BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780753|ref|YP_003065166.1| peptide chain release factor 2
[Candidatus Liberibacter asiaticus str. psy62]
         (355 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|317130277|ref|YP_004096559.1| hypothetical protein Bcell_3587 [Bacillus cellulosilyticus DSM
           2522]
 gi|315475225|gb|ADU31828.1| hypothetical protein Bcell_3587 [Bacillus cellulosilyticus DSM
           2522]
          Length = 366

 Score =  311 bits (797), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 172/352 (48%), Positives = 232/352 (65%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++++LN   G  D +    R++ L     DP  W N   A+ ++ E   L   +   +E+
Sbjct: 13  MAKRLNDFRGSLDLEEKETRIAELEELMSDPSFWDNQDNAQKIISENNALKEMVDTYREL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D  +  EL  EE D  +  +    ++ +  +    + + LLS   D N+A LE+H
Sbjct: 73  EAEQEDLDVSYELVKEEGDEELAADLHAGIKELGKKFNDFELQLLLSEPYDKNNAILELH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+MLLRMY RWA+ + FK E L+   G+EAG+KS TL+I G NAYG+LK
Sbjct: 133 PGAGGTESQDWASMLLRMYQRWADDKGFKVETLDYLPGDEAGVKSVTLMISGHNAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DS+ RRHTSF S  V P +DD++EIEIS    +IDTYRASGAGGQH
Sbjct: 193 AEKGVHRLVRISPFDSSGRRHTSFVSCEVMPELDDNVEIEISPDQLKIDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +NTTDSAVRITH+PT  VV CQ ERSQ KN+ QA  ML+AKL++LE++++++  +     
Sbjct: 253 INTTDSAVRITHLPTNTVVTCQSERSQIKNREQAMKMLKAKLFQLEIERQQQELDEIRGE 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +++IGWG QIRSYV  PY MVKD RTN E  +   V+DG+LD F+ A L  K
Sbjct: 313 QSDIGWGSQIRSYVFHPYNMVKDHRTNYETGNTQSVMDGELDPFIDAYLRSK 364


>gi|261420549|ref|YP_003254231.1| hypothetical protein GYMC61_3194 [Geobacillus sp. Y412MC61]
 gi|297531361|ref|YP_003672636.1| hypothetical protein GC56T3_3133 [Geobacillus sp. C56-T3]
 gi|319768218|ref|YP_004133719.1| hypothetical protein GYMC52_3223 [Geobacillus sp. Y412MC52]
 gi|261377006|gb|ACX79749.1| hypothetical protein GYMC61_3194 [Geobacillus sp. Y412MC61]
 gi|297254613|gb|ADI28059.1| hypothetical protein GC56T3_3133 [Geobacillus sp. C56-T3]
 gi|317113084|gb|ADU95576.1| hypothetical protein GYMC52_3223 [Geobacillus sp. Y412MC52]
          Length = 367

 Score =  304 bits (778), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 175/353 (49%), Positives = 238/353 (67%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L  + G  D +    R+  L  +   P+ W +   A+ ++ E   L + +     
Sbjct: 13  KMAKRLAEIRGSLDLEAKQARIRELEEQMAAPNFWDDQKAAQAVISEVNALKDLVEEFSS 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +++R  +  +  EL  EE D  +  E  +  +++  +    + + LL+   D N+A LE+
Sbjct: 73  LEERFDNLEVTYELLKEEPDDELQAELVEEAKKLMKDFSEFELQLLLNEPYDQNNAILEL 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA+MLLRMYTRWAEK+ FK E L+   GEEAGIKS TLLIKG NAYG+L
Sbjct: 133 HPGAGGTESQDWASMLLRMYTRWAEKKGFKVETLDYLPGEEAGIKSVTLLIKGHNAYGYL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+D++ RRHTSF S  V P +DD+IEIEI   + +IDTYR+SGAGGQ
Sbjct: 193 KAEKGVHRLVRISPFDASGRRHTSFVSCEVVPELDDNIEIEIRPEELKIDTYRSSGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PTG+VV CQ ERSQ KN+ +A NML+AKLY+ +L++++        
Sbjct: 253 HVNTTDSAVRITHLPTGIVVTCQSERSQIKNREKAMNMLKAKLYQKKLEEQQAELAELRG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EIGWG QIRSYV  PY +VKD RTN+E  +   V+DG++D F+ A L  K
Sbjct: 313 EQKEIGWGNQIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDVFIDAYLRAK 365


>gi|83718832|ref|YP_442414.1| peptide chain release factor 2 [Burkholderia thailandensis E264]
 gi|83652657|gb|ABC36720.1| peptide chain release factor 2, programmed [Burkholderia
           thailandensis E264]
          Length = 459

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 180/351 (51%), Positives = 252/351 (71%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L R+   L G  D+D   +RL+ +N + EDP++W +   A+ L RE++ L+  ++ + E+
Sbjct: 108 LRRRAGELRGYLDYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLEGVVTTLTEL 167

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L +LA EE+D   L  T  +  +++  V   +F  + S  AD N+ ++++ 
Sbjct: 168 DNDLRDAQDLFDLAREENDEDTLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQ 227

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+L+
Sbjct: 228 AGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGDYAYGYLR 287

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH
Sbjct: 288 TETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 347

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++L+E EL+KR+   +  ESS
Sbjct: 348 INKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESS 407

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF+ A+L  
Sbjct: 408 KTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTKAVLDGDLDDFISASLKQ 457


>gi|16080582|ref|NP_391409.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|6174964|sp|P28367|RF2_BACSU RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|2331287|gb|AAC97534.1| release factor 2 [Bacillus subtilis]
 gi|2618874|gb|AAC67303.1| putative peptide chain release factor RF-2 [Bacillus subtilis]
 gi|2636055|emb|CAB15546.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
           str. 168]
          Length = 366

 Score =  299 bits (765), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 173/352 (49%), Positives = 232/352 (65%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++ +L    G  D ++   R++ L+ +  DP  W +  +A+ ++ E   L + ++  K++
Sbjct: 13  MASRLADFRGSLDLESKEARIAELDEQMADPEFWNDQQKAQTVINEANGLKDYVNSYKKL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            +   +  +  +L  EE D  +  E    L+ +  E    + + LLS   D N+A LE+H
Sbjct: 73  NESHEELQMTHDLLKEEPDTDLQLELEKELKSLTKEFNEFELQLLLSEPYDKNNAILELH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDW +MLLRMYTRW E+R FK E L+   G+EAGIKS TLLIKG NAYG+LK
Sbjct: 133 PGAGGTESQDWGSMLLRMYTRWGERRGFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DS+ RRHTSF S  V P  +D I+I+I   D ++DTYRASGAGGQH
Sbjct: 193 AEKGVHRLVRISPFDSSGRRHTSFVSCEVMPEFNDEIDIDIRTEDIKVDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT VVV CQ ERSQ KN+ +A  ML+AKLY+  +++++   +     
Sbjct: 253 VNTTDSAVRITHLPTNVVVTCQTERSQIKNRERAMKMLKAKLYQRRIEEQQAELDEIRGE 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + EIGWG QIRSYV  PY MVKD RTN E  +   V+DGD+D F+ A L  K
Sbjct: 313 QKEIGWGSQIRSYVFHPYSMVKDHRTNTEMGNVQAVMDGDIDTFIDAYLRSK 364


>gi|239828320|ref|YP_002950944.1| hypothetical protein GWCH70_3007 [Geobacillus sp. WCH70]
 gi|239808613|gb|ACS25678.1| hypothetical protein GWCH70_3007 [Geobacillus sp. WCH70]
          Length = 367

 Score =  299 bits (764), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 175/353 (49%), Positives = 238/353 (67%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L  + G  D +    R+  L  +   P+ W +   A+ ++ E   L + +   + 
Sbjct: 13  KMAKRLAEIRGSLDLETKQARIRELEEQMAAPNFWDDQKAAQTVINEANALKDLVGEFQS 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +++R  +  +  EL  EE D  + QE     +++  +    + + LL+   D N+A LE+
Sbjct: 73  LEERFENLEVTYELIKEEPDEDLQQELVAEAKKLTKDFSEFELQLLLNEPYDKNNAILEL 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA+MLLRMYTRWAEK+ FK E L+   GEEAG+KS TLLIKG NAYG+L
Sbjct: 133 HPGAGGTESQDWASMLLRMYTRWAEKKGFKVETLDYLPGEEAGVKSVTLLIKGHNAYGYL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+D++ RRHTSF S  V P +DD IEIEI   + ++DTYR+SGAGGQ
Sbjct: 193 KAEKGVHRLVRISPFDASGRRHTSFVSCEVMPEMDDDIEIEIRPEEIKVDTYRSSGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG+VV CQ ERSQ KN+ +A NML+AKLY+ +L++++        
Sbjct: 253 HVNTTDSAVRITHIPTGIVVTCQSERSQIKNREKAMNMLKAKLYQKKLEEQQAELAEIRG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EIGWG QIRSYV  PY +VKD RTN+E  +   V+DG++D F+ A L  K
Sbjct: 313 EQKEIGWGNQIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDIFIDAYLRSK 365


>gi|297583381|ref|YP_003699161.1| hypothetical protein Bsel_1077 [Bacillus selenitireducens MLS10]
 gi|297141838|gb|ADH98595.1| hypothetical protein Bsel_1077 [Bacillus selenitireducens MLS10]
          Length = 366

 Score =  298 bits (763), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 165/352 (46%), Positives = 233/352 (66%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++ +L    G  D D    +++ L  +  DP  W N  EA+ ++ E   L +     +E+
Sbjct: 13  MATRLADFRGSLDLDEKEAQIASLEDRMADPSFWDNQEEAQKVIGEANALKSYAHTYREL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D  +   L  EE+D  ++ +    ++ ++  +   + + LLSG  D+N+A LE+H
Sbjct: 73  EAAHEDLEVQFGLLEEENDPEMMADLEAGIEDLQKRLNQFELQLLLSGPYDANNAILELH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQD+A+MLLRMYTR+AE+  +K E L+   G+EAG+KS TL I G NAYG LK
Sbjct: 133 PGAGGTESQDYASMLLRMYTRFAEQMNWKVETLDYLPGDEAGVKSVTLQITGHNAYGHLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DS+ RRHTSF S  V P +++ IEI++   + RIDT+R+SGAGGQH
Sbjct: 193 AEKGVHRLVRISPFDSSGRRHTSFVSCDVMPELNEDIEIDVKPDELRIDTFRSSGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PT  +V CQ ERSQ KN+ +A  ML+AKL++LE++++ + A+     
Sbjct: 253 VNTTDSAVRMTHLPTNTIVSCQSERSQIKNREKAMKMLKAKLFQLEIERQRQEADEIRGE 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           ++EIGWG QIRSYV  PY MVKD RTN E  +   V+DGDL  F+ A L  +
Sbjct: 313 QSEIGWGSQIRSYVFHPYNMVKDHRTNKETGNTQAVMDGDLMPFIDAYLRSQ 364


>gi|144897340|emb|CAM74204.1| peptide chain release factor 2 [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 372

 Score =  298 bits (762), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 213/352 (60%), Positives = 268/352 (76%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + +  L    +WD+A+ RL  LN + EDP+LW +  +A+ LMRER  LD  +S  +++
Sbjct: 12  IRKSVALLKRHLNWDDALMRLDELNAQAEDPNLWNDGDKAQKLMRERTQLDTQVSGCRKL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D L L+ELA  E D  +  +    L+ +K      + E+LLSGEAD+ND YLE++
Sbjct: 72  EADLDDMLGLIELADAEGDTDVAADAEAQLRALKDLAGKLELETLLSGEADANDCYLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTE+QDWA MLLRMY+RWAE+  +K E +E   GE AGIKSAT+ + G NAYGWLK
Sbjct: 132 SGAGGTEAQDWAEMLLRMYSRWAEQHGYKLEFVEESAGEGAGIKSATIRVVGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DSN+RR TSF+S WVYPVVDD+I+I+I+ESDCRIDTYRASGAGGQH
Sbjct: 192 TEAGVHRLVRISPFDSNARRQTSFASAWVYPVVDDTIDIQINESDCRIDTYRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITHIPTG+ V CQ ERSQH+N+A+AW+MLRA+LYE ELQKRE  A   E +
Sbjct: 252 INKTDSAVRITHIPTGIAVACQTERSQHQNRARAWDMLRARLYEAELQKREAAAQALEDT 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KT+IGWG QIRSYVLQPYQM+KDLRTN+E +    VLDGDLD FM A+LA +
Sbjct: 312 KTDIGWGHQIRSYVLQPYQMIKDLRTNVETSDTQAVLDGDLDMFMAASLASR 363


>gi|145297980|ref|YP_001140821.1| peptide chain release factor 2 [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|166223622|sp|A4SJK1|RF2_AERS4 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|142850752|gb|ABO89073.1| peptide chain release factor 2 [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 365

 Score =  298 bits (762), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 176/351 (50%), Positives = 236/351 (67%), Gaps = 1/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS +   L G FD+D   +RL  +N + E P +W     A+ L +ER  L+N +  I  
Sbjct: 13  ELSERTELLRGYFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERVSLENVVGTIDV 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +     D  +L+ LA+E +D     E       ++ ++   +F  + SG+ D +D Y+++
Sbjct: 73  LTQGAEDVEMLVSLAVEGEDEDTFNEAVAEADVLETKLVDLEFRRMFSGQHDGSDCYIDI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GGTE+QDWANM+LRMY RW +   +K E +E+ DG+ AGIKSAT+   G  A+GWL
Sbjct: 133 QSGSGGTEAQDWANMVLRMYLRWGDAHGYKPELIELSDGDVAGIKSATVKFTGEYAFGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSF S++VYP +DD I+IEI+ +D RID YRASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSGGRRHTSFCSVFVYPEIDDDIDIEINPADLRIDVYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTGVVVQCQ +RSQHKNK Q    L+AKLYELE+QK+       E 
Sbjct: 253 HVNRTESAVRITHIPTGVVVQCQNDRSQHKNKDQCMKQLKAKLYELEIQKQNAEKQALEE 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 313 TKSDIGWGSQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDKFIEASLK 362


>gi|308048394|ref|YP_003911960.1| bacterial peptide chain release factor 2 (bRF-2) [Ferrimonas
           balearica DSM 9799]
 gi|307630584|gb|ADN74886.1| bacterial peptide chain release factor 2 (bRF-2) [Ferrimonas
           balearica DSM 9799]
          Length = 365

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 187/351 (53%), Positives = 245/351 (69%), Gaps = 1/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS +   L G  D+D   +RL  +N + E P +W     A+ L RER +L+  +  I +
Sbjct: 13  ELSERTELLRGYLDYDAKQERLEEVNAELEQPDVWNEPERAQELGRERSNLEAVVKTIND 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LL+LA+EE D    +E    L+ ++ ++E  +F  + SG  D+NDAYL++
Sbjct: 73  LDQGLEDVRELLDLAVEEQDEESFEEAKAELEGLEAQLEKLEFRRMFSGAQDANDAYLDL 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDW N+LLRMY RWAE + FK E +E+ +GE AG+KSAT+ I G  A+GWL
Sbjct: 133 QAGSGGTEAQDWCNILLRMYLRWAEAKGFKAEIIEVSEGEVAGLKSATVKISGEYAFGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP VDD+I+IEI+ +D RID YRASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDNIDIEINPADLRIDVYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTT+SAVRITH+PT  VVQCQ ERSQHKNK QA   L+AKL+ELE+QK+       E 
Sbjct: 253 HVNTTESAVRITHMPTNTVVQCQNERSQHKNKDQAMKQLKAKLFELEMQKQNAEKQAAED 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 313 AKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDRFIEASLK 362


>gi|312109506|ref|YP_003987822.1| peptide chain release factor 2 [Geobacillus sp. Y4.1MC1]
 gi|311214607|gb|ADP73211.1| Peptide chain release factor 2 [Geobacillus sp. Y4.1MC1]
          Length = 367

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 179/353 (50%), Positives = 238/353 (67%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L  + G  D +    R+  L  +  +P  W +   A+ ++ E   L + +   + 
Sbjct: 13  KMAKRLAEIRGSLDLEAKQARIRELEEQMAEPDFWDDQKAAQTVINEANALKDLVGEFQS 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +++R  +  +  EL  EE D  + QE     +R+  +    + + LL+   D N+A LE+
Sbjct: 73  LEERFENLEVTYELIKEEPDEDLQQELVTEAKRLTKDFSEFELQLLLNEPYDKNNAILEL 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA+MLLRMYTRWAEK+ FK E L+   GEEAGIKS TLLIKG NAYG+L
Sbjct: 133 HPGAGGTESQDWASMLLRMYTRWAEKKGFKVETLDYLPGEEAGIKSVTLLIKGHNAYGYL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+D++ RRHTSF S  V P +DD IEIEI   + RIDTYR+SGAGGQ
Sbjct: 193 KAEKGVHRLVRISPFDASGRRHTSFVSCEVIPEMDDDIEIEIRPEEIRIDTYRSSGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG+VV CQ ERSQ KN+ +A NML+AKLY+ +L++++        
Sbjct: 253 HVNTTDSAVRITHIPTGIVVTCQSERSQIKNREKALNMLKAKLYQKKLEEQQAELAEIRG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EIGWG QIRSYV  PY +VKD RTN+E  +   V+DG++D F+ A L  K
Sbjct: 313 EQKEIGWGNQIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDIFIDAYLRSK 365


>gi|119776010|ref|YP_928750.1| peptide chain release factor 2 [Shewanella amazonensis SB2B]
 gi|119768510|gb|ABM01081.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella
           amazonensis SB2B]
          Length = 364

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 181/348 (52%), Positives = 235/348 (67%), Gaps = 1/348 (0%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
             L  LGG+FD+D   +RL  +  + E   +W N   A+ L +ER  L+N +  I  +  
Sbjct: 15  SALCSLGGIFDYDAKKERLEEVTRELESSDVWNNPERAQALGKERASLENVVKTIDTLDS 74

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
            L D   LLELA+EE+D    ++    L  ++  +E  +F  + SG  D +D YL++ +G
Sbjct: 75  GLEDVEGLLELAVEEEDEGTFEDAKAELDELEKSLEDLEFRRMFSGPQDPSDCYLDIQSG 134

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           +GGTE+QDWA M+LRMY RW E   FK E +E+ DG+ AGIKSAT+   G  AYGWL+ E
Sbjct: 135 SGGTEAQDWAEMVLRMYLRWGEAHDFKPELIEVSDGDVAGIKSATIKFTGEYAYGWLRTE 194

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHRLVR SP+DS+ RRHTSF S++VYP +DD IEI+I+ +D RID YRASGAGGQHVN
Sbjct: 195 TGVHRLVRKSPFDSSGRRHTSFCSVFVYPEIDDDIEIDINPADLRIDVYRASGAGGQHVN 254

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T+SAVRITH+PT  VVQCQ +RSQHKNK  A   L+AKLYELELQK+       E +K+
Sbjct: 255 RTESAVRITHLPTNTVVQCQNDRSQHKNKDTAMKQLKAKLYELELQKQNAEKQAAEDAKS 314

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 315 DIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQSVLDGDLDKFIEASLK 361


>gi|291618681|ref|YP_003521423.1| PrfB [Pantoea ananatis LMG 20103]
 gi|291153711|gb|ADD78295.1| PrfB [Pantoea ananatis LMG 20103]
          Length = 430

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 178/344 (51%), Positives = 236/344 (68%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D   +RL  +N + E P +W     A+ L +ER  L+  +    ++   L D 
Sbjct: 86  FGGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTFDQMSQGLEDV 145

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LL+LA+E DD     E    L  ++ ++   +F  + SGE DS D Y+++ AG+GGTE
Sbjct: 146 QGLLDLAVEADDEETFNEAVAELDALEGKLGELEFRRMFSGEYDSADCYIDLQAGSGGTE 205

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA+ML+RMY RWAE + FKTE +E  +GE AGIKS T+ + G  A+GWL+ E GVHR
Sbjct: 206 AQDWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAFGWLRTETGVHR 265

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS  RRHTSFSS ++YP VDD I+I+I+ +D RID YRASGAGGQHVN T+SA
Sbjct: 266 LVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESA 325

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG V QCQ +RSQHKNK QA   ++AKLYELE+QK+     + E +K++IGWG
Sbjct: 326 VRITHVPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQMLEDNKSDIGWG 385

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 386 SQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDRFIEASLKA 428


>gi|220934633|ref|YP_002513532.1| peptide chain release factor 2 [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995943|gb|ACL72545.1| peptide chain release factor 2 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 364

 Score =  296 bits (757), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 186/350 (53%), Positives = 248/350 (70%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +++ L G  D+D   +RL  ++ + EDP++W N  +A+ L RER  L+  +  I  +
Sbjct: 13  LQGRVDALRGYLDYDAKRERLEEVSRELEDPNVWNNPEKAQELGRERSRLEEVVLLISRM 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LL++A EEDD   +     +L   + +V   +F  + SGE D N+AY+++ 
Sbjct: 73  DKALGDTRDLLDMAAEEDDAETVSAVEADLANYENDVAQLEFRRMFSGEMDENNAYMDIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWANMLLRMY RW E+R FKTE +E+ +GE AGIKSAT+  +GP AYGWL+
Sbjct: 133 AGSGGTEAQDWANMLLRMYLRWGERRGFKTELMEVSEGEVAGIKSATIKFEGPYAYGWLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSF++++V P VDDSIEIEI+ +D R+DTYRASGAGGQH
Sbjct: 193 TETGVHRLVRKSPFDSGNRRHTSFAAVFVSPEVDDSIEIEINPADLRVDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+RITH+P+GVVV CQ +RSQHKN+  A   L+AKLYELELQK+       E +
Sbjct: 253 VNRTESAIRITHMPSGVVVACQADRSQHKNRDTAMKQLKAKLYELELQKQNAAKQALEDT 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 313 KSDIGWGSQIRSYVLD-QSRIKDLRTGVEVGNTQAVLDGDLDQFIEASLK 361


>gi|117617639|ref|YP_857857.1| peptide chain release factor 2 [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|166223621|sp|A0KNK6|RF2_AERHH RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|117559046|gb|ABK35994.1| peptide chain release factor 2 (programmed frameshift) [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 365

 Score =  296 bits (757), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 175/351 (49%), Positives = 235/351 (66%), Gaps = 1/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+N +  I  
Sbjct: 13  ELSERTELLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERVALENVVGTIDT 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +     D  +L+ELA+E +D     E       ++ ++   +F  + SG+ D +D Y+++
Sbjct: 73  LTQGADDVAMLVELAVEGEDEDTFNEAVAEADVLETKLVDLEFRRMFSGQHDPSDCYIDI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GGTE+QDWANM+LRMY RW +   +K E +E  +G+ AGIKSAT+   G  A+GWL
Sbjct: 133 QSGSGGTEAQDWANMVLRMYLRWGDAHGYKPELIECSEGDVAGIKSATIKFTGEYAFGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSF S++VYP +DD I+IEI+ +D RID YRASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSGGRRHTSFCSVFVYPEIDDDIDIEINPADLRIDVYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTGVVVQCQ +RSQHKNK Q    L+AKLYELE+QK+       E 
Sbjct: 253 HVNRTESAVRITHIPTGVVVQCQNDRSQHKNKDQCMKQLKAKLYELEIQKQNAEKQALEE 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 313 TKSDIGWGSQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDKFIEASLK 362


>gi|220925876|ref|YP_002501178.1| hypothetical protein Mnod_6050 [Methylobacterium nodulans ORS 2060]
 gi|219950483|gb|ACL60875.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
          Length = 375

 Score =  296 bits (757), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 229/351 (65%), Positives = 279/351 (79%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
            + +  L    DWD A +RL+ LN ++EDP LW +   A+ +MRER  L+ A+S I+ ++
Sbjct: 13  KQSIGLLRRHLDWDTADKRLAELNARSEDPALWNDPEAAQKVMRERTQLEEAVSAIRRLE 72

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D   L+EL   E D + ++E  + ++ ++ E   +Q E+LL+GEAD ND YLEVHA
Sbjct: 73  QGLEDAATLIELGEMEGDEASIREGEEQIRAVQAEAARRQIETLLAGEADGNDTYLEVHA 132

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTESQDWANML RMY RWAE+RK+K E +E  +GEEAGIK ATLLIKG NAYGWLK 
Sbjct: 133 GAGGTESQDWANMLHRMYARWAERRKYKVEIVEWSEGEEAGIKGATLLIKGHNAYGWLKT 192

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVRISPYDSN+RRHTSF+S+WVYPV+DD I IE+ ESDCRIDTYR+SGAGGQHV
Sbjct: 193 ESGVHRLVRISPYDSNARRHTSFASVWVYPVIDDRITIEVKESDCRIDTYRSSGAGGQHV 252

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVRITHIPTG+VV CQQERSQHKN+A AWNMLRA+LYELEL+KREE AN   +SK
Sbjct: 253 NTTDSAVRITHIPTGIVVACQQERSQHKNRATAWNMLRARLYELELKKREEKANAEAASK 312

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T+IGWG QIRSYVLQPYQ+VKDLRT  + TSP DVLDG++D F++A+LA +
Sbjct: 313 TDIGWGHQIRSYVLQPYQLVKDLRTGAQSTSPGDVLDGEIDPFIEASLAQR 363


>gi|222056175|ref|YP_002538537.1| hypothetical protein Geob_3093 [Geobacter sp. FRC-32]
 gi|221565464|gb|ACM21436.1| hypothetical protein Geob_3093 [Geobacter sp. FRC-32]
          Length = 370

 Score =  296 bits (757), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 169/350 (48%), Positives = 243/350 (69%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++ ++N L G  D D+  + +  L ++   P  W +   A+ +++ER  ++  ++    +
Sbjct: 12  MAERINNLRGSLDIDSLREDIQELESRIAAPGFWDDNEAAQKVLKERTVMEKTLASWDRL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             ++ D  +L+EL  E +D + L E  D   +++  +   +F+ +LSG  D++  +  ++
Sbjct: 72  NRQVEDIRVLIELGSEAEDEATLAEVHDLNDQLEKGLVDAEFQKMLSGPHDASSCFFSIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA MLLRMY R+ E++ +KTE  +   G+EAG+K  T  + G  AYG+LK
Sbjct: 132 SGAGGTESQDWAEMLLRMYLRYCERKGWKTEITDYQSGDEAGVKGVTFSVSGEYAYGYLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVRISP+DSN+RRHTSF+S++V+P ++D I+++I E+D R+DT+R+SGAGGQH
Sbjct: 192 AEVGIHRLVRISPFDSNARRHTSFASVFVFPEIEDDIDVKIVETDLRVDTFRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSA+RITHIPTG+VV CQ ERSQH N+A A  +LRAKLYE ELQ+RE  A      
Sbjct: 252 VNTTDSAIRITHIPTGIVVACQTERSQHMNRATAMRVLRAKLYERELQERESQAAEIAGE 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K EIGWG QIRSYVL PY+MVKDLRT +E  +P  VLDG+L+ F+ A L 
Sbjct: 312 KKEIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGELEQFIIAFLM 361


>gi|312115773|ref|YP_004013369.1| peptide chain release factor 2 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220902|gb|ADP72270.1| Peptide chain release factor 2 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 376

 Score =  295 bits (754), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 225/353 (63%), Positives = 278/353 (78%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L+ L    DWD A  RL+ LN   EDP LW N   A+ L+RERQHLD A++   +
Sbjct: 11  EIKQSLSLLRRYLDWDKAKIRLANLNEIVEDPTLWDNPQRAQKLLRERQHLDTALTAYSQ 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  RL D + L+EL  EE D  +++E   +L  ++ EV+ ++ E+LLSGEAD ND +LEV
Sbjct: 71  LAARLDDAVGLIELGEEESDEEVVKEAEASLAVLQTEVQKREVEALLSGEADGNDTFLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDW  MLLRMY RWAE++ +K E +E   GEEAG+KSAT+ +KG NA+GWL
Sbjct: 131 HAGAGGTESQDWTEMLLRMYMRWAEEQGYKVELIESAAGEEAGLKSATIQVKGSNAFGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDSN+RRHTSF+S+WVYPVVDD+I+I ++ESDCRIDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFASVWVYPVVDDTIDIAVNESDCRIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PTG+VVQCQ ERSQHKN+A AWNML+A+LYE EL+KRE+ A+   +
Sbjct: 251 HVNTTDSAVRITHVPTGIVVQCQMERSQHKNRATAWNMLKARLYEQELKKREDAAHAAAA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           SKT+IGWG QIRSYVLQPYQMVKDLRT I  T+P  VLDGDL  F++A LA +
Sbjct: 311 SKTDIGWGHQIRSYVLQPYQMVKDLRTGIVNTNPPAVLDGDLTAFIEAALAQR 363


>gi|319789223|ref|YP_004150856.1| hypothetical protein Theam_0242 [Thermovibrio ammonificans HB-1]
 gi|317113725|gb|ADU96215.1| hypothetical protein Theam_0242 [Thermovibrio ammonificans HB-1]
          Length = 373

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 183/353 (51%), Positives = 244/353 (69%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL  +   + G FD D   +RLS +  +   P  W +  +A+ L  ER HL+  +   K 
Sbjct: 14  KLKEKYAEIRGYFDLDKMKRRLSEIEEEMASPDFWNDPKKAQSLSVERNHLEQELEAFKS 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ ++ D+ +L+E+A EE D S+L E    L  +   ++  + + +LSGE D N+A + +
Sbjct: 74  VEQKIEDSEVLIEMAEEEQDGSLLDEAEQMLSDLDKTLDRLEVKKVLSGEFDKNNAIVTI 133

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTES DWA ML+RMY RWAE++ F+ E L++ + EEAGIKSATLLIKGP AYG+L
Sbjct: 134 HAGAGGTESCDWAQMLMRMYIRWAERKGFEVEILDLQENEEAGIKSATLLIKGPYAYGFL 193

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E G HRLVRISP+D+N+RRHTSF  + V P +D+ IE+EI E D RIDTYRASGAGGQ
Sbjct: 194 RAEHGTHRLVRISPFDANARRHTSFCGVIVVPEIDEDIEVEIKEEDLRIDTYRASGAGGQ 253

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITHIPTG+VV CQ ERSQ +N+ +A  +L+A+LYELE QKREE       
Sbjct: 254 HVNKTDSAVRITHIPTGIVVTCQSERSQIQNRQRAMKILKARLYELERQKREEKIAQARG 313

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               I WG QIRSY+ QPY++VKD RT +E ++   V+DGD+D F++A L  K
Sbjct: 314 EHKSIAWGNQIRSYIFQPYRLVKDHRTGVETSNIDAVMDGDIDLFIEAYLKQK 366


>gi|332288942|ref|YP_004419794.1| peptide chain release factor 2 [Gallibacterium anatis UMN179]
 gi|330431838|gb|AEC16897.1| peptide chain release factor 2 [Gallibacterium anatis UMN179]
          Length = 351

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 184/344 (53%), Positives = 247/344 (71%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+DN V+RL  ++ + E P +W +  +A+ L +ER  L+  ++ IK +Q  L D 
Sbjct: 7   LGGIFDFDNKVERLEEVSAELEQPDVWNDPEKAQALGKERSSLEAVVNTIKSLQQGLDDV 66

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+E DD +   E    L +++  +   +F  + SG  D+ D Y+++ AG+GGTE
Sbjct: 67  DGLLELAIEADDQATFDEAVAELDQLEQSLAKLEFRRMFSGANDAADCYVDLQAGSGGTE 126

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW  MLLRMY RWAE + FK E +E+ DG+ AGIKSAT+ + G  A+GWL+ E G+HR
Sbjct: 127 AQDWTEMLLRMYLRWAESKGFKAELMEVSDGDVAGIKSATIRVSGEYAFGWLRTETGIHR 186

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DSN+RRHTSFS+++VYP ++D I+IEI+ +D RID YRASGAGGQHVN T+SA
Sbjct: 187 LVRKSPFDSNNRRHTSFSAVFVYPEINDDIDIEINPADLRIDVYRASGAGGQHVNRTESA 246

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VVQCQ +RSQHKNK QA   L+AKLYELEL+K+       E SK++IGWG
Sbjct: 247 VRITHMPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELKKKNAEKQALEESKSDIGWG 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 307 SQIRSYVLDD-ARIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 349


>gi|217974576|ref|YP_002359327.1| hypothetical protein Sbal223_3420 [Shewanella baltica OS223]
 gi|254790920|sp|B8E5Q1|RF2_SHEB2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|217499711|gb|ACK47904.1| hypothetical protein Sbal223_3420 [Shewanella baltica OS223]
          Length = 365

 Score =  294 bits (752), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 174/351 (49%), Positives = 236/351 (67%), Gaps = 1/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ +   L G+FD+D   +RL  +  + E   +W +   A+ L +ER  L+  +  I +
Sbjct: 13  ELAERTQLLRGIFDYDAKNERLEEVTRELESSEVWNDPERAQALGKERASLEAVVKTIDD 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+EE+D     ETS  L  ++  +   +F  + SG  D+++ YL++
Sbjct: 73  MDSGLEDVEGLLELAIEEEDEDTFNETSKELDYLESRLADLEFRRMFSGPQDASNCYLDI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GGTE+QDWANM+LRMY RW E   F  E +E+ DG+ AGIK AT+   G  A+GWL
Sbjct: 133 QSGSGGTEAQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS+ RRHTSF S++VYP +DD I I+I+ SD RIDTYRASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPSDLRIDTYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SA+RITH+PT  VVQCQ +RSQHKNK  A   L+AKL+ELE+ K+       E 
Sbjct: 253 HVNKTESAIRITHLPTNTVVQCQNDRSQHKNKDAAMKQLKAKLFELEMLKQNADKQAAED 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 313 AKSDIGWGSQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDKFIEASLK 362


>gi|217976907|ref|YP_002361054.1| hypothetical protein Msil_0721 [Methylocella silvestris BL2]
 gi|217502283|gb|ACK49692.1| conserved hypothetical protein [Methylocella silvestris BL2]
          Length = 376

 Score =  294 bits (752), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 216/352 (61%), Positives = 268/352 (76%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + +  L    D   A +RL+ LN K EDP+LW +   A+ +MRER  L++ +  +   
Sbjct: 12  IKQSMGLLRRHLDVATAERRLAELNAKVEDPNLWDDADAAQKIMRERTDLEDRLGSLARF 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D + L+ELA  E+D +  +E    L+ +KLE E +Q E+LLSGE D ND Y+EVH
Sbjct: 72  DSELDDAVTLVELAEAEEDTATEKEAIGQLKSLKLEAERRQIEALLSGEVDGNDTYIEVH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTES DWA ML RMY RWAE+ KFK E +E   G+EAG+KS TLL+KG NA+GW K
Sbjct: 132 SGAGGTESCDWARMLFRMYARWAERHKFKVEVIEETAGDEAGLKSGTLLVKGHNAHGWAK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DSN+RRHTSF+S+WVYPV+DD I+I++ ESDCRIDTYR+SGAGGQH
Sbjct: 192 TESGVHRLVRISPFDSNARRHTSFASVWVYPVIDDKIDIDVKESDCRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIP+G+VV CQ ERSQHKN+A AWNMLRA+LYE E++KRE  AN  E+S
Sbjct: 252 VNTTDSAVRITHIPSGIVVACQGERSQHKNRATAWNMLRARLYEQEIEKREAAANATEAS 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KTEIGWG QIRSYVLQPYQ+VKDLR+ +   +P DVLDGDLD FM+A LA +
Sbjct: 312 KTEIGWGHQIRSYVLQPYQLVKDLRSGVTSGTPDDVLDGDLDSFMEAALAQR 363


>gi|253687049|ref|YP_003016239.1| hypothetical protein PC1_0648 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259585229|sp|C6D8Z5|RF2_PECCP RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|251753627|gb|ACT11703.1| hypothetical protein PC1_0648 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 365

 Score =  294 bits (752), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 184/351 (52%), Positives = 240/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++
Sbjct: 14  LSERSAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTIDQL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+EEDD     +T+  L  ++ ++   +F  + SG+ DS D YL++ 
Sbjct: 74  TQGLEDVAGLLELAVEEDDEDTFNDTTVELDALENKLGQLEFRRMFSGQYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E  DG+ AG KSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTKSATIKIIGDYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP V+D I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVEDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+PTG+V QCQ +RSQHKNK QA   L+AKLYE E+QK+       E +
Sbjct: 254 VNRTESAVRITHMPTGIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363


>gi|197105302|ref|YP_002130679.1| peptide chain release factor 2 [Phenylobacterium zucineum HLK1]
 gi|238690157|sp|B4RCR3|RF2_PHEZH RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|196478722|gb|ACG78250.1| peptide chain release factor 2 [Phenylobacterium zucineum HLK1]
          Length = 369

 Score =  294 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 212/351 (60%), Positives = 258/351 (73%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           S + NC GG+FDW+ A+++L  LN + EDP LW +  EA+ + RER  L   +  +  ++
Sbjct: 10  SSRSNCSGGVFDWEPALRKLDELNARVEDPTLWNDPDEAQAVSRERSRLSAQVEAVHGLE 69

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D L   ELA EE D + L E    L+ IK      + E+LLSGEAD NDAY+E+++
Sbjct: 70  RDLADALGYAELADEEGDEASLDEARAQLREIKERAARAELEALLSGEADGNDAYVEINS 129

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTES DWA MLLRMYTRWA+      + +E   GE+AGIKS TL +KG NAYGWLK 
Sbjct: 130 GAGGTESNDWAGMLLRMYTRWAQAHGMSVDVIEETAGEQAGIKSVTLQVKGTNAYGWLKT 189

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVRISPYDS++RRHTSF+S+WVYPV+DD+IEIEI+ +D R DTYRASGAGGQHV
Sbjct: 190 EAGVHRLVRISPYDSSARRHTSFASVWVYPVIDDNIEIEINPADVRTDTYRASGAGGQHV 249

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N TDSAVR+THIPTG+ V CQ +RSQH+N+ QAW MLRA+LYELEL+KRE      E  K
Sbjct: 250 NKTDSAVRLTHIPTGIAVACQTQRSQHQNRDQAWKMLRARLYELELEKREAAQQALEDQK 309

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T+IGWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD FM A LA +
Sbjct: 310 TDIGWGHQIRSYVLQPYQMVKDLRTEVETSDTQGVLDGDLDAFMGAALAQR 360


>gi|330839015|ref|YP_004413595.1| Peptide chain release factor 2 [Selenomonas sputigena ATCC 35185]
 gi|329746779|gb|AEC00136.1| Peptide chain release factor 2 [Selenomonas sputigena ATCC 35185]
          Length = 368

 Score =  294 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 180/352 (51%), Positives = 239/352 (67%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +L  +G   D     ++++ L  K  +P  W N  EA+ + +E   +  ++   KEI
Sbjct: 12  MQAKLKEMGDSLDVARKEEKIAELEYKMGEPTFWDNAEEAQKINQELAAIKGSVDKYKEI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D   LLE+ALEE+D S+  E     + IK  V   + E LLSG  D+N+A L +H
Sbjct: 72  VSKTDDAQALLEMALEENDTSLEPEVQTEFETIKTAVRELELEVLLSGPYDANNAILTLH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDW  MLLRMY RWAE+  F     ++  G+EAG+KSATL I G NAYG+LK
Sbjct: 132 AGAGGTEAQDWTQMLLRMYGRWAERHGFSVVTADLLPGDEAGVKSATLFINGHNAYGYLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DSN+RRHTSFS+  + P +DD++E+ I+ +D R+DTYRASGAGGQH
Sbjct: 192 SEKGVHRLVRISPFDSNARRHTSFSACDIMPEIDDAVEVAINMADVRVDTYRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T SAVR+TH+PTG+VVQCQ ERSQ +N+ Q   MLRAKL+ELE +K+E      E  
Sbjct: 252 INKTSSAVRMTHMPTGIVVQCQNERSQLQNREQCMKMLRAKLFELEQEKKEAEIQKLEGD 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + +I WG QIRSYV QPY MVKD+RT +E  +   V+DGDLD F++A LA K
Sbjct: 312 QQKIEWGSQIRSYVFQPYTMVKDMRTGMETGNVQAVMDGDLDAFIEAFLAAK 363


>gi|50119718|ref|YP_048885.1| peptide chain release factor 2 [Pectobacterium atrosepticum
           SCRI1043]
 gi|81646129|sp|Q6D946|RF2_ERWCT RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|49610244|emb|CAG73687.1| putative peptide chain release factor 2 [Pectobacterium
           atrosepticum SCRI1043]
          Length = 365

 Score =  293 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 186/351 (52%), Positives = 240/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++
Sbjct: 14  LAERSAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTIDQL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+EEDD     ETS  L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  AQGLEDVTGLLELAVEEDDEDTFNETSAELDVLENKLGQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E  DG+ AG KSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTKSATIKIIGDYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+PT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E +
Sbjct: 254 VNRTESAVRITHLPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQVMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363


>gi|329850508|ref|ZP_08265353.1| peptide chain release factor 2 [Asticcacaulis biprosthecum C19]
 gi|328840823|gb|EGF90394.1| peptide chain release factor 2 [Asticcacaulis biprosthecum C19]
          Length = 358

 Score =  293 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 206/348 (59%), Positives = 256/348 (73%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           ++C GG+FDWD A++RL  LN + EDP LW    EA+ + RER  L  +I  ++ ++  L
Sbjct: 1   MDCSGGVFDWDVALRRLDELNARVEDPTLWDKPDEAQKINRERSKLSASIEAVRTLEKEL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D +   EL   E D S+++E+   L+ +K      + E+LLSGEAD NDAY+E+++GAG
Sbjct: 61  KDAVEFAELGDMEGDESLIEESRAMLKGLKAHAGRAELEALLSGEADGNDAYVEINSGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTES DWA +L+RMYTRWA       E  E   GE+AGIKS TL+IKG NAYGWLK E G
Sbjct: 121 GTESCDWAGILMRMYTRWATAHGMTVEVEEETSGEQAGIKSTTLMIKGENAYGWLKTEAG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+DS++RRHTSF+S+WVYPVVDD+I I+I+ +D R DTYRASGAGGQH+N T
Sbjct: 181 VHRLVRISPFDSSARRHTSFASVWVYPVVDDTIVIDINPADVRTDTYRASGAGGQHINKT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVR+THIPTG+ V CQ  RSQH N+ +AW MLRA+LYE ELQKRE      E  KT+I
Sbjct: 241 DSAVRLTHIPTGIAVACQAGRSQHANRDEAWKMLRARLYEQELQKREAAQQALEDQKTDI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           GWG QIRSYVLQPYQMVKDLRTN+E +    VLDGDLD FM A+LA +
Sbjct: 301 GWGHQIRSYVLQPYQMVKDLRTNVETSDSQGVLDGDLDAFMGASLAQR 348


>gi|269103439|ref|ZP_06156136.1| peptide chain release factor 2 [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163337|gb|EEZ41833.1| peptide chain release factor 2 [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 347

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 181/344 (52%), Positives = 240/344 (69%), Gaps = 1/344 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGG+FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++   + D
Sbjct: 2   SLGGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERASLEAVVETIDQLDQGVDD 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              LLELA+E +D     E    L  ++ ++   +F  + SG+ D +D YL++ AG+GGT
Sbjct: 62  VEGLLELAVEAEDQETFDEIEPELAELEAKLAKLEFRRMFSGDHDGSDCYLDLQAGSGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDW +M+LRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G  AYGWL+ E GVH
Sbjct: 122 EAQDWTSMMLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATIRISGEYAYGWLRTETGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DS  RRHTSF+S +VYP VDD+I+I+I+ SD RID YRASGAGGQHVNTT+S
Sbjct: 182 RLVRKSPFDSGGRRHTSFASAFVYPEVDDNIDIDINPSDLRIDVYRASGAGGQHVNTTES 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITHIPT  VVQCQ +RSQHKNK QA   L+AKL+ELE+QK+       E SK++IGW
Sbjct: 242 AVRITHIPTNTVVQCQNDRSQHKNKDQAMKQLKAKLFELEMQKQNAEKQANEDSKSDIGW 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 302 GSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLK 344


>gi|115352205|ref|YP_774044.1| peptide chain release factor 2 [Burkholderia ambifaria AMMD]
 gi|115282193|gb|ABI87710.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia
           ambifaria AMMD]
          Length = 406

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 179/346 (51%), Positives = 250/346 (72%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD+D    RL+ +N + EDP++W +   A+ L RE++ L+  ++ +  +   L 
Sbjct: 60  ASFGGIFDYDAKSARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLR 119

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D L L ELA EE D   L  + D+ ++++  V   +F  + S  AD N+ ++++ AGAGG
Sbjct: 120 DALDLFELAREEGDEDTLVASEDDAKKLEARVGDIEFRRMFSNPADPNNCFIDIQAGAGG 179

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+L+ E G+
Sbjct: 180 TEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGFLRTETGI 239

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+E++ +D RIDTYRASGAGGQH+N TD
Sbjct: 240 HRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPADLRIDTYRASGAGGQHINKTD 299

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE E++KR+   +  ESSKT++G
Sbjct: 300 SAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEMRKRQAEQDKLESSKTDVG 359

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF+ A+L  
Sbjct: 360 WGHQIRSYVLD-QSRVKDLRTNVEMSNTRAVLDGDLDDFISASLKQ 404


>gi|237807749|ref|YP_002892189.1| peptide chain release factor 2 [Tolumonas auensis DSM 9187]
 gi|259585231|sp|C4LCN9|RF2_TOLAT RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|237500010|gb|ACQ92603.1| hypothetical protein Tola_0975 [Tolumonas auensis DSM 9187]
          Length = 365

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 169/351 (48%), Positives = 232/351 (66%), Gaps = 1/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS +   L G  D+D   +RL  ++ + E P +W     A+ L +ER  L++ ++ I  
Sbjct: 13  ELSERTELLRGYLDYDAKKERLEEVSAELEQPEVWNEPERAQALGKERSALESVVATIDV 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +     D  +L+ LA+E +D     E       ++ ++   +F  + SG+ D++D Y+++
Sbjct: 73  LTQGAEDVEMLVSLAVEGEDEETFHEAETEADALEKKLVDLEFRRMFSGQHDASDCYMDI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GGTE+QDWA+M+LRMY RW E   +K E +E  DG+ AGIKSAT+   G  A+GWL
Sbjct: 133 QSGSGGTEAQDWADMVLRMYLRWGEAHGYKPELIECSDGDVAGIKSATIKFTGEYAFGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSF S +VYP +D+ +EIEI+ +D RID YRASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSGGRRHTSFCSAFVYPEIDEDVEIEINPADLRIDVYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPT  V QCQ +RSQHKNK QA   L+AKLYELE+ K+       E 
Sbjct: 253 HVNRTESAVRITHIPTNTVTQCQNDRSQHKNKDQAMKQLKAKLYELEMMKQNAEKQALEE 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 313 TKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQSVLDGDLDKFIEASLK 362


>gi|323340175|ref|ZP_08080439.1| peptide chain release factor RF2 [Lactobacillus ruminis ATCC 25644]
 gi|323092366|gb|EFZ34974.1| peptide chain release factor RF2 [Lactobacillus ruminis ATCC 25644]
          Length = 358

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 167/348 (47%), Positives = 234/348 (67%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           +   LGGLFD D   + ++   +K  DP  W N  EA+ ++ E   L N      ++++ 
Sbjct: 3   RSRTLGGLFDLDGLQEAIADNESKMADPDFWNNQEEAQKVINENNELKNKYDNFNQLEEA 62

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + D  +LLE+  E+DD  ++ E S+  +  + +++  Q   LL+G+ D ++A LE+H GA
Sbjct: 63  IEDLEVLLEMVQEDDDDELVSELSEKFELAQKKMQEYQLSLLLNGKYDKDNAILELHPGA 122

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTESQDW +MLLRMYTRWAE+  F  E  +   G+EAGIKS TL I G NAYG+L+ E+
Sbjct: 123 GGTESQDWGSMLLRMYTRWAEQHGFSVETDDYQAGDEAGIKSVTLTISGHNAYGYLRSEK 182

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVRISP+DS  RRHTSF S+ V P +DD +E+++   D +++ +R+SGAGGQH+N 
Sbjct: 183 GVHRLVRISPFDSAGRRHTSFCSVNVMPELDDDVEVDLRPEDIKMEVFRSSGAGGQHINK 242

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T SAVR+ HIPTG+VV  Q +RSQ +N+A A  MLR+KLY++EL+++E+     +  + +
Sbjct: 243 TSSAVRLIHIPTGIVVSSQAQRSQFQNRATAEKMLRSKLYQMELEEQEKKRAAIQGEQLD 302

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IGWG QIRSYV  PY MVKD RTN E  + S V+DGDLD F+ A L  
Sbjct: 303 IGWGSQIRSYVFHPYSMVKDHRTNYETGNISSVMDGDLDGFINAYLQW 350


>gi|255659162|ref|ZP_05404571.1| peptide chain release factor 2 [Mitsuokella multacida DSM 20544]
 gi|260848613|gb|EEX68620.1| peptide chain release factor 2 [Mitsuokella multacida DSM 20544]
          Length = 368

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 170/353 (48%), Positives = 240/353 (67%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +L+ +G   +     ++++ L  K  +P  W +  +A+ + +E   +  ++   K 
Sbjct: 11  ELKTKLDQMGESLEVPAKEEKIAELEYKMGEPTFWDDAEKAQKINQELNDVKISVDKYKN 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  +  D   L E+ +EE D S+ ++    L  +   +E  Q E LLSG  D+N+A L +
Sbjct: 71  LVAKFEDAQTLWEMGMEEQDESMEEDVKSELAAVAEGLESLQLEVLLSGPYDANNAILTL 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTE+QDW  MLLRMY RWAE+  F  E  ++  G+EAG+KSATL IKG NAYG+L
Sbjct: 131 HAGAGGTEAQDWTQMLLRMYGRWAERHGFTVETADLLPGDEAGVKSATLFIKGHNAYGFL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E+G+HRLVRISP+D+ +RRHTSF++  + P +DD++E+ I+ SD R+DTYRASGAGGQ
Sbjct: 191 RSEKGIHRLVRISPFDAQARRHTSFAACDIMPEIDDNVEVNINMSDVRVDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N T SAVR+TH+PTG+VVQCQ ERSQ +N+ Q   MLRAKL+ELE++K+E      E 
Sbjct: 251 HINKTSSAVRMTHMPTGIVVQCQNERSQLQNREQCLKMLRAKLFELEMEKKEAELAKLEG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + +I WG QIRSYV QPY MVKD RTN+E  +   V+DGD+D F++A LA K
Sbjct: 311 DQQKIEWGSQIRSYVFQPYTMVKDHRTNVETGNVQAVMDGDIDMFIRAFLAAK 363


>gi|83311912|ref|YP_422176.1| peptide chain release factor 2 [Magnetospirillum magneticum AMB-1]
 gi|123541518|sp|Q2W3F8|RF2_MAGMM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|82946753|dbj|BAE51617.1| Protein chain release factor B [Magnetospirillum magneticum AMB-1]
          Length = 371

 Score =  292 bits (747), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 216/352 (61%), Positives = 263/352 (74%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + R    L    +WD A+ RL  LN   E+P LW +   A+ +MRER  LD+AI   + +
Sbjct: 12  IRRSAALLKRHLNWDEALMRLDELNASAENPDLWNDAGAAQKIMRERNELDSAIQGCRAL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   L+EL   E D +++ +  + ++ +K      + E+LLSGEAD ND Y+E++
Sbjct: 72  ERELADLAELIELGEMEGDQTVIDDAEEQVRALKERAAKMELETLLSGEADHNDCYMEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTESQDWA MLLRMYTRWAEK  +K E LE   GE+AGIKSAT+ I G NAYGWLK
Sbjct: 132 AGAGGTESQDWAEMLLRMYTRWAEKHGYKVEWLEESAGEQAGIKSATIRILGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS WVYPV+DD+I+I+I+ES+CRIDTYRASGAGGQH
Sbjct: 192 TESGVHRLVRISPYDSAARRHTSFSSAWVYPVIDDTIDIQINESECRIDTYRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITHIPTG+ V CQ ERSQH+N+A+AW+MLRA+LYE ELQKRE  A   E  
Sbjct: 252 INKTDSAVRITHIPTGIAVACQMERSQHQNRARAWDMLRARLYEAELQKREAAAQALEDQ 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KT+IGWG QIRSYVLQPYQMVKDLRTN+E +    VLDGDLD FM A+LA +
Sbjct: 312 KTDIGWGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDMFMAASLAAR 363


>gi|46201582|ref|ZP_00208157.1| COG1186: Protein chain release factor B [Magnetospirillum
           magnetotacticum MS-1]
          Length = 371

 Score =  292 bits (747), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 217/352 (61%), Positives = 264/352 (75%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + R    L    +WD A+ RL  LN   E+P LW +   A+ +MRER  LD+AI   + +
Sbjct: 12  IRRSAALLKRHLNWDEALMRLDELNASAENPDLWNDAGAAQKIMRERNDLDSAIQGCRAL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D + L+EL   E D +++ +  + ++ +K      + E+LLSGEAD ND Y+E++
Sbjct: 72  ERELADLIELIELGEMEGDQTVIDDAEEQIRAVKERAAKMELETLLSGEADHNDCYMEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTESQDWA MLLRMYTRWAEK  +K E LE   GE+AGIKSAT+ I G NAYGWLK
Sbjct: 132 AGAGGTESQDWAEMLLRMYTRWAEKHGYKVEWLEESSGEQAGIKSATIRILGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS WVYPV+DDSI+I+I+ES+CRIDTYRASGAGGQH
Sbjct: 192 TESGVHRLVRISPYDSAARRHTSFSSAWVYPVIDDSIDIQINESECRIDTYRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITHIPTG+ V CQ ERSQH+N+A+AW+MLRA+LYE ELQKRE  A   E  
Sbjct: 252 INKTDSAVRITHIPTGIAVACQMERSQHQNRARAWDMLRARLYEAELQKREAAAQALEDQ 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KT+IGWG QIRSYVLQPYQMVKDLRTN+E +    VLDGDLD FM A+LA +
Sbjct: 312 KTDIGWGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDMFMAASLAAR 363


>gi|119897788|ref|YP_933001.1| peptide chain release factor 2 [Azoarcus sp. BH72]
 gi|119670201|emb|CAL94114.1| peptide chain release factor [Azoarcus sp. BH72]
          Length = 373

 Score =  292 bits (747), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 174/343 (50%), Positives = 236/343 (68%), Gaps = 1/343 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D    +L  +N   EDP +W +   A+ L +E++ L+  +  +++I+ +  D  
Sbjct: 30  GGIFDYDEKSSKLEEVNRALEDPAVWNDAARAQELGKEKRQLEGVVLTLQQIEQQSADLK 89

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L +LA  E D    +    +L  ++  V   +F  + S   D N  ++E+ AGAGGTE+
Sbjct: 90  DLFDLADMEGDDDTFEAVEGDLVGLEALVGQLEFRRMFSNPMDPNACFIEIQAGAGGTEA 149

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA ML RMY R+ EK+ F  E +E  +GE AGIK+ T+   G  AYG+L+ E G+HRL
Sbjct: 150 QDWAGMLERMYLRYGEKKGFTVELMEETEGEVAGIKNCTIKFTGDYAYGFLRTETGIHRL 209

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DSN+RRHTSF+S++VYP VDDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAV
Sbjct: 210 VRKSPFDSNARRHTSFTSVFVYPEVDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAV 269

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PTG+VVQCQ +RSQH+NK +A +ML+A+LYELEL+KR+      E +K++IGWG 
Sbjct: 270 RITHQPTGIVVQCQNDRSQHRNKDEAMSMLKARLYELELRKRQAEQQKLEDAKSDIGWGH 329

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QIRSYVL     +KDLRT  E  +   VLDGDL+DF+ A+L  
Sbjct: 330 QIRSYVLD-QSRIKDLRTGYEVGNTQAVLDGDLEDFIAASLKQ 371


>gi|182677929|ref|YP_001832075.1| hypothetical protein Bind_0939 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182633812|gb|ACB94586.1| hypothetical protein Bind_0939 [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 376

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 220/352 (62%), Positives = 269/352 (76%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  L    D D + +RL  LN K E+P LW +   A+ +MRER  L+  +  IK+ 
Sbjct: 12  IKQSLGLLRRHLDVDTSTRRLEELNAKVENPDLWNDAEAAQKIMRERTELEERLGSIKQF 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   L+ELA  E D +  +E  D L+ +K+E E +Q E+LLSGE DSND Y+EVH
Sbjct: 72  EGDLDDAATLIELAEAEGDEASEKEGIDLLKGLKIEAERRQIEALLSGEVDSNDTYIEVH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTES DWA ML RMY RWAE+ +FK E +E   G+EAGIKSATLL+KG NA+GW K
Sbjct: 132 SGAGGTESCDWARMLFRMYARWAERHRFKVEIIEETAGDEAGIKSATLLVKGHNAHGWAK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DSN+RRHTSF+S+WVYPV+DD IEI++ ESDCRIDTYR+SGAGGQH
Sbjct: 192 TESGVHRLVRISPFDSNARRHTSFASVWVYPVIDDKIEIDVKESDCRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +NTTDSAVRITHIP+G+VV CQ ERSQHKN+A AWNMLRA+LYE EL++RE  AN  E++
Sbjct: 252 INTTDSAVRITHIPSGIVVACQGERSQHKNRATAWNMLRARLYEKELERREAEANATEAT 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KTEIGWG QIRSYVLQPYQ+VKDLRT     +P +VLDGDLD FM+A LA K
Sbjct: 312 KTEIGWGHQIRSYVLQPYQLVKDLRTGTTSGTPDEVLDGDLDTFMEAALAQK 363


>gi|197285860|ref|YP_002151732.1| peptide chain release factor 2 [Proteus mirabilis HI4320]
 gi|238693208|sp|B4F0M7|RF2_PROMH RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|194683347|emb|CAR44054.1| peptide chain release factor 2 [Proteus mirabilis HI4320]
          Length = 365

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 185/352 (52%), Positives = 245/352 (69%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +++ +   L G  D+D   +RL  +N + E P +W    +A+ L +ER  L+  +  I +
Sbjct: 13  EVAERTQVLRGYLDYDAKKERLEEVNAELEQPDVWNEPEKAQALGKERSSLEAIVETIDQ 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D   LL+LA+E DD     E    L+ +  ++E  +F  + SGE DS D YL++
Sbjct: 73  LEQGLEDVSGLLDLAVEADDEETFNEAVAELEGLNKKLEQLEFRRMFSGEYDSADCYLDL 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+ML+RMY RWAE R FKTE +E  DG+ AG+KSAT+ I G  AYGWL
Sbjct: 133 QAGSGGTEAQDWASMLMRMYLRWAESRGFKTEIIEESDGDVAGLKSATIKIIGEYAYGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP VDD+I+IEI+ +D RID YRASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDNIDIEINPADLRIDVYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITH+PTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+     + E 
Sbjct: 253 HVNKTESAVRITHVPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNADKQVMED 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 313 NKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363


>gi|315268921|gb|ADT95774.1| Peptide chain release factor 2 [Shewanella baltica OS678]
          Length = 365

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 173/351 (49%), Positives = 234/351 (66%), Gaps = 1/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ +   L G  D+D   +RL  +  + E   +W +   A+ L +ER  L+  +  I +
Sbjct: 13  ELAERTQLLRGYLDYDAKNERLEEVTRELESSEVWNDPERAQALGKERASLEAVVKTIDD 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+EE+D     ETS  L  ++  +   +F  + SG  D+++ YL++
Sbjct: 73  MDSGLEDVEGLLELAIEEEDEDTFNETSKELDYLESRLADLEFRRMFSGPQDASNCYLDI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GGTE+QDWANM+LRMY RW E   F  E +E+ DG+ AGIK AT+   G  A+GWL
Sbjct: 133 QSGSGGTEAQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS+ RRHTSF S++VYP +DD I I+I+ SD RIDTYRASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPSDLRIDTYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SA+RITH+PT  VVQCQ +RSQHKNK  A   L+AKL+ELE+ K+       E 
Sbjct: 253 HVNKTESAIRITHLPTNTVVQCQNDRSQHKNKDAAMKQLKAKLFELEMLKQNADKQAAED 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 313 AKSDIGWGSQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDKFIEASLK 362


>gi|254780753|ref|YP_003065166.1| peptide chain release factor 2 [Candidatus Liberibacter asiaticus
           str. psy62]
 gi|254040430|gb|ACT57226.1| peptide chain release factor 2 [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 355

 Score =  292 bits (746), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 355/355 (100%), Positives = 355/355 (100%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK
Sbjct: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE
Sbjct: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW
Sbjct: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG
Sbjct: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE
Sbjct: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK
Sbjct: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355


>gi|261820184|ref|YP_003258290.1| peptide chain release factor 2 [Pectobacterium wasabiae WPP163]
 gi|261604197|gb|ACX86683.1| hypothetical protein Pecwa_0864 [Pectobacterium wasabiae WPP163]
          Length = 365

 Score =  291 bits (745), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 186/351 (52%), Positives = 239/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++
Sbjct: 14  LSERSAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEVIVDTIDQL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+EEDD     ETS  L  ++ ++   +F  + SG+ DS D YL++ 
Sbjct: 74  AQGLEDVAGLLELAVEEDDEDTFNETSLELDVLENKLGQLEFRRMFSGQYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E  DG+ AG KSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTKSATIKIIGDYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS ++YP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363


>gi|300718200|ref|YP_003743003.1| peptide chain release factor 2 [Erwinia billingiae Eb661]
 gi|299064036|emb|CAX61156.1| Peptide chain release factor 2 [Erwinia billingiae Eb661]
          Length = 348

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 183/347 (52%), Positives = 237/347 (68%), Gaps = 1/347 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GG+FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  + +++  L
Sbjct: 1   MAFSGGIFDYDAKKERLEEVNAELEQPDVWNEPDRAQALGKERSSLEAIVDTLDQMEQGL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LLELA+E DD     ET   L  ++ ++   +F  + SGE DS D Y+++ AG+G
Sbjct: 61  EDVRGLLELAVEADDEETFNETIAELDVLEKKLGELEFRRMFSGEYDSADCYIDIQAGSG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWA ML+RMY RWAE + FKTE +E  +GE AG KSATL I G  A+GWL+ E G
Sbjct: 121 GTEAQDWAGMLVRMYLRWAEAKGFKTEIIEESEGEVAGTKSATLRIIGDYAFGWLRTETG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T
Sbjct: 181 VHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITH+PT  V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++I
Sbjct: 241 ESAVRITHLPTNTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQSLEDNKSDI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           GWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 301 GWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDRFIEASLKA 346


>gi|325578209|ref|ZP_08148344.1| peptide chain release factor RF2 [Haemophilus parainfluenzae ATCC
           33392]
 gi|325159945|gb|EGC72074.1| peptide chain release factor RF2 [Haemophilus parainfluenzae ATCC
           33392]
          Length = 364

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 183/349 (52%), Positives = 248/349 (71%), Gaps = 1/349 (0%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
             L C GG+FD+D  V+RL  +N + E P +W +  +A+ L +ER  L+  +  IK ++ 
Sbjct: 15  SALLCFGGIFDFDAKVERLEEVNAELEQPDVWNDPEKAQALGKERVSLEQVVDTIKNLEQ 74

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
            L D   LLELA+E +D     E    L  ++ ++   +F  + SGE D+ D Y+++ AG
Sbjct: 75  GLEDVEGLLELAVEAEDEETFNEAVAELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAG 134

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           +GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G  A+GWL+ E
Sbjct: 135 SGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIRVSGEYAFGWLRTE 194

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G+HRLVR SP+DSN+RRHTSF++++VYP +DD+I+IEI+ +D RID YRASGAGGQHVN
Sbjct: 195 TGIHRLVRKSPFDSNNRRHTSFAAVFVYPEIDDNIDIEINPADLRIDVYRASGAGGQHVN 254

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T+SAVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+       E +K+
Sbjct: 255 KTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKS 314

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 315 DIGWGSQIRSYVLDD-ARIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 362


>gi|78066892|ref|YP_369661.1| peptide chain release factor 2 [Burkholderia sp. 383]
 gi|77967637|gb|ABB09017.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia sp.
           383]
          Length = 391

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 179/346 (51%), Positives = 249/346 (71%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD+D    RL+ +N + EDP++W +   A+ L RE++ L+  ++ +  +   L 
Sbjct: 45  ASFGGIFDYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLR 104

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D L L ELA EE D   L  + ++  ++   V   +F  + S  AD N+ ++++ AGAGG
Sbjct: 105 DALDLFELAREEGDEDTLVASEEDAAKLASRVGDIEFRRMFSNPADPNNCFIDIQAGAGG 164

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+L+ E G+
Sbjct: 165 TEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVSGEYAYGFLRTETGI 224

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH+N TD
Sbjct: 225 HRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTD 284

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE+E++KR+   +  ESSKT++G
Sbjct: 285 SAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLESSKTDVG 344

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF+ A+L  
Sbjct: 345 WGHQIRSYVLD-QSRVKDLRTNVEMSNTRAVLDGDLDDFISASLKQ 389


>gi|326575346|gb|EGE25274.1| peptide chain release factor 2 [Moraxella catarrhalis CO72]
          Length = 349

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 185/346 (53%), Positives = 244/346 (70%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD ++  +RL  +N + E+P +W N   A  + +E+  LD  +  I  +  +L 
Sbjct: 3   KSFGGIFDIESKKERLEEVNLELENPDIWNNPDLATKISKEKSVLDGIVGVIDGLSAKLD 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   +LELA+E+DD S+L +    L      VE  +F  + SGE D+N+ YL++ +G+GG
Sbjct: 63  DAAAMLELAVEDDDESLLSDVQAELDDALNSVEELEFRRMFSGEMDANNCYLDIQSGSGG 122

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDWA MLLRMY RW E   FK E LE+ +G  AGIKSAT+++KG  A+GWL+ E GV
Sbjct: 123 TEAQDWAQMLLRMYLRWCESHGFKAEVLEVSEGGVAGIKSATIMVKGDYAFGWLRTEIGV 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DSN+ RHTSF++++V P +DD+I I+I+ +D RIDTYR+SGAGGQHVNTTD
Sbjct: 183 HRLVRKSPFDSNNGRHTSFAAVFVSPEIDDNIGIDINPADLRIDTYRSSGAGGQHVNTTD 242

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH PTGVVV CQ ERSQH NK  A  MLRAKLYELE+QKR E     E SK++IG
Sbjct: 243 SAVRITHQPTGVVVACQNERSQHANKDTAMKMLRAKLYELEMQKRMEKQQALEESKSDIG 302

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSYVL     +KDLRT +E ++ + VL+GDLD F++A+L  
Sbjct: 303 WGSQIRSYVLDD-SRIKDLRTGVETSNTTAVLNGDLDKFIEASLKA 347


>gi|309973325|gb|ADO96526.1| Peptide chain release factor 2 (RF-2) [Haemophilus influenzae
           R2846]
          Length = 365

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 184/353 (52%), Positives = 249/353 (70%), Gaps = 1/353 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           + LS + + L G  D+D  V+RL  +N + E P +W +  +A+ L +ER  L+  ++ IK
Sbjct: 12  IDLSDRTSVLRGYLDFDAKVERLEEVNAELEQPDVWNDPDKAQALGKERVSLEQVVNTIK 71

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            ++  L D   LLELA+E +D     E    L  ++ ++E  +F  + SGE D+ D Y++
Sbjct: 72  NLEQGLEDVDGLLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVD 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G  A+GW
Sbjct: 132 LQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGW 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGG
Sbjct: 192 LRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+       E
Sbjct: 252 QHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAME 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 312 DNKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 363


>gi|222150753|ref|YP_002559906.1| peptide chain release factor RF-2 [Macrococcus caseolyticus
           JCSC5402]
 gi|222119875|dbj|BAH17210.1| peptide chain release factor RF-2 [Macrococcus caseolyticus
           JCSC5402]
          Length = 350

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 177/349 (50%), Positives = 234/349 (67%), Gaps = 1/349 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  LGGLFD +     +        DP  W +  +A+ ++ +   L + +     +++ L
Sbjct: 1   MTVLGGLFDLEEKETNIKEYEEMMADPDFWNDGDKAQDIINKNNALKSVVQEFSTLEEGL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            ++ +L E+  EE D    QE  + L  ++      + + LLSGE D+N+A LE+H GAG
Sbjct: 61  ENSEVLFEMYKEESDEDTHQELIEQLNTLQQIANDFELKMLLSGEFDANNAILELHPGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTESQDW  MLLRMY R+A+K+ FK E ++   G+EAGIKS TLLIKG NAYG+LK E+G
Sbjct: 121 GTESQDWGEMLLRMYQRFADKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           VHRLVRISP+DS+ RRHTSF S  V P   +D+IEIEI+  D +IDTYRASGAGGQHVNT
Sbjct: 181 VHRLVRISPFDSSGRRHTSFVSCEVTPEFDNDNIEIEINSEDIKIDTYRASGAGGQHVNT 240

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH PTG+VV CQ ERSQ KN+ QA  ML+AKLY+ +++++E         + E
Sbjct: 241 TDSAVRITHQPTGIVVTCQNERSQIKNREQAMKMLKAKLYQKKIEEQEAELAAIRGEQKE 300

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IGWG QIRSYV  PY MVKD RTN+E  + + V+DGD+D F+ A L  +
Sbjct: 301 IGWGSQIRSYVFHPYSMVKDHRTNVETGNTNAVMDGDIDLFIDAYLKSQ 349


>gi|170733471|ref|YP_001765418.1| peptide chain release factor 2 [Burkholderia cenocepacia MC0-3]
 gi|169816713|gb|ACA91296.1| peptide chain release factor 2 [Burkholderia cenocepacia MC0-3]
          Length = 391

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 180/346 (52%), Positives = 250/346 (72%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD+D    RL+ +N + EDP++W +   A+ L RE++ L+  ++ +  +   L 
Sbjct: 45  ASFGGIFDYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLR 104

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D L L ELA EE D   L  + D+  +++  V   +F  + S  AD N+ ++++ AGAGG
Sbjct: 105 DALDLFELAREEGDEDTLLASEDDAAKLEARVGDIEFRRMFSNPADPNNCFIDIQAGAGG 164

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+L+ E G+
Sbjct: 165 TEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGFLRTETGI 224

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH+N TD
Sbjct: 225 HRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTD 284

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE+E++KR+   +  ESSKT++G
Sbjct: 285 SAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLESSKTDVG 344

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF+ A+L  
Sbjct: 345 WGHQIRSYVLD-QSRVKDLRTNVEMSNTRAVLDGDLDDFISASLKQ 389


>gi|39546356|ref|NP_461957.2| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|267995195|gb|ACY90080.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|323131397|gb|ADX18827.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
          Length = 358

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 187/344 (54%), Positives = 238/344 (69%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++   L D 
Sbjct: 14  LGGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQMTQGLDDV 73

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ AG+GGTE
Sbjct: 74  SGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTE 133

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA+MLLRMY RWAE R FKTE +E  +GE AGIKSAT+ I G  AYGWL+ E GVHR
Sbjct: 134 AQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLRTETGVHR 193

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SA
Sbjct: 194 LVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESA 253

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG
Sbjct: 254 VRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWG 313

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 314 SQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 356


>gi|107028703|ref|YP_625798.1| peptide chain release factor 2 [Burkholderia cenocepacia AU 1054]
 gi|116690138|ref|YP_835761.1| peptide chain release factor 2 [Burkholderia cenocepacia HI2424]
 gi|105897867|gb|ABF80825.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia
           cenocepacia AU 1054]
 gi|116648227|gb|ABK08868.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia
           cenocepacia HI2424]
          Length = 391

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 180/346 (52%), Positives = 250/346 (72%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD+D    RL+ +N + EDP++W +   A+ L RE++ L+  ++ +  +   L 
Sbjct: 45  ASFGGIFDYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLR 104

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D L L ELA EE D   L  + D+  +++  V   +F  + S  AD N+ ++++ AGAGG
Sbjct: 105 DALDLFELAREEGDEDTLLASEDDAAKLEARVGDIEFRRMFSNPADPNNCFIDIQAGAGG 164

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+L+ E G+
Sbjct: 165 TEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGFLRTETGI 224

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH+N TD
Sbjct: 225 HRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTD 284

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE+E++KR+   +  ESSKT++G
Sbjct: 285 SAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLESSKTDVG 344

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF+ A+L  
Sbjct: 345 WGHQIRSYVLD-QSRVKDLRTNVEMSNTRAVLDGDLDDFISASLKQ 389


>gi|307129433|ref|YP_003881449.1| putative peptide chain release factor 2 [Dickeya dadantii 3937]
 gi|306526962|gb|ADM96892.1| putative peptide chain release factor 2 [Dickeya dadantii 3937]
          Length = 365

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 188/351 (53%), Positives = 240/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++
Sbjct: 14  LSERTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEMIVDTIDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+EEDD     +T   L +++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  VQGLDDVSGLLELAVEEDDEDTFNDTVAELDQLESKLGQLEFRRMFSGEYDSADCYLDLQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  +GE AGIKSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESEGEVAGIKSATIKIMGEYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQALEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQSVLDGDLDKFIEASLKA 363


>gi|256821963|ref|YP_003145926.1| peptide chain release factor 2 [Kangiella koreensis DSM 16069]
 gi|256795502|gb|ACV26158.1| bacterial peptide chain release factor 2 (bRF- 2) [Kangiella
           koreensis DSM 16069]
          Length = 365

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 186/351 (52%), Positives = 258/351 (73%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S ++  L G  D+D+  +RL  +  + E P +W +   A+ L +ER  L+  ++ IK++
Sbjct: 14  MSERVTTLRGYLDFDSKQERLVEVERELEQPDVWNDQERAQSLGQERAKLETVVNTIKDL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  + DN  LLEL++EEDD   + E  + ++++   +E  +F  + SGE D N+AYL++ 
Sbjct: 74  EAGIDDNQELLELSVEEDDAESVAEIENEVKQLNTSLEKLEFRRMFSGEMDENNAYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA++LLRMY RW E R FK E  E  DG+ AGIKSAT+ ++G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASILLRMYLRWCESRGFKAEVTEESDGDVAGIKSATIRVEGEYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSF+S++VYP VDDSI+IE++ +D R+DTYRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGNRRHTSFASVFVYPEVDDSIDIEVNPADLRVDTYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSA+R+THIPTG+VVQCQ +RSQHKN+AQA +M++AKLYELE+QK+ E     E +
Sbjct: 254 VNKTDSAIRLTHIPTGIVVQCQNDRSQHKNRAQAMSMMKAKLYELEMQKQREEQQALEDT 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT  E ++ + VLDGDLD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLD-QSRIKDLRTGHESSNTTAVLDGDLDSFIEASLKA 363


>gi|271499213|ref|YP_003332238.1| hypothetical protein Dd586_0640 [Dickeya dadantii Ech586]
 gi|270342768|gb|ACZ75533.1| hypothetical protein Dd586_0640 [Dickeya dadantii Ech586]
          Length = 365

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 187/351 (53%), Positives = 237/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++
Sbjct: 14  LSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEMIVDTIDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  VQGLDDVAGLLELAVEADDEETFNEAIAELDLLEDKLGQLEFRRMFSGEYDSADCYLDLQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  +GE AGIKSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESEGEVAGIKSATIKIMGDYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQALEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQSVLDGDLDKFIEASLKA 363


>gi|150260100|ref|ZP_01916828.1| peptide chain release factor 2 [Yersinia pestis CA88-4125]
 gi|153948098|ref|YP_001399866.1| peptide chain release factor 2 [Yersinia pseudotuberculosis IP
           31758]
 gi|218928062|ref|YP_002345937.1| peptide chain release factor 2 [Yersinia pestis CO92]
 gi|229837575|ref|ZP_04457737.1| Peptide chain release factor 2 [Yersinia pestis Pestoides A]
 gi|229840798|ref|ZP_04460957.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229842643|ref|ZP_04462798.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229903704|ref|ZP_04518817.1| Peptide chain release factor 2 [Yersinia pestis Nepal516]
 gi|257168082|ref|NP_670572.2| peptide chain release factor 2 [Yersinia pestis KIM 10]
 gi|166977375|sp|A7FF38|RF2_YERP3 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|149289508|gb|EDM39585.1| peptide chain release factor 2 [Yersinia pestis CA88-4125]
 gi|152959593|gb|ABS47054.1| peptide chain release factor 2 [Yersinia pseudotuberculosis IP
           31758]
 gi|229679474|gb|EEO75577.1| Peptide chain release factor 2 [Yersinia pestis Nepal516]
 gi|229690953|gb|EEO83007.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229697164|gb|EEO87211.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229704263|gb|EEO91274.1| Peptide chain release factor 2 [Yersinia pestis Pestoides A]
 gi|320014035|gb|ADV97606.1| Peptide chain release factor 2 [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 365

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 186/351 (52%), Positives = 240/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  ++ I ++
Sbjct: 14  LSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSTLEEIVTTIDQL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   LLELA+E DD     ET   L+ +  ++   +F  + SGE D  + YL++ 
Sbjct: 74  EQGLEDVSGLLELAVEADDEETFNETIAELEVLDGKLGQLEFRRMFSGEYDRANCYLDLQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  DG+ AG+KSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAESRGFKTEIIEESDGDVAGLKSATVKIIGEYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E +
Sbjct: 254 VNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363


>gi|16126117|ref|NP_420681.1| peptide chain release factor 2 [Caulobacter crescentus CB15]
 gi|221234887|ref|YP_002517323.1| peptide chain release factor 2 [Caulobacter crescentus NA1000]
 gi|24638156|sp|Q9A752|RF2_CAUCR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|254790910|sp|B8GWM3|RF2_CAUCN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|13423319|gb|AAK23849.1| peptide chain release factor 2 [Caulobacter crescentus CB15]
 gi|220964059|gb|ACL95415.1| bacterial peptide chain Release factor 2 (RF-2) [Caulobacter
           crescentus NA1000]
          Length = 371

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 212/347 (61%), Positives = 256/347 (73%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           +C GG+FDWD A+++L  LN + EDP LW    EA+ + RER +L   +  ++ I+  L 
Sbjct: 14  DCSGGVFDWDVALRKLDELNARVEDPTLWDRPSEAQAVSRERANLAAKVEAVQSIERDLK 73

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D L   ELA  E D   L +    L+ +K      + E+LLSGEAD ND Y+E+++GAGG
Sbjct: 74  DALEYAELAEMESDEDSLNDARAQLKSLKERAGRAELEALLSGEADGNDCYVEINSGAGG 133

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TES DWA +LLRMYTRWA      TE +E  DG++AGIKSATLL+KG NAYGWLK E GV
Sbjct: 134 TESCDWAGILLRMYTRWANAHGMTTELIEETDGDQAGIKSATLLVKGANAYGWLKTEAGV 193

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVRISPYDS++RRHTSF+S WVYPVVDD+IEIEI+ SD R DTYRASGAGGQH+N TD
Sbjct: 194 HRLVRISPYDSSARRHTSFASAWVYPVVDDNIEIEINPSDVRTDTYRASGAGGQHINKTD 253

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+ V CQ  RSQH+N+ +AW MLRA+LYE ELQKRE      E  KT+IG
Sbjct: 254 SAVRLTHIPTGIAVACQAGRSQHQNREEAWKMLRARLYEAELQKREAAQQALEDQKTDIG 313

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYVLQPYQMVKDLRTN+E +    VLDGDLD FM A+LA +
Sbjct: 314 WGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDAFMAASLAQR 360


>gi|304386240|ref|ZP_07368573.1| peptide chain release factor RF2 [Pediococcus acidilactici DSM
           20284]
 gi|304327597|gb|EFL94824.1| peptide chain release factor RF2 [Pediococcus acidilactici DSM
           20284]
          Length = 362

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 174/355 (49%), Positives = 232/355 (65%), Gaps = 1/355 (0%)

Query: 1   MKL-SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
           MK+  ++    GGLFD D   + +S    K  +P  W +  +A+ ++ E   L       
Sbjct: 1   MKICKKRSLTSGGLFDLDALNESISVNEAKMAEPDFWNDQEKAQKIINETNVLKAKYDNF 60

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           K + D + +  + LEL   E D  +  E  D L +    +   +   LL+G+ D+N+A L
Sbjct: 61  KNLTDHVENLEVTLELLEMEADPDVQAEFEDELSQTAKLLRDYRLGLLLNGKYDANNAIL 120

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           E+H GAGGTESQDW +MLLRMYTRWAE+ +FK +  +   GE AGI S T+ + G NAYG
Sbjct: 121 EIHPGAGGTESQDWGSMLLRMYTRWAEQHQFKVQIEDYQAGEVAGISSVTIRVMGHNAYG 180

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           +L+ E+GVHRLVR+SP+DS  RRHTSF+S+ V P +DDS+E+ I+  D R+D YR+SGAG
Sbjct: 181 YLRSEKGVHRLVRLSPFDSAGRRHTSFASVDVMPELDDSVEVNINPDDLRVDVYRSSGAG 240

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQH+N T SAVRITH+PTG+VV  Q ERSQ +N+  A NML+AKL+ELE QK+ E     
Sbjct: 241 GQHINKTSSAVRITHLPTGIVVASQAERSQLQNRVTAMNMLKAKLFELEEQKKAEEKAKL 300

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           E ++ EIGWG QIRSYV  PY MVKD RTN+E  +   V+DGDLDDF+ A L  K
Sbjct: 301 EGTQLEIGWGSQIRSYVFHPYSMVKDHRTNLETANVQGVMDGDLDDFINAYLQWK 355


>gi|227510661|ref|ZP_03940710.1| peptide chain release factor 2 [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227190313|gb|EEI70380.1| peptide chain release factor 2 [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 354

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 173/345 (50%), Positives = 226/345 (65%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGGLFD+D   + +S    K  +P  W +   A+ L+ E   L         + + L D 
Sbjct: 3   LGGLFDFDALSESISINEAKMAEPGFWDDQQAAQKLIDETNQLKTKRDRFDTLTNELDDL 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
            + LEL  E+ D  +  E      ++K +++  Q   LL+G+ D N+A LE+H GAGGTE
Sbjct: 63  KVTLELISEDPDSGMQDEFIGEADKLKKQLDRYQLGLLLNGKYDHNNAILEIHPGAGGTE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW +MLLRMYTRWAE   FK + L+   GE AGI S ++LI G NAYG+L+ E+GVHR
Sbjct: 123 AQDWGSMLLRMYTRWAETHDFKVDVLDYQVGEVAGINSVSILINGENAYGYLRSEKGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+DS  RRHTSF+S+ V P +DD + I+IS  + ++D YRASGAGGQHVN T SA
Sbjct: 183 LVRISPFDSAGRRHTSFASVDVMPELDDDVSIKISPDELKVDVYRASGAGGQHVNKTSSA 242

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG+VV  Q +RSQ +N+  A NML++KLYELE QK+ E     E  + +IGWG
Sbjct: 243 VRITHIPTGIVVASQAQRSQLQNRQTALNMLKSKLYELEEQKKAEEKAKIEGEQLDIGWG 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            QIRSYV  PY MVKD RTN E  + + V+DGDLD F+ A L  +
Sbjct: 303 SQIRSYVFHPYSMVKDHRTNYETANVNGVMDGDLDPFINAYLQWQ 347


>gi|206560551|ref|YP_002231316.1| peptide chain release factor 2 [Burkholderia cenocepacia J2315]
 gi|238693117|sp|B4EDB1|RF2_BURCJ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|198036593|emb|CAR52490.1| peptide chain release factor 2 [Burkholderia cenocepacia J2315]
          Length = 367

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 179/353 (50%), Positives = 251/353 (71%), Gaps = 1/353 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           + L  +   L G  D+D    RL+ +N + EDP++W +   A+ L RE++ L+  ++ + 
Sbjct: 14  LDLRNRAGELRGYLDYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLT 73

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            +   L D L L ELA EE D   L  + ++  +++  V   +F  + S  AD N+ +++
Sbjct: 74  ALDSDLRDALDLFELAREEGDEDTLLASEEDAAKLEARVGDIEFRRMFSNPADPNNCFID 133

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+
Sbjct: 134 IQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGF 193

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGG
Sbjct: 194 LRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGG 253

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE+E++KR+   +  E
Sbjct: 254 QHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLE 313

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           SSKT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF+ A+L  
Sbjct: 314 SSKTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTRAVLDGDLDDFISASLKQ 365


>gi|53719890|ref|YP_108876.1| peptide chain release factor 2 [Burkholderia pseudomallei K96243]
 gi|53723794|ref|YP_103319.1| peptide chain release factor 2 [Burkholderia mallei ATCC 23344]
 gi|226830773|ref|YP_001066897.2| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei 1106a]
 gi|254200276|ref|ZP_04906642.1| peptide chain release factor 2 [Burkholderia mallei FMH]
 gi|254209352|ref|ZP_04915698.1| peptide chain release factor 2 [Burkholderia mallei JHU]
 gi|81604734|sp|Q62J00|RF2_BURMA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|81607820|sp|Q63SP0|RF2_BURPS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|229576668|sp|A3NX26|RF2_BURP0 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|52210304|emb|CAH36283.1| peptide chain release factor 2 [Burkholderia pseudomallei K96243]
 gi|52427217|gb|AAU47810.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           mallei ATCC 23344]
 gi|147749872|gb|EDK56946.1| peptide chain release factor 2 [Burkholderia mallei FMH]
 gi|147750125|gb|EDK57196.1| peptide chain release factor 2 [Burkholderia mallei JHU]
 gi|213385360|gb|ABN92528.3| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 1106a]
          Length = 367

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 180/351 (51%), Positives = 251/351 (71%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L R+   L G  D+D   +RL+ +N + EDP++W +   A+ L RE++ L++ ++ +  +
Sbjct: 16  LRRRAGELRGYLDYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLESVVTTLTAL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L ELA EE D   L  T  +  +++  V   +F  + S  AD N+ ++++ 
Sbjct: 76  DNDLRDAQDLFELAHEEGDEETLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++L+E EL+KR+   +  ESS
Sbjct: 256 INKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESS 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF+ A+L  
Sbjct: 316 KTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTKAVLDGDLDDFISASLKQ 365


>gi|322831509|ref|YP_004211536.1| Peptide chain release factor 2 [Rahnella sp. Y9602]
 gi|321166710|gb|ADW72409.1| Peptide chain release factor 2 [Rahnella sp. Y9602]
          Length = 365

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 188/351 (53%), Positives = 236/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  I E+
Sbjct: 14  LSERTVVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVETIDEL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
                D   LLELA+E DD     ET   L  +  ++E  +F  + SGE DS   YL++ 
Sbjct: 74  LQGAEDVTGLLELAVEADDEDTFNETVAELDVLTAKLEQLEFRRMFSGEYDSASCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  DGE AG+KSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEAKGFKTEVIEESDGEVAGLKSATIKIIGDYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD IEIEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIEIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+PT +V QCQ +RSQHKNK QA   +RAKLYE E+QK+       E +
Sbjct: 254 VNKTESAVRITHLPTNIVTQCQNDRSQHKNKDQAMKQMRAKLYEYEMQKKNADKQQLEDT 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363


>gi|312947424|gb|ADR28251.1| peptide chain release factor 2 [Escherichia coli O83:H1 str. NRG
           857C]
          Length = 357

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 186/344 (54%), Positives = 237/344 (68%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  + +++  L D 
Sbjct: 13  LGGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDV 72

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ AG+GGTE
Sbjct: 73  SGLLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTE 132

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+ E GVHR
Sbjct: 133 AQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHR 192

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SA
Sbjct: 193 LVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESA 252

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG
Sbjct: 253 VRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWG 312

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 313 SQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 355


>gi|251790993|ref|YP_003005714.1| hypothetical protein Dd1591_3423 [Dickeya zeae Ech1591]
 gi|247539614|gb|ACT08235.1| hypothetical protein Dd1591_3423 [Dickeya zeae Ech1591]
          Length = 365

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 188/351 (53%), Positives = 240/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++
Sbjct: 14  LSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEMIVDTIDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+EEDD     +T   L +++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  VQGLDDVAGLLELAVEEDDEDTFNDTVAELDQLESKLGQLEFRRMFSGEYDSADCYLDLQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  +GE AGIKSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESEGEVAGIKSATIKIMGDYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQSVLDGDLDKFIEASLKA 363


>gi|160876721|ref|YP_001556037.1| peptide chain release factor 2 [Shewanella baltica OS195]
 gi|160862243|gb|ABX50777.1| peptide chain release factor 2 [Shewanella baltica OS195]
          Length = 352

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 174/343 (50%), Positives = 233/343 (67%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+D   +RL  +  + E   +W +   A+ L +ER  L+  +  I ++   L D 
Sbjct: 8   LGGIFDYDAKNERLEEVTRELESSEVWNDPERAQALGKERASLEAVVKTIDDMDSGLEDV 67

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+EE+D     ETS  L  ++  +   +F  + SG  D+++ YL++ +G+GGTE
Sbjct: 68  EGLLELAIEEEDEDTFNETSKELDYLESRLADLEFRRMFSGPQDASNCYLDIQSGSGGTE 127

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANM+LRMY RW E   F  E +E+ DG+ AGIK AT+   G  A+GWL+ E GVHR
Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS+ RRHTSF S++VYP +DD I I+I+ SD RIDTYRASGAGGQHVN T+SA
Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPSDLRIDTYRASGAGGQHVNKTESA 247

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +RITH+PT  VVQCQ +RSQHKNK  A   L+AKL+ELE+ K+       E +K++IGWG
Sbjct: 248 IRITHLPTNTVVQCQNDRSQHKNKDAAMKQLKAKLFELEMLKQNADKQAAEDAKSDIGWG 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 308 SQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDKFIEASLK 349


>gi|254191408|ref|ZP_04897912.1| peptide chain release factor 2 [Burkholderia pseudomallei Pasteur
           52237]
 gi|157939080|gb|EDO94750.1| peptide chain release factor 2 [Burkholderia pseudomallei Pasteur
           52237]
          Length = 367

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 180/351 (51%), Positives = 251/351 (71%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L R+   L G  D+D   +RL+ +N + EDP++W +   A+ L RE++ L++ ++ +  +
Sbjct: 16  LRRRAGELRGYLDYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLESVVTTLTAL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L ELA EE D   L  T  +  +++  V   +F  + S  AD N+ ++++ 
Sbjct: 76  DNDLRDAQALFELAHEEGDEETLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++L+E EL+KR+   +  ESS
Sbjct: 256 INKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESS 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF+ A+L  
Sbjct: 316 KTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTKAVLDGDLDDFISASLKQ 365


>gi|114320956|ref|YP_742639.1| peptide chain release factor 2 [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227350|gb|ABI57149.1| bacterial peptide chain release factor 2 (bRF-2) [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 354

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 176/344 (51%), Positives = 244/344 (70%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+D   +RL  +  + E P +W +   A+ L RER  L+  +   + +   L D 
Sbjct: 10  LGGIFDYDLKRERLEEVTRELEQPEVWNDPERAQSLGRERAQLEGLVETFERLDSVLGDA 69

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLE+A +E D   +     +L   + E++  +F  + SGE D  +A++++ AGAGGTE
Sbjct: 70  DELLEMAADEGDEETVAALQSDLGDCERELQKLEFRRMFSGEMDPANAFMDIQAGAGGTE 129

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANMLLRMY RW E+  FKTE +E+ +G+EAGIKSAT+  +G  A+GWL+ E G+HR
Sbjct: 130 AQDWANMLLRMYLRWGERHGFKTEIIELSEGDEAGIKSATVKFEGEYAFGWLRTEIGIHR 189

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS +RRHTSF+S++V P VDD ++I+I+ +D R+D YRASGAGGQHVN T+SA
Sbjct: 190 LVRKSPFDSGNRRHTSFASVFVSPEVDDDVDIDINPADLRVDVYRASGAGGQHVNRTESA 249

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+P+G+VVQCQQ+RSQHKN+A A   L++KL+ELE+QKR + A   E +K++IGWG
Sbjct: 250 VRITHMPSGIVVQCQQDRSQHKNRATAMKQLKSKLFELEMQKRRDEAEAVEGTKSDIGWG 309

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 310 NQIRSYVLD-QSRIKDLRTGVEVGNTQAVLDGDLDQFIEASLKA 352


>gi|260581088|ref|ZP_05848909.1| peptide chain release factor 2 [Haemophilus influenzae RdAW]
 gi|260092217|gb|EEW76159.1| peptide chain release factor 2 [Haemophilus influenzae RdAW]
          Length = 351

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 185/347 (53%), Positives = 248/347 (71%), Gaps = 1/347 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L C GG+FD+D  V+RL  +N + E P +W +  +A+ L +ER  L+  ++ IK ++  L
Sbjct: 4   LQCFGGIFDFDAKVERLEEVNGELEQPDVWNDPDKAQALGKERVSLEQVVNTIKNLEQGL 63

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LLELA+E +D     E    L  ++ ++E  +F  + SGE D+ D Y+++ AG+G
Sbjct: 64  EDVDGLLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVDLQAGSG 123

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G  A+GWL+ E G
Sbjct: 124 GTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETG 183

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T
Sbjct: 184 IHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKT 243

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+       E +K++I
Sbjct: 244 ESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDI 303

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           GWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 304 GWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 349


>gi|262274920|ref|ZP_06052731.1| peptide chain release factor 2 [Grimontia hollisae CIP 101886]
 gi|262221483|gb|EEY72797.1| peptide chain release factor 2 [Grimontia hollisae CIP 101886]
          Length = 347

 Score =  289 bits (740), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 179/344 (52%), Positives = 242/344 (70%), Gaps = 1/344 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGG+FD+D   +RL  +N + E P +W +   A+ L RER  L+  +  I ++      
Sbjct: 2   SLGGIFDYDAKKERLEEVNAELEQPDVWNDPERAQALGRERASLEAVVETIDQLAQGGEY 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              LLELA+EE+D     E    L  ++ ++   +F  + SG+ D++D Y+++ AG+GGT
Sbjct: 62  ITELLELAVEENDQETFDEIEPELNDLEDKLAKLEFRRMFSGDHDASDCYIDLQAGSGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDW +M+LRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G  AYGWL+ E GVH
Sbjct: 122 EAQDWTSMMLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRISGEYAYGWLRTETGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DS  RRHTSF+S ++YP VD++I+I+I+ +D RID YRASGAGGQHVNTT+S
Sbjct: 182 RLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIDINPADLRIDVYRASGAGGQHVNTTES 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITHIPT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+       E++K++IGW
Sbjct: 242 AVRITHIPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEAAKSDIGW 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 302 GSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKFIEASLK 344


>gi|330447415|ref|ZP_08311064.1| peptide chain release factor 2 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491606|dbj|GAA05561.1| peptide chain release factor 2 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 347

 Score =  289 bits (740), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 177/344 (51%), Positives = 239/344 (69%), Gaps = 1/344 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGG FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++   + D
Sbjct: 2   SLGGTFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERASLEAVVETIDQLDQGVED 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              LLELA+EE+D     E    L  ++ ++   +F  + +G+ D +D Y+++ AG+GGT
Sbjct: 62  VEGLLELAVEEEDQETFDEIEPELAELEEKLAKLEFRRMFAGDHDPSDCYVDLQAGSGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDW +M+LRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ + G  AYGWL+ E GVH
Sbjct: 122 EAQDWTSMMLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATIRVSGEYAYGWLRTETGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DS  RRHTSF+S +VYP +DD+I I+I+ SD RID YRASGAGGQHVNTT+S
Sbjct: 182 RLVRKSPFDSGGRRHTSFASAFVYPEIDDNIAIDINPSDLRIDVYRASGAGGQHVNTTES 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PT +VVQCQ +RSQHKNK QA   L+AKL+E ELQK+       E SK++IGW
Sbjct: 242 AVRITHLPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEFELQKQNAEKQANEDSKSDIGW 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 302 GSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLK 344


>gi|170725301|ref|YP_001759327.1| hypothetical protein Swoo_0939 [Shewanella woodyi ATCC 51908]
 gi|238688657|sp|B1KFR6|RF2_SHEWM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|169810648|gb|ACA85232.1| hypothetical protein Swoo_0939 [Shewanella woodyi ATCC 51908]
          Length = 365

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 173/350 (49%), Positives = 237/350 (67%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +   L G+FD+D   +RL  ++ + E   +W N   A+ L +ER  L+  +  I ++
Sbjct: 14  LADRTLLLRGIFDYDAKKERLEEVSAELESSEVWNNPENAQALGKERSALELVVKTIDDM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   L+ELA+EE+D     + S  L  ++  +E  +F  + SG  D +D YL++ 
Sbjct: 74  DSGLEDVEGLVELAVEEEDEETFADASSELDALEKRLEELEFRRMFSGPHDISDCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +G+GGTE+QDWANM+LRM+ RW E   +K E +E+ DG+ AGIK AT+   G  A+G L+
Sbjct: 134 SGSGGTEAQDWANMVLRMFLRWGEAHDYKPELIEVTDGDVAGIKGATIKFTGEYAFGSLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+RITH+PT  VVQCQ +RSQHKN+  A   L+AKLYELE+ K+       E +
Sbjct: 254 VNKTESAIRITHVPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNADKQQAEDA 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 314 KSDIGWGSQIRSYVLDD-ARIKDLRTGVESRNTQSVLDGDLDKFIEASLK 362


>gi|229916623|ref|YP_002885269.1| peptide chain release factor 2 [Exiguobacterium sp. AT1b]
 gi|259585245|sp|C4L5K9|RF2_EXISA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|229468052|gb|ACQ69824.1| peptide chain release factor 2 [Exiguobacterium sp. AT1b]
          Length = 366

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 175/350 (50%), Positives = 234/350 (66%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++++L       +      R++ L  +   P  W N  +A+ ++ E   L   +   +++
Sbjct: 13  MAKRLENYRASLNLTEKEARIAELENEMTYPDFWDNQEKAQKVIDESNGLKAMVDKYQDL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            ++  D  + LEL  EE D  + +E  +++Q +K E +  + E LL+G  D+N+A LE+H
Sbjct: 73  ANQHEDGEVTLELIKEEPDAEMQEELGESIQALKKEFDDFELEILLNGPYDANNAILELH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+MLLRMY R+A+K+ +K E ++   GEEAG+KS TL I G NAYG+LK
Sbjct: 133 PGAGGTESQDWASMLLRMYQRFADKQGWKVETVDYLPGEEAGVKSVTLRIVGHNAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+G+HRLVRISP+DS+ RRHTSF S  V P  DD IEIE+   D RIDTYRASGAGGQH
Sbjct: 193 AEKGIHRLVRISPFDSSGRRHTSFVSCDVMPEFDDDIEIEVRTEDLRIDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +NTTDSAVRITH+PTGVVV CQ ERSQ KN+  A  ML+AKLY+ EL +++   +     
Sbjct: 253 INTTDSAVRITHVPTGVVVSCQTERSQIKNRESAMKMLKAKLYQRELDEQQRKLDEIRGE 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           KT+IGWG QIRSYV  PY MVKD RTN E  + S V+DGD+  F+ A L 
Sbjct: 313 KTDIGWGSQIRSYVFHPYSMVKDHRTNYEVGNTSGVMDGDVMPFIDAYLR 362


>gi|39997376|ref|NP_953327.1| peptide chain release factor 2 [Geobacter sulfurreducens PCA]
 gi|39984267|gb|AAR35654.1| peptide chain release factor 2, programmed frameshift [Geobacter
           sulfurreducens PCA]
 gi|307634992|gb|ADI85036.2| peptide chain release factor 2 [Geobacter sulfurreducens KN400]
          Length = 372

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 182/348 (52%), Positives = 241/348 (69%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
            ++  L G  D D+  + +  L  +   P  W N  EA+ ++RER  ++  I     +  
Sbjct: 14  ERIAKLRGSLDIDSKREDIQELEAQIAAPGFWDNNEEAQKVLRERTRIEKLIDLWDRLNR 73

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
           +  D  +L+EL  E  D + L E       ++ EVE  +F+ +LSG  D N  ++ ++AG
Sbjct: 74  QADDIRVLIELGEEAQDEATLDEVRALNDSLEREVEGAEFQRMLSGPHDKNSCFVSINAG 133

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGGTE+QDWA MLLRMY R+ E++ +KTE  +   G+EAG+KSAT  + G  AYG+LK E
Sbjct: 134 AGGTEAQDWAEMLLRMYLRYCERKGWKTEITDFQAGDEAGVKSATFTVDGEYAYGYLKAE 193

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G+HRLVRISP+DSN+RRHTSF+S++V+P ++D IEI+I+ESD R+DTYR+SGAGGQHVN
Sbjct: 194 AGIHRLVRISPFDSNARRHTSFASVFVFPEIEDDIEIKIAESDLRVDTYRSSGAGGQHVN 253

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVR+TH+PTG+VV CQ ERSQH NKA A  MLRAKLYE ELQ+RE  A+     K 
Sbjct: 254 TTDSAVRLTHLPTGIVVACQCERSQHLNKATALRMLRAKLYEKELQEREVQASELAGEKK 313

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IGWG QIRSYVL PY+MVKDLRT +E  +P  VLDG L+DF+ A L 
Sbjct: 314 DIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGALEDFVVAFLM 361


>gi|296112892|ref|YP_003626830.1| peptide chain release factor 2 [Moraxella catarrhalis RH4]
 gi|295920586|gb|ADG60937.1| peptide chain release factor 2 [Moraxella catarrhalis RH4]
 gi|326564445|gb|EGE14672.1| peptide chain release factor 2 [Moraxella catarrhalis 103P14B1]
 gi|326566640|gb|EGE16781.1| peptide chain release factor 2 [Moraxella catarrhalis 12P80B1]
 gi|326567583|gb|EGE17698.1| peptide chain release factor 2 [Moraxella catarrhalis BC1]
 gi|326569431|gb|EGE19491.1| peptide chain release factor 2 [Moraxella catarrhalis BC8]
 gi|326571371|gb|EGE21386.1| peptide chain release factor 2 [Moraxella catarrhalis BC7]
 gi|326576569|gb|EGE26476.1| peptide chain release factor 2 [Moraxella catarrhalis 101P30B1]
 gi|326577414|gb|EGE27298.1| peptide chain release factor 2 [Moraxella catarrhalis O35E]
          Length = 349

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 185/346 (53%), Positives = 245/346 (70%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD ++  +RL  +N + E+P +W N   A  + +E+  LD  +  I  +  +L 
Sbjct: 3   KSFGGIFDIESKKERLEEVNLELENPDIWNNPDLATKISKEKSVLDGIVGVIDGLSAKLD 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   +LELA+E+DD S+L +    L      VE  +F  + SGE D+N+ YL++ +G+GG
Sbjct: 63  DAAAMLELAVEDDDESLLSDVQAELDDALNSVEELEFRRMFSGEMDANNCYLDIQSGSGG 122

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDWA MLLRMY RW E   FK E LE+ +G  AGIKSAT+++KG  A+GWL+ E GV
Sbjct: 123 TEAQDWAQMLLRMYLRWCESHGFKAEVLEVSEGGVAGIKSATIMVKGDYAFGWLRTEIGV 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DSN+ RHTSF++++V P +DD+I+I+I+ +D RIDTYR+SGAGGQHVNTTD
Sbjct: 183 HRLVRKSPFDSNNGRHTSFAAVFVSPEIDDNIDIDINPADLRIDTYRSSGAGGQHVNTTD 242

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH PTGVVV CQ ERSQH NK  A  MLRAKLYELE+QKR E     E SK++IG
Sbjct: 243 SAVRITHQPTGVVVACQNERSQHANKDTAMKMLRAKLYELEMQKRMEKQQALEESKSDIG 302

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSYVL     +KDLRT +E ++ + VL+GDLD F++A+L  
Sbjct: 303 WGSQIRSYVLDD-SRIKDLRTGVETSNTTAVLNGDLDKFIEASLKA 347


>gi|226314892|ref|YP_002774788.1| peptide chain release factor 2 [Brevibacillus brevis NBRC 100599]
 gi|226097842|dbj|BAH46284.1| peptide chain release factor 2 [Brevibacillus brevis NBRC 100599]
          Length = 370

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 163/352 (46%), Positives = 235/352 (66%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++++L  + G  D     +R+  L  +   P  W +   A+  + E   + + +  + ++
Sbjct: 16  MAKRLADIRGSLDLPVKQERIGELEERMLAPDFWDDNDAAQKTISELNAIKSLVETMAKL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D  ++LEL +EE D S++ +  D+ Q ++   E  + E LLS E D N+A LE+H
Sbjct: 76  DSQYEDLQVMLELVIEEGDSSLIPDLYDSTQELRKSFESFELELLLSDEYDKNNAILELH 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+MLLRMYTRW + + FK E L+   G+EAG+KS TLLIKG NAYG+LK
Sbjct: 136 PGAGGTESQDWASMLLRMYTRWGDAKGFKVETLDYLPGDEAGVKSVTLLIKGYNAYGYLK 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+D++ RRHTSF S  V P ++D   ++I   D ++DTYR+SGAGGQH
Sbjct: 196 SEKGVHRLVRISPFDASGRRHTSFVSCNVLPEIEDDNVVDIRTEDLKVDTYRSSGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +NTTDSAVRITH+P+G+VV CQ ERSQ KN+ +A  ML A+L+E + +++E+     +  
Sbjct: 256 INTTDSAVRITHLPSGIVVTCQTERSQIKNRERAMKMLTARLFEKKREEQEKTLAAIQGE 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + +I WG QIRSYV  PY +VKD RTN+E  +   V+DG++D F+ A L  +
Sbjct: 316 QKDIAWGSQIRSYVFHPYSLVKDHRTNMEVGNVQAVMDGEIDSFIDAYLRAQ 367


>gi|123443573|ref|YP_001007546.1| peptide chain release factor 2 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|166225120|sp|A1JPL5|RF2_YERE8 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|122090534|emb|CAL13403.1| peptide chain release factor 2 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 365

 Score =  289 bits (739), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 184/351 (52%), Positives = 238/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  ++ I ++
Sbjct: 14  LSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEEIVTTIDQL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + D   LLELA+E DD     E    L  +  ++   +F  + SGE DS + YL++ 
Sbjct: 74  DQGMDDVTGLLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  DG+ AG+KSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGDVAGLKSATIKIIGDYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E +
Sbjct: 254 VNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQMLEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 363


>gi|1172913|sp|P43918|RF2_HAEIN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|309751145|gb|ADO81129.1| Peptide chain release factor 2 (RF-2) [Haemophilus influenzae
           R2866]
          Length = 365

 Score =  289 bits (739), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 184/353 (52%), Positives = 249/353 (70%), Gaps = 1/353 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           + LS + + L G  D+D  V+RL  +N + E P +W +  +A+ L +ER  L+  ++ IK
Sbjct: 12  IDLSDRTSVLRGYLDFDAKVERLEEVNGELEQPDVWNDPDKAQALGKERVSLEQVVNTIK 71

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            ++  L D   LLELA+E +D     E    L  ++ ++E  +F  + SGE D+ D Y++
Sbjct: 72  NLEQGLEDVDGLLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVD 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G  A+GW
Sbjct: 132 LQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGW 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGG
Sbjct: 192 LRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+       E
Sbjct: 252 QHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAME 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 312 DNKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 363


>gi|16761822|ref|NP_457439.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29143309|ref|NP_806651.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56414987|ref|YP_152062.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197363916|ref|YP_002143553.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|61230204|sp|P0A289|RF2_SALTY RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|61230205|sp|P0A290|RF2_SALTI RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|76363351|sp|Q5PJG1|RF2_SALPA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|238690721|sp|B5BFK6|RF2_SALPK RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|25299688|pir||AG0871 peptide chain release factor 2 (RF-2) [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|154276|gb|AAA72914.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhimurium]
 gi|16504124|emb|CAD02871.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29138943|gb|AAO70511.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56129244|gb|AAV78750.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197095393|emb|CAR60952.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 365

 Score =  289 bits (739), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 187/351 (53%), Positives = 239/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + N L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERTNVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  TQGLDDVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  +GE AGIKSAT+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDT 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|297568438|ref|YP_003689782.1| hypothetical protein DaAHT2_0457 [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296924353|gb|ADH85163.1| conserved hypothetical protein [Desulfurivibrio alkaliphilus AHT2]
          Length = 368

 Score =  289 bits (739), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 177/352 (50%), Positives = 241/352 (68%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L  L    D DN + R+  L  ++  P+ W N   A  + +E+  L + I   +++
Sbjct: 16  LQGRLQTLRSHLDLDNKLLRIQELEHRSAAPNFWDNPEAAAGVQKEQSDLQDTIDNWQQV 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            D   D  +LLELA+ E+D    QE S  L  ++  +   + E + +GE D+++A L +H
Sbjct: 76  IDSFEDAEVLLELAIAENDHETEQEVSRALNSVEQRLAAMELECMFNGEHDASNAMLTIH 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDW ++LLRMY RWAEK+ F TE L+   G+EAG KS T+L+KG  AYG+L+
Sbjct: 136 AGAGGTEAQDWTDILLRMYLRWAEKKGFSTEILDHLPGDEAGTKSVTVLVKGRWAYGYLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVRISP+D+  RRHTSF+S++++P +DD+IE+EI++ D RIDTYRASGAGGQH
Sbjct: 196 SEMGIHRLVRISPFDTGGRRHTSFASVFIFPELDDNIEVEINDKDLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T SA+RITH+P+G+VVQCQ ERSQH+NK  A  ML+A+LYE E   R+E        
Sbjct: 256 VNKTSSAIRITHLPSGIVVQCQNERSQHRNKDTAMKMLKAQLYERERANRKEEQQHLHGD 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K EI WG QIRSYVLQPY++VKD RTN E  +  +VLDGDLD F+ + L  +
Sbjct: 316 KKEIAWGSQIRSYVLQPYRLVKDHRTNHETGNVDNVLDGDLDPFIISYLLWQ 367


>gi|295689553|ref|YP_003593246.1| hypothetical protein Cseg_2164 [Caulobacter segnis ATCC 21756]
 gi|295431456|gb|ADG10628.1| conserved hypothetical protein [Caulobacter segnis ATCC 21756]
          Length = 373

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 209/352 (59%), Positives = 255/352 (72%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + +  L    DWD A+++L  LN + EDP LW    EA+ + RER  L   +  ++ I
Sbjct: 12  IEQSVGLLRRRLDWDVALRKLDELNARVEDPTLWDRPSEAQAVSRERAALAAKVEAVQSI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D +   ELA  E D   L +    L+ +K      + E+LLSGEAD NDAY+E++
Sbjct: 72  ERDLKDAVEYAELADMEGDEESLNDARVQLKALKDRAGRAELEALLSGEADGNDAYIEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTES DWA +LLRMYTRWA     +TE +E  DG++AGIKSATLL+KGPNAYGWLK
Sbjct: 132 SGAGGTESCDWAGILLRMYTRWANAHGMQTELIEETDGDQAGIKSATLLVKGPNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS++RRHTSF+S WVYPVVDD+IEIEI+ +D R DTYRASGAGGQH
Sbjct: 192 TEAGVHRLVRISPYDSSARRHTSFASAWVYPVVDDTIEIEINPADVRTDTYRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVR+THIPTG+ V CQ  RSQH+N+ +AW MLRA+LYE ELQKRE      E  
Sbjct: 252 INKTDSAVRLTHIPTGIAVACQAGRSQHQNREEAWKMLRARLYEAELQKREAAQQALEDQ 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KT+IGWG QIRSYVLQPYQMVKDLRTN+E +    VLDGDLD FM A LA +
Sbjct: 312 KTDIGWGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDAFMGAALAQR 363


>gi|224552865|gb|ACN55074.1| peptide chain release factor 2, programmed frameshift [Bacillus
           anthracis str. 'Ames Ancestor']
          Length = 365

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 171/353 (48%), Positives = 228/353 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L    G  D     ++++ L  K      W +   A+ ++ E   L + +   ++
Sbjct: 12  KMAKRLAAFRGSLDLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   +  I  EL  EE D  + +E    ++ +  E+   + + LLS   D N A LE+
Sbjct: 72  LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNKAILEL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAEKR FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 132 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P  +D +EIE+   D +IDTYRASGAGGQ
Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PT  VV CQ ERSQ KN+  A  ML+AKLY+ +L++++   +    
Sbjct: 252 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EIGWG QIRSYV  PY +VKD RTN E  +   V+DG++D F+ A L  +
Sbjct: 312 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 364


>gi|218555439|ref|YP_002388352.1| peptide chain release factor 2 [Escherichia coli IAI1]
 gi|226739127|sp|B7LYF5|RF2_ECO8A RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|218362207|emb|CAQ99825.2| peptide chain release factor RF-2 [Escherichia coli IAI1]
          Length = 365

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 185/351 (52%), Positives = 238/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|255320321|ref|ZP_05361506.1| peptide chain release factor 2 [Acinetobacter radioresistens SK82]
 gi|255302760|gb|EET81992.1| peptide chain release factor 2 [Acinetobacter radioresistens SK82]
          Length = 351

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 180/347 (51%), Positives = 243/347 (70%), Gaps = 1/347 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GG+FD+D   +RL  +  + EDP +W +   A+ + +E+  L+N I+ ++ +  +L
Sbjct: 4   VRLYGGIFDYDLKKERLEEVLRELEDPSIWNDQSRAQAMAKEKGELENVINVLEGLSTQL 63

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   +L+LA+E DD S+L +    L   +  +   +F  + S   D N  Y+E+ AG+G
Sbjct: 64  EDAQAMLDLAVEADDESLLADVQAELSSAEEALAKLEFRRMFSNPMDPNPCYVEIQAGSG 123

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWA+MLLRMY RW E+  FK E +E  DG+ AGIKSAT+ ++G  AYGWL+ E G
Sbjct: 124 GTEAQDWASMLLRMYMRWIERHGFKAELMEESDGDVAGIKSATIRVEGEYAYGWLRTESG 183

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR SP+DS +RRHTSFS+++V P VDD+IEI+I+ SD R DTYRASGAGGQH+N T
Sbjct: 184 VHRLVRKSPFDSGNRRHTSFSAVFVSPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKT 243

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVR+TH+PTG+VV CQ +RSQH N+  AW  LRAKLYELE+ KR E A   E SK++I
Sbjct: 244 DSAVRLTHMPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMSKRNEAAQALEDSKSDI 303

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           GWG QIRSYVL     +KDLRT +E ++   VLDGDLD F++A+L  
Sbjct: 304 GWGSQIRSYVLDD-SRIKDLRTGVENSNTGAVLDGDLDKFIEASLKQ 349


>gi|53802400|ref|YP_112836.1| peptide chain release factor 2, programmed frameshift
           [Methylococcus capsulatus str. Bath]
 gi|53756161|gb|AAU90452.1| peptide chain release factor 2, programmed frameshift
           [Methylococcus capsulatus str. Bath]
          Length = 365

 Score =  289 bits (738), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 183/350 (52%), Positives = 243/350 (69%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + L G  D+D   +RL+ +  + EDP +W N   A+ L +ER  L+  ++ + EI
Sbjct: 14  LKSRQDALRGYLDFDTKQERLTEVLRELEDPRIWDNPERAQALGKERTQLEGVVNRLNEI 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + D   LL+LA+EEDD   ++  + +L   +  V   +F  + SGE D N+A+L++ 
Sbjct: 74  AAGIDDAAELLQLAVEEDDEDSVESVAADLAHYESVVAEMEFRRMFSGEMDPNNAFLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA ML RMY RW E++ FKTE +E   GE AGIKSAT+  +G  AYGWL+
Sbjct: 134 AGSGGTEAQDWAQMLERMYLRWGERKGFKTELVEESPGEVAGIKSATIRFEGEYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSFSS++V P +DD+I+I+I+ +D R D YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGNRRHTSFSSVFVSPEIDDNIDIDINPADLRTDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+PTG+VVQCQ +RSQH N+      LRAKLYELE+QKR       E S
Sbjct: 254 VNRTESAVRITHLPTGIVVQCQNQRSQHANRDWCMKQLRAKLYELEMQKRNTEKQKLEDS 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K++IGWG QIRSYVL     +KDLRTN+E  +P  VLDGDLD F++A+L 
Sbjct: 314 KSDIGWGSQIRSYVLD-QSRIKDLRTNVETGNPQAVLDGDLDMFIEASLK 362


>gi|312959346|ref|ZP_07773863.1| peptide chain release factor 2 (RF-2) [Pseudomonas fluorescens WH6]
 gi|311286063|gb|EFQ64627.1| peptide chain release factor 2 (RF-2) [Pseudomonas fluorescens WH6]
          Length = 430

 Score =  289 bits (738), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 184/345 (53%), Positives = 242/345 (70%), Gaps = 1/345 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD+D   +RL+ +N + EDP +W     A+ L RER  L   +  + E+   L 
Sbjct: 84  KLFGGIFDYDQKHERLTEVNRELEDPSVWNKPEYAQELGRERAALAQIVDTLDELNTGLA 143

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   LL++A+EEDD   + +    L R++  +   +F  + S E D N+AYL++ AG+GG
Sbjct: 144 DCRDLLDMAVEEDDEGAVGDVVAELARLEENLAKLEFRRMFSHEMDPNNAYLDIQAGSGG 203

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK AT+ IKG  A+GWL+ E GV
Sbjct: 204 TEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGV 263

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ +D RIDTYR+SGAGGQHVNTTD
Sbjct: 264 HRLVRKSPFDSGNRRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTD 323

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYE E+QKR   +   E +K++IG
Sbjct: 324 SAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRAKLYEQEMQKRNAASQALEDTKSDIG 383

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           WG QIRSYVL     +KDLRTNIE++    VLDGD+D++++A+L 
Sbjct: 384 WGHQIRSYVLD-ASRIKDLRTNIERSDCDKVLDGDIDEYLEASLK 427


>gi|257453984|ref|ZP_05619260.1| peptide chain release factor 2 [Enhydrobacter aerosaccus SK60]
 gi|257448649|gb|EEV23616.1| peptide chain release factor 2 [Enhydrobacter aerosaccus SK60]
          Length = 349

 Score =  289 bits (738), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 178/346 (51%), Positives = 241/346 (69%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD +   +RL  +N + E+P LW +   A  + +E+  LDN I  I  + D+L 
Sbjct: 3   TSFGGIFDIEAKQERLEEVNLELENPELWNDPERATKISKEKSQLDNVIGVITALDDKLE 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   +++LA+E DD ++L +    L   + +V   +F+ + SGE D N+ Y+++ +G+GG
Sbjct: 63  DAKAMIDLAVEADDATLLADVQAELDEAEAKVADLEFKRMFSGEMDGNNCYVDIQSGSGG 122

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDWA MLLRMY RW E   FK E +E+  G  AGIKSA++ +KG  A+GWL+ E GV
Sbjct: 123 TEAQDWAEMLLRMYLRWCESHGFKAEIMELSAGGVAGIKSASIHVKGDYAFGWLRTEIGV 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DSN+ RHTSF++++V P +DD+IEI+I+ +D RIDTYR+SGAGGQHVNTTD
Sbjct: 183 HRLVRKSPFDSNNGRHTSFAAVFVSPEIDDNIEIDINPADLRIDTYRSSGAGGQHVNTTD 242

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH PTG+VV CQ ERSQH NK  A  MLRAKLYE E+ +R E     E +K++IG
Sbjct: 243 SAVRITHQPTGIVVACQNERSQHANKDTAMKMLRAKLYEREMMQRMEKQQALEETKSDIG 302

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSYVL     +KDLRT +E ++   VLDGDLD F++A+L  
Sbjct: 303 WGSQIRSYVLDD-SRIKDLRTGVETSNTQAVLDGDLDKFIEASLKA 347


>gi|42784339|ref|NP_981586.1| peptide chain release factor 2 [Bacillus cereus ATCC 10987]
 gi|42740270|gb|AAS44194.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus ATCC 10987]
          Length = 380

 Score =  289 bits (738), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 171/353 (48%), Positives = 229/353 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L    G  D     ++++ L  K      W +   A+ ++ E   L + +   ++
Sbjct: 27  KMAKRLAAFRGSLDLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 86

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   +  I  EL  EE D  + +E    ++ +  E+   + + LLS   D N+A LE+
Sbjct: 87  LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAEKR FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P  +D +EIE+   D +IDTYRASGAGGQ
Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 266

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PT  VV CQ ERSQ KN+  A  ML+AKLY+ +L++++   +    
Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EIGWG QIRSYV  PY +VKD RTN E  +   V+DG++D F+ A L  +
Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379


>gi|304317582|ref|YP_003852727.1| hypothetical protein Tthe_2166 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779084|gb|ADL69643.1| hypothetical protein Tthe_2166 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 365

 Score =  289 bits (738), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 160/354 (45%), Positives = 237/354 (66%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           + L   +  +G   D +   + ++ ++ K  +P  W ++ +++ L ++ + L   IS  +
Sbjct: 10  LNLIDTIKEMGASLDIEGLKREVAEIDKKMAEPDFWNDLQKSQELSKKLKDLKELISEYE 69

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            I+    D   L+EL +EE D S+ QE  +  + +  ++   + ++LLSG  D N+A L 
Sbjct: 70  SIEKLCEDLNALIELGIEEGDESLSQEVHEEYKSLSKKINDMKIKTLLSGPYDRNNAILS 129

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +HAGAGGTE+QDW  MLLRMY RWA  + ++ E ++   G++AG+KS T+++KG  AYG+
Sbjct: 130 IHAGAGGTEAQDWTEMLLRMYMRWASSKNYEVETVDYLPGDDAGVKSVTIMVKGAFAYGY 189

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LKGE GVHRLVRISP+D+  RRHTSF+ + V P +DD I+++I   D +IDTYR+SGAGG
Sbjct: 190 LKGEAGVHRLVRISPFDAAGRRHTSFALVEVLPEIDDDIKVDIRPEDLKIDTYRSSGAGG 249

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVN T+SA+RITHIPTG++VQCQ ERSQ +N+  A  ML+AKL +L +++++E     +
Sbjct: 250 QHVNKTESAIRITHIPTGIIVQCQSERSQMQNRETAMKMLKAKLMDLMIKEQKEKIEDLK 309

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               E GWG QIRSYV QPY +VKD RTN E  + + V+DGD+D+F+ A L  K
Sbjct: 310 GEHKEAGWGNQIRSYVFQPYTLVKDHRTNFEVGNVNAVMDGDIDEFINAYLKQK 363


>gi|295697362|ref|YP_003590600.1| hypothetical protein Btus_2812 [Bacillus tusciae DSM 2912]
 gi|295412964|gb|ADG07456.1| hypothetical protein Btus_2812 [Bacillus tusciae DSM 2912]
          Length = 382

 Score =  289 bits (738), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 170/352 (48%), Positives = 235/352 (66%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L+ +G   D     ++++ +  +      W +   A+ ++ E   L + +  ++ +
Sbjct: 15  LVERLDEIGRSLDLAGKKKQIAGMEQRMAAADFWDDQEGAQKVIAEVNRLKDVVERVEGL 74

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L EL  EE D ++L E    + ++  ++   + E +LSG  D N+A +E+H
Sbjct: 75  RSRVEDLEVLWELGHEEGDETVLGEIEAGITQVHSQLGQFELELMLSGPYDRNNAIVELH 134

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDW  MLLRMYTRWAE R +K E L+   GEEAG+KS TLLIKG NAYG+LK
Sbjct: 135 PGAGGTESQDWTAMLLRMYTRWAESRGYKVETLDYLPGEEAGVKSVTLLIKGHNAYGYLK 194

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+D++ RRHTSF+S+ V P +D+S++++I   D +IDTYR+SGAGGQH
Sbjct: 195 AERGVHRLVRISPFDASGRRHTSFASVDVLPELDESVDVDIRPEDLKIDTYRSSGAGGQH 254

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV CQ ERSQ KN+A A  +L A+LYE   +++EE        
Sbjct: 255 VNTTDSAVRITHIPTGIVVTCQSERSQIKNRATAMKILAARLYERRRREQEEQIAALRGE 314

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + EI WG QIRSYV  PY MVKD RT +E  +   V+DGD+D F+ A L  +
Sbjct: 315 QKEIAWGSQIRSYVFHPYSMVKDHRTGVETGNVQAVMDGDIDAFIDAWLRQR 366


>gi|124267958|ref|YP_001021962.1| peptide chain release factor 2 [Methylibium petroleiphilum PM1]
 gi|124260733|gb|ABM95727.1| bacterial peptide chain release factor 2 (bRF-2) [Methylibium
           petroleiphilum PM1]
          Length = 355

 Score =  289 bits (738), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 170/343 (49%), Positives = 238/343 (69%), Gaps = 1/343 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RLS +N   EDP +W +   A+ L RE++ L+  +  I  ++  L DN 
Sbjct: 12  GGIFDYDEKSRRLSEVNAALEDPTVWNDPKNAQALGREKKSLETVVDTIASLERNLADNA 71

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L E++ EE D   L+        +  +VE  +F  + S  AD ++ ++++ AGAGGTE+
Sbjct: 72  ELYEMSKEEGDEDGLRAIEAETLGLAAQVEQLEFRRMFSNPADPSNCFIDIQAGAGGTEA 131

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA+MLLR Y ++ E++ FK    +  +G+ AGIKSAT+ ++G  A+G L+ E GVHRL
Sbjct: 132 CDWASMLLRQYLKYCERKGFKATIEDETEGDTAGIKSATIKVEGDYAFGHLRTETGVHRL 191

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS+  RHTSF+S++VYP VDDSIEIEI+ +D R DT+RASGAGGQH+N TDSAV
Sbjct: 192 VRKSPFDSSGGRHTSFASLFVYPEVDDSIEIEINPADVRTDTFRASGAGGQHINKTDSAV 251

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+ E++KR+E     E +KT++GWG 
Sbjct: 252 RLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDHEMRKRQEEQQKLEDTKTDVGWGH 311

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 312 QIRSYVLD-NSRIKDLRTNVEISNTQKVLDGDLDAFIEASLKQ 353


>gi|296533603|ref|ZP_06896168.1| peptide chain release factor RF2 [Roseomonas cervicalis ATCC 49957]
 gi|296266065|gb|EFH12125.1| peptide chain release factor RF2 [Roseomonas cervicalis ATCC 49957]
          Length = 376

 Score =  289 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 199/353 (56%), Positives = 259/353 (73%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   +  L    DWD A++RL  +N + EDP LW+   EA+ +MRER  L + +  +K+
Sbjct: 11  QIEDSIALLRRHLDWDVALRRLDEVNARAEDPTLWEKPDEAQAVMRERNRLADQVEGVKK 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  + D L L+ELA  E D +       +L     E + ++ ESLLSGEAD  D ++EV
Sbjct: 71  LEQDVKDALELIELAEAEGDGATADAAIADLHSFAAEAKRREIESLLSGEADMRDCFVEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTE+QDWA MLLRMY RWAEKR +K +  E  +GE+AGIKSAT+ + GPNAYGWL
Sbjct: 131 NAGAGGTEAQDWAQMLLRMYQRWAEKRGYKVQLTEESEGEQAGIKSATIQVTGPNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+ +RR TSF+S++V+PV+DD IEIEI+ +D + DT+RASGAGGQ
Sbjct: 191 KTESGVHRLVRISPFDAAARRQTSFASVYVFPVIDDKIEIEINPADLKTDTFRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+S VR THIPTG+V    Q+RSQH+N+  A  ML+A+LYELEL+KREEI    E+
Sbjct: 251 HVNKTESGVRFTHIPTGIVAASTQDRSQHRNRVIAMEMLKARLYELELRKREEITAGIEA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            KT+IGWG QIRSYVL PYQ+VKDLRTN+EK +P  VLDG+LDDFM A LA +
Sbjct: 311 GKTDIGWGHQIRSYVLAPYQLVKDLRTNVEKGNPDAVLDGELDDFMAAALASR 363


>gi|119384552|ref|YP_915608.1| peptide chain release factor 2 [Paracoccus denitrificans PD1222]
 gi|119374319|gb|ABL69912.1| bacterial peptide chain release factor 2 (bRF-2) [Paracoccus
           denitrificans PD1222]
          Length = 402

 Score =  289 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 199/352 (56%), Positives = 244/352 (69%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  LG   DW+ A  RL  LN   E   +W +   A+ LMR+RQ L +A+   + I
Sbjct: 39  IRKSLKLLGQRMDWETAPHRLEELNAMIEAGDIWSDQARAQKLMRDRQMLSDAVETYRRI 98

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L DN  L+EL   E D  I+ +    L+ +      K+ E+LL+GEAD ND +LE++
Sbjct: 99  ESELKDNAELIELGEAEGDDEIVADAEAALKSLAELAAQKELEALLNGEADGNDTFLEIN 158

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMY RWAEK+ +  E L    GEEAGI+SA   I GPNAYGWLK
Sbjct: 159 AGAGGTESADWASMLARMYVRWAEKKGYSVELLSETPGEEAGIRSAAYKISGPNAYGWLK 218

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEI I +++ RIDTYR+SGAGGQH
Sbjct: 219 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEITIPDNEIRIDTYRSSGAGGQH 278

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV    E+SQH+N+A A   L+A+LY+LEL KR    N    +
Sbjct: 279 VNTTDSAVRITHLPTGIVVTSS-EKSQHQNRANAMAALKARLYQLELDKRNAAINAQHEA 337

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K + GWG QIRSYVL PYQMVKDLRT  E +    VLDG LD FM ATLA+ 
Sbjct: 338 KGDAGWGNQIRSYVLHPYQMVKDLRTGHETSDTQGVLDGALDAFMAATLALD 389


>gi|71065379|ref|YP_264106.1| peptide chain release factor 2 [Psychrobacter arcticus 273-4]
 gi|71038364|gb|AAZ18672.1| bacterial peptide chain release factor 2 (bRF-2) [Psychrobacter
           arcticus 273-4]
          Length = 349

 Score =  289 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 185/343 (53%), Positives = 242/343 (70%), Gaps = 1/343 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RL  +N + E+P LW +   A  + +E+  LD  I  +  ++  L D  
Sbjct: 6   GGIFDFDGKQERLEEVNLELENPELWNDPERATKINKEKSQLDGVIDVVVSLETTLEDAS 65

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            +LELA+EE+D S+L +    L   +  V   +F  + SGE D N+ YL++ +G+GGTE+
Sbjct: 66  AMLELAVEEEDESLLADVQAELDNAEKRVADLEFRRMFSGEMDPNNCYLDIQSGSGGTEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRWAE   FK + +E+  G  AGIKSAT+ IKG  A+GWL+ E GVHRL
Sbjct: 126 QDWAEMLLRMYTRWAEAHGFKVDVIEVSAGGVAGIKSATIEIKGDYAFGWLRTEIGVHRL 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DSN+ RHTSF++++V P +DD+IEI+++ +D RIDTYR+SGAGGQHVNTTDSAV
Sbjct: 186 VRKSPFDSNNGRHTSFAAVFVSPEIDDNIEIDVNPADLRIDTYRSSGAGGQHVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH P+GVVV CQ ERSQH NKA A  MLRAKLYELE+QKR E     E  K+++GWG 
Sbjct: 246 RITHEPSGVVVTCQNERSQHGNKATAMKMLRAKLYELEMQKRMESQQAVEDGKSDVGWGS 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 306 QIRSYVLDD-SRIKDLRTGVETFNTGAVLDGDLDQFIEASLKA 347


>gi|147569|gb|AAA24520.1| peptide chain release factor 2 [Escherichia coli]
          Length = 365

 Score =  288 bits (737), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 183/351 (52%), Positives = 237/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHR+VR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YR SGAGGQH
Sbjct: 194 TETGVHRVVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRTSGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|89072535|ref|ZP_01159107.1| putative peptide chain release factor 2 [Photobacterium sp. SKA34]
 gi|89051639|gb|EAR57092.1| putative peptide chain release factor 2 [Photobacterium sp. SKA34]
          Length = 353

 Score =  288 bits (737), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 178/343 (51%), Positives = 238/343 (69%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  I  +   + D 
Sbjct: 9   LGGTFDYDAKKERLEEVNAELEQPDVWNEPDRAQALGKERSSLEAVVETIDLLDQGVEDV 68

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+EE+D     E    L  ++ ++   +F  + +G+ D++D YL++ AG+GGTE
Sbjct: 69  EGLLELAVEENDQETFDEIEPELAELEAKLAKLEFRRMFAGDHDASDCYLDLQAGSGGTE 128

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW +M+LRMY RWA+ + FKTE +EI DG+ AG+KS T+ I G  AYGWL+ E GVHR
Sbjct: 129 AQDWTSMMLRMYLRWADAKGFKTEIIEISDGDVAGLKSVTVRISGEYAYGWLRTETGVHR 188

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS  RRHTSF+S +VYP +DD+I I+I+ SD RID YRASGAGGQHVNTT+SA
Sbjct: 189 LVRKSPFDSGGRRHTSFASAFVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTTESA 248

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT +VVQCQ +RSQHKNK QA   L+AKL+E E+QK+       E +K++IGWG
Sbjct: 249 VRITHLPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEYEMQKQNAEKQASEDTKSDIGWG 308

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 309 SQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLK 350


>gi|206578228|ref|YP_002236652.1| peptide chain release factor 2 [Klebsiella pneumoniae 342]
 gi|288933629|ref|YP_003437688.1| hypothetical protein Kvar_0746 [Klebsiella variicola At-22]
 gi|238054482|sp|B5XUF3|RF2_KLEP3 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|206567286|gb|ACI09062.1| peptide chain release factor 2 [Klebsiella pneumoniae 342]
 gi|288888358|gb|ADC56676.1| hypothetical protein Kvar_0746 [Klebsiella variicola At-22]
          Length = 365

 Score =  288 bits (737), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 184/351 (52%), Positives = 238/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+E +D     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  SQGLEDVAGLLELAVEAEDEETFNEAVAELDGLEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML+RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKIIGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|16130793|ref|NP_417367.1| peptide chain release factor RF-2 [Escherichia coli str. K-12
           substr. MG1655]
 gi|89109670|ref|AP_003450.1| peptide chain release factor RF-2 [Escherichia coli str. K-12
           substr. W3110]
 gi|170082452|ref|YP_001731772.1| peptide chain release factor RF-2 [Escherichia coli str. K-12
           substr. DH10B]
 gi|238902016|ref|YP_002927812.1| peptide chain release factor RF-2 [Escherichia coli BW2952]
 gi|2507293|sp|P07012|RF2_ECOLI RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|229576667|sp|B1XEH8|RF2_ECODH RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|259585244|sp|C5A0G3|RF2_ECOBW RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|28373696|pdb|1ML5|Z Chain Z, Structure Of The E. Coli Ribosomal Termination Complex
           With Release Factor 2
 gi|2367172|gb|AAC75929.1| peptide chain release factor RF-2 [Escherichia coli str. K-12
           substr. MG1655]
 gi|85675703|dbj|BAE76956.1| peptide chain release factor RF-2 [Escherichia coli str. K12
           substr. W3110]
 gi|169890287|gb|ACB03994.1| peptide chain release factor RF-2 [Escherichia coli str. K-12
           substr. DH10B]
 gi|238861985|gb|ACR63983.1| peptide chain release factor RF-2 [Escherichia coli BW2952]
 gi|260448063|gb|ACX38485.1| hypothetical protein EcDH1_0801 [Escherichia coli DH1]
 gi|315137490|dbj|BAJ44649.1| peptide chain release factor RF-2 [Escherichia coli DH1]
 gi|228558|prf||1806195A peptide chain-releasing factor:ISOTYPE=2
          Length = 365

 Score =  288 bits (737), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 184/351 (52%), Positives = 237/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YR SGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRTSGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|15833017|ref|NP_311790.1| peptide chain release factor 2 [Escherichia coli O157:H7 str.
           Sakai]
 gi|26249306|ref|NP_755346.1| peptide chain release factor 2 [Escherichia coli CFT073]
 gi|30064203|ref|NP_838374.1| peptide chain release factor 2 [Shigella flexneri 2a str. 2457T]
 gi|170018863|ref|YP_001723817.1| peptide chain release factor 2 [Escherichia coli ATCC 8739]
 gi|170682178|ref|YP_001745044.1| peptide chain release factor 2 [Escherichia coli SMS-3-5]
 gi|215488191|ref|YP_002330622.1| peptide chain release factor 2 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218550138|ref|YP_002383929.1| peptide chain release factor 2 [Escherichia fergusonii ATCC 35469]
 gi|218559884|ref|YP_002392797.1| peptide chain release factor 2 [Escherichia coli S88]
 gi|218691016|ref|YP_002399228.1| peptide chain release factor 2 [Escherichia coli ED1a]
 gi|218696486|ref|YP_002404153.1| peptide chain release factor 2 [Escherichia coli 55989]
 gi|218701600|ref|YP_002409229.1| peptide chain release factor 2 [Escherichia coli IAI39]
 gi|218706397|ref|YP_002413916.1| peptide chain release factor 2 [Escherichia coli UMN026]
 gi|253772268|ref|YP_003035099.1| peptide chain release factor 2 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254162803|ref|YP_003045911.1| peptide chain release factor 2 [Escherichia coli B str. REL606]
 gi|260845559|ref|YP_003223337.1| peptide chain release factor RF-2 [Escherichia coli O103:H2 str.
           12009]
 gi|260857014|ref|YP_003230905.1| peptide chain release factor RF-2 [Escherichia coli O26:H11 str.
           11368]
 gi|260869568|ref|YP_003235970.1| peptide chain release factor RF-2 [Escherichia coli O111:H- str.
           11128]
 gi|54039052|sp|P66024|RF2_ECO57 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|54039053|sp|P66025|RF2_SHIFL RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|54041596|sp|P66023|RF2_ECOL6 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|189040000|sp|B1ITB1|RF2_ECOLC RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|226739125|sp|B7MM78|RF2_ECO45 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|226739126|sp|B7NW32|RF2_ECO7I RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|226739128|sp|B7N7D5|RF2_ECOLU RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|226739129|sp|B1LR73|RF2_ECOSM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|226739130|sp|B7LPA4|RF2_ESCF3 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|254790914|sp|B7UHU0|RF2_ECO27 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|254790915|sp|B7LF76|RF2_ECO55 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|254790916|sp|B7MZI9|RF2_ECO81 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|26109714|gb|AAN81919.1|AE016766_7 Peptide chain release factor 2 [Escherichia coli CFT073]
 gi|13363235|dbj|BAB37186.1| peptide chain release factor RF-2 [Escherichia coli O157:H7 str.
           Sakai]
 gi|30042460|gb|AAP18184.1| peptide chain release factor RF-2 [Shigella flexneri 2a str. 2457T]
 gi|169753791|gb|ACA76490.1| hypothetical protein EcolC_0818 [Escherichia coli ATCC 8739]
 gi|170519896|gb|ACB18074.1| peptide chain release factor 2 [Escherichia coli SMS-3-5]
 gi|215266263|emb|CAS10692.1| peptide chain release factor RF-2 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218353218|emb|CAU99134.1| peptide chain release factor RF-2 [Escherichia coli 55989]
 gi|218357679|emb|CAQ90320.2| peptide chain release factor RF-2 [Escherichia fergusonii ATCC
           35469]
 gi|218366653|emb|CAR04407.2| peptide chain release factor RF-2 [Escherichia coli S88]
 gi|218371586|emb|CAR19425.2| peptide chain release factor RF-2 [Escherichia coli IAI39]
 gi|218428580|emb|CAR09507.2| peptide chain release factor RF-2 [Escherichia coli ED1a]
 gi|218433494|emb|CAR14397.2| peptide chain release factor RF-2 [Escherichia coli UMN026]
 gi|253323312|gb|ACT27914.1| hypothetical protein ECBD_0846 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253974704|gb|ACT40375.1| peptide chain release factor 2 [Escherichia coli B str. REL606]
 gi|253978870|gb|ACT44540.1| peptide chain release factor 2 [Escherichia coli BL21(DE3)]
 gi|257755663|dbj|BAI27165.1| peptide chain release factor RF-2 [Escherichia coli O26:H11 str.
           11368]
 gi|257760706|dbj|BAI32203.1| peptide chain release factor RF-2 [Escherichia coli O103:H2 str.
           12009]
 gi|257765924|dbj|BAI37419.1| peptide chain release factor RF-2 [Escherichia coli O111:H- str.
           11128]
 gi|309703251|emb|CBJ02586.1| peptide chain release factor 2 (RF-2) [Escherichia coli ETEC
           H10407]
 gi|313848742|emb|CAQ33203.2| peptide chain release factor RF2 [Escherichia coli BL21(DE3)]
 gi|323377221|gb|ADX49489.1| Peptide chain release factor 2 [Escherichia coli KO11]
          Length = 365

 Score =  288 bits (737), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 185/351 (52%), Positives = 238/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|308535208|ref|YP_002137819.2| peptide chain release factor 2 [Geobacter bemidjiensis Bem]
 gi|308052553|gb|ACH38023.2| peptide chain release factor 2 [Geobacter bemidjiensis Bem]
          Length = 371

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 175/352 (49%), Positives = 243/352 (69%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ +++ L G  + D+  +R+  L   T  P  W +   A+ ++R R  ++  ++  + 
Sbjct: 11  ELTERIDKLRGSLEVDDKKERMQELEELTSRPDFWNDAENAQKVLRSRTAMEKDVTTWES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  +  D   L+EL  EE D + L E +    +++  V   +F  +LSG  D++ A++ +
Sbjct: 71  LDKQARDIKELIELGSEEQDEATLAEVAAMNAQLETGVSQAEFRRMLSGPHDASGAFVSI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTESQDWA MLLRMY R+ EK+ +KTE  +  +G+ AG+K  T  + G  AYG+L
Sbjct: 131 NSGAGGTESQDWAEMLLRMYLRYCEKKGWKTEITDYQEGDGAGVKGVTFAVTGEFAYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGG 240
           K E G+HRLVRISP+DS++RRHTSF+S +V+P + ++ IEI+I+ESD RIDTYR+SGAGG
Sbjct: 191 KAEAGIHRLVRISPFDSSARRHTSFASAFVFPVIEEEDIEIKIAESDLRIDTYRSSGAGG 250

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVNTTDSA+RITHIPTG VV CQ ERSQH NKA A  +LR+KLYE+EL++RE  A+   
Sbjct: 251 QHVNTTDSAIRITHIPTGTVVACQSERSQHMNKATAMKVLRSKLYEMELREREAKASDIA 310

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             K EIGWG QIRSYVL PY+MVKDLRT +E  +P  VLDG LDDF+   L 
Sbjct: 311 GEKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGSLDDFVVPYLM 362


>gi|251799706|ref|YP_003014437.1| hypothetical protein Pjdr2_5745 [Paenibacillus sp. JDR-2]
 gi|247547332|gb|ACT04351.1| hypothetical protein Pjdr2_5745 [Paenibacillus sp. JDR-2]
          Length = 368

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 169/353 (47%), Positives = 234/353 (66%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +++++L  L G  D D  ++ ++    K   P  W +  +A+ ++ E   + + +   + 
Sbjct: 12  EVAKRLQELRGSLDLDLKLEHIANFEEKMTAPDFWDDNTKAQGIISELNAIKSVVEHYER 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +     D   L+ELA EE D S+  E    +  +  +V   + + LL+   D  +A LE+
Sbjct: 72  LNADCEDLQTLIELADEESDDSLEAEVIGGIASLNEKVNGFELQLLLNQPYDKLNAILEL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA ML RMYTRWAEKR FK E L+  DG+EAGIKS T+ +KG NAYG+L
Sbjct: 132 HPGAGGTESQDWAQMLYRMYTRWAEKRGFKVEVLDYLDGDEAGIKSVTIAVKGYNAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P + + IE+EI   D ++DTYRASGAGGQ
Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFVSCDVVPEITEDIEVEIRTEDLKVDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SA+RITHIPTG+VV CQQERSQ +N+ +A NMLR+KLYE +++++++       
Sbjct: 252 HVNKTESAIRITHIPTGIVVACQQERSQIQNRERAMNMLRSKLYERKIEEQQKHLAEIRG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +++I WG QIRSYV  PY MVKD RT++E  +   V+DGDLD F+   L  +
Sbjct: 312 EQSDIAWGSQIRSYVFHPYSMVKDHRTSVETGNVGAVMDGDLDAFIDGYLRSQ 364


>gi|317049377|ref|YP_004117025.1| hypothetical protein Pat9b_3172 [Pantoea sp. At-9b]
 gi|316950994|gb|ADU70469.1| hypothetical protein Pat9b_3172 [Pantoea sp. At-9b]
          Length = 365

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 182/351 (51%), Positives = 240/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEIIVGTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+E DD     ET   L  ++ ++   +F  + SGE DS D Y+++ 
Sbjct: 74  YQGLEDVQGLLELAVEADDEETFNETIAELDGLETKLGELEFRRMFSGEYDSADCYIDLQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E  +GE AG+KSAT+ + G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGLKSATIRVSGEYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS ++YP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAAEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDRFIEASLKA 363


>gi|311278189|ref|YP_003940420.1| Peptide chain release factor 2 [Enterobacter cloacae SCF1]
 gi|308747384|gb|ADO47136.1| Peptide chain release factor 2 [Enterobacter cloacae SCF1]
          Length = 365

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 185/351 (52%), Positives = 239/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLNQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  AQGLEDVSGLLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  +GE AG+KSAT+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGLKSATIKISGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIP+G+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPSGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDT 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|227513676|ref|ZP_03943725.1| peptide chain release factor 2 [Lactobacillus buchneri ATCC 11577]
 gi|227524821|ref|ZP_03954870.1| peptide chain release factor 2 [Lactobacillus hilgardii ATCC 8290]
 gi|227083087|gb|EEI18399.1| peptide chain release factor 2 [Lactobacillus buchneri ATCC 11577]
 gi|227088036|gb|EEI23348.1| peptide chain release factor 2 [Lactobacillus hilgardii ATCC 8290]
          Length = 354

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 172/345 (49%), Positives = 225/345 (65%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGGLFD+D   + +S    K  +P  W +   A+ ++ E   L         +   L D 
Sbjct: 3   LGGLFDFDALSESISINEAKMAEPGFWDDQQAAQKMIDETNQLKTKRDRFNTLTKELDDL 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
            + LEL  E+ D  +  E      ++K +++  Q   LL+G+ D N+A LE+H GAGGTE
Sbjct: 63  KVTLELISEDPDSGMQDEFIGEADKLKKQLDRYQLGLLLNGKYDHNNAILEIHPGAGGTE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW +MLLRMYTRWAE   FK + L+   GE AGI S ++LI G NAYG+L+ E+GVHR
Sbjct: 123 AQDWGSMLLRMYTRWAESHNFKVDVLDYQVGEVAGINSVSILISGENAYGYLRSEKGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+DS  RRHTSF+S+ V P +DD + I+IS  + ++D YRASGAGGQHVN T SA
Sbjct: 183 LVRISPFDSAGRRHTSFASVDVMPELDDDVSIKISPDELKVDVYRASGAGGQHVNKTSSA 242

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG+VV  Q +RSQ +N+  A NML++KLYELE QK+ E     E  + +IGWG
Sbjct: 243 VRITHIPTGIVVASQAQRSQLQNRQTALNMLKSKLYELEEQKKAEEKAKIEGEQLDIGWG 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            QIRSYV  PY MVKD RTN E  + + V+DGDLD F+ A L  +
Sbjct: 303 SQIRSYVFHPYSMVKDHRTNYETANVNGVMDGDLDPFINAYLQWQ 347


>gi|226328243|ref|ZP_03803761.1| hypothetical protein PROPEN_02136 [Proteus penneri ATCC 35198]
 gi|225202976|gb|EEG85330.1| hypothetical protein PROPEN_02136 [Proteus penneri ATCC 35198]
          Length = 347

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 186/343 (54%), Positives = 240/343 (69%), Gaps = 1/343 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++   L D  
Sbjct: 4   GGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVETIDQLDQGLEDVS 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LLELA+E DD     E    L  +  ++E  +F  + SGE DS D YL++ AG+GGTE+
Sbjct: 64  GLLELAVEADDEETFNEAIAELDVLNKKLEQLEFRRMFSGEYDSADCYLDLQAGSGGTEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA+ML+RMY RWAE R FKTE +E  DG+ AG+KSAT+ I G  AYGWL+ E GVHRL
Sbjct: 124 QDWASMLMRMYLRWAESRGFKTEIIEESDGDVAGLKSATIKIIGEYAYGWLRTETGVHRL 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS  RRHTSFSS ++YP VDD+I+IEI+ +D RID YRASGAGGQHVN T+SAV
Sbjct: 184 VRKSPFDSGGRRHTSFSSAFIYPEVDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH+PTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+     + E +K++IGWG 
Sbjct: 244 RITHVPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNADKQVMEDNKSDIGWGS 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 304 QIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 345


>gi|242240700|ref|YP_002988881.1| hypothetical protein Dd703_3297 [Dickeya dadantii Ech703]
 gi|242132757|gb|ACS87059.1| hypothetical protein Dd703_3297 [Dickeya dadantii Ech703]
          Length = 365

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 188/351 (53%), Positives = 241/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  I+++
Sbjct: 14  LSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPDRAQALGKERSSLEMIVDTIEQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LL+LA+EEDD     ET   L +++ ++   +F  + SGE DS D Y+++ 
Sbjct: 74  NQGLEDVTGLLDLAVEEDDEETFNETIIELDQLENKLGQLEFRRMFSGEYDSADCYIDLQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  +GE AGIKSAT+ + G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAESKGFKTEVIEESEGEVAGIKSATIKVVGEYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE ELQK+       E +
Sbjct: 254 VNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMRQLKAKLYEFELQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQSVLDGDLDKFIEASLKA 363


>gi|90580579|ref|ZP_01236384.1| putative peptide chain release factor 2 [Vibrio angustum S14]
 gi|90438237|gb|EAS63423.1| putative peptide chain release factor 2 [Photobacterium angustum
           S14]
          Length = 353

 Score =  288 bits (736), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 178/343 (51%), Positives = 238/343 (69%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  I  +   + D 
Sbjct: 9   LGGTFDYDAKKERLEEVNAELEQPDVWNEPDRAQALGKERASLEAVVETIDLLDQGVEDV 68

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+EE+D     E    L  ++ ++   +F  + +G+ D++D YL++ AG+GGTE
Sbjct: 69  EGLLELAVEENDQETFDEIEPELAELEAKLAKLEFRRMFAGDHDASDCYLDLQAGSGGTE 128

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW +M+LRMY RWA+ + FKTE +EI DG+ AG+KS T+ I G  AYGWL+ E GVHR
Sbjct: 129 AQDWTSMMLRMYLRWADAKGFKTEIIEISDGDVAGLKSVTVRISGEYAYGWLRTETGVHR 188

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS  RRHTSF+S +VYP +DD+I I+I+ SD RID YRASGAGGQHVNTT+SA
Sbjct: 189 LVRKSPFDSGGRRHTSFASAFVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTTESA 248

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT +VVQCQ +RSQHKNK QA   L+AKL+E E+QK+       E +K++IGWG
Sbjct: 249 VRITHLPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEYEMQKQNAEKQASEDTKSDIGWG 308

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 309 SQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLK 350


