVLYDQ 355 >gi|319404588|emb|CBI78194.1| peptide chain release factor 1 [Bartonella rochalimae ATCC BAA-1498] Length = 359 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 119/348 (34%), Positives = 181/348 (52%), Gaps = 18/348 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +R + ++ + P N L E L I+ I+ + + L + Sbjct: 10 KQLEKRFKIIESQMAENP----NAETYVKLASEYAELQPIIAPIRTLNSLHKEIAELETI 65 Query: 76 ALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + ++ + Q+I+ + Q L AD +E+ AG GG+E+ Sbjct: 66 ISDTQTDTEMRNLAQEELSSLSQKIQELEQELQILLLPKDIADEKSVIIEIRAGTGGSEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A +K E + + DGE G K I G + LK E GVHR+ Sbjct: 126 ALFAGNLFRMYERYANTHNWKVEIISLSDGEVGGYKEIIATISGKGVFSKLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 RI ++ R HTS +++ V P + I+IEI D RIDT RASGAGGQHVNTTDSAV Sbjct: 186 QRIPETETGGRIHTSAATVAVLP-EAEEIDIEIRPEDIRIDTMRASGAGGQHVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG++V Q E+SQH+N+A+A +LRA+L+++E QK + S KT++G G Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQK--AESERSASRKTQVGSGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +++GDL++ + A ++ + Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRIMEGDLNELINALISDHQ 348 >gi|313886616|ref|ZP_07820328.1| peptidyl-tRNA hydrolase domain protein [Porphyromonas asaccharolytica PR426713P-I] gi|312923912|gb|EFR34709.1| peptidyl-tRNA hydrolase domain protein [Porphyromonas asaccharolytica PR426713P-I] Length = 328 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 129/321 (40%), Positives = 195/321 (60%), Gaps = 11/321 (3%) Query: 41 EAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE 100 A+ MR + + I + + + + + ++ Q+ D R VE Sbjct: 3 RAQQQMRRVGEIRSWIEAFEAVDAATQEVALAYDFYK--EEAVEEQDVDDAYARAIKLVE 60 Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 + ++LS E D A L+++AGAGGTESQDWA+ML+RMY RWAE+ +K DG Sbjct: 61 DLELRNMLSAEEDRLGAVLKINAGAGGTESQDWASMLVRMYQRWAERSGYKVTITNWQDG 120 Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220 ++AGIK+ T+ I+G AYG+LK E GVHRLVR+SPY++ +R TSF+S++V P+VDDSIE Sbjct: 121 DDAGIKTVTMQIEGELAYGFLKSENGVHRLVRVSPYNAQGKRMTSFASVFVVPLVDDSIE 180 Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG--------VVVQCQQERSQHKN 272 +E++ DT+R+SGAGGQ+VN ++ VR+ + T +V++ + RSQ N Sbjct: 181 VEVNPGLLSWDTFRSSGAGGQNVNKVETGVRLHYQYTDPDTGETEEIVIENTETRSQMDN 240 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 + A +LR++LY+ EL++R + E++K +I WG QIRSYV + VKD RT + Sbjct: 241 RENALRLLRSQLYDKELERRRAAQSEVEANKKKIEWGSQIRSYVFDD-RRVKDHRTGYQT 299 Query: 333 TSPSDVLDGDLDDFMKATLAI 353 + + V+DGDLD F+KA L Sbjct: 300 SDVNGVMDGDLDAFIKAYLMQ 320 >gi|228477589|ref|ZP_04062222.1| peptide chain release factor 1 [Streptococcus salivarius SK126] gi|228250733|gb|EEK09931.1| peptide chain release factor 1 [Streptococcus salivarius SK126] Length = 359 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 99/348 (28%), Positives = 162/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L RE + ++ +E + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPEVVSDTKRFMELSREEANTRETVTAYREYKQVIQSISDAEEM 66 Query: 76 ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E L+E + + + E + L D + LE+ AGG E+ Sbjct: 67 IKEASGDPDLEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLAMYQKYAETQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E EI D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+ HIPTG+ V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ +G G Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350 >gi|152991659|ref|YP_001357380.1| peptide chain release factor 1 [Sulfurovum sp. NBC37-1] gi|166223612|sp|A6Q6B4|RF1_SULNB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|151423520|dbj|BAF71023.1| peptide chain release factor 1 [Sulfurovum sp. NBC37-1] Length = 355 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 108/341 (31%), Positives = 177/341 (51%), Gaps = 9/341 (2%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 + R + ++ P + ++ L +E+ L + + EL +E Sbjct: 10 IDRYNEISELLSSPDIASDINRMTELSKEQSGLAPLVEKANLYIETADAIAENKELLSDE 69 Query: 80 DDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 + + +E L+ + E + + + D + +LE+ AGAGG ES + + Sbjct: 70 ELGDLAKEELSELEPMLPKLEEEIKILMIPKDKNDDKNIFLELRAGAGGDESALFVADVF 129 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY+R+AE+ +K E + +DG G K IKG Y LK E G HR+ R+ ++ Sbjct: 130 RMYSRYAEQMGWKVEIVSTNDGTAGGYKELIAEIKGQGVYSQLKYEAGTHRVQRVPDTET 189 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R HTS ++ V P D +E++I ++ ++D YR+SG GGQ VNTTDSAVR+THIPTG Sbjct: 190 QGRVHTSAITVAVIP-EVDDVEVDIKPNEVKMDVYRSSGCGGQSVNTTDSAVRLTHIPTG 248 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315 +VV Q E+SQHKN+ +A +L+A++YE ELQK+ + K ++G G +IR+Y Sbjct: 249 IVVAIQDEKSQHKNRDKAMKVLKARVYESELQKQLDE--TAGQRKLQVGSGDRSEKIRTY 306 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 P + D R + + DV+ +G+L + +A + Sbjct: 307 NY-PQNRLTDHRIGLTLYALDDVMNNGNLKLVIDPLIAHAQ 346 >gi|326332906|ref|ZP_08199163.1| peptide chain release factor 1 [Nocardioidaceae bacterium Broad-1] gi|325949264|gb|EGD41347.1| peptide chain release factor 1 [Nocardioidaceae bacterium Broad-1] Length = 359 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 119/351 (33%), Positives = 179/351 (50%), Gaps = 16/351 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++ L + +P + AK L + L + I + Q D EL Sbjct: 7 VEGLIEEHEGLEKRLAEPETHADARLAKKLNQRYAELSSIIDAYRSWQQLGDDIEAAREL 66 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D + +E + + + E + + D DA LEV +G GG ES +A Sbjct: 67 --AGEDPAFAEEAEALVPQREAAEERLRRLLVPRDPTDDKDAILEVKSGEGGEESALFAG 124 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVH 188 LLRMYTR+AE++ +K E L+ + + G KS T+ + G Y LK E GVH Sbjct: 125 DLLRMYTRYAERQGWKLEFLDATESDLGGYKSVTVAVKAKGNPEPGRAPYALLKFEGGVH 184 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS + + V P + +++EI+++D RID YR+SG GGQ VNTTDS Sbjct: 185 RVQRVPVTESQGRVHTSAAGVLVVP-EAEPVDVEINDNDLRIDVYRSSGPGGQSVNTTDS 243 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307 AVRITHIPTG+VV Q E+SQ +NK QA +LR++L + + A+ S+ + Sbjct: 244 AVRITHIPTGIVVSMQNEKSQLQNKEQAMRVLRSRLLQAAQDAADAEASDARRSQVRTVD 303 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM----KATLAIK 354 +IR+Y P + D RT + + VLDGDL+ + A LA + Sbjct: 304 RSERIRTYNF-PENRISDHRTGYKSYNLDQVLDGDLEPVIGSAVDADLAAR 353 >gi|253751628|ref|YP_003024769.1| peptide chain release factor 1 [Streptococcus suis SC84] gi|253753530|ref|YP_003026671.1| peptide chain release factor 1 [Streptococcus suis P1/7] gi|253755645|ref|YP_003028785.1| peptide chain release factor 1 [Streptococcus suis BM407] gi|251815917|emb|CAZ51531.1| peptide chain release factor 1 [Streptococcus suis SC84] gi|251818109|emb|CAZ55903.1| peptide chain release factor 1 [Streptococcus suis BM407] gi|251819776|emb|CAR45680.1| peptide chain release factor 1 [Streptococcus suis P1/7] gi|319758066|gb|ADV70008.1| peptide chain release factor 1 [Streptococcus suis JS14] Length = 359 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 96/348 (27%), Positives = 164/348 (47%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + L + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEATTRDTVTAYREYKTVLQNIVDAEEM 66 Query: 76 ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + L+E + + + E + L D + LE+ AGG E+ Sbjct: 67 IKESSGDADLEEMAKEELKQAKADKEAYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKYAEGQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ + P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLIMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G +D+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVVDALVLYDQ 350 >gi|258652312|ref|YP_003201468.1| peptide chain release factor 1 [Nakamurella multipartita DSM 44233] gi|258555537|gb|ACV78479.1| peptide chain release factor 1 [Nakamurella multipartita DSM 44233] Length = 361 Score = 206 bits (523), Expect = 5e-51, Method: Composition-based stats. Identities = 117/346 (33%), Positives = 172/346 (49%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V L K DP + + ++ L R L ++ +++ D EL Sbjct: 9 VDALVAEYEDLQVKLSDPAVHADQAVSRKLGRRYAELTPIVTTARDLAATRGDLQAAQEL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 E+ + T + + D D +EV AG GG ES +A Sbjct: 69 GAEDAGFAEEARTLAGRVDELEQRLSELL--APRDPDDGKDVLVEVKAGEGGEESALFAG 126 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP-----NAYGWLKGEQGVHRL 190 LLRMY R+AE+R +KTE L + + G K T+ +K P + LK E GVHR+ Sbjct: 127 DLLRMYLRYAERRGWKTEVLSATESDLGGYKDVTVAVKSPAATPDGVWARLKFEGGVHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS + ++V P V+D ++EI+++D RID +R+SG GGQ VNTTDSAV Sbjct: 187 QRVPVTESQGRVHTSAAGVFVAPEVEDVNDVEIADADLRIDVFRSSGPGGQSVNTTDSAV 246 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG+VV CQ E+SQ +NK QA +LRA++ + A S+ + Sbjct: 247 RITHLPTGIVVSCQNEKSQLQNKEQAMRILRARMLAAARATADAAAADARRSQVRTVDRS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 ++R+Y P + D R + + VLDGDLD + A A + Sbjct: 307 ERVRTYNY-PENRIADHRVGYKAYNLDAVLDGDLDAVLDALSAADR 351 >gi|297567138|ref|YP_003686110.1| peptide chain release factor 1 [Meiothermus silvanus DSM 9946] gi|296851587|gb|ADH64602.1| peptide chain release factor 1 [Meiothermus silvanus DSM 9946] Length = 364 Score = 206 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 103/344 (29%), Positives = 168/344 (48%), Gaps = 8/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ Q L DP + + E + L + + ++ I+E + D L Sbjct: 5 LESLEQEYQSLEASLADPAVLSDQREYQRLSKRYAEMGELVATIREYKKAHSDLEEAKSL 64 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + + + +RI + L D + +E+ AG GG E+ +A Sbjct: 65 LHDPDMAEMARLEVEEIRRRIPELEAKLELLLLPKDPLDDKNVIVEIRAGTGGEEAALFA 124 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L M +A ++ F+TE L+++ + G+ + + G AYG LK E GVHR+ R+ Sbjct: 125 AELRDMIMEFARRKGFRTEILDVNLTDLGGVSKVSFEVIGAGAYGVLKYEAGVHRVQRVP 184 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS +++ V P + +++E+ +D I RASG GGQ VNTTDSAV++ H Sbjct: 185 ATEAQGRIHTSTATVAVMP-EAEEVDVELDPADLEITVSRASGPGGQGVNTTDSAVQVLH 243 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WGRQ 311 PTG++V C + RSQ KNK +A +LR++L LE+++ EE A E +IG + Sbjct: 244 KPTGMIVSCMESRSQIKNKEKALTILRSRL--LEMKRAEEAARRREDRLAQIGAGERSEK 301 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R + VL GDL + +A + Sbjct: 302 IRTYNF-PQSRVTDHRIGFTTHNLEGVLSGDLFELHEALKRADQ 344 >gi|330994789|ref|ZP_08318711.1| Peptide chain release factor 1 [Gluconacetobacter sp. SXCC-1] gi|329758050|gb|EGG74572.1| Peptide chain release factor 1 [Gluconacetobacter sp. SXCC-1] Length = 353 Score = 206 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 112/348 (32%), Positives = 171/348 (49%), Gaps = 13/348 (3%) Query: 14 FD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 FD D V R L + + +A RE L+ ++ + ++ Sbjct: 4 FDHRLDRIVARCDELQALLAEGLSGADFSQA---SREYAELEPIVARVNALRAAEEAERD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 ++ + + + Q D L+ + L EAD A LE+ AGG E+ Sbjct: 61 ASQMLADPEMRELAQAELDALRTQIPTLRHDIRLAMLPRDEADERSAILEIRPAAGGDEA 120 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L Y R+A+ R ++ E LE E G++ I G + LK E GVHR+ Sbjct: 121 GLFAAELFGAYQRYADLRGWRFEVLEYDQSELGGLREGIASITGRGVFARLKYESGVHRV 180 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS ++ V P + +++E++E D RID YRASGAGGQHVN T+SAV Sbjct: 181 QRVPATESQGRIHTSTVTVAVLP-EAEEVDVEVNEGDLRIDVYRASGAGGQHVNKTESAV 239 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PT +VV Q+E+SQHKN+A+A +LRA+LY E + + ++G G Sbjct: 240 RITHLPTNIVVAMQEEKSQHKNRAKAMKILRARLY--ERNRAAAHETRAADRRAQVGTGD 297 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + V+ G+LD+F+ A ++ Sbjct: 298 RSERIRTYNF-PQGRVTDHRIGLTLYKIDRVMAGELDEFVDALTQEEQ 344 >gi|319947033|ref|ZP_08021267.1| peptide chain release factor RF1 [Streptococcus australis ATCC 700641] gi|319747081|gb|EFV99340.1| peptide chain release factor RF1 [Streptococcus australis ATCC 700641] Length = 359 Score = 206 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 101/348 (29%), Positives = 164/348 (47%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + L + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDMVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKEAGGDSDLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 Q +A LL+MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D RID Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350 >gi|50954441|ref|YP_061729.1| peptide chain release factor 1 [Leifsonia xyli subsp. xyli str. CTCB07] gi|61214606|sp|Q6AG71|RF1_LEIXX RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|50950923|gb|AAT88624.1| peptide chain release factor 1 [Leifsonia xyli subsp. xyli str. CTCB07] Length = 358 Score = 206 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 113/352 (32%), Positives = 172/352 (48%), Gaps = 15/352 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + L + DP L + + +K + R L ++ E + D Sbjct: 1 MFDSVTGLIAEHDDLQQQLSDPELHSDPVRSKKVNRRYAELSRIVAAYTEWKQLTDDLEA 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ELA E+D + + + E + + DS DA +E+ G GG ES Sbjct: 61 ARELAAEDDAFAAEIPGLEQGL--EESEEKLRRLLIPRDPNDSRDAIMEIKMGEGGAESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI------KGPNAYGWLKGEQ 185 +A LL MY +A+ R++K E +E + GIK + + LK E Sbjct: 119 LFAGDLLSMYLHYADSRRWKAEIIEQTSSDLGGIKDVQVAFKGSSSDPAEGVWAHLKYEG 178 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ +S R HTS + + V+P VD+ E+EI+ +D +ID +R+SG GGQ VNT Sbjct: 179 GVHRVQRVPATESQGRIHTSAAGVLVFPEVDEPEEVEINPNDLKIDVFRSSGPGGQSVNT 238 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITH PTG+VV Q E+SQ +N+ A +LRA+L L Q+ E A E K + Sbjct: 239 TDSAVRITHAPTGIVVSMQNEKSQLQNREAAMRVLRARL--LAKQQEEADAEAAEFRKGQ 296 Query: 306 I---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 I +IR+Y P + D RT + + V++G L +++ + Sbjct: 297 IRTMERSERIRTYNF-PENRIADHRTGYKAYNLDAVMNGALGPVIESCILAD 347 >gi|260906196|ref|ZP_05914518.1| peptide chain release factor 1 [Brevibacterium linens BL2] Length = 359 Score = 206 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 113/341 (33%), Positives = 167/341 (48%), Gaps = 6/341 (1%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 + + L ++ DP + + AK L R LD + D ELA Sbjct: 13 ALLDEHARLQSELSDPAVHADAGRAKKLTRRYAELDKVAVTARHFAQLEEDAAAAEELAD 72 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 ++ + + + S D+ DA +E+ AG GG ES +A L Sbjct: 73 DDAEFGAEAKRLHAEAADVETELRDLL--VPSDPDDARDAIIEIKAGEGGDESALFAGDL 130 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL--LIKGPNAYGWLKGEQGVHRLVRISP 195 LRMY RW + R + ++ L+ + G K TL K AYGW+K E GVHR+ R+ Sbjct: 131 LRMYQRWIDSRGWSSQILDATHSDLGGYKDVTLALKAKDDGAYGWVKFEGGVHRVQRVPV 190 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS + + V+P VD+ E+ + ++D RID YR+SG GGQ VNTTDSAVRITH+ Sbjct: 191 TESQGRIHTSAAGVLVFPEVDEPEEVALDDNDLRIDVYRSSGPGGQSVNTTDSAVRITHV 250 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRS 314 PTG+ CQ E+SQ +NK A MLRA++ + ++ A S+ + +IR+ Sbjct: 251 PTGITASCQNEKSQLQNKEAALRMLRARILAKQAEEAAAEAADIRRSQVRTVDRSERIRT 310 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 Y P + D RT + + VL G+LD + + K Sbjct: 311 YNF-PENRITDHRTGYKAYNLDQVLAGELDPVIGSCREADK 350 >gi|297626232|ref|YP_003687995.1| peptide chain release factor 1 (RF-1) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921997|emb|CBL56559.1| Peptide chain release factor 1 (RF-1) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 359 Score = 206 bits (523), Expect = 6e-51, Method: Composition-based stats. Identities = 112/349 (32%), Positives = 168/349 (48%), Gaps = 11/349 (3%) Query: 13 LFDWDN-AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ Q + L + DP + + ++ + R L + + E Q D Sbjct: 1 MFESAQGLRQEFADLEKQLADPAVVSDQARSRKVGRRYSELTGVVHALDEHQQLTEDLSA 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ELA ++ + + + DSNDA +E+ +G GG ES Sbjct: 61 ARELADDDPAFAAEADQISARLD--EVTDKLTALLAPRDPLDSNDAIMEIKSGEGGEESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQG 186 +A LL MY +AE+ + TE ++ + G KS TL + YG LK E G Sbjct: 119 LFAGDLLNMYQHFAEREGWSTEIIDAEPTDLGGFKSVTLAFRATGHDAQAPYGALKFEGG 178 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S R HTS + + V P V++S I+ D RID YR++G GGQ VNTT Sbjct: 179 VHRVQRVPVTESQGRIHTSAAGVLVMPDVEESEIE-INPDDLRIDVYRSTGKGGQGVNTT 237 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE- 305 DSAVRITH+PTGVVV Q +RSQ +NK QA +LRA+L ++ + A S+ Sbjct: 238 DSAVRITHLPTGVVVTSQDQRSQLQNKEQALRVLRARLVAAAEEQAAQQAEQARKSQVRT 297 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +IR+Y P + D R + + VL G+L+ ++A A Sbjct: 298 VDRSERIRTYNF-PENRITDHRIGFKAHNLDAVLGGELEPLIEALQAAD 345 >gi|262340849|ref|YP_003283704.1| peptide chain release factor 2 [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272186|gb|ACY40094.1| peptide chain release factor 2 [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 365 Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats. Identities = 136/353 (38%), Positives = 225/353 (63%), Gaps = 3/353 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +S +++ + + D L + +P+ W++ ++K +R + +I ++ Sbjct: 10 ISEKIHRMHDVLKIDQIKAILDKEQNQILNPNFWKDYKKSKDSIRSLHEMKTSIKDFMKL 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L + I+ + ++ +E + + +F++LLS + DS +A L++ Sbjct: 70 KNALEELEIIFSF---SKEENLEKELEIQFHKTMKLLSNIEFKNLLSEKEDSLNAILQIS 126 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTES DW +ML+RMY WAEK F + + G+ GIKS TL I G A+G+LK Sbjct: 127 SGAGGTESCDWTSMLMRMYFMWAEKHNFSVKKINFISGDITGIKSVTLEIDGIYAFGYLK 186 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRL+RISP+DSNS+RHTSFSS++VYP+++D+I+I+I SD + +T+R+SGAGGQ+ Sbjct: 187 GENGVHRLIRISPFDSNSKRHTSFSSVYVYPMINDNIDIDIKTSDIQWETFRSSGAGGQN 246 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN ++ VR+ H PTG+ ++ + RSQ +N+ +A +L+++L+E+E+ K+ E +S Sbjct: 247 VNKVETGVRLRHHPTGITIENTESRSQMQNRQKALLLLKSRLFEIEMIKKNEKKEKIKSE 306 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K +I WG QIR+Y++ PY++VKDLRT + T V+DG++D F+K L KK Sbjct: 307 KKKIEWGSQIRNYIMHPYKLVKDLRTGYQTTQIQSVMDGEIDTFLKKFLMYKK 359 >gi|296121187|ref|YP_003628965.1| peptide chain release factor 1 [Planctomyces limnophilus DSM 3776] gi|296013527|gb|ADG66766.1| peptide chain release factor 1 [Planctomyces limnophilus DSM 3776] Length = 363 Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats. Identities = 108/347 (31%), Positives = 168/347 (48%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R L + +DP + +V + + RE L S ++E D L + Sbjct: 9 LQAKLARFEELEAQLQDPEVLADVSKMLEIQREHGGLSKIASTVREFNTLQDDLLAAETM 68 Query: 76 ALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + R + + +E+ AG GG E+ Sbjct: 69 LAEATDDETKEIAQAEIDELKPRFEPLKTELEDMVTAGDSLTRGSLIMEIRAGTGGDEAA 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MYTR+ + + +K E +E+ E G+K + I G AY L+ E G HR+ Sbjct: 129 LFARDLYEMYTRYVDLQGWKYEVMELTTSELGGLKEVVITITGSGAYHRLQFESGGHRVQ 188 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V I++EI + D RIDT RA G GGQ VN T+SAVR Sbjct: 189 RVPETETQGRVHTSAATVAVMA-EASEIDVEIRDEDLRIDTMRAGGPGGQKVNKTESAVR 247 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIP+G+VV+ Q E+SQHKNKA+A +LR++L EL++ + A E +T +G G Sbjct: 248 ITHIPSGLVVRIQDEKSQHKNKAKALRVLRSRLM--ELRESQAHAVRAEQRRTLVGSGDR 305 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + ++ G+LD+ + LA + Sbjct: 306 SERIRTYNF-PQNRLTDHRIGLTVYKLDQIMQGNLDELINPILAFDR 351 >gi|271963194|ref|YP_003337390.1| peptide chain release factor 1 [Streptosporangium roseum DSM 43021] gi|270506369|gb|ACZ84647.1| peptide chain release factor 1 [Streptosporangium roseum DSM 43021] Length = 350 Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats. Identities = 114/347 (32%), Positives = 173/347 (49%), Gaps = 12/347 (3%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 + D + + L K DP + + +A+ R L I+ +E++ D Sbjct: 1 MNLDELLSEYAELELKLADPTVHAHPAQARTFGRRYAELTPIITTYRELEGVQNDLDTAR 60 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 ELA E++ + + + + + D D +E+ AG GG ES + Sbjct: 61 ELASEDEAFAEEAKELEGRVPELEDKLRHLL--IPRDPNDDKDIIMEIKAGEGGEESALF 118 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK---GPNAYGWLKGEQGVHRL 190 A LLRMY R+AE+ +KTE ++ + G K T+ +K + LK E GVHR+ Sbjct: 119 AGDLLRMYLRYAERVGWKTELIDATHSDLGGYKDVTVALKARGDEGVWSRLKFEGGVHRV 178 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS + + VYP + +++++ +D RID YR+SG GGQ VNTTDSAV Sbjct: 179 QRVPVTESQGRIHTSAAGVLVYP-EAEEVDVQVDPNDLRIDVYRSSGPGGQSVNTTDSAV 237 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307 RITHIPTGVV CQ E+SQ +NK A +LRA+L + E A K++I Sbjct: 238 RITHIPTGVVASCQNEKSQLQNKESAMRILRARLQAIAE--EEANAAAMAERKSQIRTVD 295 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D R + + VLDGDL +++ L + Sbjct: 296 RSERIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLTAVIQSLLDAE 341 >gi|312139166|ref|YP_004006502.1| peptide chain release factor 1 prfa [Rhodococcus equi 103S] gi|325673529|ref|ZP_08153220.1| peptide chain release factor RF1 [Rhodococcus equi ATCC 33707] gi|311888505|emb|CBH47817.1| peptide chain release factor 1 PrfA [Rhodococcus equi 103S] gi|325555550|gb|EGD25221.1| peptide chain release factor RF1 [Rhodococcus equi ATCC 33707] Length = 359 Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats. Identities = 110/346 (31%), Positives = 172/346 (49%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ + + L + DP L + A+ + L ++ +++ D EL Sbjct: 10 IDDILAEHAGLEQQLADPALHNDPSAARKAGKRFAELAPVMATYAKLKSAQDDLDAAREL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A ++ + + + D +D LE+ +G GG ES +A+ Sbjct: 70 AADDAAFAAEIPALEETVTELDKTLTDLL--APRDPHDGDDVVLELKSGEGGEESALFAS 127 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190 L RMY R+AE+ ++ E L+ + G K AT+ IK + LK E GVHR+ Sbjct: 128 DLARMYVRYAERAGWRVEILDATVSDLGGYKDATISIKSKGDVRDGVWSRLKFEGGVHRV 187 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS + + +YP ++ E++I E+D RID YR+SG GGQ VNTTDSAV Sbjct: 188 QRVPVTESQGRVHTSAAGVLIYPEPEEVEEVQIDETDLRIDVYRSSGKGGQGVNTTDSAV 247 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG+VV CQ ERSQ +NKA+A +L A+L + + A+ G S+ + Sbjct: 248 RITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQAAAEEAADAEASAGRQSQVRTVDRS 307 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + + VLDGD++ + A + Sbjct: 308 ERIRTYNF-PENRITDHRIGFKAHNLDAVLDGDMEALLDALGKADR 352 >gi|260911915|ref|ZP_05918480.1| peptide chain release factor RF1 [Prevotella sp. oral taxon 472 str. F0295] gi|260633938|gb|EEX52063.1| peptide chain release factor RF1 [Prevotella sp. oral taxon 472 str. F0295] Length = 370 Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats. Identities = 92/350 (26%), Positives = 152/350 (43%), Gaps = 19/350 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R ++T DP + + L RE + L + ++ K L ++ Sbjct: 11 LDGLESRYEEVSTLITDPAVIADQERYVKLTREYKDLGDIMNARKRYVACLNSIAEAKDI 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + L + E + + D+ + +E+ AG GG E+ Sbjct: 71 LANETDAEMKDMAREELSTNEAERPKLEEEIKLLLVPKDPEDAKNVQMEIRAGTGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MY R+ + + + +G G K + G N YG LK E GVHR+ Sbjct: 131 LFAGDLFGMYKRYCDSKGWNLSVTASSEGAVGGFKEIDFAVSGDNVYGILKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P D I+E D + DT+R+SGAGGQ+VN +S VR Sbjct: 191 RVPATETQGRMHTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKVESGVR 249 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + + ++++C + R Q KNK +A + LR +Y+ E QK + +I K Sbjct: 250 LRYPWKNPNTGETEEILIECTETRDQPKNKERALSRLRTFIYDREHQKY--VDDIANRRK 307 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 + + G + IR+Y P V D R + GD+ + A Sbjct: 308 SLVSTGDRSAKIRTYNY-PQGRVTDHRIGYTTHDLQGFIGGDIQAMIDAL 356 >gi|119025459|ref|YP_909304.1| peptide chain release factor 1 [Bifidobacterium adolescentis ATCC 15703] gi|154486885|ref|ZP_02028292.1| hypothetical protein BIFADO_00718 [Bifidobacterium adolescentis L2-32] gi|229470348|sp|A1A0I9|RF1_BIFAA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|118765043|dbj|BAF39222.1| peptide chain release factor 1 [Bifidobacterium adolescentis ATCC 15703] gi|154084748|gb|EDN83793.1| hypothetical protein BIFADO_00718 [Bifidobacterium adolescentis L2-32] Length = 362 Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats. Identities = 104/345 (30%), Positives = 162/345 (46%), Gaps = 16/345 (4%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + + + +P + N + + L R L +S + D E+ + Sbjct: 14 EEYHNIEQQMAEPEVASNPDKMRKLGRRHAELGAIVSAYTAYKQVKDDLEAAREM--ASE 71 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D +E + E + + D+ D +E+ AG GG E+ +A LLRM Sbjct: 72 DPDFAEEAKRLEGELPAAEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAALFAGDLLRM 131 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193 Y R+AEKR + + E G+K L I + LK E GVHR+ RI Sbjct: 132 YMRYAEKRGWSVTVQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEGGVHRVQRI 191 Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 +S R TS + + V+P +D EIEI D +ID + +SG GGQ VNTT SAVR+ Sbjct: 192 PVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRM 251 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309 THIPTG+ V Q E+SQ +N+A A +L+++L L ++ +E A + +++ Sbjct: 252 THIPTGITVNMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLDRS 309 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RTN + + VLDGDL + + + Sbjct: 310 ERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 353 >gi|294673455|ref|YP_003574071.1| peptide chain release factor 1 [Prevotella ruminicola 23] gi|294472502|gb|ADE81891.1| peptide chain release factor 1 [Prevotella ruminicola 23] Length = 371 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 88/354 (24%), Positives = 154/354 (43%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R ++T DP + + L +E + L + + K L ++ Sbjct: 12 LDGLEARFEEVSTLITDPAVIADQQRFVKLTKEYKDLGDIMDARKRYIACLNGIKEAKDI 71 Query: 76 ALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + + E + + D+ + +E+ AG GG E+ Sbjct: 72 LANETDPEMKEMAREELAINEELQPQLEEEIKIALIPKDPEDAKNVEMEIRAGTGGDEAA 131 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L +MY + E + ++ + +G G K + G + YG LK E GVHR+ Sbjct: 132 LFAGDLFKMYKNYCESKGWQVSITYVSEGAVGGFKEVDFSVTGADVYGTLKYESGVHRVQ 191 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +SN R TS +++ V P D ++E + + DT+R+SGAGGQ+VN +S VR Sbjct: 192 RVPVTESNGRMQTSAATVAVLPEADKFEV-HVNEGEIKWDTFRSSGAGGQNVNKVESGVR 250 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + ++ ++++C + R Q KNK +A + L +Y+ E QK + +I K Sbjct: 251 LRYMWKNPNTGETEEILIECTETRDQPKNKERALSRLYTFIYDKEHQKY--VDDIANRRK 308 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + + G + IR+Y P V D R L GD+ + A + Sbjct: 309 SLVSTGDRSAKIRTYNF-PQGRVTDHRIGYTTHDLQGFLGGDIQAMIDALTVAE 361 >gi|296454711|ref|YP_003661854.1| peptide chain release factor 1 [Bifidobacterium longum subsp. longum JDM301] gi|296184142|gb|ADH01024.1| peptide chain release factor 1 [Bifidobacterium longum subsp. longum JDM301] Length = 362 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 103/345 (29%), Positives = 162/345 (46%), Gaps = 16/345 (4%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + + + P + N + + L R L + K D E+A E+ Sbjct: 14 EEYQSIEEQMASPEVVSNPDKLRKLGRRHAELGAIVGAYKTWLQVKDDLAAAQEMAGEDA 73 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D + + + E + D+ D +E+ AG GG E+ +A LLRM Sbjct: 74 DFAEEAKRLEAELPDAEEKLRTAL--IPRDPDDARDTIMEIKAGTGGEEAALFAGDLLRM 131 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193 YTR+AEKR + + E G+K + I + +K E GVHR+ RI Sbjct: 132 YTRYAEKRGWSVNVQSENTTELGGVKDVQIAIRAKGTPAPEDGVWASMKYEGGVHRVQRI 191 Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 +S R TS + + V+P +D EIEI D +ID + +SG GGQ VNTT SAVR+ Sbjct: 192 PVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRM 251 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309 TH+PTG+ V Q E+SQ +N+A A +L+++L L ++ +E A + +++ Sbjct: 252 THLPTGITVNMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLDRS 309 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RTN + + VLDGDL + + + Sbjct: 310 ERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 353 >gi|297568589|ref|YP_003689933.1| peptide chain release factor 1 [Desulfurivibrio alkaliphilus AHT2] gi|296924504|gb|ADH85314.1| peptide chain release factor 1 [Desulfurivibrio alkaliphilus AHT2] Length = 357 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 112/346 (32%), Positives = 175/346 (50%), Gaps = 12/346 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + R L + DP L Q+ K L +E + D Sbjct: 1 MFEQLADIKDRKKNLEDRLSDPDLMQDPARFKGLAKEHAQVSKLDDLYARYLKAQHDFAA 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127 +L EE+D +L ++ + + E D + LE+ AG GG Sbjct: 61 NRQLIEEEEDEEMLALARAENGELRESIAVLEKELRLALLPKDPNDEKNVLLEIRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ + L RMY+R+AE+ +K E L + G K LI G + Y LK E GV Sbjct: 121 DEAALFVADLFRMYSRYAEQLGWKVETLSSNPIGIGGYKEIIALISGEHVYSRLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS ++ V P + +E++I+ S+ + D +R+SG GGQ VNTTD Sbjct: 181 HRVQRVPATETQGRVHTSAVTVAVLP-EAEEVELKINPSELKFDVFRSSGPGGQSVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+VV CQ E+SQHKNKA+A +LRA+L L+ ++E+ I K+++G Sbjct: 240 SAVRVTHLPTGLVVSCQDEKSQHKNKAKALQVLRARL--LDKLQQEQHDQISSDRKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G ++R+Y P + + R N+ DV+ G LD+ ++ Sbjct: 298 SGDRSERVRTYNF-PQNRLTEHRINLTIYRLDDVMMGHLDEVVEPL 342 >gi|217977729|ref|YP_002361876.1| peptide chain release factor 1 [Methylocella silvestris BL2] gi|254790890|sp|B8EI32|RF1_METSB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|217503105|gb|ACK50514.1| peptide chain release factor 1 [Methylocella silvestris BL2] Length = 360 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 108/349 (30%), Positives = 176/349 (50%), Gaps = 16/349 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R ++ + + L RE L+ + I++ + ++ + L + Sbjct: 7 LDLILRRYDEVSARLNE---AVEPALYVQLSREFAGLEQVAAAIRDYRSQMQEVEGLAAM 63 Query: 76 ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + S ++ ++ R + + L AD A LEV AG GG E+ Sbjct: 64 LADPTTDSEMRGLAEEELRDAKERLEALEHQLKIALLPKDAADERSAILEVRAGTGGDEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+AE + + E + ++G G K I G + LK E G HR+ Sbjct: 124 ALFAGDLFRMYQRYAESKGWSVEIISANEGAAGGFKEIIAEIAGRGVFAKLKFESGAHRV 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P +++EI+E+D +IDT RA GAGGQHVN T+SA+ Sbjct: 184 QRVPDTETQGRIHTSAATVAVLP-EAQEVDVEINEADLKIDTMRAQGAGGQHVNKTESAI 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG +V Q ERSQHKN+A+A +LR+++Y+ + QK + ++++G G Sbjct: 243 RITHIPTGTIVFVQDERSQHKNRARAMALLRSRIYDEQRQKLDAER--AADRRSQVGSGD 300 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 +IR+Y P V D R N+ V+ G+ LD+ + A + Sbjct: 301 RSERIRTYNF-PQGRVTDHRINLTLYKLDKVITGEALDEVIDALTTHHQ 348 >gi|288928094|ref|ZP_06421941.1| peptide chain release factor 1 [Prevotella sp. oral taxon 317 str. F0108] gi|288330928|gb|EFC69512.1| peptide chain release factor 1 [Prevotella sp. oral taxon 317 str. F0108] Length = 370 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 92/350 (26%), Positives = 153/350 (43%), Gaps = 19/350 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R ++T DP + + L RE + L + ++ K L ++ Sbjct: 11 LDGLESRYEEVSTLITDPAVIADQERYVKLTREYKDLGDIMNARKRYVACLNSIAEAKDI 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + L + E + + D+ + +E+ AG GG E+ Sbjct: 71 LANESDAEMKEMAREELSANETERPKLEEEIKLLLVPKDPEDAKNVQMEIRAGTGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MY R+ + + + +G G K + G N YG LK E GVHR+ Sbjct: 131 LFAGDLFGMYKRFCDSKGWNLSVTASSEGAVGGFKEIDFAVSGDNVYGVLKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P D I+E D + DT+R+SGAGGQ+VN +S VR Sbjct: 191 RVPATETQGRMHTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKVESGVR 249 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + + ++++C + R Q KNK +A + LR +Y+ E QK + +I K Sbjct: 250 LRYPWKNPNTGETEEILIECTETRDQPKNKERALSRLRTFIYDREHQKY--VDDIANRRK 307 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 + + G + IR+Y P V D R + GD+ + A Sbjct: 308 SLVSTGDRSAKIRTYNY-PQGRVTDHRIGYTTHDLQGFIAGDIQAMIDAL 356 >gi|225350887|ref|ZP_03741910.1| hypothetical protein BIFPSEUDO_02461 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225158343|gb|EEG71585.1| hypothetical protein BIFPSEUDO_02461 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 362 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 106/345 (30%), Positives = 166/345 (48%), Gaps = 16/345 (4%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + + + +P + + + + L R L +S + D E+A E+ Sbjct: 14 EEYHNIEQQMAEPEVASDPDKMRKLGRRHAELGVIVSAYTAYKQVKDDLEAAKEMASEDP 73 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D + + ++ E + D+ D +E+ AG GG E+ +A LLRM Sbjct: 74 DFAEEAKRLESELPAVEEKLRTAL--IPRDPDDARDTIMEIKAGTGGEEAALFAGDLLRM 131 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193 Y R+AEKR + + E G+K L I + LK E GVHR+ RI Sbjct: 132 YMRYAEKRGWTVTLQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEGGVHRVQRI 191 Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 +S R TS + + V+P +D EIEI + D +ID + +SG GGQ VNTT SAVR+ Sbjct: 192 PVTESQGRIQTSAAGVIVFPEADEDDDEIEIDQKDLKIDIFMSSGPGGQSVNTTYSAVRM 251 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309 THIPTG+VV Q E+SQ +N+A A +L+++L L ++ EE A + +++ Sbjct: 252 THIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEEEAAQAADMRHSQVRSLDRS 309 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RTN + + VLDGDL + + + Sbjct: 310 ERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 353 >gi|312115445|ref|YP_004013041.1| peptide chain release factor 1 [Rhodomicrobium vannielii ATCC 17100] gi|311220574|gb|ADP71942.1| peptide chain release factor 1 [Rhodomicrobium vannielii ATCC 17100] Length = 361 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 114/349 (32%), Positives = 179/349 (51%), Gaps = 17/349 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 V R + + + + K L +E LD ++ IK ++ + L ++ Sbjct: 9 LKRLVGRWETIQAQLSEG---CDQETFKKLSKEFSDLDPLVAAIKTLEAAEEERDSLRQM 65 Query: 76 ALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + E + R++ Q L AD A LEV AG GG E+ Sbjct: 66 IEDPAAEPDMAELAREELEAAEPRVEQLEHELQIMLLPKDAADEKSAILEVRAGTGGEEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A+ + +K L + D + G + I G + +K E GVHR+ Sbjct: 126 ALFAADLFRMYQRYADLKGWKVNVLSVSDADAGGFREIVASISGKGVFARMKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + +++EI E D RIDT RASGAGGQHVNTTDSAV Sbjct: 186 QRVPETENQGRIHTSAATVAVLP-EAEEVDVEIREQDIRIDTMRASGAGGQHVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITHIPTG++V E+SQH+N+A+A +LRA+L+++E + +E K +IG G Sbjct: 245 RITHIPTGIIVTSS-EKSQHQNRARAMQVLRARLFDMERTRIDEAR--AAERKDQIGSGD 301 Query: 311 ---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 +IR+Y P V D R N+ + +++G+ LD + A + ++ Sbjct: 302 RSQRIRTYNF-PQGRVTDHRVNVTLYNLPQIMEGEGLDTIIDALITERQ 349 >gi|150397700|ref|YP_001328167.1| peptide chain release factor 1 [Sinorhizobium medicae WSM419] gi|166223607|sp|A6UCF2|RF1_SINMW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|150029215|gb|ABR61332.1| peptide chain release factor 1 [Sinorhizobium medicae WSM419] Length = 360 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 107/344 (31%), Positives = 174/344 (50%), Gaps = 18/344 (5%) Query: 18 NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 +R + + P L E L +S I+ + + + + Sbjct: 11 ELERRFGEIEARMSAGPS----ADVYVKLASEYSELQPVVSKIRAYEKATAELADIGAML 66 Query: 77 LEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 + +++ ++ + + + Q L AD A LE+ AG GG+E+ Sbjct: 67 ADRATDKDMRDLAELEKPEIEERVEALEQEIQILLLPKDAADEKSAILEIRAGTGGSEAA 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R+A + ++ E L +GE G K + G + LK E GVHR+ Sbjct: 127 LFAGDLFRMYERYAAGKGWRVEVLSASEGEAGGYKEIIATVSGRGVFSRLKFESGVHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P + I+I+I D R+DT R+SGAGGQHVNTTDSAVR Sbjct: 187 RVPETEAGGRIHTSAATVAVLP-EAEDIDIDIRSEDIRVDTMRSSGAGGQHVNTTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV E+SQH+N+A+A +LR++LY++E Q+ + + ++G G Sbjct: 246 ITHLPTGLVVTSS-EKSQHQNRAKAMQVLRSRLYDMERQR--ADSERSADRRNQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P + D R N+ V++G++D+ + A LA Sbjct: 303 SERIRTYNF-PQGRLTDHRINLTIYKLDRVMEGEIDEIVDALLA 345 >gi|300088066|ref|YP_003758588.1| peptide chain release factor 1 [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527799|gb|ADJ26267.1| peptide chain release factor 1 [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 356 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 100/351 (28%), Positives = 180/351 (51%), Gaps = 12/351 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D + +R + DP + ++ L +ER ++ I + + Sbjct: 1 MLDKLEIIERRYLEIEQAIADPSVATDITLLTRLAKERASMEALIGMYRRYKRNEQSLTE 60 Query: 72 LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 ++ E D + + + Q + E + L + +E+ AG GG Sbjct: 61 AEQMLETETDEEMRELAKEEVKRLKQEQEELYEQLKIALLPKDPNAERNIIIEIRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E++ +A L RMYTR+AE + +K E +++ + K A I G + Y LK E GV Sbjct: 121 DEAKLFAGDLFRMYTRYAELKGWKVEIIDLTEQSGGTFKEAVFEIDGEDVYSRLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +++ R HTS +++ V P V + IE++I D RID Y + GAGGQ+VN Sbjct: 181 HRVQRVPVTEASGRIHTSTATVAVMP-VAEDIEVDIKPEDLRIDIYHSGGAGGQNVNKVA 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 +AVR+TH+P+G+VV CQ+ERSQ KN+ +A ++L+A+L +E +K+++ + ++ + ++G Sbjct: 240 TAVRMTHLPSGLVVACQEERSQLKNRQKAMSVLKARLLAMEQEKQDKE--MTDNRRAQVG 297 Query: 308 ---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + + +++G LDD + A ++ Sbjct: 298 SADRSEKIRTYNY-PQDRLTDHRIGLSVHNLPKIMEGYLDDIIDALATDEQ 347 >gi|119383645|ref|YP_914701.1| peptide chain release factor 1 [Paracoccus denitrificans PD1222] gi|166223583|sp|A1B0G1|RF1_PARDP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119373412|gb|ABL69005.1| bacterial peptide chain release factor 1 (bRF-1) [Paracoccus denitrificans PD1222] Length = 351 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 109/343 (31%), Positives = 175/343 (51%), Gaps = 14/343 (4%) Query: 18 NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 V+R +L + P E + RE L ++ I + + D + Sbjct: 9 QIVERFEYLEARLNAGPA----AEEIAAISREYAELKPVVAQIAQWRSVQEDIRQAQAML 64 Query: 77 LEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 + + E S + + L AD+ A LE+ G GG E+ +A Sbjct: 65 ADHEMRELAQDELSRLRAGLPALEHALRVALLPRDAADARPAILEIRPGTGGEEAALFAG 124 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 LL MY R+AE + ++ + LE+ + G++ A I+G + LK E GVHR+ R+ Sbjct: 125 DLLDMYRRFAESQGWQFQMLELVRSDLGGVREAMARIEGEGVFARLKYESGVHRVQRVPE 184 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS +++ V P + ++++I +D RIDT RASGAGGQHVNTTDSAVRITH+ Sbjct: 185 TESGGRIHTSAATVAVLP-EAEEVDVDIPAADIRIDTMRASGAGGQHVNTTDSAVRITHL 243 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 PTG+VV E+SQH+N+A A +LRA+LY++E + A K+++G G +I Sbjct: 244 PTGIVVTSS-EKSQHQNRANAMAVLRARLYDMERSR--ADAERAADRKSQVGSGDRSERI 300 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R+Y P + D R + + ++ G++ + ++A A + Sbjct: 301 RTYNF-PQGRMTDHRIGLTLYALDRIMQGEIGEIVEALAAHDQ 342 >gi|319777684|ref|YP_004137335.1| peptide chain release factor 1 [Mycoplasma fermentans M64] gi|318038759|gb|ADV34958.1| Peptide chain release factor 1 [Mycoplasma fermentans M64] Length = 358 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 113/347 (32%), Positives = 174/347 (50%), Gaps = 6/347 (1%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCD 68 +F+ + L K +D + N+ E + +E + + + Q+ D Sbjct: 5 MFNSLSDIKNTYDNLVKKLDDHEVINNIKEYTKISKEVNKIKDIAETFTKYLNLQNDYND 64 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 +++ EE+ +N ++ E + L E D + +E+ AGG Sbjct: 65 AKVMINSKNEEEVLFAKSIIEENEVKLAQLEEELKILILPKDENDDKNVIMEIRGAAGGD 124 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L +MYT++AE FK + + G IKG AY LK E GVH Sbjct: 125 EANIFAGDLFKMYTKFAEDLNFKLKVISSSAASVGGFTQIVFSIKGDKAYSKLKFESGVH 184 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS +++ V P +DDS++IEI D +IDTYR+SGAGGQ VNTTDS Sbjct: 185 RVQRVPVTESAGRIHTSTATVTVMPEIDDSVDIEIKPQDLQIDTYRSSGAGGQSVNTTDS 244 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PTG+VV Q ERSQ N+ A +L++KLY+LE+QK+++ Sbjct: 245 AVRITHLPTGIVVSSQDERSQIANRETALTVLKSKLYDLEIQKKQQEEAGYRKLAGHGDR 304 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + V++G L ++A L ++ Sbjct: 305 SEKIRTYNY-PQDRVTDHRIGYSTS-LKQVMEGKLLTIIEALLTEEQ 349 >gi|311740614|ref|ZP_07714441.1| peptide chain release factor RF1 [Corynebacterium pseudogenitalium ATCC 33035] gi|311304134|gb|EFQ80210.1| peptide chain release factor RF1 [Corynebacterium pseudogenitalium ATCC 33035] Length = 362 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 111/346 (32%), Positives = 177/346 (51%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ V + + DP + + + + L + L I E+ D E+ Sbjct: 12 VDDIVSEYQGIEMQMADPEVAGDQKQFRKLSKRYAELRPIIMVNDELTQAREDLADAKEM 71 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D +E + ++ E E DS D +E+ AGAGG E+ +A Sbjct: 72 --AYEDHDFQEEADRLEKSVESLEEKLADLLAPRDEQDSEDIIMEIKAGAGGEEAALFAG 129 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190 L RMY R+A+K F E L +++ + G+K T+ + A+ K E GVHR+ Sbjct: 130 DLARMYERYADKTGFNWEVLGLNESDLGGVKDMTISFRSKSPSRDGAWSVFKFEGGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R TS + + VYP ++ + I + D R+D YR+SG GGQ VNTTDSAV Sbjct: 190 QRVPVTESQGRIQTSAAGVLVYPEPEEVESVNIDDKDIRVDVYRSSGKGGQGVNTTDSAV 249 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG++V CQ+ERSQ +NKA+A +L+A+L ++E + RE A +S+ + Sbjct: 250 RITHLPTGLIVTCQKERSQIQNKARALQVLQARLDQMEREAREAEAGEQRASQVRTMDRS 309 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + + VL+GD++D +KA ++ Sbjct: 310 ERIRTYNW-PENRITDHRIGYKANNLDSVLNGDMNDLIKALQDQER 354 >gi|282900531|ref|ZP_06308475.1| Peptide chain release factor 2 [Cylindrospermopsis raciborskii CS-505] gi|281194584|gb|EFA69537.1| Peptide chain release factor 2 [Cylindrospermopsis raciborskii CS-505] Length = 291 Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats. Identities = 132/266 (49%), Positives = 182/266 (68%) Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + ++ +++ + + LLSG DS A L ++AGAGGT++QDWA ML+RMYTRWAE Sbjct: 18 ETTINQMHRDLDQWELQQLLSGPYDSQGAVLTINAGAGGTDAQDWAFMLMRMYTRWAEAH 77 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 +K E +G+EAGIKSATL I G AYG+L+ E G HRLVRISP+++N +R TSF+ Sbjct: 78 GYKVTLAEESEGDEAGIKSATLEITGRYAYGYLRAEMGTHRLVRISPFNANGKRQTSFAG 137 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P +D+S+ +EI E D I T RA G GGQ+VN ++AVRI HIPTGV V+C +ERS Sbjct: 138 VEVMPQIDNSVTLEIPEKDLEITTSRAGGKGGQNVNKVETAVRIVHIPTGVAVRCTEERS 197 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q +NK +A L+AKL + ++R + E WG QIR+YV PYQ+VKDLRT Sbjct: 198 QLQNKEKALARLKAKLLVIAREQRAQEIAEIRGDMVEASWGNQIRNYVFHPYQIVKDLRT 257 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354 N+E T+ DV++GDLD+F++A L + Sbjct: 258 NLETTAIGDVMNGDLDNFIQAYLRQE 283 >gi|159027581|emb|CAO86953.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 366 Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats. Identities = 106/348 (30%), Positives = 178/348 (51%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + Q + L + DP + N E L + R L+ ++ + Q D + ++ Sbjct: 10 LQSVEQTYTELTRRLADPDVTSNPGELHRLAKSRASLEETVNTYEIWQKSQEDLIGAKQI 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E L+E + + L D + LE+ AG GG E+ Sbjct: 70 FKESASDPELREMAALEVAELEAKIATLEDQLTILLLPRDPLDEKNIMLEIRAGTGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L+R+Y+++AE + +K L + G K A L IKG N Y LK E GVHR+ Sbjct: 130 SIWAGDLVRLYSKYAETQNWKVSLLSESPADMGGFKEAILEIKGDNVYSKLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +++ R HTS +++ + P D +E+ I D + T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPLTEASGRVHTSTATVAIMP-EVDDVEVHIDPKDIELTTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ V C +ERSQ +N+ +A +LRAKLY+++LQ+++E + ++++G G Sbjct: 249 DLIHKPTGIRVFCTEERSQLQNRERAMQILRAKLYDIKLQEQQE--AVSSMRRSQVGTGS 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + + D R N E S +LDGD++D +++ +A + Sbjct: 307 RSEKIRTYNYKD-NRLTDHRLN-ENFSLDRILDGDIEDVIQSCIAKDQ 352 >gi|319760481|ref|YP_004124419.1| peptide chain release factor 1 [Candidatus Blochmannia vafer str. BVAF] gi|318039195|gb|ADV33745.1| peptide chain release factor 1 [Candidatus Blochmannia vafer str. BVAF] Length = 360 Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats. Identities = 115/337 (34%), Positives = 178/337 (52%), Gaps = 7/337 (2%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 +R L E P+ QN + + +E HL + +++ ++ + + L E+ + Sbjct: 13 LQERFYKLKQLIEHPNHIQNNKDFHSISKEYAHLAHIVTYFEQWLNIQKEILHTKEILTD 72 Query: 79 EDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 D + + L I+ + + L + D ++E+ AG GG E+ ++ L Sbjct: 73 IDLHDLALDELKKLNIIENNLEKKIKILLLPTDPNDKYGCFIELRAGTGGKEAAIFSGEL 132 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMYTR+AE +++ E + GE G K I AY LK E G HR+ R+ + Sbjct: 133 FRMYTRYAETQRWNIEIIHATYGEYGGYKEIIAKISCNGAYNQLKFESGGHRVQRVPYTE 192 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 S R HTS ++ V P + D I+ +D RIDT+R+SGAGGQHVNTTDSA+RITHIP+ Sbjct: 193 SQGRIHTSTCTVAVIPKIPDIKLPNINPNDLRIDTFRSSGAGGQHVNTTDSAIRITHIPS 252 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314 G+ V+CQ ERSQHKNK++A ++LR++LY + +++R + IG G +IR+ Sbjct: 253 GLSVECQDERSQHKNKSKALSILRSRLYAMNIKRR--KIEESNFRRNLIGSGDRSDRIRT 310 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 Y Q V D R + SDV+DG L +K + Sbjct: 311 YNFQ-QGRVTDHRIDFTSYKLSDVMDGALGILIKPII 346 >gi|189183642|ref|YP_001937427.1| peptide chain release factor RF-2 [Orientia tsutsugamushi str. Ikeda] gi|189180413|dbj|BAG40193.1| peptide chain release factor RF-2 [Orientia tsutsugamushi str. Ikeda] Length = 287 Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats. Identities = 159/280 (56%), Positives = 212/280 (75%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 + +A++E+D + ++++ E + Q E L + + D ND +L+++AGAGGTES Sbjct: 1 MSNIAIKENDIEFIHNIEQEWKKLQEEAKKLQVECLFTSDVDVNDCFLDINAGAGGTESN 60 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+M+LRMY R+AE FKTE + + DGEEAG+KSA++ I G NAYGW K E GVHRLV Sbjct: 61 DWASMMLRMYLRFAESMNFKTEVVYLLDGEEAGVKSASVKICGHNAYGWFKTESGVHRLV 120 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+++ +R TSF+S WVYPV++D+I++ I + D RIDTYRASGAGGQHVNTTDSA+R Sbjct: 121 RNSPFNALGKRMTSFASAWVYPVINDNIQVVIEDKDIRIDTYRASGAGGQHVNTTDSAIR 180 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITH PT +VVQCQ +RSQHKNKA+A ML+AK+YELE +K+ EI N ++KT+ WG Sbjct: 181 ITHFPTKIVVQCQNDRSQHKNKAEAMRMLKAKIYELEQKKQNEIINNHNAAKTDNSWGYH 240 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IRSYVLQPYQ+VKDLRTN+E + VLDGDL+ F+ A+L Sbjct: 241 IRSYVLQPYQLVKDLRTNVETSDTKRVLDGDLEKFIYASL 280 >gi|113954440|ref|YP_729638.1| peptide chain release factor 1 [Synechococcus sp. CC9311] gi|119361628|sp|Q0ID34|RF1_SYNS3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|113881791|gb|ABI46749.1| peptide chain release factor 1 [Synechococcus sp. CC9311] Length = 364 Score = 205 bits (522), Expect = 8e-51, Method: Composition-based stats. Identities = 102/348 (29%), Positives = 168/348 (48%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + A L + DP + + + + RER L+ + +Q + + L Sbjct: 10 LEAASSSFHNLERQLADPDVAADPQRLETIARERSRLEPLVLDYTSLQKVEAEQVQAKSL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130 E + ++E + + + + D LE+ AGAGG E+ Sbjct: 70 LKESRGDAAMEELAQQELQELDRHHADLIQRITLALLPKDPRDERSVMLEIRAGAGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY R++ +R + + ++ + G K L +KG + LK E GVHR+ Sbjct: 130 CLWAGDLARMYERFSSRRGWSVTPVSANEADLGGYKELILSVKGDAVFSELKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P D +E++I D I T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPSTESQGRVHTSTATVAVMP-EADPVEVQIDPRDLDISTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ V C QERSQ +N+ +A +LRAKLY E Q E A+ + ++++G G Sbjct: 249 DLMHKPTGIRVFCTQERSQMQNRERALEILRAKLY--ERQLAEANASERSARRSQVGTGD 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + + D R + VL+G +DD + A +A ++ Sbjct: 307 RSEKIRTYNAKD-NRMTDHRLGRNFS-LDPVLEGQMDDVIDACIAEEQ 352 >gi|322517017|ref|ZP_08069906.1| peptide chain release factor RF1 [Streptococcus vestibularis ATCC 49124] gi|322124434|gb|EFX95931.1| peptide chain release factor RF1 [Streptococcus vestibularis ATCC 49124] Length = 359 Score = 205 bits (521), Expect = 8e-51, Method: Composition-based stats. Identities = 97/348 (27%), Positives = 162/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L RE + ++ +E + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPEVVSDTKRFMELSREEANTRETVTVYREYKQVIQSISDAEEM 66 Query: 76 ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E L+E + + + E + L D + LE+ AGG E+ Sbjct: 67 IKEASGDPDLEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ + +E GIK ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLAMYQKYAETQGWRFDVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E EI D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+ HIPTG+ V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ +G G Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G +D+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKMDEVIDALVLYDQ 350 >gi|302529800|ref|ZP_07282142.1| peptide chain release factor 1 [Streptomyces sp. AA4] gi|302438695|gb|EFL10511.1| peptide chain release factor 1 [Streptomyces sp. AA4] Length = 356 Score = 205 bits (521), Expect = 8e-51, Method: Composition-based stats. Identities = 109/346 (31%), Positives = 172/346 (49%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L + DP + + A+ L R L + ++E+ D EL Sbjct: 6 LKGLLDEHARLEQELADPAVHADQARARKLGRRYAELSPVVRAVRELDQARDDLSAAKEL 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 + E+ + + + D +D +E+ +G GG ES +A Sbjct: 66 SAEDATFAAEADELTAKIPQLEAKLTELLL--PRDPYDGSDVVMEIKSGEGGEESALFAG 123 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190 LLRMY R+AE+ +K E L+ + + G K TL +K + LK E GVHR+ Sbjct: 124 DLLRMYLRYAERHNWKAEVLDSTESDLGGYKDVTLSLKSKTADVEGVWARLKFEGGVHRV 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS S + +Y + +E+EI +D RID +R+SG GGQ VNTTDSAV Sbjct: 184 QRVPATESQGRIHTSASGVLIY-PEPEEVEVEIDPNDLRIDVFRSSGPGGQSVNTTDSAV 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG+VV CQ E+SQ +N+A+A +L+A+L + ++ A+ S+ + Sbjct: 243 RITHLPTGIVVSCQNEKSQIQNRARALQVLQARLQAIAEEEAAAKASDARRSQVRTVDRS 302 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 ++R+Y P + D R N + + VLDG+LD + A A + Sbjct: 303 ERVRTYNF-PENRISDHRVNYKAYNLDQVLDGELDGVLDALAAADR 347 >gi|227823188|ref|YP_002827160.1| peptide chain release factor 1 [Sinorhizobium fredii NGR234] gi|227342189|gb|ACP26407.1| peptide chain release factor 1 [Sinorhizobium fredii NGR234] Length = 352 Score = 205 bits (521), Expect = 8e-51, Method: Composition-based stats. Identities = 116/347 (33%), Positives = 180/347 (51%), Gaps = 18/347 (5%) Query: 18 NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILL 73 +R + + + P L E L ++ I+ + L D +LL Sbjct: 3 ELERRFAEIEARMSAGPS----ADVYVKLASEYSELQPVVTKIRAYEKATAELADIEVLL 58 Query: 74 ELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 + + L E +RI+ E Q L AD A LE+ AG GG+E+ Sbjct: 59 SDRATDKEMRDLAEMERPEVEERIEALEEEIQILLLPKDAADEKSAILEIRAGTGGSEAA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R+A + ++ E L +GE G K + G + LK E GVHR+ Sbjct: 119 LFAGDLFRMYERYAAAKGWRVEVLSASEGEAGGYKEIIATVSGRGVFSRLKFESGVHRVQ 178 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +++ R HTS +++ V P + I+IEI D RIDT R+SGAGGQHVNTTDSAVR Sbjct: 179 RVPETEASGRIHTSAATVAVLP-EAEEIDIEIRAEDIRIDTMRSSGAGGQHVNTTDSAVR 237 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV E+SQH+N+A+A +LR++L+++E Q+ + K+++G G Sbjct: 238 ITHLPTGIVVTSS-EKSQHQNRAKAMQVLRSRLFDMERQR--ADSERSADRKSQVGSGDR 294 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ +++G++D+ + A LA + Sbjct: 295 SERIRTYNF-PQGRLTDHRINLTLYKLDRMMEGEIDEVVDALLADHQ 340 >gi|157803730|ref|YP_001492279.1| peptide chain release factor 1 [Rickettsia canadensis str. McKiel] gi|166223597|sp|A8EYR1|RF1_RICCK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|157784993|gb|ABV73494.1| peptide chain release factor 1 [Rickettsia canadensis str. McKiel] Length = 355 Score = 205 bits (521), Expect = 8e-51, Method: Composition-based stats. Identities = 124/347 (35%), Positives = 183/347 (52%), Gaps = 16/347 (4%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + V + L K + + E +E L+ + IKE + Sbjct: 6 NLAKIVDKYENLGKKLSS-GIMGD--EFVKASKEYAELEEVVEKIKEYNKAKSELEEANN 62 Query: 75 LALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LE + E ++ + L EADS A +EV AG+GG E Sbjct: 63 FKLEVGLDNATLEMIEDEIHTLENSLPKLERAVKIALLPKDEADSKSAIIEVRAGSGGEE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A +L MY R+AE + + E L I D G K A+ IKG + + LK E GVHR Sbjct: 123 AALFAAILFNMYQRYAELKGWHFEILAIVDTGIGGYKEASASIKGKDVFSKLKCESGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + RI +S+ R HTS +++ V P + ++I++ + D RIDTYR+SGAGGQHVNTT+SA Sbjct: 183 VQRIPETESHGRIHTSAATVAVLP-EVEDVDIKLEDKDLRIDTYRSSGAGGQHVNTTNSA 241 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG+ V Q E+SQHKNKA+A +LRA++YE E +K+E+ + + ++G G Sbjct: 242 VRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQ--KRANNRRGQVGSG 299 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352 +IR+Y P V D R N+ +V+ +G LD+F+ A +A Sbjct: 300 DRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVDALIA 345 >gi|289167970|ref|YP_003446239.1| peptide chain release factor I [Streptococcus mitis B6] gi|288907537|emb|CBJ22374.1| peptide chain release factor I [Streptococcus mitis B6] Length = 359 Score = 205 bits (521), Expect = 8e-51, Method: Composition-based stats. Identities = 98/348 (28%), Positives = 160/348 (45%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + L +E + ++ +E + L + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSETKRFMELSKEEASSRDTVTAYREYKQVLQNIVDAEEM 66 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E G K ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASINGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350 >gi|190893591|ref|YP_001980133.1| peptide chain release factor 1 protein [Rhizobium etli CIAT 652] gi|190698870|gb|ACE92955.1| peptide chain release factor 1 protein [Rhizobium etli CIAT 652] Length = 351 Score = 205 bits (521), Expect = 8e-51, Method: Composition-based stats. Identities = 112/344 (32%), Positives = 179/344 (52%), Gaps = 18/344 (5%) Query: 18 NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 +R + + P L E L ++ I+ + + + L L Sbjct: 3 ELERRFDEIEARMSAGPA----ADVYVKLASEYSELQPVVTKIRAYEKAVAELADLDTLL 58 Query: 77 LEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ++ +++ ++ +RI+ + Q L AD A LE+ AG GG+E+ Sbjct: 59 EDKAVDREMRDLAELELPEVKERIEALEQEMQILLLPKDAADEKSAILEIRAGTGGSEAA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R+A ++ +K E L +GE G K I G + LK E GVHR+ Sbjct: 119 LFAGDLFRMYERFAAEKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQ 178 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P + I+IEI D RIDT R+SGAGGQHVNTTDSAVR Sbjct: 179 RVPETEAGGRIHTSAATVAVLP-EAEEIDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVR 237 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+P+G+VV E+SQH+N+A+A +LR++LY+ E Q+ + K+++G G Sbjct: 238 ITHLPSGIVVTSS-EKSQHQNRAKAMQVLRSRLYDAERQR--ADSERSADRKSQVGSGDR 294 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ +++G++++ + A +A Sbjct: 295 SERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVDALMA 337 >gi|149196233|ref|ZP_01873288.1| peptide chain release factor 1 [Lentisphaera araneosa HTCC2155] gi|149140494|gb|EDM28892.1| peptide chain release factor 1 [Lentisphaera araneosa HTCC2155] Length = 358 Score = 205 bits (521), Expect = 8e-51, Method: Composition-based stats. Identities = 105/344 (30%), Positives = 179/344 (52%), Gaps = 11/344 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLIL 72 + R + ++ DP ++ + + L +E Q L + + +E++ L DN + Sbjct: 8 VERLRMRFKQVESELSDPSVFDDKDRYQDLSKEHQRLSSLVQTYDRQEEVKAELADNKEM 67 Query: 73 LELALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L +E+ +++ + + + + L + + DS + +E+ AGG E+ Sbjct: 68 LSGESDEELKEMIKLDMAGLEEELPLLEKKLMMLIVPPDPNDSRNCIVEIRPAAGGDEAA 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L++MY ++ + +K E +E + G+K+ +KG + + L E GVHR+ Sbjct: 128 LFAEDLMKMYQIYSSNKSWKVEVMEYTPSDLGGLKATVFSVKGEDVFRELNFESGVHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI ++ R HTS ++ V P + +++ I + + DTYR+SGAGGQ VNTTDSAVR Sbjct: 188 RIPKTETQGRVHTSTVTVAVLP-EAEEVDLHIDPKELKFDTYRSSGAGGQCVNTTDSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTG+ QQERSQH+NK A +LR+KL L+ + R+E + + + +IG G Sbjct: 247 VTHIPTGLACYSQQERSQHQNKEIAMQLLRSKL--LDEKIRQEKQKMSDERRGQIGTGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P + D R + + DV+ G D M LA Sbjct: 305 SERIRTYNY-PQSRITDHRFGVTVHNLPDVMAGKFADVMDKILA 347 >gi|308190290|ref|YP_003923221.1| peptide chain release factor 1 [Mycoplasma fermentans JER] gi|307625032|gb|ADN69337.1| peptide chain release factor 1 [Mycoplasma fermentans JER] Length = 371 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 113/347 (32%), Positives = 174/347 (50%), Gaps = 6/347 (1%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCD 68 +F+ + L K +D + N+ E + +E + + + Q+ D Sbjct: 18 MFNSLSDIKNTYDNLVKKLDDHEVINNIKEYTKISKEVNKIKDIAETFTKYLNLQNDYND 77 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 +++ EE+ +N ++ E + L E D + +E+ AGG Sbjct: 78 AKVMINSKNEEEVLFAKSIIEENEVKLAQLEEELKILILPKDENDDKNVIMEIRGAAGGD 137 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L +MYT++AE FK + + G IKG AY LK E GVH Sbjct: 138 EANIFAGDLFKMYTKFAEDLNFKLKVISSSAASVGGFTQIVFSIKGDKAYSKLKFESGVH 197 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS +++ V P +DDS++IEI D +IDTYR+SGAGGQ VNTTDS Sbjct: 198 RVQRVPVTESAGRIHTSTATVTVMPEIDDSVDIEIKPQDLQIDTYRSSGAGGQSVNTTDS 257 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PTG+VV Q ERSQ N+ A +L++KLY+LE+QK+++ Sbjct: 258 AVRITHLPTGIVVSSQDERSQIANRETALTVLKSKLYDLEIQKKQQEEAGYRKLAGHGDR 317 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + V++G L ++A L ++ Sbjct: 318 SEKIRTYNY-PQDRVTDHRIGYSTS-LKQVMEGKLLTIIEALLTEEQ 362 >gi|257461132|ref|ZP_05626230.1| peptide chain release factor 1 [Campylobacter gracilis RM3268] gi|257441506|gb|EEV16651.1| peptide chain release factor 1 [Campylobacter gracilis RM3268] Length = 355 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 115/340 (33%), Positives = 173/340 (50%), Gaps = 9/340 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 R L+ DP + ++ L +E++ ++ E L L + D Sbjct: 11 DRYDELSRMLSDPAITADIANMTALSKEQRSIEPIKEAASEYLKILNQIEENKALLSDAD 70 Query: 81 DCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139 + +E NL+ K + E + L D + +LE+ AG GG E+ +A LL Sbjct: 71 LGELAKEELKNLETQKPQLEEKIKILLLPKDPNDDKNIFLEIRAGTGGDEAALFAGDLLG 130 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 Y R+A+ R +K E + +G G K LL+KG AY LK E G HR+ R+ +S Sbjct: 131 AYLRYADLRGYKCEIVSTSEGSVGGYKEVILLVKGAGAYSRLKFEGGTHRVQRVPETESQ 190 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS ++ V P ++DS I+ +D RID R+SG GGQ VNTTDSAVRITHIPTG+ Sbjct: 191 GRVHTSAITVAVMPEIEDSEIQ-INPNDLRIDVMRSSGHGGQSVNTTDSAVRITHIPTGL 249 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYV 316 VV Q + QHKNK A +L+A+LY+++ Q+R E + K ++G G +IR+Y Sbjct: 250 VVTNQDGKDQHKNKEAAMKVLKARLYDMQEQERLE--KERKDRKDQVGTGDRSGRIRTYN 307 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLAIKK 355 P + D R N+ ++ G L D+ + +A + Sbjct: 308 Y-PQNRISDHRINLTLYRLDAIMAGGLFDEIIDPLIAHSQ 346 >gi|312891182|ref|ZP_07750704.1| bacterial peptide chain release factor 2 (bRF-2) [Mucilaginibacter paludis DSM 18603] gi|311296349|gb|EFQ73496.1| bacterial peptide chain release factor 2 (bRF-2) [Mucilaginibacter paludis DSM 18603] Length = 286 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 129/279 (46%), Positives = 199/279 (71%) Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 ++ + +E + E +F+++LS E D A L++ AGAGGTES DW Sbjct: 1 MFEFQQSGDATPEEVQEQYNIALKAAEELEFKNMLSAEEDQLSAVLQITAGAGGTESCDW 60 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A+ML+RMY WA+K +K ++ +G+ AG+K+ TL G +YG+LKGE GVHRLVR+ Sbjct: 61 ASMLMRMYMMWAQKNGYKITEIDYQEGDVAGVKTVTLQFDGDFSYGYLKGENGVHRLVRV 120 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+D+N++RHTSF+S++VYP+VDD+I I+++ +D +T+R+ GAGGQ+VN ++AVR+ Sbjct: 121 SPFDANAKRHTSFASVYVYPLVDDTINIDVNPADIEFETFRSGGAGGQNVNKVETAVRLY 180 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H P+G++++ Q+ RSQ +NK A +L+++LYE E++KR EI++ E +K +I WG QIR Sbjct: 181 HKPSGIIIKNQESRSQLQNKENAIRLLKSQLYEAEMRKRMEISDAIEGNKKKIEWGSQIR 240 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +YVL PY++VKDLRT+ E ++ VLDG+LD+F+KA L Sbjct: 241 NYVLHPYKLVKDLRTDYETSNAQAVLDGELDEFLKAYLM 279 >gi|288800098|ref|ZP_06405557.1| peptide chain release factor 1 [Prevotella sp. oral taxon 299 str. F0039] gi|288333346|gb|EFC71825.1| peptide chain release factor 1 [Prevotella sp. oral taxon 299 str. F0039] Length = 369 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 90/354 (25%), Positives = 156/354 (44%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R ++T DP + + L +E + L + + K+ L ++ Sbjct: 10 LEGLESRFEEVSTLITDPAVIADQNRYVRLTKEYKDLGDIMEARKKYVTCLNVIKEAKDI 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + LQ + + + E D+ + +E+ AG GG E+ Sbjct: 70 LANETDQDMREIAREELQANEPLLPKLEEEIKIALVPKDPEDAKNVEVEIRAGTGGDEAA 129 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L +MY ++ + + +G G K + G N YG LK E GVHR+ Sbjct: 130 LFAGDLFQMYKKYCDSMGWSISITNESEGTMGGFKEIAFSVTGTNVYGILKYESGVHRVQ 189 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P D I+E D + DT+R+SGAGGQ+VN +S VR Sbjct: 190 RVPATETQGRMHTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKVESGVR 248 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + + ++++C + R Q KNK +A + LR +Y+ E QK + +I K Sbjct: 249 LRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLRTFIYDREHQKY--VDDIASRRK 306 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + + G + IR+Y P V D R + GD+ + A + + Sbjct: 307 SLVSTGDRSAKIRTYNY-PQGRVTDHRIGYTTHDLQGFVGGDIQAMIDALIVAE 359 >gi|157827554|ref|YP_001496618.1| peptide chain release factor 1 [Rickettsia bellii OSU 85-389] gi|166223596|sp|A8GXI1|RF1_RICB8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|157802858|gb|ABV79581.1| peptide chain release factor 1 [Rickettsia bellii OSU 85-389] Length = 357 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 122/346 (35%), Positives = 181/346 (52%), Gaps = 15/346 (4%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + + + L+ K + E +E L++ + IKE + Sbjct: 9 NLTKILGKYEDLSEKLSS-GIGG--EEFVKASKEYADLEDIVQKIKEYNKAKAELEEANN 65 Query: 75 LALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E E + R + + L EADS A +E+ AG GG E Sbjct: 66 FKQEPSLDKATLEMIEEEIRNLEDSLPTLERSVKIALLPKDEADSKSAIIEIRAGTGGEE 125 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A L MY R+AE + ++ E L I + G K + IKG + + LK E GVHR Sbjct: 126 AALFAAKLFNMYQRYAELKGWRFEILSIDETGIGGYKEVSASIKGKDVFSKLKFESGVHR 185 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS +++ V P + ++I++ E D RIDTYRASGAGGQHVNTTDSA Sbjct: 186 VQRVPETESQGRIHTSAATVAVLP-EVEDVDIKLEEKDLRIDTYRASGAGGQHVNTTDSA 244 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG+ V Q E+SQHKNKA+A +LRA++YE E +K+++ + + +IG G Sbjct: 245 VRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKDQER--ANNRREQIGSG 302 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ +V++G LD+F++A +A Sbjct: 303 DRSERIRTYNF-PQGRVSDHRINLTLYKIDEVINGQLDEFIEALIA 347 >gi|262277365|ref|ZP_06055158.1| peptide chain release factor 2 [alpha proteobacterium HIMB114] gi|262224468|gb|EEY74927.1| peptide chain release factor 2 [alpha proteobacterium HIMB114] Length = 248 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 167/244 (68%), Positives = 202/244 (82%) Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167 +SG+AD D YLEVHAGAGGTESQDWA+M+ +MY +W+EK E + GEEAGIKS Sbjct: 1 MSGDADKFDCYLEVHAGAGGTESQDWADMIRKMYLKWSEKTDRSCELISESKGEEAGIKS 60 Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 +T+ I G N++G+LK E GVHRLVRISP+DSN RRHTSF+S+WVYPV+DD IEIEI E D Sbjct: 61 STIKIGGLNSFGYLKNESGVHRLVRISPFDSNQRRHTSFASVWVYPVIDDKIEIEIKEKD 120 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 R+DTYR+SGAGGQHVNTTDSAVRITH+PT +VVQCQ ERSQHKNK A ML+++LYEL Sbjct: 121 LRVDTYRSSGAGGQHVNTTDSAVRITHLPTKIVVQCQNERSQHKNKDTAMKMLKSRLYEL 180 Query: 288 ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 EL+KREE A E SKT+IGWG QIRSYVLQPYQ+VKD RTN+E TSP DVL+G++ +F+ Sbjct: 181 ELKKREESAQSAEDSKTDIGWGHQIRSYVLQPYQLVKDNRTNVESTSPDDVLNGEIGEFL 240 Query: 348 KATL 351 ++ L Sbjct: 241 ESAL 244 >gi|118469567|ref|YP_889202.1| peptide chain release factor 1 [Mycobacterium smegmatis str. MC2 155] gi|118170854|gb|ABK71750.1| peptide chain release factor 1 [Mycobacterium smegmatis str. MC2 155] Length = 359 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 115/334 (34%), Positives = 171/334 (51%), Gaps = 9/334 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + + L + DP L + A+ + R + ++ ++++ D EL Sbjct: 10 IEALLAEHADLERQLADPALHADAGAARKVGRRFAQVSPIVACYRKLEAARGDLEAAREL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 DD S E + ++ D++D LEV +G GG ES +A Sbjct: 70 --AADDASFADEVEELTAKVAELDNQLTDLLAPRDPHDADDIVLEVKSGEGGEESALFAA 127 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190 L RMY R+AE+ + L+ + G K ATL I+ + LK E GVHR+ Sbjct: 128 DLARMYIRYAERHGWTVTLLDETTSDLGGYKDATLSIRSRGDSADGVWARLKFEGGVHRV 187 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS + + VYP ++ E++I ESD RID YR+SG GGQ VNTTDSAV Sbjct: 188 QRVPVTESQGRVHTSAAGVLVYPEPEEVEEVQIDESDLRIDVYRSSGKGGQGVNTTDSAV 247 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG+VV CQ ERSQ +NKA+A +L A+L L ++ E A+ +S+ + Sbjct: 248 RITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQALAEEQAEADASADRASQIRTVDRS 307 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343 +IR+Y P + D R N + + VLDGD+ Sbjct: 308 ERIRTYNF-PENRIADHRINFKAHNLDQVLDGDM 340 >gi|86609051|ref|YP_477813.1| peptide chain release factor 1 [Synechococcus sp. JA-2-3B'a(2-13)] gi|119361626|sp|Q2JL68|RF1_SYNJB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|86557593|gb|ABD02550.1| peptide chain release factor 1 [Synechococcus sp. JA-2-3B'a(2-13)] Length = 360 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 111/344 (32%), Positives = 172/344 (50%), Gaps = 13/344 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72 N L + DP + + E + + + R L+ + + Q D L Sbjct: 10 LKNVEATFQELTVRLADPDVATDPAELQRIAKARSSLEATVQAFHDWQKLNRDLQQTEEL 69 Query: 73 LELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L + + + + R + E L D + LE+ AG GG E+ Sbjct: 70 LRESASDPELEAMARAELEQLRARQEQLEEKLTLLLLPRDPNDDKNIMLEIRAGTGGEEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMYTR+AEK + + +GE G K A L I+G Y LK E GVHR+ Sbjct: 130 ALWAADLARMYTRYAEKLGWSVRLASLSEGELGGYKEAILEIQGDQVYSKLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P D +E+ I D I T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPVTEAQGRVHTSTATVAVMP-EVDEVEVVIDPKDIEIKTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ V C +ERSQ +N+ +A +LRAKLYE++LQ+++ A+I + + ++G G Sbjct: 249 DLLHKPTGIRVFCTEERSQLQNRQRAMQILRAKLYEMKLQEQQ--ASISSARRMQVGTGS 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y + V D R N + +LDG+LDD ++A + Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLN-QNFPLQPILDGELDDLIQACI 348 >gi|223932122|ref|ZP_03624126.1| peptide chain release factor 1 [Streptococcus suis 89/1591] gi|302023743|ref|ZP_07248954.1| peptide chain release factor 1 [Streptococcus suis 05HAS68] gi|330832776|ref|YP_004401601.1| peptide chain release factor 1 [Streptococcus suis ST3] gi|223899103|gb|EEF65460.1| peptide chain release factor 1 [Streptococcus suis 89/1591] gi|329306999|gb|AEB81415.1| peptide chain release factor 1 [Streptococcus suis ST3] Length = 359 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 96/348 (27%), Positives = 164/348 (47%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + L + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEAATRDTVTAYREYKTVLQNMVDAEEM 66 Query: 76 ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + L+E + + + E + L D + LE+ AGG E+ Sbjct: 67 IKESSGDADLEEMAKEELKQAKADKEAYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKYAEGQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ + P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLIMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G +D+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVVDALVLYDQ 350 >gi|262199727|ref|YP_003270936.1| peptide chain release factor 1 [Haliangium ochraceum DSM 14365] gi|262083074|gb|ACY19043.1| peptide chain release factor 1 [Haliangium ochraceum DSM 14365] Length = 363 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 121/344 (35%), Positives = 187/344 (54%), Gaps = 7/344 (2%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 + +R ++ + N E L RE L ++ +E ++ + Sbjct: 12 EALERRYQEVSDLLGQNEVISNRSEFTKLSREHAELAKLVAAWQEYRELRTQESEARAMV 71 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQD 132 E D + + + L+ ++ +E K+ L D + LE+ AG GG E+ Sbjct: 72 ASESDAEMRELAREELRALQESLEVKEQHIKILLLPKDPNDGKNILLELRAGTGGDEAAL 131 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY R+AE++ +KTE + + DG G+K A +LI G + Y LK E GVHR+ R Sbjct: 132 FAGDLYRMYMRYAERQGWKTEIMSMSDGAAGGMKEAVVLIAGKDVYSSLKYESGVHRVQR 191 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS +++ V P + ++I++ E D RID YR+SG GGQ VNTTDSAVR+ Sbjct: 192 VPATESQGRVHTSAATVVVMP-EAEEVDIKLEEKDLRIDVYRSSGPGGQSVNTTDSAVRV 250 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQ 311 TH+PTG+VV CQ E+SQHKNKA+A +LR+++ ++E+ K+E S + G + Sbjct: 251 THLPTGIVVICQDEKSQHKNKAKAMRILRSRVLDVEIAKQEAEERDQRRSMVKSGDRSEK 310 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ + + S VLDGDL D + A A + Sbjct: 311 IRTYNF-PQDRLTDHRINLTRHNLSSVLDGDLYDVVDALRAHYQ 353 >gi|225861003|ref|YP_002742512.1| peptide chain release factor 1 [Streptococcus pneumoniae Taiwan19F-14] gi|298230460|ref|ZP_06964141.1| peptide chain release factor 1 [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255330|ref|ZP_06978916.1| peptide chain release factor 1 [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502960|ref|YP_003724900.1| peptide chain release factor 1 [Streptococcus pneumoniae TCH8431/19A] gi|254790904|sp|C1CRE0|RF1_STRZT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|225726985|gb|ACO22836.1| peptide chain release factor 1 [Streptococcus pneumoniae Taiwan19F-14] gi|298238555|gb|ADI69686.1| peptide chain release factor 1 [Streptococcus pneumoniae TCH8431/19A] gi|327389396|gb|EGE87741.1| peptide chain release factor 1 [Streptococcus pneumoniae GA04375] gi|332201491|gb|EGJ15561.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47368] Length = 359 Score = 205 bits (521), Expect = 9e-51, Method: Composition-based stats. Identities = 97/348 (27%), Positives = 159/348 (45%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + + +E + L + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNIVDAEEM 66 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + QE D + E + L D + LE+ AGG E+ Sbjct: 67 IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E G K ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVML-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350 >gi|312863805|ref|ZP_07724043.1| peptide chain release factor 1 [Streptococcus vestibularis F0396] gi|311101341|gb|EFQ59546.1| peptide chain release factor 1 [Streptococcus vestibularis F0396] Length = 359 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 98/348 (28%), Positives = 162/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L RE + ++ +E + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPEVVSDTKRFMELSREEANTRETVTVYREYKQVIQSISDAEEM 66 Query: 76 ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E L+E + + + E + L D + LE+ AGG E+ Sbjct: 67 IKEASGDPDLEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLAMYQKYAETQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E EI D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+ HIPTG+ V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ +G G Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G +D+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKMDEVIDALVLYDQ 350 >gi|117927849|ref|YP_872400.1| peptide chain release factor 1 [Acidothermus cellulolyticus 11B] gi|166223522|sp|A0LSK4|RF1_ACIC1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|117648312|gb|ABK52414.1| bacterial peptide chain release factor 1 (bRF-1) [Acidothermus cellulolyticus 11B] Length = 364 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 112/343 (32%), Positives = 174/343 (50%), Gaps = 9/343 (2%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + ++ + L + DP + + A+ L R L + + + D + Sbjct: 1 MFEAVEEVLREYADLERRLADPAVHADPRTARTLGRRYAQLGPIVEAYRRWKAL--DADV 58 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L D + E + E + + D D +++ AG GG ES Sbjct: 59 AAAHELAAADPAFRAEIPALEAEREAVAERLRSLLAPADPNDGKDVIMQIKAGEGGEESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA---YGWLKGEQGVH 188 +A LLRMY R+AE+R +KTE L+ + + G K T+ I+ + + LK E GVH Sbjct: 119 LFAGDLLRMYLRYAERRGWKTEILDATESDLGGYKDVTVAIRADGSEGAWSRLKFEGGVH 178 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS + V P + ++++I +D RID +R+SG GGQ VNTTDS Sbjct: 179 RVQRVPVTESQGRIHTSAVGVLVMP-EAEEVDVQIDPNDLRIDVFRSSGPGGQSVNTTDS 237 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307 AVRITH+PTG+VV CQ E+SQ +NK A +LR++L L ++ E A S+ + Sbjct: 238 AVRITHLPTGIVVSCQNEKSQLQNKETALRILRSRLLALAQEEAEAQAAAQRRSQVRTVD 297 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P + D R N + + VLDGDLD ++A Sbjct: 298 RSERIRTYNF-PENRISDHRVNYKAYNLDQVLDGDLDGVIQAL 339 >gi|283782510|ref|YP_003373265.1| peptide chain release factor 1 [Pirellula staleyi DSM 6068] gi|283440963|gb|ADB19405.1| peptide chain release factor 1 [Pirellula staleyi DSM 6068] Length = 358 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 99/346 (28%), Positives = 163/346 (47%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + R L DP L + + + RE L + + + L+E+ Sbjct: 5 LEQKLARFEELERMMTDPSLMSDSSKMGNVAREHGSLAKLAVKYRRFKQLNDEVAALVEM 64 Query: 76 ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEAD--SNDAYLEVHAGAGGTESQD 132 + D + E R + E + + + G D + +E+ AG GG E Sbjct: 65 SKVSDPDEREMAEAEIPNVRAERERIWSEVLDMTVGGEDAQRSRCVMEIRAGVGGAEGAL 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L +MY R+ EK+ +K E +E + G K L +G + L+ E G HR+ R Sbjct: 125 FAQDLYQMYKRFGEKKGWKVELMEASPTDMGGFKEVILGFEGEGVFRELQYESGGHRVQR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ V P + +E+ I + R+D + ASG GGQHVN T+SAVR+ Sbjct: 185 VPETEAKGRVHTSAATVAVLP-EPEDVEVNIKPDEYRLDKFCASGPGGQHVNKTESAVRL 243 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH TG+VV Q E+SQHKN A+A +L+++LY+ Q+ E A K+ +G G Sbjct: 244 THYETGIVVSMQDEKSQHKNLAKALRILKSRLYDFYRQR--EQAKRAAERKSLVGSGDRS 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P D R + +++GDL + + + Sbjct: 302 ERIRTYNF-PENRCTDHRIGLTLYKLDQIINGDLQPVLDGLIEHDR 346 >gi|119486315|ref|ZP_01620374.1| Peptide chain release factor 2 [Lyngbya sp. PCC 8106] gi|119456528|gb|EAW37658.1| Peptide chain release factor 2 [Lyngbya sp. PCC 8106] Length = 308 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 138/299 (46%), Positives = 197/299 (65%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + ++ Q + D ++EL E D S+L E NL R+ +++ + + LLS D N Sbjct: 1 MQQYQQWQKTIEDTDAIVELLELESDESLLAEAESNLTRLNHDLDRWELQQLLSAPYDKN 60 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 A L ++AGAGGT++QDWA MLLRMYTRW E +K E+ +G+EAGIKS TL I+G Sbjct: 61 GAVLTINAGAGGTDAQDWAEMLLRMYTRWGEAHGYKVYLAELSEGDEAGIKSVTLEIEGR 120 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 AYG+LK E+G HRLVRISP+++N +R TSF+ + + P++D + +EI E D + T RA Sbjct: 121 YAYGYLKCEKGTHRLVRISPFNANGKRQTSFAGVEIMPMIDQGVHLEIPEKDLEVTTSRA 180 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 G GGQ+VN ++AVRI H+PTG+ V+C QERSQ +NK +A +L+AKL + ++R + Sbjct: 181 GGKGGQNVNKVETAVRIVHLPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQE 240 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 E WG QIR+YV PYQMVKDLRT+ E T+ DV++G+LD F++A L + Sbjct: 241 IAEIRGDLVEAAWGNQIRNYVFHPYQMVKDLRTSEETTAIDDVMNGELDRFIQAYLRQE 299 >gi|304382675|ref|ZP_07365169.1| peptide chain release factor RF1 [Prevotella marshii DSM 16973] gi|304336300|gb|EFM02542.1| peptide chain release factor RF1 [Prevotella marshii DSM 16973] Length = 370 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 88/354 (24%), Positives = 156/354 (44%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R + T DP + + L +E + L++ + + + + ++ Sbjct: 11 LDGLESRYEEVATLITDPDVIADQERYVRLTKEYKDLEDIMDARRRYINCINAIQEAKDI 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + LQ + + E D+ + +E+ AG GG E+ Sbjct: 71 LNNETDADLKEMAREELQSNETLQPQLEEEIKIALVPKDPEDAKNVQMEIRAGTGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MY ++ + + + + +G G K + G + YG LK E GVHR+ Sbjct: 131 LFAGDLFNMYKKFCDSKGWTLSITSVSEGAVGGFKEIDFAVSGTDVYGILKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P D I+E D + DT+R+SGAGGQ+VN +S VR Sbjct: 191 RVPATETQGRMHTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKVESGVR 249 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + + ++++C + R Q KNK +A + LR +Y+ E QK + +I K Sbjct: 250 LRYPWKNPNTGETEEILIECTETRDQPKNKERALSRLRTFIYDREHQKY--VDDIASRRK 307 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + + G + IR+Y Q V D R L G++ + + A + Sbjct: 308 SLVSTGDRSAKIRTYNYQ-QGRVTDHRIGFTTHDLQGFLAGNIQEMIDALTVAE 360 >gi|332876543|ref|ZP_08444305.1| peptide chain release factor 1 [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332685510|gb|EGJ58345.1| peptide chain release factor 1 [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 370 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 94/364 (25%), Positives = 162/364 (44%), Gaps = 20/364 (5%) Query: 7 LNCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 + + D + V R + T DP++ + L +E + L + + KE D Sbjct: 1 MAENNSILDKLEGLVSRYEEVGTLITDPNVISDQKRYVKLTKEYKDLGDIMKARKEYMDS 60 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEV 121 L E+ EDD + + + + + + + + + D + +E+ Sbjct: 61 LQTLQDAKEMLATEDDPEMKEMAREEMAATEKHIPEMEERIKLLLVPADPEDDKNVIMEI 120 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 G GG E+ +A L RMYT++ E + +K +G G K + G YG L Sbjct: 121 RGGTGGDEAALFAGDLFRMYTKYCEMKGWKIAISSFTEGAAGGFKEIIFSVTGEKVYGTL 180 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHR+ R+ ++ R HTS +++ V P + I+E + + DT+R+SGAGGQ Sbjct: 181 KYESGVHRVQRVPATETQGRVHTSAATVAVLPEAQEFDVE-INEGEIKWDTFRSSGAGGQ 239 Query: 242 HVNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 +VN +S VR ++ ++++C + R Q KNK +A LR +Y+ E QK Sbjct: 240 NVNKVESGVRARYLWKNPNTGETEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY- 298 Query: 294 EIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 I +I KT + G + IR+Y P + D R + +DG++ D + Sbjct: 299 -IDDIANRRKTMVSTGDRSAKIRTYNY-PQSRITDHRIGYNMQNLPSFMDGNIQDCIDQL 356 Query: 351 LAIK 354 + Sbjct: 357 TVAE 360 >gi|307321056|ref|ZP_07600462.1| peptide chain release factor 1 [Sinorhizobium meliloti AK83] gi|306893331|gb|EFN24111.1| peptide chain release factor 1 [Sinorhizobium meliloti AK83] Length = 360 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 108/344 (31%), Positives = 177/344 (51%), Gaps = 18/344 (5%) Query: 18 NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 +R + + P L E L +S I+ + + + + Sbjct: 11 ELERRFGEIEARMSAGPS----ADVYVKLASEYSELQPVVSKIRAYEKATAELADIAAML 66 Query: 77 LEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 + +++ ++ + I+ + Q L AD A LE+ AG GG+E+ Sbjct: 67 ADRATDKDMRDLAEMEKPEVEEKIEALEQEIQILLLPKDAADEKSAILEIRAGTGGSEAA 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R+A + ++ E L +GE G K + G + LK E GVHR+ Sbjct: 127 LFAGNLFRMYERYAASKGWRVEVLSASEGEAGGYKEIIATVSGRGVFSRLKFESGVHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +++ R HTS +++ V P + I+I++ D R+DT R+SGAGGQHVNTTDSAVR Sbjct: 187 RVPETEASGRIHTSAATVAVLP-EAEEIDIDVRPEDIRVDTMRSSGAGGQHVNTTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIPTG+VV E+SQH+N+A+A +LR++LY++E Q+ + ++++G G Sbjct: 246 ITHIPTGIVVTSS-EKSQHQNRAKAMQVLRSRLYDMERQR--ADSERSADRRSQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P + D R N+ +++G++DD + A LA Sbjct: 303 SERIRTYNF-PQGRLTDHRINLTLYKLDRMMEGEIDDVVDALLA 345 >gi|57239178|ref|YP_180314.1| peptide chain release factor 1 [Ehrlichia ruminantium str. Welgevonden] gi|58579136|ref|YP_197348.1| peptide chain release factor 1 [Ehrlichia ruminantium str. Welgevonden] gi|58617189|ref|YP_196388.1| peptide chain release factor 1 [Ehrlichia ruminantium str. Gardel] gi|75432752|sp|Q5FGZ2|RF1_EHRRG RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|81557311|sp|Q5HB80|RF1_EHRRW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|57161257|emb|CAH58178.1| peptide release factor 1 [Ehrlichia ruminantium str. Welgevonden] gi|58416801|emb|CAI27914.1| Peptide chain release factor 1 (RF-1) [Ehrlichia ruminantium str. Gardel] gi|58417762|emb|CAI26966.1| Peptide chain release factor 1 (RF-1) [Ehrlichia ruminantium str. Welgevonden] Length = 359 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 123/352 (34%), Positives = 183/352 (51%), Gaps = 16/352 (4%) Query: 14 FD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 FD + ++ L EDP V +E L IS I E D Sbjct: 3 FDSGLEELSEKFYKLKHLLEDPSQLS-VESFVNASKEYSELLPIISVIDEYNAVQKDIKD 61 Query: 72 LLELALEEDDCSILQETSDNLQRIK-----LEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 L EL ++ + L+ + + L + D+ +A LE+ AG G Sbjct: 62 LQELINNQETDTELKNLAKEEFYELQKQLPKVKHKLKLSLLPKDKDDARNAILEIRAGTG 121 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ + L RMY ++AEK+ +K E + G K +L + G N + LK E G Sbjct: 122 GEEAALFVTDLYRMYIKYAEKKNWKIEQINSSSTGIGGHKEVSLCVSGSNVFAKLKFESG 181 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +++ R HTS +++ V P + ++++I E D RID YR+SG GGQ VNTT Sbjct: 182 VHRVQRVPETEASGRLHTSAATVAVLP-EIEEVDLKIDEKDLRIDVYRSSGPGGQSVNTT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIP+G+VV Q E+SQHKNK +A +LRA+LY+LE QKR+ + K++I Sbjct: 241 DSAVRITHIPSGIVVIQQDEKSQHKNKNKALKVLRARLYDLEKQKRDAEISQL--RKSQI 298 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIK 354 G G +IR+Y P + D R N+ D++ +GDLD+ ++A +A Sbjct: 299 GSGDRSERIRTYNF-PQSRITDHRINLTLYRLEDIMKEGDLDELIEALIAED 349 >gi|114327270|ref|YP_744427.1| peptide chain release factor 1 [Granulibacter bethesdensis CGDNIH1] gi|119361545|sp|Q0BUJ8|RF1_GRABC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|114315444|gb|ABI61504.1| bacterial peptide chain release factor 1 (RF-1) [Granulibacter bethesdensis CGDNIH1] Length = 352 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 117/345 (33%), Positives = 173/345 (50%), Gaps = 11/345 (3%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + D V R L + N RE L+ ++ I+E+ Sbjct: 6 NLDRIVARAEELRASLSEG---LNGDSFAAASRELAELEPVVARIEELWAAERGLAEAEA 62 Query: 75 LALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 + + D E +++ + L EAD A LE+ AGG E+ + Sbjct: 63 MLADPDMRELAESEAEILREKLPSLTREIRIALLPKDEADERSAILEIRPAAGGDEASLF 122 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A L MY R+AE R ++ E LE D G+K I G + + LK E GVHR+ R+ Sbjct: 123 AAQLFSMYQRYAEIRGWRFEILEYDDTGLGGLKGGMAEITGRSVFARLKYESGVHRVQRV 182 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +S R HTS ++ V P + +++++ E D RID YRASGAGGQHVN T+SAVRIT Sbjct: 183 PATESQGRIHTSTVTVAVLP-EAEDVDVQVDEGDLRIDVYRASGAGGQHVNKTESAVRIT 241 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H+P+G+VV Q+E+SQHKN+A+A +L+A+LY E Q+ A+ + ++G G Sbjct: 242 HLPSGIVVAMQEEKSQHKNRAKAMKILKARLY--EQQRAALHASRAADRRAQVGTGDRSE 299 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+ G+LDDF+ A A + Sbjct: 300 RIRTYNF-PQGRVSDHRINLTLYKIDRVMLGELDDFVDALTAEDQ 343 >gi|119361587|sp|Q2K3T1|RF1_RHIEC RecName: Full=Peptide chain release factor 1; Short=RF-1 Length = 359 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 113/344 (32%), Positives = 178/344 (51%), Gaps = 18/344 (5%) Query: 18 NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 +R + + P L E L ++ I+ + + + L L Sbjct: 11 ELERRFGEIEARMSAGPA----ADVYVKLASEYSELQPVVTKIRAYEKAVAELADLETLL 66 Query: 77 LEEDDCSILQETSDN-----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ++ +++ ++ RI+ + Q L AD A LE+ AG GG+E+ Sbjct: 67 EDKSVDREMRDLAELELPEVRARIEALEQEMQILLLPKDAADEKSAILEIRAGTGGSEAA 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R+A ++ +K E L +GE G K I G + LK E GVHR+ Sbjct: 127 LFAGDLFRMYERFASEKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P + I+IEI D RIDT R+SGAGGQHVNTTDSAVR Sbjct: 187 RVPETEAGGRIHTSAATVAVLP-EAEEIDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV E+SQH+N+A+A +LR++LY+ E Q+ + K+++G G Sbjct: 246 ITHLPTGIVVTSS-EKSQHQNRAKAMQVLRSRLYDAERQR--ADSERSADRKSQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ +++G++++ + A +A Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVDALMA 345 >gi|190572913|ref|YP_001970758.1| peptide chain release factor 1 [Stenotrophomonas maltophilia K279a] gi|229576662|sp|B2FQ14|RF1_STRMK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|190010835|emb|CAQ44444.1| putative peptide chain release factor 1 [Stenotrophomonas maltophilia K279a] Length = 360 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 106/323 (32%), Positives = 167/323 (51%), Gaps = 8/323 (2%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN- 91 P + + + L RE L+ + + D + + D + E Sbjct: 26 PDVVADNTRFRDLSREFAQLEPIAIALADESRAKADLAAAEGMRADPDLRELADEEIAAA 85 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 R+ + + D + +LEV AG GG E+ +A L RMY R+AE++ +K Sbjct: 86 QARLLELEQELALLLVPRDPRDEGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWK 145 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E + GE G K + G A+ LK E G HR+ R+ +S R HTS +++ + Sbjct: 146 VEIESDNPGEHGGYKEVVARVVGRGAFSRLKFESGTHRVQRVPATESQGRIHTSAATVAI 205 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P D+ +I I+ +D ++DT+R+SGAGGQHVN T+SA+RITH+PTGVVV+CQ ERSQH Sbjct: 206 IPEADEVDDIVINPADLKVDTFRSSGAGGQHVNKTESAIRITHVPTGVVVECQTERSQHA 265 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRT 328 N+ +A L+A+L + E Q+++ A ES + ++G G +IR+Y P + D R Sbjct: 266 NRDKAMKRLKAQLLDAERQRQD--AAQAESRRLQVGSGDRSQRIRTYNF-PQGRITDHRV 322 Query: 329 -NIEKTSPSDVLDGDLDDFMKAT 350 + ++L GDLD ++ Sbjct: 323 EGLTLYDLPNILAGDLDPLLQRL 345 >gi|86359340|ref|YP_471232.1| peptide chain release factor 1 [Rhizobium etli CFN 42] gi|86283442|gb|ABC92505.1| peptide chain release factor 1 protein [Rhizobium etli CFN 42] Length = 351 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 113/344 (32%), Positives = 178/344 (51%), Gaps = 18/344 (5%) Query: 18 NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 +R + + P L E L ++ I+ + + + L L Sbjct: 3 ELERRFGEIEARMSAGPA----ADVYVKLASEYSELQPVVTKIRAYEKAVAELADLETLL 58 Query: 77 LEEDDCSILQETSDN-----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ++ +++ ++ RI+ + Q L AD A LE+ AG GG+E+ Sbjct: 59 EDKSVDREMRDLAELELPEVRARIEALEQEMQILLLPKDAADEKSAILEIRAGTGGSEAA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R+A ++ +K E L +GE G K I G + LK E GVHR+ Sbjct: 119 LFAGDLFRMYERFASEKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQ 178 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P + I+IEI D RIDT R+SGAGGQHVNTTDSAVR Sbjct: 179 RVPETEAGGRIHTSAATVAVLP-EAEEIDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVR 237 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV E+SQH+N+A+A +LR++LY+ E Q+ + K+++G G Sbjct: 238 ITHLPTGIVVTSS-EKSQHQNRAKAMQVLRSRLYDAERQR--ADSERSADRKSQVGSGDR 294 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ +++G++++ + A +A Sbjct: 295 SERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVDALMA 337 >gi|238810252|dbj|BAH70042.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 373 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 113/347 (32%), Positives = 174/347 (50%), Gaps = 6/347 (1%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCD 68 +F+ + L K +D + N+ E + +E + + + Q+ D Sbjct: 20 MFNSLSDIKNTYDNLVKKLDDHEVINNIKEYTKISKEVNKIKDIAETFTKYLNLQNDYND 79 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 +++ EE+ +N ++ E + L E D + +E+ AGG Sbjct: 80 AKVMINSKNEEEVLFAKSIIEENEVKLAQLEEELKILILPKDENDDKNVIMEIRGAAGGD 139 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L +MYT++AE FK + + G IKG AY LK E GVH Sbjct: 140 EANIFAGDLFKMYTKFAEDLNFKLKVISSSAASVGGFTQIVFSIKGDKAYSKLKFESGVH 199 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS +++ V P +DDS++IEI D +IDTYR+SGAGGQ VNTTDS Sbjct: 200 RVQRVPVTESAGRIHTSTATVTVMPEIDDSVDIEIKPQDLQIDTYRSSGAGGQSVNTTDS 259 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PTG+VV Q ERSQ N+ A +L++KLY+LE+QK+++ Sbjct: 260 AVRITHLPTGIVVSSQDERSQIANRETALTVLKSKLYDLEIQKKQQEEAGYRKLAGHGDR 319 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + V++G L ++A L ++ Sbjct: 320 SEKIRTYNY-PQDRVTDHRIGYSTS-LKQVMEGKLLTIIEALLTEEQ 364 >gi|15966364|ref|NP_386717.1| peptide chain release factor 1 [Sinorhizobium meliloti 1021] gi|307313049|ref|ZP_07592676.1| peptide chain release factor 1 [Sinorhizobium meliloti BL225C] gi|20139338|sp|Q92MK5|RF1_RHIME RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|15075635|emb|CAC47190.1| Probable peptide chain release factor 1 (RF-1) protein [Sinorhizobium meliloti 1021] gi|306899368|gb|EFN30002.1| peptide chain release factor 1 [Sinorhizobium meliloti BL225C] Length = 360 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 108/344 (31%), Positives = 177/344 (51%), Gaps = 18/344 (5%) Query: 18 NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 +R + + P L E L +S I+ + + + + Sbjct: 11 ELERRFGEIEARMSAGPS----ADVYVKLASEYSELQPVVSKIRAYEKATAELADIAAML 66 Query: 77 LEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 + +++ ++ + I+ + Q L AD A LE+ AG GG+E+ Sbjct: 67 ADRATDKDMRDLAEMEKPEVEEKIEALEQEIQILLLPKDAADEKSAILEIRAGTGGSEAA 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R+A + ++ E L +GE G K + G + LK E GVHR+ Sbjct: 127 LFAGDLFRMYERYAASKGWRVEVLSASEGEAGGYKEIIATVSGRGVFSRLKFESGVHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +++ R HTS +++ V P + I+I++ D R+DT R+SGAGGQHVNTTDSAVR Sbjct: 187 RVPETEASGRIHTSAATVAVLP-EAEEIDIDVRPEDIRVDTMRSSGAGGQHVNTTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIPTG+VV E+SQH+N+A+A +LR++LY++E Q+ + ++++G G Sbjct: 246 ITHIPTGIVVTSS-EKSQHQNRAKAMQVLRSRLYDMERQR--ADSERSADRRSQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P + D R N+ +++G++DD + A LA Sbjct: 303 SERIRTYNF-PQGRLTDHRINLTLYKLDRMMEGEIDDVVDALLA 345 >gi|75908996|ref|YP_323292.1| peptide chain release factor 2 [Anabaena variabilis ATCC 29413] gi|75702721|gb|ABA22397.1| bacterial peptide chain release factor 2 (bRF-2) [Anabaena variabilis ATCC 29413] Length = 292 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 124/255 (48%), Positives = 178/255 (69%) Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159 + + + LLSG D+ A L ++AGAGGT++QDWA MLLRMYTRWAE + +K E + Sbjct: 29 DQWELQQLLSGPYDAEGAVLTINAGAGGTDAQDWAFMLLRMYTRWAEDQGYKVALAEESE 88 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 G+EAGIKSATL I G AYG+L+ E G HRLVRISP+++N +R TSF+ + V P +D+++ Sbjct: 89 GDEAGIKSATLEITGRYAYGYLRSETGTHRLVRISPFNANGKRQTSFAGVEVMPQLDNTV 148 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 +++I + D I T R+ G GGQ+VN ++AVR+ H+PTG+ V+C +ERSQ +NK +A Sbjct: 149 QLDIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAVRCTEERSQLQNKEKALAR 208 Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 L+AKL + +++ + E WG QIR+YV PYQMVKDLRTN E T+ +DV+ Sbjct: 209 LKAKLLVIAQEQKAQEIAQIRGDMVEASWGNQIRNYVFHPYQMVKDLRTNAETTAIADVM 268 Query: 340 DGDLDDFMKATLAIK 354 +G+LD F++A L + Sbjct: 269 NGELDMFIQAYLRQE 283 >gi|326335638|ref|ZP_08201825.1| peptide chain release factor RF2 [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692404|gb|EGD34356.1| peptide chain release factor RF2 [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 296 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 135/288 (46%), Positives = 206/288 (71%), Gaps = 2/288 (0%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 L + ++L+ ++ +E + +E +F ++LS E D+ A L++ AGA Sbjct: 2 LEELQVMLDFYK--ENAISAEEVEAFYAKTLTHIENLEFRNMLSDEGDALSAVLQITAGA 59 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTES DWA+ML+RMY WA ++ F + L +G+ AG+K+ TL I G A+G+LKGE Sbjct: 60 GGTESCDWASMLMRMYIMWANRQGFSVKELNYQEGDVAGVKTVTLEIDGEFAFGYLKGEN 119 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVRISP+DSN++RHTSF+S++VYP+ DD+IEIEI+ +D +T R+SGAGGQ+VN Sbjct: 120 GVHRLVRISPFDSNAKRHTSFASVYVYPLADDTIEIEINPADISFETMRSSGAGGQNVNK 179 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 ++AVR+ H PTG++++ + RSQ NK +A +L+++LYE+EL+KR+ + E++K + Sbjct: 180 VETAVRLRHHPTGIIIENSETRSQLDNKNKALQLLKSQLYEMELKKRQAKRDEIEANKMK 239 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 I WG QIR+YV+QPY++VKD+RTN E T+ V++G++DDF+KA L + Sbjct: 240 IEWGSQIRNYVMQPYKLVKDVRTNYETTNVDAVMNGEIDDFLKAYLML 287 >gi|296445919|ref|ZP_06887870.1| peptide chain release factor 1 [Methylosinus trichosporium OB3b] gi|296256587|gb|EFH03663.1| peptide chain release factor 1 [Methylosinus trichosporium OB3b] Length = 356 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 103/343 (30%), Positives = 169/343 (49%), Gaps = 15/343 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL---IL 72 D ++R + + + L RE LD+ ++ I+ + + + Sbjct: 7 LDLILRRHDEIGARLAAG---PDAASFVALSRELATLDDVVARIRTWRATSAEIAGLGEM 63 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA--DSNDAYLEVHAGAGGTES 130 L E + E + L ++ + L + D LEV AG GG E+ Sbjct: 64 LADPALEPEMRAFVEGELDAAESALASAEQELKLALLPKDSADEKGVILEVRAGTGGDEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L R Y ++A + + E L +G G K I G Y LK E GVHR+ Sbjct: 124 ALFAGDLFRAYQKYAGVKGWGVEILSASEGALGGYKEIVAEISGRGVYARLKFESGVHRV 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + +++ I + D +I+T R+ GAGGQHVN T+SA+ Sbjct: 184 QRVPATETQGRIHTSAATVAVLP-QAEEVDVAIDDKDLQIETMRSGGAGGQHVNKTESAI 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+P+G+VV Q+ERSQH+N+A+A +LR++L++ E Q+ + + K ++G G Sbjct: 243 RITHLPSGIVVMMQEERSQHRNRAKAMEVLRSRLFDAERQRLD--SARAADRKAQVGSGD 300 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R N+ V++G+LD+ A Sbjct: 301 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVIEGELDEIFDAL 342 >gi|225630064|ref|YP_002726855.1| peptide chain release factor 1 [Wolbachia sp. wRi] gi|225592045|gb|ACN95064.1| peptide chain release factor 1 [Wolbachia sp. wRi] Length = 357 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 123/348 (35%), Positives = 189/348 (54%), Gaps = 15/348 (4%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + + ++ + + E+P E L +E L I I E + L E Sbjct: 4 NLQDLKKKFNDIERNLENPTNLS-QKEFITLSKEYSELRPIIKIIDEYNTLKEEISDLEE 62 Query: 75 LALEEDDCSILQETSDNLQRIK------LEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 + +E+ ++E + K + L E DS +A LE+ AG GG Sbjct: 63 IMKDENSEGDIKELAKEEFFEKHKVLLPKIKAKLKLALLPKDEDDSRNAILEIRAGTGGE 122 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A ML RMY ++AE+R +K E + I + G K A+ LI G + LK E GVH Sbjct: 123 EAALFAAMLFRMYQKYAERRNWKFEPISISNTGIGGYKEASALINGTEVFARLKFESGVH 182 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S+ R HTS +++ + P + ++ +I E D RID YR+SG GGQ VNTTDS Sbjct: 183 RVQRVPETESSGRLHTSAATVAILP-EVEEVDFKIEEKDLRIDVYRSSGPGGQSVNTTDS 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+TH+PTG+VV Q E+SQHKNKA+A +LRA+LYE+E QK+E + K++IG Sbjct: 242 AVRVTHLPTGIVVIQQDEKSQHKNKAKALKVLRARLYEIERQKKEMERSTM--RKSQIGS 299 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352 G +IR+Y P + D R N+ ++ +G+LD+F++A ++ Sbjct: 300 GDRSERIRTYNF-PQSRITDHRINLTSHRLEQIIKEGELDEFIEALIS 346 >gi|15604386|ref|NP_220902.1| peptide chain release factor 1 [Rickettsia prowazekii str. Madrid E] gi|6225942|sp|Q9ZD21|RF1_RICPR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|3861078|emb|CAA14978.1| PEPTIDE CHAIN RELEASE FACTOR 1 (prfA) [Rickettsia prowazekii] gi|292572142|gb|ADE30057.1| Peptide chain release factor RF-1 [Rickettsia prowazekii Rp22] Length = 355 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 127/347 (36%), Positives = 184/347 (53%), Gaps = 16/347 (4%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + + + L K + + E +E L++ + IK+ + Sbjct: 6 NLVKILDKYENLGKKLSS-GIIGD--EFVKASKEYAELEDVVVKIKQYNKAKSELEEANN 62 Query: 75 LALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LE + E DN + L EADS A +EV AG+GG E Sbjct: 63 FRLEMALDNATLEMIDNEIHTLENLLPKLERAVRISLLPKDEADSKSAIIEVRAGSGGEE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A +L MY R++E + ++ E L I D G K A+ IKG + + LK E GVHR Sbjct: 123 AALFAAVLFNMYQRYSEFKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + RI +S R HTS +++ V P + I+I+I + D RIDTYRASGAGGQHVNTTDSA Sbjct: 183 VQRIPETESQGRIHTSAATVAVLP-EAEGIDIKIEDKDLRIDTYRASGAGGQHVNTTDSA 241 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG+ V Q E+SQHKNKA+A +LRA+LY E ++R++ +S + ++G G Sbjct: 242 VRITHIPTGITVALQDEKSQHKNKAKALKILRARLY--EEKRRQKEQERSDSRRGQVGSG 299 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD-GDLDDFMKATLA 352 +IR+Y P V D R N+ +V+ G LD+F++A +A Sbjct: 300 DRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKHGQLDEFIEALIA 345 >gi|298346212|ref|YP_003718899.1| peptide subunit release factor RF1 [Mobiluncus curtisii ATCC 43063] gi|304390026|ref|ZP_07371980.1| peptide chain release factor RF1 [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|298236273|gb|ADI67405.1| peptide chain release factor RF1 [Mobiluncus curtisii ATCC 43063] gi|304326508|gb|EFL93752.1| peptide chain release factor RF1 [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 367 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 107/347 (30%), Positives = 167/347 (48%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++ L + DP L N A+ + R L + ++ D E+ Sbjct: 11 VEALLEEYHQLEVQMSDPDLHSNQAHARKVGRRYAELSRVNTVVQSWLQARDDLEAGREM 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D E + D+ D +E+ AG GG ES +A Sbjct: 71 --AGEDPDFAAEIPGLEAAFEQANADLIEALTPRDPDDARDVIMEIKAGEGGEESALFAG 128 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVH 188 L+RMY +AEK + + L + + + G+K A++ + LK E GVH Sbjct: 129 DLMRMYQHYAEKMGWAVQVLGLTESDLGGVKDASIAFKAKGNPSPEEGVWAHLKYEGGVH 188 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS + + V P +++ +IEI +D RID YR+SG GGQ VNTTDS Sbjct: 189 RVQRVPVTESQGRIHTSAAGVLVMPEAEETGDIEIDPNDLRIDVYRSSGPGGQSVNTTDS 248 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307 AVRITH+PTG+VV Q E+SQ +NK +LR++L +LE +KRE A +S+ + Sbjct: 249 AVRITHLPTGIVVSMQNEKSQLQNKEAGMRVLRSRLMQLEAEKREAEAAEARASQVRTVD 308 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RT + + VL+GDL +++ + Sbjct: 309 RSERIRTYNF-PENRIADHRTGYKAYNLDQVLNGDLAPVIQSAIDAD 354 >gi|296127053|ref|YP_003634305.1| peptide chain release factor 1 [Brachyspira murdochii DSM 12563] gi|296018869|gb|ADG72106.1| peptide chain release factor 1 [Brachyspira murdochii DSM 12563] Length = 358 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 110/345 (31%), Positives = 177/345 (51%), Gaps = 13/345 (3%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + K D ++ ++ + LM+++ +++ + ++++ L + E+ Sbjct: 10 VENTYEDIVQKLNDANI-KDNRVIQDLMKKKSEIEDIVEEYRKLKTVLKEIDDSNEMINN 68 Query: 79 EDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 + L+E + Q+ + + + L + D + +E+ G GG ES + Sbjct: 69 PETDKDLKEMALAEIEELNQKKEDIINSLRLLLLPKDKNDGKNIIIEIRVGTGGDESALF 128 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 L RMY+R+ E+ K E ++ E G K + G NAY LK E G HR+ RI Sbjct: 129 VGDLFRMYSRFIERANLKMEIIDTSPTELGGYKEVIFSVSGKNAYRALKFESGTHRVQRI 188 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +S R HTS S++ V P +S + I + D R+D +R+SG GGQ VNTTDSAVRIT Sbjct: 189 PATESGGRIHTSASTVAVMPEAMESDVV-IKDEDIRVDIFRSSGPGGQSVNTTDSAVRIT 247 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H+PTG+VVQCQ E+SQHKNKA+A +LRA++YE E +R A + + +IG G Sbjct: 248 HLPTGLVVQCQDEKSQHKNKAKALKVLRARIYEKEEAER--KAKEAKERREQIGSGDRSE 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +DG++ + A ++ Sbjct: 306 RIRTYNF-PQNRVTDHRINLTLYKLDRFMDGEITEITDALFKKEQ 349 >gi|306827355|ref|ZP_07460642.1| peptide chain release factor RF1 [Streptococcus pyogenes ATCC 10782] gi|304430502|gb|EFM33524.1| peptide chain release factor RF1 [Streptococcus pyogenes ATCC 10782] Length = 359 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 95/348 (27%), Positives = 161/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L RE + ++ +E + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQTISDAEEM 66 Query: 76 ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + L+E + + + E + L D + LE+ AGG E+ Sbjct: 67 IKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+ HIPTG+ V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ +G G Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y V D R + +L G +D+ + A + + Sbjct: 304 RSERIRTYNFS-QNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQ 350 >gi|315657282|ref|ZP_07910164.1| peptide chain release factor RF1 [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315491754|gb|EFU81363.1| peptide chain release factor RF1 [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 367 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 107/347 (30%), Positives = 167/347 (48%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++ L + DP L N A+ + R L + ++ D E+ Sbjct: 11 VEALLEEYHQLEVQMSDPDLHSNQAHARKVGRRYAELSRVNTVVQSWLQARDDLEAGREM 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D E + D+ D +E+ AG GG ES +A Sbjct: 71 --AGEDPDFAAEIPGLEAAFEQSNADLIEALTPRDPDDARDVIMEIKAGEGGEESALFAG 128 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVH 188 L+RMY +AEK + + L + + + G+K A++ + LK E GVH Sbjct: 129 DLMRMYQHYAEKMGWTVQVLGLTESDLGGVKDASIAFKAKGNPSPEEGVWAHLKYEGGVH 188 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS + + V P +++ +IEI +D RID YR+SG GGQ VNTTDS Sbjct: 189 RVQRVPVTESQGRIHTSAAGVLVMPEAEETGDIEIDPNDLRIDVYRSSGPGGQSVNTTDS 248 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307 AVRITH+PTG+VV Q E+SQ +NK +LR++L +LE +KRE A +S+ + Sbjct: 249 AVRITHLPTGIVVSMQNEKSQLQNKEAGMRVLRSRLMQLEAEKREAEAAEARASQVRTVD 308 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RT + + VL+GDL +++ + Sbjct: 309 RSERIRTYNF-PENRIADHRTGYKAYNLDQVLNGDLAPVIQSAIDAD 354 >gi|168702592|ref|ZP_02734869.1| peptide chain release factor 2 [Gemmata obscuriglobus UQM 2246] Length = 342 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 131/333 (39%), Positives = 193/333 (57%), Gaps = 5/333 (1%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 L K + W N +AK ++ + + + + +E+ D + EL E+D + Sbjct: 3 DQLEAKQAEGDFWNNPEKAKSVIGQLKVCNALLKPYEELTAAANDIKAMAEL--AEEDAA 60 Query: 84 ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 E LQ+ + + E + + ++ G+ DS A + + GAGGT++ D+A ML R Y R Sbjct: 61 FESELEPALQKAETQYEAFELQIMMGGKHDSRSAIVTIKPGAGGTDACDFAEMLFRAYGR 120 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 WA++ F E +I +EAG+ S + I GP AYG+++ E GVHRLVRISP+ R Sbjct: 121 WAQRHGFSVEDEDIEPNQEAGVASVSFKIVGPYAYGYMQSEIGVHRLVRISPFGGGDTRQ 180 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TSF++I V P + D IEI I ++D + T+ G GGQHVN T S VR+ H +G+ +C Sbjct: 181 TSFAAIDVLPELPDDIEIVIKDTDYEVQTFSTGGPGGQHVNKTQSGVRLIHK-SGIRAEC 239 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323 + RSQHKNKA+A ML+ +L +E QKR A +K EI +G QIRSYVLQPY +V Sbjct: 240 RMGRSQHKNKAEALKMLQTRLEAVEEQKRMGDAVKSYDAKGEIAFGSQIRSYVLQPYTLV 299 Query: 324 KDLR--TNIEKTSPSDVLDGDLDDFMKATLAIK 354 +D R +++ + +DVLDG+ D FM A L K Sbjct: 300 RDERDGIDVKTPAVNDVLDGNFDQFMHAYLRHK 332 >gi|73748899|ref|YP_308138.1| peptide chain release factor 1 [Dehalococcoides sp. CBDB1] gi|147669660|ref|YP_001214478.1| peptide chain release factor 1 [Dehalococcoides sp. BAV1] gi|289432895|ref|YP_003462768.1| peptide chain release factor 1 [Dehalococcoides sp. GT] gi|119361532|sp|Q3ZYA9|RF1_DEHSC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189039969|sp|A5FQC5|RF1_DEHSB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|73660615|emb|CAI83222.1| peptide chain release factor 1 [Dehalococcoides sp. CBDB1] gi|146270608|gb|ABQ17600.1| bacterial peptide chain release factor 1 (bRF-1) [Dehalococcoides sp. BAV1] gi|288946615|gb|ADC74312.1| peptide chain release factor 1 [Dehalococcoides sp. GT] Length = 355 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 98/345 (28%), Positives = 172/345 (49%), Gaps = 7/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +N +R + + P + + + L +ER L + + + + + L Sbjct: 5 LENCEKRFIEIEEEISKPEVINDARLVRTLAQERADLQDKVEMYRRYKTMAKELEEAKNL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + ++ ++ E FE L D +E+ AG GG E+ Sbjct: 65 LESEKDEDMRGMVRGEIENLEKSLTDLYEQMTFELLPKDPNDDKSIIMEIRAGTGGDEAG 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A+ L +MY R+A + +KTE ++I+ IK + G A+ LK E+GVHR+ Sbjct: 125 LFASDLYKMYIRYALLKNWKTEVIDINGNVAGIIKEVVFEVNGKGAFSRLKYERGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +++ R HTS +++ V P + ++I+I+ + R+D + +SGAGGQ+V +A+R Sbjct: 185 RVPQTEASGRIHTSTATVAVLP-QVEEVDIDINMDEVRVDIFHSSGAGGQNVQKVATAIR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA-NIGESSKTEIGWGR 310 +TH+PTG+VV CQ ERSQ KNK +A+ +LRA+L ELE K +E + + Sbjct: 244 LTHMPTGLVVCCQDERSQLKNKNKAFAVLRARLMELEQSKVDEERTESRRAQVGQADRSE 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + + +L+G LD+ + ++ Sbjct: 304 KIRTYNF-PQDRLTDHRIGLTAHNLPHILEGYLDEIIDTLATHEQ 347 >gi|330995510|ref|ZP_08319414.1| peptide chain release factor 1 [Paraprevotella xylaniphila YIT 11841] gi|329575422|gb|EGG56964.1| peptide chain release factor 1 [Paraprevotella xylaniphila YIT 11841] Length = 370 Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats. Identities = 94/364 (25%), Positives = 162/364 (44%), Gaps = 20/364 (5%) Query: 7 LNCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 + + D + V R + T DP++ + L +E + L + + KE D Sbjct: 1 MAENNSILDKLEGLVSRYEEVGTLITDPNVISDQKRYVKLTKEYKDLGDIMKARKEYMDS 60 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEV 121 L E+ EDD + + + + + + + + + D + +E+ Sbjct: 61 LQTLQDAKEMLAIEDDPEMKEMAREEMAAAEKHIPEMEERIKLLLVPADPEDDKNVIMEI 120 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 G GG E+ +A L RMYT++ E + +K +G G K + G YG L Sbjct: 121 RGGTGGDEAALFAGDLFRMYTKYCEMKGWKIAISSFTEGAAGGFKEIIFSVTGEKVYGTL 180 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHR+ R+ ++ R HTS +++ V P + I+E + + DT+R+SGAGGQ Sbjct: 181 KYESGVHRVQRVPATETQGRVHTSAATVAVLPEAQEFDVE-INEGEIKWDTFRSSGAGGQ 239 Query: 242 HVNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 +VN +S VR ++ ++++C + R Q KNK +A LR +Y+ E QK Sbjct: 240 NVNKVESGVRARYLWKNPNTGETEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY- 298 Query: 294 EIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 I +I KT + G + IR+Y P + D R + +DG++ D + Sbjct: 299 -IDDIANRRKTMVSTGDRSAKIRTYNY-PQSRITDHRIGYNMQNLPSFMDGNIQDCIDQL 356 Query: 351 LAIK 354 + Sbjct: 357 TVAE 360 >gi|257064123|ref|YP_003143795.1| bacterial peptide chain release factor 1 (bRF-1) [Slackia heliotrinireducens DSM 20476] gi|256791776|gb|ACV22446.1| bacterial peptide chain release factor 1 (bRF-1) [Slackia heliotrinireducens DSM 20476] Length = 352 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 117/346 (33%), Positives = 170/346 (49%), Gaps = 12/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 V L K DP + + E L +E + +E D + Sbjct: 5 LSKIVAGYKELEQKLGDPAVLADQKEYTRLSKEYSKQGPLVEKAREYLQACEDIDDAKSM 64 Query: 76 ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D QET + E +F + AD D +E+ AGG E+ +A Sbjct: 65 LGDADMREFAQETIAECEAKLPGLEEDIKFMLIPEDPADEKDIIVEIRGAAGGDEAAIFA 124 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L +MY R+ E +++K E +++ E G K +KG + Y +K E GVHR+ R+ Sbjct: 125 GDLYKMYARFCESQRWKIETMDVSASEAGGYKEIQFKVKGDHVYSLMKFESGVHRVQRVP 184 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P D I++EI+E+D RID YRA G GGQ VNTTDSAVRITH Sbjct: 185 KTESQGRIHTSTATVAVLP-EADEIDVEINENDLRIDVYRAGGPGGQCVNTTDSAVRITH 243 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +P+G+VVQ Q ++SQ +NK A +LR++LYE L +++ A G +IG G + Sbjct: 244 LPSGLVVQSQDQKSQLQNKIAAMAVLRSRLYEKMLAEQQ--AAEGAERLAQIGSGDRAEK 301 Query: 312 IRSYVLQPYQMVKDLRTNIE-KTSPSDVLDGD-LDDFMKATLAIKK 355 IR+Y P V D R + VL GD L D + A A + Sbjct: 302 IRTYN-APQDRVTDHRIGYNGTYN--GVLLGDGLGDLITALQAADR 344 >gi|184200614|ref|YP_001854821.1| peptide chain release factor 1 [Kocuria rhizophila DC2201] gi|238689221|sp|B2GLX4|RF1_KOCRD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|183580844|dbj|BAG29315.1| peptide chain release factor 1 [Kocuria rhizophila DC2201] Length = 369 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 109/338 (32%), Positives = 168/338 (49%), Gaps = 10/338 (2%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + + L + DP + + A+ L R L+ + + ++ D EL Sbjct: 8 LLDEHAQLQRELADPAVHADAGRARKLGRRYSELNGIVEAHRRVERLSEDLEAARELGSM 67 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 + + + + + + E ++ + D + LEV AG GG ES +A LL Sbjct: 68 DPELAAEVKPLEEELAVAREALRRKL--VPRDPDDGRNVILEVKAGEGGDESALFAGDLL 125 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI------KGPNAYGWLKGEQGVHRLVR 192 RMY R+AE+ KTE L E G K L + A+ K E GVHR+ R Sbjct: 126 RMYMRFAEQSGLKTEILSSTPTELGGYKDVQLAVKGSSSDPSEGAWARFKYEGGVHRVQR 185 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS + + V+P VD+ EI+IS++D +ID YR+SG GGQ VNTTDSAVRI Sbjct: 186 VPVTESQGRVHTSAAGVLVFPEVDEPDEIDISQNDLKIDVYRSSGPGGQSVNTTDSAVRI 245 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311 TH+PTG+VV Q E+SQ +N+ A +LRA+L + ++ + S+ + + Sbjct: 246 THVPTGIVVSMQNEKSQLQNREAAMRVLRARLLAHQQEQIDAENAAARKSQVRTVDRSER 305 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 IR+Y P + D RT + + VLDG L+ + + Sbjct: 306 IRTYNF-PENRIADHRTGYKAYNLDHVLDGALEPVIAS 342 >gi|189182919|ref|YP_001936704.1| peptide chain release factor 1 [Orientia tsutsugamushi str. Ikeda] gi|238692229|sp|B3CQD1|RF1_ORITI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189179690|dbj|BAG39470.1| peptide chain release factor RF-1 [Orientia tsutsugamushi str. Ikeda] Length = 359 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 124/345 (35%), Positives = 182/345 (52%), Gaps = 14/345 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +Q+ L L + E ++ +E +L I + + L ++ Sbjct: 7 LNKILQKYQDLEADLNGGKL--DNKELALISKEYSNLKPIIEKLNRYLKAHENIKYLQQV 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 E D + L + + E D +A +EV AG GG E+ Sbjct: 65 IDTEQDLELKSIAEVELYDTLNYLPKLEEEVKISLLPKESDDHKNAIIEVRAGTGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L +MY R+AE++K+K E L I D E G K A+ LI G + LK E GVHR+ Sbjct: 125 LFAASLFQMYNRYAERKKWKFELLSISDTEIGGYKEASALISGNGVFANLKFESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +SN R HTS +++ V P + ++++I D +IDTYRASGAGGQHVNTTDSAVR Sbjct: 185 RIPKTESNGRIHTSAATVVVLP-EAEEVDVKIDAKDLKIDTYRASGAGGQHVNTTDSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIPTGVVV Q E+SQHKNKA+A +L A+LY+LE QK ++ + K ++G G Sbjct: 244 ITHIPTGVVVSQQDEKSQHKNKAKAMKILYARLYDLEKQKSQQEQAMS--RKVQVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352 +IR+Y P V D R N+ +++ +G LD+ + ++ Sbjct: 302 SERIRTYNY-PQGRVTDHRINLTLYKIEEIIQEGKLDEIINNLIS 345 >gi|33241132|ref|NP_876074.1| peptide chain release factor 1 [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|81663962|sp|Q7V9Z0|RF1_PROMA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|33238662|gb|AAQ00727.1| Protein chain release factor A [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 365 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 105/348 (30%), Positives = 170/348 (48%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72 + A + L + DP + + + + + RER L+ + KE+Q + L Sbjct: 10 LETASATFNNLELQLADPDVASDPKKLETIARERARLEPLVLDYKELQAIDLEYKEAKEL 69 Query: 73 LELALEEDDCSI--LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L + + + +E + K V L D LE+ AGAGG E+ Sbjct: 70 LRQSKSDKEMEALAQEELIRLEELEKDLVNRLTLALLPKDPRDERSVMLEIRAGAGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY R+ K + +A+ + + G + + +KG + LK E GVHR+ Sbjct: 130 CIWAGDLARMYERYGLKVGWVVKAMSATEADLGGFRELIISVKGKAVFSQLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P D +E+++ +D I T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADPVEVKLEPTDLEISTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ V C QERSQ +N+ +A +LRAKL E E++ E A + ++G G Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERALEILRAKLLEREIE--EANAKERSARLAQVGTGD 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + D R + VL+G+LDD + A +A ++ Sbjct: 307 RSEKIRTYNYKD-NRTTDHRLGVNFP-LETVLEGELDDLIGACIAEEQ 352 >gi|300871300|ref|YP_003786173.1| peptide chain release factor 1 [Brachyspira pilosicoli 95/1000] gi|300689001|gb|ADK31672.1| peptide chain release factor 1 [Brachyspira pilosicoli 95/1000] Length = 358 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 113/348 (32%), Positives = 182/348 (52%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + + K D ++ ++ + LM+++ +++ ++ K+++ L + E+ Sbjct: 7 LSSVENTYNDIVDKLNDANI-KDNRVIQDLMKKKSEIEDIVNEYKKLKTVLKEIEDANEM 65 Query: 76 ALEEDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 D L+ + Q+ + + + L + D + +E+ G GG ES Sbjct: 66 LNHSDTDKELKNMALLEIEELNQKKENIINDLRLLLLPKDKNDGKNIIVEIRVGTGGDES 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 + L RMY+R+ E+ FK E ++I E G K + G NAY LK E G HR+ Sbjct: 126 ALFVGDLFRMYSRFIERANFKMEIIDISPTELGGYKEVIFSVSGKNAYRTLKFESGTHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 RI +S R HTS S++ + P ++S I I + D R+D +R+SG GGQ VNTTDSAV Sbjct: 186 QRIPATESGGRIHTSASTVAIMPEAEESDVI-IKDEDIRVDIFRSSGPGGQSVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+VVQCQ E+SQHKNKA+A +LRA++YE E +R A + + +IG G Sbjct: 245 RITHLPTGLVVQCQDEKSQHKNKAKALKVLRARIYEKEEAER--KAKEDKERRDKIGSGD 302 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +DG++ + A ++ Sbjct: 303 RSERIRTYNF-PQNRVTDHRINVTLYKLDRFMDGEITEITDALFKKEQ 349 >gi|218672481|ref|ZP_03522150.1| peptide chain release factor 1 [Rhizobium etli GR56] Length = 352 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 112/344 (32%), Positives = 179/344 (52%), Gaps = 18/344 (5%) Query: 18 NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 +R + + P L E L ++ I+ + + + L L Sbjct: 11 ELERRFDEIEARMSAGPA----ADVYVKLASEYSELQPVVTKIRAYEKAVAELADLDTLL 66 Query: 77 LEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ++ +++ ++ +RI+ + Q L AD A LE+ AG GG+E+ Sbjct: 67 EDKSVDREMRDLAELELPEVKERIEALEQEMQILLLPKDAADEKSAILEIRAGTGGSEAA 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R+A ++ +K E L +GE G K I G + LK E GVHR+ Sbjct: 127 LFAGDLFRMYERFAAEKSWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P + I+IEI D RIDT R+SGAGGQHVNTTDSAVR Sbjct: 187 RVPETEAGGRIHTSAATVAVLP-EAEEIDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+P+G+VV E+SQH+N+A+A +LR++LY+ E Q+ + K+++G G Sbjct: 246 ITHLPSGIVVTSS-EKSQHQNRAKAMQVLRSRLYDAERQR--ADSERSADRKSQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ +++G++++ + A +A Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVDALMA 345 >gi|329116672|ref|ZP_08245389.1| peptide chain release factor 1 [Streptococcus parauberis NCFD 2020] gi|326907077|gb|EGE53991.1| peptide chain release factor 1 [Streptococcus parauberis NCFD 2020] Length = 359 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 93/348 (26%), Positives = 161/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +D + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEAGTRETVDVYRKYKDVIQAIADAEEM 66 Query: 76 ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + S ++E + + + E + L D + LE+ AGG E+ Sbjct: 67 IKDSGGDSDIEEMAREELKESKAAKETYEEQLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKFAESQNWRFEVMEATYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ + P + ++ +I D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLIMP-EVEEVDYQIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+ HIPT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RMVHIPTNIKVEMQEERTQQKNRDKAIKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G +D+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEIVDALVLYDQ 350 >gi|300361282|ref|ZP_07057459.1| peptide chain release factor RF2 [Lactobacillus gasseri JV-V03] gi|300353901|gb|EFJ69772.1| peptide chain release factor RF2 [Lactobacillus gasseri JV-V03] Length = 270 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 137/255 (53%), Positives = 181/255 (70%) Query: 99 VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 + LLS + D ++A +E+H GAGGTE+ DWA+MLLRMY R+A K E + Sbjct: 8 FHDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAANHDLKFEIEDYE 67 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 GEEAG+KS ++ I+G NA+G LK E GVHRLVRISP+DS RRHTSF+S+ V P +D S Sbjct: 68 PGEEAGVKSVSIRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASVEVIPEIDQS 127 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 IE++I+ D RID YR+SGAGGQH+N T SAVRITH+PTG+V Q +RSQ +N+ A N Sbjct: 128 IEVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQLQNRETAMN 187 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 MLRAKL++LE +K+++ + ++ EIG+G QIRSYV PY MVKD RTN E + + V Sbjct: 188 MLRAKLFQLEEEKKKKQTEELKGNQKEIGFGSQIRSYVFHPYNMVKDHRTNFETSDVNGV 247 Query: 339 LDGDLDDFMKATLAI 353 +DG LD+F+ A L Sbjct: 248 MDGKLDNFIYAYLQW 262 >gi|296533064|ref|ZP_06895708.1| peptide chain release factor RF1 [Roseomonas cervicalis ATCC 49957] gi|296266608|gb|EFH12589.1| peptide chain release factor RF1 [Roseomonas cervicalis ATCC 49957] Length = 351 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 114/345 (33%), Positives = 173/345 (50%), Gaps = 16/345 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72 D + R L E + L +E L+ ++ ++ + + + L Sbjct: 7 LDRLLYRADELRALLETAE----GAQVGALAKELSELEPLVAQVEALRAAERARDEAEAL 62 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L + + + L AD+ A LE+ AGG E+ Sbjct: 63 LADPEMRELAEAEYYAQRDAVPVLERELRL--MLLPKDAADAGSAILEIRPAAGGDEAGL 120 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L Y ++A R ++ L+ + E GIK A ++G + LK E GVHR+ R Sbjct: 121 FAAELFAAYQKYAAARGWRFGVLDYDESELGGIKGAVAEVEGQGVFARLKFESGVHRVQR 180 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P +D ++++I+ESD RIDTYRASGAGGQHVN TDSAVRI Sbjct: 181 VPATETQGRIHTSTVTVAVLPQAED-VDVQINESDLRIDTYRASGAGGQHVNKTDSAVRI 239 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG VV Q+ERSQHKN+A+A +LRA+LY E Q+ + +A+ + ++G G Sbjct: 240 THIPTGTVVAMQEERSQHKNRAKAMKVLRARLY--EAQRSQAVASRSADRRAQVGTGDRS 297 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P V D R + V+ G++DD + A +A Sbjct: 298 ERIRTYNF-PQGRVTDHRIGLTLHKIDRVMQGEMDDIIDALIAED 341 >gi|224283865|ref|ZP_03647187.1| peptide chain release factor 1 [Bifidobacterium bifidum NCIMB 41171] gi|310287872|ref|YP_003939130.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bifidobacterium bifidum S17] gi|311064752|ref|YP_003971477.1| peptide chain release factor 1 (RF-1) PrfA [Bifidobacterium bifidum PRL2010] gi|313141020|ref|ZP_07803213.1| peptide chain release factor 1 [Bifidobacterium bifidum NCIMB 41171] gi|309251808|gb|ADO53556.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bifidobacterium bifidum S17] gi|310867071|gb|ADP36440.1| PrfA Bacterial Peptide Chain Release Factor 1 (RF-1) [Bifidobacterium bifidum PRL2010] gi|313133530|gb|EFR51147.1| peptide chain release factor 1 [Bifidobacterium bifidum NCIMB 41171] Length = 362 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 105/349 (30%), Positives = 165/349 (47%), Gaps = 16/349 (4%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 A++ + + P + N + + L R L +S + D E+A Sbjct: 10 QTALEEYQSIEQQMASPEVVTNPDKMRKLGRRHAELGAIVSAYQSYTAVRDDLEAAREMA 69 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 E+ + + + + E + D+ D +E+ AG GG E+ +A Sbjct: 70 GEDPEFADEAKRLEAELPAAEEKLRNAL--IPRDPDDARDVIMEIKAGTGGEEAALFAGD 127 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHR 189 LLRMY R+AEKR + + E G+K + I + LK E GVHR Sbjct: 128 LLRMYLRYAEKRGWAVTVQSENTTELGGVKDVQIAIRAKGTPAPEDGVWASLKYEGGVHR 187 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 + RI +S R TS + + V+P +D EIEI D +ID + +SG GGQ VNTT S Sbjct: 188 VQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYS 247 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI-- 306 AVR+THIPTG+VV Q E+SQ +N+A A +L+++L L ++ +E A + +++ Sbjct: 248 AVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRS 305 Query: 307 -GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RTN + + VLDGDL + + + Sbjct: 306 LDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 353 >gi|56751121|ref|YP_171822.1| peptide chain release factor 2 [Synechococcus elongatus PCC 6301] gi|56686080|dbj|BAD79302.1| peptide chain release factor RF-2 [Synechococcus elongatus PCC 6301] Length = 304 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 141/294 (47%), Positives = 199/294 (67%) Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 + Q D +LEL E D ++ +E N+QR++ E++ + + LLSG D+ A L Sbjct: 2 DWQQLDADITAILELLAIEPDPALFEEAETNVQRLQRELDQWELQQLLSGPYDAEGAILS 61 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 ++AGAGGT++QDWA MLLRMYTRWAE + +K E+ +GEEAGIKS TL I+G AYG+ Sbjct: 62 INAGAGGTDAQDWAEMLLRMYTRWAEDQGYKVRITELSEGEEAGIKSVTLEIEGKYAYGY 121 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E+G HRLVRISP+++N +R TSF+ + V PV+D I++EI E D I T RA G GG Sbjct: 122 LKAEKGTHRLVRISPFNANDKRQTSFAGVEVMPVLDTDIDLEIPEKDLEITTSRAGGKGG 181 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q+VN ++AVRI H+PTG+ V+C +ERSQ +NK +A +LRAKL + +++ + Sbjct: 182 QNVNKVETAVRIVHLPTGLAVRCTEERSQLQNKEKALVILRAKLLVVLQEQKAKEVAEIR 241 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 E WG QIR+YV PYQ+VKDLRT +E + +DV++GDL+ F++A L Sbjct: 242 GDMVEAAWGNQIRNYVFHPYQLVKDLRTGVETKAIADVMNGDLNPFIQAYLRQD 295 >gi|42520141|ref|NP_966056.1| peptide chain release factor 1 [Wolbachia endosymbiont of Drosophila melanogaster] gi|58698355|ref|ZP_00373269.1| peptide chain release factor 1 [Wolbachia endosymbiont of Drosophila ananassae] gi|81652805|sp|Q73IC2|RF1_WOLPM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|42409878|gb|AAS13990.1| peptide chain release factor 1 [Wolbachia endosymbiont of Drosophila melanogaster] gi|58535109|gb|EAL59194.1| peptide chain release factor 1 [Wolbachia endosymbiont of Drosophila ananassae] Length = 359 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 123/348 (35%), Positives = 189/348 (54%), Gaps = 15/348 (4%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + + ++ + + E+P E L +E L I I E + L E Sbjct: 6 NLQDLKKKFNDIERNLENPTNLS-QKEFITLSKEYSELRPIIKIIDEYNTLKEEISDLEE 64 Query: 75 LALEEDDCSILQETSDNLQRIK------LEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 + +E+ ++E + K + L E DS +A LE+ AG GG Sbjct: 65 IMKDENSEGDIKELAKEEFFEKHKVLLPKIKAKLKLALLPKDEDDSRNAILEIRAGTGGE 124 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A ML RMY ++AE+R +K E + I + G K A+ LI G + LK E GVH Sbjct: 125 EAALFAAMLFRMYQKYAERRNWKFEPISISNTGIGGYKEASALINGTEVFARLKFESGVH 184 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S+ R HTS +++ + P + ++ +I E D RID YR+SG GGQ VNTTDS Sbjct: 185 RVQRVPETESSGRLHTSAATVAILP-EVEEVDFKIEEKDLRIDVYRSSGPGGQSVNTTDS 243 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+TH+PTG+VV Q E+SQHKNKA+A +LRA+LYE+E QK+E + K++IG Sbjct: 244 AVRVTHLPTGIVVIQQDEKSQHKNKAKALKVLRARLYEIERQKKEMERSTM--RKSQIGS 301 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352 G +IR+Y P + D R N+ ++ +G+LD+F++A ++ Sbjct: 302 GDRSERIRTYNF-PQSRITDHRINLTSHRLEQIIKEGELDEFIEALIS 348 >gi|225870517|ref|YP_002746464.1| peptide chain release factor 1 [Streptococcus equi subsp. equi 4047] gi|254790898|sp|C0MC15|RF1_STRE4 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|225699921|emb|CAW93851.1| peptide chain release factor 1 [Streptococcus equi subsp. equi 4047] Length = 360 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 95/348 (27%), Positives = 160/348 (45%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E ++ ++ + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPEVVSDTKRFMALSKEEASTRETVAAYRQYKAIIQSIDDAEEM 66 Query: 76 ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E ++E + + + + + L D + LE+ AGG E+ Sbjct: 67 IKEAGGDPDIEEMAKEELKEAKSAKEAYEDKLKLLLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLAMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D RID Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEIVDALVLYDQ 350 >gi|213969083|ref|ZP_03397222.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudomonas syringae pv. tomato T1] gi|213926081|gb|EEB59637.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudomonas syringae pv. tomato T1] Length = 280 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 160/279 (57%), Positives = 211/279 (75%), Gaps = 1/279 (0%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 ++ EE+D + + + + ++R++ +E +F + SGE D N+AYL++ AG+GGTE+QDWA Sbjct: 1 MSAEEEDQAAVDDVAAEVERLRASLEKLEFRRMFSGEMDPNNAYLDIQAGSGGTEAQDWA 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 N+LLRMY RWA+KR F +E+ GE AGIK AT+ IKG A+GWL+ E GVHRLVR S Sbjct: 61 NILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+DS +RRHTSFS+++V P +DD+IEI+I+ SD RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 121 PFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRSSGAGGQHVNTTDSAVRITH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 +PT VV CQ ERSQH NK A MLRA+LYE E+QKR + E +K++IGWG QIRS Sbjct: 181 VPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTKSDIGWGHQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 YVL +KDLRTNIE++ VLDGD+D+++ A+L Sbjct: 241 YVLD-ASRIKDLRTNIERSDCDKVLDGDIDEYLIASLKQ 278 >gi|91215788|ref|ZP_01252758.1| putative peptide chain release factor [Psychroflexus torquis ATCC 700755] gi|91186254|gb|EAS72627.1| putative peptide chain release factor [Psychroflexus torquis ATCC 700755] Length = 316 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 133/307 (43%), Positives = 199/307 (64%), Gaps = 2/307 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ + + + D +L E E D + +E +F+ Sbjct: 1 MQAINDEKQWVKSFDFAKQLVEDLNVLFEFFEEGDVSEDEIKEKYAEA--LELIEDLEFK 58 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++LS E+D A L++ AGAGGTES DWA ML+RMY WA++R FK L G+ AGI Sbjct: 59 NMLSEESDPLTAILQITAGAGGTESCDWAEMLMRMYIMWADRRNFKIRELNHQGGDVAGI 118 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ TL I+G A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDD+IEI+I+ Sbjct: 119 KTVTLEIEGEYAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIDINP 178 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 S+ + + R+ GAGGQ+VN ++ +TH P+G+V+ + RSQ +N+ +A ML+++LY Sbjct: 179 SEIKWEFARSGGAGGQNVNKVETKAILTHYPSGIVIHNSETRSQLENRQKAMQMLKSQLY 238 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 E+EL+K++ + ES K I WG QIR+YV+ PY++VKD+RT E + D+++G +D Sbjct: 239 EIELKKQQAARSEIESEKKSIEWGSQIRNYVMHPYKLVKDVRTGFESGNVDDIMNGHIDS 298 Query: 346 FMKATLA 352 F+K+ L Sbjct: 299 FLKSYLM 305 >gi|331000229|ref|ZP_08323913.1| peptide chain release factor 2 [Parasutterella excrementihominis YIT 11859] gi|329572395|gb|EGG54048.1| peptide chain release factor 2 [Parasutterella excrementihominis YIT 11859] Length = 280 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 150/279 (53%), Positives = 205/279 (73%), Gaps = 1/279 (0%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +A EEDD + L+ ++ +K EVE+ +F+ + + E D + +LE+ AGAGGTE+QDWA Sbjct: 1 MAKEEDDDASLEAVEADINNLKKEVEHLEFQRMFNQEHDEANCFLEIQAGAGGTEAQDWA 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 +ML RMY ++AE++ FK E +E +G+ AGIK T+ I G AYGWL+ E G+HRLVR S Sbjct: 61 SMLERMYIKFAERQSFKPEIVEETEGDVAGIKGCTIKITGDYAYGWLRTETGIHRLVRKS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+DSN+RRHTSF+S++V P VDDS EIE++ +D RIDT+RASGAGGQH+ TDSAVRITH Sbjct: 121 PFDSNARRHTSFASVFVVPEVDDSFEIEVNPADLRIDTFRASGAGGQHIQKTDSAVRITH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 IPTG+V Q RSQH+NK +A +L+++LYE EL+KR+ E +K++I WG QIRS Sbjct: 181 IPTGIVAVSQTSRSQHQNKEEAMTILKSRLYEAELRKRQATQQALEDNKSDISWGHQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 YVL VKDLRTN+E + + VLDG L+ F++A+L Sbjct: 241 YVLD-QSRVKDLRTNVETGNTTAVLDGALESFIEASLKQ 278 >gi|55820816|ref|YP_139258.1| peptide chain release factor 1 [Streptococcus thermophilus LMG 18311] gi|55822719|ref|YP_141160.1| peptide chain release factor 1 [Streptococcus thermophilus CNRZ1066] gi|116627620|ref|YP_820239.1| peptide chain release factor 1 [Streptococcus thermophilus LMD-9] gi|81559540|sp|Q5M0B7|RF1_STRT1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|81560720|sp|Q5M4W4|RF1_STRT2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|122267782|sp|Q03L79|RF1_STRTD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|55736801|gb|AAV60443.1| peptide chain release factor 1 [Streptococcus thermophilus LMG 18311] gi|55738704|gb|AAV62345.1| peptide chain release factor 1 [Streptococcus thermophilus CNRZ1066] gi|116100897|gb|ABJ66043.1| bacterial peptide chain release factor 1 (bRF-1) [Streptococcus thermophilus LMD-9] gi|312278142|gb|ADQ62799.1| Peptide chain release factor 1 [Streptococcus thermophilus ND03] Length = 359 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 98/348 (28%), Positives = 163/348 (46%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L RE + + +E + + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPEVVSDTKRFMELSREEANTRETVIAYREYKQVIQNISDAEEM 66 Query: 76 ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + L+E + + + E + L D + LE+ AGG E+ Sbjct: 67 IKEASGDADLEEMAKEELKKSKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLAMYQKYAETQGWRFEVMEASYNGVGGIKEVVAMVSGESVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P V++ EI D R+D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEVEEME-YEIDPKDLRVDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+ HIPTG+ V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ +G G Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKALKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G +D+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKMDEVIDALVLYDQ 350 >gi|118619169|ref|YP_907501.1| peptide chain release factor 1 [Mycobacterium ulcerans Agy99] gi|166223575|sp|A0PUL1|RF1_MYCUA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|118571279|gb|ABL06030.1| peptide chain release factor 1 PrfA [Mycobacterium ulcerans Agy99] Length = 357 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 109/332 (32%), Positives = 158/332 (47%), Gaps = 9/332 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + + L DP L EA+ R L ++ +++ D EL Sbjct: 8 IDVLLAEHADLERALADPELHSRPDEARKAGRRFARLARIVATYRKLVAAREDLETAHEL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A ++ + D++D LEV +G GG ES +A Sbjct: 68 AATDESFVAEAAELEARVAELDSQLTDML--APRDPHDADDIVLEVKSGEGGEESALFAA 125 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-----KGPNAYGWLKGEQGVHRL 190 L RMY R+AE+ + L + G + ATL I + +K E GVHR+ Sbjct: 126 DLARMYIRYAERHGWTVTVLGETTSDLGGYRDATLAIASKGDTADGVWSRMKFEGGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS + + VYP ++ E++I ESD RID YR+SG GGQ VNTTDSAV Sbjct: 186 QRVPVTESQGRVHTSAAGVLVYPEPEEVGEVQIDESDLRIDVYRSSGKGGQGVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG+VV CQ ERSQ +NK +A +L A+L + ++ A+ +S+ + Sbjct: 246 RITHLPTGIVVTCQNERSQLQNKIRAMQVLGARLQAIAEERAMADASADRASQIRTVDRS 305 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 +IR+Y P V D R + + VLDG Sbjct: 306 ERIRTYNF-PENRVTDHRIGYKSHNLDQVLDG 336 >gi|227498082|ref|ZP_03928255.1| peptide chain release factor RF1 [Actinomyces urogenitalis DSM 15434] gi|226832520|gb|EEH64903.1| peptide chain release factor RF1 [Actinomyces urogenitalis DSM 15434] Length = 366 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 113/344 (32%), Positives = 165/344 (47%), Gaps = 11/344 (3%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 ++ + + DP + + + L R L +S + Q D +ELA Sbjct: 15 LLEEYFGIEREMADPAISSDPGAMRRLGRRYAELGRVVSAYRAWQAAQADYDDAVELAEG 74 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 + D + E + + D+ D +EV AG GG ES +A+ L Sbjct: 75 DPDFAAEVPGLQAAAETATEHLREVL--VPRDPDDARDVIIEVKAGEGGEESALFASDLA 132 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLV 191 RMYTR+AE+ + E L+ D + G K L + + LK E GVHR+ Sbjct: 133 RMYTRYAERMGWAVEVLDATDSDLGGYKDVRLAVKARSAVEPQDGVWAHLKYEGGVHRVQ 192 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS + + V P VDD E+EI +D RID +R+SG GGQ VNTTDSAVR Sbjct: 193 RVPVTESQGRIHTSAAGVLVMPEVDDPGELEIDPNDLRIDVFRSSGPGGQSVNTTDSAVR 252 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGR 310 ITH+PTG+VV Q E+SQ +NK A +LRA+L + S+ + Sbjct: 253 ITHLPTGIVVSMQNEKSQLQNKEAALRVLRARLLAERAAQAAAEEAEARRSQVRTVDRSE 312 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RT + + S VLDGDL + + +A+ Sbjct: 313 RIRTYNF-PENRITDHRTGYKAYNLSTVLDGDLGPVIDSAIAMD 355 >gi|240169515|ref|ZP_04748174.1| peptide chain release factor 1 [Mycobacterium kansasii ATCC 12478] Length = 357 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 111/332 (33%), Positives = 160/332 (48%), Gaps = 9/332 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + + L DP L N A+ R L ++ +++ D EL Sbjct: 8 IDVLLAEHADLEHALSDPELHSNPGAARKAGRRFALLAPIVATHRKLVAAREDLETAREL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A +D + D++D LEV +G GG ES +A Sbjct: 68 AASDDSFVAEAAELEARVAELDAQLTDML--APRDPHDADDIVLEVKSGEGGEESALFAA 125 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-----KGPNAYGWLKGEQGVHRL 190 L RMY R+AE+R + L+ + G K ATL I + +K E GVHR+ Sbjct: 126 DLARMYIRYAERRGWTVTVLDETTSDLGGYKDATLAIASKGDSVDGVWSRMKFEGGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS + + VYP ++ E++I ESD RID YR+SG GGQ VNTTDSAV Sbjct: 186 QRVPVTESQGRVHTSAAGVLVYPEPEEVGEVQIDESDLRIDVYRSSGKGGQGVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG+VV CQ ERSQ +NK +A +L A+L + ++ A+ +S+ + Sbjct: 246 RITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQSMAEEQALADASADRASQIRTVDRS 305 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 +IR+Y P + D R + + VLDG Sbjct: 306 ERIRTYNF-PENRITDHRIGYKAYNLDQVLDG 336 >gi|81299215|ref|YP_399423.1| peptide chain release factor 2 [Synechococcus elongatus PCC 7942] gi|81168096|gb|ABB56436.1| bacterial peptide chain release factor 2 (bRF-2) [Synechococcus elongatus PCC 7942] Length = 304 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 140/294 (47%), Positives = 199/294 (67%) Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 + Q D +LEL E D ++ +E N+QR++ E++ + + LLSG D+ A L Sbjct: 2 DWQQLDADITAILELLAIEPDPALFEEAETNVQRLQRELDQWELQQLLSGPYDAEGAILS 61 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 ++AGAGGT++QDWA MLLRMYTRWAE + +K E+ +GEEAGIKS TL I+G AYG+ Sbjct: 62 INAGAGGTDAQDWAEMLLRMYTRWAEDQGYKVRITELSEGEEAGIKSVTLEIEGKYAYGY 121 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E+G HRLVRISP+++N +R TSF+ + V PV+D I++EI E D I T RA G GG Sbjct: 122 LKAEKGTHRLVRISPFNANDKRQTSFAGVEVMPVLDTDIDLEIPEKDLEITTSRAGGKGG 181 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q+VN ++AVRI H+PTG+ V+C +ERSQ +NK +A +L+AKL + +++ + Sbjct: 182 QNVNKVETAVRIVHLPTGLAVRCTEERSQLQNKEKALVILKAKLLVVLQEQKAKEVAEIR 241 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 E WG QIR+YV PYQ+VKDLRT +E + +DV++GDL+ F++A L Sbjct: 242 GDMVEAAWGNQIRNYVFHPYQLVKDLRTGVETKAIADVMNGDLNPFIQAYLRQD 295 >gi|124024969|ref|YP_001014085.1| peptide chain release factor 2 [Prochlorococcus marinus str. NATL1A] gi|123960037|gb|ABM74820.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. NATL1A] Length = 313 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 139/308 (45%), Positives = 199/308 (64%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MR+ + + + + + D + LEL + D IL E + L+++K E++ + E Sbjct: 1 MRQLDEVKAQLEKLITWRGAIEDANLSLELYELDLDEEILSEAHNGLEKLKQELDRWETE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LLSG D A L ++AGAGGT++QDWA MLLRMYTRWA+ K E+ +GEEAGI Sbjct: 61 RLLSGIYDKEGAVLSINAGAGGTDAQDWAQMLLRMYTRWADNNGMKVIINELSEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KS T+ I+G AYG+L+ E+G HRLVRISP+++N +R TSF+ + V P +D+ +E+EI E Sbjct: 121 KSVTIEIEGVYAYGFLQNEKGTHRLVRISPFNANGKRQTSFAGVEVMPKLDEEVELEIPE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D I T R+ GAGGQ+VN ++AVRI H+PTG+ V+C QERSQ +NK +A +L++KL Sbjct: 181 KDLEITTSRSGGAGGQNVNKVETAVRILHVPTGIAVRCTQERSQLQNKDKAMALLKSKLM 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 + L++R E WG QIR+YV PYQMVKDLRT E T V++G++D Sbjct: 241 VIALEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQMVKDLRTEQETTDVDSVMNGEIDI 300 Query: 346 FMKATLAI 353 F+++ L Sbjct: 301 FIQSLLRQ 308 >gi|261880577|ref|ZP_06007004.1| peptide chain release factor RF1 [Prevotella bergensis DSM 17361] gi|270332696|gb|EFA43482.1| peptide chain release factor RF1 [Prevotella bergensis DSM 17361] Length = 369 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 90/354 (25%), Positives = 152/354 (42%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R + T DP + + L +E + L + + K D L ++ Sbjct: 10 LDGLESRFEEVKTLITDPSVIADQKRYVKLTKEYKDLSDIMDARKRYIDCLNAIKESKDI 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + L + + E D+ + +E+ AGAGG E+ Sbjct: 70 MTNESDADMKEMAREELSINESLQPQLEEEIKMALVPKDPEDAKNVQMEIRAGAGGDEAA 129 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MY ++ + + + + +G G K + G N YG LK E GVHR+ Sbjct: 130 LFAGDLFNMYKKFCDTKGWSVSVTSVSEGSVGGYKEIDFAVSGDNVYGVLKYESGVHRVQ 189 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P D I+E D + DT+R+SGAGGQ+VN +S VR Sbjct: 190 RVPATETQGRMHTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKVESGVR 248 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + + ++++C + R Q KNK +A + L +Y+ E K + +I K Sbjct: 249 LRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTYIYDHERSKY--LNDISSRRK 306 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + + G + IR+Y P + D R L GD+ D + + Sbjct: 307 SLVSTGDRSAKIRTYNF-PQGRITDHRIGYTTHDLQGFLGGDIQDMIDHLTVAE 359 >gi|148284270|ref|YP_001248360.1| peptide chain release factor [Orientia tsutsugamushi str. Boryong] gi|166223581|sp|A5CCS8|RF1_ORITB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|146739709|emb|CAM79522.1| peptide chain release factor [Orientia tsutsugamushi str. Boryong] Length = 359 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 124/345 (35%), Positives = 182/345 (52%), Gaps = 14/345 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +Q+ L L + E ++ +E +L I + + L ++ Sbjct: 7 LNKILQKYQDLEADLNGGKL--DNKELALISKEYSNLKPIIEKLNRYLKAHENIKYLQQV 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 E D + L + + E D +A +EV AG GG E+ Sbjct: 65 IDTEQDLELKSIAEVELYDTLNYLPKLEEEVKISLLPKESDDHKNAIIEVRAGTGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L +MY ++AE++K+K E L I D E G K A+ LI G + LK E GVHR+ Sbjct: 125 LFAASLFQMYNKYAERKKWKFELLSISDTEIGGCKEASALISGNGVFANLKFESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +SN R HTS +++ V P + ++++I D +IDTYRASGAGGQHVNTTDSAVR Sbjct: 185 RIPKTESNGRIHTSAATVVVLP-EAEEVDVKIDAKDLKIDTYRASGAGGQHVNTTDSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIPTGVVV Q E+SQHKNKA+A +L A+LY+LE QK ++ I K ++G G Sbjct: 244 ITHIPTGVVVSQQDEKSQHKNKAKAMKILYARLYDLEKQKSKQEQAIS--RKVQVGTGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352 +IR+Y P V D R N+ +++ +G LD+ + ++ Sbjct: 302 SERIRTYNY-PQGRVTDHRINLTLYKIEEIIQEGKLDEIINNLIS 345 >gi|294790651|ref|ZP_06755809.1| peptide chain release factor 1 [Scardovia inopinata F0304] gi|294458548|gb|EFG26901.1| peptide chain release factor 1 [Scardovia inopinata F0304] Length = 365 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 108/345 (31%), Positives = 166/345 (48%), Gaps = 16/345 (4%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + + P + N + + L R L ++ ++ + D E A E+D Sbjct: 15 DEYHDIERQMSQPEIASNPDKIRKLGRRHAELAQIVTAYQDYKRLSDDLDAAKEFAAEDD 74 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 + + + E + D+ D +E+ AGAGG E+ +A LLRM Sbjct: 75 SFAAEAQRLEEKLPAAEEKLRTAL--IPRDPDDARDTIMEIKAGAGGEEAALFAGDLLRM 132 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193 YTR+AEKR + TE + + E G+K + + LK E GVHR+ RI Sbjct: 133 YTRYAEKRGWATEIMSQNMTELGGVKDIQIAFRNKGAVAPEDGVWASLKYEGGVHRVQRI 192 Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 +S R TS + + V+P DD EIEI D +ID + +SG GGQ VNTT SAVR+ Sbjct: 193 PVTESQGRIQTSAAGVIVFPEADDDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRM 252 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309 THIPTG+VV Q E+SQ +N+A A +L+++L L ++ EE + +++ Sbjct: 253 THIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEEEAQEAADMRHSQVRSLDRS 310 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RTN + + VLDGDL + + + Sbjct: 311 ERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 354 >gi|195978153|ref|YP_002123397.1| peptide chain release factor 1 [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225868513|ref|YP_002744461.1| peptide chain release factor 1 [Streptococcus equi subsp. zooepidemicus] gi|238689817|sp|B4U317|RF1_STREM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|259585255|sp|C0MF07|RF1_STRS7 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|195974858|gb|ACG62384.1| peptide chain release factor 1 PrfA [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225701789|emb|CAW99200.1| peptide chain release factor 1 [Streptococcus equi subsp. zooepidemicus] Length = 360 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 95/348 (27%), Positives = 159/348 (45%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E ++ ++ + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPEVVSDTKRFMALSKEEASTRETVAAYRQYKAIIQSIDDAEEM 66 Query: 76 ALEEDDCSILQETSDNLQRIKL-----EVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E ++E + + + + L D + LE+ AGG E+ Sbjct: 67 IKEAGGDPDIEEMAKEELKEAKAAKETYEDKLKLLLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLAMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E +I D RID Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT + V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ IG G Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G LD+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEIVDALVLYDQ 350 >gi|294010049|ref|YP_003543509.1| peptide chain release factor RF-1 [Sphingobium japonicum UT26S] gi|292673379|dbj|BAI94897.1| peptide chain release factor RF-1 [Sphingobium japonicum UT26S] Length = 363 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 115/350 (32%), Positives = 174/350 (49%), Gaps = 17/350 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R + L E L +E ++ E++ + L + Sbjct: 8 IAQIEARRDEVQASMTRADLA--PEEFVRLSKEYAEIEPVAKAAHEVRRLRQELSALEYM 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-------QFESLLSGEADSNDAYLEVHAGAGGT 128 A ED S + ++L + L AD+ A LE+ AG GG Sbjct: 66 AGGEDADSDPLMREMAQEEMQLIKSRLPDAERALALQLLPKDAADARPAMLEIRAGTGGD 125 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMY R+A+ + +K E + + E G K + G + LK E GVH Sbjct: 126 EAALFAGDLFRMYQRYADAQGWKMELISANASEVGGYKEVVASVTGTGVFAKLKFESGVH 185 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS +++ V P + ++++I++SD +ID YRASGAGGQHVNTTDS Sbjct: 186 RVQRVPVTESGGRIHTSAATVAVLP-EPEEVDVQIADSDLKIDIYRASGAGGQHVNTTDS 244 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+P+G+VV Q ERSQHKNKA+A +LRA++YE E ++ + + K +G Sbjct: 245 AVRITHLPSGIVVTQQDERSQHKNKAKAMQVLRARIYEAERER--AQSEQAGARKAMVGS 302 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIK 354 G +IR+Y P V D R N+ ++L+G L + + A +A Sbjct: 303 GDRSERIRTYNF-PQGRVTDHRINLTLHRLPEILEGPGLSEVIDALVAED 351 >gi|224417848|ref|ZP_03655854.1| peptide chain release factor 1 [Helicobacter canadensis MIT 98-5491] gi|253827187|ref|ZP_04870072.1| peptide chain release factor 1 [Helicobacter canadensis MIT 98-5491] gi|313141390|ref|ZP_07803583.1| peptide chain release factor 1 [Helicobacter canadensis MIT 98-5491] gi|253510593|gb|EES89252.1| peptide chain release factor 1 [Helicobacter canadensis MIT 98-5491] gi|313130421|gb|EFR48038.1| peptide chain release factor 1 [Helicobacter canadensis MIT 98-5491] Length = 356 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 107/341 (31%), Positives = 173/341 (50%), Gaps = 9/341 (2%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 + R ++ + ++ L +E+ L+ + K+ L L ++ Sbjct: 10 IDRYDEISNLLIQTEILSDIKRMTELSKEQSDLEKLVQKSKQYLKNLESIEENKGLLDDK 69 Query: 80 DDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 + + +E + + + L D + YLE+ AG GG E+ + L Sbjct: 70 ELGDLAKEEIKEAELENQNLESEIKILLLPKDPNDEKNIYLELRAGTGGDEAGIFVGDLF 129 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 + Y R+AE + +K E + + G K LIKG AY LK E G HR+ R+ +S Sbjct: 130 KAYIRYAESKGWKVEIISSSENNVGGYKEVIALIKGKGAYSRLKFEGGTHRVQRVPETES 189 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R HTS ++ + P D +E+ I+ +D RI+ +RA G GGQ VNTTDSAVRITHIPTG Sbjct: 190 QGRIHTSAITVAIMP-EVDDVEVVINPNDLRIEVFRAGGHGGQCVNTTDSAVRITHIPTG 248 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315 + V Q E+SQHKNK +A +L+A++YE EL+ + E E+ K+++G G +IR+Y Sbjct: 249 ISVSMQDEKSQHKNKDKALKILKARIYEAELEAQME--QNAEARKSQVGSGDRSERIRTY 306 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 P + D R + S +++ +GDLD ++ +A + Sbjct: 307 NY-PQNRLSDHRIGLTLYSLEEIMLNGDLDQVIEPIIAYFQ 346 >gi|297182948|gb|ADI19096.1| protein chain release factor a [uncultured alpha proteobacterium HF0070_34A12] Length = 353 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 120/348 (34%), Positives = 181/348 (52%), Gaps = 14/348 (4%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D + R + + ++ D E L RE L I ++ D + LA Sbjct: 2 DKVLARRNEVESRLADAASMS-PDELASLSRELSELRPVCEQIDLVKRLEGDRDAAVMLA 60 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQ-----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E + + + E + + ++ L DS +A LEV AG GG E+ Sbjct: 61 EEAAEDAEMAEMAQAEIQEIEARLPEEMNSLQLLLLPRDRDDSRNAILEVRAGTGGDEAA 120 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A+ L MY R+A K ++ E +E+ + G K AT I G + + LK E GVHR+ Sbjct: 121 LFASDLFGMYQRFAGKHGWRFEVMEVSETGIGGYKEATANIAGSDVFARLKFESGVHRVQ 180 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P + ++I++ ESD RID +RASG GGQ VNTTDSAVR Sbjct: 181 RVPETEAGGRIHTSAATVAVLP-EAEDVDIDVQESDLRIDVFRASGPGGQSVNTTDSAVR 239 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIPTG+VV Q E+SQHKN+A+A +LRA+LY+ E + + S K ++G G Sbjct: 240 ITHIPTGIVVSQQDEKSQHKNRAKAMKILRARLYDAERARLQAER--AASRKGQVGSGDR 297 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 +IR+Y P V D R N+ V+ G+ LD+ ++A +A + Sbjct: 298 SERIRTYNF-PQGRVTDHRINLTLYKLDKVIAGEALDEVVEALVAEDQ 344 >gi|146300308|ref|YP_001194899.1| peptide chain release factor 2 [Flavobacterium johnsoniae UW101] gi|146154726|gb|ABQ05580.1| bacterial peptide chain release factor 2 (bRF-2) [Flavobacterium johnsoniae UW101] Length = 254 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 128/247 (51%), Positives = 182/247 (73%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 +LS E DS A +++ AGAGGTES DWA ML+RMY W E +K + L +G+ AGIK Sbjct: 1 MLSDEGDSLSAVVQITAGAGGTESCDWAGMLMRMYMMWGESYGYKIKELNFQEGDVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 + TL +G ++G+LKGE GVHRLVRISP+DSN++RHTSF S++VYP+VDDSIEI+I+ + Sbjct: 61 TVTLEFEGDYSFGYLKGENGVHRLVRISPFDSNAKRHTSFVSVYVYPLVDDSIEIDINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D I T R+SGAGGQ+VN ++ V++ H PTG+ +QC + RSQ N+ +A MLR++LYE Sbjct: 121 DIEITTSRSSGAGGQNVNKVETKVQLVHKPTGIQIQCSETRSQQDNRQRAMQMLRSQLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 +EL+K++ E+ K +I WG QIR+YV+QPY++VKD+RT E + V++G++D F Sbjct: 181 IELKKQQAQRADIEAGKMKIEWGSQIRNYVMQPYKLVKDVRTGYETSDVDGVMNGNIDAF 240 Query: 347 MKATLAI 353 +KA L + Sbjct: 241 LKAYLMM 247 >gi|227487967|ref|ZP_03918283.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum ATCC 51867] gi|227542608|ref|ZP_03972657.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum ATCC 51866] gi|227092058|gb|EEI27370.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum ATCC 51867] gi|227181806|gb|EEI62778.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum ATCC 51866] Length = 358 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 114/348 (32%), Positives = 173/348 (49%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ + L + DP + + + L ++ +++ D EL Sbjct: 8 VDDILAEYQGLEAQMADPEFANDPDNVRKAGKRYSQLQPIVNLNTQLEQARADLADAKEL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A E+ + E + E D +D +E+ AGAGG E+ +A Sbjct: 68 AYEDSAFTAEVERLEPKVVELEEKLADML--APRDPHDPDDMVMEIKAGAGGEEAALFAG 125 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190 L+RMY R+AEK F TE L+ + + G+K TL I+ A+ K E GVHR+ Sbjct: 126 ELVRMYQRYAEKHGFITEVLDESESDLGGVKDMTLSIRSKNPSQDGAWSVFKFEGGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 RI +SN R TS + + VYP D+ ++EI E D R+D YR+SG GGQ VNTTDSAV Sbjct: 186 QRIPVTESNGRIQTSAAGVLVYPEPDEVGQVEIDEKDIRVDVYRSSGKGGQGVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307 R+TH+PTG++V CQ+ERSQ +NKA+A +L+A+L ++E + A E ++ Sbjct: 246 RLTHLPTGIIVTCQKERSQIQNKARAMQVLQARLQQIEE--EKAEAEAAEGRHAQVRTMD 303 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + + VLDGD+D + A + Sbjct: 304 RSERIRTYNW-PENRITDHRIGYKANNLDSVLDGDMDALLMALQDADR 350 >gi|17227769|ref|NP_484317.1| peptide chain release factor 2 [Nostoc sp. PCC 7120] gi|17135251|dbj|BAB77797.1| peptide chain release factor [Nostoc sp. PCC 7120] Length = 292 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 123/255 (48%), Positives = 179/255 (70%) Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159 + + + LLSG D+ A L ++AGAGGT++QDWA MLLRMYTRWAE + +K E + Sbjct: 29 DQWELQQLLSGPYDAEGAVLTINAGAGGTDAQDWAFMLLRMYTRWAEDQGYKVALAEESE 88 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 G+EAGIKSATL I G AYG+L+ E G HRLVRISP+++N +R TSF+ + V P +D+++ Sbjct: 89 GDEAGIKSATLEITGRYAYGYLRSETGTHRLVRISPFNANGKRQTSFAGVEVMPQLDNTV 148 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 +++I + D I T R+ G GGQ+VN ++AVR+ H+PTG+ V+C +ERSQ +NK +A Sbjct: 149 QLDIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAVRCTEERSQLQNKEKALAR 208 Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 L+AKL + +++ + E WG QIR+YV PYQMVKDLRTN+E T+ +DV+ Sbjct: 209 LKAKLLVIAQEQKAQEIAQIRGDMVEASWGNQIRNYVFHPYQMVKDLRTNVETTAIADVM 268 Query: 340 DGDLDDFMKATLAIK 354 +G+LD F+++ L + Sbjct: 269 NGELDMFIQSYLRQE 283 >gi|251771888|gb|EES52462.1| peptide chain release factor 2 [Leptospirillum ferrodiazotrophum] Length = 294 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 141/257 (54%), Positives = 189/257 (73%), Gaps = 2/257 (0%) Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159 + + E +LS E + A LE+H GAGGTESQDWA MLLRMY RWAE + ++T +++ Sbjct: 23 DQLELEEILSDEYSDSPALLEIHPGAGGTESQDWAQMLLRMYLRWAESKGYETAVIDLQP 82 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 GEEAGIKSATL +KG +A+G+L+ E GVHRLVRISP+D+ RRHTSF+S++VYP ++ + Sbjct: 83 GEEAGIKSATLRVKGESAFGYLQAESGVHRLVRISPFDAAKRRHTSFASVFVYPEIEGEV 142 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 +EI + D RIDT+RAS AGGQHVN T SAVR+THIPTG+V+ Q ERSQ +N+ A+ + Sbjct: 143 TVEIRDEDIRIDTFRASSAGGQHVNKTSSAVRLTHIPTGIVISSQNERSQIQNREMAFKV 202 Query: 280 LRAKLYELELQKREEIANIGES--SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 L+A+L+ELE QK++ + SK E WG QIRSYVLQPYQ+VKD RT IE + + Sbjct: 203 LKARLFELERQKKKAELDAISGAESKKENAWGSQIRSYVLQPYQIVKDHRTGIESSRVDE 262 Query: 338 VLDGDLDDFMKATLAIK 354 VLDG +D +++ L + Sbjct: 263 VLDGKIDLYIRGYLLAR 279 >gi|116075738|ref|ZP_01472997.1| peptide chain release factor 1 [Synechococcus sp. RS9916] gi|116067053|gb|EAU72808.1| peptide chain release factor 1 [Synechococcus sp. RS9916] Length = 364 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 105/357 (29%), Positives = 172/357 (48%), Gaps = 20/357 (5%) Query: 14 FDWDNAVQRLS-------FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 D + + RL L + DP + + + + RER L+ + + +Q Sbjct: 1 MDLETLISRLDAATNSFHNLERQLADPDVASDPKRLQSIARERSRLEPLVQDYQSLQQVE 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEV 121 + L E S ++E + + E + E + S D LE+ Sbjct: 61 EERQQAESLLKESRGDSGMEELARLEIQDLNERQATLIERVTLALLPSDPRDERSVMLEI 120 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG E+ WA L RMY R+ ++ + + + + + G + L +KG + L Sbjct: 121 RAGAGGDEACLWAGDLARMYERYGSRQGWNVQPVSANAADLGGYRELILSVKGDAVFSQL 180 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHR+ R+ +S R HTS +++ V P D +E++I ++ I T R+ GAGGQ Sbjct: 181 KFEAGVHRVQRVPATESQGRVHTSTATVAVMP-EADPVEVQIDPTELEISTARSGGAGGQ 239 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN ++AV + H PTG+ V C QERSQ +N+ +A +LRAKLY E Q E A + Sbjct: 240 NVNKVETAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAKLY--ERQLAEANAAESSA 297 Query: 302 SKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + ++G G +IR+Y + V D R + +L+G +DD + A +A ++ Sbjct: 298 RRAQVGTGDRSEKIRTYNAKD-NRVTDHRLGRNFS-LDPMLEGQMDDVIGACIAEEQ 352 >gi|212716435|ref|ZP_03324563.1| hypothetical protein BIFCAT_01359 [Bifidobacterium catenulatum DSM 16992] gi|212660688|gb|EEB21263.1| hypothetical protein BIFCAT_01359 [Bifidobacterium catenulatum DSM 16992] Length = 383 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 106/345 (30%), Positives = 166/345 (48%), Gaps = 16/345 (4%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + + + +P + + + + L R L +S + D E+A E+ Sbjct: 35 EEYHNIEQQMAEPEVASDPDKMRKLGRRHAELGVIVSAYTAYKQVKDDLEAAKEMASEDP 94 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D + + ++ E + D+ D +E+ AG GG E+ +A LLRM Sbjct: 95 DFAEEAKRLESELPAAEEKLRTAL--IPRDPDDARDTIMEIKAGTGGEEAALFAGDLLRM 152 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193 Y R+AEKR + + E G+K L I + LK E GVHR+ RI Sbjct: 153 YMRYAEKRGWSVAVQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEGGVHRVQRI 212 Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 +S R TS + + V+P +D EIEI + D +ID + +SG GGQ VNTT SAVR+ Sbjct: 213 PVTESQGRIQTSAAGVIVFPEADEDDDEIEIDQKDLKIDIFMSSGPGGQSVNTTYSAVRM 272 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309 THIPTG+VV Q E+SQ +N+A A +L+++L L ++ EE A + +++ Sbjct: 273 THIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEEEAAQAADMRHSQVRSLDRS 330 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RTN + + VLDGDL + + + Sbjct: 331 ERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 374 >gi|332707784|ref|ZP_08427811.1| bacterial peptide chain release factor 2 [Lyngbya majuscula 3L] gi|332353487|gb|EGJ33000.1| bacterial peptide chain release factor 2 [Lyngbya majuscula 3L] Length = 294 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 146/289 (50%), Positives = 199/289 (68%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 + D +LEL E D ++L E NL ++ E++ + E LLSG D+ A L ++AGA Sbjct: 1 MEDTKAILELLELETDDALLAEAQTNLTQLNKELDRWELEQLLSGTYDAKGAVLTINAGA 60 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGT++QDWA++LLRMYTRWAE +K E+ G+EAGIKSATL I G AYG+LK E+ Sbjct: 61 GGTDAQDWADLLLRMYTRWAENHGYKVHLAELSPGDEAGIKSATLEIDGLRAYGYLKAEK 120 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G HRLVRISP+++N +R TSF+ + V P VD+++E+EI E D I T RA G GGQ+VN Sbjct: 121 GTHRLVRISPFNANGKRQTSFAGVEVMPAVDNTVELEIPEKDLEITTSRAGGKGGQNVNK 180 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 ++AVRI HIPTG+ V+C QERSQ +NK +A +L+AKL + ++R + E Sbjct: 181 VETAVRIVHIPTGLAVRCTQERSQLQNKEKALVLLKAKLLVIAEEQRAQEIAEIRGDMVE 240 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG QIR+YV PYQMVKDLRT++E T+ +DVLDG+LD F++A L + Sbjct: 241 AAWGNQIRNYVFHPYQMVKDLRTSVETTAVNDVLDGNLDLFIEAYLRQE 289 >gi|254465069|ref|ZP_05078480.1| peptide chain release factor 1 [Rhodobacterales bacterium Y4I] gi|206685977|gb|EDZ46459.1| peptide chain release factor 1 [Rhodobacterales bacterium Y4I] Length = 351 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 117/344 (34%), Positives = 170/344 (49%), Gaps = 12/344 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +QR +L D + L +E L + + D + Sbjct: 7 LEQILQRFQYLEAAMADGAG---GGDIAALAKEYSDLRPVAEQVAAYRKLQSDLREAELM 63 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + E L+ Q L ADS A LE+ G GG E+ +A Sbjct: 64 LADPDMKELAAEEIPALKAAIPEAEHALQLALLPKDAADSRPAMLEIRPGTGGDEAALFA 123 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE + +K + +E E GIK IKG N + LK E GVHR+ R+ Sbjct: 124 GDLLRMYQRYAEGQGWKFDIIEEQMTELGGIKEVVAHIKGDNVFARLKYESGVHRVQRVP 183 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P + ++I I +D RIDT RASGAGGQHVNTTDSAVRITH Sbjct: 184 ATESGGRIHTSAATVAVLP-EAEDVDIHIDANDIRIDTMRASGAGGQHVNTTDSAVRITH 242 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG++V E+SQH+N+ A +L+ +LY+LE Q+ + +++G G + Sbjct: 243 LPTGIIVTSS-EKSQHRNREIAMQVLKTRLYDLERQRIDSER--SADRASQVGSGDRSER 299 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ V+ GDLD+ + A A + Sbjct: 300 IRTYNF-PQGRMTDHRINLTLYKLDQVMGGDLDEIIDALTADNQ 342 >gi|209527112|ref|ZP_03275626.1| peptide chain release factor 1 [Arthrospira maxima CS-328] gi|209492452|gb|EDZ92793.1| peptide chain release factor 1 [Arthrospira maxima CS-328] Length = 371 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 100/351 (28%), Positives = 174/351 (49%), Gaps = 16/351 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + Q L + DP + + E + + + R L++ ++ ++ + + ++ Sbjct: 10 LKSVEQTFQELTLRLADPEIATDPDEFQRVAKTRSSLEDVVNAYQDWKTTQTELAGAKQI 69 Query: 76 --------ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L+E E + +++ + L D + LE+ AG GG Sbjct: 70 LRETGNDPELKEMKEMAALEVEELTTKLQELETRLKILLLPQDPNDDKNIMLEIRAGTGG 129 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ WA L+RMY+R+AE + ++ L + G K A L I+G Y LK E GV Sbjct: 130 DEASIWAGDLVRMYSRYAETKGWRVRLLSESLADMGGFKEAILEIQGARVYSQLKFEAGV 189 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS +++ + P D +E++I D + T R+ GAGGQ+VN + Sbjct: 190 HRVQRVPVTEAGGRVHTSTATVAIMP-EVDDVEVQIDPKDIEMTTARSGGAGGQNVNKVE 248 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 +AV + H PTG+ V C +ERSQ KN+ +A +LRAKLYE +L RE+ + ++++G Sbjct: 249 TAVDLFHKPTGIRVFCTEERSQLKNRERAMQILRAKLYEAKL--REQQDAVTSMRRSQVG 306 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y + V D R + + VL+G + D ++A + + Sbjct: 307 TGSRSEKIRTYNYKD-NRVTDHRLGHNFS-LAPVLEGGIGDLIQACIIQDQ 355 >gi|94264416|ref|ZP_01288206.1| Peptide chain release factor 1 [delta proteobacterium MLMS-1] gi|93455173|gb|EAT05391.1| Peptide chain release factor 1 [delta proteobacterium MLMS-1] Length = 354 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 111/346 (32%), Positives = 178/346 (51%), Gaps = 12/346 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + +R L + DP + + + L +E H+ + + D Sbjct: 1 MFEQLADIAERKRDLEDRLADPAVSGDPGRYRSLAKEHSHVSRLEELYADYRKTSDDLEA 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127 +L EEDD IL+ + ++ + E D + LE+ AG GG Sbjct: 61 NGQLLQEEDDPEILELARQEGEELRQRLAQLDKELRLALVPPDPNDEKNILLEIRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ + L RMY+R+AE+ +K E L E G K LI G + + LK E GV Sbjct: 121 DEASLFVANLFRMYSRYAEQLGWKVEVLSSSATEVGGYKEIIALISGDHVFSRLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS ++ V P + +E+ I+ ++ + D +R+SG GGQ VNTTD Sbjct: 181 HRVQRVPETETQGRVHTSAVTVAVLP-EAEEVELTINPAELKYDVFRSSGPGGQSVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+VV CQ E+SQHKNKA+A +LRA+L L+ ++++ + K+++G Sbjct: 240 SAVRVTHLPTGLVVICQDEKSQHKNKAKALQVLRARL--LDQMQQQQHDQMSSDRKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G +IR+Y P + D R N+ DV+ G LD+ ++ Sbjct: 298 SGDRSERIRTYNF-PQNRLTDHRINLTSYRLEDVMLGRLDEVIEPL 342 >gi|88657945|ref|YP_507408.1| peptide chain release factor 1 [Ehrlichia chaffeensis str. Arkansas] gi|119361539|sp|Q2GGM5|RF1_EHRCR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|88599402|gb|ABD44871.1| peptide chain release factor 1 [Ehrlichia chaffeensis str. Arkansas] Length = 359 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 125/352 (35%), Positives = 186/352 (52%), Gaps = 16/352 (4%) Query: 14 FD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 FD + Q+ L + EDP V +E L IS I + D Sbjct: 3 FDNSLEELSQKFYKLKSMLEDPSQLS-VDSFVAASKEYSELLPVISVIDQYNILQKDIAG 61 Query: 72 LLELALEEDDCSILQETSDNLQRIK-----LEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 L EL + L+ + + + L + D+ +A LE+ AG G Sbjct: 62 LEELINNPETDHELKSLAKEEFYERQKQLPKVKHKLKLSLLPKDKDDARNAILEIRAGTG 121 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ + L RMYT++AE++ +K E + G K +L I G N + LK E G Sbjct: 122 GEEAALFVTDLYRMYTKYAEQKNWKFEQINSSSTGIGGHKEISLCISGSNVFARLKFESG 181 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +++ R HTS +++ V P + ++++I E D RID YR+SG GGQ VNTT Sbjct: 182 VHRVQRVPETEASGRLHTSAATVAVLP-EIEEVDLKIDEKDLRIDVYRSSGPGGQSVNTT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIP+G+VV Q E+SQHKNK++A +LRA+LY LE QKR+ I + K++I Sbjct: 241 DSAVRITHIPSGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKRDAE--ISQMRKSQI 298 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIK 354 G G +IR+Y P + D R N+ D++ +G+LD+F++A +A Sbjct: 299 GSGDRSERIRTYNF-PQSRITDHRINLTLYRLDDIMKEGNLDEFIEALIAED 349 >gi|169351467|ref|ZP_02868405.1| hypothetical protein CLOSPI_02247 [Clostridium spiroforme DSM 1552] gi|169291689|gb|EDS73822.1| hypothetical protein CLOSPI_02247 [Clostridium spiroforme DSM 1552] Length = 358 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 109/352 (30%), Positives = 181/352 (51%), Gaps = 11/352 (3%) Query: 11 GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRL 66 + + R L DP + ++ + + +E+ L + KEI++ + Sbjct: 3 ESMLERLKTMENRYEELGHMLMDPDIGSDIKKMTDVTKEQASLQAAYDLYQEYKEIENGI 62 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 + L + E E ++ +++ ++ + E + D+ D +E+ AG Sbjct: 63 EEAKELAKEHDPEIKEMAKMELAELEEKLPDVIKKLEIELIPKDPNDNKDVIMEIRGAAG 122 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E +A L RMY ++AE + +K E +E D E G + ++KG YG LK E G Sbjct: 123 GDEGNIFAGDLYRMYVKYAESQGWKVEVMEAIDAEAGGYSLISFMVKGEGVYGKLKFESG 182 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ ++ R HTS +++ V P + +++EI+++D RIDTYRASGAGGQH+N T Sbjct: 183 SHRVQRVPKTETQGRVHTSTATVLVMP-EVEEVDVEINKNDLRIDTYRASGAGGQHINKT 241 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITHIPTG+V Q RSQH NK +A L A++Y+ Q++++ K+++ Sbjct: 242 DSAVRITHIPTGIVAASQDGRSQHDNKDKAMKALIARIYDYYQQQQDQQVE--SERKSKV 299 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R + +++G LDD + A + + Sbjct: 300 GTGDRAEKIRTYNY-PQNRVTDHRIGLTIQQLDRIIEGKLDDIITALINEDQ 350 >gi|88606704|ref|YP_505023.1| peptide chain release factor 1 [Anaplasma phagocytophilum HZ] gi|119361507|sp|Q2GKS8|RF1_ANAPZ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|88597767|gb|ABD43237.1| peptide chain release factor 1 [Anaplasma phagocytophilum HZ] Length = 359 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 125/349 (35%), Positives = 184/349 (52%), Gaps = 14/349 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ ++ L + P + RE L +S I++ + + L EL Sbjct: 7 FEGLCEKFRILKQQLSAPETLGTQA-FVVASREYSDLLPIMSLIEKYKSTQKEIAELEEL 65 Query: 76 ALEEDDCSILQETSDNLQRIK-----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L+ + + IK Q L DS +A LE+ AG GG E+ Sbjct: 66 VNSASTDPELRSLAKDESHIKQKLLPKLRHELQLSLLPKDRDDSRNAILEIRAGTGGEEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 + L RMY ++AE++ +K E + I G K A+ I G + + LK E GVHR+ Sbjct: 126 ALFVGNLYRMYLKYAERKNWKVETINISTTGIGGYKEASFSIGGKDVFARLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S+ R HTS +++ V P + ++++I E D RID YR+SG GGQ VNTTDSAV Sbjct: 186 QRVPETESSGRLHTSAATVAVLP-EVEEVDLKIDEKDLRIDVYRSSGPGGQSVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG+VV Q E+SQHKNK++A +LRA+LY LE QKREE I + K++IG G Sbjct: 245 RITHIPTGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKREEE--ISKMRKSQIGSGD 302 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 +IR+Y + D R N+ V+ +GDLD+F+ A +A + Sbjct: 303 RSERIRTYNFL-QSRITDHRINLTSYRLDYVMKEGDLDEFIDALVADDQ 350 >gi|73667064|ref|YP_303080.1| peptide chain release factor 1 [Ehrlichia canis str. Jake] gi|119361538|sp|Q3YS23|RF1_EHRCJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|72394205|gb|AAZ68482.1| bacterial peptide chain release factor 1 (bRF-1) [Ehrlichia canis str. Jake] Length = 359 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 122/349 (34%), Positives = 182/349 (52%), Gaps = 14/349 (4%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + + Q+ L + EDP V +E L IS I + D L E Sbjct: 6 NLEELYQKFCKLKSILEDPSQLS-VDSFVAASKEYSELLPVISVIDQYNSLQKDIADLEE 64 Query: 75 LALEEDDCSILQETSDNLQRIK-----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L + L+ + + + + D+ +A LE+ AG GG E Sbjct: 65 LINNPETDHELKSLAKEEFYERQKQLPKIKNKLKLSLIPKDRDDARNAILEIRAGTGGEE 124 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + + L RMYT++AE++ +K E + G K +L I G N + LK E GVHR Sbjct: 125 AALFVTDLYRMYTKYAEQKNWKFEQINSSSTGIGGHKEVSLCISGSNVFARLKFESGVHR 184 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +++ R HTS +++ V P + ++++I E D RID YR+SG GGQ VNTTDSA Sbjct: 185 VQRVPETEASGRLHTSAATVAVLP-EIEEVDLKIDEKDLRIDVYRSSGPGGQSVNTTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIP+G+VV Q E+SQHKNK +A +LRA+LY LE QKR+ I + K++IG G Sbjct: 244 VRITHIPSGIVVIQQDEKSQHKNKNKALKVLRARLYNLEKQKRDSE--ISQMRKSQIGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIK 354 +IR+Y P + D R N+ D++ +G+LD+F+ A +A Sbjct: 302 DRSERIRTYNF-PQSRITDHRINLTLYRLEDIMKEGNLDEFIDALIAED 349 >gi|229496829|ref|ZP_04390538.1| peptide chain release factor 2, programmed [Porphyromonas endodontalis ATCC 35406] gi|229316240|gb|EEN82164.1| peptide chain release factor 2, programmed [Porphyromonas endodontalis ATCC 35406] Length = 318 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 128/315 (40%), Positives = 195/315 (61%), Gaps = 11/315 (3%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MR+ + + I + ++ + + L ++ + +E Q +E + Sbjct: 1 MRKVKEIRRWIEAYESVESAVEEVK--LSFDFYKEGVAEEEEVDQAYQIALSLIENVELR 58 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++L E D A L+V+AGAGGTESQDWA+ML+R+Y RWAE +K DG+EAGI Sbjct: 59 NMLRREEDRLGAVLKVNAGAGGTESQDWASMLVRLYQRWAENHDYKVTITNWQDGDEAGI 118 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ T+ I+G AYG+LK E GVHRLVR+SPY++ +R TSF+S++V P+VDDSIEI ++ Sbjct: 119 KTVTMQIEGDLAYGFLKSENGVHRLVRVSPYNAQGKRMTSFASVFVVPLVDDSIEIAVNP 178 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAW 277 ++ DT+R+SGAGGQ+VN ++ VR+ + +V++ + RSQ N+ A Sbjct: 179 ANLSWDTFRSSGAGGQNVNKVETGVRLHYQFKDPDTGEEREIVIENTESRSQLDNRENAL 238 Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 +LR++LY++EL+KR E+ K +I WG QIRSYV + VKD RTN + ++ + Sbjct: 239 RLLRSQLYDIELEKRRAAQAEVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSNVNA 297 Query: 338 VLDGDLDDFMKATLA 352 V+DGD+DDF+KA L Sbjct: 298 VMDGDIDDFIKAYLM 312 >gi|315654795|ref|ZP_07907700.1| peptide chain release factor RF1 [Mobiluncus curtisii ATCC 51333] gi|315490756|gb|EFU80376.1| peptide chain release factor RF1 [Mobiluncus curtisii ATCC 51333] Length = 367 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 107/347 (30%), Positives = 167/347 (48%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++ L + DP L N A+ + R L + ++ D E+ Sbjct: 11 VEALLEEYHQLEVQMSDPDLHSNQAHARKVGRRYAELSRVNTVVQGWLQARDDLEAGREM 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D E + D+ D +E+ AG GG ES +A Sbjct: 71 --AGEDPDFAAEIPGLEAAFEQANADLIEALTPRDPDDARDVIMEIKAGEGGEESALFAG 128 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVH 188 L+RMY +AEK + + L + + + G+K A++ + LK E GVH Sbjct: 129 DLMRMYQHYAEKMGWTVQVLGLTESDLGGVKDASIAFKAKGNPSPEEGVWAHLKYEGGVH 188 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS + + V P +++ +IEI +D RID YR+SG GGQ VNTTDS Sbjct: 189 RVQRVPVTESQGRIHTSAAGVLVMPEAEETGDIEIDPNDLRIDVYRSSGPGGQSVNTTDS 248 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307 AVRITH+PTG+VV Q E+SQ +NK +LR++L +LE +KRE A +S+ + Sbjct: 249 AVRITHLPTGIVVSMQNEKSQLQNKEAGMRVLRSRLMQLEAEKREAEAAEARASQVRTVD 308 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RT + + VL+GDL +++ + Sbjct: 309 RSERIRTYNF-PENRIADHRTGYKAYNLDQVLNGDLAPVIQSAIDAD 354 >gi|296282001|ref|ZP_06859999.1| peptide chain release factor 1 [Citromicrobium bathyomarinum JL354] Length = 355 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 113/345 (32%), Positives = 169/345 (48%), Gaps = 13/345 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R + + + L E R+ L+ E++ + L E+ Sbjct: 8 LDQIANRFAEIEARMASGQL--EGEEFVQASRDYAELEPVAKLALELKAAREEVAGLDEM 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFE--SLLSGEADSNDAYLEVHAGAGGTESQDW 133 + + + E ++ +Q L AD+ A LE+ AG GG E+ + Sbjct: 66 LADPE-MRDMAEEELEALNQRIPELEQQLAVAMLPRDSADAKPAMLEIRAGTGGDEAALF 124 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A L RMY R+A ++ +K E + + E G K + G + LK E GVHR+ R+ Sbjct: 125 AGDLYRMYERFAGEQGWKVEPVSMSASEVGGFKEIVAHVTGTGVFAKLKFESGVHRVQRV 184 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +S R HTS +++ V P D +++++ D +IDTYRASGAGGQHVNTTDSA+RIT Sbjct: 185 PETESGGRIHTSAATVAVLP-EPDEVDVQVDPGDLKIDTYRASGAGGQHVNTTDSAIRIT 243 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H+PTG+VV CQ RSQHKN+ QA +LRA+LY E Q+ E+ K +G G Sbjct: 244 HLPTGLVVTCQDGRSQHKNREQAMQVLRARLY--EQQRDAAQGAEAEARKAMVGSGDRSE 301 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIK 354 +IR+Y P V D R + ++ G L + + A +A Sbjct: 302 RIRTYNF-PQGRVTDHRIGLTLQKLPQIIAGPGLGELVDALIAED 345 >gi|71894205|ref|YP_278313.1| peptide chain release factor 1 [Mycoplasma synoviae 53] gi|119361563|sp|Q4A6L9|RF1_MYCS5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|71850993|gb|AAZ43602.1| peptide chain release factor 1 [Mycoplasma synoviae 53] Length = 359 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 109/334 (32%), Positives = 167/334 (50%), Gaps = 6/334 (1%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN----LILL 73 N ++ L ++ P + ++ + L +E + + E + + +L Sbjct: 11 NIKEKYQDLKSQLNLPEIIADIKKYTKLSKEINSISEIVETFDEFLNLEENIKSSKELLD 70 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E +E S + E + L + D+ D +E+ AGG E+ + Sbjct: 71 IETDAEVIMLAKEEISQAQSKQLELEEKLKVLLLPKDKNDNKDVIVEIRGAAGGDEANIF 130 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A L RMYT+W ++ K L++ G T I+G AY LK E GVHR+ RI Sbjct: 131 AGDLYRMYTKWCQQNNMKLSTLDLSPAVSGGFTLVTFSIQGEKAYSKLKFESGVHRVQRI 190 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 ++ R HTS +++ V P +DD IEIEI + D RID +R+SG GGQ VNTTDSAVRIT Sbjct: 191 PVTETKGRVHTSTATVTVMPEIDDDIEIEIKKEDLRIDVFRSSGNGGQSVNTTDSAVRIT 250 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H PTG+VV CQ+ +SQ +NK A +L++KLY+LELQK++ + +IR Sbjct: 251 HFPTGIVVSCQEGKSQIQNKDIAMRILKSKLYDLELQKKQSEESGYRKLAGSGARSEKIR 310 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +Y P V D R + + V++G L+ + Sbjct: 311 TYNY-PQDRVTDHRIGYSTS-LNYVMEGRLNPII 342 >gi|58579040|ref|YP_197252.1| peptide chain release factor 2 [Ehrlichia ruminantium str. Welgevonden] gi|58617098|ref|YP_196297.1| peptide chain release factor 2 [Ehrlichia ruminantium str. Gardel] gi|58416710|emb|CAI27823.1| Peptide chain release factor 2 (RF-2) [Ehrlichia ruminantium str. Gardel] gi|58417666|emb|CAI26870.1| Peptide chain release factor 2 (RF-2) [Ehrlichia ruminantium str. Welgevonden] Length = 251 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 148/249 (59%), Positives = 194/249 (77%), Gaps = 1/249 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALEIHDGEEAGI 165 + S EAD ND ++E+ +GAGGTES DW+NMLLRMY RWAE FKT+ + DGEE G+ Sbjct: 1 MFSDEADQNDCFIEIQSGAGGTESNDWSNMLLRMYIRWAEIYHNFKTQVVYKLDGEETGV 60 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSA + + G NAYGW K E G+HRLVRISP++SN++RHT+F+S+ V PV +++ +I+I + Sbjct: 61 KSAIIKVIGYNAYGWSKTESGIHRLVRISPFNSNAKRHTTFASVLVSPVTNENFDIQIHD 120 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D RIDTYRASGAGGQHVN T+SAVRITHIP+G+VVQCQ RSQH+N +A+N+LR++LY Sbjct: 121 KDLRIDTYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNNRSQHQNLGEAYNLLRSRLY 180 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 +L+LQ++E+ S + +IGWG QIRSYV+ PYQMVKD+RT E + + VLDGDLD Sbjct: 181 QLKLQEKEKKMAQEHSQRCDIGWGNQIRSYVMHPYQMVKDIRTGYETGNVNSVLDGDLDA 240 Query: 346 FMKATLAIK 354 F+ ATL K Sbjct: 241 FIIATLTKK 249 >gi|27904663|ref|NP_777789.1| peptide chain release factor 1 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|29427417|sp|P59456|RF1_BUCBP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|27904060|gb|AAO26894.1| peptide chain release factor 1 [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 362 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 106/343 (30%), Positives = 177/343 (51%), Gaps = 7/343 (2%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 + ++ +R + + D + N + + L +E L + + ++ D + Sbjct: 6 MKKLESLHRRYEEIESMLSDRTVISNQEKFRELSQEYLKLSDINYCFVQWKNCNHDVIET 65 Query: 73 LELALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L L+ + + ++ +++K Q L D + +LE+ + +GG E+ Sbjct: 66 KLLLLDSELHDVAEQELQMLSKKMKKIETEIQVLLLPCDPNDQQNCFLEIRSASGGDEAA 125 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 ++ L RMY +++E + +KT + + + G K + I G +YG LK E G HR+ Sbjct: 126 IFSGDLFRMYIKYSEFQNWKTNIIHMTHSLKGGYKDIIVKITGKGSYGKLKFESGGHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS + V PVV +++ +D +IDT+R+SGAGGQHVNTTDSAVR Sbjct: 186 RVPKTESQGRVHTSTCIVAVIPVVPKKEIEKVNINDLKIDTFRSSGAGGQHVNTTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIP+G VV+CQ ERSQHKNKA+A ++L +++ EL + + I + +G G Sbjct: 246 ITHIPSGQVVECQDERSQHKNKAKALSVLVSRIKAAELYNQRKKNAI--QRRDLLGTGMR 303 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + R+Y V D R N+ +VLDG LD ++ + Sbjct: 304 SDRNRTYNFA-QNRVTDHRINLVVYCLDEVLDGKLDVLIEPII 345 >gi|84494539|ref|ZP_00993658.1| peptide chain release factor 1 [Janibacter sp. HTCC2649] gi|84384032|gb|EAP99912.1| peptide chain release factor 1 [Janibacter sp. HTCC2649] Length = 360 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 103/351 (29%), Positives = 170/351 (48%), Gaps = 13/351 (3%) Query: 13 LFDW-DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + Q + L + DP + + + + + + L ++ Q D Sbjct: 1 MFESAEVLAQEHATLEREMGDPAIASDPDKLREINKRYAALGPTVAAYAAWQLATDDLEA 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ELA E+ + + + + + EV AG GG ES Sbjct: 61 ARELATEDAGFAAEVPALETSANDAADRLRRLLIPRDPDDDRDVIV--EVKAGEGGEESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGE 184 +A LLRMY R+AE+R ++TE L + + G K + + G + LK E Sbjct: 119 LFAGDLLRMYLRYAERRGWRTEVLGSTETDLGGFKDVQVSVKSKKAPLPGEGPWARLKYE 178 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ ++ R HTS + +WV P + +E+EI +D RID +R+SG GGQ VN Sbjct: 179 GGVHRVQRVPITETQGRIHTSAAGVWVMP-EAEEVEVEIHANDLRIDVFRSSGPGGQSVN 237 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVR+TH+PTG VV CQ E+SQ +N+ A +LRA+L+++ + + + +S+ Sbjct: 238 TTDSAVRLTHLPTGTVVICQNEKSQLQNREAAMRVLRARLHQMAMDEANAASADIRASQV 297 Query: 305 E-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +IR+Y + D RT + + VL G+LD +++ + Sbjct: 298 RTVDRSERIRTYNFA-ENRISDHRTGFKAYNLDTVLGGELDAVVESAMTAD 347 >gi|261338133|ref|ZP_05966017.1| peptide chain release factor 1 [Bifidobacterium gallicum DSM 20093] gi|270276761|gb|EFA22615.1| peptide chain release factor 1 [Bifidobacterium gallicum DSM 20093] Length = 362 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 106/344 (30%), Positives = 165/344 (47%), Gaps = 16/344 (4%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 A++ + + P + + + L R L + + + + D E+A Sbjct: 10 QTALEEYRNIEQRMAQPDVASDPNAMRKLGRRHAELAGIVGPYQRYRSMIDDLEAAREMA 69 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 E+ D + + + E + D+ D +E+ AG GG E+ +A Sbjct: 70 AEDPDFAEEAKRLETQLDDAAEALRTAL--IPRDPDDARDMIMEIKAGTGGEEAALFAGD 127 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHR 189 LLRMYTR+AEKR + + E G+K L I + LK E GVHR Sbjct: 128 LLRMYTRYAEKRGWSVTIQSENSTELGGVKDVQLAIRAKGTVAPEDGVWASLKYEGGVHR 187 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 + RI +S R TS + + V+P +D EIEI D +ID + +SG GGQ VNTT S Sbjct: 188 VQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYS 247 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI-- 306 AVR+THIPTG+VV Q E+SQ +N+A A +L+++L L ++ +E A + +++ Sbjct: 248 AVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRS 305 Query: 307 -GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y P + D RTN + + VLDGDL + + Sbjct: 306 LDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDS 348 >gi|19552424|ref|NP_600426.1| peptide chain release factor 1 [Corynebacterium glutamicum ATCC 13032] gi|62390088|ref|YP_225490.1| peptide chain release factor 1 [Corynebacterium glutamicum ATCC 13032] gi|145295339|ref|YP_001138160.1| peptide chain release factor 1 [Corynebacterium glutamicum R] gi|24418635|sp|Q8NR57|RF1_CORGL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166223553|sp|A4QDG1|RF1_CORGB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|21323967|dbj|BAB98593.1| Protein chain release factor A [Corynebacterium glutamicum ATCC 13032] gi|41325424|emb|CAF19904.1| PEPTIDE CHAIN RELEASE FACTOR 1 (RF-1) [Corynebacterium glutamicum ATCC 13032] gi|140845259|dbj|BAF54258.1| hypothetical protein [Corynebacterium glutamicum R] Length = 358 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 112/346 (32%), Positives = 172/346 (49%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ + L + DP L + A+ + + L I+ +++ D E+ Sbjct: 8 VDDILSEYHGLEQQMADPELHNDAAAARRVGKRYSELQPIINVHRDLVSAQEDLEAAREM 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D E + E D D +E+ AGAGG E+ +A Sbjct: 68 --AHEDHEFQAEAERLEVEVVELEEKLADLLAPRDPHDGEDIVMEIKAGAGGEEAALFAG 125 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-----YGWLKGEQGVHRL 190 LLRMY ++A+K F E L+ + + G+K TL I+ + K E GVHR+ Sbjct: 126 DLLRMYQKFADKHGFVVEVLDSAESDLGGVKDITLSIRSRQPSRDGAWSQFKFEGGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R TS + + VYP D+ +EI E D R+D YR+SG GGQ VNTTDSAV Sbjct: 186 QRVPVTESQGRIQTSAAGVLVYPEPDEVENVEIDEKDIRVDVYRSSGKGGQGVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG+VV CQ+ERSQ +N+A+A +L A+L ++ ++ A G +++ + Sbjct: 246 RITHLPTGLVVTCQKERSQIQNRARAMQVLAARLQAMKEEEAAAEAATGRAAQIRTMDRS 305 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + + VLDG+LDD A A ++ Sbjct: 306 ERIRTYNW-PENRISDHRIGFKANNLDSVLDGELDDLFTALQAAER 350 >gi|190570518|ref|YP_001974876.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019274|ref|ZP_03335081.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|238054477|sp|B3CL87|RF1_WOLPP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|190356790|emb|CAQ54152.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995383|gb|EEB56024.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 363 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 124/348 (35%), Positives = 188/348 (54%), Gaps = 15/348 (4%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + + ++ S + E+P E +E L I I E + L E Sbjct: 6 NLQDLKKKFSDVERNLENPTNLS-QKEFVSFSKEYSELRPIIEIIDEYNILKEEISDLEE 64 Query: 75 LALEEDDCSILQETSDNLQRIK------LEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 + +E+ ++E + K + L E DS +A LE+ AG GG Sbjct: 65 IMKDENSDGDIKELAKEELLEKQKIVLPKVKAKLKLALLPKDEDDSRNAILEIRAGTGGE 124 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A ML RMY ++AE+R +K E + I + G K A+ LI G + LK E GVH Sbjct: 125 EAALFAAMLFRMYQKYAERRNWKFEPISISNTGIGGYKEASALINGTEVFARLKFESGVH 184 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S+ R HTS +++ + P + ++ EI E D RID YR+SG GGQ VNTTDS Sbjct: 185 RVQRVPETESSGRLHTSAATVAILP-EVEEVDFEIEEKDLRIDVYRSSGPGGQSVNTTDS 243 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+TH+PTG+VV Q E+SQHKNKA+A +LRA+LYE+E QK+E + K++IG Sbjct: 244 AVRVTHLPTGIVVIQQDEKSQHKNKAKALKVLRARLYEIERQKKEMERSTM--RKSQIGS 301 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352 G +IR+Y P + D R N+ ++ +G+LD+F++A ++ Sbjct: 302 GDRSERIRTYNF-PQSRITDHRINLTSHRLEQIIKEGELDEFIEALIS 348 >gi|57234023|ref|YP_181923.1| peptide chain release factor 1 [Dehalococcoides ethenogenes 195] gi|119361531|sp|Q3Z776|RF1_DEHE1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|57224471|gb|AAW39528.1| peptide chain release factor 1 [Dehalococcoides ethenogenes 195] Length = 355 Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats. Identities = 99/345 (28%), Positives = 169/345 (48%), Gaps = 7/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +N +R + + P + + + L +ER L + + + + L Sbjct: 5 LENCEKRFREIEEEISKPEVINDARLVRTLAQERADLQTKVEMYRRYKAISKELEDTKNL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + ++ + E L D +E+ AG GG E+ Sbjct: 65 LEIEKDEDMKDMVRGEIASLEKSMADLYTQMTLELLPKDPNDDKSIIMEIRAGTGGDEAG 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L +MYTR+A + +KTE ++I+ IK + G A+ LK E+GVHR+ Sbjct: 125 LFAADLYKMYTRYALLKNWKTEVIDINGNVAGIIKEVVFEVNGKGAFSRLKYERGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +++ R HTS +++ V P + ++I+I+ D R+D + +SGAGGQ+V +A+R Sbjct: 185 RVPQTEASGRIHTSTATVAVLP-QVEEVDIDINMDDVRVDIFHSSGAGGQNVQKVATAIR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA-NIGESSKTEIGWGR 310 +THIPTG+VV CQ ERSQ KNK +A+ +LRA+L ELE K +E + + Sbjct: 244 LTHIPTGLVVCCQDERSQLKNKNKAFAVLRARLMELEQSKVDEERTESRRAQVGQADRSE 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + + +L+G LD+ + ++ Sbjct: 304 KIRTYNF-PQDRLTDHRIGLTAHNLPHILEGYLDEIIDTLATHEQ 347 >gi|157363244|ref|YP_001470011.1| peptide chain release factor 1 [Thermotoga lettingae TMO] gi|157313848|gb|ABV32947.1| peptide chain release factor 1 [Thermotoga lettingae TMO] Length = 347 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 114/335 (34%), Positives = 174/335 (51%), Gaps = 13/335 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++ L K +L ++ + + E L A+ ++++ + Sbjct: 9 IKDVNKKTIELEQKLSSSNL--DIEQLREFSVEYSRLKEALEIYQQLKQVEEEM----NF 62 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 E E R + E Q S L + N+ E+ AG GG E+ +A Sbjct: 63 WQEAMKEDPSLEEDFLKARKQYEDIISQLISHLLPFEEHNNVIFEIRAGTGGEEAALFAA 122 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY R+AE++ ++ E + HD G K +KG +AY +LK E GVHR+ R+ Sbjct: 123 DLYRMYIRYAERKGWQVELSDFHDTGLGGFKEIVFFVKGKSAYKYLKYESGVHRVQRVPV 182 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S+ R HTS +++ V P +EI I D +IDT++ASG GGQ+VN T+SAVRITH+ Sbjct: 183 TESSGRIHTSTATVAVLP-EVSDVEIHIDPKDLKIDTFKASGHGGQYVNKTESAVRITHL 241 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WGRQI 312 PTG++V CQ ERSQH+N+ +A +LRAKLYE+E +K + + K +IG +I Sbjct: 242 PTGIIVSCQSERSQHQNRERALVILRAKLYEIEQEKIN--SQLSNQRKNQIGSAERSEKI 299 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 R+Y P V D R N ++LDGDLD+ + Sbjct: 300 RTYNF-PQNRVTDHRINYTTYRLQEILDGDLDELI 333 >gi|114569197|ref|YP_755877.1| peptide chain release factor 1 [Maricaulis maris MCS10] gi|119361557|sp|Q0ARZ8|RF1_MARMM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|114339659|gb|ABI64939.1| bacterial peptide chain release factor 1 (bRF-1) [Maricaulis maris MCS10] Length = 357 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 113/347 (32%), Positives = 170/347 (48%), Gaps = 15/347 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R + + + E L +E L ++ + L E+ Sbjct: 8 LAQVIDRFDQVEARLGAAG---DADEIVKLSKEHAELKPVAEKANALKSARAELAELAEM 64 Query: 76 ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 +D + + L + DS +A +E+ AG GG E+ Sbjct: 65 MEGDDAEMAEMAREEFYALKERLPELEHAMSLMLLPKDKDDSANAMIEIRAGTGGDEAAI 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L MY R+A+ + + E + +GE G K I G +G LK E GVHR+ R Sbjct: 125 FAGNLYGMYQRYAQLQGWSWELVSASEGEHGGYKEVVAAISGNGVFGRLKFESGVHRVQR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS +++ + P + I+IE+ D R+DT RASGAGGQHVN TDSAVR+ Sbjct: 185 VPATESQGRIHTSAATVAIMP-QPEDIDIELDMGDVRVDTMRASGAGGQHVNKTDSAVRM 243 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIPTG+VV CQ E+SQH+N+A+A +L+AKLY+ +Q+ A K +IG G Sbjct: 244 THIPTGLVVVCQ-EKSQHQNRARAQEILKAKLYD--MQREAANAERAAERKGQIGSGDRS 300 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 +IR+Y P V D R N+ D++ GD LD+ + A +A + Sbjct: 301 ERIRTYNY-PQGRVSDHRINLTLYKLDDIVAGDGLDEVVAALIAEDQ 346 >gi|115522190|ref|YP_779101.1| peptide chain release factor 1 [Rhodopseudomonas palustris BisA53] gi|122298096|sp|Q07VB3|RF1_RHOP5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|115516137|gb|ABJ04121.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodopseudomonas palustris BisA53] Length = 359 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 108/344 (31%), Positives = 168/344 (48%), Gaps = 16/344 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + R + L + P N + RE L+ + +K + + + L Sbjct: 9 LDILLARHAALEAQLLGP---VNSEHYVKITRELAELNPLVDAVKAYRQVRDEIGDIDSL 65 Query: 76 ALEEDDCSILQETSDNLQ-----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + D L+ + + + L D + LEV AG GG E+ Sbjct: 66 IADPDSDPELRAMAQAEHAALEEHEAELAQQIRIALLPKDAMDDRNVMLEVRAGTGGDEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY ++A + + E + +G G K +KG A+ LK E GVHR+ Sbjct: 126 SLFAGDLFRMYEKFAALQGWSVEVISASEGAAGGFKEIIAEVKGRGAFAKLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + +++EI + D +IDT RA GAGGQHVN T+SA+ Sbjct: 186 QRVPDTETQGRIHTSAATVAVMP-EVEEVDVEIKQDDLKIDTMRAQGAGGQHVNKTESAI 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+VV Q RSQHKN+A A N+LR+++Y+ E Q+ + A K ++G G Sbjct: 245 RITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAEQQRLD--AARSAERKEKVGSGD 302 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350 +IR+Y P V D R N+ V+ G+ L + + A Sbjct: 303 RSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGEALGELVDAL 345 >gi|220920161|ref|YP_002495462.1| peptide chain release factor 1 [Methylobacterium nodulans ORS 2060] gi|254790889|sp|B8IUB4|RF1_METNO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|219944767|gb|ACL55159.1| peptide chain release factor 1 [Methylobacterium nodulans ORS 2060] Length = 359 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 108/347 (31%), Positives = 171/347 (49%), Gaps = 13/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + R + + L RE LD+ ++ I+ + + + + Sbjct: 9 LDAILARHDIVTATLSAGE--ADSESFVQLSRELSDLDDVVAAIRAYRAADAELRGVEAM 66 Query: 76 ALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E D + + Q L AD A LE+ AG GG E+ Sbjct: 67 LEEGDPEMRALAAEEKPEVEAARDAAAKALQILLLPKDSADEKSAILEIRAGTGGDEAAL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY R+A+ + +K E + G G + +KG + LK E G HR+ R Sbjct: 127 FAGDLFRMYARYADLKGWKVEVVSESPGTMGGYREVVAEVKGRGVFARLKFESGAHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ V P + ++I ++E+D +IDT RA GAGGQHVN T+SA+RI Sbjct: 187 VPETETQGRIHTSAATVAVLP-EAEEVDIHVNEADLKIDTMRAQGAGGQHVNKTESAIRI 245 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+P+G+VV Q+ERSQHKN+A+A +LRA+LY E ++ ++ A + ++G G Sbjct: 246 THMPSGIVVFVQEERSQHKNRARAMAVLRARLY--EQERSQKDAARAADRRAQVGSGDRS 303 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIKK 355 +IR+Y P V D R N+ +VL G LD+ + A + + Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTLYKLEEVLAGTALDELVDALVTEHQ 349 >gi|170077656|ref|YP_001734294.1| peptide chain release factor 1 [Synechococcus sp. PCC 7002] gi|238689045|sp|B1XJH8|RF1_SYNP2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|169885325|gb|ACA99038.1| peptide chain release factor 1 [Synechococcus sp. PCC 7002] Length = 363 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 105/348 (30%), Positives = 177/348 (50%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + Q + + DP + N E + + + R L+ ++ + ++ + E+ Sbjct: 10 LKSVEQTFQEMTRRLADPDIATNPDELQRVAKIRSSLEETVNTFNQWKEAQEELRGAKEI 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130 E ++E + + L D + LE+ AG GG E+ Sbjct: 70 LKESAGDPEMKEMAALEVEELENTIDTLENRLKILLLPKDPNDEKNIMLEIRAGTGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA LLRMY+R+AE + ++ + L + G K+ L I+G Y LK E GVHR+ Sbjct: 130 SIWAGDLLRMYSRYAEGQNWRVKLLSESAADMGGFKAVILEIQGEQVYSKLKYEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS ++I V P D +E+EI D + T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPVTEAGGRVHTSTATIAVMP-EVDDVEVEIDPKDIEMTTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ V C +ERSQ +N+ +A +LRAKLYE+ELQ+++E + K+++G G Sbjct: 249 DLFHKPTGIRVFCTEERSQLQNRERAMQILRAKLYEMELQRQQEE--VSSMRKSQVGTGA 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D R + S + L+GD++D ++A ++ + Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLG-QNFSLAPALEGDIEDMLQACISQDQ 352 >gi|289675203|ref|ZP_06496093.1| peptide chain release factor 2 [Pseudomonas syringae pv. syringae FF5] gi|302185552|ref|ZP_07262225.1| peptide chain release factor 2 [Pseudomonas syringae pv. syringae 642] gi|330896019|gb|EGH28242.1| peptide chain release factor 2 [Pseudomonas syringae pv. japonica str. M301072PT] gi|330936871|gb|EGH41012.1| peptide chain release factor 2 [Pseudomonas syringae pv. pisi str. 1704B] gi|330968992|gb|EGH69058.1| peptide chain release factor 2 [Pseudomonas syringae pv. aceris str. M302273PT] gi|330975436|gb|EGH75502.1| peptide chain release factor 2 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 248 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 152/247 (61%), Positives = 192/247 (77%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SG+ D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F +E+ GE AGIK Sbjct: 1 MFSGDMDPNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 AT+ IKG A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ + Sbjct: 61 GATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPA 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYR+SGAGGQHVNTTDSAVRITH+PT VV CQ ERSQH NK A MLRA+LYE Sbjct: 121 DLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 E+QKR + E +K++IGWG QIRSYVL +KDLRTNIE++ VLDGD+D++ Sbjct: 181 QEVQKRNAASQALEDTKSDIGWGHQIRSYVLD-ASRIKDLRTNIERSDCDKVLDGDIDEY 239 Query: 347 MKATLAI 353 + A+L Sbjct: 240 LIASLKQ 246 >gi|148377997|ref|YP_001256873.1| peptide chain release factor 1 [Mycoplasma agalactiae PG2] gi|238686692|sp|A5IZH6|RF1_MYCAP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|148292043|emb|CAL59435.1| Peptide chain release factor 1 [Mycoplasma agalactiae PG2] Length = 358 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 110/349 (31%), Positives = 171/349 (48%), Gaps = 6/349 (1%) Query: 11 GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 +F Q L K +DP + N+ E + +E + ++ L D Sbjct: 3 KTMFKSLSEIKQSYLELLKKIDDPEVISNIKEYSAINKEIAKIREISEKFITYENILKDV 62 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYLEVHAGAG 126 + +++ + + E ++ L E D + +E+ AG Sbjct: 63 EQAKIMLESKNEEEVEFAKMIIDENSLKLDELEEKLKILILPQDENDDKNIIVEIRGAAG 122 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L RMY+++A++ F+ + L + G IKG AY K E G Sbjct: 123 GDEANIFAGDLFRMYSKFADELGFRLKILSTNSASAGGFSQIVFSIKGEKAYSKFKFESG 182 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S R HTS +++ V P +DDS+EIEI SD +ID +R+SGAGGQ VNTT Sbjct: 183 VHRVQRVPVTESQGRIHTSTTTVTVMPEIDDSVEIEIKPSDLKIDVFRSSGAGGQSVNTT 242 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PT +VV Q ERSQ N+ A +L++KLY+LE+QK+ E + Sbjct: 243 DSAVRITHLPTNIVVTSQDERSQIANRETALTILKSKLYDLEMQKKAEEESGYRKLAGHG 302 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + + +++G L + A LA ++ Sbjct: 303 DRSEKIRTYNY-PQDRVTDHRISFSTS-LKPIMEGKLTPIIDALLAEEQ 349 >gi|94271210|ref|ZP_01291905.1| Peptide chain release factor 1 [delta proteobacterium MLMS-1] gi|93450530|gb|EAT01680.1| Peptide chain release factor 1 [delta proteobacterium MLMS-1] Length = 354 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 111/346 (32%), Positives = 178/346 (51%), Gaps = 12/346 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + +R L + DP + + + L +E H+ + + D Sbjct: 1 MFEQLADIAERKRDLEDRLADPAVSGDPGRYRSLAKEHSHVSRLEELYADYRKTSDDLEA 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127 +L EEDD IL+ + ++ + E D + LE+ AG GG Sbjct: 61 NGQLLQEEDDPEILELARQEGEELRQRLAQLDKELRLALVPPDPNDEKNILLEIRAGTGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ + L RMY+R+AE+ +K E L E G K LI G + + LK E GV Sbjct: 121 DEASLFVANLFRMYSRYAEQLGWKVEVLSSSTTEVGGYKEIIALISGDHVFSRLKYESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS ++ V P + +E+ I+ ++ + D +R+SG GGQ VNTTD Sbjct: 181 HRVQRVPETETQGRVHTSAVTVAVLP-EAEEVELSINPAELKYDVFRSSGPGGQSVNTTD 239 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+PTG+VV CQ E+SQHKNKA+A +LRA+L L+ ++++ + K+++G Sbjct: 240 SAVRVTHLPTGLVVICQDEKSQHKNKAKALQVLRARL--LDQMQQQQHDQMSSDRKSQVG 297 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G +IR+Y P + D R N+ DV+ G LD+ ++ Sbjct: 298 SGDRSERIRTYNF-PQNRLTDHRINLTSYRLEDVMLGRLDEVIEPL 342 >gi|328773067|gb|EGF83104.1| hypothetical protein BATDEDRAFT_85755 [Batrachochytrium dendrobatidis JAM81] Length = 367 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 145/354 (40%), Positives = 219/354 (61%), Gaps = 5/354 (1%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQHLDNAISFIKE 61 +S+ + +W+ + S L + +D +LW + EA + ++ L++ I+ + Sbjct: 8 ISKLFKTIDEKKNWEVVESKASDLRDRLKDDNLWTTDTKEAIEIQKDISRLESEIAEHSK 67 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + ++ELA EE D ++L+E +++ ++ ++ +SL++ E D + Y+E+ Sbjct: 68 FTVKWNETQSMIELAKEEGDDTLLKEVVADMEDLEAQLRQYFIKSLMTDEVDQSGCYIEI 127 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG ES DW +ML RMY RW + ++ G+ AG+KS+T I+G AYGW Sbjct: 128 RAGAGGAESCDWVSMLTRMYERWGADQGHTVTSIAQVKGDVAGLKSSTTQIQGDYAYGWS 187 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV----VDDSIEIEISESDCRIDTYRASG 237 K E GVHR VR+SP+DSN++RHTSF S+ V P+ + IEIS ++ +++ RA G Sbjct: 188 KNESGVHRFVRVSPFDSNAKRHTSFVSVQVLPILSTSRLSTKTIEISTNELKLEFMRAQG 247 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 AGGQHVN T+SAVR+THIPTG+ V CQ ERSQ +NKA A ML++KLY++EL K Sbjct: 248 AGGQHVNKTESAVRMTHIPTGITVFCQSERSQVQNKATALEMLKSKLYQVELDKLSRQKQ 307 Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++ E WG IRSYVLQPYQ+VKD RT + T+ DVL+G L +FM++ L Sbjct: 308 EHHANLGENAWGNHIRSYVLQPYQLVKDTRTGTQTTNVQDVLNGGLQEFMESAL 361 >gi|307296979|ref|ZP_07576795.1| peptide chain release factor 1 [Sphingobium chlorophenolicum L-1] gi|306877505|gb|EFN08733.1| peptide chain release factor 1 [Sphingobium chlorophenolicum L-1] Length = 363 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 114/350 (32%), Positives = 175/350 (50%), Gaps = 17/350 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R + L E L +E ++ E++ + L + Sbjct: 8 IAQIEARRDEVQASMTRADLA--PEEFVRLSKEYAEIEPVARAAHEVRRLRQELSALEYM 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-------QFESLLSGEADSNDAYLEVHAGAGGT 128 A ED + + ++L + L AD+ A LE+ AG GG Sbjct: 66 AGGEDADADPLMREMAQEEMQLIKSRLPDAERALALQLLPKDAADARPAMLEIRAGTGGD 125 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMY R+A+ + +K E + + E G K + G + LK E GVH Sbjct: 126 EAALFAGDLFRMYQRYADAQGWKMELISANASEVGGYKEVVASVTGVGVFAKLKFESGVH 185 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS +++ V P + ++++I++SD +ID YRASGAGGQHVNTTDS Sbjct: 186 RVQRVPVTESGGRIHTSAATVAVLP-EPEEVDVQIADSDLKIDIYRASGAGGQHVNTTDS 244 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+P+G+VV Q ERSQHKNKA+A +LRA++YE+E ++ + + K +G Sbjct: 245 AVRITHLPSGIVVTQQDERSQHKNKAKAMQVLRARIYEVERER--AQSEQAGARKAMVGS 302 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIK 354 G +IR+Y P V D R N+ ++L+G L + + A +A Sbjct: 303 GDRSERIRTYNF-PQGRVTDHRINLTLHRLPEILEGPGLSEVIDALVAED 351 >gi|291320737|ref|YP_003516002.1| peptide chain release factor 1 [Mycoplasma agalactiae] gi|290753073|emb|CBH41049.1| Peptide chain release factor 1 [Mycoplasma agalactiae] Length = 358 Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats. Identities = 113/349 (32%), Positives = 173/349 (49%), Gaps = 6/349 (1%) Query: 11 GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 +F Q L K +DP + N+ E + +E + ++ L D Sbjct: 3 KTMFKSLSEIKQSYLELLKKIDDPEVISNIKEYSAINKEIAKIREISEKFITYENILKDV 62 Query: 70 LILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 + EE+ +N +++ E + L E D + +E+ AG Sbjct: 63 EQAKIMLESKSEEEVEFAKMIIDENSLKLEELEERLKILILPQDENDDKNIIVEIRGAAG 122 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L RMY+++A++ F+ + L + G IKG AY K E G Sbjct: 123 GDEANIFAGDLFRMYSKFADELGFRLKILSTNSASAGGFSQIVFSIKGEKAYSKFKFESG 182 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S R HTS +++ V P +DDS+EIEI SD +ID +R+SGAGGQ VNTT Sbjct: 183 VHRVQRVPVTESQGRIHTSTTTVTVMPEIDDSVEIEIKPSDLKIDVFRSSGAGGQSVNTT 242 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PT +VV Q ERSQ N+ A +L++KLY+LE+QK+ E + Sbjct: 243 DSAVRITHLPTNIVVTSQDERSQIANRETALTILKSKLYDLEMQKKAEEESGYRKLAGHG 302 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + + +++G L + A LA ++ Sbjct: 303 DRSEKIRTYNY-PQDRVTDHRISFSTS-LKPIMEGKLTPIIDALLAEEQ 349 >gi|261749632|ref|YP_003257318.1| peptide chain release factor 2 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497725|gb|ACX84175.1| peptide chain release factor 2 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 367 Score = 203 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 144/349 (41%), Positives = 227/349 (65%), Gaps = 3/349 (0%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +S ++N L + + D + + K + + W+N +AK + + I E+ Sbjct: 10 ISEKINKLQEVLNIDQIKESIEKEEKKISNQNFWKNCKKAKNFTKRLHAMKTCIKNFFEL 69 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 ++ L + IL L+ EED ++ + K + +F++LLS E D +A L++ Sbjct: 70 KNALEELEILFSLSKEEDLEKEVKIQLNKT---KNLLSNIEFKNLLSEEEDIFNAVLQIS 126 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +GAGGTES DW +ML+RMY WAEK KF + + G+ GIKS TL + G A+G+LK Sbjct: 127 SGAGGTESCDWTSMLMRMYIMWAEKNKFSVKNIHHIPGDITGIKSVTLELDGLYAFGYLK 186 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 GE GVHRL+R+SP+D+NS+RHTSFSS++VYP+VD I+I I+ SD + +T+R+SG+GGQ+ Sbjct: 187 GENGVHRLIRLSPFDNNSKRHTSFSSVYVYPLVDKDIDININMSDIQWNTFRSSGSGGQN 246 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VN +S VR+ H PTG++++ + RSQ +N+ +A ++L+++L+E+E+ K+ E N ESS Sbjct: 247 VNKVESGVRLRHHPTGIIIENTETRSQMQNRQKALHLLKSRLFEIEISKKNEKKNKIESS 306 Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K +I WG QIR+Y++ PY++VKDLRT E T V++G++D F+K L Sbjct: 307 KKKIEWGSQIRNYIMHPYKLVKDLRTGYETTQIHSVMNGEIDIFLKKFL 355 >gi|123966944|ref|YP_001012025.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT 9515] gi|229470357|sp|A2BYQ7|RF1_PROM5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|123201310|gb|ABM72918.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT 9515] Length = 364 Score = 203 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 99/348 (28%), Positives = 168/348 (48%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 A + L + DP + N + +++ +ER L+ + ++ D + +L Sbjct: 10 LKTASKSFVNLEMQLADPDIANNPKKLELIAKERAKLEPLVLDFNQLLDTDKEIDDSRQL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130 + + ++ + ++ + + D LE+ AGAGG E+ Sbjct: 70 LKDNRNDKDMELLINEELCNLEVLKNSLIQKVTIALLPKDPRDERSVMLEIRAGAGGNEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY R+ +K + + + + + G K + IKG + Y LK E GVHR+ Sbjct: 130 CIWAGDLARMYERYGQKIGWSVKPISASESDMGGFKELVISIKGDSVYSQLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P D +E++I SD I T R+ GAGGQ+VN ++A+ Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADPVEVKIDPSDLEIGTARSGGAGGQNVNKVETAI 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ V C QERSQ +N+ +A +LRAKLYE++L+ E ++G G Sbjct: 249 DLIHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLK--EANDKERSQRLMQVGTGD 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + D R + +L G LD+ + A +A ++ Sbjct: 307 RSEKIRTYNFKD-NRTTDHRLG-SNFALEPILAGQLDEVIDACIAQEQ 352 >gi|282898121|ref|ZP_06306116.1| Peptide chain release factor 2 [Raphidiopsis brookii D9] gi|281197265|gb|EFA72166.1| Peptide chain release factor 2 [Raphidiopsis brookii D9] Length = 290 Score = 203 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 130/266 (48%), Positives = 182/266 (68%) Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + ++ +++ + + LLSG DS A L ++AGAGGT++QDWA ML+RMYTRWAE Sbjct: 17 ETTINQMHRDLDQWELQQLLSGPYDSQGAVLTINAGAGGTDAQDWAFMLMRMYTRWAEAH 76 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 +K E +G+EAGIKSATL I G AYG+L+ E G HRLVRISP+++N +R TSF+ Sbjct: 77 GYKVTLAEESEGDEAGIKSATLEITGRYAYGYLRAEMGTHRLVRISPFNANGKRQTSFAG 136 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P +D+S+ +EI E D + T RA G GGQ+VN ++AVRI HIPTG+ V+C +ERS Sbjct: 137 VEVMPQIDNSVTLEIPEKDLEVTTSRAGGKGGQNVNKVETAVRIVHIPTGIAVRCTEERS 196 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 Q +NK +A L+AKL + ++R + E WG QIR+YV PYQ+VKDLRT Sbjct: 197 QLQNKEKALARLKAKLLVIAREQRAQEIAEIRGDMVEASWGNQIRNYVFHPYQIVKDLRT 256 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354 N+E T+ DV++GDLD+F++A L + Sbjct: 257 NLETTAIIDVMNGDLDNFIQAYLRQE 282 >gi|284929590|ref|YP_003422112.1| peptide chain release factor 1 [cyanobacterium UCYN-A] gi|284810034|gb|ADB95731.1| bacterial peptide chain release factor 1 (bRF-1) [cyanobacterium UCYN-A] Length = 367 Score = 203 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 97/348 (27%), Positives = 175/348 (50%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + Q + L + DP + N E + + + R L+ ++ ++ + + L ++ Sbjct: 10 LHSVEQTFNELTRRLADPSIATNPNELQKVAKTRSSLEETVNAYEQWKKTEKELLETKQI 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEY-----KQFESLLSGEADSNDAYLEVHAGAGGTES 130 + ++E + + + L D + LE+ AG GG E+ Sbjct: 70 VKDAGGDHEMREMASIEAKELEIKLNNLEELMKILLLPRDPNDDKNIMLEIRAGTGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY+R+AE + + + + GIK L I G + LK E GVHR+ Sbjct: 130 SIWAGDLARMYSRYAESQNWVVKLANESLADMGGIKETILEITGDKVFSKLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ + P D +E++I D + T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPVTEAGGRVHTSTATVAIMP-EVDEVEVKIDAKDIDMSTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ + C +ERSQ +N+ +A +LRAKLYE +L++++E I K+++G G Sbjct: 249 DLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEAKLREQQEE--ISSMRKSQVGTGS 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D R + + S +L+GD+D +++ ++ + Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLG-QNFALSGILEGDIDILIESCISQDQ 352 >gi|282877960|ref|ZP_06286769.1| peptide chain release factor 1 [Prevotella buccalis ATCC 35310] gi|281299961|gb|EFA92321.1| peptide chain release factor 1 [Prevotella buccalis ATCC 35310] Length = 370 Score = 203 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 90/350 (25%), Positives = 153/350 (43%), Gaps = 19/350 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R ++T P + + L +E + L + + K L ++ Sbjct: 11 LEGLEARFEEVSTLITAPDVIADQPRYVKLTKEYKDLGDIMDIRKRYIACLNAIRESKDI 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + LQ + + E D+ + +E+ AG GG E+ Sbjct: 71 LANETDADMKEMAREELQANEDMQPQLEEEIKLALVPKDPEDAKNVQMEIRAGTGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MY + + + + +++G G K + G N YG LK E GVHR+ Sbjct: 131 LFAGDLFNMYKHYCDSKGWTLSVTSVNEGSVGGYKEIDFAVSGDNVYGTLKYESGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P D I+E D + DT+R+SGAGGQ+VN +S VR Sbjct: 191 RVPATETQGRMHTSAATVAVLPEADQFEVN-INEGDIKWDTFRSSGAGGQNVNKVESGVR 249 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + + ++++C + R Q KNK +A + LR +Y+ E QK I +I K Sbjct: 250 LRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLRTFIYDREHQKY--IDDIANRRK 307 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 + + G + IR+Y P V D R ++GD+ + A Sbjct: 308 SLVSTGDRSAKIRTYNY-PQGRVTDHRIGYTTHDLQGFVNGDIQAMIDAL 356 >gi|237750909|ref|ZP_04581389.1| peptide chain release factor 1 [Helicobacter bilis ATCC 43879] gi|229373354|gb|EEO23745.1| peptide chain release factor 1 [Helicobacter bilis ATCC 43879] Length = 356 Score = 203 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 110/345 (31%), Positives = 173/345 (50%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++R L + ++ + L +E+ D ++ KE L D L Sbjct: 6 LKPIIERNDALAAMLSTEEVINDIAKLTALSKEKSESDEIVAKAKEYLKVLDDITSNKAL 65 Query: 76 ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ + +E L+ + + + + D + YLE+ AG GG E+ + Sbjct: 66 LEDKELGELAKEELKELEIAQKNLEDEIKILLIPKDPNDKKNIYLEIRAGTGGDEAGIFV 125 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L Y R+A+ +++K E + + G K L+KG AY LK E G HR+ R+ Sbjct: 126 GDLFSAYCRYADSKQWKVEIISSSENSVGGYKEMIALVKGDGAYSRLKYEGGTHRVQRVP 185 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P VD I+ +D +ID +R+ G GGQ VNTTDSAVRITH Sbjct: 186 KTESQGRIHTSAITVAIMPEVDSLEIN-INPNDLKIDVFRSGGHGGQSVNTTDSAVRITH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+ V Q E+SQHKNK +A +L+A+LYE EL+ + A ES K ++G G + Sbjct: 245 IPTGISVSMQDEKSQHKNKDKALKILQARLYEAELEAQN--AQNRESRKNQVGSGDRSER 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + D R N+ S +++ GDLD + +A + Sbjct: 303 IRTYNY-PQNRMSDHRINLTLYSLEEIMLSGDLDKVIDPLIAHAQ 346 >gi|33866628|ref|NP_898187.1| peptide chain release factor 1 [Synechococcus sp. WH 8102] gi|46576726|sp|Q7U4H2|RF1_SYNPX RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|33633406|emb|CAE08611.1| peptide chain release factor RF-1 [Synechococcus sp. WH 8102] Length = 365 Score = 203 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 102/348 (29%), Positives = 170/348 (48%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72 + A L + DP + + + + RER L+ + +E+ + + L Sbjct: 10 LEAATASFRNLERQLADPDVAADPTRLEKIARERARLEPLVLDFEELQVLEGEQKQSREL 69 Query: 73 LELALEEDDCSI--LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L+ + + + +R E L D LE+ AGAGG E+ Sbjct: 70 LKECRGDAAMEELAQDDLASLNRRHAELTEKLTVALLPRDPRDERSVMLEIRAGAGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY R+++K + + + ++ + G + L +KG + + LK E GVHR+ Sbjct: 130 CIWAGDLARMYERYSQKLGWNVQPISSNEADLGGFRELILSVKGDSVFSQLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P D++E+++ D I T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADAVEVQLDPKDLEISTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H P+G+ V C QERSQ +N+ +A +LRAKL LE ++RE A + ++G G Sbjct: 249 DLLHKPSGIRVFCTQERSQLQNRERALEILRAKL--LEQEQREAAARESSDRRAQVGSGD 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + D R + VLDG L+D + A +A ++ Sbjct: 307 RSEKIRTYNYKD-NRTTDHRLGRNFS-LDPVLDGQLEDLIGACIAEEQ 352 >gi|319957818|ref|YP_004169081.1| bacterial peptide chain release factor 1 (brf-1) [Nitratifractor salsuginis DSM 16511] gi|319420222|gb|ADV47332.1| bacterial peptide chain release factor 1 (bRF-1) [Nitratifractor salsuginis DSM 16511] Length = 355 Score = 203 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 100/341 (29%), Positives = 174/341 (51%), Gaps = 9/341 (2%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 + R +N P + +V + L +E+ + + ++ + + + Sbjct: 10 IDRYEEINRLLSSPEIAADVKKMTELSKEQSSIAPLVEKAQKYLEISEAIEENKAMLSDP 69 Query: 80 DDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 + + +E L+ E + + D + YLE+ AGAGG ES + + Sbjct: 70 EFGELAKEELSELEPQLPRLEEEIKVLMIPKDPNDDKNIYLELRAGAGGDESALFVEDMF 129 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 +MY R+AE++ +K E + +G G K L+KG Y LK E G HR+ R+ ++ Sbjct: 130 KMYLRFAERQGWKVEIVSSSEGTAGGYKELIALVKGEGVYSKLKFEAGTHRVQRVPATET 189 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R HTS ++ V P + +EI+I ++ ++D YR+SG GGQ VNTTDSAVR+TH+PTG Sbjct: 190 QGRVHTSAITVAVIP-EVEDVEIDIKPNEIKMDVYRSSGCGGQSVNTTDSAVRLTHLPTG 248 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315 +VV Q E+SQHKN+ +A +L+A+++E ++++ E K ++G G +IR+Y Sbjct: 249 IVVAIQDEKSQHKNRDKAMKVLKARVHEAMMREQMEE--TAGQRKLQVGSGDRSEKIRTY 306 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 P + D R + + DV+ +G L+ + +A + Sbjct: 307 NY-PQNRITDHRIGLTLYALDDVMNNGTLEQVIDPLIAHAQ 346 >gi|72383384|ref|YP_292739.1| peptide chain release factor 2 [Prochlorococcus marinus str. NATL2A] gi|72003234|gb|AAZ59036.1| bacterial peptide chain release factor 2 (bRF-2) [Prochlorococcus marinus str. NATL2A] Length = 313 Score = 203 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 139/308 (45%), Positives = 198/308 (64%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MR+ + + + + + D + +EL + D IL E + L+++K E+E + E Sbjct: 1 MRQLDEVKAELEKLITWRGAIEDANLSVELYELDPDEEILSEAHNGLEQLKQELERWETE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LLSG D A L ++AGAGGT++QDWA MLLRMYTRWAE K E+ +GEEAGI Sbjct: 61 RLLSGIYDKEGAVLSINAGAGGTDAQDWAQMLLRMYTRWAENNGMKVSINELSEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KS T+ I+G AYG+L+ E+G HRLVRISP+++N +R TSF+ + V P +D+ +E+EI E Sbjct: 121 KSVTIEIEGVYAYGFLQNEKGTHRLVRISPFNANGKRQTSFAGVEVMPKLDEEVELEIPE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D I T R+ GAGGQ+VN ++AVRI H+PTG+ V+C QERSQ +NK +A +L++KL Sbjct: 181 KDLEITTSRSGGAGGQNVNKVETAVRILHVPTGIAVRCTQERSQLQNKDKAMALLKSKLM 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 + +++R E WG QIR+YV PYQMVKDLRT E T V++G +D Sbjct: 241 VIAVEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQMVKDLRTEQETTDVDSVMNGKIDI 300 Query: 346 FMKATLAI 353 F+++ L Sbjct: 301 FIQSLLRQ 308 >gi|186684480|ref|YP_001867676.1| peptide chain release factor 1 [Nostoc punctiforme PCC 73102] gi|238691196|sp|B2ITM5|RF1_NOSP7 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|186466932|gb|ACC82733.1| peptide chain release factor 1 [Nostoc punctiforme PCC 73102] Length = 365 Score = 203 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 106/348 (30%), Positives = 177/348 (50%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + Q + L + DP N E + + + R L+ ++ + + D + E+ Sbjct: 10 LKSVEQTFNELTRRLGDPDTASNPDEYQEIAKSRSSLEEVVNTYEIWKTAQEDLIGAREV 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130 E LQE + + E + L D + LE+ AG GG E+ Sbjct: 70 YKESASDPELQEMASLEVKELEEKIEHLESRLKVLLLPRDPNDEKNIMLEIRAGTGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L++MYTR+A+ + +K + GE G K L IKG + Y LK E GVHR+ Sbjct: 130 SIWAGDLMQMYTRYAQTQGWKVSLVSESRGEMGGWKEVILEIKGNDVYSQLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ + P D +EI I D + T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPATESGGRVHTSTATVAIMP-EVDDVEIHIDPKDIEMTTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ + C +ERSQ +NK +A +LRAKLY+++L +++ A + ++++G G Sbjct: 249 DLMHKPTGIRIFCTEERSQLQNKERAMQILRAKLYDIKLGEQQ--AAVTSMRRSQVGTGS 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + D R + S + VLDGDL+ +++ +++ + Sbjct: 307 RSEKIRTYNYKD-NRATDHRLG-QNYSLTPVLDGDLETLIQSCISLDQ 352 >gi|270308380|ref|YP_003330438.1| peptide chain release factor 1 [Dehalococcoides sp. VS] gi|270154272|gb|ACZ62110.1| peptide chain release factor 1 [Dehalococcoides sp. VS] Length = 355 Score = 203 bits (515), Expect = 4e-50, Method: Composition-based stats. Identities = 100/345 (28%), Positives = 171/345 (49%), Gaps = 7/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +N +R + + P + + + L +ER L + + + + L Sbjct: 5 LENCEKRFREIEEEISKPEVINDARLVRTLAQERADLQTKVEMYRRYKAMSKELEEAKNL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + ++ ++ + E E L D +E+ AG GG E+ Sbjct: 65 LEIEKDEDMRDMVRGEIENLEKSMANLYEQMTLELLPKDPNDDKSIIMEIRAGTGGDEAG 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L +MYTR+A + +KTE ++I+ IK + G A+ LK E+GVHR+ Sbjct: 125 LFAADLYKMYTRYALLKNWKTEVIDINGNVAGIIKEVVFEVNGKGAFSRLKYERGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +++ R HTS +++ V P + ++I+I+ D R+D + +SGAGGQ+V +A+R Sbjct: 185 RVPQTEASGRIHTSTATVAVLP-QAEEVDIDINMDDVRVDIFHSSGAGGQNVQKVATAIR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA-NIGESSKTEIGWGR 310 +THIPTG+VV CQ ERSQ KNK +A+ +LRA+L ELE K +E + + Sbjct: 244 LTHIPTGLVVCCQDERSQLKNKNKAFAVLRARLMELEQSKVDEERTESRRAQVGQADRSE 303 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + + +L+G LD+ + ++ Sbjct: 304 KIRTYNF-PQDRLTDHRIGLTAHNLPHILEGYLDEIIDTLATHEQ 347 >gi|33862085|ref|NP_893646.1| peptide chain release factor 1 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|81575585|sp|Q7UZX1|RF1_PROMP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|33634303|emb|CAE19988.1| peptide chain release factor RF-1 [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 364 Score = 203 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 104/348 (29%), Positives = 171/348 (49%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 NA + L + DP + N + + + RER L+ + ++ D + +L Sbjct: 10 LKNASESFVNLEMQLADPDIANNPKKLESIARERAKLEPLVLDFNQLLDTDKEIGDSKQL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130 E + ++ + +++ + E L D LE+ AGAGG E+ Sbjct: 70 LKENRNDKDMESLINEELFSLEDLKNQLIEKLTIALLPKDPRDERSVMLEIRAGAGGNEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY R+ +K + + + + + G K + +KG + Y LK E GVHR+ Sbjct: 130 CIWAGDLARMYERYGQKIGWTVKPISASESDMGGFKELVISVKGDSVYSQLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P D +E++I ++ I T R+ GAGGQ+VN ++A+ Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADPVEVKIDPTEIEIGTARSGGAGGQNVNKVETAI 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ V C QERSQ +N+ +A +LRAKLYE++L+ E A ++G G Sbjct: 249 DLIHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLK--EANAKERSQRLMQVGSGD 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + D R + +L G LDD + A LA ++ Sbjct: 307 RSEKIRTYNFKD-NRTTDHRLG-SNFALEPILAGQLDDVIYACLAQEQ 352 >gi|237800110|ref|ZP_04588571.1| peptide chain release factor 2 [Pseudomonas syringae pv. oryzae str. 1_6] gi|257487126|ref|ZP_05641167.1| peptide chain release factor 2, programmed frameshift [Pseudomonas syringae pv. tabaci ATCC 11528] gi|320323152|gb|EFW79241.1| peptide chain release factor 2 [Pseudomonas syringae pv. glycinea str. B076] gi|320329576|gb|EFW85565.1| peptide chain release factor 2 [Pseudomonas syringae pv. glycinea str. race 4] gi|330867549|gb|EGH02258.1| peptide chain release factor 2 [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330872776|gb|EGH06925.1| peptide chain release factor 2 [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330878328|gb|EGH12477.1| peptide chain release factor 2 [Pseudomonas syringae pv. glycinea str. race 4] gi|330894559|gb|EGH27220.1| peptide chain release factor 2 [Pseudomonas syringae pv. mori str. 301020] gi|330959166|gb|EGH59426.1| peptide chain release factor 2 [Pseudomonas syringae pv. maculicola str. ES4326] gi|330964102|gb|EGH64362.1| peptide chain release factor 2 [Pseudomonas syringae pv. actinidiae str. M302091] gi|330985076|gb|EGH83179.1| peptide chain release factor 2, programmed frameshift [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009249|gb|EGH89305.1| peptide chain release factor 2 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331022966|gb|EGI03023.1| peptide chain release factor 2 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 248 Score = 203 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 154/247 (62%), Positives = 192/247 (77%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + SGE D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F +E+ GE AGIK Sbjct: 1 MFSGEMDPNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 AT+ IKG A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ S Sbjct: 61 GATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPS 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDTYR+SGAGGQHVNTTDSAVRITH+PT VV CQ ERSQH NK A MLRA+LYE Sbjct: 121 DLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 E+QKR + E +K++IGWG QIRSYVL +KDLRTNIE++ VLDGD+D++ Sbjct: 181 QEVQKRNAASQALEDTKSDIGWGHQIRSYVLD-ASRIKDLRTNIERSDCDKVLDGDIDEY 239 Query: 347 MKATLAI 353 + A+L Sbjct: 240 LIASLKQ 246 >gi|311743960|ref|ZP_07717766.1| peptide chain release factor RF1 [Aeromicrobium marinum DSM 15272] gi|311313090|gb|EFQ83001.1| peptide chain release factor RF1 [Aeromicrobium marinum DSM 15272] Length = 353 Score = 203 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 119/353 (33%), Positives = 178/353 (50%), Gaps = 22/353 (6%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD + V + L K DP + + ++AK + + L I +E Q D Sbjct: 1 MFDAVETLVAEHAELERKMADPSVHADPVQAKRIGQRYAELTAVIRTYREWQQTGDDLQA 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EL +++D + E Q + D+ D LE+ G GG ES Sbjct: 61 ARELRMDDDVVQLEARLP-------ELGERLQRLLVPRDPGDAKDVILEIKGGEGGEESA 113 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGE 184 +A LLRMYTR+AE+R ++ + L+ + G KS T + G LK E Sbjct: 114 LFAADLLRMYTRFAERRGWRVDILDSTESALGGYKSVTAAVKARSTPEPGEAPGALLKFE 173 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ +S R HTS + + V P + +++EI +SD RID YR+SG GGQ VN Sbjct: 174 GGVHRVQRVPVTESQGRIHTSAAGVLVLP-EAEDVDVEIHDSDLRIDVYRSSGPGGQSVN 232 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVRITH+PTGVV CQ E+SQ +NK QA +LRA+L LE + A ++ ++ Sbjct: 233 TTDSAVRITHVPTGVVASCQNEKSQLQNKEQALRILRARL--LEAAQATADAEASDARRS 290 Query: 305 EI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +I ++R+Y P + D RT + + V+DG L+D + + + Sbjct: 291 QIRTVDRSERVRTYNF-PENRISDHRTGFKAYNLDAVMDGGLEDVIGSLVEAD 342 >gi|148555445|ref|YP_001263027.1| peptide chain release factor 1 [Sphingomonas wittichii RW1] gi|166223608|sp|A5V9C3|RF1_SPHWW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|148500635|gb|ABQ68889.1| bacterial peptide chain release factor 1 (bRF-1) [Sphingomonas wittichii RW1] Length = 360 Score = 203 bits (515), Expect = 5e-50, Method: Composition-based stats. Identities = 112/348 (32%), Positives = 171/348 (49%), Gaps = 15/348 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L L + L ++ ++ E++ + +L + Sbjct: 9 IAQIEARRDELQALMARGDLPSDQ--FVQLSKDYAEIEPVAQAAGEVRRLRAELDVLKGM 66 Query: 76 ALEEDDCSI-LQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130 A +E + + + I+ + + + L AD A LE+ AG GG E+ Sbjct: 67 AEDEAGDAELRAMAIEEAEEIRARLPEAERALALKLLPRDAADERSAMLEIRAGTGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+AE R ++ E + + G K + G + LK E GVHR+ Sbjct: 127 ALFAGDLFRMYQRYAEDRGWRVELISASAADLGGYKEVVASVTGAGVFARLKFESGVHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +++ I + D RID YR+SG GGQ VNTTDSAV Sbjct: 187 QRVPVTESGGRIHTSAATVAVLP-EAEEVDVHIDDKDLRIDVYRSSGPGGQSVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+VV Q E+SQHKNKA+A +LR +LYE+E ++ K+ +G G Sbjct: 246 RITHLPTGLVVIQQDEKSQHKNKAKALKVLRTRLYEMERERLASERAGA--RKSMVGSGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIK 354 +IR+Y P V D R N+ S++L+G LDD + A +A Sbjct: 304 RSERIRTYNF-PQGRVTDHRINLTLHRLSEILEGPGLDDLVGALIAED 350 >gi|119484803|ref|ZP_01619285.1| Peptide chain release factor 1 [Lyngbya sp. PCC 8106] gi|119457621|gb|EAW38745.1| Peptide chain release factor 1 [Lyngbya sp. PCC 8106] Length = 368 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 104/352 (29%), Positives = 182/352 (51%), Gaps = 19/352 (5%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + L Q + L + DP + N E + + +ER ++ ++ + + Sbjct: 7 IEKLRSF------EQTFNELTLRLADPDVSNNPTELQRIAKERSSIEEVVNTYQLWKTAQ 60 Query: 67 CDNLILLELALEEDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + ++ E + ++E + +++ + + L S D + LE+ Sbjct: 61 EELTGARQVQKEAGEDPEMKEMAALEVEELQNQLEQLETHLKVLLLPSDPNDDKNIMLEI 120 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG GG E+ WA L+RMY+R+AE +K++ + + + G K A L IKG Y L Sbjct: 121 RAGTGGDEASIWAGDLVRMYSRYAEGQKWQVKIVSESSADMGGFKEAILEIKGDQVYSKL 180 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHR+ R+ ++ R HTS +++ V P D +++EI D + T R+ GAGGQ Sbjct: 181 KFEAGVHRVQRVPLTEAGGRVHTSTATVAVMP-EVDEVDVEIDPKDIEMSTARSGGAGGQ 239 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN ++AV + H PTG+ + C +ERSQ +N+ +A +LRAKLYE++L++++E + Sbjct: 240 NVNKVETAVDLIHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLREQQE--AVTSM 297 Query: 302 SKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 ++++G G +IR+Y + V D R + S S VL+G +DD + A Sbjct: 298 RRSQVGTGARSEKIRTYNYKD-NRVTDHRLG-QNFSLSPVLEGGMDDVVDAC 347 >gi|56552405|ref|YP_163244.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis ZM4] gi|241761553|ref|ZP_04759640.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260753918|ref|YP_003226811.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|81598182|sp|Q5NMC7|RF1_ZYMMO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|56543979|gb|AAV90133.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis ZM4] gi|241373861|gb|EER63394.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258553281|gb|ACV76227.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 358 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 113/346 (32%), Positives = 169/346 (48%), Gaps = 13/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R L + P L + L RE ++ + + + L + Sbjct: 9 LAAIIARREELQAEMARPDL--DSNRLVALSREYSEVEPVALAAENVGRLREEGETLEAM 66 Query: 76 ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 ++D + N + L AD A LE+ AG GG E+ Sbjct: 67 TKDDDPELQAMAVEELEANKTALAEAERALALSLLPRDAADERSAILEIRAGTGGDEAAL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 + LLRMY+R+AE+ ++ E + E G K + I G + LK E GVHR+ R Sbjct: 127 FGGDLLRMYSRYAEEHGWRVEMISASAAELGGYKEVVISITGAGVFARLKFESGVHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS +++ V P + ++++I E D RID +R+SG GGQ VNTTDSAVRI Sbjct: 187 VPVTESGGRIHTSAATVAVLP-EAEEVDVDIDERDLRIDIFRSSGPGGQSVNTTDSAVRI 245 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIP+G+VV Q E+SQHKNKA+A +LRA+LYE E ++ + K+ +G G Sbjct: 246 THIPSGIVVSQQDEKSQHKNKAKAMKVLRARLYERERERL--HSERAGQRKSMVGSGDRS 303 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIK 354 +IR+Y P V D R N+ ++L G LD+ + A +A Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTLHRLPEILAGPGLDEVISALIAED 348 >gi|306835871|ref|ZP_07468866.1| peptide chain release factor RF1 [Corynebacterium accolens ATCC 49726] gi|304568236|gb|EFM43806.1| peptide chain release factor RF1 [Corynebacterium accolens ATCC 49726] Length = 358 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 111/346 (32%), Positives = 176/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ V + + DP + + + L + L I +E+ D E+ Sbjct: 8 VDDIVSEYQGIEMQMGDPEIAGDQQAFRKLSKRYAELRPIIKVNEELTQAREDLADAKEM 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D +E ++ E E DS D +E+ AGAGG E+ +A Sbjct: 68 --AYEDHDFQEEADRLAASVEELEEKLADLLAPRDEQDSEDIIMEIKAGAGGEEAALFAG 125 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190 L RMY R+A+K FK E L +++ + G+K T+ + A+ K E GVHR+ Sbjct: 126 DLARMYERFADKIDFKWEVLGLNESDLGGVKDMTISFRAKSPTRDGAWSVFKFEGGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R TS + + VYP ++ + I + D R+D YR+SG GGQ VNTTDSAV Sbjct: 186 QRVPVTESQGRIQTSAAGVLVYPEPEEVESVNIDDKDIRVDVYRSSGKGGQGVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG++V CQ+ERSQ +NKA+A +L+A+L ++E + RE A +S+ + Sbjct: 246 RITHLPTGLIVTCQKERSQIQNKARALQVLQARLDQMEREAREAEAGEQRASQVRTMDRS 305 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 ++R+Y P + D R + + VL+GD+ D +KA ++ Sbjct: 306 ERVRTYNW-PENRITDHRIGYKANNLDSVLNGDMQDLIKALQDQER 350 >gi|72162818|ref|YP_290475.1| peptide chain release factor 1 [Thermobifida fusca YX] gi|119361632|sp|Q47M70|RF1_THEFY RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|71916550|gb|AAZ56452.1| bacterial peptide chain release factor 1 (bRF-1) [Thermobifida fusca YX] Length = 355 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 119/349 (34%), Positives = 174/349 (49%), Gaps = 12/349 (3%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D+ + L + DP + + +A+ L + L ++ +E+ D Sbjct: 1 MKLDDLLGEYYELEQQLADPAVHADQAQARTLAKRYSQLTPIVATYRELNRVESDIETAQ 60 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 EL +D S E + + V+ + + D D LEV AG GG ES + Sbjct: 61 EL--AAEDPSFADEAKQLAAQREELVQRLRTLLIPRDPNDDKDVILEVKAGEGGEESALF 118 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-------YGWLKGEQG 186 A+ L+RMY R+AE++ +KTE + + G K T+ IK + LK E G Sbjct: 119 ASDLVRMYLRYAERQGWKTEIISATHSDLGGYKDITIAIKNRGTVEPGQGVWHRLKFEGG 178 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S R HTS + V P + IE+EI+ESD RID YR+SG GGQ VNTT Sbjct: 179 VHRVQRVPVTESQGRIHTSAVGVLVLP-EAEEIEVEINESDLRIDVYRSSGPGGQSVNTT 237 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE- 305 DSAVRITH+PTG+VV CQ E+SQ +NK QA +LRA+L E A S+ Sbjct: 238 DSAVRITHLPTGIVVSCQNEKSQLQNKEQALRVLRARLLAEAQAAAEAEAAAERRSQVRT 297 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + ++R+Y P + D R + + VLDG+LD ++A + Sbjct: 298 VDRSERVRTYNF-PENRISDHRVGYKAYNLDQVLDGELDGVIQALVDAD 345 >gi|126658019|ref|ZP_01729171.1| peptide chain release factor 1 [Cyanothece sp. CCY0110] gi|126620657|gb|EAZ91374.1| peptide chain release factor 1 [Cyanothece sp. CCY0110] Length = 369 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 99/348 (28%), Positives = 179/348 (51%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + Q L + DP + N E + + + R L+ ++ K Q+ + ++ Sbjct: 10 LQSVEQTYQELTRRLADPDIATNPDELQRVAKARSSLEETVNTYKTWQETQEELKGAKQI 69 Query: 76 ALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E ++E + ++++ E + L D + LE+ AG GG E+ Sbjct: 70 VKEAGGDPEMREMAAMEVSELEEQLQQLEEQLKILLLPRDPNDDKNIMLEIRAGTGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L+RMY+R+AE +K+ + + + G K A L I G Y LK E GVHR+ Sbjct: 130 SIWAGDLVRMYSRYAESQKWNVKLVSESLADMGGFKEAILEITGDQVYSKLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ + P D +EI+I D + T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPVTEAGGRVHTSTATVAIMP-EVDEVEIQIDPKDIEMTTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ + C +ERSQ +N+ +A +LRAKLYE +L++++E + ++++G G Sbjct: 249 DLMHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEAKLREQQE--AVSSMRRSQVGTGS 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D R + + + L+G++D+ ++ ++ + Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLG-QNFALAGALEGNIDNIIETCISQDQ 352 >gi|22297692|ref|NP_680939.1| peptide chain release factor 1 [Thermosynechococcus elongatus BP-1] gi|32171539|sp|Q8DMG9|RF1_THEEB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|22293869|dbj|BAC07701.1| peptide chain release factor 1 [Thermosynechococcus elongatus BP-1] Length = 364 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 110/348 (31%), Positives = 181/348 (52%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 Q + L + DP + N E + + R R L+ ++ E Q + +L Sbjct: 10 LRTVEQTFTELTRRLADPDVAVNPTEFQKVARSRAALEETVNAYHEWQSLNQQLVDARQL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130 E + L++ ++ + + L D + LE+ AGAGG E+ Sbjct: 70 HKEAANEPELRQMAEEEIAHLSHRIAQLEERLKILLLPRDPNDEKNIMLEIRAGAGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L+RMY+R+A+ + ++ + E G K A L IKG Y LK E GVHR+ Sbjct: 130 GIWAGDLVRMYSRYAKTQGWQVTLVSESLAEMGGFKEAILEIKGDRVYSKLKYESGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +++ R HTS +++ V P D +E+EI D + T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPATEASGRIHTSTATVAVMP-EVDEVEVEIDPKDIELTTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ + C +ERSQ KNK +A+ +LRAKLYE++L++++E I ++++G G Sbjct: 249 DLYHKPTGIRIFCTEERSQLKNKERAFQILRAKLYEIKLREQQE--AITSMRRSQVGTGD 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D R + S S VL+GDL+ ++A ++ + Sbjct: 307 RSEKIRTYNYKD-DRVTDHRLG-QNFSLSSVLEGDLEPIIQACISRDQ 352 >gi|319406093|emb|CBI79723.1| peptide chain release factor 1 [Bartonella sp. AR 15-3] Length = 359 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 118/348 (33%), Positives = 180/348 (51%), Gaps = 18/348 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +R + ++ + P N L E L I I+ + + + + Sbjct: 10 KQLEKRFKIIESQMAENP----NAETYVKLASEYAELQPIIVSIRALNSLCKEITDIETI 65 Query: 76 ALEEDDCSILQETSDN-----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + ++ + Q+I+ + Q L AD +E+ AG GG+E+ Sbjct: 66 ISDTQTDTEMRNLAQEELSSLYQKIQELEQELQILLLPKDIADEKSVIIEIRAGTGGSEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A +K E + + DGE G K I G + LK E GVHR+ Sbjct: 126 ALFAGDLFRMYERYANTHNWKVEVISLSDGEVGGYKEIIATISGKGVFSKLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 RI ++ R HTS +++ V P + I+IEI D RIDT RASGAGGQHVNTTDSAV Sbjct: 186 QRIPETETGGRIHTSAATVAVLP-EAEEIDIEICPEDIRIDTMRASGAGGQHVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG++V Q E+SQH+N+A+A +LRA+L+++E QK + S KT++G G Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQK--AESERSASRKTQVGSGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ +++GDL++ + A ++ + Sbjct: 302 RSERIRTYNF-PQGRVTDHRINMTLYKLDRIMEGDLNELINALISDHQ 348 >gi|170742857|ref|YP_001771512.1| peptide chain release factor 1 [Methylobacterium sp. 4-46] gi|226739116|sp|B0UAV4|RF1_METS4 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|168197131|gb|ACA19078.1| peptide chain release factor 1 [Methylobacterium sp. 4-46] Length = 359 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 110/347 (31%), Positives = 172/347 (49%), Gaps = 13/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + R + + L RE LD+ ++ I+ + + + + Sbjct: 9 LDAILARHDIVTATLSAGE--ADSESFVQLSRELSDLDDVVAAIRAYRAAEAELRGVEAM 66 Query: 76 ALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E D + + Q L AD A LE+ AG GG E+ Sbjct: 67 LQEGDPEMRALAAEEKPEVEAARDAAAKALQIMLLPKDAADEKSAILEIRAGTGGDEAAL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A LLRMY R+A+ + +K E + G G + +KG + LK E G HR+ R Sbjct: 127 FAGDLLRMYARYADLKGWKIEVVSESPGTMGGYREVVAEVKGRGVFARLKFESGAHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ V P + ++I ++E+D +IDT RA GAGGQHVN T+SA+RI Sbjct: 187 VPETETQGRIHTSAATVAVLP-EAEEVDIHVNEADLKIDTMRAQGAGGQHVNKTESAIRI 245 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIP+G+VV Q+ERSQHKN+A+A +LRA+LY E ++ ++ A + ++G G Sbjct: 246 THIPSGIVVFVQEERSQHKNRARAMAVLRARLY--EQERSQKDAARAADRRAQVGSGDRS 303 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIKK 355 +IR+Y P V D R N+ +VL G LD+ + A + + Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTLYKLEEVLAGTALDELVDALVTEHQ 349 >gi|284050702|ref|ZP_06380912.1| peptide chain release factor 1 [Arthrospira platensis str. Paraca] gi|291567816|dbj|BAI90088.1| peptide chain release factor 1 [Arthrospira platensis NIES-39] Length = 371 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 101/351 (28%), Positives = 174/351 (49%), Gaps = 16/351 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + Q L + DP + + E + + + R L++ ++ +E + + ++ Sbjct: 10 LKSVEQTFQELTLRLADPEIATDPDEFQRVAKTRSSLEDVVNAYQEWKTTQTELAGAKQI 69 Query: 76 --------ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L+E E + +++ + L D + LE+ AG GG Sbjct: 70 LRETGNDPELKEMKEMAALEVEELTTKLQELETRLKILLLPQDPNDDKNIMLEIRAGTGG 129 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ WA L+RMY+R+AE + ++ L + G K A L I+G Y LK E GV Sbjct: 130 DEASIWAGDLVRMYSRYAETKGWRVRLLSESLADMGGFKEAILEIQGDRVYSQLKFEAGV 189 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS +++ + P D +E++I D + T R+ GAGGQ+VN + Sbjct: 190 HRVQRVPVTEAGGRVHTSTATVAIMP-EVDDVEVQIDAKDIEMTTARSGGAGGQNVNKVE 248 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 +AV + H PTG+ V C +ERSQ KN+ +A +LRAKLYE +L RE+ + ++++G Sbjct: 249 TAVDLFHKPTGIRVFCTEERSQLKNRERAMQILRAKLYEAKL--REQQDAVTSMRRSQVG 306 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y + V D R + + VL+G + D ++A + + Sbjct: 307 TGSRSEKIRTYNYKD-NRVTDHRLGHNFS-LAPVLEGGIGDLIQACVIQDQ 355 >gi|188995108|ref|YP_001929360.1| putative peptide chain release factor RF-2 [Porphyromonas gingivalis ATCC 33277] gi|188594788|dbj|BAG33763.1| putative peptide chain release factor RF-2 [Porphyromonas gingivalis ATCC 33277] Length = 319 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 129/315 (40%), Positives = 197/315 (62%), Gaps = 11/315 (3%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MR+ + L + I + I + + E + S +E + +E + + Sbjct: 1 MRKVKELKSWIGYYDAIDTATEEVKLAYEYCK--EGISTEEEVDEAYAHAIRLIEEVELK 58 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++L E D A L+V+AGAGGTESQDWA+ML+RMY RWA+K+ ++ DG+EAGI Sbjct: 59 NMLRSEEDHFGAVLKVNAGAGGTESQDWASMLVRMYQRWADKQGYQVTITNWQDGDEAGI 118 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ T+ ++G AYG+LK E GVHRLVR+SPY++ +R TSF+S++V P+VDDSIEIEI+ Sbjct: 119 KTVTMQVEGNLAYGFLKSENGVHRLVRVSPYNAQGKRMTSFASVFVVPLVDDSIEIEINA 178 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAW 277 + DT+R+ GAGGQ+VN ++ VR+ + +V++ + R+Q+ N+ A Sbjct: 179 AGISWDTFRSGGAGGQNVNKVETGVRLHYKYKDPETGEDKEIVIENTESRTQYDNRENAM 238 Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 +LR++LYE+ELQ+R E+ K +I WG QIRSYV + VKD RTN + ++ + Sbjct: 239 RLLRSQLYEMELQRRRAAEAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSNVNA 297 Query: 338 VLDGDLDDFMKATLA 352 V+DGD+D+F+KA L Sbjct: 298 VMDGDIDEFIKAYLM 312 >gi|222087303|ref|YP_002545840.1| peptide chain release factor 1 [Agrobacterium radiobacter K84] gi|254790855|sp|B9JB75|RF1_AGRRK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|221724751|gb|ACM27907.1| peptide chain release factor 1 [Agrobacterium radiobacter K84] Length = 359 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 111/344 (32%), Positives = 174/344 (50%), Gaps = 18/344 (5%) Query: 18 NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 +R + + P L E L ++ I++ + + + L + Sbjct: 11 ELERRFGEIEARMSAGPA----ADVYVKLASEYSELQPVVAKIRDYEKAIAEASDLEAML 66 Query: 77 LEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ++ +++ +D E + Q L AD A LE+ AG GG+E+ Sbjct: 67 ADKSVDREMRDLADMELPEVKERIEVLEQDIQILLLPKDAADEKSAILEIRAGTGGSEAA 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + L RMY R+A +K E L DGE G K I G + LK E GVHR+ Sbjct: 127 LFGGDLFRMYERFAANNGWKVEILSASDGEAGGYKEVIATITGKGVFSRLKFESGVHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P + I+IEI D RIDT R+SGAGGQHVNTTDSAVR Sbjct: 187 RVPETEAGGRIHTSAATVAVLP-EAEEIDIEIRAEDIRIDTMRSSGAGGQHVNTTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+P+G+VV E+SQH+N+A+A +LR++L+++E Q+ + K+++G G Sbjct: 246 ITHLPSGIVVTSS-EKSQHQNRAKAMQVLRSRLFDMERQR--ADSERSADRKSQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ +++G++D+ + A A Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIDEVVDALRA 345 >gi|227501694|ref|ZP_03931743.1| peptide chain release factor 1 [Corynebacterium accolens ATCC 49725] gi|227077719|gb|EEI15682.1| peptide chain release factor 1 [Corynebacterium accolens ATCC 49725] Length = 352 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 111/346 (32%), Positives = 176/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ V + + DP + + + L + L I +E+ D E+ Sbjct: 2 VDDIVSEYQGIEMQMGDPEIAGDQQAFRKLSKRYAELRPIIKVNEELTQAREDLADAKEM 61 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D +E ++ E E DS D +E+ AGAGG E+ +A Sbjct: 62 --AYEDHDFQEEADRLAASVEELEEKLADLLAPRDEQDSEDIIMEIKAGAGGEEAALFAG 119 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190 L RMY R+A+K FK E L +++ + G+K T+ + A+ K E GVHR+ Sbjct: 120 DLARMYERFADKIDFKWEVLGLNESDLGGVKDMTISFRAKSPTRDGAWSVFKFEGGVHRV 179 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R TS + + VYP ++ + I + D R+D YR+SG GGQ VNTTDSAV Sbjct: 180 QRVPVTESQGRIQTSAAGVLVYPEPEEVESVNIDDKDIRVDVYRSSGKGGQGVNTTDSAV 239 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG++V CQ+ERSQ +NKA+A +L+A+L ++E + RE A +S+ + Sbjct: 240 RITHLPTGLIVTCQKERSQIQNKARALQVLQARLDQMEREAREAEAGEQRASQVRTMDRS 299 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 ++R+Y P + D R + + VL+GD+ D +KA ++ Sbjct: 300 ERVRTYNW-PENRITDHRIGYKANNLDSVLNGDMQDLIKALQDQER 344 >gi|283768251|ref|ZP_06341164.1| peptide chain release factor 1 [Bulleidia extructa W1219] gi|283105128|gb|EFC06499.1| peptide chain release factor 1 [Bulleidia extructa W1219] Length = 358 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 10/338 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 QR + D ++ N L +E+ L A+ +++ E+ E D Sbjct: 13 QRYQTITNDLMDEKVFSNPALLTKLSKEQASLTQAVEAWHKLKALDERIEQANEMMKESD 72 Query: 81 ---DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 E + L + +E+ Q + D +D +E+ GAGG E +A L Sbjct: 73 VELKEIAKMELEECLPVQEELLEHIQHLLIPKDPDDDHDVIMEIRGGAGGDEGNIFAGDL 132 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMYTR+AE + +K + +E E G IKG Y LK E GVHR+ R+ + Sbjct: 133 YRMYTRYAESKGWKVQVMETSISEAGGFSQVIFSIKGNEVYRDLKWESGVHRVQRVPKTE 192 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 S R HTS +++ P +++ I +D I+T+RASGAGGQH+N TDSAVRI H+PT Sbjct: 193 SQGRVHTSTATVLCQPEAEEADIE-IDPADLTIETHRASGAGGQHINKTDSAVRIVHVPT 251 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314 G+ V CQ+ RSQ +N+ A ++RA++YE ++R+E A G + + +IG G +IR+ Sbjct: 252 GITVNCQEGRSQIENRETAMRLIRARVYEEIKRQRDEEA--GAARRAKIGTGDRSEKIRT 309 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 Y P V D R + T +++G LD + A Sbjct: 310 YNY-PQNRVTDHRIGLTITQLDRIMEGKLDGIIAGLQA 346 >gi|308235424|ref|ZP_07666161.1| peptide chain release factor 1 [Gardnerella vaginalis ATCC 14018] gi|311114831|ref|YP_003986052.1| peptide chain release factor RF1 [Gardnerella vaginalis ATCC 14019] gi|310946325|gb|ADP39029.1| peptide chain release factor RF1 [Gardnerella vaginalis ATCC 14019] Length = 365 Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats. Identities = 105/345 (30%), Positives = 166/345 (48%), Gaps = 16/345 (4%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + + +P + N + L R L + +S + D + E+A E++ Sbjct: 17 NEYRDIENRMGEPEVASNPDAIRKLGRRHAELGSIVSAYLNYKQLCEDYEVANEMASEDE 76 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D + + + E + D+ D +E+ AG GG E+ +A LLRM Sbjct: 77 DLAKEAKQLEEQIPAAKEKLRTAL--IPRDPDDARDMIMEIKAGTGGEEAALFAGDLLRM 134 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193 Y R+AEKR + T + E G+K L I + +K E GVHR+ RI Sbjct: 135 YMRYAEKRGWTTVIQSENSTELGGVKDVQLAIRAKGTPAPEDGVWASMKYEGGVHRVQRI 194 Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 +S R TS + + V+P +D EIEI D +ID + +SG GGQ VNTT SAVR+ Sbjct: 195 PVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRM 254 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309 THIPTG+VV Q E+SQ +N+A A +L+++L L ++ +E A + +++ Sbjct: 255 THIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLDRS 312 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RTN + + VL+GDL + + + Sbjct: 313 ERIRTYNF-PENRIVDHRTNYKAYNLDQVLNGDLQPVIDSDIQAD 356 >gi|17231677|ref|NP_488225.1| peptide chain release factor 1 [Nostoc sp. PCC 7120] gi|20139331|sp|Q8YPK9|RF1_ANASP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|17133320|dbj|BAB75884.1| translation releasing factor RF-1 [Nostoc sp. PCC 7120] Length = 366 Score = 202 bits (513), Expect = 7e-50, Method: Composition-based stats. Identities = 100/348 (28%), Positives = 177/348 (50%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + Q + L + DP +N E + + + R L+ + + + + ++ Sbjct: 10 LKSVEQTFNELTRRLGDPDTAKNPDEYQKIAKSRSSLEEVVETYDNWKIAQEELIGARQV 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130 E + + E + + E + L D + LE+ AG GG E+ Sbjct: 70 LKEANSDPDMHEMAALEVKELEEKIDYLETRLKVLLLPRDPNDDKNIMLEIRAGTGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA LLRMY+R+A+ + ++ + + GE G K L I+G + Y LK E GVHR+ Sbjct: 130 SIWAGDLLRMYSRYADTQGWRVKLVSESLGEMGGFKEVILEIQGESVYSKLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ + P D +EI I D + T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPATEAGGRVHTSTATVAIMP-EVDEVEIHIDPKDIEMTTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ + C +ERSQ +NK +A +LRAKLYE++L++++E + ++++G G Sbjct: 249 DLMHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQQEE--VTSMRRSQVGTGS 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + D R + S + VL+GDL+ +++ ++ + Sbjct: 307 RSEKIRTYNYKD-SRATDHRLG-QNFSLNPVLEGDLETVIQSCISQDQ 352 >gi|317125570|ref|YP_004099682.1| bacterial peptide chain release factor 1 (bRF-1) [Intrasporangium calvum DSM 43043] gi|315589658|gb|ADU48955.1| bacterial peptide chain release factor 1 (bRF-1) [Intrasporangium calvum DSM 43043] Length = 359 Score = 202 bits (513), Expect = 7e-50, Method: Composition-based stats. Identities = 110/352 (31%), Positives = 170/352 (48%), Gaps = 14/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + + + + L + DP + + + L + L ++ + Q D Sbjct: 1 MLESVQAILDEYADLEARLADPAVHADQDLVRTLNKRYAALGPTVASARAWQTARDDVEA 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EL E+ + + + E +Q D D LEV AG GG ES Sbjct: 61 ARELGAEDAAFAAEVPALEGVLAETEEHLLRQLVP--RDPDDDRDVILEVKAGEGGEESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG--------PNAYGWLKG 183 +A LLRMY R+AE+R ++T + + + G K + I+ + LK Sbjct: 119 LFAGDLLRMYLRYAERRGWRTVVEDATESDLGGYKDVRVSIRSRGHQPGPGEAPWARLKY 178 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHR+ R+ +S R HTS + + V P + +E+ I D RID YR+SG GGQ V Sbjct: 179 EGGVHRVQRVPVTESQGRVHTSAAGVLVMP-EAEEVEVTIDPHDLRIDVYRSSGPGGQSV 237 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSAVRITH+PTG+VV CQ E+SQ +NK A +LRA+L++L + + A+ S+ Sbjct: 238 NTTDSAVRITHLPTGLVVSCQNEKSQLQNKEAALRVLRARLHQLAKDEADAEASAARRSQ 297 Query: 304 TE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +IR+Y P + D RT + + V+DGDLD +++ + Sbjct: 298 VRTVDRSERIRTYNF-PENRISDHRTGYKSYNLDHVIDGDLDPVVQSAIDAD 348 >gi|168036672|ref|XP_001770830.1| predicted protein [Physcomitrella patens subsp. patens] gi|162677889|gb|EDQ64354.1| predicted protein [Physcomitrella patens subsp. patens] Length = 376 Score = 202 bits (513), Expect = 7e-50, Method: Composition-based stats. Identities = 104/348 (29%), Positives = 187/348 (53%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72 D+A + L+ + DP + N E + + + L+ + ++ +L D + Sbjct: 18 LDSAERTYKELSMRLADPDVANNNNEYQKIAKSLAELEEIYQTYQRFKECEAQLDDAKEM 77 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD--SNDAYLEVHAGAGGTES 130 + A + + + + N+ ++E +Q + +L S + LEV AG GG E+ Sbjct: 78 AKDAAGDREMAEMAAEEANILAQQVEELEEQLKVMLLPSDPLDSRNIMLEVRAGTGGDEA 137 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L+RMY +++E+ ++ + + E+ G K L I G Y LK E GVHR+ Sbjct: 138 GIWAGDLVRMYQKFSERNNWRCSPVSCTEAEKGGYKEFVLEITGERVYSKLKYESGVHRV 197 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ + P D +E+ I D + T R+ GAGGQ+VN ++A+ Sbjct: 198 QRVPATESQGRVHTSTATVAIMP-EVDEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 256 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ + C +ERSQ KNK +A+ +LRAKLYE++L++++E I + ++++G G Sbjct: 257 DLFHKPTGIRIFCTEERSQLKNKIRAFQLLRAKLYEIKLREQQET--IRNARQSQVGTGA 314 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D RT I + VL+G+L+ +++ A+++ Sbjct: 315 RSEKIRTYNYKD-NRVSDHRTKI-NFDLTTVLNGELEGPVQSCAALEQ 360 >gi|189218443|ref|YP_001939084.1| protein chain release factor A [Methylacidiphilum infernorum V4] gi|189185301|gb|ACD82486.1| Protein chain release factor A [Methylacidiphilum infernorum V4] Length = 377 Score = 202 bits (513), Expect = 7e-50, Method: Composition-based stats. Identities = 105/347 (30%), Positives = 173/347 (49%), Gaps = 12/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++ L T+ L+ + + + +E L + E++ + L Sbjct: 7 IEKIQKKFDKLQTELSKEELYTDPSKTIEIAKEHTRLKETLDLYGELKQIENAKSSVESL 66 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQF-----ESLLSGEADSNDAYLEVHAGAGGTES 130 A E D I + + R+ +++ S + +E+ AG GG E+ Sbjct: 67 AKETVDPEIQELAQQEITRLSNKIQELTMAILGSLFPPEENKSSKNVIIEIRAGTGGEEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY+++AEK+ +K E L + E G+K ++G A+ +K E GVHR+ Sbjct: 127 ALFAADLYRMYSKYAEKKGWKQELLHFNPSELGGLKEVIFTVQGKEAFRKMKFESGVHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V + +E++I D RI+ RASG GGQ VNTTDSAV Sbjct: 187 QRVPATESQGRIHTSTATVAVLL-ETEEVELDIKAEDLRIEVCRASGPGGQGVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 ++ HIP+G++V+CQ ERSQ KNK +A +L+A+L L ++ EE + K+ IG G Sbjct: 246 QVFHIPSGIMVRCQDERSQIKNKEKALKILKARL--LARKQEEEAQKRAQERKSMIGSGE 303 Query: 311 Q---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + IR+Y P V D R I + +DGD+D + + + Sbjct: 304 RTEKIRTYNF-PQGRVTDHRIPITLYNLQSFMDGDIDPIVDQLMQKE 349 >gi|110680314|ref|YP_683321.1| peptide chain release factor 1 [Roseobacter denitrificans OCh 114] gi|119361597|sp|Q164F8|RF1_ROSDO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|109456430|gb|ABG32635.1| peptide chain release factor 1 [Roseobacter denitrificans OCh 114] Length = 351 Score = 202 bits (513), Expect = 8e-50, Method: Composition-based stats. Identities = 115/315 (36%), Positives = 168/315 (53%), Gaps = 9/315 (2%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK-LEVEYKQ 103 L +E L + I Q L D E+ + D + +E L+ Q Sbjct: 33 LAKEYSDLRPVVEQISAYQQLLSDLEDAAEMLGDPDMAPLAEEEIPRLKSALPQAEAALQ 92 Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163 L +AD+ A LE+ G GG E+ +A L RMY R+AE + +K + +E+ + E Sbjct: 93 LALLPKDKADAKPAMLEIRPGTGGDEAALFAGDLFRMYQRYAETQGWKVDLIELQETELG 152 Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 GIK IKG + + LK E GVHR+ R+ +S R HTS +++ V P + ++I I Sbjct: 153 GIKEVVAHIKGADVFARLKYESGVHRVQRVPSTESGGRIHTSAATVAVLP-EAEDVDIHI 211 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +D RIDT R+SGAGGQHVNTTDSAVRITH+PTG+VV E+SQH+N+ A +L+A+ Sbjct: 212 DANDLRIDTMRSSGAGGQHVNTTDSAVRITHLPTGLVVTSS-EKSQHRNREIAMQVLKAR 270 Query: 284 LYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 LY+LE + ++ ++G G +IR+Y P + D R N+ VL Sbjct: 271 LYDLERSRVDDER--SADRAAQVGSGDRSERIRTYNF-PQGRMTDHRINLTLYRLDAVLQ 327 Query: 341 GDLDDFMKATLAIKK 355 GDLD+ + A A + Sbjct: 328 GDLDEIIDALTAHAQ 342 >gi|284992528|ref|YP_003411082.1| peptide chain release factor 1 [Geodermatophilus obscurus DSM 43160] gi|284065773|gb|ADB76711.1| peptide chain release factor 1 [Geodermatophilus obscurus DSM 43160] Length = 363 Score = 202 bits (513), Expect = 8e-50, Method: Composition-based stats. Identities = 105/342 (30%), Positives = 160/342 (46%), Gaps = 8/342 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L T+ DP + + A+ L R L + + + D EL Sbjct: 16 LSGLLAEHAALETELADPAVHADASRARRLGRRYAQLAPLVETKRALDAVRDDLAAAREL 75 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A E+ + + E + D D LE+ AG GG ES +A Sbjct: 76 ADEDASFAAEAAALEQRVPELEERLRSLL--VPEDPDDDKDVILEIKAGEGGAESALFAG 133 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK---GPNAYGWLKGEQGVHRLVR 192 LLRMY R+AE+R + TE L+ + G K + +K + LK E GVHR+ R Sbjct: 134 DLLRMYLRYAERRGWATEVLDAVPADLGGYKDVAIAVKSRSDEGIWSRLKFEGGVHRVQR 193 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS + V P + +++ + +D RID +R+SG GGQ VNTTDSAVRI Sbjct: 194 VPVTESQGRIHTSAVGVLVLP-EAEEVDVTVDPNDLRIDVFRSSGPGGQSVNTTDSAVRI 252 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311 TH+PTG+VV Q E+SQ +N+ A +LR++L + A+ S+ + + Sbjct: 253 THLPTGIVVSSQNEKSQLQNRESALRVLRSRLLAAARDEAAAAASDQRRSQVRTVDRSER 312 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +R+Y P + D R + + VLDG+LD + A Sbjct: 313 VRTYNF-PESRISDHRVGFKAHNLDQVLDGELDPVIDALTRA 353 >gi|78188007|ref|YP_378345.1| peptide chain release factor 2 [Chlorobium chlorochromatii CaD3] gi|78170206|gb|ABB27302.1| bacterial peptide chain release factor 2 (bRF-2) [Chlorobium chlorochromatii CaD3] Length = 312 Score = 202 bits (513), Expect = 8e-50, Method: Composition-based stats. Identities = 138/308 (44%), Positives = 204/308 (66%), Gaps = 1/308 (0%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 ++E L + ++ + +++ALE D S E ++ + ++ + +F Sbjct: 2 LKELADLKSWTDEYDKLSAKARYCQDEMDIALELQDESFGDELTNTITELEQAIAAIEFR 61 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++LSG+ D+ +A + +HAGAGGTE+QDWA ML RMY RWAE++ FKT + +G+ AGI Sbjct: 62 NMLSGKDDAGNAMVTIHAGAGGTEAQDWAEMLYRMYMRWAERKGFKTFTDDYQEGDGAGI 121 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ATL I+G AYG+LK E GVHRLVR+SP+D+N+RRHTSF+S++ YP +EIE+ + Sbjct: 122 KTATLEIQGAYAYGYLKAENGVHRLVRVSPFDANARRHTSFASVYTYPEAPPDVEIEVRK 181 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D + T+R+ G GGQ+VN ++AVRI H+PTG+VV CQ+ERSQ +N+ +A ML A+LY Sbjct: 182 EDLELSTFRSGGKGGQNVNKVETAVRIKHLPTGIVVGCQEERSQLQNRERAMKMLMAQLY 241 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 + + ++ + E K +I WG QIRSYVL + +KD RTN E+ VLDGDLDD Sbjct: 242 QRQREEEDAKKREIEGKKKKIEWGSQIRSYVLDD-RRIKDHRTNYERFDIETVLDGDLDD 300 Query: 346 FMKATLAI 353 FM+ L+ Sbjct: 301 FMEKYLSQ 308 >gi|254412235|ref|ZP_05026010.1| peptide chain release factor 1 [Microcoleus chthonoplastes PCC 7420] gi|196181201|gb|EDX76190.1| peptide chain release factor 1 [Microcoleus chthonoplastes PCC 7420] Length = 371 Score = 202 bits (513), Expect = 8e-50, Method: Composition-based stats. Identities = 98/348 (28%), Positives = 180/348 (51%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + Q L + DP + + +E + + + R L+ + + + + ++ Sbjct: 10 LQSVEQTFHELTRRLADPDIATDPVEVQRVAKARSSLEEVVITYELWKTAQEELTGARQI 69 Query: 76 ALEEDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + + E + +++ + + L D + LE+ AG GG E+ Sbjct: 70 LKEANGDGEMHEMASLEVEELQTKLEELEKRLKILLLPRDPNDDKNIMLEIRAGTGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L+RMY+R+AE + ++ + L + G K A L I+G Y LK E GVHR+ Sbjct: 130 SIWAGDLVRMYSRYAETQNWRVKLLSESPADMGGFKEAILEIQGEQVYSKLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P D +EIE+ D + T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPVTEAGGRVHTSTATVAVMP-EVDDVEIEVDPKDLEVSTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ + C +ERSQ +N+ +A +LRAKLYE++L++++E + ++++G G Sbjct: 249 DLFHKPTGIRIFCTEERSQLQNRERALQILRAKLYEMKLREQQE--AVTSMRRSQVGTGS 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D R + + S + +L+GD++ ++A + + Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLS-QNYSLNSLLEGDIESVIQACITQDQ 352 >gi|157828568|ref|YP_001494810.1| peptide chain release factor 1 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933282|ref|YP_001650071.1| peptide chain release factor 1 [Rickettsia rickettsii str. Iowa] gi|166223598|sp|A8GSC7|RF1_RICRS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189039987|sp|B0BXT9|RF1_RICRO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|157801049|gb|ABV76302.1| peptide chain release factor 1 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908369|gb|ABY72665.1| bacterial peptide chain release factor 1 (RF-1) [Rickettsia rickettsii str. Iowa] Length = 355 Score = 202 bits (513), Expect = 8e-50, Method: Composition-based stats. Identities = 124/347 (35%), Positives = 187/347 (53%), Gaps = 16/347 (4%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + + + L K + + E +E L++ ++ IKE + Sbjct: 6 NLAKILDKYENLGNKLSS-GIMGD--EFVKASKEYAELEDVVAKIKEYNKAKSELEEANN 62 Query: 75 LALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LE + E ++ + L +ADS A +EV AG+GG E Sbjct: 63 FKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGGEE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A +L MY R+AE + ++ E L I D G K A+ IKG + + LK E GVHR Sbjct: 123 AALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS +++ V P + ++I+I + D RIDTYRASGAGGQHVNTTDSA Sbjct: 183 VQRVPETESQGRIHTSAATVAVLP-EAEEVDIKIEDKDLRIDTYRASGAGGQHVNTTDSA 241 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG+ V Q E+SQHKNKA+A +LRA++YE E +K+E+ +S + ++G G Sbjct: 242 VRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQAR--ADSRRGQVGSG 299 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352 +IR+Y P V D R ++ +V+ +G LD+F++A +A Sbjct: 300 DRSERIRTYNF-PQGRVSDHRIHLTLYKIDEVVKNGQLDEFVEALIA 345 >gi|183602493|ref|ZP_02963858.1| peptide chain release factor 1 [Bifidobacterium animalis subsp. lactis HN019] gi|219683536|ref|YP_002469919.1| peptide chain release factor 1 [Bifidobacterium animalis subsp. lactis AD011] gi|241190567|ref|YP_002967961.1| peptide chain release factor 1 [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195973|ref|YP_002969528.1| peptide chain release factor 1 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|254790862|sp|B8DTL4|RF1_BIFA0 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|183218134|gb|EDT88780.1| peptide chain release factor 1 [Bifidobacterium animalis subsp. lactis HN019] gi|219621186|gb|ACL29343.1| peptide chain release factor 1 [Bifidobacterium animalis subsp. lactis AD011] gi|240248959|gb|ACS45899.1| peptide chain release factor 1 [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250527|gb|ACS47466.1| peptide chain release factor 1 [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295793554|gb|ADG33089.1| peptide chain release factor 1 [Bifidobacterium animalis subsp. lactis V9] Length = 365 Score = 202 bits (513), Expect = 8e-50, Method: Composition-based stats. Identities = 105/345 (30%), Positives = 166/345 (48%), Gaps = 16/345 (4%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + + + + +W N + + L R + L ++ + + D E+ + Sbjct: 14 EEYENIERQMGEQEVWSNPDKMRKLGRRQAQLGTIVNAYRTWLNIRNDLDAAQEM--AGE 71 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 D QE + E + + D+ D +E+ AGAGG E+ +A LLRM Sbjct: 72 DPDFAQEAKRLESELPEAEEKLRTALIPRDPDDARDVIMEIKAGAGGEEAALFAGDLLRM 131 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193 Y R+AEKR + + E G+K + I + LK E GVHR+ RI Sbjct: 132 YMRYAEKRGWGVTIQSENSTELGGVKDVQMAIRAKGNPSPEEGVWASLKYEGGVHRVQRI 191 Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 +S R TS + + V+P +D EIEI D +ID + +SG GGQ VNTT SAVR+ Sbjct: 192 PVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRM 251 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309 THIPTG+VV Q E+SQ +N+A A +L+++L L ++ +E A + +++ Sbjct: 252 THIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLDRS 309 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RTN + + VLDGDL + + + Sbjct: 310 ERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 353 >gi|167644945|ref|YP_001682608.1| peptide chain release factor 1 [Caulobacter sp. K31] gi|167347375|gb|ABZ70110.1| peptide chain release factor 1 [Caulobacter sp. K31] Length = 334 Score = 202 bits (513), Expect = 8e-50, Method: Composition-based stats. Identities = 111/323 (34%), Positives = 173/323 (53%), Gaps = 10/323 (3%) Query: 38 NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKL 97 + E L +E L ++ + + L E+ + + +++ + L Sbjct: 6 DGAEIVKLSKEHAELRPVAEAVQALAKLAAERADLEEMTADPEMAAMVSDEIQALDEKLP 65 Query: 98 -EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 + ++ A LEV AG GG E+ +A L RMY R+A+ + +K E Sbjct: 66 VMERELALMLAPRDKDENASAILEVRAGTGGDEAALFAGDLFRMYQRYAQLQGWKVEVDS 125 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 + +GE G K + G +G K E GVHR+ R+ ++ R HTS +++ V P Sbjct: 126 VSEGEMGGYKEIIASVTGDGVFGRWKFESGVHRVQRVPATEAQGRIHTSAATVAVLP-EA 184 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + +EIEI+++D RIDTYR+SGAGGQHVN TDSAVRITH+PTGVVV E+SQH+N+A+A Sbjct: 185 EDVEIEINDADIRIDTYRSSGAGGQHVNKTDSAVRITHLPTGVVVTSS-EKSQHQNRARA 243 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 L+A+LY+L Q+ ++ K+++G G +IR+Y P V D R N+ Sbjct: 244 MKNLKARLYDL--QRTALDTARSDARKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTVY 300 Query: 334 SPSDVLDGD-LDDFMKATLAIKK 355 + V++GD LDD +K +A + Sbjct: 301 NLPKVMEGDALDDIIKPLIAEDQ 323 >gi|317486373|ref|ZP_07945201.1| peptide chain release factor 2 [Bilophila wadsworthia 3_1_6] gi|316922362|gb|EFV43620.1| peptide chain release factor 2 [Bilophila wadsworthia 3_1_6] Length = 329 Score = 202 bits (513), Expect = 8e-50, Method: Composition-based stats. Identities = 152/319 (47%), Positives = 198/319 (62%), Gaps = 10/319 (3%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLEL----------ALEEDDCSILQETSDNLQRI 95 +RE+ L+ + + +++ L E+ D L+ S ++R+ Sbjct: 2 LREKSRLEAELDRLDTLKNCHASMLDWQEMAQELSGGAEIKEGGDAAEALESLSAEIERL 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 +E + LLS E D DA LE+H GAGGTE+QDWA ML RMY RWA+ F E L Sbjct: 62 TELLEETETNLLLSSEEDHADAILEIHPGAGGTEAQDWAQMLQRMYLRWADSHGFSVEEL 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 + G+EAGIKS +L I G N YG+LKGE+G+HRL+RISP+DS+ RRHTSF+S+ V P Sbjct: 122 DFLPGDEAGIKSVSLRISGENVYGFLKGERGIHRLIRISPFDSSGRRHTSFASVDVIPDA 181 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 D IEIEI ESD R+D + ASG GGQ VNTT SAVRITHIP+G+ VQCQ ERSQH NK Sbjct: 182 GDDIEIEIKESDLRVDIFCASGPGGQGVNTTYSAVRITHIPSGISVQCQNERSQHHNKDS 241 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A +LR +LY+LEL KR+ + K I +G QIR+Y LQPY++VKD R N E Sbjct: 242 AMRILRGRLYDLELSKRDAARQAEYAGKNAISFGSQIRTYTLQPYRLVKDHRNNCEIGDT 301 Query: 336 SDVLDGDLDDFMKATLAIK 354 VLDG +D ++ L + Sbjct: 302 DAVLDGRIDKLLRDYLLWQ 320 >gi|269219853|ref|ZP_06163707.