>gi|289208167|ref|YP_003460233.1| hypothetical protein TK90_0982 [Thioalkalivibrio sp. K90mix]
 gi|288943798|gb|ADC71497.1| conserved hypothetical protein [Thioalkalivibrio sp. K90mix]
          Length = 364

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 180/350 (51%), Positives = 243/350 (69%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L      LGG+FD+    +RL  +  + E+P +W +   A+ L +ER  L+N +  I+EI
Sbjct: 13  LKAAWKALGGIFDYPVKEERLEEVQRELENPDIWNDPDRAQALGKERAQLENIVVNIREI 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +L D+  LLE+A  +DD         +++ +   VE  +F  + SG+ D  +AYL++ 
Sbjct: 73  GTQLDDSRDLLEMAEADDDAETASAVEADVEALTARVEALEFRRMFSGDMDEANAYLDIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWAN+LLRMY RWAE   FKTE +E+ +GE AGIKSAT+ I+G  A+GWL+
Sbjct: 133 AGSGGTEAQDWANILLRMYLRWAEAHGFKTEIIELSEGEVAGIKSATVRIEGEYAFGWLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSF+S++  P VDDS EIEI+ +D R+DTYRASGAGGQH
Sbjct: 193 TETGVHRLVRKSPFDSGNRRHTSFASVFASPEVDDSFEIEINPADLRVDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+RITH P+G+VV CQ +RSQHKN+  A   L+AKLYE+E+QKR       E +
Sbjct: 253 VNRTESAIRITHEPSGIVVACQNDRSQHKNRDTAMKQLKAKLYEMEIQKRNAEKQAAEDA 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 313 KSDIGWGSQIRSYVLD-QSRIKDLRTGVEVGNTQAVLDGDLDQFIEASLK 361


>gi|319427481|gb|ADV55555.1| peptide chain release factor 2, PrfB [Shewanella putrefaciens 200]
          Length = 365

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 171/351 (48%), Positives = 233/351 (66%), Gaps = 1/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ +   L G  D+D   +RL  +  + E   +W     A+ L +ER  L+  +  I +
Sbjct: 13  ELAERTQLLRGYLDYDAKHERLEEVTRELESSDVWNEPERAQALGKERASLEAVVKTIDD 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+EE+D     ET+  L  ++  +   +F  + SG  D+++ YL++
Sbjct: 73  MDSGLEDVEGLLELAVEEEDEDTFNETTKELDYLESRLADLEFRRMFSGPQDASNCYLDI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GGTE+QDWANM+LRMY RW E   F  E +E+ DG+ AGIK AT+   G  A+GWL
Sbjct: 133 QSGSGGTEAQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS+ RRHTSF S++VYP +DD I I+I+ +D RID YRASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPADLRIDVYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITH+PT  VVQCQ +RSQHKNK  A   L+AKL+ELE+ K+       E 
Sbjct: 253 HVNRTESAVRITHLPTNTVVQCQNDRSQHKNKDSAMKQLKAKLFELEMHKQNAEKQAAED 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K++IGWG QIRSYVL     +KDLRT++E  +   VLDGDLD F++A+L 
Sbjct: 313 AKSDIGWGSQIRSYVLDD-SRIKDLRTSVETRNTQAVLDGDLDKFIEASLK 362


>gi|308187994|ref|YP_003932125.1| Peptide chain release factor 2 (RF-2) [Pantoea vagans C9-1]
 gi|308058504|gb|ADO10676.1| Peptide chain release factor 2 (RF-2) [Pantoea vagans C9-1]
          Length = 351

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 179/344 (52%), Positives = 237/344 (68%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  ++++   L D 
Sbjct: 7   FGGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVQTLEQMSQGLEDV 66

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+E +D     E    L  ++ ++   +F  + SGE DS D Y+++ AG+GGTE
Sbjct: 67  QGLLELAVEAEDEETFNEAVAELDVLEGKLGELEFRRMFSGEYDSADCYIDLQAGSGGTE 126

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA+ML+RMY RWAE + FKTE +E  +GE AGIKS T+ + G  A+GWL+ E GVHR
Sbjct: 127 AQDWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAFGWLRTETGVHR 186

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS  RRHTSFSS ++YP VDD I+I+I+ +D RID YRASGAGGQHVN T+SA
Sbjct: 187 LVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESA 246

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG
Sbjct: 247 VRITHIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQALEDNKSDIGWG 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 307 SQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDRFIEASLKA 349


>gi|258512512|ref|YP_003185946.1| hypothetical protein Aaci_2552 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257479238|gb|ACV59557.1| conserved hypothetical protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 383

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 169/353 (47%), Positives = 235/353 (66%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++ +L   G   D      R++ L      P  W +   A+ ++ E   + + +  ++ +
Sbjct: 15  MATRLADFGRSLDVAGKEHRIATLEALMAAPDFWDDPDRAQKIIAEMNGVKSVVDTMRRL 74

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D  + L+LA EEDD  +  E +   +++K E++  + + +LSGE D N+A LE+H
Sbjct: 75  ESLLQDAEVALQLAQEEDDHDLFAEANRLAEQLKSEMDEFELQLMLSGEYDKNNAILELH 134

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+MLLRMYTRWAE   +K E L+   GEEAGIKS TLL+KG NAYG+LK
Sbjct: 135 PGAGGTESQDWASMLLRMYTRWAEDHGYKVEVLDYLPGEEAGIKSVTLLVKGHNAYGYLK 194

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQ 241
            E+GVHRLVRISP+D++ RRHTSF+S+ V P + +D   IEI   + RIDTYR++GAGGQ
Sbjct: 195 AEKGVHRLVRISPFDASGRRHTSFASVDVIPEIAEDDDSIEIRPEELRIDTYRSTGAGGQ 254

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG+VV CQ ERSQ +N+A+A  +L+++L     ++RE+       
Sbjct: 255 HVNTTDSAVRITHIPTGIVVTCQSERSQIQNRARAMEILKSRLAAKRREEREQELAQLRG 314

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EI WG QIRSYV  PY +VKD RTN E ++   V+DG++D F+ A L  +
Sbjct: 315 EQKEIAWGSQIRSYVFHPYSLVKDHRTNYETSNTQAVMDGEIDPFIHAYLRWQ 367


>gi|238787318|ref|ZP_04631117.1| Peptide chain release factor 2 [Yersinia frederiksenii ATCC 33641]
 gi|238724580|gb|EEQ16221.1| Peptide chain release factor 2 [Yersinia frederiksenii ATCC 33641]
          Length = 347

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 183/343 (53%), Positives = 237/343 (69%), Gaps = 1/343 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RL  +N + E P +W     A+ L +ER  L+  ++ I ++   + D  
Sbjct: 4   GGIFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSALEEIVTTIDQLDQGMEDVS 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LLELA+E DD     E    L  +  ++   +F  + SGE DS + YL++ AG+GGTE+
Sbjct: 64  GLLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQAGSGGTEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA+MLLRMY RWAE + FKTE +E  DG+ AG+KSAT+ I G  A+GWL+ E GVHRL
Sbjct: 124 QDWASMLLRMYLRWAEAKGFKTEIIEESDGDVAGLKSATIKIIGDYAFGWLRTETGVHRL 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAV
Sbjct: 184 VRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E +K++IGWG 
Sbjct: 244 RITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDNKSDIGWGS 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 304 QIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 345


>gi|300214843|gb|ADJ79259.1| Bacterial Peptide Chain Release Factor 2 [Lactobacillus salivarius
           CECT 5713]
          Length = 355

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 165/347 (47%), Positives = 230/347 (66%), Gaps = 1/347 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGGLFD D   ++++    +  +P  W +  +A+ ++ E   L        E+ + + D
Sbjct: 2   NLGGLFDLDALEEKIAENEARMAEPGFWDDQEKAQEVIAENNDLKAKFETFHELAESISD 61

Query: 69  NLI-LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             + L  L    DD  +  +  +N Q  +  ++  Q   LLS + D N+A LE+H GAGG
Sbjct: 62  LEVSLELLQEIPDDEELQADLEENYQHAEKLLQSYQLNMLLSEKYDKNNAILEIHPGAGG 121

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TESQDW +MLLRMYTRWA +  FK E ++   G++AGIKS TL+I+G NAYG+L+ E+GV
Sbjct: 122 TESQDWGSMLLRMYTRWASQHDFKVETVDYQPGDDAGIKSVTLMIEGKNAYGYLRSERGV 181

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVRISP+DS  RRHTSF+S+ V P +DDS+E+E+   D +++ +RASGAGGQH+N T 
Sbjct: 182 HRLVRISPFDSAGRRHTSFASVNVMPELDDSVEVELRPEDIKMEVFRASGAGGQHINKTS 241

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+ HIPTG+VV  Q +RSQ +N+A A NMLRAKLY+LE++++E+     +  + +IG
Sbjct: 242 SAVRLIHIPTGIVVSSQAQRSQFQNRATAENMLRAKLYQLEMEEKEKQRAAIQGEQLDIG 301

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYV  PY MVKD RT+ E  +   V+DGDLD F+ A L  K
Sbjct: 302 WGSQIRSYVFHPYSMVKDHRTDYETGNIQAVMDGDLDPFINAYLQWK 348


>gi|73540774|ref|YP_295294.1| peptide chain release factor 2 [Ralstonia eutropha JMP134]
 gi|72118187|gb|AAZ60450.1| bacterial peptide chain release factor 2 (bRF-2) [Ralstonia
           eutropha JMP134]
          Length = 357

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 176/346 (50%), Positives = 248/346 (71%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD+D  V RL  +N   EDP +W N   A+ L +E++ L+  +S + ++ D L 
Sbjct: 11  KIYGGIFDYDVKVGRLEEVNGLLEDPDVWNNPKRAQDLGKEKKALEGVVSVLGKLTDDLN 70

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
               L ELA EE D   L+    +++  +  V   +F  + +GE D  +A++++ AGAGG
Sbjct: 71  GADELFELAKEEGDDETLESIETDVKGFEEIVAGMEFRRMFAGEMDQANAFIDIQAGAGG 130

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DWA+MLLR Y ++ E++ FK E LE  +G+ AGIKSAT+ I+G  A+G+L+ E GV
Sbjct: 131 TEACDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSATIKIEGEYAFGYLRTETGV 190

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS+  RHTSFSS++VYP VDDS E+E++ +D R+DTYRASGAGGQH+N TD
Sbjct: 191 HRLVRKSPFDSSGGRHTSFSSVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTD 250

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG+VVQCQ +RSQH+N+A+A +ML+++LYE E++KR+  A+  E+ KT++G
Sbjct: 251 SAVRITHIPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYEHEMRKRQAEADKLEAGKTDVG 310

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 311 WGHQIRSYVLD-QSRIKDLRTNVEMSNTQKVLDGDLDPFIEASLKQ 355


>gi|78223569|ref|YP_385316.1| peptide chain release factor 2 [Geobacter metallireducens GS-15]
 gi|78194824|gb|ABB32591.1| bacterial peptide chain release factor 2 (bRF-2) [Geobacter
           metallireducens GS-15]
          Length = 364

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 180/342 (52%), Positives = 235/342 (68%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GGLFD D+  + +  +      P  W +  +A+ L+RER  ++  +     +  +  D  
Sbjct: 12  GGLFDIDSKREDIQEMEAHIAAPGFWDDNEKAQQLLRERTRIEKILELWDRLTRQADDIR 71

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           +L+EL  E  D   L E      +++ +VE  +F+ +LSG  D N  Y  ++AGAGGTE+
Sbjct: 72  VLIELGEEAGDEGTLDEVRALNDQLEKDVEGAEFQRMLSGTHDKNACYFSINAGAGGTEA 131

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMY R+ E++ +KTE  +   G+EAG+KSAT  + G  AYG+LK E G+HRL
Sbjct: 132 QDWAEMLLRMYLRYCERKGWKTEITDYQGGDEAGVKSATFTVDGEYAYGYLKAEAGIHRL 191

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+DSN+RRHTSF+S++ +P ++D IE+ I+E+D RIDTYR+SGAGGQHVNTTDSAV
Sbjct: 192 VRISPFDSNARRHTSFASVFAFPEIEDDIEVTINEADLRIDTYRSSGAGGQHVNTTDSAV 251

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIPTG+V   Q ERSQH NKA A  MLRAKLYE ELQ+RE  A      K EIGWG 
Sbjct: 252 RITHIPTGLVAASQCERSQHMNKATAMKMLRAKLYEKELQEREAKAAEIGGEKKEIGWGS 311

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYVL PY+MVKDLRT +E  +P  VLDGDL++F+ A L 
Sbjct: 312 QIRSYVLHPYKMVKDLRTGVETGNPDAVLDGDLEEFIVAFLM 353


>gi|51597475|ref|YP_071666.1| peptide chain release factor 2 [Yersinia pseudotuberculosis IP
           32953]
 gi|81638630|sp|Q666T2|RF2_YERPS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|51590757|emb|CAH22402.1| Peptide chain release factor 2 [Yersinia pseudotuberculosis IP
           32953]
          Length = 366

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 187/352 (53%), Positives = 241/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGL-FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           LS +   L G  FD+D   +RL  +N + E P +W     A+ L +ER  L+  ++ I +
Sbjct: 14  LSDRTAVLRGYLFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSTLEEIVTTIDQ 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D   LLELA+E DD     ET   L+ +  ++   +F  + SGE D  + YL++
Sbjct: 74  LEQGLEDVSGLLELAVEADDEETFNETIAELEVLDGKLGQLEFRRMFSGEYDRANCYLDL 133

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  DG+ AG+KSAT+ I G  A+GWL
Sbjct: 134 QAGSGGTEAQDWASMLLRMYLRWAESRGFKTEIIEESDGDVAGLKSATVKIIGEYAFGWL 193

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQ
Sbjct: 194 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQ 253

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E 
Sbjct: 254 HVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLED 313

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 314 NKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 364


>gi|28373662|pdb|1MI6|A Chain A, Docking Of The Modified Rf2 X-Ray Structure Into The Low
           Resolution Cryo-Em Map Of Rf2 E.Coli 70s Ribosome
          Length = 365

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 184/351 (52%), Positives = 238/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYE+E+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYEVEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|15803427|ref|NP_289460.1| peptide chain release factor 2 [Escherichia coli O157:H7 EDL933]
 gi|12517417|gb|AAG58019.1|AE005519_5 peptide chain release factor RF-2 [Escherichia coli O157:H7 str.
           EDL933]
          Length = 365

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 184/351 (52%), Positives = 237/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTS SS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSXSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|292900474|ref|YP_003539843.1| peptide chain release factor 2 [Erwinia amylovora ATCC 49946]
 gi|291200322|emb|CBJ47450.1| peptide chain release factor 2 [Erwinia amylovora ATCC 49946]
          Length = 365

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 183/351 (52%), Positives = 240/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +   L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSTVLRGYLDYDAKKERLQEVNAELEQPDVWNEPDRAQALGKERSALEAVVETLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+E +D     E    L  +  ++   +F  + SGE DS D Y+++ 
Sbjct: 74  TQGLEDVSGLLELAVEAEDEDTFNEAVAELDGLDKKLGELEFRRMFSGEYDSADCYMDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  DGE AG KSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGEVAGTKSATIKIIGDYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS+++YP VDD+I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+  LRAKLYE E+QK+       E +
Sbjct: 254 VNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQTAEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT++E  +   VLDGDLD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 363


>gi|93005664|ref|YP_580101.1| peptide chain release factor 2 [Psychrobacter cryohalolentis K5]
 gi|92393342|gb|ABE74617.1| bacterial peptide chain release factor 2 (bRF-2) [Psychrobacter
           cryohalolentis K5]
          Length = 349

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 186/343 (54%), Positives = 241/343 (70%), Gaps = 1/343 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RL  +N + E+P LW +   A  + +E+  LD  I  +  ++  L D  
Sbjct: 6   GGIFDFDGKQERLEEVNLELENPELWNDPERATKINKEKSQLDGVIDVVVSLETTLEDAS 65

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            +LELA+E +D S+L +    L   +  V   +F  + SGE D N+ YL++ +G+GGTE+
Sbjct: 66  AMLELAVEAEDESLLADVQAELDNAEKRVADLEFRRMFSGEMDPNNCYLDIQSGSGGTEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRWAE   FK E +E+  G  AGIKSAT+ IKG  A+GWL+ E GVHRL
Sbjct: 126 QDWAEMLLRMYTRWAEAHGFKVEVIEVSSGSVAGIKSATIEIKGNYAFGWLRTEIGVHRL 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DSN+ RHTSF++++V P +DD+IEI+I+ +D RIDTYR+SGAGGQHVNTTDSAV
Sbjct: 186 VRKSPFDSNNGRHTSFAAVFVSPEIDDNIEIDINPADLRIDTYRSSGAGGQHVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH P+GVVV CQ ERSQH NKA A  MLRAKLYELE+QKR E     E  K+++GWG 
Sbjct: 246 RITHEPSGVVVTCQNERSQHGNKATAMKMLRAKLYELEMQKRMESQQAVEDGKSDVGWGS 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 306 QIRSYVLDD-SRIKDLRTGVETFNTGAVLDGDLDQFIEASLKA 347


>gi|317405230|gb|EFV85568.1| peptide chain release factor 2 [Achromobacter xylosoxidans C54]
          Length = 386

 Score =  287 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 173/345 (50%), Positives = 246/345 (71%), Gaps = 1/345 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
             GG+FD+D   +RL  +N + EDP +W +   A+ L RE++ L++ +  +  +   L D
Sbjct: 41  LYGGIFDYDAKAERLQVVNAELEDPAVWNDPKHAQDLGREKKALEDVVETLTGLGTGLAD 100

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           +  L ELA  ++D + L+    +    + ++E  +F  + S  AD  + +L++ AGAGGT
Sbjct: 101 SNELFELAAADNDDATLESIELDANGFQEKLESLEFRRMFSNPADPLNCFLDIQAGAGGT 160

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDWA+MLLR Y ++AE++ FK E LE  +GE AGIKSAT+ ++G  A+G+L+ E GVH
Sbjct: 161 EAQDWASMLLRQYLKYAERKGFKAEVLEESEGEVAGIKSATIKLEGEYAFGYLRTETGVH 220

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DS+  RHTSF+S++VYP VDDS E+E++ +D R+DTYRASGAGGQH+N TDS
Sbjct: 221 RLVRKSPFDSSGGRHTSFASVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTDS 280

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+THIPTG+VVQCQ +RSQH+N+A+A  ML++KLYELE++ R       E SKT++GW
Sbjct: 281 AVRLTHIPTGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMAEQQKLEDSKTDVGW 340

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           G QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 341 GHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQ 384


>gi|90962160|ref|YP_536076.1| peptide chain release factor 2 [Lactobacillus salivarius UCC118]
 gi|301301257|ref|ZP_07207412.1| peptide chain release factor 2 [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|90821354|gb|ABD99993.1| Bacterial Peptide Chain Release Factor 2 [Lactobacillus salivarius
           UCC118]
 gi|300851133|gb|EFK78862.1| peptide chain release factor 2 [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 355

 Score =  287 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 165/347 (47%), Positives = 230/347 (66%), Gaps = 1/347 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGGLFD D   ++++    +  +P  W +  +A+ ++ E   L        E+ + + D
Sbjct: 2   NLGGLFDLDALEEKIAENEARMAEPGFWDDQEKAQEVIAENNDLKAKFETFHELAESISD 61

Query: 69  N-LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             + L  L    DD  +  +  +N Q  +  ++  Q   LLS + D N+A LE+H GAGG
Sbjct: 62  LGVSLELLQEIPDDEELQADLEENYQHAEKLLQSYQLNMLLSEKYDKNNAILEIHPGAGG 121

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TESQDW +MLLRMYTRWA +  FK E ++   G++AGIKS TL+I+G NAYG+L+ E+GV
Sbjct: 122 TESQDWGSMLLRMYTRWASQHDFKVETVDYQPGDDAGIKSVTLMIEGKNAYGYLRSERGV 181

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVRISP+DS  RRHTSF+S+ V P +DDS+E+E+   D +++ +RASGAGGQH+N T 
Sbjct: 182 HRLVRISPFDSAGRRHTSFASVNVMPELDDSVEVELRPEDIKMEVFRASGAGGQHINKTS 241

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+ HIPTG+VV  Q +RSQ +N+A A NMLRAKLY+LE++++E+     +  + +IG
Sbjct: 242 SAVRLIHIPTGIVVSSQAQRSQFQNRATAENMLRAKLYQLEMEEKEKQRAAIQGEQLDIG 301

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYV  PY MVKD RT+ E  +   V+DGDLD F+ A L  K
Sbjct: 302 WGSQIRSYVFHPYSMVKDHRTDYETGNIQAVMDGDLDPFINAYLQWK 348


>gi|261855042|ref|YP_003262325.1| hypothetical protein Hneap_0421 [Halothiobacillus neapolitanus c2]
 gi|261835511|gb|ACX95278.1| hypothetical protein Hneap_0421 [Halothiobacillus neapolitanus c2]
          Length = 365

 Score =  287 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 175/350 (50%), Positives = 245/350 (70%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  ++ + E P +W +   A+ L +ER  L+  +  +  +
Sbjct: 14  LSARAAALRGYLDFDVKKERLEEVDRELEVPDVWNDPARAQALGKERASLERVVHTLANM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN  LLE+A EEDD + +     ++   + ++   +F  + SGE D ++AYL++ 
Sbjct: 74  AQGLNDNADLLEMAAEEDDEATVASIEKDVVEFEKQIADLEFRRMFSGEMDESNAYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA++L+RMY RW ++R FKTE +E+ DGE AGIKSAT+  +G  A+GWL+
Sbjct: 134 SGAGGTESQDWASILMRMYLRWGDRRGFKTEVMEMSDGEVAGIKSATIRFEGEYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS++RRHTSF+S++V P VDD+IEIE++ +D R+D +RASGAGGQH
Sbjct: 194 TEIGVHRLVRKSPFDSDNRRHTSFASVFVSPEVDDNIEIEVNPADLRVDVFRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVR TH+PTGVVV CQ ERSQ +N+ +A  ML+AKLYELE+QKR  ++   E +
Sbjct: 254 VNRTESAVRFTHLPTGVVVACQAERSQIQNRERAMKMLKAKLYELEVQKRNAVSQALEDT 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K+++ WG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L 
Sbjct: 314 KSDVSWGNQIRSYVLD-QSRIKDLRTGHETGNTQAVLDGDLDPFIEASLK 362


>gi|225867150|ref|YP_002752528.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus 03BB102]
 gi|225787101|gb|ACO27318.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus 03BB102]
          Length = 380

 Score =  287 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 170/353 (48%), Positives = 228/353 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L    G        ++++ L  K      W +   A+ ++ E   L + +   ++
Sbjct: 27  KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 86

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   +  I  EL  EE D  + +E    ++ +  E+   + + LLS   D N+A LE+
Sbjct: 87  LDETFENLEITHELLKEEYDEELHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAEKR FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P  +D +EIE+   D +IDTYRASGAGGQ
Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 266

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PT  VV CQ ERSQ KN+  A  ML+AKLY+ +L++++   +    
Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EIGWG QIRSYV  PY +VKD RTN E  +   V+DG++D F+ A L  +
Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379


>gi|218900306|ref|YP_002448717.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus G9842]
 gi|218544557|gb|ACK96951.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus G9842]
          Length = 380

 Score =  287 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 169/353 (47%), Positives = 228/353 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L    G        ++++ L  K      W +   A+ ++ E   L + +   ++
Sbjct: 27  KMAKRLAAFRGSLCLPTKEKQIAELEEKMMSAGFWDDQQGAQAVINEANALKDMVGSFRQ 86

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   +  +  EL  EE D  + +E    ++ +  E+   + + LLS   D N+A LE+
Sbjct: 87  LDETFENLEVTHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAEKR FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P  +D +EIE+   D +IDTYRASGAGGQ
Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 266

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PT  VV CQ ERSQ KN+  A  ML+AKLY+ +L++++   +    
Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAQLDEIRG 326

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EIGWG QIRSYV  PY +VKD RTN E  +   V+DG++D F+ A L  +
Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379


>gi|172058432|ref|YP_001814892.1| peptide chain release factor 2 [Exiguobacterium sibiricum 255-15]
 gi|229576666|sp|B1YLH0|RF2_EXIS2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|171990953|gb|ACB61875.1| peptide chain release factor 2 [Exiguobacterium sibiricum 255-15]
          Length = 366

 Score =  287 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 167/351 (47%), Positives = 231/351 (65%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + ++L+      D +  + R+  L  +   P  W N   A+ ++ E   L   +   + +
Sbjct: 13  MEKKLDEYKASLDLETKISRIEELENEMTYPDFWNNQESAQKVIDESNGLKAMVDKYQHL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            D   + ++  EL  EE D  + +E    L  IK + +  + + LL+GE D+N+A LE+H
Sbjct: 73  ADGHENIVLTYELIKEEPDVELQEELESELGDIKKKFDEFELQILLNGEYDANNAILELH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+MLLRMY R+ +K+ +K E ++   G+EAG+KS TL I+G NAYG+LK
Sbjct: 133 PGAGGTESQDWASMLLRMYQRFCDKQGWKVETMDYQPGDEAGVKSVTLRIQGHNAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+G+HRLVRISP+DS+ RRHTSF S  V P  +D I+IEI   D R+DTYRASGAGGQH
Sbjct: 193 AEKGIHRLVRISPFDSSGRRHTSFVSCDVMPEFNDDIDIEIRTEDLRVDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +NTTDSAVRITH+PTGVVV CQQERSQ KN+  A  ML+AKLY+ E++++++  +     
Sbjct: 253 INTTDSAVRITHVPTGVVVSCQQERSQIKNREAAMKMLKAKLYQREIEEKQKKLDEIRGE 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++I WG QIRSYV  PY MVKD RTN E  +    +DGD+  F+ A L +
Sbjct: 313 KSDIAWGSQIRSYVFHPYSMVKDHRTNYEVGNTQGAMDGDIMGFIDAYLRL 363


>gi|298291326|ref|YP_003693265.1| peptide chain release factor 2 [Starkeya novella DSM 506]
 gi|296927837|gb|ADH88646.1| peptide chain release factor 2 [Starkeya novella DSM 506]
          Length = 376

 Score =  287 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 213/353 (60%), Positives = 267/353 (75%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++      L    D+D +  RL+ LN   EDP+LW +   A+ LM+ER  L++ +  I+ 
Sbjct: 11  EIREAAGLLRQHIDFDRSKARLAELNALAEDPNLWNDPERAQKLMQERGTLEDGLGAIER 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I   L DN+ L+EL   E D SI+ E +  L R+K EV  +Q E+LLSGEADSND+YLEV
Sbjct: 71  INRELADNVELIELGEAEGDDSIVDEAAAALDRLKAEVARRQLEALLSGEADSNDSYLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGT+SQDWA MLLRMYTRWAE+R FK E +E   GE AG+KSAT+L+KG NAYGWL
Sbjct: 131 HAGAGGTDSQDWALMLLRMYTRWAERRGFKVELIEEQAGETAGLKSATMLVKGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DSN+RR TSF+SI VYPV+DD I ++I E+D R+DT R+ GAGGQ
Sbjct: 191 KTEGGVHRLVRISPFDSNARRQTSFASIDVYPVIDDRIVVDIKEADVRVDTMRSGGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVR+THIPTG+ V  Q +RSQHKN+A AW+MLRAKLYE+EL+KRE  A   ++
Sbjct: 251 HVNKTESAVRLTHIPTGIAVVSQGDRSQHKNRATAWDMLRAKLYEMELKKREAQAAADQA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +KT+IGWG QIRSYVLQPYQ+VKDLRT +   +P +VLDGDLD FM+A LA +
Sbjct: 311 AKTDIGWGHQIRSYVLQPYQLVKDLRTGVTSGTPQEVLDGDLDPFMEAALAQR 363


>gi|887841|gb|AAA83072.1| peptide chain release factor 2 (RF-2) [Escherichia coli]
          Length = 365

 Score =  287 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 182/351 (51%), Positives = 235/351 (66%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHR VR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YR SGAGGQH
Sbjct: 194 TETGVHRXVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRTSGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK Q    ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQXMKQMKAKLYELEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|283788451|ref|YP_003368316.1| peptide chain release factor 2 (RF-2) [Citrobacter rodentium
           ICC168]
 gi|282951905|emb|CBG91623.1| peptide chain release factor 2 (RF-2) [Citrobacter rodentium
           ICC168]
          Length = 365

 Score =  287 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 185/351 (52%), Positives = 237/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  AQGLEDVSGLLELAVEADDEETFNEAVAELDMLEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKISGEYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|254491393|ref|ZP_05104572.1| peptide chain release factor 2 [Methylophaga thiooxidans DMS010]
 gi|224462871|gb|EEF79141.1| peptide chain release factor 2 [Methylophaga thiooxydans DMS010]
          Length = 348

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 184/346 (53%), Positives = 249/346 (71%), Gaps = 1/346 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GG+FD+D+  ++L  +  + E P +W +   A+ L +ER  L+  ++ +   +D L
Sbjct: 1   MTISGGIFDYDDKAEQLVEVTRELESPSVWDDPDRAQKLGQERASLEKIVTTLSSHRDTL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LLELA+EE+D       + +L  ++  +E  +F+ + SG+ D N AY+++ +G+G
Sbjct: 61  EDAKDLLELAVEENDQETFDAITADLDELEKGLEKLEFQRMFSGKLDKNSAYIDIQSGSG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWAN+LLRMY RW E + +K E +E+  GE AGIKSAT+ ++G  A+G L+ E G
Sbjct: 121 GTEAQDWANILLRMYLRWGESQDYKVELMEVSAGEVAGIKSATIRMEGEYAFGMLRTETG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR SP+DS +RRHTSF+SI+VYP VDD+IEI+I+ +D R+DTYRASGAGGQHVNTT
Sbjct: 181 VHRLVRKSPFDSGARRHTSFASIFVYPEVDDTIEIDINPADLRVDTYRASGAGGQHVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSA+RITH PT +VVQCQ ERSQHKNK QA N LRAKLYELELQK+ E+    E SK++I
Sbjct: 241 DSAIRITHEPTNIVVQCQNERSQHKNKDQAMNQLRAKLYELELQKQNEVKQAAEESKSDI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           GWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 301 GWGSQIRSYVLD-QSRIKDLRTGVETGNTQAVLDGDLDQFIEASLK 345


>gi|157373979|ref|YP_001472579.1| peptide chain release factor 2 [Shewanella sediminis HAW-EB3]
 gi|157316353|gb|ABV35451.1| peptide chain release factor 2 [Shewanella sediminis HAW-EB3]
          Length = 352

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 173/342 (50%), Positives = 232/342 (67%), Gaps = 1/342 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RL  +  + E   +W N   A+ L +ER  L+  +  I ++   L D  
Sbjct: 9   GGIFDYDAKKERLEEVCAELESAEVWSNPENAQALGKERSSLEVIVKTIDDMDSGLEDVQ 68

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L+ELA+EEDD     + S  L  ++  +E  +F  + SG  D  D YL++ +G+GGTE+
Sbjct: 69  DLVELAVEEDDEETFDDASTELDGLEKRLEELEFRRMFSGPHDVADCYLDIQSGSGGTEA 128

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWANM+LRM+ RW +   +K E +E+ DG+ AGIK AT+   G  A+G L+ E GVHRL
Sbjct: 129 QDWANMVLRMFLRWGDAHDYKPELIEVTDGDVAGIKGATIKFTGEYAFGSLRTETGVHRL 188

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQHVN T+SA+
Sbjct: 189 VRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQHVNKTESAI 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH+PT  VVQCQ +RSQHKN+  A   L+AKLYELE+ K+       E SK++IGWG 
Sbjct: 249 RITHVPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNADKQAAEDSKSDIGWGS 308

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 309 QIRSYVLDD-ARIKDLRTGVESRNTQSVLDGDLDKFIEASLK 349


>gi|315499977|ref|YP_004088780.1| peptide chain release factor 2 [Asticcacaulis excentricus CB 48]
 gi|315417989|gb|ADU14629.1| peptide chain release factor 2 [Asticcacaulis excentricus CB 48]
          Length = 373

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 207/352 (58%), Positives = 253/352 (71%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + +  L    DWD A++RL  LN + EDP LW    EA+ +MRER  L   +  +  +
Sbjct: 12  IEQSIGLLRRRLDWDVALRRLDELNARVEDPTLWDKPEEAQSVMRERTKLSGGVDAVNSL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D L   ELA  E D  +L+E    L+ IK +    + E+LLSGEAD NDAY+E++
Sbjct: 72  TKELQDALDYAELADMEGDEELLEEARAMLKAIKEKAARAELEALLSGEADGNDAYVEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTES DWA +LLRMYTRWA +        E   GE+AGIKSAT+++KG NAYGWLK
Sbjct: 132 SGAGGTESCDWAGILLRMYTRWATQHGMTVSIEEETPGEQAGIKSATIMVKGTNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DSN+RRHTSF+S+WVYPVVDD+I I+I+ +D R DTYRASGAGGQH
Sbjct: 192 TEAGVHRLVRISPFDSNARRHTSFASVWVYPVVDDTIVIDINPADVRTDTYRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVR+THIPTG+ V CQ  RSQH N+ +AW MLRA+LYELELQKRE      E  
Sbjct: 252 VNKTDSAVRLTHIPTGIAVACQAGRSQHANRDEAWKMLRARLYELELQKREAAQAALEDQ 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KT+IGWG QIRSYVLQPYQMVKDLRT++E +    VLDGDLD FM A+LA +
Sbjct: 312 KTDIGWGHQIRSYVLQPYQMVKDLRTDVETSDSQGVLDGDLDAFMGASLAQR 363


>gi|56459931|ref|YP_155212.1| protein chain release factor B, RF-2 [Idiomarina loihiensis L2TR]
 gi|56178941|gb|AAV81663.1| Protein chain release factor B, RF-2 [Idiomarina loihiensis L2TR]
          Length = 351

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 182/343 (53%), Positives = 240/343 (69%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+D  ++RL  +  + E P++W +  +A+ L +ER  L+  +  + ++Q  L D 
Sbjct: 7   LGGIFDYDAKLERLEEVTREMEQPNVWDDPPKAQALGKERAALEQVVQTLDKLQQGLDDV 66

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L++LA+E +D     E  + L  +  ++E  +F  + S + DS D YL++ +G+GGTE
Sbjct: 67  EGLVDLAVEAEDEDTFNEAHEELSGLVKQLEALEFRRMFSKDNDSADCYLDIQSGSGGTE 126

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANMLLRMY RWAE   FK E  E+ +G+ AGIKSAT+ + G  AYGWL+ E GVHR
Sbjct: 127 AQDWANMLLRMYLRWAEAHDFKAEITELSEGDVAGIKSATVRVVGEYAYGWLRTETGVHR 186

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS +RRHTSF+S++VYP VDD I+IEI  SD R+DTYRASGAGGQHVN TDSA
Sbjct: 187 LVRKSPFDSGNRRHTSFASVFVYPEVDDDIDIEIDPSDLRVDTYRASGAGGQHVNRTDSA 246

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+TH PTG+VVQCQ +RSQHKN+  A   L+AKLYE ELQK+ E     E SK +IGWG
Sbjct: 247 VRLTHEPTGIVVQCQSDRSQHKNRDSAMKQLKAKLYEFELQKQNEEKQALEDSKADIGWG 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL     +KDLRT IE  +   VLDG LD F++A+L 
Sbjct: 307 SQIRSYVLDD-ARIKDLRTGIENRNTQAVLDGALDPFIEASLK 348


>gi|242372989|ref|ZP_04818563.1| peptide chain release factor 2 [Staphylococcus epidermidis
           M23864:W1]
 gi|242349315|gb|EES40916.1| peptide chain release factor 2 [Staphylococcus epidermidis
           M23864:W1]
          Length = 386

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 167/355 (47%), Positives = 232/355 (65%), Gaps = 1/355 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           M +   L  LGGLFD +N    +        DP  W +  +A+ ++ +   L + ++   
Sbjct: 26  MNIRITLTKLGGLFDLENKETNIQEYEEMMADPGFWDDQNKAQDIIDKNNALKSIVNGYH 85

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           ++ + + D     EL  EE D  +  E  + + + K +++  + + LL G  D+N+A LE
Sbjct: 86  DLANEVEDMSATRELLQEEYDEDMKAELEEEVIQFKEKMDQYELQLLLDGPHDANNAILE 145

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +H GAGGTESQDWA+MLLRMY R+ E++ FK E ++   G+EAG+KS TLLIKG NAYG+
Sbjct: 146 LHPGAGGTESQDWASMLLRMYQRYGEQKGFKVETVDYLPGDEAGVKSVTLLIKGHNAYGY 205

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAG 239
           LK E+GVHRLVRISP+DS+ RRHTSF+S  V P   +D IEIEI+  D  +DT+RASGAG
Sbjct: 206 LKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFDNDEIEIEINPDDITVDTFRASGAG 265

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQH+N T+SA+RITH PTG+VV  Q ERSQ KN+  A  ML++KLY+L+L+++E      
Sbjct: 266 GQHINKTESAIRITHHPTGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQEREMAEI 325

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              + EIGWG QIRSYV  PY MVKD RTN E      V+DG+++ F++A L  +
Sbjct: 326 RGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGEIEPFIEAYLRKE 380


>gi|260599230|ref|YP_003211801.1| peptide chain release factor 2 [Cronobacter turicensis z3032]
 gi|260218407|emb|CBA33491.1| Peptide chain release factor 2 [Cronobacter turicensis z3032]
          Length = 342

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 183/341 (53%), Positives = 236/341 (69%), Gaps = 1/341 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++   L D   L
Sbjct: 1   MFDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVETLDQMSQGLDDVAGL 60

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           LELA+E DD     E    L +++ ++   +F  + SGE DS D YL++ AG+GGTE+QD
Sbjct: 61  LELAVEADDEETFNEAVVELDQLEAKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQD 120

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA+MLLRMY RWAE R FKTE +E  +GE AG+KSAT+ I G  A+GWL+ E GVHRLVR
Sbjct: 121 WASMLLRMYLRWAEARGFKTEIIEESEGEVAGLKSATIKISGDYAFGWLRTETGVHRLVR 180

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
            SP+DS  RRHTSFSS +VYP V+D I+IEI+ +D RID YRASGAGGQHVN T+SAVRI
Sbjct: 181 KSPFDSGGRRHTSFSSAFVYPEVEDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRI 240

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           THIPTG V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG QI
Sbjct: 241 THIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQALEDNKSDIGWGSQI 300

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           RSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 301 RSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 340


>gi|126173117|ref|YP_001049266.1| peptide chain release factor 2 [Shewanella baltica OS155]
 gi|153002001|ref|YP_001367682.1| peptide chain release factor 2 [Shewanella baltica OS185]
 gi|304410531|ref|ZP_07392149.1| peptide chain release factor 2 [Shewanella baltica OS183]
 gi|307304624|ref|ZP_07584374.1| peptide chain release factor 2 [Shewanella baltica BA175]
 gi|125996322|gb|ABN60397.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella
           baltica OS155]
 gi|151366619|gb|ABS09619.1| peptide chain release factor 2 [Shewanella baltica OS185]
 gi|304351015|gb|EFM15415.1| peptide chain release factor 2 [Shewanella baltica OS183]
 gi|306912026|gb|EFN42450.1| peptide chain release factor 2 [Shewanella baltica BA175]
          Length = 352

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 175/343 (51%), Positives = 233/343 (67%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+D   +RL  +  + E   +W +   A+ L +ER  L+  +  I ++   L D 
Sbjct: 8   LGGIFDYDAKNERLEEVTRELESSEVWNDPERAQALGKERASLEAVVKTIDDMDSGLEDV 67

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+EE+D     ETS  L  ++  +   +F  + SG  D+++ YL++ +G+GGTE
Sbjct: 68  EGLLELAIEEEDEDTFNETSKELDYLESRLADLEFRRMFSGPQDASNCYLDIQSGSGGTE 127

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANM+LRMY RW E   F  E +E+ DG+ AGIK AT+   G  A+GWL+ E GVHR
Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS+ RRHTSF S++VYP +DD I I+I+ SD RIDTYRASGAGGQHVN T+SA
Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPSDLRIDTYRASGAGGQHVNKTESA 247

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +RITH+PT  VVQCQ +RSQHKNK  A   L+AKL+ELE+ K+       E +K++IGWG
Sbjct: 248 IRITHLPTNTVVQCQNDRSQHKNKDAAMKQLKAKLFELEMLKQNADKQAAEDAKSDIGWG 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL     +KDLRT +E  S   VLDGDLD F++A+L 
Sbjct: 308 SQIRSYVLDD-ARIKDLRTGVENRSTQAVLDGDLDKFIEASLK 349


>gi|302037377|ref|YP_003797699.1| peptide chain release factor 2 [Candidatus Nitrospira defluvii]
 gi|300605441|emb|CBK41774.1| Peptide chain release factor 2 (RF-2) [Candidatus Nitrospira
           defluvii]
          Length = 377

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 176/343 (51%), Positives = 233/343 (67%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
             GG+FD       L+ +  KT  P  W++   A  + R +  LD  +S  ++ + R  D
Sbjct: 15  NYGGIFDLARMTAELNDIEVKTSQPDFWKDTQAAAKVNRRKAALDRELSRWRDTERRQND 74

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              LLELALE  D  + QE    L+  +  V   + E LLSGE DS++A   +H GAGGT
Sbjct: 75  IEALLELALESGDAGLEQELLAELEPFEKAVAQFRIELLLSGELDSSNAIFAIHPGAGGT 134

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ESQDWA MLLRMY RWAE++ FK E L++  G+EAGIKSATL + GP AYG+LK E GVH
Sbjct: 135 ESQDWAQMLLRMYVRWAEQKGFKVETLDLLAGDEAGIKSATLSVSGPYAYGYLKAEAGVH 194

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVRISP+D+N RRHTSF+S++VYP ++D +++ I + D R+DT+RA GAGGQ+VN  ++
Sbjct: 195 RLVRISPFDANKRRHTSFASVFVYPELEDDVQVVIDDKDLRVDTFRAGGAGGQNVNKVET 254

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           A+RITHIPTG+VVQCQ ERSQ +N+  A  +L+A+L+E+E +K+E   N     K +I W
Sbjct: 255 AIRITHIPTGIVVQCQNERSQLQNRNGAMKILKARLFEVEQRKKEAEFNAIVGEKKDIAW 314

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G QIRSYV QPYQMVKD RT  E    S V+DG+LD F++A L
Sbjct: 315 GSQIRSYVFQPYQMVKDHRTGYEVGQVSAVMDGELDGFIEAYL 357


>gi|227891182|ref|ZP_04008987.1| peptide chain release factor 2 [Lactobacillus salivarius ATCC
           11741]
 gi|227867056|gb|EEJ74477.1| peptide chain release factor 2 [Lactobacillus salivarius ATCC
           11741]
          Length = 355

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 165/347 (47%), Positives = 230/347 (66%), Gaps = 1/347 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGGLFD D   ++++    +  +P  W +  +A+ ++ E   L        E+ + + D
Sbjct: 2   NLGGLFDLDALEEKIAENEARMAEPGFWDDQEKAQEVIAENNDLKAKFETFHELAESISD 61

Query: 69  N-LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             + L  L    DD  +  +  +N Q  +  ++  Q   LLS + D N+A LE+H GAGG
Sbjct: 62  LGVSLELLQEIPDDEELQADLEENYQHAEKLLQSYQLNMLLSEKYDKNNAILEIHPGAGG 121

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TESQDW +MLLRMYTRWA +  FK E ++   G++AGIKS TL+I+G NAYG+L+ E+GV
Sbjct: 122 TESQDWGSMLLRMYTRWASQHDFKVETVDYQPGDDAGIKSVTLMIEGKNAYGYLRSERGV 181

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVRISP+DS  RRHTSF+S+ V P +DDS+E+E+   D +++ +RASGAGGQH+N T 
Sbjct: 182 HRLVRISPFDSAGRRHTSFASVNVMPELDDSVEVELRPEDIKMEVFRASGAGGQHINKTS 241

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+ HIPTG+VV  Q +RSQ +N+A A NMLRAKLY+LE++++E+     +  + +IG
Sbjct: 242 SAVRLIHIPTGIVVSSQAQRSQFQNRATAENMLRAKLYQLEVEEKEKQRAAIQGEQLDIG 301

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYV  PY MVKD RT+ E  +   V+DGDLD F+ A L  K
Sbjct: 302 WGSQIRSYVFHPYSMVKDHRTDYETGNIQAVMDGDLDPFINAYLQWK 348


>gi|194289273|ref|YP_002005180.1| peptide chain release factor rf-2 [Cupriavidus taiwanensis LMG
           19424]
 gi|193223108|emb|CAQ69113.1| peptide chain release factor RF-2 [Cupriavidus taiwanensis LMG
           19424]
          Length = 357

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 177/346 (51%), Positives = 247/346 (71%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD+D  V RL  +N   EDP +W N   A+ L +E++ L+  +  + ++ D L 
Sbjct: 11  KIYGGIFDYDVKVGRLDEVNGLLEDPDVWNNPKRAQDLGKEKKMLEGVVGVLGKLTDDLV 70

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
               L ELA EE D   L+    +++  +  V   +F  + SGE D  +A++++ AGAGG
Sbjct: 71  GAEELFELAKEEGDDDTLESIEADVKGFEAVVADMEFRRMFSGEMDQANAFIDIQAGAGG 130

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DWA+MLLR Y ++ E++ FK E LE  +G+ AGIKSAT+ I+G  A+G+L+ E GV
Sbjct: 131 TEACDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSATIKIEGEYAFGYLRTETGV 190

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS+  RHTSFSS++VYP VDDS E+EI+ +D R+DTYRASGAGGQH+N TD
Sbjct: 191 HRLVRKSPFDSSGGRHTSFSSVFVYPEVDDSFEVEINPADLRVDTYRASGAGGQHINKTD 250

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG+VVQCQ +RSQH+N+A+A +ML+++LYE E++KR+  A+  E+ KT++G
Sbjct: 251 SAVRITHIPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYEHEMRKRQAEADKLEAGKTDVG 310

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 311 WGHQIRSYVLD-QSRIKDLRTNVEMSNTQKVLDGDLDPFIEASLKQ 355


>gi|217420389|ref|ZP_03451894.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 576]
 gi|226195477|ref|ZP_03791065.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei Pakistan 9]
 gi|237813009|ref|YP_002897460.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei MSHR346]
 gi|238561621|ref|ZP_00441741.2| peptide chain release factor 2, programmed frameshift [Burkholderia
           mallei GB8 horse 4]
 gi|242317384|ref|ZP_04816400.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 1106b]
 gi|251767233|ref|ZP_04820018.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           mallei PRL-20]
 gi|284159918|ref|YP_001059616.2| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei 668]
 gi|217395801|gb|EEC35818.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 576]
 gi|225932437|gb|EEH28436.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei Pakistan 9]
 gi|237504244|gb|ACQ96562.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei MSHR346]
 gi|238524226|gb|EEP87660.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           mallei GB8 horse 4]
 gi|242140623|gb|EES27025.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 1106b]
 gi|243063468|gb|EES45654.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           mallei PRL-20]
 gi|261825971|gb|ABN00993.2| peptide chain release factor 2, programmed frameshift [Burkholderia
           mallei NCTC 10229]
 gi|261835054|gb|ABO05438.2| peptide chain release factor 2, programmed frameshift [Burkholderia
           mallei NCTC 10247]
 gi|283775112|gb|ABN84239.2| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 668]
          Length = 367

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 179/351 (50%), Positives = 250/351 (71%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L R+   L G   +D   +RL+ +N + EDP++W +   A+ L RE++ L++ ++ +  +
Sbjct: 16  LRRRAGELRGYLCYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLESVVTTLTAL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L ELA EE D   L  T  +  +++  V   +F  + S  AD N+ ++++ 
Sbjct: 76  DNDLRDAQDLFELAHEEGDEETLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++L+E EL+KR+   +  ESS
Sbjct: 256 INKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESS 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF+ A+L  
Sbjct: 316 KTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTKAVLDGDLDDFISASLKQ 365


>gi|90020863|ref|YP_526690.1| peptide chain release factor 2 [Saccharophagus degradans 2-40]
 gi|89950463|gb|ABD80478.1| bacterial peptide chain release factor 2 (bRF-2) [Saccharophagus
           degradans 2-40]
          Length = 347

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 178/345 (51%), Positives = 241/345 (69%), Gaps = 1/345 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           CLGG+F++    +RL+ +  +  +P +W +   A+ L  ER  L+  +  I+ +++ + D
Sbjct: 2   CLGGIFEYAEKKERLAEVELELAEPDVWDDPARAQALGSERSSLELVVETIETLENGVAD 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              LLE+A+EE D     E      R++  +   +F  + SGE D N+AYL++ AG+GGT
Sbjct: 62  CRELLEMAIEESDEDSFLEICSEADRLEAHLATLEFRRMFSGEMDPNNAYLDIQAGSGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDWA MLLRMY RW E + FKT   E   G+ AGIKSAT+  +G  A+GWL+ E GVH
Sbjct: 122 EAQDWAEMLLRMYLRWGEDKGFKTTLEEASAGDVAGIKSATIRFEGEYAFGWLRTETGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DS +RRHTSFSS++V P +DD+I+IEI+++D R DTYRASGAGGQHVN TDS
Sbjct: 182 RLVRKSPFDSGNRRHTSFSSVFVSPEIDDNIDIEINKADVREDTYRASGAGGQHVNKTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+TH PTG+VVQCQ ERSQH N+ +AW MLRA++YE E+QKR       E SK++IGW
Sbjct: 242 AVRLTHAPTGIVVQCQSERSQHSNRDKAWKMLRARVYEQEMQKRNAEKQALEDSKSDIGW 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           G QIRSYVL     +KDLRTN++ ++ + VLDG LDDF+ A+L  
Sbjct: 302 GSQIRSYVLDDQ-RIKDLRTNVQTSNCNAVLDGKLDDFIVASLKA 345


>gi|326794289|ref|YP_004312109.1| peptide chain release factor 2 [Marinomonas mediterranea MMB-1]
 gi|326545053|gb|ADZ90273.1| Peptide chain release factor 2 [Marinomonas mediterranea MMB-1]
          Length = 364

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 178/351 (50%), Positives = 244/351 (69%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L G  D+D   +RL  ++ + EDP +W +   A+ L +ER  L+  +  +  +
Sbjct: 13  LSERSQILRGYLDYDAKKERLEEVSRELEDPEIWNDPEYAQKLGKERSTLEAVVETLDNL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  + D+  LL++A+EEDD   ++     L  +  ++   +F  + SGE D+N A+L++ 
Sbjct: 73  ESGVEDSKDLLDMAVEEDDADSVEAVELELNDLDEQLAKLEFRRMFSGEMDANSAFLDIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +G+GGTE+QDWANMLLRMY RW E + FK E +E+ +GE AGIKSAT+  +G  A+GWL+
Sbjct: 133 SGSGGTEAQDWANMLLRMYLRWGEDKGFKVELMEVSEGEVAGIKSATVRFEGEYAFGWLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSF+S+++ P +DD++EI+I+ +D RIDTYR+SGAGGQH
Sbjct: 193 TETGVHRLVRKSPFDSGNRRHTSFASVFLSPEIDDNVEIDINPADLRIDTYRSSGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT  VVQCQ +RSQH NK  A   LRAKLYELE+ KR E A   E +
Sbjct: 253 VNTTDSAVRITHVPTNTVVQCQNQRSQHANKDFAMKQLRAKLYELEMLKRTEAAQALEDT 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E T+   VLDG LD F+ A+L  
Sbjct: 313 KSDIGWGSQIRSYVLD-SSRIKDLRTGVESTNTGSVLDGSLDQFIVASLKQ 362


>gi|316934390|ref|YP_004109372.1| peptide chain release factor 2 [Rhodopseudomonas palustris DX-1]
 gi|315602104|gb|ADU44639.1| peptide chain release factor 2 [Rhodopseudomonas palustris DX-1]
          Length = 376

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 217/353 (61%), Positives = 273/353 (77%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + +  L    D D +  RL+ LN   EDP+LW +  +A+ LM+ER  L++A++ I +
Sbjct: 11  EIKQSVGLLRRHLDVDQSTVRLAELNKLAEDPNLWNDPQKAQKLMQERTSLEDALTGIGK 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L DN+ ++EL   E D  I++E  + L+ +K EV  ++ E+LLSGEAD  D YLEV
Sbjct: 71  VERELTDNIDMIELGEAEGDEGIVKEAEEALKALKKEVARRELEALLSGEADRFDTYLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA+MLLRMY RWAEK  FK E LE  DGEEAGIKSAT+ I G NAYGWL
Sbjct: 131 HAGAGGTESQDWASMLLRMYVRWAEKHGFKIEYLEESDGEEAGIKSATIQISGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DSN+RRHTSFSS+ ++PV+DDSI+I+I ESD R DT R+ GAGGQ
Sbjct: 191 KTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDDSIKIDIKESDVRTDTMRSGGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVR+THIPTGV V CQ  RSQHKN+AQAW+MLRA+LYE+EL+KREE A   ++
Sbjct: 251 HVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLYEIELKKREEQAAADQA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +KTEIGWG QIRSYVLQPYQMVKDLRT ++ +  + VLDGDLD+FM ATLA +
Sbjct: 311 AKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDEFMAATLAQR 363


>gi|221198422|ref|ZP_03571468.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           multivorans CGD2M]
 gi|221208901|ref|ZP_03581898.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           multivorans CGD2]
 gi|221214768|ref|ZP_03587737.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           multivorans CGD1]
 gi|221165307|gb|EED97784.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           multivorans CGD1]
 gi|221171184|gb|EEE03634.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           multivorans CGD2]
 gi|221182354|gb|EEE14755.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           multivorans CGD2M]
          Length = 367

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 180/353 (50%), Positives = 251/353 (71%), Gaps = 1/353 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           + L  +   L G   +D    RL+ +N + EDP++W +   A+ L RE++ L+  ++ + 
Sbjct: 14  LDLRTRAGELRGYLCYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLT 73

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           E+ + L D L L ELA EE D   L  + ++  +++  V   +F  + S  AD N+ +++
Sbjct: 74  ELDNDLRDALDLFELAREEGDEDTLIASEEDAAKLEARVADIEFRRMFSNPADPNNCFID 133

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+
Sbjct: 134 IQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGY 193

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGG
Sbjct: 194 LRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGG 253

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE EL+KR+   +  E
Sbjct: 254 QHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAELRKRQAEQDKLE 313

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           SSKT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF+ A+L  
Sbjct: 314 SSKTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTKAVLDGDLDDFISASLKQ 365


>gi|94309981|ref|YP_583191.1| peptide chain release factor 2 [Cupriavidus metallidurans CH34]
 gi|93353833|gb|ABF07922.1| peptide chain release factor RF-2 [Cupriavidus metallidurans CH34]
          Length = 357

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 174/346 (50%), Positives = 246/346 (71%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD+D  V RL  +N   EDP +W N   A+ L +E++ L+  +  + ++ D L 
Sbjct: 11  KIYGGIFDYDVKVNRLDEVNGLLEDPDVWNNPKRAQDLGKEKKALEGVVQVLGKLTDDLN 70

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
               L ELA EE D   L+    ++   +  V   +F  + SGE D  +A++++ AGAGG
Sbjct: 71  GTDELFELAREEGDDETLESIEADVSGFEALVADMEFRRMFSGEMDQANAFIDIQAGAGG 130

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DWA+MLLR Y ++ E++ FK E LE  +G+ AGIKSAT+ ++G  A+G+L+ E GV
Sbjct: 131 TEACDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSATIKVEGEYAFGYLRTETGV 190

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS+  RHTSFSS++VYP VDDS E+E++ +D R+DTYRASGAGGQH+N TD
Sbjct: 191 HRLVRKSPFDSSGGRHTSFSSVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTD 250

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VVQCQ +RSQH+N+A+A +ML+++LYE E++KR+  A+  E+ KT++G
Sbjct: 251 SAVRITHMPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYEHEMRKRQAEADKLEAGKTDVG 310

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 311 WGHQIRSYVLD-QSRIKDLRTNVEMSNTQKVLDGDLDPFIEASLKQ 355


>gi|89094633|ref|ZP_01167570.1| peptide chain release factor 2, programmed frameshift
           [Oceanospirillum sp. MED92]
 gi|89081103|gb|EAR60338.1| peptide chain release factor 2, programmed frameshift
           [Oceanospirillum sp. MED92]
          Length = 364

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 172/351 (49%), Positives = 240/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L G  D++   +RL  ++ + EDP +W +   A+ L +ER  L+  +  I ++
Sbjct: 13  IKERTEALRGFLDYETKQERLEEVSRELEDPAVWDDPENAQKLGKERSTLEAVVGTIDDL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + D   LL++A+EEDD   + E   ++  +   ++  +F  + +GEAD N+A+L++ 
Sbjct: 73  TAGVADTRDLLDMAVEEDDEDTVAEVESDVTAMLDRLQQLEFRRMFAGEADPNNAFLDIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA M+LRMY RW E + FKTE LE   G+ AGIKSAT+  +G  A+GWL+
Sbjct: 133 AGSGGTEAQDWAEMMLRMYLRWGEDKGFKTELLECSAGDVAGIKSATISFQGEYAFGWLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS++V P +DD+I+IEI+ +D R+D YRASGAGGQH
Sbjct: 193 TETGVHRLVRKSPFDSGGRRHTSFSSVFVSPEIDDNIDIEINPADLRVDVYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH P+G+VVQ Q +RSQH+NK      LRAKLYE+E+ KR E A   E +
Sbjct: 253 VNRTESAVRITHEPSGIVVQSQAQRSQHQNKDTCMKQLRAKLYEVEMLKRTEAAQEQEDN 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K +IGWG QIRSYVL     +KDLRT ++ ++   VLDGDLD F++A+L  
Sbjct: 313 KADIGWGSQIRSYVLDDQ-RIKDLRTGVQSSNCDKVLDGDLDMFIEASLKA 362


>gi|120597725|ref|YP_962299.1| peptide chain release factor 2 [Shewanella sp. W3-18-1]
 gi|146294138|ref|YP_001184562.1| peptide chain release factor 2 [Shewanella putrefaciens CN-32]
 gi|120557818|gb|ABM23745.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella sp.
           W3-18-1]
 gi|145565828|gb|ABP76763.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella
           putrefaciens CN-32]
          Length = 352

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 172/343 (50%), Positives = 232/343 (67%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+D   +RL  +  + E   +W     A+ L +ER  L+  +  I ++   L D 
Sbjct: 8   LGGIFDYDAKHERLEEVTRELESSDVWNEPERAQALGKERASLEAVVKTIDDMDSGLEDV 67

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+EE+D     ET+  L  ++  +   +F  + SG  D+++ YL++ +G+GGTE
Sbjct: 68  EGLLELAVEEEDEDTFNETTKELDYLESRLADLEFRRMFSGPQDASNCYLDIQSGSGGTE 127

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANM+LRMY RW E   F  E +E+ DG+ AGIK AT+   G  A+GWL+ E GVHR
Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS+ RRHTSF S++VYP +DD I I+I+ +D RID YRASGAGGQHVN T+SA
Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPADLRIDVYRASGAGGQHVNRTESA 247

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT  VVQCQ +RSQHKNK  A   L+AKL+ELE+ K+       E +K++IGWG
Sbjct: 248 VRITHLPTNTVVQCQNDRSQHKNKDSAMKQLKAKLFELEMHKQNAEKQAAEDAKSDIGWG 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL     +KDLRT++E  +   VLDGDLD F++A+L 
Sbjct: 308 SQIRSYVLDD-SRIKDLRTSVETRNTQAVLDGDLDKFIEASLK 349


>gi|254261824|ref|ZP_04952878.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 1710a]
 gi|254220513|gb|EET09897.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 1710a]
          Length = 367

 Score =  285 bits (730), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 179/351 (50%), Positives = 250/351 (71%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L R+   L G   +D   +RL+ +N + EDP++W +   A+ L RE++ L++ ++ +  +
Sbjct: 16  LRRRAGELRGYLCYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLESVVTTLTAL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L ELA EE D   L  T  +  +++  V   +F  + S  AD N+ ++++ 
Sbjct: 76  DNDLRDAQALFELAHEEGDEETLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK+AT+ + G  AYG+L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++L+E EL+KR+   +  ESS
Sbjct: 256 INKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESS 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF+ A+L  
Sbjct: 316 KTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTKAVLDGDLDDFISASLKQ 365


>gi|158425248|ref|YP_001526540.1| peptide chain release factor 2 [Azorhizobium caulinodans ORS 571]
 gi|158332137|dbj|BAF89622.1| peptide chain release factor 2 [Azorhizobium caulinodans ORS 571]
          Length = 376

 Score =  285 bits (730), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 204/353 (57%), Positives = 268/353 (75%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +++  ++ L    + D + +RL+ LN   EDP LW +   A+ +M+ER  L++A++ I  
Sbjct: 11  EINASVDLLRQHLNVDRSRRRLAELNAIAEDPTLWDDPERAQKIMQERTSLEDALNAIDR 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I   L DN+ L+EL   E D S++ E +  L  +K E+  ++ ++LLSGEADSND YLEV
Sbjct: 71  ITRDLTDNIELIELGEAEGDESVITEAAGALDALKAELARRELDALLSGEADSNDTYLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGT+SQDWA MLLRMY RW E+  FK E ++   GE+AG+KSAT+++KG NAYGWL
Sbjct: 131 HAGAGGTDSQDWAEMLLRMYRRWCERHGFKVELVDESAGEQAGLKSATIIVKGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DSN+RR TSF+SI VYPV+DD I +EI+ESD R+DT R+ GAGGQ
Sbjct: 191 KTEAGVHRLVRISPFDSNARRQTSFASIDVYPVIDDRIVVEINESDVRVDTMRSGGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVR+THIPTG+ V  Q +RSQHKN+A AWNMLRAKL+E+EL+KREE A   ++
Sbjct: 251 HVNKTESAVRLTHIPTGIAVVSQGDRSQHKNRATAWNMLRAKLFEMELKKREEAAAAEQA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           ++T+IGWG QIRSYVLQPYQ+VKDLRT +   +P +VLDGDLD FM+A LA +
Sbjct: 311 ARTDIGWGHQIRSYVLQPYQLVKDLRTGVTSGTPQEVLDGDLDPFMEAALAQR 363


>gi|24638154|sp|Q8ZHK4|RF2_YERPE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|115346673|emb|CAL19556.1| peptide chain release factor 2 [Yersinia pestis CO92]
          Length = 366

 Score =  285 bits (730), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 186/352 (52%), Positives = 240/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           LS +   L G   D+D   +RL  +N + E P +W     A+ L +ER  L+  ++ I +
Sbjct: 14  LSDRTAVLRGYLCDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSTLEEIVTTIDQ 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D   LLELA+E DD     ET   L+ +  ++   +F  + SGE D  + YL++
Sbjct: 74  LEQGLEDVSGLLELAVEADDEETFNETIAELEVLDGKLGQLEFRRMFSGEYDRANCYLDL 133

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  DG+ AG+KSAT+ I G  A+GWL
Sbjct: 134 QAGSGGTEAQDWASMLLRMYLRWAESRGFKTEIIEESDGDVAGLKSATVKIIGEYAFGWL 193

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQ
Sbjct: 194 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQ 253

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E 
Sbjct: 254 HVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLED 313

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 314 NKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 364


>gi|284048024|ref|YP_003398363.1| peptide chain release factor 2 [Acidaminococcus fermentans DSM
           20731]
 gi|283952245|gb|ADB47048.1| peptide chain release factor 2 [Acidaminococcus fermentans DSM
           20731]
          Length = 366

 Score =  285 bits (730), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 168/354 (47%), Positives = 232/354 (65%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +L  L G        +R+  L  +   P  W +  +A+ + +E  +L   +     
Sbjct: 12  QLKDKLEELKGGLKIAQKEERIEDLEHQMAAPGFWDDPDKAQTVAQEANNLKTEVETYHG 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  +L D   L E+A+EE D S+  E  + ++  +  +   +   LLS + D+N+A L +
Sbjct: 72  LAAKLDDVETLWEMAMEEKDDSLQGEIEEEVENARKTLADLELGMLLSDQYDANNAILTL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTE+QDW NMLLRMYTR+AE++ F  E L++  GEEAGIKSATL ++G NAYG+L
Sbjct: 132 HAGAGGTEAQDWTNMLLRMYTRYAEQKGFTVELLDVLPGEEAGIKSATLTVQGHNAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+D+N+RRHTSF+++ V P +D+++E+ ++  D R+D YRASGAGGQ
Sbjct: 192 KSEKGVHRLVRISPFDANARRHTSFAAVDVMPELDETVEVNLNMDDVRVDYYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T SAVR+THIPTG+VVQCQ ERSQ +NK +   +LRAKLYE E   +++  +    
Sbjct: 252 HVNKTSSAVRMTHIPTGIVVQCQNERSQLQNKERCLALLRAKLYEYEKAIQDKKISELAG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               I WG QIRSYV QPY MVKD RT  E  +   V+DGDLD F++A L   K
Sbjct: 312 DYQAIEWGSQIRSYVFQPYTMVKDHRTGAETGNIQAVMDGDLDPFVEAYLRSLK 365


>gi|294084599|ref|YP_003551357.1| protein chain release factor B [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664172|gb|ADE39273.1| Protein chain release factor B [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 369

 Score =  285 bits (730), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 210/352 (59%), Positives = 267/352 (75%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S  L  L    +++ AV RL+ L  +T  P  W +   A+ +MRE+  L+  I+ IK++
Sbjct: 12  ISSTLELLRKHVNFEVAVARLNDLEAQTTMPDFWNDQAVAQDVMREKNRLERQINLIKDM 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           Q  + D + L+EL + E D  ++ E    L ++  E + +Q ESLLSGEAD+ND +LE+H
Sbjct: 72  QAEMDDCVALIELGIAEGDDDVVAEAEAVLTKLVTEADKRQLESLLSGEADANDCFLEIH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA ML+RMY RW E+R +K   +E   GEEAGIKS T+ I G NAYGWLK
Sbjct: 132 AGAGGTEAQDWAQMLVRMYGRWCEQRGYKVHLIEESAGEEAGIKSVTMRIDGENAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS++RRHTSF+S WVYPVVDD+IEIE+ + D RIDTYRASGAGGQH
Sbjct: 192 TESGVHRLVRISPYDSSARRHTSFASAWVYPVVDDNIEIEVEDKDLRIDTYRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSA+RITH+PT +VVQCQ +RSQH+N+A A+NML+A+LYELELQKREE A+   +S
Sbjct: 252 VNKTDSAIRITHLPTNIVVQCQNDRSQHRNRATAFNMLKARLYELELQKREEAASDAAAS 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KT+IGWG QIRSYVL PYQMVKDLRTN+EK +   VLDGDLD F++A+LA +
Sbjct: 312 KTDIGWGNQIRSYVLHPYQMVKDLRTNVEKGNAQGVLDGDLDSFIEASLAAR 363


>gi|224824516|ref|ZP_03697623.1| peptide chain release factor 2 [Lutiella nitroferrum 2002]
 gi|224603009|gb|EEG09185.1| peptide chain release factor 2 [Lutiella nitroferrum 2002]
          Length = 349

 Score =  285 bits (730), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 181/344 (52%), Positives = 239/344 (69%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D    RL  +   TEDP +W +   A+ L RER+ L++ +  I  I   + D+
Sbjct: 5   FGGIFDYDGKCDRLEEVVRLTEDPDVWNDPKRAQDLGRERKQLEDVVLVIDRISGAVNDS 64

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L ++A EE+D   +    D+L   + ++   +F  +     D N+ +L++ AGAGGTE
Sbjct: 65  RDLFDMAREENDADTILAVQDDLAEAEAKLAQLEFRRMFHDPMDPNNCFLDIQAGAGGTE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA MLLRMYTR+AE++ F+ E LE  +GE AGI SATL I G  AYG L+ E GVHR
Sbjct: 125 AQDWAGMLLRMYTRYAERKGFRVEILEESEGEVAGITSATLKISGEYAYGLLRTEVGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR+SP+DSN+RRHTSFSS++VYP VDDS  IEI+ +D R+DTYRASGAGGQH+N TDSA
Sbjct: 185 LVRVSPFDSNARRHTSFSSVFVYPEVDDSFVIEINPADLRVDTYRASGAGGQHINKTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH PTG+VVQCQ +RSQH+N+ +A  MLRAKLYELEL+KR E     E +KT++GWG
Sbjct: 245 VRITHNPTGIVVQCQNDRSQHRNRDEAMQMLRAKLYELELKKRNEAKQALEDTKTDVGWG 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSYV      +KDLRT+ E  +   V+DGDLD F++ +L  
Sbjct: 305 HQIRSYVFD-QSRIKDLRTSYEVGNIKSVMDGDLDGFIEESLKQ 347


>gi|260582141|ref|ZP_05849935.1| peptide chain release factor 2 [Haemophilus influenzae NT127]
 gi|260094773|gb|EEW78667.1| peptide chain release factor 2 [Haemophilus influenzae NT127]
          Length = 351

 Score =  285 bits (730), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 184/347 (53%), Positives = 246/347 (70%), Gaps = 1/347 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L C GG+FD+D  V+RL  +N + E P +W    +A+ L +ER  L+  ++ IK ++  L
Sbjct: 4   LRCFGGIFDFDAKVERLEEVNAELEQPDVWNAPDKAQTLGKERVSLEQVVNTIKNLEQGL 63

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LLELA+E +D     E    L  ++ ++E  +F  + SGE D+ D Y+++ AG+G
Sbjct: 64  EDVDGLLELAIEAEDEDTFHEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVDLQAGSG 123

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW  MLLRMY RW E + FKTE +E+ DG+ AG+KSAT+ + G  A+GWL+ E G
Sbjct: 124 GTEAQDWTEMLLRMYLRWTESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETG 183

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T
Sbjct: 184 IHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKT 243

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+       E +K++I
Sbjct: 244 ESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDI 303

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           GWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 304 GWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 349


>gi|192291110|ref|YP_001991715.1| hypothetical protein Rpal_2731 [Rhodopseudomonas palustris TIE-1]
 gi|192284859|gb|ACF01240.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
          Length = 376

 Score =  285 bits (730), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 215/353 (60%), Positives = 274/353 (77%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + +  L    D D +  RL+ LN   EDP LW +  +A+ LM+ER  L+++++ I +
Sbjct: 11  EIKQSVGLLRRHLDVDQSTVRLAELNKLAEDPDLWNDPQKAQKLMQERTSLEDSLTGIGK 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L DN+ ++EL   E D  I++E  D L+ +K EV  ++ E+LLSGEAD  D YLEV
Sbjct: 71  VERELTDNIEMIELGEAEGDEGIVKEAEDALKALKKEVARRELEALLSGEADRFDTYLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA+MLLRMY RWAEK  FK E LE  +GEEAGIKSAT+ I G NAYGWL
Sbjct: 131 HAGAGGTESQDWASMLLRMYVRWAEKHGFKIEYLEESEGEEAGIKSATIQISGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DSN+RRHTSFSS+ ++PV+D+SI+I+I+ESD R+DT R+ GAGGQ
Sbjct: 191 KTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDNSIKIDIAESDVRVDTMRSGGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVR+THIPTGV V CQ  RSQHKN+AQAW+MLRA+LYE+EL+KREE A   ++
Sbjct: 251 HVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLYEIELKKREEQAAADQA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +KTEIGWG QIRSYVLQPYQMVKDLRT ++ +  + VLDGDLD+FM ATLA +
Sbjct: 311 AKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDEFMAATLAQR 363


>gi|172087665|ref|YP_203835.2| peptide chain release factor RF-2 [Vibrio fischeri ES114]
 gi|229576704|sp|Q5E7P9|RF2_VIBF1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|171902260|gb|AAW84947.2| peptide chain release factor RF-2 [Vibrio fischeri ES114]
          Length = 365

 Score =  285 bits (730), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 178/350 (50%), Positives = 241/350 (68%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S + N L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  I  +
Sbjct: 14  VSERTNILRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERASLEAVVETIDLL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + D   LLELA+EE+D     E    L  ++ ++   +F  + SG+ D++D Y+++ 
Sbjct: 74  DQGVEDVDGLLELAVEEEDQETFDEIEPELAELEAKLAKLEFRRMFSGDHDASDCYIDLQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +G+GGTE+QDW +M+LRMY RWAE + FK E +E+ +GE AG+K AT+ I G  AYGWL+
Sbjct: 134 SGSGGTEAQDWTSMMLRMYLRWAEAKGFKVEVIEVSEGEVAGLKGATVRIAGEYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I+I+I+ SD RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNIQIDINPSDLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT+SAVRITH+PT +VVQCQ +RSQHKNK QA   LRAKL+E ELQK+       E +
Sbjct: 254 VNTTESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLRAKLFEYELQKQNAEKQANEDA 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K++IGWG QIRSYVL     +KDLRT IE  +   VLDGDLD F++A+L 
Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDKFIEASLK 362


>gi|296134253|ref|YP_003641500.1| hypothetical protein TherJR_2767 [Thermincola sp. JR]
 gi|296032831|gb|ADG83599.1| hypothetical protein TherJR_2767 [Thermincola potens JR]
          Length = 371

 Score =  285 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 170/355 (47%), Positives = 240/355 (67%), Gaps = 1/355 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           ++L+ +L  L    D    V+ ++ L  KT +   W N +EA+ +MRE   L + I    
Sbjct: 10  IELAERLEELRVSLDIAGKVRAVNALEEKTAEQGFWDNPVEAQKVMREINDLKDTIGLYN 69

Query: 61  EIQDRLCDNLILLEL-ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
            ++ +  D   L EL   ++D   I +E + +++ ++  VE  +   LL  + D  +A +
Sbjct: 70  TLKRQYDDVYTLWELGMEDDDPDEIEKEVARDIRHLRHNVEQAELTLLLGDKYDKGNAII 129

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            +HAGAGGTE+QDW  MLLRMYTRWAE++ +K + L++  G+EAGIKSA++ I+GP AYG
Sbjct: 130 SLHAGAGGTEAQDWVQMLLRMYTRWAEEKGYKIDTLDLLPGDEAGIKSASISIEGPYAYG 189

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           +LK E+GVHRLVRISP+D++ RRHTSF+S+ V P VDD  EI I  +D RIDT+R+ GAG
Sbjct: 190 YLKSEKGVHRLVRISPFDASGRRHTSFASVDVLPEVDDETEIVIDPADLRIDTFRSGGAG 249

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQHVN TDSAVRITHIPTG+VVQCQ ERSQH N+ +A  +L+A+L +LE++K+EE  N  
Sbjct: 250 GQHVNKTDSAVRITHIPTGIVVQCQNERSQHSNRLKAMKLLQARLLDLEIKKKEEELNKL 309

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              + EI WG QIRSYV  PY +VKD RT +E  +   V+DG++D+F+ A L  +
Sbjct: 310 RGEQQEIAWGSQIRSYVFHPYSLVKDHRTGVETGNVQAVMDGEIDEFIAAYLKSR 364


>gi|269850236|gb|ACZ49981.1| peptide chain release factor 2, programmed frameshift [Bacillus
           anthracis str. Ames]
          Length = 365

 Score =  285 bits (729), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 170/353 (48%), Positives = 227/353 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L    G        ++++ L  K      W +   A+ ++ E   L + +   ++
Sbjct: 12  KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   +  I  EL  EE D  + +E    ++ +  E+   + + LLS   D N A LE+
Sbjct: 72  LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNKAILEL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAEKR FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 132 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P  +D +EIE+   D +IDTYRASGAGGQ
Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PT  VV CQ ERSQ KN+  A  ML+AKLY+ +L++++   +    
Sbjct: 252 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EIGWG QIRSYV  PY +VKD RTN E  +   V+DG++D F+ A L  +
Sbjct: 312 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 364


>gi|217962667|ref|YP_002341241.1| peptide chain release factor 2 [Bacillus cereus AH187]
          Length = 380

 Score =  285 bits (729), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 171/353 (48%), Positives = 228/353 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L    G        ++++ L  K      W +   A+ ++ E   L + +   ++
Sbjct: 27  KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGSFRQ 86

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   +  I  EL  EE D  + +E    ++ +  E+   + + LLS   D N+A LE+
Sbjct: 87  LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAEKR FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P  +D +EIEI   D +IDTYRASGAGGQ
Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEIRTEDLKIDTYRASGAGGQ 266

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PT  VV CQ ERSQ KN+  A  ML+AKLY+ +L++++   +    
Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EIGWG QIRSYV  PY +VKD RTN E  +   V+DG++D F+ A L  +
Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379


>gi|307822369|ref|ZP_07652601.1| peptide chain release factor 2 [Methylobacter tundripaludum SV96]
 gi|307736935|gb|EFO07780.1| peptide chain release factor 2 [Methylobacter tundripaludum SV96]
          Length = 347

 Score =  285 bits (729), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 175/343 (51%), Positives = 248/343 (72%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+D   +RL  +  + E+P +W N  EA+ L +ER  L+  ++ I +++  L D 
Sbjct: 3   LGGIFDFDVKSERLVEVLRELENPKIWDNPEEAQALGKERGQLEVIVNTINDLERGLSDA 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LL +A+EEDD   ++   D+L+  +  V   +F  + SG+ D+N+A+L++ +G+GGTE
Sbjct: 63  EELLLMAVEEDDEETVETVVDDLEHFEKRVADLEFRRMFSGQMDANNAFLDIQSGSGGTE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA+++ RMY RW E++ FKTE +E   G+ AGIKSAT+  +G  A+GWL+ E GVHR
Sbjct: 123 AQDWASIIERMYLRWGEQKGFKTELIEESQGDVAGIKSATIKFEGEYAFGWLRTETGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS +RRHTSF+S++V P +DD I+I+I+ +D R+D YRASGAGGQH+N T+SA
Sbjct: 183 LVRKSPFDSGNRRHTSFASVFVSPEIDDDIDIDINPADIRVDVYRASGAGGQHINKTESA 242

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+TH PTG+VVQCQ +RSQHKN+  A   L+AKLYELE++KR E A   E +K++IGWG
Sbjct: 243 VRMTHNPTGIVVQCQSDRSQHKNRDTAMKQLKAKLYELEMRKRSETAQALEDTKSDIGWG 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL     +KDLRTN+E  +   VLDGDLD F++A+L 
Sbjct: 303 SQIRSYVLD-QSRIKDLRTNVETGNTQAVLDGDLDQFIEASLK 344


>gi|73914009|sp|Q9CP66|RF2_PASMU RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 365

 Score =  285 bits (729), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 179/351 (50%), Positives = 244/351 (69%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +   L G  D+D  V+RL  +N + E P +W    +A+ L +ER  L+  ++ I  +
Sbjct: 14  LTERTQVLRGYLDFDAKVERLEEVNAELEQPDVWNEPEKAQALGKERVALEGVVNTIHTL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA+E +D +   E    L+ ++ ++   +F  + SG+ D+ D Y+++ 
Sbjct: 74  DQGLEDVEGLLELAIEAEDEATFHEAVAELEELEQQLAKLEFRRMFSGQHDAADCYVDLQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AGIKSAT+ + G  A+GWL+
Sbjct: 134 AGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGIKSATIKVSGEYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+I+I+ +D RID YRASGAGGQH
Sbjct: 194 TETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIDINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIP+G+VVQCQ +RSQHKNK Q    L+AKLYE+ELQK+       E +
Sbjct: 254 VNKTESAVRITHIPSGIVVQCQNDRSQHKNKDQCMKQLKAKLYEMELQKKNADKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 363


>gi|297618035|ref|YP_003703194.1| hypothetical protein Slip_1875 [Syntrophothermus lipocalidus DSM
           12680]
 gi|297145872|gb|ADI02629.1| hypothetical protein Slip_1875 [Syntrophothermus lipocalidus DSM
           12680]
          Length = 371

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 164/353 (46%), Positives = 230/353 (65%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ ++L  +GG  D +    R+  L  KT  P  W +  EA+ +++E   L   +   + 
Sbjct: 12  EIKKRLEEIGGSLDVEGLKHRIKKLEDKTCQPGFWDDNQEAQKVVKEMSGLKERVDSYES 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   + D   LLELA  E+D  + +E +  L R+       +   +  GE D ++A + +
Sbjct: 72  LVREIEDISALLELAEAEEDEELYREAAAELARLNRRFREYELSIMFKGEHDDSNAIVSL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGT++QDW  MLLRMYTRWAE   ++ + ++   GEEAGIKS TLLIKG  AYG +
Sbjct: 132 HAGAGGTDAQDWVEMLLRMYTRWAEDNGYEVDIMDYLPGEEAGIKSVTLLIKGKYAYGKM 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRL+R+SP+D++ RRHTSF+ + V P + D +E+ IS  D RIDT+RA GAGGQ
Sbjct: 192 RAEAGVHRLIRVSPFDASGRRHTSFALVSVLPEIQDDVEVTISSDDLRIDTFRAGGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITH+P+G+VVQCQ ERSQ+ NK  A  +LRAKLYEL+ +++EE     + 
Sbjct: 252 HVNKTDSAVRITHLPSGIVVQCQNERSQYANKLAAMKILRAKLYELKQREQEESLQKLKG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              EI WG QIR+YVL P+ +VKD RT +E  + + VLDGD++DF+ A L  K
Sbjct: 312 EYKEIAWGNQIRTYVLNPFSLVKDHRTGLEVGNVNAVLDGDINDFITAYLGQK 364


>gi|218906362|ref|YP_002454196.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus AH820]
 gi|218540032|gb|ACK92430.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus AH820]
          Length = 380

 Score =  285 bits (728), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 170/353 (48%), Positives = 228/353 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L    G        ++++ L  K      W +   A+ ++ E   L + +   ++
Sbjct: 27  KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 86

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   +  I  EL  EE D  + +E    ++ +  E+   + + LLS   D N+A LE+
Sbjct: 87  LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAEKR FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P  +D +EIE+   D +IDTYRASGAGGQ
Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 266

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PT  VV CQ ERSQ KN+  A  ML+AKLY+ +L++++   +    
Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EIGWG QIRSYV  PY +VKD RTN E  +   V+DG++D F+ A L  +
Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379


>gi|258517064|ref|YP_003193286.1| peptide chain release factor 2 [Desulfotomaculum acetoxidans DSM
           771]
 gi|257780769|gb|ACV64663.1| bacterial peptide chain release factor 2 (bRF- 2) [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 366

 Score =  285 bits (728), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 172/353 (48%), Positives = 234/353 (66%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS ++  L    D       +  L+     P  W +  +A+ + R++  L +++S   E
Sbjct: 11  ELSGRVADLRVSLDIAGKESEIEKLDKLMMAPGFWDDQAQAQKISRQQAVLKDSVSLYGE 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D  +L ELA EEDD   L+ET+ +L++++L V   + + LLSGE D  +A + +
Sbjct: 71  LRQSLEDLEVLAELAQEEDDDIALRETAKDLKQLELRVSELELDVLLSGEYDRGNAIISL 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTE+QDW  MLLRM+TRWAE  +++   L++  G+EAGIKS T+ I GPNA+G+L
Sbjct: 131 HAGAGGTEAQDWVEMLLRMFTRWAEDHRYRVIVLDMLSGDEAGIKSVTVEIVGPNAFGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+D+  RRHTSF+S+ V P VD+ ++IEI   D +IDT+RA GAGGQ
Sbjct: 191 KSEKGVHRLVRISPFDTAGRRHTSFASVEVLPEVDEDVDIEIKTEDLKIDTFRAGGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITH+PTG+VV CQ ERSQ  N+  A  +L+AKL ELELQK+E        
Sbjct: 251 HVNKTDSAVRITHLPTGIVVSCQNERSQLSNRNSAMKLLKAKLAELELQKKEAEMASLRG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              EI WG QIRSYV  PY +VKD RT  E  +   V++G+LD FM A L  +
Sbjct: 311 DHQEIAWGSQIRSYVFHPYSLVKDHRTGAETGNIEAVMNGELDKFMAAFLLWQ 363


>gi|291613970|ref|YP_003524127.1| hypothetical protein Slit_1503 [Sideroxydans lithotrophicus ES-1]
 gi|291584082|gb|ADE11740.1| conserved hypothetical protein [Sideroxydans lithotrophicus ES-1]
          Length = 367

 Score =  285 bits (728), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 177/351 (50%), Positives = 249/351 (70%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + N L    D+D+  +RL+ +N   EDP +W +   A+ L RER+ L++ +  +  I
Sbjct: 16  LRNRSNELRRFLDFDSKQERLAEVNQLAEDPAIWNDAKRAQELGRERKSLEDVVLGLIRI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   L E+A  E+D   L   + ++Q I+  V   +F  + S  AD N+ ++++ 
Sbjct: 76  SQNLDDAAELFEMAQAENDDDSLNSIAADVQDIETRVAALEFRRMFSNPADPNNCFIDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y ++ E++ FK E LE  DG+ AGI+SA+L ++G  AYG L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLKYCERKGFKVEVLEQTDGDVAGIRSASLKVEGEYAYGHLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+  RHTSF+S++V P VDDSIE++I+ +D RIDT+RASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASLFVSPEVDDSIEVDINPADLRIDTFRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSA+RITH PTG+VVQCQ +RSQH+NKA+A +ML+++LYELEL+KR+  A+  E+S
Sbjct: 256 INKTDSAIRITHQPTGIVVQCQNDRSQHRNKAEAMSMLKSRLYELELRKRQSEADKLEAS 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 316 KTDVGWGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDPFIEASLKQ 365


>gi|15642771|ref|NP_230312.1| peptide chain release factor 2 [Vibrio cholerae O1 biovar El Tor
           str. N16961]
          Length = 365

 Score =  285 bits (728), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 183/350 (52%), Positives = 243/350 (69%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S + N L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++
Sbjct: 14  VSERTNILRGYLDYDAKKERLEEVNAELEQPDVWTQPERAQALGKERSALEAVVDTIDQL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + D   LLELA+E +D     E    L  ++ ++E  +F  + SG+ DS+D YL++ 
Sbjct: 74  DRGVDDVEGLLELAIEAEDQETFDEIGPELDELEAKLEQLEFRRMFSGDHDSSDCYLDLQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSF+S ++YP VD++I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+       E +
Sbjct: 254 VNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDA 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K++IGWG QIRSYVL     +KDLRT IE  +   VLDGDLD F++A+L 
Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDKFIEASLK 362


>gi|301156116|emb|CBW15587.1| peptide chain release factor RF-2 [Haemophilus parainfluenzae T3T1]
          Length = 347

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 182/345 (52%), Positives = 244/345 (70%), Gaps = 1/345 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           C GG+FD+D  V+RL  +N + E P +W    +A+ L +ER  L+  +  IK ++  L D
Sbjct: 2   CFGGIFDFDAKVERLEEVNAELEQPDVWNEPEKAQALGKERVSLEQVVDTIKNLEQGLED 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              LLELA+E +D     E    L  ++ ++   +F  + SGE D+ D Y+++ AG+GGT
Sbjct: 62  VEGLLELAVEAEDEETFNEAVAELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G  A+GWL+ E G+H
Sbjct: 122 EAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIRVSGEYAFGWLRTETGIH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+S
Sbjct: 182 RLVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTES 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+       E +K++IGW
Sbjct: 242 AVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGW 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           G QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 302 GSQIRSYVLDD-ARIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 345


>gi|283777745|ref|ZP_06344221.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus NVH0597-99]
 gi|283645392|gb|EFC27417.1| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus NVH0597-99]
          Length = 380

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 171/353 (48%), Positives = 228/353 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L    G        ++++ L  K      W +   A+ ++ E   L + +   ++
Sbjct: 27  KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 86

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   +  I  EL  EE D  + +E    ++ +  E+   + + LLS   D N+A LE+
Sbjct: 87  LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAEKR FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P  +D +EIEI   D +IDTYRASGAGGQ
Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEIRTEDLKIDTYRASGAGGQ 266

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PT  VV CQ ERSQ KN+  A  ML+AKLY+ +L++++   +    
Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EIGWG QIRSYV  PY +VKD RTN E  +   V+DG++D F+ A L  +
Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379


>gi|77359475|ref|YP_339050.1| peptide chain release factor 2 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|123589557|sp|Q3ILD8|RF2_PSEHT RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|76874386|emb|CAI85607.1| peptide chain release factor 2 (RF-2) [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 365

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 180/351 (51%), Positives = 234/351 (66%), Gaps = 1/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++  +   L G  D+    +RL  +N + ED  +W     A+ L RE+  L+  +  I  
Sbjct: 13  EIRERTELLRGYLDYALKQERLEEVNAELEDSAVWNEPERAQALGREKSALEAVVETIDT 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +     D   LLELA+E +D     E    L  +  ++E  +F  + SG  DSNDAYL++
Sbjct: 73  LVTGTDDVEGLLELAVEAEDQETFDEAQSELADLNEQLEALEFRRMFSGPHDSNDAYLDL 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GGTE+QDW N+LLRMY RW E + FK E +E   G+ AGIK AT+   G  AYGWL
Sbjct: 133 QSGSGGTEAQDWCNILLRMYLRWGEAKGFKVELVEATGGDVAGIKGATVRFVGEYAYGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS+ RRHTSF+S +VYP VDD+IEI+++ SD RID YRASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSSGRRHTSFASAFVYPEVDDNIEIDMNPSDLRIDVYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTT+SAVRITH+PT  VVQCQ ERSQHKNKAQA   L+AKL+ELELQ++       E 
Sbjct: 253 HVNTTESAVRITHVPTNTVVQCQNERSQHKNKAQAMKQLKAKLFELELQQQNAEKQTQED 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SK++IGWG QIRSYVL     +KDLRT +E  +   VLDG+LD F++A+L 
Sbjct: 313 SKSDIGWGSQIRSYVLDD-ARIKDLRTGVESRNTQSVLDGNLDKFIEASLK 362


>gi|194365600|ref|YP_002028210.1| peptide chain release factor 2 [Stenotrophomonas maltophilia
           R551-3]
 gi|238693429|sp|B4SHV0|RF2_STRM5 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|194348404|gb|ACF51527.1| conserved hypothetical protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 374

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 179/351 (50%), Positives = 240/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ ++  L G  D+D   +RL  +  + E P +W N   A+ L RER  L+  +  I  +
Sbjct: 14  LTDRVLSLRGYLDYDAKKERLEEVTRELESPDVWNNAEYAQNLGRERSSLEKTVGGIASV 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            D L D   LLELA  E D         +L + +  VE  +F+ + SGE D+  A++++ 
Sbjct: 74  LDGLADATELLELAESEQDEDTALAVVADLDKHQAHVEKLEFQRMFSGEMDNAAAFVDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA +LLRMY RW E R +KTE +E+  G+ AGIKSATL ++G  AYGWLK
Sbjct: 134 AGAGGTEAQDWAEILLRMYLRWCESRGWKTELMEVSGGDVAGIKSATLRVEGDYAYGWLK 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS++RRHTSF+S++V P +DD+I+I I+ +D R D YR+SGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSDNRRHTSFTSVFVSPEIDDNIDITINPADLRTDVYRSSGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT +VV CQ  RSQH+N+  A  ML AKLYELE+QKR    +  E++
Sbjct: 254 VNKTESAVRITHIPTNIVVACQTGRSQHQNRDNAMKMLAAKLYELEIQKRNAEKDAVEAT 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIR+YVL     +KDLRT IE++    VLDGDLD+F++A+L  
Sbjct: 314 KSDIGWGSQIRNYVLD-QSRIKDLRTGIERSDTQKVLDGDLDEFVEASLKA 363


>gi|157162351|ref|YP_001459669.1| peptide chain release factor 2 [Escherichia coli HS]
 gi|166977373|sp|A8A432|RF2_ECOHS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|157068031|gb|ABV07286.1| peptide chain release factor 2 [Escherichia coli HS]
          Length = 365

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 184/351 (52%), Positives = 237/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G   +D   +RL  +N + E P +W     A+ L +ER  L+  +  + ++
Sbjct: 14  LTERSDVLRGYLCYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ 
Sbjct: 74  KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|227817946|ref|YP_002817955.1| peptide chain release factor 2, programmed frameshift [Bacillus
           anthracis str. CDC 684]
 gi|229604792|ref|YP_002869406.1| peptide chain release factor 2, programmed [Bacillus anthracis str.
           A0248]
 gi|227003828|gb|ACP13571.1| peptide chain release factor 2, programmed frameshift [Bacillus
           anthracis str. CDC 684]
 gi|229269200|gb|ACQ50837.1| peptide chain release factor 2, programmed [Bacillus anthracis str.
           A0248]
          Length = 380

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 170/353 (48%), Positives = 227/353 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L    G        ++++ L  K      W +   A+ ++ E   L + +   ++
Sbjct: 27  KMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGKFRQ 86

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   +  I  EL  EE D  + +E    ++ +  E+   + + LLS   D N A LE+
Sbjct: 87  LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNKAILEL 146

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAEKR FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P  +D +EIE+   D +IDTYRASGAGGQ
Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQ 266

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PT  VV CQ ERSQ KN+  A  ML+AKLY+ +L++++   +    
Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EIGWG QIRSYV  PY +VKD RTN E  +   V+DG++D F+ A L  +
Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379


>gi|56478734|ref|YP_160323.1| peptide chain release factor 2 [Aromatoleum aromaticum EbN1]
 gi|81598559|sp|Q5NZU2|RF2_AZOSE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|56314777|emb|CAI09422.1| peptide chain release factor 2 (RF-2),gene containing programmed
           frameshift site [Aromatoleum aromaticum EbN1]
          Length = 367

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 179/351 (50%), Positives = 240/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +   L    D+D    +L  +    EDP +W N  +A+ L +E++ L++ +  +++I
Sbjct: 16  LRARGRELRRYLDYDEKSSKLEEVTRALEDPAVWNNAEKAQELGKEKRQLEDVVHNLRDI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D   L +LA  EDD   L     ++  ++ +V   +F  + S   D N  ++E+ 
Sbjct: 76  ESLSSDLKDLFDLAEAEDDEDTLAAVEADIGELQAKVHALEFRRMFSNPMDPNPCFIEIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA ML RMY R+ E++ F  E +E  +GE AGIK AT+ + G  AYG+L+
Sbjct: 136 AGAGGTEAQDWAGMLERMYLRYCERKGFNVELMEESEGEVAGIKGATIKVSGDYAYGFLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DSN+RRHTSFSS++VYP VDDSI+I+I+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGIHRLVRKSPFDSNARRHTSFSSVFVYPEVDDSIQIDINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTGVVVQCQ +RSQHKNKA+A +ML+A+LYELEL+KR+      E S
Sbjct: 256 INKTDSAVRITHEPTGVVVQCQNDRSQHKNKAEAMSMLKARLYELELRKRQSEQQKLEDS 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRTN E  +   VLDGDLDDF+ A+L  
Sbjct: 316 KSDIGWGHQIRSYVLD-QSRIKDLRTNFEVGNTQAVLDGDLDDFIAASLKQ 365


>gi|267847202|gb|ACJ79637.2| peptide chain release factor 2, programmed frameshift [Bacillus
           cereus AH187]
          Length = 380

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 171/353 (48%), Positives = 228/353 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++++L    G        ++++ L  K      W +   A+ ++ E   L + +   ++
Sbjct: 27  KMAKRLAAFRGSLYLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKDMVGSFRQ 86

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +   +  I  EL  EE D  + +E    ++ +  E+   + + LLS   D N+A LE+
Sbjct: 87  LDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDPYDKNNAILEL 146

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAEKR FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 147 HPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 206

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS+ RRHTSF S  V P  +D +EIEI   D +IDTYRASGAGGQ
Sbjct: 207 KAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDEVEIEIRTEDLKIDTYRASGAGGQ 266

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PT  VV CQ ERSQ KN+  A  ML+AKLY+ +L++++   +    
Sbjct: 267 HVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRG 326

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EIGWG QIRSYV  PY +VKD RTN E  +   V+DG++D F+ A L  +
Sbjct: 327 EQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSR 379


>gi|304396712|ref|ZP_07378592.1| peptide chain release factor 2 [Pantoea sp. aB]
 gi|304355508|gb|EFM19875.1| peptide chain release factor 2 [Pantoea sp. aB]
          Length = 351

 Score =  284 bits (726), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 179/344 (52%), Positives = 237/344 (68%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D   +RL  +N + E P++W     A+ L +ER  L+  +  + ++   L D 
Sbjct: 7   FGGIFDYDAKKERLEEVNAELEQPYVWNEPERAQALGKERSSLEAIVQTLDQMSQGLEDV 66

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+E +D     E    L  ++ ++   +F  + SGE DS D Y+++ AG+GGTE
Sbjct: 67  QGLLELAVEAEDEETFDEAVAELDVLEGKLGELEFRRMFSGEYDSADCYIDLQAGSGGTE 126

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA+ML+RMY RWAE + FKTE +E  +GE AGIKS T+ + G  A+GWL+ E GVHR
Sbjct: 127 AQDWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAFGWLRTETGVHR 186

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS  RRHTSFSS ++YP VDD I+I+I+ +D RID YRASGAGGQHVN T+SA
Sbjct: 187 LVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESA 246

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG
Sbjct: 247 VRITHIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQALEDNKSDIGWG 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 307 SQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDRFIEASLKA 349


>gi|262373739|ref|ZP_06067017.1| peptide chain release factor 2 [Acinetobacter junii SH205]
 gi|262311492|gb|EEY92578.1| peptide chain release factor 2 [Acinetobacter junii SH205]
          Length = 351

 Score =  284 bits (726), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 177/346 (51%), Positives = 240/346 (69%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD+D   +RL  +  + EDP +W +   A+ + +E+  L+N +     + ++L 
Sbjct: 5   KHYGGIFDYDLKAERLEEVLRELEDPAIWNDQSRAQAIAKEKGSLENTLGVFDRLAEQLD 64

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   +L+LA+E DD S+L++    L   +  +   +F  + S   D N  +LE+ +G+GG
Sbjct: 65  DAKAMLDLAVEADDESLLEDVQAELDSAEQALGNLEFRRMFSNPMDPNPCFLEIQSGSGG 124

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDWA+MLLRMY RW E+  FK E +E+ DG+ AGIKSAT+ + G  AYGWL+ E GV
Sbjct: 125 TEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAGIKSATIRVDGEFAYGWLRTESGV 184

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DSN+ RHTSFS+++V P +DD+IEI+I+ SD R DTYRASGAGGQH+N TD
Sbjct: 185 HRLVRKSPFDSNNNRHTSFSAVFVSPEIDDNIEIDINPSDVRTDTYRASGAGGQHINKTD 244

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+VV CQ +RSQH N+  AW  LRAKLYELE+ KR E A   E SK++IG
Sbjct: 245 SAVRLTHAPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMSKRNEAAQALEDSKSDIG 304

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSYVL     +KDLRT +E ++   VLDGDLD F++A+L  
Sbjct: 305 WGSQIRSYVLDD-SRIKDLRTGVENSNTKAVLDGDLDKFIEASLKQ 349


>gi|113969170|ref|YP_732963.1| peptide chain release factor 2 [Shewanella sp. MR-4]
 gi|114048688|ref|YP_739238.1| peptide chain release factor 2 [Shewanella sp. MR-7]
 gi|113883854|gb|ABI37906.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella sp.
           MR-4]
 gi|113890130|gb|ABI44181.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella sp.
           MR-7]
          Length = 352

 Score =  284 bits (726), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 172/343 (50%), Positives = 233/343 (67%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+D   +RL  ++ + E   +W     A+ L +ER  L+  +  I ++   L D 
Sbjct: 8   LGGIFDYDAKHERLEEVSRELESSEVWNEPERAQALGKERASLEAVVKTIDDMDSGLEDV 67

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+EE+D     ET+  L  ++  +   +F  + SG  D+++ YL++ +G+GGTE
Sbjct: 68  EGLLELAIEEEDEDTFNETTKELDYLESRLAELEFRRMFSGPQDASNCYLDIQSGSGGTE 127

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANM+LRMY RW E   F  E +E+ DG+ AGIK AT+   G  A+GWL+ E GVHR
Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS+ RRHTSF S++VYP +DD I I+I+ +D RID YRASGAGGQHVN T+SA
Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPADLRIDVYRASGAGGQHVNRTESA 247

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT  VVQCQ +RSQHKNK  A   L+AKL+ELE+ K+       E +K++IGWG
Sbjct: 248 VRITHLPTNTVVQCQNDRSQHKNKDSAMKQLKAKLFELEMHKQNAEKQAAEDAKSDIGWG 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL     +KDLRT++E  +   VLDGDLD F++A+L 
Sbjct: 308 SQIRSYVLDD-SRIKDLRTSVETRNTQAVLDGDLDKFIEASLK 349


>gi|20663625|pdb|1GQE|A Chain A, Polypeptide Chain Release Factor 2 (Rf2) From Escherichia
           Coli
          Length = 365

 Score =  284 bits (726), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 182/351 (51%), Positives = 232/351 (66%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ + + L G  D+D   +RL  +N + E P +W     A+ L +ER  L+  +  + + 
Sbjct: 14  LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQX 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   LLELA+E DD     E    L  ++ ++   +F    SGE DS D YL++ 
Sbjct: 74  KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRXFSGEYDSADCYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ L R Y RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+
Sbjct: 134 AGSGGTEAQDWASXLERXYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPTG+V QCQ +RSQHKNK QA    +AKLYE+E QK+       E +
Sbjct: 254 VNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAXKQXKAKLYEVEXQKKNAEKQAXEDN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363


>gi|78047471|ref|YP_363646.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|123585257|sp|Q3BUB7|RF2_XANC5 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|78035901|emb|CAJ23592.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 374

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 182/351 (51%), Positives = 244/351 (69%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ ++  L G+FD+D   +RL  ++ + E P +W +   A+ L RER  L+  +  I ++
Sbjct: 14  LNDRVLSLRGIFDYDAKKERLEEVSRELESPDVWNDAERAQALGRERSMLEKTVIGIADV 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLELA  E D         +L   +  VE  +F+ + SG+ DS +A++++ 
Sbjct: 74  LSGLADAGDLLELAESEQDEDTALAVIADLDNYQAHVEKLEFQRMFSGQMDSANAFVDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA +LLRMY RWAE R +KTE +E+  GE AGIKSAT+ I+G  AYGWLK
Sbjct: 134 AGAGGTEAQDWAEILLRMYLRWAESRGWKTELMEVSGGEVAGIKSATVRIEGEYAYGWLK 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS++RRHTSF+S++V P VDD+IEI+I+ +D R D YR+SGAGGQH
Sbjct: 194 TEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT  VV CQ  RSQH+N+  A  ML AKLYELE+QKR    +  E++
Sbjct: 254 VNKTESAVRITHIPTNTVVACQTGRSQHQNRDNAMKMLAAKLYELEVQKRNAEKDALEAT 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIR+YVL     +KDLRT IE++    VLDGDLD+F++A+L  
Sbjct: 314 KSDIGWGSQIRNYVLD-QSRIKDLRTGIERSDTQKVLDGDLDEFVEASLKA 363


>gi|113867189|ref|YP_725678.1| protein chain release factor B [Ralstonia eutropha H16]
 gi|113525965|emb|CAJ92310.1| protein chain release factor B (RF-2) [Ralstonia eutropha H16]
          Length = 357

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 176/346 (50%), Positives = 248/346 (71%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD+D  V RL  +N   EDP +W N   A+ L +E++ ++  +S + ++ D L 
Sbjct: 11  KIYGGIFDYDVKVGRLDEVNGLLEDPDVWNNPKRAQDLGKEKKAIEGVVSVLSKLTDDLS 70

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
               L ELA EE D   L+    +++  +  V   +F  + SGE D  +A++++ AGAGG
Sbjct: 71  GAEELFELAREEGDDDTLEAIEADVKGFEEIVAGMEFRRMFSGEMDQANAFIDIQAGAGG 130

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DWA+MLLR Y ++ E++ FK E LE  +G+ AGIKSAT+ I+G  A+G+L+ E GV
Sbjct: 131 TEACDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSATIKIEGEYAFGYLRTETGV 190

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS+  RHTSFSS++VYP VDDS E+E++ +D R+DTYRASGAGGQH+N TD
Sbjct: 191 HRLVRKSPFDSSGGRHTSFSSVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTD 250

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG+VVQCQ +RSQH+N+A+A +ML+++LYE E++KR+  A+  E+ KT++G
Sbjct: 251 SAVRITHIPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYEHEMRKRQAEADKLEAGKTDVG 310

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 311 WGHQIRSYVLD-QSRIKDLRTNVEMSNTQKVLDGDLDPFIEASLKQ 355


>gi|253701853|ref|YP_003023042.1| hypothetical protein GM21_3258 [Geobacter sp. M21]
 gi|251776703|gb|ACT19284.1| conserved hypothetical protein [Geobacter sp. M21]
          Length = 371

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 176/352 (50%), Positives = 242/352 (68%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ +++ L G  + D+  +R+  L   T  P  W +   A+ ++R R  ++  ++  + 
Sbjct: 11  ELAERIDKLRGSLEVDDKKERMQELEELTSRPDFWNDAENAQKVLRSRTAMEKDVTIWES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  +  D   L+EL  EE D + L E +    +++  V   +F  +LSG  D++ A++ +
Sbjct: 71  LDKQARDIQELIELGSEEQDEATLAEVAAMNAQLETGVSQAEFRRMLSGPHDASGAFVSI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTESQDWA MLLRMY R+ EK+ +KTE  +  +G+ AG+K  T  + G  AYG+L
Sbjct: 131 NSGAGGTESQDWAEMLLRMYLRYCEKKGWKTEITDYQEGDGAGVKGVTFAVTGEFAYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGG 240
           K E G+HRLVRISP+DS++RRHTSF+S +V+P + +D IEI+I+ESD RIDTYR+SGAGG
Sbjct: 191 KAEAGIHRLVRISPFDSSARRHTSFASAFVFPVIEEDDIEIKIAESDLRIDTYRSSGAGG 250

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVNTTDSA+RITHIPTG VV CQ ERSQH NKA A  +LR+KLYE+EL++RE  A+   
Sbjct: 251 QHVNTTDSAIRITHIPTGTVVACQSERSQHMNKATAMKVLRSKLYEMELREREAKASDIA 310

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             K EIGWG QIRSYVL PY+MVKDLRT +E   P  VLDG LDDF+   L 
Sbjct: 311 GEKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGKPDAVLDGALDDFVVPYLM 362


>gi|319942340|ref|ZP_08016655.1| peptide chain release factor [Sutterella wadsworthensis 3_1_45B]
 gi|319804213|gb|EFW01113.1| peptide chain release factor [Sutterella wadsworthensis 3_1_45B]
          Length = 354

 Score =  284 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 171/344 (49%), Positives = 236/344 (68%), Gaps = 1/344 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
             GG+FD D   +RL  +N + E+P LW +   A+ + +E++ LD+ +     +   + D
Sbjct: 2   NFGGIFDVDRKARRLEEVNREIENPDLWNDPKHAQEVSKEKKMLDDIVGSFNRLTQGIAD 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              L EL+L E+D   L+   +++ RI+ EV   +F+ + +   DS + YLE+ +GAGGT
Sbjct: 62  AGELFELSLAEEDFDSLEVIGEDVDRIEHEVAQLEFKRMFNQPMDSANCYLEIQSGAGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDWA+ML RMY R+AE++ FK    E   GE AGIKS TL I+G  AYG L+ E G+H
Sbjct: 122 EAQDWASMLERMYMRYAERKGFKVTLEEETPGEVAGIKSCTLFIEGEWAYGTLRTETGIH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+D+N+RRHTSF+S++VYP VDDSI+IEI+ +D  ID +RASGAGGQH+  T+S
Sbjct: 182 RLVRKSPFDANARRHTSFTSVYVYPEVDDSIDIEINPADLSIDVFRASGAGGQHIQKTES 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRI H PTG++  CQ +RSQH+N+ +A   L+AKLYELE++KR E     E SK++IGW
Sbjct: 242 AVRIHHKPTGIITICQDDRSQHRNREKAMQQLKAKLYELEMRKRMEAQTKLEESKSDIGW 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G QIRSYVL     VKDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 302 GHQIRSYVLD-QSRVKDLRTGVETGNTGGVLDGDLDQFIEASLK 344


>gi|298500779|ref|ZP_07010582.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Vibrio
           cholerae MAK 757]
 gi|297540560|gb|EFH76618.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Vibrio
           cholerae MAK 757]
          Length = 344

 Score =  284 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 182/342 (53%), Positives = 241/342 (70%), Gaps = 1/342 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++   + D  
Sbjct: 1   GGIFDYDAKKERLEEVNAELEQPDVWTQPERAQALGKERSALEAVVDTIDQLDRGVDDVE 60

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LLELA+E +D     E    L  ++ ++E  +F  + SG+ DS+D YL++ AG+GGTE+
Sbjct: 61  GLLELAIEAEDQETFDEIGPELDELEAKLEQLEFRRMFSGDHDSSDCYLDLQAGSGGTEA 120

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G  AYGWL+ E GVHRL
Sbjct: 121 QDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWLRTETGVHRL 180

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS  RRHTSF+S ++YP VD++I+IEI+ +D RID YRASGAGGQHVNTT+SAV
Sbjct: 181 VRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQHVNTTESAV 240

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+       E +K++IGWG 
Sbjct: 241 RITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGS 300

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYVL     +KDLRT IE  +   VLDGDLD F++A+L 
Sbjct: 301 QIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDKFIEASLK 341


>gi|282908140|ref|ZP_06315971.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus subsp. aureus WW2703/97]
 gi|282910399|ref|ZP_06318203.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus subsp. aureus WBG10049]
 gi|282325791|gb|EFB56099.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus subsp. aureus WBG10049]
 gi|282327805|gb|EFB58087.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus subsp. aureus WW2703/97]
          Length = 352

 Score =  284 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 166/346 (47%), Positives = 224/346 (64%), Gaps = 1/346 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGGLFD +N    +        +P+ W N  +A+ ++ +   L   ++  K +Q  + D
Sbjct: 2   KLGGLFDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDD 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
                +L  EE D  + ++    +   K +V+  + + LL G  D+N+A LE+H GAGGT
Sbjct: 62  MDATWDLLQEEFDGEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ESQDWANML RMY R+ EK+ FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVH
Sbjct: 122 ESQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           RLVRISP+DS+ RRHTSF+S  V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+
Sbjct: 182 RLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTE 241

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SA+RITH P+G+VV  Q ERSQ KN+  A  ML++KLY+L+L+++          + EIG
Sbjct: 242 SAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIG 301

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSYV  PY MVKD RTN E      V+DGD+  F+++ L  
Sbjct: 302 WGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLRQ 347


>gi|308198348|ref|YP_003933612.1| peptide chain release factor I [Pseudomonas aeruginosa PAO1]
 gi|307752087|gb|ADN93061.1| peptide chain release factor I [Pseudomonas aeruginosa PAO1]
          Length = 364

 Score =  284 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 187/351 (53%), Positives = 250/351 (71%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   + G  D+D    RL  +N + EDP++W N   A+ L RER  L   +  + ++
Sbjct: 13  LSERTQTIRGYLDYDQKHDRLVEVNRELEDPNVWNNPEYAQNLGRERAQLAQVVETLDDL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D+  LL++A+EEDD   + + ++ ++R++  +E  +F  + SGE D N+AYL++ 
Sbjct: 73  TSGLADSRDLLDMAVEEDDEGAVDDVANEVERLREILEKLEFRRMFSGEMDPNNAYLDIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWANMLLRMY RWA+K  F    +E+ +GE AGIK AT+ IKG  A+GWL+
Sbjct: 133 AGSGGTEAQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSF++++V P +DD+IEIEI+ +D RIDTYR+SGAGGQH
Sbjct: 193 TEIGVHRLVRKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPADLRIDTYRSSGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QKR   +   E S
Sbjct: 253 VNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRTAASQALEDS 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT IE++    VLDGDLD++++A+L  
Sbjct: 313 KSDIGWGHQIRSYVLD-QSRIKDLRTGIERSDCDKVLDGDLDEYLEASLKQ 362


>gi|91775149|ref|YP_544905.1| peptide chain release factor 2 [Methylobacillus flagellatus KT]
 gi|91709136|gb|ABE49064.1| bacterial peptide chain release factor 2 (bRF-2) [Methylobacillus
           flagellatus KT]
          Length = 354

 Score =  284 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 180/351 (51%), Positives = 245/351 (69%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L       GG+FD+D   QRL  ++   EDP++W +   ++ L +ER+ L+  ++ + E+
Sbjct: 3   LRSATRPYGGIFDFDTKQQRLEEVSQLLEDPNIWNDNERSQKLGKERRELEFVVNSLTEV 62

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ + D+  L E+A EE+D   L+    + Q ++  V   +F  + S   D N+ +L++ 
Sbjct: 63  ENGVRDSRELFEMAREENDDDTLRSIDADTQALEKIVAEMEFRRMFSHPMDQNNCFLDIQ 122

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+MLLRMY R+ E + FK E LE  +G+ AGIKSA+L I G  AYG+L+
Sbjct: 123 AGSGGTEAQDWASMLLRMYLRYCENKGFKVEVLEESEGDVAGIKSASLKISGDYAYGFLR 182

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSF+S++VYP VDDSI +EI+ +D RIDTYRASGAGGQH
Sbjct: 183 TESGVHRLVRKSPFDSGNRRHTSFASVFVYPEVDDSIVVEINPADLRIDTYRASGAGGQH 242

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH+PT  VVQCQ +RSQH+NK +A NML+A+LY LEL+KR E     E +
Sbjct: 243 INKTDSAVRITHLPTNTVVQCQNDRSQHRNKDEAMNMLKAQLYALELRKRNEEKQAMEDA 302

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KT+IGWG QIRSYVL     +KDLRTN+E  +   VLDGDLD F+  +L  
Sbjct: 303 KTDIGWGHQIRSYVLD-QSRIKDLRTNVEVGNTQGVLDGDLDPFISESLKQ 352


>gi|152985089|ref|YP_001346821.1| peptide chain release factor 2 [Pseudomonas aeruginosa PA7]
 gi|150960247|gb|ABR82272.1| peptide chain release factor 2 [Pseudomonas aeruginosa PA7]
          Length = 382

 Score =  284 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 183/344 (53%), Positives = 246/344 (71%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D    RL  +N + EDP++W N   A+ L RER  L   +  + ++   L D+
Sbjct: 38  FGGIFDYDQKHDRLVEVNRELEDPNVWNNPEYAQNLGRERAQLAQVVETLDDLTSGLADS 97

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LL++A+EE D   + + +  ++R++  +E  +F  + SGE D N+AYL++ AG+GGTE
Sbjct: 98  RDLLDMAVEEGDEGAVGDVAGEVERLREILEKLEFRRMFSGEMDPNNAYLDIQAGSGGTE 157

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANMLLRMY RWA+K  F    +E+ +GE AGIK AT+ +KG  A+GWL+ E GVHR
Sbjct: 158 AQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIKGATVHVKGEYAFGWLRTEIGVHR 217

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS +RRHTSF++++V P +DD+IEIEI+ +D RIDTYR+SGAGGQHVNTTDSA
Sbjct: 218 LVRKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPADLRIDTYRSSGAGGQHVNTTDSA 277

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT  VV CQ ERSQH NK  A  MLRAKLYE E+QKR   +   E +K++IGWG
Sbjct: 278 VRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYEQEMQKRTAASQALEDTKSDIGWG 337

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSYVL     +KDLRT IE++    VLDGDLD++++A+L  
Sbjct: 338 HQIRSYVLD-QSRIKDLRTGIERSDCDKVLDGDLDEYLEASLKQ 380


>gi|190149600|ref|YP_001968125.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307245141|ref|ZP_07527233.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307249543|ref|ZP_07531530.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307255961|ref|ZP_07537758.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307258552|ref|ZP_07540288.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|307260795|ref|ZP_07542482.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|307262921|ref|ZP_07544544.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|189914731|gb|ACE60983.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|306853921|gb|EFM86134.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306858398|gb|EFM90467.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306861075|gb|EFM93072.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306867346|gb|EFM99198.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306869521|gb|EFN01311.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306871739|gb|EFN03460.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 347

 Score =  284 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 174/344 (50%), Positives = 240/344 (69%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D  V+RL  +N + E P +W    +A+ L +ER  L+  ++ I+ +   + D 
Sbjct: 3   FGGIFDFDAKVERLEEVNAELEQPEIWNTPEKAQALGKERSALEMVVNTIRTLDQGVEDV 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L+ELA+E +D     E       ++ ++   +F+ + SG+ D+ D Y+++ AG+GGTE
Sbjct: 63  EGLIELAVEAEDEDTFNEAQAEANELEEKLAKLEFQRMFSGQHDAADCYVDLQAGSGGTE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G  A+GWL+ E G+HR
Sbjct: 123 AQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITGEYAFGWLRTETGIHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SA
Sbjct: 183 LVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESA 242

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIP+G+VVQCQ  RSQH+NK Q    L+AKLYE+E+ K+       E SK++IGWG
Sbjct: 243 VRITHIPSGIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNAEKQAMEESKSDIGWG 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 303 SQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKFIEASLKA 345


>gi|239816762|ref|YP_002945672.1| hypothetical protein Vapar_3791 [Variovorax paradoxus S110]
 gi|259585247|sp|C5CUX0|RF2_VARPS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|239803339|gb|ACS20406.1| conserved hypothetical protein [Variovorax paradoxus S110]
          Length = 367

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 170/351 (48%), Positives = 244/351 (69%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L    D+D   +RL  +N   EDP++W +  +A+ L RE++ LD+ +  +  +
Sbjct: 16  LSARTADLRRYLDYDAKAERLRTVNASLEDPNVWNDPKKAQELGREKKSLDDVVVTLDRL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN  L E++ E+ D   LQ  +D+   ++ +++  +F  + +  AD  +A++++ 
Sbjct: 76  TSGLSDNTELYEMSKEDGDMDGLQSIADDAAALETDIKQLEFRRMFNNPADPLNAFVDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y ++AE++ FKT+  +   G+ AGIK AT+ ++G  A+G L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLKYAERKGFKTQIEDETPGDTAGIKGATIKVEGDYAFGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+  RHTSF+SI+VYP +DDSIEIEI+ +D R DT+RASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASIFVYPEIDDSIEIEINPADVRTDTFRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+ E++KR+E     E S
Sbjct: 256 INKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDHEMRKRQEEQQKLEDS 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 316 KTDVGWGHQIRSYVLD-NSRIKDLRTNVEVSATQKVLDGDLDVFIEASLKQ 365


>gi|209519985|ref|ZP_03268764.1| peptide chain release factor 2 [Burkholderia sp. H160]
 gi|209499582|gb|EDZ99658.1| peptide chain release factor 2 [Burkholderia sp. H160]
          Length = 384

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 177/346 (51%), Positives = 247/346 (71%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD+D+   RL  +N + EDP +W +   A+ L +E++ LD+ +  +  I + + 
Sbjct: 38  TTYGGIFDYDDKALRLIEVNRELEDPDVWNDAKHAQALGKEKKLLDDTVGKLTSITNDVN 97

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   L E+A EE D   L     + Q I+  V   +F  + +  AD N+A+L++ AGAGG
Sbjct: 98  DAQDLFEMAREEADDETLLACEADAQAIEARVADMEFRRMFANPADPNNAFLDIQAGAGG 157

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DWA+MLLR Y R+ E++ FKTE LE  +G+ AGIK+AT+ I+G  AYG+L+ E GV
Sbjct: 158 TEACDWASMLLRQYLRYCERKGFKTEVLEQTEGDVAGIKNATIKIEGEYAYGFLRTETGV 217

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH+N TD
Sbjct: 218 HRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTD 277

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+P+G+VVQCQ +RSQH+N+A+A  ML+++LYE E++KR+   +  E+ KT++G
Sbjct: 278 SAVRITHMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAGKTDVG 337

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSYVL     +KDLRTN+E ++   VLDGDLD F+ A+L  
Sbjct: 338 WGHQIRSYVLD-NSRIKDLRTNVEISNTKSVLDGDLDPFISASLKQ 382


>gi|296136248|ref|YP_003643490.1| hypothetical protein Tint_1790 [Thiomonas intermedia K12]
 gi|295796370|gb|ADG31160.1| conserved hypothetical protein [Thiomonas intermedia K12]
          Length = 367

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 171/350 (48%), Positives = 246/350 (70%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L +++  L G  D+D    RL  +    EDP +W +   A+ L RER+ L+  +  ++ +
Sbjct: 16  LQQRVQALRGYLDFDAKASRLMEVAGALEDPQVWNDPKRAQELGRERKSLETVVLGLESL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D+  L E++ EE D +  +    ++++   EVE  +F  + S   D ++ ++++ 
Sbjct: 76  TTALADHSELFEMSREEGDDATCEAIEADVEKSAAEVEALEFRRMFSNPLDPSNCFIDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y R+ E++ FKTE +E  +G+ AGI+SAT+ ++G  AYG L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKTEVMEETEGDVAGIRSATIKVEGDYAYGQLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+  RHTSF+S++VYP VDDSIEI+I+ +D R DT+RASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDDSIEIDINPADVRTDTFRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVR+TH+PTG+VVQCQ +RSQHKN+A+AW MLR++LYE E++KR       ES+
Sbjct: 256 INKTDSAVRLTHMPTGIVVQCQNDRSQHKNRAEAWQMLRSRLYEHEMRKRMAEQQTLEST 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K+++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD+F+ A+L 
Sbjct: 316 KSDVGWGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDEFITASLK 364


>gi|297580789|ref|ZP_06942715.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Vibrio
           cholerae RC385]
 gi|297535205|gb|EFH74040.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Vibrio
           cholerae RC385]
          Length = 344

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 182/342 (53%), Positives = 242/342 (70%), Gaps = 1/342 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D   +RL  +N + E P +W     A+ L +ER  L+  +  I ++   + D  
Sbjct: 1   GGIFDYDAKKERLEEVNAELEQPDVWTQPERAQALGKERSALEAVVDTIDQLDRGVDDVE 60

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LLELA+E +D     E    L  +++++E  +F  + SG+ DS+D YL++ AG+GGTE+
Sbjct: 61  GLLELAIEAEDQETFDEIGPELDELEVKLEQLEFRRMFSGDHDSSDCYLDLQAGSGGTEA 120

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G  AYGWL+ E GVHRL
Sbjct: 121 QDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWLRTETGVHRL 180

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS  RRHTSF+S ++YP VD++I+IEI+ +D RID YRASGAGGQHVNTT+SAV
Sbjct: 181 VRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQHVNTTESAV 240

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+       E +K++IGWG 
Sbjct: 241 RITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGS 300

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYVL     +KDLRT IE  +   VLDGDLD F++A+L 
Sbjct: 301 QIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDKFIEASLK 341


>gi|303252568|ref|ZP_07338731.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307247319|ref|ZP_07529367.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|302648536|gb|EFL78729.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|306856163|gb|EFM88318.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
          Length = 347

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 173/344 (50%), Positives = 239/344 (69%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D  V+RL  +N + E P +W    +A+ L +ER  L+  ++ I+ +   + D 
Sbjct: 3   FGGIFDFDAKVERLEEVNAELEQPEIWNTPEKAQALGKERSALEMVVNTIRTLDQGVEDV 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L+ELA+E +D     E       ++ ++   +F+ + SG+ D+ D Y+++ AG+GGTE
Sbjct: 63  EGLIELAVEAEDEDTFNEAQAEANELEEKLAKLEFQRMFSGQHDAADCYVDLQAGSGGTE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G  A+GWL+ E G+HR
Sbjct: 123 AQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITGEYAFGWLRTETGIHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SA
Sbjct: 183 LVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESA 242

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIP+ +VVQCQ  RSQH+NK Q    L+AKLYE+E+ K+       E SK++IGWG
Sbjct: 243 VRITHIPSDIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNAEKQAMEESKSDIGWG 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 303 SQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKFIEASLKA 345


>gi|167646537|ref|YP_001684200.1| peptide chain release factor 2 [Caulobacter sp. K31]
 gi|189039999|sp|B0SXB7|RF2_CAUSK RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|167348967|gb|ABZ71702.1| peptide chain release factor 2 [Caulobacter sp. K31]
          Length = 367

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 205/347 (59%), Positives = 256/347 (73%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           +C GG+FDWD A+++L  LN + EDP LW    EA+ + R+R  L   +  ++E++  L 
Sbjct: 14  DCSGGVFDWDAALRKLDELNARVEDPTLWDRPSEAQAVSRDRASLAARVGAVQELEGGLK 73

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D L   ELA  E D ++L++    L+ +K      + E+LLSGEAD ND Y+E+++GAGG
Sbjct: 74  DALEYAELADMEGDEALLEDARAQLKDLKDRAGRAELEALLSGEADGNDCYVEINSGAGG 133

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TES DWA MLLRMY+RWA   K   E +E   G++ GIKSATLL+KG NAYGWLK E GV
Sbjct: 134 TESCDWAGMLLRMYSRWANAHKMSVELVEETAGDQVGIKSATLLVKGANAYGWLKTEAGV 193

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVRISPYD+ ++RHTSF+S WVYPVVDD+IEI+I+ SD R DTYRASGAGGQH+N TD
Sbjct: 194 HRLVRISPYDAAAKRHTSFASAWVYPVVDDTIEIDINPSDVRTDTYRASGAGGQHINKTD 253

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+ V CQ  RSQH+N+ +AW MLRA+LYE ELQ+RE      E  KT+IG
Sbjct: 254 SAVRLTHIPTGIAVACQAGRSQHQNREEAWKMLRARLYEAELQRREAAQQALEDQKTDIG 313

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYVLQPYQMVKDLRTN+E +    VLDGDLD FM A+LA +
Sbjct: 314 WGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDAFMGASLAQR 360


>gi|71153099|sp|Q7VNG1|RF2_HAEDU RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 365

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 174/351 (49%), Positives = 239/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +   + G  D+D  V+RL  +N + E P +W    +A+ L +ER  L+  ++ I  +
Sbjct: 14  LTERTQLIRGYLDFDTKVERLEEVNAELEQPEIWNTPEKAQTLGKERSTLEMVVNTINAL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + D   L+ELA+E +D   L E       +  ++   +F+ + SG  D+ D YL++ 
Sbjct: 74  IQGIEDVEALIELAVEAEDEQTLYEAQIEADELATKLAKLEFQRMFSGPYDATDCYLDLQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G  A+GWL+
Sbjct: 134 AGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATIRITGEYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DSN+RRHTSF++ +VYP VDD ++IEI+ +D RID YRASGAGGQH
Sbjct: 194 TETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEVDDDVDIEINPADLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+P+G+VVQCQ  RSQH+NK Q    LRAKLYE+E+ K+       E +
Sbjct: 254 VNKTESAVRITHMPSGIVVQCQNGRSQHQNKDQCMKQLRAKLYEMEMMKKNAEKQAMEEN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 363


>gi|319787302|ref|YP_004146777.1| hypothetical protein Psesu_1704 [Pseudoxanthomonas suwonensis 11-1]
 gi|317465814|gb|ADV27546.1| hypothetical protein Psesu_1704 [Pseudoxanthomonas suwonensis 11-1]
          Length = 375

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 177/351 (50%), Positives = 244/351 (69%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ ++  L G  D+D   +RL  +N + E P++W +   A+ L RER  L+  +  I  +
Sbjct: 14  LTGRVVSLRGYLDYDAKKERLEEVNRELELPNVWDDPERAQALGRERALLEKTVGGIASV 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L  +  LLELA  E D    +    ++ R +  +E  +F+ + SG+ D  +A++++ 
Sbjct: 74  LEGLEGSTELLELAESEQDEETAEAVVADVDRFEKHIEALEFQRMFSGQMDGANAFVDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA MLLRMY RW E R +KTE LE+  G+ AGIKSAT  ++G  AYGWLK
Sbjct: 134 AGAGGTEAQDWAEMLLRMYLRWCESRGWKTELLEVSGGDVAGIKSATFRVEGDFAYGWLK 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS++RRHTSF+S++V P VDD I+IEI+ +D + D YR+SGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDKIDIEINPADLKTDVYRSSGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+P+G+VV CQ ERSQH N+ +A  ML AKLYELE+QKR    +  E++
Sbjct: 254 VNKTESAVRITHVPSGIVVACQTERSQHANRDRAMKMLAAKLYELEIQKRNAEKDAVEAT 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIR+YVL     +KDLRT IE++    VLDGDLD+F++A+L  
Sbjct: 314 KSDIGWGSQIRNYVLD-QSRIKDLRTGIERSDTQKVLDGDLDEFVEASLKA 363


>gi|300860397|ref|ZP_07106484.1| peptide chain release factor 2, programmed frameshift [Enterococcus
           faecalis TUSoD Ef11]
 gi|300849436|gb|EFK77186.1| peptide chain release factor 2, programmed frameshift [Enterococcus
           faecalis TUSoD Ef11]
          Length = 366

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 171/353 (48%), Positives = 229/353 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++++++         D   + ++    +  +P  W N   A+ L+ E   L        +
Sbjct: 12  EMTQKITSFRRSLCLDQLEEDIAEAENRMGEPGFWDNTETAQKLINETNSLKEKYQQFHQ 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + + L +  ++ EL  EE D  I +E  + +  ++  +   +   LL+   D N+A +E+
Sbjct: 72  LSEELDELTVMFELQQEEYDAEIQEELEERIHLLQERLTTYELSLLLNEPYDHNNALIEL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMYTRWAE   F+ E L+   G+EAGIKS TLLIKG NAYG+L
Sbjct: 132 HPGAGGTESQDWGSMLLRMYTRWAESHGFQVETLDYQAGDEAGIKSVTLLIKGYNAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS  RRHTSF S+ V P +DD+IEI I+  D +IDTYRASGAGGQ
Sbjct: 192 KSEKGVHRLVRISPFDSAKRRHTSFCSVDVMPELDDTIEIAINPDDLKIDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N T+SAVRITHIPTG VV  Q +RSQ KN+ QA +ML+AKLY+LE++K+ + A     
Sbjct: 252 HINKTESAVRITHIPTGTVVASQAQRSQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EIGWG QIRSYV  PY MVKD RTN E  +   V+DGDLD F+ A L  +
Sbjct: 312 EQMEIGWGSQIRSYVFHPYSMVKDHRTNYETGNVQAVMDGDLDGFIDAYLKQR 364


>gi|332284056|ref|YP_004415967.1| peptide chain release factor 2 [Pusillimonas sp. T7-7]
 gi|330428009|gb|AEC19343.1| peptide chain release factor 2 [Pusillimonas sp. T7-7]
          Length = 359

 Score =  283 bits (723), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 174/344 (50%), Positives = 244/344 (70%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D   +RL  +N + E P +W +   A+ L RE++ L+  +  + +I + L D 
Sbjct: 15  FGGIFDYDAKAERLHVVNAELESPDVWNDPKHAQDLGREKKSLETVVHTLADIANGLTDA 74

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L +LA E+DD + L     +   I   +E  +F  + S  AD  + ++++ AGAGGTE
Sbjct: 75  QELFDLAAEDDDDATLAAVEADTNAIGARLEELEFRRMFSNPADPLNCFMDIQAGAGGTE 134

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA++LLR Y R+ E + FKTE LE  DG+ AGIKSAT+ I+G  A+G L+ E GVHR
Sbjct: 135 AQDWASILLRQYLRYCEHKDFKTEVLEESDGDVAGIKSATIKIEGEYAFGLLRTETGVHR 194

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS + RHTSF+S++VYP VD+S+EI+I+ +D R+DTYRASGAGGQH+N TDSA
Sbjct: 195 LVRKSPFDSANGRHTSFASVFVYPEVDESVEIDINPADLRVDTYRASGAGGQHINKTDSA 254

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VVQCQ +RSQH+N+A+A +ML+++LYELE++ R       E SKT++GWG
Sbjct: 255 VRITHMPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYELEMRNRMAEQQKMEDSKTDVGWG 314

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 315 HQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQ 357


>gi|258421538|ref|ZP_05684463.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus A9719]
 gi|258423403|ref|ZP_05686294.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus A9635]
 gi|257842464|gb|EEV66888.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus A9719]
 gi|257846464|gb|EEV70487.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
           aureus A9635]
          Length = 352

 Score =  283 bits (723), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 166/346 (47%), Positives = 224/346 (64%), Gaps = 1/346 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGGLFD +N    +        +P+ W N  +A+ ++ +   L   ++  K +Q  + D
Sbjct: 2   KLGGLFDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDD 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
                +L  EE D  + ++    +   K +V+  + + LL G  D+N+A LE+H GAGGT
Sbjct: 62  MDATWDLLQEEFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ESQDWANML RMY R+ EK+ FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVH
Sbjct: 122 ESQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           RLVRISP+DS+ RRHTSF+S  V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+
Sbjct: 182 RLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTE 241

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SA+RITH P+G+VV  Q ERSQ KN+  A  ML++KLY+L+L+++          + EIG
Sbjct: 242 SAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIG 301

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSYV  PY MVKD RTN E      V+DGD+  F+++ L  
Sbjct: 302 WGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLRQ 347


>gi|83955487|ref|ZP_00964118.1| peptide chain release factor 2 [Sulfitobacter sp. NAS-14.1]
 gi|83840131|gb|EAP79306.1| peptide chain release factor 2 [Sulfitobacter sp. NAS-14.1]
          Length = 374

 Score =  283 bits (723), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 200/352 (56%), Positives = 251/352 (71%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+S+ L  L    D + A  RL   N + EDP+LW +   A+ LMR+RQ L ++I+  + 
Sbjct: 11  KISKSLELLAQRLDVETAPYRLEEFNARVEDPNLWDDPDAAQKLMRDRQALVDSIATYEG 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L DN+ L+EL   E D  ++ E    L+++      K+ E+LL+GEAD ND +LE+
Sbjct: 71  IKQELADNIELIELGEMEGDDEVIAEAETALKKLAETAAQKELEALLNGEADGNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWAN+L RMY RWAEK+ +K E      GEEAGIKSAT  I GPNAYGWL
Sbjct: 131 NAGAGGTESCDWANILSRMYVRWAEKKGYKVELQSESPGEEAGIKSATYKISGPNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSF+SIWVYPVVDD+IEI+I+ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSIWVYPVVDDNIEIDINPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL +R    N    
Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRTN E +    VLDGDLD  M A LA+
Sbjct: 310 NKGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGLMGAALAL 361


>gi|71281667|ref|YP_270738.1| peptide chain release factor 2, programmed frameshift [Colwellia
           psychrerythraea 34H]
 gi|123631202|sp|Q47WT4|RF2_COLP3 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|71147407|gb|AAZ27880.1| peptide chain release factor 2, programmed frameshift [Colwellia
           psychrerythraea 34H]
          Length = 365

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 172/351 (49%), Positives = 238/351 (67%), Gaps = 1/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++  + N L G  D+D   +RL  ++ + E P +W     A+ L +ER  L+  ++ I E
Sbjct: 13  EIRERANLLRGYLDYDVKAERLVEVSRELELPDVWNEPERAQALGKERSSLEEVVNTIVE 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++    D   L+ELA+EE D     +       +   +E  +F  + SGE D+N++YL++
Sbjct: 73  LETGCEDIEGLVELAVEESDQETFDDAEVEADALDKVLEKLEFRRMFSGEQDANNSYLDI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GGTE+QDWA ML+RMY RW E   +KTE +E+ DG+ AGIK  T+   G  AYGWL
Sbjct: 133 QSGSGGTEAQDWAEMLMRMYLRWGEAHGYKTEVIEVTDGDVAGIKGCTIKYTGEYAYGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+IEI+I+ +D RIDT+RASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNIEIDINPADLRIDTFRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSA+RITH PTG VV CQ +RSQHKN+A A  +L+AKLYE+E+QK+     + E 
Sbjct: 253 HVNKTDSAIRITHEPTGAVVACQADRSQHKNRATAMKLLKAKLYEMEMQKQNSDKQVLED 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 313 GKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKFLEASLK 362


>gi|83942252|ref|ZP_00954713.1| peptide chain release factor 2 [Sulfitobacter sp. EE-36]
 gi|83846345|gb|EAP84221.1| peptide chain release factor 2 [Sulfitobacter sp. EE-36]
          Length = 374

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 200/352 (56%), Positives = 251/352 (71%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+S+ L  L    D + A  RL   N + EDP+LW +   A+ LMR+RQ L ++I+  + 
Sbjct: 11  KISKSLELLAQRLDVETAPYRLEEFNARVEDPNLWDDPDAAQKLMRDRQALVDSIATYEG 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L DN+ L+EL   E D  ++ E    L+++      K+ E+LL+GEAD ND +LE+
Sbjct: 71  IKQELADNIELIELGEMEGDDEVIAEAETALKKLAETAAQKELEALLNGEADGNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWAN+L RMY RWAEK+ +K E      GEEAGIKSAT  I GPNAYGWL
Sbjct: 131 NAGAGGTESCDWANILSRMYVRWAEKKGYKVELQSESPGEEAGIKSATYKISGPNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSF+SIWVYPVVDD+IEI+I+ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSIWVYPVVDDNIEIDINPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL +R    N    
Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRTN E +    VLDGDLD  M A LA+
Sbjct: 310 NKGDAGWGNQIRSYVLQPYQMVKDLRTNYETSDTKGVLDGDLDGLMGAALAL 361


>gi|227824555|ref|ZP_03989387.1| peptide chain release factor [Acidaminococcus sp. D21]
 gi|226905054|gb|EEH90972.1| peptide chain release factor [Acidaminococcus sp. D21]
          Length = 382

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 164/354 (46%), Positives = 233/354 (65%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +L  L      +   +R+  L+ +   P  W +  +A+ + +E  +L + +     
Sbjct: 28  ELRNRLGELKTGLKIEPKKERIQDLDYQMAAPGFWDDPDKAQKVAQEANNLKSEVDTFTS 87

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ ++ D   L E+A+EE D +++ E    L+  K  +   +   LLS E D+N+A + +
Sbjct: 88  LETKVDDLDTLWEMAMEEKDDTLVSEMESELEGAKHTLSELELGMLLSDEYDANNAIMNL 147

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTE+QDW  MLLRM+TR+AE + F+ E L++  GEEAG KSATL IKG NAYG+L
Sbjct: 148 HAGAGGTEAQDWTGMLLRMFTRYAEGKGFEVELLDVLPGEEAGTKSATLAIKGHNAYGFL 207

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DSN+RRHTSF+++ V P +D+++E+ I+  D R+D YRASGAGGQ
Sbjct: 208 KSEKGVHRLVRISPFDSNARRHTSFAAVDVMPEIDNTVEVNINMDDVRVDYYRASGAGGQ 267

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T SAVR+TH+PTG+VVQCQ ERSQ +NK +   +LRAKL+E E   +++  +    
Sbjct: 268 HVNKTSSAVRMTHLPTGIVVQCQNERSQLQNKERCLQLLRAKLFEYEKAIQDQKISDLAG 327

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               I WG QIRSYV QPY +VKD RT  E  +   V+DGDLD F+++ L   K
Sbjct: 328 DYQAIEWGSQIRSYVFQPYTLVKDHRTGAETGNIQAVMDGDLDLFVESYLRSLK 381


>gi|117921735|ref|YP_870927.1| peptide chain release factor 2 [Shewanella sp. ANA-3]
 gi|117614067|gb|ABK49521.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella sp.
           ANA-3]
          Length = 352

 Score =  282 bits (722), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 173/343 (50%), Positives = 234/343 (68%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+D   +RL  ++ + E   +W     A+ L +ER  L+  +  I ++   L D 
Sbjct: 8   LGGIFDYDAKHERLEEVSRELESSEVWNEPERAQALGKERASLEAVVKTIDDMDAGLEDV 67

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLELA+EE+D     ET+  L  ++  +   +F  + SG+ D++D YL++ +G+GGTE
Sbjct: 68  EGLLELAIEEEDEDTFNETTKELDYLESRLAELEFRRMFSGQHDASDCYLDIQSGSGGTE 127

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANM+LRMY RW E   F  E +E+ DG+ AGIK AT+   G  A+GWL+ E GVHR
Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS+ RRHTSF S++VYP +DD I I+I+ +D RID YRASGAGGQHVN T+SA
Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPADLRIDVYRASGAGGQHVNRTESA 247

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT  VVQCQ +RSQHKNK  A   L+AKL+ELE+ K+       E +K++IGWG
Sbjct: 248 VRITHLPTNTVVQCQNDRSQHKNKDSAMKQLKAKLFELEMHKQNAEKQAAEDAKSDIGWG 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL     +KDLRT++E  +   VLDGDLD F++A+L 
Sbjct: 308 SQIRSYVLDD-SRIKDLRTSVETRNTQAVLDGDLDKFIEASLK 349


>gi|319783261|ref|YP_004142737.1| hypothetical protein Mesci_3567 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317169149|gb|ADV12687.1| hypothetical protein Mesci_3567 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 376

 Score =  282 bits (722), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 233/353 (66%), Positives = 290/353 (82%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + +  L   FDWD A++RL +LN + ED  LW   +EA+ LMRERQ L+  I+ +K 
Sbjct: 11  EIRQAITLLRRHFDWDQAIKRLEYLNVRAEDASLWNEPLEAQKLMRERQSLEEGIASVKG 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L DN+ L+EL  EE D  ++ E    ++ ++ E + +Q E+LLSGEADSND YLE+
Sbjct: 71  LTQALEDNIGLIELGEEERDEGVIAEAEAAIRSMQGEAKARQVETLLSGEADSNDTYLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA+MLLRMYTRWAE+R+FK E LE+HDGEEAGIKSATL+IKG NAYGW+
Sbjct: 131 HAGAGGTESQDWASMLLRMYTRWAERRRFKVEVLEMHDGEEAGIKSATLMIKGHNAYGWM 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDSN+RRHTSF+S+WVYPV+DD+IEI++SESD RIDTYR+SG+GGQ
Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFASVWVYPVIDDTIEIDVSESDVRIDTYRSSGSGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+ TG+ V CQ ERSQHKNKA+AW MLR++LYE EL+KRE +AN  E+
Sbjct: 251 HVNTTDSAVRITHLATGIAVACQAERSQHKNKAKAWEMLRSRLYEEELKKREAVANATEA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           SK++IGWG QIRSYVLQPYQ+VKDLRT +E TSPS VLDGDLDDFM+A+L+ +
Sbjct: 311 SKSDIGWGHQIRSYVLQPYQLVKDLRTGVESTSPSSVLDGDLDDFMEASLSQR 363


>gi|300022372|ref|YP_003754983.1| hypothetical protein Hden_0845 [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299524193|gb|ADJ22662.1| conserved hypothetical protein [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 377

 Score =  282 bits (722), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 191/352 (54%), Positives = 257/352 (73%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +   +  L    DW+ A  RL+ LN K EDP+LW +   A+ +MR+RQ L+ ++   K +
Sbjct: 12  IKEAIALLRRSLDWETAEDRLASLNAKAEDPNLWSDAKNAQKVMRQRQTLERSVEDFKRL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           Q    D L L+EL   E D + + E    L+R+ LE   +  E++LSGEAD    Y+EVH
Sbjct: 72  QRDYDDALTLIELGEAESDEASVSEGEAALKRVDLEAHRRSVEAMLSGEADGMSTYVEVH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTESQDWA+ML RMY RW E+R +K + ++   GEEAGIKSAT  I G NA+GWLK
Sbjct: 132 AGAGGTESQDWASMLARMYARWGERRGYKVKLIDESPGEEAGIKSATFEIDGDNAFGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DSN+RRHTSF+S+ VYPV+DD+IE++I+ +D  I   R+SGAGGQH
Sbjct: 192 TEAGVHRLVRISPFDSNARRHTSFASVTVYPVIDDTIEVDINPADVDISFARSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVR+ H P+G+V+  Q++RSQH+NK  A+  L+A+LYE+EL+KRE  AN  +++
Sbjct: 252 VNRTESAVRLVHKPSGIVIFAQEQRSQHQNKDIAFRRLKARLYEMELKKREAKANAEQAA 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KT+IGWG QIRSYVLQPYQ+VKDLRT  + T+PS+VLDGD+D F++A L+ +
Sbjct: 312 KTDIGWGHQIRSYVLQPYQLVKDLRTGAQSTNPSEVLDGDIDPFIEAALSQR 363


>gi|114331309|ref|YP_747531.1| peptide chain release factor 2 [Nitrosomonas eutropha C91]
 gi|114308323|gb|ABI59566.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrosomonas
           eutropha C91]
          Length = 348

 Score =  282 bits (722), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 178/347 (51%), Positives = 242/347 (69%), Gaps = 1/347 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GG+FD+D    RL+ L  ++EDP +W +   A+ L RE++ L+N +  ++ I  +L
Sbjct: 1   MKFYGGIFDFDAKQVRLTELERQSEDPAIWNDPARAQELGREKKSLENIVFTLRSIDRQL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LL++A EE D   L   S+++  +   VE  +F  + S   D N+ ++++ +G+G
Sbjct: 61  QDAQELLQIAQEESDDETLHSISEDVAGLAKTVEEMEFHRMFSDPMDPNNCFIDIQSGSG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWA+ML RMY  + E+R    E LE   G+ AGIKSAT+ + G  AYG+L+ E G
Sbjct: 121 GTEAQDWASMLERMYLHYCERRGLAVELLEESPGDVAGIKSATIKVSGEYAYGYLRTETG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR SP+DS +RRHTSF+S++VYP VDDSIEI+I+ +D R+DTYRASGAGGQH+N T
Sbjct: 181 VHRLVRKSPFDSGNRRHTSFASVFVYPEVDDSIEIDINPADLRVDTYRASGAGGQHINKT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPTG+VVQCQ  RSQH+N+A A  +L+++LYE EL+KR E     E SKT+I
Sbjct: 241 DSAVRITHIPTGIVVQCQSGRSQHRNRADAMTVLKSRLYEAELRKRNETKQAIEDSKTDI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            WG QIRSYVL     +KDLRTNIE  +   VLDGDLD F++A+L  
Sbjct: 301 AWGHQIRSYVLD-QSRIKDLRTNIEVGNTQAVLDGDLDVFIEASLKQ 346


>gi|322420980|ref|YP_004200203.1| peptide chain release factor 2 [Geobacter sp. M18]
 gi|320127367|gb|ADW14927.1| Peptide chain release factor 2 [Geobacter sp. M18]
          Length = 371

 Score =  282 bits (722), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 174/351 (49%), Positives = 245/351 (69%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +++ L GLFD D+  +R+  L+  T  P  W +   A+ +++ R  ++  ++  + +
Sbjct: 12  LVERIDKLRGLFDVDDKKERMQELDELTNRPDFWNDAENAQKVLKARTAMEKDVTAWENL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D   L+EL  EE+D + L E +     ++  V   +F  +LSG  D++ A++ ++
Sbjct: 72  DRQARDIRELIELGSEEEDEATLAEVAAMNAELENGVSQAEFRRMLSGPHDASGAFVSIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA MLLRMY R+ EK+ ++TE  +  +G+ AGIK  T    G  AYG+LK
Sbjct: 132 SGAGGTESQDWAEMLLRMYLRYCEKKGWRTEITDYQEGDGAGIKGVTFAATGEFAYGYLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQ 241
            + G+HRLVRISP+DS++RRHTSF+S++V+P + ++ IE++I+ESD RIDTYR+SGAGGQ
Sbjct: 192 ADAGIHRLVRISPFDSSARRHTSFASVFVFPVIEEEDIEVKIAESDLRIDTYRSSGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSA+RITH+PTG+VV CQ ERSQH NKA A  +LR+KLYE+EL++RE  A+    
Sbjct: 252 HVNTTDSAIRITHLPTGIVVACQSERSQHMNKATAMKVLRSKLYEMELREREAKASDIAG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            K EIGWG QIRSYVL PY+MVKDLRT +E  +P  VLDG LDDF+   L 
Sbjct: 312 EKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGALDDFVVPFLM 362


>gi|91794477|ref|YP_564128.1| peptide chain release factor 2 [Shewanella denitrificans OS217]
 gi|91716479|gb|ABE56405.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella
           denitrificans OS217]
          Length = 352

 Score =  282 bits (722), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 177/343 (51%), Positives = 232/343 (67%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD+ N  +RL  ++ + E   +W     A+ L +ER  L+  +  I ++   L D 
Sbjct: 8   LGGIFDYANKKERLEEVSLELESSAVWNEPERAQALGKERSALEAVVKTIDDLDSGLEDI 67

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L+ELA+EEDD     E S  L  ++  +E  +F  + SG  DS D YL++ +G+GGTE
Sbjct: 68  EGLVELAIEEDDEDTFNEASAELDELERRLEDLEFRRMFSGPNDSADCYLDIQSGSGGTE 127

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANM+LRMY RW E   F  E +E+ DG+ AGIK AT+   G  A+GWL+ E GVHR
Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS+ RRHTSF S++VYP +DD IEI+I+ S+ RIDTYRASGAGGQHVN T+SA
Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDIEIDINPSELRIDTYRASGAGGQHVNKTESA 247

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +RITH+PT  VVQCQ  RSQHKNK  A   L+AKLYELE+ K+       E +K++IGWG
Sbjct: 248 IRITHLPTNTVVQCQSGRSQHKNKDSAMKQLKAKLYELEMMKQNVDKQAAEDAKSDIGWG 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 308 SQIRSYVLDD-ARIKDLRTGVENRNTQTVLDGDLDKFIEASLK 349


>gi|116494437|ref|YP_806171.1| protein chain release factor B [Lactobacillus casei ATCC 334]
 gi|227535599|ref|ZP_03965648.1| peptide chain release factor RF2 [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239631186|ref|ZP_04674217.1| peptide chain release factor 2 [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|301065947|ref|YP_003787970.1| protein chain release factor B [Lactobacillus casei str. Zhang]
 gi|116104587|gb|ABJ69729.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus
           casei ATCC 334]
 gi|227186729|gb|EEI66796.1| peptide chain release factor RF2 [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239525651|gb|EEQ64652.1| peptide chain release factor 2 [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|300438354|gb|ADK18120.1| Protein chain release factor B [Lactobacillus casei str. Zhang]
 gi|327381888|gb|AEA53364.1| Peptide chain release factor 2 [Lactobacillus casei LC2W]
 gi|327385049|gb|AEA56523.1| Peptide chain release factor 2 [Lactobacillus casei BD-II]
          Length = 368

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 155/349 (44%), Positives = 223/349 (63%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           +L  LGG FD D   +R++    +  +P  W +   A+ ++     L         +++ 
Sbjct: 13  KLINLGGHFDLDALNERITENEGRMAEPGFWDDSEAAQKVIDNNNALKEKHDRFYALENE 72

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           L D     EL  +E D  + QE    ++ ++ +++  + + LL+G  D N+A LE+H GA
Sbjct: 73  LEDLEAGFELLQDEPDKDLQQEEEAKIKDLQEKLDKYEMQLLLNGPYDHNNAILEIHPGA 132

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTESQDW +ML+RMY RWA++  FK E  +   G+EAGIKS TLLI G NAYG LK E+
Sbjct: 133 GGTESQDWGSMLMRMYQRWADQNGFKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEK 192

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVRISP+DS  RRHTSF+S+ V P +D+SIE+++   D +++ +R+SGAGGQH+N 
Sbjct: 193 GVHRLVRISPFDSAGRRHTSFASVDVMPELDNSIEVDLRPEDIKMEVFRSSGAGGQHINK 252

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T SAVR+ H+PTG+V   Q +RSQ +NKA A  ML+AKLY+ E + +   A   +  + +
Sbjct: 253 TSSAVRLIHLPTGIVTSSQAQRSQFQNKATAMAMLKAKLYQREEEAKRAKAKAIQGEQKD 312

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + +G QIRSYV  PY MVKD RTN E  + + V+DGDL+ F+ A L  +
Sbjct: 313 VAFGSQIRSYVFHPYTMVKDHRTNYETGNGNAVMDGDLNPFINAYLQWE 361


>gi|54307774|ref|YP_128794.1| putative peptide chain release factor 2 [Photobacterium profundum
           SS9]
 gi|46912197|emb|CAG18992.1| putative peptide chain release factor 2 [Photobacterium profundum
           SS9]
          Length = 353

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 179/346 (51%), Positives = 239/346 (69%), Gaps = 1/346 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  LGG FD+D   ++L  +N + E P +W     A+ L + R  L+  +  I ++   +
Sbjct: 6   LTSLGGTFDYDAKKEQLEEVNAELEQPAVWNEPERAQALGKSRAALEAVVETIDQLDLGV 65

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LLELA+EEDD     E    L  ++ ++   +F  + SGE DS+D Y+++ AG+G
Sbjct: 66  EDVAGLLELAVEEDDQETFDEIEPELAELEAKLAKLEFRRMFSGEYDSSDCYIDLQAGSG 125

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW +M+LRMY RWA+ + FKTE +E+  G+ AG+KSAT+ + G  AYGWL+ E G
Sbjct: 126 GTEAQDWTSMMLRMYLRWADAKGFKTEIIEVSAGDVAGLKSATIRLVGEYAYGWLRTETG 185

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR SP+DS  RRHTSF+S +VYP +DD+I I+I+ SD RID YRASGAGGQHVNTT
Sbjct: 186 VHRLVRKSPFDSGGRRHTSFASAFVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTT 245

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITH+PT +VVQCQ +RSQHKNK QA   L+AKL+E E+QK+       E SK++I
Sbjct: 246 ESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEFEMQKKNAEKQANEDSKSDI 305

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           GWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 306 GWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLK 350


>gi|255029564|ref|ZP_05301515.1| peptide chain release factor 2 [Listeria monocytogenes LO28]
          Length = 366

 Score =  282 bits (721), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 175/351 (49%), Positives = 230/351 (65%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           ++Q+    GLFD D+   R++ L  +  DP+ W +   A+ ++ E             ++
Sbjct: 14  AQQIKDFRGLFDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALE 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           +      I LEL  EE D  + +E   +++     +   + + +LS   D N+A LE+H 
Sbjct: 74  EEQESMEISLELLKEEADEDLQEELEKDIKAYMATISAFELKLMLSDPYDKNNAILELHP 133

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTESQDW +MLLRMY RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+LK 
Sbjct: 134 GAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKA 193

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+DS+ RRHTSF S+ V P +D  IEIE+   D +IDTYRA+GAGGQH+
Sbjct: 194 EKGVHRLVRISPFDSSGRRHTSFVSVDVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHI 253

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVR+THIP+G+VV CQ ERSQ KN+ QA  ML+ KLY+ E +++E         +
Sbjct: 254 NTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQ 313

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            EIGWG QIRSYV  PY MVKD RTN E  +   V+DGDLDDF+ A L  +
Sbjct: 314 KEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 364


>gi|121603978|ref|YP_981307.1| peptide chain release factor 2 [Polaromonas naphthalenivorans CJ2]
 gi|120592947|gb|ABM36386.1| bacterial peptide chain release factor 2 (bRF-2) [Polaromonas
           naphthalenivorans CJ2]
          Length = 347

 Score =  282 bits (721), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 166/343 (48%), Positives = 240/343 (69%), Gaps = 1/343 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+    ++L+ +N   EDP +W N   A+ L RE++ L++ +  +  ++  L DN 
Sbjct: 4   GGIFDYPAKARKLNEVNAALEDPKVWDNPKRAQELGREKKSLEDVVLILDRLEQELSDNT 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L E++ +++D + ++       ++  EVE  +F  + +  AD  + +L++ AGAGGTE+
Sbjct: 64  ELFEMSKDDNDEAGMRAIEGEAAKVAAEVEKMEFRRMFNNPADPLNCFLDIQAGAGGTEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA+MLLR Y ++AE++ FKT   +   G+ AGIK AT+ I+G  A+G L+ E GVHRL
Sbjct: 124 CDWASMLLRQYLKYAERKGFKTTIEDESAGDTAGIKGATIKIEGEYAFGLLRTETGVHRL 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS+  RHTSF+S++VYP +DDSIEI+I+ +D R DTYRASGAGGQH+N TDSAV
Sbjct: 184 VRKSPFDSSGGRHTSFASVFVYPEIDDSIEIDINPADVRTDTYRASGAGGQHINKTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+THIPTG+VVQCQ+ RSQH N+  AW  LR++LY+ EL+K++E     E +KT++GWG 
Sbjct: 244 RLTHIPTGIVVQCQEGRSQHGNRDVAWKRLRSRLYDFELRKQQEAQQKLEDTKTDVGWGH 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QIRSYVL     +KDLRTN E ++   VLDGDLD F++A+L  
Sbjct: 304 QIRSYVLD-NSRIKDLRTNYETSATQKVLDGDLDPFIEASLKQ 345


>gi|33151768|ref|NP_873121.1| peptide chain release factor 2 [Haemophilus ducreyi 35000HP]
 gi|33147989|gb|AAP95510.1| peptide chain release factor 2 [Haemophilus ducreyi 35000HP]
          Length = 351

 Score =  282 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 175/346 (50%), Positives = 239/346 (69%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           +  GG+FD+D  V+RL  +N + E P +W    +A+ L +ER  L+  ++ I  +   + 
Sbjct: 5   SSFGGIFDFDTKVERLEEVNAELEQPEIWNTPEKAQTLGKERSTLEMVVNTINALIQGIE 64

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   L+ELA+E +D   L E       +  ++   +F+ + SG  D+ D YL++ AG+GG
Sbjct: 65  DVEALIELAVEAEDEQTLYEAQIEADELATKLAKLEFQRMFSGPYDATDCYLDLQAGSGG 124

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G  A+GWL+ E G+
Sbjct: 125 TEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATIRITGEYAFGWLRTETGI 184

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DSN+RRHTSF++ +VYP VDD ++IEI+ +D RID YRASGAGGQHVN T+
Sbjct: 185 HRLVRKSPFDSNNRRHTSFAAAFVYPEVDDDVDIEINPADLRIDVYRASGAGGQHVNKTE 244

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+P+G+VVQCQ  RSQH+NK Q    LRAKLYE+E+ K+       E +K++IG
Sbjct: 245 SAVRITHMPSGIVVQCQNGRSQHQNKDQCMKQLRAKLYEMEMMKKNAEKQAMEENKSDIG 304

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 305 WGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 349


>gi|83951928|ref|ZP_00960660.1| peptide chain release factor 2 [Roseovarius nubinhibens ISM]
 gi|83836934|gb|EAP76231.1| peptide chain release factor 2 [Roseovarius nubinhibens ISM]
          Length = 375

 Score =  282 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 202/352 (57%), Positives = 250/352 (71%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L  L    DWD A  RL   N + EDP+LW +  +A+ LMRERQ L +AI     
Sbjct: 11  EIEKSLELLRQRMDWDTAKHRLEEFNARVEDPNLWDDPAKAQKLMRERQSLVDAIDTHDA 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I   + DN+ L+EL   E D  ++ E    L+ +K +   K+ E+LL+GEAD+ND +LE+
Sbjct: 71  INQEMSDNIELIELGEMEGDNEVIGEAESALKSLKEKAGAKELEALLNGEADANDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA+ML RMY RWAEKR +  E      GEEAGIKSA   I G NAYGWL
Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKRGYTVELQSESAGEEAGIKSAAYKISGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS ++RHTSFSS+WVYPVVDD IEIE++ +D RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPYDSAAKRHTSFSSVWVYPVVDDDIEIEVNPADIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL +R    N    
Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRTADINAAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRTN+E +    VLDGDLD FM ATLA+
Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTNVETSDTKGVLDGDLDQFMAATLAM 361


>gi|163748442|ref|ZP_02155696.1| peptide chain release factor 2 [Shewanella benthica KT99]
 gi|161332020|gb|EDQ02697.1| peptide chain release factor 2 [Shewanella benthica KT99]
          Length = 352

 Score =  282 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 167/343 (48%), Positives = 230/343 (67%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D   +RL  ++ + E   +W +   A+ L +ER  L+  +  I ++   L D 
Sbjct: 8   FGGIFDYDAKKERLEEVSRELESSDIWNDPDNAQALGKERAALELIVKTIDDMDTGLEDV 67

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L+ELA+EE D     + S  L  +   +   +F  + SG  D  ++YL++ +G+GGTE
Sbjct: 68  EGLVELAIEEADEETFNDASAELDGLDKRLADLEFRRMFSGPHDIANSYLDIQSGSGGTE 127

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANM+LRMY RW +   FK E +E+  G+ AGIK AT+   G  A+G L+ E GVHR
Sbjct: 128 AQDWANMVLRMYLRWGDAHDFKPELIEVTAGDVAGIKGATIKFTGEYAFGSLRTETGVHR 187

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS+ +RHTSF S++VYP +DD+IEI+I+ SD RIDTYRASGAGGQH+N T+SA
Sbjct: 188 LVRKSPFDSSGKRHTSFCSVFVYPEIDDTIEIDINPSDLRIDTYRASGAGGQHINKTESA 247

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +RITH+PT  VVQCQ +RSQHKN+  A   L+AKLYELE+ K+ E     E +K++IGWG
Sbjct: 248 IRITHLPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNEEKQAAEDAKSDIGWG 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L 
Sbjct: 308 SQIRSYVLDD-ARIKDLRTGVESRNTQSVLDGGLDMFIEASLK 349


>gi|307332073|ref|ZP_07611163.1| serine/threonine protein kinase [Streptomyces violaceusniger Tu
           4113]
 gi|306882296|gb|EFN13392.1| serine/threonine protein kinase [Streptomyces violaceusniger Tu
           4113]
          Length = 830

 Score =  282 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 158/353 (44%), Positives = 218/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  +L   +   +E+
Sbjct: 473 LSSTMGSIEAVLDLDKMRADIAVLEEQAAAPSLWDDPENAQKVTSKLSYLQGHLRRAEEL 532

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA +E D     E    L+ ++  V+  +  +LLSGE DS +A + V 
Sbjct: 533 RGRIDDLEVLFELAADEGDADARAEAESELEAVRKAVDEMEVRTLLSGEYDSREALVNVR 592

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KT+  E    EEAGIKS T  ++ P AYG L 
Sbjct: 593 AEAGGVDAADFAEQLQRMYLRWAERHGYKTQIYETSYAEEAGIKSTTFAVQIPYAYGTLS 652

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 653 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 712

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   +  +  
Sbjct: 713 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMDALKGD 772

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  VLDG++D F++A +  +K
Sbjct: 773 GGN-SWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLEAGIRWRK 824


>gi|296111417|ref|YP_003621799.1| peptide chain release factor 2 [Leuconostoc kimchii IMSNU 11154]
 gi|295832949|gb|ADG40830.1| peptide chain release factor 2 [Leuconostoc kimchii IMSNU 11154]
          Length = 372

 Score =  282 bits (721), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 153/354 (43%), Positives = 223/354 (62%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   +       D +   + ++    +  +P  W + ++A+ ++ E   L N       
Sbjct: 12  EIKENITRFRSTLDLEALTEEIADFENRMTEPGFWDDNVKAQKVIEENNVLKNRRDSFLN 71

Query: 62  IQDRLCDNLILLEL-ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           + ++  +  +L+E+ + + DD  +L E  +N+ +I+ +VE    E LL+   D+N+A LE
Sbjct: 72  LTNQAEEIDVLIEMLSEDPDDVEMLAELEENVAKIQKDVEAYNLEQLLTEPYDANNAILE 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           VH G+GGTES DW   L RMYTRWA++  F+ + L+ H G+EAGI SAT+ I G NA+G+
Sbjct: 132 VHPGSGGTESTDWGANLYRMYTRWAQQHGFQVDVLDYHAGDEAGIDSATIKITGHNAFGF 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E+GVHR VRISP+DS  RRHTSF S+ V P +DD+IE+E+ + D ++D +R+ GAGG
Sbjct: 192 LRSEKGVHRFVRISPFDSAGRRHTSFVSVDVMPELDDTIEVEVRDDDIKMDVFRSGGAGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN   + VR+TH PTG+VV    ER+Q+ N+  A  +L+ KLY+LEL+K+E       
Sbjct: 252 QNVNKVSTGVRLTHEPTGIVVSSTVERTQYGNRDYAMRLLKGKLYQLELEKQEAERAALT 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             K E GWG QIRSYVL PYQMVKD RTN E   P  VLDGDLD F+ A L  +
Sbjct: 312 GEKLENGWGSQIRSYVLHPYQMVKDHRTNYETNQPQQVLDGDLDPFINAYLQWQ 365


>gi|162447197|ref|YP_001620329.1| peptide chain release factor RF-2 [Acholeplasma laidlawii PG-8A]
 gi|189039998|sp|A9NF23|RF2_ACHLI RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|161985304|gb|ABX80953.1| peptide chain release factor RF-2 [Acholeplasma laidlawii PG-8A]
          Length = 365

 Score =  282 bits (720), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 163/355 (45%), Positives = 223/355 (62%), Gaps = 3/355 (0%)

Query: 1   MKL-SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
           ++L   ++  L    D D    RL  +     +P+ W +  +AK + +E   L      I
Sbjct: 10  LELFETKIKDLENALDLDAINNRLKEIEPIMANPNFWNDSNQAKKISQELNQLTEKKQTI 69

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
             IQ++  D   L+ L   ++           +  ++ ++   + E LL+GE D N+A L
Sbjct: 70  TSIQNQYEDA--LMWLEEAKEGTESWDILEAEIDSLQKKISEFEIEVLLNGEYDHNNAIL 127

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           E+H GAGGTES DW  +L+RMY R+A  + +K E L    GEEAG+KS TL I GP AYG
Sbjct: 128 ELHPGAGGTESMDWCGILMRMYERFAGYKGYKVEILNYLAGEEAGVKSVTLRISGPYAYG 187

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            LK E+GVHRLVRISP+DSN RRHTSF S  V P +D++ E+E+ + D R+DT+++SGAG
Sbjct: 188 NLKSERGVHRLVRISPFDSNKRRHTSFVSCDVAPEIDETSEVELKDDDIRMDTFQSSGAG 247

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTT SAVR+THIPTG+VV  Q ERSQ KNK  A  +L++KL + EL++++   N  
Sbjct: 248 GQSVNTTYSAVRLTHIPTGIVVNIQNERSQIKNKEAAMQILKSKLIQKELEEKQAKLNAL 307

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +  K++IGWG QIRSYV QPYQMVKD RTN E  +   V+DGD+D F+ A L  K
Sbjct: 308 KGEKSDIGWGSQIRSYVFQPYQMVKDHRTNYEVGNIQSVMDGDIDGFINAYLKSK 362


>gi|90413184|ref|ZP_01221180.1| putative peptide chain release factor 2 [Photobacterium profundum
           3TCK]
 gi|90325875|gb|EAS42327.1| putative peptide chain release factor 2 [Photobacterium profundum
           3TCK]
          Length = 353

 Score =  282 bits (720), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 179/346 (51%), Positives = 239/346 (69%), Gaps = 1/346 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  LGG FD+D   ++L  +N + E P +W     A+ L + R  L+  +  I ++   +
Sbjct: 6   LTFLGGTFDYDAKKEQLEEVNAELEQPAVWNEPERAQALGKSRAALEAVVETIDQLDLGV 65

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LLELA+EEDD     E    L  ++ ++   +F  + SGE DS+D Y+++ AG+G
Sbjct: 66  EDVAGLLELAVEEDDQETFDEIEPELAELEAKLAKLEFRRMFSGEYDSSDCYIDLQAGSG 125

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW +M+LRMY RWA+ + FKTE +E+  G+ AG+KSAT+ + G  AYGWL+ E G
Sbjct: 126 GTEAQDWTSMMLRMYLRWADAKGFKTEIIEVSAGDVAGLKSATIRLVGEYAYGWLRTETG 185

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR SP+DS  RRHTSF+S +VYP +DD+I I+I+ SD RID YRASGAGGQHVNTT
Sbjct: 186 VHRLVRKSPFDSGGRRHTSFASAFVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTT 245

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITH+PT +VVQCQ +RSQHKNK QA   L+AKL+E E+QK+       E SK++I
Sbjct: 246 ESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEFEMQKQNAEKQANEDSKSDI 305

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           GWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 306 GWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLK 350


>gi|115311855|sp|Q49VV3|RF2_STAS1 RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 373

 Score =  282 bits (720), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 160/352 (45%), Positives = 227/352 (64%), Gaps = 1/352 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           + +L  L G  D +     +        DP  W N  +A+ ++ +   L + ++  + ++
Sbjct: 14  NEKLEQLRGSLDLEAKETNIQEYEEMMTDPTFWDNQEKAQDVIDKNNALKSVVNAYRTLE 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D      L LEEDD ++ Q+   ++Q  K E++  + + LL G  D+N+A +E+H 
Sbjct: 74  SELEDMDTTRALLLEEDDETMKQDLEQSVQDFKNELDQFELQLLLDGPYDANNAIMELHP 133

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTESQDW NMLLRMY R+ E++ F  E  +   G+EAG+KS TL++KG NAYG+LK 
Sbjct: 134 GAGGTESQDWTNMLLRMYQRYCEQKGFNVEIADYLPGDEAGVKSVTLIVKGHNAYGYLKA 193

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQH 242
           E+GVHRLVRISP+DS+ RRHTSF+S  V P  ++  IEI+I+  D  +DT+RASGAGGQH
Sbjct: 194 EKGVHRLVRISPFDSSGRRHTSFASCDVIPQFNNTEIEIDINPDDITVDTFRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T+SA+RITH PTG+VV  Q ERSQ KN+  A   L++KLY+L+++++E+        
Sbjct: 254 INKTESAIRITHHPTGIVVNNQNERSQIKNREAAMKTLKSKLYQLKIEEQEQEMAEIRGE 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + EIGWG QIRSYV  PY MVKD RTN E      V+DGD+  F++A L  +
Sbjct: 314 QKEIGWGSQIRSYVFHPYAMVKDHRTNEETGKVDAVMDGDIGPFIEAFLRSQ 365


>gi|254510235|ref|ZP_05122302.1| peptide chain release factor 2 [Rhodobacteraceae bacterium KLH11]
 gi|221533946|gb|EEE36934.1| peptide chain release factor 2 [Rhodobacteraceae bacterium KLH11]
          Length = 375

 Score =  282 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 200/352 (56%), Positives = 254/352 (72%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L  L    D++ A+ RL   N + EDP+LW N   A+ LMRERQ L +AI   + 
Sbjct: 11  EIEKSLELLAQRMDYETALHRLEEFNARVEDPNLWDNPENAQKLMRERQMLVDAIETYES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L DN+ L+EL   E+D  ++Q+  D +Q+++ +   K+ E+LL GEADSND +LE+
Sbjct: 71  IKTDLSDNIELIELGEMEEDGEVVQDAEDAIQKLRAKSAKKELEALLDGEADSNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTES DWA+ML RMY RWAEK+ +  E      GEEAGIKSA   I G NAYGWL
Sbjct: 131 NSGAGGTESCDWASMLARMYVRWAEKKGYTVELQSETAGEEAGIKSAAYKITGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSF S+WVYPVVDD+IEIE++ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFCSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PTG+VV    E+SQH+N+  A   L+++LY+ EL +R    N    
Sbjct: 251 HVNTTDSAVRITHLPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQQELDRRNADINAAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRTN E +    VLDGDLD FM ATLA+
Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTNHETSDTKGVLDGDLDGFMAATLAL 361


>gi|187924547|ref|YP_001896189.1| peptide chain release factor 2 [Burkholderia phytofirmans PsJN]
 gi|187715741|gb|ACD16965.1| peptide chain release factor 2 [Burkholderia phytofirmans PsJN]
          Length = 417

 Score =  282 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 180/344 (52%), Positives = 249/344 (72%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+D+   RL  +N + EDP +W +   A+ L RE++ LD+ +  +  + + L D 
Sbjct: 73  YGGIFDYDDKALRLIEVNRELEDPDVWNDSKHAQALGREKKLLDDTVGKLTSLDNDLRDA 132

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L ++A EEDD   L     + Q I+  V   +F  + +  AD N+A+L++ AGAGGTE
Sbjct: 133 QDLFDMAREEDDEETLLACESDAQGIEQRVADMEFRRMFANPADPNNAFLDIQAGAGGTE 192

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           + DWA+MLLR Y R+ E++ FKTE LE  DG+ AGIK+AT+ I+G  AYG+L+ E GVHR
Sbjct: 193 ACDWASMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHR 252

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS+  RHTSFSS++VYP +DDSIE++I+ +D RIDTYRASGAGGQH+N TDSA
Sbjct: 253 LVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTDSA 312

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIP+G+VVQCQ +RSQH+N+A+A  ML+++LYE E++KR+E  +  E+ KT++GWG
Sbjct: 313 VRITHIPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQEEQDKLEAGKTDVGWG 372

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSYVL     +KDLRTN+E ++   VLDGDLD F+ A+L  
Sbjct: 373 HQIRSYVLD-NSRIKDLRTNVEISNTKSVLDGDLDPFISASLKQ 415


>gi|325295572|ref|YP_004282086.1| hypothetical protein Dester_1396 [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325066020|gb|ADY74027.1| hypothetical protein Dester_1396 [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 374

 Score =  282 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 177/353 (50%), Positives = 243/353 (68%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+  +   + G FD +   ++L+ +  +    + W +  +A+ +  ER  +++ ++    
Sbjct: 14  KVKDKYFEIRGYFDIEKMKKKLTEIEEEMSSANFWNDQKKAQSISMERNRIESELNTFSS 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+ +L D   LLE+A EE + S+L E    L+ I+ E+   + +++LSGE D N+A + +
Sbjct: 74  IEQQLEDIETLLEIAEEESEESLLDEAESFLKNIERELNSLEVKTVLSGEFDKNNAIVTI 133

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTES DWA ML+RMY RWAE++ F+TE L++ + EEAGIKSAT+LIKG  AYG L
Sbjct: 134 HAGAGGTESCDWAEMLMRMYLRWAERKGFETEILDLQENEEAGIKSATILIKGAYAYGLL 193

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E G HRLVRISP+DSN+RRHTSF  + V P +D+ I+IEI + D RIDTYRASGAGGQ
Sbjct: 194 RAEHGTHRLVRISPFDSNARRHTSFCGVIVVPEIDEDIDIEIKDEDLRIDTYRASGAGGQ 253

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITH+PTG+VV CQ ERSQ +N+ +A  +L+A+LYELE QKREE       
Sbjct: 254 HVNKTDSAVRITHLPTGIVVTCQSERSQIQNRQRAMKILKARLYELERQKREEKIAEARG 313

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               I WG QIRSYV  PYQMVKD RT IE ++ + V+DG++D F++  L  K
Sbjct: 314 EHKTIAWGNQIRSYVFHPYQMVKDHRTGIETSNINAVMDGEIDQFIEGFLKQK 366


>gi|319795017|ref|YP_004156657.1| hypothetical protein Varpa_4378 [Variovorax paradoxus EPS]
 gi|315597480|gb|ADU38546.1| hypothetical protein Varpa_4378 [Variovorax paradoxus EPS]
          Length = 367

 Score =  282 bits (720), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 172/351 (49%), Positives = 245/351 (69%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   L    D+D   +RL  +N   EDP++W +  +A+ L RE++ LD+ +  +  +
Sbjct: 16  LSVRTVDLRRYLDYDAKAERLRTVNASLEDPNVWNDPKKAQELGREKKSLDDVVVTLDRL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L DN  L E++ EE D   LQ  SD+   ++ +++  +F  + +  AD  +A++++ 
Sbjct: 76  TNGLSDNSELFEMSKEEGDMDGLQSISDDAATLEADIKQLEFRRMFNNPADPLNAFVDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y ++AE++ FKT+  +   G+ AGIK AT+ ++G  A+G L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLKYAERKGFKTQIEDETPGDTAGIKGATIKVEGDYAFGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+  RHTSF+SI+VYP +DDSIEI+I+ SD R DT+RASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASIFVYPEIDDSIEIDINPSDVRTDTFRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+ E++KR+E     E S
Sbjct: 256 INKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDHEMRKRQEEQQKLEDS 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 316 KTDVGWGHQIRSYVLD-NSRIKDLRTNVEVSATQKVLDGDLDVFIEASLKQ 365


>gi|304391525|ref|ZP_07373467.1| peptide chain release factor 2 [Ahrensia sp. R2A130]
 gi|303295754|gb|EFL90112.1| peptide chain release factor 2 [Ahrensia sp. R2A130]
          Length = 374

 Score =  281 bits (719), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 200/353 (56%), Positives = 263/353 (74%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++++ ++ L    DW+ A  RL  LN  +EDP LW +  +A++LM+ERQ L+  I+ I  
Sbjct: 11  EITQAISLLRRHLDWEKANTRLEELNAASEDPDLWNDPGKAQLLMKERQQLETGITSING 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D   L+ELA  EDD  +L E    L+ +  ++  +Q  +LLSGEAD+ND Y EV
Sbjct: 71  LEGDLGDTKDLIELAEMEDDADVLAEAESALRELHADLGKRQAATLLSGEADANDTYFEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H+GAGGTES DWANMLLRMY RWAE   +K E      G+EAGIK+AT+L+KG NAYG++
Sbjct: 131 HSGAGGTESNDWANMLLRMYIRWAETNGYKVEVQATTSGDEAGIKAATVLVKGANAYGYM 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS ++RHTSFSS+WVYPV+DD+IEI + +++ R+DT+R+SGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSQAKRHTSFSSVWVYPVIDDNIEIIVPDNEIRLDTFRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG+VV    E+SQH+N+A A   L+++LYE E+QKR E       
Sbjct: 251 HVNTTDSAVRITHIPTGIVVTSS-EKSQHQNRANAMKALKSRLYEAEMQKRNEATQAAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +K++IGWG QIRSYVLQPYQ+VKDLRT +E T+PS VLDGDL+ FM+A LA +
Sbjct: 310 AKSDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPSAVLDGDLNAFMEAALAHQ 362


>gi|302383300|ref|YP_003819123.1| hypothetical protein Bresu_2190 [Brevundimonas subvibrioides ATCC
           15264]
 gi|302193928|gb|ADL01500.1| conserved hypothetical protein [Brevundimonas subvibrioides ATCC
           15264]
          Length = 373

 Score =  281 bits (719), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 201/352 (57%), Positives = 254/352 (72%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + +  L    DWD A ++L  LN + EDP LW +   A+ + RER  L   I  + E+
Sbjct: 12  IEQSVALLRRRLDWDVANRKLDELNARVEDPTLWNDPDAAQAVSRERSRLKTQIDTVLEM 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L + ++L ++A EE D + L+E    L+ IK      + E+LLSGEAD NDAYLEV+
Sbjct: 72  ESGLEEGVMLADMADEEGDEATLEEARAALKAIKDRASRAELEALLSGEADGNDAYLEVN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTES DWA MLLRMY+RWA+   ++ +     DG++AGIKSAT+L+ GPNAYGWLK
Sbjct: 132 SGAGGTESCDWAGMLLRMYSRWAKAHGYEVQIEASEDGDQAGIKSATILVTGPNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYD+ ++RHTSF+S+ V PVVDD+IEI+I+ +D R DTYRASG+GGQH
Sbjct: 192 SESGVHRLVRISPYDAAAKRHTSFASVGVSPVVDDTIEIDINPADVRTDTYRASGSGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVR+THIPT  VV CQ  RSQH+N+ QAW MLR +LYELELQKRE  A     +
Sbjct: 252 INKTDSAVRLTHIPTNTVVACQAGRSQHQNREQAWKMLRGRLYELELQKREAAAQALADA 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KT+IGWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD FM A LA +
Sbjct: 312 KTDIGWGHQIRSYVLQPYQMVKDLRTEVETSDTQGVLDGDLDAFMGAALAAR 363


>gi|323143525|ref|ZP_08078205.1| peptide chain release factor 2 [Succinatimonas hippei YIT 12066]
 gi|322416719|gb|EFY07373.1| peptide chain release factor 2 [Succinatimonas hippei YIT 12066]
          Length = 347

 Score =  281 bits (719), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 171/344 (49%), Positives = 235/344 (68%), Gaps = 1/344 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGG+FD++   +RL  +N   EDP +W +  +A+ L +ERQ L + +S   ++     D
Sbjct: 2   LLGGIFDFETKKERLEEVNGLLEDPQVWNDPEKAQQLGKERQVLSSVVSRFDKLYSGFDD 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
            L+L EL  EE D   ++E      +++  +   +FE + S   D++D Y+++ +G+GGT
Sbjct: 62  VLMLFELGSEEGDEDSIKEAYSEADKLEEVLNALEFERMFSKPNDNSDCYMDIQSGSGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDWA M++RMY ++ EK  F    +E  +GE AGIKSATL   GP A+GWL+ E G+H
Sbjct: 122 EAQDWAEMVMRMYLKFGEKHGFDCTVIECSEGEVAGIKSATLKFAGPYAFGWLRTETGIH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DSN+RRHTSF S +VYP +D+ I++EI+ +D +ID +R+SGAGGQHVN T+S
Sbjct: 182 RLVRKSPFDSNNRRHTSFCSAFVYPEIDNDIKVEINPADLKIDVFRSSGAGGQHVNKTES 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITHIPTGVVV CQ ERSQ +N+ QA   LRAKLYELEL+K++      E SK +IGW
Sbjct: 242 AVRITHIPTGVVVSCQNERSQFQNRDQAMKQLRAKLYELELRKQQSEQQAIEDSKADIGW 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G QIRSYVL     VKDLRT +E      VL+GDLD F++A+L 
Sbjct: 302 GSQIRSYVLDD-ARVKDLRTQVECRDTQRVLNGDLDQFIEASLK 344


>gi|260433401|ref|ZP_05787372.1| peptide chain release factor 2 [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260417229|gb|EEX10488.1| peptide chain release factor 2 [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 375

 Score =  281 bits (719), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 198/352 (56%), Positives = 253/352 (71%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L  L    D++ A  RL   N + EDP+LW N   A+ LMRERQ L +AI   + 
Sbjct: 11  EIQKSLELLAQRMDYETAAHRLEEFNARVEDPNLWDNPENAQKLMRERQVLVDAIETYES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L DN+ L+EL   E D  ++++  + L++++ +   K+ E+LL GEAD+ND +LE+
Sbjct: 71  IKTDLKDNVELIELGEMEGDEEVVKDAEEALKKLRDKAAEKELEALLDGEADANDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA+ML RMY RWAEK+ +K E      GEEAGIKSA   I G NAYGWL
Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKKGYKVELQSETPGEEAGIKSAAYKISGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS ++RHTSFSS+WVYPVVDD+IEIE++ +D R+DTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPYDSAAKRHTSFSSVWVYPVVDDNIEIEVNPADIRVDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG+VV    E+SQH+N+  A   L+++LY++EL +R    N    
Sbjct: 251 HVNTTDSAVRITHIPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAEINAAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRT  E +    VLDGDL  FM ATLA+
Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTGYETSDTKGVLDGDLGGFMAATLAM 361


>gi|315121916|ref|YP_004062405.1| peptide chain release factor 2 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495318|gb|ADR51917.1| peptide chain release factor 2 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 354

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 296/349 (84%), Positives = 329/349 (94%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +NCLGGLFDWDNA++RL FLN K E+P+LW+ V EAK+LMRERQHLDNA+S +K +QDRL
Sbjct: 1   MNCLGGLFDWDNALKRLHFLNDKAENPNLWEKVEEAKILMRERQHLDNAVSSLKALQDRL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            DN+ LL+LA+EE++ S+LQE+ DNL+++KL+ EYKQFESL SGEADSND YLEVHAGAG
Sbjct: 61  DDNIALLDLAVEENNSSVLQESLDNLKQLKLDTEYKQFESLFSGEADSNDVYLEVHAGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTESQDWANML+RMY RW+E+RKFK + LE+HDGEEAGIKSATLLIKGPNAYGWLK EQG
Sbjct: 121 GTESQDWANMLVRMYIRWSERRKFKIDLLEVHDGEEAGIKSATLLIKGPNAYGWLKEEQG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISPYDSNSRRHTSFSS+WVYPVVD+SIEIEI+ESDCRIDTYRASGAGGQHVNTT
Sbjct: 181 VHRLVRISPYDSNSRRHTSFSSVWVYPVVDESIEIEINESDCRIDTYRASGAGGQHVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY+LELQKREEIANIGESSKTEI
Sbjct: 241 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYDLELQKREEIANIGESSKTEI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           GWGRQIRSYVLQPYQMVKDLRTNIEK+SP DVL+GDLDDFMKA LA+KK
Sbjct: 301 GWGRQIRSYVLQPYQMVKDLRTNIEKSSPLDVLNGDLDDFMKAALALKK 349


>gi|253752128|ref|YP_003025269.1| peptide chain release factor 2 [Streptococcus suis SC84]
 gi|253753953|ref|YP_003027094.1| peptide chain release factor 2 [Streptococcus suis P1/7]
 gi|253755172|ref|YP_003028312.1| peptide chain release factor 2 [Streptococcus suis BM407]
 gi|251816417|emb|CAZ52048.1| peptide chain release factor 2 [Streptococcus suis SC84]
 gi|251817636|emb|CAZ55384.1| peptide chain release factor 2 [Streptococcus suis BM407]
 gi|251820199|emb|CAR46580.1| peptide chain release factor 2 [Streptococcus suis P1/7]
          Length = 364

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 154/353 (43%), Positives = 215/353 (60%), Gaps = 2/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L ++L    G  D +   + ++ L  K  +P  W + + A+   +E   L N      +
Sbjct: 12  ELGKKLTSFRGSLDLEGLEEEIAILENKMTEPDFWNDNLAAQKTSQELNELKNTYGNFHQ 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + D   ++ ILL+     +D S+  E  + L  +   +   +   LLS   D N+A LE+
Sbjct: 72  MLDLYDESEILLDF--LAEDESVRDELVEKLVELDKTMTAYEMTLLLSEPYDHNNAILEI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H G+GGTE+QDW  MLLRMY R+   + F  E L+   G+EAGIKS TL   GPNAYG L
Sbjct: 130 HPGSGGTEAQDWGEMLLRMYQRYGNAKGFIVETLDYQAGDEAGIKSVTLSFTGPNAYGLL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS  RRHTSF+S+ V P +DD+IEIEI + + ++DT+R+ GAGGQ
Sbjct: 190 KSEMGVHRLVRISPFDSAKRRHTSFTSVEVMPELDDTIEIEIRDDEVKMDTFRSGGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN   + VR+THIPTG+V Q   +R+Q+ N+ +A  +L+AKLY+LE +K+    +  + 
Sbjct: 250 NVNKVSTGVRLTHIPTGIVTQSTVDRTQYGNRDRAMKLLQAKLYQLEQEKKAAEVDSLKG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K EI WG QIRSYV  PY MVKD RT  E      V+DGDLD F+ A L  +
Sbjct: 310 DKKEITWGSQIRSYVFTPYTMVKDHRTGYEVAQVDKVMDGDLDGFIDAYLKWR 362


>gi|163783151|ref|ZP_02178145.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881485|gb|EDP74995.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 367

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 162/353 (45%), Positives = 239/353 (67%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +   +  + D D   + L  ++        W +  +AK ++++R+ L+  ++ I+ 
Sbjct: 10  ELKERFEGIRKVLDIDRLKEELRKMDETMSAQGFWDDQEKAKKVIQKRKWLEETVNSIET 69

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D   L +    E+D        + ++ ++ +++  + ++ LSGE DS +AYL +
Sbjct: 70  LEKSLRDVEELSQ-TTPEEDTDTWAILEEEMESLEDKLKELELKTYLSGEMDSKNAYLTI 128

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGTE+ DWA+ML RMY RWAE++ +  E ++I   + AGIKS TLL+KGP AYG+L
Sbjct: 129 QAGAGGTEACDWADMLYRMYRRWAERKGYDVEVVDITPDDVAGIKSVTLLVKGPYAYGYL 188

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           +GEQGVHRLVRISP+DSN+RRHTSF+++ V P +D+ I IE+ + D +I+T+RASGAGGQ
Sbjct: 189 RGEQGVHRLVRISPFDSNARRHTSFAAVSVMPQIDEDINIEVRDEDLKIETFRASGAGGQ 248

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN TD+AVR+THIPTG+VV CQQERSQ +N+ +A  +L+AKLY+LE QK  E     E 
Sbjct: 249 YVNKTDTAVRLTHIPTGIVVSCQQERSQFQNRRKALELLKAKLYQLEQQKLMEKRKQYEG 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            KT+IGWG QIRSYV  PY++VKDLRT  E  +   V+DGD+D F++  L  +
Sbjct: 309 EKTDIGWGHQIRSYVFHPYRLVKDLRTGYETGNVDAVMDGDIDQFIEGFLKWQ 361


>gi|167767702|ref|ZP_02439755.1| hypothetical protein CLOSS21_02237 [Clostridium sp. SS2/1]
 gi|167710441|gb|EDS21020.1| hypothetical protein CLOSS21_02237 [Clostridium sp. SS2/1]
 gi|291558928|emb|CBL37728.1| bacterial peptide chain release factor 2 (bRF-2)
           [butyrate-producing bacterium SSC/2]
          Length = 373

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 177/351 (50%), Positives = 235/351 (66%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
              L  L G    +   +R+  L    E+P  W NV E++ +M+E + L   +    +++
Sbjct: 15  QEPLEDLSGSLALEAKKERIDQLELNMEEPGFWDNVEESQNVMKEVKSLKGVVEEYDDLK 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            +  D   L+++A E++D  +++E +  +   +   E  +  +LL+GE D +DA L +HA
Sbjct: 75  TKYEDIETLIDMAEEDEDADLIEEATALMDEFEKTYEELRISTLLTGEYDKDDAILTLHA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTES DWA ML RM+TRWA K+ + TE L+  DG+EAGIKS T+ I G NAYG+L+ 
Sbjct: 135 GAGGTESCDWAGMLYRMFTRWAGKKGYGTEVLDYLDGDEAGIKSVTVKITGMNAYGYLRS 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+++  +R TSF+S  V P + D IE+EI++ D RIDTYRASGAGGQH+
Sbjct: 195 EKGVHRLVRISPFNAAGKRQTSFASCDVMPDIKDDIEVEIADEDIRIDTYRASGAGGQHI 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N TDSA+RITH+PTG+VVQCQ ERSQHKNK QA  ML+ KLY L+ Q+  E  +      
Sbjct: 255 NKTDSAIRITHLPTGIVVQCQNERSQHKNKDQAMKMLKTKLYLLKQQQHLEKLSDIRGDV 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + GWG QIRSYVLQPY MVKD RTN E  +PS VLDGDLD FM A LA  
Sbjct: 315 GDNGWGNQIRSYVLQPYTMVKDHRTNFESGNPSAVLDGDLDGFMNAYLAWD 365


>gi|326204357|ref|ZP_08194215.1| peptide chain release factor 2 [Clostridium papyrosolvens DSM 2782]
 gi|325985389|gb|EGD46227.1| peptide chain release factor 2 [Clostridium papyrosolvens DSM 2782]
          Length = 373

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 172/353 (48%), Positives = 237/353 (67%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +    D  +    ++ L  K  +P  W ++  ++ ++++ + L   I     I
Sbjct: 14  LKSNLEEMRASLDIASISDEIAELEHKASEPEFWNDMENSQKILQKTKILKTKIDRFNNI 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D   L EL LEE D S++ E  + LQ +K  +E  + E+LL+G  D N+A L +H
Sbjct: 74  TSQWEDLFTLSELGLEEQDESVIPEVGEGLQLLKHNLEALRLETLLTGPYDKNNAILTLH 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDW  MLLRM+TRW E + ++ + L+  DG+EAGIKS T+ + G NAYG+LK
Sbjct: 134 AGAGGTEAQDWVQMLLRMFTRWGEAKGYEVKILDYLDGDEAGIKSVTIHVIGENAYGYLK 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DS+ RRHTSF+S  V P +DD+IEI I+  D R+DTYRASGAGGQH
Sbjct: 194 SEKGVHRLVRISPFDSSGRRHTSFASADVMPELDDTIEININPDDLRVDTYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSA+RITHIPTGVVV CQ ERSQ +NK  A  ML+AKL+EL+ ++++E     +  
Sbjct: 254 INKTDSAIRITHIPTGVVVSCQTERSQFQNKDTAMKMLKAKLFELKEREQKEKIEDLKGV 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           + EI WG QIRSYV  PY +VKD RTN E+ +   V+DG+LD F+ A L+++K
Sbjct: 314 QMEIAWGSQIRSYVFCPYTLVKDHRTNYEEGNVDAVMDGELDGFINAYLSMEK 366


>gi|319943696|ref|ZP_08017977.1| peptide chain release factor RF2 [Lautropia mirabilis ATCC 51599]
 gi|319742929|gb|EFV95335.1| peptide chain release factor RF2 [Lautropia mirabilis ATCC 51599]
          Length = 359

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 178/343 (51%), Positives = 239/343 (69%), Gaps = 1/343 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D    RL+ +N+  E P +W +   A  L +E++ LDN +  I+++   L D  
Sbjct: 16  GGIFDFDEKKNRLTEVNSALEAPDIWNDAAAALELGKEKRALDNVVGTIEQLTGSLSDTR 75

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L E+A+ E+D + L+E       I+  VE  +F  + S  AD    +LE+ AGAGGTE+
Sbjct: 76  DLYEMAVAENDDATLEELERESLGIEKGVEGLEFRRMFSNPADPGPCFLEIQAGAGGTEA 135

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA MLLR Y R+ E+R F T  LE  +G+ AGIK ATL ++G  AYG+L+ E G+HRL
Sbjct: 136 CDWAAMLLRQYLRYCERRGFTTTLLEESEGDVAGIKGATLKVEGEYAYGYLRTETGIHRL 195

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS+  RHTSF+S++VYP VDDSIE++I+ +D RID YRASGAGGQHVN T+SAV
Sbjct: 196 VRKSPFDSSGGRHTSFASVYVYPEVDDSIEVDINPADLRIDVYRASGAGGQHVNKTESAV 255

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH+PT  VVQCQ +RSQH+N+ +A  MLRA+L+ELEL+KR+   +  E+SKT+IGWG 
Sbjct: 256 RITHLPTNTVVQCQNDRSQHRNRDEAMKMLRARLFELELRKRQAEQDKVEASKTDIGWGH 315

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QIRSYVL     +KDLRTN E ++   VLDGDLDDF+  +L  
Sbjct: 316 QIRSYVLD-QSRIKDLRTNFETSNTKAVLDGDLDDFIAESLKQ 357


>gi|260587039|ref|ZP_05852952.1| peptide chain release factor 2 [Blautia hansenii DSM 20583]
 gi|331082810|ref|ZP_08331932.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260542529|gb|EEX23098.1| peptide chain release factor 2 [Blautia hansenii DSM 20583]
 gi|330400139|gb|EGG79788.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 372

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 163/350 (46%), Positives = 237/350 (67%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           +  L  +    D +N  +R+  L  + E P  W N   ++ +M+E   L   +    ++Q
Sbjct: 15  TEPLKEVRDSLDLENKEKRVEELEREMEAPGFWDNAERSQKMMKELSALKGDMEIYHKLQ 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           ++  +  +++E+  EE+D SI+ +  + L     + E+ + ++LLSGE D ++A + +HA
Sbjct: 75  NQKEEIELMIEMGYEENDPSIVPDIQEMLDEFIQDFEHIRIKTLLSGEYDKDNAIVTLHA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTES DWA+ML RMY RWA+++ F TE L+  DG+EAGIKS T  + G NAYG+LK 
Sbjct: 135 GAGGTESCDWASMLYRMYLRWADRQGFSTEVLDYLDGDEAGIKSVTFQVNGENAYGYLKS 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+++  +R TSF S  V P +++ +++EI+  D RIDTYR+SGAGGQH+
Sbjct: 195 EKGVHRLVRISPFNAAGKRQTSFVSCDVMPDIEEDVDVEINPDDLRIDTYRSSGAGGQHI 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SA+RITH+PTG+VVQCQ ERSQ +NK +A  ML+AKLY L+ Q+ E+  +  +   
Sbjct: 255 NKTSSAIRITHLPTGIVVQCQNERSQFQNKDKAMQMLKAKLYLLKQQENEKKLSGIQGEL 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           TEIGWG QIRSYV+QPY MVKD RTN E  +   V++G++D+F+ A L  
Sbjct: 315 TEIGWGNQIRSYVMQPYTMVKDHRTNEETGNVDAVMNGNIDNFINAYLKW 364


>gi|294142345|ref|YP_003558323.1| peptide chain release factor 2 [Shewanella violacea DSS12]
 gi|293328814|dbj|BAJ03545.1| peptide chain release factor 2 [Shewanella violacea DSS12]
          Length = 352

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 168/350 (48%), Positives = 234/350 (66%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +   L   GG FD+D   +RL  ++ + E+  +W +   A+ L +ER  L+  +  I ++
Sbjct: 1   MQNVLLAFGGFFDYDAKKERLEEVSRELENSDVWNDPDNAQALGKERAALELIVKTIDDM 60

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LL+LA+EE D     + S  L  ++  +E  +F  + SG  D  ++YL++ 
Sbjct: 61  DTGLEDVEGLLDLAIEEGDEDTFNDASAELDDLEKRLEDLEFRRMFSGPHDIANSYLDIQ 120

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +G+GGTE+QDWANM+LRMY RW E   +K E +E+  G+ AGIK AT+   G  A+G L+
Sbjct: 121 SGSGGTEAQDWANMVLRMYLRWGEAHDYKPELIEVTAGDVAGIKGATIKFNGEYAFGSLR 180

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQH
Sbjct: 181 TETGVHRLVRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQH 240

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T+SA+RITH+PT  VVQCQ +RSQHKN+  A   L+AKL+ELE+ K+ +     E +
Sbjct: 241 INKTESAIRITHVPTNTVVQCQNDRSQHKNRDAAMKQLKAKLFELEMLKQNQEKQAAEDA 300

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L 
Sbjct: 301 KSDIGWGSQIRSYVLDD-ARIKDLRTGVESRNTQTVLDGGLDMFIQASLK 349


>gi|295676932|ref|YP_003605456.1| hypothetical protein BC1002_1882 [Burkholderia sp. CCGE1002]
 gi|295436775|gb|ADG15945.1| conserved hypothetical protein [Burkholderia sp. CCGE1002]
          Length = 367

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 176/351 (50%), Positives = 249/351 (70%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++ + L G  D+D+   RL  +N + EDP +W +   A+ L +E++ LD+ +  +  I
Sbjct: 16  LRKRADDLRGYLDYDDKALRLIEVNRELEDPDVWNDAKHAQALGKEKKLLDDTVGKLTSI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + + D   L ++A EE D   L     + Q I+  V   +F  + +  AD N+A+L++ 
Sbjct: 76  TNDVNDAQDLFDMAREEADDETLLACEADAQAIEARVADMEFRRMFANPADPNNAFLDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y R+ E++ FKTE LE  +G+ AGIK+AT+ I+G  AYG+L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKTEVLEQTEGDVAGIKNATIKIEGEYAYGFLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH+P+G+VVQCQ +RSQH+N+A+A  ML+++LYE E++KR+   +  E+ 
Sbjct: 256 INKTDSAVRITHMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F+ A+L  
Sbjct: 316 KTDVGWGHQIRSYVLD-NSRIKDLRTNVEISNTKSVLDGDLDPFISASLKQ 365


>gi|297544050|ref|YP_003676352.1| hypothetical protein Tmath_0587 [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296841825|gb|ADH60341.1| hypothetical protein Tmath_0587 [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 368

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 168/353 (47%), Positives = 234/353 (66%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+  ++  +G   D +   + +  ++ +  DP  W ++ +++ L + ++ L   +     
Sbjct: 11  KMFEEIKEMGVSLDIEGVKREIEEIDKEMADPDFWNDIKKSQELAKRQKELKELLEEYNS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  +  D   L+EL LEE D SI +E     + +K ++E  + ++LL+G  D N+A L +
Sbjct: 71  LVRKWEDLTTLIELGLEEGDESITEEVDKEYKELKKKLEDLKIKTLLNGPYDKNNAILSI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAG+GGTE+QDWA MLLRMYTRWA  + F  E L+   GEEAGIKS TL+IKGP AYG+L
Sbjct: 131 HAGSGGTEAQDWAEMLLRMYTRWANDKGFDVETLDYLQGEEAGIKSVTLMIKGPFAYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+  RRHTSF+ + V P ++D IE+EI   D RIDTYRASGAGGQ
Sbjct: 191 KSEAGVHRLVRISPFDAAGRRHTSFALVEVLPELEDDIEVEIRPEDLRIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN T+SAVRITH+PTG+VV CQ ERSQ +N+  A  ML+AKL +L +++++E     + 
Sbjct: 251 YVNKTESAVRITHLPTGIVVSCQNERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              E  WG QIRSYV QPY +VKD RTN E  +   V+DG++DDF+ A L  K
Sbjct: 311 EHKEAAWGNQIRSYVFQPYTLVKDHRTNFEVGNVQAVMDGEIDDFINAYLKQK 363


>gi|67461211|sp|Q8Y4D8|RF2_LISMO RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 366

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 173/351 (49%), Positives = 228/351 (64%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           ++Q+    G  D D+   R++ L  +  DP+ W +   A+ ++ E             ++
Sbjct: 14  AQQIKDFRGSLDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALE 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           +      I LEL  EE D  + +E   +++     +   + + +LS   D N+A LE+H 
Sbjct: 74  EEQESMEISLELLKEEADEDLQEELEKDIKAYMATISAFELKLMLSDPYDKNNAILELHP 133

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTESQDW +MLLRMY RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+LK 
Sbjct: 134 GAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKA 193

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+DS+ RRHTSF S+ V P +D  IEIE+   D +IDTYRA+GAGGQH+
Sbjct: 194 EKGVHRLVRISPFDSSGRRHTSFVSVDVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHI 253

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVR+THIP+G+VV CQ ERSQ KN+ QA  ML+ KLY+ E +++E         +
Sbjct: 254 NTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQ 313

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            EIGWG QIRSYV  PY MVKD RTN E  +   V+DGDLDDF+ A L  +
Sbjct: 314 KEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 364


>gi|170017955|ref|YP_001728874.1| peptide chain release factor 2 [Leuconostoc citreum KM20]
 gi|238688939|sp|B1MW26|RF2_LEUCK RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|169804812|gb|ACA83430.1| Peptide chain release factor 2 [Leuconostoc citreum KM20]
          Length = 372

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 151/353 (42%), Positives = 220/353 (62%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +   +    G  D +   + ++    +  +P  W +  +A+ ++ E   L N       +
Sbjct: 13  IQENIARFQGTLDLEALTEEIADFENRMTEPGFWDDNTKAQKVIEENNVLKNRRDSFLNL 72

Query: 63  QDRLCDNLILLEL-ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            ++  +  +L+++ A +  D     E +D++ + + +VE    E LL+   D+N+A LEV
Sbjct: 73  TNQAEEIEVLIDMLAEDPGDVDTATELADSIAQAQKDVEAYNLEQLLTEPYDANNAILEV 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H G+GGTES DW   L RMYTRWA++  F+ + L+ H G+EAGI SAT+ I G NA+G+L
Sbjct: 133 HPGSGGTESTDWGANLYRMYTRWAQQHGFQVDVLDYHAGDEAGIDSATIKITGHNAFGFL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E+GVHR VRISP+DS  RRHTSF S+ V P +DD+IE+E+ + D ++D +R+ GAGGQ
Sbjct: 193 RSEKGVHRFVRISPFDSAGRRHTSFVSVDVMPELDDTIEVEVRDDDIKMDVFRSGGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN   + VR+TH PTG+VV    ER+Q+ N+  A  +L++KLY+LEL+K+E        
Sbjct: 253 NVNKVSTGVRLTHEPTGIVVSSTVERTQYGNRDYAMKLLKSKLYQLELEKQEAERAALTG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K E GWG QIRSYVL PYQMVKD RTN E   P  VLDGDLD F+ A L  +
Sbjct: 313 EKMENGWGSQIRSYVLHPYQMVKDHRTNYETNQPQQVLDGDLDPFINAYLQWQ 365


>gi|49483011|ref|YP_040235.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|56749421|sp|Q6GIN7|RF2_STAAR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|49241140|emb|CAG39818.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MRSA252]
          Length = 369

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 163/353 (46%), Positives = 225/353 (63%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K ++ L  + G  D +N    +        +P+ W N  +A+ ++ +   L   ++  K 
Sbjct: 12  KYNQDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKT 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +Q  + D     +L  EE D  + ++    +   K +V+  + + LL G  D+N+A LE+
Sbjct: 72  LQAEVDDMDATWDLLQEEFDGEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILEL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWANML RMY R+ EK+ FK + ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 132 HPGAGGTESQDWANMLFRMYQRYCEKKGFKVKTVDYLPGDEAGIKSVTLLIKGHNAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGG 240
           K E+GVHRLVRISP+DS+ RRHTSF+S  V P   +D IEIEI+  D  +DT+RASGAGG
Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QH+N T+SA+RITH P+G+VV  Q ERSQ KN+  A  ML++KLY+L+L+++        
Sbjct: 252 QHINKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIR 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             + EIGWG QIRSYV  PY MVKD RTN E      V+DGD+  F+++ L  
Sbjct: 312 GEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLRQ 364


>gi|67461212|sp|Q927Y4|RF2_LISIN RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 366

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 174/351 (49%), Positives = 228/351 (64%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           ++Q+    G  D D+   R++ L  +  DP+ W +   A+ ++ E             ++
Sbjct: 14  AQQIKDFRGSLDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALE 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           +      I LEL  EE D  +  E   +++     +   + + +LS   D N+A LE+H 
Sbjct: 74  EEQESMEISLELLKEEADEDLQAELEKDIKAYVATISEFELKLMLSDPYDKNNAILELHP 133

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTESQDW +MLLRMY RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+LK 
Sbjct: 134 GAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKA 193

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+DS+ RRHTSF S+ V P +DD IEIE+   D +IDTYRA+GAGGQH+
Sbjct: 194 EKGVHRLVRISPFDSSGRRHTSFVSVDVMPELDDEIEIEVRTEDLKIDTYRATGAGGQHI 253

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVR+THIP+G+VV CQ ERSQ KN+ QA  ML+ KLY+ E +++E         +
Sbjct: 254 NTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQ 313

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            EIGWG QIRSYV  PY MVKD RTN E  +   V+DGDLDDF+ A L  +
Sbjct: 314 KEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 364


>gi|289577756|ref|YP_003476383.1| hypothetical protein Thit_0519 [Thermoanaerobacter italicus Ab9]
 gi|289527469|gb|ADD01821.1| hypothetical protein Thit_0519 [Thermoanaerobacter italicus Ab9]
          Length = 368

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 169/353 (47%), Positives = 234/353 (66%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+  ++  +G   D +   + +  ++ K  DP  W ++ +++ L + ++ L   +     
Sbjct: 11  KMFEEIKEMGVSLDIEGVKREVEEIDKKMADPDFWNDIKKSQELAKRQKELKELLEEYNS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  +  D   L+EL LEE D SI +E     + +K ++E  + ++LL+G  D N+A L +
Sbjct: 71  LVRKWEDLTTLIELGLEEGDESITEEVDKEYKELKKKLEDLKIKTLLNGPYDKNNAILSI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAG+GGTE+QDWA MLLRMYTRWA  + F  E L+   GEEAGIKS TL+IKGP AYG+L
Sbjct: 131 HAGSGGTEAQDWAEMLLRMYTRWANDKGFDVETLDYLQGEEAGIKSVTLMIKGPFAYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+  RRHTSF+ + V P ++D IE+EI   D RIDTYRASGAGGQ
Sbjct: 191 KSEAGVHRLVRISPFDAAGRRHTSFALVEVLPELEDDIEVEIRPEDLRIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN T+SAVRITH+PTG+VV CQ ERSQ +N+  A  ML+AKL +L +++++E     + 
Sbjct: 251 YVNKTESAVRITHLPTGIVVSCQNERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              E  WG QIRSYV QPY +VKD RTN E  +   V+DG++DDF+ A L  K
Sbjct: 311 EHKEAAWGNQIRSYVFQPYTLVKDHRTNFEVGNVQAVMDGEIDDFINAYLKQK 363


>gi|225847994|ref|YP_002728157.1| peptide chain release factor 2 [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225644274|gb|ACN99324.1| peptide chain release factor 2 [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 370

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 174/353 (49%), Positives = 241/353 (68%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++  + N L  +   +   + +  L+++  DP+ W +  +A+ +  +R +L   +  I +
Sbjct: 12  EIIEKWNNLKDILKPEKLQEEIKVLDSQMADPNFWNDPKKAQEISSKRNYLGEKLEEILK 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I  ++ D    ++L   E D S+  E    +  ++ E+E  +  SLLS E DS +A L +
Sbjct: 72  IDKKVKDLQDYIQLLEMEKDESLYTEVEKEINHLEKELERLEISSLLSDEMDSKNAILTL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GG E+ DW  ML+RMY RWAE + F+ E ++    + AGIKSAT++IKGP AYG+L
Sbjct: 132 QAGSGGVEACDWTQMLMRMYLRWAEGKGFQVEIVDYQPDDVAGIKSATIIIKGPFAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGEQGVHRLVRISP+D+N RRHTSF+++ V P +D+ I++EI+E D RIDT+RASGAGGQ
Sbjct: 192 KGEQGVHRLVRISPFDANKRRHTSFAAVSVIPEIDEEIKVEINEEDLRIDTFRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITHIPTG+VV CQ ERSQ +NK +A NML+AKLY+LELQK++E     E 
Sbjct: 252 HVNKTDSAVRITHIPTGIVVACQSERSQLQNKLKALNMLKAKLYQLELQKQKEKQKELEG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K +I WG QIRSYV QPYQMVKDLRT  E  +   V+DGD+D F+++ L  K
Sbjct: 312 EKKDITWGNQIRSYVFQPYQMVKDLRTGYEVGNVEAVMDGDIDGFIESYLKWK 364


>gi|292492472|ref|YP_003527911.1| hypothetical protein Nhal_2436 [Nitrosococcus halophilus Nc4]
 gi|291581067|gb|ADE15524.1| hypothetical protein Nhal_2436 [Nitrosococcus halophilus Nc4]
          Length = 365

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 180/350 (51%), Positives = 238/350 (68%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L  L G  D+    +RL  +  +   P +W     A+ L +ER  L   +  +  +
Sbjct: 14  LKGRLEALRGYLDFAAKQERLVEVERELAIPSVWNEPERAQRLGQERAQLQAVVGPLAAL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + +     L ELA+EE D    +E S  L+ ++  +E  +F+ + +GE D N+AYL++ 
Sbjct: 74  GEEIGQIKELFELAVEEGDEDTAREVSAELETMEQRLEKLEFQRMFAGEMDPNNAYLDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWANMLLRMY RW EK  FKTE  E+  GE AGIKSAT+  +G  A+GWL+
Sbjct: 134 AGSGGTEAQDWANMLLRMYLRWGEKHGFKTELTEVSAGEVAGIKSATIRFEGEYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSF+S++VYP VD+ I+IEI+ +D RIDTYRA+GAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGNRRHTSFASVFVYPEVDERIDIEINPADLRIDTYRAAGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVRITH+P+ +VVQCQ ERSQH+NKA     LRAKLYELE++KR+      E +
Sbjct: 254 VNRTDSAVRITHLPSNIVVQCQSERSQHQNKAHGMAQLRAKLYELEMRKRQAEKQAAEEA 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K +IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 314 KADIGWGSQIRSYVLD-QSRIKDLRTGVEMGNTQAVLDGDLDLFIEASLK 362


>gi|269797862|ref|YP_003311762.1| peptide chain release factor 2 [Veillonella parvula DSM 2008]
 gi|269094491|gb|ACZ24482.1| bacterial peptide chain release factor 2 (bRF- 2) [Veillonella
           parvula DSM 2008]
          Length = 368

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 171/352 (48%), Positives = 244/352 (69%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  +G  F+      R+  L+ +  DP  W N  +A+ + +E   L NA+   K++
Sbjct: 12  LEERIYGMGIHFNIAQKEDRIFTLDVQMSDPTFWDNPDKAREISQEATQLKNAVESYKQL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + D  ++LE+A++EDD S+  E  + +++I+  +E ++   LLSGE D+N+A L  H
Sbjct: 72  VSDIEDANVMLEMAIDEDDLSMESEIKEYVKQIEETLEKQEVLLLLSGEYDANNAILTFH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDW +ML+RMY RWAEK  F  E ++   G+EAGIKSAT L+KG NA+G+LK
Sbjct: 132 AGAGGTEAQDWCSMLIRMYLRWAEKSGFSIELMDEQPGDEAGIKSATFLVKGENAFGYLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+D+ +RRHTSF+++ V P +DD++EI I   D ++DTYRASGAGGQH
Sbjct: 192 SEKGVHRLVRISPFDAAARRHTSFAAVDVMPEIDDTVEINIDMKDVQVDTYRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVR+TH PTG+VVQCQ +RSQ +N+ QA  +LRAKL+ELEL+K+ E+      +
Sbjct: 252 INKTDSAVRMTHKPTGIVVQCQTQRSQMQNREQALRLLRAKLFELELEKQAELKEQIGGT 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              I WG QIRSYV  PY +VKD RT++E  +   V+DG+LD F++  L  +
Sbjct: 312 YQAIEWGSQIRSYVFHPYNLVKDHRTSVETGNVQAVMDGNLDPFIEGFLKKE 363


>gi|229541533|ref|ZP_04430593.1| peptide chain release factor 2 [Bacillus coagulans 36D1]
 gi|229325953|gb|EEN91628.1| peptide chain release factor 2 [Bacillus coagulans 36D1]
          Length = 327

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 166/324 (51%), Positives = 224/324 (69%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P+ W +  EA+ ++ E   L   ++  +E++ +  D  +  ELA EE+D  + +E  
Sbjct: 1   MLEPNFWDDQQEAQKIINESNALKEMVNGYRELESQQEDLEVTHELAKEENDSELKEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L+    ++   + + LL+G  D+N+A LE+H GAGGTESQDW +MLLRMYTRW EK+ 
Sbjct: 61  AELEAFTEKLNEYELQLLLNGPYDANNAILELHPGAGGTESQDWCSMLLRMYTRWGEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAG+KS TLL KG NAYG+LK E+G+HRLVRISP+D+  RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGVKSVTLLFKGHNAYGYLKAEKGIHRLVRISPFDAAGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+E+   D R+DTYRASGAGGQH+N T SAVRITHIPTG+VV CQ ERSQ
Sbjct: 181 EVMPEIDDNIEVEVRPEDLRVDTYRASGAGGQHINKTSSAVRITHIPTGIVVSCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+ QA  ML+AKLY+ E++++E+        + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 IQNREQAMKMLKAKLYQKEVEEKEKQLAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
           +E  +   V+DG++D F+ A L  
Sbjct: 301 VETGNVQAVMDGEIDPFIDAYLRA 324


>gi|297539161|ref|YP_003674930.1| peptide chain release factor 2 [Methylotenera sp. 301]
 gi|297258508|gb|ADI30353.1| peptide chain release factor 2 [Methylotenera sp. 301]
          Length = 351

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 174/346 (50%), Positives = 241/346 (69%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
             LGG+FD++   QRL  +N   EDP +W +  +++ L +E++ L+  +  ++ ++  L 
Sbjct: 5   TTLGGIFDFETKSQRLEEVNGLLEDPKVWDDNKKSQALGKEKRALELVVHSLQAVESSLN 64

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D+  L E+A EE+D   L     + Q ++ +V   +F  + SGE DSN+ ++E  +G+GG
Sbjct: 65  DSRELFEMAREENDDDTLLSVDVDSQAVEKQVAEMEFRRMFSGELDSNNCFIEFQSGSGG 124

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDWA MLLRMY R+ E++ FK E LE  DG+ AGIK A++ + G  AYG L+ E GV
Sbjct: 125 TEAQDWAAMLLRMYLRYCERKGFKVEVLEESDGDVAGIKGASIKVTGDYAYGTLRTENGV 184

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DSN++RHTSF+S+ ++P VDDSI+I+I+ +D RIDTYRASGAGGQH+N TD
Sbjct: 185 HRLVRKSPFDSNAKRHTSFASVQIFPEVDDSIQIDINPADLRIDTYRASGAGGQHINKTD 244

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PT  VVQCQ +RSQH+N+ +A NML+  LY LEL KR       E +KT+IG
Sbjct: 245 SAVRITHLPTNTVVQCQNDRSQHRNRDEAMNMLKGALYNLELNKRNADKQALEDAKTDIG 304

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSYVL     +KDLRTN+E  +   VLDGDLD F++ +L  
Sbjct: 305 WGHQIRSYVLD-QGRIKDLRTNVEIGNTQGVLDGDLDPFIQVSLKQ 349


>gi|254487153|ref|ZP_05100358.1| peptide chain release factor 2 [Roseobacter sp. GAI101]
 gi|214044022|gb|EEB84660.1| peptide chain release factor 2 [Roseobacter sp. GAI101]
          Length = 374

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 196/352 (55%), Positives = 250/352 (71%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++S+ L  L    + + A  RL   N + EDP+LW +   A+ LMRERQ L ++I+  + 
Sbjct: 11  QISKSLELLAQRLNVETAPYRLEEFNARVEDPNLWDDPDAAQKLMRERQALVDSIATYEG 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L D++ L+E+   E+D  ++ E    L+ +      K+ E+LL GEADSND +LE+
Sbjct: 71  IKQELADHVELIEMGEMENDAEVVAEAEAALKALAETAAQKELEALLDGEADSNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWAN+L RMY RWAEK+ +K E      GEEAGIKSAT  I G NAYGWL
Sbjct: 131 NAGAGGTESCDWANILARMYVRWAEKKGYKVELQSESAGEEAGIKSATYKISGLNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+IEI+++ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIEIDVNPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL +R    N    
Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRTN E +    VLDGDLD  M A LA+
Sbjct: 310 NKGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGLMGAALAL 361


>gi|237747768|ref|ZP_04578248.1| peptide chain release factor 2 [Oxalobacter formigenes OXCC13]
 gi|229379130|gb|EEO29221.1| peptide chain release factor 2 [Oxalobacter formigenes OXCC13]
          Length = 349

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 172/344 (50%), Positives = 239/344 (69%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+     +L  +N + EDP +W +  +A+ L +E++ L+N +  +  I+  L D 
Sbjct: 5   YGGIFDFAAKSDKLEQVNAELEDPDVWNDPKKAQDLGKEKKSLENVVLSLTRIKSGLDDA 64

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L E+A EE D   L+   D+   +  ++E  +F  + S   D  + ++++ AGAGGTE
Sbjct: 65  AELFEMAKEEQDDDTLKAVDDDTLELLDQIEKLEFRRMFSNPMDPCNCFIDIQAGAGGTE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA+M+LR Y R+ E++ F    LE  DGE AGIK+AT+ ++G  AYG+L+ E GVHR
Sbjct: 125 AQDWASMILRQYLRYCERKGFNATILEQSDGEVAGIKTATIKVEGDYAYGYLRTETGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS++ RHTSF S++VYP VDDSIEI+I+ +D R+DTYRASGAGGQH+N TDSA
Sbjct: 185 LVRKSPFDSSNGRHTSFCSLFVYPEVDDSIEIDINPADVRVDTYRASGAGGQHINKTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+TH PTG+VVQCQ +RSQH+N+A AW ML+++L+ELEL+KR       E SKT++GWG
Sbjct: 245 VRLTHAPTGIVVQCQNDRSQHRNRADAWEMLKSRLFELELRKRMSEQQKLEDSKTDVGWG 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSYVL     +KDLRTN E  +   VLDGDLDDF+  +L  
Sbjct: 305 HQIRSYVLD-NSRIKDLRTNHETGNTKAVLDGDLDDFILESLKQ 347


>gi|110680026|ref|YP_683033.1| peptide chain release factor 2 [Roseobacter denitrificans OCh 114]
 gi|123361814|sp|Q165J6|RF2_ROSDO RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|109456142|gb|ABG32347.1| peptide chain release factor 2 [Roseobacter denitrificans OCh 114]
          Length = 374

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 201/353 (56%), Positives = 254/353 (71%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + L+ L    D + A  RL   N + EDP LW +   A+ LMRERQ L +A++    
Sbjct: 11  KIQKSLDLLAQRLDVETAPYRLEEFNARVEDPTLWDDPDAAQKLMRERQMLVDAMATHDS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  + DN+ L+EL   EDD  ++ +  + L+ ++     K+ E+LL GEADSND +LEV
Sbjct: 71  IKQEMADNIELIELGEMEDDADVVSDAENALRALEETAAKKELEALLDGEADSNDTFLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA+ML RMY RWAEK+ +K E   + DG+EAGIKSAT  I G NAYGWL
Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKKGYKVELQSMSDGDEAGIKSATYKITGLNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+I+IE++ +D RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIDIEVNPADIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY+LEL +R    N    
Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQLELDRRNAAINEAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +K + GWG QIRSYVLQPYQMVKDLRTN E +    VLDGDLD FM ATLA+ 
Sbjct: 310 NKGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGFMAATLALD 362


>gi|46908681|ref|YP_015070.1| peptide chain release factor 2 [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|67461157|sp|Q71WR9|RF2_LISMF RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|46881953|gb|AAT05247.1| peptide chain release factor 2, programmed frameshift [Listeria
           monocytogenes serotype 4b str. F2365]
          Length = 366

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 173/351 (49%), Positives = 229/351 (65%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           ++Q+    G  D D+   R++ L  +  DP+ W +   A+ ++ E             ++
Sbjct: 14  AQQIKDFRGSLDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALE 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           +      I LEL  EE D  + +E   +++     +   + + +LS   D N+A LE+H 
Sbjct: 74  EEQESMEISLELLKEEADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHP 133

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTESQDW +MLLRMY RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+LK 
Sbjct: 134 GAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKA 193

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+DS+ RRHTSF S+ V P +DD IEIE+   D +IDTYRA+GAGGQH+
Sbjct: 194 EKGVHRLVRISPFDSSGRRHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHI 253

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVR+THIP+G+VV CQ ERSQ KN+ QA  ML+ KLY+ E +++E         +
Sbjct: 254 NTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQ 313

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            EIGWG QIRSYV  PY MVKD RTN E  +   V+DGDLD+F+ A L  +
Sbjct: 314 KEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDEFINAYLRSR 364


>gi|115311854|sp|Q4L4H9|RF2_STAHJ RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 371

 Score =  279 bits (714), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 163/353 (46%), Positives = 227/353 (64%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +    L  + G  D++N    +        +P  W +  +A+ ++ +   L + ++   E
Sbjct: 12  EYRNNLAQIRGSLDFENKETNIQEYEEMMTEPDFWDDQNKAQDVIDKNNALKSVVNGYHE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +++ + D     EL  EE D  +  +   N+   K +V+  + + LL G  D+N+A LE+
Sbjct: 72  LEEEVEDMTATWELLQEELDGDVKSDLEQNVLDFKEKVDQFELQLLLDGPHDANNAILEL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA+MLLRMY R+ E++ FK E ++   G+EAG+KS TLLIKG NAYG+L
Sbjct: 132 HPGAGGTESQDWASMLLRMYQRYGEQQGFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGG 240
           K E+GVHRLVRISP+DS+ RRHTSF+S  V P   +D IEIEI+  D  +DT+RASGAGG
Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFASCDVIPEFNNDEIEIEINPDDITVDTFRASGAGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QH+N T+SA+RITH PTG+VV  Q ERSQ KN+  A  ML+AKLY+L+L+++E       
Sbjct: 252 QHINKTESAIRITHHPTGIVVNNQNERSQIKNREAAMKMLKAKLYQLKLEEQEREMAEIR 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             + EIGWG QIRSYV  PY MVKD RTN E      V+DG++  F+++ L  
Sbjct: 312 GEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGEIGPFIESYLRY 364


>gi|226941341|ref|YP_002796415.1| PrfB [Laribacter hongkongensis HLHK9]
 gi|226716268|gb|ACO75406.1| PrfB [Laribacter hongkongensis HLHK9]
          Length = 368

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 173/351 (49%), Positives = 242/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +   +    D+D    RL  ++   EDP +W++   A+ L RE++ L++ +  I  I
Sbjct: 17  LGSRTADIRQYLDYDGKKDRLEEVSRLVEDPTIWEDPKRAQELGREKKALEDVVLVIDSI 76

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D+  L ++   E+D   +    D+L  ++  +E  +F  + S   D N  ++++ 
Sbjct: 77  LSTLADSRELFDMGRAEEDDDTVLAVRDDLAGVETRLEMLEFRRMFSNPMDPNSCFVDIQ 136

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTE+QDWA+ML RMY R+ E++ FK E +E  +GE AGIKSATL ++G  AYG+L+
Sbjct: 137 SGAGGTEAQDWASMLERMYLRYCERKNFKVEVIEESEGEVAGIKSATLKVEGEYAYGFLR 196

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN+RR TSF+S++VYP VDDSIEI+I+ +D RIDTYRASGAGGQH
Sbjct: 197 TETGVHRLVRNSPFDSNNRRQTSFASVFVYPEVDDSIEIDINPADLRIDTYRASGAGGQH 256

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH+PT +VVQCQ +RSQHKN+A+A +ML+A+L+ELEL+KR E     E +
Sbjct: 257 INKTDSAVRITHLPTNIVVQCQNDRSQHKNRAEAMSMLKARLFELELRKRNEEKQALEDT 316

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KT++GWG QIRSYV      VKDLRT +E  +   V+DGDLD F++A+L  
Sbjct: 317 KTDVGWGHQIRSYVFD-QSRVKDLRTLVEVGNVKGVMDGDLDGFIEASLKQ 366


>gi|91205413|ref|YP_537768.1| peptide chain release factor 2 [Rickettsia bellii RML369-C]
 gi|122425715|sp|Q1RIY5|RF2_RICBR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|91068957|gb|ABE04679.1| Peptide chain release factor RF-2 [Rickettsia bellii RML369-C]
          Length = 368

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 192/352 (54%), Positives = 250/352 (71%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + L  L    D + +  RL+ L      P LW +   A+ L+RE+ +L+  +    +
Sbjct: 11  KIEQSLELLRRSLDVETSAARLAELEELAASPDLWNDQANAQKLLREKSNLEEQLGAYNK 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L D L L E+A  E+D  I+Q+   +LQ +       + E L SGEADSN+ +LE+
Sbjct: 71  IRSNLKDALELEEMAEAENDLEIMQQVEKDLQSLSTIAAKFETECLFSGEADSNNCFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA++++RMY R+AE+  FKTE + + +GEEAGIKS T+ I G  AYGWL
Sbjct: 131 NAGAGGTESHDWASIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGRRAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+++  +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQ
Sbjct: 191 KTEAGVHRLVRISPFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG V QCQ +RSQHKNKAQA  ML+AKLYELE+QKR +  N   +
Sbjct: 251 HVNTTDSAVRITHIPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +KT+  WG QIRSYVLQPYQMVKDLRT+ E +    VLDGDL++F+ A+LA+
Sbjct: 311 AKTDNSWGHQIRSYVLQPYQMVKDLRTDYETSDTKGVLDGDLEEFVSASLAM 362


>gi|149202750|ref|ZP_01879722.1| peptide chain release factor 2 [Roseovarius sp. TM1035]
 gi|149144032|gb|EDM32066.1| peptide chain release factor 2 [Roseovarius sp. TM1035]
          Length = 375

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 198/352 (56%), Positives = 248/352 (70%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L  L     W+ A  RL   N + EDP LW +   A+ LMRERQ L +A+     
Sbjct: 11  EIEKSLELLRQRLGWETARHRLEEFNARVEDPTLWDDPARAQTLMRERQALVDALETHDG 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I++ L DNL L+EL   E D  ++ E    ++ +      K+ E+LL GEADSND +LE+
Sbjct: 71  IKNELEDNLGLIELGEAESDAEVVGEAEAAIKALAKVAAAKELEALLDGEADSNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA+ML RMY RWAEKR +  E      G+EAGIKSA   I G NAYGWL
Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKRGYTVELQSESAGDEAGIKSAAYKISGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+IEIE++ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PTG+VV    ++SQH+N+  A   L+++LY+LEL +R    N    
Sbjct: 251 HVNTTDSAVRITHMPTGIVVTSS-QKSQHQNRDIAMKALKSRLYQLELDRRNAAINEAHD 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD+FM ATLA+
Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTGVETSDTKGVLDGDLDEFMAATLAM 361


>gi|327481446|gb|AEA84756.1| peptide chain release factor 2 [Pseudomonas stutzeri DSM 4166]
          Length = 370

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 185/346 (53%), Positives = 244/346 (70%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           +  GG+FD+D    RL  +N + EDP++W     A+ L RER  L   +  I ++   L 
Sbjct: 24  SQFGGIFDYDQKHDRLVEVNRELEDPNVWNKPEYAQSLGRERATLAQIVETIDDLTGSLA 83

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D+  LLE+A EE+D   + +    ++R++  +E  +F  + S E D N+ YL++ AG+GG
Sbjct: 84  DSRDLLEMAAEENDEGAVNDIVAEVERLREILEKLEFRRMFSHEMDPNNCYLDIQAGSGG 143

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDWAN+LLRMY RWA+KR F  E +E+ +GE AGIK AT+ IKG  A+GWL+ E GV
Sbjct: 144 TEAQDWANILLRMYLRWADKRGFSAEIVELSEGEVAGIKGATVHIKGEYAFGWLRTEIGV 203

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ +D RIDTYR+SGAGGQHVNTTD
Sbjct: 204 HRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTD 263

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QKR   +   E SK++IG
Sbjct: 264 SAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDSKSDIG 323

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSYVL     +KDLRT +E++    VLDGDLD +++A+L  
Sbjct: 324 WGHQIRSYVLDD-SRIKDLRTGVERSDCQKVLDGDLDGYLEASLKQ 368


>gi|116617317|ref|YP_817688.1| peptide chain release factor 2 [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122272482|sp|Q03ZQ7|RF2_LEUMM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|116096164|gb|ABJ61315.1| bacterial peptide chain release factor 2 (bRF-2) [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
          Length = 372

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 150/353 (42%), Positives = 219/353 (62%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +   +    G  D +   + ++    +  +P  W +  +A+ ++ E   L N       +
Sbjct: 13  MQENIERFRGTLDMEALTEEIADYENRMTEPDFWNDNEKAQKVIEENNVLKNRRDSFLNL 72

Query: 63  QDRLCDNLILLEL-ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            +++ +  +L+E+   + +D   L E    + + + +++    E LL+   D+N+A LE+
Sbjct: 73  TNQVEELELLIEMAVEDPEDEDTLGELEAGVAKAQKDIDAYNLEQLLTEPYDANNAILEI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H G+GGTES DW   L RMYTRWA++  F+ E L+ H G+EAGI SAT+ + G NAYG+L
Sbjct: 133 HPGSGGTESTDWGANLYRMYTRWAQQHDFQVETLDYHAGDEAGIDSATIKVTGHNAYGFL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E+GVHR VRISP+DS  RRHTSF S+ V P +DDSIE+E+ + D ++D +R+ GAGGQ
Sbjct: 193 RSEKGVHRFVRISPFDSAGRRHTSFVSVDVMPELDDSIEVEVRDDDVKMDVFRSGGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN   + VR+TH PTG+VV    ER+Q+ N+  A  +L++KLY+LEL+K+E        
Sbjct: 253 NVNKVSTGVRLTHEPTGIVVSSTVERTQYGNRDYAMRLLKSKLYQLELEKKEAERAALTG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K E GWG QIRSYVL PYQMVKD RTN E   P  VLDGDLD F+ A L  +
Sbjct: 313 EKMENGWGSQIRSYVLHPYQMVKDHRTNYETNQPQAVLDGDLDPFINAYLQWQ 365


>gi|67459393|ref|YP_247017.1| peptide chain release factor 2 [Rickettsia felis URRWXCal2]
 gi|75536187|sp|Q4UKS1|RF2_RICFE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|67004926|gb|AAY61852.1| Peptide chain release factor RF-2 [Rickettsia felis URRWXCal2]
          Length = 368

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 188/352 (53%), Positives = 250/352 (71%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + L  L    D +++ +RL+ L   T DP LW +   A+ L+RE+ +L+  ++   +
Sbjct: 11  KIEQSLELLWRSLDVESSTERLNELEELTSDPSLWNDQANAQTLLREKSNLEEKLNAFNK 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D L L E+A  E+D   L +   +L+ + +     + E L SGEAD N+ +LE+
Sbjct: 71  LKSNLKDTLELEEMAEAENDLETLSQIEQDLKNLSVIAAKFETECLFSGEADGNNCFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DW ++++RMY R+AE+  FKTE + + +GEEAGIKS T+ I G  AYGW 
Sbjct: 131 NAGAGGTESHDWVSIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWF 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+++  +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQ
Sbjct: 191 KTEAGVHRLVRISPFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPT  V QCQ +RSQHKNKAQA  ML+AKLYELE+QKR +  N   +
Sbjct: 251 HVNTTDSAVRITHIPTNTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +KT+  WG QIRSYVLQPYQMVKDLRT+ E +    VLDGDL+DF+ A+LA+
Sbjct: 311 AKTDNSWGHQIRSYVLQPYQMVKDLRTDYETSDTKGVLDGDLEDFVSASLAM 362


>gi|85702878|ref|ZP_01033982.1| peptide chain release factor 2 [Roseovarius sp. 217]
 gi|85671806|gb|EAQ26663.1| peptide chain release factor 2 [Roseovarius sp. 217]
          Length = 375

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 198/352 (56%), Positives = 247/352 (70%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L  L     W+ A  RL   N + EDP LW +   A+ LMRERQ L +A+     
Sbjct: 11  EIEKSLELLRQRLGWETARHRLEEFNARVEDPTLWDDPARAQSLMRERQALVDALDTHDS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L DNL L+EL   E+D  ++ E    ++ +      K+ E+LL GEADSND +LE+
Sbjct: 71  LKQELEDNLGLIELGEMENDTEVVSEAEAAIKALAKVAAAKELEALLDGEADSNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA+ML RMY RWAEKR +  E      GEEAGIKSA   I G NAYGWL
Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKRGYTVELQSESAGEEAGIKSAAYKISGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+IEIE++ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG+VV    ++SQH+N+  A   L+++LY+ EL +R    N    
Sbjct: 251 HVNTTDSAVRITHIPTGIVVTSS-QKSQHQNRDIAMKALKSRLYQQELDRRNAAINEAHD 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD+FM ATLA+
Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTGVETSDTKGVLDGDLDEFMAATLAM 361


>gi|262283020|ref|ZP_06060787.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Streptococcus
           sp. 2_1_36FAA]
 gi|262261272|gb|EEY79971.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Streptococcus
           sp. 2_1_36FAA]
          Length = 347

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 159/344 (46%), Positives = 221/344 (64%), Gaps = 2/344 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GGLFD +   + ++ L  K  +P  W + I A+   +E   L        ++ D   ++ 
Sbjct: 4   GGLFDLEGLEEEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTDLFDESE 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           ILL+     +D S+ +E  + L  ++  +   +   LLS   D+N+A LE+H G+GGTE+
Sbjct: 64  ILLDF--LAEDDSVQEELEEKLAELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEA 121

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDW +MLLRMYTR+   + FK E L+   G+EAGIKS TL  +GP+AYG LK E GVHRL
Sbjct: 122 QDWGDMLLRMYTRFGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRL 181

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+DS  RRHTSF+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + V
Sbjct: 182 VRISPFDSAKRRHTSFTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGV 241

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+THIPTG+VVQ   +R+Q+ N+ +A  ML+AKLY+LE +K+    +  +  K EI WG 
Sbjct: 242 RLTHIPTGIVVQSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEISWGS 301

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           QIRSYV  PY MVKD RT+ E      V+DGDLD F+ A L  +
Sbjct: 302 QIRSYVFTPYTMVKDHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 345


>gi|49485626|ref|YP_042847.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57650094|ref|YP_185692.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           COL]
 gi|150393263|ref|YP_001315938.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           JH1]
 gi|56749392|sp|Q6GB76|RF2_STAAS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|56749443|sp|Q7A6R4|RF2_STAAN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|56749454|sp|Q99VM1|RF2_STAAM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|71153100|sp|Q5HHR5|RF2_STAAC RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|115311853|sp|Q2YSH5|RF2_STAAB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|189040005|sp|A6TZN3|RF2_STAA2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|49244069|emb|CAG42495.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57284280|gb|AAW36374.1| peptide chain release factor 2, programmed frameshift
           [Staphylococcus aureus subsp. aureus COL]
 gi|149945715|gb|ABR51651.1| hypothetical protein SaurJH1_0795 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|269940331|emb|CBI48708.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           TW20]
          Length = 369

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 164/353 (46%), Positives = 225/353 (63%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K ++ L  + G  D +N    +        +P+ W N  +A+ ++ +   L   ++  K 
Sbjct: 12  KYNQDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKT 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +Q  + D     +L  EE D  + ++    +   K +V+  + + LL G  D+N+A LE+
Sbjct: 72  LQAEVDDMDATWDLLQEEFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILEL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWANML RMY R+ EK+ FK E ++   G+EAGIKS TLLIKG NAYG+L
Sbjct: 132 HPGAGGTESQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGG 240
           K E+GVHRLVRISP+DS+ RRHTSF+S  V P   +D IEIEI+  D  +DT+RASGAGG
Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QH+N T+SA+RITH P+G+VV  Q ERSQ KN+  A  ML++KLY+L+L+++        
Sbjct: 252 QHINKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIR 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             + EIGWG QIRSYV  PY MVKD RTN E      V+DGD+  F+++ L  
Sbjct: 312 GEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLRQ 364


>gi|171463253|ref|YP_001797366.1| peptide chain release factor 2 [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171192791|gb|ACB43752.1| peptide chain release factor 2 [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 349

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 169/346 (48%), Positives = 244/346 (70%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD+D   +RL+ +N+  EDP +W +  +A+ L +E++ LD  ++ + ++   + 
Sbjct: 3   KLFGGIFDFDVKSRRLTEINSILEDPTIWDDQKKAQALGKEKKLLDGIVATLTDLNTNIT 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             L L ++A EE D   +     +++     +   +F  +   E DS + ++++ AGAGG
Sbjct: 63  SALELFDMAKEESDFETIAAIEQDVEGYSKIIGDLEFRRMFHNEMDSCNCFIDIQAGAGG 122

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DWA+ML R Y ++ E++ +KTE LE  DG+ AGIKSAT+ + G  AYG L+ E GV
Sbjct: 123 TEACDWASMLYRQYLKYCERKGYKTEILEESDGDVAGIKSATIKVDGEYAYGHLRSETGV 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS++ RHTSF+SI+VYP +DDSIEIE++ +D R DTYRASGAGGQH+N TD
Sbjct: 183 HRLVRKSPFDSSNGRHTSFASIYVYPEIDDSIEIEVNPADIRTDTYRASGAGGQHINKTD 242

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+VVQCQ +RSQH+N+A+A  ML+++LYE E+QKR    +  E+SKT++G
Sbjct: 243 SAVRLTHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHEMQKRRAEQDKLEASKTDVG 302

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 303 WGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDAFIEASLKQ 347


>gi|323526607|ref|YP_004228760.1| peptide chain release factor 2 [Burkholderia sp. CCGE1001]
 gi|323383609|gb|ADX55700.1| Peptide chain release factor 2 [Burkholderia sp. CCGE1001]
          Length = 367

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 177/351 (50%), Positives = 248/351 (70%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +   L G  D+D+  +RL  +N + EDP +W +   A+ L RE++ LD+ +  +  +
Sbjct: 16  LRTRAADLRGYLDYDDKSRRLIEVNRELEDPDVWNDSKHAQALGREKKLLDDTVGKLTSL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L E+A EE D   L     + Q ++  V   +F  + +  AD N+A+L++ 
Sbjct: 76  HNDLRDAQDLFEMAREEGDDETLVACEADAQALEQRVADMEFRRMFANPADPNNAFLDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y R+ E++ FKTE LE  DG+ AGIK+AT+ I+G  AYG+L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+  RHTSFSS++VYP +DDSIE++I+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH+P+G+VVQCQ +RSQH+N+A+A  ML+++LYE E++KR+   +  E+ 
Sbjct: 256 INKTDSAVRITHMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F+ A+L  
Sbjct: 316 KTDVGWGHQIRSYVLD-NSRIKDLRTNVEISNTKSVLDGDLDPFISASLKQ 365


>gi|220929619|ref|YP_002506528.1| hypothetical protein Ccel_2206 [Clostridium cellulolyticum H10]
 gi|219999947|gb|ACL76548.1| hypothetical protein Ccel_2206 [Clostridium cellulolyticum H10]
          Length = 373

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 170/350 (48%), Positives = 234/350 (66%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +    D       ++ L  K  +P  W ++  ++ ++++ + L   I     I
Sbjct: 14  LKSNLEEMRASLDIARISDEIAELEHKASEPEFWNDMENSQKILQKTKILKTKIERFNNI 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D   L EL LEE D S++ E  + L ++K  +E  + E+LL+G  D N+A L +H
Sbjct: 74  TSQWEDLFTLAELGLEEQDESVIPEVGEGLVQLKNNLESLRLETLLTGPYDKNNAILTLH 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDW  MLLRM+TRW E + ++ + L+  DG+EAGIKS T+ + G NAYG+LK
Sbjct: 134 AGAGGTEAQDWVQMLLRMFTRWGEAKGYEVKILDYLDGDEAGIKSVTIHVIGENAYGYLK 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DS+ RRHTSF+S+ V P +DD+IEI I+  D RIDTYRASGAGGQH
Sbjct: 194 SEKGVHRLVRISPFDSSGRRHTSFASLDVMPELDDTIEININPDDLRIDTYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSA+RITHIPTGVVV CQ ERSQ +NK  A  ML+AKL+EL+ ++++E     +  
Sbjct: 254 INKTDSAIRITHIPTGVVVSCQTERSQFQNKDTAMKMLKAKLFELKEREQKEKIEDLKGV 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           + +I WG QIRSYV  PY +VKD RTN E+ +   V+DG+LD F+ A L+
Sbjct: 314 QMDIAWGSQIRSYVFCPYTLVKDHRTNYEEGNVDAVMDGELDGFINAYLS 363


>gi|259046384|ref|ZP_05736785.1| peptide chain release factor 2 [Granulicatella adiacens ATCC 49175]
 gi|259036929|gb|EEW38184.1| peptide chain release factor 2 [Granulicatella adiacens ATCC 49175]
          Length = 361

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 161/349 (46%), Positives = 227/349 (65%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
            +L+ +GGLFD D   + ++    +  +P  W +  +A  ++++   L +      +++ 
Sbjct: 2   SKLSAIGGLFDLDRLEEDIAAYEQEMSEPSFWDDSEKANQVIQKNNELKSIYDTFHKMEL 61

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              +  +L E+  EE D  +  E  + +Q ++ +++  +   LL+G  D N A LE+H G
Sbjct: 62  AHEETSLLFEMYKEEPDEEVHAEIVEAIQSLEKDLQRYELSMLLNGPHDKNSAILEIHPG 121

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGGTESQDW +MLLRMY RWAEK  ++ E ++  DG+EAGIKS TL I+G NAYG+L+ E
Sbjct: 122 AGGTESQDWGSMLLRMYMRWAEKHGYRVETVDYQDGDEAGIKSVTLSIEGLNAYGYLRSE 181

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           +GVHRLVRISP+D+  +RHTSF S+ V P +D  I+IEI+  D ++D YRASGAGGQH+N
Sbjct: 182 KGVHRLVRISPFDAAGKRHTSFCSVDVVPQMDGDIDIEINPDDLKVDVYRASGAGGQHIN 241

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T SAVRITHIPTG+V Q Q +RSQ KN+ QA  ML+AKL++LE +K+          + 
Sbjct: 242 KTSSAVRITHIPTGIVTQSQAQRSQFKNRDQAMAMLKAKLFQLEEEKKAAELAAIRGEQK 301

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +I WG QIR+YV  PY MVKDLR+  E  +   V+DGDLD FM A L  
Sbjct: 302 DIAWGSQIRNYVFHPYSMVKDLRSGYETGNIGAVMDGDLDSFMDAYLKW 350


>gi|217970376|ref|YP_002355610.1| peptide chain release factor 2 [Thauera sp. MZ1T]
 gi|217507703|gb|ACK54714.1| conserved hypothetical protein [Thauera sp. MZ1T]
          Length = 367

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 180/351 (51%), Positives = 240/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +   L    D+D    +L  +N   EDP +W N   A+ L +E++ L++ +  +++I
Sbjct: 16  LAARGRELRRYLDYDVKASKLEEVNRALEDPAVWNNAERAQELGKEKRQLEDVVLTLQKI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D   L ELA  EDD    +    +L  ++  +E  +F  + S   D N+ ++E+ 
Sbjct: 76  DAQSRDLKDLFELAEAEDDDDTFEAVEADLVELQGAIEKLEFRRMFSNPMDPNNCFIEIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA ML RMY R+ EK+ F  E +E  +GE AGIK+ T+   G  AYG+L+
Sbjct: 136 AGAGGTEAQDWAGMLERMYLRYGEKKGFTVELMEETEGEVAGIKNCTIKFSGEYAYGYLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DSN+RRHTSF+S++VYP VDDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGIHRLVRKSPFDSNARRHTSFTSVFVYPEVDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQHKNKA+A +ML+A+LYE EL+KR+      E S
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHKNKAEAMSMLKARLYEAELRKRQSEQQKLEDS 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRTN E  +   VLDGDLDDF+ A+L  
Sbjct: 316 KSDIGWGHQIRSYVLD-QSRIKDLRTNYEVGNTQAVLDGDLDDFIGASLKQ 365


>gi|118090032|ref|YP_873927.1| peptide chain release factor 2 [Streptococcus pneumoniae TIGR4]
 gi|123517990|sp|Q2MGI2|RF2_STRPN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|85720582|gb|ABC75805.1| peptide chain release factor 2, programmed frameshift
           [Streptococcus pneumoniae TIGR4]
          Length = 364

 Score =  278 bits (712), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 154/351 (43%), Positives = 213/351 (60%), Gaps = 2/351 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +L    G  D +   + ++ L  K  +P  W + I A+   +E   L N  +   +++
Sbjct: 14  REKLASFRGSLDLEGLEEEIAILENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKME 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           +   +  ILL+   E++                  +   +   LLS   D N+A LE+H 
Sbjct: 74  ELQDEVEILLDFLAEDESVHDELVAQLAELD--KIMTSYEMTLLLSEPYDHNNAILEIHP 131

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTE+QDW +MLLRMYTR+   + FK E L+   G+EAGIKS TL  +GPNAYG LK 
Sbjct: 132 GSGGTEAQDWGDMLLRMYTRYGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKS 191

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVRISP+DS  RRHTSF+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+V
Sbjct: 192 EMGVHRLVRISPFDSAKRRHTSFTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNV 251

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N   + VR+THIPTG+VVQ   +R+Q+ N+ +A  ML+AKLY++E  K+    +  +  K
Sbjct: 252 NKVSTGVRLTHIPTGIVVQSTVDRTQYGNRDRAMKMLQAKLYQMEQDKKAAEVDSLKGEK 311

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            EI WG QIRSYV  PY MVKD RT+ E      V+DGDLD F+ A L  +
Sbjct: 312 KEITWGSQIRSYVFTPYTMVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWR 362


>gi|85708766|ref|ZP_01039832.1| protein chain release factor B [Erythrobacter sp. NAP1]
 gi|85690300|gb|EAQ30303.1| protein chain release factor B [Erythrobacter sp. NAP1]
          Length = 375

 Score =  278 bits (712), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 200/353 (56%), Positives = 264/353 (74%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   L  +    DW+ A++RL  LN + +DP LW +  EA+ + RE++ L++A++ + E
Sbjct: 11  RIEAALALVRQSLDWERALRRLDELNARVQDPTLWDDPKEAQKISREQKQLEDAVNTVNE 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I   + D +  +E+   E + SI+ +   +L+++    +  + ++LLSGEAD ND YLE+
Sbjct: 71  ISAEMGDAVEFIEMGEAEGEESIVNDGLKSLEKLAARADADKVQALLSGEADGNDTYLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA ML RMY RWAE+R FK E +E   G++AGIKSATLL+KG NAYG+ 
Sbjct: 131 HAGAGGTESQDWAEMLFRMYGRWAERRGFKVETVEYQAGDQAGIKSATLLLKGDNAYGYA 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS ++RHTSFSS+WVYPV+DD I+IEI+ +D +IDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSAAKRHTSFSSVWVYPVIDDDIDIEINPADLKIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV  Q +RSQHKN+A A NML+A+L+E E+ +RE  A+    
Sbjct: 251 HVNTTDSAVRITHQPTGIVVASQNDRSQHKNRATAMNMLKARLFEREMAEREAAASGEYQ 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K+EIGWG QIRSYVLQPYQMVKDLRT +  +SP  VLDGD+DD++ A LA +
Sbjct: 311 EKSEIGWGHQIRSYVLQPYQMVKDLRTGVTSSSPDRVLDGDIDDYISAALAQR 363


>gi|326316598|ref|YP_004234270.1| peptide chain release factor 2 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323373434|gb|ADX45703.1| Peptide chain release factor 2 [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 367

 Score =  278 bits (712), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 168/351 (47%), Positives = 236/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS++   L    D+D   +RL  +N   EDP +W +  +A+ L +E++ L   +  + ++
Sbjct: 16  LSQRTQELRRYLDFDAKFERLRTVNASLEDPSVWNDPKKAQELGKEQKSLSAVVVTLDKL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN  L E++ EE D + L        +++  +E  +F  + S EAD  + ++++ 
Sbjct: 76  TRELADNAELYEMSKEEGDEAGLLTIEAETAKLRPLIEELEFRRMFSNEADPLNCFVDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA MLLR Y ++AE++ FK    +   G+ AGIKSAT+ I+G  AYG L+
Sbjct: 136 AGAGGTEACDWAGMLLRQYLKYAERKGFKATVEDETPGDVAGIKSATIKIEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+  RHTSF+S++VYP +DDSIEI I+ +D R DT+RASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASLFVYPEIDDSIEININPADVRTDTFRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+ E++KR E     E +
Sbjct: 256 INKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKRMEEQQKLEDT 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 316 KTDVGWGHQIRSYVLD-NSRIKDLRTNVEVSATQKVLDGDLDVFIEASLKQ 365


>gi|126726324|ref|ZP_01742165.1| peptide chain release factor 2 [Rhodobacterales bacterium HTCC2150]
 gi|126704187|gb|EBA03279.1| peptide chain release factor 2 [Rhodobacterales bacterium HTCC2150]
          Length = 375

 Score =  278 bits (712), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 198/351 (56%), Positives = 250/351 (71%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +++ L  L    D++    RL   N  TEDP+LW +  +A+ LMR+RQ L +A +   ++
Sbjct: 12  INKSLALLRQRMDFETVPHRLEEFNALTEDPNLWNDPEKAQKLMRDRQLLLDAYNNYNKL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN+ L+EL   EDD  ++ E    L+ +      K+ E+LL+GEADSND +LE++
Sbjct: 72  AQDLADNVELIELGEMEDDEDVVAEAEAGLRSVVEIAAKKELEALLNGEADSNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTES DWANML RMY RWAE R +K E      GEEAGIKSA   I G NAYGWLK
Sbjct: 132 SGAGGTESCDWANMLARMYVRWAEARGYKVELQSETAGEEAGIKSAAYKISGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DS ++RHTSFSSIWVYPVVDD+I+IE++ +D RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPFDSAAKRHTSFSSIWVYPVVDDNIDIEVNPADIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL +R    N    +
Sbjct: 252 VNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHEN 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K + GWG QIRSYVLQPYQMVKDLRTN+E +    VLDGDLD FM ATLA+
Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTNVETSDTKGVLDGDLDQFMAATLAL 361


>gi|317121051|ref|YP_004101054.1| bacterial peptide chain release factor 2 (bRF-2) [Thermaerobacter
           marianensis DSM 12885]
 gi|315591031|gb|ADU50327.1| bacterial peptide chain release factor 2 (bRF-2) [Thermaerobacter
           marianensis DSM 12885]
          Length = 416

 Score =  278 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 158/352 (44%), Positives = 215/352 (61%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L  L    D     + +  +     DP  W     A+  +R+ + L   +   + +
Sbjct: 12  LRPRLEELRDDLDLAGKRREIERIEQAMTDPSFWDEPDRAQQQVRQLKVLKGPVEHYEAL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + +L D  +L ELA EE D S++ E  + + + +  +   + + LL+G  D  DA + +H
Sbjct: 72  ERQLDDLQVLAELAAEEADVSVIPELEEGIAKAEEGLRQLELDLLLNGPYDGYDAIVSLH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA ML RMYTRWAE   ++ E L++ +GEEAGIKS T  ++GPNAYG+L+
Sbjct: 132 PGAGGTESQDWAQMLWRMYTRWAEDHGYQVEVLDLLEGEEAGIKSVTFAVRGPNAYGYLR 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+  RRHTSF+S+ V P + DS EIEI   D RID +RA G GGQH
Sbjct: 192 SEHGVHRLVRISPFDAAGRRHTSFASVDVLPDLGDSPEIEIRPEDLRIDVFRAGGHGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRI H+PTG+V  CQ ERSQH N+  A  +L+A+L     ++R +        
Sbjct: 252 VNKTESAVRIVHLPTGIVATCQNERSQHANRETAMKILKARLARYYEEQRLKEIAALRGD 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             EI WG QIRSYV QPY +VKD RT +E  +   V+DG LD F+ A L  +
Sbjct: 312 VGEIAWGNQIRSYVFQPYTLVKDHRTGVEVGNVQAVMDGHLDPFINAYLRWE 363


>gi|227431353|ref|ZP_03913406.1| peptide chain release factor RF2 [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227352946|gb|EEJ43119.1| peptide chain release factor RF2 [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 372

 Score =  278 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 151/353 (42%), Positives = 218/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +   +    G  D +   + ++    +  +P  W +  +AK ++ E   L N       +
Sbjct: 13  MQENIERFRGTLDMEALTEEIADYENRMTEPDFWNDNEKAKKVIEENNVLKNRRDSFLNL 72

Query: 63  QDRLCDNLILLEL-ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            +++ +  +L+E+   + +D   L E    +   + +++    E LL+   D+N+A LE+
Sbjct: 73  TNQVEELELLIEMAVEDPEDEDTLGELEAGVANAQKDIDAYNLEQLLTEPYDANNAILEI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H G+GGTES DW   L RMYTRWA++  F+ E L+ H G+EAGI SAT+ + G NAYG+L
Sbjct: 133 HPGSGGTESTDWGANLYRMYTRWAQQHDFQVETLDYHAGDEAGIDSATIKVTGHNAYGFL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E+GVHR VRISP+DS  RRHTSF S+ V P +DDSIE+E+ + D ++D +R+ GAGGQ
Sbjct: 193 RSEKGVHRFVRISPFDSAGRRHTSFVSVDVMPELDDSIEVEVRDDDVKMDVFRSGGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN   + VR+TH PTG+VV    ER+Q+ N+  A  +L++KLY+LEL+K+E        
Sbjct: 253 NVNKVSTGVRLTHEPTGIVVSSTVERTQYGNRDYAMRLLKSKLYQLELEKKEAERAALTG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K E GWG QIRSYVL PYQMVKD RTN E   P  VLDGDLD F+ A L  +
Sbjct: 313 EKMENGWGSQIRSYVLHPYQMVKDHRTNYETNQPQAVLDGDLDPFINAYLQWQ 365


>gi|157149715|ref|YP_001450721.1| peptide chain release factor 2 [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|189040006|sp|A8AY61|RF2_STRGC RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|157074509|gb|ABV09192.1| peptide chain release factor 2 [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 364

 Score =  278 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 157/351 (44%), Positives = 220/351 (62%), Gaps = 2/351 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +L    G  D +   + ++ L  K  +P  W + I A+   +E   L        ++ 
Sbjct: 14  REKLASFRGSLDLEGLEEEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMT 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           D   ++ ILL+     +D S+ +E  + L  ++  +   +   LLS   D+N+A LE+H 
Sbjct: 74  DLFDESEILLDF--LAEDDSVQEELEEKLAELEKMMTSYEMTLLLSEPYDNNNAILEIHP 131

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTE+QDW +MLLRMYTR+   + FK E L+   G+EAGIKS TL  +GP+AYG LK 
Sbjct: 132 GSGGTEAQDWGDMLLRMYTRFGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKS 191

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVRISP+DS  RRHTSF+S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+V
Sbjct: 192 EMGVHRLVRISPFDSAKRRHTSFTSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNV 251

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N   + VR+THIPTG+VVQ   +R+Q+ N+ +A  ML+AKLY+LE +K+    +  +  K
Sbjct: 252 NKVSTGVRLTHIPTGIVVQSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDK 311

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            EI WG QIRSYV  PY MVKD RT+ E      V+DGDLD F+ A L  +
Sbjct: 312 KEISWGSQIRSYVFTPYTMVKDHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 362


>gi|307729220|ref|YP_003906444.1| hypothetical protein BC1003_1175 [Burkholderia sp. CCGE1003]
 gi|307583755|gb|ADN57153.1| hypothetical protein BC1003_1175 [Burkholderia sp. CCGE1003]
          Length = 367

 Score =  278 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 178/351 (50%), Positives = 249/351 (70%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +   L G  D+D+  +RL  +N + EDP +W +   A+ L RE++ LD+ +  +  +
Sbjct: 16  LRTRAADLRGYLDYDDKSRRLIEVNRELEDPDVWNDSKHAQALGREKKLLDDTVGKLTSL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L E+A EE D   L     + Q ++  V   +F  + +  AD N+A+L++ 
Sbjct: 76  DNDLRDTQDLFEMAREEGDDETLLACEADAQALEQRVADMEFRRMFANPADPNNAFLDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y R+ E++ FKTE LE  DG+ AGIK+AT+ I+G  AYG+L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+  RHTSFSS++VYP +DDSIE++I+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH+P+G+VVQCQ +RSQH+N+A+A  ML+++LYE E++KR+E  +  E+ 
Sbjct: 256 INKTDSAVRITHMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQEEQDKLEAG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F+ A+L  
Sbjct: 316 KTDVGWGHQIRSYVLD-NSRIKDLRTNVEISNTKSVLDGDLDPFISASLKQ 365


>gi|303257507|ref|ZP_07343519.1| peptide chain release factor 2 [Burkholderiales bacterium 1_1_47]
 gi|302859477|gb|EFL82556.1| peptide chain release factor 2 [Burkholderiales bacterium 1_1_47]
          Length = 348

 Score =  278 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 173/347 (49%), Positives = 243/347 (70%), Gaps = 1/347 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GG+FD+D   +RL  +N   EDP +W +   A+ L +E++ L++ +  IK +   L
Sbjct: 1   MKSCGGIFDYDQKERRLEEVNQALEDPSIWSDQERAQQLSKEKKRLEDVVLTIKHLTTGL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D L L E+A EEDD + L+    ++  +K EVE+ +F+ + + E D  + +LE+ AGAG
Sbjct: 61  SDALELFEMAKEEDDDASLEAVEADINNLKKEVEHLEFQRMFNQEHDEANCFLEIQAGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWA+ML RMY ++AE++ FK E +E  +G+ AGIK  T+ I G  AYGWL+ E G
Sbjct: 121 GTEAQDWASMLERMYIKFAERQSFKPEIVEETEGDVAGIKGCTIKITGDYAYGWLRTETG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVR SP+DSN+RRHTSF+S++V P VDDS EIE++ +D RIDT+RASGAGGQH+  T
Sbjct: 181 IHRLVRKSPFDSNARRHTSFASVFVVPEVDDSFEIEVNPADLRIDTFRASGAGGQHIQKT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPTG+V   Q  RSQH+NK +A  +L+++LYE EL+KR+      E +K++I
Sbjct: 241 DSAVRITHIPTGIVAVSQTSRSQHQNKEEAMTILKSRLYEAELRKRQATQQALEDNKSDI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            WG QIRSYVL     VKDLRTN+E  + + VLDG L+ F++A+L  
Sbjct: 301 SWGHQIRSYVLD-QSRVKDLRTNVETGNTTAVLDGALESFIEASLKQ 346


>gi|86136665|ref|ZP_01055244.1| peptide chain release factor 2 [Roseobacter sp. MED193]
 gi|85827539|gb|EAQ47735.1| peptide chain release factor 2 [Roseobacter sp. MED193]
          Length = 374

 Score =  278 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 197/352 (55%), Positives = 253/352 (71%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L  L    +W+ A  RL   N + EDP+LW +   A+ LMRERQ+L +AI   K 
Sbjct: 11  EIEKSLELLAQRLNWETAEYRLEEFNARVEDPNLWDDAEAAQKLMRERQNLVDAIDTYKG 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L DN+ L+EL   E+D  ++ +  + L+ +K+    K+ E+LL GEADSND +LE+
Sbjct: 71  IKQDLADNIELIELGEMEEDQEVITDAEEALKALKVSAAEKELEALLDGEADSNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTES DWA+ML RMY RWAEK+ +K E      GEEAGIKSA   I G NAYGWL
Sbjct: 131 NSGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGEEAGIKSAAYKISGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSF S+WVYPVVDD+IEI+++ +D RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFCSVWVYPVVDDNIEIDVNPADIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL +R    N    
Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRT+ E +    VLDGDLD FM ATLA+
Sbjct: 310 NKGDAGWGSQIRSYVLQPYQMVKDLRTSHETSDTKGVLDGDLDGFMAATLAL 361


>gi|301165910|emb|CBW25483.1| peptide chain release factor 2 [Bacteriovorax marinus SJ]
          Length = 358

 Score =  278 bits (711), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 175/347 (50%), Positives = 228/347 (65%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GG F+ +    RLS ++        W +   A  + +E+  L + +     +++  
Sbjct: 1   MKTYGGHFEVERKSARLSEISDMEAMEGFWDDSDNAAKVQKEKSVLSDVVETYTTLKELF 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            +  +L+E A  E+D     E  D   +   +    + + LLSGE D N+A + ++AGAG
Sbjct: 61  DEFEVLVEFANGEEDEDSALEAIDCYDKFLKQFNAAELKVLLSGEVDPNNAIVSINAGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTES DWA+ML RM  RWAE + FK + L++ DG+ AGIKSAT+ I G  AYG+LK E G
Sbjct: 121 GTESCDWASMLFRMINRWAESKAFKVQVLDVQDGDSAGIKSATMTISGNYAYGYLKSEIG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+DSN+RRHTSFSSI+V P +DD+IEIEI + D +ID YR+ GAGGQ VNTT
Sbjct: 181 VHRLVRISPFDSNARRHTSFSSIFVSPEIDDNIEIEILDKDLKIDVYRSGGAGGQSVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPT  VV CQ ERSQ +NK QA  +LR++LYELE++KR       E+SK EI
Sbjct: 241 DSAVRITHIPTNTVVTCQNERSQLQNKLQAMKVLRSRLYELEMEKRRAQEAETEASKQEI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           GWG QIRSYVL PY++VKD RT+ E  +   VLDGDLD FM A L  
Sbjct: 301 GWGAQIRSYVLHPYKLVKDTRTSFESGNAEKVLDGDLDGFMDAFLRW 347


>gi|320116558|ref|YP_004186717.1| peptide chain release factor 2 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|319929649|gb|ADV80334.1| Peptide chain release factor 2 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 368

 Score =  278 bits (711), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 165/350 (47%), Positives = 233/350 (66%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
            ++  +G   D ++  + +  ++ K  DP  W ++ +++ L ++++ L   +     +  
Sbjct: 14  EEVKEMGVSLDIESVKREIEEIDKKMSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVS 73

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
           +  D   L+EL LEE D SI  E     + +K ++E  + ++LL+G  D N+A L +HAG
Sbjct: 74  KWEDLSTLIELGLEEGDESITDEVDKEYKELKKKLEDLKIKTLLNGPYDKNNAILSIHAG 133

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           +GGTE+QDWA MLLRMYTRWA  + F+ E L+   GEEAGIKS TL+IKGP AYG+LK E
Sbjct: 134 SGGTEAQDWAEMLLRMYTRWANDKGFEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSE 193

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHRLVRISP+D+  RRHTSF+ + V P +++ IE+EI   D +IDTYRASGAGGQ+VN
Sbjct: 194 AGVHRLVRISPFDAAGRRHTSFALVEVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVN 253

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T+SAVRITH+PTG+VV CQ ERSQ +N+  A  ML+AKL +L +++++E     +    
Sbjct: 254 KTESAVRITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHR 313

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           E  WG QIRSYV QPY +VKD RTN E  +   V+DG++D F+ A L  K
Sbjct: 314 EAAWGNQIRSYVFQPYTLVKDHRTNYEVGNVQAVMDGEIDGFINAYLKQK 363


>gi|15604144|ref|NP_220659.1| peptide chain release factor 2 [Rickettsia prowazekii str. Madrid
           E]
 gi|6225944|sp|Q9ZDQ2|RF2_RICPR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|3860836|emb|CAA14736.1| PEPTIDE CHAIN RELEASE FACTOR 2 (prfB) [Rickettsia prowazekii]
          Length = 369

 Score =  278 bits (711), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 178/352 (50%), Positives = 246/352 (69%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + L+ +    D +    RL+ L   T DP+LW N   A+ L+RE+ +L+  ++   +
Sbjct: 11  KIEQSLDLIWRSLDIEALTVRLTELEELTADPNLWNNNANAQTLLREKNNLEEKLNVFNK 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L + L L  +A  E+D   L +   + +++ +     + E L SGE D N+ +LE+
Sbjct: 71  LKSNLKEILELEAMAEVENDLETLNQIEQDFKKLSIITAKFETECLFSGETDCNNCFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA++++RMY R+AE+  FKT+ + + +GEE GIKS T+ I G  AYGW 
Sbjct: 131 NAGAGGTESHDWASIMMRMYLRFAERLGFKTKIINMINGEEVGIKSCTIRIIGKRAYGWF 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+++  +R TSF+S W+YP +DD I I I + D RIDT+R+SGAGGQ
Sbjct: 191 KTESGVHRLVRISPFNAAGKRMTSFASSWIYPEIDDDIAITIEDKDLRIDTFRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPT  V QCQ +RSQHKNKAQA  ML+AKLY+LE+QKR E  +   +
Sbjct: 251 HVNTTDSAVRITHIPTNTVTQCQSDRSQHKNKAQAMKMLQAKLYKLEMQKRNENVDKQNA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +KT+  WG QIRSYVLQPYQ+VKDLRTN E +    VLDG+L+DF+ A+L++
Sbjct: 311 NKTDNSWGHQIRSYVLQPYQIVKDLRTNYETSDTKGVLDGNLEDFVSASLSM 362


>gi|15892291|ref|NP_360005.1| peptide chain release factor 2 [Rickettsia conorii str. Malish 7]
 gi|24638155|sp|Q92IQ2|RF2_RICCN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|15619432|gb|AAL02906.1| peptide chain release factor RF-2 [Rickettsia conorii str. Malish
           7]
          Length = 368

 Score =  278 bits (711), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 188/352 (53%), Positives = 249/352 (70%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + L  L    D + + +RL+ L   T DP LW +   A+ L+RE+ +L+  ++   +
Sbjct: 11  KIEQSLELLWRSLDVEASTERLNALEELTADPSLWNDQANAQKLLREKSNLEEKLNAFNK 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D L L E+A  E+D   L +   +L+ + +     + E L SGEAD N+ +LE+
Sbjct: 71  LKSNLKDALELEEMAEAENDLETLSQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA++++RMY R+AE+  FKTE + + +GEEAGIKS T+ I G  AYGW 
Sbjct: 131 NAGAGGTESHDWASIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWF 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+++  +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQ
Sbjct: 191 KTETGVHRLVRISPFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG V QCQ +RSQHKNKAQA  ML+AKLYELE+QKR +  N   +
Sbjct: 251 HVNTTDSAVRITHIPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +KT+  WG QIRSYVLQPY MVKDLRT+ E +    VLDGDL++F+ A LA+
Sbjct: 311 AKTDNSWGHQIRSYVLQPYHMVKDLRTDYETSDTKGVLDGDLEEFVSAHLAM 362


>gi|186476207|ref|YP_001857677.1| peptide chain release factor 2 [Burkholderia phymatum STM815]
 gi|184192666|gb|ACC70631.1| peptide chain release factor 2 [Burkholderia phymatum STM815]
          Length = 359

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 171/343 (49%), Positives = 248/343 (72%), Gaps = 1/343 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D    RL  +N + EDP++W +   A+ L +E++ L+  +  +  + + L D  
Sbjct: 16  GGIFDYDAKSVRLIEVNKELEDPNVWNDSQHAQALGKEKKLLEGVVDVLSSLDNDLRDTK 75

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L ++A EE+D   L    +++ ++   VE  +F  + S  AD N+A++++ AGAGGTE+
Sbjct: 76  DLFDMAREENDEDTLVACEEDVAKLTTRVEDMEFRRMFSNPADPNNAFIDIQAGAGGTEA 135

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA+MLLR Y R+ E++ FKTE LE  +G+ AGIKSAT+ ++G  AYG+L+ E G+HRL
Sbjct: 136 CDWASMLLRQYLRYCERKGFKTEVLEESEGDVAGIKSATIKVEGEYAYGFLRTETGIHRL 195

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS+  RHTSFSS++VYP +D+S EIE++ +D RIDTYRASGAGGQH+N TDSAV
Sbjct: 196 VRKSPFDSSGGRHTSFSSVFVYPEIDESFEIEVNPADLRIDTYRASGAGGQHINKTDSAV 255

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIP+G+VVQCQ +RSQH+N+A+A  ML+++LYE E++KR+   +  E+ K+++GWG 
Sbjct: 256 RITHIPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEMRKRQSEQDKLEAGKSDVGWGH 315

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QIRSYVL     +KDLRTN+E ++   VLDGDLD F+ A+L  
Sbjct: 316 QIRSYVLD-NSRIKDLRTNVEISNTKSVLDGDLDAFISASLKQ 357


>gi|57866389|ref|YP_188014.1| peptide chain release factor 2 [Staphylococcus epidermidis RP62A]
 gi|71153101|sp|Q8CPZ1|RF2_STAES RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|71153102|sp|Q5HQX5|RF2_STAEQ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|57637047|gb|AAW53835.1| peptide chain release factor 2 [Staphylococcus epidermidis RP62A]
          Length = 371

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 160/354 (45%), Positives = 228/354 (64%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +    LN + G  D +N    +        DP  W +  +A+ ++ +   L + ++   +
Sbjct: 12  EYQNHLNQIRGSLDLENKETNIQEYEEMMTDPDFWNDQTKAQDIIDKNNALKSIVNGYYQ 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + + + D     EL  EE D  +  E  + +Q+ + +++  + + LL G  D+N+A LE+
Sbjct: 72  LTNAVDDMSATRELLQEEYDEDMKIELEEEVQQFEEQIDQYELQLLLDGPHDANNAILEL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDW +MLLRMY R+ E+  FK E ++   G+EAG+KS TLLIKG NAYG+L
Sbjct: 132 HPGAGGTESQDWVSMLLRMYQRYCEQNGFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGG 240
           K E+GVHRLVRISP+DS+ RRHTSF+S  V P   +D IEIEI+  D  +DT+RASGAGG
Sbjct: 192 KAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QH+N T+SA+RITH PTG+VV  Q ERSQ KN+  A  ML++KLY+L+L+++E+      
Sbjct: 252 QHINKTESAIRITHHPTGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQEQEMAEIR 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             + +IGWG QIRSYV  PY M+KD RTN E      V+DG++  F++A L  +
Sbjct: 312 GEQKDIGWGSQIRSYVFHPYSMIKDHRTNEETGKVDAVMDGEIGPFIEAYLRKE 365


>gi|85712973|ref|ZP_01044012.1| Protein chain release factor B [Idiomarina baltica OS145]
 gi|85693211|gb|EAQ31170.1| Protein chain release factor B [Idiomarina baltica OS145]
          Length = 348

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 186/346 (53%), Positives = 244/346 (70%), Gaps = 1/346 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  LGG+FD+ +  +RL  +  + E P +W +  +A+ L +ER  L+  I  +  ++  L
Sbjct: 1   MRHLGGIFDYAHKKERLEEVTRELEQPEVWDDPPKAQSLGKERAALEQVIETLDNLEQGL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   L++LA+E +D +   E    L+ +  ++E  +F  + S + DS+D Y+++ +G+G
Sbjct: 61  EDIEGLVDLAVEAEDETTFDEAEQELKELLTQLEALEFRRMFSRDNDSSDCYVDIQSGSG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWANMLLRMY RWAE  +FKTE  E+ +GE AGIKSAT+ I G  AYGWL+ E G
Sbjct: 121 GTEAQDWANMLLRMYLRWAEAHEFKTEITELSEGEVAGIKSATVRIAGEYAYGWLRTETG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR SP+DS +RRHTSF+S+++YP VDD IEIEI+ SD RIDTYRASGAGGQHVN T
Sbjct: 181 VHRLVRKSPFDSGNRRHTSFASVFIYPEVDDDIEIEINPSDLRIDTYRASGAGGQHVNRT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH PTG+VVQCQ +RSQHKNK  A   L+AKLYELE+QK+ E     E SK +I
Sbjct: 241 DSAVRITHEPTGIVVQCQSDRSQHKNKDSAMKQLKAKLYELEIQKQNEDKQALEDSKADI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           GWG QIRSYVL     +KDLRT IE  +   VLDG LD F++A+L 
Sbjct: 301 GWGSQIRSYVLDD-ARIKDLRTGIENRNTQAVLDGALDPFIEASLK 345


>gi|225851497|ref|YP_002731731.1| peptide chain release factor 2 [Persephonella marina EX-H1]
 gi|225646418|gb|ACO04604.1| peptide chain release factor 2 [Persephonella marina EX-H1]
          Length = 370

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 168/353 (47%), Positives = 230/353 (65%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  + N +  + D ++    L  L+ +   P  W +  +A+ +  +R  + N I  I+ 
Sbjct: 11  QLENKFNNIKEILDPESLRGELFKLDQEMGRPDFWNDTKKAQEISSKRNAIANKIQEIES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ ++ D    +EL   E D     E    ++ +  E+   +  SLLS E D  +A + +
Sbjct: 71  VEKKINDIKEFIELLELEYDKETEDEIKREIEALDKEITKLETASLLSEEYDMKNAIVTL 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GG E+ DW  MLLRMY RWAEK  F  E ++    + AGIKSAT ++KGP AYG+L
Sbjct: 131 QAGSGGVEACDWTEMLLRMYLRWAEKNGFDVEMVDYQPDDVAGIKSATFIVKGPYAYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGEQGVHRLVRISP+D+N RRHTSFS++ V P + D +++EI E D RIDT+RASGAGGQ
Sbjct: 191 KGEQGVHRLVRISPFDANKRRHTSFSAVSVIPEIGDEVKVEIKEEDLRIDTFRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRI HIPTG+ V CQ ERSQ +N+A+A  ML+AKLY+ EL+K++E     E 
Sbjct: 251 HVNTTDSAVRIVHIPTGITVSCQSERSQIQNRAKALQMLKAKLYQYELEKQKEKQKELEG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K +I WG QIRSYV QPYQMVKDLRT  E  +   V+DGD+D F+++ L  +
Sbjct: 311 EKKDISWGSQIRSYVFQPYQMVKDLRTGYETGNIQAVMDGDIDPFIESYLKWR 363


>gi|7688054|emb|CAB89696.1| putative peptide release factor 2 [Xanthomonas campestris pv.
           campestris]
          Length = 374

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 179/351 (50%), Positives = 242/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ ++  L G  D+D   +RL  ++ + E P +W +   A+ L RER  L+  +  I ++
Sbjct: 14  LNDRVLSLRGYLDYDVKKERLEEVSRELESPDVWNDAERAQALGRERSMLEKTVIGIADV 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LL+LA  E D         +L + +  VE  +F+ + SG+ D  +A++++ 
Sbjct: 74  LAGLTDAGELLDLAESEQDEDTAVAVIADLDKYQAHVEKLEFQRMFSGQMDGANAFVDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA +LLRMY RWAE R +KTE +E+  GE AGIKSAT+ I+G  AYGWLK
Sbjct: 134 AGAGGTEAQDWAEILLRMYLRWAESRGWKTELMEVSGGEVAGIKSATIRIEGEYAYGWLK 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS++RRHTSF+S++V P VDD+IEI+I+ +D R D YR+SGAGGQH
Sbjct: 194 TEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT  VV CQ  RSQH+N+  A  ML AKLYELE+QKR    +  E++
Sbjct: 254 VNKTESAVRITHIPTNTVVACQTGRSQHQNRDNAMKMLAAKLYELEVQKRNVERDALEAT 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIR+YVL     +KDLRT IE++    VLDGDLD+F++A+L  
Sbjct: 314 KSDIGWGSQIRNYVLD-QSRIKDLRTGIERSDTQKVLDGDLDEFVEASLKA 363


>gi|302342486|ref|YP_003807015.1| LigA [Desulfarculus baarsii DSM 2075]
 gi|301639099|gb|ADK84421.1| LigA [Desulfarculus baarsii DSM 2075]
          Length = 371

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 174/353 (49%), Positives = 235/353 (66%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L ++L  +    D ++  +RL+ L+        W++   AK +MRER  L  ++  +  
Sbjct: 7   ELRQRLGVIQEYLDPESKTKRLAELDKIVGANDFWEDQNAAKAVMRERTDLAQSLEELDA 66

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   + D  +LLELA+EEDD S+  E       ++ ++   +   LL G  D   A L +
Sbjct: 67  LNRSMEDAEVLLELAVEEDDASLTAEIDQAHDALERQIGRLEAARLLGGPDDHRGAILAI 126

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGG ++QDWA ML R+Y R+AE++ F+   L+   G+EAG+KS T+ I GP AYG L
Sbjct: 127 NAGAGGADAQDWAQMLTRLYGRYAERQGFQVVELDFQAGDEAGVKSVTMEINGPRAYGLL 186

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE GVHRLVRISP+D++ RRHT+F+S++V P VDD IEIE+ ++D RIDTYRASGAGGQ
Sbjct: 187 KGESGVHRLVRISPFDASHRRHTAFASVYVSPQVDDDIEIEVKDADIRIDTYRASGAGGQ 246

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T SAVRITH PTGVVVQCQ E+SQH+NK  A  +LRA+LYELE+ KRE       +
Sbjct: 247 HVNKTSSAVRITHFPTGVVVQCQNEKSQHRNKDMAMKVLRARLYELEIHKREAEKREVHA 306

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           S  EI WG QIRSYVL PY++VKD RT +E  +   VLDG LDDF++  L  +
Sbjct: 307 SHQEIAWGSQIRSYVLAPYRLVKDHRTGVEVGNVDSVLDGQLDDFIQGYLLWR 359


>gi|325291337|ref|YP_004267518.1| bacterial peptide chain release factor 2 (bRF-2) [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324966738|gb|ADY57517.1| bacterial peptide chain release factor 2 (bRF-2) [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 371

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 162/351 (46%), Positives = 228/351 (64%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L  L    D      ++  L  +   P  W +   A+ +M+E     + ++   E+
Sbjct: 12  LVARLADLRVSLDVPAREVKIGQLEEELNRPDFWDDRSNAQKIMQELTGNKDKVALFGEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D  +L ++A+EEDD S+  E   ++ RI+ + +  + E LLSGE D N+A + +H
Sbjct: 72  KTETEDLEVLWQMAMEEDDSSLEDEIVKDIHRIRAQYDELELEILLSGEYDRNNAIITLH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTE+QDW  ML RMY RW E+R++K E L++  GEEAGIKS T  + G NA+G+ K
Sbjct: 132 SGAGGTEAQDWVQMLYRMYLRWGERRRYKVETLDLLPGEEAGIKSVTFSLAGENAFGYAK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DS+ RRHTSF+S+ V P V++ +EI I   D ++DTYR+ GAGGQH
Sbjct: 192 CEKGVHRLVRISPFDSSGRRHTSFASVDVIPEVNEDMEINIDSEDLKVDTYRSGGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVRITHIP+G++VQCQ ERSQ +N+A    +L+AKL EL+ +++EE        
Sbjct: 252 VNKTDSAVRITHIPSGIIVQCQSERSQIQNRAYCMRILQAKLLELKRKQQEEELLEIRGE 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             +I WG QIRSYV  PY MVKD RTN E  + + V+DG++D F+ A L  
Sbjct: 312 LNDIAWGSQIRSYVFHPYSMVKDHRTNTETGNVNSVMDGEIDLFISAYLKQ 362


>gi|188997267|ref|YP_001931518.1| peptide chain release factor 2 [Sulfurihydrogenibium sp. YO3AOP1]
 gi|229576671|sp|B2V5M0|RF2_SULSY RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|188932334|gb|ACD66964.1| peptide chain release factor 2 [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 369

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 178/353 (50%), Positives = 240/353 (67%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++  + + L  +   +   + +  L+    DP+ W +  +A+ +   R +L   +  I  
Sbjct: 12  EIKEKWDNLKEILKPEKLEEEIKQLDDLMADPNFWNDTKKAQEISSRRNYLGEKLEEILT 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  ++ + L  + L   E+D  +  E    L+ I+ E+   +  SLLS E DS +A L V
Sbjct: 72  VDKKVNNLLDYITLLEMEEDQELYNEVEKELKEIEKEISRLELGSLLSDEMDSKNAILTV 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GG E+ DW  MLLRMYTRWAEKR ++ E ++    + AG+KSATL+IKGP AYG+L
Sbjct: 132 QAGSGGVEACDWTEMLLRMYTRWAEKRGYQVELVDFQPDDVAGVKSATLIIKGPYAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGEQGVHRLVRISP+D+N RRHTSFS++ V P +D+ I++EI+E D RIDTYRASGAGGQ
Sbjct: 192 KGEQGVHRLVRISPFDANKRRHTSFSAVSVIPEIDEDIKVEINEEDLRIDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITHIPTG+VV CQ ERSQ +NK +A NML+AKLY+LEL+KR+E     E 
Sbjct: 252 HVNKTDSAVRITHIPTGIVVACQSERSQLQNKLKATNMLKAKLYQLELEKRKEKQKELEG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K +I WG QIRSYV QPYQMVKDLRT  E  +   V+DG++DDF+++ L  K
Sbjct: 312 EKKDITWGSQIRSYVFQPYQMVKDLRTGFETGNIEAVMDGEIDDFIESYLKWK 364


>gi|237745578|ref|ZP_04576058.1| peptide chain release factor 2 [Oxalobacter formigenes HOxBLS]
 gi|229376929|gb|EEO27020.1| peptide chain release factor 2 [Oxalobacter formigenes HOxBLS]
          Length = 349

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 173/344 (50%), Positives = 239/344 (69%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD+     +L  +N + EDP +W +  +A+ L RE++ L+N +  +  I+  L D 
Sbjct: 5   YGGIFDFAAKSDKLEQVNAELEDPAVWNDPKKAQELGREKKSLENVVLSLSHIKSALTDA 64

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L E+A EE D   L+    ++  ++  +E  +F  + S   D  + ++++ AGAGGTE
Sbjct: 65  GELFEMAKEEQDDETLKAVEADVSELQDRIEKLEFRRMFSNPMDPCNCFVDIQAGAGGTE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA+M+LR Y R+ E++ F    LE  DGE AGIK+AT+ ++G  AYG+L+ E GVHR
Sbjct: 125 AQDWASMILRQYLRYCERKGFNATILEQSDGEIAGIKTATIKVEGDYAYGYLRTETGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS + RHTSF S++VYP VDDSIEI+I+ +D R+DTYRASGAGGQH+N TDSA
Sbjct: 185 LVRKSPFDSANGRHTSFCSLFVYPEVDDSIEIDINPADVRVDTYRASGAGGQHINKTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+THIPTG+VVQCQ +RSQH+N+A AW ML+++LYELEL+KR       E SKT++GWG
Sbjct: 245 VRLTHIPTGIVVQCQNDRSQHRNRADAWEMLKSRLYELELRKRMAEQQKLEDSKTDVGWG 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSYVL     +KDLRT+ E  +   VLDGDLDDF+  +L  
Sbjct: 305 HQIRSYVLD-SSRIKDLRTSHETGNTKAVLDGDLDDFIIESLKQ 347


>gi|313201599|ref|YP_004040257.1| peptide chain release factor 1 [Methylovorus sp. MP688]
 gi|312440915|gb|ADQ85021.1| peptide chain release factor 1 [Methylovorus sp. MP688]
          Length = 347

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 176/344 (51%), Positives = 245/344 (71%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD++   QRL  ++   EDP +W +   ++ L +ER+ L+  +  + E+ + L D+
Sbjct: 3   FGGIFDFETKQQRLEEVSQLLEDPSIWNDNERSQKLGKERRELEFVVKSLTEVDNSLRDS 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L E+A EE+D + L     + + ++ +VE  +F  + +   D N+ ++++ +G+GGTE
Sbjct: 63  AELFEMAREENDDATLLGIDADSKALEKQVEEMEFRRMFANPMDGNNCFIDIQSGSGGTE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA+MLLRMY R+ E+R FK E LE  +G+ AG+KSA+L I G  AYG+L+ E GVHR
Sbjct: 123 AQDWASMLLRMYLRYCERRGFKVEVLEESEGDVAGLKSASLKISGDYAYGYLRTESGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS +RRHTSF+S+ V+P VDDSIE+EI+ +D RIDTYRASGAGGQH+N TDSA
Sbjct: 183 LVRKSPFDSGNRRHTSFASVSVFPEVDDSIEVEINPADLRIDTYRASGAGGQHINKTDSA 242

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT  VVQCQ +RSQH+NKA+A NML+A+LY+LEL KR +     E +KT+IGWG
Sbjct: 243 VRITHLPTNTVVQCQNDRSQHRNKAEAMNMLKAQLYQLELNKRNQEKQALEDAKTDIGWG 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSYVL     +KDLRTN+E  +   VLDGDLD F+  +L  
Sbjct: 303 HQIRSYVLD-QSRIKDLRTNVEIGNTQGVLDGDLDPFISESLKQ 345


>gi|159043721|ref|YP_001532515.1| peptide chain release factor 2 [Dinoroseobacter shibae DFL 12]
 gi|157911481|gb|ABV92914.1| peptide chain release factor 2 [Dinoroseobacter shibae DFL 12]
          Length = 375

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 192/352 (54%), Positives = 246/352 (69%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L+ L    D++ A  RL   +   EDP+LW +   A+ LMR+RQ L +A+   + I
Sbjct: 12  IRKSLDLLAQRLDYETAPHRLEEFDAMIEDPNLWNDQARAQKLMRDRQMLVDAMKTYEGI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L DN+ L+EL   E D  ++ +  + L+ +      K+ E+LL GEAD ND +LE++
Sbjct: 72  KQELEDNIELIELGEMEADAEVVTDAEEALKSLAETAAKKEIEALLDGEADGNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTES DWA+ML RMY RWAE + +  E      GEEAGIKSA   I GPNAYGWLK
Sbjct: 132 SGAGGTESCDWASMLARMYVRWAEAKGYTVELQSQSPGEEAGIKSAAYKISGPNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIE++ +D RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEVNPADIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+V     E+SQH+N+  A   L+++LY++EL +R    N    +
Sbjct: 252 VNTTDSAVRITHVPTGIVTTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHEA 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K + GWG QIRSYVLQPYQMVKDLRT  E +  + VLDGDLD  M ATLA +
Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTGYETSDTAGVLDGDLDGLMSATLAQQ 362


>gi|295707157|ref|YP_003600232.1| peptide chain release factor 2 [Bacillus megaterium DSM 319]
 gi|294804816|gb|ADF41882.1| peptide chain release factor 2 [Bacillus megaterium DSM 319]
          Length = 326

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 169/323 (52%), Positives = 219/323 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP+ W +   A+ ++ E   L +A++    + +   +  +  EL  EE D  + +E  
Sbjct: 1   MSDPNFWNDQQAAQTVINEANGLKDAVNQFNHLDETYENLQVSYELVKEEYDEDLAEELV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L+ +   +   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEK+ 
Sbjct: 61  SELKELISGMNDFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + P  +D I I+I   D ++DTYRASGAGGQH+NTTDSAVRITH+PT VVV CQ ERSQ
Sbjct: 181 DIMPEFNDEISIDIRTEDLKVDTYRASGAGGQHINTTDSAVRITHLPTNVVVSCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML++KLY+LE++K++E        + +IGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNREQAMKMLKSKLYQLEIEKQQEQLAEIRGEQKDIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E  +   V+DGDLD F+ A L 
Sbjct: 301 TEVGNTQSVMDGDLDPFIDAYLR 323


>gi|145589652|ref|YP_001156249.1| peptide chain release factor 2 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145048058|gb|ABP34685.1| bacterial peptide chain release factor 2 (bRF-2) [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 349

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 167/346 (48%), Positives = 244/346 (70%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD+D   +RL+ +N+  EDP +W +  +A+ L +E++ LD  ++ + ++   + 
Sbjct: 3   KHFGGIFDFDVKSRRLTEVNSILEDPTIWDDQKKAQALGKEKKLLDGVVATLTDLNTNIT 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             + L ++A EE D   +     ++Q     +   +F  +   E DS + ++++ AGAGG
Sbjct: 63  GAIELFDMAKEESDFETIAAIEQDVQSYSKLIGDLEFRRMFHNEMDSCNCFIDIQAGAGG 122

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DWA+ML R Y ++ E++ +KTE LE  DG+ AGIKSAT+ + G  AYG L+ E GV
Sbjct: 123 TEACDWASMLYRQYLKYCERKGYKTEILEESDGDVAGIKSATIKVDGEYAYGHLRSETGV 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS++ RHTSF+SI+VYP +DDSIEI+++ +D R DTYRASGAGGQH+N TD
Sbjct: 183 HRLVRKSPFDSSNGRHTSFASIYVYPEIDDSIEIDVNPADIRTDTYRASGAGGQHINKTD 242

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE E+QKR    +  E+SKT++G
Sbjct: 243 SAVRLTHLPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHEMQKRRAEQDKLEASKTDVG 302

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 303 WGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDAFIEASLKQ 347


>gi|163784774|ref|ZP_02179571.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879956|gb|EDP73663.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 348

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 169/340 (49%), Positives = 232/340 (68%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           + ++  Q+L  L+     P  W +  +A+ +  ER +L + +  +  I++++      +E
Sbjct: 2   NLEDIKQKLKELDEIMSSPDFWNDQKKAQKISAERTYLSDKLEKLNNIEEKINYLEEYIE 61

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           L   E D    Q+  + ++ ++  +   + ESLLSGE DS +A + V AG+GG E+ DWA
Sbjct: 62  LLELEPDEEAKQDLENEIKNLETLINKFEVESLLSGEYDSKNAIVSVQAGSGGVEACDWA 121

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            MLLRMY RWAEK  +  E ++    + AGIKSAT ++KGP AYG+L+GEQGVHRLVRIS
Sbjct: 122 EMLLRMYLRWAEKNGYNVEIVDYQPDDVAGIKSATFIVKGPYAYGYLQGEQGVHRLVRIS 181

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DSN RRHTSF+++ V P + + I++EI+E D RIDT+RASGAGGQHVN TDSAVRITH
Sbjct: 182 PFDSNKRRHTSFAAVSVIPEIGEEIKVEINEDDLRIDTFRASGAGGQHVNKTDSAVRITH 241

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           IPTG+VV CQ ERSQ +N+A+A  ML+AKLY+LE++K++E     E  K EI WG QIRS
Sbjct: 242 IPTGIVVSCQSERSQIQNRAKAMQMLKAKLYQLEIEKQKEKRKELEGEKKEISWGSQIRS 301

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           YV  PYQMVKDLRT  E  +   V+DG++D FM+  L  K
Sbjct: 302 YVFHPYQMVKDLRTGYETGNIQAVMDGEIDSFMETYLKYK 341


>gi|307723715|ref|YP_003903466.1| hypothetical protein Thet_0528 [Thermoanaerobacter sp. X513]
 gi|307580776|gb|ADN54175.1| hypothetical protein Thet_0528 [Thermoanaerobacter sp. X513]
          Length = 368

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 165/350 (47%), Positives = 233/350 (66%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
            ++  +G   D ++  + +  ++ K  DP  W ++ +++ L ++++ L   +     +  
Sbjct: 14  EEIKEMGVSLDIESVKREIEEIDKKMSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVS 73

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
           +  D   L+EL LEE D SI  E     + +K ++E  + ++LL+G  D N+A L +HAG
Sbjct: 74  KWEDLSTLIELGLEEGDESITDEVDKEYKELKKKLEDLKIKTLLNGLYDKNNAILSIHAG 133

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           +GGTE+QDWA MLLRMYTRWA  + F+ E L+   GEEAGIKS TL+IKGP AYG+LK E
Sbjct: 134 SGGTEAQDWAEMLLRMYTRWANDKGFEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSE 193

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHRLVRISP+D+  RRHTSF+ + V P +++ IE+EI   D +IDTYRASGAGGQ+VN
Sbjct: 194 AGVHRLVRISPFDAAGRRHTSFALVEVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVN 253

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T+SAVRITH+PTG+VV CQ ERSQ +N+  A  ML+AKL +L +++++E     +    
Sbjct: 254 KTESAVRITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHR 313

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           E  WG QIRSYV QPY +VKD RTN E  +   V+DG++D F+ A L  K
Sbjct: 314 EAAWGNQIRSYVFQPYTLVKDHRTNYEVGNVQAVMDGEIDGFINAYLKQK 363


>gi|167748494|ref|ZP_02420621.1| hypothetical protein ANACAC_03238 [Anaerostipes caccae DSM 14662]
 gi|317471975|ref|ZP_07931307.1| peptide chain release factor 2 protein [Anaerostipes sp. 3_2_56FAA]
 gi|167652486|gb|EDR96615.1| hypothetical protein ANACAC_03238 [Anaerostipes caccae DSM 14662]
 gi|316900379|gb|EFV22361.1| peptide chain release factor 2 protein [Anaerostipes sp. 3_2_56FAA]
          Length = 367

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 179/350 (51%), Positives = 236/350 (67%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
              L  L G    +   +R+  L    E P  W+++ E++ ++RE + L + +   + ++
Sbjct: 15  REPLEKLSGSLGLEEKKERIEQLELDMEAPGFWEDLEESQKVVREVKGLKDQVEGYEGLK 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            +  D   L+E+A EE+D  +  ET +     +   E  +  +LLSGE D N+A L +HA
Sbjct: 75  GQFEDIETLIEMASEEEDEELAAETQEAFAEFETAYENLRISTLLSGEYDKNNAILSLHA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTES DWA ML RMYTRWA K+ F+T+ ++  DG+EAGIKS T+ IKG NAYG+L+ 
Sbjct: 135 GAGGTESCDWAGMLYRMYTRWAGKKGFETKVIDYLDGDEAGIKSVTVEIKGENAYGYLRS 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+++  +R TSF+S  V P +D+ + +EI++ D RIDTYRASGAGGQH+
Sbjct: 195 ERGVHRLVRISPFNAAGKRQTSFASCDVMPEIDEDLNVEIADEDIRIDTYRASGAGGQHI 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N TDSA+RITHIPTG+VVQCQ ERSQHKNK QA  ML+ KLY L+ Q+  E  +      
Sbjct: 255 NKTDSAIRITHIPTGIVVQCQNERSQHKNKDQAMKMLKTKLYLLKEQQHLEKLSDIRGDV 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            + GWG QIRSYVLQPY MVKD RTN E  +PS VLDGDLD FM A LA 
Sbjct: 315 GDNGWGSQIRSYVLQPYTMVKDHRTNKESGNPSAVLDGDLDGFMNAYLAW 364


>gi|331007552|ref|ZP_08330709.1| tRNA pseudouridine synthase D, TruD [gamma proteobacterium
           IMCC1989]
 gi|330418642|gb|EGG93151.1| tRNA pseudouridine synthase D, TruD [gamma proteobacterium
           IMCC1989]
          Length = 347

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 172/345 (49%), Positives = 242/345 (70%), Gaps = 1/345 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           CLGG+FD+D   ++L+ +  +  +P +W +   A+ L +ER  L+  +  I+ +   + D
Sbjct: 2   CLGGIFDYDAKQEQLAEVELELAEPEVWNDPARAQALGQERASLEAIVGTIQTLDTGVVD 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              LL++A+EE D SIL +  D +  +  ++   +F  + SGE D+N+AYL++ +G+GGT
Sbjct: 62  ARELLDMAVEEGDESILIDVQDEIDVLSAQLGKLEFRRMFSGETDANNAYLDIQSGSGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+QDWA M+LRMY RW E R FKT   E   G+ AGIKSAT+  +G  A+GWL+ E GVH
Sbjct: 122 EAQDWAEMVLRMYLRWGEARGFKTTLEEASAGDVAGIKSATIRFEGEYAFGWLRTETGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVR SP+DS+SRRHTSF S++V P +DD+ E+++ +S+ R DTYRASGAGGQHVN TDS
Sbjct: 182 RLVRKSPFDSSSRRHTSFCSVFVSPEIDDNFEVDVDKSEVREDTYRASGAGGQHVNKTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+TH  +G+VVQCQ +RSQH+N+  AW MLRA+LYE ELQ+R       E +K++IGW
Sbjct: 242 AVRLTHEASGIVVQCQSQRSQHQNRDTAWKMLRARLYEQELQRRNADKQAQEDNKSDIGW 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           G QIRSYVL     +KDLRTN++ ++   VLDG LD F++A+L  
Sbjct: 302 GSQIRSYVLDDQ-RIKDLRTNVQTSNCQAVLDGSLDQFIEASLKA 345


>gi|304414309|ref|ZP_07395677.1| peptide chain release factor 2 [Candidatus Regiella insecticola
           LSR1]
 gi|304283523|gb|EFL91919.1| peptide chain release factor 2 [Candidatus Regiella insecticola
           LSR1]
          Length = 344

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 178/342 (52%), Positives = 241/342 (70%), Gaps = 1/342 (0%)

Query: 12  GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           G+FD+D   +RL  ++ + E P +W     A+ L +ER  L+  +  I++++ +L D   
Sbjct: 2   GIFDYDVKQERLEEVSAELEQPDVWNKPEYAQQLGKERSTLEAIVLTIQQLERQLADVNG 61

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LL+LA+EE+D +   E    L+ ++  +   +F  + SGE DS + YL++ AG+GGTE+Q
Sbjct: 62  LLDLAVEENDEATFNEVLAELKAVENNLIQLEFRRMFSGEYDSANCYLDLQAGSGGTEAQ 121

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWANMLLRMY RWA+ + F+TE ++  DG+ AG+KSAT+ I G  A+GWL+ E GVHRLV
Sbjct: 122 DWANMLLRMYLRWADAKGFQTEIIDSSDGDVAGLKSATIKIIGDYAFGWLRTETGVHRLV 181

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS +VYP +DD + IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 182 RKSPFDSGGRRHTSFSSAFVYPEIDDKVNIEINPADLRIDVYRASGAGGQHVNKTESAVR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E +K++IGWG Q
Sbjct: 242 ITHIPTNIVTQCQNDRSQHKNKDQAMQQLKAKLYEFEMQKKNADKQLQEDNKSDIGWGSQ 301

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IRSYVL     +KDLRTN+E  +   VLDGDLD F++A+L  
Sbjct: 302 IRSYVLDD-ARIKDLRTNVETRNTQAVLDGDLDKFIEASLKA 342


>gi|237755833|ref|ZP_04584431.1| peptide chain release factor 2 [Sulfurihydrogenibium yellowstonense
           SS-5]
 gi|237691998|gb|EEP61008.1| peptide chain release factor 2 [Sulfurihydrogenibium yellowstonense
           SS-5]
          Length = 369

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 176/353 (49%), Positives = 240/353 (67%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++  + + L  +   +   + +  L+    DP+ W +  +A+ +   R +L   +  I  
Sbjct: 12  EIKEKWDNLKEILKPEKLEEEIKQLDDLMADPNFWNDTKKAQEISSRRNYLGEKLEEILT 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +++ + L  + L   E+D  +  E    L+ I+ E+   +  SLLS E DS +A L V
Sbjct: 72  VDEKINNLLDYITLLEMEEDQELYNEVEKELKEIEKEISRLELGSLLSDEMDSKNAILTV 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GG E+ DW  MLLRMYTRWAEKR ++ E ++    + AG+KSAT++IKGP AYG+L
Sbjct: 132 QAGSGGVEACDWTEMLLRMYTRWAEKRGYQVELVDFQPDDVAGVKSATVIIKGPYAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGEQGVHRLVRISP+D+N RRHTSFS++ V P +D+ I++EI+E D RIDTYRA GAGGQ
Sbjct: 192 KGEQGVHRLVRISPFDANKRRHTSFSAVSVIPEIDEDIKVEINEEDLRIDTYRAGGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITHIPTG+VV CQ ERSQ +NK +A NML+AKLY+LEL+KR+E     E 
Sbjct: 252 HVNKTDSAVRITHIPTGIVVACQSERSQLQNKLKAMNMLKAKLYQLELEKRKEKQKELEG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K +I WG QIRSYV QPYQMVKDLRT  E  +   V+DG++DDF+++ L  K
Sbjct: 312 EKKDITWGSQIRSYVFQPYQMVKDLRTGFETGNIEAVMDGEIDDFIESYLKWK 364


>gi|56421641|ref|YP_148959.1| peptide chain release factor 2 in translation [Geobacillus
           kaustophilus HTA426]
 gi|56381483|dbj|BAD77391.1| peptide chain release factor 2 in translation [Geobacillus
           kaustophilus HTA426]
          Length = 327

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 169/325 (52%), Positives = 224/325 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P+ W +   A+ ++ E   L + +     +++R  +  +  EL  EE D  +  E  
Sbjct: 1   MAAPNFWDDQKSAQAVISEANALKDLVEEFSSLEERFDNLEVTYELLKEEPDDELQAELV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +  +++  +    + + LL+   D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEK+ 
Sbjct: 61  EEAKKLMKDFSEFELQLLLNEPYDQNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   GEEAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S 
Sbjct: 121 FKVETLDYLPGEEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEIEI   + +IDTYR+SGAGGQHVNTTDSAVRITH+PTG+VV CQ ERSQ
Sbjct: 181 EVVPELDDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A NML+AKLY+ +L++++         + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNREKAMNMLKAKLYQKKLEEQQAELAELRGEQKEIGWGNQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DG++D F+ A L  K
Sbjct: 301 VEVGNVQAVMDGEIDVFIDAYLRAK 325