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 848 str. F0332] gi|269210758|gb|EEZ77098.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 848 str. F0332] Length = 365 Score = 202 bits (513), Expect = 8e-50, Method: Composition-based stats. Identities = 108/349 (30%), Positives = 166/349 (47%), Gaps = 12/349 (3%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 + + + T+ P + + K L R L + + + D E+ Sbjct: 9 EQVLAEHRKIETEMSSPEALSSPEKMKSLGRRYAELGRVVRVYQAYRRAEADLSETREIV 68 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTESQDWA 134 + + L + + L DA +EV AG GG ES +A Sbjct: 69 EAGGEDAELFRPELPGLQEAYAQAEAALKDALIPRDPDDARDAIVEVKAGEGGEESALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI--------KGPNAYGWLKGEQG 186 LLRMY R+AE+ ++T+ L E G K L + + LK E G Sbjct: 129 GDLLRMYERYAERMGWQTQILSSVPTELGGFKDVQLAVRLRSAPEDPADGVWAHLKFEAG 188 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S R HTS + + V+ VDD E+EI+++D R+D +R+SG GGQ VNTT Sbjct: 189 VHRVQRVPVTESQGRLHTSAAGVLVFAEVDDPGEVEIADADIRVDVFRSSGPGGQSVNTT 248 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE- 305 DSAVRITHIPTG+VV CQ E+SQ KN+ A +LRA+L +++L+++ E S+ Sbjct: 249 DSAVRITHIPTGLVVSCQDEKSQIKNREAAMRVLRARLRQMQLEQQAEENAAMRRSQVRT 308 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +IR+Y P + D RT + + VL G+L + + + Sbjct: 309 VDRSERIRTYNF-PENRISDHRTGYKAYNLDQVLAGNLGPLVDSAREMD 356 >gi|260577564|ref|ZP_05845503.1| peptide chain release factor 1 [Corynebacterium jeikeium ATCC 43734] gi|258604288|gb|EEW17526.1| peptide chain release factor 1 [Corynebacterium jeikeium ATCC 43734] Length = 358 Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats. Identities = 111/346 (32%), Positives = 177/346 (51%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ + L + DP L + A+ + + L I ++++ D+ E+ Sbjct: 8 IDDILAEYQGLEMQLSDPELHNDPAAARKVGKRFSELQPIIQTHQKLEQAREDHEAASEM 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A E+ + + + + E D +D +E+ +GAGG E+ +A Sbjct: 68 AAEDKEFAEEAKRLEEEIGELEEQLTDLL--APRDPHDGDDIVMEIKSGAGGEEAALFAG 125 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-----YGWLKGEQGVHRL 190 L RMY R+AE+ F TE L +++ + G+K TL I+ + K E GVHR+ Sbjct: 126 ELARMYQRYAERHGFSTEILGLNETDLGGVKDMTLSIRSKQPSRDGAWSEFKFEGGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 RI +S R TS + + VYP D+ ++ I + D R+D YR+SG GGQ VNTTDSAV Sbjct: 186 QRIPVTESQGRIQTSAAGVLVYPEPDEVEDVHIDDKDIRVDVYRSSGKGGQGVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PT +VV CQ+ERSQ +N+A+A +L A+L +L+ ++ E A G +++ + Sbjct: 246 RITHLPTNIVVTCQKERSQIQNRARAMQVLAARLQQLKEEEAEAEAAEGRAAQIRTMDRS 305 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + + VLDGDL+ + A + Sbjct: 306 ERIRTYNF-PESRVSDHRIGYKANNLDSVLDGDLEALLAALKEADR 350 >gi|72382938|ref|YP_292293.1| peptide chain release factor 1 [Prochlorococcus marinus str. NATL2A] gi|119361577|sp|Q46IT8|RF1_PROMT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|72002788|gb|AAZ58590.1| bacterial peptide chain release factor 1 (bRF-1) [Prochlorococcus marinus str. NATL2A] Length = 365 Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats. Identities = 102/348 (29%), Positives = 170/348 (48%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + A L + DP + + + + + RER L+ ++ ++Q + L L Sbjct: 10 LETAKSSFQNLELQLADPDVASDPKQLETIARERSRLEPLVNDYLKLQIIEKECLEAKGL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130 E D ++ + + + + + L D LE+ AGAGG E+ Sbjct: 70 VKESRDDKEMELLAREELQNLELSKNELIQKLTLALLPKDPRDERSVMLEIRAGAGGNEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY R+ +K + + + + + G + + +KG + Y LK E GVHR+ Sbjct: 130 CLWAGDLARMYERYGQKLGWNVKPISSTEADMGGFREMIISVKGESVYSQLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P D +E++I +D I T R+ GAGGQ+VN ++A+ Sbjct: 190 QRVPSTESQGRVHTSTATVAVMP-EADPVEVKIESTDLEISTARSGGAGGQNVNKVETAI 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H P+G+ V C QERSQ +N+ +A +LRAKL ELEL E A + +++G G Sbjct: 249 DLFHKPSGIRVFCTQERSQMQNRERAMEILRAKLLELELA--EANAKERSARLSQVGTGD 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + D R + VL G L+D + A +A ++ Sbjct: 307 RSEKIRTYNYKD-NRTTDHRLGVNFP-LEQVLSGQLEDVIGACIAEEQ 352 >gi|32475815|ref|NP_868809.1| peptide chain release factor 1 [Rhodopirellula baltica SH 1] gi|81659907|sp|Q7ULT3|RF1_RHOBA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|32446358|emb|CAD76186.1| peptide chain release factor 1 [Rhodopirellula baltica SH 1] gi|327538345|gb|EGF25018.1| peptide chain release factor 1 [Rhodopirellula baltica WH47] Length = 360 Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats. Identities = 107/347 (30%), Positives = 172/347 (49%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + R L DP + + RE L+ + + + + + + Sbjct: 9 LEEKLARFEKLENDMSDPEVLSDGARMSATAREHGGLNRLANQYRTFKRLTDEIHQCVAM 68 Query: 76 ALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQ 131 + +D + ++ K + L+ + + +E+ AG GG E+ Sbjct: 69 VADAEDVDEREMAESEMESLRKERETVWEDLLSLTVGGEDSHRTRCVMEIRAGTGGDEAA 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MYTR+AEK +KTE ++ E G K TL ++G N + L+ E G HR+ Sbjct: 129 LFARDLFEMYTRYAEKVGWKTELMDASPTEMGGFKDVTLTLEGDNVFRDLQYESGGHRVQ 188 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P + +EI++ D R D + ASG GGQHVN TDSAVR Sbjct: 189 RVPETETQGRVHTSAATVAVMP-EPEDVEIDLKPDDYRKDFFGASGPGGQHVNKTDSAVR 247 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +TH TG+VVQCQ E+SQHKN A+A +L+A++Y E ++ EE A E+ K IG G + Sbjct: 248 LTHHETGIVVQCQDEKSQHKNLAKALRVLKARIY--EKKREEEAAKQAEARKGLIGSGDR 305 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R N+ ++ GDL+ +A + + Sbjct: 306 SQRIRTYNF-PQNRLTDHRINLTIYKLDQIIAGDLNPVTEALIEYDR 351 >gi|68536431|ref|YP_251136.1| peptide chain release factor 1 [Corynebacterium jeikeium K411] gi|119361528|sp|Q4JUI9|RF1_CORJK RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|68264030|emb|CAI37518.1| peptide chain release factor RF-1 [Corynebacterium jeikeium K411] Length = 358 Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats. Identities = 111/346 (32%), Positives = 176/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ + L + DP L + A+ + + L I ++++ D E+ Sbjct: 8 IDDILAEYQGLEMQLSDPELHNDPAAARKVGKRFSELQPIIQTHQKLEQAREDQEAASEM 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A E+ + + + + E D +D +E+ +GAGG E+ +A Sbjct: 68 ASEDKEFAEEAKRLEEEISELEEQLTDLL--APRDPHDGDDIVMEIKSGAGGEEAALFAG 125 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-----YGWLKGEQGVHRL 190 L RMY R+AE+ F TE L +++ + G+K TL I+ + K E GVHR+ Sbjct: 126 ELARMYQRYAERHGFSTEILGLNETDLGGVKDMTLSIRSKQPSRDGAWSEFKFEGGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 RI +S R TS + + VYP D+ ++ I + D R+D YR+SG GGQ VNTTDSAV Sbjct: 186 QRIPVTESQGRIQTSAAGVLVYPEPDEVEDVHIDDKDIRVDVYRSSGKGGQGVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PT +VV CQ+ERSQ +N+A+A +L A+L +L+ ++ E A G +++ + Sbjct: 246 RITHLPTNIVVTCQKERSQIQNRARAMQVLAARLQQLKEEEAEAEAAEGRAAQIRTMDRS 305 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + + VLDGDL+ + A + Sbjct: 306 ERIRTYNF-PESRVSDHRIGYKANNLDSVLDGDLEALLAALKEADR 350 >gi|209551100|ref|YP_002283017.1| peptide chain release factor 1 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|238054472|sp|B5ZRR4|RF1_RHILW RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|209536856|gb|ACI56791.1| peptide chain release factor 1 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 359 Score = 201 bits (512), Expect = 9e-50, Method: Composition-based stats. Identities = 109/344 (31%), Positives = 179/344 (52%), Gaps = 18/344 (5%) Query: 18 NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 +R + + P L E L ++ I+ + + + L L Sbjct: 11 ELERRFGEIEARMSAGPA----ADVYVKLASEYSELQPVVTKIRAYEKAIAELADLETLL 66 Query: 77 LEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ++ +++ ++ ++I+ + Q L AD A LE+ AG GG+E+ Sbjct: 67 EDKSVDREMRDLAELELPEVKEQIEALEQEMQILLLPKDAADEKSAILEIRAGTGGSEAA 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R++ ++ +K E L +GE G K I G + LK E GVHR+ Sbjct: 127 LFAGDLFRMYERFSAEKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P + I+IEI D RIDT R+SGAGGQHVNTTDSAVR Sbjct: 187 RVPETEAGGRIHTSAATVAVLP-EAEEIDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+P+G+VV E+SQH+N+A+A +LR++LY+ E Q+ + K+++G G Sbjct: 246 ITHLPSGIVVTSS-EKSQHQNRAKAMQVLRSRLYDAERQR--ADSERSADRKSQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P + D R N+ +++G++++ + A +A Sbjct: 303 SERIRTYNF-PQGRITDHRINLTLYKLDRMMEGEIEEVVDALMA 345 >gi|288956982|ref|YP_003447323.1| peptide chain release factor RF-1 [Azospirillum sp. B510] gi|288909290|dbj|BAI70779.1| peptide chain release factor RF-1 [Azospirillum sp. B510] Length = 361 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 115/352 (32%), Positives = 172/352 (48%), Gaps = 19/352 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72 +D + R L + L +E L + I E++ D + Sbjct: 7 FDKVMARYDELRDTLAAG--LAESGDFARLSKEYADLTPIAAAIAELKRGRAEAADLAEM 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESL------LSGEADSNDAYLEVHAGAG 126 + + + + + L + E EAD +A LEV AG G Sbjct: 65 IAAMMGDSGADPEMRSMAEEEFHLLTKRIPELERKVQISLLPKDEADEKNAILEVRAGTG 124 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L MY R+A ++ EA+++ + G K AT I G + LK E G Sbjct: 125 GDEAALFAAELFEMYRRYAGLHGWRFEAMDVSETGIGGYKEATANITGRGVFAKLKFESG 184 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ ++ R HTS +++ V P + ++I I E D RID +R+SG GGQ VNTT Sbjct: 185 VHRVQRVPATEAQGRIHTSAATVAVLP-EAEEVDIHIDEKDLRIDVFRSSGPGGQSVNTT 243 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PTG+VV Q E+SQHKNKA+A +LRA+LY+ E +++ A K ++ Sbjct: 244 DSAVRITHLPTGLVVSQQDEKSQHKNKAKALKVLRARLYDRERAEKD--AARAADRKNQV 301 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354 G G +IR+Y P V D R N+ V+ G+ LD+ + A +A Sbjct: 302 GSGDRSERIRTYNF-PQGRVTDHRINLTLYKIDKVMAGEALDELVDALVAED 352 >gi|154149107|ref|YP_001407141.1| peptide chain release factor 1 [Campylobacter hominis ATCC BAA-381] gi|166223542|sp|A7I3Q0|RF1_CAMHC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|153805116|gb|ABS52123.1| peptide chain release factor 1 [Campylobacter hominis ATCC BAA-381] Length = 355 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 113/340 (33%), Positives = 178/340 (52%), Gaps = 9/340 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 +R ++ DP + ++ L +E++ ++ + + + L + L + + Sbjct: 11 KRYDEISESLSDPKILSDISLVTKLSKEQRSIEPVRNATLQYLEVLKNIEDNKSLINDTE 70 Query: 81 DCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139 + +E NL+ + E + + D + +LE+ AG GG E+ +A LL Sbjct: 71 LGDLAKEELKNLEISQNKLEEEIKILLIPKDPNDEKNIFLEIRAGTGGDEAALFAGDLLD 130 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 Y R+AE R +KTE + +G G K LL+KG AY LK E G HR+ R+ +S Sbjct: 131 AYLRYAELRGYKTEIVSQSEGSAGGFKEVILLVKGDGAYSRLKFEGGTHRVQRVPETESQ 190 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS ++ + P ++DS I+E+D RID RASG GGQ VNTTDSAVRITHIPTG+ Sbjct: 191 GRVHTSAITVAIMPEIEDSEIQ-INENDLRIDVMRASGHGGQCVNTTDSAVRITHIPTGL 249 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYV 316 VV Q +SQHKNK A +L+A+LY+L+ ++R+ K ++G G +IR+Y Sbjct: 250 VVTNQDGKSQHKNKEAAMKVLKARLYDLQEKERKAKEQ--SERKDQVGTGDRSGRIRTYN 307 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLAIKK 355 P + D R N+ ++ G L D+ + +A + Sbjct: 308 Y-PQNRITDHRINLTLYRLDAIMAGGLFDEIIDPLIAHAQ 346 >gi|302842492|ref|XP_002952789.1| hypothetical protein VOLCADRAFT_105686 [Volvox carteri f. nagariensis] gi|300261829|gb|EFJ46039.1| hypothetical protein VOLCADRAFT_105686 [Volvox carteri f. nagariensis] Length = 415 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 103/342 (30%), Positives = 177/342 (51%), Gaps = 14/342 (4%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 L K DP + N E + + + L+ ++ + +D E E Sbjct: 65 FKELQMKMADPEVAANSTEFQKVAKAAADLEETVNAYRTYKDTEKQLSDASEYLKNEAAD 124 Query: 83 SILQETSDNLQRIKLE------VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 + +LE + + + + D + LE+ AGAGG E+ WA Sbjct: 125 DPEMAEFARAEIAELEVSLAQLQDKLRLQLVPKDPLDDRNIMLEIRAGAGGDEASIWAGD 184 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 ++RMY R+A ++ +K + GE G K L I G + Y LK E GVHR+ R+ Sbjct: 185 MMRMYQRYANRQGWKASLVSCTQGESGGYKEVILEISGTSVYSKLKWEAGVHRVQRVPAT 244 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 ++ R HTS +++ V P + ++++I+ S+ + RASGAGGQ+VN ++AV + H P Sbjct: 245 EAAGRVHTSTATVAVMP-EVEDVDVQINPSEIEVKFARASGAGGQNVNKVETAVDLMHKP 303 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG+ V CQ+ER+Q +NK +A+ +LRAKLYE+E+Q+++ I + K+++G G +I+ Sbjct: 304 TGIRVFCQEERTQAQNKERAFQILRAKLYEMEIQRQQAE--IYAARKSQVGTGDRSEKIK 361 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +Y + V D R + + VL+GDL+D ++A ++ + Sbjct: 362 TYNYKD-SRVSDHRIK-QNFDLNSVLEGDLEDSLQAMISADQ 401 >gi|168705097|ref|ZP_02737374.1| peptide chain release factor 1 [Gemmata obscuriglobus UQM 2246] Length = 358 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 94/340 (27%), Positives = 157/340 (46%), Gaps = 10/340 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + R + L + DP + + ++A + +ER L + E + + Sbjct: 5 LEPQLARYAELEQQLYDPAIAGDPVKAGAIGKERGALAKIVEPYIEYKRLCRAIADAEVM 64 Query: 76 ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 A + D + E +L+ + + + LL D + +E+ AG GG E+ +A Sbjct: 65 AADPDLKDMADEELADLRPKRDALHARIEEKLLLDPSEDFSKLIIEIRAGTGGDEAALFA 124 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L MYTR+A ++ +K E + GE G K + G + Y L+ E G HR+ R+ Sbjct: 125 GNLYEMYTRYAREKGWKIEEIASSPGEAGGFKEVAFGVTGDDVYQLLRYESGGHRVQRVP 184 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS +++ V P +++ +D + RA GAGGQHVN T+SAVRI + Sbjct: 185 ATETQGRIHTSAATVAVLPEPEEAQVEINEANDIEWERMRAGGAGGQHVNKTESAVRIWY 244 Query: 255 I---PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR- 310 P + V+CQ RSQ KN QA +LR++L+E + ++ K +IG G Sbjct: 245 KKGTPDEMEVKCQDGRSQGKNYEQAMRILRSRLFERQQERI--HRERASMRKEQIGSGDR 302 Query: 311 --QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 +IR+Y P D R ++ G LD ++ Sbjct: 303 NARIRTYNF-PQNRCTDHRIEFTVYKLDAIMAGALDQMIQ 341 >gi|172038958|ref|YP_001805459.1| peptide chain release factor 1 [Cyanothece sp. ATCC 51142] gi|171700412|gb|ACB53393.1| peptide chain release factor 1 [Cyanothece sp. ATCC 51142] Length = 375 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 99/348 (28%), Positives = 179/348 (51%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + Q L + DP + N E + + + R L+ ++ K Q+ + ++ Sbjct: 16 LQSVEQTYQELTRRLADPDIATNPDELQRVAKARSSLEETVNTYKTWQETQEELKGAKQI 75 Query: 76 ALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E ++E + ++++ E + L D + LE+ AG GG E+ Sbjct: 76 VKEAGGDPEMREMAAMEVSELEEKLEQLEERLKILLLPRDPNDDKNIMLEIRAGTGGDEA 135 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L+RMY+R+AE +K+ + + + G K A L I G Y LK E GVHR+ Sbjct: 136 SIWAGDLVRMYSRYAESQKWNVKLVSESLADMGGFKEAILEITGDQVYSKLKFEAGVHRV 195 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ + P D +EI+I D + T R+ GAGGQ+VN ++AV Sbjct: 196 QRVPVTEAGGRVHTSTATVAIMP-EVDEVEIQIDPKDIEMTTARSGGAGGQNVNKVETAV 254 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ + C +ERSQ +N+ +A +LRAKLYE +L++++E + ++++G G Sbjct: 255 DLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEAKLREQQE--AVSSMRRSQVGTGS 312 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D R + + + L+G++D+ ++ ++ + Sbjct: 313 RSEKIRTYNYKD-NRVTDHRLG-QNFALAGALEGNIDNIIETCISQDQ 358 >gi|329848654|ref|ZP_08263682.1| peptide chain release factor 1 [Asticcacaulis biprosthecum C19] gi|328843717|gb|EGF93286.1| peptide chain release factor 1 [Asticcacaulis biprosthecum C19] Length = 358 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 107/346 (30%), Positives = 173/346 (50%), Gaps = 14/346 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + R + + E + E L +E + ++ + L E+ Sbjct: 9 LDQVMDRFRMIEARMES---TTDGAEIVRLSKEHAEIKPVCDAVERLLKARNQVPELEEM 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYLEVHAGAGGTESQD 132 D + + + ++ + ++ A LE+ AG GG E+ Sbjct: 66 IALGDPDLAPLAEEELGALKESLPDLERGVALLLAPKDKDENASAILELRAGTGGDEAAL 125 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+A + +K E + +GE G K + G +G LK E GVHR+ R Sbjct: 126 FAGDLFRMYSRYAAAQGWKVEVDSLSEGEAGGFKEIIASVTGEGVFGKLKFESGVHRVQR 185 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ V P + +EIEI + D RIDTYR+SGAGGQHVN TDSAVRI Sbjct: 186 VPATEAGGRIHTSAATVAVLP-EAEDVEIEIHDKDLRIDTYRSSGAGGQHVNKTDSAVRI 244 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV E+SQH+N+A A L+A++Y+ +Q++ +S K+++G G Sbjct: 245 THLPTGIVVTSS-EKSQHQNRAIAMRNLKARMYD--MQRQALDTARSDSRKSQVGSGDRS 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ + ++GD+ + A +A + Sbjct: 302 ERIRTYNY-PQGRVSDHRINLTLYNLPQFMEGDMGQMINALIAEDQ 346 >gi|150021273|ref|YP_001306627.1| peptide chain release factor 1 [Thermosipho melanesiensis BI429] gi|149793794|gb|ABR31242.1| peptide chain release factor 1 [Thermosipho melanesiensis BI429] Length = 358 Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats. Identities = 128/333 (38%), Positives = 179/333 (53%), Gaps = 14/333 (4%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 L FL K E K + + + K+ + +EL EE Sbjct: 18 LKFLEEKLSSQLT---PEEIKKYSEKYSKMKEIVELSKKYLEL----EEEIELWKEEMPE 70 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 E + + ++ L E + +LE+ AG GG E+ +A LLRMY Sbjct: 71 GFENEIEKLSDQQRKIMQELITLVLPKNEYSGKNVFLEIRAGTGGEEAALFAADLLRMYL 130 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 R+ EK+ FK E ++ + + G K + IKG N LK E GVHR+ R+ +S R Sbjct: 131 RYVEKKNFKAEIVDENKTDLGGYKEVVVRIKGKNVGNLLKYESGVHRVQRVPTTESGGRI 190 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTS +++ V P ++EIEI+ SD RIDTYRASGAGGQ+VN T+SAVRITHIPTG+VV Sbjct: 191 HTSTATVAVLP-EVSNVEIEINPSDIRIDTYRASGAGGQYVNKTESAVRITHIPTGIVVT 249 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQP 319 CQ ERSQ +NK QA N+LRA+LY+L+L+ E+ I + K++IG G + IR+Y P Sbjct: 250 CQSERSQLQNKEQAMNILRARLYKLKLE--EQAKKISSNRKSQIGTGERSEKIRTYNF-P 306 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 V D R N + VLDG+LD+F+ + Sbjct: 307 QNRVTDHRINYTSYNLQAVLDGELDEFITRLMR 339 >gi|315453082|ref|YP_004073352.1| peptide chain release factor 1 [Helicobacter felis ATCC 49179] gi|315132134|emb|CBY82762.1| peptide chain release factor 1 [Helicobacter felis ATCC 49179] Length = 349 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 107/345 (31%), Positives = 174/345 (50%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 VQR + P + ++ + L +E+ L+ K L L Sbjct: 6 LQAIVQRYDAIAHSLTQPEVLGDIKQLTELSKEQAGLEELAQVAKTYLQTLEGIQENKSL 65 Query: 76 ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ +E + E + + D+ + YLE+ AG GG E+ + Sbjct: 66 LEDKELGELAKEELKVLEEEKLSLEERIKILLIPKDPNDNKNIYLELRAGTGGDEAGIFV 125 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L + Y R+A+ +K+K E + + G K LIKG Y LK E G HR+ R+ Sbjct: 126 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEMIALIKGQGVYSRLKFEAGTHRVQRVP 185 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P D +E+ I+ +D RI+ +RA G GGQ VNTTDSAVRITH Sbjct: 186 ETESQGRIHTSAVTVAIMP-EVDDVEVNINPNDLRIEVFRAGGHGGQCVNTTDSAVRITH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+ V Q E+SQHKN+ +A +L+A+LYE +++++++ ES K ++G G + Sbjct: 245 IPTGISVSMQDEKSQHKNRDKALKILKARLYEKQIEEQQQAN--SESRKMQVGSGDRSER 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + D R N+ S +++ G+LD ++ +A + Sbjct: 303 IRTYNY-PQNRLSDHRINLTLYSLEEIMLSGNLDPVIEPLIAHAQ 346 >gi|256833004|ref|YP_003161731.1| peptide chain release factor 1 [Jonesia denitrificans DSM 20603] gi|256686535|gb|ACV09428.1| peptide chain release factor 1 [Jonesia denitrificans DSM 20603] Length = 361 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 108/344 (31%), Positives = 170/344 (49%), Gaps = 11/344 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + + + + D + + A+ L R L +S + + D ++ Sbjct: 8 VEPLLGEYADIEAQLSDASVHSDQARARQLGRRYAELGQVVSAYRAWRSATDDLDAARDM 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A E+ + ++ E + + DS D LE+ AG GG ES +A Sbjct: 68 AEEDPSFAEEIPAMEHAAAEASERLRRVL--IPRDPDDSRDVILEIKAGEGGAESALFAA 125 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVH 188 LLRMY R+AE++ ++TE + + + G K + + + LK E GVH Sbjct: 126 DLLRMYLRYAERQGWRTEIIGATESDLGGYKDVQVAVKARGQVTPEEGVWAHLKYEGGVH 185 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS + V+P V+D E+EI ++D RID YR+SG GGQ VNTTDS Sbjct: 186 RVQRVPVTESQGRIHTSAVGVLVFPEVEDEGELEIDQNDLRIDVYRSSGPGGQSVNTTDS 245 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307 AVRITHIPTG+VV Q E+SQ +N+ QA +LRA+L ++ A S+ + Sbjct: 246 AVRITHIPTGIVVSMQNEKSQLQNREQAMRVLRARLLAARQEEAAAAAQDMRRSQVRTVD 305 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P + D RT + + VLDGD+ +++ + Sbjct: 306 RSERIRTYNF-PENRIADHRTGFKSYNLDQVLDGDVQPVVQSAI 348 >gi|160885362|ref|ZP_02066365.1| hypothetical protein BACOVA_03361 [Bacteroides ovatus ATCC 8483] gi|237716574|ref|ZP_04547055.1| peptide chain release factor RF-2 [Bacteroides sp. D1] gi|237720319|ref|ZP_04550800.1| peptide chain release factor RF-2 [Bacteroides sp. 2_2_4] gi|260172304|ref|ZP_05758716.1| peptide chain release factor RF-2 [Bacteroides sp. D2] gi|262405351|ref|ZP_06081901.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|293370547|ref|ZP_06617099.1| putative peptide chain release factor 2 [Bacteroides ovatus SD CMC 3f] gi|294644599|ref|ZP_06722352.1| putative peptide chain release factor 2 [Bacteroides ovatus SD CC 2a] gi|294810341|ref|ZP_06769002.1| putative peptide chain release factor 2 [Bacteroides xylanisolvens SD CC 1b] gi|315920609|ref|ZP_07916849.1| conserved hypothetical protein [Bacteroides sp. D2] gi|156108984|gb|EDO10729.1| hypothetical protein BACOVA_03361 [Bacteroides ovatus ATCC 8483] gi|229442557|gb|EEO48348.1| peptide chain release factor RF-2 [Bacteroides sp. D1] gi|229450070|gb|EEO55861.1| peptide chain release factor RF-2 [Bacteroides sp. 2_2_4] gi|262356226|gb|EEZ05316.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292634281|gb|EFF52818.1| putative peptide chain release factor 2 [Bacteroides ovatus SD CMC 3f] gi|292640036|gb|EFF58301.1| putative peptide chain release factor 2 [Bacteroides ovatus SD CC 2a] gi|294442449|gb|EFG11255.1| putative peptide chain release factor 2 [Bacteroides xylanisolvens SD CC 1b] gi|295086344|emb|CBK67867.1| bacterial peptide chain release factor 2 (bRF-2) [Bacteroides xylanisolvens XB1A] gi|313694484|gb|EFS31319.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 319 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 123/315 (39%), Positives = 188/315 (59%), Gaps = 11/315 (3%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ + L I E++ + + + ++ ++ + VE + + Sbjct: 1 MKLVKDLQKWIEGYNELKTLADELELAFDFYK--EELVTEEDVDAAYAKASEAVEALELK 58 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++L EAD D L++++GAGGTESQDWA+ML+RMY R+AE +K + +G+EAGI Sbjct: 59 NMLRDEADQMDCVLKINSGAGGTESQDWASMLMRMYLRYAETNGYKATIANLQEGDEAGI 118 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ T+ I+G AYG+LKGE GVHRLVR+SPY++ +R TSF+S++V P+VDDSIE+ I Sbjct: 119 KTCTINIEGDFAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNILP 178 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAW 277 ++ DT+R+ GAGGQ+VN +S VR+ + ++++ + R Q KN+ A Sbjct: 179 ANISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNRENAM 238 Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 LR+ LY+ ELQ R E+ K +I WG QIRSYV + VKD RTN + + + Sbjct: 239 RQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNG 297 Query: 338 VLDGDLDDFMKATLA 352 V+DG +D F+KA L Sbjct: 298 VMDGKIDGFIKAYLM 312 >gi|120602348|ref|YP_966748.1| peptide chain release factor 2 [Desulfovibrio vulgaris DP4] gi|120562577|gb|ABM28321.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfovibrio vulgaris DP4] Length = 310 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 158/300 (52%), Positives = 206/300 (68%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 L+ I+ ++ ++ D L LA E++ L+ + + R++ +E + LLSG+ Sbjct: 2 LEGEINRLEALETCRNDVSEWLLLAEEDESAEALESLEEQIIRLEQLIEETEMNLLLSGK 61 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 D A LE+H GAGGTE+QDWA MLLRMY RWA+ +KTE L+ DG+EAGIKS TL Sbjct: 62 EDRFAALLEIHPGAGGTEAQDWAEMLLRMYLRWADTHGYKTEYLDYLDGDEAGIKSVTLR 121 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I GPNAYG LKGE+G+HRL+RISP+D++ RRHTSF+S+ V P V I+IEI ++D RID Sbjct: 122 IAGPNAYGLLKGERGIHRLIRISPFDASGRRHTSFASVDVIPDVGQDIKIEIKDTDLRID 181 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 +R+SG GGQ VNTT SAVR+THIPTG+V QCQ E+SQH NK A +LR +LYELEL+K Sbjct: 182 VFRSSGPGGQSVNTTSSAVRVTHIPTGIVAQCQNEKSQHHNKDSALQILRGRLYELELRK 241 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 EE +K IG+G QIR+Y LQPY++VKD RTN E VLDG LD ++ L Sbjct: 242 LEEEKKAQYGAKDAIGFGSQIRTYTLQPYRLVKDHRTNTEVGDVEAVLDGRLDKLLRDYL 301 >gi|285017297|ref|YP_003375008.1| peptide chain release factor 1 (rf-1) protein [Xanthomonas albilineans GPE PC73] gi|283472515|emb|CBA15020.1| probable peptide chain release factor 1 (rf-1) protein [Xanthomonas albilineans] Length = 361 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 106/325 (32%), Positives = 163/325 (50%), Gaps = 8/325 (2%) Query: 31 EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED-DCSILQETS 89 DP + + + RE L + + E + + + + +E + Sbjct: 24 SDPEVVSDHQRFRDYSREFAQLQPVATALAEETAAKANLASAEAMRADPELRELAEEEIA 83 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + D + +LEV AG GG E+ +A L RMY R+AE++ Sbjct: 84 AAQAHLADLDAQLALLLVPRDPRDDGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQG 143 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 +K E + GE G K I G AY LK E G HR+ R+ +S R HTS +++ Sbjct: 144 WKVEVESDNPGEHGGYKEIVARIVGRGAYSKLKFESGTHRVQRVPATESQGRIHTSAATV 203 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 + P DD EI ++ +D +IDT+R+SGAGGQHVN T+SA+RITH+P+GVVV+CQ ERSQ Sbjct: 204 AIIPEADDVEEIAVNPADLKIDTFRSSGAGGQHVNKTESAIRITHVPSGVVVECQTERSQ 263 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDL 326 H N+ +A L+A+L + E K+ A + K ++G G +IR+Y P + D Sbjct: 264 HANRDKALKRLKAQLLDAERNKQ--AAAEAQDRKLQVGSGDRSQRIRTYNF-PQGRITDH 320 Query: 327 RT-NIEKTSPSDVLDGDLDDFMKAT 350 R + V++GDLD ++ Sbjct: 321 RVEGLTLYDLPHVIEGDLDALIERL 345 >gi|86606113|ref|YP_474876.1| peptide chain release factor 1 [Synechococcus sp. JA-3-3Ab] gi|119361625|sp|Q2JUK1|RF1_SYNJA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|86554655|gb|ABC99613.1| peptide chain release factor 1 [Synechococcus sp. JA-3-3Ab] Length = 361 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 112/345 (32%), Positives = 171/345 (49%), Gaps = 14/345 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72 N L + DP + + E + + + R L+ + E Q L L Sbjct: 10 LKNVEATFQELTVRLADPDVATDPAELQRIAKARSSLEATVQTFHEWQKLTRELKQTEEL 69 Query: 73 LELALEEDDC---SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L +D E R + E L D + LE+ AG GG E Sbjct: 70 LREVASDDPELEAMARAELEQLRVRQEQLEEKLTLLLLPRDPNDEKNIMLEIRAGTGGEE 129 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + WA L RMYTR+AEK + + +GE G K A L I+G Y LK E GVHR Sbjct: 130 AALWAADLARMYTRYAEKMGWSVRLASLSEGEMGGYKEAILEIRGDQVYSKLKFEAGVHR 189 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ ++ R HTS +++ V P D +E+ I D I T R+ GAGGQ+VN ++A Sbjct: 190 VQRVPVTEAQGRVHTSTATVAVMP-EVDEVEVVIDPKDIEIKTARSGGAGGQNVNKVETA 248 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 V + H PTG+ V C +ERSQ +N+ +A +LRAKLYE++LQ+++ A+I + + ++G G Sbjct: 249 VDLLHKPTGIRVFCTEERSQLQNRQRAMQILRAKLYEMKLQEQQ--ASISSARRMQVGTG 306 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y + V D R N + +L+G+LD+ ++A + Sbjct: 307 SRSEKIRTYNYKD-NRVTDHRLN-QNFLLEPILEGELDELIQACI 349 >gi|220963008|gb|ACL94364.1| bacterial peptide chain Release factor 1 (RF-1) [Caulobacter crescentus NA1000] Length = 335 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 112/323 (34%), Positives = 175/323 (54%), Gaps = 10/323 (3%) Query: 38 NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKL 97 + E L +E L ++ + + L +A + + ++++ L Sbjct: 6 DGAEIVKLSKEHAELRPVAEAVERLAKLSAERAELDVMASDPEMAEMVRDEIQALDEKLP 65 Query: 98 -EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 + ++ A LEV AG GG E+ +A L RMY R+A+ + ++ E Sbjct: 66 VMERELALMLAPKDKDENASAILEVRAGTGGDEAALFAGDLFRMYQRYAQTQGWRVEIDS 125 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 I +GE G K I G +G LK E GVHR+ R+ ++ R HTS +++ V P Sbjct: 126 ISEGEMGGFKEIVASITGDGVFGRLKFESGVHRVQRVPATEAQGRIHTSAATVAVLP-EA 184 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + +EIEI ESD RIDTYR+SGAGGQHVN TDSAVRITH+PTGVVV E+SQH+N+A+A Sbjct: 185 EDVEIEIKESDLRIDTYRSSGAGGQHVNKTDSAVRITHLPTGVVVTSS-EKSQHQNRARA 243 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 L+A+LY+++ + + + E+ K+++G G +IR+Y P V D R N+ Sbjct: 244 MKNLKARLYDMQREALD--SARSEARKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 300 Query: 334 SPSDVLDGD-LDDFMKATLAIKK 355 + + +++GD LDD + +A + Sbjct: 301 NLARIMEGDALDDVINPLIAEDQ 323 >gi|326382082|ref|ZP_08203775.1| peptide chain release factor 1 [Gordonia neofelifaecis NRRL B-59395] gi|326199508|gb|EGD56689.1| peptide chain release factor 1 [Gordonia neofelifaecis NRRL B-59395] Length = 364 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 113/348 (32%), Positives = 167/348 (47%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ + + L + DP L + A+ + + L ++ ++ D EL Sbjct: 16 IDDILAEHAGLQAQLSDPALHDDPANARRVGKRFAELAPVMTTYTKLTAARDDLEAAREL 75 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A + + + DS+D LEV +GAGG ES +A+ Sbjct: 76 AEADAAFAEEIPALEATVTELDATLTDLL--APRDPHDSDDVVLEVKSGAGGEESALFAS 133 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190 L+RMY ++ E+ +K L + + G K ATL IK + LK E GVHR+ Sbjct: 134 DLVRMYLKYCERHGWKATVLGATESDLGGYKEATLSIKARETVRDGVWSRLKFEGGVHRV 193 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS + + +YP D+ EI+I ESD RID YR+SG GGQ VNTTDSAV Sbjct: 194 QRVPVTESQGRIHTSAAGVLIYPEPDEVEEIQIDESDLRIDVYRSSGKGGQGVNTTDSAV 253 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307 RITH+PT +VV CQ ERSQ +NKA+A +L A+ + E A + +I Sbjct: 254 RITHLPTNIVVTCQNERSQLQNKARAMQVLAAR--LKAAAEEEAEAEASAGRQAQIRTVD 311 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + + VL G++D + A + K Sbjct: 312 RSERIRTYNF-PENRITDHRIGYKANNLDSVLGGEMDALLDALVEADK 358 >gi|291460253|ref|ZP_06599643.1| peptide chain release factor 1 [Oribacterium sp. oral taxon 078 str. F0262] gi|291417200|gb|EFE90919.1| peptide chain release factor 1 [Oribacterium sp. oral taxon 078 str. F0262] Length = 360 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 117/352 (33%), Positives = 185/352 (52%), Gaps = 12/352 (3%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +F+ + + L P L ++ + L+RE+ L+ + Sbjct: 2 RMFENLEEVRRHYEELMLSLTRPELSNDIARYRKLIREQSELEPLYKTYLAFRKAEESER 61 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAG 126 LEL +E D +L+ + LQ K E E + L E D + +E+ GAG Sbjct: 62 DALELLQKEKDPELLEMAKEELQNAKEEQSLLGEKLRLLLLPKDENDDKNIVMEIRGGAG 121 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L RMY +AE+R F+TE + H+ G+K ++ G AY LK E G Sbjct: 122 GEEAALFAAELYRMYMSYAERRGFRTELVSFHETGLGGLKEVIFIVDGQGAYSRLKYESG 181 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S R HTS +++ V P +E+EI SD R++ +R+SGAGGQH+N T Sbjct: 182 VHRVQRVPETESGGRIHTSTATVAVMP-EAGEVEVEIKPSDVRMEVFRSSGAGGQHINKT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 SAVR+ HIP+G+V +CQ+ERSQ +N+ +A +LRA+LYE+E +KR E + ++++ Sbjct: 241 SSAVRLIHIPSGMVAECQEERSQLQNREKAMRLLRARLYEIESRKRHEES--AAEKRSQL 298 Query: 307 GWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G + IR+Y P V D R + ++L GDLD + + ++ Sbjct: 299 GTGERSEKIRTYNF-PQGRVTDHRIKLSLYCLEEILGGDLDPLIDPLITAEQ 349 >gi|158312864|ref|YP_001505372.1| peptide chain release factor 1 [Frankia sp. EAN1pec] gi|238686837|sp|A8L3V1|RF1_FRASN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|158108269|gb|ABW10466.1| peptide chain release factor 1 [Frankia sp. EAN1pec] Length = 356 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 112/343 (32%), Positives = 170/343 (49%), Gaps = 12/343 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + + + DP + + A+ L R L + + ++ D E Sbjct: 5 LAGMIAEHADIEKRLADPDIHNDPARARELTRRYAELATPVDLAQRLERVEGDLETAREF 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A ++ + Q + DS DA LEV AGAGG ES +A Sbjct: 65 AEQDPSFRDEVVALEASQADLAARLRAYL--VPVDPDDSRDAILEVKAGAGGEESALFAG 122 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-------YGWLKGEQGVH 188 LLRMY R+AE+R ++T+ L+ + + G + ++ +K +G L+ E GVH Sbjct: 123 DLLRMYLRYAERRGWRTQILDANPSDLGGYRDVSVAVKSRGTAAPGQGVFGRLRFEGGVH 182 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS + + V P ++IE+ +D RID +R+SG GGQ VNTTDS Sbjct: 183 RVQRVPVTESAGRIHTSAAGVLVLP-EAADVDIEVDPNDLRIDVFRSSGPGGQSVNTTDS 241 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307 AVRITH+PTGVVV CQ E+SQ +NK A +LRA+L +K E A +S+ + Sbjct: 242 AVRITHLPTGVVVSCQNEKSQLQNKESAMRILRARLLAAAREKAETAAAAARASQVRTVD 301 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 ++R+Y P + D R + + VLDGDLD ++A Sbjct: 302 RSEKVRTYNF-PENRISDHRIGYKAHNLEAVLDGDLDAVIEAL 343 >gi|124026680|ref|YP_001015795.1| peptide chain release factor 1 [Prochlorococcus marinus str. NATL1A] gi|229470356|sp|A2C4X1|RF1_PROM1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|123961748|gb|ABM76531.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. NATL1A] Length = 365 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 101/348 (29%), Positives = 170/348 (48%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + A L + DP + + + + + RER L+ ++ ++Q + L L Sbjct: 10 LETAKSSFQNLELQLADPDVASDPKQLETIARERSRLEPLVNDYLKLQIIEKECLEAKGL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130 E D ++ + + + + + L D LE+ AGAGG E+ Sbjct: 70 VKESRDDKEMELLAREELQNLELSKNELIQKLTLALLPKDPRDERSVMLEIRAGAGGNEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY R+ +K + + + + + G + + +KG + Y LK E GVHR+ Sbjct: 130 CLWAGDLARMYERYGQKLGWNVKPISSTEADMGGFREMIISVKGESVYSQLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P D +E++I +D I T R+ GAGGQ+VN ++A+ Sbjct: 190 QRVPSTESQGRVHTSTATVAVMP-EADPVEVKIESTDLEISTARSGGAGGQNVNKVETAI 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H P+G+ V C QERSQ +N+ +A +LRAKL ELE+ E A + +++G G Sbjct: 249 DLFHKPSGIRVFCTQERSQMQNRERAMEILRAKLLELEIA--EANAKERSARLSQVGTGD 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + D R + VL G L+D + A +A ++ Sbjct: 307 RSEKIRTYNYKD-NRTTDHRLGVNFP-LEQVLSGQLEDVIGACIAEEQ 352 >gi|91201018|emb|CAJ74075.1| strongly similar to class I peptide chain release factor [Candidatus Kuenenia stuttgartiensis] Length = 360 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 105/339 (30%), Positives = 176/339 (51%), Gaps = 8/339 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R + L DP + + LM+E L + ++ L Sbjct: 10 LEDMQKRYNELENLLADPQVIADSGRYMSLMKEHGCLSKIVHKYAQLTKTYIRKQDAENL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN-DAYLEVHAGAGGTESQDWA 134 + + + + D L+ + + + E ++ + +N + E+ AG GG E+ +A Sbjct: 70 LSDGEFADMARMELDELEGHEKAIMDEIKELFIAEDKTANKNVIAEIRAGTGGEEAAIFA 129 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY ++AE + +KTE + ++ + G K T I+G N Y L+ E G HR+ R+ Sbjct: 130 ADLFRMYIKYAESQNWKTELFDYNETDLGGFKEVTFSIEGRNVYQKLRFESGTHRVQRVP 189 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +++ R HTS +++ + P + +EI+I+ +D I+T+RASG GGQ VN T SAVRITH Sbjct: 190 QTEASGRVHTSTATVAILP-EVEEVEIDINPADILIETFRASGPGGQKVNKTSSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 I TG+VV+C E+SQHKNKA+A +LR++L+E +K + + + +IG G + Sbjct: 249 ISTGIVVKCLDEKSQHKNKAKAMRILRSRLHESIEEKNQLERDQV--RRIQIGTGDRSEK 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y V D R N + V+ G LD+ + A Sbjct: 307 IRTYNYS-QNRVTDHRINFSVYNLEHVMLGYLDEIIAAL 344 >gi|297180646|gb|ADI16856.1| protein chain release factor a [uncultured alpha proteobacterium HF0010_13E22] Length = 359 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 120/348 (34%), Positives = 179/348 (51%), Gaps = 14/348 (4%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D + R + + D E L RE L I ++ D + LA Sbjct: 8 DKVLARRDEVESWLADAASMS-PDELASLSRELSELRPVCEQIDLVRRLEGDRDAAVMLA 66 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQ-----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + E + + ++ L DS +A LEV AG GG E+ Sbjct: 67 EEAADDAEMAEMAQAEIQEIEARLPEEMNSLQLLLLPRDRDDSRNAILEVRAGTGGDEAA 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A+ L MY R+A K ++ E +E+ + G K AT I G + + LK E GVHR+ Sbjct: 127 LFASDLFGMYQRFAAKHGWRFEVMEVSETGIGGYKEATANIAGSDVFARLKFESGVHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P + ++I++ +SD RID +RASG GGQ VNTTDSAVR Sbjct: 187 RVPETEAGGRIHTSAATVAVLP-EAEDVDIDVQDSDLRIDVFRASGPGGQSVNTTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIPTG+VV Q E+SQHKN+A+A +LRA+LY+ E + + S K ++G G Sbjct: 246 ITHIPTGIVVSQQDEKSQHKNRAKAMKILRARLYDAERARLQAER--AASRKGQVGSGDR 303 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 +IR+Y P V D R N+ V+ G+ LD+ ++A +A + Sbjct: 304 SERIRTYNF-PQGRVTDHRINLTLYKLDKVIAGEALDEVVEALVAEDR 350 >gi|75906944|ref|YP_321240.1| peptide chain release factor 1 [Anabaena variabilis ATCC 29413] gi|119361508|sp|Q3MF91|RF1_ANAVT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|75700669|gb|ABA20345.1| bacterial peptide chain release factor 1 (bRF-1) [Anabaena variabilis ATCC 29413] Length = 366 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 102/348 (29%), Positives = 179/348 (51%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + Q + L + DP +N E + + + R L+ ++ + + + + ++ Sbjct: 10 LKSVEQTFNELTRRLADPDTARNPDEYQKIAKSRSSLEEVVNTYETWKIAQEELIGARQV 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130 E + LQE + E + L D + LE+ AG GG E+ Sbjct: 70 LKESNSDPELQEIAALEVNELEEKIKYLETRLKVLLLPRDPNDDKNIMLEIRAGTGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA LLRMY+R+A+ + ++ + + GE G K L I+G + Y LK E GVHR+ Sbjct: 130 SIWAGDLLRMYSRYADTQGWRVKLVSESLGEMGGFKEVILEIQGDSVYSKLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ + P D +EI I D + T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPATEAGGRVHTSTATVAIMP-EVDEVEIHIDPKDIEMTTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ + C +ERSQ +NK +A +LRAKLYE++L++++E + ++++G G Sbjct: 249 DLMHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQQEE--VTSMRRSQVGTGS 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + D R + S + VL+GDL+ +++ ++ + Sbjct: 307 RSEKIRTYNYKD-SRATDHRLG-QNFSLNPVLEGDLETVIQSCISQDQ 352 >gi|32491094|ref|NP_871348.1| hypothetical protein WGLp345 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|30173141|sp|Q8D2K9|RF1_WIGBR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|25166301|dbj|BAC24491.1| prfA [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 364 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 107/340 (31%), Positives = 175/340 (51%), Gaps = 7/340 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R + DP + +L +E L+ ++K ++ + Sbjct: 15 LKKLKNRYKEIKIILSDPFSAKKQKNFFLLSKEYSKLNILNKYLKSLESINNTIESTKTM 74 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134 L+ + + + + + K +E K + + + + ++E+ +G GG E+ + Sbjct: 75 LLDPEMHDLAKNEINIYKNKKKLIEKKIILYLIPNEDEYICNCFIEIRSGTGGKEASLFV 134 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY +++E + +KT+ + + E G K + I NAY LK E G HR+ RI Sbjct: 135 RDLCRMYIKYSEIKNWKTDIINYSNSEHGGYKEVIIKICNKNAYNKLKFESGGHRVQRIP 194 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +I V P + D +I SD RIDT+R+SGAGGQH+NTTDSA+RITH Sbjct: 195 ETESQGRIHTSTCTIAVMPEMLDFKLPKIKTSDLRIDTFRSSGAGGQHINTTDSAIRITH 254 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPT +VV+CQ ERSQHKNK++A +L+++L L+ +++ I K+ +G G + Sbjct: 255 IPTNIVVECQDERSQHKNKSKAMLVLKSRLQANLLKNKKQKEEII--RKSLLGSGDRSDR 312 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 IR+Y P + D R N+ +V+DG+L+ + L Sbjct: 313 IRTYNF-PQGRITDHRINLTIYKIDEVMDGNLNILINPIL 351 >gi|224531646|ref|ZP_03672278.1| peptide chain release factor 1 [Borrelia valaisiana VS116] gi|224511111|gb|EEF81517.1| peptide chain release factor 1 [Borrelia valaisiana VS116] Length = 357 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 128/342 (37%), Positives = 192/342 (56%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLI- 71 ++A ++ L K +D +L +N E +++E HL+ + ++I ++ DN Sbjct: 6 LNSATSKIKSLEEKLQDINLIKNQKEYSKIIKEYTHLEKINTKKIEYEKILSQINDNKTI 65 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L + +E I QE D ++ + + L E DS + +E+ AG GG E+ Sbjct: 66 LEKEEQQEMKELIKQELIDLDKKKEDIEHQIKILLLPQDENDSKNIIIEIRAGTGGEEAA 125 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +AN L MY +++EK+K+KTE + ++ E G K IKG + + LK E GVHR+ Sbjct: 126 LFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +SN R TS +++ V P ++++ +E D RID YR+SGAGGQHVNTTDSAVR Sbjct: 186 RIPITESNGRLQTSAATVAVLPNIEETEIEI-NEKDLRIDVYRSSGAGGQHVNTTDSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PT +VVQCQ ERSQHKNK QA +LRA+LYE E K++E + K ++G G Sbjct: 245 ITHLPTRIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P + D R NI + + G+LD + Sbjct: 303 SERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDPLLDPL 343 >gi|298491428|ref|YP_003721605.1| peptide chain release factor 1 ['Nostoc azollae' 0708] gi|298233346|gb|ADI64482.1| peptide chain release factor 1 ['Nostoc azollae' 0708] Length = 364 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 104/348 (29%), Positives = 177/348 (50%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + Q L + DP +N E + + + R L+ ++ + + + + ++ Sbjct: 10 LQSVEQTFHELTRRLADPDTAKNPDEYQKIAKSRSSLEEVVNTYETWKIAQEELVGARQV 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130 E + LQE + + E + L D + LE+ AG GG E+ Sbjct: 70 LKESNSDPELQEMAALEVKELEEKLEYLESRLKVLLLPCDPNDDKNIMLEIRAGTGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA LLRMY+R+A+ + +K + + GE G K L I+G Y LK E GVHR+ Sbjct: 130 SIWAGDLLRMYSRYADTQGWKVKLVSQSLGEMGGFKEVILEIQGDRVYSKLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS ++I + P D +EI I D + T R+ GAGGQ+VN ++A Sbjct: 190 QRVPATESGGRVHTSTATIAIMP-EVDDVEIHIDPKDIEMSTARSGGAGGQNVNKVETAA 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ + C +ERSQ +NK +A +LRAKLYE++L++++E + ++++G G Sbjct: 249 DLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQQE--AVTSMRRSQVGTGS 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D R + + VL+GDL+ +++ ++ + Sbjct: 307 RSEKIRTYNYKD-SRVTDHRLG-NNFTLNPVLEGDLETIVQSCISQYQ 352 >gi|78211899|ref|YP_380678.1| peptide chain release factor 1 [Synechococcus sp. CC9605] gi|119361630|sp|Q3AMQ9|RF1_SYNSC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|78196358|gb|ABB34123.1| peptide chain release factor 1 [Synechococcus sp. CC9605] Length = 365 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 101/348 (29%), Positives = 169/348 (48%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + A L + DP + + + + RER L+ + +E+Q + +L Sbjct: 10 LETATASFRNLERQLADPDVAADPKRLESIARERSRLEPLVLDFEELQRLESERDSARQL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130 + + ++E + + E E L D LE+ AGAGG E+ Sbjct: 70 LKDSRGDAAMEELAQDELASLQEQHATLTERLTLALLPRDPRDERSVMLEIRAGAGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY R+++K + +++ + + G + L ++G + Y LK E GVHR+ Sbjct: 130 CLWAGDLARMYERYSQKVGWAVQSISCTEADLGGFRELILSVRGDSVYSQLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P D++E+++ D I T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADAVEVQLDPKDLDISTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ V C QERSQ +N+ +A +LRAKL LE ++ + ++G G Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERALEILRAKL--LEREQAAAAERESSDRRAQVGSGD 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + D R T VL+G L+D + A +A ++ Sbjct: 307 RSEKIRTYNYKD-NRTTDHRLGRNFT-LEPVLEGQLEDLIGACIAEEQ 352 >gi|16332286|ref|NP_443014.1| peptide chain release factor 1 [Synechocystis sp. PCC 6803] gi|2500139|sp|P74707|RF1_SYNY3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|1653916|dbj|BAA18826.1| peptide chain release factor [Synechocystis sp. PCC 6803] Length = 365 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 97/348 (27%), Positives = 169/348 (48%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + Q L DP + N E + + + R L+ + + + D ++ Sbjct: 10 LASVEQTYQELTRMLADPDIATNPDELQRVAKARSSLEETVDTYETWKRSQEDLKGARQI 69 Query: 76 ALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + ++E + + L D + LE+ AG GG E+ Sbjct: 70 VKESGNDPEMREMAQLEVEELENAIGELEKRLTILLLPKDPNDEKNIMLEIRAGTGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L+RMYTR+AE + +K L + G K A L +KG Y LK E GVHR+ Sbjct: 130 SIWAGDLVRMYTRYAESQGWKVSLLSESLADMGGFKEAILEVKGDRVYSQLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ + P D +E++I D + T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPVTEAGGRVHTSTATVAIMP-EVDDVEVKIDPKDIEMSTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ + C +ERSQ +N+ +A +LRAKLY++ LQ++ + I + ++++G G Sbjct: 249 DLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYDMMLQEQND--AISSNRRSQVGTGS 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D R + L+G++ +++ ++ + Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLGR-NFDLNTALEGEIHTIIESCISQDQ 352 >gi|56416889|ref|YP_153963.1| peptide chain release factor 1 [Anaplasma marginale str. St. Maries] gi|222475254|ref|YP_002563670.1| peptide chain release factor 1 (prfA) [Anaplasma marginale str. Florida] gi|255003238|ref|ZP_05278202.1| peptide chain release factor 1 [Anaplasma marginale str. Puerto Rico] gi|255004365|ref|ZP_05279166.1| peptide chain release factor 1 [Anaplasma marginale str. Virginia] gi|81599140|sp|Q5PAH2|RF1_ANAMM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|254790858|sp|B9KIV2|RF1_ANAMF RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|56388121|gb|AAV86708.1| peptide chain release factor 1 [Anaplasma marginale str. St. Maries] gi|222419391|gb|ACM49414.1| peptide chain release factor 1 (prfA) [Anaplasma marginale str. Florida] Length = 359 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 126/349 (36%), Positives = 183/349 (52%), Gaps = 14/349 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++ L + DP V + RE L +S I+E Q + L L Sbjct: 7 LEGLCEKFRILKQQLSDPESLG-VQAFVVASREYSDLLPIMSLIEEYQTAQKEIEELEGL 65 Query: 76 ALEEDDCSILQETSDNLQRIK-----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 D + L + K Q L + DS A LE+ AG GG E+ Sbjct: 66 INSTDTDAELVHLAREELYTKQKLIPKLKHQLQLSLLPKDKDDSRSAILEIRAGTGGEEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 + L RMY ++AE++ +K E + I G K A+L I G + + LK E GVHR+ Sbjct: 126 ALFVCDLYRMYIKYAERKSWKVEPIGISTTGIGGYKEASLCIGGKDVFARLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S+ R HTS +++ V P + ++++I E D RID YR+SG GGQ VNTTDSAV Sbjct: 186 QRVPETESSGRLHTSAATVAVLP-EVEEVDLKIDEKDLRIDVYRSSGPGGQSVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG+VV Q E+SQHKNK++A +LRA+LY LE QK E+ I + K++IG G Sbjct: 245 RITHIPTGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKIEDE--ISKMRKSQIGSGD 302 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 +IR+Y + D R N+ ++ +GDLD+F+ A +A + Sbjct: 303 RSERIRTYNFL-QSRITDHRINMTLYRLEHIMKEGDLDEFVDALIADDQ 350 >gi|320102129|ref|YP_004177720.1| peptide chain release factor 1 (bRF-1) [Isosphaera pallida ATCC 43644] gi|319749411|gb|ADV61171.1| bacterial peptide chain release factor 1 (bRF-1) [Isosphaera pallida ATCC 43644] Length = 364 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 109/352 (30%), Positives = 176/352 (50%), Gaps = 13/352 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA---ISFIKEIQDRLCD 68 +F+ +R LN + P L + LMRER L + E+ R + Sbjct: 1 MFEKIKADYRRYEELNRELASPDLVNDPGRLAALMRERSALAKLAVPYARYLELTRRRAE 60 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLLSGEADSNDAYLEVHAGAG 126 ++E + + Q D L + + E + +D +E+ AG G Sbjct: 61 VQQVIETESDPEMKEYAQAEFDQLAQAEAESAEYLKTLIYEQATGSDHAGVIVEIRAGTG 120 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L MY R+ E++ ++ E LEI E G + A+ ++G AY L+ E G Sbjct: 121 GDEAALFARDLYEMYRRFVERQGWRFEPLEIAPTELGGFREASFGVRGEGAYRHLQFESG 180 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 HR+ R+ ++ R HTS +++ V P + +EIE+ + D +ID RA G GGQH N T Sbjct: 181 GHRVQRVPVTETQGRIHTSAATVAVLP-EPEEVEIELRDEDLQIDVMRAGGPGGQHQNKT 239 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +S VRITH+P+G+VV C+ ERSQHKNKA+A +LR++LY E Q+ + ++ ++ I Sbjct: 240 ESGVRITHLPSGIVVNCRDERSQHKNKAKALRILRSRLY--EAQRNAAQSQRSQTRRSLI 297 Query: 307 GWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R N+ ++ G+L+ + + + Sbjct: 298 GSGDRSQRIRTYNF-PQNRVTDHRINLTLHQLDRIVAGELELVTRPLIEHDR 348 >gi|319787948|ref|YP_004147423.1| peptide chain release factor 1 [Pseudoxanthomonas suwonensis 11-1] gi|317466460|gb|ADV28192.1| peptide chain release factor 1 [Pseudoxanthomonas suwonensis 11-1] Length = 360 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 107/321 (33%), Positives = 166/321 (51%), Gaps = 8/321 (2%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + + + L RE L+ + + D + + + + QE Sbjct: 25 DPGVMGDPARFRDLSREFSQLEPVATALAAEARAREDLATAEAMRDDPELAELAQEEIAA 84 Query: 92 LQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + + + D + +LEV AG GG E+ +A L RMY R+AE++ + Sbjct: 85 ARGRLEQLDHELALLLVPKDPRDEGNLFLEVRAGTGGDEAALFAGDLFRMYARYAERQGW 144 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K E + GE G K I G AY LK E G HR+ R+ +S R HTS +++ Sbjct: 145 KVEVESDNPGEHGGHKEIVARIVGRGAYSKLKFESGTHRVQRVPATESQGRIHTSAATVA 204 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + P D+ EI I+ +D ++DT+R+SGAGGQHVN TDSA+RITH+P+G+VV+ Q ERSQH Sbjct: 205 IIPEADEIEEITINPADLKVDTFRSSGAGGQHVNKTDSAIRITHLPSGLVVESQTERSQH 264 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLR 327 N+ +A L+A+L + E K++ A ES + ++G G +IR+Y P + D R Sbjct: 265 ANRDKAMKRLKAQLLDAERSKQQ--AAQAESRRLQVGSGDRSQRIRTYNF-PQGRITDHR 321 Query: 328 T-NIEKTSPSDVLDGDLDDFM 347 + ++L+GDLD + Sbjct: 322 VEGLTLYDLPNILEGDLDPLV 342 >gi|20139347|sp|Q9AG29|RF1_STRAG RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|13487345|gb|AAK27505.1|AF343879_1 peptide chain release factor 1 [Streptococcus agalactiae] Length = 359 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 97/348 (27%), Positives = 165/348 (47%), Gaps = 12/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP++ + L RE + ++ +E + + + E+ Sbjct: 7 LQPVEDRYEELGELLSDPYVVSDTKRFMELSREEANTRETVTAYREYKQVIQNISDAEEM 66 Query: 76 ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + L+E + + + E + L D + LE+ AGG E+ Sbjct: 67 IKDASGDAELEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL MY ++AE + ++ E +E GIK ++ G + Y LK E G HR+ Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + +E EI + D R D Y ASGAGGQ+VN +AV Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYEIDQKDLRADIYHASGAGGQNVNKVATAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 R+ HIPTG+ V+ Q+ER+Q KN+ +A ++RA++ + Q ++ + K+ +G G Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +L G +D+ + A + + Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQ 350 >gi|255262532|ref|ZP_05341874.1| peptide chain release factor 1 [Thalassiobium sp. R2A62] gi|255104867|gb|EET47541.1| peptide chain release factor 1 [Thalassiobium sp. R2A62] Length = 351 Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats. Identities = 118/341 (34%), Positives = 169/341 (49%), Gaps = 12/341 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + R FL K + L +E L I I E Q D + Sbjct: 7 LEQILGRFQFLEAKMASGDA---ADDIAALAKEYSDLRPVIDVITEYQTLEADLAEAELM 63 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + +E L+ + Q L AD+ A +E+ G GG E+ +A Sbjct: 64 MSDPDMKELAEEELPMLRARLPEIEQNLQIALLPKDAADARPAMIEIRPGTGGDEAALFA 123 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMY R+AE R + E +E E GIK T +KG + +K E GVHR+ R+ Sbjct: 124 GDLLRMYQRYAEARGWTFEIIEEQSTELGGIKEVTAHVKGEGVFARMKYESGVHRVQRVP 183 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P + ++I+I D RIDT RASG+GGQHVNTTDSAVRITH Sbjct: 184 TTESGGRIHTSAATVAVLP-EAEDVDIQIDPGDLRIDTMRASGSGGQHVNTTDSAVRITH 242 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IP+G+VV E+SQH+N+ A L+ +LY+ E Q+ + +IG G + Sbjct: 243 IPSGIVV-VSSEKSQHRNREIAMLTLKTRLYDAERQRVDGER--SADRAAQIGSGDRSER 299 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IR+Y P + D R N+ V+ GDLD+ ++A A Sbjct: 300 IRTYNF-PQGRMTDHRINLTLYKLDQVMQGDLDETIEALTA 339 >gi|166368082|ref|YP_001660355.1| peptide chain release factor 1 [Microcystis aeruginosa NIES-843] gi|189039979|sp|B0JYC5|RF1_MICAN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|166090455|dbj|BAG05163.1| peptide chain release factor 1 [Microcystis aeruginosa NIES-843] Length = 366 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 105/348 (30%), Positives = 178/348 (51%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + Q L + DP + N E L + R L+ ++ + Q D + ++ Sbjct: 10 LQSVEQTYKELTRRLADPDVTGNPGELHRLAKSRASLEETVNTYEIWQKSQEDLIGAKQI 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E L+E + E + L D + LE+ AG GG E+ Sbjct: 70 FKESASDPELREMAALEVAELEEKIATLEDQLTILLLPRDPLDEKNIMLEIRAGTGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L+R+Y+++AE + +K L + G K A L IKG N Y LK E GVHR+ Sbjct: 130 SIWAGDLVRLYSKYAETQNWKVSLLSESQADMGGFKEAILEIKGDNVYSKLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +++ R HTS +++ + P D +E+ I D + T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPLTEASGRVHTSTATVAIMP-EVDDVEVHIDPKDIELTTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ V C +ERSQ +N+ +A +LRAKLY+++LQ+++E + ++++G G Sbjct: 249 DLIHKPTGIRVFCTEERSQLQNRERAMQILRAKLYDMKLQEQQE--AVSSMRRSQVGTGS 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + + D R N + S +LDGD+++ +++ +A + Sbjct: 307 RSEKIRTYNYKD-NRLTDHRLN-QNFSLDRILDGDIEEVIQSCIAKDQ 352 >gi|126664153|ref|ZP_01735146.1| peptide chain release factor RF-2 [Flavobacteria bacterium BAL38] gi|126623867|gb|EAZ94562.1| peptide chain release factor RF-2 [Flavobacteria bacterium BAL38] Length = 285 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 131/279 (46%), Positives = 198/279 (70%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + ++ +E Q +E +F ++LS E DS A L++ AGAGGTES DWA Sbjct: 1 MDFYKEGDVTEEEVETQYQHTLSHIEDLEFRNMLSDEGDSMSAVLQITAGAGGTESCDWA 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 +ML+RMY W EK+ +K + L +GE AGIK+ TL +G A+G+LKGE GVHRLVRIS Sbjct: 61 SMLMRMYLMWGEKQGYKIKELNFQEGEVAGIKTVTLEFEGDFAFGYLKGENGVHRLVRIS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+DSN++RHTSF+S++VYP+VDD+IEI+I+ +D I T R+SGAGGQ+VN ++ V++ H Sbjct: 121 PFDSNAKRHTSFASVYVYPLVDDTIEIDINPADIEIITSRSSGAGGQNVNKVETKVQLFH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 PTG+ +QC + RSQ N+ +A ML+++LYE+EL+K++ + E+ K +I WG QIR+ Sbjct: 181 KPTGIQIQCSETRSQQDNRQRAMQMLKSQLYEIELKKQQAQRSDIEAGKMKIEWGSQIRN 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 YV+ PY++VKD+R+ E + +++G++D+F+KA L + Sbjct: 241 YVMHPYKLVKDVRSGHESSDVEGIMNGEIDNFLKAYLMM 279 >gi|307154812|ref|YP_003890196.1| peptide chain release factor 1 [Cyanothece sp. PCC 7822] gi|306985040|gb|ADN16921.1| peptide chain release factor 1 [Cyanothece sp. PCC 7822] Length = 370 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 98/348 (28%), Positives = 177/348 (50%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + L + DP + N E + + + R L+ ++ + Q + ++ Sbjct: 10 LKSVELTYRELTRRLADPDIATNPDELQRVAKARSSLEETVNTYETWQKTKEELAGARQI 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130 E L+E + + + + L D + LE+ AG GG E+ Sbjct: 70 LKESAGDLELREMAALEVQELEQQLETLESRLKVLLLPRDPNDDKNIMLEIRAGTGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L+RMY+R+AE +++ + + + G K A L I+G + Y LK E GVHR+ Sbjct: 130 SIWAGDLVRMYSRYAESQRWAVKLVSESLADMGGFKEAILEIQGDSVYSKLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ + P D +E++I D I T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPVTEAGGRVHTSTATVAIMP-EVDEVEVQIDPKDLEISTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ + C +ERSQ +N+ +A +LRAKLYE++L++++E + ++++G G Sbjct: 249 DLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLREQQE--AVSSMRRSQVGTGS 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D R + S L+GD+D+ +++ ++ + Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLG-QNFSLVGALEGDIDEIIQSCISRDQ 352 >gi|332827204|gb|EGJ99978.1| hypothetical protein HMPREF9455_03672 [Dysgonomonas gadei ATCC BAA-286] Length = 318 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 131/315 (41%), Positives = 196/315 (62%), Gaps = 11/315 (3%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ + L I +E++ + + + E + + VE + + Sbjct: 1 MKIIRGLKGWIEGYEEVKGAAEELQLAFDFQKEGVTSEEEVDAAYENAV--KLVENLELK 58 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++L E D A L+V++GAGGTE QDWA+ML RMY RW + R +KT DG+EAGI Sbjct: 59 NMLRREEDKLGAVLKVNSGAGGTEGQDWASMLFRMYQRWCDARGYKTTITHWQDGDEAGI 118 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ATL ++G AYG+LK E GVHRLVR+SPY++ +R TSF+S++V P+VDD+IEIE+++ Sbjct: 119 KTATLQVEGEYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVYVVPLVDDTIEIEVNQ 178 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAW 277 SD DT+R+SGAGGQ+VN ++ VR+ + +V++ + RSQ NK A Sbjct: 179 SDITWDTFRSSGAGGQNVNKVETGVRLHYKYKDPETGEEKEIVIENTESRSQFGNKDNAI 238 Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 +L+++LYE+EL++R + E+ K +I WG QIRSYV + VKD RTN + ++ + Sbjct: 239 RLLKSQLYEMELERRSREQSKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSNVNA 297 Query: 338 VLDGDLDDFMKATLA 352 V+DGDLDDF+KA L Sbjct: 298 VMDGDLDDFIKAYLM 312 >gi|241206502|ref|YP_002977598.1| peptide chain release factor 1 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860392|gb|ACS58059.1| peptide chain release factor 1 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 359 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 112/344 (32%), Positives = 175/344 (50%), Gaps = 18/344 (5%) Query: 18 NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 +R + + P L E L ++ I+ + + + L L Sbjct: 11 ELERRFGEIEARMSAGPA----ADVYVKLASEYSELQPVVTKIRVYEKAVAELADLETLL 66 Query: 77 LEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 + ++E ++ E + Q L AD A LE+ AG GG+E+ Sbjct: 67 EDRSVDREMRELAELELPEVKEQIEVLEQEMQILLLPKDAADEKSAILEIRAGTGGSEAA 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R+A ++ +K E L +GE G K I G + LK E GVHR+ Sbjct: 127 LFAGDLFRMYERFAAEKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P + I+IEI D RIDT R+SGAGGQHVNTTDSAVR Sbjct: 187 RVPETEAGGRIHTSAATVAVLP-EAEEIDIEIRAEDIRIDTMRSSGAGGQHVNTTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+P+G+VV E+SQH+N+A+A +LR++LY+ E Q+ + K+++G G Sbjct: 246 ITHLPSGIVVTSS-EKSQHQNRAKAMQVLRSRLYDAERQR--ADSERSADRKSQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ +++G++++ + A +A Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVDALMA 345 >gi|306818471|ref|ZP_07452194.1| peptide chain release factor RF1 [Mobiluncus mulieris ATCC 35239] gi|304648644|gb|EFM45946.1| peptide chain release factor RF1 [Mobiluncus mulieris ATCC 35239] Length = 366 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 106/347 (30%), Positives = 169/347 (48%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++ + + + DP L + A+ + R L + + + D E+ Sbjct: 11 VEPLLEEYAAVEREMSDPDLHSDQSRARRVGRRYAELGRVAAAARAFLEAQDDLEAGREM 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A E+ D + + D+ D +E+ AG GG ES +A Sbjct: 71 AAEDPDFAAELPKLQEAFYTVQAALIEIL--TPRDPDDARDVIMEIKAGEGGEESALFAG 128 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVH 188 L+RMY +AEK + + L + + + G+K A + + LK E GVH Sbjct: 129 DLMRMYQHYAEKMGWAVQILGLTESDLGGVKDAQIAFKAKGNPTPEEGVWAHLKYEGGVH 188 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS + + V P +++ +IEI +D RID YR+SG GGQ VNTTDS Sbjct: 189 RVQRVPVTESQGRIHTSAAGVLVMPEAEETGDIEIDPNDLRIDVYRSSGPGGQSVNTTDS 248 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307 AVRITHIPTG+VV Q E+SQ +NK +LR++L +LE +KRE A +S+ + Sbjct: 249 AVRITHIPTGIVVSMQNEKSQLQNKEAGMRVLRSRLMQLEQEKREAEAAEARASQVRTVD 308 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RT + + VL+G+L +++ + Sbjct: 309 RSERIRTYNF-PENRIADHRTGYKAYNLDAVLNGELAPVIQSAIDAD 354 >gi|116254019|ref|YP_769857.1| peptide chain release factor 1 [Rhizobium leguminosarum bv. viciae 3841] gi|119361588|sp|Q1MBB2|RF1_RHIL3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|115258667|emb|CAK09771.1| putative peptide chain release factor 1 [Rhizobium leguminosarum bv. viciae 3841] Length = 359 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 111/344 (32%), Positives = 178/344 (51%), Gaps = 18/344 (5%) Query: 18 NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 +R + + P L E L ++ I+ + + + L L Sbjct: 11 ELERRFGEIEARMSAGPA----ADVYVKLASEYSELQPVVTKIRVYEKAVTELADLETLL 66 Query: 77 LEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 + +++ ++ ++I+ + Q L AD A LE+ AG GG+E+ Sbjct: 67 EDRSVDREMRDLAELELPEVKEQIEALEQEMQILLLPKDAADEKSAILEIRAGTGGSEAA 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY R+A ++ +K E L +GE G K I G + LK E GVHR+ Sbjct: 127 LFAGDLFRMYERFAAEKGWKVEVLSASEGEAGGYKEIIATITGKGVFAKLKFESGVHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P + I+IEI D RIDT R+SGAGGQHVNTTDSAVR Sbjct: 187 RVPETEAGGRIHTSAATVAVLP-EAEEIDIEIRAEDIRIDTMRSSGAGGQHVNTTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+P+G+VV E+SQH+N+A+A +LR++LY+ E Q+ + K+++G G Sbjct: 246 ITHLPSGIVVTSS-EKSQHQNRAKAMQVLRSRLYDAERQR--ADSERSADRKSQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ +++G++++ + A +A Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVDALMA 345 >gi|218249952|ref|YP_002374604.1| peptide chain release factor 2 [Borrelia burgdorferi ZS7] gi|223889107|ref|ZP_03623696.1| peptide chain release factor 2 [Borrelia burgdorferi 64b] gi|224533928|ref|ZP_03674513.1| peptide chain release factor 2 [Borrelia burgdorferi CA-11.2a] gi|226322014|ref|ZP_03797539.1| peptide chain release factor 2 [Borrelia burgdorferi Bol26] gi|218165140|gb|ACK75201.1| peptide chain release factor 2 [Borrelia burgdorferi ZS7] gi|223885356|gb|EEF56457.1| peptide chain release factor 2 [Borrelia burgdorferi 64b] gi|224512931|gb|EEF83297.1| peptide chain release factor 2 [Borrelia burgdorferi CA-11.2a] gi|226232604|gb|EEH31358.1| peptide chain release factor 2 [Borrelia burgdorferi Bol26] Length = 282 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 138/280 (49%), Positives = 189/280 (67%), Gaps = 1/280 (0%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + ++ ++ + + S E D+N+A+L +H+GAGGTE+ DW Sbjct: 1 MCEIAENEKDTSGLEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGGTEACDWV 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 ML RMY+R+AE++K+KTE +++ + E GIKS T+ IKG AYG LK E G+HRL+RIS Sbjct: 61 AMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRIS 119 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+D+ +RHTSF+S++V PV+DD IEI I D RIDTYRASGAGGQHVN T SAVRITH Sbjct: 120 PFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITH 179 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 I TG+V Q Q +RSQHKNK A +L+++LYE K +E + +K EI WG QIRS Sbjct: 180 IETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGNQIRS 239 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 YV QPY +VKD RT E ++ + V+DG++D+F++ L K Sbjct: 240 YVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 279 >gi|124024426|ref|YP_001018733.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT 9303] gi|123964712|gb|ABM79468.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT 9303] Length = 319 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 141/308 (45%), Positives = 196/308 (63%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 MR+ + + IK + + D LEL E D +L E LQ+++ ++ + E Sbjct: 1 MRQLDEVKAQLVQIKLWRSAVNDAQATLELYDLEPDDEMLSEAQSGLQQLRQGLDRWELE 60 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LLSGE D A L ++AGAGGT++QDWA MLLRMYTRWAE + E+ +GEEAGI Sbjct: 61 RLLSGEYDKKGAVLSINAGAGGTDAQDWAQMLLRMYTRWAEDHDMRVTVDELSEGEEAGI 120 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 KSAT+ I+G AYG+L+ E+G HRLVRISP+++N +R TSF+ + + P +D +E++I E Sbjct: 121 KSATVEIEGRYAYGYLRNEKGTHRLVRISPFNANGKRQTSFAGVEIMPKIDQEVELDIPE 180 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D + T R+ GAGGQ+VN ++AVRI HIPTG+ V+C QERSQ +NK +A +L+AKL Sbjct: 181 KDLEVTTSRSGGAGGQNVNKVETAVRILHIPTGLAVRCTQERSQLQNKEKALALLKAKLM 240 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 + ++R E WG QIR+YV PYQMVKDLRT E T V++G+LD Sbjct: 241 VIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQMVKDLRTAEETTDVQAVMNGELDR 300 Query: 346 FMKATLAI 353 F++ L Sbjct: 301 FIQTLLRQ 308 >gi|218440653|ref|YP_002378982.1| peptide chain release factor 1 [Cyanothece sp. PCC 7424] gi|226739098|sp|B7KI17|RF1_CYAP7 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|218173381|gb|ACK72114.1| peptide chain release factor 1 [Cyanothece sp. PCC 7424] Length = 370 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 98/348 (28%), Positives = 177/348 (50%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + Q L + DP + N E + + + R L+ ++ + Q + ++ Sbjct: 10 LKSVEQTYKELTRRLADPDIATNPDELQRVAKARSSLEETVNTYETWQKTKEEITGARQI 69 Query: 76 ALEEDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E S ++E + ++++ + L D + LE+ AG GG E+ Sbjct: 70 LKEAGGDSEMREMAALEVEELEEQLEQLENKLKVLLLPRDPNDDKNIMLEIRAGTGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L+RMY+R+AE + + + + + G K A L IKG Y LK E GVHR+ Sbjct: 130 SIWAGDLVRMYSRYAESQNWVVKLVSESLADMGGFKEAILEIKGDQVYSKLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ + P D +E++I D + T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPVTEAGGRVHTSTATVAIMP-EVDEVEVQIDPKDIEVSTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ + C +ERSQ +N+ +A +LRAKLYE++L++++E + ++++G G Sbjct: 249 DLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLREQQE--AVSSMRRSQVGTGS 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D R + S L+GD++ +++ + + Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLG-QNFSLVGALEGDIEVIIQSCIGKDQ 352 >gi|195941813|ref|ZP_03087195.1| peptide chain release factor 2 [Borrelia burgdorferi 80a] Length = 282 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 138/280 (49%), Positives = 189/280 (67%), Gaps = 1/280 (0%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + ++ ++ + + S E D+N+A+L +H+GAGGTE+ DW Sbjct: 1 MCEIAENEKDTNGLEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGGTEACDWV 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 ML RMY+R+AE++K+KTE +++ + E GIKS T+ IKG AYG LK E G+HRL+RIS Sbjct: 61 AMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRIS 119 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+D+ +RHTSF+S++V PV+DD IEI I D RIDTYRASGAGGQHVN T SAVRITH Sbjct: 120 PFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITH 179 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 I TG+V Q Q +RSQHKNK A +L+++LYE K +E + +K EI WG QIRS Sbjct: 180 IETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGNQIRS 239 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 YV QPY +VKD RT E ++ + V+DG++D+F++ L K Sbjct: 240 YVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 279 >gi|254431314|ref|ZP_05045017.1| peptide chain release factor 1 [Cyanobium sp. PCC 7001] gi|197625767|gb|EDY38326.1| peptide chain release factor 1 [Cyanobium sp. PCC 7001] Length = 365 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 106/348 (30%), Positives = 166/348 (47%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + A + L + DP + N + + + RER L+ + +++Q L + L Sbjct: 10 LEAARRTFETLERQLADPAVASNPDQLQAIARERARLEPLVLDQRQLQKLLAEEADARTL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ-----FESLLSGEADSNDAYLEVHAGAGGTES 130 + ++E + + E + L D LE+ AGAGG E+ Sbjct: 70 LRDHRGDRAMEELASEELKQLAERIHSLRTSLTIALLPRDPRDERSVMLEIRAGAGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY R+A+ ++ E + + E G K L I+G + LK E GVHR+ Sbjct: 130 AIWAGDLARMYERYAQSVGWRVEPVSASEAELGGYKELILSIRGEGVFSQLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P D +E++I D I T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADPVEVQIEPGDVEISTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H P+G+ V C QERSQ +N+ +A +LRAKLY E Q E A + ++G G Sbjct: 249 DLLHKPSGIRVFCTQERSQMQNRERAMEILRAKLY--ERQLAEANARERSARLAQVGSGD 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + D R + VL+G L D + A +A + Sbjct: 307 RSEKIRTYNYKD-NRATDHRLGRNFS-LEPVLNGQLQDVIGACIAADQ 352 >gi|154252199|ref|YP_001413023.1| peptide chain release factor 1 [Parvibaculum lavamentivorans DS-1] gi|171769599|sp|A7HTY3|RF1_PARL1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|154156149|gb|ABS63366.1| peptide chain release factor 1 [Parvibaculum lavamentivorans DS-1] Length = 355 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 113/349 (32%), Positives = 171/349 (48%), Gaps = 20/349 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQN--VIEAKMLMRERQHLDNAISFIKEI---QDRLCDNL 70 + + R + ++ + L +E L+ + I + + D Sbjct: 7 LQSVIARFEAVQSEMN-----SDVPRDRFVALSKEFSELEPVAAAIGHLLARRREYADAE 61 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LL + + + Q L AD + LEV AG GG E+ Sbjct: 62 QLLRVRDMAEMAKEEIARLNEELPRLEH--EVQLMLLPKDAADDRNVILEVRAGTGGDEA 119 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A + +K E + +GE G K I GP Y LK E GVHR+ Sbjct: 120 ALFAGDLFRMYERYASNQGWKVELIAASEGEMGGYKEIIAGISGPGVYAKLKFESGVHRV 179 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ + R HTS +++ V P + +++EI + D RID YRASGAGGQHVN T+SAV Sbjct: 180 QRVPVTEGGGRIHTSAATVAVLP-EAEEVDVEIEDKDLRIDVYRASGAGGQHVNKTESAV 238 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+VV Q E+SQHKNKA+A +LRA++++ E ++ + + K ++G G Sbjct: 239 RITHLPTGIVVAQQDEKSQHKNKARAMQILRARIFDAERERLDRERSAA--RKGQVGSGD 296 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 +IR+Y P V D R N+ VL+G+ L + + A +A + Sbjct: 297 RSERIRTYNF-PQSRVTDHRINLTLHKLDQVLEGEALGELIDALIAEDQ 344 >gi|283455530|ref|YP_003360094.1| peptide chain release factor 1 [Bifidobacterium dentium Bd1] gi|283102164|gb|ADB09270.1| prfA Bacterial Peptide Chain Release Factor 1 (RF-1) [Bifidobacterium dentium Bd1] Length = 340 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 106/336 (31%), Positives = 162/336 (48%), Gaps = 16/336 (4%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P + + + + L R L +S + D E+A E+ D + + Sbjct: 1 MAEPEVASDPDKMRKLGRRHAELGAIVSAYTAYKQTKDDLEAAKEMASEDPDFAEEAKRL 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 +N E + D+ D +E+ AG GG E+ +A LLRMY R+AEKR Sbjct: 61 ENELPEIEEKLRTAL--IPRDPDDARDTIMEIKAGTGGEEAALFAGDLLRMYMRYAEKRG 118 Query: 150 FKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 + + E G+K L I + LK E GVHR+ RI +S R Sbjct: 119 WAVTLQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEGGVHRVQRIPVTESQGRI 178 Query: 203 HTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 TS + + V+P +D EI+I D +ID + +SG GGQ VNTT SAVR+THIPTG+VV Sbjct: 179 QTSAAGVIVFPEADEDDDEIDIDPKDLKIDIFMSSGPGGQSVNTTYSAVRMTHIPTGIVV 238 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQ 318 Q E+SQ +N+A A +L+++L L ++ EE A + +++ +IR+Y Sbjct: 239 SMQDEKSQIQNRASALRVLKSRL--LAMKHEEEAAQAADMRHSQVRSLDRSERIRTYNF- 295 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 P + D RTN + + VLDGDL + + + Sbjct: 296 PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 331 >gi|150024963|ref|YP_001295789.1| peptide chain release factor 2 [Flavobacterium psychrophilum JIP02/86] gi|149771504|emb|CAL42973.1| Peptide chain release factor 2 (RF-2) [Flavobacterium psychrophilum JIP02/86] Length = 293 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 135/286 (47%), Positives = 199/286 (69%), Gaps = 2/286 (0%) Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 + + + E + + +E + +++LS E D+ A L++ AGAG Sbjct: 3 DELQLAYDFYKEGELSEQELDQQYEATNT--HIEGIELKNMLSDEGDALSAVLQITAGAG 60 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 GTES DWA ML+RMY WA+ + +K + L G+ AGIK+ TL I+G ++G+LKGE G Sbjct: 61 GTESCDWAEMLMRMYIMWAQNQGYKIKELNFQKGDAAGIKTVTLEIEGDYSFGYLKGENG 120 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHRLVRISP+DSN++RHTSF+S++VYP+VDD+IEIEI+ +D I T R+SGAGGQ+VN Sbjct: 121 VHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIEINPADIEIITARSSGAGGQNVNKV 180 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 ++ V++TH PTG+ +QC + RSQH N+ +A MLR++LYE+EL+K++E N E+ K +I Sbjct: 181 ETKVQLTHKPTGIQIQCSETRSQHDNRNRAMQMLRSQLYEIELKKQQEQRNDIEAGKMKI 240 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 WG QIR+YV+QPY++VKD+RT E + V++G++D F+KA L Sbjct: 241 EWGSQIRNYVMQPYKLVKDVRTGHETSDVDSVMNGNIDAFLKAYLM 286 >gi|289549312|ref|YP_003474300.1| peptide chain release factor 1 [Thermocrinis albus DSM 14484] gi|289182929|gb|ADC90173.1| peptide chain release factor 1 [Thermocrinis albus DSM 14484] Length = 359 Score = 200 bits (509), Expect = 3e-49, Method: Composition-based stats. Identities = 111/338 (32%), Positives = 177/338 (52%), Gaps = 4/338 (1%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + A +R L + DP + ++ ++ + +E + L+ +E + L + EL Sbjct: 10 LNLAEKRYLQLQAEVLDPDIVKDRLKFAQISKELKELEELHRLHQEYRKILKELEETKEL 69 Query: 76 ALEEDDCSILQETS-DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + +E + ++ + + L E DS + LE+ AG GG E+ +A Sbjct: 70 LKNPELEPLAKEEIKRLEKELESTEKRIKIHLLPKDERDSKNVILEIRAGVGGEEAALFA 129 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LL MY R+AE++ +K L G K L++G AY LK E GVHR+ R+ Sbjct: 130 RDLLHMYQRYAEEKGWKFSILSAQKTGLGGYKEVIALVEGEGAYSRLKYESGVHRVQRVP 189 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS +++ V P D++ I D +I+T+RAS AGGQ+VNTT++AVRITH Sbjct: 190 VTEAGGRIHTSTATVAVLPEADETEV-HIDPKDLKIETFRASSAGGQYVNTTETAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGRQIR 313 +PTG+VV CQ ERSQ++N+ +A +L A+L + + QKREE+A +IR Sbjct: 249 LPTGIVVTCQDERSQYQNRMKALKILYARLKDFYDRQKREELAKEKREQIGTGERSEKIR 308 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +Y V D R N+ DVL+G LD+ + A + Sbjct: 309 TYNFI-QNRVTDHRINLTIYRLQDVLEGKLDEIIDALI 345 >gi|254995073|ref|ZP_05277263.1| peptide chain release factor 1 [Anaplasma marginale str. Mississippi] Length = 359 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 125/349 (35%), Positives = 183/349 (52%), Gaps = 14/349 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++ L + DP V + RE L +S ++E Q + L L Sbjct: 7 LEGLCEKFRILKQQLSDPESLG-VQAFVVASREYSDLLPIMSLVEEYQTAQKEIEELEGL 65 Query: 76 ALEEDDCSILQETSDNLQRIK-----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 D + L + K Q L + DS A LE+ AG GG E+ Sbjct: 66 INSTDTDAELVHLAKEELYTKQKLIPKLKHQLQLSLLPKDKDDSRSAILEIRAGTGGEEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 + L RMY ++AE++ +K E + I G K A+L I G + + LK E GVHR+ Sbjct: 126 ALFVCDLYRMYIKYAERKSWKVEPIGISTTGIGGYKEASLCIGGKDVFARLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S+ R HTS +++ V P + ++++I E D RID YR+SG GGQ VNTTDSAV Sbjct: 186 QRVPETESSGRLHTSAATVAVLP-EVEEVDLKIDEKDLRIDVYRSSGPGGQSVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG+VV Q E+SQHKNK++A +LRA+LY LE QK E+ I + K++IG G Sbjct: 245 RITHIPTGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKIEDE--ISKMRKSQIGSGD 302 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 +IR+Y + D R N+ ++ +GDLD+F+ A +A + Sbjct: 303 RSERIRTYNFL-QSRITDHRINMTLYRLEHIMKEGDLDEFVDALIADDQ 350 >gi|86570230|gb|ABD04787.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodopseudomonas palustris HaA2] Length = 373 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 106/349 (30%), Positives = 172/349 (49%), Gaps = 16/349 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72 D + + L + + + RE L+ + +E++D L D L Sbjct: 21 LDVLLAHHASLEAQLLGEVAAND---YVRITRELSELNPLVEAVKAYREVRDELGDIDDL 77 Query: 73 LELALEEDDCSILQETSDN--LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LE + + + E + + ++ + L D + LE+ AG GG E+ Sbjct: 78 LEDPATDPEMRAMAEAERDALDAHREDLIQQIRVALLPKDAMDERNVMLEIRAGTGGDEA 137 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY ++A + + E + +G G K +KG A+ LK E GVHR+ Sbjct: 138 SLFAGDLFRMYEKFAALQGWSVEVISASEGTVGGFKEIIAEVKGRGAFAKLKFESGVHRV 197 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + ++++I D +IDT RA GAGGQHVN T+SA+ Sbjct: 198 QRVPDTETQGRIHTSAATVAVLP-EVEEVDVDIKPDDLKIDTMRAQGAGGQHVNKTESAI 256 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+VV Q RSQHKN+A A N+LR+++Y+ E Q+ + + K ++G G Sbjct: 257 RITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAEQQRID--SARSAERKQKVGSGD 314 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 +IR+Y P V D R N+ V+ G+ L + + A + Sbjct: 315 RSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGEALGELIDALTTEHQ 362 >gi|269958696|ref|YP_003328483.1| peptide chain release factor 1 [Anaplasma centrale str. Israel] gi|269848525|gb|ACZ49169.1| peptide chain release factor 1 [Anaplasma centrale str. Israel] Length = 359 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 125/349 (35%), Positives = 183/349 (52%), Gaps = 14/349 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++ L + DP V + RE L +S ++E Q + L L Sbjct: 7 LEGLCEKFRILKQQLSDPESLG-VQAFVVASREYSDLLPIMSLVEEYQTAQKEIEELEGL 65 Query: 76 ALEEDDCSILQETSDNLQRIK-----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 D + L + K Q L + DS A LE+ AG GG E+ Sbjct: 66 INSTDTDAELVHLAREELYTKQKLIPKLKHQLQLSLLPKDKDDSRSAILEIRAGTGGEEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 + L RMY ++AE++ +K E + I G K A+L I G + + LK E GVHR+ Sbjct: 126 ALFVCDLYRMYIKYAERKSWKVEPIGISTTGIGGYKEASLCIGGKDVFARLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S+ R HTS +++ V P + ++++I E D RID YR+SG GGQ VNTTDSAV Sbjct: 186 QRVPETESSGRLHTSAATVAVLP-EVEEVDLKIDEKDLRIDVYRSSGPGGQSVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG+VV Q E+SQHKNK++A +LRA+LY LE QK E+ I + K++IG G Sbjct: 245 RITHIPTGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKIEDE--ISKMRKSQIGSGD 302 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 +IR+Y + D R N+ ++ +GDLD+F+ A +A + Sbjct: 303 RSERIRTYNFL-QSRITDHRINMTLYRLEHIMKEGDLDEFVDALIADDQ 350 >gi|297181089|gb|ADI17288.1| protein chain release factor a [uncultured alpha proteobacterium HF0070_17D04] Length = 359 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 120/348 (34%), Positives = 180/348 (51%), Gaps = 14/348 (4%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D + R + ++ D E L RE L I ++ D + LA Sbjct: 8 DKVLARRDEVESRLADAASMS-PDELASLSRELFELRPVCEQIDLVRRLEGDRDAAVMLA 66 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQ-----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + E + + ++ L DS +A LEV AG GG E+ Sbjct: 67 EEAADDAEMAEMAQAEIQEIEARLPEEMNSLQLLLLPRDRDDSRNAILEVRAGTGGDEAA 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A+ L MY R+A K ++ E +E+ + G K AT I G + + LK E GVHR+ Sbjct: 127 LFASDLFGMYQRFAAKHGWRFEVMEVSETGIGGYKEATANIAGSDVFARLKFESGVHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P + ++I++ ESD RID +RASG GGQ VNTTDSAVR Sbjct: 187 RVPETEAGGRIHTSAATVAVLP-EAEDVDIDVQESDLRIDVFRASGPGGQSVNTTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIPTG++V Q E+SQHKN+A+A +LRA+LY+ E + + S K ++G G Sbjct: 246 ITHIPTGIMVSQQDEKSQHKNRAKAMKILRARLYDAERARLQAER--AASRKGQVGSGDR 303 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 +IR+Y P V D R N+ V+ G+ LD+ ++A +A + Sbjct: 304 SERIRTYNF-PQGRVTDHRINLTLYKLDKVIAGEALDEVVEALVAEDQ 350 >gi|260435474|ref|ZP_05789444.1| peptide chain release factor 1 [Synechococcus sp. WH 8109] gi|260413348|gb|EEX06644.1| peptide chain release factor 1 [Synechococcus sp. WH 8109] Length = 365 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 101/348 (29%), Positives = 169/348 (48%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + A L + DP + + + + RER L+ + +E+Q + +L Sbjct: 10 LETATASFRNLERQLADPDVAADPKRLESIARERSRLEPLVLDFEELQRLESERDSARQL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130 + + ++E + + E E L D LE+ AGAGG E+ Sbjct: 70 LKDSRGDAAMEELAQDELASLQEQHATLTERLTLALLPRDPRDERSVMLEIRAGAGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY R+++K + +++ + + G + L ++G + Y LK E GVHR+ Sbjct: 130 CLWAGDLARMYERYSQKVGWAVQSMSCTEADLGGFRELILSVRGESVYSQLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P D++E+++ D I T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADAVEVQLDPKDLDISTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ V C QERSQ +N+ +A +LRAKL LE ++ + ++G G Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERALEILRAKL--LEREQAAAAERESSDRRAQVGSGD 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + D R T VL+G L+D + A +A ++ Sbjct: 307 RSEKIRTYNYKD-NRTTDHRLGRNFT-LEPVLEGQLEDLIGACIAEEQ 352 >gi|297180848|gb|ADI17053.1| protein chain release factor a [uncultured alpha proteobacterium HF0010_30A23] Length = 358 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 122/351 (34%), Positives = 183/351 (52%), Gaps = 20/351 (5%) Query: 16 WDNAVQRLSFLNTKTED---PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 + V+R + D P L RE ++ + ++ Q + D Sbjct: 8 LETVVRRHEEIQALLADHPEPGSAD----YTKLTREYAEMNPIVEEMRAFQKSVQDLEDA 63 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGT 128 LA EDD + D + ++ E++ + EADS +A LE+ G GG Sbjct: 64 RALAASEDDADMRAMAEDEARELQAEIDATEQRMKVLLLPRDEADSRNAILEIRPGTGGD 123 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A LL MY R+AE + +K E LE+ + + G+K + I G N + LK E GVH Sbjct: 124 EAGLFAGDLLAMYRRYAELQGWKFEILEMSENDVGGLKEVSAKINGTNVFAALKFESGVH 183 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS +++ V P + ++IEI D RIDT RASGAGGQHVNTTDS Sbjct: 184 RVQRVPMTESGGRIHTSAATVAVLP-EAEDVDIEIKAEDIRIDTMRASGAGGQHVNTTDS 242 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PTG++V Q ++SQH+N+ +A +LRA+LYE + E A + K ++G Sbjct: 243 AVRITHLPTGIIVT-QSQKSQHRNREEAMRVLRARLYEKARE--EANAERAANRKGQVGS 299 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 G +IR+Y P V D R N+ ++ GD L + ++A A + Sbjct: 300 GDRSERIRTYNY-PQGRVSDHRINLTLHKLDRIVAGDGLGEVIEALTAEDQ 349 >gi|167752837|ref|ZP_02424964.1| hypothetical protein ALIPUT_01098 [Alistipes putredinis DSM 17216] gi|167659906|gb|EDS04036.1| hypothetical protein ALIPUT_01098 [Alistipes putredinis DSM 17216] Length = 315 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 118/311 (37%), Positives = 184/311 (59%), Gaps = 11/311 (3%) Query: 50 QHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS 109 + + + + D ++ E E + ++ E + ++L Sbjct: 2 AGIKAWVEEYDAVVKEVEDLRLMPEFVKEGVVTEQELDEQYARAMHRI--EELELRNMLR 59 Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169 + D A +++++GAGGTE+ DWA MLLRMYTRW E +K + L+ GEE G+KS T Sbjct: 60 RDEDRMGAIMDINSGAGGTEALDWAGMLLRMYTRWGEAHGYKVKVLDYQAGEEVGVKSCT 119 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 L +G AYG+LK E GVHR+VR+SP+++N++R T+F+S++V P +DD+IEI ++ +D Sbjct: 120 LEFEGEYAYGYLKSENGVHRMVRLSPFNANNKRQTTFASVFVSPAIDDTIEITVNPADIE 179 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAWNMLR 281 DT+R+SGAGGQ+VN ++AVR+ + P +++ + RSQ N+ A +L+ Sbjct: 180 WDTFRSSGAGGQNVNKVETAVRLRYHGKDADTGEPIEYLIENMETRSQLMNRENAMRILK 239 Query: 282 AKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 +KLY+ EL KR E++K I WG QIRSYV + VKD RT ++ + V+DG Sbjct: 240 SKLYQRELDKRMATQQALEATKKRIEWGSQIRSYVFDD-RRVKDHRTGVQTSDVEGVMDG 298 Query: 342 DLDDFMKATLA 352 DLD+F+KA L Sbjct: 299 DLDEFIKAYLM 309 >gi|256370594|ref|YP_003108419.1| peptide chain release factor 1 [Candidatus Sulcia muelleri SMDSEM] gi|256009386|gb|ACU52746.1| peptide chain release factor 1 [Candidatus Sulcia muelleri SMDSEM] Length = 348 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 107/336 (31%), Positives = 177/336 (52%), Gaps = 7/336 (2%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 + L+ P + +N + +L +E + L I++ ++ + + L ++ + Sbjct: 17 FNSLSKLISTPEIIKNYKKYILLSKEYKFLYKIINYYNNLKKNKTNIKEIENLLKKDSEL 76 Query: 83 SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 L ++ + + E+LL + + N +E+ AG GG E+ + + RMYT Sbjct: 77 LELAFLEKKNLFLEKKKILNKIENLLKKK-NYNKILMELRAGTGGDEACIFVEDIFRMYT 135 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 + ++ +K + L + G G K L I+G N Y LK E GVHR+ RI +S R Sbjct: 136 LYFKELGWKYDILNMQQGSIKGYKEIILEIEGKNVYDKLKFESGVHRVQRIPYTESQGRL 195 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 HTS ++ V P I+I SD + +T++ASGAGGQHVN T+SA+R+THIPTG+V + Sbjct: 196 HTSAITVAVIPENYYKNNIKIVLSDLKRETFKASGAGGQHVNKTESAIRLTHIPTGIVAE 255 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQP 319 CQ+ERSQHKN +A +LRA++Y E +K+ E+ + + K+ I G + IR+Y P Sbjct: 256 CQEERSQHKNYEKAIKVLRARIYNSEFKKKNEL--LSKKRKSLISTGERSEKIRTYNY-P 312 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 V D R N ++G L++ + A ++K Sbjct: 313 QGRVTDHRINKSIYYLDHFMNGKLNEMITALQILEK 348 >gi|227875209|ref|ZP_03993351.1| peptide chain release factor 1 [Mobiluncus mulieris ATCC 35243] gi|269978100|ref|ZP_06185050.1| peptide chain release factor 1 [Mobiluncus mulieris 28-1] gi|307700819|ref|ZP_07637844.1| peptide chain release factor 1 [Mobiluncus mulieris FB024-16] gi|227844114|gb|EEJ54281.1| peptide chain release factor 1 [Mobiluncus mulieris ATCC 35243] gi|269933609|gb|EEZ90193.1| peptide chain release factor 1 [Mobiluncus mulieris 28-1] gi|307613814|gb|EFN93058.1| peptide chain release factor 1 [Mobiluncus mulieris FB024-16] Length = 366 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 105/347 (30%), Positives = 169/347 (48%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++ + + + DP L + A+ + R L + + + D E+ Sbjct: 11 VEPLLEEYAAVEREMSDPDLHSDQSRARRVGRRYAELGRVAAAARAFLEAQDDLEAGREM 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A E+ D + + D+ D +E+ AG GG ES +A Sbjct: 71 AAEDPDFAAELPKLQEAFDTVQAALIEIL--TPRDPDDARDVIMEIKAGEGGEESALFAG 128 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVH 188 L+RMY +AEK + + L + + + G+K A + + LK E GVH Sbjct: 129 DLMRMYQHYAEKMGWAVQILGLTESDLGGVKDAQIAFKAKGNPTPEEGVWAHLKYEGGVH 188 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS + + V P +++ +IEI +D RID YR+SG GGQ VNTTDS Sbjct: 189 RVQRVPVTESQGRIHTSAAGVLVMPEAEETGDIEIDPNDLRIDVYRSSGPGGQSVNTTDS 248 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307 AVRITH+PTG+VV Q E+SQ +NK +LR++L +LE +KRE A +S+ + Sbjct: 249 AVRITHLPTGIVVSMQNEKSQLQNKEAGMRVLRSRLMQLEQEKREAEAAEARASQVRTVD 308 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RT + + VL+G+L +++ + Sbjct: 309 RSERIRTYNF-PENRIADHRTGYKAYNLDAVLNGELAPVIQSAIDAD 354 >gi|167629003|ref|YP_001679502.1| peptide chain release factor 1 [Heliobacterium modesticaldum Ice1] gi|238687991|sp|B0TI71|RF1_HELMI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|167591743|gb|ABZ83491.1| peptide chain release factor 1 [Heliobacterium modesticaldum Ice1] Length = 354 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 172/329 (52%), Gaps = 10/329 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72 + Q+ L DP + Q+ + +++ + + + + + D + Sbjct: 5 LEIIEQKYDELTQLLSDPEIIQDQTRWQRHAKQQAGMTEIVDTFRAYKGVLQGIDDARAM 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L + E E + L R + + + L D + +E+ AG GG E+ Sbjct: 65 LAESDPELQEMASLELDELLARKEELEQRLKVLLLPKDPNDDKNVIIEIRAGTGGEEAAL 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+A+++ ++TE L + + G K +LI+G A+ LK E GVHR+ R Sbjct: 125 FAGDLYRMYSRFADRQGWRTELLSANYTDIGGFKEVIVLIEGQGAFSKLKFESGVHRVQR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S+ R HTS +++ V P + +EIE++ ++ RID + +SGAGGQHVN T+SAVRI Sbjct: 185 VPATESSGRIHTSAATVAVLP-EAEEVEIEVNPNELRIDVFCSSGAGGQHVNKTESAVRI 243 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV CQ E+SQ KN+ +A +LRA+L LE + E+ + + K+ +G G Sbjct: 244 THLPTGIVVSCQDEKSQLKNREKAMRVLRARL--LEKAREEQHGEMASARKSMVGSGDRS 301 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 +IR+Y P V D R + + Sbjct: 302 ERIRTYNF-PQGRVTDHRIGLTLHRLETI 329 >gi|87198313|ref|YP_495570.1| peptide chain release factor 1 [Novosphingobium aromaticivorans DSM 12444] gi|119361571|sp|Q2GBN7|RF1_NOVAD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|87133994|gb|ABD24736.1| bacterial peptide chain release factor 1 (bRF-1) [Novosphingobium aromaticivorans DSM 12444] Length = 354 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 110/344 (31%), Positives = 173/344 (50%), Gaps = 10/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R + L + L + R+ L+ +E+++ + + L L Sbjct: 8 LAQIAARFAELEARLASGTL--EGADFIAASRDYAELEPVARVAEEVREMRGELVSLAAL 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 + +E + + L AD+ A LE+ AG GG E+ +A Sbjct: 66 DDPDMRELADEELARIRAELPEAEHRLAVAMLPRDSADARPAMLEIRAGTGGDEAALFAA 125 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L RMY R+A ++ ++ E + ++ + G K + G + LK E GVHR+ R+ Sbjct: 126 DLFRMYERYAAEQGWRVETISVNANDLGGYKEVVANVAGQGVFAKLKFESGVHRVQRVPV 185 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS +++ V P D +++ I + D +ID YRASGAGGQHVNTTDSAVRITH+ Sbjct: 186 TESGGRIHTSAATVAVLP-EPDEVDVAIEDKDLKIDIYRASGAGGQHVNTTDSAVRITHL 244 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312 P+G+VV CQ ERSQHKNKA+A +LR +LY+ +++ E+ K +G G +I Sbjct: 245 PSGLVVTCQDERSQHKNKAKAMQVLRTRLYD--MRREAAQGAEAEARKAMVGSGDRSERI 302 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIKK 355 R+Y P V D R N+ ++L+G L + + A +A + Sbjct: 303 RTYNF-PQGRVTDHRINLTLHRLPEILEGPGLAELIDALIAEDQ 345 >gi|225552175|ref|ZP_03773115.1| peptide chain release factor 2 [Borrelia sp. SV1] gi|225371173|gb|EEH00603.1| peptide chain release factor 2 [Borrelia sp. SV1] Length = 282 Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats. Identities = 138/280 (49%), Positives = 190/280 (67%), Gaps = 1/280 (0%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + ++ ++ + + S E D+N+A+L +H+GAGGTE+ DW Sbjct: 1 MCEIAENEKDTSGLEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGGTEACDWV 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 ML RMY+R+AE++K+KTE +++ + E GIKS T+ IKG AYG LK E G+HRL+RIS Sbjct: 61 AMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRIS 119 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+D++ +RHTSF+S++V PV+DD IEI I D RIDTYRASGAGGQHVN T SAVRITH Sbjct: 120 PFDADKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITH 179 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 I TG+V Q Q +RSQHKNK A +L+++LYE K +E + +K EI WG QIRS Sbjct: 180 IETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKNKEDEKNKSKQDTKKEISWGNQIRS 239 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 YV QPY +VKD RT E ++ + V+DG++D+F++ L K Sbjct: 240 YVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 279 >gi|58584615|ref|YP_198188.1| peptide chain release factor 1 [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|75497913|sp|Q5GSS8|RF1_WOLTR RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|58418931|gb|AAW70946.1| Protein chain release factor A [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 359 Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 124/348 (35%), Positives = 191/348 (54%), Gaps = 15/348 (4%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + + ++ +++ K E+P E L +E L I I E + L L E Sbjct: 6 NLQDLKRKFNYIERKLENPTNLS-QKEFINLSKEYSELRPIIKIINEYDTLKKEILDLEE 64 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESL------LSGEADSNDAYLEVHAGAGGT 128 + +E+ ++E + K +V Q ++ E DS +A LE+ AG GG Sbjct: 65 IIKDENSEYDIKELAKEEFFEKQKVLLPQVKAKLKLALLPKDEDDSRNAILEIRAGTGGE 124 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A ML RMY ++AE+R +K E + I G K A+ LI G + LK E GVH Sbjct: 125 EAALFAAMLFRMYQKYAERRNWKFEPISISSTGIGGYKEASALINGTEVFARLKFESGVH 184 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S+ R HTS +++ + P + ++ +I E D RID YR+SG GGQ VNTTDS Sbjct: 185 RVQRVPETESSGRLHTSAATVAILP-EVEEVDFKIEEKDLRIDVYRSSGPGGQSVNTTDS 243 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+TH+PT +VV Q E+SQHKNKA+A +LRA+LYE+E QK+E K++IG Sbjct: 244 AVRVTHLPTEMVVIQQDEKSQHKNKAKALKVLRARLYEIERQKKE--IERSTMRKSQIGS 301 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352 G +IR+Y P + D R N+ ++ +G+LD+F++ ++ Sbjct: 302 GDRSERIRTYNF-PQSRITDHRINLTSHQLEQIIKEGELDEFIEVLIS 348 >gi|172040385|ref|YP_001800099.1| peptide chain release factor 1 [Corynebacterium urealyticum DSM 7109] gi|171851689|emb|CAQ04665.1| peptide chain release factor RF-1 [Corynebacterium urealyticum DSM 7109] Length = 371 Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 113/345 (32%), Positives = 178/345 (51%), Gaps = 9/345 (2%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D+ + L + DP L + A+ + + Q L I + + D+ E+ Sbjct: 22 DDILSEYQGLEAQLADPELHNDPKAARRVGKRFQELQPVIQTYERLNTAREDHEAAAEM- 80 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 +D +E + I+ E + +D +E+ +GAGG E+ +A Sbjct: 81 -ASEDAEFAEEATRLEAEIEELQEKLTDLLAPRDPKNGDDIIMEIKSGAGGEEAALFAGE 139 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-----YGWLKGEQGVHRLV 191 L RMY R+AE+ F TE L +++ + G+K T+ I+ + K E GVHR+ Sbjct: 140 LARMYQRYAERHGFATEVLGLNETDLGGVKDMTMSIRSKQPSRDGAWADFKFEGGVHRVQ 199 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R TS + + VYP D+ ++EI E D R+D YR+SG GGQ VNTTDSAVR Sbjct: 200 RVPVTESQGRIQTSAAGVLVYPEPDEVEDVEIDEKDIRVDVYRSSGKGGQGVNTTDSAVR 259 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGR 310 ITH+PTGVVV CQ+ERSQ +N+A+A +L A+L +++ ++ E A G +++ + Sbjct: 260 ITHLPTGVVVTCQKERSQIQNRARAMQVLAARLQQMKEEEAEAEAAEGRAAQIRTMDRSE 319 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + + VLDGDL+ A ++ Sbjct: 320 RIRTYNF-PESRVSDHRIGYKANNLDSVLDGDLESLFAALKEAER 363 >gi|302869596|ref|YP_003838233.1| peptide chain release factor 1 [Micromonospora aurantiaca ATCC 27029] gi|315503942|ref|YP_004082829.1| peptide chain release factor 1 [Micromonospora sp. L5] gi|302572455|gb|ADL48657.1| peptide chain release factor 1 [Micromonospora aurantiaca ATCC 27029] gi|315410561|gb|ADU08678.1| peptide chain release factor 1 [Micromonospora sp. L5] Length = 362 Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 109/350 (31%), Positives = 170/350 (48%), Gaps = 16/350 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L + DP + + A+ + R L E++ D EL Sbjct: 6 LAALLDEYAELERRLADPAIHADQGTARRVGRRYAELVPLHKAAGELEQARADLAAAREL 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A E+ ++ +T E + + D+ D +E+ AG GG ES +A Sbjct: 66 AAEDATFAVEADTIAASLPALEERLAELL--IPRDPHDAKDVIVEIKAGEGGEESALFAG 123 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVH 188 LLRMYTR+AE+ + TE ++ D + G+K +L IK + LK E GVH Sbjct: 124 DLLRMYTRYAERHGWVTEVIDAQDSDLGGVKDVSLAIKSKGVPEGGNGVWSRLKWEGGVH 183 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS + + V P + +++ I ++ RID +R+SG GGQ VNTTDS Sbjct: 184 RVQRVPVTESQGRIHTSAAGVLVLP-EAEDVDVTIDPNELRIDVFRSSGPGGQSVNTTDS 242 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE--- 305 AVRITH+PTG+VV CQ E+SQ +N+ QA +LRA+L L + + A ++ K + Sbjct: 243 AVRITHVPTGIVVSCQNEKSQLQNREQAMRILRARL--LAAAQEQADAAASDARKAQVRT 300 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + +IR+Y P + D R + L G+LD + A + Sbjct: 301 VDRSERIRTYNF-PQNRITDHRIGYTAYNLDLALAGELDGVLDALAEADR 349 >gi|224131216|ref|XP_002321029.1| predicted protein [Populus trichocarpa] gi|222861802|gb|EEE99344.1| predicted protein [Populus trichocarpa] Length = 416 Score = 200 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 105/345 (30%), Positives = 181/345 (52%), Gaps = 17/345 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72 ++A + L+ K DP + N E + L + LD +S K + L D L Sbjct: 58 LESAEKTWKELSVKLGDPDVVSNPSEYQKLAQSVAELDEVVSIFKRFKDCEKMLEDTRAL 117 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQF--ESLLSGEADSNDAYLEVHAGAGGTES 130 + ++D + + +L+ ++ L S D+ + LEV AG GG E+ Sbjct: 118 AKEDGNDEDMAEMIAYEIESLSSELKQLEEKLTVLLLPSDPLDARNILLEVRAGTGGDEA 177 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L+RMY R++E+ +K + + E+ G K+ + +KG + Y LK E GVHR+ Sbjct: 178 GLWAGDLVRMYQRYSEQNSWKVSVISSSEAEKGGYKTYVMEVKGKSVYSKLKYESGVHRV 237 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ + P D +E+ I + + T R+ GAGGQ+VN ++AV Sbjct: 238 QRVPQTEAQGRVHTSTATVAIMP-EVDEVEVVIDPKEYELTTARSGGAGGQNVNKVETAV 296 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ + C +ER+Q +N+ +A +LRAKLYE+++++++E +I K ++G G Sbjct: 297 DLIHKPTGIRIFCTEERTQLQNRNRALQLLRAKLYEIKVREQQE--SIRNQRKMQVGTGA 354 Query: 310 --RQIRSYVLQPYQMVKDLR--TNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y + V D R N E T L GD+++ ++A Sbjct: 355 RAEKIRTYNYKD-NRVTDHRLKVNFELT---SFLAGDIENAVQAC 395 >gi|320528629|ref|ZP_08029782.1| peptide chain release factor 1 [Solobacterium moorei F0204] gi|320130995|gb|EFW23572.1| peptide chain release factor 1 [Solobacterium moorei F0204] Length = 358 Score = 200 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 105/345 (30%), Positives = 168/345 (48%), Gaps = 10/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK---EIQDRLCDNLIL 72 ++ + K D + + L +E+ L + E+ R+ + Sbjct: 8 LSEIEKQYKEIVEKLMDEKVMSDPKLLTKLSKEQARLTQPVEAYHQLLELDSRIAQADEM 67 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L+ E E + ++ +E Q + D +D +E+ GAGG E Sbjct: 68 LKENDPELKEMARMEKDECEPEREVLLERIQHLLVPRDPDDDHDVIMEIRGGAGGDEGNI 127 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AE + +K + LE E G +KG + Y LK E GVHR+ R Sbjct: 128 FAGDLYRMYSKYAESKGWKVQVLEASVSEAGGYTQIIFSVKGTDVYKELKFESGVHRVQR 187 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ P +D+ I D I+T+RASGAGGQH+N TDSAVRI Sbjct: 188 VPKTETQGRIHTSTATVLCQPEAEDTDIE-IDPKDLTIETHRASGAGGQHINKTDSAVRI 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 H+PTG+ V CQ RSQ +N+ A ++RA++Y E KR + G+ + +IG G Sbjct: 247 VHVPTGITVNCQDGRSQIENRETAMRLIRARVY--EELKRIQEEEAGKIRRAKIGTGDRS 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P V D R ++ T +++G LD ++ LA + Sbjct: 305 EKIRTYNY-PQNRVTDHRISLTITQLDRIMEGKLDGVIEGLLAEE 348 >gi|162138527|ref|YP_483698.2| peptide chain release factor 1 [Rhodopseudomonas palustris HaA2] gi|119361590|sp|Q2J423|RF1_RHOP2 RecName: Full=Peptide chain release factor 1; Short=RF-1 Length = 361 Score = 200 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 106/349 (30%), Positives = 172/349 (49%), Gaps = 16/349 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72 D + + L + + + RE L+ + +E++D L D L Sbjct: 9 LDVLLAHHASLEAQLLGEVAAND---YVRITRELSELNPLVEAVKAYREVRDELGDIDDL 65 Query: 73 LELALEEDDCSILQETSDN--LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 LE + + + E + + ++ + L D + LE+ AG GG E+ Sbjct: 66 LEDPATDPEMRAMAEAERDALDAHREDLIQQIRVALLPKDAMDERNVMLEIRAGTGGDEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY ++A + + E + +G G K +KG A+ LK E GVHR+ Sbjct: 126 SLFAGDLFRMYEKFAALQGWSVEVISASEGTVGGFKEIIAEVKGRGAFAKLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + ++++I D +IDT RA GAGGQHVN T+SA+ Sbjct: 186 QRVPDTETQGRIHTSAATVAVLP-EVEEVDVDIKPDDLKIDTMRAQGAGGQHVNKTESAI 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+VV Q RSQHKN+A A N+LR+++Y+ E Q+ + + K ++G G Sbjct: 245 RITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAEQQRID--SARSAERKQKVGSGD 302 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 +IR+Y P V D R N+ V+ G+ L + + A + Sbjct: 303 RSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGEALGELIDALTTEHQ 350 >gi|242050470|ref|XP_002462979.1| hypothetical protein SORBIDRAFT_02g035755 [Sorghum bicolor] gi|241926356|gb|EER99500.1| hypothetical protein SORBIDRAFT_02g035755 [Sorghum bicolor] Length = 363 Score = 200 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 120/337 (35%), Positives = 198/337 (58%), Gaps = 4/337 (1%) Query: 1 MKLS-RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59 ++L+ ++N + + + ++ L K+ D LW + +A+ ++ + + + + Sbjct: 27 VELALERVNEVRQSAGLEQLEEDIASLEKKSADSSLWDDPSKAQEILVSLTEVKDRVKLL 86 Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSGEADSNDA 117 + + ++ + +++L E D + ++ + LLSG D A Sbjct: 87 NDFKLQVEEAETIVKLTEELDSIDTGLLEEASKIIKALNKALDNFEMTQLLSGPYDKEGA 146 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 + + AGAGGT++QDWA+MLLRMY RW EK+++KT +E GEEAGIKSAT+ ++G A Sbjct: 147 VINISAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSATVELEGRYA 206 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRAS 236 YG++ GE+G HR+VR SP+++ R TSF+ + V P+ ++S+ ++I E D I RA Sbjct: 207 YGYISGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESMAVDIPEEDLDISFTRAG 266 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQ+VN ++AVR+ HIPTG+ V+C +ERSQ NK +A N L+AKL + ++R Sbjct: 267 GKGGQNVNKVETAVRMVHIPTGIAVRCSEERSQLANKIKALNRLKAKLLVIAEEQRASEI 326 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 + WG+QIR+YV PY++VKD+RT E + Sbjct: 327 KQIRGDMVKAEWGQQIRNYVFHPYKLVKDVRTGCETS 363 >gi|313678884|ref|YP_004056624.1| peptide chain release factor 1 [Mycoplasma bovis PG45] gi|312950243|gb|ADR24838.1| peptide chain release factor 1 [Mycoplasma bovis PG45] Length = 358 Score = 200 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 108/343 (31%), Positives = 171/343 (49%), Gaps = 5/343 (1%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 Q L K +DP + N+ E + +E + ++ L D + Sbjct: 9 LSEIKQSYLELLKKVDDPAVINNIKEYSAINKEIAKIREISEKFITYENLLKDVEQAKLM 68 Query: 76 ---ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 +E+ +N +++ E + L E D + +E+ AGG E+ Sbjct: 69 LESKSDEEVEFAKMIIDENSLKLEELEEKLKILILPQDENDDKNIIVEIRGAAGGDEANI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY ++A++ F+ + L + G IKG AY K E GVHR+ R Sbjct: 129 FAGDLFRMYNKFADELGFRLKILSTNSANAGGFSQIVFSIKGEKAYSKFKFESGVHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS +++ V P +DD+++IEI SD +ID +R+SGAGGQ VNTTDSAVRI Sbjct: 189 VPVTESQGRIHTSTTTVTVMPEIDDTVDIEIKPSDLKIDVFRSSGAGGQSVNTTDSAVRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 TH+PT +VV Q ERSQ N+ A +L++KLY+LE+QK+ + + +I Sbjct: 249 THLPTNIVVTSQDERSQIANRETALTILKSKLYDLEMQKKADEESGYRKLAGHGDRSEKI 308 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R+Y P V D R + + +++G L ++A LA ++ Sbjct: 309 RTYNY-PQDRVTDHRISFSTS-LKPIMEGKLTPIVEALLAEEQ 349 >gi|322379189|ref|ZP_08053581.1| peptide chain release factor 1 [Helicobacter suis HS1] gi|322379995|ref|ZP_08054263.1| peptide chain release factor 1 [Helicobacter suis HS5] gi|321147584|gb|EFX42216.1| peptide chain release factor 1 [Helicobacter suis HS5] gi|321148391|gb|EFX42899.1| peptide chain release factor 1 [Helicobacter suis HS1] Length = 352 Score = 200 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 109/345 (31%), Positives = 173/345 (50%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 V R L P + +V L +E+ L+ K L L Sbjct: 6 LKEVVARYDALALCLTQPEVLNDVKRLTELSKEQASLEELAQAAKRYLKILDQIQENKAL 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ + +E +L+ + + + DS + YLE+ AG GG E+ + Sbjct: 66 LEDKELGELAKEELKSLEEQSKNLGDHIKILLIPKDPNDSKNIYLELRAGTGGDEAGIFV 125 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L R Y R+A+ +++K E + + G K LIKG Y LK E G HR+ R+ Sbjct: 126 GDLFRTYCRYADLKRWKVEIVSSSENSVGGYKEMIALIKGQGVYSRLKFEAGTHRVQRVP 185 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P D +EI I+ SD RI+ +RA G GGQ VNTTDSAVRITH Sbjct: 186 ETESQGRIHTSAITVAIMP-EADDVEININPSDLRIEVFRAGGHGGQCVNTTDSAVRITH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+ V Q E+SQHKN+ +A +L+A+LYE +++++++ K ++G G + Sbjct: 245 IPTGISVSMQDEKSQHKNRDKALKILKARLYEKQIEEQQQ--AHSAERKMQVGSGDRSER 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + D R N+ S +++ G+LD ++ +A + Sbjct: 303 IRTYNY-PQNRLSDHRINLTLYSLEELMLSGNLDPVIEPLIAHAQ 346 >gi|85375680|ref|YP_459742.1| peptide chain release factor 1 [Erythrobacter litoralis HTCC2594] gi|122543160|sp|Q2N5U6|RF1_ERYLH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|84788763|gb|ABC64945.1| protein chain release factor A [Erythrobacter litoralis HTCC2594] Length = 355 Score = 200 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 113/344 (32%), Positives = 173/344 (50%), Gaps = 11/344 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R + L + L E R+ L+ E++ + L E+ Sbjct: 8 LDQIANRFAELEARMASGTL--EGEEFVQASRDYAELEPVAKVAAEVKAMREEIGGLEEM 65 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + ++ QE ++ + L AD+ A LE+ AG GG E+ +A Sbjct: 66 LADPEMKAMAQEELAAIREALPEKERQLAIAMLPKDSADNKPAMLEIRAGTGGDEAALFA 125 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+A ++ +K E + ++ E G K + G + LK E GVHR+ R+ Sbjct: 126 GDLYRMYERFAGEQGWKVEPVSMNASEVGGFKEIVANVSGTGVFAKLKFESGVHRVQRVP 185 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P D ++++I + D +ID YRASGAGGQHVNTTDSAVRITH Sbjct: 186 ETESGGRIHTSAATVAVLP-EPDEVDVQIDDKDLKIDIYRASGAGGQHVNTTDSAVRITH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VVQ Q ERSQHKNKA+A +LR +LY+ ++ + + K +G G + Sbjct: 245 LPTGIVVQQQDERSQHKNKAKAMQVLRTRLYDHLREQSQGE--EAAARKAMVGSGDRSER 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIK 354 IR+Y P V D R + +++ G L + + A +A Sbjct: 303 IRTYNF-PQGRVTDHRIGLTLHKLDEIIAGPGLGELVGALIAED 345 >gi|75674575|ref|YP_316996.1| peptide chain release factor 1 [Nitrobacter winogradskyi Nb-255] gi|119361570|sp|Q3SVP7|RF1_NITWN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|74419445|gb|ABA03644.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrobacter winogradskyi Nb-255] Length = 358 Score = 200 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 104/349 (29%), Positives = 170/349 (48%), Gaps = 16/349 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + R + L ++ + + RE L+ + +K + + + + Sbjct: 7 LDLLLARHAALESELLS---HVSADRYVQMTRELAELNPIVDAVKNWRAVTAEIAGIDAM 63 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130 + + ++ ++ + + + + D + LEV AG GG E+ Sbjct: 64 IADPATDAEMRAMAEAERPALEARNDELMQKIRVALLPKDAMDERNVMLEVRAGTGGDEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A + +K E + +G G K ++G AY +K E GVHR+ Sbjct: 124 SLFAGDLFRMYERFAALQGWKVEVISASEGTMGGYKEIVAQVQGRGAYARMKFESGVHRV 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + ++++I D RI+T RA GAGGQHVN T+SA+ Sbjct: 184 QRVPDTEAQGRVHTSAATVAVLP-EAEEVDVDIRPDDLRIETMRAQGAGGQHVNKTESAI 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG+VV Q RSQHKN+A A N+LR+++Y+ E Q+ A K ++G G Sbjct: 243 RITHIPTGIVVSMQDSRSQHKNRASAMNILRSRIYDAERQRIN--AARSADRKDQVGSGD 300 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 +IR+Y P V D R N+ V+ GD L + + A + Sbjct: 301 RSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGDALHELIDALTTEHQ 348 >gi|148272337|ref|YP_001221898.1| peptide chain release factor 1 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|166223547|sp|A5CQ48|RF1_CLAM3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|147830267|emb|CAN01201.1| peptide chain release factor RF-1 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 359 Score = 200 bits (507), Expect = 4e-49, Method: Composition-based stats. Identities = 106/346 (30%), Positives = 168/346 (48%), Gaps = 14/346 (4%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 ++ L + DP L + ++ + R L ++ E D ELA Sbjct: 7 QLLEEHEELQQQLGDPELHADASRSRKVNRRYAELSRIVAAHAEWTQLGDDLAAARELAE 66 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 E+ + + E + + D+ D +E+ G GG ES +A L Sbjct: 67 EDPAFADEIPGLEQALD--AAQEKLRRLLIPRDPDDARDVIMEIKMGEGGAESALFAADL 124 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA------YGWLKGEQGVHRLV 191 LRMY +AE R++KTE L + G K + IKG + + LK E GVHR+ Sbjct: 125 LRMYLHYAESRRWKTEVLSQTQSDLGGYKDVQVAIKGTSDDPALGVWAHLKYEGGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS + + V P V++ E+ I +D +ID YR+SG GGQ VNTTDSAVR Sbjct: 185 RVPATESQGRIHTSAAGVLVIPEVEEVEEVAIDPNDLKIDVYRSSGPGGQSVNTTDSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GW 308 ITH+PTG+VV Q E+SQ +N+ +LRA++ + ++ + A+ +++I Sbjct: 245 ITHLPTGIVVAMQNEKSQLQNREAGMRVLRARVLAKQQEEIDAEASAV--RRSQIRTMDR 302 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RT + + V+DG LD +++ + Sbjct: 303 SERIRTYNF-PENRIADHRTGYKAYNLDAVMDGALDPVVESCIQAD 347 >gi|16331171|ref|NP_441899.1| peptide chain release factor 2 [Synechocystis sp. PCC 6803] gi|1653665|dbj|BAA18577.1| peptide chain release factor [Synechocystis sp. PCC 6803] Length = 288 Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats. Identities = 136/281 (48%), Positives = 195/281 (69%), Gaps = 1/281 (0%) Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 +EL EDD ++L E L++++ E++ + + LLSG D+ A L ++AGAGGT++QD Sbjct: 1 MELLELEDDQALLTEAETTLEQLQKELDRWELQQLLSGPYDAKGATLTINAGAGGTDAQD 60 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA MLLRMYTRW+EK+ +K EI +G+EAG+KS TL I+G AYG+LK E+G HRLVR Sbjct: 61 WAEMLLRMYTRWSEKQGYKVHLAEISEGDEAGLKSVTLEIEGRYAYGYLKSEKGTHRLVR 120 Query: 193 ISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 ISP+++N +R TSF+ + V P+ +++I ++I + D I T RA G GGQ+VN ++AVR Sbjct: 121 ISPFNANGKRQTSFAGVEVMPLLGEEAISLDIPDKDLDISTSRAGGKGGQNVNKVETAVR 180 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 I H+PTG+ V+C QERSQ +NK +A +L+AKL + ++R + E WG Q Sbjct: 181 IVHLPTGLAVRCTQERSQLQNKEKALAILKAKLLIVLEEQRAQAIAEIRGDMVEAAWGTQ 240 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IR+YV PYQ+VKDLRTN+E T V+DG+L DF++A L Sbjct: 241 IRNYVFHPYQLVKDLRTNVETTDVGGVMDGELSDFIEAYLR 281 >gi|227495018|ref|ZP_03925334.1| peptide chain release factor 1 [Actinomyces coleocanis DSM 15436] gi|226831470|gb|EEH63853.1| peptide chain release factor 1 [Actinomyces coleocanis DSM 15436] Length = 369 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 109/345 (31%), Positives = 175/345 (50%), Gaps = 12/345 (3%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 ++ + + DP + + + + L + L + + D E+A Sbjct: 14 LLEEYAQVEASLADPEVLADRTQQRKLAKRFSELSVIKNAADALSMAADDLEAAKEMAK- 72 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 +D S E + ++ + AD+++ LE+ AG GG ES +A L Sbjct: 73 -EDSSFAAEIPEMEVALEAAHARLVKILIPRDPADADNVILEIKAGEGGEESALFAAELA 131 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLV 191 RMYTR+AE + +K + L G+K +L I + LK E GVHR+ Sbjct: 132 RMYTRYAETKGWKVKELSSTYTGLGGVKEVSLSIAAKSDVAPEDGVWAHLKFEGGVHRVQ 191 Query: 192 RISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS + V P DD+ ++ I ++D RID +R+SG GGQ VNTTDSAV Sbjct: 192 RVPVTESQGRIHTSAVGVLVTPEVEDDTEDLVIDQNDLRIDVFRSSGPGGQSVNTTDSAV 251 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITHIPTGVVV Q E+SQ +NK A +LR++L +LE +K+E A+ +S+ + Sbjct: 252 RITHIPTGVVVSMQNEKSQLQNKEAAMRVLRSRLIQLEREKKEAEASAMRASQVRTVDRS 311 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RT + + + VL+G+L +++ + ++ Sbjct: 312 ERIRTYNF-PENRIADHRTGYKAYNLATVLEGELGPVIESAIVLE 355 >gi|157964580|ref|YP_001499404.1| peptide chain release factor 1 [Rickettsia massiliae MTU5] gi|166977368|sp|A8F1S1|RF1_RICM5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|157844356|gb|ABV84857.1| Peptide chain release factor RF-1 [Rickettsia massiliae MTU5] Length = 361 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 123/347 (35%), Positives = 185/347 (53%), Gaps = 16/347 (4%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + + + L K + + E +E L++ ++ IKE + Sbjct: 6 NLAKILDKYENLGNKLSS-GIMGD--EFVKASKEYAELEDVVAKIKEYNKAKSELEEANN 62 Query: 75 LALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LE + E ++ + L +ADS A +EV AG+GG E Sbjct: 63 FKLEVGLDNATLEMIEDEIHTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGGEE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A +L MY R+AE + ++ E L I D G K A+ IKG + + LK E GVHR Sbjct: 123 AALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS +++ V P + ++I+I + D RIDTYRASGAGGQHVNTTDSA Sbjct: 183 VQRVPETESQGRIHTSAATVAVLP-EAEEVDIQIEDKDLRIDTYRASGAGGQHVNTTDSA 241 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG+ V Q E+SQHKNKA+A +LRA++YE E + ++ +S + ++G G Sbjct: 242 VRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERR--KKEQERADSRRGQVGSG 299 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352 +IR+Y P V D R N+ +V+ +G LD+F++A +A Sbjct: 300 DRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345 >gi|216263966|ref|ZP_03435960.1| peptide chain release factor 1 [Borrelia afzelii ACA-1] gi|215980010|gb|EEC20832.1| peptide chain release factor 1 [Borrelia afzelii ACA-1] Length = 357 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 125/342 (36%), Positives = 196/342 (57%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72 ++ R+ + K +D +L +N + +++E +L+ + + I +++ DN + Sbjct: 6 LNSVTSRIKSIEEKLQDINLIKNQKKYSKIIKEYTYLEKINTKKIEYENILNQINDNKTI 65 Query: 73 LELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LE +++ ++++ +L + K + L E DS + +E+ AG GG E+ Sbjct: 66 LEKEEQQEMKELIKQELIDLDKKKENLEHEIKILLLPQDENDSKNIIIEIRAGTGGEEAA 125 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +AN L MY +++EK+K+KTE + ++ E G K IKG + + LK E GVHR+ Sbjct: 126 LFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +SN R TS +++ V P ++++ I+E D RID YR+SGAGGQHVNTTDSAVR Sbjct: 186 RIPITESNGRLQTSAATVAVLPNIEETEID-INEKDLRIDVYRSSGAGGQHVNTTDSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VVQCQ ERSQHKNK QA +LRA+LYE E K++E + K ++G G Sbjct: 245 ITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSNNRKQQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P + D R NI + + G+LD + Sbjct: 303 SERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDQLLDPL 343 >gi|220906439|ref|YP_002481750.1| peptide chain release factor 1 [Cyanothece sp. PCC 7425] gi|254790876|sp|B8HXV0|RF1_CYAP4 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|219863050|gb|ACL43389.1| peptide chain release factor 1 [Cyanothece sp. PCC 7425] Length = 364 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 100/348 (28%), Positives = 173/348 (49%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + L + DP + + E + + + R L+ + + ++ Sbjct: 10 LKSVELTFHELTRRLADPEVATDPEEFQRVAKARASLEETVDTYDTWKTVQQHLAEARQI 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130 A E LQE + E + L D + LE+ AG GG E+ Sbjct: 70 AREAASDPELQEMAVQEVNELTEKSAHLEQRLKILLLPRDPNDDKNIMLEIRAGTGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L+R+Y+R+AE ++++ + + GE G K A L I+G Y LK E GVHR+ Sbjct: 130 SIWAGDLVRLYSRYAESQRWRVKLVSESLGEMGGFKEAILEIQGEQVYSKLKYEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +++ R HTS +++ + P D +E++I D + T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPATEASGRVHTSTATVAIMP-EVDEVEVKIDPKDIELTTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ + C +ERSQ +NK +A +LRAKLYE++LQ+++ I ++++G G Sbjct: 249 DLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMKLQEQQSE--ITSRRRSQVGTGS 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + D R + + VL+GD++ ++A + + Sbjct: 307 RSEKIRTYNYKD-NRATDHRLG-QNFPLNQVLEGDIEGIIQACITQDQ 352 >gi|29348961|ref|NP_812464.1| peptide chain release factor RF-2 [Bacteroides thetaiotaomicron VPI-5482] gi|29340868|gb|AAO78658.1| peptide chain release factor RF-2 [Bacteroides thetaiotaomicron VPI-5482] Length = 319 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 122/315 (38%), Positives = 186/315 (59%), Gaps = 11/315 (3%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ + L I E++ + L +++ + + VE + + Sbjct: 1 MKLVKDLQKWIDGYNEVKTLADELE--LSFDFYKEELVTEGDVDAAYAKASEAVEALELK 58 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++L EAD L++++GAGGTESQDWA+ML+RMY R+AE +K + +G+EAGI Sbjct: 59 NMLRDEADQMACVLKINSGAGGTESQDWASMLMRMYLRYAETNGYKATIANLQEGDEAGI 118 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ T+ I+G AYG+LKGE GVHRLVR+SPY++ +R TSF+S++V P+VDDSIE+ I Sbjct: 119 KTCTINIEGDFAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNILP 178 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAW 277 + DT+R+ GAGGQ+VN +S VR+ + ++++ + R Q KN+ A Sbjct: 179 ACISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNRENAM 238 Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 LR+ LY+ ELQ R E+ K +I WG QIRSYV + VKD RTN + + + Sbjct: 239 RQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNG 297 Query: 338 VLDGDLDDFMKATLA 352 V+DG +++F+KA L Sbjct: 298 VMDGKIEEFIKAYLM 312 >gi|282898327|ref|ZP_06306318.1| Peptide chain release factor 1 [Raphidiopsis brookii D9] gi|281196858|gb|EFA71763.1| Peptide chain release factor 1 [Raphidiopsis brookii D9] Length = 364 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 99/348 (28%), Positives = 178/348 (51%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + Q L + DP ++ E + + + R L+ ++ + ++ + + ++ Sbjct: 10 LKSVEQTFHELTRRLADPDTAKSPDEYQKIAKSRSSLEEVVTAYETWKNSQEELVGARQI 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130 E + L E + + + L D + LE+ AG GG E+ Sbjct: 70 LKESNGDPELHEMATIEVKDLESKIEHLEEQLKILLLPRDPNDEKNIMLEIRAGTGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA LLRMY+R+A+ + +K + + GE G K L I+G + Y LK E GVHR+ Sbjct: 130 SIWAGDLLRMYSRYADTQGWKVKLVSESPGEMGGFKEVILEIQGNSVYSKLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ + P D +E+ I D + T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPATEAGGRVHTSTATVAIMP-EVDDVEVHIDPKDIEMTTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ + C +ERSQ +NK +A +LRAKLYE++L++++E + ++++G G Sbjct: 249 DLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQQE--AVTSMRRSQVGTGS 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + D R + + S VL+GDL+ +++ ++ + Sbjct: 307 RSEKIRTYNYKD-SRATDHRLG-QNFTLSPVLEGDLEILIQSCISQDQ 352 >gi|83592089|ref|YP_425841.1| peptide chain release factor 1 [Rhodospirillum rubrum ATCC 11170] gi|119361593|sp|Q2RWE1|RF1_RHORT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|83575003|gb|ABC21554.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodospirillum rubrum ATCC 11170] Length = 354 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 123/346 (35%), Positives = 171/346 (49%), Gaps = 11/346 (3%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + V R L + RE L + I + D + Sbjct: 6 NLSRVVARHDELRALLSTSA--GGGEGFVRMSRELADLAPVVEAIGRLDDAKAELAGARA 63 Query: 75 LALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 L + D +E I + L EAD LEV AG GG E+ + Sbjct: 64 LLDDPDMRDLAREEVLRLEAEIPALEHGVKLLLLPRDEADDRGVILEVRAGTGGDEAALF 123 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A LLRMY R+A++R ++ E +E D + GIK A+ I G + LK E GVHR+ R+ Sbjct: 124 AGDLLRMYERYAQERGWRFEVMEASDTDIGGIKEASAAISGRGVFARLKFESGVHRVQRV 183 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 + R HTS +++ V P + +++EI E D RIDTYR+ GAGGQHVNTTDSAVRIT Sbjct: 184 PVTEGGGRIHTSAATVAVLP-EAEEVDVEIEEKDLRIDTYRSQGAGGQHVNTTDSAVRIT 242 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H+P+GVV QCQ E+SQHKNKA+A MLR KLY+ Q E+ + ++G G Sbjct: 243 HLPSGVVAQCQDEKSQHKNKAKAMRMLRTKLYDHARQ--TADDARAEARRVQVGSGDRSE 300 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIKK 355 +IR+Y P V D R + +VL G LD+ ++ +A + Sbjct: 301 RIRTYNF-PQGRVTDHRIGLTLHRLPEVLAGTALDEVIEPLIAEDQ 345 >gi|282899982|ref|ZP_06307943.1| Peptide chain release factor 1 [Cylindrospermopsis raciborskii CS-505] gi|281195252|gb|EFA70188.1| Peptide chain release factor 1 [Cylindrospermopsis raciborskii CS-505] Length = 364 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 98/348 (28%), Positives = 177/348 (50%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + Q L + DP ++ E + + + R L+ + + ++ + + ++ Sbjct: 10 LKSVEQTFHELTRRLADPDTAKSPDEYQKIAKSRSSLEEVVIAYETWKNSQEELVGARQI 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130 E + L E + + + L D + LE+ AG GG E+ Sbjct: 70 LKESNGDPELHEMATMEVKDLENKIEHLEEQLKILLLPRDPNDEKNIMLEIRAGTGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA LLRMY+R+A+ + ++ + + GE G K L I+G + Y LK E GVHR+ Sbjct: 130 SIWAGDLLRMYSRYADTQGWRVKLVSESPGEMGGFKEVILEIQGDSVYSKLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ + P D +E+ I D + T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPATEAGGRVHTSTATVAIMP-EVDDVEVHIDPKDIEMTTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ + C +ERSQ +NK +A +LRAKLYE++L++++E + ++++G G Sbjct: 249 DLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQQE--AVTSMRRSQVGTGS 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + D R + + S VL+GDL+ +++ ++ + Sbjct: 307 RSEKIRTYNYKD-SRATDHRLG-QNFTLSPVLEGDLETLIQSCISQDQ 352 >gi|224533030|ref|ZP_03673636.1| peptide chain release factor 2 [Borrelia burgdorferi WI91-23] gi|224512024|gb|EEF82419.1| peptide chain release factor 2 [Borrelia burgdorferi WI91-23] Length = 269 Score = 199 bits (506), Expect = 5e-49, Method: Composition-based stats. Identities = 138/267 (51%), Positives = 186/267 (69%), Gaps = 1/267 (0%) Query: 88 TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 ++ + + S E D+N+A+L +H+GAGGTE+ DW ML RMY+R+AE+ Sbjct: 1 MEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGGTEACDWVAMLYRMYSRYAER 60 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 +K+KTE +++ + E GIKS T+ IKG AYG LK E G+HRL+RISP+D+ +RHTSF+ Sbjct: 61 KKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRISPFDAAKKRHTSFA 119 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 S++V PV+DD IEI I D RIDTYRASGAGGQHVN T SAVRITHI TG+V Q Q +R Sbjct: 120 SVFVDPVIDDKIEITIKPEDIRIDTYRASGAGGQHVNKTSSAVRITHIETGIVTQSQSDR 179 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQHKNK A +L+++LYE K +E + +K EI WG QIRSYV QPY +VKD R Sbjct: 180 SQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGNQIRSYVFQPYNLVKDHR 239 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354 T E ++ + V+DG++D+F++ L K Sbjct: 240 TKFENSNTTSVMDGNIDNFIEEYLKWK 266 >gi|170781877|ref|YP_001710209.1| peptide chain release factor 1 [Clavibacter michiganensis subsp. sepedonicus] gi|189039963|sp|B0RAQ5|RF1_CLAMS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|169156445|emb|CAQ01593.1| peptide chain release factor 1 (RF-1) [Clavibacter michiganensis subsp. sepedonicus] Length = 359 Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats. Identities = 105/346 (30%), Positives = 167/346 (48%), Gaps = 14/346 (4%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 ++ L + DP L + ++ + R L ++ E D ELA Sbjct: 7 QLLEEHEELQQQLGDPELHADASRSRKVNRRYAELSRIVAAHAEWTQLGDDLAAARELAE 66 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 E+ + E + + D+ D +E+ G GG ES +A L Sbjct: 67 EDPAFVDEIPGLEEQLD--QAQEKLRRLLIPRDPDDARDVIMEIKMGEGGAESALFAADL 124 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA------YGWLKGEQGVHRLV 191 LRMY +AE R++KTE L + G K + IKG + + LK E GVHR+ Sbjct: 125 LRMYLHYAESRRWKTEVLSQTQSDLGGYKDVQVAIKGTSDDPALGVWAHLKYEGGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS + + V P V++ E+ + +D +ID YR+SG GGQ VNTTDSAVR Sbjct: 185 RVPATESQGRIHTSAAGVLVIPEVEEVEEVPLDPNDLKIDVYRSSGPGGQSVNTTDSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GW 308 ITH+PTG+VV Q E+SQ +N+ +LRA++ + ++ + A+ +++I Sbjct: 245 ITHLPTGIVVAMQNEKSQLQNREAGMRVLRARVLAKQQEEIDAEASAV--RRSQIRTMDR 302 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RT + + V+DG LD +++ + Sbjct: 303 SERIRTYNF-PENRIADHRTGYKAYNLDAVMDGALDPVVESCIQAD 347 >gi|269794320|ref|YP_003313775.1| peptide chain release factor 1 [Sanguibacter keddieii DSM 10542] gi|269096505|gb|ACZ20941.1| bacterial peptide chain release factor 1 (bRF-1) [Sanguibacter keddieii DSM 10542] Length = 361 Score = 199 bits (506), Expect = 6e-49, Method: Composition-based stats. Identities = 114/343 (33%), Positives = 174/343 (50%), Gaps = 11/343 (3%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 + + + + + DP + + A+ L R L ++ + + + D ELA Sbjct: 9 EPLLAEHAEIEQQLADPAVHADAARARTLGRRYAELGQVVAAYRGWRSAVDDAEAAAELA 68 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 EE + E + + D D LE+ AG GG ES +A Sbjct: 69 AEEPAFAEELPALQTAATDAAEKLRRVL--IPRDPDDGRDVILEIKAGEGGEESALFAGD 126 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHR 189 LLRMY R+AE+R +KTE +E + + G K + + + LK E GVHR Sbjct: 127 LLRMYLRYAERRGWKTEVIEATESDLGGYKDVQVAVKAKGTVAPEDGPWANLKYEGGVHR 186 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS + + V+P V+D+ E+EI ++D RID YR+SG GGQ VNTTDSA Sbjct: 187 VQRVPVTESQGRIHTSAAGVLVFPEVEDAGELEIDQNDLRIDVYRSSGPGGQSVNTTDSA 246 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308 VRITH+PTG+VV Q E+SQ +N+ QA +LRA+L ++ AN S+ + Sbjct: 247 VRITHVPTGIVVSMQNEKSQLQNREQAMRVLRARLLAARQEEEAAAANDIRRSQVRTVDR 306 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y P + D RT + + VLDGDL+ +++ + Sbjct: 307 SERIRTYNY-PENRIADHRTGYKSYNLDQVLDGDLEPVVRSAI 348 >gi|255010031|ref|ZP_05282157.1| putative peptide chain release factor [Bacteroides fragilis 3_1_12] Length = 319 Score = 199 bits (505), Expect = 6e-49, Method: Composition-based stats. Identities = 124/315 (39%), Positives = 187/315 (59%), Gaps = 11/315 (3%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ + L I E++ + + + D+ QE + + VE + + Sbjct: 1 MKLVKGLQKWIDGYNEVKTLADELELAFDFYK--DELVTEQEVDEAYAKALEHVENLELQ 58 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++L EAD L++++GAGGTESQDWA+ML+RMY R+AE +K + +G+EAGI Sbjct: 59 NMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYLRYAETNGYKATMANLQEGDEAGI 118 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ T+ I+G AYG+LKGE GVHRLVR+SPY++ +R TSF+S++V P+VDDSIE+ I Sbjct: 119 KTCTIQIEGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNILP 178 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAW 277 + DT+R+ GAGGQ+VN +S VR+ + ++++ + R Q KN+ A Sbjct: 179 ACISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNRENAM 238 Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 LR+ LY+ ELQ R E+ K +I WG QIRSYV + VKD RTN + + + Sbjct: 239 RQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNG 297 Query: 338 VLDGDLDDFMKATLA 352 V+DG ++ F+KA L Sbjct: 298 VMDGKIEGFIKAYLM 312 >gi|150008712|ref|YP_001303455.1| peptide chain release factor 1 [Parabacteroides distasonis ATCC 8503] gi|255014510|ref|ZP_05286636.1| peptide chain release factor 1 [Bacteroides sp. 2_1_7] gi|256841252|ref|ZP_05546759.1| peptide chain release factor 1 [Parabacteroides sp. D13] gi|298375991|ref|ZP_06985947.1| peptide chain release factor 1 [Bacteroides sp. 3_1_19] gi|301311522|ref|ZP_07217449.1| peptide chain release factor 1 [Bacteroides sp. 20_3] gi|166223582|sp|A6LDR9|RF1_PARD8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|149937136|gb|ABR43833.1| peptide chain release factor 1 [Parabacteroides distasonis ATCC 8503] gi|256737095|gb|EEU50422.1| peptide chain release factor 1 [Parabacteroides sp. D13] gi|298267028|gb|EFI08685.1| peptide chain release factor 1 [Bacteroides sp. 3_1_19] gi|300830608|gb|EFK61251.1| peptide chain release factor 1 [Bacteroides sp. 20_3] Length = 369 Score = 199 bits (505), Expect = 6e-49, Method: Composition-based stats. Identities = 93/354 (26%), Positives = 159/354 (44%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V R + T DP + ++ L +E + L+ + E L L Sbjct: 10 LDGLVSRFEEVGTLITDPAVIADMKRFVKLNKEYRDLEKIVGARSEYVKVLNGIEEAKAL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + L + + + + D +A +E+ G GG E+ Sbjct: 70 LESEQDPEMREMAREELDTCNERIPALEEEIKLLLVPADPQDDKNAIVEIRGGTGGDEAA 129 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY ++ E + +K +G G K + G YG LK E GVHR+ Sbjct: 130 LFAGDLYRMYVKYCELKGWKISVSSFSEGSSGGFKEIIFTVSGEKVYGTLKYESGVHRVQ 189 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P D+ I+E + + DT+R+ GAGGQ+VN +S VR Sbjct: 190 RVPATETQGRVHTSAATVAVLPEADEFDVE-INEGEIKWDTFRSGGAGGQNVNKVESGVR 248 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + ++ ++++C + R Q KNK +A LR+ +Y+ E QK + +I K Sbjct: 249 LRYVWKNPITGVSEEILIECTETRDQPKNKERALTRLRSFIYDKEHQKYLD--DIASKRK 306 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 T + G + IR+Y P + D R N + S +DG++ D + + + Sbjct: 307 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDGEIQDCLDHLIVAE 359 >gi|189025285|ref|YP_001933057.1| peptide chain release factor 1 [Treponema pallidum subsp. pallidum SS14] gi|238689313|sp|B2S1Z9|RF1_TREPS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189017860|gb|ACD70478.1| peptide chain release factor 1 [Treponema pallidum subsp. pallidum SS14] gi|291059466|gb|ADD72201.1| peptide chain release factor 1 [Treponema pallidum subsp. pallidum str. Chicago] Length = 351 Score = 199 bits (505), Expect = 6e-49, Method: Composition-based stats. Identities = 106/342 (30%), Positives = 169/342 (49%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L + E+P L+ + + MR+ +L + L Sbjct: 5 LEELRAQWRKLQQEVENPSLFSSTQSYRERMRDHAYLSRLMEEYDRYLLTEKQLEDAHVL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQF----ESLLSGEADSNDAYLEVHAGAGGTESQ 131 +E D ++ ++ + Q + + +E+ G GG E+ Sbjct: 65 IQDESDADFKDVIRQEIRTLEAALHTSQKRLKTLLIPPDPLQEKNIIMEIRGGTGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYT +AE ++++ E L + + E G K T I G + YG L+ E GVHR+ Sbjct: 125 LFAADLFRMYTHYAESKQWRYEVLAVSETELGGFKEITFSISGRDVYGSLRYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +++ R HTS ++ V P ++++ I D R+D RASG GGQ VNTTDSAVR Sbjct: 185 RVPSTEASGRIHTSAVTVAVLPEMEETEVD-IRAEDVRVDVMRASGPGGQCVNTTDSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV CQ E+SQ KNKA+A +LR+++Y+LE KR+ K+++G G Sbjct: 244 LTHLPTGIVVVCQDEKSQIKNKAKAMRVLRSRVYDLEESKRQ--VARARERKSQVGSGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R + V+ G LDD ++ Sbjct: 302 SERIRTYNF-PQNRVTDHRVRVTLYKLDAVMQGALDDIIEPL 342 >gi|15594541|ref|NP_212330.1| peptide chain release factor 1 [Borrelia burgdorferi B31] gi|216264551|ref|ZP_03436543.1| peptide chain release factor 1 [Borrelia burgdorferi 156a] gi|218249543|ref|YP_002374724.1| peptide chain release factor 1 [Borrelia burgdorferi ZS7] gi|221217544|ref|ZP_03589014.1| peptide chain release factor 1 [Borrelia burgdorferi 72a] gi|223889241|ref|ZP_03623829.1| peptide chain release factor 1 [Borrelia burgdorferi 64b] gi|224532854|ref|ZP_03673469.1| peptide chain release factor 1 [Borrelia burgdorferi WI91-23] gi|224534094|ref|ZP_03674677.1| peptide chain release factor 1 [Borrelia burgdorferi CA-11.2a] gi|225549805|ref|ZP_03770769.1| peptide chain release factor 1 [Borrelia burgdorferi 118a] gi|226321514|ref|ZP_03797040.1| peptide chain release factor 1 [Borrelia burgdorferi Bol26] gi|3914620|sp|O51214|RF1_BORBU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|226739097|sp|B7J1C9|RF1_BORBZ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|2688096|gb|AAC66592.1| peptide chain release factor 1 (prfA) [Borrelia burgdorferi B31] gi|215981024|gb|EEC21831.1| peptide chain release factor 1 [Borrelia burgdorferi 156a] gi|218164731|gb|ACK74792.1| peptide chain release factor 1 [Borrelia burgdorferi ZS7] gi|221192607|gb|EEE18824.1| peptide chain release factor 1 [Borrelia burgdorferi 72a] gi|223885274|gb|EEF56376.1| peptide chain release factor 1 [Borrelia burgdorferi 64b] gi|224512243|gb|EEF82629.1| peptide chain release factor 1 [Borrelia burgdorferi WI91-23] gi|224512793|gb|EEF83161.1| peptide chain release factor 1 [Borrelia burgdorferi CA-11.2a] gi|225369613|gb|EEG99062.1| peptide chain release factor 1 [Borrelia burgdorferi 118a] gi|226232703|gb|EEH31456.1| peptide chain release factor 1 [Borrelia burgdorferi Bol26] gi|312148526|gb|ADQ31185.1| peptide chain release factor 1 [Borrelia burgdorferi JD1] Length = 357 Score = 199 bits (505), Expect = 6e-49, Method: Composition-based stats. Identities = 123/347 (35%), Positives = 191/347 (55%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++A ++ + K +D +L ++ + +++E +L+ + E + L + Sbjct: 6 LNSATSKIKLIEEKLQDINLIKDQKKYSKIIKEYTYLEKINTKKIEYEKILSQINDTKTI 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 +ED + + L + + E + L E DS + +E+ AG GG E+ Sbjct: 66 LEKEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGTGGEEAA 125 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +AN L MY +++EK+K+KTE + ++ E G K IKG + + LK E GVHR+ Sbjct: 126 LFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +SN R TS +++ V P ++++ I+E D RID YR+SGAGGQHVNTTDSAVR Sbjct: 186 RIPITESNGRLQTSAATVAVLPNIEETEID-INEKDLRIDVYRSSGAGGQHVNTTDSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VVQCQ ERSQHKNK QA +LRA+LYE E K++E + K ++G G Sbjct: 245 ITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R NI + + G+LD + + + Sbjct: 303 SERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDPLLDPLMIALQ 348 >gi|154248977|ref|YP_001409802.1| peptide chain release factor 1 [Fervidobacterium nodosum Rt17-B1] gi|154152913|gb|ABS60145.1| peptide chain release factor 1 [Fervidobacterium nodosum Rt17-B1] Length = 347 Score = 199 bits (505), Expect = 6e-49, Method: Composition-based stats. Identities = 119/332 (35%), Positives = 176/332 (53%), Gaps = 16/332 (4%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + L + K + +L + E + E I E + L + + + Sbjct: 8 VKKTLEEIEKKMME-NL--ELKEMIKISAEFTKFKEIDELINEYFNLLDEKELWEQEPGS 64 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 ED+ + +I+ L E + +LE+ AG GG E+ +A LL Sbjct: 65 EDE------IAKLDSKIEKISNEIIALLLPDDEFRDRNVFLEIRAGTGGEEAALFAGDLL 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY R++E+ + TE ++ + G K + IKG N+ ++K E+GVHR+ RI +S Sbjct: 119 RMYLRYSERMGWSTEIIDESKSDLGGYKEVVVRIKGKNSGTYMKYERGVHRVQRIPVTES 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R HTS +++ V P +++ I D RIDTYRASGAGGQ+VN T+SA+RITHIPTG Sbjct: 179 GGRIHTSTATVAVLP-EMKDVDVYIDPKDIRIDTYRASGAGGQYVNKTESAIRITHIPTG 237 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSY 315 +VV CQ ERSQH+NK +A +LRAKLYEL ++++E + K +IG G + IR+Y Sbjct: 238 IVVTCQSERSQHQNKEKAMMVLRAKLYELARKEQDE--KLSSQRKNQIGSGERSEKIRTY 295 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 P V D R N+ + VLDGDLD + Sbjct: 296 NF-PQNRVTDHRINLTIYNLQAVLDGDLDLII 326 >gi|67459154|ref|YP_246778.1| peptide chain release factor 1 [Rickettsia felis URRWXCal2] gi|75536414|sp|Q4ULG0|RF1_RICFE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|67004687|gb|AAY61613.1| Peptide chain release factor RF-1 [Rickettsia felis URRWXCal2] Length = 355 Score = 199 bits (505), Expect = 6e-49, Method: Composition-based stats. Identities = 123/347 (35%), Positives = 185/347 (53%), Gaps = 16/347 (4%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + + + L K + + E +E L++ ++ IKE + Sbjct: 6 NLAKILDKYENLGKKLSS-GIMGD--EFVKASKEYAELEDVVAKIKEYNKAKSELEEANN 62 Query: 75 LALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LE + E ++ + L +ADS A +EV AG+GG E Sbjct: 63 FKLEVGLDNATLEMIEDEIHTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGGEE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A +L MY R+AE + ++ E L I D G K A+ IKG + + LK E GVHR Sbjct: 123 AALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS +++ V P + ++I+I + D RIDTYRASGAGGQHVNTTDSA Sbjct: 183 VQRVPETESQGRIHTSAATVAVLP-EAEEVDIKIEDKDLRIDTYRASGAGGQHVNTTDSA 241 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG+ V Q E+SQHKNKA+A +LRA++YE E + ++ +S + ++G G Sbjct: 242 VRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERR--KKEQERADSRRGQVGSG 299 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352 +IR+Y P V D R N+ +V+ +G LD+F++A +A Sbjct: 300 DRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345 >gi|262383596|ref|ZP_06076732.1| peptide chain release factor 1 [Bacteroides sp. 2_1_33B] gi|262294494|gb|EEY82426.1| peptide chain release factor 1 [Bacteroides sp. 2_1_33B] Length = 369 Score = 199 bits (505), Expect = 6e-49, Method: Composition-based stats. Identities = 93/354 (26%), Positives = 159/354 (44%), Gaps = 19/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V R + T DP + ++ L +E + L+ + E L L Sbjct: 10 LDGLVSRFEEVGTLITDPAVIADMKRFVKLNKEYRDLEKIVGARSEYVKVLNGIEEAKAL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E D + + + L + + + + D +A +E+ G GG E+ Sbjct: 70 LESEQDPEMREMAREELDACNERIPALEEEIKLLLVPADPQDDKNAIVEIRGGTGGDEAA 129 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY ++ E + +K +G G K + G YG LK E GVHR+ Sbjct: 130 LFAGDLYRMYVKYCELKGWKISVSSFSEGSSGGFKEIIFTVSGEKVYGTLKYESGVHRVQ 189 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P D+ I+E + + DT+R+ GAGGQ+VN +S VR Sbjct: 190 RVPATETQGRVHTSAATVAVLPEADEFDVE-INEGEIKWDTFRSGGAGGQNVNKVESGVR 248 Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 + ++ ++++C + R Q KNK +A LR+ +Y+ E QK + +I K Sbjct: 249 LRYVWKNPITGVSEEILIECTETRDQPKNKERALTRLRSFIYDKEHQKYLD--DIASKRK 306 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 T + G + IR+Y P + D R N + S +DG++ D + + + Sbjct: 307 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDGEIQDCLDHLIVAE 359 >gi|226226590|ref|YP_002760696.1| peptide chain release factor 1 [Gemmatimonas aurantiaca T-27] gi|226089781|dbj|BAH38226.1| peptide chain release factor 1 [Gemmatimonas aurantiaca T-27] Length = 356 Score = 199 bits (505), Expect = 6e-49, Method: Composition-based stats. Identities = 112/350 (32%), Positives = 177/350 (50%), Gaps = 12/350 (3%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L+ L A+QR + DP ++ L RE L ++ +Q Sbjct: 2 LSHLRDRM--AEALQRAIEVEQLLADPETTKDAPRLAELGREHHRLAQVVARATRLQKAE 59 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEAD--SNDAYLEVHA 123 + ELA +D + ++ ++ + K+ LL A +E+ A Sbjct: 60 QELNEARELANGDDPDFAAEARTEMVRLEEETAVLEKELLPLLIPRDPLDERPAIVEIRA 119 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G GG E+ +A LLRMYTR+ E+R ++ E + +G G+K + + G +G L+ Sbjct: 120 GTGGDEAGLFAGDLLRMYTRFLERRGWRIEPISYSEGTLGGVKESVFKVSGDGVFGVLRW 179 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHR+ R+ +S R HTS +++ V P ++ I + D RID +R+SG GGQ V Sbjct: 180 ESGVHRVQRVPATESQGRIHTSAATVAVLPEAEELDMR-IEDKDLRIDVFRSSGPGGQSV 238 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTTDSAVRITHIPTG+VV Q ++SQ +NKA+A ++LRA+L +L L ++E K Sbjct: 239 NTTDSAVRITHIPTGIVVSQQDQKSQLQNKAKAMDVLRARLLDLRLSEQEAER--SRMRK 296 Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +++ G + IR+Y P V D R + V++G++ F+ A Sbjct: 297 SQVSTGDRSAKIRTYNF-PQGRVTDHRVGLTLYDIDSVMNGEISSFLDAL 345 >gi|225159115|ref|ZP_03725422.1| peptide chain release factor 1 [Opitutaceae bacterium TAV2] gi|224802321|gb|EEG20586.1| peptide chain release factor 1 [Opitutaceae bacterium TAV2] Length = 373 Score = 199 bits (505), Expect = 6e-49, Method: Composition-based stats. Identities = 109/348 (31%), Positives = 167/348 (47%), Gaps = 12/348 (3%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 D +R L+ + P + + A + RE Q + ++ + L + Sbjct: 6 DISLFQRRADELDAQMRSPTFYNDARAAAAVTREHQQVTQLLADHAAHRKTLAEIAEAQA 65 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFE-----SLLSGEADSNDAYLEVHAGAGGTE 129 L + L+E ++ + F + DS D LE+ AG GG E Sbjct: 66 LIKDPSADPDLRELAEAELPELEARRERLFRTVLAGMIPPEPTDSRDTVLEIRAGTGGEE 125 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A L RMY R+AE R + E + E G + + +I+G + Y LK E GVHR Sbjct: 126 AALFAAELARMYHRYAEDRGWTVEPTGSSESERGGFREVSFIIRGQDVYKQLKFESGVHR 185 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ ++N R HTS ++ V P ++I I D I RASG GGQ VNTTDSA Sbjct: 186 VQRVPLTEANGRIHTSTVTVAVLP-EAQEVDIRIDPQDLEITVQRASGPGGQGVNTTDSA 244 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRI H PTG++V C RSQ KNKA A ++LRA+L L+ ++ EE A + +IG G Sbjct: 245 VRIVHKPTGMIVYCADGRSQQKNKASAMSVLRARL--LQRKQDEEAAKYAAQRRGQIGTG 302 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D R + S + V++G L++ ++ + Sbjct: 303 DRSERIRTYNF-PQNRLTDHRIGLTLYSLTQVMEGALNEVVQPLQKAE 349 >gi|319428670|gb|ADV56693.1| peptide chain release factor [Phaseolus vulgaris] Length = 498 Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 104/336 (30%), Positives = 177/336 (52%), Gaps = 17/336 (5%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 K DP + + E + L + LD +S ++ +D LA + + + E Sbjct: 138 KLADPDVVSDPKEYQKLAQSVAELDEVVSIYRKFKDCEKHLEEAKALAKDGGNDEDMVEM 197 Query: 89 SD-----NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 +++ + + L S D+ + +EV AG GG E+ WA L+RMY R Sbjct: 198 ISFEIDLLSKQLAELEDNLKVLLLPSDPLDARNIMIEVRAGTGGDEAGIWAGDLVRMYER 257 Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 ++E+ +K + E+ G K+ + IKG Y LK E GVHR+ R+ ++ R H Sbjct: 258 YSERNSWKYSLVSSSAAEKGGFKTYVMEIKGNRVYSKLKYESGVHRVQRVPLTEAQGRVH 317 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 TS +++ + P D +E+ I D + T R+ GAGGQ+VN ++A+ + H PTG+ + C Sbjct: 318 TSTATVAIMP-EVDEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLVHKPTGIRIFC 376 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320 +ER+Q KNK +A+ +LRAKLYE++L++++E ++ K+++G G +IR+Y + Sbjct: 377 TEERTQLKNKNRAFQLLRAKLYEIKLREQQE--SLRNQRKSQVGTGARAEKIRTYNYKD- 433 Query: 321 QMVKDLR--TNIEKTSPSDVLDGDLDDFMKATLAIK 354 V D R TN E T LDGD++D ++ + + Sbjct: 434 NRVTDHRLKTNYELT---SFLDGDIEDAVQISTKSR 466 >gi|111115018|ref|YP_709636.1| peptide chain release factor 1 [Borrelia afzelii PKo] gi|119361512|sp|Q0SNW8|RF1_BORAP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|110890292|gb|ABH01460.1| peptide chain release factor 1 [Borrelia afzelii PKo] Length = 357 Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 126/342 (36%), Positives = 197/342 (57%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72 ++A R+ + K +D +L +N + +++E +L+ + + I +++ DN + Sbjct: 6 LNSATSRIKSIEEKLQDINLIKNQKKYSKIIKEYTYLEKINTKKIEYENILNQINDNKTI 65 Query: 73 LELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LE +++ ++++ +L + K + L E DS + +E+ AG GG E+ Sbjct: 66 LEKEEQQEMKELIKQELIDLDKKKENLEHEIKILLLPQDENDSKNIIIEIRAGTGGEEAA 125 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +AN L MY +++EK+K+KTE + ++ E G K IKG + + LK E GVHR+ Sbjct: 126 LFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +SN R TS +++ V P ++++ I+E D RID YR+SGAGGQHVNTTDSAVR Sbjct: 186 RIPITESNGRLQTSAATVAVLPNIEETEID-INEKDLRIDVYRSSGAGGQHVNTTDSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VVQCQ ERSQHKNK QA +LRA+LYE E K++E + K ++G G Sbjct: 245 ITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSNNRKQQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P + D R NI + + G+LD + Sbjct: 303 SERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDQLLDPL 343 >gi|216264821|ref|ZP_03436813.1| peptide chain release factor 2 [Borrelia burgdorferi 156a] gi|226320754|ref|ZP_03796310.1| peptide chain release factor 2 [Borrelia burgdorferi 29805] gi|215981294|gb|EEC22101.1| peptide chain release factor 2 [Borrelia burgdorferi 156a] gi|226233809|gb|EEH32534.1| peptide chain release factor 2 [Borrelia burgdorferi 29805] Length = 269 Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 138/267 (51%), Positives = 186/267 (69%), Gaps = 1/267 (0%) Query: 88 TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 ++ + + S E D+N+A+L +H+GAGGTE+ DW ML RMY+R+AE+ Sbjct: 1 MEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGGTEACDWVAMLYRMYSRYAER 60 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 +K+KTE +++ + E GIKS T+ IKG AYG LK E G+HRL+RISP+D+ +RHTSF+ Sbjct: 61 KKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRISPFDAAKKRHTSFA 119 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 S++V PV+DD IEI I D RIDTYRASGAGGQHVN T SAVRITHI TG+V Q Q +R Sbjct: 120 SVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITHIETGIVTQSQSDR 179 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQHKNK A +L+++LYE K +E + +K EI WG QIRSYV QPY +VKD R Sbjct: 180 SQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGNQIRSYVFQPYNLVKDHR 239 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354 T E ++ + V+DG++D+F++ L K Sbjct: 240 TKFENSNTTSVMDGNIDNFIEEYLKWK 266 >gi|162447071|ref|YP_001620203.1| peptide chain release factor RF-1 [Acholeplasma laidlawii PG-8A] gi|226739094|sp|A9NEP7|RF1_ACHLI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|161985178|gb|ABX80827.1| peptide chain release factor RF-1 [Acholeplasma laidlawii PG-8A] Length = 354 Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 109/347 (31%), Positives = 172/347 (49%), Gaps = 14/347 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + + L K +V E LM+E + L++A+ ++ Sbjct: 1 MFERLEVMRKTYYALQEKLASG--ISDVKEITKLMKELKSLEDAVVAYEKYLSLKEQLKD 58 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 L EL E + S+L+ + ++ ++E + L D + +E+ AGG Sbjct: 59 LEELLELETESSVLEMAKAEEKSLESDIENLEESLRILLLPKDPDDDKNVIIEIKGAAGG 118 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E +A L +MY+++AE +K + G G +I G NA+ +LK E GV Sbjct: 119 DEGNIFAGDLFKMYSKYAESMGWKVTLVNTTPGSSGGFAGIEFIISGENAFSYLKHESGV 178 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS + + P + IE ++ D R DTY +SGAGGQ VNTT Sbjct: 179 HRVQRVPETESQGRIHTSTAVVLALP-EQEDIEYDVKWEDIRFDTYNSSGAGGQSVNTTY 237 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIPT VVV Q+ERSQH NK +A+ +L ++Y+ Q++ E GES K IG Sbjct: 238 SAVRLTHIPTNVVVTSQEERSQHANKDRAYKLLVTRIYDKIQQEQLE--KEGESRKALIG 295 Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G + IR+Y P V D R + +++G +D ++ + Sbjct: 296 RGNRSEKIRTYNY-PQNRVTDHRIGLTINRLDAIMEGRIDLIIEPLI 341 >gi|293977757|ref|YP_003543187.1| bacterial peptide chain release factor 1 [Candidatus Sulcia muelleri DMIN] gi|292667688|gb|ADE35323.1| bacterial peptide chain release factor 1 (bRF-1) [Candidatus Sulcia muelleri DMIN] Length = 352 Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 108/340 (31%), Positives = 179/340 (52%), Gaps = 8/340 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R L+ P + + + L +E + + I++ +++ + L Sbjct: 11 IEVLKKRFYELSFLIIKPEIIHDNKKYVKLSKEYKIIYKIINYYNSYKEKKKYLKEIESL 70 Query: 76 ALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 D +L+ ++ +LE K+ E LL ++N+ +E+ AG GG E+ + Sbjct: 71 IKLSSDKELLEFAIFEKKKNLLELEFLIKKIEYLLKKNNNTNNVLMELRAGTGGDEACIF 130 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 + RMYT + ++ +K E L + G G K + I+G N YG LK E GVHR+ R+ Sbjct: 131 VENIFRMYTMYFKELCWKYEILNMQQGTIKGYKEIIIEIQGKNVYGTLKFESGVHRVQRV 190 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +S R HTS ++ + P D + I I SD + +T+RASGAGGQHVN T+SA+R+T Sbjct: 191 PSTESQGRLHTSAITVAILPEEDYNNNINIVLSDLKRETFRASGAGGQHVNKTESAIRLT 250 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ-- 311 HIPTG++ +CQ+ERSQHKN +A +LRA++Y+ EL+ + E + + K+ I G + Sbjct: 251 HIPTGIIAECQEERSQHKNYEKAMKVLRARIYQSELKIKNE--KLSKERKSLISTGDRSA 308 Query: 312 -IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P V D R N ++G +++ + A Sbjct: 309 KIRTYNY-PQGRVTDHRINKSIYYLDKFMNGKINEMITAL 347 >gi|224534432|ref|ZP_03675010.1| peptide chain release factor 1 [Borrelia spielmanii A14S] gi|224514534|gb|EEF84850.1| peptide chain release factor 1 [Borrelia spielmanii A14S] Length = 357 Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 125/342 (36%), Positives = 189/342 (55%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++A ++ + K +D +L +N + +++E HL+ + E + L + Sbjct: 6 LNSATSKIKSIEEKLQDINLIKNQKKYSKIIKEYTHLEKINTKKIEYEKILNQINDNKTI 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 +ED + + L + + E + E E DS + +E+ AG GG E+ Sbjct: 66 LEKEDQQEMKELIKQELIDLDKKKEEVEHEIKILLLPQDENDSKNIIIEIRAGTGGEEAA 125 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +AN L MY +++EK+K+KTE + ++ E G K IKG + + LK E GVHR+ Sbjct: 126 LFANNLYGMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +SN R TS +++ V P ++++ I+E D RID YR+SGAGGQHVNTTDSAVR Sbjct: 186 RIPITESNGRLQTSAATVAVLPNIEETEID-INEKDLRIDVYRSSGAGGQHVNTTDSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VVQCQ ERSQHKNK QA +LRA+LYE E K++E + K ++G G Sbjct: 245 ITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSNNRKQQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P + D R NI + + G+LD + Sbjct: 303 SERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDPLLDPL 343 >gi|94502363|ref|ZP_01308828.1| peptide chain release factor 1 [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|161833646|ref|YP_001597842.1| peptide chain release factor 1 [Candidatus Sulcia muelleri GWSS] gi|94451077|gb|EAT14037.1| peptide chain release factor 1 [Candidatus Sulcia muelleri str. Hc (Homalodisca coagulata)] gi|152206135|gb|ABS30445.1| peptide chain release factor 1 [Candidatus Sulcia muelleri GWSS] Length = 355 Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 109/345 (31%), Positives = 183/345 (53%), Gaps = 8/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R L+ P + + + L +E + + I++ +++ + L Sbjct: 11 IEVLKKRFYELSFLIIKPEIIHDNKKYVKLSKEYKIIYKIINYYNSYKEKKKYLKEIESL 70 Query: 76 ALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 + D +L+ ++ +LE K+ E LL ++N+ +E+ AG GG E+ + Sbjct: 71 IKLDSDKELLEFAIFEKKKNLLELEFLIKKIEYLLKKNNNTNNVLMELRAGTGGDEACIF 130 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 + RMYT + ++ +K E L + G G K + I+G N YG LK E GVHR+ R+ Sbjct: 131 VENIFRMYTMYFKELCWKYEILNMQQGTIKGYKEIIIEIQGKNVYGTLKFESGVHRVQRV 190 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +S R HTS ++ + P D + I I SD + +T+RASGAGGQHVN T+SA+R+T Sbjct: 191 PSTESQGRLHTSAITVAILPEEDYNNNINIVLSDLKRETFRASGAGGQHVNKTESAIRLT 250 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ-- 311 HIPTG++ +CQ+ERSQHKN +A +LRA++Y+ EL+ + E + + K+ I G + Sbjct: 251 HIPTGIIAECQEERSQHKNYEKAMKVLRARIYQSELKIKNE--KLSKERKSLISTGDRSA 308 Query: 312 -IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N ++G +++ + A ++K Sbjct: 309 KIRTYNY-PQGRVTDHRINKSIYYLDKFMNGKINEMITALKILEK 352 >gi|224532320|ref|ZP_03672952.1| peptide chain release factor 2 [Borrelia valaisiana VS116] gi|224511785|gb|EEF82191.1| peptide chain release factor 2 [Borrelia valaisiana VS116] Length = 269 Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 136/267 (50%), Positives = 184/267 (68%), Gaps = 1/267 (0%) Query: 88 TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 ++ + + S E D+N A+L +H+GAGGTE+ DW ML RMY+R+ E+ Sbjct: 1 MEIEFNILEKQYKDLLTISYFKEELDANGAFLTIHSGAGGTEACDWVAMLYRMYSRYVER 60 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 +K+KTE +++ + E GIKS T+ IKG AYG LK E G+HRL+RISP+D+ +RHTSF+ Sbjct: 61 KKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRISPFDAAKKRHTSFA 119 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 S++V PV+D+ IEI I D RIDTYRASGAGGQHVN T SAVRITHI TG+V Q Q +R Sbjct: 120 SVFVDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITHIETGIVTQSQSDR 179 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQHKNK A +L+++LYE K +E + +K EI WG QIRSYV QPY +VKD R Sbjct: 180 SQHKNKEMAMKVLKSRLYEYYKNKEDEKNKSKQDTKKEISWGNQIRSYVFQPYNLVKDHR 239 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354 T E ++ + V+DG++D+F++ L K Sbjct: 240 TKFENSNTTSVMDGNIDNFIEEYLKWK 266 >gi|145596156|ref|YP_001160453.1| peptide chain release factor 1 [Salinispora tropica CNB-440] gi|145305493|gb|ABP56075.1| bacterial peptide chain release factor 1 (bRF-1) [Salinispora tropica CNB-440] Length = 362 Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 105/336 (31%), Positives = 163/336 (48%), Gaps = 12/336 (3%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + + L + DP + + A+ + R L E+ D ELA E Sbjct: 9 LLDEYAELENRLADPAIHADQNTARRVGRRYAELVPLHKAATELTQARADLAAAKELAAE 68 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 + + E E + + D+ D +E+ AG GG ES +A LL Sbjct: 69 DPAFAAEAEAIAATLPALEECLAELL--IPRDPHDAKDVIVEIKAGEGGEESALFAGDLL 126 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVHRLV 191 RMYTR+AE+ + E ++ D + G+K +L IK + LK E GVHR+ Sbjct: 127 RMYTRYAERCGWLVEVIDAQDSDLGGVKDVSLAIKSKGVPEGGNGVWSRLKWEGGVHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS + + + P + I++ I ++ RID +R+SG GGQ VNTTDSAVR Sbjct: 187 RVPVTESQGRIHTSAAGVLMLP-EAEEIDVTIDPNELRIDVFRSSGPGGQSVNTTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGR 310 ITH+PTG+VV CQ E+SQ +N+ QA +LRA+L + ++ + A+ ++ + Sbjct: 246 ITHLPTGIVVSCQNEKSQLQNREQAMRILRARLLAVAQEQADAAASDARKAQVRTVDRSE 305 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 +IR+Y P + D R + L G+LD Sbjct: 306 RIRTYNF-PQNRITDHRIGYTAYNLDLALAGELDGV 340 >gi|38233635|ref|NP_939402.1| peptide chain release factor 1 [Corynebacterium diphtheriae NCTC 13129] gi|81564890|sp|Q6NHU0|RF1_CORDI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|38199895|emb|CAE49561.1| peptide chain release factor 1 (RF-1) [Corynebacterium diphtheriae] Length = 356 Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 117/346 (33%), Positives = 175/346 (50%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ V + + DP + + L + L I+ ++ D+ E+ Sbjct: 7 VDDIVSEYQGIEAQMSDPETMGDQTLFRKLSKRYSELQPIINVNNKLVQARDDHEAAEEM 66 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A E+ + + E E D +D +EV AGAGG E+ +A Sbjct: 67 AYEDKEFAAEAERLAEEIVSLEEQLADLL--APRDPHDGDDIVMEVKAGAGGEEAALFAG 124 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190 L+RMY R+AEK F E L + + + G+K TL I+ A+ K E GVHR+ Sbjct: 125 ELVRMYQRYAEKHGFTVEVLGLSESDLGGVKDMTLSIRSKTPSRDGAWSVFKFEGGVHRV 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R TS + + VYP D+ E+EI + D R+D YR+SG GGQ VNTTDSAV Sbjct: 185 QRVPVTESQGRIQTSAAGVLVYPEPDEVAEVEIDDKDLRVDVYRSSGKGGQGVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG+VV CQ+ERSQ +NKA+A +L A+L + ++ E A G +++ + Sbjct: 245 RITHLPTGLVVTCQKERSQIQNKARAMQVLAARLQAMAEEQAEAEAAEGRAAQIRTMDRS 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + + VL+GDLDD A A ++ Sbjct: 305 ERIRTYNW-PENRISDHRIGYKANNLDSVLNGDLDDLFSALQAAER 349 >gi|118475342|ref|YP_892837.1| peptide chain release factor 1 [Campylobacter fetus subsp. fetus 82-40] gi|166223541|sp|A0RRK4|RF1_CAMFF RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|118414568|gb|ABK82988.1| peptide chain release factor 1 [Campylobacter fetus subsp. fetus 82-40] Length = 355 Score = 198 bits (504), Expect = 8e-49, Method: Composition-based stats. Identities = 108/341 (31%), Positives = 173/341 (50%), Gaps = 9/341 (2%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 + R + LN+ DP + ++ L +E+++L++ + L L + Sbjct: 10 IDRYNELNSILSDPEVINDISRMTKLSKEQRNLESIKDATQRYLSILNGIEENKTLLEDP 69 Query: 80 DDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 + + ++ L+ E + L D + +LE+ AG GG E+ + L Sbjct: 70 ELGELAKDELKALETELPKLEEEIKLLLLPKDPNDEKNIFLELRAGTGGDEAALFVGDLA 129 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 Y R+ E+R +K E + +G G K LLIKG AY LK E G HR+ R+ +S Sbjct: 130 TAYIRYTEERGYKYEIVSSSEGSAGGYKELILLIKGEGAYSRLKYEGGTHRVQRVPETES 189 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R HTS ++ + P V+DS I+ +D +ID R+SG GGQ VNTTDSAVR+THIPTG Sbjct: 190 QGRVHTSAITVAIMPEVEDSEID-INPNDLKIDVMRSSGHGGQSVNTTDSAVRVTHIPTG 248 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSY 315 +VV Q +SQHKNK A +L+A+LY+++ ++R E + K ++G G +IR+Y Sbjct: 249 LVVVNQDGKSQHKNKDAAIKVLKARLYDMQERERRE--KESKERKDQVGTGDRSGRIRTY 306 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 P + D R N+ ++ G D+ + +A + Sbjct: 307 NY-PQNRISDHRINLTLYRLDAIMAAGLFDEIIDPLIAHYQ 346 >gi|53711665|ref|YP_097657.1| peptide chain release factor RF-2 [Bacteroides fragilis YCH46] gi|60679910|ref|YP_210054.1| putative peptide chain release factor [Bacteroides fragilis NCTC 9343] gi|253564278|ref|ZP_04841735.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|265765049|ref|ZP_06093324.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|52214530|dbj|BAD47123.1| peptide chain release factor RF-2 [Bacteroides fragilis YCH46] gi|60491344|emb|CAH06092.1| putative peptide chain release factor [Bacteroides fragilis NCTC 9343] gi|251948054|gb|EES88336.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|263254433|gb|EEZ25867.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|301161435|emb|CBW20975.1| putative peptide chain release factor [Bacteroides fragilis 638R] Length = 319 Score = 198 bits (504), Expect = 8e-49, Method: Composition-based stats. Identities = 123/315 (39%), Positives = 187/315 (59%), Gaps = 11/315 (3%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ + L I +++ + + + D+ QE + + VE + + Sbjct: 1 MKLVKGLQKWIEGYNDVKTLTDELELAFDFYK--DELVTEQEVDEAYAKALEHVENLELQ 58 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++L EAD L++++GAGGTESQDWA+ML+RMY R+AE +K + +G+EAGI Sbjct: 59 NMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYLRYAETNGYKATMANLQEGDEAGI 118 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ T+ I+G AYG+LKGE GVHRLVR+SPY++ +R TSF+S++V P+VDDSIE+ I Sbjct: 119 KTCTIQIEGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNILP 178 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAW 277 + DT+R+ GAGGQ+VN +S VR+ + ++++ + R Q KN+ A Sbjct: 179 ACISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNRENAM 238 Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 LR+ LY+ ELQ R E+ K +I WG QIRSYV + VKD RTN + + + Sbjct: 239 RQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNG 297 Query: 338 VLDGDLDDFMKATLA 352 V+DG ++ F+KA L Sbjct: 298 VMDGKIEGFIKAYLM 312 >gi|15892685|ref|NP_360399.1| peptide chain release factor 1 [Rickettsia conorii str. Malish 7] gi|20139335|sp|Q92HK9|RF1_RICCN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|15619858|gb|AAL03300.1| peptide chain release factor RF-1 [Rickettsia conorii str. Malish 7] Length = 355 Score = 198 bits (504), Expect = 8e-49, Method: Composition-based stats. Identities = 123/347 (35%), Positives = 184/347 (53%), Gaps = 16/347 (4%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + + + L K + + E +E L++ ++ IKE + Sbjct: 6 NLAKILDKYENLGNKLSS-GIMGD--EFVKASKEYAELEDVVAKIKEYNKAKSELEEANN 62 Query: 75 LALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LE + E ++ + L +ADS A +EV AG+GG E Sbjct: 63 FKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGGEE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A +L MY R+AE + + E L I D G K A+ IKG + + LK E GVHR Sbjct: 123 AALFAAVLFNMYQRYAELKGWHFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS +++ V P + ++I+I + D RIDTYRASGAGGQHVNTTDSA Sbjct: 183 VQRVPETESQGRIHTSAATVAVLP-EAEEVDIKIEDKDLRIDTYRASGAGGQHVNTTDSA 241 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG+ V Q E+SQHKNKA+A +LRA++YE E + ++ +S + ++G G Sbjct: 242 VRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERR--KKEQERADSRRGQVGSG 299 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352 +IR+Y P V D R N+ +V+ +G LD+F++A +A Sbjct: 300 DRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345 >gi|297622890|ref|YP_003704324.1| peptide chain release factor 1 [Truepera radiovictrix DSM 17093] gi|297164070|gb|ADI13781.1| peptide chain release factor 1 [Truepera radiovictrix DSM 17093] Length = 373 Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats. Identities = 105/347 (30%), Positives = 165/347 (47%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +N + L DP L + + M L + +E +D + E Sbjct: 5 LENLRREFDELEASLGDPELIADQARYREAMGRYSELQTIVRTYREYKDLVDGLQNAREA 64 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E +++ + L D + +E+ A AGG E+ +A Sbjct: 65 LADPELAEMAREEIAALEPQLEALERRLERLLLPKDPFDDKNVIVEIRAAAGGDEASLFA 124 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 + MY R+AE + FKTE L+ H G + I G AY K E GVHR+ R+ Sbjct: 125 AEVFEMYRRYAEAQGFKTEVLDSHPSSVGGFSKVSFEILGRGAYSKFKFESGVHRVQRVP 184 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P + +++++S +D R+D +R+SG GGQ VNTTDSAVRIT+ Sbjct: 185 ATETQGRIHTSTVTVAVLP-EAEDVDVQLSPADYRVDVFRSSGPGGQSVNTTDSAVRITY 243 Query: 255 IP---TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 P +VV CQ +SQ KNK +A +LRA+L E E ++ A +IG G + Sbjct: 244 KPGTSDEIVVTCQDGKSQIKNKEKALAVLRARLLERERERAAAEAREARL--VQIGSGER 301 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P + D R + SDVL G LD+ +A + ++ Sbjct: 302 SEKIRTYNF-PQSRITDHRIGYTTHNLSDVLLGKLDELTEALSSAEQ 347 >gi|217077770|ref|YP_002335488.1| peptide chain release factor 1 [Thermosipho africanus TCF52B] gi|217037625|gb|ACJ76147.1| peptide chain release factor 1 [Thermosipho africanus TCF52B] Length = 358 Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats. Identities = 124/336 (36%), Positives = 178/336 (52%), Gaps = 14/336 (4%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 + L L K + + + + KE + + L EE Sbjct: 15 KKLLKSLEEKLSSQLT---PDQIRTYSEKYSKMKEIFQLAKEYLEIEDEIE----LWKEE 67 Query: 80 DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139 E ++ + ++ L E + +LE+ AG GG E+ +A LLR Sbjct: 68 MPEGFEHEVEKLQKKQEDIMQDLISLVLPESEYSGKNVFLEIRAGTGGEEAALFAADLLR 127 Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY R+ EK+ FK E ++ + + G K + IKG N LK E GVHR+ R+ +S Sbjct: 128 MYLRYVEKKNFKAEIVDENKTDLGGYKEVVIKIKGKNVGNLLKYESGVHRVQRVPTTESG 187 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS +++ V P ++EIEI+ SD RIDTYRASGAGGQ+VN T+SAVRITHIPTG+ Sbjct: 188 GRIHTSTATVAVLP-EVSNVEIEINPSDIRIDTYRASGAGGQYVNKTESAVRITHIPTGI 246 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYV 316 VV CQ ERSQ +NK QA N+LRA+L++L+L+ E+ I + K++IG G + IR+Y Sbjct: 247 VVTCQSERSQLQNKEQAMNILRARLFKLKLE--EQERKISSNRKSQIGTGERSEKIRTYN 304 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 P V D R N + VLDG+LD+F+ + Sbjct: 305 F-PQNRVTDHRINYTSYNLQAVLDGELDEFITRLMR 339 >gi|269128128|ref|YP_003301498.1| peptide chain release factor 1 [Thermomonospora curvata DSM 43183] gi|268313086|gb|ACY99460.1| peptide chain release factor 1 [Thermomonospora curvata DSM 43183] Length = 361 Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats. Identities = 114/350 (32%), Positives = 172/350 (49%), Gaps = 13/350 (3%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 + D + + + K DP + + A+ L + L + ++++ D Sbjct: 1 MNLDELIGEYTEIEGKLADPAVHADQNAARRLGKRYAQLRPIVETARQLRSVEGDLEAAR 60 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 ELA E+ + + + + + + D D LE+ AG GG ES + Sbjct: 61 ELAAEDGAFAAEAAELEKRRTELE--QKLRKLLIPRDPNDDKDVILEIKAGEGGEESALF 118 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN--------AYGWLKGEQ 185 A LLRMY R+AE+ +KTE L + G K T+ +K A+ LK E Sbjct: 119 AGDLLRMYLRYAERIGWKTEILSSQPSDLGGYKDVTVAVKARPGPDGEPIGAWSHLKFEG 178 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ +S R HTS + V P + I+++I +D RID YR+SG GGQ VNT Sbjct: 179 GVHRVQRVPVTESQGRIHTSAVGVLVTP-EAEEIDVQIDPNDLRIDVYRSSGPGGQSVNT 237 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITH+PTGVVV CQ E+SQ +NK QA +LR++L L Q+ E A S+ Sbjct: 238 TDSAVRITHLPTGVVVSCQNEKSQLQNKEQAMRILRSRLLALAQQEAEAAAAAERRSQVR 297 Query: 306 -IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + ++R+Y P + D R + + VLDGDL + ++ + Sbjct: 298 TVDRSERVRTYNF-PENRISDHRVGYKAYNLDQVLDGDLHNVIQTLVEAD 346 >gi|225548553|ref|ZP_03769601.1| peptide chain release factor 1 [Borrelia burgdorferi 94a] gi|225370816|gb|EEH00251.1| peptide chain release factor 1 [Borrelia burgdorferi 94a] Length = 357 Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats. Identities = 123/347 (35%), Positives = 190/347 (54%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++A ++ + K +D +L ++ + +++E L+ + E + L + Sbjct: 6 LNSATSKIKLIEEKLQDINLIKDQKKYSKIIKEYTCLEKINTKKIEYEKILSQINDTKTI 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 +ED + + L + + E + L E DS + +E+ AG GG E+ Sbjct: 66 LEKEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGTGGEEAA 125 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +AN L MY +++EK+K+KTE + ++ E G K IKG + + LK E GVHR+ Sbjct: 126 LFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +SN R TS +++ V P ++++ I+E D RID YR+SGAGGQHVNTTDSAVR Sbjct: 186 RIPITESNGRLQTSAATVAVLPNIEETEID-INEKDLRIDVYRSSGAGGQHVNTTDSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VVQCQ ERSQHKNK QA +LRA+LYE E K++E + K ++G G Sbjct: 245 ITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R NI + + G+LD + + + Sbjct: 303 SERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDPLLDPLMIALQ 348 >gi|154490399|ref|ZP_02030660.1| hypothetical protein PARMER_00632 [Parabacteroides merdae ATCC 43184] gi|154089010|gb|EDN88054.1| hypothetical protein PARMER_00632 [Parabacteroides merdae ATCC 43184] Length = 322 Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats. Identities = 130/315 (41%), Positives = 190/315 (60%), Gaps = 11/315 (3%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M++ + L I E+ + + + + +E + VE +F Sbjct: 1 MKKVKELKKWIELYNEVHAAAEELQLAYDYVK--EGIVSEEEVDEAYGNAIQLVESLEFR 58 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++L EAD L++++GAGGTESQDWA+MLLRMYTRWAE +K +G+EAGI Sbjct: 59 NMLRQEADQMSCVLKINSGAGGTESQDWASMLLRMYTRWAEANGYKISVANYQEGDEAGI 118 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ATL I+G AYG+LKGE GVHRLVR+SPY++ +R TSF+S++V P+VDD+IE++I + Sbjct: 119 KTATLNIEGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVKIDQ 178 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAW 277 + DT+R+ GAGGQ+VN +S VR+ + ++++ + R Q KN+ A Sbjct: 179 AAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAM 238 Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 LR+ LY+ ELQ R E E+ K +I WG QIRSYV + VKD RTN + + + Sbjct: 239 RQLRSILYDKELQHRMEEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNG 297 Query: 338 VLDGDLDDFMKATLA 352 V+DG +DDF+KA L Sbjct: 298 VMDGKIDDFIKAYLM 312 >gi|296116158|ref|ZP_06834776.1| peptide chain release factor 1 [Gluconacetobacter hansenii ATCC 23769] gi|295977264|gb|EFG84024.1| peptide chain release factor 1 [Gluconacetobacter hansenii ATCC 23769] Length = 353 Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats. Identities = 110/348 (31%), Positives = 172/348 (49%), Gaps = 13/348 (3%) Query: 14 FD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 FD D V R L + + RE LD ++ + ++ Sbjct: 4 FDERLDRIVARGEELQALLAEG---LSGAAFSQASREFAELDPIVAKVNALRATEQAVQD 60 Query: 72 LLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L + + + + L+R + L EAD A LE+ AGG E+ Sbjct: 61 TQALLDDPEMRGLAESELAELRRRIPELEHDIRIAMLPRDEADDRSAILEIRPAAGGDEA 120 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A + Y R+A++R ++ E LE + E G++ I G + LK E GVHR+ Sbjct: 121 ALFAGQMFGAYQRYADQRGWRFEILEYDESELGGLREGIASITGRGVFARLKYESGVHRV 180 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS ++ V P + +++EI+++D RID YRASGAGGQHVN T+SAV Sbjct: 181 QRVPATESQGRIHTSTVTVAVLP-EAEEVDVEINDNDLRIDVYRASGAGGQHVNKTESAV 239 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+P+G+VV Q+E+SQHKN+A+A +LRA+LY E + ++++G G Sbjct: 240 RITHMPSGIVVAMQEEKSQHKNRAKAMKILRARLY--ERNRAAAHETRAADRRSQVGTGD 297 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + V+ G+ D+F+ A ++ Sbjct: 298 RSERIRTYNF-PQGRVTDHRIGLTLYKIDKVMGGEFDEFVDALTQEEQ 344 >gi|300025029|ref|YP_003757640.1| peptide chain release factor 1 [Hyphomicrobium denitrificans ATCC 51888] gi|299526850|gb|ADJ25319.1| peptide chain release factor 1 [Hyphomicrobium denitrificans ATCC 51888] Length = 359 Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats. Identities = 110/326 (33%), Positives = 169/326 (51%), Gaps = 14/326 (4%) Query: 39 VIEAKMLMRERQHLDN---AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 + L +E L I +++ + D LL + D + L Sbjct: 29 QAQYVKLTKEFAELSPAAAQIEALRKAEAESADLEQLLRDPSADKDMADLAYAERAALAE 88 Query: 96 KLEVEYKQFESLLSGEA--DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 ++ +Q L + D A LEV AG GG E+ +A L RMY+R+A+ R +K E Sbjct: 89 RIGGLEQQLRIALLPKDAADEKSAILEVRAGTGGDEAALFAADLFRMYSRYADLRGWKVE 148 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 + + + G K I G + LK E GVHR+ R+ +++ R HTS +++ V P Sbjct: 149 VISASENDLGGYKEIVASITGEGVFARLKFESGVHRVQRVPATEASGRIHTSAATVAVLP 208 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 + +EI+I D RIDT RA GAGGQHVN T+SAVRITH+PTG+VV E+SQH+N+ Sbjct: 209 -EAEDVEIDIKPDDIRIDTMRAGGAGGQHVNKTESAVRITHLPTGIVV-VSAEKSQHQNR 266 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRTNI 330 A N+L+A++YELE +K ++ K+++G G +IR+Y P V D R N+ Sbjct: 267 RLAMNVLKARVYELEREK--AATERSDARKSQVGSGDRSQRIRTYNF-PQGRVTDHRINL 323 Query: 331 EKTSPSDVLDGD-LDDFMKATLAIKK 355 + +V+ G+ LD + A + + Sbjct: 324 TLYNLDEVMVGNGLDALVDALITDHQ 349 >gi|254778803|ref|YP_003056908.1| peptide chain release factor 1 [Helicobacter pylori B38] gi|254000714|emb|CAX28630.1| Peptide chain release factor 1 (RF-1) [Helicobacter pylori B38] Length = 352 Score = 198 bits (504), Expect = 9e-49, Method: Composition-based stats. Identities = 103/345 (29%), Positives = 176/345 (51%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R L + ++ + L +E+ ++ KE L D EL Sbjct: 8 LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLEDIKENKEL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ + +E L+ K ++E + + D + YLE+ AG GG E+ + Sbjct: 68 LEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L + Y R+A+ +K+K E + + G K LIKG Y K E G HR+ R+ Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRFKFEAGTHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PT + V Q E+SQHKNK +A +L+ +LYE ++++++ + K ++G G + Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKVRLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + + R N+ S +++ G+LD+ + +A + Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348 >gi|218259544|ref|ZP_03475251.1| hypothetical protein PRABACTJOHN_00909 [Parabacteroides johnsonii DSM 18315] gi|218225027|gb|EEC97677.1| hypothetical protein PRABACTJOHN_00909 [Parabacteroides johnsonii DSM 18315] Length = 322 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 130/315 (41%), Positives = 190/315 (60%), Gaps = 11/315 (3%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M++ + L I E+ + + + + +E + VE +F Sbjct: 1 MKKVKELKKWIELYNEVHAAAEELQLAYDYVK--EGIVSEEEVDEAYGNAIQLVESLEFR 58 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++L EAD L++++GAGGTESQDWA+MLLRMYTRWAE +K +G+EAGI Sbjct: 59 NMLRQEADQMSCVLKINSGAGGTESQDWASMLLRMYTRWAEANGYKISVANYQEGDEAGI 118 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ATL I+G AYG+LKGE GVHRLVR+SPY++ +R TSF+S++V P+VDD+IE++I + Sbjct: 119 KTATLNIEGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVKIDQ 178 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAW 277 + DT+R+ GAGGQ+VN +S VR+ + ++++ + R Q KN+ A Sbjct: 179 AAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAM 238 Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 LR+ LY+ ELQ R E E+ K +I WG QIRSYV + VKD RTN + + + Sbjct: 239 RQLRSILYDKELQHRMEEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNG 297 Query: 338 VLDGDLDDFMKATLA 352 V+DG +DDF+KA L Sbjct: 298 VMDGKIDDFIKAYLM 312 >gi|15639045|ref|NP_218491.1| peptide chain release factor 1 [Treponema pallidum subsp. pallidum str. Nichols] gi|6093956|sp|O83090|RF1_TREPA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|3322309|gb|AAC65047.1| peptide chain release factor 1 (prfA) [Treponema pallidum subsp. pallidum str. Nichols] Length = 351 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 106/342 (30%), Positives = 169/342 (49%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L + E+P L+ + + MR+ +L + L Sbjct: 5 LEELRAQWRKLQQEVENPSLFSSTQSYRERMRDHAYLSRLMEEYDRYLLTEKQLEDAHVL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQF----ESLLSGEADSNDAYLEVHAGAGGTESQ 131 +E D ++ ++ + Q + + +E+ G GG E+ Sbjct: 65 IQDESDADFKDVIRQEIRTLEAALHTSQKRLKTLLIPPDSLQEKNIIMEIRGGTGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMYT +AE ++++ E L + + E G K T I G + YG L+ E GVHR+ Sbjct: 125 LFAADLFRMYTHYAESKQWRYEVLAVSETELGGFKEITFSISGRDVYGSLRYESGVHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +++ R HTS ++ V P ++++ I D R+D RASG GGQ VNTTDSAVR Sbjct: 185 RVPSTEASGRIHTSAVTVAVLPEMEETEVD-IRAEDVRVDVMRASGPGGQCVNTTDSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +TH+PTG+VV CQ E+SQ KNKA+A +LR+++Y+LE KR+ K+++G G Sbjct: 244 LTHLPTGIVVVCQDEKSQIKNKAKAMRVLRSRVYDLEESKRQ--VARARERKSQVGSGDR 301 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R + V+ G LDD ++ Sbjct: 302 SERIRTYNF-PQNRVTDHRVRVTLYKLDAVMQGALDDIIEPL 342 >gi|298711208|emb|CBJ32429.1| peptide chain release factor 1 [Ectocarpus siliculosus] Length = 448 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 93/352 (26%), Positives = 164/352 (46%), Gaps = 17/352 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L + DP + N + +ER ++ ++ E D E+ Sbjct: 80 LSGIDRTFNELTERLGDPDVLANPKLIMEVSQERASVEEIVNCYAEYTKAAEDLEGAKEM 139 Query: 76 A--------LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 E +E D + ++ + L + D + LE+ AG GG Sbjct: 140 FTESSGAGGDAEMKEMAREEIRDLEEVMEALETKMKLLLLPTDPNDDRNVMLEIRAGTGG 199 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ WA LL +Y ++A ++ + + +E E G ++ + G Y LK E GV Sbjct: 200 DEAALWAAELLGVYKKYALEQGWSLKVIESAMVEAGGFRTVIAEVNGDKVYSKLKYEAGV 259 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS +++ + P D + + I D I T R+ G+GGQ+VN + Sbjct: 260 HRVQRVPATETQGRVHTSTATVAIMP-EVDEVAVNIRPEDIEIKTARSGGSGGQNVNKVE 318 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAV + H PTG+ + C QERSQ KN+ A +LR+++Y++EL+K++ + K ++G Sbjct: 319 SAVDLFHKPTGIRIFCTQERSQLKNREVAMKLLRSRVYDIELEKQQAE--TSGNRKAQVG 376 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIKK 355 G +IR+Y + D R + ++ L G LDD + A + + + Sbjct: 377 SGSRSEKIRTYNWKD-SRCSDHRIG-KNFPLNNFLSGSGLDDMIGACILLDQ 426 >gi|312148979|gb|ADQ29050.1| peptide chain release factor 1 [Borrelia burgdorferi N40] Length = 357 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 121/347 (34%), Positives = 190/347 (54%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ ++ + K +D +L ++ + +++E +L+ + E + L + Sbjct: 6 LNSTTSKIKLIEEKLQDINLIKDQKKYSKIIKEYTYLEKINTKKIEYEKILSQINDTKTI 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 +ED + + L + + E + L E DS + +E+ AG GG E+ Sbjct: 66 LEKEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGTGGEEAA 125 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +AN L MY +++EK+K+KTE + ++ E G K IKG + + LK E GVHR+ Sbjct: 126 LFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +SN R TS +++ V P ++++ I+E D RID YR+SGAGGQHVNTTDSAVR Sbjct: 186 RIPITESNGRLQTSAATVAVLPNIEETEID-INEKDLRIDVYRSSGAGGQHVNTTDSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VVQCQ ERSQ+KNK QA +LRA+LYE E K++E + K ++G G Sbjct: 245 ITHLPTGIVVQCQNERSQYKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R NI + + G+LD + + + Sbjct: 303 SERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDPLLDPLMIALQ 348 >gi|159039554|ref|YP_001538807.1| peptide chain release factor 1 [Salinispora arenicola CNS-205] gi|157918389|gb|ABV99816.1| peptide chain release factor 1 [Salinispora arenicola CNS-205] Length = 362 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 104/339 (30%), Positives = 163/339 (48%), Gaps = 12/339 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L + DP + + A+ + R L E++ D EL Sbjct: 6 LAALLDEYADLEKRLADPAIHADQNMARRVGRRYAELVPLHKAASELEQARADLAAAKEL 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A E+ E E + + D+ D +E+ AG GG ES +A Sbjct: 66 AAEDPAFVGEAEAMAAALPALEEGLAELL--IPRDPHDAKDVIVEIKAGEGGEESALFAG 123 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVH 188 LLRMYTR+AE+ + E ++ D + G+K +L IK + LK E GVH Sbjct: 124 DLLRMYTRYAERCGWLVEVIDAQDSDLGGVKDVSLAIKSKGVPEGGNGVWSRLKWEGGVH 183 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS + + + P + +++ I ++ RID +R+SG GGQ VNTTDS Sbjct: 184 RVQRVPVTESQGRIHTSAAGVLMLP-EAEEVDVTIDPNELRIDVFRSSGPGGQSVNTTDS 242 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307 AVRITH+PTG+VV CQ E+SQ +N+ QA +LRA+L + ++ + A+ ++ + Sbjct: 243 AVRITHLPTGIVVSCQNEKSQLQNREQALRILRARLLAVAQEQADAAASDARKAQVRTVD 302 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 +IR+Y P + D R + L G+LD Sbjct: 303 RSERIRTYNF-PQNRITDHRIGYTAYNLDLALAGELDGV 340 >gi|261886265|ref|ZP_06010304.1| peptide chain release factor 1 [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 355 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 105/341 (30%), Positives = 172/341 (50%), Gaps = 9/341 (2%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 + R + LN+ DP + ++ L +E+++L++ + L L + Sbjct: 10 IDRYNELNSILSDPEVINDISRMTKLSKEQRNLESIKDATQRYLSILNGIEENKTLLEDP 69 Query: 80 DDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 + + ++ L+ E + L D + +LE+ AG GG E+ + L Sbjct: 70 ELGELAKDELKALETELPKLEEEIKLLLLPKDPNDEKNIFLELRAGTGGDEAALFVGDLA 129 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 Y R+ E+R +K E + +G G K LLIKG AY LK E G HR+ R+ +S Sbjct: 130 TAYIRYTEERGYKYEIVSSSEGSAGGYKELILLIKGEGAYSRLKYEGGTHRVQRVPETES 189 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R HTS ++ + P V+DS I+ +D +ID R+SG GGQ VNT+ S+VR+THIPTG Sbjct: 190 QGRVHTSAITVAIMPEVEDSEID-INPNDLKIDVMRSSGHGGQSVNTSVSSVRVTHIPTG 248 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSY 315 +VV Q +SQHKNK A +L+A+LY+++ ++R E + K ++G G +IR+Y Sbjct: 249 LVVVNQDGKSQHKNKDAAIKVLKARLYDMQERERRE--KESKERKDQVGTGDRSGRIRTY 306 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 P + D R N+ ++ G D+ + +A + Sbjct: 307 NY-PQNRISDHRINLTLYRLDAIMAAGLFDEIIDPLIAHYQ 346 >gi|308183875|ref|YP_003928008.1| peptide chain release factor 1 [Helicobacter pylori SJM180] gi|308059795|gb|ADO01691.1| peptide chain release factor 1 [Helicobacter pylori SJM180] Length = 352 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 104/345 (30%), Positives = 179/345 (51%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R L + + ++ + L +E+ ++ KE L D EL Sbjct: 8 LSSILKRYDELTALLSNAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLEDIKENKEL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ + +E L+ K ++E + + D + YLE+ AG GG E+ + Sbjct: 68 LEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L + Y R+A+ +K+K E + + G K LIKG Y LK E G HR+ R+ Sbjct: 128 GDLFKAYCRYADLKKWKVEVVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P D +E+ ++ SD +I+ +RA G GGQ VNTTDSAVRITH Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PT + V Q E+SQHKNK +A +L+A+LYE ++++++ + K ++G G + Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + + R N+ S +++ G+LD+ + +A + Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348 >gi|153809227|ref|ZP_01961895.1| hypothetical protein BACCAC_03538 [Bacteroides caccae ATCC 43185] gi|149128203|gb|EDM19423.1| hypothetical protein BACCAC_03538 [Bacteroides caccae ATCC 43185] Length = 319 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 124/315 (39%), Positives = 188/315 (59%), Gaps = 11/315 (3%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ + L IS E++ + + + ++ ++ + VE + + Sbjct: 1 MKLVKDLQKWISGYNEVKTLADELELAFDFYK--EELVTEEDVDAAYAKASEAVEALELK 58 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++L EAD D L++++GAGGTESQDWA+ML+RMY R+AE +K + +G+EAGI Sbjct: 59 NMLRDEADQMDCVLKINSGAGGTESQDWASMLMRMYLRYAETNGYKATIANLQEGDEAGI 118 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ T+ I+G AYG+LKGE GVHRLVR+SPY++ +R TSF+S++V P+VDDSIE+ I Sbjct: 119 KTCTINIEGDFAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNIET 178 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAW 277 + DT+R+ GAGGQ+VN +S VR+ + ++++ + R Q KN+ A Sbjct: 179 ARISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNRENAM 238 Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 LR+ LY+ ELQ R E+ K +I WG QIRSYV + VKD RTN + + + Sbjct: 239 RQLRSILYDKELQHRMAEQAKVEAGKMKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNG 297 Query: 338 VLDGDLDDFMKATLA 352 V+DG +D F+KA L Sbjct: 298 VMDGKIDGFIKAYLM 312 >gi|229586782|ref|YP_002845283.1| peptide chain release factor 1 [Rickettsia africae ESF-5] gi|259585242|sp|C3PNN0|RF1_RICAE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|228021832|gb|ACP53540.1| Peptide chain release factor RF-1 [Rickettsia africae ESF-5] Length = 355 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 123/347 (35%), Positives = 185/347 (53%), Gaps = 16/347 (4%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + + + L K + + E +E L++ ++ IKE + Sbjct: 6 NLAKILDKYENLGNKLSS-GIMGD--EFVKASKEYAELEDVVAKIKEYNKAKSELEEANN 62 Query: 75 LALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LE + E ++ + L +ADS A +EV AG+GG E Sbjct: 63 FKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGGEE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A +L MY R+AE + ++ E L I D G K A+ IKG + + LK E GVHR Sbjct: 123 AALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS +++ V P + ++I+I + D RIDTYRASGAGGQHVNTTDSA Sbjct: 183 VQRVPETESQGRIHTSAATVAVLP-EAEEVDIKIEDKDLRIDTYRASGAGGQHVNTTDSA 241 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG+ V Q E+SQHKNKA+A +LRA++YE E + ++ +S + ++G G Sbjct: 242 VRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERR--KKEQERADSRRGQVGSG 299 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352 +IR+Y P V D R N+ +V+ +G LD+F++A +A Sbjct: 300 NRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345 >gi|332886361|gb|EGK06605.1| peptide chain release factor 2 [Dysgonomonas mossii DSM 22836] Length = 318 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 128/315 (40%), Positives = 197/315 (62%), Gaps = 11/315 (3%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ + L I E++ + + + + + +E + + +E + + Sbjct: 1 MKIIRGLKGWIEGYNEVKASTDELQLAFDFQK--EGITTEEEVDEAYKNALSLIENLELK 58 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++L E D A L++++GAGGTE QDWA+ML RMY RW E +K+KT DG+EAGI Sbjct: 59 NMLRREEDKLGAVLKINSGAGGTEGQDWASMLFRMYQRWCEDKKYKTTITNWQDGDEAGI 118 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ATL ++G AYG+LK E GVHRLVR+SP+++ +R TSF+S++V P+VDD+I+I+I+ Sbjct: 119 KTATLQVEGEYAYGYLKSENGVHRLVRVSPFNAQGKRMTSFASVFVVPLVDDTIDIDINL 178 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAW 277 SD DT+R+SGAGGQ+VN ++ VR+ + +V++ + RSQ NK A Sbjct: 179 SDITWDTFRSSGAGGQNVNKVETGVRLHYKYKDPETGEEKEIVIENTESRSQFGNKDNAI 238 Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 +L+++LYELEL++R + E+ K +I WG QIRSYV + VKD RTN + ++ + Sbjct: 239 RLLKSQLYELELERRSREQSKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSNVNA 297 Query: 338 VLDGDLDDFMKATLA 352 V+DGDLDDF+K L Sbjct: 298 VMDGDLDDFIKEYLM 312 >gi|219123603|ref|XP_002182112.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217406713|gb|EEC46652.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 406 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 125/359 (34%), Positives = 182/359 (50%), Gaps = 12/359 (3%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ--NVIEAKMLMRERQ---HLDNAISFIKEI 62 L +++ L T+ P W N A ++ + L I +E Sbjct: 36 KNLASTTKLPALQSQIADLETEQSQPDFWDEANTSRAAIVNAQVSTATRLLTRIQAWQEW 95 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 L +L E+ +L E + R++ + + + E LLSG D A L + Sbjct: 96 HGDAQAALEILSQLASEERAMLLDEFRSAIARLREDSDRFELELLLSGPYDHAPARLLLT 155 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 AGAGGTE+ DW L RMY R E + GE G KS LL+ G NAYGWL+ Sbjct: 156 AGAGGTEANDWVGDLKRMYQRHCEAMGLSCVVQDEQAGEAVGYKSVELLVSGDNAYGWLQ 215 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI------SESDCRIDTYRAS 236 GE+G HR+VR+SP+++N++R T+F+ + V P + + + ES+ I T RA Sbjct: 216 GEKGAHRMVRLSPFNANNKRQTTFAGVDVAPDILNQDDDAYWNTIDVPESELEITTMRAG 275 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQ+VN +SAVRI H+P+G+ V+C QERSQ NK A L+A+L + ++R Sbjct: 276 GKGGQNVNKVNSAVRIKHLPSGLQVKCAQERSQSMNKNIALKRLKAQLLAIVQEQRVAEI 335 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354 E WG QIR+YV PY+MVKD RT E ++ +DGD L++ + + L K Sbjct: 336 KEIRGDMVEASWGAQIRNYVFHPYKMVKDQRTGWETSNVQAFMDGDLLEECIGSFLRHK 394 >gi|34580401|ref|ZP_00141881.1| peptide chain release factor RF-1 [Rickettsia sibirica 246] gi|28261786|gb|EAA25290.1| peptide chain release factor RF-1 [Rickettsia sibirica 246] Length = 355 Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats. Identities = 123/347 (35%), Positives = 185/347 (53%), Gaps = 16/347 (4%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + + + L K + + E +E L++ ++ IKE + Sbjct: 6 NLAKILDKYENLGNKLSS-GIMGD--EFVKASKEYAELEDVVAKIKEYNKAKSELEEANN 62 Query: 75 LALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LE + E ++ + L +ADS A +EV AG+GG E Sbjct: 63 FKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGGEE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A +L MY R+AE + ++ E L I D G K A+ IKG + + LK E GVHR Sbjct: 123 AALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS +++ V P + ++I+I + D RIDTYRASGAGGQHVNTTDSA Sbjct: 183 VQRVPETESQGRIHTSAATVAVLP-EAEEVDIKIEDKDLRIDTYRASGAGGQHVNTTDSA 241 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG+ V Q E+SQHKNKA+A +LRA++YE E + ++ +S + ++G G Sbjct: 242 VRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERR--KKEQERADSRRGQVGSG 299 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352 +IR+Y P V D R N+ +V+ +G LD+F++A +A Sbjct: 300 DRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345 >gi|330469860|ref|YP_004407603.1| peptide chain release factor 1 [Verrucosispora maris AB-18-032] gi|328812831|gb|AEB47003.1| peptide chain release factor 1 [Verrucosispora maris AB-18-032] Length = 362 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 111/350 (31%), Positives = 170/350 (48%), Gaps = 16/350 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L + DP + + A+ + R L E++ D EL Sbjct: 6 LARLLDEYAELEKRLADPAIHADQGTARRVGRRYAELVPLHKAAAELEQARADLAAAREL 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A E+ + ET E + + D+ D +E+ AG GG ES +A Sbjct: 66 AAEDPSFAAEAETLAAELPALEERLAELL--IPRDPHDAKDVIVEIKAGEGGEESALFAG 123 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVH 188 LLRMYTR+AE+R + TE ++ D + G+K +L IK + LK E GVH Sbjct: 124 DLLRMYTRYAERRGWLTEVIDAQDSDLGGVKDVSLAIKTKGVPEGGNGVWSRLKWEGGVH 183 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS + + V P + +++ I ++ RID +R+SG GGQ VNTTDS Sbjct: 184 RVQRVPVTESQGRIHTSAAGVLVLP-EAEEVDVTIDPNELRIDVFRSSGPGGQSVNTTDS 242 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE--- 305 AVRITH+PTG+VV CQ E+SQ +N+ QA +LRA+L L + + A ++ K + Sbjct: 243 AVRITHLPTGIVVSCQNEKSQLQNREQAMRILRARL--LAAAQEQADAAASDARKAQVRT 300 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + +IR+Y P + D R + L G+LD + A + Sbjct: 301 VDRSERIRTYNF-PQNRITDHRIGYTAYNLDLALAGELDGVLDALSEADR 349 >gi|85713812|ref|ZP_01044802.1| Peptide chain release factor 1 [Nitrobacter sp. Nb-311A] gi|85699716|gb|EAQ37583.1| Peptide chain release factor 1 [Nitrobacter sp. Nb-311A] Length = 358 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 106/349 (30%), Positives = 172/349 (49%), Gaps = 16/349 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + R + L + + + RE L+ + +K+ + + + + Sbjct: 7 LDLLLARHAALENELLS---HVSADRYVQMTRELAELNPVVEAVKDWRAITAEIAGIDAM 63 Query: 76 ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + ++ ++ + ++ + L D + LEV AG GG E+ Sbjct: 64 IADPATDAEMRAMAEAERPALEARNNELMQQIRIALLPKDAMDERNVMLEVRAGTGGDEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A + +K E + +G G K ++G AY +K E GVHR+ Sbjct: 124 SLFAGDLFRMYERFAALQGWKVEVISASEGTMGGYKEIVAEVQGRGAYAKMKFESGVHRV 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + +++EI D RI+T RA GAGGQHVN T+SA+ Sbjct: 184 QRVPDTEAQGRVHTSAATVAVLP-EAEEVDVEIKPDDLRIETMRAQGAGGQHVNKTESAI 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG+VV Q RSQHKN+A A N+LR+++Y++E Q+ A K ++G G Sbjct: 243 RITHIPTGIVVNMQDSRSQHKNRASAMNILRSRIYDVERQRIN--AARSADRKDQVGSGD 300 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 +IR+Y P V D R N+ V+ GD L + + A + Sbjct: 301 RSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGDALHELIDALTTEHQ 348 >gi|92116091|ref|YP_575820.1| peptide chain release factor 1 [Nitrobacter hamburgensis X14] gi|119361567|sp|Q1QQY7|RF1_NITHX RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|91798985|gb|ABE61360.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrobacter hamburgensis X14] Length = 361 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 106/349 (30%), Positives = 169/349 (48%), Gaps = 16/349 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + R + L + + RE L+ + +K + + + + Sbjct: 9 LDILLARHAALENELLSQ--IS-AERYVQMTRELSELNPVVEAVKNWRAVKTEIAGIDAM 65 Query: 76 ALEEDDCSILQETSDNLQRIK-----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + ++ ++ + + + L D + LE+ AG GG E+ Sbjct: 66 IADPATDAEMRAMAEAERPALGARGDELAQKIRVALLPKDAMDERNVMLEIRAGTGGDEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A + +K EA+ +G G K ++G AY LK E GVHR+ Sbjct: 126 SLFAGDLFRMYERFAGLQGWKVEAISASEGTMGGYKEIVAEVRGRGAYAKLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + ++++I D RI+T RA GAGGQHVN T+SA+ Sbjct: 186 QRVPDTETQGRVHTSAATVAVLP-EAEEVDVDIKTDDLRIETMRAQGAGGQHVNKTESAI 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG+VV Q RSQHKN+A A N+LR+++Y+ E Q+ A K ++G G Sbjct: 245 RITHIPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAERQRIN--AARSADRKDQVGSGD 302 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 +IR+Y P V D R N+ V+ GD L + + A + Sbjct: 303 RSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGDALHELIDALTTEHQ 350 >gi|224437763|ref|ZP_03658710.1| peptide chain release factor 1 [Helicobacter cinaedi CCUG 18818] gi|313144209|ref|ZP_07806402.1| peptide chain release factor 1 [Helicobacter cinaedi CCUG 18818] gi|313129240|gb|EFR46857.1| peptide chain release factor 1 [Helicobacter cinaedi CCUG 18818] Length = 354 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 112/345 (32%), Positives = 177/345 (51%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 V R +++ + +V + L +E+ ++ + K L L Sbjct: 6 LKPIVARYDEISSLLLSQEILSSVKQLTQLSKEQSDIEPIVQSAKMYFSVLEGIADNRAL 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ + +E L+ K E+E + L DS + YLE+ AG GG E+ + Sbjct: 66 LEDKELGELAKEELKELESKKAELEEEIKLLLIPKDPNDSKNIYLEIRAGTGGDEAGIFV 125 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L + Y R+A+ +K+K E + + G K LIKG +Y LK E G HR+ R+ Sbjct: 126 GDLFKAYCRYADLQKWKVEIISSSENNVGGYKEVIALIKGQGSYSKLKYEGGTHRVQRVP 185 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P D +E+ I+ SD +ID +R+ G GGQ VNTTDSAVRITH Sbjct: 186 ETESQGRIHTSAITVAIMP-EVDDVEVNINPSDLKIDVFRSGGHGGQSVNTTDSAVRITH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+ V Q E+SQHKNK +A +L+A+LYE EL+ + E+ KT++G G + Sbjct: 245 IPTGISVSMQDEKSQHKNKDKALKILKARLYEAELEAQNAQNK--EARKTQVGSGDRSER 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 IR+Y P + D R + S +++ G LD+ + +A + Sbjct: 303 IRTYNY-PQNRLTDHRIGLTLYSLEEIMLGGLLDECINPLIAHAQ 346 >gi|254521606|ref|ZP_05133661.1| peptide chain release factor 1 [Stenotrophomonas sp. SKA14] gi|219719197|gb|EED37722.1| peptide chain release factor 1 [Stenotrophomonas sp. SKA14] Length = 360 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 106/323 (32%), Positives = 169/323 (52%), Gaps = 8/323 (2%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS-DN 91 P + + + L RE L+ + + + D + + D + E Sbjct: 26 PDVVADNTRFRDLSREFAQLEPVAAALADEARAKADLAAAEGMRADPDLRELADEEIGAA 85 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 R++ + + D + +LEV AG GG E+ +A L RMY R+AE++ +K Sbjct: 86 QTRLQQLEQELALLLVPRDPRDEGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWK 145 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E + GE G K + G A+ LK E G HR+ R+ +S R HTS +++ + Sbjct: 146 VEIESDNPGEHGGYKEVVARVVGRGAFSRLKFESGTHRVQRVPATESQGRIHTSAATVAI 205 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P D+ +I I+ +D ++DT+R+SGAGGQHVN T+SA+RITH+PTGVVV+CQ ERSQH Sbjct: 206 IPETDEVDDIVINPADLKVDTFRSSGAGGQHVNKTESAIRITHVPTGVVVECQTERSQHA 265 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRT 328 N+ +A L+A+L + E Q+++ A ES + ++G G +IR+Y P + D R Sbjct: 266 NRDKAMKRLKAQLLDAERQRQD--AAQAESRRLQVGSGDRSQRIRTYNF-PQGRITDHRV 322 Query: 329 -NIEKTSPSDVLDGDLDDFMKAT 350 + ++L GDLD ++ Sbjct: 323 EGLTLYDLPNILAGDLDPLLQRL 345 >gi|219684506|ref|ZP_03539449.1| peptide chain release factor 1 [Borrelia garinii PBr] gi|219671868|gb|EED28922.1| peptide chain release factor 1 [Borrelia garinii PBr] Length = 357 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 125/342 (36%), Positives = 189/342 (55%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++A ++ L K +D +L +N + +++E HL+ + E + L + Sbjct: 6 LNSATSKIKSLEEKLQDINLIKNQKKYSKIIKEYTHLEKINTKKIEYEKILSQINDNKTI 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 +ED + + L + + E + L E DS + +E+ AG GG E+ Sbjct: 66 LEKEDQQEMKELIKQELIDLDKKREDLEHQIKILLLPQDENDSKNIIIEIRAGTGGEEAA 125 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +AN L MY +++E++K+KTE + ++ E G K IKG + + LK E GVHR+ Sbjct: 126 LFANNLYSMYIKYSERKKWKTEIINFNETELGGFKEIVFEIKGKDVFKKLKYESGVHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +SN R TS +++ V P ++++ I+E D RID YR+SGAGGQHVNTTDSAVR Sbjct: 186 RIPITESNGRLQTSAATVAVLPNIEETEID-INEKDLRIDVYRSSGAGGQHVNTTDSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VVQCQ ERSQHKNK QA +LRA+LYE E K++E + K ++G G Sbjct: 245 ITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P + D R NI + + G+LD + Sbjct: 303 SERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDQLLDPL 343 >gi|294085498|ref|YP_003552258.1| protein chain release factor A [Candidatus Puniceispirillum marinum IMCC1322] gi|292665073|gb|ADE40174.1| Protein chain release factor A [Candidatus Puniceispirillum marinum IMCC1322] Length = 358 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 116/348 (33%), Positives = 182/348 (52%), Gaps = 14/348 (4%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA---ISFIKEIQDRLCDNLILL 73 D + R + + D V E RE L I ++ + L D +++ Sbjct: 8 DKVLARRTEVENILNDAASLS-VDEMANFARELSELRPVCEQIELVQRLTSELSDAEVMV 66 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGTESQ 131 A ++ D + + ++ E ++ + L D+ +A LEV AG GG E+ Sbjct: 67 GEAGDDPDMLEMARLEMQELQAQIPDEQQKLQLLLLPKDRDDARNAILEVRAGTGGDEAA 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A+ L MY R++ K +K E +E+ + G K AT I G + + LK E GVHR+ Sbjct: 127 LFASDLFGMYQRFSAKYGWKFEVMEVSETGIGGYKEATATITGSDVFARLKFESGVHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P + +++E+ ESD RID +RASG GGQ VNTTDSAVR Sbjct: 187 RVPETETGGRIHTSAATVAVLP-EAEDVDVEVVESDLRIDVFRASGPGGQSVNTTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV Q E+SQHKN+A+A +LRA+LY+ E + + K ++G G Sbjct: 246 ITHMPTGIVVSQQDEKSQHKNRAKAMKILRARLYDAERARVQAER--AADRKGQVGSGDR 303 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 +IR+Y P V D R N+ V+ G+ LD+ + A ++ + Sbjct: 304 SERIRTYNF-PQGRVTDHRINLTLYKLDRVIAGEALDEVIDALISEDQ 350 >gi|297379299|gb|ADI34186.1| peptide chain release factor 1 [Helicobacter pylori v225d] Length = 352 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 105/345 (30%), Positives = 179/345 (51%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R L + + ++ + L +E+ ++ KE L D EL Sbjct: 8 LSSILKRYDELTALLSNAEVISDIKKLTELSKEQSSIEEISVASKEYLSVLEDIKENKEL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ + +E L+ K ++E + + D + YLE+ AG GG E+ + Sbjct: 68 LEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L + Y R+A+ +K+K E + + G K LIKG Y LK E G HR+ R+ Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PT + V Q E+SQHKNK +A +L+A+LYE ++++++ + K ++G G + Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + + R N+ S +++ G+LD+ + +A + Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348 >gi|56751903|ref|YP_172604.1| peptide chain release factor 1 [Synechococcus elongatus PCC 6301] gi|81301012|ref|YP_401220.1| peptide chain release factor 1 [Synechococcus elongatus PCC 7942] gi|81561678|sp|Q5N0T6|RF1_SYNP6 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119361627|sp|Q31L36|RF1_SYNE7 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|56686862|dbj|BAD80084.1| peptide chain release factor RF-1 [Synechococcus elongatus PCC 6301] gi|81169893|gb|ABB58233.1| bacterial peptide chain release factor 1 (bRF-1) [Synechococcus elongatus PCC 7942] Length = 368 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 103/348 (29%), Positives = 180/348 (51%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + Q L + DP + + E + + R R ++ ++ +E + R + E+ Sbjct: 10 LQSVEQTFQDLTRRLADPEIATDPREFQRVARMRSSMEELVTTYEEWKQRDAELKGAREI 69 Query: 76 ALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E L+E + E + L D + LE+ AG GG E+ Sbjct: 70 LRESSGDPELREMAALEVNELEALLVSLEERLKILLLPRDPNDDKNIMLEIRAGTGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA LLRMY+R+AE + ++ + L GE G K A L I+G + Y LK E GVHR+ Sbjct: 130 SLWAGDLLRMYSRYAESQGWRVKLLSESTGELGGYKEAILEIQGESVYSKLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ + P D +E+ I D + T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPATEAGGRVHTSTATVAIMP-EVDEVEVSIDPKDIELTTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ + C +ERSQ +N+ +A +LRAKLYE++LQ+++E + ++++G G Sbjct: 249 DLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLQEQQE--AVSSMRRSQVGTGS 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + D R + + + VL+G++++ ++A ++ + Sbjct: 307 RSEKIRTYNYKD-NRATDHRLGLNFS-LNPVLEGEIEEVIQACISKDQ 352 >gi|208434043|ref|YP_002265709.1| peptide chain release factor RF-1 [Helicobacter pylori G27] gi|238058715|sp|B5Z680|RF1_HELPG RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|208431972|gb|ACI26843.1| peptide chain release factor RF-1 [Helicobacter pylori G27] Length = 352 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 105/345 (30%), Positives = 178/345 (51%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R L + ++ + L +E+ ++ KE L D EL Sbjct: 8 LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLEDIKENKEL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ + +E L+ K ++E + + D + YLE+ AG GG E+ + Sbjct: 68 LEDKELSELAKEELKILETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L + Y R+A+ +K+K E + + G K LIKG Y LK E G HR+ R+ Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PT + V Q E+SQHKNK +A +L+A+LYE ++++++ + K ++G G + Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + + R N+ S +++ G+LD+ + +A + Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348 >gi|169838345|ref|ZP_02871533.1| Protein chain release factor B [candidate division TM7 single-cell isolate TM7a] Length = 243 Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 144/242 (59%), Positives = 183/242 (75%) Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 N+A L +++GAGGTE+ DWA ML RMY RWA + FK E L+ GEEAGIKS TL IK Sbjct: 1 MNNAILTINSGAGGTEACDWAEMLYRMYDRWANRHNFKVEVLDSLAGEEAGIKSITLNIK 60 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G AYG+LKGE+GVHRLVRISP+DSN+RRHTSF+++ V P ++D ++I+I D ++DTY Sbjct: 61 GNYAYGYLKGEKGVHRLVRISPFDSNARRHTSFAAVNVTPEIEDDVKIDIRPEDLKVDTY 120 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 RASGAGGQHVNTTDSAVRITHIPT VV CQ ERSQ KN+ A +L++KL+ELEL+KRE Sbjct: 121 RASGAGGQHVNTTDSAVRITHIPTNTVVTCQNERSQLKNRETAMKILKSKLFELELEKRE 180 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + + ++++I WG QIRSYV QPY+MVKD RT E+ + V+DGD+D F+ L Sbjct: 181 KEMAELKGTESKIEWGSQIRSYVFQPYKMVKDHRTKAEEGNVEKVMDGDIDLFINEYLKY 240 Query: 354 KK 355 K Sbjct: 241 AK 242 >gi|219685818|ref|ZP_03540627.1| peptide chain release factor 1 [Borrelia garinii Far04] gi|219672651|gb|EED29681.1| peptide chain release factor 1 [Borrelia garinii Far04] Length = 357 Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats. Identities = 125/342 (36%), Positives = 189/342 (55%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++A ++ L K +D +L +N + +++E HL+ + E + L + Sbjct: 6 LNSATTKIKSLEEKLQDVNLIKNQKKYSKIIKEYTHLEKINTKKIEYEKILSQINDNKTI 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 +ED + + L + + E + L E DS + +E+ AG GG E+ Sbjct: 66 LEKEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGTGGEEAA 125 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +AN L MY +++E++K+KTE + ++ E G K IKG + + LK E GVHR+ Sbjct: 126 LFANNLYSMYIKYSERKKWKTEIINFNETELGGFKEIVFEIKGKDVFKKLKYESGVHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +SN R TS +++ V P ++++ I+E D RID YR+SGAGGQHVNTTDSAVR Sbjct: 186 RIPITESNGRLQTSAATVAVLPNIEETEID-INEKDLRIDVYRSSGAGGQHVNTTDSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VVQCQ ERSQHKNK QA +LRA+LYE E K++E + K ++G G Sbjct: 245 ITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P + D R NI + + G+LD + Sbjct: 303 SERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDQLLDPL 343 >gi|225011020|ref|ZP_03701485.1| peptide chain release factor 2 [Flavobacteria bacterium MS024-3C] gi|225004825|gb|EEG42782.1| peptide chain release factor 2 [Flavobacteria bacterium MS024-3C] Length = 288 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 133/280 (47%), Positives = 188/280 (67%) Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 + + E Q +E +F ++LS E D+ A L++ AGAGGTES DW Sbjct: 1 MMEFADAGEITEDELKIAYQNTLDVLEDLEFRNMLSEEGDNLSAVLQITAGAGGTESCDW 60 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A ML+RMY W++K FK + L +G+ AG+K+ TL I+G A+GWLKGE GVHRLVRI Sbjct: 61 AAMLMRMYMMWSQKAGFKIKELNYQEGDVAGVKTVTLGIEGDFAFGWLKGENGVHRLVRI 120 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 SP+DSN++RHTSF+S++VYP++DDSIEI I+ +D R+ GAGGQ+VN ++ V +T Sbjct: 121 SPFDSNAKRHTSFASVYVYPLIDDSIEIVINPADISWAFARSGGAGGQNVNKVETKVILT 180 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H PTG+++ + RSQ N+ A +L+++LYE+EL+KR+E + ESSK +I WG QIR Sbjct: 181 HHPTGIIIHNSETRSQLDNRENAMKLLKSQLYEIELRKRQEARSEIESSKMKIEWGSQIR 240 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +YVL PY++VKD+R+ E VLDG LD F+K L + Sbjct: 241 NYVLHPYKLVKDVRSGTETGDVDAVLDGHLDPFLKGFLML 280 >gi|13508100|ref|NP_110049.1| peptide chain release factor 1 [Mycoplasma pneumoniae M129] gi|2500138|sp|P75420|RF1_MYCPN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|1674166|gb|AAB96123.1| peptide chain release factor 1 [Mycoplasma pneumoniae M129] Length = 359 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 107/347 (30%), Positives = 174/347 (50%), Gaps = 14/347 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+ L P L I+A + +E +H + KE + + L + Sbjct: 11 VEKIVELAEQLEKDLNKPDLTFEQIKA--INKELKHKQPLVVKFKEFKRLIDQALEAEAI 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 + + E L+R++ V + L E + + +E+ AGG ES Sbjct: 69 LENNELKELHDEAKKELERVRSVVPEYEEALKLLLLPIDENNQKNVIVELRPAAGGDESC 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + L MY + + +K + E+ G+ + + G + + LK E GVHR+ Sbjct: 129 IFLADLFNMYRNFCSNKGWKLQINEMIPSSV-GLNFVSFEVNGVDVFAKLKFESGVHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS ++ V P ++ +E+ I+ +D R+DTYRASGAGGQHVN T+SAVR Sbjct: 188 RVPATESKGRVHTSTVTVAVLPQLEA-VEVHINPADLRVDTYRASGAGGQHVNRTESAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV CQ+ +SQ N+ A MLRAKL+ E + E+++ K+++G G Sbjct: 247 ITHLPTGIVVSCQEGKSQFTNRDTAMKMLRAKLW--EKAQNEQLSTQAGLRKSQVGSGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + + ++ GDLD+ ++A A +K Sbjct: 305 AEKIRTYNY-PQNRVTDHRIKLTVNKLNTIILGDLDEIIEALQADEK 350 >gi|51598456|ref|YP_072644.1| peptide chain release factor 1 [Borrelia garinii PBi] gi|61214604|sp|Q662G9|RF1_BORGA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|51573027|gb|AAU07052.1| peptide chain release factor 1 [Borrelia garinii PBi] Length = 357 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 123/342 (35%), Positives = 189/342 (55%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++A ++ + K +D +L +N + +++E +L+ + E + L + Sbjct: 6 LNSATSKIKLIEEKLQDINLIKNQKKYSKIIKEYTYLEKINTKKIEYEKILSQINDNKTI 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 +ED + + L + + E + L E DS + +E+ AG GG E+ Sbjct: 66 LEKEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGTGGEEAA 125 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +AN L MY +++E++K+KTE + ++ E G K IKG + + LK E GVHR+ Sbjct: 126 LFANNLYSMYIKYSERKKWKTEIINFNETELGGFKEIVFEIKGKDVFKKLKYESGVHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +SN R TS +++ V P ++++ I+E D RID YR+SGAGGQHVNTTDSAVR Sbjct: 186 RIPITESNGRLQTSAATVAVLPNIEETEID-INEKDLRIDVYRSSGAGGQHVNTTDSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VVQCQ ERSQHKNK QA +LRA+LYE E K++E + K ++G G Sbjct: 245 ITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P + D R NI + + G+LD + Sbjct: 303 SERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDPLLDPL 343 >gi|281358665|ref|ZP_06245143.1| peptide chain release factor 1 [Victivallis vadensis ATCC BAA-548] gi|281314895|gb|EFA98930.1| peptide chain release factor 1 [Victivallis vadensis ATCC BAA-548] Length = 362 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 107/344 (31%), Positives = 172/344 (50%), Gaps = 11/344 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN----LI 71 +N R + L DP ++ E + + +E + L+ + + L + + Sbjct: 10 IENLHGRFAELEAALADPAIYARGAECRRVSQEHRKLETLFRKFDDWRKALAELADNREM 69 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L E I + +D +R + Q L D+ + + + AGG E+ Sbjct: 70 LTAETDAELRELIAADIADLEERAQKLEADIQISLLPPDPNDAKNIIVGIKPAAGGDEAA 129 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L R Y ++AEK+ ++ E L+ D E GIK + + G Y +K E GVHR+ Sbjct: 130 LFAGELFRAYMKFAEKKGWRIEVLDQTDTELGGIKDVSFSLSGDEVYSLMKYESGVHRVQ 189 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS ++ V P + +E++I D R D +R+SG GGQ VNTTDSAVR Sbjct: 190 RVPATEAGGRIHTSTVTVAVMP-EAEEVELDIRPEDLRFDVFRSSGPGGQCVNTTDSAVR 248 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 +THIPTG+ V QQE+SQH+NK A +L A+L LE +++EE ++++G G Sbjct: 249 VTHIPTGIAVASQQEKSQHRNKEIALRILYARL--LEHKQQEEADKQAADKRSQVGTGDR 306 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 +IR+Y P V D R N+ +++G+LD + L Sbjct: 307 SERIRTYNF-PQNRVTDHRFNVNTFDLPKLMEGELDLILDQILM 349 >gi|195941927|ref|ZP_03087309.1| peptide chain release factor 1 [Borrelia burgdorferi 80a] Length = 357 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 122/347 (35%), Positives = 190/347 (54%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ ++ + K +D +L ++ + +++E +L+ + E + L + Sbjct: 6 LNSTTSKIKLIEEKLQDINLIKDQKKYSKIIKEYTYLEKINTKKIEYEKILSQINDTKTI 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 +ED + + L + + E + L E DS + +E+ AG GG E+ Sbjct: 66 LEKEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGTGGEEAA 125 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +AN L MY +++EK+K+KTE + ++ E G K IKG + + LK E GVHR+ Sbjct: 126 LFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +SN R TS +++ V P ++++ I+E D RID YR+SGAGGQHVNTTDSAVR Sbjct: 186 RIPITESNGRLQTSAATVAVLPNIEETEID-INEKDLRIDVYRSSGAGGQHVNTTDSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VVQCQ ERSQHKNK QA +LRA+LYE E K++E + K ++G G Sbjct: 245 ITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R NI + + G+LD + + + Sbjct: 303 SERIRTYNF-PQNRITDHRANITLYRLEEFMQGELDPLLDPLMIALQ 348 >gi|300858256|ref|YP_003783239.1| peptide chain release factor RF-1 [Corynebacterium pseudotuberculosis FRC41] gi|300685710|gb|ADK28632.1| peptide chain release factor RF-1 [Corynebacterium pseudotuberculosis FRC41] gi|302205977|gb|ADL10319.1| Peptide chain release factor 1 [Corynebacterium pseudotuberculosis C231] gi|302330530|gb|ADL20724.1| Peptide chain release factor 1 [Corynebacterium pseudotuberculosis 1002] gi|308276212|gb|ADO26111.1| Peptide chain release factor RF-1 [Corynebacterium pseudotuberculosis I19] Length = 356 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 113/347 (32%), Positives = 176/347 (50%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ V + + DP + + + L + L I+ ++ D + E+ Sbjct: 7 VDDIVSEYQGIEAQMADPETMGDQMLFRKLSKRYSELQPIINVNNKLVQARDDYEVAKEM 66 Query: 76 -ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + ++ ++ D +D +EV AGAGG E+ +A Sbjct: 67 AHEDHEFQEEAARLETEVVVLEEQLAD---LLAPRDPHDGDDIVMEVKAGAGGEEAALFA 123 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHR 189 L+RMY R+A+K F E L+ + + G+K TL I+ A+ K E GVHR Sbjct: 124 GELVRMYQRYADKHGFAIEVLDSSESDLGGVKDMTLSIRSKTPSRDGAWSVFKFEGGVHR 183 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R TS + + VYP D+ EIEI + D RID YR+SG GGQ VNTTDSA Sbjct: 184 VQRVPVTESQGRIQTSAAGVLVYPEPDEVAEIEIDDKDLRIDVYRSSGKGGQGVNTTDSA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308 VRITH+PTG+VV CQ+ERSQ +NKA+A +L A+L + ++ E A G +++ + Sbjct: 244 VRITHLPTGLVVTCQKERSQIQNKARAMQVLAARLQSMAEEQAEAEAAEGRAAQIRTMDR 303 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + + VL+G+LDD A A ++ Sbjct: 304 SERIRTYNW-PENRISDHRIGFKANNLDSVLNGELDDLFTALRAAER 349 >gi|241116888|ref|XP_002401657.1| protein releasing factor, putative [Ixodes scapularis] gi|215493201|gb|EEC02842.1| protein releasing factor, putative [Ixodes scapularis] Length = 358 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 123/347 (35%), Positives = 184/347 (53%), Gaps = 16/347 (4%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + + + L K + + E +E L + ++ IKE + Sbjct: 9 NLAKILDKYENLGKKLSS-GIMGD--EFVKASKEYAELKDVVAKIKEYNKAKSELEEANN 65 Query: 75 LALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LE + E ++ + L +ADS A +EV AG+GG E Sbjct: 66 FKLEVGLDNATLEMIEDEIHTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGGEE 125 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A +L MY R+AE + ++ E L I D G K A+ LIKG + + LK E GVHR Sbjct: 126 AALFAAVLFNMYQRYAELKGWRFEILAISDMGIGGYKEASALIKGKDVFSKLKFESGVHR 185 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS +++ V P + ++I+I + D +IDTYRASGAGGQHVNTTDSA Sbjct: 186 VQRVPETESQGRIHTSAATVAVLP-EAEEVDIKIEDKDLKIDTYRASGAGGQHVNTTDSA 244 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPT + V Q E+SQHKNKA+A +LRA++YE E R++ +S + ++G G Sbjct: 245 VRITHIPTSITVALQDEKSQHKNKAKALKILRARIYEEER--RKKEQERADSRRGQVGSG 302 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352 +IR+Y P V D R N+ +V+ +G LD+F++A +A Sbjct: 303 DRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 348 >gi|149185458|ref|ZP_01863774.1| protein chain release factor A [Erythrobacter sp. SD-21] gi|148830678|gb|EDL49113.1| protein chain release factor A [Erythrobacter sp. SD-21] Length = 355 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 112/344 (32%), Positives = 173/344 (50%), Gaps = 11/344 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R + L + L + E R+ L+ E++ + L ++ Sbjct: 8 LDQIAHRFAELEARMASGTLEGD--EFVQASRDYAELEPVAKVAAEVKAAREEIASLEDM 65 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + ++ +E LQ+ L AD+ A LE+ AG GG E+ +A Sbjct: 66 LADPEMKAMAEEELAELQKRLPAAERQLAIAMLPRDSADNKPAMLEIRAGTGGDEAALFA 125 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+A + +K E + ++ E G K + GPN + LK E GVHR+ R+ Sbjct: 126 GDLFRMYERYAAEMGWKVEPVSMNASEVGGFKEIVASVTGPNVFAKLKFESGVHRVQRVP 185 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P D +++++ ++ +IDTYRASGAGGQHVNTTDSA+RITH Sbjct: 186 ETESGGRIHTSAATVAVLP-EPDEVDVQLDPTELKIDTYRASGAGGQHVNTTDSAIRITH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG VV CQ RSQHKNK +A +LR +LY+ + + E+ K +G G + Sbjct: 245 LPTGTVVTCQDGRSQHKNKEKAMQVLRTRLYDAQRE--ATQGAEAEARKAMVGSGDRSER 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIK 354 IR+Y P V D R + ++ G L + ++A +A Sbjct: 303 IRTYNY-PQGRVTDHRIGLTLQKLPQIIAGPGLAELVEALIAED 345 >gi|67923568|ref|ZP_00517041.1| Peptide chain release factor 1 [Crocosphaera watsonii WH 8501] gi|67854594|gb|EAM49880.1| Peptide chain release factor 1 [Crocosphaera watsonii WH 8501] Length = 370 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 99/348 (28%), Positives = 178/348 (51%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + Q L + DP + N E + + + R L+ ++ + Q+ + ++ Sbjct: 10 LQSVEQTYQELTRRLADPDIATNPDELQRVAKLRSSLEETVNTYQTWQETQEELKGAKQI 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130 E ++E + E + + L D + LE+ AG GG E+ Sbjct: 70 LKEAGSDPEMREMASMEVSELEENIEQLEERLKILLLPRDPNDDKNIMLEIRAGTGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L+RMY+R+AE +++ + + + G K A L I G Y LK E GVHR+ Sbjct: 130 SIWAGDLVRMYSRYAESQRWNVKLVSESLADMGGFKEAILEITGEQVYSKLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ + P D +EIEI D + T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPVTEAGGRVHTSTATVAIMP-EVDDVEIEIDPKDIEMTTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ + C +ERSQ +N+ +A +LRAKLYE++L++++E + ++++G G Sbjct: 249 DLMHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLREQQE--AVSSMRRSQVGTGS 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D R + + + L+GD+D+ +++ ++ + Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLS-QNFALVGALEGDIDNIIESCISQDQ 352 >gi|145352937|ref|XP_001420790.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144581025|gb|ABO99083.