>gi|229586524|ref|YP_002845025.1| peptide chain release factor 2 [Rickettsia africae ESF-5]
 gi|259585246|sp|C3PMX2|RF2_RICAE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|228021574|gb|ACP53282.1| Peptide chain release factor RF-2 [Rickettsia africae ESF-5]
          Length = 368

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 188/352 (53%), Positives = 249/352 (70%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + L  L    D + + +RL+ L   T DP LW +   A+ L+RE+ +L+  ++   +
Sbjct: 11  KIEQSLELLWRSLDVEASTERLNALEELTADPSLWNDQANAQKLLREKSNLEEKLNAFNK 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D L L E+A  E+D   L +   +L+ + +     + E L SGEAD N+ +LE+
Sbjct: 71  LKSNLKDALELEEMAEAENDLETLSQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA++++RMY R+AE+  FKTE + + +GEEAGIKS T+ I G  AYGW 
Sbjct: 131 NAGAGGTESHDWASIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWF 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+++  +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQ
Sbjct: 191 KTETGVHRLVRISPFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG V QCQ +RSQHKNKAQA  ML+AKLYELE+QKR +  N   +
Sbjct: 251 HVNTTDSAVRITHIPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +KT+  WG QIRSYVLQPY MVKDLRT+ E +    VLDGDL++F+ A LA+
Sbjct: 311 TKTDNSWGHQIRSYVLQPYHMVKDLRTDYETSDTKGVLDGDLEEFVSANLAM 362


>gi|294501808|ref|YP_003565508.1| peptide chain release factor 2 [Bacillus megaterium QM B1551]
 gi|294351745|gb|ADE72074.1| peptide chain release factor 2 [Bacillus megaterium QM B1551]
          Length = 326

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 169/323 (52%), Positives = 219/323 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP+ W +   A+ ++ E   L +A++    + +   +  +  EL  EE D  + +E  
Sbjct: 1   MADPNFWNDQQAAQTVINEANGLKDAVNQFNHLDETYENLQVSYELVKEEYDEDLAEELV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L+ +   +   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEK+ 
Sbjct: 61  SELKELISGMNDFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + P  +D I I+I   D ++DTYRASGAGGQH+NTTDSAVRITH+PT VVV CQ ERSQ
Sbjct: 181 DIMPEFNDEISIDIRTEDLKVDTYRASGAGGQHINTTDSAVRITHLPTNVVVSCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML++KLY+LE++K++E        + +IGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNREQAMKMLKSKLYQLEIEKQQEQLAEIRGEQKDIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E  +   V+DGDLD F+ A L 
Sbjct: 301 TEVGNTQSVMDGDLDPFIDAYLR 323


>gi|30249212|ref|NP_841282.1| peptide chain release factor 2 [Nitrosomonas europaea ATCC 19718]
 gi|30180531|emb|CAD85140.1| Peptide chain release factor 2 [Nitrosomonas europaea ATCC 19718]
          Length = 347

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 177/343 (51%), Positives = 243/343 (70%), Gaps = 1/343 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D    RL+ L  ++EDP +W +   A+ + RE++ L+N +  ++ +  +L D  
Sbjct: 4   GGIFDFDAKQIRLTELERQSEDPAIWNDPDRAQEMGREKKSLENIVHTLQSVDRQLRDTH 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LL++A EE+D   LQ  +D++  +   +   +F  + S   D N+ ++++ +G+GGTE+
Sbjct: 64  ELLQIAQEENDKETLQSIADDVTELDQTLAGMEFRRMFSDPMDPNNCFVDIQSGSGGTEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA+ML RMY R+ E+R    E LE   G+ AGIKSATL I G  AYG+L+ E GVHRL
Sbjct: 124 QDWASMLERMYLRYCERRGLGVELLEESPGDVAGIKSATLKISGEYAYGYLRTETGVHRL 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS +RRHTSF+S++VYP VDDSIEI+I+ +D R+DT+RASGAGGQH+N TDSAV
Sbjct: 184 VRKSPFDSGNRRHTSFASVFVYPEVDDSIEIDINPADLRVDTFRASGAGGQHINKTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIPTG+VVQCQ  RSQH+N+A A  +L+++LYE EL+KR E     E SKT+I WG 
Sbjct: 244 RITHIPTGIVVQCQSGRSQHRNRADAMTVLKSRLYEAELRKRNETKQAIEDSKTDIAWGH 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QIRSYVL     +KDLRTNIE  +   VLDGDLD F++A+L  
Sbjct: 304 QIRSYVLD-QSRIKDLRTNIEIGNTQAVLDGDLDTFIEASLKQ 345


>gi|292669366|ref|ZP_06602792.1| peptide chain release factor RF2 [Selenomonas noxia ATCC 43541]
 gi|292649001|gb|EFF66973.1| peptide chain release factor RF2 [Selenomonas noxia ATCC 43541]
          Length = 368

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 175/352 (49%), Positives = 234/352 (66%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L+ +    +     ++++ L  K  +P  W +   A+ L +E   L   +   +++
Sbjct: 12  LGEKLDQMRISLEIPAKEEKIAELEYKMGEPSFWDDAAAAQKLNQELADLKGGVDTYRDL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D   L E+ +EE+D S+  +    L  I   +E  Q E LLSGE D+NDA L +H
Sbjct: 72  VAKYEDAETLYEMGIEENDASMEADIRAELTLISEGLETLQLEVLLSGEYDANDAILTLH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDW  MLLRMY RWAE+  F  +  ++  G+EAG+KSATL IKG NAYG+LK
Sbjct: 132 AGAGGTEAQDWTQMLLRMYGRWAERHGFTVDTADLQPGDEAGVKSATLFIKGHNAYGFLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DS +RRHTSFS+  V P +DD++E+ I+  D R+D +RASGAGGQH
Sbjct: 192 SEKGVHRLVRISPFDSQARRHTSFSACDVMPEIDDAVEVPINMDDVRVDYFRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T SAVR+TH PTG+VVQCQ ERSQ +NK Q   MLRAKL+ELE +K+EE     E  
Sbjct: 252 INKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCLKMLRAKLFELEQEKKEEEIARLEGV 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + +I WG QIRSYV QPY MVKD+RTN E  +   V+DGD+D F++A L  K
Sbjct: 312 QQKIEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGDIDPFIRAYLNAK 363


>gi|300913271|ref|ZP_07130588.1| hypothetical protein Teth561_PD0069 [Thermoanaerobacter sp. X561]
 gi|300889956|gb|EFK85101.1| hypothetical protein Teth561_PD0069 [Thermoanaerobacter sp. X561]
          Length = 368

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 167/356 (46%), Positives = 236/356 (66%), Gaps = 3/356 (0%)

Query: 2   KLSRQLNCLGG---LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58
           ++S  +  +     LFD ++  + +  ++ K  DP  W ++ +++ L ++++ L   +  
Sbjct: 8   EVSNMIEEIKKWGFLFDIESVKREIEEIDKKMSDPAFWSDIKKSQELAKKQKALKELLEE 67

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
              +  +  D   L+EL LEE D SI  E     + +K ++E  + ++LL+G  D N+A 
Sbjct: 68  YNSLVSKWEDLSTLIELGLEEGDESITDEVDKEYKELKKKLEDLKIKTLLNGLYDKNNAI 127

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           L +HAG+GGTE+QDWA MLLRMYTRWA  + F+ E L+   GEEAGIKS TL+IKGP AY
Sbjct: 128 LSIHAGSGGTEAQDWAEMLLRMYTRWANDKGFEVETLDYLQGEEAGIKSVTLMIKGPFAY 187

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G+LK E GVHRLVRISP+D+  RRHTSF+ + V P +++ IE+EI   D +IDTYRASGA
Sbjct: 188 GYLKSEAGVHRLVRISPFDAAGRRHTSFALVEVLPELENDIEVEIRPEDLKIDTYRASGA 247

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ+VN T+SAVRITH+PTG+VV CQ ERSQ +N+  A  ML+AKL +L +++++E    
Sbjct: 248 GGQYVNKTESAVRITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLDLMMKEKKEKIED 307

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +    E  WG QIRSYV QPY +VKD RTN E  +   V+DG++D F+ A L  K
Sbjct: 308 LKGEHREAAWGNQIRSYVFQPYTLVKDHRTNYEVGNVQAVMDGEIDGFINAYLKQK 363


>gi|302385044|ref|YP_003820866.1| hypothetical protein Closa_0615 [Clostridium saccharolyticum WM1]
 gi|302195672|gb|ADL03243.1| hypothetical protein Closa_0615 [Clostridium saccharolyticum WM1]
          Length = 377

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 172/350 (49%), Positives = 239/350 (68%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
            + L  +    D DN ++R+  L+   E+P  W++  ++  +++  ++L + +   +E++
Sbjct: 15  EKPLVEVRDSLDLDNKLKRIDELDKSMEEPGFWEDPEKSAKIVQLAKNLKDTVQSYQELE 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            +  D  +++E+  EE+D S++ E  + L+  K  +E  +  +LLSGE DS++A L ++A
Sbjct: 75  RQYEDIGVMIEMGNEENDPSLVPEVEEMLREFKESLESMRINTLLSGEYDSDNAILRLNA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTES DW  ML RM+ RWAEK+ F  E L+  DGEEAGIKS T+ I GPNAYG+LK 
Sbjct: 135 GAGGTESCDWCGMLYRMFCRWAEKKGFSLEVLDYLDGEEAGIKSVTVQINGPNAYGYLKS 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+++  +R TSF S  V P +++ +++EI+E D RIDTYR+SGAGGQH+
Sbjct: 195 EKGVHRLVRISPFNAAGKRQTSFVSCDVMPDIEEDLDVEINEEDLRIDTYRSSGAGGQHI 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SA+RITH+PTG+VVQCQ ERSQ +NK +A  ML+AKLY L+ Q+  E  +      
Sbjct: 255 NKTSSAIRITHLPTGIVVQCQNERSQFQNKDKAMQMLKAKLYMLKQQENAEKLSGIRGDV 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           TEIGWG QIRSYVLQPY MVKD RTN E  +   VLDG LD FM A L  
Sbjct: 315 TEIGWGNQIRSYVLQPYTMVKDHRTNAETGNVGSVLDGSLDQFMYAYLRW 364


>gi|187478021|ref|YP_786045.1| peptide chain release factor 2 [Bordetella avium 197N]
 gi|123515203|sp|Q2L224|RF2_BORA1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|115422607|emb|CAJ49132.1| peptide chain release factor 2 [Bordetella avium 197N]
          Length = 367

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 171/350 (48%), Positives = 247/350 (70%), Gaps = 1/350 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           + +   L    D+D   +RL  +N + EDP +W +   A+ L RE++ L++ +  + E+ 
Sbjct: 17  AEREQALRRYLDYDAKTERLHVVNAELEDPAVWNDPKHAQDLGREKKSLEDVVQTLTELG 76

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             + D L L ELA  ++D + L+   ++    +  +E  +F  + S  AD  + +L++ A
Sbjct: 77  QGVADALELFELAAADEDDATLESIENDANTFQERLEGLEFRRMFSNPADPLNCFLDIQA 136

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDWA+MLLR Y ++AE++ FK E LE  +GE AGIKSAT+ ++G  A+G+L+ 
Sbjct: 137 GAGGTEAQDWASMLLRQYLKYAERKGFKAEVLEESEGEIAGIKSATIKLEGEYAFGYLRT 196

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS+  RHTSF+S++VYP VD+S E+E++ +D R+DTYRASGAGGQH+
Sbjct: 197 ETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRVDTYRASGAGGQHI 256

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N TDSAVRITH+P+G+VVQCQ +RSQH+N+A+A  ML++KLYELE++KR       E SK
Sbjct: 257 NKTDSAVRITHMPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRKRMAEQQKLEDSK 316

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           T++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 317 TDVGWGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQ 365


>gi|312130867|ref|YP_003998207.1| bacterial peptide chain release factor 2 (brf-2) [Leadbetterella
           byssophila DSM 17132]
 gi|311907413|gb|ADQ17854.1| bacterial peptide chain release factor 2 (bRF-2) [Leadbetterella
           byssophila DSM 17132]
          Length = 358

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 156/352 (44%), Positives = 227/352 (64%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  L G+FD+DN  ++L  L  +   P  W +   A+ +++E Q L N     +E 
Sbjct: 9   LRARVTALRGIFDYDNRKEKLGDLENQQAQPEFWNDSDHAQTVVKEIQVLKNWTEAYEEA 68

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  + D   L E   E +            ++    +E  + + +LS E D   A +E++
Sbjct: 69  EASISDLETLFEFYQEGEVEEEE--VDTEAKKTVQIIEELELKKMLSSEEDQFSAIIEIN 126

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA+ML RMY  WA+K  +K   ++  DG+ AGIKSA++ I GP AYG+LK
Sbjct: 127 SGAGGTESQDWASMLYRMYLMWAQKHGYKVTQVDWTDGDGAGIKSASMQIDGPLAYGYLK 186

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DSN+RRHTSF+S++ YP+VDD+IE+E+ ++D    T R+ GAGGQ+
Sbjct: 187 SENGVHRLVRISPFDSNARRHTSFASVYAYPLVDDTIEVEVKDADIEWQTSRSGGAGGQN 246

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++ V++TH PTG+V+ CQ ERSQ  NK  A NML+++LY++EL+KR       E+S
Sbjct: 247 VNKVETKVQLTHKPTGIVIVCQIERSQLANKEHAMNMLKSRLYQIELEKRNAARADIEAS 306

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K +I WG QIR+YV  PY++VKD RT  E +    V+DG++DDF+KA L + 
Sbjct: 307 KKKIEWGSQIRNYVFHPYKLVKDARTGHETSDIQRVMDGEIDDFIKAYLMLD 358


>gi|254555779|ref|YP_003062196.1| peptide chain release factor 2 [Lactobacillus plantarum JDM1]
 gi|300767562|ref|ZP_07077472.1| peptide chain release factor RF2 [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308179754|ref|YP_003923882.1| peptide chain release factor 2 [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|254044706|gb|ACT61499.1| peptide chain release factor 2 [Lactobacillus plantarum JDM1]
 gi|300494547|gb|EFK29705.1| peptide chain release factor RF2 [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308045245|gb|ADN97788.1| peptide chain release factor 2 [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 357

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 170/347 (48%), Positives = 220/347 (63%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
             LGG FD D   + +     +  +P  W +   A+ ++ E   L       K++ D + 
Sbjct: 4   TTLGGRFDLDALNESIQENEARMAEPGFWDDQAAAQKVIDENNVLKGKYDTFKQLADEVG 63

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D  +  EL  EE D  +  E   + Q  + +++  +   LL G  D N+A LE+H GAGG
Sbjct: 64  DLAVAYELLSEEPDAEMQAEFETDFQHAEHDLQQYRLNLLLDGPYDRNNAILEIHPGAGG 123

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TESQDW  MLLRMYTRWA    FK E ++   G+EAGIKS TLLI G NAYG+L+ E+GV
Sbjct: 124 TESQDWGAMLLRMYTRWAASHNFKVETVDYQAGDEAGIKSVTLLISGHNAYGYLRSEKGV 183

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVRISP+D+  RRHTSF+S+ V P +DD+++++I   D +ID YRASGAGGQHVN T 
Sbjct: 184 HRLVRISPFDAAGRRHTSFASVDVMPELDDTVDVDIRPEDLKIDVYRASGAGGQHVNKTS 243

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VV  Q +RSQ +N+  A NMLRAKLYE E +K+ +     +  + +IG
Sbjct: 244 SAVRITHVPTGIVVASQAQRSQLQNRQTALNMLRAKLYEREEEKKAKERAAIQGEQMDIG 303

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYV  PY MVKD RTN E      V+DGDLD FM A L  K
Sbjct: 304 WGSQIRSYVFHPYTMVKDHRTNYESHDGQAVMDGDLDPFMDAYLQWK 350


>gi|298370446|ref|ZP_06981762.1| peptide chain release factor 2 [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298281906|gb|EFI23395.1| peptide chain release factor 2 [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 367

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 170/351 (48%), Positives = 241/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK + LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIDILEEDDGEIAGINRATIRLEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L  
Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|254804065|ref|YP_003082286.1| peptide chain release factor 2 [Neisseria meningitidis alpha14]
 gi|254667607|emb|CBA03375.1| peptide chain release factor 2 [Neisseria meningitidis alpha14]
 gi|254673936|emb|CBA09720.1| peptide chain release factor RF-2 [Neisseria meningitidis alpha275]
 gi|309379815|emb|CBX21591.1| unnamed protein product [Neisseria lactamica Y92-1009]
 gi|325143543|gb|EGC65864.1| peptide chain release factor 2 [Neisseria meningitidis M01-240013]
 gi|325207035|gb|ADZ02488.1| peptide chain release factor 2 [Neisseria meningitidis M04-240196]
          Length = 367

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 171/351 (48%), Positives = 241/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LEKRSEDIRVYMDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L  
Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|261401531|ref|ZP_05987656.1| peptide chain release factor 2 [Neisseria lactamica ATCC 23970]
 gi|269208367|gb|EEZ74822.1| peptide chain release factor 2 [Neisseria lactamica ATCC 23970]
          Length = 367

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 171/351 (48%), Positives = 241/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LEKRSEDIRVYMDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ASGIEDNRMLIEMTVEENDEEGFAAVKEDVVGLEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L  
Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|148560211|ref|YP_001258893.1| peptide chain release factor 2 [Brucella ovis ATCC 25840]
 gi|256369345|ref|YP_003106853.1| peptide chain release factor 2 [Brucella microti CCM 4915]
 gi|148371468|gb|ABQ61447.1| peptide chain release factor 2 [Brucella ovis ATCC 25840]
 gi|255999505|gb|ACU47904.1| peptide chain release factor 2 [Brucella microti CCM 4915]
          Length = 375

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 221/353 (62%), Positives = 286/353 (81%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + ++ L    DWD AV+RL +LN + EDP LW +  EA+ LMRERQ L+++I+ I  
Sbjct: 11  EIQQAISLLRRHLDWDQAVKRLGYLNQRAEDPTLWNDAQEAQKLMRERQQLEDSINGINH 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D++ L+ +  EE D SI+++    ++ +K E++ +Q + LLSGEAD+ND YLEV
Sbjct: 71  LKQTLNDSVELIAMGEEEGDKSIVEDAEKTIRDLKDEIDRRQIDMLLSGEADANDTYLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA+MLLRMYTRWAE+   K E +E+H+GEEAGIKSAT+L+KG N+YG L
Sbjct: 131 HAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGIKSATILVKGHNSYGML 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+IE++++E+D RIDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTEADVRIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LYE EL+KREE  +   +
Sbjct: 251 HVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLYEEELKKREEATDAANA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG +  FM+A LA +
Sbjct: 311 TKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTPFMEAALAHR 363


>gi|319638812|ref|ZP_07993570.1| peptide chain release factor 2 [Neisseria mucosa C102]
 gi|317399716|gb|EFV80379.1| peptide chain release factor 2 [Neisseria mucosa C102]
          Length = 367

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 173/351 (49%), Positives = 242/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+A+EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ASGIEDNRMLIEMAVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSFSS++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEDG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L  
Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|121635783|ref|YP_976028.1| peptide chain release factor 2 [Neisseria meningitidis FAM18]
 gi|261378556|ref|ZP_05983129.1| peptide chain release factor 2 [Neisseria cinerea ATCC 14685]
 gi|304388773|ref|ZP_07370830.1| peptide chain release factor RF2 [Neisseria meningitidis ATCC
           13091]
 gi|166225113|sp|A1KWK6|RF2_NEIMF RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|120867489|emb|CAM11266.1| peptide chain release factor 2 [Neisseria meningitidis FAM18]
 gi|254671300|emb|CBA08663.1| peptide chain release factor RF-2 [Neisseria meningitidis alpha153]
 gi|261393453|emb|CAX51098.1| peptide chain release factor II (RF-2) [Neisseria meningitidis
           8013]
 gi|269145108|gb|EEZ71526.1| peptide chain release factor 2 [Neisseria cinerea ATCC 14685]
 gi|304337265|gb|EFM03442.1| peptide chain release factor RF2 [Neisseria meningitidis ATCC
           13091]
 gi|308390220|gb|ADO32540.1| peptide chain release factor 2 [Neisseria meningitidis alpha710]
 gi|325131224|gb|EGC53936.1| peptide chain release factor 2 [Neisseria meningitidis M6190]
          Length = 367

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 171/351 (48%), Positives = 241/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L  
Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|294668116|ref|ZP_06733223.1| peptide chain release factor 2 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291309824|gb|EFE51067.1| peptide chain release factor 2 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 367

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 172/351 (49%), Positives = 241/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSFSS++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L  
Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|121595079|ref|YP_986975.1| peptide chain release factor 2 [Acidovorax sp. JS42]
 gi|222111422|ref|YP_002553686.1| hypothetical protein Dtpsy_2248 [Acidovorax ebreus TPSY]
 gi|229576664|sp|A1W9H4|RF2_ACISJ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|254790913|sp|B9MBK7|RF2_DIAST RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|120607159|gb|ABM42899.1| bacterial peptide chain release factor 2 (bRF-2) [Acidovorax sp.
           JS42]
 gi|221730866|gb|ACM33686.1| conserved hypothetical protein [Acidovorax ebreus TPSY]
          Length = 367

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 171/351 (48%), Positives = 239/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +   L    D+D   +RL  +N   EDP +W +  +A+ L +E++ LD  +  ++++
Sbjct: 16  LTERTQELRRYLDYDAKFERLRTVNASLEDPAVWNDPKKAQELGKEKKSLDAVVLTLQKL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN  L E++ EE D + L       ++++  +E  +F  + S EAD  + ++++ 
Sbjct: 76  TTELADNAELYEMSKEEGDEAGLTTIEAEAEKLRPLIEELEFRRMFSNEADPLNCFVDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y ++AE++ FK    E   G+ AGIKSAT+ I+G  AYG L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLKYAERKGFKATVEEETPGDVAGIKSATIKIEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+  RHTSF+S++VYP +DDSIEI I+ SD R DTYRASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASLFVYPEIDDSIEININPSDVRTDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+ E++KR E     E +
Sbjct: 256 INKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKRMEEQQKLEDT 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 316 KTDVGWGHQIRSYVLD-NSRIKDLRTNVEVSATQKVLDGDLDVFIEASLKQ 365


>gi|255020528|ref|ZP_05292592.1| peptide chain release factor 2 [Acidithiobacillus caldus ATCC
           51756]
 gi|254970048|gb|EET27546.1| peptide chain release factor 2 [Acidithiobacillus caldus ATCC
           51756]
          Length = 349

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 184/344 (53%), Positives = 249/344 (72%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGG+FD      RL  +  ++EDP LW++   A+ L RER  L+  +  ++E+  +L D+
Sbjct: 5   LGGIFDLPGKAARLEEVQLESEDPKLWEDPERAQALERERTQLEAVVRPLQELDQKLRDS 64

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             ++ELA+ E D ++L+  + +L+  +  VE  +F+ + SG  D  DA++++ AGAGGTE
Sbjct: 65  AEMVELAVAEQDEALLEAVAGDLEAARATVEKLEFQRMFSGPQDGADAFVDIQAGAGGTE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANMLLRMY  W E R F TE +E+ +GE AGIKSA+L ++G +A+GWL+ E GVHR
Sbjct: 125 AQDWANMLLRMYLHWCEARGFSTELVEVSEGEVAGIKSASLHVRGDHAFGWLRTETGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS +RRHTSF+S++VYP +DDS EIEI+ +D ++DTYRASGAGGQHVN TDSA
Sbjct: 185 LVRKSPFDSGNRRHTSFASVFVYPEIDDSFEIEINPADLKVDTYRASGAGGQHVNKTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+THIPTG+VV CQ +RSQHKN+A+A  MLR+KLYELE+QKR       E +K++IGWG
Sbjct: 245 VRLTHIPTGIVVACQTDRSQHKNRAEAMRMLRSKLYELEMQKRNAEKQALEDTKSDIGWG 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSYVL     +KDLRT +E      VLDGDLD F++A L  
Sbjct: 305 HQIRSYVLD-QSRIKDLRTGVEVGDTQRVLDGDLDGFVEAALKA 347


>gi|325135363|gb|EGC57984.1| peptide chain release factor 2 [Neisseria meningitidis M0579]
 gi|325208983|gb|ADZ04435.1| peptide chain release factor 2 [Neisseria meningitidis NZ-05/33]
          Length = 367

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 171/351 (48%), Positives = 241/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LEKRSEDIRVYMDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ATGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L  
Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|149184652|ref|ZP_01862970.1| protein chain release factor B [Erythrobacter sp. SD-21]
 gi|148831972|gb|EDL50405.1| protein chain release factor B [Erythrobacter sp. SD-21]
          Length = 375

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 199/353 (56%), Positives = 262/353 (74%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   L  +    DW+ A++RL  L+ + +DP LW +  +A+ + +E++ L+ AI+ ++E
Sbjct: 11  RIEAALALVRQSLDWERALRRLDELDARVQDPTLWDDPKQAQAITQEQKRLETAINTVRE 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  + D +  +E+   E D  ++ E   +L  +    +  + ++LLSGEAD ND+Y+E+
Sbjct: 71  IESEMGDAMEFVEMGEAEGDDDVVNEGLTSLSTLADRADRDKVQALLSGEADGNDSYIEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA ML RMY RWAE+R FK E +E   G++AGIKSATLL+KG NAYG+ 
Sbjct: 131 HAGAGGTESQDWAEMLFRMYGRWAERRGFKVETVEYQAGDQAGIKSATLLLKGENAYGYA 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD I+IEI+ SD +IDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDDIDIEINPSDLKIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV  Q +RSQHKNKA A NML+A+L+E E+ +RE  A+    
Sbjct: 251 HVNTTDSAVRITHQPTGIVVASQNDRSQHKNKATAMNMLKARLFEREMAEREAAASGEYQ 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K++IGWG QIRSYVLQPYQMVKDLRT +   +P DVLDG LD F+ A LA +
Sbjct: 311 EKSDIGWGHQIRSYVLQPYQMVKDLRTGVTSPTPDDVLDGALDPFISAALAQR 363


>gi|15677951|ref|NP_275123.1| peptide chain release factor 2 [Neisseria meningitidis MC58]
 gi|24638159|sp|Q9JXB3|RF2_NEIMB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|7227395|gb|AAF42446.1| peptide chain release factor 2 [Neisseria meningitidis MC58]
 gi|316984027|gb|EFV63006.1| peptide chain release factor 2 [Neisseria meningitidis H44/76]
 gi|325139451|gb|EGC61991.1| peptide chain release factor 2 [Neisseria meningitidis CU385]
          Length = 367

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 170/351 (48%), Positives = 241/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ F+ E LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFRIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L  
Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|261365043|ref|ZP_05977926.1| peptide chain release factor 2 [Neisseria mucosa ATCC 25996]
 gi|296313763|ref|ZP_06863704.1| peptide chain release factor 2 [Neisseria polysaccharea ATCC 43768]
 gi|288566638|gb|EFC88198.1| peptide chain release factor 2 [Neisseria mucosa ATCC 25996]
 gi|296839690|gb|EFH23628.1| peptide chain release factor 2 [Neisseria polysaccharea ATCC 43768]
          Length = 367

 Score =  277 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 172/351 (49%), Positives = 241/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSFSS++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L  
Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|70728519|ref|YP_258268.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           fluorescens Pf-5]
 gi|68342818|gb|AAY90424.1| peptide chain release factor 2 (RF-2) [Pseudomonas fluorescens
           Pf-5]
          Length = 364

 Score =  277 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 183/350 (52%), Positives = 243/350 (69%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   + G  D+D   +RL+ +N + EDP +W     A+ L RER  L   +  + E+
Sbjct: 13  LSERSETIRGYLDYDQKHERLTEVNRELEDPSVWNKPEYAQELGRERAALAQIVETLDEL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LL++A+EE+D   + +    L R++  +   +F  + S E D N+AYL++ 
Sbjct: 73  NGGLADCRDLLDMAVEEEDEGAVGDVVAELARLEENLAKLEFRRMFSHEMDPNNAYLDIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK AT+ IKG  A+GWL+
Sbjct: 133 AGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ +D RIDTYR+SGAGGQH
Sbjct: 193 TEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYE E+QKR   +   E +
Sbjct: 253 VNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRAKLYEQEMQKRNAASQALEDT 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K++IGWG QIRSYVL     +KDLRTNIE++    VLDGD+D++++A+L 
Sbjct: 313 KSDIGWGHQIRSYVLD-ASRIKDLRTNIERSDCDKVLDGDIDEYLEASLK 361


>gi|84684982|ref|ZP_01012882.1| peptide chain release factor 2 [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84667317|gb|EAQ13787.1| peptide chain release factor 2 [Rhodobacterales bacterium HTCC2654]
          Length = 375

 Score =  277 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 198/352 (56%), Positives = 246/352 (69%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  L     W+ A  RL  LN  TEDP LW +   A+ LMRERQ L   +   K +
Sbjct: 12  IEKSLALLRQRIGWETAEHRLEELNAMTEDPELWNDPDRAQKLMRERQSLVAQMDGYKAM 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D++ L+EL   EDD  ++++    L+ +K      + E+LL+GEAD ND +LEVH
Sbjct: 72  EQEKNDSVELIELGEMEDDDEVVKDAEAALKALKERAAAAEIEALLNGEADPNDTFLEVH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTES DWA+ML RMY RWAE   +K E      GEEAGIKSAT  I G NAYGWLK
Sbjct: 132 SGAGGTESCDWASMLARMYVRWAEAHGYKVELQSTTPGEEAGIKSATYKISGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IE+E++ +D RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEVEVAPNDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV    E+SQH+N+  A   L+++LY++EL +R +  N    +
Sbjct: 252 VNTTDSAVRITHIPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNQAINEAHEN 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K + GWG QIRSYVLQPYQMVKDLRT+ E +    VLDGDLD  M ATLA+ 
Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTSFETSDTQGVLDGDLDGLMAATLAMD 362


>gi|218767251|ref|YP_002341763.1| peptide chain release factor 2 [Neisseria meningitidis Z2491]
 gi|24638158|sp|Q9JWV4|RF2_NEIMA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|121051259|emb|CAM07534.1| peptide chain release factor 2 [Neisseria meningitidis Z2491]
 gi|319411456|emb|CBY91871.1| peptide chain release factor II (RF-2) [Neisseria meningitidis WUE
           2594]
          Length = 367

 Score =  277 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 171/351 (48%), Positives = 241/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ATGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L  
Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|225077011|ref|ZP_03720210.1| hypothetical protein NEIFLAOT_02063 [Neisseria flavescens
           NRL30031/H210]
 gi|261379582|ref|ZP_05984155.1| peptide chain release factor 2 [Neisseria subflava NJ9703]
 gi|224951568|gb|EEG32777.1| hypothetical protein NEIFLAOT_02063 [Neisseria flavescens
           NRL30031/H210]
 gi|284798056|gb|EFC53403.1| peptide chain release factor 2 [Neisseria subflava NJ9703]
          Length = 367

 Score =  277 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 173/351 (49%), Positives = 242/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LEKRSEDIRVYMDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVVTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+A+EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ATGIEDNRMLIEMAVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSFSS++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L  
Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|218666919|ref|YP_002424975.1| peptide chain release factor 2, programmed frameshift
           [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|226739123|sp|B7J4M2|RF2_ACIF2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|218519132|gb|ACK79718.1| peptide chain release factor 2, programmed frameshift
           [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 365

 Score =  277 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 174/351 (49%), Positives = 239/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  L G  D +    RL  +  + EDP +W N  +A+ L RER  L+  I+ + ++
Sbjct: 14  LQVRVAGLRGYLDLEEKRGRLEEVQRELEDPTIWNNAEKAQELGRERSALEAVITPMDKL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   +LELAL E D  +L     +L      VE  +F+ + SG  D+ + ++++ 
Sbjct: 74  TASLADGGEMLELALSEQDAELLAAVDADLDTALSLVEKLEFQRMFSGAQDAANCFVDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA M+LRMY  WAE   F  E +E+ +GE AGIKSA++ ++G +A+GWL+
Sbjct: 134 AGAGGTEAQDWAEMILRMYLHWAESHGFAAELVEVSEGEVAGIKSASIHVRGDHAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSF+S++VYP +DDS E++I+ +D ++DTYRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGNRRHTSFASVFVYPEIDDSFEVDINPADLKVDTYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSA+RITH+P+G+VV CQ +RSQHKN+A+A  MLR+KLYE+E+QKR       E S
Sbjct: 254 VNKTDSAIRITHVPSGIVVACQTDRSQHKNRAEAMRMLRSKLYEMEMQKRAVEKQALEDS 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E      VLDG LD F++A L  
Sbjct: 314 KSDIGWGHQIRSYVLD-QSRIKDLRTGVEVGDTQKVLDGALDMFIEAALKA 363


>gi|212640382|ref|YP_002316902.1| protein chain release factor B [Anoxybacillus flavithermus WK1]
 gi|212561862|gb|ACJ34917.1| Protein chain release factor B [Anoxybacillus flavithermus WK1]
          Length = 329

 Score =  277 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 165/325 (50%), Positives = 222/325 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +   A+ ++ E   L + +   + +++R  +  +  EL  EE D  + +E  
Sbjct: 1   MAAPDFWDDQKAAQSVISEANALKDLVGEFRSLEERFENLEVTYELVKEEPDEELQKELV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              +++  +    + + LL+   D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEK+ 
Sbjct: 61  AEAKKLSKDFSEFELQLLLNEPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K E L+   GEEAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S 
Sbjct: 121 YKVETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  DD+IEI++   + ++DTYR+SGAGGQHVNTTDSAVRITHIPTG+VV CQ ERSQ
Sbjct: 181 EVVPEFDDNIEIDVRPDEIKVDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A NML+AKLY+ +L++++         + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNREKAMNMLKAKLYQKKLEEQQAELAEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DG++D F+ A L  K
Sbjct: 301 TEVGNVQAVMDGEIDVFIDAYLRSK 325


>gi|119505213|ref|ZP_01627288.1| tRNA pseudouridine synthase D, TruD [marine gamma proteobacterium
           HTCC2080]
 gi|119458904|gb|EAW40004.1| tRNA pseudouridine synthase D, TruD [marine gamma proteobacterium
           HTCC2080]
          Length = 347

 Score =  277 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 174/342 (50%), Positives = 228/342 (66%), Gaps = 1/342 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+     RL+ +  +  +P +W     A+ L +ER  L+  +  I ++     D+ 
Sbjct: 4   GGIFDYAEKKDRLAEVELELAEPSVWDEPERAQALGKERASLELVVKTIDDLDRGSTDSH 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LLE+A+ EDD       + +   +  ++E  +F  + SGE D N+AYL+V +G+GGTE+
Sbjct: 64  DLLEMAVAEDDIDTADMVASDTSDLIAQLEKLEFRRMFSGEMDPNNAYLDVQSGSGGTEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDW  MLLRMY RW E + FK   +E   GE AG+KSAT+  +G  A+GWL+ E GVHRL
Sbjct: 124 QDWTEMLLRMYLRWGESKGFKARVVEASAGEVAGLKSATVQFEGEYAFGWLRTETGVHRL 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS  RRHTSF+SI+V P +DD+IEI+I+ +D R+DTYR+SGAGGQHVNTTDSAV
Sbjct: 184 VRKSPFDSGGRRHTSFASIFVSPEIDDNIEIDINPADLRVDTYRSSGAGGQHVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PT  VV CQ ERSQH+NK  A   LRAKLYELE+ KR       E SK +IGWG 
Sbjct: 244 RITHEPTNTVVSCQTERSQHQNKDNAMKQLRAKLYELEVLKRSADKQALEDSKADIGWGS 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 304 QIRSYVLDD-ARIKDLRTQVETRNTQAVLDGDLDKFIEASLK 344


>gi|332798808|ref|YP_004460307.1| peptide chain release factor 2 [Tepidanaerobacter sp. Re1]
 gi|332696543|gb|AEE91000.1| peptide chain release factor 2 [Tepidanaerobacter sp. Re1]
          Length = 365

 Score =  277 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 161/346 (46%), Positives = 227/346 (65%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  L    + D     ++ L  KT     W +   A+  ++    L         ++ + 
Sbjct: 16  LTELRDSLEIDKIKFEINQLEQKTFAADFWNDQELAQKTLQRLNDLKEKFDNFTLLEKKY 75

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D L L+EL  E DD  +  E  + ++  K ++E  + ++LLSG+ D  +A L +HAGAG
Sbjct: 76  DDLLTLIELCTETDDEELRTELLNEMKDFKKQLEKMKLQTLLSGKYDGRNAILTLHAGAG 135

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW +MLLRMYTRWAE + +K   L++  G+EAGIKSA +L++GPNAYG+LK E+G
Sbjct: 136 GTEAQDWVSMLLRMYTRWAEDKGYKVSILDMLPGDEAGIKSAAVLVEGPNAYGYLKSEKG 195

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+D+  RRHTSF+S+ V P +DD IEI+I   D +IDT+R+ GAGGQHVN T
Sbjct: 196 VHRLVRISPFDAAGRRHTSFASVDVMPEIDDDIEIDIKPEDLKIDTFRSGGAGGQHVNKT 255

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITHIPTG VV CQ ERSQ  N+  A  +LRAKL+++  +++++  +    S+ EI
Sbjct: 256 ESAVRITHIPTGTVVSCQNERSQQSNRNTAMKILRAKLFDIYQEEQQKELDKIRGSQKEI 315

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            WG QIRSY+  PY +VKD RT++E  +   V+DG+LD+F+ A L 
Sbjct: 316 AWGSQIRSYIFHPYSLVKDHRTDVEVGNVQAVMDGELDEFINAYLK 361


>gi|254467077|ref|ZP_05080488.1| peptide chain release factor 2 [Rhodobacterales bacterium Y4I]
 gi|206687985|gb|EDZ48467.1| peptide chain release factor 2 [Rhodobacterales bacterium Y4I]
          Length = 375

 Score =  277 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 199/352 (56%), Positives = 254/352 (72%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L  L    +W+ A  RL   N + EDP+LW +   A+ LMRERQ L ++I+  K 
Sbjct: 11  EIEKSLELLAQRMNWETAEYRLEEFNARVEDPNLWDDPEAAQKLMRERQALVDSINTYKG 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L DN+ L+EL   E+D  ++++  ++L+ +K     K+ E+LL GEAD+ND +LE+
Sbjct: 71  IKQDLSDNIELIELGEMEEDAEVVKDAEESLKALKERAAEKELEALLDGEADANDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWA+ML RMY RWAEK+ +K E      G+EAGIKSA   I G NAYGWL
Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGDEAGIKSAAYKISGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS ++RHTSFSS+WVYPVVDD+IEIE++ SD R+DTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPYDSAAKRHTSFSSVWVYPVVDDNIEIEVNPSDIRVDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG+VV    E+SQH+N+  A   L+++LY+ EL +R    N    
Sbjct: 251 HVNTTDSAVRITHIPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQQELDRRHAEINAAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K + GWG QIRSYVLQPYQMVKDLRT  E +    VLDGDLD FM ATLA+
Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTQYETSDTKGVLDGDLDGFMAATLAM 361


>gi|296127692|ref|YP_003634944.1| hypothetical protein Bmur_2678 [Brachyspira murdochii DSM 12563]
 gi|296019508|gb|ADG72745.1| hypothetical protein Bmur_2678 [Brachyspira murdochii DSM 12563]
          Length = 367

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 165/352 (46%), Positives = 232/352 (65%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  Q   L G  D D+  +R+  ++  +     W + I+A+ LM+ER  L + I  ++ +
Sbjct: 13  IKEQSEILRGYLDPDSIYKRVKEIDEISAKDDFWNDNIKAQKLMKERMLLLDKIEPVENL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
                +   L+E+A+E +D  + +E       ++   +  + ++L SGE DS +AYL ++
Sbjct: 73  IKNSNNIYELVEMAIESNDIEMEKELEGECIELQRVFDELETKNLFSGEFDSKNAYLTLN 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMY R+ E+  F  E  +   G+EAGIK  +  ++G  AYG+L+
Sbjct: 133 AGAGGTESCDWASMLSRMYVRFCERHGFTVEITDELPGDEAGIKQISFYVQGLYAYGYLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF ++ V P +D+ IE+EI+ SD R+DTYRASGAGGQH
Sbjct: 193 SEIGVHRLVRISPFDANAKRHTSFVAVSVMPDIDEDIEVEINPSDLRVDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T SA+RITHIPT +VVQCQ ERSQH NK  A  ML+AKLY+LE  K ++        
Sbjct: 253 VNKTSSAIRITHIPTNIVVQCQAERSQHNNKDMAMKMLKAKLYQLEKDKLDKEKQKIAGE 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KT+I WG QIRSYV QPYQMVKDLRT  E  + + V+DG++D+F+ A L  +
Sbjct: 313 KTDIAWGNQIRSYVFQPYQMVKDLRTGHETGNMNSVMDGNIDEFISAYLKQQ 364


>gi|285018127|ref|YP_003375838.1| peptide chain release factor 2 protein [Xanthomonas albilineans GPE
           PC73]
 gi|283473345|emb|CBA15850.1| probable peptide chain release factor 2 protein [Xanthomonas
           albilineans]
          Length = 373

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 179/343 (52%), Positives = 246/343 (71%), Gaps = 1/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG FD+D   +RL  +  + E P +W +   A+ L RER +L+  +  I  + + L ++
Sbjct: 20  YGGFFDYDAKKERLEEVARELESPDVWNDPERAQGLGRERANLEKTVGGIASVLEGLNES 79

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           L LLELA  E+D    Q    ++ R + +VE  +F+ + SG+ DS +A++++ AGAGGTE
Sbjct: 80  LELLELAESENDEDTAQGVIADVDRFQTQVEKLEFQRMFSGQMDSCNAFVDIQAGAGGTE 139

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA +LLRMY RW E R +KTE +E+  GE AGIKSATL ++G  AYGWLK E GVHR
Sbjct: 140 AQDWAEILLRMYLRWCESRGWKTELMEVSGGEVAGIKSATLRVEGDFAYGWLKTETGVHR 199

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+DS++RRHTSF+S++V P VDD+I+I+I+ +D + D YR+SGAGGQHVN T+SA
Sbjct: 200 LVRKSPFDSDNRRHTSFTSVFVSPEVDDNIDIDINPADLKTDVYRSSGAGGQHVNKTESA 259

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV CQ  RSQH+N+  A  ML AKLYELE+QKR    +  E++K++IGWG
Sbjct: 260 VRITHVPTGIVVACQTGRSQHQNRDNAMKMLAAKLYELEIQKRNAERDAVEATKSDIGWG 319

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIR+YVL     +KDLRT IE++    VLDGDLD+F++A+L 
Sbjct: 320 SQIRNYVLD-QSRIKDLRTGIERSDTQKVLDGDLDEFVEASLK 361


>gi|254477534|ref|ZP_05090920.1| peptide chain release factor 2 [Ruegeria sp. R11]
 gi|214031777|gb|EEB72612.1| peptide chain release factor 2 [Ruegeria sp. R11]
          Length = 374

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 201/351 (57%), Positives = 252/351 (71%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  L    DW+ A  RL   N + EDP+LW +   A+ LMRERQ L +AI   K I
Sbjct: 12  IEKSLELLAQRLDWETAEFRLEEFNARVEDPNLWDDADAAQALMRERQMLVDAIDTYKSI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L DN+ L+EL   EDD  ++++  + L  +K +   K+ E+LL GEADSND +LE++
Sbjct: 72  KQELADNIELIELGEMEDDNEVVKDAEEALVALKEKAAEKELEALLDGEADSNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMY RWAEK+ +K E      G+EAGIKSA   I G NAYGWLK
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGDEAGIKSAAYKISGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS ++RHTSFSS+WVYPVVDD+IEI+++ +D R+DTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDSAAKRHTSFSSVWVYPVVDDNIEIDVNPADIRVDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV    E+SQH+N+  A   L+++LY+ EL +R    N    +
Sbjct: 252 VNTTDSAVRITHIPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQQELDRRNADINAAHEA 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K + GWG QIRSYVLQPYQMVKDLRT+ E +    VLDGDLD FM ATLA+
Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTKGVLDGDLDGFMAATLAL 361


>gi|311693658|gb|ADP96531.1| peptide chain release factor 2 [marine bacterium HP15]
          Length = 351

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 183/349 (52%), Positives = 244/349 (69%), Gaps = 1/349 (0%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
             L   GG+FD+D   +RL  +  + E P +W +   A+ L +ER  L+  +  I  +  
Sbjct: 2   SALKRSGGIFDYDQRSERLIEVERELEQPSVWDDPERAQALGKERADLELIVKTIDNLTS 61

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
            L D   LL++A EE+D   + E   +L+ +  E+E  +F  + SGE D+N+AYL++ AG
Sbjct: 62  GLEDAEGLLDIAAEEEDEGTVAEIESDLEGLDKELEKLEFRRMFSGEMDANNAYLDIQAG 121

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           +GGTE+QDWANMLLRMY RWAE+R FK E +E+ +GE AGIKSAT+ I+G  AYGWL+ E
Sbjct: 122 SGGTEAQDWANMLLRMYLRWAERRGFKAEIVELMEGEVAGIKSATIHIQGDYAYGWLRTE 181

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHRLVR SP+DS +RRHTSFSS++V P VDDS EIEI+ +D R+D YRASGAGGQHVN
Sbjct: 182 TGVHRLVRKSPFDSGNRRHTSFSSVFVSPEVDDSFEIEINPADLRVDVYRASGAGGQHVN 241

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T+SAVR+TH PTG+VV CQ  RSQH+NK QA   L+AKL+E E+Q+R       E +K 
Sbjct: 242 RTESAVRLTHNPTGIVVACQAGRSQHQNKDQAMKQLKAKLFEREMQERNAEKQKAEDAKA 301

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +IGWG QIRSYVL     +KDLRT +E ++   VLDGD+D F++A+L +
Sbjct: 302 DIGWGSQIRSYVLDD-SRIKDLRTKVETSNTQSVLDGDIDKFIEASLKM 349


>gi|161871001|ref|YP_001600181.1| peptide chain release factor 2 [Neisseria meningitidis 053442]
 gi|161596554|gb|ABX74214.1| peptide chain release factor 2 [Neisseria meningitidis 053442]
          Length = 352

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 170/351 (48%), Positives = 241/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + ++   +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 1   MEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 60

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 61  ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 120

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 121 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 180

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 181 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 240

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 241 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 300

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L  
Sbjct: 301 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 350


>gi|332307386|ref|YP_004435237.1| hypothetical protein Glaag_3035 [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332174715|gb|AEE23969.1| hypothetical protein Glaag_3035 [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 365

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 183/350 (52%), Positives = 239/350 (68%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + ++   L G  D+D   +RL  +N + E P +W     A+ L +E+  L+  +  I  +
Sbjct: 14  VKQRSTSLRGYLDYDQKSERLEEVNRELESPDVWNEPERAQALGKEKVALEQVVETIVFL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D   LLELA+EE D     E   +L  +  ++E  +F  + SG  D+ND Y+++ 
Sbjct: 74  EQGCVDVEELLELAVEESDQDTFDEAEKDLAELVAKLETLEFRRMFSGPNDANDGYIDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +G+GGTE+QDWA+MLLRMY RW E   FKTE +E+ DG+ AGIKSAT+  +G  A+GWL+
Sbjct: 134 SGSGGTEAQDWASMLLRMYLRWGEAHGFKTELIEVSDGDVAGIKSATIRFEGEYAFGWLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS SRRHTSF+S++ YP +DD IEI+I  SD RIDTYRASGAGGQH
Sbjct: 194 TETGVHRLVRKSPFDSGSRRHTSFASVFAYPEIDDDIEIDIDPSDLRIDTYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVRITH PT +VVQCQ +RSQHKNKAQA   L+AKLYE E+QK+ E     E S
Sbjct: 254 VNRTDSAVRITHEPTNIVVQCQNDRSQHKNKAQAMKQLKAKLYEFEMQKQNEEKQNMEDS 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 314 KSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIQASLK 362


>gi|260575218|ref|ZP_05843218.1| peptide chain release factor 2 [Rhodobacter sp. SW2]
 gi|259022478|gb|EEW25774.1| peptide chain release factor 2 [Rhodobacter sp. SW2]
          Length = 375

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 207/352 (58%), Positives = 245/352 (69%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + R L  LG   D + A  RL  +N   ED  LW +   A+ LMRERQ L +AIS  K I
Sbjct: 12  IGRSLALLGQRMDVETAPHRLEEMNAMIEDGDLWSDPARAQKLMRERQALLDAISTHKLI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L DN+ L+E+   E D  I+ E    L+ +      K+ E+LL GEAD ND +LEV+
Sbjct: 72  ETGLRDNVELIEMGEAEGDAEIVSEAEQALRDLVELARGKELEALLDGEADGNDTFLEVN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMY RWAEK+ +K E   + DGEEAGIKSA   I GPNAYGWLK
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKKGYKVELQSMSDGEEAGIKSAAYKISGPNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEI+I   D RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIDIPAGDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT +VV     +SQH+N+      LRA+LY+LEL KR    N    +
Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREACMVALRARLYQLELDKRNAAVNAQHEA 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K + GWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD FM ATLA+ 
Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMAATLAMD 362


>gi|255066677|ref|ZP_05318532.1| peptide chain release factor 2 [Neisseria sicca ATCC 29256]
 gi|255049005|gb|EET44469.1| peptide chain release factor 2 [Neisseria sicca ATCC 29256]
          Length = 367

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 171/351 (48%), Positives = 241/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAELEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L  
Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|241760713|ref|ZP_04758805.1| peptide chain release factor 2 [Neisseria flavescens SK114]
 gi|241318894|gb|EER55420.1| peptide chain release factor 2 [Neisseria flavescens SK114]
          Length = 367

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 173/351 (49%), Positives = 242/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LEKRSEDIRIYMDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVVTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+A+EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ATGIEDNRMLIEMAVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSFSS++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFSSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L  
Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|118580454|ref|YP_901704.1| peptide chain release factor 2 [Pelobacter propionicus DSM 2379]
 gi|118503164|gb|ABK99646.1| bacterial peptide chain release factor 2 (bRF-2) [Pelobacter
           propionicus DSM 2379]
          Length = 361

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 173/343 (50%), Positives = 237/343 (69%), Gaps = 1/343 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GGLFD D   + +  + +K   P  W N   ++ +++ER  L+  +     +  +  D  
Sbjct: 9   GGLFDVDGKRESIQEIESKIAAPGFWDNADSSQGILKERTSLEKIVQLWDSLVRQQEDVR 68

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           +++EL  EE D   L+E  +   R++  VE  +F+ +LSGE D N  ++ ++ GAGGTES
Sbjct: 69  VMIELGEEEADEETLKEVGEMNNRLQQGVEAAEFQRMLSGEHDRNSCFISINPGAGGTES 128

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMY R+ EK+ +KT   +   G+EAGIKSAT  + G  AYG+LK E G+HRL
Sbjct: 129 QDWAEMLLRMYLRYCEKKGWKTSITDYQSGDEAGIKSATFSVSGEYAYGYLKAEAGIHRL 188

Query: 191 VRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           VRISP+DSN+RRHTSF+S++ +P + ++ I+I+I++SD R+DT+R+ GAGGQHVNTTDSA
Sbjct: 189 VRISPFDSNARRHTSFASVYAFPEIEEEDIDIKIADSDLRVDTFRSGGAGGQHVNTTDSA 248

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PT +VV CQ ERSQ  N+A A  +LRAKLYE E+Q+R   A+   S K EIGWG
Sbjct: 249 VRITHLPTNIVVACQSERSQILNRATAMKVLRAKLYEKEVQERTARASEIASEKKEIGWG 308

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL PY+MVKDLRT +E  +P  VLDG L++F+ A L 
Sbjct: 309 SQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGALEEFVVAYLM 351


>gi|257066737|ref|YP_003152993.1| peptide chain release factor 2 [Anaerococcus prevotii DSM 20548]
 gi|256798617|gb|ACV29272.1| bacterial peptide chain release factor 2 (bRF- 2) [Anaerococcus
           prevotii DSM 20548]
          Length = 367

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 156/354 (44%), Positives = 227/354 (64%), Gaps = 2/354 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS++L  +G   D  +  + +  L  ++  P  W +  +A+ +M +     + +S  K++
Sbjct: 14  LSQKLKLIGDSLDPASLEKEIKELEKQSASPDFWNDSDKAQKIMADLASKKDELSDYKKL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEADSNDAYLE 120
           ++ L DN  +L+L    ++             + +       +  + L GE D N+AY+ 
Sbjct: 74  ENGLVDNTDMLDLVEMSEEKETDTIEEVEDSLKNLAKLATQMKLRTQLDGEYDKNNAYIS 133

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           ++AGAGG E+ DWA+ML RMY R+ +   FK E  ++++ E  GIKSAT+ + GP AYG+
Sbjct: 134 INAGAGGLEATDWADMLFRMYKRYFDSIGFKYEIKDLNNEEAGGIKSATMHVTGPYAYGY 193

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E+GVHRLVRISP+DS SRRHTSF+S+ V+P +D++IE++I  SD RIDTYRASGAGG
Sbjct: 194 LKAEKGVHRLVRISPFDSQSRRHTSFASVDVFPELDENIELDIDPSDLRIDTYRASGAGG 253

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVN TDSAVRITHIPTGVV   Q ERSQ +N+  A N+L++KL +++ +++ E     +
Sbjct: 254 QHVNKTDSAVRITHIPTGVVATSQAERSQIQNRQTAMNLLKSKLVQIKEEEQREKIEDIQ 313

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            S ++I WG QIRSYV QPY +VKD RT  E  +   V+DGD+  F+ A LA K
Sbjct: 314 GSYSQIAWGSQIRSYVFQPYTLVKDHRTGFEMGNVEAVMDGDIQGFIDAFLADK 367


>gi|163731562|ref|ZP_02139009.1| peptide chain release factor 2 [Roseobacter litoralis Och 149]
 gi|161395016|gb|EDQ19338.1| peptide chain release factor 2 [Roseobacter litoralis Och 149]
          Length = 374

 Score =  276 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 200/353 (56%), Positives = 254/353 (71%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + L+ L    D + A  RL   N + EDP LW +   A+ LMR+RQ L +A++    
Sbjct: 11  KIQKSLDLLAQRLDVETAPYRLEEFNARVEDPTLWDDPDAAQKLMRDRQMLVDAMATHDN 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  + DN+ L+EL   EDD  ++ +  + L+ ++     K+ E+LL GEADSND +LEV
Sbjct: 71  IKQEMADNIELIELGEMEDDADVITDAENALRALEETAAKKELEALLDGEADSNDTFLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTES DWANML RMY RWAEK+ +K E   + DG+EAGIKSAT  I G NAYGWL
Sbjct: 131 NAGAGGTESCDWANMLARMYVRWAEKKGYKVELQSMSDGDEAGIKSATYKITGLNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+I+I+++ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIDIDVNPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL +R    N    
Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +K + GWG QIRSYVLQPYQMVKDLRTN E +    VLDGDLD FM ATLA+ 
Sbjct: 310 NKGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGFMAATLALD 362


>gi|163747048|ref|ZP_02154404.1| peptide chain release factor 2 [Oceanibulbus indolifex HEL-45]
 gi|161379609|gb|EDQ04022.1| peptide chain release factor 2 [Oceanibulbus indolifex HEL-45]
          Length = 374

 Score =  276 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 200/352 (56%), Positives = 251/352 (71%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++S+ L  L    D D A  RL   N + EDP+LW N   A+ LMRERQ L +AI   + 
Sbjct: 11  QISKSLELLAQRLDVDTAPYRLEEFNARVEDPNLWDNPDAAQKLMRERQSLVDAIDTYEG 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L DN+ L+EL   E D  +++E    L+ +      K+ E+LL+GEADSND +LE+
Sbjct: 71  IKQELADNVELIELGEMEGDEEVIKEAEVALKSLAATAAQKELEALLNGEADSNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTES DWA+ML RMY RWAEK+ +K +      GEEAGIKSAT  I+G NAYGWL
Sbjct: 131 NSGAGGTESCDWASMLARMYVRWAEKKGYKVDLQAESAGEEAGIKSATYKIEGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL KR  + N    
Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDKRSALVNEAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +  + GWG QIRSYVLQPYQMVKDLRTN E +    VLDGDLD  M ATLA+
Sbjct: 310 NAGDAGWGNQIRSYVLQPYQMVKDLRTNYETSDTKGVLDGDLDGLMGATLAL 361


>gi|313669297|ref|YP_004049581.1| peptide chain release factor 2 [Neisseria lactamica ST-640]
 gi|313006759|emb|CBN88229.1| peptide chain release factor 2 [Neisseria lactamica 020-06]
          Length = 367

 Score =  276 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 171/351 (48%), Positives = 241/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LEKRSEDIRVYMDYQGKKDRLEEVVGLSEDPELWNDQKRAQEIGKERKILEGIVLTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ASGIEDNRMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L  
Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|189425791|ref|YP_001952968.1| hypothetical protein Glov_2735 [Geobacter lovleyi SZ]
 gi|189422050|gb|ACD96448.1| hypothetical protein Glov_2735 [Geobacter lovleyi SZ]
          Length = 372

 Score =  276 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 170/351 (48%), Positives = 236/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +++ L    D D+  + L  L+ +   P  W +   ++ ++++R  ++  +     +
Sbjct: 12  LTSRISSLRRSLDLDSKREELQELDARIAAPGFWDDPSGSQDILKKRTVIEKLLQSWDSL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D  +++EL  E  D   L E     +R+K  VE  +F+ +LSG  D N  ++ V+
Sbjct: 72  NRQADDVRVMIELGEESSDEDTLTEVHQMNERLKSGVEEAEFQRMLSGTHDRNGCFVSVN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWANMLLRM  R+ EK+ +K    +  DGEEAG+KSAT  + G  AYG LK
Sbjct: 132 SGAGGTESQDWANMLLRMLLRYCEKKGWKAVITDYQDGEEAGLKSATFSVSGEFAYGHLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVR+SP+DSN+RRHTSF+S++V+P + ++ I+I I++SD R+DTYR+SG+GGQ
Sbjct: 192 AEAGVHRLVRLSPFDSNNRRHTSFASVFVFPEIEEEDIDIRIADSDLRVDTYRSSGSGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PT +VV CQ ERSQ  N+A A  +LRAKLYE E+++R   A+    
Sbjct: 252 HVNTTDSAVRITHLPTNIVVACQSERSQILNRATAMKVLRAKLYEKEMEERNAKASEIAG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            K EIGWG QIRSYVL PY+MVKDLRT +E  +P  VLDG LDDF+   L 
Sbjct: 312 EKREIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDSVLDGALDDFVIPFLM 362


>gi|146277893|ref|YP_001168052.1| peptide chain release factor 2 [Rhodobacter sphaeroides ATCC 17025]
 gi|145556134|gb|ABP70747.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 375

 Score =  276 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 201/352 (57%), Positives = 244/352 (69%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + R L  LG   D + A  RL   +   ED +LW +   A+ LMRERQ L + +S  + I
Sbjct: 12  IKRSLELLGQRMDLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQLSTYRLI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN+ L+EL   E D  I+ E    ++ +      K+ E+LL GEAD ND +LE++
Sbjct: 72  DTGLRDNVELIELGEAEGDTEIVTEAEAAIRTLVETARAKELEALLDGEADGNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMY RWAE++ +K E      GEEAGIKSA   I GPNAYGWLK
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIEI  ++ RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEIPANEIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT +VV     +SQH+N+  A N L+A+LY++EL KR    N    +
Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREAAMNALKARLYQMELDKRNAAINAQHEA 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K E GWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD FM+ATLA  
Sbjct: 311 KGEAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMQATLAQD 362


>gi|138896684|ref|YP_001127137.1| peptide chain release factor 2, RF-2 [Geobacillus
           thermodenitrificans NG80-2]
 gi|134268197|gb|ABO68392.1| Bacterial peptide chain release factor 2, RF-2 [Geobacillus
           thermodenitrificans NG80-2]
          Length = 327

 Score =  276 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 167/325 (51%), Positives = 222/325 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +   A+ ++ E   L   +   + + +R  +  +  EL  EE D  +  E  
Sbjct: 1   MAAPGFWDDQKAAQAIISEANALKELVGEFESLAERFDNLEVTYELLKEEPDDELQAELV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +  +++  +    + + LL+   D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEK+ 
Sbjct: 61  EEAKKLTKDFSQFELQLLLNEPYDQNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   GEEAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S 
Sbjct: 121 FKVETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEIEI   + +IDTYR+SGAGGQHVNTTDSAVRITH+PTG+VV CQ ERSQ
Sbjct: 181 EVVPEMDDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A NML+AKLY+ ++++++         + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNREKAMNMLKAKLYQKKMEEQQAELAELRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DG++D F+ A L  K
Sbjct: 301 VEVGNVQAVMDGEIDVFIDAYLRAK 325


>gi|117924338|ref|YP_864955.1| peptide chain release factor 2 [Magnetococcus sp. MC-1]
 gi|117608094|gb|ABK43549.1| bacterial peptide chain release factor 2 (bRF-2) [Magnetococcus sp.
           MC-1]
          Length = 379

 Score =  276 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 182/352 (51%), Positives = 249/352 (70%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +L  L G  +++   +RLS L +  +DP+LW +   A+ +M E+  L+  I     +
Sbjct: 20  IGEKLTLLRGHLNYEQGKERLSELESLAQDPNLWGDSERARTVMTEKNRLEKTIGEWDAL 79

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
                D   LLE+A EE D  ++ E +  +  I   +E  +   +LSGEAD+N+ ++E+H
Sbjct: 80  NSESTDARDLLEMAQEEGDSGMIAEVTAQVAAILKRLEGLELARMLSGEADANNCFIEIH 139

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++LLRMY R+ EK  FKTE ++   G+EAGIKS T+ ++G  AYG+LK
Sbjct: 140 PGAGGTESQDWASILLRMYLRYCEKSGFKTEEVDYLAGDEAGIKSVTIKVEGDYAYGYLK 199

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DS++RRHTSF+S+ VYP +DDSIEIEI + D R+DT+RASGAGGQH
Sbjct: 200 VESGVHRLVRISPFDSSARRHTSFTSVNVYPEIDDSIEIEILDKDLRVDTFRASGAGGQH 259

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSA+RITH PTG+VVQCQ  RSQH+N+ +A  MLRA+L++LE+ KR E A     +
Sbjct: 260 VNKTDSAIRITHQPTGIVVQCQSGRSQHRNRDEAMKMLRARLFQLEMDKRAEAAQAVADA 319

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K++I WG QIRSYVL PY++VKDLRT+ E  +   VLDG+LD F+KA L+ +
Sbjct: 320 KSDIAWGHQIRSYVLAPYRLVKDLRTSYETGNTDAVLDGELDGFIKAALSQR 371


>gi|85374178|ref|YP_458240.1| protein chain release factor B [Erythrobacter litoralis HTCC2594]
 gi|84787261|gb|ABC63443.1| protein chain release factor B [Erythrobacter litoralis HTCC2594]
          Length = 375

 Score =  276 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 206/353 (58%), Positives = 266/353 (75%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   L  +    DW+ A++RL  LN + +DP LW +  EA+ + RE++ L+ A+  ++E
Sbjct: 11  RIEAALALVRQSLDWERALRRLDELNARVQDPDLWNDPKEAQAISREQKTLETAVKTVRE 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I   + D +  +EL   E D  +++E   +LQ++    +  + ++LLSGEAD ND Y+E+
Sbjct: 71  IGSEMADAIEFVELGEAEGDEDVVKEGLASLQKLADRADADKVQALLSGEADGNDTYIEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA MLLRMY RWAE+R FK E +E   G++AGIKSATLL+KG NAYG+ 
Sbjct: 131 HAGAGGTESQDWAEMLLRMYARWAERRGFKVETVEYQAGDQAGIKSATLLVKGENAYGYA 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD+IEIEI++SD +IDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDNIEIEINDSDLKIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV  Q +RSQHKN+A A NML+A+L+E E+ +RE  A+    
Sbjct: 251 HVNTTDSAVRITHQPTGIVVASQNDRSQHKNRATAMNMLKARLFEREMAEREAAASGEYQ 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            KTEIGWG QIRSYVLQPYQMVKDLRT +  +SP DVLDG LD ++ A LA +
Sbjct: 311 EKTEIGWGHQIRSYVLQPYQMVKDLRTGVTSSSPDDVLDGALDPYISAALAQR 363


>gi|149914781|ref|ZP_01903311.1| LexA repressor [Roseobacter sp. AzwK-3b]
 gi|149811574|gb|EDM71409.1| LexA repressor [Roseobacter sp. AzwK-3b]
          Length = 375

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 193/353 (54%), Positives = 248/353 (70%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   L  L     W+ A  RL   N + EDP LW +  +A+ LMR+RQ L +AI+    
Sbjct: 11  EIKTSLELLRQRMGWETARHRLEEFNARVEDPQLWDDPAKAQKLMRDRQGLVDAITTHDT 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           IQ  + DN+ L+EL   E D  ++ E    ++ +  +   K+ E+LL+GEAD+NDA+LE+
Sbjct: 71  IQQEMQDNVELIELGEMEGDPDVVAEAEAAIKALARKAAQKELEALLNGEADANDAFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTES DWA+ML RMY RWAE+  +  E      GEEAGIKS T  + G NAYGWL
Sbjct: 131 HAGAGGTESCDWASMLARMYVRWAEQHGYTVELQSETAGEEAGIKSVTYKVTGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSFSS+WVYPVVDD+IEIE++ +D RIDT+R+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVVDDNIEIEVNPADIRIDTFRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL +R E       
Sbjct: 251 HVNKTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNEAIAEAHD 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +K + GWG QIRSYVLQPYQMVKDLRT++E +    VLDGDLD FM ATLA+ 
Sbjct: 310 AKGDAGWGNQIRSYVLQPYQMVKDLRTSVETSDTKGVLDGDLDQFMAATLAMD 362


>gi|196249386|ref|ZP_03148084.1| peptide chain release factor 2 [Geobacillus sp. G11MC16]
 gi|196211143|gb|EDY05904.1| peptide chain release factor 2 [Geobacillus sp. G11MC16]
          Length = 327

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 167/325 (51%), Positives = 222/325 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +   A+ ++ E   L   +   + + +R  +  +  EL  EE D  +  E  
Sbjct: 1   MAAPGFWDDQKAAQAIISEANALKELVGEFESLAERFDNLEVTYELLKEEPDDELQAELV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +  +++  +    + + LL+   D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEK+ 
Sbjct: 61  EEAKKLTKDFSQFELQLLLNEPYDQNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   GEEAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S 
Sbjct: 121 FKVETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEIEI   + +IDTYR+SGAGGQHVNTTDSAVRITH+PTG+VV CQ ERSQ
Sbjct: 181 EVVPEMDDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A NML+AKLY+ ++++++         + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNREKAINMLKAKLYQKKMEEQQAELAELRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DG++D F+ A L  K
Sbjct: 301 VEVGNVQAVMDGEIDVFIDAYLRAK 325


>gi|152980486|ref|YP_001352951.1| peptide chain release factor 2 [Janthinobacterium sp. Marseille]
 gi|166223628|sp|A6SXF4|RF2_JANMA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|151280563|gb|ABR88973.1| RF-2 peptide chain release factor [Janthinobacterium sp. Marseille]
          Length = 367

 Score =  275 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 179/351 (50%), Positives = 244/351 (69%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +   L    D+D   ++L  +N + EDP +W +   A+ L +E++ L+  +  + +I
Sbjct: 16  LTTRATELRRYLDFDVKSEKLDQVNGELEDPDVWNDQKRAQDLGKEKKSLEAIVHTLIKI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   L E+A EE D   +    ++ Q +   VE  +F  + S   D+N+ ++++ 
Sbjct: 76  DSELNDARDLFEMAREEKDEDTIVAIENDAQELLKLVEGMEFRRMFSNPMDANNCFIDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA+MLLR Y R+ E++ FK E LE  DGE AGIK+ATL ++G  AYG+L+
Sbjct: 136 AGAGGTEAQDWASMLLRQYLRYCERKGFKVEILEQSDGEVAGIKTATLKVEGDYAYGFLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS + RHTSFSS++VYP VDDSIEI+I+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSANGRHTSFSSLFVYPEVDDSIEIDINPADVRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVR+TH P+G+VVQCQ +RSQH+NKA+AW+ML+AKL+ELE++ R       E S
Sbjct: 256 INKTDSAVRLTHGPSGIVVQCQNDRSQHRNKAEAWDMLKAKLFELEMRNRMSEQQKLEDS 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KT++GWG QIRSYVL     +KDLRTN E  +   VLDGDLDDF+ A+L  
Sbjct: 316 KTDVGWGHQIRSYVLD-QSRIKDLRTNFETGNTKAVLDGDLDDFIAASLKQ 365


>gi|169826759|ref|YP_001696917.1| peptide chain release factor 2 [Lysinibacillus sphaericus C3-41]
 gi|168991247|gb|ACA38787.1| Peptide chain release factor 2 (RF-2) [Lysinibacillus sphaericus
           C3-41]
          Length = 328

 Score =  275 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 172/326 (52%), Positives = 224/326 (68%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              +P  W +   A++++ E   L   ++  KE+++   +  + LEL  EE D  + +E 
Sbjct: 1   MMLEPGFWDDQQGAQVIINEGNGLKAIVNEYKELEETHENLDMTLELLREEPDEELQEEL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              L   + ++   + + LLSG  D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR
Sbjct: 61  GKELVEFQQKMADFELQLLLSGPYDQNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E ++   G+EAGIKS T+ IKG NA+G+L+ E+GVHRLVRISP+DS+ RRHTSF S
Sbjct: 121 GFKVETMDYLPGDEAGIKSVTISIKGHNAFGYLQAEKGVHRLVRISPFDSSGRRHTSFVS 180

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
             V P  D++IEI+I   D +IDTYRA+GAGGQH+NTTDSAVRITHIPTG VVQCQ ERS
Sbjct: 181 CDVMPEFDENIEIDIRTEDLKIDTYRATGAGGQHINTTDSAVRITHIPTGTVVQCQAERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q KN+ +A  ML+ KLY+LEL+K++   +     + +IGWG QIRSYV  PY MVKD RT
Sbjct: 241 QIKNREKAMAMLKGKLYQLELEKQQAQLDEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
           N E  +   V+DGDLD F+ A L  K
Sbjct: 301 NEETGNVGAVMDGDLDPFINAYLRSK 326


>gi|319762196|ref|YP_004126133.1| peptide chain release factor 2 [Alicycliphilus denitrificans BC]
 gi|330825983|ref|YP_004389286.1| hypothetical protein Alide2_3440 [Alicycliphilus denitrificans
           K601]
 gi|317116757|gb|ADU99245.1| Peptide chain release factor 2 [Alicycliphilus denitrificans BC]
 gi|329311355|gb|AEB85770.1| hypothetical protein Alide2_3440 [Alicycliphilus denitrificans
           K601]
          Length = 367

 Score =  275 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 174/351 (49%), Positives = 236/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +   L    D+D   +RL  +N   EDP++W +  +A+ L +E++ LD  +  ++++
Sbjct: 16  LANRTQELRRYLDYDAKYERLRTVNASLEDPNVWNDPKKAQELGKEKKLLDGVVLTLQKL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN  L E++ EE D + L        ++   +E  +F  + S EAD  + Y+++ 
Sbjct: 76  TAELADNAELYEMSREEGDEAGLLAIEGEAAKLLPLIEELEFRRMFSKEADPLNCYIDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA MLLR Y ++AE++ FK    E   G+ AGIKSAT+ I+G  AYG L+
Sbjct: 136 AGAGGTEACDWAGMLLRQYLKYAERKGFKATVDEETPGDVAGIKSATIHIEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS+  RHTSF+S++VYP VDDSIEI I+ +D R DTYRASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASLFVYPEVDDSIEININPADVRTDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR+KLYE E+QKR       E +
Sbjct: 256 INKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSKLYEHEMQKRMVEQQKLEDT 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 316 KTDVGWGHQIRSYVLD-NSRIKDLRTNVEVSATQKVLDGDLDVFIEASLKQ 365


>gi|260223373|emb|CBA33874.1| Peptide chain release factor 2 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 342

 Score =  275 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 167/341 (48%), Positives = 233/341 (68%), Gaps = 1/341 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +FD+D   +RL  +N   EDP +W +  +A+ L +E++ LD  +  + ++   L DN  L
Sbjct: 1   MFDYDAKAERLRTVNASLEDPSVWNDPKKAQELGKEKKMLDGVVVTLNDLTSNLSDNTEL 60

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            E++ EE D   L        ++   VE  +F  + +  AD    +L++ AGAGGTE+ D
Sbjct: 61  YEMSKEEGDEESLLTIETETAKLTEIVEGLEFRRMFNNPADPLPCFLDIQAGAGGTEACD 120

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA+MLLR Y ++AE++ F     ++ DG+ AGIKSAT+ I G  A+G L+ E GVHRLVR
Sbjct: 121 WASMLLRQYLKYAERKGFTANVEDLTDGDTAGIKSATIKIDGEYAFGHLRTETGVHRLVR 180

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
            SP+DS+  RHTSF+S++VYP +DDSIEI+I+ +D R DT+RASGAGGQH+N TDSAVR+
Sbjct: 181 KSPFDSSGGRHTSFASVFVYPEIDDSIEIDINPADVRTDTFRASGAGGQHINKTDSAVRL 240

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           THIPTG+VVQCQ  RSQH N+  AW  LR++LY+ EL+KR+E     E +KT++GWG QI
Sbjct: 241 THIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDFELRKRQEEQQKLEDTKTDVGWGHQI 300

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           RSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 301 RSYVLD-NSRIKDLRTNVEVSATQKVLDGDLDVFIQASLKQ 340


>gi|160898706|ref|YP_001564288.1| peptide chain release factor 2 [Delftia acidovorans SPH-1]
 gi|160364290|gb|ABX35903.1| peptide chain release factor 2 [Delftia acidovorans SPH-1]
          Length = 386

 Score =  275 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 172/346 (49%), Positives = 236/346 (68%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD+D   +RL  +N   EDP +W +  +A+ L +E++ LD  +  ++++   L 
Sbjct: 40  QIYGGIFDYDAKYERLRTVNASLEDPSVWNDPKKAQELGKEKKLLDGVVLTLQKLTTELA 99

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           DN  L E++ EE D + L        +++  +E  +F  +   EAD  + ++++ AGAGG
Sbjct: 100 DNAELFEMSKEEGDETGLLTIEGETAKLQPLIEELEFRRMFGKEADPLNCFVDIQAGAGG 159

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DWA MLLR Y ++AE++ FK    E   G+ AGIKSAT+ I+G  AYG L+ E GV
Sbjct: 160 TEACDWAGMLLRQYLKYAERKGFKATVEEETPGDIAGIKSATIHIEGEYAYGLLRTETGV 219

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS+  RHTSF+S++VYP +DDSI+IEI+ SD R DTYRASGAGGQH+N TD
Sbjct: 220 HRLVRKSPFDSSGGRHTSFASLFVYPEIDDSIQIEINPSDVRTDTYRASGAGGQHINKTD 279

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+VVQCQ  RSQH N+  AW  LR+KLYE E+QKR       E +KT++G
Sbjct: 280 SAVRLTHMPTGIVVQCQDGRSQHSNRDVAWQRLRSKLYEHEMQKRMVEQQKLEDTKTDVG 339

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 340 WGHQIRSYVLD-NSRIKDLRTNVEISATQKVLDGDLDAFIEASLKQ 384


>gi|148556746|ref|YP_001264328.1| peptide chain release factor 2 [Sphingomonas wittichii RW1]
 gi|148501936|gb|ABQ70190.1| bacterial peptide chain release factor 2 (bRF-2) [Sphingomonas
           wittichii RW1]
          Length = 375

 Score =  275 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 208/353 (58%), Positives = 267/353 (75%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++++ +  +    DWD A++RL  LN + EDP LW +   A+ +MRER+ LD A+S +K 
Sbjct: 11  QINQAMALVRRFLDWDRALRRLDELNNRVEDPKLWDDAKAAQEVMRERRRLDEAVSAVKA 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+    D + L+ELA  EDD +++ +    L  +    E  +  +LL+GEAD+N+ Y+EV
Sbjct: 71  IEQERDDTIELIELAEAEDDTALVDDGVQALAALAERAEKDKIGALLAGEADANNTYIEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTESQDWA ML RMY RWAE+  +K E ++ H GE+AGIKSATLL++G NAYG+ 
Sbjct: 131 NSGAGGTESQDWAGMLQRMYARWAERHGYKVELIDFHAGEQAGIKSATLLVRGENAYGYA 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS +RRHTSF+S+WVYP VDD I+IE+ E D +IDTYR+SGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSAARRHTSFASVWVYPEVDDDIDIEVLEKDLKIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PTG++V CQ +RSQHKN+A+A   L+A+LYE ELQKRE  A  G +
Sbjct: 251 HVNTTDSAVRITHVPTGIIVACQNQRSQHKNRAEAMKQLKARLYEQELQKREAEAMAGYA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +KTEIGWG QIRSYVLQPYQMVKDLRT    T+PSDVLDGDLD FM A L+ +
Sbjct: 311 AKTEIGWGHQIRSYVLQPYQMVKDLRTGTTSTAPSDVLDGDLDRFMAAALSQR 363


>gi|293375591|ref|ZP_06621865.1| peptide chain release factor 2 [Turicibacter sanguinis PC909]
 gi|325836763|ref|ZP_08166230.1| peptide chain release factor 2 [Turicibacter sp. HGF1]
 gi|292645808|gb|EFF63844.1| peptide chain release factor 2 [Turicibacter sanguinis PC909]
 gi|325491141|gb|EGC93430.1| peptide chain release factor 2 [Turicibacter sp. HGF1]
          Length = 365

 Score =  275 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 161/352 (45%), Positives = 220/352 (62%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+S ++N      + +     +   + + +    W +  +A+ ++     + + ++    
Sbjct: 12  KMSERINQFKDSLNVEQKEAEIKEYDDQMQVAGFWDDQRKAQEVINAANAIKDKVNTFYS 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  + +  +  EL LEE D  +  E    ++ +   +   + E LLSG  D+N+A LE+
Sbjct: 72  LEGEVEELAVAFELILEEPDADLQAELESQIEEVSEHLNKFELEILLSGPYDANNAILEL 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA ML RMYTR+AE++ FK E L+   GEEAGIKS T+ IKG NA+G+ 
Sbjct: 132 HPGAGGTESQDWAEMLYRMYTRYAERKGFKIEVLDYLVGEEAGIKSVTIKIKGTNAFGYF 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS  RRHTSF S  V P     I+IEI   D +IDTYRASGAGGQ
Sbjct: 192 KAERGVHRLVRISPFDSGGRRHTSFCSCDVMPEFSGDIDIEIRAEDLKIDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+NTTDSAVRITHIPT  +V CQ +RSQ KN+  A  ML++KLY+ +L+++E        
Sbjct: 252 HINTTDSAVRITHIPTNTIVTCQNQRSQIKNREAAMEMLKSKLYQRKLEEQEAELAKIRG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
              EIGWG QIRSYV  PY +VKD RT+ E  +   V+DGDLD F+ A L  
Sbjct: 312 EVKEIGWGSQIRSYVFHPYSLVKDHRTSYEVGNVQSVMDGDLDGFIDAYLRY 363


>gi|238897260|ref|YP_002922937.1| peptide chain release factor RF-2 [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
 gi|229465015|gb|ACQ66789.1| peptide chain release factor RF-2 [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
          Length = 348

 Score =  275 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 177/347 (51%), Positives = 241/347 (69%), Gaps = 1/347 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GG+FD+D   +RL  +N + E P +W+    A+ L +ER  L   +  + +++  L
Sbjct: 1   MKLSGGIFDYDEKKERLEEINAELEQPDIWKQPEWAQKLGKERAILQEIVETLSQLEKEL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LL+LA+E  D     E    L+ I  ++   +F  + SG+ D  D YL++ +G+G
Sbjct: 61  KDVSTLLDLAIEAQDRETFNEAVFELEAIDKKLNRLEFRRMFSGKNDFADCYLDLQSGSG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWANMLLRMY RWA+ + FKTE +EI DGE AGIKSATL I G +A+GWL+ E G
Sbjct: 121 GTEAQDWANMLLRMYLRWADSKGFKTEIIEISDGEVAGIKSATLKITGDHAFGWLRTETG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR SP+DS +RRHTSF+S +VYP ++D+I+I+I+ +D RID YRASGAGGQH+N T
Sbjct: 181 VHRLVRKSPFDSGARRHTSFASAFVYPELEDNIDIDINPADLRIDVYRASGAGGQHINKT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITH+PT +V QCQ +RSQHKNK QA+  L+AKLYE E+QK+     I E +K++I
Sbjct: 241 ESAVRITHLPTNIVTQCQSDRSQHKNKEQAFKQLKAKLYEFEMQKKNADKKIMEDNKSDI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           GWG QIRSY+L     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 301 GWGSQIRSYILDD-SRIKDLRTGLETRNTQAVLDGYLDKFIEASLKA 346


>gi|222152785|ref|YP_002561962.1| peptide chain release factor 2 [Streptococcus uberis 0140J]
 gi|254790921|sp|B9DRN6|RF2_STRU0 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|222113598|emb|CAR41450.1| peptide chain release factor 2 [Streptococcus uberis 0140J]
          Length = 366

 Score =  275 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 155/354 (43%), Positives = 221/354 (62%), Gaps = 2/354 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           ++   +L       D D   + ++ L  K  +P  W + I A+   +E   L +      
Sbjct: 11  VENKEKLTSFRRSLDLDGLEEEIALLENKMTEPDFWNDNIAAQKTSQELNTLKSTFETFH 70

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           ++ +   +    L L +  +D SI +E  + L +++  +   +   LLS   D N+A LE
Sbjct: 71  DMLELSDETE--LYLEMLAEDESIKEELEEALVKLEQILSQYEMTLLLSEPYDHNNAILE 128

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +H G+GGTE+QDWA+ML RMYTR+   + FK E L+   G+EAGIKS TL  +GPNAYG+
Sbjct: 129 IHPGSGGTEAQDWADMLFRMYTRFGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGF 188

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E GVHRLVRISP+DS  RRHTSF+S+ V P +DD+IE++I + D ++DT+R+ GAGG
Sbjct: 189 LKSEMGVHRLVRISPFDSAKRRHTSFTSVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGG 248

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN   + VR+THIPTG+VV    +R+Q+ N+ +A  ML+AKLY+LE +K+ E  N  +
Sbjct: 249 QNVNKVSTGVRLTHIPTGIVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALK 308

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             K EI WG QIRSYV  PY MVKD RTN E      V+DG++D F+ A L  +
Sbjct: 309 GDKKEITWGSQIRSYVFTPYTMVKDHRTNFEVAQVDKVMDGEIDGFIDAYLKWR 362


>gi|241204131|ref|YP_002975227.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240858021|gb|ACS55688.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 376

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 245/353 (69%), Positives = 298/353 (84%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +  + +  L    DWD A++RL +LN K EDP+LW +  EA+ LMRERQ LD+ I+ +K+
Sbjct: 11  ETKQAITLLRRHLDWDQAIRRLDWLNNKAEDPNLWNDASEAQKLMRERQQLDDGINGVKQ 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ +L DN+ L+EL  EE D S+++E  D L+ +K E   +Q E++LSGEAD ND YLEV
Sbjct: 71  LEQQLNDNIELIELGEEEGDQSVVKEAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H+GAGGTESQDWANMLLRMYTRWAE+++FK E LE+HDGEEAGIKSATLL+KG NAYGWL
Sbjct: 131 HSGAGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDSN+RRHTSFSSIWVYPVVDDSI+IEI+ESDCRIDTYR+SGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG+VVQCQQERSQHKN+A+AW+MLRA++YE EL+KRE+ A+   +
Sbjct: 251 HVNTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDMLRARMYEAELKKREDAASAEAA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           SKTEIGWG QIRSYVLQPYQMVKDLRT +  ++P DVLDGDL++FM+A LA +
Sbjct: 311 SKTEIGWGHQIRSYVLQPYQMVKDLRTGVASSAPDDVLDGDLNEFMEAALAHR 363


>gi|23099950|ref|NP_693416.1| peptide chain release factor RF-2 [Oceanobacillus iheyensis HTE831]
 gi|22778181|dbj|BAC14451.1| peptide chain release factor RF-2 [Oceanobacillus iheyensis HTE831]
          Length = 327

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 164/325 (50%), Positives = 224/325 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ +++E   +   ++  + I++ L +  +  EL  EE+D  +  +  
Sbjct: 1   MADPSFWDDQNKAQSVIQETNGIKEYVNGFETIEENLENLEVSYELVKEENDQELFADLD 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             LQ+   +V   + + LLS   D+N+A LE+H GAGGTESQDWA+MLLRMY RWAE+R 
Sbjct: 61  AELQQFITDVNQFELQLLLSEPYDANNAILELHPGAGGTESQDWASMLLRMYQRWAEERN 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAG+KS TL+IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGLKSVTLIIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + D ++I+I   D ++DTYRASGAGGQHVNTTDSAVRITH+PT ++V CQ ERSQ
Sbjct: 181 DVTPEMSDDVDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNIIVTCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+  A  ML++KLY+LE++K+ +  +     + EIGWG QIRSYV  PY MVKD RT+
Sbjct: 241 IKNREAAMKMLKSKLYQLEVEKQRQELDDIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTD 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGD++ F+ A L  +
Sbjct: 301 KETGNTQAVMDGDINPFIDAYLRSQ 325


>gi|59802262|ref|YP_208974.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA 1090]
 gi|194099790|ref|YP_002002925.1| peptide chain release factor 2 [Neisseria gonorrhoeae NCCP11945]
 gi|239999963|ref|ZP_04719887.1| peptide chain release factor 2 [Neisseria gonorrhoeae 35/02]
 gi|240013088|ref|ZP_04720001.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI18]
 gi|240017657|ref|ZP_04724197.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA6140]
 gi|240081863|ref|ZP_04726406.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA19]
 gi|240114140|ref|ZP_04728630.1| peptide chain release factor 2 [Neisseria gonorrhoeae MS11]
 gi|240116780|ref|ZP_04730842.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID18]
 gi|240119007|ref|ZP_04733069.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID1]
 gi|240122278|ref|ZP_04735240.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID24-1]
 gi|240122455|ref|ZP_04735411.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID332]
 gi|240126695|ref|ZP_04739581.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-92-679]
 gi|240127168|ref|ZP_04739829.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-93-1035]
 gi|254493466|ref|ZP_05106637.1| peptide chain release factor 2 [Neisseria gonorrhoeae 1291]
 gi|260441572|ref|ZP_05795388.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI2]
 gi|268595771|ref|ZP_06129938.1| peptide chain release factor 2 [Neisseria gonorrhoeae 35/02]
 gi|268597961|ref|ZP_06132128.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA19]
 gi|268600216|ref|ZP_06134383.1| peptide chain release factor 2 [Neisseria gonorrhoeae MS11]
 gi|268602456|ref|ZP_06136623.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID18]
 gi|268604723|ref|ZP_06138890.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID1]
 gi|268681042|ref|ZP_06147904.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID332]
 gi|268685277|ref|ZP_06152139.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-92-679]
 gi|268685523|ref|ZP_06152385.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-93-1035]
 gi|291044943|ref|ZP_06570652.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI2]
 gi|293398016|ref|ZP_06642222.1| peptide chain release factor 2 [Neisseria gonorrhoeae F62]
 gi|75432344|sp|Q5F5H5|RF2_NEIG1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|238693228|sp|B4RQU4|RF2_NEIG2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|59719157|gb|AAW90562.1| putative peptide chain release factor 2 [Neisseria gonorrhoeae FA
           1090]
 gi|193935080|gb|ACF30904.1| PrfB [Neisseria gonorrhoeae NCCP11945]
 gi|226512506|gb|EEH61851.1| peptide chain release factor 2 [Neisseria gonorrhoeae 1291]
 gi|268549160|gb|EEZ44578.1| peptide chain release factor 2 [Neisseria gonorrhoeae 35/02]
 gi|268551749|gb|EEZ46768.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA19]
 gi|268584347|gb|EEZ49023.1| peptide chain release factor 2 [Neisseria gonorrhoeae MS11]
 gi|268586587|gb|EEZ51263.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID18]
 gi|268588854|gb|EEZ53530.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID1]
 gi|268621326|gb|EEZ53726.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID332]
 gi|268625561|gb|EEZ57961.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-92-679]
 gi|268625807|gb|EEZ58207.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-93-1035]
 gi|291011837|gb|EFE03833.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI2]
 gi|291611962|gb|EFF41031.1| peptide chain release factor 2 [Neisseria gonorrhoeae F62]
 gi|317165260|gb|ADV08801.1| peptide chain release factor 2 [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 367

 Score =  275 bits (703), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 171/351 (48%), Positives = 241/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+     RL  +   +EDP LW +   A+ + +E + L+  +  +  I
Sbjct: 16  LEKRSEDIRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKESKILEGIVLTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+A+EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ASGIEDNRMLIEMAVEENDEEGFAAVKEDVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L  
Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|126667155|ref|ZP_01738129.1| peptide chain release factor 2 [Marinobacter sp. ELB17]
 gi|126628311|gb|EAZ98934.1| peptide chain release factor 2 [Marinobacter sp. ELB17]
          Length = 351

 Score =  275 bits (703), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 183/349 (52%), Positives = 245/349 (70%), Gaps = 1/349 (0%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
             L   GG+FD+D   +RL+ +  + E P +W++   A+ L +ER  L+  +S I  +  
Sbjct: 2   SALKRSGGIFDYDQRSERLTEVERELEMPSVWEDPERAQSLGKERSDLELIVSTIDRLTS 61

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
            L D   LLE+A+EEDD + + +  ++L  +   +E  +F  + SGE D N+AYL++ AG
Sbjct: 62  GLTDAEGLLEMAVEEDDEATVADIGNDLAEMDANLEKLEFRRMFSGEMDPNNAYLDIQAG 121

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           +GGTE+QDW NMLLRMY RWAE+R FK E +E+ +GE AGIKSATL I+G  A+GWL+ E
Sbjct: 122 SGGTEAQDWGNMLLRMYLRWAERRGFKAEIVELQEGEVAGIKSATLHIQGDYAFGWLRTE 181

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHRLVR SP+DS +RRHTSFSS++V P VDDS  IEI+ +D R+D YRASGAGGQHVN
Sbjct: 182 TGVHRLVRKSPFDSGNRRHTSFSSVFVAPEVDDSFVIEINPADLRVDVYRASGAGGQHVN 241

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T+SAVR+TH PTG+VV CQ  RSQH+NK QA   L+AKL+E E+Q R       E SK+
Sbjct: 242 RTESAVRLTHNPTGIVVACQAGRSQHQNKDQAMKQLKAKLFEHEMQARNAEKQKLEDSKS 301

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +IGWG QIRSYVL     +KDLRT +E ++   VLDGD+D F++A+L +
Sbjct: 302 DIGWGSQIRSYVLDD-SRIKDLRTKVETSNTQSVLDGDIDKFIEASLKM 349


>gi|121608134|ref|YP_995941.1| peptide chain release factor 2 [Verminephrobacter eiseniae EF01-2]
 gi|121552774|gb|ABM56923.1| bacterial peptide chain release factor 2 (bRF-2) [Verminephrobacter
           eiseniae EF01-2]
          Length = 381

 Score =  275 bits (703), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 163/346 (47%), Positives = 238/346 (68%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD+D   +RL  ++   +DP +W +  +A+ L +E++ LD+ +S + ++   L 
Sbjct: 35  KNYGGIFDYDAKFERLRTVDAALQDPAVWNDPKKAQALGKEKKSLDDVVSMLDKLGRELA 94

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           DN  L E++ +E D + L        R++  +E  +F  + S EAD+ + ++++ AGAGG
Sbjct: 95  DNTELFEMSKQEGDDAGLLALQAEAARLRPGIEQLEFRRMFSKEADALNCFVDIQAGAGG 154

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DWA MLLR Y R+AE++ FK    E   G+ AG+KSAT+ ++G  AYG L+ E GV
Sbjct: 155 TEACDWAGMLLRQYLRYAERKGFKATVEEETPGDVAGLKSATIKVEGEYAYGLLRTETGV 214

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS+  RHTSF+S++VYP +DDSI+I+I+ +D R DT+R+SGAGGQH+N TD
Sbjct: 215 HRLVRKSPFDSSGGRHTSFASLFVYPEIDDSIQIDINPADVRTDTFRSSGAGGQHINKTD 274

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+VVQCQ  RSQH N+  AW  LR++LY+ E + R++     E SKT++G
Sbjct: 275 SAVRLTHLPTGIVVQCQDGRSQHGNRDIAWQRLRSRLYDHERRLRQQEQQKLEDSKTDVG 334

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSYVL     +KDLRT++E ++   VLDGDLD F++A L  
Sbjct: 335 WGHQIRSYVLD-NSRIKDLRTHVEISATQKVLDGDLDAFIEAALKQ 379


>gi|238916331|ref|YP_002929848.1| peptide chain release factor RF-2 [Eubacterium eligens ATCC 27750]
 gi|238871691|gb|ACR71401.1| peptide chain release factor RF-2 [Eubacterium eligens ATCC 27750]
          Length = 372

 Score =  275 bits (703), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 171/350 (48%), Positives = 230/350 (65%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
            + +  +    D DN  +R+  L    E P  W N  +++  M+E + L +A     E++
Sbjct: 15  DKPMAQIKKSLDLDNKQKRIEELEADMEAPGFWDNPDKSQNAMKELKGLKDAFERYNELE 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D   L+E+A E +D S++ E  + +  ++ ++E  + E+LLSGE D+ DA L +HA
Sbjct: 75  TGLDDVKTLIEMAEESNDQSLIPEIEEEITNLEDKMESLRIETLLSGEHDACDAILTLHA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTES DW  ML RMYTRWAE   + TE L+  +GEEAGIKS T+ I+G NAYG LK 
Sbjct: 135 GAGGTESCDWCQMLFRMYTRWAESHGYTTETLDYLEGEEAGIKSVTIEIRGENAYGHLKS 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVRISP+++  +R TSF S  V P ++  I+IEI++ D RIDTYR+SGAGGQH+
Sbjct: 195 EHGVHRLVRISPFNAAGKRQTSFVSCDVMPDINQDIDIEINDDDLRIDTYRSSGAGGQHI 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SA+RITH+PTG+VVQCQ ERSQH+NK +A  ML+AKLY L+  +  E  +      
Sbjct: 255 NKTSSAIRITHLPTGIVVQCQNERSQHQNKDKAMQMLKAKLYLLKEAENAENLSGIRGDV 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            +I +G QIRSYVLQPY MVKD RTN E  +   VLDG++D F+ A L  
Sbjct: 315 KDINFGSQIRSYVLQPYTMVKDNRTNKEVANAGSVLDGNIDPFINAYLTW 364


>gi|221639399|ref|YP_002525661.1| peptide chain release factor 2 [Rhodobacter sphaeroides KD131]
 gi|221160180|gb|ACM01160.1| Bacterial peptide chain release factor 2 [Rhodobacter sphaeroides
           KD131]
          Length = 375

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 204/352 (57%), Positives = 244/352 (69%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + R L  LG   D + A  RL   +   ED +LW +   A+ LMRERQ L + +S  K I
Sbjct: 12  IRRSLALLGQRMDLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQLSTYKLI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN+ L+EL   E D  I+ E    ++ +      K+ E+LL GEAD ND +LE++
Sbjct: 72  DTGLRDNVELIELGEAEGDEEIVTEAEAAIRALVETARAKELEALLDGEADGNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMY RWAE++ +K E      GEEAGIKSA   I GPNAYGWLK
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIEI  +D RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEIPANDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT +VV     +SQH+N+  A N L+A+LY+LEL KR    N    +
Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREAAMNALKARLYQLELDKRNAAINAQHEA 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K E GWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD FM+ATLA  
Sbjct: 311 KGEAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMQATLAQD 362


>gi|146308390|ref|YP_001188855.1| peptide chain release factor 2 [Pseudomonas mendocina ymp]
 gi|145576591|gb|ABP86123.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudomonas
           mendocina ymp]
          Length = 378

 Score =  275 bits (702), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 184/346 (53%), Positives = 243/346 (70%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           +  GG+FD+D+   RL  +N + ED  +W     A+ L RER  L   +  I ++   L 
Sbjct: 32  SQFGGIFDYDHKHDRLVEVNRELEDASVWNKPEYAQALGRERAMLAQIVETIDDLTGSLA 91

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D+  LLE+A EE+D   + +    ++R++  +E  +F  + SGE D N+ YL++ AG+GG
Sbjct: 92  DSRDLLEMAAEENDEGAVNDIVAEVERLREILEKLEFRRMFSGEMDPNNCYLDIQAGSGG 151

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDWAN+LLRMY RWA+KR F    +E+ +GE AGIK AT+ IKG  A+GWL+ E GV
Sbjct: 152 TEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLRTEIGV 211

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ +D RIDTYR+SGAGGQHVNTTD
Sbjct: 212 HRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTD 271

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QKR   +   E SK++IG
Sbjct: 272 SAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDSKSDIG 331

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSYVL     +KDLRT +E++    VLDGDLD +++A+L  
Sbjct: 332 WGHQIRSYVLDD-SRIKDLRTGVERSDCQKVLDGDLDGYLEASLKQ 376


>gi|56964831|ref|YP_176562.1| peptide chain release factor 2 [Bacillus clausii KSM-K16]
 gi|56911074|dbj|BAD65601.1| peptide chain release factor 2 [Bacillus clausii KSM-K16]
          Length = 328

 Score =  275 bits (702), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 172/324 (53%), Positives = 220/324 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ ++ E   L   +   K++ +   D  +  EL  EEDD  +  E  
Sbjct: 1   MADPDFWNDQEQAQAIINETNGLKEQVHTFKDMAESYDDLEVSYELVREEDDTELASELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L  +K ++   + + LLS   D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEKR 
Sbjct: 61  SGLAALKQKMNQFELQLLLSAPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEKRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L+   GEEAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FAVETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+++IE++  D +IDTYRASGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQ
Sbjct: 181 EVMPELDDAVDIELNSEDLKIDTYRASGAGGQHVNTTDSAVRITHLPTNTVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  M++AKLY+L ++++E         + EIGWG QIRSYV  PY MVKD RT 
Sbjct: 241 IKNREQAMKMMKAKLYQLRIEEQERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  + + V+DG++D F+ A L  
Sbjct: 301 FEIGNTNSVMDGEIDGFIDAYLRQ 324


>gi|313903604|ref|ZP_07836994.1| bacterial peptide chain release factor 2 (bRF-2) [Thermaerobacter
           subterraneus DSM 13965]
 gi|313466157|gb|EFR61681.1| bacterial peptide chain release factor 2 (bRF-2) [Thermaerobacter
           subterraneus DSM 13965]
          Length = 372

 Score =  275 bits (702), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 157/342 (45%), Positives = 215/342 (62%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +FD     + +  +     +P  W +   A+  +R+ + L   +   + +  +L D  +L
Sbjct: 2   IFDLAGKRREIERIEQAMTEPGFWDDPERAQHQVRQLKVLKGPVERYEALDRQLEDLQVL 61

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            ELA EE D S++ E  + + +++  +   + E LL+G  D  DA + +H GAGGTESQD
Sbjct: 62  AELAAEEADVSVIPELEEGIAQVEEGLRQLELELLLTGPYDGYDAIVSLHPGAGGTESQD 121

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA ML RMYTRWAE R ++ E L++ +GEEAGIKS T  ++GPNAYG+L+ E GVHRLVR
Sbjct: 122 WAQMLWRMYTRWAEDRGYQVEVLDLLEGEEAGIKSVTFAVRGPNAYGYLRSEHGVHRLVR 181

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+D+  RRHTSF+S+ V P + DS EIEI   D RID +RA G GGQHVN T+SAVRI
Sbjct: 182 ISPFDAAGRRHTSFASVDVLPDLGDSPEIEIRPEDLRIDVFRAGGHGGQHVNKTESAVRI 241

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
            H+PTG+V  CQ ERSQH N+  A  +L+A+L     ++R +          EI WG QI
Sbjct: 242 VHLPTGIVATCQNERSQHSNRETAMKILKARLARYYEEQRLKEIAALRGDVGEIAWGNQI 301

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           RSYV QPY +VKD RT +E  +   V+DG LD F+ A L  +
Sbjct: 302 RSYVFQPYTLVKDHRTGVEVGNVQAVMDGQLDVFINAYLKWE 343


>gi|126462391|ref|YP_001043505.1| peptide chain release factor 2 [Rhodobacter sphaeroides ATCC 17029]
 gi|126104055|gb|ABN76733.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 375

 Score =  275 bits (702), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 203/352 (57%), Positives = 245/352 (69%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + R L  LG   D + A  RL   +   ED +LW +   A+ LMRERQ L + +S  + I
Sbjct: 12  IRRSLALLGQRMDLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQLSTYRLI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN+ L+EL   E D  I+ E   +++ +      K+ E+LL GEAD ND +LE++
Sbjct: 72  DTGLRDNVELIELGEAEGDEEIVTEAEASIRALVETAGAKELEALLDGEADGNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMY RWAE++ +K E      GEEAGIKSA   I GPNAYGWLK
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIEI  +D RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEIPANDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT +VV     +SQH+N+  A N L+A+LY+LEL KR    N    +
Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREAAMNALKARLYQLELDKRNAAINAQHEA 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K E GWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD FM+ATLA  
Sbjct: 311 KGEAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMQATLAQD 362


>gi|313901293|ref|ZP_07834780.1| peptide chain release factor 2 [Clostridium sp. HGF2]
 gi|312953901|gb|EFR35582.1| peptide chain release factor 2 [Clostridium sp. HGF2]
          Length = 349

 Score =  275 bits (702), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 149/346 (43%), Positives = 210/346 (60%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  L   FD      ++  L + T     W +   A+ L+R+   + + +   +++   L
Sbjct: 1   MRSLVSHFDLAEKKHKIQELTSMTLQDDFWNDPQHAQTLIRQLNGIKDIVESYEKLNSAL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
                  +L  E+ D  I +        ++   +  + + LLS E D + A LE+H GAG
Sbjct: 61  IGLEETHDLLKEDYDDEIFELFEAEYLEMEKNFDDFEIKILLSHEYDHSSAILELHPGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTES DWA+ML RMY+RWAEK+ FK   L+   G+EAGIKS T L++G  AYG+LK E+G
Sbjct: 121 GTESCDWADMLYRMYSRWAEKKGFKVSVLDYLPGDEAGIKSVTFLVEGDMAYGYLKAEKG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+DS  RRHTSF+S+ V P  ++ IEIEI   D  ++T RASGAGGQH+N T
Sbjct: 181 VHRLVRISPFDSGGRRHTSFASLDVMPQFNNEIEIEIKPEDLIVETKRASGAGGQHINKT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVR+ H PTG+V  CQ  RSQH+N+ +A  +L+++LY+  ++++E      +  +   
Sbjct: 241 DSAVRMVHKPTGLVAICQNGRSQHENREEALRVLKSRLYQKMIEEQEARLAEIKGEQKAN 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            WG QIRSYV  PY MVKD RT+ E +    V+DGDLD F+ A L 
Sbjct: 301 EWGSQIRSYVFHPYSMVKDHRTSCETSDVQGVMDGDLDAFIFAYLK 346


>gi|28377601|ref|NP_784493.1| peptide chain release factor 2 [Lactobacillus plantarum WCFS1]
 gi|38258340|sp|Q88YL5|RF2_LACPL RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|28270434|emb|CAD63336.1| peptide chain release factor 2, C-terminal fragment [Lactobacillus
           plantarum WCFS1]
          Length = 357

 Score =  275 bits (702), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 170/347 (48%), Positives = 220/347 (63%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
             LGG FD D   + +     +  +P  W +   A+ ++ E   L       K++ D + 
Sbjct: 4   TTLGGRFDLDALNESIQENEARMAEPGFWDDQAAAQKVIDENNVLKGKYDTFKQLADEVG 63

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D  +  EL  EE D  +  E   + Q  + +++  +   LL G  D N+A LE+H GAGG
Sbjct: 64  DLAVAYELLSEEPDAEMQAEFETDFQHAEHDLQQYRLNLLLDGPYDRNNAILEIHPGAGG 123

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TESQDW  MLLRMYTRWA    FK E ++   G+EAGIKS TLLI G NAYG+L+ E+GV
Sbjct: 124 TESQDWGAMLLRMYTRWAASHNFKVETVDYQAGDEAGIKSVTLLISGHNAYGYLRSEKGV 183

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVRISP+D+  RRHTSF+S+ V P +DD+++++I   D +ID YRASGAGGQHVN T 
Sbjct: 184 HRLVRISPFDAAGRRHTSFASVDVMPELDDTVDVDIRPEDLKIDVYRASGAGGQHVNKTS 243

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VV  Q +RSQ +N+  A NMLRAKLYE E +K+ +     +  + +IG
Sbjct: 244 SAVRITHVPTGIVVASQAQRSQLQNRQTALNMLRAKLYEREEEKKAKERAAIQGEQMDIG 303

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYV  PY MVKD RTN E      V+DGDLD FM A L  K
Sbjct: 304 WGSQIRSYVFHPYTMVKDHRTNYESHHGQAVMDGDLDPFMDAYLQWK 350


>gi|229829544|ref|ZP_04455613.1| hypothetical protein GCWU000342_01640 [Shuttleworthia satelles DSM
           14600]
 gi|229791533|gb|EEP27647.1| hypothetical protein GCWU000342_01640 [Shuttleworthia satelles DSM
           14600]
          Length = 379

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 161/350 (46%), Positives = 234/350 (66%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
              L  +    D ++  Q++  LN + E P  W +   +   M+E + L + +    +++
Sbjct: 16  KEPLAEVTRALDLESKHQKIEELNREMEAPDFWNDADLSARKMKELKSLKDDVEIADKLK 75

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           + + +  +L+++A EEDD  ++ E    + ++K + E  + ++LLSGE D+N+A + +HA
Sbjct: 76  NSIEEIGMLMDMANEEDDADMVGEIRLMMDQMKEDFERVRIKTLLSGEFDANNAIVTLHA 135

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+ DW  ML RMYTRWA  + F+ E L+  DG+EAGIK+ T  + G NAYG+LK 
Sbjct: 136 GAGGTEACDWTAMLYRMYTRWAAAQGFEVEELDYLDGDEAGIKAVTFQVNGENAYGYLKS 195

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+++N +R TSFSS  V P ++  +++E+ + D RIDTYR+SGAGGQH+
Sbjct: 196 EKGVHRLVRISPFNANGKRQTSFSSCDVMPELEQDLDVEVKDEDIRIDTYRSSGAGGQHI 255

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SA+RITH PTG+VVQCQ ERSQH NK +A  ML+AKLY L++++++  A       
Sbjct: 256 NKTSSAIRITHFPTGIVVQCQNERSQHMNKDKAMQMLKAKLYMLKMEEQKAKAEGIRGEV 315

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           T+I WG QIRSYV QPY MVKDLRT  E  + S V+DGD++ F+ A L  
Sbjct: 316 TDIAWGNQIRSYVFQPYTMVKDLRTGEETGNVSAVMDGDINLFINAYLRW 365


>gi|294788774|ref|ZP_06754015.1| peptide chain release factor 2 [Simonsiella muelleri ATCC 29453]
 gi|294483256|gb|EFG30942.1| peptide chain release factor 2 [Simonsiella muelleri ATCC 29453]
          Length = 367

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 167/351 (47%), Positives = 243/351 (69%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+++   +    D+    +RL  +   +EDP LW +   A+ + +ER+ L+  +  +  +
Sbjct: 16  LAQRNRDIRDYMDYQGKKERLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTMDNL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ + DN  L+++ +EE+D         ++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ENGIADNRELIDMVVEENDTDGFAAIIADVADLETQMAALEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK + LE  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKLDILEEDDGEIAGINRATIRVEGKYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+D+N++RHTSF+S++VYP VDDSIEI+I+ +D RIDTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDANNKRHTSFASVFVYPEVDDSIEIDINPADLRIDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH PTG+VVQCQ +RSQH NKA A  MLR+KL+ELE++KR E     E  
Sbjct: 256 INKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLRSKLFELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L  
Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|71733798|ref|YP_276012.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|71554351|gb|AAZ33562.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. phaseolicola 1448A]
          Length = 368

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 184/351 (52%), Positives = 248/351 (70%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +   + G  D+D+   RL+ +N + EDP++W N   A+ L RER  L   +  + E+
Sbjct: 17  LSERSETIRGYLDYDHKHDRLTEVNRELEDPNVWNNPTYAQELGRERSLLAQIVETLDEM 76

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LL ++ EE+D + + + +  ++R++  +E  +F  + SGE D N+AYL++ 
Sbjct: 77  SSGLADAKDLLLMSAEEEDQAAVDDVAAEVERLRESLEKLEFRRMFSGEMDPNNAYLDIQ 136

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK AT+ IKG  A+GWL+
Sbjct: 137 AGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLR 196

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ SD RIDTYR+SGAGGQH
Sbjct: 197 TEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRSSGAGGQH 256

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRA+LYE E+QKR   +   E +
Sbjct: 257 VNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDT 316

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRTNIE++    VLDGD+D+++ A+L  
Sbjct: 317 KSDIGWGHQIRSYVLD-ASRIKDLRTNIERSDCDKVLDGDIDEYLIASLKQ 366


>gi|315924849|ref|ZP_07921066.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus
           ATCC 23263]
 gi|315621748|gb|EFV01712.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus
           ATCC 23263]
          Length = 369

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 183/352 (51%), Positives = 237/352 (67%), Gaps = 3/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +L  LG   D      RLS L T++EDP  W +   A+ +++E+  L    S   E+
Sbjct: 14  MDAELTALGKSMDLPAIDARLSALMTQSEDPAFWNDQKSAQKVLKEQTILKRKRSRYDEV 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L D  ++ ELA E +           L   + + E  + E LLSGE DSN+A + +H
Sbjct: 74  KEELDDVSVMYELAEEGEGMDE---LEQMLGAFQEKFEDFKLEMLLSGEYDSNNAIISLH 130

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA+MLLRMYTRWAE R +K + L+   G+ AGIKSATLLI+G NAYG+LK
Sbjct: 131 PGAGGTESHDWASMLLRMYTRWAEARGYKIKQLDYQPGDIAGIKSATLLIEGINAYGYLK 190

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DS+ RRHTSF+S+ V P VDDS+EIEI+  D R+DTYR+SGAGGQH
Sbjct: 191 TERGVHRLVRISPFDSSGRRHTSFASLDVTPEVDDSVEIEINPDDIRVDTYRSSGAGGQH 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T SA+RITH+PTGVVVQCQ ERSQH+N+  A NML++KL E+  Q+++E        
Sbjct: 251 VNKTSSAIRITHLPTGVVVQCQNERSQHQNREVAMNMLKSKLVEIMAQEQKEKLEDVVGD 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            ++I WG QIRSYV  PY MVKD RT +E  +   V+DGDLD FM A L  +
Sbjct: 311 YSQIAWGSQIRSYVFHPYTMVKDHRTGVEVGNIQTVMDGDLDRFMNAELRKE 362


>gi|163739752|ref|ZP_02147160.1| peptide chain release factor 2 [Phaeobacter gallaeciensis BS107]
 gi|163741027|ref|ZP_02148420.1| peptide chain release factor 2 [Phaeobacter gallaeciensis 2.10]
 gi|161386018|gb|EDQ10394.1| peptide chain release factor 2 [Phaeobacter gallaeciensis 2.10]
 gi|161386982|gb|EDQ11343.1| peptide chain release factor 2 [Phaeobacter gallaeciensis BS107]
          Length = 374

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 202/351 (57%), Positives = 251/351 (71%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  L    DW+ A  RL   N + EDP+LW +   A+ LMR+RQ L +AI   K I
Sbjct: 12  IEKSLELLAQRLDWETAEFRLEEFNARVEDPNLWDDADAAQALMRDRQMLVDAIDTYKSI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L DN+ L+EL   E+D  ++ +    L+ +K +   K+ E+LL GEADSND +LE++
Sbjct: 72  KQDLSDNMELIELGEMEEDAEVISDAEAALKTLKEKAAEKELEALLDGEADSNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMY RWAEK+ +K E      GEEAGIKSA   I G NAYGWLK
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGEEAGIKSAAYKISGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS ++RHTSFSS+WVYPVVDD+IEI+++ SD RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDSAAKRHTSFSSVWVYPVVDDNIEIDVNPSDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY+LEL +R    N    +
Sbjct: 252 VNTTDSAVRITHEPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQLELDRRNADINAAHEA 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K + GWG QIRSYVLQPYQMVKDLRT+ E +    VLDGDLD FM ATLA+
Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTKGVLDGDLDGFMAATLAL 361


>gi|320530290|ref|ZP_08031358.1| peptide chain release factor 2 [Selenomonas artemidis F0399]
 gi|320137433|gb|EFW29347.1| peptide chain release factor 2 [Selenomonas artemidis F0399]
          Length = 368

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 173/352 (49%), Positives = 233/352 (66%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L+ +    +     ++++ L  K  +P  W +   A+ + +E   L   +   K +
Sbjct: 12  LGEKLDQMRISLEIPAKEEKIAELEYKMSEPTFWDDAAAAQKVNQELAGLKGGVDTYKAL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D   L E+ +EE+D ++  +    L  I   +E  Q E LLSGE D+N+A L +H
Sbjct: 72  AAKYEDAETLYEMGIEENDPTMEGDIRAELDAIAEGLETLQLEVLLSGEYDANNAILTLH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDW  MLLRMY RWAE+  F  E  ++  G+EAG+KSA+L IKG NAYG+LK
Sbjct: 132 AGAGGTEAQDWTQMLLRMYGRWAERHGFSVETADLQPGDEAGVKSASLFIKGHNAYGFLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DS +RRHTSFS+  V P +DD++E++I   D R+D YRASGAGGQH
Sbjct: 192 SEKGVHRLVRISPFDSQARRHTSFSACDVMPEIDDAVEVDIDMDDVRVDYYRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T SAVR+TH PTG+VVQCQ ERSQ +NK Q   MLRAKL+ELE +K+EE     E  
Sbjct: 252 INKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCLKMLRAKLFELEQEKKEEELAKLEGV 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + +I WG QIRSYV QPY MVKD+RTN E  +   V+DG++D F++A L  K
Sbjct: 312 QQKIEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGEIDPFIRAYLNAK 363


>gi|293400349|ref|ZP_06644495.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium
           5_2_54FAA]
 gi|291306749|gb|EFE47992.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium
           5_2_54FAA]
          Length = 346

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 152/341 (44%), Positives = 209/341 (61%)

Query: 12  GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
             FD      ++  L  KT +   W +  +A++++R+   + + +     +Q  L     
Sbjct: 2   SHFDLTARRYKIQELTAKTLEESFWNDPQKAQVVIRQLNAIKDVVDSYDALQKALNSLDE 61

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EL  E+ D  I +      Q ++      + + LLS E D + A LE+H GAGGTES 
Sbjct: 62  TQELLKEDFDEEIFELFELEYQEMEKNFADFEIKVLLSHEYDHSSAILELHPGAGGTESC 121

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+ML RMY+RWAEK +FK   L+   G+EAGIKS T L++G  AYG+LK E+GVHRLV
Sbjct: 122 DWADMLYRMYSRWAEKHEFKVSVLDYQPGDEAGIKSITFLVEGDMAYGYLKAEKGVHRLV 181

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+D+  RRHTSF+S+ V P  +D IEIEI   D  ++T RASGAGGQH+N TDSAVR
Sbjct: 182 RISPFDAGGRRHTSFASLDVMPQFNDEIEIEIKPEDLIVETKRASGAGGQHINKTDSAVR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           + H PTG+V  CQ  RSQH+N+ +A  +L+++LY+  ++++E      +       WG Q
Sbjct: 242 MVHKPTGLVATCQNGRSQHENREEALRVLKSRLYQKMIEEQEAKLAEIKGEVKANEWGSQ 301

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IRSYV  PY MVKD RTN E +    V+DGDLD F+ A L 
Sbjct: 302 IRSYVFHPYSMVKDHRTNHETSDVQGVMDGDLDGFIFAYLK 342


>gi|288554120|ref|YP_003426055.1| peptide chain release factor 2 [Bacillus pseudofirmus OF4]
 gi|288545280|gb|ADC49163.1| peptide chain release factor 2 [Bacillus pseudofirmus OF4]
          Length = 328

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 166/323 (51%), Positives = 222/323 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +   A+ ++ E   L   ++   E++++  +  +  EL  EE D  + +E  
Sbjct: 1   MTAPDFWDDQEAAQTVINESNGLKEQVNVFLELEEKYENLEVSYELVKEEADEELEKELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +   +   + + LLS   D N+A LE+H GAGGTESQDWA+MLLRMYTRW+E+R 
Sbjct: 61  AGVKELISRLNDFELQLLLSEPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWSEQRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETMDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD++EI+I   D ++DTYRASGAGGQH+NTTDSA+RITH+PT  VV CQ ERSQ
Sbjct: 181 EVMPELDDNVEIDIRTEDLKVDTYRASGAGGQHINTTDSAIRITHLPTNTVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML+AKLY+LE++K+++        + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNRDQAMKMLKAKLYQLEIEKQQQELAEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E  + + V+DGDLD F+ A L 
Sbjct: 301 FEIGNTNAVMDGDLDGFINAYLR 323


>gi|291486081|dbj|BAI87156.1| hypothetical protein BSNT_05369 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 327

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 167/325 (51%), Positives = 218/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ ++ E   L + ++  K++ +   +  +  +L  EE D  +  E  
Sbjct: 1   MADPEFWNDQQKAQTVINEANGLKDYVNSYKKLNESHEELQMTHDLLKEEPDTDLQLELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L+ +  +    + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRW E+R 
Sbjct: 61  KELKSLTKDFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGERRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D I+I+I   D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ
Sbjct: 181 EVMPEFNDEIDIDIRAEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A  ML+AKLY+  +++++   +     + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 IKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGD+D F+ A L  K
Sbjct: 301 TEMGNVQAVMDGDIDTFIDAYLRSK 325


>gi|270290715|ref|ZP_06196939.1| peptide chain release factor 2 [Pediococcus acidilactici 7_4]
 gi|270280775|gb|EFA26609.1| peptide chain release factor 2 [Pediococcus acidilactici 7_4]
          Length = 343

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 165/328 (50%), Positives = 218/328 (66%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             K  +P  W +  +A+ ++ E   L       K + D + +  + LEL   E D  +  
Sbjct: 9   EAKMAEPDFWNDQEKAQKIINETNVLKAKYDNFKNLTDHVENLEVTLELLEMEADPDVQA 68

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E  D L +    +   +   LL+G+ D+N+A LE+H GAGGTESQDW +MLLRMYTRWAE
Sbjct: 69  EFEDELSQTAKLLRDYRLGLLLNGKYDANNAILEIHPGAGGTESQDWGSMLLRMYTRWAE 128

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           + +FK +  +   GE AGI S T+ + G NAYG+L+ E+GVHRLVR+SP+DS  RRHTSF
Sbjct: 129 QHQFKVQIEDYQAGEVAGISSVTIRVMGHNAYGYLRSEKGVHRLVRLSPFDSAGRRHTSF 188

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S+ V P +DDS+E+ I+  D R+D YR+SGAGGQH+N T SAVRITH+PTG+VV  Q E
Sbjct: 189 ASVDVMPELDDSVEVNINPDDLRVDVYRSSGAGGQHINKTSSAVRITHLPTGIVVASQAE 248

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQ +N+  A NML+AKL+ELE QK+ E     E ++ EIGWG QIRSYV  PY MVKD 
Sbjct: 249 RSQLQNRVTAMNMLKAKLFELEEQKKAEEKAKLEGTQLEIGWGSQIRSYVFHPYSMVKDH 308

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           RTN+E  +   V+DGDLDDF+ A L  K
Sbjct: 309 RTNLETANVQGVMDGDLDDFINAYLQWK 336


>gi|90409172|ref|ZP_01217287.1| putative peptide chain release factor 2 [Psychromonas sp. CNPT3]
 gi|90309717|gb|EAS37887.1| putative peptide chain release factor 2 [Psychromonas sp. CNPT3]
          Length = 349

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 173/342 (50%), Positives = 241/342 (70%), Gaps = 1/342 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D  V+RL  +  + E P +W +   A+ L +ER  L+  +  IK ++    + L
Sbjct: 6   GGIFDYDVKVERLEEVTRELESPEVWNDPERAQALGKERSALELIVETIKALEIGCDEIL 65

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           +L+ELA++E D     E ++    ++ ++E  +F  + SG+ DS   YL++ +G+GGTE+
Sbjct: 66  MLVELAVDEQDQDTFDEAANETLELEKKLEVLEFRRMFSGKNDSCSCYLDIQSGSGGTEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWANMLLRMY RW E   +KTE +E+  G+ AGIK AT+   G  AYGWL+ E GVHRL
Sbjct: 126 QDWANMLLRMYLRWGEANGYKTELMEVSAGDVAGIKGATIRFSGEYAYGWLRTETGVHRL 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS+ +RHTSF+S +VYP V+D+I+I I+ ++ RID YRASGAGGQHVNTT+SAV
Sbjct: 186 VRKSPFDSSGKRHTSFASAFVYPEVEDNIDIVINPAELRIDVYRASGAGGQHVNTTESAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH+PT +VVQCQ +RSQHKNK QA   L+AKLYE E+Q +     I E +K++IGWG 
Sbjct: 246 RITHLPTNIVVQCQNDRSQHKNKDQAMKQLKAKLYEHEVQIQNVEKQISEDNKSDIGWGS 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYVL     +KDLRT +E  +P  VLDG+L++F++A+L 
Sbjct: 306 QIRSYVLDD-ARIKDLRTGVESRNPQRVLDGELNEFIEASLK 346


>gi|260887225|ref|ZP_05898488.1| peptide chain release factor 2 [Selenomonas sputigena ATCC 35185]
 gi|260863287|gb|EEX77787.1| peptide chain release factor 2 [Selenomonas sputigena ATCC 35185]
          Length = 330

 Score =  274 bits (700), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 175/325 (53%), Positives = 227/325 (69%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N  EA+ + +E   +  ++   KEI  +  D   LLE+ALEE+D S+  E  
Sbjct: 1   MGEPTFWDNAEEAQKINQELAAIKGSVDKYKEIVSKTDDAQALLEMALEENDTSLEPEVQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + IK  V   + E LLSG  D+N+A L +HAGAGGTE+QDW  MLLRMY RWAE+  
Sbjct: 61  TEFETIKTAVRELELEVLLSGPYDANNAILTLHAGAGGTEAQDWTQMLLRMYGRWAERHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F     ++  G+EAG+KSATL I G NAYG+LK E+GVHRLVRISP+DSN+RRHTSFS+ 
Sbjct: 121 FSVVTADLLPGDEAGVKSATLFINGHNAYGYLKSEKGVHRLVRISPFDSNARRHTSFSAC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + P +DD++E+ I+ +D R+DTYRASGAGGQH+N T SAVR+TH+PTG+VVQCQ ERSQ
Sbjct: 181 DIMPEIDDAVEVAINMADVRVDTYRASGAGGQHINKTSSAVRMTHMPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+ Q   MLRAKL+ELE +K+E      E  + +I WG QIRSYV QPY MVKD+RT 
Sbjct: 241 LQNREQCMKMLRAKLFELEQEKKEAEIQKLEGDQQKIEWGSQIRSYVFQPYTMVKDMRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DGDLD F++A LA K
Sbjct: 301 METGNVQAVMDGDLDAFIEAFLAAK 325


>gi|205375066|ref|ZP_03227857.1| hypothetical protein Bcoam_18782 [Bacillus coahuilensis m4-4]
          Length = 327

 Score =  274 bits (700), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 170/325 (52%), Positives = 217/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ L+ E   L + +     + +   +  +  EL  EE D  +L E  
Sbjct: 1   MVDPDFWNDQQKAQGLINEANGLKDMVGQYHSMVEAHENLEVTFELVKEEGDEELLAELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L  +  ++   + + LLS E D N+A LE+H GAGGTESQDW +MLLRMYTRWAEK+ 
Sbjct: 61  PELNDLTKQLNNYELQLLLSEEYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLSIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D IEI+I   D +IDTYRASGAGGQH+NTTDSAVRITH+PT  VV CQ ERSQ
Sbjct: 181 EVMPEFNDEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNTVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+  A  ML++KLY+L+++++E         + +IGWG QIRSYV  PY MVKD RTN
Sbjct: 241 IKNREAAMKMLKSKLYQLKIEEQEAQLAEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  + + V+DGDLD F+ A L  +
Sbjct: 301 TEVGNTNSVMDGDLDVFIDAYLRSR 325


>gi|77463535|ref|YP_353039.1| peptide chain release factor 2 [Rhodobacter sphaeroides 2.4.1]
 gi|332558415|ref|ZP_08412737.1| peptide chain release factor 2 [Rhodobacter sphaeroides WS8N]
 gi|77387953|gb|ABA79138.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodobacter
           sphaeroides 2.4.1]
 gi|332276127|gb|EGJ21442.1| peptide chain release factor 2 [Rhodobacter sphaeroides WS8N]
          Length = 375

 Score =  274 bits (700), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 203/352 (57%), Positives = 245/352 (69%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + R L  LG   D + A  RL   +   ED +LW +   A+ LMRERQ L + +S  + I
Sbjct: 12  IRRSLALLGQRMDLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQLSTYRLI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN+ L+EL   E D  I+ E   +++ +      K+ E+LL GEAD ND +LE++
Sbjct: 72  DTGLRDNVELIELGEAEGDEEIVTEAEASIRALVETARAKELEALLDGEADGNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMY RWAE++ +K E      GEEAGIKSA   I GPNAYGWLK
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIEI  +D RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEIPANDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT +VV     +SQH+N+  A N L+A+LY+LEL KR    N    +
Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREAAMNALKARLYQLELDKRNAAINAQHEA 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K E GWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD FM+ATLA  
Sbjct: 311 KGEAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMQATLAQD 362


>gi|269469023|gb|EEZ80587.1| protein chain release factor B [uncultured SUP05 cluster bacterium]
          Length = 364

 Score =  274 bits (700), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 176/351 (50%), Positives = 238/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+++ + L    D +    RL  +  + E+P +W N  EA+ L +E+  L+         
Sbjct: 13  LTQRSSALSAHLDLEEKQGRLEEVLLEMENPDIWSNPDEAQALGQEKSKLELICQTFARA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LLE+A  E+D   +     +L  ++L +E  +FE + SGE D+N AYL++ 
Sbjct: 73  NSILEDAKELLEMAQSENDKDTVNSVIGDLNTVELSIEKLEFERMFSGELDANSAYLDIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +G+GGTE+QDWA M+LRMY RW EK KFK + +E+  GE AGIKSAT+   G  A+GWL+
Sbjct: 133 SGSGGTEAQDWAEMILRMYLRWGEKHKFKVKLMEVSAGEVAGIKSATIHFNGEYAFGWLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+++N +RHTSFSS++V P +DD+IEI I+ SD RIDTYRASGAGGQH
Sbjct: 193 SEIGIHRLVRKSPFNANGKRHTSFSSVFVSPEIDDNIEININPSDLRIDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+PT  VVQCQ  RSQH NK QA   L++KLYELE+Q+R +     E +
Sbjct: 253 VNKTESAVRITHLPTNTVVQCQDGRSQHANKDQAMKQLKSKLYELEMQERNKEKQDLEDT 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E T+  DVLDG+LD F++A+L  
Sbjct: 313 KSDIGWGHQIRSYVLD-QSRIKDLRTGVESTNTQDVLDGNLDKFIEASLKA 362


>gi|316940875|gb|ADU74909.1| Peptide chain release factor 2 [Clostridium thermocellum DSM 1313]
          Length = 375

 Score =  274 bits (700), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 166/349 (47%), Positives = 234/349 (67%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
            + L+ +G   D  +   ++  L  K  +P  W +   ++ ++++ + L + +    ++ 
Sbjct: 15  KQNLDEMGKSLDIASIGNQIEELEQKASEPDFWNDTENSQKILQKIKSLRSKVERYNKLV 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            +  D + L EL +EE D S++ E  +  +  K E E  + E+LL+G+ D N+A L +HA
Sbjct: 75  SQWEDLITLCELGIEEQDESVIPEAVEGFKAFKKEFEALRLETLLTGQYDKNNAILTLHA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDW  ML RMYTRWAEK+ F  + L+  DGEEAGIKS T  + G NAYG+LK 
Sbjct: 135 GAGGTEAQDWVQMLFRMYTRWAEKKGFTVKVLDYLDGEEAGIKSVTFQVIGENAYGFLKS 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+D++ RRHTSF+S+ V P ++D IE+ I+  D RIDTYR+SGAGGQH+
Sbjct: 195 EKGVHRLVRISPFDASGRRHTSFASLDVMPELNDDIEVHINPDDLRIDTYRSSGAGGQHI 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRITHIPTG+VV CQ ERSQ +NK  A  ML+AKL EL+ ++ +E     +  +
Sbjct: 255 NKTESAVRITHIPTGIVVSCQSERSQFQNKDTAMKMLKAKLMELKERENKEKIEDLKGIQ 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            EI WG QIRSYV  PY +VKD RTN E+ +   V+DG+LD F+ + L+
Sbjct: 315 LEIAWGSQIRSYVFCPYTLVKDHRTNYEEINVDAVMDGELDGFINSYLS 363


>gi|221311479|ref|ZP_03593326.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221315806|ref|ZP_03597611.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
           str. NCIB 3610]
 gi|221320721|ref|ZP_03602015.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
           str. JH642]
 gi|221325006|ref|ZP_03606300.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
           str. SMY]
 gi|321313075|ref|YP_004205362.1| peptide chain release factor 2 [Bacillus subtilis BSn5]
 gi|320019349|gb|ADV94335.1| peptide chain release factor 2 [Bacillus subtilis BSn5]
          Length = 327

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 168/325 (51%), Positives = 218/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ ++ E   L + ++  K++ +   +  +  +L  EE D  +  E  
Sbjct: 1   MADPEFWNDQQKAQTVINEANGLKDYVNSYKKLNESHEELQMTHDLLKEEPDTDLQLELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L+ +  E    + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRW E+R 
Sbjct: 61  KELKSLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGERRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D I+I+I   D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ
Sbjct: 181 EVMPEFNDEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A  ML+AKLY+  +++++   +     + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 IKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGD+D F+ A L  K
Sbjct: 301 TEMGNVQAVMDGDIDTFIDAYLRSK 325


>gi|56697430|ref|YP_167798.1| peptide chain release factor 2 [Ruegeria pomeroyi DSS-3]
 gi|56679167|gb|AAV95833.1| peptide chain release factor 2 [Ruegeria pomeroyi DSS-3]
          Length = 375

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 200/352 (56%), Positives = 248/352 (70%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  L    D + A  RL   N + EDP+LW N   A+ LMRERQ L +A+   K I
Sbjct: 12  IQKSLRLLAQRMDQETAQHRLEEFNARVEDPNLWDNPENAQKLMRERQTLVDALDIYKGI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L DN+ L+EL   EDD  ++++    L+ ++     K+ E+LL GEAD ND +LE++
Sbjct: 72  ETDLADNIELIELGEMEDDQDVIKDAEAALKALRERAAEKELEALLDGEADGNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMY RWAEK+ +K E      G+EAGIKSA   I G NAYGWLK
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGDEAGIKSAAYKISGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYD+ ++RHTSFSS+WVYPVVDD+IEIE++ SD RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDAAAKRHTSFSSVWVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV    E+SQH+N+  A   L+++LY+ EL +R    N    +
Sbjct: 252 VNTTDSAVRITHIPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQQELDRRNAEINAAHEA 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K + GWG QIRSYVLQPYQMVKDLRT  E +    VLDG LD FM ATLA+K
Sbjct: 311 KGDAGWGNQIRSYVLQPYQMVKDLRTGHETSDTKGVLDGALDGFMAATLAMK 362


>gi|114771120|ref|ZP_01448560.1| peptide chain release factor 2 [alpha proteobacterium HTCC2255]
 gi|114548402|gb|EAU51288.1| peptide chain release factor 2 [alpha proteobacterium HTCC2255]
          Length = 375

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 200/354 (56%), Positives = 262/354 (74%), Gaps = 1/354 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           +++ + L  L    DWD A  R+   +  +E+P LW N  +A+ LMRERQ L ++IS  K
Sbjct: 10  VEIHKSLELLKQRMDWDTAEHRMEEFDAMSENPDLWNNPEKAQKLMRERQMLSDSISNFK 69

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           E+   L DN+ L+EL   E+D  I++E  +N+  I+ E   ++ E+LL+GE DSND +L+
Sbjct: 70  ELSSNLQDNIELIELGEIEEDEVIIKEAENNILIIQQESAKQELEALLNGEVDSNDTFLQ 129

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           ++AGAGGTES DWANML RMY RWAE++ ++ + +E   G+EAGIKS T  IKG NAYGW
Sbjct: 130 INAGAGGTESCDWANMLARMYVRWAEQKGYQVDRMEESVGDEAGIKSVTYQIKGHNAYGW 189

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           +K E GVHRLVRISP+DSN++RHTSFSS+WVYPVVDD+I+IEI+ S+ R+DTYR+SGAGG
Sbjct: 190 MKSESGVHRLVRISPFDSNAKRHTSFSSVWVYPVVDDNIDIEINPSEIRVDTYRSSGAGG 249

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVNTTDSAVRITHIPT +VVQ   E+SQH+N+A     L+++LYELE++KR E      
Sbjct: 250 QHVNTTDSAVRITHIPTNIVVQSS-EKSQHQNRANCMAALKSRLYELEMRKRTEGIQEAH 308

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +K + GWG QIRSYVL PYQMVKDLRTN+E +    VL+GDLD FM ATLA+ 
Sbjct: 309 DNKGDAGWGNQIRSYVLHPYQMVKDLRTNVETSDSQGVLNGDLDMFMAATLALD 362


>gi|33596662|ref|NP_884305.1| peptide chain release factor 2 [Bordetella parapertussis 12822]
 gi|81579293|sp|Q7W8T4|RF2_BORPA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|33573363|emb|CAE37347.1| peptide chain release factor 2 [Bordetella parapertussis]
          Length = 367

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 170/350 (48%), Positives = 248/350 (70%), Gaps = 1/350 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           + +   L    D+D   +RL  +N + EDP +W +   A+ L RE++ L++ +  + E+ 
Sbjct: 17  AEREQALRRYLDYDAKSERLQVVNAELEDPAIWNDPKHAQDLGREKKSLEDVVETLTELG 76

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D+  L+ELAL + D + L+    ++ R + ++E  +F  + +  AD  + ++++ A
Sbjct: 77  SGLADSCELVELALADSDDATLEAIEHDVDRFQEKLETLEFRRMFANPADPLNCFVDIQA 136

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDWA+MLLR Y ++AE++ FK E LE  +G+ AG+KSAT+ I+G  A+G+L+ 
Sbjct: 137 GAGGTEAQDWASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFGYLRT 196

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS+  RHTSF+S++VYP VD+S E+E++ +D RIDTYRASGAGGQH+
Sbjct: 197 ETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRIDTYRASGAGGQHI 256

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N TDSAVRITH P+G+VVQCQ +RSQH+N+A+A  ML++KLYELE++ R       E SK
Sbjct: 257 NKTDSAVRITHAPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMTEQQKLEDSK 316

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           T++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 317 TDVGWGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQ 365


>gi|121535512|ref|ZP_01667321.1| peptide chain release factor 2 [Thermosinus carboxydivorans Nor1]
 gi|121305931|gb|EAX46864.1| peptide chain release factor 2 [Thermosinus carboxydivorans Nor1]
          Length = 332

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 169/326 (51%), Positives = 229/326 (70%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             K   P  W +  EA+ + +E   L ++IS  ++++ R  D   L +L ++E D S+  
Sbjct: 2   EHKMSAPDFWDDPAEAQKIAQEVTALKDSISQYQQLRSRHSDVAALWQLGMDEGDDSVYD 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E +  L+ +  ++E  +   LL+GE D+N+A L +HAGAGGTE+QDWA MLLRMY RWAE
Sbjct: 62  EVAAELRALAKDLEQLELTVLLTGEYDANNAILTLHAGAGGTEAQDWAQMLLRMYMRWAE 121

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           KR +K E L+   GEEAGIKSAT+ + G NAYG+LK E+GVHRLVRISP+D++ RRHTSF
Sbjct: 122 KRGYKVELLDALAGEEAGIKSATITVAGRNAYGYLKAEKGVHRLVRISPFDASGRRHTSF 181

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +++ V P +DD+ EI I+ +D +IDT+R+ GAGGQHVN T+SAVRITH+PTG+VVQCQ E
Sbjct: 182 AAVDVMPEIDDNTEIVINPADLKIDTFRSGGAGGQHVNKTESAVRITHLPTGIVVQCQSE 241

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQ +N+ QA  +LRAKL+ELE QKRE+  +        I WG QIRSYV  PY +VKD 
Sbjct: 242 RSQIQNREQAMRLLRAKLFELERQKREQKKSELAGDYQAIEWGSQIRSYVFHPYNLVKDH 301

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLA 352
           RTN E  +   V+DG++D F++A L 
Sbjct: 302 RTNAETGNVQAVMDGEIDLFIEAYLR 327


>gi|325266606|ref|ZP_08133283.1| peptide chain release factor RF2 [Kingella denitrificans ATCC
           33394]
 gi|324982049|gb|EGC17684.1| peptide chain release factor RF2 [Kingella denitrificans ATCC
           33394]
          Length = 367

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 165/351 (47%), Positives = 241/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+++   +    D+    +RL  +   +EDP LW +   A+ + +ER+ L+  +  ++ I
Sbjct: 16  LAQRNTDIRAYMDYQGKKERLEEVVGLSEDPELWNDPKRAQDIGKERKLLEGIVLTLENI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ + DN  L+++ +EE+D         ++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ENGIADNRELIDMVVEENDEDGFAAIVADVAGLEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA MLLRMY R+AE++ FK E +E  DGE AGI +AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLLRMYLRYAERKGFKVEVVEQDDGEIAGINNATIRLEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S++VYP VDDS E+EI+ +D R DTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEVDDSFEVEINPADVRTDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVR+THIPTG+VVQ Q  RSQH+N+     MLRAKL+ELE++KR E     E  
Sbjct: 256 INKTDSAVRMTHIPTGIVVQSQNSRSQHENRRVCEEMLRAKLFELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L  
Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|33592241|ref|NP_879885.1| peptide chain release factor 2 [Bordetella pertussis Tohama I]
 gi|33601278|ref|NP_888838.1| peptide chain release factor 2 [Bordetella bronchiseptica RB50]
 gi|81578745|sp|Q7VZ35|RF2_BORPE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|81580061|sp|Q7WK44|RF2_BORBR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|33571886|emb|CAE41402.1| peptide chain release factor 2 [Bordetella pertussis Tohama I]
 gi|33575713|emb|CAE32791.1| peptide chain release factor 2 [Bordetella bronchiseptica RB50]
          Length = 367

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 170/350 (48%), Positives = 247/350 (70%), Gaps = 1/350 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           + +   L    D+D   +RL  +N + EDP +W +   A+ L RE++ L++ +  + E+ 
Sbjct: 17  AEREQALRRYLDYDAKSERLQVVNAELEDPAIWNDPKHAQDLGREKKSLEDVVETLTELG 76

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D+  L+ELAL + D + L+    +  R + ++E  +F  + +  AD  + ++++ A
Sbjct: 77  SGLADSCELVELALADSDDATLEAIEHDADRFQEKLETLEFRRMFANPADPLNCFVDIQA 136

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDWA+MLLR Y ++AE++ FK E LE  +G+ AG+KSAT+ I+G  A+G+L+ 
Sbjct: 137 GAGGTEAQDWASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFGYLRT 196

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS+  RHTSF+S++VYP VD+S E+E++ +D RIDTYRASGAGGQH+
Sbjct: 197 ETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRIDTYRASGAGGQHI 256

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N TDSAVRITH P+G+VVQCQ +RSQH+N+A+A  ML++KLYELE++ R       E SK
Sbjct: 257 NKTDSAVRITHAPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMTEQQKLEDSK 316

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           T++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 317 TDVGWGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQ 365


>gi|187927990|ref|YP_001898477.1| hypothetical protein Rpic_0895 [Ralstonia pickettii 12J]
 gi|238691788|sp|B2U8V1|RF2_RALPJ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|187724880|gb|ACD26045.1| conserved hypothetical protein [Ralstonia pickettii 12J]
          Length = 367

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 172/351 (49%), Positives = 248/351 (70%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + L    D+D   +RL  ++ + E+P +W +   A+ L RE++ L+  +  + ++
Sbjct: 16  LKSRADDLRRYLDYDVKSERLVEVDKELENPEVWNDPKRAQELGREKKSLETVVLALTKL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L     L ELA EE D   ++    +   ++  VE  +F  + SG  D+ + ++++ 
Sbjct: 76  DEDLTGAAELFELAREEGDDETIEAIEADTAGMRAIVEDMEFRRMFSGPMDAANCFIDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y ++ E++ FKTE LE  +G+ AGIKSA++ ++G  A+G+L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASIKVEGEYAFGFLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS   RHTSFSSI+VYP VDDSIEIE++ +D R+DTYRASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITHIPTG+VVQCQ +RSQH+N+A+A  ML+++LYE EL+KR+  A+  E++
Sbjct: 256 INKTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAAADAQEAA 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 316 KTDVGWGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQ 365


>gi|282882039|ref|ZP_06290680.1| peptide chain release factor 2 [Peptoniphilus lacrimalis 315-B]
 gi|300814941|ref|ZP_07095169.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 836
           str. F0141]
 gi|281298069|gb|EFA90524.1| peptide chain release factor 2 [Peptoniphilus lacrimalis 315-B]
 gi|300510911|gb|EFK38183.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 836
           str. F0141]
          Length = 370

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 176/347 (50%), Positives = 234/347 (67%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
             L+ L    D +    ++  LN K  + + W +  +A+ +++E       ++   EI D
Sbjct: 17  SSLDELALSLDVNGLRDKIKELNKKQMEQNFWDDNEKAQKIIKELNSYQRKVNPYDEISD 76

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
            + D   +L L   EDD S   E    +  I+ +V   + E+LL+GE D NDA L +HAG
Sbjct: 77  LIEDANDILLLMEMEDDYSSYDEFKKLILNIEKKVSEYKLETLLNGEFDENDAILSIHAG 136

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGGTE+QDWA+MLLRMY R+A  + FK E L+I   +EAGIKS TL I G +AYG+LKGE
Sbjct: 137 AGGTEAQDWASMLLRMYVRYATNKGFKVETLDILKEDEAGIKSVTLKISGEHAYGFLKGE 196

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           +GVHRLVRISP+D+N RRHTSFSS+ V+P +D  I+IEI + D +IDTYR+SGAGGQHVN
Sbjct: 197 KGVHRLVRISPFDANKRRHTSFSSVDVFPDIDGDIDIEIKDEDLKIDTYRSSGAGGQHVN 256

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRITHIPTG+VVQCQ ERSQ +N+ +A   L+AKL  L  ++R+E  +  + + +
Sbjct: 257 TTDSAVRITHIPTGIVVQCQNERSQIQNRERAMQTLKAKLLALAEEERKEKIDDLQGNYS 316

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +I WG QIRSYV QPY +VKD RTN E    + V+DGDLD F+ A L
Sbjct: 317 QIAWGSQIRSYVFQPYTLVKDHRTNCEVGDVNKVMDGDLDPFINAYL 363


>gi|15606882|ref|NP_214263.1| peptide chain release factor 2 [Aquifex aeolicus VF5]
 gi|6225943|sp|O67695|RF2_AQUAE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|2984119|gb|AAC07656.1| peptide chain release factor RF-2 [Aquifex aeolicus VF5]
          Length = 373

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 164/353 (46%), Positives = 248/353 (70%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L ++L  +  +   +     L  L+ K  +P+ W++  +AK +++ R+ ++  ++ +K 
Sbjct: 12  ELRKRLEDVKKILSPEKLESELKELDQKMSEPNFWEDQEKAKQVIQRRKWVEETLNKLKN 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  + D   L+E+  EED  +        ++ ++  +   + ++ LSGE D+ +AYL +
Sbjct: 72  LEKSVKDLEELVEITSEEDTETWAMMDE-EIKEVERTLRELELKTYLSGEMDAKNAYLTI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGTE+ DWA+ML RMY RWAEK+ ++ E ++I   + AGIKS T+L+KGP AYG+L
Sbjct: 131 QAGAGGTEACDWADMLFRMYKRWAEKKGYEVELIDITPDDVAGIKSVTVLVKGPYAYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGEQGVHRLVRISP+D+N+RRHTSF+++ V P +D+ I+IEI   D +I+T+RASGAGGQ
Sbjct: 191 KGEQGVHRLVRISPFDANARRHTSFAAVSVMPQIDEDIKIEIKPEDLKIETFRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN TD+AVRITHIPTG+ V CQQERSQ++NK +A  +L+AKLY+LE++K EE     E 
Sbjct: 251 YVNKTDTAVRITHIPTGITVSCQQERSQYQNKRKALELLKAKLYQLEMKKLEEKKKQYEG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            KT+IGWG QIRSYV  PY+++KDLRT  E  +   V+DG++D+F+++ L  K
Sbjct: 311 EKTDIGWGHQIRSYVFHPYKLIKDLRTGYETGNVEAVMDGEIDEFIESYLKWK 363


>gi|329120730|ref|ZP_08249392.1| peptide chain release factor RF2 [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327460527|gb|EGF06863.1| peptide chain release factor RF2 [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 417

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 168/351 (47%), Positives = 237/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+    +RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 66  LEQRSAAIRSYMDYQGKKERLEEVIGLSEDPELWNDPKRAQEIGKERKLLEGVVLTLDNI 125

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+E+A+EE+D         ++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 126 GGGIEDNRMLIEMAVEENDEDGFAAIESDVAELESQMAGLEFKRMFNQPADHNNCFVDIT 185

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA ML RMY+R+AE++ FK E +E  DGE AGI  ATL ++G  AYG L+
Sbjct: 186 AGAGGTEAEDWAGMLFRMYSRYAERKGFKLEIIEEDDGEIAGINRATLRVEGEYAYGLLR 245

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S++VYP VDDS EIEI+ +D R DTYRASGAGGQH
Sbjct: 246 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEVDDSFEIEINPADLRTDTYRASGAGGQH 305

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITHIPTG+VVQ Q  RSQH+N+     MLR+KL+ELE++KR E     E  
Sbjct: 306 INKTDSAVRITHIPTGIVVQSQSSRSQHENRRIVMEMLRSKLFELEMRKRNEEKQALEEG 365

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K ++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L  
Sbjct: 366 KADVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 415


>gi|260427583|ref|ZP_05781562.1| peptide chain release factor 2 [Citreicella sp. SE45]
 gi|260422075|gb|EEX15326.1| peptide chain release factor 2 [Citreicella sp. SE45]
          Length = 397

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 191/353 (54%), Positives = 242/353 (68%), Gaps = 2/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + L+ LG   DW+ A  RL   N + EDP+LW +   A+ LMR+RQ L +A+     
Sbjct: 35  KIEKSLDLLGQRLDWETAPHRLEEFNARVEDPNLWDDPQAAQKLMRDRQMLVDAMETYSS 94

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L DN+ L+E+   E+D  ++ E    L+ +  +   K+ E+LL GEAD ND +LE+
Sbjct: 95  IKQELSDNVELIEMGEMEEDDEVVSEAEAALRALAEKAGQKELEALLDGEADGNDTFLEI 154

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTE+ DWA ML RMY RWAEKR +  E      G EAG KS    I G NAYGWL
Sbjct: 155 NAGAGGTEACDWAAMLQRMYVRWAEKRGYDVELQFEEAGAEAGTKSCGYKISGTNAYGWL 214

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+   +R  TSF+S+WVYPVVDD+IEI+++ SD RIDTYR+SGAGGQ
Sbjct: 215 KSESGVHRLVRISPFGKGTR-ETSFASVWVYPVVDDNIEIDVNPSDIRIDTYRSSGAGGQ 273

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPT +VV    E+SQH+N+  A   L+++LY++EL KR    N    
Sbjct: 274 HVNTTDSAVRITHIPTNIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDKRNAEINAQHE 332

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +K + GWG QIRSYVLQPYQMVKDLRT+ E +    VLDGDLD FM ATLA +
Sbjct: 333 AKGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTQGVLDGDLDPFMAATLAQQ 385


>gi|313895325|ref|ZP_07828882.1| peptide chain release factor 2 [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|312976220|gb|EFR41678.1| peptide chain release factor 2 [Selenomonas sp. oral taxon 137 str.
           F0430]
          Length = 368

 Score =  273 bits (698), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 234/352 (66%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L+ +    +     ++++ L  K  +P  W +   A+ + +E   L   +   K +
Sbjct: 12  LGEKLDQMRISLEIPAKEEKIAELEYKMSEPTFWDDAAAAQKVNQELAGLKGGVDTYKAL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D   L E+ +EE+D S+ ++    L  I   +E  Q E LLSGE D+N+A L +H
Sbjct: 72  AAKYEDAETLYEMGIEENDPSMERDIRAELDLIAEGLETLQLEVLLSGEYDANNAILTLH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDW  MLLRMY RWAE+  F  E  ++  G+EAG+KSA+L IKG NAYG+LK
Sbjct: 132 AGAGGTEAQDWTQMLLRMYGRWAERHGFTVETADLQPGDEAGVKSASLFIKGHNAYGFLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DS +RRHTSFS+  V P +DD++E++I   D R+D YRASGAGGQH
Sbjct: 192 SEKGVHRLVRISPFDSQARRHTSFSACDVMPEIDDAVEVDIDMDDVRVDYYRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T SAVR+TH PTG+VVQCQ ERSQ +NK Q   MLRAKL+ELE +K+EE     E  
Sbjct: 252 INKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCLKMLRAKLFELEQEKKEEELAKLEGV 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + +I WG QIRSYV QPY MVKD+RTN E  +   V+DG++D F++A L  K
Sbjct: 312 QQKIEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGEIDPFIRAYLNAK 363


>gi|126652452|ref|ZP_01724624.1| peptide chain release factor 2 [Bacillus sp. B14905]
 gi|126590723|gb|EAZ84838.1| peptide chain release factor 2 [Bacillus sp. B14905]
          Length = 328

 Score =  273 bits (698), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 170/326 (52%), Positives = 224/326 (68%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              +P  W +   A++++ E   L   ++  KE+++   +  + LEL  EE D  + +E 
Sbjct: 1   MMLEPGFWDDQQGAQVIINEGNGLKAIVNEYKELEEIHENLDMTLELLREEPDEELQEEL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              L   + ++   + + LLSG  D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR
Sbjct: 61  GKELVEFQQKMADFELQLLLSGPYDQNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E ++   G+EAGIKS T+ IKG NA+G+L+ E+GVHRLVRISP+DS+ RRHTSF S
Sbjct: 121 GFKVETMDYLPGDEAGIKSVTISIKGHNAFGYLQAEKGVHRLVRISPFDSSGRRHTSFVS 180

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
             V P  D++IEI+I   D +IDTYRA+GAGGQH+NTTDSAVRITHIPTG VVQCQ ERS
Sbjct: 181 CDVMPEFDENIEIDIRTEDLKIDTYRATGAGGQHINTTDSAVRITHIPTGTVVQCQAERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q KN+ +A  ML+ KLY+LEL+K++   +     + +IGWG QIRSYV  PY MVKD RT
Sbjct: 241 QIKNREKAMAMLKGKLYQLELEKQQAQLDEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
           N E  +   V+DGD+D F+ A L  +
Sbjct: 301 NEETGNVGAVMDGDVDPFINAYLRSR 326


>gi|50086456|ref|YP_047966.1| peptide chain release factor 2 [Acinetobacter sp. ADP1]
 gi|49532432|emb|CAG70144.1| peptide chain release factor 2 [Acinetobacter sp. ADP1]
          Length = 337

 Score =  273 bits (698), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 174/335 (51%), Positives = 235/335 (70%), Gaps = 1/335 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             +RL  +  + EDP +W +   A+ + +E+  L+N ++ +  + ++L D   +L+LA+E
Sbjct: 2   KKERLEEVLRELEDPAIWNDQSRAQAMAKEKGELENVLNVLDNLAEQLEDAKAMLDLAVE 61

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
            DD S+L +    L   + E+   +F  + S   D N  Y+E+ AG+GGTE+QDWA+MLL
Sbjct: 62  ADDESLLVDVESELATAEDELAKLEFRRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLL 121

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RW E+  FK E +E  DG+ AGIKSAT+ ++G  AYGWL+ E GVHRLVR SP+DS
Sbjct: 122 RMYMRWIERHGFKAELMEESDGDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDS 181

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
            +RRHTSFS+++V P +DD+IEIEI+ +D R DTYRASGAGGQH+N TDSAVR+TH PTG
Sbjct: 182 GNRRHTSFSAVFVSPEIDDNIEIEINPADVRTDTYRASGAGGQHINKTDSAVRLTHAPTG 241

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV CQ +RSQH N+  AW  LRAKLYELE+ KR E A   E SK++IGWG QIRSYVL 
Sbjct: 242 IVVACQNQRSQHANRDHAWKQLRAKLYELEMSKRNEAAQALEDSKSDIGWGSQIRSYVLD 301

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
               +KDLRT +E ++   VLDGDLD F++A+L  
Sbjct: 302 D-SRIKDLRTGVENSNTGAVLDGDLDKFIEASLKQ 335


>gi|299535985|ref|ZP_07049304.1| peptide chain release factor 2 [Lysinibacillus fusiformis ZC1]
 gi|298728590|gb|EFI69146.1| peptide chain release factor 2 [Lysinibacillus fusiformis ZC1]
          Length = 328

 Score =  273 bits (698), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 173/326 (53%), Positives = 222/326 (68%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              +P  W +   A++++ E   L   ++  K++ +   +  + LEL  EE D  + +E 
Sbjct: 1   MMLEPGFWDDQQGAQVIINEGNGLKAIVNEYKDLVETHENLDMTLELLREEPDEELQEEL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              L   + ++   + + LLSG  D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR
Sbjct: 61  GKELAEFQQKMADFELQLLLSGPYDQNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E ++   G+EAGIKS TL IKG NA+G+L+ E+GVHRLVRISP+DS+ RRHTSF S
Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLSIKGHNAFGYLQAEKGVHRLVRISPFDSSGRRHTSFVS 180

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
             V P  DD+IEI+I   D +IDTYRA+GAGGQH+NTTDSAVRITHIPTG +VQCQ ERS
Sbjct: 181 CDVMPEFDDNIEIDIRTEDLKIDTYRATGAGGQHINTTDSAVRITHIPTGTIVQCQAERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q KN+ +A  ML+ KLY+LEL K++   +     + EIGWG QIRSYV  PY MVKD RT
Sbjct: 241 QIKNREKAMTMLKGKLYQLELDKQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
           N E  +   V+DGDLD F+ A L  K
Sbjct: 301 NEETGNVGAVMDGDLDPFINAYLRSK 326


>gi|238926688|ref|ZP_04658448.1| peptide chain release factor RF2 [Selenomonas flueggei ATCC 43531]
 gi|238885445|gb|EEQ49083.1| peptide chain release factor RF2 [Selenomonas flueggei ATCC 43531]
          Length = 368

 Score =  273 bits (698), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 175/352 (49%), Positives = 232/352 (65%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L+ +    +     ++++ L  K  +P  W +   A+ L +E   L   +   K +
Sbjct: 12  LGEKLDQMRISLEIPAKEEKIAELEYKMGEPSFWDDAAAAQKLNQELADLKGGVDTYKGL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D   L E+ +EE D S+  +    L  I   +E  Q E LLSG+ D+N+A L +H
Sbjct: 72  MAKYEDAETLYEMGIEEGDASMEDDIRAELDLITEGLETLQLEVLLSGDYDANNAILTLH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDW  MLLRMY RWAE+  F  E  ++  G+EAG+KSATL IKG NAYG+LK
Sbjct: 132 AGAGGTEAQDWTQMLLRMYGRWAERHGFAVETADLQPGDEAGVKSATLFIKGHNAYGFLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DS +RRHTSFS+  V P +DD++E+ I+  D R+D YRASGAGGQH
Sbjct: 192 SEKGVHRLVRISPFDSQARRHTSFSACDVMPEIDDAVEVPINMDDVRVDYYRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T SAVR+TH PTG+VVQCQ ERSQ +NK Q   MLRAKL+ELE +K+EE     E  
Sbjct: 252 INKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCMKMLRAKLFELEQEKKEEEIAKLEGV 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + +I WG QIRSYV QPY MVKD+RTN E  +   V+DG++D F++A L  K
Sbjct: 312 QQKIEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGEIDPFIRAYLNAK 363


>gi|241662572|ref|YP_002980932.1| hypothetical protein Rpic12D_0960 [Ralstonia pickettii 12D]
 gi|240864599|gb|ACS62260.1| conserved hypothetical protein [Ralstonia pickettii 12D]
          Length = 367

 Score =  273 bits (698), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 173/351 (49%), Positives = 248/351 (70%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + L    D+D   +RL  ++ + E+P +W +   A+ L RE++ L+  +  + ++
Sbjct: 16  LKSRADDLRRYLDYDVKSERLVEVDKELENPEVWNDPKRAQELGREKKSLETVVLALTKL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L     L ELA EE D   ++    +   ++  VE  +F  + SG  D+ + ++++ 
Sbjct: 76  DEDLTGAAELFELAREEGDDETIEAIEADTAGMRAIVEDMEFRRMFSGPMDAANCFIDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLR Y ++ E++ FKTE LE  +G+ AGIKSA++ ++G  A+G+L+
Sbjct: 136 AGAGGTEACDWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASIKVEGEYAFGFLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS   RHTSFSSI+VYP VDDSIEIEI+ +D R+DTYRASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEINPADLRVDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITHIPTG+VVQCQ +RSQH+N+A+A  ML+++LYE EL+KR+  A+  E++
Sbjct: 256 INKTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAAADAQEAA 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 316 KTDVGWGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQ 365


>gi|304437837|ref|ZP_07397786.1| peptide chain release factor RF2 [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|304369194|gb|EFM22870.1| peptide chain release factor RF2 [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 368

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 177/352 (50%), Positives = 232/352 (65%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L+ +    +     ++++ L  K  +P  W +   A+ L +E   L   +   K +
Sbjct: 12  LGEKLDQMRISLEIPAKEEKIAELEYKMGEPSFWDDAAAAQKLNQELAALKGGVDTYKGL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D   L E+ +EE D S+  +    L  I   +E  Q E LLSG+ D+NDA L +H
Sbjct: 72  MAKYEDAETLYEMGIEEGDASMEDDIRAELDLIAEGLETLQLEVLLSGDYDANDAILTLH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDW  MLLRMY RWAE+  F  E  ++  G+EAG+KSATL IKG NAYG+LK
Sbjct: 132 AGAGGTEAQDWTQMLLRMYGRWAERHGFTVETADLQPGDEAGVKSATLFIKGHNAYGFLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DS +RRHTSFS+  V P +DD++E+ I+  D R+D YRASGAGGQH
Sbjct: 192 SEKGVHRLVRISPFDSQARRHTSFSACDVMPEIDDAVEVPINMDDVRVDYYRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T SAVR+TH PTG+VVQCQ ERSQ +NK Q   MLRAKL+ELE +K+EE     E  
Sbjct: 252 INKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCMKMLRAKLFELEQEKKEEEIAKLEGV 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + +I WG QIRSYV QPY MVKD+RTN E  +   V+DG+LD F++A L  K
Sbjct: 312 QQKIEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGELDPFIRAYLNAK 363


>gi|296330264|ref|ZP_06872745.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305676131|ref|YP_003867803.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii
           str. W23]
 gi|296152532|gb|EFG93400.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305414375|gb|ADM39494.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 327

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 168/325 (51%), Positives = 218/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ ++ E   + + ++  K++ D   +  +  +L  EE D  +  E  
Sbjct: 1   MADPEFWNDQQKAQTVINEANGIKDYVNSYKKLNDSHEELQMTHDLLKEEPDSDLQLELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L+ +  E    + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRW E+R 
Sbjct: 61  KELKSLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGERRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D I+I+I   D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ
Sbjct: 181 EVMPEFNDEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A  ML+AKLY+  +++++   +     + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 IKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGD+D F+ A L  K
Sbjct: 301 TEMGNVQAVMDGDIDTFIDAYLRSK 325


>gi|168333703|ref|ZP_02691956.1| peptide chain release factor 2 [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 349

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 174/345 (50%), Positives = 230/345 (66%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G LFD  +  ++++ L T +  P  WQN   A+ +++E +     IS  K++ +   D L
Sbjct: 4   GDLFDVTHVQEQITELETISATPDFWQNSKYAQSVLQEXKDYKEIISKYKKLCNMYEDVL 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           +L+++ +EE D  +  E   +        +  +  +LL GE D NDA + +HAGAGGTE+
Sbjct: 64  VLIDMGIEEHDADMCAEAISDANSFIEFYDNLRTSTLLDGEYDKNDAIISLHAGAGGTEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DW NMLLRMYTRWAEK  FK++ L+I DGEEAG+KSATL I G NAYG+LK E+G+HRL
Sbjct: 124 CDWNNMLLRMYTRWAEKHGFKSKLLDILDGEEAGVKSATLEISGQNAYGYLKSEKGIHRL 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+DS  RRHTSF+S+ V P +DD+ EI I+  D +IDTYR+SGAGGQHVNTTDSAV
Sbjct: 184 VRISPFDSGGRRHTSFASLDVMPKIDDTAEITINPEDLQIDTYRSSGAGGQHVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH P+G+VVQCQ ERSQ +N+     ML +KL   + Q++    +     K +I WG 
Sbjct: 244 RITHKPSGIVVQCQNERSQIQNRETCMKMLASKLLYKQHQEQLLKIDEIRGEKKDIAWGS 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           QIRSYV  PY MVKD RTN E  +   V+DGD+D F+ A LA  K
Sbjct: 304 QIRSYVFHPYNMVKDHRTNQETGNTGAVMDGDIDAFVNAYLAWLK 348


>gi|327441322|dbj|BAK17687.1| protein chain release factor B [Solibacillus silvestris StLB046]
          Length = 328

 Score =  273 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 171/325 (52%), Positives = 220/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W +   A+ ++ E   +   ++  KE+ D   +  + LEL  EE D  + +E  
Sbjct: 1   MLEPEFWNDQNGAQAIINESNGIKAVVNEYKELVDTQENLEMTLELLREEPDEELQEEIG 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L   + ++E  + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR 
Sbjct: 61  KELAEFQTKMEEFELQMLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK   ++   G+EAGIKS TL I G NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVTTIDYLPGDEAGIKSVTLQISGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D IEI+I   D ++DTYRA+GAGGQH+NTTDSAVRITH+PTGVVVQCQ ERSQ
Sbjct: 181 DVMPEFNDEIEIDIRTEDLKVDTYRATGAGGQHINTTDSAVRITHLPTGVVVQCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+  A  ML++KLY+LE++K++   +     + EIGWG QIRSYV  PY MVKD RT+
Sbjct: 241 IKNRDAAMKMLKSKLYQLEIEKQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTS 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  K
Sbjct: 301 AETGNVGAVMDGDLDIFITAYLRSK 325


>gi|260892371|ref|YP_003238468.1| PE-PGRS family protein [Ammonifex degensii KC4]
 gi|260864512|gb|ACX51618.1| PE-PGRS family protein [Ammonifex degensii KC4]
          Length = 377

 Score =  273 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 165/352 (46%), Positives = 236/352 (67%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +L  L    D     +RL+ L  + E P  W+++  A+ + +E   L   +     +
Sbjct: 12  LAERLKYLEDSLDLAQKEKRLALLEKEMEAPDFWRDLARAQAVTQEVASLRQCLGRFYRL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++   +  +LLELA EE D  +L E + +++++  E+E  + E LLSG  D+++A + +H
Sbjct: 72  REGHEELSVLLELAAEEGDAQVLAELAQDVKKLAGEIEDLEVELLLSGPYDASNAIVSLH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGT++QDW  MLLRMY RWAE   ++   L++  GEEAGIKS T  + GP AYG+LK
Sbjct: 132 AGAGGTDAQDWVAMLLRMYARWAEAHGYRIRTLDLLTGEEAGIKSVTFEVIGPRAYGYLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRL+RISP+D++ RRHTSF+S+ V P V D  EI+I+  + RIDT+RASGAGGQH
Sbjct: 192 AERGVHRLIRISPFDASGRRHTSFASVDVLPAVKDDTEIKIAPEELRIDTFRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T++AVRITH+PTG+ V CQ ERSQ  NKA A  +LRA+L +L++++RE+        
Sbjct: 252 VNKTETAVRITHLPTGITVTCQSERSQSANKAAAMEILRARLLDLKIKEREKELAALRGE 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             EI WG QIR+YVL PY +VKD RT +E+     VLDGD+DDF++A L ++
Sbjct: 312 VKEIAWGNQIRTYVLHPYTLVKDHRTGVERRDIQAVLDGDIDDFIRAYLKVE 363


>gi|241895046|ref|ZP_04782342.1| peptide chain release factor 2 [Weissella paramesenteroides ATCC
           33313]
 gi|241871764|gb|EER75515.1| peptide chain release factor 2 [Weissella paramesenteroides ATCC
           33313]
          Length = 396

 Score =  273 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 159/352 (45%), Positives = 223/352 (63%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S ++   G   D D     ++    K  +P  WQ+ + A+ ++ E   L        ++
Sbjct: 38  MSAEIEKFGDSLDLDALNDEIAANEAKMVEPDFWQDNVAAQKIIDENNVLKGRRDDYLKL 97

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + + +    ++L  E  D  +  E +D+L ++  ++   +   LL+   D N+A LE+H
Sbjct: 98  ANGVENVEAAIDLLSELYDEDMATEMADDLDKLSEDLSAYRLAQLLNEPYDKNNAILEIH 157

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            G+GGTES DW   L RMYTRWAE+  FK + ++ H G+ AG+ S TL+I G NAYG+L+
Sbjct: 158 PGSGGTESADWGANLQRMYTRWAEQHGFKVDIMDYHPGDVAGVDSVTLMITGHNAYGYLR 217

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHR VRISP+DS  RRHTSF SI V P +DDS+E++I+ +D ++D YRASGAGGQH
Sbjct: 218 SERGVHRFVRISPFDSAGRRHTSFVSIDVMPELDDSVEVDINPADVKMDVYRASGAGGQH 277

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T SAVR+THIPTG+VV  QQ+RSQ +NK  A+ MLRAKLY+LE+ K+E+        
Sbjct: 278 INKTSSAVRLTHIPTGIVVASQQQRSQFQNKDTAYAMLRAKLYQLEMDKKEKERAAIAGD 337

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             E GWG QIRSYV QPY+MVKD R   E  +P  V+DGDLD F+ A L  +
Sbjct: 338 HLENGWGSQIRSYVFQPYRMVKDHRDGFESGNPQAVMDGDLDPFINAYLRWR 389


>gi|323703031|ref|ZP_08114687.1| peptide chain release factor 2 [Desulfotomaculum nigrificans DSM
           574]
 gi|323532044|gb|EGB21927.1| peptide chain release factor 2 [Desulfotomaculum nigrificans DSM
           574]
          Length = 326

 Score =  273 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 160/326 (49%), Positives = 215/326 (65%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
                 W N   ++ + ++   L + +     ++    D  ++LEL  EE+D  +  E  
Sbjct: 1   MTQEGFWDNTEHSQQVTQKLALLKDKVEAFNSLESAYQDLEVMLELCNEEEDPLLDDELK 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L  +   V   + E +LSG  D NDA L +HAGAGGTESQDW  MLLRM+TR+ E   
Sbjct: 61  SDLASLTKRVADMELEVMLSGPYDRNDAILSLHAGAGGTESQDWVQMLLRMFTRYCENHN 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K E L++  G+EAG+KSAT+ + GPNAYG+LK E+GVHRLVRISP+D+  RRHTSF+S+
Sbjct: 121 YKVEVLDLLPGDEAGVKSATIQVSGPNAYGYLKSEKGVHRLVRISPFDAAGRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V PVVDD +E+ I   D +IDTYR+ GAGGQHVN TDSAVRITH+PTG+VV CQ ERSQ
Sbjct: 181 DVLPVVDDEVEVNIRPEDLKIDTYRSGGAGGQHVNKTDSAVRITHLPTGIVVACQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             N+A A  +L+AKL +LEL+K+EE        + +I WG QIRSYV  PY +VKD RT 
Sbjct: 241 TYNRAAAMKLLKAKLIDLELRKKEEELAALRGDQKDIAWGSQIRSYVFHPYSLVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355
           +E  +   V+DG +D+F+ A L  K+
Sbjct: 301 VEVGNVYAVMDGAIDEFIAAYLKQKR 326


>gi|56551094|ref|YP_161933.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|241761334|ref|ZP_04759422.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|260753249|ref|YP_003226142.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|56542668|gb|AAV88822.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|241374241|gb|EER63738.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|258552612|gb|ACV75558.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 375

 Score =  273 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 206/352 (58%), Positives = 266/352 (75%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +   L  L    DWD A++RL  LN + EDP LW +   A+ +MRER  LD +I+  + I
Sbjct: 12  IQESLALLRRFLDWDRALRRLDELNARVEDPSLWDDARAAQEVMRERGRLDESIAATRAI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L +N+ L+E+A  E +  ++Q+    L+ +    +  + ++LLSGEAD ND Y+EV+
Sbjct: 72  ATELQENIELIEMAEAEGEEEMVQDAISALESLAERADRDKVKALLSGEADGNDTYIEVN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTESQDWA ML RMY RWAE++ FK E ++ H GE+AGIKSATLL+KG +AYG+ K
Sbjct: 132 AGAGGTESQDWAEMLSRMYQRWAERQGFKVELVDYHAGEQAGIKSATLLVKGESAYGYAK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DSN+RRHTSF+S+ VYPVVDD I+IE+ + D +IDTYR+SGAGGQH
Sbjct: 192 TENGVHRLVRISPFDSNARRHTSFASVAVYPVVDDDIDIEVLDKDLKIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ +RSQHKN+A+A   L+A+LYE ELQ RE  A+ G ++
Sbjct: 252 VNTTDSAVRITHMPTGIVVACQNQRSQHKNRAEAMKQLKARLYERELQIREAEASAGYAA 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVLQPYQ+VKDLRT I  T+P+DVLDG+LD F+ A LA +
Sbjct: 312 KSEIGWGHQIRSYVLQPYQLVKDLRTGITSTAPADVLDGNLDAFIAAALAQR 363


>gi|52082063|ref|YP_080854.1| peptide chain release factor 2 [Bacillus licheniformis ATCC 14580]
 gi|52787452|ref|YP_093281.1| hypothetical protein BLi03772 [Bacillus licheniformis ATCC 14580]
 gi|319647929|ref|ZP_08002147.1| peptide chain release factor 2 [Bacillus sp. BT1B_CT2]
 gi|52005274|gb|AAU25216.1| peptide chain release factor 2 [Bacillus licheniformis ATCC 14580]
 gi|52349954|gb|AAU42588.1| PrfB [Bacillus licheniformis ATCC 14580]
 gi|317390270|gb|EFV71079.1| peptide chain release factor 2 [Bacillus sp. BT1B_CT2]
          Length = 327

 Score =  273 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 165/325 (50%), Positives = 220/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ ++ E   L + ++  K + +   +  +  +L  E+ D  +  E  
Sbjct: 1   MADPDFWGDQQKAQTIINEANALKDYVNTYKSLSESHEELQMTHDLLKEDPDQDLQNELV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L+ +  +    + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+R 
Sbjct: 61  NELKSLTKQFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  ++ I+IEI   D ++DTYRASGAGGQHVNTTDSAVRITH+PTGV+V CQ ERSQ
Sbjct: 181 DVMPEFNEEIDIEIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTGVIVTCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A  ML++KLY+  +++++   +     + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNRERAMKMLKSKLYQRRIEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGD+D F+ A L  K
Sbjct: 301 TEMGNVQAVMDGDIDSFIDAYLRSK 325


>gi|302390246|ref|YP_003826067.1| bacterial peptide chain release factor 2 (bRF-2)
           [Thermosediminibacter oceani DSM 16646]
 gi|302200874|gb|ADL08444.1| bacterial peptide chain release factor 2 (bRF-2)
           [Thermosediminibacter oceani DSM 16646]
          Length = 365

 Score =  273 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 163/346 (47%), Positives = 229/346 (66%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  +    + D     ++ L  KT  P+ W +   A+ +++    L   +   + I+ + 
Sbjct: 16  IQEMRDALEIDRLKSEIAQLEEKTLTPNFWDDAQAAQKILQTLNQLKETVEKFEAIKKKW 75

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D + L+EL +E+ D  +  E S   +  K E E  + ++LL G  D N+A L +HAGAG
Sbjct: 76  EDLMTLIELGIEDHDEGLYGEISAEAEEFKKEFEEMRLKTLLRGRYDKNNAILSLHAGAG 135

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW  MLLRMYTRWAE + +K + L++  GEEAGIKSAT+L++GP AYG+LK EQG
Sbjct: 136 GTEAQDWVQMLLRMYTRWAEDKGYKVKVLDMLPGEEAGIKSATILVEGPYAYGYLKSEQG 195

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+D+  RRHTSF+S+ V P ++D IE+EI   D +I+T+R+ GAGGQ+VN T
Sbjct: 196 VHRLVRISPFDAAGRRHTSFASVDVIPEIEDDIEVEIKPEDLKIETFRSGGAGGQYVNKT 255

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITHIPTG+VV CQ ERSQ  N+  A  +LRAKL+ L L+++++  N     + EI
Sbjct: 256 ESAVRITHIPTGIVVTCQNERSQQSNRNTAMKLLRAKLFNLYLEEQQKKINELRGEQKEI 315

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            WG QIRSYV  PY +VKD RTN+E  +   V+DG++D F+ A L 
Sbjct: 316 AWGNQIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDMFINAYLK 361


>gi|253997054|ref|YP_003049118.1| hypothetical protein Mmol_1687 [Methylotenera mobilis JLW8]
 gi|253983733|gb|ACT48591.1| hypothetical protein Mmol_1687 [Methylotenera mobilis JLW8]
          Length = 367

 Score =  273 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 173/351 (49%), Positives = 240/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS + + L G  D+++  QRL  +N   EDP +W +  +++ L +E++ L+  ++ +  +
Sbjct: 16  LSERNHALRGYLDFESKSQRLEEVNGLLEDPKIWDDNAKSQALGKEKRTLELVVNTLIHV 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           Q  L D   L E+A EE+D   L     +   ++ E+   +F  + SGE DS + ++E  
Sbjct: 76  QGGLKDAQELFEMAREENDDDTLLSVEHDSLALEKEIAEMEFRRMFSGELDSANCFIEFQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +G+GGTE+QDWANMLLRMY R+ E++ FK E LE  +G+ AGIK A++ + G  AYG L+
Sbjct: 136 SGSGGTEAQDWANMLLRMYLRYCERKGFKVEVLEESEGDVAGIKGASIKVSGDYAYGTLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S+ ++P VDDSIEI+I+ +D R+DTYRASGAGGQH
Sbjct: 196 TENGVHRLVRKSPFDSNAKRHTSFASVQIFPEVDDSIEIDINPADLRVDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITHIPT  VVQCQ +RSQH+N+ +A NML+  LY LEL KR +     E +
Sbjct: 256 INKTDSAVRITHIPTNTVVQCQNDRSQHRNREEAMNMLKGALYNLELNKRNQEKQALEDA 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KT+IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F+  +L  
Sbjct: 316 KTDIGWGHQIRSYVLD-QSRIKDLRTGVEIGNTQGVLDGDLDPFITESLKQ 365


>gi|289450201|ref|YP_003475113.1| peptide chain release factor 2 [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289184748|gb|ADC91173.1| peptide chain release factor 2 [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 369

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 162/353 (45%), Positives = 227/353 (64%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++  L  LG     +  + R+S L  +T++P  W +  +A+ +  +   L   +   + +
Sbjct: 14  MTEPLKDLGKALYIEPTLDRISELEARTQEPDFWNDQTKAQEVQTKLAGLQRKVDTYRHL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           Q    D   L++L  EE+D +++ E        K      + ++LL GE D N+  L +H
Sbjct: 74  QKEFDDIDTLIDLGQEENDGAVVAEVQTQFNAFKELFNKLRLQTLLVGEYDRNNVILNIH 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDW  ML RMYTRWAE   ++ + L+I DG+EAG+KS +  I G NAYG+++
Sbjct: 134 AGAGGTEAQDWTEMLYRMYTRWAEDHDYQLKVLDILDGDEAGLKSVSFEIIGENAYGYMR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D++ RRHTSF+S+ V P +D+SI+I I+  D RID YR+SGAGGQH
Sbjct: 194 SEMGVHRLVRISPFDASGRRHTSFASVEVLPELDNSIQININPDDLRIDRYRSSGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+RITHIPTGVVV CQ ERSQ +N+  A NML++KL+ L    + +  +  + +
Sbjct: 254 VNKTESAIRITHIPTGVVVSCQTERSQIQNRETAMNMLKSKLFALAKAAQMDKVDDLKGN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           + +I WG QIRSYV  PY MVKD RTN E T    V+DGDLD F+ A L+  K
Sbjct: 314 QMDIAWGSQIRSYVFCPYTMVKDHRTNYEVTGVDKVMDGDLDGFINAYLSQGK 366


>gi|163789840|ref|ZP_02184276.1| peptide chain release factor 2, programmed frameshift
           [Carnobacterium sp. AT7]
 gi|159874780|gb|EDP68848.1| peptide chain release factor 2, programmed frameshift
           [Carnobacterium sp. AT7]
          Length = 353

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 178/345 (51%), Positives = 240/345 (69%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           LGGLFD +N  + ++  N +  +P  W++  +A+ ++ E   L    +   ++     D 
Sbjct: 3   LGGLFDLENLERDIAEYNDRMTEPTFWEDAQKAQTVINEANELKEKYNQYNDLVTEKEDL 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
            +LLE+  EE+D  + +E +  +     +++  + + LLS   D N+A +E+H GAGGTE
Sbjct: 63  ELLLEMVKEENDEELAKELNSKISPFLDKLDQYELDLLLSDPYDKNNAIIELHPGAGGTE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           SQDW ++LLRMYTRWAEKR FK E L    G+EAGIKS TLLIKG NAYG+LK E+GVHR
Sbjct: 123 SQDWGSLLLRMYTRWAEKRGFKIETLNYQSGDEAGIKSVTLLIKGMNAYGYLKAEKGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+DS  RRHTSF SI V P +DDS++I+I+  D +IDTYRA+GAGGQH+NTTDSA
Sbjct: 183 LVRISPFDSAGRRHTSFVSIDVVPELDDSVDIKINSDDLKIDTYRATGAGGQHINTTDSA 242

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIP+GVVV  Q +RSQ KN+ QA +ML+AKLY+LE++++E+        + EIGWG
Sbjct: 243 VRITHIPSGVVVASQAQRSQLKNRDQAMSMLKAKLYQLEVEEQEKEMAAIRGEQLEIGWG 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            QIRSYV  PY MVKD RTN E  + + V+DG +D F++A L  K
Sbjct: 303 SQIRSYVFHPYSMVKDHRTNYETGNIAQVMDGGIDPFIQAYLRSK 347


>gi|256006007|ref|ZP_05430946.1| peptide chain release factor 2 [Clostridium thermocellum DSM 2360]
 gi|281417086|ref|ZP_06248106.1| peptide chain release factor 2 [Clostridium thermocellum JW20]
 gi|255990030|gb|EEU00173.1| peptide chain release factor 2 [Clostridium thermocellum DSM 2360]
 gi|281408488|gb|EFB38746.1| peptide chain release factor 2 [Clostridium thermocellum JW20]
          Length = 357

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 167/342 (48%), Positives = 232/342 (67%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G LFD  +   ++  L  K  +P  W +   ++ ++++ + L + +    ++  +  D +
Sbjct: 4   GNLFDIASIGNQIEELEQKASEPDFWNDTENSQKILQKIKSLRSKVERYNKLVSQWEDLI 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L EL +EE D S++ E  +  +  K E E  + E+LL+G+ D N+A L +HAGAGGTE+
Sbjct: 64  TLCELGIEEQDESVIPEAVEGFKAFKKEFEALRLETLLTGQYDKNNAILTLHAGAGGTEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDW  ML RMYTRWAEK+ F  + L+  DGEEAGIKS T  + G NAYG+LK E+GVHRL
Sbjct: 124 QDWVQMLFRMYTRWAEKKGFTVKVLDYLDGEEAGIKSVTFQVIGENAYGFLKSEKGVHRL 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+D++ RRHTSF+S+ V P ++D IE+ I+  D RIDTYR+SGAGGQH+N T+SAV
Sbjct: 184 VRISPFDASGRRHTSFASLDVMPELNDDIEVHINPDDLRIDTYRSSGAGGQHINKTESAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIPTG+VV CQ ERSQ +NK  A  ML+AKL EL+ ++ +E     +  + EI WG 
Sbjct: 244 RITHIPTGIVVSCQSERSQFQNKDTAMKMLKAKLMELKERENKEKIEDLKGIQLEIAWGS 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYV  PY +VKD RTN E+ +   V+DG+LD F+ + L+
Sbjct: 304 QIRSYVFCPYTLVKDHRTNYEEINVDAVMDGELDGFINSYLS 345


>gi|125972886|ref|YP_001036796.1| peptide chain release factor 2 [Clostridium thermocellum ATCC
           27405]
 gi|125713111|gb|ABN51603.1| bacterial peptide chain release factor 2 (bRF-2) [Clostridium
           thermocellum ATCC 27405]
          Length = 357

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 167/342 (48%), Positives = 232/342 (67%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G LFD  +   ++  L  K  +P  W +   ++ ++++ + L + +    ++  +  D +
Sbjct: 4   GNLFDIASIGNQIEELEQKASEPDFWNDTENSQKILQKIKSLRSKVERYNKLVSQWEDLI 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L EL +EE D S++ E  +  +  K E E  + E+LL+G+ D N+A L +HAGAGGTE+
Sbjct: 64  TLCELGIEEQDESVIPEAVEGFKAFKKEFEALRLETLLTGQYDKNNALLTLHAGAGGTEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDW  ML RMYTRWAEK+ F  + L+  DGEEAGIKS T  + G NAYG+LK E+GVHRL
Sbjct: 124 QDWVQMLFRMYTRWAEKKGFTVKVLDYLDGEEAGIKSVTFQVIGENAYGFLKSEKGVHRL 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+D++ RRHTSF+S+ V P ++D IE+ I+  D RIDTYR+SGAGGQH+N T+SAV
Sbjct: 184 VRISPFDASGRRHTSFASLDVMPELNDDIEVHINPDDLRIDTYRSSGAGGQHINKTESAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIPTG+VV CQ ERSQ +NK  A  ML+AKL EL+ ++ +E     +  + EI WG 
Sbjct: 244 RITHIPTGIVVSCQSERSQFQNKDTAMKMLKAKLMELKERENKEKIEDLKGIQLEIAWGS 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYV  PY +VKD RTN E+ +   V+DG+LD F+ + L+
Sbjct: 304 QIRSYVFCPYTLVKDHRTNYEEINVDAVMDGELDGFINSYLS 345


>gi|238020780|ref|ZP_04601206.1| hypothetical protein GCWU000324_00670 [Kingella oralis ATCC 51147]
 gi|237867760|gb|EEP68766.1| hypothetical protein GCWU000324_00670 [Kingella oralis ATCC 51147]
          Length = 367

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 170/351 (48%), Positives = 242/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS++ + +    D+    +RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LSQRNSDIRVYMDYQGKKERLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ + DN  L+++ +EE+D         ++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  ENGIADNRELIDMVVEENDADGFAAIVADVAALEQQMADLEFKRMFNQPADPNNCFVDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA MLLRMYTR+AE++ FK E +E  DGE AGI +ATL I+G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLLRMYTRYAERKGFKVEVIEQDDGEIAGINNATLRIEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S++VYP VDDS EIEI+ +D R DTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFASVFVYPEVDDSFEIEINPADLRTDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITH+PTG+VVQ Q  RSQH+N+     MLRAKL+ELE++KR E     E  
Sbjct: 256 INKTDSAVRITHLPTGIVVQSQSSRSQHENRRIVMEMLRAKLFELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K+++GWG QIRSYVL     +KDLRT  E  +   VLDGDLD F++A+L  
Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|225027512|ref|ZP_03716704.1| hypothetical protein EUBHAL_01768 [Eubacterium hallii DSM 3353]
 gi|224955151|gb|EEG36360.1| hypothetical protein EUBHAL_01768 [Eubacterium hallii DSM 3353]
          Length = 371

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 165/352 (46%), Positives = 235/352 (66%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +    +  LG      +  +++  L ++  +   W +  +A+ + R+ ++L + +S    
Sbjct: 13  QYKEPMKELGVSLALSHKHEQIKELESEMREEGFWNDPDKAQEVTRKVKNLKDTVSAYHA 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D   ++EL  EE+D S++ +  + L   ++E +  + ++LLSGE D N+A + +
Sbjct: 73  LELTLDDVSTMIELGNEENDASVIPDIEELLGEFEIEFDNLKIQTLLSGEYDKNNAIVTL 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTES DWA ML RMY++WA+   FKTE L+  DG+EAGIKS T  + G NAYG+L
Sbjct: 133 HAGAGGTESCDWAGMLYRMYSKWADSHGFKTEVLDYLDGDEAGIKSITFEVNGENAYGYL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+++  +R TSF+S  V P +++ + +EI++ D RIDTYRASGAGGQ
Sbjct: 193 KSERGVHRLVRISPFNAAGKRQTSFASCDVMPDIEEDLSVEIADEDIRIDTYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N TDSA+RITHIPTGVVVQCQ ERSQHKNK +A  ML+AKLY ++ Q+  E  +    
Sbjct: 253 HINKTDSAIRITHIPTGVVVQCQNERSQHKNKDKAMQMLKAKLYLIKEQENREKLSDIRG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             ++ GWG QIRSYV+QPY MVKD RT  E  +   V+DG+LD FM A L  
Sbjct: 313 EVSDNGWGNQIRSYVMQPYTMVKDHRTGEETGNVQSVMDGNLDAFMNAYLRW 364


>gi|149374726|ref|ZP_01892500.1| peptide chain release factor 2 [Marinobacter algicola DG893]
 gi|149361429|gb|EDM49879.1| peptide chain release factor 2 [Marinobacter algicola DG893]
          Length = 351

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 181/349 (51%), Positives = 243/349 (69%), Gaps = 1/349 (0%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
             L   GG+FD+D   +RL+ +  + E P +W++   A+ L +ER  L+  +  I  +  
Sbjct: 2   SALKRSGGIFDYDQRSERLTEVERELEVPSVWEDPERAQALGKERSDLELIVRTIDNLTS 61

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
            L D   LLE+A EE+D     E   +L  +  E+E  +F  + SGE D+N+AYL++ AG
Sbjct: 62  GLEDAEGLLEIADEEEDEGTAAEIEADLAGLDKELEKLEFRRMFSGEMDANNAYLDIQAG 121

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           +GGTE+QDW NMLLRMY RWAE+R FK E +E+ +G+ AGIKSAT+ I+G  A+GWL+ E
Sbjct: 122 SGGTEAQDWGNMLLRMYLRWAERRGFKAEIVELQEGDVAGIKSATIHIQGDYAFGWLRTE 181

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHRLVR SP+DS +RRHTSFSS++V P VDDS EIEI+ +D R+D YRASGAGGQHVN
Sbjct: 182 TGVHRLVRKSPFDSGNRRHTSFSSVFVSPEVDDSFEIEINPADLRVDVYRASGAGGQHVN 241

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T+SAVR+TH PTG+VV CQ  RSQH+NK QA   L+AKL+E E+Q+R       E +K 
Sbjct: 242 RTESAVRLTHNPTGIVVACQAGRSQHQNKDQAMKQLKAKLFEREMQERNAEKQKAEDAKA 301

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +IGWG QIRSYVL     +KDLRT +E ++   VLDGD+D F++A+L +
Sbjct: 302 DIGWGSQIRSYVLDD-SRIKDLRTKVETSNTQSVLDGDIDKFIEASLKM 349


>gi|227872846|ref|ZP_03991157.1| peptide chain release factor RF2 [Oribacterium sinus F0268]
 gi|227841316|gb|EEJ51635.1| peptide chain release factor RF2 [Oribacterium sinus F0268]
          Length = 378

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 157/357 (43%), Positives = 219/357 (61%), Gaps = 3/357 (0%)

Query: 2   KLSRQ---LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58
           +LS +   L  L    D D   +R+  L+   E+P  W +  +A  L  E +HL + +  
Sbjct: 10  ELSSKEEPLQQLEAALDLDTKRKRIIELDRMMEEPDFWGDPEKANKLSTEARHLKDELEG 69

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
              ++    D   L+++  EE+D S++ E  + L      ++      LLSGE DS +  
Sbjct: 70  FTALKGNYEDIEALIQMGKEENDDSVIPEIRELLDSFSERLDQMNTTLLLSGEYDSMNVI 129

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           L ++AGAGGTE+ DWA +L RMYTRWAE+  F  + L+  DG+EAGIKS T+ + G  AY
Sbjct: 130 LRLNAGAGGTEANDWAGILYRMYTRWAERHGFTVKILDYLDGDEAGIKSVTMEVVGEYAY 189

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G+L+ E G+HRLVRISP+++  +R TSF S  V P ++  I+IEI E D +++ +RASGA
Sbjct: 190 GYLRSESGIHRLVRISPFNAQGKRQTSFVSCDVMPDIETDIDIEIREEDIKMEVFRASGA 249

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQH+N T SAVR+ HIPTG V  CQ+ERSQ +NK +A  ML+ KLY  E +++E     
Sbjct: 250 GGQHINKTSSAVRLIHIPTGFVAACQEERSQLQNKNKAMQMLKTKLYLKEKEEQEAKLAG 309

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                 + GWG QIRSYVLQPY+MVKDLRT  E  +   VLDGD+D F+ A L   +
Sbjct: 310 IRGEVKDNGWGSQIRSYVLQPYRMVKDLRTGEESGNTDAVLDGDIDRFISAYLKWMQ 366


>gi|293610588|ref|ZP_06692888.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826932|gb|EFF85297.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 337

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 175/335 (52%), Positives = 238/335 (71%), Gaps = 1/335 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             +RL  +  + EDP +W +   A+ + +E+  L+N I+ +  +  +L D   +L+LA+E
Sbjct: 2   KKERLEEVLRELEDPAIWNDQSRAQAMAKEKGELENVINVLDGLSTQLEDAKAMLDLAVE 61

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
            DD S+L++    L   + E+   +F  + S   D N  Y+E+ +G+GGTE+QDWA+MLL
Sbjct: 62  ADDESLLEDVQSELGAAEDELAKLEFRRMFSNPMDPNPCYVEIQSGSGGTEAQDWASMLL 121

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RW E+  FK E +E+ DG+ AGIKSAT+ ++G  AYGWL+ E GVHRLVR SP+DS
Sbjct: 122 RMYMRWIERHGFKAELMEVSDGDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDS 181

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
            +RRHTSFS++++ P VDD+IEI+I+ SD R DTYRASGAGGQH+N TDSAVR+THIPTG
Sbjct: 182 GNRRHTSFSAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTG 241

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV CQ +RSQH N+  AW  LRA+LYELE+QKR E A   E SK++IGWG QIRSYVL 
Sbjct: 242 IVVACQNQRSQHANRDHAWKQLRARLYELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLD 301

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
               +KDLRT +E ++   VLDGDLD F++A+L  
Sbjct: 302 D-SRIKDLRTGVENSNTGAVLDGDLDRFIEASLKQ 335


>gi|317051343|ref|YP_004112459.1| peptide chain release factor 2 [Desulfurispirillum indicum S5]
 gi|316946427|gb|ADU65903.1| Peptide chain release factor 2 [Desulfurispirillum indicum S5]
          Length = 367

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 193/352 (54%), Positives = 241/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  ++       D     +RL+ L    EDP LW +  +A+ ++RE + L +A++   EI
Sbjct: 12  MEEKVEFFRRCLDVPAKEERLAELVPMIEDPTLWNDPQQAQGILREDKMLKDALADFNEI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D  +L E   E++        +      +  V   +   LLS E D ++AYL ++
Sbjct: 72  HRLLEDVKVLHEFCQEDESNVDELTQNLAKL--EKLVADYELTVLLSDEHDPSNAYLTIN 129

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTESQDW +ML+RMYTRWAEKRKFK   +E  +GEEAGIKS TL I+G  AYG LK
Sbjct: 130 AGAGGTESQDWGSMLMRMYTRWAEKRKFKVTIMEYQEGEEAGIKSVTLFIEGLYAYGNLK 189

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DSN+RRHTSF+S++V P +DDSIE++I ESD RIDTYR+SGAGGQH
Sbjct: 190 SETGVHRLVRISPFDSNARRHTSFTSVFVSPEIDDSIEVDIRESDLRIDTYRSSGAGGQH 249

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH PTGVV QCQ ERSQH+NK QA  MLRAKLYELEL+K+ +     E S
Sbjct: 250 VNTTDSAVRITHTPTGVVTQCQSERSQHQNKEQAMKMLRAKLYELELEKKRQGLREVEDS 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K +I WG QIRSYVL PY+MVKDLRT  E  +   VLDG LD+F+KA L  +
Sbjct: 310 KMDIAWGSQIRSYVLHPYKMVKDLRTRHETGNAEAVLDGALDEFIKAYLQWQ 361


>gi|328952688|ref|YP_004370022.1| hypothetical protein Desac_0974 [Desulfobacca acetoxidans DSM
           11109]
 gi|328453012|gb|AEB08841.1| hypothetical protein Desac_0974 [Desulfobacca acetoxidans DSM
           11109]
          Length = 369

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 170/349 (48%), Positives = 243/349 (69%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS++ + L G  D +    RL+ +      P  WQN  ++  +++ER  L + ++  +E 
Sbjct: 15  LSQRYSQLRGRLDLEKKKARLAEIEVLAAKPDFWQNSSQSSQILKERGALTHLLTVWQEQ 74

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             ++ D  +LLELA EE D     +   +L+  +  ++  + E LL GE D  DA + +H
Sbjct: 75  GKKIEDLEVLLELAQEETDEQAFVDVLTDLKVQERALQQLELEMLLGGEDDDKDAIITIH 134

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA MLLRMY R+AE++ F+TE  ++  G+EAG+KS+T  + GP+AYG+LK
Sbjct: 135 AGAGGTEAQDWAEMLLRMYLRFAERQGFRTEIYDLLPGDEAGVKSSTFAVSGPHAYGYLK 194

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVRISP+D++ RRHTSF++++VYP  D+ I+I++ E D RIDT+RASGAGGQH
Sbjct: 195 SESGIHRLVRISPFDASGRRHTSFAAVFVYPEADEDIQIDLQEKDLRIDTFRASGAGGQH 254

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T SAVR+THIPTG+VV  Q ERSQH+N+  A  +L+++LYELE  KR+E A +   +
Sbjct: 255 VNKTSSAVRLTHIPTGIVVSMQNERSQHRNRELAMRVLKSRLYELEKSKRQEKAQVVLDA 314

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + +I WG QIRSYVLQPY+++KD RT  E+ +   VLDGDLD F++A L
Sbjct: 315 QKDIAWGSQIRSYVLQPYRLIKDHRTKHEEGNVEAVLDGDLDAFIEAYL 363


>gi|152979178|ref|YP_001344807.1| peptide chain release factor 2 [Actinobacillus succinogenes 130Z]
 gi|150840901|gb|ABR74872.1| peptide chain release factor 2 [Actinobacillus succinogenes 130Z]
          Length = 335

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 174/333 (52%), Positives = 234/333 (70%), Gaps = 1/333 (0%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +RL  +N + E P +W    +A+ L +ER  L+  +  IK++   L D   LLELA+E +
Sbjct: 2   ERLEEVNAELEQPDVWNEPEKAQALGKERSSLEAVVDTIKKLDQGLEDVDGLLELAVEGE 61

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D     E    L  ++ ++   +F  + SGE D+ D Y+++ AG+GGTE+QDW  MLLRM
Sbjct: 62  DQETFDEAVAELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQDWTEMLLRM 121

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y RWAE + FKTE +E+ DG+ AG+KSAT+ + G  A+GWL+ E G+HRLVR SP+DSN+
Sbjct: 122 YLRWAESKGFKTELMEVSDGDVAGLKSATVKVSGEYAFGWLRTETGIHRLVRKSPFDSNN 181

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           RRHTSF++ +VYP +DD I+I+I+ +D RID YRASGAGGQHVN T+SAVRITHIP+G+V
Sbjct: 182 RRHTSFAAAFVYPEIDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVRITHIPSGIV 241

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           VQCQ +RSQHKNK Q    L+AKLYE+ELQK+       E SK++IGWG QIRSYVL   
Sbjct: 242 VQCQNDRSQHKNKDQCMKQLKAKLYEMELQKKNADKQALEDSKSDIGWGSQIRSYVLDD- 300

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 301 SRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 333


>gi|76787098|ref|YP_329299.1| peptide chain release factor 2 [Streptococcus agalactiae A909]
 gi|123602195|sp|Q3K2F4|RF2_STRA1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|76562155|gb|ABA44739.1| peptide chain release factor 2, programmed frameshift
           [Streptococcus agalactiae A909]
          Length = 365

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 152/354 (42%), Positives = 220/354 (62%), Gaps = 2/354 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           ++   +L       D D   + ++ L  +  +P  W + I A+   +E   L        
Sbjct: 11  VENKEKLTSFRRSLDLDRLEEEIALLENQMTEPDFWNDNIAAQKTSQELNELKGKYDTFH 70

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            +Q+   +  +LLE+  E+D   + +E  +NL ++   +   +   LLS   D N+A LE
Sbjct: 71  NMQELSDETELLLEMLDEDDS--LKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILE 128

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +H G+GGTE+QDW ++LLRMYTR+     FK E L+   G+EAGIKS TL  +GPNAYG 
Sbjct: 129 IHPGSGGTEAQDWGDLLLRMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGL 188

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E GVHRLVRISP+DS  RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGG
Sbjct: 189 LKSEMGVHRLVRISPFDSAKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGG 248

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN   + VR+THIPTG+VV    +R+Q+ N+ +A  ML+AKLY+LE +K+ +  +  +
Sbjct: 249 QNVNKVSTGVRLTHIPTGIVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALK 308

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             K EI WG QIRSYV  PY MVKD RTN E      V+DG+++ F+ A L  +
Sbjct: 309 GDKKEITWGSQIRSYVFTPYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 362


>gi|332297634|ref|YP_004439556.1| Peptide chain release factor 2 [Treponema brennaborense DSM 12168]
 gi|332180737|gb|AEE16425.1| Peptide chain release factor 2 [Treponema brennaborense DSM 12168]
          Length = 378

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 170/352 (48%), Positives = 228/352 (64%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   +  + G  D  +    +S     + +   W+N  +A+ +M + + L N I   +++
Sbjct: 12  LKEDILNVWGRLDVPSIEAAISEKEALSGESGFWENPAKAEKVMTDIKQLKNRIEPWRDL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + D   L EL +E  D S+  E      + + E +     +LLSGE D N A+L +H
Sbjct: 72  IAAVDDAEALYELGMESGDESLEAELKAAYDQAQAEYDRLSILNLLSGEVDRNGAFLTIH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA ML RMY RWAE+R FK E +++ + E  GIKS TL I G  AYG+LK
Sbjct: 132 AGAGGTEACDWAQMLCRMYVRWAERRGFKVETVDMLEAE-GGIKSVTLQISGEYAYGYLK 190

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVRISP+DSN+RRHTSFSS++V+PV+DD+IE++I   D R+DTYRA GAGGQH
Sbjct: 191 SEAGIHRLVRISPFDSNARRHTSFSSVYVFPVLDDTIEVDIRPEDLRVDTYRAGGAGGQH 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVR TH+PTG+VV CQ ERSQ  N+A A +MLRA+LYE   +++E+      S 
Sbjct: 251 VNKTDSAVRFTHLPTGIVVACQTERSQTMNRATAMSMLRARLYEYYREQKEKENAKFASE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K +I WG QIRSYV QPY MVKD RT  E  +   V+DG +D F++A LA +
Sbjct: 311 KKDISWGNQIRSYVFQPYTMVKDHRTKHEIGNIQSVMDGAIDPFIEAFLAAQ 362


>gi|331701705|ref|YP_004398664.1| peptide chain release factor 2 [Lactobacillus buchneri NRRL
           B-30929]
 gi|329129048|gb|AEB73601.1| Peptide chain release factor 2 [Lactobacillus buchneri NRRL
           B-30929]
          Length = 373

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 158/353 (44%), Positives = 228/353 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + ++  G   D D   + ++   +K  +P  W +   A+ L+ +   L         
Sbjct: 14  EMQKAIDGFGRSLDLDALSESIAINESKMAEPGFWDDQEAAQKLIDQTNQLKTKRDNFVG 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++++L D  + LEL  E+    +  E   + +++K +++  Q   LL+G+ D N+A LE+
Sbjct: 74  LKNKLDDLKVTLELIEEDSHSGMEGEFETDEKQLKTKLDRYQLNLLLNGKYDHNNAILEI 133

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTE+QDW +MLLRMYTRWAE   F  + L+   G+ AG+ S +LLI G NAYG+L
Sbjct: 134 HPGAGGTEAQDWGSMLLRMYTRWAEAHGFTVQTLDYQVGDVAGLNSVSLLISGENAYGYL 193

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E+G+HRLVR+SP+DS  RRHTSF+S+ V P ++D + I+I+  D RID YR+SGAGGQ
Sbjct: 194 RSEKGIHRLVRLSPFDSAGRRHTSFASVDVMPELNDDVSIDINPDDLRIDVYRSSGAGGQ 253

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N T SAVRITH+PTG+V   Q +RSQ +N+  A NML++KLYELE +K+ E     E 
Sbjct: 254 HINKTSSAVRITHLPTGIVAASQAQRSQLQNRQTAMNMLKSKLYELEEEKKAEEKAKIEG 313

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + +IGWG QIRSYV  PY MVKD RTN E  + + V+DGDLD F+ A L  +
Sbjct: 314 EQKDIGWGSQIRSYVFHPYSMVKDHRTNYETANVNGVMDGDLDPFINAYLQWQ 366


>gi|116511800|ref|YP_809016.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
           SK11]
 gi|122940216|sp|Q02ZM8|RF2_LACLS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|116107454|gb|ABJ72594.1| bacterial peptide chain release factor 2 (bRF-2) [Lactococcus
           lactis subsp. cremoris SK11]
          Length = 365

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 148/350 (42%), Positives = 221/350 (63%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           S ++N      D D   + ++ L      P  W +   A+ ++ E   L       + + 
Sbjct: 14  SEKINGFRDSLDLDRLEEEIALLENDMAQPEFWNDQAAAQKVIDESNALKAKYDNYQAMN 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           + L +   +LE+  EE D  +  E  +    +  ++E  + E +L+   D  +A LE+H 
Sbjct: 74  NMLEEAQTMLEMLQEEADEDMQVELEEMTTALGQKIESYELEIMLNQPYDHMNAVLEIHP 133

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTESQDW +ML+RMYTRW E   FK E L+  DG+ AG+KS  +   G NAYG+L+G
Sbjct: 134 GSGGTESQDWGSMLMRMYTRWGEAHGFKVEILDYQDGDVAGLKSVAIRFVGRNAYGFLRG 193

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+DS +RRHTSF+S+ V P +DDSIE+E+ ++D ++DT+R+ GAGGQ+V
Sbjct: 194 EKGVHRLVRISPFDSANRRHTSFTSVDVMPELDDSIEVEVRDADVKMDTFRSGGAGGQNV 253

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N   + VR+TH+PTG+VVQ   +R+Q+ N+ +A  ML++KLY+LE+ K++   +     +
Sbjct: 254 NKVSTGVRLTHVPTGIVVQSTMDRTQYGNRDKAMAMLKSKLYQLEMDKKQAEVDELRGDQ 313

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +EI WG QIRSYV  PYQ+VKD RT  E    S+V+DG++D F+ A L  
Sbjct: 314 SEISWGSQIRSYVFMPYQLVKDTRTGYETGQISNVMDGEIDGFINAYLRW 363


>gi|209548908|ref|YP_002280825.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209534664|gb|ACI54599.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 376

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 241/353 (68%), Positives = 296/353 (83%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +  + +  L    DWD A++RL +LN K EDP+LW +  EA+ LMRERQ LD+ IS +K+
Sbjct: 11  ETKQAITLLRRHLDWDQAIRRLDWLNNKAEDPNLWNDSTEAQKLMRERQQLDDGISGVKQ 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ +L DN+ L+EL  EE D  +++E  D L+ +K E   +Q E++LSGEAD ND YLEV
Sbjct: 71  LEQQLNDNIELIELGEEEGDEGVVKEAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H+GAGGTESQDWANMLLRMYTRWAE+++FK E LE+HDGEEAGIKSATLL+KG NAYGWL
Sbjct: 131 HSGAGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDSN+RRHTSFSSIWVYPVVDDSI+IEI+E DCRIDTYR+SGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSIQIEINEGDCRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PTG+VVQCQQERSQHKN+A+AW+MLRA++YE EL+KRE+ A+   +
Sbjct: 251 HVNTTDSAVRITHMPTGIVVQCQQERSQHKNRAKAWDMLRARMYEAELKKREDAASAEAA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           SKT+IGWG QIRSYVLQPYQ+VKDLRT +  T+P DVLDG+L++FM+A LA +
Sbjct: 311 SKTDIGWGHQIRSYVLQPYQLVKDLRTGVASTAPDDVLDGELNEFMEAALAHR 363


>gi|311070034|ref|YP_003974957.1| peptide chain release factor 2 [Bacillus atrophaeus 1942]
 gi|310870551|gb|ADP34026.1| peptide chain release factor 2 [Bacillus atrophaeus 1942]
          Length = 327

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 165/325 (50%), Positives = 219/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ ++ E   L + ++  K++ +   +  +  +L  EE D  +  E  
Sbjct: 1   MADPEFWNDQQKAQTVINEANGLKDYVNSYKKLSESHEELQMTHDLLKEEPDEELQLELV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L+ +  E    + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+R 
Sbjct: 61  KELKTLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG++K E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYIKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  ++ I+I+I   D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ
Sbjct: 181 DVMPEFNEEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A  ML++KLY+  +++++   +     + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNRDRAMKMLKSKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGD+D F+ A L  K
Sbjct: 301 TEMGNVQAVMDGDIDVFIDAYLRSK 325


>gi|295401151|ref|ZP_06811124.1| peptide chain release factor 2 [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294976744|gb|EFG52349.1| peptide chain release factor 2 [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 327

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 173/325 (53%), Positives = 223/325 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +   A+ ++ E   L + +   + +++R  +  +  EL  EE D  + QE  
Sbjct: 1   MAAPDFWDDQKAAQTVINEANALKDLVGEFQSLEERFENLEVTYELIKEEPDEDLQQELV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              +R+  +    + + LL+   D N+A LE+H GAGGTESQDWA+MLLRMYTRWAEK+ 
Sbjct: 61  TEAKRLTKDFSEFELQLLLNEPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   GEEAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S 
Sbjct: 121 FKVETLDYLPGEEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD IEIEI   + RIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VV CQ ERSQ
Sbjct: 181 EVIPEMDDDIEIEIRPEEIRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A NML+AKLY+ +L++++         + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNREKALNMLKAKLYQKKLEEQQAELAEIRGEQKEIGWGNQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DG++D F+ A L  K
Sbjct: 301 VEVGNVQAVMDGEIDIFIDAYLRSK 325


>gi|225572941|ref|ZP_03781696.1| hypothetical protein RUMHYD_01132 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039699|gb|EEG49945.1| hypothetical protein RUMHYD_01132 [Blautia hydrogenotrophica DSM
           10507]
          Length = 348

 Score =  272 bits (694), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 164/336 (48%), Positives = 232/336 (69%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           N  +R+  L  + E P  W +  E++  M+E +++ + +   + ++ ++ D   L+E+  
Sbjct: 3   NKEKRIEELEREMEAPDFWDDAEESQKKMKELKYMKDDLQTYENLRTQMEDMETLIEMGY 62

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           EE+D  ++ E  + L   +   +  + ++LLSGE DSNDA + +HAGAGGTES DWA+ML
Sbjct: 63  EENDPDLIPEIQEMLDEFQKSFDDIRVKTLLSGEYDSNDAIVTLHAGAGGTESCDWASML 122

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMYTRWA+K+ F  E L+  DG+EAGIKS T  ++G NAYG+LK E+GVHRLVRISP++
Sbjct: 123 YRMYTRWADKKGFSLEVLDYLDGDEAGIKSVTFEVRGENAYGYLKSEKGVHRLVRISPFN 182

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +  +R TSF S  V P +++ +++EI + D R+DTYR+SGAGGQH+N T SA+RITH+PT
Sbjct: 183 AAGKRQTSFVSCDVMPDIEEDVDVEIRDDDIRVDTYRSSGAGGQHINKTSSAIRITHLPT 242

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ ERSQH NK +A  ML+AKLY L+ Q+ EE  +      TEIGWG QIRSYV+
Sbjct: 243 GIVVQCQNERSQHMNKDKAMQMLKAKLYLLKQQENEEKLSGIRGEVTEIGWGNQIRSYVM 302

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QPY MVKD RT+ E  +   V+DG++D F+ A L  
Sbjct: 303 QPYTMVKDHRTSEETGNVDSVMDGNIDLFINAYLKW 338


>gi|256390605|ref|YP_003112169.1| peptide chain release factor 2 [Catenulispora acidiphila DSM 44928]
 gi|256356831|gb|ACU70328.1| peptide chain release factor 2 [Catenulispora acidiphila DSM 44928]
          Length = 368

 Score =  272 bits (694), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 151/353 (42%), Positives = 216/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   +  +  + D      +++ L  +   P LW +  +A+ +  +   L   ++    +
Sbjct: 12  LRTTMASIEAVLDLGKLRAQIADLEEQASAPDLWDDQAKAQAVTSKLSGLQAELNRFSTL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             RL D  +L EL   E D   L E    L  +   V   +  +LLSGE D+ +A + + 
Sbjct: 72  NRRLEDIEVLFELGQSEGDEDALAEVQGELVDVSKAVGELEVRTLLSGEYDAREALVTLR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A MLLRMYTRWAE+  ++ E  +    EEAGIKSATL +K P AYG L 
Sbjct: 132 AEAGGVDAADFAEMLLRMYTRWAERHNYQYEVYDTSYAEEAGIKSATLTVKAPYAYGTLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ S  ++I E + R+D YR+SG GGQ 
Sbjct: 192 VEQGTHRLVRISPFDNQGRRQTSFAGVEVVPVVEQSDHVDIPEDELRVDVYRSSGPGGQG 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+P+G+VV CQ ERSQ +N+A A  +L+AKL +   ++ +   +  +  
Sbjct: 252 VNTTDSAVRITHLPSGIVVSCQNERSQIQNRASAMAVLQAKLLQRRREEEQAKMDALKDD 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +   WG Q+RSYVL PYQ+VKDLRTN E  + + VLDGD+D+F++A +  +K
Sbjct: 312 -SSGSWGNQMRSYVLHPYQLVKDLRTNYETGNTTAVLDGDIDEFIEAGIRWRK 363


>gi|125624350|ref|YP_001032833.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|166223629|sp|A2RLF5|RF2_LACLM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|124493158|emb|CAL98122.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300071134|gb|ADJ60534.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 365

 Score =  272 bits (694), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 148/350 (42%), Positives = 220/350 (62%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           S ++N      D D   + ++ L      P  W +   A+ ++ E   L       + + 
Sbjct: 14  SEKINGFRDSLDLDRLEEEIALLENDMAQPEFWNDQAAAQKVIDESNALKAKYDNYQAMN 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L +   +LE+  EE D  +  E  +    +  ++E  + E +L+   D  +A LE+H 
Sbjct: 74  TMLEEAQTMLEMLQEEADEDMQVELEEMTTALGQKIESYELEIMLNQPYDHMNAVLEIHP 133

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTESQDW +ML+RMYTRW E   FK E L+  DG+ AG+KS  +   G NAYG+L+G
Sbjct: 134 GSGGTESQDWGSMLMRMYTRWGEAHGFKVEILDYQDGDVAGLKSVAIRFVGRNAYGFLRG 193

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+DS +RRHTSF+S+ V P +DDSIE+E+ ++D ++DT+R+ GAGGQ+V
Sbjct: 194 EKGVHRLVRISPFDSANRRHTSFTSVDVMPELDDSIEVEVRDADVKMDTFRSGGAGGQNV 253

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N   + VR+TH+PTG+VVQ   +R+Q+ N+ +A  ML++KLY+LE+ K++   +     +
Sbjct: 254 NKVSTGVRLTHVPTGIVVQSTMDRTQYGNRDKAMAMLKSKLYQLEMDKKQAEVDELRGDQ 313

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +EI WG QIRSYV  PYQ+VKD RT  E    S+V+DG++D F+ A L  
Sbjct: 314 SEISWGSQIRSYVFMPYQLVKDTRTGYETGQISNVMDGEIDGFINAYLRW 363


>gi|311031920|ref|ZP_07710010.1| peptide chain release factor 2 [Bacillus sp. m3-13]
          Length = 326

 Score =  272 bits (694), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 172/325 (52%), Positives = 219/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N   A++++ E   L   +    E+ +   +  +  EL  EE D  +  E  
Sbjct: 1   MSNPEFWNNQSSAQVVINEANALKEPVGQFHELSENYENLQLTYELVKEEPDAELQAELG 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +  +    + + LLSGE D N+A LE+H GAGGTESQDW ++LLRMYTRWAE++ 
Sbjct: 61  SEVKTVAEDFNKFELQLLLSGEHDKNNAILELHPGAGGTESQDWGSLLLRMYTRWAERKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  DD+IEI+I   D +IDTYRASGAGGQH+NTTDSAVRITH+PT VVV CQ ERSQ
Sbjct: 181 EVMPEFDDNIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNVVVTCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A  ML+AKLY+ +L +++   +     + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 IKNRERAMKMLQAKLYQKKLDEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  K
Sbjct: 301 TEVGNTQAVMDGDLDPFIDAYLRSK 325


>gi|225016122|ref|ZP_03705355.1| hypothetical protein CLOSTMETH_00066 [Clostridium methylpentosum
           DSM 5476]
 gi|224951119|gb|EEG32328.1| hypothetical protein CLOSTMETH_00066 [Clostridium methylpentosum
           DSM 5476]
          Length = 375

 Score =  272 bits (694), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 172/352 (48%), Positives = 236/352 (67%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  L    D D  VQ ++ L      P  W ++  ++ ++++   L N I+  ++I
Sbjct: 19  LKPKIQQLRAALDVDALVQEVAQLEETAAQPGFWDDLDNSQKVLQKTTRLKNTIAEFEKI 78

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D   L+E A EEDD S   E   NL+ I+ +V+ ++  +LLSGE D+N+A L  H
Sbjct: 79  ESLYEDTQTLVEFAFEEDDESCSDEVKANLKSIQDQVDAQRLATLLSGEYDANNAILTFH 138

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DW  ML RMY+ WAE+  F+T+ L+  +GEEAGIKS ++LI G NAYG+LK
Sbjct: 139 AGAGGTEAMDWVEMLFRMYSHWAERHGFQTKTLDFVEGEEAGIKSISILIVGTNAYGFLK 198

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR+SP+DS+ RRHTSF+S+ V P VDDSIE+EI   D R+DTYR+SGAGGQH
Sbjct: 199 SETGVHRLVRVSPFDSSGRRHTSFASLEVIPEVDDSIEVEIRPEDLRVDTYRSSGAGGQH 258

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+RITH+PTG+V  CQ ERSQ +N+A A  ML++KL E++ ++  +  +  +  
Sbjct: 259 VNKTESAIRITHLPTGIVTACQNERSQMQNRAVAMKMLKSKLIEIKEREHLDKISDIKGE 318

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + EI WG QIRSYV  PY +VKD RT  E  + S V+DGDLD F+ A L  K
Sbjct: 319 QKEIAWGSQIRSYVFMPYTLVKDHRTGFENGNISAVMDGDLDGFINAYLVAK 370


>gi|307294100|ref|ZP_07573944.1| peptide chain release factor 2 [Sphingobium chlorophenolicum L-1]
 gi|306880251|gb|EFN11468.1| peptide chain release factor 2 [Sphingobium chlorophenolicum L-1]
          Length = 375

 Score =  272 bits (694), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 209/353 (59%), Positives = 264/353 (74%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   L+ L    DWD A++RL  LN + EDP LW N   A+ +MRER  L+ AI   + 
Sbjct: 11  RIDAALDLLRRFLDWDRALRRLDELNARVEDPTLWDNQKLAQEVMRERTRLEAAIGATRA 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I     D   L+E+A  E D  ++ E   +L+ +    +  + ++LL+GEAD++D YLE+
Sbjct: 71  IDSEKTDTAELIEMADAEGDEDMVTEAIASLKALADRADEDKIKALLAGEADASDTYLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA ML RMY RWAE+R +K E ++   G++AGIKSAT L KG NAYG+ 
Sbjct: 131 HAGAGGTESQDWAEMLSRMYRRWAERRGYKVELVDYQAGDQAGIKSATFLFKGENAYGYA 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD+IEIE++ESD +IDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDNIEIEVNESDLKIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+P+G++V  Q +RSQHKN+A A NML+A+LYE EL++REE A+    
Sbjct: 251 HVNTTDSAVRITHVPSGIIVASQNDRSQHKNRATAMNMLKARLYEAELRRREEAASGEYQ 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +KTEIGWG QIRSYVLQPYQ+VKDLRT +  TSP DVLDG LD FM A L+ K
Sbjct: 311 AKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTSPDDVLDGALDPFMAAALSQK 363


>gi|103488652|ref|YP_618213.1| peptide chain release factor 2 [Sphingopyxis alaskensis RB2256]
 gi|98978729|gb|ABF54880.1| bacterial peptide chain release factor 2 (bRF-2) [Sphingopyxis
           alaskensis RB2256]
          Length = 375

 Score =  272 bits (694), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 222/353 (62%), Positives = 265/353 (75%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K++  L  L    DWD AV+RL  LN K EDP LW N   A+ +MRER+ LD AI+  + 
Sbjct: 11  KITAALALLRRFLDWDRAVRRLDELNAKVEDPTLWDNPKAAQDVMRERRRLDEAITATRA 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+    D   L+ELA  E D +++ E   +L  +    E  + ++LL+GEAD NDAY+EV
Sbjct: 71  IERECADTAELIELAEMEGDEAMVDEAVASLAALAARAEEDKVKALLAGEADGNDAYIEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA ML RMY RWAEKR  K E +E   GE+AGIKSAT+L+KG NAYG+ 
Sbjct: 131 HAGAGGTESQDWAEMLQRMYMRWAEKRGMKVELIEYQAGEQAGIKSATMLVKGENAYGYA 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD+IEIEI+E D +IDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDNIEIEINEGDLKIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG+VV  Q +RSQHKN+A A  ML+A+LYE ELQKRE  A+    
Sbjct: 251 HVNTTDSAVRITHIPTGIVVASQNDRSQHKNRATAMGMLKARLYEAELQKREAAASGEYQ 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +KTEIGWG QIRSYVLQPYQ+VKDLRT +  T+P DVLDG LD FM A L+ K
Sbjct: 311 AKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTAPGDVLDGALDPFMAAALSQK 363


>gi|104780459|ref|YP_606957.1| peptide chain release factor 2 [Pseudomonas entomophila L48]
 gi|95109446|emb|CAK14147.1| peptide chain release factor 2 [Pseudomonas entomophila L48]
          Length = 364

 Score =  272 bits (694), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 182/351 (51%), Positives = 243/351 (69%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +   + G  D+D+   RL  +N + ED  +W     A+ L RER  L   +  + ++
Sbjct: 13  LTERSQSIRGYLDYDHKHDRLVEVNRELEDAAVWNKPEYAQALGRERAMLAQVVETLDKL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LL++A+EE+D   + +    L+ ++ ++   +F  + SGE D N+AYL++ 
Sbjct: 73  SGGLADCQDLLDMAVEENDEGAVGDVVTELEGLEEKLAQLEFRRMFSGEMDMNNAYLDIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+ +GE AGIK AT+ IKG  A+GWL+
Sbjct: 133 AGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ SD RIDTYR+SGAGGQH
Sbjct: 193 TEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPSDLRIDTYRSSGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QKR   +   E S
Sbjct: 253 VNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDS 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++IGWG QIRSYVL     +KDLRT +E++    VLDGDLD +++A+L  
Sbjct: 313 KSDIGWGHQIRSYVLDD-SRIKDLRTGVERSDCQKVLDGDLDQYLEASLKQ 362


>gi|323706500|ref|ZP_08118060.1| peptide chain release factor 2 [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323534162|gb|EGB23953.1| peptide chain release factor 2 [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 327

 Score =  272 bits (694), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 155/325 (47%), Positives = 224/325 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W ++ + + L ++++ L   IS  + ++ +  D   L+EL LEE D S+ QE  
Sbjct: 1   MSEPDFWNDLEKFQELSKKQKDLKEIISEYEALEKQWEDLHTLIELGLEEGDESLSQEVH 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +  + +  ++   + ++LLSG  D N+A L +HAGAGGTE+QDW  MLLRMY RWA  + 
Sbjct: 61  EEYKALSKKINDMKIKTLLSGPYDKNNAILSIHAGAGGTEAQDWTEMLLRMYMRWASSKN 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  E ++   G++AG+KS T+++KGP AYG+LK E GVHRLVRISP+D+  RRHTSF+ +
Sbjct: 121 YDVETVDYLPGDDAGVKSVTIMVKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD I+++I   D +IDTYR+SGAGGQHVN T+SA+RITHIPTG++VQCQ ERSQ
Sbjct: 181 EVLPEIDDDIKVDIRPEDLKIDTYRSSGAGGQHVNKTESAIRITHIPTGIIVQCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A  ML+AKL ++ +++++E     +    E GWG QIRSYV QPY +VKD RTN
Sbjct: 241 MQNRETAMKMLKAKLMDMMIKEQKEKIEDLKGEHKEAGWGNQIRSYVFQPYTLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  + + V+DG++DDF+ A L  K
Sbjct: 301 FEVGNVNAVMDGEIDDFINAYLKQK 325


>gi|74316939|ref|YP_314679.1| peptide chain release factor 2 [Thiobacillus denitrificans ATCC
           25259]
 gi|74056434|gb|AAZ96874.1| peptide chain release factor 2 [Thiobacillus denitrificans ATCC
           25259]
          Length = 349

 Score =  272 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 173/343 (50%), Positives = 242/343 (70%), Gaps = 1/343 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG FD+     RL  +   +E P  W +   A+ L RER+ L++ +  +  +   L D  
Sbjct: 6   GGFFDYPVKKDRLEEVVRLSEAPDFWNDAARAQELGRERKSLEDVVLVLDRVTSGLKDAG 65

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L E+A EE+D   L     ++  ++ +V   +F  + S  AD ++ +L++ AGAGGTE+
Sbjct: 66  ELFEMAREENDDDTLAAVQADIDGLEKDVATLEFRRMFSNPADPSNCFLDIQAGAGGTEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA+MLLR Y ++AE++ FK E LE  +G+ AGIKSA++ I+G  AYG+L+ E GVHRL
Sbjct: 126 CDWASMLLRQYLKYAERKGFKAELLEESEGDVAGIKSASIKIEGDYAYGYLRTETGVHRL 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS+  RHTSF+S++VYP VDDSIE+EI+ +D R+DTYRASGAGGQH+N TDSAV
Sbjct: 186 VRKSPFDSSGGRHTSFASVFVYPEVDDSIEVEINPADLRVDTYRASGAGGQHINKTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIP+G+VVQCQ +RSQHKN+A+A +ML++KLYE EL+KR+   +  E+ K ++GWG 
Sbjct: 246 RITHIPSGIVVQCQNDRSQHKNRAEAMSMLKSKLYEAELRKRQAEQDKLEAGKADVGWGH 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 306 QIRSYVLD-NSRIKDLRTNVEVSATQKVLDGDLDVFIEASLKQ 347


>gi|171910508|ref|ZP_02925978.1| peptide chain release factor 2 [Verrucomicrobium spinosum DSM 4136]
          Length = 359

 Score =  272 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 155/349 (44%), Positives = 218/349 (62%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GG+FD       L  L  +   P  W N   A+  +    +L N I  ++E++ RL
Sbjct: 1   MAGSGGIFDVGKLKSDLETLEDELARPEFWDNQERARKTIDTVNNLKNRILPLEELERRL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D  +L E+A  E+D +   E       ++  +   +   LL+GE D   A++ +H GAG
Sbjct: 61  EDFFVLGEIAQHENDLASWTEVEKEYHAMEKALSDFELAMLLTGELDKKGAFVTIHCGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTES DWA+MLLRMY RW E+  +KTE ++   GEE G++SA   + G  A+G L  E+G
Sbjct: 121 GTESCDWADMLLRMYQRWCERSGYKTEMVDFAPGEEVGVRSAVFRVTGDYAFGKLNCERG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+DS  RRHTSF+S+ V P VD+ I IE++E+D + +TYR+ G GGQ+VN  
Sbjct: 181 VHRLVRISPFDSAKRRHTSFASVDVTPEVDEDIGIELNEADIKFETYRSGGKGGQNVNKV 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++AVR+ H PTG++V CQ +RSQ KN+  A NML+AKLY+LE  K++         K ++
Sbjct: 241 ETAVRLIHEPTGIIVNCQVQRSQGKNREMAMNMLKAKLYQLEQDKKKTEMERQYGEKGDV 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            WG QIRSYV QPYQMVKD RT  +  +  +V+DGDLD F++A L  +K
Sbjct: 301 AWGSQIRSYVFQPYQMVKDHRTGEKTGNVGNVMDGDLDAFIEAKLRGRK 349


>gi|157803496|ref|YP_001492045.1| peptide chain release factor 2 [Rickettsia canadensis str. McKiel]
 gi|157784759|gb|ABV73260.1| peptide chain release factor 2 [Rickettsia canadensis str. McKiel]
          Length = 350

 Score =  271 bits (693), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 187/344 (54%), Positives = 248/344 (72%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           + GLFD   A +RL  L   T +P LW + + A+ L+RE+  L+  ++ + +++  L D 
Sbjct: 1   MRGLFDIKTATKRLKELAELTTNPDLWNDQVNAQTLLREKSTLEEKLNTLNKLKSNLKDT 60

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           L L  LA  E+D   L +   +L+ + +     + E L SGEAD N+ +LE++AGAGGTE
Sbjct: 61  LELEALAETENDLETLAQVKQDLKNLSIIAAKFETEYLFSGEADCNNCFLEINAGAGGTE 120

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           S DWA++++RMY R+AE+  FKTE + + +GEEAGIKS T+ I G  AYGW K E GVHR
Sbjct: 121 SHDWASIMMRMYLRFAERLDFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTEAGVHR 180

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+++  +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQHVNTTDSA
Sbjct: 181 LVRISPFNAAGKRMTSFASSWVYPEIDDNISITIDDKDLRIDTFRASGAGGQHVNTTDSA 240

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG V QCQ +RSQHKNKAQA  ML+AKLYELE+QKR +  N   ++KT+  WG
Sbjct: 241 VRITHIPTGTVTQCQSDRSQHKNKAQAMRMLKAKLYELEMQKRTDNINEQNAAKTDNSWG 300

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSY+LQPYQMVKDLRT+ E +    VLDG+L++F+ A+LA+
Sbjct: 301 HQIRSYILQPYQMVKDLRTDYETSDTRGVLDGNLEEFVSASLAM 344


>gi|308271179|emb|CBX27788.1| Peptide chain release factor 2 [uncultured Desulfobacterium sp.]
          Length = 344

 Score =  271 bits (693), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 167/343 (48%), Positives = 239/343 (69%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +FD DN  +RL+ +       + W+N  +A  L++ER  +   +   K +   L +  IL
Sbjct: 1   MFDLDNKEKRLNEIEFLISKDNFWENHDKATPLLKERTFISGKVESFKSLLKDLEECEIL 60

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             LA+EE D   ++E S  +Q++K ++       +L GE D N+A + ++AGAGGTE+QD
Sbjct: 61  YSLAIEESDSKTIEEVSVQIQKLKEKINKLSLLLMLDGEDDINNAIVSINAGAGGTEAQD 120

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           W+ +L RMY+RW EK+ FK+  ++   G+EAGIKS T+ ++G  AYG+LK E GVHRLVR
Sbjct: 121 WSEILFRMYSRWIEKKGFKSTIIDFQPGDEAGIKSVTITVEGDYAYGYLKTEIGVHRLVR 180

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+++N +RHTSF+S++VYP +D+SIEI+I E D RID +R+SGAGGQHVN T SA+RI
Sbjct: 181 ISPFNANGKRHTSFASVFVYPELDNSIEIDIDEKDLRIDIFRSSGAGGQHVNKTSSAIRI 240

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH+PTG+VVQCQQERSQHKNK  A ++L+++LY+LE QK+++        K EI WG QI
Sbjct: 241 THLPTGIVVQCQQERSQHKNKDMAMSVLKSRLYQLEKQKQDDKMQEIHDGKDEIAWGNQI 300

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           RSYVL PYQ++KD R N+E  + + VLDG +D F++  L  +K
Sbjct: 301 RSYVLHPYQLIKDHRINLETGNAAAVLDGAIDPFIEGVLLSRK 343


>gi|332978282|gb|EGK15010.1| peptide chain release factor RF2 [Psychrobacter sp. 1501(2011)]
          Length = 325

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 170/324 (52%), Positives = 225/324 (69%), Gaps = 1/324 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P LW +   A  + +E+  LD  I+ I  ++  L D   +LELA+E DD  +L +  
Sbjct: 1   MESPELWNDPERATKISKEKSQLDAIINTITGLETTLEDAAAMLELAVEADDEGLLSDVQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L   + +VE  +F+ + +GE D N+ ++++ +G+GGTE+QDWA MLLRMYTRW E   
Sbjct: 61  QELNAAQAQVEDLEFKRMFNGEMDPNNCFVDIQSGSGGTEAQDWAEMLLRMYTRWCESHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK +  E+  G  AG+KSA+  + G  A+GWL+ E GVHRLVR SP+DSN+ RHTSF+++
Sbjct: 121 FKVDVTEVSAGSVAGVKSASFKVTGDYAFGWLRTETGVHRLVRKSPFDSNNGRHTSFAAV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           +V P +DD I+I+I+ +D RIDTYR+SGAGGQHVNTTDSAVRITH PT  VVQCQ ERSQ
Sbjct: 181 FVSPEIDDDIDIDINPADLRIDTYRSSGAGGQHVNTTDSAVRITHEPTNTVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NKA A  MLRAKLYELE+QKR E     E +K+++GWG QIRSYVL     +KDLRT 
Sbjct: 241 HGNKATAMKMLRAKLYELEMQKRMEKQQAVEDNKSDVGWGSQIRSYVLDD-SRIKDLRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
           +E  +   VLDGDLD F++A+L  
Sbjct: 300 VETFNTGAVLDGDLDQFIEASLKA 323


>gi|147732321|sp|Q68X96|RF2_RICTY RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 369

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 175/351 (49%), Positives = 243/351 (69%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  +    D ++   RL+ L   T DP LW N   A++L+RE+ +++  ++    +
Sbjct: 12  IEQSLELIWRSLDIESLTIRLTELEELTADPSLWNNNANAQILLREKTNIEEKLNVFNNL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D L L  +A  E+D   L +   + +++ +     + E L S E+D N+ +LE++
Sbjct: 72  KSNFEDILELEAMAEVENDFETLNQIEQDFKKLSIIAAKLETECLFSDESDYNNCFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA++++RMY R+AE+  FKT+ + + +GEE GIKS T+ I G  AYGW K
Sbjct: 132 AGAGGTESHDWASIMMRMYLRFAERLGFKTQIINMINGEEVGIKSCTIRIIGKRAYGWFK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+++  +R TSF+S WVYP +DD I I I + D RIDT+RASGAGGQH
Sbjct: 192 TEAGVHRLVRISPFNAAGKRMTSFASSWVYPEIDDDIAITIEDKDLRIDTFRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPT  V QCQ +RSQHKNKAQA  ML+AKLY+LE+QKR +  +   ++
Sbjct: 252 VNTTDSAVRITHIPTNTVTQCQSDRSQHKNKAQAMKMLQAKLYKLEMQKRTDSVDKQNAN 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KT+  WG QIRSYVLQPYQ+VKDLRT+ E +    VLDG+L++F+ A+LA+
Sbjct: 312 KTDNSWGHQIRSYVLQPYQIVKDLRTDYETSDTKGVLDGNLENFVSASLAM 362


>gi|254294252|ref|YP_003060275.1| hypothetical protein Hbal_1892 [Hirschia baltica ATCC 49814]
 gi|254042783|gb|ACT59578.1| hypothetical protein Hbal_1892 [Hirschia baltica ATCC 49814]
          Length = 370

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 195/352 (55%), Positives = 255/352 (72%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + +  L    DWD + +RL  LN  +EDP  W +   A+ LMRER  +  A+  I  
Sbjct: 11  KIQQSIELLRRRLDWDVSSKRLEELNALSEDPDFWNDAENAQKLMRERTKIVTAMDDITA 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  + D   + E+A  E D S+L++  ++++   +  E  +  +LLSGE D ND ++E+
Sbjct: 71  LETEISDAEEMAEMAEMEGDDSLLEDIVESMKAALIRAERAELSALLSGEVDGNDCFVEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTESQDWANML RMY RWA     K E L+ HDGEEAGIKSATL + G NAYGWL
Sbjct: 131 NAGAGGTESQDWANMLRRMYVRWANAHGMKVEELDSHDGEEAGIKSATLKVSGENAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DSN++RHTSFSS+ V PV+DD+IE+EI + D R DTYRASG+GGQ
Sbjct: 191 KSESGVHRLVRISPFDSNAKRHTSFSSVAVSPVLDDTIEVEIEDKDVRTDTYRASGSGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N TDSA+R+TH PTG+VV CQ +RSQHKN+A AWNMLRA++YEL++++R E A     
Sbjct: 251 HINKTDSAIRLTHAPTGIVVACQSDRSQHKNRASAWNMLRARIYELKMRERAEAAQANAD 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +KT+IGWG QIRSYVLQPYQM+KDLRT +E +    VLDGDLD F+ A+L+ 
Sbjct: 311 AKTDIGWGHQIRSYVLQPYQMIKDLRTGVETSDTKGVLDGDLDKFLAASLSA 362


>gi|110801299|ref|YP_696849.1| peptide chain release factor 2 [Clostridium perfringens ATCC 13124]
          Length = 362

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 157/350 (44%), Positives = 229/350 (65%), Gaps = 1/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +G   D  +  ++ + L  K ++   W +V +A+ + +E + + + I   K 
Sbjct: 12  ELKNNLKEMGASLDLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKN 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +R+ D  +L EL  E D+ +  +     ++ +  E++  + E++LSGE D NDA L +
Sbjct: 72  LNERIDDVEVLKELMEENDEETAKE-IISEVKALSKEIDTLKIETILSGEYDRNDAILTL 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H G GG+++ DW  MLLRMYTRW EK+ +  E ++   G+EAG+KS TL +KG  AYG+L
Sbjct: 131 HTGVGGSDANDWTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+G+HRLVRISP+++N +R TSF+S+ V P +    +IEI+  D RIDTYRA GAGGQ
Sbjct: 191 KAEKGIHRLVRISPFNANGKRQTSFASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+VVQCQ ERSQ  N+  A  ML++KL EL+ +  +E       
Sbjct: 251 HVNKTESAVRITHIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              ++GWG QIRSYV  PY MVKD RTN+E ++ + V+DGD+D+F+ A L
Sbjct: 311 ELKDMGWGSQIRSYVFHPYSMVKDHRTNVETSNVNGVMDGDIDNFIIAYL 360


>gi|87200328|ref|YP_497585.1| peptide chain release factor 2 [Novosphingobium aromaticivorans DSM
           12444]
 gi|87136009|gb|ABD26751.1| bacterial peptide chain release factor 2 (bRF-2) [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 375

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 204/353 (57%), Positives = 262/353 (74%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   L  +    DWD AV+RL  LN + EDP LW +  +A+ +MRER+ L+ +I  + +
Sbjct: 11  RIEAALALVRKFLDWDRAVRRLDELNARVEDPKLWDDPKKAEEVMRERRRLEASIGTVNQ 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I   + D +  +EL   E D   + E    L  +    +  + ++LL+GEAD+N+A+LEV
Sbjct: 71  IGQEMADAIEFVELGEMEGDEDTINEGLATLAALAERADNDKVQALLAGEADANNAFLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA ML RMYTRWAE+  +K E ++ H GE AGIKSATLLIKG NAYG+ 
Sbjct: 131 HAGAGGTESQDWAEMLQRMYTRWAERHGYKVELVDYHAGEAAGIKSATLLIKGENAYGYA 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS++RRHTSFSS+WVYP +DD+IE+EI+ +D +IDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPEIDDNIEVEINPADLKIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PTG++V  Q +RSQHKN+A A  ML+A++YE EL KRE  A+   +
Sbjct: 251 HVNTTDSAVRITHVPTGIIVASQNDRSQHKNRATAMGMLKARIYEAELAKREAAASGEYA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +KTEIGWG QIRSYVLQPYQ VKDLRT +  T+P++VLDG LD FM A L+ +
Sbjct: 311 AKTEIGWGHQIRSYVLQPYQQVKDLRTGVVSTNPTEVLDGALDPFMAAALSQR 363


>gi|126739118|ref|ZP_01754812.1| peptide chain release factor 2 [Roseobacter sp. SK209-2-6]
 gi|126719735|gb|EBA16443.1| peptide chain release factor 2 [Roseobacter sp. SK209-2-6]
          Length = 374

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 196/352 (55%), Positives = 252/352 (71%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L  L    +W+ A  RL   N + EDP+LW +   A+ LMRERQ L +A+   K 
Sbjct: 11  EIEKSLELLAQRLNWETAEYRLEEFNARVEDPNLWDDPEAAQKLMRERQTLVDAMDTYKG 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L DN+ L+EL   E+D  ++ +  + L+ ++ +   K+ E+LL GEADSND +LE+
Sbjct: 71  IKQDLADNIELIELGEMEEDEEVVADAEEALKALQQKAAEKELEALLDGEADSNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTES DWA+ML RMY RWAEK+ +K E      GEEAGIKSA   I G NAYGWL
Sbjct: 131 NSGAGGTESCDWASMLARMYVRWAEKKGYKVELQSETAGEEAGIKSAAYKISGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ +D RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPADIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL KR  + N    
Sbjct: 251 HVNTTDSAVRITHNPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQIELDKRSALVNEVHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           S  + GWG QIRSYVLQPYQMVKDLRT+ E +    VLDGDLD FM ATLA+
Sbjct: 310 SAGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTKGVLDGDLDGFMAATLAL 361


>gi|325129251|gb|EGC52090.1| peptide chain release factor 2 [Neisseria meningitidis OX99.30304]
 gi|325133309|gb|EGC55975.1| peptide chain release factor 2 [Neisseria meningitidis M13399]
 gi|325205086|gb|ADZ00540.1| peptide chain release factor 2 [Neisseria meningitidis M01-240355]
          Length = 341

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 170/340 (50%), Positives = 237/340 (69%), Gaps = 1/340 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I   + DN +L+
Sbjct: 1   MDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 60

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ AGAGGTE++DW
Sbjct: 61  EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 120

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+ E GVHRLVR 
Sbjct: 121 AGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 180

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAVRIT
Sbjct: 181 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 240

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  K+++GWG QIR
Sbjct: 241 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIR 300

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           SYVL     +KDLRT  E  +   VLDGDLD F++A+L  
Sbjct: 301 SYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 339


>gi|254429259|ref|ZP_05042966.1| peptide chain release factor 2 [Alcanivorax sp. DG881]
 gi|196195428|gb|EDX90387.1| peptide chain release factor 2 [Alcanivorax sp. DG881]
          Length = 356

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 170/353 (48%), Positives = 232/353 (65%), Gaps = 8/353 (2%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
             LGG+FD+D   +RL+ +  + E+P +W +   A+ L +ER  L+  ++ I +    + 
Sbjct: 3   KRLGGIFDYDQKSERLTEVERELENPDVWNDPDYARALGKERAQLEMVVNTINDASQGVE 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   LL+L +EE D   L E   +L+ ++  V   +F  + SG+ D+  AYL++ AG+GG
Sbjct: 63  DTSALLDLVVEEGDEDTLTEVESDLRDLEKMVADLEFRRMFSGQMDACSAYLDIQAGSGG 122

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDW  M+LRMY RW E   FKTE +E   G+ AGIKSAT+  +G  AYGWL+ E GV
Sbjct: 123 TEAQDWGEMMLRMYLRWGEAHGFKTELVEASAGDVAGIKSATIRFEGEYAYGWLRTETGV 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS  RRHTSFSS++V P VDD I+++I     R+DTYRASGAGGQHVN TD
Sbjct: 183 HRLVRKSPFDSGGRRHTSFSSVFVSPEVDDDIDVDIDVGSMRVDTYRASGAGGQHVNRTD 242

Query: 248 SAVRITHIPTGV-------VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           SAVR+T+  T         V QCQ  RSQH+NK QA  M++AK+YE+E+Q+R     + E
Sbjct: 243 SAVRLTYEYTDEGGEKHTLVTQCQSGRSQHQNKDQALKMMQAKVYEVEMQRRNAEKQVQE 302

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           S+K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 303 SNKSDIGWGSQIRSYVLDD-GRIKDLRTGVESHNTQQVLDGALDQFIEASLKA 354


>gi|310822818|ref|YP_003955176.1| peptide chain release factor 2 [Stigmatella aurantiaca DW4/3-1]
 gi|309395890|gb|ADO73349.1| Peptide chain release factor 2 [Stigmatella aurantiaca DW4/3-1]
          Length = 380

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 157/341 (46%), Positives = 228/341 (66%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD D    R+S ++  +  P+ W +  +A+ L++E+  L+ ++    +    L D  
Sbjct: 27  GGIFDLDRKRSRISLIDRDSTLPNFWDDNTKAQALLKEKSTLEASVGAFDKALRGLDDAQ 86

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L+ELA E +D +  QE    L  ++ ++   +   +LSGE D ++ +++++AGAGGT+S
Sbjct: 87  TLMELAREANDEASAQEAEGLLPTLEGDIAKLELARMLSGENDRSNCFMDINAGAGGTDS 146

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA ML+RMYTR+ E+R ++ E  ++  GEEAG K+ +L I+G  AYG+LK E GVHRL
Sbjct: 147 MDWAAMLMRMYTRFCEERGWEVEISDMVAGEEAGFKNVSLHIRGEYAYGYLKAEVGVHRL 206

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+D+N+RR T+F+S+ VYP VDDSI I+I E D  +   R  GAGGQ VN T S  
Sbjct: 207 VRISPFDANARRQTAFASVDVYPEVDDSIRIDIPEKDYELKFIRGGGAGGQKVNKTSSTA 266

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           ++ H+PT +++ CQ ERSQ  NK  A+ +LRA+LYELEL+KRE   +  E+ K +I +G 
Sbjct: 267 QLRHLPTNILITCQTERSQSANKDMAFKILRARLYELELKKREAERDAAEAQKKDISFGS 326

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVL PY+MVKDLRT +E  +   VLDGDL+ F+ A L
Sbjct: 327 QIRSYVLAPYRMVKDLRTGVETGNVDAVLDGDLEQFVTAQL 367


>gi|119476451|ref|ZP_01616802.1| peptide chain release factor 2 [marine gamma proteobacterium
           HTCC2143]
 gi|119450315|gb|EAW31550.1| peptide chain release factor 2 [marine gamma proteobacterium
           HTCC2143]
          Length = 364

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 177/359 (49%), Positives = 250/359 (69%), Gaps = 8/359 (2%)

Query: 2   KLSRQLNC-------LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN 54
           +L+++L          GG+FD+D   ++L+ +  +  +P +W +   A+ L ++R  LD 
Sbjct: 5   RLNKRLKICLKGRKIFGGIFDYDIRKEQLTEVELELGEPAVWDDPGRAQELGKQRAALDI 64

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
            +S I ++   + D   LLE+A+EEDD   + E  + LQ +   +   +F  + SGE D+
Sbjct: 65  VVSTIDKLTVGVSDVAELLEMAVEEDDADTVMEIENELQLLNQHLATLEFRRMFSGEMDA 124

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
           N+A+LE+ +G+GGTE+QDWA M+ RMY RW E + F TE +E  DG+ AGIKSAT+   G
Sbjct: 125 NNAFLEIQSGSGGTEAQDWAEMICRMYLRWGESKGFSTELMEASDGDVAGIKSATIRFSG 184

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             A+GWL+ E GVHRLVR SP+DS SRRHTSF+S++V P +D+ I+IEI+ SD R DTYR
Sbjct: 185 EYAFGWLRTETGVHRLVRKSPFDSGSRRHTSFASVFVSPEIDEDIDIEINPSDLRTDTYR 244

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASGAGGQHVN TDSAVRITH P+G+VVQCQ +RSQH+N+  A   L+AKLYE+E+ KR E
Sbjct: 245 ASGAGGQHVNKTDSAVRITHEPSGIVVQCQSQRSQHQNRDFAMKQLKAKLYEMEMLKRNE 304

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            A   E +K +IGWG QIRSYVL     +KDLRT+++ ++ ++VLDGDLD F++A+L +
Sbjct: 305 AAQAQEDNKADIGWGSQIRSYVLDDQ-RIKDLRTHVQTSNCNNVLDGDLDLFIEASLKM 362


>gi|291459037|ref|ZP_06598427.1| peptide chain release factor 2 [Oribacterium sp. oral taxon 078
           str. F0262]
 gi|291418291|gb|EFE92010.1| peptide chain release factor 2 [Oribacterium sp. oral taxon 078
           str. F0262]
          Length = 378

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 161/357 (45%), Positives = 226/357 (63%), Gaps = 3/357 (0%)

Query: 2   KLSRQ---LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58
           +LS +   L  LG   D +N  +R+  L+   E+P  W +   A  L  E  HL N +  
Sbjct: 10  ELSTKAEPLEHLGASLDLENKRKRILELDRMMEEPDFWTDPERANRLSTENHHLKNELES 69

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
            + ++    D   L+E+ +EE D S++ E  + L     +++    + LLSGE D+ +A 
Sbjct: 70  YQSLKQSYDDIGALIEMGVEEGDESVIPEIRELLSEFSEKLDSMSTQLLLSGEYDAMNAI 129

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           L ++AGAGGTE+ DWA ML RMYTRWAE+R F  + L+  +GEEAGIKS T+ I G  AY
Sbjct: 130 LRLNAGAGGTEANDWAGMLYRMYTRWAERRGFGIKILDYLEGEEAGIKSVTMEIDGDYAY 189

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G+L+ E G+HRLVRISP+++  +R TSF S  V P ++  I+++I E D +++ +R+SGA
Sbjct: 190 GYLRSESGIHRLVRISPFNAQGKRQTSFVSCDVMPDIETDIDVDIREEDIKMEVFRSSGA 249

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQH+N T SAVR+ HIPTG VV CQ+ERSQ +N+ +A  ML+AKLY  E +++E     
Sbjct: 250 GGQHINKTSSAVRLIHIPTGFVVACQEERSQLQNRQKAMQMLKAKLYIKEKEEQEAKLAG 309

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                 + GWG QIRSYVLQPY+MVKDLRT  E  +   VLDGD+D F+ A L   +
Sbjct: 310 IRGEVKDNGWGSQIRSYVLQPYRMVKDLRTGEETGNTDAVLDGDIDRFITAYLKWVQ 366


>gi|114764683|ref|ZP_01443868.1| peptide chain release factor 2 [Pelagibaca bermudensis HTCC2601]
 gi|114542883|gb|EAU45904.1| peptide chain release factor 2 [Roseovarius sp. HTCC2601]
          Length = 373

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 192/353 (54%), Positives = 245/353 (69%), Gaps = 2/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + L+ LG   DW+ A  RL   N + EDP+LW +   A+ LMR+RQ L +A+     
Sbjct: 11  KIEKSLDLLGQRLDWETAPHRLEEFNARVEDPNLWDDPQAAQKLMRDRQFLVDAMETYTS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L DN+ L+EL   E+D  ++ E    L+ +  +   K+ E+LL GEAD ND +LE+
Sbjct: 71  IKQELSDNVELIELGEMEEDDEVVSEAEGALKALAEKAGQKELEALLDGEADGNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTE+ DWA ML RMY RWAEKR ++ E      G EAGIKS    I G NAYGWL
Sbjct: 131 NAGAGGTEACDWAAMLQRMYVRWAEKRGYEVELQSEEAGAEAGIKSVAYKISGTNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+   +R  TSF+S+WVYPVVDD+IEI+++ SD R+DTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFGKGTR-ETSFASVWVYPVVDDNIEIDVNPSDIRVDTYRSSGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PTG+VV    E+SQH+N+  A   L+++LY++EL +R    N    
Sbjct: 250 HVNTTDSAVRITHMPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRNAEINAQHE 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +K + GWG QIRSYVLQPYQMVKDLRT+ E +    VLDGDLD FM ATLA K
Sbjct: 309 AKGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTQGVLDGDLDPFMAATLAQK 361


>gi|325127235|gb|EGC50173.1| peptide chain release factor 2 [Neisseria meningitidis N1568]
 gi|325137398|gb|EGC59986.1| peptide chain release factor 2 [Neisseria meningitidis ES14902]
 gi|325141306|gb|EGC63796.1| peptide chain release factor 2 [Neisseria meningitidis 961-5945]
 gi|325199214|gb|ADY94670.1| peptide chain release factor 2 [Neisseria meningitidis G2136]
 gi|325203114|gb|ADY98568.1| peptide chain release factor 2 [Neisseria meningitidis M01-240149]
          Length = 341

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 170/340 (50%), Positives = 237/340 (69%), Gaps = 1/340 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I   + DN +L+
Sbjct: 1   MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 60

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ AGAGGTE++DW
Sbjct: 61  EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 120

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A ML RMY+R+AE++ FK E LE  DGE AGI  AT+ ++G  AYG L+ E GVHRLVR 
Sbjct: 121 AGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 180

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAVRIT
Sbjct: 181 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 240

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  K+++GWG QIR
Sbjct: 241 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIR 300

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           SYVL     +KDLRT  E  +   VLDGDLD F++A+L  
Sbjct: 301 SYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 339


>gi|160914511|ref|ZP_02076726.1| hypothetical protein EUBDOL_00517 [Eubacterium dolichum DSM 3991]
 gi|158433669|gb|EDP11958.1| hypothetical protein EUBDOL_00517 [Eubacterium dolichum DSM 3991]
          Length = 346

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 146/341 (42%), Positives = 209/341 (61%)

Query: 12  GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
             FD      ++  L  +T +   W +   A+ L+++   L + +   +++   L     
Sbjct: 2   SRFDLAEKKHKIEELTARTMEESFWSDPQHAQTLIQQLNGLKDVVESYEQLDHALAGMEE 61

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L L  ++ D  I +        ++   E  + + LLS E D ++A LE+H GAGGTES 
Sbjct: 62  TLTLLKDDFDTEIFELLEMEYHEMEERFEQFELKMLLSHEYDHSNAILELHPGAGGTESC 121

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+ML RMY+RWAEK+ +K   L+   G+EAGIKS T L++G  AYG+LK E+GVHRLV
Sbjct: 122 DWADMLYRMYSRWAEKKGYKVSVLDYLAGDEAGIKSITFLVEGDMAYGYLKAEKGVHRLV 181

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+DS  RRHTSF+S+ V P  +D IEIEI   D  ++T RASGAGGQH+N TDSA+R
Sbjct: 182 RISPFDSGGRRHTSFASLDVMPQFNDEIEIEIRPEDLIVETKRASGAGGQHINKTDSAIR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           + H PTG+V  CQ  RSQH+N+ +A  +L++++Y+  ++++E      +  +    WG Q
Sbjct: 242 MVHKPTGLVATCQNGRSQHENREEALRILKSRIYQKMIEEQEAKIAEIKGEQKANEWGSQ 301

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IRSYV  PY MVKD RT  E +    V+DG+LD F+ A L 
Sbjct: 302 IRSYVFHPYSMVKDHRTGYETSDTQSVMDGNLDAFIFAYLK 342


>gi|108759158|ref|YP_632896.1| peptide chain release factor 2 [Myxococcus xanthus DK 1622]
 gi|108463038|gb|ABF88223.1| peptide chain release factor 2 [Myxococcus xanthus DK 1622]
          Length = 373

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 156/349 (44%), Positives = 229/349 (65%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  L G  D D    R++ +   +  P  W +  +A+ L++E+  L+ ++    ++
Sbjct: 12  LRERVLALRGHLDLDRKRSRIALIERDSTLPTFWDDNTKAQALLKEKSTLEASVGAYDKV 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D  +L ELA+E +D +  QE   +L  ++ +V   +   +LSGE D +  +++++
Sbjct: 72  MRGLDDAQVLFELAVEANDEATTQEAEGSLTGLEGDVAKLELARMLSGEQDRSSCFMDIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGT+S DWA MLLRMYTR+ E + +K E  +   GEEAG K+ +L I+G  AYG+LK
Sbjct: 132 AGAGGTDSMDWAAMLLRMYTRYCENKGWKVEINDEVPGEEAGFKNVSLRIEGDFAYGYLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N+RR T+F+S+ VYP VDD+I+I+I E D  +   R  GAGGQ 
Sbjct: 192 AEVGVHRLVRISPFDANARRQTAFASVDVYPEVDDTIQIDIPEKDIDLKFIRGGGAGGQK 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T S  ++ H+PTG+++ CQ ERSQ  NK  A+ +LR +LYELE++KRE   +  E+ 
Sbjct: 252 VNKTSSTAQLRHLPTGIIITCQTERSQSANKDMAFKILRGRLYELEMKKREAARDAAEAQ 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K +I +G QIRSYVL PY+MVKDLRT IE  +   VLDGDL++F+ + L
Sbjct: 312 KKDISFGSQIRSYVLAPYRMVKDLRTGIETGNVDAVLDGDLEEFVTSQL 360


>gi|325201177|gb|ADY96632.1| peptide chain release factor 2 [Neisseria meningitidis H44/76]
          Length = 341

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 169/340 (49%), Positives = 237/340 (69%), Gaps = 1/340 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I   + DN +L+
Sbjct: 1   MDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLI 60

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E+ +EE+D        +++  ++ ++   +F+ + +  AD N+ ++++ AGAGGTE++DW
Sbjct: 61  EMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDW 120

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A ML RMY+R+AE++ F+ E LE  DGE AGI  AT+ ++G  AYG L+ E GVHRLVR 
Sbjct: 121 AGMLFRMYSRYAERKGFRIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 180

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DSN++RHTSF+S++VYP +DDSIEIEI+ +D RIDTYRASGAGGQH+N TDSAVRIT
Sbjct: 181 SPFDSNNKRHTSFASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRIT 240

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H PTG+VVQCQ +RSQH NKA A  ML++KLYELE++KR E     E  K+++GWG QIR
Sbjct: 241 HEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIR 300

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           SYVL     +KDLRT  E  +   VLDGDLD F++A+L  
Sbjct: 301 SYVLD-SSRIKDLRTGYEVGNTKAVLDGDLDGFIEASLKQ 339


>gi|262198721|ref|YP_003269930.1| hypothetical protein Hoch_5555 [Haliangium ochraceum DSM 14365]
 gi|262082068|gb|ACY18037.1| conserved hypothetical protein [Haliangium ochraceum DSM 14365]
          Length = 378

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 164/353 (46%), Positives = 231/353 (65%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  LGG+FD D    R+  L + + DP  W N  +A+  +RE + + + +    +
Sbjct: 22  ELENTLEELGGIFDVDEKRLRIEELESISADPAFWDNRQKAEDSLRELKSIKDVVGSYDK 81

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  +L D ++LLELA + +D     E     + I+  ++  +F  +LSGE D   A L++
Sbjct: 82  LSSKLADAVVLLELAEDAEDAESAIEARTAAEEIERSLDELEFRRMLSGEYDQGGAVLQI 141

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGG ++ DWA MLLRM  R+A+ + +K E L+    EEAGIKSATL+I G  AYG L
Sbjct: 142 NSGAGGVDAADWAQMLLRMILRYADHKGWKAEVLDEQAAEEAGIKSATLVITGEYAYGLL 201

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+ +RR TSF+++ V P +DDS+ ++I E + RID YRA GAGGQ
Sbjct: 202 KAEMGVHRLVRISPFDAQARRQTSFAAVTVSPDIDDSVHVDIDEGELRIDVYRAGGAGGQ 261

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITH+P+G+VVQCQ ERSQHKNKA A  +LR++LY+    +R+  A     
Sbjct: 262 HVNKTESAVRITHLPSGIVVQCQNERSQHKNKASAMRVLRSRLYDYLKAERDAAAAEAAP 321

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K +I WG QIRSYVL PY+ V D RT+++  +   VLDGDLD F++  L  +
Sbjct: 322 EKKKIEWGSQIRSYVLAPYRQVTDHRTDLKVGNVDAVLDGDLDPFIRTYLLSE 374


>gi|294677084|ref|YP_003577699.1| peptide chain release factor 2 [Rhodobacter capsulatus SB 1003]
 gi|294475904|gb|ADE85292.1| peptide chain release factor 2 [Rhodobacter capsulatus SB 1003]
          Length = 375

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 199/352 (56%), Positives = 239/352 (67%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  L    D + A  RL   N   E   LW +   A+ LMRERQ L + +   + I
Sbjct: 12  VRKTLRLLAQRMDLETAPHRLEEFNAMIEHGDLWSDPARAQKLMRERQMLMDKLETYRRI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN+ L+EL   EDD  I+ E   +L+ +K     K+ E+LL GEAD ND +LE++
Sbjct: 72  DRDLTDNIELIELGEMEDDPEIVAEAEKSLRALKELAAAKELEALLDGEADGNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMYTRWAEK+ +  E      G+EAGI+S    I G NAYGWLK
Sbjct: 132 AGAGGTESCDWASMLARMYTRWAEKKGYTVELQSETAGDEAGIRSVAYKISGQNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHR VRISPYDS +RRHTSFSS+WVYPVVDD+IEI+I  SD RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRQVRISPYDSAARRHTSFSSVWVYPVVDDNIEIDIPASDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT +VV     +SQH+N+  A N LRA+LY++EL KR    N    +
Sbjct: 252 VNTTDSAVRITHLPTNIVVTSSM-KSQHQNREAAMNALRARLYQMELDKRNAAINAQHEA 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K E GWG QIRSYVLQPYQMVKDLRT  E +    VLDGDLD FM ATLA+ 
Sbjct: 311 KGEAGWGNQIRSYVLQPYQMVKDLRTGHETSDTQGVLDGDLDAFMAATLAMD 362


>gi|225025532|ref|ZP_03714724.1| hypothetical protein EIKCOROL_02432 [Eikenella corrodens ATCC
           23834]
 gi|224941678|gb|EEG22887.1| hypothetical protein EIKCOROL_02432 [Eikenella corrodens ATCC
           23834]
          Length = 367

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 167/351 (47%), Positives = 238/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   +    D+D    RL  +   +EDP LW +   A+ + +ER+ L+  +  +  I
Sbjct: 16  LEKRSGEIRVYLDYDGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKVLEGIVLTLDNI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + DN +L+++ALEE D        +++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  AGGIDDNRLLIDMALEEGDEDSFAAIEEDVAELEKQMAELEFKRMFNQPADVNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA MLLRMY R+ E++ FK E +E  DGE AGI  AT+ ++G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLLRMYVRYGERKGFKVEIMEQDDGEIAGINRATIRLEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSF+S++VYP VDDS E+EI+ +D R DT+RASGAGGQH
Sbjct: 196 TETGVHRLVRHSPFDSNNKRHTSFASVFVYPEVDDSFEVEINPADVRTDTFRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVR+THIPTG+VVQ Q  RSQH N+     MLRAKL+ELE++KR E     E  
Sbjct: 256 INKTDSAVRMTHIPTGIVVQSQNSRSQHDNRRVCEEMLRAKLFELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K+++GWG QIRSYVL     +KDLRT+ E  +   VLDGDLDDF++A+L  
Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTSHETGNTKAVLDGDLDDFIEASLKQ 365


>gi|330719765|gb|EGG98281.1| Peptide chain release factor [gamma proteobacterium IMCC2047]
          Length = 365

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 179/352 (50%), Positives = 240/352 (68%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  + + L G  D+     RL  +  + ED  +W     A+ L +ER  L+N ++ I  
Sbjct: 13  ELQERTDVLRGYLDYAEKKDRLEEVERELEDSAVWDEPERAQALGKERSQLENIVATIDR 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   + D   LL +A+EEDD   + E S  ++ +  ++   +F  + SGE D N A+L++
Sbjct: 73  LDSGISDGHELLAMAIEEDDEDTVNEVSAEIETLDAQLAKLEFRRMFSGEMDENSAFLDI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA MLLRMY RW E++ FK E +E+  G+ AGIK AT+  +G  A+GWL
Sbjct: 133 QAGSGGTEAQDWAEMLLRMYLRWGEQKGFKVELMEVSAGDVAGIKGATIKFEGEYAFGWL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS SRRHTSFS+++V P +DD++EI+I+ +D RIDTYRASGAGGQ
Sbjct: 193 RTETGVHRLVRKSPFDSGSRRHTSFSAVFVSPEIDDNVEIDINPADLRIDTYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITH PT VVVQCQ +RSQH+NK  A   LRAKLYELE+QKR + A   E 
Sbjct: 253 HVNKTDSAVRITHEPTNVVVQCQSQRSQHQNKDFAMKQLRAKLYELEMQKRNDAAQAQED 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K +IGWG QIRSYVL     +KDLRTN+E ++   VLDG LD F++A+L  
Sbjct: 313 NKADIGWGSQIRSYVLD-SSRIKDLRTNVETSNTQAVLDGGLDMFIEASLKA 363


>gi|15888668|ref|NP_354349.1| peptide chain release factor 2 [Agrobacterium tumefaciens str. C58]
 gi|15156400|gb|AAK87134.1| peptide chain release factor 2 [Agrobacterium tumefaciens str. C58]
          Length = 342

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 231/328 (70%), Positives = 281/328 (85%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
           N K EDP LW +  EA+ LMRERQ LD++I+ +K ++ +L DN+ L+EL   E D  I++
Sbjct: 2   NNKAEDPTLWNDASEAQKLMRERQQLDDSINGVKALEQQLKDNIELIELGEMEGDDEIVK 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           +  D L+ ++ E   +Q E++LSGEADSND Y+EVH+GAGGTESQDWANMLLRMYTRWAE
Sbjct: 62  DAEDALKALRSEANRRQVEAMLSGEADSNDTYVEVHSGAGGTESQDWANMLLRMYTRWAE 121

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           ++ FK E LEIHDG+EAGIKSAT+L+KG NA+GW+K E GVHRLVRISPYDSN+RRHTSF
Sbjct: 122 RQGFKVEVLEIHDGDEAGIKSATILVKGHNAFGWMKTESGVHRLVRISPYDSNARRHTSF 181

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           SSIWVYPVVDDSI+I+I+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+ V CQQE
Sbjct: 182 SSIWVYPVVDDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIAVACQQE 241

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQHKN+A+AW+MLRA+LYE+ELQKREE AN   +SKT+IGWG QIRSYVLQPYQ+VKDL
Sbjct: 242 RSQHKNRAKAWDMLRARLYEVELQKREEAANAQAASKTDIGWGHQIRSYVLQPYQLVKDL 301

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           RT +E T+P +VLDGDL++FM+A LA +
Sbjct: 302 RTGVESTAPGNVLDGDLNEFMEAALAHR 329


>gi|269836751|ref|YP_003318979.1| hypothetical protein Sthe_0720 [Sphaerobacter thermophilus DSM
           20745]
 gi|269786014|gb|ACZ38157.1| conserved hypothetical protein [Sphaerobacter thermophilus DSM
           20745]
          Length = 369

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 157/347 (45%), Positives = 217/347 (62%), Gaps = 2/347 (0%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
            +L+ +G   D     + +  L  ++ DP  W +   A+ +MR    L N +    E+  
Sbjct: 15  ERLDRIGVRLDLPAKQREIEELEARSADPEFWNDGAGAQRVMRRLGALRNQVETWTELHQ 74

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
           +  D   L++LA  +DD                 VE  +   LLSG+ D +DA + +HAG
Sbjct: 75  QAADLRELIDLAEADDDLRDEIAAETERV--LRGVEQLELNLLLSGQYDEHDAIMAIHAG 132

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
            GG ++QDWA ML+RMY RWA  R F+ + L++ +GEEAGIKSAT+ I+GP AYG+ KGE
Sbjct: 133 TGGVDAQDWAEMLMRMYLRWASNRGFQAQVLDVTEGEEAGIKSATIEIRGPYAYGYTKGE 192

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HRLVR+SP+D   RRHT+F+ + V P V++  EI I + + RIDTYR+SGAGGQHVN
Sbjct: 193 AGTHRLVRLSPFDQAHRRHTAFALVEVLPQVEEDTEIVIRDDEIRIDTYRSSGAGGQHVN 252

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            TDSAVRITH+PTG+VV CQ ERSQ +N+  A  +LRA+L EL ++KREE     +    
Sbjct: 253 KTDSAVRITHLPTGIVVTCQNERSQIQNRETAMKILRARLTELAIRKREEEQAKLKGEHV 312

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +GWG +IRSYVLQPY MV D RT    ++   V +G++D F++A L
Sbjct: 313 AVGWGNRIRSYVLQPYTMVTDHRTEYSTSNVQAVFEGEIDPFIEAYL 359


>gi|219670742|ref|YP_002461177.1| hypothetical protein Dhaf_4746 [Desulfitobacterium hafniense DCB-2]
 gi|219541002|gb|ACL22741.1| hypothetical protein Dhaf_4746 [Desulfitobacterium hafniense DCB-2]
          Length = 368

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 162/350 (46%), Positives = 228/350 (65%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L  L    D      ++S L  + + P  W N   A+ +M+E  +    +     +
Sbjct: 12  LEVRLADLRVSLDVPQREDKISILEIELQRPDFWDNPEGAQKVMQELSYQQEKVKTYYTL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           Q +L D L L ++A+EE D S+  E  + +  ++  ++  + E LLSG  D N+A + +H
Sbjct: 72  QQQLDDMLTLYQMAVEEKDESLEPELEEGILALQQRLDGLELEILLSGPYDRNNAIVTLH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDW +ML RMY R+ E+  +K E ++   G+EAGIKSATL   G NA+G+LK
Sbjct: 132 AGAGGTEAQDWVSMLYRMYIRYGERHGYKVETMDFLPGDEAGIKSATLSFAGENAFGYLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241
            E+GVHRLVRISP+D++ RRHTSF+S+ V P  ++D+ EI+I   D ++DTYRASGAGGQ
Sbjct: 192 AEKGVHRLVRISPFDASGRRHTSFASVDVIPEVMEDNAEIQIPPEDLKVDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T SAVRITH+PTG+VVQ Q ERSQ +N+A    +L+AKL EL+ +++E+  +    
Sbjct: 252 HVNKTSSAVRITHLPTGIVVQSQSERSQIQNRAYCLRILQAKLLELKRKQQEDEISEIRG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + EI WG QIRSYV  PY MVKD RTN E  +   V+DG++D F+ A L
Sbjct: 312 EQQEIAWGSQIRSYVFHPYNMVKDHRTNEETANTGAVMDGEIDQFIAAYL 361


>gi|139474158|ref|YP_001128874.1| peptide chain release factor 2 [Streptococcus pyogenes str.
           Manfredo]
 gi|166225116|sp|A2RFN2|RF2_STRPG RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|134272405|emb|CAM30661.1| peptide chain release factor 2 [Streptococcus pyogenes str.
           Manfredo]
          Length = 365

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 151/354 (42%), Positives = 219/354 (61%), Gaps = 2/354 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           ++   +L       D D   + ++ L     +P  W + I A+   +E   L        
Sbjct: 11  VENKEKLTSFRRSLDLDRLEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFH 70

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            +Q+   +  +LLE+  E+D   + +E  +NL ++   +   +   LLS   D N+A LE
Sbjct: 71  NMQELSDETELLLEMLDEDDS--LKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILE 128

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +H G+GGTE+QDW ++LLRMYTR+     FK E L+   G+EAGIKS TL  +GPNAYG 
Sbjct: 129 IHPGSGGTEAQDWGDLLLRMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGL 188

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E GVHRLVRISP+DS  RRHTSF+S+ V P +D++IE+E+ + D ++DT+R+ GAGG
Sbjct: 189 LKSEMGVHRLVRISPFDSAKRRHTSFASVEVMPELDNTIEVEVRDDDIKMDTFRSGGAGG 248

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN   + VR+THIPTG+VV    +R+Q+ N+ +A  ML+AKLY+LE +K+ +  +  +
Sbjct: 249 QNVNKVSTGVRLTHIPTGIVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALK 308

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             K EI WG QIRSYV  PY MVKD RTN E      V+DG+++ F+ A L  +
Sbjct: 309 GDKKEITWGSQIRSYVFTPYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 362


>gi|328956713|ref|YP_004374099.1| peptide chain release factor 2 [Carnobacterium sp. 17-4]
 gi|328673037|gb|AEB29083.1| peptide chain release factor 2 [Carnobacterium sp. 17-4]
          Length = 351

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 178/345 (51%), Positives = 239/345 (69%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           +GGLFD +   + ++  N +  +P  W +  +A+ ++ E   L    +  K++     + 
Sbjct: 1   MGGLFDLETLERDIAEYNDRMTEPTFWDDAQKAQAIINEANELKEKYNQYKDLLTEKEEL 60

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
            +LLE+  EE+D  +++E    +     +++  + E LLS   D N+A +E+H GAGGTE
Sbjct: 61  DLLLEMVKEENDEELVKELDSKINPFLDKLDQYELELLLSDPYDKNNAIIELHPGAGGTE 120

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           SQDW N+LLRMYTRWAEKR FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHR
Sbjct: 121 SQDWGNLLLRMYTRWAEKRGFKIETLDYQSGDEAGIKSVTLLIKGMNAYGYLKAEKGVHR 180

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+DS  RRHTSF SI V P +DDS++I+I+  D ++DTYRASGAGGQH+NTTDSA
Sbjct: 181 LVRISPFDSAGRRHTSFVSIDVVPELDDSVDIKINSDDLKVDTYRASGAGGQHINTTDSA 240

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTGVVV  Q +RSQ KN+ QA +ML+AKL++LE+++ E+        + EIGWG
Sbjct: 241 VRITHMPTGVVVASQAQRSQLKNREQAMSMLKAKLHQLEVEEHEKEMAAIRGEQLEIGWG 300

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            QIRSYV  PY MVKD RTN E  + S V+DG +D F++A L  K
Sbjct: 301 SQIRSYVFHPYSMVKDHRTNYETGNISQVMDGGIDPFIQAYLRSK 345


>gi|294055147|ref|YP_003548805.1| hypothetical protein Caka_1616 [Coraliomargarita akajimensis DSM
           45221]
 gi|293614480|gb|ADE54635.1| hypothetical protein Caka_1616 [Coraliomargarita akajimensis DSM
           45221]
          Length = 386

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 158/356 (44%), Positives = 220/356 (61%), Gaps = 4/356 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +++R+   +    D    ++ +  L  +  +P  W +   A+ ++ E   L  A++  + 
Sbjct: 14  EITRRAGHIWRYLDGVKKLEEIEALEAQMAEPTFWDDQQAAQKVIAEANRLKAAVNPCRA 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDA 117
               + D   +LEL  E             +      +  +++  +  S L+G  DS +A
Sbjct: 74  FNAEVDDLQAMLELVDEMGGDPDAAAYEQEVLDAVHALLPKLDALELASFLTGPHDSCNA 133

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            L +HAGAGGTES DWA+MLLRMYTRW E+  F  +  +I  GEEAGI SAT+ I+GPNA
Sbjct: 134 LLTIHAGAGGTESCDWADMLLRMYTRWGERAGFTVDIQDIMPGEEAGISSATIRIEGPNA 193

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           YG+ K E+GVHRLVRISP+DSN+RRHTSFSS+ V   ++D I+++I ES+ R D YRASG
Sbjct: 194 YGYAKAERGVHRLVRISPFDSNARRHTSFSSVDVIAEIEDDIDLDIPESEIRTDVYRASG 253

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQHVN T+SAVR+THIPT +VV CQ ERSQ KNKA A   L+++LYE  L ++     
Sbjct: 254 KGGQHVNRTESAVRLTHIPTNLVVTCQNERSQIKNKATAMRTLKSRLYEKMLDEKRSEME 313

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
                K +I WG QIRSYV QPYQ+V DLRT +++ +   V+DG+LD F+ A L  
Sbjct: 314 KFYGEKGDIAWGNQIRSYVFQPYQLVTDLRTGLKEGNVQGVMDGELDPFVHAWLRA 369


>gi|288941013|ref|YP_003443253.1| peptide chain release factor 2 [Allochromatium vinosum DSM 180]
 gi|288896385|gb|ADC62221.1| peptide chain release factor 2 [Allochromatium vinosum DSM 180]
          Length = 349

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 184/342 (53%), Positives = 240/342 (70%), Gaps = 1/342 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+     RL+ +  + EDP +W +   A+ L RER  L+  +  I E+   L D  
Sbjct: 6   GGIFDYAERKDRLTEVLRELEDPTIWNDPGRAQALGRERATLEAVVLTIDELTGALADAD 65

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LL LA EE D + L+    +L+  +  V   +F  + SGE D+ +A++++ AG+GGTE+
Sbjct: 66  DLLALAAEESDEATLESLVADLKSHEARVSELEFRRMFSGEMDACNAFVDIQAGSGGTEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMY RW E+R FKTE +E+  GE AGIKSAT+  +G  A+GWL+ E GVHRL
Sbjct: 126 QDWAEMLLRMYLRWGERRGFKTELMEVSAGEVAGIKSATVKFEGDYAFGWLRTEIGVHRL 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS +RRHTSFSS++V P VDDS+EIEI+ +D RID YRASGAGGQHVN T+SAV
Sbjct: 186 VRKSPFDSGNRRHTSFSSVFVSPEVDDSVEIEINPADLRIDVYRASGAGGQHVNRTESAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PTG+VVQCQ +RSQHKNK QA   L++KLYELE+QKR       E +K++IGWG 
Sbjct: 246 RITHNPTGIVVQCQNDRSQHKNKDQAMKQLKSKLYELEMQKRRASQQALEETKSDIGWGS 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYVL     +KDLRT +E  +   VLDG+LD F++A+L 
Sbjct: 306 QIRSYVLD-QSRIKDLRTGVEIANTQGVLDGNLDPFIQASLK 346


>gi|326387471|ref|ZP_08209080.1| peptide chain release factor 2 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208127|gb|EGD58935.1| peptide chain release factor 2 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 375

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 205/353 (58%), Positives = 261/353 (73%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   L  +    DWD AV+RL  L+ + EDP LW +  +A+ +MRER+ LD AI  +K+
Sbjct: 11  RIEGALALIRKFLDWDRAVRRLHELDARVEDPKLWDDPKQAEAVMRERRRLDAAIGTVKQ 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I   + D +  +EL   E D   + E    L  +    +  + ++LL+GEAD+N+A+LEV
Sbjct: 71  IGQEMADAIEFVELGEMEGDEDTVAEGLATLAALAERADADKVQALLAGEADANNAFLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA ML RMYTRWAE+  +K E ++ H GE AGIK  TLLIKG NAYG+ 
Sbjct: 131 HAGAGGTESQDWAEMLQRMYTRWAERHGYKVELVDYHAGEAAGIKGCTLLIKGENAYGYA 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS++RRHTSFSS+WVYP +DD+I+IEI+ +D ++DTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPEIDDNIDIEINPADLKVDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PTG++V  Q +RSQHKN+A A  MLRA+LYE EL KRE  A+   +
Sbjct: 251 HVNTTDSAVRITHVPTGIIVASQNDRSQHKNRATAMGMLRARLYEAELAKREAAASGEYA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +KTEIGWG QIRSYVLQPYQ VKDLRT +  T+P++VLDG LD FM A L+ +
Sbjct: 311 AKTEIGWGHQIRSYVLQPYQQVKDLRTGVVSTNPTEVLDGALDPFMAAALSQR 363


>gi|15672953|ref|NP_267127.1| peptide chain release factor 2 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|281491474|ref|YP_003353454.1| peptide chain release factor 2 [Lactococcus lactis subsp. lactis
           KF147]
 gi|24638157|sp|Q9CGX1|RF2_LACLA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|12723911|gb|AAK05069.1|AE006331_9 peptide chain release factor 2 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|281375192|gb|ADA64705.1| Peptide chain release factor 2 (RF-2) [Lactococcus lactis subsp.
           lactis KF147]
 gi|326406515|gb|ADZ63586.1| peptide chain release factor RF-2 [Lactococcus lactis subsp. lactis
           CV56]
          Length = 365

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 148/350 (42%), Positives = 221/350 (63%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           + ++N      D +   + ++ L      P  W +   A+ ++ E   L       + + 
Sbjct: 14  AEKINGFRESLDLERLEEEIALLENDMAQPEFWNDQAAAQKVIDESNALKAKYDNYQAMN 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           + L +   +LE+  EE D  +  E  +    +  ++E  + E +L+   D  +A LE+H 
Sbjct: 74  NMLEEAQTMLEMLQEEADEEMQAELEEMTIALGQKIESYELEIMLNQPYDHMNAVLEIHP 133

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTESQDW +ML+RMYTRW E   FK E L+  DG+ AG+KS  L   G NAYG+L+G
Sbjct: 134 GSGGTESQDWGSMLMRMYTRWGEAHGFKVEILDYQDGDVAGLKSVALRFVGRNAYGFLRG 193

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+DS +RRHTSF+S+ V P +DDSIE+++ ++D ++DT+R+ GAGGQ+V
Sbjct: 194 EKGVHRLVRISPFDSANRRHTSFTSVDVMPELDDSIEVDVRDADVKMDTFRSGGAGGQNV 253

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N   + VR+THIPTG+VVQ   +R+Q+ N+ +A  ML++KLY+LE+ K++   +     +
Sbjct: 254 NKVSTGVRLTHIPTGIVVQSTMDRTQYGNRDKAMAMLKSKLYQLEMDKKQAEVDELRGDQ 313

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +EI WG QIRSYV  PYQ+VKD RT  E    S+V+DG+LD F+ A L  
Sbjct: 314 SEISWGSQIRSYVFMPYQLVKDTRTGYETGQISNVMDGELDGFINAYLRW 363


>gi|229827336|ref|ZP_04453405.1| hypothetical protein GCWU000182_02724 [Abiotrophia defectiva ATCC
           49176]
 gi|229788274|gb|EEP24388.1| hypothetical protein GCWU000182_02724 [Abiotrophia defectiva ATCC
           49176]
          Length = 340

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 169/333 (50%), Positives = 219/333 (65%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL  LN    +P  W N  +A   M E   L N I    E+Q    D   L+E+A EE+D
Sbjct: 2   RLEELNRLISEPGFWDNADKANATMAEISSLKNGIESFDELQTMYDDIGALIEMAEEEND 61

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
            S++ E  D L+R K E +  +  +LLSG  D ++A + +HAGAGGTE+ DW  +L+R Y
Sbjct: 62  SSMVSEIGDELERFKTEFDTLRISTLLSGPYDKDNAIITLHAGAGGTEACDWTGILMRAY 121

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
           TRWA+ + FKTE ++   GEEAG+KS T+ I G NAYG+LK E GVHRLVRISP+++  +
Sbjct: 122 TRWADSKGFKTEVIDYLAGEEAGVKSCTIEITGTNAYGYLKSEHGVHRLVRISPFNAAGK 181

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           R TSF S  V P +++ I+IEI + D RIDT+RASGAGGQH+N T SA+RITH P+G+VV
Sbjct: 182 RQTSFVSCDVMPDIEEDIDIEIKDEDMRIDTFRASGAGGQHINKTSSAIRITHFPSGIVV 241

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
            CQ ERSQ +NKA+A  ML+AKLY L  Q+ E         + +I WG QIRSYVLQPY 
Sbjct: 242 SCQNERSQFQNKAKAMQMLKAKLYMLRQQENEAKEAGIRGEQKDIAWGSQIRSYVLQPYT 301

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           MVKD RTN+E  +   VLDG+ D F+ A L  K
Sbjct: 302 MVKDHRTNVEIGNAQTVLDGNFDPFINAYLKWK 334


>gi|332974657|gb|EGK11574.1| peptide chain release factor RF2 [Kingella kingae ATCC 23330]
          Length = 367

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 169/351 (48%), Positives = 241/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+++ + +    D+     RL  +   +EDP LW +   A+ + +ER+ L+  +  + +I
Sbjct: 16  LAKRNDDIRVYMDYQGKKDRLEEVVGLSEDPDLWNDPKRAQDIGKERKLLEGVVLTLDKI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + + DN  L+++ +EE D         ++  ++ ++   +F+ + +  AD N+ ++++ 
Sbjct: 76  TNGIDDNRELIDMVVEEGDADGFAAIIADVAELEKQMADLEFKRMFNQPADPNNCFIDIT 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE++DWA MLLRMYTR+AE++ FK E +E  DGE AGI +ATL I+G  AYG L+
Sbjct: 136 AGAGGTEAEDWAGMLLRMYTRYAERKGFKVEVIEQDDGEIAGINNATLRIEGEYAYGLLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DSN++RHTSFSS++VYP VDDS E+EI+ +D R DTYRASGAGGQH
Sbjct: 196 TETGVHRLVRYSPFDSNNKRHTSFSSVFVYPEVDDSFEVEINPADLRTDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITHIPTG+VVQ Q  RSQH+N+     MLR+KL+ELE++KR E     E  
Sbjct: 256 INKTDSAVRITHIPTGIVVQSQSSRSQHENRRIVMEMLRSKLFELEMRKRNEEKQALEEG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K+++GWG QIRSYVL     +KDLRT+ E  +   VLDGDLD F++A+L  
Sbjct: 316 KSDVGWGSQIRSYVLD-SSRIKDLRTSYEVGNTKAVLDGDLDGFIEASLKQ 365


>gi|332185456|ref|ZP_08387204.1| peptide chain release factor 2 [Sphingomonas sp. S17]
 gi|332014434|gb|EGI56491.1| peptide chain release factor 2 [Sphingomonas sp. S17]
          Length = 375

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 215/352 (61%), Positives = 274/352 (77%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++  L  L    DWD A++RL  LN + ED  LW +  +A+ +MRER+ LD AI+  + I
Sbjct: 12  INDALALLRRFLDWDRALRRLDELNARVEDQALWNDPKQAQAVMRERRRLDEAITATRAI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L   + L+ELA  E D  + +E   +L  +    E  + ++LL+GEAD+ND+Y+E++
Sbjct: 72  ENELSGTVELIELAEMEGDEELEKEAVTSLGDLAKRAEADKVKALLAGEADANDSYIEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTESQDWA ML RMYTRWAE+R  K E ++ H GE+AGIKSATLL+KG NAYG+ K
Sbjct: 132 AGAGGTESQDWAGMLQRMYTRWAERRGMKVELIDYHAGEQAGIKSATLLVKGENAYGYAK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS+WVYPV+DD+IE+EI+ES+ RIDTYRASGAGGQH
Sbjct: 192 VESGVHRLVRISPYDSAARRHTSFSSVWVYPVIDDNIEVEINESELRIDTYRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +NTTDSAVRITH+PTG+VVQCQ +RSQHKNKA+A+N LRA+LYE EL +RE +AN   ++
Sbjct: 252 INTTDSAVRITHLPTGIVVQCQNQRSQHKNKAEAYNQLRARLYERELAEREAVANAENAT 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KT+IGWG QIRSYVLQPYQ+VKDLRT +  T+P DVLDGDLD FM A L+ +
Sbjct: 312 KTDIGWGHQIRSYVLQPYQLVKDLRTGVTSTAPGDVLDGDLDAFMAAALSQR 363


>gi|325981471|ref|YP_004293873.1| hypothetical protein NAL212_0774 [Nitrosomonas sp. AL212]
 gi|325530990|gb|ADZ25711.1| hypothetical protein NAL212_0774 [Nitrosomonas sp. AL212]
          Length = 368

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 173/351 (49%), Positives = 241/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + L    D+D+   RL+ L    ED  +W +    + + RE++ L++ +  +  +
Sbjct: 16  LDSRASELRRFLDFDSKQTRLNELTRLLEDSTVWSDSKRTQEIGREKKSLEDTVVTLVSM 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + +L D   L ++A +E D + L   S + + I+  +   +F  + SG  DSN+ ++++ 
Sbjct: 76  EKQLGDAKELFQIAKDEADEAALVSISLDAENIEKAIANLEFRRMFSGPMDSNNCFVDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +G+GGTE+QDWA ML RMY R+ E++ F  E LE   G+ AGIKSATL I G  AYG+L+
Sbjct: 136 SGSGGTEAQDWAAMLERMYLRYCERQGFDVEILEESPGDIAGIKSATLKISGEYAYGFLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSFSS++VYP VDDSIEIEI+ +D RIDT+RASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSGNRRHTSFSSVFVYPEVDDSIEIEINPADLRIDTFRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSA+RITH PTG+VVQCQ  RSQH+NKA A  ML+++L+E EL+KR E     E +
Sbjct: 256 INKTDSAIRITHNPTGIVVQCQSGRSQHRNKADALTMLKSRLFEAELRKRNEEKQAIEEN 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KT+IGWG QIRSYVL     +KDLRTN+E  +  +VLDGDL+ F++A+L  
Sbjct: 316 KTDIGWGHQIRSYVLD-QSRIKDLRTNVEVGNTQNVLDGDLNSFIEASLKQ 365


>gi|320355124|ref|YP_004196463.1| peptide chain release factor 2 (bRF-2) [Desulfobulbus propionicus
           DSM 2032]
 gi|320123626|gb|ADW19172.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfobulbus
           propionicus DSM 2032]
          Length = 369

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 177/352 (50%), Positives = 238/352 (67%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  L    D D   +++  L  +T  P+ W N  EAK + R+   L + I   ++ 
Sbjct: 17  LKGKMLVLKEHLDLDGKREQVELLERQTVSPNFWDNQSEAKRVQRQLGQLQDLIGVWEKN 76

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D  +LL++A EE+D    QE    L  ++  VE  + E + SGE D+N+A L +H
Sbjct: 77  FGDLEDAEMLLDMAREENDQDTYQEVVSGLDDLRRRVELVELECMFSGEHDANNAILTIH 136

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDW  +LLRMY RWAE + FK + L++  G+EAG KS T+++KG  AYG+L+
Sbjct: 137 AGAGGTEAQDWVGILLRMYLRWAESKGFKADILDLLPGDEAGTKSVTIMVKGKYAYGYLR 196

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVRISP+D++ RRHTSF+S+ V P +DD +EIEI++ D RIDTYRASG+GGQH
Sbjct: 197 SEVGIHRLVRISPFDASGRRHTSFASVMVMPELDDDVEIEINDKDIRIDTYRASGSGGQH 256

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSA+RITH PTG+VVQCQ ERSQH NKA A  ML A+LYE E ++++      +  
Sbjct: 257 VNKTDSAIRITHFPTGIVVQCQNERSQHSNKATAMKMLMARLYEREKEEQQRTQENIQGD 316

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K EI WG QIRSYVLQPY+++KD RTN E+ +   VLDG LD F+KA L  +
Sbjct: 317 KKEIAWGSQIRSYVLQPYRLIKDHRTNTEEGNVDAVLDGRLDPFIKAYLLWQ 368


>gi|284008432|emb|CBA74885.1| peptide chain release factor 2 [Arsenophonus nasoniae]
          Length = 332

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 176/330 (53%), Positives = 229/330 (69%), Gaps = 1/330 (0%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             +N + E P +W     A+ L +ER  L+  +  I  +   L D   LL+LA+E DD  
Sbjct: 2   EEVNAELEQPDVWNEPERAQALGKERSSLEAIVETIDALIQGLDDVSGLLDLAIEADDED 61

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
              E    L +++ ++   +F  + SG+ DS + YL++ AG+GGTE+QDWA+ML+RMY R
Sbjct: 62  TFHEAVAELAQLEGKLGQLEFRRMFSGQYDSANCYLDLQAGSGGTEAQDWASMLMRMYLR 121

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           WAE + FKTE +E  DG+ AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRH
Sbjct: 122 WAESKGFKTEIIEASDGDVAGLKSATIKIIGEYAYGWLRTETGVHRLVRKSPFDSGGRRH 181

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSFSS ++YP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPTG+V QC
Sbjct: 182 TSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTGIVTQC 241

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           Q +RSQHKNK QA+  L+AKLYELE+QK+       E +K++IGWG QIRSYVL     +
Sbjct: 242 QNDRSQHKNKDQAFKQLKAKLYELEMQKKNADKQALEENKSDIGWGSQIRSYVLDD-SRI 300

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 301 KDLRTGVENRNTQAVLDGDLDKFIEASLKA 330


>gi|300174043|ref|YP_003773209.1| peptide chain release factor 2 [Leuconostoc gasicomitatum LMG
           18811]
 gi|299888422|emb|CBL92390.1| Peptide chain release factor 2 [Leuconostoc gasicomitatum LMG
           18811]
          Length = 372

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 147/353 (41%), Positives = 213/353 (60%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +   +       D +   + ++    +  +   W + ++A+ ++ E   L N       +
Sbjct: 13  IQENIARFRATLDLEALTEEIADFENRMTESGFWDDNVKAQKIIEENNVLKNRRDSFLNL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEV 121
             +  +  +L+E+  E+   S +    +      + ++E    E LL+   D+N+A LEV
Sbjct: 73  TSQAEEIDLLIEMLSEDVTDSEMMSELEESIVKAQKDIETYNLEQLLTEPYDANNAILEV 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H G+GGTES DW   L RMYTRWA++  F+ + L+ H G+EAGI SAT+ I G NA+G+L
Sbjct: 133 HPGSGGTESTDWGANLYRMYTRWAQQHGFQVDVLDYHAGDEAGIDSATIKITGHNAFGFL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E+GVHR VRISP+DS  RRHTSF S+ V P +DD+I+IEI + D ++D +R+ GAGGQ
Sbjct: 193 RSEKGVHRFVRISPFDSAGRRHTSFVSVDVMPELDDTIDIEIRDDDVKMDVFRSGGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN   + VR+TH PTG+VV    ER+Q+ N+  A  +L+ KLY+LEL+K+E        
Sbjct: 253 NVNKVSTGVRLTHEPTGIVVSSTVERTQYGNRDYAMRLLKGKLYQLELEKQEAERAALTG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K E GWG QIRSYVL PYQMVKD RT+ E   P  VLDGDLD F+ A L  +
Sbjct: 313 DKLENGWGSQIRSYVLHPYQMVKDHRTDYETNQPQQVLDGDLDPFINAYLQWQ 365


>gi|254461473|ref|ZP_05074889.1| peptide chain release factor 2 [Rhodobacterales bacterium HTCC2083]
 gi|206678062|gb|EDZ42549.1| peptide chain release factor 2 [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 375

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 197/352 (55%), Positives = 246/352 (69%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L  L    DWD A  RL   N + EDP LW +   A+ LM+ERQ L +A+     
Sbjct: 11  EIEKSLELLRQRLDWDTAEFRLEEFNARVEDPDLWNDPDAAQKLMQERQALVDAMGTYTS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L D + ++EL   E+D  ++ E  + L  +      K+ E+LL GEADSND +LE+
Sbjct: 71  IKQELSDQVEMIELGEMEEDEDVVTEAEEALNALAKLAAAKELEALLDGEADSNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTES DWA+ML RMY RWAEKR +K E      GEEAGIKSA   I G NAYGWL
Sbjct: 131 NSGAGGTESCDWASMLARMYVRWAEKRGYKVELQSESAGEEAGIKSAAYKISGQNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL KR  + N    
Sbjct: 251 HVNTTDSAVRITHAPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQIELDKRSALVNEAHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +  + GWG QIRSYVLQPYQMVKDLRTN E +    VLDGDLD FM ATLA+
Sbjct: 310 NAGDAGWGNQIRSYVLQPYQMVKDLRTNHETSDTKGVLDGDLDGFMGATLAM 361


>gi|84502908|ref|ZP_01001021.1| peptide chain release factor 2 [Oceanicola batsensis HTCC2597]
 gi|84388891|gb|EAQ01761.1| peptide chain release factor 2 [Oceanicola batsensis HTCC2597]
          Length = 374

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 190/352 (53%), Positives = 242/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  L    +W+ A  RL   N + EDP+LW +  +A+ LM++RQ L ++I+    I
Sbjct: 12  IEKSLELLRQRMNWETAQHRLEEFNARVEDPNLWDDPEKAQALMKDRQALVDSIAVHDSI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L DN  L+EL   EDD  ++ E    L+ +K     K+ E+LL+GEADSND +LE++
Sbjct: 72  RQELSDNAELIELGEMEDDQEVVAEAETALRALKERAAEKELEALLNGEADSNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA ML RMY RWAEKR +K E      G EAGIKS    I G NAYGWLK
Sbjct: 132 AGAGGTEACDWAQMLQRMYVRWAEKRGYKVELQSEEPGAEAGIKSCAYKITGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+   +R  TSF+S+WVYPVVDD+I+I+++ +D RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPFGKGTR-ETSFASVWVYPVVDDNIDIDVNPADIRIDTYRSSGAGGQH 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY+LEL +R    N    +
Sbjct: 251 VNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQLELDRRNAAINEAHEN 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K   GWG QIRSYVLQPYQMVKDLRT  E +    VLDG+LD FM ATLA+ 
Sbjct: 310 KGSAGWGNQIRSYVLQPYQMVKDLRTEHETSDTQGVLDGNLDGFMAATLAMD 361


>gi|296283820|ref|ZP_06861818.1| peptide chain release factor 2 [Citromicrobium bathyomarinum JL354]
          Length = 375

 Score =  269 bits (688), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 207/353 (58%), Positives = 263/353 (74%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   L  +    DW+ A++ L  LN + EDP LW +  +A+ +MRE++ L++AI  +  
Sbjct: 11  RIEAALALVRQSLDWERALRELDELNARVEDPTLWDDPKQAQAIMREQKRLESAIGTVNT 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I   + D +  +E+   E D  I+ E   +L+++    +  + ++LLSGEAD+NDAYLEV
Sbjct: 71  ISSEMADAIEFVEMGEAEGDDDIVNEGLTSLEKLAARADADKVQALLSGEADANDAYLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA ML+RMY RWAEKR FK E +E   GE+AGIKS TL IKG NAYG+ 
Sbjct: 131 HAGAGGTESQDWAEMLMRMYVRWAEKRGFKVETVEYQSGEQAGIKSVTLHIKGENAYGYA 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD IEIEI+ESD +IDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDDIEIEINESDLKIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV  Q +RSQHKN+A A +ML+A+L+E E+ +RE  A+   +
Sbjct: 251 HVNTTDSAVRITHQPTGIVVASQNDRSQHKNRATAMSMLKARLFEREMAEREAAASGEYA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            KTEIGWG QIRSYVLQPYQ+VKDLRT    T+P DVLDG +D F+ A LA +
Sbjct: 311 EKTEIGWGHQIRSYVLQPYQLVKDLRTGETSTAPGDVLDGAIDPFISAALAQR 363


>gi|116333278|ref|YP_794805.1| protein chain release factor B [Lactobacillus brevis ATCC 367]
 gi|116098625|gb|ABJ63774.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus
           brevis ATCC 367]
          Length = 343

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 158/328 (48%), Positives = 212/328 (64%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             +   P  W +   A++L+ E   +   +   + +  ++ D ++ LEL  EE D  +  
Sbjct: 9   EGQMAQPDFWDDAQAAQLLIDETNEMKKKVDEFQRLVTQVEDLMVALELLQEEPDAEMQA 68

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E   +    +  +   +   LL+ + D N+A LE+H GAGGTESQDW +MLLRMYTRWAE
Sbjct: 69  EFETDFATAQAALRQYRLNLLLNQKYDHNNALLEIHPGAGGTESQDWGDMLLRMYTRWAE 128

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           +  FK   L+   G+ AG+ S TL I G NAYG+L+ E+GVHRLVRISP+DS  RRHTSF
Sbjct: 129 QHDFKVTVLDYQPGDVAGLSSVTLAIAGRNAYGYLRSEKGVHRLVRISPFDSAGRRHTSF 188

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S+ V P +DDS++I+I+ ++ ++D YRASGAGGQHVN T SAVRITHIPTG+V Q Q +
Sbjct: 189 ASVDVLPELDDSVDIDINPAELKVDVYRASGAGGQHVNKTSSAVRITHIPTGIVTQSQAQ 248

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQ +N+  A  MLRAKLYE   +K+ +     E  + EIGWG QIRSYV  PY MVKD 
Sbjct: 249 RSQLQNRQTALAMLRAKLYERAEEKKAQEKAALEGDQMEIGWGSQIRSYVFHPYTMVKDH 308

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           RTN E  +   V+DGDLD F+ A L  +
Sbjct: 309 RTNYETGNGQAVMDGDLDPFIDAFLQWQ 336


>gi|289549137|ref|YP_003474125.1| peptide chain release factor 2 [Thermocrinis albus DSM 14484]
 gi|289182754|gb|ADC89998.1| peptide chain release factor 2 [Thermocrinis albus DSM 14484]
          Length = 372

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 173/353 (49%), Positives = 238/353 (67%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ +   +      D+  + L  L+      H+W    +AK +++ R+ L+  I  ++ 
Sbjct: 11  ELTERFEEVKESLKLDSMKEELKELDNLMASSHIWNQQEKAKKILQRRKWLEENIQQLEA 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            +  L D   LL +  EED  +        L++ +  ++  +  + LSGE D+ +AYL +
Sbjct: 71  TEKVLSDIRELLHITEEEDLETQTLLKE-ELEKAEQMIKDMEIRAFLSGEMDAKNAYLTI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG E+ DWA MLLRMY RWAEK  ++ E ++I   + AGIKSATLLIKGP AYG+L
Sbjct: 130 QAGAGGVEACDWAQMLLRMYRRWAEKHGYEVEVVDITPDDVAGIKSATLLIKGPYAYGYL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE GVHRLVRISP+D+N+RRHTSF+S+ V P +D+SI IEI E D  ++T+RASGAGGQ
Sbjct: 190 KGESGVHRLVRISPFDANARRHTSFASVTVVPQIDESINIEIREEDIEMETFRASGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN TD+AVRI H PTG+VV CQQERSQ++N+ +A  +L+AKLY+L+LQ+ EE     E 
Sbjct: 250 YVNKTDTAVRIRHKPTGIVVTCQQERSQYQNRMKALELLKAKLYQLKLQELEEKKRALEG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            KTEIGWG QIRSYV QPYQ+VKDLRT +E      V+DG++D F++A L  K
Sbjct: 310 EKTEIGWGHQIRSYVFQPYQLVKDLRTGVEIGDVESVMDGEIDPFIEAYLRWK 362


>gi|281357586|ref|ZP_06244073.1| peptide chain release factor 2 [Victivallis vadensis ATCC BAA-548]
 gi|281315843|gb|EFA99869.1| peptide chain release factor 2 [Victivallis vadensis ATCC BAA-548]
          Length = 364

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 180/354 (50%), Positives = 240/354 (67%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  ++  L      ++    ++ L  K   P  W N   A+  + +     N +   ++
Sbjct: 13  ELKGRIGHLEEFLHIEDRKAEMAELEQKMSAPDFWDNKESAQNTVAQLSACRNLLEPFRK 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +Q  + D    +ELA E+++      T  + +R+   ++  +  S LSG+ D ++ Y  V
Sbjct: 73  LQSEVEDYSASVELAAEDEEFLQE--TEISYRRLLKSLDRMEIMSFLSGKFDRSNLYFSV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTES DWANMLLRMY R+ E+R +K E +++  GEEAG+KSATL + G  AYG++
Sbjct: 131 HAGAGGTESCDWANMLLRMYRRYFERRGWKDEVIDLQPGEEAGVKSATLHVTGEFAYGYM 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE+GVHRLVRISP+DSN+RRHTSF S+ V+P +DD IEIEI ES  RIDTYR+SGAGGQ
Sbjct: 191 KGEKGVHRLVRISPFDSNARRHTSFVSVDVFPELDDDIEIEIDESQLRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSA+RITH+PTG+VV CQ ERSQHKN+A A  ML+AKLYE E +KR   A+    
Sbjct: 251 HVNTTDSAIRITHLPTGIVVCCQNERSQHKNRATAMKMLKAKLYEFEEEKRRNEADAIRG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            K E GWG QIRSYVLQPYQMVKDLRT +E +  + VLDGD+D+F++A L   +
Sbjct: 311 EKAENGWGSQIRSYVLQPYQMVKDLRTEVETSDTAGVLDGDIDEFIEAYLKSAR 364


>gi|109897685|ref|YP_660940.1| peptide chain release factor 2 [Pseudoalteromonas atlantica T6c]
 gi|109699966|gb|ABG39886.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudoalteromonas
           atlantica T6c]
          Length = 348