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 343 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 93/334 (27%), Positives = 165/334 (49%), Gaps = 13/334 (3%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 DP + + E + L + L + + ++ + + +A + + + Sbjct: 1 MADPSVTGDPKEFQKLSKALGELTSVVEQYARYKECMKEISEARAMAKDAAGDDEMVAMA 60 Query: 90 DNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 E++ D + LE+ AG GG E+ WA L RMY R+ Sbjct: 61 KEEIDALTTESDALVETMTLALLPKDPLDEKNIMLEIRAGTGGDEAGIWAGDLYRMYMRF 120 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 AE+ ++T + + + G K + IKG + Y LK E GVHR+ R+ ++ R T Sbjct: 121 AEREGWQTSVVTNNPADAGGYKEIVVEIKGDDVYSSLKWEAGVHRVQRVPATETQGRIQT 180 Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 S +++ V P D +E++I ++D I T R+ GAGGQ+VN ++A+ + H PTG+ V C Sbjct: 181 STATVAVMP-EVDEVEVKIDDNDLDISTARSGGAGGQNVNKVETAIDLMHKPTGIRVFCT 239 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQ 321 +ER+Q KN+ +A +LRAKL+EL+L+++ + + K+++G G +IR+Y + Sbjct: 240 EERTQMKNRIRAMQILRAKLFELQLEEQR--KAVSDKRKSQVGSGSRSEKIRTYNWKD-S 296 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 V D R + + LDGD+ + A+++ Sbjct: 297 RVSDHRIGANFS-LQNFLDGDIKGAIGGMQALEQ 329 >gi|116072171|ref|ZP_01469439.1| peptide chain release factor 1 [Synechococcus sp. BL107] gi|116065794|gb|EAU71552.1| peptide chain release factor 1 [Synechococcus sp. BL107] Length = 365 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 97/348 (27%), Positives = 164/348 (47%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLIL 72 A L + DP + + + + RER L+ + +++++ D L Sbjct: 10 LQTATASFRSLERQLADPDVANDPKRLETIARERSRLEPLVLDFEALQKLEQEQVDAREL 69 Query: 73 LELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L + + L + + ++ L D LE+ AGAGG E+ Sbjct: 70 LRESRSDAAMQELAQNELCELEAQHAALLQRLTLALLPRDPRDDRSVMLEIRAGAGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY R+ +K + + L + + G + + +KG + + LK E GVHR+ Sbjct: 130 CIWAGDLARMYERYGQKLGWSVQQLSCTEADLGGYRELIVSVKGASVFSQLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P D++E+++ D I T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADAVEVQLDPKDLEISTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ V C Q+RSQ +N+ +A +LRAKL LE + ++++G G Sbjct: 249 DLLHKPTGIRVFCTQQRSQLQNRERALEILRAKL--LERELAAAAERESSDRRSQVGSGD 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + D R + VL G L+D + A +A ++ Sbjct: 307 RSEKIRTYNYKD-NRTTDHRLGRNFS-LEPVLQGQLEDLIGACIAEEQ 352 >gi|294155813|ref|YP_003560197.1| peptide chain release factor 1 [Mycoplasma crocodyli MP145] gi|291600475|gb|ADE19971.1| peptide chain release factor 1 [Mycoplasma crocodyli MP145] Length = 358 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 108/346 (31%), Positives = 174/346 (50%), Gaps = 11/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72 N + + + DP++ ++ + + +E ++ + + + + Sbjct: 9 LTNIKNKYNEMQEMLNDPNVINDIKKYTKINKELNSIEEIVKCFNHYLNAEQNFKSSKEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L EE E + + + + E + L + D D +E+ AGG E+ Sbjct: 69 LSEKDEEMVELAKIEITQSEEIMTKLTEELKILILPKDKNDDKDVIVEIRGAAGGDEANI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY +W+++ K + L+ + E G T I G AY LK E GVHR+ R Sbjct: 129 FAGDLFRMYQKWSDQNDMKLKVLDENRAEAGGFTLITFSILGDKAYSKLKFESGVHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 I ++ R HTS +++ V P +DD IEIE+ D RID +R+SG GGQ VNTTDSAVRI Sbjct: 189 IPVTETKGRVHTSTATVTVMPEIDDDIEIEVKSEDIRIDVFRSSGNGGQSVNTTDSAVRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH +G+VV CQ+ +SQ +NK A +L++KLY+LEL ++ + G G Sbjct: 249 THASSGIVVSCQEGKSQIQNKEIAMRILKSKLYDLEL---KKKEEEESGYRKLAGSGFRS 305 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + + S V++G L+ + A LA+++ Sbjct: 306 EKIRTYNY-PQDRVTDHRISYSTS-LSPVMEGKLNSIIDALLAMEQ 349 >gi|242069313|ref|XP_002449933.1| hypothetical protein SORBIDRAFT_05g025920 [Sorghum bicolor] gi|241935776|gb|EES08921.1| hypothetical protein SORBIDRAFT_05g025920 [Sorghum bicolor] Length = 412 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 101/348 (29%), Positives = 180/348 (51%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+A + ++ + DP + + E + L + LD ++ ++ +D L Sbjct: 54 LDSAEKAWKEMSVRLADPDIVSDPSEYQKLAQSVSELDQVVTTYRQFKDCERQLEETKAL 113 Query: 76 ALEEDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E +D + E ++ E + L S DS + LEV AGAGG E+ Sbjct: 114 EKENEDDPDMSEMITSELEALSNQLAELEEKLKLLLLPSDPLDSRNILLEVRAGAGGDEA 173 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L+RMY ++ E+ +K + + + + G K+ + +KG Y LK E GVHR+ Sbjct: 174 GIWAGDLVRMYQKYCERNNWKFKPVSCSEADMGGYKTYVMEVKGKQVYSKLKFESGVHRV 233 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ + P D +++ I D + T R+ GAGGQ+VN ++AV Sbjct: 234 QRVPLTETMGRVHTSTATVAIMP-EADEVDVVIDPKDIELKTARSGGAGGQNVNKVETAV 292 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ + C +ERSQ +NK +A+ +LRAKLYE++L++++E +I K ++G G Sbjct: 293 DLIHKPTGIRIFCTEERSQLQNKERAFQLLRAKLYEIKLREQQE--SIRNQRKMQVGTGA 350 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D R + + L GD++ +++ +++ Sbjct: 351 RSEKIRTYNYKD-NRVTDHRLKM-NYELTGFLLGDIESAVQSCATLEQ 396 >gi|315122704|ref|YP_004063193.1| peptide chain release factor 1 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496106|gb|ADR52705.1| peptide chain release factor 1 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 357 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 114/347 (32%), Positives = 174/347 (50%), Gaps = 18/347 (5%) Query: 18 NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 N R S + + + P + L E + IS I + + + L + Sbjct: 11 NLKNRFSEIELRMSESPSV----DVYIKLTEEYAAISPIISKIDIYEKKKGEEQDLRTII 66 Query: 77 LEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ++D +++ + + IK L D LE+ AG GG+E+ Sbjct: 67 DDQDSDLGIRDLAKAEIGEVEKEIKALEYEISCLLLPKDTDDDKSCILEIRAGTGGSEAA 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + L RMY R+A +K+K E L D ++ G K I G + +K E GVHR+ Sbjct: 127 LFVGDLFRMYERYATYQKWKVEILSSSDNDDGGYKEIVATISGNGVFYRMKFESGVHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +++ R HTS +++ V P + I++ I+ D RIDT RASG+GGQHVNTTDSAVR Sbjct: 187 RVPATEASGRVHTSAATVAVLP-EAEEIDVAIATEDIRIDTMRASGSGGQHVNTTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIPTG++V E+SQH+N+ QA +LRA+LY++E ++ E+ K +IG G Sbjct: 246 ITHIPTGIMVTSS-EKSQHQNRLQAMKVLRARLYDIERKRMAHER--SENRKAQIGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N+ VL G LD+ + A L + Sbjct: 303 SERIRTYNF-PQGRITDHRINLTLYKLEYVLQGYLDEIVNALLTAHQ 348 >gi|239947714|ref|ZP_04699467.1| peptide chain release factor 1 [Rickettsia endosymbiont of Ixodes scapularis] gi|239921990|gb|EER22014.1| peptide chain release factor 1 [Rickettsia endosymbiont of Ixodes scapularis] Length = 355 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 123/347 (35%), Positives = 184/347 (53%), Gaps = 16/347 (4%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + + + L K + + E +E L + ++ IKE + Sbjct: 6 NLAKILDKYENLGKKLSS-GIMGD--EFVKASKEYAELKDVVAKIKEYNKAKSELEEANN 62 Query: 75 LALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LE + E ++ + L +ADS A +EV AG+GG E Sbjct: 63 FKLEVGLDNATLEMIEDEIHTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGGEE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A +L MY R+AE + ++ E L I D G K A+ LIKG + + LK E GVHR Sbjct: 123 AALFAAVLFNMYQRYAELKGWRFEILAISDMGIGGYKEASALIKGKDVFSKLKFESGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS +++ V P + ++I+I + D +IDTYRASGAGGQHVNTTDSA Sbjct: 183 VQRVPETESQGRIHTSAATVAVLP-EAEEVDIKIEDKDLKIDTYRASGAGGQHVNTTDSA 241 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPT + V Q E+SQHKNKA+A +LRA++YE E R++ +S + ++G G Sbjct: 242 VRITHIPTSITVALQDEKSQHKNKAKALKILRARIYEEER--RKKEQERADSRRGQVGSG 299 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352 +IR+Y P V D R N+ +V+ +G LD+F++A +A Sbjct: 300 DRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345 >gi|183222627|ref|YP_001840623.1| peptide chain release factor 1 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912661|ref|YP_001964216.1| peptide chain release factor 1 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|238687790|sp|B0SH84|RF1_LEPBA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238687821|sp|B0SQV0|RF1_LEPBP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|167777337|gb|ABZ95638.1| Peptide chain release factor 1 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167781049|gb|ABZ99347.1| Peptide chain release factor 1 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 353 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 102/351 (29%), Positives = 160/351 (45%), Gaps = 15/351 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D ++ + + K L +ER L + E D Sbjct: 1 MIDRLKKIQEKYLRIEDELAKATA---SDTLKNLSKERSRLTPVYTKADEYLKITKDCQD 57 Query: 72 LLELALEEDDCSILQE----TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 L E+D + + ++++ + + L +E+ AG GG Sbjct: 58 AKSLLESENDPDMHSMLKSEIEEGEKKLEELAKELEIMLLPPDPNSGKSILVEIRAGTGG 117 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 ES + L RMY ++A+K+ + E +++ G K + AY K E G Sbjct: 118 EESGLFCADLFRMYNKYADKKGLRVEIIDMSQTGIGGYKEIVFSLDDDKAYDLFKFESGT 177 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +S R HTS ++ + P ++ I ESD RID YR+SGAGGQHVNTTD Sbjct: 178 HRVQRIPETESGGRIHTSAVTVAILPEAEEKEVE-IKESDLRIDVYRSSGAGGQHVNTTD 236 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTG+VV Q+ERSQ KN+ +A +LRA++ + + + K ++G Sbjct: 237 SAVRITHIPTGIVVASQEERSQIKNRDKAMRVLRARIADQAAE--TAKLSADALKKAQVG 294 Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y P D R + +++GDLD+ + A + + Sbjct: 295 SGDRSERIRTYNF-PQGRCTDHRIGFTSHNLPAIMEGDLDELIDALIQEDR 344 >gi|148258772|ref|YP_001243357.1| peptide chain release factor 1 [Bradyrhizobium sp. BTAi1] gi|146410945|gb|ABQ39451.1| bacterial peptide chain release factor 1 (bRF-1) [Bradyrhizobium sp. BTAi1] Length = 361 Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats. Identities = 108/344 (31%), Positives = 169/344 (49%), Gaps = 16/344 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72 D + + L + N + RE L+ I +K + L D L Sbjct: 9 LDVLLAHHASLEAELLGQ---VNSDRYVQITRELAELNPLIEAVKAYRAGVKELADTEAL 65 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTES 130 + + + + E + + ++ L + + LE+ AG GG E+ Sbjct: 66 IADPATDAEMRAMAEAERDELIARRGELEQKIRVALLPKDAMDDRNVVLEIRAGTGGDEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A + +K E + +G G K ++G A+ LK E GVHR+ Sbjct: 126 SLFAGDLFRMYERFASLQGWKVEVISASEGTVGGYKEIIAEVQGRGAFAKLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + ++++I + D RI+T RA GAGGQHVN T+SA+ Sbjct: 186 QRVPDTETQGRIHTSAATVAVLP-EVEEVDVDIKQDDLRIETMRAQGAGGQHVNKTESAI 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG+VV Q RSQHKN+A A N+LR+++Y+ E QK + A K ++G G Sbjct: 245 RITHIPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAERQKVD--AARSAERKEKVGSGD 302 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350 +IR+Y P V D R N+ V+ G+ L + + A Sbjct: 303 RSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGEALGELIDAL 345 >gi|301633339|gb|ADK86893.1| peptide chain release factor 1 [Mycoplasma pneumoniae FH] Length = 359 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 107/347 (30%), Positives = 174/347 (50%), Gaps = 14/347 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+ L P L I+A + +E +H + KE + + L + Sbjct: 11 VEKIVELAEQLEKDLNKPDLTFEQIKA--INKELKHKQPLVVKFKEFKRLIDQALEAEAI 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 + + E L+R++ V + L E + + +E+ AGG ES Sbjct: 69 LENNELKELHDEAKKELERVRSVVPEYEEALKLLLLPIDENNQKNVIVELRPAAGGDESC 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + L MY + + +K + E+ G+ + + G + + LK E GVHR+ Sbjct: 129 IFLADLFNMYRNFCTNKGWKLQINEMIPSSV-GLNFVSFEVNGVDVFAKLKFESGVHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS ++ V P ++ +E+ I+ +D R+DTYRASGAGGQHVN T+SAVR Sbjct: 188 RVPATESKGRVHTSTVTVAVLPQLEA-VEVHINPADLRVDTYRASGAGGQHVNRTESAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV CQ+ +SQ N+ A MLRAKL+ E + E+++ K+++G G Sbjct: 247 ITHLPTGIVVSCQEGKSQFTNRDTAMKMLRAKLW--EKAQNEQLSTQAGLRKSQVGSGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + + ++ GDLD+ ++A A +K Sbjct: 305 AEKIRTYNY-PQNRVTDHRIKLTVNKLNTIILGDLDEIIEALQADEK 350 >gi|255692994|ref|ZP_05416669.1| peptide chain release factor 2 [Bacteroides finegoldii DSM 17565] gi|260621306|gb|EEX44177.1| peptide chain release factor 2 [Bacteroides finegoldii DSM 17565] Length = 319 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 123/315 (39%), Positives = 189/315 (60%), Gaps = 11/315 (3%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M+ + L I E++ + + + ++ ++ + + VE + + Sbjct: 1 MKLVKDLQKWIDGYNEVKTLADELELAFDFYK--EELVTEEDVDTAYAKAREAVEALELK 58 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++L EAD D L++++GAGGTESQDWA+ML+RMY R+AE +K + +G+EAGI Sbjct: 59 NMLRDEADQMDCVLKINSGAGGTESQDWASMLMRMYLRYAETNGYKATIANLQEGDEAGI 118 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ T+ I+G AYG+LKGE GVHRLVR+SPY++ +R TSF+S++V P+VDDSIE+ I Sbjct: 119 KTCTINIEGDFAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNIET 178 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAW 277 + DT+R+ GAGGQ+VN +S VR+ + ++++ + R Q KN+ A Sbjct: 179 ARISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNRENAM 238 Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 LR+ LY+ ELQ R E+ K +I WG QIRSYV + VKD RTN + + + Sbjct: 239 RQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNG 297 Query: 338 VLDGDLDDFMKATLA 352 V+DG ++DF+KA L Sbjct: 298 VMDGKIEDFIKAYLM 312 >gi|111114896|ref|YP_709514.1| peptide chain release factor 2 [Borrelia afzelii PKo] gi|216263773|ref|ZP_03435767.1| peptide chain release factor 2 [Borrelia afzelii ACA-1] gi|110890170|gb|ABH01338.1| peptide chain release factor 2 [Borrelia afzelii PKo] gi|215979817|gb|EEC20639.1| peptide chain release factor 2 [Borrelia afzelii ACA-1] Length = 269 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 137/267 (51%), Positives = 186/267 (69%), Gaps = 1/267 (0%) Query: 88 TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 ++ + + S E D+NDA+L +H+GAGGTE+ DW ML RMY+R+AE+ Sbjct: 1 MEIEFNILEKQYKDLLTISYFKEELDANDAFLTIHSGAGGTEACDWVAMLYRMYSRYAER 60 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 +K+KTE +++ + E GIKS T+ IKG AYG LK E G+HRL+RISP+D+ +RHTSF+ Sbjct: 61 KKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRISPFDAAKKRHTSFA 119 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 S+++ PV+D+ IEI I D RIDTYRASGAGGQHVN T SAVRITHI TG+V Q Q +R Sbjct: 120 SVFIDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITHIETGIVTQSQSDR 179 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 SQHKNK A +L+++LYE K +E + +K EI WG QIRSYV QPY +VKD R Sbjct: 180 SQHKNKDMAMKVLKSRLYEYYKNKEDEKNKSKQDTKKEISWGNQIRSYVFQPYNLVKDHR 239 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354 T E ++ + V+DG++D+F++ L K Sbjct: 240 TKFENSNITSVMDGNIDNFIEEYLKWK 266 >gi|115486501|ref|NP_001068394.1| Os11g0657100 [Oryza sativa Japonica Group] gi|77552370|gb|ABA95167.1| Peptide chain release factor 1, putative, expressed [Oryza sativa Japonica Group] gi|113645616|dbj|BAF28757.1| Os11g0657100 [Oryza sativa Japonica Group] gi|215686469|dbj|BAG87730.1| unnamed protein product [Oryza sativa Japonica Group] gi|215694739|dbj|BAG89930.1| unnamed protein product [Oryza sativa Japonica Group] gi|218186139|gb|EEC68566.1| hypothetical protein OsI_36894 [Oryza sativa Indica Group] gi|222616368|gb|EEE52500.1| hypothetical protein OsJ_34701 [Oryza sativa Japonica Group] Length = 416 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 103/350 (29%), Positives = 184/350 (52%), Gaps = 17/350 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+A + ++ + DP + + E + L + LD +S ++ +D L Sbjct: 58 LDSAEKAWKEMSVRLADPDIVSDPSEYQKLAQSVAELDQVVSTYRQFKDCEKQIEETKVL 117 Query: 76 ALEEDDCSIL-----QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E +D + E +++ E + L + D+ + LEV AGAGG E+ Sbjct: 118 QKENEDDPDMAEMIDSEMESLSNQLEELEEKLKLLLLPNDPLDARNILLEVRAGAGGDEA 177 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L+RMY ++ E+ +K + + + E+ G K+ + +KG Y LK E GVHR+ Sbjct: 178 GIWAGDLVRMYQKYCERNSWKFKPVSSSEAEKGGFKTYVMEVKGKQVYSKLKFESGVHRV 237 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ + P D +++ I D + T R+ GAGGQ+VN ++AV Sbjct: 238 QRVPQTETMGRVHTSTATVAIMP-EADEVDVVIDPKDIELKTARSGGAGGQNVNKVETAV 296 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ + C +ERSQ +N+ +A+ +LRAKLYE++L++++E +I K ++G G Sbjct: 297 DLIHKPTGIRIFCTEERSQLQNRERAFQLLRAKLYEIKLREQQE--SIRNQRKLQVGTGA 354 Query: 310 --RQIRSYVLQPYQMVKDLR--TNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D R N E T L GD++ +++ ++++ Sbjct: 355 RSEKIRTYNYKD-NRVTDHRLKMNFELT---GFLMGDIESAVQSCSSMEQ 400 >gi|22331914|ref|NP_191850.2| APG3 (ALBINO AND PALE GREEN); translation release factor/ translation release factor, codon specific [Arabidopsis thaliana] gi|19699096|gb|AAL90914.1| AT3g62910/T20O10_10 [Arabidopsis thaliana] gi|21928033|gb|AAM78045.1| AT3g62910/T20O10_10 [Arabidopsis thaliana] gi|34392768|dbj|BAC82693.1| Chloroplast Release Factor 1 [Arabidopsis thaliana] gi|332646889|gb|AEE80410.1| Peptide chain release factor 1 [Arabidopsis thaliana] Length = 422 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 105/355 (29%), Positives = 184/355 (51%), Gaps = 16/355 (4%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 + + ++ + L+ K DP + N E + L + LD ++ + +D Sbjct: 57 LIRKM---ESVEKTWKELSVKLADPDVVSNQSEYQKLAQSMSELDEVVTVFRRFKDCEKQ 113 Query: 69 NLILLELALEEDDCSILQETS-----DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L LA E D + E + I+ + + L S D+ + LEV A Sbjct: 114 LLESKVLAKEAGDDEDMAEMIGSEINSLTKEIEELEKQLKVLLLPSDPLDARNILLEVRA 173 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G GG E+ W L+RMY R++E+ +K + + E G K+ + IKG Y LK Sbjct: 174 GTGGDEAAIWTGDLVRMYQRYSERSSWKFSMVSCSEAEHGGYKTCVMEIKGNRVYSKLKY 233 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHR+ R+ ++ R HTS +++ + P D +E+ I D + + R+ GAGGQ+V Sbjct: 234 ESGVHRVQRVPQTETQGRVHTSTATVAIMP-EADEVEVVIDPKDIELTSARSGGAGGQNV 292 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N ++A+ + H P+G+ + C +ER+Q +NKA+A+ +LRAKLYE+++++++E I K Sbjct: 293 NKVETAIDLFHKPSGIRIFCTEERTQIRNKARAFQLLRAKLYEIKVREQQE--KIRNERK 350 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +++G G +IR+Y + V D R + + + LDG L+D ++A A+++ Sbjct: 351 SQVGTGARSEKIRTYNYKD-SRVTDHRLKM-NFALTTFLDGALEDAVQACAALEQ 403 >gi|300781422|ref|ZP_07091276.1| peptide chain release factor RF1 [Corynebacterium genitalium ATCC 33030] gi|300533129|gb|EFK54190.1| peptide chain release factor RF1 [Corynebacterium genitalium ATCC 33030] Length = 360 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 115/346 (33%), Positives = 180/346 (52%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ V + + DP + + + L + L I+ E+ D E+ Sbjct: 10 VDDYVSEYQGIQAQMGDPDVVGDQDLFRKLSKRYAQLQPIINVNNELTQAREDLEAAQEM 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A E+ + + + E E D++D +E+ AGAGG E+ +A Sbjct: 70 AAEDKEFAEEATRLEGEIVRLEEELADLL--APRDEHDADDVIMEIKAGAGGEEAALFAG 127 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190 L RMY ++AEK + L++ + + G+K T+ +K A+ LK E GVHR+ Sbjct: 128 DLARMYQKYAEKAGLSWDVLDLSESDLGGVKDMTVAVKAKNPSRDGAWSMLKFEGGVHRV 187 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 RI +S R TS + + VYP ++ ++I E D R+D YR+SG GGQ VNTTDSAV Sbjct: 188 QRIPVTESQGRIQTSAAGVLVYPEPEEVEAVDIDEKDLRVDVYRSSGKGGQGVNTTDSAV 247 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG+VV CQ+ERSQ +N+A+A +L+A+L +LE +K E A G +S+ + Sbjct: 248 RITHLPTGIVVTCQKERSQIQNRARAMQVLQARLDQLEREKAEAEAAEGRASQVRTMDRS 307 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N + + VLDG++DD + A ++ Sbjct: 308 ERIRTYNW-PENRISDHRINYKSNNLDAVLDGNMDDIITALQTHER 352 >gi|300933612|ref|ZP_07148868.1| peptide chain release factor 1 [Corynebacterium resistens DSM 45100] Length = 353 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 115/346 (33%), Positives = 178/346 (51%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ + L + DP L + A+ + + L I ++++ D+ E+ Sbjct: 2 VDDILAEYQGLEAQLGDPELHNDPAAARKVGKRFSELQPIIQTHQQLEQAREDHEAAAEM 61 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A E+ + + + + E D +D +E+ +GAGG E+ +A Sbjct: 62 ASEDAEFAEEAKRLETEIAELEEKLTDLL--APRDPHDGDDIVMEIKSGAGGEEAALFAG 119 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-----YGWLKGEQGVHRL 190 L RMY R+AE+ F TE L++++ + G+K T+ I+ + K E GVHR+ Sbjct: 120 ELARMYQRYAERHGFATEVLDLNETDLGGVKDMTMSIRSKQPSRDGAWAEFKFEGGVHRV 179 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 RI +S R TS + + VYP D+ +++I E D RID YR+SG GGQ VNTTDSAV Sbjct: 180 QRIPVTESQGRIQTSAAGVLVYPEPDEVEDVQIDEKDLRIDVYRSSGKGGQGVNTTDSAV 239 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTGVVV CQ+ERSQ +NKA+A +L A+L ++E +K E A G +++ + Sbjct: 240 RITHLPTGVVVTCQKERSQIQNKARAMQVLAARLQQMEEEKAEAEAAEGRAAQIRTMDRS 299 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + + VL GDL+ A + Sbjct: 300 ERIRTYNF-PESRVSDHRIGYKANNLDAVLGGDLESLFAALKDADR 344 >gi|256825643|ref|YP_003149603.1| peptide chain release factor 1 [Kytococcus sedentarius DSM 20547] gi|256689036|gb|ACV06838.1| bacterial peptide chain release factor 1 (bRF-1) [Kytococcus sedentarius DSM 20547] Length = 357 Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats. Identities = 113/345 (32%), Positives = 165/345 (47%), Gaps = 11/345 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 A+ + L + P + + + R L+ + D EL Sbjct: 5 LGEALAEHARLEAEMARPEVVGDPARFRAAARGYAALEPVARAAARREAAEQDLAAAREL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A EE D + E + D D LEV AG GG ES +A+ Sbjct: 65 AAEEPDFAAELPALVEELEAAQEALTRALVP--RDPDDDRDVILEVKAGEGGQESALFAH 122 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVH 188 L+RMY R AE+R + LE + G+K A + I G + LK E GVH Sbjct: 123 ELVRMYLRHAERRGWAATVLESTASDLGGVKDARVAIRARGAGEPGDAPWARLKFEGGVH 182 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS + V P VDD E+EI+ +D ++D YR+SG GGQ VNTTDS Sbjct: 183 RVQRVPVTESQGRIHTSAVGVLVLPEVDDPGEVEIAPADLKVDVYRSSGPGGQSVNTTDS 242 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307 AVR+TH+PTGVVV CQ E+SQ +NK A +L ++L + L++ + + ++ + Sbjct: 243 AVRLTHLPTGVVVTCQNEKSQLQNKEAALRVLASRLRRMALEEAQAEVSQARRAQVRTVD 302 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 ++R+Y P V D RT + + VLDGDLD + + +A Sbjct: 303 RSERVRTYNF-PESRVSDHRTGYKAHNLPAVLDGDLDAVIDSLVA 346 >gi|257058120|ref|YP_003136008.1| peptide chain release factor 1 [Cyanothece sp. PCC 8802] gi|256588286|gb|ACU99172.1| peptide chain release factor 1 [Cyanothece sp. PCC 8802] Length = 370 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 98/348 (28%), Positives = 177/348 (50%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + Q L + DP + N E + + R R L+ + + + + ++ Sbjct: 10 LQSVDQTYQELTHRLADPDIATNPDELQRVARLRSSLEETVLTYDSWKQTQEELIGAKQI 69 Query: 76 ALEEDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + ++E + ++++ + + L D + LE+ AG GG E+ Sbjct: 70 LKDAGGDPEMREMAALEVEELAEKLEELEKKLKILLLPRDPNDDKNIMLEIRAGTGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L+RMY+R+AE +K+ + + + G K A L I+G Y LK E GVHR+ Sbjct: 130 SIWAGDLVRMYSRYAESQKWTVKLVSESLADMGGFKEAILEIQGDRVYSKLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ + P D +E++I D I T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPVTEAGGRVHTSTATVAIMP-EVDDVEVQIDAKDIEITTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + + P G+ + C +ERSQ +N+ +A +LRAKLYEL+L RE+ + K+++G G Sbjct: 249 DLFYKPLGIRIFCTEERSQLQNRERAMQILRAKLYELKL--REQQDAVSSMRKSQVGTGA 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D R + S + L+GD+++ +++ ++ + Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLG-QNFSLAGTLEGDIEEIIQSCISQDQ 352 >gi|317008750|gb|ADU79330.1| peptide chain release factor 1 [Helicobacter pylori India7] Length = 352 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 104/345 (30%), Positives = 178/345 (51%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R L + ++ + L +E+ ++ KE L + EL Sbjct: 8 LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISVASKEYLSVLENIKENKEL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ + +E L+ K ++E + + D + YLE+ AG GG E+ + Sbjct: 68 LEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L + Y R+A+ +K+K E + + G K LIKG Y LK E G HR+ R+ Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PT + V Q E+SQHKNK +A +L+A+LYE ++++++ + K ++G G + Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + + R N+ S +++ G+LD+ + +A + Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348 >gi|218245097|ref|YP_002370468.1| peptide chain release factor 1 [Cyanothece sp. PCC 8801] gi|226739099|sp|B7K205|RF1_CYAP8 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|218165575|gb|ACK64312.1| peptide chain release factor 1 [Cyanothece sp. PCC 8801] Length = 370 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 97/348 (27%), Positives = 177/348 (50%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + Q L + DP + N E + + R R L+ + + + + ++ Sbjct: 10 LQSVDQTYQELTHRLADPDIATNPDELQRVARLRSSLEETVLTYDSWKQTQEELIGAKQI 69 Query: 76 ALEEDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + ++E + ++++ + + L D + LE+ AG GG E+ Sbjct: 70 LKDAGGDPEMREMAALEVEELAEKLEELEKKLKILLLPRDPNDDKNIMLEIRAGTGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L+RMY+R+AE +K+ + + + G K A L I+G Y LK E GVHR+ Sbjct: 130 SIWAGDLVRMYSRYAESQKWTVKLVSESLADMGGFKEAILEIQGDRVYSKLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ + P D +E++I D I T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPVTEAGGRVHTSTATVAIMP-EVDDVEVQIDAKDIEITTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + + P G+ + C +ERSQ +N+ +A +LRAKLY+L+L RE+ + K+++G G Sbjct: 249 DLFYKPLGIRIFCTEERSQLQNRERAMQILRAKLYDLKL--REQQDAVSSMRKSQVGTGA 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D R + S + L+GD+++ +++ ++ + Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLG-QNFSLAGTLEGDIEEIIQSCISQDQ 352 >gi|121608524|ref|YP_996331.1| peptide chain release factor 1 [Verminephrobacter eiseniae EF01-2] gi|166223615|sp|A1WI56|RF1_VEREI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|121553164|gb|ABM57313.1| bacterial peptide chain release factor 1 (bRF-1) [Verminephrobacter eiseniae EF01-2] Length = 359 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 115/335 (34%), Positives = 174/335 (51%), Gaps = 9/335 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 QRL L+ P + ++++ + + RE + R D EL L + Sbjct: 14 QRLGELDFLLARPDIMADMVQYRSIAREHAEVTQVAGRYARYLQREADLGAAREL-LADP 72 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTESQDWANMLL 138 + L + + + +L + + LL + +A++E+ AG GG ES +A L Sbjct: 73 GMAELAQEEIDSSQTELRQLEDELQRLLLPKEPDDARNAFVEIRAGTGGDESALFAGDLT 132 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTR+A +R ++ + L + E G K L I G YG LK E G HR+ R+ ++ Sbjct: 133 RMYTRYAARRGWQVQVLSENPAELGGYKEIVLRIDGEQVYGTLKFESGGHRVQRVPATET 192 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R HTS ++ V P D + I ++ ++ RIDT+RASGAGGQH+N TDSAVR+ H+PTG Sbjct: 193 QGRVHTSACTVAVMPEPDPARAIALNPAELRIDTFRASGAGGQHINKTDSAVRVVHLPTG 252 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSY 315 +V +CQ RSQH NKA+A +L+A+L E E +R A K IG G +IR+Y Sbjct: 253 IVAECQDGRSQHGNKARALQVLQARLQEKERSER--AAKEAALRKGLIGSGERSDRIRTY 310 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 P + D R + +LDG+LD ++A Sbjct: 311 NF-PQGRLTDHRIQLTLYQLQQLLDGELDPMLQAL 344 >gi|209883257|ref|YP_002287114.1| peptide chain release factor 1 [Oligotropha carboxidovorans OM5] gi|229470351|sp|B6JA06|RF1_OLICO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|209871453|gb|ACI91249.1| peptide chain release factor 1 [Oligotropha carboxidovorans OM5] Length = 358 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 107/349 (30%), Positives = 174/349 (49%), Gaps = 16/349 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72 D + R + L + N RE L + +K + L D + Sbjct: 7 LDILLARHAALEAELLGQ---LNAEAYVRATRELAELTPVVDAVKAYRAGASELSDLDAM 63 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTES 130 ++ + + + E+ + + + E +Q L + + LEV AG GG E+ Sbjct: 64 IDDPTTDAEMRAMAESERPVLQERQENLEQQIRIALLPKDAMDERNVVLEVRAGTGGDEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A + +K E + +G G K ++G A+ LK E GVHR+ Sbjct: 124 SLFAGDLFRMYERFAALQGWKVEVISASEGTVGGYKEIVAQVQGRGAFAKLKFESGVHRV 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +++ R HTS +++ V P + I+I+I ++D RI+T RA GAGGQHVN T+SA+ Sbjct: 184 QRVPDTEASGRIHTSAATVAVLP-EAEEIDIDIKDTDLRIETMRAQGAGGQHVNKTESAI 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG+VV Q RSQHKN+A A N+LR+++ + E Q+ + + ++G G Sbjct: 243 RITHIPTGIVVMMQDSRSQHKNRASAMNILRSRILDAERQR--AASERSADRRGQVGSGD 300 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 ++R+Y P V D R N+ V+ G+ L++ + A + Sbjct: 301 RSERVRTYNF-PQGRVTDHRINLTLYKLPQVIAGEALNELIDALTTEHQ 348 >gi|256372571|ref|YP_003110395.1| peptide chain release factor 1 [Acidimicrobium ferrooxidans DSM 10331] gi|256009155|gb|ACU54722.1| peptide chain release factor 1 [Acidimicrobium ferrooxidans DSM 10331] Length = 357 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 112/346 (32%), Positives = 175/346 (50%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72 ++ + + + DP ++Q+ A+ + R + L+ + ++ +Q D L Sbjct: 6 YERFEHEYARVLEELADPAIFQDQRRAREVARRHKELEAIVGALRRVQALEGDRDAAREL 65 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 A + + E + + E + L S D LE+ GG E+ Sbjct: 66 YRGASPAEREELKAELDEIDAALARAREALELLLLPSDPNDGRAVILEIRGAEGGEEANL 125 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L MY RWA++R +K E L + G TLL++G +A+ LK E G HR+ R Sbjct: 126 FAKDLADMYERWADRRSWKVEVLSRSVSDLGGYDDVTLLVRGDDAWKRLKHEAGPHRVQR 185 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ P D IE+ I SD RID YR++G GGQ VNTTDSAVRI Sbjct: 186 VPVTETQGRVHTSSATVTALP-EADEIEVSIDPSDLRIDVYRSTGPGGQSVNTTDSAVRI 244 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309 TH+PTG+VV Q E+SQ +N+A+A +LRA+L +LE KR+ + + K +I G Sbjct: 245 THLPTGIVVAMQDEKSQIQNRAKALQVLRARLLKLEQDKRQAE--LTATRKAQIRSGGRS 302 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D R + +L GDLD+ A L ++ Sbjct: 303 EKIRTYNFK-ENRVTDHRIGLTLYRLDQILQGDLDELSDALLVHER 347 >gi|225552361|ref|ZP_03773301.1| peptide chain release factor 1 [Borrelia sp. SV1] gi|225371359|gb|EEH00789.1| peptide chain release factor 1 [Borrelia sp. SV1] Length = 357 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 123/347 (35%), Positives = 191/347 (55%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++A ++ + K +D +L ++ + +++E +L+ + E + L + Sbjct: 6 LNSATSKIKLIEEKLQDINLIKDQKKYSKIVKEYTYLEKINTKKIEYEKILSQINDTKTI 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 +ED + + L + + E + L E DS + +E+ AG GG E+ Sbjct: 66 LEKEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGTGGEEAA 125 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +AN L MY +++EK+K+KTE + ++ E G K IKG + + LK E GVHR+ Sbjct: 126 LFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRVQ 185 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +SN R TS +++ V P ++++ I+E D RID YR+SGAGGQHVNTTDSAVR Sbjct: 186 RIPITESNGRLQTSAATVAVLPNIEETEID-INEKDLRIDVYRSSGAGGQHVNTTDSAVR 244 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VVQCQ ERSQHKNK QA +LRA+LYE E K++E + K ++G G Sbjct: 245 ITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R NI + + G+LD + + + Sbjct: 303 SERIRTYNF-PQNRITDHRANITLYKLEEFIQGELDPLLDPLMIALQ 348 >gi|193216649|ref|YP_001999891.1| peptide chain release factor 1 [Mycoplasma arthritidis 158L3-1] gi|226739117|sp|B3PMD5|RF1_MYCA5 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|193001972|gb|ACF07187.1| peptide chain release factor 1 [Mycoplasma arthritidis 158L3-1] Length = 355 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 99/342 (28%), Positives = 173/342 (50%), Gaps = 6/342 (1%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLE 74 + ++ L + ++ ++ + + +E +++ + + +L+ Sbjct: 7 SIKEKYELLAQELTKLEIFNDIKKYTKIQKEHASIEDIAIAFINYLAAESSYNLSKEILQ 66 Query: 75 LALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 +E+ ++ +E D ++ + + L E D+ + +E+ AGG E + Sbjct: 67 NEKDEELIALAKEDIDEQSTLMQKLEQELKELLLPQDENDNKNVIMEIRGAAGGDEGDIF 126 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 + L +MY ++ E FK + ++ G G ++KG + LK E+GVHR+ R+ Sbjct: 127 SGDLFKMYQKFCEANDFKIKIVDSVYGTAGGYSRIVFIVKGEKVFSKLKFERGVHRVQRV 186 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 ++ R HTS +++ V P VDD ++IEI D +D +R+SGAGGQ VNTTDSAVRIT Sbjct: 187 PQTETQGRVHTSTATVTVLPEVDDDVKIEIRPEDIEVDVFRSSGAGGQSVNTTDSAVRIT 246 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 H TG++V Q ERSQ N+ A +L+AKLYE+E++KREE +IR Sbjct: 247 HKKTGIIVTSQDERSQIMNRETALKILKAKLYEIEVKKREEEEQGLRKLAGTGDRSEKIR 306 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +Y P + D R + +V++G+LD + A +A +K Sbjct: 307 TYNY-PQDRITDHRIGFSLS-LKNVMEGNLDKIIDALIADEK 346 >gi|297821206|ref|XP_002878486.1| hypothetical protein ARALYDRAFT_907869 [Arabidopsis lyrata subsp. lyrata] gi|297324324|gb|EFH54745.1| hypothetical protein ARALYDRAFT_907869 [Arabidopsis lyrata subsp. lyrata] Length = 417 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 105/355 (29%), Positives = 193/355 (54%), Gaps = 16/355 (4%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DR 65 + + ++ + L+ K DP + N E + L + LD ++ + + + Sbjct: 57 LIRKM---ESVEKTWKELSVKLADPAVVSNQSEYQKLAQSMSELDEVVTVFRRFKDCEKQ 113 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD--SNDAYLEVHA 123 L ++ +L + A +++D + + + N I++E KQ + LL + + LEV A Sbjct: 114 LLESKVLAKEAGDDEDMAEMIGSEINSLSIEIEGLEKQLKVLLLPSDPLDARNILLEVRA 173 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G GG E+ W L+RMY R++E+ +K + + E G K+ + IKG Y LK Sbjct: 174 GTGGDEAAIWTGDLVRMYQRYSERSSWKFSMVSCSEAEHGGYKTCVMEIKGNRVYSKLKY 233 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHR+ R+ ++ R HTS +++ + P D +E+ I D + + R+ GAGGQ+V Sbjct: 234 ESGVHRVQRVPQTETQGRVHTSTATVAIMP-EADEVEVVIDPKDIELTSARSGGAGGQNV 292 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N ++A+ + H P+G+ + C +ER+Q +NKA+A+ +LRAKLYE+++++++E I K Sbjct: 293 NKVETAIDLFHKPSGIRIFCTEERTQIRNKARAFQLLRAKLYEIKVREQQE--KIRNERK 350 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +++G G +IR+Y + V D R + + + LDG L+D ++A A+++ Sbjct: 351 SQVGTGARSEKIRTYNYKD-SRVTDHRLKM-NFALTSFLDGALEDAVQACAALEQ 403 >gi|229819782|ref|YP_002881308.1| peptide chain release factor 1 [Beutenbergia cavernae DSM 12333] gi|229565695|gb|ACQ79546.1| peptide chain release factor 1 [Beutenbergia cavernae DSM 12333] Length = 373 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 112/346 (32%), Positives = 166/346 (47%), Gaps = 11/346 (3%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 + + + DP + + A+ L R L + + + D ELA Sbjct: 18 EPMLAEHREIEAALADPAVHADAGRARALGRRYAELGRVVGAYRAWRRAADDATAAAELA 77 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 +E+D + + E + + D D LE+ AG GG ES +A Sbjct: 78 VEDDAFASEVPALQVAEADAAEHLRRVL--VPRDPDDGRDVILEIKAGEGGEESALFAGD 135 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHR 189 LLRMY R+AE+R ++T+ LE + + G K + + + LK E GVHR Sbjct: 136 LLRMYLRFAERRGWQTQVLEATESDLGGYKDVQVAVKSRGAAAPEDGVWAALKYEGGVHR 195 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS + + V P VDD E+EI D RID +R+SG GGQ VNTTDSA Sbjct: 196 VQRVPVTESQGRIHTSAAGVLVLPEVDDPGEVEIEGGDLRIDVFRSSGPGGQSVNTTDSA 255 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308 VRITH+PTG+VV Q E+SQ +N+ QA +LRA+L + + A S+ + Sbjct: 256 VRITHLPTGIVVSMQNEKSQLQNREQAMRVLRARLLAAQQEAAAAEAAEARRSQVRTVDR 315 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RT + + VL GDLD + + + Sbjct: 316 SERIRTYNF-PENRIADHRTGYKAYNLDAVLAGDLDAVVASAVEAD 360 >gi|187251505|ref|YP_001875987.1| peptide chain release factor 1 [Elusimicrobium minutum Pei191] gi|186971665|gb|ACC98650.1| Peptide chain release factor [Elusimicrobium minutum Pei191] Length = 358 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 105/348 (30%), Positives = 184/348 (52%), Gaps = 13/348 (3%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D ++ L + ++ E + + L + E++ Sbjct: 7 MDISKYLEEFKTLEAEMSSGNMPS--EELQKKSKRHAFLRPIVEKGLELEAAQKGIKDAQ 64 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTE 129 E+ + D + Q ++ ++ + ++ + E DS YLE+ GAGG E Sbjct: 65 EIIKDGSDKEMSQMAAEEMETLNAQIPVLEAELRVLVIPPDPNDSKSIYLELRPGAGGDE 124 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 S +A +LR+Y R+A+ + +KTE LE G K A++ IKG AY WL+ E G HR Sbjct: 125 SSIFAAEMLRVYQRFADAKGWKTELLEYTPTGLKGCKYASMFIKGDGAYSWLRDESGTHR 184 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +++ R HTS ++ + P + ++I+I+ +D ++T RA GAGGQ+VN ++A Sbjct: 185 VQRVPDTETSGRVHTSTITVAIMP-EAEEVDIQINPADIEMETCRAGGAGGQNVNKVETA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR+ H PTGVVV C++ERSQ N+ +A NMLRAKLY++E +KR + I ++ K+++G G Sbjct: 244 VRLIHKPTGVVVSCREERSQGANRIKAMNMLRAKLYQMEEEKRNKE--IYDTRKSQVGTG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P V D RT + +++++G +++ + ++ Sbjct: 302 DRSEKIRTYNF-PQSRVTDHRTEKSYHNITEIMEGQIEEILNDLRTLR 348 >gi|88608013|ref|YP_506293.1| peptide chain release factor 1 [Neorickettsia sennetsu str. Miyayama] gi|119361566|sp|Q2GE03|RF1_NEOSM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|88600182|gb|ABD45650.1| peptide chain release factor 1 [Neorickettsia sennetsu str. Miyayama] Length = 367 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 117/355 (32%), Positives = 186/355 (52%), Gaps = 16/355 (4%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 ++ L G+ + + R ++L + P + L +E L + I + Sbjct: 1 MDNLWGV--LEEILNRHTYLADRLRCPEAIASQE-FSKLSKEYAELKPKVELIARYKKLK 57 Query: 67 CDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEV 121 + L L +D I + +LQ I+ + + E + D+ + LEV Sbjct: 58 EEQAYLELLVKNPLEDQEIREIGKSDLQAIQDVIPKLELEIKRMLLPKDKDDALNVMLEV 117 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG GG E+ +A L MY ++AE+ K++ E + I E G K A I G + + L Sbjct: 118 RAGTGGDEAALFAASLFHMYQKYAERMKWRFEIISISHNEIGGYKEANASISGSDVFAKL 177 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHR+ R+ +S R HTS +++ V P + ++++I++ D RID YR+SG GGQ Sbjct: 178 KFESGVHRVQRVPETESAGRIHTSTATVAVLP-EPEDVDVKINDKDLRIDVYRSSGPGGQ 236 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTTDSAVRITHIPTG+VV Q E+SQHKN+A+A +LR +LYE+E K ++ I Sbjct: 237 SVNTTDSAVRITHIPTGIVVIQQDEKSQHKNRAKAMKVLRVRLYEIERNKVQQE--ISSM 294 Query: 302 SKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSD-VLDGDLDDFMKATLA 352 K++IG G + R+Y P + D R N+ ++ V +G+L+ ++A + Sbjct: 295 RKSQIGSGERSEKTRTYNF-PQGRITDHRINLTTYRINETVKEGELEPIIEALIR 348 >gi|238060791|ref|ZP_04605500.1| peptide chain release factor 1 [Micromonospora sp. ATCC 39149] gi|237882602|gb|EEP71430.1| peptide chain release factor 1 [Micromonospora sp. ATCC 39149] Length = 362 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 109/341 (31%), Positives = 167/341 (48%), Gaps = 16/341 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L + DP + + A+ + R L E++ D EL Sbjct: 6 LAALLDEYAELEKRLADPAIHADQNAARRVGRRYAELSPLHKAAAELEQARADLAAAREL 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A E+ + E+ E + + D+ D +E+ AG GG ES +A Sbjct: 66 AAEDPSFAAETESIAAGLPALEERLAELL--IPRDPHDAKDVIVEIKAGEGGEESALFAG 123 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVH 188 LLRMYTR+AE+R + TE ++ D + G+K +L IK + LK E GVH Sbjct: 124 DLLRMYTRYAERRGWLTEVIDAQDSDLGGVKDVSLAIKTKGVPEGGNGVWSRLKWEGGVH 183 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS + + V P + +++ + +D RID +R+SG GGQ VNTTDS Sbjct: 184 RVQRVPVTESQGRIHTSAAGVLVLP-EAEDVDVSVDPNDLRIDVFRSSGPGGQSVNTTDS 242 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE--- 305 AVRITH+PTG+VV CQ E+SQ +N+ QA +LRA+L L + + A ++ K + Sbjct: 243 AVRITHVPTGIVVSCQNEKSQLQNREQAMRILRARL--LAAAQEQADAAASDARKAQVRT 300 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 + +IR+Y P + D R + L G+LD Sbjct: 301 VDRSERIRTYNF-PQNRITDHRIGYTAYNLDLALAGELDGV 340 >gi|320449740|ref|YP_004201836.1| peptide chain release factor 2, programmed [Thermus scotoductus SA-01] gi|320149909|gb|ADW21287.1| peptide chain release factor 2, programmed [Thermus scotoductus SA-01] Length = 307 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 138/299 (46%), Positives = 185/299 (61%), Gaps = 5/299 (1%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + + ++ L L L + E+ ++ L ++E E+LLS Sbjct: 1 MDTFRSLESDLEGLLELWQEFPAEEREALRP----ELLEAAKKLESLYHETLLSFPHAEK 56 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 +A L + GAGGTE+ DWA MLLRMYTR+AE++ F+ E +++ G EAGI A ++++G Sbjct: 57 NAILTIQPGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDVTPGAEAGIDYAQIIVRGE 116 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 NAYG L E GVHRLVR SP+D++ RRHTSF+ + V P VDD++E+ I D RID +R+ Sbjct: 117 NAYGLLAPEAGVHRLVRPSPFDASGRRHTSFAGVEVMPEVDDTVEVVIRPEDLRIDVFRS 176 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 G GGQ VNTTDSAVRI H+PTG+ V CQ RSQ KNK A +LR++LYELE +K++E Sbjct: 177 QGHGGQGVNTTDSAVRIVHLPTGITVTCQTTRSQIKNKELAMKVLRSRLYELEWKKKQEE 236 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 I WG QIRSYVL VKD RT + + P +VLDGDL DF+ A L K Sbjct: 237 LRKLRGEVRPIEWGSQIRSYVLDKQ-YVKDHRTGLMRFDPQNVLDGDLLDFIWAGLEWK 294 >gi|295105808|emb|CBL03351.1| bacterial peptide chain release factor 1 (bRF-1) [Gordonibacter pamelaeae 7-10-1-b] Length = 357 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 118/346 (34%), Positives = 174/346 (50%), Gaps = 12/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +Q L + DP + + E L +E +E D E+ Sbjct: 10 LEKIIQAYEDLQGRMGDPAVLADQKEYNRLAKEYASQGPLAKKAREYVQASDDLAAAKEM 69 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D QE ++ E +F + + AD D +E+ A AGG E+ +A Sbjct: 70 MADPDMREFAQEEIAGIEAKLPALEEDIKFMLIPADPADDKDIIVEIRAAAGGDEAAIFA 129 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L +MY R+A + +KTE +++ E G K +KG + Y +K E GVHR+ R+ Sbjct: 130 GDLYKMYERFAGAQGWKTETMDVSASEAGGFKEIQFKVKGDHVYSVMKFESGVHRVQRVP 189 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P D +E++I+E+D RID YRA G GGQ VNTTDSAVRITH Sbjct: 190 KTESQGRIHTSTATVAVLP-EADEVEVDINENDLRIDVYRAGGPGGQCVNTTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +P+G+VVQ Q ++SQ +NK A +LRA+LYE L +++ A G +IG G + Sbjct: 249 LPSGLVVQSQDQKSQLQNKIAAMAVLRARLYEKMLAEQQ--AAEGAERLAQIGSGDRSEK 306 Query: 312 IRSYVLQPYQMVKDLRTNIE-KTSPSDVLDGD-LDDFMKATLAIKK 355 IR+Y P V D R + VL GD L D + A A + Sbjct: 307 IRTYN-GPQDRVTDHRIGYNGTYN--GVLLGDGLGDVITALQAADR 349 >gi|238650227|ref|YP_002916078.1| peptide chain release factor 1 [Rickettsia peacockii str. Rustic] gi|259585243|sp|C4K0C9|RF1_RICPU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|238624325|gb|ACR47031.1| peptide chain release factor 1 [Rickettsia peacockii str. Rustic] Length = 355 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 122/347 (35%), Positives = 184/347 (53%), Gaps = 16/347 (4%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + + + L + + E +E L++ ++ IKE + Sbjct: 6 NLAKILDKYENLGNTLSS-GIMGD--EFVKASKEYAELEDVVAKIKEYNKAKSELEEANN 62 Query: 75 LALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 LE + E ++ + L +ADS A +EV AG+GG E Sbjct: 63 FKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGGEE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A +L MY R+AE + ++ E L I D G K A+ IKG + + LK E GVHR Sbjct: 123 AALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS +++ V P + ++I+I + D RIDTYRASGAGGQHVNTTDSA Sbjct: 183 VQRVPETESQGRIHTSAATVAVLP-EAEEVDIKIEDKDLRIDTYRASGAGGQHVNTTDSA 241 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG+ V Q E+SQHKNKA+A +LRA++YE E + ++ +S + ++G G Sbjct: 242 VRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERR--KKEQERADSRRGQVGSG 299 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352 +IR+Y P V D R N+ +V+ +G LD+F++A +A Sbjct: 300 DRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345 >gi|78185551|ref|YP_377985.1| peptide chain release factor 1 [Synechococcus sp. CC9902] gi|119361629|sp|Q3AW64|RF1_SYNS9 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|78169845|gb|ABB26942.1| bacterial peptide chain release factor 1 (bRF-1) [Synechococcus sp. CC9902] Length = 365 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 98/348 (28%), Positives = 165/348 (47%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLIL 72 A L + DP + + + + RER L+ + +++++ D L Sbjct: 10 LQTATASFRSLERQLADPDVANDPKRLETIARERSRLEPLVLDFEALQKLEQEQADAREL 69 Query: 73 LELALEEDDCSILQETS--DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L + + L + + + ++ L D LE+ AGAGG E+ Sbjct: 70 LRESRSDAAMQELAQDELSELEAQHTALLQRLTLALLPRDPRDDRSVMLEIRAGAGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY R+ +K + + L + + G + + +KG + + LK E GVHR+ Sbjct: 130 CIWAGDLARMYERYGQKLGWSVQQLSCTEADLGGYRELIVSVKGTSVFSQLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P D++E+E+ D I T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADAVEVELDPKDLEISTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ V C Q+RSQ +N+ +A +LRAKL LE + ++++G G Sbjct: 249 DLLHKPTGIRVFCTQQRSQLQNRERALEILRAKL--LERELAAAAERESSHRRSQVGSGD 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + D R + VL G L+D + A +A ++ Sbjct: 307 RSEKIRTYNYKD-NRTTDHRLGRNFS-LEPVLQGQLEDLIGACIAEEQ 352 >gi|317179883|dbj|BAJ57669.1| peptide chain release factor 1 [Helicobacter pylori F32] Length = 352 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 103/345 (29%), Positives = 175/345 (50%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R L + ++ + L +E+ ++ KE L + EL Sbjct: 8 LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLENIKENKEL 67 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ + +E L+ K + + D + YLE+ AG GG E+ + Sbjct: 68 LEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L + Y R+A+ +K+K E + + G K LIKG Y LK E G HR+ R+ Sbjct: 128 GDLFKAYCRYADLKKWKVEVVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PT + V Q E+SQHKNK +A +L+A+LYE ++++++ + K ++G G + Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + + R N+ S +++ G+LD+ + +A + Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348 >gi|25453244|sp|P59102|RF2_BUCAP RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 364 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 158/352 (44%), Positives = 239/352 (67%), Gaps = 1/352 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL ++ L D+ R+ ++ + +W+ L +E+ L+ I+ I Sbjct: 12 KLIQRKKDLKRYLDYVAKSTRILEIDLELSSTEIWKKKEYVHNLNKEKNLLNIIINKINN 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ + + +I L+LA+E D +I+QE S+ +++I +++ +F + S + D + Y++V Sbjct: 72 IEKNIKEMIIFLDLAIETKDNAIIQEISEEIKKIAEKIQELEFYRMFSNQHDHCNCYIDV 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG+GG ++QDW+ +LLRMY +W++K+ FKTE +E GE GIKS+T+ + G A+GWL Sbjct: 132 QAGSGGVDAQDWSKILLRMYLKWSDKKGFKTEIIEESTGEIVGIKSSTIKVSGQYAFGWL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E G+HRL+R SP+DS RRHTSFSSI++YP ++D I IEI+ SD RID YRASGAGGQ Sbjct: 192 RTETGIHRLIRKSPFDSGKRRHTSFSSIFIYPDIEDKINIEINPSDLRIDVYRASGAGGQ 251 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVN T+SAVRITH+PT +V QCQ RSQHKNK QA +++KLYE+++++++E E Sbjct: 252 HVNRTESAVRITHLPTNIVTQCQNNRSQHKNKEQAIKQMKSKLYEMKIKEKKEKQKKIEK 311 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +K++I WG QIRSY+L +KDLRT +EK + VLDGDLDDF++ +L + Sbjct: 312 NKSDISWGNQIRSYILD-NSKIKDLRTGVEKYNVQSVLDGDLDDFIEQSLIM 362 >gi|207091639|ref|ZP_03239426.1| peptide chain release factor 1 [Helicobacter pylori HPKX_438_AG0C1] Length = 352 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 104/345 (30%), Positives = 178/345 (51%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R L + ++ + L +E+ ++ KE L + EL Sbjct: 8 LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLENIKENKEL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ + +E L+ K ++E + + D + YLE+ AG GG E+ + Sbjct: 68 LEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L + Y R+A+ +K+K E + + G K LIKG Y LK E G HR+ R+ Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PT + V Q E+SQHKNK +A +L+A+LYE ++++++ + K ++G G + Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + + R N+ S +++ G+LD+ + +A + Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348 >gi|109948016|ref|YP_665244.1| peptide chain release factor 1 [Helicobacter acinonychis str. Sheeba] gi|122973223|sp|Q17VT1|RF1_HELAH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|109715237|emb|CAK00245.1| peptide chain release factor RF-1 [Helicobacter acinonychis str. Sheeba] Length = 352 Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats. Identities = 104/345 (30%), Positives = 175/345 (50%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R L + ++ + L +E+ ++ KE L + EL Sbjct: 8 LSSILKRYDELTALLSSAEVINDIKKLTELSKEQSSIEEISVASKEYLSVLENIKENKEL 67 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ + +E L+ K + + D + YLE+ AG GG E+ + Sbjct: 68 LEDKELSELAKEELKILEIKKSELETTIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L + Y R+A+ +K+K E + + G K LIKG Y LK E G HR+ R+ Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P D +EI I+ SD +I+ +RA G GGQ VNTTDSAVRITH Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEISINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PT + V Q E+SQHKNK +A +L+A+LYE ++++++ + K ++G G + Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + + R N+ S +++ G+LD+ + +A + Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348 >gi|209965909|ref|YP_002298824.1| peptide chain release factor 1 PrfA [Rhodospirillum centenum SW] gi|209959375|gb|ACJ00012.1| peptide chain release factor 1 PrfA [Rhodospirillum centenum SW] Length = 360 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 119/340 (35%), Positives = 177/340 (52%), Gaps = 13/340 (3%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 R L + L +E L+ + I E++ D L +A +D Sbjct: 18 RYDELRDQLASGTLSG--EVFVRSSQEYAELEPVATAIAELRRARADMADLQAMAEGDDA 75 Query: 82 CSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 + ++ + L EAD +A LEV AG GG E+ +A L Sbjct: 76 EMATLARDELVEADRRIPELERRIMLALLPKDEADEKNAILEVRAGTGGDEAALFAAELF 135 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 MY R+A + ++ E +E+++ G K A+ I G N + LK E GVHR+ R+ ++ Sbjct: 136 EMYRRYAGIQGWRFETIEVNETGLGGYKEASASITGRNVFRRLKFESGVHRVQRVPETEA 195 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R HTS +++ V P + ++I I E D RID +R+ G+GGQ VNTTDSAVRITH+PT Sbjct: 196 GGRIHTSAATVAVLP-EAEEVDIHIEEKDLRIDVFRSQGSGGQSVNTTDSAVRITHLPTN 254 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315 +VVQCQ E+SQHKNKA+A +LRA+LYE+E Q+R+ S +T++G G +IR+Y Sbjct: 255 IVVQCQDEKSQHKNKAKALKVLRARLYEIERQRRDSER--AASRRTQVGSGDRSERIRTY 312 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354 P V D R N+ V+ G+ LD+ + A +A Sbjct: 313 NF-PQGRVTDHRINLTLYKIDKVMAGEALDELVDALVASD 351 >gi|124024025|ref|YP_001018332.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT 9303] gi|123964311|gb|ABM79067.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT 9303] Length = 367 Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 101/348 (29%), Positives = 165/348 (47%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + A L + DP + + + + RER L+ + + +Q + +L Sbjct: 12 LETAKTSFQSLERQLADPDVAADPKLLESIARERARLEPLVLDFEALQHVEQEWQETKQL 71 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ-----FESLLSGEADSNDAYLEVHAGAGGTES 130 E ++ + + + L S D LE+ AGAGG E+ Sbjct: 72 LRESRGDEAMESLAQEELQQLEARKTVLVRRLTLALLPSDPRDQRSVMLEIRAGAGGNEA 131 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY R+ ++ + + L + + G + L IKG + LK E GVHR+ Sbjct: 132 CLWAGDLARMYERYGQRIGWSVQPLSATEADLGGFRELILSIKGDAVFSQLKFEAGVHRV 191 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P D++E++I S+ I T R+ GAGGQ+VN ++AV Sbjct: 192 QRVPTTESQGRVHTSTATVAVMP-EADAVEVQIDPSELEISTARSGGAGGQNVNKVETAV 250 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ V C Q+RSQ +N+ +A +LRAKL LE Q E A + + ++G G Sbjct: 251 DLLHKPTGIRVFCTQQRSQLQNRERAMEILRAKL--LERQIAEANARESSTRRAQVGTGD 308 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + D R + VL G L++ + A +A ++ Sbjct: 309 RSEKIRTYNYKD-NRTTDHRLGRNFS-LEPVLTGQLEELIGACIAEEQ 354 >gi|114797902|ref|YP_759355.1| peptide chain release factor 1 [Hyphomonas neptunium ATCC 15444] gi|119361550|sp|Q0C4I8|RF1_HYPNA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|114738076|gb|ABI76201.1| peptide chain release factor 1 [Hyphomonas neptunium ATCC 15444] Length = 352 Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 110/347 (31%), Positives = 173/347 (49%), Gaps = 15/347 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72 + R + + N E L +E L + + + + L + + Sbjct: 3 LQQVIDRYEEVEARMGA---TSNTNEIIALSKEHAELRPVVEKARALMTVRKGLSEAEAM 59 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + E E D +R+ + Q L D D LEV AG GG E+ Sbjct: 60 IASGDREMAELAEMEIDDLRERLPGLEQEMQLLLLPKDVDDKADIVLEVRAGTGGDEAAL 119 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMYTR+A+ + E +++ G+ G K + G +G +K E GVHR+ R Sbjct: 120 FAGDLFRMYTRFAQIMGWSVEIVDVAPGDAGGYKEIIANVSGDGVFGRMKWESGVHRVQR 179 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ V P ++IEIE+ D RIDT R+SGAGGQHVNTTDSAVRI Sbjct: 180 VPATETQGRIHTSAATVAVLP-APENIEIEVRADDIRIDTMRSSGAGGQHVNTTDSAVRI 238 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311 TH+PTG++V E+SQH N+ +A + L+ +LY E ++ E+ A E+ ++IG G + Sbjct: 239 THLPTGIMVTSS-EKSQHVNREKAMDQLKIRLY--ERERAEKDAARSEARASQIGSGDRS 295 Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 +R+Y P + D R + S ++ GD L D ++A + + Sbjct: 296 QKVRTYNY-PENRLTDHRIGLTLYSLDRIITGDKLGDVIEALITEDQ 341 >gi|317968845|ref|ZP_07970235.1| peptide chain release factor 1 [Synechococcus sp. CB0205] Length = 367 Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 107/361 (29%), Positives = 165/361 (45%), Gaps = 22/361 (6%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L +L F L + DP + N + + + RER L+ + ++ Sbjct: 6 LRERLETARTTF---------ETLERQLADPDVAANPAQLEPIARERARLEPLVLGYDQL 56 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDA 117 +L E ++ + +I E L D Sbjct: 57 CQWRKQEQEARQLLKESRGDQEMEALAQEELSGLATQIAAMEEQLTLALLPRDPRDERSV 116 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 LE+ AGAGG E+ WA L RMY R+A+ +K + + + E G K L I+G + Sbjct: 117 MLEIRAGAGGDEAAIWAGDLARMYERYAQSVGWKVQPVSASEAELGGYKELILAIQGDSV 176 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 + LK E GVHR+ R+ +S R HTS +++ V P D +E++I +D I T R+ G Sbjct: 177 FSQLKYEAGVHRVQRVPATESQGRVHTSTATVAVMP-EADPVEVQIDPTDLEISTARSGG 235 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 AGGQ+VN ++AV + H PTG+ V C QERSQ +N+ +A +LRAKLYE EL E A Sbjct: 236 AGGQNVNKVETAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAKLYERELA--EANAK 293 Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + ++G G +IR+Y + D R + VL G L + + A ++ Sbjct: 294 ERSARLAQVGSGDRSEKIRTYNYKD-NRTTDHRLGRNFS-LEPVLQGQLAELIGACVSAD 351 Query: 355 K 355 + Sbjct: 352 Q 352 >gi|217034576|ref|ZP_03439984.1| hypothetical protein HP9810_903g1 [Helicobacter pylori 98-10] gi|216942931|gb|EEC22416.1| hypothetical protein HP9810_903g1 [Helicobacter pylori 98-10] Length = 352 Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 104/345 (30%), Positives = 178/345 (51%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R L + ++ + L +E+ ++ KE L + EL Sbjct: 8 LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISVASKEYLSILENIKENKEL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ + +E L+ K ++E + + D + YLE+ AG GG E+ + Sbjct: 68 LEDKELSELAKEELKILETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L + Y R+A+ +K+K E + + G K LIKG Y LK E G HR+ R+ Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PT + V Q E+SQHKNK +A +L+A+LYE ++++++ + K ++G G + Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + + R N+ S +++ G+LD+ + +A + Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348 >gi|256842350|ref|ZP_05547853.1| peptide chain release factor RF-2 [Parabacteroides sp. D13] gi|256735957|gb|EEU49288.1| peptide chain release factor RF-2 [Parabacteroides sp. D13] Length = 322 Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 123/315 (39%), Positives = 186/315 (59%), Gaps = 11/315 (3%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M++ + L I E+ + + E ++ +E ++ +E +F Sbjct: 1 MKKVKELKKWIELYSEVHAAAEELELAYEYVK--EEIITEEEVDAAYKKALHLLEDLEFR 58 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++L EAD L++++GAGGTESQDWA+ML+RMY RWAE +K +G+EAGI Sbjct: 59 NMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYQRWAENNGYKISIANYQEGDEAGI 118 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ T I+G AYG+LK E GVHRLVR+SPY++ +R TSF+S++V P+VDD+IE+++ Sbjct: 119 KTVTFNIEGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVKVEA 178 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAW 277 + DT+R+ GAGGQ+VN +S VR+ + ++++ + R Q KN+ A Sbjct: 179 AAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAM 238 Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 LR+ LY+ ELQ R E+ K +I WG QIRSYV + VKD RTN + + + Sbjct: 239 RQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNG 297 Query: 338 VLDGDLDDFMKATLA 352 V+DG +DDF+KA L Sbjct: 298 VMDGKIDDFIKAYLM 312 >gi|159904190|ref|YP_001551534.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT 9211] gi|238687119|sp|A9BCL8|RF1_PROM4 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|159889366|gb|ABX09580.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT 9211] Length = 365 Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats. Identities = 101/349 (28%), Positives = 170/349 (48%), Gaps = 15/349 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR------LCDN 69 + A L + DP + + + + RER L+ + +++ + + D Sbjct: 10 LETARSSFQNLELQLADPDVASDPKRLETIARERARLEPLVLDYEKLLEIEEELLEVKDV 69 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L + + ++ + + L + L + L D LE+ AGAGG E Sbjct: 70 LRESKSDKDLEELAQDEMRKLELFKTNLINQLT-LALLPKDPRDERSVMLEIRAGAGGDE 128 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + WA L RMY R+ +K + + D + G + + +KG + + LK E GVHR Sbjct: 129 ACIWAGDLARMYERYGQKIGWSVRPISSTDADLGGFRELIISVKGDSVFSQLKFEAGVHR 188 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS +++ V P D +E+++ D I T R+ GAGGQ+VN ++A Sbjct: 189 VQRVPATESQGRVHTSTATVAVMP-EADPVEVQLDPGDLEISTARSGGAGGQNVNKVETA 247 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 V + H PTG+ V C QERSQ +N+ +A +LRAKL LE++ E A + ++G G Sbjct: 248 VDLLHKPTGIRVFCTQERSQLQNRERAMEILRAKL--LEMEIAEANAKERSARLAQVGTG 305 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + D R I +VL+G+LD+ + A +A ++ Sbjct: 306 DRSEKIRTYNYKD-NRTTDHRLGINFP-LENVLEGELDNLIGACIAEEQ 352 >gi|317176897|dbj|BAJ54686.1| peptide chain release factor 1 [Helicobacter pylori F16] Length = 352 Score = 196 bits (497), Expect = 6e-48, Method: Composition-based stats. Identities = 104/345 (30%), Positives = 178/345 (51%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R L + ++ + L +E+ ++ KE L + EL Sbjct: 8 LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSFIEEISITSKEYLSVLENIKENKEL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ + +E L+ K ++E + + D + YLE+ AG GG E+ + Sbjct: 68 LEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L + Y R+A+ +K+K E + + G K LIKG Y LK E G HR+ R+ Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PT + V Q E+SQHKNK +A +L+A+LYE ++++++ + K ++G G + Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + + R N+ S +++ G+LD+ + +A + Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348 >gi|159899315|ref|YP_001545562.1| peptide chain release factor 1 [Herpetosiphon aurantiacus ATCC 23779] gi|159892354|gb|ABX05434.1| peptide chain release factor 1 [Herpetosiphon aurantiacus ATCC 23779] Length = 365 Score = 196 bits (497), Expect = 6e-48, Method: Composition-based stats. Identities = 108/345 (31%), Positives = 163/345 (47%), Gaps = 14/345 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R LN + P + + L RE+ L + +E L Sbjct: 9 LARVEARYIELNDEMTQPDALSDHVRLTTLAREQTELGELVGRYREFMQAEKSVEEAKAL 68 Query: 76 ALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EE+D + + + R++ + L D + +E+ G GG E+ Sbjct: 69 LREENDPELREMAQLEIDELSARMEAIGAEVRVLLLPRDPNDEKNVIIEIRQGEGGDEAA 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + + RMY R+AE R +KTE + + + G K ++G A+ LK E GVHR+ Sbjct: 129 LFGADVYRMYQRYAEIRGWKTEVMSLSENGIGGFKEVIFEVQGQGAWSRLKYEGGVHRVQ 188 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS ++ V P + +EI + D RID YR+ G GGQ VNTTDSAVR Sbjct: 189 RVPATEARGRIHTSTITVAVLP-EVEETAVEIKQEDYRIDVYRSGGHGGQGVNTTDSAVR 247 Query: 252 ITHI---PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 I + P +VV CQ RSQ KN+ A N+LRA+LY E +KR++ +GES ++G Sbjct: 248 IVYKAGTPEEIVVVCQDTRSQIKNRESALNVLRARLYAREQEKRQKE--LGESRLAQVGS 305 Query: 309 GRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 G + +R+Y P + D R ++ VLDG LD + A Sbjct: 306 GERAEKMRTYNY-PQDRITDHRIGQNISNLPVVLDGALDRLIDAL 349 >gi|315586075|gb|ADU40456.1| peptide chain release factor RF1 [Helicobacter pylori 35A] Length = 352 Score = 196 bits (497), Expect = 6e-48, Method: Composition-based stats. Identities = 105/345 (30%), Positives = 178/345 (51%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R L + ++ + L +E+ ++ KE L + EL Sbjct: 8 LSSILKRYDELTALLSSAEVVSDIKKLTELSKEQSSIEEISIASKEYLSVLENIKENKEL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ + +E L+ K ++E + + D + YLE+ AG GG E+ + Sbjct: 68 LEDKELSELAKEELKLLETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L + Y R+A+ +K+K E + + G K LIKG Y LK E G HR+ R+ Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P D +EI I+ SD +I+ +RA G GGQ VNTTDSAVRITH Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEISINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PT + V Q E+SQHKNK +A +L+A+LYE ++++++ + K ++G G + Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + + R N+ S +++ G+LD+ + +A + Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348 >gi|33864028|ref|NP_895588.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT 9313] gi|81576937|sp|Q7V518|RF1_PROMM RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|33635612|emb|CAE21936.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT 9313] Length = 365 Score = 196 bits (497), Expect = 6e-48, Method: Composition-based stats. Identities = 101/348 (29%), Positives = 165/348 (47%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + A L + DP + + + + RER L+ + + +Q + +L Sbjct: 10 LETAKTSFQSLERQLADPDVAADPKLLESIARERARLEPLVLDFEALQHVEQEWQETKQL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ-----FESLLSGEADSNDAYLEVHAGAGGTES 130 E ++ + + + L S D LE+ AGAGG E+ Sbjct: 70 LRESRGDDAMESLAQEELQQLEARKTVLVRRLTLALLPSDPRDQRSVMLEIRAGAGGNEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY R+ ++ + + L + + G + L IKG + LK E GVHR+ Sbjct: 130 CLWAGDLARMYERYGQRIGWSVQPLSATEADLGGFRELILSIKGDAVFSQLKFEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P D++E++I S+ I T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADAVEVQIDPSELEISTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ V C Q+RSQ +N+ +A +LRAKL LE Q E A + + ++G G Sbjct: 249 DLLHKPTGIRVFCTQQRSQLQNRERAMEILRAKL--LERQIAEANARESSTRRAQVGTGD 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + D R + VL G L++ + A +A ++ Sbjct: 307 RSEKIRTYNYKD-NRTTDHRLGRNFS-LEPVLTGQLEELIGACIAEEQ 352 >gi|168830308|gb|ACA34405.1| PrfA [uncultured bacterium pTW2] Length = 360 Score = 196 bits (497), Expect = 6e-48, Method: Composition-based stats. Identities = 109/329 (33%), Positives = 163/329 (49%), Gaps = 8/329 (2%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 DP + + L RE L+ + D + + + + +E Sbjct: 25 DPGTIADAERFRALSREFAQLEPVAVALAAENRAQRDLAAAQAMRSDPELGGLAEEEIAA 84 Query: 92 LQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 + + + D + YLEV AG GG E+ +A L RMY R+AE++ + Sbjct: 85 ANARLQELESELMAQLVRRDPRDDGNLYLEVRAGTGGDEAAIFAGDLFRMYARYAERQGW 144 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K E GE G K ++G AY LK E G HR+ R+ +S R HTS +++ Sbjct: 145 KLEVESASVGEHGGYKEIVARVEGRGAYSKLKFESGTHRVQRVPDTESQGRIHTSAATVA 204 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + + IEI+ +D RIDT+R+SGAGGQHVN TDSA+RITH+P+GVVV+ Q ERSQH Sbjct: 205 IIAEDSSDVAIEINPADLRIDTFRSSGAGGQHVNKTDSAIRITHLPSGVVVENQTERSQH 264 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLR 327 N+ +A LRA L E E +RE A + K ++G G +IR+Y P + D R Sbjct: 265 ANRDKAMKRLRAMLVEAETSRRE--AAQAQDRKLQVGSGDRSQRIRTYNY-PQGRITDHR 321 Query: 328 T-NIEKTSPSDVLDGDLDDFMKATLAIKK 355 + +VL+G+LD ++ ++ Sbjct: 322 VEGLTLYDLPNVLEGNLDALIERLAREQQ 350 >gi|150009345|ref|YP_001304088.1| peptide chain release factor RF-2 [Parabacteroides distasonis ATCC 8503] gi|262384740|ref|ZP_06077873.1| peptide chain release factor RF-2 [Bacteroides sp. 2_1_33B] gi|149937769|gb|ABR44466.1| peptide chain release factor RF-2 [Parabacteroides distasonis ATCC 8503] gi|262293721|gb|EEY81656.1| peptide chain release factor RF-2 [Bacteroides sp. 2_1_33B] Length = 322 Score = 196 bits (497), Expect = 6e-48, Method: Composition-based stats. Identities = 123/315 (39%), Positives = 186/315 (59%), Gaps = 11/315 (3%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M++ + L I E+ + + E ++ +E ++ +E +F Sbjct: 1 MKKVKELKKWIELYGEVHAAAEELELAYEYVK--EEIITEEEVDAAYKKALHLLEDLEFR 58 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++L EAD L++++GAGGTESQDWA+ML+RMY RWAE +K +G+EAGI Sbjct: 59 NMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYQRWAENNGYKISIANYQEGDEAGI 118 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ T I+G AYG+LK E GVHRLVR+SPY++ +R TSF+S++V P+VDD+IE+++ Sbjct: 119 KTVTFNIEGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVKVET 178 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAW 277 + DT+R+ GAGGQ+VN +S VR+ + ++++ + R Q KN+ A Sbjct: 179 AAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAM 238 Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 LR+ LY+ ELQ R E+ K +I WG QIRSYV + VKD RTN + + + Sbjct: 239 RQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNG 297 Query: 338 VLDGDLDDFMKATLA 352 V+DG +DDF+KA L Sbjct: 298 VMDGKIDDFIKAYLM 312 >gi|261838950|gb|ACX98715.1| peptide chain release factor RF-1 [Helicobacter pylori 52] Length = 352 Score = 196 bits (497), Expect = 6e-48, Method: Composition-based stats. Identities = 103/345 (29%), Positives = 178/345 (51%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R L + ++ + L +E+ ++ KE L + EL Sbjct: 8 LSSILKRYDELTALLSSAEVVSDIKKLTELSKEQSSIEEISITSKEYLSVLENIKENKEL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ + +E L+ K ++E + + D + YLE+ AG GG E+ + Sbjct: 68 LEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L + Y R+A+ +K+K E + + G K LIKG Y LK E G HR+ R+ Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P D +E+ ++ SD +I+ +RA G GGQ VNTTDSAVRITH Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSLNPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PT + V Q E+SQHKNK +A +L+A+LYE ++++++ + K ++G G + Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + + R N+ S +++ G+LD+ + +A + Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348 >gi|113475767|ref|YP_721828.1| peptide chain release factor 2 [Trichodesmium erythraeum IMS101] gi|110166815|gb|ABG51355.1| bacterial peptide chain release factor 2 (bRF-2) [Trichodesmium erythraeum IMS101] Length = 288 Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats. Identities = 130/255 (50%), Positives = 182/255 (71%) Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159 + + + LLSG D N A + ++AGAGGT++QDWA MLLRMYTRW E+ K+K + EI + Sbjct: 25 DQWELQQLLSGLYDQNGAVVTINAGAGGTDAQDWAEMLLRMYTRWGEEHKYKVQLAEISE 84 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 G+EAG+KSATL I G AYG+LK E+G HRLVRISP+++N +R TSF+ + V P++D S+ Sbjct: 85 GDEAGLKSATLEIIGRYAYGYLKAEKGTHRLVRISPFNANGKRQTSFAGVEVMPILDHSV 144 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 E++I E D I T R+ G GGQ+VN ++AVR+ HIPTG+ V+C QERSQ +NK +A + Sbjct: 145 ELDIPEKDLEITTSRSGGKGGQNVNKVETAVRVVHIPTGLSVRCTQERSQLQNKDKALAL 204 Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 L+A+L + ++R + N E WG QIR+YV PYQMVKDLRT E T+ +DV+ Sbjct: 205 LKARLLIIAQEQRAQEINEIRGDMVEAAWGNQIRNYVFHPYQMVKDLRTQKETTAINDVM 264 Query: 340 DGDLDDFMKATLAIK 354 +G+LD F++A L + Sbjct: 265 NGELDQFIEAYLRQE 279 >gi|203284116|ref|YP_002221856.1| peptide chain release factor A [Borrelia duttonii Ly] gi|201083559|gb|ACH93150.1| peptide chain release factor A [Borrelia duttonii Ly] Length = 359 Score = 195 bits (496), Expect = 7e-48, Method: Composition-based stats. Identities = 125/342 (36%), Positives = 188/342 (54%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++ L K +D +L +N E +++E +L+ E Q L ++ Sbjct: 8 LNPIESKIKILEEKLQDVNLIKNQKEYSKIIKEYNYLEKIKEKKDEYQHILNQINENQKI 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 EED+ + + + + + + L E D + +E+ AG GG E+ Sbjct: 68 LSEEDNLEMKDLIKQEIAHLYSKKDEIENTIKILLLHQDENDDKNIIIEIRAGTGGEEAA 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A+ L MYT+++EK+K+KTE + ++ E G K + IKG + + LK E GVHR+ Sbjct: 128 LFAHNLYEMYTKYSEKKKWKTELINFNETELGGFKEVSFEIKGKDVFKKLKHESGVHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +SN + TS +++ V P V+D+ I++ D RID YR+SGAGGQHVNTTDSAVR Sbjct: 188 RIPITESNGKLQTSAATVAVLPEVEDTDIE-INDKDLRIDVYRSSGAGGQHVNTTDSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+V QCQ ERSQHKNK QA +LRA+LYELE K++E K ++G G Sbjct: 247 ITHLPTGIVAQCQNERSQHKNKEQAMKILRARLYELENLKKQE--QRSNDRKQQVGSGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R NI +++ G+LD + Sbjct: 305 SERIRTYNF-PQNRVTDHRANISLYKLEEIMQGELDSLLNTL 345 >gi|15644707|ref|NP_206877.1| peptide chain release factor 1 [Helicobacter pylori 26695] gi|2500136|sp|P55998|RF1_HELPY RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|2313158|gb|AAD07148.1| peptide chain release factor RF-1 (prfA) [Helicobacter pylori 26695] Length = 352 Score = 195 bits (496), Expect = 7e-48, Method: Composition-based stats. Identities = 104/345 (30%), Positives = 178/345 (51%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R L + ++ + L +E+ ++ KE L + EL Sbjct: 8 LSSILKRYDELTALLSSAEVVSDIKKLTELSKEQSSIEEISIASKEYLSVLENIKENKEL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ + +E L+ K ++E + + D + YLE+ AG GG E+ + Sbjct: 68 LEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L + Y R+A+ +K+K E + + G K LIKG Y LK E G HR+ R+ Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PT + V Q E+SQHKNK +A +L+A+LYE ++++++ + K ++G G + Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + + R N+ S +++ G+LD+ + +A + Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348 >gi|317179532|dbj|BAJ57320.1| peptide chain release factor 1 [Helicobacter pylori F30] Length = 352 Score = 195 bits (496), Expect = 7e-48, Method: Composition-based stats. Identities = 104/343 (30%), Positives = 178/343 (51%), Gaps = 9/343 (2%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 + ++R L + ++ + L +E+ ++ KE L + EL Sbjct: 10 SILKRYDELTALLSSTEVISDIKKLTELSKEQSSIEEISVASKEYLSVLENIKENKELLE 69 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWANM 136 +++ + +E L+ K ++E + + D + YLE+ AG GG E+ + Sbjct: 70 DKELSELAKEELKLLETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFVGD 129 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L + Y R+A+ +K+K E + + G K LIKG Y LK E G HR+ R+ Sbjct: 130 LFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSKLKFEAGTHRVQRVPET 189 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S R HTS ++ + P D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH+P Sbjct: 190 ESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITHLP 248 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 T + V Q E+SQHKNK +A +L+A+LYE ++++++ + K ++G G +IR Sbjct: 249 TNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSERIR 306 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 +Y P + + R N+ S +++ G+LD+ + +A + Sbjct: 307 TYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348 >gi|255016197|ref|ZP_05288323.1| peptide chain release factor RF-2 [Bacteroides sp. 2_1_7] Length = 322 Score = 195 bits (496), Expect = 7e-48, Method: Composition-based stats. Identities = 123/315 (39%), Positives = 186/315 (59%), Gaps = 11/315 (3%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M++ + L I E+ + + E ++ +E ++ +E +F Sbjct: 1 MKKVKELKKWIELYGEVHAAAEELELAYEYVK--EEIITEEEVDAAYKKALHLLEDLEFR 58 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++L EAD L++++GAGGTESQDWA+ML+RMY RWAE +K +G+EAGI Sbjct: 59 NMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYQRWAENNGYKISIANYQEGDEAGI 118 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ T I+G AYG+LK E GVHRLVR+SPY++ +R TSF+S++V P+VDD+IE+++ Sbjct: 119 KTVTFNIEGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVKVEA 178 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAW 277 + DT+R+ GAGGQ+VN +S VR+ + ++++ + R Q KN+ A Sbjct: 179 AAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAM 238 Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 LR+ LY+ ELQ R E+ K +I WG QIRSYV + VKD RTN + + + Sbjct: 239 RQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNG 297 Query: 338 VLDGDLDDFMKATLA 352 V+DG +DDF+KA L Sbjct: 298 VMDGKIDDFIKAYLM 312 >gi|108562503|ref|YP_626819.1| peptide chain release factor 1 [Helicobacter pylori HPAG1] gi|119361549|sp|Q1CV77|RF1_HELPH RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|107836276|gb|ABF84145.1| peptide chain release factor RF-1 [Helicobacter pylori HPAG1] Length = 352 Score = 195 bits (496), Expect = 7e-48, Method: Composition-based stats. Identities = 103/345 (29%), Positives = 178/345 (51%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R L + ++ + L +E+ ++ KE L + EL Sbjct: 8 LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLENIKENKEL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ + +E L+ K ++E + + D + YLE+ AG GG E+ + Sbjct: 68 LEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGNEAGIFV 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L + Y R+A+ +K++ E + + G K LIKG Y LK E G HR+ R+ Sbjct: 128 GDLFKAYCRYADLKKWRVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PT + V Q E+SQHKNK +A +L+A+LYE ++++++ + K ++G G + Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + + R N+ S +++ G+LD+ + +A + Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348 >gi|308062940|gb|ADO04827.1| peptide chain release factor 1 [Helicobacter pylori Sat464] Length = 352 Score = 195 bits (496), Expect = 7e-48, Method: Composition-based stats. Identities = 104/345 (30%), Positives = 179/345 (51%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R + L + ++ + L +E+ ++ KE L + EL Sbjct: 8 LSSILKRYNELTALLSSAEVVSDIKKLTELSKEQSSIEEISVASKEYLSVLENIKENKEL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ + +E L+ K ++E + + D + YLE+ AG GG E+ + Sbjct: 68 LEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L + Y R+A+ +K+K E + + G K LIKG Y LK E G HR+ R+ Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PT + V Q E+SQHKNK +A +L+A+LYE ++++++ + K ++G G + Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + + R N+ S +++ G+LD+ + +A + Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348 >gi|146337703|ref|YP_001202751.1| peptide chain release factor 1 [Bradyrhizobium sp. ORS278] gi|146190509|emb|CAL74508.1| peptide chain release factor 1 [Bradyrhizobium sp. ORS278] Length = 361 Score = 195 bits (496), Expect = 7e-48, Method: Composition-based stats. Identities = 109/345 (31%), Positives = 170/345 (49%), Gaps = 18/345 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + + L + N + RE L+ I +K + + + L Sbjct: 9 LDVLLAHHASLEAELLGQ---VNSDRYVQITRELAELNPLIDAVKAYRAGVKELADTEAL 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL------LSGEADSNDAYLEVHAGAGGTE 129 + D + ++ +R +L + E D + LE+ AG GG E Sbjct: 66 IADPDTDAEMR-AMAESERDELVARRGELEQKIRIALLPKDAMDDRNVVLEIRAGTGGDE 124 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A L RMY R+A + +K E + +G G K ++G A+ LK E GVHR Sbjct: 125 ASLFAGDLFRMYERFASLQGWKVEVISASEGTVGGYKEIIAEVQGRGAFAKLKFESGVHR 184 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ ++ R HTS +++ V P + ++++I + D RI+T RA GAGGQHVN T+SA Sbjct: 185 VQRVPDTETQGRIHTSAATVAVLP-EIEDVDVDIKQDDLRIETMRAQGAGGQHVNKTESA 243 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 +RITHIPTG+VV Q RSQHKN+A A N+LR+++Y+ E QK + A K ++G G Sbjct: 244 IRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAERQKVD--AARSAERKEKVGSG 301 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350 +IR+Y P V D R N+ V+ G+ L + + A Sbjct: 302 DRSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGEALGELVDAL 345 >gi|317181378|dbj|BAJ59162.1| peptide chain release factor 1 [Helicobacter pylori F57] gi|332672916|gb|AEE69733.1| peptide chain release factor RF1 [Helicobacter pylori 83] Length = 352 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 104/343 (30%), Positives = 178/343 (51%), Gaps = 9/343 (2%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 + ++R L + ++ + L +E+ ++ KE L + EL Sbjct: 10 SILKRYDELTALLSSAEVVSDIKKLTELSKEQSSIEEISVASKEYLSVLENIKENKELLE 69 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWANM 136 +++ + +E L+ K ++E + + D + YLE+ AG GG E+ + Sbjct: 70 DKELSELAKEELKLLETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFVGD 129 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L + Y R+A+ +K+K E + + G K LIKG Y LK E G HR+ R+ Sbjct: 130 LFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVPET 189 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S R HTS ++ + P D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH+P Sbjct: 190 ESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITHLP 248 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 T + V Q E+SQHKNK +A +L+A+LYE ++++++ + K ++G G +IR Sbjct: 249 TNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSERIR 306 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 +Y P + + R N+ S +++ G+LD+ + +A + Sbjct: 307 TYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348 >gi|188526883|ref|YP_001909570.1| peptide chain release factor 1 [Helicobacter pylori Shi470] gi|238691882|sp|B2URQ8|RF1_HELPS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|188143123|gb|ACD47540.1| peptide chain release factor 1 [Helicobacter pylori Shi470] Length = 352 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 104/345 (30%), Positives = 178/345 (51%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R L + ++ + L +E+ ++ KE L + EL Sbjct: 8 LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISVASKEYLSVLENIKENKEL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ + +E L+ K ++E + + D + YLE+ AG GG E+ + Sbjct: 68 LEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L + Y R+A+ +K+K E + + G K LIKG Y LK E G HR+ R+ Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINSSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PT + V Q E+SQHKNK +A +L+A+LYE ++++++ + K ++G G + Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + + R N+ S +++ G+LD+ + +A + Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348 >gi|108804488|ref|YP_644425.1| peptide chain release factor 1 [Rubrobacter xylanophilus DSM 9941] gi|119361598|sp|Q1AVG5|RF1_RUBXD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|108765731|gb|ABG04613.1| bacterial peptide chain release factor 1 (bRF-1) [Rubrobacter xylanophilus DSM 9941] Length = 364 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 112/342 (32%), Positives = 168/342 (49%), Gaps = 11/342 (3%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 R L + DP ++ + + RE + + + L + EL + Sbjct: 14 ARYRELTEELSDPAIFNDQRRYAEVAREHSRMRRGAELSERFLEALREEREARELIPAAE 73 Query: 81 DCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 + + + R E + E + D D LE+ AG GG E+ +A Sbjct: 74 SAEEREFFAGEAREAGRRAGELAEEIRSELIDRDPNDDKDVILEIRAGTGGDEAALFAGD 133 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L MY R+A++ F+ L+ E G K + I+G AY K E G HR+ R+ Sbjct: 134 LYEMYARYADRLGFRHRVLDASPAEVGGYKEIIVEIEGDGAYSVFKHEGGTHRVQRVPKT 193 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S R HTS +++ V P + +E+EI+ +D ID YR+SG GGQ VNTTDSAVRITH P Sbjct: 194 ESQGRIHTSTATVAVLP-EAEEVEVEINPNDLEIDVYRSSGPGGQSVNTTDSAVRITHKP 252 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IR 313 TG+VV CQ E+SQ +NK QA +LR++L LE + RE G+ + G G + IR Sbjct: 253 TGLVVTCQNEKSQLQNKEQALRILRSRL--LEREMRERQEREGQMRLAQFGSGDRSAKIR 310 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +Y P + D R + + VL G+L++F KA A ++ Sbjct: 311 TYNF-PQGRITDHRVGLTVHNLEAVLGGELEEFTKALAAKER 351 >gi|319948468|ref|ZP_08022604.1| peptide chain release factor 1 [Dietzia cinnamea P4] gi|319437888|gb|EFV92872.1| peptide chain release factor 1 [Dietzia cinnamea P4] Length = 361 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 114/346 (32%), Positives = 169/346 (48%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ + L + DP L ++ A+ + + L + + + D EL Sbjct: 12 IDDVLSEYGGLEAQLSDPTLHEDAAAARRVGKRFAELTPIVQCHRALVSTRDDAAAAREL 71 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A ++ + + D D++D +E+ +G GG ES +A Sbjct: 72 AGDDPSFAEEADRLDAEAAELEARLADLL--APRDPHDADDVVMEIKSGEGGEESALFAA 129 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-----YGWLKGEQGVHRL 190 L RMYTR+AEK + E L + + + G K A+ I+ + LK E GVHR+ Sbjct: 130 DLARMYTRYAEKHGWIVEVLGVTESDLGGYKDASFSIRSRQPSRDGVWSRLKFEGGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS + + V+P +D +EI ESD RID YR+SG GGQ VNTTDSAV Sbjct: 190 QRVPVTESQGRVHTSAAGVLVFPEPEDVGPVEIDESDLRIDVYRSSGKGGQGVNTTDSAV 249 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG VV CQ ERSQ +NK +A +L A+L + A G +S+ + Sbjct: 250 RITHLPTGTVVTCQNERSQLQNKQRALQVLAARLQAAAEEAAGAEAAEGRASQVRTVDRS 309 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + + VLDGDLD + A A ++ Sbjct: 310 ERIRTYNY-PENRIADHRVGFKAHNLDAVLDGDLDAVLDALAAEER 354 >gi|255559292|ref|XP_002520666.1| peptide chain release factor, putative [Ricinus communis] gi|223540051|gb|EEF41628.1| peptide chain release factor, putative [Ricinus communis] Length = 370 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 107/350 (30%), Positives = 173/350 (49%), Gaps = 17/350 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++A + L+ K DP + N E + L + LD +S + +D L Sbjct: 12 LESAEKTWKELSVKLADPDVVSNPTEYQKLAQSVAELDQVVSVYRRFKDCEKQLEETKAL 71 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEY-----KQFESLLSGEADSNDAYLEVHAGAGGTES 130 A EE + E + L S D+ + LEV AG GG E+ Sbjct: 72 AKEEGTDEDMAEMIALEIDSLSTELKGLEEKLKVLLLPSDPLDARNIMLEVRAGTGGDEA 131 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L+RMY ++ E+ +K + + E+ G K+ + +KG Y LK E GVHR+ Sbjct: 132 GLWAGDLVRMYEKYCEQNSWKYAIVSCSEAEKGGYKTYVMEVKGNRVYSKLKYESGVHRV 191 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ + P D +E+ I D + T R+ GAGGQ+VN ++AV Sbjct: 192 QRVPQTETQGRVHTSTATVAIMP-EADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAV 250 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ + C +ER+Q +NK +A +LRAKLY E++ RE+ +I K ++G G Sbjct: 251 DLFHKPTGIRIFCTEERTQLQNKTRALQLLRAKLY--EMKVREQQESIRNQRKLQVGTGA 308 Query: 310 --RQIRSYVLQPYQMVKDLR--TNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D R N E T L GD+++ ++A + ++ Sbjct: 309 RAEKIRTYNYKD-NRVTDHRLKMNFELT---SFLQGDIENAVQACASTEQ 354 >gi|222100137|ref|YP_002534705.1| Peptide chain release factor 2 [Thermotoga neapolitana DSM 4359] gi|221572527|gb|ACM23339.1| Peptide chain release factor 2 [Thermotoga neapolitana DSM 4359] Length = 218 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 120/210 (57%), Positives = 155/210 (73%) Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 RWAE++ F E +E GEEAGIK AT+LIKG AYG+LK E GVHRLVRISP+D+ R Sbjct: 1 MRWAERKGFDVEIVEYQPGEEAGIKDATILIKGEYAYGYLKHESGVHRLVRISPFDAARR 60 Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 RHTSF+S+ V P ++D + IEI D +I+T+RASG GGQHVN T+SAVRITHIPTG+VV Sbjct: 61 RHTSFASVNVIPEIEDDVHIEIKPEDLKIETFRASGHGGQHVNKTESAVRITHIPTGIVV 120 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 CQ ERSQH+NK A +L+A+LY+LEL+K+ + + +I WG QIRSYV PY Sbjct: 121 TCQNERSQHQNKQTALKILKARLYQLELEKKRKEIQEIQGELKDISWGNQIRSYVFHPYT 180 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +VKD RT +E ++ V+DGD+D F++A L Sbjct: 181 LVKDHRTGVETSNVDAVMDGDIDIFIEAEL 210 >gi|317010358|gb|ADU84105.1| peptide chain release factor 1 [Helicobacter pylori SouthAfrica7] Length = 352 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 104/345 (30%), Positives = 179/345 (51%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R L + ++ + L +E+ ++ + KE L + EL Sbjct: 8 LSSILKRYDELTALLSSAEVVNDIKKLTELSKEQSSIEEISTASKEYLSVLENIKENKEL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ + +E L+ K E+E + + D + YLE+ AG GG E+ + Sbjct: 68 LEDKELSELAKEELKALEIKKSELEATIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L + Y R+A+ +K+K E + + G K LIKG Y LK E G HR+ R+ Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PT + V Q E+SQHKNK +A +L+A+LYE ++++++ + K ++G G + Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 +R+Y P + + R N+ S +++ G+LD+ + +A + Sbjct: 305 VRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348 >gi|39933683|ref|NP_945959.1| peptide chain release factor 1 [Rhodopseudomonas palustris CGA009] gi|192289040|ref|YP_001989645.1| peptide chain release factor 1 [Rhodopseudomonas palustris TIE-1] gi|61214634|sp|Q6NC66|RF1_RHOPA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|229470355|sp|B3QCF6|RF1_RHOPT RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|39647529|emb|CAE26050.1| peptide chain release factor 1 [Rhodopseudomonas palustris CGA009] gi|192282789|gb|ACE99169.1| peptide chain release factor 1 [Rhodopseudomonas palustris TIE-1] Length = 361 Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats. Identities = 101/349 (28%), Positives = 170/349 (48%), Gaps = 16/349 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + + L + ++ + RE L+ + +K + + + EL Sbjct: 9 LDVLLAHHAALEAQLMAQVGAED---YVRITRELSELNPLVEAVKSYRQVRDELGEIDEL 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130 + ++ ++ + + + + D + LE+ AG GG E+ Sbjct: 66 LEDPATEPEMRAMAEAERDALDAHRDELIQQIRIALLPKDAMDERNVMLEIRAGTGGDEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY ++A + + E + +G G K +KG A+ LK E GVHR+ Sbjct: 126 SLFAGDLFRMYEKFAALQGWSVEVISASEGTVGGYKEIIAEVKGRGAFAKLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + ++++I + D RI+T RA GAGGQHVN T+SA+ Sbjct: 186 QRVPDTETQGRIHTSAATVAVLP-EVEDVDVDIKQDDLRIETMRAQGAGGQHVNKTESAI 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+VV Q RSQHKN+A A N+LR+++Y+ E Q+ + A K ++G G Sbjct: 245 RITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAEQQRLD--AARSAERKAKVGSGD 302 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 +IR+Y P V D R N+ V+ G+ L + + A + Sbjct: 303 RSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGEALGELIDALTTEHQ 350 >gi|116515052|ref|YP_802681.1| hypothetical protein BCc_111 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|122285552|sp|Q057W1|RF1_BUCCC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|116256906|gb|ABJ90588.1| peptide chain release factor 1 [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 357 Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats. Identities = 110/344 (31%), Positives = 173/344 (50%), Gaps = 7/344 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R L + + + E L +E+ +L + + + L Sbjct: 9 LKSLKKRYIQLEKLLSNNYSKFDKREFSKLSKEKANLYDLYKEFMSWLSIKSEIKDIQLL 68 Query: 76 ALEED-DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D +E L+R K + + + D N ++E+ A GG E+ ++ Sbjct: 69 LNDLDLSTLAQEELLIALKRKKEIEKKIKMLLIPIDPYDKNSCFIEIRAATGGHEAAIFS 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L +MY ++A+ + +K + + +H+GE+ G K L + G A G LK E G HR+ R+ Sbjct: 129 GDLCKMYMKYADFKSWKVDIINMHEGEKGGYKEIILKVIGIGACGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P V S I ++ SD +IDT+R+SGAGGQHVNTTDSAVRITH Sbjct: 189 QTESQGRVHTSACTVAIMPEVPKSKRIILNTSDLKIDTFRSSGAGGQHVNTTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311 +PTG VV+CQ ERSQHKNK +A ++L AK+Y E+ K+ +G G + Sbjct: 249 LPTGCVVECQDERSQHKNKEKALSVLSAKIYSKM--NAEKKLKNSLMRKSLLGTGERSDR 306 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R+Y V D R N+ ++VL G LD ++ L + Sbjct: 307 NRTYNFS-QNRVTDHRINLTIYRLNEVLLGKLDLLIEPLLQEHQ 349 >gi|257791638|ref|YP_003182244.1| peptide chain release factor 1 [Eggerthella lenta DSM 2243] gi|257475535|gb|ACV55855.1| peptide chain release factor 1 [Eggerthella lenta DSM 2243] Length = 352 Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats. Identities = 117/346 (33%), Positives = 173/346 (50%), Gaps = 12/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ + K DP + + E L +E + +E D E+ Sbjct: 5 LTKIIEAYEDVQAKMGDPAVLADQKEYNRLAKEYANQGPLAKKAREYVQAADDLAEAREM 64 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D E ++ E +F + + AD D +E+ A AGG E+ +A Sbjct: 65 LADPDMKEFALEEIAGIEAKLPALEEDIKFMLIPADPADDKDIIVEIRAAAGGDEAAIFA 124 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L +MY R+A + +KTE +++ E G K +KG + Y +K E GVHR+ R+ Sbjct: 125 GELYKMYERFASAQGWKTETMDMSASEAGGFKEIQFKVKGDHVYSVMKFESGVHRVQRVP 184 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P D +E+EI+E+D RID YRA G GGQ VNTTDSAVRITH Sbjct: 185 KTESQGRIHTSTATVAVLP-EADEVEVEINENDLRIDVYRAGGPGGQCVNTTDSAVRITH 243 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +P+G+VVQ Q ++SQ +NK A +LRA+LYE L +++ A G +IG G + Sbjct: 244 LPSGLVVQSQDQKSQLQNKIAAMAVLRARLYEKMLAEQQ--AAEGAKRLAQIGSGDRSEK 301 Query: 312 IRSYVLQPYQMVKDLRTNIE-KTSPSDVLDGD-LDDFMKATLAIKK 355 IR+Y P V D R + VL GD L D + A A + Sbjct: 302 IRTYN-GPQDRVTDHRIGFNGTYN--GVLLGDGLGDVITALQAADR 344 >gi|145220477|ref|YP_001131186.1| peptide chain release factor 2 [Prosthecochloris vibrioformis DSM 265] gi|145206641|gb|ABP37684.1| bacterial peptide chain release factor 2 (bRF-2) [Chlorobium phaeovibrioides DSM 265] Length = 300 Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats. Identities = 139/297 (46%), Positives = 198/297 (66%), Gaps = 1/297 (0%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + +++ L LA E + S +E ++ I+ E++ +F ++LSG+ D Sbjct: 1 MEGYRKMASDATSCREELTLADELGEESYAEELDASIAAIEAEMDAIEFRNMLSGKDDEG 60 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 +A + +HAGAGGTE+QDWA ML RMY RWAE++ FK + G+ AGIK+ATL I+GP Sbjct: 61 NAIITIHAGAGGTEAQDWAEMLYRMYMRWAERKGFKIYTDDYQAGDGAGIKTATLEIQGP 120 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 AYG+LK E GVHRLVR+SP+DSN+RRHTSF+S++ YP +EIE+ + D + T+R+ Sbjct: 121 YAYGYLKAENGVHRLVRVSPFDSNARRHTSFASVYTYPEAPPDVEIEVRKEDLELSTFRS 180 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 G GGQ+VN ++AVRI H+P+G+VV CQQERSQ +N+ +A ML A+LY+ + ++ + Sbjct: 181 GGKGGQNVNKVETAVRIKHVPSGIVVGCQQERSQFQNRERAMKMLMAQLYQRQREEEDAK 240 Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 E K +I WG QIRSYVL + +KD RTN E+ VLDGD+DDFM A L+ Sbjct: 241 KREVEGKKKKIEWGSQIRSYVLDD-RRIKDHRTNHERFDIETVLDGDIDDFMHAYLS 296 >gi|51473710|ref|YP_067467.1| peptide chain release factor 1 [Rickettsia typhi str. Wilmington] gi|61214605|sp|Q68WK7|RF1_RICTY RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|51460022|gb|AAU03985.1| peptide chain release factor 1 (RF-1) [Rickettsia typhi str. Wilmington] Length = 355 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 125/347 (36%), Positives = 186/347 (53%), Gaps = 16/347 (4%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + + + L K + + E +E L++ + IKE + Sbjct: 6 NLVKILDKYENLGRKLSS-GIIGD--EFVKASKEYAELEDIVVKIKEYNKVKSELEEANN 62 Query: 75 LALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 L LE + E +N I + L EADS A +EV AG+GG E Sbjct: 63 LRLEVALDNATLEMINNEIYILENLLPKLERAVRISLLPKDEADSKSAIIEVRAGSGGEE 122 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A +L MY R+AE + ++ E L I + G K A+ IKG + + LK E GVHR Sbjct: 123 AALFAAVLFNMYQRYAEFKGWRFEILAISNTGIGGYKEASASIKGKDVFSKLKFESGVHR 182 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS +++ V P + ++I+I + D RIDTYR+SGAGGQHVNTTDSA Sbjct: 183 VQRVPETESQGRIHTSAATVAVLP-EAEGVDIKIEDKDLRIDTYRSSGAGGQHVNTTDSA 241 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRITHIPTG+ V Q E+SQHKNKA+A +LRA+LY E ++R++ +S + ++G G Sbjct: 242 VRITHIPTGITVALQDEKSQHKNKAKALKILRARLY--EEKRRQKEQERSDSRRWQVGSG 299 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD-GDLDDFMKATLA 352 +IR+Y + V D R N+ +V+ G LD+F++A +A Sbjct: 300 DRSERIRTYNFL-HGRVSDHRINLTLYKIDEVVKHGQLDEFIEALIA 345 >gi|318042535|ref|ZP_07974491.1| peptide chain release factor 1 [Synechococcus sp. CB0101] Length = 365 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 112/361 (31%), Positives = 169/361 (46%), Gaps = 22/361 (6%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 LS +L+ FD L + DP + N + + + RER L+ + E+ Sbjct: 6 LSERLDAARTTFD---------TLERQLADPDVAANPAQLEPIARERARLEPLVMGYDEL 56 Query: 63 QD---RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF--ESLLSGEADSNDA 117 Q + LL + + D L + ++ +Q L D Sbjct: 57 QTLQGQEQQARELLRESRGDLDLEALAQEELAELATRISALEEQLTLALLPRDPRDERSV 116 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 LE+ AGAGG E+ WA L RMY R+A+ +K + + + E G K L IKG Sbjct: 117 MLEIRAGAGGDEAALWAGDLARMYERYAQSVGWKVQPVSASEAELGGYKELILAIKGDGV 176 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 + LK E GVHR+ R+ +S R HTS +++ V P D +E++I D I T R+ G Sbjct: 177 FSQLKFEAGVHRVQRVPATESQGRVHTSTATVAVMP-EADPVEVQIDPGDLEISTARSGG 235 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 AGGQ+VN ++AV + H PTG+ V C QERSQ +N+ +A +LRAKLYE EL A Sbjct: 236 AGGQNVNKVETAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAKLYERELA--TANAE 293 Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + ++G G +IR+Y + D R + VL G L + + A ++ Sbjct: 294 ERSARLAQVGTGDRSEKIRTYNYKD-NRTTDHRLGRNFS-LEPVLQGQLAELIGACVSAD 351 Query: 355 K 355 + Sbjct: 352 Q 352 >gi|261837535|gb|ACX97301.1| peptide chain release factor RF-1 [Helicobacter pylori 51] Length = 352 Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats. Identities = 104/343 (30%), Positives = 178/343 (51%), Gaps = 9/343 (2%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 + ++R L + ++ + L +E+ ++ KE L + EL Sbjct: 10 SILKRYDELTALLSSTEVVSDIKKLTELSKEQSSIEEISVASKEYLSVLENIKENKELLE 69 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWANM 136 +++ + +E L+ K ++E + + D + YLE+ AG GG E+ + Sbjct: 70 DKELSELAKEELKLLETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFVGD 129 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L + Y R+A+ +K+K E + + G K LIKG Y LK E G HR+ R+ Sbjct: 130 LFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVPET 189 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S R HTS ++ + P D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH+P Sbjct: 190 ESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITHLP 248 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 T + V Q E+SQHKNK +A +L+A+LYE ++++++ + K ++G G +IR Sbjct: 249 TNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSERIR 306 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 +Y P + + R N+ S +++ G+LD+ + +A + Sbjct: 307 TYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348 >gi|308061372|gb|ADO03260.1| peptide chain release factor 1 [Helicobacter pylori Cuz20] Length = 352 Score = 195 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 104/345 (30%), Positives = 178/345 (51%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R L + ++ + L +E+ ++ KE L + EL Sbjct: 8 LSSILKRYDELTALLSSTEVVSDIKKLTELSKEQSSIEEISVASKEYLSVLENIKENKEL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ + +E L+ K ++E + + D + YLE+ AG GG E+ + Sbjct: 68 LEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L + Y R+A+ +K+K E + + G K LIKG Y LK E G HR+ R+ Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PT + V Q E+SQHKNK +A +L+A+LYE ++++++ + K ++G G + Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + + R N+ S +++ G+LD+ + +A + Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348 >gi|91974579|ref|YP_567238.1| peptide chain release factor 1 [Rhodopseudomonas palustris BisB5] gi|119361592|sp|Q13F02|RF1_RHOPS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|91681035|gb|ABE37337.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodopseudomonas palustris BisB5] Length = 361 Score = 195 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 107/349 (30%), Positives = 171/349 (48%), Gaps = 16/349 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72 D + + L + + E + RE L+ + +E++D L D L Sbjct: 9 LDVLLAHHASLEAQLL-GEVGA--SEYVRITRELSELNPLVEAVKAYREVRDELGDVDAL 65 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTES 130 LE + + + E + ++ L + + LE+ AG GG E+ Sbjct: 66 LEDPDTDSEMRAMAEAERDALDAHRAELIQEIRVALLPKDAMDERNVMLEIRAGTGGDEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY ++A + + E + +G G K +KG A+ LK E GVHR+ Sbjct: 126 SLFAGDLFRMYEKFAALQGWSVEVISASEGSMGGFKEIIAEVKGRGAFAKLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + ++++I D +IDT RA GAGGQHVN T+SA+ Sbjct: 186 QRVPDTETQGRIHTSAATVAVLP-EVEEVDVDIKADDLKIDTMRAQGAGGQHVNKTESAI 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+VV Q RSQHKN+A A N+LR+++Y+ E Q+ + A K ++G G Sbjct: 245 RITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAEQQRLD--AARSAERKEKVGSGD 302 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 +IR+Y P V D R N+ V+ G+ L + + A + Sbjct: 303 RSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGEALGELIDALTTEHQ 350 >gi|308182253|ref|YP_003926380.1| peptide chain release factor 1 [Helicobacter pylori PeCan4] gi|308064438|gb|ADO06330.1| peptide chain release factor 1 [Helicobacter pylori PeCan4] Length = 352 Score = 195 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 103/345 (29%), Positives = 174/345 (50%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R L + ++ + L +E+ ++ KE L EL Sbjct: 8 LSSILKRYDELTALLSSAEVVSDIKKLTELSKEQSSIEEISIASKEYLSVLEGIKENKEL 67 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ + +E L+ K + + D + YLE+ AG GG E+ + Sbjct: 68 LEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L + Y R+A+ +K+K E + + G K LIKG Y LK E G HR+ R+ Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PT + V Q E+SQHKNK +A +L+A+LYE ++++++ + K ++G G + Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + + R N+ S +++ G+LD+ + +A + Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348 >gi|255079106|ref|XP_002503133.1| predicted protein [Micromonas sp. RCC299] gi|226518399|gb|ACO64391.1| predicted protein [Micromonas sp. RCC299] Length = 366 Score = 195 bits (494), Expect = 1e-47, Method: Composition-based stats. Identities = 90/348 (25%), Positives = 167/348 (47%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +++ + L + DP + + E + L + L + ++ + E+ Sbjct: 11 LESSERTHKELTFRLADPDVASDAKEFQKLSKALGELTGVVDMYARYKECQAEEADAREM 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130 + + ++ + + E + D + LE+ AG GG E+ Sbjct: 71 VKDAAGDAEMEAMAREEIAALKGEMDELEEKMTIALLPKDPLDDKNIMLEIRAGTGGDEA 130 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY R+A+ + + L + + G K + I G + Y LK E GVHR+ Sbjct: 131 GIWAGDLWRMYQRYAQSKGWSATILSSNAADFGGYKEIVVEINGDSVYSELKWEAGVHRV 190 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R TS +++ V P D +E++I + D I + R+ GAGGQ+VN ++A+ Sbjct: 191 QRVPATESQGRVQTSTATVAVMP-EVDEVEVKIDDKDIEISSARSGGAGGQNVNKVETAI 249 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ V C +ER+Q KN+ +A+ +LRAKL+E++L+++++ I K ++G G Sbjct: 250 DLLHKPTGIRVFCTEERTQLKNRIRAFQILRAKLFEIQLEEQQKE--IAGRRKAQVGSGA 307 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D R + + + GD+ + A+++ Sbjct: 308 RSEKIRTYNWKD-SRVSDHRLG-QNFPLDNFIGGDIGPAIGGCQAMEQ 353 >gi|317013501|gb|ADU80937.1| peptide chain release factor 1 [Helicobacter pylori Gambia94/24] Length = 352 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 102/345 (29%), Positives = 175/345 (50%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R L + ++ L +E+ ++ KE L + EL Sbjct: 8 LSSILKRYDELTALLSSVEVVSDIKRLTELSKEQSSIEEISVASKEYLSVLENIKENKEL 67 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ + +E L+ K + + D + YLE+ AG GG E+ + Sbjct: 68 LEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L + Y R+A+ +K+K E + + G K +LIKG Y LK E G HR+ R+ Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P D +E+ ++ SD +I+ +RA G GGQ VNTTDSAVRITH Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PT + V Q E+SQHKNK +A +L+A+LYE ++++++ + K ++G G + Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + + R N+ S +++ G+LD+ + +A + Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348 >gi|298377870|ref|ZP_06987820.1| peptide chain release factor 2, programmed [Bacteroides sp. 3_1_19] gi|301312251|ref|ZP_07218168.1| peptide chain release factor 2, programmed [Bacteroides sp. 20_3] gi|298265316|gb|EFI06979.1| peptide chain release factor 2, programmed [Bacteroides sp. 3_1_19] gi|300829673|gb|EFK60326.1| peptide chain release factor 2, programmed [Bacteroides sp. 20_3] Length = 322 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 123/315 (39%), Positives = 187/315 (59%), Gaps = 11/315 (3%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 M++ + L I E+ + + E ++ +E ++ +E +F Sbjct: 1 MKKVKELKKWIELYGEVHAAAEELELAYEYVK--EEIITEEEVDAAYKKALHLLEDLEFR 58 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 ++L EAD L++++GAGGTESQDWA+ML+RMY RWAE +K +G+EAGI Sbjct: 59 NMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYQRWAENNGYKISIANYQEGDEAGI 118 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K+ T+ I+G AYG+LK E GVHRLVR+SPY++ +R TSF+S++V P+VDD+IE+++ Sbjct: 119 KTVTIDIEGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVKVEA 178 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAW 277 + DT+R+ GAGGQ+VN +S VR+ + ++++ + R Q KN+ A Sbjct: 179 AAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAM 238 Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 LR+ LY+ ELQ R E+ K +I WG QIRSYV + VKD RTN + + + Sbjct: 239 RQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNG 297 Query: 338 VLDGDLDDFMKATLA 352 V+DG +DDF+KA L Sbjct: 298 VMDGKIDDFIKAYLM 312 >gi|87309295|ref|ZP_01091431.1| peptide chain release factor 1 [Blastopirellula marina DSM 3645] gi|87287934|gb|EAQ79832.1| peptide chain release factor 1 [Blastopirellula marina DSM 3645] Length = 358 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 99/346 (28%), Positives = 162/346 (46%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + R FL + DP + N + + RE L + + ++ + + EL Sbjct: 5 LEEKLSRFEFLEKQMSDPDVMGNSHQMATIAREHGSLAKLATKYRTFKNTIDEMGEAKEL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS---GEADSNDAYLEVHAGAGGTESQD 132 +D+ +D + + Q ++ +A+ LE+ GAGG E+ Sbjct: 65 LESDDEEMCELAAADIVTLKAKREKLWQELLDMTIGGDDANRTRIVLEIRGGAGGDEAAL 124 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L MY R+AE +K+K E +E + E G K + ++G Y L+ E G HR+ R Sbjct: 125 FARDLYEMYKRYAETKKWKYEVMEANPTELGGFKEVIISVEGEGVYRELQYESGGHRVQR 184 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ V P +D E +SG GGQHVN T SAVR+ Sbjct: 185 VPETEAKGRVHTSAATVAVMPEPEDVEFELNPEDYEVERYAASSGPGGQHVNKTASAVRL 244 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311 H GV+VQC +ERSQHKN A+A +L+ KLY E+++ EE + K+ +G G + Sbjct: 245 IHKD-GVIVQCCEERSQHKNLAKALRLLKTKLY--EVKRAEEEKQRSDHRKSLVGSGDRS 301 Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ ++ G + + + + Sbjct: 302 QRIRTYNF-PENRVTDHRINLTLYKLDQIIAGAIQPVIDGLVDYDR 346 >gi|47459025|ref|YP_015887.1| peptide chain release factor 1 [Mycoplasma mobile 163K] gi|61214626|sp|Q6KIA0|RF1_MYCMO RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|47458353|gb|AAT27676.1| peptide chain release factor 1 [Mycoplasma mobile 163K] Length = 358 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 107/343 (31%), Positives = 173/343 (50%), Gaps = 5/343 (1%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72 + ++ K P ++ N+ E + +E + + + + + D IL Sbjct: 9 LKSIKEKYDSNEKKLLLPEVFNNIKEYTKISKENNSISEIVENFNKFLINEQTIKDAKIL 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L+ EE E + + + + L E D + +E+ AGG E+ Sbjct: 69 LDEKDEEMVSFAKNEIHKSELENQELEKKLRILILPKDENDERNVIIEIRGAAGGDEANI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A LL+MY +WA+ K K + L+ + G T L++G AY LK E GVHR+ R Sbjct: 129 FAGDLLKMYNKWADINKMKLKLLDYANASSGGFSQVTFLVEGDKAYSKLKFESGVHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 I ++ R HTS +++ V P VDD E+EI+ D +IDT+R+SG GGQ VNTTDSAVRI Sbjct: 189 IPVTETQGRVHTSTTTVTVMPEVDDVAEVEINPVDLKIDTFRSSGPGGQSVNTTDSAVRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 TH+P+G+VV Q E+SQ N+ A +L++KLY+LE++KR E +I Sbjct: 249 THLPSGIVVSSQDEKSQISNRESALKILKSKLYDLEIKKRNEETGKFRKLAGSGARSEKI 308 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R+Y P + D R + ++G +++ ++A A ++ Sbjct: 309 RTYNY-PQDRITDHRIGFSTS-LKIAMEGKINNIIEALHAEEQ 349 >gi|317487895|ref|ZP_07946487.1| peptide chain release factor 1 [Eggerthella sp. 1_3_56FAA] gi|325830623|ref|ZP_08164044.1| peptide chain release factor 1 [Eggerthella sp. HGA1] gi|316913021|gb|EFV34538.1| peptide chain release factor 1 [Eggerthella sp. 1_3_56FAA] gi|325487369|gb|EGC89811.1| peptide chain release factor 1 [Eggerthella sp. HGA1] Length = 357 Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats. Identities = 117/346 (33%), Positives = 173/346 (50%), Gaps = 12/346 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ + K DP + + E L +E + +E D E+ Sbjct: 10 LTKIIEAYEDVQAKMGDPAVLADQKEYNRLAKEYANQGPLAKKAREYVQAADDLAEAREM 69 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D E ++ E +F + + AD D +E+ A AGG E+ +A Sbjct: 70 LADPDMKEFALEEIAGIEAKLPALEEDIKFMLIPADPADDKDIIVEIRAAAGGDEAAIFA 129 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L +MY R+A + +KTE +++ E G K +KG + Y +K E GVHR+ R+ Sbjct: 130 GELYKMYERFASAQGWKTETMDMSASEAGGFKEIQFKVKGDHVYSVMKFESGVHRVQRVP 189 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P D +E+EI+E+D RID YRA G GGQ VNTTDSAVRITH Sbjct: 190 KTESQGRIHTSTATVAVLP-EADEVEVEINENDLRIDVYRAGGPGGQCVNTTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +P+G+VVQ Q ++SQ +NK A +LRA+LYE L +++ A G +IG G + Sbjct: 249 LPSGLVVQSQDQKSQLQNKIAAMAVLRARLYEKMLAEQQ--AAEGAKRLAQIGSGDRSEK 306 Query: 312 IRSYVLQPYQMVKDLRTNIE-KTSPSDVLDGD-LDDFMKATLAIKK 355 IR+Y P V D R + VL GD L D + A A + Sbjct: 307 IRTYN-GPQDRVTDHRIGFNGTYN--GVLLGDGLGDVITALQAADR 349 >gi|307636767|gb|ADN79217.1| peptide chain release factor 1 [Helicobacter pylori 908] gi|325995353|gb|ADZ50758.1| Peptide chain release factor 1 [Helicobacter pylori 2018] gi|325996950|gb|ADZ49158.1| Peptide chain release factor 1 [Helicobacter pylori 2017] Length = 352 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 102/345 (29%), Positives = 174/345 (50%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R L + ++ L +E+ ++ KE L EL Sbjct: 8 LSSILRRYDELTALLSSAEVVSDIKRLTELSKEQSSIEEISVASKEYLSVLEGIKENKEL 67 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ + +E L+ K + + D + YLE+ AG GG E+ + Sbjct: 68 LEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L + Y R+A+ +K+K E + + G K +LIKG Y LK E G HR+ R+ Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P D +E+ ++ SD +I+ +RA G GGQ VNTTDSAVRITH Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PT + V Q E+SQHKNK +A +L+A+LYE ++++++ + K ++G G + Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + + R N+ S +++ G+LD+ + +A + Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348 >gi|15828576|ref|NP_325936.1| peptide chain release factor 1 [Mycoplasma pulmonis UAB CTIP] gi|20139344|sp|Q98RA5|RF1_MYCPU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|14089518|emb|CAC13278.1| PEPTIDE CHAIN RELEASE FACTOR 1 (RF-1) [Mycoplasma pulmonis] Length = 359 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 107/344 (31%), Positives = 165/344 (47%), Gaps = 6/344 (1%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + + LN + P + ++ K RE + + + + + Sbjct: 9 LKSILDKYQELNQELLKPEVLSDIKLYKKFSRELNSIKSISEEFSKYLNYEKTIESSKII 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 +E D ++ + + ++ E + L + D D +E+ AGG E+ Sbjct: 69 LAQEKDEELISLAKKEILECEEKMSSLVEELKILLLPKDKNDELDVIMEIRGAAGGDEAN 128 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MY++WA K L+ + G I G AY LK E GVHR+ Sbjct: 129 IFAGDLFEMYSKWANNNNMKVSVLDRNYATSGGFTLIVFTISGEKAYSKLKFESGVHRVQ 188 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS +++ P +DD IE+EI+ SD +IDT+R+SGAGGQ VNTTDSAVR Sbjct: 189 RIPVTESKGRVHTSTATVTAMPEIDDDIEVEINPSDLKIDTFRSSGAGGQSVNTTDSAVR 248 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 ITHIPTG++ Q+ RSQ N+ A +L+AKLY+ E QK+ E + Sbjct: 249 ITHIPTGIISSSQEGRSQISNRELALKILKAKLYDHENQKKLEKVGQYRKLAGSGARSEK 308 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N +S +++G L + + LA ++ Sbjct: 309 IRTYNY-PQDRVTDHRINF-SSSLKQIMEGKLQIIIDSLLAEEQ 350 >gi|254796771|ref|YP_003081607.1| peptide chain release factor 1 [Neorickettsia risticii str. Illinois] gi|254590013|gb|ACT69375.1| peptide chain release factor 1 [Neorickettsia risticii str. Illinois] Length = 367 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 115/346 (33%), Positives = 181/346 (52%), Gaps = 14/346 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + R ++L + P + L +E L + I + + L L Sbjct: 8 LEEILNRHTYLADRLRCPETIPSQE-FSKLSKEYAELKPKVELITRYKKLKEEQAYLELL 66 Query: 76 ALEE-DDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTES 130 +D I + +LQ I+ V +FE + D+ + LEV AG GG E+ Sbjct: 67 VKNPLEDQEIREIGKSDLQAIQDVVPKLEFEIRRMLLPKDKDDALNVMLEVRAGTGGDEA 126 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L MY ++AE+ K++ E + I E G K A I G + LK E GVHR+ Sbjct: 127 ALFAASLFHMYQKYAERMKWRFEIISISHNEIGGYKEANASISGSEVFAKLKFESGVHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P + ++++I++ D RID YR+SG GGQ VNTTDSAV Sbjct: 187 QRVPETESAGRIHTSTATVAVLP-EPEDVDVKINDKDLRIDVYRSSGPGGQSVNTTDSAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 R+THIPTG+VV Q E+SQHKN+A+A +L+ +LYE+E K ++ I K++IG G Sbjct: 246 RVTHIPTGIVVIQQDEKSQHKNRAKAMKVLKVRLYEIERNKVQQE--ISSMRKSQIGSGE 303 Query: 311 Q---IRSYVLQPYQMVKDLRTNIEKTSPSD-VLDGDLDDFMKATLA 352 + R+Y P + D R N+ ++ V +G+L+ ++A + Sbjct: 304 RSEKTRTYNF-PQGRITDHRINLTTYRINETVKEGELEPIIEALIR 348 >gi|203287654|ref|YP_002222669.1| peptide chain release factor A [Borrelia recurrentis A1] gi|201084874|gb|ACH94448.1| peptide chain release factor A [Borrelia recurrentis A1] Length = 359 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 124/342 (36%), Positives = 187/342 (54%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +++ L K +D +L +N E +++E +L+ E Q L ++ Sbjct: 8 LNPIEKKIKILEEKLQDVNLIKNQKEYSKIIKEYNYLEKIKEKKDEYQHILNQINENQKI 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 EED+ + + + + + + L E D + +E+ AG GG E+ Sbjct: 68 LSEEDNLEMKDLIKQEIAHLYSKKDEIENTIKILLLHQDENDDKNIIIEIRAGTGGEEAA 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A+ L MYT+++EK+K+KTE + + E G K + IKG + + LK E GVHR+ Sbjct: 128 LFAHNLYEMYTKYSEKKKWKTELINFNKTELGGFKEVSFEIKGKDVFKKLKHESGVHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +SN + TS +++ V P V+D+ I++ D R D YR+SGAGGQHVNTTDSAVR Sbjct: 188 RIPITESNGKLQTSAATVAVLPEVEDTDIE-INDKDLRTDVYRSSGAGGQHVNTTDSAVR 246 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+V QCQ ERSQHKNK QA +LRA+LYELE K++E K ++G G Sbjct: 247 ITHLPTGIVAQCQNERSQHKNKEQAMKILRARLYELENLKKQE--QRSNDRKQQVGSGDR 304 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P V D R NI +++ G+LD + Sbjct: 305 SERIRTYNF-PQNRVTDHRANISLYKLEEIMQGELDSLLNTL 345 >gi|15611143|ref|NP_222794.1| peptide chain release factor 1 [Helicobacter pylori J99] gi|7388059|sp|Q9ZMZ0|RF1_HELPJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|4154581|gb|AAD05656.1| PEPTIDE CHAIN RELEASE FACTOR 1 [Helicobacter pylori J99] Length = 352 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 103/345 (29%), Positives = 175/345 (50%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R L + ++ + L +E+ ++ KE L EL Sbjct: 8 LSSILKRYDELTALLSSVEVVSDIKKLTELSKEQSSIEEISVASKEYLSVLEGIKENKEL 67 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ + +E L+ K + + D + YLE+ AG GG E+ + Sbjct: 68 LEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L + Y R+A+ +K+K E + + G K +LIKG Y LK E G HR+ R+ Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PT + V Q E+SQHKNK +A +L+A+LYE ++++++ + K ++G G + Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + + R N+ S +++ G+LD+ + +A + Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348 >gi|300868546|ref|ZP_07113164.1| peptide chain release factor 2 [Oscillatoria sp. PCC 6506] gi|300333459|emb|CBN58356.1| peptide chain release factor 2 [Oscillatoria sp. PCC 6506] Length = 291 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 126/255 (49%), Positives = 181/255 (70%) Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159 + + + LLSG D+ A L ++AGAGGT++QDWA MLLRMYTRW E++ +K EI + Sbjct: 28 DQWELQQLLSGPYDAGGAVLTINAGAGGTDAQDWAEMLLRMYTRWGERQGYKVHLAEISE 87 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 G+EAG+KSATL I G AYG+L+ E+G HRLVRISP+++N +R TSF+ + V P++D S+ Sbjct: 88 GDEAGLKSATLEIVGRYAYGYLRSEKGTHRLVRISPFNANDKRQTSFAGVEVMPILDRSV 147 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 E++I E D + T RA G GGQ+VN ++AVRI H+PTG+ V+C +ERSQ +NK +A + Sbjct: 148 ELDIPEKDLEVTTSRAGGKGGQNVNKVETAVRIVHLPTGLAVRCTEERSQLQNKEKALVL 207 Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 L+AKL + ++R + E WG QIR+YV PYQMVKDLRT +E T+ +DV+ Sbjct: 208 LKAKLLVVAREQRAKEIAEIRGDMVEAAWGNQIRNYVFHPYQMVKDLRTGVETTAIADVM 267 Query: 340 DGDLDDFMKATLAIK 354 +G+L+ F++A L + Sbjct: 268 NGELEPFIQAYLRQE 282 >gi|217033144|ref|ZP_03438604.1| hypothetical protein HPB128_185g4 [Helicobacter pylori B128] gi|298736978|ref|YP_003729508.1| peptide chain release factor RF-1 [Helicobacter pylori B8] gi|216945129|gb|EEC23827.1| hypothetical protein HPB128_185g4 [Helicobacter pylori B128] gi|298356172|emb|CBI67044.1| peptide chain release factor RF-1 [Helicobacter pylori B8] Length = 352 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 104/345 (30%), Positives = 176/345 (51%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R L + ++ + L +E+ ++ KE L EL Sbjct: 8 LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLEGIKENKEL 67 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ + +E L+ K ++E + + D + YLE+ AG GG E+ + Sbjct: 68 LEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L + Y R+A+ +K+K E + + G K LIKG Y LK E G HR+ R+ Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PT + V Q E+SQHKNK +A +L+A+LYE ++++++ + K ++G G + Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + + R N+ S +++ G LD+ + +A + Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGSLDEVINPLIAHAQ 348 >gi|194477029|ref|YP_002049208.1| peptide chain release factor 1 [Paulinella chromatophora] gi|171192036|gb|ACB42998.1| peptide chain release factor 1 [Paulinella chromatophora] Length = 366 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 101/348 (29%), Positives = 168/348 (48%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + A + L + DP + N + + RE L+ + K ++ + L Sbjct: 10 LETATRTFENLERQLADPDVAVNPDQLQKFAREHSRLEPIVIDSKALKQAQKQREEAILL 69 Query: 76 ALEEDDCSILQETSDN-----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + ++ ++ + I+ + L D LE+ +G GG E+ Sbjct: 70 LREHRNDPEMEALANEEIGALDEVIERLTKQLTLALLPRDSRDERSVMLEIRSGTGGGEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY R+++ ++ +AL + E G + L I+G Y LK E GVHR+ Sbjct: 130 CIWAGDLARMYERYSQSVGWQVQALSSSEAELGGFRELILAIRGEGVYSKLKYEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P D +E+++ D I T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADKVEVQLDPKDIEISTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ V C QERSQ +N+ +A +LRAKL LE Q E A + K ++G G Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERALEILRAKL--LERQLAEAAAAESSARKAQVGTGD 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + D R + S +L+G+L++ + +A+ + Sbjct: 307 RSEKIRTYNYKD-NRTTDHRLG-QNFSLDSILNGNLEEIIDTCIALDQ 352 >gi|12045113|ref|NP_072924.1| peptide chain release factor 1 [Mycoplasma genitalium G37] gi|255660257|ref|ZP_05405666.1| peptide chain release factor 1 [Mycoplasma genitalium G37] gi|1350577|sp|P47500|RF1_MYCGE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|1045950|gb|AAC71478.1| peptide chain release factor 1 [Mycoplasma genitalium G37] gi|166078949|gb|ABY79567.1| peptide chain release factor 1 [synthetic Mycoplasma genitalium JCVI-1.0] Length = 359 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 113/350 (32%), Positives = 180/350 (51%), Gaps = 14/350 (4%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 F+ + V+ L P+L + + K++ +E +H I KE+Q + + Sbjct: 8 FFNVEKIVELTEQLEKDLNKPNL--SFEQIKVINKELKHKQPLIVKFKELQKLVENANEA 65 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGT 128 ++ + +E L++IK + + F L E + + +E+ AGG Sbjct: 66 EQILNNSSLKELHEEAKKELEKIKASLPSLEEEIKFLLLPVDENNQKNVIVEIRPAAGGD 125 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 ES + + L MY + + + E EI GI + + G + + LK E GVH Sbjct: 126 ESCIFLSDLFNMYKNYCTSKNWTVELNEIIPASV-GINFVSFAVNGTDVFAKLKFESGVH 184 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ ++ R HTS ++ V P +++ +EI I+ SD RIDTYRASGAGGQHVN T+S Sbjct: 185 RVQRVPLTEAKGRVHTSTVTVAVLPQLEE-VEITINPSDLRIDTYRASGAGGQHVNRTES 243 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITH+PTG+VV CQ+ +SQ N+ +A MLRAKL+E K+ K+++G Sbjct: 244 AVRITHLPTGIVVACQEGKSQFSNRDKAMKMLRAKLWENAQNKQLSTQADL--RKSQVGS 301 Query: 309 GRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G + IR+Y P + D R + + V+ GDLD+ ++A A +K Sbjct: 302 GERAEKIRTYNY-PQNRITDHRIKLTINKLNTVILGDLDEIIEALQADEK 350 >gi|269957243|ref|YP_003327032.1| peptide chain release factor 1 [Xylanimonas cellulosilytica DSM 15894] gi|269305924|gb|ACZ31474.1| peptide chain release factor 1 [Xylanimonas cellulosilytica DSM 15894] Length = 366 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 111/346 (32%), Positives = 164/346 (47%), Gaps = 11/346 (3%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + + + DP + + A+ L R L+ + + D EL Sbjct: 12 LLAEHAEIERALADPAVHADAGRARTLGRRYAELNQVVGAYRAWAAARDDAEAAAELLEL 71 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTESQDWANM 136 D + + +L D LE+ AG GG ES +A Sbjct: 72 SDGLEEELAAELPGLQAAEADAAEHLRRVLVPRDPDDGRDVILEIKAGEGGEESALFAGD 131 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHR 189 LLRMY R+AE++ + T+ LE D + G K + I G + LK E GVHR Sbjct: 132 LLRMYLRYAERKGWSTQVLEATDTDLGGYKDVQVAIKARSVNDPGDGVWAHLKYEGGVHR 191 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ ++ R HTS + + V+P VDD E+EI +D RID YR+SG GGQ VNTTDSA Sbjct: 192 VQRVPVTETQGRIHTSAAGVLVFPEVDDPGEVEIDPNDLRIDVYRSSGPGGQSVNTTDSA 251 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308 VRITH+PTG+VV Q E+SQ +NK QA +LRA+L + ++ A S+ + Sbjct: 252 VRITHLPTGIVVSMQNEKSQLQNKEQAMRVLRARLLAAQQEEAAAQAADLRRSQVRTVDR 311 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RT + + VL GDL+ +++ + Sbjct: 312 SERIRTYNF-PENRIADHRTGYKAYNLDAVLGGDLEPVVRSAIEAD 356 >gi|210134282|ref|YP_002300721.1| peptide chain release factor 1 [Helicobacter pylori P12] gi|238058714|sp|B6JPI0|RF1_HELP2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|210132250|gb|ACJ07241.1| peptide chain release factor RF-1 [Helicobacter pylori P12] Length = 352 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 103/345 (29%), Positives = 173/345 (50%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R L + ++ + L +E+ ++ KE L EL Sbjct: 8 LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLEGIKENKEL 67 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ + +E L+ K + + D + YLE+ AG GG E+ + Sbjct: 68 LEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L + Y R+A+ +K+K E + + G K LIKG Y LK E G HR+ R+ Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PT + V Q E+SQHKNK +A +L+A+LYE ++++++ + K ++G G + Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + + R N+ S +++ G LD+ + +A + Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGSLDEVINPLIAHAQ 348 >gi|191166656|ref|ZP_03028484.1| peptide chain release factor 1 [Escherichia coli B7A] gi|190903305|gb|EDV63026.1| peptide chain release factor 1 [Escherichia coli B7A] Length = 321 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 109/310 (35%), Positives = 169/310 (54%), Gaps = 7/310 (2%) Query: 50 QHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN-LQRIKLEVEYKQFESLL 108 L + + Q D + + + + Q+ ++ + + Q L Sbjct: 4 ASLSDVSRCFTDWQQVQEDIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLP 63 Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + +GE G K Sbjct: 64 KDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEI 123 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 I G YG LK E G HR+ R+ +S R HTS ++ V P + D+ +I+ +D Sbjct: 124 IAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADL 183 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E Sbjct: 184 RIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAE 243 Query: 289 LQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345 + KR++ + + +G G + R+Y P V D R N+ +V++G LD Sbjct: 244 MAKRQQ--AEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDM 300 Query: 346 FMKATLAIKK 355 ++ + + Sbjct: 301 LIEPIIQEHQ 310 >gi|316932075|ref|YP_004107057.1| peptide chain release factor 1 [Rhodopseudomonas palustris DX-1] gi|315599789|gb|ADU42324.1| peptide chain release factor 1 [Rhodopseudomonas palustris DX-1] Length = 361 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 101/349 (28%), Positives = 170/349 (48%), Gaps = 16/349 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + + L + ++ + RE L+ + +K + + + EL Sbjct: 9 LDVLLAHHAALEAQLMAQVGAED---YVRITRELSELNPLVEAVKSYRQVRDELGEIDEL 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130 + ++ ++ + + + + D + LE+ AG GG E+ Sbjct: 66 LEDPATEPEMRAMAEAERDALDAHRDELIQQIRIALLPKDAMDERNVMLEIRAGTGGDEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY ++A + + E + +G G K +KG A+ LK E GVHR+ Sbjct: 126 SLFAGDLFRMYEKFAALQGWSVEVISASEGTVGGFKEIIAEVKGRGAFAKLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + ++++I + D RI+T RA GAGGQHVN T+SA+ Sbjct: 186 QRVPDTETQGRIHTSAATVAVLP-EVEDVDVDIKQEDLRIETMRAQGAGGQHVNKTESAI 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+VV Q RSQHKN+A A N+LR+++Y+ E Q+ + A K ++G G Sbjct: 245 RITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAERQRVD--AARSAERKEKVGSGD 302 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 +IR+Y P V D R N+ V+ G+ L + + A + Sbjct: 303 RSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGEALGELIDALTTEHQ 350 >gi|317011921|gb|ADU82529.1| peptide chain release factor 1 [Helicobacter pylori Lithuania75] Length = 352 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 103/342 (30%), Positives = 172/342 (50%), Gaps = 9/342 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++R L + ++ + L +E+ ++ KE L EL Sbjct: 8 LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLEGIKENKEL 67 Query: 76 ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ + +E L+ K + + D + YLE+ AG GG E+ + Sbjct: 68 LEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L + Y R+A+ +K+K E + + G K LIKG Y LK E G HR+ R+ Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PT + V Q E+SQHKNK +A +L+A+LYE ++++++ + K ++G G + Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352 IR+Y P + + R N+ S +++ G LD+ + +A Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGSLDEVINPLIA 345 >gi|162147699|ref|YP_001602160.1| peptide chain release factor 1 [Gluconacetobacter diazotrophicus PAl 5] gi|209542323|ref|YP_002274552.1| peptide chain release factor 1 [Gluconacetobacter diazotrophicus PAl 5] gi|189039975|sp|A9HJ50|RF1_GLUDA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|161786276|emb|CAP55858.1| putative peptide chain release factor 1 [Gluconacetobacter diazotrophicus PAl 5] gi|209530000|gb|ACI49937.1| peptide chain release factor 1 [Gluconacetobacter diazotrophicus PAl 5] Length = 352 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 115/344 (33%), Positives = 170/344 (49%), Gaps = 11/344 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ-DRLCDNLILLE 74 D V R L + + RE L+ + I E++ + Sbjct: 7 LDRIVARSEELQAALAEGLV---GEAFAKASREYAELEPIVDRIGELRLAEQEERQSQAL 63 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 LA E E D RI + + + L EAD A LE+ AGG E+ +A Sbjct: 64 LADPEMRELAEAELEDLRARIPVLRQDIRIAMLPRDEADERSAILEIRPAAGGDEAALFA 123 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L Y R+A R ++ E +E + E G++ I G + LK E GVHR+ R+ Sbjct: 124 AELFDAYRRYAALRGWRFEIMEFDESELGGLREGIANITGRGVFARLKYESGVHRVQRVP 183 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P ++++I++ D RID YRASGAGGQHVN T+SAVRITH Sbjct: 184 ATESQGRIHTSTVTVAVLP-EAGDVDVQINDGDLRIDVYRASGAGGQHVNKTESAVRITH 242 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV Q+E+SQHKN+A+A +L A+LY E ++ A K+++G G + Sbjct: 243 LPTGLVVAMQEEKSQHKNRAKAMKILMARLY--ERERAAAHATRAADRKSQVGTGDRSER 300 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ V+ G+ D+F+ A ++ Sbjct: 301 IRTYNF-PQGRVTDHRINLTAYKIDRVMMGEFDEFVDALTQDEQ 343 >gi|297182760|gb|ADI18914.1| protein chain release factor a [uncultured SAR11 cluster bacterium HF0010_09O16] Length = 356 Score = 193 bits (491), Expect = 3e-47, Method: Composition-based stats. Identities = 109/344 (31%), Positives = 179/344 (52%), Gaps = 15/344 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + R S L ++ + +E L+ ++ K+ D + L ++ Sbjct: 7 IEELISRHSSLEKDLASGNV--DKKLFAEKSKEYSDLNEIVNSAKKYASYKNDKIELEKI 64 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +++ E S+ + + + + L EAD +A +E+ AG GG E+ Sbjct: 65 LNDKNSDEELMKMAHTELSELNSQFEQNEKKLKLFLLPKDEADKKNAIIEIRAGTGGLEA 124 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L +MY + K+K+ E + I + G+K IKG N Y LK E GVHR+ Sbjct: 125 SLFAGDLFKMYEKVCNKKKWSLELISISRSDAGGLKEVIASIKGNNIYSTLKYESGVHRV 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + ++++I+E+D RID +RA G GGQ VNTTDSAV Sbjct: 185 QRVPDTETQGRVHTSAATVAVLP-EAEEVDLKINETDLRIDVFRAGGPGGQSVNTTDSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+P+G+ V Q E+SQHKNKA+ +LRA+LYELE + ++ K++IG G Sbjct: 244 RITHLPSGLSVSQQDEKSQHKNKAKGMKILRARLYELERTRIDQER--SADRKSKIGTGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350 +IR+Y P V D R N+ + L+G+ D+ +++ Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLHKLEEFLEGEAFDEIIESL 344 >gi|330863233|emb|CBX73359.1| peptide chain release factor 1 [Yersinia enterocolitica W22703] Length = 330 Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 108/312 (34%), Positives = 163/312 (52%), Gaps = 7/312 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D ++ + + L RE L + KE + D + Sbjct: 9 LEALQERHEEVLAHLGDANVIADQDRFRALSREYAQLTDVTRCFKEWRSVQDDIEAAEMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ R + + Q L D D +LE+ AG GG E+ +A Sbjct: 69 LDDPEMREMAQDELKEAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 + RMY+R+AE R++K E + +GE G K + G +G LK E G HR+ R+ Sbjct: 129 GDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGDGVFGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ EI+ D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR++ + +G G + Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQQ--AEASERRNLLGSGDRSDR 306 Query: 312 IRSYVLQPYQMV 323 R+Y P V Sbjct: 307 NRTYNF-PQGRV 317 >gi|187918069|ref|YP_001883632.1| peptide chain release factor 1 [Borrelia hermsii DAH] gi|238689283|sp|B2RZQ6|RF1_BORHD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119860917|gb|AAX16712.1| bacterial peptide chain release factor 1 [Borrelia hermsii DAH] Length = 357 Score = 193 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 127/339 (37%), Positives = 191/339 (56%), Gaps = 11/339 (3%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 ++ L K +D +L +N E ++E +L+ + E ++ L ++ E Sbjct: 9 IESKIKILEEKLQDINLVKNQKEYAKTVKEYNYLEKIKAKKDEYENILSQINENQKILSE 68 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 E++ + + L + L+ + + L E DS + +E+ AG GG E+ +A Sbjct: 69 EENLEMKELVKQELAHLNLKKDEVEHMIKILLLHQDENDSKNIIIEIRAGTGGEEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 + L MYT+++EK+K+KTE + ++ E G K + IKG + + LK E GVHR+ R+ Sbjct: 129 HNLYEMYTKYSEKKKWKTELINFNETELGGFKEVSFEIKGKDVFKKLKHESGVHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +SN R TS +++ V P V+D+ I+E D RID YR+SGAGGQHVNTTDSAVRITH Sbjct: 189 ITESNGRLQTSAATVAVLPEVEDTDIE-INEKDLRIDVYRSSGAGGQHVNTTDSAVRITH 247 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VVQCQ ERSQHKNK QA +LRA+LYE E K++E K ++G G + Sbjct: 248 LPTGIVVQCQNERSQHKNKDQAMKILRARLYEFENLKKQE--QRSNDRKQQVGSGDRSER 305 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 IR+Y P V D R NI +++ G+LD + Sbjct: 306 IRTYNF-PQNRVTDHRANISLYKLEEIMQGELDFLLDTL 343 >gi|295707229|ref|YP_003600304.1| peptide chain release factor 1 [Bacillus megaterium DSM 319] gi|294804888|gb|ADF41954.1| peptide chain release factor 1 [Bacillus megaterium DSM 319] Length = 325 Score = 193 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 100/321 (31%), Positives = 161/321 (50%), Gaps = 11/321 (3%) Query: 42 AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN----LQRIKL 97 + +E+ + ++ +E +D + ++ D + + + + Sbjct: 1 MREYSKEQSDIQQTVAAYQEYKDVKEQLSEAKTMLEDKLDADMRDMVKEEIAELETQQEE 60 Query: 98 EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157 VE + + D + +EV AGG E+ +A L RMY+R+AE + +KTE +E Sbjct: 61 LVEKLRILLIPKDPNDDKNVIMEVRGAAGGDEAALFAANLYRMYSRFAESQGWKTEVMEA 120 Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217 G K +I G AY +K E G HR+ R+ +S R HTS +++ P + Sbjct: 121 TTTGVGGYKEIIFMINGKGAYSKMKFENGAHRVQRVPETESGGRIHTSTATVACLP-EAE 179 Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 +E++I E D R+DT+ +SG GGQ VNTT SAVR+TH+PT VV CQ E+SQ KNK +A Sbjct: 180 EVEVDIHEKDIRVDTFASSGPGGQSVNTTMSAVRLTHLPTNTVVSCQDEKSQIKNKEKAM 239 Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTS 334 +LRA++Y+ +RE A + K +G G +IR+Y P V D R + Sbjct: 240 KVLRARVYDKF--QREAQAEYDATRKQAVGSGDRSERIRTYNF-PQNRVTDHRIGLTIQK 296 Query: 335 PSDVLDGDLDDFMKATLAIKK 355 +L+G LD+ + A + + Sbjct: 297 LDQILEGKLDEIIDALVMEDQ 317 >gi|159475365|ref|XP_001695789.1| peptide chain release factor [Chlamydomonas reinhardtii] gi|158275349|gb|EDP01126.1| peptide chain release factor [Chlamydomonas reinhardtii] Length = 383 Score = 193 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 100/342 (29%), Positives = 174/342 (50%), Gaps = 14/342 (4%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 L + DP + + E + + + L+ ++ + QD + EE Sbjct: 34 FKELQMRMADPEVAASATEFQKVAKAASDLETTVNTYRAYQDTEQQLADAQKYLKEEASS 93 Query: 83 SILQETSDNLQRIK------LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 + + + + + + D + LE+ AGAGG E+ WA Sbjct: 94 DPEMAEFAREEIAELEASLTKLQDALRLQLVPRDPLDDRNIMLEIRAGAGGDEASIWAGD 153 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L+RMY R+A K+ +K + E G K L I G + Y LK E GVHR+ R+ Sbjct: 154 LMRMYQRYANKQGWKASLVSCTQAEAGGYKEIILQINGDSVYSKLKWEAGVHRVQRVPAT 213 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 ++ R HTS +++ V P + +++ ++ +D + RASGAGGQ+VN ++AV + H P Sbjct: 214 EAAGRVHTSTATVAVMP-EVEEVDVALNMNDIDLKFARASGAGGQNVNKVETAVDLMHKP 272 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG+ V CQ+ER+Q +NK +A+ +LRAKLYELELQ+++ I + K+++G G +I+ Sbjct: 273 TGIRVFCQEERTQAQNKERAFQILRAKLYELELQRQQAE--IYAARKSQVGTGDRSEKIK 330 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +Y + V D R + + +++GDL+D ++A ++ + Sbjct: 331 TYNYKD-SRVSDHRIKM-NFDLNSIIEGDLEDTLQAMISADQ 370 >gi|299132853|ref|ZP_07026048.1| peptide chain release factor 1 [Afipia sp. 1NLS2] gi|298592990|gb|EFI53190.1| peptide chain release factor 1 [Afipia sp. 1NLS2] Length = 358 Score = 193 bits (489), Expect = 5e-47, Method: Composition-based stats. Identities = 106/349 (30%), Positives = 171/349 (48%), Gaps = 16/349 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72 D + R + L + + RE + + +K + + D + Sbjct: 7 LDILLARHAALEAELMAQ---VSAETYVRATRELAEISPVVEAVKAYRAGASEIADLEAM 63 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTES 130 + + D + E+ + + E +Q L + + LE+ AG GG E+ Sbjct: 64 IADPATDADMRAMAESERPVLLERQESLEQQIRVALLPKDAMDERNVVLEIRAGTGGDEA 123 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A + +K E + +G G K ++G A+ LK E GVHR+ Sbjct: 124 SLFAGDLFRMYERFAALQGWKVEVMSASEGTMGGYKEIVAEVQGRGAFAKLKFESGVHRV 183 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +++ R HTS +++ V P + ++I+I +SD RI+T RA GAGGQHVN T+SA+ Sbjct: 184 QRVPDTEASGRIHTSAATVAVLP-EAEDVDIDIKDSDLRIETMRAQGAGGQHVNKTESAI 242 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG+VV Q RSQHKN+A A N+LR+++ + E Q+ A + ++G G Sbjct: 243 RITHIPTGIVVMMQDSRSQHKNRASAMNILRSRVLDGERQR--AAAERSADRRGQVGSGD 300 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 +IR+Y P V D R N+ V+ G+ L + + A + Sbjct: 301 RSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGEALGELVDALTTEHQ 348 >gi|284046083|ref|YP_003396423.1| peptide chain release factor 1 [Conexibacter woesei DSM 14684] gi|283950304|gb|ADB53048.1| peptide chain release factor 1 [Conexibacter woesei DSM 14684] Length = 349 Score = 193 bits (489), Expect = 5e-47, Method: Composition-based stats. Identities = 113/342 (33%), Positives = 173/342 (50%), Gaps = 14/342 (4%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL-A 76 R L + DP + + R+ + L+ A E + + D EL Sbjct: 8 QVESRFQELEAQMSDPEVIGDRQRYAETGRQYRDLEEAARLAAEWRRAVDDEAGARELLE 67 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 DD + + +RI E + + AD + +E+ GAGG E+ +A Sbjct: 68 EGGDDAEVRDMLARARERIDALDEEIRLAMVEKDPADEKNVIVEIRPGAGGDEAGLFAGD 127 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L RM TR+AE+R FKTEAL DG T +KG AY K E G HR+ R+ Sbjct: 128 LYRMLTRYAERRGFKTEALSESDG------QYTFAVKGEGAYSVFKFEGGTHRVQRVPET 181 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S R HTS +++ V P + +++E++++D ++D YR+SG GGQ VNTTDSAVRITH P Sbjct: 182 ESQGRIHTSTATVAVLP-EAEEVDVEVNDNDLQVDVYRSSGPGGQSVNTTDSAVRITHKP 240 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IR 313 +G+VV Q E+SQ +N+ +A +LRA+LYE L +++ + + ++G G + IR Sbjct: 241 SGIVVSMQDEKSQLQNRDKAMRVLRARLYEAALAEQQAE--LSATRLAQVGSGERAEKIR 298 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +Y P + D R + + L G+LDD A +K Sbjct: 299 TYNF-PQGRITDHRIKLTVHNLDAALAGELDDVTDALQDDEK 339 >gi|57504876|ref|ZP_00370851.1| peptide chain release factor 1 [Campylobacter coli RM2228] gi|305432416|ref|ZP_07401578.1| peptide chain release factor RF1 [Campylobacter coli JV20] gi|57019304|gb|EAL56006.1| peptide chain release factor 1 [Campylobacter coli RM2228] gi|304444455|gb|EFM37106.1| peptide chain release factor RF1 [Campylobacter coli JV20] Length = 355 Score = 193 bits (489), Expect = 5e-47, Method: Composition-based stats. Identities = 119/345 (34%), Positives = 186/345 (53%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R LN+ + ++ + L +E+++L+ + KE L L Sbjct: 6 LDPFLKRFEELNSLLSSSDIISDISKMTALSKEQKNLEPIVLKAKEYLKTLDSIEENKTL 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E NL+ +K ++E + L D + +LE+ AG GG E+ + Sbjct: 66 LNDAELGELAKEELKNLEELKPKLEEELKILLLPKDPNDERNIFLEIRAGTGGDEASLFV 125 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L++ Y R+AE R +K E + +G G K +L+KG A+ LK E G HR+ R+ Sbjct: 126 GDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGAGAFSRLKYEGGTHRVQRVP 185 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +I V P D IEIEI+ +D +ID R+SG GGQ VNTTDSAVRITH Sbjct: 186 QTESQGRIHTSAITIAVMP-EVDDIEIEINPNDLKIDVMRSSGHGGQSVNTTDSAVRITH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV Q +SQHKNK A +L+A+LY E+Q+ E +A E+ K+++G G + Sbjct: 245 LPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQESERLAQESEARKSQVGSGDRSER 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 IR+Y P + D R N+ +L DG D+ ++ +A + Sbjct: 303 IRTYNF-PQNRISDHRINLTLYRLDAILQDGLFDEVIEPLIAHYQ 346 >gi|323342350|ref|ZP_08082582.1| peptide chain release factor RF1 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463462|gb|EFY08656.1| peptide chain release factor RF1 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 359 Score = 193 bits (489), Expect = 5e-47, Method: Composition-based stats. Identities = 101/346 (29%), Positives = 169/346 (48%), Gaps = 10/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---DNLIL 72 + R + + + L +E+ + + ++ + + Sbjct: 10 LEKIQARDEEITEMMMSSEVLSDRKMMAKLGKEQSSMQQVLHAYRQFLEAEDFFTQAQEM 69 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L + E E+++ +++ +E + + +DS DA +E+ AGG E Sbjct: 70 LAVDEPELQELAAMESAEYSEKMVKIIEELEVLLVPKDPSDSFDAIVEIRGAAGGDEGNI 129 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMYTR+AE +K E +E D E G + ++KG + K E G HR+ R Sbjct: 130 FAGDLYRMYTRYAESLGYKYELIEAMDAEAGGYSLISFVVKGAEPFRHFKFESGAHRVQR 189 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +++ V + EI+I +D IDT R+SGAGGQHVN TDSAVRI Sbjct: 190 VPKTETQGRIHTSTATVLVLA-DVEDEEIDIDPNDLEIDTMRSSGAGGQHVNKTDSAVRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 H PTG+ V+CQ RSQH NK +A ++RA++YE ++ +E ++++G G Sbjct: 249 VHKPTGIAVKCQDGRSQHDNKDKAMRLVRARVYEEHQRRIQEER--HGERQSKVGTGARS 306 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + +++G LD+ + A L ++ Sbjct: 307 EKIRTYNY-PQNRVSDHRIGLTLQKLDIIMEGKLDEIVNALLEQEQ 351 >gi|27375329|ref|NP_766858.1| peptide chain release factor 1 [Bradyrhizobium japonicum USDA 110] gi|32171530|sp|Q89XT9|RF1_BRAJA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|27348465|dbj|BAC45483.1| peptide chain release factor 1 [Bradyrhizobium japonicum USDA 110] Length = 361 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 102/348 (29%), Positives = 165/348 (47%), Gaps = 24/348 (6%) Query: 16 WDNAVQRLSFLNT----KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 D + + L + + RE + I +K + + + Sbjct: 9 LDVLLAHHASLEAESLGQLAS-------ERYVQITRELAEITPLIEAVKTYRSAVKELAD 61 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAG 126 L + + ++ ++ + + + D + LE+ AG G Sbjct: 62 TEALIADPATDAEMRGMAEAERDELAPRIEDLVQKIRVALLPKDAMDDRNVVLEIRAGTG 121 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A L RMY R+A + +K E + +G G K ++G A+ LK E G Sbjct: 122 GDEASLFAGDLFRMYERFASLQGWKVEVISASEGTVGGYKEIIAEVQGRGAFSKLKFESG 181 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ ++ R HTS +++ V P + ++++I D RI+T RA GAGGQHVN T Sbjct: 182 VHRVQRVPDTETQGRIHTSAATVAVLP-EVEDVDVDIKNDDLRIETMRAQGAGGQHVNKT 240 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 +SA+RITHIPTG+VV Q RSQHKN+A A N+LR+++Y+ E Q+ + A K ++ Sbjct: 241 ESAIRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAERQRVD--AARSAERKEKV 298 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350 G G +IR+Y P V D R N+ V+ G+ L + + A Sbjct: 299 GSGDRSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGEALGELIDAL 345 >gi|307265645|ref|ZP_07547198.1| peptide chain release factor 1 [Thermoanaerobacter wiegelii Rt8.B1] gi|306919289|gb|EFN49510.1| peptide chain release factor 1 [Thermoanaerobacter wiegelii Rt8.B1] Length = 246 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 103/240 (42%), Positives = 153/240 (63%), Gaps = 7/240 (2%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +E+ AGAGG E+ +A+ L RMY+ +AEK+ +K E + ++ + G K L I G AY Sbjct: 1 MEIRAGAGGEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGAY 60 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 LK E GVHR+ R+ ++ R HTS +++ V P + +++EI+ SD +ID +R+ G Sbjct: 61 SRLKYESGVHRVQRVPTTEAGGRIHTSTATVAVLP-EVEEVDVEINPSDIKIDVFRSGGH 119 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTTDSAVR+THIPTG+VV CQ ERSQ +N+ +A +LRAKLYE+ LQ+++ I Sbjct: 120 GGQSVNTTDSAVRVTHIPTGIVVTCQDERSQIQNRERALKILRAKLYEMALQEQQ--REI 177 Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 E+ K+++G G +IR+Y P V D R + +VLDGDLD+ + A + + Sbjct: 178 AETRKSQVGTGERSERIRTYNF-PQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALILNDQ 236 >gi|319441088|ref|ZP_07990244.1| peptide chain release factor 1 [Corynebacterium variabile DSM 44702] Length = 361 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 114/348 (32%), Positives = 172/348 (49%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ + L + DP L + A+ + + L I + D+ E+ Sbjct: 11 VDDILSEYQGLEMQLSDPVLHNDAAAARRVAKRFSELQPVIQTYNRLTQAREDHEAAAEM 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A E+ + + + E DS+D +EV +GAGG E+ +A Sbjct: 71 ASEDAEFAAEADRLAAEIPALEEKLTDLL--APRDPHDSDDVVMEVKSGAGGEEAALFAG 128 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-----YGWLKGEQGVHRL 190 L+RMY R+AEK F E L+ ++ + G+K T+ I+ + K E GVHR+ Sbjct: 129 ELVRMYQRYAEKHGFTCEVLDTNETDLGGVKDLTMSIRSKQPTRDGAWSVFKFEGGVHRV 188 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 RI +S R TS + + VYP D+ +++I + D R+D YR+SG GGQ VNTTDSAV Sbjct: 189 QRIPVTESQGRIQTSAAGVLVYPEPDEVEDVQIDDKDLRVDVYRSSGKGGQGVNTTDSAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307 RITH+PTG+VV CQ+ERSQ +NKA+A +L A+L ++++ E A E +I Sbjct: 249 RITHLPTGIVVTCQKERSQIQNKARAMQVLAARL--QQMKEEEADAAAAEGRHAQIRTMD 306 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + + VLDGDL+ A + Sbjct: 307 RSERIRTYNF-PESRVSDHRIGYKANNLDAVLDGDLEALFGALHDADR 353 >gi|34557214|ref|NP_907029.1| peptide chain release factor 1 [Wolinella succinogenes DSM 1740] gi|46576699|sp|Q7M9M4|RF1_WOLSU RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|34482930|emb|CAE09929.1| PEPTIDE CHAIN RELEASE FACTOR 1 [Wolinella succinogenes] Length = 355 Score = 192 bits (488), Expect = 6e-47, Method: Composition-based stats. Identities = 99/341 (29%), Positives = 167/341 (48%), Gaps = 9/341 (2%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 ++R + + ++ L +E+ L+ + KE L ++ Sbjct: 10 IERFEEITRLLGTMEVISDIKRMTELSKEQSALEALVLKAKEYLQTHRSIQENRALFEDK 69 Query: 80 D-DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 + +E + ++ + + D + YLE+ AG GG E+ + L Sbjct: 70 ELGDLAKEENKLLEESLESLESEIKLLLIPKDPNDDKNIYLEIRAGTGGDEAGIFVGDLF 129 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 + Y R+A+ + +K E + + G K LIKG Y LK E G HR+ R+ +S Sbjct: 130 KSYCRYADLKGWKVEIISSSENSVGGYKEVIALIKGNGVYSRLKYEGGTHRVQRVPETES 189 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 R HTS ++ + P D +E+ I+ +D +ID +R+ G GGQ VNTTDSAVRITH+PTG Sbjct: 190 QGRIHTSAITVAIMP-EVDDVEVNINPNDLKIDVFRSGGHGGQSVNTTDSAVRITHLPTG 248 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315 + V Q E+SQHKNK +A +L+A+LYE EL+ +++ + K ++G G +IR+Y Sbjct: 249 ISVSMQDEKSQHKNKDKALKILKARLYEAELE--AKLSENSAARKLQVGSGDRSERIRTY 306 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355 P + D R + S +++ G+ D + +A + Sbjct: 307 NY-PQNRLTDHRIGLTLYSLEEIMLSGNFDQVVDPIVAHYQ 346 >gi|306842976|ref|ZP_07475610.1| peptide chain release factor 1 [Brucella sp. BO2] gi|306286904|gb|EFM58429.1| peptide chain release factor 1 [Brucella sp. BO2] Length = 315 Score = 192 bits (487), Expect = 7e-47, Method: Composition-based stats. Identities = 109/308 (35%), Positives = 171/308 (55%), Gaps = 13/308 (4%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSG 110 + I+E+ D + L + + + ++ + + + Q L Sbjct: 2 VGKIRELSDARKEASDLAAMRDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKD 61 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 AD +A LE+ AG GG E+ +A L RMY R+A ++ ++ E + +G+ G K Sbjct: 62 VADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 121 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 + G + LK E GVHR+ R+ ++ R HTS +++ V P + I+IEI D RI Sbjct: 122 TVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRI 180 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A +LRA+LY++E Q Sbjct: 181 DTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQ 239 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 K + ++ ++++G G +IR+Y P V D R N+ V++GDLD+ + Sbjct: 240 K--AESERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELV 296 Query: 348 KATLAIKK 355 A ++ + Sbjct: 297 DALISDHQ 304 >gi|256751358|ref|ZP_05492237.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus CCSD1] gi|256749740|gb|EEU62765.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus CCSD1] Length = 246 Score = 192 bits (487), Expect = 7e-47, Method: Composition-based stats. Identities = 101/240 (42%), Positives = 153/240 (63%), Gaps = 7/240 (2%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +E+ AGAGG E+ +A+ L RMY+ +AEK+ +K E + ++ + G K L I G +Y Sbjct: 1 MEIRAGAGGEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGSY 60 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 LK E GVHR+ R+ ++ R HTS +++ V P + +++EI+ +D +ID +R+ G Sbjct: 61 SRLKYESGVHRVQRVPTTEAGGRIHTSTATVAVLP-EVEEVDVEINPNDIKIDVFRSGGH 119 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ VNTTDSAVR+THIPTG+VV CQ ERSQ +N+ +A +LRAKLYE+ LQ+++ I Sbjct: 120 GGQSVNTTDSAVRVTHIPTGIVVTCQDERSQIQNRERALKILRAKLYEMALQEQQ--REI 177 Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 E+ K+++G G +IR+Y P V D R + +VLDGDLD+ + A + + Sbjct: 178 AETRKSQVGTGERSERIRTYNF-PQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALILNDQ 236 >gi|225022790|ref|ZP_03711982.1| hypothetical protein CORMATOL_02835 [Corynebacterium matruchotii ATCC 33806] gi|305682007|ref|ZP_07404811.1| peptide chain release factor 1 [Corynebacterium matruchotii ATCC 14266] gi|224944397|gb|EEG25606.1| hypothetical protein CORMATOL_02835 [Corynebacterium matruchotii ATCC 33806] gi|305658480|gb|EFM47983.1| peptide chain release factor 1 [Corynebacterium matruchotii ATCC 14266] Length = 360 Score = 192 bits (487), Expect = 7e-47, Method: Composition-based stats. Identities = 110/346 (31%), Positives = 169/346 (48%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ V + + DP + + L + L + ++ D E+ Sbjct: 11 VDDIVSEYQGIEAQMSDPETVGDQALFRKLSKRYSELQPIMKVNTALEQARADLADAKEM 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D E + E D +D +E+ AGAGG E+ +A Sbjct: 71 --AYEDSEFAPEADRLAGEVVELEEKLADLLAPRDPHDGDDIVMEIKAGAGGEEAALFAG 128 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-----YGWLKGEQGVHRL 190 L+RMY R+A+K F TE L + + + G+K TL I+ + K E GVHR+ Sbjct: 129 ELVRMYQRYADKHGFSTEVLGLSESDLGGVKDMTLSIRSKQPSRDGAWSVFKFEGGVHRV 188 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R TS + + VYP D+ +EI + D R+D YR+SG GGQ VNTTDSAV Sbjct: 189 QRVPVTESQGRIQTSAAGVLVYPEPDEIAAVEIDDKDIRVDVYRSSGKGGQGVNTTDSAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG+VV CQ+ERSQ +NKA+A +L A+L L ++ E A G +++ + Sbjct: 249 RITHLPTGIVVTCQKERSQIQNKARALQVLAARLQALAEEQAEAEAAQGRAAQIRTLDRS 308 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + + VL+GD++D A ++ Sbjct: 309 ERIRTYNW-PENRISDHRIGFKANNLDSVLNGDMEDLFTALRTAER 353 >gi|297183691|gb|ADI19816.1| protein chain release factor a [uncultured alpha proteobacterium EB000_37G09] Length = 357 Score = 192 bits (487), Expect = 8e-47, Method: Composition-based stats. Identities = 115/348 (33%), Positives = 176/348 (50%), Gaps = 14/348 (4%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLILL 73 + + R + ++ E L RE + + + + L D ++ Sbjct: 8 EKVLARREEIESQLSQSGSLS-SDELTKLSRELAEVRPVAEQVFVVRHLAQALADARQMI 66 Query: 74 ELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E + + + + ET + + + L DS +A LEV AG GG E+ Sbjct: 67 EEEGADPEMAEMAETEISELGPQLTEAEHDLKLLLLPKDTDDSRNAILEVRAGTGGDEAA 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L MY R A + +K E +EI + G K AT I G + + LK E GVHR+ Sbjct: 127 LFAADLFGMYQRTASRYGWKFEVMEISETGIGGYKEATANISGQDVFARLKFESGVHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P ++IE+SESD R+D +RASG GGQ VNTTDSAVR Sbjct: 187 RVPETETGGRIHTSAATVAVLP-EAQDVDIEVSESDLRVDVFRASGPGGQSVNTTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV Q E+SQHKN+A+A +LRA++Y+ E +++ S K ++G G Sbjct: 246 ITHLPTGIVVSQQDEKSQHKNRAKAMKILRARIYDAERARQQAER--AASRKGQVGSGDR 303 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 +IR+Y P V D R N VL G+ +D+ + A + + Sbjct: 304 SERIRTYNF-PQGRVTDHRINFTLYKLDKVLAGEAIDEVIDALASEDQ 350 >gi|153005568|ref|YP_001379893.1| peptide chain release factor 2 [Anaeromyxobacter sp. Fw109-5] gi|152029141|gb|ABS26909.1| peptide chain release factor 2 [Anaeromyxobacter sp. Fw109-5] Length = 309 Score = 192 bits (487), Expect = 8e-47, Method: Composition-based stats. Identities = 145/278 (52%), Positives = 194/278 (69%) Query: 57 SFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND 116 + ++ L D L ELA E D + QE + + + ++E +F+ +LSGE D Sbjct: 3 AAYARVRRSLDDAEALAELADEARDEATRQEAAQQCEVVAKDLEALEFQKMLSGEHDRAG 62 Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 A +EV +GAGG E+ DWA ML RMYTR+ E+R + E ++ GEEAGI A+ + +G Sbjct: 63 AIVEVKSGAGGVEAMDWAAMLYRMYTRYCERRGWSVEPADLVAGEEAGISQASFIARGEF 122 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 AYG+LK E+GVHRLVRISP+D +RR TSF+++ V P ++D I ++I E+D RIDTYR+S Sbjct: 123 AYGFLKAERGVHRLVRISPFDQAARRQTSFAAVDVTPEIEDDIVVDIKEADVRIDTYRSS 182 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 GAGGQ VN TDSAVR+TH+PTG+VV Q ERSQ KN+ AW +LRAKLYELE +KR E Sbjct: 183 GAGGQKVNKTDSAVRLTHLPTGIVVAVQNERSQQKNRGVAWKILRAKLYELEEKKRAEAR 242 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 + E++K +I +G QIRSYVLQPY+MVKDLRT +E Sbjct: 243 DAVEATKKDIDFGSQIRSYVLQPYRMVKDLRTGVETGK 280 >gi|24212814|ref|NP_710295.1| peptide chain release factor 1 [Leptospira interrogans serovar Lai str. 56601] gi|45656013|ref|YP_000099.1| peptide chain release factor 1 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|32171561|sp|Q8F9S6|RF1_LEPIN RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|59798055|sp|Q72W38|RF1_LEPIC RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|24193465|gb|AAN47313.1| peptide chain release factor 1 [Leptospira interrogans serovar Lai str. 56601] gi|45599246|gb|AAS68736.1| peptide chain release factor 1 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 354 Score = 192 bits (487), Expect = 8e-47, Method: Composition-based stats. Identities = 113/347 (32%), Positives = 177/347 (51%), Gaps = 14/347 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA---ISFIKEIQDRLCDNLIL 72 + ++ ++ + ++ K L +ER L + +I D L Sbjct: 5 LEKIQEKYLRISEELNQ---AKDPSSLKNLYKERSRLTPLYLKVEEYLKIYKDRKDAEEL 61 Query: 73 LELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ++ +E+ S+L+E + L + +E+ AG GG E+ Sbjct: 62 IQSEKDEEMHSMLKEEIREANLKLETLEREFEILLLPPDPNSGKNILVEIRAGTGGEEAG 121 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + L RMY+++A+K+K KTE ++ G+K ++ AY K E G HR+ Sbjct: 122 LFVADLFRMYSKFADKQKIKTEIIDSSPTGIGGLKEIIFALEDDRAYDLFKFEGGTHRVQ 181 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS ++ V P D E++I+ESD RID YR+SGAGGQHVNTTDSAVR Sbjct: 182 RIPSTESGGRIHTSAVTVAVLP-EADEEEVQINESDLRIDVYRSSGAGGQHVNTTDSAVR 240 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIPTGVVV CQ E+SQHKNKA+A +L A++ E + + +++ ++ + K IG G Sbjct: 241 ITHIPTGVVVACQDEKSQHKNKAKALRILSARILEKQAEDKKQASDAIK--KQMIGSGDR 298 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 ++R+Y P D R + S +++GDLD+ + A + Sbjct: 299 SERVRTYNF-PQGRCTDHRIGFTSHNLSAIMEGDLDELIGALTEEDR 344 >gi|158334426|ref|YP_001515598.1| peptide chain release factor 1 [Acaryochloris marina MBIC11017] gi|189039957|sp|B0C424|RF1_ACAM1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|158304667|gb|ABW26284.1| peptide chain release factor 1 [Acaryochloris marina MBIC11017] Length = 363 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 107/344 (31%), Positives = 180/344 (52%), Gaps = 13/344 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + Q L + DP + N E + + + R L+ ++ ++ + + ++ Sbjct: 10 LKSVEQTFHELTRRLGDPEVATNPTEFQEVAKARASLEETVNTFEDWKATQQELADAQQM 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130 A + D+ L+E + E + L D + LE+ AGAGG E+ Sbjct: 70 AKDGDEDPELKEMAAMEAAELTEKLDGLETKLKVLLLPRDPNDEKNIMLEIRAGAGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L+R+Y+++AE +K++ + L GE G K A L I+G Y LK E GVHR+ Sbjct: 130 SIWAGDLVRIYSKYAESQKWRVKLLSESGGEMGGFKEAILEIQGERVYSKLKYEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +++ R HTS +++ V P D +EIEI D + T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPATEASGRVHTSTATVAVMP-EVDDVEIEIDPKDIEMSTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ + C +ERSQ +NK +A +LRAKLYE+ELQ+++ A++ ++++G G Sbjct: 249 DLVHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMELQEQQ--ASVTSMRRSQVGTGA 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +IR+Y + D R N + VL GD++ ++ + Sbjct: 307 RSEKIRTYNYKD-NRATDHRLN-QNFPLEKVLVGDIELILETCI 348 >gi|254293181|ref|YP_003059204.1| peptide chain release factor 1 [Hirschia baltica ATCC 49814] gi|254041712|gb|ACT58507.1| peptide chain release factor 1 [Hirschia baltica ATCC 49814] Length = 359 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 108/349 (30%), Positives = 172/349 (49%), Gaps = 17/349 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + R + + + E L ++ L +E+ D + Sbjct: 9 LTQVIDRFEQTEARMS---VATDPTEIVQLSKDHAELKLVADKARELMDAREALAEADAI 65 Query: 76 ALEEDDCSILQETSDNLQRIKL-----EVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 ++D + ++E + + + Q L E D +A LEV AG GG E+ Sbjct: 66 LSDKDSDADMKELAQEEREELKSSLPELEQSLQLLLLPKDEDDEANAMLEVRAGTGGDEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A+ + +K + +G+ G K + G +G +K E GVHR+ Sbjct: 126 ALFAGDLFRMYQRYAQIQGWKLDIESQSEGDAGGYKEIIASVTGKGVFGKMKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +S+ V P + + IEI + RIDT R+SGAGGQHVNTTDSAV Sbjct: 186 QRVPKTESAGRIHTSAASVAVLP-APEQVNIEIKPEEIRIDTMRSSGAGGQHVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RI H+PT ++V E+SQH N+A+A ML+ +LYE E +++ A + ++ KT++G G Sbjct: 245 RIIHLPTNIMVTSS-EKSQHANRARAMEMLKIRLYEKERAEKD--AAMADARKTQVGSGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 +IR+Y P V D R + +L GD + + + A +A + Sbjct: 302 RSEKIRTYNF-PENRVSDHRIKLTLYKLEQILAGDSISEVIDALIAEDQ 349 >gi|256827314|ref|YP_003151273.1| peptide chain release factor 1 [Cryptobacterium curtum DSM 15641] gi|256583457|gb|ACU94591.1| bacterial peptide chain release factor 1 (bRF-1) [Cryptobacterium curtum DSM 15641] Length = 357 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 114/349 (32%), Positives = 174/349 (49%), Gaps = 15/349 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + ++ L T+ DP + + E L +E H + + + D E+ Sbjct: 7 LEKIIEAYRDLQTRMSDPAVISDQKEYNRLAKEYAHQGPLATAARTYVQDIDDLAEAKEM 66 Query: 76 ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D QE ++ + +F + + AD D +E+ AGAGG E+ +A Sbjct: 67 ISDADMREFAQEEITRIENELPGLEDDIKFMLIPADPADDKDIIVEIRAGAGGDEAALFA 126 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L +MY+ +A+ + +K E L E G K +KG Y +K E GVHR+ R+ Sbjct: 127 GDLFKMYSHFADVKGWKIEVLNASASEAGGYKEIQFKVKGDKVYSEMKFESGVHRVQRVP 186 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS +++ V P D +E+++ + D RID YRA G GGQ VNTTDSAVRITH Sbjct: 187 KTESQGRIHTSTATVAVLP-EADEVEVDVKQEDLRIDVYRAGGPGGQCVNTTDSAVRITH 245 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VVQ Q ++SQ +NK A +LRA+LYE L+++ A G + +IG G + Sbjct: 246 LPTGLVVQSQDQKSQLQNKIAAMAVLRARLYEKMLEEQR--AAEGAERRAQIGTGDRSEK 303 Query: 312 IRSYVLQPYQMVKDLRTNIE-KTSPSDVL--DG--DLDDFMKATLAIKK 355 IR+Y P V D R + +L G L+D + A A + Sbjct: 304 IRTYN-GPQDRVTDHRIGYNGTYN--GILMNAGGAGLEDLITALQAADR 349 >gi|15644115|ref|NP_229164.1| peptide chain release factor 1 [Thermotoga maritima MSB8] gi|7388056|sp|Q9X183|RF1_THEMA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|52695394|pdb|1RQ0|A Chain A, Crystal Structure Of Peptide Releasing Factor 1 gi|52695395|pdb|1RQ0|B Chain B, Crystal Structure Of Peptide Releasing Factor 1 gi|52695396|pdb|1RQ0|C Chain C, Crystal Structure Of Peptide Releasing Factor 1 gi|4981923|gb|AAD36433.1|AE001790_5 peptide chain release factor RF-1 [Thermotoga maritima MSB8] Length = 342 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 114/326 (34%), Positives = 171/326 (52%), Gaps = 18/326 (5%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 P L + K E ++ + I++ +L + Sbjct: 11 LLARPDLT--PEQMKNYGMEYAKIEEIENITNRIKETQEFIELL---------REEGENE 59 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + + K + Q L S+ A +E+ G GG E+ +A L RMYTR+AE++ Sbjct: 60 LEIEKYEKELDQLYQELLFLLSPEASDKAIVEIRPGTGGEEAALFARDLFRMYTRYAERK 119 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 + E EIH+ + GI+ +KG NAYG LK E GVHR+ R+ +S R HTS ++ Sbjct: 120 GWNLEVAEIHETDLGGIREVVFFVKGKNAYGILKYESGVHRVQRVPVTESGGRIHTSTAT 179 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P +++ I D +I+T+RASG GGQ+VN T+SAVRITH+PTG+VV CQ ERS Sbjct: 180 VAVLPEIEEKDIE-IRPEDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERS 238 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKD 325 Q++NK A +LRA+LY+L QK ++ I + K++IG G + IR+Y P V D Sbjct: 239 QYQNKQTALRILRARLYQL--QKEQKEREISQKRKSQIGTGERSEKIRTYNF-PQNRVTD 295 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 R N ++LDGDLD+ + + Sbjct: 296 HRINYTSYRLQEILDGDLDEIISKLI 321 >gi|260879267|ref|ZP_05891622.1| peptide chain release factor 1 [Vibrio parahaemolyticus AN-5034] gi|308089661|gb|EFO39356.1| peptide chain release factor 1 [Vibrio parahaemolyticus AN-5034] Length = 325 Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats. Identities = 107/311 (34%), Positives = 164/311 (52%), Gaps = 9/311 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R + DP + + + + L +E L+ + Q D E+ Sbjct: 9 LETLVERYEEVQHLLGDPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQDDLAAAEEM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 A E+D+ + + Q L D + +LE+ AGAGG E+ Sbjct: 69 AKEDDEEMREMAQEEIKDAKEAIERLADELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+++AEKR ++ E + ++ E G K + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ V + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RI Sbjct: 189 VPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG VV+CQ ERSQHKNKA+A +L A++ + E ++R + ++ + +G G Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEQERRAAE--VSDTRRNLLGSGDRS 306 Query: 310 RQIRSYVLQPY 320 +IR+Y P Sbjct: 307 DRIRTYNY-PQ 316 >gi|6469929|gb|AAF13494.1|AF130466_1 peptide chain release factor 2 [Campylobacter jejuni] Length = 269 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 150/260 (57%), Positives = 188/260 (72%), Gaps = 2/260 (0%) Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + + + LLSGE D +A + +H GAGGTES DWA++L RMY R+ E+ FK E L Sbjct: 10 EDTITSLEISMLLSGENDGKNAIVSIHPGAGGTESNDWASILYRMYLRFCEREGFKVETL 69 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 + +GEEAG+K + L+KG NAYG+LK E G+HRLVR SP+DS RRHTSFSS+ V P + Sbjct: 70 DFQEGEEAGLKDVSFLVKGENAYGYLKAENGIHRLVRTSPFDSAGRRHTSFSSVMVSPEL 129 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DD IEIEI E D RID YRASGAGGQHVN T+SAVRITH PTG+VVQCQ +RSQHKNKA Sbjct: 130 DDDIEIEIEEKDIRIDYYRASGAGGQHVNKTESAVRITHFPTGIVVQCQNDRSQHKNKAT 189 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A+ ML+++LYELEL K+++ AN K+EIGWG QIRSYVL PYQ VKD R+ + Sbjct: 190 AFKMLKSRLYELELMKQQDSANT--GEKSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQV 247 Query: 336 SDVLDGDLDDFMKATLAIKK 355 ++LDGD+ ++ L K Sbjct: 248 DNILDGDIKKMIEGVLIALK 267 >gi|332671313|ref|YP_004454321.1| peptide chain release factor 1 [Cellulomonas fimi ATCC 484] gi|332340351|gb|AEE46934.1| peptide chain release factor 1 [Cellulomonas fimi ATCC 484] Length = 362 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 108/344 (31%), Positives = 166/344 (48%), Gaps = 11/344 (3%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + + + + DP + + A+ L R L + + D ELA Sbjct: 11 LLDEHAEIEARLADPAVHADAALARRLGRRYAELGRVAQAYRAWRAASDDAEAAAELAEV 70 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 ++ + ++ R + D+ D LE+ AG GG ES +A LL Sbjct: 71 DEAFAAELPALQDVARTAEARLRDVL--VPRDPDDARDVILEIKAGEGGEESALFAGDLL 128 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLV 191 RMYTR+AE+ ++T+ LE + + G K L + + LK E GVHR+ Sbjct: 129 RMYTRYAERMGWQTQVLESTESDLGGFKDVHLSVKARGAVAPEDGVWAHLKYEGGVHRVQ 188 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS + + V P +D E++I +D RID YR+SG GGQ VNTTDSAVR Sbjct: 189 RVPVTESQGRIHTSAAGVLVLPEAEDEGEVDIDPNDLRIDVYRSSGPGGQSVNTTDSAVR 248 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGR 310 ITH+PTG+VV Q E+SQ +N+ QA +LRA+L ++ A+ S+ + Sbjct: 249 ITHLPTGIVVSMQNEKSQLQNREQAMRVLRARLLAARQEEAAAAASQARRSQVRTVDRSE 308 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RT + + VL GDL +++ + Sbjct: 309 RIRTYNF-PENRIADHRTGYKAYNLDAVLGGDLGPVVQSAIDAD 351 >gi|168056816|ref|XP_001780414.1| predicted protein [Physcomitrella patens subsp. patens] gi|162668174|gb|EDQ54787.1| predicted protein [Physcomitrella patens subsp. patens] Length = 362 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 122/354 (34%), Positives = 183/354 (51%), Gaps = 19/354 (5%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 G+ R S LN + E L +E L++ ++ I +++ + Sbjct: 7 RGML---AIEHRHSRLNQALSESAAC--PDEIIRLSKELSKLEDLMACITSLKNTRKEIE 61 Query: 71 ILLELALEEDDCSILQETSDNLQRIK-----LEVEYKQFESLLSGEADSNDAYLEVHAGA 125 L L E + +++ + R +++ L EADS LEV AG Sbjct: 62 GLKMLIEESAEDEDMKQAAAEELRSVSNLETEDLQRMLLLMLPKDEADSRGCILEVRAGT 121 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A+ + RMY R+A+K+ + E L I G K A+ I G YG LK E Sbjct: 122 GGDEASLFASDIFRMYERYAQKKLWSFEVLSITQTNSKGYKEASASITGDGVYGKLKFES 181 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ + + R HTS +S+ V P D +++++ D RIDTYRA GAGGQH NT Sbjct: 182 GVHRVQRVPVTEKSGRVHTSAASVAVLPQ-ADEVDVQMRNEDLRIDTYRAGGAGGQHANT 240 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T SAVR+TH+PTG+V+ Q ERSQH N+A++ +LRAKL+E E ++ + + Sbjct: 241 TSSAVRVTHLPTGIVIAIQDERSQHMNRAKSLKLLRAKLFERERMQQAMARSTLRLE--Q 298 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 IG G +IR+Y P V D R NI + S ++ G+ LD F+ A L +K+ Sbjct: 299 IGSGDRSERIRTYNF-PQGRVTDHRVNITQHSIVQIMQGEGLDGFIDA-LTMKQ 350 >gi|93279782|pdb|2FVO|A Chain A, Docking Of The Modified Rf1 X-Ray Structure Into The Low Resolution Cryo-Em Map Of E.Coli 70s Ribosome Bound With Rf1 Length = 333 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 114/326 (34%), Positives = 171/326 (52%), Gaps = 18/326 (5%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 P L + K E ++ + I++ +L + Sbjct: 11 LLARPDLT--PEQMKNYGMEYAKIEEIENITNRIKETQEFIELL---------REEGENE 59 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + + K + Q L S+ A +E+ G GG E+ +A L RMYTR+AE++ Sbjct: 60 LEIEKYEKELDQLYQELLFLLSPEASDKAIVEIRPGTGGEEAALFARDLFRMYTRYAERK 119 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 + E EIH+ + GI+ +KG NAYG LK E GVHR+ R+ +S R HTS ++ Sbjct: 120 GWNLEVAEIHETDLGGIREVVFFVKGKNAYGILKYESGVHRVQRVPVTESGGRIHTSTAT 179 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P +++ I D +I+T+RASG GGQ+VN T+SAVRITH+PTG+VV CQ ERS Sbjct: 180 VAVLPEIEEKDIE-IRPEDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERS 238 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKD 325 Q++NK A +LRA+LY+L QK ++ I + K++IG G + IR+Y P V D Sbjct: 239 QYQNKQTALRILRARLYQL--QKEQKEREISQKRKSQIGTGERSEKIRTYNF-PQNRVTD 295 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 R N ++LDGDLD+ + + Sbjct: 296 HRINYTSYRLQEILDGDLDEIISKLI 321 >gi|293189723|ref|ZP_06608439.1| peptide chain release factor 1 [Actinomyces odontolyticus F0309] gi|292821313|gb|EFF80256.1| peptide chain release factor 1 [Actinomyces odontolyticus F0309] Length = 364 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 108/344 (31%), Positives = 156/344 (45%), Gaps = 11/344 (3%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 +Q + + DP + + + R L + + D ELA E Sbjct: 13 LLQEYEQVEAQMADPQTLADPQLMRRVGRRYAELGRVKAAADRLASASGDLEAARELAAE 72 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 + + + + E K D+ D LE+ AG GG ES +A+ L Sbjct: 73 DRSFADEIPALEEEEAAAHEALVKIL--APRDPEDAMDVILEIKAGEGGEESALFASDLA 130 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLV 191 RMY R+AE + + E G K TL I + LK E GVHR+ Sbjct: 131 RMYARYAEAHGWSVTEMSATHTELGGFKDITLAIRAKGTPAPDEGVWAHLKYEGGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS + ++V P ++D EI I +D RID YR+SG GGQ VNTTDSAVR Sbjct: 191 RVPVTESQGRIHTSAAGVFVMPEIEDDEEIVIDPNDLRIDVYRSSGPGGQSVNTTDSAVR 250 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGR 310 ITHIP+G+VV Q E+SQ +NK A +L ++L K+E A+ S+ + Sbjct: 251 ITHIPSGIVVSMQNEKSQLQNKEAALRVLASRLAAEARAKKEAEASAQRLSQVRTVDRSE 310 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RT + + VL G LD + + Sbjct: 311 RIRTYNF-PENRIADHRTGFKAHNLDAVLSGALDAVIASLQEAD 353 >gi|154509273|ref|ZP_02044915.1| hypothetical protein ACTODO_01798 [Actinomyces odontolyticus ATCC 17982] gi|153798907|gb|EDN81327.1| hypothetical protein ACTODO_01798 [Actinomyces odontolyticus ATCC 17982] Length = 364 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 107/344 (31%), Positives = 156/344 (45%), Gaps = 11/344 (3%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 +Q + + DP + + + R L + + D ELA E Sbjct: 13 LLQEYEQVEAQMADPQTLADPQLMRRVGRRYAELGRVKAAADRLASASGDLEAARELAAE 72 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 + + + + E K D+ D LE+ AG GG ES +A+ L Sbjct: 73 DRSFADEIPALEEEEAAAHEALVKIL--APRDPEDAMDVILEIKAGEGGEESALFASDLA 130 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLV 191 RMY R+AE + + E G K TL I + LK E GVHR+ Sbjct: 131 RMYARYAEAHGWSVTEMSATHTELGGFKDITLAIRAKGTPAPDEGVWAHLKYEGGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS + ++V P ++D EI I +D RID YR+SG GGQ VNTTDSAVR Sbjct: 191 RVPVTESQGRIHTSAAGVFVMPEIEDDEEIVIDPNDLRIDVYRSSGPGGQSVNTTDSAVR 250 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGR 310 ITHIP+G+VV Q E+SQ +NK A +L ++L ++E A+ S+ + Sbjct: 251 ITHIPSGIVVSMQNEKSQLQNKEAALRVLASRLAAEARARKEAEASAQRLSQVRTVDRSE 310 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RT + + VL G LD + + Sbjct: 311 RIRTYNF-PENRIADHRTGFKAHNLDAVLSGALDAVIASLQEAD 353 >gi|126643323|ref|YP_001086307.1| peptide chain release factor 2 [Acinetobacter baumannii ATCC 17978] Length = 278 Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats. Identities = 155/268 (57%), Positives = 197/268 (73%), Gaps = 1/268 (0%) Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 +L+LA+E DD S+L++ L + E+ +F + S D N Y+E+ AG+GGTE+Q Sbjct: 1 MLDLAVEADDESLLEDVQSELSTAEEELAKLEFRRMFSNPMDPNPCYVEIQAGSGGTEAQ 60 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 DWA+MLLRMY RW E+ FK E +E+ DG+ AGIKSAT+ ++G AYGWL+ E GVHRLV Sbjct: 61 DWASMLLRMYMRWIERHGFKAELMEVSDGDVAGIKSATIRVEGEYAYGWLRTESGVHRLV 120 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS +RRHTSFS++++ P VDD+IEI+I+ SD R DTYRASGAGGQH+N TDSAVR Sbjct: 121 RKSPFDSGNRRHTSFSAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVR 180 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +THIPTG+VV CQ +RSQH N+ AW LRAKLYELE+QKR E A E SK++IGWG Q Sbjct: 181 LTHIPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMQKRNEAAQALEDSKSDIGWGSQ 240 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 IRSYVL +KDLRT +E L Sbjct: 241 IRSYVLDD-SRIKDLRTGVEIQILVRFL 267 >gi|269215990|ref|ZP_06159844.1| peptide chain release factor 1 [Slackia exigua ATCC 700122] gi|269130249|gb|EEZ61327.1| peptide chain release factor 1 [Slackia exigua ATCC 700122] Length = 356 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 115/347 (33%), Positives = 168/347 (48%), Gaps = 14/347 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ + + K DP + + E L +E + + + D E+ Sbjct: 9 LTKIIEGYAEIEEKLGDPAVLADQREYTRLSKEFANQAALVGKANDYLQACRDIDDAKEM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D QET + + + + AD D +E+ AGG E+ +A Sbjct: 69 LGDPDMREFAQETIAESEAKLPALAETIKVMLIPDDPADEKDIIVEIRGAAGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L +MY R+ E R +K E L+ E G K +KG + Y +K E GVHR+ R+ Sbjct: 129 GDLYKMYVRFCESRGWKVENLDASASEAGGFKKIEFKVKGDHVYSLMKFESGVHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R TS +++ V P D I++EI+E D RID YRA G GGQ VNTTDSAVRITH Sbjct: 189 KTESQGRIQTSTATVAVLP-EADEIDVEINEGDLRIDVYRAGGPGGQCVNTTDSAVRITH 247 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +P+G+VVQ Q ++SQ +NK A +LRA+LYE L +++ A G +IG G + Sbjct: 248 LPSGLVVQSQDQKSQLQNKIAAMAVLRARLYEKMLAEQQ--AAEGAERLAQIGSGDRAEK 305 Query: 312 IRSYVLQPYQMVKDLRTNIE-KTSPSDVL--DGDLDDFMKATLAIKK 355 IR+Y P V D R + VL DG L D + A A + Sbjct: 306 IRTYN-APQDRVTDHRIGYNGTYN--GVLLADG-LADLIVALQAADR 348 >gi|170289255|ref|YP_001739493.1| peptide chain release factor 1 [Thermotoga sp. RQ2] gi|281412857|ref|YP_003346936.1| peptide chain release factor 1 [Thermotoga naphthophila RKU-10] gi|170176758|gb|ACB09810.1| peptide chain release factor 1 [Thermotoga sp. RQ2] gi|281373960|gb|ADA67522.1| peptide chain release factor 1 [Thermotoga naphthophila RKU-10] Length = 342 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 116/326 (35%), Positives = 172/326 (52%), Gaps = 18/326 (5%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 P L + K E ++ + I++ +L + Sbjct: 11 LLARPDLT--PEQMKNYGIEYAKIEEIENIANRIKETQEFIELL---------REEGENE 59 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + + K + Q LL + A +E+ GAGG E+ +A L RMYTR+AE++ Sbjct: 60 LEIEKYEKELDQLYQELLLLLSSEVGDKAIVEIRPGAGGEEAALFARDLFRMYTRYAERK 119 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 + E EIH+ + GI+ +KG NAYG LK E GVHR+ RI +S R HTS ++ Sbjct: 120 GWNLEVAEIHETDLGGIREVVFFVKGKNAYGILKYESGVHRVQRIPVTESGGRIHTSTAT 179 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P +++ I D +I+T+RASG GGQ+VN T+SAVRITHIPTG+VV CQ ERS Sbjct: 180 VAVLPEIEEKDIE-IRPEDLKIETFRASGHGGQYVNKTESAVRITHIPTGIVVSCQNERS 238 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKD 325 Q++N+ A +LRA+LY+L QK ++ I + K++IG G + IR+Y P V D Sbjct: 239 QYQNRQTALRILRARLYQL--QKEQKEREISQKRKSQIGTGERSEKIRTYNF-PQNRVTD 295 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 R N ++LDGDLD+ + + Sbjct: 296 HRINYTSYRLQEILDGDLDEIISKLI 321 >gi|32267276|ref|NP_861308.1| peptide chain release factor 1 [Helicobacter hepaticus ATCC 51449] gi|46576742|sp|Q7VFA0|RF1_HELHP RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|32263329|gb|AAP78374.1| peptide chain release factor 1 [Helicobacter hepaticus ATCC 51449] Length = 355 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 110/345 (31%), Positives = 180/345 (52%), Gaps = 9/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 V R +++ + N+ + L +E+ +++ K L + + L Sbjct: 6 LKPIVARYDEISSLLSSESVLSNIKQLTELSKEQSDIESIAQNAKTYFSILENIVQNKAL 65 Query: 76 ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +++ + +E +L+ K E + + D+ + YLE+ AG GG E+ + Sbjct: 66 LEDKELGELAKEELKDLESAKATLEEEIKLLLIPKDPNDNKNIYLEIRAGTGGDEAGIFV 125 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L + Y R+A+ +K+K E + ++ G K L+KG AY LK E G HR+ R+ Sbjct: 126 GDLFKAYCRYADLQKWKVEIISSNENNVGGYKEVIALVKGNGAYSKLKFEGGTHRVQRVP 185 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ + P D +EI I+ +D +ID +R+ G GGQ VNTTDSAVRITH Sbjct: 186 ETESQGRIHTSAITVAIMP-EVDDVEININPNDLKIDVFRSGGHGGQSVNTTDSAVRITH 244 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTG+ V Q E+SQHKNK +A +L+A+LYE EL+ + E+ KT++G G + Sbjct: 245 IPTGISVSMQDEKSQHKNKDKALKILKARLYEAELEAQNAQNK--EARKTQVGSGDRSER 302 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 IR+Y P + D R + S +++ G LD+F+ +A + Sbjct: 303 IRTYNY-PQNRLTDHRIGLTLYSLEEIMLGGLLDEFINPLIAHAQ 346 >gi|312194810|ref|YP_004014871.1| peptide chain release factor 1 [Frankia sp. EuI1c] gi|311226146|gb|ADP79001.1| peptide chain release factor 1 [Frankia sp. EuI1c] Length = 360 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 116/332 (34%), Positives = 174/332 (52%), Gaps = 13/332 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + + + + DP + +V EA+ L R L + +EI+ D EL Sbjct: 5 LERMLDEHAVIEKRLADPAVHNDVGEARALGRRYAELAPIVELAREIEQANGDLETAREL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D S E +D I+ + + + D DA LEV AGAGG ES +A Sbjct: 65 --AVEDPSFRAEVTDLETAIQDRRQRLRTLLAPTDPDDGRDAILEVKAGAGGEESALFAG 122 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG--------PNAYGWLKGEQGV 187 LLRMY R+AE+R +KTE LE + + G + ++ +K P YG L+ E GV Sbjct: 123 DLLRMYLRYAERRGWKTEILEANPSDLGGYRDVSVAVKYRGQVPPGQPGVYGRLRFEGGV 182 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS + + V P + ++++I +D RID +R+SG GGQ VNTTD Sbjct: 183 HRVQRVPVTESAGRIHTSAAGVLVMP-EAEEVDVQIDPNDLRIDVFRSSGPGGQSVNTTD 241 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-I 306 SAVRITH+PTGVVV CQ E+SQ +NK A +LRA+L + +K E + +S+ + Sbjct: 242 SAVRITHVPTGVVVSCQNEKSQLQNKESALRILRARLLTVAREKAESEKSAARASQVRTM 301 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 ++R+Y P + D R N + + V Sbjct: 302 DRSDKVRTYNF-PENRIADHRVNYKAHNLEAV 332 >gi|295698346|ref|YP_003603001.1| peptide chain release factor 2 [Candidatus Riesia pediculicola USDA] gi|291156977|gb|ADD79422.1| peptide chain release factor 2 [Candidatus Riesia pediculicola USDA] Length = 369 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 154/373 (41%), Positives = 228/373 (61%), Gaps = 24/373 (6%) Query: 1 MKLSRQLNC----------LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQ 50 M++ + L L +F ++ L+ L K +W +K L Sbjct: 1 MEIKKILEDFKRSYREFQNLKNIFRYEEKKIELTTLRNKISSNEIW----RSKKLSS-LI 55 Query: 51 HLDNAISFIKEIQ-------DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ 103 L ++ + L + IL+E E+ D L+ET +L ++ +E + Sbjct: 56 GLQKLVAIKEIEIEKIEKIKQYLENIEILIECLKEKRDEDFLKETYRDLFNVRSMIENLK 115 Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163 L S E D D Y+++ +G+GG +SQDW +MLL+MY +W++ + F++ L GE Sbjct: 116 IFRLFSKENDFCDCYIDLQSGSGGIDSQDWTSMLLKMYLKWSDLKNFRSYVLNTSYGEIT 175 Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI-E 222 GIKS+T++IKG AYGWL+ E G+HRLVR SP+DS+ RRHTSFSS++VYPV++D + Sbjct: 176 GIKSSTIMIKGRYAYGWLRTETGIHRLVRKSPFDSSGRRHTSFSSVFVYPVLEDPDQEIR 235 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I SD +ID+Y++SGAGGQH N T+SA+RITHIPTG+V QCQ RSQHKNK QA L+ Sbjct: 236 IQSSDLKIDSYKSSGAGGQHTNKTESAIRITHIPTGIVTQCQSNRSQHKNKEQALKQLKN 295 Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 KLYE++ ++++E + E++K +I WG QIRSY+L + VKDLRT IE+ + VL+G Sbjct: 296 KLYEIQKKEKQENQKVIENNKFDIAWGNQIRSYILD-HSRVKDLRTGIEERNVRSVLEGK 354 Query: 343 LDDFMKATLAIKK 355 +D F+KA L ++K Sbjct: 355 IDKFIKANLILRK 367 >gi|303279527|ref|XP_003059056.1| predicted protein [Micromonas pusilla CCMP1545] gi|226458892|gb|EEH56188.1| predicted protein [Micromonas pusilla CCMP1545] Length = 337 Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats. Identities = 109/337 (32%), Positives = 173/337 (51%), Gaps = 9/337 (2%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 D + L+ L+ + + LW + AK +M + + + +D+L D L Sbjct: 1 LDPPSLRAMLADLDKRASEATLWDDPKNAKAVMEQLADVREQLELAAAFEDKLGDARTAL 60 Query: 74 ELALEEDDCSILQETSDNLQRI----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 E+ ++ ++ E + + + +E + LL G D+ A + ++AG GG + Sbjct: 61 EMIADDPSSDVVPELASEISDAIASLEAALETWETRRLLVGTYDALGATVFINAGFGGFD 120 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +WA L Y WA +R F GEE G++S TL I G AYG+L E+G HR Sbjct: 121 AHEWAERLESCYVAWARRRGFAVRVEARTPGEEVGLRSVTLEIDGRFAYGYLASEKGAHR 180 Query: 190 LVRISPYDSNSRR--HTSFSSIWVYPV---VDDSIEIEISESDCRIDTYRASGAGGQHVN 244 +VRI + R H++F ++ V P SI + I T R+ GAGGQ+VN Sbjct: 181 MVRIGGVAGQTPRGRHSNFVAVDVAPTLEEKARSIHWSPYDRVRVITTMRSGGAGGQNVN 240 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 ++AVR+ H+PTG+VV+C++ERSQ N+A+A L+AKL + ++R Sbjct: 241 KVETAVRMKHLPTGIVVRCEEERSQAMNRAKAIARLKAKLAAVAEERRLADVAAVRGDVV 300 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 G+QIR+YVL PY++VKD+RT +E + VL G Sbjct: 301 RAERGQQIRNYVLHPYKLVKDVRTGVETSDVDGVLSG 337 >gi|296775701|gb|ADH42977.1| protein chain release factor A [uncultured SAR11 cluster alpha proteobacterium H17925_38M03] Length = 358 Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats. Identities = 109/345 (31%), Positives = 177/345 (51%), Gaps = 14/345 (4%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 + + + L + + + +E +L + I K + L + Sbjct: 9 DIINKHMSLEKELSTGDI--DPKLFAKKSKEYSNLGSIIDSAKSFVKFDNEKKDLENIVK 66 Query: 78 EEDDCSIL-----QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 ++ + + ++ S+ +R + + L E D +A +E+ AG GG E+ Sbjct: 67 DKTNDPEMIDLAEKDLSELFKRREKWENDLKIFLLPKDEDDDKNAIVEIRAGTGGLEASL 126 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 + L +MY + K+K+ E + I E G K + G + Y +LK E GVHR+ R Sbjct: 127 FCADLFKMYEKVCSKKKWNLEIINISKSEAGGFKEVIFSVNGNDIYSYLKYESGVHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 I ++ R HTS +++ V P + ++IEI ESD R+D +RA G GGQ VNTTDSAVRI Sbjct: 187 IPETETQGRVHTSAATVAVLP-EVEEVDIEIKESDLRVDVFRAGGPGGQSVNTTDSAVRI 245 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 THIP+GVVV Q E+SQHKNKA+A +LR+++YE E +K+++ + +++IG G Sbjct: 246 THIPSGVVVSQQDEKSQHKNKAKALKILRSRVYEAEKRKKDQER--SSNRRSQIGSGDRS 303 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P V D R N+ + L GD+ + M L ++ Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTLHKLEEFLSGDIHEEMNQELRLQ 347 >gi|326510949|dbj|BAJ91822.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 411 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 97/348 (27%), Positives = 181/348 (52%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLIL 72 D+ + ++ + DP + + E + L + +L ++ KE + ++ + L Sbjct: 54 LDSTEKAWKEMSIRLGDPDIVSDPGEYQKLAQSVSNLGEVVTAYGEFKECERQIEETKAL 113 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQF--ESLLSGEADSNDAYLEVHAGAGGTES 130 + ++ D + + + +L ++ L S +S + LEV AG GG E+ Sbjct: 114 QKENGDDPDMAEMIASELESLSDQLAELEERLTVLLLPSDPLNSRNILLEVRAGTGGDEA 173 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L+RMY R+ E +K + + + E+ G K+ + +KG Y LK E GVHR+ Sbjct: 174 GIWAGDLVRMYQRYCELNNWKFKPVSCSEAEKGGFKTYVMEVKGKQVYSKLKFESGVHRV 233 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ + P D +++ I D + R+ GAGGQ+VN ++A+ Sbjct: 234 QRVPQTETMGRVHTSTATVAIMP-EADEVDVVIDPKDIELKAARSGGAGGQNVNKVETAI 292 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ + C +ERSQ +NK +A+ +LRAKLYE++L++++E +I ++G G Sbjct: 293 DLIHKPTGIRIFCTEERSQLQNKERAFQLLRAKLYEIKLREQQE--SIRTQRLLQVGTGA 350 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D R + S L GD++ +++ A+++ Sbjct: 351 RSEKIRTYNYKD-NRVTDHRLKM-NFILSSFLLGDIESAIQSCAALEQ 396 >gi|313837661|gb|EFS75375.1| peptide chain release factor 1 [Propionibacterium acnes HL037PA2] gi|314972601|gb|EFT16698.1| peptide chain release factor 1 [Propionibacterium acnes HL037PA3] Length = 388 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 111/343 (32%), Positives = 169/343 (49%), Gaps = 8/343 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +RL + + +P + + L + L + +S + D +L Sbjct: 36 IDEIRRRLREIEIQLANPAVLSDPSAMGRLGKRHARLRHVVSVADNVDQLNADIEAAEDL 95 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D +QE ++ L S D DA +E+H+G GG ES +A Sbjct: 96 --ANEDPVFVQEAERLRGQLDLARTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 153 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192 LLRMYTR+AE+ + L + G ++ + + AYG+LK E GVHR+ R Sbjct: 154 DLLRMYTRYAERVGWSVRELTSELTDLGGYRTVVVAVGGVPSRPAYGYLKHEGGVHRVQR 213 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S+ R HTS + V P VD++ I +D R+D YR+SG GGQ VNTTDSAVR+ Sbjct: 214 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPADIRVDVYRSSGPGGQGVNTTDSAVRL 272 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311 TH+PTG+VV CQ ERSQ +NKA+A MLRAK+ L Q+ + + + + + Sbjct: 273 THLPTGIVVSCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 332 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +R+Y P + D R + +L GDL + + A A + Sbjct: 333 VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGEVLDALHADE 374 >gi|90422036|ref|YP_530406.1| peptide chain release factor 1 [Rhodopseudomonas palustris BisB18] gi|119361591|sp|Q21BZ9|RF1_RHOPB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|90104050|gb|ABD86087.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodopseudomonas palustris BisB18] Length = 361 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 103/349 (29%), Positives = 170/349 (48%), Gaps = 16/349 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + + L + + + + LMRE L+ I +K + + + L Sbjct: 9 LDVLLAHHASLENQLQSQ-VGADT--YVKLMRELAELNPLIEAVKAYRQVGAERGEIDAL 65 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130 + + ++ ++ E + + + D + LE+ AG GG E+ Sbjct: 66 LADAATDAEMRAMAEAEHAALEAQEAELAQQIRVALLPKDAMDDRNVMLEIRAGTGGDEA 125 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY ++A + + E + +G G K +KG A+ LK E GVHR+ Sbjct: 126 SLFAGDLFRMYEKFAVLQGWSVEVVSASEGTMGGYKEIIAEVKGRGAFAKLKFESGVHRV 185 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + ++++I D RI+T RA GAGGQHVN T+SA+ Sbjct: 186 QRVPDTETQGRIHTSAATVAVLP-EVEEVDVDIKPDDLRIETMRAQGAGGQHVNKTESAI 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG+ V Q RSQHKN+A A N+LR+++Y+ E Q+ + + K ++G G Sbjct: 245 RITHIPTGLQVMMQDSRSQHKNRASAMNILRSRIYDAEQQRIDSVR--SAERKEKVGSGD 302 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 +IR+Y P V D R N+ V+ G+ L + + A + Sbjct: 303 RSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGEALGELIDALTTEHQ 350 >gi|314927458|gb|EFS91289.1| peptide chain release factor 1 [Propionibacterium acnes HL044PA1] Length = 388 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 110/343 (32%), Positives = 168/343 (48%), Gaps = 8/343 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +RL + + +P + + L + L + +S + D +L Sbjct: 36 IDEIRRRLREIEIQLANPAVLSDPSAMGRLGKRHARLRHVVSVADNVDQLNADIEAAEDL 95 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D +QE ++ L S D DA +E+H+G GG ES +A Sbjct: 96 --ANEDPVFVQEAERLRGQLDLARTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 153 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192 LLRMYTR+AE+ + L + G ++ + + AYG+LK E GVHR+ R Sbjct: 154 DLLRMYTRYAERVGWSVRELTSELTDLGGYRTVVVAVGGVPSRPAYGYLKHEGGVHRVQR 213 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S+ R HTS + V P VD++ I +D R+D YR+SG GGQ VNTTDSAVR+ Sbjct: 214 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPADIRVDVYRSSGPGGQGVNTTDSAVRL 272 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311 TH+PTG+V CQ ERSQ +NKA+A MLRAK+ L Q+ + + + + + Sbjct: 273 THLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 332 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +R+Y P + D R + +L GDL + + A A + Sbjct: 333 VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGEVLDALHADE 374 >gi|297570956|ref|YP_003696730.1| peptide chain release factor 1 [Arcanobacterium haemolyticum DSM 20595] gi|296931303|gb|ADH92111.1| peptide chain release factor 1 [Arcanobacterium haemolyticum DSM 20595] Length = 370 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 102/349 (29%), Positives = 164/349 (46%), Gaps = 12/349 (3%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 D V + + P + + + L R L +S + + D + E+ Sbjct: 8 DAMVAEYQHIEEQMASPEVLARPEKLRSLGRRYAQLGRVVSRYRTWEKAEADLADIREII 67 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGAGGTESQDWA 134 D + L E + DS DA +EV AG GG ES +A Sbjct: 68 ELGGDDAELFEEELPRLEEAASTAAASLRDALIPRDPDDSRDAIVEVKAGEGGEESALFA 127 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI--------KGPNAYGWLKGEQG 186 L+RMY R+AE + + + L E G K L + + LK E G Sbjct: 128 ADLVRMYQRYAESKGWSVQTLSATHTELGGYKDIQLAVKSSSIPEDPADGVWAHLKFEAG 187 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S R HTS + + V+ VD+ E+++++++ RID +R+SG GGQ VNTT Sbjct: 188 VHRVQRVPATESQGRIHTSAAGVLVFAEVDEPEEVQVADNELRIDVFRSSGPGGQSVNTT 247 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE- 305 DSAVRITH+PTG+ V Q E+SQ KN+ A +L A+L +L+L+++ S+ Sbjct: 248 DSAVRITHLPTGITVSMQDEKSQIKNREAAMRVLLARLRQLQLEEQAAKEADQRRSQVRT 307 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + ++R+Y P + D RT + + VL+G+L+ + + + Sbjct: 308 VDRSERVRTYNF-PENRIADHRTGYKAHNLDAVLNGELEPVITSLREMD 355 >gi|54023021|ref|YP_117263.1| peptide chain release factor 1 [Nocardia farcinica IFM 10152] gi|61214587|sp|Q5Z0Z2|RF1_NOCFA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|54014529|dbj|BAD55899.1| putative peptide chain release factor 1 [Nocardia farcinica IFM 10152] Length = 356 Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats. Identities = 112/329 (34%), Positives = 168/329 (51%), Gaps = 9/329 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ + + L T+ DP L + A+ + + L ++ ++++ D EL Sbjct: 7 IDDILAEHAGLETQLADPTLHNDPSAARRVGKRFAELAPIMATYRKLESARADLTAAREL 66 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A ++ + + + D +D LEV +G GG ES +A Sbjct: 67 AADDASFAAEVPELERQVDELEQALADLL--APRDPHDGDDVVLEVKSGEGGEESALFAA 124 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190 L RMY R+AE+R ++ E L+ + G K ATL IK + K E GVHR+ Sbjct: 125 DLARMYMRYAERRGWRVEVLDATVSDLGGYKEATLSIKSRDAARDGVWSRFKFEGGVHRV 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS + + +YP D+ E++I ESD RID YR+SG GGQ VNTTDSAV Sbjct: 185 QRVPVTESQGRIHTSAAGVLIYPEPDEVAEVQIDESDLRIDVYRSSGKGGQGVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG+VV CQ ERSQ +NKA+A +L A+L L ++ E+ A G +S+ + Sbjct: 245 RITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQALAEEQAEQEAAAGRASQIRTVDRS 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 +IR+Y P + D R + + V Sbjct: 305 ERIRTYNF-PENRITDHRIGYKSHNLDAV 332 >gi|26553517|ref|NP_757451.1| peptide chain release factor 1 [Mycoplasma penetrans HF-2] gi|32171558|sp|Q8EWY5|RF1_MYCPE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|26453523|dbj|BAC43855.1| peptide chain release factor 1 [Mycoplasma penetrans HF-2] Length = 359 Score = 190 bits (481), Expect = 4e-46, Method: Composition-based stats. Identities = 111/344 (32%), Positives = 175/344 (50%), Gaps = 14/344 (4%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 + ++ + LN + E L +V + + + + KE + L D +L Sbjct: 13 SMEEKFNDLNKELETEGL--SVKRMSEINKSIKETTPIVEKFKEYKRTLNDIDSAEKLIK 70 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQDW 133 E D I++ L K +E ++E D + +E+ AGG ES + Sbjct: 71 SEKDNEIIELAQLELSEKKPLIEKYEYELKVLLLPKDPNDDKNVIVEMRPAAGGDESSIF 130 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 L Y R+A+ +K + LE+ + G + +I G N Y +K E GVHR+ R+ Sbjct: 131 VGDLFSAYKRYADSLGWKVKMLEVQESSH-GYGFISFMINGENVYSKMKFESGVHRVQRV 189 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +S R HTS ++ V P + +E+ I+ SD +IDTYRASGAGGQH+N T+SAVRIT Sbjct: 190 PATESKGRVHTSTITVAVLP-ELEEVELVINNSDLKIDTYRASGAGGQHINKTESAVRIT 248 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ-- 311 HIPTG+ V CQ+ +SQ +N+ A MLRAKL+ E ++ E NI + K ++G G + Sbjct: 249 HIPTGIFVACQEGKSQIENRETAMKMLRAKLW--EKKEEENRKNISDLRKGQVGTGERAE 306 Query: 312 -IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IR+Y P V D R N+ +V+ G+L + + + ++ Sbjct: 307 KIRTYNY-PQNRVTDHRINLTLNKLDNVMLGNLSEIIDSLISHD 349 >gi|312601125|gb|ADQ90380.1| Peptide chain release factor 1 [Mycoplasma hyopneumoniae 168] Length = 357 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 111/348 (31%), Positives = 173/348 (49%), Gaps = 7/348 (2%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ Q+ L E + + + + +E + I ++ D Sbjct: 1 MFNSLMKIHQKYQDLKQLLETDQILNDQKQYLQIAKEIASISEIIEVFQKFLDDQKVLED 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127 + ++EDD ++Q + + +E + L + D D +E+ AGG Sbjct: 61 AKTILIQEDDPELIQLAKVEIATMSKNIEEYEKKLLILMLPKDKNDEKDVIVEIRGAAGG 120 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ + L +MY +WA+ +K K + L G I G Y LK E GV Sbjct: 121 DEANIFVGDLFKMYHKWADSQKAKVKVLSSSLALAGGFSQIIFQISGQKIYSKLKFESGV 180 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS +++ V P +D+ IEIEI+ SD +IDTYR+SGAGGQ VNTTD Sbjct: 181 HRVQRVPATETMGRIHTSTATVTVMPKIDEKIEIEINPSDLKIDTYRSSGAGGQSVNTTD 240 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITHIPTG+V Q ERSQ NK A +L++K+Y LELQK+++ + Sbjct: 241 SAVRITHIPTGIVATSQDERSQIGNKEIAMGILKSKIYNLELQKQQQKQSDFRKLAGSGA 300 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N + ++ G+L+ ++A LA +K Sbjct: 301 RSEKIRTYNY-PQDRLTDHRINFSTS-LKPIIQGNLNPIIEALLAQEK 346 >gi|148270549|ref|YP_001245009.1| peptide chain release factor 1 [Thermotoga petrophila RKU-1] gi|147736093|gb|ABQ47433.1| bacterial peptide chain release factor 1 (bRF-1) [Thermotoga petrophila RKU-1] Length = 342 Score = 189 bits (480), Expect = 5e-46, Method: Composition-based stats. Identities = 115/326 (35%), Positives = 172/326 (52%), Gaps = 18/326 (5%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 P L + K E ++ + I++ +L + Sbjct: 11 LLARPDLT--PEQMKNYGMEYAKIEEIENITNRIKETQEFIELL---------REEGENE 59 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + + K + Q LL + A +E+ GAGG E+ +A L RMYTR+AE++ Sbjct: 60 LEIEKYEKELDQLYQELLLLLSSEVGDKAIVEIRPGAGGEEAALFARDLFRMYTRYAERK 119 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 + E EIH+ + GI+ +KG NAYG LK E GVHR+ R+ +S R HTS ++ Sbjct: 120 GWNLEVAEIHETDLGGIREVVFFVKGKNAYGILKYESGVHRVQRVPVTESGGRIHTSTAT 179 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + V P +++ I D +I+T+RASG GGQ+VN T+SAVRITH+PTG+VV CQ ERS Sbjct: 180 VAVLPEIEEKDIE-IRPEDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERS 238 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKD 325 Q++NK A +LRA+LY+L QK ++ I + K++IG G + IR+Y P V D Sbjct: 239 QYQNKQTALRILRARLYQL--QKEQKEREISQKRKSQIGTGERSEKIRTYNF-PQNRVTD 295 Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351 R N ++LDGDLD+ + + Sbjct: 296 HRINYTSYRLQEILDGDLDEIISKLI 321 >gi|54020410|ref|YP_115756.1| peptide chain release factor 1 [Mycoplasma hyopneumoniae 232] gi|61214589|sp|Q601F9|RF1_MYCH2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|53987583|gb|AAV27784.1| peptide chain release factor 1 (RF-1), peptide termination factor [Mycoplasma hyopneumoniae 232] Length = 361 Score = 189 bits (479), Expect = 6e-46, Method: Composition-based stats. Identities = 112/350 (32%), Positives = 174/350 (49%), Gaps = 7/350 (2%) Query: 11 GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 +F+ Q+ L E + + + + +E + I ++ D Sbjct: 3 KKMFNSLMKIHQKYQDLKQLLETDQILNDQKQYLQIAKEIASITEIIEVFQKFLDDQKVL 62 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGA 125 + ++EDD ++Q + + +E + L + D D +E+ A Sbjct: 63 EDAKTILIQEDDPELIQLAKVEIATMSKNIEEYEKKLLILMLPKDKNDEKDVIVEIRGAA 122 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ + L +MY +WA+ +K K + L G I G Y LK E Sbjct: 123 GGDEANIFVGDLFKMYHKWADSQKAKVKVLSSSLALAGGFSQIIFQISGQKIYSKLKFES 182 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ ++ R HTS +++ V P +D+ IEIEI+ SD +IDTYR+SGAGGQ VNT Sbjct: 183 GVHRVQRVPATETMGRIHTSTATVTVMPKIDEKIEIEINPSDLKIDTYRSSGAGGQSVNT 242 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITHIPTG+VV Q ERSQ NK A +L++K+Y LELQK+++ + Sbjct: 243 TDSAVRITHIPTGIVVTSQDERSQIGNKEIAMGILKSKIYNLELQKQQQKQSDFRKLAGS 302 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N + ++ G+L+ ++A LA +K Sbjct: 303 GARSEKIRTYNY-PQDRLTDHRINFSTS-LKPIIQGNLNPIIEALLAQEK 350 >gi|330813117|ref|YP_004357356.1| peptide chain release factor 1 [Candidatus Pelagibacter sp. IMCC9063] gi|327486212|gb|AEA80617.1| peptide chain release factor 1 [Candidatus Pelagibacter sp. IMCC9063] Length = 357 Score = 189 bits (479), Expect = 6e-46, Method: Composition-based stats. Identities = 110/335 (32%), Positives = 170/335 (50%), Gaps = 14/335 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ V R + L + + + E +E + I IK D + D L ++ Sbjct: 7 LESIVNRYNDLESSLSKTDI--DKKEFVKNSKEYSSIGEIIETIKSYIDAIKDKEDLKKI 64 Query: 76 ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 ++D + + + + + + L EAD +A +E+ AG GG E+ Sbjct: 65 LSDKDSDIEIREMAEHDLEEIKSKEQEYEKKVKVFLLPKDEADEKNAIVEIRAGTGGLEA 124 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A+ L MY + + ++ E L + E G K I G N + LK E GVHR+ Sbjct: 125 SLFASDLFNMYQKVSSINGWRVEVLSVSASEAGGYKEIVFTITGKNVFSKLKFESGVHRV 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V + ++++I E+D RID +R+ G GGQ VNTTDSAV Sbjct: 185 QRVPDTETQGRVHTSAATVAVLA-EAEEVDVKIDENDLRIDVFRSGGPGGQSVNTTDSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTGVVV Q E+SQHKNKA+A +LR++LYE E + E ++ K++IG G Sbjct: 244 RITHIPTGVVVAIQDEKSQHKNKAKAMTILRSRLYEAERLRLENERSVA--RKSQIGTGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 +IR+Y P V D R N+ + L GD Sbjct: 302 RSERIRTYNF-PQGRVSDHRINLTLHKLTGFLAGD 335 >gi|145222895|ref|YP_001133573.1| peptide chain release factor 1 [Mycobacterium gilvum PYR-GCK] gi|315443360|ref|YP_004076239.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp. Spyr1] gi|189039980|sp|A4T8L3|RF1_MYCGI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|145215381|gb|ABP44785.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium gilvum PYR-GCK] gi|315261663|gb|ADT98404.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp. Spyr1] Length = 357 Score = 189 bits (479), Expect = 6e-46, Method: Composition-based stats. Identities = 106/324 (32%), Positives = 159/324 (49%), Gaps = 9/324 (2%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 L + DP L + A+ + R + ++ ++++ D ELA ++ Sbjct: 13 AEYGELEQRLADPDLHADAGAARKVGRRFAQISPIVATYRKLEAARGDLEAARELAADDA 72 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140 + + + D++D LEV +G GG ES +A L RM Sbjct: 73 SFAAEVDELTDQIGDLDRALTDLL--APRDPHDADDIVLEVKSGEGGEESALFAADLARM 130 Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRLVRISP 195 Y R+AE+ + L + G K ATL I + LK E GVHR+ R+ Sbjct: 131 YIRYAERHGWTVTMLGETTSDLGGYKDATLSIASKGDSADGVWARLKFEGGVHRVQRVPV 190 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS + + VYP D+ +++I ESD R+D YR+SG GGQ VNTTDSAVRITH+ Sbjct: 191 TESQGRVHTSAAGVLVYPEPDEVEQVQIDESDLRVDVYRSSGKGGQGVNTTDSAVRITHL 250 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRS 314 PTG+VV CQ ERSQ +NKA+A +L A+L L ++ A+ +S+ + +IR+ Sbjct: 251 PTGIVVTCQNERSQLQNKARAMQVLAARLQALAEEQASADASADRASQIRTVDRSERIRT 310 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDV 338 Y P + D R N + + V Sbjct: 311 YNF-PENRIADHRINFKAHNLDQV 333 >gi|328907544|gb|EGG27310.1| peptide chain release factor 1 [Propionibacterium sp. P08] Length = 361 Score = 189 bits (479), Expect = 7e-46, Method: Composition-based stats. Identities = 110/343 (32%), Positives = 168/343 (48%), Gaps = 8/343 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +RL + + +P + + L + L + +S + D +L Sbjct: 9 IDEIRRRLREIEIQLANPAVLSDPSAMGRLGKRHARLRHVVSVADNVDQLNADIEAAEDL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D +QE ++ L S D DA +E+H+G GG ES +A Sbjct: 69 --ANEDPVFVQEAERLRGQLDLARTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 126 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192 LLRMYTR+AE+ + L + G ++ + + AYG+LK E GVHR+ R Sbjct: 127 DLLRMYTRYAERVGWSVRELTSELTDLGGYRTVVVAVGGVPSRPAYGYLKHEGGVHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S+ R HTS + V P VD++ I +D R+D YR+SG GGQ VNTTDSAVR+ Sbjct: 187 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPADIRVDVYRSSGPGGQGVNTTDSAVRL 245 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311 TH+PTG+V CQ ERSQ +NKA+A MLRAK+ L Q+ + + + + + Sbjct: 246 THLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 305 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +R+Y P + D R + +L GDL + + A A + Sbjct: 306 VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGEVLDALHADE 347 >gi|320334062|ref|YP_004170773.1| peptide chain release factor 1 [Deinococcus maricopensis DSM 21211] gi|319755351|gb|ADV67108.1| Peptide chain release factor 1 [Deinococcus maricopensis DSM 21211] Length = 362 Score = 188 bits (478), Expect = 8e-46, Method: Composition-based stats. Identities = 100/351 (28%), Positives = 164/351 (46%), Gaps = 17/351 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72 + DP++ + + + + R + L ++ +E + D L Sbjct: 6 LAALEHEYEQVEAHLADPNIISDQGQYRRVARRHRELTPIVNLWREYCTLDTQARDAREL 65 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 L D + S+ ++ + L + D +D +E+ AGAGG E+ Sbjct: 66 LSDPEMRDLARADLDASEAR--MRAIDTELEVLLLPTDPHDPHDCIVEIRAGAGGDEAAL 123 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A LL MY R+AE K L+ ++ + G+ T + G A+ + E+GVHR+ R Sbjct: 124 FAADLLSMYERYAEGAGLKLAVLDANESDLGGLSKVTFEVTGDGAFRAFRFERGVHRVQR 183 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P V+D+ + S+ RID +R+ GAGGQ VNTTDSAVR Sbjct: 184 VPATETQGRIHTSTVTVAVLPQVEDAEVD-LDLSEVRIDVFRSQGAGGQGVNTTDSAVRA 242 Query: 253 THIP---TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 + P +VV CQ RSQ KN+ +A +LRA+L E E RE A ++G G Sbjct: 243 VYRPGTPDEIVVVCQDGRSQIKNREKALVVLRARLAERERAVRE--AQERADRAAQVGSG 300 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTS--PSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R + + + V+ G L + A + +++ Sbjct: 301 DRSEKIRTYNY-PQNRVTDHRLSGDVKNFPLETVVAGGLAPLIAALVNVER 350 >gi|262201848|ref|YP_003273056.1| peptide chain release factor 1 [Gordonia bronchialis DSM 43247] gi|262085195|gb|ACY21163.1| peptide chain release factor 1 [Gordonia bronchialis DSM 43247] Length = 364 Score = 188 bits (478), Expect = 8e-46, Method: Composition-based stats. Identities = 109/346 (31%), Positives = 172/346 (49%), Gaps = 9/346 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ + + L + DP L + A+ + + L ++ + D EL Sbjct: 15 IDDILAEHAGLEQQLSDPALHDDPAAARRVGKRFAELAPVMATHARLVAARDDLAAAREL 74 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A ++ + ++ D +D LE+ +GAGG ES +A Sbjct: 75 AADDPAFAEEIPALESTVAELDATLTDLL--APRDPHDGDDVVLEIKSGAGGEESALFAA 132 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190 L RMY ++ E+ +K + L + + + G K ATL IK + LK E GVHR+ Sbjct: 133 DLARMYLKYCERHGWKAQVLGVTESDLGGYKEATLSIKAKEAVREGVWSRLKFEGGVHRV 192 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS + + +YP ++ ++ I ESD RID YR+SG GGQ VNTTDSAV Sbjct: 193 QRVPVTESQGRIHTSAAGVLIYPEPEELEQVAIDESDLRIDVYRSSGKGGQGVNTTDSAV 252 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG+VV CQ ERSQ +NKA+A +L A+L ++ + A G +++ + Sbjct: 253 RITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQAAAEEEAQAAAAQGRAAQIRTVDRS 312 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + + VL G++D + A +A + Sbjct: 313 ERIRTYNF-PENRIADHRIGYKANNLDAVLGGEMDGLLDALVAADR 357 >gi|222100202|ref|YP_002534770.1| Peptide chain release factor 1 [Thermotoga neapolitana DSM 4359] gi|221572592|gb|ACM23404.1| Peptide chain release factor 1 [Thermotoga neapolitana DSM 4359] Length = 349 Score = 188 bits (478), Expect = 9e-46, Method: Composition-based stats. Identities = 113/316 (35%), Positives = 170/316 (53%), Gaps = 16/316 (5%) Query: 39 VIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLE 98 E K E L+ S + I++ E ++ + + K Sbjct: 26 PEEMKNYGIEYAKLEEIESVVNRIRETQ---------EFIELLKEEEEDEQEIDRYEKEL 76 Query: 99 VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 Q LL + A +E+ G GG E+ +A L RMYTR+AE++ + E E+H Sbjct: 77 DSLFQELFLLLSPETGDKAIVEIRPGTGGEEAALFARDLFRMYTRYAERKGWDVEIAEMH 136 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 + + G+K A +KG NAY LK E GVHR+ R+ +S R HTS +++ V P +++ Sbjct: 137 ETDLGGVKEAVFFVKGKNAYSILKYESGVHRVQRVPITESGGRIHTSTATVVVLPEIEER 196 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 I D +I+T+RASG GGQ+VN T+SAVRITHIPTG+VV CQ ERSQ++NK A Sbjct: 197 DIE-IRPEDLKIETFRASGHGGQYVNKTESAVRITHIPTGIVVSCQNERSQYQNKQTALR 255 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSP 335 +LRA+LY+L+ ++ E+ + + K++IG G + IR+Y P V D R N Sbjct: 256 ILRARLYQLQREQLEKE--LSQKRKSQIGTGERSEKIRTYNF-PQNRVTDHRINYTSYRL 312 Query: 336 SDVLDGDLDDFMKATL 351 ++LDGDLD+ + + Sbjct: 313 QEILDGDLDEIIAKLI 328 >gi|281205221|gb|EFA79414.1| class I peptide chain release factor [Polysphondylium pallidum PN500] Length = 434 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 141/361 (39%), Positives = 218/361 (60%), Gaps = 10/361 (2%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ----NVIEAKMLMRERQHLDNAIS 57 ++ R ++ L G + + QRL + + + + + +A+ L +E Q L I Sbjct: 76 EVRRIISLLVGGKHYQDKKQRLVLIENELKSNGVESQLSIDNKKAQTL-KECQRLKRDIE 134 Query: 58 FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117 I+E+Q + A +++D S+L E S+ + + + +F+S++SGE D D Sbjct: 135 QIEELQSNFMYYEEISGEAKKKNDQSMLSEMSECISDLYQQSTDLEFKSIMSGENDHEDC 194 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 YLE+HAGAGG +S DW+ +L MY +W++++ FK ++I GE G K A L I+G A Sbjct: 195 YLEIHAGAGGADSMDWSEILSNMYRKWSQRKDFKVTLVDISPGEV-GYKRAILKIEGEFA 253 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 YGW + E GVH+L+R+SP+DS+ +RHTSF+S+ YP VDDSI I++ D I+T R+SG Sbjct: 254 YGWCRSESGVHKLIRLSPFDSSGKRHTSFASVLAYPAVDDSISIDLQTKDLLIETMRSSG 313 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQH N T+SAVRITH PTG+ V +RSQH+NK+ A ++L+AK+ E++KR + Sbjct: 314 PGGQHSNKTESAVRITHTPTGISVAVSDQRSQHQNKSIAMDLLKAKIMASEIKKRAQQEE 373 Query: 298 IGESSKTEIGW-GRQI-RSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353 S GW +I R+Y + P VKD RTN+E + ++L+G +LD F+K L+ Sbjct: 374 SFRSDLGVNGWASDRIVRTYTMHPQTRVKDQRTNLESLNIDEILEGGDELDIFIKTALSQ 433 Query: 354 K 354 K Sbjct: 434 K 434 >gi|13357561|ref|NP_077833.1| peptide chain release factor 1 [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170762199|ref|YP_001752083.1| peptide chain release factor 1 [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171920085|ref|ZP_02690833.2| peptide chain release factor 1 [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|183508605|ref|ZP_02689678.2| peptide chain release factor 1 [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701604|ref|ZP_02553446.2| peptide chain release factor 1 [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|13124459|sp|Q9PRE0|RF1_UREPA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|189039997|sp|B1AHY9|RF1_UREP2 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|11277784|pir||D82945 translation releasing factor RF-1 UU003 [imported] - Ureaplasma urealyticum gi|6898949|gb|AAF30410.1|AE002100_3 peptide chain release factor 1 [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827776|gb|ACA33038.1| peptide chain release factor 1 [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171902439|gb|EDT48728.1| peptide chain release factor 1 [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|182676062|gb|EDT87967.1| peptide chain release factor 1 [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186700834|gb|EDU19116.1| peptide chain release factor 1 [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 359 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 103/362 (28%), Positives = 175/362 (48%), Gaps = 19/362 (5%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 M+ +++L + + L + E + + + K + + + Sbjct: 1 MEYNKKLYEA-----IERVAIKNDALKKELE--TVVTDFKKIKEINIQLKKTTKIAEAFA 53 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSND 116 + + +L + ++ E D +++ +L K+ + + L + D + Sbjct: 54 KYKQKLDTGIAAEKILNTEKDLELIELAQMDLDEAKINIPIIENDLKIMLLPTDPNDDKN 113 Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 +E+ AGG ES + L Y +AE +K + +E+ G + +I G Sbjct: 114 VIVEMRPAAGGDESSIFVGNLFDTYRAYAENNNWKMKIIEMTPNAV-GFSFISFMISGEE 172 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 Y +K E GVHR+ R+ +S R HTS ++ V P D +++ I+ ++ RIDTYRAS Sbjct: 173 VYSRMKFESGVHRVQRVPATESKGRVHTSTITVAVLP-EQDEVDVVINPTELRIDTYRAS 231 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 GAGGQHVN T+SAVRITHIPTGVV CQ+ +SQ +N+ A MLRAKL+E +++ Sbjct: 232 GAGGQHVNRTESAVRITHIPTGVVAACQEGKSQIENRETAMKMLRAKLWEAAQEQQNAEF 291 Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K ++G G +IR+Y P V D R N+ ++ G+LD+ + A +A Sbjct: 292 ANL--RKNQVGTGDRSEKIRTYNY-PQNRVTDHRINLTLNKLDQIMMGELDEIIDALIAD 348 Query: 354 KK 355 ++ Sbjct: 349 EQ 350 >gi|301629497|ref|XP_002943876.1| PREDICTED: peptide chain release factor 1-like [Xenopus (Silurana) tropicalis] Length = 460 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 98/258 (37%), Positives = 146/258 (56%), Gaps = 6/258 (2%) Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159 Q L D+ +A+LE+ AG GG ES +A L R+YTR+A ++ E + ++ Sbjct: 194 NELQRLLLPKDPDDARNAFLEIRAGTGGDESALFAGDLARVYTRYAATVGWRVEIMSANE 253 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 E G K L I+G + YG L+ E G HR+ R+ ++ R HTS ++ V P D+ Sbjct: 254 SELGGYKEVVLRIEGDHVYGALRFESGGHRVQRVPATETQGRIHTSACTVAVMPEPDEQQ 313 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 I ++ +D RIDT+RASGAGGQH+N TDSAVR+ HIPTG+V +CQ RSQH NKA+A + Sbjct: 314 AIMLNPADLRIDTFRASGAGGQHINKTDSAVRVVHIPTGIVAECQDGRSQHSNKAKALQV 373 Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPS 336 L+A++ + E +R A + IG G +IR+Y P D R N+ Sbjct: 374 LQARIQDKERSER--AAKEAAVRRGLIGSGDRSDRIRTYNF-PQGRFTDHRINLTLYKLL 430 Query: 337 DVLDGDLDDFMKATLAIK 354 +++GDL + ++A + Sbjct: 431 AIMEGDLGEVLQALQHAR 448 >gi|224003217|ref|XP_002291280.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220973056|gb|EED91387.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 343 Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats. Identities = 125/343 (36%), Positives = 188/343 (54%), Gaps = 20/343 (5%) Query: 19 AVQRLSFLNTKTEDPHLWQ--NVIEAKMLMRE---RQHLDNAISFIKEIQ-------DRL 66 RL L T+T P W N ++++ RE L + + ++ + L Sbjct: 1 IQSRLQDLETETSSPSFWDASNSDRSEVVTREIGRYTRLKGEMEGWERLRGDALGALELL 60 Query: 67 CDNLI------LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 D L E +E +E + Q++ + + + ++LLSG DS L+ Sbjct: 61 QDLLDGSSGGDNFEEDEDEMILLTFEECQSSAQKLLEQSQKYELQTLLSGPYDSAQCTLQ 120 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + AGAGGTE+ DW +ML RMY R A+ +K LE G+ G KS LL++G NAYGW Sbjct: 121 LTAGAGGTEACDWVSMLYRMYMRHAQFMDYKVTVLEESVGDVVGYKSVELLVEGVNAYGW 180 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP--VVDDSIEIEISESDCRIDTYRASGA 238 KGE+G HRLVR+SP+++N++R T+F+ + V P EI+I E + I T R+ G Sbjct: 181 FKGEKGAHRLVRLSPFNANNKRQTTFAGVDVIPLLEEGTVSEIDIPEKELEITTMRSGGK 240 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ+VN ++ VR+ HIP+G+ ++C QERSQ +NK A L+ +L + +++ + N Sbjct: 241 GGQNVNKVETGVRVKHIPSGIAIKCTQERSQSQNKQIALTRLKGQLLVIAQEQQLQSINA 300 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 E WG QIR+YV+QPY+MVKD R+ E + VLDG Sbjct: 301 IRGDIVEASWGAQIRNYVMQPYKMVKDARSGWETSDVEGVLDG 343 >gi|226492409|ref|NP_001142228.1| hypothetical protein LOC100274396 [Zea mays] gi|194707706|gb|ACF87937.1| unknown [Zea mays] Length = 416 Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 124/345 (35%), Positives = 187/345 (54%), Gaps = 15/345 (4%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 QR ++L + P + E +E + L++ + IK+++ + + L L Sbjct: 68 IEQRSAYLQEQINQPA--ASPEEYSRANKEFRKLESTMELIKDLRSKQEEIEGLKSLVAN 125 Query: 79 EDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 + + ++E ++ + K L EAD D LEV AG GG E+ + Sbjct: 126 DHEEKDMREMAEEELLVAVEEEKRLQHELFRSLLPKDEADEKDCILEVRAGTGGEEASLF 185 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A + RMY ++A+K +K + ++I + G K A+ I GP A+G LK E G+HR+ R+ Sbjct: 186 AMDIFRMYEKYAQKNGWKFDVIDIMESAVKGYKEASGTISGPGAFGKLKFESGIHRVQRV 245 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 + + R HTS S+ V P D +++++ D RIDTYR+ G+GGQ VNTTDSAVRIT Sbjct: 246 PATEKSGRMHTSAVSVAVLPQ-ADEVDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRIT 304 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 HIPTG VV Q ERSQH NKA+A +LRA+LYELE ++ + S +IG G Sbjct: 305 HIPTGTVVAIQDERSQHMNKAKALKVLRARLYELERRRLHMDRSKLRSE--QIGSGDRSE 362 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354 +IR+Y P V D R + S +DV++G+ LD F+ A L + Sbjct: 363 RIRTYNF-PQGRVTDHRVGVTHHSIADVMEGESLDMFVDALLLQE 406 >gi|71893491|ref|YP_278937.1| peptide chain release factor 1 [Mycoplasma hyopneumoniae J] gi|119361562|sp|Q4AAJ5|RF1_MYCHJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|71851618|gb|AAZ44226.1| peptide chain release factor RF-1 [Mycoplasma hyopneumoniae J] Length = 361 Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats. Identities = 112/350 (32%), Positives = 173/350 (49%), Gaps = 7/350 (2%) Query: 11 GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 +F+ Q+ L E + + + + +E + I ++ D Sbjct: 3 KKMFNSLMKIHQKYQDLKQLLETDQILNDQKQYLQIAKEIASISEIIEVFQKFLDDQKVL 62 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGA 125 + ++EDD ++Q + + +E + L + D D +E+ A Sbjct: 63 EDAKTILIQEDDPELIQLAKVEIATMSKNIEEYEKKLLILMLPKDKNDEKDVIVEIRGAA 122 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ + L +MY +WA+ +K K + L G I G Y LK E Sbjct: 123 GGDEANIFVGDLFKMYHKWADSQKAKVKVLSSSLALAGGFSQIIFQISGQKIYSKLKFES 182 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ ++ R HTS +++ V P +D+ IEIEI+ SD +IDTYR+SGAGGQ VNT Sbjct: 183 GVHRVQRVPATETMGRIHTSTATVTVMPKIDEKIEIEINPSDLKIDTYRSSGAGGQSVNT 242 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITHIPTG+VV Q ERSQ NK A +L++K+Y LELQK+++ + Sbjct: 243 TDSAVRITHIPTGIVVTSQDERSQIGNKEIAMGILKSKIYNLELQKQQQKQSDFRKLAGS 302 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N + ++ G L+ ++A LA +K Sbjct: 303 GARSEKIRTYNY-PQDRLTDHRINFSTS-LKPIIQGSLNPIIEALLAQEK 350 >gi|317506166|ref|ZP_07963987.1| peptide chain release factor 1 protein [Segniliparus rugosus ATCC BAA-974] gi|316255511|gb|EFV14760.1| peptide chain release factor 1 protein [Segniliparus rugosus ATCC BAA-974] Length = 354 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 123/346 (35%), Positives = 176/346 (50%), Gaps = 15/346 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + L + DP L ++V AK + + L + ++ +L Sbjct: 5 LDELIAEYESLQERWADPSLQEDVAAAKKVGKRVAELAPIYEAHAQ-REAAQADLAAAHE 63 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 E D +E RI E D D LEV AGAGG ES +A Sbjct: 64 LAELDPEFAKEEVERLTGRISELDEELDELLAPRDPHDGEDVVLEVKAGAGGEESALFAG 123 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG--------PNAYGWLKGEQGV 187 L+RMYT++AE+R+++ E L I + + G+K AT+ IK + WLK E GV Sbjct: 124 DLIRMYTKFAERRRWRVEVLSIAESDLGGVKDATISIKRTGGDQSPAQGVWAWLKHEGGV 183 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS + + YP +D+ E+ I ES+ RID YR+SG GGQ VNTTD Sbjct: 184 HRVQRVPATESQGRIHTSAAGVLAYPEPEDAPEVVIDESELRIDVYRSSGKGGQGVNTTD 243 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI- 306 SAVRITH+PTG+VV CQ ERSQ +NKA+A +L A+L +L +K A+ K +I Sbjct: 244 SAVRITHLPTGLVVTCQNERSQLQNKARAMVVLAARLEQLREEK--AAADAASGRKEQIR 301 Query: 307 --GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P + D R + ++ VL+GDL+ + Sbjct: 302 TVDRSERIRTYNF-PENRIADHRIGYKASNLDMVLEGDLEPMLSEL 346 >gi|72080478|ref|YP_287536.1| peptide chain release factor 1 [Mycoplasma hyopneumoniae 7448] gi|119361561|sp|Q4A8M6|RF1_MYCH7 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|71913602|gb|AAZ53513.1| peptide chain release factor RF-1 [Mycoplasma hyopneumoniae 7448] Length = 361 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 112/350 (32%), Positives = 173/350 (49%), Gaps = 7/350 (2%) Query: 11 GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 +F+ Q+ L E + + + + +E + I ++ D Sbjct: 3 KKMFNSLMKIHQKYQDLKQLLETDQILNDQKQYLQIAKEIASITEIIEVFQKFLDDQKVL 62 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGA 125 + ++EDD ++Q + + +E + L + D D +E+ A Sbjct: 63 EDAKTILIQEDDPELIQLAKVEIATMSKNIEEYEKKLLILMLPKDKNDEKDVIVEIRGAA 122 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ + L +MY +WA+ +K K + L G I G Y LK E Sbjct: 123 GGDEANIFVGDLFKMYHKWADSQKAKVKVLSSSLALAGGFSQIIFQISGQKIYSKLKFES 182 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ ++ R HTS +++ V P +D+ IEIEI+ SD +IDTYR+SGAGGQ VNT Sbjct: 183 GVHRVQRVPATETMGRIHTSTATVTVMPKIDEKIEIEINPSDLKIDTYRSSGAGGQSVNT 242 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITHIPTG+VV Q ERSQ NK A +L++K+Y LELQK+++ + Sbjct: 243 TDSAVRITHIPTGIVVTSQDERSQIGNKEIAMGILKSKIYNLELQKQQQKQSDFRKLAGS 302 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R N + ++ G L+ ++A LA +K Sbjct: 303 GARSEKIRTYNY-PQDRLTDHRINFSTS-LKPIIQGSLNPIIEALLAQEK 350 >gi|195973766|gb|ACG63448.1| peptide chain release factor 2 [Francisella philomiragia] Length = 294 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 154/296 (52%), Positives = 207/296 (69%), Gaps = 3/296 (1%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 + ED +W N A+ L R++ L+N + + I + L + L L E+D S++QE Sbjct: 2 ELEDGSIWNNPEYAQNLGRQKVELENVVHNCEYISETLE--TLTELLELAEEDESLMQEI 59 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + + Q + E+E +F + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ Sbjct: 60 AKDTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK ++ DG+ AGIK TL I+G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 QHKN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL +K Sbjct: 240 QHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIK 294 >gi|65317305|ref|ZP_00390264.1| COG0216: Protein chain release factor A [Bacillus anthracis str. A2012] Length = 323 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 110/317 (34%), Positives = 169/317 (53%), Gaps = 11/317 (3%) Query: 46 MRERQHLDNAISFIKEIQD---RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 ++ + + +E +D L D +LE L+ + +++E L+ + + + Sbjct: 3 IQRNXDIQETVEVYREYKDVREXLKDAKAMLEDKLDAEMREMVKEEVSELESQEKTLSER 62 Query: 103 -QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 + + D + +EV AGG E+ +A L RMY+R+AE + +KTE +E E Sbjct: 63 LKILLVPKDPNDDKNVIVEVRGAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTE 122 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 G K +I G A+ LK E G HR+ R+ +S R HTS +++ V P + +EI Sbjct: 123 LGGYKEIIFMINGKGAFAKLKFENGAHRVQRVPETESGGRIHTSTATVAVLP-EAEEVEI 181 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 +I E D R+DT+ +SG GGQ VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A +LR Sbjct: 182 DIHEKDVRVDTFASSGPGGQSVNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLR 241 Query: 282 AKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 A++Y+ Q E A ++ K +G G +IR+Y P V D R + + Sbjct: 242 ARVYDKFRQ--EAQAEYDQNRKQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQI 298 Query: 339 LDGDLDDFMKATLAIKK 355 L G LDDF+ A + + Sbjct: 299 LQGKLDDFINALVMEDQ 315 >gi|315080405|gb|EFT52381.1| peptide chain release factor 1 [Propionibacterium acnes HL078PA1] Length = 361 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 109/343 (31%), Positives = 166/343 (48%), Gaps = 8/343 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +RL + T+ D + + L + L + +S + D +L Sbjct: 9 IDEVRRRLREIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D + E ++ L S D DA +E+H+G GG ES +A Sbjct: 69 TE--EDPAFGLEAERLRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 126 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192 LLRMYTR+AE+ + L + G ++ + + YG+LK E GVHR+ R Sbjct: 127 DLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPVYGYLKHEGGVHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S+ R HTS + V P VD++ I ++ R+D YR+SG GGQ VNTTDSAVR+ Sbjct: 187 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPAEVRVDVYRSSGPGGQGVNTTDSAVRL 245 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311 TH+PTG+V CQ ERSQ +NKA+A MLRAK+ L Q+ + + + + + Sbjct: 246 THLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 305 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +R+Y P + D R + +L GDL D + A A + Sbjct: 306 VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 347 >gi|195973762|gb|ACG63446.1| peptide chain release factor 2 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|195973768|gb|ACG63449.1| peptide chain release factor 2 [Francisella philomiragia] Length = 294 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 153/296 (51%), Positives = 207/296 (69%), Gaps = 3/296 (1%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 + ED +W N A+ L R++ L+N + + I + L + L L E+D S++QE Sbjct: 2 ELEDGSIWDNPEYAQNLGRQKVELENVVHNCEYISETLE--TLTELLELAEEDESLMQEI 59 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + + Q + E+E +F + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ Sbjct: 60 AKDTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK ++ DG+ AGIK TL ++G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKVEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 QHKN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL +K Sbjct: 240 QHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIK 294 >gi|50842731|ref|YP_055958.1| peptide chain release factor 1 [Propionibacterium acnes KPA171202] gi|289425142|ref|ZP_06426919.1| peptide chain release factor 1 [Propionibacterium acnes SK187] gi|295130812|ref|YP_003581475.1| peptide chain release factor 1 [Propionibacterium acnes SK137] gi|50840333|gb|AAT83000.1| peptide chain release factor 1 [Propionibacterium acnes KPA171202] gi|289154120|gb|EFD02808.1| peptide chain release factor 1 [Propionibacterium acnes SK187] gi|291375831|gb|ADD99685.1| peptide chain release factor 1 [Propionibacterium acnes SK137] gi|313764216|gb|EFS35580.1| peptide chain release factor 1 [Propionibacterium acnes HL013PA1] gi|313772062|gb|EFS38028.1| peptide chain release factor 1 [Propionibacterium acnes HL074PA1] gi|313791908|gb|EFS40009.1| peptide chain release factor 1 [Propionibacterium acnes HL110PA1] gi|313810262|gb|EFS47983.1| peptide chain release factor 1 [Propionibacterium acnes HL083PA1] gi|313812711|gb|EFS50425.1| peptide chain release factor 1 [Propionibacterium acnes HL025PA1] gi|313816309|gb|EFS54023.1| peptide chain release factor 1 [Propionibacterium acnes HL059PA1] gi|313818790|gb|EFS56504.1| peptide chain release factor 1 [Propionibacterium acnes HL046PA2] gi|313820562|gb|EFS58276.1| peptide chain release factor 1 [Propionibacterium acnes HL036PA1] gi|313822633|gb|EFS60347.1| peptide chain release factor 1 [Propionibacterium acnes HL036PA2] gi|313827397|gb|EFS65111.1| peptide chain release factor 1 [Propionibacterium acnes HL063PA2] gi|313830592|gb|EFS68306.1| peptide chain release factor 1 [Propionibacterium acnes HL007PA1] gi|313833628|gb|EFS71342.1| peptide chain release factor 1 [Propionibacterium acnes HL056PA1] gi|313838323|gb|EFS76037.1| peptide chain release factor 1 [Propionibacterium acnes HL086PA1] gi|314915694|gb|EFS79525.1| peptide chain release factor 1 [Propionibacterium acnes HL005PA4] gi|314917937|gb|EFS81768.1| peptide chain release factor 1 [Propionibacterium acnes HL050PA1] gi|314920320|gb|EFS84151.1| peptide chain release factor 1 [Propionibacterium acnes HL050PA3] gi|314924927|gb|EFS88758.1| peptide chain release factor 1 [Propionibacterium acnes HL036PA3] gi|314931540|gb|EFS95371.1| peptide chain release factor 1 [Propionibacterium acnes HL067PA1] gi|314957925|gb|EFT02028.1| peptide chain release factor 1 [Propionibacterium acnes HL002PA1] gi|314960548|gb|EFT04650.1| peptide chain release factor 1 [Propionibacterium acnes HL002PA2] gi|314962564|gb|EFT06664.1| peptide chain release factor 1 [Propionibacterium acnes HL082PA1] gi|314967573|gb|EFT11672.1| peptide chain release factor 1 [Propionibacterium acnes HL037PA1] gi|314973593|gb|EFT17689.1| peptide chain release factor 1 [Propionibacterium acnes HL053PA1] gi|314975815|gb|EFT19910.1| peptide chain release factor 1 [Propionibacterium acnes HL045PA1] gi|314983706|gb|EFT27798.1| peptide chain release factor 1 [Propionibacterium acnes HL005PA1] gi|314987887|gb|EFT31978.1| peptide chain release factor 1 [Propionibacterium acnes HL005PA2] gi|314989698|gb|EFT33789.1| peptide chain release factor 1 [Propionibacterium acnes HL005PA3] gi|315084734|gb|EFT56710.1| peptide chain release factor 1 [Propionibacterium acnes HL027PA2] gi|315085418|gb|EFT57394.1| peptide chain release factor 1 [Propionibacterium acnes HL002PA3] gi|315095866|gb|EFT67842.1| peptide chain release factor 1 [Propionibacterium acnes HL038PA1] gi|315098771|gb|EFT70747.1| peptide chain release factor 1 [Propionibacterium acnes HL059PA2] gi|315101459|gb|EFT73435.1| peptide chain release factor 1 [Propionibacterium acnes HL046PA1] gi|315105832|gb|EFT77808.1| peptide chain release factor 1 [Propionibacterium acnes HL030PA1] gi|315108751|gb|EFT80727.1| peptide chain release factor 1 [Propionibacterium acnes HL030PA2] gi|327326418|gb|EGE68208.1| peptide chain release factor 1 [Propionibacterium acnes HL096PA2] gi|327329874|gb|EGE71628.1| peptide chain release factor 1 [Propionibacterium acnes HL097PA1] gi|327445686|gb|EGE92340.1| peptide chain release factor 1 [Propionibacterium acnes HL043PA2] gi|327448330|gb|EGE94984.1| peptide chain release factor 1 [Propionibacterium acnes HL043PA1] gi|327450545|gb|EGE97199.1| peptide chain release factor 1 [Propionibacterium acnes HL087PA3] gi|327453373|gb|EGF00028.1| peptide chain release factor 1 [Propionibacterium acnes HL092PA1] gi|328753199|gb|EGF66815.1| peptide chain release factor 1 [Propionibacterium acnes HL025PA2] gi|328753962|gb|EGF67578.1| peptide chain release factor 1 [Propionibacterium acnes HL087PA1] gi|328754695|gb|EGF68311.1| peptide chain release factor 1 [Propionibacterium acnes HL020PA1] gi|328760891|gb|EGF74456.1| peptide chain release factor 1 [Propionibacterium acnes HL099PA1] Length = 361 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 110/343 (32%), Positives = 167/343 (48%), Gaps = 8/343 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +RL + T+ D + + L + L + +S + D +L Sbjct: 9 IDEVRRRLREIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D + E ++ L S D DA +E+H+G GG ES +A Sbjct: 69 TE--EDPAFGLEAERLRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 126 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192 LLRMYTR+AE+ + L + G ++ + + AYG+LK E GVHR+ R Sbjct: 127 DLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGGVHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S+ R HTS + V P VD++ I ++ R+D YR+SG GGQ VNTTDSAVR+ Sbjct: 187 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPAEVRVDVYRSSGPGGQGVNTTDSAVRL 245 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311 TH+PTG+V CQ ERSQ +NKA+A MLRAK+ L Q+ + + + + + Sbjct: 246 THLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 305 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +R+Y P + D R + +L GDL D + A A + Sbjct: 306 VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 347 >gi|308805082|ref|XP_003079853.1| COG0216: Protein chain release factor A (ISS) [Ostreococcus tauri] gi|116058310|emb|CAL53499.1| COG0216: Protein chain release factor A (ISS) [Ostreococcus tauri] Length = 1134 Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats. Identities = 116/343 (33%), Positives = 177/343 (51%), Gaps = 15/343 (4%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 + A +R L P + +E LD + ++ + L ELA Sbjct: 549 EAATKRHDELIALISAPDAA--IDRVIEANKELARLDPLVKQYSMVKSLRDERESLDELA 606 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQD 132 D+ I + + L+ I ++ ++ L +AD A LEV AGAGG E+ Sbjct: 607 RTSDEKDITELAREELRAIDAKLPEQEHALRIMLLPRDDADDRGAILEVRAGAGGDEAAL 666 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY A K ++ E L + + + GI+ + + G +G LK E GVHR+ R Sbjct: 667 FAAELFRMYALHARKSGWRFETLNMSETDGKGIREGSAEVLGDGVFGRLKFESGVHRVQR 726 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS +S+ V P + ++++I + D RI+T RASGAGGQHVNTT+SAVR+ Sbjct: 727 VPETETQGRVHTSTASVAVLPHAAE-VDMDIRDEDVRIETMRASGAGGQHVNTTNSAVRL 785 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+ V Q ERSQHKNKA+A+++L+++LY++E +K S + IG G Sbjct: 786 THLPTGITVAIQDERSQHKNKAKAFSVLKSRLYDMEREKLANERAELRS--SLIGTGDRS 843 Query: 310 RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGD-LDDFMKAT 350 ++R+Y P VKD R +DG LDD + Sbjct: 844 EKVRTYNF-PQGRVKDHRVDGNVSGDIKGFMDGFLLDDLVDKL 885 >gi|256370731|ref|YP_003108556.1| peptide chain release factor 2 [Candidatus Sulcia muelleri SMDSEM] gi|256009523|gb|ACU52883.1| peptide chain release factor 2 [Candidatus Sulcia muelleri SMDSEM] Length = 360 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 117/343 (34%), Positives = 199/343 (58%), Gaps = 5/343 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KLS ++ + + + L K P W+N ++K +++ ++ Sbjct: 9 KLSNKIKEISISLEIKKKISFLKKEEKKLMSPFFWKNKKQSKKIIKSLSETKKWLNTFNL 68 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +++ D IL ++ + I+ + + ++ + D+++A L++ Sbjct: 69 LKESFNDLKILFFYFKSGEETELEINNLLKK--IENLISKIELKNFFFEKEDASNAVLQI 126 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGGTES DW +ML RMY WAEK FK + L G+ G KS T +KG +G+L Sbjct: 127 SAGAGGTESCDWVSMLYRMYFLWAEKNNFKIKKLNSLQGDIIGFKSITFEVKGFYPFGYL 186 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE GVHRLVRISP+D++ R HTSF+S+++YP++ + ++I SD DT+R+ GAGGQ Sbjct: 187 KGENGVHRLVRISPFDNSKR-HTSFASVYIYPLIKKDLNLDIKASDITWDTFRSGGAGGQ 245 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN ++ VR+ H PT ++++ + RSQ +NK +A +L+++LY +E QK + + Sbjct: 246 NVNKVETGVRLHHRPTNIIIENSETRSQIQNKNKALKLLKSRLYYIEKQKL--FKSKMKF 303 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 +K +I WG QIR+Y++ PY++VKD++T E + VL+G+++ Sbjct: 304 NKKKIEWGSQIRNYIMHPYKLVKDIKTGYETSDIHSVLNGEIN 346 >gi|195973770|gb|ACG63450.1| peptide chain release factor 2 [Francisella philomiragia] Length = 294 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 154/296 (52%), Positives = 207/296 (69%), Gaps = 3/296 (1%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 + ED +W N A+ L R++ L+N + + I + L + L L E+D S++QE Sbjct: 2 ELEDGSIWDNPEYAQNLGRQKVELENVVHNCEYISETLE--TLTELLELAEEDESLMQEI 59 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + + Q + E+E +F + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ Sbjct: 60 AKDTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK ++ DG+ AGIK TL I+G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 QHKN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL +K Sbjct: 240 QHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIK 294 >gi|195973774|gb|ACG63452.1| peptide chain release factor 2 [Francisella noatunensis] gi|198417115|gb|ACH87844.1| PrfB [Francisella noatunensis subsp. noatunensis] Length = 294 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 153/296 (51%), Positives = 207/296 (69%), Gaps = 3/296 (1%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 + ED +W N A+ L R++ L+N + + I + L + L L E+D S++QE Sbjct: 2 ELEDGSIWDNPEYAQNLGRQKVELENIVHNCEHISETLE--TLTELLELAEEDESLMQEI 59 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + + Q + E+E +F + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ Sbjct: 60 AKDTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK ++ DG+ AGIK TL I+G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 +++ P VDD I+IEI+ +D R+DTYRASGAGGQH+N TDSAVRITHIPT +VVQ Q +RS Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHINKTDSAVRITHIPTNIVVQSQSDRS 239 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 QHKN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL +K Sbjct: 240 QHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIK 294 >gi|171920548|ref|ZP_02695589.3| peptide chain release factor 1 [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|185178800|ref|ZP_02554523.2| peptide chain release factor 1 [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024350|ref|ZP_02570606.2| peptide chain release factor 1 [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518435|ref|ZP_02556548.2| peptide chain release factor 1 [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188524208|ref|ZP_02557610.2| peptide chain release factor 1 [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195867475|ref|ZP_03079479.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273256|ref|ZP_03205792.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|225550782|ref|ZP_03771731.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551438|ref|ZP_03772384.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|171903245|gb|EDT49534.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|184209423|gb|EDU06466.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188018616|gb|EDU56656.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188998234|gb|EDU67331.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195660120|gb|EDX53500.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660951|gb|EDX54204.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249776|gb|EDY74556.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|225379253|gb|EEH01618.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225379936|gb|EEH02298.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 359 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 104/362 (28%), Positives = 174/362 (48%), Gaps = 19/362 (5%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 M+ +++L + + L + E + + + K + + + Sbjct: 1 MEYNKKLYEA-----IERVAVKNKTLKQELE--TITSDFKKIKEINIQLKKTTKIAEAFA 53 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSND 116 + + ++ ++ EL E D +++ +L K + + L + D + Sbjct: 54 KYKQKIDAGIVAEELLNTEKDLELVELAQMDLDDAKASIPVIENELKIMLLPTDPNDDKN 113 Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 +E+ AGG ES + L Y + E +K + +E+ G + +I G Sbjct: 114 VIVEMRPAAGGDESSIFVGNLFDTYRAYTESNNWKMKIIEMTPNAV-GFSFISFMISGEE 172 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 Y +K E GVHR+ R+ +S R HTS ++ V P D +++ I+ SD RIDTYRAS Sbjct: 173 VYSRMKFESGVHRVQRVPATESKGRVHTSTITVAVLP-EQDEVDVVINPSDLRIDTYRAS 231 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 GAGGQHVN T+SAVRITHIPTGVV CQ+ +SQ +N+ A MLRAKL+E +++ Sbjct: 232 GAGGQHVNRTESAVRITHIPTGVVAACQEGKSQIENRETAMKMLRAKLWEAAQEQQNAEF 291 Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K ++G G +IR+Y P V D R ++ ++ G+LD+ + A +A Sbjct: 292 ANL--RKNQVGTGDRSEKIRTYNY-PQNRVTDHRISLTLNKLDQIMMGELDEIIDALIAD 348 Query: 354 KK 355 ++ Sbjct: 349 EQ 350 >gi|168203426|gb|ACA21561.1| protein release factor class I [Candidatus Pelagibacter ubique] Length = 356 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 111/344 (32%), Positives = 177/344 (51%), Gaps = 15/344 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + + L + + +E L+ I+ K+ D L ++ Sbjct: 7 IEELINKHMQLEKDLSSDKI--DKKLFAEKSKEYSDLNEIIADAKKYLSFENDKTELKKI 64 Query: 76 ALEEDDC-----SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 +++ E D + + + + L EAD +A +E+ AG GG E+ Sbjct: 65 LEDQNSDEELLKMAETEIKDLQIQFEKNEKKLKLFLLPRDEADKKNAIIEIRAGTGGLEA 124 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L +MY + + K+K+ E + I E G+K IKG N Y LK E GVHR+ Sbjct: 125 SLFAGDLFKMYEKVSHKKKWLVEIISISKSEAGGLKEVIASIKGTNIYSTLKYESGVHRV 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + ++++I++SD RID +RA G GGQ VNTTDSAV Sbjct: 185 QRVPDTETQGRVHTSAATVAVLP-EAEEVDLKINDSDLRIDVFRAGGPGGQSVNTTDSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG+ V Q E+SQHKNKA+ +LRA+LYELE + ++ + K++IG G Sbjct: 244 RITHIPTGLSVSQQDEKSQHKNKAKGMKILRARLYELERTRIDQERSQ--DRKSKIGTGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350 +IR+Y P V D R N+ + L+G+ D+ +++ Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTIHKLEEFLEGEAFDEMIESL 344 >gi|195973764|gb|ACG63447.1| peptide chain release factor 2 [Francisella philomiragia] Length = 294 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 150/296 (50%), Positives = 200/296 (67%), Gaps = 3/296 (1%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 + ED +W N A+ L R++ L+N + + I + L LLELA E++ Sbjct: 2 ELEDGSIWDNPEYAQNLGRQKVELENVVHNCEYISETLETLTELLELAEEDESLMQEIAK 61 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++ E +F + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ Sbjct: 62 DTQEVTAEI--EKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK ++ DG+ AGIK TL ++G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKVEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 QHKN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL +K Sbjct: 240 QHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIK 294 >gi|326561958|gb|EGE12292.1| peptide chain release factor 1 [Moraxella catarrhalis 103P14B1] Length = 319 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 110/314 (35%), Positives = 158/314 (50%), Gaps = 7/314 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V R + DP + + + L E L + ++ D EL Sbjct: 9 LDQMVDRFEEVTALLSDPDTISDNKKFRELSMEHSDLSEITTTWQDFVQAEADLQTANEL 68 Query: 76 ALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + E I+ E L D A+LE+ AG GG E+ ++ Sbjct: 69 LSDPEMKEMALDEIEVARANIETLEERLNVMMLPKDPNDKATAFLEIRAGTGGDEAAIFS 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY ++ + + ++ E L ++GE G K + G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYQKYTQSQGWQVEVLSANEGEHGGYKEIIARVSGIGVYGRLKFESGAHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P V+ +EI+ SD RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 189 ATESQGRVHTSACTVAVMPEVEIDDTVEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 IPTGVV +CQQERSQH NK +A ML A++ + ++Q +I + + +G G + Sbjct: 249 IPTGVVAECQQERSQHANKEKAMKMLVARIQQAKVQ--AQIDATSDMRRNLVGSGDRSER 306 Query: 312 IRSYVLQPYQMVKD 325 IR+Y P + D Sbjct: 307 IRTYNF-PQGRMTD 319 >gi|295111639|emb|CBL28389.1| peptide chain release factor 2 [Synergistetes bacterium SGP1] Length = 224 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 126/219 (57%), Positives = 161/219 (73%) Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 MLLRMY R+AE+ K LE + EEAGIKSAT++++G NAYG+LK E+GVHRLVRISP Sbjct: 1 MLLRMYLRYAERDGLKATVLEATNDEEAGIKSATVMMEGDNAYGFLKAERGVHRLVRISP 60 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +DS RRHTSF+S+ V P D ++++I D ++DTYRASGAGGQ+VN TDSA+RITH+ Sbjct: 61 FDSAHRRHTSFASVLVTPEFSDDVDVDIRPEDLKVDTYRASGAGGQYVNRTDSAIRITHL 120 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315 PTG+VV CQ ERSQH N+ A ++LR+KLYE LQ+R++ K E WG QIRSY Sbjct: 121 PTGIVVTCQNERSQHMNRQVAMHVLRSKLYERALQERQDELASVVGDKKETTWGSQIRSY 180 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 VL PY +VKD RT +EK + VLDGD+DDF+ L + Sbjct: 181 VLHPYTLVKDHRTGLEKGNAQAVLDGDIDDFIMEYLRFR 219 >gi|225624841|gb|ACN96555.1| PrfB [Francisella noatunensis subsp. orientalis] Length = 294 Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 149/296 (50%), Positives = 198/296 (66%), Gaps = 3/296 (1%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 + ED +W N A+ L R++ L+N + + I + L LLELA E++ Sbjct: 2 ELEDGSIWDNPEYAQNLGRQKVELENVVHNCEHISETLETLTELLELAEEDESLIQEIAK 61 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++ E +F + SG+ D N+ +L + +G+GGTE+QDWA ML+RMY RWA+ + Sbjct: 62 DTQDVTAEI--EKLEFRRMFSGQMDPNNVFLNIQSGSGGTEAQDWAEMLMRMYMRWADSQ 119 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK ++ DG+ AGIK TL I+G AYGW + E G+HRLVR SP+DSNS+RHTSF+S Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWFRTETGIHRLVRKSPFDSNSKRHTSFAS 179 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 QHKN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL +K Sbjct: 240 QHKNRDSAMKQLKSKLYEMELQKRNAEKNDLEDSKADIGWGSQIRSYVLD-QSRIK 294 >gi|262277608|ref|ZP_06055401.1| peptide chain release factor 1 [alpha proteobacterium HIMB114] gi|262224711|gb|EEY75170.1| peptide chain release factor 1 [alpha proteobacterium HIMB114] Length = 355 Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 115/335 (34%), Positives = 170/335 (50%), Gaps = 14/335 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL-ILLE 74 + R L + + +E + + I +K + D Sbjct: 7 VKEIISRYETLEKTLSQTDI--DKNTYVKNSKEYSSIGDIIIDVKNYIKMVEDKEGSEKI 64 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTES 130 L + D + + L IK ++ + + L EAD +A +E+ AG GG E+ Sbjct: 65 LEDKSADKELKEMAELELNEIKEKIGDLETKIKIFMLPKDEADEKNAIIEIRAGTGGLEA 124 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L MY + A +KTE + I D + G K + G N + LK E GVHR+ Sbjct: 125 SLFAGDLFEMYQKVASNNGWKTEIISISDSDAGGYKEVVFSVTGKNVFSKLKFESGVHRV 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + ++++I E++ RID +R+SG GGQ VNTTDSAV Sbjct: 185 QRVPKTETQGRVHTSAATVAVLP-EAEDVDVKIDENELRIDVFRSSGPGGQSVNTTDSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIP+G+VV Q E+SQHKNKA+A +LR+KLYELE K E+ + K++IG G Sbjct: 244 RITHIPSGIVVSQQDEKSQHKNKAKALKILRSKLYELERSKLEKER--SSARKSQIGSGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 +IR+Y P V D R N+ SD L GD Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLHKLSDFLSGD 335 >gi|313801610|gb|EFS42850.1| peptide chain release factor 1 [Propionibacterium acnes HL110PA2] Length = 361 Score = 186 bits (473), Expect = 4e-45, Method: Composition-based stats. Identities = 111/343 (32%), Positives = 167/343 (48%), Gaps = 8/343 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +RL + T+ D + + L R L + +S + D +L Sbjct: 9 IDEVRRRLREIETQLADSAVLSDPSAMGRLGRRHARLRHVVSVADRVDQLRADVEAAEDL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D + E ++ L S D DA +E+H+G GG ES +A Sbjct: 69 TE--EDPAFGLEAERLRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 126 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192 LLRMYTR+AE+ + L + G ++ + + AYG+LK E GVHR+ R Sbjct: 127 DLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGGVHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S+ R HTS + V P VD++ I ++ R+D YR+SG GGQ VNTTDSAVR+ Sbjct: 187 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPAEVRVDVYRSSGPGGQGVNTTDSAVRL 245 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311 TH+PTG+V CQ ERSQ +NKA+A MLRAK+ L Q+ + + + + + Sbjct: 246 THLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 305 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +R+Y P + D R + +L GDL D + A A + Sbjct: 306 VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 347 >gi|297182853|gb|ADI19004.1| protein chain release factor a [uncultured alpha proteobacterium HF0070_05I22] Length = 334 Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats. Identities = 116/331 (35%), Positives = 177/331 (53%), Gaps = 13/331 (3%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA---ISFIKEIQDRLCDNLILL 73 D ++R + TK + A L RE L I ++ ++ L D + ++ Sbjct: 8 DKVLERRQEVETKLSRSAELSSKALA-DLSRELSELRPVCEQIELVRALESELKDAITMV 66 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYK--QFESLLSGEADSNDAYLEVHAGAGGTESQ 131 A +D+ + E L + ++ +E + Q L + DS +A LEV AG GG E+ Sbjct: 67 VEAAGDDEMQAMAEAEVTLLKERIPIEKERLQLLLLPKDKDDSRNAILEVRAGTGGDEAA 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + L MY R+A K ++ E +E+ + G K AT I G + + LK E GVHR+ Sbjct: 127 LFGANLFSMYQRFAAKNGWRFEVMEVSETGIGGYKEATATISGIDVFARLKFESGVHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ V P + ++I+I E+D RID +R+SG GGQ VNTTDSAVR Sbjct: 187 RVPETEAGGRIHTSAATVAVLP-EAEEVDIDIDENDLRIDVFRSSGPGGQSVNTTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV Q E+SQHKN+A+A +LRA+LY+ E + E + K ++G G Sbjct: 246 ITHMPTGIVVSQQDEKSQHKNRAKAMKILRARLYDAERARVESER--AAARKGQVGSGDR 303 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 +IR+Y P V D R N+ V+ Sbjct: 304 SERIRTYNF-PQGRVTDHRINLTLYKLDRVM 333 >gi|270285531|ref|ZP_06194925.1| peptide chain release factor 2 [Chlamydia muridarum Nigg] gi|301336928|ref|ZP_07225130.1| peptide chain release factor 2 [Chlamydia muridarum MopnTet14] Length = 220 Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats. Identities = 125/214 (58%), Positives = 155/214 (72%), Gaps = 1/214 (0%) Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY+RWA +K E ++ DGE AGIK TL + G AYG+ K E GVHRLVRISP+DSN Sbjct: 1 MYSRWANSHGWKVEVIDRLDGEVAGIKHITLKLIGEYAYGYAKAESGVHRLVRISPFDSN 60 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 ++RHTSF+S+ V+P +DD IE+EI D RIDTYR+SGAGGQHVN TDSAVRITH PTG+ Sbjct: 61 AKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGI 120 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 VV CQ ERSQ +N+ NMLRA++Y+ LQ+R E N K EI WG QIR+YV QP Sbjct: 121 VVSCQSERSQIQNREACMNMLRARIYQKLLQERLEKQNTNRKEKKEISWGSQIRNYVFQP 180 Query: 320 YQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 Y +VKD+RT E + ++DG+ LD F+KA LA Sbjct: 181 YTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYLA 214 >gi|195973772|gb|ACG63451.1| peptide chain release factor 2 [Francisella noatunensis subsp. orientalis] Length = 294 Score = 186 bits (471), Expect = 5e-45, Method: Composition-based stats. Identities = 149/296 (50%), Positives = 198/296 (66%), Gaps = 3/296 (1%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 + ED +W N A+ L R++ L+N + + I + L LLELA E++ Sbjct: 2 ELEDGSIWDNPEYAQNLGRQKVELENVVHNCEHISETLETLTELLELAEEDESLIQEIAK 61 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 ++ E +F + SG+ D N+ +L + +G+GGTE+QDWA ML+RMY RWA+ + Sbjct: 62 DTQDVTAEI--EKLEFRRMFSGQMDPNNVFLNIQSGSGGTEAQDWAEMLMRMYMRWADSQ 119 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK ++ DG+ AGIK TL I+G AYGW + E G+HRLVR SP+DSNS+RHTSF+S Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWFRTETGIHRLVRKSPFDSNSKRHTSFAS 179 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS Sbjct: 180 VFISPEVDDDIDIEINPADXRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 QHKN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL +K Sbjct: 240 QHKNRDSAMKQLKSKLYEMELQKRNAEKNDLEDSKADIGWGSQIRSYVLD-QSRIK 294 >gi|314955551|gb|EFS99954.1| peptide chain release factor 1 [Propionibacterium acnes HL027PA1] Length = 361 Score = 186 bits (471), Expect = 5e-45, Method: Composition-based stats. Identities = 110/343 (32%), Positives = 167/343 (48%), Gaps = 8/343 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +RL + T+ D + + L + L + +S + D +L Sbjct: 9 IDEVRRRLRDIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D + E ++ L S D DA +E+H+G GG ES +A Sbjct: 69 TE--EDPAFGLEAERLRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 126 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192 LLRMYTR+AE+ + L + G ++ + + AYG+LK E GVHR+ R Sbjct: 127 DLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGGVHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S+ R HTS + V P VD++ I ++ R+D YR+SG GGQ VNTTDSAVR+ Sbjct: 187 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPAEVRVDVYRSSGPGGQGVNTTDSAVRL 245 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311 TH+PTG+V CQ ERSQ +NKA+A MLRAK+ L Q+ + + + + + Sbjct: 246 THLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 305 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +R+Y P + D R + +L GDL D + A A + Sbjct: 306 VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 347 >gi|319760398|ref|YP_004124336.1| peptide chain release factor 2 [Candidatus Blochmannia vafer str. BVAF] gi|318039112|gb|ADV33662.1| peptide chain release factor 2 [Candidatus Blochmannia vafer str. BVAF] Length = 265 Score = 186 bits (471), Expect = 6e-45, Method: Composition-based stats. Identities = 142/256 (55%), Positives = 180/256 (70%), Gaps = 2/256 (0%) Query: 99 VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK-FKTEALEI 157 + + + E D+ + Y+++ +G+GG E+QDWANMLLRMY +W + +K F + Sbjct: 6 FDKLEMYRMFFQEHDNCNCYVDIQSGSGGIEAQDWANMLLRMYLKWLDSKKGFYVKKTTE 65 Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217 GE GIKSAT+ I GP AYGWLK E GVHRLVR SP+DS RRHTSF+SI+VYP +DD Sbjct: 66 TSGEFLGIKSATIKIIGPYAYGWLKTESGVHRLVRKSPFDSGGRRHTSFASIFVYPELDD 125 Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 +I I I D R+D YRASGAGGQHVN T+SAVR+THIPT VV QCQ +RSQHKNK QA Sbjct: 126 NITINIRPEDLRVDVYRASGAGGQHVNRTESAVRVTHIPTNVVTQCQSDRSQHKNKNQAI 185 Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 L+AKLY LELQK++ I E+ K +I WG QIRSY+L +KDLRT +EK + Sbjct: 186 KQLKAKLYNLELQKKQYEKKIRENKKLDITWGSQIRSYILDD-SRIKDLRTGLEKRNVKA 244 Query: 338 VLDGDLDDFMKATLAI 353 VL+GDLDDF+ ++ Sbjct: 245 VLNGDLDDFVTMSIKQ 260 >gi|1865700|emb|CAA67778.1| peptide release factor 2 [Bacillus firmus] Length = 282 Score = 186 bits (471), Expect = 6e-45, Method: Composition-based stats. Identities = 138/282 (48%), Positives = 191/282 (67%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++++L G D + +R++ L+ P W + A+ ++ E L ++ E+ Sbjct: 1 MAKRLTDFRGSLDLEAKQERMAELDEFMTAPDFWDDQEAAQTVINESNGLKEQVNVFLEL 60 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 +++ + + EL EE D + +E ++ + + + + LLS D N+A LE+H Sbjct: 61 EEKYENLEVSYELVKEEADEELEKELEAGVKELISRLNDFELQLLLSEPYDKNNAILELH 120 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+MLLRMYTRW+E+R FK E ++ G+EAG+KS TLLIKG NAYG+LK Sbjct: 121 PGAGGTESQDWASMLLRMYTRWSEQRGFKVETMDYLPGDEAGVKSVTLLIKGHNAYGYLK 180 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS+ RRHTSF S V P +DD++EI+I D ++DTYRASGAGGQH Sbjct: 181 AEKGVHRLVRISPFDSSGRRHTSFVSCEVMPELDDNVEIDIRTEDLKVDTYRASGAGGQH 240 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +NTTDSA+RITH+PT VV CQ ERSQ KN+ QA ML+AKL Sbjct: 241 INTTDSAIRITHLPTNTVVTCQSERSQIKNRDQAMKMLKAKL 282 >gi|32423703|gb|AAP81246.1| peptide chain release factor [Candidatus Portiera aleyrodidarum] Length = 297 Score = 186 bits (471), Expect = 6e-45, Method: Composition-based stats. Identities = 146/295 (49%), Positives = 203/295 (68%), Gaps = 2/295 (0%) Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 K +++ + +N LL LA+ E D L ++ + E+ L SG+ D N+AY+ Sbjct: 2 KTVENGIYNNAELLHLAITELDSKPLSFIKQDINFFEKELAKLDAVRLFSGDFDKNNAYV 61 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 E+ AG+GG ESQDWANMLLRMY+RWA FKTE + ++ G+ G+KSATL IKG A+G Sbjct: 62 EIKAGSGGVESQDWANMLLRMYSRWAVTHDFKTETVNLNIGDLLGVKSATLHIKGDYAFG 121 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI-EISESDCRIDTYRASGA 238 W++ E+G+HRLVR SP+DS+ RRHTSF+S++VYP + + +I+ ++ RIDTYR+SGA Sbjct: 122 WMRTEKGIHRLVRKSPFDSSKRRHTSFTSVFVYPEITMKVHNIKINTNELRIDTYRSSGA 181 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVNTTDSAVRITH+PT +VV+CQ ERSQH NK +A +L+ KLY+ + +K E Sbjct: 182 GGQHVNTTDSAVRITHLPTKIVVECQSERSQHSNKERALTLLKTKLYDFDKKKGEVERIN 241 Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 E K I WG QIRSYVL +KDLRT ++ + VL+G+LD F++A++ Sbjct: 242 IEKKKAGICWGNQIRSYVLDAQ-RIKDLRTGVKNNNCEKVLNGELDLFIEASIKQ 295 >gi|307128516|ref|YP_003880546.1| peptide chain release factor 1 [Candidatus Sulcia muelleri CARI] gi|306482978|gb|ADM89848.1| peptide chain release factor 1 [Candidatus Sulcia muelleri CARI] Length = 355 Score = 185 bits (470), Expect = 7e-45, Method: Composition-based stats. Identities = 106/345 (30%), Positives = 185/345 (53%), Gaps = 8/345 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R L + P + N + +E ++++ I++ + +L + + L Sbjct: 12 IESIKKRFYELYSLIIKPDIIHNNKNYIKIYKEYKNINKIINYYNNYKKKLKNLKEIENL 71 Query: 76 ALEEDDCSILQ--ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 + D L+ Q ++L++ K+ + + + +A +E+ AG GG E+ + Sbjct: 72 IKLDSDKEFLELANIDKKSQILELKLILKKIQIYFENQNNHKNALMELRAGTGGDEACIF 131 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 + RMYT + ++ + E L + G G K L I+G N YG LK E GVHR+ R+ Sbjct: 132 VEDIFRMYTMYFKELCWNYEILNMQHGPIKGYKEIILEIQGKNVYGTLKFESGVHRVQRV 191 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +S R HTS ++ ++P D +I + SD + DT+RASGAGGQHVN T+SA+R+T Sbjct: 192 PYTESQGRLHTSAITVAIFPEEDYKKKINLILSDIKRDTFRASGAGGQHVNKTESAIRLT 251 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ-- 311 HIPTG++ +CQ+ERSQHKN +A +LRA++Y+ EL +++E + + K I G + Sbjct: 252 HIPTGIIAECQEERSQHKNYEKAMKVLRARIYQSELNQKKE--KLSKERKDLISTGDRSA 309 Query: 312 -IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N + ++G +++ + A +++ Sbjct: 310 KIRTYNY-PQGRVTDHRINKSIYNLDHFMNGKINEMITALKILER 353 >gi|209554361|ref|YP_002284416.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|238054476|sp|B5ZAH6|RF1_UREU1 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|209541862|gb|ACI60091.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 10 str. ATCC 33699] Length = 359 Score = 185 bits (470), Expect = 7e-45, Method: Composition-based stats. Identities = 103/362 (28%), Positives = 173/362 (47%), Gaps = 19/362 (5%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 M+ +++L + + L + E + + + K + + + Sbjct: 1 MEYNKKLYEA-----IERVAVKNKTLKQELE--TITSDFKKIKEINIQLKKTTKIAEAFA 53 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSND 116 + + ++ ++ EL E D +++ +L K + + L + D + Sbjct: 54 KYKQKIDAGIVAEELLNTEKDLELVELAQMDLDDAKASIPVIENELKIMLLPTDPNDDKN 113 Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 +E+ AGG ES + L Y + E +K + +E+ G + +I G Sbjct: 114 VIVEMRPAAGGDESSIFVGNLFDTYRAYTESNNWKMKIIEMTPNAV-GFSFISFMISGEE 172 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 Y +K E GVHR+ R+ +S R HTS ++ V P D +++ I+ SD RIDTYRAS Sbjct: 173 VYSRMKFESGVHRVQRVPATESKGRVHTSTITVAVLP-EQDEVDVVINPSDLRIDTYRAS 231 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 GAGGQHVN T+SAVRITHIPTGVV CQ+ +SQ +N+ A MLRAKL+E +++ Sbjct: 232 GAGGQHVNRTESAVRITHIPTGVVAACQEGKSQIENRETAMKMLRAKLWEAAQEQQNAEF 291 Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 K ++G G +IR+Y P V D R ++ ++ G+LD+ + A + Sbjct: 292 ANL--RKNQVGTGDRSEKIRTYNY-PQNRVTDHRISLTLNKLDQIMMGELDEIIDALITD 348 Query: 354 KK 355 ++ Sbjct: 349 EQ 350 >gi|315604645|ref|ZP_07879708.1| peptide chain release factor RF1 [Actinomyces sp. oral taxon 180 str. F0310] gi|315313657|gb|EFU61711.1| peptide chain release factor RF1 [Actinomyces sp. oral taxon 180 str. F0310] Length = 364 Score = 185 bits (470), Expect = 8e-45, Method: Composition-based stats. Identities = 108/343 (31%), Positives = 156/343 (45%), Gaps = 11/343 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + + + DP + + + R L + + D EL Sbjct: 10 LEPLLAEYEQVEAQMADPRTLADPQLMRRVGRRYAELGRVKAAADRLSAAAGDLQAAREL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A+E+ + + + E K D+ D LE+ AG GG ES +A+ Sbjct: 70 AVEDRSFADEIPALEEEEAAAHEALVKIL--APRDPEDAMDVILEIKAGEGGEESALFAS 127 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVH 188 L RMY R+AE + L E G K TL I + LK E GVH Sbjct: 128 DLARMYGRYAEAHGWSVTELSATHTELGGFKDVTLAIRAKGTPAPDEGVWAHLKYEGGVH 187 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS ++V P ++D EI I +D RID YR+SG GGQ VNTTDS Sbjct: 188 RVQRVPITESQGRIHTSAVGVFVMPEIEDDDEIVIDPADLRIDVYRSSGPGGQSVNTTDS 247 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307 AVRITH+P+G+VV Q E+SQ +NK A +L ++L KRE A+ S+ + Sbjct: 248 AVRITHLPSGIVVSMQNEKSQLQNKEAALRVLASRLAAEARAKREAEASAQRLSQVRTVD 307 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P + D RT + + VL G LD + + Sbjct: 308 RSERIRTYNF-PENRIADHRTGFKAHNLDAVLSGALDAVISSL 349 >gi|297517277|ref|ZP_06935663.1| peptide chain release factor 1 [Escherichia coli OP50] Length = 274 Score = 185 bits (469), Expect = 9e-45, Method: Composition-based stats. Identities = 103/251 (41%), Positives = 152/251 (60%), Gaps = 6/251 (2%) Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + +GE G K Sbjct: 16 PKDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKE 75 Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 I G YG LK E G HR+ R+ +S R HTS ++ V P + D+ +I+ +D Sbjct: 76 IIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPAD 135 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ Sbjct: 136 LRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAA 195 Query: 288 ELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344 E+ KR++ + + +G G + R+Y P V D R N+ +V++G LD Sbjct: 196 EMAKRQQ--AEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 252 Query: 345 DFMKATLAIKK 355 ++ + + Sbjct: 253 MLIEPIIQEHQ 263 >gi|24638472|sp|P96314|RF2_BACFI RecName: Full=Peptide chain release factor 2; Short=RF-2 Length = 294 Score = 185 bits (469), Expect = 9e-45, Method: Composition-based stats. Identities = 138/282 (48%), Positives = 191/282 (67%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++++L G D + +R++ L+ P W + A+ ++ E L ++ E+ Sbjct: 13 MAKRLTDFRGSLDLEAKQERMAELDEFMTAPDFWDDQEAAQTVINESNGLKEQVNVFLEL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 +++ + + EL EE D + +E ++ + + + + LLS D N+A LE+H Sbjct: 73 EEKYENLEVSYELVKEEADEELEKELEAGVKELISRLNDFELQLLLSEPYDKNNAILELH 132 Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 GAGGTESQDWA+MLLRMYTRW+E+R FK E ++ G+EAG+KS TLLIKG NAYG+LK Sbjct: 133 PGAGGTESQDWASMLLRMYTRWSEQRGFKVETMDYLPGDEAGVKSVTLLIKGHNAYGYLK 192 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242 E+GVHRLVRISP+DS+ RRHTSF S V P +DD++EI+I D ++DTYRASGAGGQH Sbjct: 193 AEKGVHRLVRISPFDSSGRRHTSFVSCEVMPELDDNVEIDIRTEDLKVDTYRASGAGGQH 252 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +NTTDSA+RITH+PT VV CQ ERSQ KN+ QA ML+AKL Sbjct: 253 INTTDSAIRITHLPTNTVVTCQSERSQIKNRDQAMKMLKAKL 294 >gi|327454116|gb|EGF00771.1| peptide chain release factor 1 [Propionibacterium acnes HL083PA2] Length = 361 Score = 185 bits (469), Expect = 9e-45, Method: Composition-based stats. Identities = 110/343 (32%), Positives = 167/343 (48%), Gaps = 8/343 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +RL + T+ D + + L + L + +S + D +L Sbjct: 9 IDEVRRRLREIETQLADSAVLSDSSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D + E ++ L S D DA +E+H+G GG ES +A Sbjct: 69 TE--EDPAFGLEAERLRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 126 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192 LLRMYTR+AE+ + L + G ++ + + AYG+LK E GVHR+ R Sbjct: 127 DLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGGVHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S+ R HTS + V P VD++ I ++ R+D YR+SG GGQ VNTTDSAVR+ Sbjct: 187 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPAEVRVDVYRSSGPGGQGVNTTDSAVRL 245 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311 TH+PTG+V CQ ERSQ +NKA+A MLRAK+ L Q+ + + + + + Sbjct: 246 THLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 305 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +R+Y P + D R + +L GDL D + A A + Sbjct: 306 VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 347 >gi|213859593|ref|ZP_03385297.