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 184/346 (53%), Positives = 239/346 (69%), Gaps = 1/346 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           ++  GG FD+D   +RL  +N + E P +W     A+ L +E+  L+  +  I  ++   
Sbjct: 1   MHRFGGTFDYDQKNERLEEVNRELESPDVWNEPERAQALGKEKVALEQVVETIVFLEQGC 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            +   LLELA+EE D   L E   +L  +   +E  +F  + SG  D+ND Y+++ +G+G
Sbjct: 61  VEVEELLELAVEESDQETLDEAEKDLAELVSRLETLEFRRMFSGPNDANDGYIDIQSGSG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWA+MLLRMY RW E   FKTE +E+ DG+ AGIKSAT+  +G  A+GWL+ E G
Sbjct: 121 GTEAQDWASMLLRMYLRWGEAHGFKTELIEVSDGDVAGIKSATIRFEGEYAFGWLRTETG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR SP+DS SRRHTSF+S++ YP +DD IEI+I  SD RIDTYRASGAGGQHVN T
Sbjct: 181 VHRLVRKSPFDSGSRRHTSFASVFAYPEIDDDIEIDIDPSDLRIDTYRASGAGGQHVNRT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH PT +VVQCQ +RSQHKNKAQA   L+AKLYE E+QK+ E     E SK++I
Sbjct: 241 DSAVRITHEPTNIVVQCQNDRSQHKNKAQAMKQLKAKLYEFEMQKQNEEKQTMEDSKSDI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           GWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 301 GWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIQASLK 345


>gi|284040585|ref|YP_003390515.1| hypothetical protein Slin_5751 [Spirosoma linguale DSM 74]
 gi|283819878|gb|ADB41716.1| hypothetical protein Slin_5751 [Spirosoma linguale DSM 74]
          Length = 358

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 155/349 (44%), Positives = 225/349 (64%), Gaps = 3/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  L G  D+DN  ++L+ L  +T  P  W +   A+ +M++ + L    +  +++
Sbjct: 9   LRARVEALRGYLDYDNKKEQLAELEQQTFQPEFWTDAARAEGVMKQVRGLKGWTTGYEKL 68

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D   L E     D      +           +E  + + +L  E D   A LE++
Sbjct: 69  NSQFGDLETLFEFYEAGDVTEEEVDEEGRKVTT--TLEELELKKMLGNEEDQLSAVLEIN 126

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTESQDWA+ML RMY RWAEK  +  + ++  +G+ AGIKSAT+ + GP AYG+LK
Sbjct: 127 AGAGGTESQDWADMLYRMYMRWAEKHGYGLKQVDYQEGDTAGIKSATIEVDGPLAYGFLK 186

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DSN+RRHTSF+S++ YP++DD+I IE++ +D   DT+R+ GAGGQ+
Sbjct: 187 SENGVHRLVRISPFDSNARRHTSFASVYAYPLIDDTINIEVNPADIDWDTFRSGGAGGQN 246

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++AVR+ H P+G++++CQQERSQ +NK  A  +L++KLYE+E+QKR       E+S
Sbjct: 247 VNKVETAVRLKHKPSGLIIECQQERSQLQNKEVAIRLLKSKLYEIEVQKRNAARAEVEAS 306

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K +I WG QIRSYVL   + VKD RT  + ++   VLDGDLD F+KA L
Sbjct: 307 KQKIEWGSQIRSYVLDD-RRVKDHRTGYQTSNTEAVLDGDLDPFIKAFL 354


>gi|225387178|ref|ZP_03756942.1| hypothetical protein CLOSTASPAR_00930 [Clostridium asparagiforme
           DSM 15981]
 gi|225046726|gb|EEG56972.1| hypothetical protein CLOSTASPAR_00930 [Clostridium asparagiforme
           DSM 15981]
          Length = 338

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 153/324 (47%), Positives = 217/324 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E+P  W +  ++  ++RE ++L + +   +E++    D  +++++  EE+D S++ +  
Sbjct: 1   MEEPGFWDDPEKSTRMVREVKNLKDDVETYRELEQEYDDIQVMIQMGYEENDASVIPDIQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L      +E  + + LLSGE D N+A L ++AGAGGTES DW +ML RMY RWAE++ 
Sbjct: 61  EMLDHFIKTLEDMRLKLLLSGEYDKNNAILRLNAGAGGTESCDWCSMLYRMYCRWAERKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+  DG+EAGIKS T+ + G NAYG+L+ E GVHRLVRISP+++  +R TSF S 
Sbjct: 121 FKYEVLDFLDGDEAGIKSVTIQVNGENAYGYLRSEHGVHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P ++  +++E++  D R+DTYR+SGAGGQH+N T SA+RITH+PTG+VV CQ ERSQ
Sbjct: 181 DVMPDIEADLDVEVNPDDIRVDTYRSSGAGGQHINKTSSAIRITHMPTGIVVTCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK +A  ML+AKLY L+ Q+    A        +IGWG QIRSYVLQPY MVKD RT 
Sbjct: 241 FQNKDKAMQMLKAKLYMLKQQESAAKAAGIRGEVKDIGWGNQIRSYVLQPYTMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  +   VLDG +D F+ A L  
Sbjct: 301 EESGNVDAVLDGSIDSFISAYLRW 324


>gi|94495879|ref|ZP_01302458.1| protein chain release factor B [Sphingomonas sp. SKA58]
 gi|94424571|gb|EAT09593.1| protein chain release factor B [Sphingomonas sp. SKA58]
          Length = 377

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 210/353 (59%), Positives = 263/353 (74%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   L  L    DWD A++RL  LN + EDP LW N  +A+ +MRER  LD+AI   + 
Sbjct: 13  RIDAALALLRQSLDWDRALRRLDELNARVEDPTLWDNAKQAQEVMRERTRLDSAIGATRA 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+    D   L+E+A  E D  ++ E    L+ +    +  + ++LL+GEADS D YLE+
Sbjct: 73  IEAEKSDTAELIEMAEAEGDEGMVDEAVAALKALADRADEDKIKALLAGEADSYDTYLEI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA ML RMY RWAE+R +K E ++   G++AGIKSAT L+KG NAYG+ 
Sbjct: 133 HAGAGGTESQDWAEMLSRMYRRWAERRGYKVELVDYQAGDQAGIKSATFLMKGENAYGYA 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD I+IE+ ESD +IDTYRASGAGGQ
Sbjct: 193 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDDIDIEVKESDLKIDTYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+P+G++V  Q +RSQHKN+A A NML+A+LYE EL++REE A+    
Sbjct: 253 HVNTTDSAVRITHVPSGIIVASQNDRSQHKNRATAMNMLKARLYEAELRRREEAASSDYQ 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +KTEIGWG QIRSYVLQPYQ+VKDLRT +  TSP DVLDG LD FM A L+ K
Sbjct: 313 AKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTSPDDVLDGALDPFMAAALSQK 365


>gi|323489912|ref|ZP_08095134.1| peptide chain release factor 2 [Planococcus donghaensis MPA1U2]
 gi|323396419|gb|EGA89243.1| peptide chain release factor 2 [Planococcus donghaensis MPA1U2]
          Length = 327

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 169/325 (52%), Positives = 214/325 (65%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W N   A+ ++ E   L   ++      +   +  + LEL  EEDD  + ++  
Sbjct: 1   MLDPDFWNNQETAQTVISELNGLKEVVNAYYSFMETQENMEMSLELLREEDDEDLHEDVD 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            ++++   ++   +   LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR 
Sbjct: 61  KDMKQFISDLADYELTMLLSEPYDKNNAILELHPGAGGTESQDWCSMLLRMYTRWAEKRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAG+KS TL I+G NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLAGDEAGVKSVTLGIRGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P     IEI+I   D +IDTYRASGAGGQH+NTTDSAVRITH PTG VV CQQERSQ
Sbjct: 181 EVMPEFTGEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHAPTGAVVTCQQERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A  ML+AKLY L++++ E         + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 IKNREKAMQMLKAKLYALKIEEEEARLLEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGD+D F+ + L  K
Sbjct: 301 FETGNLGAVMDGDIDGFINSLLRSK 325


>gi|302878965|ref|YP_003847529.1| hypothetical protein Galf_1754 [Gallionella capsiferriformans ES-2]
 gi|302581754|gb|ADL55765.1| hypothetical protein Galf_1754 [Gallionella capsiferriformans ES-2]
          Length = 367

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 180/351 (51%), Positives = 247/351 (70%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS + N L    D+D   +RL+ +    EDP +WQ+   A+ L RER+ L++ +  + +I
Sbjct: 16  LSLRSNELRRYLDYDTKQERLTEVCELAEDPAIWQDAKRAQELGRERKMLESVVFGLGKI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           Q  L D   L E++ EE+D + L  T+ ++  I+  V   +F  + +   D N  ++++ 
Sbjct: 76  QQDLTDAAELFEMSQEENDEASLMSTAADIDDIERRVAEMEFRRMFNHPMDPNSCFIDIQ 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA+ML+RMY R+AE++ ++ E LEI DG+ AGIK A++ + G  A+G L+
Sbjct: 136 AGSGGTEAQDWASMLMRMYVRYAERKGYQVEVLEISDGDVAGIKGASIKLIGEYAFGHLR 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+DS +RRHTSFSS++VYP VDDSIEIEI+ +D R+DTYRASGAGGQH
Sbjct: 196 TETGVHRLVRKSPFDSGNRRHTSFSSVFVYPEVDDSIEIEINPADLRVDTYRASGAGGQH 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N TDSAVRITHIPT +VVQCQ +RSQH+N+A+A  ML++++YE EL+KR E     E  
Sbjct: 256 INKTDSAVRITHIPTNIVVQCQSDRSQHRNRAEAMAMLKSRMYEEELRKRNEEKQEMEDG 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KT+IGWG QIRSYVL     +KDLRTN E  +   VLDGDLDDF+ A+L  
Sbjct: 316 KTDIGWGHQIRSYVLD-QSRIKDLRTNHEVGNTQGVLDGDLDDFISASLKQ 365


>gi|110802702|ref|YP_699445.1| peptide chain release factor 2 [Clostridium perfringens SM101]
 gi|123145940|sp|Q0SR12|RF2_CLOPS RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 364

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 155/350 (44%), Positives = 228/350 (65%), Gaps = 1/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +G   D  +  ++ + L  K ++   W +V +A+ + +E + + + I   K 
Sbjct: 14  ELKNNLKEMGASLDLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKN 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +R+ D  +L EL  E D+ +  +     ++ +  E++  + E++LSGE D N+A L +
Sbjct: 74  LNERIDDVEVLKELMEENDEETAKE-IISEVKALSKEIDTLKIETILSGEYDRNNAILTL 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H G GG+++ DW  MLLRMYTRW EK+ +  E ++   G+EAG+KS TL +KG  AYG+L
Sbjct: 133 HTGVGGSDANDWTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+G+HRLVRISP+++N +R TSF+S+ V P +    +IEI+  D RIDTYRA GAGGQ
Sbjct: 193 KAEKGIHRLVRISPFNANGKRQTSFASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+VVQCQ ERSQ  N+  A  ML++KL EL+ +  +E       
Sbjct: 253 HVNKTESAVRITHIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              ++GWG QIRSYV  PY MVKD RTN+E ++ + V+ GD+D+F+ A L
Sbjct: 313 ELKDMGWGSQIRSYVFHPYSMVKDHRTNVETSNVNGVMGGDIDNFIIAYL 362


>gi|187734757|ref|YP_001876869.1| peptide chain release factor 2 [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187424809|gb|ACD04088.1| peptide chain release factor 2 [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 329

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 163/326 (50%), Positives = 217/326 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +   A+ LM E   L + +     ++ RL D    +ELA E DD  + +E  
Sbjct: 1   MSAPDFWDDQNAARALMAEVNPLKHRMEAFSALKSRLEDIDAAIELAQEADDDDLGREAV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +   R +  +   +  +LL+G  D    Y+ +HAGAGGTE+ DWA+MLLRMY RW E+R 
Sbjct: 61  EEFARWQKSLADFELLTLLNGPQDQASCYVTIHAGAGGTEACDWASMLLRMYIRWCERRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F    LE  DG++AGI+S TL + G  AYG+LK E+G+HRLVRISP+DS  +RHTSF+S+
Sbjct: 121 FSVTYLESTDGDDAGIRSVTLKVDGEYAYGYLKNERGIHRLVRISPFDSAGKRHTSFASL 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
              P V DSI IEI + D ++DTYR+ G GGQ+VN  ++AVRITHIP+GV+V CQ ERSQ
Sbjct: 181 DATPEVSDSINIEILDKDLKVDTYRSGGKGGQNVNKVETAVRITHIPSGVIVACQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK +A NMLRAKLY++E  K++  A+   S K +IGWG QIRSYV QPYQMVKDLRT 
Sbjct: 241 LRNKEEAMNMLRAKLYQIEEDKKQAEADRQYSEKGDIGWGNQIRSYVFQPYQMVKDLRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355
           +E  +  DV+DG+LD F++A L   K
Sbjct: 301 VESGNIQDVMDGNLDPFIEAMLRGHK 326


>gi|295398527|ref|ZP_06808561.1| peptide chain release factor RF2 [Aerococcus viridans ATCC 11563]
 gi|294973250|gb|EFG49043.1| peptide chain release factor RF2 [Aerococcus viridans ATCC 11563]
          Length = 353

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 164/346 (47%), Positives = 219/346 (63%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GGLFD +     L+        P  W +  +A+ ++     L         + D  
Sbjct: 1   MTASGGLFDLEKMEADLAEYEADMVQPGFWDDSEKAQSVIDANNALKKVYDEFNNLADEY 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            +  +L E+  EE D  + +E  + +Q  + ++   +   LLSGE D NDA LE+H GAG
Sbjct: 61  EELTLLNEMVKEEPDPDLSKELVNRIQAFQAKISAYERNILLSGEYDHNDALLEIHPGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTESQDWA+MLLRMY RWA++  ++   L+  +G+EAGIKS TL IKG NAYG+LK E G
Sbjct: 121 GTESQDWASMLLRMYQRWADQHDYQVTTLDFQNGDEAGIKSVTLEIKGLNAYGFLKSEDG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVRISP+DSN RRHTSF+S+ + PV+D + EIEI ESD  +D +RASGAGGQH+N T
Sbjct: 181 IHRLVRISPFDSNKRRHTSFASVEIMPVLDQNTEIEIDESDIEMDVFRASGAGGQHINKT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+TH+PTG+VV  Q +RSQ +N+  A  ML+AKL  L  +K  +  +     K+EI
Sbjct: 241 SSAVRLTHVPTGIVVASQGQRSQFQNRDTAMKMLQAKLAHLLAEKNAKELDEIRGEKSEI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            WG QIRSYV  PY MVKD RT+ E  +   V+DGDLD F+ A L 
Sbjct: 301 AWGSQIRSYVFHPYNMVKDHRTDYETANVQGVMDGDLDGFIDAYLK 346


>gi|163857078|ref|YP_001631376.1| peptide chain release factor 2 [Bordetella petrii DSM 12804]
 gi|163260806|emb|CAP43108.1| peptide chain release factor 2 [Bordetella petrii]
          Length = 337

 Score =  268 bits (686), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 168/335 (50%), Positives = 241/335 (71%), Gaps = 1/335 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             +RL  +N + EDP +W +   A+ L RE++ L++ ++ +  ++  + D L L ELA  
Sbjct: 2   KAERLQVVNAELEDPAVWNDPKHAQDLGREKKSLEDVVTTLTALRSGVADALELFELASA 61

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +DD + L+    +    + ++E  +F  + S  AD  + +L++ AGAGGTE+QDWA+MLL
Sbjct: 62  DDDDATLESIESDADGFQQQLEGLEFRRMFSNPADPLNCFLDIQAGAGGTEAQDWASMLL 121

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           R Y ++AE++ FK E LE  +GE AGIKSAT+ ++G  A+G+L+ E GVHRLVR SP+DS
Sbjct: 122 RQYLKYAERKGFKAEVLEESEGEVAGIKSATIKLEGDYAFGYLRTETGVHRLVRKSPFDS 181

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           +  RHTSF+S++VYP VDDS EI+++ +D R+DTYRASGAGGQH+N TDSAVR+TH+PTG
Sbjct: 182 SGGRHTSFASVFVYPEVDDSFEIDVNPADLRVDTYRASGAGGQHINKTDSAVRLTHLPTG 241

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VVQCQ +RSQH+N+A+A  ML++KLYELE++ R       E SKT++GWG QIRSYVL 
Sbjct: 242 IVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMAEQQKLEDSKTDVGWGHQIRSYVLD 301

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
               +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 302 -QSRIKDLRTNVEISNTQKVLDGDLDTFIQASLKQ 335


>gi|154687644|ref|YP_001422805.1| hypothetical protein RBAM_032440 [Bacillus amyloliquefaciens FZB42]
 gi|154353495|gb|ABS75574.1| PrfB [Bacillus amyloliquefaciens FZB42]
          Length = 327

 Score =  268 bits (686), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 167/325 (51%), Positives = 219/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W +  +A+ ++ E   L   ++   ++ +   +  +  +L  EE D  + QE  
Sbjct: 1   MAEPEFWNDQQKAQTVINEANGLKEYVNSYHQLSESHEELQMTHDLLKEEPDQDLQQELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L+ +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+R 
Sbjct: 61  KELKSLTKELNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  ++ I+I+I   D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ
Sbjct: 181 EVMPEFNEEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A  ML+AKLY+  +++++   +     + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 IKNRDRAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGD+D F+ A L  K
Sbjct: 301 TEMGNVQAVMDGDIDIFIDAYLRSK 325


>gi|148652647|ref|YP_001279740.1| peptide chain release factor 2 [Psychrobacter sp. PRwf-1]
 gi|148571731|gb|ABQ93790.1| bacterial peptide chain release factor 2 (bRF-2) [Psychrobacter sp.
           PRwf-1]
          Length = 325

 Score =  268 bits (686), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 172/324 (53%), Positives = 226/324 (69%), Gaps = 1/324 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P LW +   A  + +E+  LD  I+ I  +   L D   +LELA+E DD  +L+E  
Sbjct: 1   MASPELWNDPERATKISKEKSQLDAVITTITGLDTTLEDAAAMLELAVEADDEGLLEEVQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L   +  VE  +F+ +  GE D+N+ ++++ +G+GGTE+QDWA MLLRMYTRW E   
Sbjct: 61  NELNAAQALVEDLEFKRMFDGEMDANNCFVDIQSGSGGTEAQDWAEMLLRMYTRWCESHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E +E+  G  AG+KSA+  + G  A+GWL+ E GVHRLVR SP+DSN+ RHTSF+++
Sbjct: 121 FKVEIIEVSAGSVAGVKSASFKVSGDYAFGWLRTETGVHRLVRKSPFDSNNGRHTSFAAV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           +V P +DD  EI+I+ +D RIDTYR+SGAGGQHVNTTDSAVRITH+PTG VVQCQ ERSQ
Sbjct: 181 FVSPEIDDDFEIDINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTGTVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NKA A  MLRAKLYELE+QKR E     E +K+++GWG QIRSYVL     +KDLRT 
Sbjct: 241 HGNKATAMKMLRAKLYELEMQKRMEQQQAVEDNKSDVGWGSQIRSYVLDD-SRIKDLRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
           +E  +   VLDGDLD F++A+L  
Sbjct: 300 VETFNTGAVLDGDLDQFIEASLKA 323


>gi|294010764|ref|YP_003544224.1| peptide chain release factor RF-2 [Sphingobium japonicum UT26S]
 gi|292674094|dbj|BAI95612.1| peptide chain release factor RF-2 [Sphingobium japonicum UT26S]
          Length = 375

 Score =  268 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 210/353 (59%), Positives = 265/353 (75%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   L+ L    DWD A++RL  LN + EDP LW N  +A+ +MRER  LD AI   + 
Sbjct: 11  RIDAALDLLRRFLDWDRALRRLDELNARVEDPTLWDNQRQAQEVMRERTRLDAAIGATRA 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I     D   L+E+A  E D  ++ E   +L+ +    +  + ++LL+GEAD++D YLE+
Sbjct: 71  IDSEKTDTAELIEMAEAEGDEDMVNEAIASLKALADRADEDKIKALLAGEADASDTYLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA ML RMY RWAE+R +K E ++   G++AGIKSAT L KG NAYG+ 
Sbjct: 131 HAGAGGTESQDWAEMLSRMYRRWAERRGYKVELVDYQAGDQAGIKSATFLFKGENAYGYA 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDS++RRHTSFSS+WVYPV+DD+IEIE++ESD +IDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFSSVWVYPVIDDNIEIEVNESDLKIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+P+G++V  Q +RSQHKN+A A NML+A+LYE EL++REE A+    
Sbjct: 251 HVNTTDSAVRITHVPSGIIVASQNDRSQHKNRATAMNMLKARLYEAELRRREEAASGEYQ 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +KTEIGWG QIRSYVLQPYQ+VKDLRT +  TSP DVLDG LD FM A L+ K
Sbjct: 311 AKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTSPDDVLDGALDPFMAAALSQK 363


>gi|254386617|ref|ZP_05001914.1| peptide chain release factor 2 [Streptomyces sp. Mg1]
 gi|194345459|gb|EDX26425.1| peptide chain release factor 2 [Streptomyces sp. Mg1]
          Length = 369

 Score =  268 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 161/353 (45%), Positives = 218/353 (61%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMGSIEAVLDLDKLRAEIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTETL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA E DD   L E  + L  ++  ++  +  +LLSGE    +A + + 
Sbjct: 73  RGRIDDLAVLFELAQEMDDADTLAEAENELTSVRKALDEMEVRTLLSGEYAEREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  + TE  E    EEAGIKS T ++K P AYG L 
Sbjct: 133 AEAGGVDASDFAERLQRMYLRWAERHGYPTEVYETSYAEEAGIKSTTFVVKAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ S  +EI E + RID YRASG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVESSDHVEIDEGELRIDVYRASGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A N+L+AKL  LE +++EE A +    
Sbjct: 253 VNTTDSAVRITHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQAKMDALK 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  VLDG++D F++A +  +K
Sbjct: 311 DGGSSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLEAGIRWRK 363


>gi|224475896|ref|YP_002633502.1| peptide chain release factor RF-2, major part [Staphylococcus
           carnosus subsp. carnosus TM300]
 gi|222420503|emb|CAL27317.1| peptide chain release factor RF-2, major part [Staphylococcus
           carnosus subsp. carnosus TM300]
          Length = 333

 Score =  268 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 156/325 (48%), Positives = 220/325 (67%), Gaps = 1/325 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              DP+ W +  +A+ ++ +   L + ++  ++++  L D     EL  EE D  +  + 
Sbjct: 1   MMTDPNFWDDQNKAQEIIDKNNALKHVVNGYRDLEAELEDMSATHELLAEEFDEDLKADL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            +     K +++  + + LL+G  D+N+A LE+H GAGGTESQDWA+MLLRMY R+AE++
Sbjct: 61  EEEANAFKDKLDQFELQLLLNGPYDANNAILELHPGAGGTESQDWASMLLRMYQRYAEQQ 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E  +   G+EAG+KS TL+IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S
Sbjct: 121 GFKVEFADYLPGDEAGVKSVTLVIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 180

Query: 209 IWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
             V P   ++ IEIE++  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ER
Sbjct: 181 CDVIPEFSNNEIEIEVNPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KN+  A  ML++KLY+L+L+++E         + EIGWG QIRSYV  PY MVKD R
Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLA 352
           TN E  + + V+DG++  F++A L 
Sbjct: 301 TNEETGNVNAVMDGEIGPFIEAYLR 325


>gi|257092654|ref|YP_003166295.1| peptide chain release factor 2 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257045178|gb|ACV34366.1| peptide chain release factor 2 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 347

 Score =  268 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 172/343 (50%), Positives = 239/343 (69%), Gaps = 1/343 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+D    +L  +  + EDP +W N   A+ L RER+ L+N +  +  + D L D  
Sbjct: 4   GGIFDYDQKADQLKTVARELEDPAVWDNAERAQELGRERRSLENVVLTLNRVADSLRDTG 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L  +A EEDD   L   + ++  I+ EV   +F  + +  AD  + ++++ AGAGGTE+
Sbjct: 64  ELFAMAREEDDDETLNAVAADIDGIEKEVSGLEFRRMFNNPADPLNCFVDIQAGAGGTEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMY R+AE++ +  E LE  +GE AGIK+A++ I G  AYG L+ E G+HRL
Sbjct: 124 QDWAAMLLRMYLRYAERKGYAVEVLEESEGEVAGIKTASIKISGEYAYGMLRSETGIHRL 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DSN+RRHTSF S+  YP +DDS E+EI+ ++ RIDTYRASGAGGQH+N TDSAV
Sbjct: 184 VRKSPFDSNARRHTSFCSVSAYPEIDDSFEVEINPAELRIDTYRASGAGGQHINKTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH+PT +VVQCQ +RSQH+N+A+A  ML++++YE E++KR+      E +K++IGWG 
Sbjct: 244 RITHLPTNIVVQCQNDRSQHRNRAEAMAMLKSRIYEAEMRKRQTEQQKLEDAKSDIGWGH 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QIRSYVL     +KDLRTN+E  +   VLDGDLD F++A+L  
Sbjct: 304 QIRSYVLD-QSRIKDLRTNVEVGNTQGVLDGDLDQFIEASLKQ 345


>gi|240850608|ref|YP_002972008.1| peptide chain release factor 2 [Bartonella grahamii as4aup]
 gi|240267731|gb|ACS51319.1| peptide chain release factor 2 [Bartonella grahamii as4aup]
          Length = 375

 Score =  268 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 226/353 (64%), Positives = 283/353 (80%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + +  L G  DWD +++RL +LN K EDP LW +  +A+ +MRERQ LD++I+ +  
Sbjct: 11  EIQKAIQLLRGHLDWDQSLKRLEYLNQKAEDPSLWDDAQQAQDMMRERQRLDDSINGLLS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
               L + + L+ +  EE D  I+ +  ++++ +K E++ +Q + LLSGEAD ND YLEV
Sbjct: 71  FTKTLEECIELIAMGEEESDVEIIADAENSIRNLKNEIDKRQIDVLLSGEADPNDTYLEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA+MLLRMY RWAE+ + K E LEIHDGEEAGIKSAT+L+KG NAYG L
Sbjct: 131 HAGAGGTESQDWASMLLRMYMRWAEQHEMKVEILEIHDGEEAGIKSATILVKGHNAYGML 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DSN++RHTSF+SIWVYPV+DD+IE+++SE+D RIDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPFDSNAKRHTSFASIWVYPVIDDNIEVDVSEADVRIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+LYE EL+KREE  N  ES
Sbjct: 251 HVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLYEEELKKREEETNAAES 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           SKTEIGWG QIRSYVLQPYQ+VKDLRT IE T P  VL+G+LD F++A LA +
Sbjct: 311 SKTEIGWGHQIRSYVLQPYQLVKDLRTGIENTDPQSVLNGNLDAFIEAALARR 363


>gi|329928717|ref|ZP_08282566.1| peptide chain release factor 2 [Paenibacillus sp. HGF5]
 gi|328937498|gb|EGG33916.1| peptide chain release factor 2 [Paenibacillus sp. HGF5]
          Length = 339

 Score =  268 bits (685), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 168/332 (50%), Positives = 226/332 (68%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           +     K   P  W +  +A+ L+ E   + +++   +++Q    D ++++ELA EE D 
Sbjct: 2   IENFEEKMAAPDFWDDNEKAQALIAEMNSVKSSVDQYQKLQADYDDAVVMIELADEEGDD 61

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
           S+  E  + ++ +   VE  + + LL+   D  +A LE+H GAGGTESQDW  ML RMYT
Sbjct: 62  SLAGEIGETIKDLVGRVEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLHRMYT 121

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           RWAEKR FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RR
Sbjct: 122 RWAEKRGFKVETLDYLPGDEAGIKSVTLLIKGFNAYGYLKAEKGVHRLVRISPFDSSGRR 181

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSF S  V P ++D +E++I   D +IDTYRASGAGGQH+NTTDSAVRITH+PTGVVV 
Sbjct: 182 HTSFVSCDVVPEINDEVELDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGVVVT 241

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
           CQ ERSQ KN+ +A  MLR+KLYE +++++++        +++I WG QIRSYV  PY M
Sbjct: 242 CQNERSQIKNRERAMTMLRSKLYERKIEEQQKELAEIRGEQSDIAWGSQIRSYVFHPYSM 301

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           VKD RT +E  +   V+DGDLD F+   L  +
Sbjct: 302 VKDHRTQVETGNIGAVMDGDLDGFIDGYLRSQ 333


>gi|253580007|ref|ZP_04857274.1| peptide chain release factor 2 [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848526|gb|EES76489.1| peptide chain release factor 2 [Ruminococcus sp. 5_1_39BFAA]
          Length = 343

 Score =  268 bits (685), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 157/336 (46%), Positives = 225/336 (66%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           N  Q++  L  + E P  W +   ++  M+E + + + +   + +  ++ D   ++E+  
Sbjct: 3   NKEQKVEELEREMEAPDFWDDAEVSQKKMKELKDMKDDMETYQNLVTQMEDMETMIEMGY 62

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           EE+D +++ E  + L   + + +  + ++LLSGE DS +A ++++AGAGGTE+ DW  ML
Sbjct: 63  EENDPALIPEIQEMLDEFQKDFDNIRIKTLLSGEYDSENAIIKLNAGAGGTEACDWCGML 122

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY+RWA+K+ F  E L+  DG+EAGIKS T  + G NAYG+LK E+GVHRLVRISP++
Sbjct: 123 YRMYSRWADKKGFTLEVLDYLDGDEAGIKSVTFQVNGTNAYGYLKSEKGVHRLVRISPFN 182

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +  +R TSF S  V P +   +++EI++ + RIDTYR+SGAGGQH+N T SA+RITH PT
Sbjct: 183 AAGKRQTSFVSCDVMPDIKKDLDVEINDDEIRIDTYRSSGAGGQHINKTSSAIRITHYPT 242

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ ERSQH NK +A  ML+AKLY L+ Q+ EE  +      T+IGWG QIRSYV+
Sbjct: 243 GIVVQCQNERSQHMNKDKAMQMLKAKLYLLKQQEAEEKLSGIRGEVTDIGWGNQIRSYVM 302

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QPY MVKD RTN E  +   VLDG +D F+ A L  
Sbjct: 303 QPYTMVKDHRTNEETGNVDAVLDGGIDIFINAYLKW 338


>gi|224503251|ref|ZP_03671558.1| peptide chain release factor 2 [Listeria monocytogenes FSL R2-561]
          Length = 338

 Score =  268 bits (685), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 169/336 (50%), Positives = 220/336 (65%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              R++ L  +  DP+ W +   A+ ++ E             +++      I LEL  E
Sbjct: 1   MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D  + +E   +++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLL
Sbjct: 61  EADEDLQEELEKDIKAYMATISAFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLL 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS
Sbjct: 121 RMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDS 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           + RRHTSF S+ V P +D  IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G
Sbjct: 181 SGRRHTSFVSVDVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSG 240

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV CQ ERSQ KN+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  
Sbjct: 241 IVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFH 300

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN E  +   V+DGDLDDF+ A L  +
Sbjct: 301 PYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 336


>gi|254454841|ref|ZP_05068278.1| peptide chain release factor 2 [Octadecabacter antarcticus 238]
 gi|198269247|gb|EDY93517.1| peptide chain release factor 2 [Octadecabacter antarcticus 238]
          Length = 375

 Score =  268 bits (685), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 192/353 (54%), Positives = 251/353 (71%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L+ L    +WD A  RL   N + EDP LW +   A+ LMR+RQ L +AI+  + 
Sbjct: 11  EIEKSLSLLAQRMEWDTASHRLEEFNARVEDPTLWDDPDAAQKLMRDRQSLVDAIASYEA 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L D++ L+E+   EDD  ++ E  D L+ +  +   K+ E+LL+GEAD+ND +LE+
Sbjct: 71  IRQELSDHVELIEMGEMEDDAGVVTEAEDGLKVLAAKAAEKELEALLNGEADANDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTE+ DWA ML RMY RWAE++ +K E      GEE GIKSA+  I G NAYGWL
Sbjct: 131 NSGAGGTEACDWAAMLARMYVRWAERKGYKVELQSESAGEEVGIKSASYKISGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++E+ KR  + N    
Sbjct: 251 HVNTTDSAVRITHAPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQIEMDKRSALVNEVHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +  + GWG QIRSYVLQPYQMVKDLRT  E +    VLDGDLD FM ATLA+ 
Sbjct: 310 NAGDAGWGNQIRSYVLQPYQMVKDLRTRHETSDTQGVLDGDLDAFMGATLAMD 362


>gi|89055024|ref|YP_510475.1| peptide chain release factor 2 [Jannaschia sp. CCS1]
 gi|88864573|gb|ABD55450.1| bacterial peptide chain release factor 2 (bRF-2) [Jannaschia sp.
           CCS1]
          Length = 375

 Score =  268 bits (685), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 191/353 (54%), Positives = 243/353 (68%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+   L  LG   D + A  RL   N + EDP+LW +  +A+ LMR+RQ L + +   + 
Sbjct: 11  KIRNSLTLLGQRMDIETAPHRLEEFNARVEDPNLWNDPEKAQKLMRDRQVLVDKMKQYET 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  + DN  L+EL   EDD  ++ E    L  +  E   K+ E+LL GEADSND +LE+
Sbjct: 71  IRQGVDDNAELIELGEMEDDAEVVAEAEAALTALVDEAAAKELEALLDGEADSNDTFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTES DWA+ML RMYTRWAEK+ +  +      GEEAGIKSA   I G NAYGWL
Sbjct: 131 NSGAGGTESCDWASMLARMYTRWAEKQGYDVDLQSFSAGEEAGIKSAVYKISGHNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD RIDTYR+SGAGGQ
Sbjct: 191 KSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL KR    N    
Sbjct: 251 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDKRSAKVNEVHE 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +  + GWG QIRSYVLQPYQMVKDLRT  E +    VLDG++D  M + LA+ 
Sbjct: 310 NAGDAGWGNQIRSYVLQPYQMVKDLRTAFETSDTQGVLDGNIDGLMASVLAMD 362


>gi|110834510|ref|YP_693369.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2]
 gi|110647621|emb|CAL17097.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2]
          Length = 356

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 172/350 (49%), Positives = 228/350 (65%), Gaps = 8/350 (2%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+    +RL+ +  + E P +W +   A+ L +ER  L+  +  I +    L D  
Sbjct: 6   GGIFDYVQKSERLTEVERELESPDVWNDPPYAQALGKERSQLEGVVKTIDDASQGLEDTS 65

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LL+L +EE D   L E   +L+ ++  V   +F  + SG+ D   AYL++ +G+GGTE+
Sbjct: 66  ALLDLVVEEGDEDTLSEVESDLRDLEKMVADLEFRRMFSGQMDPCSAYLDIQSGSGGTEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA M+LRMY RW E   FKTE +E   G+ AGIKSAT+  +G  AYGWL+ E GVHRL
Sbjct: 126 QDWAEMMLRMYLRWGEAHGFKTELVEASAGDVAGIKSATVRFEGDYAYGWLRTETGVHRL 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS  RRHTSFSS++V P VDD I+IEI   + R+DTYRASGAGGQHVN TDSAV
Sbjct: 186 VRKSPFDSGGRRHTSFSSVFVSPEVDDDIDIEIDLGNMRVDTYRASGAGGQHVNRTDSAV 245

Query: 251 RITH-------IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           R+T+           VV QCQ ERSQH+NK +A  M++AK+YELE+Q+R       E+SK
Sbjct: 246 RLTYLFKDDGGTEHTVVTQCQSERSQHQNKDKAMKMMQAKVYELEMQRRNAEKQALENSK 305

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            +IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 306 ADIGWGSQIRSYVLDD-ARIKDLRTGVENRNTQAVLDGALDPFIEASLKA 354


>gi|47096102|ref|ZP_00233703.1| peptide chain release factor 2 [Listeria monocytogenes str. 1/2a
           F6854]
 gi|258611482|ref|ZP_05232771.2| peptide chain release factor 2 [Listeria monocytogenes FSL N3-165]
 gi|258612274|ref|ZP_05269486.2| peptide chain release factor 2 [Listeria monocytogenes F6900]
 gi|293596674|ref|ZP_05263420.2| peptide chain release factor 2 [Listeria monocytogenes J2818]
 gi|47015563|gb|EAL06495.1| peptide chain release factor 2 [Listeria monocytogenes str. 1/2a
           F6854]
 gi|258600468|gb|EEW13793.1| peptide chain release factor 2 [Listeria monocytogenes FSL N3-165]
 gi|258610392|gb|EEW23000.1| peptide chain release factor 2 [Listeria monocytogenes F6900]
 gi|293591414|gb|EFF99748.1| peptide chain release factor 2 [Listeria monocytogenes J2818]
          Length = 338

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 169/336 (50%), Positives = 220/336 (65%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              R++ L  +  DP+ W +   A+ ++ E             +++      I LEL  E
Sbjct: 1   MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D  + +E   +++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLL
Sbjct: 61  EADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLL 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS
Sbjct: 121 RMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDS 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           + RRHTSF S+ V P +D  IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G
Sbjct: 181 SGRRHTSFVSVDVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSG 240

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV CQ ERSQ KN+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  
Sbjct: 241 IVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFH 300

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN E  +   V+DGDLDDF+ A L  +
Sbjct: 301 PYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 336


>gi|312792717|ref|YP_004025640.1| hypothetical protein Calkr_0478 [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179857|gb|ADQ40027.1| hypothetical protein Calkr_0478 [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 372

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 170/349 (48%), Positives = 232/349 (66%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
              L  +    D D     L  L  +T  P  WQ++  ++ ++++ + L + I   +++ 
Sbjct: 15  EEDLKEMRVSLDIDRLESELKSLENETSSPDFWQDLENSQKVLQKIKRLKDKIERFQKLY 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            +  D  +L EL+L+E +  + +E    L  ++ ++E  + E LL+G  D N+A L +HA
Sbjct: 75  SQWEDLKVLTELSLDEGNHEMAEELEKELLDLERKIEDFKIEVLLNGPYDKNNAILSIHA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDWA MLLRMYTRWA K+ +K E L+I  GEEAGIK+ T+ I G NAYG+LK 
Sbjct: 135 GAGGTEAQDWAEMLLRMYTRWAVKKGYKVETLDILPGEEAGIKNVTVRIVGENAYGYLKA 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+D+  RRHTSF+++ V P V+D  +IEI E D  IDT+RASGAGGQHV
Sbjct: 195 EKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTFRASGAGGQHV 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRI HIPTG+VV CQ ERSQHKN+  A  +L+AKL EL+ ++R E     +  +
Sbjct: 255 NKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQ 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           TEIGWG QIRSYV  PY +VKD RT  E  +   V+DG++D F+ A L 
Sbjct: 315 TEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363


>gi|297171663|gb|ADI22657.1| protein chain release factor B [uncultured Gemmatimonadales
           bacterium HF0500_22O06]
          Length = 356

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 181/345 (52%), Positives = 236/345 (68%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
             LGG FD ++  +RL  L+ +   P  W +  +AK  + E   L   +     +  R+ 
Sbjct: 4   KSLGGTFDLESRQERLRVLDQEMVQPGFWDSPDQAKATIDESNRLKGWVDPWSSLDARVS 63

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           +   L+EL  EE+D  +  E +  L  ++ ++E  +  ++L G  D  DA + +H GAGG
Sbjct: 64  ELTALVELLEEEEDADLEAEFTRGLASVEKDLEVLEVRTMLQGGDDHRDALVTIHPGAGG 123

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            ESQDWA ML+RMYTRW+E+R F  E L++   EE GIKSATL IKG  AYG+LK E GV
Sbjct: 124 LESQDWAGMLMRMYTRWSERRGFGVEVLDLQSAEEGGIKSATLEIKGECAYGYLKAEGGV 183

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVRISP+D  SRRHTSF+S+++YP+V+D IEI+I ESD RIDTYRASGAGGQHVN TD
Sbjct: 184 HRLVRISPFDQQSRRHTSFASVFIYPLVEDGIEIDIDESDLRIDTYRASGAGGQHVNKTD 243

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH PTG+V  CQQERSQHKN++ A  MLRA LY+  LQ++E    + E++KTEIG
Sbjct: 244 SAVRITHEPTGIVTTCQQERSQHKNRSTAMKMLRAALYQHALQEQERERAVLEATKTEIG 303

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +G QIRSYV QPY MV D RT ++ T+   V+DGDLD F++A L 
Sbjct: 304 FGNQIRSYVFQPYTMVNDHRTELKITNVQGVMDGDLDPFIEAYLK 348


>gi|20807024|ref|NP_622195.1| protein chain release factor B [Thermoanaerobacter tengcongensis
           MB4]
 gi|20515510|gb|AAM23799.1| Protein chain release factor B [Thermoanaerobacter tengcongensis
           MB4]
          Length = 347

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 175/342 (51%), Positives = 235/342 (68%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           LFD +   + +  +  +  DP  W ++ +++ L ++++ L   +   + +  R  D   L
Sbjct: 3   LFDVEGIKKEIEDIEKQMSDPSFWSDLKKSQELSKKQKALKELLEEYESLLSRCEDLYTL 62

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +EL LEE D SI +E     + +K EVE  +  +LLSG  D N+A L +HAG+GGTE+QD
Sbjct: 63  IELGLEEGDESIAEEVEREYKELKKEVENLKIRTLLSGPYDKNNAILSIHAGSGGTEAQD 122

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA MLLRMYTRWA  + F+ E L+  +GEEAGIKSATLLIKGP AYG+LKGE GVHRLVR
Sbjct: 123 WAEMLLRMYTRWANDKGFEVEILDYLEGEEAGIKSATLLIKGPFAYGYLKGEAGVHRLVR 182

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+D+  RRHTSF+ + V P ++D IEIEI   D +IDT+RASGAGGQHVN T+SAVRI
Sbjct: 183 ISPFDAAGRRHTSFALVEVIPELEDDIEIEIRPEDLKIDTFRASGAGGQHVNKTESAVRI 242

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH+PTG+VV CQ ERSQ +N+  A  ML+AKL +L +++R+E     +    E  WG QI
Sbjct: 243 THLPTGIVVSCQNERSQIQNRETAMKMLKAKLLDLMMKERKEKIEDLKGEHREAAWGNQI 302

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           RSYV QPY +VKD RTN E+ + + V+DG++D F+ A L  K
Sbjct: 303 RSYVFQPYTLVKDHRTNYEEGNVNAVMDGEIDGFINAYLKQK 344


>gi|224499863|ref|ZP_03668212.1| peptide chain release factor 2 [Listeria monocytogenes Finland
           1988]
 gi|284802947|ref|YP_003414812.1| peptide chain release factor 2 [Listeria monocytogenes 08-5578]
 gi|284996088|ref|YP_003417856.1| peptide chain release factor 2 [Listeria monocytogenes 08-5923]
 gi|284058509|gb|ADB69450.1| peptide chain release factor 2 [Listeria monocytogenes 08-5578]
 gi|284061555|gb|ADB72494.1| peptide chain release factor 2 [Listeria monocytogenes 08-5923]
          Length = 338

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 170/336 (50%), Positives = 221/336 (65%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              R++ L  +  DP+ W +   A+ ++ E             +++      I LEL  E
Sbjct: 1   MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D  + +E   +++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLL
Sbjct: 61  EADEDLQEELEKDIKAYMATISAFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLL 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS
Sbjct: 121 RMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDS 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           + RRHTSF S+ V P +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G
Sbjct: 181 SGRRHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSG 240

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV CQ ERSQ KN+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  
Sbjct: 241 IVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFH 300

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN E  +   V+DGDLDDF+ A L  +
Sbjct: 301 PYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 336


>gi|121602405|ref|YP_989094.1| peptide chain release factor 2 [Bartonella bacilliformis KC583]
 gi|120614582|gb|ABM45183.1| peptide chain release factor 2 [Bartonella bacilliformis KC583]
          Length = 376

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 227/353 (64%), Positives = 283/353 (80%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ + L  L    DWD +++RL +LN K EDP LW N  +A+ +MRERQ L+++I+ I+ 
Sbjct: 11  EIQQALQLLRRHLDWDQSLKRLEYLNQKAEDPSLWDNAQQAQDMMRERQSLEDSINSIEL 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              +L +++ L+ +  EE D  ++ +  + ++ +K E++ +Q + LLSGEADSND YLE+
Sbjct: 71  FTQKLEESIELIAMGEEERDVDVIADAENTIRELKNEIDKRQIDILLSGEADSNDTYLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTESQDWA MLLRMY RW E+ K K E LEI+DGEEAGIKSAT+LIKG NAYG +
Sbjct: 131 HAGAGGTESQDWAAMLLRMYIRWVEQHKMKVEVLEINDGEEAGIKSATILIKGHNAYGMI 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYDSN+RRHTSF+S+WVYPVVDD+I++++SESD RIDTYRASGAGGQ
Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFASVWVYPVVDDNIKVDVSESDVRIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+LYE EL+KREE  N  E+
Sbjct: 251 HVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLYEEELKKREEETNAVEA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           SKTEIGWG QIRSYVLQPYQ+VKDLRT IE T P  VL+GDLD F++A LA +
Sbjct: 311 SKTEIGWGHQIRSYVLQPYQLVKDLRTGIENTDPQSVLNGDLDRFIEAALAQR 363


>gi|118594576|ref|ZP_01551923.1| Peptide chain release factor 2 [Methylophilales bacterium HTCC2181]
 gi|118440354|gb|EAV46981.1| Peptide chain release factor 2 [Methylophilales bacterium HTCC2181]
          Length = 355

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 173/353 (49%), Positives = 244/353 (69%), Gaps = 1/353 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           ++ ++ L   GG FD +   + +  L+ + EDP  W +   ++ + +E++ L++ +    
Sbjct: 2   LESTKNLIPCGGFFDLEEKKRTIKLLSIQQEDPKTWSDRALSQKIGKEKKVLEDIVHQAD 61

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            +   L DN  L ++A+EE+D + L     + ++++  V+  +F+ + S   D N+ +++
Sbjct: 62  SLISDLADNQELFDMAVEENDLNTLTTIKSDTEKLEKSVDDIEFKRMFSHPMDPNNCFVD 121

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
             +G+GGTE+QDWANML RMYTR+AE++ FK E LE  +GE AGIK ATL I G  A+G+
Sbjct: 122 FQSGSGGTEAQDWANMLFRMYTRYAERKNFKIEVLEYTEGEVAGIKGATLKIIGDYAFGF 181

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E G+HRLVR SP+DS SRRHTSF+ + VYP +D+SI+I+I+ SD RIDTYRASGAGG
Sbjct: 182 LRTESGIHRLVRKSPFDSGSRRHTSFAGVNVYPEIDESIDIDINPSDLRIDTYRASGAGG 241

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QH+N TDSAVRITH+PT  VVQCQ +RSQH+NKAQA NML+A+LY +EL KR E     E
Sbjct: 242 QHINKTDSAVRITHVPTNTVVQCQNDRSQHRNKAQAMNMLKAQLYAIELSKRNEEKQAME 301

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            +KT+IGWG QIRSYVL     +KDLRTN+E  +   VLDGDLD F+  +L  
Sbjct: 302 DAKTDIGWGHQIRSYVLD-QSRIKDLRTNLEVGNTQGVLDGDLDMFISESLKQ 353


>gi|108804456|ref|YP_644393.1| peptide chain release factor 2 [Rubrobacter xylanophilus DSM 9941]
 gi|108765699|gb|ABG04581.1| bacterial peptide chain release factor 2 (bRF-2) [Rubrobacter
           xylanophilus DSM 9941]
          Length = 366

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 178/352 (50%), Positives = 236/352 (67%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS++L+ L   FD     +R + L+ +   P  W +   AK +  E    ++ +  ++E+
Sbjct: 11  LSQRLDELEAFFDVGRLRERAARLSEEMSRPGFWDDPDRAKGVAAEFSRTEDRLKLMEEL 70

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D+  LLELA  + +     E       I+  +E ++   L +GE D  DA L ++
Sbjct: 71  RGRLEDSSELLELAEGDRELLEEVERELEG--IERRIEEQEVARLFTGEYDEGDAILTIN 128

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG +SQDWA ML RMY RWAE+R F  E +E  +GEEAGIKSAT  + GP A+G L 
Sbjct: 129 SGAGGVDSQDWAEMLARMYRRWAERRGFGLEVIEYTEGEEAGIKSATFSVSGPYAFGLLS 188

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+D++SRRHTSF+S+ V P +DD++E+EI E D ++DTYRASGAGGQH
Sbjct: 189 AERGVHRLVRISPFDASSRRHTSFASVAVAPAIDDAVEVEIDEKDLKVDTYRASGAGGQH 248

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVRITH+PTG+VVQCQ ERSQH+N+  A  +L+A+L+ELE +KRE+        
Sbjct: 249 VNKTDSAVRITHLPTGIVVQCQNERSQHQNRETALRVLKARLFELEREKREQEIAAQSGE 308

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K EIGWG QIRSYVL PY+MVKDLRT  E      VLDGDLD F+ A L  +
Sbjct: 309 KAEIGWGSQIRSYVLHPYRMVKDLRTGEETGDVDRVLDGDLDRFIYAYLKRR 360


>gi|281185482|sp|Q0TNE1|RF2_CLOP1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|255529900|gb|ABG84933.2| peptide chain release factor 2, programmed frameshift [Clostridium
           perfringens ATCC 13124]
          Length = 362

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 156/350 (44%), Positives = 228/350 (65%), Gaps = 1/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +G      +  ++ + L  K ++   W +V +A+ + +E + + + I   K 
Sbjct: 12  ELKNNLKEMGASLCLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKN 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +R+ D  +L EL  E D+ +  +     ++ +  E++  + E++LSGE D NDA L +
Sbjct: 72  LNERIDDVEVLKELMEENDEETAKE-IISEVKALSKEIDTLKIETILSGEYDRNDAILTL 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H G GG+++ DW  MLLRMYTRW EK+ +  E ++   G+EAG+KS TL +KG  AYG+L
Sbjct: 131 HTGVGGSDANDWTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+G+HRLVRISP+++N +R TSF+S+ V P +    +IEI+  D RIDTYRA GAGGQ
Sbjct: 191 KAEKGIHRLVRISPFNANGKRQTSFASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+VVQCQ ERSQ  N+  A  ML++KL EL+ +  +E       
Sbjct: 251 HVNKTESAVRITHIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              ++GWG QIRSYV  PY MVKD RTN+E ++ + V+DGD+D+F+ A L
Sbjct: 311 ELKDMGWGSQIRSYVFHPYSMVKDHRTNVETSNVNGVMDGDIDNFIIAYL 360


>gi|271962992|ref|YP_003337188.1| peptide chain release factor 2 [Streptosporangium roseum DSM 43021]
 gi|270506167|gb|ACZ84445.1| peptide chain release factor 2 [Streptosporangium roseum DSM 43021]
          Length = 372

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 161/354 (45%), Positives = 226/354 (63%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+  LN +  + D D   ++L  L  +   P LW +   A+ +  +  +L   ++ ++ 
Sbjct: 12  ELTGTLNSIQDVLDLDAIRKQLEELGEQAAAPDLWNDQEHAQKVTSKLSYLQGEVNRVES 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  RL D  +L ELA  EDD    +E    L  +K ++   +  +LLSGE D+ +A + +
Sbjct: 72  LGQRLEDLTVLYELAAAEDDEETREEADRELASLKSDIGALEVRTLLSGEYDAREAVVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++ AGG ++ DWA MLLRMY RWAE++ + TE  E    EEAGIKSAT  +K P AYG L
Sbjct: 132 NSQAGGVDAADWAQMLLRMYIRWAERKGYPTEVYETSYAEEAGIKSATFTVKAPYAYGTL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           +GE G HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I+E D R+D YR+SG GGQ
Sbjct: 192 RGEHGTHRLVRISPFDNQGRRQTSFAGVDVVPVVETTDHIDINEDDLRVDVYRSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L++KL E + Q+     N    
Sbjct: 252 GVNTTDSAVRLTHLPTGIVVSCQNERSQLQNKATAMAVLQSKLLERKRQEEAAALNEIRG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             T   WG QIR+YVL PYQ+VKDLRT  E  +PS VLDGDLD+F+++ +   +
Sbjct: 312 EAT-TSWGTQIRNYVLHPYQIVKDLRTGTEAGNPSSVLDGDLDEFIESEIRWTR 364


>gi|308175261|ref|YP_003921966.1| peptide chain release factor 2 [Bacillus amyloliquefaciens DSM 7]
 gi|307608125|emb|CBI44496.1| peptide chain release factor 2 [Bacillus amyloliquefaciens DSM 7]
 gi|328555234|gb|AEB25726.1| peptide chain release factor 2 [Bacillus amyloliquefaciens TA208]
 gi|328913595|gb|AEB65191.1| peptide chain release factor 2 [Bacillus amyloliquefaciens LL3]
          Length = 327

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 168/325 (51%), Positives = 219/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W +  +A+ ++ E   L + ++   ++ +   +  +  EL  EE D  + QE  
Sbjct: 1   MAEPEFWNDQQKAQTVINEANGLKDYVNSYHQLSESHEELQMTYELLKEEPDQELQQELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L+ +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+R 
Sbjct: 61  KELKSLTKELNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
            K E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 CKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  ++ I+IEI   D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ
Sbjct: 181 EVMPEFNEEIDIEIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A  ML+AKLY+  +++++   +     + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 IKNRDRAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGD+D F+ A L  K
Sbjct: 301 TEMGNVQAVMDGDIDIFIDAYLRSK 325


>gi|315652552|ref|ZP_07905533.1| peptide chain release factor RF2 [Eubacterium saburreum DSM 3986]
 gi|315485181|gb|EFU75582.1| peptide chain release factor RF2 [Eubacterium saburreum DSM 3986]
          Length = 351

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 157/338 (46%), Positives = 229/338 (67%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D+  +++  L+   E+P  W +  E+  ++RE + L + +    +++    D  +L+E+ 
Sbjct: 2   DSKEKKIIELDRAMEEPSFWDDPKESTKIVREAKQLKDTVEKYNKLKSEYEDIGVLIEMG 61

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
            EE+D S++ E    L+    E++  +  +LL+GE DS++A ++++AGAGGTES DW +M
Sbjct: 62  YEENDESLIPEIEAMLEEFTKEIDALKIATLLTGEYDSSNAIMKLNAGAGGTESCDWCSM 121

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMYTRWA K  +  + L+I +G+EAGIKS TL I G NAYG+L+ E GVHRLVRISP+
Sbjct: 122 LYRMYTRWAAKEGYTVDVLDILEGDEAGIKSVTLQINGLNAYGYLRSEHGVHRLVRISPF 181

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           ++  +R TSF S  + P +++ ++++I+  D RIDTYR+SGAGGQH+N T SA+RITHIP
Sbjct: 182 NAAGKRQTSFVSCDIMPDIEEDLDVDINPDDLRIDTYRSSGAGGQHINKTSSAIRITHIP 241

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316
           TGVVVQCQ ERSQ +NK +A  ML+AKL+ L+ Q   E  +       +IGWG QIRSYV
Sbjct: 242 TGVVVQCQNERSQFQNKDKAMQMLKAKLFLLKQQANVEKLSDIRGDVKDIGWGNQIRSYV 301

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +QPY MVKD RT  E  + + V+DGD+D F+ A L  +
Sbjct: 302 MQPYTMVKDHRTGAESGNVTAVMDGDIDKFIIAYLTWQ 339


>gi|255264706|ref|ZP_05344048.1| peptide chain release factor 2 [Thalassiobium sp. R2A62]
 gi|255107041|gb|EET49715.1| peptide chain release factor 2 [Thalassiobium sp. R2A62]
          Length = 375

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 195/351 (55%), Positives = 244/351 (69%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  L    D++ A  RL   N + EDP LW +   A+ LMR+RQ L +AI   + I
Sbjct: 12  IEKSLVLLAQRLDYETAPYRLEEFNARVEDPTLWDDPEAAQKLMRDRQALVDAIKTYETI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN+ L+EL   EDD  ++ E    L  +K     K+ E+LL GEAD+ND +LE++
Sbjct: 72  SQELADNVELIELGEMEDDADVVTEAETALATLKDAAAQKELEALLDGEADANDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML RMY RWAEK  +K E      G+EAGIKSA+  I G NAYGWLK
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKAGYKVELQSESAGDEAGIKSASYKISGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ +D RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPADIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL KR  + N    +
Sbjct: 252 VNTTDSAVRITHAPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQIELDKRSALVNEAHEN 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             + GWG QIRSYVLQPYQMVKDLRT+ E +    VLDGDLD  M ATLA 
Sbjct: 311 AGDAGWGNQIRSYVLQPYQMVKDLRTSFETSDTKGVLDGDLDGLMAATLAQ 361


>gi|326790220|ref|YP_004308041.1| peptide chain release factor 2 [Clostridium lentocellum DSM 5427]
 gi|326540984|gb|ADZ82843.1| peptide chain release factor 2 [Clostridium lentocellum DSM 5427]
          Length = 369

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 166/350 (47%), Positives = 228/350 (65%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +L  +G   D +    + S L   + D   W ++  A+ ++++ ++  + I    ++ 
Sbjct: 15  KAKLVEMGNRLDIEGCKVKASELEEMSMDNAFWNDIERAQSVLQQLKNYKDRIEKYDKLC 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
               D L+L+E+A E++D  + +E     +  + +       +LL  E D N+A LE+H 
Sbjct: 75  GSFEDILVLIEMANEDEDIGLAEEAKACAKTFEEDYSEMLTATLLDQEYDRNNAILELHP 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+ DW  ML RMYTRWA+++ FK E L+  DG+EAGIKS T+ I G NAYG+LK 
Sbjct: 135 GAGGTEACDWVAMLFRMYTRWADRKGFKVEVLDYLDGDEAGIKSVTIQISGENAYGYLKS 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+G+HRLVRISP+DS+ RRHTSF+S  V P + D IEI+I   D RIDTYR++GAGGQHV
Sbjct: 195 EKGIHRLVRISPFDSSGRRHTSFASCDVIPEITDEIEIDIRPEDLRIDTYRSTGAGGQHV 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVRITH+PT +VVQCQ ERSQ +N+ +A  ML+AKLYE E ++R +  +     K
Sbjct: 255 NTTDSAVRITHLPTNIVVQCQNERSQIQNRERAMQMLKAKLYEKEQEERMDRIDGIRGEK 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            +I WG QIRSYV  PY MVKD RT+ E  + S V+DGD+D FM A L  
Sbjct: 315 KDIAWGSQIRSYVFHPYNMVKDHRTSEETGNTSAVMDGDIDRFMNAYLGW 364


>gi|257082363|ref|ZP_05576724.1| peptide chain release factor 2 [Enterococcus faecalis E1Sol]
 gi|256990393|gb|EEU77695.1| peptide chain release factor 2 [Enterococcus faecalis E1Sol]
          Length = 327

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 170/325 (52%), Positives = 219/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N+  A+ L+ E   L        ++ + L +  ++ EL  EE D  I +E  
Sbjct: 1   MGEPGFWDNIETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  ++  +   +   LL+   D N+A +E+H GAGGTESQDW +MLLRMYTRWAE   
Sbjct: 61  ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+ E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+
Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEI I+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ
Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA +ML+AKLY+LE++K+ + A      + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  +
Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325


>gi|256842745|ref|ZP_05548233.1| peptide chain release factor 2 [Lactobacillus crispatus 125-2-CHN]
 gi|256614165|gb|EEU19366.1| peptide chain release factor 2 [Lactobacillus crispatus 125-2-CHN]
          Length = 354

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 160/345 (46%), Positives = 211/345 (61%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LGGLFD D   + +     K   P  W N  +A+ L+ E   L        ++Q    D
Sbjct: 2   TLGGLFDLDAIDESIEINENKMAQPDFWNNQEKAQKLISETNRLKEKRDSFLKLQTSYED 61

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
               +EL  EE D  + +E   +L  ++ +    + + LLSG+ DS++A +E+H GAGGT
Sbjct: 62  ETTAVELLREEPDPDLQKEVEADLATLQEDFHNYELDLLLSGKYDSHNALMEIHPGAGGT 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+ DW  MLLRMY R+ +   FK E  +   GEEAG+KS +  I G NAYG LK E GVH
Sbjct: 122 EAMDWGQMLLRMYQRYCDTAGFKFEINDYEPGEEAGLKSVSARIVGKNAYGMLKSENGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVRISP+D+  RRHTSF+S+ V P VDDSI+I+I   D R+D YR+SGAGGQH+N T S
Sbjct: 182 RLVRISPFDAAKRRHTSFASVEVIPEVDDSIQIDIDPKDLRVDVYRSSGAGGQHINKTSS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+V   Q +RSQ +N+  A N LRAKL+ LE +K+ +     +  + EIGW
Sbjct: 242 AVRITHLPTGIVTTSQAQRSQLQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGW 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           G QIRSYV  PY +VKDLRT  E      V+DG L  F+ + L  
Sbjct: 302 GSQIRSYVFHPYNLVKDLRTGHETADAQGVMDGKLQPFIYSYLQW 346


>gi|157693929|ref|YP_001488391.1| peptide chain release factor RF2 [Bacillus pumilus SAFR-032]
 gi|157682687|gb|ABV63831.1| peptide chain release factor RF2 [Bacillus pumilus SAFR-032]
          Length = 327

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 164/325 (50%), Positives = 217/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +   W +  +A+ ++ E   L + ++   E+ +   +  +  +L  E+ D  +  E  
Sbjct: 1   MSEADFWNDQQKAQGVINEANALKDNVNAYHELSESHEELQMTHDLLKEDYDEELHVELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L+ +  +    + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAE+R 
Sbjct: 61  KELKNLTKQFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  ++ I+I+I   D ++DTYRASGAGGQHVNTTDSAVRITHIPT VVV CQ ERSQ
Sbjct: 181 DVMPEFNEEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHIPTNVVVTCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A  ML++KLY+  +++++   +     + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNRERAMKMLKSKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  K
Sbjct: 301 TEMGNVQAVMDGDLDSFIDAYLRSK 325


>gi|226225057|ref|YP_002759164.1| peptide chain release factor 2 [Listeria monocytogenes Clip81459]
 gi|258611946|ref|ZP_05243310.2| peptide chain release factor 2 [Listeria monocytogenes FSL R2-503]
 gi|293596308|ref|ZP_05230370.2| peptide chain release factor 2 [Listeria monocytogenes FSL J1-194]
 gi|293596920|ref|ZP_05265609.2| peptide chain release factor 2 [Listeria monocytogenes HPB2262]
 gi|300764992|ref|ZP_07074980.1| peptide chain release factor 2 [Listeria monocytogenes FSL N1-017]
 gi|225877519|emb|CAS06233.1| Putative peptide chain release factor 2 [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
 gi|258607352|gb|EEW19960.1| peptide chain release factor 2 [Listeria monocytogenes FSL R2-503]
 gi|293583807|gb|EFF95839.1| peptide chain release factor 2 [Listeria monocytogenes HPB2262]
 gi|293594612|gb|EFG02373.1| peptide chain release factor 2 [Listeria monocytogenes FSL J1-194]
 gi|300514292|gb|EFK41351.1| peptide chain release factor 2 [Listeria monocytogenes FSL N1-017]
 gi|332312939|gb|EGJ26034.1| Peptide chain release factor 2 [Listeria monocytogenes str. Scott
           A]
          Length = 338

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 169/336 (50%), Positives = 221/336 (65%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              R++ L  +  DP+ W +   A+ ++ E             +++      I LEL  E
Sbjct: 1   MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D  + +E   +++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLL
Sbjct: 61  EADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLL 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS
Sbjct: 121 RMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDS 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           + RRHTSF S+ V P +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G
Sbjct: 181 SGRRHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSG 240

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV CQ ERSQ KN+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  
Sbjct: 241 IVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFH 300

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN E  +   V+DGDLD+F+ A L  +
Sbjct: 301 PYSMVKDHRTNYETGNIQAVMDGDLDEFINAYLRSR 336


>gi|290892673|ref|ZP_06555665.1| peptide chain release factor 2 [Listeria monocytogenes FSL J2-071]
 gi|290557733|gb|EFD91255.1| peptide chain release factor 2 [Listeria monocytogenes FSL J2-071]
 gi|307572036|emb|CAR85215.1| peptide chain release factor 2 [Listeria monocytogenes L99]
          Length = 338

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 170/336 (50%), Positives = 221/336 (65%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              R++ L  +  DP+ W +   A+ ++ E             +++      I LEL  E
Sbjct: 1   MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D  + +E   +++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLL
Sbjct: 61  EADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLL 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS
Sbjct: 121 RMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDS 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           + RRHTSF S+ V P +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G
Sbjct: 181 SGRRHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSG 240

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV CQ ERSQ KN+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  
Sbjct: 241 IVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFH 300

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN E  +   V+DGDLDDF+ A L  +
Sbjct: 301 PYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 336


>gi|256762748|ref|ZP_05503328.1| peptide chain release factor 2 [Enterococcus faecalis T3]
 gi|257079206|ref|ZP_05573567.1| peptide chain release factor 2 [Enterococcus faecalis JH1]
 gi|294779419|ref|ZP_06744820.1| peptide chain release factor 2 [Enterococcus faecalis PC1.1]
 gi|307269575|ref|ZP_07550914.1| peptide chain release factor 2 [Enterococcus faecalis TX4248]
 gi|307289302|ref|ZP_07569258.1| peptide chain release factor 2 [Enterococcus faecalis TX0109]
 gi|256683999|gb|EEU23694.1| peptide chain release factor 2 [Enterococcus faecalis T3]
 gi|256987236|gb|EEU74538.1| peptide chain release factor 2 [Enterococcus faecalis JH1]
 gi|294453548|gb|EFG21949.1| peptide chain release factor 2 [Enterococcus faecalis PC1.1]
 gi|306500011|gb|EFM69372.1| peptide chain release factor 2 [Enterococcus faecalis TX0109]
 gi|306514195|gb|EFM82771.1| peptide chain release factor 2 [Enterococcus faecalis TX4248]
 gi|315147459|gb|EFT91475.1| peptide chain release factor 2 [Enterococcus faecalis TX4244]
 gi|315163916|gb|EFU07933.1| peptide chain release factor 2 [Enterococcus faecalis TX1302]
          Length = 327

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 170/325 (52%), Positives = 218/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N   A+ L+ E   L        ++ + L +  ++ EL  EE D  I +E  
Sbjct: 1   MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDTEIQEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  ++  +   +   LL+   D N+A +E+H GAGGTESQDW +MLLRMYTRWAE   
Sbjct: 61  ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+ E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+
Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEI I+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ
Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA +ML+AKLY+LE++K+ + A      + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  +
Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325


>gi|312901832|ref|ZP_07761097.1| peptide chain release factor 2 [Enterococcus faecalis TX0470]
 gi|311291025|gb|EFQ69581.1| peptide chain release factor 2 [Enterococcus faecalis TX0470]
          Length = 327

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 170/325 (52%), Positives = 218/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N   A+ L+ E   L        ++ + L +  ++ EL  EE D  I +E  
Sbjct: 1   MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  ++  +   +   LL+   D N+A +E+H GAGGTESQDW +MLLRMYTRWAE   
Sbjct: 61  ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+ E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+
Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEI I+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ
Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQVQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA +ML+AKLY+LE++K+ + A      + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  +
Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325


>gi|240143320|ref|ZP_04741921.1| peptide chain release factor 2 [Roseburia intestinalis L1-82]
 gi|257204691|gb|EEV02976.1| peptide chain release factor 2 [Roseburia intestinalis L1-82]
 gi|291536819|emb|CBL09931.1| bacterial peptide chain release factor 2 (bRF-2) [Roseburia
           intestinalis M50/1]
 gi|291539122|emb|CBL12233.1| bacterial peptide chain release factor 2 (bRF-2) [Roseburia
           intestinalis XB6B4]
          Length = 338

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 161/324 (49%), Positives = 217/324 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P+ W + + ++  M+E + + + ++    ++    D   L+E+  EE+D S++ E  
Sbjct: 1   MEAPNFWDDPVVSQKKMKELKSMKDDVATYASLKTEFEDIETLIEMGYEENDASLIPEIQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L       E  + ++LLSGE DS+ A + +HAGAGGTES DWA ML RMYTRWA  + 
Sbjct: 61  EMLDEFTKTYEGIRIKTLLSGEYDSDGAIVSLHAGAGGTESCDWAAMLYRMYTRWASDKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L+  DGEEAGIKS T  I G NAYG++K E+GVHRLVRISP+++  +R TSF S 
Sbjct: 121 FSVEVLDSLDGEEAGIKSITFQINGENAYGYMKSEKGVHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ +++EI+E D RIDTYR+SGAGGQH+N T SA+RITHIPTG+VVQCQ ERSQ
Sbjct: 181 DVMPDIEEDLDVEINEDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK +A  ML+AKLY L+ Q+  E A       TEIGWG QIRSYV+QPY MVKD RT 
Sbjct: 241 FQNKDKAMQMLKAKLYLLKQQENAEKAADIRGEVTEIGWGNQIRSYVMQPYTMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
           +E  +   V+DG +D F+   L  
Sbjct: 301 VETGNVDSVMDGKIDIFINGYLKW 324


>gi|296268776|ref|YP_003651408.1| peptide chain release factor 2 [Thermobispora bispora DSM 43833]
 gi|296091563|gb|ADG87515.1| peptide chain release factor 2 [Thermobispora bispora DSM 43833]
          Length = 378

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 164/352 (46%), Positives = 227/352 (64%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+  L  +  + D D   ++++ L  +   P LW +  +A+ +     HL   ++ I+E
Sbjct: 12  ELTGTLRGIQDVLDIDGLRKQIAELEEQAAAPDLWNDPEKAQRVTSRLSHLQGEVNRIEE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  RL D  +L ELA EE D   L E    L ++K ++   +  +LLSGE D  +A + +
Sbjct: 72  LARRLEDLPVLFELAAEEGDQEALAEAERELAKLKSDIGALEVRTLLSGEYDEREALITI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +A AGG ++ DWA MLLRMY RWAE++ + TE  +    EEAGIKS T  +K P AYG L
Sbjct: 132 NAQAGGVDAADWAQMLLRMYLRWAERKGYPTEIYDTSYAEEAGIKSVTFTVKAPYAYGTL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE G HRLVRISP+D+ +RR TSF+ + V PVV+ + +IEI+E + RID YR+SG GGQ
Sbjct: 192 KGEHGTHRLVRISPFDNQARRQTSFAGVDVMPVVEQTDDIEINEDEIRIDVYRSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTG+VV CQ ERSQ +N+A A  +L+AKL E + Q+  +       
Sbjct: 252 GVNTTDSAVRITHLPTGIVVSCQNERSQLQNRATAMAVLKAKLLERKRQEEAQAMAELRG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             T   WG QIR+YVL PYQ+VKDLRT +E  +P+ VLDGDLD F++A +  
Sbjct: 312 E-TTTSWGTQIRNYVLHPYQIVKDLRTGVESGNPTAVLDGDLDQFIEAEIRW 362


>gi|229545626|ref|ZP_04434351.1| peptide chain release factor RF2 [Enterococcus faecalis TX1322]
 gi|229549816|ref|ZP_04438541.1| peptide chain release factor RF2 [Enterococcus faecalis ATCC 29200]
 gi|255972544|ref|ZP_05423130.1| peptide chain release factor 2 [Enterococcus faecalis T1]
 gi|255975657|ref|ZP_05426243.1| peptide chain release factor 2 [Enterococcus faecalis T2]
 gi|256619256|ref|ZP_05476102.1| peptide chain release factor 2 [Enterococcus faecalis ATCC 4200]
 gi|256853316|ref|ZP_05558686.1| peptide chain release factor 2 [Enterococcus faecalis T8]
 gi|256959169|ref|ZP_05563340.1| peptide chain release factor 2 [Enterococcus faecalis DS5]
 gi|256964932|ref|ZP_05569103.1| peptide chain release factor 2 [Enterococcus faecalis HIP11704]
 gi|257084989|ref|ZP_05579350.1| peptide chain release factor 2 [Enterococcus faecalis Fly1]
 gi|257087047|ref|ZP_05581408.1| peptide chain release factor 2 [Enterococcus faecalis D6]
 gi|257419489|ref|ZP_05596483.1| peptide chain release factor [Enterococcus faecalis T11]
 gi|257422371|ref|ZP_05599361.1| peptide chain release factor [Enterococcus faecalis X98]
 gi|307273028|ref|ZP_07554274.1| peptide chain release factor 2 [Enterococcus faecalis TX0855]
 gi|307275776|ref|ZP_07556915.1| peptide chain release factor 2 [Enterococcus faecalis TX2134]
 gi|307277873|ref|ZP_07558957.1| peptide chain release factor 2 [Enterococcus faecalis TX0860]
 gi|307291799|ref|ZP_07571670.1| peptide chain release factor 2 [Enterococcus faecalis TX0411]
 gi|312951693|ref|ZP_07770588.1| peptide chain release factor 2 [Enterococcus faecalis TX0102]
 gi|229305085|gb|EEN71081.1| peptide chain release factor RF2 [Enterococcus faecalis ATCC 29200]
 gi|229309284|gb|EEN75271.1| peptide chain release factor RF2 [Enterococcus faecalis TX1322]
 gi|255963562|gb|EET96038.1| peptide chain release factor 2 [Enterococcus faecalis T1]
 gi|255968529|gb|EET99151.1| peptide chain release factor 2 [Enterococcus faecalis T2]
 gi|256598783|gb|EEU17959.1| peptide chain release factor 2 [Enterococcus faecalis ATCC 4200]
 gi|256711775|gb|EEU26813.1| peptide chain release factor 2 [Enterococcus faecalis T8]
 gi|256949665|gb|EEU66297.1| peptide chain release factor 2 [Enterococcus faecalis DS5]
 gi|256955428|gb|EEU72060.1| peptide chain release factor 2 [Enterococcus faecalis HIP11704]
 gi|256993019|gb|EEU80321.1| peptide chain release factor 2 [Enterococcus faecalis Fly1]
 gi|256995077|gb|EEU82379.1| peptide chain release factor 2 [Enterococcus faecalis D6]
 gi|257161317|gb|EEU91277.1| peptide chain release factor [Enterococcus faecalis T11]
 gi|257164195|gb|EEU94155.1| peptide chain release factor [Enterococcus faecalis X98]
 gi|306497065|gb|EFM66611.1| peptide chain release factor 2 [Enterococcus faecalis TX0411]
 gi|306505270|gb|EFM74456.1| peptide chain release factor 2 [Enterococcus faecalis TX0860]
 gi|306507468|gb|EFM76599.1| peptide chain release factor 2 [Enterococcus faecalis TX2134]
 gi|306510013|gb|EFM79037.1| peptide chain release factor 2 [Enterococcus faecalis TX0855]
 gi|310630410|gb|EFQ13693.1| peptide chain release factor 2 [Enterococcus faecalis TX0102]
 gi|315027919|gb|EFT39851.1| peptide chain release factor 2 [Enterococcus faecalis TX2137]
 gi|315029504|gb|EFT41436.1| peptide chain release factor 2 [Enterococcus faecalis TX4000]
 gi|315031977|gb|EFT43909.1| peptide chain release factor 2 [Enterococcus faecalis TX0017]
 gi|315037173|gb|EFT49105.1| peptide chain release factor 2 [Enterococcus faecalis TX0027]
 gi|315145002|gb|EFT89018.1| peptide chain release factor 2 [Enterococcus faecalis TX2141]
 gi|315152286|gb|EFT96302.1| peptide chain release factor 2 [Enterococcus faecalis TX0031]
 gi|315156087|gb|EFU00104.1| peptide chain release factor 2 [Enterococcus faecalis TX0043]
 gi|315158272|gb|EFU02289.1| peptide chain release factor 2 [Enterococcus faecalis TX0312]
 gi|315167276|gb|EFU11293.1| peptide chain release factor 2 [Enterococcus faecalis TX1341]
 gi|315169439|gb|EFU13456.1| peptide chain release factor 2 [Enterococcus faecalis TX1342]
 gi|315174820|gb|EFU18837.1| peptide chain release factor 2 [Enterococcus faecalis TX1346]
 gi|323480920|gb|ADX80359.1| peptide chain release factor 2 [Enterococcus faecalis 62]
 gi|327535327|gb|AEA94161.1| peptide chain release factor RF2 [Enterococcus faecalis OG1RF]
          Length = 327

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 170/325 (52%), Positives = 218/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N   A+ L+ E   L        ++ + L +  ++ EL  EE D  I +E  
Sbjct: 1   MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  ++  +   +   LL+   D N+A +E+H GAGGTESQDW +MLLRMYTRWAE   
Sbjct: 61  ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+ E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+
Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEI I+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ
Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA +ML+AKLY+LE++K+ + A      + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  +
Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325


>gi|71908457|ref|YP_286044.1| peptide chain release factor 2 [Dechloromonas aromatica RCB]
 gi|71848078|gb|AAZ47574.1| bacterial peptide chain release factor 2 (bRF-2) [Dechloromonas
           aromatica RCB]
          Length = 325

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 163/324 (50%), Positives = 227/324 (70%), Gaps = 1/324 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            EDP +W +   A+ L RE++ L+N +  ++E+Q  L D   L ++  E+ D   L    
Sbjct: 1   MEDPKIWDDAKRAQELGREKKSLENIVLVLEEVQSGLNDGRELFDMGKEDGDEDTLLSVE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +   ++ +V   +F  + +  +D    +LE+ AGAGGTE+QDWA+MLLRMY ++ EK+ 
Sbjct: 61  ADNAELEKKVAALEFRRMFNNPSDPMPCFLEIQAGAGGTEAQDWASMLLRMYLKYGEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E +E  +G+ AG+KSAT+   G  AYG L+ E G+HRLVR SP+DSN+RRHTSF+S+
Sbjct: 121 FTVEVMEESEGDVAGLKSATVKFTGDYAYGTLRTETGIHRLVRKSPFDSNARRHTSFTSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           +V+P VDDSIEI I+ +D R DTYRASGAGGQH+N TDSAVR+TH+PTG+VVQCQ +RSQ
Sbjct: 181 FVFPEVDDSIEININPADVRTDTYRASGAGGQHINKTDSAVRLTHVPTGIVVQCQNDRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H+N+ +AW MLRA++YE EL+K++      E +K++IGWG QIRSYVL     +KDLRTN
Sbjct: 241 HRNRDEAWQMLRARIYEFELRKQQAEQQKLEDAKSDIGWGHQIRSYVLD-QSRIKDLRTN 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  +   VLDGDLD F++A+L  
Sbjct: 300 HETGNTQAVLDGDLDPFIEASLKQ 323


>gi|261417352|ref|YP_003251035.1| hypothetical protein Fisuc_2973 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373808|gb|ACX76553.1| hypothetical protein Fisuc_2973 [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 368

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 144/351 (41%), Positives = 224/351 (63%), Gaps = 1/351 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           ++L  +++ L G  D +   + L  L   + DP+LW +  +A+ +M++  +L   I   K
Sbjct: 11  IELRSRIDKLWGYLDLEAKTEELYVLEKDSGDPNLWNDQEKAQSMMKKIGNLKGLIDSWK 70

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           E+     D   L E++ +E+   +      ++  +K  VE  +F+ +L+G  D+    + 
Sbjct: 71  EVSQTCDDLAELYEMSKDEESADLTATLESDIADLKSRVEAMEFKKMLNGPDDACACLMS 130

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +H GAGGTESQDWA ML RMYT + E+ K   + ++  + E+AG+KSAT+ +   NAYG 
Sbjct: 131 IHPGAGGTESQDWALMLFRMYTHFFEREKMDFKVVDFQEAEDAGLKSATIEVSCENAYGL 190

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E GVHRLVRISP+D+N+RRHTSF+++++YP   + +E ++  S+ R+DTYR+SGAGG
Sbjct: 191 LRSEIGVHRLVRISPFDANARRHTSFTAVYLYP-EHEDVEFDLDMSEVRVDTYRSSGAGG 249

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q++N TDSAVR+TH+PTG++  CQ ERSQ +N+   + ML+  + E    + E   +   
Sbjct: 250 QYINKTDSAVRMTHLPTGIMASCQTERSQIQNRETCYKMLKTMVAEHYRLEEEAKRDARM 309

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + K ++ WG QIRSYVLQPYQ+VKDLRT +E +  + VLDG +  F+ A L
Sbjct: 310 AEKKKVEWGSQIRSYVLQPYQLVKDLRTGVETSDTAGVLDGKIKPFIDAYL 360


>gi|319650621|ref|ZP_08004761.1| peptide chain release factor 2 [Bacillus sp. 2_A_57_CT2]
 gi|317397802|gb|EFV78500.1| peptide chain release factor 2 [Bacillus sp. 2_A_57_CT2]
          Length = 331

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 168/325 (51%), Positives = 216/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +   A++++ E   L   +    ++ +   +  +  EL  EE D  +  +  
Sbjct: 1   MLQPGFWDDQQAAQVVISESNSLKEQVVEFHDLYETFENLELTYELVKEESDAELQADLE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L+ +   +   + + LLS E D N+A LE+H GAGGTESQDW +MLLRMYTRWAEK+ 
Sbjct: 61  EELKDLVKRLNDFELQLLLSEEYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLSIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D IEI+I   D +IDTYRASGAGGQH+NTTDSAVRITH+PT VVV CQ ERSQ
Sbjct: 181 EVMPEFNDEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNVVVTCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A  ML+AKLY+ +++++E         + +IGWG QIRSYV  PY MVKD RTN
Sbjct: 241 IKNRERAMKMLQAKLYQKKIEEQEAELAEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  K
Sbjct: 301 TEVGNVQGVMDGDLDMFINAYLRSK 325


>gi|218282777|ref|ZP_03488959.1| hypothetical protein EUBIFOR_01545 [Eubacterium biforme DSM 3989]
 gi|218216361|gb|EEC89899.1| hypothetical protein EUBIFOR_01545 [Eubacterium biforme DSM 3989]
          Length = 346

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 151/343 (44%), Positives = 221/343 (64%)

Query: 12  GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
             FD  +  +++   + +T +P  WQ+  +A+ ++R +  L + +   +E+  +L     
Sbjct: 2   SHFDLSSKNKQIEDYDKQTLEPDFWQDQKKAQQVIRAKNALKDIVDRYEELDLQLNSLND 61

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +    E D  ++    +    +  + E  + + LLS E D N+A LE+H GAGGTES 
Sbjct: 62  TADELKSEFDEELMMIAEEEYMDMDKKFENFEIQVLLSHEYDQNNAILEIHPGAGGTESC 121

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+ML RMYTR+AEK  FK   L+   G+EAGIKS T L++G  AYG+LK E+GVHRLV
Sbjct: 122 DWASMLYRMYTRYAEKHGFKVTVLDYLPGDEAGIKSVTFLVEGDKAYGYLKSEKGVHRLV 181

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+DS +RRHTSF+S+ V P  +D IEI+I   D  ++T RASGAGGQH+N TDSAVR
Sbjct: 182 RISPFDSGARRHTSFASLDVMPQFNDEIEIDIKPEDLIVETKRASGAGGQHINKTDSAVR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           + H PTG+V  CQ  RSQH+N+ +   +L+++LY+LE++++E+     +  ++   WG Q
Sbjct: 242 MVHKPTGIVATCQNGRSQHENREECLRVLKSRLYQLEIEEQEKKIAQIKGVQSANEWGSQ 301

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IRSYV+ PY +VKD+RT  E +    VLDGDLD+F+ A L  +
Sbjct: 302 IRSYVMHPYSLVKDVRTGYETSQVQSVLDGDLDEFIFAYLKSQ 344


>gi|217077931|ref|YP_002335649.1| peptide chain release factor 2 [Thermosipho africanus TCF52B]
 gi|226739131|sp|B7IE81|RF2_THEAB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|217037786|gb|ACJ76308.1| peptide chain release factor 2 [Thermosipho africanus TCF52B]
          Length = 369

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 166/350 (47%), Positives = 237/350 (67%), Gaps = 2/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +  ++   +  +F  +N  + L  L  +  D   W +  +A+ + ++ Q +   I  +K+
Sbjct: 12  EAKKKFEDIIKVFHPENKRKELEELEKQMGDSDFWSDQRKAREISQKAQRIRKIIDDMKD 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+ +  D    +EL+ E+       +       I+ +V+  + E +L+G+ D+++AYL +
Sbjct: 72  IEAKFEDLDAAIELSDEDQSFVETIKEMVEE--IEKKVKTFELELILNGKFDASNAYLTI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA+MLLRMY RWAE++ F  + ++   GEEAGIKSA + IKG  AYG+L
Sbjct: 130 HPGAGGTESQDWASMLLRMYMRWAERKGFDVQIVDYQPGEEAGIKSAMIYIKGDYAYGYL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+D+N RRHTSF+S+ V P +DD I+IEI+  D RIDTYRASGAGGQ
Sbjct: 190 KYERGVHRLVRISPFDANKRRHTSFASVNVIPEIDDDIDIEINPEDLRIDTYRASGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN T+SAVRITHIPTG+VV CQ ERSQ +NK  A  +L+A+LY+LEL+KR++     + 
Sbjct: 250 YVNKTESAVRITHIPTGIVVTCQTERSQLQNKETALKVLKARLYQLELEKRQKQLEEIQG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +I WG QIRSYV QPY MVKD RTN+E  +   V+DG++D F+++ L
Sbjct: 310 ELKDISWGNQIRSYVFQPYTMVKDHRTNVETGNIDAVMDGEIDIFIESEL 359


>gi|297159934|gb|ADI09646.1| peptide chain release factor 2 [Streptomyces bingchenggensis BCW-1]
          Length = 383

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 160/353 (45%), Positives = 216/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +     +L   +   +E+
Sbjct: 26  LSSTMGSIEAVLDLDKMRADIAVLEEQAAAPSLWDDPENAQKITSRLSYLQGQLRKAEEL 85

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA  EDD     E    L  ++  V+  +  +LLSGE DS +A + + 
Sbjct: 86  RSRIDDLEVLFELADAEDDADARAEAVAELDSVRKAVDEMEVRTLLSGEYDSREALVNIR 145

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  +    EEAGIKS T  ++ P AYG L 
Sbjct: 146 AEAGGVDAADFAEQLQRMYLRWAERHGYKTEVYDTSYAEEAGIKSTTFAVQIPYAYGTLS 205

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ RID YR+SG GGQ 
Sbjct: 206 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEKTDHIEIDESELRIDVYRSSGPGGQG 265

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   +  +  
Sbjct: 266 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMDALKGD 325

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  VLDG+LD F++A +  +K
Sbjct: 326 GGN-SWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGELDGFLEAGIRWRK 377


>gi|75759027|ref|ZP_00739135.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|228903659|ref|ZP_04067779.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 4222]
 gi|228911012|ref|ZP_04074820.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 200]
 gi|228968278|ref|ZP_04129276.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|74493493|gb|EAO56601.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|228791451|gb|EEM39055.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228848667|gb|EEM93513.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 200]
 gi|228855927|gb|EEN00467.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 4222]
          Length = 326

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 164/325 (50%), Positives = 215/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
                 W +   A+ ++ E   L + +   +++ +   +  +  EL  EE D  + +E  
Sbjct: 1   MMSAGFWDDQQGAQAVINEANALKDMVGSFRQLDETFENLEVTHELLKEEYDEDLHEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR 
Sbjct: 61  SEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D +EIE+   D +IDTYRASGAGGQHVNTTDSAVRITH PT  VV CQ ERSQ
Sbjct: 181 EVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+  A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DG++D F+ A L  +
Sbjct: 301 TEVGNVQAVMDGEIDPFIDAYLRSR 325


>gi|307297404|ref|ZP_07577210.1| peptide chain release factor 2 [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306916664|gb|EFN47046.1| peptide chain release factor 2 [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 370

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 162/350 (46%), Positives = 230/350 (65%), Gaps = 2/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  + + +    D +   ++L  +  +  DP +W +  EA  L RE Q   + I  +++
Sbjct: 12  ELKEKFDSIRATLDLERIDEKLKEIEKRMSDPSIWNDQREASNLGREAQSYRSTIELLRD 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +++      I +EL    +D S ++   + ++  + +V   +   LLSGE D N+ ++ +
Sbjct: 72  VEEEFESIEIAVEL--SGEDESYVKHVEELVRSAEKKVREFELTILLSGEYDINNCFISI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA+ML+RMY RWAE  +FK   ++   GEEAGIKS T+ + GP+AYG +
Sbjct: 130 HPGAGGTESQDWASMLMRMYMRWAEANRFKITIVDELPGEEAGIKSVTINLAGPHAYGKM 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+N RRHTSF+S+ V+P +D+  EIEI   D +IDTYR+ GAGGQ
Sbjct: 190 KFEAGVHRLVRISPFDANHRRHTSFASVSVFPEMDEVPEIEIRPEDLKIDTYRSGGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITH+PTG+VV CQ ERSQH+NKA A  ML AKL+E+E++K+         
Sbjct: 250 HVNKTDSAVRITHLPTGIVVACQTERSQHQNKANAMKMLYAKLFEIEIEKKRSEKLKLMG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + EI WG QIRSYV QPY +VKD RT+ E      V++G++D+F++  L
Sbjct: 310 DQKEISWGNQIRSYVFQPYTLVKDHRTDFETGDIQSVMNGEIDEFIEKEL 359


>gi|320528516|ref|ZP_08029673.1| peptide chain release factor 2 [Solobacterium moorei F0204]
 gi|320131102|gb|EFW23675.1| peptide chain release factor 2 [Solobacterium moorei F0204]
          Length = 350

 Score =  267 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 152/340 (44%), Positives = 214/340 (62%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           LFD +   +RL+  N    +   W +  +A+ ++RE   L   I     + D   +    
Sbjct: 4   LFDLEGKEKRLAENNALMAEADFWNDQKKAQKIIRESNQLKVLIETHHSLTDSFAELSEG 63

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +       D  + +  S+       + E  + + LLSG  D++++ LE+H GAGGTE+ D
Sbjct: 64  IGELSSSFDEDMNELISEEYTETMKKFEEFEIQVLLSGPYDNHNSILEIHPGAGGTEAMD 123

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA ML RMY RWAE++ FK E ++  +GEEAG+KS ++LI+GP AYG+LK E GVHRLVR
Sbjct: 124 WAAMLYRMYMRWAERKGFKIELMDYQEGEEAGMKSCSVLIQGPMAYGYLKAENGVHRLVR 183

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+DSN+RRHTSF+S+ + P  +D +EIEI + D  I T RASGAGGQH+N TDSAVR+
Sbjct: 184 ISPFDSNARRHTSFASVEIMPEFEDDLEIEIDDKDLDIITMRASGAGGQHINKTDSAVRM 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           THIP+G+ V CQ +RSQ +N+    NML++KL +L++++ EE A           WG QI
Sbjct: 244 THIPSGITVFCQSQRSQIQNREACLNMLKSKLLQLKIRENEERAAAVRGEVKANEWGSQI 303

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           RSYV  PY MVKDLRT  E  +   V+DG++D F+ + L 
Sbjct: 304 RSYVFAPYTMVKDLRTGHEAGNVQAVMDGEIDGFIDSYLR 343


>gi|242129269|gb|ACS83718.1| peptide chain release factor 2 [uncultured bacterium AOCefta2]
          Length = 367

 Score =  267 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 163/344 (47%), Positives = 219/344 (63%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD          L  ++     W +   A+  +++   L   +     +     D+L
Sbjct: 18  RSIFDVAGKRVDAERLEAESAAGDFWNDNQRAQEHLKKLTALKRVVEPWDALDRDTSDSL 77

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            + E+   E D S+  E       +   +   +F+S+LS   D +D++L +H GAGGTES
Sbjct: 78  EMAEMLKAEGDESMAPELEKQAAELAQRLNDLEFKSMLSEAEDVSDSFLHIHPGAGGTES 137

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWANMLLRMYTRWAE++ FK E +++  GE AGI   TL ++G  A+G+LK E GVHRL
Sbjct: 138 CDWANMLLRMYTRWAERKGFKVELIDLQPGEGAGISRVTLAVRGEYAFGYLKAESGVHRL 197

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+D+N RRHTSF+S+  Y  V D IE+EI + D RIDTYR+SGAGGQHVN TDSAV
Sbjct: 198 VRISPFDANKRRHTSFASVHAYAEVTDDIEVEILDKDLRIDTYRSSGAGGQHVNVTDSAV 257

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIPT +VV CQ ERSQHKNKA A  +LR++LY+L  ++RE         K +I WG 
Sbjct: 258 RITHIPTKIVVSCQNERSQHKNKATAMKVLRSRLYQLYKEQREADQAAKAGEKKDISWGS 317

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           QIRSYV QPYQMVKDLRT++E ++   V+DG +D F++A L  +
Sbjct: 318 QIRSYVFQPYQMVKDLRTDVETSNIGAVMDGAIDPFIEAFLRSQ 361


>gi|218291021|ref|ZP_03495062.1| peptide chain release factor 2 [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218239039|gb|EED06244.1| peptide chain release factor 2 [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 342

 Score =  267 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 165/326 (50%), Positives = 225/326 (69%), Gaps = 1/326 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +   A+ ++ E   + + +  ++ ++  L D  + L+LA EEDD  +  E +
Sbjct: 1   MAAPDFWDDPDRAQKIISEMNGVKSVVDTMRRLESLLQDAEVALQLAQEEDDHDLFAEAN 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              +++K E++  + + +LSGE D N+A LE+H GAGGTESQDWA+MLLRMYTRWAE   
Sbjct: 61  RLAEQLKSEMDEFELQVMLSGEYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEDHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K E L+   GEEAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF+S+
Sbjct: 121 YKVEVLDYLPGEEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFASV 180

Query: 210 WVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
            V P + +D   IEI   + RIDTYR++GAGGQHVNTTDSAVRITHIPTG+VV CQ ERS
Sbjct: 181 DVIPEIAEDDDSIEIRPEELRIDTYRSTGAGGQHVNTTDSAVRITHIPTGIVVTCQSERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q +N+A+A  +L+++L     ++RE+        + EI WG QIRSYV  PY +VKD RT
Sbjct: 241 QIQNRARAMEILKSRLAAKRREEREQELAQLRGEQKEIAWGSQIRSYVFHPYSLVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
           N E ++   V+DG++D F+ A L  +
Sbjct: 301 NYETSNTQAVMDGEIDPFIHAYLRWQ 326


>gi|227518951|ref|ZP_03949000.1| peptide chain release factor RF2 [Enterococcus faecalis TX0104]
 gi|227553571|ref|ZP_03983620.1| peptide chain release factor RF2 [Enterococcus faecalis HH22]
 gi|256961736|ref|ZP_05565907.1| peptide chain release factor 2 [Enterococcus faecalis Merz96]
 gi|293383442|ref|ZP_06629355.1| peptide chain release factor 2 [Enterococcus faecalis R712]
 gi|293388904|ref|ZP_06633389.1| peptide chain release factor 2 [Enterococcus faecalis S613]
 gi|312907729|ref|ZP_07766720.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 512]
 gi|312910347|ref|ZP_07769194.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 516]
 gi|227073640|gb|EEI11603.1| peptide chain release factor RF2 [Enterococcus faecalis TX0104]
 gi|227177301|gb|EEI58273.1| peptide chain release factor RF2 [Enterococcus faecalis HH22]
 gi|256952232|gb|EEU68864.1| peptide chain release factor 2 [Enterococcus faecalis Merz96]
 gi|291079233|gb|EFE16597.1| peptide chain release factor 2 [Enterococcus faecalis R712]
 gi|291081685|gb|EFE18648.1| peptide chain release factor 2 [Enterococcus faecalis S613]
 gi|310626757|gb|EFQ10040.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 512]
 gi|311289620|gb|EFQ68176.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 516]
 gi|315576028|gb|EFU88219.1| peptide chain release factor 2 [Enterococcus faecalis TX0309B]
 gi|315580603|gb|EFU92794.1| peptide chain release factor 2 [Enterococcus faecalis TX0309A]
          Length = 327

 Score =  267 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 169/325 (52%), Positives = 218/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N   A+ L+ E   L        ++ + + +  ++ EL  EE D  I +E  
Sbjct: 1   MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEEIDELTVMFELQQEEYDAEIQEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  ++  +   +   LL+   D N+A +E+H GAGGTESQDW +MLLRMYTRWAE   
Sbjct: 61  ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+ E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+
Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEI I+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ
Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA +ML+AKLY+LE++K+ + A      + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  +
Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325


>gi|257090077|ref|ZP_05584438.1| peptide chain release factor [Enterococcus faecalis CH188]
 gi|312903512|ref|ZP_07762692.1| peptide chain release factor 2 [Enterococcus faecalis TX0635]
 gi|256998889|gb|EEU85409.1| peptide chain release factor [Enterococcus faecalis CH188]
 gi|310633388|gb|EFQ16671.1| peptide chain release factor 2 [Enterococcus faecalis TX0635]
 gi|315162421|gb|EFU06438.1| peptide chain release factor 2 [Enterococcus faecalis TX0645]
 gi|315577792|gb|EFU89983.1| peptide chain release factor 2 [Enterococcus faecalis TX0630]
          Length = 327

 Score =  267 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 170/325 (52%), Positives = 218/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N   A+ L+ E   L        ++ + L +  ++ EL  EE D  I +E  
Sbjct: 1   MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  ++  +   +   LL+   D N+A +E+H GAGGTESQDW +MLLRMYTRWAE   
Sbjct: 61  ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+ E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+
Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEI I+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ
Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA +ML+AKLY+LE++K+ + A      + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  +
Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325


>gi|329571835|gb|EGG53513.1| peptide chain release factor 2 [Enterococcus faecalis TX1467]
          Length = 327

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 169/325 (52%), Positives = 217/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N   A+ L+ E   L        ++ + L +  ++ EL  EE D  I +E  
Sbjct: 1   MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDTEIQEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  ++  +   +   LL+   D N+A +E+H GAGGTESQDW +MLLRMYTRWAE   
Sbjct: 61  ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+ E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRI P+DS  RRHTSF S+
Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRILPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEI I+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ
Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA +ML+AKLY+LE++K+ + A      + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  +
Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325


>gi|118602328|ref|YP_903543.1| peptide chain release factor 2 [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|118567267|gb|ABL02072.1| bacterial peptide chain release factor 2 (bRF-2) [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
          Length = 364

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 167/351 (47%), Positives = 231/351 (65%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   L      +    RL  +  + E+P++W N  +A++L +E+  L +     K++
Sbjct: 13  LKQRTIVLLTHISLEKKQARLEEVLLEMENPNIWTNPDQAQVLGQEKSKLTSICQTFKQV 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LL +A  E+D     +  D+L  I+  +E  +FE + SG+ D N AYL++ 
Sbjct: 73  NSVLEDAQELLNMAQTENDEDTANDIIDDLDTIQSSIEKLEFERMFSGDLDVNSAYLDIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +G+GGTE+QDWA M+LRMY RW EK  FK + +E   GE  GIKSAT+   G  A+GWL+
Sbjct: 133 SGSGGTEAQDWAEMVLRMYLRWGEKHNFKVKLMETSAGEVTGIKSATIHFDGKYAFGWLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+++N +RHTSF S++V P VD+ I+I+I+  D R+DTYRASGAGGQH
Sbjct: 193 TEIGIHRLVRKSPFNANGKRHTSFCSVFVSPEVDNDIDIDINPLDLRVDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+PT ++VQCQ  RSQ  NK QA   L++KLYELE+QKR       E  
Sbjct: 253 VNKTESAVRITHLPTNIIVQCQDGRSQRANKDQAMKQLKSKLYELEIQKRNAEKQSLEDK 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K+ IGWG QIRSYVL     +KDLRT +E T+ +DVLDG+LD F++A+L  
Sbjct: 313 KSNIGWGHQIRSYVLD-QSRIKDLRTGVESTNTNDVLDGNLDQFIEASLKA 362


>gi|291087933|ref|ZP_06347924.2| peptide chain release factor 2 [Clostridium sp. M62/1]
 gi|291073455|gb|EFE10819.1| peptide chain release factor 2 [Clostridium sp. M62/1]
          Length = 343

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 157/333 (47%), Positives = 225/333 (67%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +R+  L+   E+P  W +   +  LMRE ++L + +   ++++    D  ++LE+  EE+
Sbjct: 2   KRIDELDKSMEEPGFWDDPEMSTRLMREAKNLKDTVESYRKLEQEYEDIQVMLEMGYEEN 61

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D S++ E    +     ++E  + ++LLSGE D+N+A L+++AGAGGTE+ DW +ML RM
Sbjct: 62  DPSLIPEIQGMMDDFVEKLEAIRIQTLLSGEYDNNNAILKLNAGAGGTEACDWCSMLYRM 121

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y RWA+K+ F T  ++  DGEEAGIKS TL I G NAYG+LK E+GVHRLVRISP++S  
Sbjct: 122 YQRWADKKGFTTAVIDYLDGEEAGIKSITLQINGENAYGFLKSERGVHRLVRISPFNSAG 181

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           +R TSF S  V P + + +++EI+  + RIDTYR+SGAGGQH+N T SA+RITH+PTG+V
Sbjct: 182 KRQTSFVSCDVMPDIKEDLDVEINPDELRIDTYRSSGAGGQHINKTSSAIRITHLPTGIV 241

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           VQCQ ERSQ +NK  A  ML+ KLY L+ ++  E  +       +I +G QIRSYV+QPY
Sbjct: 242 VQCQNERSQFQNKEVAMQMLKTKLYMLKQEEHAEKLSDIRGDVKDINFGNQIRSYVMQPY 301

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            +VKD RT  E  + + VLDGD+D F+ A L  
Sbjct: 302 TLVKDHRTGAESGNVNAVLDGDIDLFISAYLKW 334


>gi|294102045|ref|YP_003553903.1| hypothetical protein Amico_1055 [Aminobacterium colombiense DSM
           12261]
 gi|293617025|gb|ADE57179.1| hypothetical protein Amico_1055 [Aminobacterium colombiense DSM
           12261]
          Length = 368

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 163/354 (46%), Positives = 219/354 (61%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L    + L    D      ++  L  KT  P  W    EA+ + +E     + +   K+
Sbjct: 12  ELRSLKDELQESLDLPILEIKIQELEEKTLKPDFWG-SDEARKVTQELARYQDKLDSWKK 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I +   D  I+ E+  EE+D  + ++       +K E+E +Q   LLS + D  +A + V
Sbjct: 71  IAEDYEDLEIIEEMLKEEEDRELQKDFEQKAFSLKKEIERQQLIELLSEDYDQGNAIVSV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAG+GG +SQDWA ML RMY RW E+  F+ + L++    E GI + TLL++G  AYG+L
Sbjct: 131 HAGSGGLDSQDWAEMLYRMYARWMEQNDFRVKVLDLIKDSEGGISNVTLLVEGSYAYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+DS  RRHTSF+S+ + P + +  +IEI   D RIDTYR+SGAGGQ
Sbjct: 191 KSEKGVHRLVRISPFDSAGRRHTSFASVDIVPELPEDEDIEIRTEDLRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITH P+G+VV CQ ERSQH NKA A  +L++KLYE  +++R    +    
Sbjct: 251 HVNMTDSAVRITHFPSGIVVSCQNERSQHMNKAVAMQVLKSKLYERAIEERRNEMDTIIG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            K EI WG QIRSYVL PY +VKD RT  E  +   VLDGD+DDF+ A L  KK
Sbjct: 311 EKKEISWGSQIRSYVLHPYTLVKDHRTGEETGNVQAVLDGDIDDFIMAYLRWKK 364


>gi|328882777|emb|CCA56016.1| Peptide chain release factor 2 [Streptomyces venezuelae ATCC 10712]
          Length = 367

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 161/353 (45%), Positives = 220/353 (62%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D +     ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMGSIEAVLDLEKLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAETL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA E DD   L E    L  ++  ++  +  +LLSGE D  +A + + 
Sbjct: 73  RGRIDDLAVLFELAEEMDDPDTLAEAEAELTSVRKALDEMEVRTLLSGEYDEREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  + TE  E    EEAGIKS T ++K P AYG L 
Sbjct: 133 AEAGGVDASDFAERLQRMYLRWAERHGYSTEVYETSYAEEAGIKSTTFVVKAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + + PVV+ S  +EI ES+ R+D YRASG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVESSDHVEIDESELRVDVYRASGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A N+L+AKL  LE Q++EE A +    
Sbjct: 253 VNTTDSAVRITHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERQRQEERAKMDALK 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +   WG Q+RSYVL PYQMVKDLRT  E  +P  VLDG++D F++A +  +K
Sbjct: 311 DSGSSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQSVLDGEIDGFLEAGIRWRK 363


>gi|167462917|ref|ZP_02328006.1| peptide chain release factor 2 in translation [Paenibacillus larvae
           subsp. larvae BRL-230010]
 gi|322383023|ref|ZP_08056853.1| peptide chain release factor 2-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
 gi|321153046|gb|EFX45506.1| peptide chain release factor 2-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
          Length = 332

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 166/325 (51%), Positives = 223/325 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +  +A+  + E   +  ++   + +     D  ++ +LA EEDD S+  E +
Sbjct: 1   MAAPDFWDDQEKAQKTIAELNAIKGSVEQFQALSSEFGDIEVMAQLAEEEDDESLAAEVA 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           ++++ I  ++E  + + LLS   D  +A LE+H GAGGTESQDWA MLLRMY RWAEK  
Sbjct: 61  ESIKGIVGKLEGFELQLLLSQPYDRLNAILELHPGAGGTESQDWAEMLLRMYRRWAEKHD 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+D++ RRHTSF S 
Sbjct: 121 FKVEVLDYLPGDEAGVKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD +++EI   D +IDTYRASGAGGQH+NTTDSAVRITHIPTG+VV CQ ERSQ
Sbjct: 181 DVVPEIDDDVDVEIRSEDLKIDTYRASGAGGQHINTTDSAVRITHIPTGIVVTCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A  +LR+KLYE +++++E+        +++I WG QIRSYV  PY MVKD RT+
Sbjct: 241 IKNRERAMKLLRSKLYEKKIEEQEKHLAEIRGEQSDIAWGSQIRSYVFHPYSMVKDHRTS 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  +
Sbjct: 301 AETGNAGAVMDGDLDMFIDAYLRQQ 325


>gi|257416283|ref|ZP_05593277.1| peptide chain release factor 2 [Enterococcus faecalis AR01/DG]
 gi|257158111|gb|EEU88071.1| peptide chain release factor 2 [Enterococcus faecalis ARO1/DG]
          Length = 327

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 170/325 (52%), Positives = 218/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N   A+ L+ E   L        ++ + L +  ++ EL  EE D  I +E  
Sbjct: 1   MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  ++  +   +   LL+   D N+A +E+H GAGGTESQDW +MLLRMYTRWAE   
Sbjct: 61  ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+ E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+
Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEI I+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ
Sbjct: 181 DVMPELDDTIEIAINLDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA +ML+AKLY+LE++K+ + A      + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  +
Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325


>gi|149183327|ref|ZP_01861766.1| peptide chain release factor 2 [Bacillus sp. SG-1]
 gi|148848954|gb|EDL63165.1| peptide chain release factor 2 [Bacillus sp. SG-1]
          Length = 327

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 168/325 (51%), Positives = 220/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +  +A+ ++ E   L   ++  K++Q+   +  + LEL  EE+D  + +E  
Sbjct: 1   MLQPDFWNDQQQAQGVINEANGLKELVNEYKDMQEMQENLEVTLELVKEENDAELQEELV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +  + +   +   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMY RWAEK+ 
Sbjct: 61  EETKDLNKRLNEYELQLLLSEPHDKNNAILELHPGAGGTESQDWGSMLLRMYQRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  ++ IEI+I   D +IDTYRASGAGGQH+NTTDSAVRITH PTGVVV CQ ERSQ
Sbjct: 181 EVMPEFNEEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHQPTGVVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML+AKLY+  ++++E+        + +IGWG QIRSYV  PY MVKD RTN
Sbjct: 241 IKNREQAMKMLKAKLYQKRIEEQEQELAEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGD++ F+ A L  +
Sbjct: 301 TEMGNVQAVMDGDINGFINAYLRSR 325


>gi|291531340|emb|CBK96925.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium
           siraeum 70/3]
          Length = 370

 Score =  266 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 166/347 (47%), Positives = 230/347 (66%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  L G  D DN    ++ L  ++  P  W +V  ++ + ++     N +   +++++  
Sbjct: 18  LKELAGALDLDNLKTEIAKLEEQSAQPDFWNDVENSQKISQKIGEDKNIVQSYEKLRESY 77

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D + +LELA EEDD S+L E  +  +  + E+E ++  +LLSGE D N+A L  HAGAG
Sbjct: 78  DDVMTMLELAQEEDDESMLPEIQELAKHFRTELESQKLATLLSGEFDHNNAILTFHAGAG 137

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW  ML RMY  WAE+   K   L+  DGEEAGIKSA++L++G NAYG+LK E G
Sbjct: 138 GTEAQDWVEMLYRMYNHWAEQHGMKVTVLDYLDGEEAGIKSASILVEGRNAYGYLKSENG 197

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR+SP+DS+ RRHTSF+S+ V P +++ I+IEISE + ++D YRASGAGGQ VN T
Sbjct: 198 VHRLVRVSPFDSSGRRHTSFASVEVMPEINEDIDIEISEDEIKMDVYRASGAGGQKVNKT 257

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVRITHIPTG+V  CQ ERSQH+N+  A  ML++KL E++ ++  +  +  +  + +I
Sbjct: 258 SSAVRITHIPTGIVCACQTERSQHQNREYAMRMLKSKLLEIKEREHLDKISDIKGEQLQI 317

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            WG QIRSYV  PY MVKD RT  E  +   V+DGDLD F+ A L  
Sbjct: 318 AWGAQIRSYVFMPYTMVKDHRTGYEMGNIGAVMDGDLDGFINAYLKA 364


>gi|254468217|ref|ZP_05081623.1| peptide chain release factor 2 [beta proteobacterium KB13]
 gi|207087027|gb|EDZ64310.1| peptide chain release factor 2 [beta proteobacterium KB13]
          Length = 351

 Score =  266 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 168/343 (48%), Positives = 239/343 (69%), Gaps = 1/343 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G +FD DN  ++L  L  + EDP +W++   ++ + +E++ L++ I   +++   + +N 
Sbjct: 8   GAIFDLDNKKEQLKELTRQQEDPKIWEDHSLSQKIGKEKRILEDTIQEFEQLNSGIENNK 67

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L +LA EE D S L +   +   +  ++   +F+ + S   D N+ +++  +G+GGTE+
Sbjct: 68  ELFDLAFEESDDSTLNDLFQDTINLDKKLGQLEFKRMFSNPLDPNNCFIDFQSGSGGTEA 127

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWANMLLRMY R+ E++ FK E +EI +GE AGIK AT+ I G  AYG+ + E G+HRL
Sbjct: 128 QDWANMLLRMYLRYCEEKGFKVEVMEITEGEVAGIKGATIKIIGDYAYGYFRTETGIHRL 187

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP+DS SRRHTSF+ + VYP +D+S+EI+I+ +D RIDTYRASGAGGQH+N TDSAV
Sbjct: 188 VRKSPFDSGSRRHTSFAGVNVYPEIDESVEIDINPADLRIDTYRASGAGGQHINKTDSAV 247

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH P+GVVVQCQ +RSQH+NKAQA +ML+A+LY +EL KR E     E +K++IGWG 
Sbjct: 248 RITHEPSGVVVQCQNDRSQHRNKAQAMDMLKAQLYRIELDKRNEEKQAMEDAKSDIGWGH 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QIRSYVL     +KDLRT +E  +   VLDG+LD F+  +L  
Sbjct: 308 QIRSYVLD-QSRIKDLRTGVEVGNTQGVLDGNLDPFITESLKQ 349


>gi|297626158|ref|YP_003687921.1| peptide chain release factor 2 (RF-2) [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
 gi|296921923|emb|CBL56483.1| Peptide chain release factor 2 (RF-2) [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
          Length = 369

 Score =  266 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 159/354 (44%), Positives = 222/354 (62%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L++ L+ +  + D     +++  L T+   P LW +   A+ +      L +++  ++ 
Sbjct: 12  QLNKSLSSIEAVVDVPAKNKQIEELETEASAPDLWNDQEHAQSVTSRLSRLQSSVEKVQT 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D   LLELA EE D    QE    +  +  E++  + ++LLSGE D  DA + +
Sbjct: 72  LRSRLDDASTLLELASEESDADTAQEAEKEIATLADEIDTLEVQTLLSGEYDERDALVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            + AGG ++ D+A MLLRMY RWAE+  +  E  +I   EEAGIKSAT  +K P AYG L
Sbjct: 132 RSEAGGVDAADFAAMLLRMYERWAERHAYSYEVYDISYAEEAGIKSATFTVKSPYAYGTL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ + V PVV+++  I+I E D R+D + ASG GGQ
Sbjct: 192 SVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDNIDIPEKDIRVDVFHASGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA    +L+AKL E   Q+RE   +  +S
Sbjct: 252 GVNTTDSAVRITHLPTGIVVTCQNERSQIQNKAAGLRVLQAKLLERARQEREAEMDALKS 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                 WG Q+RSYVL PYQMVKDLRT  E  SP +V DGD+D F++  +  ++
Sbjct: 312 DGN--SWGSQMRSYVLHPYQMVKDLRTGFESGSPDNVFDGDIDGFIERGIRWRR 363


>gi|239618275|ref|YP_002941597.1| peptide chain release factor 2 [Kosmotoga olearia TBF 19.5.1]
 gi|259585228|sp|C5CGS4|RF2_KOSOT RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|239507106|gb|ACR80593.1| peptide chain release factor 2 [Kosmotoga olearia TBF 19.5.1]
          Length = 370

 Score =  266 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 171/350 (48%), Positives = 227/350 (64%), Gaps = 2/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +   +    D D   ++LS +  +  DP +W +   A  L ++ Q L + +  + +
Sbjct: 12  ELRDKFENIKTTVDVDKIKEKLSRIEKELSDPSVWSDQRRAGKLGQQAQALRSQLDLLNK 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +Q+   +  I +EL+ E++               +  V+  +   LLS   D+ +AYL V
Sbjct: 72  VQELFENIDIAVELSEEDESYLENLNELLKEA--EDMVKEFELNILLSSPYDAYNAYLSV 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA+MLLRMY RWAE+  +K   +E   GEEAGIKSAT+ I GP AYG L
Sbjct: 130 HPGAGGTESQDWASMLLRMYIRWAERNNYKVTTIEEQPGEEAGIKSATINIAGPYAYGKL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+N RRHTSF+S+ V+P +DD +EI+I   D +IDTYRA GAGGQ
Sbjct: 190 KYEAGVHRLVRISPFDANHRRHTSFASVSVFPEMDDDVEIDIRPEDLKIDTYRAGGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+VV CQ ERSQH+NKA A  +L+AKL+ELEL+K+ +       
Sbjct: 250 HVNRTESAVRITHIPTGIVVTCQNERSQHQNKATAMKILKAKLFELELEKKRQEKMKLMG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + +I WG QIRSYV QPY MVKD RTN E      V+DG +DDF++  L
Sbjct: 310 EQKDIAWGNQIRSYVFQPYTMVKDHRTNYETGDVQAVMDGYIDDFIEKEL 359


>gi|154250427|ref|YP_001411252.1| peptide chain release factor 2 [Fervidobacterium nodosum Rt17-B1]
 gi|154154363|gb|ABS61595.1| peptide chain release factor 2 [Fervidobacterium nodosum Rt17-B1]
          Length = 364

 Score =  266 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 166/350 (47%), Positives = 238/350 (68%), Gaps = 2/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L ++ + +  +F  ++  ++L  L ++T  P  W +  +A+ + RE Q +   +  +++
Sbjct: 7   ELKKKYDDIIEVFHPEDKKEKLKELESETLKPDFWNDQKKAQQINREIQRIRRIVEDMEK 66

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+    D  + +ELA E+       E   +    K+     +   +L+G+ D ++AYL +
Sbjct: 67  IKVLFEDIEVGIELAEEDPSMQEHLEQIVDEVGEKI--REFELALILNGKFDGSNAYLSI 124

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA+MLLRMY RWAE++ F  E ++  +GEEAGIKSATL IKG  AYG+L
Sbjct: 125 HPGAGGTESQDWASMLLRMYMRWAERKGFSVELVDYQEGEEAGIKSATLYIKGDFAYGYL 184

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+D+N RRHTSF+S+ V P ++D I+IEI   D R+DTYRASGAGGQ
Sbjct: 185 KYERGVHRLVRISPFDANKRRHTSFASVNVLPEIEDDIDIEIRPEDLRVDTYRASGAGGQ 244

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN T+SA+RITH+PTG+VV CQ ERSQ +N+  A  ML+A+LY+LEL+KR +     + 
Sbjct: 245 YVNKTESAIRITHLPTGIVVTCQTERSQLQNRETAMKMLKARLYQLELEKRRKQIEQIQG 304

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +I WG QIRSYV QPY MVKD RT++E  +   V+DG++D F++A L
Sbjct: 305 ELRDISWGNQIRSYVFQPYTMVKDHRTDVETGNIEAVMDGEIDMFIEAEL 354


>gi|303229877|ref|ZP_07316653.1| peptide chain release factor 2 [Veillonella atypica
           ACS-134-V-Col7a]
 gi|303232076|ref|ZP_07318779.1| peptide chain release factor 2 [Veillonella atypica ACS-049-V-Sch6]
 gi|302513182|gb|EFL55221.1| peptide chain release factor 2 [Veillonella atypica ACS-049-V-Sch6]
 gi|302515433|gb|EFL57399.1| peptide chain release factor 2 [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 330

 Score =  266 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 165/325 (50%), Positives = 227/325 (69%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W N  +A+ + +E   L N++   K++   + D  ++L++A+EE+D S+  E  
Sbjct: 1   MSDPTFWDNPDKAREISQEATQLKNSVEGYKQLVSDIEDASVMLDMAIEEEDTSMEGEIK 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             +  I+  VE ++   LL GE D N+A L  HAGAGGTE+QDW +ML+RMY RWAEK  
Sbjct: 61  QFVNGIQEAVEKQEVLLLLGGEYDQNNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKTG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E ++   G+EAGIKSAT LIKG NA+G+LK E+GVHRLVRISP+D+ +RRHTSF+++
Sbjct: 121 FSVELMDEQPGDEAGIKSATFLIKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD++EI I   D ++DTYRASGAGGQH+N TDSAVR+TH PTG+VVQCQ +RSQ
Sbjct: 181 DVMPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQSQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+ QA  +LRAKL+ELEL+K+ E+      +   I WG QIRSYV  PY MVKD RT+
Sbjct: 241 MQNREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNMVKDHRTS 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DG++D F++  L  +
Sbjct: 301 VETGNVQAVMDGNIDQFIEGYLKKE 325


>gi|312126885|ref|YP_003991759.1| hypothetical protein Calhy_0649 [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311776904|gb|ADQ06390.1| hypothetical protein Calhy_0649 [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 370

 Score =  266 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 171/349 (48%), Positives = 233/349 (66%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
              L  +    D D     L  L ++T  P  WQ++  ++ ++++ + L + I   +++ 
Sbjct: 13  EEDLKEMRVSLDIDRLESELKSLESETSRPDFWQDLENSQKVLQKIKRLKDKIERFQKLY 72

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            +  D  +L EL+LEE +  + +E    L  ++ ++E  + E LL+G  D N+A L +HA
Sbjct: 73  SQWEDLKVLTELSLEEGNHEMAEELEKELLDLERKIEDFKIEVLLNGPYDKNNAILSIHA 132

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDWA MLLRMYTRWA K+ +K E L+I  GEEAGIK+ T+ I G NAYG+LK 
Sbjct: 133 GAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTVRIVGENAYGYLKA 192

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+D+  RRHTSF+++ V P V+D  +IEI E D  IDT+RASGAGGQHV
Sbjct: 193 EKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTFRASGAGGQHV 252

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRI HIPTG+VV CQ ERSQHKN+  A  +L+AKL EL+ ++R E     +  +
Sbjct: 253 NKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQ 312

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           TEIGWG QIRSYV  PY +VKD RT  E  +   V+DG++D F+ A L 
Sbjct: 313 TEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 361


>gi|302534760|ref|ZP_07287102.1| peptide chain release factor 2 [Streptomyces sp. C]
 gi|302443655|gb|EFL15471.1| peptide chain release factor 2 [Streptomyces sp. C]
          Length = 369

 Score =  266 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 162/353 (45%), Positives = 218/353 (61%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMGSIEAVLDLDKLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTETL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA E DD   L E    L  ++  ++  +  +LLSGE    +A + + 
Sbjct: 73  RGRIDDLAVLFELAQEMDDADTLAEAEAELVSVRKALDEMEVRTLLSGEYAEREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  + TE  E    EEAGIKS T ++K P AYG L 
Sbjct: 133 AEAGGVDASDFAERLQRMYLRWAERHGYPTEIYETSYAEEAGIKSTTFVVKAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ S  +EI ES+ R+D YRASG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVETSDHVEIDESELRVDVYRASGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV CQ ERSQ +NKA A N+L+AKL  LE +++EE A +    
Sbjct: 253 VNTTDSAVRITHIPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEEQARMDALK 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  VLDG++D F++A +  +K
Sbjct: 311 DGGSSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLEAGIRWRK 363


>gi|114798643|ref|YP_760613.1| peptide chain release factor 2, programmed frameshift [Hyphomonas
           neptunium ATCC 15444]
 gi|123128746|sp|Q0C0Y0|RF2_HYPNA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|114738817|gb|ABI76942.1| peptide chain release factor 2, programmed frameshift [Hyphomonas
           neptunium ATCC 15444]
          Length = 368

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 201/352 (57%), Positives = 249/352 (70%), Gaps = 2/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+      L    DWD A +RL  L   +E P+ W +  EA+ +MRERQ L + I+ ++ 
Sbjct: 11  KIESSAALLRRRLDWDTATKRLDELTALSERPNFWDDPQEAQAMMRERQKLADGIALVQT 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  + D   L+ELA  +       E +      +         +LLSGEAD ND YL++
Sbjct: 71  LEKDVADAPELMELAEGDASMLADLEATLRRAAARAAEAEL--AALLSGEADGNDCYLQI 128

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AG GGTESQDWA++L RMY RWAEKR +  E L+  DGEEAGIKSATL IKG NAYGWL
Sbjct: 129 NAGEGGTESQDWASILRRMYVRWAEKRGYGVELLDERDGEEAGIKSATLQIKGENAYGWL 188

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K EQGVHRLVRISP+DS++RRHTSFSS+ V PV+DD I++EI+ SD R DTYRASGAGGQ
Sbjct: 189 KSEQGVHRLVRISPFDSSARRHTSFSSVAVSPVIDDKIDVEINPSDVRTDTYRASGAGGQ 248

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVR+THIPT  VVQCQ  RSQH+N+ +AW MLR+KLYELELQKR  +A+   +
Sbjct: 249 HVNRTDSAVRLTHIPTNTVVQCQAGRSQHQNRDEAWKMLRSKLYELELQKRRAVADAQYA 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            K+ IG+G QIRSYVLQPYQMVKDLRT +E +  S VLDGD+D F+ A LA 
Sbjct: 309 DKSAIGFGHQIRSYVLQPYQMVKDLRTEVETSDTSGVLDGDIDRFLSAALAA 360


>gi|313837551|gb|EFS75265.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA2]
 gi|314927570|gb|EFS91401.1| peptide chain release factor 2 [Propionibacterium acnes HL044PA1]
 gi|314972490|gb|EFT16587.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA3]
 gi|328907839|gb|EGG27602.1| peptide chain release factor 2 [Propionibacterium sp. P08]
          Length = 371

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 220/353 (62%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D +     ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 16  LDASLSSIENVLDPEAKKAEIADLEKQVAAPNLWDDQENAQWVTSRLSALQAEIERLERL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A  +DD   L E +    +++ E++  +   LLSG+ D  +A + + 
Sbjct: 76  RARIEDVHVLLEFATADDDKESLTEATSETVKLREEIDALEVRILLSGQYDEREAVVTIR 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RWAE+  +K E L+    EEAGIKSAT ++  P +YG L 
Sbjct: 136 SEAGGVDAADFAEMLLRMYLRWAERHGYKVEILDTSYAEEAGIKSATFVVHAPFSYGTLS 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 196 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL E   +++E   N  +S 
Sbjct: 256 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSE 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRTN E  +   V DGD+DDF+ A +  ++
Sbjct: 316 GN--SWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIGAGIRWRR 366


>gi|309791264|ref|ZP_07685795.1| hypothetical protein OSCT_1746 [Oscillochloris trichoides DG6]
 gi|308226690|gb|EFO80387.1| hypothetical protein OSCT_1746 [Oscillochloris trichoides DG6]
          Length = 361

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 142/343 (41%), Positives = 215/343 (62%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD     +++S L  +  +P LW +   A+ +M++   L + ++    ++ +L    
Sbjct: 15  GGIFDLATKQEQISSLEERAAEPDLWNDPRTAQGVMQQLTRLKDEVAQWTNLESQLISLD 74

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L++L   E D ++  E +  ++  + E+  ++   LLSG  D  DA++ + AG GGT++
Sbjct: 75  ELIDLTEAEGDATLYTEIAAEVRAAQKELAQRELALLLSGPYDDRDAFVSIQAGMGGTDA 134

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA+M+LRMY RWAE R +    +++  G+EAGIKSATL ++GP AYG ++ E GVHRL
Sbjct: 135 QDWADMMLRMYLRWAETRGYSVTIVDMSAGDEAGIKSATLELRGPYAYGNIRAEAGVHRL 194

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           +R+SP+++   R TSF+ + V P VDD+ E+ I   D RID +R+ G GGQ VNTTDSAV
Sbjct: 195 IRLSPFNAAHTRQTSFARVEVVPEVDDAPEVTIKPEDLRIDVFRSGGHGGQGVNTTDSAV 254

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+TH+PTG+VV CQ ERSQ +N+  A  +LR +L E ELQ++ E          +  +G 
Sbjct: 255 RLTHLPTGIVVTCQNERSQLQNRETAMRVLRGRLLERELQRQLEERARLRGEHRDAAFGS 314

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           Q+R+Y L P  +VKD RT  E ++   VLDG LD F++A L  
Sbjct: 315 QMRTYYLHPSTLVKDHRTEHETSNVYAVLDGQLDPFIEAYLRW 357


>gi|259419215|ref|ZP_05743132.1| peptide chain release factor 2 [Silicibacter sp. TrichCH4B]
 gi|259345437|gb|EEW57291.1| peptide chain release factor 2 [Silicibacter sp. TrichCH4B]
          Length = 374

 Score =  265 bits (678), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 190/352 (53%), Positives = 245/352 (69%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L+ L    +W+ A  RL   N + EDP+LW +   A+ LMR+RQ L +AI   K I
Sbjct: 12  IEKSLDLLAQRMNWETAEFRLEEFNARVEDPNLWDDPAAAQKLMRDRQSLVDAIDTYKGI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D++ L+EL   E+D  ++++  + L+ +K +   K+ E+LL GE D NDA+LE+ 
Sbjct: 72  RQDLDDSVELIELGEMEEDDEVVKDAEETLKALKEKAAQKELEALLDGETDPNDAFLEIK 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+ML RMY RWAE R F  +  E   G EAGIKSAT  IKG NAYGWLK
Sbjct: 132 AGAGGTEACDWASMLARMYVRWAESRGFSVDLQEEQAGAEAGIKSATYQIKGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+   +R  TSF+++  YPV+DD+IEIE++ +D RIDTYR+SGAGGQH
Sbjct: 192 SESGTHRLVRISPFGKGTR-ETSFAAVGAYPVIDDNIEIEVNPADIRIDTYRSSGAGGQH 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY+LEL +R    N    +
Sbjct: 251 VNTTDSAVRITHEPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQLELDRRNAEVNALHEA 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K + GWG QIRSYV+QPYQMVKDLRTN E      VLDGDLD FM ATLA+K
Sbjct: 310 KGDAGWGNQIRSYVMQPYQMVKDLRTNHETADTKGVLDGDLDGFMAATLAMK 361


>gi|227529549|ref|ZP_03959598.1| peptide chain release factor RF2 [Lactobacillus vaginalis ATCC
           49540]
 gi|227350508|gb|EEJ40799.1| peptide chain release factor RF2 [Lactobacillus vaginalis ATCC
           49540]
          Length = 356

 Score =  265 bits (678), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 165/348 (47%), Positives = 222/348 (63%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L   GGLFD D   + ++    K  +P  W + + A+ ++     L +      +++D +
Sbjct: 2   LPASGGLFDLDALDESIAENEQKMAEPGFWDDNVAAQKVINANNELKDKRDTFVKLRDNI 61

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            +    +EL   E D  +  E   +    + E+E  +   LL GE D+ +A LE+H GAG
Sbjct: 62  GNLQTSIELLELEPDDELQSEFEKSFGETQKELEQYRLNQLLDGEYDAKNAILEIHPGAG 121

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW  MLLRMY RW E+  F  E      GEEAGIKS TLLIKG NA+G+L+ E+G
Sbjct: 122 GTEAQDWGAMLLRMYVRWGEQHGFNVETASYEAGEEAGIKSVTLLIKGHNAFGYLRSEKG 181

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+D+  RRHTSF+S+ V P +D+S+ I+I  SD R+DT+R+SGAGGQH+N T
Sbjct: 182 VHRLVRISPFDAAGRRHTSFASVDVMPELDESVNIDIDPSDLRVDTFRSSGAGGQHINKT 241

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITHIPTG+V   Q ERSQ +N+  A NML++KLYELE +K+ +     E  + EI
Sbjct: 242 ESAVRITHIPTGIVTSSQAERSQLQNRVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLEI 301

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           GWG QIRSYV  PY +VKD R+  E  +   V+DGDLD F+ A L  K
Sbjct: 302 GWGSQIRSYVFHPYTLVKDNRSGHETHNGQAVMDGDLDPFINAYLQWK 349


>gi|325292702|ref|YP_004278566.1| peptide chain release factor 2 [Agrobacterium sp. H13-3]
 gi|325060555|gb|ADY64246.1| peptide chain release factor 2 [Agrobacterium sp. H13-3]
          Length = 342

 Score =  265 bits (678), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 229/328 (69%), Positives = 279/328 (85%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
           N K EDP LW +  EA+ LMRERQ LD++I+ +K ++ +L DN+ L+EL   E D  I++
Sbjct: 2   NNKAEDPTLWNDATEAQKLMRERQQLDDSINGVKALEQQLKDNVELIELGEMEGDDEIVK 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           +  D L+ ++ E   +Q E++LSGEADSND YLEVH+GAGGTESQDWANMLLRMYTRWA+
Sbjct: 62  DAEDALKALRSEANRRQVEAMLSGEADSNDTYLEVHSGAGGTESQDWANMLLRMYTRWAD 121

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           +  FK E LE+HDGEEAGIKSAT+L+KG NA+GWLK E GVHRLVRISPYDSN+RRHTSF
Sbjct: 122 REGFKVEVLEVHDGEEAGIKSATILVKGHNAFGWLKTESGVHRLVRISPYDSNARRHTSF 181

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           SS+WVYPVVDDSI+I+I+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+ V CQQE
Sbjct: 182 SSVWVYPVVDDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIAVACQQE 241

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQHKN+A+AW+MLRA+LYE+ELQKRE+ AN   +SKT+IGWG QIRSYVLQPYQ++KDL
Sbjct: 242 RSQHKNRAKAWDMLRARLYEVELQKREDAANAQAASKTDIGWGHQIRSYVLQPYQLIKDL 301

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           RT +E T+P +VLDGDL+ FM+A LA +
Sbjct: 302 RTGVESTAPGNVLDGDLNQFMEAALAHR 329


>gi|332983173|ref|YP_004464614.1| peptide chain release factor 2 (bRF-2) [Mahella australiensis 50-1
           BON]
 gi|332700851|gb|AEE97792.1| bacterial peptide chain release factor 2 (bRF-2) [Mahella
           australiensis 50-1 BON]
          Length = 353

 Score =  265 bits (678), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 168/341 (49%), Positives = 231/341 (67%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           LFD     + +  L  +  DP  W ++  ++ + +  + L + +  ++ ++ +  D   L
Sbjct: 6   LFDPAGMEEEIKNLEKQMADPSFWSDMERSQKVNQRIKALKDKLQNLRAVEQKWEDLRTL 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +L  EEDD SI+ E +  L  ++ EVE  + E+LLSG  D N+A + +HAGAGGTE+QD
Sbjct: 66  ADLGREEDDASIVGEVAAELASLRKEVERLRIETLLSGPYDRNNAIVTLHAGAGGTEAQD 125

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           W  ML RMYTRWAE + +K E L++ +G+EAGIKS T L++G NAYG+LK E+GVHRLVR
Sbjct: 126 WVQMLYRMYTRWAEDKGYKVEVLDLLEGDEAGIKSVTFLVEGENAYGYLKAEKGVHRLVR 185

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+D+  RRHTSF+S+ V P +DD   +EI+  D +IDTYR+SGAGGQHVN T+SA+RI
Sbjct: 186 ISPFDAAGRRHTSFASVDVMPELDDDEGVEINPEDLKIDTYRSSGAGGQHVNKTESAIRI 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           THIPTG+VVQCQ ERSQH NK  A  ML+AKL EL+ Q+ +   +  +     I WG QI
Sbjct: 246 THIPTGIVVQCQNERSQHSNKETAMKMLKAKLLELKEQEEQAKISDIKGELKRIEWGSQI 305

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           RSY+ QPY MVKD RTN E  + + V+DGD+D F+   L +
Sbjct: 306 RSYIFQPYTMVKDHRTNAEIGNVNAVMDGDIDLFISEYLKM 346


>gi|302872499|ref|YP_003841135.1| hypothetical protein COB47_1880 [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302575358|gb|ADL43149.1| hypothetical protein COB47_1880 [Caldicellulosiruptor obsidiansis
           OB47]
          Length = 372

 Score =  265 bits (678), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 169/349 (48%), Positives = 235/349 (67%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
              L  +    D D     L +L ++T +P  WQ++  ++ ++++ + L + I   +++ 
Sbjct: 15  EEDLKEMRVSLDIDRLQSELKWLESETSNPDFWQDLENSQKVLQKIKRLKDKIERFQKLC 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            +  D  +L EL++EE +  + +E    L  ++ ++E  + E LL+G  D N+A L +HA
Sbjct: 75  SQWEDLKVLTELSIEEGNHEMAEELEKELLDLEKKIEDFKIEVLLNGPYDKNNAILSIHA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDWA MLLRMYTRWA K+ +K E L+I  GEEAGIK+ T+ I G NAYG+LK 
Sbjct: 135 GAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTIRIVGENAYGYLKA 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+D+  RRHTSF+++ V P V+D  +IEI E D  IDT+RASGAGGQHV
Sbjct: 195 EKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTFRASGAGGQHV 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRI HIPTG+VV CQ ERSQHKN+  A  +L+AKL EL+ ++R E     +  +
Sbjct: 255 NKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQ 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           T+IGWG QIRSYV  PY +VKD RT  E  +   V+DG++D F+ A L 
Sbjct: 315 TDIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363


>gi|148270343|ref|YP_001244803.1| peptide chain release factor 2 [Thermotoga petrophila RKU-1]
 gi|166225119|sp|A5IM04|RF2_THEP1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|147735887|gb|ABQ47227.1| bacterial peptide chain release factor 2 (bRF-2) [Thermotoga
           petrophila RKU-1]
          Length = 367

 Score =  265 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 163/350 (46%), Positives = 233/350 (66%), Gaps = 2/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L ++   +  + + +   + +  +  K  DP +W +  +A+   ++ + L N    +K 
Sbjct: 12  ELEKKYKDILSVVNENEVDREIEEIEKKLTDPSVWDDQKKAREYTQKLKRLKNISEDLKR 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++    D  + +EL   ++D  + Q   + +Q ++  V+  + E +L+G+ D N+AYL V
Sbjct: 72  VRSLFEDLEVAIEL--SDEDQEMAQHVEEIVQELEGAVKKLELEIILNGKYDPNNAYLSV 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA MLLRMY RWAE++ F  E +E   GEEAGIK AT+LIKG  AYG+L
Sbjct: 130 HPGAGGTESQDWAQMLLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATILIKGEYAYGYL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+  RRHTSF+S+ V P +DD ++IEI   D +I+T+RASG GGQ
Sbjct: 190 KHESGVHRLVRISPFDAARRRHTSFASVNVIPEIDDDVDIEIRPEDLKIETFRASGHGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN T+SAVRITH+PTG+VV CQ ERSQH+NK  A  +L+AKLY+LE++K++      + 
Sbjct: 250 YVNKTESAVRITHLPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKQREIQEIQG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +I WG QIRSYV  PY MVKD RT +E  +   V+DGD+D F++A L
Sbjct: 310 ELKDISWGNQIRSYVFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAEL 359


>gi|167750196|ref|ZP_02422323.1| hypothetical protein EUBSIR_01170 [Eubacterium siraeum DSM 15702]
 gi|167656758|gb|EDS00888.1| hypothetical protein EUBSIR_01170 [Eubacterium siraeum DSM 15702]
 gi|291556130|emb|CBL33247.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium
           siraeum V10Sc8a]
          Length = 370

 Score =  265 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 166/347 (47%), Positives = 229/347 (65%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L  L G  D DN    +  L  ++  P  W +V  ++ + ++     N +   +++++  
Sbjct: 18  LKELAGALDLDNLKAEIVKLEEQSAQPDFWNDVENSQKISQKIGEDKNIVQSYEKLRESY 77

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D + +LELA EEDD S+L E  +  +  + E+E ++  +LLSGE D N+A L  HAGAG
Sbjct: 78  DDVMTMLELAQEEDDESMLPEIQELAKHFRTELESQKLATLLSGEFDHNNAILTFHAGAG 137

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW  ML RMY  WAE+   K   L+  DGEEAGIKSA++L++G NAYG+LK E G
Sbjct: 138 GTEAQDWVEMLYRMYNHWAEQHGMKVTVLDYLDGEEAGIKSASILVEGRNAYGYLKSENG 197

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR+SP+DS+ RRHTSF+S+ V P +++ I+IEISE + ++D YRASGAGGQ VN T
Sbjct: 198 VHRLVRVSPFDSSGRRHTSFASVEVMPEINEDIDIEISEDEIKMDVYRASGAGGQKVNKT 257

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVRITHIPTG+V  CQ ERSQH+N+  A  ML++KL E++ ++  +  +  +  + +I
Sbjct: 258 SSAVRITHIPTGIVCACQTERSQHQNREYAMRMLKSKLLEIKEREHLDKISDIKGEQLQI 317

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            WG QIRSYV  PY MVKD RT  E  +   V+DGDLD F+ A L  
Sbjct: 318 AWGAQIRSYVFMPYTMVKDHRTGYEMGNIGAVMDGDLDGFINAYLKA 364


>gi|152977397|ref|YP_001376914.1| peptide chain release factor 2 [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152026149|gb|ABS23919.1| peptide chain release factor 2 [Bacillus cytotoxicus NVH 391-98]
          Length = 327

 Score =  265 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 163/325 (50%), Positives = 217/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +   W +   A+ ++ E   L + +   +++ +   +  +  EL  EE D  + +E  
Sbjct: 1   MMEAGFWDDQQGAQTVINEANALKDMVGKFRQLDETFENLEVTHELLKEEYDKDLHEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR 
Sbjct: 61  SEVKSLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D +EIE+   D ++DTYRASGAGGQHVNTTDSAVRITHIPT  +V CQ ERSQ
Sbjct: 181 EVVPEFNDEVEIEVRTEDLKVDTYRASGAGGQHVNTTDSAVRITHIPTNTIVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+  A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DG++D F+ A L  +
Sbjct: 301 TEVGNVQAVMDGEIDPFIDAYLRSR 325


>gi|284989796|ref|YP_003408350.1| peptide chain release factor 2 [Geodermatophilus obscurus DSM
           43160]
 gi|284063041|gb|ADB73979.1| peptide chain release factor 2 [Geodermatophilus obscurus DSM
           43160]
          Length = 370

 Score =  265 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 150/354 (42%), Positives = 223/354 (62%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D D   + ++ L  +   P LW +V  A+ L  +  +L   +  ++E
Sbjct: 11  ELDTTLRSIEAVLDVDRLRREVAELEQQASAPDLWNDVEAAQALTSKLSYLQGDLRRVEE 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  +L E+A+EE D +   E    L  ++  ++  +  +LLSGE DS +A + +
Sbjct: 71  LRSRLDDVGLLHEMAVEESDEATAAEAERELASLRQAIDELEVRTLLSGEYDSREALVTI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            + AGG ++ D+A ML+RMY RWAE+ ++  E  ++   EEAGIKSAT  +K P AYG L
Sbjct: 131 RSEAGGVDAADFAEMLMRMYLRWAERHRYPVELYDVSYAEEAGIKSATFAVKQPYAYGTL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  ++I E++ RID +R+SG GGQ
Sbjct: 191 SVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHVDIPENEIRIDVFRSSGPGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTG+VV CQ E+SQ +N+A A  +L+A+L     +++    +    
Sbjct: 251 SVNTTDSAVRITHLPTGIVVSCQNEKSQIQNRAAAMRVLQARLLARRQEEQRAEMDALRG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +   WG Q+RSYVL PYQMVKDLRT  E  + S VLDGD+D F++A +  ++
Sbjct: 311 EGS--SWGNQMRSYVLHPYQMVKDLRTEQETGNTSAVLDGDIDPFIEAGIRWRR 362


>gi|293449213|ref|ZP_06663634.1| peptide chain release factor 2 [Escherichia coli B088]
 gi|332280425|ref|ZP_08392838.1| peptide chain release factor RF-2 [Shigella sp. D9]
 gi|291322303|gb|EFE61732.1| peptide chain release factor 2 [Escherichia coli B088]
 gi|332102777|gb|EGJ06123.1| peptide chain release factor RF-2 [Shigella sp. D9]
          Length = 332

 Score =  265 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 178/330 (53%), Positives = 226/330 (68%), Gaps = 1/330 (0%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             +N + E P +W     A+ L +ER  L+  +  + +++  L D   LLELA+E DD  
Sbjct: 2   EEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEADDEE 61

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
              E    L  ++ ++   +F  + SGE DS D YL++ AG+GGTE+QDWA+ML RMY R
Sbjct: 62  TFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLR 121

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           WAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+ E GVHRLVR SP+DS  RRH
Sbjct: 122 WAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRH 181

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPTG+V QC
Sbjct: 182 TSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQC 241

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           Q +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG QIRSYVL     +
Sbjct: 242 QNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDD-SRI 300

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 301 KDLRTGVETRNTQAVLDGSLDQFIEASLKA 330


>gi|170076819|ref|YP_001733457.1| peptide chain release factor 2 [Synechococcus sp. PCC 7002]
 gi|169884488|gb|ACA98201.1| peptide chain release factor 2 [Synechococcus sp. PCC 7002]
          Length = 359

 Score =  265 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 149/345 (43%), Positives = 221/345 (64%), Gaps = 1/345 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      ++  L  +   P  W++   A+ +++E   L   ++  ++ Q +  D  
Sbjct: 10  RTIFDLKTLDAKIFDLEQQAAQPEFWEDQQGAQDILQELTELKGTVAQYQQWQGQFEDAA 69

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            + EL  E +D ++L E  +NL  ++ E+   + + +LSGE D+  A L ++AGAGGT++
Sbjct: 70  AIAELLTEAEDPALLTEAMENLDDLQKELNRWELQQMLSGEYDNLGAVLTINAGAGGTDA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRW+EK+ +K    EI +G+EAG+KSATL + G  A+G+LK E+G HRL
Sbjct: 130 QDWAEMLLRMYTRWSEKQGYKVRLAEISEGDEAGLKSATLEVTGRYAFGYLKHEKGTHRL 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           VRISP+++N +R TSF+ + V P+  D++++++I E D  I T RA G GGQ+VN  ++A
Sbjct: 190 VRISPFNANGKRQTSFAGVEVMPILGDNAVKVDIPEKDLEITTSRAGGKGGQNVNKVETA 249

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRI H+PTGV V+C QERSQ +NK +A  +L+AKL  +  ++R +          E  WG
Sbjct: 250 VRIVHLPTGVAVRCTQERSQLQNKEKALAILKAKLLIIAQEQRAQEIAEIRGDMVEAAWG 309

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            QIR+YV  PYQMVKDLRTN E T    V+DGDLD F++A+L   
Sbjct: 310 NQIRNYVFHPYQMVKDLRTNHETTDVDGVMDGDLDAFIEASLRQD 354


>gi|291279507|ref|YP_003496342.1| peptide chain release factor RF-2 [Deferribacter desulfuricans
           SSM1]
 gi|290754209|dbj|BAI80586.1| peptide chain release factor RF-2 [Deferribacter desulfuricans
           SSM1]
          Length = 375

 Score =  265 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 180/354 (50%), Positives = 249/354 (70%), Gaps = 3/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTK-TEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           ++ + +     +   D   +++  ++    EDP  W N  E+K L++E+  L   +S  +
Sbjct: 14  EIDKSIESFKQVVKEDEINKKIEAIDKMSMEDPDFW-NKKESKQLLKEQASLKKFLSEWE 72

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           E+     D  +L+EL  E  +  + ++   NL  +K  V   + + +L+GE D N+A + 
Sbjct: 73  ELLTIREDIDVLIELFKEGSE-EVKEDIISNLNELKKRVSDFELKLILNGEHDINNAIVT 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +HAGAGGTE+ DW +ML RMYTRW E++K+K E L++  G+EAGIKS T  + G  +YG+
Sbjct: 132 IHAGAGGTEACDWVSMLFRMYTRWVERKKYKYEILDMLPGDEAGIKSITFNVIGEYSYGY 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LKGE GVHRLVRISP+DSN+RRHTSF+S++V P +DD I+IEI+ESD +I+T+RASGAGG
Sbjct: 192 LKGESGVHRLVRISPFDSNNRRHTSFASVFVLPEIDDEIDIEINESDLKIETFRASGAGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVNTTDSAVRITH+PTG+VV CQ ERSQHKNKA A  +L+A+LYE E++KR +     E
Sbjct: 252 QHVNTTDSAVRITHLPTGIVVSCQNERSQHKNKAHAMKILKARLYEYEMEKRNKEKEKLE 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           SSKTEIGWG QIRSYV+ PY+MVKDLRT  E  +   V+DGD+DDF+K  L ++
Sbjct: 312 SSKTEIGWGNQIRSYVMHPYKMVKDLRTRYETGNVDAVMDGDIDDFIKTYLLME 365


>gi|315149827|gb|EFT93843.1| peptide chain release factor 2 [Enterococcus faecalis TX0012]
          Length = 327

 Score =  265 bits (677), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 169/325 (52%), Positives = 217/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N   A+ L+ E   L        ++ + L +  ++ EL  EE D  I +E  
Sbjct: 1   MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  ++  +   +   LL+   D N+A +E+H GAGGTESQDW +MLLRMYTRWAE   
Sbjct: 61  ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+ E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+
Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEI I+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ
Sbjct: 181 DVMPELDDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA +ML+AKLY+LE++K+ + A      + EI WG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEISWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  +
Sbjct: 301 YETGNVQAVMDGDLDGFIDAYLKQR 325


>gi|147679087|ref|YP_001213302.1| protein chain release factor B [Pelotomaculum thermopropionicum SI]
 gi|146275184|dbj|BAF60933.1| protein chain release factor B [Pelotomaculum thermopropionicum SI]
          Length = 336

 Score =  265 bits (677), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 158/327 (48%), Positives = 215/327 (65%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  +  +P  W    +A+  ++    L + ++  + +   L D  +L EL  EE+D +  
Sbjct: 2   LERQMLEPGFWDGQEKAQKAVQRLSSLRDRVAVFQRLDKDLEDLEVLAELGEEEEDEAAA 61

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E    L  +  +V   +   LLSG  D  +A + +HAGAGGTE+QDW  MLLRMYTRWA
Sbjct: 62  AEVKQGLAVVAQKVAEMELTVLLSGPYDRGNAIVALHAGAGGTEAQDWVEMLLRMYTRWA 121

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+R FK E L++  G+EAG KSAT+ + GPNAYG+L+ E+GVHRLVRISP+D+  RRHTS
Sbjct: 122 ERRGFKVEVLDLLPGDEAGTKSATIEVIGPNAYGYLRSEKGVHRLVRISPFDAAGRRHTS 181

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P VDD ++++I+  D +IDT+R+ GAGGQHVN TDSAVRITH+PTG+VV CQ 
Sbjct: 182 FASVDVLPEVDDEVDVKINPDDLKIDTFRSGGAGGQHVNKTDSAVRITHLPTGIVVTCQN 241

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQ  N+  A  ML+A+L +LEL+K+E         + EI WG QIRSYV  PY +VKD
Sbjct: 242 ERSQLANRLAAMKMLKARLIDLELRKKEAELAALRGEQQEIAWGSQIRSYVFHPYSLVKD 301

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352
            RT  E  +   V+DG++D F+ A L 
Sbjct: 302 HRTGHETGNVGAVMDGEIDSFIAAYLR 328


>gi|300312096|ref|YP_003776188.1| peptide chain release factor 2 [Herbaspirillum seropedicae SmR1]
 gi|300074881|gb|ADJ64280.1| peptide chain release factor 2 (RF-2) protein [Herbaspirillum
           seropedicae SmR1]
          Length = 337

 Score =  265 bits (677), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 174/335 (51%), Positives = 240/335 (71%), Gaps = 1/335 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             ++L  +N + EDP++W +   A+ L +E++ L+  +  + +I   L D   L E+A E
Sbjct: 2   KSEKLEQVNAELEDPNVWNDQKRAQDLGKEKKSLEAIVHTLIKIDSELTDARDLFEMARE 61

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D   +     + + +K  VE  +F  + SG  D+N+ ++++ AGAGGTE+QDWA+MLL
Sbjct: 62  EKDEDTIIAIEGDAENLKKMVEEMEFRRMFSGPMDANNCFIDIQAGAGGTEAQDWASMLL 121

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           R Y R+ E++ FK E LE  DGE AGIK+AT+ ++G  AYG+L+ E GVHRLVR SP+DS
Sbjct: 122 RQYLRYCERKGFKAEILEQSDGEVAGIKTATIKVEGEYAYGFLRTETGVHRLVRKSPFDS 181

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           ++ RHTSFSS++VYP VD+S EIEI+ +D R+DTYRASGAGGQH+N TDSAVR+TH P+G
Sbjct: 182 SNGRHTSFSSLFVYPEVDESFEIEINPADVRVDTYRASGAGGQHINKTDSAVRLTHAPSG 241

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VVQCQ +RSQH+N+A+AW+MLRAKL+ELEL+KR       E SKT++GWG QIRSYVL 
Sbjct: 242 IVVQCQNDRSQHRNRAEAWDMLRAKLFELELRKRMSEQQKLEDSKTDVGWGHQIRSYVLD 301