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 317 Score = 185 bits (469), Expect = 9e-45, Method: Composition-based stats. Identities = 108/302 (35%), Positives = 166/302 (54%), Gaps = 7/302 (2%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLS 109 L + + Q D + + + + QE ++ + + Q L Sbjct: 1 QLSDVSRCFTDWQQVQDDIETAQMMLDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPK 60 Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169 D +A+LEV AG GG E+ +A L RMY+R+AE R+++ E + + +GE G K Sbjct: 61 DPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEII 120 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 I G YG LK E G HR+ R+ +S R HTS ++ V P + ++ +I+ +D R Sbjct: 121 AKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLR 180 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 IDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E Sbjct: 181 IDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAET 240 Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 KR++ + + +G G + R+Y P V D R N+ + ++G LD Sbjct: 241 AKRQQ--AEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDML 297 Query: 347 MK 348 ++ Sbjct: 298 IE 299 >gi|116326889|ref|YP_796609.1| peptide chain release factor 1 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116329879|ref|YP_799597.1| peptide chain release factor 1 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122282347|sp|Q04W81|RF1_LEPBJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|122285261|sp|Q056R9|RF1_LEPBL RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|116119633|gb|ABJ77676.1| Peptide chain release factor 1 [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116123568|gb|ABJ74839.1| Peptide chain release factor 1 [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 354 Score = 185 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 112/347 (32%), Positives = 181/347 (52%), Gaps = 14/347 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA---ISFIKEIQDRLCDNLIL 72 + ++ ++ + ++ K L +ER L + +I D L Sbjct: 5 LEKIQEKYLRISEELNS---AKDPSSLKSLYKERSRLTPLYLKVEEYLKIYKDKKDAEEL 61 Query: 73 LELALEEDDCSILQETS-DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 + +E+ S+L+E ++++ + + L + +E+ AG GG E+ Sbjct: 62 IPSEKDEEMHSMLKEEIRRASKKLEELEKELEILLLTPDPNSGKNILVEIRAGTGGEEAG 121 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + L RMY+++A+K+K K+E ++ G+K ++ AY K E G HR+ Sbjct: 122 LFVADLFRMYSKFADKQKIKSEIIDSAPTGIGGLKEIIFALEDERAYDLFKFEGGTHRVQ 181 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI +S R HTS ++ V P D EIEI+E+D RID YR+SGAGGQHVNTTDSAVR Sbjct: 182 RIPSTESGGRIHTSAVTVAVLP-EADEEEIEINENDLRIDVYRSSGAGGQHVNTTDSAVR 240 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIPTGVVV CQ E+SQHKNKA+A +L A++ E + + +++ ++ + K IG G Sbjct: 241 ITHIPTGVVVACQDEKSQHKNKAKALRILSARILEKQTEDKKQASDAIK--KQMIGSGDR 298 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 ++R+Y P D R + S +++GDL++ + A + Sbjct: 299 SERVRTYNF-PQGRCTDHRIGFTSHNLSAIMEGDLEELIGALTEEDR 344 >gi|220918000|ref|YP_002493304.1| peptide chain release factor 2 [Anaeromyxobacter dehalogenans 2CP-1] gi|219955854|gb|ACL66238.1| peptide chain release factor 2 [Anaeromyxobacter dehalogenans 2CP-1] Length = 309 Score = 185 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 153/292 (52%), Positives = 206/292 (70%) Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 ++ L D L ELA E D + E ++ + + ++E + + +LSG D+ A +E Sbjct: 7 AVRRALDDAQALCELAEEARDEATRAEAAEAAEAVGRQLEGLELQKMLSGPHDAAGAIVE 66 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 V +GAGG E+ DWA ML RMY R+ E+R ++ E ++ GEEAGI SA+ +++G + YGW Sbjct: 67 VKSGAGGVEAMDWAAMLYRMYVRYCERRGWEVEPADLVAGEEAGISSASFIVRGDHPYGW 126 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E+GVHRLVRISP+D N+RR TSF+++ V P ++D I I+I E+D RIDTYR+SGAGG Sbjct: 127 LKAEKGVHRLVRISPFDQNARRQTSFAAVDVTPEIEDDIVIDIKEADVRIDTYRSSGAGG 186 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VN TDSAVR+TH+PTG+VV Q ERSQ KN++ AW +LRAKLY+LE +KR + E Sbjct: 187 QKVNKTDSAVRMTHLPTGIVVAVQNERSQQKNRSVAWKILRAKLYDLEEKKRAAARDAAE 246 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + K +I +G QIRSYVLQPYQMVKDLRT +E DVLDGDLD F++ L Sbjct: 247 ALKKDIDFGSQIRSYVLQPYQMVKDLRTGVETGKVDDVLDGDLDPFIQPYLM 298 >gi|87300884|ref|ZP_01083726.1| peptide chain release factor 1 [Synechococcus sp. WH 5701] gi|87284755|gb|EAQ76707.1| peptide chain release factor 1 [Synechococcus sp. WH 5701] Length = 367 Score = 185 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 105/348 (30%), Positives = 168/348 (48%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA---ISFIKEIQDRLCDNLIL 72 + A + L + DP + + E + L +ER L+ + + +Q +L + L Sbjct: 10 LEAADRTFQALERQLADPAVAADPSELRRLSKERARLEPLATGLGHWQSLQRQLKEAQQL 69 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQF--ESLLSGEADSNDAYLEVHAGAGGTES 130 + + + L + +L+ +Q L S D LE+ AG GG E+ Sbjct: 70 ARQSKGDPEMEALIQEELRELGAQLDGLEQQLTLALLPSDPRDERSVMLEIRAGTGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY R+A+ + + L + + G K L I+G Y LK E GVHR+ Sbjct: 130 ALWAGDLARMYERFAQTVGWSVQPLSASESDLGGFKELILAIRGDGVYSQLKYEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P D +E+++ +D I T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADPVEVQLDPADLDISTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 + H PTG+ V C QERSQ +N+ +A +LRAKL E EL + + ++G G Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERALEILRAKLLERELAEAAAAESSARR--AQVGSGE 306 Query: 311 Q---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + IR+Y + V D R + VL G L + + A +A ++ Sbjct: 307 RSEKIRTYNAKD-NRVTDHRLGR-NFALEPVLQGQLAEVIGACVAAEQ 352 >gi|37523990|ref|NP_927367.1| peptide chain release factor 1 [Gloeobacter violaceus PCC 7421] gi|46576716|sp|Q7ND15|RF1_GLOVI RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|35214996|dbj|BAC92362.1| translation releasing factor RF-1 [Gloeobacter violaceus PCC 7421] Length = 364 Score = 185 bits (468), Expect = 1e-44, Method: Composition-based stats. Identities = 95/347 (27%), Positives = 180/347 (51%), Gaps = 12/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ + + L T+ DP L N E ++R R L+ + Q + + ++ Sbjct: 11 LNDIERTYNDLTTRLGDPSLASNPQEMLRIVRMRAGLERTVEAYDHWQRLCAERNAVRQM 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 +E D + + + ++ + + L D + LE+ AG GG E+ Sbjct: 71 IRDEQDPELRELAEEEHTGLEERIARLEDEITLLLLPRDPNDDKNVMLEIRAGTGGDEAA 130 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L+RMY R+AE + + + E G K L I+G + Y LK E GVHR+ Sbjct: 131 IFAGDLMRMYIRYAEGQGWSVKLASESPAEMGGFKEVILEIRGESVYSKLKFEAGVHRVQ 190 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ ++ R HTS +++ + P + +++EI+ +D I T R+ GAGGQ+VN ++AV Sbjct: 191 RVPVTETQGRVHTSTATVAIMP-EVEEVDVEINPNDIEITTTRSGGAGGQNVNKVETAVH 249 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 + H P+G+ + CQ+ERSQ +NKA+A +LR KLY++ ++RE+ + ++++G G Sbjct: 250 LVHKPSGIHIHCQEERSQLQNKARAMQILRVKLYDI--KQREQHEQVSGLRRSQVGTGDR 307 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D R + + + + ++G+++ +++ +A + Sbjct: 308 SEKIRTYNYKD-NRVTDHRLS-QNFTLNTAIEGEIETLIQSAIAAAQ 352 >gi|242089427|ref|XP_002440546.1| hypothetical protein SORBIDRAFT_09g002890 [Sorghum bicolor] gi|241945831|gb|EES18976.1| hypothetical protein SORBIDRAFT_09g002890 [Sorghum bicolor] Length = 416 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 126/345 (36%), Positives = 185/345 (53%), Gaps = 15/345 (4%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL--- 75 QR ++L + P + E +E + L++ + IKE++ + + L L Sbjct: 68 IEQRSAYLQEQINQPA--ASPEEYSRANKEFRKLESTMELIKELRSKREEIEGLKSLVTN 125 Query: 76 --ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 ++ +E + ++ K L EAD D LEV AG GG E+ + Sbjct: 126 AREEKDMREMAAEELLEAVEVEKRLQHELFRSLLPKDEADERDCILEVRAGTGGEEASLF 185 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A + RMY ++A+K +K + ++I + G K A+ I GP A+G LK E G+HR+ R+ Sbjct: 186 AMDIFRMYEKYAQKNGWKFDVIDIMESAVKGYKEASGTISGPGAFGKLKFESGIHRVQRV 245 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 + + R HTS S+ V P D +++++ D RIDTYR+ G+GGQ VNTTDSAVRIT Sbjct: 246 PVTEKSGRVHTSAVSVAVLPQ-ADEVDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRIT 304 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 HIPTG VV Q ERSQH NKA+A +LRA+LYELE + + S +IG G Sbjct: 305 HIPTGTVVAIQDERSQHMNKAKALKVLRARLYELERHRLHMDRSKLRSE--QIGSGDRSE 362 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354 +IR+Y P V D R I S +DV++G+ LD F+ A L + Sbjct: 363 RIRTYNF-PQGRVTDHRVGITHHSIADVMEGESLDVFVDALLLQE 406 >gi|320169793|gb|EFW46692.1| peptide chain release factor 1 [Capsaspora owczarzaki ATCC 30864] Length = 523 Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats. Identities = 107/368 (29%), Positives = 189/368 (51%), Gaps = 25/368 (6%) Query: 2 KLSRQLN-CLGGLFDWDNAVQRLSFLNTKTED--PHLWQNVIEAKMLMR-ERQHLDNAIS 57 ++ +L + N + L + P + + +++ + L+ + Sbjct: 143 EIKSKLTPAIRSY--LSNVTRDYQALTQQMTSISPSATKEIN----VLKGQIAALNPLVD 196 Query: 58 FIKEI---QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSG 110 ++ + + + D ++E + E+D + + ++ + E + Sbjct: 197 ALQRMTAKRKDIDDLDAMVEASRNENDVEMRKMAQSEWTDAVEQLYELEQELLNVLVPKN 256 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D +A LEV AG GG E+ +++ + MY +AE R +K E ++I + G K A+ Sbjct: 257 EVDDRNAILEVRAGTGGLEASLFSSDMFTMYQNYAEIRGWKFEVIDISRSDVGGFKEASA 316 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G +G LK E GVHR+ R+ +S R HTS ++ + P ++IE++E D RI Sbjct: 317 TISGYGVFGHLKFESGVHRVQRVPQTESQGRVHTSTVTVALLP-EAQDVDIELNERDLRI 375 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 +T RASGAGGQHVN T+SA+R+THIP+G+ V Q++RSQHKN+A+A+++LRA+LYE++ + Sbjct: 376 ETMRASGAGGQHVNKTESAIRVTHIPSGIAVHVQEDRSQHKNRAKAYSVLRARLYEIQRE 435 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDF 346 K + + ++G G +IR+Y P V D R N+ + L G+ LD+ Sbjct: 436 KLAQERAAHRAE--QVGTGSRSERIRTYNF-PQDRVTDHRVNVTLHGVPEFLLGEGLDEI 492 Query: 347 MKATLAIK 354 + + + Sbjct: 493 IASLRTHE 500 >gi|195973776|gb|ACG63453.1| peptide chain release factor 2 [Francisella noatunensis] Length = 294 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 151/296 (51%), Positives = 205/296 (69%), Gaps = 3/296 (1%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 + ED +W N A+ R++ L+N + + I + L + L L E+D S++QE Sbjct: 2 ELEDGSIWDNPEYAQNFGRQKVELENIVHNCEHISETLE--TLTELLELAEEDESLMQEI 59 Query: 89 SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + + Q + E+E +F + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+ Sbjct: 60 AKDTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 FK ++ DG+ AGIK L I+G AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S Sbjct: 120 GFKVTVDDVSDGDVAGIKGCALKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 +++ P VDD I+IEI+ +D R+DTYRASGAGGQH+N TDSAVRITHIPT +VVQ Q +RS Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHINKTDSAVRITHIPTNIVVQSQSDRS 239 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 QHKN+ A L++KLYE+ELQKR N E SK +IGWG QIRSYVL +K Sbjct: 240 QHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIK 294 >gi|289428601|ref|ZP_06430285.1| peptide chain release factor 1 [Propionibacterium acnes J165] gi|289158295|gb|EFD06514.1| peptide chain release factor 1 [Propionibacterium acnes J165] gi|313807753|gb|EFS46240.1| peptide chain release factor 1 [Propionibacterium acnes HL087PA2] gi|313825434|gb|EFS63148.1| peptide chain release factor 1 [Propionibacterium acnes HL063PA1] gi|314978719|gb|EFT22813.1| peptide chain release factor 1 [Propionibacterium acnes HL072PA2] gi|315088524|gb|EFT60500.1| peptide chain release factor 1 [Propionibacterium acnes HL072PA1] gi|327331707|gb|EGE73444.1| peptide chain release factor 1 [Propionibacterium acnes HL096PA3] gi|327443483|gb|EGE90137.1| peptide chain release factor 1 [Propionibacterium acnes HL013PA2] gi|332675656|gb|AEE72472.1| peptide chain release factor 1 [Propionibacterium acnes 266] Length = 361 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 109/343 (31%), Positives = 166/343 (48%), Gaps = 8/343 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +RL + T+ D + + L + L + +S + D +L Sbjct: 9 IDEVRRRLREIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D + E ++ L S D DA +E+H+G GG ES +A Sbjct: 69 TE--EDPAFGLEAERLRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 126 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192 LLRMYTR+AE+ + L + G ++ + + AYG+LK E GVHR+ R Sbjct: 127 DLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGGVHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S+ R HTS + V P VD++ I ++ R+D YR+SG GGQ VNTTDSAVR+ Sbjct: 187 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPAEVRVDVYRSSGPGGQGVNTTDSAVRL 245 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311 TH+ TG+V CQ ERSQ +NKA+A MLRAK+ L Q+ + + + + + Sbjct: 246 THLRTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 305 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +R+Y P + D R + +L GDL D + A A + Sbjct: 306 VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 347 >gi|315077778|gb|EFT49829.1| peptide chain release factor 1 [Propionibacterium acnes HL053PA2] Length = 361 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 109/343 (31%), Positives = 166/343 (48%), Gaps = 8/343 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D +RL + T+ D + + L + L + +S + D +L Sbjct: 9 IDEVRRRLREIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D + E ++ L S D DA +E+H+G GG ES +A Sbjct: 69 TE--EDPAFGLEAERLRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 126 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192 LLRMYTR+AE+ + L + G ++ + + AYG+LK E GVHR+ R Sbjct: 127 DLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGGVHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S+ R HTS + V P VD++ I ++ R+D YR+SG GGQ VNTTDSAVR+ Sbjct: 187 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPAEVRVDVYRSSGPGGQGVNTTDSAVRL 245 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311 TH+PTG+V CQ ERSQ +NKA+A MLRAK+ L Q+ + + + + + Sbjct: 246 THLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 305 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +R+Y + D R + +L GDL D + A A + Sbjct: 306 VRTYNFS-ENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 347 >gi|254780874|ref|YP_003065287.1| peptide chain release factor 1 [Candidatus Liberibacter asiaticus str. psy62] gi|254040551|gb|ACT57347.1| peptide chain release factor 1 [Candidatus Liberibacter asiaticus str. psy62] Length = 357 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 106/347 (30%), Positives = 167/347 (48%), Gaps = 18/347 (5%) Query: 18 NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQ---HLDNAISFIKEIQDRLCDNLILL 73 + R + + + + P + L E + + IS + + D ++ Sbjct: 11 DLKNRFAEIELRMSESPSV----DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQF--ESLLSGEADSNDAYLEVHAGAGGTESQ 131 + + L + ++ + L D LE+ AG GG+E+ Sbjct: 67 GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + L RMY R+A RK+K E L D ++ G K I G + +K E GVHR+ Sbjct: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +++ R HTS +++ V P I+++I D RIDT RASG+GGQHVNTTDSAVR Sbjct: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIPTG++V E+SQH+N+ +A +LRA+LY++E ++ + K +IG G Sbjct: 246 ITHIPTGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANER--SANRKLQIGSGDR 302 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + D R N+ VL G +DD + L + Sbjct: 303 SERIRTYNFS-QGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348 >gi|311086167|gb|ADP66249.1| peptide chain release factor 2 [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] Length = 248 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 133/247 (53%), Positives = 184/247 (74%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S + D D Y+++ +G+GGT++QDW+ MLLRMY RWA+K+ F TE ++ GE GIK Sbjct: 1 MFSKKNDHYDCYIDIQSGSGGTDAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 S+T+ + G A+GW + E G+HRL+R SP+DS RRHTSFSSI++YP +++ I+I I+ S Sbjct: 61 SSTIKVSGEYAFGWFRTETGIHRLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYS 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVN T+SAVRITH+PT +V QCQ RSQHKNK QA +++KLYE Sbjct: 121 DLRIDVYRASGAGGQHVNRTESAVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ++++K++E E +K++I WG QIRSY+L +KDLRT +EK VLDGDLDDF Sbjct: 181 IQMRKKQEEKQKIEQNKSDITWGNQIRSYILD-NSKIKDLRTGVEKNHVQSVLDGDLDDF 239 Query: 347 MKATLAI 353 ++ +L + Sbjct: 240 IEQSLIM 246 >gi|119952993|ref|YP_945202.1| peptide chain release factor 1 [Borrelia turicatae 91E135] gi|254790864|sp|A1QYZ0|RF1_BORT9 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|119861764|gb|AAX17532.1| bacterial peptide chain release factor 1 [Borrelia turicatae 91E135] Length = 357 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 120/331 (36%), Positives = 187/331 (56%), Gaps = 11/331 (3%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 ++ L K +D +L +N E +++E +L+ E ++ + ++ E Sbjct: 9 IESKIKILEEKLQDTNLIKNQKEYAKVIKEYNYLEKIKEKKDEYENIISQIDENQKILSE 68 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 E++ + + L + L+ + + L E D+ + +E+ AG GG E+ +A Sbjct: 69 EENLEMKELIKQELTHLNLKKDEIEHTIKILLLHQDENDNKNIIIEIRAGTGGEEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 + L MYT+++EK+K+KTE + ++ E G K + IKG + LK E GVHR+ R+ Sbjct: 129 HNLYEMYTKYSEKKKWKTELINFNETELGGFKEVSFEIKGKEVFKKLKHESGVHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +SN R TS +++ V P V+++ I+E D RID YR+SGAGGQHVNTTDSAVRITH Sbjct: 189 ITESNGRLQTSAATVAVLPEVEETDIE-INEKDLRIDVYRSSGAGGQHVNTTDSAVRITH 247 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VVQCQ ERSQHKNK QA +LRA+LY+ E K++E K ++G G + Sbjct: 248 LPTGIVVQCQNERSQHKNKDQAMKILRARLYKFEDLKKQE--QRSNDRKQQVGSGDRSER 305 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 IR+Y P V + R NI +++ G+ Sbjct: 306 IRTYNF-PQNRVTEHRANISLYKLEEIMQGE 335 >gi|91762346|ref|ZP_01264311.1| protein release factor Class I (RF-1) [Candidatus Pelagibacter ubique HTCC1002] gi|91718148|gb|EAS84798.1| protein release factor Class I (RF-1) [Candidatus Pelagibacter ubique HTCC1002] Length = 357 Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats. Identities = 110/344 (31%), Positives = 179/344 (52%), Gaps = 15/344 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLIL 72 ++ + + S L + + + +E L+ I + D + Sbjct: 7 IEDLISKHSVLEKELSSGEV--DKKLFAEKSKEYSDLNEVIDDARKYFSYEGEKKDLEKI 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS--GEADSNDAYLEVHAGAGGTES 130 L + +++ + E +++ E K+ + L EAD +A +E+ AG GG E+ Sbjct: 65 LSDSNSDNEFKEMAEVELKDLKLENETIEKKLKLFLLPKDEADKKNAIIEIRAGTGGLEA 124 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L +MY + + ++K++ E + + E G+K I+G N Y LK E GVHR+ Sbjct: 125 SLFAADLFKMYEKVSHQKKWELELISMSQSEAGGLKEVIASIRGKNIYSTLKYESGVHRV 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + ++I+I++SD RID +RA G GGQ VNTTDSAV Sbjct: 185 QRVPDTETQGRVHTSAATVAVLP-EAEEVDIKINDSDLRIDVFRAGGPGGQSVNTTDSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG+ V Q ++SQHKNKA+ +LR++LYELE + E E K++IG G Sbjct: 244 RITHIPTGLSVSQQDQKSQHKNKAKGMLILRSRLYELERSRIEGER--SEDRKSKIGTGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350 +IR+Y P V D R N+ L+G+ D+ ++ Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLHKLEAFLEGEAFDEMVENL 344 >gi|86159138|ref|YP_465923.1| peptide chain release factor 2 [Anaeromyxobacter dehalogenans 2CP-C] gi|85775649|gb|ABC82486.1| bacterial peptide chain release factor 2 (bRF-2) [Anaeromyxobacter dehalogenans 2CP-C] Length = 309 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 154/292 (52%), Positives = 205/292 (70%) Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 ++ L D L ELA E D + E ++ + + ++E + + +LSG D+ A +E Sbjct: 7 AVRRSLDDAQALNELAEEARDEATRAEAAEAAEAVGRQLEGLELQKMLSGPHDAAGAIVE 66 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 V +GAGG E+ DWA ML RMY R+ E+R ++ E ++ GEEAGI SA+ +++G + YGW Sbjct: 67 VKSGAGGVEAMDWAAMLYRMYVRYCERRGWEVEPADLVAGEEAGISSASFIVRGDHPYGW 126 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LK E+GVHRLVRISP+D N+RR TSF+++ V P +DD I I+I E+D RIDTYR+SGAGG Sbjct: 127 LKAERGVHRLVRISPFDQNARRQTSFAAVDVTPEIDDDIVIDIKEADVRIDTYRSSGAGG 186 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VN TDSAVR+TH+PTG+VV Q ERSQ KN+ AW +LRAKLY+LE +KR + E Sbjct: 187 QKVNKTDSAVRMTHLPTGIVVAVQNERSQQKNRNVAWKILRAKLYDLEEKKRAAARDAAE 246 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 + K +I +G QIRSYVLQPYQMVKDLRT +E DVLDGDLD F++ L Sbjct: 247 ALKKDIDFGSQIRSYVLQPYQMVKDLRTGVETGKVDDVLDGDLDPFIQPYLM 298 >gi|68171785|ref|ZP_00545129.1| Peptide chain release factor 1 [Ehrlichia chaffeensis str. Sapulpa] gi|67998796|gb|EAM85504.1| Peptide chain release factor 1 [Ehrlichia chaffeensis str. Sapulpa] Length = 311 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 173/305 (56%), Gaps = 10/305 (3%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEAD 113 I +Q + L+ + + L + ++ +L + + + D Sbjct: 1 IDQYNILQKDIAGLEELINNPETDHELKSLAKEEFYERQKQLPKVKHKLKLSLLPKDKDD 60 Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 + +A LE+ AG GG E+ + L RMYT++AE++ +K E + G K +L I Sbjct: 61 ARNAILEIRAGTGGEEAALFVTDLYRMYTKYAEQKNWKFEQINSSSTGIGGHKEISLCIS 120 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G N + LK E GVHR+ R+ +++ R HTS +++ V P + ++++I E D RID Y Sbjct: 121 GSNVFARLKFESGVHRVQRVPETEASGRLHTSAATVAVLP-EIEEVDLKIDEKDLRIDVY 179 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 R+SG GGQ VNTTDSAVRITHIP+G+VV Q E+SQHKNK++A +LRA+LY LE QKR+ Sbjct: 180 RSSGPGGQSVNTTDSAVRITHIPSGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKRD 239 Query: 294 EIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKA 349 I + K++IG G +IR+Y P + D R N+ D++ +G+LD+F++A Sbjct: 240 AE--ISQMRKSQIGSGDRSERIRTYNF-PQSRITDHRINLTLYRLDDIMKEGNLDEFIEA 296 Query: 350 TLAIK 354 +A Sbjct: 297 LIAED 301 >gi|71083224|ref|YP_265943.1| protein release factor class I [Candidatus Pelagibacter ubique HTCC1062] gi|119361574|sp|Q4FN99|RF1_PELUB RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|71062337|gb|AAZ21340.1| protein release factor Class I (RF-1) [Candidatus Pelagibacter ubique HTCC1062] Length = 357 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 110/344 (31%), Positives = 179/344 (52%), Gaps = 15/344 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLIL 72 ++ + + S L + + + +E L+ I + D + Sbjct: 7 IEDLISKHSILEKELSSGEV--DKKLFAEKSKEYSDLNEVIDDARKYFSYEGEKKDLEKI 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS--GEADSNDAYLEVHAGAGGTES 130 L + +++ + E +++ E K+ + L EAD +A +E+ AG GG E+ Sbjct: 65 LSDSNSDNEFKEMAEVELKDLKLENETIEKKLKLFLLPKDEADKKNAIIEIRAGTGGLEA 124 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L +MY + + ++K++ E + + E G+K I+G N Y LK E GVHR+ Sbjct: 125 SLFAADLFKMYEKVSHQKKWELELISMSQSEAGGLKEVIASIRGKNIYSTLKYESGVHRV 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + ++I+I++SD RID +RA G GGQ VNTTDSAV Sbjct: 185 QRVPDTETQGRVHTSAATVAVLP-EAEEVDIKINDSDLRIDVFRAGGPGGQSVNTTDSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG+ V Q ++SQHKNKA+ +LR++LYELE + E E K++IG G Sbjct: 244 RITHIPTGLSVSQQDQKSQHKNKAKGMLILRSRLYELERSRIEGER--SEDRKSKIGTGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350 +IR+Y P V D R N+ L+G+ D+ ++ Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLHKLEAFLEGEAFDEMVENL 344 >gi|254690018|ref|ZP_05153272.1| peptide chain release factor 1 [Brucella abortus bv. 6 str. 870] Length = 337 Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats. Identities = 110/324 (33%), Positives = 173/324 (53%), Gaps = 18/324 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R S + ++ + P + L E L + + I+E+ D + L + Sbjct: 23 DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 78 Query: 76 ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + ++ + + + Q L AD +A LE+ AG GG E+ Sbjct: 79 RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 138 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A ++ ++ E + +G+ G K + G + LK E GVHR+ Sbjct: 139 TLFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 198 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + I+IEI D RIDT RASGAGGQHVNTTDSAV Sbjct: 199 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 257 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG++V Q E+SQH+N+A+A +LRA+LY++E QK + ++ ++++G G Sbjct: 258 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 314 Query: 310 --RQIRSYVLQPYQMVKDLRTNIE 331 +IR+Y P V D R N+ Sbjct: 315 RSERIRTYNF-PQGRVTDHRINLT 337 >gi|311086739|gb|ADP66820.1| peptide chain release factor 2 [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] Length = 248 Score = 183 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 133/247 (53%), Positives = 184/247 (74%), Gaps = 1/247 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S + D D Y+++ +G+GGT++QDW+ MLLRMY RWA+K+ F TE ++ GE GIK Sbjct: 1 MFSKKNDHYDCYIDIQSGSGGTDAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 S+T+ + G A+GW + E G+HRL+R SP+DS RRHTSFSSI++YP +++ I+I I+ S Sbjct: 61 SSTIKVSGEYAFGWFRTETGIHRLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYS 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RID YRASGAGGQHVN T+SAVRITH+PT +V QCQ RSQHKNK QA +++KLYE Sbjct: 121 DLRIDVYRASGAGGQHVNRTESAVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYE 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 ++++K++E E +K++I WG QIRSY+L +KDLRT +EK VLDGDLDDF Sbjct: 181 IQIRKKQEEKQKIEQNKSDITWGNQIRSYILD-NSKIKDLRTGVEKNHVQSVLDGDLDDF 239 Query: 347 MKATLAI 353 ++ +L + Sbjct: 240 IEQSLIM 246 >gi|195650889|gb|ACG44912.1| peptide chain release factor 1 [Zea mays] Length = 356 Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats. Identities = 124/345 (35%), Positives = 187/345 (54%), Gaps = 15/345 (4%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 QR ++L + P + E +E + L++ + IK+++ + + L L Sbjct: 8 IEQRSAYLQEQINQPA--ASPEEYSRANKEFRKLESTMELIKDLRSKQEEIEGLKSLVAN 65 Query: 79 EDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 + + ++E ++ + K L EAD D LEV AG GG E+ + Sbjct: 66 DHEEKDMREMAEEELLVAVEEEKRLQHELFRSLLPKDEADEKDCILEVRAGTGGEEASLF 125 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A + RMY ++A+K +K + ++I + G K A+ I GP A+G LK E G+HR+ R+ Sbjct: 126 AMDIFRMYEKYAQKNGWKFDVIDIMESAVKGYKEASGTISGPGAFGKLKFESGIHRVQRV 185 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 + + R HTS S+ V P D +++++ D RIDTYR+ G+GGQ VNTTDSAVRIT Sbjct: 186 PATEKSGRMHTSAVSVAVLPQ-ADEVDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRIT 244 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 HIPTG VV Q ERSQH NKA+A +LRA+LYELE ++ + S +IG G Sbjct: 245 HIPTGTVVAIQDERSQHMNKAKALKVLRARLYELERRRLHMDRSKLRSE--QIGSGDRSE 302 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354 +IR+Y P V D R + S +DV++G+ LD F+ A L + Sbjct: 303 RIRTYNF-PQGRVTDHRVGVTHHSIADVMEGESLDMFVDALLLQE 346 >gi|260755553|ref|ZP_05867901.1| peptide chain release factor 1 [Brucella abortus bv. 6 str. 870] gi|260675661|gb|EEX62482.1| peptide chain release factor 1 [Brucella abortus bv. 6 str. 870] Length = 342 Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats. Identities = 110/324 (33%), Positives = 173/324 (53%), Gaps = 18/324 (5%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R S + ++ + P + L E L + + I+E+ D + L + Sbjct: 28 DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 83 Query: 76 ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + + ++ + + + Q L AD +A LE+ AG GG E+ Sbjct: 84 RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 143 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L RMY R+A ++ ++ E + +G+ G K + G + LK E GVHR+ Sbjct: 144 TLFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 203 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + I+IEI D RIDT RASGAGGQHVNTTDSAV Sbjct: 204 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 262 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG++V Q E+SQH+N+A+A +LRA+LY++E QK + ++ ++++G G Sbjct: 263 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 319 Query: 310 --RQIRSYVLQPYQMVKDLRTNIE 331 +IR+Y P V D R N+ Sbjct: 320 RSERIRTYNF-PQGRVTDHRINLT 342 >gi|212697120|ref|ZP_03305248.1| hypothetical protein ANHYDRO_01686 [Anaerococcus hydrogenalis DSM 7454] gi|212675895|gb|EEB35502.1| hypothetical protein ANHYDRO_01686 [Anaerococcus hydrogenalis DSM 7454] Length = 263 Score = 182 bits (462), Expect = 7e-44, Method: Composition-based stats. Identities = 104/257 (40%), Positives = 158/257 (61%), Gaps = 7/257 (2%) Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 + + D D +E+ AGAGG E+ +A L RMY +A+K+ +KTE +++ Sbjct: 1 MKILLIPQDPNDHKDVIVEIRAGAGGEEAGLFAGNLYRMYHMYADKQNYKTEDIDVSSQG 60 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 G+K AT +++G AY LK E GVHR+ R+ +S R HTS +++ V P D ++I Sbjct: 61 IGGMKEATFIVRGEGAYSKLKYESGVHRVQRVPETESGGRIHTSTATVAVLP-EADEVDI 119 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 +I +D R D YR+SG GGQ VNTTDSAVR+THIPTG+VV CQ E+SQ KNK +A +LR Sbjct: 120 KIDPNDIRTDVYRSSGNGGQSVNTTDSAVRLTHIPTGLVVTCQDEKSQIKNKDKAMRVLR 179 Query: 282 AKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 A+LYE+E +KR++ I ++ K+++G G +IR+Y P + D R N D Sbjct: 180 ARLYEMEEEKRQKE--ISDNRKSQVGTGDRSERIRTYNY-PQGRITDHRINKTIYQLDDF 236 Query: 339 LDGDLDDFMKATLAIKK 355 LDG++++ + + + + Sbjct: 237 LDGNIEEMIDSLITEDQ 253 >gi|115462961|ref|NP_001055080.1| Os05g0277300 [Oryza sativa Japonica Group] gi|113578631|dbj|BAF16994.1| Os05g0277300 [Oryza sativa Japonica Group] Length = 349 Score = 182 bits (461), Expect = 8e-44, Method: Composition-based stats. Identities = 122/342 (35%), Positives = 185/342 (54%), Gaps = 15/342 (4%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA-L 77 QR ++L + P + E +E L++ + I+E++ + + L L Sbjct: 1 IEQRSAYLQEQINQPD--ASPEEYSRANKELHKLESTMDMIEELRSKQEEIEGLKSLMTN 58 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQDW 133 ++ + + L + E + Q + EAD D LEV AG GG E+ + Sbjct: 59 SVEEKDFREMAAQELLQALEEEKQLQHKLFRSLLPKDEADERDCILEVRAGTGGEEASLF 118 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A + +MY ++++K +K +A++I + G K A+ I GP AYG LK E G+HR+ R+ Sbjct: 119 AMDIFKMYEKYSQKNGWKFDAIDIMESALKGYKEASGTISGPGAYGKLKFESGIHRVQRV 178 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 + + R HTS S+ + P D +++++ D RIDTYR+ G+GGQ VNTTDSAVRIT Sbjct: 179 PVTEKSGRVHTSAVSVAILPQ-ADEVDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRIT 237 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H+PTG VV Q ERSQH+NKA+A +LRA+LYE+E + + S +IG G Sbjct: 238 HVPTGTVVAIQDERSQHQNKAKALKVLRARLYEIERHRLHMDRSKLRSE--QIGSGDRSE 295 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351 +IR+Y P V D R I S DV++G+ LD F+ A L Sbjct: 296 RIRTYNF-PQGRVTDHRVGITHHSIEDVMEGESLDIFIDALL 336 >gi|218196470|gb|EEC78897.1| hypothetical protein OsI_19275 [Oryza sativa Indica Group] gi|222630945|gb|EEE63077.1| hypothetical protein OsJ_17885 [Oryza sativa Japonica Group] Length = 368 Score = 182 bits (461), Expect = 9e-44, Method: Composition-based stats. Identities = 122/342 (35%), Positives = 185/342 (54%), Gaps = 15/342 (4%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA-L 77 QR ++L + P + E +E L++ + I+E++ + + L L Sbjct: 20 IEQRSAYLQEQINQPD--ASPEEYSRANKELHKLESTMDMIEELRSKQEEIEGLKSLMTN 77 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQDW 133 ++ + + L + E + Q + EAD D LEV AG GG E+ + Sbjct: 78 SVEEKDFREMAAQELLQALEEEKQLQHKLFRSLLPKDEADERDCILEVRAGTGGEEASLF 137 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A + +MY ++++K +K +A++I + G K A+ I GP AYG LK E G+HR+ R+ Sbjct: 138 AMDIFKMYEKYSQKNGWKFDAIDIMESALKGYKEASGTISGPGAYGKLKFESGIHRVQRV 197 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 + + R HTS S+ + P D +++++ D RIDTYR+ G+GGQ VNTTDSAVRIT Sbjct: 198 PVTEKSGRVHTSAVSVAILPQ-ADEVDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRIT 256 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H+PTG VV Q ERSQH+NKA+A +LRA+LYE+E + + S +IG G Sbjct: 257 HVPTGTVVAIQDERSQHQNKAKALKVLRARLYEIERHRLHMDRSKLRSE--QIGSGDRSE 314 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351 +IR+Y P V D R I S DV++G+ LD F+ A L Sbjct: 315 RIRTYNF-PQGRVTDHRVGITHHSIEDVMEGESLDIFIDALL 355 >gi|39938500|ref|NP_950266.1| protein chain release factor A [Onion yellows phytoplasma OY-M] gi|81565140|sp|Q6YRK0|RF1_ONYPE RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|39721609|dbj|BAD04099.1| protein chain release factor A [Onion yellows phytoplasma OY-M] Length = 351 Score = 182 bits (461), Expect = 9e-44, Method: Composition-based stats. Identities = 99/347 (28%), Positives = 167/347 (48%), Gaps = 15/347 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D Q+ L + QN+ + +++ L+ + + + Sbjct: 1 MLDRLKIIKQKYQDLQKLLLNE---QNINQKIDILKNLSKLEPTVELFNRYLNLETEFTQ 57 Query: 72 LLELALEEDDCSILQETSDNLQRI----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + + + D +L I K ++ + L D + LE+ +GG Sbjct: 58 IQTILKTQQDQELLLLAHQEKDTILSEKKTTLDQLKILLLPQDPFDKKNVVLEIKGASGG 117 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A LLR Y ++AE +K+K E L ++ + G+ S LLI G N Y +LK E GV Sbjct: 118 NEANLFAADLLRTYVKYAESKKWKVEILNLNPSIKGGLSSVELLISGKNIYSFLKYESGV 177 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS + + V P ++ I D R DT+ +SG GGQ VNTT Sbjct: 178 HRVQRVPATEAQGRIHTSTAVVLVVPEAEELELK-IDWHDIRTDTFNSSGPGGQSVNTTK 236 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+THIP+G+ V CQ+ +SQH+NK +A+ +L+ ++Y L ++E N K +G Sbjct: 237 SAVRLTHIPSGISVACQEGKSQHENKDKAFTILKTRIYNQMLTAKQEEENKH--RKNLVG 294 Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G + IR+Y P + D R + +++G LD ++ + Sbjct: 295 TGERSEKIRTYNY-PQNRITDHRIGLTLQKLDIIMEGKLDLVIEPLI 340 >gi|48926665|gb|AAT47454.1| putative peptide chain release factor [Oryza sativa Japonica Group] Length = 350 Score = 181 bits (460), Expect = 9e-44, Method: Composition-based stats. Identities = 122/342 (35%), Positives = 185/342 (54%), Gaps = 15/342 (4%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA-L 77 QR ++L + P + E +E L++ + I+E++ + + L L Sbjct: 2 IEQRSAYLQEQINQPD--ASPEEYSRANKELHKLESTMDMIEELRSKQEEIEGLKSLMTN 59 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQDW 133 ++ + + L + E + Q + EAD D LEV AG GG E+ + Sbjct: 60 SVEEKDFREMAAQELLQALEEEKQLQHKLFRSLLPKDEADERDCILEVRAGTGGEEASLF 119 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A + +MY ++++K +K +A++I + G K A+ I GP AYG LK E G+HR+ R+ Sbjct: 120 AMDIFKMYEKYSQKNGWKFDAIDIMESALKGYKEASGTISGPGAYGKLKFESGIHRVQRV 179 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 + + R HTS S+ + P D +++++ D RIDTYR+ G+GGQ VNTTDSAVRIT Sbjct: 180 PVTEKSGRVHTSAVSVAILPQ-ADEVDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRIT 238 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H+PTG VV Q ERSQH+NKA+A +LRA+LYE+E + + S +IG G Sbjct: 239 HVPTGTVVAIQDERSQHQNKAKALKVLRARLYEIERHRLHMDRSKLRSE--QIGSGDRSE 296 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351 +IR+Y P V D R I S DV++G+ LD F+ A L Sbjct: 297 RIRTYNF-PQGRVTDHRVGITHHSIEDVMEGESLDIFIDALL 337 >gi|291243180|ref|XP_002741481.1| PREDICTED: CG5705-like [Saccoglossus kowalevskii] Length = 411 Score = 181 bits (460), Expect = 1e-43, Method: Composition-based stats. Identities = 101/349 (28%), Positives = 174/349 (49%), Gaps = 15/349 (4%) Query: 12 GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F + + + K L R + L + +K+ +++ + Sbjct: 44 RMF-FKKIKNEYDDIQKDLLSESASITGSKLKNLHRRKLELLPIVDLLKKWEEKNVELEE 102 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL-----SGEADSNDAYLEVHAGAG 126 + L + +D ++ + + + + E + D++D +E+ AG G Sbjct: 103 INILLQDSNDNEMISLAKEEKLEMMAAIRELEDEIFSLLVPKDEDDDTSDVLVEISAGVG 162 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E+ +A + MY R+A ++++ + L++ + GI+ AT+ + GP Y ++K E G Sbjct: 163 GQEAMLFAAEMFEMYQRYAHFQRWQFDVLDVGKSDIGGIRHATVSVSGPGVYSYMKYEGG 222 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ + R HTS ++ V P I+++I SD +I+T RASGAGGQHVNTT Sbjct: 223 VHRVQRVPKTEKQGRVHTSTMTVAVLP-QPREIDLQIKPSDLKIETKRASGAGGQHVNTT 281 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRI H+PTG+ +CQQERSQ KNKA A +L +LY +L++++ I K ++ Sbjct: 282 DSAVRIVHLPTGIAAECQQERSQIKNKAMAMKVLETRLYNKQLEEQQHIQRQS--RKLQV 339 Query: 307 ---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKAT 350 G +IR+Y + D R + L G DL+D +++ Sbjct: 340 GSSGRSEKIRTYNFN-QDRITDHRIGQHLHNIDGFLSGGDDLNDLIESL 387 >gi|307104974|gb|EFN53225.1| hypothetical protein CHLNCDRAFT_25946 [Chlorella variabilis] Length = 360 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 100/348 (28%), Positives = 180/348 (51%), Gaps = 16/348 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLIL 72 + + L + DP + N + L+R + +A+ K+++ +L D L Sbjct: 10 LEETEKSFKELQERMADPEVSGNNTGYQKLVRAVSDIQDAVDGYTAYKDLERQLADAKEL 69 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD--SNDAYLEVHAGAGGTES 130 L+ + + + + L + +E + ++ + LL + + LEV AG GG E+ Sbjct: 70 LKESEGDPEMAELAREEMEALQAAIEQQGERLKYLLLPKDPLDEKNIMLEVRAGTGGEEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L+RMY ++A+ + +K + E G K L I G LK E GVHR+ Sbjct: 130 ALWAADLIRMYQKYADTQGWKVSLMSESSAEAGGYKECVLQITGD---RQLKYESGVHRV 186 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +++ R HTS +++ + P D + ++I D + T RA GAGGQ+VN ++AV Sbjct: 187 QRVPATETSGRVHTSTATVAIMP-EVDDVAVKIDPKDIALTTARAGGAGGQNVNKVETAV 245 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ + CQ+ER+Q +N+ +A +LRAKL+ELEL+K+ I K+++G G Sbjct: 246 DLMHKPTGIRIFCQEERTQGRNRERAMALLRAKLFELELEKQRSE--ISARRKSQVGTGS 303 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +I++Y + + D R+ I + V++G LD+ ++ + + + Sbjct: 304 RSEKIKTYNYKD-TRMSDHRSKI-NYDLNKVMEGALDECIQTMVMLDQ 349 >gi|294660260|ref|NP_852919.2| peptide chain release factor 1 [Mycoplasma gallisepticum str. R(low)] gi|46576715|sp|Q7NBX3|RF1_MYCGA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|284811917|gb|AAP56487.2| Peptide chain release factor 1 [Mycoplasma gallisepticum str. R(low)] gi|284930381|gb|ADC30320.1| Peptide chain release factor 1 [Mycoplasma gallisepticum str. R(high)] Length = 360 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 99/345 (28%), Positives = 163/345 (47%), Gaps = 14/345 (4%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 LN + E L + + +E + + + + L ++ Sbjct: 13 AIRATAQKLNKELES--LTNDFKRIHAINKELKQKKQLLEVFELYDKLVVSGLEAEKIIN 70 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQDW 133 + + +L K ++ + + + D + +E+ AGG ES + Sbjct: 71 DNAMKEFHELAILDLDAAKEQIPDLEEKLKVLLLPADPNDDKEVIVEMRPAAGGDESSIF 130 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 + +Y + K +K +E+ G + I G + Y +K E GVHR+ R+ Sbjct: 131 VGNMFDLYKEYCSKHNWKINVIEMLPTSV-GYSFISFEINGEDVYSKMKFESGVHRVQRV 189 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 ++ R HTS +I V P D +EIEI+ +D RIDTYRASGAGGQHVN T+SAVRIT Sbjct: 190 PATEAKGRVHTSTITIAVLPQ-QDDVEIEINPADLRIDTYRASGAGGQHVNRTESAVRIT 248 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 HIPTG+V CQ+ +SQ N+ A MLR+KL+E +++ + + K ++G G Sbjct: 249 HIPTGIVAACQEGKSQIANRETAMKMLRSKLWEAAEKEKNDALSAL--RKNQVGSGDRAE 306 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ S + G++D+ + A + ++ Sbjct: 307 KIRTYNY-PQNRVTDHRINMSLNSLDRFMMGEIDEMIDALRSKEQ 350 >gi|284931146|gb|ADC31084.1| Peptide chain release factor 1 [Mycoplasma gallisepticum str. F] Length = 360 Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 99/345 (28%), Positives = 163/345 (47%), Gaps = 14/345 (4%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 LN + E L + + +E + + + + L ++ Sbjct: 13 AIRATAQKLNKELES--LTNDFKRIHAINKELKQKKQLLEVFELYDKLVVSGLEAEKIIN 70 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQDW 133 + + +L K ++ + + + D + +E+ AGG ES + Sbjct: 71 DNTMKEFHELAILDLDAAKEQIPDLEEKLKVLLLPADPNDDKEVIVEMRPAAGGDESSIF 130 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 + +Y + K +K +E+ G + I G + Y +K E GVHR+ R+ Sbjct: 131 VGNMFDLYKEYCSKHNWKINVIEMLPTSV-GYSFISFEINGEDVYSKMKFESGVHRVQRV 189 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 ++ R HTS +I V P D +EIEI+ +D RIDTYRASGAGGQHVN T+SAVRIT Sbjct: 190 PATEAKGRVHTSTITIAVLPQ-QDDVEIEINPADLRIDTYRASGAGGQHVNRTESAVRIT 248 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 HIPTG+V CQ+ +SQ N+ A MLR+KL+E +++ + + K ++G G Sbjct: 249 HIPTGIVAACQEGKSQIANRETAMKMLRSKLWEAAEKEKNDALSAL--RKNQVGSGDRAE 306 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ S + G++D+ + A + ++ Sbjct: 307 KIRTYNY-PQNRVTDHRINMSLNSLDRFMMGEIDEMIDALRSKEQ 350 >gi|326403021|ref|YP_004283102.1| peptide chain release factor 1 [Acidiphilium multivorum AIU301] gi|325049882|dbj|BAJ80220.1| peptide chain release factor 1 [Acidiphilium multivorum AIU301] Length = 352 Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 105/346 (30%), Positives = 162/346 (46%), Gaps = 15/346 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA---ISFIKEIQDRLCDNLIL 72 D V R L + RE ++ I ++ + + Sbjct: 7 LDRIVLRAEELRAMLAAG---VDGERFVAASRELAEIEPVEQQILLLRAAERARDEAEAA 63 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + ++ + L AD A LE+ AGG E+ Sbjct: 64 RVDPELRELADAELDSLRETLPRLEH--EIRLALLPRDAADERPAILEIRPAAGGDEAAL 121 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L Y R+A+ R ++ E L+ + E G++ I G + LK E GVHR+ R Sbjct: 122 FAAELFAAYRRYADLRGWRFEILDYTETELGGLREGIAEITGRAVFARLKFESGVHRVQR 181 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + ++ R HTS ++ V P + +++E++E+D RID +RASGAGGQHVN T+SAVRI Sbjct: 182 VPATETQGRIHTSTVTVAVLP-EAEDVDVEVNEADLRIDVFRASGAGGQHVNKTESAVRI 240 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309 TH+PTG+VV Q+ERSQHKN+A+A +LRA+LY E + A K+++G G Sbjct: 241 THLPTGIVVAMQEERSQHKNRAKAMKILRARLY--EQTRAAAAAGRAADRKSQVGTGDRS 298 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ V+ G+ D+ + A + Sbjct: 299 ERIRTYNF-PQGRVTDHRINLTLHKIDRVMLGEFDEIIDALTEEDQ 343 >gi|85057288|ref|YP_456204.1| peptide chain release factor 1 [Aster yellows witches'-broom phytoplasma AYWB] gi|84789393|gb|ABC65125.1| bacterial peptide chain release factor 1 [Aster yellows witches'-broom phytoplasma AYWB] Length = 351 Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 100/347 (28%), Positives = 168/347 (48%), Gaps = 15/347 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + D Q+ L + QN+ + + + L+ + + + + Sbjct: 1 MLDRLKKIKQKYQDLQKLLLNE---QNITQKIDIFKNLSKLEPTVELFNRYLNLETEFIQ 57 Query: 72 LLELALEEDDCSILQETSDNLQRI----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + + E D +L I K+ +E + L D + LE+ AGG Sbjct: 58 VQTILETEQDQELLLLARQEKDTILSKKKITLEKLKILLLPQDPFDKKNVVLEIKGAAGG 117 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A LLR Y ++AE +K+K E L ++ + G+ S LLI G N Y +LK E GV Sbjct: 118 NEANLFAADLLRTYVKYAESKKWKVEILNLNPSIKGGLSSVELLISGKNIYSFLKYESGV 177 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS + + V+P ++ I D R DT+ +SG GGQ VNTT Sbjct: 178 HRVQRVPTTEAQGRIHTSTAVVLVFPEAEELELK-IDWHDIRTDTFNSSGPGGQSVNTTK 236 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVR+TH+P+G+ V CQ+ +SQH+NK +A+ +L+ ++Y L ++E K +G Sbjct: 237 SAVRLTHVPSGISVACQEGKSQHENKDKAFTLLKTRIYNQMLNIKQEEEKTH--RKKLVG 294 Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 G + IR+Y P + D R + +++G LD ++ + Sbjct: 295 TGERSEKIRTYNY-PQNRITDHRIGLTLQKLDIIMEGKLDLVIEPLI 340 >gi|189347853|ref|YP_001944382.1| peptide chain release factor 2 [Chlorobium limicola DSM 245] gi|189342000|gb|ACD91403.1| peptide chain release factor 2 [Chlorobium limicola DSM 245] Length = 249 Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 128/246 (52%), Positives = 175/246 (71%), Gaps = 1/246 (0%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 +LSG+ D +A + +HAGAGGTE+QDWA +L RMY RWAE++ FK + +G+ AGIK Sbjct: 1 MLSGKDDPGNAIITIHAGAGGTEAQDWAEILYRMYMRWAERKGFKVYTDDYQEGDGAGIK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 +ATL I+G AYG+LK E GVHRLVR+SP+DSN+RRHTSF+S++ YP +EI++ + Sbjct: 61 TATLEIQGQYAYGYLKAENGVHRLVRVSPFDSNARRHTSFASVYTYPEAPPDVEIDVRKE 120 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D + T+R+ G GGQ+VN ++AVRI HIP+G+VV CQQERSQ +N+ +A ML A+LY+ Sbjct: 121 DLELSTFRSGGKGGQNVNKVETAVRIKHIPSGIVVGCQQERSQFQNRERAMKMLMAQLYQ 180 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 + ++ E E K +I WG QIRSYVL + +KD RTN E+ VLDGDLD F Sbjct: 181 RQREEEEAKKREIEGKKKKIEWGSQIRSYVLDD-RRIKDHRTNYERFDIETVLDGDLDAF 239 Query: 347 MKATLA 352 M+ L+ Sbjct: 240 MEKYLS 245 >gi|320533186|ref|ZP_08033906.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 171 str. F0337] gi|320134600|gb|EFW26828.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 171 str. F0337] Length = 340 Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 109/326 (33%), Positives = 159/326 (48%), Gaps = 11/326 (3%) Query: 37 QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK 96 + + L R L +S + Q D + ELA E++D + Sbjct: 4 ADPGAMRRLGRRYAELGRVVSAYRAWQAASADLADVRELAAEDEDFAAEVPAL-ETAEAA 62 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 ++ + D+ D +EV AG GG ES +A+ L RMY+R+AE++ + E L+ Sbjct: 63 AGEHLREVL-VPRDPDDARDVIIEVKAGEGGEESALFASDLARMYSRYAERQGWAVEVLD 121 Query: 157 IHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 D + G K L I + LK E GVHR+ R+ +S R HTS + + Sbjct: 122 ATDSDLGGYKDVRLAIKTRGPTEPQDGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGV 181 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P DD E++I +D RID +R+SG GGQ VNTTDSAVRITH+PTG+VV Q E+SQ Sbjct: 182 LVMPEADDPGELQIDAADLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSMQNEKSQ 241 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRT 328 +NK A +LRA+L A S+ + +IR+Y P + D RT Sbjct: 242 LQNKEAAMRVLRARLLAERAAAAAAEAAQARRSQVRTVDRSERIRTYNF-PENRIADHRT 300 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354 + + VLDGDL + + +A+ Sbjct: 301 GFKAYNLDAVLDGDLGPVIASAIAMD 326 >gi|225437801|ref|XP_002274067.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297744098|emb|CBI37068.3| unnamed protein product [Vitis vinifera] Length = 392 Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 118/350 (33%), Positives = 180/350 (51%), Gaps = 18/350 (5%) Query: 19 AVQRLSFLNTKTE-DPHLWQNVI----EAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 QRLS + ++ E +E + L ++I I E++++ + L Sbjct: 28 MEQRLSAIEHRSAYLQDFINRPEASPVEYARANKELRKLRSSIEHITELRNKQKEIDGLK 87 Query: 74 ELALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 L E + + + + K L EAD D LEV AG GG Sbjct: 88 SLMAECSEDKDMLNMAAEELGQAAEEEKRLQNLLLKSLLPKDEADERDCILEVRAGTGGE 147 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A + +MY ++++K +K E ++I + + G K A+ I G YG LK E G+H Sbjct: 148 EASLFAMDIFKMYEKYSQKNGWKFEVVDITESDLKGYKEASGAISGSGVYGKLKFESGIH 207 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ + + R HTS S+ + P D +++++ D RIDTYR+ G+GGQH NTT+S Sbjct: 208 RVQRVPVTEKSGRVHTSAVSVAILPQ-ADEVDVQLRNEDLRIDTYRSGGSGGQHANTTNS 266 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVRITHIP+G+ V Q ERSQH NKA+A +L AKLYE+E + ++ + +IG Sbjct: 267 AVRITHIPSGMTVAIQDERSQHMNKAKALKVLCAKLYEIERSRIQKDRSKLRME--QIGS 324 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354 G +IR+Y P V D R I S +DV+ G+ LD F+ A L + Sbjct: 325 GDRSERIRTYNF-PQGRVTDHRVGITHHSVNDVMQGENLDVFIDALLLQQ 373 >gi|296393116|ref|YP_003658000.1| peptide subunit release factor 1 [Segniliparus rotundus DSM 44985] gi|296180263|gb|ADG97169.1| peptide chain release factor 1 [Segniliparus rotundus DSM 44985] Length = 354 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 117/346 (33%), Positives = 173/346 (50%), Gaps = 15/346 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + L + DP L +V AK + + L + ++ +L Sbjct: 5 LPELIAEYESLQKRWADPSLQDDVSAAKKIGKRVAELGPVYEAHTQ-REAARADLAAAHE 63 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 E D +E RI D +D LEV +GAGG ES +A Sbjct: 64 LAELDPEFGREEVERLTGRIHELDAALAELLAPRDPHDGDDVVLEVKSGAGGEESALFAG 123 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG--------PNAYGWLKGEQGV 187 L+RMYT++AE+R+++ E L + + + G+K AT+ IK + WLK E GV Sbjct: 124 DLMRMYTKFAERRRWRVEVLSMAESDLGGVKDATISIKRTGGDQSPANGVWAWLKHEGGV 183 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ +S R HTS + + YP +D+ +I I E++ RID YR+SG GGQ VNTTD Sbjct: 184 HRVQRVPATESQGRIHTSAAGVLAYPEPEDAPDIVIDETELRIDVYRSSGKGGQGVNTTD 243 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI- 306 SAVRITH+PTG+VV CQ ERSQ +NKA+A +L A+L +L ++ + A K +I Sbjct: 244 SAVRITHLPTGLVVTCQNERSQLQNKARAMVVLAARLEQL--REEKAAAEAASGRKEQIR 301 Query: 307 --GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P + D R + + VL+GDL+ + Sbjct: 302 TVDRSERIRTYNF-PENRITDHRIGYKANNLDMVLEGDLEAMLSEL 346 >gi|260220347|emb|CBA27793.1| Peptide chain release factor 1 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 329 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 108/265 (40%), Positives = 147/265 (55%), Gaps = 14/265 (5%) Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 Q L D+ A++E+ AG GG ES +A L RMYTR+ + + +TE + + Sbjct: 55 ELQRMLLPKDPDDARPAFVEIRAGTGGDESALFAVDLARMYTRYCDAKGLRTEIMSASES 114 Query: 161 EEAGIKSATLLIK--------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E G K L I+ AYG LK E G HR+ R+ ++ R HTS +I V Sbjct: 115 ELGGYKEVVLRIEGSTTTSAGSCGAYGMLKFESGGHRVQRVPATETQGRIHTSACTIAVL 174 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 D++ I+I+ SD RIDTYRASGAGGQH+N TDSAVRITHIPTG+V +CQ RSQH N Sbjct: 175 AEQDEAEAIKINPSDLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVAECQDGRSQHSN 234 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTN 329 KAQA +L A++ E + E A K+ +G G +IR+Y P + D R N Sbjct: 235 KAQALKVLTARI--HEKDRSERAAKDAAERKSLVGSGDRSDRIRTYNY-PQGRLTDHRIN 291 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 + ++GDLDD ++A A + Sbjct: 292 LTLYKLDRAMEGDLDDVIEALQAYE 316 >gi|326771965|ref|ZP_08231250.1| peptide chain release factor 1 [Actinomyces viscosus C505] gi|326638098|gb|EGE38999.1| peptide chain release factor 1 [Actinomyces viscosus C505] Length = 364 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 111/346 (32%), Positives = 165/346 (47%), Gaps = 12/346 (3%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 + + + + + P + L R L ++ + Q D ELA Sbjct: 9 EPLLAEYADIEAEMAGPAAAD-PGAMRRLGRRYAELGRVVAAYRAWQSASADLADARELA 67 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 E++D + + + E + + DS D +EV AG GG ES +A+ Sbjct: 68 AEDEDFAAEVPALEAAEAAAGEHLREVL--VPRDPDDSRDVIIEVKAGEGGEESALFASD 125 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHR 189 L RMY+R+AE++ + E L+ D + G K L I + LK E GVHR Sbjct: 126 LARMYSRYAERQGWAVEVLDATDSDLGGYKDVRLAIKARGPVEPQDGVWAHLKYEGGVHR 185 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS + + V P DD E++I +D RID +R+SG GGQ VNTTDSA Sbjct: 186 VQRVPVTESQGRIHTSAAGVLVMPEADDPGELQIDAADLRIDVFRSSGPGGQSVNTTDSA 245 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308 VRITH+PTG+VV Q E+SQ +NK A +LRA+L A S+ + Sbjct: 246 VRITHLPTGIVVSMQNEKSQLQNKEAAMRVLRARLLAERAAAAAAEAAQARRSQVRTVDR 305 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RT + + VLDGDL + + +A+ Sbjct: 306 SERIRTYNF-PENRIADHRTGFKAYNLDAVLDGDLGPVIASAIAMD 350 >gi|297183483|gb|ADI19614.1| protein chain release factor a [uncultured SAR11 cluster bacterium HF0770_37D02] Length = 358 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 111/334 (33%), Positives = 176/334 (52%), Gaps = 14/334 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V L + ++ + + +E ++ I+ + D + L ++ Sbjct: 7 VKSIVNTYKTLEKELASGNI--DKKDFVKKSKEYSSIEEVINEARGYIDFGKEKKELEKI 64 Query: 76 ALEEDDCSILQETSDNLQRIK-----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E+D + + ++N + + L EAD+ +A LE+ AG GG E+ Sbjct: 65 IDEKDGDKEMIKLAENELIQLSKKKSEYEQKLKIYLLPKDEADAKNAILEIRAGTGGLEA 124 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 + L +MY + K+K+ E + I E G K LLIKG N Y +LK E GVHR+ Sbjct: 125 TLFVADLYKMYEKVCLKKKWLLEIINISKSEAGGFKEVILLIKGNNIYSFLKFESGVHRV 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + ++I+I+E D RID +R+SG GGQ VNTTDSAV Sbjct: 185 QRVPKTETQGRVHTSAATVAVLP-EAEEVDIKINEKDLRIDVFRSSGPGGQSVNTTDSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+P+GVVV Q E+SQHKN+A+A +LR+++YE E +K+++ K +IG G Sbjct: 244 RITHLPSGVVVSQQDEKSQHKNRAKAMKILRSRVYENEREKKDKER--SRDRKNQIGSGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 +IR+Y P V D R N+ + L+G Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLHKLEEFLNG 334 >gi|313606725|gb|EFR83443.1| peptide chain release factor 1 [Listeria monocytogenes FSL F2-208] Length = 309 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 99/302 (32%), Positives = 166/302 (54%), Gaps = 8/302 (2%) Query: 58 FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSND 116 K + +++ + LL L+++ + +E LQ+ K ++E + + + D + Sbjct: 1 EYKNVNEQINETKELLGEKLDDEMREMAKEEFAELQKEKADLEERLKLLLVPKDPNDDKN 60 Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 LE+ AGG E+ +A L RMY+++AE R +K E ++ + G K ++ G + Sbjct: 61 VILEIRGAAGGDEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGND 120 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 A+ +K E G HR+ R+ +S R HTS +++ + P + +EIE+ + D R DT+ ++ Sbjct: 121 AFSRMKYENGAHRVQRVPETESGGRIHTSTATVAILP-EAEEVEIELHDKDIRTDTFAST 179 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 GAGGQ VNTT SAVR+THIPTG+VV Q ERSQ KNK +A +LRA++Y+ +RE Sbjct: 180 GAGGQSVNTTMSAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKF--EREARE 237 Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + K+ +G G +IR+Y P V D R + +++G LD+ + A + Sbjct: 238 EYDANRKSAVGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILE 296 Query: 354 KK 355 + Sbjct: 297 DQ 298 >gi|149038509|gb|EDL92839.1| rCG41113 [Rattus norvegicus] Length = 384 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 158/305 (51%), Gaps = 9/305 (2%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L A + E + L D LL E+ E + + I + S Sbjct: 67 QLAAAARLLNEKERELRDTESLLHDENEDLKKLAESEIALCQKEIAELKHRIISLLVPSE 126 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 + D +D LEV AG GG E+ + + + MY ++A +++ E LE E G++ A+ Sbjct: 127 DMDGSDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSELGGLRHASA 186 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I GP AY +K E GVHR+ R+ + R HTS ++ + P I++ I+ D RI Sbjct: 187 SIGGPEAYRHMKFEGGVHRVQRVPKTERQGRIHTSTMTVAILP-QPTEIKLVINPKDLRI 245 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT RASGAGGQHVNTTDSAVRI H+PTG++ +CQQERSQ KN+ A LRA+LY + L+ Sbjct: 246 DTKRASGAGGQHVNTTDSAVRIVHLPTGIISECQQERSQLKNRELAMKKLRARLYSMRLE 305 Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345 EE A + K ++ G +IR+Y P V D R N + GD LDD Sbjct: 306 --EETAKRYSARKIQVGTKGRSEKIRTYNF-PQNRVTDHRINKSLHDLESFMQGDCLLDD 362 Query: 346 FMKAT 350 +++ Sbjct: 363 LIQSL 367 >gi|28493402|ref|NP_787563.1| peptide chain release factor RF-1 [Tropheryma whipplei str. Twist] gi|28572487|ref|NP_789267.1| peptide chain release factor 1 [Tropheryma whipplei TW08/27] gi|28410619|emb|CAD67005.1| peptide chain release factor 1 [Tropheryma whipplei TW08/27] gi|28476443|gb|AAO44532.1| peptide chain release factor RF-1 [Tropheryma whipplei str. Twist] Length = 347 Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats. Identities = 109/351 (31%), Positives = 163/351 (46%), Gaps = 16/351 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ D ++ S + + + E K L L + +E Q D Sbjct: 1 MFETIDTLLREHSIIEDRLSRCD--ASPSEMKDLSLRYSKLSRVKAAYEEFQKISLDLSA 58 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ELA ++ + E D D +E+ G GG ES Sbjct: 59 ARELADDDPGFLVEIPVLTEKLSDAQARLQSLL--TRRDENDHRDVIMEIKGGEGGAESA 116 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQG 186 +A LLRMY +A+ +K E L + G K L I+ + LK E G Sbjct: 117 LFAADLLRMYAYFADSNGWKVEILSYSENTLGGYKDVQLAIRKTPSSTHGVWELLKYEGG 176 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S R HTS + + V+P VD EIEI+ + RID +R+SG GGQ VNTT Sbjct: 177 VHRVQRVPATESQGRIHTSTTGVLVFPEVDAPGEIEITNDEIRIDVFRSSGPGGQSVNTT 236 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVRITH+PTG+VV CQ E+SQ +N+ A +LRA+L + ++ E + K++I Sbjct: 237 DSAVRITHLPTGIVVSCQNEKSQIQNRESAMRILRARL--IAKRQDEIEKTTHAARKSQI 294 Query: 307 ---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P V D RT + + VL+GD+ +++ + Sbjct: 295 RAMDRSERIRTYNF-PENRVVDHRTGYKAYNLDQVLNGDVSQLIRSCIEAD 344 >gi|30425080|ref|NP_780583.1| peptide chain release factor 1-like, mitochondrial precursor [Mus musculus] gi|81874010|sp|Q8BJU9|RF1ML_MOUSE RecName: Full=Peptide chain release factor 1-like, mitochondrial; AltName: Full=Mitochondrial translational release factor 1-like; Flags: Precursor gi|26347595|dbj|BAC37446.1| unnamed protein product [Mus musculus] gi|74186873|dbj|BAE20502.1| unnamed protein product [Mus musculus] gi|148671619|gb|EDL03566.1| mitochondrial translational release factor 1-like [Mus musculus] Length = 373 Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 159/305 (52%), Gaps = 9/305 (2%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L A + E + L D LL E+ E + ++I + S Sbjct: 56 QLAAAARLLSEKERELRDTESLLHDENEDLKKLAESEIALCQKQITELKHQIISLLVPSE 115 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D +D LEV AG GG E+ + + + MY ++A +++ E LE E G++ A+ Sbjct: 116 EMDGSDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSELGGLRHASA 175 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 + GP AY +K E GVHR+ R+ + R HTS ++ + P I++ I+ D RI Sbjct: 176 SVGGPEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILP-QPTEIKLVINPKDLRI 234 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT RASGAGGQHVNTTDSAVRI H+PTG++ +CQQERSQ KN+ A LRA+LY + L+ Sbjct: 235 DTKRASGAGGQHVNTTDSAVRIVHLPTGIISECQQERSQLKNRELAMKKLRARLYSMHLE 294 Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345 EE A + K ++ G +IR+Y P V D R N + GD LDD Sbjct: 295 --EETAKRYNARKIQVGTKGRSEKIRTYNF-PQNRVTDHRINKSLHDLESFMQGDCLLDD 351 Query: 346 FMKAT 350 +++ Sbjct: 352 MIQSL 356 >gi|126311212|ref|XP_001381267.1| PREDICTED: similar to Mitochondrial translational release factor 1-like [Monodelphis domestica] Length = 567 Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 156/305 (51%), Gaps = 9/305 (2%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L A ++E + L + LLE E+ E + + + + S Sbjct: 66 ELAMAARKLREKEQELQEIERLLEDENEDLRKLAENEIISCQKELTKLKQKIILLLIPSE 125 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D ND LE+ AG GG E+ + + MY R+A +K+ E LE E G++ A+ Sbjct: 126 ETDENDLILELTAGVGGQEAMLFTAEMFDMYQRYATYKKWHFEILEYFPSEIGGLRHASA 185 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I GP AY +K E GVHR+ R+ + R HTS ++ + P I + I+ + RI Sbjct: 186 SIGGPEAYRHMKFEGGVHRVQRVPKTEKQGRMHTSTMTVAILP-QPTEINLVINPKELRI 244 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 +T RASGAGGQHVNTTDSAVRI H+PTGV +CQQERSQ KNK A LRAKLY + L+ Sbjct: 245 ETKRASGAGGQHVNTTDSAVRIVHLPTGVATECQQERSQIKNKEMAMKKLRAKLYSMLLE 304 Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345 EE + K +I G +IR+Y P V D R + + G+ LD+ Sbjct: 305 --EETNKRYSARKIQIGTKGRSEKIRTYHF-PQNRVTDHRISKSLYDIQSFMLGEYLLDE 361 Query: 346 FMKAT 350 +++ Sbjct: 362 LIQSL 366 >gi|296199479|ref|XP_002747187.1| PREDICTED: peptide chain release factor 1-like, mitochondrial [Callithrix jacchus] Length = 382 Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats. Identities = 113/305 (37%), Positives = 155/305 (50%), Gaps = 9/305 (2%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L + + E + L + LL E+ E + + I + S Sbjct: 63 ELVAVVKLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D ND LEV AG GG E+ + + + MY R+A +++ E LE E G++ A+ Sbjct: 123 ETDENDLILEVTAGVGGQEAMLFTSEMFDMYQRYAAFKRWHFETLEYFPSEIGGLRHASA 182 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G AY +K E GVHR+ R+ + R HTS ++ + P I + I+ D RI Sbjct: 183 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILP-QPTEINLVINPKDLRI 241 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK A LRAKLY + L+ Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMKKLRAKLYSMHLE 301 Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345 EE + K +I G +IR+Y P V D R + + GD LD+ Sbjct: 302 --EETNKRDNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRISKSLHDLQTFMQGDYLLDE 358 Query: 346 FMKAT 350 +++ Sbjct: 359 LVQSL 363 >gi|219119372|ref|XP_002180448.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407921|gb|EEC47856.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 358 Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats. Identities = 96/348 (27%), Positives = 169/348 (48%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + L + DP + + + +M +R ++ + +E + EL Sbjct: 5 LDGIRRSYQALTERLADPDVINDSNLLRQVMTDRSQIEEVVMVFEEYVALQEELSGAKEL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + D ++E + + + E + L D+ + LE+ AG GG+E+ Sbjct: 65 FQDAGDDPDMKEMARDEMKAIEPQLDSLEEKIKVLLLPKDPNDARNVMLEIRAGTGGSEA 124 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL +Y ++ + +++ ++ G++ G K+ L IKG Y LK E GVHR+ Sbjct: 125 NIFAGDLLDVYRKYISTQGWQSNLIDSSSGDDGGYKNVVLDIKGDMVYSKLKWEAGVHRV 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ + P D+ ++I+I + + T R+ GAGGQ+VN ++AV Sbjct: 185 QRVPATESQGRVHTSTATVAIMPECDE-VDIKIDPKEIEMSTMRSGGAGGQNVNKVETAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ ++C QERSQ KNK A ML AKLY++E +KRE +++G G Sbjct: 244 DLLHKPTGIRIKCTQERSQLKNKELAMKMLMAKLYDMENEKREMEERARRG--SQVGTGG 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + D R + + L GD+ + +A + Sbjct: 302 RSEKIRTYNWKD-SRCSDHRLG-QNFPLAQFLSGDIGSMHDSMIAKDQ 347 >gi|68171151|ref|ZP_00544559.1| Peptide chain release factor 2 [Ehrlichia chaffeensis str. Sapulpa] gi|67999421|gb|EAM86062.1| Peptide chain release factor 2 [Ehrlichia chaffeensis str. Sapulpa] Length = 221 Score = 179 bits (455), Expect = 4e-43, Method: Composition-based stats. Identities = 130/217 (59%), Positives = 167/217 (76%), Gaps = 1/217 (0%) Query: 136 MLLRMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 ML RMY RWAE FKTE + DGEE G+KSAT+ + G NAYGW K E G+HRLVRIS Sbjct: 1 MLFRMYVRWAEIYHNFKTEIVHKLDGEEVGVKSATIKVIGDNAYGWAKTESGIHRLVRIS 60 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P++SN++RHT+FSSI V PV+++ IEI + D RIDTYRASGAGGQHVN T+SAVRITH Sbjct: 61 PFNSNAKRHTTFSSILVSPVINEDTNIEILDKDLRIDTYRASGAGGQHVNKTESAVRITH 120 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 IP+G+VVQCQ RSQH+N A+A N+L+++LY+L+LQ++E+ + + IGWG QIRS Sbjct: 121 IPSGIVVQCQNNRSQHQNLAEAHNLLKSRLYQLKLQEKEKKMAEEHNKRCNIGWGNQIRS 180 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 YV+ PYQMVKD+RT E + + VLDG+LD F+ + L Sbjct: 181 YVMHPYQMVKDIRTGHEIGNVNSVLDGNLDSFIISAL 217 >gi|223997436|ref|XP_002288391.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220975499|gb|EED93827.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 366 Score = 179 bits (455), Expect = 5e-43, Method: Composition-based stats. Identities = 94/348 (27%), Positives = 164/348 (47%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + L + DP + + + +M++R + + E + EL Sbjct: 11 LDGIRRSFQALTERLADPDVIADSNLLRQVMKDRSQSEETVQAFDEYCQLETELEGAQEL 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEY-----KQFESLLSGEADSNDAYLEVHAGAGGTES 130 E D ++E + + + + L D + LE+ AG GG+E+ Sbjct: 71 FQEAGDDVEMREMARSEMKEIEVRLDELETLIKILLLPKDPNDDRNCMLEIRAGTGGSEA 130 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LL +Y ++ ++ ++ G++ G K+ L +KG + Y LK E GVHR+ Sbjct: 131 NIFAGDLLDVYRKFMSAEGWQVSMMDSSPGDDGGYKNVVLEVKGDSVYSKLKWEAGVHRV 190 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ + P D+ ++++I D + T R+ GAGGQ+VN ++AV Sbjct: 191 QRVPATETQGRVHTSTATVAIMPECDE-VDVKIDPKDIEMSTMRSGGAGGQNVNKVETAV 249 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ ++C QERSQ KNK A ML A+LY++E +KRE +IG G Sbjct: 250 DLLHKPTGIRIKCTQERSQLKNKELAMKMLMARLYDIENEKREAEERERRG--VQIGTGG 307 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + V D R + + L GD+ + + + Sbjct: 308 RSEKIRTYNWKD-SRVSDHRLG-QNFPLQNFLSGDVGPIIDGLIIKDQ 353 >gi|15080204|gb|AAH11873.1| Mitochondrial translational release factor 1-like [Homo sapiens] gi|119568097|gb|EAW47712.1| mitochondrial translational release factor 1-like, isoform CRA_a [Homo sapiens] gi|119568101|gb|EAW47716.1| mitochondrial translational release factor 1-like, isoform CRA_a [Homo sapiens] gi|312151704|gb|ADQ32364.1| mitochondrial translational release factor 1-like [synthetic construct] Length = 380 Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats. Identities = 115/305 (37%), Positives = 156/305 (51%), Gaps = 9/305 (2%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L I + E + L + LL E+ E + + I + S Sbjct: 63 ELLAVIKLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A+ Sbjct: 123 ETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASA 182 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G AY +K E GVHR+ R+ + R HTS ++ + P I + I+ D RI Sbjct: 183 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILP-QPTEINLVINPKDLRI 241 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK A LRAKLY + L+ Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLE 301 Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345 EEI + K +I G +IR+Y P V D R N + GD LD+ Sbjct: 302 --EEINKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLLDE 358 Query: 346 FMKAT 350 +++ Sbjct: 359 LVQSL 363 >gi|293977889|ref|YP_003543319.1| bacterial peptide chain release factor 2 [Candidatus Sulcia muelleri DMIN] gi|292667820|gb|ADE35455.1| bacterial peptide chain release factor 2 (bRF-2) [Candidatus Sulcia muelleri DMIN] Length = 345 Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats. Identities = 124/351 (35%), Positives = 207/351 (58%), Gaps = 17/351 (4%) Query: 2 KLSRQLNCLGGLFDWDNA-VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 K+S +L + + + RL E + + + ++ L +++ +++ Sbjct: 9 KISIKLKEIYYYLNIEQKYRSRLEK-----ESHNFCKKIKKSNTLFFKKKQ---ILNYFY 60 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 I+ L + ILLE + + + N I+ +F G+ D+ +A L+ Sbjct: 61 SIKVLLNELKILLEFFPYGEVTELEIDFIYNK--IEKFFSKIEFTKFFFGKEDNLNAVLQ 118 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + AGAGGTES DWA+ML RMY WAEK FK + + G+ G++S T ++KG + +G+ Sbjct: 119 ISAGAGGTESCDWASMLYRMYIMWAEKHNFKIKKINSLQGDIIGLRSITFIVKGLSPFGY 178 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 LKGE GVHRLVRISP+D++ R HTSF+S+++YP++DD I I+I+ SD +T+R+ G+GG Sbjct: 179 LKGENGVHRLVRISPFDNSKR-HTSFASVYIYPLIDDDINIKINTSDISWNTFRSRGSGG 237 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q+VN +S VR+ H PT ++++ + +SQ NK +A +L+++L+ +E + + Sbjct: 238 QNVNKVESGVRLHHHPTNIIIENSETKSQFNNKIKALKLLKSRLFYIE-----KKSKNTT 292 Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 K +I W QIR+Y++ PY++VKDLRT E + VL+G++D F+K L Sbjct: 293 CIKKKIEWSSQIRNYIMHPYKLVKDLRTGYETSDIESVLNGEIDIFLKKNL 343 >gi|329945388|ref|ZP_08293151.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 170 str. F0386] gi|328529010|gb|EGF55941.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 170 str. F0386] Length = 364 Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats. Identities = 111/346 (32%), Positives = 166/346 (47%), Gaps = 12/346 (3%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 + + + + + P + L R L ++ + Q D ELA Sbjct: 9 EPLLAEYADIEAEMAGPAAAD-PGAMRRLGRRYAELGRVVAAYRAWQSASTDLADARELA 67 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 E++D + T + + E + + D+ D +EV AG GG ES +A+ Sbjct: 68 AEDEDFAAEVPTLEAAEAAAGEHLREVL--VPRDPDDARDVIIEVKAGEGGEESALFASD 125 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHR 189 L RMY+R+AE++ + E L+ D + G K L I + LK E GVHR Sbjct: 126 LARMYSRYAERQGWAVEVLDATDSDLGGYKDVRLAIKTRGPVEPQNGVWAHLKYEGGVHR 185 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS + + V P DD E++I +D RID +R+SG GGQ VNTTDSA Sbjct: 186 VQRVPVTESQGRIHTSAAGVLVMPEADDPGELQIDAADLRIDVFRSSGPGGQSVNTTDSA 245 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308 VRITH+PTG+VV Q E+SQ +NK A +LRA+L A S+ + Sbjct: 246 VRITHLPTGIVVSMQNEKSQLQNKEAAMRVLRARLLAERAAAVAAEAAQARRSQVRTVDR 305 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RT + + VLDGDL + + +A+ Sbjct: 306 SERIRTYNF-PENRIADHRTGFKAYNLDAVLDGDLGPVIASAIAMD 350 >gi|332213665|ref|XP_003255945.1| PREDICTED: peptide chain release factor 1-like, mitochondrial isoform 1 [Nomascus leucogenys] Length = 380 Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 155/305 (50%), Gaps = 9/305 (2%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L I + E + L + LL E+ E + + I + S Sbjct: 63 ELLAVIKLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A+ Sbjct: 123 ETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASA 182 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G AY +K E GVHR+ R+ + R HTS ++ + P I + I+ D RI Sbjct: 183 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILP-QPTEINLVINPKDLRI 241 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK A LRAKLY + L+ Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLE 301 Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345 EE + K +I G +IR+Y P V D R N + GD LD+ Sbjct: 302 --EETNKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINRTLHDLETFMQGDYLLDE 358 Query: 346 FMKAT 350 +++ Sbjct: 359 LVQSL 363 >gi|152965225|ref|YP_001361009.1| peptide chain release factor 1 [Kineococcus radiotolerans SRS30216] gi|189039977|sp|A6W7F6|RF1_KINRD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|151359742|gb|ABS02745.1| peptide chain release factor 1 [Kineococcus radiotolerans SRS30216] Length = 355 Score = 179 bits (453), Expect = 6e-43, Method: Composition-based stats. Identities = 107/349 (30%), Positives = 168/349 (48%), Gaps = 11/349 (3%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + + L + DP + + A+ L R L + R + Sbjct: 1 MFEAVTPLLDEHAELERRLADPAVHADAALARTLGRRYAELGAVVVA--HAAWRAAADDA 58 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 L +D + E + + E + L DS D LE+ AG GG ES Sbjct: 59 EAARELAAEDAAFAAELPALQRAAEEAGEKLRRLLLPRDPDDSRDVILEIKAGEGGEESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQG 186 +A LLRMY R+AE+ + TE L+ + + G K ++ +K + LK E G Sbjct: 119 LFAGDLLRMYLRYAERHGWVTEVLDANPSDLGGYKDVSVAVKTRGAAAEGVWHRLKYEGG 178 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ +S R HTS + + +E+ + +D R+D +R+SG GGQ VNTT Sbjct: 179 VHRVQRVPVTESQGRVHTSAV-GVLVVPEAEEVEVAVDPNDLRVDVFRSSGPGGQSVNTT 237 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE- 305 DSAVRITH+PTGVV CQ E+SQ +N+ QA +LRA+L+ L + + A+ S+ Sbjct: 238 DSAVRITHLPTGVVATCQNEKSQLQNREQAMRILRARLHALAQEAADAQASAARRSQVRT 297 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + ++R+Y + D RT + + VLDGDLD +++ + Sbjct: 298 VDRSERVRTYNYG-ENRIADHRTGFKAYNLDTVLDGDLDPVIQSAIDAD 345 >gi|166795303|ref|NP_061914.3| peptide chain release factor 1-like, mitochondrial isoform a [Homo sapiens] gi|74753314|sp|Q9UGC7|RF1ML_HUMAN RecName: Full=Peptide chain release factor 1-like, mitochondrial; AltName: Full=Mitochondrial translational release factor 1-like; AltName: Full=mtRF1a; Flags: Precursor gi|6706658|emb|CAB65994.1| mitochondrial translational release factor 1-like [Homo sapiens] gi|158254756|dbj|BAF83351.1| unnamed protein product [Homo sapiens] Length = 380 Score = 178 bits (452), Expect = 8e-43, Method: Composition-based stats. Identities = 115/305 (37%), Positives = 156/305 (51%), Gaps = 9/305 (2%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L I + E + L + LL E+ E + + I + S Sbjct: 63 ELLAVIKLLNEKERELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A+ Sbjct: 123 ETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASA 182 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G AY +K E GVHR+ R+ + R HTS ++ + P I + I+ D RI Sbjct: 183 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILP-QPTEINLVINPKDLRI 241 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK A LRAKLY + L+ Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLE 301 Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345 EEI + K +I G +IR+Y P V D R N + GD LD+ Sbjct: 302 --EEINKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLLDE 358 Query: 346 FMKAT 350 +++ Sbjct: 359 LVQSL 363 >gi|297679452|ref|XP_002817544.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like isoform 1 [Pongo abelii] Length = 380 Score = 178 bits (452), Expect = 9e-43, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 155/305 (50%), Gaps = 9/305 (2%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L I + E + L + LL E+ E + + I + S Sbjct: 63 ELLAVIKLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A+ Sbjct: 123 ETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRQASA 182 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G AY +K E GVHR+ R+ + R HTS ++ + P I + I+ D RI Sbjct: 183 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILP-QPTEINLVINPKDLRI 241 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK A LRAKLY + L+ Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLE 301 Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345 EE + K +I G +IR+Y P V D R N + GD LD+ Sbjct: 302 --EETNKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKTLHDLETFMRGDYLLDE 358 Query: 346 FMKAT 350 +++ Sbjct: 359 LVQSL 363 >gi|71043904|ref|NP_001020894.1| peptide chain release factor 1-like, mitochondrial precursor [Rattus norvegicus] gi|81907899|sp|Q4V7E5|RF1ML_RAT RecName: Full=Peptide chain release factor 1-like, mitochondrial; AltName: Full=Mitochondrial translational release factor 1-like; Flags: Precursor gi|66910900|gb|AAH97970.1| Mitochondrial translational release factor 1-like [Rattus norvegicus] Length = 373 Score = 178 bits (452), Expect = 9e-43, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 158/305 (51%), Gaps = 9/305 (2%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L A + E + L D LL E+ E + + I + S Sbjct: 56 QLAAAARLLNEKERELRDTESLLHDENEDLKKLAESEIALCQKEIAELKHRIISLLVPSE 115 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 + D +D LEV AG GG E+ + + + MY ++A +++ E LE E G++ A+ Sbjct: 116 DMDGSDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSELGGLRHASA 175 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I GP AY +K E GVHR+ R+ + R HTS ++ + P I++ I+ D RI Sbjct: 176 SIGGPEAYRHMKFEGGVHRVQRVPKTERQGRIHTSTMTVAILP-QPTEIKLVINPKDLRI 234 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT RASGAGGQHVNTTDSAVRI H+PTG++ +CQQERSQ KN+ A LRA+LY + L+ Sbjct: 235 DTKRASGAGGQHVNTTDSAVRIVHLPTGIISECQQERSQLKNRELAMKKLRARLYSMRLE 294 Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345 EE A + K ++ G +IR+Y P V D R N + GD LDD Sbjct: 295 --EETAKRYSARKIQVGTKGRSEKIRTYNF-PQNRVTDHRINKSLHDLESFMQGDCLLDD 351 Query: 346 FMKAT 350 +++ Sbjct: 352 LIQSL 356 >gi|303280341|ref|XP_003059463.1| predicted protein [Micromonas pusilla CCMP1545] gi|226459299|gb|EEH56595.1| predicted protein [Micromonas pusilla CCMP1545] Length = 289 Score = 178 bits (452), Expect = 9e-43, Method: Composition-based stats. Identities = 102/253 (40%), Positives = 150/253 (59%), Gaps = 3/253 (1%) Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 + LL G D+ A + ++AGAGGT++QDW+ ML R Y +WA++R F G+ Sbjct: 32 WEARRLLGGTYDALGATVFIYAGAGGTDAQDWSEMLERCYLQWADRRGFAVRVEARTPGD 91 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 EAG+KS TL I+G AYG+L E+G HRLVR SP++ + SF + Sbjct: 92 EAGLKSVTLEIEGRYAYGYLASEKGTHRLVRTSPFNKGA---FSFIHATRQTSFAAVDVM 148 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 E + T R+ GAGGQ+VN ++AVR+ H+PTG+VV+C++ERSQ N+A+A L+ Sbjct: 149 PTLEDKIEVTTMRSGGAGGQNVNKVETAVRMKHLPTGIVVRCEEERSQAMNRAKAIARLK 208 Query: 282 AKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 AKL + ++R + WG+QIR+YV PY+MVKD+RT +E + V++G Sbjct: 209 AKLAAVAEERRLADVAAVRGDVVKAEWGQQIRNYVFHPYKMVKDVRTGMETSDVEGVMNG 268 Query: 342 DLDDFMKATLAIK 354 LD+F A L + Sbjct: 269 KLDEFQNAWLRWR 281 >gi|218507716|ref|ZP_03505594.1| peptide chain release factor 1 [Rhizobium etli Brasil 5] Length = 282 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 102/260 (39%), Positives = 152/260 (58%), Gaps = 8/260 (3%) Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + + Q L AD A LE+ AG GG+E+ +A L RMY R+A ++ +K E L Sbjct: 14 EALEQEMQILLLPKDAADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAAEKGWKVEVL 73 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 +GE G K I G + LK E GVHR+ R+ ++ R HTS +++ V P Sbjct: 74 SASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLP-E 132 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 + I+IEI D RIDT R+SGAGGQHVNTTDSAVRITH+P+G+VV E+SQH+N+A+ Sbjct: 133 AEEIDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVRITHLPSGIVVTSS-EKSQHQNRAK 191 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEK 332 A +LR++LY+ E Q+ + K+++G G +IR+Y P V D R N+ Sbjct: 192 AMQVLRSRLYDAERQR--ADSERSADRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTL 248 Query: 333 TSPSDVLDGDLDDFMKATLA 352 +++G++++ + A +A Sbjct: 249 YKLDRMMEGEIEEVVDALMA 268 >gi|254455525|ref|ZP_05068954.1| peptide chain release factor 1 [Candidatus Pelagibacter sp. HTCC7211] gi|207082527|gb|EDZ59953.1| peptide chain release factor 1 [Candidatus Pelagibacter sp. HTCC7211] Length = 357 Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats. Identities = 110/344 (31%), Positives = 172/344 (50%), Gaps = 15/344 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + + S L L +E + I K+ D L + Sbjct: 7 IEELILKHSTLEKDLSSRDL--EKKVFAEKSKEYSDISEVIVSAKKYLSYEKDKKELENI 64 Query: 76 ALEEDDCSI-----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + E + + + + L EAD +A +E+ AG GG E+ Sbjct: 65 LNDNSVDEELKKLADTELLELKDEYERNEKKLKLFLLPKDEADKKNAIIEIRAGTGGLEA 124 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A+ L +MY + + K+K+ E + I + G+K IKG N Y LK E GVHR+ Sbjct: 125 SLFASDLFKMYEKVSHKKKWALELISISRSDAGGLKEVIASIKGTNIYSTLKYESGVHRV 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + ++++I+E+D RID +RA G GGQ VNTTDSAV Sbjct: 185 QRVPDTETQGRVHTSAATVAVLP-EAEEVDLKINEADLRIDVFRAGGPGGQSVNTTDSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG+ V Q E+SQHKNKA+ +LR++LYELE + ++ + KT+IG G Sbjct: 244 RITHIPTGLTVSQQDEKSQHKNKAKGMKILRSRLYELERSRIDQERSQ--DRKTKIGTGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350 +IR+Y P V D R N+ + L+G+ D+ +++ Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLHRLEEFLEGEAFDEMIESL 344 >gi|320096082|ref|ZP_08027682.1| peptide chain release factor RF1 [Actinomyces sp. oral taxon 178 str. F0338] gi|319976962|gb|EFW08705.1| peptide chain release factor RF1 [Actinomyces sp. oral taxon 178 str. F0338] Length = 366 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 100/347 (28%), Positives = 153/347 (44%), Gaps = 11/347 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + + + P + + + R L + + D E+ Sbjct: 11 LEPLLAEYAQVEQDMASPATLADPARLRRVGRRYAELGRVKAAADRLAAARDDLGAAREI 70 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A E+ + + E + D+ +A LE+ AG GG ES +A+ Sbjct: 71 AAEDPSFAQEVPALEEEAAAAHEALMRIL--APRDPQDALNAILEIKAGEGGEESALFAS 128 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVH 188 L RMY R+AE + + E G K TL I + LK E GVH Sbjct: 129 DLARMYARYAEAHGWSVTEMSATRTELGGFKDVTLAIRAKGSPAPDEGVWAHLKYEGGVH 188 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS ++ P ++D ++ I +D RID YR+SG GGQ VNTTDS Sbjct: 189 RVQRVPVTESAGRIHTSAVGVFAMPEIEDDEDVVIDPNDLRIDVYRSSGPGGQSVNTTDS 248 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307 AVR+TH+P+G+VV Q E+SQ +NK A +L ++L KRE A+ S+ + Sbjct: 249 AVRVTHLPSGIVVSMQNEKSQLQNKEAALRVLASRLAAEARAKREAEASAQRLSQVRTVD 308 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RT + + VL G LD + + Sbjct: 309 RSERIRTYNF-PENRIADHRTGFKAHNLDQVLGGALDPVIASLREAD 354 >gi|114609863|ref|XP_518818.2| PREDICTED: mitochondrial translational release factor 1-like isoform 6 [Pan troglodytes] Length = 380 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 114/305 (37%), Positives = 155/305 (50%), Gaps = 9/305 (2%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L I + E + L + LL E+ E + + I + S Sbjct: 63 ELLAVIRLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A+ Sbjct: 123 ETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASA 182 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G AY +K E GVHR+ R+ + R HTS ++ + P I + I+ D RI Sbjct: 183 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILP-QPTEINLVINPKDLRI 241 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK A LRAKLY + L+ Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLE 301 Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345 EE + K +I G +IR+Y P V D R N + GD LD+ Sbjct: 302 --EETNKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLLDE 358 Query: 346 FMKAT 350 +++ Sbjct: 359 LVQSL 363 >gi|297828437|ref|XP_002882101.1| hypothetical protein ARALYDRAFT_904175 [Arabidopsis lyrata subsp. lyrata] gi|297327940|gb|EFH58360.1| hypothetical protein ARALYDRAFT_904175 [Arabidopsis lyrata subsp. lyrata] Length = 410 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 116/354 (32%), Positives = 182/354 (51%), Gaps = 17/354 (4%) Query: 9 CLGGLFD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L + D R + L P + E +E + L +++ I +++ + Sbjct: 48 DLIKIMDQRLSAIEHRNALLQKLINQPEY--SPEEFSRANKELRKLRDSMFLINDLRAKQ 105 Query: 67 CDNLILLELALEEDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L L E D + + + ++ K L EAD D LEV Sbjct: 106 KEIDGLKSLVSESSDDKDMLDMAVSELDEAVEEEKRLQTLLLKSLLPKDEADERDCILEV 165 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG GG E+ +A + RMY R+++K+ +K + ++I + + G K A+ I G + YG L Sbjct: 166 RAGTGGEEASLFAMDIFRMYERYSQKKAWKFDIVDITESDMKGYKEASAAICGASVYGKL 225 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HR+ RI + + R HTS S+ + P D +++++ D RIDTYR+ G+GGQ Sbjct: 226 KFESGIHRVQRIPITEKSGRIHTSAISVAILPQ-ADEVDVQLRNEDLRIDTYRSGGSGGQ 284 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H NTT+SAVRI H+PTG++V Q ERSQH N+A+A +L A+LYE+E + + + S Sbjct: 285 HANTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVLCARLYEIERLRIQSSRSKLRS 344 Query: 302 SKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351 +IG G + IR+Y P V D R I + D++ G+ LD F+ A L Sbjct: 345 D--QIGSGDRSGRIRTYNF-PQGRVTDHRVGITLHAIEDMMQGEILDSFIDALL 395 >gi|221124304|ref|XP_002161242.1| PREDICTED: hypothetical protein [Hydra magnipapillata] Length = 281 Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats. Identities = 108/265 (40%), Positives = 147/265 (55%), Gaps = 14/265 (5%) Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 Q L D+ A++E+ AG GG ES +A L RMYTR+ + + +TE + + Sbjct: 7 ELQRMLLPKDPDDARPAFVEIRAGTGGDESALFAVDLARMYTRYCDAKGLRTEIMSASES 66 Query: 161 EEAGIKSATLLIK--------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 E G K L I+ AYG LK E G HR+ R+ ++ R HTS +I V Sbjct: 67 ELGGYKEVVLRIEGSTTTSAGSCGAYGMLKFESGGHRVQRVPATETQGRIHTSACTIAVL 126 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 D++ I+I+ SD RIDTYRASGAGGQH+N TDSAVRITHIPTG+V +CQ RSQH N Sbjct: 127 AEQDEAEAIKINPSDLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVAECQDGRSQHSN 186 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTN 329 KAQA +L A++ E + E A K+ +G G +IR+Y P + D R N Sbjct: 187 KAQALKVLTARI--HEKDRSERAAKDAAERKSLVGSGDRSDRIRTYNY-PQGRLTDHRIN 243 Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354 + ++GDLDD ++A A + Sbjct: 244 LTLYKLDRAMEGDLDDVIEALQAYE 268 >gi|327327350|gb|EGE69126.1| peptide chain release factor 1 [Propionibacterium acnes HL103PA1] Length = 400 Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats. Identities = 108/343 (31%), Positives = 165/343 (48%), Gaps = 8/343 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + L + T+ D + + L + L + +S + D +L Sbjct: 48 IDEVRRCLREIETQLADFAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 107 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D + E ++ L S D DA +E+H+G GG ES +A Sbjct: 108 TE--EDPAFGLEAERLRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 165 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192 LLRMY R+AE+ + L + G ++ + + AYG+LK E GVHR+ R Sbjct: 166 DLLRMYIRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPLRPAYGYLKHEGGVHRVQR 225 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S+ R HTS + V P VD++ I ++ R+D YR+SG GGQ VNTTDSAVR+ Sbjct: 226 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPAEIRVDVYRSSGPGGQGVNTTDSAVRL 284 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311 TH+ TG+VV CQ ERSQ +NKA+A MLRAK+ L Q+ + + + + + Sbjct: 285 THLSTGIVVSCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 344 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +R+Y P + D R + +L GDL D + A A + Sbjct: 345 VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 386 >gi|301786516|ref|XP_002928673.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like [Ailuropoda melanoleuca] Length = 380 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 112/306 (36%), Positives = 157/306 (51%), Gaps = 9/306 (2%) Query: 50 QHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS 109 L A + E + L + LL E+ E + + I + S Sbjct: 62 SELLAAAKLLSEKEQELQETEHLLHDENEDLRKLAENEITSCQKEITQLKHQIILLLVPS 121 Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169 E D+ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A+ Sbjct: 122 EETDANDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSEIGGLRHAS 181 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 I G AY +K E GVHR+ R+ + R HTS ++ V P I + I+ D R Sbjct: 182 ASIGGLEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAVLP-QPTEINLVINPKDLR 240 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 IDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+ A LRAKLY + L Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSMYL 300 Query: 290 QKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LD 344 + EE + + K ++ G +IR+Y P V D R N + G+ LD Sbjct: 301 E--EETSKRYSARKIQVGTKGRSEKIRTYNF-PQNRVTDHRINKSLHDLETFMQGEYLLD 357 Query: 345 DFMKAT 350 + +++ Sbjct: 358 ELVQSL 363 >gi|42569997|ref|NP_182225.3| peptide chain release factor, putative [Arabidopsis thaliana] gi|124301088|gb|ABN04796.1| At2g47020 [Arabidopsis thaliana] gi|330255695|gb|AEC10789.1| Peptide chain release factor 1 [Arabidopsis thaliana] Length = 413 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 116/354 (32%), Positives = 182/354 (51%), Gaps = 17/354 (4%) Query: 9 CLGGLFD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L + D R + L P + E +E + L +++ I +++ + Sbjct: 51 DLIKIMDQRLSAIEHRNAVLQKLINQPEY--SPEEFSRANKELRKLRDSMLLINDLRAKQ 108 Query: 67 CDNLILLELALEEDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L L E D + + + ++ K L EAD D LEV Sbjct: 109 KEIDGLKSLVSESSDDKDMLDLAVGELDEAVEEEKRLQTLLLKSLLPKDEADERDCILEV 168 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AG GG E+ +A + RMY R+++K+ +K + ++I + + G K A+ I G + YG L Sbjct: 169 RAGTGGEEASLFAMDIFRMYERYSQKKGWKFDIVDITESDMKGYKEASAAICGASVYGKL 228 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E G+HR+ RI + + R HTS S+ + P D +++++ D RIDTYR+ G+GGQ Sbjct: 229 KFESGIHRVQRIPITEKSGRIHTSAISVAILPQ-ADEVDVQLRNEDLRIDTYRSGGSGGQ 287 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H NTT+SAVRI H+PTG++V Q ERSQH N+A+A +L A+LYE+E + + + S Sbjct: 288 HANTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVLCARLYEIERLRIQSSRSKLRS 347 Query: 302 SKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351 +IG G + IR+Y P V D R I + D++ G+ LD F+ A L Sbjct: 348 D--QIGSGDRSGRIRTYNF-PQGRVTDHRVGITHHAIEDMMQGENLDMFIDALL 398 >gi|149183883|ref|ZP_01862274.1| peptide chain release factor 1 [Bacillus sp. SG-1] gi|148848402|gb|EDL62661.1| peptide chain release factor 1 [Bacillus sp. SG-1] Length = 253 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 96/248 (38%), Positives = 142/248 (57%), Gaps = 7/248 (2%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 D + +EV AGG E+ +A L RMY+R+AE + +KTE +E + G K Sbjct: 1 PNDDKNVIMEVRGAAGGDEAALFAGDLYRMYSRFAEAQGWKTEVMEANSTGVGGYKEIIF 60 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 +I G AY +K E G HR+ R+ +S R HTS +++ P + +EI+I E D R+ Sbjct: 61 MINGNGAYSKMKYENGAHRVQRVPETESGGRIHTSTATVACLP-EAEEVEIDIHEKDIRV 119 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT+ +SG GGQ VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A +LRA++Y+ Sbjct: 120 DTFASSGPGGQSVNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKF-- 177 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 +RE A + K+ +G G +IR+Y P V D R + +L+G +D+ + Sbjct: 178 QREVQAEYDANRKSAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKMDEVI 236 Query: 348 KATLAIKK 355 A + + Sbjct: 237 DALILEDQ 244 >gi|148243244|ref|YP_001228401.1| peptide chain release factor 1 [Synechococcus sp. RCC307] gi|166223614|sp|A5GVY9|RF1_SYNR3 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|147851554|emb|CAK29048.1| Peptide chain release factor 1 [Synechococcus sp. RCC307] Length = 364 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 99/348 (28%), Positives = 164/348 (47%), Gaps = 13/348 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + + L + DP + + + L +ER L+ + + +Q ++ +L Sbjct: 10 LEATCRTFNALERQLADPSVAADPEQLLTLAKERSRLEPLVLDYQRLQQLHAEHQQAQQL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130 E + L+ + + + + + L S D LE+ AGAGG E+ Sbjct: 70 LKESKGDAELEALAQEELQQLSSEQEQLNQRLKVALLPSDPRDERSVMLEIRAGAGGDEA 129 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 WA L RMY R A+ ++ + + E G K L I+G + LK E GVHR+ Sbjct: 130 CLWAGDLARMYERHAQTCGWQVNPVSASEAELGGFKELILAIRGDAVFSQLKYEAGVHRV 189 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS +++ V P D ++++I D I T R+ GAGGQ+VN ++AV Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADPVDVQIDPKDLDISTARSGGAGGQNVNKVETAV 248 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 + H PTG+ V C QERSQ +N+ +A +LRAK L ++ E A + + ++G G Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERAMEILRAK--LLAKEEEEAAAAESSARRAQVGSGD 306 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y + D R + VL+G L D ++A + Sbjct: 307 RSEKIRTYNYKD-NRTTDHRLG-KNFPLETVLNGQLSDLIEACTHADQ 352 >gi|314981451|gb|EFT25545.1| peptide chain release factor 1 [Propionibacterium acnes HL110PA3] Length = 379 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 108/343 (31%), Positives = 165/343 (48%), Gaps = 8/343 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + L + T+ D + + L + L + +S + D +L Sbjct: 27 IDEVRRCLREIETQLADFAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 86 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D + E ++ L S D DA +E+H+G GG ES +A Sbjct: 87 TE--EDPAFGLEAERLRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 144 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192 LLRMY R+AE+ + L + G ++ + + AYG+LK E GVHR+ R Sbjct: 145 DLLRMYIRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPLRPAYGYLKHEGGVHRVQR 204 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S+ R HTS + V P VD++ I ++ R+D YR+SG GGQ VNTTDSAVR+ Sbjct: 205 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPAEIRVDVYRSSGPGGQGVNTTDSAVRL 263 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311 TH+ TG+VV CQ ERSQ +NKA+A MLRAK+ L Q+ + + + + + Sbjct: 264 THLSTGIVVSCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 323 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +R+Y P + D R + +L GDL D + A A + Sbjct: 324 VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 365 >gi|255548277|ref|XP_002515195.1| peptide chain release factor, putative [Ricinus communis] gi|223545675|gb|EEF47179.1| peptide chain release factor, putative [Ricinus communis] Length = 422 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 113/350 (32%), Positives = 179/350 (51%), Gaps = 18/350 (5%) Query: 19 AVQRLSFLNTKTE-DPHLWQN----VIEAKMLMRERQHLD---NAISFIKEIQDRLCDNL 70 QRLS + ++ + E +E + L IS ++ IQ + Sbjct: 65 MEQRLSAIEHRSAYLENFIDKLEASPAEYSRANKELRKLRRPVELISELRSIQKEIDGLR 124 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGT 128 L+ E+ + N + + + +AD D LEV AG GG Sbjct: 125 SLMAECPEDKHMIDMANEELNQAIEEEKRLQNVLLKSLLPTDDADERDCILEVRAGTGGE 184 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ ++ + RMY R+++K+ +K E ++I + + G K A+ I G +G LK E G+H Sbjct: 185 EASLFSMDIFRMYERYSQKKGWKFEVVDITESDLKGYKEASAAISGAGVFGKLKFESGIH 244 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ + + R HTS S+ + P D +++++ D RIDTYR+ G+GGQH NTT+S Sbjct: 245 RVQRVPVTEKSGRVHTSAVSVAILPQ-ADEVDVQLRNEDLRIDTYRSGGSGGQHANTTNS 303 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+TH+PTG+ V Q ERSQH NKA+A +L AKLYE+E + + + S +IG Sbjct: 304 AVRVTHLPTGMTVSIQDERSQHMNKAKALKVLCAKLYEIERSRIQMSRSKLRSE--QIGS 361 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354 G +IR+Y P V D R I + ++++ G+ LD F+ A L + Sbjct: 362 GDRSERIRTYNF-PQGRVTDHRVGITHHAINNMMQGESLDVFIDALLLQQ 410 >gi|314923482|gb|EFS87313.1| peptide chain release factor 1 [Propionibacterium acnes HL001PA1] gi|315092954|gb|EFT64930.1| peptide chain release factor 1 [Propionibacterium acnes HL060PA1] gi|315103525|gb|EFT75501.1| peptide chain release factor 1 [Propionibacterium acnes HL050PA2] Length = 379 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 108/343 (31%), Positives = 165/343 (48%), Gaps = 8/343 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + L + T+ D + + L + L + +S + D +L Sbjct: 27 IDEVRRCLREIETQLADFAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 86 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D + E ++ L S D DA +E+H+G GG ES +A Sbjct: 87 TE--EDPAFGLEAERLRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 144 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192 LLRMY R+AE+ + L + G ++ + + AYG+LK E GVHR+ R Sbjct: 145 DLLRMYIRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPLRPAYGYLKHEGGVHRVQR 204 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S+ R HTS + V P VD++ I ++ R+D YR+SG GGQ VNTTDSAVR+ Sbjct: 205 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPAEIRVDVYRSSGPGGQGVNTTDSAVRL 263 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311 TH+ TG+VV CQ ERSQ +NKA+A MLRAK+ L Q+ + + + + + Sbjct: 264 THLSTGIVVSCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 323 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +R+Y P + D R + +L GDL D + A A + Sbjct: 324 VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 365 >gi|314966526|gb|EFT10625.1| peptide chain release factor 1 [Propionibacterium acnes HL082PA2] Length = 379 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 108/343 (31%), Positives = 165/343 (48%), Gaps = 8/343 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + L + T+ D + + L + L + +S + D +L Sbjct: 27 IDEVRRCLREIETQLADFAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 86 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D + E ++ L S D DA +E+H+G GG ES +A Sbjct: 87 TE--EDPAFGLEAERLRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 144 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192 LLRMY R+AE+ + L + G ++ + + AYG+LK E GVHR+ R Sbjct: 145 DLLRMYIRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPLRPAYGYLKHEGGVHRVQR 204 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S+ R HTS + V P VD++ I ++ R+D YR+SG GGQ VNTTDSAVR+ Sbjct: 205 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPAEIRVDVYRSSGPGGQGVNTTDSAVRL 263 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311 TH+ TG+VV CQ ERSQ +NKA+A MLRAK+ L Q+ + + + + + Sbjct: 264 THLSTGIVVSCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 323 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +R+Y P + D R + +L GDL D + A A + Sbjct: 324 VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 365 >gi|321310997|ref|YP_004193326.1| peptide chain release factor 1 [Mycoplasma haemofelis str. Langford 1] gi|319802841|emb|CBY93487.1| peptide chain release factor 1 [Mycoplasma haemofelis str. Langford 1] Length = 364 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 110/347 (31%), Positives = 174/347 (50%), Gaps = 16/347 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ LN + E E + +E L+ E + L + LE+ Sbjct: 13 LATIHEKYVQLNKRLEQET---EGKEIIQINKEIAKLEKIAQGFIEYKKELENLDECLEI 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 +E + ++ L+ K + + + + D + +E+ + AGG ES Sbjct: 70 IKKESNPEFVKLAQSELEAGKRRIPELENSLKRLLIPTDPMDEKNVIVEMRSAAGGDEST 129 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + L Y R+A+ +K L I + G+ + G N + +K E GVHR+ Sbjct: 130 IFVENLFDTYKRYADMNNWKLTILNIQENSI-GMHFLAFSLSGKNVFSKMKFESGVHRVQ 188 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS ++ V P D IEI I SD RID YRASGAGGQHVN T+S+VR Sbjct: 189 RVPATESKGRVHTSTITVSVMP-EQDDIEINIDPSDLRIDVYRASGAGGQHVNKTESSVR 247 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITH+PTG+VV CQQE+SQ +N+A A MLR+KL+E E +K+ + I E+ + +IG G Sbjct: 248 ITHLPTGIVVACQQEKSQIQNRAFAMKMLRSKLWEHEQEKQSKE--IAETVRKQIGRGFR 305 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIK 354 +IR+Y P + D R ++ ++++ GDL + ++ L + Sbjct: 306 CEKIRTYNY-PQNRITDHRVSLTLNKLNEIMIGGDLTEIHESLLNQQ 351 >gi|281345517|gb|EFB21101.1| hypothetical protein PANDA_018665 [Ailuropoda melanoleuca] Length = 379 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 112/306 (36%), Positives = 157/306 (51%), Gaps = 9/306 (2%) Query: 50 QHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS 109 L A + E + L + LL E+ E + + I + S Sbjct: 62 SELLAAAKLLSEKEQELQETEHLLHDENEDLRKLAENEITSCQKEITQLKHQIILLLVPS 121 Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169 E D+ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A+ Sbjct: 122 EETDANDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSEIGGLRHAS 181 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 I G AY +K E GVHR+ R+ + R HTS ++ V P I + I+ D R Sbjct: 182 ASIGGLEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAVLP-QPTEINLVINPKDLR 240 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 IDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+ A LRAKLY + L Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSMYL 300 Query: 290 QKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LD 344 + EE + + K ++ G +IR+Y P V D R N + G+ LD Sbjct: 301 E--EETSKRYSARKIQVGTKGRSEKIRTYNF-PQNRVTDHRINKSLHDLETFMQGEYLLD 357 Query: 345 DFMKAT 350 + +++ Sbjct: 358 ELVQSL 363 >gi|197294284|ref|YP_001798825.1| Protein chain release factor A [Candidatus Phytoplasma australiense] gi|226739118|sp|B1V950|RF1_PHYAS RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|171853611|emb|CAM11482.1| Protein chain release factor A [Candidatus Phytoplasma australiense] Length = 354 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 101/349 (28%), Positives = 167/349 (47%), Gaps = 16/349 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN----LI 71 Q+ L N I + + L+ + ++ Sbjct: 5 LKKIQQKYQNLQQDLLQNQSISNKIN---IFKNLSKLEPIVELFQQYLTLEEQLTNITKA 61 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGTE 129 L + +E+ + L + + +V + Q L D + LE+ GG E Sbjct: 62 LNQDQIEDKEILELAQKEKETLSQQKKVLWNQLRILLLPQDPEDQKNVILEIKGAVGGNE 121 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A LLR Y ++AE +K+K E L +H + G+ S LLI G N Y +LK E GVHR Sbjct: 122 ANLFAADLLRTYMKYAESKKWKVEILNLHPSIKGGLSSVELLISGQNIYSFLKYESGVHR 181 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ + R HTS + + V P +EI+I +D R DT+ +SG GGQ VNTT SA Sbjct: 182 VQRVPATEVQGRIHTSTAIVLVLP-EAKEVEIKIDWNDIRTDTFNSSGPGGQSVNTTKSA 240 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VR++H+P+G+ V CQ+ +SQH+NK +A+ +L+A++Y L ++E N K+ +G G Sbjct: 241 VRLSHLPSGISVACQEGKSQHENKEKAFTLLKARIYNQILNAKQEAENKH--RKSLVGTG 298 Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P + D R + +++G LD ++ + + Sbjct: 299 DRSEKIRTYNY-PQNRITDHRIGLTLQKLDIIMEGKLDFIIEPLIDATQ 346 >gi|330840796|ref|XP_003292395.1| hypothetical protein DICPUDRAFT_40482 [Dictyostelium purpureum] gi|325077351|gb|EGC31069.1| hypothetical protein DICPUDRAFT_40482 [Dictyostelium purpureum] Length = 330 Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 123/333 (36%), Positives = 187/333 (56%), Gaps = 10/333 (3%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 + ++E L I + + D ++E++ +E D +L Sbjct: 4 EELLSSNNNID-----IKDIKEYNSLKAVIDEFNSLNNSFKDYQEIVEMSKKEGDQEMLN 58 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 E+ + L + + L+ GE D N ++EVHAG GG +S DW ++ +MY WAE Sbjct: 59 ESRNLLNSLYSICTDLEINVLMIGEEDDNSCFIEVHAGVGGADSMDWTEIIHKMYINWAE 118 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206 ++ F+ +E GE G++ ATL I G NAYGWL+ E G+H+L+RISP+ + +RHTSF Sbjct: 119 RKGFQVSIIESIPGEF-GLRRATLKIDGKNAYGWLRTEMGIHKLIRISPFSPDFKRHTSF 177 Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +S+ VYP D+SI +++ +D +I+ R+SGAGGQHVNTT+SAVRI HIPT + V C E Sbjct: 178 ASVVVYPSSDNSINVDLKPNDLKIEFTRSSGAGGQHVNTTESAVRIVHIPTNISVFCSSE 237 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG--WGRQIRSYVLQPYQMVK 324 RSQH+NKA ++L+ K++ L + E G G +RSY + P + VK Sbjct: 238 RSQHQNKAIGLDLLKTKIFRHYLSIKNEKEKKFRDELGTNGFASGNIVRSYTMHPQERVK 297 Query: 325 DLRTNIEKTSPSDVLDGD--LDDFMKATLAIKK 355 D RT E + S +L+GD LD +K L++ + Sbjct: 298 DQRTGFETSQLSKILEGDEELDKMIKLALSVSQ 330 >gi|296128915|ref|YP_003636165.1| peptide chain release factor 1 [Cellulomonas flavigena DSM 20109] gi|296020730|gb|ADG73966.1| peptide chain release factor 1 [Cellulomonas flavigena DSM 20109] Length = 392 Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 108/342 (31%), Positives = 169/342 (49%), Gaps = 11/342 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + + + DP + + A+ L R L + ++ + D EL Sbjct: 36 VEAMLAEHAQIERDLADPAVHADAARARRLGRRYAELGRVVQAYRQWRAAADDAQAAAEL 95 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 A E+ + E ++ + D D LE+ AG GG ES +A Sbjct: 96 AAEDASFATEVPALQAAADEAAERLHRVL--VPRDPDDGRDVILEIKAGEGGEESALFAG 153 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVH 188 LLRMYTR+AE++ + + L+ + + G+K A + + + LK E GVH Sbjct: 154 DLLRMYTRYAERQGWSVQVLDATESDLGGVKDAQVAVKARAAGPPEDGVWAHLKYEGGVH 213 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ +S R HTS + + V+P DD +++I ++D RID YR+SG GGQ VNTTDS Sbjct: 214 RVQRVPVTESQGRIHTSAAGVMVFPEADDDGDVDIDQNDLRIDVYRSSGPGGQSVNTTDS 273 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307 AVRITH+PTG+VV Q E+SQ +N+ QA +LRA+L ++ A+ S+ + Sbjct: 274 AVRITHVPTGIVVSMQNEKSQLQNREQAMRVLRARLLAARQEEAAAAASEARRSQVRTVD 333 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +IR+Y P + D RT + + VLDGDL + + Sbjct: 334 RSERIRTYNF-PENRIADHRTGYKAYNLDQVLDGDLGPVIAS 374 >gi|282853790|ref|ZP_06263127.1| peptide chain release factor 1 [Propionibacterium acnes J139] gi|282583243|gb|EFB88623.1| peptide chain release factor 1 [Propionibacterium acnes J139] Length = 361 Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 108/343 (31%), Positives = 165/343 (48%), Gaps = 8/343 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + L + T+ D + + L + L + +S + D +L Sbjct: 9 IDEVRRCLREIETQLADFAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D + E ++ L S D DA +E+H+G GG ES +A Sbjct: 69 TE--EDPAFGLEAERLRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 126 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192 LLRMY R+AE+ + L + G ++ + + AYG+LK E GVHR+ R Sbjct: 127 DLLRMYIRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPLRPAYGYLKHEGGVHRVQR 186 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S+ R HTS + V P VD++ I ++ R+D YR+SG GGQ VNTTDSAVR+ Sbjct: 187 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPAEIRVDVYRSSGPGGQGVNTTDSAVRL 245 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311 TH+ TG+VV CQ ERSQ +NKA+A MLRAK+ L Q+ + + + + + Sbjct: 246 THLSTGIVVSCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 305 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +R+Y P + D R + +L GDL D + A A + Sbjct: 306 VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 347 >gi|40062805|gb|AAR37689.1| peptide chain release factor 1 [uncultured marine bacterium 440] Length = 359 Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 107/332 (32%), Positives = 172/332 (51%), Gaps = 14/332 (4%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 V L + ++ + + +E + I+ K + + L ++ + Sbjct: 10 IVDTYKTLEIQLASGNI--SKKDFVKKSKEYSSIGEVINQAKGYLSFEKEKIELEKIIED 67 Query: 79 EDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 ++ + + + ++ K + + L AD+ +A LE+ AG GG E+ + Sbjct: 68 KESDEEMVQLAKKELNELLEKNKTHEKILRIYLLPKDGADAKNAILEIRAGTGGDEAGLF 127 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 L +MY + K+ E + I G K LLIKG N Y +LK E+GVHR+ R+ Sbjct: 128 VADLYKMYEKVCLNNKWSFEIISISKSGAGGFKEVILLIKGNNIYSFLKYERGVHRVQRV 187 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 ++ R HTS +++ V P + ++I+I E D RID YR++G+GGQ VNTTDSAVRIT Sbjct: 188 PKTETQGRVHTSAATVAVLP-EAEEVDIKIQEKDLRIDVYRSTGSGGQSVNTTDSAVRIT 246 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 HIPTG+VV Q E+SQHKN+A+ +LR+++YE E +K+++ + K +IG G Sbjct: 247 HIPTGIVVTNQDEKSQHKNRAKGMKILRSRVYEAEREKKDKER--SKDRKNQIGSGDRSE 304 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 +IR+Y P V D R N+ + L GD Sbjct: 305 RIRTYNF-PQGRVTDHRINVTLHKLKEFLSGD 335 >gi|311243768|ref|XP_003121185.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like [Sus scrofa] Length = 380 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 112/305 (36%), Positives = 155/305 (50%), Gaps = 9/305 (2%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L + E + L + LL E+ E + I + S Sbjct: 63 ELVAVAKLLTEKERELLETEHLLHDESEDLRKLAENEIISCQKEIAQLKHQIVLLLVPSE 122 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 EAD ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A+ Sbjct: 123 EADENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFEILEYFPSEIGGLRHASA 182 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G AY +K E GVHR+ R+ + R HTS ++ + P I + I+ D RI Sbjct: 183 SIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILP-QPTEINLVINPKDLRI 241 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+ A LRAKLY L L+ Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSLHLE 301 Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345 EE + + K ++ G +IR+Y P V D R N + G+ LD+ Sbjct: 302 --EETSKRYNARKVQVGTKGRSEKIRTYNF-PQNRVTDHRINKSLYDLGTFMQGEYLLDE 358 Query: 346 FMKAT 350 +++ Sbjct: 359 LVQSL 363 >gi|315092115|gb|EFT64091.1| peptide chain release factor 1 [Propionibacterium acnes HL110PA4] Length = 379 Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats. Identities = 107/343 (31%), Positives = 164/343 (47%), Gaps = 8/343 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + L + T+ D + + L + L + +S + D +L Sbjct: 27 IDEVRRCLREIETQLADFAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 86 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D + E ++ L S D DA +E+H+G GG ES +A Sbjct: 87 TE--EDPAFGLEAERLRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 144 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192 LLRMY R+AE+ + L + G ++ + + AYG+LK E GVHR+ R Sbjct: 145 DLLRMYIRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPLRPAYGYLKHEGGVHRVQR 204 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S+ R HTS + V P VD++ I ++ R+D YR+SG GGQ VNTTDSAVR+ Sbjct: 205 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPAEIRVDVYRSSGPGGQGVNTTDSAVRL 263 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311 TH+ TG+VV CQ ERSQ +NKA+A MLRAK+ L Q+ + + + + + Sbjct: 264 THLSTGIVVSCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 323 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +R+Y + D R + +L GDL D + A A + Sbjct: 324 VRTYNFS-QNRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 365 >gi|114052078|ref|NP_001039843.1| peptide chain release factor 1-like, mitochondrial precursor [Bos taurus] gi|122135943|sp|Q2KI15|RF1ML_BOVIN RecName: Full=Peptide chain release factor 1-like, mitochondrial; AltName: Full=Mitochondrial translational release factor 1-like; Flags: Precursor gi|86826548|gb|AAI12807.1| Mitochondrial translational release factor 1-like [Bos taurus] Length = 380 Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 156/305 (51%), Gaps = 9/305 (2%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L + + + L + LL E+ E + + I + S Sbjct: 63 ELVAVAKLLSDKEQELQETQHLLHDENEDLRKLAENEITSCEKEIAQLKHQIILLLVPSE 122 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A+ Sbjct: 123 ETDKNDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSEIGGLRHASA 182 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G AY +K E GVHR+ R+ + R HTS ++ + P I + I+ D RI Sbjct: 183 SIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILP-QPTEINLVINPKDLRI 241 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT RASGAGGQHVNTTDSAVRI H+PTG+V +CQQERSQ KNK A LRAKLY L+L+ Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTGIVSECQQERSQLKNKEMAMKKLRAKLYSLQLE 301 Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345 EE + + K +I G +IR+Y P V D R N + G+ LD+ Sbjct: 302 --EETSKRYNARKIQIGTKGRSEKIRTYNF-PQNRVTDHRINKSLHDLETFMQGEYLLDE 358 Query: 346 FMKAT 350 +++ Sbjct: 359 LVQSL 363 >gi|296483896|gb|DAA26011.1| peptide chain release factor 1-like, mitochondrial precursor [Bos taurus] Length = 380 Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats. Identities = 111/305 (36%), Positives = 156/305 (51%), Gaps = 9/305 (2%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L + + + L + LL E+ E + + I + S Sbjct: 63 ELVAVAKLLSDKEQELQETQHLLHDENEDLRKLAENEITSCEKEIAQLKHQIILLLVPSE 122 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A+ Sbjct: 123 ETDKNDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSEIGGLRHASA 182 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G AY +K E GVHR+ R+ + R HTS ++ + P I + I+ D RI Sbjct: 183 SIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILP-QPTEINLVINPKDLRI 241 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT RASGAGGQHVNTTDSAVRI H+PTG+V +CQQERSQ KNK A LRAKLY L+L+ Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTGIVSECQQERSQLKNKEMAMKKLRAKLYSLQLE 301 Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345 EE + + K +I G +IR+Y P V D R N + G+ LD+ Sbjct: 302 --EETSKRYNARKIQIGTKGRSEKIRTYNF-PQNRVTDHRINKSLHDLETFMQGEYLLDE 358 Query: 346 FMKAT 350 +++ Sbjct: 359 LVQSL 363 >gi|325283363|ref|YP_004255904.1| Peptide chain release factor 1 [Deinococcus proteolyticus MRP] gi|324315172|gb|ADY26287.1| Peptide chain release factor 1 [Deinococcus proteolyticus MRP] Length = 377 Score = 176 bits (445), Expect = 6e-42, Method: Composition-based stats. Identities = 107/352 (30%), Positives = 165/352 (46%), Gaps = 18/352 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNV-IEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLI 71 V + DP + E L R + L ++ +E + D+ Sbjct: 6 LSELVSEFGMVERALGDPAVLAEGGREYTRLTRRHRELSPLVTLYREYETLGQEQQDSRE 65 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 LL + E + L + D NDA LE+ +GAGG E+ Sbjct: 66 LLADPELREMAQAELERISARLA--EVESELEVLLLPTDPLDPNDAVLEIRSGAGGAEAA 123 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLRMY+R+AE + E L+ ++ + G + G AY LK E GVHR+ Sbjct: 124 LFAADLLRMYSRYAESAGLRLEVLDSNESDLGGFAKVVAEVTGEFAYRTLKWESGVHRVQ 183 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS ++ V P V+ S + S+ RID +R+ GAGGQ VNTTDSAVR Sbjct: 184 RVPATESQGRIHTSTVTVAVLPQVEQSEVQ-LDLSEVRIDVFRSQGAGGQSVNTTDSAVR 242 Query: 252 ITHI---PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 T+ P ++V CQ RSQ KN+ +A +L ++L E E +K++ A+ E+ ++IG Sbjct: 243 ATYRAGTPDEIMVVCQDGRSQIKNREKALMILASRLAEREREKQQ--ASEREARSSQIGS 300 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTS--PSDVLDGDLDDFMKATLAIKK 355 G ++R+Y P V D R E + V+ G L++ + A ++ Sbjct: 301 GDRSEKVRTYNY-PQNRVTDHRLEGETKNFPLETVIGGRLEELVGALARQQR 351 >gi|148260023|ref|YP_001234150.1| peptide chain release factor 1 [Acidiphilium cryptum JF-5] gi|166223523|sp|A5FX99|RF1_ACICJ RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|146401704|gb|ABQ30231.1| bacterial peptide chain release factor 1 (bRF-1) [Acidiphilium cryptum JF-5] Length = 352 Score = 176 bits (445), Expect = 6e-42, Method: Composition-based stats. Identities = 107/344 (31%), Positives = 164/344 (47%), Gaps = 11/344 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D V R L + RE ++ I ++ Sbjct: 7 LDRIVLRAEELRAMLAAG---VDGERFVAASRELAEIEPVEQQILLLRAAERARDEAEAA 63 Query: 76 ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + D+L+ + L AD A LE+ AGG E+ +A Sbjct: 64 RADPELRELADAELDSLRETLPRLEHEIRLALLPRDAADERPAILEIRPAAGGDEAALFA 123 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L Y R+A+ R ++ E L+ + E G++ I G + LK E GVHR+ R+ Sbjct: 124 AELFAAYRRYADLRGWRFEILDYTETELGGLREGIAEITGRAVFARLKFESGVHRVQRVP 183 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS ++ V P + +++E++E+D RID +RASGAGGQHVN T+SAVRITH Sbjct: 184 ATETQGRIHTSTVTVAVLP-EAEDVDVEVNEADLRIDVFRASGAGGQHVNKTESAVRITH 242 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +PTG+VV Q+ERSQHKN+A+A +LRA+LY E + A K+++G G + Sbjct: 243 LPTGIVVAMQEERSQHKNRAKAMKILRARLY--EQTRAAAAAGRAADRKSQVGTGDRSER 300 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R N+ V+ G+ D+ + A + Sbjct: 301 IRTYNF-PQGRVTDHRINLTLHKIDRVMLGEFDEIIDALTEEDQ 343 >gi|281208935|gb|EFA83110.1| peptide chain release factor 1 [Polysphondylium pallidum PN500] Length = 463 Score = 176 bits (445), Expect = 6e-42, Method: Composition-based stats. Identities = 100/341 (29%), Positives = 181/341 (53%), Gaps = 14/341 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L + E L + + K + Q ++ ++ ++ + + + L + Sbjct: 110 LKMMSNKYTTLKSLMESQTL--SQEDIKRTSNDAQQIEESVQLFRQYVNEIGNIKELKMM 167 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131 E + + + ++L+ + ++ + + + + D +A +E+ AG GG E+Q Sbjct: 168 LDMEKEEASREMIIEDLKAMGEQLAALEKSLIYSLLPADKDDDGNAIIEIRAGTGGGEAQ 227 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A+ + RMY +A + ++ E+L+I + G + A+ I G +G+LK E GVHR+ Sbjct: 228 LFAHEMFRMYEGYAATKGWRFESLDISYTDVGGCREASAAISGKGVFGFLKNESGVHRVQ 287 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI ++ R HTS +++ + P ++I+I++ D +ID +R+SG GGQ VNTTDSAVR Sbjct: 288 RIPDTETQGRIHTSTTTVAIMP-EPKEVDIKINDRDLKIDVFRSSGNGGQSVNTTDSAVR 346 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---W 308 I H+PTG+ V Q ERSQ +NK++A +LRA+LYE+E + + ++IG Sbjct: 347 IVHLPTGITVSMQDERSQLQNKSKAMKVLRARLYEMERVRLQTER--SAERNSQIGGATR 404 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMK 348 +IR+Y P V D R NI ++ G+ L DF++ Sbjct: 405 SERIRTYNF-PQDRVTDHRVNITTNDIDAIMTGETLGDFIE 444 >gi|149744102|ref|XP_001501636.1| PREDICTED: similar to Mitochondrial translational release factor 1-like [Equus caballus] Length = 380 Score = 176 bits (445), Expect = 6e-42, Method: Composition-based stats. Identities = 110/305 (36%), Positives = 155/305 (50%), Gaps = 9/305 (2%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L + E + L + LL E+ E + + I + S Sbjct: 63 ELVAVARLLSEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E + ND LEV AG GG E+ + + + MY R+A +++ E LE E G++ A+ Sbjct: 123 ETNENDLILEVTAGVGGQEAMLFTSEIFDMYQRYAAFKRWHFETLEYFPSEIGGLRHASA 182 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G AY +K E GVHR+ R+ + R HTS ++ + P I + I+ D RI Sbjct: 183 SIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILP-QPTEINLVINPKDLRI 241 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+ A LRAKLY + ++ Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSMHVE 301 Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345 EE + + K +I G +IR+Y P V D R N + G+ LD+ Sbjct: 302 --EETSKRYNARKVQIGTKGRSEKIRTYNF-PQNRVTDHRINKSLHDLETFMQGENLLDE 358 Query: 346 FMKAT 350 +++ Sbjct: 359 LVQSL 363 >gi|7573420|emb|CAB87736.1| translation releasing factor RF-1-like protein [Arabidopsis thaliana] Length = 419 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 98/355 (27%), Positives = 174/355 (49%), Gaps = 19/355 (5%) Query: 9 CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 + + ++ + L+ K DP + N E + L + LD ++ + +D Sbjct: 57 LIRKM---ESVEKTWKELSVKLADPDVVSNQSEYQKLAQSMSELDEVVTVFRRFKDCEKQ 113 Query: 69 NLILLELALEEDDCSILQETS-----DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L LA E D + E + I+ + + L S D+ + LEV A Sbjct: 114 LLESKVLAKEAGDDEDMAEMIGSEINSLTKEIEELEKQLKVLLLPSDPLDARNILLEVRA 173 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G GG E+ W L+ ++ + G K+ + IKG Y LK Sbjct: 174 GTGGDEAAIWTGDLVGADVSEVQRAQLLEVFNGFMLR---GYKTCVMEIKGNRVYSKLKY 230 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHR+ R+ ++ R HTS +++ + P D +E+ I D + + R+ GAGGQ+V Sbjct: 231 ESGVHRVQRVPQTETQGRVHTSTATVAIMP-EADEVEVVIDPKDIELTSARSGGAGGQNV 289 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 N ++A+ + H P+G+ + C +ER+Q +NKA+A+ +LRAKLYE+++++++E I K Sbjct: 290 NKVETAIDLFHKPSGIRIFCTEERTQIRNKARAFQLLRAKLYEIKVREQQE--KIRNERK 347 Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +++G G +IR+Y + V D R + + + LDG L+D ++A A+++ Sbjct: 348 SQVGTGARSEKIRTYNYKD-SRVTDHRLKM-NFALTTFLDGALEDAVQACAALEQ 400 >gi|54288338|gb|AAV31626.1| predicted protein chain release factor A [uncultured alpha proteobacterium EBAC2C11] Length = 335 Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats. Identities = 109/307 (35%), Positives = 158/307 (51%), Gaps = 13/307 (4%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 N A+ L RE L I+ ++ + L + E + + + E + Sbjct: 27 MANSELAQ-LARELSELRPICDQIELVRRIEAELADALLMVEEAGEDADMLEMVQAEAGL 85 Query: 96 KLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 Q L + D+ +A LEV AG GG E+ +A+ L MY R+A K + Sbjct: 86 LKTRLPEAHSALQIMLLPKDKDDARNAILEVRAGTGGDEAALFASNLFSMYQRFAAKHGW 145 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 E +E+ + G K AT I G + + LK E GVHR+ R+ ++ R HTS +++ Sbjct: 146 NFEVMEVSETGIGGYKEATATISGNDVFARLKFESGVHRVQRVPETEAGGRIHTSAATVA 205 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P + ++I I ESD R+D +RASG GGQ VNTTDSAVRITH+PTG+VV Q E+SQH Sbjct: 206 VLP-EAEDVDIRIDESDLRVDVFRASGPGGQSVNTTDSAVRITHLPTGIVVSQQDEKSQH 264 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLR 327 KN+A+A +LRA++Y+ E + E A K ++G G +IR+Y P V D R Sbjct: 265 KNRAKAMKILRARIYDAERARVE--AQRAAERKGQVGSGDRSERIRTYNF-PQGRVTDHR 321 Query: 328 TNIEKTS 334 N Sbjct: 322 INFTLYK 328 >gi|325186400|emb|CCA20906.1| peptide chain release factor 1 putative [Albugo laibachii Nc14] Length = 397 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 114/348 (32%), Positives = 174/348 (50%), Gaps = 17/348 (4%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 ++R L+ + P + K L E L ++ I+++Q L L E+ Sbjct: 43 LLERHKSLSEQLYSPQGKMSSFVLKNLSIELAELTPKVTTIQKLQSTLQTIDELSEILAS 102 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQ-------FESLLSGEADSNDAYLEVHAGAGGTESQ 131 + + + ++ E + L AD + LE+ AG GG E+ Sbjct: 103 PSSQNDKELIQLAKEELQEAKEDAIALEKSLTRQLLPRDPADDKNCILEIRAGTGGEEAC 162 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +AN LL++Y + A R + + L I + G K I+G YG K E GVHR+ Sbjct: 163 LFANDLLKLYQKIAIMRNWHFQILSISHTDLGGCKECVCTIQGRGVYGQTKFESGVHRVQ 222 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ D R HTS S+ V P + IE+E++ + RID YRASG+GGQHVNTT+SAVR Sbjct: 223 RVPINDV--RVHTSAVSVVVLP-EIEEIEMELNPKELRIDVYRASGSGGQHVNTTESAVR 279 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309 ITHIPTG+ Q ERSQH+NKA+A ++LRA++Y+ +R+ + + +IG G Sbjct: 280 ITHIPTGIQAAVQDERSQHQNKAKAMSILRARVYDQMRDQRD--SKRHQLRSLQIGSGDR 337 Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLAIKK 355 +IR+Y P V D R N+ L+G+L D + A + ++ Sbjct: 338 SERIRTYNF-PQSRVSDHRVNVTLYGIERFLNGELMDPLVDALVLDEQ 384 >gi|32491189|ref|NP_871443.1| hypothetical protein WGLp440 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166396|dbj|BAC24586.1| prfB [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 278 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 139/274 (50%), Positives = 191/274 (69%), Gaps = 1/274 (0%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 ++LEE+D L E ++ + + ++ + + D + Y+++ G+GG ++QDWA Sbjct: 1 MSLEENDSKSLLEVNNEIILLNKRMKKIELMCYFFEKNDRCNCYMDIQPGSGGIDAQDWA 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 ++LLRMY +WA++ FKT+ + E AGIKSAT+ G AYGWLK E G+HRLVR S Sbjct: 61 SILLRMYLKWADRNNFKTDIIYKSSSEIAGIKSATVKFLGSYAYGWLKKETGIHRLVRKS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+DSN +RHTSF SI+VYP ++D IEI+I+ SD RID YR+SGAGGQHVN T+SAVRITH Sbjct: 121 PFDSNGKRHTSFCSIFVYPDINDKIEIKINLSDLRIDVYRSSGAGGQHVNRTESAVRITH 180 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 +PT + QCQ +RSQHKNK +A N L++KLYE EL+K+ + I E SK++I WG QIRS Sbjct: 181 LPTKITTQCQSDRSQHKNKEKAINQLKSKLYEFELRKKNKDKKIIEKSKSKIAWGNQIRS 240 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 Y+ +VKDLRT IE +LDGDL+ F+ Sbjct: 241 YIFD-NSIVKDLRTGIESKKIQSILDGDLNIFLN 273 >gi|291397162|ref|XP_002714988.1| PREDICTED: mitochondrial translational release factor 1-like [Oryctolagus cuniculus] Length = 380 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 109/305 (35%), Positives = 156/305 (51%), Gaps = 9/305 (2%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L A + E + L + LL E+ E + + I + + S Sbjct: 63 ELVAAAKLLSEKEQELRETEHLLRDENEDLRRLAENEITLCQKEITQLKQQIVLLLVPSE 122 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A+ Sbjct: 123 ETDENDLVLEVTAGIGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSEIGGLRHASA 182 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G AY +K E GVHR+ R+ + R HTS ++ + P I + ++ D RI Sbjct: 183 SIGGSEAYKLMKFEGGVHRVQRVPKTERQGRIHTSTMTVAILP-QPTEINLVVNPKDLRI 241 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT RASGAGGQHVNTTDSAVRI H+PTG+V +CQQERSQ KN+ A L AKLY + L+ Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTGIVSECQQERSQLKNREMAMKKLCAKLYSMHLE 301 Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345 EE + + K ++ G +IR+Y P V D R N + GD LD+ Sbjct: 302 --EETSKRYNARKIQVGTKGRSEKIRTYNF-PQNRVTDHRINKSVHDLEAFMKGDYQLDE 358 Query: 346 FMKAT 350 +++ Sbjct: 359 MIQSL 363 >gi|147818957|emb|CAN67129.1| hypothetical protein VITISV_040170 [Vitis vinifera] Length = 1542 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 115/368 (31%), Positives = 174/368 (47%), Gaps = 50/368 (13%) Query: 2 KLSRQL-NCLGGLFDWDNAVQRLSFLNTKTE-DPHLWQNVI----EAKMLMRERQHLDNA 55 +L QL L G+ + QRLS + ++ E +E + L ++ Sbjct: 1198 ELQPQLSTDLIGIME-----QRLSAIEHRSAYLQDFINRPEASPVEYARANKELRKLRSS 1252 Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSG 110 I I E++++ + L L E + + + K L Sbjct: 1253 IEHITELRNKQKEIDGLKSLMAECSEDKDMLNMAAEELGQAAGEEKRLQNLLLKSLLPKD 1312 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 EAD D LEV AG GG E+ +A + +MY ++++K +K E ++I + + G K A+ Sbjct: 1313 EADERDCILEVRAGTGGEEASLFAMDIFKMYEKYSQKNGWKFEVVDITESDLKGYKEASG 1372 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G YG LK E G+HR+ +++++ D RI Sbjct: 1373 AISGSGVYGKLKFESGIHRVQ---------------------------VDVQLRNEDLRI 1405 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DTYR+ G+GGQH NTT+SAVRITHIP+G+ V Q ERSQH NKA+A +L AKLYE+E Sbjct: 1406 DTYRSGGSGGQHANTTNSAVRITHIPSGMTVAIQDERSQHMNKAKALKVLCAKLYEIERS 1465 Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDF 346 + ++ + +IG G +IR+Y P V D R I S +DV+ G+ LD F Sbjct: 1466 RIQKDRSKLRME--QIGSGDRSERIRTYNF-PQGRVTDHRVGITHHSVNDVMQGENLDVF 1522 Query: 347 MKATLAIK 354 + A L + Sbjct: 1523 IDALLLQQ 1530 >gi|301094068|ref|XP_002997878.1| peptide chain release factor 1 [Phytophthora infestans T30-4] gi|262109801|gb|EEY67853.1| peptide chain release factor 1 [Phytophthora infestans T30-4] Length = 366 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 117/355 (32%), Positives = 181/355 (50%), Gaps = 24/355 (6%) Query: 17 DNAVQRLSFLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 D +R L + D + + L E L+ + ++E+Q + L E Sbjct: 10 DLLGRRYDELAHELSHNDGSFSSD--KITNLSIEMAELEPKVIAVRELQSQEKAVEELDE 67 Query: 75 LALEED----------DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 + E+ +E + L+ I L EAD + LE+ AG Sbjct: 68 MINEQADSDEPDALELRHMAEEERRELLEAIINLEGEVVRLMLPRDEADDKSSILEIRAG 127 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 +GG E+ +A +L+MY + A + +K E + I + + G+K + G AYG +K E Sbjct: 128 SGGDEACLFAGDILKMYQKVALAKGWKFELMSISETDLGGVKECVCSLTGRGAYGRMKFE 187 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ D R HTS S+ V P + +E+EI D RID YRASGAGGQHVN Sbjct: 188 SGVHRVQRVPVNDV--RVHTSAVSVVVLP-EAEEVEVEIDPKDLRIDVYRASGAGGQHVN 244 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TT+SAVRITHIPTG+V Q ERSQH+NKA+A +LRA++++ +KR+ + + Sbjct: 245 TTESAVRITHIPTGIVAAVQDERSQHQNKAKALKILRARVFDGIRRKRDAERQTMRN--S 302 Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355 ++G G ++R+Y P V D R N+ +L+G+ LD+ + A + ++ Sbjct: 303 QVGSGDRSERVRTYNF-PQSRVSDHRVNVTVFGIERMLNGELLDEIVDALVVDEQ 356 >gi|302847640|ref|XP_002955354.1| hypothetical protein VOLCADRAFT_106758 [Volvox carteri f. nagariensis] gi|300259426|gb|EFJ43654.1| hypothetical protein VOLCADRAFT_106758 [Volvox carteri f. nagariensis] Length = 242 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 93/226 (41%), Positives = 140/226 (61%), Gaps = 2/226 (0%) Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 DWA ML RMY RWAE++ ++ GEEAG+KS L + G YG+L+ E+G HRL Sbjct: 1 MDWAEMLERMYLRWAEQQGHGVRLVDRAPGEEAGVKSVELEVAGRYVYGYLRAEKGTHRL 60 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID--TYRASGAGGQHVNTTDS 248 VR SP+++ R TSF+ + V PV+ ++ ++ ++ T R+ G GGQ+VN ++ Sbjct: 61 VRNSPFNAKGLRQTSFAGVDVMPVLGPGDLPDLDLNERDLEFSTMRSGGKGGQNVNKVET 120 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 VRI H+PTG+ V+C QERSQ +N+ A ++L+++L + ++ + W Sbjct: 121 GVRIVHLPTGISVKCTQERSQSQNREIAMDILKSRLLVVLEEQNARRVAEIRGDLVKAEW 180 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 G+QIR+YV PY++VKD RT +E + + VLDGDL DFM A L +K Sbjct: 181 GQQIRNYVFHPYKLVKDTRTGVETSDVAAVLDGDLADFMAAYLRMK 226 >gi|257069075|ref|YP_003155330.1| peptide chain release factor 1 [Brachybacterium faecium DSM 4810] gi|256559893|gb|ACU85740.1| bacterial peptide chain release factor 1 (bRF-1) [Brachybacterium faecium DSM 4810] Length = 378 Score = 173 bits (439), Expect = 3e-41, Method: Composition-based stats. Identities = 109/354 (30%), Positives = 172/354 (48%), Gaps = 15/354 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L DP L ++ A+ + R L+ + ++ D + EL Sbjct: 10 LAPLRREHAALQEAMADPALHEDAARARRVGRRYAELEGVLDAAARLEATAADLETVHEL 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + L + L+ + + D+ D LE+ AGAGG ES +A Sbjct: 70 EALGEGDEELAREAAQLRERLEQEREHLEDLLAPRDPDDARDVILEIKAGAGGEESALFA 129 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-------AYGWLKGEQGV 187 +LRMY +AE + ++ E L + E G K T+ I Y LK E GV Sbjct: 130 AEMLRMYRAYAESQGWRVEVLTSAESELGGFKDVTVAIAARGAGGSGSGVYAHLKHEAGV 189 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE-----ISESDCRIDTYRASGAGGQH 242 HR+ R+ +S R HTS + V P D++ E E ++ ++ RID +R+SG GGQ Sbjct: 190 HRVQRVPVTESQGRIHTSAVGVLVLPEADEADESELLAEAMAPANLRIDVFRSSGPGGQS 249 Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 VNTTDSAVRITH+PTGVVV CQ ++SQ +N+ QA +LR +L + ++E ++ S Sbjct: 250 VNTTDSAVRITHLPTGVVVSCQDQKSQLQNREQALRILRTRLLDARRAEQEAQSSAARRS 309 Query: 303 KTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + + +IR+Y P V D RT + + + VL GDL+D + ++ ++ Sbjct: 310 QVRTVDRSERIRTYNF-PESRVADHRTGYKAGNLAQVLSGDLEDLIASSREAER 362 >gi|156389000|ref|XP_001634780.1| predicted protein [Nematostella vectensis] gi|156221867|gb|EDO42717.1| predicted protein [Nematostella vectensis] Length = 273 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 107/249 (42%), Positives = 153/249 (61%), Gaps = 9/249 (3%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + EAD NDA LEV AG GG E+ +A+ + MY R+A +K+K + L+I + G K Sbjct: 6 IPKDEADENDAILEVRAGTGGQEASLFASEMFIMYQRFAAFKKWKFDILDIARSDTGGYK 65 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 A+ I G +G +K E GVHR+ R+ ++ R HTS ++ V P +++ IS + Sbjct: 66 EASASISGYGVFGKMKFEVGVHRVQRVPVTEAQGRVHTSTMTVAVLP-QPQEVDVIISPN 124 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D +IDT+RASGAGGQHVNTTDSAVRITHIP+G+VV Q+ERSQ KNKA+A +LRA+LY+ Sbjct: 125 DLKIDTFRASGAGGQHVNTTDSAVRITHIPSGMVVSSQEERSQFKNKAKAMQVLRARLYD 184 Query: 287 LELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD- 342 L Q++E + + +T+IG +IR+Y P V D R + + L+G Sbjct: 185 L--QRQEADSARVHARRTQIGTAERSEKIRTYNF-PQGRVTDHRIGMTSHTVDKFLEGGV 241 Query: 343 -LDDFMKAT 350 L+D + A Sbjct: 242 LLEDMIDAL 250 >gi|224130870|ref|XP_002320945.1| predicted protein [Populus trichocarpa] gi|222861718|gb|EEE99260.1| predicted protein [Populus trichocarpa] Length = 358 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 112/348 (32%), Positives = 175/348 (50%), Gaps = 15/348 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R + L P + E +E + L ++ I ++ + + L L Sbjct: 5 LSAIEHRSACLENFMNQPE--ASPTEFSRANKELRKLRGSMELITYLRTKQKEIDGLRSL 62 Query: 76 ALEEDDCSILQETSDN-----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 E + + + ++ ++ K L +AD D LEV AG+GG E+ Sbjct: 63 MTECPEDKDMLDMANEELSQAMEEEKRLQNLLLKSLLPRDDADERDCILEVRAGSGGEEA 122 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A + +MY R+++ +K E + I + + G K A+ I G + +G LK E G+HR+ Sbjct: 123 SLFAMDIFKMYERFSQNNGWKFEVVYITESDLKGYKEASAAISGADVFGKLKFESGIHRV 182 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ + R HTS S+ + P D +++++ D RIDTYR+ G+GGQH NTT+SAV Sbjct: 183 QRVPVTEKLGRVHTSAVSVAILPQ-ADEVDLQLRNEDLRIDTYRSGGSGGQHANTTNSAV 241 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+ V Q ERSQH NK++A +L AKLYE+E + + +IG G Sbjct: 242 RITHLPTGITVSIQDERSQHMNKSKALKVLCAKLYEMERSRL--HMSRSRLRSEQIGSGD 299 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354 +IR+Y P V D R I S +DV+ G+ LD F+ A L + Sbjct: 300 RSERIRTYNF-PQGRVTDHRVGITHHSINDVMQGESLDVFIDALLLQQ 346 >gi|126642199|ref|YP_001085183.1| peptide chain release factor 1 [Acinetobacter baumannii ATCC 17978] Length = 296 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 102/258 (39%), Positives = 147/258 (56%), Gaps = 6/258 (2%) Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + + DSN AYLE+ AG GG E+ ++ L RMY+++AE + ++ E L Sbjct: 24 EELESQLNILMIPKDPNDSNAAYLEIRAGTGGDEAAIFSGDLFRMYSKYAESQGWRIEVL 83 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 ++GE G K + G YG LK E G HR+ R+ +S R HTS ++ + P + Sbjct: 84 SENEGEHGGFKEVICRVDGDGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEI 143 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 D +EI+ +D RIDTYRASGAGGQH+N TDSAVRITHIPTG VV+CQ+ERSQHKNKA+ Sbjct: 144 DVDTNVEINPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGTVVECQEERSQHKNKAK 203 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEK 332 A +L ++L + A E + +G G +IR+Y P + D R N+ Sbjct: 204 AMALLVSRLENAKR--AAADAATSEMRRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTL 260 Query: 333 TSPSDVLDGDLDDFMKAT 350 +++GDL + + + Sbjct: 261 YKLDAIMEGDLTELLDSL 278 >gi|145348023|ref|XP_001418457.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578686|gb|ABO96750.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 373 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 120/350 (34%), Positives = 178/350 (50%), Gaps = 17/350 (4%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLILL 73 + A++R L + ++ +E ++ K+++ L+ Sbjct: 22 EAALRRREELIALISRQGV--DIDRVVEANKELSRIEPIAEQYEVVKKLRAEKASLEELV 79 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQ-----FESLLSGEADSNDAYLEVHAGAGGT 128 A D L E + R Q L +AD A LEV AGAGG Sbjct: 80 RDASSGGDSKELAELAREELRAVDIDLPDQELALQLLFLPHDDADDRGAILEVRAGAGGD 139 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ +A L RMY A K ++ + L + + + G++ A+ I G +G LK E GVH Sbjct: 140 EAALFAAELFRMYALHARKSGWRFDTLNVSETDGKGVREASAEILGKGVFGRLKFESGVH 199 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ R+ ++ R HTS +SI V P + +E++I E D RIDT RASGAGGQHVNTT+S Sbjct: 200 RVQRVPETETQGRVHTSTASIAVLPH-AEEVEMDIKEEDVRIDTMRASGAGGQHVNTTNS 258 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 AVR+TH PTG+ V Q ERSQHKNKA+A+++L+A+LY+LE +K + + S + IG Sbjct: 259 AVRLTHAPTGIQVVIQDERSQHKNKAKAFSVLKARLYDLEREKMAKERSELRS--SLIGT 316 Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 G +IR+Y VKD R + + ++DG L D + L K+ Sbjct: 317 GDRSERIRTYNFA-QGRVKDHRVEGTISDVNALMDGFLLDEITEKLKRKR 365 >gi|210076204|ref|XP_504279.2| YALI0E22759p [Yarrowia lipolytica] gi|199426952|emb|CAG79876.2| YALI0E22759p [Yarrowia lipolytica] Length = 389 Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats. Identities = 84/334 (25%), Positives = 157/334 (47%), Gaps = 11/334 (3%) Query: 24 SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83 P+ ++ + K L+ + L + ++ + L+ + + + Sbjct: 44 KEYEALQASPN--EDQFKDKKLIAKINLLGQVTHELDSYRNSIVQYDELMSMCDDPELKK 101 Query: 84 ILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 ++ ++ + ++ + L + +E+ G GG E+ + + LL MYT Sbjct: 102 DAEDEIPTVEAEAEKAIKKLETLLLPTHPYGDIGCIIEMRPGIGGEEACLFTDNLLNMYT 161 Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 +A++ + + + ++ GI L + G +Y L+ E GVHR+ R+ +S+ R Sbjct: 162 GYADEMGWPYQITNVTRNDKGGITEVILSVDGEGSYNMLQHEGGVHRVQRVPVTESSGRV 221 Query: 203 HTSFSSIWVYPVVDDS----IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 HTS +++ V P + +S +I+ + + RID RA GAGGQHVN T+SAVR+ HIPT Sbjct: 222 HTSAAAVIVLPQISESSVAADDIQFAPGEVRIDVMRAQGAGGQHVNKTESAVRLVHIPTK 281 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQIRSYVL 317 +V Q RSQ +NK A+ +LR +L E + +++ + +S+ + +IR+Y Sbjct: 282 TMVVMQNSRSQRQNKEMAFMILRGRLAEQKRREQAAKSKNARTSQVSATDRSDKIRTYNF 341 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKAT 350 V D R + V+ G LD ++A Sbjct: 342 H-QNRVTDHRCGY-SGNLDVVMSGKKLDAVLEAL 373 >gi|194246573|ref|YP_002004212.1| Bacterial peptide chain release factor 1 [Candidatus Phytoplasma mali] gi|193806930|emb|CAP18362.1| Bacterial peptide chain release factor 1 [Candidatus Phytoplasma mali] Length = 347 Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats. Identities = 96/349 (27%), Positives = 169/349 (48%), Gaps = 17/349 (4%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +FD Q+ L N + L +E +L + E + + L Sbjct: 1 MFDKLKKINQKYLNLQKLILLET---NSKKKVQLFKEIGNLKEIVDNYNEYLNLEKELLK 57 Query: 72 LLELALEEDDCSI------LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 + + + + QE ++I E++ ++ D+ + +++ A Sbjct: 58 IKHFIQNDSNNNDDLLNLAFQEQEILNEKIHNELKKIKYLLFPLEPEDNKNVIMQIKGAA 117 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ ++ L RMY ++AE + +K E L + + GI S ++ G Y +LK E Sbjct: 118 GGDEANLFSADLFRMYCKYAELKNWKLEILNLMTNIKGGISSVEFILSGKKVYYFLKYES 177 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ + R HTS S++ V P D I+ +I D R DT+ +SG GGQ VNT Sbjct: 178 GVHRVQRVPTTEVQGRIHTSTSTVLVMP-EVDEIDFKIDWKDIRFDTFNSSGPGGQSVNT 236 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T SAVR+TH+P+ + V CQ +SQH+NK +A+++L+A++Y+ ++ E N + K Sbjct: 237 TKSAVRLTHLPSNISVACQIGKSQHENKKKAFSLLKARIYDKIHKQNMEKEN--KKRKFL 294 Query: 306 IG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 +G +IR+Y P + D R ++ +++G LD ++ + Sbjct: 295 VGDGQRSEKIRTYNY-PQNRITDHRISLNLKKLDIIMEGKLDFIIEPLI 342 >gi|167470794|ref|ZP_02335498.1| peptide chain release factor 1 [Yersinia pestis FV-1] Length = 303 Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats. Identities = 105/295 (35%), Positives = 155/295 (52%), Gaps = 3/295 (1%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + KE + D + Sbjct: 9 LEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSAQDDIEAAEMM 68 Query: 76 ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + +E R + + Q L D D +LE+ AG GG E+ +A Sbjct: 69 LDDLEMREMAQEELKIAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 + RMY+R+AE R++K E + +GE G K I G +G LK E G HR+ R+ Sbjct: 129 GDMFRMYSRYAETRRWKVEIMSASEGEHGGYKEIIAKISGDGVFGQLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ EI+ D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVMPAIPEAELPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 IPTG+VV+CQ ERSQHKNKA+A ++L A++ E+QKR+ + +G G Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQ--LAEASERRNLLGTG 301 >gi|50286945|ref|XP_445902.1| hypothetical protein [Candida glabrata CBS 138] gi|49525208|emb|CAG58821.1| unnamed protein product [Candida glabrata] Length = 405 Score = 172 bits (435), Expect = 9e-41, Method: Composition-based stats. Identities = 106/343 (30%), Positives = 163/343 (47%), Gaps = 21/343 (6%) Query: 19 AVQRLSFLNTKTE---DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + L+ L + D + + LM L + KE + ++++ Sbjct: 53 VSKELAELEKQISNGYDEDV---QRKYNSLM----SLQDVYDRYKEQLGNYRELKEMIDV 105 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 + + + + + +K + + LE+ G GG+E+ +A Sbjct: 106 DKSLAEEAAAE-LHELVPNLKKTTQDLLHRLIPPHPFAEKACMLELRPGVGGSEAMIFAK 164 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LL MY +A +K+K + I + E GI A L I P Y LK E GVHR+ RI Sbjct: 165 DLLNMYIGYAHNKKWKHHIVSIRENEAGSGIMDAVLAIDEPGTYNILKYEAGVHRVQRIP 224 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDS------IEIEISESDCRIDTYRASGAGGQHVNTTDS 248 +S R HTS +++ V P + D E + RID RASG GGQHVNTT+S Sbjct: 225 ATESKGRTHTSTAAVVVLPQLGDEGKDLDAFERSFKPEEIRIDVKRASGKGGQHVNTTES 284 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIG 307 AVR+THIPTG+++ Q ERSQH+NKA+A+++LR+KL ELE Q++ E + T + Sbjct: 285 AVRLTHIPTGIMIHMQDERSQHRNKAKAFSILRSKLAELEQQQKAEKERQVRKEQVTTMD 344 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKA 349 +IR+Y + D R + V+ G+ LDD + A Sbjct: 345 RSDKIRTYNFS-QNRITDHRCGLNLYDLEGVISGERLDDVINA 386 >gi|145347488|ref|XP_001418196.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578425|gb|ABO96489.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 278 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 107/260 (41%), Positives = 162/260 (62%), Gaps = 2/260 (0%) Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 ++ + LL G+ D+ A L+++AGAGG ++QDW ML RMY W EKR F A E Sbjct: 14 KALDAWELRRLLGGKYDAFGAVLQIYAGAGGLDAQDWTEMLERMYLGWCEKRGFAVRATE 73 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP--V 214 +GE G+K+ATL ++G AYG+L E+G HRLVR SP++ ++ R TSF+++ V P Sbjct: 74 RLEGEGGGLKTATLEVEGRYAYGYLSSEKGTHRLVRQSPFNKDAARQTSFAAVDVIPLFE 133 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 D +++ ++D + T R+ GAGGQ+VN ++AVRI HIPTG+ V+ ++ R+Q N+ Sbjct: 134 EDMEEVVKVPDTDLEVTTMRSGGAGGQNVNKVETAVRIKHIPTGITVKAEEHRTQQLNRQ 193 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A ++AKL L + R + WG+QIR+YVL PY++VKD+RT +E + Sbjct: 194 AAMLRIKAKLTALAEEARVADIAELRGDIVKAEWGQQIRNYVLHPYKLVKDVRTGVETSD 253 Query: 335 PSDVLDGDLDDFMKATLAIK 354 + VL+G LD++M L K Sbjct: 254 ANKVLNGALDEYMNGYLRWK 273 >gi|255716670|ref|XP_002554616.1| KLTH0F09482p [Lachancea thermotolerans] gi|238935999|emb|CAR24179.1| KLTH0F09482p [Lachancea thermotolerans] Length = 400 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 100/347 (28%), Positives = 153/347 (44%), Gaps = 21/347 (6%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 + + L L +V ++ L + + L ++ Sbjct: 40 EKYAEELKALEKWMAKGEGTFDVER----QKKFSRLCAVVDSFHRYSREIELLKDLQDMM 95 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTESQDWA 134 ++ + R +LE L LE+ G GG E+ +A Sbjct: 96 KDDPSLRDEAQQEMAEIRPQLEKTSSSLLGQLLPPHPFADRPCILEIRPGVGGIEAMIFA 155 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 LL MY +A +++K + E GI A L I P +Y L+ E GVHR+ RI Sbjct: 156 QDLLGMYINYAHNKRWKYHIISQSANESGSGIVDAILSIDEPGSYDKLRFEAGVHRVQRI 215 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIE-------IEISESDCRIDTYRASGAGGQHVNTT 246 ++ R HTS +++ V P + + E + RID RA G GGQHVNTT Sbjct: 216 PATETKGRTHTSTAAVVVLPQMAEDNEKEAESYERTFKPDEIRIDVMRARGKGGQHVNTT 275 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVR+TH P+G+V+ Q ERSQHKNKA+A+ +LRA+L E+E + +EE A K ++ Sbjct: 276 DSAVRLTHYPSGIVINMQNERSQHKNKAKAFAILRARLAEIEQKAKEEKARAA--RKGQV 333 Query: 307 G---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKA 349 ++R+Y P + D R ++ G+ LDD + A Sbjct: 334 STTDRSDKVRTYNF-PQNRITDHRCGFNLHDMEGIMAGERLDDVIDA 379 >gi|226356572|ref|YP_002786312.1| peptide chain release factor 1 [Deinococcus deserti VCD115] gi|259585218|sp|C1CWJ1|RF1_DEIDV RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|226318562|gb|ACO46558.1| putative Peptide chain release factor 1 (RF-1) [Deinococcus deserti VCD115] Length = 366 Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats. Identities = 99/349 (28%), Positives = 151/349 (43%), Gaps = 13/349 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + DP + L R + L ++ ++E + D EL Sbjct: 5 LSELAAEFGMVERALGDPAALADPQAYTRLTRRHRELLPLVTLLREREALESDLRGAQEL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + Q + + L + D + LE+ AGAGG E+ + Sbjct: 65 LSDPDMRELAQNEITEATARLEQLGAELEVLLLPTDPDDLKNVILELRAGAGGAEAGLFV 124 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE R + LE + + G I G A+ K E+GVHR+ R+ Sbjct: 125 MDLLRMYTRYAEDRGLRLNVLEASESDLGGASKVVAEISGEFAFRAFKWERGVHRVQRVP 184 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + + S+ RID +R+ GAGGQ VNTTDSAVR + Sbjct: 185 ATESQGRIHTSTVTVAVLPEAEQGEVQ-LDLSEVRIDVFRSQGAGGQGVNTTDSAVRAVY 243 Query: 255 I---PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 P ++V CQ RSQ KN+ +A +L ++L E E R+ A ++G G + Sbjct: 244 RAGTPDEIMVVCQDGRSQIKNREKALVVLASRLAERERAARD--AQEARDRAAQVGSGER 301 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTS--PSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R + + V+ G L + A ++ Sbjct: 302 SEKIRTYNY-PQNRVTDHRLEGDSKNHPLDSVMAGGLGPVVSALARDER 349 >gi|260944632|ref|XP_002616614.1| hypothetical protein CLUG_03855 [Clavispora lusitaniae ATCC 42720] gi|238850263|gb|EEQ39727.1| hypothetical protein CLUG_03855 [Clavispora lusitaniae ATCC 42720] Length = 406 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 99/346 (28%), Positives = 157/346 (45%), Gaps = 20/346 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + S L + + + + + Q + + LLE+ Sbjct: 48 VETMTKEFSVLEKQMSSNEF--DQDTVVK----FSSISSVLDKYHTYQQDMENLSSLLEI 101 Query: 76 ALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 E+ D +++E ++ + R+ + L + A LE+ G GG+E+ Sbjct: 102 INEDLDAELVEEANEELKEVVPRVVKASSSLKKRLLPPIVHSNKPAILELRPGVGGSEAA 161 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + LL MY +A + + L + A + I P AY L+ E GVHR+ Sbjct: 162 LFTQDLLNMYINFANYMSWPYKILSESHSSNGFLNEAIISIDAPGAYNVLRHESGVHRVQ 221 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRIDTYRASGAGGQHVN 244 RI +S R HTS +++ V P + D E + + RIDT R+ G GGQHVN Sbjct: 222 RIPATESKGRIHTSTAAVVVLPKMSDGTEQSLKEDERSFAPGEIRIDTMRSGGKGGQHVN 281 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK- 303 TTDSAVRI HIPTG++V Q ERSQ KNKA+A+++LR++L ++E +K S + Sbjct: 282 TTDSAVRIVHIPTGIMVVQQDERSQPKNKAKAFSILRSRLAQMEREKEIAEQKKLRSDQV 341 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMK 348 T +IR+Y P V D R N + G L++ ++ Sbjct: 342 TTTDRSDKIRTYNY-PQNRVTDHRCNYSVHDLPGFMAGPKLEEMIE 386 >gi|145627802|ref|ZP_01783603.1| peptide chain release factor 2 [Haemophilus influenzae 22.1-21] gi|144979577|gb|EDJ89236.1| peptide chain release factor 2 [Haemophilus influenzae 22.1-21] Length = 183 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 113/182 (62%), Positives = 141/182 (77%), Gaps = 1/182 (0%) Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 + G A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID Sbjct: 1 MSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRID 60 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 YRASGAGGQHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA L+AKLYELELQK Sbjct: 61 VYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQK 120 Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + E +K++IGWG QIRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 121 KNADKQAMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASL 179 Query: 352 AI 353 Sbjct: 180 KA 181 >gi|217963389|ref|YP_002349067.1| peptide chain release factor 2, programmed [Listeria monocytogenes HCC23] gi|217332659|gb|ACK38453.1| peptide chain release factor 2, programmed [Listeria monocytogenes HCC23] Length = 304 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 139/287 (48%), Positives = 187/287 (65%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 R++ L + DP+ W + A+ ++ E +++ I LEL E Sbjct: 1 MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D + +E +++ + + + +LS D N+A LE+H GAGGTESQDW +MLL Sbjct: 61 EADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLL 120 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RW+EK+ FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS Sbjct: 121 RMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDS 180 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 + RRHTSF S+ V P +DD IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G Sbjct: 181 SGRRHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSG 240 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 +VV CQ ERSQ KN+ QA ML+ KLY+ E +++E + + Sbjct: 241 IVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKK 287 >gi|221128345|ref|XP_002163029.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 400 Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats. Identities = 102/331 (30%), Positives = 174/331 (52%), Gaps = 10/331 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ + + LN K D E K E + A+ + + + + L L Sbjct: 43 IEDVMFKYKQLNEKLLDSKNLT-PTEIKNYSSECHRMKPAVEIYNLLLKKREEIIELAAL 101 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGAGGTESQDW 133 ++ + + + ++ + + + + DSN+A +E+ AG GG E+ + Sbjct: 102 GIDNKEMKEFVQEEISACQVCIADLELRLLDSIIPKDKDDSNNAIMEIRAGTGGREAAIF 161 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 A +L MY +++ ++K E L+ + + G+K ++ I G +G LK E GVHR+ R+ Sbjct: 162 AAEMLSMYDKYSSSNQWKFEVLDESESTDGGLKEVSVNIIGSGVFGKLKHEIGVHRVQRV 221 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 +S R HTS ++ V P +SI++ ++ D ++DT+R+SGAGGQHVNTTDSAVR+T Sbjct: 222 PITESLGRVHTSTVTVAVLP-QPESIDVVLNMKDVKVDTFRSSGAGGQHVNTTDSAVRLT 280 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 HIP+G+VV Q +RSQ +NK++A +L A+LY+ E + + E +T+IG G Sbjct: 281 HIPSGLVVAVQSQRSQIENKSRALKILSAQLYDFERTRVVQER--VELRRTQIGSGHRSE 338 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 +IR+Y P + D R + SD + G Sbjct: 339 RIRTYNF-PQDRITDHRIGETLSGLSDFMLG 368 >gi|254572401|ref|XP_002493310.1| hypothetical protein [Pichia pastoris GS115] gi|238033108|emb|CAY71131.1| hypothetical protein PAS_chr3_1249 [Pichia pastoris GS115] gi|328352673|emb|CCA39071.1| Peptide chain release factor 1 [Pichia pastoris CBS 7435] Length = 405 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 100/343 (29%), Positives = 158/343 (46%), Gaps = 18/343 (5%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 +L L +K + R+ L + + E + L + E Sbjct: 48 LSSQLKDLESKLSSSDEFSYQD-----SRDYSLLVSTVETYNEFLRETENVEELQRMLHE 102 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTESQDWANM 136 + E+ KL+ + ++ L + LE+ G GG+E+ + Sbjct: 103 DPSLKEEIESELTQAAPKLKRLTSKLKTKLLPPHEFADKPCILELRPGIGGSEANLFTED 162 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 LL MY ++A+ ++ E + + G+ A ++I P +Y L+ E GVHR+ R+ Sbjct: 163 LLSMYEKYAQHHRWSYEIISRNPHPSGNGLVDAAIVINEPGSYNRLRFEAGVHRVQRVPA 222 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSI---EIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 +S R HTS +++ V P +D+ D RID RASG+GGQHVNTT+SAVR+ Sbjct: 223 TESKGRTHTSTAAVVVLPKIDEDDTSLNRTFLPDDIRIDVMRASGSGGQHVNTTESAVRV 282 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WG 309 THIP+G+VV Q ERSQHKNKA+A +L+A+L E E E+ K ++ Sbjct: 283 THIPSGIVVLIQDERSQHKNKAKALTILKARLAEKER--VEKEEKELAERKGQVSSTDRS 340 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATL 351 +IR+Y + D R + L+G LD+ + A L Sbjct: 341 DKIRTYNFS-QNRITDHRCGYSLHNVEGCLNGYKLDEIIDALL 382 >gi|169628533|ref|YP_001702182.1| peptide chain release factor 1 [Mycobacterium abscessus ATCC 19977] gi|238688924|sp|B1MLV1|RF1_MYCA9 RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|169240500|emb|CAM61528.1| Probable peptide chain release factor 1 (RF-1) [Mycobacterium abscessus] Length = 356 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 113/332 (34%), Positives = 166/332 (50%), Gaps = 9/332 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D + + L + DP L + A+ R L ++ +++ D EL Sbjct: 7 IDAMLAEHAELEKQLADPALHADAAAARKAGRRFAMLSPIVATHRKLATARDDLATAREL 66 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 + ++ + ++ D +D LEV +G GG ES +A Sbjct: 67 SADDPSFADEVTELESSIAELETQLSDML--APRDPHDGDDILLEVKSGEGGEESALFAA 124 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-----KGPNAYGWLKGEQGVHRL 190 L RMY R+AE+ +K L+ + + G K ATL I + LK E GVHR+ Sbjct: 125 DLARMYIRYAERHGWKVTVLDETESDLGGYKDATLAIASKGDSADGVWSRLKFEGGVHRV 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ +S R HTS + + VYP ++ EI+I ESD RID YR+SG GGQ VNTTDSAV Sbjct: 185 QRVPVTESQGRVHTSAAGVLVYPEPEEVEEIQIDESDLRIDVYRSSGKGGQGVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309 RITH+PTG+VV CQ ERSQ +NKA+A +L A+L L ++ + A+ G +S+ + Sbjct: 245 RITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQALAEEQAQADASAGRASQIRTVDRS 304 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 +IR+Y P + D R + + VLDG Sbjct: 305 ERIRTYNF-PENRITDHRVGFKAHNLDQVLDG 335 >gi|302785656|ref|XP_002974599.1| hypothetical protein SELMODRAFT_101651 [Selaginella moellendorffii] gi|300157494|gb|EFJ24119.1| hypothetical protein SELMODRAFT_101651 [Selaginella moellendorffii] Length = 386 Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats. Identities = 116/350 (33%), Positives = 183/350 (52%), Gaps = 23/350 (6%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 + R + L+ +P + + E + +E + LD ++ IK ++ + + + L EL Sbjct: 26 SIEDRHACLSKALLEPGIASD--ELIKMNKELRKLDYSVDMIKALRAKEKEVIGLKELVK 83 Query: 78 EEDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA--------G 124 E + ++ + ++ + + EADS LE G Sbjct: 84 ESVEDEEMRRLASGELQTATREVRDAQHDVLLKLIPKDEADSRGCILEASCLICFIYLLG 143 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 AGG E+ +A+ L +MY ++A ++ E L I + G K A+ +I G + YG LK E Sbjct: 144 AGGDEASIFASDLFKMYEKYAANNSWRFEVLSITTTDTRGYKEASAVISGDDVYGALKFE 203 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ + R HTS +S+ + P + +++EI + +IDTYRA GAGGQHVN Sbjct: 204 SGVHRVQRVPVTEKAGRIHTSTASVAILP-EANEVDVEIRNDEIKIDTYRAGGAGGQHVN 262 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TT SAVR+TH PTG+VV Q ERSQHKNKA+A ++L A+LYELE + A+ E + Sbjct: 263 TTCSAVRVTHAPTGIVVAIQDERSQHKNKAKALSILYARLYELERSR--AAASRSELRQD 320 Query: 305 EIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKAT 350 +IG +IR+Y P V D R + + S +++G L+ F+ A Sbjct: 321 QIGSSDRSERIRTYNF-PQGRVTDHRVGVTQHSIEQIMEGIGLEIFVNAL 369 >gi|40062641|gb|AAR37562.1| peptide chain release factor 1 [uncultured marine bacterium 313] Length = 358 Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats. Identities = 106/335 (31%), Positives = 166/335 (49%), Gaps = 14/335 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72 V L + + + +E + I + + + + Sbjct: 7 IQQIVNTYKTLEKELASSDIG--KKDFVKKSKEYSGIGEIIDEAKGYLDFEKEKLELDKI 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGTES 130 +E + + L ++ N K + K + EADS +A +E+ AG GG E+ Sbjct: 65 IEDKKSDKEMIQLVKSELNELLKKKQSYEKILKVYLLPKDEADSKNAIVEIRAGTGGLEA 124 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 + L +MY + +K+ E + + E G K LLIKG N Y +LK E GVHR+ Sbjct: 125 TLFVADLYKMYEKVCLNKKWSFEIINLSKSEAGGFKEVILLIKGANIYSFLKFESGVHRV 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + ++++I + D RID +R++GAGGQ VNTTDSAV Sbjct: 185 QRVPETETQGRVHTSAATVAVLP-EAEEVDVKIEDKDLRIDVFRSTGAGGQSVNTTDSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG+VV Q E+SQHKN+A+ +LR+++YE E ++ K +IG G Sbjct: 244 RITHIPTGIVVTNQDEKSQHKNRAKGMKILRSRIYESER--EKKEKERSRDRKNQIGTGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 +IR+Y P V D R N+ + L+GD Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTIHKLQEFLNGD 335 >gi|261749210|ref|YP_003256895.1| peptide chain release factor 1 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497302|gb|ACX83752.1| peptide chain release factor 1 [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 364 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 101/359 (28%), Positives = 182/359 (50%), Gaps = 21/359 (5%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + + + ++ + + PH+ N + K L+++ + L+ ++ ++ + +L Sbjct: 1 MKKISLIKKFEILEKEFHGIGNSIIQPHIVSNQKKYKTLLKKYRKLEKVVNIYEKYKKKL 60 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES-----------LLSGEADSN 115 + + D + + +I ++ + +S + E D Sbjct: 61 TALQEANSILKNDSDPEMKEIAYLEKNKILEDLSNIEKKSDDLLFSTSPTGRENLENDHR 120 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI--- 172 +A +E+ +G GG E+ + +LRMY + ++ +K + + G G K L + Sbjct: 121 NAIVELRSGTGGDEACLFVEDILRMYIMYFKQVGWKYKIIHAQKGGIQGYKEIILDVSGK 180 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G YG LK E GVHR+ RI +S R HTS ++ V P IE++I SD + DT Sbjct: 181 EGEGVYGNLKFESGVHRVQRIPKTESQGRVHTSAITVAVLP-EIKDIEMKIHLSDIKKDT 239 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +R+SG+GGQHVN T+SAVR+THIPT + V+CQ+ERSQHKN +A N+LR+++Y+ E +KR Sbjct: 240 FRSSGSGGQHVNKTESAVRLTHIPTKITVECQEERSQHKNFEKAMNVLRSRIYQNEKEKR 299 Query: 293 EEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + +I K+ + G + IR+Y P V D R + + ++G++ + + Sbjct: 300 FKERSI--KRKSLVSTGDRSVKIRTYNY-PKGRVTDHRIHKSIYNLVGFMNGNIQEMIN 355 >gi|159474546|ref|XP_001695386.1| hypothetical protein CHLREDRAFT_49544 [Chlamydomonas reinhardtii] gi|158275869|gb|EDP01644.1| hypothetical protein CHLREDRAFT_49544 [Chlamydomonas reinhardtii] Length = 336 Score = 169 bits (429), Expect = 4e-40, Method: Composition-based stats. Identities = 108/309 (34%), Positives = 156/309 (50%), Gaps = 15/309 (4%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 + + RE L + + L LA + D + + + Sbjct: 8 RDVGREYARLQPLAHGYSRLLQVRAELSDLAGLARDPDAGVRAMAADEAAALRQEAADLT 67 Query: 103 Q---FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR-----WAEKRKFKTEA 154 + + + S A LEV AGAGG E+ +A+ LL MY R R + E Sbjct: 68 RRLLLALVPPEPSASRPALLEVRAGAGGAEAALFASELLAMYRRLAQARTCASRGWTWEV 127 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 LE+ + E G++ AT+ G YG L GE GVHR+ R+ ++ R HTS +++ V P Sbjct: 128 LELGNSEHGGVRHATVAGAGEGVYGVLSGESGVHRVQRVPVTEAGGRLHTSTAAVVVLPQ 187 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 D +++ + E D R++T RASGAGGQHVN TDSAVRITH+PTG+VV CQ ERSQH N+A Sbjct: 188 -ADEVDVRLREEDLRVETMRASGAGGQHVNVTDSAVRITHLPTGLVVSCQNERSQHLNRA 246 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331 A +LR++LY+LE Q+R GE + G ++R+Y P V D R ++ Sbjct: 247 AALKVLRSRLYDLEAQRR--ARQAGEQRSALVASGDRSERVRTYNF-PQGRVTDHRIHLT 303 Query: 332 KTSPSDVLD 340 VL+ Sbjct: 304 VHDLGSVLE 312 >gi|307069624|ref|YP_003878101.1| putative peptide chain release factor RF-1 [Candidatus Zinderia insecticola CARI] gi|306482884|gb|ADM89755.1| putative peptide chain release factor RF-1 [Candidatus Zinderia insecticola CARI] Length = 345 Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats. Identities = 94/324 (29%), Positives = 165/324 (50%), Gaps = 6/324 (1%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 L K +D +++ N+ + K + + + I + + + + +++ +I Sbjct: 23 LLKKIQDKNIFNNLKKYKKICKNIFKIRPIIKYYNLYKKEINKIKENKKFINDKEFKNIA 82 Query: 86 QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 + + + K ++++ + +N LE+ A +GG E+ + L +MY ++ Sbjct: 83 LDEIKKCKDKIFFLNKKIEKNIIINKNINNKILLEIRAASGGEEAALFVKDLYKMYFNFS 142 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 +K +K + L G K + I G N+Y LK E G HR+ RI +S+ + HTS Sbjct: 143 QKNNWKIKILSFIKSNNNGYKEIIIQIYGLNSYSLLKNESGNHRVQRIPITESHDKVHTS 202 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 +I V + ++ +I I+ D +I T++ASGAGGQHVN TDSAVRI HIPT + V+CQ Sbjct: 203 TCTIAVINKIKNNKKILINNKDLKIHTFKASGAGGQHVNKTDSAVRIFHIPTKITVECQS 262 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQM 322 RSQH NK A +L+ K+ L++ K + K+ IG G +IR+Y P Sbjct: 263 NRSQHINKKNALKILKYKI--LKINKNSIKNKEDKFRKSLIGTGKRSEKIRTYNF-PQNR 319 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDF 346 V + + N+ + + +L+G+L+ Sbjct: 320 VTNHKINLTVYNLNSILNGNLEKI 343 >gi|241998776|ref|XP_002434031.1| protein releasing factor, putative [Ixodes scapularis] gi|215495790|gb|EEC05431.1| protein releasing factor, putative [Ixodes scapularis] Length = 356 Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats. Identities = 98/341 (28%), Positives = 163/341 (47%), Gaps = 18/341 (5%) Query: 23 LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82 L + + E + + L + L + ++ +K+I + + L +L + Sbjct: 6 LKQVEEELEKCS--HDSQRTRELTAKMSRLSSIVALVKKINELNREMEGLKDLERDFTRT 63 Query: 83 SILQETSDNLQRIKLEVEYKQFESL-------LSGEADSNDAYLEVHAGAGGTESQDWAN 135 S + K + + D+ + LEV AG GG E+ + Sbjct: 64 GDKDMVSMAVDDQKNCQAELKQLNDQILDQIVPPDPIDTTEVLLEVTAGVGGQEAMLFTK 123 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 +L MY R+A + + ++ + G++ A+L + G +A LK E GVHR+ R+ Sbjct: 124 DVLDMYVRYASWKGWSCRIVDYETSDMGGVRHASLNVGGRDAGKCLKFESGVHRVQRVPQ 183 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 + R HTS ++ V P + +++ ++ D + T RASG GGQHVNTT+SAV+I HI Sbjct: 184 TERAGRIHTSTMAVAVLP-LPAEVDVVLNSKDLVMKTKRASGPGGQHVNTTESAVQIQHI 242 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWGRQI 312 P+G++V+ QERSQ +NK A LRAKLYE+EL K+ ++ K ++ G +I Sbjct: 243 PSGIMVESSQERSQLQNKELALKKLRAKLYEIELNKK--TSSHVTQRKLQVGTRGRSEKI 300 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351 R+Y V D R + + D L G +LD ++ L Sbjct: 301 RTYNFA-QDRVTDHRIPVTVHNVEDFLHGQDNLDSVIRRLL 340 >gi|167041273|gb|ABZ06029.1| putative peptidyl-tRNA hydrolase domain protein [uncultured marine microorganism HF4000_005D21] gi|167045778|gb|ABZ10424.1| putative peptidyl-tRNA hydrolase domain protein [uncultured marine bacterium HF4000_APKG3108] Length = 358 Score = 169 bits (427), Expect = 6e-40, Method: Composition-based stats. Identities = 108/335 (32%), Positives = 169/335 (50%), Gaps = 14/335 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72 V L + + N + + + I+ + + + + Sbjct: 7 VKQIVSTYETLEKELASGDI--NKKDFANKSKGYSSIREVINQARSYLGFEKEKVELEKI 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGTES 130 +E + D L + K E K + + EADS +A LE+ AG GG E+ Sbjct: 65 IEDKKSDKDMIELAKNELIQLSKKKEENEKILKVYLLPNDEADSKNAILEIRAGTGGLEA 124 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 + L +MY R +K+ E + + E G K LLIKG N Y +LK E GVHR+ Sbjct: 125 TLFVADLYKMYERVCLNKKWSFEIINLSKSEAGGFKEVILLIKGTNIYSFLKFESGVHRV 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + ++++I+E D RID +R+SG GGQ VNTTDSAV Sbjct: 185 QRVPETETQGRVHTSAATVAVLP-EAEEVDVKINEKDLRIDVFRSSGPGGQSVNTTDSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+ V Q E+SQHKN+A+A +LR+++Y+ E +K+++ + +IG G Sbjct: 244 RITHLPTGIAVSQQDEKSQHKNRAKAMKILRSRVYDAEREKKDKKRSKDRK--NQIGSGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 +IR+Y P V D R N+ + L+GD Sbjct: 302 RSERIRTYNF-PQSRVTDHRINLTIHKLQEFLNGD 335 >gi|297182635|gb|ADI18793.1| protein chain release factor a [uncultured SAR11 cluster bacterium HF4000_37C10] Length = 358 Score = 169 bits (427), Expect = 7e-40, Method: Composition-based stats. Identities = 110/335 (32%), Positives = 168/335 (50%), Gaps = 14/335 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72 V L + + N + + + I+ + + + + Sbjct: 7 VQQIVSTYETLEKELASGDI--NKKDFANKSKGYSSIREVINQARSYLSFKKEQAELEKI 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGTES 130 +E + D L + K E K + EADS +A LE+ AG GG E+ Sbjct: 65 IEDKKSDKDIIELAKNELIQLSKKREENEKILKVYLLPKDEADSKNAILEIRAGTGGLEA 124 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 + L +MY R +K+ E + + E G K LLIKG N Y +LK E GVHR+ Sbjct: 125 TLFVADLYKMYERVCLNKKWSFEIINLSKSEAGGFKEVILLIKGTNIYSFLKFESGVHRV 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ ++ R HTS +++ V P + I++ I+E D RID +R+SG GGQ VNTTDSAV Sbjct: 185 QRVPETETQGRVHTSAATVAVLP-EAEEIDVNINEKDLRIDVFRSSGPGGQSVNTTDSAV 243 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITH+PTG+VV Q E+SQHKN+A+A +LR+++Y+ E +K+++ + +IG G Sbjct: 244 RITHLPTGIVVSQQDEKSQHKNRAKAMKILRSRVYDAEREKKDKKRSKDRK--NQIGSGD 301 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 +IR+Y P V D R N+ + L+GD Sbjct: 302 RSERIRTYNF-PQSRVTDHRINLTIHKLQEFLNGD 335 >gi|262341278|ref|YP_003284133.1| peptide chain release factor 1 [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272615|gb|ACY40523.1| peptide chain release factor 1 [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 361 Score = 169 bits (427), Expect = 8e-40, Method: Composition-based stats. Identities = 101/347 (29%), Positives = 178/347 (51%), Gaps = 18/347 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + + ++ P++ + + K+L+++ L+ +S ++ +L + Sbjct: 10 LEGSKKEFYEISKSIIQPNIISDQKKYKILLKKYLKLEKIVSLYEKYNKKLALLQEADFI 69 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL----------SGEADSNDAYLEVHAGA 125 + D + + S +I + + ES + +A +E+ +G Sbjct: 70 LKNDSDADLKELASIEKYKILENLSSIEKESYDLIFSLSNETEETTENHRNAIVELRSGT 129 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWLKGE 184 GG E+ + +LRMYT + +K +K + + G G K L + YG LK E Sbjct: 130 GGDEACLFVEDILRMYTMYFKKSGWKYKIIHAQKGGIKGYKEIILDVNGKEGVYGNLKFE 189 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ RI +S R HTS ++ V P V D IE+ I+ SD + +T+R+SGAGGQHVN Sbjct: 190 SGVHRVQRIPKTESQGRVHTSAITVAVLPQVKD-IEVNINLSDIKKETFRSSGAGGQHVN 248 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T+SAVR+TH+P+ + V+CQ+ERSQHKN +A N+LR+++Y+ E +KR + +I K+ Sbjct: 249 KTESAVRLTHLPSKITVECQEERSQHKNFEKAINVLRSRIYQNEKEKRLKEISI--KRKS 306 Query: 305 EIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + G + IR+Y P V D R + + ++G++ + + Sbjct: 307 LVSTGDRSVKIRTYNY-PKSRVTDHRIHKSIYDLAGFMNGNIQEMIN 352 >gi|28950278|emb|CAD71246.1| related to translation releasing factor RF-1, mitochondrial [Neurospora crassa] Length = 430 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 93/364 (25%), Positives = 156/364 (42%), Gaps = 36/364 (9%) Query: 18 NAVQRLSFLNTKTE---DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 L + E +P A + + L + + L + LLE Sbjct: 43 KLAAEHKQLTKQLESEYEPTAA---KRAGEISKVVAALQEL----DKAKAALDELNGLLE 95 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 E + + ++ +E+H G GGTE + +A Sbjct: 96 SDDAELRQLANDDLDATKKHLETLGLNLSATLTPKHPFADMPCLIELHPGPGGTEGRHFA 155 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGE--------EAGIKSATLLIKGPNAYGWLKGEQG 186 + L RMY R+ E + + + + E E I A L + P A+ +GE G Sbjct: 156 DTLFRMYQRYCENKGYSARVISYQEAEDRTPGLDGEVPISEAILEVTDPGAFAAFRGEAG 215 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYP------------VVDDSIEIEISESDCRIDTYR 234 +HR+ RI + R HTS ++WV P + + + ++ + + R Sbjct: 216 MHRVQRIPATEKQGRTHTSAVAVWVLPSFPENSTDAENDFNNPESDFYVDPTEVKSEKMR 275 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 ASGAGGQHVN T+SA+R+THIPTG+ V Q RSQ +N+ +AW +LR+++ L ++RE Sbjct: 276 ASGAGGQHVNKTESAIRLTHIPTGIQVSMQDSRSQQQNRERAWRLLRSRIASLRREQREA 335 Query: 295 IANIGES---SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKA 349 A S++++ G +IR+Y Q D R+ ++ + +VL G LD + + Sbjct: 336 QAKDLRDSVLSQSQMSRGDKIRTYNYQ-QDRCTDHRSGLDVHNLPNVLQGGEVLDKVINS 394 Query: 350 TLAI 353 + Sbjct: 395 VQSW 398 >gi|150865313|ref|XP_001384475.2| hypothetical protein PICST_58482 [Scheffersomyces stipitis CBS 6054] gi|149386569|gb|ABN66446.2| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 376 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 100/346 (28%), Positives = 156/346 (45%), Gaps = 21/346 (6%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 + Q + K + + L + +L + ++ L L + Sbjct: 14 EVMKQEFDLVEEKMSSGDF--D----QELSIKFSNLSVILENYEKYTSDLSTFEELKSII 67 Query: 77 LEEDDCSIL-----QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 +E + E + + ++ + Q L + A LE+ G GG+E+ Sbjct: 68 VEPNQDPEFLEEAISEANVTIPHLEKSISTLQSRLLPPMKFSDKPAILEMRPGVGGSEAS 127 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L++MY +A ++K + +G + + I P +Y L+ E GVHR+ Sbjct: 128 LFAGDLMQMYINFANHMRWKYTIVSKSEGNGGFVNEVIMSIDTPGSYNVLRHESGVHRVQ 187 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRIDTYRASGAGGQHVN 244 RI +S R HTS ++I V P + D E + + + RIDT RA G GGQHVN Sbjct: 188 RIPSTESKGRIHTSTAAIVVLPKMSDGNESSLKEDERQFAPGEVRIDTMRAGGKGGQHVN 247 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK- 303 TTDSAVR+ HIPTGV V Q ERSQ KNKA+A+++LRA+L LE K + + Sbjct: 248 TTDSAVRLVHIPTGVTVMQQDERSQPKNKAKAFSILRARLAALERDKEFAEQRKMRTDQV 307 Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMK 348 T +IR+Y P V D R + + G+ L D ++ Sbjct: 308 TTTDRSDKIRTYNY-PQNRVTDHRCGFSLHDLTGCMAGNRLMDIIE 352 >gi|164424709|ref|XP_960901.2| hypothetical protein NCU06721 [Neurospora crassa OR74A] gi|157070629|gb|EAA31665.2| hypothetical protein NCU06721 [Neurospora crassa OR74A] Length = 415 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 93/364 (25%), Positives = 156/364 (42%), Gaps = 36/364 (9%) Query: 18 NAVQRLSFLNTKTE---DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 L + E +P A + + L + + L + LLE Sbjct: 28 KLAAEHKQLTKQLESEYEPTAA---KRAGEISKVVAALQEL----DKAKAALDELNGLLE 80 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 E + + ++ +E+H G GGTE + +A Sbjct: 81 SDDAELRQLANDDLDATKKHLETLGLNLSATLTPKHPFADMPCLIELHPGPGGTEGRHFA 140 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGE--------EAGIKSATLLIKGPNAYGWLKGEQG 186 + L RMY R+ E + + + + E E I A L + P A+ +GE G Sbjct: 141 DTLFRMYQRYCENKGYSARVISYQEAEDRTPGLDGEVPISEAILEVTDPGAFAAFRGEAG 200 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYP------------VVDDSIEIEISESDCRIDTYR 234 +HR+ RI + R HTS ++WV P + + + ++ + + R Sbjct: 201 MHRVQRIPATEKQGRTHTSAVAVWVLPSFPENSTDAENDFNNPESDFYVDPTEVKSEKMR 260 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 ASGAGGQHVN T+SA+R+THIPTG+ V Q RSQ +N+ +AW +LR+++ L ++RE Sbjct: 261 ASGAGGQHVNKTESAIRLTHIPTGIQVSMQDSRSQQQNRERAWRLLRSRIASLRREQREA 320 Query: 295 IANIGES---SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKA 349 A S++++ G +IR+Y Q D R+ ++ + +VL G LD + + Sbjct: 321 QAKDLRDSVLSQSQMSRGDKIRTYNYQ-QDRCTDHRSGLDVHNLPNVLQGGEVLDKVINS 379 Query: 350 TLAI 353 + Sbjct: 380 VQSW 383 >gi|289615662|emb|CBI57583.1| unnamed protein product [Sordaria macrospora] Length = 436 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 90/364 (24%), Positives = 155/364 (42%), Gaps = 36/364 (9%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 L + E + A + + ++ ++E+ L L Sbjct: 49 KLAAEHQQLTKQLE-----SDYEPAAA--KRAGEISKVVAALQELDKAKAALDELHGLLK 101 Query: 78 EED---DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 +D + + ++ +E+H G GGTE + +A Sbjct: 102 SDDAELRQLANDDLDATKKHLETLGTNLSATLTPKHPFADMPCLIELHPGPGGTEGRHFA 161 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGE--------EAGIKSATLLIKGPNAYGWLKGEQG 186 + L RMY ++ E + + L + E E I A L + P A+ +GE G Sbjct: 162 DTLFRMYQKYCENKGYTARVLSYQEAEDRTPGLDGEVPISEAVLEVTDPGAFAAFRGEAG 221 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYP------------VVDDSIEIEISESDCRIDTYR 234 +HR+ RI + R HTS ++WV P + + I ++ + + R Sbjct: 222 MHRVQRIPATEKQGRTHTSAVAVWVLPSFPENSTDAENDFNNPESDFYIDPTEVKSEKMR 281 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 ASGAGGQHVN T+SA+R+THIPTG+ V Q RSQ +N+ +AW +LR+++ L ++R+ Sbjct: 282 ASGAGGQHVNKTESAIRLTHIPTGIQVSMQDSRSQSQNREKAWRLLRSRIASLRREQRDA 341 Query: 295 IANIGES---SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKA 349 A S+ ++ G +IR+Y Q D R+ ++ + +VL G LD + + Sbjct: 342 QAKDLRDSVLSQAQMSRGDKIRTYNYQ-QDRCTDHRSGLDVHNLPNVLQGGEILDKVINS 400 Query: 350 TLAI 353 + Sbjct: 401 VQSW 404 >gi|73946154|ref|XP_541157.2| PREDICTED: similar to mitochondrial translational release factor 1-like [Canis familiaris] Length = 280 Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats. Identities = 101/257 (39%), Positives = 140/257 (54%), Gaps = 9/257 (3%) Query: 99 VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 + S E D ND LEV AG GG E+ + + + MY ++A +++ E LE Sbjct: 11 YLQIILLLVPSEETDKNDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYF 70 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 E G++ A+ I G AY +K E GVHR+ R+ + R HTS ++ + P Sbjct: 71 PSEIGGLRHASASIGGLEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILP-QPTE 129 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 I + I+ D RI T RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+ A Sbjct: 130 INLVINPKDLRIHTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMK 189 Query: 279 MLRAKLYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 LRAKLY + L+ EE + + K ++ G +IR+Y P V D R N Sbjct: 190 KLRAKLYSMYLE--EETSKRYSARKIQVGTKGRSEKIRTYNF-PQNRVTDHRINKSLHDL 246 Query: 336 SDVLDGD--LDDFMKAT 350 + G+ LD+ +++ Sbjct: 247 ETFMQGEYLLDELVQSL 263 >gi|294659861|ref|XP_002770657.1| DEHA2G17204p [Debaryomyces hansenii CBS767] gi|199434289|emb|CAR65990.1| DEHA2G17204p [Debaryomyces hansenii] Length = 411 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 107/345 (31%), Positives = 164/345 (47%), Gaps = 20/345 (5%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 ++ L TK + + + + ++ + + Q + + LLE+ Sbjct: 54 ESMKDEFKILETKISEGSF--D----QETNVKFSNISVILDNYHKYQHEIENLQSLLEIL 107 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQD 132 EE+D ++ E S+ L+ + +V Q L A LE+ G GG+E+ Sbjct: 108 HEEEDAEMVHEASNELKEVIPKVFNFTKVLQSRLLPPVTHSDRPAMLELRPGVGGSEAAL 167 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A LL MY +A K+K + G + A + I P AY L+ E GVHR+ R Sbjct: 168 FAGDLLNMYINFANHMKWKWTMISESHGNNGSVNEAIISIDNPGAYSILRHESGVHRVQR 227 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRIDTYRASGAGGQHVNT 245 I ++ R HTS +++ V P + + E + + RIDT RA G GGQHVNT Sbjct: 228 IPSTETKGRIHTSTAAVVVLPKMSEGTESSLKDDERQFQPGEVRIDTMRAGGKGGQHVNT 287 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-T 304 TDSAVR+THIPTG+ VQ Q ERSQ KNKA+A+++LRA+L LE K + + T Sbjct: 288 TDSAVRLTHIPTGIQVQQQDERSQPKNKAKAFSILRARLAALERDKEIAEQRKLRTDQVT 347 Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMK 348 +IR+Y P V D R ++G L++ ++ Sbjct: 348 TTDRSDKIRTYNY-PQNRVTDHRCGFSLYDIDGCMEGYRLNEIVE 391 >gi|167842465|gb|ACA03160.1| RF2 [Dictyostelium fasciculatum] gi|328868131|gb|EGG16511.1| class I peptide chain release factor [Dictyostelium fasciculatum] Length = 425 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 135/364 (37%), Positives = 206/364 (56%), Gaps = 16/364 (4%) Query: 2 KLSRQLNCL--GGLFDWDNAVQRLSFLNTKTEDPHLWQ----NVIEAKMLMRERQHLDNA 55 ++ R + L G + + RL L D L + + L++E H+ Sbjct: 63 EIRRVIELLLNGTM--YKKMKIRLKEL-QPIHDRSLVDITTIDQNDTGSLLKEYNHIRVQ 119 Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 + I ++ + D L L+++A D ++QE +++ + +F+SL+S + D++ Sbjct: 120 VDQIDQLPVQFKDYLELVKMAKTAGDREMMQEAQSTTEQLMSQCNELEFKSLMSNDMDND 179 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 AY+E+HAGAGGT+S DW ML MY +WA +R F + ++ G+ G K L I GP Sbjct: 180 SAYMEIHAGAGGTDSMDWTQMLSSMYIKWASRRGFDAQIIDESHGDICGYKKVILKISGP 239 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS--ESDCRIDTY 233 AYGW + E GVH+L+R+SP+++N +RHTSF+S++VYP D ++ + D I+T Sbjct: 240 YAYGWTRTENGVHKLIRMSPFNTNGKRHTSFASVFVYPSSDADEKVAVDLVSRDLVIETM 299 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 R+SGAGGQH N T+SAVRITH P+G+ V QERSQHKNK A ++L++KL LEL+KR+ Sbjct: 300 RSSGAGGQHTNKTESAVRITHTPSGLSVNISQERSQHKNKQIAMDLLKSKLLSLELRKRD 359 Query: 294 EIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMK 348 E S + I G G R Y P +KD RT E ++ + L G +LD +K Sbjct: 360 EQEKNLRSEQMGINGFGSGSINRVYTQHPQTRIKDQRTGQESSNFEEFLQGGEELDQMIK 419 Query: 349 ATLA 352 L+ Sbjct: 420 EVLS 423 >gi|190348057|gb|EDK40443.2| hypothetical protein PGUG_04541 [Meyerozyma guilliermondii ATCC 6260] Length = 421 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 100/341 (29%), Positives = 153/341 (44%), Gaps = 20/341 (5%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + S L + + + +L + + + L E+ EE Sbjct: 69 KEYSVLEEAITKGNF--D----QETNVRYSNLSVILDNYHRYVQDMENVAALKEMIAEET 122 Query: 81 DCSILQETSDNLQR----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 D + QE LQ ++ V+ Q L LE+ G GG+E+ + Sbjct: 123 DPEMQQEAIKELQHLVPNVQRSVKVLQARLLPPVSHSDKATILELRPGVGGSEAALFCGD 182 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L+ MY +A +K+K + + + I P +Y L+ E GVHR+ RI Sbjct: 183 LVNMYINFANNKKWKWTKISEGLTNSGSLNEVIMSIDVPGSYNLLRHESGVHRVQRIPAT 242 Query: 197 DSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 ++ R HTS +++ V P + + E + + + RIDT RA G GGQHVNTTDSA Sbjct: 243 ETKGRIHTSTAAVVVLPKISEGTESSLKDDERQFAPGEVRIDTMRAGGKGGQHVNTTDSA 302 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGW 308 VR+THIPTG+ VQ Q ERSQ KNKA+A+++LRA+L LE K + + T Sbjct: 303 VRLTHIPTGIQVQQQDERSQPKNKAKAFSILRARLAALERDKEIAEQRKLRTDQVTTTDR 362 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMK 348 +IR+Y P V D R + G L++ ++ Sbjct: 363 SDKIRTYNF-PQNRVTDHRCGFSLHDIDGCMQGYKLEEIIE 402 >gi|307128661|ref|YP_003880691.1| peptide chain release factor RF2 [Candidatus Sulcia muelleri CARI] gi|306483123|gb|ADM89993.1| peptide chain release factor RF2 [Candidatus Sulcia muelleri CARI] Length = 337 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 110/285 (38%), Positives = 180/285 (63%), Gaps = 7/285 (2%) Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 I+ L D I L + L +IK + + + + + + +A +++ Sbjct: 45 IKKLLYDIKIFLYEIKSLKKRE----LINKLNKIKNFINQIESQIIFTKKEYKLNAIIQI 100 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 GAGGTES DW +ML RMYT WAEK + + L G+ G+K ++G + +G+L Sbjct: 101 TPGAGGTESCDWVSMLYRMYTMWAEKNNYSIKELYNLQGDVGGLKYILFEVQGFSPFGFL 160 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 KGE GVHRLVRISP+D++ R HTSF+S+++YP+++D I+I+I+ SD + T+R+ G+GGQ Sbjct: 161 KGENGVHRLVRISPFDNSKR-HTSFASVYIYPLINDDIKIKINNSDIKWSTFRSGGSGGQ 219 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 +VN ++ VR+ H PT ++++ + RSQ KNK +A +L+++LY +E Q + I + Sbjct: 220 NVNKVETGVRLHHKPTNIIIENTETRSQIKNKTKALKLLKSRLYYIEKQNKNIIRKKNKL 279 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 K I WG QIR+Y++ PY++VKDL+T E ++ + V+DG+L++F Sbjct: 280 KK--IEWGSQIRNYIMHPYKLVKDLKTGYETSNINSVMDGNLNNF 322 >gi|308233416|ref|ZP_07664153.1| peptide chain release factor 1 [Atopobium vaginae DSM 15829] Length = 300 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 103/283 (36%), Positives = 152/283 (53%), Gaps = 10/283 (3%) Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 D + +L A ++ + ++ + N +++ + + + D D +E+ A Sbjct: 2 DDIEAAKEMLHDADADEREMLQEDIAANEEKLPALEDEIKIMLIPGDPNDEKDTIVEIRA 61 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G GG E+ +A L +MY R+AE + +K E L E G K+ + G Y +K Sbjct: 62 GVGGDEAAIFAGDLYKMYERFAESKNWKVEILSSSPSEVGGFKTIEFKMLGEKVYSVMKY 121 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHR+ R+ +S R TS +++ V P D I+I+I +D RIDTY ASG GGQ V Sbjct: 122 ESGVHRVQRVPKTESQGRIQTSTATVAVLP-EADEIDIQIDPTDLRIDTYCASGPGGQCV 180 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NTT SAVRITH+PT VVQ Q +RSQ +N+ MLRA+LYE+EL+K++E G + Sbjct: 181 NTTYSAVRITHLPTNTVVQSQDQRSQIQNREVCMQMLRARLYEMELEKQQEEQ--GAARL 238 Query: 304 TEIG---WGRQIRSYVLQPYQMVKDLRTNIE-KTSPSDVLDGD 342 ++IG +IR+Y QP V D R + VL GD Sbjct: 239 SQIGHGNRSEKIRTYN-QPQDRVTDHRIGFNATYN--GVLLGD 278 >gi|148988472|ref|ZP_01819919.1| peptide chain release factor 1 [Streptococcus pneumoniae SP6-BS73] gi|147926153|gb|EDK77227.1| peptide chain release factor 1 [Streptococcus pneumoniae SP6-BS73] Length = 294 Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 84/255 (32%), Positives = 133/255 (52%), Gaps = 7/255 (2%) Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163 L D + LE+ AGG E+ +A LL MY ++AE + ++ E +E Sbjct: 35 ILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVG 94 Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 G K ++ G + Y LK E G HR+ R+ +S R HTS +++ V P + +E +I Sbjct: 95 GFKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMP-EVEEVEYDI 153 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 D R+D Y ASGAGGQ+VN +AVRI H+PT + V+ Q+ER+Q KN+ +A ++RA+ Sbjct: 154 DPKDLRVDIYHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRAR 213 Query: 284 LYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 + + Q ++ + K+ IG G +IR+Y P V D R + +L Sbjct: 214 VADHFAQIAQDEQD--AERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILS 270 Query: 341 GDLDDFMKATLAIKK 355 G LD+ + A + + Sbjct: 271 GKLDEVVDALVLYDQ 285 >gi|254577375|ref|XP_002494674.1| ZYRO0A07040p [Zygosaccharomyces rouxii] gi|238937563|emb|CAR25741.1| ZYRO0A07040p [Zygosaccharomyces rouxii] Length = 393 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 102/345 (29%), Positives = 158/345 (45%), Gaps = 21/345 (6%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 Q + L+ + + + + S +E Q+ L + L E+ + Sbjct: 45 QEIVQLDQALSKGDGFD-----AETQKTYSRVSSIRSMYEEYQELLDNLKGLQEMIQTDP 99 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTESQDWANMLL 138 ++ + + L LE+ G GGTE+ + LL Sbjct: 100 SLKDDAKSEFDNSLPQFRQVSNNLLRKLLPPHPFAEKACILELRPGVGGTEAMIFTQDLL 159 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 MY +A+ +K + ++ + G+ A L I P AY LK E GVHR+ RI + Sbjct: 160 NMYIGYAQYHHWKYHVIAQNENQSGNGLVDAILSIDEPGAYDKLKYESGVHRVQRIPATE 219 Query: 198 SNSRRHTSFSSIWVYPVVDDSI------EIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 + R HTS +++ V P + +S+ E + RID RA G GGQHVNTTDSAVR Sbjct: 220 TKGRTHTSTAAVIVLPQIVESVKDAEQSERSFRPDEIRIDVMRAGGKGGQHVNTTDSAVR 279 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GW 308 ITH P+G+VV Q ERSQHKNKA+A+ +LRA+L E +++E+ + + K ++ Sbjct: 280 ITHFPSGIVVAMQDERSQHKNKAKAFAVLRARLA--ERERKEKENSERAARKDQVTTTDR 337 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLA 352 +IR+Y P + D R N V G LD+ + + A Sbjct: 338 SDKIRTYNY-PQNRITDHRCNFTLYDIEGVTSGVKLDEVIDSMAA 381 >gi|146415684|ref|XP_001483812.1| hypothetical protein PGUG_04541 [Meyerozyma guilliermondii ATCC 6260] Length = 421 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 100/341 (29%), Positives = 153/341 (44%), Gaps = 20/341 (5%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + S L + + + +L + + + L E+ EE Sbjct: 69 KEYSVLEEAITKGNF--D----QETNVRYSNLSVILDNYHRYVQDMENVAALKEMIAEET 122 Query: 81 DCSILQETSDNLQR----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 D + QE LQ ++ V+ Q L LE+ G GG+E+ + Sbjct: 123 DPEMQQEAIKELQHLVPNVQRSVKVLQARLLPPVSHSDKATILELRPGVGGSEAALFCGD 182 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 L+ MY +A +K+K + + + I P +Y L+ E GVHR+ RI Sbjct: 183 LVNMYINFANNKKWKWTKILEGLTNSGSLNEVIMSIDVPGSYNLLRHESGVHRVQRIPAT 242 Query: 197 DSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 ++ R HTS +++ V P + + E + + + RIDT RA G GGQHVNTTDSA Sbjct: 243 ETKGRIHTSTAAVVVLPKISEGTESSLKDDERQFAPGEVRIDTMRAGGKGGQHVNTTDSA 302 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGW 308 VR+THIPTG+ VQ Q ERSQ KNKA+A+++LRA+L LE K + + T Sbjct: 303 VRLTHIPTGIQVQQQDERSQPKNKAKAFSILRARLAALERDKEIAEQRKLRTDQVTTTDR 362 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMK 348 +IR+Y P V D R + G L++ ++ Sbjct: 363 SDKIRTYNF-PQNRVTDHRCGFSLHDIDGCMQGYKLEEIIE 402 >gi|149409336|ref|XP_001510216.1| PREDICTED: similar to low density lipoprotein receptor-related protein 10 [Ornithorhynchus anatinus] Length = 380 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 108/286 (37%), Positives = 147/286 (51%), Gaps = 9/286 (3%) Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 +L+ EE E + I F + S EAD ND LE+ AG GG E Sbjct: 82 ELLMHDEDEELRKLAESEIITCQKEIAELNRQIVFLLIPSEEADENDLILELTAGIGGQE 141 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + + + MY ++A +K+ E LE E G++ AT I G AY LK E GVHR Sbjct: 142 AMLFTAEMFDMYEQYAAYKKWHFETLEYFPSEIGGLRHATASIGGHEAYKHLKFEGGVHR 201 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ + R HTS ++ V P I + I D RI+T RASGAGGQHVNTTDSA Sbjct: 202 VQRVPKTERQGRTHTSTMTVAVLP-QPTEINLVIHPKDLRIETKRASGAGGQHVNTTDSA 260 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI--- 306 VRI H+PTG+ +CQQERSQ KN+ A LRAKLY ++L+ EE + + K +I Sbjct: 261 VRIVHVPTGIASECQQERSQLKNREMAMKKLRAKLYSIQLE--EETSKRYSARKIQIGTK 318 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKAT 350 G +IR+Y V D R + + G+ LD+ + + Sbjct: 319 GRSEKIRTYNFS-QDRVTDHRISKSFHDIESFMLGERLLDELIHSL 363 >gi|328870409|gb|EGG18783.1| peptide chain release factor 1 [Dictyostelium fasciculatum] Length = 530 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 114/341 (33%), Positives = 177/341 (51%), Gaps = 13/341 (3%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 + L E L E K + +E L ++ K + + + L E+ E Sbjct: 179 ETKFDGLQRLIESQSL--PQSEIKKVSKELDELREQVNSWKVLLVKCQELRELEEMVSEV 236 Query: 80 DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 D + + +L+ + +V+ + L S + D +A +E+ AG GG+E+Q +A Sbjct: 237 KDKEEKELMNQDLKEMVEQVKDSERALVMSLLPSDKDDEGNAIMEIRAGTGGSEAQLFAL 296 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAG---IKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +L MY +A+ +K E LEI + G + A+ I G +G+LK E GVHR+ R Sbjct: 297 EMLGMYEGYAQTMGWKFEVLEIGWTDAVGNKACRDASASISGRGVFGFLKNESGVHRVQR 356 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 I ++ R HTS ++ + P ++I+I +S+ RID YR+SG GGQ VNTTDSAVRI Sbjct: 357 IPETETMGRVHTSTVTVAILP-EPKEVDIKIRDSELRIDVYRSSGNGGQSVNTTDSAVRI 415 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQ 311 TH+PTG VV Q ERSQ N+A+A +LRA+LYE E + + SS+ + + Sbjct: 416 THLPTGTVVAMQDERSQLMNRAKAMKILRARLYEAERSRLHNERSSHRSSQIGDASRSEK 475 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351 IR+Y P V D R NI + V+ G+ L+D ++ + Sbjct: 476 IRTYNF-PQDRVTDHRVNISTNNIESVMAGESLNDLIEEII 515 >gi|224035189|gb|ACN36670.1| unknown [Zea mays] Length = 301 Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats. Identities = 112/299 (37%), Positives = 169/299 (56%), Gaps = 13/299 (4%) Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + ++ + ++ ++ ++ ++ + + +L L EAD D L Sbjct: 2 EGLKSLVANDHEEKDMREMAEEELLVAVEEEKRLQHELFRS-----LLPKDEADEKDCIL 56 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 EV AG GG E+ +A + RMY ++A+K +K + ++I + G K A+ I GP A+G Sbjct: 57 EVRAGTGGEEASLFAMDIFRMYEKYAQKNGWKFDVIDIMESAVKGYKEASGTISGPGAFG 116 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 LK E G+HR+ R+ + + R HTS S+ V P D +++++ D RIDTYR+ G+G Sbjct: 117 KLKFESGIHRVQRVPATEKSGRMHTSAVSVAVLPQ-ADEVDVQLRNEDLRIDTYRSGGSG 175 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVRITHIPTG VV Q ERSQH NKA+A +LRA+LYELE ++ + Sbjct: 176 GQSVNTTDSAVRITHIPTGTVVAIQDERSQHMNKAKALKVLRARLYELERRRLHMDRSKL 235 Query: 300 ESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354 S +IG G +IR+Y P V D R + S +DV++G+ LD F+ A L + Sbjct: 236 RSE--QIGSGDRSERIRTYNF-PQGRVTDHRVGVTHHSIADVMEGESLDMFVDALLLQE 291 >gi|40062727|gb|AAR37632.1| peptide chain release factor 1, degenerate [uncultured marine bacterium 438] Length = 358 Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats. Identities = 104/344 (30%), Positives = 170/344 (49%), Gaps = 14/344 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLIL 72 ++ + + S L + + + +E L+ I + D + Sbjct: 7 IEDLISKHSILEKELSSGEV--DKKLFAEKSKEYSDLNEVIDDARKYFSYEGEKKDLEKI 64 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS--GEADSNDAYLEVHAGAGGTES 130 L + +++ + E +++ E K+ + L EAD +A +E+ AG GG E+ Sbjct: 65 LSDSSSDNEFKEMAEVELKDLKLENETIEKKLKLFLLPKDEADKKNAIIEIRAGTGGLEA 124 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A L +MY + + ++K++ E + + E G+K I+G N Y LK E G Sbjct: 125 SLFAADLFKMYEKVSHQKKWELELISMSQSEAGGLKEVIASIRGKNIYSTLKYESGSSSC 184 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 + S Y ++ T W + ++I+I++SD RID +RA G GGQ VNTTDSAV Sbjct: 185 SKSSRYRNSREEFTLLQQQWAVLPEAEEVDIKINDSDLRIDVFRAGGPGGQSVNTTDSAV 244 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309 RITHIPTG+ V Q ++SQHKNKA+ +LR++LYELE + E E K++IG G Sbjct: 245 RITHIPTGLSVSQQDQKSQHKNKAKGMLILRSRLYELERSRIEGER--SEDRKSKIGTGD 302 Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350 +IR+Y P V D R N+ L+G+ D+ +++ Sbjct: 303 RSERIRTYNF-PQGRVTDHRINLTLHKLEAFLEGEAFDEMVESL 345 >gi|3522941|gb|AAC34223.1| putative peptide chain release factor [Arabidopsis thaliana] Length = 395 Score = 165 bits (418), Expect = 8e-39, Method: Composition-based stats. Identities = 115/379 (30%), Positives = 181/379 (47%), Gaps = 42/379 (11%) Query: 9 CLGGLFD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L + D R + L P + E +E + L +++ I +++ + Sbjct: 8 DLIKIMDQRLSAIEHRNAVLQKLINQPEY--SPEEFSRANKELRKLRDSMLLINDLRAKQ 65 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRI------------------------------K 96 +L + S+++ T + K Sbjct: 66 KVVNLLYRIIYLFQRSSLIRFTFCWQEIDGLKSLVSESSDDKDMLDLAVGELDEAVEEEK 125 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 L EAD D LEV AG GG E+ +A + RMY R+++K+ +K + ++ Sbjct: 126 RLQTLLLKSLLPKDEADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKGWKFDIVD 185 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 I + + G K A+ I G + YG LK E G+HR+ RI + + R HTS S+ + P Sbjct: 186 ITESDMKGYKEASAAICGASVYGKLKFESGIHRVQRIPITEKSGRIHTSAISVAILPQ-A 244 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 D +++++ D RIDTYR+ G+GGQH NTT+SAVRI H+PTG++V Q ERSQH N+A+A Sbjct: 245 DEVDVQLRNEDLRIDTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKA 304 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKT 333 +L A+LYE+E + + + S +IG G + IR+Y P V D R I Sbjct: 305 LKVLCARLYEIERLRIQSSRSKLRSD--QIGSGDRSGRIRTYNF-PQGRVTDHRVGITHH 361 Query: 334 SPSDVLDGD-LDDFMKATL 351 + D++ G+ LD F+ A L Sbjct: 362 AIEDMMQGENLDMFIDALL 380 >gi|299739044|ref|XP_001835016.2| peptide chain release factor 1 [Coprinopsis cinerea okayama7#130] gi|298403596|gb|EAU86782.2| peptide chain release factor 1 [Coprinopsis cinerea okayama7#130] Length = 345 Score = 165 bits (418), Expect = 8e-39, Method: Composition-based stats. Identities = 111/332 (33%), Positives = 173/332 (52%), Gaps = 15/332 (4%) Query: 26 LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85 ++ D +V K + +E + L A KE + L + LL Sbjct: 4 ISEDMSDKD---DVSRLKQV-KESEPLQEAWDQWKETRKLLDETNALLSDPDPSMRAMAS 59 Query: 86 QETSDNLQRIKLEVEYKQ-FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 +E++ ++ VE L A LE+ +G GG+ES +A LLRMY R Sbjct: 60 EESTALNSTLQTLVESTFPSLLLPPSPTAQLSALLELKSGVGGSESSLFAGDLLRMYQRL 119 Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 A +R +K E +D ++ G+K + IKG AY L+ E GVHR+ R+ +S R HT Sbjct: 120 AVQRGWKAEIAAKNDTDDGGVKDVIMEIKGVGAYDALRWESGVHRVQRVPATESKGRVHT 179 Query: 205 SFSSIWVYPVVDDSI---EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 S ++ V P+V+++ E D +I+ RA GAGGQHVN T+SAVR+THIP+G+ V Sbjct: 180 SAVAVLVLPLVEENDTHGEDLFKMEDVKIEVMRARGAGGQHVNRTESAVRLTHIPSGITV 239 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WGRQIRSYVLQ 318 Q ERSQH+N+ +A+ +LR++L L+ + E+A + + + +IR+Y Sbjct: 240 SMQDERSQHQNRRRAFQVLRSRL--LDQKIHREMAERRATRRNLVSGSDRSDKIRTYNF- 296 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKA 349 P + V D R + T+ S VL+G+ L+DF+ A Sbjct: 297 PQERVTDHRIGLTLTNLSSVLEGEGLEDFIDA 328 >gi|215764957|dbj|BAG86654.1| unnamed protein product [Oryza sativa Japonica Group] Length = 314 Score = 165 bits (417), Expect = 9e-39, Method: Composition-based stats. Identities = 114/304 (37%), Positives = 169/304 (55%), Gaps = 10/304 (3%) Query: 54 NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGE 111 + I ++ Q+ + L+ ++EE D + + + + E Sbjct: 2 DMIEELRSKQEEIEGLKSLMTNSVEEKDFREMAAQELLQALEEEKQLQHKLFRSLLPKDE 61 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 AD D LEV AG GG E+ +A + +MY ++++K +K +A++I + G K A+ Sbjct: 62 ADERDCILEVRAGTGGEEASLFAMDIFKMYEKYSQKNGWKFDAIDIMESALKGYKEASGT 121 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231 I GP AYG LK E G+HR+ R+ + + R HTS S+ + P D +++++ D RID Sbjct: 122 ISGPGAYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAILPQ-ADEVDVQLRNEDLRID 180 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 TYR+ G+GGQ VNTTDSAVRITH+PTG VV Q ERSQH+NKA+A +LRA+LYE+E + Sbjct: 181 TYRSGGSGGQSVNTTDSAVRITHVPTGTVVAIQDERSQHQNKAKALKVLRARLYEIERHR 240 Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFM 347 + S +IG G +IR+Y P V D R I S DV++G+ LD F+ Sbjct: 241 LHMDRSKLRSE--QIGSGDRSERIRTYNF-PQGRVTDHRVGITHHSIEDVMEGESLDIFI 297 Query: 348 KATL 351 A L Sbjct: 298 DALL 301 >gi|292620387|ref|XP_002664272.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like [Danio rerio] gi|220679232|emb|CAX12803.1| novel protein similar to H.sapiens MTRF1L, mitochondrial translational release factor 1-like (MTRF1L) [Danio rerio] Length = 431 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 108/304 (35%), Positives = 155/304 (50%), Gaps = 9/304 (2%) Query: 49 RQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL 108 HL + I ++ Q + D LL+ E E L I+ + + Sbjct: 110 LAHLVHNIKKLEVKQKEMEDMQDLLKDNDPELLELAETEKEAVLADIQDLRQKILSLLIP 169 Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 E+D ++ LEV AG GG E+ + + MY +A + + LE + E G++ A Sbjct: 170 EEESDMSELVLEVSAGVGGQEAMLFTAEIFEMYQNYAAFNGWSFDVLEANASELGGVRHA 229 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 + + GP +Y LK E GVHR+ R+ +S R HTS ++ + P I I+ D Sbjct: 230 SASVSGPLSYKKLKFEAGVHRVQRVPKTESKGRTHTSTMTVAILP-QPTEISFTINPKDL 288 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 +I+T RASGAGGQHVNTTDSAVRITH+PTG V +CQQERSQ KNK A +LRAKLY Sbjct: 289 KIETKRASGAGGQHVNTTDSAVRITHLPTGTVAECQQERSQIKNKDTAMKLLRAKLYSAR 348 Query: 289 LQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--L 343 L+ EE + ++ K +I G +IR+Y Q + D R L G+ L Sbjct: 349 LE--EETSRRYQARKLQIGTRGRSEKIRTYNFQ-QDRITDHRIGKTVHDVHGFLQGEELL 405 Query: 344 DDFM 347 ++ + Sbjct: 406 EEMI 409 >gi|266622716|ref|ZP_06115651.1| peptide chain release factor 2 [Clostridium hathewayi DSM 13479] gi|288865539|gb|EFC97837.1| peptide chain release factor 2 [Clostridium hathewayi DSM 13479] Length = 275 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 129/273 (47%), Positives = 194/273 (71%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E+P W++ ++ +++ ++L + ++ K+++ + D +++E+ EE+D S++ E Sbjct: 1 MEEPGFWEDPEKSTKIVQLAKNLKDTVNGYKDLEQQYEDIGVMIEMGNEENDPSVVPEVE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + L+ K ++E + +LLSGE DS++A L ++AGAGGTES DW +ML RMY RWAEK+ Sbjct: 61 EMLKEFKDKLEEIRINTLLSGEYDSDNAILRLNAGAGGTESCDWCSMLYRMYCRWAEKKG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + E L+ DGEEAGIKS T+ I G NA+G+LK E+GVHRLVRISP+++ +R TSF S Sbjct: 121 YSVEVLDYLDGEEAGIKSVTIQINGENAFGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +++ ++++I+E D RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQ Sbjct: 181 DVMPDIEEDLDVDINEEDLRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESS 302 +NK +A ML+AKLY L+ Q+ E + Sbjct: 241 FQNKDKAMQMLKAKLYMLKQQENAEKLSDIRGD 273 >gi|326493842|dbj|BAJ85383.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 236 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 97/213 (45%), Positives = 141/213 (66%), Gaps = 1/213 (0%) Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 RW K+++K+ +E GEEAGIKSAT+ ++G AYG+L GE+G HR+VR SP+++ R Sbjct: 13 RWGGKQRYKSRVVEKSPGEEAGIKSATVELEGRYAYGYLSGEKGTHRIVRQSPFNAKGLR 72 Query: 203 HTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 TSF+ + V P+ ++S+++EI E D I RA G GGQ+VN ++AVR+ HIPTG+ V Sbjct: 73 QTSFAGVEVMPLLPEESLDVEIPEEDLDISFTRAGGKGGQNVNKVETAVRMVHIPTGIAV 132 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321 +C +ERSQ NK +A L+AKL + ++R + WG+QIR+YV PY+ Sbjct: 133 RCAEERSQLANKIKALRRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 192 Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +VKD+RT E + S V+DG+LD F+KA L K Sbjct: 193 LVKDVRTACETSDISGVMDGELDPFIKAYLQYK 225 >gi|50309221|ref|XP_454617.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|1172907|sp|P41767|RF1M_KLULA RecName: Full=Peptide chain release factor 1, mitochondrial; Short=MRF-1; Short=MtRF-1; Flags: Precursor gi|641909|gb|AAB18362.1| peptide termination factor [Kluyveromyces lactis] gi|49643752|emb|CAG99704.1| KLLA0E14807p [Kluyveromyces lactis] Length = 396 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 98/341 (28%), Positives = 151/341 (44%), Gaps = 20/341 (5%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 L L + ++ + + L + + ++ + L E+ + Sbjct: 45 NELRELEDLLSQGGSF-DLEK----QKNFAKLSTIVDSYSKYREEVNQYKELQEILELDP 99 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTESQDWANMLL 138 E L + L + LE+ G GG+E+ + LL Sbjct: 100 SLREEAEADIAALLPDLNKTGDSLLNKLLPPHPFADKPSILELRPGVGGSEAMIFTQDLL 159 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 MY +A K+K + + G+ A L I P +Y LK E GVHR+ R+ + Sbjct: 160 NMYINYANYHKWKWNLISKTENASGSGVLEAILNIDEPGSYDKLKFEAGVHRVQRVPATE 219 Query: 198 SNSRRHTSFSSIWVYPVVDDSIE-----IEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 S R HTS +++ V P + + E + RID RASG GGQHVNTTDSAVR+ Sbjct: 220 SKGRTHTSTAAVIVLPKMGEESESDAYERTFKPDEIRIDVMRASGKGGQHVNTTDSAVRL 279 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WG 309 TH P+G+V+ Q+ERSQH+NKA+A+ +LRA+L E E E+ + K ++ Sbjct: 280 THYPSGIVISMQEERSQHRNKAKAFAILRARLAEKER--LEKEEKERNARKDQVSTTDRS 337 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKA 349 +IR+Y P + D R V+ G+ LDD + A Sbjct: 338 DKIRTYNY-PQNRITDHRCGFTLYDIEGVMKGERLDDVIDA 377 >gi|167842463|gb|ACA03159.1| RF1 [Dictyostelium fasciculatum] Length = 515 Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats. Identities = 114/341 (33%), Positives = 177/341 (51%), Gaps = 13/341 (3%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 + L E L E K + +E L ++ K + + + L E+ E Sbjct: 164 ETKFDGLQRLIESQSL--PQSEIKKVSKELDELREQVNSWKVLLVKCQELRELEEMVSEV 221 Query: 80 DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 D + + +L+ + +V+ + L S + D +A +E+ AG GG+E+Q +A Sbjct: 222 KDKEEKELMNQDLKEMVEQVKDSERALVMSLLPSDKDDEGNAIMEIRAGTGGSEAQLFAL 281 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAG---IKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +L MY +A+ +K E LEI + G + A+ I G +G+LK E GVHR+ R Sbjct: 282 EMLGMYEGYAQTMGWKFEVLEIGWTDAVGNKACRDASASISGRGVFGFLKNESGVHRVQR 341 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 I ++ R HTS ++ + P ++I+I +S+ RID YR+SG GGQ VNTTDSAVRI Sbjct: 342 IPETETMGRVHTSTVTVAILP-EPKEVDIKIRDSELRIDVYRSSGNGGQSVNTTDSAVRI 400 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQ 311 TH+PTG VV Q ERSQ N+A+A +LRA+LYE E + + SS+ + + Sbjct: 401 THLPTGTVVAMQDERSQLMNRAKAMKILRARLYEAERSRLHNERSSHRSSQIGDASRSEK 460 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351 IR+Y P V D R NI + V+ G+ L+D ++ + Sbjct: 461 IRTYNF-PQDRVTDHRVNISTNNIESVMAGESLNDLIEEII 500 >gi|301613862|ref|XP_002936423.1| PREDICTED: peptide chain release factor 1-like, mitochondrial [Xenopus (Silurana) tropicalis] Length = 420 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 103/245 (42%), Positives = 142/245 (57%), Gaps = 9/245 (3%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E++ ND +EV AG GG E+ + + MY +A + + + LE E G++ AT+ Sbjct: 156 ESEDNDLIMEVTAGVGGQEAMLFTAEMFDMYQHYAVHKNWSFDLLEYFSSELGGLRHATV 215 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G +AY LK E GVHR+ R+ + R HTS ++ + P I + I+ D RI Sbjct: 216 SIGGQDAYKCLKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQ-PSEINLVINPKDLRI 274 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 +T RASGAGGQHVNTTDSAVRI HIPTGVV +CQQERSQ KNK +A +LRAKLY ++L+ Sbjct: 275 ETKRASGAGGQHVNTTDSAVRIVHIPTGVVSECQQERSQIKNKEKAMQVLRAKLYTMKLE 334 Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345 EE + + K +I G +IR+Y P V D R + L G+ LDD Sbjct: 335 --EETSKRYNARKIQIGTRGRSEKIRTYNY-PQDRVTDHRIGKSLHNIEGFLFGEELLDD 391 Query: 346 FMKAT 350 +++ Sbjct: 392 LIQSL 396 >gi|302307223|ref|NP_983812.2| ADL284Cp [Ashbya gossypii ATCC 10895] gi|299788896|gb|AAS51636.2| ADL284Cp [Ashbya gossypii ATCC 10895] Length = 397 Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats. Identities = 98/346 (28%), Positives = 154/346 (44%), Gaps = 20/346 (5%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 L L + ++ L + + + QD + L ++ ++ Sbjct: 44 AELETLEKLLSKGESFD-----VEKQKKYSKLSSIVDTFRAYQDNVHMYRELQDMIAQDA 98 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTESQDWANMLL 138 + + L L +E+ G GG E+ + LL Sbjct: 99 SLRTEAQAELDELAPTLARSADTLLDKLLPPHPFAEKPCIVELRPGVGGIEAMIFTQDLL 158 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 MY +A+ ++K + G+ A L I P +Y LK E GVHR+ RI + Sbjct: 159 NMYIGYAQHHRWKWSVTSATENTTGAGLSEAILSIDEPGSYDRLKFESGVHRVQRIPATE 218 Query: 198 SNSRRHTSFSSIWVYPVVDDSIE-----IEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 S R HTS +++ V P + + E + RID RASG GGQHVNTTDSAVRI Sbjct: 219 SKGRTHTSTAAVVVLPKMAEEAESDAYERTFKPGEIRIDVMRASGKGGQHVNTTDSAVRI 278 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WG 309 TH P+G+ + Q+ERSQH+NKA+A+ +LRAKL +LE +E A + K ++ Sbjct: 279 THFPSGIAIHMQEERSQHRNKAKAFQILRAKLADLER--KEREARERSARKDQVSSTDRS 336 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354 +IR+Y P V D R + + ++V+ G+ LD+ + + Sbjct: 337 DKIRTYNF-PQNRVTDHRCAVSLHALAEVVTGERLDELIDSMARYD 381 >gi|145629736|ref|ZP_01785532.1| peptide chain release factor 1 [Haemophilus influenzae 22.1-21] gi|144978073|gb|EDJ87852.1| peptide chain release factor 1 [Haemophilus influenzae 22.1-21] Length = 267 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 93/257 (36%), Positives = 137/257 (53%), Gaps = 1/257 (0%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ +R L D + + + + +E L+ + + L Sbjct: 10 LESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQNIEEAEIL 69 Query: 76 ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q + + I+ + Q L D + YLE+ AG GG E+ +A Sbjct: 70 LDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 129 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE +++ E L ++ E+ G K +L+ G YG LK E G HR+ R+ Sbjct: 130 GDLFRMYSRYAESKRWSMEVLSENESEQGGFKEIIVLVSGEGVYGQLKFESGGHRVQRVP 189 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + +S EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH Sbjct: 190 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 249 Query: 255 IPTGVVVQCQQERSQHK 271 IPTG+VV+CQ ERSQHK Sbjct: 250 IPTGIVVECQDERSQHK 266 >gi|302829783|ref|XP_002946458.1| hypothetical protein VOLCADRAFT_103042 [Volvox carteri f. nagariensis] gi|300268204|gb|EFJ52385.1| hypothetical protein VOLCADRAFT_103042 [Volvox carteri f. nagariensis] Length = 400 Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats. Identities = 106/350 (30%), Positives = 156/350 (44%), Gaps = 40/350 (11%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLE---V 99 + + RE L + + + + L L + D + + + Sbjct: 26 RDVGREYSLLKPLATAYERLLRVRRELEDLAALLKDPDSRVRAMAEEEGRELQQQAAGLT 85 Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159 + D A LE+ AGAGG E+ + LL MY ++A R + + +E+ Sbjct: 86 RRLLLALVPRDPRDGRAALLEMRAGAGGQEAALFCGELLEMYRKFAMSRGWSWQVVELTA 145 Query: 160 GEE-AGIKSATLLIKGPN-------------------------------AYGWLKGEQGV 187 E G+K + YG L E GV Sbjct: 146 SEVPGGVKHVVAAVADGRGAGRRAGEIGDGGEGYDGGEGNGDQDGDAIGVYGTLLPESGV 205 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS ++ V P D +++++ + D RI+T RASGAGGQHVN TD Sbjct: 206 HRVQRVPVTEAQGRVHTSTVAVVVLPQ-ADEVDVKLRDEDLRIETMRASGAGGQHVNVTD 264 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS-KTEI 306 SAVRITH+PTG+VV CQ ERSQH N+A A +LRA+LY+LE+QKR + + S+ Sbjct: 265 SAVRITHVPTGLVVSCQNERSQHLNRAAALKILRARLYDLEMQKRAKEMDEQRSALVASA 324 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAIK 354 +IR+Y P V D RT++ VL G L M A + Sbjct: 325 DRSERIRTYNF-PQGRVTDHRTHLTLHDLDSVLVGGEGLQRLMGVLRAAR 373 >gi|115403013|ref|XP_001217583.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114189429|gb|EAU31129.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 447 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 101/361 (27%), Positives = 156/361 (43%), Gaps = 30/361 (8%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 + L+ K ED + AK + E + + + + + +LE Sbjct: 49 SLAAEHKSLSAKLED-SF--DAKTAKRIG-ELAAITKVLKEWDTANESIAELKSMLEDPD 104 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN--DAYLEVHAGAGGTESQDWAN 135 + + L + L V + L LE+ GAGG E+ +A Sbjct: 105 TDGELRSLAVEDLESSKNNLPVLSDSLKQALVPRHPFAELPCLLEIRPGAGGDEAGLFAF 164 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAG---IKSATLLIKGPNAYGWLKGEQGVHRLVR 192 LLRMYT + +R F++ +++ + AG + A L ++ AY L+ E GVHR+ R Sbjct: 165 ELLRMYTAFCSRRGFRSSVIKLDVADGAGDDRLTEAILEVEANGAYDVLRTESGVHRVQR 224 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVD--------------DSIEIEISESDCRIDTYRASGA 238 + +S R HTS S+ V P + + + + R + RA GA Sbjct: 225 VPATESKGRTHTSAVSVMVLPSFPDSGAGSDSALNVDDPNSDYYVDPQEVRSEKMRAGGA 284 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVN T+SA+R+THIPTG+VV Q RSQH N+ +AW +LRA+L E + RE+ Sbjct: 285 GGQHVNKTESAIRLTHIPTGIVVSMQDSRSQHANRKKAWQILRARLAEARQEAREQELVE 344 Query: 299 GE----SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLA 352 +G G +IR+Y D R+ + VLDG L+ M + Sbjct: 345 LRRGVMGGVARMGRGDKIRTYNYG-QSRCTDHRSGTTIHNLDSVLDGGDGLETVMDSVRT 403 Query: 353 I 353 Sbjct: 404 W 404 >gi|323172435|gb|EFZ58072.1| peptide chain release factor 1 [Escherichia coli LT-68] Length = 227 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 90/219 (41%), Positives = 135/219 (61%), Gaps = 6/219 (2%) Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY+R+AE R+++ E + +GE G K I G YG LK E G HR+ R+ +S Sbjct: 1 MYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQ 60 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS ++ V P + D+ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+ Sbjct: 61 GRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGI 120 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316 VV+CQ ERSQHKNKA+A ++L A+++ E+ KR++ + + +G G + R+Y Sbjct: 121 VVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDRNRTYN 178 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 P V D R N+ +V++G LD ++ + + Sbjct: 179 F-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 216 >gi|322699423|gb|EFY91185.1| putative translation releasing factor RF-1 [Metarhizium acridum CQMa 102] Length = 800 Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats. Identities = 94/368 (25%), Positives = 150/368 (40%), Gaps = 39/368 (10%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 L + +A R L + + Q L L +A Sbjct: 421 KALSAEHEALQKSLNAQ---FDSQKA----RRAGELHRVAAALSAWQQSLSSIRDLQAMA 473 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQD 132 +E D + D LQ + ++ + +E G GG E + Sbjct: 474 DDEQDPDLAAIARDELQAEEAKLGSLEKNLSASLTPRHPFADMPCMIEFRPGPGGLEGRY 533 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAG----------IKSATLLIKGPNAYGWLK 182 + + L +MY +R ++ L+ + AG ++ A L I+ AY + Sbjct: 534 FTDSLFKMYKALCTRRGYRANVLKYEMADAAGDQSSSAGENPVQEAILEIQDQGAYDMFR 593 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD------------DSIEIEISESDCRI 230 E G+HR+ RI +S R HTS ++WV P + ++ + ++ Sbjct: 594 SEAGMHRVQRIPSTESKGRVHTSAVAVWVLPSFPESSSGGEADADDPESDFYVNPQEVKV 653 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 +T RA GAGGQHVN T+SA+R+TH+PTG V Q RSQ +N+ AW +LR+++ + Sbjct: 654 ETMRARGAGGQHVNKTESAIRMTHLPTGTTVSMQDHRSQQRNREDAWKLLRSRIASQRAE 713 Query: 291 KREEIANIGESS---KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345 R A +S +T+I G +IR+Y D R ++ + DVLDG LD Sbjct: 714 LRMHEAARLRNSVLAQTQITRGDKIRTYNYN-QDRCTDHRAGLDVHNLPDVLDGGETLDR 772 Query: 346 FMKATLAI 353 M A Sbjct: 773 VMDAAKEW 780 >gi|326915756|ref|XP_003204179.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like [Meleagris gallopavo] Length = 393 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 107/306 (34%), Positives = 160/306 (52%), Gaps = 9/306 (2%) Query: 50 QHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS 109 L I +++ + L D L ED + + + + E++++ L+ Sbjct: 74 TELAARIQRLRDKERELRDTRELALQDESEDLRKLAEREIVSCEEEIAELKHQIVLLLIP 133 Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169 E ++D +EV AG GG E+ + + + MY R+A +K+K E LE E G++ A Sbjct: 134 SEETNSDLVMEVTAGVGGQEAMLFTSEIFDMYRRYAAYKKWKFEILEYFPSEIGGLRHAV 193 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 I G +AY ++K E GVHR+ R+ + R HTS ++ + P + I+ D R Sbjct: 194 ASIAGLDAYKYMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEMELK-INPKDLR 252 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 I+T RASGAGGQHVNTTDSAVRI HIPTGV +CQQERSQ +NK +A ML AKLY ++L Sbjct: 253 IETKRASGAGGQHVNTTDSAVRIVHIPTGVASECQQERSQIRNKEKAMQMLCAKLYNIKL 312 Query: 290 QKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LD 344 + EE K +I G +IR+Y P + D R + + G+ LD Sbjct: 313 E--EETKKRNSVRKIQIGTKGRSEKIRTYNF-PQDRITDHRISRSVHHIECFMLGEEMLD 369 Query: 345 DFMKAT 350 + ++ Sbjct: 370 EMIQTL 375 >gi|76664975|emb|CAJ17928.1| protein chain release factor 2 [Candidatus Phytoplasma solani] Length = 175 Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats. Identities = 95/165 (57%), Positives = 122/165 (73%), Gaps = 1/165 (0%) Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR+SP+DSN++RHTSF S V P + D I+I + D +ID +R+SGAGGQHVNTTD Sbjct: 1 HRLVRVSPFDSNAKRHTSFVSCDVLPEIKDEIKINVKPEDLKIDVFRSSGAGGQHVNTTD 60 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA-NIGESSKTEI 306 SAVRITH+PTG+VV CQ ERSQ KN+ +A ML+ KL++L L++++E +S + EI Sbjct: 61 SAVRITHLPTGLVVGCQNERSQIKNREKALQMLKTKLFQLALKEQKEETVKQFQSDQKEI 120 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 GWG QIRSYV PY+MVKD RTN E V+DG+LDDF+ L Sbjct: 121 GWGSQIRSYVFHPYKMVKDHRTNQENFQLEQVMDGNLDDFINGYL 165 >gi|94984716|ref|YP_604080.1| peptide chain release factor 1 [Deinococcus geothermalis DSM 11300] gi|119361533|sp|Q1J0S3|RF1_DEIGD RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|94554997|gb|ABF44911.1| peptide chain release factor 1 [Deinococcus geothermalis DSM 11300] Length = 370 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 102/349 (29%), Positives = 154/349 (44%), Gaps = 13/349 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + DP + + E L R + L ++ +E D EL Sbjct: 6 LEELAAEFGLVERALGDPAMLADPREYARLTRRHRELTPIVTLYREHAVLSSDLEGAREL 65 Query: 76 ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D E R+ + L + D+ + LE+ AGAGG E+ +A Sbjct: 66 LADPDMRELAQGEIESLSARLAQIEAELEVLLLPTDPDDAKNVILELRAGAGGAEAALFA 125 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LLRMYTR+AE K L+ + + G + G A+ K E+GVHR+ R+ Sbjct: 126 VDLLRMYTRYAEGAGLKLNVLDASESDLGGASKVVAEVTGEFAFRAFKWERGVHRVQRVP 185 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + + S+ RID +R+ GAGGQ VNTTDSAVR + Sbjct: 186 ATESQGRIHTSTVTVAVLPEAEQGEVS-VDPSEVRIDVFRSQGAGGQGVNTTDSAVRAVY 244 Query: 255 IP---TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 P +VV CQ RSQ KN+ +A +L ++L E E REE + ++G G + Sbjct: 245 RPGTPDEIVVVCQDSRSQIKNREKALVVLASRLAERERAAREERERETRA--AQVGTGER 302 Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTS--PSDVLDGDLDDFMKATLAIKK 355 IR+Y P V D R + + V+ G L + A ++ Sbjct: 303 SEKIRTYNY-PQNRVTDHRLEGDAKNFALDSVMAGGLAPIVAALSRDER 350 >gi|50730809|ref|XP_417026.1| PREDICTED: hypothetical protein [Gallus gallus] Length = 455 Score = 162 bits (410), Expect = 7e-38, Method: Composition-based stats. Identities = 101/352 (28%), Positives = 157/352 (44%), Gaps = 21/352 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + ++ +N E + L R R L + +EI++ + L + Sbjct: 86 LETLSKEYQQVDHLLNADS--KNEFEQRTLRRRRADLSPVATAFQEIREAESELQELETM 143 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-------LSGEADSNDAYLEVHAG--AG 126 E D Q L+ + + + D + LEV AG G Sbjct: 144 CRELDSRDEKQLLELALEEKETLDKKINTLCRKLFQLLVPKEKYDKSHVILEVTAGRTTG 203 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G Q + + MY +A+ + + + L E G+ A I G + Y LK E G Sbjct: 204 GDICQQFTKEMFEMYQNYADYKCWTFDILNYVPAEIGGLHHAAAHISGDDVYRHLKYEGG 263 Query: 187 VHRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 HR+ RI +SR + + + + +++++ D RIDT+RA GAGGQHVN Sbjct: 264 THRVQRIPETGLSSRMQRIHTGTMSVIVLPQPEEVDVKVDPKDLRIDTFRAKGAGGQHVN 323 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TDSAVRI H+PTGVVV+CQQERSQ NK A LRAKLY+ ++K+ + K Sbjct: 324 KTDSAVRIVHLPTGVVVECQQERSQQMNKEIALRTLRAKLYQQIIEKQLSQEQ--SARKL 381 Query: 305 EIGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351 ++G +IR+Y V D R + + + ++L G +LD + L Sbjct: 382 QLGTRAQSERIRTYNF-TQDRVTDHRISYDARNIKEILSGKEELDKLINRLL 432 >gi|118088382|ref|XP_419682.2| PREDICTED: similar to Mitochondrial translational release factor 1-like [Gallus gallus] Length = 394 Score = 162 bits (409), Expect = 8e-38, Method: Composition-based stats. Identities = 109/316 (34%), Positives = 162/316 (51%), Gaps = 10/316 (3%) Query: 41 EAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK-LEV 99 +A++ + L I +++ + L D L ED + + + + Sbjct: 65 KARVQGEAKPELAARIQRLRDKERELQDTRELALQDESEDLRKLAEREIVSCEEEIAELK 124 Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159 + S E D++D +EV AG GG E+ + + + MY R+A +K+K E LE Sbjct: 125 HQIVLLLIPSEETDNSDLVMEVTAGVGGQEAMLFTSEIFDMYRRYAAYKKWKFEILEYFP 184 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 E G++ A I G +AY ++K E GVHR+ R+ + R HTS ++ + P + Sbjct: 185 SEIGGLRHAVASIAGLDAYKYMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEME 244 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 I+ D RI+T RASGAGGQHVNTTDSAVRI HIPTGV +CQQERSQ +NK +A M Sbjct: 245 LK-INPKDLRIETKRASGAGGQHVNTTDSAVRIVHIPTGVTSECQQERSQIRNKEKAMQM 303 Query: 280 LRAKLYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336 L AKLY ++L+ EE + K +I G +IR+Y P + D R + Sbjct: 304 LCAKLYNIKLE--EENKKRNSARKIQIGTKGRSEKIRTYNF-PQDRITDHRISRSVHHTE 360 Query: 337 DVLDGD--LDDFMKAT 350 + G+ LD+ +K Sbjct: 361 CFMLGEEMLDEMIKTL 376 >gi|156055958|ref|XP_001593903.1| hypothetical protein SS1G_05331 [Sclerotinia sclerotiorum 1980] gi|154703115|gb|EDO02854.1| hypothetical protein SS1G_05331 [Sclerotinia sclerotiorum 1980 UF-70] Length = 490 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 94/342 (27%), Positives = 156/342 (45%), Gaps = 33/342 (9%) Query: 44 MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL-----QRIKLE 98 + + L + + +K+ ++ L L + L+E + ++ Sbjct: 130 KVAKRIGELQDVATALKKWEETKESLSELDALLQDSSTDEELRELAVEDLTTTTAHLEEL 189 Query: 99 VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 +E+ GAGG E+ +A LLRMY + +++F++ ++ Sbjct: 190 SRNLTTSLTPKHPFAELPCLVEIRPGAGGGEAAIFAADLLRMYRAYCARKRFRSTIIKYE 249 Query: 159 DGEEAG------IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 + G I L I+ P +Y L+GE GVHR+ R+ + R HTS S+ V Sbjct: 250 TADGEGAGSDSPISEVVLEIETPGSYDSLRGEAGVHRVQRVPATEKQGRTHTSAVSVMVL 309 Query: 213 PVVD----------------DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 P + + ++ +D R D RA GAGGQHVNTTDSAVR+TH+P Sbjct: 310 PSFPTTGQEGQEYWEADLNDPNSDYYVNPADVRTDVMRARGAGGQHVNTTDSAVRLTHVP 369 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS---KTEIGWGRQIR 313 T VV Q+ RSQ +N+ +AW +LR++L + + REE S ++G G +IR Sbjct: 370 TNTVVSMQEGRSQLQNRQKAWQVLRSRLAAAKREAREEQLINLRRSVIGVAKMGRGDKIR 429 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353 +Y Q V D R+ + + DV++G +L+ + + A Sbjct: 430 TYNWG-QQRVTDHRSGLSVHNLDDVMEGGDELEKVIDSVKAW 470 >gi|229032803|ref|ZP_04188759.1| Peptide chain release factor 2 [Bacillus cereus AH1271] gi|228728476|gb|EEL79496.1| Peptide chain release factor 2 [Bacillus cereus AH1271] Length = 272 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 138/269 (51%), Positives = 179/269 (66%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 W + A+ ++ E L + +++ + + I EL EE D + +E Sbjct: 1 MMGAGFWDDQQGAQAVINEANALKEMVGKFRQLDETFENLEITHELLKEEYDEDLHEELE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 ++ + E+ + + LLS D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR Sbjct: 61 SEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FK E ++ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180 Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269 V P +D +EIEI D +IDTYRASGAGGQH+NTTDSAVRITH PT VV CQ ERSQ Sbjct: 181 EVVPEFNDEVEIEIRSEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQ 240 Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANI 298 KN+ A ML+AKLY+ +L++++ + Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAELDE 269 >gi|330919897|ref|XP_003298803.1| hypothetical protein PTT_09620 [Pyrenophora teres f. teres 0-1] gi|311327840|gb|EFQ93110.1| hypothetical protein PTT_09620 [Pyrenophora teres f. teres 0-1] Length = 416 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 103/359 (28%), Positives = 165/359 (45%), Gaps = 28/359 (7%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 L K + + AK L E + +A+ + + + + ++ + Sbjct: 46 AITSEHKELTEKLAN-GF--DTRAAKKLG-EYSPIVSALGEWDKANESVTELTSMIHDST 101 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND--AYLEVHAGAGGTESQDWAN 135 + + L R +L + + L LE+ GAGG+E+ +A Sbjct: 102 TDPELRSLASDDLEETRTQLVNASQSLITSLVPVHPFAHLPCLLEIRPGAGGSEAAIFAG 161 Query: 136 MLLRMYTRWAEKRKFKTE---ALEIHDGEEAGI--KSATLLIKGPNAYGWLKGEQGVHRL 190 L RMY+ + + F+T I+ EAG+ A + ++ NAYG + E GVHR+ Sbjct: 162 DLFRMYSAFCNRNGFRTNLIKYENINGTSEAGVPLSEAIMEVENENAYGVFRCEAGVHRV 221 Query: 191 VRISPYDSNSRRHTSFSSIWVYP-----------VVDDSIEIEISESDCRIDTYRASGAG 239 R+ ++ R HTS +S+ V P + + I + +++ RASGAG Sbjct: 222 QRVPATETKGRTHTSAASVHVLPSLQENSAEEQDFDNPESDYYIDPKEVKLEVMRASGAG 281 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQHVN T+SAVR+THIPT VV Q RSQHKNK +AW +LRA++ + +KREE Sbjct: 282 GQHVNKTESAVRLTHIPTNTVVAMQDSRSQHKNKEKAWALLRARIAQTRREKREEEMANM 341 Query: 300 ESS---KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATLAI 353 S ++G G ++R+Y Q V D R+ + DV+ G LD M++ + Sbjct: 342 RRSVIGVAKMGRGDKVRTYNWG-QQRVTDHRSGMTVHDLDDVMGGGQTLDKVMESVRSW 399 >gi|47218188|emb|CAF97052.1| unnamed protein product [Tetraodon nigroviridis] Length = 409 Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats. Identities = 108/305 (35%), Positives = 156/305 (51%), Gaps = 12/305 (3%) Query: 50 QHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL---QETSDNLQRIKLEVEYKQFES 106 L I I+E++ + + + L +ED E + ++ I+ + Sbjct: 89 SLLAPLIRSIRELETKQMEMVETETLLEDEDPALRELAETERENCVKDIQDLSKKILDLL 148 Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + EAD N+ LEV AG GG E+ + + MY +A+ + + LE + G++ Sbjct: 149 IPEEEADLNELVLEVTAGVGGQEAMLFTAEVFDMYQGYAQHHGWSFDTLEYMTSDLGGLR 208 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 A+ I G Y +K E GVHR+ R+ + R HTS ++ V P I I++ Sbjct: 209 HASASISGRLCYKKMKFEGGVHRVQRVPKTEKQGRMHTSTMTVAVLP-QPTEISFTINQK 267 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+ +A LRAKLY Sbjct: 268 DLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVAECQQERSQLKNREKAMKALRAKLYS 327 Query: 287 LELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD- 342 L+L+ EE + K +I G +IR+Y + D R + + L G+ Sbjct: 328 LKLE--EETSKRYNQRKIQIGTKGRSEKIRTYNFA-QDRITDHRIGMTLHDIKNFLLGED 384 Query: 343 -LDDF 346 LD+ Sbjct: 385 LLDEM 389 >gi|39961534|ref|XP_364694.1| hypothetical protein MGG_09539 [Magnaporthe oryzae 70-15] gi|145011042|gb|EDJ95698.1| hypothetical protein MGG_09539 [Magnaporthe oryzae 70-15] Length = 425 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 92/364 (25%), Positives = 165/364 (45%), Gaps = 32/364 (8%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 N L+T+ E + + +AK M E + +A+ Q + + L + Sbjct: 36 NLTDEHDQLHTELEA-NF--DSTKAKR-MGEISKVADALKAWDAAQASINELTGLSKSQD 91 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 EE +E + + + +E G GG E + + + L Sbjct: 92 EEMRELAKEELETTNNELGTLSDKIKIALTPKHPFADMPCLIEFRPGPGGMEGRLFTDAL 151 Query: 138 LRMYTRWAEKRKFKTEALEIH-------DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +MY + + ++T+ + E ++ A L + P +Y +GE G+HR+ Sbjct: 152 FKMYQSYCTFKGYRTKTVTYERVDGPPGADGETPLQEAILEVINPGSYDIFRGEAGMHRV 211 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVD---------------DSIEIEISESDCRIDTYRA 235 R+ + + R HTS +++WV P + + I ++ R++T RA Sbjct: 212 QRVPATEKSGRIHTSAAAVWVLPSFPEEAGASDEGTTDVNDPNSDFYIDPTEVRVETMRA 271 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 GAGGQHVN T+SA+R+TH+PTG +V Q ERSQ +N+ AW +LR+++ + ++REE+ Sbjct: 272 RGAGGQHVNKTESAIRLTHMPTGTMVSMQDERSQQRNREAAWKVLRSRIAQKRREQREEM 331 Query: 296 ANIGES---SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKAT 350 A S SK +I G +IR+Y + D R+ ++ + V+ G +LD + + Sbjct: 332 AQNLRSSVLSKDKITRGEKIRTYNYV-QKRCTDHRSGLDIHNLPGVMMGGPELDRIIASV 390 Query: 351 LAIK 354 + Sbjct: 391 HEWQ 394 >gi|170114318|ref|XP_001888356.1| predicted protein [Laccaria bicolor S238N-H82] gi|164636668|gb|EDR00961.1| predicted protein [Laccaria bicolor S238N-H82] Length = 338 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 105/326 (32%), Positives = 164/326 (50%), Gaps = 11/326 (3%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 P +V+ K L +E + L A + + L + LL+ + E + Sbjct: 1 MSSPE---DVLRLKQL-KESKALQTAWDEWTQTRQLLDNTAPLLDDPDPTMRSLAVDEYT 56 Query: 90 DNLQRIKLEVEYKQ-FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + +E + A +E+ +G GG+ES + LLRMY R A Sbjct: 57 SLTSTLTQFLESTFPSLLVPPSTTSHLSALMEMKSGVGGSESSLFLGDLLRMYQRLANVN 116 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 ++K + + +D + G K A + IKG AY L+ E GVHR+ R+ +S+ R HTS S Sbjct: 117 RWKAQVVAQNDNDGGGTKDAIIEIKGDGAYDALRFESGVHRVQRVPATESSGRVHTSTVS 176 Query: 209 IWVYPVVDDSIEIE---ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 I V P+V+++ S SD +++ RA GAGGQHVN T+SAVR+THIPTG+ V Q Sbjct: 177 IVVLPLVEETDTQAEELFSMSDIKLEVMRARGAGGQHVNKTESAVRLTHIPTGITVSMQD 236 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVK 324 ERSQH+N+ +A+ +LR++L + +L + E + +IR+Y + V Sbjct: 237 ERSQHQNRRRAFQVLRSRLLDKKLTREMEERRDTRRNLVRGADRSEKIRTYNFV-QERVT 295 Query: 325 DLRTNIEKTSPSDVLDGD-LDDFMKA 349 D R + + S VL+GD + DF+ A Sbjct: 296 DHRIGLTLMNLSSVLEGDGIQDFIDA 321 >gi|218459801|ref|ZP_03499892.1| peptide chain release factor 1 [Rhizobium etli Kim 5] Length = 230 Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats. Identities = 89/221 (40%), Positives = 133/221 (60%), Gaps = 8/221 (3%) Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R+A ++ +K E L +GE G K I G + LK E GVHR+ R+ Sbjct: 1 GDLFRMYERFASEKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQRVP 60 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS +++ V P + I+IEI D RIDT R+SGAGGQHVNTTDSAVRITH Sbjct: 61 ETEAGGRIHTSAATVAVLP-EAEEIDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVRITH 119 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311 +P+G+VV E+SQH+N+A+A +LR++LY+ E Q+ + K+++G G + Sbjct: 120 LPSGIVVTSS-EKSQHQNRAKAMQVLRSRLYDAERQR--ADSERSADRKSQVGSGDRSER 176 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IR+Y P V D R N+ +++G++++ + A +A Sbjct: 177 IRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVDALMA 216 >gi|326914097|ref|XP_003203364.1| PREDICTED: peptide chain release factor 1, mitochondrial-like [Meleagris gallopavo] Length = 455 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 100/352 (28%), Positives = 156/352 (44%), Gaps = 21/352 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + +N+ +N E + L R L + +EI++ + L + Sbjct: 86 LETLSKEYQQVNSLLNADS--KNEFEQRTLRRRSADLSPVATAFQEIKEAEGELRELETM 143 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-------LSGEADSNDAYLEVHAG--AG 126 E Q L+ + + + D + LEV AG G Sbjct: 144 CRELGSREEKQLLELALEEKETLNKKINTLCRKLFQLLVPKEKYDKSHVILEVTAGRTTG 203 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G Q + + MY +A+ + + + L E G+ A I G + Y LK E G Sbjct: 204 GDICQQFTKEMFEMYQNYADYKCWTFDILNYVPAEIGGLHHAAAHISGDDVYRHLKYEGG 263 Query: 187 VHRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 HR+ RI +SR + + + + +++++ D RIDT+RA GAGGQHVN Sbjct: 264 THRVQRIPETGLSSRMQRIHTGTMSVIVLPQPEEVDVKVDPKDLRIDTFRAKGAGGQHVN 323 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TDSAVRI H+PTGVVV+CQQERSQ NK A LRAKLY+ ++K+ + K Sbjct: 324 KTDSAVRIVHLPTGVVVECQQERSQQMNKEIALRTLRAKLYQQIIEKQLSQEQ--SARKL 381 Query: 305 EIGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351 ++G +IR+Y V D R + + + ++L G +LD + L Sbjct: 382 QLGTRAQSERIRTYNF-TQDRVTDHRISYDARNIKEILSGKEELDKLINRLL 432 >gi|289678406|ref|ZP_06499296.1| peptide chain release factor 1 [Pseudomonas syringae pv. syringae FF5] Length = 219 Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats. Identities = 91/213 (42%), Positives = 127/213 (59%), Gaps = 6/213 (2%) Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E+R + E L ++GE G K ++G + YG LK E G HR+ R+ +S R HTS Sbjct: 1 ERRGGRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQRVPETESQGRIHTS 60 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 ++ V P D+ IEI+ +D R+DTYR+SGAGGQHVN TDSA+RITH+P+G+VV+CQ+ Sbjct: 61 ACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRITHLPSGIVVECQE 120 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQM 322 ERSQHKN+A+A + L AKL + Q I K +G G +IR+Y P Sbjct: 121 ERSQHKNRARAMSWLSAKLND--QQTSAAANAIASERKLLVGSGDRSERIRTYNF-PQGR 177 Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 V D R N+ S +VL G +D ++ LA + Sbjct: 178 VTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQ 210 >gi|295099339|emb|CBK88428.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium cylindroides T2-87] Length = 316 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 100/299 (33%), Positives = 150/299 (50%), Gaps = 6/299 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ V+R + +N + + + L RE+ L + E + + L Sbjct: 8 LDSLVERYNEINELMMSSSVVSDRKQMAKLGREQNELTPIVETYAEYKQAKEEFEEAKTL 67 Query: 76 ALEEDDCSI---LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E+D E IK ++ + + DS++A++E+ AGG E+ Sbjct: 68 QKEDDKELRELANAEIERLEPAIKEYLDRLELLLVPKDPNDSHNAFMEIRGAAGGDEANI 127 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY ++AE + +K E + D E G T + G NAYG LK E G HR+ R Sbjct: 128 FAGDLFRMYAKYAESKGWKVEVTDSEDSEAGGFSLITFKVTGQNAYGTLKFESGSHRVQR 187 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R TS +++ YP D + +I +D I+ RASGAGGQHVN TDSAVRI Sbjct: 188 VPKTESQGRIQTSTATVLCYP-ELDEEDFDIDMNDLEIEAMRASGAGGQHVNKTDSAVRI 246 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 H PTG+VV+CQ RSQH+N+A A + A++ E +RE G +T+IG G + Sbjct: 247 VHKPTGIVVKCQDGRSQHENRATALATIAARV--KEEHQRELDEKAGAERRTKIGTGDR 303 >gi|325973695|ref|YP_004250759.1| peptide chain release factor 1 [Mycoplasma suis str. Illinois] gi|325990139|ref|YP_004249838.1| peptide chain release factor 1 [Mycoplasma suis KI3806] gi|323575224|emb|CBZ40889.1| Peptide chain release factor 1 [Mycoplasma suis] gi|323652297|gb|ADX98379.1| peptide chain release factor 1 [Mycoplasma suis str. Illinois] Length = 359 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 101/334 (30%), Positives = 164/334 (49%), Gaps = 17/334 (5%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 Q++ D +N+ L +E I + + D E + Sbjct: 17 KQKILE-EKLLSDSANIKNIA----LQKEISKNRELIEKFSSYKKYISDYEECKESISKG 71 Query: 80 DDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQDWAN 135 D + + ++ ++E + E S + D + +E+H+ AGG E+ + + Sbjct: 72 KDAEFKSLLEEECRLLEKKIEQLEQELKSDLFPSNKYDGKNIVIEMHSAAGGEEAAIFVS 131 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 L Y ++A + K+K +++ + E G+ T + G Y +K E GVHR+ R+ Sbjct: 132 NLFDSYKKYANENKWKLNVVDLRESER-GLAFITFTLSGSKVYSKMKYESGVHRVQRVPE 190 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +S R HTS ++ V P D IEI++ SD RID YRASGAGGQHVN T+SAVR+ HI Sbjct: 191 TESKGRVHTSTITVSVLP-EADEIEIQLDPSDIRIDVYRASGAGGQHVNKTESAVRLVHI 249 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---I 312 PT ++V CQQERSQ NK A+ +L+ KL+ E +K+ + + K +IG G + I Sbjct: 250 PTNIMVACQQERSQMLNKEIAFKILKTKLW--EREKKLQKEEFFSNLKQQIGKGERAEKI 307 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 R+Y P + D R + + + V++G + Sbjct: 308 RTYNY-PQNRITDHRILLTINNLTSVMEGHFEQI 340 >gi|295698659|ref|YP_003603314.1| peptide chain release factor 1 [Candidatus Riesia pediculicola USDA] gi|291157243|gb|ADD79688.1| peptide chain release factor 1 [Candidatus Riesia pediculicola USDA] Length = 346 Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats. Identities = 121/343 (35%), Positives = 186/343 (54%), Gaps = 10/343 (2%) Query: 11 GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 +F+ + ++ + + N L RE L IS K+I+ + Sbjct: 3 KSIFEEYQKIKKKFKTIQKNFLNKSSIYNSKSRPSLQREYTKLFKIISNFKKIESIRKEI 62 Query: 70 LILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGT 128 + +L L+E+ S+ E + L +K +VE + + + + D D +LE+ AG GG+ Sbjct: 63 EEIKKLILDEELKSLALEELNKLINLKKKVENRLRNQLTPKDQNDRKDCFLEIKAGTGGS 122 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGV 187 E+ +A L RMY ++AE +K E + I++ E G K I G Y LK E G Sbjct: 123 EAAIFAKDLFRMYCKYAESCSWKVEIISINEIESGSGYKEIIAKISGKEVYRKLKFESGG 182 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ RI +S R HTS + + VD S I+++D RIDT+R+SGAGGQHVNTT+ Sbjct: 183 HRVQRIPETESRGRIHTSSCKVAILLKVDASEIK-INQNDIRIDTFRSSGAGGQHVNTTN 241 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SA+R+THIPTG+ V+CQ ERSQHKN+A+A ++L A+L LEL+K + + + K G Sbjct: 242 SAIRVTHIPTGISVECQDERSQHKNRAKAMSVLLARLKNLELKKVAQEKSYKK--KFLFG 299 Query: 308 WGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347 G +IR+Y Q +V D RTN ++V++G L+ + Sbjct: 300 SGERSDRIRTYNFQRGTIV-DHRTNSVTYQINEVMNGKLEILI 341 >gi|323249834|gb|EGA33733.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] Length = 281 Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats. Identities = 98/272 (36%), Positives = 149/272 (54%), Gaps = 1/272 (0%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE ++ + + Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESRRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 +PTG+VV+CQ ERSQHKNKA+A ++L A+++ Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHA 280 >gi|301617313|ref|XP_002938091.1| PREDICTED: LOW QUALITY PROTEIN: peptide chain release factor 1, mitochondrial-like [Xenopus (Silurana) tropicalis] Length = 446 Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats. Identities = 103/351 (29%), Positives = 158/351 (45%), Gaps = 21/351 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + + L + ++ + R L I +++I++ D L + Sbjct: 79 LQSLSKEHERLTEMLGQTSVREDDRRSA--SRRHSELSRLIGLLRDIKETEQDVRELELM 136 Query: 76 ALEEDDCSILQE-------TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG--AG 126 ++ Q + Q I L + D NDA LEV +G G Sbjct: 137 CAGKNXLEEGQMLALALEEKNTLKQNINKLRGKLLQALLPHEKYDMNDAVLEVTSGRTTG 196 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G Q + + MY +A + + E L E G+ A I G Y LK E G Sbjct: 197 GDICQQFTKEIFDMYQNYAYYKSWSFEILNYSPAEYGGLHHAAARISGEGVYKRLKYEGG 256 Query: 187 VHRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 HR+ RI +SR + + + D +E++I D RIDT+R+ GAGGQHVN Sbjct: 257 THRVQRIPEVGLSSRMQRIHTGTMTVIVLPQPDEVEVKIDSKDLRIDTFRSKGAGGQHVN 316 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVRI HIPTG+ V+CQQERSQ NK +A +LR +LYE +++ E+ + K Sbjct: 317 TTDSAVRIVHIPTGIAVECQQERSQIANKEKALRILRMRLYEQTVEQ--ELLERRSARKL 374 Query: 305 EIGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKAT 350 ++G +IR+Y + D R + E + + L+G+ LDD ++ Sbjct: 375 QVGTRAQSERIRTYNF-TQDRLTDHRIHYEVRNIKEFLNGEELLDDLIQKL 424 >gi|327262069|ref|XP_003215848.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like [Anolis carolinensis] Length = 394 Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats. Identities = 103/294 (35%), Positives = 153/294 (52%), Gaps = 10/294 (3%) Query: 63 QDRLCDNLILLELALEEDDCSILQETS-DNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ L D L ED + + + I + S E D +D +EV Sbjct: 83 EEELGDTERLAREDENEDLRKLAETEIVFCQEEIAELKRQIMLHLIPSEETDESDLIMEV 142 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +G GG E+ + + MY ++A + + + LE + G++ A+ I G AY + Sbjct: 143 TSGVGGQEAMLFTAEMFDMYQQYAAYKNWNFDILEYAPSDIGGLRYASAAIAGHEAYRQM 202 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K E GVHR+ R+ + R HTS ++ + P + I + I+ + RI+T RASGAGGQ Sbjct: 203 KFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQ-PNEINLTINPKELRIETKRASGAGGQ 261 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVRI HIPTGVV +CQQERSQ KNKA+A +LRAKLY ++L+ +E + Sbjct: 262 HVNTTDSAVRILHIPTGVVSECQQERSQIKNKAKAIQILRAKLYNMKLE--DESRKRETA 319 Query: 302 SKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKAT 350 K + G +IR+Y P V D R + + G+ LD+ ++A Sbjct: 320 RKIQTGTKGRSEKIRTYNF-PQDRVTDHRISRSVHHIEQFMLGEELLDEMIQAL 372 >gi|224043444|ref|XP_002196330.1| PREDICTED: mitochondrial translational release factor 1 [Taeniopygia guttata] Length = 418 Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats. Identities = 96/352 (27%), Positives = 156/352 (44%), Gaps = 21/352 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ + ++ + L + + + L R L + +EI++ + L + Sbjct: 50 LESLSKEYQQVSHQLSAHSL-NDFEQ-RTLRRRCADLSPIAAAFQEIKEAEREVQELEAM 107 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-------LSGEADSNDAYLEVHAG--AG 126 E D Q L+ + + + D + LEV AG G Sbjct: 108 CTELDSRDEKQLLELALEEKESLDKKMNMLCRKLFQLLVPKEKYDRSSVILEVTAGRTTG 167 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G Q + + MY +A+ +++ + + E G+ A I G N Y LK E G Sbjct: 168 GDICQQFTKEMFDMYQSYADYKRWTFDIVNYTPAEIGGLHHAAAHISGENVYRHLKYEGG 227 Query: 187 VHRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 HR+ RI +SR + + + + +++++ D RIDT+RA GAG QHVN Sbjct: 228 THRVQRIPETGMSSRMQRIHTGTMSVIVLPQPEEVDVKVDPKDLRIDTFRAKGAGEQHVN 287 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TDSAVRI H+PTG+ V+CQQERSQ NK A LRAKLY+ ++K+ + K Sbjct: 288 KTDSAVRIVHLPTGLAVECQQERSQQLNKEIALRTLRAKLYQQLVEKQLSQEQ--SARKL 345 Query: 305 EIGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351 ++G +IR+Y V D R + + + ++L G LD + L Sbjct: 346 QLGTRAQSERIRTYNF-TQDRVTDHRISYDARNIKEILSGKEALDKLINRLL 396 >gi|315304796|ref|ZP_07874958.1| peptide chain release factor 1 [Listeria ivanovii FSL F6-596] gi|313626836|gb|EFR95807.1| peptide chain release factor 1 [Listeria ivanovii FSL F6-596] Length = 229 Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats. Identities = 81/222 (36%), Positives = 129/222 (58%), Gaps = 7/222 (3%) Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 + RMY+++AE R +K E ++ + G K ++ G +A+ +K E G HR+ R+ Sbjct: 1 MFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQRVPET 60 Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +S R HTS +++ + P + +EIE+ + D R DT+ ++GAGGQ VNTT SAVR+THIP Sbjct: 61 ESGGRIHTSTATVAILP-EAEEVEIELHDKDIRTDTFASTGAGGQSVNTTMSAVRLTHIP 119 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313 TG+VV Q ERSQ KNK +A +LRA++Y+ +RE + K+ +G G +IR Sbjct: 120 TGIVVSMQDERSQLKNKDKAMKVLRARVYDKF--EREAREEYDANRKSAVGTGDRSERIR 177 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +Y P V D R + +++G LD+ + A + + Sbjct: 178 TYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQ 218 >gi|66810982|ref|XP_639198.1| peptide chain release factor 1 [Dictyostelium discoideum AX4] gi|60467811|gb|EAL65826.1| peptide chain release factor 1 [Dictyostelium discoideum AX4] Length = 430 Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 102/348 (29%), Positives = 176/348 (50%), Gaps = 15/348 (4%) Query: 13 LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 +F + ++ L D ++ E K + +E Q + + ++ ++L + L Sbjct: 76 VFRLNLMGKKSKELRN-MIDSNMGLGQSEIKKISKELQETAEPLGYFGDLIEKLKELKEL 134 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA-----YLEVHAGAGG 127 + +EE D Q ++ ++K E + LL + LE+ AG GG Sbjct: 135 QTMLVEETDEDGKQMIKSDINKLKQEEIEPLEKQLLFSLLPGSKDDAGDAILEIRAGTGG 194 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 +E+Q + + MY + ++ + E LE+ E G + T+ + G +G+LK E GV Sbjct: 195 SEAQLFTQDVYEMYRSYCLQKGWTFEPLELSVTEVGGYRDVTVSVSGKGVFGFLKYESGV 254 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HR+ R+ ++ R HTS ++ + P ++I+I + D ++D YR+SG GGQ VNTTD Sbjct: 255 HRVQRVPLTETQGRIHTSTITVAILP-EPKDVDIQIHDRDLKVDIYRSSGNGGQSVNTTD 313 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307 SAVRITH+PTG+ V Q ERSQH+N+++A +L+A++YE E + + +IG Sbjct: 314 SAVRITHLPTGITVAMQDERSQHQNRSKAMKILKARIYERERIRLQNER--VSERNAQIG 371 Query: 308 ---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351 +IR+Y P + D R +I + + ++ D LD F+ L Sbjct: 372 SALRSERIRTYNY-PQDRITDHRVSI-NGNLNSCMNSDGLDSFIDEIL 417 >gi|158300562|ref|XP_320450.4| AGAP012078-PA [Anopheles gambiae str. PEST] gi|157013219|gb|EAA00316.4| AGAP012078-PA [Anopheles gambiae str. PEST] Length = 760 Score = 159 bits (401), Expect = 7e-37, Method: Composition-based stats. Identities = 103/303 (33%), Positives = 155/303 (51%), Gaps = 21/303 (6%) Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES---LLSGEADSNDAY 118 +Q L D+ D+ L + L + + + E D Sbjct: 456 LQRELKDDKD--------DEMVQLLKEEREAYGSILFRLDSEILNGILSMDDEEDYGSLI 507 Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +EV AG GG E+ +A L MY + E + ++ E L+ + + G + AT +I GP+AY Sbjct: 508 MEVTAGVGGQEAMLFARELFDMYCGYVEYKGWEVEMLQTENTDIGGTRHATTVISGPDAY 567 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 +LK E GVHR+ RI + + R HTS ++ + P DD ++E+ E D +I+T RASGA Sbjct: 568 RYLKHEGGVHRVQRIPATEKSGRIHTSTVTVSIIPRPDDF-QVELKEKDLKIETKRASGA 626 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVNTTDSAVRI H+PTG+ V+CQ ERSQ KN+ A L AKL ++EL+ R Sbjct: 627 GGQHVNTTDSAVRIVHLPTGIAVECQTERSQQKNREIAKQKLTAKLMQIELEARFSSTQA 686 Query: 299 GESSKTEIG---WGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDG--DLDDFMKATLA 352 + K+++G +IR+Y + D R + L+G LDD ++ Sbjct: 687 LK--KSQVGQSLRNEKIRTYNFN-QDRITDHRIEGGTAHNLKGFLEGGEQLDDMIEKLRR 743 Query: 353 IKK 355 ++ Sbjct: 744 SQR 746 >gi|301029486|ref|ZP_07192568.1| putative peptide chain release factor 1 [Escherichia coli MS 196-1] gi|299877629|gb|EFI85840.1| putative peptide chain release factor 1 [Escherichia coli MS 196-1] Length = 219 Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 85/211 (40%), Positives = 128/211 (60%), Gaps = 6/211 (2%) Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 R+++ E + +GE G K I G YG LK E G HR+ R+ +S R HTS Sbjct: 1 RRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSAC 60 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ V P + D+ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ER Sbjct: 61 TVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDER 120 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324 SQHKNKA+A ++L A+++ E+ KR++ + + +G G + R+Y P V Sbjct: 121 SQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDRNRTYNF-PQGRVT 177 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 D R N+ +V++G LD ++ + + Sbjct: 178 DHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 208 >gi|6321295|ref|NP_011372.1| Mrf1p [Saccharomyces cerevisiae S288c] gi|400276|sp|P30775|RF1M_YEAST RecName: Full=Peptide chain release factor 1, mitochondrial; Short=MRF-1; Short=MtRF-1; Flags: Precursor gi|3972|emb|CAA42932.1| mitochondrial release factor 1 [Saccharomyces cerevisiae] gi|1322722|emb|CAA96855.1| MRF1 [Saccharomyces cerevisiae] gi|1498241|emb|CAA68219.1| MRF1 [Saccharomyces cerevisiae] gi|151943668|gb|EDN61978.1| mitochondrial translation release factor [Saccharomyces cerevisiae YJM789] gi|190407089|gb|EDV10356.1| mitochondrial polypeptide chain release factor [Saccharomyces cerevisiae RM11-1a] gi|207345440|gb|EDZ72262.1| YGL143Cp-like protein [Saccharomyces cerevisiae AWRI1631] gi|256272236|gb|EEU07227.1| Mrf1p [Saccharomyces cerevisiae JAY291] gi|259146366|emb|CAY79623.1| Mrf1p [Saccharomyces cerevisiae EC1118] gi|285812067|tpg|DAA07967.1| TPA: Mrf1p [Saccharomyces cerevisiae S288c] gi|323304985|gb|EGA58739.1| Mrf1p [Saccharomyces cerevisiae FostersB] Length = 413 Score = 159 bits (401), Expect = 8e-37, Method: Composition-based stats. Identities = 106/345 (30%), Positives = 161/345 (46%), Gaps = 18/345 (5%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 + L L+ + +V + + L E +++L + L E+ Sbjct: 58 EKYEAELKDLDKDLSC-GIHFDVNK----QKHYAKLSALTDTFIEYKEKLNELKSLQEMI 112 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQF--ESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + E + E + + L + LE+ G GG E+ + Sbjct: 113 VSDPSLRAEAEQEYAELVPQYETTSSRLVNKLLPPHPFADKPSLLELRPGVGGIEAMIFT 172 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 LL MY +A RK+K + ++ E GI A L I+ +Y L+ E GVHR+ RI Sbjct: 173 QNLLDMYIGYANYRKWKYRIISKNENESGSGIIDAILSIEEAGSYDRLRFEAGVHRVQRI 232 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSI-------EIEISESDCRIDTYRASGAGGQHVNTT 246 ++ R HTS +++ V P + D E + R+D RASG GGQHVNTT Sbjct: 233 PSTETKGRTHTSTAAVVVLPQIGDESAKSIDAYERTFKPGEIRVDIMRASGKGGQHVNTT 292 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TE 305 DSAVR+THIP+G+VV Q ERSQHKNKA+A+ +LRA+L E E ++EE S+ + Sbjct: 293 DSAVRLTHIPSGIVVSMQDERSQHKNKAKAFTILRARLAEKERLEKEEKERKARKSQVSS 352 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKA 349 +IR+Y P + D R VL G+ LD+ ++A Sbjct: 353 TNRSDKIRTYNF-PQNRITDHRCGFTLLDLPGVLSGERLDEVIEA 396 >gi|224048051|ref|XP_002187712.1| PREDICTED: mitochondrial translational release factor 1-like [Taeniopygia guttata] Length = 421 Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats. Identities = 100/259 (38%), Positives = 143/259 (55%), Gaps = 9/259 (3%) Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 + + S E D +D +EV AG GG E+ + + + MY R+A +K+K E LE Sbjct: 145 ELKQQIVLLLIPSEETDESDLVMEVTAGVGGQEAMLFTSEIFDMYQRYAAYKKWKFEVLE 204 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 E G++ A I G AY ++K E GVHR+ R+ + R HTS ++ + P Sbjct: 205 YFPSELGGLRHAVASIAGLEAYKYMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPT 264 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + ++I+ D RI+T RASGAGGQHVNTTDSAVRI HIPTG+V +CQQERSQ +NK +A Sbjct: 265 EM-RLQINPKDLRIETKRASGAGGQHVNTTDSAVRIVHIPTGIVSECQQERSQIRNKEKA 323 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKT 333 ML AKLY +L+ EE + K +I G +IR+Y P + D R + Sbjct: 324 MQMLCAKLYNAKLE--EETKKRNYARKIQIGTKGRSEKIRTYNF-PQDRITDHRISRSVH 380 Query: 334 SPSDVLDGD--LDDFMKAT 350 + G+ LD+ ++ Sbjct: 381 HVESFMLGEEMLDEMIQTL 399 >gi|156844661|ref|XP_001645392.1| hypothetical protein Kpol_534p13 [Vanderwaltozyma polyspora DSM 70294] gi|156116054|gb|EDO17534.1| hypothetical protein Kpol_534p13 [Vanderwaltozyma polyspora DSM 70294] Length = 404 Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 100/346 (28%), Positives = 157/346 (45%), Gaps = 22/346 (6%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 ++ L L D + + ++ E + +L D L E+ Sbjct: 47 ESYCDELDKLKKDMFDGNAFD-----VEQQKKYARFSTIADAFHEYKSQLDDYKGLNEMI 101 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTESQDWA 134 + L L + +E+ G GG E+ +A Sbjct: 102 KSDPALKDEASQELEQLIPLLNRSSSVLLDKLLPPHEFADKPCIIELRPGVGGIEAMIFA 161 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 LL MY +A +K+K E + ++ E GI A L I P AY ++ E GVHR+ R+ Sbjct: 162 QDLLNMYIGYATSKKWKHEIISRNENESGSGIVDAILSINEPGAYDRMRLEVGVHRVQRV 221 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIE-------ISESDCRIDTYRASGAGGQHVNTT 246 ++ R HTS +++ V P + + E E + RID RA G GGQHVNTT Sbjct: 222 PATETKGRTHTSTAAVVVLPQLGNGSEREAEAYERTFKPDEIRIDVMRARGKGGQHVNTT 281 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 DSAVR+TH P+G+V+ Q ERSQHKNKA+A+ +L++KL E+E E+ + K ++ Sbjct: 282 DSAVRLTHFPSGIVISMQDERSQHKNKAKAFAILKSKLAEIER--LEKEEKERSARKEQV 339 Query: 307 G---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMK 348 +IR+Y P + D R + + ++V+ G+ LD+ M Sbjct: 340 STTDRSDKIRTYNY-PQNRITDHRCGLTLYALNEVITGERLDEVMD 384 >gi|329913866|ref|ZP_08275999.1| peptide chain release factor RF-2 [Oxalobacteraceae bacterium IMCC9480] gi|327545272|gb|EGF30526.1| peptide chain release factor RF-2 [Oxalobacteraceae bacterium IMCC9480] Length = 164 Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 99/162 (61%), Positives = 128/162 (79%), Gaps = 1/162 (0%) Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+DS + RHTSFSS++VYP VDDS+EI+I+ +D R+DTYRASGAGGQH+N TDSAVR Sbjct: 2 RKSPFDSANGRHTSFSSLFVYPEVDDSLEIDINPADVRVDTYRASGAGGQHINKTDSAVR 61 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +TH PTG+VVQCQ +RSQH+N+A+AW ML+++LYE E++KR E SKT+IGWG Q Sbjct: 62 LTHGPTGIVVQCQNDRSQHRNRAEAWAMLKSRLYEHEMRKRMSDQQKLEDSKTDIGWGHQ 121 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 IRSYVL +KDLRT+ E + VLDGD+D+F+ A+L Sbjct: 122 IRSYVLD-QSRIKDLRTSFETGNTKAVLDGDIDEFIAASLKQ 162 >gi|289812362|ref|ZP_06542991.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 288 Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats. Identities = 94/259 (36%), Positives = 139/259 (53%), Gaps = 1/259 (0%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + + Q D + Sbjct: 30 LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 89 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE ++ + + Q L D +A+LEV AG GG E+ +A Sbjct: 90 LDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 149 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + + +GE G K I G YG LK E G HR+ R+ Sbjct: 150 GDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 209 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + ++ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 210 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 269 Query: 255 IPTGVVVQCQQERSQHKNK 273 +PTG+VV+CQ ERSQHKNK Sbjct: 270 LPTGIVVECQDERSQHKNK 288 >gi|302759765|ref|XP_002963305.1| hypothetical protein SELMODRAFT_405087 [Selaginella moellendorffii] gi|300168573|gb|EFJ35176.1| hypothetical protein SELMODRAFT_405087 [Selaginella moellendorffii] Length = 927 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 104/330 (31%), Positives = 174/330 (52%), Gaps = 18/330 (5%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLILLE 74 + R + L+ +P + + E + +E + LD ++ IK ++ + + L++ Sbjct: 26 SIEDRHACLSKALLEPGIASD--ELIKMNKELRKLDYSVDMIKALRAKEKEVIGLKELVK 83 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 ++E+++ L ++ L + +++ GAGG E+ +A Sbjct: 84 ESVEDEEMRRLASGELQTATREVRDAQHDVLLELIPKDEADSR------GAGGDEASIFA 137 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 + L +MY ++ ++ E L I + G K A+ +I G YG LK E GVHR+ R+ Sbjct: 138 SDLFKMYEKYTANNSWRFEVLSITTTDTRGYKEASAVISGDGVYGALKFESGVHRVQRVP 197 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 + R HTS +S+ + P + +++EI + +IDTYRA GAGGQHVNTT SAVR+TH Sbjct: 198 VTEKAGRIHTSTASVAILP-EANEVDVEIRNDEIKIDTYRAGGAGGQHVNTTCSAVRVTH 256 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WGRQ 311 PTG+VV Q ERSQHKNKA+A ++L A+LYELE + A+ E + +IG + Sbjct: 257 APTGIVVAIQDERSQHKNKAKALSILYARLYELERSR--AAASRSELRQDQIGSSDRSER 314 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 IR+Y P V D + + + + +++G Sbjct: 315 IRTYNF-PQGRVTDHQVGVTQHAIEQIMEG 343 >gi|325278151|ref|ZP_08143660.1| peptide chain release factor 2 [Pseudomonas sp. TJI-51] gi|324096726|gb|EGB95063.1| peptide chain release factor 2 [Pseudomonas sp. TJI-51] Length = 157 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 99/156 (63%), Positives = 120/156 (76%), Gaps = 1/156 (0%) Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 S +RRHTSFS+++V P +DD +EIEI+ SD RIDTYR+SGAGGQHVNTTDSAVRITH+PT Sbjct: 1 SGARRHTSFSAVFVSPEIDDKVEIEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITHVPT 60 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 VV CQ ERSQH NK A MLRAKLYELE+QKR + E SK++IGWG QIRSYVL Sbjct: 61 NTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDSKSDIGWGHQIRSYVL 120 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +KDLRT +E++ VLDGDLD +++A+L Sbjct: 121 DD-SRIKDLRTGVERSDCQKVLDGDLDQYLEASLKQ 155 >gi|114052118|ref|NP_001040455.1| mitochondrial translational release factor 1 [Bombyx mori] gi|95102962|gb|ABF51422.1| mitochondrial translational release factor 1 [Bombyx mori] Length = 401 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 100/333 (30%), Positives = 159/333 (47%), Gaps = 14/333 (4%) Query: 33 PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN- 91 +L + ++ R Q + ++ +++ L EL +E D S +++ Sbjct: 50 ENLLSKMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDSEIKKMIKEE 109 Query: 92 ---LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148 + E++ LL LE+ AGAGG E+ +A L MY +A + Sbjct: 110 AAIYLKRLKEIDDDLQLILLEPPLTEGGVLLELTAGAGGQEAMLFAKELFNMYQSYAINK 169 Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208 ++ + E G++ ++LI+G ++ E GVHR+ RI + R HTS + Sbjct: 170 GWEVDIASFDLTEIGGVRKGSMLIQGFGVPELMRMEAGVHRVQRIPATEKGGRIHTSTVT 229 Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + + P IE+ I E D I+T RASGAGGQHVNTTDSAVR+ H PTG V+CQ+ RS Sbjct: 230 VAILPQ-PSEIELNIPERDVVIETKRASGAGGQHVNTTDSAVRLIHTPTGTTVECQEGRS 288 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKD 325 Q KNK A LR L LE Q +E+ + K+++G G + IR+Y P V + Sbjct: 289 QIKNKQIAMQKLRTLL--LEKQIQEQALKLQSERKSQVGSGNRNEKIRTYNF-PQDRVTE 345 Query: 326 LR-TNIEKTSPSDVLDG--DLDDFMKATLAIKK 355 R + ++G L+ ++ L ++ Sbjct: 346 HRDGGGTFHNLKGFMEGGEQLEQLQESLLKKER 378 >gi|312220543|emb|CBY00484.1| similar to peptide chain release factor 1 [Leptosphaeria maculans] Length = 418 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 103/355 (29%), Positives = 166/355 (46%), Gaps = 28/355 (7%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81 L K D + AK L E + NA+ + + + + L+ + + + Sbjct: 52 EHKQLAAKLND-GF--DTRIAKKLG-EYSPIVNALGKWDKANESVTELTSLIHDSTTDPE 107 Query: 82 CSILQETSDNLQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139 L R +L + + + LE+ GAGG+E+ +A L R Sbjct: 108 LRELAADDLIETREQLSAASQSLITALVPVHPFAHLPCLLELRPGAGGSEAAIFAGDLFR 167 Query: 140 MYTRWAEKRKFKTE---ALEIHDGEEAGI--KSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 MY + + F+T I+ EAG+ A L ++ NAYG + E GVHR+ R+ Sbjct: 168 MYLAFCNRNGFRTNLLKYENINGTSEAGVPLSEAVLEVENDNAYGVFRCEAGVHRVQRVP 227 Query: 195 PYDSNSRRHTSFSSIWVYP-----------VVDDSIEIEISESDCRIDTYRASGAGGQHV 243 ++ R HTS S+ V P D + I + +++ RASGAGGQHV Sbjct: 228 ATETKGRTHTSAVSVHVLPSLQENNSSEENFDDPDSDYYIDVKEVKVEVMRASGAGGQHV 287 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS- 302 N T+SAVR+TH+PT VV Q RSQHKNK +AW +LR+++ + ++REE + S Sbjct: 288 NKTESAVRLTHLPTNTVVAMQDSRSQHKNKEKAWALLRSRIAQSRREQREEEISNMRRSV 347 Query: 303 --KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353 ++G G ++R+Y Q V D R+ + DV++G +L+ M++ + Sbjct: 348 IGVAKMGRGDKVRTYNWG-QQRVTDHRSGLTVHDLDDVMEGGQNLEKVMESVRSW 401 >gi|159462370|ref|XP_001689415.1| peptide chain release factor [Chlamydomonas reinhardtii] gi|158283403|gb|EDP09153.1| peptide chain release factor [Chlamydomonas reinhardtii] Length = 263 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 99/256 (38%), Positives = 145/256 (56%), Gaps = 9/256 (3%) Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 + LL G D A L + AGAGG ++ DWA ML RMY RWAE ++ L+ G+ Sbjct: 1 WELRRLLCGPYDDRGARLTISAGAGGVDAMDWAEMLERMYMRWAEAGGYQVAVLDRAAGD 60 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 EAGI +AYG+L+ E+G HRLVR SP+++ R TSF+ + V PV+ Sbjct: 61 EAGITGG------RHAYGYLRCEKGTHRLVRNSPFNAKGLRQTSFAGVDVMPVLGPDDLP 114 Query: 222 --EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 +++E D I T R+ G GGQ+VN ++ VRI H+PTG+ V+C QERSQ +NKA A ++ Sbjct: 115 ELDLNEKDLEITTMRSGGKGGQNVNKVETGVRILHVPTGLAVKCTQERSQAQNKAIALDL 174 Query: 280 LRAKLYELELQKREEIANIGESSKTEIGW-GRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 L+A+L + E A + + +++ + PY++VKD RT E + V Sbjct: 175 LKARLLANSREPPMEEAGSRMGAVADCNTHAHRVQGCLFHPYKLVKDTRTGTETSDVQAV 234 Query: 339 LDGDLDDFMKATLAIK 354 +DG+L FM A L + Sbjct: 235 MDGELGGFMAAVLRQR 250 >gi|218514632|ref|ZP_03511472.1| peptide chain release factor 1 [Rhizobium etli 8C-3] Length = 236 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 83/208 (39%), Positives = 125/208 (60%), Gaps = 8/208 (3%) Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 + +K E L +GE G K I G + LK E GVHR+ R+ ++ R HTS + Sbjct: 20 KGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSAA 79 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 ++ V P + I+IEI D RIDT R+SGAGGQHVNTTDSAVRITH+P+G+VV E+ Sbjct: 80 TVAVLP-EAEEIDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVRITHLPSGIVVTSS-EK 137 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324 SQH+N+A+A +LR++LY+ E Q+ + K+++G G +IR+Y P V Sbjct: 138 SQHQNRAKAMQVLRSRLYDAERQR--ADSERSADRKSQVGSGDRSERIRTYNF-PQGRVT 194 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLA 352 D R N+ +++G++++ + A +A Sbjct: 195 DHRINLTLYKLDRMMEGEIEEVVDALMA 222 >gi|46117472|ref|XP_384754.1| hypothetical protein FG04578.1 [Gibberella zeae PH-1] Length = 445 Score = 156 bits (395), Expect = 4e-36, Method: Composition-based stats. Identities = 92/360 (25%), Positives = 165/360 (45%), Gaps = 33/360 (9%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 + L + AK + E + A+ +++ Q + + +L+ A Sbjct: 61 QSLTTEHDALQKNLNS-SF--DSTTAKRVG-ELSRVAEALKALEKSQTSVKELKQMLDDA 116 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN--DAYLEVHAGAGGTESQDWA 134 + D + + + + +LE ++ + L+ LE G GG E + + Sbjct: 117 SLDQDLAAIARDELSSETGQLEALARKLSASLTPRHPFADFPCMLEFRPGPGGLEGRFFM 176 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAG----------IKSATLLIKGPNAYGWLKGE 184 + L +MY +R ++ ++ + AG ++ A L + A+ +GE Sbjct: 177 DTLFKMYKGLCMRRGYRHTVVKYEFADGAGDSSSSAGENPLQEAILEVHDQGAFDIFRGE 236 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYP-----------VVDDSIEIEISESDCRIDTY 233 G+HR+ RI ++ R HTS ++WV P D + ++ + +I+T Sbjct: 237 AGMHRVQRIPSTETKGRVHTSAVAVWVLPSFPENSATSIDFEDPESDFYVNPQELKIETM 296 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 RA GAGGQHVN T+SA+R+TH+PTG V Q RSQ +N+ +AW ++R+++ + ++RE Sbjct: 297 RARGAGGQHVNKTESAIRMTHLPTGTTVSMQDHRSQQRNREEAWKLMRSRIADQRREQRE 356 Query: 294 EIANIGES---SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMK 348 + A+ + SKT+I G +IR+Y D R I+ +VL+G LD M Sbjct: 357 QEASQLRNSVLSKTQITRGDKIRTYNYN-QDRCTDHRAGIDVHGLPNVLEGGEKLDKIMD 415 >gi|66805655|ref|XP_636549.1| class I peptide chain release factor [Dictyostelium discoideum AX4] gi|60464924|gb|EAL63039.1| class I peptide chain release factor [Dictyostelium discoideum AX4] Length = 424 Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats. Identities = 125/342 (36%), Positives = 193/342 (56%), Gaps = 8/342 (2%) Query: 18 NAVQRLSFLNT-KTEDPHLWQNVIEAKML--MRERQHLDNAISFIKEIQDRLCDNLILLE 74 +R + + + + + + ++ +I + + D L ++E Sbjct: 83 AIFKRFEEMKLPEMIESGIGIDASNMDTINQIKNYNQTKQSIEELNLLSKEFNDYLEVVE 142 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 ++ D L+ET + ++ + ++L++G+ DS LE+ AGAGG +S DW Sbjct: 143 MSKNIGDNDWLKETRSLINQLFSNCSELEVKALMNGKDDSKGCLLEIQAGAGGNDSMDWT 202 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 +L MY +W ++ + E ++ DGE G + A+L I G NAYGWL+ E G+HRL+RIS Sbjct: 203 KILFEMYCKWGARKGYNVEIIDTADGEF-GYRHASLKIDGHNAYGWLRTEMGIHRLIRIS 261 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+ S+ +RHTSF+S+ VYP+ DDSI+I I D +T R+SGAGGQHVN T+SAVRI H Sbjct: 262 PFSSSGKRHTSFASVVVYPISDDSIKINIDPKDLHFETLRSSGAGGQHVNKTESAVRIVH 321 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--RQI 312 IPTG+ V ERSQH+NK+ +L++KLY EL+K+ E + W + Sbjct: 322 IPTGISVLSSSERSQHQNKSNGLLLLKSKLYSHELKKKIEAEKSFRDELGKNSWASDSVV 381 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLA 352 R+Y + P + VKD RT IE S +LDG +LD+ +K L+ Sbjct: 382 RNYSMHPQERVKDQRTGIEVLQISKILDGEEELDNMIKKALS 423 >gi|116198067|ref|XP_001224845.1| hypothetical protein CHGG_07189 [Chaetomium globosum CBS 148.51] gi|88178468|gb|EAQ85936.1| hypothetical protein CHGG_07189 [Chaetomium globosum CBS 148.51] Length = 400 Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats. Identities = 95/363 (26%), Positives = 156/363 (42%), Gaps = 32/363 (8%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 L+ E+ + +AK E + +A+ +++ + L + LLE Sbjct: 17 KLAIEHDQLSAALEN-DF--DAKKAKRAG-ELSRVASAVKELEKAKAALVELQGLLESND 72 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 E + ++ LE+ G GG E + +A+ L Sbjct: 73 AEMRELARDDLEATNAQLAESSHNLSVALTPKHPFADMPCLLEIRPGPGGLEGRFFADSL 132 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGI---------KSATLLIKGPNAYGWLKGEQGVH 188 +MY + + ++T ++ + G + A L ++ AYG +GE G+H Sbjct: 133 FQMYKAYCSNKGYRTRIVQYEASDSDGSTGSEGEIPLQEAVLEVQEEGAYGLFRGEAGMH 192 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYP-------------VVDDSIEIEISESDCRIDTYRA 235 R+ R+ + + R HTS ++WV P + I ++ R +T RA Sbjct: 193 RVQRVPATEKSGRTHTSAVAVWVLPSFPENGTSDSEADWDKPESDFYIDPNEVRSETMRA 252 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 GAGGQHVN T+SA+R+THIPTG V Q RSQ +N+ AW +LR++L + + REE Sbjct: 253 GGAGGQHVNKTESAIRLTHIPTGTTVSMQDSRSQQRNREDAWRLLRSRLAQQRREAREEQ 312 Query: 296 ANIGESSK---TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKAT 350 A SS ++I G +IR+Y Q D R+ + + DVL G L+ M + Sbjct: 313 ARQLRSSVLANSQITRGDKIRTYQYQ-QDRCTDHRSGLNTHNLPDVLRGGETLEKVMDSV 371 Query: 351 LAI 353 Sbjct: 372 QNW 374 >gi|14042548|dbj|BAB55295.1| unnamed protein product [Homo sapiens] Length = 238 Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats. Identities = 93/225 (41%), Positives = 126/225 (56%), Gaps = 9/225 (4%) Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 + + + MY ++A +++ E LE E G++ A+ I G AY +K E GVHR+ Sbjct: 1 MLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASASIGGSEAYRHMKFEGGVHRV 60 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ + R HTS ++ + P I + I+ D RIDT RASGAGGQHVNTTDSAV Sbjct: 61 QRVPKTEKQGRVHTSTMTVAILPQ-PTEINLVINPKDLRIDTKRASGAGGQHVNTTDSAV 119 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307 RI H+PTGVV +CQQERSQ KNK A LRAKLY + L+ EEI + K +I G Sbjct: 120 RIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLE--EEINKRQNARKIQIGSKG 177 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKAT 350 +IR+Y P V D R N + GD LD+ +++ Sbjct: 178 RSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLLDELVQSL 221 >gi|114609867|ref|XP_001140527.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes] gi|114609869|ref|XP_001140612.1| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes] Length = 238 Score = 156 bits (393), Expect = 6e-36, Method: Composition-based stats. Identities = 92/225 (40%), Positives = 125/225 (55%), Gaps = 9/225 (4%) Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 + + + MY ++A +++ E LE E G++ A+ I G AY +K E GVHR+ Sbjct: 1 MLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASASIGGSEAYRHMKFEGGVHRV 60 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ + R HTS ++ + P I + I+ D RIDT RASGAGGQHVNTTDSAV Sbjct: 61 QRVPKTEKQGRVHTSTMTVAILPQ-PTEINLVINPKDLRIDTKRASGAGGQHVNTTDSAV 119 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307 RI H+PTGVV +CQQERSQ KNK A LRAKLY + L+ EE + K +I G Sbjct: 120 RIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLE--EETNKRQNARKIQIGSKG 177 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKAT 350 +IR+Y P V D R N + GD LD+ +++ Sbjct: 178 RSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLLDELVQSL 221 >gi|327267784|ref|XP_003218679.1| PREDICTED: peptide chain release factor 1, mitochondrial-like [Anolis carolinensis] Length = 443 Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats. Identities = 100/354 (28%), Positives = 154/354 (43%), Gaps = 21/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + Q + D + + L + L KEIQ+ + L L Sbjct: 74 LQDVSQEHQSIGQLLND-NSISEYKR-RDLSKRHAELFPLAVSFKEIQEAKKEMQDLEAL 131 Query: 76 ALEEDDCSILQETSDN-------LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG--AG 126 + + Q+I+ + + + D D LEV +G G Sbjct: 132 CAKLNSSEEKALLELAIEEKGVIDQKIRELYQKLFQILIPRDKYDECDVLLEVTSGRTTG 191 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G Q + + MY +A+ + + E + E G+ A I G + Y LK E G Sbjct: 192 GDICQQFTKEVFDMYQNYADYKCWTFEIRKYTPSEYGGLHHAAAYISGDDVYRHLKYEGG 251 Query: 187 VHRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 +HR+ RI +SR + + + + I I++ D RIDT+RA GAGGQHVN Sbjct: 252 IHRVQRIPETGLSSRMQRIHTGTMSVIVLPQLEEINIKVDPKDLRIDTFRAKGAGGQHVN 311 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVRI HIPTG+ V+CQQERSQ N+ +A L+ KLY+ +++ E++ + K Sbjct: 312 TTDSAVRIVHIPTGITVECQQERSQQVNREKAMQALKDKLYQQAIER--ELSQKQSARKM 369 Query: 305 EIGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATLAI 353 ++G +IR+Y V D R + E +L G LD+ + L Sbjct: 370 QLGTRSQSERIRTYNFN-QDRVSDHRISYEVRDIKGILSGKGVLDELINKLLEA 422 >gi|68486252|ref|XP_712983.1| hypothetical protein CaO19.8883 [Candida albicans SC5314] gi|46434408|gb|EAK93818.1| hypothetical protein CaO19.8883 [Candida albicans SC5314] Length = 394 Score = 155 bits (392), Expect = 8e-36, Method: Composition-based stats. Identities = 93/349 (26%), Positives = 152/349 (43%), Gaps = 21/349 (6%) Query: 17 DNAVQRLSFLNTKTED---PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 Q L+ K D P L ++ L+ E+ + D+ L Sbjct: 55 QTIQQEHKELSEKLADKYIPDLQMKFDNYTNILSMFGKLETLTQEYIEL-TEITDDPDLY 113 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 + A EE ++ + + V + + + + +E+ G GG E+ + Sbjct: 114 KEAQEELKSIVIPQI-------EKLVSELRVKLRPPVKYANKGCIIELRPGVGGNEASLF 166 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 LL MY +A + +K + + I A L I +Y ++ E GVHR+ RI Sbjct: 167 TGDLLNMYMNFASEMNWKYKIISEGKNSSGFINEAILSIDTLGSYDIMRHESGVHRVQRI 226 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRIDTYRASGAGGQHVNTT 246 ++ R HTS +++ V P + + E + + RIDT RA G GGQHVNTT Sbjct: 227 PETETKGRVHTSTAAVVVLPKLSEGNESSLKDDERVFAPGEVRIDTMRAGGKGGQHVNTT 286 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TE 305 DSAVR+ HIPTG++V Q ERSQ NKA+A+ +LR++L + E ++ + + + Sbjct: 287 DSAVRLLHIPTGMIVIQQDERSQPLNKAKAFAILRSRLAQKEQEEEMLKQKKLRTDQVSS 346 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAI 353 +I++Y + V D R N VL+G L + + Sbjct: 347 TDRSDKIKTYNYK-ENRVTDHRINYSMHDLEGVLEGRKLGQLIDVYRSQ 394 >gi|116515195|ref|YP_802824.1| hypothetical protein BCc_269 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116257049|gb|ABJ90731.1| peptide chain release factor RF-2 [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 365 Score = 155 bits (392), Expect = 8e-36, Method: Composition-based stats. Identities = 130/278 (46%), Positives = 191/278 (68%), Gaps = 1/278 (0%) Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 E+D +IL+E + + IK ++ + + + + D N+ YL++ +G+GG ESQDW Sbjct: 87 FKLENDINILKEINIQYKAIKNKIYVLESYMMFNHKNDKNNCYLDIQSGSGGLESQDWTK 146 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 MLL+MY ++ K+KF T+ + G+ GIKS TL IKG A+GWL+ E G+HRLVR SP Sbjct: 147 MLLKMYLKYLYKKKFVTKIISETVGDNGGIKSITLSIKGKFAFGWLRTETGIHRLVRKSP 206 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +D+ +RHT+FSSI+VYP + ++I+I + + RID YR+SGAGGQHVN T+SAVRITH+ Sbjct: 207 FDAGKKRHTTFSSIFVYPALTNNIDINLQSKNLRIDVYRSSGAGGQHVNRTESAVRITHL 266 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315 PTG+V QCQ RSQHKNK A L+AKLYE+E++K++ K+ I G QIRSY Sbjct: 267 PTGIVTQCQNSRSQHKNKNTAIKQLKAKLYEIEIKKKKIEKKKINKKKSNIRSGNQIRSY 326 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +L +KD+RT +E+ ++VL+GD+ +F+K +L + Sbjct: 327 ILDD-SRIKDMRTKLERKDINNVLNGDIHEFIKKSLKM 363 >gi|68486191|ref|XP_709944.1| hypothetical protein CaO19.1303 [Candida albicans SC5314] gi|46434441|gb|EAK93850.1| hypothetical protein CaO19.1303 [Candida albicans SC5314] gi|238881487|gb|EEQ45125.1| peptide chain release factor 1, mitochondrial precursor [Candida albicans WO-1] Length = 394 Score = 155 bits (392), Expect = 8e-36, Method: Composition-based stats. Identities = 91/348 (26%), Positives = 155/348 (44%), Gaps = 19/348 (5%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 Q L+ K D ++ ++ + N +S +++ + + L E+ Sbjct: 55 QTIQQEHKELSEKLADKYIPDLQVKF-------DNYTNILSMFDKLETLTQEYIELTEIT 107 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQF--ESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D QE ++ ++E + + + +E+ G GG E+ + Sbjct: 108 DDPDLYKEAQEELKSIVIPQIEKLVSELRVKLRPPVKYADKGCIIELRPGVGGNEASLFT 167 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LL MY +A + +K + + I A L I +Y ++ E GVHR+ RI Sbjct: 168 GDLLNMYMNFASEMNWKYKIISEGKNSSGFINEAILSIDTLGSYDIMRHESGVHRVQRIP 227 Query: 195 PYDSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRIDTYRASGAGGQHVNTTD 247 ++ R HTS +++ V P + + E + + RIDT RA G GGQHVNTTD Sbjct: 228 ETETKGRVHTSTAAVVVLPKLSEGNESSLKDDERVFAPGEVRIDTMRAGGKGGQHVNTTD 287 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEI 306 SAVR+ HIPTG++V Q ERSQ NKA+A+ +LR++L + E ++ + + + Sbjct: 288 SAVRLLHIPTGMIVIQQDERSQPLNKAKAFAILRSRLAQKEQEEEMLKQKKLRTDQVSST 347 Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAI 353 +I++Y + V D R N VL+G L + + Sbjct: 348 DRSDKIKTYNYK-ENRVTDHRINYSMHDLEGVLEGRKLGQLIDVYRSQ 394 >gi|226329845|ref|ZP_03805363.1| hypothetical protein PROPEN_03757 [Proteus penneri ATCC 35198] gi|225200640|gb|EEG82994.1| hypothetical protein PROPEN_03757 [Proteus penneri ATCC 35198] Length = 274 Score = 155 bits (392), Expect = 8e-36, Method: Composition-based stats. Identities = 91/260 (35%), Positives = 135/260 (51%), Gaps = 1/260 (0%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + + + + + L +E L + + + + D + Sbjct: 9 LEALQERYEEIQALLSEADVIASQERFRALSKEYSQLTDVTACFSQWRKVQDDIEAAEMM 68 Query: 76 ALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE Q + Q L D + +LE+ AG GG E+ +A Sbjct: 69 LDDPEMKEMAQEELKEAQALNDDLEQQLQVLLLPKDPDDEFNCFLEIRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + ++GE G K + G AYG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAESRRWRIEVMNANEGEHGGYKEVIAKVVGDGAYGVLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V V ++ +IS SD RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ETESQGRIHTSACTVAVLAEVPEAELPDISPSDLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKA 274 IPTG+VV+CQ ERSQHK Sbjct: 249 IPTGIVVECQDERSQHKKTK 268 >gi|226493092|ref|NP_001141218.1| hypothetical protein LOC100273305 [Zea mays] gi|194703328|gb|ACF85748.1| unknown [Zea mays] Length = 407 Score = 155 bits (392), Expect = 9e-36, Method: Composition-based stats. Identities = 93/360 (25%), Positives = 163/360 (45%), Gaps = 33/360 (9%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 + L + + AK + E + A+ + Q + + +L+ Sbjct: 25 QSLTSEHDDLQKTLNN-SF--DSSIAKRVG-ELSRVAEALKAWQTSQASVAELTSMLDDP 80 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN--DAYLEVHAGAGGTESQDWA 134 ++ D + + + + KLE ++ + L+ LE G GG E + + Sbjct: 81 DQDADLAAIARDELSSETGKLESLARRLSASLTPRHPFADFPCMLEFRPGPGGLEGRYFM 140 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAG----------IKSATLLIKGPNAYGWLKGE 184 + L +MY +R ++ ++ + AG ++ A L + P A+ + E Sbjct: 141 DTLFKMYKALCMRRGYRHTVVKYEFADTAGDSSSSAGENPLQEAILEVHDPGAFDIFRSE 200 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYP-----------VVDDSIEIEISESDCRIDTY 233 G+HR+ RI ++ R HTS ++WV P D + ++ + +I+T Sbjct: 201 AGMHRVQRIPSTETKGRVHTSAVAVWVLPSFPENGAANIDFDDPESDFYVNPQEVKIETM 260 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 RA GAGGQHVN T+SA+R+TH+PTG V Q RSQ +N+ +AW +LR+++ + + RE Sbjct: 261 RARGAGGQHVNKTESAIRMTHLPTGTTVSMQDHRSQQRNREEAWKLLRSRIADQRREARE 320 Query: 294 EIANIGES---SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMK 348 E A+ + SKT+I G +IR+Y D R ++ +VL+G LD M Sbjct: 321 EEASNLRNSVLSKTQITRGDKIRTYNYN-QDRCTDHRAGVDVHDLPNVLEGGEKLDRIMD 379 >gi|312375908|gb|EFR23156.1| hypothetical protein AND_13424 [Anopheles darlingi] Length = 406 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 103/314 (32%), Positives = 158/314 (50%), Gaps = 14/314 (4%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI----KLEVEYKQFESL 107 L N + ++ + + + L EL ++DD I + +L+ E + Sbjct: 83 LSNVVEMYEQRKIVVENLGSLKELKDDKDDEMIQLLKEEREAYSNILGRLDREIMEGILS 142 Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167 + + + +EV AG GG E+ +A L MY + E + ++ E L+ + GI+ Sbjct: 143 MDEDEEYGSLIMEVTAGVGGQEAMLFARELFDMYCGYVEHKDWEVEMLQTEGTDLGGIRH 202 Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 AT++I G + Y LK E GVHR+ RI + + R HTS ++ + P DD + E D Sbjct: 203 ATIIINGTDVYRCLKYEGGVHRVQRIPATEKSGRIHTSTVTVAIIPRPDDFEVD-LKEKD 261 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+CQ ERSQ KN+ A L AKL + Sbjct: 262 LKIETKRASGAGGQHVNTTDSAVRIVHLPTGIAVECQTERSQVKNREIAKQKLVAKLMQQ 321 Query: 288 ELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDG-- 341 EL+ R + K+++G +IR+Y + D R + L+G Sbjct: 322 ELEARFASTQALK--KSQVGQSLRNEKIRTYNFN-QDRITDHRIEGGTVHNLKGFLEGGQ 378 Query: 342 DLDDFMKATLAIKK 355 LDD + ++ Sbjct: 379 QLDDMIDKLHRSER 392 >gi|157134367|ref|XP_001663262.1| mitochondrial peptide chain release factor [Aedes aegypti] gi|108870516|gb|EAT34741.1| mitochondrial peptide chain release factor [Aedes aegypti] Length = 422 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 102/323 (31%), Positives = 167/323 (51%), Gaps = 14/323 (4%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELA-LEEDDCSILQETSDNLQRIKLEVEY 101 K ++ L + + ++ + + + L E++ +++D L L Sbjct: 89 KKDIKRMALLSHVVEMYEQRRIIMDNLNSLQEMSAEKDEDMLQLMREEKEAYTNILRKLD 148 Query: 102 KQFES---LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 + + + E D N LEV AG GG E+ ++ L MY + + + ++TE +E Sbjct: 149 GEIMNGILSMDDEEDYNTLILEVAAGVGGQEAMLFSRELFDMYCGFIDYKGWETEVIETE 208 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 D E GI+ A++++ G +AY +LK E GVHR+ R+ + ++R HTS +++ V P D+ Sbjct: 209 DTELGGIRHASIVVHGRDAYRYLKFEAGVHRVQRVPTTEKSARIHTSTATVSVIPRPDEF 268 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 + + D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+CQ ERSQ KNK A Sbjct: 269 EIE-LKDKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGMAVECQTERSQVKNKEIAKQ 327 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTS 334 L AKL + EL+ + + K+++G +IR+Y + D R + Sbjct: 328 KLLAKLTQQELESKFNATQSMK--KSQVGSSLRNEKIRTYNYN-QDRITDHRVDGGTTHN 384 Query: 335 PSDVLDG--DLDDFMKATLAIKK 355 L+G L+D + A+ + Sbjct: 385 LKAFLEGGSQLEDMIAKLQAMHR 407 >gi|154310299|ref|XP_001554481.1| hypothetical protein BC1G_07069 [Botryotinia fuckeliana B05.10] gi|150851401|gb|EDN26594.1| hypothetical protein BC1G_07069 [Botryotinia fuckeliana B05.10] Length = 402 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 93/342 (27%), Positives = 155/342 (45%), Gaps = 33/342 (9%) Query: 44 MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL-----QRIKLE 98 + + L + +++ ++ L +L + L+E + ++ Sbjct: 42 KIAKRIGELQDVAVALRKWEETKESLSELDDLLKDSATDEELRELAVEDLTTTTAHLEEL 101 Query: 99 VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 LE+ GAGG E+ +A LLRMY + +++F++ ++ Sbjct: 102 SRNLTTSLTPKHPFAELPCLLEIRPGAGGGEAAIFAADLLRMYRAYCARKRFRSTIIKYE 161 Query: 159 DGEEAG------IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 + G I L I+ +Y L+GE GVHR+ R+ + R HTS S+ V Sbjct: 162 TTDGEGAGSDAPISEVVLEIESSGSYDSLRGEAGVHRVQRVPATEKQGRTHTSAVSVMVL 221 Query: 213 PVVD----------------DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 P + + ++ +D R D RA GAGGQHVNTTDSAVR+TH+P Sbjct: 222 PSFPTTGQEGQEYWEADLNDPNSDYYVNPADVRTDVMRARGAGGQHVNTTDSAVRLTHVP 281 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS---KTEIGWGRQIR 313 T VV Q+ RSQ +N+ +AW +LR++L + + REE S ++G G +IR Sbjct: 282 TNTVVSMQEGRSQLQNRQKAWQVLRSRLAAAKREAREEQLINLRRSVIGVAKMGRGDKIR 341 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353 +Y Q V D R+ + + DV++G +L+ + + A Sbjct: 342 TYNWG-QQRVTDHRSGLSVHNLDDVMEGGDELEKIIDSVKAW 382 >gi|157133587|ref|XP_001656262.1| mitochondrial peptide chain release factor [Aedes aegypti] gi|108870765|gb|EAT34990.1| mitochondrial peptide chain release factor [Aedes aegypti] Length = 422 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 102/323 (31%), Positives = 166/323 (51%), Gaps = 14/323 (4%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLEL-ALEEDDCSILQETSDNLQRIKLEVEY 101 K ++ L + + ++ + + + L E+ +++D L L Sbjct: 89 KKDIKRMALLSHVVEMYEQRRIIMDNLNSLQEMSTEKDEDMLQLMREEKEAYTNILRKLD 148 Query: 102 KQFES---LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 + + + E D N LEV AG GG E+ ++ L MY + + + ++TE +E Sbjct: 149 GEIMNGILSMDDEEDYNTLILEVAAGVGGQEAMLFSRELFDMYCGFIDYKGWETEVIETE 208 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 D E GI+ A++++ G +AY +LK E GVHR+ R+ + ++R HTS +++ V P D+ Sbjct: 209 DTELGGIRHASIVVHGRDAYRYLKFEAGVHRVQRVPTTEKSARIHTSTATVSVIPRPDEF 268 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 + + D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+CQ ERSQ KNK A Sbjct: 269 EIE-LKDKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGMAVECQTERSQVKNKEIAKQ 327 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTS 334 L AKL + EL+ + + K+++G +IR+Y + D R + Sbjct: 328 KLLAKLTQQELESKFNATQSMK--KSQVGSSLRNEKIRTYNYN-QDRITDHRVDGGTTHN 384 Query: 335 PSDVLDG--DLDDFMKATLAIKK 355 L+G L+D + A+ + Sbjct: 385 LKAFLEGGPQLEDMIAKLQAMHR 407 >gi|15806000|ref|NP_294700.1| peptide chain release factor 1 [Deinococcus radiodurans R1] gi|7388053|sp|P56905|RF1_DEIRA RecName: Full=Peptide chain release factor 1; Short=RF-1 gi|6458704|gb|AAF10553.1|AE001950_5 peptide chain release factor 1 [Deinococcus radiodurans R1] Length = 375 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 101/354 (28%), Positives = 155/354 (43%), Gaps = 18/354 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V + + DP + E L R + L ++ ++E + D EL Sbjct: 7 LNELVSEFGLVERRLGDPQALADGREYARLTRRHRELLPLVTLVREREQAEADLSGAREL 66 Query: 76 ALEEDDCSILQETSDN------LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 + D + R+ + L + D D LE+ AGAGG E Sbjct: 67 LQDPDMRDPDMKELAQLEVGGLQARLAEIEAELEVLLLPTDPDDGKDVILELRAGAGGAE 126 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + + LLRMY R+A K L+ + + G + G A+ LK E+GVHR Sbjct: 127 AGLFVMDLLRMYERYAAGLNLKLNVLDAAESDLGGASKVVAEVTGDFAFRALKWERGVHR 186 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + R+ +S R HTS +++ V P + + S+ RID +R+ GAGGQ VNTTDSA Sbjct: 187 VQRVPATESQGRIHTSTATVAVLPEAEPGEV-NLDLSEVRIDVFRSQGAGGQGVNTTDSA 245 Query: 250 VRITHI---PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 VR + P ++V CQ RSQ KN+ +A +L A+L E E RE + +++ Sbjct: 246 VRAVYRAGTPDEIMVICQDGRSQIKNREKALQVLTARLAERERAAREAQERQERA--SQV 303 Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTS--PSDVLDGDLDDFMKATLAIKK 355 G G +IR+Y P V D R E + V+ G L + A ++ Sbjct: 304 GSGDRSEKIRTYNY-PQNRVTDHRLEGEDKNHPLDAVMAGGLAPVVSALARAQR 356 >gi|109502759|ref|XP_001073018.1| PREDICTED: CG5705-like [Rattus norvegicus] gi|149050030|gb|EDM02354.1| rCG37077, isoform CRA_b [Rattus norvegicus] Length = 446 Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats. Identities = 92/351 (26%), Positives = 152/351 (43%), Gaps = 21/351 (5%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 + L+ +D + ++ + + R L ++ +EIQ+ L + Sbjct: 81 EGLNDEYQSLDQCLQD--ISEDEGDRRASHRRHAELAPLVAVYQEIQEAEQAIEELESMC 138 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG---------AGG 127 + Q + ++ + E + GG Sbjct: 139 KSLNKQDEKQLQELVSEERQIIDQKIHRLYSELLEHLVPKEKCDRSNVILEVTSGRTTGG 198 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 Q + + MY ++ + ++ E L + G+ A I G + Y LK E G+ Sbjct: 199 DICQQFTREIFDMYQNYSYYKHWRFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 258 Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 HR+ RI +SR + + + D +++++ D R+DT+RA GAGGQHVNT Sbjct: 259 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKVDPRDLRVDTFRARGAGGQHVNT 318 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVR+ HIPTG+VV+CQQERSQ KNK A +LRA+LY+ ++K + + K + Sbjct: 319 TDSAVRLVHIPTGLVVECQQERSQLKNKEIALRVLRARLYQQIIEK--DKCQQQNARKLQ 376 Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351 +G +IR+Y V D R E + L G+ LD ++ L Sbjct: 377 VGTRAQSERIRTYNF-TQDRVTDHRIAYEVRDIKEFLRGEKCLDQLIERLL 426 >gi|149730260|ref|XP_001492759.1| PREDICTED: similar to Mitochondrial translational release factor 1 [Equus caballus] Length = 446 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 99/325 (30%), Positives = 152/325 (46%), Gaps = 19/325 (5%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 + L R L + +EIQ+ L + + Q L+ + + Sbjct: 105 RSLNRRHAELAPLAAIYREIQEAEQAIEELESMCKSLNKQDEKQLQELALEERQTVAQKL 164 Query: 103 QFESL-------LSGEADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTE 153 + D ND LEV +G GG Q + + MY ++ +++K E Sbjct: 165 NALYRELFQSLVPKEKYDKNDVILEVTSGRTTGGDICQQFTREIFDMYQNYSSYKRWKFE 224 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH--TSFSSIWV 211 L + G+ A I G + Y LK E G+HR+ RI +SR + + + Sbjct: 225 LLNYTPADYGGLHHAAARISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVI 284 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 D +++++ D RIDT+RA GAGGQHVNTTDSAVR+ H+PTG+VV+CQQERSQ K Sbjct: 285 VLPQPDEVDVKVDPKDLRIDTFRAKGAGGQHVNTTDSAVRLVHVPTGLVVECQQERSQIK 344 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW---GRQIRSYVLQPYQMVKDLRT 328 NK A +LRA+LY+ ++K + + K ++G +IR+Y V D R Sbjct: 345 NKEIALRVLRARLYQQIIEK--DKRQQQSARKLQVGTRAQSERIRTYNF-TQDRVTDHRI 401 Query: 329 NIEKTSPSDVLDGD--LDDFMKATL 351 E + + L G+ LD ++ L Sbjct: 402 AYEVRNIKEFLHGEKCLDHLIQRLL 426 >gi|78042486|ref|NP_001030185.1| peptide chain release factor 1, mitochondrial precursor [Bos taurus] gi|118573310|sp|Q3MHI7|RF1M_BOVIN RecName: Full=Peptide chain release factor 1, mitochondrial; Short=MRF-1; Short=MtRF-1; Flags: Precursor gi|75773697|gb|AAI05225.1| Mitochondrial translational release factor 1 [Bos taurus] gi|296481791|gb|DAA23906.1| peptide chain release factor 1, mitochondrial precursor [Bos taurus] Length = 447 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 101/325 (31%), Positives = 150/325 (46%), Gaps = 19/325 (5%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 + L R L KEIQ+ L + + Q L+ + + Sbjct: 106 RSLTRRHAELAPLAVIYKEIQEAEQAIEELESMCKSLNKQDEKQLQELALEERQTIAQKI 165 Query: 103 QFESL-------LSGEADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTE 153 + D ND LEV +G GG Q + + MY ++ + ++ E Sbjct: 166 NMLYSELFQSLLPKEKYDKNDVILEVTSGRTTGGDICQQFTREIFDMYQNYSSYKHWRFE 225 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH--TSFSSIWV 211 L + G+ A I G N Y LK E G+HR+ RI +SR + + + Sbjct: 226 LLNYTPADYGGLHHAAARISGDNVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVI 285 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 D +++++ D RIDT+RA GAGGQHVNTTDSAVR+ HIPTG+VV+CQQERSQ K Sbjct: 286 VLPHPDEVDVKVDPKDLRIDTFRAKGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQIK 345 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW---GRQIRSYVLQPYQMVKDLRT 328 NK A +LRA+LY+ ++K + + K ++G +IR+Y V D R Sbjct: 346 NKEIALRVLRARLYQQIIEK--DKCQQRSARKLQVGTRAQSERIRTYNF-TQDRVTDHRI 402 Query: 329 NIEKTSPSDVLDGD--LDDFMKATL 351 E + + L G+ LD ++ L Sbjct: 403 AYEVRNIKEFLCGEKCLDQLIQRLL 427 >gi|91081965|ref|XP_967739.1| PREDICTED: similar to AGAP012082-PA, partial [Tribolium castaneum] Length = 383 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 103/310 (33%), Positives = 152/310 (49%), Gaps = 14/310 (4%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL-- 108 L I+ + E +D + + L EL E+DD + L + Sbjct: 66 QLQPLINALNERKDAVENIQNLSELLNEKDDDIRKLAEEEKLTFESRIKSIDEKLLEAIL 125 Query: 109 --SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 E + N LEV+AG GG E+ +AN L MY +AE + ++T+ + + GI+ Sbjct: 126 PSDKEDECNSIVLEVNAGVGGQEAMLFANELFEMYCNFAEHQGWETQIADYSPVDIGGIR 185 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 A+ LI GP + + K E GVHR+ RI + R HTS S+ V IE+ I Sbjct: 186 HASALINGPQVFQFFKHEAGVHRVQRIPTTEKAGRIHTSTVSV-VALPQPTEIEVNIDNK 244 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D +I+T RASGAGGQHVNTT+SAVR+TH+PTG V+CQ +RSQ KN+ A LRA +Y+ Sbjct: 245 DLKIETKRASGAGGQHVNTTESAVRVTHLPTGFSVECQVDRSQVKNRQIALAKLRALIYQ 304 Query: 287 LELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGD 342 +L+++ K ++ +IR+Y P + D R + L G+ Sbjct: 305 RDLEEQIARNENM--RKNQVRSNFRNEKIRTYNF-PQDRITDHRLQGCNVHNLKGFLQGN 361 Query: 343 --LDDFMKAT 350 L +K Sbjct: 362 DALGSLIKKL 371 >gi|270007320|gb|EFA03768.1| hypothetical protein TcasGA2_TC013879 [Tribolium castaneum] Length = 387 Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats. Identities = 103/310 (33%), Positives = 152/310 (49%), Gaps = 14/310 (4%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL-- 108 L I+ + E +D + + L EL E+DD + L + Sbjct: 66 QLQPLINALNERKDAVENIQNLSELLNEKDDDIRKLAEEEKLTFESRIKSIDEKLLEAIL 125 Query: 109 --SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 E + N LEV+AG GG E+ +AN L MY +AE + ++T+ + + GI+ Sbjct: 126 PSDKEDECNSIVLEVNAGVGGQEAMLFANELFEMYCNFAEHQGWETQIADYSPVDIGGIR 185 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 A+ LI GP + + K E GVHR+ RI + R HTS S+ V IE+ I Sbjct: 186 HASALINGPQVFQFFKHEAGVHRVQRIPTTEKAGRIHTSTVSV-VALPQPTEIEVNIDNK 244 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D +I+T RASGAGGQHVNTT+SAVR+TH+PTG V+CQ +RSQ KN+ A LRA +Y+ Sbjct: 245 DLKIETKRASGAGGQHVNTTESAVRVTHLPTGFSVECQVDRSQVKNRQIALAKLRALIYQ 304 Query: 287 LELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGD 342 +L+++ K ++ +IR+Y P + D R + L G+ Sbjct: 305 RDLEEQIARNENM--RKNQVRSNFRNEKIRTYNF-PQDRITDHRLQGCNVHNLKGFLQGN 361 Query: 343 --LDDFMKAT 350 L +K Sbjct: 362 DALGSLIKKL 371 >gi|326436517|gb|EGD82087.1| peptide chain release factor 2 [Salpingoeca sp. ATCC 50818] Length = 449 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 108/352 (30%), Positives = 168/352 (47%), Gaps = 25/352 (7%) Query: 16 WDNAVQRLSFLNT---KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 D ++R L T + + + + D D + L Sbjct: 81 LDRVLERRRDLQTTIVRLAEEG---DSESVVEKTQLLAKTDALAEAASAWFDLSKEMEEL 137 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGT 128 + E D + L+ ++ + + +AD A +E+ AG GGT Sbjct: 138 EHMQRTETDPDLKAMAVSELKEVRARAPEVEQLLLSAMVPHDDADDGSAIVEIRAGTGGT 197 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE----EAGIKSATLLIKGPNAYGWLKGE 184 E+ +A L ++Y A +R ++ + + E + G+K T + G +A+G LK E Sbjct: 198 EAAIFAKDLYKLYQHLAVRRGWRVQEMTTSYTEGVGSDDGLKEVTFSVNGQDAFGSLKFE 257 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ ++ R HTS +++ V P + + I E D ++DTYR+ GAGGQHVN Sbjct: 258 SGVHRVQRVPITEAAGRIHTSTATVAVLP-QASEVTVSIHERDIKMDTYRSGGAGGQHVN 316 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVR+THIPTG+VV Q ERSQH+N+ A M+RA++Y+ E +K E + Sbjct: 317 TTDSAVRLTHIPTGIVVAVQSERSQHRNRDVAMKMIRARVYQQEREK--AQLERAEQRRA 374 Query: 305 EIG-----WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350 IG +IR+Y P V D R N+ + S S VL+ D LD + + Sbjct: 375 LIGGTPGSRSDRIRTYNF-PQDRVTDHRVNV-RASLSSVLEDDGLDGIISSL 424 >gi|255083621|ref|XP_002508385.1| predicted protein [Micromonas sp. RCC299] gi|226523662|gb|ACO69643.1| predicted protein [Micromonas sp. RCC299] Length = 366 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 115/325 (35%), Positives = 167/325 (51%), Gaps = 22/325 (6%) Query: 16 WDNAVQRLSFLNTKT-EDPHLWQNVIEAKML---MRERQHLDNAISFIKEIQDRLCDNLI 71 + R L DP A + +E + + +++R + Sbjct: 9 LEAVSARHDALVAALVADP-----PPRAAEIARINKELARAERVVRAYAAVKERRHETAS 63 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG------EADSNDAYLEVHAGA 125 L ++ E + LE E L+ EAD + LEV AGA Sbjct: 64 LEQVIAESAGVDAEMAQMAEDELATLEETTPALEETLAHLLLPADEADDSGVILEVRAGA 123 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A LLRMY +A K ++ E + + E G+K AT + G + YG LK E Sbjct: 124 GGDEAALFAADLLRMYEMFARKTGWRFELVAANASEAGGVKEATASLAGDDVYGRLKFES 183 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ ++ R HTS +S+ V P +++E++I + D +IDT RASGAGGQHVNT Sbjct: 184 GVHRVQRVPATETQGRVHTSTASVAVLP-QAETVELDIRDDDLKIDTMRASGAGGQHVNT 242 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T+SAVRITH+PTGV V Q ERSQHKNK +A +LRA++YELE +K + + ++ Sbjct: 243 TNSAVRITHVPTGVTVVMQDERSQHKNKEKAMKVLRARVYELERRKLADAR--ADQRRSL 300 Query: 306 IGWG---RQIRSYVLQPYQMVKDLR 327 IG G ++R+Y + VKD R Sbjct: 301 IGSGDRSERVRTYNYK-EGRVKDHR 324 >gi|301760227|ref|XP_002915915.1| PREDICTED: peptide chain release factor 1, mitochondrial-like [Ailuropoda melanoleuca] gi|281349098|gb|EFB24682.1| hypothetical protein PANDA_003948 [Ailuropoda melanoleuca] Length = 445 Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats. Identities = 102/325 (31%), Positives = 151/325 (46%), Gaps = 19/325 (5%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 K L R L + +EIQ+ L + + Q L+ + + Sbjct: 104 KSLNRRHAELAPLAAIYQEIQEAEQAIEELDSMCKSLNKQDEKQLQELALEERQTIAQKI 163 Query: 103 QFES-------LLSGEADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTE 153 + + D ND LEV AG GG Q + + MY ++ + +K E Sbjct: 164 NMLYSELFQSLVPKEKYDKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYSSYKNWKFE 223 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH--TSFSSIWV 211 L + G+ A I G + Y LK E G+HR+ RI +SR + + + Sbjct: 224 LLNYTPADYGGLHHAAARISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVI 283 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 D +++++ D RIDT+RA GAGGQHVNTTDSAVR+ HIPTG+VV+CQQERSQ K Sbjct: 284 VLPQPDEVDVKVDPKDLRIDTFRAKGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQIK 343 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW---GRQIRSYVLQPYQMVKDLRT 328 NK A +LRA+LY+ ++K + + K ++G +IR+Y V D R Sbjct: 344 NKEIALRVLRARLYQQIIEK--DKCQQQSTRKLQVGTRAQSERIRTYNF-TQDRVTDHRI 400 Query: 329 NIEKTSPSDVLDGD--LDDFMKATL 351 E + L G+ LD ++ L Sbjct: 401 AYEVRDIKEFLCGEKCLDQLIQTLL 425 >gi|270132345|ref|NP_666072.3| peptide chain release factor 1, mitochondrial precursor [Mus musculus] gi|27151667|sp|Q8K126|RF1M_MOUSE RecName: Full=Peptide chain release factor 1, mitochondrial; Short=MRF-1; Short=MtRF-1; Flags: Precursor gi|20810364|gb|AAH28898.1| Mitochondrial translational release factor 1 [Mus musculus] gi|26336078|dbj|BAC31724.1| unnamed protein product [Mus musculus] gi|148703819|gb|EDL35766.1| mitochondrial translational release factor 1, isoform CRA_a [Mus musculus] Length = 446 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 100/351 (28%), Positives = 159/351 (45%), Gaps = 21/351 (5%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 ++ + L+ + + +N + + L R L + +EIQ+ L L Sbjct: 81 EDLNKEYQTLDQCLQ--GISENEGDRRALHRRHAQLAPLAAVYQEIQEAEQAIEELESLC 138 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFES-------LLSGEADSNDAYLEVHAG--AGG 127 + Q + ++ + + + D +D LEV +G GG Sbjct: 139 KSLNKQDEKQLQELVSEERQIIDQKIHRLYSELLERLVPKEKYDWSDVILEVTSGRTTGG 198 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 Q + + MY ++ + +K E L + G+ A I G + Y LK E G+ Sbjct: 199 DICQQFTREIFDMYQNYSYYKHWKFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 258 Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 HR+ RI +SR + + + D +++++ D R+DT+RA GAGGQHVNT Sbjct: 259 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKVDPKDLRVDTFRARGAGGQHVNT 318 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVR+ HIPTG+VV+CQQERSQ KNK A +LRA+LY+ ++K K + Sbjct: 319 TDSAVRLVHIPTGLVVECQQERSQLKNKEIALRVLRARLYQQIIEKDRCQQQNA--RKLQ 376 Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351 +G +IR+Y V D R E + L G+ LD ++ L Sbjct: 377 VGTRAQSERIRTYNF-TQDRVTDHRIAYEVRDIKEFLRGEKCLDQLIERLL 426 >gi|149003372|ref|ZP_01828261.1| peptide chain release factor 2 [Streptococcus pneumoniae SP14-BS69] gi|147758555|gb|EDK65553.1| peptide chain release factor 2 [Streptococcus pneumoniae SP14-BS69] Length = 145 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 71/143 (49%), Positives = 98/143 (68%) Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P +DD+IE+EI E D ++DT+R+ GAGGQ+VN + VR+THIPTG+VVQ +R+Q+ Sbjct: 1 MPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 60 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 N+ +A ML+AKLY++E +K+ + + K EI WG QIRSYV PY MVKD RT+ E Sbjct: 61 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 120 Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354 V+DGDLD F+ A L + Sbjct: 121 VAQVDKVMDGDLDGFIDAYLKWR 143 >gi|47096965|ref|ZP_00234541.1| peptide chain release factor 1 [Listeria monocytogenes str. 1/2a F6854] gi|47014675|gb|EAL05632.1| peptide chain release factor 1 [Listeria monocytogenes str. 1/2a F6854] Length = 314 Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats. Identities = 87/276 (31%), Positives = 142/276 (51%), Gaps = 5/276 (1%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R LN DP + + + L +E+ + + +E ++ EL Sbjct: 5 LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQINETKEL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E+ D + + + ++ E + + D + LE+ AGG E+ Sbjct: 65 LGEKLDDEMREMAKEEFAELQKEKADLEERLKLLLVPKDPNDDKNVILEIRGAAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A L RMY+++AE R +K E ++ + G K ++ G +A+ +K E G HR+ Sbjct: 125 LFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQ 184 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R+ +S R HTS +++ + P + +EIE+ + D R DT+ ++GAGGQ VNTT SAVR Sbjct: 185 RVPETESGGRIHTSTATVAILP-EAEEVEIELHDKDIRTDTFASTGAGGQSVNTTMSAVR 243 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 +THIPTG+VV Q ERSQ KNK +A +LRA++Y+ Sbjct: 244 LTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDK 279 >gi|291393031|ref|XP_002713016.1| PREDICTED: mitochondrial translational release factor 1 [Oryctolagus cuniculus] Length = 446 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 103/351 (29%), Positives = 161/351 (45%), Gaps = 21/351 (5%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 ++ + L+ + + + K L R L + +EI + L + Sbjct: 81 EDLHKEYQTLDECLQRISV-NDGGR-KSLTRRHAELAPLAAIYQEILEAQQAIEELESMC 138 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFES-------LLSGEADSNDAYLEVHAG--AGG 127 + Q + L+ + E + + D ND LEV +G GG Sbjct: 139 KSLNTQDEKQLQALALEERQTIDEKLNMLYSELFQNLVPKEKYDKNDVILEVISGRTTGG 198 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 Q + + MY ++ + +K E L E G+ A I G + Y LK E G+ Sbjct: 199 DICQQFTREIFDMYQNYSCYKHWKFELLNYTPAEYGGLHHAAARISGDSVYKHLKYEGGI 258 Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 HR+ RI +SR + + + D +++++ D RIDT+RA GAGGQHVNT Sbjct: 259 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKVDPKDLRIDTFRAKGAGGQHVNT 318 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVR+ HIPTG+VV+CQQERSQ KNK A ++LRA+LY+ ++K + + K + Sbjct: 319 TDSAVRLVHIPTGLVVECQQERSQIKNKEIALHVLRARLYQQIIEK--DKCQQQSARKLQ 376 Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351 +G +IR+Y V D R + E + L G+ LD ++ L Sbjct: 377 VGTRAQSERIRTYNF-TQDRVTDHRISYEVRDIKEFLCGEKCLDQLIQRLL 426 >gi|158300556|ref|XP_320444.4| AGAP012082-PA [Anopheles gambiae str. PEST] gi|157013216|gb|EAA00433.4| AGAP012082-PA [Anopheles gambiae str. PEST] Length = 384 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 105/326 (32%), Positives = 166/326 (50%), Gaps = 14/326 (4%) Query: 40 IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL-ALEEDDCSILQETSDNLQRIKLE 98 + ++ L N + ++ + + + L EL ++D+ L + L Sbjct: 49 QRTRKDIQRMLLLSNVVEMYEQRKIIVDNLSSLKELKDDKDDEMVQLLKEEREAYGSILF 108 Query: 99 VEYKQFES---LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + + + E D +EV AG GG E+ +A L MY + E + ++ E L Sbjct: 109 RLDSEILNGILSMDDEEDYGSLIMEVTAGVGGQEAMLFARELFDMYCGYVEYKGWEVEML 168 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 + + + G + AT +I GP+AY +LK E GVHR+ RI + + R HTS ++ + P Sbjct: 169 QTENTDIGGTRHATTVISGPDAYRYLKHEGGVHRVQRIPATEKSGRIHTSTVTVSIIPRP 228 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DD ++E+ E D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+CQ ERSQ KN+ Sbjct: 229 DDF-QVELKEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGIAVECQTERSQQKNREI 287 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRT-NIE 331 A L AKL ++EL+ R + K+++G +IR+Y + D R Sbjct: 288 AKQKLTAKLMQIELEARFSSTQALK--KSQVGQSLRNEKIRTYNFN-QDRITDHRIEGGT 344 Query: 332 KTSPSDVLDG--DLDDFMKATLAIKK 355 + L+G LDD ++ ++ Sbjct: 345 AHNLKGFLEGGEQLDDMIEKLRRSQR 370 >gi|294994856|ref|ZP_06800547.1| peptide chain release factor 1 [Mycobacterium tuberculosis 210] Length = 206 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 81/200 (40%), Positives = 113/200 (56%), Gaps = 7/200 (3%) Query: 162 EAGIKSATLLIKG-----PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 G K ATL I + +K E GVHR+ R+ +S R HTS + + VYP + Sbjct: 1 MGGYKDATLAIASKADTPDGVWSRMKFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPE 60 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + +++I ESD RID +R+SG GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ +NK +A Sbjct: 61 EVGQVQIDESDLRIDVFRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKTRA 120 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 +L A+L + ++ A+ +S+ + +IR+Y P + D R + + Sbjct: 121 LQVLAARLQAMAEEQALADASADRASQIRTVDRSERIRTYNF-PENRITDHRIGYKSHNL 179 Query: 336 SDVLDGDLDDFMKATLAIKK 355 VLDGDLD A A K Sbjct: 180 DQVLDGDLDALFDALSAADK 199 >gi|297693940|ref|XP_002824258.1| PREDICTED: peptide chain release factor 1, mitochondrial-like isoform 1 [Pongo abelii] gi|297693942|ref|XP_002824259.1| PREDICTED: peptide chain release factor 1, mitochondrial-like isoform 2 [Pongo abelii] Length = 445 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 100/351 (28%), Positives = 156/351 (44%), Gaps = 21/351 (5%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 +N + L + + N + L R L + +EIQ+ L + Sbjct: 80 ENLSKEYQTLEQCLQHIPV--NEENQRSLNRRHAELAPLAAIYQEIQETEQAIEELESMC 137 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFES-------LLSGEADSNDAYLEVHAG--AGG 127 + Q L+ + + + + D ND LEV AG GG Sbjct: 138 KSLNKQDEKQLQELALEERQAIDQKINMLYNELFQSLVPKEKYDKNDVILEVAAGRTTGG 197 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 Q + + MY ++ + ++ E L + G+ A I G Y LK E G+ Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGI 257 Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 HR+ RI +SR + ++ + D +++++ D RIDT+RA G GGQHVN Sbjct: 258 HRVQRIPEVGLSSRMQRIHTGTTSVIVLPQPDEVDVKLDPKDLRIDTFRAKGPGGQHVNK 317 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVR+ HIPTG+VV+CQQERSQ KNK A+ +LRA+LY+ ++K + + K + Sbjct: 318 TDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEK--DKRQQQSARKLQ 375 Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351 +G +IR+Y + D R E + L G LD ++ L Sbjct: 376 VGTRAQSERIRTYNF-TQDRISDHRIAYEVRDIKEFLCGGKGLDQLIQRLL 425 >gi|313636342|gb|EFS02127.1| peptide chain release factor 2 [Listeria seeligeri FSL S4-171] Length = 142 Score = 153 bits (386), Expect = 4e-35, Method: Composition-based stats. Identities = 82/139 (58%), Positives = 100/139 (71%) Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 DD IEIE+ D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ KN+ Q Sbjct: 2 DDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQLKNRDQ 61 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A ML+ KLY+ E +++E + EIGWG QIRSYV PY MVKD RTN E + Sbjct: 62 AMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNYETGNI 121 Query: 336 SDVLDGDLDDFMKATLAIK 354 V+DGDLDDF+ A L + Sbjct: 122 QAVMDGDLDDFINAYLRSR 140 >gi|193786181|dbj|BAG51464.1| unnamed protein product [Homo sapiens] Length = 445 Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 102/351 (29%), Positives = 156/351 (44%), Gaps = 21/351 (5%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 +N + L + + N + L R L + +EIQ+ L + Sbjct: 80 ENLSKEYQTLEQCLQHIPV--NEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMC 137 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFES-------LLSGEADSNDAYLEVHAG--AGG 127 + Q L+ + + + + D ND LEV AG GG Sbjct: 138 KSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 197 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 Q + + MY ++ + ++ E L + G+ A I G Y LK E G+ Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADNGGLHHAAARISGDGVYKHLKYEGGI 257 Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 HR+ RI +SR + + + D +++++ D RIDT+RA GAGGQHVN Sbjct: 258 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHVNK 317 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVR+ HIPTG+VV+CQQERSQ KNK A+ +LRA+LY+ ++K + + K + Sbjct: 318 TDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEK--DKRQQQSARKLQ 375 Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351 +G +IR+Y V D R E + L G LD ++ L Sbjct: 376 VGTRAQSERIRTYNF-TQDRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLL 425 >gi|332241803|ref|XP_003270069.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 1 [Nomascus leucogenys] gi|332241805|ref|XP_003270070.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 2 [Nomascus leucogenys] Length = 445 Score = 153 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 103/351 (29%), Positives = 159/351 (45%), Gaps = 21/351 (5%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 +N + L + + N + L R L + +EIQ+ L + Sbjct: 80 ENLSKEYQTLEQCLQHIPV--NEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMC 137 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFES-------LLSGEADSNDAYLEVHAG--AGG 127 + Q L+ + + + + D ND LEV AG GG Sbjct: 138 KSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 197 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 Q + + MY ++ + ++ E L + G+ A I G + Y LK E G+ Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 257 Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 HR+ RI +SR + + + D ++++++ D RIDT+RA GAGGQHVNT Sbjct: 258 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLNPKDLRIDTFRAKGAGGQHVNT 317 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVR+ HIPTG+VV+CQQERSQ KNK A+ +LRA+LY+ ++K + + K + Sbjct: 318 TDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEK--DRRQQQSARKLQ 375 Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351 +G +IR+Y V D R E + L G LD ++ L Sbjct: 376 VGTRAQSERIRTYNF-TQDRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLL 425 >gi|145485050|ref|XP_001428534.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124395620|emb|CAK61136.1| unnamed protein product [Paramecium tetraurelia] Length = 390 Score = 153 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 103/346 (29%), Positives = 173/346 (50%), Gaps = 21/346 (6%) Query: 19 AVQRLSFLNTKTE---DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72 QRL LNT+ E D + ++ E K R L I K+IQ + D L Sbjct: 30 INQRLGELNTEYETYQDQTIKGDMNEIKR--RRMNELQPKIHIYKQIQASVSVIEDAKQL 87 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTES 130 + + D+ S+L E + + + L+ + +EV AG GG+E Sbjct: 88 IGMGGSSDEISMLNEEIQSQIEYLKKYQDDALSQLIEEDEYDHIRQLNVEVRAGVGGSEG 147 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEE--AGIKSATLLIKGPNAYGWLKGEQGVH 188 +A ++ M +A + + + I + G K+ L I G N Y LK E GVH Sbjct: 148 SLFAEDIIGMIQNYASLQNWDCRVISIQKDNQIGKGCKTGILQINGENVYQHLKCESGVH 207 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 +++R+ ++ R H+S +S+ V P + +S+ D R + RASG GGQHVN T+S Sbjct: 208 KVIRVPETEAKGRLHSSTASMIVLP--KVTDSFHLSDKDLRYEYMRASGPGGQHVNKTES 265 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI-- 306 A RITH+PTG+ V ++RSQ +NK +A+ +LR KL+ + +Q+++E + ++ K+++ Sbjct: 266 ACRITHVPTGIQVVNMEDRSQERNKQRAYQILRDKLFAIHVQEKQE--RMAQTRKSQVTG 323 Query: 307 -GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350 +IR+Y P + + D RTN+ +L G+ L +F++ Sbjct: 324 SDRSDKIRTYNF-PQERITDHRTNLTLYGMEKMLSGELLGEFIQKY 368 >gi|34577120|ref|NP_004285.2| peptide chain release factor 1, mitochondrial precursor [Homo sapiens] gi|114651371|ref|XP_509647.2| PREDICTED: peptide chain release factor 1, mitochondrial isoform 5 [Pan troglodytes] gi|114651373|ref|XP_001150158.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 3 [Pan troglodytes] gi|114651375|ref|XP_001150218.1| PREDICTED: mitochondrial translational release factor 1 isoform 4 [Pan troglodytes] gi|62512140|sp|O75570|RF1M_HUMAN RecName: Full=Peptide chain release factor 1, mitochondrial; Short=MRF-1; Short=MtRF-1; Flags: Precursor gi|27503783|gb|AAH42196.1| Mitochondrial translational release factor 1 [Homo sapiens] gi|55958420|emb|CAI16615.1| mitochondrial translational release factor 1 [Homo sapiens] gi|119629053|gb|EAX08648.1| mitochondrial translational release factor 1, isoform CRA_a [Homo sapiens] gi|119629054|gb|EAX08649.1| mitochondrial translational release factor 1, isoform CRA_a [Homo sapiens] gi|119629056|gb|EAX08651.1| mitochondrial translational release factor 1, isoform CRA_a [Homo sapiens] gi|119629058|gb|EAX08653.1| mitochondrial translational release factor 1, isoform CRA_a [Homo sapiens] Length = 445 Score = 153 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 102/351 (29%), Positives = 156/351 (44%), Gaps = 21/351 (5%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 +N + L + + N + L R L + +EIQ+ L + Sbjct: 80 ENLSKEYQTLEQCLQHIPV--NEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMC 137 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFES-------LLSGEADSNDAYLEVHAG--AGG 127 + Q L+ + + + + D ND LEV AG GG Sbjct: 138 KSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 197 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 Q + + MY ++ + ++ E L + G+ A I G Y LK E G+ Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGI 257 Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 HR+ RI +SR + + + D +++++ D RIDT+RA GAGGQHVN Sbjct: 258 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHVNK 317 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVR+ HIPTG+VV+CQQERSQ KNK A+ +LRA+LY+ ++K + + K + Sbjct: 318 TDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEK--DKRQQQSARKLQ 375 Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351 +G +IR+Y V D R E + L G LD ++ L Sbjct: 376 VGTRAQSERIRTYNF-TQDRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLL 425 >gi|294623963|ref|ZP_06702760.1| peptide chain release factor 2 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292601738|gb|EFF45678.1| peptide chain release factor 2 [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 178 Score = 153 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 85/145 (58%), Positives = 109/145 (75%), Gaps = 1/145 (0%) Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 ++V P VDD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT VV CQ RS Sbjct: 1 MFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRS 60 Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328 QH+N+ A ML AKLYELE+QKR + E++K++IGWG QIR+YVL +KDLRT Sbjct: 61 QHQNRDNAMKMLAAKLYELEVQKRNVERDALEATKSDIGWGSQIRNYVLD-QSRIKDLRT 119 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353 IE++ VLDGDLD+F++A+L Sbjct: 120 GIERSDTQKVLDGDLDEFVEASLKA 144 >gi|241954572|ref|XP_002420007.1| peptide chain release factor, mitochondrial precursor, putative [Candida dubliniensis CD36] gi|223643348|emb|CAX42223.1| peptide chain release factor, mitochondrial precursor, putative [Candida dubliniensis CD36] Length = 392 Score = 153 bits (385), Expect = 5e-35, Method: Composition-based stats. Identities = 92/346 (26%), Positives = 146/346 (42%), Gaps = 21/346 (6%) Query: 17 DNAVQRLSFLNTKTED---PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 Q L+ K D P L ++ L+ E+ + D Sbjct: 53 QTIQQEHKELSEKLADKYIPDLQVKFDNYTNILSMFGKLETLTQEYIELTEITDD----- 107 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 + + S + +I+ V + + +E+ G GG E+ + Sbjct: 108 ---PGLYKEAQEELKSIVIPQIEKLVSELTVKLRPPVKYADKGCIIELRPGVGGNEASLF 164 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 LL MY +A + +K + + I A L I +Y ++ E GVHR+ RI Sbjct: 165 TGDLLNMYINFASEMNWKYKIISEGKNSSGFINEAILSIDTLGSYDIMRHESGVHRVQRI 224 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRIDTYRASGAGGQHVNTT 246 ++ R HTS S++ V P + + E + + RIDT RA G GGQHVNTT Sbjct: 225 PETETKGRVHTSTSAVVVLPKLSEGNESSLKDDERVFAPGEVRIDTMRAGGKGGQHVNTT 284 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TE 305 DSAVR+ HIPTG++V Q ERSQ NKA+A+ +LR++L + E ++ + + + Sbjct: 285 DSAVRLVHIPTGMIVIQQDERSQPLNKAKAFAILRSRLAQKEQEEEILRQKKLRTDQVSS 344 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKAT 350 +I++Y + V D R N VL+G L + Sbjct: 345 TDRSDKIKTYNYK-ENRVTDHRINYSMHDLQGVLEGRKLGQLIDTY 389 >gi|194040714|ref|XP_001926694.1| PREDICTED: peptide chain release factor 1, mitochondrial-like isoform 1 [Sus scrofa] gi|311266318|ref|XP_003131053.1| PREDICTED: peptide chain release factor 1, mitochondrial-like isoform 2 [Sus scrofa] Length = 446 Score = 152 bits (384), Expect = 6e-35, Method: Composition-based stats. Identities = 101/325 (31%), Positives = 150/325 (46%), Gaps = 19/325 (5%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 + L R L KEIQ+ L + + Q L+ + + Sbjct: 105 RSLNRRHAELAPLAVIYKEIQEAEQAIEELESMCKSLNKQDEKQLQELALEEKRTIAQKI 164 Query: 103 QFES-------LLSGEADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTE 153 + + D ND LEV +G GG Q + + MY ++ + + E Sbjct: 165 NMLYHELFQSLVPKEKYDKNDVILEVTSGRTTGGDICQQFTREIFDMYQNYSSYKHWTFE 224 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH--TSFSSIWV 211 L + G+ A I G N Y LK E G+HR+ RI +SR + + + Sbjct: 225 LLNYTPADYGGLHHAAARISGANVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVI 284 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 D +++++ D RIDT+RA GAGGQHVNTTDSAVR+ H+PTG+VV+CQQERSQ K Sbjct: 285 VLPQPDEVDVKVDPKDLRIDTFRAKGAGGQHVNTTDSAVRLVHVPTGLVVECQQERSQIK 344 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW---GRQIRSYVLQPYQMVKDLRT 328 NK A +LRA+LY+ ++K E + K ++G +IR+Y V D R Sbjct: 345 NKEIALRVLRARLYQQIIEK--EKCQQQSARKLQVGTRAQSERIRTYNF-TQDRVTDHRI 401 Query: 329 NIEKTSPSDVLDGD--LDDFMKATL 351 E + + L G+ LD ++ L Sbjct: 402 AYEVRNIKEFLCGEKCLDLLIQRLL 426 >gi|315047700|ref|XP_003173225.1| peptide chain release factor 1 [Arthroderma gypseum CBS 118893] gi|311343611|gb|EFR02814.1| peptide chain release factor 1 [Arthroderma gypseum CBS 118893] Length = 438 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 86/341 (25%), Positives = 153/341 (44%), Gaps = 31/341 (9%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 + + L + +++ L L E + L+ +++ + Sbjct: 71 RAAAKRIGELAPVANALRDWDTAHESITELQGLVNEPSTDAELKSLAEDDITTTIGTLSS 130 Query: 103 -----QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157 + + +E+ GAGG E+ +A +LRMYT + R +T +++ Sbjct: 131 LSATLKRALIPRHPFADMPCLIEIRPGAGGDEAGLFAAEMLRMYTSFCSSRGLRTTIIKM 190 Query: 158 HDGEEAG------IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 + AG + + ++ P +Y L+ E GVHR+ R+ ++ R HTS S+ + Sbjct: 191 EAEDGAGAGAEDRLSEVVMEVETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMI 250 Query: 212 YP-------------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 P D + + ++ D + + +RASGAGGQHVN T+SAVR+TH+PTG Sbjct: 251 LPSFPESNQEDSPLNFDDPNSDYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHVPTG 310 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRS 314 V+ Q RSQH+N+ +AW +LRAKL + + RE+ + G G +IR+ Sbjct: 311 TVISMQDSRSQHENRRKAWLLLRAKLAQARREAREQEMMELRRGAMGGVNKTGRGDKIRT 370 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353 Y D R+ + + V+DG +L+ +++ Sbjct: 371 YNF-TQSRCTDHRSGMTVHNIGKVMDGGENLEKIIESVQNW 410 >gi|73989054|ref|XP_848713.1| PREDICTED: similar to mitochondrial translational release factor 1 isoform 2 [Canis familiaris] Length = 444 Score = 152 bits (384), Expect = 7e-35, Method: Composition-based stats. Identities = 102/325 (31%), Positives = 150/325 (46%), Gaps = 19/325 (5%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 K L R L + +EIQ+ L + Q L+ + E Sbjct: 103 KSLNRRHAELAPLAAIYQEIQEAEQAIEELDSMCKSLSKQDEKQLQELALEERQTIAEKI 162 Query: 103 QFES-------LLSGEADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTE 153 + + D ND +EV +G GG Q + + MY ++ + +K E Sbjct: 163 NVLYSELFQSLVPKEKYDKNDVIIEVTSGRTTGGDICQQFTREIFDMYQNYSSYKNWKFE 222 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH--TSFSSIWV 211 L + G+ A I G N Y LK E GVHR+ RI ++R + + + Sbjct: 223 LLNYTPADYGGLHHAAARISGDNVYKHLKYEGGVHRVQRIPEVGLSARMQRIHTGTMSVI 282 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 D +++++ D RIDT+RA GAGGQHVNTTDSAVR+ HIPTG+VV+CQQERSQ K Sbjct: 283 VLPQPDEVDVKVDPKDLRIDTFRAKGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQIK 342 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW---GRQIRSYVLQPYQMVKDLRT 328 NK A +LRA+LY+ ++K + + K ++G +IR+Y V D R Sbjct: 343 NKEIALRVLRARLYQQIIEK--DKCQQQSTRKLQVGTRAQSERIRTYNF-TQDRVTDHRI 399 Query: 329 NIEKTSPSDVLDGD--LDDFMKATL 351 E + L G+ LD ++ L Sbjct: 400 AYEVRGIKEFLCGEKCLDQLIQRLL 424 >gi|109120568|ref|XP_001090893.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 3 [Macaca mulatta] gi|109120570|ref|XP_001090782.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 2 [Macaca mulatta] Length = 445 Score = 152 bits (383), Expect = 8e-35, Method: Composition-based stats. Identities = 103/351 (29%), Positives = 158/351 (45%), Gaps = 21/351 (5%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 +N + L + + N + L R L + +EIQ+ L + Sbjct: 80 ENLNKEYQTLEQCLQHIPV--NEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMC 137 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFES-------LLSGEADSNDAYLEVHAG--AGG 127 + Q L+ + + L + D ND LEV +G GG Sbjct: 138 KSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLLPKEKYDKNDVILEVTSGRTTGG 197 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 Q + + MY ++ + ++ E L + G+ A I G + Y LK E G+ Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 257 Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 HR+ RI +SR + + + D +++++ D RIDT+RA GAGGQHVNT Sbjct: 258 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHVNT 317 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVR+ HIPTG+VV+CQQERSQ KNK A+ +LRA+LY+ ++K + + K + Sbjct: 318 TDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEK--DKCQQRSARKLQ 375 Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351 +G +IR+Y V D R E + L G LD ++ L Sbjct: 376 VGTRAQSERIRTYNF-TQDRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLL 425 >gi|67969776|dbj|BAE01236.1| unnamed protein product [Macaca fascicularis] Length = 378 Score = 152 bits (383), Expect = 8e-35, Method: Composition-based stats. Identities = 102/351 (29%), Positives = 157/351 (44%), Gaps = 21/351 (5%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 +N + L + + N + L R L + +EIQ+ L + Sbjct: 13 ENLNKEYQTLEQCLQHIPV--NEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMC 70 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFES-------LLSGEADSNDAYLEVHAG--AGG 127 + Q L+ + + L + D ND LEV +G GG Sbjct: 71 KSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLLPKEKYDKNDVILEVTSGRTTGG 130 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 Q + + MY ++ + ++ E L + G+ A I G + Y LK E G+ Sbjct: 131 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 190 Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 HR+ RI +SR + + + D +++++ D RIDT+RA GAGGQHVNT Sbjct: 191 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHVNT 250 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T SAVR+ HIPTG+VV+CQQERSQ KNK A+ +LRA+LY+ ++K + + K + Sbjct: 251 TVSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEK--DKCQQQSARKLQ 308 Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351 +G +IR+Y V D R E + L G LD ++ L Sbjct: 309 VGTRAQSERIRTYNF-TQDRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLL 358 >gi|310796023|gb|EFQ31484.1| RF-1 domain-containing protein [Glomerella graminicola M1.001] Length = 397 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 91/342 (26%), Positives = 151/342 (44%), Gaps = 32/342 (9%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 R L + ++ ++E + L L +D + Sbjct: 35 TKTARRLGELSSVVTALREWEQATSSVAELNGLLGSKDKELRDMAAEELESTRDQLAAVS 94 Query: 103 QFES---LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159 + S LE+ G GG E + +A+ L RMY ++ ++ ++ E ++ Sbjct: 95 RRLSASLTPKDPYAHMPCLLEIRPGPGGLEGRFFADTLFRMYKQYCSRKGYRAEVIKYET 154 Query: 160 GEEAG----------IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 + AG ++ A + I P AY +GE G+HR+ RI + N R HTS ++ Sbjct: 155 ADAAGDQSTAAGESPLQEAIVEIHDPGAYDLFRGEAGMHRVQRIPATEKNGRVHTSAVAV 214 Query: 210 WVYP-------------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 WV P + + + I ++ +I+T RA GAGGQHVN T+SA+R+TH+P Sbjct: 215 WVLPSFQESGGEGGAQDMDNPESDFYIDPAEVKIETMRARGAGGQHVNKTESAIRMTHVP 274 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES---SKTEIGWGRQIR 313 TG VV Q RSQ +N+ AW ++R+++ + + REE A S+ I +IR Sbjct: 275 TGTVVSMQDSRSQSRNREDAWKLMRSRVALIRREAREEAAAQLRDSVLSQHRISRSDKIR 334 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATLAI 353 +Y V D R ++ + DV++G LD + A Sbjct: 335 TYNYN-QDRVTDHRAGLDVYNLDDVINGGESLDKIVDAVRDW 375 >gi|302820744|ref|XP_002992038.1| hypothetical protein SELMODRAFT_430253 [Selaginella moellendorffii] gi|300140160|gb|EFJ06887.1| hypothetical protein SELMODRAFT_430253 [Selaginella moellendorffii] Length = 654 Score = 152 bits (383), Expect = 9e-35, Method: Composition-based stats. Identities = 82/197 (41%), Positives = 121/197 (61%), Gaps = 4/197 (2%) Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218 GEEAGIKSATL I G AYG++ GE+G HRLVR P++S R TSF+ + V V Sbjct: 118 PGEEAGIKSATLEIDGRYAYGYISGEKGTHRLVRQLPFNSKGLRQTSFAGVEVMHVRTKL 177 Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 + ++ R+ G GGQ+VN ++AVR+THIPTG+ ++C ++RSQ +NK +A Sbjct: 178 NSTQPGQATL----CRSGGKGGQNVNMVETAVRVTHIPTGIALRCSEKRSQLQNKIKAIV 233 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 +L++KL + +R + WG+QIR+YV PY++V DLRTN+E + S + Sbjct: 234 LLKSKLLVILEDQRAAEIKEIRGDVVKAEWGQQIRNYVFHPYKLVMDLRTNVETSDISGI 293 Query: 339 LDGDLDDFMKATLAIKK 355 +DG L+ + A L K+ Sbjct: 294 MDGKLEPLLTAYLMSKQ 310 Score = 44.4 bits (103), Expect = 0.028, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 19/31 (61%) Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 DLRTN E + S ++ G+L+ + A L K+ Sbjct: 81 DLRTNTETSDISVIMGGNLEPLLTAYLMSKQ 111 >gi|3328106|gb|AAD12759.1| translational release factor 1 [Homo sapiens] Length = 445 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 101/351 (28%), Positives = 155/351 (44%), Gaps = 21/351 (5%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 +N + L + + N + L R L + +E Q+ L + Sbjct: 80 ENLSKEYQTLEQCLQHIPV--NEESRRSLNRRHAELAPLAAIYQETQETEQAIEELGSMC 137 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFES-------LLSGEADSNDAYLEVHAG--AGG 127 + Q L+ + + + + D ND LEV AG GG Sbjct: 138 KSLNKRDEKQLLELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 197 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 Q + + MY ++ + ++ E L + G+ A I G Y LK E G+ Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFEPLNYTPADYGGLHHAAARISGDGVYKHLKYEGGI 257 Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 HR+ RI +SR + + + D +++++ D RIDT+RA GAGGQHVN Sbjct: 258 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHVNK 317 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVR+ HIPTG+VV+CQQERSQ KNK A+ +LRA+LY+ ++K + + K + Sbjct: 318 TDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEK--DKRQQQSARKLQ 375 Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351 +G +IR+Y V D R E + L G LD ++ L Sbjct: 376 VGTRAQSERIRTYNF-TQDRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLL 425 >gi|149237364|ref|XP_001524559.1| peptide chain release factor 1, mitochondrial precursor [Lodderomyces elongisporus NRRL YB-4239] gi|146452094|gb|EDK46350.1| peptide chain release factor 1, mitochondrial precursor [Lodderomyces elongisporus NRRL YB-4239] Length = 392 Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats. Identities = 86/303 (28%), Positives = 141/303 (46%), Gaps = 10/303 (3%) Query: 55 AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114 + E L + L + + +E + + + +E + L + Sbjct: 70 VLKTYDEFSRILLEIRELSTIRDPDLISEAQEELQELVPKYTSIIEELNNKLLPPVKYAE 129 Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 +E+ G GG E+ + + L++MY +A + + + + L I Sbjct: 130 CGCMIELRPGVGGNEASLFTDDLMQMYLNFASIQSWPALVISRSTNSSGFVNEIILSINQ 189 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD-------DSIEIEISESD 227 P AY L+ E GVHR+ RI ++ R HTS S++ + P + + E++ + Sbjct: 190 PGAYDVLRHESGVHRVQRIPETENKGRVHTSTSAVIILPKMSDGNENSLRADEMQFKPGE 249 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 RIDT RA G GGQHVNTTDSAVR+ HIPTG++V Q ERSQ +NKA+A+ +LRA+L E Sbjct: 250 VRIDTMRAGGKGGQHVNTTDSAVRLVHIPTGIMVMQQDERSQPQNKAKAFAILRARLAEK 309 Query: 288 EL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDD 345 E ++ + S + +IR+Y P V D R + + G+ L++ Sbjct: 310 ERVEELNRQRQMRTSQVSSTDRSDKIRTYNY-PQNRVTDHRCGFSLHDIAGCMGGNKLNE 368 Query: 346 FMK 348 + Sbjct: 369 IID 371 >gi|302653122|ref|XP_003018392.1| hypothetical protein TRV_07586 [Trichophyton verrucosum HKI 0517] gi|291182035|gb|EFE37747.1| hypothetical protein TRV_07586 [Trichophyton verrucosum HKI 0517] Length = 438 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 86/341 (25%), Positives = 153/341 (44%), Gaps = 31/341 (9%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 + + + + +K+ L L E + L+ +++ + Sbjct: 71 RAAAKRIGEIAPVANALKDWDTAHESITELQGLIDEPSTDTELKSLAEDDITTTIGTLSS 130 Query: 103 -----QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157 + + +E+ GAGG E+ +A +LRMYT + R +T +++ Sbjct: 131 LSATLKRALIPRHPFADMPCLIEIRPGAGGDEAGLFAAEMLRMYTSFCSSRGLRTTIIKM 190 Query: 158 HDGEEAG------IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 + G + + ++ P +Y L+ E GVHR+ R+ ++ R HTS S+ + Sbjct: 191 EAEDGVGAGAEERLSEVVMEVETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMI 250 Query: 212 YP-------------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 P D + + ++ D + + +RASGAGGQHVN T+SAVR+THIPTG Sbjct: 251 LPSFPENNQEDSPLNFDDPNSDYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHIPTG 310 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRS 314 V+ Q RSQH+N+ +AW +LRAKL + + RE+ + G G +IR+ Sbjct: 311 TVISMQDSRSQHENRRKAWLLLRAKLAQARREAREQEMMELRRGAMGGVNKTGRGDKIRT 370 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353 Y D R+ + + V+DG +L+ +++ + Sbjct: 371 YNF-TQSRCTDHRSGMTVHNIGKVMDGGENLEKIIESVQSW 410 >gi|302901381|ref|XP_003048424.1| hypothetical protein NECHADRAFT_84223 [Nectria haematococca mpVI 77-13-4] gi|256729357|gb|EEU42711.1| hypothetical protein NECHADRAFT_84223 [Nectria haematococca mpVI 77-13-4] Length = 412 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 96/360 (26%), Positives = 161/360 (44%), Gaps = 33/360 (9%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 + L KT + + +AK + E + A+ ++ Q + + +L Sbjct: 29 QSMTSEYDEL-QKTLNASF--DSTKAKRVG-ELSRVAEALKAWEKSQASVAELTAMLNDP 84 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN--DAYLEVHAGAGGTESQDWA 134 ++ D + + KLE + + L+ +E G GG E + + Sbjct: 85 EQDADLVSIARDELESETGKLESLARNLSASLTPRHPFADFPCMIEFRPGPGGLEGRYFT 144 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAG----------IKSATLLIKGPNAYGWLKGE 184 + L +MY ++ ++ ++ + AG ++ A L I+ A+ + E Sbjct: 145 DTLFKMYKALCMRKGYRHSVMKYEFADTAGDSSSSAGENPLQEAVLEIQDQGAFDLFRSE 204 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYP-----------VVDDSIEIEISESDCRIDTY 233 G+HR+ RI +S R HTS ++WV P D + ++ D +I+ Sbjct: 205 AGMHRVQRIPSTESKGRVHTSAVAVWVLPSFPESGAGSVDFEDPESDFYVNPQDVKIEAM 264 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 RA GAGGQHVN T+SA+R+TH+PTG V Q RSQ +N+ +AW M+RA++ + + RE Sbjct: 265 RARGAGGQHVNKTESAIRMTHLPTGTTVSMQDHRSQQRNRDEAWKMMRARIADQRREARE 324 Query: 294 EIANIGES---SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMK 348 E A + SKT+I G +IR+Y D R I+ +VL+G LD M Sbjct: 325 EEAARLRNSVLSKTQITRGDKIRTYNYN-QDRCTDHRAGIDVHDLPNVLEGGEKLDRIMD 383 >gi|255945217|ref|XP_002563376.1| Pc20g08530 [Penicillium chrysogenum Wisconsin 54-1255] gi|211588111|emb|CAP86182.1| Pc20g08530 [Penicillium chrysogenum Wisconsin 54-1255] Length = 423 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 93/338 (27%), Positives = 143/338 (42%), Gaps = 29/338 (8%) Query: 44 MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK-----LE 98 + L + +KE + + L L + + + L+ + Sbjct: 67 KTAKRAGELAPVANILKEWVNANDSIVELNSLLTDPNTDAELRSLATEDLESSRDALPSI 126 Query: 99 VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT---EAL 155 + + + LE+ GAGG E+ +A +LRMY + +R + + Sbjct: 127 SDRLKKALIPRHPFADLPCLLEIRPGAGGDEAGLFAFEMLRMYVAFCSRRGLRPTILKQD 186 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-- 213 E + A + I+ AY L+ E GVHR+ R+ ++ R HTS S+ V P Sbjct: 187 TEVGPSEDRLSEAVIEIQANGAYDILRTESGVHRVQRVPATETKGRTHTSAVSVMVLPSF 246 Query: 214 ------------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 D S + I + R++ RA GAGGQHVN T+SA+R+THIPT VV Sbjct: 247 PEDTSEMDNALNFEDPSSDYYIDPQEVRVEKMRAGGAGGQHVNKTESAIRLTHIPTNTVV 306 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRSYVL 317 Q ERSQ N+ +AW +LRAKL E + RE+ ++G G +IR+Y Sbjct: 307 SMQDERSQQANRRKAWQVLRAKLAEARQEAREQELMQLRRGILGGVAKMGRGDKIRTYNF 366 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353 D RT I + +LDG L+ M + Sbjct: 367 G-QSRCTDHRTGITIHNLDGILDGGDGLETVMDSVRTW 403 >gi|323445681|gb|EGB02173.1| hypothetical protein AURANDRAFT_35500 [Aureococcus anophagefferens] Length = 268 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 106/259 (40%), Positives = 150/259 (57%), Gaps = 9/259 (3%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 + E+ ++G D D LE+ AGAGG ++Q+W M+ RMY R+ EKR F E +G+ Sbjct: 1 ELEAAMTGPYDGCDCRLEITAGAGGLDAQEWTAMVARMYARFGEKRGFSVVEAERSEGDH 60 Query: 163 AGIKSAT-LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 G L I+G NA+G +GE+G HRLVR SP++S ++R TSF+S+ P + D Sbjct: 61 PGCVKGVSLEIRGANAFGLFRGEKGAHRLVRQSPFNSAAKRQTSFASVEPTPDLPDDHPD 120 Query: 222 EI------SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 +D + T RA GAGGQ+VN ++AVR+TH+PTG+ V+C +ER+Q NKA Sbjct: 121 LPADVAELDPADLEVTTARAGGAGGQNVNKVETAVRMTHVPTGLRVRCARERTQGANKAI 180 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A MLRAKL ++R + +G +RSYVL PY++VKD E Sbjct: 181 ALTMLRAKLVAAMAEQRAATLADIRGDRVAADFGASVRSYVLHPYKLVKD--DKHETPHA 238 Query: 336 SDVLDGDLDDFMKATLAIK 354 +DVLDGDL F+ A L + Sbjct: 239 TDVLDGDLGPFLDAELRRR 257 >gi|196013797|ref|XP_002116759.1| hypothetical protein TRIADDRAFT_31311 [Trichoplax adhaerens] gi|190580737|gb|EDV20818.1| hypothetical protein TRIADDRAFT_31311 [Trichoplax adhaerens] Length = 271 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 101/248 (40%), Positives = 154/248 (62%), Gaps = 9/248 (3%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 + EAD ++A +E+ A GG E+ +A L +MY R+A R +K EAL H+ E G K A Sbjct: 4 NDEADDSNAIIEIRAATGGLEAALFAADLFQMYKRYASHRNWKFEALSFHENEVGGFKEA 63 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 I G +G +K E GVHR+ R+ +S+ R HTS +++ + P + I+I I+++D Sbjct: 64 IASIVGAGVFGEMKLESGVHRVQRVPITESDGRVHTSTATVAILP-QPEEIDIVINKNDI 122 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 + DT+RA GAGGQHVNTTDSAVR+THIPTG++V Q+E+SQH+NKA+A +L+AKL++ Sbjct: 123 KFDTFRAQGAGGQHVNTTDSAVRLTHIPTGMIVAVQEEKSQHRNKAKAIQILQAKLFD-- 180 Query: 289 LQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--L 343 Q+++ + + + +IG G +IR+Y Q + D R N+ D L G+ L Sbjct: 181 EQRQQNQTDRVHARRQQIGTGARSERIRTYNYQ-QDRITDHRINMSLYGIDDFLSGNESL 239 Query: 344 DDFMKATL 351 + M + L Sbjct: 240 NHLMSSLL 247 >gi|58260798|ref|XP_567809.1| hypothetical protein CNK01240 [Cryptococcus neoformans var. neoformans JEC21] gi|134117261|ref|XP_772857.1| hypothetical protein CNBK2280 [Cryptococcus neoformans var. neoformans B-3501A] gi|50255475|gb|EAL18210.1| hypothetical protein CNBK2280 [Cryptococcus neoformans var. neoformans B-3501A] gi|57229890|gb|AAW46292.1| hypothetical protein CNK01240 [Cryptococcus neoformans var. neoformans JEC21] Length = 480 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 99/347 (28%), Positives = 155/347 (44%), Gaps = 21/347 (6%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 N ++++ K D + + A+ + +E L + E++ + + LE + Sbjct: 114 NVYKKVTEDEAKATDIDIKSQIERAR-VQKELAPLVEVWNKYLELKQSIIEIKPFLEDSD 172 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136 E + + + L + A + ++AG GG ES Sbjct: 173 PTLRQMFEAEHASLGTELDALITSTLPIVLLPPLSTAALPAVMSLNAGVGGLESALCTED 232 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-----------AYGWLKGEQ 185 L RMY R+A R +K E + +G + YG L+ E+ Sbjct: 233 LARMYLRFATNRGWKVEEISRVEGTGGKGGGGIRELTVKFEPPQYAEEGIEVYGALQWEK 292 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ ++ R HTS ++ V P+ D+ + D RID RA GAGGQHVN Sbjct: 293 GVHRIQRVPANETQGRIHTSTVAVIVLPMYPDTAEAPLVDPKDVRIDVMRARGAGGQHVN 352 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T+SAVR+THIPTG+ V Q RSQH+N+ AW +LRA+L E + EE+ S + Sbjct: 353 RTESAVRLTHIPTGITVSMQDSRSQHQNRTWAWEILRARLS--EKKHNEEVEARRASRRD 410 Query: 305 EI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFM 347 ++ +IR+Y + D R I T VLDG+ L+D + Sbjct: 411 QVKGADRSDKIRTYNFN-QDRLTDHRFGITVTGLQHVLDGEGLEDVI 456 >gi|303310501|ref|XP_003065262.1| Peptidyl-tRNA hydrolase domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240104924|gb|EER23117.1| Peptidyl-tRNA hydrolase domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|320034924|gb|EFW16867.1| peptide chain release factor 1 [Coccidioides posadasii str. Silveira] Length = 438 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 92/340 (27%), Positives = 151/340 (44%), Gaps = 30/340 (8%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI-----KL 97 K + L + +KE L L + L+E + + + Sbjct: 68 KETAKRVGELTATVQALKEWDKAHESIAELNHLLDDPSSDPELRELASDDLQTTVSSLFA 127 Query: 98 EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157 + + +E+ GAGG E+ +A+ LLRMY + + +T L+ Sbjct: 128 LSGKLKESLIPRHPFAELPCLVEIRPGAGGDEAGLFASELLRMYLAFCSRHGLRTAILKK 187 Query: 158 HDGEEAG-------IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 + AG + A + I+ P +Y L+ E GVHR+ RI ++ R HTS S+ Sbjct: 188 DVEDGAGGSGSEDRLSEAVMEIEAPGSYNILRTEAGVHRVQRIPATEAKGRVHTSAVSVM 247 Query: 211 VYP-----------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 + P D + + I+ D + + RASGAGGQHVN T+SA+R+TH+PT Sbjct: 248 ILPSFSEQNDSALNFDDPNSDYYINPQDVQSEKMRASGAGGQHVNKTESAIRLTHVPTST 307 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRSY 315 VV Q RSQH+N+ +AW +LR+K+ ++ + RE+ +G G ++R+Y Sbjct: 308 VVAVQDSRSQHENRRKAWRLLRSKIAQMRREAREQELVELRRGIMGGVARMGRGDKVRTY 367 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353 D R+ + + VLDG LD+ M++ Sbjct: 368 NFG-QNRCTDHRSGVTIHNLGSVLDGGEGLDNIMESVSNW 406 >gi|255721217|ref|XP_002545543.1| peptide chain release factor 1, mitochondrial precursor [Candida tropicalis MYA-3404] gi|240136032|gb|EER35585.1| peptide chain release factor 1, mitochondrial precursor [Candida tropicalis MYA-3404] Length = 390 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 87/344 (25%), Positives = 149/344 (43%), Gaps = 18/344 (5%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 ++ + L+ K + + L + + N + ++ + L+ + Sbjct: 52 ESIRKEHKELSEKLSN-DYIPD------LQVKYDNYTNILGLYDKLNTYRSEYQELVNIT 104 Query: 77 LEED-DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 + D +E ++ V + + +E+ G GG E+ + Sbjct: 105 DDPDLRKEAQEELETIAPEVEKLVSQLSVKLRPPVKYAEKGCMIELRPGVGGNEASLFTG 164 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 LL MY +A + +K++ + + A L I +Y ++ E GVHR+ RI Sbjct: 165 DLLNMYMGFASEMNWKSKIISEGRNASGFLNEAILCIDTLGSYDIMRHESGVHRVQRIPE 224 Query: 196 YDSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 ++ R HTS +++ V P + + E + + RIDT RASG GGQHVNTTDS Sbjct: 225 TETKGRVHTSTAAVVVLPKLSEGNESSLKEDERVFAPGEVRIDTMRASGKGGQHVNTTDS 284 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIG 307 AVR+ HIPTG++V Q ERSQ NKA+A+ +LR++L + E ++ + + Sbjct: 285 AVRLVHIPTGMIVYQQDERSQPMNKAKAFAVLRSRLAQKEQEEEMIRQKNLRLDQVSSTD 344 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKAT 350 +I++Y + V D R N VL G L + Sbjct: 345 RSDKIKTYNFK-ENRVTDHRVNYSMHDLQGVLSGRKLGQLIDVY 387 >gi|119195451|ref|XP_001248329.1| peptide chain release factor 1, mitochondrial precursor (MRF-1) [Coccidioides immitis RS] Length = 438 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 92/340 (27%), Positives = 151/340 (44%), Gaps = 30/340 (8%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI-----KL 97 K + L + +KE L L + L+E + + + Sbjct: 68 KETAKRVGELTATVQALKEWDKAHESIAELNHLLDDPSSDPELRELASDDLQTTVSSLFA 127 Query: 98 EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157 + + +E+ GAGG E+ +A+ LLRMY + + +T L+ Sbjct: 128 LSGKLKESLIPRHPFAELPCLVEIRPGAGGDEAGLFASELLRMYLAFCSRHGLRTAILKK 187 Query: 158 HDGEEAG-------IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 + AG + A + I+ P +Y L+ E GVHR+ RI ++ R HTS S+ Sbjct: 188 DVEDGAGGSGSEDRLSEAVMEIEAPGSYNILRTEAGVHRVQRIPATEAKGRVHTSAVSVM 247 Query: 211 VYP-----------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 + P D + + I+ D + + RASGAGGQHVN T+SA+R+TH+PT Sbjct: 248 ILPSFSEQNDSALNFDDPNSDYYINPQDVQSEKMRASGAGGQHVNKTESAIRLTHVPTST 307 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRSY 315 VV Q RSQH+N+ +AW +LR+K+ ++ + RE+ +G G ++R+Y Sbjct: 308 VVAVQDSRSQHENRRKAWRLLRSKIAQMRREAREQELVELRRGIMGGVARMGRGDKVRTY 367 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353 D R+ + + VLDG LD+ M++ Sbjct: 368 NFG-QNRCTDHRSGVTIHNLGSVLDGGEGLDNIMESVSNW 406 >gi|213026460|ref|ZP_03340907.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 201 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 84/202 (41%), Positives = 124/202 (61%), Gaps = 6/202 (2%) Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E R+++ E + + +GE G K I G YG LK E G HR+ R+ +S R HTS Sbjct: 1 EARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTS 60 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 ++ V P + ++ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ Sbjct: 61 ACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQD 120 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQM 322 ERSQHKNKA+A ++L A+++ E KR++ + + +G G + R+Y P Sbjct: 121 ERSQHKNKAKALSVLGARIHAAETAKRQQ--AEASTRRNLLGSGDRSDRNRTYNF-PQGR 177 Query: 323 VKDLRTNIEKTSPSDVLDGDLD 344 V D R N+ + ++G LD Sbjct: 178 VTDHRINLTLYRLDETMEGKLD 199 >gi|149192359|ref|ZP_01870562.1| peptide chain release factor 1 [Vibrio shilonii AK1] gi|148833798|gb|EDL50832.1| peptide chain release factor 1 [Vibrio shilonii AK1] Length = 229 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 89/221 (40%), Positives = 135/221 (61%), Gaps = 6/221 (2%) Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 RMY+++AEK+ ++ E + ++ E+ G K + G AYG LK E G HR+ R+ + Sbjct: 1 FRMYSKYAEKKGWRIEVMSSNESEQGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATE 60 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 S R HTS ++ V + ++ EI +D +IDT+RASGAGGQHVNTTDSA+RITH+PT Sbjct: 61 SQGRVHTSACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPT 120 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314 G VV+CQ ERSQHKNKA+A ++L A+ + ++ + A + ++ + +G G +IR+ Sbjct: 121 GTVVECQDERSQHKNKAKAMSVLAAR--IIAAEEAKRAAEVSDTRRNLLGSGDRSDRIRT 178 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 Y P V D R N+ S+V++GDL + L + Sbjct: 179 YNY-PQGRVSDHRINLTLYRLSEVMEGDLQSLVDPVLQEHQ 218 >gi|170070084|ref|XP_001869460.1| peptide chain release factor 1 [Culex quinquefasciatus] gi|167866004|gb|EDS29387.1| peptide chain release factor 1 [Culex quinquefasciatus] Length = 425 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 105/352 (29%), Positives = 170/352 (48%), Gaps = 27/352 (7%) Query: 16 WDNAVQRLSFLN--TKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 +N L + + + L + + ++ + + + L Sbjct: 74 LENIRLEYYSLKVLEQMNKQDI-----------KRMALLSHVVEMYEQRRIIVDNLSSLA 122 Query: 74 ELA-LEEDDCSILQETSDNLQRIKLEVEYKQFES---LLSGEADSNDAYLEVHAGAGGTE 129 E+ +++D L + L + + E D + LEV AG GG E Sbjct: 123 EMGAEKDEDMLQLMKEEKEAYTNILRKLDGEIMDGILSMDEEEDYSSLILEVAAGVGGQE 182 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189 + +A + MY + E + ++ E L+ D E GI+ A+++I G +AY +LK E GVHR Sbjct: 183 AMLFAREVFDMYCGFVEFKGWEIEMLQTEDTELGGIRHASMVINGRDAYRFLKFEAGVHR 242 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + RI + ++R HTS +++ V P D+ +IE+ + D +I+T RASGAGGQHVNTTDSA Sbjct: 243 VQRIPSTEKSARIHTSTATVSVLPRPDEF-QIELKDKDLKIETKRASGAGGQHVNTTDSA 301 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 VRI H+PTG+ V+CQ ERSQ KNK A L AKL + EL+ + + K+++G Sbjct: 302 VRIVHLPTGMAVECQTERSQGKNKEIAKQKLLAKLTQQELESKFNAKQSLK--KSQVGSS 359 Query: 310 ---RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGD--LDDFMKATLAIKK 355 +IR+Y P + D R + ++G L D ++ + Sbjct: 360 TRNEKIRTYNY-PQDRITDHRLEGGTTHNLKVFMEGGPPLGDMVEKLRKDHR 410 >gi|194377328|dbj|BAG57612.1| unnamed protein product [Homo sapiens] Length = 468 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 97/335 (28%), Positives = 148/335 (44%), Gaps = 19/335 (5%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 +N + L + + N + L R L + +EIQ+ L + Sbjct: 93 ENLSKEYQTLEQCLQHIPV--NEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMC 150 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFES-------LLSGEADSNDAYLEVHAG--AGG 127 + Q L+ + + + + D ND LEV AG GG Sbjct: 151 KSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 210 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 Q + + MY ++ + ++ E L + G+ A I G Y LK E G+ Sbjct: 211 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGI 270 Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 HR+ RI +SR + + + D +++++ D RIDT+RA GAGGQHVN Sbjct: 271 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHVNK 330 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVR+ HIPTG+VV+CQQERSQ KNK A+ +LRA+LY+ ++K + + K + Sbjct: 331 TDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEK--DKRQQQSARKLQ 388 Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 +G +IR+Y V D R E Sbjct: 389 VGTRAQSERIRTYNF-TQDRVSDHRIAYEVRDIKA 422 >gi|26346685|dbj|BAC36991.1| unnamed protein product [Mus musculus] Length = 446 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 100/351 (28%), Positives = 159/351 (45%), Gaps = 21/351 (5%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 ++ + L+ + + +N + + L R L + +EIQ+ L L Sbjct: 81 EDLNKEYQTLDQCLQ--GISENEGDRRALHRRHAQLAPLAAVYQEIQEAEQAIEELESLC 138 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFES-------LLSGEADSNDAYLEVHAG--AGG 127 + Q + ++ + + + D +D LEV +G GG Sbjct: 139 KSLNKQDEKQLQELVSEERQIIDQKIHRLYSELLERLVPKEKYDWSDVILEVTSGRTTGG 198 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 Q + + MY ++ + +K E L + G+ A I G + Y LK E G+ Sbjct: 199 DICQQFTREIFDMYQNYSYYKHWKFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 258 Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 HR+ RI +SR + + + D +++++ D R+DT+RA GAGGQHVNT Sbjct: 259 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKVDPKDLRVDTFRARGAGGQHVNT 318 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVR+ HIPTG+VV+CQQERSQ KNK A +LRA+LY+ ++K K + Sbjct: 319 TDSAVRLVHIPTGLVVECQQERSQLKNKEIALRVLRARLYQQIIEKDRCQQQNA--RKLQ 376 Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351 +G +IR+Y V D R E + L G+ LD ++ L Sbjct: 377 VGTRAQSERIRTYNF-TQDRVTDPRIAYEVRDIKEFLRGEKCLDQLIERLL 426 >gi|321264047|ref|XP_003196741.1| peptide chain release factor 1, mitochondrial precursor [Cryptococcus gattii WM276] gi|317463218|gb|ADV24954.1| Peptide chain release factor 1, mitochondrial precursor, putative [Cryptococcus gattii WM276] Length = 476 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 102/347 (29%), Positives = 158/347 (45%), Gaps = 21/347 (6%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 N +++ K D + + A+ + +E L + E++ + D LE + Sbjct: 110 NVYKKVMENEAKATDIDVKGQIERAR-VQKELAPLLEVWNRYLELKQSIIDMKPFLEDSD 168 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN-DAYLEVHAGAGGTESQDWANM 136 E + + + LL + ++ A + ++AG GG ES Sbjct: 169 PTLREMFETEHASLCTELDTLIISTFPTVLLPPSSTASLPAVMSLNAGVGGLESALCTED 228 Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-----------AYGWLKGEQ 185 L RMY R+A R +K E + +G + YG L+ E+ Sbjct: 229 LARMYLRFATNRGWKVEEISRVEGTGGKGGGGIRELTVKFEPPQYAEEGTEVYGALQWEK 288 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQHVN 244 GVHR+ R+ ++ R HTS ++ V P+ D+ + D RID RA GAGGQHVN Sbjct: 289 GVHRIQRVPANETQGRIHTSTVAVIVLPMYPDTAEAPLVDPKDVRIDVMRARGAGGQHVN 348 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 T+SAVR+THIPTG+ V Q RSQH+N+A AW +LRA+L E + EE+ S + Sbjct: 349 RTESAVRLTHIPTGITVSMQDSRSQHQNRAWAWEILRARLS--EKKHNEEVEARRASRRD 406 Query: 305 EI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFM 347 ++ +IR+Y + D R I T VLDG+ L+D + Sbjct: 407 QVKGADRSDKIRTYNFN-QDRLTDHRFGITVTGLQRVLDGEGLEDVI 452 >gi|300176358|emb|CBK23669.2| unnamed protein product [Blastocystis hominis] Length = 244 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 97/220 (44%), Positives = 141/220 (64%), Gaps = 2/220 (0%) Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 MLL MYT +A+K +K + + D ++ S+ L ++G + +L E GVHRLVRISP Sbjct: 1 MLLAMYTSFAQKMNWKCKLISKLDDGDS-CHSSILKLEGDDLASYLSLESGVHRLVRISP 59 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +D N RRHTSF+S+ V PV + + + I ++ +ID +R+SG GGQHVN T+SAVR+TH+ Sbjct: 60 FDKNQRRHTSFASVSVSPVPEAASSLRILPTELQIDRFRSSGPGGQHVNKTESAVRVTHL 119 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315 P+G+V +CQ ER+QH+N A M+++KL E +K E + K W QIRSY Sbjct: 120 PSGIVAECQAERNQHQNLEIAMEMVKSKLLLREAEKEAEKKQEDHARKDVNAWSSQIRSY 179 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 VL PY+MVKD R +E+ +L GDL F++ +A +K Sbjct: 180 VLHPYKMVKDHRFGVEEGDVEKILGGDLKGFVEE-IARRK 218 >gi|331657262|ref|ZP_08358224.1| peptide chain release factor 1 [Escherichia coli TA206] gi|331055510|gb|EGI27519.1| peptide chain release factor 1 [Escherichia coli TA206] Length = 323 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 86/271 (31%), Positives = 132/271 (48%), Gaps = 7/271 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ ++ + + Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +S R HTS ++ V P + D+ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +PTG+++ + N L+ LY Sbjct: 249 LPTGLLLNVRT------NVHNIKTKLKHFLY 273 >gi|302496498|ref|XP_003010250.1| hypothetical protein ARB_03505 [Arthroderma benhamiae CBS 112371] gi|291173792|gb|EFE29610.1| hypothetical protein ARB_03505 [Arthroderma benhamiae CBS 112371] Length = 438 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 87/341 (25%), Positives = 153/341 (44%), Gaps = 31/341 (9%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 + + + + +K+ L L E + L+ +++ + Sbjct: 71 RAAAKRIGEIAPVANALKDWDTAHESITELQGLIDEPSTDTELKSLAEDDITTTIGTLSS 130 Query: 103 -----QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157 + + +E+ GAGG E+ +A +LRMYT + R +T +++ Sbjct: 131 LSATLKRALIPRHPFADMPCLIEIRPGAGGDEAGLFAAEMLRMYTSFCSSRGLRTTIIKM 190 Query: 158 HDGEEAG------IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 + G + + ++ P +Y L+ E GVHR+ R+ ++ R HTS S+ + Sbjct: 191 EAEDGVGAGAEERLSEVVMEVETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMI 250 Query: 212 YP-------------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 P D + + ++ D + + +RASGAGGQHVN T+SAVR+THIPTG Sbjct: 251 LPSFPESNQEDSPLNFDDPNSDYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHIPTG 310 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRS 314 V+ Q RSQH+N+ +AW +LRAKL + + RE+ + G G +IR+ Sbjct: 311 TVISMQDSRSQHENRRKAWLLLRAKLAQARREAREQEMMELRRGAMGGVNKTGRGDKIRT 370 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353 Y D R+ + + V+DG +L+ M++ + Sbjct: 371 YNF-TQSRCTDHRSGMTVHNIGKVMDGGENLEKIMESVQSW 410 >gi|195031191|ref|XP_001988305.1| GH11092 [Drosophila grimshawi] gi|193904305|gb|EDW03172.1| GH11092 [Drosophila grimshawi] Length = 395 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 107/320 (33%), Positives = 159/320 (49%), Gaps = 16/320 (5%) Query: 48 ERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR----IKLEVEYKQ 103 LD ++ +++ + + ELA E+D+ +N K E + Q Sbjct: 58 RLSRLDPVVNSLEKHRALQRNITPKQELAAEKDEDMRALMQEENNVYADLLRKQEEDMLQ 117 Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163 L+ D EV AGAGG E+ +A L MYT + E ++ E + Sbjct: 118 ELLTLADNVDYPALIFEVKAGAGGQEAMLFAQELYDMYTSYFEHMGWEYEEFAYETTDIG 177 Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 G++ A LL+ P AY WL+ E GVHR+ R+ + + R HTS +SI V P + + + Sbjct: 178 GLRHANLLVSDPEAYNWLRYEAGVHRVQRVPTTEKSGRMHTSTASITVIP-RPADVHVHL 236 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 ++ D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+CQ ERSQ KN+ A L+AK Sbjct: 237 TDRDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVECQSERSQLKNRELALKRLQAK 296 Query: 284 LYELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRT--NIEKTSPSDV 338 L + +L+ A+ + K++ G +IR+Y V D R + S Sbjct: 297 LMQQQLE--SAEASKQATRKSQQGNLNRNEKIRTYNFM-QDRVTDHRVQQGGTLHNLSGF 353 Query: 339 LDG--DLDDFMKAT-LAIKK 355 L G L ++ L +K Sbjct: 354 LAGGQQLSVLIERLQLEQRK 373 >gi|327306561|ref|XP_003237972.1| peptide chain release factor 1 [Trichophyton rubrum CBS 118892] gi|326460970|gb|EGD86423.1| peptide chain release factor 1 [Trichophyton rubrum CBS 118892] Length = 438 Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats. Identities = 87/341 (25%), Positives = 153/341 (44%), Gaps = 31/341 (9%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 + + + + +K+ L L E + L+ +++ + Sbjct: 71 RAAAKRIGEIAPVANALKDWDTAHESITELQGLIDEPSTDTELKSLAEDDITTTIGTLSS 130 Query: 103 -----QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157 + + +E+ GAGG E+ +A +LRMYT + R +T +++ Sbjct: 131 LSATLKRALIPRHPFADMPCLIEIRPGAGGDEAGLFAAEMLRMYTSFCSSRGLRTTIIKM 190 Query: 158 HDGEEAG------IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 + G + + ++ P +Y L+ E GVHR+ R+ ++ R HTS S+ + Sbjct: 191 EAEDGVGAGAEERLSEVVMEVETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMI 250 Query: 212 YP-------------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 P D + + ++ D + + +RASGAGGQHVN T+SAVR+THIPTG Sbjct: 251 LPSFPENNQEDSPLNFDDPNSDYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHIPTG 310 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRS 314 V+ Q RSQH+N+ +AW +LRAKL + + RE+ + G G +IR+ Sbjct: 311 TVISMQDSRSQHENRRKAWLLLRAKLAQARREAREQEMMELRRGAMGGVNKTGRGDKIRT 370 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353 Y D R+ + + V+DG +L+ M++ + Sbjct: 371 YNF-TQSRCTDHRSGMTVHNIGKVMDGGENLEKIMESVQSW 410 >gi|261188569|ref|XP_002620699.1| peptide chain release factor 1 [Ajellomyces dermatitidis SLH14081] gi|239593183|gb|EEQ75764.1| peptide chain release factor 1 [Ajellomyces dermatitidis SLH14081] gi|239613247|gb|EEQ90234.1| peptide chain release factor 1 [Ajellomyces dermatitidis ER-3] Length = 438 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 94/365 (25%), Positives = 155/365 (42%), Gaps = 34/365 (9%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 + + L +K + + AK E A+ ++ + + + LL+ Sbjct: 51 SIANEHATLTSKLAE-TF--DPKTAKRAG-ELATTARALKKWEDANETIAELNNLLKDPS 106 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN--DAYLEVHAGAGGTESQDWAN 135 + + L L + + L LE+ GAGG E+ +AN Sbjct: 107 TDSELHSLALEDLQSTTTSLAILSTNLKQALIPRHPFADLPCLLELRPGAGGEEAGIFAN 166 Query: 136 MLLRMYTRWAEKRKFKT---EALEIHDGEEAGIKSA----TLLIKGPNAYGWLKGEQGVH 188 LLRMYT + R + + G G + + I+ P +Y L+ E GVH Sbjct: 167 ELLRMYTMFCSNRGLHVTLLKKESENAGASGGSEDRLVEAVMEIETPGSYETLRTEAGVH 226 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYP--------------VVDDSIEIEISESDCRIDTYR 234 R+ R+ +S R HTS S+ + P D + + I + ++ R Sbjct: 227 RVQRVPATESKGRTHTSAVSVVILPSFPNNGEEGDSEMNFDDPNSDYYIDPQEVNVEKMR 286 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 A GAGGQHVN T+SA+R+THIPTG+VV Q RSQH+N+ +AW++LRA++ + + REE Sbjct: 287 AGGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWHLLRARIAQQRREAREE 346 Query: 295 IANIGE----SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMK 348 ++G G +IR+Y D R+ + +++G L+ M Sbjct: 347 EMVKLRRGAMGGVGKMGRGDKIRTYNFG-QNRCTDHRSGFTVHNLGSIMEGGDGLEKIMD 405 Query: 349 ATLAI 353 + Sbjct: 406 SVRGW 410 >gi|325190234|emb|CCA24711.1| peptide chain release factor putative [Albugo laibachii Nc14] Length = 372 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 119/314 (37%), Positives = 184/314 (58%), Gaps = 2/314 (0%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ +L + + + + + L ++ W N A + + +++ + + Sbjct: 55 QVKDKLAVIQNILETEKTTENTQRLREESSTLGFWGNAANAIAISQRLSAMESQLQRVSA 114 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + + + L L+ E D +++E + ++ I+ V+ E +LSG+ D +LE+ Sbjct: 115 YRAQFLETKELYLLSEAEKDQEMMEECFETMESIRKAVQTLSMELMLSGKDDRLPCFLEI 174 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGGT+SQDW ML +MY RWA+ +K+K + ++ E G +S L I G AYGW+ Sbjct: 175 QAGAGGTDSQDWVAMLSKMYERWAQHKKYKVQYVDGLRTELGGFRSVCLRIDGDLAYGWI 234 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV--DDSIEIEISESDCRIDTYRASGAG 239 K E GVHRL+R+SPYD RRHTSF+ + VYP+ + + +S D RIDT+RA+G G Sbjct: 235 KLEAGVHRLIRLSPYDQQKRRHTSFAQVRVYPIEAAEATTRTAVSGKDLRIDTFRATGPG 294 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQHVN+TDSAVRITH+P+G+VVQCQ ERSQH+NKAQA +L AKL E+ +++ Sbjct: 295 GQHVNSTDSAVRITHLPSGIVVQCQSERSQHRNKAQAMEVLLAKLNNQEIAEQQSAKRQY 354 Query: 300 ESSKTEIGWGRQIR 313 + WG Q+R Sbjct: 355 AKGLGDNAWGNQVR 368 >gi|114651379|ref|XP_001150035.1| PREDICTED: mitochondrial translational release factor 1 isoform 1 [Pan troglodytes] Length = 455 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 97/335 (28%), Positives = 148/335 (44%), Gaps = 19/335 (5%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 +N + L + + N + L R L + +EIQ+ L + Sbjct: 80 ENLSKEYQTLEQCLQHIPV--NEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMC 137 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFES-------LLSGEADSNDAYLEVHAG--AGG 127 + Q L+ + + + + D ND LEV AG GG Sbjct: 138 KSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 197 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 Q + + MY ++ + ++ E L + G+ A I G Y LK E G+ Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGI 257 Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 HR+ RI +SR + + + D +++++ D RIDT+RA GAGGQHVN Sbjct: 258 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHVNK 317 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVR+ HIPTG+VV+CQQERSQ KNK A+ +LRA+LY+ ++K + + K + Sbjct: 318 TDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEK--DKRQQQSARKLQ 375 Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337 +G +IR+Y V D R E Sbjct: 376 VGTRAQSERIRTYNF-TQDRVSDHRIAYEVRDIKA 409 >gi|327357433|gb|EGE86290.1| peptide chain release factor 1 [Ajellomyces dermatitidis ATCC 18188] Length = 438 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 94/365 (25%), Positives = 155/365 (42%), Gaps = 34/365 (9%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 + + L +K + + AK E A+ ++ + + + LL+ Sbjct: 51 SIANEHATLTSKLAE-TF--DPKTAKRAG-ELATTARALKKWEDANETIAELNNLLKDPS 106 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN--DAYLEVHAGAGGTESQDWAN 135 + + L L + + L LE+ GAGG E+ +AN Sbjct: 107 TDSELHSLALEDLQSTTTSLAILSTNLKQALIPRHPFADLPCLLELRPGAGGEEAGIFAN 166 Query: 136 MLLRMYTRWAEKRKFKT---EALEIHDGEEAGIKSA----TLLIKGPNAYGWLKGEQGVH 188 LLRMYT + R + + G G + + I+ P +Y L+ E GVH Sbjct: 167 ELLRMYTMFCSNRGLHVTLLKKESENAGASGGSEDRLVEAVMEIETPGSYETLRTEAGVH 226 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYP--------------VVDDSIEIEISESDCRIDTYR 234 R+ R+ +S R HTS S+ + P D + + I + ++ R Sbjct: 227 RVQRVPATESKGRTHTSAVSVVILPSFPNNGEEGDSEMNFDDPNSDYYIDPQEVNVEKMR 286 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 A GAGGQHVN T+SA+R+THIPTG+VV Q RSQH+N+ +AW++LRA++ + + REE Sbjct: 287 AGGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWHLLRARIAQQRREAREE 346 Query: 295 IANIGE----SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMK 348 ++G G +IR+Y D R+ + +++G L+ M Sbjct: 347 EMVKLRRGAMGGVGKMGRGDKIRTYNFG-QNRCTDHRSGFTVHNLGSIMEGGDGLEKIMD 405 Query: 349 ATLAI 353 + Sbjct: 406 SVRGW 410 >gi|321479100|gb|EFX90056.1| hypothetical protein DAPPUDRAFT_299896 [Daphnia pulex] Length = 417 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 90/301 (29%), Positives = 150/301 (49%), Gaps = 12/301 (3%) Query: 49 RQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL 108 +QH+ + ++ D L L+ ++D L + ++ + +L Sbjct: 92 KQHIQSLAGLGGKLLQTENDLQELKALSADDDKNGDLAKMVSEEFSQLKQILVQIQNEVL 151 Query: 109 S-----GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163 + +E AG GG ES + N +L+MY + E + E +I + Sbjct: 152 ELILQEDNHQTEGIIMEFSAGVGGQESMLFCNEILQMYITYCESEGWDYELTDIEKSDLE 211 Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 GI+ A + I +AY L+ E GVHR+ R+ + R HTS ++ + P + + I Sbjct: 212 GIRHAAICINNSDAYDRLQFESGVHRVQRVPKTEKAGRVHTSTVAVAILP-RPSEVTVNI 270 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 + D +I+T RASGAGGQHVNTT+SAVRI HIP+GVV +CQ +RSQ +N+ A + +RA+ Sbjct: 271 EQKDLKIETKRASGAGGQHVNTTESAVRIVHIPSGVVAECQTQRSQMQNRKVAIDKIRAR 330 Query: 284 LYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 L+++++ ++ S K ++ G +IR+Y P + D R N + + L Sbjct: 331 LFQMKIDQQLAT--TRSSRKLQVGSSGRSEKIRTYNF-PQDRITDHRINFTSHNLGEFLR 387 Query: 341 G 341 G Sbjct: 388 G 388 >gi|326470521|gb|EGD94530.1| peptide chain release factor 1 [Trichophyton tonsurans CBS 112818] Length = 438 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 86/341 (25%), Positives = 152/341 (44%), Gaps = 31/341 (9%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 + + + + +K+ L L E + L+ +++ + Sbjct: 71 RAAAKRIGEIAPVANALKDWDTAHESITELQGLIDEPSTDTELKSLAEDDITTTIGTLSS 130 Query: 103 -----QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157 + + +E+ GAGG E+ +A +LRMYT + R +T +++ Sbjct: 131 LSDTLKRALIPRHPFADMPCLIEIRPGAGGDEAGLFAAEMLRMYTSFCSSRGLRTTIIKM 190 Query: 158 HDGEEAG------IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 + G + + ++ P +Y L+ E GVHR+ R+ ++ R HTS S+ + Sbjct: 191 EAEDGVGAGAEERLSEVVMEVETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMI 250 Query: 212 YP-------------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 P D + + ++ D + + +RASGAGGQHVN T+SAVR+THIPTG Sbjct: 251 LPSFPENNQEDSPLNFDDPNSDYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHIPTG 310 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRS 314 V+ Q RSQH+N+ +AW +LRAKL + + RE+ + G G +IR+ Sbjct: 311 TVISMQDSRSQHENRRKAWLLLRAKLAQARREAREQEMMELRRGAMGGVNKTGRGDKIRT 370 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353 Y D R+ + + V+DG +L+ +++ Sbjct: 371 YNF-TQSRCTDHRSGMTVHNIGKVMDGGENLEKIIESVQNW 410 >gi|119625009|gb|EAX04604.1| hCG2025689 [Homo sapiens] Length = 238 Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats. Identities = 90/225 (40%), Positives = 124/225 (55%), Gaps = 9/225 (4%) Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 + + + MY ++A +++ E LE E G++ A+ I G AY +K E GVHR+ Sbjct: 1 MLFTSEIFDMYQQYAAFKRWHFETLEYFPSEVGGLRHASASIGGSEAYRHMKFEGGVHRV 60 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250 R+ + HTS ++ + P I + I+ D RIDT RASGAG QHVNTTDSAV Sbjct: 61 QRVPKTEKQGCVHTSTMTVAILPQ-PTEINLVINPKDLRIDTKRASGAGEQHVNTTDSAV 119 Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307 RI H+PTGVV +CQQERSQ KNK A LRAKLY + ++ EEI + K +I G Sbjct: 120 RIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHVE--EEINKRQNARKIQIGSKG 177 Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKAT 350 +IR+Y P V D R N + GD LD+ +++ Sbjct: 178 RSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLLDELVQSL 221 >gi|193613150|ref|XP_001944471.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like [Acyrthosiphon pisum] Length = 400 Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats. Identities = 88/300 (29%), Positives = 151/300 (50%), Gaps = 11/300 (3%) Query: 55 AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES--LLSGEA 112 +S I+ ++ L ++++ + +L + + + + + Sbjct: 82 LVSAIRSLKVDLQSLDEFEIEKEKDEEFGEQLQKEKKSHEEQLTLLELELLNSLVPNENF 141 Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 D D LE+ AG GG E+ + L MY +A + +K+E + E GI+ A L++ Sbjct: 142 DCEDVMLEITAGVGGQEAMIFTQELFEMYNSFAHYKGWKSEVADYCHTEMGGIRHACLML 201 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G + Y L+ E GVHR+ R+ + + R HTS ++ + P + + I++ D I+T Sbjct: 202 SGTDCYSLLQHEGGVHRVQRVPKTEKSGRIHTSTVTVAILPQPTELDVV-INDRDLVIET 260 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASGAGGQHVN TDSA+R+ H PTGV+V+CQ +RSQ KN+ A LRA +Y+ +L+++ Sbjct: 261 KRASGAGGQHVNKTDSAIRMHHKPTGVIVECQTDRSQIKNRKIALQKLRAIIYKKQLEQQ 320 Query: 293 EEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFM 347 + + + K ++G +IR+Y + D R + L+G LD + Sbjct: 321 QSL--TRSARKQQVGSSARSEKIRTYNFN-QDRITDHRLTKSFHNLVGFLEGREYLDKVV 377 >gi|213421201|ref|ZP_03354267.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 148 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 89/147 (60%), Positives = 110/147 (74%), Gaps = 1/147 (0%) Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 SS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SAVRITHIPTG+V QCQ + Sbjct: 1 SSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQND 60 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG QIRSYVL +KDL Sbjct: 61 RSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWGSQIRSYVLDD-SRIKDL 119 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAI 353 RT +E + VLDG LD F++A+L Sbjct: 120 RTGVETRNTQAVLDGSLDQFIEASLKA 146 >gi|72024372|ref|XP_797931.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115937037|ref|XP_001184225.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 422 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 102/318 (32%), Positives = 159/318 (50%), Gaps = 17/318 (5%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF------ 104 L + +E+ + L L E D S +E + K +++ Sbjct: 89 ELGAVLDKWEELTSAEEEITELQRLIEEPSDTSQDKEMQELAAAEKDDLDAMIADISEEL 148 Query: 105 --ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 L S E D ND +E AG GG E+ +A + MY R+A R + LE + Sbjct: 149 VDLLLPSEETDDNDVIMEFTAGVGGQEAMLFAADMFEMYQRYAAYRGWTFSVLEYFTTDM 208 Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 G++ A++ + G AY L+ E GVHR+ R+ +S R HTS +I V P I+++ Sbjct: 209 GGLRHASVSMSGDQAYLLLRQEAGVHRVQRVPRTESKGRIHTSTMAIAVLP-QPKEIDLK 267 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 + D R++T +ASGAGGQHVNTTDSAVRITH+PTG+ + QQERSQHKN++ A ML+ Sbjct: 268 LDPKDLRVETKKASGAGGQHVNTTDSAVRITHLPTGISAESQQERSQHKNRSIAMTMLQT 327 Query: 283 KLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 ++Y L ++ ++ +++G G +IR+Y Q + D R + L Sbjct: 328 RIYNRILA--DQTSSERSMRSSQVGTGGRSEKIRTYNYQ-QDRITDHRRGRTVHGVPEYL 384 Query: 340 DGD--LDDFMKATLAIKK 355 G LD+ + + + + Sbjct: 385 LGSELLDEMVTSCVEGDQ 402 >gi|153210408|ref|ZP_01947622.1| peptide chain release factor 1 [Coxiella burnetii 'MSU Goat Q177'] gi|120575132|gb|EAX31756.1| peptide chain release factor 1 [Coxiella burnetii 'MSU Goat Q177'] Length = 267 Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats. Identities = 83/259 (32%), Positives = 129/259 (49%), Gaps = 3/259 (1%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72 R S + D + + + L +E L+ + ++ Q + + Sbjct: 9 LKTLTYRYSEIGGLLSDSTVINDQDRYRELGKEYAQLEPIVKCFQQFQQNEKAIESAEEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + E +E + + + + + D + +LE+ AG GG E+ Sbjct: 69 QQEKDPELRKLAEEELEQLTLKKEELEDQLKLLLVPKDPNDERNVFLEIRAGTGGNEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY R+AE + ++ + H+GE G K + G Y LK E G HR+ R Sbjct: 129 FAGDLFRMYARYAETKGWRVNIVSAHEGEHGGFKEVIARVIGEGVYSQLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS ++ + P VD+ +I+I+ ++ RIDT+RASGAGGQHVN TDSA+RI Sbjct: 189 VPVTESQGRIHTSACTVAIMPEVDEIDQIKINPAELRIDTFRASGAGGQHVNRTDSAIRI 248 Query: 253 THIPTGVVVQCQQERSQHK 271 TH+PTGVVV+CQ ER K Sbjct: 249 THLPTGVVVECQDERRNTK 267 >gi|296804966|ref|XP_002843310.1| peptide chain release factor 1 [Arthroderma otae CBS 113480] gi|238845912|gb|EEQ35574.1| peptide chain release factor 1 [Arthroderma otae CBS 113480] Length = 438 Score = 148 bits (374), Expect = 9e-34, Method: Composition-based stats. Identities = 90/341 (26%), Positives = 150/341 (43%), Gaps = 31/341 (9%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 + R L + +K+ L L E + L+ + + + Sbjct: 71 RAAARRLGELAPVANALKDWDRANESITELQGLINEPSTDAELKSLAQDDITSTIATLSS 130 Query: 103 -----QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157 + + +E+ GAGG E+ +A +LRMY + R +T ++ Sbjct: 131 LSATLKRALIPRHPFADMPCLIEIRPGAGGDEAGLFAAEMLRMYMAFCSSRGLRTAIIKK 190 Query: 158 HDGEEAG------IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 + G + A + I+ P +Y L+ E GVHR+ R+ ++ R HTS S+ + Sbjct: 191 ETEDGVGAGAEERLSEAVMEIETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMI 250 Query: 212 YP-------------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 P D + + ++ D + + +RASGAGGQHVN T+SAVR+THIPTG Sbjct: 251 LPSFPDNNQGDSPLNFDDPNSDYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHIPTG 310 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRS 314 V+ Q RSQH+N+ +AW +LRAKL + + RE+ + G G +IR+ Sbjct: 311 TVISMQDSRSQHENRRKAWLLLRAKLAQARREAREQEMMELRRGAMGGVNKTGRGDKIRT 370 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353 Y D R+ + + V+DG +L+ M++ Sbjct: 371 YNF-TQSRCTDHRSGMTVHNIGKVMDGGENLEKIMESVQNW 410 >gi|83773134|dbj|BAE63261.1| unnamed protein product [Aspergillus oryzae] Length = 388 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 95/338 (28%), Positives = 153/338 (45%), Gaps = 29/338 (8%) Query: 44 MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ 103 + + L + + E L L + D L+ + Sbjct: 29 RIAKRVGELAPIANVLDEWDRANESISELNALLFDPDTDLELKSLAIEDLETVKAALPTI 88 Query: 104 FES-----LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 E+ + + LE+ GAGG E+ +A LLRMYT + +R F++ +++ Sbjct: 89 SENLKKALVPRHPFAALPCLLEIRPGAGGDEAGLFAFELLRMYTAFCSRRGFRSNVIKLE 148 Query: 159 DGE---EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-- 213 G+ E + A + ++ AY L+ E GVHR+ R+ ++ R HTS S+ V P Sbjct: 149 VGDGPAEDRLNEAVMEVEADGAYEILRTESGVHRVQRVPATETKGRTHTSAVSVMVLPSF 208 Query: 214 ------------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 D + + + + R + RA GAGGQHVN T+SA+R+TH+PTG+VV Sbjct: 209 PETGGAMDNALNFDDPNSDYYVDPQEVRSEKMRAGGAGGQHVNKTESAIRLTHMPTGIVV 268 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRSYVL 317 Q RSQH N+ +AW +LRA+L E + RE+ +G G +IR+Y Sbjct: 269 SMQDSRSQHANRKKAWQILRARLAEARQEAREQKFVELRRGVLGGVARMGRGDKIRTYNY 328 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353 D R++I + +DVLDG L+ M++ + Sbjct: 329 G-QSRCTDHRSSITIHNLNDVLDGGEGLETVMESVRSW 365 >gi|126337707|ref|XP_001368579.1| PREDICTED: similar to Mitochondrial translational release factor 1 [Monodelphis domestica] Length = 447 Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats. Identities = 98/351 (27%), Positives = 156/351 (44%), Gaps = 21/351 (5%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 ++ L+ + + + + R L + KEIQ+ L + Sbjct: 79 EDLTGEYQRLDRLLHHVSV-SDGDR-RTMSRRHAELAQFTAIYKEIQESEKAIEDLESMC 136 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESL-------LSGEADSNDAYLEVHAG--AGG 127 ++ Q + ++ + + D +D LEV +G GG Sbjct: 137 KSLNEQDEKQLLELAFEEREVIDQKINRLCQELFQSLVPKEKDDKSDVILEVTSGRTTGG 196 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 Q + + MY ++ + + E L + G+ A I G + Y ++K E G+ Sbjct: 197 DICQQFTKEIFEMYQSYSCYKGWNFEILNYTTADYGGLHHAAARISGDSVYEYMKYEGGI 256 Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 HR+ RI +SR + + + D ++I + D RIDT+RA GAGGQHVNT Sbjct: 257 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDIRVEPKDLRIDTFRAKGAGGQHVNT 316 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRI HIPTG+VV+CQQ+RSQ +NK A+ +LRAKLY+ ++K + K + Sbjct: 317 TDSAVRIVHIPTGLVVECQQQRSQIQNKDTAFRLLRAKLYQQTIEKEQSKKQSV--RKLQ 374 Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351 +G +IR+Y V D R + E + L G LD ++ L Sbjct: 375 VGTRAQSERIRTYNF-TQDRVTDHRISYEARDIKEFLCGGRPLDTLIQRLL 424 >gi|317151025|ref|XP_001824394.2| peptide chain release factor 1 [Aspergillus oryzae RIB40] Length = 427 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 95/338 (28%), Positives = 153/338 (45%), Gaps = 29/338 (8%) Query: 44 MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ 103 + + L + + E L L + D L+ + Sbjct: 68 RIAKRVGELAPIANVLDEWDRANESISELNALLFDPDTDLELKSLAIEDLETVKAALPTI 127 Query: 104 FES-----LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 E+ + + LE+ GAGG E+ +A LLRMYT + +R F++ +++ Sbjct: 128 SENLKKALVPRHPFAALPCLLEIRPGAGGDEAGLFAFELLRMYTAFCSRRGFRSNVIKLE 187 Query: 159 DGE---EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-- 213 G+ E + A + ++ AY L+ E GVHR+ R+ ++ R HTS S+ V P Sbjct: 188 VGDGPAEDRLNEAVMEVEADGAYEILRTESGVHRVQRVPATETKGRTHTSAVSVMVLPSF 247 Query: 214 ------------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 D + + + + R + RA GAGGQHVN T+SA+R+TH+PTG+VV Sbjct: 248 PETGGAMDNALNFDDPNSDYYVDPQEVRSEKMRAGGAGGQHVNKTESAIRLTHMPTGIVV 307 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRSYVL 317 Q RSQH N+ +AW +LRA+L E + RE+ +G G +IR+Y Sbjct: 308 SMQDSRSQHANRKKAWQILRARLAEARQEAREQKFVELRRGVLGGVARMGRGDKIRTYNY 367 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353 D R++I + +DVLDG L+ M++ + Sbjct: 368 G-QSRCTDHRSSITIHNLNDVLDGGEGLETVMESVRSW 404 >gi|153845428|ref|ZP_01993769.1| peptide chain release factor 2 [Vibrio parahaemolyticus AQ3810] gi|149745113|gb|EDM56364.1| peptide chain release factor 2 [Vibrio parahaemolyticus AQ3810] Length = 148 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 88/146 (60%), Positives = 109/146 (74%), Gaps = 1/146 (0%) Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 S +YP +D++I I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT VVQCQ + Sbjct: 1 MSALIYPEIDENIAIDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQND 60 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 RSQHKNK QA LRAKL+ELELQK+ E +K++IGWG QIRSYVL +KDL Sbjct: 61 RSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDL 119 Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLA 352 RT +E + VLDGDLD F++A+L Sbjct: 120 RTGVENRNTQAVLDGDLDKFIEASLK 145 >gi|297291498|ref|XP_001095577.2| PREDICTED: mitochondrial translational release factor 1-like isoform 2 [Macaca mulatta] Length = 326 Score = 148 bits (372), Expect = 2e-33, Method: Composition-based stats. Identities = 85/200 (42%), Positives = 113/200 (56%), Gaps = 9/200 (4%) Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E+ G G++ A+ I G AY +K E GVHR+ R+ + R HTS ++ + P Sbjct: 114 EVTAGVGGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILP-Q 172 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 I + I+ D RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+ Sbjct: 173 PTEINLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREL 232 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEK 332 A LRAKLY + L+K E + K +I G +IR+Y P V D R + Sbjct: 233 AMKKLRAKLYSMHLEK--EANKTQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRISKTL 289 Query: 333 TSPSDVLDGD--LDDFMKAT 350 + GD LD+ +++ Sbjct: 290 HDLETFMQGDYLLDELVQSL 309 >gi|195398186|ref|XP_002057705.1| GJ17953 [Drosophila virilis] gi|194141359|gb|EDW57778.1| GJ17953 [Drosophila virilis] Length = 393 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 104/318 (32%), Positives = 161/318 (50%), Gaps = 12/318 (3%) Query: 48 ERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107 LD ++ +++ + + +LA E+D+ +N +L + ++ Sbjct: 58 RLSRLDPVVNSLEKHRALQRNITPEQDLAAEKDEDMRALMLEENNVYAELLRKQEEAMLQ 117 Query: 108 ----LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163 L+ D EV+AGAGG E+ +A L MYT + E ++ E + Sbjct: 118 ELLALADHEDYPSLIFEVNAGAGGQEAMLFAQELYDMYTSYFEHMGWEYEQYAHETTDIG 177 Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 G++ A LL+ P AY WL+ E GVHR+ R+ + + R HTS +SI V P +++ I Sbjct: 178 GLRYANLLVNDPEAYNWLRYEAGVHRVQRVPATEKSGRMHTSTASITVIP-RPADVQVHI 236 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +E D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+ A L+AK Sbjct: 237 AERDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVESQSERSQLKNRELALKRLQAK 296 Query: 284 LYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPYQMVKDLRT--NIEKTSPSDVLD 340 L + +L+ E + + + +IR+Y V D R + + S L+ Sbjct: 297 LMQQQLESSEATKQATRKAQQGNLNRNEKIRTYNFV-QDRVTDHRVQQGGTQHNLSGFLE 355 Query: 341 GD--LDDFMKAT-LAIKK 355 G L D ++ L +K Sbjct: 356 GGQPLSDLIERLHLEQRK 373 >gi|317033212|ref|XP_001395081.2| peptide chain release factor 1 [Aspergillus niger CBS 513.88] Length = 429 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 92/338 (27%), Positives = 145/338 (42%), Gaps = 29/338 (8%) Query: 44 MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV---- 99 L + L S +KE + LL L + + + L+ + Sbjct: 68 KLAKRVGELAPIASTLKEWEHANSSISELLSLLDDPETDAELRSLAVEDLESSKIALPAI 127 Query: 100 -EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 + + + LE+ GAGG E+ +A +LRMY + +R F+ ++ Sbjct: 128 ADNLKKALIPRHPFADLPCLLEIRPGAGGDEAGLFAFEVLRMYIAFCSRRGFRYSIIKQD 187 Query: 159 DGE---EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-- 213 + + + A L + AY L+ E GVHR+ R+ ++ R HTS S+ + P Sbjct: 188 VADGPAQDRLSEAVLEVDADGAYDILRTESGVHRVQRVPATEAKGRTHTSAVSVMILPSF 247 Query: 214 ------------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 D + + + + R + RA GAGGQHVN T+SA+R+THIPTG VV Sbjct: 248 PDSGSGLDSSLNFEDPNSDYYVDPQEVRTEKMRAGGAGGQHVNKTESAIRLTHIPTGTVV 307 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEI----ANIGESSKTEIGWGRQIRSYVL 317 Q RSQH N+ +AW +LRA+L E + RE+ +G G +IR+Y Sbjct: 308 SMQDSRSQHANRKKAWQVLRARLAEARREAREQELVNLRRGAMGGVARMGRGDKIRTYNY 367 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353 D R+ + + VLDG L+ M + Sbjct: 368 G-QNRCTDHRSGLTIHNLDSVLDGGEGLETVMDSVRTW 404 >gi|134079787|emb|CAK40922.1| unnamed protein product [Aspergillus niger] Length = 462 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 92/338 (27%), Positives = 145/338 (42%), Gaps = 29/338 (8%) Query: 44 MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV---- 99 L + L S +KE + LL L + + + L+ + Sbjct: 101 KLAKRVGELAPIASTLKEWEHANSSISELLSLLDDPETDAELRSLAVEDLESSKIALPAI 160 Query: 100 -EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158 + + + LE+ GAGG E+ +A +LRMY + +R F+ ++ Sbjct: 161 ADNLKKALIPRHPFADLPCLLEIRPGAGGDEAGLFAFEVLRMYIAFCSRRGFRYSIIKQD 220 Query: 159 DGE---EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-- 213 + + + A L + AY L+ E GVHR+ R+ ++ R HTS S+ + P Sbjct: 221 VADGPAQDRLSEAVLEVDADGAYDILRTESGVHRVQRVPATEAKGRTHTSAVSVMILPSF 280 Query: 214 ------------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 D + + + + R + RA GAGGQHVN T+SA+R+THIPTG VV Sbjct: 281 PDSGSGLDSSLNFEDPNSDYYVDPQEVRTEKMRAGGAGGQHVNKTESAIRLTHIPTGTVV 340 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEI----ANIGESSKTEIGWGRQIRSYVL 317 Q RSQH N+ +AW +LRA+L E + RE+ +G G +IR+Y Sbjct: 341 SMQDSRSQHANRKKAWQVLRARLAEARREAREQELVNLRRGAMGGVARMGRGDKIRTYNY 400 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353 D R+ + + VLDG L+ M + Sbjct: 401 G-QNRCTDHRSGLTIHNLDSVLDGGEGLETVMDSVRTW 437 >gi|171693921|ref|XP_001911885.1| hypothetical protein [Podospora anserina S mat+] gi|170946909|emb|CAP73713.1| unnamed protein product [Podospora anserina S mat+] Length = 431 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 91/364 (25%), Positives = 151/364 (41%), Gaps = 37/364 (10%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 L + D + + + + + + K+ + L L Sbjct: 46 LTAEHDQLTAQLAD-NF--D----EKIAKRAGEVHRIAEAFKKFEHAKASLRELEGLLKS 98 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFES---LLSGEADSNDAYLEVHAGAGGTESQDWAN 135 +D D + E + S +EV G GGTE + +A+ Sbjct: 99 DDAEMREMAQEDLAATNEQLAESSRNLSVALTPKHPFADMPCLIEVVPGPGGTEGRFFAD 158 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGI---------KSATLLIKGPNAYGWLKGEQG 186 + +MY + + F+T+ ++ + G + A L + AY +GE G Sbjct: 159 SVFKMYQAYCANKGFRTKVVQYLAADSTGEKGGDGETALQEAVLEVMEEGAYAHFRGEAG 218 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYP------------VVDDSIEIEISESDCRIDTYR 234 +HR+ R+ + + R HTS ++WV P + + I ++ + + R Sbjct: 219 MHRVQRVPATEKSGRTHTSAVAVWVLPSFAENATASDGDWDNPESDFYIDPAEVKSEKMR 278 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 ASGAGGQHVN T+SA+R+THIPTG+ V Q RSQH N+A AW +LR+++ + + REE Sbjct: 279 ASGAGGQHVNKTESAIRLTHIPTGITVSMQDSRSQHTNRADAWRLLRSRIAQKRREAREE 338 Query: 295 IANIGESSK---TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKA 349 A SS ++ G +IR+Y D R ++ + DVL G L + A Sbjct: 339 AARALRSSVLSSAQLTRGDKIRTYNYG-QDRCTDHRAGLDVHNLPDVLRGGDTLGKVIDA 397 Query: 350 TLAI 353 Sbjct: 398 VHGW 401 >gi|296422823|ref|XP_002840958.1| hypothetical protein [Tuber melanosporum Mel28] gi|295637185|emb|CAZ85149.1| unnamed protein product [Tuber melanosporum] Length = 309 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 83/260 (31%), Positives = 125/260 (48%), Gaps = 15/260 (5%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA-EKRKFKTEALEIHDGEEAG--I 165 A +E+ G GG+E+ +A LL++YT + R + + + G E G + Sbjct: 40 PHPFAHLSALVEIRPGTGGSEASLFAGDLLKLYTMYCANIRNWPLSMVSLTAGAEGGDGV 99 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-------- 217 + A ++ AY +GE GVHR+ R+ + R HTS ++ V P + Sbjct: 100 QEAIFEVEASGAYEIFRGEAGVHRVQRVPATEKQGRTHTSTVNVVVLPSFPEVQLGEGEE 159 Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 + I D R+D RA GAGGQHVNTTDSAVR+THIPTG+V Q RSQHKN+A+A Sbjct: 160 DPDSIIDMKDVRVDVMRARGAGGQHVNTTDSAVRMTHIPTGIVAAIQDSRSQHKNRAKAM 219 Query: 278 NMLRAKLYELELQKREEIANIGESS--KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 +L++++ E +RE S K G ++R+Y V D R Sbjct: 220 VVLKSRIAEKRRAEREAEELALRRSVAKVNAGRSDKMRTYNYI-QNRVTDHRCGFSLHDL 278 Query: 336 SDVLDGD-LDDFMKATLAIK 354 ++G+ LD + + Sbjct: 279 PSFMNGETLDSMIDRVRKWQ 298 >gi|322704975|gb|EFY96565.1| putative translation releasing factor RF-1 [Metarhizium anisopliae ARSEF 23] Length = 415 Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats. Identities = 93/371 (25%), Positives = 148/371 (39%), Gaps = 42/371 (11%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 L + +A R L + + Q L +A Sbjct: 31 KALSAEHEALQKSLNAQ---FDSQKA----RRAGELHRVAAALSAWQQSHSSIRDLQAMA 83 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQD 132 +E D + D LQ + ++ + +E G GG E + Sbjct: 84 DDEQDPDLAAIARDELQAEEEKLASLEKNLSASLTPQHPFADMPCMIEFRPGPGGLEGRY 143 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAG----------IKSATLLIKGPNAYGWLK 182 + + L +MY +R ++ L+ + AG ++ A L I+ AY + Sbjct: 144 FTDSLFKMYKALCARRGYRANVLKYEMADAAGDQSSSAGENPVQEAILEIQDQGAYDLFR 203 Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD---------------DSIEIEISESD 227 E G+HR+ RI +S R HTS ++WV P + ++ + Sbjct: 204 SEAGMHRVQRIPSTESKGRVHTSAVAVWVLPSFPEGGSSGGGGEADADDPESDFYVNPQE 263 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 R++T RA GAGGQHVN T+SA+R+TH+PTG V Q RSQ +N+ AW +LR+++ Sbjct: 264 VRVETMRARGAGGQHVNKTESAIRMTHLPTGTTVSMQDHRSQQRNREDAWKLLRSRIAGQ 323 Query: 288 ELQKREEIANIGESS---KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-- 342 + R A +S + +I G +IR+Y D R ++ + DVLDG Sbjct: 324 RAELRMHEAARLRNSVLAQAQITRGDKIRTYNYN-QDRCTDHRAGLDVHNLPDVLDGGET 382 Query: 343 LDDFMKATLAI 353 LD M A Sbjct: 383 LDRVMDAAKEW 393 >gi|295657325|ref|XP_002789232.1| peptide chain release factor 1 [Paracoccidioides brasiliensis Pb01] gi|226284000|gb|EEH39566.1| peptide chain release factor 1 [Paracoccidioides brasiliensis Pb01] Length = 438 Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 98/351 (27%), Positives = 156/351 (44%), Gaps = 32/351 (9%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 + + L +K + N AK + E A+ + + + + LLE + Sbjct: 51 SIADEHASLTSKLAE-SF--NPKTAKRVG-ELATTATALKEWDKAHESISELNALLEDSS 106 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN--DAYLEVHAGAGGTESQDWAN 135 + D L L V + + L LE+ GAGG E+ +AN Sbjct: 107 TDSDLRSLALEDLQTTTASLSVLSENLKQALIPRHPFADLPCLLELRPGAGGDEAGIFAN 166 Query: 136 MLLRMYTRWAEKRKFKT---EALEIHDGEEAGIKSA----TLLIKGPNAYGWLKGEQGVH 188 LLRMYT + R + + + G G + + I+ P +Y L+ E GVH Sbjct: 167 ELLRMYTMFCANRGLRATLLKKESENAGASGGSEDRLAEAVMEIETPGSYETLRTEAGVH 226 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYP--------------VVDDSIEIEISESDCRIDTYR 234 R+ R+ +S R HTS S+ + P D + + I + ++ R Sbjct: 227 RVQRVPATESKGRTHTSAVSVVILPSFPRNGEEGDGELNFDDPNSDFYIDPREVNVEKMR 286 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 ASGAGGQHVN T+SA+R+THIPTG+VV Q RSQH+N+ +AW +LRA++ + + REE Sbjct: 287 ASGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWQLLRARIAQQRREAREE 346 Query: 295 IANIGE----SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 ++G G +IR+Y D R+ + + D+++G Sbjct: 347 EMVKLRRGAMGGVGKMGRGDKIRTYNFG-QNRCTDHRSGLTLHNLVDIMEG 396 >gi|161833777|ref|YP_001597973.1| peptide chain release factor RF2 [Candidatus Sulcia muelleri GWSS] gi|152206267|gb|ABS30577.1| peptide chain release factor RF2 [Candidatus Sulcia muelleri GWSS] Length = 214 Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats. Identities = 94/216 (43%), Positives = 148/216 (68%), Gaps = 4/216 (1%) Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195 ML RMY WAEK FK + + G+ G++S T ++KG + +G+LKGE GVHRLVRISP Sbjct: 1 MLYRMYIMWAEKHNFKIKKINSLQGDIIGLRSITFIVKGLSPFGYLKGENGVHRLVRISP 60 Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 +D++ R HTSF+S+++YP++DD I I+I+ SD +T+R+ G+GGQ+VN +S VR+ H Sbjct: 61 FDNSKR-HTSFASVYIYPLIDDDINIKINTSDISWNTFRSRGSGGQNVNKVESGVRLHHH 119 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315 PT ++++ + +SQ NK +A +L+++L+ +E + + N K +I W QIR+Y Sbjct: 120 PTNIIIENSETKSQFNNKIKALKLLKSRLFYIEKKSKNTTCNKL---KKKIEWSSQIRNY 176 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 ++ PY++VKDLRT E + VL+G++D F+K L Sbjct: 177 IMHPYKLVKDLRTGYETSDIESVLNGEIDIFLKKNL 212 >gi|302830560|ref|XP_002946846.1| hypothetical protein VOLCADRAFT_103257 [Volvox carteri f. nagariensis] gi|300267890|gb|EFJ52072.1| hypothetical protein VOLCADRAFT_103257 [Volvox carteri f. nagariensis] Length = 361 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 105/325 (32%), Positives = 150/325 (46%), Gaps = 37/325 (11%) Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 +L D LL+ +E + Q+ + D A LE+ AG Sbjct: 11 QLEDLAALLKDPDSRVRAMAEEEGRELQQQAAGLTRRLLLALVPRDPRDGRAALLEMRAG 70 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPN------- 176 AGG E+ + LL MY ++A R + + +E+ E G+K + Sbjct: 71 AGGQEAALFCGELLEMYRKFAMSRGWSWQVVELTASEVPGGVKHVVAAVAAGRGAGRRAG 130 Query: 177 ------------------------AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212 YG L E GVHR+ R+ ++ R HTS ++ V Sbjct: 131 GIGDGGEGYDGGEGNSDQDGDAIGVYGTLLPESGVHRVQRVPVTEAQGRVHTSTVAVVVL 190 Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P D +++++ + D RI+T RASGAGGQHVN TDSAVRITH+PTG+VV CQ ERSQH N Sbjct: 191 P-QADEVDVKLRDEDLRIETMRASGAGGQHVNVTDSAVRITHVPTGLVVSCQNERSQHLN 249 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESS-KTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 +A A +LRA+LY+LE+QKR + + S+ +IR+Y P V D R ++ Sbjct: 250 RAAALKILRARLYDLEMQKRAKEMDEQRSALVASADRSERIRTYNF-PQGRVTDHRIHLT 308 Query: 332 KTSPSDVLDG--DLDDFMKATLAIK 354 VL G L M A + Sbjct: 309 LHDLDSVLVGGEGLQRLMGVLRAAR 333 >gi|146161938|ref|XP_001008252.2| Peptidyl-tRNA hydrolase domain containing protein [Tetrahymena thermophila] gi|146146594|gb|EAR88007.2| Peptidyl-tRNA hydrolase domain containing protein [Tetrahymena thermophila SB210] Length = 452 Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats. Identities = 80/342 (23%), Positives = 154/342 (45%), Gaps = 18/342 (5%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + + ++ + L ++ L ++++ + L + E Sbjct: 90 NEYTDIQKILSQEQQQADI-NLEQLRKKINVLQPLNDVFEKLEQNIKTLQELQKQKEESA 148 Query: 81 DCSILQETSDNLQRIKLEVEYK------QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + ++ + + D ++ LEV GAGG+ES +A Sbjct: 149 SDPEMLALIEEEMENSKQLIDELQDECLEQLLPKGKHDDCSEITLEVRGGAGGSESSLFA 208 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEE--AGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 + +MY + ++ ++ G K L + G N Y + E GVH+++R Sbjct: 209 EEVFKMYQAFFAQQGYQFSIDSFQVDMAINKGCKLGVLKVSGTNIYKKMMNESGVHKVIR 268 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R H+S S+ + ++ ++ E D + + R+ GAGGQHVN +SA R+ Sbjct: 269 VPETESKGRLHSSTISVV--VMPVVPMDFKVDEKDLKFEFMRSQGAGGQHVNKVESACRV 326 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311 TH+PTG+ V CQ +R Q +NK +A +L KL+++E++K + + K++IG G + Sbjct: 327 THLPTGISVLCQDDRQQERNKQRALKLLTEKLFQVEVEKSNQ--QQSDQRKSQIGGGDRS 384 Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350 IR+Y P + D RTN+ ++ G+ L++F+ Sbjct: 385 DKIRTYNF-PQGRITDHRTNLTLFGIEKMMKGEFLEEFIDEY 425 >gi|73989052|ref|XP_542584.2| PREDICTED: similar to mitochondrial translational release factor 1 isoform 1 [Canis familiaris] Length = 456 Score = 146 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 102/337 (30%), Positives = 150/337 (44%), Gaps = 31/337 (9%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 K L R L + +EIQ+ L + Q L+ + E Sbjct: 103 KSLNRRHAELAPLAAIYQEIQEAEQAIEELDSMCKSLSKQDEKQLQELALEERQTIAEKI 162 Query: 103 QFES-------LLSGEADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTE 153 + + D ND +EV +G GG Q + + MY ++ + +K E Sbjct: 163 NVLYSELFQSLVPKEKYDKNDVIIEVTSGRTTGGDICQQFTREIFDMYQNYSSYKNWKFE 222 Query: 154 ALEIHDGE------------EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201 L + G+ A I G N Y LK E GVHR+ RI ++R Sbjct: 223 LLNYTPADYGSDLKPCGFVIVGGLHHAAARISGDNVYKHLKYEGGVHRVQRIPEVGLSAR 282 Query: 202 RH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 + + + D +++++ D RIDT+RA GAGGQHVNTTDSAVR+ HIPTG+ Sbjct: 283 MQRIHTGTMSVIVLPQPDEVDVKVDPKDLRIDTFRAKGAGGQHVNTTDSAVRLVHIPTGL 342 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW---GRQIRSYV 316 VV+CQQERSQ KNK A +LRA+LY+ ++K + + K ++G +IR+Y Sbjct: 343 VVECQQERSQIKNKEIALRVLRARLYQQIIEK--DKCQQQSTRKLQVGTRAQSERIRTYN 400 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351 V D R E + L G+ LD ++ L Sbjct: 401 F-TQDRVTDHRIAYEVRGIKEFLCGEKCLDQLIQRLL 436 >gi|156546340|ref|XP_001606563.1| PREDICTED: similar to ENSANGP00000017484 [Nasonia vitripennis] Length = 402 Score = 146 bits (367), Expect = 6e-33, Method: Composition-based stats. Identities = 94/293 (32%), Positives = 158/293 (53%), Gaps = 8/293 (2%) Query: 53 DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112 I +I + + + L+E + + ++ S+ + +++ E + Sbjct: 85 KTLIDERTKIYENIKNLAELVEEDKDMKKLAEEEKLSNEARLKEIDNELFSALAQSLSGD 144 Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 + ++ LE+ AG GG E+ + LL MY + + + +E+ + + G + A+++I Sbjct: 145 NFDEIILEITAGVGGQEAMLFVKNLLEMYIKHLSYLGYSYDIIEMDESPQGGCRHASIMI 204 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 G ++ L+ E GVHR+ R+ + + R HTS S+ V P + I++EI D RIDT Sbjct: 205 SGKESFEKLRHEAGVHRVQRVPATEKSGRIHTSVVSVGVLPQ-PNDIQVEIHAKDLRIDT 263 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASGAGGQHVNTT+SAVR+TH+PTG+ V+CQ +RSQ +N+ A LRAK+YE +L ++ Sbjct: 264 MRASGAGGQHVNTTNSAVRVTHLPTGMSVECQTDRSQIRNRELAMAKLRAKMYEQKLARQ 323 Query: 293 EEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLR-TNIEKTSPSDVLDG 341 + + E K ++G G + IR+Y V D R +N + L+G Sbjct: 324 --LRSASEMRKQQMGMGERHEKIRTYNFN-QDRVTDHRLSNGTLHNLKGFLEG 373 >gi|325089543|gb|EGC42853.1| peptide chain release factor 1 [Ajellomyces capsulatus H88] Length = 438 Score = 145 bits (366), Expect = 8e-33, Method: Composition-based stats. Identities = 92/368 (25%), Positives = 154/368 (41%), Gaps = 40/368 (10%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 + S L ++ + + +++ L + +KE + L L Sbjct: 51 SIADEHSTLTSRLAE-TF--DP----KIVKRAGELATTATTLKEWEKANESISELNNLLE 103 Query: 78 EEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + S L+ + R + + LE+ GAGG E+ Sbjct: 104 DPSTDSELRSLALEDLRSAKASLAILSSNLKQTLIPRHPFADLPCLLELRPGAGGEEAGI 163 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-------KSATLLIKGPNAYGWLKGEQ 185 +AN LLRMYT + R + L+ A + I+ P +Y L+ E Sbjct: 164 FANELLRMYTMFCSNRSLRATLLKKECENAGANGGSEDRLIEAVMEIETPGSYETLRTEA 223 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI--------------EIEISESDCRID 231 GVHR+ R+ ++ R HTS S+ + P +I + I + ++ Sbjct: 224 GVHRVQRVPATENKGRTHTSAVSVVILPSFPSNIGEGDSELNFDDPNSDYYIDPQEVNVE 283 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 RA GAGGQHVN T+SA+R+THIPTG+VV Q RSQH+N+ +AW++LRA++ + + Sbjct: 284 KMRAGGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWHLLRARIAQQRREA 343 Query: 292 REEIANIGE----SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDD 345 REE ++G G +IR+Y D R+ + + +++G L+ Sbjct: 344 REEEMVKLRRGVMGGVAKMGRGDKIRTYNFG-QNRCTDHRSGLTLHNLGSIMEGGDGLEK 402 Query: 346 FMKATLAI 353 M + Sbjct: 403 IMDSVRGW 410 >gi|240279273|gb|EER42778.1| peptide chain release factor 1 [Ajellomyces capsulatus H143] Length = 438 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 92/368 (25%), Positives = 154/368 (41%), Gaps = 40/368 (10%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 + S L ++ + + +++ L + +KE + L L Sbjct: 51 SIADEHSTLTSRLAE-TF--DP----KIVKRAGELATTATTLKEWEKANESISELNNLLE 103 Query: 78 EEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + S L+ + R + + LE+ GAGG E+ Sbjct: 104 DPSTDSELRSLALEDLRSAKASLAILSSNLKQTLIPRHPFADLPCLLELRPGAGGEEAGI 163 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-------KSATLLIKGPNAYGWLKGEQ 185 +AN LLRMYT + R + L+ A + I+ P +Y L+ E Sbjct: 164 FANELLRMYTMFCSNRSLRATLLKKECENAGANGGSEDRLIEAVMEIETPGSYETLRTEA 223 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI--------------EIEISESDCRID 231 GVHR+ R+ ++ R HTS S+ + P +I + I + ++ Sbjct: 224 GVHRVQRVPATENKGRTHTSAVSVVILPSFPSNIGEGDSELNFDDPNSDYYIDPQEVNVE 283 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 RA GAGGQHVN T+SA+R+THIPTG+VV Q RSQH+N+ +AW++LRA++ + + Sbjct: 284 KMRAGGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWHLLRARIAQQRREA 343 Query: 292 REEIANIGE----SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDD 345 REE ++G G +IR+Y D R+ + + +++G L+ Sbjct: 344 REEEMVKLRRGVMGGVAKMGRGDKIRTYNFG-QNRCTDHRSGLTLHNLGSIMEGGDGLEK 402 Query: 346 FMKATLAI 353 M + Sbjct: 403 IMDSVRGW 410 >gi|19113899|ref|NP_592987.1| mitochondrial peptide chain release factor (predicted) [Schizosaccharomyces pombe 972h-] gi|1172908|sp|Q09691|RF1M_SCHPO RecName: Full=Putative peptide chain release factor 1, mitochondrial; Short=MRF-1; Short=MtRF-1; Flags: Precursor gi|1052800|emb|CAA90504.1| mitochondrial peptide chain release factor (predicted) [Schizosaccharomyces pombe] Length = 396 Score = 145 bits (366), Expect = 9e-33, Method: Composition-based stats. Identities = 91/327 (27%), Positives = 154/327 (47%), Gaps = 12/327 (3%) Query: 37 QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK 96 + AK + R + + NA S K + +++ D + + + + + + Sbjct: 64 NDTDLAKRIAR-LRRVHNAYSKFKSLSEQISDLKQMEAQESDAEVKMMAVTEINEISNKI 122 Query: 97 -LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 +E + L ++ + A +E+ G GGTE+ +AN L+ MY ++A + + + + Sbjct: 123 PKSIEDLENTLLPQADSYALPALIEIRPGVGGTEAAIFANELVEMYFQYANFKGWNCKFI 182 Query: 156 EIHD-GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 I A I+G AYG L E GVHR+ R ++ R HTS +S+ V P Sbjct: 183 SKSAVQGLEAITEAIFSIEGEGAYGHLMLEGGVHRVQRTPATETKGRVHTSTASVIVLPQ 242 Query: 215 VDDSIEIE-ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 V + S+ +I+ R+ GAGGQHVN T+SAVR+THIPTG+ V Q RSQH+NK Sbjct: 243 VSNDESSSLYDSSEVKIEVMRSRGAGGQHVNRTESAVRLTHIPTGITVSMQDSRSQHQNK 302 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNI 330 +A+ +L ++L L K E + K ++ ++R+Y V D R + Sbjct: 303 EKAFLVLNSRLAALNAAKENEAERL--KRKNQVTSSDRSEKLRTYNFN-QNRVTDHRIGL 359 Query: 331 EKTSPSDVLDGD--LDDFMKATLAIKK 355 S + G+ D+F++ + Sbjct: 360 SMHDLSTFMQGEEKFDEFLEKIRIWNR 386 >gi|302759755|ref|XP_002963300.1| hypothetical protein SELMODRAFT_405078 [Selaginella moellendorffii] gi|300168568|gb|EFJ35171.1| hypothetical protein SELMODRAFT_405078 [Selaginella moellendorffii] Length = 509 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 102/306 (33%), Positives = 162/306 (52%), Gaps = 24/306 (7%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 ++ + + + +KE+ ++ + LA E + + + + + + Sbjct: 2 IKALRAKEKEVIGLKELVKESVEDEEMRRLASGELQTATREVRDAQHDVLLELIPKDEAD 61 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 S GAGG E+ +A+ L +MY ++A ++ E L I + G Sbjct: 62 SR----------------GAGGDEASIFASDLFKMYDKYAANNSWRFEVLSITTTDTRGY 105 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K A+ I G YG LK E GVHR+ R+ + R HTS +S+ + P + I++EI Sbjct: 106 KEASAAISGDGVYGALKFESGVHRVQRVPVTEKAGRIHTSTASVAILP-EANEIDVEIRN 164 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 + +IDTYRA GAGGQHVNTT SAVR+TH PTG+VV Q ERSQHKNKA+A ++L A+LY Sbjct: 165 DEIKIDTYRAGGAGGQHVNTTCSAVRVTHTPTGIVVAIQDERSQHKNKAKALSILYARLY 224 Query: 286 ELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG- 341 ELE + +A+ E + +IG +IR+Y P V D R + + + +++G Sbjct: 225 ELERSR--AVASRSELRQDQIGSSDRSERIRTYNF-PQGRVTDHRVGVTQHAIEQIMEGI 281 Query: 342 DLDDFM 347 D+D+++ Sbjct: 282 DVDNWI 287 >gi|147836146|emb|CAN74766.1| hypothetical protein VITISV_041859 [Vitis vinifera] Length = 450 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 87/343 (25%), Positives = 164/343 (47%), Gaps = 5/343 (1%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 + + A R+ +LW +V ++ ++ + + +K++ + + ++ Sbjct: 106 LELEEA-SRIRQ-EEMIRKYNLWDDVTKSNEILGKLADSSKVVDTLKDLTYKAEEAKLIT 163 Query: 74 ELALEED-DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 +L + + + ++ + + + + LL G+ D A L + AG G S+ Sbjct: 164 QLVEMDAINHGLFEQAYNASVDVSKFLYQYEMSKLLRGQFDMEGACLTIKAGPRGIYSEI 223 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA LL MYT+WAEK+ +K +E + + GIKSAT+ + YG+L GE+GVH ++R Sbjct: 224 WAEQLLSMYTKWAEKQGYKGRVVEKYASKNGGIKSATIEFESEYGYGYLSGERGVHHMIR 283 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 S +S T + + V P+ ++ + + G T AV I Sbjct: 284 SSDDESILHEQTGSAVVDVIPLFLETAPDLQIDDGDLR--ISSPSCHGVEQGRTGHAVCI 341 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 HIPTG+ VQ ERS NK +A N L+AKL +++ + W ++ Sbjct: 342 QHIPTGISVQSSGERSHFANKMRALNRLKAKLVVTAMEQGIPEVGGIKREAIADMWKQET 401 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R YV P ++V+D++T+I+ + VLDG+++ + A +++++ Sbjct: 402 RRYVFHPNKLVQDVKTDIQLPDLNSVLDGNIEPLIGANISMRQ 444 >gi|290982185|ref|XP_002673811.1| predicted protein [Naegleria gruberi] gi|284087397|gb|EFC41067.1| predicted protein [Naegleria gruberi] Length = 324 Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats. Identities = 102/260 (39%), Positives = 146/260 (56%), Gaps = 17/260 (6%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKS 167 + +++A +E+ G GG E+ +A L +MY +A KR +K E L + G K Sbjct: 47 HQISPNSNAIIEIRPGTGGDEASLFAMELFKMYEFYATKRGWKFEVLSLSANNGGEGCKE 106 Query: 168 ATLLIKGPN--------AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 LI G + YG +K E GVHR+ R+ +S R HTS +SI V P V ++ Sbjct: 107 GIALISGSSYGDDEGLGVYGCMKFESGVHRVQRVPATESQGRVHTSSASIVVLPEVTEAD 166 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 I+ +D RIDT RASGAGGQHVNTTDSAVR+THIPTG VV ERSQH+NK +A+ + Sbjct: 167 VK-INLADVRIDTMRASGAGGQHVNTTDSAVRLTHIPTGTVVCIADERSQHRNKEKAFKI 225 Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPS 336 L ++LY + Q+ E+I + K +IG G + IR+Y P + D R + + Sbjct: 226 LHSRLY--QKQQDEKIQKMSSERKEQIGSGDRSDKIRTYNF-PQDRITDHRISFSQFGLD 282 Query: 337 DVLDGD-LDDFMKATLAIKK 355 ++DG+ LD F + +K Sbjct: 283 KMMDGEILDSFFEILAKQEK 302 >gi|332375689|gb|AEE62985.1| unknown [Dendroctonus ponderosae] Length = 400 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 93/306 (30%), Positives = 153/306 (50%), Gaps = 14/306 (4%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL-- 108 L I+ I + + + + + L ELA D + + ++ Sbjct: 77 ELQPVINIITKRDELITNIVDLKELAASPDKDLAALAKEEETELETKLYHLEETLIDALL 136 Query: 109 --SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 E + LEV AG GG E+ +A + MY + + +K + ++ + GI+ Sbjct: 137 PEDREDSFDTIILEVQAGVGGQEAMLFAQEMFDMYCSFISLKGWKYDIVDYMGTDLGGIR 196 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 ++L+ G AY + K E GVHR+ RI + +SR HTS S+ P + I+I I Sbjct: 197 RGSILVNGSKAYKFFKHEGGVHRVQRIPSTEKSSRIHTSTVSVTALPQ-PNEIDIRIDPK 255 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D +I+T R++GAGGQHVNTTDSAVRI H+PT ++V+CQ +RSQ KN+ A LRA LY+ Sbjct: 256 DLKIETKRSTGAGGQHVNTTDSAVRIVHLPTNIMVECQVDRSQIKNRKLALTKLRALLYQ 315 Query: 287 LELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLR-TNIEKTSPSDVLD-G 341 EL+++ + K+++ + IR+Y + D R + + + ++ G Sbjct: 316 RELEEQLAQQE--STKKSQVSSNNRNEKIRTYNFN-QDRITDHRLSGVHFHNIKMFMETG 372 Query: 342 -DLDDF 346 DL++ Sbjct: 373 ADLEEL 378 >gi|299469865|emb|CBN76719.1| conserved unknown protein [Ectocarpus siliculosus] Length = 364 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 100/348 (28%), Positives = 171/348 (49%), Gaps = 22/348 (6%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ R + + V E + +E L+ + +++++ + L E+ Sbjct: 5 LEHMKGRHEEIVESMTKGEV--PVREMGSVGKELGRLEAVLDLQAKVEEKAAEIQDLEEV 62 Query: 76 ALEEDDCSILQETSDNLQRIKLE----------VEYKQFESLLSGEADSNDAYLEVHAGA 125 + + + + L E DS +A LEV +G+ Sbjct: 63 MQATNAGGAEADREMHGIAKEEHADCTAALEKLRLDLTSLLLPRDEGDSKNALLEVRSGS 122 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A L MY R+AE + +K E + + G + A+ I+G + YG LK E Sbjct: 123 GGDEAAAFAKELFEMYRRFAELKGWKFEGMTCSSIDAGGYREASASIRGEDVYGSLKFEN 182 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ ++ R HTS +S+ V + + +++++ +SD R + +RASGAGGQHVNT Sbjct: 183 GVHRVQRVP--SNSPRLHTSAASVVVM-MEAEEMDLKLEQSDLRFEAFRASGAGGQHVNT 239 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T+SAVRITH+PTG+ Q ERSQH NK +A +LR++++E+ + + Sbjct: 240 TESAVRITHVPTGITASIQDERSQHSNKEKALKVLRSRVFEVRRDEI--ARKEAAVRASA 297 Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKA 349 +G G +IR+Y P + D R N + ++ G+ L DF++A Sbjct: 298 VGSGDRSERIRTYNF-PQDRITDHRANYSRHGWEAMMRGEMLGDFLEA 344 >gi|225559538|gb|EEH07820.1| peptide chain release factor 1 [Ajellomyces capsulatus G186AR] Length = 438 Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats. Identities = 94/368 (25%), Positives = 154/368 (41%), Gaps = 40/368 (10%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 + S L ++ + + A + L + +KE + L L Sbjct: 51 SIADEHSTLTSRLAE-TF--DPKTA----KRAGELATTATTLKEWEKANESISELNNLLE 103 Query: 78 EEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + S L+ + R + + LE+ GAGG E+ Sbjct: 104 DPSTDSELRSLALEDLRSAKASLTILSSNLKQTLIPRHPFADLPCLLELRPGAGGEEAGI 163 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-------KSATLLIKGPNAYGWLKGEQ 185 +AN LLRMYT + R +T L+ A + I+ P +Y L+ E Sbjct: 164 FANELLRMYTMFCSNRSLRTTLLKKECENAGANGGSEDRLIEAVMEIETPGSYETLRTEA 223 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI--------------EIEISESDCRID 231 GVHR+ R+ ++ R HTS S+ + P +I + I + ++ Sbjct: 224 GVHRVQRVPTTENKGRTHTSAVSVVILPSFSSNIGEGDSELNFDDPNSDYYIDPQEVNVE 283 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 RA GAGGQHVN T+SA+R+THIPTG+VV Q RSQH+N+ +AW++LRA++ + + Sbjct: 284 KMRAGGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWHLLRARIAQQRREA 343 Query: 292 REEIANIGE----SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDD 345 REE ++G G +IR+Y D R+ + + +++G L+ Sbjct: 344 REEEMVKLRRGVMGGVAKMGRGDKIRTYNFG-QNRCTDHRSGLTLHNLGSIMEGGDGLEK 402 Query: 346 FMKATLAI 353 M + Sbjct: 403 IMDSVRGW 410 >gi|56203458|emb|CAI18897.1| mitochondrial translational release factor 1-like [Homo sapiens] Length = 231 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 88/200 (44%), Positives = 114/200 (57%), Gaps = 9/200 (4%) Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E+ G G++ A+ I G AY +K E GVHR+ R+ + R HTS ++ + P Sbjct: 19 EVTAGVGGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQ- 77 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 I + I+ D RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK Sbjct: 78 PTEINLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKEL 137 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEK 332 A LRAKLY + L+ EEI + K +I G +IR+Y P V D R N Sbjct: 138 AMTKLRAKLYSMHLE--EEINKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKTL 194 Query: 333 TSPSDVLDGD--LDDFMKAT 350 + GD LD+ +++ Sbjct: 195 HDLETFMQGDYLLDELVQSL 214 >gi|148703820|gb|EDL35767.1| mitochondrial translational release factor 1, isoform CRA_b [Mus musculus] Length = 440 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 96/337 (28%), Positives = 152/337 (45%), Gaps = 20/337 (5%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 ++ + L+ + + +N + + L R L + +EIQ+ L L Sbjct: 99 EDLNKEYQTLDQCLQ--GISENEGDRRALHRRHAQLAPLAAVYQEIQEAEQAIEELESLC 156 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFES-------LLSGEADSNDAYLEVHAG--AGG 127 + Q + ++ + + + D +D LEV +G GG Sbjct: 157 KSLNKQDEKQLQELVSEERQIIDQKIHRLYSELLERLVPKEKYDWSDVILEVTSGRTTGG 216 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 Q + + MY ++ + +K E L + G+ A I G + Y LK E G+ Sbjct: 217 DICQQFTREIFDMYQNYSYYKHWKFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 276 Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 HR+ RI +SR + + + D +++++ D R+DT+RA GAGGQHVNT Sbjct: 277 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKVDPKDLRVDTFRARGAGGQHVNT 336 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVR+ HIPTG+VV+CQQERSQ KNK A +LRA+LY+ ++K K + Sbjct: 337 TDSAVRLVHIPTGLVVECQQERSQLKNKEIALRVLRARLYQQIIEKDRCQQQNA--RKLQ 394 Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 +G +IR+Y V D R E V+ Sbjct: 395 VGTRAQSERIRTYNF-TQDRVTDHRIAYEVRDI-KVM 429 >gi|332213669|ref|XP_003255947.1| PREDICTED: peptide chain release factor 1-like, mitochondrial isoform 3 [Nomascus leucogenys] Length = 344 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 138/305 (45%), Gaps = 45/305 (14%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L I + E + L + LL E+ E + + I + S Sbjct: 63 ELLAVIKLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D ND LEV AG GG G++ A+ Sbjct: 123 ETDENDLILEVTAGVGG------------------------------------GLRHASA 146 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G AY +K E GVHR+ R+ + R HTS ++ + P I + I+ D RI Sbjct: 147 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQ-PTEINLVINPKDLRI 205 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK A LRAKLY + L+ Sbjct: 206 DTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLE 265 Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345 EE + K +I G +IR+Y P V D R N + GD LD+ Sbjct: 266 --EETNKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINRTLHDLETFMQGDYLLDE 322 Query: 346 FMKAT 350 +++ Sbjct: 323 LVQSL 327 >gi|195116636|ref|XP_002002858.1| GI17608 [Drosophila mojavensis] gi|193913433|gb|EDW12300.1| GI17608 [Drosophila mojavensis] Length = 393 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 98/312 (31%), Positives = 154/312 (49%), Gaps = 11/312 (3%) Query: 48 ERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107 LD ++ +++ + + +L E+D+ +N L + ++ Sbjct: 57 RLTRLDPVVNSLEKHRALQRNITSEKDLLAEKDEDMRALMEEENNVYTSLLRKQEEDMLQ 116 Query: 108 ----LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163 LS + D EV+AGAGG E+ +A L MYT + + ++ E + + Sbjct: 117 ELLALSDDEDYPAVIFEVNAGAGGQEAMLFAQELYDMYTSYFDHMGWEYEEFDRETTDIG 176 Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 G++ A L + P AY WL+ E GVHR+ R+ + + R HTS +SI V P ++++I Sbjct: 177 GLRHANLQVNDPEAYNWLRFEAGVHRVQRVPATEKSGRIHTSTASITVIP-RPADVQVQI 235 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +E D +I+T RASGAGGQHVNTTDSAVRI H+P+G+ V+ Q ERSQ KN+ A L+AK Sbjct: 236 AERDLKIETKRASGAGGQHVNTTDSAVRIVHLPSGLAVESQSERSQLKNREVALKRLQAK 295 Query: 284 LYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPYQMVKDLRT--NIEKTSPSDVLD 340 L +LQ E + + + +IR+Y V D R + L+ Sbjct: 296 LIHQQLQSAEATKKATRKAQQGNLNRNEKIRTYNFV-QDRVTDHRVQQGGTLHNLPGFLE 354 Query: 341 G--DLDDFMKAT 350 G L ++ Sbjct: 355 GGQQLSGLIERL 366 >gi|194387338|dbj|BAG60033.1| unnamed protein product [Homo sapiens] Length = 344 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 107/305 (35%), Positives = 139/305 (45%), Gaps = 45/305 (14%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L I + E + L + LL E+ E + + I + S Sbjct: 63 ELLAVIKLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D ND LEV AG GG G++ A+ Sbjct: 123 ETDENDLILEVTAGVGG------------------------------------GLRHASA 146 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G AY +K E GVHR+ R+ + R HTS ++ + P I + I+ D RI Sbjct: 147 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQ-PTEINLVINPKDLRI 205 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK A LRAKLY + L+ Sbjct: 206 DTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLE 265 Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345 EEI + K +I G +IR+Y P V D R N + GD LD+ Sbjct: 266 --EEINKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLLDE 322 Query: 346 FMKAT 350 +++ Sbjct: 323 LVQSL 327 >gi|328463686|gb|EGF35274.1| peptide chain release factor 1 [Lactobacillus rhamnosus MTCC 5462] Length = 198 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 75/193 (38%), Positives = 113/193 (58%), Gaps = 7/193 (3%) Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 K ++I G N Y LK E G HR+ R+ +S R HTS +++ V P D ++++I Sbjct: 1 KEVVVMITGDNVYSKLKYENGAHRVQRVPVTESAGRVHTSTATVGVMP-EYDEVDLKIDP 59 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D R D YR+SGAGGQHVN T SAVR+THIPTG+VV Q ERSQ +N+A+A +LR+++Y Sbjct: 60 KDIRTDVYRSSGAGGQHVNKTSSAVRMTHIPTGIVVSMQDERSQQENRARAMQILRSRVY 119 Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + + +E ++ K IG G +IR+Y P V D R + +++G+ Sbjct: 120 DYYETENQE--KYDQNRKNAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGE 176 Query: 343 LDDFMKATLAIKK 355 LD+ + A + + Sbjct: 177 LDEIIDALIVHDQ 189 >gi|121727222|ref|ZP_01680389.1| peptide chain release factor 1 [Vibrio cholerae V52] gi|121630467|gb|EAX62860.1| peptide chain release factor 1 [Vibrio cholerae V52] Length = 193 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 78/184 (42%), Positives = 115/184 (62%), Gaps = 6/184 (3%) Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 AYG LK E G HR+ R+ ++ R HTS ++ V P + ++ EI SD +IDT+R Sbjct: 2 DGAYGTLKFESGGHRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFR 61 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 +SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E KR Sbjct: 62 SSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAA 121 Query: 295 IANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 I ++ + +G G +IR+Y P V D R N+ ++V++GD+ + + Sbjct: 122 E--ISDTRRNLLGSGDRSDRIRTYNY-PQGRVSDHRINLTVYRLTEVMEGDMQSLIDPVI 178 Query: 352 AIKK 355 + Sbjct: 179 HEHQ 182 >gi|71028468|ref|XP_763877.1| peptide chain release factor 2 [Theileria parva strain Muguga] gi|68350831|gb|EAN31594.1| peptide chain release factor 2, putative [Theileria parva] Length = 376 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 91/275 (33%), Positives = 143/275 (52%), Gaps = 18/275 (6%) Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK----- 149 KL+ K E + + D N L + +G GG+ES DW +L MY ++ Sbjct: 65 CKLKDSNKSAELDPTRKYDRNYCKLIIKSGVGGSESFDWCRILAEMYKKFISSYDPPPGP 124 Query: 150 -----FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204 + + +++ G G + + G AY LKGE G HRL+R SP++S+ +R T Sbjct: 125 NLPTSLRLKEVDVCPGTSGGFRRVEYDVIGDYAYRLLKGENGTHRLIRNSPFNSDHKRQT 184 Query: 205 SFSSIWVYPVVDDSI--------EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +F+++ P++ D+ +I + D I++ R+SG GGQ+VN ++AVR+ H P Sbjct: 185 TFATVQAVPILSDTDEEIINFKKNRQILKKDLIIESMRSSGKGGQNVNKVETAVRVYHKP 244 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316 TG+ V+ QQER+ +N+ A ML + E L+K E + + + WG IR+Y Sbjct: 245 TGLSVKVQQERTNTQNREIAIRMLTKLVDEHYLKKLNEKLDDIKGADLVGTWGSHIRTYT 304 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 L P Q VKD RTN E ++VL+GDL + L Sbjct: 305 LNPEQRVKDHRTNFETAKATNVLNGDLLPIILNLL 339 >gi|297679454|ref|XP_002817545.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like isoform 2 [Pongo abelii] Length = 344 Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 138/305 (45%), Gaps = 45/305 (14%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L I + E + L + LL E+ E + + I + S Sbjct: 63 ELLAVIKLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D ND LEV AG GG G++ A+ Sbjct: 123 ETDENDLILEVTAGVGG------------------------------------GLRQASA 146 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G AY +K E GVHR+ R+ + R HTS ++ + P I + I+ D RI Sbjct: 147 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQ-PTEINLVINPKDLRI 205 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK A LRAKLY + L+ Sbjct: 206 DTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLE 265 Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345 EE + K +I G +IR+Y P V D R N + GD LD+ Sbjct: 266 --EETNKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKTLHDLETFMRGDYLLDE 322 Query: 346 FMKAT 350 +++ Sbjct: 323 LVQSL 327 >gi|121591760|ref|ZP_01678968.1| peptide chain release factor 1 [Vibrio cholerae 2740-80] gi|121546377|gb|EAX56631.1| peptide chain release factor 1 [Vibrio cholerae 2740-80] Length = 242 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 72/234 (30%), Positives = 112/234 (47%), Gaps = 3/234 (1%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72 ++ V+R + DP + + + + L +E L+ + Q D + Sbjct: 9 LESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + E E I+ + Q L D + +LE+ AGAGG E+ Sbjct: 69 AQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +A L RMY+R+AEK+ ++ E + + E G K + G AYG LK E G HR+ R Sbjct: 129 FAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 + ++ R HTS ++ V P + ++ EI SD +IDT+R+SGAGGQHVNTT Sbjct: 189 VPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTT 242 >gi|114609865|ref|XP_001140693.1| PREDICTED: mitochondrial translational release factor 1-like isoform 4 [Pan troglodytes] Length = 344 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 106/305 (34%), Positives = 138/305 (45%), Gaps = 45/305 (14%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L I + E + L + LL E+ E + + I + S Sbjct: 63 ELLAVIRLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D ND LEV AG GG G++ A+ Sbjct: 123 ETDENDLILEVTAGVGG------------------------------------GLRHASA 146 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G AY +K E GVHR+ R+ + R HTS ++ + P I + I+ D RI Sbjct: 147 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQ-PTEINLVINPKDLRI 205 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK A LRAKLY + L+ Sbjct: 206 DTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLE 265 Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345 EE + K +I G +IR+Y P V D R N + GD LD+ Sbjct: 266 --EETNKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLLDE 322 Query: 346 FMKAT 350 +++ Sbjct: 323 LVQSL 327 >gi|218297203|ref|ZP_03497865.1| Class I peptide chain release factor [Thermus aquaticus Y51MC23] gi|218242480|gb|EED09019.1| Class I peptide chain release factor [Thermus aquaticus Y51MC23] Length = 176 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 85/163 (52%), Positives = 108/163 (66%), Gaps = 1/163 (0%) Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 R SP+D++ RRHTSF+ + V P VDD++E+ I D RID +R+ G GGQ VNTTDSAVR Sbjct: 2 RPSPFDASGRRHTSFAGVEVMPEVDDTVEVVIRPEDLRIDVFRSQGHGGQGVNTTDSAVR 61 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 I H+PTG+ V CQ RSQ KNK A +LR++L+ELE +K++E I WG Q Sbjct: 62 IVHLPTGITVTCQTTRSQIKNKELALKVLRSRLFELEWKKKQEELQKLRGEVRPIEWGSQ 121 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 IRSYVL VKD RT + + P +VLDGDL DF+ A L K Sbjct: 122 IRSYVLDKQ-YVKDHRTGLMRFDPQNVLDGDLMDFIWAGLEWK 163 >gi|302811530|ref|XP_002987454.1| hypothetical protein SELMODRAFT_426218 [Selaginella moellendorffii] gi|300144860|gb|EFJ11541.1| hypothetical protein SELMODRAFT_426218 [Selaginella moellendorffii] Length = 505 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 102/313 (32%), Positives = 166/313 (53%), Gaps = 16/313 (5%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLILLELALEEDDCSILQETSDN 91 + + + +E ++LD ++ IK ++ + + L++ ++E+++ L Sbjct: 17 FHAHGEKLIKMNKELRNLDYSVDMIKALRAKEKEVIGLKELVKESVEDEEMRRLASGELQ 76 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 ++ L + +++ GAGG E+ +A+ L +MY ++A ++ Sbjct: 77 TATREVRDAQHDVLLELIPKDEADSR------GAGGDEASIFASDLFKMYEKYAANNSWR 130 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 E L I + K A+ I G YG LK E GVHR+ R+ + R HTS +S+ + Sbjct: 131 FEVLSITTTDTRCYKEASAAISGDGVYGALKFESGVHRVQRVPVTEKAGRIHTSTASVAI 190 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P + I++EI + +IDTYRA GAGGQHVNTT SAVR+TH PTG+VV Q ERSQHK Sbjct: 191 LP-EANEIDVEIRNDEIKIDTYRAGGAGGQHVNTTCSAVRVTHAPTGIVVAIQDERSQHK 249 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRT 328 NKA+A ++L A+LYELE + A+ E + +IG +IR+Y P V D R Sbjct: 250 NKAKALSILYARLYELERSR--AAASRSELRQDQIGSSDRSERIRTYNF-PQGRVTDRRV 306 Query: 329 NIEKTSPSDVLDG 341 + + + +++G Sbjct: 307 GVTQHAIEQIMEG 319 >gi|164660096|ref|XP_001731171.1| hypothetical protein MGL_1354 [Malassezia globosa CBS 7966] gi|159105071|gb|EDP43957.1| hypothetical protein MGL_1354 [Malassezia globosa CBS 7966] Length = 395 Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats. Identities = 95/345 (27%), Positives = 154/345 (44%), Gaps = 37/345 (10%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 + + L+ +++L L E D +L+ L +++ E + + Sbjct: 36 SQRIKDLEAVHKTWSAWREQLQCVQDTQRLCETEKDKDMLEMAEQELSQMRDEADARHEA 95 Query: 106 SLLSGEADSNDAY-----LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 ++S +E+ G GG ES + +LRMY ++ E R K + + Sbjct: 96 LKQQILSNSRSIQSKGAIMELRQGVGGQESCLFLGEMLRMYIKFCETRAQKAQDEDDPSM 155 Query: 161 EEAGI----------------------KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 AG + A L I GPNA+ L+ E GVHR+ RI + Sbjct: 156 LGAGWSTDLLSATPVDVSATSGAGDAYREAILQIHGPNAFEALRFEAGVHRVQRIPATQN 215 Query: 199 NSRRHTSFSSIWVYPVVDDSI--EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 + TS +I V P+ ++ + + D R++T RA GAGGQHVN T+SAVR+TH P Sbjct: 216 LGKLQTSTMAIIVLPMQAENDVSKDIVDSKDVRVETMRARGAGGQHVNRTESAVRLTHDP 275 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQIRSY 315 +G+ V Q RSQH+N+ +AW++LRA+L ++ LQK S+ ++R+Y Sbjct: 276 SGITVSMQDSRSQHQNRVKAWDVLRARLLDIHLQKEASENRALRRSQVASAERSERVRTY 335 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGD------LDDFMKATLAIK 354 P V D R I + +DGD L ++ +A + Sbjct: 336 NF-PQDRVTDHRIGISLSDIHRFMDGDDSSGTGLSYLIEELMARE 379 >gi|297304301|ref|XP_001086824.2| PREDICTED: peptide chain release factor 1-like, mitochondrial-like, partial [Macaca mulatta] Length = 346 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 90/259 (34%), Positives = 126/259 (48%), Gaps = 5/259 (1%) Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + E E ++ E LL E + E E + ++ + E + + + Sbjct: 73 NEKEQELRETEPLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSEETDENELQD 132 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 LE E G++ A+ I G AY +K E GVHR+ R+ R HTS ++ + P Sbjct: 133 LEYFPSEIGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTQKQGRIHTSTMTVAILPQ 192 Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 I + I+ D RIDT +ASGAGGQHVNTTDSAVRI H+PT VV +CQQERSQ KN+ Sbjct: 193 -PTEINLVINPKDLRIDTKQASGAGGQHVNTTDSAVRIVHLPTSVVSKCQQERSQLKNRE 251 Query: 275 QAWNMLRAKLYELELQKREEIANIGES-SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 A LRAKLY + L+K G +IR+Y P V D R + Sbjct: 252 LAMTKLRAKLYSMHLEKETNKRQNARKIRIGSKGRSEKIRTYNF-PQNRVTDHRISKTLH 310 Query: 334 SPSDVLDGD--LDDFMKAT 350 + GD LD+ +++ Sbjct: 311 DLETFMQGDDLLDELVQSL 329 >gi|72071048|ref|XP_793802.1| PREDICTED: similar to Mitochondrial translational release factor 1-like [Strongylocentrotus purpuratus] gi|115937039|ref|XP_001184371.1| PREDICTED: similar to Mitochondrial translational release factor 1-like [Strongylocentrotus purpuratus] Length = 298 Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats. Identities = 93/256 (36%), Positives = 140/256 (54%), Gaps = 9/256 (3%) Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 L S E D ND +E AG GG E+ +A + MY R+A R + LE + G Sbjct: 27 LLLPSEETDDNDVIMEFTAGVGGQEAMLFAADMFEMYQRFAAYRGWTFSVLEYFTTDMGG 86 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++ A++ + G AY L+ E GVHR+ R+ +S R HTS +I V P I++++ Sbjct: 87 LRHASVSMSGDQAYLLLRQEAGVHRVQRVPRTESKGRIHTSTMAIAVLP-QPKEIDLKLD 145 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 D R++T +ASGAGGQHVNTTDSAVRITH+PTG+ + QQERSQHKN+ A ML+ ++ Sbjct: 146 PKDLRVETKKASGAGGQHVNTTDSAVRITHLPTGISAESQQERSQHKNRFIAMTMLQTRI 205 Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 Y L ++ ++ +++G G +IR+Y Q + D R + L G Sbjct: 206 YNRILA--DQTSSERSIRSSQVGTGGRSEKIRTYNYQ-QDRITDHRRGRTVHGVPEYLLG 262 Query: 342 D--LDDFMKATLAIKK 355 LD+ + + + + Sbjct: 263 SELLDEMVTSCVEGDQ 278 >gi|213581389|ref|ZP_03363215.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 197 Score = 143 bits (359), Expect = 6e-32, Method: Composition-based stats. Identities = 77/182 (42%), Positives = 113/182 (62%), Gaps = 6/182 (3%) Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 I G YG LK E G HR+ R+ +S R HTS ++ V P + ++ +I+ +D R Sbjct: 1 AKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLR 60 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 IDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E Sbjct: 61 IDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAET 120 Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 KR++ + + +G G + R+Y P V D R N+ + ++G LD Sbjct: 121 AKRQQ--AEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDML 177 Query: 347 MK 348 ++ Sbjct: 178 IE 179 >gi|302759769|ref|XP_002963307.1| hypothetical protein SELMODRAFT_405091 [Selaginella moellendorffii] gi|300168575|gb|EFJ35178.1| hypothetical protein SELMODRAFT_405091 [Selaginella moellendorffii] Length = 622 Score = 142 bits (357), Expect = 9e-32, Method: Composition-based stats. Identities = 97/332 (29%), Positives = 159/332 (47%), Gaps = 24/332 (7%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 + R + L+ +P + + + +E ++LD ++ IK ++ + + + L EL Sbjct: 53 SIEDRHACLSKALLEPGIAS--EKLIKMNKELRNLDYSVDMIKALRAKEKEVIGLKELVK 110 Query: 78 EEDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 E + ++ + ++ E + EADS LE + Sbjct: 111 ESVEDEEMRRLASGELQTATREVRDAQHDVLLELIPKDEADSRGYILEELEVTKRQFLRL 170 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ ++ E E + +G YG LK E GVHR+ R Sbjct: 171 ISSRCRHVFLVHVECLLDFYECSQEASAVISG----------DGVYGALKFESGVHRVQR 220 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + + R HTS +S+ + P + +++EI + +IDTYRA GAGGQHVNTT SAVR+ Sbjct: 221 VPVTEKAGRIHTSTASVAILP-EANEVDVEIRNDEIKIDTYRAGGAGGQHVNTTCSAVRV 279 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WG 309 TH PTG+VV Q ERSQHKNKA+A ++L A+LYELE + +A+ E + +IG Sbjct: 280 THAPTGIVVAIQDERSQHKNKAKALSILYARLYELERSR--AVASRSELRQDQIGSSDRS 337 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 +IR+Y P V D R + + + +++G Sbjct: 338 ERIRTYNF-PQGRVTDHRVGVTQHAIEQIMEG 368 >gi|300175228|emb|CBK20539.2| unnamed protein product [Blastocystis hominis] Length = 299 Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats. Identities = 89/268 (33%), Positives = 135/268 (50%), Gaps = 6/268 (2%) Query: 91 NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150 I L +L + D + +EV AGAGG E+ + ++ MY + + + Sbjct: 22 EANIISLPSNKYCCITLFTPREDHKNCTIEVRAGAGGAEACLFTEDIMNMYKNYCSLKDW 81 Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 K L + GIK A + I G ++G L+ E GVHR+ R+ +S R HTS ++ Sbjct: 82 KWSVLSCNAPTGGGIKEAIIKITGEGSFGVLRTESGVHRVQRVPETESQGRIHTSTMTVA 141 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 V P V++ + I SD RID +R+SG GGQHVN T+SAVRITH+PTG+VV Q ER+QH Sbjct: 142 VLPEVENMETL-IRPSDLRIDLFRSSGKGGQHVNKTESAVRITHLPTGIVVSNQDERNQH 200 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKT---EIGWGRQIRSYVLQPYQMVKDLR 327 NKA+A +L +L + E + S + + R+Y P + D R Sbjct: 201 MNKAKAMQILAIRLQNRQNSLFNEEIDSERRSYPFAFDWARCEKNRTYNY-PNSRITDHR 259 Query: 328 TNIEKTSPSDVLDGD-LDDFMKATLAIK 354 + +++G+ LD+F A + Sbjct: 260 IGLTLYGMDKMMNGELLDEFAVALKQWR 287 >gi|303287338|ref|XP_003062958.1| predicted protein [Micromonas pusilla CCMP1545] gi|226455594|gb|EEH52897.1| predicted protein [Micromonas pusilla CCMP1545] Length = 294 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 105/258 (40%), Positives = 146/258 (56%), Gaps = 11/258 (4%) Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 L S +AD A LE+ AGAGG E+ +A L RMY +A +R + E + +E G Sbjct: 34 LLLPSDDADDGGAILEIRAGAGGDEAARFAANLARMYDMFARRRGWTFERMTATTTDEGG 93 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN--SRRHTSFSSIWVYPVVDDSIEIE 222 K T + G + YG LK E GVHR VR S + HTS +S+ V P + +E++ Sbjct: 94 YKDVTFNVSGDDVYGTLKYESGVHRRVRRVQRVSGDEGKVHTSTASVAVMPH-AEEVELD 152 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 + + D RIDT RASGAGGQHVNTT+SAVR+TH+P+G VV ERSQHKNK +A+ +LRA Sbjct: 153 LRDEDVRIDTMRASGAGGQHVNTTNSAVRLTHVPSGTVVVMMDERSQHKNKEKAFKILRA 212 Query: 283 KLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 ++Y E + E + K+ IG G ++R+Y + VKD R N + +L Sbjct: 213 RIY--EGLRAEAHRERADQRKSLIGSGDRSERVRTYNYKD-GRVKDHRVNAQVNDLEGLL 269 Query: 340 DG--DLDDFMKATLAIKK 355 +G L D + A +K Sbjct: 270 NGGDALSDIVDALRTEEK 287 >gi|125984748|ref|XP_001356138.1| GA19071 [Drosophila pseudoobscura pseudoobscura] gi|54644457|gb|EAL33198.1| GA19071 [Drosophila pseudoobscura pseudoobscura] Length = 392 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 92/300 (30%), Positives = 146/300 (48%), Gaps = 8/300 (2%) Query: 48 ERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR----IKLEVEYKQ 103 L+ ++ +++ + + ++ E+D+ +N K E Q Sbjct: 58 RLSQLEGVVNALEQRRVLERNITSAKDIEQEKDEDMRKLMEEENEVYADLLSKQEQTMLQ 117 Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163 L+ + V+AGAGG E+ +A L MYT + E ++ E + Sbjct: 118 ELLALADDEVYPALIFGVNAGAGGQEAMLFAQELFEMYTSYFEHMGWEYEEFARETTDIG 177 Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 G++ A +++ G +A+ WL+ E GVHR+ R+ + R HTS SI V P + + I Sbjct: 178 GLRHANVMVNGADAFHWLRFEAGVHRVQRVPATEKAGRMHTSTVSITVIP-RPADVHVHI 236 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +E D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+ A L+A+ Sbjct: 237 AEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELALKRLQAR 296 Query: 284 LYELELQKREEIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDG 341 L + +L+ E ++ + + +IR+Y V D R + L G Sbjct: 297 LVQQQLESSEASKQATKKAQQGSLNRNEKIRTYNFV-QDRVTDHRIQGGTLHNLDGFLKG 355 >gi|297739884|emb|CBI30066.3| unnamed protein product [Vitis vinifera] Length = 414 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 89/343 (25%), Positives = 168/343 (48%), Gaps = 6/343 (1%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 + + A R+ +LW +V ++ ++ + + +K++ + + ++ Sbjct: 71 LELEEA-SRIRQ-EEMIRKYNLWDDVTKSNEILGKLADSSKVVDTLKDLTYKAEEAKLIT 128 Query: 74 ELALEED-DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 +L + + + ++ + + + + LL G+ D A L + AG G S+ Sbjct: 129 QLVEMDAINHGLFEQAYNASVDVSKFLYQYEMSKLLRGQFDMEGACLTIKAGPRGIYSEI 188 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA LL MYT+WAEK+ +K +E + + GIKSAT+ + YG+L GE+GVH ++R Sbjct: 189 WAEQLLSMYTKWAEKQGYKGRVVEKYASKNGGIKSATIEFESEYGYGYLSGERGVHHMIR 248 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 S +S S + ++ + +++I + D RI + G T AV I Sbjct: 249 SSDDESILHETGSAVVDVIPLFLETAPDLQIDDGDLRI---SSPSCHGVEQGRTGHAVCI 305 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 HIPTG+ VQ ERS NK +A N L+AKL +++ + W ++ Sbjct: 306 QHIPTGISVQSSGERSHFANKMRALNRLKAKLVVTAMEQGIPEVGGIKREAIADMWKQET 365 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R YV P ++V+D++T+I+ + VLDG+++ + A +++++ Sbjct: 366 RRYVFHPNKLVQDVKTDIQLPDLNSVLDGNIEPLIGANISMRQ 408 >gi|225441347|ref|XP_002274658.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 417 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 89/343 (25%), Positives = 168/343 (48%), Gaps = 6/343 (1%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 + + A R+ +LW +V ++ ++ + + +K++ + + ++ Sbjct: 74 LELEEA-SRIRQ-EEMIRKYNLWDDVTKSNEILGKLADSSKVVDTLKDLTYKAEEAKLIT 131 Query: 74 ELALEED-DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 +L + + + ++ + + + + LL G+ D A L + AG G S+ Sbjct: 132 QLVEMDAINHGLFEQAYNASVDVSKFLYQYEMSKLLRGQFDMEGACLTIKAGPRGIYSEI 191 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA LL MYT+WAEK+ +K +E + + GIKSAT+ + YG+L GE+GVH ++R Sbjct: 192 WAEQLLSMYTKWAEKQGYKGRVVEKYASKNGGIKSATIEFESEYGYGYLSGERGVHHMIR 251 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 S +S S + ++ + +++I + D RI + G T AV I Sbjct: 252 SSDDESILHETGSAVVDVIPLFLETAPDLQIDDGDLRI---SSPSCHGVEQGRTGHAVCI 308 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312 HIPTG+ VQ ERS NK +A N L+AKL +++ + W ++ Sbjct: 309 QHIPTGISVQSSGERSHFANKMRALNRLKAKLVVTAMEQGIPEVGGIKREAIADMWKQET 368 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 R YV P ++V+D++T+I+ + VLDG+++ + A +++++ Sbjct: 369 RRYVFHPNKLVQDVKTDIQLPDLNSVLDGNIEPLIGANISMRQ 411 >gi|296203802|ref|XP_002749048.1| PREDICTED: peptide chain release factor 1, mitochondrial [Callithrix jacchus] Length = 488 Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats. Identities = 101/393 (25%), Positives = 162/393 (41%), Gaps = 63/393 (16%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 +N + L + H N + + L R + L + +EIQ+ L + Sbjct: 81 ENLHKESQTLEQCLQ--HFSVNEEKRRSLNRRQAELAPLAAVYQEIQEAEQAIEELESMC 138 Query: 77 LEEDDCSILQETSD------------------------------NLQRIKLEVEYKQFES 106 ++ ++ + +++ E Sbjct: 139 KSRQGSALWPRLECSGAVITDCSLNLPGSSDPPASASQVAGTTGLNKQDEKQLQELALEE 198 Query: 107 L-------------------LSGEADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWA 145 + D ND LEV +G GG Q + + MY ++ Sbjct: 199 RQTLVQKINMLYSELFQSLVPKEKYDKNDVILEVTSGKTTGGDICQQFTREIFDMYQNYS 258 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH-- 203 + ++ E L + G+ A I G + Y LK E G+HR+ RI +SR Sbjct: 259 CYKHWQFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQRI 318 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 + + + D +++++ D RIDT+RA GAGGQHVNTTDSAVR+ HIPTG+VV+C Sbjct: 319 HTGTMSVIILPQPDEVDVKLDPKDLRIDTFRARGAGGQHVNTTDSAVRLVHIPTGLVVEC 378 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320 QQERSQ +NK A ++LRA+LY+ ++K + K ++G G +IR+Y Sbjct: 379 QQERSQIRNKEIALSVLRARLYQQIIEKN--KCQQHSTRKLQVGTGAQSERIRTYNF-TQ 435 Query: 321 QMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351 V D R E + + G LD ++ L Sbjct: 436 DRVTDHRIAYEVRDIKEFVCGGKALDQLIQRLL 468 >gi|189191194|ref|XP_001931936.1| peptide chain release factor 1 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187973542|gb|EDU41041.1| peptide chain release factor 1 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 321 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 90/268 (33%), Positives = 135/268 (50%), Gaps = 22/268 (8%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE---ALEIHDGEEA 163 + LE+ GAGG+E+ +A L RMY + + F+T I+ EA Sbjct: 38 VPVHPFAHLPCLLEIRPGAGGSEAAIFAGDLFRMYMAFCNRNGFRTNLLKYENINGTTEA 97 Query: 164 GI--KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-------- 213 G+ A + ++ NAYG + E GVHR+ R+ ++ R HTS +S+ V P Sbjct: 98 GVPLSEAIMEVENENAYGVFRCEAGVHRVQRVPATETKGRTHTSAASVHVLPSLQENSAE 157 Query: 214 ---VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + + I + +++ RASGAGGQHVN T+SAVR+TH+PT VV Q RSQH Sbjct: 158 EQDFDNPESDYYIDPKEVKLEVMRASGAGGQHVNKTESAVRLTHMPTNTVVAMQDSRSQH 217 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESS---KTEIGWGRQIRSYVLQPYQMVKDLR 327 KNK +AW +LRA++ + +KREE S +G G ++R+Y Q V D R Sbjct: 218 KNKEKAWALLRARIAQTRREKREEEMANMRRSVIGVARMGRGDKVRTYNWG-QQRVTDHR 276 Query: 328 TNIEKTSPSDVLDGD--LDDFMKATLAI 353 + DV+ G L+ M++ + Sbjct: 277 SGTTVHDLDDVMGGGQTLEKVMESVRSW 304 >gi|195472530|ref|XP_002088553.1| GE18626 [Drosophila yakuba] gi|194174654|gb|EDW88265.1| GE18626 [Drosophila yakuba] Length = 392 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 93/316 (29%), Positives = 153/316 (48%), Gaps = 10/316 (3%) Query: 48 ERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI----KLEVEYKQ 103 L+ +S +++ + ++ E+D+ +N + K + Q Sbjct: 58 RLAQLEGVVSALEQRRVLERHITSAKDMEAEKDEDMRELMREENEVYVDLLGKQDQALLQ 117 Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163 LS + ++AGAGG E+ +A L MYT + + + E + Sbjct: 118 ELLTLSDDEQYPALIFGLNAGAGGQEAMLFAQELYEMYTGYFDHMGWNWEEFAGESTDIG 177 Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 G++ A+L++ G +A+ WL+ E GVHR+ R+ + + R HTS +SI V P I++ I Sbjct: 178 GLRHASLMVSGEDAFRWLRFEAGVHRVQRVPATEKSGRMHTSTASITVIP-RPADIQVHI 236 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +E D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+ A LR++ Sbjct: 237 AEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMKRLRSR 296 Query: 284 LYELELQKREEIA-NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDG 341 L + +L+ E ++ + + +IR+Y + D R + L G Sbjct: 297 LVQQQLESVEANKMATKKAQQGSLNRNEKIRTYNFV-QDRITDHRIQGGTLHNLDGFLKG 355 Query: 342 --DLDDFMKATLAIKK 355 L ++ + Sbjct: 356 GDQLSGLIEKLQMEHR 371 >gi|213162329|ref|ZP_03348039.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 194 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 129/193 (66%), Positives = 154/193 (79%) Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 D YL++ AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E +GE AGIKSAT+ I G Sbjct: 2 DCYLDIQAGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGE 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 AYGWL+ E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+I+I+ +D RID YRA Sbjct: 62 YAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRA 121 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SGAGGQHVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ Sbjct: 122 SGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAE 181 Query: 296 ANIGESSKTEIGW 308 E +K++IGW Sbjct: 182 KQAMEDTKSDIGW 194 >gi|19921226|ref|NP_609617.1| CG5705 [Drosophila melanogaster] gi|7298021|gb|AAF53262.1| CG5705 [Drosophila melanogaster] gi|16769148|gb|AAL28793.1| LD18447p [Drosophila melanogaster] gi|220943136|gb|ACL84111.1| CG5705-PA [synthetic construct] gi|220953196|gb|ACL89141.1| CG5705-PA [synthetic construct] Length = 392 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 94/311 (30%), Positives = 155/311 (49%), Gaps = 10/311 (3%) Query: 48 ERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI----KLEVEYKQ 103 L+ +S +++ + ++ E+D+ +N + K + Q Sbjct: 58 RLAQLEGVVSALEQRRVLERHITSAKDMEAEKDEDMRELMREENEVYVDLLGKQDQALLQ 117 Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163 LS + + ++AGAGG E+ +A L MYT + E ++ E + Sbjct: 118 ELLTLSDDEEYPALIFGLNAGAGGQEAMLFAQELYEMYTGYFEHMGWEWEEFASEGTDIG 177 Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 G++ A+L++ G +A+ WL+ E GVHR+ R+ + + R HTS +SI V P I++ I Sbjct: 178 GLRHASLMVSGEDAFRWLRYEAGVHRVQRVPATEKSGRMHTSTASITVIP-RPADIQVHI 236 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +E D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+ A LR++ Sbjct: 237 AEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMKRLRSR 296 Query: 284 LYELELQKREE-IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDG 341 L + +L+ E ++ + + +IR+Y + D R + + L G Sbjct: 297 LVQQQLESVEASKMATKKAQQGSLNRNEKIRTYNFV-QDRITDHRIQGGTLHNLNGFLKG 355 Query: 342 --DLDDFMKAT 350 L ++ Sbjct: 356 GDQLSGLIEKL 366 >gi|323337560|gb|EGA78805.1| Mrf1p [Saccharomyces cerevisiae Vin13] gi|323348703|gb|EGA82945.1| Mrf1p [Saccharomyces cerevisiae Lalvin QA23] Length = 303 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 96/255 (37%), Positives = 136/255 (53%), Gaps = 11/255 (4%) Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA- 163 + L + LE+ G GG E+ + LL MY +A RK+K + ++ E Sbjct: 33 KLLPPHPFADKPSLLELRPGVGGIEAMIFTQNLLDMYIGYANYRKWKYRIISKNENESGS 92 Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI---- 219 GI A L I+ +Y L+ E GVHR+ RI ++ R HTS +++ V P + D Sbjct: 93 GIIDAILSIEEAGSYDRLRFEAGVHRVQRIPSTETKGRTHTSTAAVVVLPQIGDESAKSI 152 Query: 220 ---EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 E + R+D RASG GGQHVNTTDSAVR+THIP+G+VV Q ERSQHKNKA+A Sbjct: 153 DAYERTFKPGEIRVDIMRASGKGGQHVNTTDSAVRLTHIPSGIVVSMQDERSQHKNKAKA 212 Query: 277 WNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 + +LRA+L E E ++EE S+ + +IR+Y P + D R Sbjct: 213 FTILRARLAEKERLEKEEKERKARKSQVSSTNRSDKIRTYNF-PQNRITDHRCGFTLLDL 271 Query: 336 SDVLDGD-LDDFMKA 349 VL G+ LD+ ++A Sbjct: 272 PGVLSGERLDEVIEA 286 >gi|255641350|gb|ACU20952.1| unknown [Glycine max] Length = 230 Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats. Identities = 75/221 (33%), Positives = 131/221 (59%), Gaps = 12/221 (5%) Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY R++E+ +K + E+ G K+ + IKG Y LK E GVHR+ R+ ++ Sbjct: 1 MYERYSERNSWKYSLVSSSAAEKGGYKTYVMEIKGNRVYSKLKYESGVHRVQRVPLTETQ 60 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS +++ + P D +E+ I D + T R+ GAGGQ+VN ++A+ + H PTG+ Sbjct: 61 GRVHTSTATVAIMP-EADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGI 119 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316 + C +ER+Q KN+ +A+ +LRAKLYE+++++++E ++ K ++G G +IR+Y Sbjct: 120 RIFCTEERTQLKNRNRAFQLLRAKLYEIKVREQQE--SLRNQRKLQVGTGARSEKIRTYN 177 Query: 317 LQPYQMVKDLR--TNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + V D R N E T LDGD++D +++ + +++ Sbjct: 178 YKD-NRVTDHRLKINYELT---SFLDGDIEDAVQSCVTMEQ 214 >gi|114651377|ref|XP_001150094.1| PREDICTED: mitochondrial translational release factor 1 isoform 2 [Pan troglodytes] Length = 487 Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 101/393 (25%), Positives = 158/393 (40%), Gaps = 63/393 (16%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 +N + L + + N + L R L + +EIQ+ L + Sbjct: 80 ENLSKEYQTLEQCLQHIPV--NEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMC 137 Query: 77 LEEDDCSILQETSD------------------------------NLQRIKLEVEYKQFES 106 ++ ++ + +++ E Sbjct: 138 KSRQSLALWPRLECSNVITAHFNLELLDSSSPPTSASQVAGTTGLNKQDEKQLQELALEE 197 Query: 107 L-------------------LSGEADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWA 145 + D ND LEV AG GG Q + + MY ++ Sbjct: 198 RQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYS 257 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH-- 203 + ++ E L + G+ A I G Y LK E G+HR+ RI +SR Sbjct: 258 CYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGIHRVQRIPEVGLSSRMQRI 317 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 + + + D +++++ D RIDT+RA GAGGQHVN TDSAVR+ HIPTG+VV+C Sbjct: 318 HTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVEC 377 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW---GRQIRSYVLQPY 320 QQERSQ KNK A+ +LRA+LY+ ++K + + K ++G +IR+Y Sbjct: 378 QQERSQIKNKEIAFRVLRARLYQQIIEK--DKRQQQSARKLQVGTRAQSERIRTYNF-TQ 434 Query: 321 QMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351 V D R E + L G LD ++ L Sbjct: 435 DRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLL 467 >gi|255017364|ref|ZP_05289490.1| peptide chain release factor 2 [Listeria monocytogenes FSL F2-515] Length = 231 Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 113/231 (48%), Positives = 150/231 (64%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 R++ L + DP+ W + A+ ++ E +++ I LEL E Sbjct: 1 MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E D + +E +++ + + + +LS D N+A LE+H GAGGTESQDW +MLL Sbjct: 61 EADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLL 120 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMY RW+EK+ FK E L+ G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS Sbjct: 121 RMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDS 180 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + RRHTSF S+ V P +DD IEIE+ D +IDTYRA+GAGGQH+NTTDSA Sbjct: 181 SGRRHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSA 231 >gi|119629057|gb|EAX08652.1| mitochondrial translational release factor 1, isoform CRA_c [Homo sapiens] Length = 487 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 101/393 (25%), Positives = 158/393 (40%), Gaps = 63/393 (16%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 +N + L + + N + L R L + +EIQ+ L + Sbjct: 80 ENLSKEYQTLEQCLQHIPV--NEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMC 137 Query: 77 LEEDDCSILQETSD------------------------------NLQRIKLEVEYKQFES 106 ++ ++ + +++ E Sbjct: 138 KSRQSLALWPRLECSSVIIAHFNLELLDSSNPPTSASQVAGTTGLNKQDEKQLQELALEE 197 Query: 107 L-------------------LSGEADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWA 145 + D ND LEV AG GG Q + + MY ++ Sbjct: 198 RQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYS 257 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH-- 203 + ++ E L + G+ A I G Y LK E G+HR+ RI +SR Sbjct: 258 CYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGIHRVQRIPEVGLSSRMQRI 317 Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 + + + D +++++ D RIDT+RA GAGGQHVN TDSAVR+ HIPTG+VV+C Sbjct: 318 HTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVEC 377 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW---GRQIRSYVLQPY 320 QQERSQ KNK A+ +LRA+LY+ ++K + + K ++G +IR+Y Sbjct: 378 QQERSQIKNKEIAFRVLRARLYQQIIEK--DKRQQQSARKLQVGTRAQSERIRTYNF-TQ 434 Query: 321 QMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351 V D R E + L G LD ++ L Sbjct: 435 DRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLL 467 >gi|331242267|ref|XP_003333780.1| peptide chain release factor 1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309312770|gb|EFP89361.1| peptide chain release factor 1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 416 Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats. Identities = 92/318 (28%), Positives = 162/318 (50%), Gaps = 23/318 (7%) Query: 44 MLMRERQHLDNA---ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE 100 ++++++ + + E+ C+ + E +ED I ++ L Sbjct: 69 EIIKKQKAIQPLKLAVEKYDELSSLACELKTISEKDPDEDMREIAITELKTIEERALRTI 128 Query: 101 YKQFE-----SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + + + E+ A +E+ G GG E+ +A +L+ +YTR A ++++ + + Sbjct: 129 EQVKQGLIQVASPRPESYDQSALVEIKPGVGGVEASHFATLLMNLYTRLATRKRWHIKPV 188 Query: 156 EIHDGEEA----GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 + G++ A L I+G YG L+ E GVHR+ R+ + + HTS +S+ V Sbjct: 189 SVEYMTSGQGQDGLREAVLEIEGQAVYGSLRWEAGVHRVQRVPVMQNTASIHTSTASVIV 248 Query: 212 YPVVD-----DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 P+ + E E D +++T R+ GAGGQHVN T+SAVR+THIPTG VV Q Sbjct: 249 LPLNPSGSEENESEDLFDEKDIKLETMRSQGAGGQHVNKTESAVRLTHIPTGTVVSMQDS 308 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMV 323 RSQH+N+ +A+ +LRA+L +L+L R+++ ES +++ +IR+Y Q V Sbjct: 309 RSQHQNRERAYMILRARLLDLKL--RQKVIENRESRLSQVKNTNRSEKIRTYNFQ-QGRV 365 Query: 324 KDLRTNIEKTSPSDVLDG 341 D R + +D++DG Sbjct: 366 TDHRIGLTLPRLNDIIDG 383 >gi|194860855|ref|XP_001969666.1| GG23822 [Drosophila erecta] gi|190661533|gb|EDV58725.1| GG23822 [Drosophila erecta] Length = 392 Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats. Identities = 94/311 (30%), Positives = 152/311 (48%), Gaps = 10/311 (3%) Query: 48 ERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI----KLEVEYKQ 103 L+ +S +++ + ++ E+D+ +N + K + Q Sbjct: 58 RLAQLEGVVSALEQRRVLERQITSAKDMEAEKDEDMRELMREENEVYVDLLGKQDQALLQ 117 Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163 LS + ++AGAGG E+ +A L MYT + E ++ E + Sbjct: 118 ELLTLSDDEMYPALIFGLNAGAGGQEAMLFAQELYEMYTGFFEHMGWEWEEFASEITDIG 177 Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 G++ A+L++ G +A+ WL+ E GVHR+ R+ + + R HTS +SI V P I + I Sbjct: 178 GLRHASLMVSGEDAFRWLRHEAGVHRVQRVPATEKSGRMHTSTASITVIP-RPADIHVHI 236 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +E D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+ A LR++ Sbjct: 237 AEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMKRLRSR 296 Query: 284 LYELELQKREE-IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDG 341 L + +L+ E ++ + + +IR+Y + D R + L G Sbjct: 297 LVQQQLESAEASKMATKKAQQGSLNRNEKIRTYNFV-QDRITDHRIQGGTMHNLDGFLKG 355 Query: 342 --DLDDFMKAT 350 L ++ Sbjct: 356 GDQLCGLIEKL 366 >gi|301347896|ref|ZP_07228637.1| peptide chain release factor 1 [Acinetobacter baumannii AB056] gi|301513180|ref|ZP_07238417.1| peptide chain release factor 1 [Acinetobacter baumannii AB058] gi|301597157|ref|ZP_07242165.1| peptide chain release factor 1 [Acinetobacter baumannii AB059] Length = 239 Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats. Identities = 70/231 (30%), Positives = 107/231 (46%), Gaps = 1/231 (0%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + L RE L + + D + Sbjct: 9 LDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLTEITEVWGKYRQAEEDIETAEMM 68 Query: 76 ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + +E + + + + DSN AYLE+ AG GG E+ ++ Sbjct: 69 KSDPDFKDMAEEEIQANKVLLEELESQLNILMIPKDPNDSNAAYLEIRAGTGGDEAAIFS 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+++AE + ++ E L ++GE G K + G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSKYAESQGWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLKFESGAHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 +S R HTS ++ + P +D +EI+ +D RIDTYRASGAGGQH+N Sbjct: 189 ATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQHINK 239 >gi|194761148|ref|XP_001962794.1| GF14253 [Drosophila ananassae] gi|190616491|gb|EDV32015.1| GF14253 [Drosophila ananassae] Length = 392 Score = 139 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 90/311 (28%), Positives = 156/311 (50%), Gaps = 10/311 (3%) Query: 48 ERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107 L+ ++ +++ + + ++ LE+D+ +N L + +Q Sbjct: 58 RLAQLEGVVTALEQRRVLERNITSAQDMELEKDEDMRSLMQEENAIYTDLLSKQEQTLLR 117 Query: 108 ----LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163 ++ + ++AGAGG E+ +A L MYT + E + + E + Sbjct: 118 ELLAMADDEVYPALIFGINAGAGGQEAMLFAQELYEMYTNYFEHKGWDYEEFAHETTDIG 177 Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 GI+ A++++ G +A+ WL+ E GVHR+ R+ + + R HTS +SI V P +++ I Sbjct: 178 GIRHASIMVSGEDAFTWLRHEAGVHRVQRVPATEKSGRMHTSTASITVIP-RPADVQVHI 236 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 ++ D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+ A + LR++ Sbjct: 237 ADKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMSRLRSR 296 Query: 284 LYELELQKREEIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDG 341 L + +L+ E ++ + + +IR+Y + D R + L G Sbjct: 297 LVQRQLESAEASTKATKKAQQGSLNRNEKIRTYNFV-QDRITDHRLQGGTMHNLDGFLKG 355 Query: 342 --DLDDFMKAT 350 L ++ Sbjct: 356 GEQLTSLIEKL 366 >gi|195435374|ref|XP_002065668.1| GK14545 [Drosophila willistoni] gi|194161753|gb|EDW76654.1| GK14545 [Drosophila willistoni] Length = 397 Score = 139 bits (349), Expect = 8e-31, Method: Composition-based stats. Identities = 97/317 (30%), Positives = 154/317 (48%), Gaps = 11/317 (3%) Query: 48 ERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI----KLEVEYKQ 103 L+ ++ +++ + + +L E+D+ +N K E Q Sbjct: 60 RLSQLEGVVNALEQRRVLERNLTSQKDLEQEKDEDMRQLMEEENQVYTDLLAKQEQTMLQ 119 Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163 L+ + V++GAGG E+ +A L MYT + E + E + Sbjct: 120 ELLTLADDEVYPSLLFGVNSGAGGQEAMLFAQELYEMYTSYFEHMDWDYEEFARETTDIG 179 Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 G++ A +LI +AY WL+ E GVHR+ R+ + + R HTS +SI V P +++ Sbjct: 180 GLRHANILINDQDAYNWLRYEAGVHRVQRVPATEKSGRIHTSTASITVIP-KPADVQVHT 238 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +E D RI+T RASGAGGQHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+ A L+A+ Sbjct: 239 AEKDLRIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNREVALKRLQAR 298 Query: 284 LYELELQKREE-IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDG 341 L + +L+ E ++ + + +IR+Y + D R N + + L G Sbjct: 299 LVQQQLESSEATHLATKKAQQGSLNRNEKIRTYNFV-QDRITDHRIQNGTLHNLNGFLQG 357 Query: 342 --DLDDFMKAT-LAIKK 355 L ++ L +K Sbjct: 358 GEQLSGLIEKLQLEQRK 374 >gi|258566533|ref|XP_002584011.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237907712|gb|EEP82113.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 412 Score = 139 bits (349), Expect = 9e-31, Method: Composition-based stats. Identities = 92/326 (28%), Positives = 144/326 (44%), Gaps = 28/326 (8%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK-----L 97 + L A+ +KE L L + L+E Sbjct: 44 TETAKRVGELTLAVQALKEWDKAQETIAELNVLREDSSTDHELRELVSEDLETAVSSLPT 103 Query: 98 EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157 + + +E+ GAGG E+ +A+ LLRMY +R F+T L+ Sbjct: 104 LSNKLKESLVPRHPFAEFPCLVEIRPGAGGAEASLFASELLRMYLAVCSRRGFRTTILKK 163 Query: 158 HDGEEAGI-------KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 + G A + I+ P +Y + E GVHR+ RI ++ R HTS S+ Sbjct: 164 DTEDGYGSGGSEDLLSEAVVEIETPRSYDIFRTEAGVHRVQRIPATEAKGRVHTSAVSVM 223 Query: 211 VYP-----------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 + P D + + I+ + + + RASGAGGQHVN T+SAVR+THIPTG Sbjct: 224 ILPSFPEQNDGALNFDDPNSDYYINPQEVQSEKMRASGAGGQHVNKTESAVRLTHIPTGT 283 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRSY 315 VV Q RSQH+N+ +AW +LR+K+ ++ + RE+ ++G G ++R+Y Sbjct: 284 VVAVQDTRSQHENRRKAWRLLRSKIAQMRREAREQQLVELRRGIMGGVAKMGRGDKVRTY 343 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDG 341 D R+ + + SDVL+G Sbjct: 344 NFG-QNRCTDHRSGMTIHNLSDVLEG 368 >gi|212545056|ref|XP_002152682.1| mitochondrial translation release factor (RF-1), putative [Penicillium marneffei ATCC 18224] gi|210065651|gb|EEA19745.1| mitochondrial translation release factor (RF-1), putative [Penicillium marneffei ATCC 18224] Length = 421 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 92/338 (27%), Positives = 149/338 (44%), Gaps = 28/338 (8%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN---LQRIKLEV 99 + + L +K+ L L + + S L+ + + +L + Sbjct: 67 TKVAKRLGELAPVAQAVKDWDKTHETITELNSLISDPETDSELRSLALEDLDQTQTQLPI 126 Query: 100 EYKQFESLLSGEADSN--DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157 + +S L LE+ GAGG E+ +A LLRMY + ++ +T ++ Sbjct: 127 VSDKLKSALIPRHPFAALPCLLEIRPGAGGDEAGLFAYELLRMYQNFCSRKGLRTSIVKQ 186 Query: 158 HDGEEAGIKS---ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 E A + I+ P +Y L+ E GVHR+ R+ ++ R HTS S+ + P Sbjct: 187 DMEEAISNDRLSEAVVEIETPGSYDILRTEIGVHRVQRVPATEAKGRTHTSAVSVMILPN 246 Query: 215 VD-------------DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 + + ++ + + + RASGAGGQHVN T+SA+R+THIPTG+ V Sbjct: 247 FPESGANEENLNFEDPNSDYYVNPQEVKSEKMRASGAGGQHVNKTESAIRLTHIPTGLTV 306 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKRE----EIANIGESSKTEIGWGRQIRSYVL 317 Q RSQH N+ +AW +LRAKL E + RE ++ ++G G ++R+Y Sbjct: 307 SMQDSRSQHANRKKAWQLLRAKLAERRREAREEEMVKLRRGAMGGVAKMGRGDKVRTYNF 366 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353 D R+ I VLDG L+ M + Sbjct: 367 S-QSRCTDHRSGITVHDLDSVLDGGHGLETVMDSVRTW 403 >gi|149050029|gb|EDM02353.1| rCG37077, isoform CRA_a [Rattus norvegicus] Length = 436 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 83/351 (23%), Positives = 141/351 (40%), Gaps = 31/351 (8%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 + L+ +D + ++ + + R L ++ +EIQ+ L + Sbjct: 81 EGLNDEYQSLDQCLQD--ISEDEGDRRASHRRHAELAPLVAVYQEIQEAEQAIEELESMC 138 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG---------AGG 127 + Q + ++ + E + GG Sbjct: 139 KSLNKQDEKQLQELVSEERQIIDQKIHRLYSELLEHLVPKEKCDRSNVILEVTSGRTTGG 198 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 Q + + MY ++ + ++ E L + G+ A I G + Y LK E G+ Sbjct: 199 DICQQFTREIFDMYQNYSYYKHWRFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 258 Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 HR+ RI +SR + + + D +++++ D R+DT+RA GAGGQHVNT Sbjct: 259 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKVDPRDLRVDTFRARGAGGQHVNT 318 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TD V V+CQQERSQ KNK A +LRA+LY+ ++K + + K + Sbjct: 319 TDRLV----------VECQQERSQLKNKEIALRVLRARLYQQIIEK--DKCQQQNARKLQ 366 Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351 +G +IR+Y V D R E + L G+ LD ++ L Sbjct: 367 VGTRAQSERIRTYNF-TQDRVTDHRIAYEVRDIKEFLRGEKCLDQLIERLL 416 >gi|320592214|gb|EFX04653.1| mitochondrial translation release factor [Grosmannia clavigera kw1407] Length = 437 Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats. Identities = 94/344 (27%), Positives = 159/344 (46%), Gaps = 31/344 (9%) Query: 42 AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101 A E Q + A++ +E Q + + E+++ L + +L+ Sbjct: 66 AAKRAGEIQGVAQALAEWEEAQRTAEELRTMASAQEEDEELRKLAKDELEATEARLDGVA 125 Query: 102 KQFESLLSGEADS--NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159 +Q + L+ + LE G GG E + + + L MY + ++ ++ ++ Sbjct: 126 QQLTTTLTPKHPFGEMPCLLEFRPGPGGLEGRFFTDSLFHMYQSYCTRQGYRARVIKYEV 185 Query: 160 GEEAGI---------KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 + G + A L ++ AY +GE G+HR+ RI + N R HTS +++W Sbjct: 186 SDSLGETGADGESALQEAVLEVQEAGAYDVFRGEAGIHRVQRIPATEKNGRTHTSAAAVW 245 Query: 211 VYP--------------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 V P D + + +D R++T RA GAGGQHVN T+SA+R+TH+P Sbjct: 246 VLPSFPDSSGEGDSANDYDDPESDFYVQPADVRVETMRARGAGGQHVNKTESAIRLTHVP 305 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES---SKTEIGWGRQIR 313 +G VV Q RSQH+N+ AW +LRA++ + ++REE A SK ++ +IR Sbjct: 306 SGTVVSMQDSRSQHQNRDSAWKILRARIAQRRREQREEEARRLRDAVLSKAQVTRSDKIR 365 Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATLAIKK 355 +Y V D R ++ + DVL G L + A A ++ Sbjct: 366 TYNYS-QDRVTDHRCGLDVHNLPDVLAGGDTLARIVSAVCAWQR 408 >gi|167517235|ref|XP_001742958.1| hypothetical protein [Monosiga brevicollis MX1] gi|163778057|gb|EDQ91672.1| predicted protein [Monosiga brevicollis MX1] Length = 416 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 105/362 (29%), Positives = 172/362 (47%), Gaps = 41/362 (11%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 +RL+ L T+ P+ E + R + I L L ++ Sbjct: 33 LSERLTQLTTENGAPN------EIASISRRLAKVAALTEVIHARDKALEAIAELQDMLKT 86 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQDWA 134 E+D + + + +L + + +++ + E + AD A +E+ AG GG E+ +A Sbjct: 87 EEDSELRELAASDLAQEQTQLQELEQELLQALVPEDTADEASAVVELRAGTGGREAALFA 146 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 + L MY A+++++ + L+ ++ G++ A+L I G +G LK E GVHR+ RI Sbjct: 147 HDLKLMYQGLAQQQRWSFKVLDEQATDDGGLREASLSISGSGVFGMLKFESGVHRVQRIP 206 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 ++ R HTS +++ V P +E+E+ + D ++TYRA GAGGQHVNTTDSAVR+TH Sbjct: 207 TTETAGRIHTSTATVAVLP-EPTDVEVEVLDKDIHVETYRAGGAGGQHVNTTDSAVRLTH 265 Query: 255 IPTGVVVQCQQERSQH-------------------------KNKAQAWNMLRAKLYELEL 289 +PTG VV CQ ERSQH +NKA A +L+A+++ Sbjct: 266 LPTGTVVACQTERSQHKLEHIVSTRVAIDQCVLFNRVHHLVQNKAAAMKVLKARIFAQVR 325 Query: 290 QKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDD 345 K+EE + +IR+Y + P V D R + +L G L + Sbjct: 326 AKQEEERRAARREQISTTPGERSDRIRTYNM-PQDRVTDHRIKASLNNVETLLKGISLPE 384 Query: 346 FM 347 + Sbjct: 385 LI 386 >gi|84996385|ref|XP_952914.1| peptide chain release factor [Theileria annulata strain Ankara] gi|65303911|emb|CAI76290.1| peptide chain release factor, putative [Theileria annulata] Length = 364 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 91/286 (31%), Positives = 140/286 (48%), Gaps = 39/286 (13%) Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK-----------FKTE 153 E + D N L + +G GG+ES DW +L MY ++ + + + Sbjct: 75 ELDPLRKYDRNSCKLIIKSGVGGSESFDWCRILTEMYKKFISHYEPPDSDDNFPSSLRLK 134 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 +++ G G + + G AY LKGE G HRL+R SP++S ++R TSF S+ V P Sbjct: 135 EVDVCPGSTGGFRRVEFDVIGDYAYRLLKGENGTHRLIRNSPFNSENKRQTSFGSVQVVP 194 Query: 214 VVDDSI--------EIEISESDCRIDTYRASGAGGQHVNTTDSA---------------- 249 ++ D+ ++ + D I++ R+SG GGQ+VN ++A Sbjct: 195 ILSDTDEEVVNFKKNRQLLKKDLIIESMRSSGKGGQNVNKVETAGNLLFLKSIFTKSTID 254 Query: 250 ----VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 VR+ H PTG+ V+ QQER+ +N+ A ML + + L+K E N + Sbjct: 255 IFVLVRVYHKPTGLSVKVQQERTNTQNREIAIRMLTKLVDQHYLKKLNEKVNEIKGEDLV 314 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 WG IR+Y L P Q VKD RTN E + ++VL+GDL F+ L Sbjct: 315 GTWGSHIRTYTLNPEQRVKDHRTNFETSKATNVLNGDLLPFILTYL 360 >gi|224086914|ref|XP_002308002.1| predicted protein [Populus trichocarpa] gi|222853978|gb|EEE91525.1| predicted protein [Populus trichocarpa] Length = 374 Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 85/342 (24%), Positives = 166/342 (48%), Gaps = 8/342 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++ R + +LW++ ++ ++ + AI +K+++ + + ++ +L Sbjct: 35 LEHEEARRIKQEEMIHECNLWEDPAKSNEILIKLAGSAKAIDALKDLKYKAEEAKLISQL 94 Query: 76 ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 E ++ ++ ++ + LL G D A + + AG+ G + W Sbjct: 95 VEMEAINYQLFKQAYTASLDVRKLLDQYEMSRLLKGPYDKQGACVVIRAGSKGLNHEIWK 154 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 LL MY +WAEK +K +E H GI+SAT+ + AYG+L GE+G+H +I+ Sbjct: 155 EELLNMYVKWAEKLGYKGRLVEKHTSMHGGIESATIEFEFECAYGYLSGERGIHH--KIN 212 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 + + + + + V P+ + + + I + S + T + V + H Sbjct: 213 SQNGSVHHEVTTACVDVVPLFLGTGFDFQIDDEELIVSCSPSLLRDRKSRT-ELTVCLQH 271 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI--GWGRQI 312 IPTG+ VQ ERS NK +A N L+AKL + +++ + ++ + +I W ++ Sbjct: 272 IPTGISVQSSGERSHFANKVKAHNRLKAKLLVIAEEQK--VCDVSSIRRADIVDEWQKET 329 Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 R YV QPY++V+D+RT IE + +LDG+++ + A + I+ Sbjct: 330 RRYVSQPYKLVQDVRTGIELPDLNSILDGNINTLIGAHINIR 371 >gi|260792424|ref|XP_002591215.1| hypothetical protein BRAFLDRAFT_62179 [Branchiostoma floridae] gi|229276418|gb|EEN47226.1| hypothetical protein BRAFLDRAFT_62179 [Branchiostoma floridae] Length = 353 Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 95/315 (30%), Positives = 158/315 (50%), Gaps = 12/315 (3%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET------SDNLQRIK 96 + L++ + L + + +++++ + + + +L +D +K Sbjct: 15 RRLVQRWEELRHIVEKVQQVETTQKELVEVEKLLSGLEDGETEMRDLALQEKEAYENDMK 74 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 + + + EAD ND LEV AG GG E+ + + + MY ++A + + + L Sbjct: 75 HLEDEILTLLVPADEADENDIILEVVAGVGGQEAMLFTSDMFEMYCQYAAYKNWHMQVLT 134 Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 + G++ AT IKG NAY LK E GVHR+ R+ + R HTS ++ V P Sbjct: 135 MDTSTLGGLRHATASIKGLNAYKLLKLEAGVHRVQRVPKTEKAGRVHTSTMTVAVLPQ-P 193 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT-GVVVQCQQERSQHKNKAQ 275 I+ +S+ +I+T +ASGAGGQHVN T+SAVRI HIPT V+CQQERSQ +N+A Sbjct: 194 KEIDNTWDKSEFKIETKKASGAGGQHVNKTESAVRIVHIPTGENAVECQQERSQLRNRAI 253 Query: 276 AWNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A ++A+LY+++L ++ + + +IR+Y V D R + + Sbjct: 254 AMTTIQARLYQMKLDQQRSQQQLARQQQMGTAARSEKIRTYNF-TQDRVTDHRAGVNMFN 312 Query: 335 PSDVLDG--DLDDFM 347 D L G LD+ + Sbjct: 313 LQDFLLGGDRLDEMI 327 >gi|302672683|ref|XP_003026029.1| hypothetical protein SCHCODRAFT_27452 [Schizophyllum commune H4-8] gi|300099709|gb|EFI91126.1| hypothetical protein SCHCODRAFT_27452 [Schizophyllum commune H4-8] Length = 251 Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats. Identities = 80/239 (33%), Positives = 122/239 (51%), Gaps = 9/239 (3%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 LE+ G GG E + L RMYTR+A + ++ + + E G++ + + Sbjct: 7 LELKPGVGGAEGALFCVDLERMYTRYAAEHGWQLTPVNRSETESGGLREVLMEV--RKGK 64 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP---VVDDSIEIEISESDCRIDTYRA 235 G E G HR+ RI +S+ R HTS +S+ V P + D RI+ RA Sbjct: 65 GRGDFESGAHRVQRIPATESSGRVHTSTASVLVLPLVEEGTPTTTPLFKMEDVRIEVMRA 124 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 GAGGQHVN T+SAVR+THIPTG+VV Q ERSQH N+ +A+ +L ++L L + E Sbjct: 125 RGAGGQHVNKTESAVRLTHIPTGIVVAMQDERSQHVNRRRAFTVLTSRLLAQRLVQEAED 184 Query: 296 ANIGESS-KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352 +S + + +IR+Y P + D R + + V++G L+ ++A A Sbjct: 185 RRKRRNSLVSGVDRSDKIRTYNW-PQSRITDHRIGMSV-NLEPVMEGHGLETLIRALAA 241 >gi|148703821|gb|EDL35768.1| mitochondrial translational release factor 1, isoform CRA_c [Mus musculus] Length = 436 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 91/351 (25%), Positives = 148/351 (42%), Gaps = 31/351 (8%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 ++ + L+ + + +N + + L R L + +EIQ+ L L Sbjct: 81 EDLNKEYQTLDQCLQ--GISENEGDRRALHRRHAQLAPLAAVYQEIQEAEQAIEELESLC 138 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFES-------LLSGEADSNDAYLEVHAG--AGG 127 + Q + ++ + + + D +D LEV +G GG Sbjct: 139 KSLNKQDEKQLQELVSEERQIIDQKIHRLYSELLERLVPKEKYDWSDVILEVTSGRTTGG 198 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 Q + + MY ++ + +K E L + G+ A I G + Y LK E G+ Sbjct: 199 DICQQFTREIFDMYQNYSYYKHWKFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 258 Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 HR+ RI +SR + + + D +++++ D R+DT+RA GAGGQHVNT Sbjct: 259 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKVDPKDLRVDTFRARGAGGQHVNT 318 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TD V V+CQQERSQ KNK A +LRA+LY+ ++K K + Sbjct: 319 TDRLV----------VECQQERSQLKNKEIALRVLRARLYQQIIEKDRCQQQNA--RKLQ 366 Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351 +G +IR+Y V D R E + L G+ LD ++ L Sbjct: 367 VGTRAQSERIRTYNF-TQDRVTDHRIAYEVRDIKEFLRGEKCLDQLIERLL 416 >gi|302759761|ref|XP_002963303.1| hypothetical protein SELMODRAFT_438470 [Selaginella moellendorffii] gi|300168571|gb|EFJ35174.1| hypothetical protein SELMODRAFT_438470 [Selaginella moellendorffii] Length = 391 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 88/342 (25%), Positives = 156/342 (45%), Gaps = 33/342 (9%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLILLE 74 + R + L+ +P + + + +E ++LD ++ IK ++ + + L++ Sbjct: 57 SIEDRHACLSEALLEPGIAS--EKLIKMNKELRNLDYSVDMIKALRAKEKEVIGLKELVK 114 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 ++E+++ L ++ L + ++ + + D Sbjct: 115 ESVEDEEMRRLASGELQTATREVRDAQHDVLLELIPKDEAARSRAGKCSLM--CLMFDMF 172 Query: 135 NMLLRM--YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 +++ R Y ++A ++ E L I + G K A+ I G YG LK E GVHR+ R Sbjct: 173 HLIFRSWRYDKYAANNSWRFEVLSITTTDTRGYKEASAAISGDGVYGALKFESGVHRVQR 232 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + + R HTS +S+ + P + +++EI + +IDTYRA GAGGQHVNTT SAVR+ Sbjct: 233 VPVTEKAGRIHTSTASVAILP-EANEVDVEIRNDEIKIDTYRAGGAGGQHVNTTCSAVRV 291 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WG 309 TH PTG+VV Q R EL++ A+ E + +IG Sbjct: 292 THAPTGIVVAIQDTRLY------------------ELERSRAAASRSELRQDQIGSSDRS 333 Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKAT 350 +IR+Y P V D R + + + +++G L+ F+ A Sbjct: 334 ERIRTYNF-PQGRVTDHRVGVTQHAIEQIMEGIGLEIFVNAL 374 >gi|213622420|ref|ZP_03375203.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 240 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 142/233 (60%), Positives = 171/233 (73%) Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ AG+GG Sbjct: 1 DVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGG 60 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 TE+QDWA+MLLRMY RWAE R FKTE +E +GE AGIKSAT+ I G AYGWL+ E GV Sbjct: 61 TEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLRTETGV 120 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 HRLVR SP+DS RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+ Sbjct: 121 HRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTE 180 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+QK+ E Sbjct: 181 SAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAME 233 >gi|242814526|ref|XP_002486386.1| mitochondrial translation release factor (RF-1), putative [Talaromyces stipitatus ATCC 10500] gi|218714725|gb|EED14148.1| mitochondrial translation release factor (RF-1), putative [Talaromyces stipitatus ATCC 10500] Length = 427 Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats. Identities = 94/338 (27%), Positives = 150/338 (44%), Gaps = 28/338 (8%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ---ETSDNLQRIKLEV 99 + + L +K+ L L + + S L+ + +L + Sbjct: 68 TKVAKRMGELAPVAQAVKDWDKTHETITELNSLINDPETDSELRSLAIEDLEQTQTQLPI 127 Query: 100 EYKQFESLLSGEADSN--DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157 ++ +S L LE+ GAGG E+ +A LLRMY + ++ +T ++ Sbjct: 128 VSEKLKSALIPRHPFAALPCLLEIRPGAGGDEAGLFAYELLRMYQSFCSRKGLRTSIVKQ 187 Query: 158 HDGEEAGIKSAT---LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP- 213 E T + I+ P +Y L+ E GVHR+ R+ ++ R HTS S+ + P Sbjct: 188 DMEESTSNDRVTEAVVEIETPGSYDILRTEIGVHRVQRVPATEAKGRTHTSAVSVMILPS 247 Query: 214 ------------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 D + + ++ + R + RASGAGGQHVN T+SA+R+THIPTG+ V Sbjct: 248 FPESGANEDNLNFEDPNSDYYVNPQEVRSEKMRASGAGGQHVNKTESAIRLTHIPTGLTV 307 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKRE----EIANIGESSKTEIGWGRQIRSYVL 317 Q RSQH N+ +AW +LRAKL E + RE ++ ++G G ++R+Y Sbjct: 308 SMQDSRSQHANRKKAWQLLRAKLAERRREAREEEMVKLRRGAMGGVAKMGRGDKVRTYNF 367 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353 D R+ I VLDG L+ M + Sbjct: 368 S-QSRCTDHRSGITVHDLDSVLDGGHGLETVMDSVRTW 404 >gi|256079594|ref|XP_002576071.1| peptide chain release factor [Schistosoma mansoni] gi|238661330|emb|CAZ32306.1| peptide chain release factor, putative [Schistosoma mansoni] Length = 1202 Score = 136 bits (343), Expect = 4e-30, Method: Composition-based stats. Identities = 86/375 (22%), Positives = 157/375 (41%), Gaps = 57/375 (15%) Query: 8 NCLGGLFD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER---------QHLDNAI 56 L FD N + + +E ++L + Sbjct: 36 EDLREHFDAFKKNIISEYENVTKLMTSG------------AKECDLLPLSECWKNLRPIV 83 Query: 57 SFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD--- 113 I+E+ L + + +L + + +D +LE + + + + Sbjct: 84 DVIEELDILLEADKEVDQLVTDIVGTDTEDDVNDLKAIAELERKQRNVQREALEKKLLSL 143 Query: 114 ---------SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE-------- 156 ++ +E+ AGAGG E+ +A+ L+ MY +A ++ + L Sbjct: 144 LLPIDERDLNSAVIMELFAGAGGKEAGLFAHDLMNMYHAFAVQQNWSFTVLHKTVMSNEE 203 Query: 157 -----------IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 E G + + AYG LK E GVHR+ R+ S ++ HTS Sbjct: 204 CAPSHNETSLSYVRVEIEGEPTTEAGVMSLGAYGQLKWEAGVHRVQRVPVTSSQNKIHTS 263 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 ++ + P + ++++I ++D + + +R +G GGQ+VN + SAVR+TH+PTG+V+ CQ+ Sbjct: 264 TVAVSIQP-KYEDVDVDIPDNDLKWEFHRPTGPGGQNVNKSTSAVRLTHLPTGIVISCQR 322 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQIRSYVLQPYQMVK 324 ER QH NK A +ML+ +L E+ L+ + + + S + +IR+Y P V Sbjct: 323 ERYQHVNKILALDMLKERLREIHLKSQSHLIDSIRRSHLGNLDRSEKIRTYNF-PQDRVT 381 Query: 325 DLRTNIEKTSPSDVL 339 D R N + + Sbjct: 382 DHRLNHSWNNLYRFM 396 >gi|47218558|emb|CAG10257.1| unnamed protein product [Tetraodon nigroviridis] Length = 438 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 90/336 (26%), Positives = 142/336 (42%), Gaps = 32/336 (9%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 L+R L + + ++ D ++ L + + L+ + + K Sbjct: 95 LLRRHAELLPVATALDSVRRASRDREEVVSLLQSSSGVDEDKLFTQQLEEEEGHISQKLL 154 Query: 105 ESL--------LSGEADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + DS++ LEV +G GG Q + + MY +A + + E Sbjct: 155 SLRRDLVKALLPADPLDSSNVLLEVVSGRTTGGDICQQFTREVFDMYQGFASHKNWDFEP 214 Query: 155 LEIHDGE------------EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 + + E G+ A I G N Y LK E G HR+ RI +SR Sbjct: 215 VNYTNAEYGCDVRGCCLLLSGGLHHAAARITGENVYRHLKHEGGTHRVQRIPEVGLSSRM 274 Query: 203 H--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 + + + +++ + D RIDT+R+ GAGGQ VNTTDSAVR+ H+PTG+ Sbjct: 275 QRIHTGTMTVIILPQPAELDLHVDPKDLRIDTFRSRGAGGQSVNTTDSAVRVVHLPTGIA 334 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW---GRQIRSYVL 317 V+CQQ RSQ +N+ A LRA+LY+ L K E + + ++G +IR+Y Sbjct: 335 VECQQSRSQLQNRDTAMRALRARLYQARLGK--ESQRRLSARRQQVGTRSQSERIRTYNF 392 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351 V D RT + + G L D + L Sbjct: 393 S-QDRVTDHRTGYTARDIKEFMRGGQALQDLIGDVL 427 >gi|255637443|gb|ACU19049.1| unknown [Glycine max] Length = 155 Score = 136 bits (342), Expect = 5e-30, Method: Composition-based stats. Identities = 65/140 (46%), Positives = 90/140 (64%) Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 D+S+ +EI E D I RA G GGQ+VN ++AVRITHIPTGV V+C +ERSQ NK Sbjct: 5 PDESMNVEIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKI 64 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 +A + L+AKL + ++R + WG+QIR+YV PY++VKD+RT E T Sbjct: 65 RALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETTD 124 Query: 335 PSDVLDGDLDDFMKATLAIK 354 + V+DG+LD F+K+ L K Sbjct: 125 ITSVMDGELDPFIKSYLKHK 144 >gi|315926256|ref|ZP_07922444.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus ATCC 23263] gi|315620443|gb|EFV00436.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus ATCC 23263] Length = 173 Score = 136 bits (341), Expect = 7e-30, Method: Composition-based stats. Identities = 92/170 (54%), Positives = 120/170 (70%), Gaps = 2/170 (1%) Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 G HRLVRISP+D+ RR TSF+ + V PVV+++ ++I SD R+D + ASG GGQ VNT Sbjct: 1 GTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPGSDLRVDVFHASGPGGQGVNT 60 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVR+TH+PTG+VV CQ ERSQ +NKA A +L+AKL E +++E N +S Sbjct: 61 TDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSEGN- 119 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 WG Q+RSYVL PYQMVKDLRTN E + V DGD+DDF+ A + ++ Sbjct: 120 -SWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 168 >gi|255023944|ref|ZP_05295930.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-208] Length = 184 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 68/177 (38%), Positives = 103/177 (58%), Gaps = 7/177 (3%) Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 K G HR+ R+ +S R HTS +++ + P + +EIE+ + D R DT+ ++GAGGQ Sbjct: 1 KYXNGAHRVQRVPETESGGRIHTSTATVAILP-EAEEVEIELHDKDIRTDTFASTGAGGQ 59 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 VNTT SAVR+THIPTG+VV Q ERSQ KNK +A +LRA++Y+ +RE + Sbjct: 60 SVNTTMSAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKF--EREAREEYDAN 117 Query: 302 SKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 K+ +G G +IR+Y P V D R + +++G LD+ + A + + Sbjct: 118 RKSAVGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQ 173 >gi|170595371|ref|XP_001902354.1| Peptidyl-tRNA hydrolase domain containing protein [Brugia malayi] gi|158590015|gb|EDP28797.1| Peptidyl-tRNA hydrolase domain containing protein [Brugia malayi] Length = 382 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 97/355 (27%), Positives = 159/355 (44%), Gaps = 24/355 (6%) Query: 6 QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 + F+ +L L +D N HL+ + + D+ Sbjct: 17 RTETARTYFEV--IFSKLKALQKDGKDESRINNSAL-------VTHLETVTTLAHKFYDK 67 Query: 66 LCDNLILLELALEEDDCSILQET--SDNLQRIKLEVEYKQFESLLSGEADS---NDAYLE 120 L L L E +D I + +L+ + ++ + N+ LE Sbjct: 68 LEMLTQLDLLLKEGNDPEIQEIAKLDSEQLTEELDSVVNKLTDVVIPVTEYDLLNNCQLE 127 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + G GG E+ +A+ L +MY +A+ K+K ++ GI+SA + ++G A+ Sbjct: 128 ITPGVGGVEASLFASELAQMYHNYAQFMKWKWTPYQMDVSPSGGIRSAVVFVRGNGAFRT 187 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ E GVHR+ R D R HTS S + V P D IE ++ +D +++T RASG GG Sbjct: 188 LRYEAGVHRVQRFPVTDKT-RMHTSTSVVAVLP-EPDKIEACVTPADVKVETMRASGPGG 245 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q+VN +AVR+TH TGV V C ER+Q+ N A+ L A L + +L E Sbjct: 246 QNVNQRSTAVRLTHRETGVTVHCTDERTQYSNMEIAYKRLAAILLQRKLD--ETQKQYSS 303 Query: 301 SSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKAT 350 S K +IG ++R+Y + Q V D R ++V+ G+ L+ +++ Sbjct: 304 SRKLQIGTKARAEKVRTYNFKDDQ-VTDHRLGRAWQGVANVMKGNSVLNQIIQSL 357 >gi|194705206|gb|ACF86687.1| unknown [Zea mays] gi|195648693|gb|ACG43814.1| hypothetical protein [Zea mays] Length = 230 Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats. Identities = 73/221 (33%), Positives = 128/221 (57%), Gaps = 12/221 (5%) Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY R+ E+ +K + + + E G K+ + +KG Y LK E GVHR+ R+ ++ Sbjct: 1 MYQRYCERNNWKFKPVSCSEAEMGGYKTYVMEVKGKQVYSKLKFESGVHRVQRVPLTEAM 60 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS +++ + P D +++ I D + T R+ GAGGQ+VN ++AV + H PTG+ Sbjct: 61 GRVHTSTATVAIMP-EADEVDVVIDPKDIELKTARSGGAGGQNVNKVETAVDLIHKPTGI 119 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316 + C +ERSQ +N+ +A+ +LRAKLYE++L++++E ++ K ++G G +IR+Y Sbjct: 120 RIFCTEERSQLQNRERAFQLLRAKLYEIKLREQQE--SLRNQRKLQVGTGARSEKIRTYN 177 Query: 317 LQPYQMVKDLR--TNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + V D R N E T L GD++ +++ +++ Sbjct: 178 YKD-NRVTDHRLKMNFELT---SFLLGDIESAIQSCATMEQ 214 >gi|329942484|ref|ZP_08291294.1| peptide chain release factor 2 [Chlamydophila psittaci Cal10] gi|328815394|gb|EGF85382.1| peptide chain release factor 2 [Chlamydophila psittaci Cal10] Length = 272 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 117/240 (48%), Positives = 160/240 (66%) Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 + + L D + ++ + + + + LLSGE D N +L ++AGA Sbjct: 1 MDNLAFFLNDGDVSADPELREDLEKEFAICENILSEWETQRLLSGEVDKNPCFLTINAGA 60 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GGTES DW ML RMY RWA + ++K E ++ +G+ AGIK T+ G AYG+ K E+ Sbjct: 61 GGTESCDWVEMLFRMYCRWAAQHQWKVEVIDRQEGDVAGIKHVTVKFSGDYAYGYAKAER 120 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHRLVRISP+DSN++RHTSF+S+ VYP +DD IEI+I +D RIDT+R+SGAGGQHVN Sbjct: 121 GVHRLVRISPFDSNAKRHTSFASVDVYPEIDDEIEIDIRPNDLRIDTFRSSGAGGQHVNV 180 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 TDSAVRITHIPTG++V CQ+ERSQ +N+ MLRA++Y+ LQ+R E I +K + Sbjct: 181 TDSAVRITHIPTGIMVSCQRERSQIQNRESCMKMLRARMYQQILQERLEKQLIDRKNKKK 240 >gi|330951103|gb|EGH51363.1| peptide chain release factor 1 [Pseudomonas syringae Cit 7] Length = 243 Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats. Identities = 71/235 (30%), Positives = 110/235 (46%), Gaps = 3/235 (1%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + RE ++ ++ ++ D L Sbjct: 9 LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYAQLLRVQGDLEGAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + + Q L D + +LE+ AG GG E+ Sbjct: 69 LKDSDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 ++ L RMY+R+AE+R ++ E L ++GE G K ++G + YG LK E G HR+ R Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQR 188 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 + +S R HTS ++ V P D+ IEI+ +D R+DTYR+SGAGGQHVN TD Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTD 243 >gi|301347115|ref|ZP_07227856.1| peptide chain release factor 2 [Acinetobacter baumannii AB056] gi|301512357|ref|ZP_07237594.1| peptide chain release factor 2 [Acinetobacter baumannii AB058] gi|301597511|ref|ZP_07242519.1| peptide chain release factor 2 [Acinetobacter baumannii AB059] Length = 113 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 69/112 (61%), Positives = 84/112 (75%), Gaps = 1/112 (0%) Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+N TDSAVR+THIPTG+VV CQ +RSQH N+ AW LRAKLYELE+QKR E A E Sbjct: 1 HINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMQKRNEAAQALED 60 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 SK++IGWG QIRSYVL +KDLRT +E ++ VLDGDLD F++A+L Sbjct: 61 SKSDIGWGSQIRSYVLDD-SRIKDLRTGVENSNTGAVLDGDLDRFIEASLKQ 111 >gi|67526009|ref|XP_661066.1| hypothetical protein AN3462.2 [Aspergillus nidulans FGSC A4] gi|40743816|gb|EAA63002.1| hypothetical protein AN3462.2 [Aspergillus nidulans FGSC A4] Length = 367 Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats. Identities = 91/351 (25%), Positives = 148/351 (42%), Gaps = 38/351 (10%) Query: 18 NAVQRLSFLNTKTE---DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 N + L+ + DP + R L E + L Sbjct: 19 NLAAEHANLSNQLTTSFDP----------KIARRAGELGPVAKAWAEWSNANESMSELHS 68 Query: 75 LALEEDDCSILQETSDNLQRIKL-----EVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 + + D + L+ + + + + + LE+ GAGG E Sbjct: 69 MLEDPDTEAELRSIAVEELQTTEAKLTAISDNLKRALVPRHPFADLSCLLEIRPGAGGDE 128 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGE--EAGIKSATLLIKGPNAYGWLKGEQGV 187 + +A LL+MY + + ++ +++ G+ + A L ++ AY L+ E GV Sbjct: 129 ASIFAFELLQMYVAFCAHQGLRSTLMKLERGDNRADALTEAVLEVEAEGAYDLLRTESGV 188 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYP-------------VVDDSIEIEISESDCRIDTYR 234 HR+ R+ ++ R HTS S+ V P D + + I + R + R Sbjct: 189 HRVQRVPTTEAKGRTHTSAVSVMVLPSFPDTGGGDGAFNFDDPNSDYYIDPQEVRTEKMR 248 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 ASGAGGQHVN T+SA+R+TH+PTG+VV Q RSQH N+ +AW +LRAKL E + RE+ Sbjct: 249 ASGAGGQHVNKTESAIRLTHMPTGIVVSMQDSRSQHANRKKAWQILRAKLAEARQEAREQ 308 Query: 295 I----ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 +G G ++R+Y D R+ + +VL+G Sbjct: 309 ELVELRRGAMGGIGRMGRGDKVRTYNYG-QSRCTDHRSGFTVHNLDNVLEG 358 >gi|328853865|gb|EGG03001.1| hypothetical protein MELLADRAFT_109720 [Melampsora larici-populina 98AG31] Length = 413 Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats. Identities = 91/337 (27%), Positives = 158/337 (46%), Gaps = 18/337 (5%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 +R N W N K + + + + + + + + + ++ + D Sbjct: 50 KRFIKTNETIPSQGSWSNGEFLKK-SKRVDSIKSTLEEWERVMNLVSELQLISNTDPDPD 108 Query: 81 DCSI--------LQETSDNLQRIKLEVEYKQFESLLSGEADSNDA-YLEVHAGAGGTESQ 131 I + ++ + ESL + +E+ G GG E+ Sbjct: 109 MRQIALTELESLYSSSDQESSNNLSNIKSRLLESLFPTPISHRQSALVEIKPGVGGVEAA 168 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEA----GIKSATLLIKGPNAYGWLKGEQGV 187 +A L+ +Y R A ++K+K + + + G++ ATL I+G + Y ++ E GV Sbjct: 169 HFATSLMNLYNRHALRQKWKVKPVNVEFMVSGHSMDGLREATLEIEGEDVYKRMRWEAGV 228 Query: 188 HRLVRISPYDSNSRRHTSFSSIW--VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 HR+ R+ + S HTS +++ D E E D R++T R+ GAGGQHVN Sbjct: 229 HRVQRVPVMQNTSSVHTSTAAVLPLDPGNQDSQEEALFEEKDVRMETMRSQGAGGQHVNK 288 Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T+SAVR+TH+PTG+VV Q RSQH+N+A+A+ +LRA+L +L Q+++ S+ + Sbjct: 289 TESAVRLTHVPTGIVVSMQDSRSQHQNRARAFMILRARLSDLRNQQKQVEERGLRLSQVK 348 Query: 306 IG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 ++IR+Y Q V D R + DV++G Sbjct: 349 TSDRNQKIRTYNFQ-QGRVTDHRIGLTLPRLHDVMEG 384 >gi|198421557|ref|XP_002128173.1| PREDICTED: similar to mitochondrial translational release factor 1-like [Ciona intestinalis] Length = 432 Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats. Identities = 67/293 (22%), Positives = 126/293 (43%), Gaps = 8/293 (2%) Query: 55 AISFIKEIQDRLCDNLILLELALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGE 111 + + E L + L + +++ E + +++ + Sbjct: 109 VVETLNERLHDLGEIEKLSKEFKSDEEMFKETEIERRSLEDEISEIKTSIVESLVTDKDS 168 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK--SAT 169 D++ A LEV G GG E+ +A + MY ++ + + + +E GE + +A Sbjct: 169 EDNDGAVLEVTPGIGGVEAAMFATEIFDMYQKFCHRSGYDLDVVEYDMGENGALVKANAV 228 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + AY K E G+HR+ R+ + + R HTS S+ V P + I + D + Sbjct: 229 VSSGDGYAYSLFKHEAGIHRVQRVPKTEKSGRLHTSTVSVAVLP-KSNEILPPLQRKDLK 287 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 I ++SG GGQH N+T S + HIPTG +V+ ++ R Q N +A L ++ + Sbjct: 288 ITFSKSSGHGGQHANSTLSCAVVCHIPTGNIVRVEETRCQKTNLDRAQQKLTHIVHSEAM 347 Query: 290 QKREEIANIGESSKTEI-GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 + ++ N +T +IR+Y + + D R + + + L+G Sbjct: 348 KAKQAQVNSVRRKQTRSRERSDKIRTYNFH-HSRITDHRIGVTLSGIEEFLNG 399 >gi|30692917|ref|NP_198466.2| HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109); translation release factor/ translation release factor, codon specific [Arabidopsis thaliana] gi|332006669|gb|AED94052.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana] Length = 391 Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats. Identities = 102/269 (37%), Positives = 158/269 (58%), Gaps = 4/269 (1%) Query: 1 MKL-SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59 +++ S ++ + + Q ++ L +K D W + +A+ + L + + + Sbjct: 88 VEIASARVEEIRASANLQQLEQEITNLESKATDTSFWDDRTKAQETLSSLNDLKDRMRLL 147 Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSNDA 117 E + + D +++L E D + + ++ + LLSG D A Sbjct: 148 SEFKTMVEDAETIVKLTEEMDSTDVSLLEEAMGIIKELNKSLDKFELTQLLSGPYDKEGA 207 Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 + + AGAGGT++QDWA+MLLRMY RW EK+++KT+ +E+ +GEEAGIKSATL I+G A Sbjct: 208 VVYITAGAGGTDAQDWADMLLRMYMRWGEKQRYKTKVVEMSNGEEAGIKSATLEIEGRYA 267 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRAS 236 YG++ GE+G HR+VR SP++S R TSFS + V P + ++++ IEI E D I RA Sbjct: 268 YGYISGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAG 327 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 G GGQ+VN ++AVRITHIPTGV V+C Sbjct: 328 GKGGQNVNKVETAVRITHIPTGVAVRCTD 356 >gi|323452428|gb|EGB08302.1| hypothetical protein AURANDRAFT_13671 [Aureococcus anophagefferens] Length = 235 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 96/232 (41%), Positives = 137/232 (59%), Gaps = 7/232 (3%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 + E+ ++G D D LE+ AGAGG ++Q+W M+ RMY R+ EKR F E +G+ Sbjct: 1 ELEAAMTGPYDGCDCRLEITAGAGGLDAQEWTAMVARMYARFGEKRGFSVVEAERSEGDH 60 Query: 163 AGIKSAT-LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 G L I+G NA+G +GE+G HRLVR SP++S ++R TSF+S+ P + D Sbjct: 61 PGCVKGVSLEIRGANAFGLFRGEKGAHRLVRQSPFNSAAKRQTSFASVEPTPDLPDDHPD 120 Query: 222 EI------SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 +D + T RA GAGGQ+VN ++AVR+TH+PTG+ V+C +ER+Q NKA Sbjct: 121 LPADVAELDPADLEVTTARAGGAGGQNVNKVETAVRVTHVPTGLRVRCARERTQGANKAI 180 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 A MLRAKL ++R + +G +RSYVL PY++VKD R Sbjct: 181 ALTMLRAKLVAAMAEQRAATLADIRGDRVAADFGASVRSYVLHPYKLVKDDR 232 >gi|328788515|ref|XP_001119866.2| PREDICTED: peptide chain release factor 1-like, mitochondrial-like [Apis mellifera] Length = 354 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 96/292 (32%), Positives = 142/292 (48%), Gaps = 11/292 (3%) Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES---LLSGEA 112 I N + ++ L + + +L +Q + Sbjct: 34 IKKYLNYLMNAYQNEDERKGINGNEELKNLAKEEELTYMQQLLEIDEQILNIIIKYIDVE 93 Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 ++ +E+ G GG E+ +A LL MY ++ F E LEI E G++ AT+LI Sbjct: 94 HYDNIIMEIVPGVGGQEAMLFAKDLLNMYIKYFNHIGFNYEILEILSNELNGLRKATVLI 153 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 NA+ LK E GVHR+ RI + + R HTS + + + P ++I++ + D I++ Sbjct: 154 SDNNAFKKLKYEGGVHRVQRIPATEKSGRLHTSTAVVTILP-EPKDVDIKLEDKDLIIES 212 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 +ASGAGGQHVNTTDSA+RITHIPTG +V CQ RSQ KNK A L++ LYE EL K+ Sbjct: 213 KKASGAGGQHVNTTDSAIRITHIPTGTIVTCQTNRSQIKNKQIALTKLKSLLYEEELNKQ 272 Query: 293 EEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLD 340 N K +IG +IR+Y V D R N + + ++ Sbjct: 273 VSFINQI--RKKQIGKRLRNEKIRTYNFN-QDRVTDHRIPNGTMYNLKEFME 321 >gi|259485545|tpe|CBF82657.1| TPA: mitochondrial translation release factor (RF-1), putative (AFU_orthologue; AFUA_3G05410) [Aspergillus nidulans FGSC A4] Length = 418 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 91/351 (25%), Positives = 148/351 (42%), Gaps = 38/351 (10%) Query: 18 NAVQRLSFLNTKTE---DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 N + L+ + DP + R L E + L Sbjct: 47 NLAAEHANLSNQLTTSFDP----------KIARRAGELGPVAKAWAEWSNANESMSELHS 96 Query: 75 LALEEDDCSILQETSDNLQRIKL-----EVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129 + + D + L+ + + + + + LE+ GAGG E Sbjct: 97 MLEDPDTEAELRSIAVEELQTTEAKLTAISDNLKRALVPRHPFADLSCLLEIRPGAGGDE 156 Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGE--EAGIKSATLLIKGPNAYGWLKGEQGV 187 + +A LL+MY + + ++ +++ G+ + A L ++ AY L+ E GV Sbjct: 157 ASIFAFELLQMYVAFCAHQGLRSTLMKLERGDNRADALTEAVLEVEAEGAYDLLRTESGV 216 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYP-------------VVDDSIEIEISESDCRIDTYR 234 HR+ R+ ++ R HTS S+ V P D + + I + R + R Sbjct: 217 HRVQRVPTTEAKGRTHTSAVSVMVLPSFPDTGGGDGAFNFDDPNSDYYIDPQEVRTEKMR 276 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 ASGAGGQHVN T+SA+R+TH+PTG+VV Q RSQH N+ +AW +LRAKL E + RE+ Sbjct: 277 ASGAGGQHVNKTESAIRLTHMPTGIVVSMQDSRSQHANRKKAWQILRAKLAEARQEAREQ 336 Query: 295 I----ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 +G G ++R+Y D R+ + +VL+G Sbjct: 337 ELVELRRGAMGGIGRMGRGDKVRTYNYG-QSRCTDHRSGFTVHNLDNVLEG 386 >gi|326520682|dbj|BAJ92704.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 236 Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats. Identities = 71/221 (32%), Positives = 128/221 (57%), Gaps = 8/221 (3%) Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 +RMY R+ E +K + + + E+ G K+ + +KG Y LK E GVHR+ R+ + Sbjct: 6 VRMYQRYCELNNWKFKPVSCSEAEKGGFKTYVMEVKGKQVYSKLKFESGVHRVQRVPQTE 65 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 + R HTS +++ + P D +++ I D + R+ GAGGQ+VN ++A+ + H PT Sbjct: 66 TMGRVHTSTATVAIMP-EADEVDVVIDPKDIELKAARSGGAGGQNVNKVETAIDLIHKPT 124 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314 G+ + C +E+SQ +NK +A+ +LRAKLYE++L++++E +I ++G G +IR+ Sbjct: 125 GIRIFCTEEKSQLQNKERAFQLLRAKLYEIKLREQQE--SIRTQRLLQVGTGARSEKIRT 182 Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 Y + V D R + S L GD++ +++ A+++ Sbjct: 183 YNYKD-NRVTDHRLKM-NFILSSFLLGDIESAIQSCAALEQ 221 >gi|312082910|ref|XP_003143641.1| peptidyl-tRNA hydrolase domain-containing protein [Loa loa] gi|307761198|gb|EFO20432.1| peptidyl-tRNA hydrolase domain-containing protein [Loa loa] Length = 384 Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats. Identities = 92/355 (25%), Positives = 157/355 (44%), Gaps = 24/355 (6%) Query: 6 QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 + F +L+ L + + HL+ + + D+ Sbjct: 17 RTETAQTYFQI--ISAKLNALQKDGNNESRINDSAS-------ITHLETVTTLARRFYDK 67 Query: 66 LCDNLILLELALEEDD--CSILQETSDNLQRIKLEVEYKQFESLLSGEADS---NDAYLE 120 L L L E +D + + ++L+ + ++ + N+ LE Sbjct: 68 LGMLTELDMLLKEGNDAEIQKIAKLDSEQLTVELDSIVNELTDVVIPVTEYDSLNNCQLE 127 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + G GG E+ +A+ L MY +A+ K+K ++ GI+SA + ++G A+ Sbjct: 128 IIPGVGGVEASLFASELAEMYHNYAQFMKWKWTPYQVDASPSGGIRSAVVFVRGNGAFRA 187 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 L+ E GVHR+ R D R HTS S + V P + IE ++ +D +++T RASG GG Sbjct: 188 LRYEAGVHRVQRFPVTDKT-RMHTSTSVVAVLP-EPEKIEACVTPADVKVETMRASGPGG 245 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q+VN +AVR+TH TG+ V C ER+Q+ N A+ L A L + +L E Sbjct: 246 QNVNQRSTAVRLTHRETGIAVHCVDERTQYSNMEIAYKRLAAILLQRKLD--ETQKQYSS 303 Query: 301 SSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKAT 350 S K ++G ++R+Y + Q V D R ++V+ G LD +++ Sbjct: 304 SRKLQVGTKARAEKVRTYNFKDDQ-VIDHRLGKAWQGVANVMKGSSVLDQIIQSL 357 >gi|71900150|ref|ZP_00682291.1| Class I peptide chain release factor [Xylella fastidiosa Ann-1] gi|71730099|gb|EAO32189.1| Class I peptide chain release factor [Xylella fastidiosa Ann-1] Length = 175 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 62/162 (38%), Positives = 100/162 (61%), Gaps = 7/162 (4%) Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S R HTS +++ + P D+ +I I+ +D +IDT+R+SGAGGQHVN T+SA+RI Sbjct: 1 MPATESQGRIHTSAATVAIIPEADEIADISINPADLKIDTFRSSGAGGQHVNKTESAIRI 60 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR-- 310 TH+PTGVVV+ Q ERSQH N+ +A L+A+L +E ++ ++ + K ++G G Sbjct: 61 THLPTGVVVESQTERSQHANRDKAMKRLKAQL--IESERSQQATAEAMTRKLQVGSGDRS 118 Query: 311 -QIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKAT 350 +IR+Y P + D R N+ ++++GDLD + Sbjct: 119 QRIRTYNF-PQGRITDHRVENLTLYDLPNIIEGDLDPLIDRL 159 >gi|330802966|ref|XP_003289482.1| hypothetical protein DICPUDRAFT_92304 [Dictyostelium purpureum] gi|325080440|gb|EGC33996.1| hypothetical protein DICPUDRAFT_92304 [Dictyostelium purpureum] Length = 226 Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats. Identities = 80/216 (37%), Positives = 126/216 (58%), Gaps = 9/216 (4%) Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY + E++ +K E LE E G + T+ I G +G+LK E GVHR+ R+ ++ Sbjct: 1 MYRNYCEQKGWKFETLESQSSEVGGFRDCTISISGKGVFGFLKYESGVHRVQRVPDTETQ 60 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS ++ + P ++++I + D ++D +R+SG GGQ VNTTDSAVR+TH+PTG+ Sbjct: 61 GRIHTSTITVAILP-EPKEVDLQIHDRDIKVDVFRSSGNGGQSVNTTDSAVRMTHLPTGI 119 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WGRQIRSYV 316 VVQ Q ERSQ +N+A+A +LRA++YE E Q+ ++IG +IR+Y Sbjct: 120 VVQMQDERSQLQNRAKALKILRARVYEQERQRLHSERE--RERNSQIGNATRSERIRTYN 177 Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351 P + D R +I + S ++ + L+ F+ L Sbjct: 178 Y-PQDRITDHRVSI-NGNLSSCMEEEGLEGFIDEIL 211 >gi|224001842|ref|XP_002290593.1| peptide chain release factor 1 [Thalassiosira pseudonana CCMP1335] gi|220974015|gb|EED92345.1| peptide chain release factor 1 [Thalassiosira pseudonana CCMP1335] Length = 282 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 88/252 (34%), Positives = 137/252 (54%), Gaps = 19/252 (7%) Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK----------RKFKTE 153 + S+DA +++ AG GG E+ +A+ +L Y A+ + + E Sbjct: 36 LNPDDLQDLTSSDAVIDIRAGTGGDEACLFASEILACYEATAKAGGADESGNGGKSWDLE 95 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 L + + GIK A+L++K YG+ + E GVHR+ R+ D+ + TS S+ V P Sbjct: 96 FLSLSRTDLGGIKEASLILKQLGPYGFFQYESGVHRVQRVPVNDN--KLQTSAVSVAVLP 153 Query: 214 VVDDS-IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 V DS I + ++ +I+T RASGAGGQHVNTT+SAVR+THIPTG++ Q+ERSQHKN Sbjct: 154 SVPDSLIAEALPPTELKIETMRASGAGGQHVNTTESAVRVTHIPTGIMAYMQEERSQHKN 213 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTN 329 KA+A ++ +++Y L +K +E N + + +G +IR+Y P + D R Sbjct: 214 KAKALKLVASRVYAL--RKEQERKNRSAARSSLMGGGDRSERIRTYNF-PQDRITDHRCK 270 Query: 330 IEKTSPSDVLDG 341 + L G Sbjct: 271 VSVQGVQSWLGG 282 >gi|324506204|gb|ADY42656.1| Peptide chain release factor 1 [Ascaris suum] Length = 376 Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats. Identities = 81/311 (26%), Positives = 141/311 (45%), Gaps = 18/311 (5%) Query: 45 LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104 L +E + + + + D L +A E + + + + Sbjct: 56 LSKEFIMRRDELLQLNALMSAESDV-ELETMARNERVLLESELNDLARNIVDAVMPRTEL 114 Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 + LEV AG GG E+ + + L+ MY +A + + ++ + + G Sbjct: 115 -------DVLSKCQLEVTAGVGGIEAMLFTSELVDMYRNFAAFKGWTWTVMQQDNIQLGG 167 Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 ++SA + + G AYG L+ E GVHR+ R+ D R HTS +S+ V P + ++ + Sbjct: 168 VRSALIAVSGDEAYGRLRFEAGVHRVQRMPITDKT-RMHTSTASVSVLP-EPEKVDAYVP 225 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 + +I+T RASG GGQ+VN +AVR+TH +G+ V C ER QH N A+ L A L Sbjct: 226 SNSVKIETMRASGPGGQNVNKRSTAVRVTHKSSGISVHCMDERFQHLNIQIAFRRLAAIL 285 Query: 285 YELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 + ++ + E + K ++G ++R+Y + V D R + +DV+ G Sbjct: 286 MQEKMDRIYE--KSAAARKLQVGSKARAEKVRTYNFKD-DRVTDHRLKKSWSRVTDVMRG 342 Query: 342 --DLDDFMKAT 350 +LD + Sbjct: 343 GHELDAIINEL 353 >gi|213403996|ref|XP_002172770.1| peptide chain release factor 1 [Schizosaccharomyces japonicus yFS275] gi|212000817|gb|EEB06477.1| peptide chain release factor 1 [Schizosaccharomyces japonicus yFS275] Length = 312 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 79/246 (32%), Positives = 123/246 (50%), Gaps = 9/246 (3%) Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 L A LEV AG GG+E+ +A+ LL MY R+ R +K + L + E Sbjct: 31 MHKLLSLKPNNYQAPALLEVRAGVGGSEAALFASELLSMYERYCAFRNWKWKPLSLSKTE 90 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI-- 219 + ++ + YG L E GVHR+ R ++ R HTS S+ V P V+ Sbjct: 91 NGNGITEAIVSVSGHVYGELFHEAGVHRVQRTPATETKGRLHTSTVSVIVLPTVNSQTLE 150 Query: 220 -EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 E ++ +D R+D RA GAGGQHVN T+SAVR+THIP+G+ V Q RSQH+NK +A Sbjct: 151 TESKLDANDIRVDVMRAKGAGGQHVNRTESAVRLTHIPSGITVCMQDSRSQHENKERALL 210 Query: 279 MLRAKLYELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 +LR+++ L + + ++ + ++ +IR+Y + D R + Sbjct: 211 ILRSRVAALRHENLQ--KQQHDARRKQVSSPVRSEKIRTYNYA-QNRITDHRCSCSMYDT 267 Query: 336 SDVLDG 341 ++G Sbjct: 268 EGFMEG 273 >gi|159900504|ref|YP_001546751.1| ATPase [Herpetosiphon aurantiacus ATCC 23779] gi|159893543|gb|ABX06623.1| ATPase AAA-2 domain protein [Herpetosiphon aurantiacus ATCC 23779] Length = 1027 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 74/353 (20%), Positives = 143/353 (40%), Gaps = 17/353 (4%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L +L L + A +R + L + P W + +A+ L+ E ++ + + Sbjct: 685 QLHNRLKHLIKQLNVVEARERQTELMDEMSSPSFWDDHEQAQFLLTELSNVARRVGRCDD 744 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ D LL+ E ++ + E +R++ ++ + + E L S D +DAY+ + Sbjct: 745 LRRLYDDADQLLQRIRERNERRLFPELMRMAKRLERDLRFAELEMLFSNPEDWHDAYIIL 804 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 + G W L Y W+ ++F+ + ++ E+ + TL I G A+G L Sbjct: 805 ESDQAGLR---WVRNLANAYLEWSLGKRFEAKVIDETPAEDN-LIRVTLQISGSGAFGLL 860 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + E G HR+ + + T + +D+ S+ + + RA G + Sbjct: 861 RSEAGTHRISETGG-EPRLKTVTQVQITVLPVPTEDTPAPASSDIEMAVMNTRADGYFLR 919 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 + T A+ +A +L L L +++ ++ + Sbjct: 920 KLRVTGRAIH-------RYSGAAAFACAGSERAVREMLLSILLGRLAMKQLDDFIQPSDD 972 Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 WG +RSY L +KD RT I T+P L G+LD F++A L + Sbjct: 973 -----AWGSVVRSYHLGKRSTIKDPRTEIVHTNPKAALAGELDLFIEAALRWR 1020 >gi|23335364|ref|ZP_00120601.1| COG1186: Protein chain release factor B [Bifidobacterium longum DJO10A] Length = 240 Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats. Identities = 77/226 (34%), Positives = 121/226 (53%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + + + D D + L T+ P LW + A+ + ++ + + Sbjct: 12 EARAKYESIAKALDVDRLKADIKDLETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNS 71 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 R+ D L+EL EE D L E + I+ +++ + ++LL GE D A + + Sbjct: 72 ASQRIDDVETLVELGHEEGDQDSLDEAQSEIGEIQKDLDQMEIQTLLDGEYDERSAVVTI 131 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 +GAGG ++ D+A MLLRMY R+ E+ FK + ++ EEAGIKSAT + P AYG L Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 E G HRLVRISP+D+ RR TSF+++ V P+V+ + I+I +D Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPYTD 237 >gi|225685111|gb|EEH23395.1| peptide chain release factor 1 [Paracoccidioides brasiliensis Pb03] Length = 316 Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 81/260 (31%), Positives = 129/260 (49%), Gaps = 26/260 (10%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT---EALEIHDGEEA 163 + LE+ GAGG E+ +AN LLRMYT + R + + + G Sbjct: 16 IPRHPFADLPCLLELRPGAGGDEAGIFANELLRMYTMFCANRGLRATLLKKESENAGASG 75 Query: 164 GIKSA----TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP------ 213 G + + I+ P +Y L+ E GVHR+ R+ +S R HTS S+ + P Sbjct: 76 GSEDRLAEAVMEIETPGSYETLRTEAGVHRVQRVPATESKGRTHTSAVSVVILPSFPRNG 135 Query: 214 --------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 D + + I + ++ RASGAGGQHVN T+SA+R+THIPTG+VV Q Sbjct: 136 EEGDGELNFDDPNSDFYIDPQEVNVEKMRASGAGGQHVNKTESAIRLTHIPTGIVVGMQD 195 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKRE----EIANIGESSKTEIGWGRQIRSYVLQPYQ 321 RSQH+N+ +AW +LRA++ + + RE ++ ++G G +IR+Y Sbjct: 196 SRSQHENRRKAWQLLRARIAQRRREAREEEMVKLRRGAMGGVGKMGRGDKIRTYNFG-QN 254 Query: 322 MVKDLRTNIEKTSPSDVLDG 341 D R+ + + ++++G Sbjct: 255 RCTDHRSGLTLHNLVNIMEG 274 >gi|60279679|ref|NP_001012512.1| peptide chain release factor 1, mitochondrial [Danio rerio] gi|58701973|gb|AAH90173.1| Zgc:113104 [Danio rerio] Length = 235 Score = 126 bits (317), Expect = 4e-27, Method: Composition-based stats. Identities = 69/210 (32%), Positives = 109/210 (51%), Gaps = 8/210 (3%) Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196 + MY +A + + E E G+ A++ + G + WLK E G HR+ RI Sbjct: 1 MFDMYQGFASYKNWDFELFNYTPAEYGGLHHASVRVSGECVFRWLKFEGGTHRVQRIPEV 60 Query: 197 DSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 +SR + + + + ++I+I+ D RIDT+R+ GAGGQHVNTTDSAVR+ H Sbjct: 61 GLSSRMQRIHTGTMTVIVLPQMEEVDIDIAPKDLRIDTFRSRGAGGQHVNTTDSAVRLVH 120 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW---GRQ 311 +PTG V +CQQ RSQ KN+ A +LRA+L++ + ++ E + + ++G + Sbjct: 121 LPTGTVSECQQFRSQLKNRETALRVLRARLHQCMMGQQRE--QTHTARRLQVGTRAQSER 178 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 IR+Y V D R + + G Sbjct: 179 IRTYNF-TQDRVTDHRIGFVTRDIKEFMRG 207 >gi|256045467|ref|ZP_05448354.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str. Rev.1] Length = 141 Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats. Identities = 62/134 (46%), Positives = 90/134 (67%), Gaps = 7/134 (5%) Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A +LRA+L Sbjct: 1 NEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARL 59 Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 Y++E QK + ++ ++++G G +IR+Y P V D R N+ V++G Sbjct: 60 YDMERQK--AESERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEG 116 Query: 342 DLDDFMKATLAIKK 355 +LD+ + A ++ + Sbjct: 117 ELDELVDALISDHQ 130 >gi|307198741|gb|EFN79544.1| Peptide chain release factor 1-like, mitochondrial [Harpegnathos saltator] Length = 362 Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats. Identities = 93/292 (31%), Positives = 149/292 (51%), Gaps = 16/292 (5%) Query: 54 NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113 + I+ +QD + + + +LA EE+ Q + + + + E Sbjct: 51 QLVENIQNLQDLVKQDTEIKKLAEEEELVYKEQLDELDKNLLDIILADMCKEC------- 103 Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 ++ +E+ AG GG E+ + L MY +AE E L++ + G ++ T+++ Sbjct: 104 CDNIIIEITAGVGGQEAMLFVKNLYEMYIGYAEYLGLCHEVLDMDTTDCNGYRNVTIIVS 163 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G + E GVHR+ R+ + R HTS +S+ + P+ +EI I+E D +I+T Sbjct: 164 GKQTSK-FRYEGGVHRVQRVPTTEKLGRVHTSTASVAILPI-PSEVEIVINERDLKIETK 221 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 RASG+GGQHVN T+SAVRITHIPTG++V+CQ RSQ +NK A LR +YE +L K+ Sbjct: 222 RASGSGGQHVNKTNSAVRITHIPTGLIVECQVHRSQIRNKKLAMMRLRNMMYEQQLNKQT 281 Query: 294 EIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDG 341 + K +IG G ++R+Y V D R N + S+ + G Sbjct: 282 SFRSEL--RKKQIGMGFRNEKVRTYNYN-QDRVTDHRLQNGTFYNLSEFMQG 330 >gi|242087755|ref|XP_002439710.1| hypothetical protein SORBIDRAFT_09g018740 [Sorghum bicolor] gi|241944995|gb|EES18140.1| hypothetical protein SORBIDRAFT_09g018740 [Sorghum bicolor] Length = 409 Score = 125 bits (314), Expect = 8e-27, Method: Composition-based stats. Identities = 79/362 (21%), Positives = 160/362 (44%), Gaps = 13/362 (3%) Query: 3 LSRQLNCL--------GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN 54 L +++ + + A QR+ +LW N ++ + Sbjct: 51 LKKRIEDAVVRVETTASSALELEEA-QRIKQ-EEVLRKRNLWDNPAKSHETLSALADAIR 108 Query: 55 AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEAD 113 + +K+++ + + ++ +L+ + L + + ++ Q LL G D Sbjct: 109 VVDHLKDLRFKAEEAKLISQLSEMDAINGELFKQAYKSSVDASEYLDRYQMYKLLKGPYD 168 Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 A + V A + G S+ WA + MYT WA K+ +K +E I+SA + I+ Sbjct: 169 KEGACIIVTAVSNGVTSELWAEKVFGMYTSWARKQGYKVGLIEKIFSTSGHIQSAAMEIE 228 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 +G L GE+G+H+++ S +S+ + S + +D +++ + + D I+T Sbjct: 229 SEYMFGTLSGEKGMHQMIYSSLENSDIDQALSARVDIIPLFLDRPVDLHLDDGD--IETS 286 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 + + +AVR+ H+P+GV + ERS NK +A + L+AKL + + R Sbjct: 287 PSPSVHKKRGRRNGAAVRVQHVPSGVTAESSGERSYFANKLKATSRLKAKLLLVARELRV 346 Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 + E + R Y P+++V DL T I+ + + VL+GD++ F++ + Sbjct: 347 SDVKLINRQAIEDKCNSETRRYTFGPHKLVHDLNTGIQLSDLNSVLEGDIEPFIRGRVTS 406 Query: 354 KK 355 ++ Sbjct: 407 RQ 408 >gi|56755637|gb|AAW25997.1| SJCHGC05491 protein [Schistosoma japonicum] Length = 431 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 88/374 (23%), Positives = 154/374 (41%), Gaps = 43/374 (11%) Query: 14 FD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 FD N + + ++ + L + L + I+E+ L + Sbjct: 42 FDAFKKNTISKYEDISKLMTSGA--GDCDLL-SLSESWKKLRPLVDVIEELDILLEADKE 98 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS------------NDAYL 119 + +L + + +D +LE + + + + + Sbjct: 99 VEQLVADIVGTDAEDDVNDLKALAELEHKQRNILREALEKKLLNLLLPVDQRDLESTVIM 158 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL-------------------EIHDG 160 E+ AGAGG E+ +A+ LL MY A +R + Sbjct: 159 ELFAGAGGKEAGLFAHDLLIMYQALAIQRNWSFNIKQETVMSSEECTPSHNEKSLSYVRV 218 Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220 E G +A I AYG LK E GVHR+ R+ S ++ HTS ++ + P D Sbjct: 219 EIQGEPTAESGILSLGAYGQLKWEAGVHRVQRVPVTSSQNKIHTSTVAVSIQPNYGDVDV 278 Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 S+ D + + +R +G GGQ++N + SAVR+TH+PTG++V CQ+ER QH NK A ML Sbjct: 279 DI-SDDDLKWEFHRPTGPGGQNLNKSTSAVRLTHLPTGIIVSCQRERHQHTNKKHALGML 337 Query: 281 RAKLYELELQKREEIANIGESSK-TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 + KL +++L+ + + + S + +IR+Y P + D R + + Sbjct: 338 KEKLRDIQLKSQLHLIDSIRQSHLGNLDRSEKIRTYNF-PQDRITDHRLGNSWNNLHRFM 396 Query: 340 D---GDLDDFMKAT 350 G L + +++ Sbjct: 397 KQAVG-LSELIESL 409 >gi|323446989|gb|EGB02968.1| hypothetical protein AURANDRAFT_12526 [Aureococcus anophagefferens] Length = 305 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 99/263 (37%), Positives = 138/263 (52%), Gaps = 29/263 (11%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 +EV A AGG E+ +A LL MY R+A +R+ + L + + G+ A +KGP Sbjct: 44 CLVEVKAAAGGDEASLFAGDLLAMYERFAGRRRHGWDLLSVTKSDCGGVSHAYAEVKGPG 103 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV--VDDSIEIEISESDCRIDTYR 234 AYG L+ E GVHR+ R+ D R HTS +S+ V+P D ++ ++ RIDT+R Sbjct: 104 AYGALRFESGVHRVQRVPRNDV--RIHTSTASVVVFPAGAEDRGATVDFDPAELRIDTFR 161 Query: 235 ASGAGGQH------------------VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 ASGAGGQH VNTT+SAVR+TH+PTG VV Q ERSQH+NKA+A Sbjct: 162 ASGAGGQHATTRMEIFNPTSMRAYQNVNTTNSAVRVTHLPTGTVVSIQDERSQHRNKAKA 221 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 +L +++ + A S G G +IR+Y P+ V D R+ Sbjct: 222 LKVLASRVVGAQA--AAAAAARSASRAKLAGSGDRAERIRTYN-APHDRVTDHRSGFTAN 278 Query: 334 SPSDVLDGD-LDDFMKATLAIKK 355 S VL GD LDD + + A + Sbjct: 279 SVDRVLRGDLLDDVVASLEAADR 301 >gi|71008811|ref|XP_758238.1| hypothetical protein UM02091.1 [Ustilago maydis 521] gi|46097913|gb|EAK83146.1| hypothetical protein UM02091.1 [Ustilago maydis 521] Length = 526 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 91/367 (24%), Positives = 162/367 (44%), Gaps = 45/367 (12%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 QRL L + +++ + ++ + LD + + + + ++ Sbjct: 138 EKRQRLLELT----------DGVDSADIGKQLKELDPLRQAWDKFSAKRKQLISTISISQ 187 Query: 78 EEDDCSIL-------QETSDNLQRIKLEVEYKQFESLLSGEADSN-DAYLEVHAGAGGTE 129 + D + + L ++ +++ ES+ A LEV G GG E Sbjct: 188 NDPDEDMRALASEEILLLEEELLELRSDMQELILESVTDPIEAKAVGAVLEVRPGVGGQE 247 Query: 130 SQDWANMLLRMYTRWAEKR--------KFKTEA--------LEIHDGEEAGIKSATLLIK 173 S + + RMY R+ E++ +++ E G +G+K A + +K Sbjct: 248 STLFTAEVARMYQRFCEQKPVEEDGSGEWQVEMLSSTSVDVSTSSSGSGSGLKEAIIEVK 307 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE---ISESDCRI 230 G + LK E GVHR+ RI S + TS ++ V P+ + S + D ++ Sbjct: 308 GKGVFKKLKYEAGVHRVQRIPSTQSLGKLQTSTIAVMVLPISEGSEHKADDLVDPKDVKV 367 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 + R+ GAGGQHVN T+SA+R+TH PTG+ V Q RSQH+N+ +AW +LRA+L + L+ Sbjct: 368 EVMRSRGAGGQHVNKTESAIRLTHEPTGISVSMQDSRSQHQNRTKAWAVLRARLLDRRLK 427 Query: 291 KREEIANIGE-SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD------L 343 + E + + ++R+Y P V D R N+ +++G+ L Sbjct: 428 QEVEGNRERRLAQVASMDRSDRVRTYNF-PQDRVTDHRINLSLNGIDAIMEGEHDPGTGL 486 Query: 344 DDFMKAT 350 D M++ Sbjct: 487 DYIMESL 493 >gi|323964710|gb|EGB60181.1| peptide chain release [Escherichia coli M863] Length = 160 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 63/152 (41%), Positives = 98/152 (64%), Gaps = 6/152 (3%) Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 ++ V P + D+ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ E Sbjct: 1 MTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDE 60 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMV 323 RSQHKNKA+A ++L A+++ E+ KR++ + + +G G + R+Y P V Sbjct: 61 RSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDRNRTYNF-PQGRV 117 Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 D R N+ +V++G LD ++ + + Sbjct: 118 TDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 149 >gi|62719461|gb|AAX93331.1| peptide chain release factor 2 [Lactobacillus sanfranciscensis] Length = 156 Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats. Identities = 84/156 (53%), Positives = 108/156 (69%), Gaps = 1/156 (0%) Query: 178 YGWLKGEQGV-HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 YG+LK +G LVR+SP+DS RRHTS +S+ V P +D++ +I+ D RID +R+S Sbjct: 1 YGYLKIRKGEFIGLVRLSPFDSAGRRHTSLASVNVMPELDENANGDINPDDLRIDVFRSS 60 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 GAGGQH+N T SAVRITH+PTG+V Q +RSQ +N+ A NML++KLYELE +K+ E Sbjct: 61 GAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQLQNRVTAMNMLKSKLYELEEEKKAEEK 120 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332 E + EIGWG QIRSYV PY MVKD T E Sbjct: 121 AKIEGKQLEIGWGSQIRSYVFHPYTMVKDHGTGHET 156 >gi|332027664|gb|EGI67732.1| Peptide chain release factor 1-like, mitochondrial [Acromyrmex echinatior] Length = 406 Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats. Identities = 89/292 (30%), Positives = 150/292 (51%), Gaps = 8/292 (2%) Query: 57 SFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL---SGEAD 113 S E + + L L ++ + L + L + +L ++ ++ + Sbjct: 88 SLFNERIQLVENIQNLHNLGQQDIEIKKLADEETMLYKEQLNELDERLLHMILTNMCKDF 147 Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 ++ +E+ AG GG E+ + L MY +A+ E ++I + GI+ +++I Sbjct: 148 YSNIIIEITAGVGGQEAMLFVKDLYDMYIDYAKCLDLDHEVIDIEMTDNKGIRHVSIMIS 207 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G + E GVHR+ R+ + + R HTS +S+ + P V I+I I+E+D +I+T Sbjct: 208 GDQVDK-FQHEGGVHRVQRVPATEKSGRVHTSTASVAILP-VPSEIQIMINENDLKIETK 265 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 R+SGAGGQHVNTTDSAVRITH+P+G+ V CQ +RSQ++NK A + LR+ LYE +L K+ Sbjct: 266 RSSGAGGQHVNTTDSAVRITHLPSGLSVTCQVDRSQNRNKKIAMDKLRSILYEQQLNKQT 325 Query: 294 EIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIE-KTSPSDVLDGDL 343 + + +G +IR+Y V D R + + + G + Sbjct: 326 SFTSKLRQKQMGMGFRNEKIRTYNYN-QNRVTDHRLGQNGTFNLIEFMQGGI 376 >gi|71000757|ref|XP_755060.1| mitochondrial translation release factor (RF-1) [Aspergillus fumigatus Af293] gi|66852697|gb|EAL93022.1| mitochondrial translation release factor (RF-1), putative [Aspergillus fumigatus Af293] gi|159128074|gb|EDP53189.1| mitochondrial translation release factor (RF-1), putative [Aspergillus fumigatus A1163] Length = 256 Score = 122 bits (306), Expect = 8e-26, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 102/208 (49%), Gaps = 21/208 (10%) Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP------------ 213 A + I AY L+ E GVHR+ R+ ++ R HTS S+ V P Sbjct: 30 SEAVVEIDADGAYDLLRTESGVHRVQRVPATETKGRTHTSAVSVMVLPSFPEAGPSMDSA 89 Query: 214 --VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 D + + + + R + RASGAGGQHVN T+SA+R+THIPTG+VV Q RSQH Sbjct: 90 LNFDDPNSDYYVDPQEVRTEKMRASGAGGQHVNKTESAIRLTHIPTGIVVSMQDSRSQHA 149 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRSYVLQPYQMVKDLR 327 N+ +AW +LRAKL E + RE+ +G G +IR+Y D R Sbjct: 150 NRKKAWQVLRAKLAEARQEAREQELVELRRGVLGGVARMGRGDKIRTYNYG-QSRCTDHR 208 Query: 328 TNIEKTSPSDVLDGD--LDDFMKATLAI 353 + I + +VLDG L+ M + Sbjct: 209 SGITVHNLDNVLDGGESLETIMDSVRTW 236 >gi|265991893|ref|ZP_06104450.