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
               +KDLRTN E  +   VLDGD+DDF+ A+L  
Sbjct: 302 -QSRIKDLRTNFETGNTKAVLDGDIDDFIAASLKQ 335


>gi|30023221|ref|NP_834852.1| peptide chain release factor 2 [Bacillus cereus ATCC 14579]
 gi|29898781|gb|AAP12053.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bacillus cereus
           ATCC 14579]
          Length = 325

 Score =  265 bits (677), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 165/321 (51%), Positives = 215/321 (66%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
             W +   A+ ++ E   L + +   +++ +   +  I  EL  EE D  + +E    ++
Sbjct: 4   GFWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVK 63

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E
Sbjct: 64  GLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVE 123

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P
Sbjct: 124 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 183

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             +D +EIE+   D +IDTYRASGAGGQHVNTTDSAVRITH PT  VV CQ ERSQ KN+
Sbjct: 184 EFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNR 243

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
             A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN E  
Sbjct: 244 EHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 303

Query: 334 SPSDVLDGDLDDFMKATLAIK 354
           +   V+DG++D F+ A L  +
Sbjct: 304 NVQAVMDGEIDPFIDAYLRSR 324


>gi|229020397|ref|ZP_04177152.1| Peptide chain release factor 2 [Bacillus cereus AH1273]
 gi|229026626|ref|ZP_04182968.1| Peptide chain release factor 2 [Bacillus cereus AH1272]
 gi|228734659|gb|EEL85311.1| Peptide chain release factor 2 [Bacillus cereus AH1272]
 gi|228740876|gb|EEL91119.1| Peptide chain release factor 2 [Bacillus cereus AH1273]
          Length = 326

 Score =  265 bits (677), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 163/325 (50%), Positives = 215/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
                 W +   A+ ++ E   L + +   +++ +   +  +  EL  EE D  + +E  
Sbjct: 1   MMSAGFWDDQQGAQTVINEANALKDMVGSFRQLDETFENLEMTHELLKEEYDEDLHEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR 
Sbjct: 61  SEVKTLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D +EIE+   D +IDTYRASGAGGQH+NTTDSAVRITH PT  VV CQ ERSQ
Sbjct: 181 EVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+  A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DG++D F+ A L  +
Sbjct: 301 TEVGNVQAVMDGEIDPFIDAYLRSR 325


>gi|255926563|gb|ABG86573.2| peptide chain release factor 2 [Clostridium perfringens SM101]
          Length = 364

 Score =  265 bits (677), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 154/350 (44%), Positives = 227/350 (64%), Gaps = 1/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +G      +  ++ + L  K ++   W +V +A+ + +E + + + I   K 
Sbjct: 14  ELKNNLKEMGASLCLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKN 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + +R+ D  +L EL  E D+ +  +     ++ +  E++  + E++LSGE D N+A L +
Sbjct: 74  LNERIDDVEVLKELMEENDEETAKE-IISEVKALSKEIDTLKIETILSGEYDRNNAILTL 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H G GG+++ DW  MLLRMYTRW EK+ +  E ++   G+EAG+KS TL +KG  AYG+L
Sbjct: 133 HTGVGGSDANDWTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+G+HRLVRISP+++N +R TSF+S+ V P +    +IEI+  D RIDTYRA GAGGQ
Sbjct: 193 KAEKGIHRLVRISPFNANGKRQTSFASVEVLPELTSDQDIEINPVDLRIDTYRAGGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+VVQCQ ERSQ  N+  A  ML++KL EL+ +  +E       
Sbjct: 253 HVNKTESAVRITHIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              ++GWG QIRSYV  PY MVKD RTN+E ++ + V+ GD+D+F+ A L
Sbjct: 313 ELKDMGWGSQIRSYVFHPYSMVKDHRTNVETSNVNGVMGGDIDNFIIAYL 362


>gi|299821880|ref|ZP_07053768.1| peptide chain release factor RF2 [Listeria grayi DSM 20601]
 gi|299817545|gb|EFI84781.1| peptide chain release factor RF2 [Listeria grayi DSM 20601]
          Length = 338

 Score =  265 bits (677), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 167/336 (49%), Positives = 228/336 (67%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              R++ L  +  DP  W +   A+ ++ E   L +      +++++  +  + LEL  E
Sbjct: 1   MEARIAELEDQMLDPSFWNDQQGAQTVINEANGLKDTYQAFHQLEEQQENLEVSLELLRE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D  + ++  + LQ    E++  + + +LS   D N+A LE+H GAGGTESQDW +MLL
Sbjct: 61  ELDADLKEQVEEELQTFVRELKDFELKMILSEPYDKNNAILEIHPGAGGTESQDWGSMLL 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY R+A+K+ FK E L+   G+EAGIKS TLLIKG NAYG+LK E+G+HRLVRISP+DS
Sbjct: 121 RMYQRFADKKGFKVEMLDYQAGDEAGIKSVTLLIKGLNAYGYLKAEKGIHRLVRISPFDS 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           + RRHTSF S+ V P ++D IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+TH+PTG
Sbjct: 181 SGRRHTSFVSVDVMPELNDDIEIEVRPEDLKIDTYRATGAGGQHINTTDSAVRMTHLPTG 240

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV CQ ERSQ KN+ QA  ML+ KLY+ E +++E+        + EIGWG QIRSYV  
Sbjct: 241 IVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKEQELAAIRGEQKEIGWGSQIRSYVFH 300

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RT +E  +   V+DG++DDF+ A L  K
Sbjct: 301 PYSMVKDHRTEVETGNTQAVMDGEIDDFINAYLRSK 336


>gi|40063231|gb|AAR38058.1| peptide chain release factor 2 [uncultured marine bacterium 577]
          Length = 359

 Score =  265 bits (677), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 171/346 (49%), Positives = 245/346 (70%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD+D   +R   ++   EDP +W++   A+ L RE++ LD  +  ++ I+ +L 
Sbjct: 13  QSFGGIFDFDAKKERSDEISFLEEDPEIWKDSKRAQELGREKKILDKIVLTLETIKLQLQ 72

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D++ L ++A EE+D  +L+    +  +++  V   +F ++ S   D N+ +LE+ +G+GG
Sbjct: 73  DSIDLFQMAKEENDIVVLESIRADAAKLETNVANMEFCNMFSNPMDPNNCFLEIQSGSGG 132

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDWA ML RMY R+ E+R +K E LE   GE AGIKSA+L I G  AYG+L+ E G+
Sbjct: 133 TEAQDWAAMLERMYLRYCERRDYKVEVLEESSGEVAGIKSASLKISGDYAYGYLRTESGI 192

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS SRRHTSF+S+++YP VDD+IEIEI+ +D R+DTYRASGAGGQH+N TD
Sbjct: 193 HRLVRKSPFDSGSRRHTSFASVFIYPEVDDTIEIEINPADLRVDTYRASGAGGQHINKTD 252

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SA+RITH P+G+VV CQ +RSQH+N+A+A  ML+++LYE+EL+K+ +     E SKT+IG
Sbjct: 253 SAIRITHNPSGIVVSCQNDRSQHRNRAEAMAMLKSRLYEVELRKQSDEKQAMEDSKTDIG 312

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSYVL     +KDLRT +E  +   VLDG LD+F+K +L  
Sbjct: 313 WGHQIRSYVLD-QSRIKDLRTGLEIGNTQGVLDGGLDEFIKTSLKQ 357


>gi|47567398|ref|ZP_00238111.1| peptide chain release factor 2 [Bacillus cereus G9241]
 gi|47568468|ref|ZP_00239168.1| peptide chain release factor 2 [Bacillus cereus G9241]
 gi|47569292|ref|ZP_00239977.1| peptide chain release factor 2 [Bacillus cereus G9241]
 gi|222098640|ref|YP_002532698.1| peptide chain release factor 2 [Bacillus cereus Q1]
 gi|228936472|ref|ZP_04099270.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228988409|ref|ZP_04148500.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229141914|ref|ZP_04270440.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST26]
 gi|229158750|ref|ZP_04286808.1| Peptide chain release factor 2 [Bacillus cereus ATCC 4342]
 gi|47554063|gb|EAL12429.1| peptide chain release factor 2 [Bacillus cereus G9241]
 gi|47554859|gb|EAL13210.1| peptide chain release factor 2 [Bacillus cereus G9241]
 gi|47556019|gb|EAL14357.1| peptide chain release factor 2 [Bacillus cereus G9241]
 gi|221242699|gb|ACM15409.1| peptide chain release factor [Bacillus cereus Q1]
 gi|228624734|gb|EEK81503.1| Peptide chain release factor 2 [Bacillus cereus ATCC 4342]
 gi|228641529|gb|EEK97834.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST26]
 gi|228771265|gb|EEM19740.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228823304|gb|EEM69138.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 326

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 166/325 (51%), Positives = 215/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
                 W +   A+ ++ E   L + +   +++ +   +  I  EL  EE D  + +E  
Sbjct: 1   MMGAGFWDDQQGAQAVINEANALKDMVGSFRQLDETFENLEITHELLKEEYDEDLHEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR 
Sbjct: 61  SEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D +EIEI   D +IDTYRASGAGGQHVNTTDSAVRITH PT  VV CQ ERSQ
Sbjct: 181 EVVPEFNDEVEIEIRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+  A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DG++D F+ A L  +
Sbjct: 301 TEVGNVQAVMDGEIDPFIDAYLRSR 325


>gi|315194373|gb|EFU24765.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           CGS00]
          Length = 330

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 159/325 (48%), Positives = 215/325 (66%), Gaps = 1/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P+ W N  +A+ ++ +   L   ++  K +Q  + D     +L  EE D  + ++  
Sbjct: 1   MAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDGEMKEDLE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             +   K +V+  + + LL G  D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ 
Sbjct: 61  QEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S 
Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180

Query: 210 WVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
            V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH P+G+VV  Q ERS
Sbjct: 181 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q KN+  A  ML++KLY+L+L+++          + EIGWG QIRSYV  PY MVKD RT
Sbjct: 241 QIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353
           N E      V+DGD+  F+++ L  
Sbjct: 301 NEETGKVDAVMDGDIGPFIESYLRQ 325


>gi|302391071|ref|YP_003826891.1| bacterial peptide chain release factor 2 (bRF-2) [Acetohalobium
           arabaticum DSM 5501]
 gi|302203148|gb|ADL11826.1| bacterial peptide chain release factor 2 (bRF-2) [Acetohalobium
           arabaticum DSM 5501]
          Length = 366

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 169/353 (47%), Positives = 237/353 (67%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L  L    D+D   ++   L  +   P  W +   A+ + +E   L + +     +
Sbjct: 12  LKGELAELRVSLDYDKLEEKHDQLRAEMSKPGFWDDSSRAQQISKEASALKDMMESFDRL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++RL +  +L+EL  EEDD S+ +E  D LQ ++ ++E  + + ++ GE D N A L ++
Sbjct: 72  EERLEEIEVLIELGQEEDDDSVTEEIKDKLQGLEEDIEELELKVVMDGEYDQNSALLSIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGG +SQDWA MLLRMY RWAEK+ ++ E LE   GEEAGIKS TL I GP AYG+LK
Sbjct: 132 PGAGGIDSQDWAEMLLRMYNRWAEKKDYQIETLEFMAGEEAGIKSVTLQINGPYAYGYLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHR+VR+SP+DS+ RRHTSF+S+ V P ++D I+I+I ++D +I+TYRASGAGGQH
Sbjct: 192 AEKGVHRMVRVSPFDSSGRRHTSFASVEVLPEIEDDIDIDIEKNDLKIETYRASGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH PTG+VVQCQ  RSQHKN+ +A  +L+AKL++   +K+ E  +     
Sbjct: 252 VNTTDSAVRITHQPTGIVVQCQSLRSQHKNRQKAMQILKAKLFDYMKEKQAEKLSEIRGE 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K +I WG QIRSY   PYQ++KD RTN+E  +   V+DG+LD  ++A L   K
Sbjct: 312 KKDISWGSQIRSYFFDPYQLIKDHRTNLEINNIEAVMDGELDPLIEAYLKETK 364


>gi|257424874|ref|ZP_05601301.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427542|ref|ZP_05603941.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430173|ref|ZP_05606557.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257432874|ref|ZP_05609234.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257435778|ref|ZP_05611826.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           M876]
 gi|282913594|ref|ZP_06321383.1| peptide chain release factor 2, programmed [Staphylococcus aureus
           subsp. aureus M899]
 gi|282918547|ref|ZP_06326284.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           C427]
 gi|282923513|ref|ZP_06331193.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           C101]
 gi|283957586|ref|ZP_06375039.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293500640|ref|ZP_06666491.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293509587|ref|ZP_06668298.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           M809]
 gi|293524173|ref|ZP_06670860.1| peptide chain release factor 2, programmed [Staphylococcus aureus
           subsp. aureus M1015]
 gi|297590314|ref|ZP_06948953.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus MN8]
 gi|257272444|gb|EEV04567.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275735|gb|EEV07208.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257279370|gb|EEV09971.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257282289|gb|EEV12424.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284969|gb|EEV15088.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           M876]
 gi|282314381|gb|EFB44771.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           C101]
 gi|282317681|gb|EFB48053.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           C427]
 gi|282322626|gb|EFB52948.1| peptide chain release factor 2, programmed [Staphylococcus aureus
           subsp. aureus M899]
 gi|283791037|gb|EFC29852.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290921136|gb|EFD98197.1| peptide chain release factor 2, programmed [Staphylococcus aureus
           subsp. aureus M1015]
 gi|291095645|gb|EFE25906.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291467684|gb|EFF10199.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           M809]
 gi|297576613|gb|EFH95328.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus MN8]
 gi|312438819|gb|ADQ77890.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus TCH60]
          Length = 331

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 159/326 (48%), Positives = 215/326 (65%), Gaps = 1/326 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              +P+ W N  +A+ ++ +   L   ++  K +Q  + D     +L  EE D  + ++ 
Sbjct: 1   MMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDGEMKEDL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              +   K +V+  + + LL G  D+N+A LE+H GAGGTESQDWANML RMY R+ EK+
Sbjct: 61  EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKK 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S
Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180

Query: 209 IWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
             V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH P+G+VV  Q ER
Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNER 240

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KN+  A  ML++KLY+L+L+++          + EIGWG QIRSYV  PY MVKD R
Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAI 353
           TN E      V+DGD+  F+++ L  
Sbjct: 301 TNEETGKVDAVMDGDIGPFIESYLRQ 326


>gi|49478907|ref|YP_039176.1| peptide chain release factor 2 [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|52140380|ref|YP_086452.1| peptide chain release factor 2 [Bacillus cereus E33L]
 gi|118480225|ref|YP_897376.1| peptide chain release factor 2 [Bacillus thuringiensis str. Al
           Hakam]
 gi|228923910|ref|ZP_04087187.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228930187|ref|ZP_04093196.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228948905|ref|ZP_04111178.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228955423|ref|ZP_04117428.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228961413|ref|ZP_04123027.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|229050846|ref|ZP_04194398.1| Peptide chain release factor 2 [Bacillus cereus AH676]
 gi|229072632|ref|ZP_04205834.1| Peptide chain release factor 2 [Bacillus cereus F65185]
 gi|229082391|ref|ZP_04214854.1| Peptide chain release factor 2 [Bacillus cereus Rock4-2]
 gi|229094280|ref|ZP_04225356.1| Peptide chain release factor 2 [Bacillus cereus Rock3-42]
 gi|229112593|ref|ZP_04242130.1| Peptide chain release factor 2 [Bacillus cereus Rock1-15]
 gi|229124692|ref|ZP_04253873.1| Peptide chain release factor 2 [Bacillus cereus 95/8201]
 gi|229130431|ref|ZP_04259388.1| Peptide chain release factor 2 [Bacillus cereus BDRD-Cer4]
 gi|229147710|ref|ZP_04276053.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST24]
 gi|229153340|ref|ZP_04281518.1| Peptide chain release factor 2 [Bacillus cereus m1550]
 gi|229181440|ref|ZP_04308768.1| Peptide chain release factor 2 [Bacillus cereus 172560W]
 gi|229187396|ref|ZP_04314539.1| Peptide chain release factor 2 [Bacillus cereus BGSC 6E1]
 gi|229193426|ref|ZP_04320374.1| Peptide chain release factor 2 [Bacillus cereus ATCC 10876]
 gi|229199302|ref|ZP_04325969.1| Peptide chain release factor 2 [Bacillus cereus m1293]
 gi|296505600|ref|YP_003667300.1| peptide chain release factor 2 [Bacillus thuringiensis BMB171]
 gi|301056649|ref|YP_003794860.1| peptide chain release factor 2 [Bacillus anthracis CI]
 gi|49330463|gb|AAT61109.1| peptide chain release factor [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51973849|gb|AAU15399.1| peptide chain release factor 2 (RF-2) [Bacillus cereus E33L]
 gi|118419450|gb|ABK87869.1| bacterial peptide chain release factor 2 (bRF-2) [Bacillus
           thuringiensis str. Al Hakam]
 gi|228584162|gb|EEK42313.1| Peptide chain release factor 2 [Bacillus cereus m1293]
 gi|228590081|gb|EEK47952.1| Peptide chain release factor 2 [Bacillus cereus ATCC 10876]
 gi|228596100|gb|EEK53777.1| Peptide chain release factor 2 [Bacillus cereus BGSC 6E1]
 gi|228602015|gb|EEK59508.1| Peptide chain release factor 2 [Bacillus cereus 172560W]
 gi|228629944|gb|EEK86595.1| Peptide chain release factor 2 [Bacillus cereus m1550]
 gi|228635723|gb|EEK92210.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST24]
 gi|228653026|gb|EEL08907.1| Peptide chain release factor 2 [Bacillus cereus BDRD-Cer4]
 gi|228658787|gb|EEL14446.1| Peptide chain release factor 2 [Bacillus cereus 95/8201]
 gi|228670973|gb|EEL26280.1| Peptide chain release factor 2 [Bacillus cereus Rock1-15]
 gi|228689133|gb|EEL42956.1| Peptide chain release factor 2 [Bacillus cereus Rock3-42]
 gi|228700823|gb|EEL53346.1| Peptide chain release factor 2 [Bacillus cereus Rock4-2]
 gi|228710608|gb|EEL62581.1| Peptide chain release factor 2 [Bacillus cereus F65185]
 gi|228722502|gb|EEL73895.1| Peptide chain release factor 2 [Bacillus cereus AH676]
 gi|228798298|gb|EEM45297.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228804215|gb|EEM50829.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228810661|gb|EEM57009.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228829472|gb|EEM75100.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228835709|gb|EEM81073.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|296326652|gb|ADH09580.1| peptide chain release factor 2 [Bacillus thuringiensis BMB171]
 gi|300378818|gb|ADK07722.1| peptide chain release factor 2 [Bacillus cereus biovar anthracis
           str. CI]
          Length = 326

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 165/325 (50%), Positives = 215/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
                 W +   A+ ++ E   L + +   +++ +   +  I  EL  EE D  + +E  
Sbjct: 1   MMGAGFWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHELLKEEYDEDLHEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR 
Sbjct: 61  SEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D +EIE+   D +IDTYRASGAGGQHVNTTDSAVRITH PT  VV CQ ERSQ
Sbjct: 181 EVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+  A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DG++D F+ A L  +
Sbjct: 301 TEVGNVQAVMDGEIDPFIDAYLRSR 325


>gi|167628822|ref|YP_001679321.1| peptide chain release factor 2 [Heliobacterium modesticaldum Ice1]
 gi|167591562|gb|ABZ83310.1| peptide chain release factor 2 [Heliobacterium modesticaldum Ice1]
          Length = 333

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 166/325 (51%), Positives = 219/325 (67%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
             ++P  W +   A+  M+E   L + +   ++++ +  D  +L EL  EE+D  IL E 
Sbjct: 1   MIQEPGFWDDTERAQKTMQELTGLKDKVKAYRDLRSQWEDLCVLRELGAEENDAEILAEI 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              +Q I  E++    E LL+G  D N+A L +HAGAGGTE+ DW  MLLRMY RW EKR
Sbjct: 61  EAGIQTITAELDRWHLELLLNGPYDRNNALLTLHAGAGGTEAMDWNEMLLRMYIRWGEKR 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +K E L+   G+EAGIKSATL + G NAYG+LKGE GVHRLVRISP+DS+ RRHTSF+S
Sbjct: 121 GYKVELLDSLPGDEAGIKSATLSVVGENAYGYLKGEMGVHRLVRISPFDSSGRRHTSFAS 180

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P V D  EI+I   D ++DT+RA GAGGQHVN T+SAVRITHIPTG+VV CQ ERS
Sbjct: 181 LEVLPEVSDGAEIQIRPEDLKVDTFRAGGAGGQHVNKTESAVRITHIPTGIVVACQSERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q +N+A A  ML+AKL+E + Q++E   N  +  + +I +G QIRSYV  PY +VKD RT
Sbjct: 241 QIQNRATAMRMLQAKLFERQRQEQEAEVNRLKGDQQDIAFGSQIRSYVFHPYNLVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353
           N E  +   V+DG+LD+F+ A L  
Sbjct: 301 NTEVGNVHAVMDGELDEFISAYLVW 325


>gi|12642654|gb|AAK00335.1|AF320250_8 RF2 [Lactobacillus delbrueckii]
          Length = 371

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 166/348 (47%), Positives = 214/348 (61%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L   GGLFD+DN  + +     K  +P  W N  +A+ L+ E   L         ++  L
Sbjct: 17  LTTSGGLFDFDNISESIEINEAKMAEPGFWDNQEKAQKLISETNLLKEKRDSFLALKKDL 76

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D    LEL   E D  + ++T D L +++ E    +   LLSGE D ++A +E+H GAG
Sbjct: 77  TDEETALELLRLEADADLQKDTEDQLAKLQEEFHQYELNLLLSGEYDDHNALMEIHPGAG 136

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+ DW NMLLRMY R+ + R  K E      G+EAG+KS ++ I G NAYG LK E G
Sbjct: 137 GTEAMDWGNMLLRMYQRYCDSRGLKFEVNNFEPGDEAGLKSVSVRISGKNAYGLLKSEHG 196

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+DS  RRHTSF+S+ V P VDDSIEI+I   D RID YR+SGAGGQH+N T
Sbjct: 197 VHRLVRISPFDSAKRRHTSFASVEVIPEVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKT 256

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVRITHIPTG+V   Q +RSQ +N+  A N +RAKL+ LE +K+ +     +  + +I
Sbjct: 257 SSAVRITHIPTGIVTTSQAQRSQFQNRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQLDI 316

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            WG QIRSYV  PY MVKD RT  E      V+DG LD F+ A L  +
Sbjct: 317 AWGSQIRSYVFHPYSMVKDHRTGYETADVGGVMDGKLDPFIYAYLQWR 364


>gi|312135785|ref|YP_004003123.1| hypothetical protein Calow_1789 [Caldicellulosiruptor owensensis
           OL]
 gi|311775836|gb|ADQ05323.1| hypothetical protein Calow_1789 [Caldicellulosiruptor owensensis
           OL]
          Length = 372

 Score =  265 bits (676), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 171/349 (48%), Positives = 235/349 (67%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
              L  +    D D     L +L ++T +P  WQ++  ++ ++++ + L + I   +++ 
Sbjct: 15  EEDLKEMRVSLDIDRLENELKWLESETSNPDFWQDLENSQKVLQKIKRLKDKIERFQKLY 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            +  D  +L EL+LEE +  + +E    L  ++ ++E  + E LL+G  D N+A L +HA
Sbjct: 75  SQWEDLKVLTELSLEEGNHDMAEELEKELLDLERKIEDFKIEVLLNGPYDKNNAILSIHA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDWA MLLRMYTRWA K+ +K E L+I  GEEAGIK+ T+ I G NAYG+LK 
Sbjct: 135 GAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTVRIVGENAYGYLKA 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+D+  RRHTSF+++ V P V+D  +IEI E D  IDT+RASGAGGQHV
Sbjct: 195 EKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTFRASGAGGQHV 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRI HIPTG+VV CQ ERSQHKN+  A  +L+AKL EL+ ++R E     +  +
Sbjct: 255 NKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQ 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           TEIGWG QIRSYV  PY +VKD RT  E  +   V+DG++D F+ A L 
Sbjct: 315 TEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363


>gi|221633612|ref|YP_002522838.1| peptide chain release factor 2, programmed frameshift
           [Thermomicrobium roseum DSM 5159]
 gi|254790922|sp|B9L0E3|RF2_THERP RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|221155396|gb|ACM04523.1| peptide chain release factor 2, programmed frameshift
           [Thermomicrobium roseum DSM 5159]
          Length = 374

 Score =  265 bits (676), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 155/350 (44%), Positives = 223/350 (63%), Gaps = 2/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +L+ +G      +  Q++  L  +  DP LWQ+   A+ L+R    L + +   + 
Sbjct: 11  ELVERLDRIGVRLCLPSKRQQIEQLEHEAADPDLWQDPQRAQSLLRRLSQLRDLVQEWET 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  +  D L L  L    DD  +  +       +   V   +   LL+G+ D +DA L V
Sbjct: 71  LSQQARDLLELRAL--ASDDLELAGQVEQEATELAERVRQLELRLLLTGQYDGHDAILAV 128

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAG GG ++QDWA MLLRMY RWA++  F  E +++ +GEEAGIKSAT+ ++GP AYG+L
Sbjct: 129 HAGTGGVDAQDWAEMLLRMYLRWAQRAGFAAEVVDLLEGEEAGIKSATVEVRGPYAYGYL 188

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE G HRLVR+SP+D+  RRHTSF+ + V P+V++  ++EI E D RIDT+RASG GGQ
Sbjct: 189 KGEAGTHRLVRLSPFDAAHRRHTSFALVEVLPLVEEDDDVEIREEDIRIDTFRASGHGGQ 248

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITH+PTG+VV CQ ERSQ +N+  A  +L+A+L EL++++R+E     + 
Sbjct: 249 HVNKTESAVRITHLPTGIVVTCQNERSQIQNRETAMKILKARLLELKIRQRQEEQARLKG 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                GWG +IRSYVL PY MV D RT +   +   VL+G++D F++A L
Sbjct: 309 KPVVTGWGNRIRSYVLHPYTMVTDHRTEVSTPNIQAVLEGEIDPFIEAYL 358


>gi|262049538|ref|ZP_06022408.1| peptide chain release factor 2 [Staphylococcus aureus D30]
 gi|259162374|gb|EEW46946.1| peptide chain release factor 2 [Staphylococcus aureus D30]
          Length = 330

 Score =  265 bits (676), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 159/325 (48%), Positives = 214/325 (65%), Gaps = 1/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P+ W N  +A+ ++ +   L   ++  K +Q  + D     +L  EE D  + +   
Sbjct: 1   MAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEYLE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             +   K +V+  + + LL G  D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ 
Sbjct: 61  QEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S 
Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180

Query: 210 WVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
            V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH P+G+VV  Q ERS
Sbjct: 181 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q KN+  A  ML++KLY+L+L+++          + EIGWG QIRSYV  PY MVKD RT
Sbjct: 241 QIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353
           N E      V+DGD+  F+++ L  
Sbjct: 301 NEETGKVDAVMDGDIGPFIESYLRQ 325


>gi|317497043|ref|ZP_07955371.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316895703|gb|EFV17857.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 333

 Score =  265 bits (676), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 172/325 (52%), Positives = 227/325 (69%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E+P  W NV E++ +M+E + L   +    +++ +  D   L+++A E++D  +++E +
Sbjct: 1   MEEPGFWDNVEESQNVMKEVKSLKGVVEEYDDLKTKYEDIETLIDMAEEDEDADLIEEAT 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             +   +   E  +  +LL+GE D +DA L +HAGAGGTES DWA ML RM+TRWA K+ 
Sbjct: 61  ALMDEFEKTYEELRISTLLTGEYDKDDAILTLHAGAGGTESCDWAGMLYRMFTRWAGKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           + TE L+  DG+EAGIKS T+ I G NAYG+L+ E+GVHRLVRISP+++  +R TSF+S 
Sbjct: 121 YGTEVLDYLDGDEAGIKSVTVKITGMNAYGYLRSEKGVHRLVRISPFNAAGKRQTSFASC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + D IE+EI++ D RIDTYRASGAGGQH+N TDSA+RITH+PTG+VVQCQ ERSQ
Sbjct: 181 DVMPDIKDDIEVEIADEDIRIDTYRASGAGGQHINKTDSAIRITHLPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           HKNK QA  ML+ KLY L+ Q+  E  +       + GWG QIRSYVLQPY MVKD RTN
Sbjct: 241 HKNKDQAMKMLKTKLYLLKQQQHLEKLSDIRGDVGDNGWGNQIRSYVLQPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +PS VLDGDLD FM A LA  
Sbjct: 301 FESGNPSAVLDGDLDGFMNAYLAWD 325


>gi|229087663|ref|ZP_04219789.1| Peptide chain release factor 2 [Bacillus cereus Rock3-44]
 gi|228695624|gb|EEL48483.1| Peptide chain release factor 2 [Bacillus cereus Rock3-44]
          Length = 327

 Score =  265 bits (676), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 164/325 (50%), Positives = 215/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
                 W +   A+ ++ E   L + +   +++ +   +  +  EL  EE D  + +E  
Sbjct: 1   MMGAGFWDDQQGAQTVINEANALKDMVGKFRQLDETFENLEVTHELLKEEYDEDLHEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR 
Sbjct: 61  SEVKSLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D +EIE+   D +IDTYRASGAGGQHVNTTDSAVRITH PT  VV CQ ERSQ
Sbjct: 181 EVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+  A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DG++D F+ A L  +
Sbjct: 301 TEVGNVQAVMDGEIDPFIDAYLRSR 325


>gi|322389911|ref|ZP_08063451.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC
           903]
 gi|321143347|gb|EFX38785.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC
           903]
          Length = 336

 Score =  265 bits (676), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 148/336 (44%), Positives = 206/336 (61%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L  K  +P  W + I A+   +E   L        ++ D   ++ ILL+   E
Sbjct: 1   MEEEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMVDLFDESEILLDFLAE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +D                  +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLL
Sbjct: 61  DDSVKEELIEKLEELD--KRMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLL 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTR+     FK E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS
Sbjct: 119 RMYTRFGNAHGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSF+S+ V P +D++IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG
Sbjct: 179 AKRRHTSFTSVEVMPELDNTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY+LE +K+    +  +  K EI WG QIRSYV  
Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN E      V+DGD+D F+ A L  +
Sbjct: 299 PYTMVKDHRTNYEVAQVDKVMDGDIDGFIDAYLKWR 334


>gi|65317159|ref|ZP_00390118.1| COG1186: Protein chain release factor B [Bacillus anthracis str.
           A2012]
          Length = 325

 Score =  265 bits (676), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 165/321 (51%), Positives = 214/321 (66%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
             W +   A+ ++ E   L + +   +++ +   +  I  EL  EE D  + +E    ++
Sbjct: 4   GFWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVK 63

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            +  E+   + + LLS   D N A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E
Sbjct: 64  GLIQEMNEYELQLLLSDPYDKNKAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVE 123

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P
Sbjct: 124 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 183

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             +D +EIE+   D +IDTYRASGAGGQHVNTTDSAVRITH PT  VV CQ ERSQ KN+
Sbjct: 184 EFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNR 243

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
             A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN E  
Sbjct: 244 EHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 303

Query: 334 SPSDVLDGDLDDFMKATLAIK 354
           +   V+DG++D F+ A L  +
Sbjct: 304 NVQAVMDGEIDPFIDAYLRSR 324


>gi|73663271|ref|YP_302052.1| peptide chain release factor 2 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72495786|dbj|BAE19107.1| peptide chain release factor 2 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 334

 Score =  265 bits (676), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 156/326 (47%), Positives = 219/326 (67%), Gaps = 1/326 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W N  +A+ ++ +   L + ++  + ++  L D      L LEEDD ++ Q+  
Sbjct: 1   MTDPTFWDNQEKAQDVIDKNNALKSVVNAYRTLESELEDMDTTRALLLEEDDETMKQDLE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            ++Q  K E++  + + LL G  D+N+A +E+H GAGGTESQDW NMLLRMY R+ E++ 
Sbjct: 61  QSVQDFKNELDQFELQLLLDGPYDANNAIMELHPGAGGTESQDWTNMLLRMYQRYCEQKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E  +   G+EAG+KS TL++KG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S 
Sbjct: 121 FNVEIADYLPGDEAGVKSVTLIVKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180

Query: 210 WVYPVVDD-SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
            V P  ++  IEI+I+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ERS
Sbjct: 181 DVIPQFNNTEIEIDINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q KN+  A   L++KLY+L+++++E+        + EIGWG QIRSYV  PY MVKD RT
Sbjct: 241 QIKNREAAMKTLKSKLYQLKIEEQEQEMAEIRGEQKEIGWGSQIRSYVFHPYAMVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
           N E      V+DGD+  F++A L  +
Sbjct: 301 NEETGKVDAVMDGDIGPFIEAFLRSQ 326


>gi|15639564|ref|NP_219014.1| peptide chain release factor 2 (prfB) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189025803|ref|YP_001933575.1| peptide chain release factor 2 [Treponema pallidum subsp. pallidum
           SS14]
 gi|6093958|sp|O83585|RF2_TREPA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|3322871|gb|AAC65552.1| peptide chain release factor 2 (prfB) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189018378|gb|ACD70996.1| peptide chain release factor 2 [Treponema pallidum subsp. pallidum
           SS14]
 gi|291059953|gb|ADD72688.1| peptide chain release factor 2 [Treponema pallidum subsp. pallidum
           str. Chicago]
          Length = 368

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 162/348 (46%), Positives = 215/348 (61%), Gaps = 1/348 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
            R     GG+FD      R++ L      P  W     A+ L+ E + L   +   + ++
Sbjct: 9   RRACRKYGGVFDVAAYEARIATLEAAAAAPDFWSERARAEALLAELKTLRATLEPWRALR 68

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
               D   L ELA E  D S+  E S     I    E      LL  E D  DA++ +H+
Sbjct: 69  RESADLRALYELAREAQDASLEPELSSLFSDISARFEEASLTRLLHEEVDRLDAFVTIHS 128

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGG E+ DWA ML+RMYTRWAE+R F    +++ + E  G+KS TL I G +A+G+LKG
Sbjct: 129 GAGGVEACDWAQMLMRMYTRWAERRSFCVHIVDLLESE-GGVKSVTLKICGSHAFGFLKG 187

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVRISP+DS +RRHTSF+S +V+PV+DD +E+ I   D R+DTYR+ GAGGQHV
Sbjct: 188 ETGVHRLVRISPFDSAARRHTSFTSTYVFPVLDDHVEVHIRSEDMRVDTYRSGGAGGQHV 247

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N TDSAVRITH+PTG+VV CQ ERSQ  N+A A ++LRA+LY  E QK+++      S K
Sbjct: 248 NKTDSAVRITHLPTGIVVTCQNERSQISNRATALSLLRARLYAYERQKKQQEHQRFASEK 307

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +I WG QIRSYV  PY MVKD R+  E  +   V+DG L+ F+++ L
Sbjct: 308 KDISWGNQIRSYVFHPYTMVKDHRSKCETGNIHAVMDGALEPFIRSYL 355


>gi|15644327|ref|NP_229379.1| peptide chain release factor 2 [Thermotoga maritima MSB8]
 gi|7388057|sp|Q9X1R5|RF2_THEMA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|4982148|gb|AAD36646.1|AE001802_15 peptide chain release factor RF-2 [Thermotoga maritima MSB8]
          Length = 369

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 164/350 (46%), Positives = 232/350 (66%), Gaps = 2/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L ++   +  + + D   + L  +  K  DP +W +  +A+   ++ + L N    +K 
Sbjct: 14  ELEKKYKDVLSVVNEDEINKELEEVEKKLTDPSVWDDQKKAREYTQKLKRLKNISEDLKR 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++    D  + +EL   ++D  + Q   + +Q ++  V+  + E +L+G+ D N+AYL V
Sbjct: 74  VRSLFEDLEVAIEL--SDEDQEMAQHVEEIVQELEGAVKKLELEIILNGKYDPNNAYLSV 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA MLLRMY RWAE++ F  E +E   GEEAGIK AT+LIKG  AYG+L
Sbjct: 132 HPGAGGTESQDWAQMLLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATILIKGEYAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+  RRHTSF+S+ V P +DD ++IEI   D +I+T+RASG GGQ
Sbjct: 192 KHESGVHRLVRISPFDAARRRHTSFASVNVIPEIDDDVDIEIRPEDLKIETFRASGHGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN T+SAVRITH+PTG+VV CQ ERSQH+NK  A  +L+AKLY+LE++K+       + 
Sbjct: 252 YVNKTESAVRITHLPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKRREIQEIQG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +I WG QIRSY+  PY MVKD RT +E  +   V+DGD+D F++A L
Sbjct: 312 ELKDISWGNQIRSYIFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAEL 361


>gi|310815685|ref|YP_003963649.1| peptide chain release factor 2 [Ketogulonicigenium vulgare Y25]
 gi|308754420|gb|ADO42349.1| peptide chain release factor 2 [Ketogulonicigenium vulgare Y25]
          Length = 375

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 192/352 (54%), Positives = 244/352 (69%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + +  +    D + A  RL   N + EDP LW N   A+ LMR+RQ L + IS +  +
Sbjct: 12  IEKSITLVAQRMDRETASYRLEEFNARVEDPTLWDNPEAAQKLMRDRQVLLDKISNVDAL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L DN+ L+E+   E D  ++ E    L+ ++     K+ E+LL GEAD ND +LE++
Sbjct: 72  ERDLRDNIELIEMGEAEGDDDVVAEAEAALRALRDVAGKKEIEALLDGEADGNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTES DWA++L RMY RWAEK+ +  E      GEEAGIKS +  I G NAYGWLK
Sbjct: 132 SGAGGTESCDWASILARMYVRWAEKKGYTVEMQSESPGEEAGIKSVSYKISGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD+IEIE+ + D RIDTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEVQDKDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV    ++SQH+N+  A   L+++LY++EL +R    N    S
Sbjct: 252 VNTTDSAVRITHLPTGIVVTSS-QKSQHQNRDIAMKALKSRLYQIELDRRNAAINEAHES 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K   GWG QIRSYVLQPYQMVKDLRT+ E +    VLDGDLD FM ATLA+ 
Sbjct: 311 KGSAGWGNQIRSYVLQPYQMVKDLRTSHETSDTQGVLDGDLDGFMAATLAMD 362


>gi|218961845|ref|YP_001741620.1| Protein chain release factor B [Candidatus Cloacamonas
           acidaminovorans]
 gi|167730502|emb|CAO81414.1| Protein chain release factor B [Candidatus Cloacamonas
           acidaminovorans]
          Length = 340

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 158/331 (47%), Positives = 222/331 (67%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           +  L  K   P  W++  +AK + ++   L + +  +K++     +    L L  E+ + 
Sbjct: 2   IMELEQKMNAPDFWEDQTQAKKISKQLSQLRDELEHLKKLDTVKGELETYLTLLDEDFNA 61

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
            +L E    L RI+  +E  + E  L+ + D NDA L +H+GAGGTESQDWA MLLRMY 
Sbjct: 62  ELLAEAVSELPRIQSFIEKAEIECYLNDKYDHNDALLTIHSGAGGTESQDWAEMLLRMYA 121

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
            WAEK  +  + ++   GEEAG+KS ++ IKG  AYG LK E GVHRLVRISP+++  +R
Sbjct: 122 HWAEKNDYSFDIIDSLPGEEAGLKSVSVEIKGDYAYGMLKSEIGVHRLVRISPFNAQGKR 181

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
            TSF+S++VYP  D+ +EIEI+  D +IDT+RASGAGGQ+VNTTDSAVRITH+PT + V 
Sbjct: 182 QTSFASVFVYPEFDEDLEIEINPKDLKIDTFRASGAGGQYVNTTDSAVRITHLPTNITVT 241

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
           CQ ERSQ +N+ +A ++L+++LY+   ++RE+     E+SKTEIGWG QIRSYV  PYQM
Sbjct: 242 CQNERSQMQNREKAMSILKSRLYQYYEEQREKEKKNLENSKTEIGWGNQIRSYVFHPYQM 301

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +KD RTN E  +   V++GDL+DF+ A L  
Sbjct: 302 IKDHRTNYETGNVDKVMNGDLNDFIYAWLKY 332


>gi|228999928|ref|ZP_04159500.1| Peptide chain release factor 2 [Bacillus mycoides Rock3-17]
 gi|229007481|ref|ZP_04165078.1| Peptide chain release factor 2 [Bacillus mycoides Rock1-4]
 gi|228753869|gb|EEM03310.1| Peptide chain release factor 2 [Bacillus mycoides Rock1-4]
 gi|228759870|gb|EEM08844.1| Peptide chain release factor 2 [Bacillus mycoides Rock3-17]
          Length = 326

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 165/321 (51%), Positives = 214/321 (66%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
             W +   A+ ++ E   L   +   +++ +   +  +  EL  EE D  + +E    ++
Sbjct: 4   GFWDDQQGAQTVINEANALKEMVGKFRQLDETFENLEVTHELLKEEYDEDLHEELESEVK 63

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK +
Sbjct: 64  SLVREMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVD 123

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P
Sbjct: 124 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 183

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             +D IEIE+   D +IDTYRASGAGGQHVNTTDSAVRITH PT  VV CQ ERSQ KN+
Sbjct: 184 EFNDDIEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNR 243

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
             A  ML+AKLY+ +L++++   N     + EIGWG QIRSYV  PY +VKD RTN E  
Sbjct: 244 EHAMKMLKAKLYQKKLEEQQAQLNEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 303

Query: 334 SPSDVLDGDLDDFMKATLAIK 354
           +   V+DG++D F+ A L  +
Sbjct: 304 NVQAVMDGEIDPFIDAYLRSR 324


>gi|24216466|ref|NP_713947.1| peptidyl-tRNA hydrolase [Leptospira interrogans serovar Lai str.
           56601]
 gi|59798086|sp|Q8EZT4|RF2_LEPIN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|24197768|gb|AAN50965.1| peptidyl-tRNA hydrolase involved in peptide chain release
           [Leptospira interrogans serovar Lai str. 56601]
          Length = 367

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 166/351 (47%), Positives = 229/351 (65%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L         L + +    RL  L  K EDP+LW N  EA+++ +++  L+  ++    
Sbjct: 15  ELQENFLNRWKLLNLEQDKDRLKSLTEKAEDPNLWNNPEEARLVSQKKNELEKKLNPWFT 74

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           IQ  + D   L++L L+E   + + E S    R++ + E  +    L    D   A+L +
Sbjct: 75  IQQDILDFPDLVDLTLDEKGENGVGELSSEYNRLQEKFEELELLGALKNPEDLKPAFLNI 134

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA MLLRMYTR+ EK+ ++   +++  G+ AGIK+ATL + G  A+G+L
Sbjct: 135 HPGAGGTESQDWAEMLLRMYTRYFEKKGYQYSLIDVQAGDGAGIKNATLHVIGDFAFGFL 194

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE GVHRLVRISP+D+N RRHTSF S+ V P +DD I+I+I E D R+D YR+SGAGGQ
Sbjct: 195 KGENGVHRLVRISPFDANKRRHTSFVSVHVSPEIDDDIDIKIEEKDIRVDVYRSSGAGGQ 254

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+P+G+VV CQ ERSQ KN+  A+ ML+A+LYELE +K +E       
Sbjct: 255 HVNTTDSAVRITHMPSGIVVACQNERSQIKNRDTAFKMLKARLYELEQEKAKEELEKKSG 314

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            K +I WG QIRSYV  PY +VKD RT+ E  + + V+DGD++ F+ A L 
Sbjct: 315 EKKDIAWGSQIRSYVFHPYNLVKDHRTDHETGNVAAVMDGDIEPFILAYLK 365


>gi|313893701|ref|ZP_07827268.1| peptide chain release factor 2 [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313441715|gb|EFR60140.1| peptide chain release factor 2 [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 330

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 169/325 (52%), Positives = 230/325 (70%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W N  +A+ + +E   L NA+   K++   + D  ++LE+A+EEDD S+  E  
Sbjct: 1   MSDPTFWDNPDKAREISQEATQLKNAVESYKQLVSDIEDANVMLEMAIEEDDSSMESEIK 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + ++ I+  VE ++   LLSGE D+N+A L  HAGAGGTE+QDW +ML+RMY RWAEK  
Sbjct: 61  EYVKAIEETVEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKSG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E ++   G+EAG KS+T LIKG NA+G+LK E+GVHRLVRISP+D+ +RRHTSF+++
Sbjct: 121 FSIELMDEQPGDEAGTKSSTFLIKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD++EI I   D ++DTYRASGAGGQH+N TDSAVR+TH PTG+VVQCQ +RSQ
Sbjct: 181 DVMPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQTQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+ QA  +LRAKL+ELEL+K+ EI      +   I WG QIRSYV  PY +VKD RTN
Sbjct: 241 MQNREQALRLLRAKLFELELEKQAEIKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DG+LD F++  L  +
Sbjct: 301 VETGNVQAVMDGNLDQFIEGFLKKE 325


>gi|222530070|ref|YP_002573952.1| hypothetical protein Athe_2103 [Caldicellulosiruptor bescii DSM
           6725]
 gi|222456917|gb|ACM61179.1| hypothetical protein Athe_2103 [Caldicellulosiruptor bescii DSM
           6725]
          Length = 372

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 172/349 (49%), Positives = 236/349 (67%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
              L  +G LFD D     L  L T+T  P  WQ++  ++ ++++ + + + I   +++ 
Sbjct: 15  EEDLKEMGFLFDIDGLESELKSLETETSKPEFWQDIENSQRILQKIKRIKDKIERFQKLY 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            +  D  +L EL++EE +  + +E    L  ++ +++  + E LL+G  D N+A L +HA
Sbjct: 75  SQWEDLKVLTELSIEEGNHEMSEELEKELISLERKIDEFKIEILLNGPYDKNNAILSIHA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDWA MLLRMYTRWA K+ +K E L+I  GEEAGIK+ T+ I G NAYG+LK 
Sbjct: 135 GAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTIRIVGENAYGYLKA 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+D+  RRHTSF+++ V P V+D  +IEI E D  IDTYR+SGAGGQHV
Sbjct: 195 EKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTYRSSGAGGQHV 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRI HIPTG+VV CQ ERSQHKN+  A  +L+AKL EL+ ++R E     +  +
Sbjct: 255 NKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQ 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           TEIGWG QIRSYV  PY +VKD RT  E  +   V+DG++D F+ A L 
Sbjct: 315 TEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363


>gi|304439754|ref|ZP_07399652.1| peptide chain release factor RF2 [Peptoniphilus duerdenii ATCC
           BAA-1640]
 gi|304371741|gb|EFM25349.1| peptide chain release factor RF2 [Peptoniphilus duerdenii ATCC
           BAA-1640]
          Length = 368

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 175/353 (49%), Positives = 235/353 (66%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   +N L    D D    +L  LN K  +   W +   A+  ++E  H +  I  +K 
Sbjct: 14  EIESMVNSLIESMDIDGMKAKLRDLNDKQMEEGFWDDTESAQKTIKEFNHYNRKIENLKS 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + D +     LLE+   E D S  ++  D+L +++   E  +  +LL+ + D ND  L++
Sbjct: 74  LTDEISSLKDLLEIMEMEGDYSSYKDFKDDLIKLEKHAEDFKIATLLNDKYDDNDVILQI 133

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTE+QDWA+MLLRMYTR+ E++ F  E L++   +EAGIKSATLLIKG + YG+L
Sbjct: 134 HAGAGGTEAQDWASMLLRMYTRYCEQKGFSAEILDLQKEDEAGIKSATLLIKGDSCYGYL 193

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE+GVHRLVRISP+DSN RRHTSFSS+ VYP ++D  +++I   D +IDTYR+SGAGGQ
Sbjct: 194 KGEKGVHRLVRISPFDSNKRRHTSFSSVDVYPELEDVEDVDIKPEDLKIDTYRSSGAGGQ 253

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTGVVVQCQ ERSQ +N+  A  +L+AKL  L  ++++E       
Sbjct: 254 HVNTTDSAVRITHIPTGVVVQCQNERSQIQNRETAMKLLKAKLISLAQEEQKEAIEDLSG 313

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + ++I WG QIRSYV QPY MVKD RTN E      V+DG+LD F+ A L  K
Sbjct: 314 NYSQIAWGSQIRSYVFQPYTMVKDHRTNEEIGDVESVMDGNLDPFINAYLQSK 366


>gi|282905164|ref|ZP_06313021.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282331571|gb|EFB61083.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           Btn1260]
          Length = 331

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 158/326 (48%), Positives = 215/326 (65%), Gaps = 1/326 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              +P+ W N  +A+ ++ +   L   ++  K +Q  + D     +L  EE +  + ++ 
Sbjct: 1   MMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFEGEMKEDL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              +   K +V+  + + LL G  D+N+A LE+H GAGGTESQDWANML RMY R+ EK+
Sbjct: 61  EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKK 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S
Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180

Query: 209 IWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
             V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH P+G+VV  Q ER
Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNER 240

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KN+  A  ML++KLY+L+L+++          + EIGWG QIRSYV  PY MVKD R
Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAI 353
           TN E      V+DGD+  F+++ L  
Sbjct: 301 TNEETGKVDAVMDGDIGPFIESYLRQ 326


>gi|296876160|ref|ZP_06900214.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC
           15912]
 gi|312867359|ref|ZP_07727568.1| peptide chain release factor 2 [Streptococcus parasanguinis F0405]
 gi|296432871|gb|EFH18664.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC
           15912]
 gi|311097060|gb|EFQ55295.1| peptide chain release factor 2 [Streptococcus parasanguinis F0405]
          Length = 336

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 149/336 (44%), Positives = 206/336 (61%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L  K  +P  W + I A+   +E   L        ++ D   ++ ILL+   E
Sbjct: 1   MEEEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMVDLFDESEILLDFLAE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +D                  +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLL
Sbjct: 61  DDSVKEELIEKLEELD--KRMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLL 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTR+     FK E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS
Sbjct: 119 RMYTRFGNAHGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG
Sbjct: 179 AKRRHTSFTSVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY+LE +K+    +  +  K EI WG QIRSYV  
Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN E      V+DGD+D F+ A L  +
Sbjct: 299 PYTMVKDHRTNYEVAQVDKVMDGDIDGFIDAYLKWR 334


>gi|310778152|ref|YP_003966485.1| bacterial peptide chain release factor 2 (bRF-2) [Ilyobacter
           polytropus DSM 2926]
 gi|309747475|gb|ADO82137.1| bacterial peptide chain release factor 2 (bRF-2) [Ilyobacter
           polytropus DSM 2926]
          Length = 365

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 159/351 (45%), Positives = 227/351 (64%), Gaps = 1/351 (0%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
            ++  + G  D +    ++  L  +T     W +  E++ L++E   L   I   + I+ 
Sbjct: 15  EKIEEIRGSLDLEGKENKVKELEKETLKDGFWNDKRESEKLIKEMNALKEIIGEYRSIEK 74

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              +  +LLE     +D  + +      + +   +     + LL GE D+N+A + +H+G
Sbjct: 75  LSDEVSVLLEFVEMGEDEFLEE-LETKHRGLDKVIGAFDVKLLLDGEFDANNAIVTIHSG 133

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGGTE+ DWA+ML RMY+RW   R +K   L+   GE  GIKS T+L++G  AYG+LK E
Sbjct: 134 AGGTEACDWADMLYRMYSRWCNNRGYKITELDFMPGEMVGIKSITILVEGMRAYGYLKNE 193

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           +G+HRLVRISP+D+N +RHTSF+S+ V P VD++ +IEI+  D +IDTYRASGAGGQHVN
Sbjct: 194 KGIHRLVRISPFDANKKRHTSFASVDVMPEVDETTDIEINTGDLKIDTYRASGAGGQHVN 253

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRITH+P+GVVV CQ+ERSQ +N+  A  +LR+KL ELE++KREE     +  ++
Sbjct: 254 TTDSAVRITHLPSGVVVTCQRERSQLQNRETAMKLLRSKLLELEMKKREEELKKIQGEQS 313

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IGWG QIRSYV QPY +VKD RT +E  +   V+DGD+DDF+   L   K
Sbjct: 314 DIGWGSQIRSYVFQPYTLVKDHRTLVESGNIKAVMDGDIDDFINGHLRWLK 364


>gi|261409628|ref|YP_003245869.1| peptide chain release factor 2 [Paenibacillus sp. Y412MC10]
 gi|261286091|gb|ACX68062.1| peptide chain release factor 2 [Paenibacillus sp. Y412MC10]
          Length = 331

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 168/325 (51%), Positives = 223/325 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +  +A+ L+ E   + +++   +++Q    D ++++ELA EE D S+  E  
Sbjct: 1   MAAPDFWDDNEKAQALIAEMNAVKSSVDQYQKLQADYDDAVVMIELADEEGDDSLAGEIG 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + ++ +   VE  + + LL+   D  +A LE+H GAGGTESQDW  ML RMYTRWAEKR 
Sbjct: 61  ETIKDLVGRVEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLHRMYTRWAEKRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGFNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + D +EI+I   D +IDTYRASGAGGQH+NTTDSAVRITH+PTGVVV CQ ERSQ
Sbjct: 181 DVVPEITDDVEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGVVVTCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A  MLR+KLYE +++++++        +++I WG QIRSYV  PY MVKD RT 
Sbjct: 241 IKNRERAMTMLRSKLYERKIEEQQKELAEIRGEQSDIAWGSQIRSYVFHPYSMVKDHRTQ 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DGDLD F+   L  +
Sbjct: 301 VETGNVGAVMDGDLDGFIDGYLRSQ 325


>gi|126729874|ref|ZP_01745687.1| peptide chain release factor 2 [Sagittula stellata E-37]
 gi|126709993|gb|EBA09046.1| peptide chain release factor 2 [Sagittula stellata E-37]
          Length = 374

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 186/353 (52%), Positives = 240/353 (67%), Gaps = 2/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ + L+ L     W+ A  RL   N + EDP+LW N   A+ LMR+RQ L +A+     
Sbjct: 11  KIEKSLDLLKQRLGWETAQHRLEEFNARVEDPNLWDNPEAAQKLMRDRQSLVDALESYTS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D + L+EL   E+D  ++ +    L+ +      K+ E+LL GE D NDA+LE+
Sbjct: 71  LKQELEDQVELIELGEMEEDAEVVADAEAALKALVETSAKKELEALLDGETDGNDAFLEI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGTE+ DWANML RMY RWAEKR F+ +  E   G EAGIKSAT  IKG NAYGWL
Sbjct: 131 KAGAGGTEACDWANMLARMYVRWAEKRGFEVDLQEEQAGAEAGIKSATYQIKGKNAYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G HRLVRISP+   +R  TSF+++  YPV+DD+IE+ ++ +D RIDT+R+SGAGGQ
Sbjct: 191 KSESGTHRLVRISPFGKGTR-ETSFAAVGAYPVIDDNIEVTVNPADIRIDTFRSSGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY+LEL +R    N    
Sbjct: 250 HVNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQLELDRRNAEVNALHE 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +K + GWG QIRSYVLQPYQMVKDLRT  E      VLDGDLD FM+ATLA++
Sbjct: 309 AKGDAGWGNQIRSYVLQPYQMVKDLRTQYETADTQGVLDGDLDPFMEATLALQ 361


>gi|49188023|ref|YP_031276.1| peptide chain release factor 2 [Bacillus anthracis str. Sterne]
 gi|49181950|gb|AAT57326.1| peptide chain release factor 2 [Bacillus anthracis str. Sterne]
          Length = 326

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 165/325 (50%), Positives = 214/325 (65%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
                 W +   A+ ++ E   L + +   +++ +   +  I  EL  EE D  + +E  
Sbjct: 1   MMGAGFWDDQQGAQAVINEANALKDMVGKFRQLDETFENLEITHELLKEEYDEDLHEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +  E+   + + LLS   D N A LE+H GAGGTESQDW +MLLRMYTRWAEKR 
Sbjct: 61  SEVKGLIQEMNEYELQLLLSDPYDKNKAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D +EIE+   D +IDTYRASGAGGQHVNTTDSAVRITH PT  VV CQ ERSQ
Sbjct: 181 EVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+  A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DG++D F+ A L  +
Sbjct: 301 TEVGNVQAVMDGEIDPFIDAYLRSR 325


>gi|99080709|ref|YP_612863.1| peptide chain release factor 2 [Ruegeria sp. TM1040]
 gi|122984362|sp|Q1GIB5|RF2_SILST RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|99036989|gb|ABF63601.1| bacterial peptide chain release factor 2 (bRF-2) [Ruegeria sp.
           TM1040]
          Length = 374

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 191/352 (54%), Positives = 245/352 (69%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L+ L    +W+ A  RL   N + EDP+LW +   A+ LMR+RQ L +A+   K I
Sbjct: 12  IEKSLDLLAQRMNWETAEFRLEEFNARVEDPNLWDDPAAAQKLMRDRQSLVDAMDTYKSI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D++ L+EL   E+D  ++++  D L+ +K +   K+ E+LL GE D NDA+LE+ 
Sbjct: 72  RQDLQDSVELIELGEMEEDAEVVKDAEDTLKALKEKAAQKELEALLDGETDPNDAFLEIK 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+ML RMY RWAE R F  E  E   G EAGIKSAT  IKG NAYGWLK
Sbjct: 132 AGAGGTEACDWASMLARMYVRWAESRGFSVELQEEQAGAEAGIKSATYQIKGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+   +R  TSF+++  YPV+DD+IEIE++ +D RIDTYR+SGAGGQH
Sbjct: 192 SESGTHRLVRISPFGKGTR-ETSFAAVGAYPVIDDNIEIEVNPADIRIDTYRSSGAGGQH 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY+LEL +R    N    +
Sbjct: 251 VNTTDSAVRITHEPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQLELDRRNAEVNALHEA 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K + GWG QIRSYV+QPYQMVKDLRTN E      VLDGDLD FM ATLA+K
Sbjct: 310 KGDAGWGNQIRSYVMQPYQMVKDLRTNHETADTKGVLDGDLDGFMAATLAMK 361


>gi|292487146|ref|YP_003530016.1| peptide chain release factor 1 [Erwinia amylovora CFBP1430]
 gi|291552563|emb|CBA19608.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora CFBP1430]
 gi|312171251|emb|CBX79510.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora ATCC
           BAA-2158]
          Length = 332

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 176/330 (53%), Positives = 229/330 (69%), Gaps = 1/330 (0%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             +N + E P +W     A+ L +ER  L+  +  + ++   L D   LLELA+E +D  
Sbjct: 2   QEVNAELEQPDVWNEPDRAQALGKERSALEAVVETLDQMTQGLEDVSGLLELAVEAEDED 61

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
              E    L  +  ++   +F  + SGE DS D Y+++ AG+GGTE+QDWA+MLLRMY R
Sbjct: 62  TFNEAVAELDGLDKKLGELEFRRMFSGEYDSADCYMDIQAGSGGTEAQDWASMLLRMYLR 121

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           WAE + FKTE +E  DGE AG KSAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRH
Sbjct: 122 WAEAKGFKTEIIEESDGEVAGTKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRH 181

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSFSS+++YP VDD+I+IEI+ +D RID YRASGAGGQHVN T+SAVRITH+PT +VVQC
Sbjct: 182 TSFSSVFIYPEVDDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQC 241

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           Q +RSQHKNK QA+  LRAKLYE E+QK+       E +K++IGWG QIRSYVL     +
Sbjct: 242 QNDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQTAEDNKSDIGWGSQIRSYVLDD-SRI 300

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KDLRT++E  +   VLDGDLD F++A+L  
Sbjct: 301 KDLRTSVETRNTQAVLDGDLDRFIEASLKA 330


>gi|312621634|ref|YP_004023247.1| hypothetical protein Calkro_0529 [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202101|gb|ADQ45428.1| hypothetical protein Calkro_0529 [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 372

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 168/349 (48%), Positives = 232/349 (66%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
              L  +    D D     L  L  +T  P  WQ++  ++ ++++ + + + I   +++ 
Sbjct: 15  EEDLKEMRVSLDIDGLESELKSLENETSKPEFWQDIENSQKVLQKIKRIKDKIERFQKLY 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            +  D  +L EL++EE +  + +E    L  ++ +++  + E LL+G  D N+A L +HA
Sbjct: 75  SQWEDLKVLTELSIEEGNHEMSEELEKELISLERKIDEFKIEILLNGPYDKNNAILSIHA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDWA MLLRMYTRWA K+ +K E L+I  GEEAGIK+ T+ I G NAYG+LK 
Sbjct: 135 GAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTIRIVGENAYGYLKA 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+D+  RRHTSF+++ V P V+D  +IEI E D  IDTYR+SGAGGQHV
Sbjct: 195 EKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKEEDLEIDTYRSSGAGGQHV 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRI HIPTG+VV CQ ERSQHKN+  A  +L+AKL EL+ ++R E     +  +
Sbjct: 255 NKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQ 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           TEIGWG QIRSYV  PY +VKD RT  E  +   V+DG++D F+ A L 
Sbjct: 315 TEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363


>gi|327190272|gb|EGE57372.1| peptide chain release factor 2 [Rhizobium etli CNPAF512]
          Length = 342

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 237/328 (72%), Positives = 284/328 (86%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
           N K EDP+LW +  EA+ LMRERQ LD+ I+ +K+++ +L DN+ L+EL  EE D S+++
Sbjct: 2   NNKAEDPNLWNDAAEAQKLMRERQQLDDGINGVKQLEQQLNDNIELIELGEEEGDLSVVK 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E  D L+ +K E   +Q E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWAE
Sbjct: 62  EAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWAE 121

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           +++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSF
Sbjct: 122 RQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSF 181

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           SSIWVYPVVDDSI+IEI+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VVQCQQE
Sbjct: 182 SSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQE 241

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQHKN+A+AW+MLRA++YE EL+KRE+ AN   +SKT+IGWG QIRSYVLQPYQ+VKDL
Sbjct: 242 RSQHKNRAKAWDMLRARMYEAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKDL 301

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           RT +  T+P DVLDGDL++FM+A LA +
Sbjct: 302 RTGVASTAPDDVLDGDLNEFMEAALAHR 329


>gi|326383344|ref|ZP_08205032.1| peptide chain release factor 2 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326198094|gb|EGD55280.1| peptide chain release factor 2 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 370

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 157/357 (43%), Positives = 225/357 (63%), Gaps = 8/357 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D +   +R+  L  +  DP LW +   A+ +  E  H    +  + E+
Sbjct: 12  LDATLTTVEKVMDLEELRRRIDELEMQASDPDLWNDQDHAQKVTSELSHAQAELRRVTEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + RL D  +L ELA  E+  + +  T D       ++ ++E  + +++L+GE D  +A +
Sbjct: 72  RSRLDDLPVLYELAEAEEGDAGVSATEDADTERADLRRDIEAMEVKTMLAGEYDPREALV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+     E  +    EEAG+KSAT  +K P  YG
Sbjct: 132 NIRSGAGGVDAADWAQMLMRMYIRWAEQHGHSVEVYDTSYAEEAGLKSATFAVKAPYMYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I E+D R+D YR+SG G
Sbjct: 192 TLSVEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIDIDENDVRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+TH+PTG+VV CQ E+SQ +NK  A  +L+AKL E   +KR+E     
Sbjct: 252 GQSVNTTDSAVRLTHVPTGIVVTCQNEKSQLQNKVAAMRVLQAKLLE---RKRQEERAQM 308

Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           ++ K++ G  WG Q+RSYVL PYQMVKDLRTN+E  +PS VLDG+LD F++A +  +
Sbjct: 309 DALKSDTGASWGNQMRSYVLHPYQMVKDLRTNVESNNPSAVLDGELDQFIEAGIRWR 365


>gi|170289031|ref|YP_001739269.1| peptide chain release factor 2 [Thermotoga sp. RQ2]
 gi|281412649|ref|YP_003346728.1| peptide chain release factor 2 [Thermotoga naphthophila RKU-10]
 gi|238688848|sp|B1LB88|RF2_THESQ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|170176534|gb|ACB09586.1| peptide chain release factor 2 [Thermotoga sp. RQ2]
 gi|281373752|gb|ADA67314.1| peptide chain release factor 2 [Thermotoga naphthophila RKU-10]
          Length = 367

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 164/350 (46%), Positives = 232/350 (66%), Gaps = 2/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L ++   +  + + D   + L  +  K  DP +W +  +A+   ++ + L N    +K 
Sbjct: 12  ELEKKYKDVLSVVNEDEINKELEEVEKKLTDPSVWDDQKKAREYTQKLKRLKNISEDLKR 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++    D  + +EL   ++D  + Q   + +Q ++  V+  + E +L+G+ D N+AYL V
Sbjct: 72  VRSLFEDLEVAIEL--SDEDQEMAQHVEEIVQELEGAVKKLELEIILNGKYDPNNAYLSV 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA MLLRMY RWAE++ F  E +E   GEEAGIK AT+LIKG  AYG+L
Sbjct: 130 HPGAGGTESQDWAQMLLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATILIKGEYAYGYL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+  RRHTSF+S+ V P +DD ++IEI   D +I+T+RASG GGQ
Sbjct: 190 KHESGVHRLVRISPFDAARRRHTSFASVNVIPEIDDDVDIEIRPEDLKIETFRASGHGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN T+SAVRITH+PTG+VV CQ ERSQH+NK  A  +L+AKLY+LE++K+       + 
Sbjct: 250 YVNKTESAVRITHLPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKRREIQEIQG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +I WG QIRSY+  PY MVKD RT +E  +   V+DGD+D F++A L
Sbjct: 310 ELKDISWGNQIRSYIFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAEL 359


>gi|228942321|ref|ZP_04104860.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228975250|ref|ZP_04135808.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981888|ref|ZP_04142183.1| Peptide chain release factor 2 [Bacillus thuringiensis Bt407]
 gi|228778000|gb|EEM26272.1| Peptide chain release factor 2 [Bacillus thuringiensis Bt407]
 gi|228784529|gb|EEM32550.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817365|gb|EEM63451.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
          Length = 326

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 164/325 (50%), Positives = 216/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
                 W +   A++++ E   L + +   +++ +   +  +  EL  EE D  + +E  
Sbjct: 1   MMGAGFWDDQQGAQVVINEANALKDMVGSFRQLDETFENLEVTHELLKEEYDEDLHEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR 
Sbjct: 61  SEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D +EIE+   D +IDTYRASGAGGQHVNTTDSAVRITH PT  VV CQ ERSQ
Sbjct: 181 EVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+  A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DG++D F+ A L  +
Sbjct: 301 TEVGNVQAVMDGEIDPFIDAYLRSR 325


>gi|134097701|ref|YP_001103362.1| putative peptide chain release factor 2 [Saccharopolyspora
           erythraea NRRL 2338]
 gi|291006339|ref|ZP_06564312.1| putative peptide chain release factor 2 [Saccharopolyspora
           erythraea NRRL 2338]
 gi|166225115|sp|A4F8R2|RF2_SACEN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|133910324|emb|CAM00437.1| putative peptide chain release factor 2 [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 367

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 152/354 (42%), Positives = 223/354 (62%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS  L  +  + D D    +++ L  +   P LW +V  A+ +  +  H  + +  IK+
Sbjct: 11  ELSTTLEGIESVMDLDALRAKIAELEEEAARPDLWDDVEHAQRVSSQLVHRQSELRKIKD 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ R+ D  +L EL+ +E D S L E      ++K ++E  +  +LLSG+ D  +A + +
Sbjct: 71  LRQRVEDLEVLYELSEDEGDDSGLAEADSERTKLKKDLEALEVRTLLSGDYDQREAVVTI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            A AGG ++ D+A ML+RMY RWAE+ ++  E  +    EEAG+KSAT  +  P AYG L
Sbjct: 131 RAEAGGVDAADFAEMLMRMYVRWAERHEYPVEVYDTSYAEEAGLKSATFRVNAPYAYGTL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ + V PVV+++  +EI E D R+D +R+SG GGQ
Sbjct: 191 SVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVEIPEKDIRVDVFRSSGPGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITHIPTG+VV CQ E+SQ +NKA A  +L++KL   + ++     +  + 
Sbjct: 251 SVNTTDSAVRITHIPTGIVVSCQNEKSQLQNKAAALRVLQSKLLAKKKEQERAELDALKD 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           S +   WG Q+RSYVL PYQMVKDLRT  E  +P  VLDG +D F++A +  ++
Sbjct: 311 SGS--SWGNQMRSYVLHPYQMVKDLRTEFEVGNPDAVLDGQIDGFLEAGIRWRR 362


>gi|116492233|ref|YP_803968.1| peptide chain release factor 2 [Pediococcus pentosaceus ATCC 25745]
 gi|116102383|gb|ABJ67526.1| bacterial peptide chain release factor 2 (bRF-2) [Pediococcus
           pentosaceus ATCC 25745]
          Length = 343

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 163/328 (49%), Positives = 218/328 (66%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             K  +P+ W N  +A++++ E   L       K + D + +  +  EL   EDD  +  
Sbjct: 9   EAKMAEPNFWDNQEQAQIVINENNELKQKYDNFKNLTDHVENLEVTAELLEMEDDPDVQS 68

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E    L      ++  +   LL+G+ D+N+A +E+H GAGGTESQDW +MLLRMYTRWAE
Sbjct: 69  EFESELAATAKLLQDYRLGLLLNGKYDANNAIIEIHPGAGGTESQDWGSMLLRMYTRWAE 128

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           + +FK +  +   GE AGI S T+ I G NAYG+L+ E+GVHRLVR+SP+DS  RRHTSF
Sbjct: 129 QHQFKVQIEDYQAGEVAGISSVTMRIVGHNAYGYLRSEKGVHRLVRLSPFDSAGRRHTSF 188

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S+ V P +DDS+E+ I++ D R+D YR+SGAGGQH+N T SAVRITH+PTG+VV  Q E
Sbjct: 189 ASVDVMPELDDSVEVNINQDDLRVDVYRSSGAGGQHINKTSSAVRITHLPTGIVVASQAE 248

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQ +N+A A +ML+AKL+ELE QK+ E     E  + EIGWG QIRSYV  PY MVKD 
Sbjct: 249 RSQLQNRATAMSMLKAKLFELEEQKKAEEKAKIEGIQLEIGWGSQIRSYVFHPYSMVKDH 308

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           R+N E  +   V+DGD DDF+ A L  K
Sbjct: 309 RSNFETANVQGVMDGDFDDFINAYLQWK 336


>gi|160902329|ref|YP_001567910.1| peptide chain release factor 2 [Petrotoga mobilis SJ95]
 gi|189040002|sp|A9BHH8|RF2_PETMO RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|160359973|gb|ABX31587.1| peptide chain release factor 2 [Petrotoga mobilis SJ95]
          Length = 366

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 173/350 (49%), Positives = 235/350 (67%), Gaps = 2/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L      L  +F+ D   + +  L+ +  +P+ W +   AK + +  Q+L + I   K+
Sbjct: 12  ELKENFEDLKDVFNIDKVEEEVKKLDKEMMEPNFWNDQNRAKKISKMAQNLKDEIDEFKK 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +++   +  I +EL   EDD S+  +    L+ I+ ++   +   LLS E D  +A+L +
Sbjct: 72  LENDFEELEIAVEL--SEDDPSMTAQVEAILKVIEKKIGSFRLRMLLSEEYDDANAFLSL 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA+MLLRMYTRWA+K  +  E ++  +G+EAGIKSAT+ I GP AYG L
Sbjct: 130 HPGAGGTESQDWASMLLRMYTRWADKNNYDIETIDFQEGDEAGIKSATIKISGPYAYGKL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+N RRHTSF+SI V P  D+++EIEI+  D +IDTYR+ GAGGQ
Sbjct: 190 KYESGVHRLVRISPFDANGRRHTSFASISVMPEFDENVEIEINPDDLKIDTYRSGGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITH+PTG+VV  Q ERSQH+NKA A  +L+AKLYELE QK+ E       
Sbjct: 250 HVNKTDSAVRITHLPTGIVVAVQNERSQHQNKATALKILKAKLYELEHQKKLEEKLRLRG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +I WG QIRSYVL PY +VKDLRT  E ++   VLDG++D+F++  L
Sbjct: 310 EVKDISWGNQIRSYVLYPYTLVKDLRTEYETSNAQAVLDGEIDEFIEEEL 359


>gi|15923744|ref|NP_371278.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15926431|ref|NP_373964.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           N315]
 gi|82750458|ref|YP_416199.1| peptide chain release factor 2 [Staphylococcus aureus RF122]
 gi|156979082|ref|YP_001441341.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253731382|ref|ZP_04865547.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|255005545|ref|ZP_05144146.2| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257794925|ref|ZP_05643904.1| peptide chain release factor 2 [Staphylococcus aureus A9781]
 gi|262052329|ref|ZP_06024532.1| peptide chain release factor 2 [Staphylococcus aureus 930918-3]
 gi|296275163|ref|ZP_06857670.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MR1]
 gi|13700645|dbj|BAB41942.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           N315]
 gi|14246523|dbj|BAB56916.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|82655989|emb|CAI80394.1| peptide chain release factor 2 [Staphylococcus aureus RF122]
 gi|156721217|dbj|BAF77634.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253724907|gb|EES93636.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|257788897|gb|EEV27237.1| peptide chain release factor 2 [Staphylococcus aureus A9781]
 gi|259159769|gb|EEW44810.1| peptide chain release factor 2 [Staphylococcus aureus 930918-3]
 gi|283470047|emb|CAQ49258.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           ST398]
 gi|285816456|gb|ADC36943.1| Peptide chain release factor 2 [Staphylococcus aureus 04-02981]
 gi|298694086|gb|ADI97308.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           ED133]
 gi|312829246|emb|CBX34088.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|320141998|gb|EFW33826.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329313475|gb|AEB87888.1| Peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           T0131]
          Length = 330

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 159/325 (48%), Positives = 215/325 (66%), Gaps = 1/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P+ W N  +A+ ++ +   L   ++  K +Q  + D     +L  EE D  + ++  
Sbjct: 1   MAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDLE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             +   K +V+  + + LL G  D+N+A LE+H GAGGTESQDWANML RMY R+ EK+ 
Sbjct: 61  QEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S 
Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180

Query: 210 WVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
            V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH P+G+VV  Q ERS
Sbjct: 181 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q KN+  A  ML++KLY+L+L+++          + EIGWG QIRSYV  PY MVKD RT
Sbjct: 241 QIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353
           N E      V+DGD+  F+++ L  
Sbjct: 301 NEETGKVDAVMDGDIGPFIESYLRQ 325


>gi|313884513|ref|ZP_07818274.1| peptide chain release factor 2 [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312620297|gb|EFR31725.1| peptide chain release factor 2 [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 341

 Score =  264 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 170/336 (50%), Positives = 223/336 (66%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++    +   P  W +  +A+ ++ +      +   I+++  ++ D  + LEL  E
Sbjct: 1   MEEDIADYEHQMLAPDFWDDNDKAQKVISQLNEAKASYQTIQDLVSQVDDLGMALELYEE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             D  +L E  D +      +   + + LLSG  DS +A LE+H GAGGTESQDW +MLL
Sbjct: 61  SQDLDMLSEAEDIMTVTSKALNNYELQLLLSGPHDSANAILEIHPGAGGTESQDWGSMLL 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RWA+K+ F+ E L+   G+EAGIKS TL IKG NAYG+LK E+GVHRLVRISP+DS
Sbjct: 121 RMYQRWADKQGFQVEVLDYQAGDEAGIKSVTLEIKGHNAYGYLKSEKGVHRLVRISPFDS 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           N+RRHTSF+SI V P +DDSIEIEI+  D R+DTYRASGAGGQH+N T SAVRITHIPTG
Sbjct: 181 NARRHTSFASIEVTPEMDDSIEIEINPDDIRVDTYRASGAGGQHINKTSSAVRITHIPTG 240

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +V Q Q +RSQ +N+ QA  ML+AKLY+ E ++R +     +  + EIGWG QIRSYV  
Sbjct: 241 IVTQSQAQRSQFQNRDQAMAMLKAKLYQREEEERAKEMAAIKGQQLEIGWGSQIRSYVFH 300

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RT  E  +   V+DGDLD FM A L  +
Sbjct: 301 PYSMVKDHRTGYEVGNSQAVIDGDLDGFMDAYLKWQ 336


>gi|84515548|ref|ZP_01002910.1| peptide chain release factor 2 [Loktanella vestfoldensis SKA53]
 gi|84510831|gb|EAQ07286.1| peptide chain release factor 2 [Loktanella vestfoldensis SKA53]
          Length = 374

 Score =  264 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 193/352 (54%), Positives = 248/352 (70%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + LN L    D++ A  RL   + + EDP LW +   A+ LMR+RQ L + ++    I
Sbjct: 12  IQKSLNLLAQRMDYETARYRLEEFDARVEDPTLWDDPDAAQKLMRDRQVLVDTLTMHDTI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L DN+ L+E+   E D  I+ E  + L+ ++ +   K+ E+LL GEAD+ND +LEV+
Sbjct: 72  KQELADNIELIEMGEMEGDADIITEAEEALKSLREKAAQKELEALLDGEADANDTFLEVN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWANML RMY RWAEK+ +K E   +  G+EAGIKS T  I G NAYGWLK
Sbjct: 132 AGAGGTESCDWANMLSRMYVRWAEKKGYKVELQSMQSGDEAGIKSVTYKIMGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD R+DTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRLDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL KR  + N    +
Sbjct: 252 VNTTDSAVRITHFPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDKRSALVNEAHEN 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             + GWG QIRSYVLQPYQMVKDLRT  E +    VLDGDLD  M ATLA+ 
Sbjct: 311 AGDAGWGNQIRSYVLQPYQMVKDLRTGFETSDTKGVLDGDLDGLMGATLALD 362


>gi|148267214|ref|YP_001246157.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           JH9]
 gi|151220935|ref|YP_001331757.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|221141228|ref|ZP_03565721.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           str. JKD6009]
 gi|253315812|ref|ZP_04839025.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           str. CF-Marseille]
 gi|253732798|ref|ZP_04866963.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|258418241|ref|ZP_05682506.1| peptide chain release factor 2 [Staphylococcus aureus A9763]
 gi|258430733|ref|ZP_05688445.1| peptide chain release factor 2 [Staphylococcus aureus A9299]
 gi|258440954|ref|ZP_05690789.1| peptide chain release factor 2 [Staphylococcus aureus A8115]
 gi|258445784|ref|ZP_05693961.1| peptide chain release factor 2 [Staphylococcus aureus A6300]
 gi|258449595|ref|ZP_05697697.1| peptide chain release factor 2 [Staphylococcus aureus A6224]
 gi|258452962|ref|ZP_05700956.1| peptide chain release factor 2 [Staphylococcus aureus A5948]
 gi|258453995|ref|ZP_05701967.1| peptide chain release factor 2 [Staphylococcus aureus A5937]
 gi|269202375|ref|YP_003281644.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282895050|ref|ZP_06303271.1| peptide chain release factor 2 [Staphylococcus aureus A8117]
 gi|282916096|ref|ZP_06323859.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           D139]
 gi|282922051|ref|ZP_06329748.1| peptide chain release factor 2 [Staphylococcus aureus A9765]
 gi|282926620|ref|ZP_06334250.1| peptide chain release factor 2 [Staphylococcus aureus A10102]
 gi|283769917|ref|ZP_06342809.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           H19]
 gi|297208519|ref|ZP_06924948.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|300912611|ref|ZP_07130054.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|304381625|ref|ZP_07364275.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|147740283|gb|ABQ48581.1| bacterial peptide chain release factor 2 (bRF-2) [Staphylococcus
           aureus subsp. aureus JH9]
 gi|150373735|dbj|BAF66995.1| peptide chain release factor 2, programmed frameshift
           [Staphylococcus aureus subsp. aureus str. Newman]
 gi|253729163|gb|EES97892.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257839034|gb|EEV63513.1| peptide chain release factor 2 [Staphylococcus aureus A9763]
 gi|257849405|gb|EEV73375.1| peptide chain release factor 2 [Staphylococcus aureus A9299]
 gi|257852468|gb|EEV76389.1| peptide chain release factor 2 [Staphylococcus aureus A8115]
 gi|257855360|gb|EEV78298.1| peptide chain release factor 2 [Staphylococcus aureus A6300]
 gi|257857103|gb|EEV80002.1| peptide chain release factor 2 [Staphylococcus aureus A6224]
 gi|257859473|gb|EEV82327.1| peptide chain release factor 2 [Staphylococcus aureus A5948]
 gi|257863860|gb|EEV86616.1| peptide chain release factor 2 [Staphylococcus aureus A5937]
 gi|262074665|gb|ACY10638.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282320044|gb|EFB50391.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           D139]
 gi|282591513|gb|EFB96585.1| peptide chain release factor 2 [Staphylococcus aureus A10102]
 gi|282593709|gb|EFB98701.1| peptide chain release factor 2 [Staphylococcus aureus A9765]
 gi|282762546|gb|EFC02685.1| peptide chain release factor 2 [Staphylococcus aureus A8117]
 gi|283460064|gb|EFC07154.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           H19]
 gi|296886774|gb|EFH25678.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|300886857|gb|EFK82059.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|302332463|gb|ADL22656.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|302750651|gb|ADL64828.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           str. JKD6008]
 gi|304339988|gb|EFM05932.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|315129439|gb|EFT85432.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315196430|gb|EFU26781.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320139911|gb|EFW31772.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|323438713|gb|EGA96454.1| peptide chain release factor 2 [Staphylococcus aureus O11]
 gi|329723780|gb|EGG60308.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           21189]
 gi|329724575|gb|EGG61082.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           21172]
 gi|329729572|gb|EGG65973.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           21193]
          Length = 331

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 159/326 (48%), Positives = 215/326 (65%), Gaps = 1/326 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              +P+ W N  +A+ ++ +   L   ++  K +Q  + D     +L  EE D  + ++ 
Sbjct: 1   MMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              +   K +V+  + + LL G  D+N+A LE+H GAGGTESQDWANML RMY R+ EK+
Sbjct: 61  EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKK 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S
Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180

Query: 209 IWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
             V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH P+G+VV  Q ER
Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNER 240

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KN+  A  ML++KLY+L+L+++          + EIGWG QIRSYV  PY MVKD R
Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAI 353
           TN E      V+DGD+  F+++ L  
Sbjct: 301 TNEETGKVDAVMDGDIGPFIESYLRQ 326


>gi|229175857|ref|ZP_04303355.1| Peptide chain release factor 2 [Bacillus cereus MM3]
 gi|228607590|gb|EEK64914.1| Peptide chain release factor 2 [Bacillus cereus MM3]
          Length = 325

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 164/321 (51%), Positives = 214/321 (66%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
             W +   A+ ++ E   L   +   +++ +   +  I  EL  EE D  + +E    ++
Sbjct: 4   GFWDDQQGAQAVINEANALKEMVGKFRQLDETFENLEITHELLKEEYDEDLHEELESEVK 63

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR FK E
Sbjct: 64  GLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVE 123

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S  V P
Sbjct: 124 TVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVP 183

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             +D +EIEI   D ++DTYRASGAGGQH+NTTDSAVRITH PT  VV CQ ERSQ KN+
Sbjct: 184 EFNDEVEIEIRSEDLKVDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQIKNR 243

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
             A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN E  
Sbjct: 244 EHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVG 303

Query: 334 SPSDVLDGDLDDFMKATLAIK 354
           +   V+DG++D F+ A L  +
Sbjct: 304 NVQAVMDGEIDPFIDAYLRSR 324


>gi|229099612|ref|ZP_04230540.1| Peptide chain release factor 2 [Bacillus cereus Rock3-29]
 gi|229105789|ref|ZP_04236418.1| Peptide chain release factor 2 [Bacillus cereus Rock3-28]
 gi|229118678|ref|ZP_04248030.1| Peptide chain release factor 2 [Bacillus cereus Rock1-3]
 gi|228664870|gb|EEL20360.1| Peptide chain release factor 2 [Bacillus cereus Rock1-3]
 gi|228677678|gb|EEL31926.1| Peptide chain release factor 2 [Bacillus cereus Rock3-28]
 gi|228683908|gb|EEL37858.1| Peptide chain release factor 2 [Bacillus cereus Rock3-29]
          Length = 326

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 163/325 (50%), Positives = 215/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
                 W +   A+ ++ E   L + +   +++ +   +  +  EL  EE D  + +E  
Sbjct: 1   MMGAGFWDDQQGAQTVINEANALKDMVGKFRQLDETFENLEVTHELLKEEYDEDLHEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR 
Sbjct: 61  SEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D +EIE+   D +IDTYRASGAGGQH+NTTDSAVRITH PT  VV CQ ERSQ
Sbjct: 181 EVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+  A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DG++D F+ A L  +
Sbjct: 301 TEVGNVQAVMDGEIDPFIDAYLRSR 325


>gi|314933063|ref|ZP_07840429.1| peptide chain release factor 2 [Staphylococcus caprae C87]
 gi|313654382|gb|EFS18138.1| peptide chain release factor 2 [Staphylococcus caprae C87]
          Length = 333

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 155/327 (47%), Positives = 216/327 (66%), Gaps = 1/327 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              DP  W +  +A+ ++ +   L + ++  +++ + + D     EL  EE D  + +E 
Sbjct: 1   MMADPDFWNDQSKAQEIIDKNNALKSIVNGYRDLANEVDDMSATRELLQEEYDEDMKEEL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
             ++ + K +++  + + LL G  D+N+A  E+H GAGGTESQDWA+MLLRMY R+ E+ 
Sbjct: 61  ESDVIQFKDKMDQFELQLLLDGPHDANNAIFELHPGAGGTESQDWASMLLRMYQRYCEQN 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            F  E ++   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S
Sbjct: 121 GFNVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180

Query: 209 IWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
             V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH P+G+VV  Q ER
Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNER 240

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KN+  A  ML++KLY+ +L ++E         + EIGWG QIRSYV  PY MVKD R
Sbjct: 241 SQIKNREAAMKMLKSKLYQQKLDEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354
           TN E      V+DGD+  F++A L  +
Sbjct: 301 TNEETGKVDAVMDGDIGPFIEAYLRKE 327


>gi|228993892|ref|ZP_04153795.1| Peptide chain release factor 2 [Bacillus pseudomycoides DSM 12442]
 gi|228765843|gb|EEM14494.1| Peptide chain release factor 2 [Bacillus pseudomycoides DSM 12442]
          Length = 327

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 164/325 (50%), Positives = 214/325 (65%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
                 W +   A+ ++ E   L   +   +++ +   +  +  EL  EE D  + +E  
Sbjct: 1   MMGAGFWDDQQGAQTVINEANALKEMVGKFRQLDETFENLEVTHELLKEEYDEDLHEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR 
Sbjct: 61  SEVKSLVREMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK + ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVDTVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D IEIE+   D +IDTYRASGAGGQH+NTTDSAVRITH PT  VV CQ ERSQ
Sbjct: 181 EVVPEFNDDIEIEVRTEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+  A  ML+AKLY+ +L++++   N     + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAQLNEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DG++D F+ A L  +
Sbjct: 301 TEVGNVQAVMDGEIDPFIDAYLRSR 325


>gi|297200074|ref|ZP_06917471.1| peptide chain release factor 2 [Streptomyces sviceus ATCC 29083]
 gi|297147562|gb|EDY54581.2| peptide chain release factor 2 [Streptomyces sviceus ATCC 29083]
          Length = 368

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 158/353 (44%), Positives = 219/353 (62%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW N  EA+ +  +  HL   +     +
Sbjct: 13  LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQAEVRKADAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD   L E    L  +K  ++  +  +LLSGE DS +A + + 
Sbjct: 73  RSRIDDLAVLFEMAEEEDDSDTLAEAESELTSVKKALDEMEVRTLLSGEYDSREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE++ +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQKGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + + PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   +  +  
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAAMDALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT+ E  +P  V +G++D F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTDFEVGNPEAVFNGEIDGFLEAGIRWRK 364


>gi|312884019|ref|ZP_07743736.1| peptide chain release factor RF-2 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368477|gb|EFP96012.1| peptide chain release factor RF-2 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 332

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 173/329 (52%), Positives = 232/329 (70%), Gaps = 1/329 (0%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             +N + E P +W     A+ L +ER  L+  +  I ++   + D   LLELA+EE+D  
Sbjct: 2   EEVNAELEQPDVWNEPERAQALGKERSSLEAVVETIDQLNQGVEDVEGLLELAVEEEDQE 61

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
              E    L  ++ ++E  +F  + SG+ DS+D Y+++ +G+GGTE+QDW +MLLRMY R
Sbjct: 62  TFDEIEPELIELEFKLEKLEFRRMFSGDHDSSDCYIDLQSGSGGTEAQDWTSMLLRMYLR 121

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           WAE + FKTE +E+ +GE AG+K AT+ I G  AYGWL+ E GVHRLVR SP+DS+ RRH
Sbjct: 122 WAEAKGFKTEVIEVSEGEVAGLKGATIKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRH 181

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSF+S ++YP +DD+I+I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQC
Sbjct: 182 TSFASAFIYPEIDDNIQIDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQC 241

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           Q +RSQHKNK QA   LRAKL+ELE+QK+       E +K++IGWG QIRSYVL     +
Sbjct: 242 QNDRSQHKNKDQAMKQLRAKLFELEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRI 300

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           KDLRT IE  +   VLDGDLD F++A+L 
Sbjct: 301 KDLRTGIENRNTQAVLDGDLDKFIEASLK 329


>gi|323441389|gb|EGA99047.1| peptide chain release factor 2 [Staphylococcus aureus O46]
          Length = 331

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 158/326 (48%), Positives = 215/326 (65%), Gaps = 1/326 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              +P+ W N  +A+ ++ +   L   ++  K +Q  + D     +L  EE D  + ++ 
Sbjct: 1   MMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              +   K +V+  + + LL G  D+N+A LE+H GAGGTESQDWANML RMY R+ EK+
Sbjct: 61  EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKK 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            F+ E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S
Sbjct: 121 GFEVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180

Query: 209 IWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
             V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH P+G+VV  Q ER
Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNER 240

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KN+  A  ML++KLY+L+L+++          + EIGWG QIRSYV  PY MVKD R
Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAI 353
           TN E      V+DGD+  F+++ L  
Sbjct: 301 TNEETGKVDAVMDGDIGPFIESYLRQ 326


>gi|311896293|dbj|BAJ28701.1| putative peptide chain release factor 2 [Kitasatospora setae
           KM-6054]
          Length = 351

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 162/349 (46%), Positives = 218/349 (62%), Gaps = 2/349 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           ++ +  + D D     ++ L  +   P LW +V  A+ +      L   +  ++ ++ R+
Sbjct: 1   MSSIEAVLDLDKIRADIATLEEEAAAPTLWDDVANAQKVTSRLSFLQGELRKVETLRGRV 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D  +L ELA  EDD     E    L  ++  VE  +  +LLSGE D+ +A + + A AG
Sbjct: 61  EDLGVLFELAEAEDDADTRTEAEAELVSVQKAVEELEVRTLLSGEYDAREALVNIRAEAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G ++ D+A  L+RMY RWAE+  + TE  +    EEAGIKSAT  +K P AYG L  EQG
Sbjct: 121 GVDAADFAEQLMRMYLRWAERHGYPTEVYDTSYAEEAGIKSATFTVKSPYAYGTLSVEQG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HRLVRISP+D+  RR TSF+ + V PVV+ S  ++I E D RID YRASG GGQ VNTT
Sbjct: 181 THRLVRISPFDNQGRRQTSFAGVEVLPVVETSDHVDIDEGDLRIDVYRASGPGGQGVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTG+VV CQ ERSQ +NKA A N+L+AKL  LE +++EE A +        
Sbjct: 241 DSAVRITHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEERAAMDALKDGGS 298

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            WG Q+RSYVL PYQMVKDLRT  E  +P  VLDGD+D F++A +  +K
Sbjct: 299 SWGNQMRSYVLHPYQMVKDLRTEHEVGNPQGVLDGDIDGFIEAGIRWRK 347


>gi|310644311|ref|YP_003949070.1| protein chain release factor b-like protein [Paenibacillus polymyxa
           SC2]
 gi|309249262|gb|ADO58829.1| Protein chain release factor B-like protein [Paenibacillus polymyxa
           SC2]
          Length = 339

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 164/332 (49%), Positives = 230/332 (69%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           ++    K   P  W +  +A+ ++ E   + +++   ++++    D  +++ELA EE D 
Sbjct: 2   IANFEEKMAAPDFWDDNEKAQGVIAEMNVVKSSVDSYEQLRQEYEDAGMMVELAEEEGDE 61

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
           +++ E  ++++ +  ++E  + + LL+   D  +A LE+H GAGGTESQDW  MLLRMYT
Sbjct: 62  ALVGEVENSIKSLLSKLEEFELQLLLNQPYDKLNAILELHPGAGGTESQDWGQMLLRMYT 121

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           RW EKR FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RR
Sbjct: 122 RWGEKRGFKVETLDYLAGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDSSGRR 181

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSF S  V P + D ++IEI   D +IDTYRASGAGGQH+NTTDSAVRITH+PTG+VV 
Sbjct: 182 HTSFVSCDVVPEIADDVDIEIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGIVVT 241

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
           CQ ERSQ KN+ +A  MLR+KLYE +++++++  +     +++I WG QIRSYV  PY M
Sbjct: 242 CQNERSQIKNRERAMTMLRSKLYERKIEEQQQQLDEIRGEQSDIAWGSQIRSYVFHPYSM 301

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           VKD RT++E  +   V+DGDLD F+   L  +
Sbjct: 302 VKDHRTSVETGNVGAVMDGDLDPFIDGYLRSQ 333


>gi|184154810|ref|YP_001843150.1| peptide chain release factor 2 [Lactobacillus fermentum IFO 3956]
 gi|183226154|dbj|BAG26670.1| peptide chain release factor 2 [Lactobacillus fermentum IFO 3956]
          Length = 355

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 168/347 (48%), Positives = 219/347 (63%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           ++  GGLFD D   + ++    +   P  W +   A+  +     L         +QD++
Sbjct: 1   MHASGGLFDLDALNESIAQGENEMTAPDFWDDNQRAQEKVAALNELKKRRDNFLTLQDQV 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            +  +  E+   E D  +  E  DN   ++  +   + E LL G  D +DA LE+H GAG
Sbjct: 61  EELALTAEMLQAEPDPELKAELDDNFPGVQEHLRAYRLEQLLDGPYDQSDAILEIHPGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW  MLLRMY RWA +  F  E      GEEAGIKS TLLIKG NAYG+L  E+G
Sbjct: 121 GTEAQDWGEMLLRMYMRWANQHGFAVETANYEAGEEAGIKSVTLLIKGHNAYGYLHPEKG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+DS +RRHTSF+S+ V P++D+SIE+EI  SD R+DT+RASGAGGQH+N T
Sbjct: 181 VHRLVRISPFDSAARRHTSFASVDVMPILDESIEVEIDPSDLRVDTFRASGAGGQHINKT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITH+PTG+V   Q ERSQ +N+  A NML++KLYELE +K+ +     E  + EI
Sbjct: 241 ESAVRITHLPTGIVTSSQAERSQLQNRITAMNMLKSKLYELEEEKKAKERAQIEGEQKEI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           GWG QIRSYV  PY +VKD RT  E      V+DGDLD F+ A L  
Sbjct: 301 GWGSQIRSYVFHPYTLVKDARTGYETHDVVGVMDGDLDPFINAYLQW 347


>gi|294791755|ref|ZP_06756903.1| peptide chain release factor 2 [Veillonella sp. 6_1_27]
 gi|294793616|ref|ZP_06758753.1| peptide chain release factor 2 [Veillonella sp. 3_1_44]
 gi|294455186|gb|EFG23558.1| peptide chain release factor 2 [Veillonella sp. 3_1_44]
 gi|294456985|gb|EFG25347.1| peptide chain release factor 2 [Veillonella sp. 6_1_27]
          Length = 330

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 166/325 (51%), Positives = 232/325 (71%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W N  +A+ + +E   L NA+   K++   + D  ++LE+A++EDD S+  E  
Sbjct: 1   MSDPTFWDNPDKAREISQEATQLKNAVESYKQLVSDIEDANMMLEMAIDEDDLSMESEIK 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +++I+  +E ++   LLSGE D+N+A L  HAGAGGTE+QDW +ML+RMY RWAEK  
Sbjct: 61  EYVKQIEETLEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKSG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E ++   G+EAGIKSAT L+KG NA+G+LK E+GVHRLVRISP+D+ +RRHTSF+++
Sbjct: 121 FSIELMDEQPGDEAGIKSATFLVKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD++EI I   D ++DTYRASGAGGQH+N TDSAVR+TH PTG+VVQCQ +RSQ
Sbjct: 181 DVMPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQTQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+ QA  +LRAKL+ELEL+K+ E+      +   I WG QIRSYV  PY +VKD RT+
Sbjct: 241 MQNREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHRTS 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DG+LD F++  L  +
Sbjct: 301 VETGNVQAVMDGNLDPFIEGFLKKE 325


>gi|195952400|ref|YP_002120690.1| peptide chain release factor 2 [Hydrogenobaculum sp. Y04AAS1]
 gi|195932012|gb|ACG56712.1| peptide chain release factor 2 [Hydrogenobaculum sp. Y04AAS1]
          Length = 375

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 171/352 (48%), Positives = 242/352 (68%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + ++   L    D +   + +   +    +P  W +  +AK + ++R+ L + ++    +
Sbjct: 11  IKKRFEELSSSIDEEKIKKEIEKYDQMMSEPDFWSDQEKAKSISQKRKALQDKLNTYTSL 70

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D   ++    EED  + L  +   L+ ++ +++  + E+ LS E D N+AYL + 
Sbjct: 71  KSRIKDLDEMVSELKEEDLDTTLLISE-ELEAVEKDLKKFELETYLSDEMDINNAYLTIQ 129

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLRMYTRWAEK  ++ +  +I+  + AGIKSATL IKGP AYG+LK
Sbjct: 130 AGAGGTEACDWASMLLRMYTRWAEKHGYEVQLTDINPDDVAGIKSATLYIKGPYAYGYLK 189

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N+RRHTSF+S+ V P V++ + IEI E D RIDTYRASGAGGQ+
Sbjct: 190 SENGVHRLVRISPFDANARRHTSFASVLVVPEVNEDVNIEIKEEDLRIDTYRASGAGGQY 249

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TD+AVRITHIPTG+VV CQQERSQ +N+ +A  ML+A+LY+LELQK EE     E  
Sbjct: 250 VNKTDTAVRITHIPTGIVVACQQERSQIQNRRKAMEMLKARLYQLELQKIEEKKKSLEGP 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KT+IGWG +IRSY+ QP Q+VKDLRT  E  +   V+DG++D+F++A L  K
Sbjct: 310 KTDIGWGYKIRSYIFQPSQLVKDLRTGEESGNIEAVMDGEIDNFIEAYLRKK 361


>gi|70727136|ref|YP_254052.1| peptide chain release factor 2 [Staphylococcus haemolyticus
           JCSC1435]
 gi|68447862|dbj|BAE05446.1| peptide chain release factor 2 [Staphylococcus haemolyticus
           JCSC1435]
          Length = 332

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 159/325 (48%), Positives = 218/325 (67%), Gaps = 1/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W +  +A+ ++ +   L + ++   E+++ + D     EL  EE D  +  +  
Sbjct: 1   MTEPDFWDDQNKAQDVIDKNNALKSVVNGYHELEEEVEDMTATWELLQEELDGDVKSDLE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            N+   K +V+  + + LL G  D+N+A LE+H GAGGTESQDWA+MLLRMY R+ E++ 
Sbjct: 61  QNVLDFKEKVDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYGEQQG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S 
Sbjct: 121 FKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180

Query: 210 WVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
            V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ERS
Sbjct: 181 DVIPEFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q KN+  A  ML+AKLY+L+L+++E         + EIGWG QIRSYV  PY MVKD RT
Sbjct: 241 QIKNREAAMKMLKAKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353
           N E      V+DG++  F+++ L  
Sbjct: 301 NEETGKVDAVMDGEIGPFIESYLRY 325


>gi|45656368|ref|YP_000454.1| peptide chain release factor 2 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|59798054|sp|Q72V33|RF2_LEPIC RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|45599602|gb|AAS69091.1| peptide chain release factor 2 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 367

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 166/351 (47%), Positives = 229/351 (65%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L         L + +    RL  L  K EDP+LW N  EA+++ +++  L+  ++    
Sbjct: 15  ELQENFLNRWKLLNLEQDKDRLKSLTEKAEDPNLWNNPEEARLVSQKKNELEKKLNPWFT 74

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           IQ  + D   L++L L+E   + + E S    R++ + E  +    L    D   A+L +
Sbjct: 75  IQQDILDFPDLVDLTLDEKGENGVGELSSEYNRLQEKFEELELLGALKNPEDLKPAFLNI 134

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA MLLRMYTR+ EK+ ++   +++  G+ AGIK+ATL + G  A+G+L
Sbjct: 135 HPGAGGTESQDWAEMLLRMYTRYFEKKGYQYSLIDVQAGDGAGIKNATLHVIGDFAFGFL 194

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE GVHRLVRISP+D+N RRHTSF S+ V P +DD I+I+I E D R+D YR+SGAGGQ
Sbjct: 195 KGENGVHRLVRISPFDANKRRHTSFVSVHVSPEIDDDIDIKIEEKDIRVDVYRSSGAGGQ 254

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+P+G+VV CQ ERSQ KN+  A+ ML+A+LYELE +K +E       
Sbjct: 255 HVNTTDSAVRITHMPSGIVVACQNERSQIKNRDTAFKMLKARLYELEQEKAKEELEKKSG 314

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            K +I WG QIRSYV  PY +VKD RT+ E  + + V+DGD++ F+ A L 
Sbjct: 315 EKKDITWGSQIRSYVFHPYNLVKDHRTDHETGNVAAVMDGDIEPFILAYLK 365


>gi|323140697|ref|ZP_08075618.1| peptide chain release factor 2 [Phascolarctobacterium sp. YIT
           12067]
 gi|322414821|gb|EFY05619.1| peptide chain release factor 2 [Phascolarctobacterium sp. YIT
           12067]
          Length = 329

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 158/326 (48%), Positives = 222/326 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+   ++   L   +    ++   + D   L E+A EE+D S+L E  
Sbjct: 1   MGDPTFWDDPEKAQKTAQDVNSLKEEVDGFHKLSAGVDDLEALQEMAAEENDESLLPEMD 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L + + E+E+ +   LLSGE D+N+A L +HAGAGGTE+QDW +MLLRM+TR+AE+  
Sbjct: 61  ELLAKCRSELEHLELGMLLSGEYDANNAILTLHAGAGGTEAQDWTSMLLRMFTRFAEQNG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L+   G+EAG+KSAT+ + G NAYG+L+ E+GVHRLVRISP+D+N+RRHTSF+++
Sbjct: 121 FALEMLDYQPGDEAGVKSATIQVNGHNAYGFLRSEKGVHRLVRISPFDANARRHTSFAAV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD++++ I+  + R+D YR+SGAGGQHVN T SAVR+TH PTG+VVQCQ ERSQ
Sbjct: 181 DVMPELDDTVDVNINMDEVRVDVYRSSGAGGQHVNKTSSAVRMTHEPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+ +   MLRAKLYE E  K++ + +        I WG QIRSYV QPY MVKD RT 
Sbjct: 241 IQNRERCLQMLRAKLYEYEKAKQDALVSDIAGDYQNIEWGSQIRSYVFQPYTMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355
            E  +   V+DGDL  F++A L  ++
Sbjct: 301 CETGNIQAVMDGDLMPFVEAYLRSQQ 326


>gi|222148341|ref|YP_002549298.1| peptide chain release factor 2 [Agrobacterium vitis S4]
 gi|221735329|gb|ACM36292.1| peptide chain release factor 2 [Agrobacterium vitis S4]
          Length = 344

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 230/329 (69%), Positives = 280/329 (85%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           LN K EDP+LW +  EA+ LMRERQ L+++I+ ++ ++ ++ DN+ L+E+  EE D SI+
Sbjct: 4   LNNKAEDPNLWNDAAEAQKLMRERQQLEDSIAGVRRLEQQMKDNIELIEMGEEEGDESIV 63

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E  D L+ +K E    Q E++LSGEAD ND Y+EVH+GAGGTESQDWANMLLRMYTRWA
Sbjct: 64  KEAEDGLKALKAESGKLQVEAMLSGEADGNDTYVEVHSGAGGTESQDWANMLLRMYTRWA 123

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+  FK E LE+HDGEEAGIKSAT+L+KG NAYGW+K E GVHRLVRISPYDSN+RRHTS
Sbjct: 124 ERSGFKVELLEVHDGEEAGIKSATILVKGHNAYGWMKTESGVHRLVRISPYDSNARRHTS 183

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FSSIWVYPVVDDSI+I+I+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIP+G+ V CQQ
Sbjct: 184 FSSIWVYPVVDDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPSGIAVSCQQ 243

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQHKNKA+AW+MLRA+LYE+EL+KREE AN   +SKT+IGWG QIRSYVLQPYQ+VKD
Sbjct: 244 ERSQHKNKAKAWDMLRARLYEVELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKD 303

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           LRT +E T+P DVL+GD+  FM+A LA +
Sbjct: 304 LRTGVESTAPDDVLNGDISPFMEAALAHR 332


>gi|256375089|ref|YP_003098749.1| peptide chain release factor 2 [Actinosynnema mirum DSM 43827]
 gi|255919392|gb|ACU34903.1| peptide chain release factor 2 [Actinosynnema mirum DSM 43827]
          Length = 367

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 161/353 (45%), Positives = 222/353 (62%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  L  +  + D D    +++ L  +   P LW +  +A+ +  +  H    +  +  +
Sbjct: 12  LSATLASIEAVMDLDALRAQVAELEEQAARPDLWDDQEKAQRVTSQLSHKQGELRRVTAL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L ELA +E D     E      +++ E+   +  +LLSGE D+ DA + V 
Sbjct: 72  RGRLDDLGVLYELAEDEGDEGSAAEADTERAKLREEISSLEVRTLLSGEYDARDALVTVR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A MLLRMY+RWAE+  +  +  +    EEAGIKSAT  +  P AYG L 
Sbjct: 132 AEAGGVDAADFAEMLLRMYSRWAERHNYAVDVFDTSYAEEAGIKSATFRVTAPYAYGTLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  +EI E + R+D YR+SG GGQ 
Sbjct: 192 VEQGTHRLVRISPFDNQGRRQTSFAGVEVVPVVEQTDHVEIDEKELRVDVYRSSGPGGQG 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A  +L+AKL  LE Q++EE A +    
Sbjct: 252 VNTTDSAVRLTHIPTGIVVSCQNERSQLQNKATAMAVLQAKL--LERQRQEEQAKMDALK 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +   WG Q+RSYVL PYQMVKDLRT  E  +PS VLDG++DDF++A +  +K
Sbjct: 310 DSGSSWGNQMRSYVLHPYQMVKDLRTEHEVGNPSAVLDGEIDDFLEAGIRWRK 362


>gi|242242124|ref|ZP_04796569.1| peptide chain release factor 2 [Staphylococcus epidermidis W23144]
 gi|242234437|gb|EES36749.1| peptide chain release factor 2 [Staphylococcus epidermidis W23144]
          Length = 332

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 158/326 (48%), Positives = 220/326 (67%), Gaps = 1/326 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ ++ +   L + +S   ++ + + D     EL  EE D  + +E  
Sbjct: 1   MTDPDFWNDQTKAQDIIDKNNALKSIVSGYYQLTNAVDDMSATRELLQEEYDEDMKKELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +Q+ + +++  + + LL G  D+N+A LE+H GAGGTESQDWA MLLRMY R+ E+  
Sbjct: 61  EEVQQFEEQIDQYELQLLLDGPHDANNAILELHPGAGGTESQDWAGMLLRMYQRYCEQNG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S 
Sbjct: 121 FKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180

Query: 210 WVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
            V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ERS
Sbjct: 181 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q KN+  A  ML++KLY+L+L+++E+        + +IGWG QIRSYV  PY MVKD RT
Sbjct: 241 QIKNREAAMKMLKSKLYQLKLEEQEQEMAEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
           N E      V+DG++  F++A L  +
Sbjct: 301 NEETGKVDAVMDGEIGPFIEAYLRKE 326


>gi|238019424|ref|ZP_04599850.1| hypothetical protein VEIDISOL_01293 [Veillonella dispar ATCC 17748]
 gi|237864123|gb|EEP65413.1| hypothetical protein VEIDISOL_01293 [Veillonella dispar ATCC 17748]
          Length = 330

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 170/325 (52%), Positives = 230/325 (70%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ + +E   L NA+   K++   + D  ++LE+A+EEDD S+  E  
Sbjct: 1   MSDPTFWDDPDKAREISQEATQLKNAVESYKQLVSDIEDANVMLEMAIEEDDRSLEGEIK 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           D +Q+I+  VE ++   LLSGE D+N+A L  HAGAGGTE+QDW +ML+RMY RWAEK  
Sbjct: 61  DYVQQIEETVEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKAG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E ++   G+EAG KSAT LIKG NA+G+LK E+GVHRLVRISP+D+ +RRHTSF+++
Sbjct: 121 FSIELMDEQPGDEAGTKSATFLIKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD++EI I   D ++DTYRASGAGGQH+N TDSAVR+TH PTG+VVQCQ +RSQ
Sbjct: 181 DVMPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHRPTGIVVQCQTQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+ QA  +LRAKL+ELEL+K+ E+      +   I WG QIRSYV  PY +VKD RT 
Sbjct: 241 MQNREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DG+LD FM+  L  +
Sbjct: 301 VETGNVQSVMDGNLDQFMEGFLKKE 325


>gi|291445100|ref|ZP_06584490.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL
           15998]
 gi|291348047|gb|EFE74951.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL
           15998]
          Length = 368

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 155/353 (43%), Positives = 215/353 (60%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMGSIEAVLDLDALRADIAALEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA  E D     E    L+ +K  ++  +  +LLSGE D+ +A + + 
Sbjct: 73  RGRIDDLEVLFELAEAEGDADAQAEAETELESVKKALDEMEVRTLLSGEYDAREALVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHNYKTEVYETAYAEEAGIKSTTFAVQVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   N  +  
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMNALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEFEMGNPEAVFNGEIDGFVEAGIRWRK 364


>gi|319401169|gb|EFV89384.1| peptide chain release factor 2 [Staphylococcus epidermidis FRI909]
          Length = 332

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 158/326 (48%), Positives = 221/326 (67%), Gaps = 1/326 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ ++ +   L + +S   ++ + + D     EL  EE D  + +E  
Sbjct: 1   MTDPDFWNDQTKAQDIIDKNNALKSIVSGYYQLTNAVDDMSATRELLQEEYDEDMKKELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +Q+ + +++  + + LL G  D+N+A LE+H GAGGTESQDWA+MLLRMY R+ E+  
Sbjct: 61  EEVQQFEEQIDQYELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYCEQNG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S 
Sbjct: 121 FKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180

Query: 210 WVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
            V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ERS
Sbjct: 181 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q KN+  A  ML++KLY+L+L+++E+        + +IGWG QIRSYV  PY MVKD RT
Sbjct: 241 QIKNREAAMKMLKSKLYQLKLEEQEQEMAEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
           N E      V+DG++  F++A L  +
Sbjct: 301 NEETGKVDAVMDGEIGPFIEAYLRKE 326


>gi|88607366|ref|YP_505078.1| peptide chain release factor 2, programmed frameshift [Anaplasma
           phagocytophilum HZ]
 gi|88598429|gb|ABD43899.1| peptide chain release factor 2 [Anaplasma phagocytophilum HZ]
          Length = 376

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 168/352 (47%), Positives = 232/352 (65%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   L  +    D       L  L+ +   P LW +  +AK L+ ER  +   ++  + 
Sbjct: 13  EIGEDLASIARCLDIVGLESTLESLDLECSSPSLWDDAEKAKSLLSERSRVSAVLTSFRV 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++    D   L E+  + DD   L   +  LQ +KL +  K+ E + S EAD+N  +L +
Sbjct: 73  LEKEHKDLAELAEMISDSDDRDFLATINAELQSLKLRISQKKTECMFSHEADANSCFLTI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
            +GAGGTES DW  MLLRMYT+WAE   +F  E ++  DGEE G+K+ T+ I G  AYGW
Sbjct: 133 RSGAGGTESSDWVCMLLRMYTKWAESFHEFTVETVDSVDGEETGLKAVTVKICGIGAYGW 192

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
            + E G+HRLVRISP+D  ++RHTSF+S+ V PVVD  I+I+I E D RIDTYRASGAGG
Sbjct: 193 ARTESGIHRLVRISPFDHAAKRHTSFASVEVSPVVDHEIDIKILEKDLRIDTYRASGAGG 252

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVN T+SAVRITHIP+G+VVQCQ  RSQH+N+A+A+++L+++LYE+ELQ++E+      
Sbjct: 253 QHVNKTESAVRITHIPSGMVVQCQTSRSQHQNRAEAYSLLKSRLYEMELQEKEKRMAQDH 312

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +K EIGWG QIRSYV+ PY+MVKDLRT  E  +   V++GDLD F+ A L 
Sbjct: 313 QNKCEIGWGHQIRSYVMHPYRMVKDLRTGHETGNVDAVMNGDLDAFITAALM 364


>gi|282903384|ref|ZP_06311275.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           C160]
 gi|282596339|gb|EFC01300.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           C160]
          Length = 331

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 159/326 (48%), Positives = 215/326 (65%), Gaps = 1/326 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              +P+ W N  +A+ ++ +   L   ++  K +Q  + D     +L  EE D  + ++ 
Sbjct: 1   MMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDGEMKEDL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              +   K +V+  + + LL G  D+N+A LE+H GAGGTESQDWANML RMY R+ EK+
Sbjct: 61  EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKK 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S
Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180

Query: 209 IWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
             V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH P+G+VV  Q ER
Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNER 240

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KN+  A  ML++KLY+L+L+++          + EIGWG QIRSYV  PY MVKD R
Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAI 353
           TN E      V+DGD+  F+++ L  
Sbjct: 301 TNEETGKVDAVMDGDVGPFIESYLRQ 326


>gi|257785087|ref|YP_003180304.1| peptide chain release factor 2 [Atopobium parvulum DSM 20469]
 gi|257473594|gb|ACV51713.1| peptide chain release factor 2 [Atopobium parvulum DSM 20469]
          Length = 369

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 149/352 (42%), Positives = 206/352 (58%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +L  + G        Q++S L  ++  P+ W +   A+ +M +   L + ++ I   
Sbjct: 12  LAERLFEIEGYLHLAEKRQQISELEAESARPNFWDDAEAAQKIMTQLASLRDDVAGIDRA 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +++L D     EL  E  D +   E+      ++ ++   +  S  + E D  DA + + 
Sbjct: 72  KEKLGDAEAAFELGTELGDQASFDESRALAVSLEKDLSELELSSWFTDELDHGDAIVTIK 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            G GG ESQDW  ML  MY ++ ++R +K +  +    E  G+  AT  + G NAYG L+
Sbjct: 132 PGQGGLESQDWCEMLFHMYLKYCDRRGWKVDINDAPAAEVIGLDRATFTVSGKNAYGMLR 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQGVHRLVRISP D   RR TSF+ + V PV+ + IE++I  +D RID Y ASG GGQ 
Sbjct: 192 AEQGVHRLVRISPTDDKKRRQTSFAGVEVLPVLPEDIEVDIDPNDLRIDVYHASGPGGQG 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG VV CQ ERSQ +NKA A N+LR++LYE+E +KRE   +     
Sbjct: 252 VNTTDSAVRITHIPTGTVVTCQNERSQLQNKAAAMNILRSRLYEIEKEKREAELDELRGP 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAI 353
           K EI +G QIRSYVL PYQ++KDLRT  E  +   V  DGDLD F+ A    
Sbjct: 312 KREISFGNQIRSYVLYPYQLIKDLRTGAETGNVESVFSDGDLDQFIIAYHRW 363


>gi|116051698|ref|YP_789463.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|115586919|gb|ABJ12934.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 332

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 180/329 (54%), Positives = 240/329 (72%), Gaps = 1/329 (0%)

Query: 25  FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84
            +N + EDP++W N   A+ L RER  L   +  + ++   L D+  LL++A+EEDD   
Sbjct: 3   EVNRELEDPNVWNNPEYAQNLGRERAQLAQVVETLDDLTSGLADSRDLLDMAVEEDDEGA 62

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           + + ++ ++R++  +E  +F  + SGE D N+AYL++ AG+GGTE+QDWANMLLRMY RW
Sbjct: 63  VDDVANEVERLREILEKLEFRRMFSGEMDPNNAYLDIQAGSGGTEAQDWANMLLRMYLRW 122

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           A+K  F    +E+ +GE AGIK AT+ IKG  A+GWL+ E GVHRLVR SP+DS +RRHT
Sbjct: 123 ADKHGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHT 182

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           SF++++V P +DD+IEIEI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ
Sbjct: 183 SFTAVFVSPEIDDNIEIEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQ 242

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
            ERSQH NK  A  MLRAKLYELE+QKR   +   E SK++IGWG QIRSYVL     +K
Sbjct: 243 NERSQHANKDTAMKMLRAKLYELEMQKRTAASQALEDSKSDIGWGHQIRSYVLD-QSRIK 301

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           DLRT IE++    VLDGDLD++++A+L  
Sbjct: 302 DLRTGIERSDCDKVLDGDLDEYLEASLKQ 330


>gi|302544934|ref|ZP_07297276.1| peptide chain release factor 2 [Streptomyces hygroscopicus ATCC
           53653]
 gi|302462552|gb|EFL25645.1| peptide chain release factor 2 [Streptomyces himastatinicus ATCC
           53653]
          Length = 370

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 157/353 (44%), Positives = 217/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  +L   +   +E+
Sbjct: 13  LSSTMGSIEAVLDLDKMRADIAVLEEQAAAPSLWDDPENAQKVTSKLSYLQGHLRRAEEL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA +E D     E    L  ++  V+  +  +LLSGE D+ +A + + 
Sbjct: 73  RGRIDDLEVLFELAADEGDEDARAEAEAELNAVRKAVDEMEVRTLLSGEYDAREAVVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEQLQRMYLRWAERHGYKTEIYETSYAEEAGIKSTTFAVQIPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ RID YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRIDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ ERSQ +N+A A N+L+AKL +   Q+ +   +  +  
Sbjct: 253 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNRATAMNVLQAKLLDRRRQEEQAKMDALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  VLDG+LD F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGELDGFLEAGIRWRK 364


>gi|269128206|ref|YP_003301576.1| peptide chain release factor 2 [Thermomonospora curvata DSM 43183]
 gi|268313164|gb|ACY99538.1| peptide chain release factor 2 [Thermomonospora curvata DSM 43183]
          Length = 378

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 159/354 (44%), Positives = 222/354 (62%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D D     ++ L  ++ DP LW +   A+ + R   +L+N ++ +  
Sbjct: 12  ELGSTLTGIEAVLDLDAMRAEIAKLREESADPDLWSDQERAQQVTRRLSYLENELNRVTS 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D   L ELA E DD     E    L+ ++ +++  +  +L+SGE D  +A + +
Sbjct: 72  LRQRLEDVATLYELAEEMDDADTRAEADAELESLRKDIQQLEVRTLMSGEYDHREALITI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +A AGG ++ DWA  L RMY RWAE+  + TE  E    EEAGIKS T  +K P AYG L
Sbjct: 132 NAQAGGVDAADWAQQLQRMYLRWAERHGYPTEIYETSYAEEAGIKSTTFAVKAPYAYGTL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           +GE G HRLVRISP+D+  RR TSF+ + V PVV+ S  +E+ E+D RID YR+SG GGQ
Sbjct: 192 RGEHGTHRLVRISPFDNQGRRQTSFAGLDVVPVVEQSDHVEVDENDLRIDVYRSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITHIPTG+VV CQ ERSQ +NKA A  +L+AKL E + Q+          
Sbjct: 252 GVNTTDSAVRITHIPTGIVVSCQNERSQLQNKATAMAVLKAKLLERKRQEEAAKMADLRG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             T   WG QIR+YVL PYQ+VKDLRT +E  +P+ VLDG++D+F++A +   +
Sbjct: 312 EGTS-SWGTQIRNYVLHPYQIVKDLRTGVESGNPAAVLDGEIDEFIEAEIRWLR 364


>gi|303241850|ref|ZP_07328345.1| peptide chain release factor 2 [Acetivibrio cellulolyticus CD2]
 gi|302590625|gb|EFL60378.1| peptide chain release factor 2 [Acetivibrio cellulolyticus CD2]
          Length = 340

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 160/329 (48%), Positives = 221/329 (67%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           +  L  K  +P  W ++  ++ ++++ + +   +     +     D   L EL LEEDD 
Sbjct: 5   IEELEQKASEPDFWNDIENSQKVLQKIKTMKEKLERYNRLTQEWEDAKTLCELGLEEDDE 64

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
           S+  E  D+ ++ K + E  + E+LL G  D N+A L +HAGAGGTE+QDW  MLLRM+T
Sbjct: 65  SVFTEVEDSFKKFKKDFEELRLETLLIGPYDKNNAILTLHAGAGGTEAQDWVQMLLRMFT 124

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           RW E + F    L+  DGEEAGIKS T+ + G NAYG+LK E+GVHRLVRISP+D++ RR
Sbjct: 125 RWGESKGFTVRILDYLDGEEAGIKSVTINVIGENAYGYLKSEKGVHRLVRISPFDASGRR 184

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSF+S  V P + D +E+ I+  D RIDTYRASGAGGQH+N T+SA+RITHIPTGVVV 
Sbjct: 185 HTSFASCDVMPELSDDVEVNINPDDLRIDTYRASGAGGQHINKTESAIRITHIPTGVVVA 244

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
           CQ ERSQ +NK  A  ML++KL E++ ++++E     +  + +I WG QIRSYV  PY +
Sbjct: 245 CQTERSQFQNKDTAMRMLKSKLLEIKEREQKEKIEDLKGIQMDIAWGSQIRSYVFCPYTL 304

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           VKD RTN E+ +  +V+DGDLD F+ + L
Sbjct: 305 VKDHRTNYEQINVDNVMDGDLDGFINSYL 333


>gi|126434177|ref|YP_001069868.1| peptide chain release factor 2 [Mycobacterium sp. JLS]
 gi|166225109|sp|A3PWV0|RF2_MYCSJ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|126233977|gb|ABN97377.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp.
           JLS]
          Length = 371

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 159/357 (44%), Positives = 226/357 (63%), Gaps = 8/357 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+  L  +  + D D    R+  L  +  DP+LW +   A+ +  E  H  N +  ++E+
Sbjct: 12  LAATLTTVERVLDVDGLRDRIQKLEQEASDPNLWDDQSRAQKVTSELSHAQNELRRVEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQ---ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + R+ D  +L E+A EE+         E    L ++++++E  +  +LLSGE D  +A +
Sbjct: 72  RQRVEDLPVLYEMAAEEEGQDAENAGAEADAELAKLRVDIEAMEVRTLLSGEYDEREAVV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+  +  E  +    EEAGIKSAT  +  P AYG
Sbjct: 132 TIRSGAGGVDAADWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I++ E+D R+D YR+SG G
Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDVPETDLRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL     +K++E     
Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKLLA---RKKQEERAAL 308

Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           ++ K + G  WG Q+RSYVL PYQMVKDLRT  E  +PS VLDGD+D F++A +  +
Sbjct: 309 DALKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPSAVLDGDIDGFLEAGIRWR 365


>gi|89068846|ref|ZP_01156229.1| peptide chain release factor 2 [Oceanicola granulosus HTCC2516]
 gi|89045616|gb|EAR51679.1| peptide chain release factor 2 [Oceanicola granulosus HTCC2516]
          Length = 374

 Score =  263 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 193/351 (54%), Positives = 237/351 (67%), Gaps = 2/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  L    D + A  RL   N + EDP LW +   A+ LMRERQ L ++I     I
Sbjct: 12  IEKSLALLAQRMDRETAPHRLEEFNARVEDPTLWDDPAAAQKLMRERQALVDSIETYDGI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN+ L+EL   EDD  ++ E    L  +K     K+ E+LL GEAD ND +LE++
Sbjct: 72  ARELADNVELIELGEMEDDSEVVAEAEAALAALKERAAQKELEALLDGEADGNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA ML RMY RWAEKR +K E      G EAGIKS +  I GPNAYGWLK
Sbjct: 132 AGAGGTEACDWAQMLQRMYVRWAEKRGYKVELQSEEAGTEAGIKSVSYKISGPNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+   +R  TSF+S+WVYPVVDD+IEIEI+ S+ R+DTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPFGKGTR-ETSFASVWVYPVVDDNIEIEINPSEIRLDTYRSSGAGGQH 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV    E+SQH+N+  A   L+++LY++EL +R    N    +
Sbjct: 251 VNTTDSAVRITHLPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQMELDRRTADINAAHEA 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K   GWG QIRSYVLQPYQMVKDLRT  E +    VLDG LD FM ATLA+
Sbjct: 310 KGSAGWGNQIRSYVLQPYQMVKDLRTGHETSDTGGVLDGALDGFMAATLAM 360


>gi|182438348|ref|YP_001826067.1| peptide chain release factor 2 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326778999|ref|ZP_08238264.1| Peptide chain release factor 2 [Streptomyces cf. griseus XylebKG-1]
 gi|238688991|sp|B1VV08|RF2_STRGG RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|178466864|dbj|BAG21384.1| putative peptide chain release factor 2 [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326659332|gb|EGE44178.1| Peptide chain release factor 2 [Streptomyces cf. griseus XylebKG-1]
          Length = 368

 Score =  263 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 154/353 (43%), Positives = 216/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMGSIEAVLDLDALRADIAALEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAETL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA +E D     E    L+ ++  ++  +  +LLSGE D+ +A + + 
Sbjct: 73  RGRIDDLEVLFELAADEGDADAQAEAEAELESVRKALDEMEVRTLLSGEYDAREALVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHNYKTEVYETAYAEEAGIKSTTFAVQVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   N  +  
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMNALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEFEMGNPEAVFNGEIDGFVEAGIRWRK 364


>gi|27467454|ref|NP_764091.1| peptide chain release factor RF-2 [Staphylococcus epidermidis ATCC
           12228]
 gi|251810188|ref|ZP_04824661.1| peptide chain release factor 2 [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|293368216|ref|ZP_06614845.1| peptide chain release factor RF2 [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|27314997|gb|AAO04133.1|AE016745_232 peptide chain release factor RF-2 [Staphylococcus epidermidis ATCC
           12228]
 gi|251806240|gb|EES58897.1| peptide chain release factor 2 [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|291317639|gb|EFE58056.1| peptide chain release factor RF2 [Staphylococcus epidermidis
           M23864:W2(grey)]
          Length = 332

 Score =  263 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 155/326 (47%), Positives = 219/326 (67%), Gaps = 1/326 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ ++ +   L + ++   ++ + + D     EL  EE D  +  E  
Sbjct: 1   MTDPDFWNDQTKAQDIIDKNNALKSIVNGYYQLTNAVDDMSATRELLQEEYDEDMKIELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +Q+ + +++  + + LL G  D+N+A LE+H GAGGTESQDW +MLLRMY R+ E+  
Sbjct: 61  EEVQQFEEQIDQYELQLLLDGPHDANNAILELHPGAGGTESQDWVSMLLRMYQRYCEQNG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S 
Sbjct: 121 FKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180

Query: 210 WVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
            V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ERS
Sbjct: 181 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q KN+  A  ML++KLY+L+L+++E+        + +IGWG QIRSYV  PY M+KD RT
Sbjct: 241 QIKNREAAMKMLKSKLYQLKLEEQEQEMAEIRGEQKDIGWGSQIRSYVFHPYSMIKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
           N E      V+DG++  F++A L  +
Sbjct: 301 NEETGKVDAVMDGEIGPFIEAYLRKE 326


>gi|315649817|ref|ZP_07902900.1| peptide chain release factor 2 [Paenibacillus vortex V453]
 gi|315274791|gb|EFU38172.1| peptide chain release factor 2 [Paenibacillus vortex V453]
          Length = 339

 Score =  263 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 169/332 (50%), Positives = 224/332 (67%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           +     K   P  W +  +A+ L+ E   + +++   +++Q    D +++ ELA EE D 
Sbjct: 2   IENFEEKMAAPDFWDDNEKAQALIAEMNAVKSSVDQYQKLQQDYDDAVVMTELADEEGDD 61

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
           S+  E  + ++ +   VE  + + LL+   D  +A LE+H GAGGTESQDW  ML RMYT
Sbjct: 62  SLAGEIGETIKDLVKRVEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLHRMYT 121

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           RWAEKR FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RR
Sbjct: 122 RWAEKRGFKVETLDYLPGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDSSGRR 181

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSF S  V P ++D IE++I   D +IDTYRASGAGGQH+NTTDSAVRITH+PTGVVV 
Sbjct: 182 HTSFVSCDVVPEINDEIELDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGVVVT 241

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
           CQ ERSQ KN+ +A  MLR+KLYE +++++++        ++EI WG QIRSYV  PY M
Sbjct: 242 CQNERSQIKNRERAMTMLRSKLYERKIEEQKKELAEIRGEQSEIAWGSQIRSYVFHPYSM 301

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            KD RT +E  +   V+DGDLD F+   L  +
Sbjct: 302 AKDHRTQVETGNIGAVMDGDLDAFIDGYLRSQ 333


>gi|282875665|ref|ZP_06284536.1| peptide chain release factor 2 [Staphylococcus epidermidis SK135]
 gi|281295692|gb|EFA88215.1| peptide chain release factor 2 [Staphylococcus epidermidis SK135]
 gi|329723235|gb|EGG59765.1| peptide chain release factor 2 [Staphylococcus epidermidis VCU144]
 gi|329736827|gb|EGG73092.1| peptide chain release factor 2 [Staphylococcus epidermidis VCU028]
 gi|329737925|gb|EGG74149.1| peptide chain release factor 2 [Staphylococcus epidermidis VCU045]
          Length = 333

 Score =  263 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 155/327 (47%), Positives = 219/327 (66%), Gaps = 1/327 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              DP  W +  +A+ ++ +   L + ++   ++ + + D     EL  EE D  +  E 
Sbjct: 1   MMTDPDFWNDQTKAQDIIDKNNALKSIVNGYYQLTNAVDDMSATRELLQEEYDEDMKIEL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            + +Q+ + +++  + + LL G  D+N+A LE+H GAGGTESQDW +MLLRMY R+ E+ 
Sbjct: 61  EEEVQQFEEQIDQYELQLLLDGPHDANNAILELHPGAGGTESQDWVSMLLRMYQRYCEQN 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E ++   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S
Sbjct: 121 GFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180

Query: 209 IWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
             V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ER
Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KN+  A  ML++KLY+L+L+++E+        + +IGWG QIRSYV  PY M+KD R
Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQEQEMAEIRGEQKDIGWGSQIRSYVFHPYSMIKDHR 300

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354
           TN E      V+DG++  F++A L  +
Sbjct: 301 TNEETGKVDAVMDGEIGPFIEAYLRKE 327


>gi|116329128|ref|YP_798848.1| peptide chain release factor 2 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116330263|ref|YP_799981.1| peptide chain release factor 2 [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122281974|sp|Q04V47|RF2_LEPBJ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|122283090|sp|Q04YD0|RF2_LEPBL RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|116121872|gb|ABJ79915.1| Peptide chain release factor 2 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116123952|gb|ABJ75223.1| Peptide chain release factor 2 [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 367

 Score =  263 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 165/351 (47%), Positives = 228/351 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L         L + +    RL  LN K+EDP LW N  EA+++ +++  L+  ++    
Sbjct: 15  ELQENFLNRWKLLNLEQDKDRLKALNEKSEDPDLWNNPEEARIVSQKKNELEKKLTPWFT 74

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           IQ  + D   L+EL L+E   + + E S    R++ + E  +    L    D   A+L +
Sbjct: 75  IQQDILDFPDLVELTLDEKGENGIGELSMEYNRLQEKFEELELLGALKNSEDLKPAFLNI 134

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA MLLRMY R+ EK+ ++   ++I  G+ AGIK+ TL + G  A+G+L
Sbjct: 135 HPGAGGTESQDWAEMLLRMYIRYFEKKGYQYSLIDIQAGDGAGIKNVTLHVVGDFAFGFL 194

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE G+HRLVRISP+D+N RRHTSF S+ V P +DD I+I+I E D R+D YR+SGAGGQ
Sbjct: 195 KGENGIHRLVRISPFDANKRRHTSFVSVHVSPEIDDEIDIKIEEKDIRVDVYRSSGAGGQ 254

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+P+G+VV CQ ERSQ KN+  A+ ML+A+LYE+E +K +E       
Sbjct: 255 HVNTTDSAVRITHLPSGIVVACQNERSQIKNRDTAFKMLKARLYEMEQEKAKEELEKKSG 314

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            K +I WG QIRSYV  PY +VKD RT+ E  + + V+DGD++ F+ A L 
Sbjct: 315 EKKDIAWGSQIRSYVFHPYNLVKDHRTDHETGNVAAVMDGDIEPFILAYLK 365


>gi|261367680|ref|ZP_05980563.1| peptide chain release factor 2 [Subdoligranulum variabile DSM
           15176]
 gi|282570473|gb|EFB76008.1| peptide chain release factor 2 [Subdoligranulum variabile DSM
           15176]
          Length = 373

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 153/351 (43%), Positives = 228/351 (64%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +   ++ L      + + +RL+ L  +   P  + +  +++ ++ E   + N +    ++
Sbjct: 14  MKTSVDDLRDALSIEASEKRLAELEHQMTLPGFYDDQEKSQRVISEMGEVKNKLERFGKL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  +   LLE+  EE+D S+  E    ++ ++  ++  Q  ++L+GE D N+A L  H
Sbjct: 74  STQYEEAETLLEMIEEENDPSLASEGEQAVEGVEKAIDELQLMTMLNGEYDHNNAILTFH 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG GGTE+QDWA ML RMYTRWAE   +  E L++ DG+EAGIKSA+++IKG NAYG LK
Sbjct: 134 AGTGGTEAQDWAEMLYRMYTRWAEAHGYSVEVLDVLDGDEAGIKSASMMIKGANAYGMLK 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N+RR TSF+S+ V P ++D+I+IEI+ +D  +  YR+SGAGGQH
Sbjct: 194 SEHGVHRLVRISPFDANARRQTSFASLEVMPELNDNIQIEINPADIEMQVYRSSGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T SAVR+ H PTG+V  CQ +RSQ +N+  A  M++AKLY++ LQ+ ++  +  +  
Sbjct: 254 INKTSSAVRLIHKPTGIVTSCQTQRSQLQNREYAMEMMKAKLYQIALQQHKDKIDDIKGV 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           + EI WG QIRSYV  PY +VKD RTN E  +   V+DGDLD F+ A L  
Sbjct: 314 QNEIAWGHQIRSYVFMPYTLVKDHRTNYESGNVQAVMDGDLDGFIYAYLKA 364


>gi|218660225|ref|ZP_03516155.1| peptide chain release factor 2 [Rhizobium etli IE4771]
          Length = 350

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 237/328 (72%), Positives = 284/328 (86%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
           N K EDP+LW +  EA+ LMRERQ LD+ I+ +K+++ +L DN+ L+EL  EE D S+++
Sbjct: 2   NNKAEDPNLWNDASEAQKLMRERQQLDDGINGVKQLEQQLNDNIELIELGEEEGDQSVVK 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E  D L+ +K E   +Q E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWAE
Sbjct: 62  EAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWAE 121

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           +++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSF
Sbjct: 122 RQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSF 181

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           SSIWVYPVVDDSI+IEI+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VVQCQQE
Sbjct: 182 SSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQE 241

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQHKN+A+AW+MLRA++YE EL+KRE+ AN   +SKT+IGWG QIRSYVLQPYQ+VKDL
Sbjct: 242 RSQHKNRAKAWDMLRARMYEAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKDL 301

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           RT +  T+P DVLDGDL++FM+A LA +
Sbjct: 302 RTGVASTAPDDVLDGDLNEFMEAALAHR 329


>gi|258651861|ref|YP_003201017.1| peptide chain release factor 2 [Nakamurella multipartita DSM 44233]
 gi|258555086|gb|ACV78028.1| peptide chain release factor 2 [Nakamurella multipartita DSM 44233]
          Length = 369

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 156/353 (44%), Positives = 220/353 (62%), Gaps = 4/353 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D   + +  L+     P LW +   A+ +     H    +  IK++
Sbjct: 12  LDTTLTSIEKVMDVDRLARSIDELSEAASAPDLWNDQENAQKVTSRLSHAQAELKRIKDL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L EL   ++D     E    L  ++ E++ ++  +LLSGE D  +A + + 
Sbjct: 72  RQRLDDLEVLFEL--GDEDPDTYLEAQQELLGLQKEIDAQEVRTLLSGEYDEREALVTIR 129

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A ML+RMY RW+E+  + TE  +    EEAGIKS T  +K P AYG L 
Sbjct: 130 SEAGGVDAADFAEMLMRMYLRWSERHGYNTEVYDTSYAEEAGIKSTTFQVKAPYAYGTLS 189

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ S  +++ E D R+D YR+SG GGQ 
Sbjct: 190 VEQGTHRLVRISPFDNQGRRQTSFAGVEVAPVVETSDHVDVDEKDLRVDVYRSSGPGGQG 249

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A  +L++KL  LE +++EE A +    
Sbjct: 250 VNTTDSAVRITHLPTGIVVSCQNERSQIQNKASAMAVLQSKL--LERRRQEERAVMDALK 307

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            T   WG Q+RSYVL PYQMVKDLRTN E  +PS V DG++DDF++A +  ++
Sbjct: 308 DTGNSWGNQMRSYVLHPYQMVKDLRTNFEVGNPSAVFDGEIDDFIEAGIRWRR 360


>gi|229821252|ref|YP_002882778.1| peptide chain release factor 2 [Beutenbergia cavernae DSM 12333]
 gi|259585260|sp|C5BYB6|RF2_BEUC1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|229567165|gb|ACQ81016.1| peptide chain release factor 2 [Beutenbergia cavernae DSM 12333]
          Length = 374

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 149/353 (42%), Positives = 219/353 (62%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R++ L+     P LW +   A+ +     H  + +  +  +
Sbjct: 12  LRGTLEQITAVTDPDALRARIAELSEAAAAPDLWDDPDAAQKVTSRLSHTQSELERLDTL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D   L++LA EEDD   L E    L +I+  +   +  +LL+GE DS +A + + 
Sbjct: 72  RSRIDDLETLVQLAAEEDDADTLAEAEAELTKIRTSMGELEVRTLLAGEYDSREAVVTIR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ D+A MLLRMY RWAE++ + T+ L+    EEAG+KSAT  +K P A+G L 
Sbjct: 132 SGAGGVDAADFAEMLLRMYLRWAERKGYPTQVLDTSYAEEAGLKSATFEVKVPYAFGTLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++ +  I+I E+D RID +R+SG GGQ 
Sbjct: 192 VEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDHIDIPETDIRIDVFRSSGPGGQS 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV  Q E+SQ +N+A A  +L+++L     ++           
Sbjct: 252 VNTTDSAVRITHLPTGIVVSMQNEKSQIQNRAAAMRVLQSRLLLAMQEEENAKKKELAGD 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +  WG Q+RSYVLQPYQMVKDLRT  E  +PS V DGD+DDF++A +  ++
Sbjct: 312 -VKASWGDQMRSYVLQPYQMVKDLRTEHEVGNPSAVFDGDIDDFIEAGIRWRR 363


>gi|229164123|ref|ZP_04292059.1| Peptide chain release factor 2 [Bacillus cereus R309803]
 gi|228619359|gb|EEK76249.1| Peptide chain release factor 2 [Bacillus cereus R309803]
          Length = 326

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 165/325 (50%), Positives = 215/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
                 W +   A++++ E   L   +   +++ +   +  I  EL  EE D  + +E  
Sbjct: 1   MMGAGFWDDQQGAQVVINEANALKEMVGKFRKLDETFENLEITHELLKEEYDEDLHEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR 
Sbjct: 61  AEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D +EIEI   D +IDTYRASGAGGQH+NTTDSAVRITH PT  VV CQ ERSQ
Sbjct: 181 EVVPEFNDEVEIEIRSEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+  A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DG++D F+ A L  +
Sbjct: 301 TEVGNVQAVMDGEIDPFIDAYLRSR 325


>gi|169335448|ref|ZP_02862641.1| hypothetical protein ANASTE_01862 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258186|gb|EDS72152.1| hypothetical protein ANASTE_01862 [Anaerofustis stercorihominis DSM
           17244]
          Length = 364

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 166/351 (47%), Positives = 232/351 (66%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + ++L+ + G  +  +    L    T   D   W    +A  +++E + L + I+    +
Sbjct: 14  IDKELSDIAGSINIKSLKDELVKKETLMNDESFWNENDKANKILKEVKSLKSQINSYSSL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + +  D  +L+E+  E+   +      + L  ++ E++    ++LLSGE DSN+A L +H
Sbjct: 74  EYKKDDISVLVEMLQEDFSQNEADSAMEELLELEKELKVFTIDTLLSGEYDSNNAILSIH 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA MLLRM+ R+AEKRKFK + LE   G+ AGIKS TLLI G NAYG+LK
Sbjct: 134 PGAGGTESQDWAEMLLRMFIRFAEKRKFKIKILEQLPGDIAGIKSVTLLISGDNAYGYLK 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE+GVHRLVRISP+DSNSRRHTSF+S+ V P + + I +EI+ SD +IDTYRA GAGGQH
Sbjct: 194 GEKGVHRLVRISPFDSNSRRHTSFASVDVEPEIKEDINLEINPSDLKIDTYRAGGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVRITH+PT +VV CQ ERSQ +NK  A  +L+ KLY++ +++ +E  +  +  
Sbjct: 254 VNKTDSAVRITHLPTKIVVSCQNERSQFQNKETAMKILKGKLYKILMEEHKEKIDEIKGD 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             +I WG QIRSYV  PY MVKD RT  E ++   V+DGD++ F+ A L +
Sbjct: 314 YGQIAWGNQIRSYVFHPYSMVKDHRTKTETSNVQSVMDGDINIFIDAFLKM 364


>gi|325849490|ref|ZP_08170771.1| peptide chain release factor 2 [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325480110|gb|EGC83185.1| peptide chain release factor 2 [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 369

 Score =  262 bits (670), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 160/354 (45%), Positives = 229/354 (64%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G   D DN    +  +  +T   + W +  +A+ +M +     +       
Sbjct: 13  ELDKNLKMIGAHLDPDNLFVEIKNIEKETLKENFWDDSQKAQEIMADLSDKKDDYKTFIN 72

Query: 62  IQDRLCDNLILLELALE-EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           +++ L D   L+++  E  ++   L +  ++L  +K E+   + ++ L GE D N+AY+ 
Sbjct: 73  LKEELKDQSDLIDIIEETNEELDSLVDVENSLNMLKKEISSFKIKTELDGEYDRNNAYMV 132

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +HAGAGG E+ DWA ML+RMYTR+ E+R FK +  ++++ E  GIKSAT+ IKG  AYG+
Sbjct: 133 IHAGAGGLEATDWAEMLMRMYTRFFERRNFKFDITDLNNEEAGGIKSATIHIKGSFAYGY 192

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LKGE+GVHRLVRISP+DS+ RRHTSF+SI ++P ++D + +EI   D RIDTYRASGAGG
Sbjct: 193 LKGERGVHRLVRISPFDSSKRRHTSFASIDIFPELNDDMSVEIDPKDLRIDTYRASGAGG 252

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVN TDSAVRITHIPTGV+   Q ERSQ +NK  A  +L AKL +++ ++  E     +
Sbjct: 253 QHVNKTDSAVRITHIPTGVIASSQAERSQTQNKETAMKLLLAKLTQIKEEEHREKIEDIQ 312

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + T+I WG QIRSYV  PY +VKD RTN E  +   V+DGD+D F+ A LA K
Sbjct: 313 GNYTQIAWGSQIRSYVFHPYTLVKDHRTNFEVGNVESVMDGDIDGFIDAYLANK 366


>gi|54026461|ref|YP_120703.1| peptide chain release factor 2 [Nocardia farcinica IFM 10152]
 gi|76363350|sp|Q5YR52|RF2_NOCFA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|54017969|dbj|BAD59339.1| putative peptide chain release factor 2 [Nocardia farcinica IFM
           10152]
          Length = 372

 Score =  262 bits (670), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 152/356 (42%), Positives = 220/356 (61%), Gaps = 4/356 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +   +R+  L  +  DP LW +   A+ +  E  H    +  +++
Sbjct: 11  ELDATLKTVESVLDIEELRRRIDELEHQAADPDLWNDQDHAQRVTSELSHAQGELRRVED 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAY 118
           ++ RL D  +L ELA  E+  +      +       +  +VE  +  +LLSGE D  +A 
Sbjct: 71  LRRRLEDLPVLYELAEGEEGEARTAALEEADAERAALHSDVEAMEVRTLLSGEYDKREAL 130

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ DWA ML+RMY RWA++  +  E  +    EEAGIKSAT  +K P AY
Sbjct: 131 VNIRSGAGGVDAADWAEMLMRMYIRWADRHGYPVEVYDTSYAEEAGIKSATFAVKTPYAY 190

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRLVRISP+D+  RR TSF+ + V PVV+ +  IE+ E++ R+D YR+SG 
Sbjct: 191 GTLSVEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIEVPETEIRVDVYRSSGP 250

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVRITHIPTG+VV CQ E+SQ +NK  A  +L+AKL E + Q+     + 
Sbjct: 251 GGQSVNTTDSAVRITHIPTGIVVTCQNEKSQLQNKISAMRVLQAKLLERKRQEERAEMDA 310

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            ++++    WG Q+RSYVL PYQMVKDLRTN E  +PS VL+GD+D F+++ +  +
Sbjct: 311 LKTNEG-ASWGNQMRSYVLHPYQMVKDLRTNYEVNNPSAVLNGDIDGFIESGIRWR 365


>gi|257457828|ref|ZP_05622987.1| peptide chain release factor 2 [Treponema vincentii ATCC 35580]
 gi|257444541|gb|EEV19625.1| peptide chain release factor 2 [Treponema vincentii ATCC 35580]
          Length = 363

 Score =  262 bits (670), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 164/351 (46%), Positives = 220/351 (62%), Gaps = 4/351 (1%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L   GG+FD +   +R++           W +  +A+ L+ E + L N I   + +   +
Sbjct: 2   LTKFGGVFDSEAVKKRIAEKEAVAGQEGFWNDPKKAEKLLTEIKKLKNRIEPWETLIADI 61

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL---SGEADSNDAYLEVHA 123
            D   L EL  E  D        +    +K   E  +  + L   S E D +DA+L VHA
Sbjct: 62  EDLQTLYELTQEAGDADNADSVQEIDMSLKELQERFEKLNTLALLSDEVDGSDAFLTVHA 121

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+ DWA ML RMY RWAE+R F  E L+  + +E G+KS TL I+G  AYG+LK 
Sbjct: 122 GAGGTEACDWAQMLTRMYLRWAERRGFSVETLDELEADE-GLKSITLQIRGDYAYGFLKA 180

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRL+RISP+D+N+RRHTSFSS++V+PV+DD+IE+ I   D R+DTYRA GAGGQHV
Sbjct: 181 ETGVHRLIRISPFDANARRHTSFSSVYVFPVLDDTIEVNIRPEDLRVDTYRAGGAGGQHV 240

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N TDSAVR+TH+PTG+VV CQ ERSQ  N+A A +ML+A+LYE    ++E+      + K
Sbjct: 241 NKTDSAVRLTHLPTGIVVACQNERSQISNRATAMSMLKARLYEYYRNEKEKENAKFAAEK 300

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             I WG QIRSY+ QPY MVKD RT  E  +   V+DGD+D F++  L  +
Sbjct: 301 KGISWGNQIRSYIFQPYTMVKDHRTKHETGNIQAVMDGDIDGFIEDFLKKQ 351


>gi|126735602|ref|ZP_01751347.1| peptide chain release factor 2 [Roseobacter sp. CCS2]
 gi|126714789|gb|EBA11655.1| peptide chain release factor 2 [Roseobacter sp. CCS2]
          Length = 374

 Score =  262 bits (670), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 194/352 (55%), Positives = 244/352 (69%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + + L  L    D + A  RL   N + EDP LW +   A+ LMRERQ L +A+     I
Sbjct: 12  IEKSLALLAQRMDRETAPHRLEEFNARVEDPTLWDDPEAAQKLMRERQLLVDAMGNYDSI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L DN+ L+EL   E+D  ++ E    L ++  +   K+ E+LL GEAD ND +LE++
Sbjct: 72  NQELSDNIELIELGEMEEDAEVVAEAEAALVKLADKAAKKELEALLDGEADGNDTFLEIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWANML RMY RWAEK+ +K E      G+EAGIKSA+  I G NAYGWLK
Sbjct: 132 AGAGGTESCDWANMLARMYVRWAEKKGYKVELQAEQSGDEAGIKSASYKISGHNAYGWLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ +D R+DTYR+SGAGGQH
Sbjct: 192 SESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPADIRLDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL KR  + N    +
Sbjct: 252 VNTTDSAVRITHHPTGIVVTSS-EKSQHQNRDIAIKALKSRLYQMELDKRSTLVNEAHEN 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             + GWG QIRSYVLQPYQMVKDLRTN E +    VLDGDLD  M ATLA+ 
Sbjct: 311 AGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGLMAATLAMD 362


>gi|108798578|ref|YP_638775.1| peptide chain release factor 2 [Mycobacterium sp. MCS]
 gi|119867678|ref|YP_937630.1| peptide chain release factor 2 [Mycobacterium sp. KMS]
 gi|123070429|sp|Q1BBL5|RF2_MYCSS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|166225110|sp|A1UDD2|RF2_MYCSK RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|108768997|gb|ABG07719.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp.
           MCS]
 gi|119693767|gb|ABL90840.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp.
           KMS]
          Length = 371

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 159/357 (44%), Positives = 226/357 (63%), Gaps = 8/357 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+  L  +  + D D    R+  L  +  DP+LW +   A+ +  E  H  N +  ++E+
Sbjct: 12  LAATLTTVERVLDVDGLRDRIQKLEQEASDPNLWDDQSRAQKVTSELSHAQNELRRVEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQ---ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + R+ D  +L E+A EE+         E    L ++++++E  +  +LLSGE D  +A +
Sbjct: 72  RQRVEDLPVLYEMAAEEEGQDAENAGAEADAELAKLRVDIEAMEVRTLLSGEYDEREAVV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+  +  E  +    EEAGIKSAT  +  P AYG
Sbjct: 132 TIRSGAGGVDAADWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I++ E+D R+D YR+SG G
Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDVPETDLRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL     +K++E     
Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKLLA---RKKQEERAEL 308

Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           ++ K + G  WG Q+RSYVL PYQMVKDLRT  E  +PS VLDGD+D F++A +  +
Sbjct: 309 DALKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPSAVLDGDIDGFLEAGIRWR 365