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str. Rev.1] gi|263002901|gb|EEZ15252.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str. Rev.1] Length = 133 Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 57/126 (45%), Positives = 85/126 (67%), Gaps = 7/126 (5%) Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASGAGGQHVNTTDSAVRITHIPTG++V Q E+SQH+N+A+A +LRA+LY++E QK Sbjct: 1 MRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK- 58 Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 + ++ ++++G G +IR+Y P V D R N+ V++G+LD+ + A Sbjct: 59 -AESERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGELDELVDA 116 Query: 350 TLAIKK 355 ++ + Sbjct: 117 LISDHQ 122 >gi|119493428|ref|XP_001263904.1| mitochondrial peptide chain release factor [Neosartorya fischeri NRRL 181] gi|119412064|gb|EAW22007.1| mitochondrial peptide chain release factor [Neosartorya fischeri NRRL 181] Length = 256 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 101/208 (48%), Gaps = 21/208 (10%) Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP------------ 213 A + I AY L+ E GVHR+ R+ ++ R HTS S+ V P Sbjct: 30 SEAVVEIDADGAYDLLRTESGVHRVQRVPATETKGRTHTSAVSVMVLPSFPEAGASMDSA 89 Query: 214 --VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 D + + + R + RASGAGGQHVN T+SA+R+THIPTG+VV Q RSQH Sbjct: 90 LNFDDPDSDYYVDPQEVRTEKMRASGAGGQHVNKTESAIRLTHIPTGIVVSMQDSRSQHA 149 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRSYVLQPYQMVKDLR 327 N+ +AW +LRAKL E + RE+ +G G +IR+Y D R Sbjct: 150 NRKKAWQVLRAKLAEARQEAREQELVELRRGVLGGVARMGRGDKIRTYNYG-QSRCTDHR 208 Query: 328 TNIEKTSPSDVLDGD--LDDFMKATLAI 353 + I + +VLDG L+ M + Sbjct: 209 SGITVHNLDNVLDGGESLETIMDSVRTW 236 >gi|17542784|ref|NP_500737.1| hypothetical protein W03F8.3 [Caenorhabditis elegans] gi|6093954|sp|O44568|RF1M_CAEEL RecName: Full=Probable peptide chain release factor 1, mitochondrial; Short=MRF-1; Short=MtRF-1; Flags: Precursor gi|2736385|gb|AAB94190.1| Hypothetical protein W03F8.3 [Caenorhabditis elegans] Length = 389 Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats. Identities = 86/314 (27%), Positives = 148/314 (47%), Gaps = 15/314 (4%) Query: 42 AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101 + + ++ + + S + +++ + D E+ + E + + +L V Sbjct: 67 WESISKQSAKVSDGRSELSQLRTIINDPKETEEMRKLAEVDVESIEENLETELQELAV-- 124 Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 L+ + +E+ GAGG E+ + LL MY + A +K + L++ + Sbjct: 125 --KIVPLNNLDVLSKCQIELSCGAGGQEAMLFTGELLDMYQKLAAVNSWKWDPLQVDNVP 182 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 G++SA + + G Y ++ E GVHR+ R+ DS R HTS +SI V P ++ + Sbjct: 183 LGGVRSALIAVSGEKVYAKMRFEAGVHRVQRVPVNDS--RMHTSTASISVLPEPEEVSVV 240 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 S+S +I+ RASG GGQ+VN +AVR+TH TG+ V C ER QH N A+ L Sbjct: 241 VPSDSV-KIEAMRASGPGGQNVNKRSTAVRMTHKETGIAVHCMDERFQHLNIQIAYKRLA 299 Query: 282 AKLYELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 A L + ++ E I K ++G +IR+Y Q + V D R + T ++ Sbjct: 300 AILMQKQVDAMLE--KIVSKRKLQVGSKARAEKIRTYNFQ-HDRVTDHRIQMSITGVAEF 356 Query: 339 L-DGD-LDDFMKAT 350 L G+ L ++ Sbjct: 357 LSAGETLQTMIERL 370 >gi|237830659|ref|XP_002364627.1| peptide chain release factor 1, putative [Toxoplasma gondii ME49] gi|211962291|gb|EEA97486.1| peptide chain release factor 1, putative [Toxoplasma gondii ME49] gi|221507504|gb|EEE33108.1| peptide chain release factor, putative [Toxoplasma gondii VEG] Length = 545 Score = 121 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 80/255 (31%), Positives = 135/255 (52%), Gaps = 3/255 (1%) Query: 88 TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 + + + F+ +A DA LE+ AG GG ++ ++ LL MY ++ Sbjct: 250 KEKKNAQEEKRDKSMIFDPENDEQALQGDAVLEIQAGVGGEDAALFSRDLLGMYEAFSLA 309 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 R + L+I + E+ G + A+ ++GP+A+ L E G+HR+ R+ P ++ R TS + Sbjct: 310 RGWVFRVLDIQETEKGGYRRASAQVEGPDAFRLLSLEAGIHRVQRVPPTEARGRMQTSAT 369 Query: 208 SIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 ++ V P + +I++S +ID RASG GGQ VN +++AVRITH PTGV V C + Sbjct: 370 AVTVLPRSGNLEDKIDLSPPTLKIDFMRASGPGGQSVNKSETAVRITHKPTGVSVHCMRT 429 Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIG-ESSKTEIGWGRQIRSYVLQPYQMVKD 325 +SQ +NK+ A +LRA+L + +++ E ++ K +IR+Y Q +V D Sbjct: 430 QSQMENKSLALELLRAQLLQQLMRQASEERGRALDAQKGSKDRSEKIRTYNFQ-RDVVTD 488 Query: 326 LRTNIEKTSPSDVLD 340 R + + LD Sbjct: 489 HRCRMHVNGVEEFLD 503 >gi|308454222|ref|XP_003089760.1| hypothetical protein CRE_07913 [Caenorhabditis remanei] gi|308269005|gb|EFP12958.1| hypothetical protein CRE_07913 [Caenorhabditis remanei] Length = 390 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 89/342 (26%), Positives = 153/342 (44%), Gaps = 20/342 (5%) Query: 16 WDNAVQRLSFLNT--KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 ++RL + P + + ++ + + S + ++ + D Sbjct: 43 LKTVIERLKECQEGNASAAPEQIS---YWEAIAKQASIVSDTRSELSQLNSIINDLKETE 99 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E+ + + + + +L L+ + +E+ +GAGG E+ + Sbjct: 100 EMRKLAEGDVESIKETLESELQELATRV----VPLNNLDVLSKCQIELSSGAGGQEAMLF 155 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 LL MY + A +K + L++ + G++SA + + G N Y ++ E GVHR+ R+ Sbjct: 156 TGELLDMYQKLAASNSWKWDPLQVDNVPLGGVRSALIAVSGENVYAKMRFEAGVHRVQRV 215 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 DS R HTS SSI V P ++ + S+S +I+ RASG GGQ+VN +AVR+T Sbjct: 216 PVNDS--RMHTSTSSISVLPEPEEVSVVVPSDSV-KIEAMRASGPGGQNVNKRSTAVRMT 272 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WGR 310 H TG+ V C ER QH N A+ L A L + ++ E I K ++G Sbjct: 273 HKETGIAVHCMDERFQHLNIQIAYKRLAAILMQRQVDAMLE--KIVSRRKLQVGSKARAE 330 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGD-LDDFMKAT 350 +IR+Y Q + V D R + T ++ L G+ L + Sbjct: 331 KIRTYNFQ-HDKVTDHRIQMAITGVNEFLSAGETLHAMIDRL 371 >gi|315254829|gb|EFU34797.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 85-1] Length = 155 Score = 120 bits (301), Expect = 3e-25, Method: Composition-based stats. Identities = 62/147 (42%), Positives = 95/147 (64%), Gaps = 6/147 (4%) Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 P + D+ +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHK Sbjct: 1 MPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHK 60 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT 328 NKA+A ++L A+++ E+ KR++ + + +G G + R+Y P V D R Sbjct: 61 NKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRI 117 Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIKK 355 N+ +V++G LD ++ + + Sbjct: 118 NLTLYRLDEVMEGKLDMLIEPIIQEHQ 144 >gi|145627801|ref|ZP_01783602.1| peptide chain release factor 2 [Haemophilus influenzae 22.1-21] gi|144979576|gb|EDJ89235.1| peptide chain release factor 2 [Haemophilus influenzae 22.1-21] Length = 174 Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats. Identities = 71/165 (43%), Positives = 105/165 (63%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 L C GG+FD+D V+RL +N + E P +W +A+ L +ER L+ ++ IK ++ L Sbjct: 7 LQCFGGIFDFDAKVERLEEVNAELEQPDVWNAPDKAQALGKERVSLEQVVNTIKNLEQGL 66 Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 D LLELA+E +D E L ++ ++E +F + GE D+ D Y+++ AG+G Sbjct: 67 EDVDGLLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFGGEHDACDCYVDLQAGSG 126 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 GTE+QDW MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ Sbjct: 127 GTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIK 171 >gi|163803524|ref|ZP_02197393.1| protein chain release factor B [Vibrio sp. AND4] gi|159172659|gb|EDP57512.1| protein chain release factor B [Vibrio sp. AND4] Length = 103 Score = 119 bits (298), Expect = 6e-25, Method: Composition-based stats. Identities = 58/101 (57%), Positives = 72/101 (71%), Gaps = 1/101 (0%) Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 +TH+PT VVQCQ +RSQHKNK QA LRAKL+ELELQK+ E +K++IGWG Q Sbjct: 1 MTHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQ 60 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 IRSYVL +KDLRT +E + VLDGDLD F++A+L Sbjct: 61 IRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKFIEASLK 100 >gi|121704606|ref|XP_001270566.1| mitochondrial peptide chain release factor [Aspergillus clavatus NRRL 1] gi|119398712|gb|EAW09140.1| mitochondrial peptide chain release factor [Aspergillus clavatus NRRL 1] Length = 251 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 100/208 (48%), Gaps = 21/208 (10%) Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP------------ 213 A + I AY L+ E GVHR+ R+ ++ R HTS S+ V P Sbjct: 30 SEAVIEIDAGGAYDLLRTESGVHRVQRVPATETKGRTHTSAVSVMVLPSFPDTATGAEGA 89 Query: 214 --VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 D + + I + R + RASGAGGQHVN T+SA+R+THIPTG VV Q RSQH Sbjct: 90 LNFDDPNSDYYIDPQEVRTEKMRASGAGGQHVNKTESAIRLTHIPTGTVVSMQDSRSQHA 149 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRSYVLQPYQMVKDLR 327 N+ +AW +LRAKL E + RE+ +G G +IR+Y D R Sbjct: 150 NRKKAWQVLRAKLAEARQESREQELVELRRGVLGGVARMGRGDKIRTYNYG-QSRCTDHR 208 Query: 328 TNIEKTSPSDVLDG--DLDDFMKATLAI 353 + I + D+L G LD M + Sbjct: 209 SGITVHNLDDILGGGQGLDTVMDSVRTW 236 >gi|268552039|ref|XP_002634002.1| Hypothetical protein CBG20109 [Caenorhabditis briggsae] gi|187023852|emb|CAP37210.1| hypothetical protein CBG_20109 [Caenorhabditis briggsae AF16] Length = 389 Score = 119 bits (298), Expect = 7e-25, Method: Composition-based stats. Identities = 82/301 (27%), Positives = 139/301 (46%), Gaps = 13/301 (4%) Query: 42 AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101 + + ++ + + + ++ + D E+ + + + +L Sbjct: 67 WEAIAKQSSVVSDTRFELAQLNSIIKDPNETEEMRKLAEADVESLKETLETGLKELAARV 126 Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 L+ + +E+ +GAGG E+ + LL MY + A +K + L++ Sbjct: 127 ----VPLTNLDVLSKCQIELSSGAGGQEAMLFTGELLDMYQKLAATNSWKWDPLQVDSVP 182 Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 G++SA + + G N Y ++ E GVHR+ R+ DS R HTS +SI V P ++ + Sbjct: 183 LGGVRSALIAVSGENVYSKMRFEAGVHRVQRVPVNDS--RMHTSTASISVLPEPEEVSVV 240 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 S+S +I+ RASG GGQ+VN +AVR+TH TG+ V C ER QH N A+ L Sbjct: 241 VPSDSV-KIEAMRASGPGGQNVNKRSTAVRMTHKETGIAVHCMDERFQHLNIQIAYKRLA 299 Query: 282 AKLYELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338 A L + ++ E I K ++G +IR+Y Q + V D R + T + Sbjct: 300 AILMQRQVDAMLE--KIVSRRKLQVGSKARAEKIRTYNFQ-HDKVTDHRIGMAITGVEEF 356 Query: 339 L 339 L Sbjct: 357 L 357 >gi|297604413|ref|NP_001055378.2| Os05g0375600 [Oryza sativa Japonica Group] gi|255676317|dbj|BAF17292.2| Os05g0375600 [Oryza sativa Japonica Group] Length = 407 Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats. Identities = 68/321 (21%), Positives = 133/321 (41%), Gaps = 10/321 (3%) Query: 34 HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93 +LW N ++ + + +K+++ + + ++ +L+ + L + + Sbjct: 95 NLWDNPAKSHETLSALADAIRVVDHLKDLRYKAEEAKLISQLSEMDVINVELFKQAYKTS 154 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 E + L + + + MY+ WA K+ K Sbjct: 155 VDATEFLDRYQMYKLLKGPYDKEGACIIVTAGSD-------ERIFCMYSSWARKQGCKDG 207 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 +E + +A + I+ +G L GE+G HR++ S ++ + TS + Sbjct: 208 LVEKITSTSGRVWTAAIEIESEYMFGTLTGEKGTHRMIYPSVDNAGTYEATSARVDIIPL 267 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +D + + + E+D I + H N SA+R+ HI TGV + ERS NK Sbjct: 268 FLDRPVNLHLDENDLEISPSPSDHKRRDHRN---SAIRVQHIRTGVTAESSGERSYFANK 324 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333 +A + L+AKL + + R + E + R+ R Y P ++V DL T ++ + Sbjct: 325 MKAISRLKAKLLVISRELRSSNLKTIKRQTVEELYSRETRRYKFGPQKLVHDLNTGLQLS 384 Query: 334 SPSDVLDGDLDDFMKATLAIK 354 + VLDGD+D F++ + + Sbjct: 385 ELNSVLDGDIDPFIRGRIVSR 405 >gi|308478247|ref|XP_003101335.1| hypothetical protein CRE_13471 [Caenorhabditis remanei] gi|308263236|gb|EFP07189.1| hypothetical protein CRE_13471 [Caenorhabditis remanei] Length = 390 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 89/342 (26%), Positives = 151/342 (44%), Gaps = 20/342 (5%) Query: 16 WDNAVQRLSFLNT--KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 ++RL + P + + ++ + + S + ++ + D Sbjct: 43 LKTVIERLKECQEGNASAAPEQIS---YWEAIAKQAAIVSDTRSELFQLNSIINDLKETE 99 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E+ + + + + L L+ + +E+ +GAGG E+ + Sbjct: 100 EMRKLAEGDVESIKETLESELQVLATRV----VPLNNLDVLSKCQIELSSGAGGQEAMLF 155 Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 LL MY + A +K + L++ + G++SA + + G N Y ++ E GVHR+ R+ Sbjct: 156 TGELLDMYQKLAASNSWKWDPLQVDNVPLGGVRSALIAVSGENVYAKMRFEAGVHRVQRV 215 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 DS R HTS SSI V P ++ + S+S +I+ RASG GGQ+VN +AVR+T Sbjct: 216 PVNDS--RMHTSTSSISVLPEPEEVSVVVPSDSV-KIEAMRASGPGGQNVNKRSTAVRMT 272 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WGR 310 H TG+ V C ER QH N A+ L A L + ++ E I K ++G Sbjct: 273 HKETGIAVHCMDERFQHLNIQIAYKRLAAILMQRQVDAMLE--KIVSRRKLQVGSKARAE 330 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGD-LDDFMKAT 350 +IR+Y Q + V D R + T + L G+ L + Sbjct: 331 KIRTYNFQ-HDKVTDHRIQMAITGVDEFLSAGETLHAMIDRL 371 >gi|331674376|ref|ZP_08375136.1| peptide chain release factor 2 (RF-2) [Escherichia coli TA280] gi|331068470|gb|EGI39865.1| peptide chain release factor 2 (RF-2) [Escherichia coli TA280] Length = 184 Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats. Identities = 91/184 (49%), Positives = 117/184 (63%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 E P +W A+ L +ER L+ + + +++ L D LLELA+E DD E Sbjct: 1 MEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEADDEETFNEAV 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 L ++ ++ +F + SGE DS D YL++ AG+GGTE+QDWA+ML RMY RWAE R Sbjct: 61 AELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRG 120 Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 FKTE +E +GE AGIKS T+ I G AYGWL+ E GVHRLVR SP+DS RRHTSFSS Sbjct: 121 FKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSA 180 Query: 210 WVYP 213 YP Sbjct: 181 VCYP 184 >gi|242021553|ref|XP_002431209.1| peptide chain release factor, putative [Pediculus humanus corporis] gi|212516458|gb|EEB18471.1| peptide chain release factor, putative [Pediculus humanus corporis] Length = 413 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 68/285 (23%), Positives = 122/285 (42%), Gaps = 9/285 (3%) Query: 67 CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 + L + +E + + ++ + + + + G Sbjct: 76 DNFLEKKYIEEIRHSIDKKKEIECEILALNTVNSEEKILPHNFDGGEESQIEIHIFPAVG 135 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186 G E++ +A L MY + + + EI + G L ++G Y L E G Sbjct: 136 GEEAKYFAEELFNMYVNYIIYKNWNCIRAEIKQDTKVGH----LTLQGNTIYNSLICEAG 191 Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 VHR+ R+ + R HTS S+ ++ + EI I+ D I+T R+ G GGQ+VN Sbjct: 192 VHRVQRVPETEKFGRTHTSTCSLNIF-QKSLNNEIIINPKDIIIETLRSGGPGGQNVNKV 250 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-GESSKTE 305 ++ VRI HIPTG++++ Q+ R Q++NK +A+ L++ L + K + Sbjct: 251 ETRVRIKHIPTGLIIESQESRYQYENKIKAFKKLQSTLLNMYEDKINSSKKATLKDQTGN 310 Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMK 348 + +IR+Y + D R N + L G +LDD ++ Sbjct: 311 NDYSDKIRTYNFN-QNRITDHRINYSLYNMDAFLSGGKELDDMIE 354 >gi|253795640|ref|YP_003038736.1| putative peptide chain release factor RF1 [Candidatus Hodgkinia cicadicola Dsem] gi|253739948|gb|ACT34283.1| putative peptide chain release factor RF1 [Candidatus Hodgkinia cicadicola Dsem] Length = 240 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 89/233 (38%), Positives = 128/233 (54%), Gaps = 3/233 (1%) Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177 LE+ AG GG E+ +A+ LLRMY R+A K +++ E+ G + GIK A + G Sbjct: 1 MLELRAGVGGREAGLFASQLLRMYERFAAKMRWRVTLTEVSFGCDGGIKRAVADVVGEGV 60 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 WL E GVHR+ R+ ++ R HTS ++ + P S E+ + SD +I+T RASG Sbjct: 61 GLWLAHEAGVHRVQRVPKTETRGRVHTSTVTLALLPSAGASCELGLLNSDLKIETMRASG 120 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 AGGQHVNTTDSAVRITH+PTGV C RSQH+N+A A +LR ++ L A Sbjct: 121 AGGQHVNTTDSAVRITHLPTGV-TACASCRSQHQNRAMALKLLRERVAARALSNAAADAA 179 Query: 298 IGESSK-TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 +++ + + R+Y V D + + VLDG+L ++A Sbjct: 180 GVRAAQVADGARAHRARTYSFV-MDKVTDHKLGRSVVGVARVLDGELQLLVRA 231 >gi|30694592|ref|NP_191278.2| peptide chain release factor, putative [Arabidopsis thaliana] gi|332646104|gb|AEE79625.1| putative peptide chain release factor [Arabidopsis thaliana] Length = 406 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 79/325 (24%), Positives = 155/325 (47%), Gaps = 13/325 (4%) Query: 34 HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93 LW + ++ ++ + A+ +K+++ + + ++++L + L E + + Sbjct: 87 DLWDDPAKSDEILLKLADRAKAVDSLKDLKYKAEEAKLIIQLGEMDAIDYSLFEQAYDSS 146 Query: 94 RIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 + + LL + D+ A + + +G+ G +SQ W ++ MY +WAE+ Sbjct: 147 LDVSRSLHHYEMSKLLRDQYDAEGACMIIKSGSPGAKSQIWTEQVVSMYIKWAERLGQNA 206 Query: 153 EALEIHD--GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 E ++G+ SAT+ + AYG+L GE+GVHRL+ S S S + Sbjct: 207 RVAEKCSLLSNKSGVSSATIEFEFEFAYGYLLGERGVHRLI----ISSTSNEECSATVDI 262 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + + S + E+ E D + S + ++ V I HIP+GV +Q ER++ Sbjct: 263 IPLFLRASPDFEVKEGDLIV-----SYPAKEDHKIAENMVCIHHIPSGVTLQSSGERNRF 317 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 N+ +A N L+AKL + +++ N SK + + RSYV + ++MV D +T + Sbjct: 318 ANRIKALNRLKAKLLVIAKEQKVSDVNKI-DSKNILEPREETRSYVSKGHKMVVDRKTGL 376 Query: 331 EKTSPSDVLDGDLDDFMKATLAIKK 355 E VLDG++ + A +++++ Sbjct: 377 EILDLKSVLDGNIGPLLGAHISMRR 401 >gi|213580224|ref|ZP_03362050.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 209 Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats. Identities = 128/207 (61%), Positives = 153/207 (73%) Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ A Sbjct: 3 QGLDDVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQA 62 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTE+QDWA+MLLRMY RWAE R FKTE +E +GE AGIKSAT+ I G AYGWL+ Sbjct: 63 GSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLRT 122 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHV Sbjct: 123 ETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHV 182 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQH 270 N T+SAVRITHIPTG+V QCQ +RSQH Sbjct: 183 NRTESAVRITHIPTGIVTQCQNDRSQH 209 >gi|156094764|ref|XP_001613418.1| peptide chain release factor [Plasmodium vivax SaI-1] gi|148802292|gb|EDL43691.1| peptide chain release factor, putative [Plasmodium vivax] Length = 334 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 85/275 (30%), Positives = 132/275 (48%), Gaps = 34/275 (12%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH---DGEEAGI 165 + N L + +G GGTE+ D+ +ML MY ++ K K K E GI Sbjct: 57 YSKYFKNSCSLILSSGTGGTEACDFCSMLYNMYMKYLSKLKNKKNIKYEVIDLSKNEVGI 116 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS- 224 K + I G ++ E+G+HR+VR SP+++ +++ TSF + V P + + I+ Sbjct: 117 KKVEIKIDGEYSFYNFVSEKGIHRMVRNSPFNAQNKKMTSFVKVDVIPTLSYNDTNVINF 176 Query: 225 ----------------------------ESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +SD I T R+ G GGQ+VN ++AVRI H P Sbjct: 177 LNIAESSSPSVKKNMNSRNINVNEIALNKSDLVIQTMRSGGKGGQNVNKVETAVRILHKP 236 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316 T + V+ ERSQ NK A + KL L+L+ + S+K+ +G QIR+Y+ Sbjct: 237 TNISVKVSSERSQILNKRIALKTIYEKLLYLQLE-ALKNKKYEFSNKSLTHFGEQIRNYI 295 Query: 317 LQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKAT 350 L +M+KD RTN+ T VL G+++ F+ A Sbjct: 296 LYGNKMIKDTRTNVSSTDVDRVLSQGEIELFVDAY 330 >gi|281414235|ref|ZP_06245977.1| peptide chain release factor 2 [Micrococcus luteus NCTC 2665] Length = 129 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 53/120 (44%), Positives = 74/120 (61%), Gaps = 1/120 (0%) Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 +SG Q V SAVR+TH+PTG+VV Q E+SQ +N+A A +L+++L L + + Sbjct: 1 SSGPASQSVGAPHSAVRMTHLPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLLRKAEEDA 60 Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + WG Q+RSYVL PYQMVKDLRT E+ +PS V DG +DDF+ A + + Sbjct: 61 KKKEMAGD-VKASWGDQMRSYVLNPYQMVKDLRTGHEEGNPSSVFDGHIDDFVDAGIRWR 119 >gi|22135990|gb|AAM91577.1| putative protein [Arabidopsis thaliana] gi|30725574|gb|AAP37809.1| At3g57190 [Arabidopsis thaliana] Length = 372 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 79/325 (24%), Positives = 155/325 (47%), Gaps = 13/325 (4%) Query: 34 HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93 LW + ++ ++ + A+ +K+++ + + ++++L + L E + + Sbjct: 53 DLWDDPAKSDEILLKLADRAKAVDSLKDLKYKAEEAKLIIQLGEMDAIDYSLFEQAYDSS 112 Query: 94 RIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152 + + LL + D+ A + + +G+ G +SQ W ++ MY +WAE+ Sbjct: 113 LDVSRSLHHYEMSKLLRDQYDAEGACMIIKSGSPGAKSQIWTEQVVSMYIKWAERLGQNA 172 Query: 153 EALEIHD--GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210 E ++G+ SAT+ + AYG+L GE+GVHRL+ S S S + Sbjct: 173 RVAEKCSLLSNKSGVSSATIEFEFEFAYGYLLGERGVHRLI----ISSTSNEECSATVDI 228 Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + + S + E+ E D + S + ++ V I HIP+GV +Q ER++ Sbjct: 229 IPLFLRASPDFEVKEGDLIV-----SYPAKEDHKIAENMVCIHHIPSGVTLQSSGERNRF 283 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 N+ +A N L+AKL + +++ N SK + + RSYV + ++MV D +T + Sbjct: 284 ANRIKALNRLKAKLLVIAKEQKVSDVNKI-DSKNILEPREETRSYVSKGHKMVVDRKTGL 342 Query: 331 EKTSPSDVLDGDLDDFMKATLAIKK 355 E VLDG++ + A +++++ Sbjct: 343 EILDLKSVLDGNIGPLLGAHISMRR 367 >gi|322499707|emb|CBZ34781.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 439 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 75/304 (24%), Positives = 143/304 (47%), Gaps = 11/304 (3%) Query: 42 AKMLMRERQHLDNAISFIKEIQDR-LCDNLILLELALEEDDCSILQETSDNLQRIKLEVE 100 A+ + + LD ++ ++Q + + + ++D + L + L+ V Sbjct: 105 AEKVCAVLRQLDENVTLHDQLQSKSVRSREDEEIFDMAKEDIATLTDQLRVLEGEVNAVM 164 Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW-AEKRKFKTEALEIHD 159 ++ S + +N + V AGG E+ +A L MY + E R +K + D Sbjct: 165 ERRIGSDDLVGSVTNVWNINVEGKAGGEEASLFAAELAEMYRMYATEFRNWKVRPVVKDD 224 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 G EA S + G Y ++ E GVH++ R+ D+ + TS + + P V D + Sbjct: 225 GSEA-ANSNEFQVCGEGVYRNMRHEIGVHKVQRVPVTDAAGKMQTSTAVFTMMP-VLDPV 282 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 +++ ESDC+ID R SG GGQ + ++ + V +TH P+G+ V+C Q RS NK A Sbjct: 283 SVDVHESDCKIDFVRGSGPGGQGMQSSSNCVVLTHKPSGISVKCHQSRSALGNKELALQT 342 Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPS 336 + ++ L + +E+ +++ ++ + + G + +R+Y P V D R + + S Sbjct: 343 VAQQI--LVQRVKEQNSSLHKAWQNQWSSGERSDKMRTYNY-PQNRVTDHRIG-KDYALS 398 Query: 337 DVLD 340 ++ Sbjct: 399 SFME 402 >gi|146088922|ref|XP_001466182.1| peptide chain release factor-like protein [Leishmania infantum JPCM5] gi|134070284|emb|CAM68621.1| peptide chain release factor-like protein [Leishmania infantum JPCM5] Length = 439 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 75/304 (24%), Positives = 143/304 (47%), Gaps = 11/304 (3%) Query: 42 AKMLMRERQHLDNAISFIKEIQDR-LCDNLILLELALEEDDCSILQETSDNLQRIKLEVE 100 A+ + + LD ++ ++Q + + + ++D + L + L+ V Sbjct: 105 AEKVCAVLRQLDENVTLHDQLQSKSVRSREDEEIFDMAKEDIATLTDQLRVLEGEVNAVM 164 Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW-AEKRKFKTEALEIHD 159 ++ S + +N + V AGG E+ +A L MY + E R +K + D Sbjct: 165 ERRIGSDDLVGSVTNVWNINVEGKAGGEEASLFAAELAEMYRMYATEFRNWKVRPVVKDD 224 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 G EA S + G Y ++ E GVH++ R+ D+ + TS + + P V D + Sbjct: 225 GSEA-ANSNEFQVCGEGVYRNMRHEIGVHKVQRVPVTDAAGKMQTSTAVFTMMP-VLDPV 282 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 +++ ESDC+ID R SG GGQ + ++ + V +TH P+G+ V+C Q RS NK A Sbjct: 283 SVDVHESDCKIDFVRGSGPGGQGMQSSSNCVVLTHKPSGISVKCHQSRSALGNKELALQT 342 Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPS 336 + ++ L + +E+ +++ ++ + + G + +R+Y P V D R + + S Sbjct: 343 VAQQI--LVQRVKEQNSSLHKAWQNQWSSGERSDKMRTYNY-PQNRVTDHRIG-KDYALS 398 Query: 337 DVLD 340 ++ Sbjct: 399 SFME 402 >gi|307176123|gb|EFN65821.1| Peptide chain release factor 1-like, mitochondrial [Camponotus floridanus] Length = 412 Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats. Identities = 94/335 (28%), Positives = 162/335 (48%), Gaps = 22/335 (6%) Query: 16 WDNAVQRL-----SFLNTKTEDPHLWQ--NVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 ++ ++R + + ++ ++ L+ +R HL + I+ +QD Sbjct: 58 LEDKIRRYLDYVTKEYKNEASKSNFFEFIDLKTVGHLLDDRTHL---VENIQNLQDLAKQ 114 Query: 69 NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 ++ + +LA EE+ Q + + + + E + +E+ AG GG Sbjct: 115 DVEMKKLAKEEETLYKEQLNELDERLLDNILINICKE-------SYDSIIIEITAGVGGQ 167 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 E+ + L MY +A+ E +++ + GI+ ++L+ G Y L+ E GVH Sbjct: 168 EAMLFVKDLYEMYMGYAKYLDLTHEVIDMETNDNNGIRHVSILLSGDETYK-LQYEGGVH 226 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 R+ RI + + R HTS +S+ + P ++I I++ D +I+T RASGAGGQHVNTTDS Sbjct: 227 RVQRIPATERSGRVHTSTASVAILP-TPSKVQIVINDKDLKIETKRASGAGGQHVNTTDS 285 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI-G 307 AVRI ++P+G+ V CQ RSQ KNK A LR+ LYE +L K+ + + + Sbjct: 286 AVRIIYLPSGLSVSCQMHRSQIKNKEVAMIKLRSILYEQQLNKQTTFISELRQKQMGMKS 345 Query: 308 WGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDG 341 ++R+Y V D R N + + + G Sbjct: 346 RNEKVRTYNYN-QDRVTDHRLQNGTMYNLPEFMQG 379 >gi|157870704|ref|XP_001683902.1| peptide chain release factor-like protein [Leishmania major] gi|68126969|emb|CAJ05291.1| peptide chain release factor-like protein [Leishmania major strain Friedlin] Length = 439 Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 77/304 (25%), Positives = 143/304 (47%), Gaps = 11/304 (3%) Query: 42 AKMLMRERQHLDNAISFIKEIQDR-LCDNLILLELALEEDDCSILQETSDNLQRIKLEVE 100 A + + LD + ++Q + L + L + ++D + L L+ V Sbjct: 105 AAKVCAVLRQLDENATLHDQLQSKSLRNREDEEILDMVKEDIATLMNQLRLLEGEVNAVM 164 Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW-AEKRKFKTEALEIHD 159 ++ S + +N + V AGG E+ +A L MY + E R +K + D Sbjct: 165 ERRIGSDDLVGSVTNVWNINVEGKAGGEEASLFAAELAEMYRMYATEFRNWKVRPVVKDD 224 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 G EA S + G Y ++ E GVH++ R+ D+ + TS + + P V D + Sbjct: 225 GSEA-ANSNEFQVCGEGVYRNMRHEIGVHKVQRVPVTDAAGKMQTSTAVFTMMP-VLDPV 282 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 +++ E+DC+ID R SG GGQ + ++ + V +TH P+G+ V+C Q RS NK A M Sbjct: 283 SVDVHENDCKIDFVRGSGPGGQGMQSSSNCVVLTHKPSGISVKCHQSRSALGNKELALQM 342 Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPS 336 + ++ L + +E+ +++ ++ + + G + +R+Y P V D R + + S Sbjct: 343 VAQQI--LAQRVKEQNSSLHKAWQNQWSSGERSDKMRTYN-HPQNRVTDHRLG-KDYALS 398 Query: 337 DVLD 340 ++ Sbjct: 399 SFME 402 >gi|169607138|ref|XP_001796989.1| hypothetical protein SNOG_06624 [Phaeosphaeria nodorum SN15] gi|160707160|gb|EAT86455.2| hypothetical protein SNOG_06624 [Phaeosphaeria nodorum SN15] Length = 294 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 76/252 (30%), Positives = 115/252 (45%), Gaps = 28/252 (11%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + LE+ GAGG+E+ +A L RMY + + F+T L+ Sbjct: 49 VPVHPFAHLPCILEIRPGAGGSEAAIFAGDLFRMYQTFCNRSGFRTSLLKYE------NV 102 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 + T P + + E V S D + + I + Sbjct: 103 NGTTEAGVPLSEAIFEIENADAYGVFRSQED----------------FENPESDYYIDQK 146 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 + +++ RASGAGGQHVN T+SAVR+THIPT VV Q RSQHKNK AW+++R+++ + Sbjct: 147 EIKLEVMRASGAGGQHVNKTESAVRLTHIPTNTVVSMQDSRSQHKNKESAWSLMRSRIAQ 206 Query: 287 LELQKREEIANIGESS---KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD- 342 L +KREE S ++G G ++R+Y Q V D R+ I DV+ G Sbjct: 207 LRREKREEEMVNLRRSVVGVAKMGRGDKVRTYNWG-QQRVTDHRSGITVHDLDDVMGGGQ 265 Query: 343 -LDDFMKATLAI 353 L+ M++ Sbjct: 266 TLEKVMESVRGW 277 >gi|221051906|ref|XP_002257529.1| peptidyl-trna hydrolase [Plasmodium knowlesi strain H] gi|193807359|emb|CAQ37864.1| peptidyl-trna hydrolase, putative [Plasmodium knowlesi strain H] Length = 334 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 84/275 (30%), Positives = 132/275 (48%), Gaps = 34/275 (12%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG---EEAGI 165 + N L + +G GGTE+ D+ +ML MY ++ K K K E GI Sbjct: 57 YSKYFKNSCSLILSSGTGGTEACDFCSMLYNMYMKYLSKLKNKKNIKYEVMDLSKNEVGI 116 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI---- 221 K + I G ++ E+G+HR+VR SP+++ +++ TSF + V P + + Sbjct: 117 KKVEIKIDGEYSFYNFVSEKGIHRMVRNSPFNAQNKKMTSFVKVDVIPTLSYNDTNVINF 176 Query: 222 -------------------------EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 +++SD I T R+ G GGQ+VN ++AVRI H P Sbjct: 177 LNIAESSSTPVKKTLNSRNINVNEIPLNKSDLVIQTMRSGGKGGQNVNKVETAVRILHKP 236 Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316 T + V+ ERSQ NK A + KL L+L+ + S+K+ +G QIR+Y+ Sbjct: 237 TNISVKVSSERSQILNKRIALKTIYEKLLYLQLE-ALKNKKYEFSNKSLTHFGEQIRNYI 295 Query: 317 LQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKAT 350 L +M+KD RTN+ T VL G+++ F+ A Sbjct: 296 LYGNKMIKDTRTNVFSTDVDRVLSQGEIELFVDAY 330 >gi|238506130|ref|XP_002384267.1| mitochondrial translation release factor (RF-1), putative [Aspergillus flavus NRRL3357] gi|220690381|gb|EED46731.1| mitochondrial translation release factor (RF-1), putative [Aspergillus flavus NRRL3357] Length = 267 Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats. Identities = 70/205 (34%), Positives = 105/205 (51%), Gaps = 21/205 (10%) Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP------------ 213 A + ++ AY L+ E GVHR+ R+ ++ R HTS S+ V P Sbjct: 30 NEAVMEVEADGAYEILRTESGVHRVQRVPATETKGRTHTSAVSVMVLPSFPETGGAMDNA 89 Query: 214 --VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271 D + + + + R + RA GAGGQHVN T+SA+R+TH+PTG+VV Q RSQH Sbjct: 90 LNFDDPNSDYYVDPQEVRSEKMRAGGAGGQHVNKTESAIRLTHMPTGIVVSMQDSRSQHA 149 Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRSYVLQPYQMVKDLR 327 N+ +AW +LRA+L E + RE+ +G G +IR+Y D R Sbjct: 150 NRKKAWQILRARLAEARQEAREQKFVELRRGVLGGVARMGRGDKIRTYNYG-QSRCTDHR 208 Query: 328 TNIEKTSPSDVLDG--DLDDFMKAT 350 ++I + +DVLDG L+ M++ Sbjct: 209 SSITIHNLNDVLDGGEGLETVMESF 233 >gi|322492443|emb|CBZ27717.1| peptide chain release factor-like protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 439 Score = 116 bits (289), Expect = 8e-24, Method: Composition-based stats. Identities = 78/304 (25%), Positives = 144/304 (47%), Gaps = 11/304 (3%) Query: 42 AKMLMRERQHLDNAISFIKEIQDR-LCDNLILLELALEEDDCSILQETSDNLQRIKLEVE 100 A+ + + LD ++ ++Q + + L + ++D + L E L+ V Sbjct: 105 AEKVCVVLRQLDENVTLHDQLQSKSVRSREDEEILDMLKEDIATLTEQLRLLEGEVNAVM 164 Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW-AEKRKFKTEALEIHD 159 ++ S + +N + V AGG E+ +A L MY + E R +K + D Sbjct: 165 ERRIGSDDLVGSVTNVWNINVEGKAGGEEASLFAAELAEMYRTYATEFRNWKVRPVVKDD 224 Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 G EA S + G Y + E GVH++ R+ D+ + TS + + P V D + Sbjct: 225 GSEA-ASSNEFQVSGEGVYRNMHHEIGVHKVQRVPVTDAAGKMQTSTAVFTMMP-VLDPV 282 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 +++ ESDC+ID R SG GGQ + ++ + V +TH P+G+ V+C Q RS NK A M Sbjct: 283 SVDVHESDCKIDFVRGSGPGGQGMQSSSNCVVLTHKPSGISVKCHQSRSALGNKELALQM 342 Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPS 336 + ++ L + +E+ +++ ++ + + G + +R+Y P V D R + + S Sbjct: 343 VAQQI--LAQRVKEQNSSLHKAWQNQWSSGERSDKMRTYNY-PQNRVTDHRIG-KDYALS 398 Query: 337 DVLD 340 ++ Sbjct: 399 SFME 402 >gi|73667063|ref|YP_303079.1| class I peptide chain release factor domain-containing protein [Ehrlichia canis str. Jake] gi|72394204|gb|AAZ68481.1| Class I peptide chain release factor domain [Ehrlichia canis str. Jake] Length = 173 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 73/162 (45%), Positives = 105/162 (64%), Gaps = 9/162 (5%) Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 +K E GVHR+ R+ +++ R +TS +++ V P + ++++I E D RID YR+SG GG Sbjct: 1 MKFESGVHRVQRVPETEASGRLYTSAATVAVLP-EIEEVDLKIDEKDLRIDVYRSSGPGG 59 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 Q VNTTDSAVRITHIP+G+VV + E+SQHKNK A +LRA+LY LE QKR+ I + Sbjct: 60 QSVNTTDSAVRITHIPSGIVVIQRDEKSQHKNK--ALKVLRARLYNLEKQKRDSE--ISQ 115 Query: 301 SSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 K++IG G +IR+Y P + D R N+ D++ Sbjct: 116 MRKSQIGSGDRSERIRTYNF-PQSRITDHRINLTLYRLEDIM 156 >gi|301346253|ref|ZP_07226994.1| peptide chain release factor 2 [Acinetobacter baumannii AB056] gi|301513591|ref|ZP_07238828.1| peptide chain release factor 2 [Acinetobacter baumannii AB058] gi|301596660|ref|ZP_07241668.1| peptide chain release factor 2 [Acinetobacter baumannii AB059] Length = 201 Score = 115 bits (288), Expect = 9e-24, Method: Composition-based stats. Identities = 103/199 (51%), Positives = 143/199 (71%) Query: 47 RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106 +E+ L+N I+ + + +L D +L+LA+E DD S+L++ L + E+ +F Sbjct: 3 KEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELSTAEEELAKLEFRR 62 Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + S D N Y+E+ AG+GGTE+QDWA+MLLRMY RW E+ FK E +E+ DG+ AGIK Sbjct: 63 MFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAGIK 122 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SAT+ ++G AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+ S Sbjct: 123 SATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDINPS 182 Query: 227 DCRIDTYRASGAGGQHVNT 245 D R DTYRASGAGGQH+N Sbjct: 183 DVRTDTYRASGAGGQHINK 201 >gi|322801718|gb|EFZ22324.1| hypothetical protein SINV_03599 [Solenopsis invicta] Length = 300 Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats. Identities = 81/231 (35%), Positives = 126/231 (54%), Gaps = 6/231 (2%) Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 + +E+ AG GG E+ + L MY +A+ E +++ + GI+ +++I Sbjct: 41 YDSIIIEITAGVGGQEAMLFVKDLYDMYLGYAKYLDLDHEIIDMEVTDNKGIRHVSVIIS 100 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G + E GVHR+ R+ + SR HTS +S+ + P V I+I I+E D +I+T Sbjct: 101 GNQVDK-FQHEGGVHRVQRVPATERLSRVHTSTASVAILP-VPSEIQIMINEKDLKIETK 158 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 R+SGAGGQHVNTTDSAVRITH+P+GV V C+ RSQ KN+ A + L++ LYE +L K+ Sbjct: 159 RSSGAGGQHVNTTDSAVRITHLPSGVSVTCEVHRSQDKNRKMAMDKLKSVLYERQLNKQT 218 Query: 294 EIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNI--EKTSPSDVLDG 341 + + +G +IR+Y V D R + ++ + G Sbjct: 219 SFTSELRQKQMGMGFRNEKIRTYNYN-QDRVTDHRLGQNGTLYNLAEFMQG 268 >gi|167948500|ref|ZP_02535574.1| peptide chain release factor 2 (programmed frameshift) [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 105 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 60/102 (58%), Positives = 74/102 (72%), Gaps = 1/102 (0%) Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH PTG+VVQCQ +RSQHKNK QA L+AKLYELE+QK+ E E +K++IGW Sbjct: 2 RITHNPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYELEIQKQRETQQAVEDTKSDIGWDS 61 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 QIRSYVL +KDLRTN+E + VLDG LD F++A+L Sbjct: 62 QIRSYVLD-ASRIKDLRTNVETGNTQAVLDGGLDIFIEASLK 102 >gi|88607753|ref|YP_505069.1| peptide chain release factor 2, truncation [Anaplasma phagocytophilum HZ] gi|88598816|gb|ABD44286.1| peptide chain release factor 2, truncated [Anaplasma phagocytophilum HZ] Length = 226 Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats. Identities = 105/216 (48%), Positives = 142/216 (65%), Gaps = 1/216 (0%) Query: 37 QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK 96 + +AK L+ ER + ++ + ++ D L E+ + DD L + LQ +K Sbjct: 3 DDAEKAKSLLSERSRVSAVLTSFRVLEKEHKDLAELAEMISDSDDRDFLATINAELQSLK 62 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE-KRKFKTEAL 155 L + K+ E + S EAD+N +L + +GAGGTES DW MLLRMYT+WAE +F E + Sbjct: 63 LRISQKKTECMFSHEADANSCFLTIRSGAGGTESSDWVCMLLRMYTKWAESFHEFTVETV 122 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 + DGEE G+K+ T+ I G AYGW + E G+HRLVRISP+D ++RHTSF+S+ V PVV Sbjct: 123 DSVDGEETGLKAVTVKICGIGAYGWARTESGIHRLVRISPFDHAAKRHTSFASVEVSPVV 182 Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 D I+I+I E D RIDTYRASGAGGQHVN T+SAVR Sbjct: 183 DHEIDIKILEKDLRIDTYRASGAGGQHVNKTESAVR 218 >gi|6735298|emb|CAB68125.1| putative protein [Arabidopsis thaliana] Length = 409 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 80/328 (24%), Positives = 156/328 (47%), Gaps = 16/328 (4%) Query: 34 HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93 LW + ++ ++ + A+ +K+++ + + ++++L + L E + + Sbjct: 87 DLWDDPAKSDEILLKLADRAKAVDSLKDLKYKAEEAKLIIQLGEMDAIDYSLFEQAYDSS 146 Query: 94 RIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGGTESQD---WANMLLRMYTRWAEKRK 149 + + LL + D+ A + + +G+ G +SQD W ++ MY +WAE+ Sbjct: 147 LDVSRSLHHYEMSKLLRDQYDAEGACMIIKSGSPGAKSQDLQIWTEQVVSMYIKWAERLG 206 Query: 150 FKTEALEIHD--GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 E ++G+ SAT+ + AYG+L GE+GVHRL+ S S S + Sbjct: 207 QNARVAEKCSLLSNKSGVSSATIEFEFEFAYGYLLGERGVHRLI----ISSTSNEECSAT 262 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 + + S + E+ E D + S + ++ V I HIP+GV +Q ER Sbjct: 263 VDIIPLFLRASPDFEVKEGDLIV-----SYPAKEDHKIAENMVCIHHIPSGVTLQSSGER 317 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 ++ N+ +A N L+AKL + +++ N SK + + RSYV + ++MV D + Sbjct: 318 NRFANRIKALNRLKAKLLVIAKEQKVSDVNKI-DSKNILEPREETRSYVSKGHKMVVDRK 376 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIKK 355 T +E VLDG++ + A +++++ Sbjct: 377 TGLEILDLKSVLDGNIGPLLGAHISMRR 404 >gi|82540115|ref|XP_724399.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23479026|gb|EAA15964.1| Peptidyl-tRNA hydrolase domain, putative [Plasmodium yoelii yoelii] Length = 330 Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats. Identities = 87/275 (31%), Positives = 135/275 (49%), Gaps = 32/275 (11%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI---HDGEEAGI 165 + N L + +G GGTE+ D+ NML MY ++ K K K E GI Sbjct: 55 YSKYFKNSCSLILSSGTGGTEACDFCNMLYNMYMKYLGKIKNKKNIKYEVIDISKNEIGI 114 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS- 224 K + + G ++ L E+G+HRLVR SP++S +++ TSF + V P + + ++ Sbjct: 115 KKVEIKVDGEYSFYNLISEKGIHRLVRNSPFNSQNKKMTSFVKVDVIPSLSYNDTNIVNF 174 Query: 225 --------------------------ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 +SD I T R+ G GGQ+VN ++AVRI H PT Sbjct: 175 LNINENDNISLKKNNNMRNMNEMLVNKSDLVIQTMRSGGKGGQNVNKVETAVRIIHKPTN 234 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 + V+ ERSQ NK A M+ KL L+++ + S+K+ +G QIR+Y+L Sbjct: 235 ISVKVSSERSQILNKRIALKMIYEKLLYLQIE-ALKNVKYELSNKSLTHFGEQIRNYILY 293 Query: 319 PYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352 +M+KD RTN+ T +L G++D F++A Sbjct: 294 GNKMIKDTRTNVFSTEIDKILSQGEIDIFVEAYQK 328 >gi|1149684|emb|CAA60204.1| prfA [Clostridium perfringens] Length = 136 Score = 112 bits (281), Expect = 6e-23, Method: Composition-based stats. Identities = 62/128 (48%), Positives = 84/128 (65%), Gaps = 6/128 (4%) Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 D +EIEI++ D +ID +RASG GGQ VNTTDSAVRITH+P+G+VV CQ E+SQ KNK +A Sbjct: 11 DDVEIEINDKDIKIDVFRASGNGGQCVNTTDSAVRITHLPSGLVVSCQDEKSQLKNKEKA 70 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 +LRA+L+ E + E +A I E K+++G G +IR+Y P V D R N+ Sbjct: 71 MKVLRARLF--EQAEAERLAGIAEDRKSQVGTGDRSERIRTYNY-PQGRVTDHRINMTLY 127 Query: 334 SPSDVLDG 341 L+G Sbjct: 128 KLDSFLEG 135 >gi|261326766|emb|CBH09739.1| peptide chain release factor 1, putative [Trypanosoma brucei gambiense DAL972] Length = 459 Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats. Identities = 79/303 (26%), Positives = 138/303 (45%), Gaps = 22/303 (7%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L + + + + D D L + E+D L E ++ V ++ + Sbjct: 131 KLKDQLHSHETLSDDDRDI-----LLMVEEDVRELVEKVRDMDSDVNAVMTRRLNLSDAL 185 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW-AEKRKFKTEAL----EIHDGEEAG- 164 + +N LEV AGG E+ +A+ LL MY + E R + + + G Sbjct: 186 GSCTNTWSLEVAGKAGGEEASLFASELLEMYRAYATEIRHWSVDVDGGEGDGEPVSSGGP 245 Query: 165 ---IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 + +KG Y L+ E GVH++ R+ D + + TS + + + P V D + + Sbjct: 246 AVGGNGMKIKVKGEGVYRNLRHEIGVHKVQRVPVTDQDGKMQTSTAVVTLMP-VLDPVSV 304 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 ++ E DC I+ R SG GGQ + ++ +AV +TH P+G+ V+C Q RS NK A M+ Sbjct: 305 DVHERDCNIEFVRGSGPGGQGMQSSSNAVCLTHKPSGISVKCHQSRSALGNKELALQMVA 364 Query: 282 AKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDV 338 +L L + +++ +++ E+ + G + +R+Y P V D R + S Sbjct: 365 QQL--LVRRVKDQNSSLHETWCNQWSSGERSDKMRTYNY-PQNRVTDHRLGRD-YSLGTF 420 Query: 339 LDG 341 LDG Sbjct: 421 LDG 423 >gi|72386553|ref|XP_843701.1| peptide chain release factor 1 [Trypanosoma brucei TREU927] gi|62175752|gb|AAX69880.1| peptide chain release factor 1, putative [Trypanosoma brucei] gi|70800233|gb|AAZ10142.1| peptide chain release factor 1, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 459 Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats. Identities = 79/303 (26%), Positives = 138/303 (45%), Gaps = 22/303 (7%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L + + + + D D L + E+D L E ++ V ++ + Sbjct: 131 KLKDQLHSHETLSDDDRDI-----LLMVEEDVRELVEKVRDMDSDVNAVMTRRLNLSDAL 185 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW-AEKRKFKTEAL----EIHDGEEAG- 164 + +N LEV AGG E+ +A+ LL MY + E R + + + G Sbjct: 186 GSCTNTWSLEVAGKAGGEEASLFASELLEMYRAYATEIRHWSVDVDGGEGDGEPVSSGGP 245 Query: 165 ---IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 + +KG Y L+ E GVH++ R+ D + + TS + + + P V D + + Sbjct: 246 AVGGNGMKIKVKGEGVYRNLRHEIGVHKVQRVPVTDQDGKMQTSTAVVTLMP-VLDPVSV 304 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 ++ E DC I+ R SG GGQ + ++ +AV +TH P+G+ V+C Q RS NK A M+ Sbjct: 305 DVHEKDCNIEFVRGSGPGGQGMQSSSNAVCLTHKPSGISVKCHQSRSALGNKELALQMVA 364 Query: 282 AKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDV 338 +L L + +++ +++ E+ + G + +R+Y P V D R + S Sbjct: 365 QQL--LVRRVKDQNSSLHETWCNQWSSGERSDKMRTYNY-PQNRVTDHRLGRD-YSLGTF 420 Query: 339 LDG 341 LDG Sbjct: 421 LDG 423 >gi|297817036|ref|XP_002876401.1| hypothetical protein ARALYDRAFT_324229 [Arabidopsis lyrata subsp. lyrata] gi|297322239|gb|EFH52660.1| hypothetical protein ARALYDRAFT_324229 [Arabidopsis lyrata subsp. lyrata] Length = 409 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 77/328 (23%), Positives = 153/328 (46%), Gaps = 16/328 (4%) Query: 34 HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93 LW + ++ ++ + + +K+++ + + ++++L + L E + + Sbjct: 87 DLWDDPAKSDEILLKLADRAKTVDSLKDLKYKAEEAKLIIQLGEMDAIDYSLFEQAYDSS 146 Query: 94 RIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGGTESQD---WANMLLRMYTRWAEKRK 149 + + LL+ + D+ A + + +G+ +SQD W ++ MY +WAEK Sbjct: 147 LDVSRSLHHYEMSKLLTDQYDAEGACMIIKSGSQDAKSQDLQIWTEQVVSMYIKWAEKLG 206 Query: 150 FKTEALEIHD--GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 E ++G+ SAT+ + AYG+L GE+GVHRL+ S S S + Sbjct: 207 QNARVAEKCSFLSNKSGVNSATIEFEFDFAYGYLLGERGVHRLI----ISSTSSEECSAT 262 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 + + S + E+ E D + S ++ ++ V I HIP+G+ V+ ER Sbjct: 263 VDIIPLFLRASPDFEVKEDDLIV-----SYPAKENHKIAENMVSIQHIPSGITVESSGER 317 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327 ++ N+ +A N L+AKL + +++ N S W + R YV + +MV D + Sbjct: 318 NRFANRIKALNRLKAKLLVIAKEQKISDVNKINSKNILKPW-EETRRYVSKGQKMVVDTK 376 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIKK 355 T +E VLDG++ + A +++++ Sbjct: 377 TGLEILDLKSVLDGNIGPLLGAHISMRR 404 >gi|56808306|ref|ZP_00366070.1| COG1186: Protein chain release factor B [Streptococcus pyogenes M49 591] Length = 214 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 90/216 (41%), Positives = 132/216 (61%), Gaps = 2/216 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 + ++ L +P + I A+ +E L +Q+ + +LLE+ E Sbjct: 1 MEEEIALLENHMTEPDFXNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDE 60 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 +D + +E +NL ++ + + LLS D N+A LE+H G+GGTE+QDW ++LL Sbjct: 61 DDS--LKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLL 118 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 RMYTR+ FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLVRISP+DS Sbjct: 119 RMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDS 178 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 RRHTSF+S+ V P +DD+IE+E+ + D ++DT++ Sbjct: 179 AKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFQ 214 >gi|296775660|gb|ADH42937.1| protein chain release factor A [uncultured SAR11 cluster alpha proteobacterium H17925_23J24] Length = 181 Score = 112 bits (280), Expect = 8e-23, Method: Composition-based stats. Identities = 64/154 (41%), Positives = 94/154 (61%), Gaps = 6/154 (3%) Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 + ++ + ++I+I++SD RID +R+SG GGQ VNTTDSAVRITH P+G+VV Sbjct: 21 HTSAATVAILPEAEDVDIKINDSDLRIDVFRSSGPGGQSVNTTDSAVRITHGPSGIVVTQ 80 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320 Q E+SQHKNKA+A +LRA+LY E +K ++ K++IG G +IR+Y P Sbjct: 81 QDEKSQHKNKAKALKILRARLY--ESEKLKKERQRSSERKSQIGTGDRSERIRTYNF-PQ 137 Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 V D R N +D L+G++ + M L +K Sbjct: 138 GRVTDHRINFTLHKLTDFLNGEIHEEMNENLRLK 171 >gi|163803384|ref|ZP_02197260.1| putative peptide chain release factor 2 [Vibrio sp. AND4] gi|159172846|gb|EDP57688.1| putative peptide chain release factor 2 [Vibrio sp. AND4] Length = 193 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 91/192 (47%), Positives = 131/192 (68%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95 W A+ L +ER L+ + I +++ + D LLELA+EE+D E L + Sbjct: 2 WNEPERAQALGKERASLEAIVETIVQLEQGVEDVEGLLELAVEEEDQETFDEIEPELAEL 61 Query: 96 KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + ++E +F + SG+ DS+D Y+++ AG+GGTE+QDW NM+LRMY RWAE + FK+E + Sbjct: 62 EGKLEKLEFRRMFSGDHDSSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKSEVI 121 Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215 E+ +GE AG+K AT+ I G AYGWL+ E GVHRLVR SP+DS RRHTSF+S ++YP + Sbjct: 122 EVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEI 181 Query: 216 DDSIEIEISESD 227 DD+I I+I+ SD Sbjct: 182 DDNINIDINPSD 193 >gi|68072219|ref|XP_678023.1| peptide chain release factor [Plasmodium berghei strain ANKA] gi|56498354|emb|CAH99275.1| peptide chain release factor, putative [Plasmodium berghei] Length = 329 Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 85/275 (30%), Positives = 131/275 (47%), Gaps = 33/275 (12%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI---HDGEEAGI 165 + N L + +G GGTE+ D+ NML MY ++ K K K E GI Sbjct: 55 YSKYFKNSCSLILSSGTGGTEACDFCNMLYNMYMKYLGKIKNKKYIKYEVIDISKNEIGI 114 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS- 224 K + + G ++ L E+G+HRLVR SP++S +++ TSF + V P + + ++ Sbjct: 115 KKVEIKVDGEYSFYNLISEKGIHRLVRNSPFNSQNKKMTSFVKVDVIPSLSYNDTNIVNF 174 Query: 225 --------------------------ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 +SD I T R+ G GGQ+VN ++AVRI H PT Sbjct: 175 LNINENDNISLKKNNNMRNMNEMLVNKSDLVIQTMRSGGKGGQNVNKVETAVRIIHKPTN 234 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 + V+ ERSQ NK A M+ LY + + +K+ +G QIR+Y+L Sbjct: 235 ISVKVSSERSQILNKRIALKMIEKLLYLQIEALKNVKYELS--NKSLTHFGEQIRNYILY 292 Query: 319 PYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352 +M+KD RTN+ T +L G++D F++A Sbjct: 293 GNKMIKDTRTNVFSTEIDKILSQGEIDIFVEAYQK 327 >gi|154338826|ref|XP_001565635.1| peptide chain release factor-like protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062687|emb|CAM39130.1| peptide chain release factor-like protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 302 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 65/228 (28%), Positives = 116/228 (50%), Gaps = 10/228 (4%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRW-AEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 + V AGG E+ +A L MY + E K++ + + DG EA S ++G Sbjct: 44 WNINVEGKAGGEEASLFAAELAEMYRTYAMEFCKWEVCPVAMDDGSEA-CSSNEFQVRGE 102 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 Y + E GVH++ R+ D+ + TS + + P V D + +++ ESDC+ID R Sbjct: 103 GVYRNMHHEIGVHKVQRVPVTDATGKMQTSTAVFTLMP-VLDPVSVDVHESDCKIDFVRG 161 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQ + ++ + V +TH P+G+ V+C Q RS NK A M+ ++ L + +E+ Sbjct: 162 SGPGGQGMQSSSNCVVLTHKPSGISVKCHQCRSALGNKELALQMVAQQI--LARRVKEQN 219 Query: 296 ANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 +++ ++ + + G ++R+Y P V D R + + S ++ Sbjct: 220 SSLHKAWQNQWSSGERSDRMRTYNY-PQNRVTDHRIG-KDYALSSFME 265 >gi|154270254|ref|XP_001535983.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150410054|gb|EDN05442.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 223 Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats. Identities = 60/195 (30%), Positives = 96/195 (49%), Gaps = 21/195 (10%) Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI--------------EIEIS 224 + E GVHR+ R+ ++ R HTS S+ + P I + I Sbjct: 2 RRFETEAGVHRVQRVPTTENKGRTHTSAVSVVILPSYPSIIGEGDSELNFDDPNSDYYID 61 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 + ++ RA GAGGQHVN T+SA+R+THIPTG+VV Q RSQH+N+ +AW++LRA++ Sbjct: 62 PQEVNVEKMRAGGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWHLLRARI 121 Query: 285 YELELQKREEIANIGE----SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340 + + REE ++G G +IR+Y D R+ + + +++ Sbjct: 122 AQQRREAREEEMVKLRRGVMGGVAKMGRGDKIRTYNFG-QNRCTDHRSGLTLHNLGSIME 180 Query: 341 G--DLDDFMKATLAI 353 G L+ M + Sbjct: 181 GGDGLEKIMDSVRGW 195 >gi|213861334|ref|ZP_03385804.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 197 Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats. Identities = 120/195 (61%), Positives = 143/195 (73%) Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ A Sbjct: 3 QGLDDVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQA 62 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G+GGTE+QDWA+MLLRMY RWAE R FKTE +E +GE AGIKSAT+ I G AYGWL+ Sbjct: 63 GSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLRT 122 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 E GVHRLVR SP+DS RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHV Sbjct: 123 ETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHV 182 Query: 244 NTTDSAVRITHIPTG 258 N T+SAVRITHIPTG Sbjct: 183 NRTESAVRITHIPTG 197 >gi|213583820|ref|ZP_03365646.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 95 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 49/94 (52%), Positives = 64/94 (68%), Gaps = 1/94 (1%) Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 + QCQ +RSQHKNK QA ++AKLYELE+QK+ E +K++IGWG QIRSYVL Sbjct: 1 MTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWGSQIRSYVLDD 60 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +KDLRT +E + VLDG LD F++A+L Sbjct: 61 -SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 93 >gi|315283645|ref|ZP_07871778.1| peptide chain release factor 2 [Listeria marthii FSL S4-120] gi|313612712|gb|EFR86721.1| peptide chain release factor 2 [Listeria marthii FSL S4-120] Length = 70 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 32/68 (47%), Positives = 41/68 (60%) Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 E +++E + EIGWG QIRSYV PY MVKD RT+ E + V+DGDLDDF Sbjct: 1 KEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTSYETGNIQAVMDGDLDDF 60 Query: 347 MKATLAIK 354 + A L + Sbjct: 61 INAYLRSR 68 >gi|149919721|ref|ZP_01908199.1| peptide chain release factor RF-1 [Plesiocystis pacifica SIR-1] gi|149819492|gb|EDM78922.1| peptide chain release factor RF-1 [Plesiocystis pacifica SIR-1] Length = 311 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 59/287 (20%), Positives = 101/287 (35%), Gaps = 11/287 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +N +R L D + + L RE L ++ + EL Sbjct: 9 IENIAERHEELGEMICDQEVMADKRRFLELSREHAELTPVAMAFAKLVELERQLGETREL 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + D + Q +++ D+ + LE+ AG GG E+ + Sbjct: 69 LDDPDMRELAQADVRELGGQVEDAETELTRLLTPKDPNDAKNVILEIRAGTGGDEAGLFV 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY R++E+ ++ + +E + G K T ++G A+ LK E+GVHR+ R+ Sbjct: 129 ADLWRMYNRFSERHRWAIDQVEFSENSAGGFKEITGRVQGKGAWAQLKFERGVHRVQRVP 188 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI---------DTYRASGAGGQHVNT 245 +S R HTS +++ + P S I + T G Sbjct: 189 ATESQGRIHTSTATVAIMPEPRTSTSTSIPRTSSSRPCARAARAGSTSTPRLRGPPAPQA 248 Query: 246 TDSAVRITHIPTGVVVQCQQE-RSQHKNKAQAWNMLRAKLYELELQK 291 VR + RS+ ++ Q+ R E QK Sbjct: 249 HGHRVRCDQRSPAQNASSHEALRSRCSDQIQSKQRRRPWSDRREAQK 295 >gi|219129897|ref|XP_002185114.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217403293|gb|EEC43246.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 283 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 89/246 (36%), Positives = 126/246 (51%), Gaps = 29/246 (11%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168 + +DA +E+ AG GG E+ +A+ LL Y + A ++K E L + GI+ A Sbjct: 42 DEDDYESDAIIEIRAGTGGDEASLFASELLEAYQKAAMAIRWKVEVLAESRTDIGGIREA 101 Query: 169 TLLIKGPN-------------------AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209 ++ I G YG K E GVHR+ R+ DS R HTS SI Sbjct: 102 SISISGNASFRLPATDSEREDSGPLLGPYGAFKFESGVHRVQRVPINDS--RIHTSACSI 159 Query: 210 WVYPV--VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 V P + + + S+ RI+T R+SGAGGQHVNTTDSAVRITH+PTG+ Q ER Sbjct: 160 AVLPFVSSISNEKELLPMSELRIETMRSSGAGGQHVNTTDSAVRITHLPTGITAAIQDER 219 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVK 324 SQHKNKA+A ++ A++ + Q+ + GE +G +IR+Y P + Sbjct: 220 SQHKNKAKALKLITARVRD--RQRTDAQLARGELRSNLMGGGDRSERIRTYNY-PQDRIT 276 Query: 325 DLRTNI 330 D R + Sbjct: 277 DHRCKV 282 >gi|315254830|gb|EFU34798.1| PCRF domain protein [Escherichia coli MS 85-1] Length = 210 Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats. Identities = 51/194 (26%), Positives = 81/194 (41%), Gaps = 1/194 (0%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ ++ + + Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSFSS 208 +S R HTS Sbjct: 189 ATESQGRIHTSACY 202 >gi|124507187|ref|XP_001352190.1| peptide release factor, putative [Plasmodium falciparum 3D7] gi|23505221|emb|CAD52001.1| peptide release factor, putative [Plasmodium falciparum 3D7] Length = 404 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 73/321 (22%), Positives = 138/321 (42%), Gaps = 11/321 (3%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88 K + + ++I+ + L+ + K++ + D+ E L++++ Sbjct: 38 KISEHKAYSDIIKLQKHSHMLHTLNEELDIYKQLLKEIIDSKESYEERLKKNEDINQLNC 97 Query: 89 SDNLQRIKLEVEYKQFESLL---SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145 + + F D+ + +E+ AG GG E++ ++ L MY + Sbjct: 98 HIESVTNLIIDDIILFYKSYVNQDHHLDATEIKMEITAGVGGFEAKMFSKELFHMYENFC 157 Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 R + E E+ + E K+ L I+G N Y E G+HR+ R+ ++++ TS Sbjct: 158 RVRNYDYEMKEVINDEAKENKNIVLYIRGNNIYEDFYQENGIHRVQRVP--INSNKVQTS 215 Query: 206 FSSIWVYPVVDDSIEIE----ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 S +++ I S+ D I T R+ GAGGQ VN ++ V+I H PT + V Sbjct: 216 TSIVFICDEKKQKDNIMKKINFSKQDLLIQTKRSGGAGGQSVNKNETCVKILHKPTNIFV 275 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGESSKTEIGWGRQIRSYVLQPY 320 + Q+ SQ NK A +L+ KLY + ++ ++ K +IR+Y + Sbjct: 276 EVQKTSSQIHNKNLAMQLLKDKLYNFYYELEKNNFLKEKKNQKQSADRSHKIRTYNFL-H 334 Query: 321 QMVKDLRTNIEKTSPSDVLDG 341 ++ D TN + + + G Sbjct: 335 DVIIDHITNTQYSGIQNFFKG 355 >gi|291533125|emb|CBL06238.1| Protein chain release factor B [Megamonas hypermegale ART12/1] Length = 182 Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 103/169 (60%), Positives = 133/169 (78%), Gaps = 1/169 (0%) Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY RWAE+ F E ++ G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+D+N Sbjct: 1 MYGRWAERNGFSVETADLLPGDEAGVKSVTLLIKGHNAYGYLKSEKGVHRLVRISPFDAN 60 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 SRRHTSFS+ V P +DD +E++I+ +D R+DTYRASGAGGQH+N TDSAVR+THIPTGV Sbjct: 61 SRRHTSFSACDVMPEIDDDVEVDINMADVRVDTYRASGAGGQHINKTDSAVRMTHIPTGV 120 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIG 307 V QCQ ERSQ +N+ Q +LRA+L+ELE++K+E+ + +SK G Sbjct: 121 VAQCQSERSQLQNREQCLRLLRARLFELEMEKKEKNLQHLKVTSKKLNG 169 >gi|270289542|ref|ZP_06195844.1| peptide chain release factor 2 [Chlamydia muridarum Weiss] Length = 182 Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats. Identities = 98/166 (59%), Positives = 121/166 (72%) Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY+RWA +K E ++ DGE AGIK TL + G AYG+ K E GVHRLVRISP+DSN Sbjct: 1 MYSRWANSHGWKVEVIDRLDGEVAGIKHITLKLIGEYAYGYAKAESGVHRLVRISPFDSN 60 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 ++RHTSF+S+ V+P +DD IE+EI D RIDTYR+SGAGGQHVN TDSAVRITH PTG+ Sbjct: 61 AKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGI 120 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 VV CQ ERSQ +N+ NMLRA++Y+ LQ+R E N K + Sbjct: 121 VVSCQSERSQIQNREACMNMLRARIYQKLLQERLEKQNTNRKEKKK 166 >gi|313622391|gb|EFR92858.1| peptide chain release factor 2 [Listeria innocua FSL J1-023] Length = 55 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 31/53 (58%), Positives = 36/53 (67%) Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + EIGWG QIRSYV PY MVKD RTN E + V+DGDLDDF+ A L + Sbjct: 1 EQKEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 53 >gi|169838094|ref|ZP_02871282.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [candidate division TM7 single-cell isolate TM7a] Length = 190 Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats. Identities = 86/172 (50%), Positives = 118/172 (68%), Gaps = 2/172 (1%) Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 M+TR+AE+ ++KTE +E ++ G+K T LIKG AY LK E GVHR+ R+ +S+ Sbjct: 1 MFTRYAERNRWKTEIIEKNEIGVGGLKEVTFLIKGHGAYSRLKFESGVHRVQRVPATESS 60 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS ++ V P +DD E+EI+ SD +IDTYR+SGAGGQHVNTTDSAVRITH+PTG+ Sbjct: 61 GRVHTSTITVAVLPEIDDVSEVEINPSDLKIDTYRSSGAGGQHVNTTDSAVRITHLPTGL 120 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311 VV Q RSQ KNK A +L +KLYE+E +K+ ++++G G + Sbjct: 121 VVTSQDGRSQIKNKEAAMKVLVSKLYEMECEKQRSAVEN--ERRSQVGSGDR 170 >gi|156305180|ref|XP_001617535.1| hypothetical protein NEMVEDRAFT_v1g157388 [Nematostella vectensis] gi|156194391|gb|EDO25435.1| predicted protein [Nematostella vectensis] Length = 80 Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats. Identities = 39/78 (50%), Positives = 51/78 (65%), Gaps = 1/78 (1%) Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 LRAKLYE+E+ KR A E SK +IGWG QIRSYVL +KDLRT ++ ++ Sbjct: 2 CMKQLRAKLYEMEMMKRNAAAQELEDSKADIGWGSQIRSYVLDDQ-RIKDLRTGVQTSNC 60 Query: 336 SDVLDGDLDDFMKATLAI 353 VLDG+LD F++A+L Sbjct: 61 DRVLDGELDMFIEASLKA 78 >gi|146332693|gb|ABQ22852.1| mitochondrial peptide chain release factor 1 precursor-like protein [Callithrix jacchus] Length = 192 Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats. Identities = 67/175 (38%), Positives = 98/175 (56%), Gaps = 10/175 (5%) Query: 184 EQGVHRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E G+HR+ RI +SR + + + D +++++ D RIDT+RA GAGGQ Sbjct: 1 EGGIHRVQRIPEVGLSSRMQRIHTGTMSVIILPQPDEVDVKLDPKDLRIDTFRARGAGGQ 60 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 HVNTTDSAVR+ HIPTG+VV+CQQERSQ +NK A ++LRA+LY+ ++K + Sbjct: 61 HVNTTDSAVRLVHIPTGLVVECQQERSQIRNKEIALSVLRARLYQQIIEKN--KCQQHST 118 Query: 302 SKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351 K ++G G +I +Y V D R E + + G LD ++ L Sbjct: 119 RKLQVGTGAQSERILTYNF-TQDRVTDHRIAYEVRDIKEFVCGGKALDQLIQRLL 172 >gi|323964709|gb|EGB60180.1| peptide chain release [Escherichia coli M863] Length = 200 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 50/192 (26%), Positives = 81/192 (42%), Gaps = 1/192 (0%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + + + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGEAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + Q+ ++ + + Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L RMY+R+AE R+++ E + +GE G K I G YG LK E G HR+ R+ Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188 Query: 195 PYDSNSRRHTSF 206 +S R HTS Sbjct: 189 ATESQGRIHTSA 200 >gi|213419806|ref|ZP_03352872.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 133 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 53/118 (44%), Positives = 77/118 (65%), Gaps = 6/118 (5%) Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++ E KR+ Sbjct: 1 RSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQ 60 Query: 294 EIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + + + +G G + R+Y P V D R N+ + ++G LD ++ Sbjct: 61 Q--AEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIE 115 >gi|46190861|ref|ZP_00121023.2| COG1186: Protein chain release factor B [Bifidobacterium longum DJO10A] Length = 115 Score = 102 bits (255), Expect = 6e-20, Method: Composition-based stats. Identities = 45/104 (43%), Positives = 65/104 (62%), Gaps = 1/104 (0%) Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 RITH+PTG+VV Q ERSQ +N+A A +L+++L L ++ + + WG Sbjct: 2 RITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVLRHEEEAKKKKELAGD-IKASWGD 60 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 Q+RSYVL PYQMVKDLRT E + V DGD++ F++A + + Sbjct: 61 QMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINAFIEAGIRWR 104 >gi|322829249|gb|EFZ32717.1| peptide chain release factor 1, putative [Trypanosoma cruzi] Length = 476 Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats. Identities = 73/291 (25%), Positives = 131/291 (45%), Gaps = 29/291 (9%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 L++ E+D L N+ V ++ ES + + S LEV AGG E+ +A Sbjct: 155 LSMLEEDMESLLNQVRNMDDCVNGVMARRLESSDTLGSSSRAWVLEVTGKAGGEEASLFA 214 Query: 135 NMLLRMYTRWAE-KRKFKTEALE--------------------IHDGEEAGIKSATLLIK 173 + L MY ++ R ++ E E Sbjct: 215 SELAEMYREYSTGVRNWRIEEAENGAGGGGGGAAGGGGGGDASALSAPALASTGVKFKAI 274 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G + Y L+ E GVH++ R+ D + + TS + + + P V D + + + E+DC+I+ Sbjct: 275 GDSVYRNLRHEIGVHKVQRVPLTDQDGKMQTSTAVVTLMP-VLDPVSVNVHENDCKIEFV 333 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 R SG GGQ + ++ +AV +THIP+G+ V+C Q RS NK A ++ +L L + ++ Sbjct: 334 RGSGPGGQGMQSSSNAVCLTHIPSGISVKCHQSRSALGNKETALQLVAQQL--LAQRVKD 391 Query: 294 EIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 + ++ E+ + + G + +R+Y P V D R + + ++G Sbjct: 392 QNSSFHEAWRNQWSSGERSDKMRTYNF-PQNRVTDHRLGKDFP-LNTFMEG 440 >gi|71650872|ref|XP_814125.1| peptide chain release factor 1 [Trypanosoma cruzi strain CL Brener] gi|70879071|gb|EAN92274.1| peptide chain release factor 1, putative [Trypanosoma cruzi] Length = 456 Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats. Identities = 77/322 (23%), Positives = 139/322 (43%), Gaps = 27/322 (8%) Query: 42 AKMLMRERQHLDNAISFIKEIQDRLCDN-LILLELALEEDDCSILQETSDNLQRIKLEVE 100 A+ + L+ + +I L++ E+D L N+ V Sbjct: 104 AEEISGYLVKLNENVKLRDQILLEKDSVGEDRDLLSILEEDMESLLNQVRNMDDCVNGVM 163 Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALE--- 156 ++ ES + + S LEV AGG E+ +A L MY ++ R ++ E E Sbjct: 164 ARRLESSDTLGSSSRAWVLEVTGKAGGEEASLFAAELAEMYREYSTGVRNWRIEEAENGA 223 Query: 157 --------------IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202 G N Y L+ E GVH++ R+ D + + Sbjct: 224 GGAAGGGGGGGDASALSAPALASTGVKFKAIGDNVYRNLRHEIGVHKVQRVPLTDQDGKM 283 Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 TS + + + P V D + + + E+DC+I+ R SG GGQ + ++ +AV +THIP+G+ V+ Sbjct: 284 QTSTAVVTLMP-VLDPVSVNVHENDCKIEFVRGSGPGGQGMQSSSNAVCLTHIPSGISVK 342 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQP 319 C Q RS NK A ++ +L L + +++ +++ E+ + + G + +R+Y P Sbjct: 343 CHQSRSALGNKEIALQLVAQQL--LAQRVKDQNSSLHEAWRNQWSSGERSDKMRTYNY-P 399 Query: 320 YQMVKDLRTNIEKTSPSDVLDG 341 V D R + + ++G Sbjct: 400 QNRVTDHRLGKDFP-LNTFMEG 420 >gi|328466430|gb|EGF37577.1| peptide chain release factor 2 [Lactobacillus rhamnosus MTCC 5462] Length = 189 Score = 102 bits (254), Expect = 8e-20, Method: Composition-based stats. Identities = 99/189 (52%), Positives = 136/189 (71%) Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + +E D + E L+ ++ +++ + + LL+G D N+A LE+H GAGGTESQDW Sbjct: 1 MLQDEPDPDLQHEEETKLKDLQEKLDQYEMQLLLNGPYDHNNAILEIHPGAGGTESQDWG 60 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 +ML+RMY RWA++ FK E + G+EAGIKS TLLI G NAYG LK E+GVHRLVRIS Sbjct: 61 SMLMRMYQRWADQNGFKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEKGVHRLVRIS 120 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P+DS RRHTSF+S+ V P +D+SIE++I D +++ +R+SGAGGQH+N T SAVR+ H Sbjct: 121 PFDSAGRRHTSFASVDVMPELDNSIEVDIRPEDIKMEVFRSSGAGGQHINKTSSAVRLIH 180 Query: 255 IPTGVVVQC 263 +PTG+V Sbjct: 181 LPTGIVTSS 189 >gi|145362209|ref|NP_973706.2| peptide chain release factor, putative [Arabidopsis thaliana] gi|110735990|dbj|BAE99969.1| putative peptide chain release factor [Arabidopsis thaliana] gi|330255694|gb|AEC10788.1| Peptide chain release factor 1 [Arabidopsis thaliana] Length = 256 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 83/240 (34%), Positives = 132/240 (55%), Gaps = 6/240 (2%) Query: 39 VIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET-----SDNLQ 93 E +E + L +++ I +++ + + L L E D + + + ++ Sbjct: 16 PEEFSRANKELRKLRDSMLLINDLRAKQKEIDGLKSLVSESSDDKDMLDLAVGELDEAVE 75 Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 K L EAD D LEV AG GG E+ +A + RMY R+++K+ +K + Sbjct: 76 EEKRLQTLLLKSLLPKDEADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKGWKFD 135 Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 ++I + + G K A+ I G + YG LK E G+HR+ RI + + R HTS S+ + P Sbjct: 136 IVDITESDMKGYKEASAAICGASVYGKLKFESGIHRVQRIPITEKSGRIHTSAISVAILP 195 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 D +++++ D RIDTYR+ G+GGQH NTT+SAVRI H+PTG++V Q ERSQH ++ Sbjct: 196 -QADEVDVQLRNEDLRIDTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMSQ 254 >gi|325119759|emb|CBZ55312.1| hypothetical protein NCLIV_057350 [Neospora caninum Liverpool] Length = 427 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 63/186 (33%), Positives = 97/186 (52%), Gaps = 5/186 (2%) Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 G + L P+A+ +L E G+HR+ R+ P ++ R TS +++ V P Sbjct: 201 EIQAGVGGEDA--ALFSRPDAFRFLSLEAGIHRVQRVPPTEARGRMQTSATAVTVLPRSS 258 Query: 217 D-SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 + +I++S +ID RASG GGQ VN +++AVRITH PTGV V C + +SQ +NK Sbjct: 259 NLEDKIDLSPPTLKIDFMRASGPGGQSVNKSETAVRITHKPTGVSVHCMRTQSQTENKNL 318 Query: 276 AWNMLRAKLYELELQKREEIA-NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334 A +LRA+L + ++K E ++ K +IR+Y Q +V D R + Sbjct: 319 ALELLRAQLLQQMMRKASEERGRAIDAQKGSKDRSEKIRTYNFQ-RDVVTDHRCRMHVNG 377 Query: 335 PSDVLD 340 D LD Sbjct: 378 VEDFLD 383 >gi|330951102|gb|EGH51362.1| peptide chain release factor 1 [Pseudomonas syringae Cit 7] Length = 111 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 6/105 (5%) Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310 H+P+G+VV+CQ+ERSQHKN+A+A + L AKL + Q I K +G G Sbjct: 1 HLPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAANAIASERKLLVGSGDRSE 58 Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +IR+Y P V D R N+ S +VL G +D ++ LA + Sbjct: 59 RIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQ 102 >gi|116334943|ref|YP_802438.1| putative peptide chain release factor A [Candidatus Carsonella ruddii PV] gi|116235224|dbj|BAF35072.1| putative peptide chain release factor A [Candidatus Carsonella ruddii PV] Length = 229 Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats. Identities = 67/235 (28%), Positives = 117/235 (49%), Gaps = 12/235 (5%) Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 N +E+ G GG ES ++A + +MY ++ EK+ E + + K L ++ Sbjct: 3 NYLIIEIRQGIGGEESINFAKDIYKMYVKFFEKQNINFEIISNSN-----FKEIILKVEN 57 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 L E G+HR+ RI ++ R HTS +++V ++ +++ D +I+ + Sbjct: 58 NVFDKKLLNESGIHRVQRIPKSETQGRVHTSTCTVFVA-NINLDNNLKLKNEDLKIEICK 116 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 +SG+GGQHVN T+SA++I H+PT + V+C ERSQ+ NK +A +L K+ L+ QK Sbjct: 117 SSGSGGQHVNKTNSAIKIIHLPTKIAVECSDERSQNLNKTKALIILNMKI--LKFQKNNY 174 Query: 295 IANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346 + K I + IR+Y + D N + +L+G+ + Sbjct: 175 NTQLNNVRKKLISNSERAKKIRTYNF-TNNKITDHINNKNYFQLNKILNGEFNLI 228 >gi|298369317|ref|ZP_06980635.1| peptide chain release factor 1 [Neisseria sp. oral taxon 014 str. F0314] gi|298283320|gb|EFI24807.1| peptide chain release factor 1 [Neisseria sp. oral taxon 014 str. F0314] Length = 106 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 6/100 (6%) Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSY 315 +VV+CQ RSQH NKAQA +L A+L + QKRE A K+ IG G + IR+Y Sbjct: 1 MVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSGDRSECIRTY 58 Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 P V D R N+ V+DGDL++ A +A + Sbjct: 59 NY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQ 97 >gi|71393327|ref|XP_802218.1| peptide chain release factor 1 [Trypanosoma cruzi strain CL Brener] gi|70859733|gb|EAN80772.1| peptide chain release factor 1, putative [Trypanosoma cruzi] Length = 270 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 50/175 (28%), Positives = 93/175 (53%), Gaps = 8/175 (4%) Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 G + Y L+ E GVH++ R+ D + + TS + + + P V D + + + E+DC+ Sbjct: 65 FKAIGDSVYRNLRHEIGVHKVQRVPLTDQDGKMQTSTAVVTLMP-VLDPVSVNVHENDCK 123 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 I+ R SG GGQ + ++ +AV +THIP+G+ V+C Q RS NK A ++ +L L Sbjct: 124 IEFVRGSGPGGQGMQSSSNAVCLTHIPSGISVKCHQSRSALGNKETALQLVAQQL--LAQ 181 Query: 290 QKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 + +++ ++ E+ + + G + +R+Y P V D R + + ++G Sbjct: 182 RVKDQNSSFHEAWRNQWSSGERSDKMRTYNF-PQNRVTDHRLGKDFP-LNTFMEG 234 >gi|213855686|ref|ZP_03383926.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 78 Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 37/77 (48%), Positives = 50/77 (64%), Gaps = 1/77 (1%) Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336 ++AKLYELE+QK+ E +K++IGWG QIRSYVL +KDLRT +E + Sbjct: 1 MKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQ 59 Query: 337 DVLDGDLDDFMKATLAI 353 VLDG LD F++A+L Sbjct: 60 AVLDGSLDQFIEASLKA 76 >gi|237840539|ref|XP_002369567.1| peptide chain release factor 1, putative [Toxoplasma gondii ME49] gi|211967231|gb|EEB02427.1| peptide chain release factor 1, putative [Toxoplasma gondii ME49] gi|221503426|gb|EEE29124.1| peptide chain release factor, putative [Toxoplasma gondii VEG] Length = 497 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 61/186 (32%), Positives = 98/186 (52%), Gaps = 9/186 (4%) Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 G+ ++GP Y L E GVHR+ R+ ++ R HTS +++ + + +E Sbjct: 272 GGVTCIAFRVEGPGVYRQLLKESGVHRVQRVPRTEAQGRIHTSTATVAIVA-EHNFRGVE 330 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I+++D I T R+SG GGQ+VN ++AV + H+PTG+ V CQQER+Q NK A +L Sbjct: 331 INDADLVIRTARSSGCGGQNVNKVETAVDLLHVPTGIRVFCQQERTQAANKKAAKAVLLK 390 Query: 283 KLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLR-TNIE-KTSPSD 337 KL + E + + E + ++ G ++R+Y + V + R T E S Sbjct: 391 KLAARHEE--EVVQQMREERRDQVSSGLRSERVRTYNFRD-GRVNEHRLTGGEGLFSLKS 447 Query: 338 VLDGDL 343 VL+G L Sbjct: 448 VLEGQL 453 >gi|146340|gb|AAA23958.1| peptide-chain-release factor 2 [Escherichia coli] Length = 72 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 1/71 (1%) Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 KLYELE+QK+ E +K++IGWG QIRSYVL +KDLRT +E + VLDG Sbjct: 1 KLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGS 59 Query: 343 LDDFMKATLAI 353 LD F++A+L Sbjct: 60 LDQFIEASLKA 70 >gi|218196675|gb|EEC79102.1| hypothetical protein OsI_19734 [Oryza sativa Indica Group] gi|222631381|gb|EEE63513.1| hypothetical protein OsJ_18329 [Oryza sativa Japonica Group] Length = 214 Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats. Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 3/215 (1%) Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY+ WA K+ K +E + +A + I+ +G L GE+G HR++ S ++ Sbjct: 1 MYSSWARKQGCKDGLVEKITSTSGRVWTAAIEIESEYMFGTLTGEKGTHRMIYPSVDNAG 60 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 + TS + +D + + + E+D I + H N SA+R+ HI TGV Sbjct: 61 TYEATSARVDIIPLFLDRPVNLHLDENDLEISPSPSDHKRRDHRN---SAIRVQHIRTGV 117 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319 + ERS NK +A + L+AKL + + R + E + R+ R Y P Sbjct: 118 TAESSGERSYFANKMKAISRLKAKLLVISRELRSSNLKTIKRQTVEELYSRETRRYKFGP 177 Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 ++V DL T ++ + + VLDGD+D F++ + + Sbjct: 178 QKLVHDLNTGLQLSELNSVLDGDIDPFIRGRIVSR 212 >gi|326478702|gb|EGE02712.1| peptide chain release factor 1 [Trichophyton equinum CBS 127.97] Length = 360 Score = 99.9 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 78/298 (26%), Positives = 134/298 (44%), Gaps = 28/298 (9%) Query: 43 KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 + + + + +K+ L L E + L+ +++ + Sbjct: 44 RAAAKRIGEIAPVANALKDWDTAHESITELQGLIDEPSTDTELKSLAEDDITTTIGTLSS 103 Query: 103 -----QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157 + + +E+ GAGG E+ +A +LRMYT + R +T +++ Sbjct: 104 LSDTLKRALIPRHPFADMPCLIEIRPGAGGDEAGLFAAKMLRMYTSFCSSRGLRTTIIKM 163 Query: 158 HDGEEAG------IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 + G + + ++ P +Y L+ E GVHR+ R+ ++ R HTS S+ + Sbjct: 164 EAEDGVGAGAEERLSEVVMEVETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMI 223 Query: 212 YP-------------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 P D + + ++ D + + +RASGAGGQHVN T+SAVR+THIPTG Sbjct: 224 LPSFPENNQEDSPLNFDDPNSDYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHIPTG 283 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQI 312 V+ Q RSQH+N+ +AW +LRAKL + + RE+ + G G +I Sbjct: 284 TVISMQDSRSQHENRRKAWLLLRAKLAQARREAREQEMMELRRGAMGGVNKTGRGDKI 341 >gi|95007275|emb|CAJ20495.1| peptide chain release factor 1, putative [Toxoplasma gondii RH] gi|221482780|gb|EEE21111.1| peptide chain release factor, putative [Toxoplasma gondii GT1] Length = 497 Score = 99.9 bits (247), Expect = 5e-19, Method: Composition-based stats. Identities = 59/186 (31%), Positives = 97/186 (52%), Gaps = 9/186 (4%) Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 G+ ++GP Y L E GVHR+ R+ ++ R HTS +++ + + + Sbjct: 272 GGVTCIAFRVEGPGVYRQLLKESGVHRVQRVPRTEAQGRIHTSTATVAIVA-EHNFQGVA 330 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I+++D I T R+SG GGQ+VN ++AV + H+PTG+ V CQQER+Q NK A +L Sbjct: 331 INDADLVIRTARSSGCGGQNVNKVETAVDLLHVPTGIRVFCQQERTQAANKKAAKAVLLK 390 Query: 283 KLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLR-TNIE-KTSPSD 337 KL + E + + E + ++ G ++R+Y + V + R T E S Sbjct: 391 KLAARHEE--EVVQQMREERRDQVSSGLRSERVRTYNFRD-GRVNEHRLTGGEGLFSLKS 447 Query: 338 VLDGDL 343 +L+G L Sbjct: 448 ILEGQL 453 >gi|156081736|ref|XP_001608361.1| peptide release factor [Plasmodium vivax SaI-1] gi|148800932|gb|EDL42337.1| peptide release factor, putative [Plasmodium vivax] Length = 446 Score = 99.5 bits (246), Expect = 7e-19, Method: Composition-based stats. Identities = 63/239 (26%), Positives = 113/239 (47%), Gaps = 9/239 (3%) Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE-IHDGEEAGIKSA 168 D+++ LE+ G GG E++ + + LL MY + + + F+ + D + G ++ Sbjct: 180 HHLDTDEVKLEITPGVGGLEAKLFCSDLLSMYEHFCKLKDFQCTLIRGESDDAKDGHRNI 239 Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP----VVDDSIEIEIS 224 ++KG Y E G+HR+ R+ ++ + TS S ++VY ++ + Sbjct: 240 VAVVKGERVYEHFVQENGIHRVQRVP--VNSKKIQTSTSVVFVYDEESLRKKIKKKMNLK 297 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 +SD I+T R+ G GGQ VN ++ V++ H PT + V+ Q+ SQ +N+ A L+ KL Sbjct: 298 KSDLIIETKRSGGPGGQSVNKNETCVKVLHKPTNISVEVQKTSSQMQNRNMAIEALKTKL 357 Query: 285 YE-LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 + Q+++ S K +IRSY V D +N++ GD Sbjct: 358 FSFYYQQEKDLFFKCRRSHKMSGDRSEKIRSYNFI-NDFVTDHLSNVQYPGIDLFFRGD 415 >gi|294949753|ref|XP_002786323.1| peptide chain release factor 1, putative [Perkinsus marinus ATCC 50983] gi|239900543|gb|EER18119.1| peptide chain release factor 1, putative [Perkinsus marinus ATCC 50983] Length = 423 Score = 99.5 bits (246), Expect = 8e-19, Method: Composition-based stats. Identities = 75/340 (22%), Positives = 129/340 (37%), Gaps = 33/340 (9%) Query: 40 IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV 99 E + E L+ + + D + E D +N L Sbjct: 79 DEMLSVSDEIAKLEQ-----ESAKLERNDISMKSMFNAEVDSQLEKIIEIENRLFDHLHT 133 Query: 100 EY----KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 + + D++D +E+ G GG E+ W + M R+A + + Sbjct: 134 RMSNEGIDCATWHAYVKDASDCTVEIRPGVGGVEAGKWCKDIFDMLERFAGIMGWAAPEV 193 Query: 156 EIHDG-EEAGIKSATLLI---------KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 ++ + ++G + +G+LK E G+HR+ R+ + ++S TS Sbjct: 194 KVMEQGWQSGYRQIIADFFLKPGVKRTPEKGIFGYLKFEAGIHRVQRVPSWPADSLPQTS 253 Query: 206 FSSIWVYPVVDDS---IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 S+ V P D + I + T ++SG GGQ VN AVRI HI +GV Sbjct: 254 ACSVVVLPREDPNSNLIPVLKPHEYKVWITKKSSGPGGQCVNAAHQAVRIRHIESGVEGF 313 Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQP 319 R+ NKA A + K+ E + +K + I K +G G +IRSY Sbjct: 314 ADCYRALKSNKALALQQVSQKIMEEKGKKIAKERGII--RKQHMGSGDRSEKIRSYNYL- 370 Query: 320 YQMVKDLR---TNIEKTSPSDVLDGD--LDDFMKATLAIK 354 V D R + + +++DG+ L D ++ + Sbjct: 371 NGTVVDHRLPKSEDGPNALEEIMDGEGLLHDIIEPLRLQE 410 >gi|20799561|gb|AAM28548.1|AF494518_1 peptide releasing factor 1 [Tomato big bud phytoplasma] Length = 269 Score = 99.1 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 85/275 (30%), Positives = 134/275 (48%), Gaps = 19/275 (6%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKM--LMRERQHLDNAISFIKEIQDRLCDN 69 +FD + ++ K + N + L++E L + +E + Sbjct: 1 MFDKLELIKKKYLQNQKKILE-----NPKNFQNINLLKEMNKLQKIVFAYEEYIQLKKEY 55 Query: 70 LILL------ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS----NDAYL 119 + + E++ L E N IK++ + Q E LL + + D + Sbjct: 56 KTIQKTLSQXNDKILEEEIIQLAEXEKNNLIIKIKXKTNQLEKLLYPDQYNAEDKQDVIV 115 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 E+ G GG E+ + + L R Y ++ E +K+K E + + + GI S +I G N + Sbjct: 116 EIKKGIGGQEANLFVSDLFRAYKKYIEYKKWKLEIINLLSTSKEGISSVEFVINGKNVFY 175 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 +LK E G+HR+ RI ++ R HTS I V P + +IEI+ +D R+DT+ ASG G Sbjct: 176 YLKYESGIHRVQRIPKTENKGRIHTSTVKILVIPNNNHQ-KIEINWNDIRVDTFNASGPG 234 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 GQ VNTT SAVR+TH+PTG+ CQ +SQH NK Sbjct: 235 GQSVNTTKSAVRLTHLPTGISSSCQIAKSQHDNKE 269 >gi|407639|gb|AAD12326.1| unknown [Mycoplasma genitalium] Length = 113 Score = 99.1 bits (245), Expect = 8e-19, Method: Composition-based stats. Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 6/113 (5%) Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 T+SAVRITH+PTG+VV CQ+ +SQ N+ +A MLRAKL+E K+ K++ Sbjct: 1 TESAVRITHLPTGIVVACQEGKSQFSNRDKAMKMLRAKLWENAQNKQLSTQADL--RKSQ 58 Query: 306 IGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 +G G + IR+Y P + D R + + V+ GDLD+ ++A A ++ Sbjct: 59 VGSGERAEKIRTYNY-PQNRITDHRIKLTINKLNTVILGDLDEIIEALQADER 110 >gi|225714246|gb|ACO12969.1| Peptide chain release factor 1 [Lepeophtheirus salmonis] Length = 352 Score = 98.7 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 79/330 (23%), Positives = 134/330 (40%), Gaps = 36/330 (10%) Query: 33 PHLWQNVI--EAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90 P + E+ L E + + S I +Q L + L +A EE D Sbjct: 24 PEFINYIKDIESSPLRHENKLFNVLRSDIYALQTGLQEIEALKSMAQEEKDFEKEVLEDL 83 Query: 91 NLQRIKLEVEYKQFES---LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147 + +++ + + + + D ++A LEV GAGG E+ +A + +Y + Sbjct: 84 SKLEPQVDELVTRLANNILISNQRYDQDNAVLEVLPGAGGLEASVFAAEVFNLYCSYCRD 143 Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 ++ H + G + R TS Sbjct: 144 YLGYNVEVQEHVETTGASDYFAISKASILIKG-----------------SKSDRLQTSTR 186 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 S+ V P++ D I+++ SD + R+SG GGQ VNTT+SAVR+ H PT + CQ+ R Sbjct: 187 SLSVLPLLTDFSRIDVNPSDLSVTYCRSSGPGGQGVNTTNSAVRMIHNPTKISAHCQELR 246 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVK 324 + H+N A L+ +LY + +K E + + + K++IG +IR+Y V Sbjct: 247 TAHENYGLALEKLKRELYRVMFEK--ENSKVSSTRKSQIGQMNRNEKIRTYHYG-RNTVL 303 Query: 325 DLRTN---IEKTSPSDVLDGD-----LDDF 346 D R + + D + G+ LD F Sbjct: 304 DHRIQGVVKQVPNLFDFMKGEYGFTILDQF 333 >gi|124808906|ref|XP_001348439.1| peptide chain release factor 1, putative [Plasmodium falciparum 3D7] gi|23497333|gb|AAN36878.1|AE014820_28 peptide chain release factor 1, putative [Plasmodium falciparum 3D7] Length = 304 Score = 98.7 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 70/245 (28%), Positives = 112/245 (45%), Gaps = 17/245 (6%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 + N +E G GG E+ W+ LL Y +AE+ K K E ++ L Sbjct: 60 NDNKNFIRIEFRPGVGGEEAFTWSKELLNTYKLFAERNKCKVEKIQDISDSLVISSKENL 119 Query: 171 LIKGP------NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 I N Y K E G+H++ RI DS +R H+S +++ ++ + + EI+ Sbjct: 120 RIIKEDKQIEINLYDLFKNESGIHQVKRIPKNDSKNRIHSSTATVAIFFHKKEEPKYEIN 179 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 D +I T+R+S GGQ+VN +S V I H PTG+ +CQ+ER+Q NK A L K+ Sbjct: 180 LKDLKISTFRSSKPGGQNVNKIESGVCILHKPTGIQTECQEERTQELNKKLAMKRLIQKI 239 Query: 285 YELELQKREEIANIGESSK-TEIGWGRQIRSYVLQPYQMVKDLRTN--------IEKTSP 335 +E +++E + + E +IR+Y + D N EK Sbjct: 240 QHMESKEKENMVQHERAKLIKESNRSNRIRTYNFF-RGYITDH-INKKKIDLIYFEKGKL 297 Query: 336 SDVLD 340 +L+ Sbjct: 298 EYILN 302 >gi|10092253|gb|AAG12666.1|AC027033_1 peptide chain release factor, putative; 62597-62246 [Arabidopsis thaliana] Length = 88 Score = 98.7 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 39/81 (48%), Positives = 52/81 (64%) Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330 NKA A +L++ L +LE+ ++ + S TEI WG QIR+YVL Y+MVKDLRTN Sbjct: 1 MNKASAMAVLQSWLDQLEMARQTSVNAQHTRSLTEISWGNQIRTYVLHQYRMVKDLRTNY 60 Query: 331 EKTSPSDVLDGDLDDFMKATL 351 E + P VL+GDLD F+ L Sbjct: 61 EVSDPDSVLEGDLDGFISKLL 81 >gi|116248645|gb|ABJ90461.1| peptide chain release factor 1 [Pseudoalteromonas haloplanktis] Length = 158 Score = 98.7 bits (244), Expect = 1e-18, Method: Composition-based stats. Identities = 77/158 (48%), Positives = 108/158 (68%) Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY+R+AE +K+K E + ++GE G K I G YG LK E GVHR+ R+ +S Sbjct: 1 MYSRYAEDKKWKVEVVSTNEGEHGGYKEVIANISGEGVYGQLKFESGVHRVQRVPETESQ 60 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS ++ V V ++ I+I+ +D ++DT+RASGAGGQHVN TDSA+R+THIPTGV Sbjct: 61 GRVHTSACTVAVMAEVPEAEAIQINTADLKVDTFRASGAGGQHVNKTDSAIRLTHIPTGV 120 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 VV+CQ +RSQHKN+A+A ++L A+L + E +KR Sbjct: 121 VVECQDQRSQHKNRAKAMSVLAARLQQAEDEKRHAAEA 158 >gi|124511698|ref|XP_001348982.1| peptide chain release factor, putative [Plasmodium falciparum 3D7] gi|23498750|emb|CAD50820.1| peptide chain release factor, putative [Plasmodium falciparum 3D7] Length = 352 Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats. Identities = 50/137 (36%), Positives = 75/137 (54%), Gaps = 2/137 (1%) Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + I++SD I T R+ G GGQ+VN ++AVRI H PT + V+ ER+Q NK A Sbjct: 215 KMNDFVINKSDLVIQTMRSGGKGGQNVNKVETAVRILHKPTNISVKASSERTQLLNKRNA 274 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336 + KL L+ + + ++K+ +G QIR+YVL +M+KD RTN+ T Sbjct: 275 LKRIYEKLLYLQTE-ALKNKKYELANKSLTHFGEQIRNYVLYGNKMIKDTRTNVFSTDID 333 Query: 337 DVL-DGDLDDFMKATLA 352 VL G++D F+ A Sbjct: 334 KVLYQGEIDIFIDAYQK 350 >gi|294894730|ref|XP_002774927.1| peptide chain release factor 1, putative [Perkinsus marinus ATCC 50983] gi|239880702|gb|EER06743.1| peptide chain release factor 1, putative [Perkinsus marinus ATCC 50983] Length = 272 Score = 97.6 bits (241), Expect = 3e-18, Method: Composition-based stats. Identities = 66/259 (25%), Positives = 110/259 (42%), Gaps = 21/259 (8%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + D++D +E+ G GG E+ W + M R+A + +++ + Sbjct: 11 WHAYVKDASDCTVEIRPGVGGVEAGKWCKDIFDMLERFAGIMGWAAPEVKVMEQG----- 65 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS---IEIEI 223 +G+LK E G+HR+ R+ + ++S TS S+ V P D + I + Sbjct: 66 --VKRTPEKGIFGYLKFEAGIHRVQRVPSWPADSLPQTSACSVVVLPREDPNSNLIPVLK 123 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 T ++SG GGQ VN AVRI HI +GV R+ NKA A + K Sbjct: 124 PHEYKVWITKKSSGPGGQCVNAAHQAVRIRHIESGVEGFADCYRALKSNKALALQQVSQK 183 Query: 284 LYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLR---TNIEKTSPSD 337 + E + +K + I K +G G +IRSY V D R + + + Sbjct: 184 IMEEKGKKIAKERGII--RKQHMGSGDRSEKIRSYNYL-NGTVVDHRLPKSEDGPNALEE 240 Query: 338 VLDGD--LDDFMKATLAIK 354 ++DG+ L D ++ + Sbjct: 241 IMDGEGLLHDIIEPLRLQE 259 >gi|149003371|ref|ZP_01828260.1| peptide chain release factor 2 [Streptococcus pneumoniae SP14-BS69] gi|147758554|gb|EDK65552.1| peptide chain release factor 2 [Streptococcus pneumoniae SP14-BS69] Length = 165 Score = 97.2 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 65/165 (39%), Positives = 90/165 (54%), Gaps = 2/165 (1%) Query: 27 NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 K +P W + I A+ +E L N + ++++ + ILL+ E++ Sbjct: 2 ENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHDEL 61 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 + + LLS D N+A LE+H G+GGTE+QDW +MLLRMYTR+ Sbjct: 62 VAQLAELD--KIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGN 119 Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + FK E L+ G+EAGIKS TL +GPNAYG LK E GVHRLV Sbjct: 120 AKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLV 164 >gi|222872913|gb|EEF10044.1| predicted protein [Populus trichocarpa] Length = 245 Score = 97.2 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 45/83 (54%), Positives = 57/83 (68%), Gaps = 1/83 (1%) Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 +PTG+VVQCQ RSQH N+ AW LR+KLYE E+QKR E +KT++GWG QIRS Sbjct: 1 MPTGIVVQCQDGRSQHSNRDVAWQRLRSKLYEHEMQKRMVEQQKLEDTKTDVGWGHQIRS 60 Query: 315 YVLQPYQMVKDLRTNIEKTSPSD 337 YVL +KDLRTN+E ++ Sbjct: 61 YVLD-NSRIKDLRTNVEISATQK 82 >gi|221060184|ref|XP_002260737.1| Peptide chain release factor [Plasmodium knowlesi strain H] gi|193810811|emb|CAQ42709.1| Peptide chain release factor, putative [Plasmodium knowlesi strain H] Length = 263 Score = 96.4 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 8/240 (3%) Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 + V + N +E G GG E+ W+ LL Y +AE+ + E Sbjct: 1 MRRSSVLNLHVRKEDPSVQNKNCVRIEFRPGVGGEEAFLWSTELLNTYKAFAERINCRVE 60 Query: 154 ALE------IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 + + + Y LK E G+H++ R+ +S + H+S + Sbjct: 61 RVHDASESLLVVSPSDVCITQEGYEIKTTLYDLLKNESGIHQVKRVPRNESKGKIHSSTA 120 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 +I V+ D+ + EI+ D RI T+R+S GGQ+VN +S V I H PTG+ +CQ+ER Sbjct: 121 TIAVFLHEDEQKKDEINLKDLRITTFRSSKPGGQNVNKIESGVSILHKPTGIKTECQEER 180 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQIRSYVLQPYQMVKDL 326 +Q NK A L K+ + ++ EE + + +IR+Y + D Sbjct: 181 TQEMNKKIAMKRLIQKVLQFRHKQSEEELRGERAKLIKDSSRSSRIRTYNFF-RGYITDH 239 >gi|119513510|ref|ZP_01632531.1| peptide chain release factor 2 [Nodularia spumigena CCY9414] gi|119461826|gb|EAW42842.1| peptide chain release factor 2 [Nodularia spumigena CCY9414] Length = 66 Score = 96.4 bits (238), Expect = 6e-18, Method: Composition-based stats. Identities = 32/57 (56%), Positives = 39/57 (68%) Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 E WG QIR+YV PYQMVKDLRTN+E T+ SDV+DGDLD F++A L + Sbjct: 1 EIRGDMVEASWGNQIRNYVFHPYQMVKDLRTNVETTAISDVMDGDLDSFIQAYLRQE 57 >gi|332213667|ref|XP_003255946.1| PREDICTED: peptide chain release factor 1-like, mitochondrial isoform 2 [Nomascus leucogenys] Length = 271 Score = 95.6 bits (236), Expect = 9e-18, Method: Composition-based stats. Identities = 76/208 (36%), Positives = 105/208 (50%), Gaps = 1/208 (0%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L I + E + L + LL E+ E + + I + S Sbjct: 63 ELLAVIKLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A+ Sbjct: 123 ETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASA 182 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G AY +K E GVHR+ R+ + R HTS ++ + P I + I+ D RI Sbjct: 183 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILP-QPTEINLVINPKDLRI 241 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTG 258 DT RASGAGGQHVNTTDSAVRI H+PT Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTD 269 >gi|156101992|ref|XP_001616689.1| peptide chain release factor 1 [Plasmodium vivax SaI-1] gi|148805563|gb|EDL46962.1| peptide chain release factor 1, putative [Plasmodium vivax] Length = 263 Score = 95.6 bits (236), Expect = 1e-17, Method: Composition-based stats. Identities = 64/240 (26%), Positives = 107/240 (44%), Gaps = 8/240 (3%) Query: 94 RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153 + V + + + N +E G GG E+ W+ LL Y +AE+ + E Sbjct: 1 MRRRRVLHLHVKKEDPSVKNKNCIRIEFRPGVGGEEALLWSRELLNTYKTFAERMNCRVE 60 Query: 154 ALE------IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207 + + + + Y K E G+H++ R+ +S + H+S + Sbjct: 61 RVHDAGESLVVTSPSDVCIAKQGQEIKASLYDLFKNESGIHQVKRVPRNESKGKIHSSTA 120 Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 +I V+ D+ + E++ D RI T+R+S GGQ+VN +S V I H PTG+ +CQ+ER Sbjct: 121 TIAVFLHTDEHRKDEVNLKDLRIKTFRSSKPGGQNVNKIESGVSILHKPTGMQTECQEER 180 Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESS-KTEIGWGRQIRSYVLQPYQMVKDL 326 +Q NK A L K+ L ++ EE S + R+IR+Y + D Sbjct: 181 TQEMNKKIALKRLTEKISHLRHKQSEEQLRRERSKLVKDSSRSRRIRTYNFF-RGYITDH 239 >gi|119568099|gb|EAW47714.1| mitochondrial translational release factor 1-like, isoform CRA_c [Homo sapiens] Length = 271 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 76/208 (36%), Positives = 105/208 (50%), Gaps = 1/208 (0%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L I + E + L + LL E+ E + + I + S Sbjct: 63 ELLAVIKLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A+ Sbjct: 123 ETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASA 182 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G AY +K E GVHR+ R+ + R HTS ++ + P I + I+ D RI Sbjct: 183 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILP-QPTEINLVINPKDLRI 241 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTG 258 DT RASGAGGQHVNTTDSAVRI H+PT Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTD 269 >gi|332825293|ref|XP_003311599.1| PREDICTED: mitochondrial translational release factor 1-like [Pan troglodytes] Length = 281 Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 77/208 (37%), Positives = 106/208 (50%), Gaps = 1/208 (0%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L I + E + L + LL E+ E + + I + S Sbjct: 63 ELLAVIRLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A+ Sbjct: 123 ETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASA 182 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G AY +K E GVHR+ R+ + R HTS ++ + P I + I+ D RI Sbjct: 183 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILP-QPTEINLVINPKDLRI 241 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTG 258 DT RASGAGGQHVNTTDSAVRI H+PTG Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTG 269 >gi|325067255|ref|ZP_08125928.1| peptide chain release factor 1 [Actinomyces oris K20] Length = 397 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 79/179 (44%), Positives = 105/179 (58%), Gaps = 7/179 (3%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + DS D +EV AG GG ES +A+ L RMY+R+AE++ + E L+ D + G K Sbjct: 206 VPRDPDDSRDVIIEVKAGEGGEESALFASDLARMYSRYAERQGWAVEVLDATDSDLGGYK 265 Query: 167 SATLLI-------KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219 L I + LK E GVHR+ R+ +S R HTS + + V P DD Sbjct: 266 DVRLAIKARGPVEPQDGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGVLVMPEADDPG 325 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 E++I +D RID +R+SG GGQ VNTTDSAVRITH+PTG+VV Q E+SQ +NK A Sbjct: 326 ELQIDAADLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSMQNEKSQLQNKEAAMR 384 >gi|302823050|ref|XP_002993180.1| hypothetical protein SELMODRAFT_431302 [Selaginella moellendorffii] gi|300139071|gb|EFJ05820.1| hypothetical protein SELMODRAFT_431302 [Selaginella moellendorffii] Length = 221 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 56/94 (59%), Gaps = 4/94 (4%) Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324 +ERSQ +NK +A +L++KL + +++ + WG++IR+YV PY++V Sbjct: 18 KERSQLENKIKAIALLKSKLLVILEEQKAAEIKEIRGDVVKAEWGQEIRNYVFHPYRLVH 77 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKAT----LAIK 354 DLRTN+E + S ++DG+++ + A LA + Sbjct: 78 DLRTNVETSDISGIMDGNVEPLLTAYLISSLAWR 111 >gi|221054928|ref|XP_002258603.1| peptide release factor [Plasmodium knowlesi strain H] gi|193808672|emb|CAQ39375.1| peptide release factor, putative [Plasmodium knowlesi strain H] Length = 407 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 70/334 (20%), Positives = 140/334 (41%), Gaps = 20/334 (5%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLILLE 74 + ++ + + L ++ L +E +D ++ I+E++ + Sbjct: 54 QKITKIQERSKILK--TLHDDLDVYTELFQESGFIDGGLNPDKTIQEVKSSSLMDTDDDI 111 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 L + + V + D+ + +E+ G GG E++ + Sbjct: 112 KELLRTIEDVGSLLLQEVVDFYKSVVNTE------HHLDTEEVKVEITPGVGGLEAKLFC 165 Query: 135 NMLLRMYTRWAEKRKFKTEALE-IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 N L MY ++ +++ F+ ++ + + G +S +IKG Y E G+HR+ RI Sbjct: 166 NDLFSMYEQFCKEKNFQCNLIKGESEDTKDGYRSIVAIIKGERVYEHFVQENGIHRVQRI 225 Query: 194 SPYDSNSRRHTSFSSIWVYP----VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 ++ + TS S ++V ++ ++D I+T R+ GAGGQ VN ++ Sbjct: 226 P--VNSKKIQTSTSVVFVSDEESLKKKIQKKMNFGKNDLLIETKRSGGAGGQSVNKNETC 283 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGW 308 V+I H PT + V+ Q+ SQ +N++ A L+ KL+ Q+++ +S K Sbjct: 284 VKILHKPTNLSVEVQKTSSQIQNRSMAIQALKNKLFSFYYQQEKDLYFKYKKSHKMSGDR 343 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342 +IR+Y + D N++ GD Sbjct: 344 SEKIRTYNFV-GNFITDHLRNVQYPGIDLFFRGD 376 >gi|166795305|ref|NP_001107656.1| peptide chain release factor 1-like, mitochondrial isoform b [Homo sapiens] gi|15680165|gb|AAH14428.1| MTRF1L protein [Homo sapiens] gi|56203459|emb|CAI18898.1| mitochondrial translational release factor 1-like [Homo sapiens] gi|193787809|dbj|BAG53012.1| unnamed protein product [Homo sapiens] Length = 271 Score = 94.9 bits (234), Expect = 2e-17, Method: Composition-based stats. Identities = 76/208 (36%), Positives = 105/208 (50%), Gaps = 1/208 (0%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L I + E + L + LL E+ E + + I + S Sbjct: 63 ELLAVIKLLNEKERELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A+ Sbjct: 123 ETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASA 182 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G AY +K E GVHR+ R+ + R HTS ++ + P I + I+ D RI Sbjct: 183 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILP-QPTEINLVINPKDLRI 241 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTG 258 DT RASGAGGQHVNTTDSAVRI H+PT Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTD 269 >gi|114609871|ref|XP_001140771.1| PREDICTED: mitochondrial translational release factor 1-like isoform 5 [Pan troglodytes] Length = 271 Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 76/208 (36%), Positives = 105/208 (50%), Gaps = 1/208 (0%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L I + E + L + LL E+ E + + I + S Sbjct: 63 ELLAVIRLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D ND LEV AG GG E+ + + + MY ++A +++ E LE E G++ A+ Sbjct: 123 ETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASA 182 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G AY +K E GVHR+ R+ + R HTS ++ + P I + I+ D RI Sbjct: 183 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILP-QPTEINLVINPKDLRI 241 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTG 258 DT RASGAGGQHVNTTDSAVRI H+PT Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTD 269 >gi|226510582|ref|NP_001146175.1| hypothetical protein LOC100279745 [Zea mays] gi|219886065|gb|ACL53407.1| unknown [Zea mays] Length = 184 Score = 93.7 bits (231), Expect = 4e-17, Method: Composition-based stats. Identities = 59/167 (35%), Positives = 103/167 (61%), Gaps = 3/167 (1%) Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 MY R+ E+ +K + + + E G K+ + +KG Y LK E GVHR+ R+ ++ Sbjct: 1 MYQRYCERNNWKFKPVSCSEAEMGGYKTYVMEVKGKQVYSKLKFESGVHRVQRVPLTEAM 60 Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 R HTS +++ + P D +++ I D + T R+ GAGGQ+VN ++AV + H PTG+ Sbjct: 61 GRVHTSTATVAIMP-EADEVDVVIDPKDIELKTARSGGAGGQNVNKVETAVDLIHKPTGI 119 Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 + C +ERSQ +N+ +A+ +LRAKLYE++L++++E ++ K ++ Sbjct: 120 RIFCTEERSQLQNRERAFQLLRAKLYEIKLREQQE--SLRNQRKLQV 164 >gi|302781616|ref|XP_002972582.1| hypothetical protein SELMODRAFT_97037 [Selaginella moellendorffii] gi|300160049|gb|EFJ26668.1| hypothetical protein SELMODRAFT_97037 [Selaginella moellendorffii] Length = 163 Score = 93.3 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 61/144 (42%), Positives = 88/144 (61%), Gaps = 13/144 (9%) Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R HTS +S+ + P + ++++I + +IDTYRA GA GQHVNTT SAVR+TH+PTG+V Sbjct: 1 RIHTSTASVAILP-EVNEVDVDIRNDEIKIDTYRAGGADGQHVNTTCSAVRVTHVPTGIV 59 Query: 261 VQCQQERSQH------KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311 V Q ERS+H +NKA+A ++L A+LYELE + A+ E + +IG + Sbjct: 60 VAIQDERSRHKEGPSARNKAKALSILYARLYELERSR--AAASRSELQQDQIGSSDRSES 117 Query: 312 IRSYVLQPYQMVKDLRTNIEKTSP 335 IR+Y P V D R + + S Sbjct: 118 IRTYNF-PQDRVTDHRVGVTQHSI 140 >gi|82538743|ref|XP_723804.1| peptide chain release factor 1 [Plasmodium yoelii yoelii str. 17XNL] gi|23478225|gb|EAA15369.1| peptide chain release factor 1 [Plasmodium yoelii yoelii] Length = 358 Score = 93.3 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 68/306 (22%), Positives = 130/306 (42%), Gaps = 7/306 (2%) Query: 41 EAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE 100 + + + L A + + L +N+ L L +E+ I ++ +K + Sbjct: 24 KITKIQNMSKQLKIAWEELDIYKQLLTENMKL-TLRKDEESKKIDTINFNDYSEVKEIIY 82 Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE--IH 158 + + + + G GG E++ +AN L MY + + + ++ + Sbjct: 83 NLENICDSIVKQLLDIYTNFIVPGVGGQEAKMFANELFSMYEHFCKLKNYECLIKNNKLI 142 Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD- 217 + + K+ IKG Y E G+HR+ RI + TS ++ + Sbjct: 143 EEGKGIYKNIVADIKGEGVYIDFIQEIGIHRVQRIPINSKKMQTSTSIVLLFDEKQTKEK 202 Query: 218 -SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 +++I +++ I+T R+ GAGGQ VN ++ V+I H PT + V+ Q+ SQ +NK+ A Sbjct: 203 LEKKMKIPKNEFLIETKRSGGAGGQSVNKNETCVKIIHKPTNIFVEVQKTSSQIQNKSIA 262 Query: 277 WNMLRAKLYE-LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 M++ KLY Q++ ++ K +IR+Y + V D N++ T Sbjct: 263 MEMIKNKLYNFYYEQEKINFLKDKKNQKQNGDRSEKIRTYNFS-HNTVIDHIANVQYTGI 321 Query: 336 SDVLDG 341 G Sbjct: 322 DQFFKG 327 >gi|213616409|ref|ZP_03372235.1| hypothetical protein SentesTyp_18844 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 65 Score = 92.9 bits (229), Expect = 6e-17, Method: Composition-based stats. Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 1/64 (1%) Query: 290 QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349 QK+ E +K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A Sbjct: 1 QKKNAEKQAMEDTKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEA 59 Query: 350 TLAI 353 +L Sbjct: 60 SLKA 63 >gi|71900159|ref|ZP_00682300.1| PCRF [Xylella fastidiosa Ann-1] gi|71730108|gb|EAO32198.1| PCRF [Xylella fastidiosa Ann-1] Length = 270 Score = 92.6 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 1/168 (0%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R L DP + + + RE L + + E D L Sbjct: 9 LEALAERHEELERLLSDPKIASDTDRFRTYSRELAQLAPIATTLAEETRTKADLAAAETL 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + ++ Q ++ + Q + D + +LEV AG GG E+ +A Sbjct: 69 RTDPEMRELAEQEIAIAQAHLTTLDEQLQRLLIPQDPRDECNLFLEVRAGTGGDEAAIFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 L RMYTR+AE++++K E GE G K I G AY LK Sbjct: 129 GNLFRMYTRYAERQRWKVEVESDTPGEHGGYKEIIARIVGRGAYSRLK 176 >gi|221133260|ref|XP_002171178.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] Length = 205 Score = 91.8 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 72/204 (35%), Positives = 121/204 (59%), Gaps = 3/204 (1%) Query: 68 DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGA 125 + + L L ++ + + + ++ + + + + DSN+A +E+ AG Sbjct: 1 EIIELAALGIDNKEMKEFVQEEISACQVCIADLELRLLDSIIPKDKDDSNNAIMEIRAGT 60 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A +L MY +++ ++K E L+ + + G+K ++ I G +G LK E Sbjct: 61 GGREAAIFAAEMLSMYDKYSSSNQWKFEVLDESESTDGGLKEVSVNIIGSGVFGKLKHEI 120 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 GVHR+ R+ +S R HTS ++ V P +SI++ ++ D ++DT+R+SGAGGQHVNT Sbjct: 121 GVHRVQRVPITESLGRVHTSTVTVAVLP-QPESIDVVLNMKDVKVDTFRSSGAGGQHVNT 179 Query: 246 TDSAVRITHIPTGVVVQCQQERSQ 269 TDSAVR+THIP+G+VV Q +RSQ Sbjct: 180 TDSAVRLTHIPSGLVVAVQSQRSQ 203 >gi|23010857|ref|ZP_00051405.1| COG1186: Protein chain release factor B [Magnetospirillum magnetotacticum MS-1] Length = 136 Score = 91.4 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 94/110 (85%), Positives = 104/110 (94%) Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 +HRLVRISPYDSN+RRHTSF+S+WVYPV+DD IEIEI ESDCRIDTYR+SGAGGQHVNTT Sbjct: 1 MHRLVRISPYDSNARRHTSFASVWVYPVIDDRIEIEIKESDCRIDTYRSSGAGGQHVNTT 60 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 DSAVRITH PTG+VV CQQERSQHKN+A AWNMLRA+LYELEL+KREE A Sbjct: 61 DSAVRITHNPTGIVVACQQERSQHKNRATAWNMLRARLYELELKKREEKA 110 >gi|301344980|ref|ZP_07225721.1| peptide chain release factor 1 [Acinetobacter baumannii AB056] gi|301513510|ref|ZP_07238747.1| peptide chain release factor 1 [Acinetobacter baumannii AB058] gi|301597421|ref|ZP_07242429.1| peptide chain release factor 1 [Acinetobacter baumannii AB059] Length = 127 Score = 91.4 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 45/112 (40%), Positives = 65/112 (58%), Gaps = 6/112 (5%) Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H+N TDSAVRITHIPTG VV+CQ+ERSQHKNKA+A +L ++L + A E Sbjct: 1 HINKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKR--AAADAATSEM 58 Query: 302 SKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350 + +G G +IR+Y P + D R N+ +++GDL + + + Sbjct: 59 RRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 109 >gi|253730877|ref|ZP_04865042.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253725386|gb|EES94115.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 59 Score = 91.0 bits (224), Expect = 3e-16, Method: Composition-based stats. Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%) Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 E +K++IGWG QIRSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 2 KAMEGNKSDIGWGNQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 57 >gi|255024491|ref|ZP_05296477.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-208] Length = 165 Score = 90.6 bits (223), Expect = 3e-16, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 64/161 (39%), Gaps = 4/161 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R LN DP + + + L +E+ + + +E ++ EL Sbjct: 5 LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQINETKEL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131 E+ D + + + L ++ E + + D + LE+ AGG E+ Sbjct: 65 LGEKLDDEMREMAKEELAELQKEKADLEERLKLLLVPKDPNDDKNVILEIRGAAGGDEAA 124 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 +A L RMY+++AE R +K E ++ + G K ++ Sbjct: 125 LFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMM 165 >gi|82540995|ref|XP_724771.1| peptide chain release factor 1 [Plasmodium yoelii yoelii str. 17XNL] gi|23479536|gb|EAA16336.1| peptide chain release factor 1 [Plasmodium yoelii yoelii] Length = 2075 Score = 90.2 bits (222), Expect = 4e-16, Method: Composition-based stats. Identities = 62/221 (28%), Positives = 111/221 (50%), Gaps = 9/221 (4%) Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 + N +E +G GG E++ W+N L ++Y +AEK+K ++++ + I Sbjct: 1835 NKNHVRIEFRSGIGGDEAELWSNELKKIYQNYAEKKKCTVKSVKDATNSLIIKSPNDVKI 1894 Query: 173 KGP------NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 + Y K E G+H++ RI ++ + +S ++I V+ + D + + EI+ Sbjct: 1895 NKEGEEIQISLYDLFKNESGIHQVKRIPKNENKEKIQSSTATIAVF-IQDYANKYEINSK 1953 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D +I T+R+S GGQ+VN +SAVRI H TG+ + Q+ER+Q NK A L K+++ Sbjct: 1954 DLKIMTFRSSKPGGQNVNKIESAVRIVHTHTGIQAESQKERTQELNKKIAMKKLTQKIHD 2013 Query: 287 LE-LQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326 L +K + + N + +IR+Y + D Sbjct: 2014 LRNREKEQSLQNERSKFTKDCSRSNRIRTYNFFT-GYITDH 2053 >gi|289178305|gb|ADC85551.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bifidobacterium animalis subsp. lactis BB-12] Length = 115 Score = 89.9 bits (221), Expect = 5e-16, Method: Composition-based stats. Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 6/106 (5%) Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GW 308 +THIPTG+VV Q E+SQ +N+A A +L+++L L ++ +E A + +++ Sbjct: 1 MTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLDR 58 Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 +IR+Y P + D RTN + + VLDGDL + + + Sbjct: 59 SERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 103 >gi|239982309|ref|ZP_04704833.1| peptide chain release factor 1 [Streptomyces albus J1074] Length = 241 Score = 89.1 bits (219), Expect = 9e-16, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 64/219 (29%), Gaps = 4/219 (1%) Query: 12 GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 +F+ + + + + + DP + + A+ L + L + + + D Sbjct: 18 KMFEAVEELIGEHADIEKRLADPAVHADQAGARKLNKRYAELTPIVGTYRSWKQTGEDIE 77 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 EL DD E + + E + + +D D LE+ AGAGG ES Sbjct: 78 TAREL--AADDPDFAAEVKELEAAREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDES 135 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 +A LLR RW G +SA P + R Sbjct: 136 ALFAGDLLRPPRRW-RGDGGAHRPAARPRRPGPGCRSAAGSPAAPRTPPARRPWPASSRR 194 Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + R W +P S Sbjct: 195 PWRASAPVRRRPRPRRYGPWRWPGASAWRPPARSWPGRP 233 >gi|291454153|ref|ZP_06593543.1| peptide chain release factor 1 [Streptomyces albus J1074] gi|291357102|gb|EFE84004.1| peptide chain release factor 1 [Streptomyces albus J1074] Length = 223 Score = 88.7 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 64/218 (29%), Gaps = 4/218 (1%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + + + + + DP + + A+ L + L + + + D Sbjct: 1 MFEAVEELIGEHADIEKRLADPAVHADQAGARKLNKRYAELTPIVGTYRSWKQTGEDIET 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EL DD E + + E + + +D D LE+ AGAGG ES Sbjct: 61 AREL--AADDPDFAAEVKELEAAREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESA 118 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 +A LLR RW G +SA P + R Sbjct: 119 LFAGDLLRPPRRW-RGDGGAHRPAARPRRPGPGCRSAAGSPAAPRTPPARRPWPASSRRP 177 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + R W +P S Sbjct: 178 WRASAPVRRRPRPRRYGPWRWPGASAWRPPARSWPGRP 215 >gi|195351215|ref|XP_002042131.1| GM10257 [Drosophila sechellia] gi|194123955|gb|EDW45998.1| GM10257 [Drosophila sechellia] Length = 166 Score = 88.7 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 51/141 (36%), Positives = 75/141 (53%), Gaps = 5/141 (3%) Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 I++ I+E D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+ Sbjct: 1 PRPADIQVHIAEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNR 60 Query: 274 AQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT-NIE 331 A LR++L + +L+ E ++ + + +IR+Y + D R Sbjct: 61 ELAMKRLRSRLVQQQLESVEASKMATKKAQQGSLNRNEKIRTYNFV-QDRITDHRIQGGT 119 Query: 332 KTSPSDVLDG--DLDDFMKAT 350 + L G L ++ Sbjct: 120 LHNLDGFLKGGDQLSGLIEKL 140 >gi|261885046|ref|ZP_06009085.1| peptide chain release factor 2 [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 83 Score = 88.3 bits (217), Expect = 2e-15, Method: Composition-based stats. Identities = 36/79 (45%), Positives = 50/79 (63%), Gaps = 2/79 (2%) Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336 L+++LYE EL K++E N E K+EIGWG QIRSYVL PYQ VKD R+ + Sbjct: 1 MKWLKSRLYEFELMKQQEANNAIE--KSEIGWGHQIRSYVLFPYQQVKDTRSGEAYSQTD 58 Query: 337 DVLDGDLDDFMKATLAIKK 355 +LDGD+ +++ L +K Sbjct: 59 AILDGDIKKIIESVLISQK 77 >gi|323333643|gb|EGA75036.1| Mrf1p [Saccharomyces cerevisiae AWRI796] Length = 311 Score = 87.9 bits (216), Expect = 2e-15, Method: Composition-based stats. Identities = 71/250 (28%), Positives = 109/250 (43%), Gaps = 15/250 (6%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 + L L+ + +V + + L E +++L + L E+ Sbjct: 58 EKYEAELKDLDKDLSC-GIHFDVNK----QKHYAKLSALTDTFIEYKEKLNELKSLQEMI 112 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQF--ESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + E + E + + L + LE+ G GG E+ + Sbjct: 113 VSDPSLRAEAEQEYAELVPQYETTSSRLVNKLLPPHPFADKPSLLELRPGVGGIEAMIFT 172 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 LL MY +A RK+K + ++ E GI A L I+ +Y L+ E GVHR+ RI Sbjct: 173 QNLLDMYIGYANYRKWKYRIISKNENESGSGIIDAILSIEEAGSYDRLRFEAGVHRVQRI 232 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSI-------EIEISESDCRIDTYRASGAGGQHVNTT 246 ++ R HTS +++ V P + D E + R+D RASG GGQHVNTT Sbjct: 233 PSTETKGRTHTSTAAVVVLPQIGDESAKSIDAYERTFKPGEIRVDIMRASGKGGQHVNTT 292 Query: 247 DSAVRITHIP 256 DSAVR+THIP Sbjct: 293 DSAVRLTHIP 302 >gi|70951470|ref|XP_744973.1| peptide chain release factor 1 [Plasmodium chabaudi chabaudi] gi|56525140|emb|CAH78733.1| peptide chain release factor 1, putative [Plasmodium chabaudi chabaudi] Length = 260 Score = 87.6 bits (215), Expect = 3e-15, Method: Composition-based stats. Identities = 66/223 (29%), Positives = 112/223 (50%), Gaps = 9/223 (4%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 + N +E G GG E++ W+N L + Y +AEK+K ++++ + Sbjct: 18 NKNKNHIRIEFRPGIGGDEAELWSNELKKTYQNYAEKKKCSVKSVKDITNSIIIKSPTDV 77 Query: 171 LIKGP------NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 I + Y K E G H++ RI +S + H+S ++I ++ + DD+ + EI+ Sbjct: 78 QINKDGEEIQISLYDLFKNESGTHQVKRIPKNESKDKIHSSTATIAIF-IQDDADKYEIN 136 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 D +I T+R+S GGQ+VN +S VRI HIPTG+ + Q+ER+Q NK A L K+ Sbjct: 137 SKDLKIMTFRSSKPGGQNVNKIESGVRIVHIPTGIQTESQEERTQELNKRIAMKKLTQKI 196 Query: 285 YELELQKREEIANIGESS-KTEIGWGRQIRSYVLQPYQMVKDL 326 ++L +++EE S + +IR+Y + D Sbjct: 197 HDLRSREKEEELQNERSKLVKKCHRSSRIRTYNFFT-GYITDH 238 >gi|194699680|gb|ACF83924.1| unknown [Zea mays] Length = 174 Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 83/172 (48%), Positives = 115/172 (66%), Gaps = 1/172 (0%) Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 LLSG D A + + AGAGGT++QDWA+MLLRMY RW EK+++KT +E GEEAGI Sbjct: 3 QLLSGPYDKEGAVINISAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGI 62 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEIS 224 KSAT+ ++G AYG+L GE+G HR+VR SP+++ R TSF+ + V P + ++S+ ++I Sbjct: 63 KSATVELEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESMAVDIP 122 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 E D I RA G GGQ+VN ++AVR+ HIPTG+ V+C S Sbjct: 123 EEDLEISFTRAGGKGGQNVNKVETAVRMVHIPTGIAVRCSGIISHQFAFVLC 174 >gi|332878808|ref|ZP_08446523.1| putative peptide chain release factor H [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683159|gb|EGJ56041.1| putative peptide chain release factor H [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 235 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 4/204 (1%) Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLI 172 + +++ AG G E Q +L+++ + A ++ + +G+ IKS T+ + Sbjct: 1 MEEKIIQITAGRGPLECQWVVAKVLKVFLQEATQKGIDYTIVSREEGDANLTIKSVTVQL 60 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG +LK G V S + +R + ++ +D SE D + T Sbjct: 61 KGKELSAFLKSWLGTVCWVGKSTFRKFHQRSNWYIGVF---ELDQLQRQSFSERDVQFQT 117 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ G GGQ+VN +SAVR TH+PTGV V Q RSQ NK A N LR KL E+ELQ+ Sbjct: 118 TRSQGNGGQNVNKVNSAVRATHLPTGVSVFAQDSRSQLDNKKLALNRLREKLAEIELQQL 177 Query: 293 EEIANIGESSKTEIGWGRQIRSYV 316 E A ++ T++ G +R++ Sbjct: 178 AEQAQNHWNNHTQVQRGNPVRTFN 201 >gi|241205972|ref|YP_002977068.1| peptide chain release factor H [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859862|gb|ACS57529.1| peptide chain release factor H [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 204 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 93/197 (47%) Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180 + AG G E + LL + R A + E ++ G KSA + + G A Sbjct: 8 ITAGNGPVECRMALAALLGILEREAVRLGCSFETNLGPMPDQHGAKSAIVSLNGFEAEQI 67 Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240 G R S +R + S+ + E+ I +D R +T RA G GG Sbjct: 68 ANDYCGTIRFTFKSQVRPGHKRQNWYVSVQRIDTKPEGGEVTIDPADLRFETLRAGGPGG 127 Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 QH NTTDSAVR+ H PTG+V + ERSQH+NKA A L A L LE++K+E + Sbjct: 128 QHQNTTDSAVRVLHRPTGLVATARDERSQHRNKALALRRLEAMLRHLEVEKQEAAKSGRF 187 Query: 301 SSKTEIGWGRQIRSYVL 317 + I G +++S+ L Sbjct: 188 IANRTIERGNEVKSFKL 204 >gi|121730460|ref|ZP_01682775.1| conserved domain protein [Vibrio cholerae V52] gi|121627803|gb|EAX60412.1| conserved domain protein [Vibrio cholerae V52] Length = 156 Score = 86.8 bits (213), Expect = 5e-15, Method: Composition-based stats. Identities = 33/147 (22%), Positives = 60/147 (40%), Gaps = 3/147 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72 ++ V+R + DP + + + + L +E L+ + Q D + Sbjct: 9 LESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEM 68 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + E E I+ + Q L D + +LE+ AGAGG E+ Sbjct: 69 AQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHD 159 +A L RMY+R+AEK+ ++ E + + Sbjct: 129 FAGDLFRMYSRFAEKKGWRIEVMSSSE 155 >gi|156084766|ref|XP_001609866.1| peptide chain release factor 2 [Babesia bovis T2Bo] gi|154797118|gb|EDO06298.1| peptide chain release factor 2, putative [Babesia bovis] Length = 281 Score = 86.4 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 77/254 (30%), Positives = 114/254 (44%), Gaps = 24/254 (9%) Query: 80 DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139 D S+ ++K + L E D N + + AG GGTE+ D+ ML R Sbjct: 8 DTILCSVFLSNEHTKLKAKNASNSDLYLDLCEYDKNHCKVTITAGVGGTEAFDFCKMLGR 67 Query: 140 MYTRWAEKRKFKTEALEI----------------HDGEEAGIKSATLLIKGPNAYGWLKG 183 MY R+ + G++AG + + G AY KG Sbjct: 68 MYKRFIQHYCQPESWNRELYGDLPRSLHYVDGTVVPGDKAGYRILEFEVHGDYAYKLFKG 127 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYP--------VVDDSIEIEISESDCRIDTYRA 235 E+G HRLVR SPY++ +R T+FSS+ V P V ++E D ++T R+ Sbjct: 128 EKGTHRLVRNSPYNAMRKRQTTFSSVQVVPLLSADDRDVQHYESSKHVTEKDVIVETMRS 187 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 G GGQ+VN ++AVRITH TG+ V+ Q ERSQ +N+ A + + ++ E Sbjct: 188 GGKGGQNVNKVETAVRITHKKTGLSVRVQTERSQSQNREIAMRRISEMVDAHYKEQLREK 247 Query: 296 ANIGESSKTEIGWG 309 N + E WG Sbjct: 248 CNELRGEEVEADWG 261 >gi|213583753|ref|ZP_03365579.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 166 Score = 86.4 bits (212), Expect = 6e-15, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 1/158 (0%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 + + + QE ++ + + Q L D +A+LEV AG GG E+ +A Sbjct: 69 LDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 L RMY+R+AE R+++ E + + +GE G K I Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKI 166 >gi|207109382|ref|ZP_03243544.1| peptide chain release factor 1 [Helicobacter pylori HPKX_438_CA4C1] Length = 196 Score = 83.7 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 74/204 (36%), Positives = 106/204 (51%), Gaps = 10/204 (4%) Query: 55 AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114 + IKE ++ L D L ELA EE +Q++ + + D Sbjct: 3 VLENIKENKELLED-KELSELAKEELKILEIQKSDLETAIKQ--------LLIPKDPNDD 53 Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 + YLE+ AG GG E+ + L + Y R+A+ +K+K E + + G K LIKG Sbjct: 54 KNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKG 113 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 Y LK E G HR+ R+ +S R HTS ++ + P D +E+ I+ SD +I+ +R Sbjct: 114 KGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFR 172 Query: 235 ASGAGGQHVNTTDSAVRITHIPTG 258 A G GGQ VNTTDSAVRITH+PT Sbjct: 173 AGGHGGQCVNTTDSAVRITHLPTN 196 >gi|325114215|emb|CBZ49772.1| putative peptide chain release factor 1 [Neospora caninum Liverpool] Length = 489 Score = 83.7 bits (205), Expect = 4e-14, Method: Composition-based stats. Identities = 70/264 (26%), Positives = 109/264 (41%), Gaps = 33/264 (12%) Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169 ++N A +E+ AGG E+Q WA L MYTR+ E +K A G AG KS Sbjct: 194 ENKNANVAIVEIRPAAGGEEAQLWATDLAEMYTRFFELQKTWRFAQLQLAGPNAGSKSPA 253 Query: 170 LLIKGPNAYGWLKGE-----------------------QGVHRLVRISPYDSNSRRHTSF 206 L + A K + V + + Sbjct: 254 LQRRDDAAPARRKSRAGSSRPTSKEEERNAVSGALGGVTCIAFRVEGPGVYRQLLKESGV 313 Query: 207 SSIWVYPVV--DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 + P + + + E+D I T R+SG GGQ+VN ++AV + H PTG+ + CQ Sbjct: 314 HRVQRVPRTETQNFQGVALDEADLVIRTARSSGCGGQNVNKVETAVDLLHAPTGIRIFCQ 373 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQ 321 QER+Q NK A +L KL + E + + E + ++ G ++R+Y + Sbjct: 374 QERTQAANKKAAKEILLKKLAARHEE--EVVQQMREERREQVCSGLRSERVRTYNFRD-G 430 Query: 322 MVKDLR-TNIE-KTSPSDVLDGDL 343 V + R T E + +L+G L Sbjct: 431 RVNEHRLTGGEGLFALKPILEGQL 454 >gi|226329846|ref|ZP_03805364.1| hypothetical protein PROPEN_03758 [Proteus penneri ATCC 35198] gi|225200641|gb|EEG82995.1| hypothetical protein PROPEN_03758 [Proteus penneri ATCC 35198] Length = 90 Score = 82.5 bits (202), Expect = 8e-14, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 6/75 (8%) Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKT 333 ++L A++ E+QKR+E + +G G + IR+Y P V D R N+ Sbjct: 1 MSVLGARIRAAEMQKRQE--AEASERRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTFY 57 Query: 334 SPSDVLDGDLDDFMK 348 +V++G LD ++ Sbjct: 58 RLDEVMEGKLDPLIQ 72 >gi|68076525|ref|XP_680182.1| peptide chain release factor 1 [Plasmodium berghei strain ANKA] gi|56501082|emb|CAH94168.1| peptide chain release factor 1, putative [Plasmodium berghei] Length = 252 Score = 81.4 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 58/223 (26%), Positives = 107/223 (47%), Gaps = 9/223 (4%) Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 + N +E G GG E++ W+ L ++Y +A K+K K ++++ + Sbjct: 10 NKNKNHIRIEFRPGIGGDEAELWSKELKKIYQSYANKKKLKVKSVKDITNSLIIKSPNDV 69 Query: 171 LIKGP------NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224 I + Y K E G H++ RI ++ + +S ++I ++ + + + EI+ Sbjct: 70 KINKDGKEIQISLYDLFKNESGTHQVKRIPKNENKEKIQSSTATIAIF-IQNYINKYEIN 128 Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 D +I T+R+S GGQ+VN +SAVRI H TG+ + +ER+Q NK A L K+ Sbjct: 129 LKDLKIMTFRSSKPGGQNVNKIESAVRIVHTHTGIQAESHEERTQELNKKIAMKRLTQKI 188 Query: 285 YELELQKREEIANIGESS-KTEIGWGRQIRSYVLQPYQMVKDL 326 ++L+ +++EE + +IR+Y + D Sbjct: 189 HDLQNREKEEFLQNERIKFTKDCNRSNRIRTYNFFT-GYITDH 230 >gi|156086270|ref|XP_001610544.1| peptide chain release factor 1 [Babesia bovis T2Bo] gi|154797797|gb|EDO06976.1| peptide chain release factor 1, putative [Babesia bovis] Length = 276 Score = 81.4 bits (199), Expect = 2e-13, Method: Composition-based stats. Identities = 62/257 (24%), Positives = 112/257 (43%), Gaps = 25/257 (9%) Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 + A + +E+ G GGTE+ WA L + + ++ + +K + I I Sbjct: 10 PEVPRSATNAQVVVEIRPGVGGTEANTWAQELAKAFKKFCQNKKCNVKEENIGSIIILHI 69 Query: 166 KSATLLIKGPNAYG---WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 + + G E G+H++ R+ + R H+S +++ V P + E Sbjct: 70 QGDDDKFRENGCTGLEERFLREAGIHQVKRVPTSEKAGRMHSSTATVAVLPTELTKAKYE 129 Query: 223 -------ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 I D T R+SGAGGQ+VN ++A +TH PTG+ ++ Q+ER+Q KNK Sbjct: 130 DILAKIVIDPRDIEWKTCRSSGAGGQNVNKVETAAALTHKPTGIRIESQEERTQSKNKEI 189 Query: 276 AWNMLRAKLY-ELELQKREEIANIGESSKTEIG------------WGRQIRSYVLQPYQM 322 A L+ +L ++E R + N + I ++++Y +Q+ Sbjct: 190 ALEKLKIQLAKDIESDVRHDAQNRRKEQVKAIEMNYICTQIKGSKRSERLKTYFFNTHQI 249 Query: 323 VKDLRTNIEKTSPSDVL 339 + D R + + +D L Sbjct: 250 IND-RCGCK-YNLNDFL 264 >gi|222100136|ref|YP_002534704.1| Peptide chain release factor 2 [Thermotoga neapolitana DSM 4359] gi|221572526|gb|ACM23338.1| Peptide chain release factor 2 [Thermotoga neapolitana DSM 4359] Length = 160 Score = 81.0 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 42/137 (30%), Positives = 76/137 (55%), Gaps = 2/137 (1%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++ + + + + + L L K DP +W + +A+ ++ + L N +K Sbjct: 14 ELEKKFKDVLSIVNEEEVNRELKELEKKLSDPSVWDDQKKAREYTQKLKRLKNISEDLKR 73 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ D + +EL E+D ++ + + +Q ++ V+ + E +L+G+ D N+AYL V Sbjct: 74 VRSLFEDLEVAIEL--SEEDMDMVNQVEEIVQDLEKAVKKLELEIILNGKYDPNNAYLSV 131 Query: 122 HAGAGGTESQDWANMLL 138 H GAGGTESQDWA MLL Sbjct: 132 HPGAGGTESQDWAQMLL 148 >gi|99034620|ref|ZP_01314576.1| hypothetical protein Wendoof_01000612 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 89 Score = 80.6 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 7/81 (8%) Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEK 332 A +LRA+LYE+E QK+E + K++IG G +IR+Y P + D R N+ Sbjct: 1 ALKVLRARLYEIERQKKEMERSTM--RKSQIGSGDRSERIRTYNF-PQSRITDHRINLTS 57 Query: 333 TSPSDVL-DGDLDDFMKATLA 352 ++ +G+LD+F++A ++ Sbjct: 58 HRLEQIIKEGELDEFIEALIS 78 >gi|207111206|ref|ZP_03245368.1| peptide chain release factor 2 [Helicobacter pylori HPKX_438_CA4C1] Length = 55 Score = 80.6 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 29/52 (55%), Positives = 36/52 (69%) Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 K EIGWG QIRSYVL PYQ VKD R+NI ++ +LDGD+D ++ L K Sbjct: 3 KDEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 54 >gi|213963016|ref|ZP_03391275.1| putative peptide chain release factor H [Capnocytophaga sputigena Capno] gi|213954357|gb|EEB65680.1| putative peptide chain release factor H [Capnocytophaga sputigena Capno] Length = 230 Score = 80.2 bits (196), Expect = 4e-13, Method: Composition-based stats. Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 4/202 (1%) Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLI 172 + +++ AG G E Q +L+ + + A + L +G+ +KS TL + Sbjct: 1 MQEKIIQITAGRGPLECQWVVAKVLKTFLQEAAQAGIDYTILSREEGDANLTVKSVTLQL 60 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG +LK G V S + +R + ++ +D SE D + T Sbjct: 61 KGKELAPFLKTWLGTVCWVGKSTFRKFHQRSNWYIGVF---ELDQLQRQTFSERDVQFQT 117 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ G GGQ+VN +SAVR TH+PTG+ V Q RSQ NK A L+ KL E+ELQ+ Sbjct: 118 TRSQGNGGQNVNKVNSAVRATHLPTGISVLAQDSRSQLDNKKLALARLKEKLAEMELQQL 177 Query: 293 EEIANIGESSKTEIGWGRQIRS 314 E A ++ T++ G +R+ Sbjct: 178 AEQAQSHWNNHTQVQRGNPVRT 199 >gi|228472445|ref|ZP_04057207.1| putative peptide chain release factor H [Capnocytophaga gingivalis ATCC 33624] gi|228276130|gb|EEK14877.1| putative peptide chain release factor H [Capnocytophaga gingivalis ATCC 33624] Length = 231 Score = 79.8 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 4/202 (1%) Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLI 172 + +++ AG G E Q +L+ + + A + L +G+ +KS TL + Sbjct: 1 MEEKIIQITAGRGPLECQWVVAKVLKTFLQEATQAGISYTILSREEGDANLTVKSVTLQL 60 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG +LK G V S + +R + ++ +D SE D + T Sbjct: 61 KGKELASFLKTWLGTVCWVGKSTFRKFHQRSNWYIGVF---ELDQLQRQLFSERDVQFQT 117 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ G GGQ+VN +SAVR TH+PTG+ V Q RSQ NK A L+ KL E+ELQ+ Sbjct: 118 TRSQGNGGQNVNKVNSAVRATHLPTGISVLAQDSRSQLDNKKLALARLKEKLAEMELQQL 177 Query: 293 EEIANIGESSKTEIGWGRQIRS 314 E A ++ T++ G +R+ Sbjct: 178 AEQAQNHWNNHTQVQRGNPVRT 199 >gi|329848554|ref|ZP_08263582.1| putative peptide chain release factor H [Asticcacaulis biprosthecum C19] gi|328843617|gb|EGF93186.1| putative peptide chain release factor H [Asticcacaulis biprosthecum C19] Length = 208 Score = 79.8 bits (195), Expect = 5e-13, Method: Composition-based stats. Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 5/202 (2%) Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 + L + +G G E L + +TR ++ + L+ + A S L + Sbjct: 1 MTEIILHISSGKGPDECCWVVTKLAQAFTREGAEQGVTCDVLDAGEALPA---SLLLSVS 57 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G A +++ G + V SP+ +R F + + P ++ ESD T Sbjct: 58 GEAAPAFVRERIGTIQWVGDSPFRPLHKRRNWFVGVALAP--SPQSVPDLRESDITFSTM 115 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 RASG GGQHVN TDSAVR H PTG+V Q++RSQH N+ A L L E ++ Sbjct: 116 RASGPGGQHVNKTDSAVRAVHRPTGLVATAQEQRSQHANRKLATLKLALMLEERRVEAGG 175 Query: 294 EIANIGESSKTEIGWGRQIRSY 315 + S+ + G +R+Y Sbjct: 176 QARRDQWSAHQALERGNPVRTY 197 >gi|56203457|emb|CAI18896.1| mitochondrial translational release factor 1-like [Homo sapiens] Length = 164 Score = 79.8 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 68/128 (53%), Positives = 84/128 (65%), Gaps = 1/128 (0%) Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221 + G++ A+ I G AY +K E GVHR+ R+ + R HTS ++ + P I + Sbjct: 38 QGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQ-PTEINL 96 Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 I+ D RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK A LR Sbjct: 97 VINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLR 156 Query: 282 AKLYELEL 289 AKLY + L Sbjct: 157 AKLYSMHL 164 >gi|326334366|ref|ZP_08200579.1| peptide chain release factor H [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325693450|gb|EGD35376.1| peptide chain release factor H [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 233 Score = 79.8 bits (195), Expect = 6e-13, Method: Composition-based stats. Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 4/202 (1%) Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLI 172 + +++ AG G E Q +L+++ + A + L +G+ +KS T+ + Sbjct: 1 MQEKIIQITAGRGPLECQWVVAKVLKVFLQEATQAGISYTILSREEGDANLTVKSVTVQL 60 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 KG +LK G V S + +R + ++ +D SE D + T Sbjct: 61 KGKELAAFLKTWLGTVCWVGKSTFRKFHQRSNWYIGVF---ELDQLQRQPFSECDVQFQT 117 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+ G GGQ+VN +SAVR TH+PTG+ V Q RSQ NK A L+ KL E+ELQ+ Sbjct: 118 TRSQGNGGQNVNKVNSAVRATHLPTGISVLAQDSRSQLDNKKFALARLKEKLIEIELQQL 177 Query: 293 EEIANIGESSKTEIGWGRQIRS 314 E A ++ T++ G +R+ Sbjct: 178 SEQAQSHWNNHTQVQRGNPVRT 199 >gi|194697006|gb|ACF82587.1| unknown [Zea mays] Length = 95 Score = 79.5 bits (194), Expect = 7e-13, Method: Composition-based stats. Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 7/88 (7%) Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLR 327 NKA+A +LRA+LYELE ++ + S +IG G +IR+Y P V D R Sbjct: 1 MNKAKALKVLRARLYELERRRLHMDRSKLRSE--QIGSGDRSERIRTYNF-PQGRVTDHR 57 Query: 328 TNIEKTSPSDVLDGD-LDDFMKATLAIK 354 + S +DV++G+ LD F+ A L + Sbjct: 58 VGVTHHSIADVMEGESLDMFVDALLLQE 85 >gi|218682457|ref|ZP_03530058.1| peptide chain release factor-like protein [Rhizobium etli CIAT 894] Length = 186 Score = 79.5 bits (194), Expect = 8e-13, Method: Composition-based stats. Identities = 61/183 (33%), Positives = 90/183 (49%) Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 + LL + R A E + G KSA + + G A G G R S Sbjct: 4 SALLDIIEREAVGLGCSFEKSLGPMPDRHGAKSAVVSLDGLEAEGIASSYCGTIRFTFKS 63 Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 P +R + ++ + ++ I +D R +T RA G GGQH NTTDSAVRI H Sbjct: 64 PARPGHKRQNWYVAVQRIDAGTEGGKVTIDPADLRFETLRAGGPGGQHQNTTDSAVRILH 123 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 PTG++V+ + ERSQH+NKA A L A L +E++K+E + + I G +++S Sbjct: 124 RPTGLMVRARDERSQHRNKALALRRLEAMLRHIEVEKQEAAKSGRFVANRTIERGNEVKS 183 Query: 315 YVL 317 + L Sbjct: 184 FKL 186 >gi|315497766|ref|YP_004086570.1| peptide chain release factor h [Asticcacaulis excentricus CB 48] gi|315415778|gb|ADU12419.1| peptide chain release factor H [Asticcacaulis excentricus CB 48] Length = 208 Score = 79.1 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 59/202 (29%), Positives = 90/202 (44%), Gaps = 5/202 (2%) Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 + L + +G G E L R +TR A K E + + A S + + Sbjct: 1 MTEIILHLTSGKGPDECCWVVAQLSRAFTREALKDGVACEVINSGEELPA---SLLMSVT 57 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G A ++ G + + SP+ +R F + + P ++ + D T Sbjct: 58 GDQAQAFVSARVGTIQWIGDSPFRPRHKRRNWFVGVNIAP--SPDAMPDLRDEDIVFQTM 115 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 RASG GGQHVN TDSAVR TH TG+VV Q++RSQH N+ A L L E + + Sbjct: 116 RASGPGGQHVNKTDSAVRATHRSTGLVVTAQEQRSQHANRKLARQKLAVLLDEQRQKASD 175 Query: 294 EIANIGESSKTEIGWGRQIRSY 315 + S+ + G+ +R+Y Sbjct: 176 SARQVQWSAHQNLERGKSVRTY 197 >gi|116335021|ref|YP_802516.1| peptide chain release factor B [Candidatus Carsonella ruddii PV] gi|116235302|dbj|BAF35150.1| peptide chain release factor B [Candidatus Carsonella ruddii PV] Length = 270 Score = 79.1 bits (193), Expect = 9e-13, Method: Composition-based stats. Identities = 62/181 (34%), Positives = 103/181 (56%), Gaps = 2/181 (1%) Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163 + L+ + ++ + ++E+ + GG ++ D L Y +W K KF E + + Sbjct: 36 LINNLNIKFNNLNCFVEIISNQGGIDTHDLNKFFLNFYYKWLLKNKFNVEIINLEQSPY- 94 Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 G K + LLI ++ K E G+HR++R +P S+ + TS+ ++ + P + +++ I Sbjct: 95 GYKKSLLLINNFFSFFLFKNESGLHRIIRKNPLISSKKIQTSYLNLNIVPKIINNVNF-I 153 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +++D I+ YR+ G+GGQHVNTT+SA+RI H PT +VV Q ERSQ NK A L K Sbjct: 154 NKNDLIIENYRSKGSGGQHVNTTNSAIRIVHKPTNIVVTSQSERSQMLNKKFAMQTLEYK 213 Query: 284 L 284 L Sbjct: 214 L 214 >gi|169838354|ref|ZP_02871542.1| protease Do [candidate division TM7 single-cell isolate TM7a] Length = 351 Score = 79.1 bits (193), Expect = 1e-12, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 35/74 (47%), Gaps = 4/74 (5%) Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 L+ + +E A + ++ IG G +IR+Y P + D R + ++ +DG Sbjct: 270 RLLQSKIEKEQAKLTAERRSLIGSGDRSEKIRTYNF-PQDRITDHRISYSRSGIPQAMDG 328 Query: 342 DLDDFMKATLAIKK 355 +++D + + ++ Sbjct: 329 NINDLTEHLQSYER 342 >gi|325066842|ref|ZP_08125515.1| peptide chain release factor RF1 [Actinomyces oris K20] Length = 68 Score = 78.7 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 + +IR+Y P + D RT + + VLDGDL + + +A+ Sbjct: 7 VDRSERIRTYNF-PENRIADHRTGFKAYNLDAVLDGDLGPVIASAIAMD 54 >gi|226320937|ref|ZP_03796485.1| Peptide chain release factor 1 [Borrelia burgdorferi 29805] gi|226233639|gb|EEH32372.1| Peptide chain release factor 1 [Borrelia burgdorferi 29805] Length = 88 Score = 78.7 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 6/82 (7%) Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333 +LRA+LYE E K++E + K ++G G +IR+Y P + D R NI Sbjct: 1 MKILRARLYEFEDSKKQE--QRSSNRKQQVGSGDRSERIRTYNF-PQNRITDHRANITLY 57 Query: 334 SPSDVLDGDLDDFMKATLAIKK 355 + + G+LD + + + Sbjct: 58 KLEEFMQGELDPLLDPLMIALQ 79 >gi|226294427|gb|EEH49847.1| peptide chain release factor 1 [Paracoccidioides brasiliensis Pb18] Length = 153 Score = 78.3 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 36/104 (34%), Positives = 61/104 (58%), Gaps = 5/104 (4%) Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE----EIAN 297 HVN T+SA+R+THIPTG+VV Q RSQH+N+ +AW +LRA++ + + RE ++ Sbjct: 9 HVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWQLLRARIAQRRREAREEEMVKLRR 68 Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 ++G G +IR+Y D R+ + + ++++G Sbjct: 69 GAMGGVGKMGRGDKIRTYNFG-QNRCTDHRSGLTLHNLVNIMEG 111 >gi|238022850|ref|ZP_04603276.1| hypothetical protein GCWU000324_02770 [Kingella oralis ATCC 51147] gi|237865658|gb|EEP66796.1| hypothetical protein GCWU000324_02770 [Kingella oralis ATCC 51147] Length = 206 Score = 78.3 bits (191), Expect = 2e-12, Method: Composition-based stats. Identities = 63/197 (31%), Positives = 87/197 (44%), Gaps = 5/197 (2%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 YL++ G E Q +A +LR R AE E L + GI SA + G Sbjct: 2 IYLQLSTGQSPAECQIFAQFVLRKILREAEAAGVAAELLSQTASKH-GILSAVFALSGAG 60 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 A + G + + SP R + ++ P I + R +T RA Sbjct: 61 AEDLAQRWLGTLQWIGNSPVRPKHPRKNWYIGVFRLP----QIPALPDDDSIRFETCRAG 116 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQHVN TDSAVR TH+ TGV V+ + ERSQH NK +A +L KL E + + Sbjct: 117 GKGGQHVNKTDSAVRATHLATGVSVRVESERSQHANKKRARELLALKLAEQHSAALGQHS 176 Query: 297 NIGESSKTEIGWGRQIR 313 S ++ G +R Sbjct: 177 AHAHSQLYQVERGNPVR 193 >gi|300770278|ref|ZP_07080157.1| peptide chain release factor RF4 [Sphingobacterium spiritivorum ATCC 33861] gi|300762754|gb|EFK59571.1| peptide chain release factor RF4 [Sphingobacterium spiritivorum ATCC 33861] Length = 232 Score = 77.9 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 61/203 (30%), Positives = 92/203 (45%), Gaps = 4/203 (1%) Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIK 173 D + V AG G E +++ + A + + L+ +G G SA+L I Sbjct: 1 MDKIIGVTAGRGPEECSWVVAQVIKKIIQEAPTFDVEVQVLDRQEGSINGTVISASLKIS 60 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G N + G + + S + + +R F ++ + S D R Sbjct: 61 GENCMAFSALWTGTIQWIGKSDFRKSHKRKNWFIEVF---EIKPSASWIFDVKDIRYQAM 117 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 R+SGAGGQHVN SAVR TH+PTGV V RSQH+NK A L+ K+ EL L + Sbjct: 118 RSSGAGGQHVNKVSSAVRATHMPTGVSVVAMDSRSQHQNKKIATERLQTKVNELNLLHWK 177 Query: 294 EIANIGESSKTEIGWGRQIRSYV 316 E ++ ++ G IR++V Sbjct: 178 ENEKYKWFNQIQVERGNAIRTFV 200 >gi|70936414|ref|XP_739155.1| peptide release factor [Plasmodium chabaudi chabaudi] gi|56515938|emb|CAH84701.1| peptide release factor, putative [Plasmodium chabaudi chabaudi] Length = 210 Score = 77.9 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 4/179 (2%) Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD--SIEIEI 223 K+ IKG Y E G+HR+ RI + TS ++ + +++I Sbjct: 2 KNIIAHIKGEGVYVDFIQEIGIHRVQRIPINSKKMQTSTSIVLLFDEKQTKEKLEKKMKI 61 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 ++D I+T R+ GAGGQ VN ++ V+ITH PT + V+ Q+ SQ +NK+ A +M++ K Sbjct: 62 PKNDFIIETKRSGGAGGQSVNKNETCVKITHKPTNIFVEVQKTSSQIQNKSIAMDMIKNK 121 Query: 284 LYE-LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 LY Q++ ++ K +IR+Y + V D N++ T G Sbjct: 122 LYNFYYEQEKMNFLKDKKNQKQNGDRSEKIRTYNFS-HNTVIDHIANVQYTGIDQFFKG 179 >gi|325267596|ref|ZP_08134248.1| peptide chain release factor RF2 [Kingella denitrificans ATCC 33394] gi|324980946|gb|EGC16606.1| peptide chain release factor RF2 [Kingella denitrificans ATCC 33394] Length = 202 Score = 77.5 bits (189), Expect = 3e-12, Method: Composition-based stats. Identities = 60/197 (30%), Positives = 88/197 (44%), Gaps = 5/197 (2%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 YL++ G E Q +A LR R AE E L + G++SA + + G Sbjct: 2 IYLQLSTGQAPAECQYFARFALRQMLREAEAAGLDVEILSETPSKH-GLRSAVVAVSGSL 60 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 + + G + V SP+ N R F ++ P E + R +T RA Sbjct: 61 QDNFAQRWLGTLQWVCASPFRPNHARKNWFVAVSRLPDFPAL----PEEGEVRFETCRAG 116 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQHVN T+SAVR H TG+ V+ + ERSQH NK +A +L KL ++ A Sbjct: 117 GKGGQHVNKTESAVRAVHTATGISVRVESERSQHANKKRALELLAVKLAAQHAEQMGRHA 176 Query: 297 NIGESSKTEIGWGRQIR 313 + ++ G +R Sbjct: 177 ADAHAQLYQLERGNAVR 193 >gi|167933019|ref|ZP_02520106.1| Protein chain release factor B [candidate division TM7 single-cell isolate TM7b] Length = 106 Score = 77.2 bits (188), Expect = 4e-12, Method: Composition-based stats. Identities = 46/92 (50%), Positives = 63/92 (68%), Gaps = 1/92 (1%) Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQ VNTTDSAVRITH+PTG+ V Q ERSQ +NK A +LR+KL +++ ++ E N Sbjct: 1 GQGVNTTDSAVRITHLPTGITVAIQNERSQIQNKETALKILRSKLAQIQTEQHAETINDL 60 Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331 + ++ WG QIR+Y+L PY ++KD RT E Sbjct: 61 RAGES-ANWGSQIRNYILHPYTLIKDTRTKYE 91 >gi|225631245|ref|ZP_03787932.1| peptide chain release factor 1 [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591056|gb|EEH12251.1| peptide chain release factor 1 [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 178 Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats. Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 7/176 (3%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + + ++ + + E+P E L +E L I I E + L E Sbjct: 4 NLQDLKKKFNDIERNLENPTNLS-QKEFITLSKEYSELRPIIKIIDEYNTLKEEISDLEE 62 Query: 75 LALEEDDCSILQETSDNLQRIK------LEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128 + +E+ ++E + K + L E DS +A LE+ AG GG Sbjct: 63 IMKDENSEGDIKELAKEEFFEKHKVLLPKIKAKLKLALLPKDEDDSRNAILEIRAGTGGE 122 Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 E+ +A ML RMY ++AE+R +K E + I + G K A+ LI G + LK E Sbjct: 123 EAALFAAMLFRMYQKYAERRNWKFEPISISNTGIGGYKEASALINGTEVFARLKFE 178 >gi|145629735|ref|ZP_01785531.1| peptide chain release factor 1 [Haemophilus influenzae 22.1-21] gi|144978072|gb|EDJ87851.1| peptide chain release factor 1 [Haemophilus influenzae 22.1-21] Length = 102 Score = 76.4 bits (186), Expect = 7e-12, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 45/91 (49%), Gaps = 6/91 (6%) Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVK 324 KNKA+A ++L +++ + E +++ + + +G G + IR+Y P V Sbjct: 4 HSTKNKAKAMSVLASRIVQAEQERQAAEQ--TDMRRNLLGSGDRSDKIRTYNY-PQGRVT 60 Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 D R N+ +V++G +D+ ++ + + Sbjct: 61 DHRINLTIYRLDEVINGKIDELIQPIITEYQ 91 >gi|326201214|ref|ZP_08191086.1| peptide chain release factor H [Clostridium papyrosolvens DSM 2782] gi|325988782|gb|EGD49606.1| peptide chain release factor H [Clostridium papyrosolvens DSM 2782] Length = 205 Score = 76.0 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 4/198 (2%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +++ +G G E + ++ L+ + K + K ++ GE +G + LL + + Sbjct: 3 IQISSGKGPVECELAVSLFLKAFENECNKNQIKINIIDAVPGEISGNYKSVLLSLDCSEH 62 Query: 179 GWLKGE-QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 + G + SPY N +R F ++ V+ ++ E D R ++ R+SG Sbjct: 63 QVIDNIKSGTVLWICKSPYRPNHKRKNWFINVDVF---QIPDKLSFCEKDVRFESMRSSG 119 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQ+VN ++AVR H+PTG+ ++ERSQ+ NK A L + E+ K Sbjct: 120 PGGQNVNKVETAVRAIHLPTGLTATAREERSQYMNKKLALCRLSNLIREMNDSKFSVQKR 179 Query: 298 IGESSKTEIGWGRQIRSY 315 + G IR Y Sbjct: 180 NLWEQHNALERGNPIRIY 197 >gi|296775661|gb|ADH42938.1| protein chain release factor A [uncultured SAR11 cluster alpha proteobacterium H17925_23J24] Length = 214 Score = 76.0 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 42/191 (21%), Positives = 76/191 (39%), Gaps = 7/191 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++R L + + +E L N + KE D + L + Sbjct: 7 VKKVIERYISLEKELSTGKV--EPKLLAKKSKEYSDLKNILPSAKEYVDFEKNKKDLNNI 64 Query: 76 ALEEDDCSIL-----QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 ++ + + +E D ++ + + + L + D + +E+ AG GG E+ Sbjct: 65 IEDKKNDKEMISLAEKELKDAIENKEKNEKKLKIFLLPKDKDDEKNTIVEIRAGTGGLEA 124 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 + L RMY + K+ +K E + I E G K + G N Y +LK E GVHR+ Sbjct: 125 TLFVADLFRMYEKVCSKKGWKIEIISISKSEAKGFKEVIFSVIGENIYSYLKYESGVHRV 184 Query: 191 VRISPYDSNSR 201 R+ ++ R Sbjct: 185 QRVPTTEAQGR 195 >gi|319637886|ref|ZP_07992652.1| peptide chain release factor H [Neisseria mucosa C102] gi|317401041|gb|EFV81696.1| peptide chain release factor H [Neisseria mucosa C102] Length = 206 Score = 76.0 bits (185), Expect = 9e-12, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 2/200 (1%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 YL++ G E + +A +L A+ + E + ++ GI SATL ++G Sbjct: 2 IYLQISTAQGPAECRIFARFVLGKLLAEAQAKGIDAELVTETA-DKHGILSATLKLEGQK 60 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 A + QG + + SP R + ++ P + + E+ SE+ T R+ Sbjct: 61 AESLAQTWQGTLQWICPSPVRPKHPRKNWYIGVFRLPDMPQTYEM-PSENGIEFQTCRSG 119 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQHVN T+SAVR TH +G+ V+ + ERSQH NK A +L KL E + A Sbjct: 120 GKGGQHVNKTESAVRATHKESGISVRVESERSQHANKKLAVMLLAQKLAEHHAGQAGSFA 179 Query: 297 NIGESSKTEIGWGRQIRSYV 316 + ++ G R++V Sbjct: 180 QEQHAQLYQVERGNPKRTFV 199 >gi|289678407|ref|ZP_06499297.1| peptide chain release factor 1 [Pseudomonas syringae pv. syringae FF5] Length = 145 Score = 75.6 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 3/136 (2%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + RE ++ ++ ++ D L Sbjct: 9 LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVTLYAQLLRVQGDLEGAQAL 68 Query: 76 ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 + D + + + Q L D + +LE+ AG GG E+ Sbjct: 69 LKDSDPDMREMAVEEVRETRQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128 Query: 133 WANMLLRMYTRWAEKR 148 ++ L RMY+R+AE+R Sbjct: 129 FSGDLFRMYSRYAERR 144 >gi|261379932|ref|ZP_05984505.1| putative peptide chain release factor H [Neisseria subflava NJ9703] gi|284797642|gb|EFC52989.1| putative peptide chain release factor H [Neisseria subflava NJ9703] Length = 212 Score = 75.6 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 2/200 (1%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 YL++ G E + +A +L A+ + E + ++ GI SATL ++G Sbjct: 8 IYLQISTAQGPAECRIFARFVLGKLLAQAQAKGIDAELVTETA-DKHGILSATLKLEGQK 66 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 A + QG + + SP R + ++ P + E+ SE+ T R+ Sbjct: 67 AESLAQTWQGTLQWICPSPVRPKHPRKNWYIGVFRLPDMPQMYEM-PSENGIEFQTCRSG 125 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQHVN T+SAVR TH +G+ V+ + ERSQH NK A +L KL E + A Sbjct: 126 GKGGQHVNKTESAVRATHKESGISVRVESERSQHANKKLAVMLLAQKLAEHHAGQAGSFA 185 Query: 297 NIGESSKTEIGWGRQIRSYV 316 + ++ G R++V Sbjct: 186 QEQHAQLYQVERGNPKRTFV 205 >gi|108763642|ref|YP_629741.1| ClpA/B family protein [Myxococcus xanthus DK 1622] gi|108467522|gb|ABF92707.1| ClpA/B family protein [Myxococcus xanthus DK 1622] Length = 966 Score = 75.6 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 58/334 (17%), Positives = 120/334 (35%), Gaps = 40/334 (11%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 QR + L +T+ P+LW + A ++R + ++ ++ ++ ++ L+ A Sbjct: 661 QLEQRRAELLAETQAPNLWDDPTRAAEVIRAFRTVEAQLNELERLEAAGLFARRLVREAK 720 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 E +++ R + +A +++ A W L Sbjct: 721 NEVQLGSAARQVEDVAREVQMA---EALHASGATTQDTEALVDICASDSVEAQATWVQEL 777 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 MY WA++R ++ A+ + + I GP AYG+L GE G+HR + Sbjct: 778 ATMYLGWAQRRGYEAVAVAEAEEP----SRVVVRIAGPGAYGFLAGEAGMHRRLE----- 828 Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 + +R ++ + + + + + G ++ + V + + Sbjct: 829 -DEKRQRAYVRVHRGGSLSEEELAYLEVQGRPMK-----SHEGAYLQRVRTEVTVKDESS 882 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317 G V+ + K A ++ + +N E+ + +G G Sbjct: 883 GRVLTLTGATELDELKDIAARVVYG-----------QGSNTDEARRYYLGRG-------- 923 Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 V+D RT DVL G+LD F+ A + Sbjct: 924 ---ARVEDPRTGAGTPRVKDVLRGELDVFIAAWI 954 >gi|326525162|dbj|BAK07851.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 149 Score = 75.6 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 2/139 (1%) Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 + + ++D I + G N VR+ HIP+GV + ERS NK + Sbjct: 11 TRPVNFHLDDNDLEISPLPSKCENGDRRNGA--TVRVQHIPSGVTAESSGERSYFANKLK 68 Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 A + L+AKL + + R + E E G R+ R Y L P ++V DL T I+ + Sbjct: 69 AVSRLKAKLLIITRELRVPDPKMMEKQAVEEGCNRETRRYTLGPQELVHDLNTGIQLSDL 128 Query: 336 SDVLDGDLDDFMKATLAIK 354 + VL+GD++ F++ + + Sbjct: 129 NSVLEGDIEPFIRGRIVSR 147 >gi|261822834|ref|YP_003260940.1| peptide chain release factor-like protein [Pectobacterium wasabiae WPP163] gi|261606847|gb|ACX89333.1| peptide chain release factor H [Pectobacterium wasabiae WPP163] Length = 207 Score = 75.6 bits (184), Expect = 1e-11, Method: Composition-based stats. Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 6/197 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175 L++ A G E L+ R A ++ ++E +E G+ AG +SA +L+ G Sbjct: 2 ILLQLSAAQGPDECMLATAKALQALIRDAARQGIESEIIETEAGKRAGTLRSALVLLNGE 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A G + SP+ R F I + E ++++ R +T ++ Sbjct: 62 QAEPLAASWCGTLQWTCNSPWRKGGGRKNWFIGIARF-----HQERAFADNEIRFETTKS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN T+SAVR TH+ +G+ V+ Q ERSQH NK A ++ +L L+ Q+ E+ Sbjct: 117 SGPGGQHVNKTESAVRATHVASGITVKVQSERSQHANKRLACYLIAYRLEALQQQQHAEL 176 Query: 296 ANIGESSKTEIGWGRQI 312 +I G I Sbjct: 177 RAQRRLFHHQIERGNPI 193 >gi|270659693|ref|ZP_06222357.1| peptide chain release factor 1 [Haemophilus influenzae HK1212] gi|270316971|gb|EFA28651.1| peptide chain release factor 1 [Haemophilus influenzae HK1212] Length = 170 Score = 75.2 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 1/148 (0%) Query: 67 CDNLILLELALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 + L + + + Q + + I+ + Q L D + YLE+ AG Sbjct: 2 QNIEEAEILLDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGT 61 Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185 GG E+ +A L RMY+R+AE ++++ E L ++ E+ G K + + G YG LK E Sbjct: 62 GGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKELIVKVTGEGVYGQLKFES 121 Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYP 213 G HR+ R+ +S R HTS ++ V P Sbjct: 122 GGHRVQRVPKTESQGRIHTSACTVAVMP 149 >gi|225076746|ref|ZP_03719945.1| hypothetical protein NEIFLAOT_01797 [Neisseria flavescens NRL30031/H210] gi|224951914|gb|EEG33123.1| hypothetical protein NEIFLAOT_01797 [Neisseria flavescens NRL30031/H210] Length = 212 Score = 75.2 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 58/200 (29%), Positives = 92/200 (46%), Gaps = 2/200 (1%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 YL++ G E + +A +L A+ + E + ++ GI SATL ++G Sbjct: 8 IYLQISTAQGPAECRIFARFVLGKLLAEAQVKGIDAELVTETA-DKHGILSATLKLEGQK 66 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 + QG + + SP R + ++ P + E+ SE+ T R+ Sbjct: 67 TESLAQTWQGTLQWICPSPIRPKHPRKNWYIGVFRLPDMPQRYEM-PSENGIEFQTCRSG 125 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQHVN T+SAVR TH +G+ V+ + ERSQH NK A +L KL E + A Sbjct: 126 GKGGQHVNKTESAVRATHKESGISVRVESERSQHANKKLAVMLLAQKLAEHHAGQAGNFA 185 Query: 297 NIGESSKTEIGWGRQIRSYV 316 + ++ G R++V Sbjct: 186 QEQHAQLYQVERGNPKRTFV 205 >gi|254472541|ref|ZP_05085940.1| putative peptide chain release factor H [Pseudovibrio sp. JE062] gi|211958005|gb|EEA93206.1| putative peptide chain release factor H [Pseudovibrio sp. JE062] Length = 212 Score = 75.2 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 1/198 (0%) Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 L + +G G E + + + A+K + A + SA + + G Sbjct: 6 TVRLLLSSGDGPAECRLALCHSVAAMEKTAKKLGLSFASDPERSDLSANVASAEVTLAGE 65 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A + K G + SP+ N +R F ++ P V + E + D R +T RA Sbjct: 66 GAKTFAKAWCGTIKWTCQSPFRPNHKRQNWFIGVYELP-VSAAEAGEFNAEDLRFETLRA 124 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 G GGQH N T+SAVR+TH+PTG+ V + ERSQH+NK A L+ KL L ++ + Sbjct: 125 GGPGGQHQNKTESAVRVTHVPTGLSVVARDERSQHRNKQIALQRLQEKLSGLSAEEGARL 184 Query: 296 ANIGESSKTEIGWGRQIR 313 ++ G +R Sbjct: 185 RKSERLLHHQLERGNPVR 202 >gi|115372342|ref|ZP_01459651.1| chaperone ClpB [Stigmatella aurantiaca DW4/3-1] gi|310819555|ref|YP_003951913.1| ClpA/B family protein [Stigmatella aurantiaca DW4/3-1] gi|115370555|gb|EAU69481.1| chaperone ClpB [Stigmatella aurantiaca DW4/3-1] gi|309392627|gb|ADO70086.1| ClpA/B family protein [Stigmatella aurantiaca DW4/3-1] Length = 939 Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 61/334 (18%), Positives = 125/334 (37%), Gaps = 40/334 (11%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 +R + L ++T+ P+LW + A +R + ++ I+ ++ ++ + L+ A Sbjct: 636 LEERRNQLLSETQAPNLWDDPARAAATLRAFRTVEAQINELERMEQAVTFARRLVREAKN 695 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 E + + + + R + A+ +A +++ W L Sbjct: 696 EVQLTSAAKQVEEVAREVQMS---EALHASGATANDVEALVDICVSDSVEAQDAWIQELA 752 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 MY WA+KR ++ + + + I GP AYG+L GE G+HR + Sbjct: 753 TMYLGWAQKRGYEAMLVAEAESPA----RVVVRIAGPGAYGFLAGEAGLHRRIE------ 802 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 +R ++ + +D ++E+S + + G + + V + TG Sbjct: 803 EEKRQRAYVRVHRGGALDAPEDLELSVEGRPVKQHE-----GAFLERVRTEVTVKDSATG 857 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 V+ + K A ++ + + E+ + +G G Sbjct: 858 RVLTLMGSGELDELKGIATRVVSG-----------QATSTDEARRYYLGRG--------- 897 Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 V+D RT DVL GD+D F+ A ++ Sbjct: 898 --ARVEDPRTGAGTPRVKDVLRGDMDLFIAAWIS 929 >gi|50122538|ref|YP_051705.1| peptide chain release factor-like protein [Pectobacterium atrosepticum SCRI1043] gi|49613064|emb|CAG76515.1| putative peptide chain release factor [Pectobacterium atrosepticum SCRI1043] Length = 207 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 6/195 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175 L++ A G E L TR A ++ + E +E G+ AG +SA +L+ G Sbjct: 2 ILLQLSAAQGPDECMLATAKALHALTRDAARQGIECEIIETEVGKRAGTLRSALVLLNGE 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A G + SP+ R F + + E ++ + R +T ++ Sbjct: 62 QAEPLAASWCGTLQWTCNSPWRKGGGRKNWFIGVARF-----HQEQAFADDEIRFETTKS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN T+SAVR TH+ +G+ V+ Q ERSQH NK A ++ +L L+ Q+ E+ Sbjct: 117 SGPGGQHVNKTESAVRATHVASGITVKVQSERSQHANKRLACYLIAYRLEALQQQQHAEL 176 Query: 296 ANIGESSKTEIGWGR 310 +I G Sbjct: 177 RAQRRLFHHQIERGN 191 >gi|88607060|ref|YP_505064.1| peptide chain release factor 2, truncation [Anaplasma phagocytophilum HZ] gi|88598123|gb|ABD43593.1| peptide chain release factor 2, truncated [Anaplasma phagocytophilum HZ] Length = 72 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 19/38 (50%), Positives = 25/38 (65%) Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352 Y + PY+MVKDLRT E + V++GDLD F+ A L Sbjct: 23 YKMHPYRMVKDLRTGHETGNVDAVMNGDLDAFITAALM 60 >gi|303240867|ref|ZP_07327379.1| peptide chain release factor H [Acetivibrio cellulolyticus CD2] gi|302591595|gb|EFL61331.1| peptide chain release factor H [Acetivibrio cellulolyticus CD2] Length = 204 Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats. Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 6/197 (3%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +++ +G G E + ++ L+ Y + + T ++ G +G + LL A Sbjct: 3 IQISSGKGPDECELAVSLFLKSYQNECKNKGIITNVIDAIPGNISGNLKSVLLSLECQAQ 62 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 L G + SPY N +R F ++ + + ++ SE D ++ R+SG Sbjct: 63 EEL---NGTVLWICKSPYRPNHKRKNWFINVEAF---QSTEKLNFSEKDVSFESMRSSGP 116 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQ+VN +SAVR H+PTG+ V +ERSQ+ NK A L + + + Sbjct: 117 GGQNVNKVESAVRAIHLPTGLTVTASEERSQYMNKKLALGRLSNLIKAINNEDSASHKKT 176 Query: 299 GESSKTEIGWGRQIRSY 315 ++ G IR Y Sbjct: 177 MWMQHNDLERGNPIRIY 193 >gi|307688011|ref|ZP_07630457.1| peptide chain release factor 2 [Clostridium cellulovorans 743B] Length = 80 Score = 73.7 bits (179), Expect = 4e-11, Method: Composition-based stats. Identities = 52/80 (65%), Positives = 63/80 (78%) Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +D YR SGAGGQHVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA ++AKLYELE+ Sbjct: 1 MDVYRTSGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEM 60 Query: 290 QKREEIANIGESSKTEIGWG 309 QK+ E +K++IGWG Sbjct: 61 QKKNAEKQAMEDNKSDIGWG 80 >gi|300775389|ref|ZP_07085251.1| probable peptide chain release factor H [Chryseobacterium gleum ATCC 35910] gi|300506129|gb|EFK37265.1| probable peptide chain release factor H [Chryseobacterium gleum ATCC 35910] Length = 232 Score = 73.7 bits (179), Expect = 5e-11, Method: Composition-based stats. Identities = 57/201 (28%), Positives = 100/201 (49%), Gaps = 4/201 (1%) Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIK 173 + +++ +G G E Q A +L+ + A++ E + +G+E +KS T+L+K Sbjct: 1 MEKIIQITSGRGPLECQWVAAKVLKTFLEEAKQNTIDYEIIHRENGDENLTLKSVTILLK 60 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G +LK G S + +R F I+ +++ I+ +E D R T Sbjct: 61 GKEINLFLKNWLGTVCWTGKSTFRKLHKRSNWFIGIF---ELENVKMIDFNEKDIRFQTA 117 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 R+ G+GGQ+VN ++AVR THIPT V Q RSQ +NK ++ L+ K+ + +Q+ E Sbjct: 118 RSQGSGGQNVNKVNTAVRATHIPTNETVFVQDSRSQLENKKRSVIRLKEKVMAVYIQQLE 177 Query: 294 EIANIGESSKTEIGWGRQIRS 314 S + ++ G +R+ Sbjct: 178 RKMKDTWSLQMQVERGNPVRT 198 >gi|218670324|ref|ZP_03519995.1| peptide chain release factor-like protein [Rhizobium etli GR56] Length = 175 Score = 73.3 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 54/153 (35%), Positives = 77/153 (50%) Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217 + G KSA + + G +A G G R SP +R + ++ + Sbjct: 16 PMPDRHGAKSAIVNLDGLHADRIAGGYCGKIRFTFESPVRPGHKRQNWYVAVQRIQAGPE 75 Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 ++ I+ +D R T RA G GGQH NTTDSAVR+ H PTG+VV + ERSQH+NKA A Sbjct: 76 GGQVTINPADQRFQTLRAGGPGGQHQNTTDSAVRVLHRPTGLVVTARDERSQHRNKALAL 135 Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGR 310 L A L ++E +K+E + + I G Sbjct: 136 RRLEAMLRQVEAEKQEAAKSGRFIANRTIERGN 168 >gi|300697304|ref|YP_003747965.1| peptide chain release factor homolog protein [Ralstonia solanacearum CFBP2957] gi|299074028|emb|CBJ53565.1| putative peptide chain release factor homolog protein [Ralstonia solanacearum CFBP2957] Length = 210 Score = 73.3 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 6/195 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175 L+ + G E + L R + + + E +E DGE AG +SA + ++G Sbjct: 5 ILLQFSSAQGPAECELAVVKALACLLRESARAGVRAEIVEQEDGECAGTLRSALVSLEGD 64 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 + +G + SPY R F + + S+ R +T RA Sbjct: 65 AEADVAQRWEGTIQWTCPSPYRPRHARKNWFFGVARC-----AAPAVTLPSEIRFETTRA 119 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN T+SAVR H+ TG+ V+ Q ERSQH NK A +L +L E Sbjct: 120 SGPGGQHVNKTESAVRAIHVATGISVKVQTERSQHANKRLAVLLLAHRLANHEEAMNAAQ 179 Query: 296 ANIGESSKTEIGWGR 310 + ++ G Sbjct: 180 RAQRRTLHHQVERGN 194 >gi|302420205|ref|XP_003007933.1| peptide chain release factor 1 [Verticillium albo-atrum VaMs.102] gi|261353584|gb|EEY16012.1| peptide chain release factor 1 [Verticillium albo-atrum VaMs.102] Length = 253 Score = 73.3 bits (178), Expect = 6e-11, Method: Composition-based stats. Identities = 64/191 (33%), Positives = 97/191 (50%), Gaps = 28/191 (14%) Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGI----------KSATLLIKGPNAYGWLKGEQGVHR 189 MY ++ ++ AL+ + AG + A L IK AYG +GE G+HR Sbjct: 1 MYKQYCAYMGYRAVALKYEMADGAGSASTSAGEEPLQEAVLEIKDAGAYGLFRGEAGMHR 60 Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSI------------------EIEISESDCRID 231 + R+ + + R HTS ++WV P DS + + ++ RI+ Sbjct: 61 VQRVPDTEKSGRTHTSAVAVWVLPSFPDSHEAAGGGGGGDMNVDDPASDFYLDPAELRIE 120 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T RA GAGGQHVN T+SA+R+TH+PTG VV Q R Q +N+ AW ++R+++ L + Sbjct: 121 TMRARGAGGQHVNKTESAIRMTHLPTGTVVSMQDSRQQSRNREDAWKLMRSRVALLRREA 180 Query: 292 REEIANIGESS 302 REE A + Sbjct: 181 REEQAARLRDN 191 >gi|239623937|ref|ZP_04666968.1| peptide chain release factor 2 [Clostridiales bacterium 1_7_47_FAA] gi|239521968|gb|EEQ61834.1| peptide chain release factor 2 [Clostridiales bacterium 1_7_47FAA] Length = 196 Score = 72.9 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 12/199 (6%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 +++ +G G E + + R + + A G Sbjct: 1 MRVQISSGQGPAECELAVGLFYRQLQKERRDMRLVQSAH--------GKTGRGYSSIMFE 52 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 ++ +G + SP+ RR F + + + D+ E R +T+ + Sbjct: 53 TEEDMRELEGSVLWICKSPFRPEHRRKNWFIDVSILEQLPDAREDM----KLRFETFCSG 108 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQHVN ++ VRI H+PTG+ V + RSQH NK A N L L ++EL+ R+ Sbjct: 109 GKGGQHVNKVETGVRIIHVPTGISVVSTEARSQHMNKKLAMNRLCDILADMELENRQREK 168 Query: 297 NIGESSKTEIGWGRQIRSY 315 + T + G +R Y Sbjct: 169 ELAWLEHTRLERGNPVRIY 187 >gi|15896625|ref|NP_349974.1| protein chain release factor B [Clostridium acetobutylicum ATCC 824] gi|15026468|gb|AAK81314.1|AE007835_3 Protein chain release factor B [Clostridium acetobutylicum ATCC 824] gi|325510788|gb|ADZ22424.1| Protein chain release factor B [Clostridium acetobutylicum EA 2018] Length = 204 Score = 72.9 bits (177), Expect = 7e-11, Method: Composition-based stats. Identities = 60/200 (30%), Positives = 95/200 (47%), Gaps = 4/200 (2%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL-LIKGPNA 177 L++ AG G ES + + L + + + R K E L+ GE+ G + + G A Sbjct: 3 LQISAGTGPVESCRFVYLFLNLVKKECKYRNIKIEVLDFVPGEKIGTLKSVFLKLSGEGA 62 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 + G H L+ S Y N RR F ++ + + +++ D I+ R+SG Sbjct: 63 KTYASSITGTHLLIWESEYRKNHRRKNWFIAVNSFSYETNED---LNDKDIIIEKMRSSG 119 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQHVN T++AVRITH TG+VV +ERSQ N A L +L +L ++R+ + Sbjct: 120 KGGQHVNKTETAVRITHKKTGIVVNSSEERSQFANIKLAKARLIIELKKLSDERRKRNRS 179 Query: 298 IGESSKTEIGWGRQIRSYVL 317 ++ I G + Y Sbjct: 180 ERWTAGINIVRGNPVNVYTY 199 >gi|256426219|ref|YP_003126872.1| peptide chain release factor-like protein [Chitinophaga pinensis DSM 2588] gi|256041127|gb|ACU64671.1| peptide chain release factor H [Chitinophaga pinensis DSM 2588] Length = 210 Score = 72.5 bits (176), Expect = 8e-11, Method: Composition-based stats. Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 10/203 (4%) Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI- 172 N + ++V AG G E ++ M + A + LE G G + +L+ Sbjct: 1 MNKSIIQVTAGRGPEECSRVVARVVEMMMKDARGKALDITLLESTKGHLKGTLLSAVLLI 60 Query: 173 ------KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 +++ +G + V SP+ +R F + V+ V + Sbjct: 61 QTGGISSNKTLEAFIQEWRGTIQWVAQSPFRKYHKRKNWFVGVEVFDVNKQQE---WNLK 117 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D ++++ RASG GGQHVN ++AVR TH+P+G+ V RSQ +NK L AK Sbjct: 118 DVKLESCRASGPGGQHVNKVETAVRGTHLPSGMQVLAMDSRSQLENKQLCLKRLEAKFMA 177 Query: 287 LELQKREEIANIGESSKTEIGWG 309 ++++ E+ G Sbjct: 178 WQMEQLLAKQQDQWQEHNELERG 200 >gi|315652605|ref|ZP_07905584.1| chain release factor B [Eubacterium saburreum DSM 3986] gi|315485145|gb|EFU75548.1| chain release factor B [Eubacterium saburreum DSM 3986] Length = 199 Score = 72.5 bits (176), Expect = 9e-11, Method: Composition-based stats. Identities = 52/199 (26%), Positives = 83/199 (41%), Gaps = 9/199 (4%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 L++ AG G E Q + + + + + G + T + Sbjct: 1 MILQISAGMGPVECQRAVFGICKALMKEIPSLEILSYVD--------GEEKETFYSVMLS 52 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 + L +G + S Y +R F + + P +++ SE+D ++ + AS Sbjct: 53 SDEDLSYIEGTMLWICKSRYRPEHKRKNWFVDVSIIP-ETVNVDDNFSEADIIVEKFHAS 111 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQ+VN ++ VR+ HIPTG+ + +ERSQ NK A L L + E+ Sbjct: 112 GPGGQNVNKVETGVRVIHIPTGIRISSTRERSQLMNKKDALRKLAIVLKNKNTSQIEQSK 171 Query: 297 NIGESSKTEIGWGRQIRSY 315 N S TEI G IR Y Sbjct: 172 NNAWSKHTEIVRGNPIRVY 190 >gi|266622715|ref|ZP_06115650.1| peptide chain release factor 2 [Clostridium hathewayi DSM 13479] gi|288865552|gb|EFC97850.1| peptide chain release factor 2 [Clostridium hathewayi DSM 13479] Length = 51 Score = 72.5 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 20/37 (54%), Positives = 24/37 (64%) Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 +QPY MVKD RTN E + + VLDG LD F+ A L Sbjct: 1 MQPYTMVKDHRTNAETGNVNSVLDGALDLFIYAYLRW 37 >gi|70729456|ref|YP_259194.1| peptide chain release factor-like protein [Pseudomonas fluorescens Pf-5] gi|68343755|gb|AAY91361.1| peptide chain release factor 2 [Pseudomonas fluorescens Pf-5] Length = 206 Score = 72.1 bits (175), Expect = 1e-10, Method: Composition-based stats. Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 6/199 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGP 175 L++ + G E + LR AE + + +E + +S + + G Sbjct: 3 MLLQLSSAQGPAECELAVTHALRRLHHEAEAQNVRLGIIEQVASQARDAHRSVLVSLDGE 62 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 +A + G + SP RR + + P + R + RA Sbjct: 63 HAANLARRWTGTLLWICKSPLRPAHRRKNWYFAGQ--PFCALEEA---EGGEIRFEAMRA 117 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN TDSAVR TH+ TG+ V+ Q ERSQH NK A +++ +L + + Q +E+ Sbjct: 118 SGPGGQHVNKTDSAVRATHVATGISVKVQSERSQHDNKRLARLLIQQRLADRQEQSVQEL 177 Query: 296 ANIGESSKTEIGWGRQIRS 314 + + G +R+ Sbjct: 178 RLQRRDAHHRVERGNAVRT 196 >gi|227325964|ref|ZP_03829988.1| peptide chain release factor-like protein [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 207 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 57/195 (29%), Positives = 91/195 (46%), Gaps = 6/195 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175 L++ A G E L+ TR A ++ + E +E G+ +G +SA +L+ G Sbjct: 2 ILLQLSAAQGPDECMLATAKALQALTRDAARQGIECEVIETEAGKRSGTLRSALVLLNGE 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A G + SP+ R F I + E ++++ R + ++ Sbjct: 62 QAEPLAASWCGTLQWTCNSPWRKGGGRKNWFIGIARF-----HQEQAFADNEIRFEATKS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN T+SAVR TH+ +G+ V+ Q ERSQH NK A ++ +L L+ Q+ E+ Sbjct: 117 SGPGGQHVNKTESAVRATHVASGITVKVQSERSQHANKRLACYLIAYRLEALQQQQHAEL 176 Query: 296 ANIGESSKTEIGWGR 310 +I G Sbjct: 177 RAQRRLFHHQIERGN 191 >gi|207724424|ref|YP_002254821.1| peptide chain release factor homolog protein [Ralstonia solanacearum MolK2] gi|206589645|emb|CAQ36606.1| peptide chain release factor homolog protein [Ralstonia solanacearum MolK2] Length = 207 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 6/195 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175 L+ + G E + L R + + + E +E DGE AG +SA + ++G Sbjct: 2 ILLQFSSAQGPAECELAVVKALACLLRESARAGVRAEIVEQEDGEHAGTLRSALVSLEGD 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 + +G + SPY R F + + S+ R +T RA Sbjct: 62 AEADIAQRWEGTIQWTCPSPYRPRHARKNWFFGVARC-----AAPAVTLPSEIRFETTRA 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN T+SAVR H+ TG+ V+ Q ERSQH NK A +L +L E Sbjct: 117 SGPGGQHVNKTESAVRAVHVATGISVKVQTERSQHANKRLAVLLLAHRLASHEETMNAAQ 176 Query: 296 ANIGESSKTEIGWGR 310 + ++ G Sbjct: 177 RAQRRTLHHQVERGN 191 >gi|260596640|ref|YP_003209211.1| putative peptide chain release factor [Cronobacter turicensis z3032] gi|260215817|emb|CBA28276.1| Putative peptide chain release factor homolog [Cronobacter turicensis z3032] Length = 240 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 59/206 (28%), Positives = 88/206 (42%), Gaps = 6/206 (2%) Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KS 167 + L++ + G E + L + A + +E G AG +S Sbjct: 29 NQRGAKRMILLQLSSAQGPDECCLAVSKALEALRKEAAQADVALSVIEEEPGPRAGTLRS 88 Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 A + ++G NA + G + + SPY R F V+ + ++ +SD Sbjct: 89 ALVSLEGENAQPLAQRWCGTLQWICESPYRPRHARKNWFIGAAVF-----TPVGDMPQSD 143 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 R D RASG GGQHVN TDSA+R TH+ +G+ V+ Q ERSQH NK A ++ KL E Sbjct: 144 IRFDALRASGPGGQHVNKTDSAIRATHVASGISVKVQSERSQHANKRLATLLIAHKLEEQ 203 Query: 288 ELQKREEIANIGESSKTEIGWGRQIR 313 + +I G R Sbjct: 204 RDAQSAGQKAQRRWFHHQIARGNPTR 229 >gi|227112372|ref|ZP_03826028.1| peptide chain release factor-like protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 207 Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 57/195 (29%), Positives = 88/195 (45%), Gaps = 6/195 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175 L++ A G E L TR A ++ E +E G+ AG +SA +L+ G Sbjct: 2 ILLQLSAAQGPDECMLATTKALHALTRDAARQGVNCEIIETEAGKRAGTLRSALVLLNGE 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A G + SP+ R F + + E ++ + R + ++ Sbjct: 62 QAEPLAANWCGTLQWTCNSPWRKGGGRKNWFIGVARF-----HQEQAFADHEIRFEATKS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN T+SAVR TH+ +G+ V+ Q ERSQH NK A ++ +L L+ Q+ E+ Sbjct: 117 SGPGGQHVNKTESAVRATHVASGITVKVQSERSQHANKRLACYLIAYRLEALQQQQHAEL 176 Query: 296 ANIGESSKTEIGWGR 310 +I G Sbjct: 177 RPQRRLFHHQIERGN 191 >gi|146301198|ref|YP_001195789.1| peptide chain release factor-like protein [Flavobacterium johnsoniae UW101] gi|146155616|gb|ABQ06470.1| Class I peptide chain release factor [Flavobacterium johnsoniae UW101] Length = 229 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 4/197 (2%) Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA-TLLIKGPN 176 +++ AG G E +L+ A+ + L+ GEE G ++ +KG N Sbjct: 4 IIQITAGRGPAECTWVVAQVLKKVLEEAQDQNLDVVLLQREKGEENGTIETASISVKGKN 63 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 A ++K G + + S + +R F I+ ++ +SE+D + R+S Sbjct: 64 ADQFVKSWIGTIQWIGQSQFRKMHKRKNWFIGIF---EIEPQKNASVSENDIQYQAMRSS 120 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 GAGGQHVN SA+R THIPTG+ V RSQH+NK A L KL + +L + + Sbjct: 121 GAGGQHVNKVSSAIRATHIPTGIAVVAMDSRSQHQNKKLATERLLKKLEDEKLVQLKNHV 180 Query: 297 NIGESSKTEIGWGRQIR 313 ++ + G IR Sbjct: 181 GKQWENQLNVERGNPIR 197 >gi|160897900|ref|YP_001563482.1| peptide chain release factor H [Delftia acidovorans SPH-1] gi|160363484|gb|ABX35097.1| peptide chain release factor H [Delftia acidovorans SPH-1] Length = 199 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 57/194 (29%), Positives = 79/194 (40%), Gaps = 7/194 (3%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA- 177 +++ A G E + + LR R + LE AG KS L +G Sbjct: 4 IQLTASHGPAECEHAVRLTLRELLRDCAASGIAVDVLEETPTP-AGYKSVLLRCEGDTGL 62 Query: 178 -YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 +G L G + V SP + R F V + ++ + +AS Sbjct: 63 LHGTLGAWLGTIQWVFDSPLRPHHPRRNWF----VAVQKCEPPRQLPADGEIVFQACKAS 118 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQHVNTTDSAV H+P+G+ V+ ERSQH NK A +L KL L Q + Sbjct: 119 GKGGQHVNTTDSAVHALHVPSGISVKVMSERSQHANKRLARELLALKLARLNAQGEGQAR 178 Query: 297 NIGESSKTEIGWGR 310 E+ G Sbjct: 179 RTRSQQHWEVERGS 192 >gi|261345238|ref|ZP_05972882.1| putative peptide chain release factor H [Providencia rustigianii DSM 4541] gi|282566935|gb|EFB72470.1| putative peptide chain release factor H [Providencia rustigianii DSM 4541] Length = 203 Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats. Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 6/194 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 L+ + G E + + A + + LE ++ G+KS + ++G Sbjct: 2 TLLQFSSAQGPDECCIAVEKAFSCFLKEAALLDVQIDVLESFPSKQ-GLKSVLVSLEGKQ 60 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 + + G + SP +R F S+ + + E S+ + ++ Sbjct: 61 SEQLVNVWSGTVQWQCQSPLRPRHKRKNWFISVIAFSPIQPLEE-----SEIEYEFTKSQ 115 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 GAGGQHVN T SAVR H+ TG+ V+ Q ERSQH NK A ++ KL E + Q+R ++ Sbjct: 116 GAGGQHVNKTCSAVRAKHVSTGISVKVQSERSQHANKRLAKELIHWKLSEFQSQQRTDLD 175 Query: 297 NIGESSKTEIGWGR 310 S +I G Sbjct: 176 KQRHHSHYQIERGN 189 >gi|212710167|ref|ZP_03318295.1| hypothetical protein PROVALCAL_01221 [Providencia alcalifaciens DSM 30120] gi|212687166|gb|EEB46694.1| hypothetical protein PROVALCAL_01221 [Providencia alcalifaciens DSM 30120] Length = 203 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 6/194 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 L+ + G E + + A K TE LE ++ G+KS + + G + Sbjct: 2 ILLQFSSAQGPEECCIAVENAFACFVKEAALLKVNTELLESCPSKQ-GLKSVLIALDGIH 60 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 A + G + SP +R F S+ ++ + + S+ + ++ Sbjct: 61 AEKMAERWSGTIQWQCQSPLRPRHKRKNWFISVMMF-----TPIQPLENSEIEYEFTQSQ 115 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 GAGGQHVN T SAVR H+ TG+ V+ Q ERSQH NK A ++ KL E + Q+ + Sbjct: 116 GAGGQHVNKTCSAVRAKHVATGISVKVQSERSQHANKKLAKELIHWKLCEYQSQQLNTLD 175 Query: 297 NIGESSKTEIGWGR 310 S +I G Sbjct: 176 KQRHLSHYQIERGN 189 >gi|294668973|ref|ZP_06734059.1| putative peptide chain release factor H [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308965|gb|EFE50208.1| putative peptide chain release factor H [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 205 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 61/194 (31%), Positives = 92/194 (47%), Gaps = 5/194 (2%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 YL++ G E + +A +L+ AE R K E ++ GI SA L+++G Sbjct: 2 IYLQISTAQGPAECRIFARFVLKKLLAEAEARNVKAEIAGETA-DKHGILSAVLILEGAA 60 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 A + QG + V SP R + I+ P + SES+ T R+ Sbjct: 61 ADTLAQSWQGTLQWVCASPVRPKHPRKNWYIGIFRLPEKPE----MPSESEIEFQTCRSG 116 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQHVN T+SAVR TH +G+ V+ + ERSQH NK +A +L K+ E + + + A Sbjct: 117 GKGGQHVNKTESAVRATHKASGISVRVESERSQHANKKRALELLAYKMAEHQTAQNADYA 176 Query: 297 NIGESSKTEIGWGR 310 S ++ G Sbjct: 177 KQQHSGLYQVERGN 190 >gi|183600289|ref|ZP_02961782.1| hypothetical protein PROSTU_03848 [Providencia stuartii ATCC 25827] gi|188020079|gb|EDU58119.1| hypothetical protein PROSTU_03848 [Providencia stuartii ATCC 25827] Length = 202 Score = 71.0 bits (172), Expect = 3e-10, Method: Composition-based stats. Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 6/194 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 L+ + G E L + A+KR+ LE + G+KSA + ++G Sbjct: 1 MLLQFSSAQGPEECCIAVEKALACFFIEAKKREVMVNTLETVASKH-GLKSALVALEGHG 59 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 A + G + SP +R F ++ + + E SD + +A Sbjct: 60 AEELAQLWSGTIQWQCQSPLRPKHKRKNWFINVIRFSPIQTIEE-----SDIEFEFIKAQ 114 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQHVN T SAVR H+ TG+ V+ Q ERSQH NK A ++ +L E + Q+ + Sbjct: 115 GPGGQHVNKTCSAVRAKHLATGISVKVQSERSQHANKKLAKQLIYWRLNEYQDQQASALN 174 Query: 297 NIGESSKTEIGWGR 310 ++ +I G Sbjct: 175 KQRHNAHYQIERGN 188 >gi|126737179|ref|ZP_01752914.1| putative peptide chain release factor [Roseobacter sp. SK209-2-6] gi|126721764|gb|EBA18467.1| putative peptide chain release factor [Roseobacter sp. SK209-2-6] Length = 213 Score = 70.6 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 57/199 (28%), Positives = 82/199 (41%), Gaps = 3/199 (1%) Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 + V +G+G E Q +L + E + + G KSA +L+ G Sbjct: 5 RHISVLVTSGSGPAECQQAVANVLNVMR--TEAELLAVDFDTNGARSKHGYKSAVVLVSG 62 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 A + K +G + S +R F ++ P I SD +DT+R Sbjct: 63 AEAEAFAKNWRGTIQWRAQSNLRPKHKRANWFIGVFDLP-ASVRTPERIQASDVILDTFR 121 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 A G GGQH NTTDSAVR TH PTG+ ++ERSQH+NKA A L+ + Sbjct: 122 AGGPGGQHQNTTDSAVRATHRPTGLSAVAREERSQHRNKALALERLQHLMAAQAAADEAA 181 Query: 295 IANIGESSKTEIGWGRQIR 313 + G +R Sbjct: 182 QKASRNELHYALERGNPVR 200 >gi|239982310|ref|ZP_04704834.1| peptide chain release factor 1 [Streptomyces albus J1074] gi|291454154|ref|ZP_06593544.1| peptide chain release factor 1 [Streptomyces albus J1074] gi|291357103|gb|EFE84005.1| peptide chain release factor 1 [Streptomyces albus J1074] Length = 121 Score = 70.6 bits (171), Expect = 4e-10, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 3/123 (2%) Query: 13 LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 +F+ + + + + + DP + + A+ L + L + + + D Sbjct: 1 MFEAVEELIGEHADIEKRLADPAVHADQAGARKLNKRYAELTPIVGTYRSWKQTGEDIET 60 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 EL DD E + + E + + +D D LE+ AGAGG ES Sbjct: 61 AREL--AADDPDFAAEVKELEAAREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESA 118 Query: 132 DWA 134 +A Sbjct: 119 LFA 121 >gi|312891971|ref|ZP_07751474.1| peptide chain release factor H [Mucilaginibacter paludis DSM 18603] gi|311295602|gb|EFQ72768.1| peptide chain release factor H [Mucilaginibacter paludis DSM 18603] Length = 205 Score = 70.2 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 49/202 (24%), Positives = 93/202 (46%), Gaps = 4/202 (1%) Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLI 172 +++ +G G E + R+ + A++ + LE + + +G SAT++ Sbjct: 1 MEKMMIQITSGKGPAECCRVVACVQRLMLKQAKQFGVDIQVLENREADLSGTFLSATMMA 60 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G + + +G R + SPY +R F + D ++ + D +++T Sbjct: 61 QGMQLEVFRREWEGTIRWIAQSPYRRYHQRKNWFVGV---AFFDIKQLMQWNPKDVKLET 117 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+SG GGQHVN ++AVR TH+P+G+ V RSQ +NK L AK+ + ++ Sbjct: 118 TRSSGPGGQHVNKVETAVRGTHLPSGIQVMAMDSRSQLENKKLCLARLEAKIMVWQTEQL 177 Query: 293 EEIANIGESSKTEIGWGRQIRS 314 E + + G +++ Sbjct: 178 MEQQHSQWLQHHALERGNPVKT 199 >gi|289806630|ref|ZP_06537259.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 97 Score = 70.2 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 6/81 (7%) Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLR 327 K KA+A ++L A+++ E KR++ + + +G G + R+Y P V D R Sbjct: 2 KTKAKALSVLGARIHAAETAKRQQ--AEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHR 58 Query: 328 TNIEKTSPSDVLDGDLDDFMK 348 N+ + ++G LD ++ Sbjct: 59 INLTLYRLDETMEGKLDMLIE 79 >gi|209526204|ref|ZP_03274734.1| peptide chain release factor 1 [Arthrospira maxima CS-328] gi|209493301|gb|EDZ93626.1| peptide chain release factor 1 [Arthrospira maxima CS-328] Length = 98 Score = 70.2 bits (170), Expect = 5e-10, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 52/88 (59%), Gaps = 7/88 (7%) Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLR 327 + +A +LRAKLY+++LQ+R+E + ++++G G +IR+Y + + D R Sbjct: 3 ELLERAIQILRAKLYDIKLQERQE--KVTSLRRSQVGTGARSEKIRTYNYKD-NRITDHR 59 Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIKK 355 + + +++LDGD+D M+A ++ + Sbjct: 60 LG-QNFTLANILDGDIDQVMEACISQDQ 86 >gi|255067533|ref|ZP_05319388.1| putative peptide chain release factor H [Neisseria sicca ATCC 29256] gi|255048154|gb|EET43618.1| putative peptide chain release factor H [Neisseria sicca ATCC 29256] Length = 219 Score = 69.8 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 5/208 (2%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + + + YL++ G E + +A +L A+ + E + ++ G+ Sbjct: 3 RIKMKQNLQTIYLQISTAQGPAECRIFARFVLGRLLAEAKAESVEAEIISETA-DKHGMM 61 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226 SA L + G +A + QG + + SP R + ++ P + D SES Sbjct: 62 SAVLKLDGKHAETLAQRWQGSLQWICASPVRPKHPRKNWYIGVFRMPDMPDM----PSES 117 Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 + + R+ G GGQHVN T+SAVR TH +G+ V+ + ERSQH NK A +L KL E Sbjct: 118 EIEFQSCRSGGKGGQHVNKTESAVRATHKASGISVRVESERSQHANKKLALTLLTQKLAE 177 Query: 287 LELQKREEIANIGESSKTEIGWGRQIRS 314 + + A S ++ G R+ Sbjct: 178 HHAGQTDNYARAQHSRLYQVERGNPKRT 205 >gi|325278153|ref|ZP_08143661.1| peptide chain release factor 2 [Pseudomonas sp. TJI-51] gi|324096712|gb|EGB95050.1| peptide chain release factor 2 [Pseudomonas sp. TJI-51] Length = 141 Score = 69.8 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 64/140 (45%), Positives = 94/140 (67%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 L + + ++ + L D LL++A+EE+D + + L+ ++ + +F + SGE Sbjct: 2 LAQVVETLDKLSNGLGDCQDLLDMAVEENDEGAVGDVVTELEGLEENLAQLEFRRMFSGE 61 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F +E+ +GE AGIK AT+ Sbjct: 62 MDMNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVH 121 Query: 172 IKGPNAYGWLKGEQGVHRLV 191 IKG A+GWL+ E GVHRLV Sbjct: 122 IKGEYAFGWLRTEIGVHRLV 141 >gi|307943084|ref|ZP_07658429.1| putative peptide chain release factor H [Roseibium sp. TrichSKD4] gi|307773880|gb|EFO33096.1| putative peptide chain release factor H [Roseibium sp. TrichSKD4] Length = 217 Score = 69.8 bits (169), Expect = 6e-10, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 1/201 (0%) Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169 ++ A L V +G G E + +++L T A K + E +G SA Sbjct: 5 CTDKTDTARLLVTSGDGPRECRRAVSLVLARITTEAAKLRVNVEETLSTEGPNQDPASAI 64 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 L + G +A K G R SP+ + +R F ++ + +S SD + Sbjct: 65 LRLSGKDASEIAKRWTGTIRWTCQSPFRPHHKRKNWFVGVFALA-TERDQTETLSPSDLK 123 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +T+RA G GGQH NTTDSAVR+TH+PTG+ V + ERSQH+N+A A N L +LY L Sbjct: 124 FETFRAGGPGGQHQNTTDSAVRLTHLPTGLSVVARDERSQHRNRAAALNRLHDRLYLLAA 183 Query: 290 QKREEIANIGESSKTEIGWGR 310 + + ++ G Sbjct: 184 EADAGAKSSENLLHRQLERGN 204 >gi|221065979|ref|ZP_03542084.1| peptide chain release factor H [Comamonas testosteroni KF-1] gi|220711002|gb|EED66370.1| peptide chain release factor H [Comamonas testosteroni KF-1] Length = 195 Score = 69.8 bits (169), Expect = 7e-10, Method: Composition-based stats. Identities = 46/191 (24%), Positives = 79/191 (41%), Gaps = 7/191 (3%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +++ + G E + + LR + E LE ++L++ Sbjct: 4 MQLSSAHGPAECEYALQLTLRKLLQACAAEDLAVEVLEEFRTPAG---YRSVLLRCERET 60 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 L+ G + + SP+ R F ++ + + + + + +ASG Sbjct: 61 PALREWLGTIQWIFASPFRPRHPRKNWFVAVQRC----EPPRQLTMDGEIQFQSCKASGK 116 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVNTTDSAV H+P+G+ V+ ERSQH NK A +L KL + + + + Sbjct: 117 GGQHVNTTDSAVHALHVPSGMAVKVMSERSQHANKQLARELLAIKLARHNARSQGQAQRL 176 Query: 299 GESSKTEIGWG 309 E+ G Sbjct: 177 RSQQHREVERG 187 >gi|323355075|gb|EGA86905.1| Mrf1p [Saccharomyces cerevisiae VL3] Length = 201 Score = 69.4 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 61/160 (38%), Positives = 84/160 (52%), Gaps = 8/160 (5%) Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA- 163 + L + LE+ G GG E+ + LL MY +A RK+K + ++ E Sbjct: 33 KLLPPHPFADKPSLLELRPGVGGIEAMIFTQNLLDMYIGYANYRKWKYRIISKNENESGS 92 Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI---- 219 GI A L I+ +Y L+ E GVHR+ RI ++ R HTS +++ V P + D Sbjct: 93 GIIDAILSIEEAGSYDRLRFEAGVHRVQRIPSTETKGRTHTSTAAVVVLPQIGDESAKSI 152 Query: 220 ---EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256 E + R+D RASG GGQHVNTTDSAVR+THIP Sbjct: 153 DAYERTFKPGEIRVDIMRASGKGGQHVNTTDSAVRLTHIP 192 >gi|149197057|ref|ZP_01874109.1| peptide chain release factor-like protein [Lentisphaera araneosa HTCC2155] gi|149139603|gb|EDM28004.1| peptide chain release factor-like protein [Lentisphaera araneosa HTCC2155] Length = 203 Score = 69.4 bits (168), Expect = 7e-10, Method: Composition-based stats. Identities = 44/197 (22%), Positives = 81/197 (41%), Gaps = 4/197 (2%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD-GEEAGIKSATLLIKGPNA 177 ++ +G G E + + +++ R AE + E ++ E+ +S + ++G Sbjct: 5 IQFSSGQGPRECERVLWHIFKIFCREAEDENIQCELIKAEKGSEKNSFRSLLISLEGNQL 64 Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237 K +G SP+ + +R F + E+ S + + R SG Sbjct: 65 ETLRKNWEGSLLWRAPSPFRPHHKRRNWFVQA---SFFAIPAKAELDLSQIKFEAQRGSG 121 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297 GGQHVN +A+R + P + + C +ERSQ++NK A + L QK E + Sbjct: 122 PGGQHVNKCATAIRAYYAPLQLSILCNEERSQYRNKMLAMARVLEALNLHHSQKEGEESK 181 Query: 298 IGESSKTEIGWGRQIRS 314 ++ G R+ Sbjct: 182 AQRQKHYQLERGNPCRT 198 >gi|71032615|ref|XP_765949.1| peptide chain release factor 1 [Theileria parva strain Muguga] gi|68352906|gb|EAN33666.1| peptide chain release factor 1, putative [Theileria parva] Length = 216 Score = 69.4 bits (168), Expect = 8e-10, Method: Composition-based stats. Identities = 48/153 (31%), Positives = 82/153 (53%), Gaps = 17/153 (11%) Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-----------IEIEISESDCRID 231 E GVH++ R+ + + R H+S +++ V P +EI+ SD Sbjct: 48 REGGVHQVKRVPMTEKSGRMHSSTATVAVLPSEMAKGRGTNNFEDVLEAVEINPSDIEWK 107 Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 T RASG GGQ+VN ++AV + H PTG+ V+C +ERSQ KNK A LR ++ + +++ Sbjct: 108 TCRASGPGGQNVNKVETAVSLYHKPTGIKVECSEERSQGKNKELALKKLREEIARIRIEE 167 Query: 292 REEIANIGESSKTEIGWGRQIRSY-VLQPYQMV 323 A + K+++ + I++Y L Y+++ Sbjct: 168 MFSEARVR--RKSQVHF---IQNYSTLHIYKLI 195 >gi|300693607|ref|YP_003749580.1| peptide chain release factor homolog protein [Ralstonia solanacearum PSI07] gi|299075644|emb|CBJ34941.1| putative peptide chain release factor homolog protein [Ralstonia solanacearum PSI07] Length = 207 Score = 69.1 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 54/195 (27%), Positives = 82/195 (42%), Gaps = 6/195 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175 L+ + G E + L R + + + E +E DGE G +SA + ++G Sbjct: 2 ILLQFSSAQGPVECELAVVKALAYLQRESAQAGVRVEVIEQEDGERPGTLRSALVSLEGD 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 + +G + SPY R F + + S+ R +T R+ Sbjct: 62 AEAAAAQRWEGTIQWTSPSPYRPRHARKNWFFGVARC-----ATPAVTLPSEIRFETTRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN T+SAVR H+ TG+ V+ Q ERSQH NK A +L KL + Sbjct: 117 SGPGGQHVNKTESAVRAIHMATGISVKVQTERSQHANKRLAVLLLAHKLASHDEAMNAAQ 176 Query: 296 ANIGESSKTEIGWGR 310 + ++ G Sbjct: 177 RAQRRTLHRQVERGN 191 >gi|225023353|ref|ZP_03712545.1| hypothetical protein EIKCOROL_00211 [Eikenella corrodens ATCC 23834] gi|224943831|gb|EEG25040.1| hypothetical protein EIKCOROL_00211 [Eikenella corrodens ATCC 23834] Length = 204 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 62/194 (31%), Positives = 84/194 (43%), Gaps = 5/194 (2%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 YL++ G E Q +A L+ R AE + E LE + GI SA L + G Sbjct: 2 IYLQISTAQGPAECQMFARFALQKILREAEAAGVEAEILEQTPSKH-GILSAVLKLSGSR 60 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 A G QG + V SP R + ++ P I T RA Sbjct: 61 AESLATGWQGTLQWVCPSPLRPQHPRKNWYIGVFRLP----EIPALPESEGIEFQTCRAG 116 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQHVN T+SAVR H+ +G+ V+ + ERSQH NK +A +L KL E + A Sbjct: 117 GKGGQHVNKTESAVRAVHLASGIAVRAEGERSQHANKKRALGLLALKLAEHHQTALRQHA 176 Query: 297 NIGESSKTEIGWGR 310 S ++ G Sbjct: 177 ADAHKSLYQVERGN 190 >gi|268592903|ref|ZP_06127124.1| putative peptide chain release factor H [Providencia rettgeri DSM 1131] gi|291311693|gb|EFE52146.1| putative peptide chain release factor H [Providencia rettgeri DSM 1131] Length = 203 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 56/194 (28%), Positives = 86/194 (44%), Gaps = 6/194 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 L+ + G E L + + A+K + LE G+KSA + ++G N Sbjct: 2 ILLQFSSAQGPEECCIAVEKALACFFQEAKKLSVIADTLEFFPSRY-GLKSALISLEGEN 60 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 A + G + S +R F S+ + + + S+ + +A Sbjct: 61 AEILSQKWTGTIQWQCQSQIRPRHKRKNWFLSVTRFSPIKPIED-----SEIEFEFTKAQ 115 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 GAGGQHVN T SAVR H+ TG+ V+ Q ERSQH NK A +++ KL E + Q+ E+ Sbjct: 116 GAGGQHVNKTSSAVRAKHVATGITVKVQSERSQHANKKLAKQLIQWKLNEHQSQQLNELD 175 Query: 297 NIGESSKTEIGWGR 310 S +I G Sbjct: 176 KQRHHSHYQIERGN 189 >gi|167948499|ref|ZP_02535573.1| hypothetical protein Epers_18991 [Endoriftia persephone 'Hot96_1+Hot96_2'] gi|110589280|gb|ABG77149.1| hypothetical protein [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 153 Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats. Identities = 64/128 (50%), Positives = 83/128 (64%) Query: 95 IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154 + + +F + SGE D ++A+L++ AG+GGTE+QDWA MLLRMY RW E FKTE Sbjct: 2 FEQRIAELEFRRMFSGEMDPSNAFLDIQAGSGGTEAQDWAEMLLRMYLRWGEAHGFKTEL 61 Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214 +E GE AGIKSAT+ +G A+GWL+ E GVHRLVR SP+DS +RRHTSFS+ Sbjct: 62 MEASPGEVAGIKSATIRFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSASVCLAG 121 Query: 215 VDDSIEIE 222 Sbjct: 122 NRRLDRDR 129 >gi|253689801|ref|YP_003018991.1| peptide chain release factor H [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756379|gb|ACT14455.1| peptide chain release factor H [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 207 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 6/195 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175 L++ A G E L+ + A ++ + E +E +G+ +G +SA +L+ G Sbjct: 2 ILLQLSAAQGPDECMLATAKALQALIQDAARQGIECEIIETEEGKRSGTLRSALVLLNGD 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 G + SP+ R F + + E ++++ R + ++ Sbjct: 62 RTEPLAASWCGTLQWTCNSPWRKGGGRKNWFIGVARF-----HQEQAFADNEIRFEATKS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN T+SAVR TH+ +G+ V+ Q ERSQH NK A ++ +L L+ Q+ E+ Sbjct: 117 SGPGGQHVNKTESAVRATHVASGITVKVQSERSQHANKRLACYLIAYRLKALQQQQHAEL 176 Query: 296 ANIGESSKTEIGWGR 310 +I G Sbjct: 177 RAQRRLFHHQIERGN 191 >gi|69249982|ref|ZP_00605073.1| PCRF [Enterococcus faecium DO] gi|68194043|gb|EAN08594.1| PCRF [Enterococcus faecium DO] Length = 139 Score = 68.3 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 41/134 (30%), Positives = 71/134 (52%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + A+ ++ E + + L + +++E+ EE D ++ +E Sbjct: 1 MAEPGFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVEMLQEEPDAAMQEEAE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149 + + +++ + LL G D N+A +E+H GAGGTESQDW +MLLRMYTRWAE+ Sbjct: 61 TRINALDEKMKTYELSMLLDGPYDRNNAIVELHPGAGGTESQDWGSMLLRMYTRWAEQHG 120 Query: 150 FKTEALEIHDGEEA 163 ++ E L+ + Sbjct: 121 YQVETLDYQKSQXG 134 >gi|46203521|ref|ZP_00208999.1| COG1186: Protein chain release factor B [Magnetospirillum magnetotacticum MS-1] Length = 51 Score = 68.3 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 25/38 (65%), Positives = 31/38 (81%) Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354 LQPYQ+VKDLRT + T P +VLDGDLD FM+A+LA + Sbjct: 2 LQPYQLVKDLRTGTQSTDPDEVLDGDLDPFMEASLAQR 39 >gi|323486906|ref|ZP_08092222.1| hypothetical protein HMPREF9474_03973 [Clostridium symbiosum WAL-14163] gi|323691951|ref|ZP_08106201.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673] gi|323399769|gb|EGA92151.1| hypothetical protein HMPREF9474_03973 [Clostridium symbiosum WAL-14163] gi|323504009|gb|EGB19821.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673] Length = 197 Score = 68.3 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 45/199 (22%), Positives = 78/199 (39%), Gaps = 12/199 (6%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 +++ +G G E + A + R + + G K+ Sbjct: 1 MRIQISSGQGPAECELAAELFYRQLQKEIGDIRMV--------QCVRGSKAKGFSSVIFE 52 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 + +G V SPY +R + + + +++ E R +T+R+ Sbjct: 53 TEEDMSSLEGSILWVCKSPYRPKHKRKNWYIDVSIL----ENMPKLTQELKLRFETFRSG 108 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQ+VN ++ VR+ HIPTG+ V + RSQH NK A N L L E ++ + Sbjct: 109 GKGGQNVNKVETGVRVIHIPTGISVVSTEARSQHMNKKLAVNRLCDILAERNMESGRKEK 168 Query: 297 NIGESSKTEIGWGRQIRSY 315 + + G +R Y Sbjct: 169 ELAWLEHNRLERGNPVRIY 187 >gi|89093039|ref|ZP_01165990.1| peptide chain release factor 2 [Oceanospirillum sp. MED92] gi|89082689|gb|EAR61910.1| peptide chain release factor 2 [Oceanospirillum sp. MED92] Length = 207 Score = 67.9 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 9/201 (4%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGP 175 L++ AG G E + L+ + A+ + + + E+ G KS L Sbjct: 2 ILLQLSAGQGPDECAYAVGLALKQLDKDAKAQAVSIKLISGTPSEKRGGYKSLLLQCDAD 61 Query: 176 NAYG---WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 + + + QGV + SP+ +R F S VY I E ++ + T Sbjct: 62 SPQRAKQFAETWQGVLLWICQSPFRPKHKRKNWFFSGQVY-----EIAEETNDGEITYQT 116 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASGAGGQHVNTTDSAVR TH+ +G+ V+ + ERSQH NK A ++ KL E +++ Sbjct: 117 CRASGAGGQHVNTTDSAVRATHVSSGISVRVESERSQHANKRLAKLLILQKLAEQVREEQ 176 Query: 293 EEIANIGESSKTEIGWGRQIR 313 + E+ G R Sbjct: 177 SRLDKAHWLQHQELERGNPAR 197 >gi|160935130|ref|ZP_02082513.1| hypothetical protein CLOBOL_00025 [Clostridium bolteae ATCC BAA-613] gi|158441861|gb|EDP19558.1| hypothetical protein CLOBOL_00025 [Clostridium bolteae ATCC BAA-613] Length = 198 Score = 67.9 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 12/199 (6%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 +++ +G G E + ML + A + G G K + Sbjct: 1 MRVQISSGQGPAECELAVAMLYEELRKEAGDVRLV--------GCTPGKKPGCMSSVVFE 52 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 L+ +G + + SPY RR + + + V E + R +T+R+ Sbjct: 53 TDRDLRELEGSVQWICKSPYRPGHRRKNWYVDVSILDQVPRISEERM----VRFETFRSG 108 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQHVN ++ VR HIPTG V Q RSQH NK A + L + L E+ + +++ Sbjct: 109 GKGGQHVNKVETGVRAIHIPTGTAVVSTQARSQHMNKQIAMDRLCSILAEMNARNQQKEK 168 Query: 297 NIGESSKTEIGWGRQIRSY 315 ++ + G +R Y Sbjct: 169 SLAWMEHARLERGNPVRIY 187 >gi|264679478|ref|YP_003279385.1| class I peptide chain release factor [Comamonas testosteroni CNB-2] gi|262209991|gb|ACY34089.1| Class I peptide chain release factor [Comamonas testosteroni CNB-2] Length = 195 Score = 67.5 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 47/194 (24%), Positives = 80/194 (41%), Gaps = 7/194 (3%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +++ + G E + + LR + E LE ++L++ Sbjct: 4 MQLSSAHGPAECEYALQLTLRKLLQACAAEDLAVEVLEEFRTPAG---YRSVLLRCERET 60 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 L+ G + + SP+ R F ++ + + + + +ASG Sbjct: 61 PALREWLGTIQWIFASPFRPRHPRKNWFVAVQRCEPPRQLAM----DGEIQFQSCKASGK 116 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVNTTDSAV H+P+G+ V+ ERSQH NK A +L KL + + + + Sbjct: 117 GGQHVNTTDSAVHALHVPSGIAVKVMSERSQHANKRLARELLAIKLAQHNARSEGQAQRL 176 Query: 299 GESSKTEIGWGRQI 312 E+ G+ I Sbjct: 177 RSQQHWEVERGQAI 190 >gi|225390312|ref|ZP_03760036.1| hypothetical protein CLOSTASPAR_04065 [Clostridium asparagiforme DSM 15981] gi|225043636|gb|EEG53882.1| hypothetical protein CLOSTASPAR_04065 [Clostridium asparagiforme DSM 15981] Length = 196 Score = 67.5 bits (163), Expect = 3e-09, Method: Composition-based stats. Identities = 49/202 (24%), Positives = 78/202 (38%), Gaps = 15/202 (7%) Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 D +++ +G G E + + + R E + + + G G S L Sbjct: 1 MADMRIQISSGQGPEECELAVGLFYQALRREVE----EIQMVSCVKGRRGGFSSVVLEAD 56 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G V SP +R + + + + I E R +T+ Sbjct: 57 WSGLEG-------SVLWVCKSPLRPGHKRKNWYIDVSIL----EEIPRTSKEMQVRFETF 105 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 R+ G GGQ+VN ++ VR+ HIPTG+ V + RSQH NK A N L L + +LQ Sbjct: 106 RSGGKGGQNVNKVETGVRVVHIPTGIAVVSTEARSQHMNKQIALNRLCDILADRDLQCAR 165 Query: 294 EIANIGESSKTEIGWGRQIRSY 315 + + G +R Y Sbjct: 166 REKELAWMEHNRLERGNPVRIY 187 >gi|330467788|ref|YP_004405531.1| peptide chain release factor-like protein [Verrucosispora maris AB-18-032] gi|328810759|gb|AEB44931.1| peptide chain release factor-like protein [Verrucosispora maris AB-18-032] Length = 202 Score = 67.1 bits (162), Expect = 4e-09, Method: Composition-based stats. Identities = 49/200 (24%), Positives = 74/200 (37%), Gaps = 3/200 (1%) Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIK 173 L + AG G E LLR A +++ + ++ G+ G +S + + Sbjct: 1 MTVRLLLSAGRGPQECAWALAHLLRRLEAEAARQRLRVHRVDTVAGDRPGTYRSVLVEVG 60 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G + G SPY + R + + P D ESD + Sbjct: 61 GAGVEAFAASWTGTLCWQAPSPYRAGVGRKNWYVTAQ--PCPADPDATCFEESDVEVVAC 118 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 R G GGQH N +AVR TH PTG+VV ER N+ A +LR +L + Sbjct: 119 RTGGPGGQHRNKVSTAVRATHRPTGLVVVVDTERQFSLNRRIALRLLRQRLANRDETAVR 178 Query: 294 EIANIGESSKTEIGWGRQIR 313 + + G +R Sbjct: 179 DATTARWQLHDRLVRGDPVR 198 >gi|331001770|ref|ZP_08325292.1| peptide chain release factor H [Lachnospiraceae oral taxon 107 str. F0167] gi|330412744|gb|EGG92127.1| peptide chain release factor H [Lachnospiraceae oral taxon 107 str. F0167] Length = 200 Score = 66.4 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 53/199 (26%), Positives = 82/199 (41%), Gaps = 9/199 (4%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 L++ AG G E Q + R + AG + T L Sbjct: 1 MILQLSAGMGPVECQRAVFGICRELMKEI--------PSPEILNYVAGAEDETFLSVMLY 52 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 + + +G + S Y +R F + + P + E SE+D RI+ + A+ Sbjct: 53 SKQDVSYLEGSMLWICKSKYRPWHKRKNWFIDVSIIPETTEMEEN-FSENDLRIEKFHAN 111 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQ+VN ++ VR+ HIP+G+ V +ERSQ NK A L L ++ + Sbjct: 112 GPGGQNVNKVETGVRVIHIPSGIRVSSTRERSQLLNKKDAIRKLAIVLKSRNDFEKVKSR 171 Query: 297 NIGESSKTEIGWGRQIRSY 315 N S +EI G +R Y Sbjct: 172 NNAWSKHSEIVRGNPVRIY 190 >gi|207109871|ref|ZP_03244033.1| peptide chain release factor 2 [Helicobacter pylori HPKX_438_CA4C1] Length = 130 Score = 66.4 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 74/113 (65%), Positives = 90/113 (79%) Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA++L RMY RWAE+R FK+E L+ DGEEAGIK +IKG NAYG+LK E GVHRLVR Sbjct: 1 WASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNESGVHRLVR 60 Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245 ISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN Sbjct: 61 ISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNK 113 >gi|269119386|ref|YP_003307563.1| peptide chain release factor H [Sebaldella termitidis ATCC 33386] gi|268613264|gb|ACZ07632.1| peptide chain release factor H [Sebaldella termitidis ATCC 33386] Length = 206 Score = 66.0 bits (159), Expect = 8e-09, Method: Composition-based stats. Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 2/194 (1%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 + + +G G E + + + K + +E G +A +++++ Sbjct: 1 MRMIISSGNGPQECEKAVYEYFKYLKKEFAKYNIEYRYIESEAGNKA-KTFRSVVLQIKE 59 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 + G + S Y N RR + V ++ + IS+ I T R+S Sbjct: 60 NTKFTNIYTGTILWINESIYRKNHRRKNWYIKS-VLIKENEFLNKSISKKTTEITTMRSS 118 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQ+VN ++AVRI HIPTG+ + ++ER+Q+ NK A L KL +E+ ++E Sbjct: 119 GNGGQNVNKLETAVRIKHIPTGISIVSREERTQYANKKAAVKKLEEKLTNMEIYHQKEEE 178 Query: 297 NIGESSKTEIGWGR 310 S K EI G Sbjct: 179 MKIWSVKNEIERGN 192 >gi|301631891|ref|XP_002945028.1| PREDICTED: hypothetical protein LOC100485311 [Xenopus (Silurana) tropicalis] Length = 782 Score = 66.0 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 71/189 (37%), Gaps = 2/189 (1%) Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184 E + + LR R A+ + A WL Sbjct: 589 VRPAECERAVAITLRALLRDAQAHAIALAVAQEVATAAGFKSVLLQGAASAAALQWLATW 648 Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 QG + V SP+ RR F V + + RASG GGQHVN Sbjct: 649 QGSVQCVFTSPWRPGHRRKNWFVG--VQRCAAPETVAGLDDGAIVYQACRASGKGGQHVN 706 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAV H+ +G+ V+ ERSQH NK A ++ +L E + + E+ T Sbjct: 707 TTDSAVHALHLASGIAVKVMGERSQHANKRLARALIALRLAERQTAQAEDAGRQRRLQHT 766 Query: 305 EIGWGRQIR 313 + GR +R Sbjct: 767 AVQRGRPVR 775 >gi|162455289|ref|YP_001617656.1| putative peptide chain release factor homolog protein [Sorangium cellulosum 'So ce 56'] gi|161165871|emb|CAN97176.1| putative peptide chain release factor homolog protein [Sorangium cellulosum 'So ce 56'] Length = 222 Score = 66.0 bits (159), Expect = 9e-09, Method: Composition-based stats. Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 7/207 (3%) Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 + +++++ AG G E + + L ++R + +H E+A + ++ Sbjct: 1 MSRSWVQISAGRGPIEVRRFVARLAERMEALCQERGLAVVDVTLHGDEDAPA--SVEILV 58 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV-----YPVVDDSIEIEISESDC 228 +A L+GE G H LV S + R F+ + + + + + Sbjct: 59 EGDARRCLEGELGTHALVERSAARGKAARKRWFAGVAIHAAGADAGAGAGEGVGVDLREL 118 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 I RASG GGQHVN T SAVRI H P+G+ V+ ERSQ N + + +L E Sbjct: 119 EISACRASGPGGQHVNKTLSAVRIHHRPSGITVRVADERSQRANVRRGVERIAERLAERA 178 Query: 289 LQKREEIANIGESSKTEIGWGRQIRSY 315 ++ E S I G +R+Y Sbjct: 179 ARRVAEGEAARWSEHDRIVRGEPVRTY 205 >gi|220679233|emb|CAX12804.1| novel protein similar to H.sapiens MTRF1L, mitochondrial translational release factor 1-like (MTRF1L) [Danio rerio] Length = 273 Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 6/166 (3%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 L + + IK+++ + + + +L + D L + E + L E Sbjct: 110 LAHLVHNIKKLEVKQKEMEDMQDLLKDNDP------ELLELAETEKEAVLADIQDLRQKE 163 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 +D ++ LEV AG GG E+ + + MY +A + + LE + E G++ A+ Sbjct: 164 SDMSELVLEVSAGVGGQEAMLFTAEIFEMYQNYAAFNGWSFDVLEANASELGGVRHASAS 223 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217 + GP +Y LK E GVHR+ R+ +S R HTS ++ + P + Sbjct: 224 VSGPLSYKKLKFEAGVHRVQRVPKTESKGRTHTSTMTVAILPQPTE 269 >gi|213161326|ref|ZP_03347036.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 42 Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 1/41 (2%) Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 RSYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 1 RSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 40 >gi|239835036|ref|ZP_04683364.1| Peptide chain release factor 2 [Ochrobactrum intermedium LMG 3301] gi|239823099|gb|EEQ94668.1| Peptide chain release factor 2 [Ochrobactrum intermedium LMG 3301] Length = 136 Score = 65.6 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 1/134 (0%) Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 + LV SP +R F S+ + + I +D R +T RA G GGQH Sbjct: 4 WLTRYLLVFKSPVRPQHKRQHWFISVSRIARPAINDIV-IQPNDVRFETLRAGGPGGQHQ 62 Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 NT+DSAVR+ HIPTG+ + + ERSQH+NKA A L L L+ + E + Sbjct: 63 NTSDSAVRVVHIPTGIQLIARNERSQHRNKATALERLEMVLKHLQEDEIENAEAVRHHEN 122 Query: 304 TEIGWGRQIRSYVL 317 I G +++++ Sbjct: 123 RNIERGNEVKTFRF 136 >gi|281414236|ref|ZP_06245978.1| peptide chain release factor 2 [Micrococcus luteus NCTC 2665] Length = 107 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 44/95 (46%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L L + + D D ++ L + P LW + EA+ + + H + I + Sbjct: 13 LRHTLASIEQVSDLDRIKADIAELEQQASAPDLWDDPEEAQKVTSKLSHRQTDLKRITSL 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKL 97 + R+ D ++ELA EED+ S+L + + L I+ Sbjct: 73 ESRIEDLETMVELAAEEDEPSLLDDANQELTSIRK 107 >gi|331645440|ref|ZP_08346544.1| putative peptide chain release factor H [Escherichia coli M605] gi|331045602|gb|EGI17728.1| putative peptide chain release factor H [Escherichia coli M605] Length = 232 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 6/204 (2%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATL 170 + L++ + G E L + A ++ LE G + ++SA + Sbjct: 25 REKRMILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALI 84 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 + G NA+ + G + + SPY + R F I + + + Sbjct: 85 SLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIHY 139 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + + Sbjct: 140 ETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQE 199 Query: 291 KREEIANIGESSKTEIGWGRQIRS 314 + + +I G R+ Sbjct: 200 NSAALKSQRRMFHHQIERGNPRRT 223 >gi|317491073|ref|ZP_07949509.1| RF-1 domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920620|gb|EFV41943.1| RF-1 domain-containing protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 205 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 6/198 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL-LIKGP 175 L++ + G E + L+ + A K E AG + L + G Sbjct: 2 ILLQISSAQGPDECALAVALALKQLQKEAAALGVKVTVAEQEPARRAGTLRSVLLSLDGD 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A G + SP+ + R F + E + E + + ++ ++ Sbjct: 62 AAEHISNTWCGTLQWTCESPWRGGNGRKNWFIGV-----ARYCFEDVVIEGEIKFESLKS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN T+SA+R TH+ +G+VV+ Q ERSQH NK A ++ KL + + + EI Sbjct: 117 SGPGGQHVNKTESAIRATHLASGIVVKVQTERSQHANKRLAKLLIAHKLEQQQQNMQSEI 176 Query: 296 ANIGESSKTEIGWGRQIR 313 +I G +R Sbjct: 177 KAQRRMFHHQITRGNPVR 194 >gi|227357000|ref|ZP_03841372.1| peptide chain release factor [Proteus mirabilis ATCC 29906] gi|227162878|gb|EEI47837.1| peptide chain release factor [Proteus mirabilis ATCC 29906] Length = 203 Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats. Identities = 54/194 (27%), Positives = 79/194 (40%), Gaps = 6/194 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 L+ + G E L + E+R+ LE G+KS + +KG Sbjct: 1 MLLQFSSAQGPEECCIAVEKTLNYFLTVTEQRQVDVIILEQEPSRY-GLKSVLVSLKGAE 59 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 A + G + S +R F I EI +++ +T RA+ Sbjct: 60 AKAIAQQWSGTVQWQCTSTLRPKHKRKNWFIGI-----AYFEPPQEIQDTEILFETMRAN 114 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQHVN T SAVR THI TG+ V+ Q +RSQH NK A ++ L Q++ Sbjct: 115 GPGGQHVNKTSSAVRATHIATGISVKIQSQRSQHANKKLAKQLIAWHLNHYLSQQQASFN 174 Query: 297 NIGESSKTEIGWGR 310 N + + G Sbjct: 175 NQRHLAHHRVIRGN 188 >gi|266622646|ref|ZP_06115581.1| putative peptide chain release factor H [Clostridium hathewayi DSM 13479] gi|288865627|gb|EFC97925.1| putative peptide chain release factor H [Clostridium hathewayi DSM 13479] Length = 206 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 47/199 (23%), Positives = 77/199 (38%), Gaps = 12/199 (6%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 +++ +G G E + +L R A + + G K Sbjct: 1 MRIQISSGQGPAECELAVGLLYEELKREAPDIRLLSFTQ--------GKKREGFSSIMFE 52 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 +G + SPY +R + + + +++ E R +T+++ Sbjct: 53 TEHDFTSLEGSVLWICKSPYRPEHKRKNWYVDVSIL----ETVPRVTEEKLVRFETFKSG 108 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQ+VN ++ VR HIPTG V + RSQH NK A N L L E+ L+ Sbjct: 109 GKGGQNVNKVETGVRAIHIPTGTAVVSTEARSQHMNKQAALNRLCEILAEMNLESGRREK 168 Query: 297 NIGESSKTEIGWGRQIRSY 315 N+ T + G +R Y Sbjct: 169 NLAWMEHTRLERGNPVRVY 187 >gi|170684096|ref|YP_001742396.1| peptide chain release factor-like protein [Escherichia coli SMS-3-5] gi|170521814|gb|ACB19992.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli SMS-3-5] Length = 204 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 6/199 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175 L++ + G E L + A ++ LE G ++SA + + G Sbjct: 2 ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAITVLETEAGRYPDTMRSALISLDGD 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 NA+ + G + + SPY + R F I + + + R +T R+ Sbjct: 62 NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRYETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + + + Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAAL 176 Query: 296 ANIGESSKTEIGWGRQIRS 314 + +I G R+ Sbjct: 177 KSQRRMFHHQIERGNPRRT 195 >gi|330910076|gb|EGH38586.1| hypothetical protein ECAA86_00359 [Escherichia coli AA86] Length = 204 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 6/199 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175 L++ + G E L + A ++ LE G + ++SA + + G Sbjct: 2 ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALISLDGD 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 NA+ + G + + SPY + R F I + + + +T R+ Sbjct: 62 NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIHYETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + + + Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAAL 176 Query: 296 ANIGESSKTEIGWGRQIRS 314 + +I G R+ Sbjct: 177 KSQRRMFHHQIERGNPRRT 195 >gi|117622538|ref|YP_851451.1| peptide chain release factor-like protein [Escherichia coli APEC O1] gi|115511662|gb|ABI99736.1| peptide chain release factor-like protein [Escherichia coli APEC O1] Length = 232 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 6/204 (2%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATL 170 + L++ + G E L + A ++ LE G + ++SA + Sbjct: 25 REKRMILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALI 84 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 + G NA+ + G + + SPY + R F I + + + R Sbjct: 85 SLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRY 139 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + + Sbjct: 140 ETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQE 199 Query: 291 KREEIANIGESSKTEIGWGRQIRS 314 + + +I G R+ Sbjct: 200 NSAALKSQRRMFHHQIERGNPRRT 223 >gi|163754646|ref|ZP_02161768.1| putative peptide chain release factor [Kordia algicida OT-1] gi|161325587|gb|EDP96914.1| putative peptide chain release factor [Kordia algicida OT-1] Length = 198 Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 7/191 (3%) Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 N ++++ +G+G E L +R E + + Sbjct: 3 NQFWVQISSGSGPEECCLAVKYLTEKLSRLPNYTFNVIELVATKYQNYKSVWLRATG--- 59 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 ++ + QG + + SPY ++ +R F + VY + +I S + ++ T R Sbjct: 60 -DSAEFKNHWQGSIQFIFRSPYRAHHQRKNWFVDVKVYVMPT---QISWSPKEIQVKTAR 115 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 +SGAGGQHVN ++AV + HIPTG+ VQ +ERSQ NK A+ L + +++ Sbjct: 116 SSGAGGQHVNKVETAVSMIHIPTGITVQASEERSQFLNKKLAFARLDIAIKAQNQKQQNA 175 Query: 295 IANIGESSKTE 305 I + Sbjct: 176 IEKQKWMQHKQ 186 >gi|293403381|ref|ZP_06647472.1| prfH [Escherichia coli FVEC1412] gi|293408390|ref|ZP_06652229.1| peptide chain release factor H [Escherichia coli B354] gi|298378993|ref|ZP_06988874.1| prfH [Escherichia coli FVEC1302] gi|300898963|ref|ZP_07117256.1| putative peptide chain release factor H [Escherichia coli MS 198-1] gi|59889806|emb|CAH19162.1| Probable peptide chain release factor [Escherichia coli] gi|284920069|emb|CBG33127.1| putative peptide chain release factor [Escherichia coli 042] gi|291429234|gb|EFF02254.1| prfH [Escherichia coli FVEC1412] gi|291471568|gb|EFF14051.1| peptide chain release factor H [Escherichia coli B354] gi|298280106|gb|EFI21610.1| prfH [Escherichia coli FVEC1302] gi|300357405|gb|EFJ73275.1| putative peptide chain release factor H [Escherichia coli MS 198-1] Length = 204 Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 6/199 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175 L++ + G E L + A ++ LE G + ++SA + + G Sbjct: 2 ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAITVLETETGRYSDTLRSALISLDGD 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 NA+ + G + + SPY + R F I + + + R +T R+ Sbjct: 62 NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRYETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + + + Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAAL 176 Query: 296 ANIGESSKTEIGWGRQIRS 314 + +I G R+ Sbjct: 177 KSQRRMFHHQIERGNPRRT 195 >gi|302857242|ref|XP_002959826.1| hypothetical protein VOLCADRAFT_101339 [Volvox carteri f. nagariensis] gi|300254224|gb|EFJ39110.1| hypothetical protein VOLCADRAFT_101339 [Volvox carteri f. nagariensis] Length = 194 Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 55/102 (53%), Positives = 71/102 (69%), Gaps = 1/102 (0%) Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 YG L E GVHR+ R+ ++ R HTS ++ V P D +++++ + D RI+T RAS Sbjct: 94 VYGTLLPESGVHRVQRVPVTEAQGRVHTSTVAVVVLPQ-ADEVDVKLRDEDLRIETMRAS 152 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 GAGGQHVN TDSAVRITH+PTG+VV CQ ERSQH N+A A Sbjct: 153 GAGGQHVNVTDSAVRITHVPTGLVVSCQNERSQHLNRAAALK 194 >gi|104779685|ref|YP_606183.1| peptide chain release factor-like protein [Pseudomonas entomophila L48] gi|95108672|emb|CAK13366.1| putative peptide chain release factor [Pseudomonas entomophila L48] Length = 206 Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 56/195 (28%), Positives = 75/195 (38%), Gaps = 6/195 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL-LIKGP 175 L++ A G E L A+ + LE G G + L + G Sbjct: 2 ILLQLSAAQGPDECALAVAKALLRLQAEADAQAVAVRILEEEPGPRRGTLRSVLLALDGE 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A G + SPY R F + S+ +T R+ Sbjct: 62 QAERLADHWTGSLQWTCSSPYRPGHARKNWFFGGARFAPPAPE-----LASEIHFETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVNTTDSAVR TH+ +GV V+ Q ERSQH NK A ++ +L + Q E+ Sbjct: 117 SGPGGQHVNTTDSAVRATHLASGVSVKVQSERSQHANKRLALLLIGQRLAQQAEQVDSEL 176 Query: 296 ANIGESSKTEIGWGR 310 I G Sbjct: 177 RAERRLFHHRIERGN 191 >gi|301019126|ref|ZP_07183330.1| putative peptide chain release factor H [Escherichia coli MS 69-1] gi|300399385|gb|EFJ82923.1| putative peptide chain release factor H [Escherichia coli MS 69-1] Length = 204 Score = 64.1 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 6/199 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175 L++ + G E L + A ++ LE G + ++SA + + G Sbjct: 2 ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALVSLDGD 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 NA+ + G + + SPY + R F I + + + R +T R+ Sbjct: 62 NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRYETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + + + Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQKNSAAL 176 Query: 296 ANIGESSKTEIGWGRQIRS 314 + +I G R+ Sbjct: 177 KSQRRMFHHQIERGNPRRT 195 >gi|312964708|ref|ZP_07778959.1| putative peptide chain release factor H [Escherichia coli 2362-75] gi|312290729|gb|EFR18607.1| putative peptide chain release factor H [Escherichia coli 2362-75] Length = 204 Score = 64.1 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 6/199 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175 L++ + G E L + A ++ LE G + ++SA + + G Sbjct: 2 ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGD 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 NA+ + G + + SPY + R F I + + + R +T R+ Sbjct: 62 NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRYETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + + + Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAAL 176 Query: 296 ANIGESSKTEIGWGRQIRS 314 + +I G R+ Sbjct: 177 KSQRRMFHHQIERGNPRRT 195 >gi|237707745|ref|ZP_04538226.1| peptide chain release factor 2 [Escherichia sp. 3_2_53FAA] gi|306813274|ref|ZP_07447467.1| peptide chain release factor-like protein [Escherichia coli NC101] gi|91070898|gb|ABE05779.1| peptide chain release factor-like protein [Escherichia coli UTI89] gi|226898955|gb|EEH85214.1| peptide chain release factor 2 [Escherichia sp. 3_2_53FAA] gi|281177449|dbj|BAI53779.1| peptide chain release factor [Escherichia coli SE15] gi|294492701|gb|ADE91457.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli IHE3034] gi|305854037|gb|EFM54476.1| peptide chain release factor-like protein [Escherichia coli NC101] gi|307628262|gb|ADN72566.1| peptide chain release factor-like protein [Escherichia coli UM146] gi|315287746|gb|EFU47149.1| putative peptide chain release factor H [Escherichia coli MS 110-3] gi|320197281|gb|EFW71897.1| peptide chain release factor-like protein [Escherichia coli WV_060327] gi|323953122|gb|EGB48990.1| RF-1 domain-containing protein [Escherichia coli H252] gi|323958696|gb|EGB54397.1| RF-1 domain-containing protein [Escherichia coli H263] gi|324010206|gb|EGB79425.1| putative peptide chain release factor H [Escherichia coli MS 57-2] Length = 204 Score = 64.1 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 6/199 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175 L++ + G E L + A ++ LE G + ++SA + + G Sbjct: 2 ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALISLDGD 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 NA+ + G + + SPY + R F I + + + R +T R+ Sbjct: 62 NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRYETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + + + Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAAL 176 Query: 296 ANIGESSKTEIGWGRQIRS 314 + +I G R+ Sbjct: 177 KSQRRMFHHQIERGNPRRT 195 >gi|191171385|ref|ZP_03032934.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli F11] gi|300991271|ref|ZP_07179531.1| putative peptide chain release factor H [Escherichia coli MS 200-1] gi|110342064|gb|ABG68301.1| putative peptide chain release factor [Escherichia coli 536] gi|190908319|gb|EDV67909.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli F11] gi|300305588|gb|EFJ60108.1| putative peptide chain release factor H [Escherichia coli MS 200-1] gi|324015571|gb|EGB84790.1| putative peptide chain release factor H [Escherichia coli MS 60-1] Length = 204 Score = 64.1 bits (154), Expect = 4e-08, Method: Composition-based stats. Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 6/199 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175 L++ + G E L + A ++ LE G + ++SA + + G Sbjct: 2 ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALISLDGD 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 NA+ + G + + SPY + R F I + + + R +T R+ Sbjct: 62 NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRYETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + + + Sbjct: 117 SGPGGQHVNKTDSAVRATHLSSGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAAL 176 Query: 296 ANIGESSKTEIGWGRQIRS 314 + +I G R+ Sbjct: 177 KSQRRMFHHQIERGNPRRT 195 >gi|313226924|emb|CBY22069.1| unnamed protein product [Oikopleura dioica] Length = 394 Score = 63.7 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 67/285 (23%), Positives = 118/285 (41%), Gaps = 14/285 (4%) Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 + L +N+ A +D + ++ E + + EA+ + +E Sbjct: 69 YLNELSENVAKESDAEMKDLLQEEIKEAEERIGEIEEEVFDVLAEYETEEAEKANFVVE- 127 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 AGAGG E+ +A LL Y + E + E + D E + +++ G NA+ Sbjct: 128 -AGAGGDEAGIFARELLDHYLLFFEFMNWDYEQVN-RDEENGMLTEGHIVVSGLNAFNRN 185 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 E GVHR+ RI + + HTS ++ V P+++ I+I E + I + R SG GGQ Sbjct: 186 LAEAGVHRVARIPQNAT--KLHTSTCAVKVTPILERR-LIDIPEKELDISSCRGSGKGGQ 242 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI--- 298 +NT + + HIP+G+ E ++ A + +L + +++ Sbjct: 243 KINTVHARAVVKHIPSGITTT-YFEPGRNNTLAANIEKAKEELRSILQARQDAEFEREFL 301 Query: 299 --GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 S T G +IR+Y +V D RT + + G Sbjct: 302 GFKNSMNTNFERGERIRNYSWS-NNIVTDYRTKRK-FNLQKYFSG 344 >gi|227538749|ref|ZP_03968798.1| peptide chain release factor family protein [Sphingobacterium spiritivorum ATCC 33300] gi|227241258|gb|EEI91273.1| peptide chain release factor family protein [Sphingobacterium spiritivorum ATCC 33300] Length = 170 Score = 63.7 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 55/171 (32%), Positives = 76/171 (44%), Gaps = 4/171 (2%) Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIK 173 D + V AG G E +++ + A + L+ +G G SA+L I Sbjct: 1 MDKIIGVTAGRGPEECSWVVAQVIKKIIQEAATFDVEVRVLDRQEGSINGTVISASLQIS 60 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G N + G + + S + + +R F ++ + S E D Sbjct: 61 GENCMAFAALWTGTIQWIGKSDFRKSHKRKNWFIEVF---EIKQSASWIFDEKDVGYQAM 117 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 R+SGAGGQHVN SAVR THIPTGV V RSQH+NK A L+ KL Sbjct: 118 RSSGAGGQHVNKVSSAVRATHIPTGVSVVSMDSRSQHQNKKIATKRLQKKL 168 >gi|324114895|gb|EGC08861.1| RF-1 domain-containing protein [Escherichia fergusonii B253] Length = 204 Score = 63.7 bits (153), Expect = 4e-08, Method: Composition-based stats. Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 6/199 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175 L++ + G E L + A ++ LE G + ++SA + + G Sbjct: 2 ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALVSLDGD 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 NA+ + G + + SPY + R F I + + + +T R+ Sbjct: 62 NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIHYETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + + Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQRQENSAAL 176 Query: 296 ANIGESSKTEIGWGRQIRS 314 + +I G R+ Sbjct: 177 KSQRRMFHHQIERGNPRRT 195 >gi|323976247|gb|EGB71340.1| RF-1 domain-containing protein [Escherichia coli TW10509] Length = 204 Score = 63.7 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 6/199 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175 L++ + G E L + A ++ LE G + ++SA + + G Sbjct: 2 ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGD 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 NA+ + G + + SPY + R F I + + + +T R+ Sbjct: 62 NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTSDEQEQSDAIHYETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + + Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQRQENSAAL 176 Query: 296 ANIGESSKTEIGWGRQIRS 314 + +I G R+ Sbjct: 177 KSQRRMFHHQIERGNPRRT 195 >gi|299530560|ref|ZP_07043980.1| Class I peptide chain release factor [Comamonas testosteroni S44] gi|298721536|gb|EFI62473.1| Class I peptide chain release factor [Comamonas testosteroni S44] Length = 195 Score = 63.7 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 44/191 (23%), Positives = 76/191 (39%), Gaps = 7/191 (3%) Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178 +++ + G E + + LR + + LE ++L++ Sbjct: 4 MQLSSAHGPAECEYALQLTLRKLLQACAAEDLAVKVLEESRTPAG---CRSVLLRCERET 60 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 L+ G + + SP+ R F ++ + + + + +ASG Sbjct: 61 PALREWLGTIQWIFASPFRPRHPRKNWFVAVQRCEPPRQLAM----DGEIQFQSCKASGK 116 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVNTTDSAV H+P+G+ V+ ERSQH NK A +L KL + + + Sbjct: 117 GGQHVNTTDSAVHALHVPSGIAVKVMSERSQHANKRLARELLAIKLAQHNALSEGQAQRL 176 Query: 299 GESSKTEIGWG 309 + G Sbjct: 177 RNQQHWGVERG 187 >gi|323965216|gb|EGB60674.1| RF-1 domain-containing protein [Escherichia coli M863] gi|327254578|gb|EGE66194.1| putative peptide chain release factor H [Escherichia coli STEC_7v] Length = 204 Score = 63.7 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 6/199 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175 L++ + G E L + A ++ LE G + ++SA + + G Sbjct: 2 ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGD 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 NA+ + G + + SPY + R F I + + + +T R+ Sbjct: 62 NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIHYETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + + Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGIRVKVQSERSQHANKRLARLLIAWKLEQQRQENSAAL 176 Query: 296 ANIGESSKTEIGWGRQIRS 314 + +I G R+ Sbjct: 177 KSQRRMFHHQIERGNPRRT 195 >gi|221133060|ref|XP_002169670.1| PREDICTED: similar to peptide chain release factor, putative, partial [Hydra magnipapillata] Length = 171 Score = 63.7 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 69/166 (41%), Gaps = 8/166 (4%) Query: 14 FD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 FD + V+R L ++ + L +E L + I +++++ + Sbjct: 3 FDNKLNRLVERHIDLRDLLATHD-MKDAKDFAKLSKEYSDLTDIAEAIADLRNKQAEKND 61 Query: 72 LLELALEEDDCSILQETSDNLQRIK-----LEVEYKQFESLLSGEADSNDAYLEVHAGAG 126 L + + + +++ + + + + + L D +A LEV AG G Sbjct: 62 LAAMLSDSSLDTEMKQLAQSDYDLLLEELPNIEQQIKVLLLPKDADDERNAILEVRAGTG 121 Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 G E+ +A +L RMY R+A + ++ E + + D IK A+ I Sbjct: 122 GEEAGLFAAVLFRMYQRYAANKGWRFEIIAMSDTGLGAIKEASASI 167 >gi|328852101|gb|EGG01250.1| hypothetical protein MELLADRAFT_92621 [Melampsora larici-populina 98AG31] Length = 174 Score = 63.7 bits (153), Expect = 5e-08, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 78/183 (42%), Gaps = 29/183 (15%) Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV----YPVVDDSI 219 G++ A L IKG + Y ++ E GVH + + + S HTS +++ V D Sbjct: 9 GLREAPLEIKGEDVYKRMRWEAGVHCVQCVPVMQNTSLVHTSTAAVIVLAFDPGNQDRQE 68 Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 E + D R +T R+ G GGQHVN T+S VR+TH+P + + + Sbjct: 69 EALFEDKDVRTETMRSQGVGGQHVNKTESVVRLTHVPNWNS--------------RVFMI 114 Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339 LRA L +L Q+++ + I V V D R + V+ Sbjct: 115 LRAILSDLRNQQKQVEERGLRLLQL-------I--CVF--QGRVTDHRIGLTLPRLHYVM 163 Query: 340 DGD 342 +GD Sbjct: 164 EGD 166 >gi|227884748|ref|ZP_04002553.1| peptide chain release factor family protein [Escherichia coli 83972] gi|300977367|ref|ZP_07173858.1| putative peptide chain release factor H [Escherichia coli MS 45-1] gi|301045877|ref|ZP_07193064.1| putative peptide chain release factor H [Escherichia coli MS 185-1] gi|331656314|ref|ZP_08357276.1| putative peptide chain release factor H [Escherichia coli TA206] gi|331681653|ref|ZP_08382286.1| putative peptide chain release factor H [Escherichia coli H299] gi|26106678|gb|AAN78863.1|AE016756_46 Peptide chain release factor homolog [Escherichia coli CFT073] gi|222032084|emb|CAP74823.1| Peptide chain release factor homolog [Escherichia coli LF82] gi|227838349|gb|EEJ48815.1| peptide chain release factor family protein [Escherichia coli 83972] gi|300302127|gb|EFJ58512.1| putative peptide chain release factor H [Escherichia coli MS 185-1] gi|300409892|gb|EFJ93430.1| putative peptide chain release factor H [Escherichia coli MS 45-1] gi|307552166|gb|ADN44941.1| peptide chain release factor-like protein [Escherichia coli ABU 83972] gi|312944860|gb|ADR25687.1| peptide chain release factor-like protein [Escherichia coli O83:H1 str. NRG 857C] gi|315295160|gb|EFU54495.1| putative peptide chain release factor H [Escherichia coli MS 153-1] gi|315300862|gb|EFU60084.1| putative peptide chain release factor H [Escherichia coli MS 16-3] gi|323191394|gb|EFZ76656.1| putative peptide chain release factor H [Escherichia coli RN587/1] gi|331054562|gb|EGI26571.1| putative peptide chain release factor H [Escherichia coli TA206] gi|331080855|gb|EGI52020.1| putative peptide chain release factor H [Escherichia coli H299] Length = 204 Score = 63.3 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 6/199 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175 L++ + G E L + A ++ LE G + ++SA + + G Sbjct: 2 ILLQLSSAQGPEECCLAVRKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALISLDGD 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 NA+ + G + + SPY + R F I + + + R +T R+ Sbjct: 62 NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRYETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + + + Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAAL 176 Query: 296 ANIGESSKTEIGWGRQIRS 314 + +I G R+ Sbjct: 177 KSQRRMFHHQIERGNPRRT 195 >gi|323938779|gb|EGB35025.1| RF-1 domain-containing protein [Escherichia coli E1520] Length = 185 Score = 63.3 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%) Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + + G NA+ + G + + SPY + R F I + + + R Sbjct: 37 ISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAVR 91 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +T R+SG GGQHVN TDSAVR TH+ TG+ V+ Q ERSQH NK A ++ +L + + Sbjct: 92 YETLRSSGPGGQHVNKTDSAVRATHLATGISVKVQSERSQHANKRLARLLIAWRLEQQQQ 151 Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314 + + + +I G R+ Sbjct: 152 ENSAALKSQRRMIHHQIERGNPRRT 176 >gi|300934927|ref|ZP_07149981.1| putative peptide chain release factor H [Escherichia coli MS 21-1] gi|300459833|gb|EFK23326.1| putative peptide chain release factor H [Escherichia coli MS 21-1] Length = 204 Score = 63.3 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 6/199 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175 L++ + G E L + A ++ LE G + ++SA + + G Sbjct: 2 ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALISLDGD 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 NA+ + G + + SPY + R F I + + + R +T R+ Sbjct: 62 NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRYETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + + + Sbjct: 117 SGPGGQHVNNTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAAL 176 Query: 296 ANIGESSKTEIGWGRQIRS 314 + +I G R+ Sbjct: 177 KSQRRMFHHQIERGNPRRT 195 >gi|289806047|ref|ZP_06536676.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 41 Score = 63.3 bits (152), Expect = 6e-08, Method: Composition-based stats. Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353 SYVL +KDLRT +E + VLDG LD F++A+L Sbjct: 1 SYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 39 >gi|197287314|ref|YP_002153186.1| peptide chain release factor [Proteus mirabilis HI4320] gi|194684801|emb|CAR46873.1| probable peptide chain release factor [Proteus mirabilis HI4320] Length = 203 Score = 62.9 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 53/194 (27%), Positives = 78/194 (40%), Gaps = 6/194 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 L+ + G E L + E+R+ LE G+KS + +KG Sbjct: 1 MLLQFSSAQGPEECCIAVEKTLNYFLTVTEQRQVDVIILEQEPSRY-GLKSVLVSLKGAE 59 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 A + G + S +R F I EI +++ +T RA+ Sbjct: 60 AKAIAQQWSGTVQWQCTSTLRPKHKRKNWFIGI-----AYFDPPQEIQDTEILFETMRAN 114 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQHVN T SAVR THI TG+ V+ Q +R QH NK A ++ L Q++ Sbjct: 115 GPGGQHVNKTSSAVRATHIATGISVKIQSQRIQHANKKLAKQLIAWHLTHYLSQQQASFN 174 Query: 297 NIGESSKTEIGWGR 310 N + + G Sbjct: 175 NQRHLAHHRVIRGN 188 >gi|325498389|gb|EGC96248.1| prfH [Escherichia fergusonii ECD227] Length = 204 Score = 62.9 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 6/195 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175 L++ + G E L + A ++ LE G + ++SA + + G Sbjct: 2 ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALVSLDGD 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 NA+ + G + + SPY + R F I + + + +T R+ Sbjct: 62 NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIHYETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + + + Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAAL 176 Query: 296 ANIGESSKTEIGWGR 310 + +I G Sbjct: 177 KSQRRMFHHQIERGN 191 >gi|194432592|ref|ZP_03064878.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae 1012] gi|194419153|gb|EDX35236.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae 1012] gi|320178936|gb|EFW53898.1| peptide chain release factor-like protein [Shigella boydii ATCC 9905] gi|332085764|gb|EGI90928.1| putative peptide chain release factor H [Shigella dysenteriae 155-74] gi|332094999|gb|EGJ00038.1| putative peptide chain release factor H [Shigella boydii 5216-82] Length = 204 Score = 62.9 bits (151), Expect = 7e-08, Method: Composition-based stats. Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 6/199 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175 L++ + G E L + A ++ LE G + ++SA + + G Sbjct: 2 ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALISLDGD 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 NA+ + G + + SPY + R F I + + + R +T R+ Sbjct: 62 NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQGQSDAIRYETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + + + Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVL 176 Query: 296 ANIGESSKTEIGWGRQIRS 314 + +I G R+ Sbjct: 177 KSQRRMFHHQIERGNPRRT 195 >gi|17548920|ref|NP_522260.1| peptide chain release factor-like protein [Ralstonia solanacearum GMI1000] gi|17431170|emb|CAD17850.1| putative peptide chain release factor homolog protein [Ralstonia solanacearum GMI1000] Length = 207 Score = 62.9 bits (151), Expect = 8e-08, Method: Composition-based stats. Identities = 56/195 (28%), Positives = 81/195 (41%), Gaps = 6/195 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175 L+ + G E + L R + + E LE DGE G +SA + ++G Sbjct: 2 ILLQFSSAQGPAECELAVLKGLACLQRESALAGVRVEVLEQEDGEHPGTLRSALVSLEGD 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 + +G + SPY R F + + S+ R +T RA Sbjct: 62 AEAAVAQRWEGTIQWTCPSPYRPRHARKNWFFGVARC-----AAPAATLPSEIRFETARA 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN T+SAVR H+ TG+ V+ Q ERSQH NK A +L KL + Sbjct: 117 SGPGGQHVNKTESAVRAIHLATGISVKVQTERSQHANKRLAVLLLAHKLASHDAAASAAQ 176 Query: 296 ANIGESSKTEIGWGR 310 + ++ G Sbjct: 177 RAHRRTLHHQVARGN 191 >gi|68171148|ref|ZP_00544556.1| hypothetical protein EchaDRAFT_0701 [Ehrlichia chaffeensis str. Sapulpa] gi|67999418|gb|EAM86059.1| hypothetical protein EchaDRAFT_0701 [Ehrlichia chaffeensis str. Sapulpa] Length = 39 Score = 62.5 bits (150), Expect = 8e-08, Method: Composition-based stats. Identities = 18/35 (51%), Positives = 25/35 (71%) Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351 + PYQMVKD+RT E + + VLDG+LD F+ + L Sbjct: 1 MHPYQMVKDIRTGHEVGNINSVLDGNLDSFIISAL 35 >gi|323943355|gb|EGB39508.1| RF-1 domain-containing protein [Escherichia coli E482] Length = 185 Score = 62.5 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%) Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + + G NA+ + G + + SPY + R F I + + + R Sbjct: 37 VSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 91 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + Sbjct: 92 YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 151 Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314 + + + +I G R+ Sbjct: 152 ENSAALKSQRRMFHHQIERGNPRRT 176 >gi|300947294|ref|ZP_07161497.1| putative peptide chain release factor H [Escherichia coli MS 116-1] gi|300955685|ref|ZP_07168035.1| putative peptide chain release factor H [Escherichia coli MS 175-1] gi|301643547|ref|ZP_07243589.1| putative peptide chain release factor H [Escherichia coli MS 146-1] gi|260450569|gb|ACX40991.1| peptide chain release factor H [Escherichia coli DH1] gi|300317436|gb|EFJ67220.1| putative peptide chain release factor H [Escherichia coli MS 175-1] gi|300453095|gb|EFK16715.1| putative peptide chain release factor H [Escherichia coli MS 116-1] gi|301078047|gb|EFK92853.1| putative peptide chain release factor H [Escherichia coli MS 146-1] Length = 178 Score = 62.5 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%) Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + + G NA+ + G + + SPY + R F I + + + R Sbjct: 30 VSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 84 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + Sbjct: 85 YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 144 Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314 + + + +I G R+ Sbjct: 145 ENSAALKSQRRMFHHQIERGNPRRT 169 >gi|302780523|ref|XP_002972036.1| hypothetical protein SELMODRAFT_412495 [Selaginella moellendorffii] gi|300160335|gb|EFJ26953.1| hypothetical protein SELMODRAFT_412495 [Selaginella moellendorffii] Length = 402 Score = 62.5 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341 EL++ A+ E + +IG +IR+ P V D R + + S +++G Sbjct: 187 MLYELERSRTAASRSELQQDQIGSSDRLERIRTCNF-PQDRVTDHRVGVTQHSIEQIMEG 245 >gi|153846265|ref|ZP_01993846.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ3810] gi|149744945|gb|EDM56287.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ3810] Length = 116 Score = 62.5 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 33/103 (32%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + V+R + DP + + + + L +E L+ + Q D E+ Sbjct: 9 LETLVERYEEVQHLLGDPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQDDLAAAEEM 68 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 A E+D+ + + +L D ND Sbjct: 69 AKEDDEEMREMAQEEIKDAKEAIERLADELQILLLPKDPNDDR 111 >gi|53714002|ref|YP_099994.1| peptide chain release factor-like protein [Bacteroides fragilis YCH46] gi|253567006|ref|ZP_04844457.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|265764352|ref|ZP_06092920.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|52216867|dbj|BAD49460.1| putative peptide chain release factor [Bacteroides fragilis YCH46] gi|251944130|gb|EES84639.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|263256960|gb|EEZ28306.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|301163677|emb|CBW23231.1| putative peptide chain release factor [Bacteroides fragilis 638R] Length = 206 Score = 62.5 bits (150), Expect = 9e-08, Method: Composition-based stats. Identities = 60/198 (30%), Positives = 88/198 (44%), Gaps = 4/198 (2%) Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK-SATLLI 172 YL++ +G G E ++L R A+KRK + E LE G S + + Sbjct: 1 MEKTYLQITSGRGPVECCRVVALVLEKILREAQKRKLRVEILEKETGPVNRTLLSVVVAL 60 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G +G + SPY + RR F + + + + E D R +T Sbjct: 61 EGAGCDVLADEWEGTVLWIARSPYRIHHRRKNWFVGVQTFLLSESREAT---EDDIRYET 117 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASG GGQHVN T+SAVR HIP+G+ V +RSQ +NK A L KL +++ Sbjct: 118 LRASGPGGQHVNKTESAVRAVHIPSGISVVASDQRSQWQNKKLATERLLVKLTAWNIEQA 177 Query: 293 EEIANIGESSKTEIGWGR 310 A S+ + G Sbjct: 178 MIQAQTNWSNHNSLQRGN 195 >gi|323963546|gb|EGB59104.1| RF-1 domain-containing protein [Escherichia coli H489] Length = 185 Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%) Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + + G NA+ + G + + SPY + R F I + + + R Sbjct: 37 VSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEKEQSDAIR 91 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + Sbjct: 92 YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 151 Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314 + + + +I G R+ Sbjct: 152 ENSAALKSQRRMFHHQIERGNPRRT 176 >gi|332885245|gb|EGK05496.1| peptide chain release factor H [Dysgonomonas mossii DSM 22836] Length = 206 Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 4/198 (2%) Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA-TLLI 172 +N YL++ +G G E ++L + A + K + E LE GE + + + Sbjct: 2 NNKIYLQITSGRGPAECCRAVALVLEKILKQARELKLEAEVLEREQGEINRTLFSAIISL 61 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G + +GV + SPY +R F + S ++ T Sbjct: 62 EGNKIDEIVNEWEGVIQWTAQSPYRIYHKRKNWFVGV---KSFTPSELSDVDMKYITYQT 118 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 R+SGAGGQHVN T++AVR H P+G+ V +RSQH+NK A L KL ++ Sbjct: 119 LRSSGAGGQHVNKTETAVRAIHNPSGLSVIASDQRSQHQNKKLATERLLVKLSAWTEEQM 178 Query: 293 EEIANIGESSKTEIGWGR 310 + A + + G Sbjct: 179 MQEAQKNWDNHNSLERGN 196 >gi|300929514|ref|ZP_07144981.1| putative peptide chain release factor H [Escherichia coli MS 187-1] gi|300462556|gb|EFK26049.1| putative peptide chain release factor H [Escherichia coli MS 187-1] gi|323972417|gb|EGB67624.1| RF-1 domain-containing protein [Escherichia coli TA007] Length = 178 Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%) Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + + G NA+ + G + + SPY + R F I + + + R Sbjct: 30 VSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEKEQSDAIR 84 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + Sbjct: 85 YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 144 Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314 + + + +I G R+ Sbjct: 145 ENSAALKSQRRMFHHQIERGNPRRT 169 >gi|331671827|ref|ZP_08372623.1| putative peptide chain release factor H [Escherichia coli TA280] gi|331070816|gb|EGI42175.1| putative peptide chain release factor H [Escherichia coli TA280] Length = 232 Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 6/200 (3%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATL 170 + L++ + G E L + A ++ LE G + ++SA + Sbjct: 25 REKRMILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALI 84 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 + G +A+ + G + + SPY + R F I + + + R Sbjct: 85 SLDGDSAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRY 139 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + + Sbjct: 140 ETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQE 199 Query: 291 KREEIANIGESSKTEIGWGR 310 + + +I G Sbjct: 200 NSAALKSQRRMFHHQIERGN 219 >gi|209917447|ref|YP_002291531.1| peptide chain release factor-like protein [Escherichia coli SE11] gi|209910706|dbj|BAG75780.1| peptide chain release factor [Escherichia coli SE11] Length = 202 Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 6/198 (3%) Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPN 176 L++ + G E L + A ++ LE G + ++SA + + G N Sbjct: 1 MLQLSSAQGPEECCLAVKKALERLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGDN 60 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 A+ + G + + SPY + R F I + + + R +T R+S Sbjct: 61 AWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRYETLRSS 115 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + + + Sbjct: 116 GPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVLK 175 Query: 297 NIGESSKTEIGWGRQIRS 314 + +I G R+ Sbjct: 176 SQRRMFHHQIERGNPRRT 193 >gi|331675918|ref|ZP_08376635.1| putative peptide chain release factor H [Escherichia coli H591] gi|331076478|gb|EGI47755.1| putative peptide chain release factor H [Escherichia coli H591] Length = 232 Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats. Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 6/204 (2%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATL 170 + L++ + G E L + A ++ LE G + ++SA + Sbjct: 25 REKRMILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALV 84 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 + G NA+ + G + + SPY + R F I + + + R Sbjct: 85 SLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRY 139 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + + Sbjct: 140 ETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQE 199 Query: 291 KREEIANIGESSKTEIGWGRQIRS 314 + + +I G R+ Sbjct: 200 NSAVLKSQRRMFHHQIERGNPRRT 223 >gi|256020250|ref|ZP_05434115.1| peptide chain release factor-like protein [Shigella sp. D9] gi|332281412|ref|ZP_08393825.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella sp. D9] gi|323181570|gb|EFZ66990.1| putative peptide chain release factor H [Escherichia coli 1357] gi|332103764|gb|EGJ07110.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella sp. D9] Length = 204 Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 6/199 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175 L++ + G E L + A ++ LE G + ++SA + + G Sbjct: 2 ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGD 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 NA+ + G + + SPY + R F I + + R +T R+ Sbjct: 62 NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTANEQEQSDAIRYETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + + + Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVL 176 Query: 296 ANIGESSKTEIGWGRQIRS 314 + +I G R+ Sbjct: 177 KSQRRMFHHQIERGNPRRT 195 >gi|168238579|ref|ZP_02663637.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194735122|ref|YP_002113341.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194710624|gb|ACF89845.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288612|gb|EDY27989.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 204 Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 12/201 (5%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD-GEEAGIKSATLLIKGP 175 L++ + G E L T+ A + K LE ++SA + + G Sbjct: 2 ILLQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A + + G + SPY + R + I S + ++ + +T R+ Sbjct: 62 KAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGI-----GRFSADEQMQSDEIHFETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ +L E Q++ E Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWRL---EQQRQNEC 173 Query: 296 ANIGESSK---TEIGWGRQIR 313 A + + +I G +R Sbjct: 174 AALKSERRLFHHQIERGNPLR 194 >gi|157156041|ref|YP_001461424.1| peptide chain release factor-like protein [Escherichia coli E24377A] gi|187732116|ref|YP_001879031.1| peptide chain release factor-like protein [Shigella boydii CDC 3083-94] gi|300817246|ref|ZP_07097464.1| putative peptide chain release factor H [Escherichia coli MS 107-1] gi|300823448|ref|ZP_07103578.1| putative peptide chain release factor H [Escherichia coli MS 119-7] gi|307313497|ref|ZP_07593118.1| peptide chain release factor H [Escherichia coli W] gi|309797856|ref|ZP_07692238.1| putative peptide chain release factor H [Escherichia coli MS 145-7] gi|331666568|ref|ZP_08367442.1| putative peptide chain release factor H [Escherichia coli TA271] gi|157078071|gb|ABV17779.1| putative peptide chain release factor H [Escherichia coli E24377A] gi|187429108|gb|ACD08382.1| peptidyl-tRNA hydrolase domain protein [Shigella boydii CDC 3083-94] gi|300524066|gb|EFK45135.1| putative peptide chain release factor H [Escherichia coli MS 119-7] gi|300530222|gb|EFK51284.1| putative peptide chain release factor H [Escherichia coli MS 107-1] gi|306906665|gb|EFN37176.1| peptide chain release factor H [Escherichia coli W] gi|308118540|gb|EFO55802.1| putative peptide chain release factor H [Escherichia coli MS 145-7] gi|320176701|gb|EFW51738.1| peptide chain release factor-like protein [Shigella dysenteriae CDC 74-1112] gi|320185048|gb|EFW59829.1| peptide chain release factor-like protein [Shigella flexneri CDC 796-83] gi|323379877|gb|ADX52145.1| peptide chain release factor H [Escherichia coli KO11] gi|331065792|gb|EGI37676.1| putative peptide chain release factor H [Escherichia coli TA271] Length = 204 Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 6/199 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175 L++ + G E L + A ++ LE G + ++SA + + G Sbjct: 2 ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGD 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 NA+ + G + + SPY + R F I + + + R +T R+ Sbjct: 62 NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRYETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + + + Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVL 176 Query: 296 ANIGESSKTEIGWGRQIRS 314 + +I G R+ Sbjct: 177 KSQRRMFHHQIERGNPRRT 195 >gi|218703550|ref|YP_002411069.1| peptide chain release factor-like protein [Escherichia coli UMN026] gi|218430647|emb|CAR11515.1| putative peptide chain release factor [Escherichia coli UMN026] Length = 166 Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%) Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + + G NA+ + G + + SPY + R F I + + + R Sbjct: 18 ISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 72 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + Sbjct: 73 YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 132 Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314 + + + +I G R+ Sbjct: 133 ENSAALKSQRRMFHHQIERGNPRRT 157 >gi|293418352|ref|ZP_06660787.1| peptide chain release factor H [Escherichia coli B088] gi|291324880|gb|EFE64295.1| peptide chain release factor H [Escherichia coli B088] gi|323945388|gb|EGB41442.1| RF-1 domain-containing protein [Escherichia coli H120] gi|324115579|gb|EGC09518.1| RF-1 domain-containing protein [Escherichia coli E1167] Length = 204 Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 6/199 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175 L++ + G E L + A ++ LE G + ++SA + + G Sbjct: 2 ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALISLDGD 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 NA+ + G + + SPY + R F I + + + R +T R+ Sbjct: 62 NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRYETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + + + Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVL 176 Query: 296 ANIGESSKTEIGWGRQIRS 314 + +I G R+ Sbjct: 177 KSQRRMFHHQIERGNPRRT 195 >gi|260853488|ref|YP_003227379.1| putative peptide chain release factor RF-1 [Escherichia coli O26:H11 str. 11368] gi|260866434|ref|YP_003232836.1| putative peptide chain release factor RF-1 [Escherichia coli O111:H- str. 11128] gi|257752137|dbj|BAI23639.1| predicted peptide chain release factor RF-1 [Escherichia coli O26:H11 str. 11368] gi|257762790|dbj|BAI34285.1| predicted peptide chain release factor RF-1 [Escherichia coli O111:H- str. 11128] gi|323178470|gb|EFZ64048.1| putative peptide chain release factor H [Escherichia coli 1180] Length = 204 Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 6/199 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE-IHDGEEAGIKSATLLIKGP 175 L++ + G E L + A ++ LE ++SA + + G Sbjct: 2 ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGHYSDTLRSALISLDGD 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 NA+ + G + + SPY + R F I + + + R +T R+ Sbjct: 62 NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRYETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + + + Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVL 176 Query: 296 ANIGESSKTEIGWGRQIRS 314 ++ +I G R+ Sbjct: 177 KSLRRMFHHQIERGNPRRT 195 >gi|157159718|ref|YP_001457036.1| peptide chain release factor-like protein [Escherichia coli HS] gi|191165713|ref|ZP_03027552.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B7A] gi|300921975|ref|ZP_07138121.1| putative peptide chain release factor H [Escherichia coli MS 182-1] gi|301325442|ref|ZP_07218928.1| putative peptide chain release factor H [Escherichia coli MS 78-1] gi|157065398|gb|ABV04653.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli HS] gi|190904220|gb|EDV63930.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B7A] gi|300421645|gb|EFK04956.1| putative peptide chain release factor H [Escherichia coli MS 182-1] gi|300847740|gb|EFK75500.1| putative peptide chain release factor H [Escherichia coli MS 78-1] gi|320201148|gb|EFW75731.1| peptide chain release factor-like protein [Escherichia coli EC4100B] gi|323169568|gb|EFZ55240.1| putative peptide chain release factor H [Shigella sonnei 53G] gi|324019875|gb|EGB89094.1| putative peptide chain release factor H [Escherichia coli MS 117-3] Length = 204 Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 6/199 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175 L++ + G E L + A ++ LE G + ++SA + + G Sbjct: 2 ILLQLSSAQGPEECCLAVKKALERLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGD 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 NA+ + G + + SPY + R F I + + + R +T R+ Sbjct: 62 NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRYETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + + + Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVL 176 Query: 296 ANIGESSKTEIGWGRQIRS 314 + +I G R+ Sbjct: 177 KSQRRMFHHQIERGNPRRT 195 >gi|193063214|ref|ZP_03044305.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E22] gi|194427638|ref|ZP_03060186.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B171] gi|260842481|ref|YP_003220259.1| putative peptide chain release factor RF-1 [Escherichia coli O103:H2 str. 12009] gi|192931122|gb|EDV83725.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E22] gi|194414408|gb|EDX30682.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B171] gi|257757628|dbj|BAI29125.1| predicted peptide chain release factor RF-1 [Escherichia coli O103:H2 str. 12009] Length = 204 Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats. Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 6/199 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175 L++ + G E L + A ++ LE G + ++SA + + G Sbjct: 2 ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALISLDGD 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 NA+ + G + + SPY + R F I + + + R +T R+ Sbjct: 62 NAWALSESWCGAIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRYETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + + + Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVL 176 Query: 296 ANIGESSKTEIGWGRQIRS 314 + +I G R+ Sbjct: 177 KSQRRMFHHQIERGNPRRT 195 >gi|16759310|ref|NP_454927.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16763697|ref|NP_459312.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29142917|ref|NP_806259.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62178886|ref|YP_215303.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161615515|ref|YP_001589480.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167993332|ref|ZP_02574427.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168232270|ref|ZP_02657328.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168465389|ref|ZP_02699271.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168819094|ref|ZP_02831094.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194443695|ref|YP_002039557.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194472201|ref|ZP_03078185.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|198241865|ref|YP_002214270.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200389746|ref|ZP_03216357.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|207855800|ref|YP_002242451.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213025683|ref|ZP_03340130.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213161389|ref|ZP_03347099.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213416713|ref|ZP_03349857.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213425142|ref|ZP_03357892.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213649630|ref|ZP_03379683.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213852433|ref|ZP_03381965.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224582156|ref|YP_002635954.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|289826861|ref|ZP_06545771.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25513287|pir||AI0542 probable peptide chain release factor prfH [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16418816|gb|AAL19271.1| putative peptide chain release factor [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16501601|emb|CAD08785.1| putative peptide chain release factor [Salmonella enterica subsp. enterica serovar Typhi] gi|29138549|gb|AAO70119.1| putative peptide chain release factor [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62126519|gb|AAX64222.1| putative peptide chain release factor [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161364879|gb|ABX68647.1| hypothetical protein SPAB_03287 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402358|gb|ACF62580.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194458565|gb|EDX47404.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195631774|gb|EDX50294.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197936381|gb|ACH73714.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602191|gb|EDZ00737.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205328589|gb|EDZ15353.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205333479|gb|EDZ20243.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205344152|gb|EDZ30916.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|206707603|emb|CAR31885.1| putative peptide chain release factor [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224466683|gb|ACN44513.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261245540|emb|CBG23335.1| putative peptide chain release factor [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992008|gb|ACY86893.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301156930|emb|CBW16412.1| putative peptide chain release factor [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911285|dbj|BAJ35259.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320084570|emb|CBY94362.1| Peptide chain release factor 1 RF-1 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321224975|gb|EFX50036.1| Peptide chain release protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322713338|gb|EFZ04909.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323128632|gb|ADX16062.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326622014|gb|EGE28359.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332987265|gb|AEF06248.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 204 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 12/201 (5%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD-GEEAGIKSATLLIKGP 175 L++ + G E L T+ A + K LE ++SA + + G Sbjct: 2 ILLQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A + + G + SPY + R + I S + I + R +T R+ Sbjct: 62 KAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGI-----GRFSADEHIQSDEIRFETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ +L E Q++ E Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWRL---EQQRQNEC 173 Query: 296 ANIGESSK---TEIGWGRQIR 313 A + + +I G +R Sbjct: 174 AALKSERRLFHHQIERGNPLR 194 >gi|167553099|ref|ZP_02346849.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205322360|gb|EDZ10199.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 204 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 12/201 (5%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD-GEEAGIKSATLLIKGP 175 L++ + G E L T+ A + K LE ++SA + + G Sbjct: 2 ILLQLSSAQGPDECCLAVKKTLDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A + + G + SPY + R + I S + I + R +T R+ Sbjct: 62 KAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGI-----GRFSADEHIQSDEIRFETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ +L E Q++ E Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWRL---EQQRQNEC 173 Query: 296 ANIGESSK---TEIGWGRQIR 313 A + + +I G +R Sbjct: 174 AALKSERRLFHHQIERGNPLR 194 >gi|60682199|ref|YP_212343.1| peptide chain release factor-like protein [Bacteroides fragilis NCTC 9343] gi|60493633|emb|CAH08422.1| putative peptide chain release factor [Bacteroides fragilis NCTC 9343] Length = 206 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 60/198 (30%), Positives = 88/198 (44%), Gaps = 4/198 (2%) Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK-SATLLI 172 YL++ +G G E ++L R A+KRK + E LE G S + + Sbjct: 1 MEKTYLQITSGRGPVECCRVVALVLEKILREAQKRKLRVEILEKETGPVNRTLLSVVVAL 60 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G +G + SPY + RR F + + + + E D R +T Sbjct: 61 EGAGCDVLADEWEGTVLWIARSPYRIHHRRKNWFVGVQTFLLSESCEAT---EDDIRYET 117 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASG GGQHVN T+SAVR HIP+G+ V +RSQ +NK A L KL +++ Sbjct: 118 LRASGPGGQHVNKTESAVRAVHIPSGISVVASDQRSQWQNKKLATERLLVKLTAWNIEQA 177 Query: 293 EEIANIGESSKTEIGWGR 310 A S+ + G Sbjct: 178 MIQAQTNWSNHNSLQRGN 195 >gi|56414557|ref|YP_151632.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197363487|ref|YP_002143124.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56128814|gb|AAV78320.1| putative peptide chain release factor [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094964|emb|CAR60501.1| putative peptide chain release factor [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 204 Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 12/201 (5%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD-GEEAGIKSATLLIKGP 175 L++ + G E L T+ A + K LE ++SA + + G Sbjct: 2 ILLQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A + + G + SPY + R + I S + I + R +T R+ Sbjct: 62 KAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGI-----GRFSADEHIQSDEIRFETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN +DSAVR TH+ +G+ V+ Q ERSQH NK A ++ +L E Q++ E Sbjct: 117 SGPGGQHVNKSDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWRL---EQQRQNEC 173 Query: 296 ANIGESSK---TEIGWGRQIR 313 A + + +I G +R Sbjct: 174 AALKSERRLFHHQIERGNPLR 194 >gi|197248567|ref|YP_002145297.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|204927397|ref|ZP_03218599.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|197212270|gb|ACH49667.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|204324062|gb|EDZ09257.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 204 Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 12/201 (5%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD-GEEAGIKSATLLIKGP 175 L++ + G E L T+ A + K LE ++SA + + G Sbjct: 2 ILLQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A + + G + SPY + R + I S + ++ + R +T R+ Sbjct: 62 KAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGI-----GRFSADEQMQSDEIRFETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ +L E Q++ E Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWRL---EQQRQNEC 173 Query: 296 ANIGESSK---TEIGWGRQIR 313 A + + +I G +R Sbjct: 174 AALKSERRLFHHQIERGNPLR 194 >gi|238913295|ref|ZP_04657132.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 204 Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 12/201 (5%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD-GEEAGIKSATLLIKGP 175 L++ + G E L T+ A + K LE ++SA + + G Sbjct: 2 ILLQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A + + G + SPY + R + I S + I + R +T R+ Sbjct: 62 KAMAFSERWCGTLLWICTSPYRPHHGRKNWYIGI-----GRFSADEHIQSDEIRFETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ +L E Q++ E Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWRL---EQQRQNEC 173 Query: 296 ANIGESSK---TEIGWGRQIR 313 A + + +I G +R Sbjct: 174 AALKSERRLFHHQIERGNPLR 194 >gi|322614608|gb|EFY11537.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620127|gb|EFY16999.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623421|gb|EFY20260.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629281|gb|EFY26060.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632001|gb|EFY28755.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637261|gb|EFY33963.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642458|gb|EFY39060.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646289|gb|EFY42803.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322652443|gb|EFY48797.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653395|gb|EFY49728.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660457|gb|EFY56693.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664609|gb|EFY60802.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669338|gb|EFY65488.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670884|gb|EFY67017.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322678877|gb|EFY74932.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681906|gb|EFY77931.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322688032|gb|EFY83998.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194387|gb|EFZ79582.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197802|gb|EFZ82934.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203402|gb|EFZ88427.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206853|gb|EFZ91806.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210378|gb|EFZ95270.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323214620|gb|EFZ99371.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323223176|gb|EGA07519.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224853|gb|EGA09116.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230057|gb|EGA14177.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233795|gb|EGA17884.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238511|gb|EGA22569.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323244199|gb|EGA28208.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246359|gb|EGA30342.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251985|gb|EGA35848.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257982|gb|EGA41661.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259921|gb|EGA43552.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265065|gb|EGA48564.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272628|gb|EGA56035.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 204 Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 12/201 (5%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD-GEEAGIKSATLLIKGP 175 L++ + G E L + A + K LE ++SA + + G Sbjct: 2 ILLQLSSAQGPDECCLAVKKALDCLAKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A + + G + SPY + R + I S + ++ + R +T R+ Sbjct: 62 KAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGI-----GRFSADEQMQSDEIRFETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ +L E Q++ E Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWRL---EQQRQNEC 173 Query: 296 ANIGESSK---TEIGWGRQIR 313 A + + +I G +R Sbjct: 174 AALKSERRLFHHQIERGNPLR 194 >gi|213610056|ref|ZP_03369882.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 204 Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 58/198 (29%), Positives = 89/198 (44%), Gaps = 12/198 (6%) Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD-GEEAGIKSATLLIKGPNAY 178 ++ + G E L T+ A + K LE ++SA + + G A Sbjct: 5 QLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGEKAM 64 Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238 + + G + SPY + R + I S + I + R +T R+SG Sbjct: 65 AFSERWCGTLLWICTSPYRPHHGRKNWYVGI-----GRFSADEHIQSDEIRFETLRSSGP 119 Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298 GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ +L E Q++ E A + Sbjct: 120 GGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWRL---EQQRQNECAAL 176 Query: 299 GESSK---TEIGWGRQIR 313 + +I G +R Sbjct: 177 KSERRLFHHQIERGNPLR 194 >gi|218297204|ref|ZP_03497866.1| PCRF domain protein [Thermus aquaticus Y51MC23] gi|218242481|gb|EED09020.1| PCRF domain protein [Thermus aquaticus Y51MC23] Length = 148 Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 52/144 (36%), Positives = 77/144 (53%), Gaps = 4/144 (2%) Query: 46 MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105 +E L + + ++ L + L E E+ + L ++E E Sbjct: 2 SQEAARLRRTVETFRSLEGDLEGLMELWEELPAEEREA----LKPELLEAAKKLEVLYHE 57 Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165 +LL+ +A L + GAGGTE+ DWA MLLRMYTR+AE++ F+ E +++ G EAG+ Sbjct: 58 TLLNFPHAEKNAILTIQPGAGGTEACDWAEMLLRMYTRFAERQGFEVEVVDLRPGAEAGV 117 Query: 166 KSATLLIKGPNAYGWLKGEQGVHR 189 A +L+KG NAYG L E GVHR Sbjct: 118 DYAQILVKGENAYGLLSAEAGVHR 141 >gi|89107109|ref|AP_000889.1| predicted peptide chain release factor [Escherichia coli str. K-12 substr. W3110] gi|256024120|ref|ZP_05437985.1| peptide chain release factor-like protein [Escherichia sp. 4_1_40B] gi|307136901|ref|ZP_07496257.1| peptide chain release factor-like protein [Escherichia coli H736] gi|331640765|ref|ZP_08341900.1| putative peptide chain release factor H [Escherichia coli H736] gi|115311624|sp|P28369|RFH_ECOLI RecName: Full=Putative peptide chain release factor homolog; Short=RF-H gi|1552804|gb|AAB08656.1| PrfH [Escherichia coli] gi|85674391|dbj|BAA77905.2| predicted peptide chain release factor [Escherichia coli str. K12 substr. W3110] gi|315134921|dbj|BAJ42080.1| peptide chain release factor 2 [Escherichia coli DH1] gi|315616801|gb|EFU97418.1| putative peptide chain release factor H [Escherichia coli 3431] gi|331037563|gb|EGI09783.1| putative peptide chain release factor H [Escherichia coli H736] Length = 166 Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%) Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + + G NA+ + G + + SPY + R F I + + + R Sbjct: 18 VSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 72 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + Sbjct: 73 YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 132 Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314 + + + +I G R+ Sbjct: 133 ENSAALKSQRRMFHHQIERGNPRRT 157 >gi|215485384|ref|YP_002327815.1| peptide chain release factor-like protein [Escherichia coli O127:H6 str. E2348/69] gi|215263456|emb|CAS07777.1| predicted peptide chain release factor [Escherichia coli O127:H6 str. E2348/69] Length = 193 Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 6/195 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175 L++ + G E L + A ++ LE G + ++SA + + G Sbjct: 2 ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGD 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 NA+ + G + + SPY + R F I + + + R +T R+ Sbjct: 62 NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRYETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + + + Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAAL 176 Query: 296 ANIGESSKTEIGWGR 310 + +I G Sbjct: 177 KSQRRMFHHQIERGN 191 >gi|194438235|ref|ZP_03070327.1| putative peptide chain release factor H [Escherichia coli 101-1] gi|253774739|ref|YP_003037570.1| peptide chain release factor-like protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160350|ref|YP_003043458.1| peptide chain release factor-like protein [Escherichia coli B str. REL606] gi|297520538|ref|ZP_06938924.1| peptide chain release factor-like protein [Escherichia coli OP50] gi|312970362|ref|ZP_07784543.1| putative peptide chain release factor H [Escherichia coli 1827-70] gi|194422899|gb|EDX38894.1| putative peptide chain release factor H [Escherichia coli 101-1] gi|242376066|emb|CAQ30751.1| prfH [Escherichia coli BL21(DE3)] gi|253325783|gb|ACT30385.1| peptide chain release factor H [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972251|gb|ACT37922.1| peptide chain release factor 2 [Escherichia coli B str. REL606] gi|253976460|gb|ACT42130.1| peptide chain release factor 2 [Escherichia coli BL21(DE3)] gi|310337011|gb|EFQ02149.1| putative peptide chain release factor H [Escherichia coli 1827-70] gi|332341589|gb|AEE54923.1| peptide chain release factor-like protein PrfH [Escherichia coli UMNK88] Length = 166 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%) Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + + G NA+ + G + + SPY + R F I + + + R Sbjct: 18 VSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEKEQSDAIR 72 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + Sbjct: 73 YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 132 Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314 + + + +I G R+ Sbjct: 133 ENSAALKSQRRMFHHQIERGNPRRT 157 >gi|331651168|ref|ZP_08352193.1| putative peptide chain release factor H [Escherichia coli M718] gi|331050909|gb|EGI22961.1| putative peptide chain release factor H [Escherichia coli M718] Length = 166 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%) Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + + G NA+ + G + + SPY + R F I + + + R Sbjct: 18 ISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 72 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + Sbjct: 73 YETQRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 132 Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314 + + + +I G R+ Sbjct: 133 ENSAALKSQRRMFHHQIERGNPRRT 157 >gi|161486311|ref|NP_752319.2| peptide chain release factor-like protein [Escherichia coli CFT073] gi|162138491|ref|YP_539310.2| peptide chain release factor-like protein [Escherichia coli UTI89] gi|218557192|ref|YP_002390105.1| peptide chain release factor-like protein [Escherichia coli S88] gi|218688128|ref|YP_002396340.1| peptide chain release factor-like protein [Escherichia coli ED1a] gi|218363961|emb|CAR01626.1| putative peptide chain release factor [Escherichia coli S88] gi|218425692|emb|CAR06484.1| putative peptide chain release factor [Escherichia coli ED1a] Length = 166 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%) Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + + G NA+ + G + + SPY + R F I + + + R Sbjct: 18 ISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 72 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + Sbjct: 73 YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 132 Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314 + + + +I G R+ Sbjct: 133 ENSAALKSQRRMFHHQIERGNPRRT 157 >gi|78066331|ref|YP_369100.1| peptide chain release factor-like protein [Burkholderia sp. 383] gi|77967076|gb|ABB08456.1| Class I peptide chain release factor [Burkholderia sp. 383] Length = 204 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 55/203 (27%), Positives = 85/203 (41%), Gaps = 8/203 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175 +++ + G E Q A LR A+ ++ L+ GE G +SA L + G Sbjct: 1 MLMQISSAHGPLECQLAAANALRRLQAEADAQRVVVTVLDAEPGERPGTLRSALLDLDGA 60 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A G + + SPY R F + + + + D R + RA Sbjct: 61 GAQALADRWTGTLQWICASPYRLRHPRKNWFIGVTRC-----ADAQPLPDGDVRFEAMRA 115 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 G GGQHVN T SA+R TH+ TG+ V+ + ERSQH NK A +L+ +L + + + Sbjct: 116 RGPGGQHVNKTSSAIRATHVATGLSVRVESERSQHANKRLALQLLQVRLQQEADRHASDA 175 Query: 296 ANIGESSKTEIGWGRQIRSYVLQ 318 + G +R V Sbjct: 176 RRQRRMQHFALERGNPVR--VFH 196 >gi|162138281|ref|YP_668200.2| peptide chain release factor-like protein [Escherichia coli 536] Length = 166 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%) Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + + G NA+ + G + + SPY + R F I + + + R Sbjct: 18 ISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 72 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + Sbjct: 73 YETLRSSGPGGQHVNKTDSAVRATHLSSGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 132 Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314 + + + +I G R+ Sbjct: 133 ENSAALKSQRRMFHHQIERGNPRRT 157 >gi|15799941|ref|NP_285953.1| peptide chain release factor-like protein [Escherichia coli O157:H7 EDL933] gi|15829517|ref|NP_308290.1| peptide chain release factor-like protein [Escherichia coli O157:H7 str. Sakai] gi|82775830|ref|YP_402177.1| peptide chain release factor-like protein [Shigella dysenteriae Sd197] gi|168750219|ref|ZP_02775241.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4113] gi|168757264|ref|ZP_02782271.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4401] gi|168763477|ref|ZP_02788484.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4501] gi|168770034|ref|ZP_02795041.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4486] gi|168776124|ref|ZP_02801131.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4196] gi|168782997|ref|ZP_02808004.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4076] gi|168789709|ref|ZP_02814716.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC869] gi|168800326|ref|ZP_02825333.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC508] gi|195938639|ref|ZP_03084021.1| peptide chain release factor-like protein [Escherichia coli O157:H7 str. EC4024] gi|208806453|ref|ZP_03248790.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4206] gi|208812358|ref|ZP_03253687.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4045] gi|208821267|ref|ZP_03261587.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4042] gi|209398288|ref|YP_002268863.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4115] gi|217325768|ref|ZP_03441852.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. TW14588] gi|254791396|ref|YP_003076233.1| peptide chain release factor-like protein [Escherichia coli O157:H7 str. TW14359] gi|261223709|ref|ZP_05937990.1| peptide chain release factor-like protein [Escherichia coli O157:H7 str. FRIK2000] gi|261255882|ref|ZP_05948415.1| peptide chain release factor-like protein [Escherichia coli O157:H7 str. FRIK966] gi|291281080|ref|YP_003497898.1| putative peptide chain release factor [Escherichia coli O55:H7 str. CB9615] gi|309786024|ref|ZP_07680653.1| putative peptide chain release factor H [Shigella dysenteriae 1617] gi|12513007|gb|AAG54561.1|AE005201_14 probable peptide chain release factor [Escherichia coli O157:H7 str. EDL933] gi|13359720|dbj|BAB33686.1| probable peptide chain release factor [Escherichia coli O157:H7 str. Sakai] gi|81239978|gb|ABB60688.1| probable peptide chain release factor [Shigella dysenteriae Sd197] gi|187768441|gb|EDU32285.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4196] gi|188015585|gb|EDU53707.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4113] gi|188999642|gb|EDU68628.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4076] gi|189355734|gb|EDU74153.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4401] gi|189361064|gb|EDU79483.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4486] gi|189366361|gb|EDU84777.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4501] gi|189370775|gb|EDU89191.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC869] gi|189377360|gb|EDU95776.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC508] gi|208726254|gb|EDZ75855.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4206] gi|208733635|gb|EDZ82322.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4045] gi|208741390|gb|EDZ89072.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4042] gi|209159688|gb|ACI37121.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. EC4115] gi|209745314|gb|ACI70964.1| probable peptide chain release factor [Escherichia coli] gi|209745316|gb|ACI70965.1| probable peptide chain release factor [Escherichia coli] gi|209745318|gb|ACI70966.1| probable peptide chain release factor [Escherichia coli] gi|209745320|gb|ACI70967.1| probable peptide chain release factor [Escherichia coli] gi|209745322|gb|ACI70968.1| probable peptide chain release factor [Escherichia coli] gi|217321989|gb|EEC30413.1| putative peptide chain release factor H [Escherichia coli O157:H7 str. TW14588] gi|254590796|gb|ACT70157.1| peptide chain release factor-like protein [Escherichia coli O157:H7 str. TW14359] gi|290760953|gb|ADD54914.1| Probable peptide chain release factor [Escherichia coli O55:H7 str. CB9615] gi|308926135|gb|EFP71613.1| putative peptide chain release factor H [Shigella dysenteriae 1617] gi|320190210|gb|EFW64860.1| peptide chain release factor-like protein [Escherichia coli O157:H7 str. EC1212] gi|320638171|gb|EFX07920.1| peptide chain release factor-like protein [Escherichia coli O157:H7 str. G5101] gi|320643253|gb|EFX12452.1| peptide chain release factor-like protein [Escherichia coli O157:H- str. 493-89] gi|320648900|gb|EFX17518.1| peptide chain release factor-like protein [Escherichia coli O157:H- str. H 2687] gi|320660248|gb|EFX27758.1| peptide chain release factor-like protein [Escherichia coli O55:H7 str. USDA 5905] gi|320665014|gb|EFX32124.1| peptide chain release factor-like protein [Escherichia coli O157:H7 str. LSU-61] gi|326338757|gb|EGD62576.1| peptide chain release factor-like protein [Escherichia coli O157:H7 str. 1044] gi|326342456|gb|EGD66236.1| peptide chain release factor-like protein [Escherichia coli O157:H7 str. 1125] Length = 166 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%) Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + + G NA+ + G + + +SPY + R F I + + + R Sbjct: 18 ISLDGDNAWALSESWCGTIQWICLSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 72 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +T R SG GGQHVN TDSAVR TH+ TG+ V+ Q ERSQH NK A ++ KL + + Sbjct: 73 YETLRPSGPGGQHVNKTDSAVRATHLATGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 132 Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314 + + + +I G R+ Sbjct: 133 ENSAVLKSQRRMFHHQIERGNPRRT 157 >gi|115634718|ref|XP_787728.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115976393|ref|XP_001185397.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 90 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 6/83 (7%) Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317 + QQERSQHKN++ A ML+ +Y L ++ ++ +++G G +IR+Y Sbjct: 11 AESQQERSQHKNRSIAMTMLQPHIYNRILA--DQTSSERSMRSSQVGTGGRSEKIRTYNY 68 Query: 318 QPYQMVKDLRTNIEKTSPSDVLD 340 Q + D R + +D Sbjct: 69 Q-QDRITDHRRGLTVHGVPSAID 90 >gi|145594573|ref|YP_001158870.1| class I peptide chain release factor [Salinispora tropica CNB-440] gi|145303910|gb|ABP54492.1| Class I peptide chain release factor [Salinispora tropica CNB-440] Length = 202 Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 3/195 (1%) Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKGPNAYG 179 + AG G E LL A + L+ G+ G +S + + G Sbjct: 7 LSAGRGPQECAWALARLLSRLEADAVRNDVDVVRLDSVVGDRPGTYRSVLVRLTGTGVEA 66 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 + G SPY + R + + D +E+D + R G G Sbjct: 67 FAARWTGTLCWQAPSPYRTGHGRKNWYVAAR--QCEVDVPVTPFTEADVEVLAVRTGGPG 124 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQH N +AVR TH PTG VV ER N++ A +LR ++ + R + I Sbjct: 125 GQHRNKASTAVRATHRPTGTVVVVDTERQLSLNRSIALRLLRQRITAGDEAARRALVAIR 184 Query: 300 ESSKTEIGWGRQIRS 314 + E+ G R+ Sbjct: 185 RRAHDEVVRGGPTRT 199 >gi|320654680|gb|EFX22681.1| peptide chain release factor-like protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 166 Score = 61.0 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 5/145 (3%) Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + + G NA+ + G + + +SPY + R F I + + + R Sbjct: 18 ISLDGDNAWALSESWCGTIQWICLSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 72 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +T R SG GGQHVN TD AVR TH+ TG+ V+ Q ERSQH NK A ++ KL + + Sbjct: 73 YETLRPSGPGGQHVNKTDLAVRATHLATGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 132 Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314 + + + +I G R+ Sbjct: 133 ENSAVLKSQRRMFHHQIERGNPRRT 157 >gi|224538378|ref|ZP_03678917.1| hypothetical protein BACCELL_03269 [Bacteroides cellulosilyticus DSM 14838] gi|224520007|gb|EEF89112.1| hypothetical protein BACCELL_03269 [Bacteroides cellulosilyticus DSM 14838] Length = 205 Score = 61.0 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 4/198 (2%) Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK-SATLLI 172 Y+++ +G G E ++L + A + KTE +E G SA + + Sbjct: 1 MEKVYMQITSGRGPAECCRVVALVLEKILKQAVAKGVKTEIVERETGPLNRTLLSAVISL 60 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G + + ++ +G + + SPY +R F + + S E +E++ R +T Sbjct: 61 QGGDYHALIEDWEGSVQWIAQSPYRIYHKRKNWFVGVQTF---TLSESQEATEAEIRYET 117 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASG GGQHVN T+SAVR HIPTG+ V +RSQ +NK A L KL +++ Sbjct: 118 LRASGPGGQHVNKTESAVRAVHIPTGMSVVASDQRSQWQNKKLATERLLLKLASWSIEQA 177 Query: 293 EEIANIGESSKTEIGWGR 310 A S+ + G Sbjct: 178 MIQAQANWSNHNCLQRGN 195 >gi|255009670|ref|ZP_05281796.1| peptide chain release factor-like protein [Bacteroides fragilis 3_1_12] gi|313147455|ref|ZP_07809648.1| class I peptide chain release factor [Bacteroides fragilis 3_1_12] gi|313136222|gb|EFR53582.1| class I peptide chain release factor [Bacteroides fragilis 3_1_12] Length = 207 Score = 61.0 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 4/198 (2%) Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK-SATLLI 172 YL++ +G G E ++L + A+ RK K E +E G SA + + Sbjct: 2 MEKTYLQITSGRGPVECCRVVALVLERILKQAQTRKLKVEIVEKEAGPANRTLLSAVIAL 61 Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232 +G ++ +G + SPY + RR F + + + + E++ R +T Sbjct: 62 EGAGCDTLVEEWEGTVLWIARSPYRIHHRRKNWFVGVQTFLLSESREAT---ENEIRYET 118 Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 RASG GGQHVN T+SAVR HIP+G+ V +RSQ +NK A L KL +++ Sbjct: 119 LRASGPGGQHVNKTESAVRAVHIPSGISVVASDQRSQWQNKKLATERLLVKLTAWNVEQA 178 Query: 293 EEIANIGESSKTEIGWGR 310 A S+ + G Sbjct: 179 MIQAQANWSNHNSLQRGN 196 >gi|218698820|ref|YP_002406449.1| peptide chain release factor-like protein [Escherichia coli IAI39] gi|218368806|emb|CAR16554.1| putative peptide chain release factor [Escherichia coli IAI39] Length = 166 Score = 61.0 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%) Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + + G NA+ + G + + SPY + R F I + + + R Sbjct: 18 ISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 72 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + Sbjct: 73 YETLRSSGPGGQHVNNTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 132 Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314 + + + +I G R+ Sbjct: 133 ENSAALKSQRRMFHHQIERGNPRRT 157 >gi|332829815|gb|EGK02457.1| peptide chain release factor H [Dysgonomonas gadei ATCC BAA-286] Length = 207 Score = 61.0 bits (146), Expect = 3e-07, Method: Composition-based stats. Identities = 53/200 (26%), Positives = 86/200 (43%), Gaps = 4/200 (2%) Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA-TL 170 + YL++ +G G E + + A+K E +E GE + + Sbjct: 1 MRNCKIYLQITSGRGPAECGRVVALTVEKILTQAKKIGLDVEVVEREPGEINRTLFSAVI 60 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I+G A ++ +G + + SPY +R F + + + E + Sbjct: 61 SIEGLKADEIVREWEGTIQWIAQSPYRIYHKRKNWFVGV---RSFTIPDKHNVDEREISY 117 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 T RASG GGQHVN T+SAVR THI +G+ V +RSQ +NK A L KL ++ Sbjct: 118 QTLRASGPGGQHVNKTESAVRATHISSGLSVTASDQRSQLQNKKLAVERLLIKLAAWNME 177 Query: 291 KREEIANIGESSKTEIGWGR 310 + + A ++ + G Sbjct: 178 QNMQKAQENWNNHNTLQRGN 197 >gi|168240054|ref|ZP_02664986.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194449085|ref|YP_002044299.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197263075|ref|ZP_03163149.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|194407389|gb|ACF67608.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197241330|gb|EDY23950.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205339954|gb|EDZ26718.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 204 Score = 60.6 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 12/201 (5%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD-GEEAGIKSATLLIKGP 175 L++ + G E L T+ A + K LE ++SA + + G Sbjct: 2 ILLQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A + + G + SPY + R + I S + I + R +T R+ Sbjct: 62 KAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGI-----GRFSADEHIQSDEIRFETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ +L E Q++ E Sbjct: 117 SGPGGQHVNKTDSAVRATHLVSGISVKVQSERSQHANKRLARLLIAWRL---EQQRQNEC 173 Query: 296 ANIGESSK---TEIGWGRQIR 313 A + + +I G +R Sbjct: 174 AALKSERRLFHHQIERGNPLR 194 >gi|29346864|ref|NP_810367.1| peptide chain release factor-like protein [Bacteroides thetaiotaomicron VPI-5482] gi|29338761|gb|AAO76561.1| putative peptide chain release factor [Bacteroides thetaiotaomicron VPI-5482] Length = 206 Score = 60.6 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 60/196 (30%), Positives = 88/196 (44%), Gaps = 4/196 (2%) Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK-SATLLIKG 174 YL++ +G G E ++L R A+ K E +E G SAT+ ++G Sbjct: 4 KVYLQITSGRGPAECCRVVALVLERIVRQAQASGLKMEMIEREVGPVNRTLLSATIALQG 63 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 + +G + + SPY +R F + S E +E D R +T R Sbjct: 64 AASGELADEWEGTVQWIAQSPYRIYHKRKNWFVGVH---SFVLSESQEATERDFRYETLR 120 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 ASG GGQHVN T+SAVR HIP+G+ V +RSQ +NK A L KL +++ Sbjct: 121 ASGPGGQHVNKTESAVRAVHIPSGMSVVASDQRSQWQNKKLATERLLVKLSSWTMEQAMI 180 Query: 295 IANIGESSKTEIGWGR 310 A S+ + G Sbjct: 181 QAQENWSNHNHLQRGN 196 >gi|332213671|ref|XP_003255948.1| PREDICTED: peptide chain release factor 1-like, mitochondrial isoform 4 [Nomascus leucogenys] Length = 235 Score = 60.6 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 68/208 (32%), Positives = 88/208 (42%), Gaps = 37/208 (17%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L I + E + L + LL E+ E + + I + S Sbjct: 63 ELLAVIKLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D ND LEV AG GG G++ A+ Sbjct: 123 ETDENDLILEVTAGVGG------------------------------------GLRHASA 146 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G AY +K E GVHR+ R+ + R HTS ++ + P I + I+ D RI Sbjct: 147 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQ-PTEINLVINPKDLRI 205 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTG 258 DT RASGAGGQHVNTTDSAVRI H+PT Sbjct: 206 DTKRASGAGGQHVNTTDSAVRIVHLPTD 233 >gi|290475750|ref|YP_003468639.1| putative peptide chain release factor [Xenorhabdus bovienii SS-2004] gi|289175072|emb|CBJ81875.1| putative peptide chain release factor (modular protein) [Xenorhabdus bovienii SS-2004] Length = 205 Score = 60.6 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 6/199 (3%) Query: 117 AYLEVHAGAGGTESQDWA-NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 L++ A G E L R+ E + ++S + I+G Sbjct: 2 ILLQISAAQGPDECALAVRKALERLIDEADELGIMVNILEKESGRRSRTLRSVMVAIQGE 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 N + + G + + SP+ R F + +I ES+ R +T RA Sbjct: 62 NEQQFFERWDGTIKWICASPWRKGDGRKNWFIGV-----AQFKPLQQIMESEIRFETLRA 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN T+SA+R HI +G+ V+ Q ERSQH N+ A +L +L + + + ++ Sbjct: 117 SGPGGQHVNKTESAIRAVHIASGISVKVQSERSQHANRRLACLLLEHRLQQQQDMHQAQL 176 Query: 296 ANIGESSKTEIGWGRQIRS 314 +I G +R+ Sbjct: 177 KAERRLFHNQIERGNPVRT 195 >gi|212697039|ref|ZP_03305167.1| hypothetical protein ANHYDRO_01604 [Anaerococcus hydrogenalis DSM 7454] gi|212675814|gb|EEB35421.1| hypothetical protein ANHYDRO_01604 [Anaerococcus hydrogenalis DSM 7454] Length = 115 Score = 60.2 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 41/100 (41%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + L +G D DN + + + +T + W + +A+ +M + + Sbjct: 13 ELDKNLKMIGAHLDPDNLFKEIKNIEKETLKENFWDDSQKAQEIMADLSDKKDDYKTFIN 72 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101 +++ L D L+++ E ++ +N + + + Sbjct: 73 LKEELEDQSDLIDIIEETNEELDSLVDVENSLNMLKKKYH 112 >gi|253572326|ref|ZP_04849729.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251838101|gb|EES66189.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 206 Score = 60.2 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 60/196 (30%), Positives = 88/196 (44%), Gaps = 4/196 (2%) Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK-SATLLIKG 174 YL++ +G G E ++L R A+ K E +E G SAT+ ++G Sbjct: 4 KVYLQITSGRGPAECCRVVALVLERIVRQAQASGLKVEMIEREVGPVNRTLLSATIALQG 63 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 + +G + + SPY +R F + S E +E D R +T R Sbjct: 64 AASGELADEWEGTVQWIAQSPYRIYHKRKNWFVGVH---SFVLSESQEATERDFRYETLR 120 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 ASG GGQHVN T+SAVR HIP+G+ V +RSQ +NK A L KL +++ Sbjct: 121 ASGPGGQHVNKTESAVRAVHIPSGMSVVASDQRSQWQNKKLATERLLVKLSSWTMEQAMI 180 Query: 295 IANIGESSKTEIGWGR 310 A S+ + G Sbjct: 181 QAQENWSNHNHLQRGN 196 >gi|298386489|ref|ZP_06996045.1| peptide chain release factor H [Bacteroides sp. 1_1_14] gi|298260866|gb|EFI03734.1| peptide chain release factor H [Bacteroides sp. 1_1_14] Length = 206 Score = 60.2 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 60/196 (30%), Positives = 88/196 (44%), Gaps = 4/196 (2%) Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK-SATLLIKG 174 YL++ +G G E ++L R A+ K E +E G SAT+ ++G Sbjct: 4 KVYLQITSGRGPAECCRVVALVLERIVRQAQASGLKVEMIEREVGPVNRTLLSATIALQG 63 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 + +G + + SPY +R F + S E +E D R +T R Sbjct: 64 TASGELADEWEGTVQWIAQSPYRIYHKRKNWFVGVH---SFVLSESQEATERDFRYETLR 120 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 ASG GGQHVN T+SAVR HIP+G+ V +RSQ +NK A L KL +++ Sbjct: 121 ASGPGGQHVNKTESAVRAVHIPSGMSVVASDQRSQWQNKKLATERLLVKLSSWTMEQAMI 180 Query: 295 IANIGESSKTEIGWGR 310 A S+ + G Sbjct: 181 QAQENWSNHNHLQRGN 196 >gi|218550059|ref|YP_002383850.1| peptide chain release factor-like protein [Escherichia fergusonii ATCC 35469] gi|218357600|emb|CAQ90239.1| putative peptide chain release factor [Escherichia fergusonii ATCC 35469] Length = 166 Score = 60.2 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 5/141 (3%) Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + + G NA+ + G + + SPY + R F I + + + R Sbjct: 18 VSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 72 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + Sbjct: 73 YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 132 Query: 290 QKREEIANIGESSKTEIGWGR 310 + + + +I G Sbjct: 133 ENSAALKSQRRMFHHQIERGN 153 >gi|326789649|ref|YP_004307470.1| peptide chain release factor H [Clostridium lentocellum DSM 5427] gi|326540413|gb|ADZ82272.1| peptide chain release factor H [Clostridium lentocellum DSM 5427] Length = 195 Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 4/150 (2%) Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 G +QG + SPY +N +R + + + + ++ Sbjct: 40 GKAKGCFTYITCELDEAADLKQGSVLWICESPYRANCKRKNWYIDVSIL----EEVKKVS 95 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283 +E R +T+R+ G GGQHVN ++ VR H+PTG+ V + RSQH NK A N L Sbjct: 96 TEEIIRFETFRSGGKGGQHVNKVETGVRAIHMPTGIAVVSTEARSQHMNKQIAMNRLLDL 155 Query: 284 LYELELQKREEIANIGESSKTEIGWGRQIR 313 L ++ ++ + + + G IR Sbjct: 156 LAQVNEDANQKEKQLAWLEQNRLIRGNPIR 185 >gi|77415494|gb|AAI05974.1| MTRF1L protein [Homo sapiens] Length = 235 Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 68/208 (32%), Positives = 88/208 (42%), Gaps = 37/208 (17%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L I + E + L + LL E+ E + + I + S Sbjct: 63 ELLAVIKLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D ND LEV AG GG G++ A+ Sbjct: 123 ETDENDLILEVTAGVGG------------------------------------GLRHASA 146 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G AY +K E GVHR+ R+ + R HTS ++ + P I + I+ D RI Sbjct: 147 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQ-PTEINLVINPKDLRI 205 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTG 258 DT RASGAGGQHVNTTDSAVRI H+PT Sbjct: 206 DTKRASGAGGQHVNTTDSAVRIVHLPTD 233 >gi|302866524|ref|YP_003835161.1| peptide chain release factor H [Micromonospora aurantiaca ATCC 27029] gi|315502934|ref|YP_004081821.1| peptide chain release factor h [Micromonospora sp. L5] gi|302569383|gb|ADL45585.1| peptide chain release factor H [Micromonospora aurantiaca ATCC 27029] gi|315409553|gb|ADU07670.1| peptide chain release factor H [Micromonospora sp. L5] Length = 201 Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 53/194 (27%), Positives = 76/194 (39%), Gaps = 3/194 (1%) Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKGPNAYG 179 + AG G E LL A +R +TE +E G+ AG +S + I G A Sbjct: 6 LSAGRGPAECAWALARLLSRLEGEAARRGLRTERVETVPGDRAGTYRSVLVRITGAGAEA 65 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 + G G SPY + R + + D + E+D R G G Sbjct: 66 FAAGWTGTLCWQAPSPYRTGHGRKNWYVTART--CRTDVVVTPFHEADVEFVPCRTGGPG 123 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299 GQH N +AVR TH P+G V ER H N+ A +LR ++ + R + Sbjct: 124 GQHRNKASTAVRATHRPSGRTVVVDTERHLHLNRRIAVELLRQRIAADDEAARRAGVDAR 183 Query: 300 ESSKTEIGWGRQIR 313 E+ G +R Sbjct: 184 WRVHDELVRGDPVR 197 >gi|149369402|ref|ZP_01889254.1| putative peptide chain release factor [unidentified eubacterium SCB49] gi|149356829|gb|EDM45384.1| putative peptide chain release factor [unidentified eubacterium SCB49] Length = 238 Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats. Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 4/208 (1%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG-EEAGI 165 +L N +++ AG G E L+ + E + +G E I Sbjct: 1 MLEWTNKMNTQIIQITAGRGPAECCWVVAQTLKFLIKELTATNITYEIISKENGFENRTI 60 Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 +S TL +KG +L G + V S + + +R F + + V+++ ++E+ Sbjct: 61 QSVTLQLKGKQLDTFLANWLGTIQWVGTSTFRKHHKRKNWFIACF---KVEETNKLELVL 117 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 ++ R+SG GGQHVN SA+R TH +G+ V RSQH+N+ A L+ K+ Sbjct: 118 NEVSFQAMRSSGPGGQHVNKVSSAIRATHKKSGLQVVAMDSRSQHQNRKIAIKRLQEKVS 177 Query: 286 ELELQKREEIANIGESSKTEIGWGRQIR 313 + + + EI G +R Sbjct: 178 NFNRNTLQNSVDDQWRNHLEIKRGNPVR 205 >gi|90019981|ref|YP_525808.1| putative peptide chain release factor [Saccharophagus degradans 2-40] gi|89949581|gb|ABD79596.1| Class I peptide chain release factor [Saccharophagus degradans 2-40] Length = 248 Score = 59.8 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 48/174 (27%), Positives = 74/174 (42%), Gaps = 3/174 (1%) Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203 E F H S L I+G A + G H+ S Y +R Sbjct: 65 VVESLAFDKMLRNQHIVMPDAYLSVLLRIEGEQAQLFANEWCGTHKWQGESIYRPKHKRI 124 Query: 204 TSFSSIWVY---PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 F + V+ SI + + ++ ++SGAGGQHVNTT+SAVR TH P+G+ Sbjct: 125 NWFVGVERITPVKPVETSINYQQLQRQLVFESMKSSGAGGQHVNTTNSAVRATHTPSGIT 184 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 V+ +RSQH+NK A + L E + + N ++ G +++ Sbjct: 185 VRVDTDRSQHRNKRLALERIAMLLLSAEKEGANKQVNERWLQHYQVKRGSPVKT 238 >gi|74310877|ref|YP_309296.1| peptide chain release factor-like protein [Shigella sonnei Ss046] gi|82542839|ref|YP_406786.1| peptide chain release factor-like protein [Shigella boydii Sb227] gi|188494291|ref|ZP_03001561.1| putative peptide chain release factor H [Escherichia coli 53638] gi|73854354|gb|AAZ87061.1| probable peptide chain release factor [Shigella sonnei Ss046] gi|81244250|gb|ABB64958.1| probable peptide chain release factor [Shigella boydii Sb227] gi|188489490|gb|EDU64593.1| putative peptide chain release factor H [Escherichia coli 53638] gi|323171088|gb|EFZ56737.1| putative peptide chain release factor H [Escherichia coli LT-68] gi|332098554|gb|EGJ03520.1| putative peptide chain release factor H [Shigella boydii 3594-74] Length = 166 Score = 59.8 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%) Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + + G NA+ + G + + SPY + R F I + + + R Sbjct: 18 VSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 72 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + Sbjct: 73 YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 132 Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314 + + + +I G R+ Sbjct: 133 ENSAVLKSQRRMFHHQIERGNPRRT 157 >gi|218552840|ref|YP_002385753.1| peptide chain release factor-like protein [Escherichia coli IAI1] gi|218359608|emb|CAQ97149.1| putative peptide chain release factor [Escherichia coli IAI1] Length = 166 Score = 59.8 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%) Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + + G NA+ + G + + SPY + R F I + + + R Sbjct: 18 ISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 72 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + Sbjct: 73 YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 132 Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314 + + + +I G R+ Sbjct: 133 ENSAVLKSQRRMFHHQIERGNPRRT 157 >gi|195611870|gb|ACG27765.1| peptide chain release factor 2 [Zea mays] Length = 262 Score = 59.8 bits (143), Expect = 6e-07, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 84/187 (44%), Gaps = 3/187 (1%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 + + A QR+ + +LW N ++ + + +K+++ + + ++ Sbjct: 69 LELEEA-QRIKQ-EEVLQKRNLWDNPAKSHETLSALADAIRVVDHLKDLRFKAEEAKLIS 126 Query: 74 ELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 +L+ + L + + ++ Q LL G D A + V A + G S+ Sbjct: 127 QLSEMDAINGELFKQAYKSSVDASEYLDRYQMYKLLKGPYDKEGACIIVTAVSNGVTSEL 186 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA + MYT WA K+ +K +E I+SAT+ I+ +G L GE+G+H+++ Sbjct: 187 WAEKVFGMYTSWARKQGYKVGLIEKIFSTSGHIQSATMEIESEYMFGTLSGEKGMHQMIY 246 Query: 193 ISPYDSN 199 S +S+ Sbjct: 247 SSIENSD 253 >gi|218693719|ref|YP_002401386.1| peptide chain release factor-like protein [Escherichia coli 55989] gi|218350451|emb|CAU96139.1| putative peptide chain release factor [Escherichia coli 55989] Length = 166 Score = 59.4 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%) Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + + G NA+ + G + + SPY + R F I + + + R Sbjct: 18 ISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 72 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + Sbjct: 73 YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 132 Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314 + + + +I G R+ Sbjct: 133 ENSAVLKSQRRMFHHQIERGNPRRT 157 >gi|323160301|gb|EFZ46254.1| putative peptide chain release factor H [Escherichia coli E128010] Length = 166 Score = 59.4 bits (142), Expect = 7e-07, Method: Composition-based stats. Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%) Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + + G NA+ + G + + SPY + R F I + + + R Sbjct: 18 ISLDGDNAWALSESWCGAIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 72 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + Sbjct: 73 YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 132 Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314 + + + +I G R+ Sbjct: 133 ENSAVLKSQRRMFHHQIERGNPRRT 157 >gi|56203460|emb|CAI18899.1| mitochondrial translational release factor 1-like [Homo sapiens] Length = 235 Score = 59.4 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 68/208 (32%), Positives = 88/208 (42%), Gaps = 37/208 (17%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L I + E + L + LL E+ E + + I + S Sbjct: 63 ELLAVIKLLNEKERELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D ND LEV AG GG G++ A+ Sbjct: 123 ETDENDLILEVTAGVGG------------------------------------GLRHASA 146 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G AY +K E GVHR+ R+ + R HTS ++ + P I + I+ D RI Sbjct: 147 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQ-PTEINLVINPKDLRI 205 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTG 258 DT RASGAGGQHVNTTDSAVRI H+PT Sbjct: 206 DTKRASGAGGQHVNTTDSAVRIVHLPTD 233 >gi|323158080|gb|EFZ44179.1| putative peptide chain release factor H [Escherichia coli EPECa14] Length = 166 Score = 59.4 bits (142), Expect = 8e-07, Method: Composition-based stats. Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 5/145 (3%) Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + + G NA+ + G + + SPY + R F I + + + R Sbjct: 18 ISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 72 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + Sbjct: 73 YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 132 Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314 + + ++ +I G R+ Sbjct: 133 ENSAVLKSLRRMFHHQIERGNPRRT 157 >gi|114609873|ref|XP_001140447.1| PREDICTED: mitochondrial translational release factor 1-like isoform 1 [Pan troglodytes] Length = 235 Score = 59.0 bits (141), Expect = 9e-07, Method: Composition-based stats. Identities = 68/208 (32%), Positives = 88/208 (42%), Gaps = 37/208 (17%) Query: 51 HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L I + E + L + LL E+ E + + I + S Sbjct: 63 ELLAVIRLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170 E D ND LEV AG GG G++ A+ Sbjct: 123 ETDENDLILEVTAGVGG------------------------------------GLRHASA 146 Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 I G AY +K E GVHR+ R+ + R HTS ++ + P I + I+ D RI Sbjct: 147 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQ-PTEINLVINPKDLRI 205 Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTG 258 DT RASGAGGQHVNTTDSAVRI H+PT Sbjct: 206 DTKRASGAGGQHVNTTDSAVRIVHLPTD 233 >gi|319935093|ref|ZP_08009534.1| hypothetical protein HMPREF9488_00365 [Coprobacillus sp. 29_1] gi|319809988|gb|EFW06365.1| hypothetical protein HMPREF9488_00365 [Coprobacillus sp. 29_1] Length = 195 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 46/208 (22%), Positives = 87/208 (41%), Gaps = 13/208 (6%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 +++++G G E + ML + + + + + L + Sbjct: 1 MLIQINSGQGPKECEYACYMLYQELLKEYSSLEVVSRYVS---------DQKCLKSITFS 51 Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 + L +G + + SP+ + +R F I + D + +T+R+S Sbjct: 52 IHEDLSYLEGTVQWICQSPFRPHHKRRNWFVDISIIKEELKIEN----VEDIKFETFRSS 107 Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 G GGQ+VN +A+R HIPTG+ V +RSQ +NK A+ L K+ ++ + I Sbjct: 108 GKGGQNVNKVSTAIRAIHIPTGISVVAMDQRSQLQNKKIAYLRLMEKINQVNSSHHKRID 167 Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVK 324 + + +I G IR Y ++ +K Sbjct: 168 YLNWNKHNQIVRGNPIRVYSGMKFKRIK 195 >gi|168261270|ref|ZP_02683243.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205349709|gb|EDZ36340.1| putative peptide chain release factor H [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 204 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 12/201 (5%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD-GEEAGIKSATLLIKGP 175 L++ + G E L T+ A + K LE ++SA + + G Sbjct: 2 ILLQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A + + G + SPY + R + I S + I + R +T R+ Sbjct: 62 KAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGI-----GRFSADEHIQSDEIRFETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ +L E Q++ E Sbjct: 117 SGPGGQHVNKTDSAVRATHLVSGISVKVQSERSQHANKRLARLLIAWRL---EQQRQNEC 173 Query: 296 ANIGESSK---TEIGWGRQIR 313 A + + +I G +R Sbjct: 174 AVLKSERRLFHHQIERGNPLR 194 >gi|219362723|ref|NP_001136772.1| hypothetical protein LOC100216914 [Zea mays] gi|194697000|gb|ACF82584.1| unknown [Zea mays] Length = 262 Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 84/187 (44%), Gaps = 3/187 (1%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 + + A QR+ + +LW N ++ + + +K+++ + + ++ Sbjct: 69 LELEEA-QRIKQ-EEVLQKRNLWDNPAKSHETLSALADAIRVVDHLKDLRFKAEEAKLIS 126 Query: 74 ELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 +L+ + L + + ++ Q LL G D A + V A + G S+ Sbjct: 127 QLSEMDAINGELFKQAYKSSVDASEYLDRYQMYKLLKGPYDKEGACIIVTAVSNGVTSEL 186 Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192 WA + MYT WA K+ +K +E I+SAT+ I+ +G L GE+G+H+++ Sbjct: 187 WAEKVFGMYTSWARKQGYKVGLIEKIFSTSGHIQSATMEIESEYMFGTLSGEKGMHQMIY 246 Query: 193 ISPYDSN 199 S +S+ Sbjct: 247 SSLENSD 253 >gi|323249067|gb|EGA32987.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] Length = 56 Score = 58.7 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 18/39 (46%), Gaps = 1/39 (2%) Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348 + R+Y P V D R N+ + ++G LD ++ Sbjct: 1 DRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIE 38 >gi|205351639|ref|YP_002225440.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205271420|emb|CAR36228.1| putative peptide chain release factor [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326626670|gb|EGE33013.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 204 Score = 58.7 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 58/201 (28%), Positives = 89/201 (44%), Gaps = 12/201 (5%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD-GEEAGIKSATLLIKGP 175 L++ + G E L T+ A + K LE ++SA + + G Sbjct: 2 ILLQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A + + G + SPY + R + I S + I + R +T R+ Sbjct: 62 KAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGI-----GRFSADEHIQSDEIRFETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ +L E Q++ Sbjct: 117 SGPGGQHVNKTDSAVRATHLVSGISVKVQSERSQHANKRLARLLIAWRL---EQQRQNGC 173 Query: 296 ANIGESSK---TEIGWGRQIR 313 A + + +I G +R Sbjct: 174 AALKSERRLFHHQIERGNPLR 194 >gi|271961827|ref|YP_003336023.1| peptide chain release factor-like protein [Streptosporangium roseum DSM 43021] gi|270505002|gb|ACZ83280.1| peptide chain release factor-like protein [Streptosporangium roseum DSM 43021] Length = 219 Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats. Identities = 46/167 (27%), Positives = 69/167 (41%), Gaps = 3/167 (1%) Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNAYG 179 + AG G E LLR A ++ +T + G+ +S + I G A Sbjct: 7 LSAGRGPQECAWALARLLRRLEADATRQNLETHRAQTVPGDRPDTYRSVLIQISGAGAEA 66 Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239 + G SPY + + R + P D+ +E+D I R G G Sbjct: 67 FAASWTGTLCWQAPSPYRAGTGRKNWYVIAQ--PCQVDTPRTTFAEADVDIVACRTGGPG 124 Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 GQH N +AVR TH P+G+VV ER N+ A +LR ++ + Sbjct: 125 GQHRNKASTAVRATHRPSGIVVVVDTERQFSLNRRIAMRLLRQRIED 171 >gi|195161900|ref|XP_002021796.1| GL26306 [Drosophila persimilis] gi|194103596|gb|EDW25639.1| GL26306 [Drosophila persimilis] Length = 313 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 21/154 (13%), Positives = 45/154 (29%), Gaps = 10/154 (6%) Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 L+ + + F+ + + +T G +H N + Sbjct: 131 LIFGVNAGAGGQEAMLFAQELFEMYTSYFEHMGWEYEEFARETTDIG--GLRHANVMVNG 188 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-GESSKTEIGW 308 H + + + A L+A+L + +L+ E ++ + + Sbjct: 189 ADAFH-WLRFEAGVH----RVQTRELALKRLQARLVQQQLESSEASKQATKKAQQGSLNR 243 Query: 309 GRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDG 341 +IR+Y V D R + L G Sbjct: 244 NEKIRTYNFV-QDRVTDHRIQGGTLHNLDGFLKG 276 Score = 45.6 bits (106), Expect = 0.011, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 64/150 (42%), Gaps = 4/150 (2%) Query: 48 ERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR----IKLEVEYKQ 103 L+ ++ +++ + + ++ E+D+ +N K E Q Sbjct: 58 RLSQLEGVVNALEQRRVLERNITSAKDIEQEKDEDMRKLMEEENEVYADLLSKQEQTMLQ 117 Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163 L+ + V+AGAGG E+ +A L MYT + E ++ E + Sbjct: 118 ELLALADDEVYPALIFGVNAGAGGQEAMLFAQELFEMYTSYFEHMGWEYEEFARETTDIG 177 Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193 G++ A +++ G +A+ WL+ E GVHR+ Sbjct: 178 GLRHANVMVNGADAFHWLRFEAGVHRVQTR 207 >gi|319937084|ref|ZP_08011493.1| hypothetical protein HMPREF9488_02327 [Coprobacillus sp. 29_1] gi|319807862|gb|EFW04447.1| hypothetical protein HMPREF9488_02327 [Coprobacillus sp. 29_1] Length = 197 Score = 56.7 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 41/147 (27%), Positives = 63/147 (42%), Gaps = 4/147 (2%) Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228 L L +G + + SPY + +R F + + +D Sbjct: 46 CLKSAIFYTEKDLSFLEGTVQWICQSPYRPHHKRKNWFIDVSIIKEDIKIDN----TNDI 101 Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 R + +R+SG GGQ+VN +A+R HIPTG+V +RSQ +NK A+ L K+ E Sbjct: 102 RYEVFRSSGKGGQNVNKVSTAIRAIHIPTGIVTVSMDQRSQLQNKKIAYLRLLEKIDETS 161 Query: 289 LQKREEIANIGESSKTEIGWGRQIRSY 315 + I + +I G IR Y Sbjct: 162 SSINKSIHYLNWVKHNQIERGNPIRVY 188 >gi|84999208|ref|XP_954325.1| peptide chain release factor 1, mitochondrial precursor [Theileria annulata] gi|65305323|emb|CAI73648.1| peptide chain release factor 1, mitochondrial precursor, putative [Theileria annulata] Length = 194 Score = 56.7 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 64/155 (41%), Gaps = 11/155 (7%) Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188 ++ R+ + + + + G + E GVH Sbjct: 21 RGAHLGIRTRQILFRYHMLNYIINKCVRLIESTVQGRIVKLMNKSTEGLEDRFLREGGVH 80 Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDS-----------IEIEISESDCRIDTYRASG 237 ++ R+ + + R H+S +++ V P E+E++ SD T RASG Sbjct: 81 QVKRVPITEKSGRMHSSTATVAVLPSDMVKGNDMNNFDKLVEEVELNPSDIEWKTCRASG 140 Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 GGQ+VN +++V + H PTG+ ++C +ER + Sbjct: 141 PGGQNVNKVETSVSLYHKPTGIKIECSEERYRVTE 175 >gi|213419088|ref|ZP_03352154.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 118 Score = 56.7 bits (135), Expect = 5e-06, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 37/110 (33%), Gaps = 1/110 (0%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 + + + QE ++ + + Q L D +A+LEV AG Sbjct: 69 LDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAG 118 >gi|212697119|ref|ZP_03305247.1| hypothetical protein ANHYDRO_01685 [Anaerococcus hydrogenalis DSM 7454] gi|212675894|gb|EEB35501.1| hypothetical protein ANHYDRO_01685 [Anaerococcus hydrogenalis DSM 7454] Length = 87 Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 29/83 (34%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + ++ + L K DP + + + K + RE L + EI+ E Sbjct: 4 NLEHMRENFKELEKKLADPEVLSDTDKFKKVSREYNQLKPIVEKYNEIRAAEDMIEENTE 63 Query: 75 LALEEDDCSILQETSDNLQRIKL 97 L E +D ++ + K Sbjct: 64 LLKEAEDKEMIDLLKAEIDENKK 86 >gi|315305718|ref|ZP_07875316.1| peptide chain release factor 1 [Listeria ivanovii FSL F6-596] gi|313625914|gb|EFR95448.1| peptide chain release factor 1 [Listeria ivanovii FSL F6-596] Length = 81 Score = 56.4 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 26/77 (33%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R LN DP + + + L +E+ + + +E ++ EL Sbjct: 5 LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNAQIEETKEL 64 Query: 76 ALEEDDCSILQETSDNL 92 E+ D + + + Sbjct: 65 LSEKLDDDMREMAKEEF 81 >gi|167590758|ref|ZP_02383146.1| peptide chain release factor-like protein [Burkholderia ubonensis Bu] Length = 177 Score = 56.4 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 75/182 (41%), Gaps = 6/182 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176 L++ + G E Q A L+ A+ + L++ GE G + LL Sbjct: 1 MLLQISSAHGPAECQLAAAKALQRLQAEADACRVALTVLDLQPGERPGTVRSVLLDLDGA 60 Query: 177 AYGWLK-GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 L G + + SPY R F + + + + + + RA Sbjct: 61 DAAALADRWAGTLQWICASPYRLRHPRKNWFVGVTRC-----ADAPPLPDGAVKFEAMRA 115 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 G GGQHVN T SA+R TH+ TG V+ + ERSQH NK A +L A+L E ++ Sbjct: 116 RGPGGQHVNKTSSAIRATHLATGTSVRVESERSQHANKRLALQLLHARLREQADREAGHA 175 Query: 296 AN 297 Sbjct: 176 RE 177 >gi|307265646|ref|ZP_07547199.1| peptide chain release factor 1 [Thermoanaerobacter wiegelii Rt8.B1] gi|306919290|gb|EFN49511.1| peptide chain release factor 1 [Thermoanaerobacter wiegelii Rt8.B1] Length = 90 Score = 56.4 bits (134), Expect = 6e-06, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 32/85 (37%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L+ K DP++ NV E + ++E +++ + +E + L D EL Sbjct: 5 LQAIEDRYVELSQKISDPNIISNVNEWRKYVKEHAAIEDIVLKYREYKKVLEDIEATKEL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE 100 D+ + Q + + Sbjct: 65 LSSNDEELKEMAEEELSQLEEKKKN 89 >gi|323172436|gb|EFZ58073.1| peptide chain release factor 1 domain protein [Escherichia coli LT-68] Length = 145 Score = 56.4 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 9/76 (11%), Positives = 21/76 (27%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN 91 + + + Q+ Sbjct: 69 LDDPEMREMAQDELRE 84 >gi|116053620|ref|YP_793947.1| peptide chain release factor-like protein [Pseudomonas aeruginosa UCBPP-PA14] gi|115588841|gb|ABJ14856.1| putative peptide chain release factor [Pseudomonas aeruginosa UCBPP-PA14] Length = 204 Score = 56.4 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 54/194 (27%), Positives = 82/194 (42%), Gaps = 6/194 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175 L++ A G E A + + E LE GE +S L ++G Sbjct: 2 ILLQLSAAQGPAECCLAVAKAFERLCLEAAQAGVEVEVLEEVAGERPRTWRSLLLGLRGI 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A + G + + SPY + R F + + E + R +T R+ Sbjct: 62 AAEALAEHWCGGIQWICTSPYRARHARKNWFIGAERF-----AAPPASLEGEIRFETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVNTTDSAVR TH+ +G+ V+ Q +RSQH NK A ++ +L + + + Sbjct: 117 SGPGGQHVNTTDSAVRATHLASGISVRVQSQRSQHANKRLAILLIARRLADQASSAADAL 176 Query: 296 ANIGESSKTEIGWG 309 + I G Sbjct: 177 RAERRQAHGRISRG 190 >gi|296392334|ref|ZP_06881809.1| peptide chain release factor-like protein [Pseudomonas aeruginosa PAb1] Length = 204 Score = 56.4 bits (134), Expect = 7e-06, Method: Composition-based stats. Identities = 53/194 (27%), Positives = 83/194 (42%), Gaps = 6/194 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175 L++ A G E A + + E +E GE + +S L ++G Sbjct: 2 ILLQLSAAQGPAECCLAVAKAFERLCLEAAQAGVEVEVIEEVAGERSRTWRSLLLGLRGT 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A + G + + SPY + R F + + E + R +T R+ Sbjct: 62 AAEALAERWCGGIQWICPSPYRARHARKNWFIGAERF-----AAPPASLEGEIRFETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVNTTDSAVR TH+ +G+ V+ Q +RSQH NK A ++ +L + + + Sbjct: 117 SGPGGQHVNTTDSAVRATHLASGISVRVQSQRSQHANKRLAILLIARRLADQASSAADAL 176 Query: 296 ANIGESSKTEIGWG 309 + I G Sbjct: 177 RAERRQAHGRISRG 190 >gi|281356039|ref|ZP_06242532.1| peptide chain release factor H [Victivallis vadensis ATCC BAA-548] gi|281317408|gb|EFB01429.1| peptide chain release factor H [Victivallis vadensis ATCC BAA-548] Length = 204 Score = 56.0 bits (133), Expect = 8e-06, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 86/200 (43%), Gaps = 3/200 (1%) Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173 +LE+ +G G E + L+ T + E + E++ +KS ++ Sbjct: 1 MKRLFLEISSGQGPEECELLVAKLMVRLTSELRREVRFREVALNGNREKSLVKSVLFELE 60 Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233 G A + G + + SP+ + +R ++ I ++ + E+ +D Sbjct: 61 GEGAAVSVAPWLGTIQWIAASPFRPHHKRRNWYAGIRLF---EAEPELAFDPNDVEFSAS 117 Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293 R+SG GGQHVNT+++ ++ H PTG +ERSQ +N+ A L AK+ Sbjct: 118 RSSGPGGQHVNTSNTRIQAFHRPTGQCAVAGEERSQLRNRELALARLAAKVATRGSAGSA 177 Query: 294 EIANIGESSKTEIGWGRQIR 313 + + E+ G+ +R Sbjct: 178 RLGLEAWRAHRELERGKPVR 197 >gi|213026980|ref|ZP_03341427.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 102 Score = 56.0 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 10/76 (13%), Positives = 22/76 (28%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + + L RE L + + Q D + Sbjct: 14 LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 73 Query: 76 ALEEDDCSILQETSDN 91 + + + QE Sbjct: 74 LDDPEMREMAQEELRE 89 >gi|218894572|ref|YP_002443442.1| peptide chain release factor-like protein [Pseudomonas aeruginosa LESB58] gi|218774801|emb|CAW30619.1| probable peptide chain release factor [Pseudomonas aeruginosa LESB58] Length = 204 Score = 56.0 bits (133), Expect = 9e-06, Method: Composition-based stats. Identities = 52/194 (26%), Positives = 81/194 (41%), Gaps = 6/194 (3%) Query: 117 AYLEVHAGAGGTESQD-WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175 L++ A G E A R+ A+ E+ +S L ++G Sbjct: 2 ILLQLSAAQGPAECCLAVAKAFERLCLEAAQAGVEVEVLEEVTGERPRTWRSLLLGLRGI 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A + G + + SPY + R F + + E + R +T R+ Sbjct: 62 AAEALAEHWCGGIQWICTSPYRARHARKNWFIGAERF-----AAPPASLEGEIRFETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVNTTDSAVR TH+ +G+ V+ Q +RSQH NK A ++ +L + + + Sbjct: 117 SGPGGQHVNTTDSAVRATHLASGISVRVQSQRSQHANKRLAILLIARRLADQASSAADAL 176 Query: 296 ANIGESSKTEIGWG 309 + I G Sbjct: 177 RAERRQAHGRISRG 190 >gi|313111591|ref|ZP_07797390.1| putative peptide chain release factor [Pseudomonas aeruginosa 39016] gi|310883892|gb|EFQ42486.1| putative peptide chain release factor [Pseudomonas aeruginosa 39016] Length = 204 Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 53/194 (27%), Positives = 81/194 (41%), Gaps = 6/194 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175 L++ A G E A + + E +E GE +S L ++G Sbjct: 2 ILLQLSAAQGPAECCLAVAKAFERLCLEAAQAGVEVEVIEEVAGERPRTWRSLLLGLRGT 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A + G + + SPY + R F + E + R +T R+ Sbjct: 62 AAEALAERWCGGIQWICPSPYRARHARKNWFIGAE-----RLAAPPASLEGEIRFETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVNTTDSAVR TH+ +G+ V+ Q +RSQH NK A ++ +L + + + Sbjct: 117 SGPGGQHVNTTDSAVRATHLASGISVRVQSQRSQHANKRLAILLIARRLADQASSAADAL 176 Query: 296 ANIGESSKTEIGWG 309 + I G Sbjct: 177 RAERRRAHGRISRG 190 >gi|256751359|ref|ZP_05492238.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus CCSD1] gi|256749741|gb|EEU62766.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus CCSD1] Length = 90 Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 32/85 (37%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L+ K DP++ NV E + ++E +++ + +E + L D EL Sbjct: 5 LQAIEDRYVDLSQKISDPNIISNVAEWRKYVKEHAAIEDIVLKYREYKKVLEDIEATKEL 64 Query: 76 ALEEDDCSILQETSDNLQRIKLEVE 100 D+ + Q + + Sbjct: 65 LSSNDEELKEMAEEELSQLEEKKKN 89 >gi|107104573|ref|ZP_01368491.1| hypothetical protein PaerPA_01005652 [Pseudomonas aeruginosa PACS2] Length = 207 Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 6/194 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175 L++ A G E A + + E +E GE +S L ++G Sbjct: 5 ILLQLSAAQGPAECCLAVAKAFERLCLEAAQAGVEVEVIEEVAGERPRTWRSLLLGLRGT 64 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A + G + + SPY + R F + + E + R +T R+ Sbjct: 65 AAEALAERWCGGIQWICPSPYRARHARKNWFIGAERF-----AAPPASLEGEIRFETLRS 119 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVNTTDSAVR TH+ +G+ V+ Q +RSQH NK A ++ +L + + + Sbjct: 120 SGPGGQHVNTTDSAVRATHLASGISVRVQSQRSQHANKRLAILLIARRLADQASSAADAL 179 Query: 296 ANIGESSKTEIGWG 309 + I G Sbjct: 180 RAERRRAHGRISRG 193 >gi|15600663|ref|NP_254157.1| peptide chain release factor-like protein [Pseudomonas aeruginosa PAO1] gi|254237846|ref|ZP_04931169.1| hypothetical protein PACG_03946 [Pseudomonas aeruginosa C3719] gi|254243022|ref|ZP_04936344.1| hypothetical protein PA2G_03810 [Pseudomonas aeruginosa 2192] gi|9951802|gb|AAG08855.1|AE004959_11 probable peptide chain release factor [Pseudomonas aeruginosa PAO1] gi|126169777|gb|EAZ55288.1| hypothetical protein PACG_03946 [Pseudomonas aeruginosa C3719] gi|126196400|gb|EAZ60463.1| hypothetical protein PA2G_03810 [Pseudomonas aeruginosa 2192] Length = 204 Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 6/194 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175 L++ A G E A + + E +E GE +S L ++G Sbjct: 2 ILLQLSAAQGPAECCLAVAKAFERLCLEAAQAGVEVEVIEEVAGERPRTWRSLLLGLRGT 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A + G + + SPY + R F + + E + R +T R+ Sbjct: 62 AAEALAERWCGGIQWICPSPYRARHARKNWFIGAERF-----AAPPASLEGEIRFETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295 SG GGQHVNTTDSAVR TH+ +G+ V+ Q +RSQH NK A ++ +L + + + Sbjct: 117 SGPGGQHVNTTDSAVRATHLASGISVRVQSQRSQHANKRLAILLIARRLADQASSAADAL 176 Query: 296 ANIGESSKTEIGWG 309 + I G Sbjct: 177 RAERRRAHGRISRG 190 >gi|170728229|ref|YP_001762255.1| peptide chain release factor H [Shewanella woodyi ATCC 51908] gi|169813576|gb|ACA88160.1| peptide chain release factor H [Shewanella woodyi ATCC 51908] Length = 218 Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats. Identities = 52/207 (25%), Positives = 85/207 (41%), Gaps = 9/207 (4%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT------- 169 L++ AG G + L+ + ++ + +E + +E + Sbjct: 2 ILLQLSAGQGPAACCKAIGLALKEIEKQCREKGVAFDLIEAIETKERFCFKSVLLQLESK 61 Query: 170 --LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227 +L + A K QG + SP+ R + W + + + Sbjct: 62 QSVLGEDDLAKQLAKSWQGAMLWICQSPFQLEKNRVKNKRKNWFFSGQMYEFNETELDKE 121 Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 T RASGAGGQHVNTTDSAVR H+ TG+ V+ + ERSQH NK A +L KL Sbjct: 122 VSFQTCRASGAGGQHVNTTDSAVRAIHVATGISVRVESERSQHANKRLARALLFQKLEST 181 Query: 288 ELQKREEIANIGESSKTEIGWGRQIRS 314 ++++ E+ G +++ Sbjct: 182 KVEQMSLQEKARWQQHWEVERGNPVKT 208 >gi|557260|emb|CAA57573.1| protein release factor 1 [Pseudomonas aeruginosa PAO1] Length = 96 Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 19/66 (28%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D R L D + + + RE ++ I ++ + D L Sbjct: 9 LDVLSDRYEELTALLGDAEVISDQDPFRAYSREYAEVEPVILRFRDYRKVQADLEGAQAL 68 Query: 76 ALEEDD 81 + D Sbjct: 69 LKDSDP 74 >gi|207093409|ref|ZP_03241196.1| peptide chain release factor 2 [Helicobacter pylori HPKX_438_AG0C1] Length = 111 Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 49/99 (49%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 13 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101 +D L +++ L ELA ++D L + ++ V+ Sbjct: 73 KDSLDESVELFELAQNDNDEITLSLLYEEAPILEHSVQK 111 >gi|297569022|ref|YP_003690366.1| ABC transporter related protein [Desulfurivibrio alkaliphilus AHT2] gi|296924937|gb|ADH85747.1| ABC transporter related protein [Desulfurivibrio alkaliphilus AHT2] Length = 668 Score = 53.7 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 21/60 (35%), Gaps = 1/60 (1%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKEIQDRLCDNLILL 73 + + QR L DP ++ E L +E L+ + + + + +L Sbjct: 606 EVEKQEQRKDELEKLLADPEIYHRQEEFAELSKEYAELERRLERLYDQWEKVNSEIEEIL 665 >gi|703443|gb|AAB02290.1| release factor 1 [Streptococcus gordonii] Length = 67 Score = 53.7 bits (127), Expect = 5e-05, Method: Composition-based stats. Identities = 9/60 (15%), Positives = 20/60 (33%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 R L DP + + L +E + ++ +E + L + + E+ Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66 >gi|169841079|ref|ZP_02874192.1| hypothetical protein cdivTM_28268 [candidate division TM7 single-cell isolate TM7a] Length = 65 Score = 53.3 bits (126), Expect = 6e-05, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 26/66 (39%), Gaps = 1/66 (1%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + GG+FD +N ++ L +T + W N ++ +++ + ++ Sbjct: 1 MKKSGGIFDIENLKNEINELEKRTFEADFW-NTDNSQEILKNISAKKKLLEEYDKLNGLF 59 Query: 67 CDNLIL 72 D + Sbjct: 60 EDVSTI 65 >gi|293413513|ref|ZP_06656162.1| hypothetical protein ECDG_00053 [Escherichia coli B185] gi|291433571|gb|EFF06544.1| hypothetical protein ECDG_00053 [Escherichia coli B185] Length = 122 Score = 52.9 bits (125), Expect = 8e-05, Method: Composition-based stats. Identities = 35/84 (41%), Positives = 49/84 (58%) Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290 DT R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + + Sbjct: 30 DTLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQE 89 Query: 291 KREEIANIGESSKTEIGWGRQIRS 314 + + +I G R+ Sbjct: 90 NSAALKSQRRMFHHQIERGNPRRT 113 >gi|261884219|ref|ZP_06008258.1| peptide chain release factor 2 [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 115 Score = 52.5 bits (124), Expect = 9e-05, Method: Composition-based stats. Identities = 44/113 (38%), Positives = 67/113 (59%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 + N + K ++ + D L ELA EDD + ++ Q ++ ++ + +LSGE Sbjct: 2 ISNMLCKFKNVKSAISDAYELYELANAEDDEQTINSLFEDAQNLENKITNLEISMMLSGE 61 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164 DS +A + +H GAGGTES DWA+ML RMY R+ E+ FK E L+ +G+EAG Sbjct: 62 DDSKNAIVSIHPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGDEAG 114 >gi|290984795|ref|XP_002675112.1| predicted protein [Naegleria gruberi] gi|284088706|gb|EFC42368.1| predicted protein [Naegleria gruberi] Length = 156 Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 60/150 (40%), Positives = 91/150 (60%), Gaps = 2/150 (1%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 L++ ++FI + +N LL+L+ E+D +++ +L + +E K+ ES LSG Sbjct: 2 LEDQLNFIDNTIADINNNEELLKLSEMENDKEMIEYIQKSLSDLINVLEKKEIESFLSGP 61 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE--EAGIKSAT 169 DS D YLE+H GAGG ++ DW+ MLL MY + + + + D E GI+SA Sbjct: 62 HDSKDCYLEIHTGAGGEDASDWSQMLLNMYINCLRGSELSSFEVTLEDTSFKETGIRSAL 121 Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199 L I G AYG+LK EQGVHRLVR+SP++++ Sbjct: 122 LFISGRYAYGYLKHEQGVHRLVRLSPFNAD 151 >gi|328463691|gb|EGF35277.1| peptide chain release factor 1 [Lactobacillus rhamnosus MTCC 5462] Length = 76 Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 10/55 (18%), Positives = 20/55 (36%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 D + R L DP + + L +E + + ++ K+ + L D Sbjct: 2 DGLLVRYEGLEELMSDPEVISDTKRYLALSKEEGGMRDVVAAYKKYKQVLSDIKE 56 >gi|213420646|ref|ZP_03353712.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 112 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 57/109 (52%), Positives = 72/109 (66%) Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 L D LLELA+E DD E L ++ ++ +F + SGE DS D YL++ A Sbjct: 3 QGLDDVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQA 62 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172 G+GGTE+QDWA+MLLRMY RWAE R FKTE +E +GE AGIKSAT+ I Sbjct: 63 GSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKI 111 >gi|169840002|ref|ZP_02873190.1| peptide chain release factor 2 [candidate division TM7 single-cell isolate TM7a] Length = 86 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 42/86 (48%), Positives = 58/86 (67%) Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + E+ I++ D RID YR+ G GGQ VNTTDSAVRITH+PTG+ V Q ERSQ +NK A Sbjct: 1 TTDEVNINDKDLRIDVYRSGGRGGQGVNTTDSAVRITHLPTGITVAIQNERSQIQNKETA 60 Query: 277 WNMLRAKLYELELQKREEIANIGESS 302 +LR+KL +++ ++ E N + Sbjct: 61 LKILRSKLAQIQTEQHAETINDLRAR 86 >gi|326564767|gb|EGE14979.1| peptide chain release factor 2 [Moraxella catarrhalis 46P47B1] Length = 62 Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 20/37 (54%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKM 44 GG+FD ++ +RL +N + E+P +W N A Sbjct: 3 KSFGGIFDIESKKERLEEVNLELENPDIWNNPDLATK 39 >gi|283780964|ref|YP_003371719.1| peptide chain release factor I [Pirellula staleyi DSM 6068] gi|283439417|gb|ADB17859.1| Class I peptide chain release factor [Pirellula staleyi DSM 6068] Length = 191 Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 7/112 (6%) Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 S V ++ +E +C+I+ R G GGQH N ++AV ITH PTG+ Q + Sbjct: 18 ASLAMVDAPHPAALPLEKLARECQIEFTRRGGPGGQHRNKVETAVVITHQPTGLAGQASE 77 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIA-------NIGESSKTEIGWGR 310 RSQ N+ +A+ LR +L +RE A + +I G Sbjct: 78 TRSQDHNREEAYQRLRIELATGLRTRREPTAPISPLWEKFRKGRAVQINPGH 129 >gi|207108877|ref|ZP_03243039.1| peptide chain release factor 2 [Helicobacter pylori HPKX_438_CA4C1] Length = 85 Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 37/71 (52%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L + + + + + Q L + + EDP+ WQ+V++A+ +E+ L+ + ++ Sbjct: 13 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72 Query: 63 QDRLCDNLILL 73 +D L +++ L Sbjct: 73 KDSLDESVDCL 83 >gi|291533126|emb|CBL06239.1| hypothetical protein MHY_13580 [Megamonas hypermegale ART12/1] Length = 121 Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 45/95 (47%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 +P W + +A+ + +E + + K I + + IL E+ +E+ D ++ + Sbjct: 1 MGEPTFWDDPDQAQKITQELNGVKAGVDKYKNILHKFEEMQILWEMGMEDKDETVCDDVE 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 ++ I +E + E LLSG+ D+N+A + Sbjct: 61 AEIKEINEAIEQLELELLLSGKYDANNAIFDSTCR 95 >gi|259235601|gb|ACW20312.1| peptide release factor protein 2 [Francisella cf. novicida 3523] Length = 111 Score = 50.6 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 38/113 (33%), Positives = 63/113 (55%), Gaps = 2/113 (1%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89 ED +W N A+ L +++ L+N + + I + L LLELA E++ Sbjct: 1 LEDGSIWDNPEYAQNLGKQKVELENVVHNCEHISETLETLSELLELAEEDETLMQEIAKD 60 Query: 90 DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142 ++ E +F + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY Sbjct: 61 TQDVASEI--EKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYM 111 >gi|297851766|ref|XP_002893764.1| hypothetical protein ARALYDRAFT_473511 [Arabidopsis lyrata subsp. lyrata] gi|297339606|gb|EFH70023.1| hypothetical protein ARALYDRAFT_473511 [Arabidopsis lyrata subsp. lyrata] Length = 256 Score = 50.6 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 41/116 (35%), Positives = 53/116 (45%), Gaps = 9/116 (7%) Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 V + CR++T+R SG GGQH N DSAVR+ H+PTG+V Q + Sbjct: 75 SVVADVQSPNYLKFTDDELMKQCRLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVAQAVE 134 Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---------GWGRQI 312 +RSQHKN+A A N LR L K + A +I G QI Sbjct: 135 DRSQHKNRASALNRLRTLLAIKVRNKVDLEAYAPPPELLQILPPKSTIRTSSGSQI 190 >gi|297517598|ref|ZP_06935984.1| peptide chain release factor 1 [Escherichia coli OP50] Length = 92 Score = 50.6 bits (119), Expect = 4e-04, Method: Composition-based stats. Identities = 9/76 (11%), Positives = 21/76 (27%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 + +R + D + + L RE L + + Q D + Sbjct: 9 LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68 Query: 76 ALEEDDCSILQETSDN 91 + + + Q+ Sbjct: 69 LDDPEMREMAQDELRE 84 >gi|110224569|emb|CAJ98782.1| peptide release factor protein 2 [Francisella novicida] gi|259236249|gb|ACW20342.1| PrfB [Francisella sp. FnSp1] Length = 101 Score = 50.2 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 2/103 (1%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 D +W N A+ L +++ L+N + + I + L L++LA E++ Sbjct: 1 DGSIWDNPEYAQNLGKQKVELENVVHNCEHISETLQTLTELIDLAEEDESLMQEIAKDTQ 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 ++ E +F + SG+ D+N+A+L++ +G+GGTE+QDWA Sbjct: 61 DVASEI--EKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWA 101 >gi|94269500|ref|ZP_01291480.1| ABC transporter related [delta proteobacterium MLMS-1] gi|93451197|gb|EAT02108.1| ABC transporter related [delta proteobacterium MLMS-1] Length = 301 Score = 50.2 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 4/61 (6%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQH----LDNAISFIKEIQDRLCDNL 70 + D R + L + DP + + L +E L++ ++Q L Sbjct: 240 EVDKLEGRKAALEKQLADPETYNRQDQFTELSKEYAEVQRRLESLYEQWDQLQQELETLQ 299 Query: 71 I 71 Sbjct: 300 T 300 >gi|94263448|ref|ZP_01287261.1| ABC transporter related [delta proteobacterium MLMS-1] gi|93456178|gb|EAT06317.1| ABC transporter related [delta proteobacterium MLMS-1] Length = 682 Score = 50.2 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 4/61 (6%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQH----LDNAISFIKEIQDRLCDNL 70 + D R + L + DP + + L +E L++ ++Q L Sbjct: 621 EVDKLEGRKAALEKQLADPETYNRQDQFTELSKEYAEVQRRLESLYEQWDQLQQELETLQ 680 Query: 71 I 71 Sbjct: 681 T 681 >gi|12329992|emb|CAC24560.1| mitochondrial peptide chain release factor [Platichthys flesus] Length = 183 Score = 50.2 bits (118), Expect = 5e-04, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 76/190 (40%), Gaps = 12/190 (6%) Query: 50 QHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS 109 + L+ S ++ ++ ++++ EE+ +I E + + Sbjct: 1 RDLEEVRSLLQGSAGAKDEDEQVMQMLKEEE--------EHISSKILALREDLIKALVPA 52 Query: 110 GEADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167 DS++ LEV +G GG Q + + MY +A + + E + G+ Sbjct: 53 DPLDSSNDLLEVVSGRTTGGDICQQFTKEMFDMYQGFAFYKNWDFEVYNYTSADFGGLHH 112 Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISE 225 A + I G N Y LK E G HR+ RI +SR + + + ++ I Sbjct: 113 AAVRIAGDNVYRHLKHEGGTHRVQRIPEVGLSSRMQRIHTGTMTVIILPQPVEFDVHIDP 172 Query: 226 SDCRIDTYRA 235 D RIDT+RA Sbjct: 173 KDLRIDTFRA 182 >gi|39943940|ref|XP_361507.1| conserved hypothetical protein [Magnaporthe oryzae 70-15] gi|58257471|gb|AAW69357.1| peptide chain release factor-like protein [Magnaporthe grisea] gi|145014700|gb|EDJ99268.1| conserved hypothetical protein [Magnaporthe oryzae 70-15] Length = 195 Score = 49.8 bits (117), Expect = 7e-04, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 13/154 (8%) Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222 AG ++ + + + + S + + +F++ W+ S Sbjct: 5 AGHMMISIFARCRQVVSFSQSIGALSHHSGRSGWSHPMPQARTFTTSWLPLKQMPSRPKP 64 Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 E++ + SG GGQ +N T+SAV++ HIPTG+VV+CQ+ RS+ +N+ A +L Sbjct: 65 PPETEIEESFLKGSGPGGQKINKTNSAVQLKHIPTGIVVKCQETRSRDQNRKIARQLLAT 124 Query: 283 KLYEL-------------ELQKREEIANIGESSK 303 +L +L K+ A + K Sbjct: 125 RLDDLNNGDQSRSAIVGAHKVKKRASAAKKSARK 158 >gi|116878616|ref|YP_357940.2| putative peptide chain release factor [Pelobacter carbinolicus DSM 2380] gi|114843252|gb|ABA89770.2| putative peptide chain release factor [Pelobacter carbinolicus DSM 2380] Length = 138 Score = 49.4 bits (116), Expect = 8e-04, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 4/118 (3%) Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + +S S +R S + P + + I++ D I ++A G GGQH N T++A Sbjct: 1 MTHMSVLRSIDKRKISTMAGLKRPAPSRNGVMTINKQDLDITFFKAGGPGGQHRNKTETA 60 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA----NIGESSK 303 VRI H P+G+ V + RS+ N A L +L + + R IA + Sbjct: 61 VRIHHRPSGITVTASERRSRQANIEHALERLAQRLEAMRRKPRRRIATKPGKAARERR 118 >gi|281599646|gb|ADA72630.1| putative peptide chain release factor H [Shigella flexneri 2002017] gi|313646632|gb|EFS11091.1| putative peptide chain release factor H [Shigella flexneri 2a str. 2457T] gi|332761634|gb|EGJ91914.1| putative peptide chain release factor H [Shigella flexneri 4343-70] gi|332761778|gb|EGJ92057.1| putative peptide chain release factor H [Shigella flexneri 2747-71] gi|332764451|gb|EGJ94684.1| putative peptide chain release factor H [Shigella flexneri K-671] gi|332768583|gb|EGJ98765.1| putative peptide chain release factor H [Shigella flexneri 2930-71] gi|333008731|gb|EGK28195.1| putative peptide chain release factor H [Shigella flexneri K-218] gi|333009717|gb|EGK29167.1| putative peptide chain release factor H [Shigella flexneri VA-6] gi|333010787|gb|EGK30213.1| putative peptide chain release factor H [Shigella flexneri K-272] gi|333021285|gb|EGK40538.1| putative peptide chain release factor H [Shigella flexneri K-227] gi|333022100|gb|EGK41343.1| putative peptide chain release factor H [Shigella flexneri K-304] Length = 131 Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 5/119 (4%) Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + + G NA+ + G + + SPY + R F I + + + R Sbjct: 18 ISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 72 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + Sbjct: 73 YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLDQQQ 131 >gi|320352217|ref|YP_004193556.1| ABC transporter-like protein [Desulfobulbus propionicus DSM 2032] gi|320120719|gb|ADW16265.1| ABC transporter related protein [Desulfobulbus propionicus DSM 2032] Length = 666 Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 7/68 (10%), Positives = 20/68 (29%), Gaps = 1/68 (1%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS-FIKEIQDRLCDNLILL 73 + + R + L DP L+ + +E ++ + + ++ + Sbjct: 599 EIERYESRKAELEALMADPDLYGDQERWSATSKEYGQVERHLERAYQRWEEAQQAIEAIE 658 Query: 74 ELALEEDD 81 D Sbjct: 659 REVAAHDQ 666 >gi|24111726|ref|NP_706236.1| peptide chain release factor 2 [Shigella flexneri 2a str. 301] gi|30061853|ref|NP_836024.1| peptide chain release factor 2 [Shigella flexneri 2a str. 2457T] gi|24050507|gb|AAN41943.1| probable peptide chain release factor [Shigella flexneri 2a str. 301] gi|30040097|gb|AAP15830.1| probable peptide chain release factor [Shigella flexneri 2a str. 2457T] Length = 151 Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 5/119 (4%) Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + + G NA+ + G + + SPY + R F I + + + R Sbjct: 38 ISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 92 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK A ++ KL + + Sbjct: 93 YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLDQQQ 151 >gi|260792422|ref|XP_002591214.1| hypothetical protein BRAFLDRAFT_247522 [Branchiostoma floridae] gi|229276417|gb|EEN47225.1| hypothetical protein BRAFLDRAFT_247522 [Branchiostoma floridae] Length = 99 Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 4/74 (5%) Query: 277 WNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 ++A+LY+++L ++ + + +IR+Y V D R + + Sbjct: 1 MTTIQARLYQMKLDQQRSQQQLARQQQMGTAARSEKIRTYNF-TQDRVTDHRAGVNMFNL 59 Query: 336 SDVLDG--DLDDFM 347 D L G LD+ + Sbjct: 60 QDFLLGGDRLDEMI 73 >gi|12322377|gb|AAG51209.1|AC051630_6 peptide chain release factor, putative; 8726-9996 [Arabidopsis thaliana] Length = 255 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 51/97 (52%), Gaps = 9/97 (9%) Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 CR++T+R SG GGQH N DSAVR+ H+PTG+V Q ++RSQHKN+A A N LR L Sbjct: 95 MKQCRLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVAQAVEDRSQHKNRASALNRLRTLL 154 Query: 285 YELELQKREEIANIGESSKTEI---------GWGRQI 312 K + A +I G QI Sbjct: 155 AIKVRNKVDIEAYAPPPELLQILPPKSTIRTSSGSQI 191 >gi|30692851|ref|NP_174601.2| peptide chain release factor, putative [Arabidopsis thaliana] gi|12322576|gb|AAG51290.1|AC027035_13 unknown protein [Arabidopsis thaliana] gi|26450075|dbj|BAC42157.1| putative peptide chain release factor [Arabidopsis thaliana] gi|29824307|gb|AAP04114.1| putative peptide chain release factor [Arabidopsis thaliana] gi|332193463|gb|AEE31584.1| Class I peptide chain release factor [Arabidopsis thaliana] Length = 257 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 40/97 (41%), Positives = 51/97 (52%), Gaps = 9/97 (9%) Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 CR++T+R SG GGQH N DSAVR+ H+PTG+V Q ++RSQHKN+A A N LR L Sbjct: 95 MKQCRLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVAQAVEDRSQHKNRASALNRLRTLL 154 Query: 285 YELELQKREEIANIGESSKTEI---------GWGRQI 312 K + A +I G QI Sbjct: 155 AIKVRNKVDIEAYAPPPELLQILPPKSTIRTSSGSQI 191 >gi|224127830|ref|XP_002329188.1| predicted protein [Populus trichocarpa] gi|222870969|gb|EEF08100.1| predicted protein [Populus trichocarpa] Length = 257 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 31/63 (49%), Positives = 42/63 (66%) Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 C +DT++ASG GGQH N +SAVR+ H+PTG++ Q ++RSQH N+A A LRA L Sbjct: 99 MRQCEMDTFKASGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHMNRASALKRLRALL 158 Query: 285 YEL 287 Sbjct: 159 AIR 161 >gi|225629578|ref|ZP_03787603.1| Protein chain release factor B [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591567|gb|EEH12582.1| Protein chain release factor B [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 69 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 29/52 (55%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 RL L+++ + LWQ+ +A+ +++ER + N + +++ D + L+ Sbjct: 2 RLEELDSQASNDDLWQDNQKAQEVLKERSKIKNDVESFLKLESDYNDAISLM 53 >gi|169838095|ref|ZP_02871283.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [candidate division TM7 single-cell isolate TM7a] Length = 157 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 24/73 (32%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D+ V + L K DP + + + + +D + + R + L E Sbjct: 5 LDDVVLKHKELTEKLMDPEVVSDPKKIMEYNKALNSIDEVVKKYTYYKSRKEELEGLKED 64 Query: 76 ALEEDDCSILQET 88 E D + + Sbjct: 65 LKIEKDAEMKEMM 77 >gi|148988471|ref|ZP_01819918.1| peptide chain release factor 1 [Streptococcus pneumoniae SP6-BS73] gi|147926152|gb|EDK77226.1| peptide chain release factor 1 [Streptococcus pneumoniae SP6-BS73] Length = 67 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 9/55 (16%), Positives = 17/55 (30%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 R L DP + + L +E + + +E + L +N Sbjct: 7 LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNNR 61 >gi|47226435|emb|CAG08451.1| unnamed protein product [Tetraodon nigroviridis] Length = 156 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 8/108 (7%) Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 F ++ ++E D R SG GGQ N T + V + HIP+G+VV+C Sbjct: 36 GFLCVFAAGKKGLIDPPVLNEDDLEEQFVRGSGPGGQATNKTSNCVVLKHIPSGIVVKCH 95 Query: 265 QERSQHKNKAQAWNMLRAKLYELEL--------QKREEIANIGESSKT 304 Q RS N+ +A +++R KL L+ +K+E + K Sbjct: 96 QTRSVDINRKRARDIMREKLDVLQKGELSEILVKKKESELRKQDKRKK 143 >gi|148252694|ref|YP_001237279.1| class I peptide chain release factor domain-containing protein [Bradyrhizobium sp. BTAi1] gi|146404867|gb|ABQ33373.1| putative Class I peptide chain release factor domain protein [Bradyrhizobium sp. BTAi1] Length = 207 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%) Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQ-GVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216 ++ + G SA +++ GP A + G V SP + R F I P Sbjct: 42 NEADRLGPASAIVVLDGPLADQIAQRWTQGPLLWVCRSPLRPHHGRKNWFVGIVDLP--L 99 Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 +++ +D R +++RA G GGQH N T+SAVR H+PTG+ + RSQH+N+A A Sbjct: 100 PHQVPDLAAADVRCESFRAGGPGGQHQNKTESAVRAIHLPTGLTAIARDGRSQHRNRALA 159 Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG 309 L A L A + ++ + G Sbjct: 160 LTRLAALLDGRARLAEAGEARLVHAAHDRVQRG 192 >gi|302791615|ref|XP_002977574.1| hypothetical protein SELMODRAFT_417426 [Selaginella moellendorffii] gi|300154944|gb|EFJ21578.1| hypothetical protein SELMODRAFT_417426 [Selaginella moellendorffii] Length = 207 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 30/59 (50%), Positives = 43/59 (72%) Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 C++DT+RA+G GGQH N T+SAVR+ H+PTG+V Q ++RSQH+N+ A LR + Sbjct: 48 QCKMDTFRATGPGGQHRNKTESAVRLKHLPTGLVSQASEDRSQHRNRDSAVQRLRHTIA 106 >gi|302786792|ref|XP_002975167.1| hypothetical protein SELMODRAFT_415236 [Selaginella moellendorffii] gi|300157326|gb|EFJ23952.1| hypothetical protein SELMODRAFT_415236 [Selaginella moellendorffii] Length = 411 Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 30/59 (50%), Positives = 43/59 (72%) Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 C++DT+RA+G GGQH N T+SAVR+ H+PTG+V Q ++RSQH+N+ A LR + Sbjct: 48 QCKMDTFRATGPGGQHRNKTESAVRLKHLPTGLVSQASEDRSQHRNRESAVQRLRHTIA 106 >gi|77415301|ref|ZP_00791262.1| peptide chain release factor 1 [Streptococcus agalactiae 515] gi|77158648|gb|EAO69998.1| peptide chain release factor 1 [Streptococcus agalactiae 515] Length = 53 Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 17/52 (32%) Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 R L DP + + L RE + ++ +E + + + Sbjct: 1 RYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVISNISDAE 52 >gi|71027353|ref|XP_763320.1| peptide chain release factor 1 [Theileria parva strain Muguga] gi|68350273|gb|EAN31037.1| peptide chain release factor 1, putative [Theileria parva] Length = 299 Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 58/228 (25%), Positives = 93/228 (40%), Gaps = 22/228 (9%) Query: 35 LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LILLELALEEDDCSILQETSDN 91 + E+ +E +S +I ++ + L ++ + D + Sbjct: 48 FIEEPNES---TKELVD-SEILSLYHQIYPQILQHSLGENLTDMNVNLRDMNENLRDEFV 103 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151 R KL S + + L+V G GG ES +A L MY K Sbjct: 104 NLRRKLVDMQNSLFSGSLHTLNYHKILLQVLQGVGGEESGKFAAELYDMYANICNLNNLK 163 Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211 IK ++ + E GVHR+ R+ ++ R TS + + V Sbjct: 164 H------------IKHPNNTLEIFQGLDRFRYEFGVHRVQRVPF--NSRRIQTSSAVVTV 209 Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259 P + +I I SD ++T R+SG+GGQ VN +++AVRITHIPTG+ Sbjct: 210 VPHFNV-EDINIKSSDLMVETMRSSGSGGQSVNKSETAVRITHIPTGI 256 >gi|149626821|ref|XP_001515177.1| PREDICTED: similar to peptide chain release factor 1, putative, partial [Ornithorhynchus anatinus] Length = 612 Score = 47.1 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 62/238 (26%), Positives = 95/238 (39%), Gaps = 21/238 (8%) Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ CD +L D L TS R KL Q + + Sbjct: 41 VESDCCDASATQQLLFRVFDEICLGATSQPKTRTKLTQLKSQLCCGDLYRTPNPTNGGGI 100 Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181 G GG E+ +AN L MY + + + + E + +L Sbjct: 101 TPGIGGAEAAYFANELFEMYKNFCHSTNIQNTQINQNTLE-------IFDLGFSQNAKYL 153 Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP------------VVDDSIEIEISESDCR 229 E GVHR+ RI +++R TS + + V P I SD Sbjct: 154 LYEFGVHRVQRIPK--NSNRIQTSTAVVTVVPTGWSSCHGGRGSKDSPHIGDSFKPSDVI 211 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 ++T R+ GAGGQ VN +++AVR+TH+PTG+ V CQ SQ NK+ A ++ ++ Sbjct: 212 METMRSRGAGGQSVNKSETAVRVTHVPTGMSVSCQDTSSQIDNKSLALGKVKGMSLDM 269 >gi|209736218|gb|ACI68978.1| C12orf65 homolog [Salmo salar] Length = 166 Score = 47.1 bits (110), Expect = 0.004, Method: Composition-based stats. Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 3/105 (2%) Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 S + + D ++E + R SG GGQ N T + V + HIPTG+VV+C Sbjct: 32 VSLAHVQSNGKKDYIDLPVLNEDELDEQFVRGSGPGGQATNKTSNCVVLRHIPTGIVVKC 91 Query: 264 QQERSQHKNKAQAWNMLRAKL---YELELQKREEIANIGESSKTE 305 Q RS N+ +A ++R KL Y+ E + K + Sbjct: 92 HQTRSVETNRKRARRIMREKLEVTYKGEESDILKNKKESIQRKQD 136 >gi|72012906|ref|XP_786280.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115976395|ref|XP_001185479.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 101 Score = 46.7 bits (109), Expect = 0.005, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 31/86 (36%), Gaps = 15/86 (17%) Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS-------YVLQPYQMVKDL 326 ML+ ++Y L ++ ++ +++ G +IR+ Y Q + D Sbjct: 1 MTMLQPRIYNRILA--DQTSSERSMRCSQVSRGGRSEKIRTTNPNLYNYNYQ-QDRITDH 57 Query: 327 RTNIEKTSPSDVLDGD--LDDFMKAT 350 R L G LD+ + + Sbjct: 58 RRGRTVHGVPAYLLGSELLDEMVTSY 83 >gi|291239031|ref|XP_002739431.1| PREDICTED: C12orf65 homolog [Saccoglossus kowalevskii] Length = 160 Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 9/93 (9%) Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I+E + R SG GGQ N T + V + HIP+G+ V+C Q RSQ KN+ + +LR Sbjct: 51 INEDELDEQFVRGSGPGGQATNKTSNCVVLKHIPSGITVKCHQTRSQSKNRELSRRILRE 110 Query: 283 KLY---------ELELQKREEIANIGESSKTEI 306 KL + +K+EE + K+++ Sbjct: 111 KLDVFYKGDESIIVIEKKKEEKRRQEKKRKSKV 143 >gi|213514146|ref|NP_001134302.1| CL065 protein [Salmo salar] gi|209732210|gb|ACI66974.1| C12orf65 homolog [Salmo salar] Length = 166 Score = 46.3 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 3/105 (2%) Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 S + + D ++E + R SG GGQ N T + V + HIPTG+VV+C Sbjct: 32 VSLAHVQSNGKKDYIDLPVLNEDELDEQFVRGSGPGGQATNKTSNCVVLRHIPTGIVVKC 91 Query: 264 QQERSQHKNKAQAWNMLRAKL---YELELQKREEIANIGESSKTE 305 Q RS N+ +A ++R KL Y+ E + K + Sbjct: 92 HQTRSVETNRKRARQIMREKLEVTYKGEESDILKNKKESIQRKQD 136 >gi|146343293|ref|YP_001208341.1| class I peptide chain release factor domain-containing protein [Bradyrhizobium sp. ORS278] gi|146196099|emb|CAL80126.1| putative Class I peptide chain release factor domain protein [Bradyrhizobium sp. ORS278] Length = 207 Score = 46.3 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 40/128 (31%), Positives = 58/128 (45%), Gaps = 2/128 (1%) Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241 + +G V SP + R F I P + +S SD R +++RA G GGQ Sbjct: 67 RWTRGSLLWVCRSPLRPHHGRKNWFVGIVDLP--LPAQLPMLSTSDVRFESFRAGGPGGQ 124 Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301 H N T+SAVR H+P+G+ + RSQH NKA A L A L + ++ Sbjct: 125 HQNKTESAVRAVHLPSGLTAIARDGRSQHGNKALAIARLAALLDGRARVAEAGEVRLVQA 184 Query: 302 SKTEIGWG 309 + + G Sbjct: 185 AHGRVERG 192 >gi|255945923|ref|XP_002563729.1| Pc20g12440 [Penicillium chrysogenum Wisconsin 54-1255] gi|211588464|emb|CAP86573.1| Pc20g12440 [Penicillium chrysogenum Wisconsin 54-1255] Length = 186 Score = 46.3 bits (108), Expect = 0.007, Method: Composition-based stats. Identities = 36/100 (36%), Positives = 55/100 (55%) Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248 RL + + + FS + P ++IS++D I + +G GGQ +N T+S Sbjct: 4 RLHWWTSSRTLAAPARLFSQTPIVPAKPLPPRLKISDADISISYLKGTGPGGQKINKTNS 63 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 AV+I H P+GVVV+CQ RSQ +N A ++L K+ LE Sbjct: 64 AVQIIHKPSGVVVKCQATRSQSQNAKIARSLLADKIEALE 103 >gi|207094293|ref|ZP_03242080.1| hypothetical protein HpylHP_16247 [Helicobacter pylori HPKX_438_AG0C1] Length = 34 Score = 46.3 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 17/31 (54%) Query: 288 ELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318 + +++ A +IGWG QIRSYVL Sbjct: 4 KQEEQAAKAAGIRGDVKDIGWGSQIRSYVLH 34 >gi|225715830|gb|ACO13761.1| C12orf65 homolog [Esox lucius] Length = 167 Score = 46.0 bits (107), Expect = 0.010, Method: Composition-based stats. Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 3/108 (2%) Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 + D ++E + R SG GGQ N T + V + H PTG+VV+ Sbjct: 32 AVGIGKVQTAGRKDYIDLPALNEDELDEQFVRGSGPGGQATNKTSNCVVLRHNPTGIVVK 91 Query: 263 CQQERSQHKNKAQAWNMLRAKL---YELELQKREEIANIGESSKTEIG 307 C Q RS N+ +A ++R KL Y+ E + K + G Sbjct: 92 CHQTRSVETNRKRARQIMREKLEVIYKGEESDILKNKKESIQRKQDKG 139 >gi|55639161|ref|XP_509459.1| PREDICTED: probable peptide chain release factor C12orf65, mitochondrial-like isoform 5 [Pan troglodytes] gi|114647627|ref|XP_001169334.1| PREDICTED: probable peptide chain release factor C12orf65, mitochondrial-like isoform 1 [Pan troglodytes] gi|114647629|ref|XP_001169362.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes] gi|114647631|ref|XP_001169383.1| PREDICTED: probable peptide chain release factor C12orf65, mitochondrial-like isoform 3 [Pan troglodytes] gi|114647633|ref|XP_001169404.1| PREDICTED: hypothetical protein isoform 4 [Pan troglodytes] gi|332840720|ref|XP_003314049.1| PREDICTED: probable peptide chain release factor C12orf65, mitochondrial-like [Pan troglodytes] gi|332840723|ref|XP_003314050.1| PREDICTED: probable peptide chain release factor C12orf65, mitochondrial-like [Pan troglodytes] Length = 166 Score = 45.6 bits (106), Expect = 0.012, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 7/103 (6%) Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + + D + + E++ + G GGQ N T + V + HIP+G+VV+C Q RS Sbjct: 41 VQMAGKKDYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRS 100 Query: 269 QHKNKAQAWNMLRAKLYELE-------LQKREEIANIGESSKT 304 +N+ A +L+ K+ ++++E + K Sbjct: 101 VDQNRKLARKILQEKVDVFYNGENSPVHKEKQEAVKKKQERKK 143 >gi|332030644|gb|EGI70332.1| Uncharacterized protein C12orf65-like protein [Acromyrmex echinatior] Length = 163 Score = 45.6 bits (106), Expect = 0.013, Method: Composition-based stats. Identities = 36/92 (39%), Positives = 49/92 (53%) Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +D S ++ E D R SG GGQ N T++AV + H PTG+VV+C + RSQ NK Sbjct: 47 YLDYSNVPKLDEIDLEEQFIRGSGPGGQATNKTNNAVLLKHKPTGLVVKCHETRSQWDNK 106 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTE 305 +A +L KL L ++R A I K E Sbjct: 107 KRAREILVTKLDNLLNKERSIEAQIHALEKKE 138 >gi|125528646|gb|EAY76760.1| hypothetical protein OsI_04716 [Oryza sativa Indica Group] Length = 246 Score = 45.2 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 28/66 (42%), Positives = 41/66 (62%) Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 C + T++ASG GGQH N +SAVR+ H PTG++ Q ++RSQH N+A A + LR + Sbjct: 83 MGQCEMGTFKASGPGGQHRNKRESAVRLRHRPTGIIAQAVEDRSQHMNRASALSRLRTLI 142 Query: 285 YELELQ 290 + Sbjct: 143 ALKVRK 148 >gi|213401645|ref|XP_002171595.1| peptide release factor [Schizosaccharomyces japonicus yFS275] gi|211999642|gb|EEB05302.1| peptide release factor [Schizosaccharomyces japonicus yFS275] Length = 144 Score = 45.2 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 3/102 (2%) Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +VYP + E+D R G GGQ +N T ++ H P+G++V+CQ+ Sbjct: 19 RQSFVYPAFIQQRFYHLVEADLDETFIRGHGPGGQKINKTSIVCQLRHKPSGLIVRCQET 78 Query: 267 RSQHKNKAQAWNMLRAKLYEL---ELQKREEIANIGESSKTE 305 RS+ +N+ A L KL L E + + K + Sbjct: 79 RSREQNRKIARKRLAEKLDLLANGEKSRLAQDRQRILRRKRQ 120 >gi|302761410|ref|XP_002964127.1| hypothetical protein SELMODRAFT_405812 [Selaginella moellendorffii] gi|300167856|gb|EFJ34460.1| hypothetical protein SELMODRAFT_405812 [Selaginella moellendorffii] Length = 388 Score = 45.2 bits (105), Expect = 0.014, Method: Composition-based stats. Identities = 13/32 (40%), Positives = 20/32 (62%) Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 KDLRTN E + S ++ G+L+ + A L K+ Sbjct: 66 KDLRTNAETSDISVIMGGNLEPLLTAYLMSKQ 97 >gi|330720433|gb|EGG98747.1| Peptide chain release factor 1 [gamma proteobacterium IMCC2047] Length = 44 Score = 45.2 bits (105), Expect = 0.015, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 17/32 (53%) Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 D R N+ ++++GD+D ++A + + Sbjct: 2 TDHRINLTLYKLPEIMEGDMDSVIQALVNEHQ 33 >gi|326517198|dbj|BAJ99965.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 170 Score = 45.2 bits (105), Expect = 0.017, Method: Composition-based stats. Identities = 28/66 (42%), Positives = 43/66 (65%) Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 + C + T+++SG GGQH N +SAVR+ H PTG+V Q ++RSQHKN++ A + LR + Sbjct: 7 MAQCDMGTFKSSGPGGQHRNKRESAVRLRHHPTGIVAQAVEDRSQHKNRSSALSRLRTLI 66 Query: 285 YELELQ 290 + Sbjct: 67 ALKVRR 72 >gi|254443205|ref|ZP_05056681.1| ABC transporter, ATP-binding protein [Verrucomicrobiae bacterium DG1235] gi|198257513|gb|EDY81821.1| ABC transporter, ATP-binding protein [Verrucomicrobiae bacterium DG1235] Length = 644 Score = 45.2 bits (105), Expect = 0.017, Method: Composition-based stats. Identities = 9/66 (13%), Positives = 24/66 (36%), Gaps = 2/66 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L+ +L + + + S + DP +++ +++ ++ I E+ Sbjct: 575 LTDKLKKAEA--EIADLESQQSEYEKQMADPDFYKDPKKSQEVLTTYDDNKAKIEAAYEL 632 Query: 63 QDRLCD 68 L D Sbjct: 633 WSDLSD 638 >gi|225717004|gb|ACO14348.1| C12orf65 homolog [Esox lucius] Length = 167 Score = 44.8 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 3/106 (2%) Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 + D ++E + R SG GGQ N T + V + H PTG+VV+ Sbjct: 32 AVGIGKVQAAGKKDYIDLPALNEDELDEQFVRGSGPGGQATNKTSNCVVLRHNPTGIVVK 91 Query: 263 CQQERSQHKNKAQAWNMLRAKL---YELELQKREEIANIGESSKTE 305 C Q RS N+ +A ++R KL Y+ E + K + Sbjct: 92 CHQTRSVETNRKRARQIMREKLEVIYKGEESDILKNKKESIQRKQD 137 >gi|224071118|ref|XP_002189696.1| PREDICTED: similar to CL065 protein [Taeniopygia guttata] Length = 228 Score = 44.8 bits (104), Expect = 0.018, Method: Composition-based stats. Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 9/92 (9%) Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 ISE+D R G GGQ N T++ V + HIP+G+VV+C Q RS KN+ A +L+ Sbjct: 119 ISEADLEEQFVRGDGPGGQATNKTNNCVVLKHIPSGIVVKCHQTRSLEKNRKIAREILQE 178 Query: 283 KLYE---------LELQKREEIANIGESSKTE 305 K+Y + +K E + + + Sbjct: 179 KVYLFYKGEDSDVFKEKKASEKQKQEKKRRAK 210 >gi|262196479|ref|YP_003267688.1| class I peptide chain release factor [Haliangium ochraceum DSM 14365] gi|262079826|gb|ACY15795.1| Class I peptide chain release factor [Haliangium ochraceum DSM 14365] Length = 196 Score = 44.8 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 45/129 (34%), Positives = 65/129 (50%) Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244 G H LV S R F+ + ++ + EI + + RA G GGQHVN Sbjct: 54 VGTHVLVARSSRRGRRARKRWFAGVSIHAQQAATAVAEIRPDEVEVTASRAGGPGGQHVN 113 Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 TTDSAVR+ H +G+ V+ ERSQH+N++ A LR L E E ++R E A + Sbjct: 114 TTDSAVRVRHKASGISVRVAGERSQHRNRSVALTRLRELLGEREQRERAERAKRRRRAHY 173 Query: 305 EIGWGRQIR 313 ++ G +R Sbjct: 174 QLERGGAVR 182 >gi|194214381|ref|XP_001492966.2| PREDICTED: similar to My030 protein [Equus caballus] Length = 166 Score = 44.8 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 3/119 (2%) Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 S + L + P ++ RL S R + + + + D + E Sbjct: 1 MSTSGLFRFPAPLTRIRTVSWGLRLWERPTLLSPGR---AVTRVQMAGKKDRPALPSLEE 57 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 S+ + G GGQ N T + V + H+P+G+VV+C Q RS +N+ A +L+ K+ Sbjct: 58 SELEEQFVKGHGPGGQATNKTSNCVVLKHMPSGIVVKCHQTRSVDQNRKLARKILQEKV 116 >gi|229368188|gb|ACQ59074.1| C12orf65 homolog [Anoplopoma fimbria] Length = 169 Score = 44.8 bits (104), Expect = 0.020, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 8/106 (7%) Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 + + + D + E + R SG GGQ N T + V + HIP+G VV+C Q Sbjct: 38 TCVMIAGKKDLIDLPVLDEDELEEQFVRGSGPGGQATNKTGNCVVLKHIPSGTVVKCHQT 97 Query: 267 RSQHKNKAQAWNMLRAKLY--------ELELQKREEIANIGESSKT 304 RS N+ +A +++R KL E+ ++K+E E + Sbjct: 98 RSVDINRKRARDIMREKLDVVYKGELSEIIVKKKESELRKQEKRRK 143 >gi|74198326|dbj|BAB28408.3| unnamed protein product [Mus musculus] Length = 142 Score = 44.8 bits (104), Expect = 0.021, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 3/102 (2%) Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 + S++ V D + ++ES+ + G GGQ N T + V + H+P+G+VV+C Sbjct: 40 AASTVQVAGRKDYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCH 99 Query: 265 QERSQHKNKAQAWNMLRAKL---YELELQKREEIANIGESSK 303 Q RS +N+ A +L+ K+ Y E + E K Sbjct: 100 QTRSVDQNRKIARKVLQEKVDVFYNGENSPVHKEKLEAERRK 141 >gi|39996074|ref|NP_952025.1| peptidyl-tRNA hydrolase domain-containing protein [Geobacter sulfurreducens PCA] gi|39982839|gb|AAR34298.1| peptidyl-tRNA hydrolase domain protein [Geobacter sulfurreducens PCA] gi|298505090|gb|ADI83813.1| hydrolase, putative [Geobacter sulfurreducens KN400] Length = 107 Score = 44.8 bits (104), Expect = 0.022, Method: Composition-based stats. Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 8/104 (7%) Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 + ++I ++D +++ YRASG GGQH NTTDSAVRI H+PTG+VVQ + RSQ +N+ +A Sbjct: 1 MTVDIRDADIKVEYYRASGPGGQHRNTTDSAVRIRHLPTGIVVQASESRSQAQNREKAME 60 Query: 279 MLRAKLYELELQKREE--------IANIGESSKTEIGWGRQIRS 314 LR L + E + ++ + K +G +++RS Sbjct: 61 RLRIALEKRERKAKKRIATTVPRGAREKRLTEKKLVGMKKKLRS 104 >gi|110224565|emb|CAJ98780.1| peptide release factor protein 2 [Francisella tularensis subsp. mediasiatica] Length = 101 Score = 44.4 bits (103), Expect = 0.025, Method: Composition-based stats. Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 2/103 (1%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 D +W N A+ L +++ L+N + + I L LLEL E++ Sbjct: 1 DGSIWDNPEYAQNLGKQKVELENVVHNCEYISKTLETLSELLELGKEDESLMQEIAKDTQ 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 ++ E +F + SG+ D+N+A+L++ +G+GGTE+QDWA Sbjct: 61 NVASEI--EKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWA 101 >gi|242059479|ref|XP_002458885.1| hypothetical protein SORBIDRAFT_03g042170 [Sorghum bicolor] gi|241930860|gb|EES04005.1| hypothetical protein SORBIDRAFT_03g042170 [Sorghum bicolor] Length = 259 Score = 44.4 bits (103), Expect = 0.028, Method: Composition-based stats. Identities = 29/66 (43%), Positives = 43/66 (65%) Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 C + T++ASG GGQH N +SAVR+ H+PTG++ Q ++RSQHKN+A A + LR + Sbjct: 96 MEQCDMGTFKASGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHKNRASALSRLRTLI 155 Query: 285 YELELQ 290 + Sbjct: 156 ALKVRR 161 >gi|224924358|gb|ACN69129.1| mitochondrial polypeptide chain release factor [Stomoxys calcitrans] Length = 183 Score = 44.4 bits (103), Expect = 0.030, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 7/90 (7%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 ++E D R SG GGQ +N T + V + H+PT +VV+C RS KN+ +A +L Sbjct: 60 PTLNEEDLEETFTRGSGPGGQALNKTSNCVLLRHLPTNIVVKCHIHRSAQKNRVEARKIL 119 Query: 281 RAKL-------YELELQKREEIANIGESSK 303 KL Y ++ Q ++ K Sbjct: 120 LEKLDAQLNGEYSIQSQLKQLENKKSAERK 149 >gi|60679074|gb|AAX33818.1| putative peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni] Length = 40 Score = 44.0 bits (102), Expect = 0.030, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 20/37 (54%) Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355 PYQ VKD R+ + ++LDGD+ ++ L K Sbjct: 2 PYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 38 >gi|302343659|ref|YP_003808188.1| class I peptide chain release factor [Desulfarculus baarsii DSM 2075] gi|301640272|gb|ADK85594.1| Class I peptide chain release factor [Desulfarculus baarsii DSM 2075] Length = 113 Score = 44.0 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 25/73 (34%), Positives = 40/73 (54%) Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 S E + + +RASG GGQH N ++ VR+TH+P+G+VV + RS+ +N+ A Sbjct: 1 MSKPSPPPEHELSWEYFRASGPGGQHRNKVETGVRLTHLPSGLVVSATERRSREQNRQAA 60 Query: 277 WNMLRAKLYELEL 289 L +L + Sbjct: 61 LERLARRLADQAK 73 >gi|149063270|gb|EDM13593.1| rCG21417, isoform CRA_a [Rattus norvegicus] Length = 220 Score = 44.0 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 44/80 (55%) Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 + +++ V D + ++ES+ + G GGQ N T + V + H+P+G+VV+C Sbjct: 76 AATAMQVAGKKDYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCH 135 Query: 265 QERSQHKNKAQAWNMLRAKL 284 Q RS +N+ A +L+ K+ Sbjct: 136 QTRSVDQNRKMARKILQEKV 155 >gi|226320894|ref|ZP_03796445.1| Peptide chain release factor 1 [Borrelia burgdorferi 29805] gi|226233666|gb|EEH32396.1| Peptide chain release factor 1 [Borrelia burgdorferi 29805] Length = 86 Score = 44.0 bits (102), Expect = 0.031, Method: Composition-based stats. Identities = 34/86 (39%), Positives = 51/86 (59%) Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166 + E DS + +E+ AG GG E+ +AN L MY +++EK+K+KTE + ++ E G K Sbjct: 1 MPQDENDSKNIIIEIRAGTGGEEAALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFK 60 Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVR 192 IKG + + LK E GVHR+ R Sbjct: 61 EIIFEIKGKDVFKKLKYESGVHRVQR 86 >gi|218779987|ref|YP_002431305.1| ABC transporter [Desulfatibacillum alkenivorans AK-01] gi|218761371|gb|ACL03837.1| ABC transporter related [Desulfatibacillum alkenivorans AK-01] Length = 666 Score = 44.0 bits (102), Expect = 0.032, Method: Composition-based stats. Identities = 7/72 (9%), Positives = 26/72 (36%), Gaps = 3/72 (4%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-KE 61 + +++ R + ++ DP ++ + +++ L+ E Q + + + + Sbjct: 588 IQKRVQEAEK--KISKLEAREAEISELLADPDVFSDSEKSQPLLEEYQKVKDGLDNLMTA 645 Query: 62 IQDRLCDNLILL 73 + L Sbjct: 646 WEADQEAIEELE 657 >gi|326469360|gb|EGD93369.1| peptidyl-tRNA hydrolase [Trichophyton tonsurans CBS 112818] gi|326483473|gb|EGE07483.1| hypothetical protein TEQG_06610 [Trichophyton equinum CBS 127.97] Length = 191 Score = 44.0 bits (102), Expect = 0.033, Method: Composition-based stats. Identities = 33/96 (34%), Positives = 47/96 (48%) Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R F + + I ES+ + SG GGQ +N T SAV++ HIPT V Sbjct: 27 RNVRFFQASALSLAKQMPPRPTIDESEITGTYLKGSGPGGQKINKTSSAVQLIHIPTNTV 86 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296 V+CQ RSQ +N+ A +L K+ LE ++ A Sbjct: 87 VKCQATRSQSQNRKIAKRILAEKIELLEKGEQSRAA 122 >gi|325185474|emb|CCA19957.1| unnamed protein product putative [Albugo laibachii Nc14] Length = 152 Score = 44.0 bits (102), Expect = 0.035, Method: Composition-based stats. Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 3/99 (3%) Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + E D + SG GGQ +N + V + H PTG+ V+CQ+ R Sbjct: 22 CAANLFQTRNFASAFREEDLNEQFVKGSGKGGQKINKVRNCVLLKHSPTGIQVRCQKTRC 81 Query: 269 QHKNKAQAWNMLRAKLYEL---ELQKREEIANIGESSKT 304 N+ A +L KL +L E R + + K Sbjct: 82 LDDNRRIARKLLTEKLDDLYNGEKSVRNQKIQKIQKRKA 120 >gi|213865384|ref|ZP_03387503.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 55 Score = 44.0 bits (102), Expect = 0.037, Method: Composition-based stats. Identities = 6/47 (12%), Positives = 13/47 (27%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + +R + D + + L RE L + + Sbjct: 9 LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDW 55 >gi|253700800|ref|YP_003021989.1| class I peptide chain release factor [Geobacter sp. M21] gi|251775650|gb|ACT18231.1| Class I peptide chain release factor [Geobacter sp. M21] Length = 105 Score = 44.0 bits (102), Expect = 0.037, Method: Composition-based stats. Identities = 38/85 (44%), Positives = 52/85 (61%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 +EI + D +++ YRASG GGQH NTTDSAVRI H+PTGVV Q + RSQ +N+ +A L Sbjct: 1 MEIRDVDIKVEFYRASGPGGQHRNTTDSAVRIRHLPTGVVAQASESRSQFENREKAMERL 60 Query: 281 RAKLYELELQKREEIANIGESSKTE 305 L E + ++ +A E Sbjct: 61 AELLRRREQKAKKRVATKVPRRAKE 85 >gi|242214518|ref|XP_002473081.1| predicted protein [Postia placenta Mad-698-R] gi|220727819|gb|EED81727.1| predicted protein [Postia placenta Mad-698-R] Length = 268 Score = 44.0 bits (102), Expect = 0.037, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 56/159 (35%), Gaps = 3/159 (1%) Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205 + F L I + E G + + + Sbjct: 85 DPESFDRFKLNITEHTELGSNDTIRDPQPVGSPHRNTHLARPILISSADAAKETPSTQVP 144 Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 + + E+ E D R SG GGQ +N T++ V++ H PTG+ V CQ+ Sbjct: 145 RYYSQLKKAHKQRVVPELKEEDLEEAFVRGSGPGGQSINKTENNVQLLHKPTGLRVSCQE 204 Query: 266 ERSQHKNKAQAWNMLRAKLYELE---LQKREEIANIGES 301 RS +N+ A +L KL L L K+E + + Sbjct: 205 TRSLSQNRKLARRILLGKLDALYNPGLSKQEVKKALQQE 243 >gi|197927088|ref|NP_001102535.2| hypothetical protein LOC498179 [Rattus norvegicus] gi|195539878|gb|AAI68187.1| RGD1563482 protein [Rattus norvegicus] Length = 181 Score = 44.0 bits (102), Expect = 0.038, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 44/80 (55%) Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 + +++ V D + ++ES+ + G GGQ N T + V + H+P+G+VV+C Sbjct: 37 AATAMQVAGKKDYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCH 96 Query: 265 QERSQHKNKAQAWNMLRAKL 284 Q RS +N+ A +L+ K+ Sbjct: 97 QTRSVDQNRKMARKILQEKV 116 >gi|74180243|dbj|BAE24439.1| unnamed protein product [Mus musculus] Length = 152 Score = 44.0 bits (102), Expect = 0.039, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 44/80 (55%) Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 + S++ V D + ++ES+ + G GGQ N T + V + H+P+G+VV+C Sbjct: 40 AASTVQVAGRKDYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCH 99 Query: 265 QERSQHKNKAQAWNMLRAKL 284 Q RS +N+ A +L+ K+ Sbjct: 100 QTRSVDQNRKIARKVLQEKV 119 >gi|156064005|ref|XP_001597924.1| hypothetical protein SS1G_00010 [Sclerotinia sclerotiorum 1980] gi|154690872|gb|EDN90610.1| hypothetical protein SS1G_00010 [Sclerotinia sclerotiorum 1980 UF-70] Length = 201 Score = 43.6 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 1/100 (1%) Query: 194 SPYDSNSRRHTSFS-SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 + +S+S S + ++ I E++ SG GGQ +N T SAV++ Sbjct: 29 NVVNSSSIIKRSICSTTTLWKKKMPDRPAPIDEAEFTEVFLHGSGPGGQKINKTSSAVQL 88 Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 HIPTG+V++ Q RS+ +N+ A ML ++ LE K Sbjct: 89 KHIPTGMVLKVQATRSRTQNRKIARQMLAERVELLEKGKE 128 >gi|197118419|ref|YP_002138846.1| hydrolase [Geobacter bemidjiensis Bem] gi|197087779|gb|ACH39050.1| hydrolase, putative [Geobacter bemidjiensis Bem] Length = 105 Score = 43.6 bits (101), Expect = 0.040, Method: Composition-based stats. Identities = 38/85 (44%), Positives = 52/85 (61%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 +EI + D +++ YRASG GGQH NTTDSAVRI H+PTGVV Q + RSQ +N+ +A L Sbjct: 1 MEIRDVDIKVEFYRASGPGGQHRNTTDSAVRIRHLPTGVVAQASESRSQFENREKAMERL 60 Query: 281 RAKLYELELQKREEIANIGESSKTE 305 L E + ++ +A E Sbjct: 61 AELLRRREQKAKKRVATKVPRRAKE 85 >gi|312370878|gb|EFR19185.1| hypothetical protein AND_22936 [Anopheles darlingi] Length = 225 Score = 43.6 bits (101), Expect = 0.042, Method: Composition-based stats. Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 6/130 (4%) Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE----ISESDCRIDTYRA 235 + + I+ S + + + + + SI+ + E D R Sbjct: 67 CSRYASCLLLWPTIAVRASTATTTITNAYSGGWRMFSKSIDNSRVPVLQEDDLEESFVRG 126 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE--LQKRE 293 SG GGQ V T++ V +TH PTG+VVQC RS +N+ A +L KL +L Q E Sbjct: 127 SGPGGQSVAKTNNKVVLTHKPTGLVVQCHTSRSLFENRRIARQLLVTKLDQLINGEQSVE 186 Query: 294 EIANIGESSK 303 + K Sbjct: 187 AQRQRLDQRK 196 >gi|169597527|ref|XP_001792187.1| hypothetical protein SNOG_01549 [Phaeosphaeria nodorum SN15] gi|160707538|gb|EAT91198.2| hypothetical protein SNOG_01549 [Phaeosphaeria nodorum SN15] Length = 236 Score = 43.6 bits (101), Expect = 0.043, Method: Composition-based stats. Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 2/90 (2%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 + + +SD SG GGQ +N T SAV++ HIPTG+VV+ Q RS+ N+ A Sbjct: 36 PPRVPLPDSDIIEKFLHGSGPGGQKINKTSSAVQLKHIPTGIVVKYQDTRSRTVNRKMAR 95 Query: 278 NMLRAKLYELEL--QKREEIANIGESSKTE 305 +L+ ++ E EL R ++ +S K + Sbjct: 96 KILQERIEEAELGDDARTKVKQREKSRKKQ 125 >gi|61886963|ref|XP_584238.1| PREDICTED: chromosome 12 open reading frame 65 ortholog [Bos taurus] gi|297484729|ref|XP_002694521.1| PREDICTED: chromosome 12 open reading frame 65 ortholog [Bos taurus] gi|296478551|gb|DAA20666.1| chromosome 12 open reading frame 65 ortholog [Bos taurus] Length = 172 Score = 43.6 bits (101), Expect = 0.043, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 8/89 (8%) Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 + E + + G GGQ N T + V + H+P+G+VV+C Q RS +N+ A +L+ Sbjct: 55 LDERELEEQFVKGHGPGGQATNKTSNCVVLRHVPSGIVVKCHQTRSVDQNRKLARRILQE 114 Query: 283 KLYELE--------LQKREEIANIGESSK 303 K+ +KRE E K Sbjct: 115 KVDVFYNGENSLVCREKREAEKRKQERKK 143 >gi|126324306|ref|XP_001375022.1| PREDICTED: similar to RIKEN cDNA 2810006K23 gene [Monodelphis domestica] Length = 212 Score = 43.6 bits (101), Expect = 0.044, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 2/100 (2%) Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + P R V D + ++E D + G GGQ N T + Sbjct: 63 WLWKKPVFLFPRM--GACGPQVTGKTDAHNLLPLNERDLEEQFVKGHGPGGQATNKTSNC 120 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289 V + HIP+G+VV+C Q RS +N+ A +L+ K+ Sbjct: 121 VVLKHIPSGIVVKCHQTRSVDQNRKLAREILQGKVDLFYR 160 >gi|229917818|ref|YP_002886464.1| ABC transporter [Exiguobacterium sp. AT1b] gi|229469247|gb|ACQ71019.1| ABC transporter related [Exiguobacterium sp. AT1b] Length = 633 Score = 43.6 bits (101), Expect = 0.046, Method: Composition-based stats. Identities = 7/66 (10%), Positives = 25/66 (37%), Gaps = 3/66 (4%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER-QHLDNAISFIK 60 ++ +++ + + RL + +P ++ + A+ L E ++ + Sbjct: 569 RIKQRIEEIEQA--IEQHENRLDEIEQLLCEPDVFNDFARAQELSTESDAAKESITALYA 626 Query: 61 EIQDRL 66 E ++ Sbjct: 627 EWEELH 632 >gi|171694017|ref|XP_001911933.1| hypothetical protein [Podospora anserina S mat+] gi|170946957|emb|CAP73761.1| unnamed protein product [Podospora anserina S mat+] Length = 187 Score = 43.6 bits (101), Expect = 0.046, Method: Composition-based stats. Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 13/101 (12%) Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 S ES+ + SG GGQ +N T+SAV+I H+PT +V++CQ RS+ +N+ Sbjct: 1 MPSRPKPPPESEIEESFLKGSGPGGQKINKTNSAVQIKHLPTNIVIKCQATRSRSQNRKI 60 Query: 276 AWNMLRAKLYELE-------------LQKREEIANIGESSK 303 A ++L +L EL +KR + A K Sbjct: 61 ARDILAERLDELYNGSQSRVAIVGSVKKKRADSAAKKSRRK 101 >gi|322801028|gb|EFZ21809.1| hypothetical protein SINV_15156 [Solenopsis invicta] Length = 220 Score = 43.6 bits (101), Expect = 0.046, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 50/93 (53%) Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 +D S +++E+D R SG GGQ N T++AV + H PTG +V+C + RSQ N Sbjct: 103 HYLDYSNVPKLNEADLEEQFIRGSGPGGQATNKTNNAVLLKHKPTGFIVKCHETRSQWDN 162 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTE 305 K +A +L KL L ++R A I + + Sbjct: 163 KKRAREILITKLDNLLNKERSIEAQIRALEEKQ 195 >gi|194042870|ref|XP_001928322.1| PREDICTED: probable peptide chain release factor C12orf65, mitochondrial-like [Sus scrofa] Length = 202 Score = 43.6 bits (101), Expect = 0.048, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 8/89 (8%) Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 + E + + G GGQ N T + V + HIP+G+VV+C Q RS +N+ A +L+ Sbjct: 55 LDERELEEQFVKGHGPGGQATNKTSNCVVLRHIPSGIVVKCHQTRSVDQNRKLARRILQE 114 Query: 283 KLYE--------LELQKREEIANIGESSK 303 K+ + +KRE E K Sbjct: 115 KVDVFYNGENSPVYKEKREAEKRKQERKK 143 >gi|95930653|ref|ZP_01313387.1| ABC transporter related [Desulfuromonas acetoxidans DSM 684] gi|95133305|gb|EAT14970.1| ABC transporter related [Desulfuromonas acetoxidans DSM 684] Length = 646 Score = 43.6 bits (101), Expect = 0.051, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 3/71 (4%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKE 61 L +QL L D + A + L + DP L+Q+ + L + + A+ ++ Sbjct: 576 LEKQLQQLEA--DIETAETHQADLEQQLADPELYQDQAQFSQLSDQHRDQAEALEGMYEQ 633 Query: 62 IQDRLCDNLIL 72 + D L Sbjct: 634 WEKLQHDLTTL 644 >gi|110224561|emb|CAJ98778.1| peptide release factor protein 2 [Francisella tularensis subsp. tularensis] gi|110224571|emb|CAJ98783.1| peptide release factor protein 2 [Francisella tularensis subsp. tularensis ATCC 6223] gi|110224573|emb|CAJ98784.1| peptide release factor protein 2 [Francisella tularensis subsp. tularensis] gi|110224575|emb|CAJ98785.1| peptide release factor protein 2 [Francisella novicida] Length = 101 Score = 43.6 bits (101), Expect = 0.051, Method: Composition-based stats. Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 2/103 (1%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 D +W N A+ L +++ L+N + + I + L LLEL E++ Sbjct: 1 DGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELGEEDESLMQEIAKDTQ 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 ++ E +F + SG+ D+N+A+L++ +G+GGTE+QDWA Sbjct: 61 NVASEI--EKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWA 101 >gi|110224557|emb|CAJ98776.1| peptide release factor protein 2 [Francisella tularensis subsp. mediasiatica] gi|110224559|emb|CAJ98777.1| peptide release factor protein 2 [Francisella novicida] gi|110224563|emb|CAJ98779.1| peptide release factor protein 2 [Francisella novicida] gi|110224587|emb|CAJ98791.1| peptide release factor protein 2 [Francisella tularensis subsp. mediasiatica] Length = 101 Score = 43.6 bits (101), Expect = 0.051, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 2/103 (1%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 D +W N A+ L +++ L+N + + I + L LLELA E++ Sbjct: 1 DGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELAEEDESLMQEIAKDTQ 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 ++ E +F + SG+ D+N+A+L++ +G+GGTE+QDWA Sbjct: 61 NVASEI--EKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWA 101 >gi|77919634|ref|YP_357449.1| ABC transporter ATPase [Pelobacter carbinolicus DSM 2380] gi|77545717|gb|ABA89279.1| ABC-type transport system, ATPase component [Pelobacter carbinolicus DSM 2380] Length = 642 Score = 43.3 bits (100), Expect = 0.052, Method: Composition-based stats. Identities = 8/54 (14%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS-FIKEIQDRLCD 68 + + L+ L + DP L+++ ++ + E Q L + + + + + Sbjct: 586 IETGEENLAQLEARLADPGLYEDPERSRQIAAEYQSLQDEVGVLYQRWESLQLE 639 >gi|197927090|ref|NP_001128189.1| probable peptide chain release factor C12orf65 homolog, mitochondrial isoform a [Mus musculus] gi|81895172|sp|Q80VP5|CL065_MOUSE RecName: Full=Probable peptide chain release factor C12orf65 homolog, mitochondrial; Flags: Precursor gi|28422444|gb|AAH46909.1| RIKEN cDNA 2810006K23 gene [Mus musculus] gi|148687649|gb|EDL19596.1| RIKEN cDNA 2810006K23, isoform CRA_b [Mus musculus] Length = 184 Score = 43.3 bits (100), Expect = 0.054, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 44/80 (55%) Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 + S++ V D + ++ES+ + G GGQ N T + V + H+P+G+VV+C Sbjct: 40 AASTVQVAGRKDYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCH 99 Query: 265 QERSQHKNKAQAWNMLRAKL 284 Q RS +N+ A +L+ K+ Sbjct: 100 QTRSVDQNRKIARKVLQEKV 119 >gi|219111103|ref|XP_002177303.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217411838|gb|EEC51766.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 491 Score = 43.3 bits (100), Expect = 0.054, Method: Composition-based stats. Identities = 28/72 (38%), Positives = 36/72 (50%) Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 E++E D R SG GGQ N T + V + H PT + V+CQ RS +N+ Sbjct: 380 YTARELPELNEDDLTETFVRGSGPGGQKTNKTSNKVALLHGPTQLRVECQDTRSLQQNRK 439 Query: 275 QAWNMLRAKLYE 286 A LRAKL E Sbjct: 440 IARKRLRAKLDE 451 >gi|328955493|ref|YP_004372826.1| ABC transporter related protein [Coriobacterium glomerans PW2] gi|328455817|gb|AEB07011.1| ABC transporter related protein [Coriobacterium glomerans PW2] Length = 675 Score = 43.3 bits (100), Expect = 0.058, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 23/76 (30%), Gaps = 6/76 (7%) Query: 2 KLSRQLNCLGGLF-----DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56 +L+R+L D R L L+++ + + E L I Sbjct: 593 ELNRRLKQRRTRLSTVDADLARKRARYDELMAIMSSEGLYEDQVAFNRALAEYGALKKEI 652 Query: 57 SFI-KEIQDRLCDNLI 71 S + +E D Sbjct: 653 SVLEEEWLDLSAQLEE 668 >gi|110224725|emb|CAJ98860.1| peptide release factor protein 2 [Francisella philomiragia] gi|110224727|emb|CAJ98861.1| peptide release factor protein 2 [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 101 Score = 43.3 bits (100), Expect = 0.058, Method: Composition-based stats. Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 2/103 (1%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 D +W N A+ L R++ L+N + + I + L LLELA E++ Sbjct: 1 DGSIWDNPEYAQNLGRQKVELENVVHNCEYISETLETLTELLELAEEDESLMQEIAKDTQ 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 ++ E +F + SG+ D N+A+L++ +G+GGTE+QDWA Sbjct: 61 DVTAEI--EKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWA 101 >gi|307946753|ref|ZP_07662088.1| GCN20-type ATP-binding cassette protein GCN3 [Roseibium sp. TrichSKD4] gi|307770417|gb|EFO29643.1| GCN20-type ATP-binding cassette protein GCN3 [Roseibium sp. TrichSKD4] Length = 637 Score = 43.3 bits (100), Expect = 0.059, Method: Composition-based stats. Identities = 9/72 (12%), Positives = 26/72 (36%), Gaps = 4/72 (5%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQHLD-NAISFIK 60 L +++ + +++ L+ DP +Q + A +ER + + + + Sbjct: 567 LQQKIKAAEK--EMARLQEKIEKLDEALADPAFFQTDPDRAAKFAKERAYCEKKLVKTEE 624 Query: 61 EIQDRLCDNLIL 72 E + + Sbjct: 625 EWLELSAEFEEA 636 >gi|171914371|ref|ZP_02929841.1| Class I peptide chain release factor [Verrucomicrobium spinosum DSM 4136] Length = 141 Score = 43.3 bits (100), Expect = 0.060, Method: Composition-based stats. Identities = 35/91 (38%), Positives = 49/91 (53%) Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 +++ I E D R +GAGGQ +N T S V +TH+PTG+ V+CQ+ERSQ N+ Sbjct: 16 HQRMLKLGIREEDLEETFIRGTGAGGQKINKTSSTVVLTHVPTGLEVRCQRERSQSLNRV 75 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTE 305 A L +KL E + E N E K + Sbjct: 76 VAREELCSKLEERLAAVKLERRNEVEKKKRQ 106 >gi|315053701|ref|XP_003176225.1| hypothetical protein MGYG_00314 [Arthroderma gypseum CBS 118893] gi|311338071|gb|EFQ97273.1| hypothetical protein MGYG_00314 [Arthroderma gypseum CBS 118893] Length = 192 Score = 43.3 bits (100), Expect = 0.060, Method: Composition-based stats. Identities = 30/81 (37%), Positives = 43/81 (53%) Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 I +S+ + SG GGQ +N T SAV++ HIPT VV+CQ RSQ +N+ Sbjct: 42 QMPPRPTIDDSEITGTYLKGSGPGGQKINKTSSAVQLIHIPTNTVVKCQATRSQSQNRKI 101 Query: 276 AWNMLRAKLYELELQKREEIA 296 A +L K+ LE ++ A Sbjct: 102 AKRILAEKIELLEKGEQSRAA 122 >gi|148264585|ref|YP_001231291.1| class I peptide chain release factor [Geobacter uraniireducens Rf4] gi|146398085|gb|ABQ26718.1| Class I peptide chain release factor [Geobacter uraniireducens Rf4] Length = 108 Score = 43.3 bits (100), Expect = 0.061, Method: Composition-based stats. Identities = 40/80 (50%), Positives = 57/80 (71%) Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 + +EI ESD +I+ YRASG GGQH NTTDSAVRI H+PTG+VVQ + RSQ +N+ A + Sbjct: 1 MAMEIKESDIKIEFYRASGPGGQHRNTTDSAVRIRHLPTGIVVQASESRSQAQNREVAMH 60 Query: 279 MLRAKLYELELQKREEIANI 298 L+ L + E + ++ +A+ Sbjct: 61 RLQEALLKRERKVKKRVASR 80 >gi|139439680|ref|ZP_01773093.1| Hypothetical protein COLAER_02121 [Collinsella aerofaciens ATCC 25986] gi|133775021|gb|EBA38841.1| Hypothetical protein COLAER_02121 [Collinsella aerofaciens ATCC 25986] Length = 678 Score = 43.3 bits (100), Expect = 0.063, Method: Composition-based stats. Identities = 9/70 (12%), Positives = 21/70 (30%), Gaps = 6/70 (8%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI----SF 58 + QL + + D R L L+ + + + E L + Sbjct: 604 VRNQLKKIET--ELDKKRARYDELMELMASEELYADQDKFNAALGEYNGLKQELPKLEDE 661 Query: 59 IKEIQDRLCD 68 E+ ++ + Sbjct: 662 WLELSTQIEE 671 >gi|110224567|emb|CAJ98781.1| peptide release factor protein 2 [Francisella tularensis subsp. holarctica] gi|110224577|emb|CAJ98786.1| peptide release factor protein 2 [Francisella tularensis subsp. holarctica] gi|110224579|emb|CAJ98787.1| peptide release factor protein 2 [Francisella tularensis subsp. holarctica] gi|110224581|emb|CAJ98788.1| peptide release factor protein 2 [Francisella tularensis subsp. holarctica] gi|110224583|emb|CAJ98789.1| peptide release factor protein 2 [Francisella tularensis subsp. holarctica] gi|110224585|emb|CAJ98790.1| peptide release factor protein 2 [Francisella tularensis subsp. holarctica] Length = 101 Score = 43.3 bits (100), Expect = 0.063, Method: Composition-based stats. Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 2/103 (1%) Query: 32 DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91 D +W N A+ L +++ L+N + + I + L LLEL E++ Sbjct: 1 DGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELGEEDESLMQEIAKDTQ 60 Query: 92 LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 ++ E +F + SG+ D+N A+L++ +G+GGTE+QDWA Sbjct: 61 NVASEI--EKLEFRRMFSGKMDANKAFLDIQSGSGGTEAQDWA 101 >gi|168701291|ref|ZP_02733568.1| peptide chain release factor 2 [Gemmata obscuriglobus UQM 2246] Length = 185 Score = 43.3 bits (100), Expect = 0.063, Method: Composition-based stats. Identities = 32/68 (47%), Positives = 43/68 (63%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 + + C +DTYRASG GGQ N T SAVR+ H PTG++V ++ RSQH+NKA+A Sbjct: 18 HLTEDQLLRQCEVDTYRASGPGGQKRNKTSSAVRLRHAPTGLIVIAEESRSQHENKAKAL 77 Query: 278 NMLRAKLY 285 L L+ Sbjct: 78 KRLWHALF 85 >gi|121703728|ref|XP_001270128.1| peptidyl-tRNA hydrolase domain protein [Aspergillus clavatus NRRL 1] gi|119398272|gb|EAW08702.1| peptidyl-tRNA hydrolase domain protein [Aspergillus clavatus NRRL 1] Length = 203 Score = 43.3 bits (100), Expect = 0.067, Method: Composition-based stats. Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 2/91 (2%) Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P ++I+++D I + +G GGQ +N T+SAV++ H PTG+VV+ Q RS+ +N Sbjct: 36 PEKQLPPRLKINDADLTISYLKGTGPGGQKINKTNSAVQLIHKPTGLVVKSQATRSRSQN 95 Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSK 303 + A +L K+ ELQK +E ++ + Sbjct: 96 EKIARQILADKVE--ELQKGDESRRAIKAER 124 >gi|302024126|ref|ZP_07249337.1| peptide chain release factor 2 [Streptococcus suis 05HAS68] Length = 50 Score = 43.3 bits (100), Expect = 0.067, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 20/46 (43%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 +P W + + A+ +E L N ++ D ++ ILL+ Sbjct: 1 MTEPDFWNDNLAAQKTSQELNELKNTYGNFHQMLDLYDESEILLDF 46 >gi|108758265|ref|YP_629628.1| peptidyl-tRNA hydrolase domain-containing protein [Myxococcus xanthus DK 1622] gi|108462145|gb|ABF87330.1| peptidyl-tRNA hydrolase domain protein [Myxococcus xanthus DK 1622] Length = 129 Score = 43.3 bits (100), Expect = 0.067, Method: Composition-based stats. Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 23/102 (22%) Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL--- 284 C +D + ASG GGQH NTT S VR+TH PT + V + RSQ +NK A LR L Sbjct: 30 CEVDYFIASGPGGQHRNTTASGVRLTHAPTELSVSATERRSQVQNKGVALERLREGLKVL 89 Query: 285 ------------------YELELQKREEIANIGESSKTEIGW 308 LE +KR +SK+ GW Sbjct: 90 TFVPKVRRATKPTAGSKRRRLEGKKRTSEKKALRNSKS--GW 129 >gi|255556733|ref|XP_002519400.1| peptide chain release factor, putative [Ricinus communis] gi|223541467|gb|EEF43017.1| peptide chain release factor, putative [Ricinus communis] Length = 185 Score = 42.9 bits (99), Expect = 0.069, Method: Composition-based stats. Identities = 28/49 (57%), Positives = 37/49 (75%) Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 C +DTY+ASG GGQH N +SAVRI H+PTG++ Q ++RSQHKN+ Sbjct: 1 MRQCEMDTYKASGPGGQHRNKRESAVRIKHLPTGIISQAVEDRSQHKNR 49 >gi|307197489|gb|EFN78723.1| Uncharacterized protein C12orf65-like protein [Harpegnathos saltator] Length = 165 Score = 42.9 bits (99), Expect = 0.070, Method: Composition-based stats. Identities = 31/92 (33%), Positives = 49/92 (53%) Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +D S ++ E+D + R SG GGQ N T++AV + H PTG+VV+C + RS N+ Sbjct: 49 YLDYSNLPKLEEADLKEQFVRGSGPGGQATNKTNNAVVLKHKPTGIVVKCHETRSLWDNQ 108 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTE 305 +A +L KL L ++ A I + + Sbjct: 109 KRARELLVTKLDNLLNKEHSIEAQIRAIQQKQ 140 >gi|118792472|ref|XP_320337.3| AGAP012195-PA [Anopheles gambiae str. PEST] gi|116116915|gb|EAA00473.4| AGAP012195-PA [Anopheles gambiae str. PEST] Length = 151 Score = 42.9 bits (99), Expect = 0.072, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 9/97 (9%) Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 D S + + D R SG GGQ V T++ V +TH PTG+VVQC RS +N+ + Sbjct: 33 DHSRLPVLRDEDLEESFVRGSGPGGQAVAKTNNKVVLTHKPTGIVVQCHTTRSLFENRRE 92 Query: 276 AWNMLRAKLYEL---------ELQKREEIANIGESSK 303 A ML KL +L +LQ+ E + + Sbjct: 93 ARKMLIGKLDQLYNGDQSVEAQLQRIEAKKQTETARR 129 >gi|150004575|ref|YP_001299319.1| ABC transporter ATP-binding protein [Bacteroides vulgatus ATCC 8482] gi|149932999|gb|ABR39697.1| ABC transporter ATP-binding protein [Bacteroides vulgatus ATCC 8482] Length = 647 Score = 42.9 bits (99), Expect = 0.076, Method: Composition-based stats. Identities = 8/74 (10%), Positives = 28/74 (37%), Gaps = 5/74 (6%) Query: 2 KLSRQLNCLGGLF-DWDNAVQRLS----FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56 +L++++ L D + +++L + P ++ + + ++ LD + Sbjct: 572 ELNKKIRKLEKRIADCEQKIEKLETEIGEVEADMATPEGASDMALYEKHQKLKKDLDQTV 631 Query: 57 SFIKEIQDRLCDNL 70 + + L + Sbjct: 632 EEWETVSMELEEMQ 645 >gi|294776766|ref|ZP_06742230.1| ABC transporter, ATP-binding protein [Bacteroides vulgatus PC510] gi|294449421|gb|EFG17957.1| ABC transporter, ATP-binding protein [Bacteroides vulgatus PC510] Length = 647 Score = 42.9 bits (99), Expect = 0.077, Method: Composition-based stats. Identities = 8/74 (10%), Positives = 28/74 (37%), Gaps = 5/74 (6%) Query: 2 KLSRQLNCLGGLF-DWDNAVQRLS----FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56 +L++++ L D + +++L + P ++ + + ++ LD + Sbjct: 572 ELNKKIRKLEKRIADCEQKIEKLETEIGEVEADMATPEGASDMALYEKHQKLKKDLDQTV 631 Query: 57 SFIKEIQDRLCDNL 70 + + L + Sbjct: 632 EEWETVSMELEEMQ 645 >gi|327309086|ref|XP_003239234.1| peptidyl-tRNA hydrolase [Trichophyton rubrum CBS 118892] gi|326459490|gb|EGD84943.1| peptidyl-tRNA hydrolase [Trichophyton rubrum CBS 118892] Length = 190 Score = 42.9 bits (99), Expect = 0.079, Method: Composition-based stats. Identities = 30/81 (37%), Positives = 43/81 (53%) Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 I +S+ + SG GGQ +N T SAV++ HIPT VV+CQ RSQ +N+ Sbjct: 42 QMPPRPTIDDSEITGTYLKGSGPGGQKINKTSSAVQLIHIPTNTVVKCQATRSQSQNRKI 101 Query: 276 AWNMLRAKLYELELQKREEIA 296 A +L K+ LE ++ A Sbjct: 102 AKRILAEKIELLEKGEQSRAA 122 >gi|196010673|ref|XP_002115201.1| hypothetical protein TRIADDRAFT_28629 [Trichoplax adhaerens] gi|190582584|gb|EDV22657.1| hypothetical protein TRIADDRAFT_28629 [Trichoplax adhaerens] Length = 125 Score = 42.9 bits (99), Expect = 0.081, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 39/71 (54%) Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 + + +I D + SG GGQ VN + + V + H PTG+V++C Q RSQ+ N+ Sbjct: 12 YTNYYAQSQIPTKDIEESFVKGSGPGGQKVNKSSNCVILKHKPTGIVIKCHQSRSQYHNR 71 Query: 274 AQAWNMLRAKL 284 A +L+ K+ Sbjct: 72 IIARQLLKDKI 82 >gi|145550427|ref|XP_001460892.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124428723|emb|CAK93495.1| unnamed protein product [Paramecium tetraurelia] Length = 723 Score = 42.9 bits (99), Expect = 0.082, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 43/85 (50%) Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 ++ I + + +EI ++D + G GGQ +N T + V++TH PTG+ ++ Sbjct: 593 SKFYAFISIKEMKMSRKPVEIHQTDLEWKFIKGGGPGGQAINKTSNCVQLTHTPTGIQIK 652 Query: 263 CQQERSQHKNKAQAWNMLRAKLYEL 287 CQ+ R NK A L+ KL E Sbjct: 653 CQKSRDLETNKNYAIKALKEKLDEQ 677 >gi|118396926|ref|XP_001030799.1| Peptidyl-tRNA hydrolase domain containing protein [Tetrahymena thermophila] gi|89285114|gb|EAR83136.1| Peptidyl-tRNA hydrolase domain containing protein [Tetrahymena thermophila SB210] Length = 636 Score = 42.9 bits (99), Expect = 0.082, Method: Composition-based stats. Identities = 26/75 (34%), Positives = 34/75 (45%) Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272 P + I+ +I E D + SG GGQ VN T + + H PTG+ V+ R KN Sbjct: 512 PQKKERIKPQIDEKDLEWKFVKGSGPGGQSVNKTSNNAVLIHKPTGIQVRSHASRELDKN 571 Query: 273 KAQAWNMLRAKLYEL 287 K L KL L Sbjct: 572 KQYCMKQLSEKLDVL 586 >gi|115756417|ref|XP_001202254.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] gi|115938185|ref|XP_798467.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 156 Score = 42.5 bits (98), Expect = 0.089, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 49/100 (49%) Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R ++ ++ S ++ E + R SG GGQ N T + V + HIPTG+V Sbjct: 10 RCKSTTTTRDKLRARIRSKLPDLKEEELEEQFVRGSGPGGQATNKTSNCVVLKHIPTGLV 69 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300 V+C Q RSQ +N+ A +++ +L + + I+ + Sbjct: 70 VKCHQTRSQSENQKIARLLMKERLDQHLHADQSAISQYQQ 109 >gi|260785096|ref|XP_002587599.1| hypothetical protein BRAFLDRAFT_95745 [Branchiostoma floridae] gi|229272748|gb|EEN43610.1| hypothetical protein BRAFLDRAFT_95745 [Branchiostoma floridae] Length = 177 Score = 42.5 bits (98), Expect = 0.090, Method: Composition-based stats. Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 8/81 (9%) Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY------ 285 R G GGQ N T++ V + H+PTG+VV+C Q RS +N+ A +R KL Sbjct: 75 FQRGWGPGGQATNKTNNCVLLKHVPTGIVVKCHQTRSLDENRKIARQHMREKLDLHLKGQ 134 Query: 286 --ELELQKREEIANIGESSKT 304 EL +KRE E K Sbjct: 135 ESELVKEKRELAIKKREKRKK 155 >gi|296121082|ref|YP_003628860.1| class I peptide chain release factor [Planctomyces limnophilus DSM 3776] gi|296013422|gb|ADG66661.1| Class I peptide chain release factor [Planctomyces limnophilus DSM 3776] Length = 203 Score = 42.5 bits (98), Expect = 0.091, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 3/115 (2%) Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 D ++ H S W +PV+ ++ S+C+ + SG GGQH N ++ V Sbjct: 19 EPVEIDPQTQPHASQIQGWKHPVLLSHEQL---LSECKARRQKTSGPGGQHRNKVETGVF 75 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306 + H PTGV Q + RSQ +N+++A LR +L ++ + K+ + Sbjct: 76 LKHTPTGVEAQATERRSQAENQSKALKRLRLQLALEIRSQKSALEAPSPLWKSRV 130 >gi|170094760|ref|XP_001878601.1| predicted protein [Laccaria bicolor S238N-H82] gi|164647055|gb|EDR11300.1| predicted protein [Laccaria bicolor S238N-H82] Length = 294 Score = 42.5 bits (98), Expect = 0.091, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 36/73 (49%) Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 E+ E D R SG GGQ +N T++ V++ H PTG+ V CQ RS N+ Sbjct: 178 HLQRSIPELREEDLEETFVRGSGPGGQSINKTENNVQLLHKPTGLRVSCQDTRSLSLNRK 237 Query: 275 QAWNMLRAKLYEL 287 A L KL +L Sbjct: 238 LARRWLLEKLDKL 250 >gi|289807125|ref|ZP_06537754.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 145 Score = 42.5 bits (98), Expect = 0.091, Method: Composition-based stats. Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 5/107 (4%) Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229 + + G A + + G + SPY + R + I S + I + R Sbjct: 43 VSLDGEKAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGI-----GRFSADEHIQSDEIR 97 Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK Sbjct: 98 FETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLG 144 >gi|239906239|ref|YP_002952979.1| putative ABC transporter ATP-binding protein [Desulfovibrio magneticus RS-1] gi|239796104|dbj|BAH75093.1| putative ABC transporter ATP-binding protein [Desulfovibrio magneticus RS-1] Length = 666 Score = 42.5 bits (98), Expect = 0.098, Method: Composition-based stats. Identities = 7/61 (11%), Positives = 23/61 (37%), Gaps = 4/61 (6%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL----DNAISFIKEIQDRLCDNL 70 + + + + S + DP + L +E L ++ ++ + +++ + D Sbjct: 597 ELETLLAKQSEVEAVMADPETYAQRELFSKLSKEYSDLSREAEDLLARMAVMEEEIADLE 656 Query: 71 I 71 Sbjct: 657 A 657 >gi|170049046|ref|XP_001853980.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167870988|gb|EDS34371.1| conserved hypothetical protein [Culex quinquefasciatus] Length = 142 Score = 42.5 bits (98), Expect = 0.099, Method: Composition-based stats. Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 2/85 (2%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 + + D R SG GGQ V T++ V +TH PTG+V+QC RS KN+ +A +L Sbjct: 31 PVLRDEDLEEAFVRGSGPGGQSVAKTNNKVVLTHKPTGIVIQCHSSRSLFKNREEARRLL 90 Query: 281 RAKLYELE--LQKREEIANIGESSK 303 KL ELE Q E E+ K Sbjct: 91 ILKLDELENGDQSVEAQRQKIEAKK 115 >gi|224477038|ref|YP_002634644.1| putative ABC transporter ATP-binding protein [Staphylococcus carnosus subsp. carnosus TM300] gi|222421645|emb|CAL28459.1| putative ABC transporter ATP-binding protein [Staphylococcus carnosus subsp. carnosus TM300] Length = 642 Score = 42.5 bits (98), Expect = 0.10, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 33/69 (47%), Gaps = 6/69 (8%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQ----HLDNAIS 57 ++ RQ+ + + Q+++ +N + P ++ + +A L E+ L+ + Sbjct: 575 QIERQIENCEA--EIEACEQKIADINEQLTQPEIFSDPEKAGELADEKNNTEQQLEQIMI 632 Query: 58 FIKEIQDRL 66 +E+Q+++ Sbjct: 633 RWEELQEKI 641 >gi|148266078|ref|YP_001232784.1| class I peptide chain release factor [Geobacter uraniireducens Rf4] gi|146399578|gb|ABQ28211.1| Class I peptide chain release factor [Geobacter uraniireducens Rf4] Length = 127 Score = 42.5 bits (98), Expect = 0.10, Method: Composition-based stats. Identities = 27/74 (36%), Positives = 37/74 (50%) Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 + + E D R+SG GGQHVN T + V + H PTG+ V+C +ERSQ N+ Sbjct: 15 RQKMESLGVREEDIDEQFIRSSGKGGQHVNKTSTCVYLKHKPTGIEVKCMRERSQSLNRF 74 Query: 275 QAWNMLRAKLYELE 288 A L K+ Sbjct: 75 LARRELLEKIEARA 88 >gi|317405183|gb|EFV85524.1| ABC transporter ATP-binding protein [Achromobacter xylosoxidans C54] Length = 644 Score = 42.5 bits (98), Expect = 0.10, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 30/84 (35%), Gaps = 15/84 (17%) Query: 2 KLSRQLNCLGGLFD---------WDNAVQRLSFLNTKTEDPHLWQNVIEA--KMLMRER- 49 + ++L+ L + + +L L+ DP L+ + A + +M E Sbjct: 557 EQRQRLSALRKPLEAKLAKVEAEMEKLRAKLQALDAVIADPDLYSDARRAERQKVMAEHG 616 Query: 50 ---QHLDNAISFIKEIQDRLCDNL 70 + ++ E+Q L + Sbjct: 617 EHGKRMETLEEQWLELQGSLEEIE 640 >gi|254883053|ref|ZP_05255763.1| ABC transporter ATP-binding protein [Bacteroides sp. 4_3_47FAA] gi|319643572|ref|ZP_07998192.1| ABC transporter ATP-binding protein [Bacteroides sp. 3_1_40A] gi|254835846|gb|EET16155.1| ABC transporter ATP-binding protein [Bacteroides sp. 4_3_47FAA] gi|317384741|gb|EFV65700.1| ABC transporter ATP-binding protein [Bacteroides sp. 3_1_40A] Length = 647 Score = 42.5 bits (98), Expect = 0.10, Method: Composition-based stats. Identities = 8/74 (10%), Positives = 28/74 (37%), Gaps = 5/74 (6%) Query: 2 KLSRQLNCLGGLF-DWDNAVQRLS----FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56 +L++++ L D + +++L + P ++ + + ++ LD + Sbjct: 572 ELNKKIRKLEKRVADCEQKIEKLETEIGEVEADMATPEGASDMALYEKHQKLKKDLDQTV 631 Query: 57 SFIKEIQDRLCDNL 70 + + L + Sbjct: 632 EEWETVSMELEEMQ 645 >gi|319941613|ref|ZP_08015937.1| hypothetical protein HMPREF9464_01156 [Sutterella wadsworthensis 3_1_45B] gi|319804843|gb|EFW01697.1| hypothetical protein HMPREF9464_01156 [Sutterella wadsworthensis 3_1_45B] Length = 646 Score = 42.5 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 30/73 (41%), Gaps = 4/73 (5%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ--NVIEAKMLMRERQHLDNAISFIK 60 L ++L + + + ++L L+T+ DP + + + +RE L + ++ Sbjct: 570 LKKELEKVER--EMNALSEKLKALDTQLADPAFYNGADQGKVAQTLREHGELAPKVEALE 627 Query: 61 EIQDRLCDNLILL 73 L + + L Sbjct: 628 MHWLELSEKIEAL 640 >gi|242781170|ref|XP_002479747.1| peptidyl-tRNA hydrolase domain protein [Talaromyces stipitatus ATCC 10500] gi|218719894|gb|EED19313.1| peptidyl-tRNA hydrolase domain protein [Talaromyces stipitatus ATCC 10500] Length = 174 Score = 42.5 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 1/94 (1%) Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 ++ + D + +G GGQ +N T+SAV++ H PTG+VV+ Q RS+ +N+ Sbjct: 36 QLPPRPKLDDKDITGSYLKGTGPGGQKINKTNSAVQLIHKPTGIVVKSQATRSRSQNQKI 95 Query: 276 AWNMLRAKLYELEL-QKREEIANIGESSKTEIGW 308 A +L AK+ ELE ++ E K + Sbjct: 96 AREILAAKVEELEKGEQSREAIKNALKRKRKASS 129 >gi|157131147|ref|XP_001662139.1| hypothetical protein AaeL_AAEL012009 [Aedes aegypti] gi|157137107|ref|XP_001663890.1| hypothetical protein AaeL_AAEL013711 [Aedes aegypti] gi|108869799|gb|EAT34024.1| conserved hypothetical protein [Aedes aegypti] gi|108871632|gb|EAT35857.1| conserved hypothetical protein [Aedes aegypti] Length = 142 Score = 42.5 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 31/85 (36%), Positives = 44/85 (51%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 + + D R SG GGQ V T++ V +TH PTG+V+QC RS KN+ +A +L Sbjct: 31 PALRDDDLEETFVRGSGPGGQAVAKTNNKVVLTHKPTGIVIQCHSSRSLFKNREEARRLL 90 Query: 281 RAKLYELELQKREEIANIGESSKTE 305 AKL ELE + A + + Sbjct: 91 VAKLDELENGDQSVEAQQRRIDQKK 115 >gi|169854029|ref|XP_001833692.1| hypothetical protein CC1G_03909 [Coprinopsis cinerea okayama7#130] gi|116505342|gb|EAU88237.1| hypothetical protein CC1G_03909 [Coprinopsis cinerea okayama7#130] Length = 264 Score = 42.5 bits (98), Expect = 0.11, Method: Composition-based stats. Identities = 28/74 (37%), Positives = 39/74 (52%) Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 I E+ E D R SG GGQ +N T++ V++ H PTG+ V CQ+ RS +N+ Sbjct: 150 HTQRIVPELKEEDLEESFVRGSGPGGQSINKTENNVQLLHKPTGIRVSCQETRSLSQNRK 209 Query: 275 QAWNMLRAKLYELE 288 A L KL +L Sbjct: 210 IARKRLLEKLDKLA 223 >gi|187607772|ref|NP_001119948.1| hypothetical protein LOC100004874 [Danio rerio] gi|162416112|sp|A5WUX7|CL065_DANRE RecName: Full=Probable peptide chain release factor C12orf65 homolog, mitochondrial; Flags: Precursor gi|148726035|emb|CAN87842.1| novel protein [Danio rerio] Length = 156 Score = 42.1 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 9/109 (8%) Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 S + + E + R SG GGQ N T + V + HIP+G+VV+C Sbjct: 24 WPSVLPAAGKKYQIELPVVHEEELEEQFVRGSGPGGQATNKTSNCVVLRHIPSGIVVKCH 83 Query: 265 QERSQHKNKAQAWNMLRAKL---------YELELQKREEIANIGESSKT 304 + RS N+ +A +LR KL L+++K + K Sbjct: 84 ETRSVDLNRKRAREILREKLEVAYKGEESELLKMKKESMQKKQDKRRKV 132 >gi|222053782|ref|YP_002536144.1| Class I peptide chain release factor [Geobacter sp. FRC-32] gi|221563071|gb|ACM19043.1| Class I peptide chain release factor [Geobacter sp. FRC-32] Length = 139 Score = 42.1 bits (97), Expect = 0.12, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 36/70 (51%) Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 + + E D R+SG GGQHVN T + V + H PTG+ V+C ERSQ N+ Sbjct: 15 RQKMDLLGVREEDLDEQFIRSSGKGGQHVNKTSTCVYLRHRPTGIEVKCMAERSQSLNRF 74 Query: 275 QAWNMLRAKL 284 A L K+ Sbjct: 75 LARRQLLEKI 84 >gi|207110569|ref|ZP_03244731.1| peptide chain release factor 1 [Helicobacter pylori HPKX_438_CA4C1] Length = 54 Score = 42.1 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 6/47 (12%), Positives = 17/47 (36%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 + ++R L + ++ + L +E+ ++ KE Sbjct: 8 LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEY 54 >gi|189519733|ref|XP_001340041.2| PREDICTED: probable peptide chain release factor C12orf65 homolog, mitochondrial [Danio rerio] Length = 156 Score = 42.1 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 9/109 (8%) Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 S + + E + R SG GGQ N T + V + HIP+G+VV+C Sbjct: 24 WPSVLPAAGKKYQIELPVVHEEELEEQFVRGSGPGGQATNKTSNCVVLRHIPSGIVVKCH 83 Query: 265 QERSQHKNKAQAWNMLRAKL---------YELELQKREEIANIGESSKT 304 + RS N+ +A +LR KL L+++K + K Sbjct: 84 ETRSVDLNRKRAREILREKLEVAYKGEESELLKMKKESMQKKQDKRRKV 132 >gi|149197233|ref|ZP_01874285.1| putative peptide chain release factor 2 [Lentisphaera araneosa HTCC2155] gi|149139779|gb|EDM28180.1| putative peptide chain release factor 2 [Lentisphaera araneosa HTCC2155] Length = 125 Score = 42.1 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 36/79 (45%), Positives = 51/79 (64%) Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +C+ +RASGAGGQHVNTTDSAVR+ H PTG+VVQ + RSQH+N+ LR L Sbjct: 23 RECQFSAFRASGAGGQHVNTTDSAVRLVHFPTGLVVQSSESRSQHRNREICLKKLRQSLV 82 Query: 286 ELELQKREEIANIGESSKT 304 ++++ +A + S + Sbjct: 83 MAGRKRKKRVATRKKRSVS 101 >gi|207111372|ref|ZP_03245534.1| peptide chain release factor 1 [Helicobacter pylori HPKX_438_CA4C1] Length = 51 Score = 42.1 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 6/53 (11%) Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLR 327 +L+A+LYE ++++++ + K ++G G +IR+Y P + + R Sbjct: 2 KILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSERIRTYNY-PQNRLSEHR 51 >gi|78222830|ref|YP_384577.1| class I peptide chain release factor [Geobacter metallireducens GS-15] gi|78194085|gb|ABB31852.1| Class I peptide chain release factor [Geobacter metallireducens GS-15] Length = 107 Score = 42.1 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 35/65 (53%), Positives = 44/65 (67%) Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 IEI+E+D + + YR SG GGQH N T+S VRI H+PTGVVVQ + RSQ +N+ A Sbjct: 1 MIEINEADLKFEFYRGSGPGGQHRNVTESGVRIRHVPTGVVVQACESRSQARNREIALER 60 Query: 280 LRAKL 284 LR L Sbjct: 61 LRQIL 65 >gi|295702444|ref|YP_003595519.1| putative ABC transporter ATP-binding protein [Bacillus megaterium DSM 319] gi|294800103|gb|ADF37169.1| putative ABC transporter, ATP-binding protein [Bacillus megaterium DSM 319] Length = 644 Score = 42.1 bits (97), Expect = 0.13, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 17/38 (44%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53 + L L TK DP ++ + ++ + L +E L Sbjct: 94 LKKMEKELRTLETKMGDPDIFNDSVQYEKLTKEYDQLQ 131 >gi|197120075|ref|YP_002140502.1| peptidyl-tRNA hydrolase-like protein [Geobacter bemidjiensis Bem] gi|197089435|gb|ACH40706.1| peptidyl-tRNA hydrolase-related protein [Geobacter bemidjiensis Bem] Length = 132 Score = 42.1 bits (97), Expect = 0.14, Method: Composition-based stats. Identities = 28/69 (40%), Positives = 38/69 (55%) Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 E+ +SE ASG GGQHVN + S V + H+PTGV V+C + RSQ N+ A Sbjct: 17 KMEELGVSEQQIEERFVHASGRGGQHVNKSSSCVYLKHLPTGVEVKCMESRSQSLNRFLA 76 Query: 277 WNMLRAKLY 285 +L K+ Sbjct: 77 RRLLLEKIA 85 >gi|294497079|ref|YP_003560779.1| putative ABC transporter ATP-binding protein [Bacillus megaterium QM B1551] gi|294347016|gb|ADE67345.1| putative ABC transporter, ATP-binding protein [Bacillus megaterium QM B1551] Length = 644 Score = 42.1 bits (97), Expect = 0.14, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 17/38 (44%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53 + L L TK DP ++ + ++ + L +E L Sbjct: 94 LKKMEKELRTLETKMGDPDIFNDSVQYEKLTKEYDQLQ 131 >gi|242223756|ref|XP_002477455.1| predicted protein [Postia placenta Mad-698-R] gi|220722947|gb|EED77345.1| predicted protein [Postia placenta Mad-698-R] Length = 275 Score = 42.1 bits (97), Expect = 0.14, Method: Composition-based stats. Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 3/90 (3%) Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 + E+ E D R SG GGQ +N T++ V++ H PTG+ V CQ+ RS +N+ Sbjct: 159 HKQRVVPELKEEDLEEAFVRGSGPGGQSINKTENNVQLLHKPTGLRVSCQETRSLSQNRK 218 Query: 275 QAWNMLRAKLYELE---LQKREEIANIGES 301 A +L KL L L K+E + + Sbjct: 219 LARRILLGKLDALYNPGLSKQEVKKALQQE 248 >gi|227486228|ref|ZP_03916544.1| ABC superfamily ATP binding cassette transporter, ABC protein [Anaerococcus lactolyticus ATCC 51172] gi|227235859|gb|EEI85874.1| ABC superfamily ATP binding cassette transporter, ABC protein [Anaerococcus lactolyticus ATCC 51172] Length = 640 Score = 42.1 bits (97), Expect = 0.14, Method: Composition-based stats. Identities = 6/70 (8%), Positives = 26/70 (37%), Gaps = 3/70 (4%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-KE 61 + ++ + D + +++ L ++ + + + RE + L++ + +E Sbjct: 573 IKNKIKSIEK--DMEEIDKKIKDLTKESLAEGFYDDQARVAEVFREMKDLEDMRDDLDEE 630 Query: 62 IQDRLCDNLI 71 + + Sbjct: 631 WLNLNMELEE 640 >gi|298249625|ref|ZP_06973429.1| Class I peptide chain release factor [Ktedonobacter racemifer DSM 44963] gi|297547629|gb|EFH81496.1| Class I peptide chain release factor [Ktedonobacter racemifer DSM 44963] Length = 118 Score = 42.1 bits (97), Expect = 0.14, Method: Composition-based stats. Identities = 28/72 (38%), Positives = 42/72 (58%) Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 I+ + E DC I+ + A G GGQH N +S VR+ H P+G VV + RSQ+ N+ A Sbjct: 6 YPIDRDSLERDCTIEFFIAGGPGGQHRNKVESGVRLIHRPSGQVVTATERRSQYANREMA 65 Query: 277 WNMLRAKLYELE 288 + + A+L L+ Sbjct: 66 FERMAARLERLQ 77 >gi|307170845|gb|EFN62956.1| Uncharacterized protein C12orf65-like protein [Camponotus floridanus] Length = 138 Score = 42.1 bits (97), Expect = 0.14, Method: Composition-based stats. Identities = 32/92 (34%), Positives = 48/92 (52%) Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +D S ++ E+D R SG GGQ N T++AV + H PTG+VV+C + RS NK Sbjct: 22 HLDYSKVPKLDEADLEEKFIRGSGPGGQATNKTNNAVSLKHKPTGLVVKCHETRSLWDNK 81 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTE 305 +A ++ KL L ++ A I K + Sbjct: 82 KRAREIMITKLDNLLNKEYSIEAQIRGLEKKQ 113 >gi|328544007|ref|YP_004304116.1| ABC transporter nucleotide binding/ATPase protein [polymorphum gilvum SL003B-26A1] gi|326413751|gb|ADZ70814.1| ABC transporter, nucleotide binding/ATPase protein [Polymorphum gilvum SL003B-26A1] Length = 623 Score = 42.1 bits (97), Expect = 0.15, Method: Composition-based stats. Identities = 9/72 (12%), Positives = 25/72 (34%), Gaps = 4/72 (5%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLW-QNVIEAKMLMRERQHLDNAI-SFIK 60 L +++ + ++ L+ DP + ++ A RER ++ + + + Sbjct: 554 LRKKIEAAEK--EMARLQDKIVMLDQTMADPDFFLRDPERAAKFARERAFIEKKLAATEE 611 Query: 61 EIQDRLCDNLIL 72 E + Sbjct: 612 EWLQLAAELEEA 623 >gi|282890772|ref|ZP_06299292.1| hypothetical protein pah_c026o105 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499365|gb|EFB41664.1| hypothetical protein pah_c026o105 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 118 Score = 42.1 bits (97), Expect = 0.15, Method: Composition-based stats. Identities = 33/66 (50%), Positives = 44/66 (66%) Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +C + +RA G+GGQHVN TDSAVR+TH PTG+V+ CQ RSQH NK + LR ++ Sbjct: 15 KECTMTAFRARGSGGQHVNVTDSAVRLTHNPTGIVITCQVHRSQHLNKKECLVKLREEVE 74 Query: 286 ELELQK 291 +K Sbjct: 75 RRNYRK 80 >gi|284802519|ref|YP_003414384.1| hypothetical protein LM5578_2275 [Listeria monocytogenes 08-5578] gi|284995661|ref|YP_003417429.1| hypothetical protein LM5923_2226 [Listeria monocytogenes 08-5923] gi|284058081|gb|ADB69022.1| hypothetical protein LM5578_2275 [Listeria monocytogenes 08-5578] gi|284061128|gb|ADB72067.1| hypothetical protein LM5923_2226 [Listeria monocytogenes 08-5923] Length = 650 Score = 41.7 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 9/70 (12%), Positives = 30/70 (42%), Gaps = 6/70 (8%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFI 59 R+L + + ++++ L + +P ++Q+ +A + +E + + + Sbjct: 583 KRKLEEIEKSM--EETDEKIAELELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEW 640 Query: 60 KEIQDRLCDN 69 ++I + L Sbjct: 641 EQISEELESI 650 >gi|16804112|ref|NP_465597.1| hypothetical protein lmo2073 [Listeria monocytogenes EGD-e] gi|224501129|ref|ZP_03669436.1| hypothetical protein LmonFR_01170 [Listeria monocytogenes FSL R2-561] gi|254827039|ref|ZP_05231726.1| ABC transporter [Listeria monocytogenes FSL N3-165] gi|16411543|emb|CAD00151.1| lmo2073 [Listeria monocytogenes EGD-e] gi|258599421|gb|EEW12746.1| ABC transporter [Listeria monocytogenes FSL N3-165] Length = 650 Score = 41.7 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 9/70 (12%), Positives = 30/70 (42%), Gaps = 6/70 (8%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFI 59 R+L + + ++++ L + +P ++Q+ +A + +E + + + Sbjct: 583 KRKLEEIEKSM--EETDEKIAELELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEW 640 Query: 60 KEIQDRLCDN 69 ++I + L Sbjct: 641 EQISEELESI 650 >gi|253702397|ref|YP_003023586.1| class I peptide chain release factor [Geobacter sp. M21] gi|251777247|gb|ACT19828.1| Class I peptide chain release factor [Geobacter sp. M21] Length = 132 Score = 41.7 bits (96), Expect = 0.15, Method: Composition-based stats. Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 4/99 (4%) Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 E+ +SE ASG GGQHVN + S V + H+PTGV V+C + RSQ N+ A Sbjct: 17 KMEELGVSEQQIEERFVHASGRGGQHVNKSSSCVYLKHLPTGVEVKCMESRSQSLNRFLA 76 Query: 277 WNMLRAKLYE----LELQKREEIANIGESSKTEIGWGRQ 311 +L K+ L +++ + ++ + G + Sbjct: 77 RRLLLEKITAAGGGLTKKEQAAEKLKRQKARRKKRSGAK 115 >gi|332982851|ref|YP_004464292.1| ABC transporter-like protein [Mahella australiensis 50-1 BON] gi|332700529|gb|AEE97470.1| ABC transporter related protein [Mahella australiensis 50-1 BON] Length = 617 Score = 41.7 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 7/49 (14%), Positives = 18/49 (36%), Gaps = 1/49 (2%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKEI 62 + R++ L DP ++ + + + L E L + ++ Sbjct: 568 EIVTIEDRIAELEAAMCDPDVYTDGQKMRQLTDEHAKLKTELEELYEKW 616 >gi|297693336|ref|XP_002823974.1| PREDICTED: uncharacterized protein C12orf65-like isoform 1 [Pongo abelii] gi|297693338|ref|XP_002823975.1| PREDICTED: uncharacterized protein C12orf65-like isoform 2 [Pongo abelii] gi|297693340|ref|XP_002823976.1| PREDICTED: uncharacterized protein C12orf65-like isoform 3 [Pongo abelii] gi|297693342|ref|XP_002823977.1| PREDICTED: uncharacterized protein C12orf65-like isoform 4 [Pongo abelii] gi|297693344|ref|XP_002823978.1| PREDICTED: uncharacterized protein C12orf65-like isoform 5 [Pongo abelii] Length = 166 Score = 41.7 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 23/76 (30%), Positives = 40/76 (52%) Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + + D + + E++ + G GGQ N T + V + HIP+G+VV+C Q RS Sbjct: 41 VQMAGKKDYPALLYLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRS 100 Query: 269 QHKNKAQAWNMLRAKL 284 +N+ A +L+ K+ Sbjct: 101 VDQNRKLARKILQEKV 116 >gi|182414215|ref|YP_001819281.1| class I peptide chain release factor [Opitutus terrae PB90-1] gi|177841429|gb|ACB75681.1| Class I peptide chain release factor [Opitutus terrae PB90-1] Length = 131 Score = 41.7 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 30/75 (40%), Positives = 38/75 (50%) Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 + + R SG GGQ +N T S V + H PTGV V+CQ ERSQ N+ AW L Sbjct: 16 VRVEEVDERFVRGSGPGGQKINKTSSTVWLRHGPTGVEVRCQAERSQAANREVAWWELCE 75 Query: 283 KLYELELQKREEIAN 297 KL ++RE Sbjct: 76 KLEARVRREREASLQ 90 >gi|320587327|gb|EFW99807.1| peptidyl-tRNA hydrolase domain containing protein [Grosmannia clavigera kw1407] Length = 149 Score = 41.7 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 2/82 (2%) Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 E + + +G GGQ +N T+SAV++ H PTG+VV+ Q RS+ +N+ A +L A+L Sbjct: 52 EDEIEEMFVKGTGPGGQKINKTNSAVQLIHRPTGIVVKSQATRSRSQNRTIARQVLAARL 111 Query: 285 YELE--LQKREEIANIGESSKT 304 EL Q R I + K Sbjct: 112 DELHNGSQSRTAIVADSKRRKK 133 >gi|154757477|gb|AAI51776.1| C17H12ORF65 protein [Bos taurus] Length = 143 Score = 41.7 bits (96), Expect = 0.16, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 8/81 (9%) Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 + E + + G GGQ N T + V + H+P+G+VV+C Q RS +N+ A +L+ Sbjct: 55 LDERELEEQFVKGHGPGGQATNKTSNCVVLRHVPSGIVVKCHQTRSVDQNRKLARRILQE 114 Query: 283 KLYELE--------LQKREEI 295 K+ +KRE Sbjct: 115 KVDVFYNGENSLVCREKREAE 135 >gi|311107251|ref|YP_003980104.1| ABC transporter [Achromobacter xylosoxidans A8] gi|310761940|gb|ADP17389.1| ABC transporter family protein 64 [Achromobacter xylosoxidans A8] Length = 638 Score = 41.7 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 28/74 (37%), Gaps = 8/74 (10%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEA--KMLMRER----QHLDNAI 56 L +L + + + +L L+ DP L+ + A + +M E + +D Sbjct: 563 LESKLAKIET--EMEKLRAKLHALDAVIADPDLYSDARRAERQKVMAEHGEHGKRMDELE 620 Query: 57 SFIKEIQDRLCDNL 70 EIQ L + Sbjct: 621 EQWLEIQGSLEEIE 634 >gi|296213216|ref|XP_002753183.1| PREDICTED: uncharacterized protein C12orf65-like [Callithrix jacchus] Length = 170 Score = 41.7 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 23/76 (30%), Positives = 40/76 (52%) Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + + D + + E++ + G GGQ N T + V + HIP+G+VV+C Q RS Sbjct: 41 VQIAGKKDYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRS 100 Query: 269 QHKNKAQAWNMLRAKL 284 +N+ A +L+ K+ Sbjct: 101 VDQNRKLARKILQEKV 116 >gi|213583737|ref|ZP_03365563.1| peptide chain release factor-like protein [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 147 Score = 41.7 bits (96), Expect = 0.17, Method: Composition-based stats. Identities = 44/151 (29%), Positives = 66/151 (43%), Gaps = 6/151 (3%) Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD-GEEAGIKSATLLIKGP 175 L++ + G E L T+ A + K LE ++SA + + G Sbjct: 2 ILLQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61 Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235 A + + G + SPY + R + I S + I + R +T R+ Sbjct: 62 KAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGI-----GRFSADEHIQSDEIRFETLRS 116 Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 SG GGQHVN TDSAVR TH+ +G+ V+ Q E Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSE 147 >gi|303232237|ref|ZP_07318936.1| ABC transporter, ATP-binding protein [Atopobium vaginae PB189-T1-4] gi|302481647|gb|EFL44708.1| ABC transporter, ATP-binding protein [Atopobium vaginae PB189-T1-4] Length = 699 Score = 41.7 bits (96), Expect = 0.18, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 20/51 (39%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 R + L K D L+ + +M E L +S ++E L D + Sbjct: 646 ARKAELEEKLADSDLYNDKAAFGDVMSEYNALVEKVSALEEEWLELSDVVD 696 >gi|256085783|ref|XP_002579092.1| hypothetical protein [Schistosoma mansoni] gi|238664498|emb|CAZ35331.1| conserved hypothetical protein [Schistosoma mansoni] Length = 155 Score = 41.7 bits (96), Expect = 0.18, Method: Composition-based stats. Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 5/108 (4%) Query: 201 RRHTSFSSIWVYPVV-----DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255 R + + + P + +E D SG GGQ +N T + V + HI Sbjct: 3 RICSWLAKCSLSPHHFSLRFHSKNQWLFNECDLSEMAVLGSGPGGQSINKTANCVVLKHI 62 Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 PTG+VV+CQ R +N+ A L KL + I + K Sbjct: 63 PTGIVVKCQDSRELERNRILARQRLNDKLDVHFNGENSRIEQLRHREK 110 >gi|73995153|ref|XP_543374.2| PREDICTED: similar to CG30100-PA [Canis familiaris] Length = 440 Score = 41.7 bits (96), Expect = 0.18, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 40/82 (48%) Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262 + + + D + ES+ + G GGQ N T + V + HIP+G+VV+ Sbjct: 309 RVAVTLVQAAGKKDRPALPLLDESELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVK 368 Query: 263 CQQERSQHKNKAQAWNMLRAKL 284 C Q RS +N+ A +L+ K+ Sbjct: 369 CHQTRSVDQNRKLARQILQEKV 390 >gi|37523609|ref|NP_926986.1| hypothetical protein glr4040 [Gloeobacter violaceus PCC 7421] gi|35214614|dbj|BAC91981.1| glr4040 [Gloeobacter violaceus PCC 7421] Length = 125 Score = 41.7 bits (96), Expect = 0.18, Method: Composition-based stats. Identities = 32/65 (49%), Positives = 44/65 (67%) Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 E DC ++ ASG GGQH N T+S VR+TH P+GVVV + RSQH+N+ A+ + AKL Sbjct: 22 ERDCTLEFVIASGPGGQHRNKTESGVRLTHRPSGVVVSATERRSQHQNREVAFERMAAKL 81 Query: 285 YELEL 289 +L+ Sbjct: 82 ADLQR 86 >gi|270013378|gb|EFA09826.1| hypothetical protein TcasGA2_TC011973 [Tribolium castaneum] Length = 179 Score = 41.7 bits (96), Expect = 0.19, Method: Composition-based stats. Identities = 34/103 (33%), Positives = 50/103 (48%) Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 R SI + +D S ++ ES+ R SG GGQ N T + V + H+PTG+VV Sbjct: 51 RTRLIFSIVRFKHIDYSRVPQLVESELEEQHVRGSGPGGQATNKTSNCVVLKHVPTGLVV 110 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 +C + RS +N+ +A L KL L + A + E K Sbjct: 111 KCHETRSLDQNRKKARQYLVTKLDNLLNGDQSVEAQMREIEKK 153 >gi|56962646|ref|YP_174372.1| ABC transporter ATP-binding protein [Bacillus clausii KSM-K16] gi|56908884|dbj|BAD63411.1| ABC transporter ATP-binding protein [Bacillus clausii KSM-K16] Length = 637 Score = 41.3 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 8/63 (12%), Positives = 26/63 (41%), Gaps = 6/63 (9%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER----QHLDNAISFI 59 R++ + + + +S L+ + DP ++ + +A+ + E L+ + Sbjct: 575 QRRIEAIET--ELEQIEASISALHEQLADPDVYTDHQKAQTIQAELEQQNNALEALMEEW 632 Query: 60 KEI 62 + + Sbjct: 633 ETL 635 >gi|300361281|ref|ZP_07057458.1| peptide chain release factor [Lactobacillus gasseri JV-V03] gi|300353900|gb|EFJ69771.1| peptide chain release factor [Lactobacillus gasseri JV-V03] Length = 53 Score = 41.3 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 22/50 (44%) Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 +P W + +A+ L+ E + K+++++ D LEL + Sbjct: 1 MAEPGFWDDQEQAQSLINETNRMKEKSENFKQLEEKFEDAQTALELLKTD 50 >gi|210634150|ref|ZP_03298012.1| hypothetical protein COLSTE_01933 [Collinsella stercoris DSM 13279] gi|210158897|gb|EEA89868.1| hypothetical protein COLSTE_01933 [Collinsella stercoris DSM 13279] Length = 126 Score = 41.3 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 31/82 (37%), Positives = 51/82 (62%), Gaps = 4/82 (4%) Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +C + +RASG GGQ VNTTDSAVR+ H+P+G+VV ++ RSQ +N+A L+A+L Sbjct: 24 RECEVQVFRASGPGGQGVNTTDSAVRMRHVPSGIVVTARESRSQFQNRASCLRKLKAELE 83 Query: 286 EL----ELQKREEIANIGESSK 303 + +K + + ++ + Sbjct: 84 RRARPPKQRKPTKPSKAAKARR 105 >gi|238494178|ref|XP_002378325.1| peptidyl-tRNA hydrolase domain protein [Aspergillus flavus NRRL3357] gi|317148917|ref|XP_003190253.1| peptidyl-tRNA hydrolase domain protein [Aspergillus oryzae RIB40] gi|220694975|gb|EED51318.1| peptidyl-tRNA hydrolase domain protein [Aspergillus flavus NRRL3357] Length = 176 Score = 41.3 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 55/110 (50%), Gaps = 3/110 (2%) Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 + ++ + +++ ++D I + +G GGQ +N T+SAV++ Sbjct: 13 PYTQPIASLRCFTTTFHLT-NKPLPPRLKLHDADLTISYLKGTGPGGQKINKTNSAVQLI 71 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 H PTG+VV+ Q RS+ +N+ A +L K+ +LE K ++ ++ + Sbjct: 72 HKPTGLVVKSQATRSRSQNEKIARQLLADKVEQLE--KGDQSRAAIKADR 119 >gi|332254315|ref|XP_003276272.1| PREDICTED: probable peptide chain release factor C12orf65, mitochondrial-like isoform 1 [Nomascus leucogenys] gi|332254317|ref|XP_003276273.1| PREDICTED: probable peptide chain release factor C12orf65, mitochondrial-like isoform 2 [Nomascus leucogenys] gi|332254319|ref|XP_003276274.1| PREDICTED: probable peptide chain release factor C12orf65, mitochondrial-like isoform 3 [Nomascus leucogenys] gi|332254321|ref|XP_003276275.1| PREDICTED: probable peptide chain release factor C12orf65, mitochondrial-like isoform 4 [Nomascus leucogenys] Length = 166 Score = 41.3 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 23/76 (30%), Positives = 40/76 (52%) Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + + D + + E++ + G GGQ N T + V + HIP+G+VV+C Q RS Sbjct: 41 VQMAGKKDYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRS 100 Query: 269 QHKNKAQAWNMLRAKL 284 +N+ A +L+ K+ Sbjct: 101 VDQNRKLARKILQEKV 116 >gi|22748627|ref|NP_689482.1| probable peptide chain release factor C12orf65, mitochondrial [Homo sapiens] gi|219879802|ref|NP_001137377.1| probable peptide chain release factor C12orf65, mitochondrial [Homo sapiens] gi|303304971|ref|NP_001181924.1| probable peptide chain release factor C12orf65, mitochondrial [Homo sapiens] gi|74733574|sp|Q9H3J6|CL065_HUMAN RecName: Full=Probable peptide chain release factor C12orf65, mitochondrial; Flags: Precursor gi|12002002|gb|AAG43144.1|AF061733_1 My030 protein [Homo sapiens] gi|17390320|gb|AAH18145.1| Chromosome 12 open reading frame 65 [Homo sapiens] gi|21755354|dbj|BAC04665.1| unnamed protein product [Homo sapiens] gi|38382804|gb|AAH62329.1| Chromosome 12 open reading frame 65 [Homo sapiens] gi|119618802|gb|EAW98396.1| hypothetical protein FLJ38663, isoform CRA_b [Homo sapiens] gi|312152346|gb|ADQ32685.1| chromosome 12 open reading frame 65 [synthetic construct] Length = 166 Score = 41.3 bits (95), Expect = 0.20, Method: Composition-based stats. Identities = 23/76 (30%), Positives = 40/76 (52%) Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268 + + D + + E++ + G GGQ N T + V + HIP+G+VV+C Q RS Sbjct: 41 VQMAGKKDYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRS 100 Query: 269 QHKNKAQAWNMLRAKL 284 +N+ A +L+ K+ Sbjct: 101 VDQNRKLARKILQEKV 116 >gi|50545671|ref|XP_500374.1| YALI0B01144p [Yarrowia lipolytica] gi|49646240|emb|CAG82589.1| YALI0B01144p [Yarrowia lipolytica] Length = 154 Score = 41.3 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 29/90 (32%), Positives = 46/90 (51%) Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257 ++ R S S + ++ E++ R R SG GGQ +N + +ITHIPT Sbjct: 3 KSASRAFSTSRALLKKTPQMPPRPKVDENEIRESFIRGSGPGGQCINRRSTRCQITHIPT 62 Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 G+VV Q+ RS +N+ A +L KL ++ Sbjct: 63 GLVVSSQKTRSLEENRKIARQILADKLEQM 92 >gi|210633119|ref|ZP_03297686.1| hypothetical protein COLSTE_01595 [Collinsella stercoris DSM 13279] gi|210159273|gb|EEA90244.1| hypothetical protein COLSTE_01595 [Collinsella stercoris DSM 13279] Length = 673 Score = 41.3 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 9/75 (12%), Positives = 20/75 (26%), Gaps = 9/75 (12%) Query: 3 LSRQLNCLGGLFD-----WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI- 56 L+R+L + R L L+ + + + E L + Sbjct: 592 LNRRLKGTKDRLKKVEAALEVKRARYDELMALMASEELYADQDKFNEALAEYNALKQELP 651 Query: 57 ---SFIKEIQDRLCD 68 E+ + + Sbjct: 652 GLEDEWLELSTTIEE 666 >gi|322419681|ref|YP_004198904.1| Class I peptide chain release factor [Geobacter sp. M18] gi|320126068|gb|ADW13628.1| Class I peptide chain release factor [Geobacter sp. M18] Length = 106 Score = 41.3 bits (95), Expect = 0.21, Method: Composition-based stats. Identities = 39/101 (38%), Positives = 50/101 (49%), Gaps = 15/101 (14%) Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 +EI ESD +++ YRASG GGQH NTTDSAVRI H+PTG+V Q + RSQ +N+ +A Sbjct: 1 MVEIKESDIKVEFYRASGPGGQHRNTTDSAVRIRHLPTGIVAQASESRSQAQNREKALER 60 Query: 280 LRAKLYEL---------------ELQKREEIANIGESSKTE 305 L L +KR K Sbjct: 61 LAEMLRRREQKRKKRIATKVPRGAKEKRLSDKKAVSERKKL 101 >gi|46446182|ref|YP_007547.1| putative peptide chain release factor 2 [Candidatus Protochlamydia amoebophila UWE25] gi|46399823|emb|CAF23272.1| putative peptide chain release factor 2 [Candidatus Protochlamydia amoebophila UWE25] Length = 118 Score = 41.3 bits (95), Expect = 0.22, Method: Composition-based stats. Identities = 31/65 (47%), Positives = 47/65 (72%) Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 +C++ T+R+SG+GGQH+N T+SAVR+TH PTG+VV Q RSQ++NK LR + + Sbjct: 18 ECQVQTFRSSGSGGQHINVTNSAVRLTHFPTGIVVSSQTFRSQYRNKQNCLAKLRQTVEK 77 Query: 287 LELQK 291 L ++ Sbjct: 78 LNYRQ 82 >gi|254502936|ref|ZP_05115087.1| ABC transporter, ATP-binding protein [Labrenzia alexandrii DFL-11] gi|222439007|gb|EEE45686.1| ABC transporter, ATP-binding protein [Labrenzia alexandrii DFL-11] Length = 628 Score = 41.3 bits (95), Expect = 0.23, Method: Composition-based stats. Identities = 9/72 (12%), Positives = 27/72 (37%), Gaps = 4/72 (5%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQHLD-NAISFIK 60 L ++++ + Q+++ ++ DP +Q + A +ER + + + Sbjct: 558 LRQKIDAAEK--EMTRLQQKIAKIDDMLADPEFFQTDPNRAAKFAKERAFCEKKLVKTEE 615 Query: 61 EIQDRLCDNLIL 72 E + + Sbjct: 616 EWLELSAEFEEA 627 >gi|189426554|ref|YP_001953731.1| class I peptide chain release factor [Geobacter lovleyi SZ] gi|189422813|gb|ACD97211.1| Class I peptide chain release factor [Geobacter lovleyi SZ] Length = 107 Score = 41.3 bits (95), Expect = 0.23, Method: Composition-based stats. Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 1/88 (1%) Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 + IEI+E+D R++ YRASG GGQH NTTDSAVRI H+PTG+VV + RSQ +N+ A Sbjct: 1 MSIEINETDIRVEFYRASGPGGQHRNTTDSAVRIRHLPTGIVVHAAENRSQLRNREVAME 60 Query: 279 MLRAKLYELEL-QKREEIANIGESSKTE 305 LR L + +K+ + + K + Sbjct: 61 RLRLALEKRNRVEKKRMATKVPKGQKLQ 88 >gi|229815396|ref|ZP_04445731.1| hypothetical protein COLINT_02443 [Collinsella intestinalis DSM 13280] gi|229809176|gb|EEP44943.1| hypothetical protein COLINT_02443 [Collinsella intestinalis DSM 13280] Length = 670 Score = 41.3 bits (95), Expect = 0.24, Method: Composition-based stats. Identities = 8/69 (11%), Positives = 19/69 (27%), Gaps = 6/69 (8%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI----SFI 59 +L + + D R L L+ + + + E L + Sbjct: 597 KDRLKKVEA--ELDVKRARYDELMALMASEELYADQDKFNAALVEYNGLKQELPALEDEW 654 Query: 60 KEIQDRLCD 68 E+ + + Sbjct: 655 LELSTTIEE 663 >gi|254831686|ref|ZP_05236341.1| hypothetical protein Lmon1_10043 [Listeria monocytogenes 10403S] Length = 650 Score = 41.3 bits (95), Expect = 0.24, Method: Composition-based stats. Identities = 8/70 (11%), Positives = 30/70 (42%), Gaps = 6/70 (8%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFI 59 R+L + + ++++ + + +P ++Q+ +A + +E + + + Sbjct: 583 KRKLEEIEKSM--EETDEKIAEIELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEW 640 Query: 60 KEIQDRLCDN 69 ++I + L Sbjct: 641 EQISEELESI 650 >gi|118590101|ref|ZP_01547504.1| putative abc transporter atp-binding protein [Stappia aggregata IAM 12614] gi|118437073|gb|EAV43711.1| putative abc transporter atp-binding protein [Stappia aggregata IAM 12614] Length = 627 Score = 41.3 bits (95), Expect = 0.24, Method: Composition-based stats. Identities = 8/72 (11%), Positives = 25/72 (34%), Gaps = 4/72 (5%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLW-QNVIEAKMLMRERQHLD-NAISFIK 60 L ++++ + ++ L+ DP + ++ A +ER + I + Sbjct: 557 LKQKIDAAEK--EMKRLQDKIIKLDEALADPEFFAKDPERAAKFAKERAFCEKKLIKTEE 614 Query: 61 EIQDRLCDNLIL 72 + + + Sbjct: 615 DWLELSAEFEEA 626 >gi|222623231|gb|EEE57363.1| hypothetical protein OsJ_07511 [Oryza sativa Japonica Group] Length = 1610 Score = 41.3 bits (95), Expect = 0.24, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 34/114 (29%), Gaps = 2/114 (1%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD-NLILL 73 D N RL T+ W+ E K + +E+ L + ++ + R+ D Sbjct: 1438 DKKNLHDRLHEAETQLSQFKAWK-REELKKITKEKNALAERLKGVEASRKRVDDEFKTQY 1496 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 LE + + + + E+L + + G Sbjct: 1497 IHTLETSIQEEMARHAPVYGVGVEALSLDELETLTNIHERGLRQIHAIRQRKGS 1550 >gi|70984320|ref|XP_747675.1| peptidyl-tRNA hydrolase domain protein [Aspergillus fumigatus Af293] gi|66845302|gb|EAL85637.1| peptidyl-tRNA hydrolase domain protein [Aspergillus fumigatus Af293] gi|159122461|gb|EDP47582.1| peptidyl-tRNA hydrolase domain protein [Aspergillus fumigatus A1163] Length = 208 Score = 41.3 bits (95), Expect = 0.24, Method: Composition-based stats. Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 2/103 (1%) Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 SF+ ++I ++D + + +G GGQ +N T+SAV++ H PTG+VV Sbjct: 32 LRRSFTLASSLSAKQLPPRLKIDDADLTVSYLKGTGPGGQKINKTNSAVQLIHKPTGIVV 91 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 + Q RS+ +N+ A +L K+ EL K + N + + Sbjct: 92 KSQATRSRSQNEKIARQILADKVE--ELLKGDASRNAIRAERA 132 >gi|291414256|ref|XP_002723382.1| PREDICTED: hypothetical protein [Oryctolagus cuniculus] Length = 165 Score = 41.3 bits (95), Expect = 0.24, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 8/82 (9%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 + E++ R + G GGQ N T + V + H+P+G+VV+C Q RS +N+ A +L Sbjct: 53 PPLDENELREQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQNRKLARRIL 112 Query: 281 RAKLY--------ELELQKREE 294 + K+ + +K+E Sbjct: 113 QEKVDVFYHGENSLVYREKQEA 134 >gi|307946015|ref|ZP_07661350.1| holdfast attachment protein C [Roseibium sp. TrichSKD4] gi|307769679|gb|EFO28905.1| holdfast attachment protein C [Roseibium sp. TrichSKD4] Length = 605 Score = 41.3 bits (95), Expect = 0.25, Method: Composition-based stats. Identities = 9/63 (14%), Positives = 24/63 (38%), Gaps = 4/63 (6%) Query: 16 WDNAVQRLSFLNTKTEDPHLW-QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + +L L + DP+L+ +N + L + + ++++ + +L E Sbjct: 545 IEALEAKLEKLQAEMNDPNLYAKNPDKFAKLS---AQITDVTEQKGALEEQWLELEMLNE 601 Query: 75 LAL 77 Sbjct: 602 EMN 604 >gi|189241033|ref|XP_971712.2| PREDICTED: similar to AGAP012195-PA [Tribolium castaneum] Length = 132 Score = 41.3 bits (95), Expect = 0.25, Method: Composition-based stats. Identities = 34/103 (33%), Positives = 50/103 (48%) Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 R SI + +D S ++ ES+ R SG GGQ N T + V + H+PTG+VV Sbjct: 4 RTRLIFSIVRFKHIDYSRVPQLVESELEEQHVRGSGPGGQATNKTSNCVVLKHVPTGLVV 63 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 +C + RS +N+ +A L KL L + A + E K Sbjct: 64 KCHETRSLDQNRKKARQYLVTKLDNLLNGDQSVEAQMREIEKK 106 >gi|210620550|ref|ZP_03292098.1| hypothetical protein CLOHIR_00041 [Clostridium hiranonis DSM 13275] gi|210155264|gb|EEA86270.1| hypothetical protein CLOHIR_00041 [Clostridium hiranonis DSM 13275] Length = 638 Score = 40.9 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 7/65 (10%), Positives = 29/65 (44%), Gaps = 3/65 (4%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKEI 62 ++ L D + ++++ L+ ++ N ++K + E+ L++ ++ ++ Sbjct: 576 KNKIKKLED--DIEQTEKKIAGLDMMLCQEEIYSNPEKSKEVNLEKAELEDKLASLYEKW 633 Query: 63 QDRLC 67 + + Sbjct: 634 EQIME 638 >gi|148726036|emb|CAN87843.1| novel protein [Danio rerio] Length = 137 Score = 40.9 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 9/109 (8%) Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 S + + E + R SG GGQ N T + V + HIP+G+VV+C Sbjct: 5 WPSVLPAAGKKYQIELPVVHEEELEEQFVRGSGPGGQATNKTSNCVVLRHIPSGIVVKCH 64 Query: 265 QERSQHKNKAQAWNMLRAKL---------YELELQKREEIANIGESSKT 304 + RS N+ +A +LR KL L+++K + K Sbjct: 65 ETRSVDLNRKRAREILREKLEVAYKGEESELLKMKKESMQKKQDKRRKV 113 >gi|222056398|ref|YP_002538760.1| Class I peptide chain release factor [Geobacter sp. FRC-32] gi|221565687|gb|ACM21659.1| Class I peptide chain release factor [Geobacter sp. FRC-32] Length = 108 Score = 40.9 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 39/78 (50%), Positives = 56/78 (71%) Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278 + +EI E+D +++ YRASG GGQH NTTDSAVRI H+PTG+VVQ + RSQ +N+ A + Sbjct: 1 MTMEIKETDIKVEFYRASGPGGQHRNTTDSAVRIRHLPTGIVVQAAENRSQWQNRELAMS 60 Query: 279 MLRAKLYELELQKREEIA 296 L+ L + E + ++ IA Sbjct: 61 RLQQALIKRERKTKKRIA 78 >gi|317127421|ref|YP_004093703.1| LPXTG-motif cell wall anchor domain protein [Bacillus cellulosilyticus DSM 2522] gi|315472369|gb|ADU28972.1| LPXTG-motif cell wall anchor domain protein [Bacillus cellulosilyticus DSM 2522] Length = 1287 Score = 40.9 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 36/104 (34%), Gaps = 9/104 (8%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L ++ L G + + RLS + E L N E + + HL+ I +K+ Sbjct: 1147 ELQARIADLEGSSEIADLENRLSEIEGLLE--ELKSNFNELEEYV---SHLEALIKDLKD 1201 Query: 62 ----IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101 ++ +L D EEDD + + Sbjct: 1202 EIAALKAQLEDLPEAPGAPEEEDDDKDGPASKEEKDANDSPKND 1245 >gi|297734721|emb|CBI16955.3| unnamed protein product [Vitis vinifera] Length = 224 Score = 40.9 bits (94), Expect = 0.27, Method: Composition-based stats. Identities = 25/54 (46%), Positives = 37/54 (68%) Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 E C + T+++SG GGQH N +SAVR+ H+PTG++ Q ++RSQHKN+ Sbjct: 56 SDEQLMKQCEMSTFKSSGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHKNR 109 >gi|225459890|ref|XP_002263666.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 507 Score = 40.9 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 25/54 (46%), Positives = 37/54 (68%) Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 E C + T+++SG GGQH N +SAVR+ H+PTG++ Q ++RSQHKN+ Sbjct: 56 SDEQLMKQCEMSTFKSSGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHKNR 109 >gi|269123013|ref|YP_003305590.1| YadA domain-containing protein [Streptobacillus moniliformis DSM 12112] gi|268314339|gb|ACZ00713.1| YadA domain protein [Streptobacillus moniliformis DSM 12112] Length = 2092 Score = 40.9 bits (94), Expect = 0.28, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 7/97 (7%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKM---LMRERQHLDNAISFIKEIQDRLCDNLI 71 + D ++L N K + QN + L +E + L + IS I++I+ D Sbjct: 1929 ELDGINKKLEEQNNKL----IAQNNKLNEKRGDLSKELKELKDKISVIEKIKMNEDDLYT 1984 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL 108 L L + + QE +L YK + + Sbjct: 1985 LDGYRLGIHELTKSQEEMLMNIVRELNENYKNRKIYI 2021 >gi|298531050|ref|ZP_07018451.1| ABC transporter related protein [Desulfonatronospira thiodismutans ASO3-1] gi|298509073|gb|EFI32978.1| ABC transporter related protein [Desulfonatronospira thiodismutans ASO3-1] Length = 651 Score = 40.9 bits (94), Expect = 0.29, Method: Composition-based stats. Identities = 9/63 (14%), Positives = 24/63 (38%), Gaps = 4/63 (6%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL----DNAISFIKEIQDRLCDNLI 71 + ++ R L P Q+ + L RE + + D+ + ++E++ ++ Sbjct: 589 LEQSLLRQEELENAMSLPETCQDPDRIRELSREYREVCAQNDSLMHRLEELEQQITQLEA 648 Query: 72 LLE 74 Sbjct: 649 AKP 651 >gi|297621679|ref|YP_003709816.1| putative peptide chain release factor 1 [Waddlia chondrophila WSU 86-1044] gi|297376980|gb|ADI38810.1| putative peptide chain release factor 1 [Waddlia chondrophila WSU 86-1044] Length = 139 Score = 40.9 bits (94), Expect = 0.29, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 42/90 (46%) Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + + + I D SG GGQ VN T S V + H P+G+ ++CQ ERS+ Sbjct: 8 INELQRRMESLGIRNEDLTEKFILGSGKGGQKVNKTASCVYLKHEPSGIEIKCQLERSRE 67 Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGE 300 N+ A +L K+ E L+ + E E Sbjct: 68 LNRFYARRLLCEKIEEKILKIKTEKQKEIE 97 >gi|294658124|ref|XP_460455.2| DEHA2F02090p [Debaryomyces hansenii CBS767] gi|202952893|emb|CAG88762.2| DEHA2F02090p [Debaryomyces hansenii] Length = 180 Score = 40.9 bits (94), Expect = 0.29, Method: Composition-based stats. Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 3/90 (3%) Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRID---TYRASGAGGQHVNTTDSAVRITHIPTG 258 TS+ + + + + ID G GGQ +N ++S V++TH PTG Sbjct: 15 VSTSYVNYAIPKKNKMPPRPKWLIVEEEIDEAFLKGGRGPGGQKINKSNSKVQLTHKPTG 74 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 +VV CQ RSQ +N+ +A +L KL EL+ Sbjct: 75 LVVTCQYSRSQEQNRKRAREILALKLDELQ 104 >gi|56753039|gb|AAW24729.1| SJCHGC03759 protein [Schistosoma japonicum] Length = 163 Score = 40.9 bits (94), Expect = 0.30, Method: Composition-based stats. Identities = 31/109 (28%), Positives = 43/109 (39%), Gaps = 5/109 (4%) Query: 200 SRRHTSFSSIWVYPVV-----DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254 SR + + P + +E D R G GGQ +NTT + V + H Sbjct: 12 SRVYNWLAKCNSSPYCFISRFYSKNQWLFNECDLSEMFVRGWGPGGQSINTTANCVVLKH 71 Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303 PTG++V+CQ R KN+ A L KL + I I K Sbjct: 72 EPTGIMVKCQDSRELEKNRELARRRLNDKLDVHFNGENSRIQQIHRQQK 120 >gi|269123085|ref|YP_003305662.1| YadA domain-containing protein [Streptobacillus moniliformis DSM 12112] gi|268314411|gb|ACZ00785.1| YadA domain protein [Streptobacillus moniliformis DSM 12112] Length = 2075 Score = 40.9 bits (94), Expect = 0.31, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 7/61 (11%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKM---LMRERQHLDNAISFIKEIQDRLCDNLI 71 + D ++L N K + QN + L +E + L + IS I++I+ D Sbjct: 1912 ELDGINKKLEEQNNKL----IAQNNKLNEKRGDLSKELKELKDKISVIEKIKMNEDDLYT 1967 Query: 72 L 72 L Sbjct: 1968 L 1968 >gi|19075491|ref|NP_587991.1| sorting nexin Snx12 (predicted) [Schizosaccharomyces pombe 972h-] gi|74625851|sp|Q9USN1|SNX12_SCHPO RecName: Full=Sorting nexin-12 gi|5748684|emb|CAB53076.1| sorting nexin Snx12 (predicted) [Schizosaccharomyces pombe] Length = 1010 Score = 40.9 bits (94), Expect = 0.31, Method: Composition-based stats. Identities = 18/122 (14%), Positives = 41/122 (33%), Gaps = 3/122 (2%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 ++LS ++ L + + +L+ +NT + L + + K L + Q ++ AI + Sbjct: 623 LQLSESIDELNN--NIEELKAQLNAINTLIKKAELVADQKQLKSLTKNHQEIEKAIHRKE 680 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 +D+ +L + S V + E L + + Sbjct: 681 RQRDQYMSQEEDSKLFNRSRVSIDSFKISKEENTPDFAVYTIRIE-RLENGHVRSGWMVA 739 Query: 121 VH 122 Sbjct: 740 RR 741 >gi|33592829|ref|NP_880473.1| ABC transporter ATP-binding protein [Bordetella pertussis Tohama I] gi|33572477|emb|CAE42048.1| probable ABC transporter ATP-binding protein [Bordetella pertussis Tohama I] gi|332382242|gb|AEE67089.1| ABC transporter ATP-binding protein [Bordetella pertussis CS] Length = 641 Score = 40.9 bits (94), Expect = 0.31, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 15/84 (17%) Query: 2 KLSRQLNCLGGLF---------DWDNAVQRLSFLNTKTEDPHLWQNVIEA--KMLMRER- 49 + ++L L D + A RL L+ D L+ + + +M E Sbjct: 553 EQRQRLATLRKPLAAKLAKVEADMERARARLQELDAVIADADLYSDARRTERQQVMTEHG 612 Query: 50 ---QHLDNAISFIKEIQDRLCDNL 70 + L++ EIQ L + Sbjct: 613 ESGKRLNDLEEQWLEIQQALEEIE 636 >gi|88706760|ref|ZP_01104461.1| ABC transporter, ATP-binding protein [Congregibacter litoralis KT71] gi|88698941|gb|EAQ96059.1| ABC transporter, ATP-binding protein [Congregibacter litoralis KT71] Length = 629 Score = 40.9 bits (94), Expect = 0.31, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 5/56 (8%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQH----LDNAISFIKEIQDR 65 D + R L T DP ++ + E K L+ E L+ I E+++R Sbjct: 573 DIEALESRQGELETLCADPAFYERDPREVKDLLAELASIGGTLEEKIERWTELEER 628 >gi|33601163|ref|NP_888723.1| ABC transporter ATP-binding protein [Bordetella bronchiseptica RB50] gi|33575598|emb|CAE32676.1| probable ABC transporter ATP-binding protein [Bordetella bronchiseptica RB50] Length = 641 Score = 40.9 bits (94), Expect = 0.32, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 15/84 (17%) Query: 2 KLSRQLNCLGGLF---------DWDNAVQRLSFLNTKTEDPHLWQNVIEA--KMLMRER- 49 + ++L L D + A RL L+ D L+ + + +M E Sbjct: 553 EQRQRLATLRKPLAAKLAKVEADMERARARLQELDAVIADADLYSDARRTERQQVMTEHG 612 Query: 50 ---QHLDNAISFIKEIQDRLCDNL 70 + L++ EIQ L + Sbjct: 613 ESGKRLNDLEEQWLEIQQALEEIE 636 >gi|24654113|ref|NP_725560.1| CG30100 [Drosophila melanogaster] gi|21627121|gb|AAM68513.1| CG30100 [Drosophila melanogaster] gi|157816290|gb|ABV82139.1| AT22563p [Drosophila melanogaster] Length = 146 Score = 40.9 bits (94), Expect = 0.32, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 8/93 (8%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 + ESD R SG GGQ VN T + V + H+PT + V+C R KN+ +A +L Sbjct: 28 PVLQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHRLASKNRVEARKLL 87 Query: 281 RAKLYEL--------ELQKREEIANIGESSKTE 305 KL K +E E + + Sbjct: 88 LEKLDVHLNGEHSIAAQVKAQEQRKSTERRRRQ 120 >gi|33596608|ref|NP_884251.1| ABC transporter ATP-binding protein [Bordetella parapertussis 12822] gi|33573309|emb|CAE37292.1| probable ABC transporter ATP-binding protein [Bordetella parapertussis] Length = 641 Score = 40.9 bits (94), Expect = 0.32, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 15/84 (17%) Query: 2 KLSRQLNCLGGLF---------DWDNAVQRLSFLNTKTEDPHLWQNVIEA--KMLMRER- 49 + ++L L D + A RL L+ D L+ + + +M E Sbjct: 553 EQRQRLATLRKPLAAKLAKVEADMERARARLQELDAVIADADLYSDARRTERQQVMTEHG 612 Query: 50 ---QHLDNAISFIKEIQDRLCDNL 70 + L++ EIQ L + Sbjct: 613 ESGKRLNDLEEQWLEIQQALEEIE 636 >gi|118587642|ref|ZP_01545052.1| ABC transporter, ATP-binding protein [Stappia aggregata IAM 12614] gi|118439264|gb|EAV45895.1| ABC transporter, ATP-binding protein [Stappia aggregata IAM 12614] Length = 603 Score = 40.9 bits (94), Expect = 0.32, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 19/58 (32%), Gaps = 1/58 (1%) Query: 16 WDNAVQRLSFLNTKTEDPHLW-QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 + RL L + DP L+ +N + + ++ L +E L Sbjct: 545 IEKLEARLETLQAEMNDPQLYVKNPDKFAKISQQITDLTAEKDAAEEQWLELEMLNEA 602 >gi|118581948|ref|YP_903198.1| class I peptide chain release factor [Pelobacter propionicus DSM 2379] gi|118504658|gb|ABL01141.1| Class I peptide chain release factor [Pelobacter propionicus DSM 2379] Length = 109 Score = 40.9 bits (94), Expect = 0.32, Method: Composition-based stats. Identities = 39/73 (53%), Positives = 49/73 (67%) Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 + +EI E D RI+ YRASG GGQH NTTDSAVRI H+PTG+V Q + RSQ +N+ +A Sbjct: 1 MTTMVEIREEDIRIEYYRASGPGGQHRNTTDSAVRIRHLPTGIVAQASESRSQSRNRERA 60 Query: 277 WNMLRAKLYELEL 289 L A L + E Sbjct: 61 MERLTAALEKRER 73 >gi|153873069|ref|ZP_02001774.1| ABC transporter ATP-binding protein [Beggiatoa sp. PS] gi|152070465|gb|EDN68226.1| ABC transporter ATP-binding protein [Beggiatoa sp. PS] Length = 625 Score = 40.9 bits (94), Expect = 0.33, Method: Composition-based stats. Identities = 8/69 (11%), Positives = 28/69 (40%), Gaps = 2/69 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + + D + + + DP ++ + + + +R++ L + +E+ Sbjct: 553 LQNRVKKVET--ELDRLTKEKAAIEALLGDPTIYDDKNKVQEYVRQQTTLSQNLQQAEEM 610 Query: 63 QDRLCDNLI 71 + + L Sbjct: 611 WLEITEILE 619 >gi|189485401|ref|YP_001956342.1| peptidyl-tRNA hydrolase-like protein [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287360|dbj|BAG13881.1| peptidyl-tRNA hydrolase-like protein [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 136 Score = 40.9 bits (94), Expect = 0.33, Method: Composition-based stats. Identities = 29/78 (37%), Positives = 42/78 (53%) Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 + ESD R+SG GGQ+VN + V + H PTG+ V+C++ER Q N+ A +L Sbjct: 23 VQESDIEEKFIRSSGKGGQNVNKVSTTVYLKHYPTGIEVKCRRERIQGLNRFFARRLLAE 82 Query: 283 KLYELELQKREEIANIGE 300 K+ E L + E E Sbjct: 83 KIEEKVLGRISEKRQKIE 100 >gi|119467602|ref|XP_001257607.1| peptidyl-tRNA hydrolase domain protein [Neosartorya fischeri NRRL 181] gi|119405759|gb|EAW15710.1| peptidyl-tRNA hydrolase domain protein [Neosartorya fischeri NRRL 181] Length = 208 Score = 40.6 bits (93), Expect = 0.34, Method: Composition-based stats. Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 2/103 (1%) Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261 SF+ ++I ++D + + +G GGQ +N T+SAV++ H PTG+VV Sbjct: 32 LRRSFTLASSLSAKQLPPRLKIDDADLTVSYLKGTGPGGQKINKTNSAVQLIHKPTGIVV 91 Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 + Q RS+ +N+ A +L K+ EL K + N + + Sbjct: 92 KSQATRSRSQNEKIARQILADKVE--ELLKGDASRNAIRAERA 132 >gi|281212159|gb|EFA86319.1| ABC transporter family [Polysphondylium pallidum PN500] Length = 825 Score = 40.6 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 61/182 (33%), Gaps = 15/182 (8%) Query: 3 LSRQLNCLGG----LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA--- 55 L R+++ L D + +R+ + + E+P + A+ L+++ L + Sbjct: 301 LRREMDELESQDASSSDMEAICERIGEIMLELEEPD--DSKERAEALLKKLGFLKSMRDG 358 Query: 56 -ISFIK-EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113 +S + + RL L L + + +++ Sbjct: 359 SVSALSGGWRARLEMALALFAEPEILFLDEPTNHLDLHAVFQLASILRNNHQNMTVIVVS 418 Query: 114 SNDAYLEVHAGA----GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169 + ++L++ + G Q A + AE ++F E EEA ++T Sbjct: 419 HDASFLDLVSTDILSINGCMLQQMAGNYSAFEEKAAEYKRFHEHIYENRVREEARQNAST 478 Query: 170 LL 171 Sbjct: 479 AQ 480 >gi|229815133|ref|ZP_04445470.1| hypothetical protein COLINT_02176 [Collinsella intestinalis DSM 13280] gi|229809363|gb|EEP45128.1| hypothetical protein COLINT_02176 [Collinsella intestinalis DSM 13280] Length = 126 Score = 40.6 bits (93), Expect = 0.35, Method: Composition-based stats. Identities = 31/64 (48%), Positives = 42/64 (65%) Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 DC I +RASG GGQ VNTTDSAVR+ H+P+G+VV ++ RSQ +N+A L+ +L Sbjct: 24 RDCDIQAFRASGPGGQGVNTTDSAVRMRHVPSGIVVTARESRSQFQNRASCLRKLKEELT 83 Query: 286 ELEL 289 Sbjct: 84 RRAR 87 >gi|291166817|gb|EFE28863.1| ABC transporter, ATP-binding protein [Filifactor alocis ATCC 35896] Length = 643 Score = 40.6 bits (93), Expect = 0.37, Method: Composition-based stats. Identities = 11/74 (14%), Positives = 30/74 (40%), Gaps = 6/74 (8%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER----QHLDNAIS 57 +L +Q+ L +++ L+ + ++ N EA + +E+ L+ + Sbjct: 572 QLKKQIQTLEET--IMQLEEKIEQLDLELCKEEVYSNPSEAMRVQKEKENASSSLEQTML 629 Query: 58 FIKEIQDRLCDNLI 71 +E+ + L + Sbjct: 630 EWEELHETLEEMDE 643 >gi|39996025|ref|NP_951976.1| ABC transporter ATP-binding protein [Geobacter sulfurreducens PCA] gi|39982790|gb|AAR34249.1| ABC transporter, ATP-binding protein [Geobacter sulfurreducens PCA] Length = 645 Score = 40.6 bits (93), Expect = 0.37, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 22/61 (36%), Gaps = 3/61 (4%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKEIQ 63 ++L L L+ L + DP + + +A+ E L I+ +E + Sbjct: 583 KRLEELESA--IAAEEGLLADLEARMADPAFFDDHEQARRGGEEHAGLTARIASLYEEWE 640 Query: 64 D 64 Sbjct: 641 S 641 >gi|302690942|ref|XP_003035150.1| hypothetical protein SCHCODRAFT_52216 [Schizophyllum commune H4-8] gi|300108846|gb|EFJ00248.1| hypothetical protein SCHCODRAFT_52216 [Schizophyllum commune H4-8] Length = 257 Score = 40.6 bits (93), Expect = 0.37, Method: Composition-based stats. Identities = 27/68 (39%), Positives = 40/68 (58%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 E+ E D R SG GGQ +N T + V++ H PTG+ V CQ+ RS +N+ +A ++ Sbjct: 151 PELREEDLEESFVRGSGPGGQAINKTANNVQLVHKPTGIRVVCQETRSLEQNRKRARKIM 210 Query: 281 RAKLYELE 288 AKL +L Sbjct: 211 IAKLDQLY 218 >gi|195334889|ref|XP_002034109.1| GM21684 [Drosophila sechellia] gi|194126079|gb|EDW48122.1| GM21684 [Drosophila sechellia] Length = 146 Score = 40.6 bits (93), Expect = 0.37, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 8/93 (8%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 + ESD R SG GGQ VN T + V + H+PT + V+C R KN+ +A +L Sbjct: 28 PALQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHRLASKNRVEARKLL 87 Query: 281 RAKLYEL--------ELQKREEIANIGESSKTE 305 KL K +E E + + Sbjct: 88 LEKLDVHLNGEHSIAAQIKAQEQRKSTERRRRQ 120 >gi|195558953|ref|XP_002077323.1| GD20369 [Drosophila simulans] gi|194202425|gb|EDX16001.1| GD20369 [Drosophila simulans] Length = 146 Score = 40.6 bits (93), Expect = 0.38, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 8/93 (8%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 + ESD R SG GGQ VN T + V + H+PT + V+C R KN+ +A +L Sbjct: 28 PALQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHRLASKNRVEARKLL 87 Query: 281 RAKLYEL--------ELQKREEIANIGESSKTE 305 KL K +E E + + Sbjct: 88 LEKLDVHLNGEHSIAAQIKAQEQRKSTERRRRQ 120 >gi|327276060|ref|XP_003222789.1| PREDICTED: probable peptide chain release factor C12orf65, mitochondrial-like [Anolis carolinensis] Length = 197 Score = 40.6 bits (93), Expect = 0.39, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 39/63 (61%) Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 ++E+D R SG GGQ N T + V + H+P+G+VV+C Q RS +N+ +A +L+ Sbjct: 87 PLNEADLEEQFVRGSGPGGQATNKTSNCVVLKHLPSGIVVKCHQTRSVEQNRKKARTILQ 146 Query: 282 AKL 284 K+ Sbjct: 147 EKV 149 >gi|156552109|ref|XP_001605206.1| PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] Length = 159 Score = 40.6 bits (93), Expect = 0.39, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 8/93 (8%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 +I+E D I R SG GGQ N T + V + H+PTG+V++C + RSQ +N A L Sbjct: 43 PKINEDDLEIQYVRGSGPGGQSTNKTSNNVVMKHLPTGLVIKCHETRSQTQNLKIAKEKL 102 Query: 281 RAKLYELE--------LQKREEIANIGESSKTE 305 KL L +K+ E + + Sbjct: 103 INKLDLLYNGEDAVENQKKKLLAKKTSEKQRRQ 135 >gi|213423387|ref|ZP_03356375.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 62 Score = 40.6 bits (93), Expect = 0.41, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 34/62 (54%) Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200 Y+R+AE R+++ E + + +GE G K I G YG LK E G HR+ R+ +S Sbjct: 1 YSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQG 60 Query: 201 RR 202 R Sbjct: 61 RI 62 >gi|323488873|ref|ZP_08094112.1| ABC transporter ATP-binding protein [Planococcus donghaensis MPA1U2] gi|323397436|gb|EGA90243.1| ABC transporter ATP-binding protein [Planococcus donghaensis MPA1U2] Length = 644 Score = 40.6 bits (93), Expect = 0.42, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 27/85 (31%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79 +L L + +P ++ N E +M+E L + Q IL + Sbjct: 98 EAKLRHLEAQMANPDVYNNPEENNKVMKEYDLLQHDFKDAGGYQYESDTRAILHGMKFYP 157 Query: 80 DDCSILQETSDNLQRIKLEVEYKQF 104 D + Q+ +L + Sbjct: 158 HDYDKKVTSLSGGQKTRLMLAKHLL 182 >gi|319784383|ref|YP_004143859.1| ABC transporter [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170271|gb|ADV13809.1| ABC transporter related protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 625 Score = 40.6 bits (93), Expect = 0.42, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Query: 17 DNAVQRLSFLNTKTEDPHLW-QNVIEAKMLMRERQHLDNAISFIKE 61 D +R+ + + +P ++ ++ A L +ER L ++ +E Sbjct: 565 DRIRKRIDGIEDELSNPAVYEKDPSTATRLAKERSQLAQTLAGHEE 610 >gi|139437086|ref|ZP_01771246.1| Hypothetical protein COLAER_00223 [Collinsella aerofaciens ATCC 25986] gi|133776733|gb|EBA40553.1| Hypothetical protein COLAER_00223 [Collinsella aerofaciens ATCC 25986] Length = 132 Score = 40.6 bits (93), Expect = 0.42, Method: Composition-based stats. Identities = 33/77 (42%), Positives = 46/77 (59%) Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267 W + +E DC + +RA+G GGQ VNTTDSAVR+ H PTG+VV ++ R Sbjct: 12 MGWREYAHYAEMSVEELARDCEVQVFRATGPGGQGVNTTDSAVRMKHGPTGIVVTARESR 71 Query: 268 SQHKNKAQAWNMLRAKL 284 SQ +N++ LRA+L Sbjct: 72 SQFQNRSCCLRKLRAEL 88 >gi|322421630|ref|YP_004200853.1| Class I peptide chain release factor [Geobacter sp. M18] gi|320128017|gb|ADW15577.1| Class I peptide chain release factor [Geobacter sp. M18] Length = 143 Score = 40.6 bits (93), Expect = 0.43, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 39/69 (56%) Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 ++ ++E D ASG GGQHVN + S V + HIP+G+ V+C + RSQ N+ Sbjct: 16 TKMEQLGVAEKDLEERFVHASGRGGQHVNKSSSCVYLKHIPSGLEVKCMESRSQSLNRFL 75 Query: 276 AWNMLRAKL 284 A +L KL Sbjct: 76 ARRLLLEKL 84 >gi|327355568|gb|EGE84425.1| peptidyl-tRNA hydrolase domain-containing protein [Ajellomyces dermatitidis ATCC 18188] Length = 184 Score = 40.6 bits (93), Expect = 0.44, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 1/120 (0%) Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + + FS V ++ S+ + +G GGQ +N T+SA Sbjct: 4 WRIRPQWRQPNGILRLFSHCCRLFVKQMPPRPKLDPSEVTGSYLKGTGPGGQAINKTNSA 63 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-YELELQKREEIANIGESSKTEIGW 308 V++ H PTG+VV+ Q RS+ +N+ A +L K+ +L+ +K K + Sbjct: 64 VQLIHKPTGIVVKSQATRSRTQNQKIAMGILAEKVELQLKGEKSRAAIKAETKRKRKASR 123 >gi|212526542|ref|XP_002143428.1| peptidyl-tRNA hydrolase domain protein [Penicillium marneffei ATCC 18224] gi|210072826|gb|EEA26913.1| peptidyl-tRNA hydrolase domain protein [Penicillium marneffei ATCC 18224] Length = 177 Score = 40.6 bits (93), Expect = 0.44, Method: Composition-based stats. Identities = 32/100 (32%), Positives = 51/100 (51%) Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264 SFS+ V ++ + D + +G GGQ +N T+SAV++ H PTG+VV+ Q Sbjct: 23 SFSTCPALAVKQLPPRPKLDDKDITGSYLKGTGPGGQKINKTNSAVQLIHKPTGIVVKSQ 82 Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 RS+ +N+ A +L AK+ LE ++ A K Sbjct: 83 ATRSRSQNQKIAKEILAAKVEVLEKGEQSREAIKNALKKK 122 >gi|164655297|ref|XP_001728779.1| hypothetical protein MGL_4114 [Malassezia globosa CBS 7966] gi|159102663|gb|EDP41565.1| hypothetical protein MGL_4114 [Malassezia globosa CBS 7966] Length = 248 Score = 40.2 bits (92), Expect = 0.45, Method: Composition-based stats. Identities = 26/75 (34%), Positives = 37/75 (49%) Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 + I++ E D R R SG GGQ +N + V + HIPT + CQ RS+ +N+ Sbjct: 123 SKKMPIDLDERDIRERFIRGSGPGGQAINKLSTNVELVHIPTSTRITCQLTRSRAQNREL 182 Query: 276 AWNMLRAKLYELELQ 290 A L +L L Q Sbjct: 183 ARRQLSQRLEWLIKQ 197 >gi|299821508|ref|ZP_07053396.1| ABC superfamily ATP binding cassette transporter, ABC protein [Listeria grayi DSM 20601] gi|299817173|gb|EFI84409.1| ABC superfamily ATP binding cassette transporter, ABC protein [Listeria grayi DSM 20601] Length = 650 Score = 40.2 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 17/39 (43%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53 + ++L + K DP + N + + L+++ L Sbjct: 93 ELQQMERQLREIELKIADPEIISNEAQFQSLLKQYDELQ 131 Score = 39.8 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 32/70 (45%), Gaps = 6/70 (8%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEA----KMLMRERQHLDNAIS 57 KL R+L + + + ++S L + +P ++Q+ + L +++Q + + Sbjct: 583 KLERRLTEIEK--ELEKTEAQISELESLLTEPTVYQDHEKVYEVNTQLEQQKQAAEKWME 640 Query: 58 FIKEIQDRLC 67 +E+ + L Sbjct: 641 EWEEVSENLE 650 >gi|225180872|ref|ZP_03734320.1| ABC transporter related protein [Dethiobacter alkaliphilus AHT 1] gi|225168353|gb|EEG77156.1| ABC transporter related protein [Dethiobacter alkaliphilus AHT 1] Length = 641 Score = 40.2 bits (92), Expect = 0.46, Method: Composition-based stats. Identities = 8/58 (13%), Positives = 23/58 (39%), Gaps = 4/58 (6%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFIKEIQDRLCD 68 + +R++ L + P ++++ A +E + L+ + +E L + Sbjct: 583 EISRVEERINELEAELACPEVFEDYKLASEKGQEMEELKAMLEKLFASWEEYTILLEE 640 >gi|110634105|ref|YP_674313.1| ABC transporter related [Mesorhizobium sp. BNC1] gi|110285089|gb|ABG63148.1| ABC transporter related protein [Chelativorans sp. BNC1] Length = 625 Score = 40.2 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 31/75 (41%), Gaps = 11/75 (14%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQHL--------D 53 L++++ GL + +R+ + + DP L+ + + L +ER L + Sbjct: 553 LAKEIKATEGL--IERTRKRIEAIEAQMADPGLYARDPGKISTLGKERADLAQALARQEE 610 Query: 54 NAISFIKEIQDRLCD 68 + E ++ + + Sbjct: 611 KWLELSTEYEEGVAE 625 >gi|290892220|ref|ZP_06555216.1| ABC transporter [Listeria monocytogenes FSL J2-071] gi|290558343|gb|EFD91861.1| ABC transporter [Listeria monocytogenes FSL J2-071] Length = 650 Score = 40.2 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 8/70 (11%), Positives = 29/70 (41%), Gaps = 3/70 (4%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-KEI 62 R+L + + ++++ L + +P ++Q+ +A + +E + + +E Sbjct: 583 KRKLEEVEKSM--EATDEKIAELEHQLTNPEVFQDHEKALEITQELDAVKATGEKLMEEW 640 Query: 63 QDRLCDNLIL 72 + + + Sbjct: 641 ETLSEELESM 650 >gi|217963778|ref|YP_002349456.1| ABC transporter ATP-binding protein [Listeria monocytogenes HCC23] gi|217333048|gb|ACK38842.1| ABC transporter, ATP-binding protein [Listeria monocytogenes HCC23] gi|307571649|emb|CAR84828.1| ABC transporter, ATP-binding protein [Listeria monocytogenes L99] Length = 650 Score = 40.2 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 8/70 (11%), Positives = 29/70 (41%), Gaps = 3/70 (4%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-KEI 62 R+L + + ++++ L + +P ++Q+ +A + +E + + +E Sbjct: 583 KRKLEEVEKSM--EATDEKIAELEHQLTNPEVFQDHEKALEITQELDAVKATGEKLMEEW 640 Query: 63 QDRLCDNLIL 72 + + + Sbjct: 641 ETLSEELESM 650 >gi|118087494|ref|XP_419285.2| PREDICTED: similar to Hook-related protein 1 [Gallus gallus] Length = 1888 Score = 40.2 bits (92), Expect = 0.47, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 45/142 (31%), Gaps = 3/142 (2%) Query: 17 DNAVQRLSFLNTKT--EDPHLWQNVIEAKMLMRERQHLDNAISFIKE-IQDRLCDNLILL 73 +++ L + E L N +K LM+E++ L+ ++E ++ ++ Sbjct: 501 QRLNKKIEELEKEIVQEKQSLQDNQNLSKDLMKEKEQLEKKFETLRENLERQIKLLEQEN 560 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E + + + ++K + + E S LE E + + Sbjct: 561 ERSNQTIASLRQRSQISAEAQMKEIEKENKILHESIKETSSKLNKLEFEIKQVRKEMEHY 620 Query: 134 ANMLLRMYTRWAEKRKFKTEAL 155 R E + E Sbjct: 621 KEKAERAEELENELHHLEKENE 642 >gi|169838093|ref|ZP_02871281.1| hypothetical protein cdivTM_13518 [candidate division TM7 single-cell isolate TM7a] Length = 38 Score = 40.2 bits (92), Expect = 0.48, Method: Composition-based stats. Identities = 8/25 (32%), Positives = 14/25 (56%) Query: 331 EKTSPSDVLDGDLDDFMKATLAIKK 355 +LDGDLD+ + A +A ++ Sbjct: 2 TLHRLEGILDGDLDEMIDALIAYEQ 26 >gi|328544687|ref|YP_004304796.1| ABC transporter ATPase [polymorphum gilvum SL003B-26A1] gi|326414429|gb|ADZ71492.1| ABC transporter, ATPase subunit [Polymorphum gilvum SL003B-26A1] Length = 603 Score = 40.2 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 15/57 (26%), Gaps = 1/57 (1%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 + +L L DP L+ N L E L +E L Sbjct: 543 IEKLDAQLEKLQADMADPDLYSRNPDRFARLSAEITKLTEEKDAAEEQWLELEMLKE 599 >gi|225683891|gb|EEH22175.1| predicted protein [Paracoccidioides brasiliensis Pb03] Length = 247 Score = 40.2 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 12/113 (10%) Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 FS V +++ ++ + SG GGQ +N T+SAV++ H PTG+VV+ Sbjct: 97 RFFSHCHQLSVKQMPPRPKLNPAEVTGTYLKGSGPGGQAINKTNSAVQLIHKPTGIVVKS 156 Query: 264 QQERSQHKNKAQAWNMLRAKLYEL------------ELQKREEIANIGESSKT 304 Q RS+ +N+ A +L K+ E +K+ + ++ ++ + Sbjct: 157 QATRSRTQNQKIAMGILAEKVELHLKGDKSRAAIVAETKKKRKARSVKKARRK 209 >gi|221194820|ref|ZP_03567877.1| ABC transporter, ATP-binding protein [Atopobium rimae ATCC 49626] gi|221185724|gb|EEE18114.1| ABC transporter, ATP-binding protein [Atopobium rimae ATCC 49626] Length = 678 Score = 40.2 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 23/69 (33%), Gaps = 2/69 (2%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 ++L + A QR L D L+ + + M E L I +++ Sbjct: 608 KKRLKEVEAA--LQPAHQRYDELMALMADEDLYNDAEKFDACMAEYNALAKKIPALEQEW 665 Query: 64 DRLCDNLIL 72 L + + Sbjct: 666 LELSEKMEA 674 >gi|195488245|ref|XP_002092233.1| GE11778 [Drosophila yakuba] gi|194178334|gb|EDW91945.1| GE11778 [Drosophila yakuba] Length = 146 Score = 40.2 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 8/93 (8%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 + ESD R SG GGQ VN T + V + H+PT + V+C R KN+ +A +L Sbjct: 28 PALQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHRLASKNRVEARKLL 87 Query: 281 RAKLYEL--------ELQKREEIANIGESSKTE 305 KL K +E E + + Sbjct: 88 LEKLDVHLNGEHSIAAQVKAQEQRKSTERRRRQ 120 >gi|47095782|ref|ZP_00233387.1| ABC transporter, ATP-binding protein [Listeria monocytogenes str. 1/2a F6854] gi|224498481|ref|ZP_03666830.1| hypothetical protein LmonF1_01814 [Listeria monocytogenes Finland 1988] gi|254899229|ref|ZP_05259153.1| hypothetical protein LmonJ_05434 [Listeria monocytogenes J0161] gi|254912630|ref|ZP_05262642.1| ABC transporter [Listeria monocytogenes J2818] gi|254936957|ref|ZP_05268654.1| ABC transporter [Listeria monocytogenes F6900] gi|47015786|gb|EAL06714.1| ABC transporter, ATP-binding protein [Listeria monocytogenes str. 1/2a F6854] gi|258609559|gb|EEW22167.1| ABC transporter [Listeria monocytogenes F6900] gi|293590624|gb|EFF98958.1| ABC transporter [Listeria monocytogenes J2818] Length = 650 Score = 40.2 bits (92), Expect = 0.49, Method: Composition-based stats. Identities = 8/70 (11%), Positives = 30/70 (42%), Gaps = 6/70 (8%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFI 59 R+L + + ++++ L + +P ++Q+ ++ + +E + + + Sbjct: 583 KRKLEEIEKSM--EETDEKIAELELQLTNPEVFQDHEKSLEITQELDAVKADGEKLMEEW 640 Query: 60 KEIQDRLCDN 69 ++I + L Sbjct: 641 EQISEELESI 650 >gi|116333264|ref|YP_794791.1| ABC transporter ATPase [Lactobacillus brevis ATCC 367] gi|116098611|gb|ABJ63760.1| ATPase component of ABC transporter with duplicated ATPase domains [Lactobacillus brevis ATCC 367] Length = 650 Score = 40.2 bits (92), Expect = 0.50, Method: Composition-based stats. Identities = 8/56 (14%), Positives = 18/56 (32%), Gaps = 1/56 (1%) Query: 8 NCLGGLF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 N + +F + R+ L + DP + + + + + L S Sbjct: 85 NEMLSVFAEVRAMENRIHDLEQQMSDPTVIADTEQFQQISAAYDQLQQDFSDHNGY 140 >gi|194882555|ref|XP_001975376.1| GG20592 [Drosophila erecta] gi|190658563|gb|EDV55776.1| GG20592 [Drosophila erecta] Length = 148 Score = 40.2 bits (92), Expect = 0.51, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 8/93 (8%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 + ESD R SG GGQ VN T + V + H+PT + V+C R KN+ +A +L Sbjct: 28 PALQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHRLASKNRVEARKLL 87 Query: 281 RAKLYELE--------LQKREEIANIGESSKTE 305 KL K +E E + + Sbjct: 88 LEKLDVHLNGEHSIATQVKAQEQRKSTERRRRQ 120 >gi|13476570|ref|NP_108140.1| ABC transporter, ATP-binding component [Mesorhizobium loti MAFF303099] gi|14027332|dbj|BAB53601.1| ABC transporter, ATP-binding component [Mesorhizobium loti MAFF303099] Length = 625 Score = 40.2 bits (92), Expect = 0.51, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Query: 17 DNAVQRLSFLNTKTEDPHLW-QNVIEAKMLMRERQHLDNAISFIKE 61 D +R+ + + +P ++ ++ A L +ER L ++ +E Sbjct: 565 DRIRKRIDGIEDELANPAIYEKDPSTATRLAKERSQLAQTLAGHEE 610 >gi|319654658|ref|ZP_08008738.1| ABC transporter ATP-binding protein uup [Bacillus sp. 2_A_57_CT2] gi|317393652|gb|EFV74410.1| ABC transporter ATP-binding protein uup [Bacillus sp. 2_A_57_CT2] Length = 640 Score = 40.2 bits (92), Expect = 0.51, Method: Composition-based stats. Identities = 7/38 (18%), Positives = 15/38 (39%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53 ++L L + DP + N + +++E L Sbjct: 94 LQKQEKQLRSLEEQMADPDILNNSDAYERILKEYDKLQ 131 >gi|193599082|ref|XP_001946758.1| PREDICTED: probable peptide chain release factor C12orf65 homolog, mitochondrial-like isoform 1 [Acyrthosiphon pisum] gi|328703300|ref|XP_003242163.1| PREDICTED: probable peptide chain release factor C12orf65 homolog, mitochondrial-like [Acyrthosiphon pisum] gi|328703303|ref|XP_003242164.1| PREDICTED: probable peptide chain release factor C12orf65 homolog, mitochondrial-like [Acyrthosiphon pisum] Length = 150 Score = 40.2 bits (92), Expect = 0.51, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 3/91 (3%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 I+E++ + SG GG VN + V + H PTG+V++C + R N+ A L Sbjct: 39 PIINENELEEMFVKGSGPGGSAVNKNANCVVLKHKPTGIVIKCHESRCVEDNRKMAREKL 98 Query: 281 RAKLYELELQK---REEIANIGESSKTEIGW 308 KL +E + I E + W Sbjct: 99 AIKLDVIENGNNSVEAQKKAIIEKKNAQKEW 129 >gi|212703970|ref|ZP_03312098.1| hypothetical protein DESPIG_02023 [Desulfovibrio piger ATCC 29098] gi|212672673|gb|EEB33156.1| hypothetical protein DESPIG_02023 [Desulfovibrio piger ATCC 29098] Length = 668 Score = 40.2 bits (92), Expect = 0.52, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 29/71 (40%), Gaps = 2/71 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ L G + + A+ S + T DP ++ + + L++ L + + E Sbjct: 586 LQQKYAALEG--ELEKAMNEQSDVETLLADPAVYADGARSTELLKRFNDLRDLTERLMED 643 Query: 63 QDRLCDNLILL 73 L + + + Sbjct: 644 MAALEEQIAAI 654 >gi|301165780|emb|CBW25352.1| putative ABC transporter ATP-binding protein [Bacteriovorax marinus SJ] Length = 614 Score = 40.2 bits (92), Expect = 0.53, Method: Composition-based stats. Identities = 8/73 (10%), Positives = 27/73 (36%), Gaps = 3/73 (4%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS-FIKE 61 L ++++ L D +++ +N + + + + L R L + +E Sbjct: 533 LKKRMDELES--DIFAKEEKIDEINDQMLEASSSGDNKKISELSRNLGVLQKLLDIEYEE 590 Query: 62 IQDRLCDNLILLE 74 + + +++ Sbjct: 591 LSTITDKHEEIIQ 603 >gi|254500775|ref|ZP_05112926.1| ABC transporter, ATP-binding protein [Labrenzia alexandrii DFL-11] gi|222436846|gb|EEE43525.1| ABC transporter, ATP-binding protein [Labrenzia alexandrii DFL-11] Length = 603 Score = 40.2 bits (92), Expect = 0.53, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 20/58 (34%), Gaps = 1/58 (1%) Query: 15 DWDNAVQRLSFLNTKTEDPHLW-QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 D + +L L + DP L+ +N + L + L ++E L Sbjct: 545 DIEKIEAQLEKLQSDMNDPELYAKNPDKFAKLSAQITDLSTKKDAMEEQWLELEMLNE 602 >gi|153006316|ref|YP_001380641.1| class I peptide chain release factor [Anaeromyxobacter sp. Fw109-5] gi|152029889|gb|ABS27657.1| Class I peptide chain release factor [Anaeromyxobacter sp. Fw109-5] Length = 122 Score = 40.2 bits (92), Expect = 0.53, Method: Composition-based stats. Identities = 32/96 (33%), Positives = 40/96 (41%), Gaps = 14/96 (14%) Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 C + G GGQH N T+SAVR+ H PTGV V + RSQ +N+ A LR +L L Sbjct: 25 CEETFFVGGGPGGQHRNKTESAVRLVHRPTGVTVTATERRSQLQNREAALARLRERLGPL 84 Query: 288 EL--------------QKREEIANIGESSKTEIGWG 309 Q+R A K G Sbjct: 85 AHRPKARRPTRPTRGSQERRIAAKKRRGEKKAGRRG 120 >gi|317490594|ref|ZP_07949067.1| RF-1 domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325831509|ref|ZP_08164763.1| peptidyl-tRNA hydrolase domain protein [Eggerthella sp. HGA1] gi|316910296|gb|EFV31932.1| RF-1 domain-containing protein [Eggerthella sp. 1_3_56FAA] gi|325486763|gb|EGC89211.1| peptidyl-tRNA hydrolase domain protein [Eggerthella sp. HGA1] Length = 124 Score = 40.2 bits (92), Expect = 0.54, Method: Composition-based stats. Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%) Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 DC + +RASG GGQ VNTTDSAVR+TH+P+G+ ++ RSQ +N+ LR + Sbjct: 24 RDCDVQAFRASGPGGQCVNTTDSAVRMTHVPSGMTATSRESRSQFRNRQLCLQKLRDRFA 83 Query: 286 ELE---------------LQKREEIANIGESSKTEIGW 308 ++R +K + G Sbjct: 84 REAVPPKARRATKATRASKERRLAQKRRRSQTKAQRGR 121 >gi|260469584|ref|ZP_05813749.1| ABC transporter related protein [Mesorhizobium opportunistum WSM2075] gi|259028610|gb|EEW29921.1| ABC transporter related protein [Mesorhizobium opportunistum WSM2075] Length = 625 Score = 40.2 bits (92), Expect = 0.55, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Query: 17 DNAVQRLSFLNTKTEDPHLW-QNVIEAKMLMRERQHLDNAISFIKE 61 D +R+ + + +P ++ ++ A L +ER L ++ +E Sbjct: 565 DRIRKRIDGIEDELANPAIYEKDPSTATRLAKERSQLAQTLAGHEE 610 >gi|253699344|ref|YP_003020533.1| ABC transporter [Geobacter sp. M21] gi|251774194|gb|ACT16775.1| ABC transporter related protein [Geobacter sp. M21] Length = 648 Score = 40.2 bits (92), Expect = 0.56, Method: Composition-based stats. Identities = 6/51 (11%), Positives = 14/51 (27%), Gaps = 1/51 (1%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL-DNAISFIKEIQDR 65 L+ L P + + A++ L + S + + Sbjct: 598 IATKEGELAELEQAMAKPDFFSDHEAARIAGERHAQLTEEIASLYQAWEAA 648 >gi|46581455|ref|YP_012263.1| ABC transporter ATP-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|46450877|gb|AAS97523.1| ABC transporter, ATP-binding protein [Desulfovibrio vulgaris str. Hildenborough] gi|311235108|gb|ADP87962.1| ABC transporter related protein [Desulfovibrio vulgaris RCH1] Length = 659 Score = 40.2 bits (92), Expect = 0.56, Method: Composition-based stats. Identities = 7/61 (11%), Positives = 23/61 (37%), Gaps = 4/61 (6%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL----DNAISFIKEIQDRLCDNL 70 D + + + + DP ++ + A L++ L + + + E++ + + Sbjct: 589 DLEKLLDEQGTVEAELADPDVYADGARASALLQRFGELQAASEKLLERMGELEPVIAELE 648 Query: 71 I 71 Sbjct: 649 A 649 >gi|310792386|gb|EFQ27913.1| RF-1 domain-containing protein [Glomerella graminicola M1.001] Length = 193 Score = 39.8 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 41/75 (54%) Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +S+ + SG GGQ +N T SAV++ HIPTGVVV+ Q RS+ +N+ Sbjct: 39 HEMPPRPKPPPDSEIEESYLKGSGPGGQKINKTSSAVQLKHIPTGVVVKSQATRSRTQNR 98 Query: 274 AQAWNMLRAKLYELE 288 A +L KL +L+ Sbjct: 99 KIAREILAQKLDDLQ 113 >gi|126651230|ref|ZP_01723440.1| ABC transporter (ATP-binding protein) [Bacillus sp. B14905] gi|126592068|gb|EAZ86134.1| ABC transporter (ATP-binding protein) [Bacillus sp. B14905] Length = 551 Score = 39.8 bits (91), Expect = 0.57, Method: Composition-based stats. Identities = 8/48 (16%), Positives = 17/48 (35%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA 55 LG + A + L L + +P N + + +M+ + Sbjct: 95 EMLGAFTELQEAEKELRELEMQMGEPSCINNPEKLEQVMKIYASKSDW 142 >gi|120601374|ref|YP_965774.1| ABC transporter [Desulfovibrio vulgaris DP4] gi|120561603|gb|ABM27347.1| ABC transporter related protein [Desulfovibrio vulgaris DP4] Length = 659 Score = 39.8 bits (91), Expect = 0.58, Method: Composition-based stats. Identities = 7/61 (11%), Positives = 23/61 (37%), Gaps = 4/61 (6%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL----DNAISFIKEIQDRLCDNL 70 D + + + + DP ++ + A L++ L + + + E++ + + Sbjct: 589 DLEKLLDEQGTVEAELADPDVYADGARASALLQRFGELQAASEKLLERMGELEPVIAELE 648 Query: 71 I 71 Sbjct: 649 A 649 >gi|116328132|ref|YP_797852.1| peptidyl-tRNA hydrolase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331415|ref|YP_801133.1| peptidyl-tRNA hydrolase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120876|gb|ABJ78919.1| Peptidyl-tRNA hydrolase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125104|gb|ABJ76375.1| Peptidyl-tRNA hydrolase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 154 Score = 39.8 bits (91), Expect = 0.58, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 4/93 (4%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 +E+ E++ R+ G GGQ+VN +AV + H PTG+ V+C R+Q N+ +A Sbjct: 19 MDVLEVKENELEESFTRSGGKGGQNVNKVSTAVHLKHKPTGIEVKCSLYRTQGLNRYKAR 78 Query: 278 NMLRAKLYELELQKR----EEIANIGESSKTEI 306 +L K+ E +K+ +E N + + + Sbjct: 79 AILCEKIQEENRKKQGTVSDERKNTIRNKQKDA 111 >gi|251795070|ref|YP_003009801.1| ABC transporter [Paenibacillus sp. JDR-2] gi|247542696|gb|ACS99714.1| ABC transporter related [Paenibacillus sp. JDR-2] Length = 642 Score = 39.8 bits (91), Expect = 0.58, Method: Composition-based stats. Identities = 9/53 (16%), Positives = 17/53 (32%), Gaps = 1/53 (1%) Query: 4 SRQLNCLGGLF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA 55 + + +F A Q L L + DP L N + ++ + Sbjct: 80 RTIIEEMRAVFSHLIEAEQELRELERQIADPALHDNPKRYEDVLDRYSRKSDW 132 >gi|302670497|ref|YP_003830457.1| ABC transporter ATP-binding protein [Butyrivibrio proteoclasticus B316] gi|302394970|gb|ADL33875.1| ABC transporter ATP-binding protein [Butyrivibrio proteoclasticus B316] Length = 692 Score = 39.8 bits (91), Expect = 0.59, Method: Composition-based stats. Identities = 8/58 (13%), Positives = 21/58 (36%), Gaps = 1/58 (1%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKEIQDRLCDNLI 71 D R + + DP + ++ + + L E+ + + +S E + + Sbjct: 634 DISKLEGRDGEITEQLSDPSVGTDLAKLRKLTDEQTEIQDKLSSLYDEWEKISSELSE 691 >gi|50304901|ref|XP_452406.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49641539|emb|CAH01257.1| KLLA0C04642p [Kluyveromyces lactis] Length = 168 Score = 39.8 bits (91), Expect = 0.59, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 11/84 (13%) Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE---- 288 + G GGQ +N +S V++ H+PTG+VV CQ RS+ +N+ A L +L + E Sbjct: 54 HGGRGPGGQKINKCNSKVQLRHVPTGIVVDCQATRSRDQNRKIAREKLALRLAQWENGDQ 113 Query: 289 -------LQKREEIANIGESSKTE 305 + E+ + + K + Sbjct: 114 PIERELAKIQWEQQSKRSKERKAK 137 >gi|86159828|ref|YP_466613.1| class I peptide chain release factor [Anaeromyxobacter dehalogenans 2CP-C] gi|85776339|gb|ABC83176.1| Class I peptide chain release factor [Anaeromyxobacter dehalogenans 2CP-C] Length = 123 Score = 39.8 bits (91), Expect = 0.59, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 35/64 (54%) Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 +C + G GGQH N T+S VR+ H PT + V + RSQ +N+ A LRA+L Sbjct: 25 ECDESFFVGGGPGGQHRNKTESGVRLVHRPTEITVTATERRSQLQNRGAALERLRARLQP 84 Query: 287 LELQ 290 L + Sbjct: 85 LAHR 88 >gi|315283123|ref|ZP_07871384.1| ABC transporter, ATP-binding protein [Listeria marthii FSL S4-120] gi|313613225|gb|EFR87108.1| ABC transporter, ATP-binding protein [Listeria marthii FSL S4-120] Length = 650 Score = 39.8 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 9/68 (13%), Positives = 28/68 (41%), Gaps = 6/68 (8%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFI 59 R+L + + ++++ L + P ++Q+ +A + +E + + + Sbjct: 583 KRKLEEVEQAM--EETEEKIAELELQLTKPEVFQDHEKALEITQELDAVKADGEKLMEEW 640 Query: 60 KEIQDRLC 67 + I + L Sbjct: 641 ETISEELE 648 >gi|289613196|emb|CBI59790.1| unnamed protein product [Sordaria macrospora] Length = 250 Score = 39.8 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 42/69 (60%) Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 ++ E + + SG GGQ +N T+SAV++ HIPT +V++CQ+ RS+ +N+ Sbjct: 76 QMPPRPKLPEDELEEVYLKGSGPGGQKINKTNSAVQLRHIPTNIVIKCQETRSRTQNRKL 135 Query: 276 AWNMLRAKL 284 A +L AK+ Sbjct: 136 AREILAAKV 144 >gi|138893891|ref|YP_001124344.1| ABC transporter ATP-binding protein Uup [Geobacillus thermodenitrificans NG80-2] gi|134265404|gb|ABO65599.1| ABC transporter ATP-binding protein Uup [Geobacillus thermodenitrificans NG80-2] Length = 643 Score = 39.8 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 5/56 (8%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFIKEIQDRL 66 + + +++ + + DP ++ + + L +E ++ ++ ++ +++ L Sbjct: 588 EIETLEAQIAEVEQQLCDPSIYGDYETVQRLSQENEERKRQVEKLLAEWEQLYSSL 643 Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 5/41 (12%), Positives = 16/41 (39%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58 ++L+ L ++ DP + + + +++ L Sbjct: 96 AIEKQLAALGSQLGDPDVLADPARYEKILKAYDELQEQYKE 136 >gi|192362423|ref|YP_001984000.1| ABC transporter ATP-binding protein [Cellvibrio japonicus Ueda107] gi|190688588|gb|ACE86266.1| ABC transporter, ATP-binding protein [Cellvibrio japonicus Ueda107] Length = 630 Score = 39.8 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 29/72 (40%), Gaps = 4/72 (5%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEA--KMLMRERQHLDNAISFIK 60 L+ +L L + +RL + + D ++ + +A + L+ E+ L + + Sbjct: 558 LANKLKNLEA--QLEKLQKRLGDIESLLGDTSIYDDKNKATLQELLAEQSQLTAQLQETE 615 Query: 61 EIQDRLCDNLIL 72 E + + L Sbjct: 616 ENWLLISEELEA 627 >gi|194757281|ref|XP_001960893.1| GF13589 [Drosophila ananassae] gi|190622191|gb|EDV37715.1| GF13589 [Drosophila ananassae] Length = 141 Score = 39.8 bits (91), Expect = 0.61, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 8/107 (7%) Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266 +D S + ESD R SG GGQ VN T + V + H+PT + ++C Sbjct: 16 LRCKSTAHLDYSRYPTLQESDIEETFTRGSGPGGQAVNKTSNCVFLRHLPTNITIKCHTH 75 Query: 267 RSQHKNKAQAWNMLRAKLYEL--------ELQKREEIANIGESSKTE 305 R KN+ +A +L KL K +E E + + Sbjct: 76 RLASKNRVEARKLLLEKLDAHLNGENSIAAQIKVQEQRKSTERRRRQ 122 >gi|325110517|ref|YP_004271585.1| class I peptide chain release factor [Planctomyces brasiliensis DSM 5305] gi|324970785|gb|ADY61563.1| Class I peptide chain release factor [Planctomyces brasiliensis DSM 5305] Length = 168 Score = 39.8 bits (91), Expect = 0.63, Method: Composition-based stats. Identities = 28/72 (38%), Positives = 39/72 (54%) Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 + + E S+C + R SG GGQH N ++A+RI H PTGV Q + RSQ +N+ Sbjct: 1 MHPTELTDEKLLSECDVTRQRRSGPGGQHRNKVETAIRIEHRPTGVTGQASERRSQEENR 60 Query: 274 AQAWNMLRAKLY 285 A LR +L Sbjct: 61 KVALFRLRVELA 72 >gi|254826171|ref|ZP_05231172.1| ABC transporter [Listeria monocytogenes FSL J1-194] gi|293595411|gb|EFG03172.1| ABC transporter [Listeria monocytogenes FSL J1-194] Length = 650 Score = 39.8 bits (91), Expect = 0.64, Method: Composition-based stats. Identities = 9/68 (13%), Positives = 30/68 (44%), Gaps = 6/68 (8%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFI 59 R+L + + ++++ L + +P ++Q+ +A + +E + + + Sbjct: 583 KRKLEEVEKSM--EATDEKIAELELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEW 640 Query: 60 KEIQDRLC 67 ++I + L Sbjct: 641 EQISEELE 648 >gi|189425837|ref|YP_001953014.1| class I peptide chain release factor [Geobacter lovleyi SZ] gi|189422096|gb|ACD96494.1| Class I peptide chain release factor [Geobacter lovleyi SZ] Length = 124 Score = 39.8 bits (91), Expect = 0.64, Method: Composition-based stats. Identities = 28/78 (35%), Positives = 41/78 (52%) Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 + E + RASG GGQH+N T SAV++ H+PTG+ +C +ERSQ N+ A L Sbjct: 25 VKEEELEEQFVRASGRGGQHLNKTSSAVQVRHLPTGIEARCGRERSQSLNRFLARRELLE 84 Query: 283 KLYELELQKREEIANIGE 300 K+ E+ + Sbjct: 85 KIARHLGLVTEQDRELAR 102 >gi|221101663|ref|XP_002163246.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 159 Score = 39.8 bits (91), Expect = 0.65, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 3/106 (2%) Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + V S + + ESD + + SG GGQ +N T + V + H TG++V+CQ+ RS Sbjct: 44 IEAVEKKSDTVILKESDFQEKFIKGSGPGGQKINKTSNCVELKHDATGIIVKCQETRSLE 103 Query: 271 KNKAQAWNMLRAKLYELE---LQKREEIANIGESSKTEIGWGRQIR 313 +N+ A L KL L K+++ + + + I R++R Sbjct: 104 RNRVIARERLLEKLRFLYNPSESKQQQRLDAKQKQEKNIERKRRLR 149 >gi|261196175|ref|XP_002624491.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081] gi|239587624|gb|EEQ70267.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081] Length = 196 Score = 39.8 bits (91), Expect = 0.65, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 1/120 (0%) Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249 + + FS V ++ S+ + +G GGQ +N T+SA Sbjct: 4 WRIRPQWRQPNGILRLFSHCCRLFVKQMPPRPKLDPSEVTGSYLKGTGPGGQAINKTNSA 63 Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-YELELQKREEIANIGESSKTEIGW 308 V++ H PTG+VV+ Q RS+ +N+ A +L K+ +L+ +K K + Sbjct: 64 VQLIHKPTGIVVKSQATRSRTQNQKIAMGILAEKVELQLKGEKSRAAIKAETKRKRKASR 123 >gi|195121186|ref|XP_002005101.1| GI19248 [Drosophila mojavensis] gi|193910169|gb|EDW09036.1| GI19248 [Drosophila mojavensis] Length = 141 Score = 39.8 bits (91), Expect = 0.65, Method: Composition-based stats. Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 1/111 (0%) Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 ++ + +D S + ESD R SG GGQ VN T++ V + H+PTG Sbjct: 8 AGSLSSNLCRLASNAHLDYSRYPTLQESDIEETLMRGSGPGGQAVNKTNNCVFLRHLPTG 67 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLY-ELELQKREEIANIGESSKTEIGW 308 + V+C R KN+ +A +L KL L +K K Sbjct: 68 ITVKCHLHRLASKNRIEARKILLEKLDVHLNGEKSIAAQQKALDQKKSTER 118 >gi|254933501|ref|ZP_05266860.1| ABC transporter [Listeria monocytogenes HPB2262] gi|293585065|gb|EFF97097.1| ABC transporter [Listeria monocytogenes HPB2262] gi|332312522|gb|EGJ25617.1| ABC transporter related protein [Listeria monocytogenes str. Scott A] Length = 650 Score = 39.8 bits (91), Expect = 0.65, Method: Composition-based stats. Identities = 9/68 (13%), Positives = 30/68 (44%), Gaps = 6/68 (8%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFI 59 R+L + + ++++ L + +P ++Q+ +A + +E + + + Sbjct: 583 KRKLEEVEKSM--EATDEKIAELELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEW 640 Query: 60 KEIQDRLC 67 ++I + L Sbjct: 641 EQISEELE 648 >gi|255521638|ref|ZP_05388875.1| ABC transporter (ATP-binding protein) [Listeria monocytogenes FSL J1-175] Length = 650 Score = 39.8 bits (91), Expect = 0.67, Method: Composition-based stats. Identities = 9/68 (13%), Positives = 30/68 (44%), Gaps = 6/68 (8%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFI 59 R+L + + ++++ L + +P ++Q+ +A + +E + + + Sbjct: 583 KRKLEEVEKSM--EATDEKIAELELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEW 640 Query: 60 KEIQDRLC 67 ++I + L Sbjct: 641 EQISEELE 648 >gi|157363011|ref|YP_001469778.1| peptidoglycan-binding LysM [Thermotoga lettingae TMO] gi|157313615|gb|ABV32714.1| Peptidoglycan-binding LysM [Thermotoga lettingae TMO] Length = 573 Score = 39.8 bits (91), Expect = 0.69, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 22/56 (39%), Gaps = 2/56 (3%) Query: 16 WDNAVQRLSFLNTKTED--PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 + +RL L + + N + L +E ++N +S K++ D + Sbjct: 25 LEQINRRLDELEYRIAQIEKSTYNNQKNIEKLQQEVSKINNEVSSAKKLLDEQKNL 80 >gi|325278846|ref|YP_004251388.1| ATP-binding cassette protein, ChvD family [Odoribacter splanchnicus DSM 20712] gi|324310655|gb|ADY31208.1| ATP-binding cassette protein, ChvD family [Odoribacter splanchnicus DSM 20712] Length = 562 Score = 39.8 bits (91), Expect = 0.70, Method: Composition-based stats. Identities = 19/122 (15%), Positives = 44/122 (36%), Gaps = 2/122 (1%) Query: 1 MKLSRQLNCL--GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58 ++ + + + G+ D +A++ +N K DP + +N + L+ + L + I Sbjct: 83 LESGKTVKEIVQEGVQDIVDALKEFEEVNQKFGDPEVLENPDKLNALINRQAELQDKIDA 142 Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 + L +D + + +R+ L Q +L + +N Sbjct: 143 TDAWNLDSRLERAMDALRCPPEDQVVDTLSGGERRRVALCRLLLQQPDVLLLDEPTNHLD 202 Query: 119 LE 120 E Sbjct: 203 AE 204 >gi|226320895|ref|ZP_03796446.1| Peptide chain release factor 1 [Borrelia burgdorferi 29805] gi|226233667|gb|EEH32397.1| Peptide chain release factor 1 [Borrelia burgdorferi 29805] Length = 81 Score = 39.8 bits (91), Expect = 0.70, Method: Composition-based stats. Identities = 10/69 (14%), Positives = 30/69 (43%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 ++A ++ + K +D +L ++ + +++E +L+ + E + L + Sbjct: 6 LNSATSKIKLIEEKLQDINLIKDQKKYSKIIKEYTYLEKINTKKIEYEKILSQINDTKTI 65 Query: 76 ALEEDDCSI 84 +ED + Sbjct: 66 LEKEDQQEM 74 >gi|78224169|ref|YP_385916.1| class I peptide chain release factor [Geobacter metallireducens GS-15] gi|78195424|gb|ABB33191.1| Class I peptide chain release factor [Geobacter metallireducens GS-15] Length = 121 Score = 39.8 bits (91), Expect = 0.71, Method: Composition-based stats. Identities = 28/75 (37%), Positives = 45/75 (60%) Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 + E+ ++E+D R+SGAGGQHVN T + V+I H PTG+ V+C ++RSQ N+ Sbjct: 17 REKMTELGVAEADLEESFVRSSGAGGQHVNKTATCVQIKHRPTGIEVKCMKDRSQSVNRF 76 Query: 275 QAWNMLRAKLYELEL 289 A + ++ L+ Sbjct: 77 LARREILVRIERLQK 91 >gi|196251106|ref|ZP_03149786.1| ABC transporter-related protein [Geobacillus sp. G11MC16] gi|196209400|gb|EDY04179.1| ABC transporter-related protein [Geobacillus sp. G11MC16] Length = 554 Score = 39.8 bits (91), Expect = 0.72, Method: Composition-based stats. Identities = 5/56 (8%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFIKEIQDRL 66 + + +++ + + DP ++ + + L +E ++ ++ ++ +++ L Sbjct: 499 EIETLEAQIAEVEQQLCDPSIYGDYETVQRLSQENEERKRQVEKLLAEWEQLYSSL 554 Score = 38.2 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 5/41 (12%), Positives = 16/41 (39%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58 ++L+ L ++ DP + + + +++ L Sbjct: 7 AIEKQLAALGSQLGDPDVLADPARYEKILKAYDELQEQYKE 47 >gi|256848117|ref|ZP_05553561.1| ABC transporter ATP-binding component [Lactobacillus coleohominis 101-4-CHN] gi|256715177|gb|EEU30154.1| ABC transporter ATP-binding component [Lactobacillus coleohominis 101-4-CHN] Length = 645 Score = 39.8 bits (91), Expect = 0.72, Method: Composition-based stats. Identities = 6/57 (10%), Positives = 17/57 (29%), Gaps = 1/57 (1%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE-IQDRLCDNLI 71 D + + + DP + ++ + L +E + + +E Sbjct: 586 LDQLQAQHDQIEQQMSDPEIATDIAKLSDLQKELEQCQTEMDQAEENWTSAAEQLEE 642 >gi|119911989|ref|XP_582998.3| PREDICTED: smoothelin-like isoform 1 [Bos taurus] Length = 1072 Score = 39.8 bits (91), Expect = 0.74, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 89/330 (26%), Gaps = 35/330 (10%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDP------HLWQNVIEAKMLMRERQHLDNA 55 +L L L D VQ L+ N K D Q+ A+ L +E + L Sbjct: 390 ELQATLQELS---DQQQMVQELTAENEKLADEKTLLETSFHQHRERAEQLSQENEKLMTL 446 Query: 56 IS-------------FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 + I E++ + + L E+ Q T + Sbjct: 447 LQERVKGEEPGAQEGKILELEQKCTEILEQGRFEREKLLSIQQQLTCRLRAVEEEHRSAL 506 Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 + L LE+ +GG ++ A L + E + Sbjct: 507 ELVRHLQEVNGELTTRLELEQHSGGPTAEIPAARQLPVEGLQVENGSLQASLENEEQKTG 566 Query: 163 A---------GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 G +L L+ R + + R + + + Sbjct: 567 GASPLGPMAEGCDVQEMLTVARAEKDQLEQSCSELRQELLKAHGEVKRVSSLLAKVEKDY 626 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 I +E R A D I + Q +Q R+ + Sbjct: 627 SYLKEICDHQAEQLSRTSLKLQEKASESDAEIKDMKETIF----ELEDQVEQHRAVKLHN 682 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSK 303 Q + L + + +LE QK + + +K Sbjct: 683 NQLISELESSVMKLEEQKSDLERQLKTLTK 712 >gi|297486864|ref|XP_002695865.1| PREDICTED: smoothelin-like [Bos taurus] gi|296476629|gb|DAA18744.1| smoothelin-like [Bos taurus] Length = 1072 Score = 39.8 bits (91), Expect = 0.74, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 89/330 (26%), Gaps = 35/330 (10%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDP------HLWQNVIEAKMLMRERQHLDNA 55 +L L L D VQ L+ N K D Q+ A+ L +E + L Sbjct: 390 ELQATLQELS---DQQQMVQELTAENEKLADEKTLLETSFHQHRERAEQLSQENEKLMTL 446 Query: 56 IS-------------FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102 + I E++ + + L E+ Q T + Sbjct: 447 LQERVKGEEPGAQEGKILELEQKCTEILEQGRFEREKLLSIQQQLTCRLRAVEEEHRSAL 506 Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 + L LE+ +GG ++ A L + E + Sbjct: 507 ELVRHLQEVNGELTTRLELEQHSGGPTAEIPAARQLPVEGLQVENGSLQASLENEEQKTG 566 Query: 163 A---------GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213 G +L L+ R + + R + + + Sbjct: 567 GASPLGPMAEGCDVQEMLTVARAEKDQLEQSCSELRQELLKAHGEVKRVSSLLAKVEKDY 626 Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 I +E R A D I + Q +Q R+ + Sbjct: 627 SYLKEICDHQAEQLSRTSLKLQEKASESDAEIKDMKETIF----ELEDQVEQHRAVKLHN 682 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSK 303 Q + L + + +LE QK + + +K Sbjct: 683 NQLISELESSVMKLEEQKSDLERQLKTLTK 712 >gi|71022895|ref|XP_761677.1| hypothetical protein UM05530.1 [Ustilago maydis 521] gi|46101154|gb|EAK86387.1| hypothetical protein UM05530.1 [Ustilago maydis 521] Length = 713 Score = 39.8 bits (91), Expect = 0.74, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 37/68 (54%) Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279 + + E D R SG GGQ +N + V++TH+PTG V CQ+ RS+ +N+ A Sbjct: 597 PLTLDEKDLAEKFIRGSGPGGQAINKLSTNVQLTHLPTGTKVTCQETRSRDRNRELARRR 656 Query: 280 LRAKLYEL 287 + L +L Sbjct: 657 MSLTLEKL 664 >gi|239614579|gb|EEQ91566.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3] Length = 196 Score = 39.4 bits (90), Expect = 0.75, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 1/104 (0%) Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265 FS V ++ S+ + +G GGQ +N T+SAV++ H PTG+VV+ Q Sbjct: 20 FSHCCRLFVKQMPPRPKLDPSEVTGSYLKGTGPGGQAINKTNSAVQLIHKPTGIVVKSQA 79 Query: 266 ERSQHKNKAQAWNMLRAKL-YELELQKREEIANIGESSKTEIGW 308 RS+ +N+ A +L K+ +L+ +K K + Sbjct: 80 TRSRTQNQKIAMGILAEKVELQLKGEKSRAAIKAETKRKRKASR 123 >gi|332373588|gb|AEE61935.1| unknown [Dendroctonus ponderosae] Length = 138 Score = 39.4 bits (90), Expect = 0.76, Method: Composition-based stats. Identities = 34/100 (34%), Positives = 47/100 (47%) Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273 +D S ++E D + SG GGQ V+ T S + + HIPTG+VV+CQ+ RS +NK Sbjct: 22 HIDYSQVPALNEQDLEEKQVKGSGPGGQKVSKTSSCIVLKHIPTGIVVKCQETRSVLQNK 81 Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 A L KL + A I + G Q R Sbjct: 82 KIARLHLITKLDNTINGENSVEAQIKRLENKKRGCNEQKR 121 >gi|254853990|ref|ZP_05243338.1| ABC transporter [Listeria monocytogenes FSL R2-503] gi|300765509|ref|ZP_07075490.1| ABC transporter, ATP-binding protein [Listeria monocytogenes FSL N1-017] gi|258607379|gb|EEW19987.1| ABC transporter [Listeria monocytogenes FSL R2-503] gi|300513820|gb|EFK40886.1| ABC transporter, ATP-binding protein [Listeria monocytogenes FSL N1-017] Length = 650 Score = 39.4 bits (90), Expect = 0.77, Method: Composition-based stats. Identities = 9/68 (13%), Positives = 30/68 (44%), Gaps = 6/68 (8%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFI 59 R+L + + ++++ L + +P ++Q+ +A + +E + + + Sbjct: 583 KRKLEEVEKSM--EATDKKIAELELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEW 640 Query: 60 KEIQDRLC 67 ++I + L Sbjct: 641 EQISEELE 648 >gi|303248994|ref|ZP_07335239.1| ABC transporter related protein [Desulfovibrio fructosovorans JJ] gi|302489580|gb|EFL49520.1| ABC transporter related protein [Desulfovibrio fructosovorans JJ] Length = 665 Score = 39.4 bits (90), Expect = 0.78, Method: Composition-based stats. Identities = 7/61 (11%), Positives = 22/61 (36%), Gaps = 4/61 (6%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL----DNAISFIKEIQDRLCDNL 70 + + + + S + DP + L +E L + ++ + +++ + D Sbjct: 596 ELETLLAKQSEVEAVMADPETYAKRELFSQLSKEYGTLSHAAEELLARMAVLEEEIADLE 655 Query: 71 I 71 Sbjct: 656 A 656 >gi|254992571|ref|ZP_05274761.1| ABC transporter (ATP-binding protein) [Listeria monocytogenes FSL J2-064] Length = 650 Score = 39.4 bits (90), Expect = 0.78, Method: Composition-based stats. Identities = 9/68 (13%), Positives = 30/68 (44%), Gaps = 6/68 (8%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFI 59 R+L + + ++++ L + +P ++Q+ +A + +E + + + Sbjct: 583 KRKLEEVEKSM--EATDKKIAELELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEW 640 Query: 60 KEIQDRLC 67 ++I + L Sbjct: 641 EQISEELE 648 >gi|195382982|ref|XP_002050205.1| GJ20325 [Drosophila virilis] gi|195404316|ref|XP_002060447.1| GJ15534 [Drosophila virilis] gi|194145002|gb|EDW61398.1| GJ20325 [Drosophila virilis] gi|194156312|gb|EDW71496.1| GJ15534 [Drosophila virilis] Length = 142 Score = 39.4 bits (90), Expect = 0.78, Method: Composition-based stats. Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 2/108 (1%) Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258 ++ + +D S + ESD R SG GGQ VN T++ V + H+PTG Sbjct: 8 AGALSSNLCRLASTAHLDYSRYPSLQESDIEETLLRGSGPGGQAVNKTNNCVFLRHLPTG 67 Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELE--LQKREEIANIGESSKT 304 + V+C R KN+ +A +L KL Q + + K+ Sbjct: 68 ITVKCHLHRLASKNRIEARKILLDKLDAHLNGEQSIAAQQKVLDQKKS 115 >gi|46908309|ref|YP_014698.1| ABC transporter ATP-binding protein [Listeria monocytogenes serotype 4b str. F2365] gi|46881580|gb|AAT04875.1| ABC transporter, ATP-binding protein [Listeria monocytogenes serotype 4b str. F2365] Length = 650 Score = 39.4 bits (90), Expect = 0.78, Method: Composition-based stats. Identities = 9/68 (13%), Positives = 30/68 (44%), Gaps = 6/68 (8%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFI 59 R+L + + ++++ L + +P ++Q+ +A + +E + + + Sbjct: 583 KRKLEEVEKSM--EATDKKIAELELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEW 640 Query: 60 KEIQDRLC 67 ++I + L Sbjct: 641 EQISEELE 648 >gi|47091741|ref|ZP_00229536.1| ABC transporter, ATP-binding protein [Listeria monocytogenes str. 4b H7858] gi|226224679|ref|YP_002758786.1| ABC transporter (ATP-binding protein) [Listeria monocytogenes Clip81459] gi|47019752|gb|EAL10490.1| ABC transporter, ATP-binding protein [Listeria monocytogenes str. 4b H7858] gi|225877141|emb|CAS05853.1| Putative ABC transporter (ATP-binding protein) [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 650 Score = 39.4 bits (90), Expect = 0.78, Method: Composition-based stats. Identities = 9/68 (13%), Positives = 30/68 (44%), Gaps = 6/68 (8%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFI 59 R+L + + ++++ L + +P ++Q+ +A + +E + + + Sbjct: 583 KRKLEEVEKSM--EATDKKIAELELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEW 640 Query: 60 KEIQDRLC 67 ++I + L Sbjct: 641 EQISEELE 648 >gi|297582875|ref|YP_003698655.1| ABC transporter-like protein [Bacillus selenitireducens MLS10] gi|297141332|gb|ADH98089.1| ABC transporter related protein [Bacillus selenitireducens MLS10] Length = 642 Score = 39.4 bits (90), Expect = 0.79, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 R++ + + R+ + ++ P ++Q+ E+ L E + L +A+ + + + Sbjct: 581 RRIEEIEST--VEGHESRVEEIESELIKPEVFQDHEESARLQTELESLQDALETLMDEWE 638 Query: 65 RLCD 68 L D Sbjct: 639 ALQD 642 >gi|108805097|ref|YP_645034.1| ABC transporter-like protein [Rubrobacter xylanophilus DSM 9941] gi|108766340|gb|ABG05222.1| ABC transporter related [Rubrobacter xylanophilus DSM 9941] Length = 613 Score = 39.4 bits (90), Expect = 0.81, Method: Composition-based stats. Identities = 8/57 (14%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59 L+ +L + G + + +R++ L + L+ + ++ ++ E + L + + Sbjct: 543 LAARLVAVEG--EIEAVERRINRLEKELATADLYADGRRSREVVLEHRELKGVLERL 597 >gi|328791281|ref|XP_003251540.1| PREDICTED: peptide chain release factor 2-like [Apis mellifera] Length = 178 Score = 39.4 bits (90), Expect = 0.82, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 42/85 (49%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 ++ ESD + + G GGQ N T +A+ + H PTG+VV+C + RS +N+ A +L Sbjct: 69 PKLEESDLQEQFVKGCGPGGQATNKTSNAIVLKHKPTGLVVKCHETRSLDQNRKIARKIL 128 Query: 281 RAKLYELELQKREEIANIGESSKTE 305 +L L + + K + Sbjct: 129 LTRLDNLVNDQNSLQNQKEQLMKRD 153 >gi|260947746|ref|XP_002618170.1| hypothetical protein CLUG_01629 [Clavispora lusitaniae ATCC 42720] gi|238848042|gb|EEQ37506.1| hypothetical protein CLUG_01629 [Clavispora lusitaniae ATCC 42720] Length = 180 Score = 39.4 bits (90), Expect = 0.83, Method: Composition-based stats. Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 1/74 (1%) Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 G GGQ +N ++S V++TH PTG+VV CQ RSQ +N+ +A +L KL EL+ Sbjct: 60 KGGRGPGGQKINKSNSKVQLTHKPTGIVVTCQYSRSQEQNRKKAREILALKLEELQ-DPE 118 Query: 293 EEIANIGESSKTEI 306 I K+ + Sbjct: 119 NSRTAILNKRKSMV 132 >gi|224047486|ref|XP_002199585.1| PREDICTED: coiled-coil domain containing 88A [Taeniopygia guttata] Length = 1884 Score = 39.4 bits (90), Expect = 0.83, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 42/136 (30%), Gaps = 3/136 (2%) Query: 17 DNAVQRLSFLNTKTEDP--HLWQNVIEAKMLMRERQHLDNAISFIKE-IQDRLCDNLILL 73 ++L L + L + ++K LM+E+ L+ + ++E + ++ Sbjct: 500 QRLSKKLEELENEISQEKQSLQNSQNQSKDLMKEKAQLEKTLEALRENSERQIKLLEQEN 559 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E + + R+K + + E S LE E + + Sbjct: 560 EHLNQTVASLRQRSEISAEARMKEIEKENKILHESIKETSSKLNKLEFEKKQVRKELEHY 619 Query: 134 ANMLLRMYTRWAEKRK 149 R E + Sbjct: 620 KEKGERAEELENELHR 635 >gi|293331715|ref|NP_001169537.1| hypothetical protein LOC100383413 [Zea mays] gi|224029957|gb|ACN34054.1| unknown [Zea mays] Length = 229 Score = 39.4 bits (90), Expect = 0.83, Method: Composition-based stats. Identities = 28/66 (42%), Positives = 42/66 (63%) Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 C + T++ASG GGQH N +SAVR+ H+P G++ Q ++RSQHKN+A A + LR + Sbjct: 7 MEQCDMGTFKASGPGGQHCNKRESAVRLKHLPIGIIAQAVEDRSQHKNRASALSRLRTLI 66 Query: 285 YELELQ 290 + Sbjct: 67 ALKVRR 72 >gi|262273399|ref|ZP_06051213.1| glutathione-regulated potassium-efflux system ATP-binding protein [Grimontia hollisae CIP 101886] gi|262222377|gb|EEY73688.1| glutathione-regulated potassium-efflux system ATP-binding protein [Grimontia hollisae CIP 101886] Length = 640 Score = 39.4 bits (90), Expect = 0.85, Method: Composition-based stats. Identities = 10/78 (12%), Positives = 33/78 (42%), Gaps = 8/78 (10%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ--NVIEAKMLMRE----RQHLDNAI 56 + ++++ L + +++ + ++ +P L+ N + L+RE + L+ Sbjct: 563 IRKKIDTLDT--QLEKFSVKIADIESQLAEPSLYDASNKEKLTELLREQATAKSSLEEVE 620 Query: 57 SFIKEIQDRLCDNLILLE 74 ++Q++L + Sbjct: 621 LEWMDLQEQLEQMEAAFQ 638 >gi|322705423|gb|EFY97009.1| peptidyl-tRNA hydrolase domain protein [Metarhizium anisopliae ARSEF 23] Length = 182 Score = 39.4 bits (90), Expect = 0.87, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 49/101 (48%) Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251 RI + F+ + +++ + SG GGQ +N T+SAV+ Sbjct: 9 RIPRTHPLAALSRPFTLTALRSKNLPPRPKPPPDAEIEESFLKGSGPGGQKINKTNSAVQ 68 Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + H+PTG+VV+ Q RS+ +N+ A +L K+ +L ++ Sbjct: 69 LKHVPTGIVVKSQATRSRSQNRKHARELLAQKVDDLLHGEQ 109 >gi|260161668|emb|CAN89149.1| VP2 protein [Epizootic hemorrhagic disease virus (serotype 8 / strain CPR 3961A)] Length = 970 Score = 39.4 bits (90), Expect = 0.87, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 90/303 (29%), Gaps = 28/303 (9%) Query: 49 RQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL 108 R + ++ E + D + + +++ ++ ++ +K EY+ Sbjct: 57 RNVFERTVNS--EYRISFPDAINYGIMRYDDEHERYNEKNLMLVEGLKPIGEYEIMLRTS 114 Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK-- 166 Y +A S ++ +LR+++++ E KF E D + Sbjct: 115 VKHQRIKPEYGTQNARI----SFLFSGGILRVHSKFVESLKFDVINYEKEDCDHTDWDAH 170 Query: 167 -SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225 G LV I +++ + V PV I Sbjct: 171 YDMIQRGAVMIGSGTCYDLLKQLELVVIGDIRLSTQERRHLITNQVIPVGTPEITNREPY 230 Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 D + G + + R G+ V+ ER + + + Sbjct: 231 KDKQTKVRAQQGPRFNELKQNIFSCR-----YGLEVK-HVERLHDDPIISRLDEIADEWM 284 Query: 286 ELELQKR--------EEIANIGESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSP 335 + +R E ++++T G ++R Y + +VK T E + Sbjct: 285 RRQSSERIEEICDLLEAKGKEVKTARTNAEYYRGARVRLYNVLKQNLVK---TTDEIRNI 341 Query: 336 SDV 338 V Sbjct: 342 RGV 344 >gi|197123884|ref|YP_002135835.1| class I peptide chain release factor [Anaeromyxobacter sp. K] gi|196173733|gb|ACG74706.1| Class I peptide chain release factor [Anaeromyxobacter sp. K] Length = 128 Score = 39.4 bits (90), Expect = 0.87, Method: Composition-based stats. Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 16/98 (16%) Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 +C + G GGQH N T+S VR+ H PT + V + RSQ +N+ A LRA+L Sbjct: 30 ECDESFFVGGGPGGQHRNKTESGVRLVHRPTAITVTATERRSQLQNRGAALERLRARLQP 89 Query: 287 L---------------ELQKREEIANIGESSK-TEIGW 308 L ++R K + GW Sbjct: 90 LAHRPKPRRPTKPTRGAKERRLSEKKRRGERKASRRGW 127 >gi|331270393|ref|YP_004396885.1| ABC transporter-like protein [Clostridium botulinum BKT015925] gi|329126943|gb|AEB76888.1| ABC transporter related protein [Clostridium botulinum BKT015925] Length = 637 Score = 39.4 bits (90), Expect = 0.88, Method: Composition-based stats. Identities = 7/61 (11%), Positives = 24/61 (39%), Gaps = 6/61 (9%) Query: 6 QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER----QHLDNAISFIKE 61 ++ L D + + + L K ++ + +++ + +E L+ + +E Sbjct: 578 RVKNLEQ--DIASLEKDIEELQQKLCLEEIYSDPNKSEEVNKELLTKENELELLYTSWEE 635 Query: 62 I 62 + Sbjct: 636 L 636 >gi|257784522|ref|YP_003179739.1| ABC transporter-like protein [Atopobium parvulum DSM 20469] gi|257473029|gb|ACV51148.1| ABC transporter related [Atopobium parvulum DSM 20469] Length = 672 Score = 39.4 bits (90), Expect = 0.88, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 25/71 (35%), Gaps = 2/71 (2%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + ++L+ + A +R L D L+ + + M E Q L I ++ Sbjct: 600 ETKKRLDEVEAA--LTPAHKRYDELMALMADEALYNDQQKFDECMTEYQALSKKIPALEA 657 Query: 62 IQDRLCDNLIL 72 L + + Sbjct: 658 EWLELSEKMEA 668 >gi|197117086|ref|YP_002137513.1| ABC transporter ATP-binding protein [Geobacter bemidjiensis Bem] gi|197086446|gb|ACH37717.1| ABC transporter, ATP-binding protein [Geobacter bemidjiensis Bem] Length = 648 Score = 39.4 bits (90), Expect = 0.89, Method: Composition-based stats. Identities = 6/48 (12%), Positives = 14/48 (29%), Gaps = 1/48 (2%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL-DNAISFIKEIQDR 65 L+ L P + + A++ L + S + + Sbjct: 601 KEGELAELEQAMAAPDFFSDHEAARLAGERHAQLTEEIASLYQAWESA 648 >gi|254516546|ref|ZP_05128605.1| ABC transporter, ATP-binding protein [gamma proteobacterium NOR5-3] gi|219674969|gb|EED31336.1| ABC transporter, ATP-binding protein [gamma proteobacterium NOR5-3] Length = 632 Score = 39.4 bits (90), Expect = 0.92, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 5/56 (8%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQH----LDNAISFIKEIQDR 65 + + R S L T DP ++ + E K L+ E L++ I E+++R Sbjct: 576 EIEALESRQSELETLCADPAFYERDAEEVKDLLAELSDIAPTLESKIERWTELEER 631 >gi|220918650|ref|YP_002493954.1| Class I peptide chain release factor [Anaeromyxobacter dehalogenans 2CP-1] gi|219956504|gb|ACL66888.1| Class I peptide chain release factor [Anaeromyxobacter dehalogenans 2CP-1] Length = 123 Score = 39.4 bits (90), Expect = 0.92, Method: Composition-based stats. Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 16/98 (16%) Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 +C + G GGQH N T+S VR+ H PT + V + RSQ +N+ A LRA+L Sbjct: 25 ECDESFFVGGGPGGQHRNKTESGVRLVHRPTAITVTATERRSQLQNRGAALERLRARLQP 84 Query: 287 L---------------ELQKREEIANIGESSK-TEIGW 308 L ++R K + GW Sbjct: 85 LAHRPKPRRPTRPTRGAKERRLTEKKRRGERKASRRGW 122 >gi|261418563|ref|YP_003252245.1| ABC transporter [Geobacillus sp. Y412MC61] gi|297528591|ref|YP_003669866.1| ABC transporter [Geobacillus sp. C56-T3] gi|319765377|ref|YP_004130878.1| ABC transporter [Geobacillus sp. Y412MC52] gi|261375020|gb|ACX77763.1| ABC transporter related protein [Geobacillus sp. Y412MC61] gi|297251843|gb|ADI25289.1| ABC transporter related protein [Geobacillus sp. C56-T3] gi|317110243|gb|ADU92735.1| ABC transporter related protein [Geobacillus sp. Y412MC52] Length = 641 Score = 39.4 bits (90), Expect = 0.95, Method: Composition-based stats. Identities = 5/40 (12%), Positives = 15/40 (37%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58 ++L+ L+ + DP + + + ++ L Sbjct: 97 LEKQLAELSMQLGDPDVLADPARYEKTLKTYDELQEQYKE 136 Score = 37.9 bits (86), Expect = 2.6, Method: Composition-based stats. Identities = 7/64 (10%), Positives = 28/64 (43%), Gaps = 6/64 (9%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFIKEI 62 L+ + + +++ + + DP ++ + + L +E +Q ++ ++ +++ Sbjct: 580 LDEIEA--EIAALEAQIAEIEQQLCDPSVYGDYETMQRLTQENDERKQRVEMLLAEWEQL 637 Query: 63 QDRL 66 L Sbjct: 638 YTSL 641 >gi|54020851|ref|NP_001005671.1| ribosome binding protein 1 homolog 180kDa [Xenopus (Silurana) tropicalis] gi|49250498|gb|AAH74706.1| ribosome binding protein 1 homolog 180kDa (dog) [Xenopus (Silurana) tropicalis] Length = 1037 Score = 39.4 bits (90), Expect = 0.95, Method: Composition-based stats. Identities = 32/302 (10%), Positives = 84/302 (27%), Gaps = 18/302 (5%) Query: 19 AVQRLSFLNTKTED-----PHLWQNVIEAKMLMRERQHLDNAISFIK-EIQDRLCDNLIL 72 +RL +N + +L + +AK + L + + E + + + L Sbjct: 581 LQKRLDEVNEELRKSQSTYQNLLADTEKAKAEQKNHADLQTKLQSYEAESKQKSEELDKL 640 Query: 73 LEL-----ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 + ++ L+ + + K+ + EA++ + + Sbjct: 641 NKQLQGVSGENSQLMERIKSIEALLEAGQNKDTDKEKQQQEVREAETAQLQIRLQEKDSH 700 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187 S + L+ + + E G+ T K ++ + Sbjct: 701 IASLEKETSELKEAVEQQKNKNNDLREKNWQAMEALGLSEKTSE---EKLNSEKKAKEEM 757 Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247 + + + + I + P S ++ + + GG + Sbjct: 758 VQQLNAVQIQTKETLQLLYPQITIEPQQSYSEWLQEFRQRTTEFLSQPTEKGGSSESQLK 817 Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL---QKREEIANIGESSKT 304 + + +C+Q R+ L+ + E E K S + Sbjct: 818 LK-EAEDTQSALQTECEQYRTILGETEAMLKALQKSVEEEEQVWKAKLAASEEDLSKSHS 876 Query: 305 EI 306 ++ Sbjct: 877 QV 878 >gi|39995653|ref|NP_951604.1| peptidyl-tRNA hydrolase domain-containing protein [Geobacter sulfurreducens PCA] gi|39982416|gb|AAR33877.1| peptidyl-tRNA hydrolase domain protein [Geobacter sulfurreducens PCA] gi|298504676|gb|ADI83399.1| peptidyl-tRNA hydrolase-related protein [Geobacter sulfurreducens KN400] Length = 126 Score = 39.4 bits (90), Expect = 0.95, Method: Composition-based stats. Identities = 30/73 (41%), Positives = 44/73 (60%) Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 D E+ +SE+D R+SGAGGQHVN T + V+I H PTG+ V+C ++RSQ N+ Sbjct: 17 RDKMAELGVSEADLEETFVRSSGAGGQHVNKTATCVQIRHRPTGIEVKCMKDRSQSVNRF 76 Query: 275 QAWNMLRAKLYEL 287 A + ++ L Sbjct: 77 LARREILERIERL 89 >gi|56418775|ref|YP_146093.1| ABC transporter ATP-binding protein [Geobacillus kaustophilus HTA426] gi|56378617|dbj|BAD74525.1| ABC transporter (ATP-binding protein) [Geobacillus kaustophilus HTA426] Length = 641 Score = 39.4 bits (90), Expect = 0.95, Method: Composition-based stats. Identities = 5/40 (12%), Positives = 15/40 (37%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58 ++L+ L+ + DP + + + ++ L Sbjct: 97 LEKQLAELSMQLGDPDVLADPARYEKTLKTYDELQEQYKE 136 Score = 37.5 bits (85), Expect = 3.5, Method: Composition-based stats. Identities = 7/64 (10%), Positives = 28/64 (43%), Gaps = 6/64 (9%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFIKEI 62 L+ + + +++ + + DP ++ + + L +E +Q ++ ++ +++ Sbjct: 580 LDEIEA--EIATLEAQIAEIEQQLCDPSVYGDYETMQRLTQENDERKQRVEMLLAEWEQL 637 Query: 63 QDRL 66 L Sbjct: 638 YTSL 641 >gi|218191159|gb|EEC73586.1| hypothetical protein OsI_08052 [Oryza sativa Indica Group] Length = 1667 Score = 39.4 bits (90), Expect = 0.97, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 1/54 (1%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 D N RL T+ W+ E K + +E+ L + ++ + R+ D Sbjct: 1437 DKKNLHDRLHEAETQLSQFKAWK-REELKKITKEKNALAERLKGVEASRKRVDD 1489 >gi|189196084|ref|XP_001934380.1| peptidyl-tRNA hydrolase domain containing protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187980259|gb|EDU46885.1| peptidyl-tRNA hydrolase domain containing protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 175 Score = 39.0 bits (89), Expect = 0.99, Method: Composition-based stats. Identities = 28/72 (38%), Positives = 45/72 (62%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 + + +SD + + SG GGQ +N T SAV++ HIPTG+VV+ Q RS+ N+ A Sbjct: 25 PPRVPLPDSDLIENFLKGSGPGGQKINKTSSAVQLKHIPTGIVVKYQDTRSREINRKMAR 84 Query: 278 NMLRAKLYELEL 289 +L+ ++ EL+L Sbjct: 85 RILQDRIEELQL 96 >gi|332701466|ref|ZP_08421554.1| ABC transporter related protein [Desulfovibrio africanus str. Walvis Bay] gi|332551615|gb|EGJ48659.1| ABC transporter related protein [Desulfovibrio africanus str. Walvis Bay] Length = 659 Score = 39.0 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 6/55 (10%), Positives = 21/55 (38%), Gaps = 4/55 (7%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN----AISFIKEIQDRL 66 + + LN + P L+ + + + +++ A++ +E++ Sbjct: 591 IEALETEQAELNARLSSPGLYSDPQSVQKVQARMAEIESGLDRALARWEELESAQ 645 >gi|46125917|ref|XP_387512.1| hypothetical protein FG07336.1 [Gibberella zeae PH-1] Length = 189 Score = 39.0 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 41/63 (65%) Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284 ES+ + SG GGQ +N T+SAV++ H+PTG+VV+ Q RS+ +N+ A +L ++ Sbjct: 44 ESEIEESYVKGSGPGGQKINKTNSAVQLKHVPTGIVVKSQATRSRDQNRKHARELLAQRV 103 Query: 285 YEL 287 EL Sbjct: 104 DEL 106 >gi|149179343|ref|ZP_01857902.1| hypothetical protein PM8797T_29083 [Planctomyces maris DSM 8797] gi|148841815|gb|EDL56219.1| hypothetical protein PM8797T_29083 [Planctomyces maris DSM 8797] Length = 179 Score = 39.0 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 33/60 (55%) Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285 +C+I+ R SG GGQH N ++ V I HIPT + + R Q +N++ A LR L Sbjct: 27 KNCQIEQVRRSGPGGQHRNKVETGVVIKHIPTNFTGEASERRQQGRNRSMALFRLRVNLA 86 >gi|327438491|dbj|BAK14856.1| ATPase component of ABC transporters with duplicated ATPase domains [Solibacillus silvestris StLB046] Length = 646 Score = 39.0 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 1/77 (1%) Query: 8 NCLGGLF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + + +F + N Q L L + DP ++++ + +M E L + Q Sbjct: 85 DEMMTIFANLQNQEQTLRQLEQQMADPAIYEDSEQYARIMAEYDQLQHDFKDAGGYQYEA 144 Query: 67 CDNLILLELALEEDDCS 83 +L + +D Sbjct: 145 DTRSVLHGMQFFPEDYQ 161 >gi|167761759|ref|ZP_02433886.1| hypothetical protein BACSTE_00097 [Bacteroides stercoris ATCC 43183] gi|167700395|gb|EDS16974.1| hypothetical protein BACSTE_00097 [Bacteroides stercoris ATCC 43183] Length = 656 Score = 39.0 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 10/74 (13%), Positives = 26/74 (35%), Gaps = 5/74 (6%) Query: 2 KLSRQLNCLGGLF-----DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56 +L+++L L + + +S L K P ++ + + + LD+ + Sbjct: 582 ELNKRLKKLERRVADCEAEIEQTEAAISILEAKMATPEGASDMALYEQHQKLKAQLDSVM 641 Query: 57 SFIKEIQDRLCDNL 70 + L + Sbjct: 642 EEWDAVSCELEEAR 655 >gi|85860191|ref|YP_462393.1| peptide chain release factor [Syntrophus aciditrophicus SB] gi|85723282|gb|ABC78225.1| peptide chain release factor [Syntrophus aciditrophicus SB] Length = 136 Score = 39.0 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 31/85 (36%), Positives = 46/85 (54%) Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 + ISE D R R+SG GGQ+VN T + V + H+PTG+ V+CQQ+RSQ N+ Sbjct: 13 QRMARLGISEDDLRETFIRSSGPGGQNVNKTATCVYLVHLPTGLSVKCQQDRSQTVNRLL 72 Query: 276 AWNMLRAKLYELELQKREEIANIGE 300 A +L ++ L+ + E Sbjct: 73 ARRLLLDRIERLKTGRIAAEKARIE 97 >gi|256422750|ref|YP_003123403.1| ABC transporter [Chitinophaga pinensis DSM 2588] gi|256037658|gb|ACU61202.1| ABC transporter related [Chitinophaga pinensis DSM 2588] Length = 667 Score = 39.0 bits (89), Expect = 1.0, Method: Composition-based stats. Identities = 7/60 (11%), Positives = 21/60 (35%), Gaps = 1/60 (1%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-KEIQDRLCDNLILLE 74 ++ + + T +P ++ + + + L E L + +E + + L Sbjct: 607 LAKLNEKKATIETAMNNPDVYADRKKFQQLEAEYNQLGKELKQATEEYEKVFEILMELEN 666 >gi|320037150|gb|EFW19088.1| hypothetical protein CPSG_04634 [Coccidioides posadasii str. Silveira] Length = 172 Score = 39.0 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 1/93 (1%) Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 I ES+ + SG GGQ +N T SAV++ H+PT VV+ Q RS+ +N+ Sbjct: 36 QMPPRPTIDESEITGTYLKGSGPGGQKINKTSSAVQLIHLPTNTVVKSQATRSRSQNRKI 95 Query: 276 AWNMLRAKLYELEL-QKREEIANIGESSKTEIG 307 A +L K+ L+ + K + Sbjct: 96 ALQILAEKVELLQKGDESRAAIVAETKRKRKAS 128 >gi|195426674|ref|XP_002061432.1| GK20726 [Drosophila willistoni] gi|194157517|gb|EDW72418.1| GK20726 [Drosophila willistoni] Length = 167 Score = 39.0 bits (89), Expect = 1.1, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 2/93 (2%) Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 IE ESD R SG GGQ VN T + V + H+PT + ++C R KN+ Sbjct: 47 NPLEIEFSFKESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNLTIKCHTHRLASKNRI 106 Query: 275 QAWNMLRAKLYELELQKR--EEIANIGESSKTE 305 +A +L KL E + E K+ Sbjct: 107 EARKLLLEKLDEHLNGENSIAAQIKGQEQRKSL 139 >gi|300676892|gb|ADK26764.1| coiled-coil domain containing 88A [Zonotrichia albicollis] Length = 1881 Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 18/142 (12%), Positives = 44/142 (30%), Gaps = 3/142 (2%) Query: 17 DNAVQRLSFLNTKTEDP--HLWQNVIEAKMLMRERQHLDNAISFIKE-IQDRLCDNLILL 73 ++L L + L + ++K L++E+ L+ + ++E + ++ Sbjct: 500 QRLNKKLEELENEISQEKQSLQNSQNQSKDLLKEKAQLEKTLEALRENSERQIKLLEQEN 559 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E + + R+K + + E S +E E + + Sbjct: 560 EHLNQTVASLRQRSQISAEARMKEIEKENKILHESIKETSSKLNKMEFEKKQVRKELEHY 619 Query: 134 ANMLLRMYTRWAEKRKFKTEAL 155 R E + + E Sbjct: 620 KEKGERAEELENELHRLEKENE 641 >gi|85708088|ref|ZP_01039154.1| ABC transporter [Erythrobacter sp. NAP1] gi|85689622|gb|EAQ29625.1| ABC transporter [Erythrobacter sp. NAP1] Length = 604 Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 20/65 (30%), Gaps = 11/65 (16%) Query: 15 DWDNAVQRLSFLNT-------KTEDPH-LWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 D++ R+ L DP + + + L+NA E ++R Sbjct: 539 DYEQLPARIEELEAAIAKAEGILADPDLFASDPQRFATISK---GLENARRQKDEAEERW 595 Query: 67 CDNLI 71 D Sbjct: 596 LDIAE 600 >gi|254785803|ref|YP_003073232.1| ABC transporter [Teredinibacter turnerae T7901] gi|237684364|gb|ACR11628.1| ABC transporter [Teredinibacter turnerae T7901] Length = 632 Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 10/78 (12%), Positives = 31/78 (39%), Gaps = 3/78 (3%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQHLDNAISFIKEI 62 ++++ L ++L + ++ DP ++ + E L++ + L + I+ Sbjct: 557 NKRIKQLEQ--KLSKTTEKLEKVESRLADPDIYDGDGAELSELLKTQATLKQEVDDIELA 614 Query: 63 QDRLCDNLILLELALEED 80 + LE ++ + Sbjct: 615 WMEESEAKEALEASIRAE 632 >gi|78486102|ref|YP_392027.1| ABC transporter related [Thiomicrospira crunogena XCL-2] gi|78364388|gb|ABB42353.1| ABC transporter ATP-binding protein homolog [Thiomicrospira crunogena XCL-2] Length = 642 Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 21/57 (36%), Gaps = 5/57 (8%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER----QHLDNAISFIKEIQDRLCD 68 + Q L LN + P +Q + ++ L+ A ++++ L D Sbjct: 587 IETLEQELEKLNVQMSAPDFYQ-QENTQAVIDRLNTCESELEAAFERWEKLEALLND 642 >gi|45201377|ref|NP_986947.1| AGR281Cp [Ashbya gossypii ATCC 10895] gi|44986311|gb|AAS54771.1| AGR281Cp [Ashbya gossypii ATCC 10895] Length = 176 Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 9/81 (11%) Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-------- 284 + G GGQ +N +S V++ H+P+G+V++CQ RS+ +N+ A L A L Sbjct: 59 HGGRGPGGQKINKCNSKVQLRHVPSGIVIECQATRSREQNRKLAREKLAAALAQPPGSAS 118 Query: 285 -YELELQKREEIANIGESSKT 304 EL L+ ++ K+ Sbjct: 119 ERELALRTWARQGKHAQARKS 139 >gi|226293278|gb|EEH48698.1| hypothetical protein PADG_04777 [Paracoccidioides brasiliensis Pb18] Length = 177 Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 49/101 (48%) Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 FS V +++ ++ + SG GGQ +N T+SAV++ H PTG+VV+ Sbjct: 25 RFFSHCHQLSVKQMPPRPKLNPAEVTGTYLKGSGPGGQAINKTNSAVQLIHKPTGIVVKS 84 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 Q RS+ +N+ A +L K+ + A + E+ K Sbjct: 85 QATRSRTQNQKIAMGILAEKVELHLKGDKSRAAIVAETKKK 125 >gi|283853147|ref|ZP_06370401.1| ABC transporter related protein [Desulfovibrio sp. FW1012B] gi|283571486|gb|EFC19492.1| ABC transporter related protein [Desulfovibrio sp. FW1012B] Length = 658 Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 6/61 (9%), Positives = 22/61 (36%), Gaps = 4/61 (6%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL----DNAISFIKEIQDRLCDNL 70 + + + + + DP + L +E L ++ ++ + +++ + D Sbjct: 589 ELEALLAKQGEVEATMADPETYAQKELFSTLSKEYGALSHAAEDLLARMAVLEEEIGDLE 648 Query: 71 I 71 Sbjct: 649 A 649 >gi|154483682|ref|ZP_02026130.1| hypothetical protein EUBVEN_01386 [Eubacterium ventriosum ATCC 27560] gi|149735592|gb|EDM51478.1| hypothetical protein EUBVEN_01386 [Eubacterium ventriosum ATCC 27560] Length = 656 Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats. Identities = 10/51 (19%), Positives = 22/51 (43%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71 RL+ L+ DP + N + + +E+ + + + + + L D L Sbjct: 606 DRLNELDELLADPAVSTNSAKLNEISKEQNEISERLDELMDQWEILSDQLD 656 >gi|292492579|ref|YP_003528018.1| ABC transporter [Nitrosococcus halophilus Nc4] gi|291581174|gb|ADE15631.1| ABC transporter related protein [Nitrosococcus halophilus Nc4] Length = 635 Score = 38.6 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 11/73 (15%), Positives = 27/73 (36%), Gaps = 9/73 (12%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++L+ + G + S L+ + P L+Q+ + +E L + + Sbjct: 560 LQKKLDEIEGT--LEKLQAEKSTLDQELAHPDLYQDPQQ-----KEH--LKALLMKQARL 610 Query: 63 QDRLCDNLILLEL 75 + L + + Sbjct: 611 EQTLIETEEAWLM 623 >gi|227510674|ref|ZP_03940723.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227189795|gb|EEI69862.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 652 Score = 38.6 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 30/73 (41%), Gaps = 6/73 (8%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER----QHLDNAIS 57 KL+R++ L D + + + + P ++ ++ +A L ++ Q + S Sbjct: 582 KLNREVTDLES--QLDELSKSKNNIENQMAQPEVFNDLDKASDLQKKLEMVDQEIKETES 639 Query: 58 FIKEIQDRLCDNL 70 ++ +L D Sbjct: 640 KWEQKSLQLEDIE 652 >gi|149245034|ref|XP_001527051.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146449445|gb|EDK43701.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 172 Score = 38.6 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 9/81 (11%) Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE---- 288 + SG GGQ +N T+S V++TH PTG+VV CQ+ RSQ +N+ +A +L KL +++ Sbjct: 43 HGGSGPGGQKINKTNSKVQLTHKPTGIVVSCQESRSQDQNRKKAREILALKLEDIQNPQG 102 Query: 289 -----LQKREEIANIGESSKT 304 L++R + K Sbjct: 103 SRNTILKERAQTVKANRMKKA 123 >gi|300676795|gb|ADK26671.1| coiled-coil domain containing 88A [Zonotrichia albicollis] Length = 1881 Score = 38.6 bits (88), Expect = 1.3, Method: Composition-based stats. Identities = 18/142 (12%), Positives = 44/142 (30%), Gaps = 3/142 (2%) Query: 17 DNAVQRLSFLNTKTEDP--HLWQNVIEAKMLMRERQHLDNAISFIKE-IQDRLCDNLILL 73 ++L L + L + ++K L++E+ L+ + ++E + ++ Sbjct: 500 QRLNKKLEELENEISQEKQSLQNSQNQSKDLLKEKAQLEKTLEALRENSERQIKLLEQEN 559 Query: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133 E + + R+K + + E S +E E + + Sbjct: 560 EHLNQTVASLRQRSQISAEARMKEIEKENKILHESIKETSSKLNKMEFEKKQVRKELEHY 619 Query: 134 ANMLLRMYTRWAEKRKFKTEAL 155 R E + + E Sbjct: 620 KEKGERAEELENELHRLEKENE 641 >gi|326391034|ref|ZP_08212582.1| glycosyltransferase 36 [Thermoanaerobacter ethanolicus JW 200] gi|325992902|gb|EGD51346.1| glycosyltransferase 36 [Thermoanaerobacter ethanolicus JW 200] Length = 2888 Score = 38.6 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 14/126 (11%), Positives = 44/126 (34%), Gaps = 8/126 (6%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRL--SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58 ++L++ L + D + + + + LN KT P W+ + + + ++ + Sbjct: 1154 IELAKGLKDTIKMLDIEGITEDIFRNILNKKTLMPSDWE--VFLSKISEKLSSTEDEVGN 1211 Query: 59 IKEIQDRL----CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114 I+ +++ + + L ++ + + + K+ E + Sbjct: 1212 IERLKNIIGALKREMKEFLAWTEFDERQKEQEIFKRYKEVFEEHSSPKELEKVYKNYLLE 1271 Query: 115 NDAYLE 120 + E Sbjct: 1272 IEEVFE 1277 >gi|149640804|ref|XP_001509593.1| PREDICTED: similar to Hook-related protein 1 isoform 2 [Ornithorhynchus anatinus] Length = 1880 Score = 38.6 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 21/170 (12%), Positives = 51/170 (30%), Gaps = 11/170 (6%) Query: 2 KLSRQLNCLGG----LFDWDN----AVQRLSFLNTKTEDP--HLWQNVIEAKMLMRERQH 51 +L + + G + + ++L L + L + +K LM+E+ Sbjct: 477 ELRSSVGSVEGNNSKILKLEKENQRLSKKLEGLENEISQEKQSLQNSQNLSKDLMKEKAQ 536 Query: 52 LDNAISFIKE-IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L+ + ++E + ++ E + + R+K + + Sbjct: 537 LEKTVETLRENSERQIKILEQENEHLNQTVTSLRQRSQISAEARMKDIEKENKILHESIK 596 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 E S +E E + + R E + + E + Sbjct: 597 ETSSKLNKIEFEKRQVRKELEHFKEKGERAEELENELHRLEKENESLQKK 646 >gi|149640806|ref|XP_001509508.1| PREDICTED: similar to Hook-related protein 1 isoform 1 [Ornithorhynchus anatinus] Length = 1853 Score = 38.6 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 21/170 (12%), Positives = 51/170 (30%), Gaps = 11/170 (6%) Query: 2 KLSRQLNCLGG----LFDWDN----AVQRLSFLNTKTEDP--HLWQNVIEAKMLMRERQH 51 +L + + G + + ++L L + L + +K LM+E+ Sbjct: 477 ELRSSVGSVEGNNSKILKLEKENQRLSKKLEGLENEISQEKQSLQNSQNLSKDLMKEKAQ 536 Query: 52 LDNAISFIKE-IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L+ + ++E + ++ E + + R+K + + Sbjct: 537 LEKTVETLRENSERQIKILEQENEHLNQTVTSLRQRSQISAEARMKDIEKENKILHESIK 596 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160 E S +E E + + R E + + E + Sbjct: 597 ETSSKLNKIEFEKRQVRKELEHFKEKGERAEELENELHRLEKENESLQKK 646 >gi|256045469|ref|ZP_05448355.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str. Rev.1] Length = 128 Score = 38.6 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 11/76 (14%), Positives = 29/76 (38%), Gaps = 5/76 (6%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R S + ++ + P + L E L + + I+E+ D + L + Sbjct: 23 DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 78 Query: 76 ALEEDDCSILQETSDN 91 + + ++ + Sbjct: 79 RDDASTDAEMRALAVE 94 >gi|295666315|ref|XP_002793708.1| hypothetical protein PAAG_04618 [Paracoccidioides brasiliensis Pb01] gi|226278002|gb|EEH33568.1| hypothetical protein PAAG_04618 [Paracoccidioides brasiliensis Pb01] Length = 175 Score = 38.6 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 49/101 (48%) Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263 FS V +++ ++ + SG GGQ +N T+SAV++ H PTG+VV+ Sbjct: 25 RFFSHCHQLSVKQMPPRPKLNPAEITGTYLKGSGPGGQAINKTNSAVQLIHKPTGIVVKS 84 Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304 Q RS+ +N+ A +L K+ + A + E+ K Sbjct: 85 QATRSRTQNQKIAMGILAEKVELHLKGDKSRAAIVAETKKK 125 >gi|218260605|ref|ZP_03475832.1| hypothetical protein PRABACTJOHN_01496 [Parabacteroides johnsonii DSM 18315] gi|218224451|gb|EEC97101.1| hypothetical protein PRABACTJOHN_01496 [Parabacteroides johnsonii DSM 18315] Length = 562 Score = 38.6 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 17/122 (13%), Positives = 43/122 (35%), Gaps = 2/122 (1%) Query: 1 MKLSRQLNCL--GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58 ++ + + + G+ D + ++ +N K DP + ++ + L+ + L + I Sbjct: 83 LEPGKTVKEIVQEGVQDIVDTLKEYEEVNEKFGDPEVLEDPDKMDALINRQAELQDKIDA 142 Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 + L +D + + +R+ L Q +L + +N Sbjct: 143 TDAWNLDSRLERAMDALRCPPEDQVVDTLSGGERRRVALCRLLLQQPDVLLLDEPTNHLD 202 Query: 119 LE 120 E Sbjct: 203 AE 204 >gi|313622946|gb|EFR93247.1| ABC transporter, ATP-binding protein [Listeria innocua FSL J1-023] Length = 650 Score = 38.6 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 8/68 (11%), Positives = 29/68 (42%), Gaps = 6/68 (8%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFI 59 R+L + + ++++ L + P ++Q+ +A + +E + + + Sbjct: 583 KRKLEEVEKSM--EETDEKIAELELQLTKPEIFQDHEKAFEITQELDVVKARGEKLMEEW 640 Query: 60 KEIQDRLC 67 +++ + L Sbjct: 641 EKVSEELE 648 >gi|313676944|ref|YP_004054940.1| ABC transporter related protein [Marivirga tractuosa DSM 4126] gi|312943642|gb|ADR22832.1| ABC transporter related protein [Marivirga tractuosa DSM 4126] Length = 561 Score = 38.6 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 7/46 (15%), Positives = 18/46 (39%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 N ++ +N K DP + N + L+ ++ + + + Sbjct: 101 NLLKEFEEINEKFADPEVLDNPDKMNDLIEQQAKVQEKLDHANAWE 146 >gi|223042066|ref|ZP_03612242.1| ABC transporter ATP-binding protein [Actinobacillus minor 202] gi|223017141|gb|EEF15577.1| ABC transporter ATP-binding protein [Actinobacillus minor 202] Length = 639 Score = 38.6 bits (88), Expect = 1.4, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 27/75 (36%), Gaps = 5/75 (6%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLMRERQHLDNAISFIK 60 L +++ L D D A +L+ L ++ +N + + ++ + I+ Sbjct: 565 LRKKITQLEK--DLDKASSQLAELEALLASSEIYEAENKAKLTETLAKQVEAKQKVEQIE 622 Query: 61 -EIQDRLCDNLILLE 74 E + +L Sbjct: 623 MEWLEAQEQLEAMLN 637 >gi|324521421|gb|ADY47851.1| Peptide chain release factor [Ascaris suum] Length = 141 Score = 38.6 bits (88), Expect = 1.5, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 43/97 (44%), Gaps = 11/97 (11%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 EI DC SG GGQ VNT +AV + HIPTG+VV+ + R KN A+ L Sbjct: 35 PEIRREDCEQKFISGSGPGGQKVNTAQNAVMLKHIPTGIVVKVHESRLLPKNIEIAYERL 94 Query: 281 RAKL-----------YELELQKREEIANIGESSKTEI 306 R K YE +L+K E K E Sbjct: 95 RLKYALDRHVNKEKCYEEQLKKLERAKEEKLKRKREA 131 >gi|298386913|ref|ZP_06996468.1| ABC transporter, ATP-binding protein [Bacteroides sp. 1_1_14] gi|298260587|gb|EFI03456.1| ABC transporter, ATP-binding protein [Bacteroides sp. 1_1_14] Length = 680 Score = 38.6 bits (88), Expect = 1.5, Method: Composition-based stats. Identities = 9/74 (12%), Positives = 31/74 (41%), Gaps = 5/74 (6%) Query: 2 KLSRQLNCL-GGLFDWDNAVQR----LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56 +L++++ L + D + +++ ++ L K P ++ + + ++ LD + Sbjct: 606 ELNKKIKKLERQVADCEASIEETESAIAILEAKMATPEGASDMQLYERHQKLKKQLDTTV 665 Query: 57 SFIKEIQDRLCDNL 70 + + L + Sbjct: 666 EEWERVSMELEEVK 679 >gi|205372354|ref|ZP_03225168.1| ABC transporter ATP-binding protein uup [Bacillus coahuilensis m4-4] Length = 642 Score = 38.6 bits (88), Expect = 1.5, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 18/35 (51%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER 49 D +++ L + DP +++N E + +M+E Sbjct: 93 DVQELERQIRSLEQQMADPTIYENATEYERVMKEY 127 Score = 35.9 bits (81), Expect = 8.8, Method: Composition-based stats. Identities = 8/53 (15%), Positives = 16/53 (30%), Gaps = 7/53 (13%) Query: 16 WDNAVQRLSFLN-------TKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + R+ L DP ++Q+ + L E + + E Sbjct: 584 LEEVEARIEELEVAIATNEEALCDPEVFQDHEAVQKLTDEINAYKQEVDDLME 636 >gi|116873510|ref|YP_850291.1| ABC transporter, ATP-binding protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742388|emb|CAK21512.1| ABC transporter, ATP-binding protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 650 Score = 38.6 bits (88), Expect = 1.5, Method: Composition-based stats. Identities = 9/70 (12%), Positives = 28/70 (40%), Gaps = 3/70 (4%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-KEI 62 R+L + + ++++ L + P ++QN +A + +E + + +E Sbjct: 583 KRKLEEIEKSM--EETDEKIAELELQLTKPEIFQNHEKALEITQELDVIKANGESLMEEW 640 Query: 63 QDRLCDNLIL 72 + + + Sbjct: 641 ETVSEELESM 650 >gi|54296203|ref|YP_122572.1| hypothetical protein lpp0229 [Legionella pneumophila str. Paris] gi|53749988|emb|CAH11376.1| hypothetical protein lpp0229 [Legionella pneumophila str. Paris] Length = 136 Score = 38.6 bits (88), Expect = 1.5, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 42/85 (49%) Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 + + I E+D SG GGQ ++ T S V + H+PTG+ V+CQ+ RS+ N+ Sbjct: 12 EKMTNLHIYETDLSEKFILGSGKGGQKLHKTASTVYLKHLPTGMEVKCQESRSREDNRYF 71 Query: 276 AWNMLRAKLYELELQKREEIANIGE 300 A L KL + ++ + E Sbjct: 72 ARQRLCEKLQAVFSDEKTKTQQRIE 96 >gi|323143446|ref|ZP_08078129.1| ABC transporter, ATP-binding protein [Succinatimonas hippei YIT 12066] gi|322416731|gb|EFY07382.1| ABC transporter, ATP-binding protein [Succinatimonas hippei YIT 12066] Length = 641 Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 10/78 (12%), Positives = 34/78 (43%), Gaps = 9/78 (11%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ--NVIEAKMLMRERQHL-----DNA 55 L +++ + + + R++ + + D ++ + E + L++ER L + Sbjct: 564 LKQKIEKIER--ELEQIKNRMAEIESILADSSIYNVEHKAELENLLKERGTLISNQEELE 621 Query: 56 ISFIKEIQDRLCDNLILL 73 ++++ E+++ L Sbjct: 622 VNYLLELENLENKEKELH 639 >gi|242079757|ref|XP_002444647.1| hypothetical protein SORBIDRAFT_07g025350 [Sorghum bicolor] gi|241940997|gb|EES14142.1| hypothetical protein SORBIDRAFT_07g025350 [Sorghum bicolor] Length = 806 Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 23/206 (11%), Positives = 65/206 (31%), Gaps = 7/206 (3%) Query: 2 KLSRQLNCLGG-LFDWD-NAVQRLSFLNT-KTEDPHLWQNVIEAKMLMRERQHLDNAISF 58 K+ QL+ + + + + LN K + +W N + +E + Sbjct: 118 KIKEQLHEREQYILELEMKLNDKDRELNALKIDHQTVWANQDLIREQTKELATVRRERDN 177 Query: 59 IK----EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114 + + ++ D LL + Q + + + + ++ + +S + Sbjct: 178 SEAERAQHLKQIHDLQELLREKESQFIALDEQHRAAQDNILYKDEQLREAHAWVSQVREM 237 Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174 + + + + + ++AE ++ ++ E A +++ G Sbjct: 238 DALQSQSLQVELRERMEQFNQYWISFQQQYAEMQRSLLHTIQQLQQELAETRASGAQKDG 297 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNS 200 P E + + S + S Sbjct: 298 PQVSREGSAESSHVQSIANSVASNGS 323 >gi|114571176|ref|YP_757856.1| ABC transporter-like protein [Maricaulis maris MCS10] gi|114341638|gb|ABI66918.1| ABC transporter related protein [Maricaulis maris MCS10] Length = 602 Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 7/60 (11%), Positives = 19/60 (31%), Gaps = 4/60 (6%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER----QHLDNAISFIKEIQDRLCDNL 70 + + Q ++ L DP L+ + + + Q + E++ + Sbjct: 542 EIEKLSQEIARLEADMADPKLFADSARFTAVSKRLGEAMQDRADKEDRWLELEALREEIE 601 >gi|157115053|ref|XP_001652537.1| hypothetical protein AaeL_AAEL007062 [Aedes aegypti] gi|108877071|gb|EAT41296.1| hypothetical protein AaeL_AAEL007062 [Aedes aegypti] Length = 729 Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 41/141 (29%), Gaps = 14/141 (9%) Query: 6 QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 + L D D+ LN + EDPH+ + L Q + + + + Sbjct: 354 TVELLRFYLDVDS-------LNKELEDPHITTDP---TKLSSLHQQSEKLLQTYQSMMKN 403 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125 ++ I L + + K + ++ L+ G D + + Sbjct: 404 EKESSIATTLNEAHERVK----EKLEDKWRKQFSKTFEYFELIYGNRDIKENSDKKSPEG 459 Query: 126 GGTESQDWANMLLRMYTRWAE 146 GG ++ + Sbjct: 460 GGGSGTKLSSKFKEAIRGAVD 480 >gi|50287521|ref|XP_446190.1| hypothetical protein [Candida glabrata CBS 138] gi|49525497|emb|CAG59114.1| unnamed protein product [Candida glabrata] Length = 187 Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 37/62 (59%) Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292 + +G GGQ +N +S V+I H+P+ +VV CQ RS+ +N+ A L +L +L + Sbjct: 57 HGGTGPGGQKINKCNSKVQIKHVPSNIVVTCQATRSRDQNRKIAREKLALELERWQLGQE 116 Query: 293 EE 294 ++ Sbjct: 117 KD 118 >gi|298505048|gb|ADI83771.1| ABC transporter, ATP-binding protein [Geobacter sulfurreducens KN400] Length = 645 Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 22/61 (36%), Gaps = 3/61 (4%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKEIQ 63 ++L L L+ L + DP + + +A+ E L I+ +E + Sbjct: 583 KRLEELESA--IAAEEGHLAALEGRMADPAFFDDHEQARRGGEEHAMLTARIATLYEEWE 640 Query: 64 D 64 Sbjct: 641 S 641 >gi|237843561|ref|XP_002371078.1| plectin, putative [Toxoplasma gondii ME49] gi|211968742|gb|EEB03938.1| plectin, putative [Toxoplasma gondii ME49] Length = 3686 Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 76/305 (24%), Gaps = 20/305 (6%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRER-QHLDNAISFIKEIQDRLCDNL------I 71 + L+ + + A L RE + +Q L + Sbjct: 3173 KNEELAQVTAELAAQE-----EHAAALRRELEAQAQQFAASEATLQAALSEAEKKSLACE 3227 Query: 72 LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131 ++ + + V ++ + + + EA+ E + Sbjct: 3228 ARMREELQNHVAAASRIKAEEESRMQFVLEQEKKKVAAEEAEKLRKTFERLWDEESAKML 3287 Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191 + R K E LE EA + A L + E+ R Sbjct: 3288 QAYEAVARQLAEAQRAMHAKGEELEEVKKREAEARRAALDATQEASEVQELREKLAARDA 3347 Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC--RIDTYRASGAGGQHV-NTTDS 248 +S S ++ T + + E + DT + Sbjct: 3348 ELSELRSANKEQTEELATVRANQTRLAEEAARQREALEKQRDTLEKEREVLRGQVEDAKD 3407 Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308 R T C + + LR ++ E EL+ + E Sbjct: 3408 RERERARQTEEQESCLRRALAEREDEARQKTLRLQVLEEELETEKHRNASAEKR-----R 3462 Query: 309 GRQIR 313 G +IR Sbjct: 3463 GEEIR 3467 >gi|297587287|ref|ZP_06945932.1| ABC superfamily ATP binding cassette transporter, ABC protein [Finegoldia magna ATCC 53516] gi|297575268|gb|EFH93987.1| ABC superfamily ATP binding cassette transporter, ABC protein [Finegoldia magna ATCC 53516] Length = 637 Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 10/71 (14%), Positives = 29/71 (40%), Gaps = 3/71 (4%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD-NAISFIK 60 KL +Q+ + + D +R+ + ++ + + L E ++L+ + S Sbjct: 565 KLRKQIETIES--NIDKIDERIKEIEDMFCQNDIYDDPKKILQLNEELENLNADKNSLYS 622 Query: 61 EIQDRLCDNLI 71 + +D+ + Sbjct: 623 DWEDKQLEYED 633 >gi|172058791|ref|YP_001815251.1| ABC transporter related [Exiguobacterium sibiricum 255-15] gi|171991312|gb|ACB62234.1| ABC transporter related [Exiguobacterium sibiricum 255-15] Length = 633 Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 10/62 (16%), Positives = 27/62 (43%), Gaps = 3/62 (4%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD-NAISFIKEI 62 +QL L + + R + +P ++ ++ +A L ER +D + + +++ Sbjct: 572 KQQLEQLEQ--EIERLENRSVEIEQLLCEPEVFNDIPKATALSAERDQIDVDLLELMEQW 629 Query: 63 QD 64 + Sbjct: 630 ES 631 >gi|52840422|ref|YP_094221.1| peptide chain release factor [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627533|gb|AAU26274.1| peptide chain release factor [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 136 Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 42/85 (49%) Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 + + I E+D SG GGQ ++ T S V + H+PTG+ V+CQ+ RS+ N+ Sbjct: 12 EKMTNLHIYETDLSEKFILGSGKGGQKLHKTASTVYLKHLPTGMEVKCQESRSREDNRYF 71 Query: 276 AWNMLRAKLYELELQKREEIANIGE 300 A L KL + ++ + E Sbjct: 72 ARQRLCEKLQAVFSDEKTKTQQRIE 96 >gi|55958422|emb|CAI16617.1| mitochondrial translational release factor 1 [Homo sapiens] Length = 226 Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 48/146 (32%), Gaps = 11/146 (7%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76 +N + L + + N + L R L + +EIQ+ L + Sbjct: 80 ENLSKEYQTLEQCLQHIPV--NEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMC 137 Query: 77 LEEDDCSILQETSDNLQRIKLEVEYKQFES-------LLSGEADSNDAYLEVHAG--AGG 127 + Q L+ + + + + D ND LEV AG GG Sbjct: 138 KSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 197 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTE 153 Q + + MY ++ + ++ E Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFE 223 >gi|330941932|ref|XP_003306099.1| hypothetical protein PTT_19132 [Pyrenophora teres f. teres 0-1] gi|311316572|gb|EFQ85807.1| hypothetical protein PTT_19132 [Pyrenophora teres f. teres 0-1] Length = 205 Score = 38.6 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 46/83 (55%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 + + +SD + + SG GGQ +N T SAV++ HIPTG+VV+ Q RS+ N+ A Sbjct: 20 PPRVPLPDSDLIENFLKGSGPGGQKINKTSSAVQLKHIPTGIVVKYQDTRSREINRKMAR 79 Query: 278 NMLRAKLYELELQKREEIANIGE 300 +L+ ++ EL+L + Sbjct: 80 RILQDRIEELQLGEDARTRVRAR 102 >gi|16801244|ref|NP_471512.1| hypothetical protein lin2179 [Listeria innocua Clip11262] gi|16414692|emb|CAC97408.1| lin2179 [Listeria innocua Clip11262] Length = 650 Score = 38.2 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 8/68 (11%), Positives = 29/68 (42%), Gaps = 6/68 (8%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFI 59 R+L + + ++++ L + P ++Q+ +A + +E + + + Sbjct: 583 KRKLEEVEKSM--EETDKKIAELELQLTKPEIFQDHEKAFEITQELDVVKARGEKLMEEW 640 Query: 60 KEIQDRLC 67 +++ + L Sbjct: 641 EKVSEELE 648 >gi|282858138|ref|ZP_06267333.1| ABC transporter, ATP-binding protein [Pyramidobacter piscolens W5455] gi|282584060|gb|EFB89433.1| ABC transporter, ATP-binding protein [Pyramidobacter piscolens W5455] Length = 644 Score = 38.2 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 8/67 (11%), Positives = 22/67 (32%), Gaps = 11/67 (16%) Query: 15 DWDNAVQRLSFLN-------TKTEDPHLWQNVIEAKMLMRER----QHLDNAISFIKEIQ 63 + +R+ L + P + + + LM++ L+ A +E+ Sbjct: 575 ELAALEERIDDLERRKGRDEKELCRPEVIADSNRIQTLMKDLADAGAELEAATGRWEELM 634 Query: 64 DRLCDNL 70 + + Sbjct: 635 EIIEKIE 641 >gi|115378407|ref|ZP_01465569.1| peptidyl-tRNA hydrolase domain protein [Stigmatella aurantiaca DW4/3-1] gi|310819398|ref|YP_003951756.1| peptidyl-tRNA hydrolase domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115364597|gb|EAU63670.1| peptidyl-tRNA hydrolase domain protein [Stigmatella aurantiaca DW4/3-1] gi|309392470|gb|ADO69929.1| Peptidyl-tRNA hydrolase domain protein [Stigmatella aurantiaca DW4/3-1] Length = 125 Score = 38.2 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 32/99 (32%), Positives = 41/99 (41%), Gaps = 21/99 (21%) Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL- 284 C ++ + ASG GGQH NTT S VR+TH T + V + RSQ +NK A LR L Sbjct: 24 KTCEVEYFIASGPGGQHRNTTASGVRLTHPSTELSVTATERRSQIQNKGVALERLREGLK 83 Query: 285 --------------------YELELQKREEIANIGESSK 303 LE +K+E K Sbjct: 84 VLTFVPKVRRATKPTKGSQRRRLEGKKQESQKKALRGKK 122 >gi|312880801|ref|ZP_07740601.1| ABC transporter related protein [Aminomonas paucivorans DSM 12260] gi|310784092|gb|EFQ24490.1| ABC transporter related protein [Aminomonas paucivorans DSM 12260] Length = 659 Score = 38.2 bits (87), Expect = 1.7, Method: Composition-based stats. Identities = 8/54 (14%), Positives = 21/54 (38%), Gaps = 1/54 (1%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKEIQDRLCDNLIL 72 R + + DP + + + LM+E + L ++ +E + + + Sbjct: 605 EARKTQVEALLCDPAVLGDSSRVQDLMKELRLLQESLKTRYEEWEALSLEMEAI 658 >gi|302911185|ref|XP_003050437.1| hypothetical protein NECHADRAFT_84770 [Nectria haematococca mpVI 77-13-4] gi|256731374|gb|EEU44724.1| hypothetical protein NECHADRAFT_84770 [Nectria haematococca mpVI 77-13-4] Length = 186 Score = 38.2 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 38/60 (63%) Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 + + SG GGQ +N T+SAV++ HIPTG+VV+ Q RS+ +N+ A +L ++ E Sbjct: 47 EIEESYVKGSGPGGQKINKTNSAVQLKHIPTGIVVKSQATRSRDQNRKHARELLAQRVDE 106 >gi|253680857|ref|ZP_04861660.1| ABC transporter, ATP-binding protein [Clostridium botulinum D str. 1873] gi|253562706|gb|EES92152.1| ABC transporter, ATP-binding protein [Clostridium botulinum D str. 1873] Length = 637 Score = 38.2 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 7/53 (13%), Positives = 22/53 (41%), Gaps = 1/53 (1%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS-FIKEIQDRL 66 D + + + L K ++ + +++ + +E +N + E ++ L Sbjct: 585 DIASLEKDIEELQQKLCLEEIYSDPNKSEEVNKELLTKENKLELLYTEWEELL 637 >gi|148358384|ref|YP_001249591.1| peptide chain release factor [Legionella pneumophila str. Corby] gi|296105734|ref|YP_003617434.1| peptide chain release factor [Legionella pneumophila 2300/99 Alcoy] gi|148280157|gb|ABQ54245.1| peptide chain release factor [Legionella pneumophila str. Corby] gi|295647635|gb|ADG23482.1| peptide chain release factor [Legionella pneumophila 2300/99 Alcoy] Length = 136 Score = 38.2 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 42/85 (49%) Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 + + I E+D SG GGQ ++ T S V + H+PTG+ V+CQ+ RS+ N+ Sbjct: 12 EKMTNLHIYETDLSEKFILGSGKGGQKLHKTASTVYLKHLPTGMEVKCQESRSREDNRYF 71 Query: 276 AWNMLRAKLYELELQKREEIANIGE 300 A L KL + ++ + E Sbjct: 72 ARQRLCEKLQAVFSDEKTKTQQRIE 96 >gi|265991894|ref|ZP_06104451.1| peptide chain release factor [Brucella melitensis bv. 1 str. Rev.1] gi|263002907|gb|EEZ15253.1| peptide chain release factor [Brucella melitensis bv. 1 str. Rev.1] Length = 133 Score = 38.2 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 11/76 (14%), Positives = 29/76 (38%), Gaps = 5/76 (6%) Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 D ++R S + ++ + P + L E L + + I+E+ D + L + Sbjct: 28 DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 83 Query: 76 ALEEDDCSILQETSDN 91 + + ++ + Sbjct: 84 RDDASTDAEMRALAVE 99 >gi|288958910|ref|YP_003449251.1| ABC transporter ATP-binding protein [Azospirillum sp. B510] gi|288911218|dbj|BAI72707.1| ABC transporter ATP-binding protein [Azospirillum sp. B510] Length = 609 Score = 38.2 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 10/72 (13%), Positives = 22/72 (30%), Gaps = 7/72 (9%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPH-LWQNVIEAKMLMRER----QHLDNAISF 58 R+L+ L D ++ L DP ++ + + + L A Sbjct: 536 QRELDELPARMD--TLSAEIAKLEKLLADPDLFTRDAAKFQKTSEQLHARQAALATAEER 593 Query: 59 IKEIQDRLCDNL 70 E++ + Sbjct: 594 WLELEAMREELE 605 >gi|85101373|ref|XP_961134.1| hypothetical protein NCU04174 [Neurospora crassa OR74A] gi|16944642|emb|CAD11402.1| conserved hypothetical protein [Neurospora crassa] gi|28922674|gb|EAA31898.1| predicted protein [Neurospora crassa OR74A] Length = 172 Score = 38.2 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 42/68 (61%) Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 ++ E + + SG GGQ +N T+SAV++ HIPT +V++CQ+ RS+ +N+ A Sbjct: 1 MPPRPKLPEDELEEVYLKGSGPGGQKINKTNSAVQLRHIPTNIVIKCQETRSRTQNRKLA 60 Query: 277 WNMLRAKL 284 +L AK+ Sbjct: 61 REILAAKV 68 >gi|241951644|ref|XP_002418544.1| conserved hypothetical protein [Candida dubliniensis CD36] gi|223641883|emb|CAX43846.1| conserved hypothetical protein [Candida dubliniensis CD36] Length = 171 Score = 38.2 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 26/56 (46%), Positives = 36/56 (64%) Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 + G GGQ +N ++S V++THIPTG+VV CQ RSQ +N+A A L KL + Sbjct: 46 HGGRGPGGQKINKSNSKVQLTHIPTGMVVSCQATRSQEQNRAIAREKLALKLDDYY 101 >gi|322421144|ref|YP_004200367.1| ABC transporter-like protein [Geobacter sp. M18] gi|320127531|gb|ADW15091.1| ABC transporter related protein [Geobacter sp. M18] Length = 648 Score = 38.2 bits (87), Expect = 1.8, Method: Composition-based stats. Identities = 8/62 (12%), Positives = 17/62 (27%), Gaps = 3/62 (4%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD-NAISFIKEI 62 R+L + L+ L K P + + A+ L + + Sbjct: 588 ERKLTEIED--KIGTKEGELAKLEEKMAAPEFFADHEAARAAGERHAQLTAEIAALYEAW 645 Query: 63 QD 64 + Sbjct: 646 ES 647 >gi|327393366|dbj|BAK10788.1| ABC transporter ATP-binding protein Uup [Pantoea ananatis AJ13355] Length = 639 Score = 38.2 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 10/70 (14%), Positives = 25/70 (35%), Gaps = 7/70 (10%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNV-IEAKMLMRERQHLDNAISF--- 58 L+R+L L + R+ L K P + + + ++ E ++ + Sbjct: 570 LTRELEQLPQ--KLEQLEARIGELQAKMSHPDFFSQPHDKTQPVLDELADVEQQLETAFA 627 Query: 59 -IKEIQDRLC 67 +E++ Sbjct: 628 RWEELESLRN 637 >gi|73662141|ref|YP_300922.1| ABC transporter ATPase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72494656|dbj|BAE17977.1| ATPase component of ABC transporter with duplicated ATPase domains [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 642 Score = 38.2 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 31/69 (44%), Gaps = 6/69 (8%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAK--MLMRERQH--LDNAIS 57 ++ RQ+ D + +++ +N + P ++ +A + ++ L+ +S Sbjct: 575 QIERQIETCEA--DIEQFEAQINEINEQLTLPDVYSTPEKANDLAISKQHTEQKLEQVMS 632 Query: 58 FIKEIQDRL 66 E+Q++L Sbjct: 633 EWAELQEKL 641 >gi|332283975|ref|YP_004415886.1| ABC transporter ATP-binding protein [Pusillimonas sp. T7-7] gi|330427928|gb|AEC19262.1| ABC transporter ATP-binding protein [Pusillimonas sp. T7-7] Length = 644 Score = 38.2 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 24/81 (29%), Gaps = 12/81 (14%) Query: 4 SRQLNCLGGLFDWDNAV---------QRLSFLNTKTEDPHLWQNVIEAK--MLMRERQHL 52 ++L L D QRL LN DP + + + ++ E L Sbjct: 561 RQRLALLRKPLDAKLKKVDADMERAGQRLQVLNALIADPEFYSDARRDERLKVLEEHGEL 620 Query: 53 DNAISFI-KEIQDRLCDNLIL 72 + +E + L Sbjct: 621 SKKHGQLEEEWLMLQEELEAL 641 >gi|226943534|ref|YP_002798607.1| ABC transporter ATP binding protein [Azotobacter vinelandii DJ] gi|226718461|gb|ACO77632.1| ABC transporter, ATP binding component [Azotobacter vinelandii DJ] Length = 639 Score = 38.2 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 4/71 (5%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL R+L + G D L+ L + DP +Q A L++ + Sbjct: 573 KLQRELEAIPG--QIDALEAELAELQERIADPAFYQQP--AAQTAPLLARLESLQQELDR 628 Query: 62 IQDRLCDNLIL 72 + +R + Sbjct: 629 LLERWAELEEA 639 >gi|254555765|ref|YP_003062182.1| ABC transporter, ATP-binding protein [Lactobacillus plantarum JDM1] gi|254044692|gb|ACT61485.1| ABC transporter, ATP-binding protein [Lactobacillus plantarum JDM1] Length = 660 Score = 38.2 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 5/47 (10%), Positives = 17/47 (36%), Gaps = 1/47 (2%) Query: 8 NCLGGLF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53 + +F + +R+ L + DP + + + ++ + Sbjct: 85 EEMSSVFAELHAIEKRMHQLENQLSDPSIMNDEQAYQQTLKTYDQIQ 131 >gi|53715387|ref|YP_101379.1| ABC transporter ATP-binding protein [Bacteroides fragilis YCH46] gi|60683356|ref|YP_213500.1| putative ABC transporter ATP-binding protein [Bacteroides fragilis NCTC 9343] gi|253567409|ref|ZP_04844857.1| ABC transporter ATP-binding protein [Bacteroides sp. 3_2_5] gi|265768285|ref|ZP_06095544.1| ABC transporter ATP-binding protein [Bacteroides sp. 2_1_16] gi|52218252|dbj|BAD50845.1| ABC transporter ATP-binding protein [Bacteroides fragilis YCH46] gi|60494790|emb|CAH09596.1| putative ATP-binding component of ABC transporter [Bacteroides fragilis NCTC 9343] gi|251943791|gb|EES84330.1| ABC transporter ATP-binding protein [Bacteroides sp. 3_2_5] gi|263252220|gb|EEZ23768.1| ABC transporter ATP-binding protein [Bacteroides sp. 2_1_16] gi|301164843|emb|CBW24403.1| putative ATP-binding component of ABC transporter [Bacteroides fragilis 638R] Length = 651 Score = 38.2 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Query: 2 KLSRQLNCLGGLF-DWDNAVQR----LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56 +L++++ L L D + A+++ ++ L K P ++ + + +Q LD+ + Sbjct: 576 ELNKKIKKLERLVADCEAAIEQTESAIAILEEKMATPDGASDMSLYEQHQKLKQQLDHTV 635 Query: 57 SFIKEIQDRLCDNLI 71 + + L + Sbjct: 636 EEWERVSMELEEMNE 650 >gi|85091004|ref|XP_958690.1| hypothetical protein NCU08921 [Neurospora crassa OR74A] gi|28920070|gb|EAA29454.1| predicted protein [Neurospora crassa OR74A] gi|28950290|emb|CAD70744.1| hypothetical protein [Neurospora crassa] Length = 1157 Score = 38.2 bits (87), Expect = 1.9, Method: Composition-based stats. Identities = 8/56 (14%), Positives = 17/56 (30%), Gaps = 13/56 (23%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58 L L + F+ R+ L + + + + RQ + I+ Sbjct: 606 LKSNLKSIRAAFELQEIENRIEELEKQ-------------QKVNQRRQEAERDIAE 648 >gi|145250303|ref|XP_001396665.1| peptidyl-tRNA hydrolase domain protein [Aspergillus niger CBS 513.88] gi|134082184|emb|CAL00939.1| unnamed protein product [Aspergillus niger] Length = 198 Score = 38.2 bits (87), Expect = 2.0, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 44/70 (62%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 ++I ++D + + +G GGQ +N T+SAV+I H PTGVVV+ Q RS+ +N+ A Sbjct: 40 PPRLKIQDADVTVSYLKGTGPGGQKINKTNSAVQIIHKPTGVVVKSQATRSRSQNEKIAR 99 Query: 278 NMLRAKLYEL 287 +L K+ EL Sbjct: 100 QLLADKVEEL 109 >gi|322697002|gb|EFY88787.1| peptidyl-tRNA hydrolase domain protein [Metarhizium acridum CQMa 102] Length = 187 Score = 38.2 bits (87), Expect = 2.1, Method: Composition-based stats. Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 2/82 (2%) Query: 213 PVVDDSIEIEISESDCRID--TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 P + DC I+ + SG GGQ +N T+SAV++ H+PTG+VV+ Q RS+ Sbjct: 28 PQSKNLPPRPKPPPDCEIEESFLKGSGPGGQKINKTNSAVQLKHVPTGIVVKSQATRSRS 87 Query: 271 KNKAQAWNMLRAKLYELELQKR 292 +N+ A +L K+ +L ++ Sbjct: 88 QNRKHARELLAQKVDDLLHGEQ 109 >gi|83859973|ref|ZP_00953493.1| hypothetical protein OA2633_08229 [Oceanicaulis alexandrii HTCC2633] gi|83852332|gb|EAP90186.1| hypothetical protein OA2633_08229 [Oceanicaulis alexandrii HTCC2633] Length = 603 Score = 38.2 bits (87), Expect = 2.1, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 21/72 (29%), Gaps = 7/72 (9%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPH-LWQNVIEAKMLMRERQHLDN----AISF 58 L L G + + L+ L T+ D +N +E L + Sbjct: 532 KHALETLPG--EIEKIEATLAKLETELADSTLFTKNPERFNAATKEHARLTDDKAAKEER 589 Query: 59 IKEIQDRLCDNL 70 E++ + Sbjct: 590 WLELEMLREEIE 601 >gi|291616938|ref|YP_003519680.1| Uup [Pantoea ananatis LMG 20103] gi|291151968|gb|ADD76552.1| Uup [Pantoea ananatis LMG 20103] Length = 639 Score = 38.2 bits (87), Expect = 2.1, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 25/67 (37%), Gaps = 7/67 (10%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNV-IEAKMLMRERQHLDNAISF--- 58 L+R+L L + R+ L K P + + + ++ E ++ + Sbjct: 570 LTRELEQLPQ--KLEQLEARIGELQAKMSHPDFFSQPHDKTQPVLDELADVEQQLETAFA 627 Query: 59 -IKEIQD 64 +E++ Sbjct: 628 RWEELES 634 >gi|115379294|ref|ZP_01466406.1| ABC transporter, ATP-binding protein [Stigmatella aurantiaca DW4/3-1] gi|310821039|ref|YP_003953397.1| ABC transporter ATP-binding protein [Stigmatella aurantiaca DW4/3-1] gi|115363704|gb|EAU62827.1| ABC transporter, ATP-binding protein [Stigmatella aurantiaca DW4/3-1] gi|309394111|gb|ADO71570.1| ABC transporter, ATP-binding protein [Stigmatella aurantiaca DW4/3-1] Length = 656 Score = 38.2 bits (87), Expect = 2.1, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 15/68 (22%) Query: 15 DWDNAVQRLSFLN-------TKTEDPHLWQNVIEAKMLM------RERQHLDNAISFIKE 61 + +R+S L + DP L+ + AK LM +E L++ + + Sbjct: 586 EIARIEERISKLETAQKEREAQLADPDLYNDFARAKPLMDTHRAGKE--ELESLYAAWEA 643 Query: 62 IQDRLCDN 69 Q++L + Sbjct: 644 AQEKLAEA 651 >gi|227514364|ref|ZP_03944413.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus fermentum ATCC 14931] gi|227087230|gb|EEI22542.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus fermentum ATCC 14931] Length = 662 Score = 38.2 bits (87), Expect = 2.1, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 28/71 (39%), Gaps = 6/71 (8%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER----QHLDNAIS 57 KL R + L + ++ + T+ DP + ++ + L +E + L++ Sbjct: 591 KLQRTVADLEEQM--NQLGEQQEQVETQMADPDVATDIGKLTDLQKELDALTKQLEDVEE 648 Query: 58 FIKEIQDRLCD 68 +RL + Sbjct: 649 QWTAAAERLEE 659 >gi|189911793|ref|YP_001963348.1| peptidyl-tRNA hydrolase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776469|gb|ABZ94770.1| Peptidyl-tRNA hydrolase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] Length = 131 Score = 38.2 bits (87), Expect = 2.1, Method: Composition-based stats. Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 3/79 (3%) Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 + I ESD + +ASG GGQ+VN +AV + H+PTG V+C RSQ N+ + Sbjct: 20 KRMEALGIRESDLKEQFVKASGKGGQNVNKVATAVVLLHLPTGKQVKCSIYRSQGLNRYK 79 Query: 276 AWNMLRAKLYELELQKREE 294 A ++L ELE ++R E Sbjct: 80 ARDLLC---LELEKEQRPE 95 >gi|24372474|ref|NP_716516.1| ABC transporter, ATP-binding protein [Shewanella oneidensis MR-1] gi|24346463|gb|AAN53961.1|AE015533_12 ABC transporter, ATP-binding protein [Shewanella oneidensis MR-1] Length = 637 Score = 38.2 bits (87), Expect = 2.1, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 29/80 (36%), Gaps = 8/80 (10%) Query: 2 KLSRQLNCLGGL-----FDWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLMRERQHLDN 54 +L ++++ L D +RL+ L D L+ N + ++ ER L Sbjct: 552 ELRQKVSPLKRKQAKLEIDQQKLSERLAELEHLLADGELYDQDNKAKLTSVLSERTSLTQ 611 Query: 55 AISFIK-EIQDRLCDNLILL 73 + + + + + + Sbjct: 612 TLEESEMQWLELQEEIDTME 631 >gi|196230546|ref|ZP_03129408.1| Class I peptide chain release factor [Chthoniobacter flavus Ellin428] gi|196225476|gb|EDY19984.1| Class I peptide chain release factor [Chthoniobacter flavus Ellin428] Length = 132 Score = 37.9 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 27/79 (34%), Positives = 38/79 (48%) Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 D R+SG GGQHVN +AV + H+P+G V Q RSQ N+ AW L + E Sbjct: 24 DFEEKFSRSSGPGGQHVNKVSTAVMLRHVPSGAAVTVQDTRSQSMNRQLAWTRLLDAIEE 83 Query: 287 LELQKREEIANIGESSKTE 305 +R + E + + Sbjct: 84 QRRAERAARRSEIEKKRRQ 102 >gi|54293184|ref|YP_125599.1| hypothetical protein lpl0230 [Legionella pneumophila str. Lens] gi|53753016|emb|CAH14459.1| hypothetical protein lpl0230 [Legionella pneumophila str. Lens] Length = 136 Score = 37.9 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 43/85 (50%) Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 + + I E+D +SG GGQ ++ T S V + H+PTG+ V+CQ+ RS+ N+ Sbjct: 12 EKMTNLHIYETDLSEKFILSSGKGGQKLHKTASTVYLKHLPTGMEVKCQESRSREDNRYF 71 Query: 276 AWNMLRAKLYELELQKREEIANIGE 300 A L KL + ++ + E Sbjct: 72 ARQRLCEKLQAVFSDEKTKTQQRIE 96 >gi|193215052|ref|YP_001996251.1| ABC transporter-like protein [Chloroherpeton thalassium ATCC 35110] gi|193088529|gb|ACF13804.1| ABC transporter-related protein [Chloroherpeton thalassium ATCC 35110] Length = 647 Score = 37.9 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 5/58 (8%), Positives = 18/58 (31%), Gaps = 11/58 (18%) Query: 15 DWDNAVQRLSFLNT-------KTEDPHLWQNVIEAKMLMRER----QHLDNAISFIKE 61 + +++ L T + +P + + +++ + E L+ Sbjct: 587 EISKLERKIEELETKKSDYETQMAEPDFYADEKKSQKTLGEYERVTAELEKLYESWDA 644 >gi|257458160|ref|ZP_05623314.1| ABC transporter, ATP-binding protein [Treponema vincentii ATCC 35580] gi|257444454|gb|EEV19543.1| ABC transporter, ATP-binding protein [Treponema vincentii ATCC 35580] Length = 662 Score = 37.9 bits (86), Expect = 2.2, Method: Composition-based stats. Identities = 7/53 (13%), Positives = 22/53 (41%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67 + ++ L T+ P ++ + + + + ++ Q L + + E + L Sbjct: 610 ELAQTEDKIKELETQLASPEVYADGEKVRSVQQQIQALQENAAALTEQWEALN 662 >gi|312959622|ref|ZP_07774139.1| ABC transporter-like protein [Pseudomonas fluorescens WH6] gi|311286339|gb|EFQ64903.1| ABC transporter-like protein [Pseudomonas fluorescens WH6] Length = 639 Score = 37.9 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 4/70 (5%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL R+L L G D D Q+++ + + D +Q A + L+ ++ Sbjct: 574 KLQRELEALPG--DIDAKEQQIAAVEAEMADAGFYQRP--AAETAKVIASLEALNQELEV 629 Query: 62 IQDRLCDNLI 71 + +R + Sbjct: 630 LVERWAELDA 639 >gi|167039632|ref|YP_001662617.1| putative carbohydrate-binding protein [Thermoanaerobacter sp. X514] gi|300915119|ref|ZP_07132434.1| glycosyltransferase 36 [Thermoanaerobacter sp. X561] gi|307725042|ref|YP_003904793.1| glycosyltransferase 36 [Thermoanaerobacter sp. X513] gi|166853872|gb|ABY92281.1| putative carbohydrate binding [Thermoanaerobacter sp. X514] gi|300888843|gb|EFK83990.1| glycosyltransferase 36 [Thermoanaerobacter sp. X561] gi|307582103|gb|ADN55502.1| glycosyltransferase 36 [Thermoanaerobacter sp. X513] Length = 2887 Score = 37.9 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 14/150 (9%), Positives = 49/150 (32%), Gaps = 8/150 (5%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRL--SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58 ++L++ L + + + + + + LN KT P W+ + + + ++ + Sbjct: 1153 IELAKGLKDTIKMLNIEGITEDIFRNILNKKTLMPSDWE--VFLSKISEKLSSTEDEVGN 1210 Query: 59 IKEIQDRL----CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114 I+ +++ + + L ++ + + + K+ E + Sbjct: 1211 IERLKNIIGALKREMKEFLAWTEFDERQKEQEIFKRYKEVFEEHSSPKELEKVYKNYLLE 1270 Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRW 144 + E + + + R + Sbjct: 1271 IEEVFEKATEEEKALLKSQKDKVARALEKI 1300 >gi|150388645|ref|YP_001318694.1| ABC transporter related [Alkaliphilus metalliredigens QYMF] gi|149948507|gb|ABR47035.1| ABC transporter related [Alkaliphilus metalliredigens QYMF] Length = 640 Score = 37.9 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 7/51 (13%), Positives = 21/51 (41%), Gaps = 4/51 (7%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFIKE 61 D +RL+ L + ++ + +++ + +E +Q L+ + Sbjct: 586 DILELEERLNALESLMCQEDIYTDPQKSREVHQETLTTKQSLEKLYEEWEN 636 >gi|187736226|ref|YP_001878338.1| peptide chain release factor [Akkermansia muciniphila ATCC BAA-835] gi|187426278|gb|ACD05557.1| peptide chain release factor [Akkermansia muciniphila ATCC BAA-835] Length = 120 Score = 37.9 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 43/91 (47%) Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 + + I E D R SG GGQ VN T++ V + H PTG+ V+C +RS+ N+ Sbjct: 11 RERMEALGIREQDLEESFVRGSGRGGQKVNKTNNCVYLRHTPTGIAVKCHADRSRELNRF 70 Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTE 305 A L + +++ + + + + + Sbjct: 71 LARRELCDAVEQMQTGRCAARTRVIQRMRKQ 101 >gi|149278773|ref|ZP_01884908.1| fused predicted transporter subunit of ABC superfamily: ATP-binding component [Pedobacter sp. BAL39] gi|149230392|gb|EDM35776.1| fused predicted transporter subunit of ABC superfamily: ATP-binding component [Pedobacter sp. BAL39] Length = 559 Score = 37.9 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 7/53 (13%), Positives = 22/53 (41%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 G+ + ++ +N + P ++++ + LM + L + I + + Sbjct: 94 EGVAEITAILKEYESINEQFGLPEVYEDADAMEKLMNRQGELQDKIDAVNAWE 146 >gi|120553410|ref|YP_957761.1| ABC transporter related [Marinobacter aquaeolei VT8] gi|120323259|gb|ABM17574.1| ABC transporter related protein [Marinobacter aquaeolei VT8] Length = 648 Score = 37.9 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 9/57 (15%), Positives = 21/57 (36%), Gaps = 8/57 (14%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73 + Q+L+ + DP L+ + + + L ++ E++ L D Sbjct: 584 EQLQQKLATVEHNLADPGLYDDQQKLR--------LKELLAEQTELKRELDDVEAEW 632 >gi|330808496|ref|YP_004352958.1| ABC transporter ATP-binding protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376604|gb|AEA67954.1| Putative ABC transporter, ATP-binding component [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 639 Score = 37.9 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 4/70 (5%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL R+L L G D D Q+++ + + D +Q A + HL+ + Sbjct: 574 KLQRELEALPG--DIDAKEQQIAAVEAEMADAGFYQRP--AAETAKVIAHLEQLQVELDA 629 Query: 62 IQDRLCDNLI 71 + +R + Sbjct: 630 LVERWAELDA 639 >gi|316976972|gb|EFV60157.1| nicotinamide phosphoribosyltransferase [Trichinella spiralis] Length = 544 Score = 37.9 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 34/67 (50%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 + E D G GGQ+VN + V + H+PTG+ V+ ++R +N+ A L Sbjct: 412 PPLEEPDLEEKFVSGHGPGGQNVNKRQNCVFLRHVPTGLSVKVHEDRLLQRNRIIARVRL 471 Query: 281 RAKLYEL 287 + KL +L Sbjct: 472 QEKLDQL 478 >gi|148284146|ref|YP_001248236.1| ABC transporter, ATP-binding protein [Orientia tsutsugamushi str. Boryong] gi|146739585|emb|CAM79335.1| ABC transporter, ATP-binding protein [Orientia tsutsugamushi str. Boryong] Length = 601 Score = 37.9 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 32/75 (42%), Gaps = 11/75 (14%) Query: 2 KLSRQLN-CLGGLFD-----WDNAVQRLSFLNTKTEDPHLW-QNVIEAKMLMRERQ---- 50 KLS +L+ + D ++ L K DP+L+ N + + +E + Sbjct: 525 KLSTKLSYKFQRMLDSIPKEITQLETQVEDLEKKLADPNLYQNNQDKFLLFSKELETSKL 584 Query: 51 HLDNAISFIKEIQDR 65 ++ + ++I++R Sbjct: 585 RIEELFNTWQKIENR 599 >gi|299782881|gb|ADJ40879.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus fermentum CECT 5716] Length = 647 Score = 37.9 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 28/71 (39%), Gaps = 6/71 (8%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER----QHLDNAIS 57 KL R + L + ++ + T+ DP + ++ + L +E + L++ Sbjct: 576 KLQRTVADLEEQM--NQLGEQQEQVETQMADPDVATDIGKLTDLQKELDALTKQLEDVEE 633 Query: 58 FIKEIQDRLCD 68 +RL + Sbjct: 634 QWTAAAERLEE 644 >gi|149633371|ref|XP_001507092.1| PREDICTED: similar to My030 protein [Ornithorhynchus anatinus] Length = 217 Score = 37.9 bits (86), Expect = 2.3, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 43/84 (51%) Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260 R + + D + ++ES+ + G GGQ N T + V + HIP+G+V Sbjct: 77 RPGRVQRPLQLAGKKDSQHLLVLNESELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIV 136 Query: 261 VQCQQERSQHKNKAQAWNMLRAKL 284 V+C Q RS +N+ +A +L+ K+ Sbjct: 137 VKCHQTRSVDQNRKKAREILQEKV 160 >gi|308179741|ref|YP_003923869.1| ABC transporter, ATP-binding protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|308045232|gb|ADN97775.1| ABC transporter, ATP-binding protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 660 Score = 37.9 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 5/47 (10%), Positives = 17/47 (36%), Gaps = 1/47 (2%) Query: 8 NCLGGLF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53 + +F + +R+ L + DP + + + ++ + Sbjct: 85 EEMSSVFAELHAIEKRMHQLENQLSDPAIMNDEQAYQQTLKTYDQIQ 131 >gi|255692713|ref|ZP_05416388.1| putative ABC transporter, ATP-binding protein [Bacteroides finegoldii DSM 17565] gi|260621548|gb|EEX44419.1| putative ABC transporter, ATP-binding protein [Bacteroides finegoldii DSM 17565] Length = 685 Score = 37.9 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 9/74 (12%), Positives = 31/74 (41%), Gaps = 5/74 (6%) Query: 2 KLSRQLNCL-GGLFDWDNAVQR----LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56 +L++++ L + D + +++ ++ + K P ++ + + +Q LD + Sbjct: 611 ELNKKIKKLERQVADCEASIEETEAAIAIVEEKMATPEGASDMQLYERHQKLKQQLDTIV 670 Query: 57 SFIKEIQDRLCDNL 70 + + L + Sbjct: 671 EEWERVSMELEEVK 684 >gi|255539765|ref|XP_002510947.1| conserved hypothetical protein [Ricinus communis] gi|223550062|gb|EEF51549.1| conserved hypothetical protein [Ricinus communis] Length = 205 Score = 37.9 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 11/78 (14%), Positives = 25/78 (32%), Gaps = 17/78 (21%) Query: 3 LSRQLNCLGGLF-DW------------DNAVQRLSFLNTKTEDPHLWQNVIE---AKMLM 46 L ++L L D + QRL FL T + + + + + Sbjct: 8 LQKKLQELESFLKDVFSLNPLDHNLHSQDIEQRLEFLKTLLSA-EITSSPEKPHHLQHIS 66 Query: 47 RERQHLDNAISFIKEIQD 64 + L++ + + + Sbjct: 67 KRLSELESIVRDWHDYKT 84 >gi|195150095|ref|XP_002015990.1| GL10726 [Drosophila persimilis] gi|194109837|gb|EDW31880.1| GL10726 [Drosophila persimilis] Length = 181 Score = 37.9 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 2/86 (2%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 ++ ES+ R SG GGQ VN T + V + H+PT + ++C R KN+ +A +L Sbjct: 67 PKLQESEIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITIKCHTHRLASKNRVEARKLL 126 Query: 281 RAKLYELELQKR--EEIANIGESSKT 304 KL + + E K+ Sbjct: 127 LDKLDAHFNGENSIAAQIKVLEQRKS 152 >gi|289663375|ref|ZP_06484956.1| peptide chain release factor 2 [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289668831|ref|ZP_06489906.1| peptide chain release factor 2 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 48 Score = 37.9 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 20/40 (50%) Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 W + A+ L RER L+ + I ++ L D LLEL Sbjct: 2 WNDAERAQALGRERSMLEKTVIGIADVLSGLADAGDLLEL 41 >gi|253571378|ref|ZP_04848785.1| ABC transporter ATP-binding protein [Bacteroides sp. 1_1_6] gi|251839331|gb|EES67415.1| ABC transporter ATP-binding protein [Bacteroides sp. 1_1_6] Length = 680 Score = 37.9 bits (86), Expect = 2.4, Method: Composition-based stats. Identities = 10/74 (13%), Positives = 31/74 (41%), Gaps = 5/74 (6%) Query: 2 KLSRQLNCL-GGLFDWDNAVQR----LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56 +L++++ L + D + +++ ++ L K P ++ + + +Q LD + Sbjct: 606 ELNKKIKKLERQVADCEASIEETESAIAILEAKMATPEGASDMQLYERHQKLKQQLDTTV 665 Query: 57 SFIKEIQDRLCDNL 70 + + L + Sbjct: 666 EEWERVSMELEEVK 679 >gi|281207985|gb|EFA82163.1| hypothetical protein PPL_04583 [Polysphondylium pallidum PN500] Length = 2079 Score = 37.9 bits (86), Expect = 2.5, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 36/122 (29%), Gaps = 7/122 (5%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNV-IEA-KMLMRERQHLDNAISF 58 ++L + L + +R S L +A + L RER LD+ Sbjct: 496 LQLKETIAGLES-----DLEKRSSELRETLSASESINTQMKKADEKLSRERSTLDSLTER 550 Query: 59 IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118 ++ ++ + ++ + + + L+ + + Sbjct: 551 YNKLNSEFEESDKHCKSLTQQIVETNEKLQLAEQAKQDLQSTNTKLNEDTAKLQSDLQER 610 Query: 119 LE 120 +E Sbjct: 611 VE 612 >gi|329735442|gb|EGG71731.1| ABC transporter, ATP-binding protein [Staphylococcus epidermidis VCU028] Length = 644 Score = 37.9 bits (86), Expect = 2.5, Method: Composition-based stats. Identities = 5/55 (9%), Positives = 25/55 (45%), Gaps = 4/55 (7%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF----IKEIQDRL 66 + ++S + + P ++ + ++A ++ ++ + +++Q++L Sbjct: 590 IEELEAQISHIEEQLTQPEVFNDPLKASKFANQKSDIEQKLEQIMLEWEKLQEKL 644 >gi|290953693|ref|ZP_06558314.1| hypothetical protein FtulhU_05096 [Francisella tularensis subsp. holarctica URFT1] gi|295312967|ref|ZP_06803679.1| hypothetical protein FtulhU_05081 [Francisella tularensis subsp. holarctica URFT1] Length = 35 Score = 37.9 bits (86), Expect = 2.5, Method: Composition-based stats. Identities = 14/19 (73%), Positives = 15/19 (78%) Query: 300 ESSKTEIGWGRQIRSYVLQ 318 E SK +IGWG QIRSYVL Sbjct: 1 EDSKADIGWGSQIRSYVLD 19 >gi|300767548|ref|ZP_07077458.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300494533|gb|EFK29691.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 660 Score = 37.9 bits (86), Expect = 2.6, Method: Composition-based stats. Identities = 5/47 (10%), Positives = 17/47 (36%), Gaps = 1/47 (2%) Query: 8 NCLGGLF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53 + +F + +R+ L + DP + + + ++ + Sbjct: 85 EEMSSVFAELHAIEKRMHQLENQLSDPAIMNDEQAYQQTLKTYDQIQ 131 >gi|203459047|ref|YP_002224203.1| gp204 [Mycobacterium phage ScottMcG] gi|197312494|gb|ACH62849.1| gp204 [Mycobacterium phage ScottMcG] Length = 118 Score = 37.9 bits (86), Expect = 2.6, Method: Composition-based stats. Identities = 27/56 (48%), Positives = 37/56 (66%) Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 DC ++T R SG GGQ+ N D+AVRI H P+G V + Q+ERSQ +NK A+ + Sbjct: 13 DCVVETKRGSGKGGQNRNKRDTAVRIVHPPSGAVGESQEERSQLQNKKTAFRRMAE 68 >gi|28377587|ref|NP_784479.1| ABC transporter, ATP-binding protein [Lactobacillus plantarum WCFS1] gi|28270419|emb|CAD63322.1| ABC transporter, ATP-binding protein [Lactobacillus plantarum WCFS1] Length = 660 Score = 37.9 bits (86), Expect = 2.6, Method: Composition-based stats. Identities = 5/47 (10%), Positives = 17/47 (36%), Gaps = 1/47 (2%) Query: 8 NCLGGLF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53 + +F + +R+ L + DP + + + ++ + Sbjct: 85 EEMSSVFAELHAIEKRMHQLENQLSDPAIMNDEQAYQQTLKTYDQIQ 131 >gi|117921830|ref|YP_871022.1| ABC transporter-like protein [Shewanella sp. ANA-3] gi|117614162|gb|ABK49616.1| ABC transporter related [Shewanella sp. ANA-3] Length = 637 Score = 37.9 bits (86), Expect = 2.6, Method: Composition-based stats. Identities = 10/62 (16%), Positives = 22/62 (35%), Gaps = 3/62 (4%) Query: 15 DWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLMRERQHLDNAISFIK-EIQDRLCDNLI 71 D +RL+ L D L+ N + ++ ER L + + + + + Sbjct: 570 DQQKLSERLAELEHLLADSELYDQDNKAKLTSVLSERTSLTQTLEESEMQWLELQEEIDA 629 Query: 72 LL 73 + Sbjct: 630 ME 631 >gi|284045996|ref|YP_003396336.1| ABC transporter [Conexibacter woesei DSM 14684] gi|283950217|gb|ADB52961.1| ABC transporter related protein [Conexibacter woesei DSM 14684] Length = 644 Score = 37.9 bits (86), Expect = 2.6, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 19/54 (35%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 + ++A LS L + DP W + A+ + +R+ D Sbjct: 591 EIESAEAALSELEAELADPAAWADSERTAASSERHAAAKRAVEELYARYERVAD 644 >gi|68489326|ref|XP_711504.1| hypothetical protein CaO19.12943 [Candida albicans SC5314] gi|68489375|ref|XP_711480.1| hypothetical protein CaO19.5488 [Candida albicans SC5314] gi|46432785|gb|EAK92252.1| hypothetical protein CaO19.5488 [Candida albicans SC5314] gi|46432811|gb|EAK92277.1| hypothetical protein CaO19.12943 [Candida albicans SC5314] gi|238882388|gb|EEQ46026.1| conserved hypothetical protein [Candida albicans WO-1] Length = 171 Score = 37.9 bits (86), Expect = 2.6, Method: Composition-based stats. Identities = 27/54 (50%), Positives = 36/54 (66%) Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286 + G GGQ +N T+S V++THIPTG+VV CQ RSQ +N+A A L KL + Sbjct: 46 HGGRGPGGQKINKTNSKVQLTHIPTGMVVSCQATRSQEQNRAIAREKLALKLDD 99 >gi|70983422|ref|XP_747238.1| conserved hypothetical protein [Aspergillus fumigatus Af293] gi|66844864|gb|EAL85200.1| conserved hypothetical protein [Aspergillus fumigatus Af293] gi|159123756|gb|EDP48875.1| conserved hypothetical protein [Aspergillus fumigatus A1163] Length = 1142 Score = 37.9 bits (86), Expect = 2.6, Method: Composition-based stats. Identities = 10/90 (11%), Positives = 28/90 (31%), Gaps = 7/90 (7%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL +N L + N ++ + + + + L++ + L+ ++ +K Sbjct: 554 KLKNTINELR--MELGNLEEKRKDIEESLAEAEKFN-----QELLQTKSELEGQVATLKT 606 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDN 91 + +E+ L Sbjct: 607 NIKEAQEAHEQELERQKEERAEALANQKQE 636 >gi|315920342|ref|ZP_07916582.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides sp. D2] gi|313694217|gb|EFS31052.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides sp. D2] Length = 670 Score = 37.9 bits (86), Expect = 2.7, Method: Composition-based stats. Identities = 9/74 (12%), Positives = 31/74 (41%), Gaps = 5/74 (6%) Query: 2 KLSRQLNCL-GGLFDWDNAVQR----LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56 +L++++ L + D + +++ ++ + K P ++ + + +Q LD + Sbjct: 596 ELNKKIKKLERQVADCEASIEETESAIAIVEAKMATPEGASDMQLYERHQKLKQQLDGIV 655 Query: 57 SFIKEIQDRLCDNL 70 + + L + Sbjct: 656 EEWERVSMELEEAK 669 >gi|324558223|gb|ADY49829.1| Peptide chain release factor 1 [Ascaris suum] Length = 51 Score = 37.9 bits (86), Expect = 2.7, Method: Composition-based stats. Identities = 23/48 (47%), Positives = 32/48 (66%) Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270 + + +I+T RASG GGQ+VN +AVR+TH +G+ V C ER QH Sbjct: 1 MPSNSVKIETMRASGPGGQNVNKRSTAVRVTHKSSGISVHCMDERFQH 48 >gi|224369062|ref|YP_002603226.1| hypothetical protein HRM2_19610 [Desulfobacterium autotrophicum HRM2] gi|223691779|gb|ACN15062.1| hypothetical protein HRM2_19610 [Desulfobacterium autotrophicum HRM2] Length = 118 Score = 37.9 bits (86), Expect = 2.8, Method: Composition-based stats. Identities = 26/62 (41%), Positives = 37/62 (59%) Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 I+++D + SG GGQ VN T AV + H+PTG+ V+C ERSQH N+ A L Sbjct: 21 INKADIEEKFVKGSGRGGQKVNKTSVAVFLRHLPTGITVKCGSERSQHLNRFLALRRLVD 80 Query: 283 KL 284 ++ Sbjct: 81 RI 82 >gi|293371621|ref|ZP_06618032.1| ABC transporter, ATP-binding protein [Bacteroides ovatus SD CMC 3f] gi|292633318|gb|EFF51888.1| ABC transporter, ATP-binding protein [Bacteroides ovatus SD CMC 3f] Length = 651 Score = 37.9 bits (86), Expect = 2.8, Method: Composition-based stats. Identities = 9/74 (12%), Positives = 31/74 (41%), Gaps = 5/74 (6%) Query: 2 KLSRQLNCL-GGLFDWDNAVQR----LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56 +L++++ L + D + +++ ++ + K P ++ + + +Q LD + Sbjct: 577 ELNKKIKKLERQVADCEASIEETESAIAIVEAKMATPEGASDMQLYERHQKLKQQLDGIV 636 Query: 57 SFIKEIQDRLCDNL 70 + + L + Sbjct: 637 EEWERVSMELEEAK 650 >gi|260172031|ref|ZP_05758443.1| ABC transporter ATP-binding protein [Bacteroides sp. D2] Length = 651 Score = 37.9 bits (86), Expect = 2.8, Method: Composition-based stats. Identities = 9/74 (12%), Positives = 31/74 (41%), Gaps = 5/74 (6%) Query: 2 KLSRQLNCL-GGLFDWDNAVQR----LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56 +L++++ L + D + +++ ++ + K P ++ + + +Q LD + Sbjct: 577 ELNKKIKKLERQVADCEASIEETESAIAIVEAKMATPEGASDMQLYERHQKLKQQLDGIV 636 Query: 57 SFIKEIQDRLCDNL 70 + + L + Sbjct: 637 EEWERVSMELEEAK 650 >gi|255718823|ref|XP_002555692.1| KLTH0G15158p [Lachancea thermotolerans] gi|238937076|emb|CAR25255.1| KLTH0G15158p [Lachancea thermotolerans] Length = 155 Score = 37.9 bits (86), Expect = 2.8, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 11/84 (13%) Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE---- 288 + G GGQ +N +S V++ H+P+G+VV+CQ+ RS+ +N+ A L ++ + + Sbjct: 42 HGGRGPGGQKINKCNSKVQLKHLPSGIVVECQETRSRDQNRKLAREKLALRIAQWQGGGG 101 Query: 289 -------LQKREEIANIGESSKTE 305 L + E + K++ Sbjct: 102 PVAREVALHEWERQGKRSKERKSK 125 >gi|304390874|ref|ZP_07372826.1| ABC superfamily ATP binding cassette transporter, ABC protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304325757|gb|EFL93003.1| ABC superfamily ATP binding cassette transporter, ABC protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 560 Score = 37.9 bits (86), Expect = 2.8, Method: Composition-based stats. Identities = 30/193 (15%), Positives = 53/193 (27%), Gaps = 14/193 (7%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 G+++ + R + ++ + DP + LM E L AI Sbjct: 91 EGVWEIKAKLDRYNEISAQMADPD-----ADFDALMEEMGQLQEAIDAADAWDLDSQLEQ 145 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + L D + + +R+ L + LL + +N ES Sbjct: 146 AMDALRCPPADADVKTLSGGERRRVALCKLLLEAPDLLLLDEPTNHL---------DAES 196 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 W L Y L+ G A + L N +L+ +Q + Sbjct: 197 VLWLEQHLSQYKGAVIAVTHDRYFLDHVAGWIAEVDRGHLYPYEGNYSTYLEKKQERLEV 256 Query: 191 VRISPYDSNSRRH 203 R Sbjct: 257 QGRKDAKLQKRLK 269 >gi|237719583|ref|ZP_04550064.1| ABC transporter ATP-binding protein [Bacteroides sp. 2_2_4] gi|298482501|ref|ZP_07000687.1| ABC transporter, ATP-binding protein [Bacteroides sp. D22] gi|229450852|gb|EEO56643.1| ABC transporter ATP-binding protein [Bacteroides sp. 2_2_4] gi|298271480|gb|EFI13055.1| ABC transporter, ATP-binding protein [Bacteroides sp. D22] Length = 651 Score = 37.9 bits (86), Expect = 2.8, Method: Composition-based stats. Identities = 9/74 (12%), Positives = 31/74 (41%), Gaps = 5/74 (6%) Query: 2 KLSRQLNCL-GGLFDWDNAVQR----LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56 +L++++ L + D + +++ ++ + K P ++ + + +Q LD + Sbjct: 577 ELNKKIKKLERQVADCEASIEETESAIAIVEAKMATPEGASDMQLYERHQKLKQQLDGIV 636 Query: 57 SFIKEIQDRLCDNL 70 + + L + Sbjct: 637 EEWERVSMELEEAK 650 >gi|154251352|ref|YP_001412176.1| ABC transporter-like protein [Parvibaculum lavamentivorans DS-1] gi|154155302|gb|ABS62519.1| ABC transporter related [Parvibaculum lavamentivorans DS-1] Length = 599 Score = 37.9 bits (86), Expect = 2.8, Method: Composition-based stats. Identities = 10/71 (14%), Positives = 21/71 (29%), Gaps = 10/71 (14%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQHLDNAISFIK 60 +L ++ L + + + K DP L+ + M L ++ + Sbjct: 533 ELQTRMPEL---------AREIENVEKKLADPDLYARDPELFHKTMTRHDALKAELASAE 583 Query: 61 EIQDRLCDNLI 71 E L Sbjct: 584 EHWLELEMKRE 594 >gi|108757726|ref|YP_631538.1| ABC transporter ATP-binding protein [Myxococcus xanthus DK 1622] gi|108461606|gb|ABF86791.1| ABC transporter, ATP-binding protein [Myxococcus xanthus DK 1622] Length = 657 Score = 37.9 bits (86), Expect = 2.8, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 27/68 (39%), Gaps = 15/68 (22%) Query: 15 DWDNAVQRLSFLNT-------KTEDPHLWQNVIEAKMLM------RERQHLDNAISFIKE 61 + R++ + + DP L+ + AK LM +E L++ + + Sbjct: 587 EIAKLEARIAEVEAGQKEREAQLADPALYNDFARAKPLMDTHRASKE--ELEDLYARWEA 644 Query: 62 IQDRLCDN 69 Q++L + Sbjct: 645 AQEKLAEA 652 >gi|254498257|ref|ZP_05110999.1| peptide chain release factor [Legionella drancourtii LLAP12] gi|254352506|gb|EET11299.1| peptide chain release factor [Legionella drancourtii LLAP12] Length = 135 Score = 37.5 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 41/83 (49%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 ++ I+E SG GGQ ++ T S V + H+P+G+ ++CQ+ RS+ N+ A Sbjct: 14 MEKLHINEDSLIEKFIIGSGKGGQKLHKTASTVYLKHVPSGIEIKCQESRSREGNRYFAR 73 Query: 278 NMLRAKLYELELQKREEIANIGE 300 L K + + ++ + E Sbjct: 74 VRLCEKYHAIISDEKTKEQQRVE 96 >gi|160885652|ref|ZP_02066655.1| hypothetical protein BACOVA_03655 [Bacteroides ovatus ATCC 8483] gi|156109274|gb|EDO11019.1| hypothetical protein BACOVA_03655 [Bacteroides ovatus ATCC 8483] Length = 651 Score = 37.5 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 9/74 (12%), Positives = 31/74 (41%), Gaps = 5/74 (6%) Query: 2 KLSRQLNCL-GGLFDWDNAVQR----LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56 +L++++ L + D + +++ ++ + K P ++ + + +Q LD + Sbjct: 577 ELNKKIKKLERQVADCEASIEETESAIAIVEAKMATPEGASDMQLYERHQKLKQQLDGIV 636 Query: 57 SFIKEIQDRLCDNL 70 + + L + Sbjct: 637 EEWERVSMELEEAK 650 >gi|187477916|ref|YP_785940.1| ABC transporter ATP-binding protein [Bordetella avium 197N] gi|115422502|emb|CAJ49027.1| ABC transporter ATP-binding protein [Bordetella avium 197N] Length = 640 Score = 37.5 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 26/74 (35%), Gaps = 8/74 (10%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEA--KMLMRERQHLDNAI---- 56 L +L+ + + + RL L+ D L+ + + +M E L + Sbjct: 566 LQARLSKVES--EMEKLRVRLQTLDALIADADLYSDARRTERQQVMAEHGELGKRMGTLE 623 Query: 57 SFIKEIQDRLCDNL 70 EIQ L + Sbjct: 624 EEWLEIQTSLEEID 637 >gi|29349217|ref|NP_812720.1| ABC transporter ATP-binding protein [Bacteroides thetaiotaomicron VPI-5482] gi|29341125|gb|AAO78914.1| ABC transporter ATP-binding protein [Bacteroides thetaiotaomicron VPI-5482] Length = 651 Score = 37.5 bits (85), Expect = 2.8, Method: Composition-based stats. Identities = 10/74 (13%), Positives = 31/74 (41%), Gaps = 5/74 (6%) Query: 2 KLSRQLNCL-GGLFDWDNAVQR----LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56 +L++++ L + D + +++ ++ L K P ++ + + +Q LD + Sbjct: 577 ELNKKIKKLERQVADCEASIEETESAIAILEAKMATPEGASDMQLYERHQKLKQQLDTTV 636 Query: 57 SFIKEIQDRLCDNL 70 + + L + Sbjct: 637 EEWERVSMELEEVK 650 >gi|124009950|ref|ZP_01694615.1| ABC transporter, ATP-binding protein [Microscilla marina ATCC 23134] gi|123984034|gb|EAY24412.1| ABC transporter, ATP-binding protein [Microscilla marina ATCC 23134] Length = 642 Score = 37.5 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 4/56 (7%), Positives = 20/56 (35%), Gaps = 4/56 (7%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI----SFIKEIQDRLCDNLI 71 ++ + K D ++ + + + +E + + +E+ ++ + Sbjct: 585 EKKQEEIELKLADNTIYNDPEKLEKTQQEFAKVQEELAAANDAWEELVMKIDELEA 640 >gi|113969085|ref|YP_732878.1| ABC transporter-like protein [Shewanella sp. MR-4] gi|114048771|ref|YP_739321.1| ABC transporter-like protein [Shewanella sp. MR-7] gi|113883769|gb|ABI37821.1| ABC transporter related [Shewanella sp. MR-4] gi|113890213|gb|ABI44264.1| ABC transporter related [Shewanella sp. MR-7] Length = 637 Score = 37.5 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 22/62 (35%), Gaps = 6/62 (9%) Query: 15 DWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLMRERQHLDNAIS----FIKEIQDRLCD 68 D +RL+ L D L+ N + ++ ER L + E+Q+ + Sbjct: 570 DQQKLSERLAELEHLLADSELYDQDNKAKLTSVLSERTSLTQTLEESEMQWLELQEEIDS 629 Query: 69 NL 70 Sbjct: 630 ME 631 >gi|294673355|ref|YP_003573971.1| ABC transporter ATP-binding protein [Prevotella ruminicola 23] gi|294473067|gb|ADE82456.1| ABC transporter, ATP-binding protein [Prevotella ruminicola 23] Length = 662 Score = 37.5 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 11/73 (15%), Positives = 24/73 (32%), Gaps = 5/73 (6%) Query: 2 KLSRQLNCLGGLFD-----WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56 +L ++ N L + QRL L+ P ++ ++ LD + Sbjct: 588 ELQKRKNRLEKAVKQHEAKIEQLEQRLKELDELLMQPENASDMTMVTEYTGIKRDLDEEV 647 Query: 57 SFIKEIQDRLCDN 69 ++ + L Sbjct: 648 ERWEKASEELESL 660 >gi|184154799|ref|YP_001843139.1| ABC transporter ATP-binding component [Lactobacillus fermentum IFO 3956] gi|183226143|dbj|BAG26659.1| ABC transporter ATP-binding component [Lactobacillus fermentum IFO 3956] Length = 647 Score = 37.5 bits (85), Expect = 2.9, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 25/60 (41%), Gaps = 2/60 (3%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL R + L + ++ + T+ DP + ++ + L +E L + ++E Sbjct: 576 KLQRTVADLEEQM--NQLGEQQEQVETQMADPDVATDIGKLTDLQKELDALTKQLEDVEE 633 >gi|302335693|ref|YP_003800900.1| ABC transporter related protein [Olsenella uli DSM 7084] gi|301319533|gb|ADK68020.1| ABC transporter related protein [Olsenella uli DSM 7084] Length = 671 Score = 37.5 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 18/58 (31%), Gaps = 2/58 (3%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 R+L + + R L L+ + M E L I+ ++E Sbjct: 601 RRRLRQVESALEPAQ--TRYQELMELMASEELYADAARFDQCMGEYNALSKKIASLEE 656 >gi|296126911|ref|YP_003634163.1| AAA ATPase [Brachyspira murdochii DSM 12563] gi|296018727|gb|ADG71964.1| AAA ATPase [Brachyspira murdochii DSM 12563] Length = 1284 Score = 37.5 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 22/218 (10%), Positives = 60/218 (27%), Gaps = 2/218 (0%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78 +++ + K D + + + + L +E +++ IS +K L + L Sbjct: 682 LKSKMNEIRDKMSDADISDD--DYEKLSKEFRNIKKEISQLKNNSFELKETYKALLDESI 739 Query: 79 EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138 + + + T+ + I + + + + + + + L Sbjct: 740 IKEYNDTKNTNIIKECIDKNILKIEKIKNVFNNIEEYSNTYKYSLKEEDIKELENNFKSL 799 Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198 + + ++ + ++ I + R + +S Sbjct: 800 QGRIKIIDEEEINLRNSINDTNKKIRNIKKETNIPENTPNSEIYNVLSSKRDEAKTLLES 859 Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236 F S E++ DTY S Sbjct: 860 QKEFRDKFGSFIKDFNERLEHVDINYENEYFKDTYINS 897 >gi|198276135|ref|ZP_03208666.1| hypothetical protein BACPLE_02324 [Bacteroides plebeius DSM 17135] gi|198270947|gb|EDY95217.1| hypothetical protein BACPLE_02324 [Bacteroides plebeius DSM 17135] Length = 644 Score = 37.5 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 8/74 (10%), Positives = 28/74 (37%), Gaps = 5/74 (6%) Query: 2 KLSRQLNCLGG-LFDWDNAVQRLSF----LNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56 +L++++ L + D + +++L L + P ++ + + ++ + A Sbjct: 571 ELNKKIRKLEKQVADCEAKIEKLEEQVAQLEEQMATPEGASDMKLYEQHQQLKKQIAEAE 630 Query: 57 SFIKEIQDRLCDNL 70 + L + Sbjct: 631 EEWTLLLSELEEMK 644 >gi|242241814|ref|ZP_04796259.1| ABC superfamily ATP binding cassette transporter, ABC protein [Staphylococcus epidermidis W23144] gi|242234732|gb|EES37043.1| ABC superfamily ATP binding cassette transporter, ABC protein [Staphylococcus epidermidis W23144] Length = 644 Score = 37.5 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 6/55 (10%), Positives = 25/55 (45%), Gaps = 4/55 (7%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQH----LDNAISFIKEIQDRL 66 + ++S + + P ++ + ++A ++ L+ + +++Q++L Sbjct: 590 IEELESQISHIEEQLTQPEVFNDPLKASKFANQKSETEQKLEQIMLEWEKLQEKL 644 >gi|298345317|ref|YP_003718004.1| ABC transporter ATP-binding protein [Mobiluncus curtisii ATCC 43063] gi|298235378|gb|ADI66510.1| ABC superfamily ATP binding cassette transporter, ABC protein [Mobiluncus curtisii ATCC 43063] Length = 560 Score = 37.5 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 30/193 (15%), Positives = 54/193 (27%), Gaps = 14/193 (7%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 G+++ + + R + ++ + DP + LM E L AI Sbjct: 91 EGVWEIKSKLDRYNEISAQMADPD-----ADFDALMEEMGQLQEAIDAADAWDLDSQLEQ 145 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 + L D + + +R+ L + LL + +N ES Sbjct: 146 AMDALRCPPADADVKTLSGGERRRVALCKLLLEAPDLLLLDEPTNHL---------DAES 196 Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190 W L Y L+ G A + L N +L+ +Q + Sbjct: 197 VLWLEQHLSQYKGAVIAVTHDRYFLDHVAGWIAEVDRGHLYPYEGNYSTYLEKKQERLEV 256 Query: 191 VRISPYDSNSRRH 203 R Sbjct: 257 QGRKDAKLQKRLK 269 >gi|147903393|ref|NP_001090775.1| integrin, beta 6 [Xenopus (Silurana) tropicalis] gi|134023735|gb|AAI35122.1| LOC100037861 protein [Xenopus (Silurana) tropicalis] Length = 696 Score = 37.5 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 26/219 (11%), Positives = 49/219 (22%), Gaps = 9/219 (4%) Query: 52 LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111 L I+ KE++ + L +L ++ + ++ + +S Sbjct: 361 LQLIINAYKELRSEIE--LEVLGDTEGLSLSFTALCNNNTAIPHSKKCQHLKVGDRVSFS 418 Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171 A E H + L + + E ++ + Sbjct: 419 VSITSASCEKHTRHIVIKPVGLEESLEVEIQSECSCQCHREERSSECSKGNGALECGVCV 478 Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDS-NSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230 P + +G DS R YP V I Sbjct: 479 CYPPYLGDHCQCNEGSLNSSSCKELDSCGGRGECYCGQCICYPSVYGRI---YGSHCECD 535 Query: 231 DTYRASGAG---GQHVNTTDSAVRITHIPTGVVVQCQQE 266 D G H + +G C + Sbjct: 536 DFSCLRHRGVICAGHGDCECGECICHSGWSGSYCNCTMD 574 >gi|15614867|ref|NP_243170.1| nucleotide sugar epimerase [Bacillus halodurans C-125] gi|10174924|dbj|BAB06023.1| nucleotide sugar epimerase [Bacillus halodurans C-125] Length = 315 Score = 37.5 bits (85), Expect = 3.0, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 8/70 (11%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTEDP-HLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 ++ L +F D +L FL +P W ++ +A+ L+R + ++ I+ Sbjct: 252 ISMLESIFQKDA---KLQFLEKPFGEPMSTWADISKAEKLLR----YSPNVPLLQGIEKE 304 Query: 66 LCDNLILLEL 75 + D L L ++ Sbjct: 305 VDDLLDLYQI 314 >gi|260663173|ref|ZP_05864065.1| ABC transporter ATP-binding component [Lactobacillus fermentum 28-3-CHN] gi|260552365|gb|EEX25416.1| ABC transporter ATP-binding component [Lactobacillus fermentum 28-3-CHN] Length = 647 Score = 37.5 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 25/60 (41%), Gaps = 2/60 (3%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL R + L + ++ + T+ DP + ++ + L +E L + ++E Sbjct: 576 KLQRTVADLEEQM--NQLGEQQEQVETQMADPDVATDIGKLTDLQKELDALTKQLEDVEE 633 >gi|331084080|ref|ZP_08333187.1| hypothetical protein HMPREF0992_02111 [Lachnospiraceae bacterium 6_1_63FAA] gi|330402442|gb|EGG82012.1| hypothetical protein HMPREF0992_02111 [Lachnospiraceae bacterium 6_1_63FAA] Length = 636 Score = 37.5 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 10/51 (19%), Positives = 20/51 (39%), Gaps = 4/51 (7%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQH----LDNAISFIKEI 62 + R S ++ + P + NV E L +E+ L+ +E+ Sbjct: 584 IEELETRDSEIDEEMAKPEVATNVAECVRLSKEKAEIAQKLEELYEKWEEL 634 >gi|227513690|ref|ZP_03943739.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus buchneri ATCC 11577] gi|227083009|gb|EEI18321.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus buchneri ATCC 11577] Length = 652 Score = 37.5 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 32/73 (43%), Gaps = 6/73 (8%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---- 57 KL+R++ L D + + + ++ P ++ ++ +A L ++ + +D I Sbjct: 582 KLNREVTDLES--QLDELSKSKNNIESQMAQPEVFNDLDKASDLQKKLEMIDQKIKETES 639 Query: 58 FIKEIQDRLCDNL 70 ++ +L D Sbjct: 640 KWEQKSLQLEDIE 652 >gi|260587629|ref|ZP_05853542.1| ABC transporter, ATP-binding protein [Blautia hansenii DSM 20583] gi|260541894|gb|EEX22463.1| ABC transporter, ATP-binding protein [Blautia hansenii DSM 20583] Length = 636 Score = 37.5 bits (85), Expect = 3.1, Method: Composition-based stats. Identities = 10/51 (19%), Positives = 20/51 (39%), Gaps = 4/51 (7%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQH----LDNAISFIKEI 62 + R S ++ + P + NV E L +E+ L+ +E+ Sbjct: 584 IEELETRDSEIDEEMAKPEVATNVAECVRLSKEKAEIAQKLEELYEKWEEL 634 >gi|320104951|ref|YP_004180542.1| ABC transporter-like protein [Isosphaera pallida ATCC 43644] gi|319752233|gb|ADV63993.1| ABC transporter related protein [Isosphaera pallida ATCC 43644] Length = 644 Score = 37.5 bits (85), Expect = 3.2, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 20/54 (37%), Gaps = 1/54 (1%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKEIQDRLC 67 D +A +L+ L + DP ++N AK L + ++ L Sbjct: 588 DIAHAEAQLAELEVQLADPETYKNPERAKACKLRHDQLTADLERLYAHWEEALE 641 >gi|291522361|emb|CBK80654.1| ATPase components of ABC transporters with duplicated ATPase domains [Coprococcus catus GD/7] Length = 645 Score = 37.5 bits (85), Expect = 3.3, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 27/69 (39%), Gaps = 1/69 (1%) Query: 4 SRQLNCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 ++ N L + D RL L+ ++ NV + +E++ LD + E+ Sbjct: 574 RKRKNQLKKTMERIDAIDARLKELDELLVQEDVYTNVSRLMEINKEKEALDEEQLTLMEL 633 Query: 63 QDRLCDNLI 71 + L + Sbjct: 634 WEELEGDDD 642 >gi|255725070|ref|XP_002547464.1| conserved hypothetical protein [Candida tropicalis MYA-3404] gi|240135355|gb|EER34909.1| conserved hypothetical protein [Candida tropicalis MYA-3404] Length = 172 Score = 37.5 bits (85), Expect = 3.4, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 45/102 (44%) Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246 + V+ ++ ++ + + + E + G GGQ +N Sbjct: 1 MFNRVQSLQRQLSTSTRVFYAIPKINKLPPRPKHLIKEEELEEKFLHGGRGPGGQKINKC 60 Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 +S V++ HIPTG+V+ CQ RS+ +N+A A L KL + Sbjct: 61 NSKVQLKHIPTGIVIDCQATRSKEQNRAIAREKLALKLDDYY 102 >gi|299147511|ref|ZP_07040576.1| ABC transporter, ATP-binding protein [Bacteroides sp. 3_1_23] gi|298514789|gb|EFI38673.1| ABC transporter, ATP-binding protein [Bacteroides sp. 3_1_23] Length = 651 Score = 37.5 bits (85), Expect = 3.4, Method: Composition-based stats. Identities = 9/74 (12%), Positives = 31/74 (41%), Gaps = 5/74 (6%) Query: 2 KLSRQLNCL-GGLFDWDNAVQR----LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56 +L++++ L + D + +++ ++ + K P ++ + + +Q LD + Sbjct: 577 ELNKKIKKLERQVADCEASIEETESAIAIVEAKMATPEGASDMQLYERHQKLKQQLDGIV 636 Query: 57 SFIKEIQDRLCDNL 70 + + L + Sbjct: 637 EEWERVSMELEETK 650 >gi|228474487|ref|ZP_04059221.1| ATP-binding ABC transporter protein [Staphylococcus hominis SK119] gi|228271571|gb|EEK12931.1| ATP-binding ABC transporter protein [Staphylococcus hominis SK119] Length = 645 Score = 37.5 bits (85), Expect = 3.4, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 30/56 (53%), Gaps = 6/56 (10%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEA-----KMLMRERQHLDNAISFIKEIQDRL 66 + + ++ ++ + P ++ + I+A + L E Q L+N ++ +E+Q+++ Sbjct: 591 IEKYEEHITQIDQQLTQPDIFNDPIKANELAEQKLSIE-QQLENVMAEWEELQEKI 645 >gi|228476899|ref|ZP_04061544.1| ABC transporter ATP binding protein [Streptococcus salivarius SK126] gi|228251473|gb|EEK10618.1| ABC transporter ATP binding protein [Streptococcus salivarius SK126] Length = 639 Score = 37.5 bits (85), Expect = 3.4, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 29/70 (41%), Gaps = 9/70 (12%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL----DNAIS 57 KLSR++ + + + +RL ++ + +V E L +E L + + Sbjct: 574 KLSRRIEQIEN--ELETIEERLEEISAAMLE---TNDVAELSDLQKELDDLSVSQEALME 628 Query: 58 FIKEIQDRLC 67 ++ ++L Sbjct: 629 EWSDLSEQLE 638 >gi|311748330|ref|ZP_07722115.1| ABC transporter, ATP-binding protein [Algoriphagus sp. PR1] gi|126576838|gb|EAZ81086.1| ABC transporter, ATP-binding protein [Algoriphagus sp. PR1] Length = 559 Score = 37.5 bits (85), Expect = 3.4, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 37/103 (35%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 N ++ +N K DP L ++ L+ + + + + + + + L L Sbjct: 101 NLLKEFEEINEKFMDPALMEDPDAMNKLIERQGEVQEKLDAANAWELDVMLDKAMDALRL 160 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 D ++ + +R+ L Q +L + +N E Sbjct: 161 PPSDANVENLSGGEKRRVALCRLLLQEPDVLLLDEPTNHLDAE 203 >gi|108756949|ref|YP_630627.1| ABC transporter ATP-binding protein [Myxococcus xanthus DK 1622] gi|108460829|gb|ABF86014.1| ABC transporter, ATP-binding protein [Myxococcus xanthus DK 1622] Length = 642 Score = 37.5 bits (85), Expect = 3.4, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 3/57 (5%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 + A R + L + DP ++ N + + +E LD A++ + + R + L Sbjct: 584 IEAAESRKAGLEAQLADPAVYSNGPKVAEVQKE---LDAAVAEVDRLYTRWQELQDL 637 >gi|126651454|ref|ZP_01723658.1| ABC transporter (ATP-binding protein) [Bacillus sp. B14905] gi|126591707|gb|EAZ85803.1| ABC transporter (ATP-binding protein) [Bacillus sp. B14905] Length = 647 Score = 37.5 bits (85), Expect = 3.4, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 26/77 (33%), Gaps = 1/77 (1%) Query: 8 NCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 + + +F+ Q L L + DP +++N +M E L + Q Sbjct: 85 DEMMTIFEPLLAQEQTLRSLEQQMADPTVYENPTLYAKVMSEYDQLQHTFKDAGGYQYES 144 Query: 67 CDNLILLELALEEDDCS 83 +L + +D Sbjct: 145 DIRSVLHGMQFYPEDYD 161 >gi|314935996|ref|ZP_07843345.1| ABC transporter, ATP-binding protein [Staphylococcus hominis subsp. hominis C80] gi|313655813|gb|EFS19556.1| ABC transporter, ATP-binding protein [Staphylococcus hominis subsp. hominis C80] Length = 645 Score = 37.5 bits (85), Expect = 3.4, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 30/56 (53%), Gaps = 6/56 (10%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEA-----KMLMRERQHLDNAISFIKEIQDRL 66 + + ++ ++ + P ++ + I+A + L E Q L+N ++ +E+Q+++ Sbjct: 591 IEKYEEHITQIDQQLTQPDIFNDPIKANELAEQKLSIE-QQLENVMAEWEELQEKI 645 >gi|323340147|ref|ZP_08080411.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus ruminis ATCC 25644] gi|323092338|gb|EFZ34946.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus ruminis ATCC 25644] Length = 650 Score = 37.5 bits (85), Expect = 3.5, Method: Composition-based stats. Identities = 9/73 (12%), Positives = 26/73 (35%), Gaps = 3/73 (4%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L R + L + + + L + P + ++ + L + Q + ++ +E Sbjct: 579 RLKRSVEEFEQL--VEKLDAQKNDLENQMSSPENYNDLEKMGELQAKLQEISKKLAEAEE 636 Query: 62 -IQDRLCDNLILL 73 + + L Sbjct: 637 NWEQASMELEEFL 649 >gi|237715209|ref|ZP_04545690.1| ABC transporter ATP-binding protein [Bacteroides sp. D1] gi|262405054|ref|ZP_06081604.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294645143|ref|ZP_06722867.1| ABC transporter, ATP-binding protein [Bacteroides ovatus SD CC 2a] gi|294808700|ref|ZP_06767434.1| ABC transporter, ATP-binding protein [Bacteroides xylanisolvens SD CC 1b] gi|229444518|gb|EEO50309.1| ABC transporter ATP-binding protein [Bacteroides sp. D1] gi|262355929|gb|EEZ05019.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292639526|gb|EFF57820.1| ABC transporter, ATP-binding protein [Bacteroides ovatus SD CC 2a] gi|294444139|gb|EFG12872.1| ABC transporter, ATP-binding protein [Bacteroides xylanisolvens SD CC 1b] Length = 651 Score = 37.5 bits (85), Expect = 3.5, Method: Composition-based stats. Identities = 9/74 (12%), Positives = 31/74 (41%), Gaps = 5/74 (6%) Query: 2 KLSRQLNCL-GGLFDWDNAVQR----LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56 +L++++ L + D + +++ ++ + K P ++ + + +Q LD + Sbjct: 577 ELNKKIKKLERQVADCEASIEETESAIAIVEAKMATPEGASDMQLYERHQKLKQQLDGIV 636 Query: 57 SFIKEIQDRLCDNL 70 + + L + Sbjct: 637 EEWERVSMELEETK 650 >gi|89100197|ref|ZP_01173064.1| ABC transporter ATP-binding protein uup [Bacillus sp. NRRL B-14911] gi|89085047|gb|EAR64181.1| ABC transporter ATP-binding protein uup [Bacillus sp. NRRL B-14911] Length = 639 Score = 37.5 bits (85), Expect = 3.5, Method: Composition-based stats. Identities = 7/47 (14%), Positives = 17/47 (36%), Gaps = 1/47 (2%) Query: 8 NCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53 + + +F L L + DP + + + +++E L Sbjct: 85 DEMLSVFKGLREMEAELRRLEERMADPGAFNDPGSYEKILKEYDLLQ 131 >gi|332701205|ref|ZP_08421293.1| ABC transporter related protein [Desulfovibrio africanus str. Walvis Bay] gi|332551354|gb|EGJ48398.1| ABC transporter related protein [Desulfovibrio africanus str. Walvis Bay] Length = 657 Score = 37.5 bits (85), Expect = 3.6, Method: Composition-based stats. Identities = 8/60 (13%), Positives = 20/60 (33%), Gaps = 4/60 (6%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF----IKEIQDRLCDNL 70 + ++ + R + L T DP + E L E + +++ + + Sbjct: 588 ELESIMARQTELETLLADPATYSKTEEFVRLTSEYKQAKEREEQLFMDFSSLEESITELE 647 >gi|302346561|ref|YP_003814859.1| DNA gyrase, A subunit [Prevotella melaninogenica ATCC 25845] gi|302150295|gb|ADK96556.1| DNA gyrase, A subunit [Prevotella melaninogenica ATCC 25845] Length = 859 Score = 37.5 bits (85), Expect = 3.6, Method: Composition-based stats. Identities = 16/157 (10%), Positives = 37/157 (23%), Gaps = 9/157 (5%) Query: 6 QLNCLGGLFDWDNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 +L+ L G D Q L +D + N K +M+E L +++ Sbjct: 430 RLSQLTG-LRLDQLHQEFEELMQTIKDLQEILNNPERCKEVMKE--ELQEVKEKYGDVRR 486 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 ++ E + + L + + +A Sbjct: 487 T-----EIIPDEHEFNAEDFYPNDPVVITISHLGYIKRTPLADFKEQARGGVGSKGARTR 541 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 + + + + K + Sbjct: 542 EKDFTEYIYPATMHQTMLFFTRKGRCYWMKCYDIPEG 578 >gi|254582148|ref|XP_002497059.1| ZYRO0D14476p [Zygosaccharomyces rouxii] gi|238939951|emb|CAR28126.1| ZYRO0D14476p [Zygosaccharomyces rouxii] Length = 155 Score = 37.5 bits (85), Expect = 3.6, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 12/85 (14%) Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK--------- 283 + G GGQ +N +S V++ H+PTG+VV+CQQ RS+ +N+ A L + Sbjct: 40 HGGRGPGGQKINKCNSKVQLKHLPTGIVVECQQTRSRDQNRKIAREKLALEIERANTPGQ 99 Query: 284 ---LYELELQKREEIANIGESSKTE 305 + E LQ+ + + + K + Sbjct: 100 SGTIREKALQQWHQQSKKSKERKAK 124 >gi|160933764|ref|ZP_02081152.1| hypothetical protein CLOLEP_02625 [Clostridium leptum DSM 753] gi|156867641|gb|EDO61013.1| hypothetical protein CLOLEP_02625 [Clostridium leptum DSM 753] Length = 637 Score = 37.5 bits (85), Expect = 3.7, Method: Composition-based stats. Identities = 10/74 (13%), Positives = 25/74 (33%), Gaps = 6/74 (8%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL----DNAIS 57 KL ++ + D + + L + DP + +A L + + L + + Sbjct: 565 KLKTRVRRAEE--EIDGLDRETAELAGRLSDPETASDYEKALELTQRMEELRARQEKLME 622 Query: 58 FIKEIQDRLCDNLI 71 + + L + Sbjct: 623 SWEALCQELEEKEA 636 >gi|124359162|gb|ABN05685.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago truncatula] Length = 1223 Score = 37.1 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 7/55 (12%) Query: 5 RQLNCLGGLFD---WDNAVQRLSFLNTKTEDPHLWQ----NVIEAKMLMRERQHL 52 + LGG FD + +S L + + LW + K + +E L Sbjct: 248 EDIKQLGGAFDNHNLGKLKKEISRLEERMNNQSLWSGNDEDRCRLKRIEKEHGEL 302 >gi|152975400|ref|YP_001374917.1| ABC transporter-related protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152024152|gb|ABS21922.1| ABC transporter-related protein [Bacillus cytotoxicus NVH 391-98] Length = 630 Score = 37.1 bits (84), Expect = 3.7, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 25/62 (40%), Gaps = 5/62 (8%) Query: 15 DWDNAVQRLSFLNTKTED-----PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69 +WD +++ L K E ++ + +A+ L ++ L+ + E L D Sbjct: 566 EWDTIEDKIAELEEKLEAVGEELANVGSDFTKAQELAEAQEQLEEQLEKAMERWSELSDI 625 Query: 70 LI 71 + Sbjct: 626 VE 627 >gi|330685714|gb|EGG97352.1| hypothetical protein SEVCU121_0789 [Staphylococcus epidermidis VCU121] Length = 34 Score = 37.1 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 5/34 (14%), Positives = 16/34 (47%) Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 +P+ W + A+ ++ + L + ++ E+ Sbjct: 1 MMTEPNFWDDQNRAQDIIDKNNALKSMVNGYYEL 34 >gi|299534446|ref|ZP_07047779.1| ABC transporter ATP-binding protein [Lysinibacillus fusiformis ZC1] gi|298730074|gb|EFI70616.1| ABC transporter ATP-binding protein [Lysinibacillus fusiformis ZC1] Length = 647 Score = 37.1 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 23/80 (28%), Gaps = 3/80 (3%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + + L + L L + DP ++ N +M E L + Q Sbjct: 85 NEMMTIFESLLAQEQL---LRSLEQQMADPTVYDNPTMYAKVMSEYDQLQHTFKDAGGYQ 141 Query: 64 DRLCDNLILLELALEEDDCS 83 +L + +D Sbjct: 142 YESDIRSVLHGMQFYSEDYD 161 >gi|259418312|ref|ZP_05742230.1| putative peptide chain release factor H [Silicibacter sp. TrichCH4B] gi|259345707|gb|EEW57551.1| putative peptide chain release factor H [Silicibacter sp. TrichCH4B] Length = 211 Score = 37.1 bits (84), Expect = 3.8, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 54/150 (36%), Gaps = 5/150 (3%) Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223 G SA +++ G A +GV S +R F I+ P + + Sbjct: 50 GPSSAVVILSGTQASALALSVEGVILWRCQSELRPKHKRKNWFVQIFRLPTTTKVVS--V 107 Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC---QQERSQHKNKAQAWNML 280 + + RA G GGQH N T SA+R + V + RSQH+N+ A L Sbjct: 108 DPASVEMQAIRAGGPGGQHQNKTSSAIRARWVSPHKQVYSVVVRDSRSQHQNRRLALERL 167 Query: 281 RAKLYELELQKREEIANIGESSKTEIGWGR 310 A + + + ++ G Sbjct: 168 AALASAEQAEAEASRRGETWALHGQLKRGE 197 >gi|303324301|ref|XP_003072138.1| Peptidyl-tRNA hydrolase domain containing protein [Coccidioides posadasii C735 delta SOWgp] gi|240111848|gb|EER29993.1| Peptidyl-tRNA hydrolase domain containing protein [Coccidioides posadasii C735 delta SOWgp] Length = 136 Score = 37.1 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 44/88 (50%) Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276 I ES+ + SG GGQ +N T SAV++ H+PT VV+ Q RS+ +N+ A Sbjct: 1 MPPRPTIDESEITGTYLKGSGPGGQKINKTSSAVQLIHLPTNTVVKSQATRSRSQNRKIA 60 Query: 277 WNMLRAKLYELELQKREEIANIGESSKT 304 +L K+ L+ A + E+ + Sbjct: 61 LQILAEKVELLQKGDESRAAIVAETKRK 88 >gi|119946803|ref|YP_944483.1| ABC transporter ATP-binding protein [Psychromonas ingrahamii 37] gi|119865407|gb|ABM04884.1| ABC transporter ATP-binding protein [Psychromonas ingrahamii 37] Length = 638 Score = 37.1 bits (84), Expect = 3.9, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 33/72 (45%), Gaps = 4/72 (5%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAK--MLMRERQHLDNAISFIKE 61 +QL+ L + Q+L + + DP L+++ +A+ L++++ L ++ + Sbjct: 561 KKQLSSSEKLM--EKLSQQLEEIEKQLADPALYEHAQKARLTELLKQQGELKESLEEAEM 618 Query: 62 IQDRLCDNLILL 73 + + L+ Sbjct: 619 AWMDAQEKIELM 630 >gi|328478617|gb|EGF48276.1| ABC transporter ATP-binding protein [Lactobacillus rhamnosus MTCC 5462] Length = 110 Score = 37.1 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 7/38 (18%), Positives = 13/38 (34%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53 +++ L K DP L + M++ L Sbjct: 45 LQAMARQIHDLEAKLGDPKLIADQAAFAATMKQYDQLQ 82 >gi|330989728|gb|EGH87831.1| SMC domain-containing protein [Pseudomonas syringae pv. lachrymans str. M301315] Length = 943 Score = 37.1 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 12/123 (9%), Positives = 35/123 (28%), Gaps = 6/123 (4%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75 A + L + + + + E L++E Q L+ + + ++ + + L Sbjct: 604 IATAKEAYHQLKERLQQQGV-NDPSEYGRLVQEAQRLETELRKLNTLKSQHSELRTTAML 662 Query: 76 ALEEDDCSILQETSD-----NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130 L++ + + + + + + E G + Sbjct: 663 QLDQIQVARRAVSDRRSEFLHATLHENPYVRIELIPYSRDIQGIERSLREALGVPDGKYA 722 Query: 131 QDW 133 D Sbjct: 723 DDL 725 >gi|326797843|ref|YP_004315662.1| ATP-binding cassette protein, ChvD family [Sphingobacterium sp. 21] gi|326548607|gb|ADZ76992.1| ATP-binding cassette protein, ChvD family [Sphingobacterium sp. 21] Length = 560 Score = 37.1 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 20/48 (41%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58 G+ + + +N K P +++N E + LM + L + I Sbjct: 94 EGVAETKAILTEYEEINEKFGLPEVYENPDEMEKLMNRQGELQDKIDA 141 >gi|319427548|gb|ADV55622.1| REG family ATPase, YheS [Shewanella putrefaciens 200] Length = 636 Score = 37.1 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 26/74 (35%), Gaps = 5/74 (6%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLMRERQHLDNAISFIK 60 L R+ L D +RL+ L D L+ N + ++ ER L + + Sbjct: 559 LKRKQTKLET--DQQKLSERLAELEHLLADSELYDQDNKAKLTAVLTERTSLTQTLEDSE 616 Query: 61 -EIQDRLCDNLILL 73 + + + + Sbjct: 617 MQWLELQEEIDAME 630 >gi|146294204|ref|YP_001184628.1| ABC transporter-like protein [Shewanella putrefaciens CN-32] gi|145565894|gb|ABP76829.1| ABC transporter related [Shewanella putrefaciens CN-32] Length = 636 Score = 37.1 bits (84), Expect = 4.0, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 26/74 (35%), Gaps = 5/74 (6%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLMRERQHLDNAISFIK 60 L R+ L D +RL+ L D L+ N + ++ ER L + + Sbjct: 559 LKRKQTKLET--DQQKLSERLAELEHLLADSELYDQDNKAKLTAVLTERTSLTQTLEDSE 616 Query: 61 -EIQDRLCDNLILL 73 + + + + Sbjct: 617 MQWLELQEEIDAME 630 >gi|213962115|ref|ZP_03390379.1| ABC transporter domain protein [Capnocytophaga sputigena Capno] gi|213955121|gb|EEB66439.1| ABC transporter domain protein [Capnocytophaga sputigena Capno] Length = 563 Score = 37.1 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 5/46 (10%), Positives = 17/46 (36%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + + +N + + + + LM ++ L + I + + Sbjct: 103 KLLDEFNHINDLFSLEENYSDPDKMQKLMDKQAELQDKIDALNAWE 148 >gi|198456857|ref|XP_001360468.2| GA15649 [Drosophila pseudoobscura pseudoobscura] gi|198135777|gb|EAL25043.2| GA15649 [Drosophila pseudoobscura pseudoobscura] Length = 181 Score = 37.1 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 2/86 (2%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 ++ ES+ R SG GGQ VN T + V + H+PT + ++C R KN+ +A +L Sbjct: 67 PKLQESEIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITIKCHTHRLASKNRVEARKLL 126 Query: 281 RAKLYELELQKR--EEIANIGESSKT 304 KL + + E K+ Sbjct: 127 LDKLDAHFNGENSIAAQIKVLEHRKS 152 >gi|183221718|ref|YP_001839714.1| putative translation release factor [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|167780140|gb|ABZ98438.1| Putative translation release factor [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 110 Score = 37.1 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 3/77 (3%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 + I ESD + +ASG GGQ+VN +AV + H+PTG V+C RSQ N+ +A Sbjct: 1 MEALGIRESDLKEQFVKASGKGGQNVNKVATAVVLLHLPTGKQVKCSIYRSQGLNRYKAR 60 Query: 278 NMLRAKLYELELQKREE 294 ++L ELE ++R E Sbjct: 61 DLLC---LELEKEQRPE 74 >gi|254519474|ref|ZP_05131530.1| ABC transporter ATP-binding protein [Clostridium sp. 7_2_43FAA] gi|226913223|gb|EEH98424.1| ABC transporter ATP-binding protein [Clostridium sp. 7_2_43FAA] Length = 639 Score = 37.1 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKEIQDR 65 D ++L L + ++ N E++ + +E + L+ I+ +E ++ Sbjct: 586 DISTGEEKLLSLQEELCLEEIYSNPSESERVNKEIKDLEEKIASLYEEWENL 637 >gi|71020659|ref|XP_760560.1| hypothetical protein UM04413.1 [Ustilago maydis 521] gi|46100448|gb|EAK85681.1| hypothetical protein UM04413.1 [Ustilago maydis 521] Length = 1371 Score = 37.1 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 10/69 (14%), Positives = 25/69 (36%), Gaps = 17/69 (24%) Query: 2 KLSRQLNCLGGL-FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 +L ++L L D R+ L+ L +E+Q L+ + ++ Sbjct: 1201 ELEKKLQEFEKLTLDKQELEARVGSLD----------------KLTKEKQELEKKVKQLE 1244 Query: 61 EIQDRLCDN 69 ++ + + Sbjct: 1245 KLSKQNKEL 1253 >gi|159109360|ref|XP_001704945.1| Spindle pole protein, putative [Giardia lamblia ATCC 50803] gi|157433021|gb|EDO77271.1| Spindle pole protein, putative [Giardia lamblia ATCC 50803] Length = 693 Score = 37.1 bits (84), Expect = 4.1, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 61/175 (34%), Gaps = 12/175 (6%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE-IQDRLCDNLILL 73 D + V R+ L T+ +D + A +++ER LD + + I + L+ Sbjct: 330 DLEQKVARIHALETRIQDMN-----QAATSMIKERADLDTLVQSLNATITSLQEELDSLI 384 Query: 74 ELALEEDDCSILQETSDNLQRIK------LEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127 ++++ +++ + K + + + E + AGA Sbjct: 385 AAGKKQEEKHLVEMSDIRGAMQKAVEDVNKQDQENAQLNDRIHELEEALNEARRRAGAAE 444 Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182 +E+ L+ + + E + E +EA I I N+ ++ Sbjct: 445 SEANYIKAELMGLSEKLKEYVSNEKGLAEELTKKEAEIARLQKEIHQHNSEKAMR 499 >gi|296215244|ref|XP_002754058.1| PREDICTED: nesprin-2 [Callithrix jacchus] Length = 6820 Score = 37.1 bits (84), Expect = 4.2, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 45/113 (39%), Gaps = 5/113 (4%) Query: 16 WDNAVQRLSFLNTKTED--PHLWQNVIEAKMLMRER-QHLDNAISFIKEIQDRLCDN--L 70 RL L ++ED P L +++ K L++E + L + +KE+Q D Sbjct: 5823 IKELKSRLQVLKAQSEDPLPELHEDLHNEKELIKELEKSLASWTQNLKELQTMKADLTRH 5882 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 +L+E + + ++ + ++ E L+ N+ E+ A Sbjct: 5883 VLVEDVMVLKEQIEHLHRQWEDLCFRVAIRKQEIEDRLNSWIVFNEKNKELCA 5935 >gi|322514829|ref|ZP_08067848.1| ABC superfamily ATP binding cassette transporter, ABC protein [Actinobacillus ureae ATCC 25976] gi|322119211|gb|EFX91352.1| ABC superfamily ATP binding cassette transporter, ABC protein [Actinobacillus ureae ATCC 25976] Length = 638 Score = 37.1 bits (84), Expect = 4.2, Method: Composition-based stats. Identities = 11/74 (14%), Positives = 28/74 (37%), Gaps = 5/74 (6%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLMRERQHLDNAISFIK 60 L +++ L D + A ++L+ L ++ +N + + ++ + I+ Sbjct: 566 LRKKITQLEK--DLEKASEKLNQLEALLASSEIYEAENKAQLTETLAKQIEAKKVVEEIE 623 Query: 61 -EIQDRLCDNLILL 73 E D +L Sbjct: 624 MEWLDCQEQLEVLF 637 >gi|269925711|ref|YP_003322334.1| ABC transporter related protein [Thermobaculum terrenum ATCC BAA-798] gi|269789371|gb|ACZ41512.1| ABC transporter related protein [Thermobaculum terrenum ATCC BAA-798] Length = 767 Score = 37.1 bits (84), Expect = 4.2, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 2/75 (2%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60 ++L Q+ L + + RL L ED L+Q+ L+ E L + + Sbjct: 564 LRLRAQVQDLET--EISDTEDRLQELQAHLEDDSLYQDREHYYSLLSEYGELQGRLQDLN 621 Query: 61 EIQDRLCDNLILLEL 75 E ++ L LE+ Sbjct: 622 ERWEKKASLLEQLEM 636 >gi|154492953|ref|ZP_02032579.1| hypothetical protein PARMER_02595 [Parabacteroides merdae ATCC 43184] gi|154087258|gb|EDN86303.1| hypothetical protein PARMER_02595 [Parabacteroides merdae ATCC 43184] Length = 562 Score = 37.1 bits (84), Expect = 4.2, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 33/100 (33%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + +N K DP + ++ + L+ + L + I + L + Sbjct: 105 KEYEEVNEKFGDPEILEDPDKMDALINRQAELQDKIDATDAWNLDSRLERAMDALRCPPE 164 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 D + + +R+ L Q +L + +N E Sbjct: 165 DQVVDTLSGGERRRVALCRLLLQQPDILLLDEPTNHLDAE 204 >gi|298208124|ref|YP_003716303.1| hypothetical protein CA2559_07781 [Croceibacter atlanticus HTCC2559] gi|83848045|gb|EAP85915.1| conserved hypothetical transmembrane protein [Croceibacter atlanticus HTCC2559] Length = 624 Score = 37.1 bits (84), Expect = 4.2, Method: Composition-based stats. Identities = 16/113 (14%), Positives = 42/113 (37%), Gaps = 13/113 (11%) Query: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL--- 70 D + +R+ L E + L +E +HL + +K+ + ++ D+ Sbjct: 437 LDPEMTEERIKALEKL---------HEERQKLSKEEKHLKKSEKRLKKFEAKVEDHEKKR 487 Query: 71 -ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 LL+ E+ + + + I+ + + + ++ +EV+ Sbjct: 488 AELLKEKSEKQREAYEKAMVKRAEAIEKRSKKLEDRKEYITKRYKDNKVVEVY 540 >gi|150015477|ref|YP_001307731.1| ABC transporter [Clostridium beijerinckii NCIMB 8052] gi|149901942|gb|ABR32775.1| ABC transporter related [Clostridium beijerinckii NCIMB 8052] Length = 639 Score = 37.1 bits (84), Expect = 4.3, Method: Composition-based stats. Identities = 7/47 (14%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Query: 20 VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKEIQDR 65 + L L + ++ N E++ + +E ++L I ++ ++ Sbjct: 591 EEALEKLQEELCKEEVYSNPSESERVNKEIKNLQETIEKLYEQWEEL 637 >gi|206889859|ref|YP_002249325.1| peptide chain release factor [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741797|gb|ACI20854.1| peptide chain release factor [Thermodesulfovibrio yellowstonii DSM 11347] Length = 114 Score = 37.1 bits (84), Expect = 4.3, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 39/69 (56%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 ++ I ESD + SG GGQ +N T + V + HIP+ + V+C +ERSQ N+ A Sbjct: 18 MQKLGIKESDIEEKFIKCSGHGGQKLNKTSTGVYLKHIPSAIEVKCTKERSQGLNRFFAR 77 Query: 278 NMLRAKLYE 286 ML K+ E Sbjct: 78 RMLVEKIKE 86 >gi|320102860|ref|YP_004178451.1| Class I peptide chain release factor [Isosphaera pallida ATCC 43644] gi|319750142|gb|ADV61902.1| Class I peptide chain release factor [Isosphaera pallida ATCC 43644] Length = 209 Score = 37.1 bits (84), Expect = 4.4, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 2/71 (2%) Query: 217 DSIEIEISESDCRIDTYRA--SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274 + + + + DT R SG GGQ+ N ++A+ + H PTG+ V+ + R Q +N Sbjct: 30 HPAQWDAASLQRQCDTTRTRRSGPGGQNRNKVETAIVLVHRPTGIKVEANERRRQGENLQ 89 Query: 275 QAWNMLRAKLY 285 A LR L Sbjct: 90 VALFRLRIALA 100 >gi|258570383|ref|XP_002543995.1| predicted protein [Uncinocarpus reesii 1704] gi|237904265|gb|EEP78666.1| predicted protein [Uncinocarpus reesii 1704] Length = 162 Score = 37.1 bits (84), Expect = 4.4, Method: Composition-based stats. Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 13/101 (12%) Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275 I ES+ + SG GGQ +N T SAV++ H+PT VV+ Q RS+ +N+ Sbjct: 35 QMPARPTIDESEITGSYLKGSGPGGQKINKTSSAVQLIHLPTNTVVKSQATRSRSQNRKI 94 Query: 276 AWNMLRAKLYELE-------------LQKREEIANIGESSK 303 A +L K+ L+ QKR+ K Sbjct: 95 ALQILAEKVELLQKGGQSRAAIVAQTKQKRKASKTKKSKRK 135 >gi|332880579|ref|ZP_08448253.1| ATP-dependent chaperone protein ClpB [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681567|gb|EGJ54490.1| ATP-dependent chaperone protein ClpB [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 866 Score = 37.1 bits (84), Expect = 4.4, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 17/47 (36%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + D +RL L + E + + + L +E L S K Sbjct: 409 ELDEIERRLKQLEIEREAIKRENDQPKLEQLSKEIAELKEQESSYKA 455 >gi|330997711|ref|ZP_08321556.1| ATP-dependent chaperone protein ClpB [Paraprevotella xylaniphila YIT 11841] gi|329570239|gb|EGG51979.1| ATP-dependent chaperone protein ClpB [Paraprevotella xylaniphila YIT 11841] Length = 866 Score = 37.1 bits (84), Expect = 4.4, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 17/47 (36%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 + D +RL L + E + + + L +E L S K Sbjct: 409 ELDEIERRLKQLEIEREAIKRENDQPKLEQLSKEIAELKEQESSYKA 455 >gi|269854050|gb|ACZ51239.1| merozoite surface protein 1 [Plasmodium ovale] Length = 1718 Score = 37.1 bits (84), Expect = 4.6, Method: Composition-based stats. Identities = 11/80 (13%), Positives = 32/80 (40%), Gaps = 2/80 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAK-MLMRERQHLDNAISFIK- 60 L +++ L + ++ ++ +K P + + + + + + + N +K Sbjct: 298 LKKRVQTLKEHKEIKKLLEEIAEKESKVTQPSNTDSQAQLQEEINKLKTQIKNIAKTVKF 357 Query: 61 EIQDRLCDNLILLELALEED 80 E++ D + L E+D Sbjct: 358 EMEGLFTDPVELDYYLREKD 377 >gi|311747695|ref|ZP_07721480.1| ABC transporter, ATP-binding protein [Algoriphagus sp. PR1] gi|126575683|gb|EAZ79993.1| ABC transporter, ATP-binding protein [Algoriphagus sp. PR1] Length = 640 Score = 37.1 bits (84), Expect = 4.6, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 2/74 (2%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL L+ + + Q S L TK DP L+ + EAK + Q L ++ + + Sbjct: 566 KLEESLSKVEAS--IEKLEQSKSQLETKMADPSLYSDDEEAKKAQLKHQELHKQLNEMND 623 Query: 62 IQDRLCDNLILLEL 75 + L D + +++ Sbjct: 624 KWEALVDQISMIQE 637 >gi|297183730|gb|ADI19854.1| protein chain release factor a [uncultured alpha proteobacterium EB000_46D07] Length = 90 Score = 37.1 bits (84), Expect = 4.7, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 33/61 (54%) Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162 Q L + DS +A LEV AG GG E+ +A+ L MY R+A K +K E +E+ + Sbjct: 28 QLLLLPKDKDDSRNAILEVRAGTGGDEAALFASNLFSMYQRFAAKHGWKFEVMEVSETGI 87 Query: 163 A 163 Sbjct: 88 G 88 >gi|239825795|ref|YP_002948419.1| ABC transporter [Geobacillus sp. WCH70] gi|239806088|gb|ACS23153.1| ABC transporter related [Geobacillus sp. WCH70] Length = 644 Score = 37.1 bits (84), Expect = 4.7, Method: Composition-based stats. Identities = 6/39 (15%), Positives = 15/39 (38%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN 54 ++L + + DP L + + L+++ L Sbjct: 94 LKTIEKQLRQMELQMGDPDLIADSSRYEKLLKDYDALQE 132 Score = 36.7 bits (83), Expect = 5.5, Method: Composition-based stats. Identities = 7/50 (14%), Positives = 25/50 (50%), Gaps = 4/50 (8%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFIKEIQDRL 66 Q++++++ + DP ++Q+ + + L +E + L+ + + + Sbjct: 595 QQIAYIDEQLCDPEIYQDHEKVQKLTKESDEMKGKLEKLLEEWETLHTLQ 644 >gi|312868542|ref|ZP_07728740.1| ABC transporter, ATP-binding protein [Lactobacillus oris PB013-T2-3] gi|311095935|gb|EFQ54181.1| ABC transporter, ATP-binding protein [Lactobacillus oris PB013-T2-3] Length = 644 Score = 37.1 bits (84), Expect = 4.7, Method: Composition-based stats. Identities = 8/70 (11%), Positives = 24/70 (34%), Gaps = 3/70 (4%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK- 60 KL R+++ L + + + + P + ++ + L +E L ++ Sbjct: 571 KLQRKVDDLEKQM--AQLEDQQANIEAEMSKPEVATDIGKLTDLQKELDQLKAQSEEVEL 628 Query: 61 EIQDRLCDNL 70 + + Sbjct: 629 DWTAAAEELE 638 >gi|242003858|ref|XP_002422888.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212505770|gb|EEB10150.1| conserved hypothetical protein [Pediculus humanus corporis] Length = 851 Score = 37.1 bits (84), Expect = 4.7, Method: Composition-based stats. Identities = 10/79 (12%), Positives = 25/79 (31%), Gaps = 8/79 (10%) Query: 5 RQLNCLGGLFDW-----DNAVQRLSFLNTKTEDPH-LWQNVIEAKMLMRE--RQHLDNAI 56 ++ L G+ D + + R++ L L + A ++E ++ L+ Sbjct: 688 EEVRNLNGMVDLKVSALEASKNRVNELEALLAKKDALIADQKRALKTVKEECQEQLEAVE 747 Query: 57 SFIKEIQDRLCDNLILLEL 75 + K + Sbjct: 748 TKYKSQIAINRKLEECIFE 766 >gi|213402735|ref|XP_002172140.1| conserved hypothetical protein [Schizosaccharomyces japonicus yFS275] gi|212000187|gb|EEB05847.1| conserved hypothetical protein [Schizosaccharomyces japonicus yFS275] Length = 1331 Score = 37.1 bits (84), Expect = 4.7, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 66/203 (32%), Gaps = 10/203 (4%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPHL-WQNVIEAK----MLMRERQHLDNAISFIKEI 62 + LG + D ++ Q ++ L KTE+ + + E K + L + + E+ Sbjct: 1099 DELGDM-DKNSLKQEIAELKQKTENVEVDVNVLEEYKSRQVEASKRENELKDEVLRRDEL 1157 Query: 63 QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122 + ++ D L L + + + + +I + E + S + S V Sbjct: 1158 KKKIDDLNAL-RLDEFMAGFNAISKKLKEMYQIITMGGNAELELVDSLDPFSEGVVFSVM 1216 Query: 123 AGAGG---TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179 + L +K + + D +A + + I Sbjct: 1217 PPKKSWKNISNLSGGEKTLSSLALVFALHNYKPTPIYVMDEIDAALDFKNVSIVANYIKE 1276 Query: 180 WLKGEQGVHRLVRISPYDSNSRR 202 K Q + +R + ++ SR Sbjct: 1277 RTKNAQFIVISLRSNMFELASRL 1299 >gi|288927538|ref|ZP_06421385.1| DNA gyrase, A subunit [Prevotella sp. oral taxon 317 str. F0108] gi|288330372|gb|EFC68956.1| DNA gyrase, A subunit [Prevotella sp. oral taxon 317 str. F0108] Length = 871 Score = 37.1 bits (84), Expect = 4.8, Method: Composition-based stats. Identities = 15/157 (9%), Positives = 37/157 (23%), Gaps = 9/157 (5%) Query: 6 QLNCLGGLFDWDNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64 +L+ L G + L + + E K +M+ L+ + + Sbjct: 430 RLSQLTG-LRIEQLHAEYQELEELIARLQLILDDPEECKRVMK--AELEEVKEKFGD-ER 485 Query: 65 RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 R E E+ + + + +F G S + Sbjct: 486 RTEIIPDEHEFNAEDFYPNDPVVITVSHLGYIKRTPLSEFHEQARGGVGSKG----ANTR 541 Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161 + + + + +K + Sbjct: 542 DKDFTEYIYPATMHQTMLFFTKKGRCHWLKCYEIPEG 578 >gi|323698136|ref|ZP_08110048.1| ABC transporter related protein [Desulfovibrio sp. ND132] gi|323458068|gb|EGB13933.1| ABC transporter related protein [Desulfovibrio desulfuricans ND132] Length = 657 Score = 37.1 bits (84), Expect = 4.8, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 24/71 (33%), Gaps = 2/71 (2%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62 L ++ + L D + + + L K DP ++ EA L + + E Sbjct: 582 LKKKYDKLEA--DLEKVLDEQAGLEAKMNDPATYEKPEEALRLNAAYKDATEWAETLMER 639 Query: 63 QDRLCDNLILL 73 L + + Sbjct: 640 MAELEGRMEAI 650 >gi|255280969|ref|ZP_05345524.1| ABC transporter, ATP-binding protein [Bryantella formatexigens DSM 14469] gi|255268417|gb|EET61622.1| ABC transporter, ATP-binding protein [Bryantella formatexigens DSM 14469] Length = 647 Score = 37.1 bits (84), Expect = 4.8, Method: Composition-based stats. Identities = 8/51 (15%), Positives = 19/51 (37%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66 QR L+ P ++ + L +E+ + + + E+ + L Sbjct: 596 IQALEQRDGELDELLAQPEVYSDAARCIELNKEKYEISQKLEELYELWETL 646 >gi|325268693|ref|ZP_08135322.1| mobilization protein [Prevotella multiformis DSM 16608] gi|324988937|gb|EGC20891.1| mobilization protein [Prevotella multiformis DSM 16608] Length = 418 Score = 36.7 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 15/111 (13%), Positives = 35/111 (31%), Gaps = 5/111 (4%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---- 56 +++ L L G + D A +R+ L + E +A + +E L + + Sbjct: 242 LQVKGTLYSLFGNTELDKAEKRIEELEREMERQKFLSEKEKA-EIRKEVILLQDTVRGRD 300 Query: 57 SFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107 I E+++ + + + R + + E Sbjct: 301 RTIAELKETMQVYEEERNWIKRFFNGFYQLLNIRLMLRKMNFSDDRIAEMY 351 >gi|166031781|ref|ZP_02234610.1| hypothetical protein DORFOR_01482 [Dorea formicigenerans ATCC 27755] gi|166028234|gb|EDR46991.1| hypothetical protein DORFOR_01482 [Dorea formicigenerans ATCC 27755] Length = 641 Score = 36.7 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 6/50 (12%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKEIQDRLC 67 R + ++T ++ N ++ + L +E +D + ++ ++ Sbjct: 592 LEDRSAEIDTLMSQEEVYTNSVKCQELAKEHAEIDAELETLYEKWEELAE 641 >gi|189462626|ref|ZP_03011411.1| hypothetical protein BACCOP_03318 [Bacteroides coprocola DSM 17136] gi|189430787|gb|EDU99771.1| hypothetical protein BACCOP_03318 [Bacteroides coprocola DSM 17136] Length = 646 Score = 36.7 bits (83), Expect = 4.9, Method: Composition-based stats. Identities = 4/55 (7%), Positives = 20/55 (36%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70 + + ++ L + P ++ + + ++ + +A + + L + Sbjct: 591 IERLEKEVAELEERMATPEGASDMKLYEQHQQLKKQISDAEEEWENVSLELEELK 645 >gi|302688227|ref|XP_003033793.1| hypothetical protein SCHCODRAFT_81664 [Schizophyllum commune H4-8] gi|300107488|gb|EFI98890.1| hypothetical protein SCHCODRAFT_81664 [Schizophyllum commune H4-8] Length = 1017 Score = 36.7 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 38/315 (12%), Positives = 86/315 (27%), Gaps = 17/315 (5%) Query: 12 GLFDWDNA--VQRLSFLNTKTEDPHLWQNV--------------IEAKMLMRERQHLDNA 55 + +W++ RL + WQ K ++ E++ L++ Sbjct: 409 RMLEWESKMERDRLQQREEMLQREEEWQRRRKGKQREMDEEDMTQRYKEVVEEKKALESL 468 Query: 56 ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115 I+ ++ RL D L + L + + + +R + + ++ L GE + Sbjct: 469 ITSLRTHLTRLTDELEQHKEMLAQIRIDNQTKENKWEERWQEVDKLREEVERLGGEVEVL 528 Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE-IHDGEEAGIKSATLLIKG 174 +E S + + + + E + + Sbjct: 529 RGVVEEGLKDRSRHSNGSSRDESVQVSFTQDAQDLSRSQRRPSARPERQRQRQPSGNASQ 588 Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234 + L V + + E + ++ Sbjct: 589 QSRGDDLSMLPQQSIEVSNPDMGMSVDEDDEEEEEDETAPSQRPTVEDSDEEEDQLPFDP 648 Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294 S G +A R +RS N++ R L E+++ E+ Sbjct: 649 VSIPGSSRAQIGTNADRTIRTDRATKSAESSDRSMRANQSGVGETSRPFLDSDEIRQIEQ 708 Query: 295 IANIGESSKTEIGWG 309 SS+++ G Sbjct: 709 EMEERRSSRSQTSVG 723 >gi|203460691|ref|YP_002224425.1| gp204 [Mycobacterium phage Spud] gi|197312272|gb|ACH62628.1| gp204 [Mycobacterium phage Spud] Length = 113 Score = 36.7 bits (83), Expect = 5.0, Method: Composition-based stats. Identities = 27/56 (48%), Positives = 37/56 (66%) Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 DC ++T R G GGQ+ NT D+AVRI H P+G V + Q+ERSQ +NK A+ + Sbjct: 8 DCVVETKRGHGNGGQNRNTRDTAVRIVHPPSGAVGESQEERSQLQNKKTAFRRMAE 63 >gi|204305830|ref|YP_002224647.1| gp203 [Mycobacterium phage Cali] gi|197312803|gb|ACH63156.1| gp203 [Mycobacterium phage Cali] Length = 110 Score = 36.7 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 27/60 (45%), Positives = 40/60 (66%) Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 ++ +DC ++T R G GGQ+ NT D+AVRI H P+G V + Q+ERSQ +NK A+ + Sbjct: 1 MTLADCVVETKRGHGNGGQNRNTRDTAVRIVHPPSGAVGESQEERSQLQNKKTAFRRMAE 60 >gi|29566685|ref|NP_818251.1| gp200 [Mycobacterium phage Bxz1] gi|109393384|ref|YP_656182.1| gp202 [Mycobacterium phage Catera] gi|29425410|gb|AAN16834.1| gp200 [Mycobacterium phage Bxz1] gi|91981206|gb|ABE67921.1| gp202 [Mycobacterium phage Catera] Length = 113 Score = 36.7 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 27/56 (48%), Positives = 37/56 (66%) Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 DC ++T R G GGQ+ NT D+AVRI H P+G V + Q+ERSQ +NK A+ + Sbjct: 8 DCVVETKRGHGNGGQNRNTRDTAVRIVHPPSGAVGESQEERSQLQNKKTAFRRMAE 63 >gi|328768224|gb|EGF78271.1| hypothetical protein BATDEDRAFT_90766 [Batrachochytrium dendrobatidis JAM81] Length = 177 Score = 36.7 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 40/85 (47%) Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252 I P S + + V V + +++ E+D + SG GGQ +N +V++ Sbjct: 36 IPPQTSAATLSIQPTQSQVPKEVKKRLPVQLVETDLVEKFTKGSGPGGQKINKCKHSVQL 95 Query: 253 THIPTGVVVQCQQERSQHKNKAQAW 277 H PTG+ V+ Q+ R N+ +A Sbjct: 96 WHTPTGLFVETQRFRELASNRREAR 120 >gi|242371717|ref|ZP_04817291.1| ABC superfamily ATP binding cassette transporter, ABC protein [Staphylococcus epidermidis M23864:W1] gi|242350577|gb|EES42178.1| ABC superfamily ATP binding cassette transporter, ABC protein [Staphylococcus epidermidis M23864:W1] Length = 643 Score = 36.7 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 10/55 (18%), Positives = 26/55 (47%), Gaps = 4/55 (7%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQH----LDNAISFIKEIQDRL 66 + +S++ + P ++ + I+A L E+ L+ + +E+Q++L Sbjct: 589 IEAFETHISYIEEQLTQPEVFNDPIKAAELAEEKNETEQKLEQVMFEWEELQEKL 643 >gi|150865855|ref|XP_001385239.2| hypothetical protein PICST_60261 [Scheffersomyces stipitis CBS 6054] gi|149387111|gb|ABN67210.2| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 156 Score = 36.7 bits (83), Expect = 5.1, Method: Composition-based stats. Identities = 25/55 (45%), Positives = 36/55 (65%) Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287 G GGQ +N ++S V++TH+PTG+VV CQ RSQ N+ +A +L KL +L Sbjct: 28 KGGRGPGGQKINKSNSKVQLTHLPTGIVVTCQYSRSQESNRKRAREILALKLDDL 82 >gi|295098982|emb|CBK88071.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component [Eubacterium cylindroides T2-87] Length = 328 Score = 36.7 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 34/101 (33%), Gaps = 8/101 (7%) Query: 18 NAVQRLSFLNTK-----TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 + + L +P + EA ++ + ++ + K+ + D L Sbjct: 117 SLESYVEELEALDIPVVLLEPETADDFEEAVEIIGKVMGCEDKVDEYKQYE---EDLLEK 173 Query: 73 LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113 EL E++ ++ SD L ++ + S + Sbjct: 174 YELDEVEEEPTVYFAGSDLLTCATDDMYQGEILSYAQADNA 214 >gi|269792020|ref|YP_003316924.1| ABC transporter-like protein [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099655|gb|ACZ18642.1| ABC transporter related protein [Thermanaerovibrio acidaminovorans DSM 6589] Length = 658 Score = 36.7 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 4/58 (6%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER----QHLDNAISFIKEIQDRLCDN 69 + A R S + + DP + + + LM E L+ + +E+ L Sbjct: 600 IEEAEGRKSQVESMLCDPEVLSDSALVQELMVELSGLSSSLEGLYARWEELAAELDSI 657 >gi|222151965|ref|YP_002561125.1| ABC transporter ATP-binding protein [Macrococcus caseolyticus JCSC5402] gi|222121094|dbj|BAH18429.1| ABC transporter ATP-binding protein [Macrococcus caseolyticus JCSC5402] Length = 639 Score = 36.7 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 30/70 (42%), Gaps = 6/70 (8%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEA----KMLMRERQHLDNAIS 57 KL RQ L + + +R++ + + P ++ ++ +A + L+R + + Sbjct: 571 KLERQKEKLETQIEIN--EERINEIELELTKPEVFSDIEKANTFNEELIRLNNENEKLLE 628 Query: 58 FIKEIQDRLC 67 +I+ L Sbjct: 629 EWSDIEMALE 638 >gi|320353117|ref|YP_004194456.1| ABC transporter-like protein [Desulfobulbus propionicus DSM 2032] gi|320121619|gb|ADW17165.1| ABC transporter related protein [Desulfobulbus propionicus DSM 2032] Length = 611 Score = 36.7 bits (83), Expect = 5.2, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 17/54 (31%), Gaps = 4/54 (7%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL----DNAISFIKEIQDRLC 67 A RL L P + N + E+Q L + E++ R Sbjct: 557 AAEARLGELEALMASPEVMANPAQLHRYWEEQQELQTKTEQLYDRWDELEQRRQ 610 >gi|242021327|ref|XP_002431096.1| Phosphatidylinositol 3-kinase regulatory subunit alpha, putative [Pediculus humanus corporis] gi|212516345|gb|EEB18358.1| Phosphatidylinositol 3-kinase regulatory subunit alpha, putative [Pediculus humanus corporis] Length = 726 Score = 36.7 bits (83), Expect = 5.3, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 41/122 (33%), Gaps = 9/122 (7%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKTEDPH--LWQNVIEAKMLMRERQHLD--NAISFIKEIQ 63 + + + + ++L+ + + +D + + + +E + + E+ Sbjct: 424 DEIASSLNIEKVAKKLAEIEAQLQDKSRTFQKLKEDFNKISKEI-EVKRGPTMDAFIELT 482 Query: 64 DRLCDNLILLELAL----EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 + + L E + S++ + QRIK E ++ + + L Sbjct: 483 NMFKEQQELQERFKKEAQPHEIKSLMVNSELLKQRIKSLEESRELLKENLKQQVAYYKTL 542 Query: 120 EV 121 E Sbjct: 543 ER 544 >gi|301756711|ref|XP_002914207.1| PREDICTED: LOW QUALITY PROTEIN: nesprin-2-like [Ailuropoda melanoleuca] Length = 6901 Score = 36.7 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 5/113 (4%) Query: 16 WDNAVQRLSFLNTKTEDP--HLWQNVIEAKMLMRER-QHLDNAISFIKEIQDRLCDN--L 70 RL L ++ DP L +++ + K LM+E + L N +KE+ D Sbjct: 5811 IKELKSRLQVLKAQSRDPLPELHEDLHKEKELMKELEKSLGNWTKNLKELHTMKTDLTQH 5870 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 IL+E + ++ + +++ V ++ E L+ N+ E+ A Sbjct: 5871 ILVEDVMVLEEQTEHLHRQWEDLCLRVAVRKQEIEDRLNSWIVFNEKNKELCA 5923 >gi|281416112|ref|YP_003347848.1| gp198 [Mycobacterium phage ET08] gi|255927791|gb|ACU41412.1| gp198 [Mycobacterium phage ET08] gi|255928079|gb|ACU41698.1| gp203 [Mycobacterium phage LRRHood] Length = 136 Score = 36.7 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 27/56 (48%), Positives = 37/56 (66%) Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282 DC ++T R G GGQ+ NT D+AVRI H P+G V + Q+ERSQ +NK A+ + Sbjct: 31 DCVVETKRGHGNGGQNRNTRDTAVRIVHPPSGAVGESQEERSQLQNKKTAFRRMAE 86 >gi|117619670|ref|YP_858042.1| ABC transporter, ATP-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561077|gb|ABK38025.1| ABC transporter, ATP-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 636 Score = 36.7 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 9/78 (11%), Positives = 30/78 (38%), Gaps = 5/78 (6%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQN--VIEAKMLMRERQHLDNAISFIK 60 L ++L L + +L+ + + DP +++ + L++ + + + ++ Sbjct: 560 LRQKLEKLETSM--EKLQAKLAAVEEQLADPAIYEESAKQKLSELLKSQGPIKEELEGVE 617 Query: 61 -EIQDRLCDNLILLELAL 77 E + + + L Sbjct: 618 LEWMSLSEELETMEQAFL 635 >gi|73969651|ref|XP_538496.2| PREDICTED: similar to Hook-related protein 1 isoform 1 [Canis familiaris] Length = 2030 Score = 36.7 bits (83), Expect = 5.4, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 50/165 (30%), Gaps = 11/165 (6%) Query: 2 KLSRQLNCLGG----LFDWDNAVQRL----SFLNTKT--EDPHLWQNVIEAKMLMRERQH 51 +L ++ G + + QRL L + E L +K LM+E+ Sbjct: 478 ELRSTMDSAEGNASKILKIEKENQRLSKKVEILENEIIQEKQSLQNCQNLSKDLMKEKAQ 537 Query: 52 LDNAISFIKE-IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L+ I ++E + ++ E + + R+K + + Sbjct: 538 LEKTIETLRENSERQIKILEQENEHLNQTVTSLRQRSQISAEARVKDIEKENKILHESIK 597 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 E S + +E E + + R E + E Sbjct: 598 ETSSKLSKIEFEKRQIRKELEHYKEKGERAEELENELHHLEKENE 642 >gi|66395599|ref|YP_239938.1| ORF011 [Staphylococcus phage 3A] gi|62635945|gb|AAX91056.1| ORF011 [Staphylococcus phage 3A] Length = 387 Score = 36.7 bits (83), Expect = 5.5, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 44/129 (34%), Gaps = 10/129 (7%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + L +G + L+ K DP++ ++ + K L E+ L Sbjct: 6 ELKQSLGMIG-----QQLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 55 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ ++ D + +++ + Y+ E S +A + Sbjct: 56 VERQVKDIEEKEKAKVKDTGEAYQSLNDHEKMVKAKAEFYRHAILPNEFEKPSMEAQRLL 115 Query: 122 HAGAGGTES 130 HA G +S Sbjct: 116 HALPTGNDS 124 >gi|326929619|ref|XP_003210956.1| PREDICTED: probable peptide chain release factor C12orf65, mitochondrial-like [Meleagris gallopavo] Length = 165 Score = 36.7 bits (83), Expect = 5.5, Method: Composition-based stats. Identities = 23/63 (36%), Positives = 39/63 (61%) Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281 +++E++ + R G GGQ N T + V + H+P+G+VV+C Q RS KN+ A +L+ Sbjct: 55 QLTEAELKEQFVRGDGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVEKNRKIAREILQ 114 Query: 282 AKL 284 K+ Sbjct: 115 EKV 117 >gi|254690017|ref|ZP_05153271.1| peptide chain release factor 1 [Brucella abortus bv. 6 str. 870] Length = 35 Score = 36.7 bits (83), Expect = 5.5, Method: Composition-based stats. Identities = 6/24 (25%), Positives = 13/24 (54%) Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355 V++GDLD+ + A ++ + Sbjct: 1 LYKLDRVMEGDLDELVDALISDHQ 24 >gi|15613113|ref|NP_241416.1| ABC transporter ATP-binding protein [Bacillus halodurans C-125] gi|10173163|dbj|BAB04269.1| ABC transporter (ATP-binding protein) [Bacillus halodurans C-125] Length = 642 Score = 36.7 bits (83), Expect = 5.5, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 19/47 (40%), Gaps = 1/47 (2%) Query: 8 NCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53 + + +F+ +RL + + +P L N + L+ E L Sbjct: 85 DEMLSVFEPLQQMERRLRKMEEQMANPALLNNASSYEKLLEEYDSLQ 131 >gi|295100719|emb|CBK98264.1| ATPase components of ABC transporters with duplicated ATPase domains [Faecalibacterium prausnitzii L2-6] Length = 631 Score = 36.7 bits (83), Expect = 5.6, Method: Composition-based stats. Identities = 6/70 (8%), Positives = 20/70 (28%), Gaps = 3/70 (4%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD-NAISFIK 60 +L ++ + + R L + P ++ + + E L + Sbjct: 554 ELRAKIKACED--EMEACGAREVELENEINSPEVYNDPQLLREKSDELSDLRFHQDELFA 611 Query: 61 EIQDRLCDNL 70 + + + Sbjct: 612 AWEAAVEEQE 621 >gi|309380006|emb|CBX21417.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 636 Score = 36.7 bits (83), Expect = 5.7, Method: Composition-based stats. Identities = 5/57 (8%), Positives = 22/57 (38%), Gaps = 4/57 (7%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLC 67 + + +N + DP ++++ +A L + ++ + + ++ + Sbjct: 576 EIAALEAEQAEINAQLSDPEIFKDYEKAGALQNRAEEIETLLLEKLERWERLEAKQN 632 >gi|189184299|ref|YP_001938084.1| ABC transporter ATP-binding protein Uup [Orientia tsutsugamushi str. Ikeda] gi|189181070|dbj|BAG40850.1| ABC transporter ATP-binding protein Uup [Orientia tsutsugamushi str. Ikeda] Length = 601 Score = 36.7 bits (83), Expect = 5.7, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 31/75 (41%), Gaps = 11/75 (14%) Query: 2 KLSRQLN-CLGGLFD-----WDNAVQRLSFLNTKTEDPHLW-QNVIEAKMLMRERQ---- 50 KLS +L+ + D ++ L K DP+L+ N E + +E + Sbjct: 525 KLSTKLSYKFQRMLDSIPEEITQLETQVKDLEKKLADPNLYQNNPDEFLLFSKELETSKL 584 Query: 51 HLDNAISFIKEIQDR 65 ++ ++I++R Sbjct: 585 RIEELFDTWQKIENR 599 >gi|259502711|ref|ZP_05745613.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus antri DSM 16041] gi|259169356|gb|EEW53851.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus antri DSM 16041] Length = 645 Score = 36.7 bits (83), Expect = 5.7, Method: Composition-based stats. Identities = 9/70 (12%), Positives = 23/70 (32%), Gaps = 3/70 (4%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK- 60 KL R+++ L ++ S + + P + ++ L +E L ++ Sbjct: 572 KLQRKVDDLED--QLAQLEEQQSTIEAEMSKPEVATDIGRLTDLQKELDQLKAQSDEVEL 629 Query: 61 EIQDRLCDNL 70 + Sbjct: 630 AWTAAAEELE 639 >gi|303243902|ref|ZP_07330242.1| conserved hypothetical protein [Methanothermococcus okinawensis IH1] gi|302485838|gb|EFL48762.1| conserved hypothetical protein [Methanothermococcus okinawensis IH1] Length = 367 Score = 36.7 bits (83), Expect = 5.8, Method: Composition-based stats. Identities = 8/149 (5%), Positives = 39/149 (26%), Gaps = 28/149 (18%) Query: 5 RQLNCLGGLFDWDNAVQRLSFLNTKT-EDPHLWQNVIEA--------------------K 43 ++ G + + + + + L + + ++ + K Sbjct: 118 SRIEFAGSIKELEKLFKEVRELEAEIKAKEKVVDDLEKVIFYYKALKKITKKRIKKAYRK 177 Query: 44 MLMRE---RQHLDNAISFI----KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK 96 + +E + + + + + + L E + + + Sbjct: 178 AIGKEKTNYKEYNKIVDEYMSARERYEQLKDEINELKNYKNELLESLSFTGEDGGIVWLV 237 Query: 97 LEVEYKQFESLLSGEADSNDAYLEVHAGA 125 ++++ + S ++ +A Sbjct: 238 DRIDWENKKIFFSDVHMFSEIEFLTNANV 266 >gi|24214865|ref|NP_712346.1| peptidyl-tRNA hydrolase [Leptospira interrogans serovar Lai str. 56601] gi|24195884|gb|AAN49364.1| peptidyl-tRNA hydrolase involved in peptide chain release [Leptospira interrogans serovar Lai str. 56601] Length = 155 Score = 36.7 bits (83), Expect = 5.8, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 4/92 (4%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 ++I E++ R+ G GGQ+VN +AV + H PTG+ V+C R+Q N+ +A Sbjct: 19 MEILQIKETELEESFTRSGGKGGQNVNKVSTAVHLRHKPTGIEVKCSLYRTQGLNRYKAR 78 Query: 278 NMLRAKLYELELQKR----EEIANIGESSKTE 305 +L K+ + + E+ + + + + Sbjct: 79 AILCEKIRDFNHKNLGIISEDQKKLIRNKQKD 110 >gi|315656349|ref|ZP_07909238.1| ABC superfamily ATP binding cassette transporter, ABC protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492908|gb|EFU82510.1| ABC superfamily ATP binding cassette transporter, ABC protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 560 Score = 36.7 bits (83), Expect = 5.9, Method: Composition-based stats. Identities = 29/189 (15%), Positives = 50/189 (26%), Gaps = 14/189 (7%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + + R + ++ + DP + LM E L AI + Sbjct: 95 EIKAKLDRYNEISAQMADPD-----ADFDALMEEMGQLQEAIDAADAWDLDSQLEQAMDA 149 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 L D + + +R+ L + LL + +N ES W Sbjct: 150 LRCPPADADVKTLSGGERRRVALCKLLLEAPDLLLLDEPTNHL---------DAESVLWL 200 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L Y L+ G A + L N +L+ +Q + Sbjct: 201 EQHLSQYKGAVIAVTHDRYFLDHVAGWIAEVDRGHLYPYEGNYSTYLEKKQERLEVQGRK 260 Query: 195 PYDSNSRRH 203 R Sbjct: 261 DAKLQKRLK 269 >gi|170725043|ref|YP_001759069.1| ABC transporter-like protein [Shewanella woodyi ATCC 51908] gi|169810390|gb|ACA84974.1| ABC transporter related [Shewanella woodyi ATCC 51908] Length = 657 Score = 36.7 bits (83), Expect = 5.9, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 32/80 (40%), Gaps = 8/80 (10%) Query: 2 KLSRQLNCLGGL-----FDWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLMRERQHLDN 54 +L ++L+ + + D + A RL+ + D L+ +N + ++ ER L Sbjct: 571 ELRQKLSPMRKIQLKLEKDQEKANSRLAEIEEMLGDMALYEAENKDKLTQVLNERTKLTQ 630 Query: 55 AISFIK-EIQDRLCDNLILL 73 A+ + E D + Sbjct: 631 AVEESEMEWLDVQESIEEIE 650 >gi|291458641|ref|ZP_06598031.1| putative ABC transporter, ATP-binding protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291419174|gb|EFE92893.1| putative ABC transporter, ATP-binding protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 579 Score = 36.7 bits (83), Expect = 5.9, Method: Composition-based stats. Identities = 7/59 (11%), Positives = 21/59 (35%), Gaps = 1/59 (1%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI-SFIKEIQDRLCDNLIL 72 + +R L + P + ++ L RE++ + + ++ + + L Sbjct: 520 EIQKLEERSGELTEQMALPEIASDIGRLMELHREKEAAEERLSELYEDWERFSEELERL 578 >gi|288802170|ref|ZP_06407610.1| DNA gyrase, A subunit [Prevotella melaninogenica D18] gi|288335137|gb|EFC73572.1| DNA gyrase, A subunit [Prevotella melaninogenica D18] Length = 847 Score = 36.7 bits (83), Expect = 5.9, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 18/55 (32%), Gaps = 4/55 (7%) Query: 6 QLNCLGGLFDWDNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFI 59 +L+ L G D Q L +D + N K +M+E L Sbjct: 418 RLSQLTG-LRLDQLHQEFEELMQTIKDLQEILNNPERCKEVMKE--ELQEVKEKY 469 >gi|323439019|gb|EGA96752.1| phiSLT ORF387-like protein, putative phage capsid protein [Staphylococcus aureus O11] Length = 402 Score = 36.7 bits (83), Expect = 6.0, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 44/129 (34%), Gaps = 10/129 (7%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + L +G + L+ K DP++ ++ + K L E+ L Sbjct: 21 ELKQSLGMIG-----QQLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ ++ D + +++ + Y+ E S +A + Sbjct: 71 VERQVKDIEEKEKAKVKDTGEAYQSLNDHEKMVKAKAEFYRHAILPNEFEKPSMEAQRLL 130 Query: 122 HAGAGGTES 130 HA G +S Sbjct: 131 HALPTGNDS 139 >gi|262052893|ref|ZP_06025076.1| prophage L54a, major capsid protein, putative [Staphylococcus aureus 930918-3] gi|259159200|gb|EEW44261.1| prophage L54a, major capsid protein, putative [Staphylococcus aureus 930918-3] gi|283469603|emb|CAQ48814.1| phage major capsid protein, HK97 [Staphylococcus aureus subsp. aureus ST398] gi|283470728|emb|CAQ49939.1| phage major capsid protein, HK97 [Staphylococcus aureus subsp. aureus ST398] Length = 387 Score = 36.7 bits (83), Expect = 6.0, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 44/129 (34%), Gaps = 10/129 (7%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + L +G + L+ K DP++ ++ + K L E+ L Sbjct: 6 ELKQSLGMIG-----QQLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 55 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ ++ D + +++ + Y+ E S +A + Sbjct: 56 VERQVQDIEEKEKAKVKDTGEAYQSLNDHEKMVKAKAEFYRHAILPNEFEKPSMEAQRLL 115 Query: 122 HAGAGGTES 130 HA G +S Sbjct: 116 HALPTGNDS 124 >gi|189183342|ref|YP_001937127.1| peptide chain release factor RF-2 [Orientia tsutsugamushi str. Ikeda] gi|189180113|dbj|BAG39893.1| peptide chain release factor RF-2 [Orientia tsutsugamushi str. Ikeda] Length = 86 Score = 36.7 bits (83), Expect = 6.0, Method: Composition-based stats. Identities = 23/50 (46%), Positives = 34/50 (68%) Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291 +N D AV+ITHIPT ++ +C+ +S +KNK +A L+ LYE EL+K Sbjct: 17 DINPVDYAVKITHIPTSIITECRSYKSHYKNKIEAILSLKKTLYERELKK 66 >gi|315655737|ref|ZP_07908635.1| ABC superfamily ATP binding cassette transporter, ABC protein [Mobiluncus curtisii ATCC 51333] gi|315489801|gb|EFU79428.1| ABC superfamily ATP binding cassette transporter, ABC protein [Mobiluncus curtisii ATCC 51333] Length = 560 Score = 36.7 bits (83), Expect = 6.1, Method: Composition-based stats. Identities = 29/189 (15%), Positives = 50/189 (26%), Gaps = 14/189 (7%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + + R + ++ + DP + LM E L AI + Sbjct: 95 EIKAKLDRYNEISAQMADPD-----ADFDALMEEMGQLQEAIDAADAWDLDSQLEQAMDA 149 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 L D + + +R+ L + LL + +N ES W Sbjct: 150 LRCPPADADVKTLSGGERRRVALCKLLLEAPDLLLLDEPTNHL---------DAESVLWL 200 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L Y L+ G A + L N +L+ +Q + Sbjct: 201 EQHLSQYKGAVIAVTHDRYFLDHVAGWIAEVDRGHLYPYEGNYSTYLEKKQERLEVQGRK 260 Query: 195 PYDSNSRRH 203 R Sbjct: 261 DAKLQKRLK 269 >gi|270307641|ref|YP_003329699.1| ABC transporter, ATP-binding protein [Dehalococcoides sp. VS] gi|270153533|gb|ACZ61371.1| ABC transporter, ATP-binding protein [Dehalococcoides sp. VS] Length = 663 Score = 36.7 bits (83), Expect = 6.2, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 23/61 (37%), Gaps = 1/61 (1%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN-AISFIKEIQDRLCDNLILL 73 + N QR L T DP L+++ +A E ++ ++ + N L Sbjct: 592 EITNLEQRKQELETLLADPDLYRSGQKAADTSAEYKNCKEQLVTLGDKWLKLCQQNDALK 651 Query: 74 E 74 + Sbjct: 652 Q 652 >gi|167646499|ref|YP_001684162.1| ABC transporter-like protein [Caulobacter sp. K31] gi|167348929|gb|ABZ71664.1| ABC transporter related [Caulobacter sp. K31] Length = 627 Score = 36.7 bits (83), Expect = 6.2, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 24/59 (40%), Gaps = 2/59 (3%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 L R++ + ++L+ L + DP L++N + L + R + + + Sbjct: 557 LKRKIEAAEQV--VTRTTRQLAELEAQLADPQLYKNPAKVAELTKRRDNAKAKLDEAEA 613 >gi|87120298|ref|ZP_01076193.1| ABC transporter, ATP-binding protein [Marinomonas sp. MED121] gi|86164401|gb|EAQ65671.1| ABC transporter, ATP-binding protein [Marinomonas sp. MED121] Length = 640 Score = 36.7 bits (83), Expect = 6.2, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 11/80 (13%) Query: 2 KLSRQLNCLGGLFDWDNA-----VQRLSFLNTKTEDPHLWQ--NVIEAKMLM----RERQ 50 +L +QL L L + ++L ++ K D L+ N + + L+ + ++ Sbjct: 557 ELRQQLRPLRKLVEKHEKAVHKAQEKLDEISEKMADADLYDVTNKDKLQALLTDEAKWKK 616 Query: 51 HLDNAISFIKEIQDRLCDNL 70 LD E Q+ L + Sbjct: 617 ELDENEEAWFEAQESLEEAE 636 >gi|325124408|gb|ADY83931.1| transport protein (ABC superfamily, atp_bind) [Acinetobacter calcoaceticus PHEA-2] Length = 636 Score = 36.3 bits (82), Expect = 6.3, Method: Composition-based stats. Identities = 7/55 (12%), Positives = 17/55 (30%), Gaps = 5/55 (9%) Query: 15 DWDNAVQRLSFLNTKTEDPH-LWQNVIEAKMLMRERQHLDNA----ISFIKEIQD 64 + + + L+ K D N EA + ++ + E++ Sbjct: 577 EIEKLEVEQAELSDKLADGSWFVSNADEATKASQRLAEIEEVLLEKLERWDELEQ 631 >gi|154420334|ref|XP_001583182.1| hypothetical protein [Trichomonas vaginalis G3] gi|121917422|gb|EAY22196.1| hypothetical protein TVAG_093700 [Trichomonas vaginalis G3] Length = 3556 Score = 36.3 bits (82), Expect = 6.3, Method: Composition-based stats. Identities = 15/157 (9%), Positives = 49/157 (31%), Gaps = 11/157 (7%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQ--HLDNAISFI 59 +L ++ L + + + + + + ++ E + L A+ Sbjct: 517 ELRKKFKELADALNKKHVK---DEIEAAKHKEEV---RKKWEEVLSELKKQELQKALDKH 570 Query: 60 KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119 EIQ + D +DD ++ ++ ++ + + Sbjct: 571 NEIQKKWEDLSKAQLKKQRQDDMQKEKQKLEDGKKWQELARNYMKMARTYVLKAGRKYID 630 Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 + A +S+ + ++R + + R + ++ Sbjct: 631 DSRAK---LKSRKLSRAVVREWNALTQSRDYVRDSYN 664 >gi|258427136|ref|ZP_05688058.1| bacteriophage capsid protein [Staphylococcus aureus A9299] gi|257849914|gb|EEV73873.1| bacteriophage capsid protein [Staphylococcus aureus A9299] Length = 402 Score = 36.3 bits (82), Expect = 6.4, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 44/129 (34%), Gaps = 10/129 (7%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + L +G + L+ K DP++ ++ + K L E+ L Sbjct: 21 ELKQSLGMIG-----QQLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ ++ D + +++ + Y+ E S +A + Sbjct: 71 VERQVQDIEEKEKAKVKDTGEAYQSLNDHEKMVKAKAEFYRHAILPNEFEKPSMEAQRLL 130 Query: 122 HAGAGGTES 130 HA G +S Sbjct: 131 HALPTGNDS 139 >gi|225561854|gb|EEH10134.1| RNA polymerase Rpb1 C-terminal repeat domain-containing protein [Ajellomyces capsulatus G186AR] Length = 1389 Score = 36.3 bits (82), Expect = 6.4, Method: Composition-based stats. Identities = 21/156 (13%), Positives = 42/156 (26%), Gaps = 17/156 (10%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL-DNAISFIK 60 KL ++N L F+ ++ + D A+ E L ++ I Sbjct: 570 KLKGRINELR--FELGGLQEKQKDVEESLAD---------AQKENDELSQLREDLQEEID 618 Query: 61 EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 +Q + + E LE +E + + F+ + + + L+ Sbjct: 619 NLQRAIQEEKEAHEQELER-----QREKEKEALDNQKQDLEGYFQEIKNEDDRLAAEQLQ 673 Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156 E L E + E Sbjct: 674 AREQELTDERDKLKAELEAEMRELTEAKDAMATDYE 709 >gi|213966249|ref|ZP_03394433.1| DNA gyrase, A subunit [Corynebacterium amycolatum SK46] gi|213951101|gb|EEB62499.1| DNA gyrase, A subunit [Corynebacterium amycolatum SK46] Length = 867 Score = 36.3 bits (82), Expect = 6.4, Method: Composition-based stats. Identities = 9/60 (15%), Positives = 21/60 (35%), Gaps = 8/60 (13%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFI 59 M+L +L L + L+ + + D + N + +++E L + Sbjct: 443 MQLR-RLAALER----QKIIDELAEIELEIADLKDILANPDRQRAIVKE--ELGEVVEKY 495 >gi|150007908|ref|YP_001302651.1| putative ABC transporter ATP-binding protein [Parabacteroides distasonis ATCC 8503] gi|255013404|ref|ZP_05285530.1| putative ABC transporter ATP-binding protein [Bacteroides sp. 2_1_7] gi|256840153|ref|ZP_05545662.1| ABC transporter ATP-binding protein [Parabacteroides sp. D13] gi|262381528|ref|ZP_06074666.1| ABC transporter ATP-binding protein [Bacteroides sp. 2_1_33B] gi|298376745|ref|ZP_06986700.1| ABC transporter, ATP-binding protein [Bacteroides sp. 3_1_19] gi|301310049|ref|ZP_07215988.1| ABC transporter, ATP-binding protein [Bacteroides sp. 20_3] gi|149936332|gb|ABR43029.1| ABC transporter ATP-binding protein [Parabacteroides distasonis ATCC 8503] gi|256739083|gb|EEU52408.1| ABC transporter ATP-binding protein [Parabacteroides sp. D13] gi|262296705|gb|EEY84635.1| ABC transporter ATP-binding protein [Bacteroides sp. 2_1_33B] gi|298266623|gb|EFI08281.1| ABC transporter, ATP-binding protein [Bacteroides sp. 3_1_19] gi|300831623|gb|EFK62254.1| ABC transporter, ATP-binding protein [Bacteroides sp. 20_3] Length = 562 Score = 36.3 bits (82), Expect = 6.4, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 33/100 (33%) Query: 21 QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80 + +N + DP + ++ + L+ + L + I + L + Sbjct: 105 KEYEEVNERFGDPEVLEDPDKMDALINRQAELQDKIDATDAWNLDSRLERAMDALRCPPE 164 Query: 81 DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 D + + +R+ L Q +L + +N E Sbjct: 165 DQVVDTLSGGERRRVALCRLLLQQPDVLLLDEPTNHLDAE 204 >gi|299143299|ref|ZP_07036379.1| ABC transporter, ATP-binding protein [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517784|gb|EFI41523.1| ABC transporter, ATP-binding protein [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 628 Score = 36.3 bits (82), Expect = 6.4, Method: Composition-based stats. Identities = 7/51 (13%), Positives = 22/51 (43%), Gaps = 4/51 (7%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQ----HLDNAISFIKEIQD 64 ++ ++ + P ++ N+ + + L + R L+N E+++ Sbjct: 578 KIESEINEIDIELSVPEIYNNIEKVQKLSQTRNVKNEELENLYEAWFEMEN 628 >gi|229825501|ref|ZP_04451570.1| hypothetical protein GCWU000182_00861 [Abiotrophia defectiva ATCC 49176] gi|229790064|gb|EEP26178.1| hypothetical protein GCWU000182_00861 [Abiotrophia defectiva ATCC 49176] Length = 637 Score = 36.3 bits (82), Expect = 6.4, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 27/66 (40%), Gaps = 5/66 (7%) Query: 2 KLSRQLNCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQ----HLDNAI 56 +L + N L + D + L K +P + +V + L +++ +++ + Sbjct: 568 ELRKIGNELKKIEDEVAKLESENTELEEKLAEPSIASDVGKLMELHKQKTANDERIESLL 627 Query: 57 SFIKEI 62 +E+ Sbjct: 628 ERWEEL 633 >gi|229552962|ref|ZP_04441687.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus rhamnosus LMS2-1] gi|229313651|gb|EEN79624.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus rhamnosus LMS2-1] Length = 656 Score = 36.3 bits (82), Expect = 6.4, Method: Composition-based stats. Identities = 7/38 (18%), Positives = 13/38 (34%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53 +++ L K DP L + M++ L Sbjct: 100 LQAMARQIHDLEAKLGDPKLIADQAAFAATMKQYDQLQ 137 >gi|293610229|ref|ZP_06692530.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827461|gb|EFF85825.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 640 Score = 36.3 bits (82), Expect = 6.5, Method: Composition-based stats. Identities = 7/55 (12%), Positives = 17/55 (30%), Gaps = 5/55 (9%) Query: 15 DWDNAVQRLSFLNTKTEDPH-LWQNVIEAKMLMRERQHLDNA----ISFIKEIQD 64 + + + L+ K D N EA + ++ + E++ Sbjct: 581 EIEKLEVEQAELSDKLADGSWFVSNADEATKASQRLAEIEEVLLEKLERWDELEQ 635 >gi|317485616|ref|ZP_07944492.1| ABC transporter [Bilophila wadsworthia 3_1_6] gi|316923153|gb|EFV44363.1| ABC transporter [Bilophila wadsworthia 3_1_6] Length = 671 Score = 36.3 bits (82), Expect = 6.6, Method: Composition-based stats. Identities = 5/39 (12%), Positives = 15/39 (38%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN 54 + + S + DP ++ + + L+++ L Sbjct: 598 LEALLTEQSDVEAALADPEVYADGNKTTELLKKFSQLKE 636 >gi|218887467|ref|YP_002436788.1| ABC transporter [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758421|gb|ACL09320.1| ABC transporter related [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 660 Score = 36.3 bits (82), Expect = 6.6, Method: Composition-based stats. Identities = 6/60 (10%), Positives = 22/60 (36%), Gaps = 4/60 (6%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL----DNAISFIKEIQDRLCDNLI 71 + ++ + + DP ++ + + L++ L + + E++ + D Sbjct: 591 LETSLAEQAEVEQTLADPAVYADSVRTTELLKRFGELQRQGEELFEKMSELEAVIADLET 650 >gi|282921758|ref|ZP_06329475.1| phage major capsid protein [Staphylococcus aureus A9765] gi|282594020|gb|EFB99009.1| phage major capsid protein [Staphylococcus aureus A9765] Length = 402 Score = 36.3 bits (82), Expect = 6.6, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 44/129 (34%), Gaps = 10/129 (7%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + L +G + L+ K DP++ ++ + K L E+ L Sbjct: 21 ELKQSLGMIG-----QQLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ ++ D + +++ + Y+ E S +A + Sbjct: 71 VERQVQDIEEKEKAKVKDTGEAYQSLNDHEKMVKAKAEFYRHAILPNEFEKPSMEAQRLL 130 Query: 122 HAGAGGTES 130 HA G +S Sbjct: 131 HALPTGNDS 139 >gi|295402744|ref|ZP_06812684.1| ABC transporter related protein [Geobacillus thermoglucosidasius C56-YS93] gi|312112513|ref|YP_003990829.1| ABC transporter [Geobacillus sp. Y4.1MC1] gi|294975208|gb|EFG50846.1| ABC transporter related protein [Geobacillus thermoglucosidasius C56-YS93] gi|311217614|gb|ADP76218.1| ABC transporter related protein [Geobacillus sp. Y4.1MC1] Length = 644 Score = 36.3 bits (82), Expect = 6.6, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 14/39 (35%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN 54 +L + + DP L + K L+++ L Sbjct: 94 LKEMETQLREMELQMGDPDLLADSSRYKKLLKDYDTLQE 132 >gi|170578563|ref|XP_001894460.1| peptide chain release factor 2, programmed [Brugia malayi] gi|170584020|ref|XP_001896825.1| peptide chain release factor 2, programmed [Brugia malayi] gi|158595842|gb|EDP34329.1| peptide chain release factor 2, programmed, putative [Brugia malayi] gi|158598945|gb|EDP36701.1| peptide chain release factor 2, programmed, putative [Brugia malayi] Length = 93 Score = 36.3 bits (82), Expect = 6.7, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 4/94 (4%) Query: 39 VIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLE 98 +++E + N I +++ D + L++ ++E+D E + L + + Sbjct: 4 QPRGTRILKEYSKIKNDIESFSKLESDYNDAISLMKSTIDENDEEFFSEIENELLKSEKL 63 Query: 99 VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132 V+ K+ L + AD E+H+G GGTES D Sbjct: 64 VKRKETNFLFTDGAD----NTEIHSGVGGTESDD 93 >gi|258540427|ref|YP_003174926.1| ABC transporter ATPase [Lactobacillus rhamnosus Lc 705] gi|257152103|emb|CAR91075.1| ABC transporter, ATPase component [Lactobacillus rhamnosus Lc 705] Length = 650 Score = 36.3 bits (82), Expect = 6.7, Method: Composition-based stats. Identities = 7/38 (18%), Positives = 13/38 (34%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53 +++ L K DP L + M++ L Sbjct: 94 LQAMARQIHDLEAKLGDPKLIADQAAFAATMKQYDQLQ 131 >gi|126640122|ref|YP_001083106.1| putative transport protein [Acinetobacter baumannii ATCC 17978] Length = 622 Score = 36.3 bits (82), Expect = 6.7, Method: Composition-based stats. Identities = 9/59 (15%), Positives = 20/59 (33%), Gaps = 4/59 (6%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLMRERQHLDNAISFI 59 + + + + + RL+ + DP L+ + LM E+ L + Sbjct: 546 IRKNIEKVES--QIEKLQPRLAQIEEALADPSLYEANRKEDLLKLMNEQTELKAKLEQY 602 >gi|325104509|ref|YP_004274163.1| ABC transporter related protein [Pedobacter saltans DSM 12145] gi|324973357|gb|ADY52341.1| ABC transporter related protein [Pedobacter saltans DSM 12145] Length = 559 Score = 36.3 bits (82), Expect = 6.8, Method: Composition-based stats. Identities = 7/49 (14%), Positives = 20/49 (40%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + + ++ +N K P ++++ LM + L + I + + Sbjct: 98 EIVDILKEYEEINEKFGLPEVYEDADAMDKLMTRQGELQDKIDAVNAWE 146 >gi|199599044|ref|ZP_03212451.1| ATPase component of ABC transporter with duplicated ATPase domains [Lactobacillus rhamnosus HN001] gi|199590080|gb|EDY98179.1| ATPase component of ABC transporter with duplicated ATPase domains [Lactobacillus rhamnosus HN001] Length = 650 Score = 36.3 bits (82), Expect = 6.8, Method: Composition-based stats. Identities = 7/38 (18%), Positives = 13/38 (34%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53 +++ L K DP L + M++ L Sbjct: 94 LQAMARQIHDLEAKLGDPKLIADQAAFAATMKQYDQLQ 131 >gi|258445569|ref|ZP_05693751.1| bacteriophage capsid protein [Staphylococcus aureus A6300] gi|257855616|gb|EEV78549.1| bacteriophage capsid protein [Staphylococcus aureus A6300] Length = 402 Score = 36.3 bits (82), Expect = 6.9, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 44/129 (34%), Gaps = 10/129 (7%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + L +G + L+ K DP++ ++ + K L E+ L Sbjct: 21 ELKQSLGMIG-----QQLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ ++ D + +++ + Y+ E S +A + Sbjct: 71 VERQVQDIEEKEKAKVKDTGEAYQSLNDHEKMVKAKAEFYRHAILPNEFEKPSMEAQRLL 130 Query: 122 HAGAGGTES 130 HA G +S Sbjct: 131 HALPTGNDS 139 >gi|193075927|gb|ABO10504.2| putative transport protein [Acinetobacter baumannii ATCC 17978] Length = 643 Score = 36.3 bits (82), Expect = 6.9, Method: Composition-based stats. Identities = 9/59 (15%), Positives = 20/59 (33%), Gaps = 4/59 (6%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLMRERQHLDNAISFI 59 + + + + + RL+ + DP L+ + LM E+ L + Sbjct: 567 IRKNIEKVES--QIEKLQPRLAQIEEALADPSLYEANRKEDLLKLMNEQTELKAKLEQY 623 >gi|258509243|ref|YP_003171994.1| ABC transporter ATP-binding protein [Lactobacillus rhamnosus GG] gi|257149170|emb|CAR88143.1| ABC transporter, ATP-binding protein [Lactobacillus rhamnosus GG] gi|259650525|dbj|BAI42687.1| ABC transporter ATP-binding component [Lactobacillus rhamnosus GG] Length = 650 Score = 36.3 bits (82), Expect = 7.0, Method: Composition-based stats. Identities = 7/38 (18%), Positives = 13/38 (34%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53 +++ L K DP L + M++ L Sbjct: 94 LQAMARQIHDLEAKLGDPKLIADQAAFAATMKQYDQLQ 131 >gi|329955552|ref|ZP_08296460.1| ATP-dependent chaperone protein ClpB [Bacteroides clarus YIT 12056] gi|328525955|gb|EGF52979.1| ATP-dependent chaperone protein ClpB [Bacteroides clarus YIT 12056] Length = 864 Score = 36.3 bits (82), Expect = 7.1, Method: Composition-based stats. Identities = 14/133 (10%), Positives = 37/133 (27%), Gaps = 12/133 (9%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK-----------EIQ 63 + D +++ L + E + + + + +E L K +IQ Sbjct: 409 ELDEISRKIKQLEIEREAIKRENDQPKLEQIGKELAELKEQEKSYKAKWQSEKTLVNKIQ 468 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + L A + + ++ KL+ ++ E + + Sbjct: 469 QNKVEIENLKFEADKAEREGDYG-KVAEIRYGKLQALNQEIEETQQKLHEMQGDKAMIKE 527 Query: 124 GAGGTESQDWANM 136 + D + Sbjct: 528 EVDAEDIADVVSR 540 >gi|332828901|gb|EGK01584.1| hypothetical protein HMPREF9455_02116 [Dysgonomonas gadei ATCC BAA-286] Length = 647 Score = 36.3 bits (82), Expect = 7.2, Method: Composition-based stats. Identities = 8/68 (11%), Positives = 26/68 (38%), Gaps = 2/68 (2%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 ++ +Q++ L L + ++ + K P + + + + L + + +E Sbjct: 579 RVEKQISELEQL--IEKKESHIAEIEVKLTSPEGAADASLFEKHGQLTKELQDDMKHWEE 636 Query: 62 IQDRLCDN 69 + L + Sbjct: 637 LTVELENM 644 >gi|31874236|emb|CAD98013.1| hypothetical protein [Homo sapiens] Length = 1287 Score = 36.3 bits (82), Expect = 7.2, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 46/113 (40%), Gaps = 5/113 (4%) Query: 16 WDNAVQRLSFLNTKTED--PHLWQNVIEAKMLMRER-QHLDNAISFIKEIQDRLCDN--L 70 RL L ++ED P L +++ K L++E Q L + +KE+Q D Sbjct: 207 IKELKSRLQVLKAQSEDPLPELHEDLHNEKELIKELEQSLASWTQNLKELQTMKADLTRH 266 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 +L+E + + +++ + ++ E L+ N+ E+ A Sbjct: 267 VLVEDVMVLKEQIEHLHRQWEDLCLRVAIRKQEIEDRLNTWVVFNEKNKELCA 319 >gi|238925289|ref|YP_002938806.1| ABC transporter, ATP-binding protein [Eubacterium rectale ATCC 33656] gi|238876965|gb|ACR76672.1| ABC transporter, ATP-binding protein [Eubacterium rectale ATCC 33656] Length = 682 Score = 36.3 bits (82), Expect = 7.2, Method: Composition-based stats. Identities = 10/72 (13%), Positives = 23/72 (31%), Gaps = 6/72 (8%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI----S 57 K+ +++ D +L L + P + + + E L+ I Sbjct: 612 KIQKKVKKAEE--DLAVKEAKLDELKAELMKPEYQSSYSKLTEIQNEIDSLEEEILIDME 669 Query: 58 FIKEIQDRLCDN 69 +E+ +L Sbjct: 670 AWEELSSQLEAL 681 >gi|146421313|ref|XP_001486606.1| hypothetical protein PGUG_02277 [Meyerozyma guilliermondii ATCC 6260] Length = 171 Score = 36.3 bits (82), Expect = 7.2, Method: Composition-based stats. Identities = 27/56 (48%), Positives = 37/56 (66%) Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 G GGQ +N ++S V++THIPTG VV CQ RSQ +N+ +A +L KL EL+ Sbjct: 48 KGGRGPGGQKINKSNSKVQLTHIPTGTVVTCQYSRSQEQNRKKAREILALKLEELQ 103 >gi|313884055|ref|ZP_07817821.1| putative lipoprotein [Eremococcus coleocola ACS-139-V-Col8] gi|312620502|gb|EFR31925.1| putative lipoprotein [Eremococcus coleocola ACS-139-V-Col8] Length = 310 Score = 36.3 bits (82), Expect = 7.3, Method: Composition-based stats. Identities = 9/53 (16%), Positives = 20/53 (37%), Gaps = 2/53 (3%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68 + RL + +D + + L E+ L++ I ++ QD + Sbjct: 149 LEELNNRLKEVEEDLKDEDITLEQK--QALRAEKNSLEDQIKALENQQDSTNE 199 >gi|119601245|gb|EAW80839.1| spectrin repeat containing, nuclear envelope 2, isoform CRA_b [Homo sapiens] Length = 1268 Score = 36.3 bits (82), Expect = 7.3, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 46/113 (40%), Gaps = 5/113 (4%) Query: 16 WDNAVQRLSFLNTKTED--PHLWQNVIEAKMLMRER-QHLDNAISFIKEIQDRLCDN--L 70 RL L ++ED P L +++ K L++E Q L + +KE+Q D Sbjct: 184 IKELKSRLQVLKAQSEDPLPELHEDLHNEKELIKELEQSLASWTQNLKELQTMKADLTRH 243 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 +L+E + + +++ + ++ E L+ N+ E+ A Sbjct: 244 VLVEDVMVLKEQIEHLHRQWEDLCLRVAIRKQEIEDRLNTWVVFNEKNKELCA 296 >gi|303252551|ref|ZP_07338714.1| putative ABC transporter ATP-binding protein YheS [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247301|ref|ZP_07529349.1| Uncharacterized ABC transporter ATP-binding protein [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302648519|gb|EFL78712.1| putative ABC transporter ATP-binding protein YheS [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306856145|gb|EFM88300.1| Uncharacterized ABC transporter ATP-binding protein [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 638 Score = 36.3 bits (82), Expect = 7.4, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 7/75 (9%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAK---MLMRERQHLDNAISFI 59 L +++ L D + A ++L+ L +++ +A+ L ++ + A+ I Sbjct: 566 LRKKITQLEK--DLEKASEKLNQLEALLASSEIYEAENKAQLTETLAKQIEE-KKAVEEI 622 Query: 60 K-EIQDRLCDNLILL 73 + E D LL Sbjct: 623 EMEWLDCQEQLEALL 637 >gi|190346160|gb|EDK38179.2| hypothetical protein PGUG_02277 [Meyerozyma guilliermondii ATCC 6260] Length = 171 Score = 36.3 bits (82), Expect = 7.4, Method: Composition-based stats. Identities = 27/56 (48%), Positives = 37/56 (66%) Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288 G GGQ +N ++S V++THIPTG VV CQ RSQ +N+ +A +L KL EL+ Sbjct: 48 KGGRGPGGQKINKSNSKVQLTHIPTGTVVTCQYSRSQEQNRKKAREILALKLEELQ 103 >gi|114653468|ref|XP_001169926.1| PREDICTED: spectrin repeat containing, nuclear envelope 2 isoform 2 [Pan troglodytes] Length = 2776 Score = 36.3 bits (82), Expect = 7.4, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 46/113 (40%), Gaps = 5/113 (4%) Query: 16 WDNAVQRLSFLNTKTED--PHLWQNVIEAKMLMRER-QHLDNAISFIKEIQDRLCDN--L 70 RL L ++ED P L +++ K L++E Q L + +KE+Q D Sbjct: 1711 IKELKSRLQVLKAQSEDPLPELHEDLHNEKELIKELEQSLASWTQNLKELQTMKADLTRH 1770 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 +L+E + + +++ + ++ E L+ N+ E+ A Sbjct: 1771 VLVEDVMVLKEQIEHLHRQWEDLCLRVAIRKQEIEDRLNTWVVFNEKNKELCA 1823 >gi|165975766|ref|YP_001651359.1| ABC transporter ATP-binding protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165875867|gb|ABY68915.1| probable ABC transporter ATP-binding protein [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 638 Score = 36.3 bits (82), Expect = 7.4, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 7/75 (9%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAK---MLMRERQHLDNAISFI 59 L +++ L D + A ++L+ L +++ +A+ L ++ + A+ I Sbjct: 566 LRKKITQLEK--DLEKASEKLNQLEALLASSEIYEAENKAQLTETLAKQIEE-KKAVEEI 622 Query: 60 K-EIQDRLCDNLILL 73 + E D LL Sbjct: 623 EMEWLDCQEQLEALL 637 >gi|329922623|ref|ZP_08278175.1| ABC transporter, ATP-binding protein [Paenibacillus sp. HGF5] gi|328941965|gb|EGG38248.1| ABC transporter, ATP-binding protein [Paenibacillus sp. HGF5] Length = 653 Score = 36.3 bits (82), Expect = 7.5, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 14/47 (29%) Query: 12 GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58 GL ++ L + DP + N ++R L Sbjct: 90 GLIHLKEYRAEMTELEKRMSDPGIAGNSELLDRVLRRYSALQERFET 136 >gi|261392625|emb|CAX50189.1| putative ABC transporter ATP-binding protein [Neisseria meningitidis 8013] gi|325204096|gb|ADY99549.1| ABC transporter, ATP-binding protein Uup [Neisseria meningitidis M01-240355] Length = 636 Score = 36.3 bits (82), Expect = 7.5, Method: Composition-based stats. Identities = 5/57 (8%), Positives = 22/57 (38%), Gaps = 4/57 (7%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLC 67 + + +N + DP ++++ +A L + ++ + + ++ + Sbjct: 576 EIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLETKQN 632 >gi|12719433|ref|NP_075504.1| hypothetical protein phiSLTp42 [Staphylococcus phage phiSLT] gi|21283127|ref|NP_646215.1| hypothetical protein MW1398 [Staphylococcus aureus subsp. aureus MW2] gi|49483693|ref|YP_040917.1| hypothetical protein SAR1516 [Staphylococcus aureus subsp. aureus MRSA252] gi|49485841|ref|YP_043062.1| hypothetical protein SAS0935 [Staphylococcus aureus subsp. aureus MSSA476] gi|57651297|ref|YP_185262.1| prophage L54a, major capsid protein, putative [Staphylococcus aureus subsp. aureus COL] gi|66395517|ref|YP_239859.1| ORF009 [Staphylococcus phage 42E] gi|66395666|ref|YP_240005.1| ORF010 [Staphylococcus phage 47] gi|87161729|ref|YP_494098.1| phiSLT ORF387-like protein, putative phage capsid protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195248|ref|YP_500051.1| hypothetical protein SAOUHSC_01535 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|215401149|ref|YP_002332404.1| major head protein [Staphylococcus phage phiSauS-IPLA35] gi|253315474|ref|ZP_04838687.1| phiSLT ORF387-like protein, putative phage capsid protein [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|284024508|ref|ZP_06378906.1| phiSLT ORF387-like protein, putative phage capsid protein [Staphylococcus aureus subsp. aureus 132] gi|295428017|ref|ZP_06820649.1| hypothetical protein SIAG_00543 [Staphylococcus aureus subsp. aureus EMRSA16] gi|296276331|ref|ZP_06858838.1| phiSLT ORF387-like protein, putative phage capsid protein [Staphylococcus aureus subsp. aureus MR1] gi|12697863|dbj|BAB21735.1| unnamed protein product [Staphylococcus phage phiSLT] gi|21204567|dbj|BAB95263.1| hypothetical protein [Staphylococcus aureus subsp. aureus MW2] gi|49241822|emb|CAG40514.1| hypothetical phage protein [Staphylococcus aureus subsp. aureus MRSA252] gi|49244284|emb|CAG42711.1| hypothetical phage protein [Staphylococcus aureus subsp. aureus MSSA476] gi|57285483|gb|AAW37577.1| prophage L54a, major capsid protein, putative [Staphylococcus aureus subsp. aureus COL] gi|62636010|gb|AAX91121.1| ORF009 [Staphylococcus phage 42E] gi|62636090|gb|AAX91201.1| ORF010 [Staphylococcus phage 47] gi|87127703|gb|ABD22217.1| phiSLT ORF387-like protein, putative phage capsid protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202806|gb|ABD30616.1| conserved hypothetical phage protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|215260500|gb|ACJ64630.1| gp41 [Staphylococcus phage phiSauS-IPLA35] gi|295128375|gb|EFG58009.1| hypothetical protein SIAG_00543 [Staphylococcus aureus subsp. aureus EMRSA16] gi|315128435|gb|EFT84443.1| hypothetical protein CGSSa03_13332 [Staphylococcus aureus subsp. aureus CGS03] gi|315197737|gb|EFU28071.1| hypothetical protein CGSSa01_10798 [Staphylococcus aureus subsp. aureus CGS01] gi|329729407|gb|EGG65812.1| phage capsid family [Staphylococcus aureus subsp. aureus 21189] gi|329730628|gb|EGG67013.1| phage capsid family [Staphylococcus aureus subsp. aureus 21193] Length = 387 Score = 36.3 bits (82), Expect = 7.5, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 46/129 (35%), Gaps = 10/129 (7%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + L +G + L+ K DP++ ++ + K L E+ L Sbjct: 6 ELKQSLGMIG-----QQLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 55 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ ++ D + +++ + + + Y+ E S +A + Sbjct: 56 VERQVQDIEEKEKAKVKDKGEAYQSLSDNEKMVKAKAEFYRHAILPNEFEKPSMEAQRLL 115 Query: 122 HAGAGGTES 130 HA G +S Sbjct: 116 HALPTGNDS 124 >gi|227522520|ref|ZP_03952569.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus hilgardii ATCC 8290] gi|227090342|gb|EEI25654.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus hilgardii ATCC 8290] Length = 648 Score = 36.3 bits (82), Expect = 7.6, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 32/73 (43%), Gaps = 6/73 (8%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---- 57 KL+R++ L D + + + ++ P ++ ++ +A L ++ + +D I Sbjct: 578 KLNREVIDLES--QLDELSKSKNNIESQMAQPEVFNDLDKASDLQKKLEMIDQKIKETES 635 Query: 58 FIKEIQDRLCDNL 70 ++ +L D Sbjct: 636 KWEQKSLQLEDIE 648 >gi|19112609|ref|NP_595817.1| SWI/SNF and RSC complex subunit Ssr4 [Schizosaccharomyces pombe 972h-] gi|74625443|sp|Q9P7Y0|SSR4_SCHPO RecName: Full=SWI/SNF and RSC complexes subunit ssr4 gi|6723959|emb|CAB66433.1| SWI/SNF and RSC complex subunit Ssr4 [Schizosaccharomyces pombe] Length = 395 Score = 36.3 bits (82), Expect = 7.6, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 29/90 (32%), Gaps = 1/90 (1%) Query: 28 TKTEDPHLWQNVIEAKMLMRERQH-LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 E P LWQ + L +E + + + ++ Q D ++ + S ++ Sbjct: 306 KDIEPPALWQEPNSMEELGKELKDNKEQLVKQDQKYQSLQGDLSYTDSMSNLLKEFSNIK 365 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSND 116 + K E+ + + + Sbjct: 366 SAEECDVLQKKIEEFAEAKIVPLSHVTERS 395 >gi|325202191|gb|ADY97645.1| ABC transporter, ATP-binding protein Uup [Neisseria meningitidis M01-240149] Length = 636 Score = 36.3 bits (82), Expect = 7.7, Method: Composition-based stats. Identities = 5/57 (8%), Positives = 22/57 (38%), Gaps = 4/57 (7%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLC 67 + + +N + DP ++++ +A L + ++ + + ++ + Sbjct: 576 EIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLETKQN 632 >gi|303249531|ref|ZP_07335738.1| putative ABC transporter ATP-binding protein YheS [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307251842|ref|ZP_07533743.1| Uncharacterized ABC transporter ATP-binding protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302651605|gb|EFL81754.1| putative ABC transporter ATP-binding protein YheS [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860534|gb|EFM92546.1| Uncharacterized ABC transporter ATP-binding protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 638 Score = 36.3 bits (82), Expect = 7.7, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 7/75 (9%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAK---MLMRERQHLDNAISFI 59 L +++ L D + A ++L+ L +++ +A+ L ++ + A+ I Sbjct: 566 LRKKITQLEK--DLEKASEKLNQLEALLASSEIYEAENKAQLTETLAKQIEE-KKAVEEI 622 Query: 60 K-EIQDRLCDNLILL 73 + E D LL Sbjct: 623 EMEWLDCQEQLEALL 637 >gi|302340442|ref|YP_003805648.1| hypothetical protein Spirs_3969 [Spirochaeta smaragdinae DSM 11293] gi|301637627|gb|ADK83054.1| hypothetical protein Spirs_3969 [Spirochaeta smaragdinae DSM 11293] Length = 311 Score = 36.3 bits (82), Expect = 7.7, Method: Composition-based stats. Identities = 8/76 (10%), Positives = 27/76 (35%), Gaps = 2/76 (2%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + ++ R L + ++ + V + ++E + +++ ++ +E+ D + L Sbjct: 149 NVEDVSDRYYDLEHRIKNKEIL--VERYQKYLQEAKSVEDLLTVERELNDATTELEQLKG 206 Query: 75 LALEEDDCSILQETSD 90 D Sbjct: 207 SFQNLDHRVSFSTLHM 222 >gi|290998351|ref|XP_002681744.1| predicted protein [Naegleria gruberi] gi|284095369|gb|EFC49000.1| predicted protein [Naegleria gruberi] Length = 435 Score = 36.3 bits (82), Expect = 7.7, Method: Composition-based stats. Identities = 32/303 (10%), Positives = 78/303 (25%), Gaps = 25/303 (8%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQ--HLDNAISFIKEIQDRLCDNLILLEL 75 ++L + + + ++++R L N + +I L + + Sbjct: 97 EIAKQLETIYEQLV---FILTSKNIQDILQKRSNFDLRNLLGGTDKIIYSLINRMSNSID 153 Query: 76 ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135 + + + Q + ++ + L+ ++ + + + Sbjct: 154 FSFDSTHVLRLPKNTRNQIGDIMMKNRVQNKLMFSLMICDNTLVHMIRNK---KYNMKTK 210 Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS--ATLLIKGPNAYGWLKGEQGVHRLVRI 193 LL + + G+ W + Sbjct: 211 DLLLLMNFVGSAHSSMKSSETWTPICLPGLSETSYVYAYIIYFTENWCYVMICMSTESFF 270 Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253 S ++ +P V + + + S D +H N + Sbjct: 271 DCQQSQTQTLHDLIQSECFPSVIFTNVRQTASSPTADDFLMTQT-FLRHFNCRIKST--- 326 Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313 T + Q + + +LY+ +K E I N G Q+R Sbjct: 327 ---TISICQTCSTKFLPPYHTKKERKRILRLYKSTREKLESIPNKNI--------GSQVR 375 Query: 314 SYV 316 +YV Sbjct: 376 TYV 378 >gi|269203616|ref|YP_003282885.1| phage major capsid protein [Staphylococcus aureus subsp. aureus ED98] gi|262075906|gb|ACY11879.1| phage major capsid protein [Staphylococcus aureus subsp. aureus ED98] Length = 387 Score = 36.3 bits (82), Expect = 7.7, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 45/129 (34%), Gaps = 10/129 (7%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + L +G + L+ K DP++ ++ + K L E+ L Sbjct: 6 ELKQSLGMIG-----QQLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 55 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ ++ D + +++ + + Y+ E S +A + Sbjct: 56 VERQVQDIEEKEKAKVKDTGEAYQSLNDNEKMVKAKAEFYRHAILPNEFEKPSMEAQRLL 115 Query: 122 HAGAGGTES 130 HA G +S Sbjct: 116 HALPTGNDS 124 >gi|260592374|ref|ZP_05857832.1| DNA gyrase, A subunit [Prevotella veroralis F0319] gi|260535668|gb|EEX18285.1| DNA gyrase, A subunit [Prevotella veroralis F0319] Length = 862 Score = 36.3 bits (82), Expect = 7.7, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 18/55 (32%), Gaps = 4/55 (7%) Query: 6 QLNCLGGLFDWDNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFI 59 +L+ L G D Q L +D + N K +M+E L Sbjct: 430 RLSQLTG-LRLDQLHQEFEELMQTIKDLQEILNNPERCKEVMKE--ELQEVKEKY 481 >gi|46143825|ref|ZP_00133952.2| COG0488: ATPase components of ABC transporters with duplicated ATPase domains [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126207793|ref|YP_001053018.1| putative ABC transporter ATP-binding protein YheS [Actinobacillus pleuropneumoniae L20] gi|126096585|gb|ABN73413.1| putative ABC transporter ATP-binding protein YheS [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 638 Score = 36.3 bits (82), Expect = 7.7, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 7/75 (9%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAK---MLMRERQHLDNAISFI 59 L +++ L D + A ++L+ L +++ +A+ L ++ + A+ I Sbjct: 566 LRKKITQLEK--DLEKASEKLNQLEALLASSEIYEAENKAQLTETLAKQIEE-KKAVEEI 622 Query: 60 K-EIQDRLCDNLILL 73 + E D LL Sbjct: 623 EMEWLDCQEQLEALL 637 >gi|254673185|emb|CBA08074.1| ABC transporter, ATP-binding protein [Neisseria meningitidis alpha275] Length = 636 Score = 36.3 bits (82), Expect = 7.8, Method: Composition-based stats. Identities = 5/57 (8%), Positives = 22/57 (38%), Gaps = 4/57 (7%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLC 67 + + +N + DP ++++ +A L + ++ + + ++ + Sbjct: 576 EIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLETKQN 632 >gi|149183960|ref|ZP_01862338.1| ABC transporter, ATP-binding protein [Bacillus sp. SG-1] gi|148848331|gb|EDL62603.1| ABC transporter, ATP-binding protein [Bacillus sp. SG-1] Length = 655 Score = 36.3 bits (82), Expect = 7.8, Method: Composition-based stats. Identities = 7/47 (14%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Query: 8 NCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53 + + +FD + L L + DP ++++ + +++E + Sbjct: 96 DEMLSVFDDLRKLEEDLRKLEQQMADPAVYEHEEKYNRVLKEYDTIQ 142 >gi|5262574|emb|CAB45729.1| hypothetical protein [Homo sapiens] Length = 1092 Score = 36.3 bits (82), Expect = 7.8, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 46/113 (40%), Gaps = 5/113 (4%) Query: 16 WDNAVQRLSFLNTKTED--PHLWQNVIEAKMLMRER-QHLDNAISFIKEIQDRLCDN--L 70 RL L ++ED P L +++ K L++E Q L + +KE+Q D Sbjct: 26 IKELKSRLQVLKAQSEDPLPELHEDLHNEKELIKELEQSLASWTQNLKELQTMKADLTRH 85 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 +L+E + + +++ + ++ E L+ N+ E+ A Sbjct: 86 VLVEDVMVLKEQIEHLHRQWEDLCLRVAIRKQEIEDRLNTWVVFNEKNKELCA 138 >gi|325208055|gb|ADZ03507.1| ABC transporter, ATP-binding protein Uup [Neisseria meningitidis NZ-05/33] Length = 636 Score = 36.3 bits (82), Expect = 7.9, Method: Composition-based stats. Identities = 5/57 (8%), Positives = 22/57 (38%), Gaps = 4/57 (7%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLC 67 + + +N + DP ++++ +A L + ++ + + ++ + Sbjct: 576 EIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLETKQN 632 >gi|325136398|gb|EGC59006.1| ABC transporter, ATP-binding protein Uup [Neisseria meningitidis M0579] Length = 636 Score = 36.3 bits (82), Expect = 7.9, Method: Composition-based stats. Identities = 5/57 (8%), Positives = 22/57 (38%), Gaps = 4/57 (7%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLC 67 + + +N + DP ++++ +A L + ++ + + ++ + Sbjct: 576 EIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLETKQN 632 >gi|167036929|ref|YP_001664507.1| glycosyltransferase 36 associated [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320115348|ref|YP_004185507.1| glycosyltransferase 36 [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166855763|gb|ABY94171.1| glycosyltransferase 36 associated [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319928439|gb|ADV79124.1| glycosyltransferase 36 [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 2887 Score = 36.3 bits (82), Expect = 7.9, Method: Composition-based stats. Identities = 12/116 (10%), Positives = 42/116 (36%), Gaps = 8/116 (6%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRL--SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58 ++L++ L + + + + + + LN KT P W+ + + + ++ + Sbjct: 1153 IELAKGLKDTIKMLNIEGITEDIFRNILNKKTLMPSDWE--VFLSKISEKLSSTEDEVGN 1210 Query: 59 IKEIQDRL----CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 I+ +++ + + L ++ + + + K+ E + Sbjct: 1211 IERLKNIIGALKREMKEFLAWTEFDERQKEQEIFKRYKEVFEEHSSPKELEKVYKN 1266 >gi|21748548|dbj|BAC03411.1| FLJ00347 protein [Homo sapiens] Length = 1752 Score = 36.3 bits (82), Expect = 7.9, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 46/113 (40%), Gaps = 5/113 (4%) Query: 16 WDNAVQRLSFLNTKTED--PHLWQNVIEAKMLMRER-QHLDNAISFIKEIQDRLCDN--L 70 RL L ++ED P L +++ K L++E Q L + +KE+Q D Sbjct: 687 IKELKSRLQVLKAQSEDPLPELHEDLHNEKELIKELEQSLASWTQNLKELQTMKADLTRH 746 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 +L+E + + +++ + ++ E L+ N+ E+ A Sbjct: 747 VLVEDVMVLKEQIEHLHRQWEDLCLRVAIRKQEIEDRLNTWVVFNEKNKELCA 799 >gi|307249525|ref|ZP_07531512.1| Uncharacterized ABC transporter ATP-binding protein [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858380|gb|EFM90449.1| Uncharacterized ABC transporter ATP-binding protein [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 638 Score = 36.3 bits (82), Expect = 8.0, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 30/75 (40%), Gaps = 7/75 (9%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAK---MLMRERQHLDNAISFI 59 L +++ L D + A ++L+ L +++ +A+ L ++ A+ I Sbjct: 566 LRKKITQLEK--DLEKASEKLNQLEALLASSEIYEAENKAQLTETLAKQI-EAKKAVEEI 622 Query: 60 K-EIQDRLCDNLILL 73 + E D LL Sbjct: 623 EMEWLDCQEQLEALL 637 >gi|240949402|ref|ZP_04753743.1| putative ABC transporter ATP-binding protein YheS [Actinobacillus minor NM305] gi|240296151|gb|EER46807.1| putative ABC transporter ATP-binding protein YheS [Actinobacillus minor NM305] Length = 639 Score = 36.3 bits (82), Expect = 8.0, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 28/75 (37%), Gaps = 5/75 (6%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLMRERQHLDNAISFIK 60 L +++ L D D A +L+ L T ++ +N + + ++ + I+ Sbjct: 565 LRKKITQLEK--DLDKASTQLAELETLLASSEIYEAENKAKLTETLAKQVEAKQKVEQIE 622 Query: 61 -EIQDRLCDNLILLE 74 E + +L Sbjct: 623 MEWLEAQEQLEFMLN 637 >gi|148263318|ref|YP_001230024.1| ABC transporter related [Geobacter uraniireducens Rf4] gi|146396818|gb|ABQ25451.1| ABC transporter related protein [Geobacter uraniireducens Rf4] Length = 645 Score = 36.3 bits (82), Expect = 8.1, Method: Composition-based stats. Identities = 9/61 (14%), Positives = 21/61 (34%), Gaps = 3/61 (4%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS-FIKEI 62 ++L L + + L+ L + +P + + + E L I+ E Sbjct: 583 QKRLAELEA--EIEIKEGLLAGLEQRMAEPEFFADHEATRRTGEEHTALTARIAVLYGEW 640 Query: 63 Q 63 + Sbjct: 641 E 641 >gi|307245122|ref|ZP_07527215.1| Uncharacterized ABC transporter ATP-binding protein [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307254078|ref|ZP_07535925.1| Uncharacterized ABC transporter ATP-binding protein [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258533|ref|ZP_07540270.1| Uncharacterized ABC transporter ATP-binding protein [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306854011|gb|EFM86223.1| Uncharacterized ABC transporter ATP-binding protein [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306863003|gb|EFM94950.1| Uncharacterized ABC transporter ATP-binding protein [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867437|gb|EFM99288.1| Uncharacterized ABC transporter ATP-binding protein [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 638 Score = 36.3 bits (82), Expect = 8.1, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 29/74 (39%), Gaps = 5/74 (6%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLMRERQHLDNAISFIK 60 L +++ L D + A ++L+ L ++ +N + + ++ A+ I+ Sbjct: 566 LRKKITQLEK--DLEKASEKLNQLEALLASSEIYEAENKAQLTETLAKQIEAKKAVEEIE 623 Query: 61 -EIQDRLCDNLILL 73 E D LL Sbjct: 624 MEWLDCQEQLEALL 637 >gi|228472042|ref|ZP_04056810.1| ABC transporter domain protein [Capnocytophaga gingivalis ATCC 33624] gi|228276654|gb|EEK15367.1| ABC transporter domain protein [Capnocytophaga gingivalis ATCC 33624] Length = 563 Score = 36.3 bits (82), Expect = 8.1, Method: Composition-based stats. Identities = 5/46 (10%), Positives = 18/46 (39%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 ++ + +N + + + + LM ++ L + I + + Sbjct: 103 KLLEEFNHINDLFGLEENYSDPDKMQKLMDKQAELQDKIDALNAWE 148 >gi|161869934|ref|YP_001599103.1| ABC transporter ATP-binding protein [Neisseria meningitidis 053442] gi|161595487|gb|ABX73147.1| ABC transporter ATP-binding protein [Neisseria meningitidis 053442] Length = 641 Score = 36.3 bits (82), Expect = 8.1, Method: Composition-based stats. Identities = 5/57 (8%), Positives = 22/57 (38%), Gaps = 4/57 (7%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLC 67 + + +N + DP ++++ +A L + ++ + + ++ + Sbjct: 581 EIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLETKQN 637 >gi|26553999|ref|NP_757933.1| translocase [Mycoplasma penetrans HF-2] gi|81846210|sp|Q8EVL6|SECA_MYCPE RecName: Full=Protein translocase subunit secA gi|26454007|dbj|BAC44337.1| preprotein translocase SecA [Mycoplasma penetrans HF-2] Length = 1405 Score = 36.3 bits (82), Expect = 8.1, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 38/119 (31%), Gaps = 14/119 (11%) Query: 8 NCLGGLFDWDNAVQRLSFLNTKT--EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65 L L D+ RL +N EDP + ER+ L+ + + Sbjct: 1160 QELNTLLQLDDEKDRLEKINQLLNKEDPEVL-----------ERKELERQVE-FETPVYY 1207 Query: 66 LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124 L D L + + +E S + E + +FE L D EV A Sbjct: 1208 LEDIPEGESLDNFKAMDNPHEEQSFEDNLVDEENQQLEFEEALDEVIDDGQFNDEVEAA 1266 >gi|325130163|gb|EGC52941.1| ABC transporter, ATP-binding protein Uup [Neisseria meningitidis OX99.30304] Length = 636 Score = 36.3 bits (82), Expect = 8.2, Method: Composition-based stats. Identities = 5/57 (8%), Positives = 22/57 (38%), Gaps = 4/57 (7%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLC 67 + + +N + DP ++++ +A L + ++ + + ++ + Sbjct: 576 EIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLETKQN 632 >gi|195579744|ref|XP_002079721.1| GD24107 [Drosophila simulans] gi|194191730|gb|EDX05306.1| GD24107 [Drosophila simulans] Length = 1106 Score = 36.3 bits (82), Expect = 8.2, Method: Composition-based stats. Identities = 17/125 (13%), Positives = 37/125 (29%), Gaps = 8/125 (6%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE-RQHLDNAISFIKE 61 + +L D +++ L K + + + +E + + + Sbjct: 589 IKEELKE--THLQLDERQKKIEELEEKLKQT-----QQSEQKVQQESQTSKEQLTELHQS 641 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 +Q+ EL ++ + Q KL Q E+ S ++ D LE Sbjct: 642 LQELQDSVKQKEELVQNLEEKVRESSSIIEGQNTKLNESNVQLENQTSCLKETQDQLLES 701 Query: 122 HAGAG 126 Sbjct: 702 QKKEK 706 >gi|148267496|ref|YP_001246439.1| phage major capsid protein, HK97 [Staphylococcus aureus subsp. aureus JH9] gi|150393550|ref|YP_001316225.1| phage major capsid protein HK97 [Staphylococcus aureus subsp. aureus JH1] gi|147740565|gb|ABQ48863.1| phage major capsid protein, HK97 [Staphylococcus aureus subsp. aureus JH9] gi|149946002|gb|ABR51938.1| phage major capsid protein HK97 [Staphylococcus aureus subsp. aureus JH1] Length = 387 Score = 36.3 bits (82), Expect = 8.2, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 46/129 (35%), Gaps = 10/129 (7%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + L +G + L+ K DP++ ++ + K L E+ L Sbjct: 6 ELKQSLGMIG-----QQLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 55 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ ++ D + +++ + + + Y+ E S +A + Sbjct: 56 VERQVQDIEEKEKAKVKDKGEAYQSLSDNEKMVKAKAEFYRHAILPNEFEKPSMEAQRLL 115 Query: 122 HAGAGGTES 130 HA G +S Sbjct: 116 HALPTGNDS 124 >gi|315924549|ref|ZP_07920768.1| ABC superfamily ATP binding cassette transporter, ABC protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315622079|gb|EFV02041.1| ABC superfamily ATP binding cassette transporter, ABC protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 641 Score = 35.9 bits (81), Expect = 8.3, Method: Composition-based stats. Identities = 7/70 (10%), Positives = 23/70 (32%), Gaps = 6/70 (8%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN----AISFI 59 L L + +++ L + P + ++ + + + L ++ Sbjct: 574 KNLLKTLEK--KIEACDDKIADLESLMCQPDFYNDIEQVSQITHDYDVLKKESNQLLNQW 631 Query: 60 KEIQDRLCDN 69 +++ L D Sbjct: 632 EDLALDLEDA 641 >gi|319943845|ref|ZP_08018126.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lautropia mirabilis ATCC 51599] gi|319743078|gb|EFV95484.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lautropia mirabilis ATCC 51599] Length = 675 Score = 35.9 bits (81), Expect = 8.3, Method: Composition-based stats. Identities = 8/59 (13%), Positives = 23/59 (38%), Gaps = 1/59 (1%) Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK-EIQDRLCDNLILLE 74 ++ R + L+ + P + + A RER + + ++ + +R + + Sbjct: 612 ESLQARATTLDEQLAAPDAFADRAAATERQRERAQIATELENLENDWLERQAEIEEIER 670 >gi|297266033|ref|XP_002808087.1| PREDICTED: LOW QUALITY PROTEIN: girdin-like [Macaca mulatta] Length = 1960 Score = 35.9 bits (81), Expect = 8.3, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 51/165 (30%), Gaps = 11/165 (6%) Query: 2 KLSRQLNCLGG----LFDWDNAVQRL----SFLNTKT--EDPHLWQNVIEAKMLMRERQH 51 +L ++ + G + + QRL L + E L +K LM+E+ Sbjct: 478 ELRTTVDSVEGNASKILKIEKENQRLSKKVEILENEIVQEKQSLQNCQNLSKDLMKEKAQ 537 Query: 52 LDNAISFIKE-IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L+ I ++E + ++ E + + R+K + + Sbjct: 538 LEKTIETLRENSERQIKILEQENEHLNQTVSSLRQRSQISAEARVKDIEKENKILHESIK 597 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 E S + +E E + + R E + E Sbjct: 598 ETSSKLSKIEFEKRQIKKELEHYKEKGERAEELENELHHLEKENE 642 >gi|256820824|ref|YP_003142103.1| putative ABC transporter ATP-binding protein [Capnocytophaga ochracea DSM 7271] gi|256582407|gb|ACU93542.1| ABC transporter related [Capnocytophaga ochracea DSM 7271] Length = 563 Score = 35.9 bits (81), Expect = 8.3, Method: Composition-based stats. Identities = 5/46 (10%), Positives = 18/46 (39%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 ++ + +N + + + + LM ++ L + I + + Sbjct: 103 KLLEEFNHINDLFGLEENYSDPDKMQKLMDKQAELQDKIDALNAWE 148 >gi|29028650|ref|NP_803339.1| SLT orf 37-like protein [Staphylococcus phage phi 12] gi|161509679|ref|YP_001575338.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|209363590|ref|YP_002268008.1| putative capsid protein [Staphylococcus phage phi2958PVL] gi|257432455|ref|ZP_05608818.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus E1410] gi|258420297|ref|ZP_05683244.1| bacteriophage capsid protein [Staphylococcus aureus A9719] gi|258448836|ref|ZP_05696946.1| bacteriophage capsid protein [Staphylococcus aureus A6224] gi|282919222|ref|ZP_06326957.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus C427] gi|294848477|ref|ZP_06789223.1| phage major capsid protein [Staphylococcus aureus A9754] gi|295407558|ref|ZP_06817351.1| bacteriophage capsid protein [Staphylococcus aureus A8819] gi|297207830|ref|ZP_06924264.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297246588|ref|ZP_06930421.1| bacteriophage capsid protein [Staphylococcus aureus A8796] gi|297591012|ref|ZP_06949650.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus MN8] gi|300911916|ref|ZP_07129359.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus TCH70] gi|18920574|gb|AAL82314.1| SLT orf 37-like protein [Staphylococcus phage phi 12] gi|160368488|gb|ABX29459.1| possible bacteriophage capsid protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|208973091|dbj|BAG74407.1| putative capsid protein [Staphylococcus phage phi2958PVL] gi|257283334|gb|EEV13466.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus E1410] gi|257843722|gb|EEV68124.1| bacteriophage capsid protein [Staphylococcus aureus A9719] gi|257857873|gb|EEV80764.1| bacteriophage capsid protein [Staphylococcus aureus A6224] gi|282317032|gb|EFB47406.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus C427] gi|294824503|gb|EFG40926.1| phage major capsid protein [Staphylococcus aureus A9754] gi|294967577|gb|EFG43613.1| bacteriophage capsid protein [Staphylococcus aureus A8819] gi|296887546|gb|EFH26445.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297176546|gb|EFH35811.1| bacteriophage capsid protein [Staphylococcus aureus A8796] gi|297575898|gb|EFH94614.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus MN8] gi|300886162|gb|EFK81364.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus TCH70] gi|302333118|gb|ADL23311.1| putative phage capsid protein [Staphylococcus aureus subsp. aureus JKD6159] gi|320140400|gb|EFW32255.1| phage capsid family protein [Staphylococcus aureus subsp. aureus MRSA131] gi|320142756|gb|EFW34559.1| phage capsid family protein [Staphylococcus aureus subsp. aureus MRSA177] Length = 402 Score = 35.9 bits (81), Expect = 8.3, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 46/129 (35%), Gaps = 10/129 (7%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + L +G + L+ K DP++ ++ + K L E+ L Sbjct: 21 ELKQSLGMIG-----QQLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ ++ D + +++ + + + Y+ E S +A + Sbjct: 71 VERQVQDIEEKEKAKVKDKGEAYQSLSDNEKMVKAKAEFYRHAILPNEFEKPSMEAQRLL 130 Query: 122 HAGAGGTES 130 HA G +S Sbjct: 131 HALPTGNDS 139 >gi|315223978|ref|ZP_07865822.1| ABC superfamily ATP binding cassette transporter, ABC protein [Capnocytophaga ochracea F0287] gi|314946082|gb|EFS98087.1| ABC superfamily ATP binding cassette transporter, ABC protein [Capnocytophaga ochracea F0287] Length = 563 Score = 35.9 bits (81), Expect = 8.4, Method: Composition-based stats. Identities = 5/46 (10%), Positives = 18/46 (39%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 ++ + +N + + + + LM ++ L + I + + Sbjct: 103 KLLEEFNHINDLFGLEENYSDPDKMQKLMDKQAELQDKIDALNAWE 148 >gi|254670733|emb|CBA06948.1| ABC transporter, ATP-binding protein [Neisseria meningitidis alpha153] Length = 636 Score = 35.9 bits (81), Expect = 8.4, Method: Composition-based stats. Identities = 5/57 (8%), Positives = 22/57 (38%), Gaps = 4/57 (7%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLC 67 + + +N + DP ++++ +A L + ++ + + ++ + Sbjct: 576 EIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLETKQN 632 >gi|119484150|ref|XP_001261978.1| hypothetical protein NFIA_097030 [Neosartorya fischeri NRRL 181] gi|119410134|gb|EAW20081.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181] Length = 1143 Score = 35.9 bits (81), Expect = 8.4, Method: Composition-based stats. Identities = 11/90 (12%), Positives = 28/90 (31%), Gaps = 7/90 (7%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 KL +N L + N ++ + + + L++ + L+ I+ +K Sbjct: 560 KLKNTINELR--MELGNLEEKRKDIEESLAEAE-----KSNQELLQTKSELEGQIAALKT 612 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDN 91 + + +E+ L Sbjct: 613 NIEEAREAHEQELERQKEERAEALANQKQE 642 >gi|298693636|gb|ADI96858.1| SLT orf 37-like protein [Staphylococcus aureus subsp. aureus ED133] Length = 387 Score = 35.9 bits (81), Expect = 8.5, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 47/129 (36%), Gaps = 10/129 (7%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + L +G + L+ K DP++ ++ + K L E+ L Sbjct: 6 ELKQSLGMIG-----QQLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 55 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ ++ D + +++ + +++ Y+ E S +A + Sbjct: 56 VERQVKDIEEKEKAKVKDTGEAYQSLSANEKMVKAKAEFYRHAILPNEFEKPSMEAQRLL 115 Query: 122 HAGAGGTES 130 HA G +S Sbjct: 116 HALPTGNDS 124 >gi|255264657|ref|ZP_05343999.1| holdfast attachment protein C [Thalassiobium sp. R2A62] gi|255106992|gb|EET49666.1| holdfast attachment protein C [Thalassiobium sp. R2A62] Length = 604 Score = 35.9 bits (81), Expect = 8.5, Method: Composition-based stats. Identities = 9/71 (12%), Positives = 25/71 (35%), Gaps = 9/71 (12%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPH-LWQNVIEAKMLMRERQHLDNAISFIKEI 62 +L L + + ++ L T DP + ++ + + D + ++ Sbjct: 535 KHRLQELPSV--IERYEAEIAKLETLMSDPDLFTKEPVKFQKVT------DALVERQSKL 586 Query: 63 QDRLCDNLILL 73 + + L+L Sbjct: 587 AEAEEEWLMLE 597 >gi|17861384|gb|AAL33802.1| nesprin-2 gamma [Homo sapiens] Length = 3270 Score = 35.9 bits (81), Expect = 8.5, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 46/113 (40%), Gaps = 5/113 (4%) Query: 16 WDNAVQRLSFLNTKTED--PHLWQNVIEAKMLMRER-QHLDNAISFIKEIQDRLCDN--L 70 RL L ++ED P L +++ K L++E Q L + +KE+Q D Sbjct: 2204 IKELKSRLQVLKAQSEDPLPELHEDLHNEKELIKELEQSLASWTQNLKELQTMKADLTRH 2263 Query: 71 ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 +L+E + + +++ + ++ E L+ N+ E+ A Sbjct: 2264 VLVEDVMVLKEQIEHLHRQWEDLCLRVAIRKQEIEDRLNTWVVFNEKNKELCA 2316 >gi|327405394|ref|YP_004346232.1| ATP-binding cassette protein, ChvD family [Fluviicola taffensis DSM 16823] gi|327320902|gb|AEA45394.1| ATP-binding cassette protein, ChvD family [Fluviicola taffensis DSM 16823] Length = 560 Score = 35.9 bits (81), Expect = 8.6, Method: Composition-based stats. Identities = 25/189 (13%), Positives = 52/189 (27%), Gaps = 13/189 (6%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74 + + ++ +N D + + + L+ + + + I + + + Sbjct: 99 EIVDILKEYEEINASFMDEDVLNDPDKMDKLIARQGVVQDKIDAVDAWELDNKLERAMDA 158 Query: 75 LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134 L DD I + +R+ L + +L + +N ES DW Sbjct: 159 LRCPPDDQLIETLSGGEKRRVALCRLLLKSPDILLLDEPTNHL---------DAESIDWL 209 Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194 L+ Y L+ AG +G G Sbjct: 210 EQHLQQYKGTVIAVTHDRYFLD----NVAGWILELDRGEGIPWKGNYSSWLEQKGERLKG 265 Query: 195 PYDSNSRRH 203 + S+R Sbjct: 266 EEKTESKRQ 274 >gi|308389211|gb|ADO31531.1| putative ABC transporter ATP-binding protein [Neisseria meningitidis alpha710] Length = 635 Score = 35.9 bits (81), Expect = 8.6, Method: Composition-based stats. Identities = 5/57 (8%), Positives = 22/57 (38%), Gaps = 4/57 (7%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLC 67 + + +N + DP ++++ +A L + ++ + + ++ + Sbjct: 575 EIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLETKQN 631 >gi|5051458|emb|CAB44978.1| putative ATP-binding protein [Neisseria meningitidis] gi|325142287|gb|EGC64701.1| ABC transporter, ATP-binding protein Uup [Neisseria meningitidis 961-5945] gi|325198260|gb|ADY93716.1| ABC transporter, ATP-binding protein Uup [Neisseria meningitidis G2136] Length = 636 Score = 35.9 bits (81), Expect = 8.6, Method: Composition-based stats. Identities = 5/57 (8%), Positives = 22/57 (38%), Gaps = 4/57 (7%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLC 67 + + +N + DP ++++ +A L + ++ + + ++ + Sbjct: 576 EIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLETKQN 632 >gi|270159507|ref|ZP_06188163.1| putative peptide chain release factor [Legionella longbeachae D-4968] gi|289165692|ref|YP_003455830.1| unknown proteins [Legionella longbeachae NSW150] gi|269987846|gb|EEZ94101.1| putative peptide chain release factor [Legionella longbeachae D-4968] gi|288858865|emb|CBJ12787.1| putative unknown proteins [Legionella longbeachae NSW150] Length = 134 Score = 35.9 bits (81), Expect = 8.6, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 43/83 (51%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 +++ I+E+D SG GGQ ++ T S V + H P+G+ ++CQ+ RS+ N+ A Sbjct: 14 MMKLSINEADLIEKFILGSGKGGQKLHKTASTVYLKHEPSGLEIKCQESRSREDNRYFAR 73 Query: 278 NMLRAKLYELELQKREEIANIGE 300 L KL + ++ + E Sbjct: 74 VRLCEKLNAILSLEKTQKQQKIE 96 >gi|255012082|ref|ZP_05284208.1| putative ATP-binding component of ABC transporter [Bacteroides fragilis 3_1_12] gi|313149923|ref|ZP_07812116.1| ABC transporter ATP-binding protein [Bacteroides fragilis 3_1_12] gi|313138690|gb|EFR56050.1| ABC transporter ATP-binding protein [Bacteroides fragilis 3_1_12] Length = 651 Score = 35.9 bits (81), Expect = 8.6, Method: Composition-based stats. Identities = 10/75 (13%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Query: 2 KLSRQLNCL-GGLFDWDNAVQR----LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56 + ++++ L + D + A+++ ++ L K P ++ + + +Q LD+ + Sbjct: 576 EFNKKIKKLERQVADCEAAIEQTESAIAILEEKMATPDGASDMSLYEQHQKLKQQLDHTV 635 Query: 57 SFIKEIQDRLCDNLI 71 + + L + Sbjct: 636 EEWERVSMELEEMNE 650 >gi|326681219|ref|XP_003201750.1| PREDICTED: voltage-dependent L-type calcium channel subunit alpha-1D, partial [Danio rerio] Length = 659 Score = 35.9 bits (81), Expect = 8.7, Method: Composition-based stats. Identities = 15/123 (12%), Positives = 36/123 (29%), Gaps = 7/123 (5%) Query: 32 DPHLWQNVIEAK-----MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86 D + +AK +RE+Q L+ + + + D E +++ Sbjct: 5 DSEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPDNEEEGDQEAKRNRV 64 Query: 87 ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146 +D + +S + + V+ G + + + R R Sbjct: 65 MLADLSRSKSTANSAWFSQSTETQASVPTSENESVNTENPGEDEKIFCGPFCR--WRCWN 122 Query: 147 KRK 149 + Sbjct: 123 RFC 125 >gi|294673435|ref|YP_003574051.1| ABC transporter ATP-binding protein [Prevotella ruminicola 23] gi|294472284|gb|ADE81673.1| ABC transporter, ATP-binding protein [Prevotella ruminicola 23] Length = 565 Score = 35.9 bits (81), Expect = 8.7, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 36/103 (34%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 +A+ +N K P +++ + LM+ + L + I + + L Sbjct: 105 DALAEYDEINVKFGLPEYYEDADKMDKLMQRQAELQDIIDATDAWNMDSKLDRAMAALNC 164 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120 D S+ + +R+ L Q +L + +N E Sbjct: 165 PPGDWSVKNLSGGERRRVALCRLLLQKPDVLLLDEPTNHLDAE 207 >gi|255016863|ref|ZP_05288989.1| hypothetical protein LmonF_01596 [Listeria monocytogenes FSL F2-515] Length = 460 Score = 35.9 bits (81), Expect = 8.7, Method: Composition-based stats. Identities = 9/55 (16%), Positives = 24/55 (43%), Gaps = 2/55 (3%) Query: 1 MKLSRQL-NCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53 ++ S+ + + + +FD L + + +P L+ + + + LM + L Sbjct: 77 LESSKTIWDEMLSVFDSLRKMEADLRKMELRLGEPELYNDPEKYQALMTDYDTLQ 131 >gi|195029889|ref|XP_001987804.1| GH22113 [Drosophila grimshawi] gi|193903804|gb|EDW02671.1| GH22113 [Drosophila grimshawi] Length = 148 Score = 35.9 bits (81), Expect = 8.7, Method: Composition-based stats. Identities = 27/77 (35%), Positives = 39/77 (50%) Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280 + ESD R SG GGQ VN T++ V + H+PTG+ V+C R KN+ +A +L Sbjct: 32 PSLQESDIEETLMRGSGPGGQAVNKTNNCVFLRHLPTGLTVKCHLHRLASKNRIEARKIL 91 Query: 281 RAKLYELELQKREEIAN 297 KL ++ A Sbjct: 92 LDKLDAHLNGEQSIAAQ 108 >gi|282927350|ref|ZP_06334968.1| phage major capsid protein [Staphylococcus aureus A10102] gi|282590674|gb|EFB95750.1| phage major capsid protein [Staphylococcus aureus A10102] Length = 402 Score = 35.9 bits (81), Expect = 8.7, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 46/129 (35%), Gaps = 10/129 (7%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + L +G + L+ K DP++ ++ + K L E+ L Sbjct: 21 ELKQSLGMIG-----QQLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ ++ D + +++ + + + Y+ E S +A + Sbjct: 71 VERQVQDIEEKEKAKVKDKGEAYQSLSDNEKMVKAKAEFYRHAILPNEFEKPSMEAQRLL 130 Query: 122 HAGAGGTES 130 HA G +S Sbjct: 131 HALPTGNDS 139 >gi|8393030|ref|NP_058994.1| voltage-dependent L-type calcium channel subunit alpha-1D [Rattus norvegicus] gi|6165987|sp|P27732|CAC1D_RAT RecName: Full=Voltage-dependent L-type calcium channel subunit alpha-1D; AltName: Full=Calcium channel, L type, alpha-1 polypeptide, isoform 2; AltName: Full=Rat brain class D; Short=RBD; AltName: Full=Voltage-gated calcium channel subunit alpha Cav1.3 gi|736712|dbj|BAA07282.1| L-type voltage-dependent calcium channel alpha 1 subunit [Rattus norvegicus] Length = 2203 Score = 35.9 bits (81), Expect = 8.7, Method: Composition-based stats. Identities = 14/102 (13%), Positives = 31/102 (30%), Gaps = 1/102 (0%) Query: 42 AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101 + L RE+Q L+ + + + D E E+ + + + E Sbjct: 422 FQKL-REKQQLEEDLKGYLDWITQAEDIDPENEEEGGEEGKRNTSMPTSETESVNTENVS 480 Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 + E+ + A G + + W + + R Sbjct: 481 GEGETQGCCGSLWCWWKRRGAAKTGPSGCRRWGQAISKSKLR 522 >gi|325132091|gb|EGC54787.1| ABC transporter, ATP-binding protein Uup [Neisseria meningitidis M6190] gi|325138024|gb|EGC60597.1| ABC transporter, ATP-binding protein Uup [Neisseria meningitidis ES14902] Length = 636 Score = 35.9 bits (81), Expect = 8.8, Method: Composition-based stats. Identities = 5/57 (8%), Positives = 22/57 (38%), Gaps = 4/57 (7%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLC 67 + + +N + DP ++++ +A L + ++ + + ++ + Sbjct: 576 EIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLETKQN 632 >gi|126658808|ref|ZP_01729952.1| GGDEF domain [Cyanothece sp. CCY0110] gi|126619906|gb|EAZ90631.1| GGDEF domain [Cyanothece sp. CCY0110] Length = 318 Score = 35.9 bits (81), Expect = 8.8, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 38/106 (35%), Gaps = 5/106 (4%) Query: 40 IEAKMLMRER-QHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLE 98 + + ++ER +HL++ + ++E +L D L L + K Sbjct: 118 KQLQKALKERNKHLESVVKALEEANKKLEDISRLDALTQISNRLHFNDCLERE---WKRA 174 Query: 99 VEYKQFESLLSGEADSNDAYLEVHAGAGGTES-QDWANMLLRMYTR 143 + K+ L+ + D Y + + G D A L + R Sbjct: 175 MREKEPLGLILCDIDDFKRYNDTYGHLQGDRCLHDVAQGLNKAVLR 220 >gi|121634824|ref|YP_975069.1| putative ABC transporter ATP-binding protein [Neisseria meningitidis FAM18] gi|120866530|emb|CAM10280.1| putative ABC transporter ATP-binding protein [Neisseria meningitidis FAM18] Length = 641 Score = 35.9 bits (81), Expect = 8.8, Method: Composition-based stats. Identities = 5/57 (8%), Positives = 22/57 (38%), Gaps = 4/57 (7%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLC 67 + + +N + DP ++++ +A L + ++ + + ++ + Sbjct: 581 EIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLETKQN 637 >gi|162461543|ref|NP_001105913.1| histidine kinase [Zea mays] gi|89242037|dbj|BAE80689.1| histidine kinase [Zea mays] Length = 996 Score = 35.9 bits (81), Expect = 8.8, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 38/114 (33%), Gaps = 3/114 (2%) Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDT---YRASGAGGQHVNTTDSAVRITHIPTGVV 260 T+ S+ V + + C +D +R ++ N P+GV Sbjct: 284 TNISNPLVMYGSEVPLGNPSPSHICMLDFGDPFRKHHMVCRYRNKPHVPWSAISTPSGVF 343 Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314 V C ++ ++ ++E K++ A S+ +IR+ Sbjct: 344 VICMLVGYIAGAAWSRYDNVKEDCRKMEELKKQAEAADVAKSQFLATVSHEIRT 397 >gi|218768114|ref|YP_002342626.1| putative ABC transporter ATP-binding protein [Neisseria meningitidis Z2491] gi|5051450|emb|CAB44971.1| putative ATP-binding protein [Neisseria meningitidis] gi|121052122|emb|CAM08438.1| putative ABC transporter ATP-binding protein [Neisseria meningitidis Z2491] gi|319410355|emb|CBY90706.1| putative ABC transporter ATP-binding protein [Neisseria meningitidis WUE 2594] Length = 636 Score = 35.9 bits (81), Expect = 8.8, Method: Composition-based stats. Identities = 5/57 (8%), Positives = 22/57 (38%), Gaps = 4/57 (7%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLC 67 + + +N + DP ++++ +A L + ++ + + ++ + Sbjct: 576 EIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLETKQN 632 >gi|168698806|ref|ZP_02731083.1| ABC transporter ATP-binding protein [Gemmata obscuriglobus UQM 2246] Length = 641 Score = 35.9 bits (81), Expect = 8.8, Method: Composition-based stats. Identities = 7/58 (12%), Positives = 21/58 (36%), Gaps = 3/58 (5%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72 D Q+++ L + P ++++ + M L+ + + + + L Sbjct: 585 DIAKTEQKVADLEAALQTPDVYKDANRLRETM---SDLEKTKGALALLYQHWEEAVEL 639 >gi|158520013|sp|Q99246|CAC1D_MOUSE RecName: Full=Voltage-dependent L-type calcium channel subunit alpha-1D; AltName: Full=Calcium channel, L type, alpha-1 polypeptide isoform 2; AltName: Full=Voltage-gated calcium channel subunit alpha Cav1.3 Length = 2179 Score = 35.9 bits (81), Expect = 8.8, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 29/96 (30%), Gaps = 1/96 (1%) Query: 42 AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101 + L RE+Q L+ + + ++ D E E+ + + + E Sbjct: 422 FQKL-REKQQLEEDLKGYLDWITQVEDIDPENEEEGGEEGKRNTSMPTSETESVNTENVS 480 Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 + E+ A G + + W + Sbjct: 481 GEGETQGCCGTLWCWWKRRGAAKTGPSGCRRWGQAI 516 >gi|736714|dbj|BAA07283.1| L-type voltage-dependent calcium channel alpha 1 subunit [Rattus norvegicus] Length = 1668 Score = 35.9 bits (81), Expect = 8.8, Method: Composition-based stats. Identities = 14/102 (13%), Positives = 31/102 (30%), Gaps = 1/102 (0%) Query: 42 AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101 + L RE+Q L+ + + + D E E+ + + + E Sbjct: 422 FQKL-REKQQLEEDLKGYLDWITQAEDIDPENEEEGGEEGKRNTSMPTSETESVNTENVS 480 Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143 + E+ + A G + + W + + R Sbjct: 481 GEGETQGCCGSLWCWWKRRGAAKTGPSGCRRWGQAISKSKLR 522 >gi|241758790|ref|ZP_04756903.1| ABC transporter ATP-binding protein uup [Neisseria flavescens SK114] gi|241320998|gb|EER57211.1| ABC transporter ATP-binding protein uup [Neisseria flavescens SK114] Length = 635 Score = 35.9 bits (81), Expect = 8.9, Method: Composition-based stats. Identities = 5/50 (10%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD-NAISFIKEIQ 63 + + +N + DP ++++ +A L + ++ + + ++ + Sbjct: 575 EIAALETEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMSLLEKLERWE 624 >gi|329965393|ref|ZP_08302317.1| ATP-binding cassette protein, ChvD family [Bacteroides fluxus YIT 12057] gi|328522185|gb|EGF49299.1| ATP-binding cassette protein, ChvD family [Bacteroides fluxus YIT 12057] Length = 565 Score = 35.9 bits (81), Expect = 9.1, Method: Composition-based stats. Identities = 27/187 (14%), Positives = 55/187 (29%), Gaps = 12/187 (6%) Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77 +A+ +N K P +++ + L + L + I + L Sbjct: 105 DALAEYEEINQKFGLPEYYEDQDKMDKLFSRQAELQDIIDATDAWNLDSKLERAMDALRC 164 Query: 78 EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137 +D S+ + +R+ L Q +L + +N ES DW Sbjct: 165 PPEDQSVEHLSGGERRRVALCRLLLQKPDVLLLDEPTNHL---------DAESIDWLEQH 215 Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197 L+ Y L+ G + P + + + + + Sbjct: 216 LQQYEGTVIAVTHDRYFLDHVAGWILELDRGEG---IPWKGNYSSWLEQKTKRMEMEEKT 272 Query: 198 SNSRRHT 204 ++ RR T Sbjct: 273 ASKRRKT 279 >gi|291386767|ref|XP_002709908.1| PREDICTED: coiled-coil domain containing 88A [Oryctolagus cuniculus] Length = 1871 Score = 35.9 bits (81), Expect = 9.1, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 50/165 (30%), Gaps = 11/165 (6%) Query: 2 KLSRQLNCLGG----LFDWDNAVQRL----SFLNTKT--EDPHLWQNVIEAKMLMRERQH 51 +L + + G + + QRL L + E L +K LM+E+ Sbjct: 478 ELRSSMESVEGNTSKILKIEKENQRLSRKVEMLENEIIQEKQSLQNCQNLSKDLMKEKAQ 537 Query: 52 LDNAISFIKE-IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110 L+ I ++E + ++ E + + R+K + + Sbjct: 538 LEKTIETLRENSERQIKMLEQENEHLNQTVSSLRQRSQISAEARVKDIEKENKILHESIK 597 Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155 E S + +E E + + R E + E Sbjct: 598 ETSSKLSKIEFEKRQIRKELEHYKEKGERAEELENELHHLEKENE 642 >gi|45657623|ref|YP_001709.1| peptide chain release factor 2-like protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45600863|gb|AAS70346.1| peptide chain release factor 2-like protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 155 Score = 35.9 bits (81), Expect = 9.1, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 4/92 (4%) Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277 ++I E++ R+ G GGQ+VN +AV + H PTG+ V+C R+Q N+ +A Sbjct: 19 MEILQIKETELEESFTRSGGKGGQNVNKVSTAVHLRHKPTGIEVKCSLYRTQGLNRYKAR 78 Query: 278 NMLRAKLYELELQKR----EEIANIGESSKTE 305 +L K+ + + E+ + + + + Sbjct: 79 AILCEKIQDFNHKNLGIISEDQKKLIRNKQKD 110 >gi|53713702|ref|YP_099694.1| DNA gyrase A subunit [Bacteroides fragilis YCH46] gi|60681973|ref|YP_212117.1| DNA gyrase A subunit [Bacteroides fragilis NCTC 9343] gi|253565650|ref|ZP_04843105.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|265764026|ref|ZP_06092594.1| DNA gyrase, A subunit [Bacteroides sp. 2_1_16] gi|52216567|dbj|BAD49160.1| DNA gyrase A subunit [Bacteroides fragilis YCH46] gi|60493407|emb|CAH08193.1| DNA gyrase A subunit [Bacteroides fragilis NCTC 9343] gi|251945929|gb|EES86336.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|263256634|gb|EEZ27980.1| DNA gyrase, A subunit [Bacteroides sp. 2_1_16] gi|301163411|emb|CBW22962.1| DNA gyrase A subunit [Bacteroides fragilis 638R] Length = 845 Score = 35.9 bits (81), Expect = 9.1, Method: Composition-based stats. Identities = 20/240 (8%), Positives = 64/240 (26%), Gaps = 5/240 (2%) Query: 7 LNCLGGLFDWDNAVQRLSFLNTKTED-PHLWQNV--IEAKMLMRERQHLDNAISFIKEIQ 63 ++ L F+ R + + + L Q+ E + +M++ +L++ ++ + + Sbjct: 404 ISGLMERFNLSEIQAR-AIVEMRLRQLTGLMQDQLHAEYEEVMKQIAYLESILADDEVCR 462 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + D L+ + ++ S + +S+ + + ++ E A Sbjct: 463 KVIKDELLEVRAKYGDERRSEIVYSSEEFNPEDFYADDQMIITISHMGYIKRTPLTEFRA 522 Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183 G + + + I + Sbjct: 523 QNRGGVGSKGTETRDEDFVEHIYPATMHNTMMFFTQKGKC-YWLKVYEIPEGTKNSKGRA 581 Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243 Q + + ++ R + ++ ++ Y G + Sbjct: 582 IQNLLNIDSDDAVNAYLRVKSLNDQEYINSHYVLFCTKNGVIKKTSLEQYSRPRQNGVNA 641 >gi|282911086|ref|ZP_06318888.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282324781|gb|EFB55091.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus WBG10049] gi|312438084|gb|ADQ77155.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus TCH60] Length = 402 Score = 35.9 bits (81), Expect = 9.2, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 45/129 (34%), Gaps = 10/129 (7%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + L +G + L+ K DP++ ++ K L E+ L Sbjct: 21 ELKQSLGMIG-----QQLKNKNDELSQKATDPNI--DMEYIKQLETEKAGLQ---QRFNI 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ ++ D + +++ + + + Y+ E S +A + Sbjct: 71 VERQVQDIEEKEKAKVKDKGEAYQSLSDNEKMVKAKAEFYRHAILPNEFEKPSMEAQRLL 130 Query: 122 HAGAGGTES 130 HA G +S Sbjct: 131 HALPTGNDS 139 >gi|304405167|ref|ZP_07386827.1| ABC transporter related protein [Paenibacillus curdlanolyticus YK9] gi|304346046|gb|EFM11880.1| ABC transporter related protein [Paenibacillus curdlanolyticus YK9] Length = 645 Score = 35.9 bits (81), Expect = 9.4, Method: Composition-based stats. Identities = 8/63 (12%), Positives = 23/63 (36%), Gaps = 6/63 (9%) Query: 4 SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKML----MRERQHLDNAISFI 59 R+L L G + + ++ L DP ++ + + + + ++ L Sbjct: 583 QRKLEQLEG--EIARLEEEIAALELALTDPSVFNDYVRIQSIQGDVASKKAELAAVYEQW 640 Query: 60 KEI 62 + + Sbjct: 641 EGL 643 >gi|120436643|ref|YP_862329.1| putative ABC transporter ATP-binding protein [Gramella forsetii KT0803] gi|117578793|emb|CAL67262.1| ABC-type transporter ATP-binding protein [Gramella forsetii KT0803] Length = 563 Score = 35.9 bits (81), Expect = 9.4, Method: Composition-based stats. Identities = 6/45 (13%), Positives = 19/45 (42%) Query: 19 AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 + + +N P ++++ + + LM ++ L + I + Sbjct: 104 ILDEYNKINDMFGLPEVYEDADKMQKLMDKQAELQDKIDASNAWE 148 >gi|254804931|ref|YP_003083152.1| ABC transporter ATP-binding protein [Neisseria meningitidis alpha14] gi|254668473|emb|CBA05763.1| ABC transporter ATP-binding protein [Neisseria meningitidis alpha14] Length = 636 Score = 35.9 bits (81), Expect = 9.5, Method: Composition-based stats. Identities = 5/57 (8%), Positives = 22/57 (38%), Gaps = 4/57 (7%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLC 67 + + +N + DP ++++ +A L + ++ + + ++ + Sbjct: 576 EIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLETKQN 632 >gi|229097020|ref|ZP_04227988.1| hypothetical protein bcere0020_22660 [Bacillus cereus Rock3-29] gi|228686416|gb|EEL40326.1| hypothetical protein bcere0020_22660 [Bacillus cereus Rock3-29] Length = 561 Score = 35.9 bits (81), Expect = 9.6, Method: Composition-based stats. Identities = 17/148 (11%), Positives = 46/148 (31%), Gaps = 9/148 (6%) Query: 1 MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI- 59 ++L + L D +++ L+ + K +E L N I + Sbjct: 183 VELKTRQKSLKN--DLREIDKKIKTLDIVESMDDFV---RKYKQYRKEYSDLQNEIYELE 237 Query: 60 ---KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND 116 K+ + + + + +E + +D + + K+ + + ++ Sbjct: 238 FIKKQYEKNIENLIEKVEQIKKFNDVEQFYKQLIDYFPNKISKSKDEVQDFYEFMVENRG 297 Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRW 144 AY + E ++ L + Sbjct: 298 AYFTLRIKETIMEIKELKKKLQNTKFKL 325 >gi|255531025|ref|YP_003091397.1| ABC transporter ATP-binding protein [Pedobacter heparinus DSM 2366] gi|255344009|gb|ACU03335.1| ABC transporter related [Pedobacter heparinus DSM 2366] Length = 558 Score = 35.9 bits (81), Expect = 9.6, Method: Composition-based stats. Identities = 6/53 (11%), Positives = 18/53 (33%) Query: 11 GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63 G+ + ++ +N + + + LM + L + I + + Sbjct: 93 EGVAEITAILKEYEEVNEAFGLEENYSDPDKMDKLMARQGELQDKIDAVNAWE 145 >gi|323442647|gb|EGB00275.1| phiSLT ORF387-like protein, putative phage capsid protein [Staphylococcus aureus O46] Length = 402 Score = 35.9 bits (81), Expect = 9.7, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 47/129 (36%), Gaps = 10/129 (7%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61 +L + L +G + L+ K DP++ ++ + K L E+ L Sbjct: 21 ELKQSLGMIG-----QQLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 70 Query: 62 IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121 ++ ++ D + +++ + +++ Y+ E S +A + Sbjct: 71 VERQVKDIEEKEKAKVKDTGEAYQSLSANEKMVKAKAEFYRHAILPNEFEKPSMEAQRLL 130 Query: 122 HAGAGGTES 130 HA G +S Sbjct: 131 HALPTGNDS 139 >gi|294648697|ref|ZP_06726157.1| ABC superfamily ATP binding cassette transporter, ABC protein [Acinetobacter haemolyticus ATCC 19194] gi|292825372|gb|EFF84115.1| ABC superfamily ATP binding cassette transporter, ABC protein [Acinetobacter haemolyticus ATCC 19194] Length = 642 Score = 35.9 bits (81), Expect = 9.7, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 25/74 (33%), Gaps = 5/74 (6%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLMRERQHLDNAISFIK 60 L + + + + RL + D L+ + LM E+ L N + + Sbjct: 566 LRKNIEKVEA--QIEKIQPRLVDIEHALADSALYEANRKDDLIKLMNEQSELKNKLEQYE 623 Query: 61 E-IQDRLCDNLILL 73 E + + + L Sbjct: 624 EQLLTFMMELEELE 637 >gi|226952835|ref|ZP_03823299.1| ABC transporter ATP-binding protein [Acinetobacter sp. ATCC 27244] gi|226836456|gb|EEH68839.1| ABC transporter ATP-binding protein [Acinetobacter sp. ATCC 27244] Length = 642 Score = 35.9 bits (81), Expect = 9.7, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 25/74 (33%), Gaps = 5/74 (6%) Query: 3 LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLMRERQHLDNAISFIK 60 L + + + + RL + D L+ + LM E+ L N + + Sbjct: 566 LRKNIEKVEA--QIEKIQPRLVDIEHALADSALYEANRKDDLIKLMNEQSELKNKLEQYE 623 Query: 61 E-IQDRLCDNLILL 73 E + + + L Sbjct: 624 EQLLTFMMELEELE 637 >gi|270296241|ref|ZP_06202441.1| ATP-dependent chaperone ClpB [Bacteroides sp. D20] gi|270273645|gb|EFA19507.1| ATP-dependent chaperone ClpB [Bacteroides sp. D20] Length = 864 Score = 35.9 bits (81), Expect = 9.8, Method: Composition-based stats. Identities = 14/133 (10%), Positives = 38/133 (28%), Gaps = 12/133 (9%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK-----------EIQ 63 + D +++ L + E + + + + +E L + K +IQ Sbjct: 409 ELDEISRKIKQLEIEREAIKRENDKPKLEQIGKELAELKEQENSYKAKWQSEKTLVNKIQ 468 Query: 64 DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123 + L A + + ++ KL+ ++ E + + Sbjct: 469 QNKVEIENLKFEADKAEREGDYG-RVAEIRYGKLQALNQEIEETQQKLHEMQGDKAMIKE 527 Query: 124 GAGGTESQDWANM 136 + D + Sbjct: 528 EVDAEDIADVVSR 540 >gi|153853246|ref|ZP_01994655.1| hypothetical protein DORLON_00640 [Dorea longicatena DSM 13814] gi|149754032|gb|EDM63963.1| hypothetical protein DORLON_00640 [Dorea longicatena DSM 13814] Length = 644 Score = 35.9 bits (81), Expect = 9.8, Method: Composition-based stats. Identities = 8/69 (11%), Positives = 25/69 (36%), Gaps = 7/69 (10%) Query: 2 KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL-DNAISFIK 60 +L + +G R S ++ ++ N ++ + L +E+ + + Sbjct: 582 ELKKTEERIG------ELEDRDSEIDALMIQEDIFTNSVKCQELAKEKAAIAEELEELYM 635 Query: 61 EIQDRLCDN 69 + ++ D Sbjct: 636 KWEELAEDA 644 >gi|261405688|ref|YP_003241929.1| ABC transporter-like protein [Paenibacillus sp. Y412MC10] gi|261282151|gb|ACX64122.1| ABC transporter related protein [Paenibacillus sp. Y412MC10] Length = 653 Score = 35.9 bits (81), Expect = 9.9, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 14/43 (32%) Query: 12 GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN 54 GL ++ L + DP + N ++R L Sbjct: 90 GLIHLKEYRAEMTELEKRMSDPGIAGNAELLDRVLRRYSALQE 132 >gi|319400709|gb|EFV88931.1| ABC transporter family protein [Staphylococcus epidermidis FRI909] Length = 644 Score = 35.9 bits (81), Expect = 9.9, Method: Composition-based stats. Identities = 6/55 (10%), Positives = 24/55 (43%), Gaps = 4/55 (7%) Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQH----LDNAISFIKEIQDRL 66 + +S + + P ++ + ++A ++ L+ + +++Q++L Sbjct: 590 IEELESAISHIEEQLTQPEVFNDPLKASKFANQKSETEQKLEQIMLEWEKLQEKL 644 >gi|311693117|gb|ADP95990.1| ABC transporter ATP-binding protein-like protein [marine bacterium HP15] Length = 647 Score = 35.9 bits (81), Expect = 9.9, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 6/47 (12%) Query: 15 DWDNAVQRLSFLNTKTEDPHLWQN--VIEAKMLMRER----QHLDNA 55 + D Q+LS L + DP L+ + K L+ E+ L+ Sbjct: 581 EMDQLQQKLSALEEQLSDPDLYDDSGKTRLKELLAEQATATARLEEV 627 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.316 0.123 0.333 Lambda K H 0.267 0.0374 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,365,920,070 Number of Sequences: 14124377 Number of extensions: 123783109 Number of successful extensions: 646771 Number of sequences better than 10.0: 7770 Number of HSP's better than 10.0 without gapping: 5291 Number of HSP's successfully gapped in prelim test: 2479 Number of HSP's that attempted gapping in prelim test: 620512 Number of HSP's gapped (non-prelim): 15220 length of query: 355 length of database: 4,842,793,630 effective HSP length: 140 effective length of query: 215 effective length of database: 2,865,380,850 effective search space: 616056882750 effective search space used: 616056882750 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 81 (35.9 bits)