>gi|282865194|ref|ZP_06274247.1| peptide chain release factor 2 [Streptomyces sp. ACTE]
 gi|282560117|gb|EFB65666.1| peptide chain release factor 2 [Streptomyces sp. ACTE]
          Length = 368

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 155/353 (43%), Positives = 215/353 (60%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +     HL   +   + +
Sbjct: 13  LSSTMGSIEAVLDLDALRADIAALEEQAAAPSLWDDPEAAQKITSRLSHLQAEVRKTEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA +E D   L E    L  ++  ++  +  +LLSGE D+ +A + + 
Sbjct: 73  RGRIDDLGVLFELAEDEGDADALAEAEAELVSVRKALDEMEVRTLLSGEYDAREAVVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFTVQVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   N  +  
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMNALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEFEIGNPEAVFNGEIDGFIEAGIRWRK 364


>gi|182419781|ref|ZP_02951021.1| peptide chain release factor 2 [Clostridium butyricum 5521]
 gi|237666525|ref|ZP_04526510.1| peptide chain release factor 2 [Clostridium butyricum E4 str. BoNT
           E BL5262]
 gi|182376329|gb|EDT73911.1| peptide chain release factor 2 [Clostridium butyricum 5521]
 gi|237657724|gb|EEP55279.1| peptide chain release factor 2 [Clostridium butyricum E4 str. BoNT
           E BL5262]
          Length = 347

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 147/341 (43%), Positives = 212/341 (62%), Gaps = 1/341 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
            FD     + L  L  K ++P  W +  +A+ + ++ + + + I    +++ +L D  +L
Sbjct: 6   HFDRAGLEKELHELECKMQEPGFWDDSKKAEEVTKKSKLIKDKIENYDKLKSQLDDIDVL 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            ++  E+D  S  +             E    + LLSGE D N+A + +H G GGT++ D
Sbjct: 66  KDIMEEDDIESANEIIQTIKSIEHEI-EDYNMKILLSGEYDKNNAIVTLHVGVGGTDAND 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           W  MLLRMYTRW E + +  E +++  G+EAGIKS TL + G   YG+LK E+G+HRLVR
Sbjct: 125 WTEMLLRMYTRWCENKGYSVETIDLIAGDEAGIKSVTLKVTGEYVYGYLKAEKGIHRLVR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISPY++N +R TSF+S+ V P +    +I I   D ++DTYR+SG+GGQH+N TDSAVRI
Sbjct: 185 ISPYNANGKRQTSFASMEVLPELTKEQDITIRPDDLKVDTYRSSGSGGQHINKTDSAVRI 244

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           THIPTG+VVQCQ ERSQ  N+  A  ML++KL EL+ +  +E          ++GWG QI
Sbjct: 245 THIPTGIVVQCQNERSQFSNRETAMEMLKSKLVELKERAHKEKIEDLTGELKDMGWGSQI 304

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           RSYV  PY MVKD RTN+E ++ + V+DGD+D F+ A L  
Sbjct: 305 RSYVFHPYSMVKDHRTNVETSNVNGVMDGDIDLFINAFLKQ 345


>gi|118473158|ref|YP_886446.1| peptide chain release factor 2 [Mycobacterium smegmatis str. MC2
           155]
 gi|166225108|sp|A0QU58|RF2_MYCS2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|118174445|gb|ABK75341.1| peptide chain release factor 2 [Mycobacterium smegmatis str. MC2
           155]
          Length = 368

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 162/354 (45%), Positives = 221/354 (62%), Gaps = 5/354 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R+  L     DP+LW +   A+ +  +  H  N +  ++ +
Sbjct: 12  LDTTLTTVERVLDVDGLRNRIEQLEKDASDPNLWDDQTRAQKVTSDLSHAQNELRRVEGL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L ELA E      + E    L +++ ++E  +  +LLSGE D  +A + + 
Sbjct: 72  RQRLDDLPVLYELAAEAGGPDEVAEADAELAKLREDIEAMEVRTLLSGEYDEREAVVTIR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ DWA ML+RMY RWAEK  +  E  +    EEAGIKSAT  +  P AYG L 
Sbjct: 132 SGAGGVDAADWAEMLMRMYIRWAEKHDYPVEIFDTSYAEEAGIKSATFAVHAPFAYGTLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  IEI E+D R+D YR+SG GGQ 
Sbjct: 192 VEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIEIPENDIRVDVYRSSGPGGQS 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL E   +KR E     ++ 
Sbjct: 252 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLE---RKRLEERAELDAL 308

Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K + G  WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +  +
Sbjct: 309 KGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPASVLDGDIDGFLEAGIRWR 362


>gi|256820726|ref|YP_003142005.1| peptide chain release factor 2 [Capnocytophaga ochracea DSM 7271]
 gi|256582309|gb|ACU93444.1| bacterial peptide chain release factor 2 (bRF- 2) [Capnocytophaga
           ochracea DSM 7271]
          Length = 367

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 154/351 (43%), Positives = 231/351 (65%), Gaps = 2/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L  L   FD D     +S    KT  P  W N  EA+ +MRE +     +   +E 
Sbjct: 10  LVNRLGALRRYFDVDAKRIEISNEEEKTFAPDFWDNAKEAEKVMRELRTKKKWVEDYEEA 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++   D  +LL+   E +  +   +         +E    +F ++LS E D+  A L++ 
Sbjct: 70  ENLTSDIEVLLDFFKEGEATAEDVDHQYTQALHAIEAL--EFRNMLSDEGDTMSAVLQIT 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+MLLRMYT W   +K+K + L   +G+ AG+K+ T+ I+G  A+G+LK
Sbjct: 128 AGAGGTESCDWASMLLRMYTMWCNNQKYKVKTLNFQEGDVAGVKTVTIEIEGEYAFGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+DSN++RHTSF+S++VYP+VDD+IEI+I+ +D   +T R+SGAGGQ+
Sbjct: 188 GENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIDINPADITFETMRSSGAGGQN 247

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++AVR+ H PTG++++  + RSQ  NK +A  +L+++LYE+EL+KR+   +  E+ 
Sbjct: 248 VNKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQLLKSQLYEIELKKRQAKRDEIEAG 307

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K +I WG QIR+YV+ PY++VKD+RTN E T    V++G+LD+F+KA L +
Sbjct: 308 KMKIEWGSQIRNYVMHPYKLVKDVRTNYESTDVDSVMNGELDEFLKAYLML 358


>gi|313679114|ref|YP_004056853.1| bacterial peptide chain release factor 2 (brf-2) [Oceanithermus
           profundus DSM 14977]
 gi|313151829|gb|ADR35680.1| bacterial peptide chain release factor 2 (bRF-2) [Oceanithermus
           profundus DSM 14977]
          Length = 370

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 161/353 (45%), Positives = 213/353 (60%), Gaps = 5/353 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L ++L+ LGG+FD      RL  L  +     LW +   A+ L +E   L   +   ++
Sbjct: 5   ELKQKLDALGGIFDIAGKKARLEELEKELGQEGLWDDPAAAQKLTQEAARLKKVVEEYEQ 64

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L   + L + A  E+  S        L+    ++E    ++LL  E    +A L +
Sbjct: 65  LSGDLESLIELWDEASPEERES----LEPELEEAAKKLEDLYHQTLLGFEHAEKNAILTI 120

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
             GAGGTE+ DWA MLLRMYTRWAE+  FK E +++  G EAGI SA L+++G NAYG L
Sbjct: 121 KPGAGGTEAMDWAEMLLRMYTRWAERHGFKVELVDVTPGPEAGIDSAELIVRGENAYGLL 180

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E+GVHRLVR SP+DS  RRHTSF+S+ V P VDD++EIEI   D RID +RA G GGQ
Sbjct: 181 SAERGVHRLVRPSPFDSTGRRHTSFASVEVSPEVDDTVEIEIKPEDLRIDVFRAQGHGGQ 240

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRI H+PTG++V  Q  RSQHKNK  A  +L+++L+E E QKR+E       
Sbjct: 241 GVNTTDSAVRIVHLPTGIIVTSQATRSQHKNKELAMKVLKSRLFEREWQKRQEEMAKLRG 300

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +  I WG QIRSYVL     VKD RT + +  P  VLDGDLDD + A L  +
Sbjct: 301 EQKAIEWGSQIRSYVLDKQ-YVKDHRTGLMRHDPDKVLDGDLDDLIWAGLEWR 352


>gi|227514375|ref|ZP_03944424.1| peptide chain release factor RF2 [Lactobacillus fermentum ATCC
           14931]
 gi|227087241|gb|EEI22553.1| peptide chain release factor RF2 [Lactobacillus fermentum ATCC
           14931]
          Length = 355

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 168/347 (48%), Positives = 219/347 (63%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           ++  GGLFD D   + ++    +   P  W +   A+  +     L         +QD++
Sbjct: 1   MHASGGLFDLDALNESIAQGENEMTAPDFWDDNQRAQEKVAALNELKKRRDNFLTLQDQV 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            +  +  E+   E D  +  E  DN   ++  +   + E LL G  D +DA LE+H GAG
Sbjct: 61  EELALTAEMLQAEPDPELKAELDDNFPGVQEHLRAYRLEQLLDGPYDQSDAILEIHPGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDW  MLLRMY RWA +  F  E      GEEAGIKS TLLIKG NAYG+L  E+G
Sbjct: 121 GTEAQDWGEMLLRMYMRWANQHGFAVETANYEAGEEAGIKSVTLLIKGHNAYGYLHPEKG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+DS +RRHTSF+S+ V P++D+SIE+EI  SD R+DT+RASGAGGQH+N T
Sbjct: 181 VHRLVRISPFDSAARRHTSFASVDVMPILDESIEVEIDPSDLRVDTFRASGAGGQHINKT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITH+PTG+V   Q ERSQ +N+  A NML++KLYELE +K+ +     E  + EI
Sbjct: 241 ESAVRITHLPTGIVTSSQAERSQLQNRITAMNMLKSKLYELEEEKKAKERAQIEGEQREI 300

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           GWG QIRSYV  PY +VKD RT  E      V+DGDLD F+ A L  
Sbjct: 301 GWGSQIRSYVFHPYTLVKDARTGYETHDVIGVMDGDLDPFINAYLQW 347


>gi|160931692|ref|ZP_02079086.1| hypothetical protein CLOLEP_00523 [Clostridium leptum DSM 753]
 gi|156869337|gb|EDO62709.1| hypothetical protein CLOLEP_00523 [Clostridium leptum DSM 753]
          Length = 374

 Score =  262 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 158/348 (45%), Positives = 231/348 (66%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  L      +   + +  L      P  W ++ +++ +++    L N +S  + +    
Sbjct: 18  IKDLKEALGLEAMKKEIGELEEAQTSPDFWDDMEKSQKIIQRTSMLKNKVSAYETLVSGY 77

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D L L+E+  EE+D SIL +    +++++ E+E ++  +LL+GE D+N+A L  HAGAG
Sbjct: 78  EDALTLIEMGDEEEDLSILPDAQQEVEKVRKELEEQRLATLLTGEYDANNAILTFHAGAG 137

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWA ML RMY RW E+  FK + L+  DGEEAG+KSA +LI+G NAYG+LK E G
Sbjct: 138 GTEAQDWAEMLYRMYCRWGERHNFKVKTLDYLDGEEAGLKSAVVLIEGLNAYGYLKSEAG 197

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR+SP+D++ RRHTSF+S+ V P +++ +E+EI+  D ++D YRASGAGGQ VN T
Sbjct: 198 VHRLVRVSPFDASGRRHTSFASLEVMPEINEDVEVEIAPEDIKMDVYRASGAGGQKVNKT 257

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+THIPTG+VV CQ ERSQH+N+  A  ML +KL E++ ++  +  +  +  + EI
Sbjct: 258 SSAVRLTHIPTGIVVSCQVERSQHQNREVAMKMLASKLMEIKEREHLDKISDIKGVQKEI 317

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           GWG QIRSYV  PY + KD RTN E  + + V+DGD+D F+ A L  +
Sbjct: 318 GWGSQIRSYVFMPYTLAKDHRTNYEMGNINAVMDGDIDGFINAYLKQE 365


>gi|256750898|ref|ZP_05491782.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|256750233|gb|EEU63253.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus
           CCSD1]
          Length = 330

 Score =  262 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 162/325 (49%), Positives = 220/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP+ W ++ +++ L + ++ L   +     +  +  D   L+EL LEE D SI  E  
Sbjct: 1   MADPNFWNDIKKSQELAKRQKELKELLEEYNSLVTKWEDLSTLIELGLEEGDESITDEVD 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + +K ++E  + ++LL+G  D N+A L +HAG+GGTE+QDWA MLLRMYTRWA  + 
Sbjct: 61  KEYKELKKKLEDLKIKTLLNGLYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+ E L+   GEEAGIKS TL+IKGP AYG+LK E GVHRLVRISP+D+  RRHTSF+ +
Sbjct: 121 FEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + + IE+EI   D +IDTYRASGAGGQ+VN T+SAVRITH+PTG+VV CQ ERSQ
Sbjct: 181 EVLPELKNDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A  ML+AKL +L +++++E     +    E  WG QIRSYV QPY +VKD RTN
Sbjct: 241 IQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DG++D F+ A L  K
Sbjct: 301 YEVGNVQAVMDGEIDGFINAYLKQK 325


>gi|212710038|ref|ZP_03318166.1| hypothetical protein PROVALCAL_01091 [Providencia alcalifaciens DSM
           30120]
 gi|212687245|gb|EEB46773.1| hypothetical protein PROVALCAL_01091 [Providencia alcalifaciens DSM
           30120]
          Length = 329

 Score =  262 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 177/327 (54%), Positives = 227/327 (69%), Gaps = 1/327 (0%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
           N + E P +W     A+ L +ER  L+  +  I ++   + D   LLELA+E DD     
Sbjct: 2   NAELEQPDVWNEPERAQALGKERSSLEAIVETIDQLTQGIEDVEGLLELAVEADDEETFN 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E    L  ++ ++E  +F  + SGE DS D Y+++ AG+GGTE+QDWA+ML+RMY RWAE
Sbjct: 62  EAGAELDALQGKLEQLEFRRMFSGEYDSADCYIDLQAGSGGTEAQDWASMLMRMYLRWAE 121

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            + FKTE +E  DG+ AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF
Sbjct: 122 SKGFKTEIIEESDGDVAGLKSATIKIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSF 181

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           SS ++YP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +
Sbjct: 182 SSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQND 241

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQHKNK QA   L+AKLYELE+QK+       E +K++IGWG QIRSYVL     +KDL
Sbjct: 242 RSQHKNKDQAMRQLKAKLYELEMQKKNADKQAMEENKSDIGWGSQIRSYVLDD-ARIKDL 300

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAI 353
           RT +E  +   VLDGDLD F++A+L  
Sbjct: 301 RTGVETRNTQAVLDGDLDKFIEASLKA 327


>gi|78485070|ref|YP_390995.1| peptide chain release factor 2 [Thiomicrospira crunogena XCL-2]
 gi|78363356|gb|ABB41321.1| bacterial peptide chain release factor 2 (bRF-2) [Thiomicrospira
           crunogena XCL-2]
          Length = 332

 Score =  262 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 170/329 (51%), Positives = 231/329 (70%), Gaps = 1/329 (0%)

Query: 25  FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84
            +  + EDP +W +   A+ L +E+  LDN ++ I++++  L     +LE+A  + D  +
Sbjct: 3   EVERELEDPTVWNDPERAQALGKEKSQLDNVVTTIQDLESSLESAHEILEMAEMDADQEM 62

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           + E    L R++ ++E  +F+ + SGE D+N+ YLE+ AG+GGTE+QDWANM+LRMY RW
Sbjct: 63  VDEVVSELARLEEKLEQLEFQRMFSGELDANNCYLEIQAGSGGTEAQDWANMILRMYLRW 122

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           AE   FK E LEI  G+ AGIK AT+ ++G  A+GWL+ E GVHRLVR SP+DS +RRHT
Sbjct: 123 AESHGFKAEILEISAGDVAGIKGATVHVQGDYAFGWLRTETGVHRLVRKSPFDSGNRRHT 182

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           SF+S+++ P +DDS E+EI+ +D RID YRASGAGGQHVN T+SAVRITH+PT  V QCQ
Sbjct: 183 SFASVFISPEIDDSFEVEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTNTVTQCQ 242

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
             RSQH+NKA+A   LRAKLYELE+  R       E +K++IGWG QIRSYVL     +K
Sbjct: 243 NGRSQHQNKAEAMKQLRAKLYELEMLSRNAEKQEMEENKSDIGWGSQIRSYVLD-SGRIK 301

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           DLRTN+E  + + VLDGDLD F+  +L  
Sbjct: 302 DLRTNVETGNTNGVLDGDLDQFIIPSLKA 330


>gi|302325967|gb|ADL25168.1| peptide chain release factor 2 [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 389

 Score =  262 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 144/341 (42%), Positives = 220/341 (64%), Gaps = 1/341 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD +   + L  L   + DP+LW +  +A+ +M++  +L   I   KE+     D  
Sbjct: 42  GGIFDLEAKTEELYVLEKDSGDPNLWNDQEKAQSMMKKIGNLKGLIDSWKEVSQTCDDLA 101

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L E++ +E+   +      ++  +K  VE  +F+ +L+G  D+    + +H GAGGTES
Sbjct: 102 ELYEMSKDEESADLTATLESDIADLKSRVEAMEFKKMLNGPDDACACLMSIHPGAGGTES 161

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA ML RMYT + E+ K   + ++  + E+AG+KSAT+ +   NAYG L+ E GVHRL
Sbjct: 162 QDWALMLFRMYTHFFEREKMDFKVVDFQEAEDAGLKSATIEVSCENAYGLLRSEIGVHRL 221

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+D+N+RRHTSF+++++YP   + +E ++  S+ R+DTYR+SGAGGQ++N TDSAV
Sbjct: 222 VRISPFDANARRHTSFTAVYLYP-EHEDVEFDLDMSEVRVDTYRSSGAGGQYINKTDSAV 280

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+TH+PTG++  CQ ERSQ +N+   + ML+  + E    + E   +   + K ++ WG 
Sbjct: 281 RMTHLPTGIMASCQTERSQIQNRETCYKMLKTMVAEHYRLEEEAKRDARMAEKKKVEWGS 340

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIRSYVLQPYQ+VKDLRT +E +  + VLDG +  F+ A L
Sbjct: 341 QIRSYVLQPYQLVKDLRTGVETSDTAGVLDGKIKPFIDAYL 381


>gi|239623407|ref|ZP_04666438.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239522373|gb|EEQ62239.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 338

 Score =  262 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 157/324 (48%), Positives = 218/324 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E+P  W N  ++  ++RE ++L + +   +E++    D  +++++  EE+D S++ E  
Sbjct: 1   MEEPGFWDNPEKSTRMVREAKNLKDEVETFRELEQEYEDIQVMIQMGYEENDASLIPEIE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L      +E  + + LLSGE DSN+A L ++AGAGGTES DW +ML RMY RWAEK+ 
Sbjct: 61  EMLGHFSDTLEKMRMKLLLSGEYDSNNAILRLNAGAGGTESCDWCSMLYRMYCRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FKTE L+  DG+EAGIKS T+ I G NAYG+L+ E GVHRLVRISP+++  +R TSF S 
Sbjct: 121 FKTEVLDFLDGDEAGIKSVTVQINGENAYGYLRSEHGVHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + P + + I+IEI+  D RIDTYR+SGAGGQH+N T SA+RITH P+G VV CQ ERSQ
Sbjct: 181 DIMPDIQEDIDIEINPDDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGTVVTCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK +A  ML++KL+ L+ +++   A        + GWG QIRSYVLQPY MVKD RT 
Sbjct: 241 FQNKDKAMQMLKSKLFLLKQEEQAAKAAGIRGDVKDNGWGSQIRSYVLQPYTMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  +   VLDG++D F+ A L  
Sbjct: 301 EESGNVDAVLDGNIDSFISAYLRW 324


>gi|326389631|ref|ZP_08211197.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus JW
           200]
 gi|325994346|gb|EGD52772.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus JW
           200]
          Length = 330

 Score =  262 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 161/325 (49%), Positives = 221/325 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W ++ +++ L ++++ L   +     +  +  D   L+EL L+E D SI  E  
Sbjct: 1   MSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLNTLIELGLDEGDESITDEVD 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + +K ++E  + ++LL+G  D N+A L +HAG+GGTE+QDWA MLLRMYTRWA  + 
Sbjct: 61  KEYKELKKKLEDLKIKTLLNGPYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+ E L+   GEEAGIKS TL+IKGP AYG+LK E GVHRLVRISP+D+  RRHTSF+ +
Sbjct: 121 FEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ IE+EI   D +IDTYRASGAGGQ+VN T+SAVRITH+PTG+VV CQ ERSQ
Sbjct: 181 EVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A  ML+AKL +L +++++E     +    E  WG QIRSYV QPY +VKD RTN
Sbjct: 241 IQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DG++D F+ A L  K
Sbjct: 301 YEVGNVQAVMDGEIDGFINAYLKQK 325


>gi|313888002|ref|ZP_07821680.1| peptide chain release factor 2 [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845957|gb|EFR33340.1| peptide chain release factor 2 [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 371

 Score =  262 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 176/344 (51%), Positives = 236/344 (68%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
             LG   + D+  +++  LN K  +P  W +   A+ ++RE       I    ++ D + 
Sbjct: 20  KSLGESLEIDSLKEKVVELNKKQMEPGFWDDNESAQKVIRETNSYQRKIDQYDKLIDLIT 79

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   L+ L   E+D S   +  + +  I+ +    +  +LL+GE DS+DA L +HAGAGG
Sbjct: 80  DAEDLIALMEIEEDYSSYSDFQELVDEIEKDTAEFKLNTLLNGEYDSHDAILSIHAGAGG 139

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDWA+MLLRMYTR+AE + FK E L++   +EAGIKS TL I G NAYG+LKGE+GV
Sbjct: 140 TEAQDWASMLLRMYTRYAENKGFKVETLDLLKEDEAGIKSVTLKISGDNAYGYLKGEKGV 199

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVRISP+DSN RRHTSFSS+ V+P +DD  E+EI + + +IDTYR+SGAGGQHVNTTD
Sbjct: 200 HRLVRISPFDSNKRRHTSFSSVDVFPEIDDDTEVEIKDEELKIDTYRSSGAGGQHVNTTD 259

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG+VVQCQ ERSQ +N+ +A NML+AKL  L  ++++E     + + ++I 
Sbjct: 260 SAVRITHIPTGIVVQCQNERSQIQNREKAMNMLKAKLVALAEEEKKEKIEDLQGNYSQIA 319

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           WG QIRSYV QPY MVKD RTN++      V+DGDLD F+ A L
Sbjct: 320 WGSQIRSYVFQPYTMVKDHRTNVDVGDVEKVMDGDLDIFINAYL 363


>gi|288905693|ref|YP_003430915.1| peptide chain release factor 2 [Streptococcus gallolyticus UCN34]
 gi|306831789|ref|ZP_07464945.1| peptide chain release factor RF2 [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325978722|ref|YP_004288438.1| peptide chain release factor 1 [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288732419|emb|CBI13991.1| peptide chain release factor 2 [Streptococcus gallolyticus UCN34]
 gi|304425987|gb|EFM29103.1| peptide chain release factor RF2 [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325178650|emb|CBZ48694.1| Peptide chain release factor 1 [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 336

 Score =  262 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 152/336 (45%), Positives = 208/336 (61%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L  K  +P  W + I A+   +E   L        E+Q+   +  + LE+  E
Sbjct: 1   MEEDIALLENKMTEPDFWNDNIAAQKTSQELNGLKQTYETFNEMQELSDETELYLEMLDE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +D      E S         +   +   LLS   D N+A LE+H G+GGTE+QDWA+ML 
Sbjct: 61  DDSVQAELEESLEKLD--KIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADMLF 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTR+   + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS
Sbjct: 119 RMYTRYGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSFSS+ V P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIPTG
Sbjct: 179 AKRRHTSFSSVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  
Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RT  E      V+DGD+D F+ A L  +
Sbjct: 299 PYTMVKDHRTGYEVAQVDKVMDGDIDGFIDAYLKWR 334


>gi|77918851|ref|YP_356666.1| peptide chain release factor 2 [Pelobacter carbinolicus DSM 2380]
 gi|77544934|gb|ABA88496.1| bacterial peptide chain release factor 2 (bRF-2) [Pelobacter
           carbinolicus DSM 2380]
          Length = 326

 Score =  262 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 174/322 (54%), Positives = 232/322 (72%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W++  +A+ +++ER  L+  ++  +E Q  L D  +L +L  E  D + L+E S
Sbjct: 1   MSRPGFWESGDQAQDILKERTGLEKLVTSFRESQQELEDLQLLADLGAESGDEATLEEIS 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L  ++  V+  +F  +LSGE DS DA   ++AGAGGTE+QDWA+MLLRMY R+ EK+ 
Sbjct: 61  ALLPDLQRRVDKMEFARMLSGEHDSCDAIFSINAGAGGTEAQDWADMLLRMYMRYFEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E  +   G+EAGIK ATL + G  AYGWL+ E G+HRLVRISP+DSN+RRHTSF S+
Sbjct: 121 FKAELTDHQPGDEAGIKGATLTVSGDYAYGWLRAEIGIHRLVRISPFDSNARRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           +V+P + D +E++I+E D ++DTYR+SGAGGQHVN TDSA+RITH+P+G+VV CQ ERSQ
Sbjct: 181 FVFPELPDDVEVDINEKDLKVDTYRSSGAGGQHVNKTDSAIRITHVPSGIVVACQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           HKN+A A   L+A+LYELEL+K+EE A+     K EIGWG QIRSYVL PY+MVKD RTN
Sbjct: 241 HKNRATAMKQLKARLYELELRKKEEEASAIAGEKMEIGWGSQIRSYVLHPYRMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E  +   VLDGDLD F++A L
Sbjct: 301 FESGNADAVLDGDLDGFIEAYL 322


>gi|27262208|gb|AAN87385.1| bacterial peptide chain release factor 2 [Heliobacillus mobilis]
 gi|111074980|gb|ABH04839.1| bacterial peptide chain release factor 2 [Heliobacillus mobilis]
          Length = 341

 Score =  262 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 162/335 (48%), Positives = 229/335 (68%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             +R++ L     DP  W++  +A+  M+E   L + +    ++  +  D  +L EL  E
Sbjct: 4   KEERIAELELMITDPTFWEDQEQAQKTMQELTGLKDKVKSFFDLYQKWEDLGVLRELGAE 63

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E+D  ILQE  + +Q I+ E++    + LL+G  D N+A + +HAGAGGTE+ DW  ML+
Sbjct: 64  EEDPDILQEIEEGIQTIQSELDRWHLQLLLNGPYDRNNALVTLHAGAGGTEAMDWNEMLM 123

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RW EK+ +K + L+   G+EAG+KSATL   G NAYG+LKGE GVHRLVRISP+D+
Sbjct: 124 RMYIRWGEKKGYKVDILDSLAGDEAGMKSATLSFSGENAYGYLKGEMGVHRLVRISPFDA 183

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           + RRHTSF+S+ V P V D I+I+I+  D ++DT+RASGAGGQHVN T+SAVRITHIPTG
Sbjct: 184 SGRRHTSFASVEVLPEVSDDIDIQINSEDLKVDTFRASGAGGQHVNKTESAVRITHIPTG 243

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV CQ ERSQ +N+A A  ML+AKL+E + Q++ +  N  +  + +I +G QIRSYV  
Sbjct: 244 IVVACQSERSQIQNRATAMRMLQAKLFERQRQEQADEVNRLKGDQQDIAFGSQIRSYVFH 303

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           PY +VKD RTN E  +  +V+DG++DDF+ A +  
Sbjct: 304 PYNLVKDHRTNCEVGAVYNVMDGEIDDFVSAYMIW 338


>gi|257893004|ref|ZP_05672657.1| peptide chain release factor 2 [Enterococcus faecium 1,231,408]
 gi|257829383|gb|EEV55990.1| peptide chain release factor 2 [Enterococcus faecium 1,231,408]
          Length = 338

 Score =  262 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 163/335 (48%), Positives = 224/335 (66%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++    K  +P  W +   A+ ++ E             + + L +  +++E+  E
Sbjct: 1   MEEDIAEAEAKMAEPGFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVEMLQE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D ++ +E    +  +  +++  +   LL G  D N+A +E+H GAGGTESQDW +MLL
Sbjct: 61  EPDAAMQEEAETRINALDEKMKTYELSMLLDGPYDRNNAIVELHPGAGGTESQDWGSMLL 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTRWAE+  ++ E L+   G+EAGIKS TLLIKG NA+G+LK E+GVHRLVRISP+DS
Sbjct: 121 RMYTRWAEQHGYQVETLDYQAGDEAGIKSVTLLIKGHNAFGYLKSEKGVHRLVRISPFDS 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSF S+ V P +D++I+IEI+  D +IDTYRASGAGGQH+N T+SAVRITH+PTG
Sbjct: 181 AKRRHTSFCSVDVMPELDETIDIEINPDDLKIDTYRASGAGGQHINKTESAVRITHLPTG 240

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
            VV  Q +RSQ KN+ QA  ML+AKLY+LE++K+E+ A      + EIGWG QIRSYV  
Sbjct: 241 TVVASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQIRSYVFH 300

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           PY MVKD RTN+E  +   V+DGDLD F+   L +
Sbjct: 301 PYSMVKDHRTNVETGNVQAVMDGDLDLFIDGYLKM 335


>gi|227821685|ref|YP_002825655.1| peptide chain release factor 2 [Sinorhizobium fredii NGR234]
 gi|227340684|gb|ACP24902.1| peptide chain release factor 2 protein [Sinorhizobium fredii
           NGR234]
          Length = 342

 Score =  262 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 230/328 (70%), Positives = 280/328 (85%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
           N K EDP LW +  EA+ LMRERQ LD++I+ ++  + +L DN+ L+EL  EE D +I+ 
Sbjct: 2   NNKAEDPTLWNDAGEAQKLMRERQQLDDSITGLRRFEQQLSDNIELIELGEEEGDSAIVT 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E  + L++++ E   KQ E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMY+RWAE
Sbjct: 62  EAEEALRQLRNEASKKQVEAMLSGEADQNDTYLEVHSGAGGTESQDWANMLLRMYSRWAE 121

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           ++ +K E +EI DGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSF
Sbjct: 122 RQGYKVELMEIQDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSF 181

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           SSIWVYPVVDDSI+I+I+E DCRIDTYR+SGAGGQHVNTTDSAVRITH+P+G+VVQCQQE
Sbjct: 182 SSIWVYPVVDDSIQIDINEGDCRIDTYRSSGAGGQHVNTTDSAVRITHMPSGIVVQCQQE 241

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQHKN+A+AW+MLRA+LYE EL+KRE+ AN   +SKT+IGWG QIRSYVLQPYQ+VKDL
Sbjct: 242 RSQHKNRAKAWDMLRARLYEAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKDL 301

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           RT +E TSP DVLDG+L++FM+A LA +
Sbjct: 302 RTGVESTSPGDVLDGELNEFMEAALAHR 329


>gi|254445589|ref|ZP_05059065.1| peptide chain release factor 2 [Verrucomicrobiae bacterium DG1235]
 gi|198259897|gb|EDY84205.1| peptide chain release factor 2 [Verrucomicrobiae bacterium DG1235]
          Length = 368

 Score =  262 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 154/354 (43%), Positives = 210/354 (59%), Gaps = 3/354 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  + +  GG+FD D     +  L  +      W +   A+ ++ +       ++ +   
Sbjct: 1   MKSEPDTYGGIFDVDKKKTEIGELEAQMSAEGFWNDQKAAQAVIAQANLAKGVVNGMTAF 60

Query: 63  QDRLCD---NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
             +L D      LL     ++     +E       +K E++  + +  L+   D  +A L
Sbjct: 61  MAKLDDARAMEELLNEEGVDELSDEAEELQAAAVALKEELDELEIQCYLNKPHDRCNALL 120

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            V+AGAGGTES DWA +L RMY+RWAE+R FK E +++  GEEAG+   TL I G NA+G
Sbjct: 121 SVNAGAGGTESCDWAELLYRMYSRWAERRGFKVEVVDMLPGEEAGLDKVTLRIVGENAFG 180

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           +   E+GVHRLVRISP+DS  RRHTSF ++ V   ++D IEIEI   D R DTYR+SG G
Sbjct: 181 YANAERGVHRLVRISPFDSQKRRHTSFCAVDVVAEIEDDIEIEIEAKDLREDTYRSSGKG 240

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQHVN TDSAVR+THIPTG+V  CQ +RSQHKN++ A  ML+A+LYE    ++       
Sbjct: 241 GQHVNKTDSAVRLTHIPTGIVAACQSDRSQHKNRSAAMKMLKARLYERMEDEKRSAMEKM 300

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
              K EIGWG QIRSYV QPYQMVKDLRT +E  +   V+DGD+D F+   L  
Sbjct: 301 YGEKGEIGWGNQIRSYVFQPYQMVKDLRTGVETGNIQAVMDGDIDRFVSGWLRA 354


>gi|312140591|ref|YP_004007927.1| peptide chain release factor prfb [Rhodococcus equi 103S]
 gi|325675787|ref|ZP_08155471.1| peptide chain release factor RF2 [Rhodococcus equi ATCC 33707]
 gi|311889930|emb|CBH49247.1| peptide chain release factor PrfB [Rhodococcus equi 103S]
 gi|325553758|gb|EGD23436.1| peptide chain release factor RF2 [Rhodococcus equi ATCC 33707]
          Length = 367

 Score =  262 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 157/355 (44%), Positives = 226/355 (63%), Gaps = 6/355 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +   +R+  L  +  DP LW +   A+ +  +  H  + +  ++E
Sbjct: 11  ELDTTLTTVEKVLDVEELRRRIDELEHQASDPELWNDQEHAQQVTSQLSHAQSELRRVEE 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  +L ELA E +    + +      +++ ++E  + +++LSGE D  DA + +
Sbjct: 71  LRSRLDDMAVLYELAEE-EGPEAVADAHAERAQLRTDIEAMEVKTMLSGEYDQRDALVNI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG ++ DWA ML+RMY RWAEKR +  E  +    EEAGIKSAT  +K P +YG L
Sbjct: 130 RAGAGGVDAADWAEMLMRMYIRWAEKRGYGVEVYDTSYAEEAGIKSATFAVKAPYSYGTL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I E+D R+D YR+SG GGQ
Sbjct: 190 SIEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIDIDENDVRVDVYRSSGPGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+TH+PTG+VV CQ E+SQ +NK  A  +L+AKL E   +KR+E     ++
Sbjct: 250 SVNTTDSAVRLTHVPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLE---RKRQEERAEMDA 306

Query: 302 SKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K + G  WG Q+RSYVL PYQMVKDLRT  E  +PS VLDG++D F++A +  +
Sbjct: 307 LKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVNNPSAVLDGEIDGFIEAGIRWR 361


>gi|282848898|ref|ZP_06258288.1| peptide chain release factor 2 [Veillonella parvula ATCC 17745]
 gi|282581403|gb|EFB86796.1| peptide chain release factor 2 [Veillonella parvula ATCC 17745]
          Length = 330

 Score =  262 bits (669), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 166/325 (51%), Positives = 232/325 (71%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W N  +A+ + +E   L NA+   K++   + D  ++LE+A++EDD S+  E  
Sbjct: 1   MSDPTFWDNPDKAREISQEATQLKNAVESYKQLVSDIEDANMMLEMAIDEDDLSMESEIK 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +++I+  +E ++   LLSGE D+N+A L  HAGAGGTE+QDW +ML+RMY RWAEK  
Sbjct: 61  EYVKQIEETLEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKSG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E ++   G+EAGIKSAT L+KG NA+G+LK E+GVHRLVRISP+D+ +RRHTSF+++
Sbjct: 121 FSIELMDEQPGDEAGIKSATFLVKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD++EI I   D ++DTYRASGAGGQH+N TDSAVR+TH PTG+VVQCQ +RSQ
Sbjct: 181 DVMPEIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQTQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+ QA  +LRAKL+ELEL+K+ E+      +   I WG QIRSYV  PY +VKD RT+
Sbjct: 241 MQNREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHRTS 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DG+LD F++  L  +
Sbjct: 301 VETGNVQAVMDGNLDPFVEGFLKKE 325


>gi|167038149|ref|YP_001665727.1| peptide chain release factor 2 [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|166856983|gb|ABY95391.1| peptide chain release factor 2 [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
          Length = 330

 Score =  262 bits (669), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 162/325 (49%), Positives = 221/325 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W ++ +++ L ++++ L   +     +  +  D   L+EL LEE D SI  E  
Sbjct: 1   MSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLSTLIELGLEEGDESITDEVD 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + +K ++E  + ++LL+G  D N+A L +HAG+GGTE+QDWA MLLRMYTRWA  + 
Sbjct: 61  KEYKELKKKLEDLKIKTLLNGPYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+ E L+   GEEAGIKS TL+IKGP AYG+LK E GVHRLVRISP+D+  RRHTSF+ +
Sbjct: 121 FEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ IE+EI   D +IDTYRASGAGGQ+VN T+SAVRITH+PTG+VV CQ ERSQ
Sbjct: 181 EVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A  ML+AKL +L +++++E     +    E  WG QIRSYV QPY +VKD RTN
Sbjct: 241 IQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DG++D F+ A L  K
Sbjct: 301 YEVGNVQAVMDGEIDGFINAYLKQK 325


>gi|254437327|ref|ZP_05050821.1| peptide chain release factor 2 [Octadecabacter antarcticus 307]
 gi|198252773|gb|EDY77087.1| peptide chain release factor 2 [Octadecabacter antarcticus 307]
          Length = 375

 Score =  262 bits (669), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 192/354 (54%), Positives = 252/354 (71%), Gaps = 1/354 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           +++ + L+ L    +WD A  RL   N + EDP LW +   A+ LMR+RQ L +AI+  +
Sbjct: 10  VEIEKSLSLLAQRMEWDTASHRLEEFNARVEDPTLWDDPEAAQKLMRDRQSLVDAIASYE 69

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            I+  L D++ L+E+   EDD  I+ E  + L+ +  +   K+ E+LL+GEAD+ND +LE
Sbjct: 70  VIKQELSDHIELIEMGEMEDDSDIVTEAEEALKVLAAKAAKKELEALLNGEADANDTFLE 129

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +++GAGGTE+ DWA ML RMY RWAE++ +K +      GEE GIKSA+  I G NAYGW
Sbjct: 130 INSGAGGTEACDWAAMLARMYIRWAERKGYKVDLQSESAGEEVGIKSASYKISGHNAYGW 189

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E GVHRLVRISP+DS ++RHTSF+S+ VYPVVDD+IEIE++ SD RIDTYR+SGAGG
Sbjct: 190 LKSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVVDDNIEIEVNPSDIRIDTYRSSGAGG 249

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVNTTDSAVRITH PTG+VV    E+SQH+N+  A   L+++LY++EL KR  + N   
Sbjct: 250 QHVNTTDSAVRITHAPTGIVVTSS-EKSQHQNRDIAMKALKSRLYQIELDKRSALVNEVH 308

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +  + GWG QIRSYVLQPYQMVKDLRT  E +    VLDGDLD FM ATLA+ 
Sbjct: 309 ENAGDAGWGNQIRSYVLQPYQMVKDLRTRHETSDTQGVLDGDLDAFMGATLAMD 362


>gi|86133579|ref|ZP_01052161.1| peptide chain release factor 2 [Polaribacter sp. MED152]
 gi|85820442|gb|EAQ41589.1| peptide chain release factor 2 [Polaribacter sp. MED152]
          Length = 367

 Score =  262 bits (669), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 147/351 (41%), Positives = 225/351 (64%), Gaps = 2/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S +++ L    + D  +  ++    KT +P  W +   A+++M+E +     +     I
Sbjct: 10  ISTRIDKLKSYLEIDKKLIEIANEEEKTANPDFWNDPKAAELVMKELRFKKKWVEDYNTI 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
                D ++  E   E++                  +E  +F+++LS E DS  A +++ 
Sbjct: 70  IRLNEDLIVFYEFYKEDEADEKDVVQQYEKT--IALLEDIEFKNMLSDEGDSLSAVIQIT 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA ML RMYT W+EK+ FK + L    G+ AGIK+ T+ ++G  A+GWLK
Sbjct: 128 AGAGGTESCDWAEMLFRMYTMWSEKQGFKLKTLNYQAGDAAGIKTVTVEVEGDYAFGWLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+DSN++RHTSF+S++VYPV DDSIEI+I+ +D  I T R+SGAGGQ+
Sbjct: 188 GENGVHRLVRISPFDSNAKRHTSFASVYVYPVADDSIEIDINPADIEITTARSSGAGGQN 247

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++ V++TH P+G+ + C   RSQH N+A A  ML+++LYE+ELQK++   +  E++
Sbjct: 248 VNKVETKVQLTHKPSGIQISCSNSRSQHDNRATAMQMLKSQLYEIELQKQQAARDDIEAN 307

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K +  WG QIR+YV+ PY++VKD+RT  E  +   V+DG+++ F+KA L +
Sbjct: 308 KMKNEWGSQIRNYVMHPYKLVKDVRTAHETGNVDAVMDGNINAFLKAYLML 358


>gi|72162878|ref|YP_290535.1| peptide chain release factor 2 [Thermobifida fusca YX]
 gi|71916610|gb|AAZ56512.1| bacterial peptide chain release factor 2 (bRF-2) [Thermobifida
           fusca YX]
          Length = 375

 Score =  262 bits (669), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 158/352 (44%), Positives = 220/352 (62%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+  L  +  + D D     +  L  ++ DP LW +   A+ + R    L++ +S ++ 
Sbjct: 12  ELTSTLENIEAVLDLDAKRTEIEQLREQSADPELWNDQANAQKVTRRLSFLESEVSKVEN 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+ R+ D  +L ELA  E+D   L E    L  ++ ++   +  +LLSG  D  +A + +
Sbjct: 72  IRSRIDDLGVLFELAAAENDAETLAEARRELAALRKDISDLEVRTLLSGPYDEREALISI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +A AGG ++ DW  ML RMY RWAE+  + TE  E    EEAGIKS T ++K P AYG L
Sbjct: 132 NAQAGGVDAADWTQMLQRMYLRWAERHGYPTEIYETSYAEEAGIKSTTFVVKAPYAYGML 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           +GE G HRLVRISP+D+ SRR TSF+ + V PVV+ S  IEI ES+ RID YR+SG GGQ
Sbjct: 192 RGEHGTHRLVRISPFDNQSRRQTSFAGVDVVPVVEQSDHIEIDESELRIDVYRSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTG+VV CQ ERSQ +N+A A ++L+AKL E + Q+ E        
Sbjct: 252 GVNTTDSAVRITHLPTGIVVSCQNERSQLQNRATAMSILQAKLLERKRQEEEAELAALRG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
                 WG Q+R+YVL PYQ VKD+RT +E  + S VLDG++D+F+ A +  
Sbjct: 312 ESAR-AWGTQMRNYVLHPYQSVKDIRTGVETGNTSAVLDGEIDEFINAGIRW 362


>gi|304407676|ref|ZP_07389327.1| peptide chain release factor 2 [Paenibacillus curdlanolyticus YK9]
 gi|304343159|gb|EFM09002.1| peptide chain release factor 2 [Paenibacillus curdlanolyticus YK9]
          Length = 329

 Score =  262 bits (668), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 156/325 (48%), Positives = 215/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +  +A+ ++ E   + + +   +++     D   +LE+  EE D S   E +
Sbjct: 1   MTAPDFWDDNDKAQAVISEMNAVKSTVEKYEKLAGDHDDLSTMLEMVEEEGDDSFESELT 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + ++ +   +   +   LL+   D  +A LE+H GAGGTESQDW  ML RMYTRWAEK  
Sbjct: 61  EGVESLVKRISDFELTLLLNQPYDKLNAILELHPGAGGTESQDWGQMLYRMYTRWAEKSG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS T+ IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVELLDYLPGDEAGIKSVTISIKGYNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P ++D IEIEI   D ++DTYRASGAGGQHVN T+SA+RITHIP+G++V CQ +RSQ
Sbjct: 181 DVMPEIEDDIEIEIRTEDLKVDTYRASGAGGQHVNKTESAIRITHIPSGIIVACQTQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+ QA  MLR+KLYE +++++++        +++I WG QIRSYV  PY MVKD RT+
Sbjct: 241 IQNREQAMKMLRSKLYERKIEEQQKHLAEIRGEQSDIAWGSQIRSYVFHPYSMVKDHRTS 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DGDLD F+   L  +
Sbjct: 301 VETGNVGAVMDGDLDAFIDGYLRSQ 325


>gi|262203335|ref|YP_003274543.1| peptide chain release factor 2 [Gordonia bronchialis DSM 43247]
 gi|262086682|gb|ACY22650.1| peptide chain release factor 2 [Gordonia bronchialis DSM 43247]
          Length = 371

 Score =  262 bits (668), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 157/357 (43%), Positives = 224/357 (62%), Gaps = 8/357 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D +   +R+  L  +  DP LW +   A+ +  E  H  +    + E+
Sbjct: 12  LDATLTTVEKVLDLEELRRRIDELEMQASDPDLWNDQEHAQKVTSELSHAQSEFRKVSEL 71

Query: 63  QDRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + RL D  +L EL      +D  S L +   +   ++ ++E  + +++L+GE D  DA +
Sbjct: 72  RQRLDDLPVLYELAEAEEGDDRVSALADADADRAALRADIEAMEVKTMLAGEYDQRDALV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+  +  E  +    EEAG+KSAT  +K P  YG
Sbjct: 132 NIRSGAGGVDAADWALMLMRMYIRWAEQHGYGVEVYDTSYAEEAGLKSATFAVKAPYMYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+ SRR TSF+ + V PVV  +  I+I E+D ++D YR+SG G
Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVQTTDHIDIDENDVKVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+TH+PTG+VV CQ E+SQ +NKA A  +L+AKL E   +KR+E     
Sbjct: 252 GQSVNTTDSAVRLTHLPTGIVVTCQNEKSQLQNKASAMRVLQAKLLE---RKRQEERAEL 308

Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           ++ K + G  WG Q+RSYVL PYQMVKDLRT +E  +PS VLDG+LD F++A +  +
Sbjct: 309 DALKGDGGSSWGNQMRSYVLHPYQMVKDLRTGVEDNNPSAVLDGELDKFIEAGIRWR 365


>gi|319951472|ref|ZP_08025281.1| peptide chain release factor 2 [Dietzia cinnamea P4]
 gi|319434864|gb|EFV90175.1| peptide chain release factor 2 [Dietzia cinnamea P4]
          Length = 368

 Score =  262 bits (668), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 154/352 (43%), Positives = 217/352 (61%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   +  +  + D D   +R+  L     DP LW +   A+ +  E  ++   +   +E+
Sbjct: 12  LDATMTTVEKVLDIDELARRVDELEQMAADPDLWNDQDRAQKVTSELSYIQADLRRCREL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  ++ ELA E +    ++E       ++ +VE  + +++LSGE D  +A + + 
Sbjct: 72  RQRIEDLPLMYELAEE-EGGDAVEEADAERASLREDVEAMEVKTMLSGEYDQREAVVNIR 130

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A ML+RMY RWAEK   K E  +    EEAGIKSAT ++K P  YG L 
Sbjct: 131 AGAGGVDAADFAEMLMRMYVRWAEKNGHKVEVYDTSYAEEAGIKSATFIVKDPYMYGTLS 190

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+    IE+ E++ R+D YR+SG GGQ 
Sbjct: 191 VEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETVDSIEVPENEVRVDVYRSSGPGGQS 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL E + Q+     +    S
Sbjct: 251 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMKVLQAKLLERKRQEERAAMDAL-GS 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                WG Q+RSYVL PYQMVKDLRT  E  +PS VLDGD+D F++A +  +
Sbjct: 310 GGNASWGNQMRSYVLHPYQMVKDLRTEHEVNNPSAVLDGDIDGFIEAGIRWR 361


>gi|297183299|gb|ADI19436.1| protein chain release factor b [uncultured bacterium HF0500_16O16]
          Length = 361

 Score =  262 bits (668), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 164/346 (47%), Positives = 227/346 (65%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG+FD +   + L+ L+ +      W +   A+ + +E + L +     +E++ RL D 
Sbjct: 14  FGGIFDIETRQKTLASLDEEMASNEFWNDRQRAEQVTKEARTLRDLTQPWQELKGRLDDL 73

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LLEL+ +EDD   L++    L  +   +   +F S+LS E D  DA L +H+GAGGTE
Sbjct: 74  AELLELSADEDDADTLKDLQIELSDVDETLGELEFFSMLSDEDDPKDALLVIHSGAGGTE 133

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           + DWA ML+RMY RW E+R F +E +++  G+EAGIK AT+ +KG  AYG+LK E GVHR
Sbjct: 134 AADWAEMLMRMYGRWIERRGFTSEIMDLQPGDEAGIKGATIEVKGSYAYGYLKAEAGVHR 193

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+D+N RRHTSF+S++VYP VD   ++E+ + D +IDTY+A GAGGQHVN T SA
Sbjct: 194 LVRISPFDANKRRHTSFASVFVYPDVDSIPDVELRDEDLQIDTYKAGGAGGQHVNKTSSA 253

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV CQ ERSQ KNK  A  +L A+LY+   Q+  +     ES+K  I +G
Sbjct: 254 VRITHLPTGIVVNCQNERSQLKNKGTAMKVLTARLYDHYKQEEMKKMEAVESTKKAIDFG 313

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            QIRSYV QPY +VKD RT  E  +   ++DGDLD F+ A L+  +
Sbjct: 314 SQIRSYVFQPYTLVKDHRTGHESGNVQAIMDGDLDGFINAFLSAAQ 359


>gi|284023776|ref|ZP_06378174.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           132]
          Length = 331

 Score =  262 bits (668), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 159/326 (48%), Positives = 215/326 (65%), Gaps = 1/326 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              +P+ W N  +A+ ++ +   L   ++  K +Q  + D     +L  EE D  + ++ 
Sbjct: 1   MMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              +   K +V+  + + LL G  D+N+A LE+H GAGGTESQDWANML RMY R+ EK+
Sbjct: 61  EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKK 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S
Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180

Query: 209 IWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
             V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH P+G+VV  Q ER
Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNER 240

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KN+  A  ML++KLY+L+L+++          + EIGWG QIRSYV  PY MVKD R
Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAI 353
           TN E      V+DGD+  F+++ L  
Sbjct: 301 TNEETGKVDAVMDGDIRPFIESYLRQ 326


>gi|157964348|ref|YP_001499172.1| peptide chain release factor 2 [Rickettsia massiliae MTU5]
 gi|157844124|gb|ABV84625.1| Peptide chain release factor RF-2 [Rickettsia massiliae MTU5]
          Length = 337

 Score =  262 bits (668), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 182/328 (55%), Positives = 238/328 (72%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L   T +P LW +   A+ L+RE+ +L+  ++   +++  L D L L E+A  E+D   L
Sbjct: 4   LEELTANPSLWNDQANAQKLLREKSNLEEKLNAFNKLKSNLKDALELEEMAEAENDLETL 63

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            +   +L+ + +     + E L SGEAD N+ +LE++AGAGGTES DWA++++RMY R+A
Sbjct: 64  SQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEINAGAGGTESHDWASIMMRMYLRFA 123

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+  FKTE + + +GEEAGIKS T+ I G  AYGW K E GVHRLVRISP+++  +R TS
Sbjct: 124 ERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTEAGVHRLVRISPFNAAGKRMTS 183

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S WVYP +DD+I I I + D RIDT+RASGAGGQHVNTTDSAVRITHIPTG V QCQ 
Sbjct: 184 FASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITHIPTGTVTQCQS 243

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +RSQHKNKAQA  ML+AKLYELE+QKR +  N   ++KT+  WG QIRSYVLQPYQMVKD
Sbjct: 244 DRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWGHQIRSYVLQPYQMVKD 303

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           LRT+ E +    VLDGDL++F+ A LA+
Sbjct: 304 LRTDYETSDTKGVLDGDLEEFVSANLAM 331


>gi|329936498|ref|ZP_08286234.1| peptide chain release factor 2 [Streptomyces griseoaurantiacus
           M045]
 gi|329304013|gb|EGG47895.1| peptide chain release factor 2 [Streptomyces griseoaurantiacus
           M045]
          Length = 368

 Score =  262 bits (668), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 158/353 (44%), Positives = 219/353 (62%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW N  EA+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQAEVRKAEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD     E    L  ++  ++  +  +LLSGE DS +A + + 
Sbjct: 73  RGRIDDLGVLFEMAEEEDDPDTRAEAESELTAVRKALDEMEVRTLLSGEYDSREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+R +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAVQAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISPYD+  RR TSF+ + + PVV+ +  +EI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPYDNQGRRQTSFAGVEILPVVEQTDHVEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   +  +  
Sbjct: 253 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT+ E  +P  V +G++D F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTDFEVGNPEAVFNGEIDGFLEAGIRWRK 364


>gi|290890028|ref|ZP_06553113.1| hypothetical protein AWRIB429_0503 [Oenococcus oeni AWRIB429]
 gi|290480375|gb|EFD89014.1| hypothetical protein AWRIB429_0503 [Oenococcus oeni AWRIB429]
          Length = 372

 Score =  262 bits (668), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 162/353 (45%), Positives = 213/353 (60%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  Q++      D D     ++    K   P  W +   A+ ++ E   L N       +
Sbjct: 13  MQEQIDGFRSTLDLDALDASIAENEDKMSQPGFWDDQQSAQKIIDETNTLKNRRDSFLSL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           Q  + D   + EL  EEDD  +  E   ++++ + ++E      LL+ + DSN+A LE+H
Sbjct: 73  QKSVEDLTAMAELLSEEDDADMHAELDTDIEKTEKDLEKYNLNQLLTEKYDSNNAILEIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            G GGTES DWA+ L RMYTRWA+   FK E  +   G+ AGI SATL I G NAYG+L+
Sbjct: 133 PGEGGTESTDWASNLYRMYTRWAQAHDFKVEVTDYQTGDVAGIDSATLRIIGHNAYGFLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241
            E+GVHR VRISP+DS  RRHTSF SI V P   DD IEIEI   D ++D YR+ GAGGQ
Sbjct: 193 SEKGVHRFVRISPFDSAGRRHTSFVSIDVMPELDDDEIEIEIKPQDVKMDVYRSGGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN   +AVR+THIPTG+VV  Q ER+Q+ N+  A  ML+AKLYE E QKREE       
Sbjct: 253 NVNKVSTAVRLTHIPTGIVVASQVERTQYGNRDIAMKMLKAKLYEREEQKREEEHAKLSG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +K ++ WG QIRSYV QPY+MVKDLR+  E      V+DG+LD F+ A L  K
Sbjct: 313 TKLDVAWGSQIRSYVFQPYRMVKDLRSGYETGDTDGVMDGNLDPFINAYLKWK 365


>gi|116490620|ref|YP_810164.1| peptide chain release factor 2 [Oenococcus oeni PSU-1]
 gi|122277196|sp|Q04GC3|RF2_OENOB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|116091345|gb|ABJ56499.1| bacterial peptide chain release factor 2 (bRF-2) [Oenococcus oeni
           PSU-1]
          Length = 372

 Score =  262 bits (668), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 162/353 (45%), Positives = 213/353 (60%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  Q++      D D     ++    K   P  W +   A+ ++ E   L N       +
Sbjct: 13  MQEQIDGFRSTLDLDALDASIAENEDKMSQPGFWDDQQSAQKIIDETNTLKNRRDSFLSL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           Q  + D   + EL  EEDD  +  E   ++++ + ++E      LL+ + DSN+A LE+H
Sbjct: 73  QKSVEDLTAMAELLSEEDDADMHAELDTDIEKTEKDLEKYNLNQLLTEKYDSNNAILEIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            G GGTES DWA+ L RMYTRWA+   FK E  +   G+ AGI SATL I G NAYG+L+
Sbjct: 133 PGEGGTESTDWASNLYRMYTRWAQAHDFKVEVTDYQTGDVAGIDSATLRIIGHNAYGFLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241
            E+GVHR VRISP+DS  RRHTSF SI V P   DD IEIEI   D ++D YR+ GAGGQ
Sbjct: 193 SEKGVHRFVRISPFDSAGRRHTSFVSIDVMPELDDDEIEIEIKPQDVKMDVYRSGGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN   +AVR+THIPTG+VV  Q ER+Q+ N+  A  ML+AKLYE E QKREE       
Sbjct: 253 NVNKVSTAVRLTHIPTGIVVASQVERTQYGNRDIAMKMLKAKLYEQEEQKREEEHAKLSG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +K ++ WG QIRSYV QPY+MVKDLR+  E      V+DG+LD F+ A L  K
Sbjct: 313 TKLDVAWGSQIRSYVFQPYRMVKDLRSGYETGDTDGVMDGNLDPFINAYLKWK 365


>gi|294629650|ref|ZP_06708210.1| peptide chain release factor 2 [Streptomyces sp. e14]
 gi|292832983|gb|EFF91332.1| peptide chain release factor 2 [Streptomyces sp. e14]
          Length = 371

 Score =  262 bits (668), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 156/353 (44%), Positives = 219/353 (62%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW N  EA+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQAEVRKAEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD     E    L  ++  ++  +  +LLSGE D+ +A + + 
Sbjct: 73  RGRIDDLAVLFEMAEEEDDPDTRAEAESELTAVRKALDEMEVRTLLSGEYDAREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+R +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAVQAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + + PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   +  +  
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT+ E  +P  V +G++D F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTDFEVGNPEAVFNGEIDGFLEAGIRWRK 364


>gi|302875854|ref|YP_003844487.1| peptide chain release factor 2 [Clostridium cellulovorans 743B]
 gi|302578711|gb|ADL52723.1| peptide chain release factor 2 [Clostridium cellulovorans 743B]
          Length = 369

 Score =  262 bits (668), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 161/350 (46%), Positives = 228/350 (65%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS+ +  +G L D       L  L    ++   W N+  A+ +    + + + I     
Sbjct: 13  ELSKTIEEMGALLDIPKLTLTLEELEGSMQESGFWDNLERAQSVTARAKGIKDRIDLYNN 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            Q  + D  +L+E+A+EE+D S++ E  + +  +   VE  + E +LSGE D+N+A + +
Sbjct: 73  FQSSVEDIKVLIEMAIEENDSSLVTEVYNEISTLSDSVENLRLELMLSGEYDTNNAIVTL 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H+G GGT++ DW  MLLRMYTRW EK+ F  E L++  G+EAGIKSATL + G  AYG+L
Sbjct: 133 HSGVGGTDAMDWTEMLLRMYTRWCEKKAFNVETLDLQVGDEAGIKSATLKVTGLYAYGYL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+G+HRLVRISP+++N +R TSF+S+ V P +     +EI+ SD ++DTYRASGAGGQ
Sbjct: 193 KAEKGIHRLVRISPFNANGKRQTSFASLEVTPELRQDQNVEINPSDLKVDTYRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SA+RITHIPTG+VVQCQ ERSQ +N+  A NML++KL EL+ +  +E       
Sbjct: 253 HVNKTESAIRITHIPTGIVVQCQNERSQIQNRETALNMLKSKLVELKERAHKEKIEDLTG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              ++GWG QIRSYV  PY MVKD RTNI+      V+DG+LD F+K  L
Sbjct: 313 DLKDMGWGSQIRSYVFHPYTMVKDHRTNIQVNDVYKVMDGELDVFIKGYL 362


>gi|291287317|ref|YP_003504133.1| peptide chain release factor 2 [Denitrovibrio acetiphilus DSM
           12809]
 gi|290884477|gb|ADD68177.1| peptide chain release factor 2 [Denitrovibrio acetiphilus DSM
           12809]
          Length = 371

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 175/350 (50%), Positives = 244/350 (69%), Gaps = 3/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTK-TEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           L + +N      + D   + +S ++     DP+ W N  E+K+LM+E+      +    E
Sbjct: 13  LKKDINSFRTAMNEDELKKAISEVDNLSMSDPNFW-NSKESKVLMKEQAINKKKLEEWHE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D  +L+EL  E +   +  +   +++ ++  + + + + +LSG+ D N+A + +
Sbjct: 72  LTGLLEDTEVLIELYKEGEQ-GVEADIETSIRTLEKTIAHFELKLVLSGQNDGNNAIITI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTE+ DWA ML RMYT +AE+  +K + L+  +GEEAGIK+AT+ IKG   YG+L
Sbjct: 131 NSGAGGTEANDWAAMLYRMYTHYAERNGYKCDILDYMEGEEAGIKNATINIKGAFTYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE GVHRLVRISPYDS +RRHTSF++++V P ++D IEI+ISE+D  IDTYRASGAGGQ
Sbjct: 191 KGETGVHRLVRISPYDSANRRHTSFAAVFVMPEIEDDIEIDISEADLHIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITH+PTG VV CQ ERSQHKNKA A  +L+++LYELE+ K+ E     ES
Sbjct: 251 HVNTTDSAVRITHVPTGTVVTCQSERSQHKNKAHAMKILKSRLYELEIDKKNEEKQKLES 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +KTEIGWG QIRSYV+ PY+MVKDLRT  E  +   V+DG+LD F++A L
Sbjct: 311 TKTEIGWGNQIRSYVMHPYKMVKDLRTRHETGNVDAVMDGNLDAFIRAYL 360


>gi|294340483|emb|CAZ88864.1| Peptide chain release factor 2 (RF-2) [Thiomonas sp. 3As]
          Length = 331

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 165/328 (50%), Positives = 235/328 (71%), Gaps = 1/328 (0%)

Query: 25  FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84
            +    EDP +W +   A+ L RER+ L+  +  ++ +   L D+  L E++ EE D + 
Sbjct: 2   EVAGALEDPQVWNDPKRAQELGRERKSLETVVLGLESLTTALADHSELFEMSREEGDDAT 61

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
            +    ++++   EVE  +F  + S   D ++ ++++ AGAGGTE+ DWA+MLLR Y R+
Sbjct: 62  CEAIEADVEKSADEVEALEFRRMFSNPLDPSNCFIDIQAGAGGTEACDWASMLLRQYLRY 121

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
            E++ FKTE +E  +G+ AGI+SAT+ ++G  AYG L+ E GVHRLVR SP+DS+  RHT
Sbjct: 122 CERKGFKTEVMEETEGDVAGIRSATIKVEGDYAYGQLRTETGVHRLVRKSPFDSSGGRHT 181

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           SF+S++VYP VDDSIEI+I+ +D R DT+RASGAGGQH+N TDSAVR+THIPTG+VVQCQ
Sbjct: 182 SFASVFVYPEVDDSIEIDINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIVVQCQ 241

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
            +RSQHKN+A+AW MLR++LYE E++KR       ES+K+++GWG QIRSYVL     +K
Sbjct: 242 NDRSQHKNRAEAWQMLRSRLYEHEMRKRMAEQQTLESTKSDVGWGHQIRSYVLD-QSRIK 300

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           DLRTN+E ++   VLDGDLD+F+ A+L 
Sbjct: 301 DLRTNVEISNTQKVLDGDLDEFITASLK 328


>gi|302551795|ref|ZP_07304137.1| peptide chain release factor 2 [Streptomyces viridochromogenes DSM
           40736]
 gi|302469413|gb|EFL32506.1| peptide chain release factor 2 [Streptomyces viridochromogenes DSM
           40736]
          Length = 368

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 159/353 (45%), Positives = 218/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW N  EA+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQAEVRKAEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD     E    L  ++  ++  +  +LLSGE DS +A + + 
Sbjct: 73  RGRIDDLAVLFEMAEEEDDPDTRAEAESELAAVRKALDEMEVRTLLSGEYDSREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+R +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQRGYKTEIYETSYAEEAGIKSTTFAVQAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   +  +  
Sbjct: 253 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWRK 364


>gi|118586958|ref|ZP_01544390.1| peptide chain release factor 2 [Oenococcus oeni ATCC BAA-1163]
 gi|118432580|gb|EAV39314.1| peptide chain release factor 2 [Oenococcus oeni ATCC BAA-1163]
          Length = 378

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 162/353 (45%), Positives = 213/353 (60%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  Q++      D D     ++    K   P  W +   A+ ++ E   L N       +
Sbjct: 19  MQEQIDGFRSTLDLDALDASIAENEDKMSQPGFWDDQQSAQKIIDETNTLKNRRDSFLSL 78

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           Q  + D   + EL  EEDD  +  E   ++++ + ++E      LL+ + DSN+A LE+H
Sbjct: 79  QKSVEDLTAMAELLSEEDDADMHAELDTDIEKTEKDLEKYNLNQLLTEKYDSNNAILEIH 138

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            G GGTES DWA+ L RMYTRWA+   FK E  +   G+ AGI SATL I G NAYG+L+
Sbjct: 139 PGEGGTESTDWASNLYRMYTRWAQAHDFKVEVTDYQTGDVAGIDSATLRIIGHNAYGFLR 198

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241
            E+GVHR VRISP+DS  RRHTSF SI V P   DD IEIEI   D ++D YR+ GAGGQ
Sbjct: 199 SEKGVHRFVRISPFDSAGRRHTSFVSIDVMPELDDDEIEIEIKPQDVKMDVYRSGGAGGQ 258

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN   +AVR+THIPTG+VV  Q ER+Q+ N+  A  ML+AKLYE E QKREE       
Sbjct: 259 NVNKVSTAVRLTHIPTGLVVASQVERTQYGNRDIAMKMLKAKLYEREEQKREEEHAKLSG 318

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +K ++ WG QIRSYV QPY+MVKDLR+  E      V+DG+LD F+ A L  K
Sbjct: 319 TKLDVAWGSQIRSYVFQPYRMVKDLRSGYETGDTDGVMDGNLDPFINAYLKWK 371


>gi|289523219|ref|ZP_06440073.1| peptide chain release factor 2 [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503762|gb|EFD24926.1| peptide chain release factor 2 [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 355

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 167/345 (48%), Positives = 229/345 (66%), Gaps = 1/345 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G +FD D     +  L  KT  P  W +   A+ + ++  HL + +   ++++    +  
Sbjct: 4   GKVFDVDTLESEIKALIDKTSSPDFWNSSD-AQKVTQKLSHLQDLLGQWQKMKAEWEELE 62

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           +L EL  E +D  ++ E  D   R++ E+   + E LL  E D ++A L VHAGAGG ++
Sbjct: 63  VLTELLNETEDEELIGEFYDKASRLRKEINSMEMELLLDEEYDESNAILTVHAGAGGLDA 122

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMY RWAE+  ++T+ ++I   EEAGIK AT+LIKG  +YG+LK E+G+HRL
Sbjct: 123 QDWAEMLLRMYLRWAERHNYETKVIDILPDEEAGIKYATILIKGICSYGYLKAEKGIHRL 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+DS+ RRHTSF+SI V P + D  +IEI   + R++T+RASGAGGQ+VN TDSAV
Sbjct: 183 VRISPFDSSKRRHTSFASIEVIPELPDDADIEIRPEEIRMETFRASGAGGQYVNMTDSAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+ HIPTG+VV CQ ERSQH N+  A  +L+AKLYE   Q+++++ +     K EIGWG 
Sbjct: 243 RLIHIPTGIVVTCQNERSQHMNRQVAMQLLKAKLYERRQQEKQKMLDDLHGEKKEIGWGS 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           QIRSYVL PY MVKD RT     S   VLDGD+DDF+ A L ++K
Sbjct: 303 QIRSYVLHPYTMVKDHRTGYTSYSVDAVLDGDIDDFVIAYLRMRK 347


>gi|163942871|ref|YP_001647755.1| peptide chain release factor 2 [Bacillus weihenstephanensis KBAB4]
 gi|229014346|ref|ZP_04171465.1| Peptide chain release factor 2 [Bacillus mycoides DSM 2048]
 gi|229063835|ref|ZP_04200139.1| Peptide chain release factor 2 [Bacillus cereus AH603]
 gi|229135993|ref|ZP_04264753.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST196]
 gi|229169892|ref|ZP_04297588.1| Peptide chain release factor 2 [Bacillus cereus AH621]
 gi|163865068|gb|ABY46127.1| peptide chain release factor 2 [Bacillus weihenstephanensis KBAB4]
 gi|228613606|gb|EEK70735.1| Peptide chain release factor 2 [Bacillus cereus AH621]
 gi|228647451|gb|EEL03526.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST196]
 gi|228716472|gb|EEL68176.1| Peptide chain release factor 2 [Bacillus cereus AH603]
 gi|228746946|gb|EEL96830.1| Peptide chain release factor 2 [Bacillus mycoides DSM 2048]
          Length = 326

 Score =  261 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 162/325 (49%), Positives = 217/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
                 W +   A+ ++ E   L + +   +++ +   +  +  +L  EE D  + +E  
Sbjct: 1   MMGAGFWDDQQGAQAVINEANALKDMVGRFRQLDETFENLEMTHDLLKEEYDEDLHEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR+
Sbjct: 61  SEVKTLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRR 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D +EIE+   D +IDTYRASGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQ
Sbjct: 181 EVVPEFNDEVEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHLPTNTVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+  A  ML+AKLY+ +L++++   +     + EIGWG QIRSYV  PY +VKD RTN
Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DG+++ F+ A L  +
Sbjct: 301 TEVGNVQAVMDGEINPFIDAYLRSR 325


>gi|15836107|ref|NP_300631.1| peptide chain release factor 2 [Chlamydophila pneumoniae J138]
 gi|8978947|dbj|BAA98782.1| peptide chain release factor 2 [Chlamydophila pneumoniae J138]
          Length = 350

 Score =  261 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 161/344 (46%), Positives = 224/344 (65%), Gaps = 1/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           + GLFD D   + L  L  ++ + + WQ+ + A  +  +   L   I   +E++ ++   
Sbjct: 1   MRGLFDLDKKQKELQVLEEESSEENFWQDSVHAGKISEQIVSLRRQIQEYQELKSKIDAI 60

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              LE A   +D +I ++        + ++   + + LLSGEAD N  +L ++AGAGGTE
Sbjct: 61  EFFLEDADALEDPAICEDLEKEFLFCEKKLAVWETQRLLSGEADKNSCFLTINAGAGGTE 120

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           S DW  ML RMY+RWA K ++  E ++  DGE  GIK  T+   G  AYG+ K E+GVHR
Sbjct: 121 SCDWVEMLFRMYSRWATKHQWALEVVDRLDGEVVGIKHVTVKFSGMYAYGYAKAERGVHR 180

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+DSN +RHTSF+S+ V+P +DD I+IEI  +D RIDT+R+SGAGGQHVN T+SA
Sbjct: 181 LVRISPFDSNGKRHTSFASVDVFPEIDDQIKIEIRPNDLRIDTFRSSGAGGQHVNVTESA 240

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+P+GVVV CQ ERSQ +N+     ML+AKLY+  LQ+R E  ++    K EI WG
Sbjct: 241 VRITHLPSGVVVSCQNERSQIQNRESCMKMLQAKLYQQVLQERLEKQSLDRKDKKEIAWG 300

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
            QIR+YV QPY +VKD+RT  E  +   +LDG+ LD+F+KA LA
Sbjct: 301 SQIRNYVFQPYTLVKDVRTGHETGNVQAMLDGELLDEFIKAYLA 344


>gi|332971716|gb|EGK10664.1| peptide chain release factor RF2 [Desmospora sp. 8437]
          Length = 331

 Score =  261 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 169/325 (52%), Positives = 228/325 (70%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ ++ E  HL   +  +KE+++   +  ++ EL  EEDD S+L E  
Sbjct: 1   MTDPAFWNDQGKAQKVIDENNHLKGIVQGVKELEEAHEELQVIAELIAEEDDESMLPEAE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L+ +K +++  +   LLS   D N A LE+H GAGGTESQDWA +LLRMYTRWAE R 
Sbjct: 61  EGLKDLKRKLDEFELSLLLSDPYDKNSAILELHPGAGGTESQDWAQILLRMYTRWAEHRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K E L+   GEEAG+KS TLLIKG NAYG+L+ E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 YKVETLDFLPGEEAGVKSVTLLIKGHNAYGYLRAEKGVHRLVRISPFDSSGRRHTSFVSA 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P ++D  EIEI   D +IDTYR+SGAGGQHVNTTDSAVRITH+PT +VV CQ ERSQ
Sbjct: 181 NVMPEIEDDDEIEIRSEDIKIDTYRSSGAGGQHVNTTDSAVRITHLPTNIVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A  +L+A+L E +++++++     +  +TEIGWG QIRSYV  PY MVKD RT 
Sbjct: 241 IKNRDRAMKILKARLVERQMEEKQKEIAELKGEQTEIGWGNQIRSYVFHPYSMVKDHRTQ 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DG++D F++A L  +
Sbjct: 301 VEVGNVQSVVDGEIDTFIEAYLRQQ 325


>gi|114776305|ref|ZP_01451350.1| peptide chain release factor 2 [Mariprofundus ferrooxydans PV-1]
 gi|114553135|gb|EAU55533.1| peptide chain release factor 2 [Mariprofundus ferrooxydans PV-1]
          Length = 372

 Score =  261 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 182/342 (53%), Positives = 233/342 (68%), Gaps = 1/342 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG FD D   + L  LN + EDP LW    EA+ LM+E+  ++  +       + L D L
Sbjct: 23  GGHFDVDAREEELRELNARIEDPTLWDRPEEAQKLMQEKTRIERTLQTFHNSTEALDDAL 82

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L E+  EE D     E  + L  ++ E+E  +   +L GE D+  A+L+++AG+GGTE+
Sbjct: 83  TLFEMGAEESDPDTQMEAVETLDSVQAELEALELARMLGGETDAESAFLDINAGSGGTEA 142

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMY RWAE++ FKTE +E   GEEAGIKSAT+ IKG  AYG+LK E GVHRL
Sbjct: 143 QDWAEMLLRMYLRWAERKGFKTELMECTAGEEAGIKSATVSIKGEYAYGFLKAEVGVHRL 202

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SPYDS +RRHTSF+S++ YP ++  IEI+I  SD R DTYRASGAGGQH+N TDSAV
Sbjct: 203 VRKSPYDSGNRRHTSFASVFAYPDIEKDIEIDIDPSDVRTDTYRASGAGGQHINKTDSAV 262

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+TH+PT +VVQCQ +RSQHKN+A AW+ML+A+LYE EL  R       E  KT+IGWG 
Sbjct: 263 RLTHVPTNIVVQCQNDRSQHKNRAAAWSMLKARLYEHELNLRNAEKQEIEDGKTDIGWGH 322

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYVL     +KDLRT +E  +    LDGD+D F++A L 
Sbjct: 323 QIRSYVLD-QSRIKDLRTGMETGNTQAFLDGDIDAFIQAELM 363


>gi|294812911|ref|ZP_06771554.1| Peptide chain release factor 2 [Streptomyces clavuligerus ATCC
           27064]
 gi|326441313|ref|ZP_08216047.1| peptide chain release factor 2 [Streptomyces clavuligerus ATCC
           27064]
 gi|294325510|gb|EFG07153.1| Peptide chain release factor 2 [Streptomyces clavuligerus ATCC
           27064]
          Length = 368

 Score =  261 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 161/355 (45%), Positives = 220/355 (61%), Gaps = 5/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +     HL   +   + +
Sbjct: 13  LSSTMGSIESVLDLDRMRADIAVLEEQAAAPSLWDDPEAAQKITSRLSHLQAELRKTEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA  EDD   L E    L  ++  ++  +  +LLSGE D  +A + + 
Sbjct: 73  RARIDDLGVLFELAEAEDDADTLAEAETELAAVRKALDEMEVRTLLSGEYDEREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  + TE  E    EEAGIKS T ++K P AYG L 
Sbjct: 133 AEAGGVDASDFAERLQRMYMRWAERHGYATEIYETSYAEEAGIKSTTFVVKAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ S  +EI E++ R+D YRASG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQSDHVEIDETELRVDVYRASGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV CQ ERSQ +NKA A N+L+AKL E   ++R+E     ++ 
Sbjct: 253 VNTTDSAVRITHIPTGIVVSCQNERSQIQNKASAMNVLQAKLLE---RRRQEEQARMDAL 309

Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K + G  WG Q+RSYVL PYQMVKDLRT  E  +P  VLDG++D F++A +  ++
Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLEAAIRWRR 364


>gi|298528152|ref|ZP_07015556.1| hypothetical protein Dthio_PD3135 [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298511804|gb|EFI35706.1| hypothetical protein Dthio_PD3135 [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 368

 Score =  261 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 153/350 (43%), Positives = 226/350 (64%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
           ++ +   G  D ++  QRL  +  +   P  W +  +   +++E+  L+ ++S  +++  
Sbjct: 17  QRFSSFWGRLDLESQKQRLEEIEHELSRPGAWDSPEKLTPILKEKSGLEESVSKYEQLHS 76

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              +    LE A  +    +LQ   D+L+ +  ++E  + E+LLSG+ D+N A + +H G
Sbjct: 77  LQEEVREWLEFADNDQSGEVLQALEDSLETLSRQLEKVELEALLSGKDDNNPAIVSIHPG 136

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGGTE+QDW  MLLRMYTRWAE + FK + L+   G+EAG+KS TL + G  AYG LK E
Sbjct: 137 AGGTEAQDWVEMLLRMYTRWAESKGFKLDYLDYLPGDEAGVKSVTLQVTGEYAYGLLKSE 196

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           +G+HRL+RISP+D++ RRHTSF+S+ VYP V D I IE+ E D R+D ++ASG GGQHVN
Sbjct: 197 RGIHRLIRISPFDASGRRHTSFASVDVYPQVSDDINIEVKEEDMRVDVFKASGPGGQHVN 256

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T SA+RITH+PTG+VVQCQ ERSQ +N+  A  +L+AKLY+ E++K E+      ++K 
Sbjct: 257 KTSSAIRITHMPTGIVVQCQSERSQRRNRDAALKILKAKLYDEEMKKLEDERQEKYAAKD 316

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            I WG QIR+Y L  Y++VKD R N E      VLDG++D  ++  L  +
Sbjct: 317 SIAWGSQIRTYTLHSYRLVKDHRNNTEIYDVDSVLDGNIDTLIRNYLLYR 366


>gi|295092740|emb|CBK78847.1| bacterial peptide chain release factor 2 (bRF-2) [Clostridium cf.
           saccharolyticum K10]
          Length = 333

 Score =  261 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 153/324 (47%), Positives = 220/324 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E+P  W +   +  LMRE ++L + +   ++++    D  ++LE+  EE+D S++ E  
Sbjct: 1   MEEPGFWDDPETSTKLMREAKNLKDTVENYRKLEQEYEDIQVMLEMGYEENDPSLIPEIQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             +     ++E  + ++LLSGE D+N+A L+++AGAGGTE+ DW +ML RMY RW++K+ 
Sbjct: 61  GMMDDFVAKLEAIRIQTLLSGEYDNNNAILKLNAGAGGTEACDWCSMLYRMYQRWSDKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F T  ++  DGEEAGIKS TL I G NAYG+LK E+GVHRLVRISP++S  +R TSF S 
Sbjct: 121 FTTSVIDYLDGEEAGIKSITLQINGENAYGFLKSERGVHRLVRISPFNSAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + + +++EI+  + RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQ
Sbjct: 181 DVMPDIKEDLDVEINPDELRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK  A  ML+ KLY ++ ++  E  +       +I +G QIRSYV+QPY +VKD RT 
Sbjct: 241 FQNKEVAMQMLKTKLYMMKQEEHAEKLSDIRGDVKDINFGNQIRSYVMQPYTLVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  + + VLDGD+D F+ A L  
Sbjct: 301 AESGNVNAVLDGDIDLFISAYLKW 324


>gi|238063024|ref|ZP_04607733.1| peptide chain release factor 2 [Micromonospora sp. ATCC 39149]
 gi|237884835|gb|EEP73663.1| peptide chain release factor 2 [Micromonospora sp. ATCC 39149]
          Length = 373

 Score =  261 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 160/356 (44%), Positives = 223/356 (62%), Gaps = 5/356 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D D   +  + L  +   P LW +  +A+ +  +  +++  I  +  
Sbjct: 12  ELDAILRNIEAVLDLDRLHEDKARLEEQASAPDLWDDQAKAQQVTSQLSYVNGEIDKLGS 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  +LLELA  EDD  +L E    +  +   ++  +  +LLSGE DS +A + +
Sbjct: 72  LRSRLDDARVLLELAEAEDDPGVLAEVETEIGALTKSIQDMEVRTLLSGEYDSREALVAI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG ++ D+A MLLRMY RWAE+  + TE  E    EEAG+KSAT  +K P AYG L
Sbjct: 132 RAGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFAVKVPYAYGTL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+ + V PV + +  I+I E++ R+D YR+SG GGQ
Sbjct: 192 SVESGTHRLVRISPFDNQGRRQTSFAGVEVLPVTEQTDHIDIPENEVRVDVYRSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+A+L E   +KR+E       
Sbjct: 252 SVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASALRVLQARLLE---RKRQEEQAKLNG 308

Query: 302 SKTEI--GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            KT+    WG Q+RSYVL PYQMVKDLRT  E  +PS V DG+LD F++A +  +K
Sbjct: 309 LKTDAAGSWGDQMRSYVLHPYQMVKDLRTEQETGNPSAVFDGELDSFIEAGIRWRK 364


>gi|291439311|ref|ZP_06578701.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
 gi|291342206|gb|EFE69162.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
          Length = 368

 Score =  261 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 157/353 (44%), Positives = 216/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW N  EA+ +     HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDRMRADIAVLEEQAAAPSLWDNPDEAQKITSRLSHLQAEVRKAEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD     E    L  ++  ++  +  +LLSGE D+ +A + + 
Sbjct: 73  RGRIDDLAVLFEMAEEEDDPDTRAEAEAELADVRKALDEMEVRTLLSGEYDAREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ S  ++I ESD R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQSDHVDIDESDLRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV CQ ERSQ +N+A A N+L+AKL E   Q+ +   +  +  
Sbjct: 253 VNTTDSAVRITHIPTGIVVSCQNERSQIQNRATAMNVLQAKLLERRRQEEQAKMDALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWRK 364


>gi|256545449|ref|ZP_05472811.1| peptide chain release factor 2, programmed [Anaerococcus vaginalis
           ATCC 51170]
 gi|256398845|gb|EEU12460.1| peptide chain release factor 2, programmed [Anaerococcus vaginalis
           ATCC 51170]
          Length = 369

 Score =  261 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 155/354 (43%), Positives = 224/354 (63%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L+ +G   + +     +  +  +T + + W +  +A+ +M +     +       
Sbjct: 13  ELDKNLDMIGSHLNPEKLNTEIKEIEKQTLEENFWDDSQKAQEIMADLSDKKDNFKTFTS 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLE 120
            ++ L D   LL++  E ++        + +    K E+   + ++ L GE D N+AYL 
Sbjct: 73  FKEELKDQSDLLDIIEESNEDLESLNEIEEILNSLKKEIGSFKIKTELDGEYDKNNAYLV 132

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +HAGAGG E+ DWA ML+RMYTR+ EKR FK +  ++++ E  GIKSAT+ +KG  AYG+
Sbjct: 133 IHAGAGGLEATDWAEMLMRMYTRFFEKRNFKFDVTDLNNEEAGGIKSATIHVKGSFAYGY 192

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LKGE+GVHRLVRISP+DS+ RRHTSF+S+ ++P ++D + +EI   D RIDTYRASGAGG
Sbjct: 193 LKGEKGVHRLVRISPFDSSKRRHTSFASVDIFPELNDDMSVEIDPKDLRIDTYRASGAGG 252

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVN TDSAVRITHIPTGV+   Q ERSQ +NK  A  +L AKL +++ ++  E     +
Sbjct: 253 QHVNKTDSAVRITHIPTGVIASSQAERSQTQNKETAMKLLLAKLTQIKEEEHREKIEDIQ 312

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + T+I WG QIRSYV  PY +VKD RTN E  +   V+DGD+D F+   LA K
Sbjct: 313 GNYTQIAWGNQIRSYVFHPYTLVKDHRTNFEVGNVESVMDGDIDGFIDEYLANK 366


>gi|332638053|ref|ZP_08416916.1| peptide chain release factor 2 [Weissella cibaria KACC 11862]
          Length = 332

 Score =  261 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 159/325 (48%), Positives = 212/325 (65%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W + + A+ ++     L         +   + +    LEL  E  D  +  E  
Sbjct: 1   MAQPDFWNDNVAAQKVIDANNILKGRRDDYLNLTAGVENVETALELLAEMPDEDMQAEME 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L+++  ++E  +   LL+   D N+A LE+H G+GGTES DW   L RMYTRWAE+  
Sbjct: 61  ADLEKLAADLESYRLAQLLNEPYDKNNAILEIHPGSGGTESADWGANLQRMYTRWAERHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++ H G+ AGI SATL+I G NAYG+L+ E+GVHR VRISP+DS  RRHTSF SI
Sbjct: 121 FKVEIMDYHPGDVAGIDSATLMITGHNAYGYLRSERGVHRFVRISPFDSAGRRHTSFVSI 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDS++++I+ +D ++D YRASGAGGQH+N T SAVR+THIPTG+VV  QQ+RSQ
Sbjct: 181 DVMPELDDSVDVDINPADVKMDVYRASGAGGQHINKTSSAVRLTHIPTGIVVASQQQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK  A+ MLRAKLY+LE+ K+E+        + E GWG QIRSYV QPY+MVKD RTN
Sbjct: 241 FQNKDTAYAMLRAKLYQLEMDKKEKERASIAGEQLENGWGSQIRSYVFQPYRMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +P  V+DGDLD F+ A L  K
Sbjct: 301 YESGNPQGVMDGDLDPFINAYLRWK 325


>gi|307702035|ref|ZP_07639043.1| peptide chain release factor 2 [Streptococcus mitis NCTC 12261]
 gi|307616680|gb|EFN95869.1| peptide chain release factor 2 [Streptococcus mitis NCTC 12261]
          Length = 329

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 154/328 (46%), Positives = 210/328 (64%), Gaps = 2/328 (0%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             K  +P  W + I A+   +E   L N  +   ++++   +  ILL+     +D S+ +
Sbjct: 2   ENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDF--LAEDESVHE 59

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E  + L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+  
Sbjct: 60  ELVEQLSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGN 119

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF
Sbjct: 120 AKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSF 179

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG VVQ   +
Sbjct: 180 TSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVD 239

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           R+Q+ N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD 
Sbjct: 240 RTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDH 299

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           RTN E      V+DGDLD F+ A L  +
Sbjct: 300 RTNFEVAQVDKVMDGDLDGFIDAYLKWR 327


>gi|291542843|emb|CBL15953.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus
           bromii L2-63]
          Length = 372

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 161/350 (46%), Positives = 224/350 (64%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +++ L         +  +  L  K  +P  W +V +++ +++    L   +   + +
Sbjct: 14  LKPEIDDLSDALGMKGMLSEIQQLELKATEPGFWDDVEKSQKVLQRTGSLKGKVEAYEGL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +  D   L+ELA EE+D S+L+E    ++ +K  +E ++ ++LL+GE D N+A L  H
Sbjct: 74  VAKYEDTHALIELANEEEDESLLEEAESEVEAVKENLEKQRLQTLLTGEYDKNNAILTFH 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG+GGTE+QDWA ML RMYTRWAE   FK + ++  DG+EAG+KSA LL++G NAYG+LK
Sbjct: 134 AGSGGTEAQDWAEMLYRMYTRWAEAHGFKVKEVDYLDGDEAGLKSAVLLVEGENAYGYLK 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR+SP+DS  RRHTSFSS+ V P +    E+ I   D ++D YRASGAGGQ 
Sbjct: 194 SEAGVHRLVRVSPFDSAGRRHTSFSSLEVMPEIAKDTEVHIPPEDIKMDVYRASGAGGQK 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T SAVR+THIPTG+VV  Q ERSQ++N+  A NML +KL E++ ++  E     +  
Sbjct: 254 VNKTSSAVRLTHIPTGIVVASQVERSQYQNRDVAMNMLISKLVEIKEREHLEKIEDIKGV 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           + EI WG QIRSYV  PY MVKD RT  E  +   V+DGDLD F+ A L 
Sbjct: 314 QKEITWGSQIRSYVFMPYTMVKDHRTGFETGNIQAVMDGDLDGFINAYLK 363


>gi|306825598|ref|ZP_07458937.1| peptide chain release factor RF2 [Streptococcus sp. oral taxon 071
           str. 73H25AP]
 gi|304431959|gb|EFM34936.1| peptide chain release factor RF2 [Streptococcus sp. oral taxon 071
           str. 73H25AP]
          Length = 329

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 153/328 (46%), Positives = 211/328 (64%), Gaps = 2/328 (0%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             K  +P  W + I A+   +E   L N  +  +++++   +  ILL+     +D S+  
Sbjct: 2   ENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDF--LAEDESVHD 59

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E  + L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+  
Sbjct: 60  ELVEQLTELDKMMANYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGN 119

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF
Sbjct: 120 AKGFKVEVLDYQAGDEAGIKSVTLFFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSF 179

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG VVQ   +
Sbjct: 180 TSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVD 239

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           R+Q+ N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD 
Sbjct: 240 RTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDH 299

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           RT+ E +    V+DGDLD F+ A L  +
Sbjct: 300 RTSFEVSQVDKVMDGDLDGFIDAYLKWR 327


>gi|167039139|ref|YP_001662124.1| peptide chain release factor 2 [Thermoanaerobacter sp. X514]
 gi|166853379|gb|ABY91788.1| peptide chain release factor 2 [Thermoanaerobacter sp. X514]
          Length = 330

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 162/325 (49%), Positives = 221/325 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W ++ +++ L ++++ L   +     +  +  D   L+EL LEE D SI  E  
Sbjct: 1   MSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLSTLIELGLEEGDESITDEVD 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + +K ++E  + ++LL+G  D N+A L +HAG+GGTE+QDWA MLLRMYTRWA  + 
Sbjct: 61  KEYKELKKKLEDLKIKTLLNGLYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+ E L+   GEEAGIKS TL+IKGP AYG+LK E GVHRLVRISP+D+  RRHTSF+ +
Sbjct: 121 FEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ IE+EI   D +IDTYRASGAGGQ+VN T+SAVRITH+PTG+VV CQ ERSQ
Sbjct: 181 EVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A  ML+AKL +L +++++E     +    E  WG QIRSYV QPY +VKD RTN
Sbjct: 241 IQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DG++D F+ A L  K
Sbjct: 301 YEVGNVQAVMDGEIDGFINAYLKQK 325


>gi|15618982|ref|NP_224772.1| peptide chain release factor 2 [Chlamydophila pneumoniae CWL029]
 gi|7388054|sp|P56906|RF2_CHLPN RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 369

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 163/359 (45%), Positives = 227/359 (63%), Gaps = 9/359 (2%)

Query: 3   LSRQLNCLG--------GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN 54
           L ++L  L          LFD D   + L  L  ++ + + WQ+ + A  +  +   L  
Sbjct: 5   LDKRLEALRTEISLAARSLFDLDKKQKELQVLEEESSEENFWQDSVHAGKISEQIVSLRR 64

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
            I   +E++ ++      LE A   +D +I ++        + ++   + + LLSGEAD 
Sbjct: 65  QIQEYQELKSKIDAIEFFLEDADALEDPAICEDLEKEFLFCEKKLAVWETQRLLSGEADK 124

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
           N  +L ++AGAGGTES DW  ML RMY+RWA K ++  E ++  DGE  GIK  T+   G
Sbjct: 125 NSCFLTINAGAGGTESCDWVEMLFRMYSRWATKHQWALEVVDRLDGEVVGIKHVTVKFSG 184

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             AYG+ K E+GVHRLVRISP+DSN +RHTSF+S+ V+P +DD I+IEI  +D RIDT+R
Sbjct: 185 MYAYGYAKAERGVHRLVRISPFDSNGKRHTSFASVDVFPEIDDQIKIEIRPNDLRIDTFR 244

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +SGAGGQHVN T+SAVRITH+P+GVVV CQ ERSQ +N+     ML+AKLY+  LQ+R E
Sbjct: 245 SSGAGGQHVNVTESAVRITHLPSGVVVSCQNERSQIQNRESCMKMLQAKLYQQVLQERLE 304

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
             ++    K EI WG QIR+YV QPY +VKD+RT  E  +   +LDG+ LD+F+KA LA
Sbjct: 305 KQSLDRKDKKEIAWGSQIRNYVFQPYTLVKDVRTGHETGNVQAMLDGELLDEFIKAYLA 363


>gi|288817909|ref|YP_003432256.1| peptide chain release factor RF-2 [Hydrogenobacter thermophilus
           TK-6]
 gi|288787308|dbj|BAI69055.1| peptide chain release factor RF-2 [Hydrogenobacter thermophilus
           TK-6]
 gi|308751508|gb|ADO44991.1| peptide chain release factor 2 [Hydrogenobacter thermophilus TK-6]
          Length = 369

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 173/341 (50%), Positives = 236/341 (69%), Gaps = 1/341 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D  +  + L  ++      + W++  +AK + + R+ L+  I   + I+  L   L  L
Sbjct: 23  MDISSMKEELKKIDMSMSSTNFWEDQGKAKEITQRRKWLEETIKEFERIKSTLE-TLQEL 81

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
              ++E+D   L   ++ +Q ++  +   + ++ LS E D N+AYL V AGAGGTE+ DW
Sbjct: 82  LEEVDEEDLETLSMIAEEIQSVEKPIRDLEIKTFLSEEMDKNNAYLTVQAGAGGTEACDW 141

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A+MLLRMY RWAEK  ++ E ++I+  + AGIKSATLLIKGP AYG+LKGE GVHRLVRI
Sbjct: 142 ASMLLRMYRRWAEKHGYEVEVIDINPDDVAGIKSATLLIKGPYAYGYLKGESGVHRLVRI 201

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+D+N+RRHTSF+S+ V P +D+ I IEI E D +++T+RASGAGGQ+VN TD+AVRI 
Sbjct: 202 SPFDANARRHTSFASVSVVPQIDEKINIEIREEDIQMETFRASGAGGQYVNKTDTAVRIR 261

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+ V CQQERSQ +N+ +A  +L+AKLY+LELQK EE     E  KT+IGWG QIR
Sbjct: 262 HIPTGITVSCQQERSQFQNRLKALELLKAKLYQLELQKLEEKKKALEGEKTDIGWGYQIR 321

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           SYV QPYQMVKDLRT +E  +   V+DGD+D F++  L  K
Sbjct: 322 SYVFQPYQMVKDLRTGLEVGNVDAVMDGDIDSFIEEYLRWK 362


>gi|268611479|ref|ZP_06145206.1| hypothetical protein RflaF_18501 [Ruminococcus flavefaciens FD-1]
          Length = 372

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 157/349 (44%), Positives = 235/349 (67%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
            +++  L  + + +NA +R++ L  +T     W ++  ++ +++E++ L+  I    ++ 
Sbjct: 15  RKEMEELADVLNIENAKKRVAELGDETAKEGFWDDLENSQKVLKEQKSLERKIEKFNKLN 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           D L D + L+EL++E +D S ++E     +  K ++E ++  +LL+GE D  +A L  HA
Sbjct: 75  DSLEDLITLIELSIEAEDESDIEEIKAEAESFKSKLEDEKLSTLLTGEYDGANAILTFHA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDWA ML RMY RWAE+ +FK E L+  DG+EAG+KSA++LI+G NAYG++K 
Sbjct: 135 GAGGTEAQDWAEMLYRMYNRWAERHEFKVELLDYLDGDEAGMKSASILIEGENAYGYMKS 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SP+D+  RRHTSF+++ V P +DDSIE++I   D  ++ YR+SGAGGQ V
Sbjct: 195 ESGVHRLVRVSPFDAQGRRHTSFAALEVMPELDDSIEVDIRPEDIEMEVYRSSGAGGQKV 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVR+ H PTG+VV CQ +RSQ++NK  A  MLR+KL E++ ++  E     +  +
Sbjct: 255 NKTSSAVRLIHKPTGIVVSCQTQRSQYQNKDYAMKMLRSKLIEIKEREHLEKIEDIKGVQ 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +I WG QIRSYV  PY +VKD RT  E  +   V+DGD+D F+ A L 
Sbjct: 315 NQIAWGSQIRSYVFMPYTLVKDTRTGFENGNIQAVMDGDIDGFINAYLK 363


>gi|21221417|ref|NP_627196.1| peptide chain release factor 2 [Streptomyces coelicolor A3(2)]
 gi|256787399|ref|ZP_05525830.1| peptide chain release factor 2 [Streptomyces lividans TK24]
 gi|289771299|ref|ZP_06530677.1| peptide chain release factor 2 [Streptomyces lividans TK24]
 gi|19864260|sp|Q53915|RF2_STRCO RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|6912002|emb|CAB72218.1| chain release factor 2 [Streptomyces coelicolor A3(2)]
 gi|289701498|gb|EFD68927.1| peptide chain release factor 2 [Streptomyces lividans TK24]
          Length = 368

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 154/353 (43%), Positives = 216/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDRLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD     E    L  ++  ++  +  +LLSGE D+ +A + + 
Sbjct: 73  RGRIDDLGVLFEMAEEEDDPDTRAEAESELAAVRKALDEMEVRTLLSGEYDAREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTEVYETSYAEEAGIKSTTFAVQSPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + + PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   +  +  
Sbjct: 253 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRK 364


>gi|29831645|ref|NP_826279.1| peptide chain release factor 2 [Streptomyces avermitilis MA-4680]
 gi|81717933|sp|Q82D82|RF2_STRAW RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|29608761|dbj|BAC72814.1| putative peptide chain release factor 2 [Streptomyces avermitilis
           MA-4680]
          Length = 368

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 154/353 (43%), Positives = 217/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD     E    L  +K  ++  +  +LLSGE DS +A + + 
Sbjct: 73  RGRIDDLSVLFEMAEEEDDPDTRAEAESELTAVKKALDEMEVRTLLSGEYDSREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+R +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQRGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + + PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVETTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL +   Q+ +   +  +  
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLDRRRQEEQAKMDALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  V +G+++ F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPEAVFNGEIEGFLEAGIRWRK 364


>gi|317133128|ref|YP_004092442.1| peptide chain release factor 2 [Ethanoligenens harbinense YUAN-3]
 gi|315471107|gb|ADU27711.1| peptide chain release factor 2 [Ethanoligenens harbinense YUAN-3]
          Length = 377

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 161/351 (45%), Positives = 238/351 (67%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +++ LG     D A   +  L  K      W ++  ++ ++++ + L + I+  + +
Sbjct: 17  MRPEIDDLGRALGLDAARAEVRELEEKAAQQDFWNDIENSQSVLQKTRQLKDKIASYEAL 76

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + +  D L L+ELA EE+D S+L E ++ +  ++ +++  +  +LL+GE D+ +A L  H
Sbjct: 77  RRKTDDTLALIELADEEEDLSVLAEAAEAVDSVRAQIDTMRLATLLTGEYDAKNAILTFH 136

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA ML RMYTRWAE+  F  + L+  DGEEAG+KSA++LI+G NAYG+LK
Sbjct: 137 AGAGGTEAQDWAEMLYRMYTRWAERHGFNVQVLDYLDGEEAGLKSASVLIEGLNAYGYLK 196

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR+SP+DS+ RRHTSF+S+ V P +DDSIE++I   D ++D +R+SGAGGQH
Sbjct: 197 SEIGVHRLVRVSPFDSSGRRHTSFASVEVMPEIDDSIEVDIRPEDIKMDVFRSSGAGGQH 256

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T SAVR+TH+PTG+VV CQ ERSQH+N+  A  ML++KL E++ ++  +     +  
Sbjct: 257 INKTSSAVRLTHLPTGIVVSCQNERSQHQNREMAMRMLKSKLVEIKEREHYDKIEDIKGV 316

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           + EI WG QIRSYV  PY +VKD RT+ E  +   V+DGDLD F+ A L  
Sbjct: 317 QKEIAWGSQIRSYVFMPYTLVKDHRTSFESGNIGAVMDGDLDGFINAYLKA 367


>gi|283769449|ref|ZP_06342347.1| peptide chain release factor 2 [Bulleidia extructa W1219]
 gi|283103974|gb|EFC05359.1| peptide chain release factor 2 [Bulleidia extructa W1219]
          Length = 346

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 140/341 (41%), Positives = 208/341 (60%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
           FD D   Q +   N        W +  +A+ +++E   L + +    ++ +   D L  +
Sbjct: 5   FDLDQKKQEIQKNNDLMAQEDFWNDQKKAQKIIKENNSLKDLVDQHTKLYETTLDLLASV 64

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
                  D  + +   +   +   +    +   LLSG  D ++A LE+H GAGGTE+ DW
Sbjct: 65  TELQSSLDEDMKELVEEEYVQYDQDYALFEVRVLLSGPYDDHNAILEIHPGAGGTEAMDW 124

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A ML RMYTR+AE++ +  + L+   GEEAG+KS ++ + G  AYG+LK E GVHRLVRI
Sbjct: 125 AGMLYRMYTRFAERKGYHLDVLDYQPGEEAGVKSVSMRVSGNMAYGYLKAENGVHRLVRI 184

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DSN+RRHTSF+S+ + P  +D +EIEI + D  + T R+SGAGGQH+N TDSAVR+T
Sbjct: 185 SPFDSNARRHTSFASVEIMPEFEDDLEIEIEDKDLDVITMRSSGAGGQHINKTDSAVRMT 244

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H PTG+ V  Q +RSQ +N+    NML++KL +L+++++E+ A+  +       WG QIR
Sbjct: 245 HKPTGITVFSQSQRSQLQNRETCLNMLKSKLLQLKIREQEQRASEIKGEVKANEWGSQIR 304

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           SYV  PY MVKDLRT  E  +   V+DGD++ F+ + L  +
Sbjct: 305 SYVFAPYTMVKDLRTGYEVGNVQSVMDGDIEGFIDSYLRSQ 345


>gi|52425597|ref|YP_088734.1| peptide chain release factor 2 [Mannheimia succiniciproducens
           MBEL55E]
 gi|52307649|gb|AAU38149.1| PrfB protein [Mannheimia succiniciproducens MBEL55E]
          Length = 325

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 171/324 (52%), Positives = 229/324 (70%), Gaps = 1/324 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P +W    +A+ L +ER  L+  ++ IK++   L D   LLELA+E +D     E  
Sbjct: 1   MEQPDVWNEPEKAQALGKERSALETVVNTIKKLDQGLEDVDGLLELAVEGEDEETFNEAV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L  ++ ++   +F  + SGE D+ D Y+++ AG+GGTE+QDW  MLLRMY RWAE + 
Sbjct: 61  TELDELEQQLAKLEFRRMFSGEHDACDCYIDLQAGSGGTEAQDWTEMLLRMYLRWAESKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FKTE +E+ DG+ AG+KSAT+ + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ 
Sbjct: 121 FKTELMEVSDGDVAGLKSATVKVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAA 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           ++YP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIP+G+VVQCQ +RSQ
Sbjct: 181 FIYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPSGIVVQCQNDRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           HKNK Q    L+AKLYE+ELQK+       E SK++IGWG QIRSYVL     +KDLRT 
Sbjct: 241 HKNKDQCMKQLKAKLYEMELQKKNADKQALEDSKSDIGWGSQIRSYVLDD-SRIKDLRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
           +E  +   VLDGDLD F++A+L  
Sbjct: 300 VENRNTQAVLDGDLDRFIEASLKA 323


>gi|258405989|ref|YP_003198731.1| hypothetical protein Dret_1869 [Desulfohalobium retbaense DSM 5692]
 gi|257798216|gb|ACV69153.1| hypothetical protein Dret_1869 [Desulfohalobium retbaense DSM 5692]
          Length = 371

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 161/351 (45%), Positives = 223/351 (63%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           ++L  +   L    D      RL  +  +   P  WQN  E   ++RE+  L   I   +
Sbjct: 12  LELQEKFESLWRRLDLQGHHDRLKTIEEELAKPEAWQNPEELTPILREKSRLTEEIESWE 71

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            ++D   D    LE+A E+    +LQ  S+    +  ++   + E LLS   D  +A LE
Sbjct: 72  ALRDLHEDLQEWLEMADEDQGQEVLQALSETNANLAAQLNKVEMELLLSKPEDKGNAILE 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +H GAGGTE+QDWA MLLRMY RW E+R FK + L+   GEEAGIKS TL I+G  AYG 
Sbjct: 132 IHPGAGGTEAQDWAEMLLRMYLRWCERRGFKVQELDSLPGEEAGIKSVTLQIQGTFAYGL 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E+G+HRL+RISP+D++ RRHTSF+S+ VYP   D IEI++++ D R+D +R+SG GG
Sbjct: 192 LQAEKGIHRLIRISPFDTSGRRHTSFASVDVYPEAADDIEIDVNDEDIRVDVFRSSGPGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN T SA+RITH P+G+VVQCQ E+SQ +NK  A  +L+++LY+ E +KRE       
Sbjct: 252 QNVNKTSSAIRITHFPSGIVVQCQNEKSQRRNKETAMKILKSRLYDQERKKREADKQAEY 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +SK  I WG QIR+Y LQPY++VKD RTN E      VLDGD+D F+++ L
Sbjct: 312 ASKEAIAWGSQIRTYTLQPYRLVKDHRTNTEAGDVDKVLDGDIDVFLRSYL 362


>gi|254497462|ref|ZP_05110255.1| peptide chain release factor 2 [Legionella drancourtii LLAP12]
 gi|254353277|gb|EET12019.1| peptide chain release factor 2 [Legionella drancourtii LLAP12]
          Length = 335

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 171/330 (51%), Positives = 226/330 (68%), Gaps = 1/330 (0%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             +  + E   +W N   A+ L RER  L+N +  +  +   + D   L ELA EE+D  
Sbjct: 2   EEVVRELESSTVWNNPEVAQALGRERTQLENVVFTLSGLSQSIIDLTELFELAREENDEQ 61

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
            + E    L+ I+ +V   +F  + SG  D  +AYL++ +G+GGTE+QDWA MLLRMY R
Sbjct: 62  AINEIGAELETIEQKVADLEFRRMFSGRMDGCNAYLDIQSGSGGTEAQDWAEMLLRMYLR 121

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           W E+  F TE +E   G+ AGIKSAT+  +G  A+GWL+ E GVHRLVR SP+DS +RRH
Sbjct: 122 WGEQHGFTTELIECSPGDVAGIKSATIYFQGEYAFGWLRTETGVHRLVRKSPFDSGNRRH 181

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSF+++++ P +DD IEIEI+ +D RIDTYRASGAGGQHVN TDSAVRITH P+G+VVQC
Sbjct: 182 TSFAAVFISPEIDDDIEIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHAPSGIVVQC 241

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           Q +RSQH+NK QA   LRAKLYELE+QK+       E+SK++IGWG QIRSYVL     +
Sbjct: 242 QNDRSQHRNKDQAMKQLRAKLYELEMQKKNAEQQALEASKSDIGWGSQIRSYVLD-QSRI 300

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KDLRT +E ++   VLDG LD F++A+L  
Sbjct: 301 KDLRTGVETSNTQAVLDGALDQFIEASLKA 330


>gi|332290838|ref|YP_004429447.1| hypothetical protein Krodi_0191 [Krokinobacter diaphorus 4H-3-7-5]
 gi|332168924|gb|AEE18179.1| hypothetical protein Krodi_0191 [Krokinobacter diaphorus 4H-3-7-5]
          Length = 368

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 158/351 (45%), Positives = 226/351 (64%), Gaps = 2/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +++ L    D D     +     KT DP+ W +  EA+  M+  +     ++  +E 
Sbjct: 10  LQERVDGLRRYLDVDRKRIEIQNEEEKTFDPNFWNDPKEAEAFMKTLRSKKKWVTDYEEA 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           Q  + D  +L E A E +      +   +       +E  +F ++LS E D     L++ 
Sbjct: 70  QTFVEDLEVLYEFAKEGEAPEENVQDRYDKAA--AFIEDIEFRNMLSEEGDELSCVLQIT 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA ML+RMY  +AEK+ +K + L   +G+ AGIK+ +L I+G  A+GWLK
Sbjct: 128 AGAGGTESCDWAAMLMRMYLMYAEKQGWKVKELNFQEGDVAGIKTVSLEIEGDFAFGWLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDSIEIEI+ +D  I T R+SGAGGQ+
Sbjct: 188 GENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIEINPADYDIVTARSSGAGGQN 247

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++ V++TH PTG+ + C   RSQH N+A+A  MLR++LYELEL+K+ E  N  E+ 
Sbjct: 248 VNKVETKVQLTHHPTGIQISCSDSRSQHDNRAKALQMLRSQLYELELRKQMEARNAIEAD 307

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K  I WG QIR+YVL PY++VKD+RT +E  +   VLDG++D F+K  L +
Sbjct: 308 KKAIEWGSQIRNYVLHPYKLVKDVRTAVETGNTDAVLDGNIDLFLKGYLMM 358


>gi|221195492|ref|ZP_03568547.1| peptide chain release factor 2 [Atopobium rimae ATCC 49626]
 gi|221184679|gb|EEE17071.1| peptide chain release factor 2 [Atopobium rimae ATCC 49626]
          Length = 371

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 156/353 (44%), Positives = 204/353 (57%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +L+ +      D   + ++ L   +     W +   A+  M     L + ++ I   
Sbjct: 12  LTARLDEVESYLHIDEKREEIASLTQISAKADFWNDADFARQTMARLASLKDDVAGIDAA 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +L D    LEL  E +D  +L E+      +  ++   +  S  + E D  DA + V 
Sbjct: 72  HAKLEDAKAALELGSETEDAGLLAESEHLADSLARDLSELELSSWFTDELDHGDAIVTVK 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            G GG E+QDWA+ML  MY R+A +R +  +  E    E  GI  AT  + G NAYG L+
Sbjct: 132 PGQGGLEAQDWADMLFHMYLRYAARRGWSVDIAEATPAEVIGIDRATFTVSGKNAYGMLR 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQGVHRLVRISP D   RR TSF+ + V PV+   IE++I  SD RID Y ASG GGQ 
Sbjct: 192 AEQGVHRLVRISPTDDKKRRQTSFAGVEVLPVLPAEIEVDIDPSDLRIDVYHASGPGGQG 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTGVVV CQ ERSQ +NKA A N+LR++LYE+E +KRE   +     
Sbjct: 252 VNTTDSAVRITHIPTGVVVTCQNERSQLQNKAAAMNILRSRLYEIEREKREAELDELRGP 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIK 354
           K EI +G QIRSYVL PYQ+VKDLRT  E  +   VL DGDLD F+ A    +
Sbjct: 312 KHEISFGNQIRSYVLYPYQLVKDLRTGEETGNVDAVLDDGDLDPFIIAYHRWR 364


>gi|325478551|gb|EGC81663.1| peptide chain release factor 2 [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 347

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 158/342 (46%), Positives = 220/342 (64%), Gaps = 2/342 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           LFD       +  L  K++ P  W +   A+  M +     + +    +++D + DN  +
Sbjct: 4   LFDPARLKDEIEKLEKKSQSPDFWNDSDAAQKTMADLALKKDDLEDYNKLKDGIADNTDM 63

Query: 73  LELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           L+L    +D  +       +   K     +  + ++ LSGE D N+AYL ++AGAGG E+
Sbjct: 64  LDLVELSEDSELKTIEEVEISLKKLDKLAQAMKLKTQLSGEYDKNNAYLSINAGAGGLEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA+ML RMYTR+ + R FK +  ++++ E  GIKS T+ +KG  AYG+LKGE+GVHRL
Sbjct: 124 TDWADMLFRMYTRYFDDRGFKYDIKDLNNEEAGGIKSVTIHVKGSYAYGYLKGEKGVHRL 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+DS SRRHTSFSS+ ++P +DD I+I+I  SD RIDTYRASGAGGQHVN TDSAV
Sbjct: 184 VRISPFDSQSRRHTSFSSVDIFPELDDDIQIDIDPSDLRIDTYRASGAGGQHVNKTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIPTGVV   Q ERSQ +N+  A N+L +KL +++ +++ E     +   ++I WG 
Sbjct: 244 RITHIPTGVVATSQAERSQIQNRQTAMNLLMSKLVQIKEEEQREKIEDIQGKYSQIAWGS 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYV QPY MVKD RTN E  +   V+DG++  F+ A LA
Sbjct: 304 QIRSYVFQPYTMVKDHRTNFEMGNVESVMDGNIQGFIDAYLA 345


>gi|320547182|ref|ZP_08041476.1| peptide chain release factor RF2 [Streptococcus equinus ATCC 9812]
 gi|320448169|gb|EFW88918.1| peptide chain release factor RF2 [Streptococcus equinus ATCC 9812]
          Length = 336

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 152/336 (45%), Positives = 208/336 (61%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L  K  +P  W + I A+   +E   L        E+Q+   +  + LE+  E
Sbjct: 1   MEEDIALLENKMTEPDFWNDNIAAQKTSQELNSLKQTYETFNEMQELSDETELYLEMLDE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +D      E +         +   +   LLS   D N+A LE+H G+GGTE+QDWA+ML 
Sbjct: 61  DDSIQSELEETLEKLD--KIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADMLF 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTR+   + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS
Sbjct: 119 RMYTRYGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSFSS+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG
Sbjct: 179 AKRRHTSFSSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  
Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RT  E      V+DGD+D F+ A L  +
Sbjct: 299 PYTMVKDHRTGYEVAQVDKVMDGDIDGFIDAFLKWR 334


>gi|315641246|ref|ZP_07896323.1| peptide chain release factor RF2 [Enterococcus italicus DSM 15952]
 gi|315483013|gb|EFU73532.1| peptide chain release factor RF2 [Enterococcus italicus DSM 15952]
          Length = 340

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 172/336 (51%), Positives = 225/336 (66%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++    +  +P  W +   A+ ++ E      A     E+ D L +  +LLE+  E
Sbjct: 1   MEEDIAEAENRMAEPGFWDDTQSAQKVINENNSNKEAFDQFHELADELEELEVLLEMIQE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D  + QE +     +  ++   +   LL G  D N+A +E+H GAGGTESQDW +MLL
Sbjct: 61  EPDDEMEQELATRASELLGKMSAYELAMLLDGPYDHNNAIIELHPGAGGTESQDWGSMLL 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RWA+KR F+ E L+   G+EAGIKS TLLIKG NA+G+LK E+GVHRLVRISP+DS
Sbjct: 121 RMYQRWADKRGFQVETLDYLPGDEAGIKSVTLLIKGRNAFGYLKSEKGVHRLVRISPFDS 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
            +RRHTSF S+ V P +DD+I+IEI+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG
Sbjct: 181 ANRRHTSFCSVDVMPELDDTIDIEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPTG 240

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
            VV  Q +RSQ KN+ QA  ML+AKLY+LE++K+E+ A      + EIGWG QIRSYV  
Sbjct: 241 TVVASQAQRSQLKNREQAMGMLKAKLYQLEVEKQEQEAAALRGEQMEIGWGSQIRSYVFH 300

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN E  +   V+DGD+D F+ A L  K
Sbjct: 301 PYSMVKDHRTNFETGNVQAVMDGDIDGFIDAYLKQK 336


>gi|302560365|ref|ZP_07312707.1| peptide chain release factor 2 [Streptomyces griseoflavus Tu4000]
 gi|302477983|gb|EFL41076.1| peptide chain release factor 2 [Streptomyces griseoflavus Tu4000]
          Length = 368

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 157/353 (44%), Positives = 218/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW N  EA+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPEEAQKITSKLSHLQAEVRKAEGL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD     E    L  +K  ++  +  +LLSGE DS +A + + 
Sbjct: 73  RGRIDDLAVLFEMAEEEDDPDTRAEAESELTLVKKALDEMEVRTLLSGEYDSREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE +E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTELIETSYAEEAGIKSTTFSVQAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + + PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   +  +  
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWRK 364


>gi|291547275|emb|CBL20383.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus sp.
           SR1/5]
          Length = 332

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 159/324 (49%), Positives = 217/324 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P  W N   ++M M++ + L + I     ++ ++ D   ++E+  EE+D  I+ E  
Sbjct: 1   MEAPDFWDNAEASQMKMKQLKSLKDDIETYHNLETQMEDMETMIEMGYEENDPEIVPEIQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L   +   +  + ++LLSGE D  +A ++++AGAGGTE+ DW  ML RMY+RWAEK+ 
Sbjct: 61  EMLDEFQASFDSIRVKTLLSGEYDGENAIIKLNAGAGGTEACDWCGMLYRMYSRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L+  DG+EAG+KS T  + G NAYG+LK E+GVHRLVRISP+++  +R TSF S 
Sbjct: 121 FALEVLDYLDGDEAGVKSVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +   +++EI++ D RIDTYR+SGAGGQH+N T SA+RITH PTG+VVQCQ ERSQ
Sbjct: 181 DVMPDIKKDLDVEINDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK +A  ML+AKLY L+ Q+ EE  +      T+IGWG QIRSYVLQPY MVKD RTN
Sbjct: 241 HMNKDKAMQMLKAKLYLLKQQEAEEKLSGIRGEVTDIGWGNQIRSYVLQPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  +   VLDG +D F+ A L  
Sbjct: 301 EETGNVDAVLDGGIDIFINAYLKW 324


>gi|309809397|ref|ZP_07703259.1| peptide chain release factor 2 [Lactobacillus iners SPIN 2503V10-D]
 gi|312870788|ref|ZP_07730894.1| peptide chain release factor 2 [Lactobacillus iners LEAF 3008A-a]
 gi|312873174|ref|ZP_07733233.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2062A-h1]
 gi|315653886|ref|ZP_07906802.1| peptide chain release factor RF2 [Lactobacillus iners ATCC 55195]
 gi|308170308|gb|EFO72339.1| peptide chain release factor 2 [Lactobacillus iners SPIN 2503V10-D]
 gi|311091407|gb|EFQ49792.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2062A-h1]
 gi|311093664|gb|EFQ52002.1| peptide chain release factor 2 [Lactobacillus iners LEAF 3008A-a]
 gi|315488582|gb|EFU78228.1| peptide chain release factor RF2 [Lactobacillus iners ATCC 55195]
          Length = 359

 Score =  260 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 154/351 (43%), Positives = 220/351 (62%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +    + LGGLFD+DN  + ++    K  D   W +   A+ ++    ++   +   + +
Sbjct: 1   MKNNCHILGGLFDFDNLKESIAINEQKMADDTFWNDQTNAQKIIEATNYMREKVDKYQTL 60

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D    +EL   E +  +L E +  ++++K E    +   LLSG+ D ++A LE+H
Sbjct: 61  SSALADAKTAVELYNMEPENDMLMEITAEVEKLKNEFNDYELHLLLSGKYDDHNALLEIH 120

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTE+ DWANML RMY RW +      E  +   G+EAG+KS ++ ++G NA+G LK
Sbjct: 121 SGAGGTEAMDWANMLFRMYQRWCDSHNLTFEVDDFQVGDEAGLKSVSVRVQGNNAFGLLK 180

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DS  RRHTSF+S+ V P +D SI IEI+  D RID YR+SGAGGQH
Sbjct: 181 SENGVHRLVRISPFDSAKRRHTSFASVEVIPEIDKSINIEINPDDLRIDVYRSSGAGGQH 240

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T SAVRITH+PTG+V   Q +RSQ +N+  A +MLRAKL++LE  K+ +     + +
Sbjct: 241 INKTSSAVRITHLPTGIVTSSQAQRSQFQNRETAMDMLRAKLFKLEEDKKRKQTEALKGN 300

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           + EI +G QIRSYV  PY MVKD RT+ E +    V++G+LD F+ A L  
Sbjct: 301 QKEINFGSQIRSYVFHPYNMVKDHRTDYETSDTIGVMNGNLDPFIYAYLQW 351


>gi|13470493|ref|NP_102062.1| peptide chain release factor 2 [Mesorhizobium loti MAFF303099]
 gi|14021235|dbj|BAB47848.1| translation releasing factor RF-2 [Mesorhizobium loti MAFF303099]
          Length = 340

 Score =  260 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 224/326 (68%), Positives = 273/326 (83%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  LW   +EA+ LMRERQ L+  I+ +K +   L DN+ L+EL  EE D  ++ E 
Sbjct: 2   RAEDASLWNEPLEAQKLMRERQGLEEGIAAVKGLTQALEDNIGLIELGEEEGDEGVITEA 61

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              ++ ++ E + +Q E+LLSGEAD+ND YLE+HAGAGGTESQDWA+MLLRMYTRWAE+R
Sbjct: 62  EAAIRSMQGEAKARQVETLLSGEADANDTYLEIHAGAGGTESQDWASMLLRMYTRWAERR 121

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
           +FK E LE+HDGEEAGIKSATL+IKG NAYGWLK E GVHRLVRISPYDSN+RRHTSF+S
Sbjct: 122 RFKVEVLEVHDGEEAGIKSATLMIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFAS 181

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +WVYPV+DD+IEI++SESD RIDTYR+SG+GGQHVNTTDSAVRITHI TG+ V CQ ERS
Sbjct: 182 VWVYPVIDDTIEIDVSESDVRIDTYRSSGSGGQHVNTTDSAVRITHIATGIAVACQAERS 241

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QHKN+A+AW MLR++LYE EL+KRE IAN  E+SK++IGWG QIRSYVLQPYQ+VKDLRT
Sbjct: 242 QHKNRAKAWEMLRSRLYEEELKKREAIANATEASKSDIGWGHQIRSYVLQPYQLVKDLRT 301

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
            +E TSPS VLDGDLDDFM+A+L+ +
Sbjct: 302 GVESTSPSSVLDGDLDDFMEASLSQR 327


>gi|320010490|gb|ADW05340.1| peptide chain release factor 2 [Streptomyces flavogriseus ATCC
           33331]
          Length = 368

 Score =  260 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 154/353 (43%), Positives = 217/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMGSIEAVLDLDALRVDIAALEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTETL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA +E D   L E    L+ ++  ++  +  +LLSGE D+ +A + + 
Sbjct: 73  RGRIDDLEVLFELAEDEGDADALAEAESELESVRKALDEMEVRTLLSGEYDAREALVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAERHNYKTEVYETAYAEEAGIKSTTFAVEVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  +EI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHVEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   N  +  
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMNALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEFEMGNPEAVFNGEIDGFVEAGIRWRK 364


>gi|309803856|ref|ZP_07697941.1| peptide chain release factor 2 [Lactobacillus iners LactinV 11V1-d]
 gi|325913296|ref|ZP_08175664.1| peptide chain release factor 2 [Lactobacillus iners UPII 60-B]
 gi|329920534|ref|ZP_08277266.1| peptide chain release factor 2 [Lactobacillus iners SPIN 1401G]
 gi|308164090|gb|EFO66352.1| peptide chain release factor 2 [Lactobacillus iners LactinV 11V1-d]
 gi|325477399|gb|EGC80543.1| peptide chain release factor 2 [Lactobacillus iners UPII 60-B]
 gi|328936210|gb|EGG32663.1| peptide chain release factor 2 [Lactobacillus iners SPIN 1401G]
          Length = 359

 Score =  260 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 154/351 (43%), Positives = 220/351 (62%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +    + LGGLFD+DN  + ++    K  D   W +   A+ ++    ++   +   + +
Sbjct: 1   MKNNYHILGGLFDFDNLKESIAINEQKMADDTFWNDQTNAQKIIEATNYMREKVDKYQTL 60

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D    +EL   E +  +L E +  ++++K E    +   LLSG+ D ++A LE+H
Sbjct: 61  SSALADAKTAVELYNMEPENDMLMEITAEVEKLKNEFNNYELHLLLSGKYDDHNALLEIH 120

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTE+ DWANML RMY RW +      E  +   G+EAG+KS ++ ++G NA+G LK
Sbjct: 121 SGAGGTEAMDWANMLFRMYQRWCDSHNLTFEVDDFQVGDEAGLKSVSVRVQGNNAFGLLK 180

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DS  RRHTSF+S+ V P +D SI IEI+  D RID YR+SGAGGQH
Sbjct: 181 SENGVHRLVRISPFDSAKRRHTSFASVEVIPEIDKSINIEINPDDLRIDVYRSSGAGGQH 240

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T SAVRITH+PTG+V   Q +RSQ +N+  A +MLRAKL++LE  K+ +     + +
Sbjct: 241 INKTSSAVRITHLPTGIVTSSQAQRSQFQNRETAMDMLRAKLFKLEEDKKRKQTEALKGN 300

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           + EI +G QIRSYV  PY MVKD RT+ E +    V++G+LD F+ A L  
Sbjct: 301 QKEINFGSQIRSYVFHPYNMVKDHRTDYETSDTIGVMNGNLDPFIYAYLQW 351


>gi|315634626|ref|ZP_07889910.1| peptide chain release factor RF2 [Aggregatibacter segnis ATCC
           33393]
 gi|315476574|gb|EFU67322.1| peptide chain release factor RF2 [Aggregatibacter segnis ATCC
           33393]
          Length = 325

 Score =  260 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 173/324 (53%), Positives = 230/324 (70%), Gaps = 1/324 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P +W +  +A+ L +ER  L+  ++ IK ++  L D   LLELA+E  D     E  
Sbjct: 1   MEQPDVWNDADKAQALGKERVSLEQVVNTIKNLEQGLEDVDGLLELAVEAGDEDTFNEAV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L  ++ ++   +F  + SGE D+ D Y+++ AG+GGTE+QDW  MLLRMY RWAE + 
Sbjct: 61  AELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FKTE +E+ DG+ AG+KSAT+ + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ 
Sbjct: 121 FKTELMEVSDGDVAGVKSATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAA 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITH+P+G+VVQCQ +RSQ
Sbjct: 181 FVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           HKNK QA   L+AKLYELELQK+       E +K++IGWG QIRSYVL     +KDLRT 
Sbjct: 241 HKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
           +E  +   VLDGDLD F++A+L  
Sbjct: 300 VENRNTQAVLDGDLDRFIEASLKA 323


>gi|163816074|ref|ZP_02207444.1| hypothetical protein COPEUT_02254 [Coprococcus eutactus ATCC 27759]
 gi|158448884|gb|EDP25879.1| hypothetical protein COPEUT_02254 [Coprococcus eutactus ATCC 27759]
          Length = 370

 Score =  260 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 169/350 (48%), Positives = 229/350 (65%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
              L  +    D +N   R++ LN + E P  W +V  ++ + RE ++L + +   K+++
Sbjct: 15  KEPLEEVKSSLDIENKTDRIAKLNYEMEQPSFWDDVDRSREVSRELKNLQDLVDNYKKLE 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           +   D   L+ +A EE+D S++ E  + +   K E E  +   L + E D  +A L +H+
Sbjct: 75  NDYLDIDTLILMAEEENDSSLIPEIGEQIDIFKKEFEEYRINLLFTDEFDDCNAVLTLHS 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G GGTES DWA+ML RMYTRWAEK     E L+  +G+EAGIKS T+ I GP+AYG+LK 
Sbjct: 135 GEGGTESCDWASMLYRMYTRWAEKHGMSVEVLDFLEGDEAGIKSVTIQINGPHAYGYLKS 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP++S  +R TSF+S  V P ++  +EIEI + D RIDTYR+SGAGGQH+
Sbjct: 195 EKGVHRLVRISPFNSAGKRMTSFASCDVIPDIEQDLEIEIRDEDIRIDTYRSSGAGGQHI 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SA+RITH PTG+VVQCQ ERSQ  NK +A  ML++KLY L+ Q+  E  +      
Sbjct: 255 NKTSSAIRITHFPTGIVVQCQNERSQLMNKNKAMQMLKSKLYLLKKQENLERISDIRGEV 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           T+ G+G QIRSYVLQPY MVKD RT+ E ++ S VLDGDLD FM A L  
Sbjct: 315 TDNGFGSQIRSYVLQPYTMVKDKRTSYENSNVSAVLDGDLDGFMTAYLKW 364


>gi|270157123|ref|ZP_06185780.1| peptide chain release factor 2 [Legionella longbeachae D-4968]
 gi|289164472|ref|YP_003454610.1| peptide chain release factor 2 [Legionella longbeachae NSW150]
 gi|269989148|gb|EEZ95402.1| peptide chain release factor 2 [Legionella longbeachae D-4968]
 gi|288857645|emb|CBJ11485.1| putative peptide chain release factor 2 [Legionella longbeachae
           NSW150]
          Length = 336

 Score =  260 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 170/330 (51%), Positives = 230/330 (69%), Gaps = 1/330 (0%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             +  + E   +W N   A+ L RE+  L+  +S + ++   + D   L E+A EE D  
Sbjct: 2   EEVVRELESSTIWDNPEVAQALGREQTQLEALVSTLTQLGQSITDLNELFEMAREESDEQ 61

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
            + E S+ LQ ++ +V   +F  + SG+ D ++AYL++ +G+GGTE+QDWA MLLRMY R
Sbjct: 62  TINEISEELQTVEKKVADLEFRRMFSGKMDDSNAYLDIQSGSGGTEAQDWAEMLLRMYLR 121

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           W E+  F TE +E   G+ AGIKSAT+  +G  A+GWL+ E GVHRLVR SP+DS +RRH
Sbjct: 122 WGEQHGFTTELIECSPGDVAGIKSATIYFQGEYAFGWLRTETGVHRLVRKSPFDSGNRRH 181

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSF++++V P +DD I+IEI+ +D RIDTYRASGAGGQHVN TDSAVRITH P+G+VVQC
Sbjct: 182 TSFAAVFVSPEIDDDIDIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHAPSGIVVQC 241

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           Q +RSQH+NK QA   LRAKLYELE+QK+       E+SK++IGWG QIRSYVL     +
Sbjct: 242 QTDRSQHRNKDQAMKQLRAKLYELEMQKKNAEQQALEASKSDIGWGSQIRSYVLD-QSRI 300

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KDLRT +E ++   VLDG LD F++A+L  
Sbjct: 301 KDLRTGVETSNTQAVLDGALDQFIEASLKA 330


>gi|1402638|dbj|BAA13170.1| PrfB [Streptomyces coelicolor]
          Length = 368

 Score =  260 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 216/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDRLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD     E    L  ++  ++  +  +LLSGE D+ +A + + 
Sbjct: 73  RGRIDDLGVLFEMAEEEDDPDTRAEAESELAAVRKALDEMEVRTLLSGEYDAREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTEVYETSYAEEAGIKSTTFAVQSPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + + PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   +  +  
Sbjct: 253 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG ++RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 313 GGN-SWGNRVRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRK 364


>gi|319939454|ref|ZP_08013814.1| peptide chain release factor 2 [Streptococcus anginosus 1_2_62CV]
 gi|319811440|gb|EFW07735.1| peptide chain release factor 2 [Streptococcus anginosus 1_2_62CV]
          Length = 325

 Score =  260 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 146/325 (44%), Positives = 203/325 (62%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + + A+   +E   L       +++ D   ++ ILL+   E+D      E  
Sbjct: 1   MTEPDFWDDNVAAQKTSQELNELKQTYDNFQQMTDLFDESEILLDFLAEDDSFQEELEEK 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
                 +  +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+     
Sbjct: 61  LAELETR--MTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAHG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEIE+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+V Q   +R+Q
Sbjct: 179 EVMPELDDTIEIEVRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  +L+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT 
Sbjct: 239 YGNRDRAMKLLQAKLYQMEQEKKAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTG 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|315658891|ref|ZP_07911758.1| peptide chain release factor RF2 [Staphylococcus lugdunensis
           M23590]
 gi|315496015|gb|EFU84343.1| peptide chain release factor RF2 [Staphylococcus lugdunensis
           M23590]
          Length = 334

 Score =  260 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 155/327 (47%), Positives = 214/327 (65%), Gaps = 1/327 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              +P+ W +  +A+ ++ +   L        ++ + + D     EL  EE D  +  E 
Sbjct: 1   MMTEPNFWDDQNKAQDIIDKNNALKAITMGYHDLDNEVEDMFATTELLQEEYDEDMKAEL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
             N+     +++  + + LL G  D+N+A LE+H GAGGTESQDWA+MLLRMY R+ E+ 
Sbjct: 61  EMNVLAFNDKLDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYCEQN 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E ++   G+EAGIKS TLL+KG NAYG+LK E+GVHRLVRISP+D++ RRHTSF+S
Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLLVKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFAS 180

Query: 209 IWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
             V P   ++ IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ER
Sbjct: 181 CDVIPDFNNNEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KN+  A  ML++KLY+L+L+++ +        + EIGWG QIRSYV  PY MVKD R
Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAQEMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354
           TN E      V+DGD+  F++A L  +
Sbjct: 301 TNEETGKVDAVMDGDIGPFIEAYLRQQ 327


>gi|333024883|ref|ZP_08452947.1| putative peptide chain release factor 2 [Streptomyces sp. Tu6071]
 gi|332744735|gb|EGJ75176.1| putative peptide chain release factor 2 [Streptomyces sp. Tu6071]
          Length = 373

 Score =  260 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 156/353 (44%), Positives = 217/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D   + ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 15  LSSTMESIEAVLDLDKMREDIASLEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEGL 74

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA +E D    +E    L  ++  ++  +  +LLSGE DS +A + + 
Sbjct: 75  RGRIDDLGVLFELAADEGDADTQEEAEQELAAVRKALDEMEVRTLLSGEYDSREAVVTIR 134

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  +  P AYG L 
Sbjct: 135 AEAGGVDASDFAERLQRMYLRWAERLGYKTELYETSYAEEAGIKSTTFAVHVPYAYGTLS 194

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 195 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 254

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +E  N  +  
Sbjct: 255 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQEKMNALKGD 314

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 315 GGN-SWGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRK 366


>gi|322374638|ref|ZP_08049152.1| peptide chain release factor 2 [Streptococcus sp. C300]
 gi|321280138|gb|EFX57177.1| peptide chain release factor 2 [Streptococcus sp. C300]
          Length = 329

 Score =  260 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 152/328 (46%), Positives = 209/328 (63%), Gaps = 2/328 (0%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             K  +P  W + I A+   +E   L N  +  +++++   +  ILL+     +D S+  
Sbjct: 2   ENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDF--LAEDESVHD 59

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E  + L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+  
Sbjct: 60  ELVEQLTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGN 119

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF
Sbjct: 120 AKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSF 179

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG VVQ   +
Sbjct: 180 TSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVD 239

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           R+Q+ N+ +A  ML+ KLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD 
Sbjct: 240 RTQYGNRDRAMKMLQTKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDH 299

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           RT+ E      V+DGDLD F+ A L  +
Sbjct: 300 RTSFEVAQVDKVMDGDLDGFIDAYLKWR 327


>gi|259501054|ref|ZP_05743956.1| peptide chain release factor RF2 [Lactobacillus iners DSM 13335]
 gi|309807259|ref|ZP_07701230.1| peptide chain release factor 2 [Lactobacillus iners LactinV 03V1-b]
 gi|309808840|ref|ZP_07702723.1| peptide chain release factor 2 [Lactobacillus iners LactinV 01V1-a]
 gi|312874339|ref|ZP_07734370.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2052A-d]
 gi|312875084|ref|ZP_07735101.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2053A-b]
 gi|325911468|ref|ZP_08173880.1| peptide chain release factor 2 [Lactobacillus iners UPII 143-D]
 gi|259167748|gb|EEW52243.1| peptide chain release factor RF2 [Lactobacillus iners DSM 13335]
 gi|308166350|gb|EFO68558.1| peptide chain release factor 2 [Lactobacillus iners LactinV 03V1-b]
 gi|308167916|gb|EFO70051.1| peptide chain release factor 2 [Lactobacillus iners LactinV 01V1-a]
 gi|311089374|gb|EFQ47801.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2053A-b]
 gi|311090105|gb|EFQ48518.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2052A-d]
 gi|325476818|gb|EGC79972.1| peptide chain release factor 2 [Lactobacillus iners UPII 143-D]
          Length = 359

 Score =  260 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 154/351 (43%), Positives = 220/351 (62%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +    + LGGLFD+DN  + ++    K  D   W +   A+ ++    ++   +   + +
Sbjct: 1   MKNNCHILGGLFDFDNLKESIAINEQKMADDTFWNDQTNAQKIIEATNYMREKVDKYQTL 60

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D    +EL   E +  +L E +  ++++K E    +   LLSG+ D ++A LE+H
Sbjct: 61  SSALADAKTAVELYNMEPENDMLMEITAEVEKLKNEFNNYELHLLLSGKYDDHNALLEIH 120

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTE+ DWANML RMY RW +      E  +   G+EAG+KS ++ ++G NA+G LK
Sbjct: 121 SGAGGTEAMDWANMLFRMYQRWCDSHNLTFEVDDFQVGDEAGLKSVSVRVQGNNAFGLLK 180

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DS  RRHTSF+S+ V P +D SI IEI+  D RID YR+SGAGGQH
Sbjct: 181 SENGVHRLVRISPFDSAKRRHTSFASVEVIPEIDKSINIEINPDDLRIDVYRSSGAGGQH 240

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T SAVRITH+PTG+V   Q +RSQ +N+  A +MLRAKL++LE  K+ +     + +
Sbjct: 241 INKTSSAVRITHLPTGIVTSSQAQRSQFQNRETAMDMLRAKLFKLEEDKKRKQTEALKGN 300

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           + EI +G QIRSYV  PY MVKD RT+ E +    V++G+LD F+ A L  
Sbjct: 301 QKEINFGSQIRSYVFHPYNMVKDHRTDYETSDTIGVMNGNLDPFIYAYLQW 351


>gi|81428109|ref|YP_395108.1| peptide chain release factor 2 [Lactobacillus sakei subsp. sakei
           23K]
 gi|78609750|emb|CAI54796.1| Peptide chain release factor 2 [Lactobacillus sakei subsp. sakei
           23K]
          Length = 332

 Score =  260 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 162/325 (49%), Positives = 213/325 (65%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +   A+ L+ +   L        ++Q +  +  + LEL  EE D  +     
Sbjct: 1   MGDPDFWNDQQSAQQLIDQNNVLKEKYDSFNQLQAQFEELSVTLELLQEEPDDELQASFE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L++I+ ++   +   LLSGE DSN+A +E+H GAGGTESQDW  MLLRMY RWA+   
Sbjct: 61  ADLEQIQSQMRQYELGQLLSGEYDSNNAIVELHPGAGGTESQDWGAMLLRMYLRWADAHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E  +   GEEAGIKS TL+IKG NAYG L+ E+GVHRLVRISP+DS  RRHTSF S+
Sbjct: 121 FTVETEDYQAGEEAGIKSVTLMIKGHNAYGLLRSEKGVHRLVRISPFDSAGRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D SI+IE+   D R+D +R+SGAGGQH+N T SAVR+TH+PTG+VV  Q +RSQ
Sbjct: 181 DVMPELDGSIDIEVRTEDLRVDVFRSSGAGGQHINKTSSAVRLTHLPTGIVVSSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A NML+AKLY+ E +++ + A   +  + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LQNRETAMNMLKAKLYQKEQEEQAKKAAAIKGEQLEIGWGSQIRSYVFHPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD FM A L  +
Sbjct: 301 YETGNGQAVMDGDLDPFMYAYLQWQ 325


>gi|169832431|ref|YP_001694217.1| peptide chain release factor 2 [Streptococcus pneumoniae
           Hungary19A-6]
 gi|172079637|ref|ZP_02709786.2| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC1873-00]
 gi|183603431|ref|ZP_02717047.2| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC3059-06]
 gi|183603478|ref|ZP_02714985.2| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC0288-04]
 gi|225854263|ref|YP_002735775.1| peptide chain release factor 2 [Streptococcus pneumoniae JJA]
 gi|237650402|ref|ZP_04524654.1| peptide chain release factor 2 [Streptococcus pneumoniae CCRI 1974]
 gi|237822484|ref|ZP_04598329.1| peptide chain release factor 2 [Streptococcus pneumoniae CCRI
           1974M2]
 gi|303260019|ref|ZP_07345993.1| peptide chain release factor 2 [Streptococcus pneumoniae SP-BS293]
 gi|303261425|ref|ZP_07347373.1| peptide chain release factor 2 [Streptococcus pneumoniae
           SP14-BS292]
 gi|303264092|ref|ZP_07350013.1| peptide chain release factor 2 [Streptococcus pneumoniae BS397]
 gi|303266295|ref|ZP_07352186.1| peptide chain release factor 2 [Streptococcus pneumoniae BS457]
 gi|303269536|ref|ZP_07355300.1| peptide chain release factor 2 [Streptococcus pneumoniae BS458]
 gi|307127694|ref|YP_003879725.1| peptide chain release factor 2 [Streptococcus pneumoniae 670-6B]
 gi|168994933|gb|ACA35545.1| peptide chain release factor 2 [Streptococcus pneumoniae
           Hungary19A-6]
 gi|172041988|gb|EDT50034.1| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC1873-00]
 gi|183574752|gb|EDT95280.1| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC0288-04]
 gi|183576822|gb|EDT97350.1| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC3059-06]
 gi|225722944|gb|ACO18797.1| peptide chain release factor 2 [Streptococcus pneumoniae JJA]
 gi|302637559|gb|EFL68046.1| peptide chain release factor 2 [Streptococcus pneumoniae
           SP14-BS292]
 gi|302638938|gb|EFL69399.1| peptide chain release factor 2 [Streptococcus pneumoniae SP-BS293]
 gi|302640921|gb|EFL71304.1| peptide chain release factor 2 [Streptococcus pneumoniae BS458]
 gi|302644225|gb|EFL74481.1| peptide chain release factor 2 [Streptococcus pneumoniae BS457]
 gi|302646497|gb|EFL76723.1| peptide chain release factor 2 [Streptococcus pneumoniae BS397]
 gi|306484756|gb|ADM91625.1| peptide chain release factor 2 [Streptococcus pneumoniae 670-6B]
          Length = 329

 Score =  260 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 150/328 (45%), Positives = 205/328 (62%), Gaps = 2/328 (0%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             K  +P  W + I A+   +E   L N  +   ++++   +  ILL+   E++      
Sbjct: 2   ENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHDEL 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
                       +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+  
Sbjct: 62  VAQLAELD--KIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGN 119

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF
Sbjct: 120 AKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSF 179

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +
Sbjct: 180 TSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVD 239

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           R+Q+ N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD 
Sbjct: 240 RTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDH 299

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           RT+ E      V+DGDLD F+ A L  +
Sbjct: 300 RTSFEVAQVDKVMDGDLDGFIDAYLKWR 327


>gi|315612838|ref|ZP_07887749.1| peptide chain release factor RF2 [Streptococcus sanguinis ATCC
           49296]
 gi|315314948|gb|EFU62989.1| peptide chain release factor RF2 [Streptococcus sanguinis ATCC
           49296]
          Length = 329

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 153/328 (46%), Positives = 210/328 (64%), Gaps = 2/328 (0%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             K  +P  W + I A+   +E   L N  +  +++++   +  ILL+     +D S+  
Sbjct: 2   ENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDF--LAEDESVHD 59

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E  + L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+  
Sbjct: 60  ELVEQLTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGN 119

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF
Sbjct: 120 AKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSF 179

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG VVQ   +
Sbjct: 180 TSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVD 239

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           R+Q+ N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD 
Sbjct: 240 RTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDH 299

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           RT+ E      V+DGDLD F+ A L  +
Sbjct: 300 RTSFEVAQVDKVMDGDLDGFIDAYLKWR 327


>gi|212702489|ref|ZP_03310617.1| hypothetical protein DESPIG_00506 [Desulfovibrio piger ATCC 29098]
 gi|212674150|gb|EEB34633.1| hypothetical protein DESPIG_00506 [Desulfovibrio piger ATCC 29098]
          Length = 366

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 168/347 (48%), Positives = 227/347 (65%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD   + QRL+ + T+   P+ W N      L+RE++ L++ ++ +  ++    
Sbjct: 15  TTFGGVFDVAASEQRLAAIETELSRPNAWDNPEALTPLLREKRQLEDEVARLNALKTCHD 74

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D    LELA+E  +   L+  +     +   ++  +   LLSGE D+ DA LE+H GAGG
Sbjct: 75  DMHEWLELAVESGEDEALESLAKQQDSLDALLDETELVMLLSGEEDNQDAILEIHPGAGG 134

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TESQDWA MLLRMYTRWA +R F  E L+   G+EAGIKS TL I GP+A+G+LK E+G+
Sbjct: 135 TESQDWAEMLLRMYTRWAARRHFTVEELDYLPGDEAGIKSVTLRISGPHAFGFLKSERGI 194

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRL+RISP+D++ RRHTSF+S+ V P V D I+++I E+D R DT+R+SG GGQ VNTT 
Sbjct: 195 HRLIRISPFDASGRRHTSFASVDVMPDVGDDIQLDIKETDLRFDTFRSSGPGGQSVNTTS 254

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+  QCQ E+SQH NK  A  +L+A+LY LELQKRE       + K  I 
Sbjct: 255 SAVRVTHIPTGISAQCQNEKSQHHNKEAALCILKARLYNLELQKREAERAAQYAGKDAIA 314

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +G QIR+Y LQPY++VKD RTN E      VLDG +D F    L  +
Sbjct: 315 FGSQIRTYTLQPYRLVKDHRTNSECGDVEAVLDGQIDQFQHDYLLYR 361


>gi|187250476|ref|YP_001874958.1| peptide chain release factor 2 [Elusimicrobium minutum Pei191]
 gi|186970636|gb|ACC97621.1| Peptide chain release factor 2 [Elusimicrobium minutum Pei191]
          Length = 371

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 164/350 (46%), Positives = 224/350 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS ++   G L       ++L+ L  +      W +   A+ + +E   +   +     
Sbjct: 15  ELSARIKNAGALIRVGEKKEKLAKLEAEISKESFWNDSDNARQVSKEADAVKTELETFSA 74

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +Q  + D +   E+ALEE+  + + E S  L +I+ E++  +F+  LS  AD  +A + +
Sbjct: 75  LQKEMDDAVTYYEMALEENSETEMGEISSFLIKIENELKEIEFKIKLSDPADRLNAIMHI 134

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTES DWA MLLRMYTRWAE    K +  +I  GEEAG+KS +L+I+G  AYG+L
Sbjct: 135 HAGAGGTESCDWAQMLLRMYTRWAENHGLKVKITDILPGEEAGVKSVSLMIEGLYAYGYL 194

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D+NSRRHTSF+S  V P ++D I+IEI E D  +DT+R+ GAGGQ
Sbjct: 195 KSENGVHRLVRISPFDANSRRHTSFASCDVLPDIEDEIKIEIEEKDLEVDTFRSGGAGGQ 254

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++AVRI HIPTG+VV CQ ERSQ +N+  A  MLRAKLY++E  K+         
Sbjct: 255 NVNKVETAVRIKHIPTGIVVACQIERSQLQNRQTAMKMLRAKLYQIEADKKRSEMEKHYG 314

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            K +I WG QIRSYV  PYQ+VKDLRT  E +    V+DGDLD FM++ L
Sbjct: 315 QKGDIAWGHQIRSYVFMPYQLVKDLRTGYETSQVQAVMDGDLDAFMQSYL 364


>gi|302521474|ref|ZP_07273816.1| peptide chain release factor 2 [Streptomyces sp. SPB78]
 gi|318056789|ref|ZP_07975512.1| peptide chain release factor 2 [Streptomyces sp. SA3_actG]
 gi|318081122|ref|ZP_07988454.1| peptide chain release factor 2 [Streptomyces sp. SA3_actF]
 gi|302430369|gb|EFL02185.1| peptide chain release factor 2 [Streptomyces sp. SPB78]
          Length = 371

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 156/353 (44%), Positives = 217/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D   + ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDKMREDIASLEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEGL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA +E D    +E    L  ++  ++  +  +LLSGE DS +A + + 
Sbjct: 73  RGRIDDLGVLFELAADEGDADTQEEAEQELAAVRKALDEMEVRTLLSGEYDSREAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  +  P AYG L 
Sbjct: 133 AEAGGVDASDFAERLQRMYLRWAERLGYKTELYETSYAEEAGIKSTTFAVHVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +E  N  +  
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQEKMNALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRK 364


>gi|260584689|ref|ZP_05852435.1| peptide chain release factor 2 [Granulicatella elegans ATCC 700633]
 gi|260157712|gb|EEW92782.1| peptide chain release factor 2 [Granulicatella elegans ATCC 700633]
          Length = 331

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 157/324 (48%), Positives = 214/324 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W +  +A+M++++   L        +++ ++ +  +L E+  E+ +  I  E  
Sbjct: 1   MSEPGFWDDNEKAQMVIQKSNELKAVYDTFHQLELQVEEVELLFEMYKEDPEEEIHDELV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  ++ E+E  +   LLSG  D   A LE+H GAGGTESQDW +MLLRMYTRWAE+  
Sbjct: 61  ERVHSVEKELEKYELSMLLSGPHDKCSAILEIHPGAGGTESQDWGSMLLRMYTRWAEQHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           ++ E ++  DGEEAGIKS TL I+G NAYG+LK E+GVHRLVRISP+D+  +RHTSF SI
Sbjct: 121 YRIETVDYQDGEEAGIKSVTLSIEGLNAYGYLKSEKGVHRLVRISPFDAAGKRHTSFCSI 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + P ++  I+IEI+  D +ID YRASGAGGQH+N T SAVRITHIPTG+V Q Q +RSQ
Sbjct: 181 DIMPQLEGDIDIEINPDDLKIDVYRASGAGGQHINKTSSAVRITHIPTGIVTQSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KNK QA  ML+ KLY+LE +K+          + +I WG QIR+YV  PY +VKDLR+ 
Sbjct: 241 FKNKDQAMAMLKTKLYQLEEEKKAAELAEIRGEQKDIAWGSQIRNYVFHPYSLVKDLRSG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  +   V+DGDLD FM A L  
Sbjct: 301 HETGNIGAVMDGDLDPFMDAYLKW 324


>gi|116873873|ref|YP_850654.1| peptide chain release factor 2 [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116742751|emb|CAK21875.1| peptide chain release factor 2 [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 327

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 168/325 (51%), Positives = 214/325 (65%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP+ W +   A+ ++ E             +++      I LEL  EE D  +  E  
Sbjct: 1   MLDPNFWNDQQAAQKIINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQAELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            ++      +   + + +LS   D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ 
Sbjct: 61  KDITAYMATINEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+
Sbjct: 121 FKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ
Sbjct: 181 DVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNRDQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLDDF+ A L  +
Sbjct: 301 YETGNIQAVMDGDLDDFINAYLRSR 325


>gi|330465934|ref|YP_004403677.1| peptide chain release factor 2 [Verrucosispora maris AB-18-032]
 gi|328808905|gb|AEB43077.1| peptide chain release factor 2 [Verrucosispora maris AB-18-032]
          Length = 373

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 162/355 (45%), Positives = 220/355 (61%), Gaps = 5/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D      + L  +   P LW +   A+ +  +  +++  I  +  +
Sbjct: 13  LDATLRNIEAVLDLDRLRADKARLEQEASAPDLWDDQARAQQVTSQLSYVNGEIEKLGSL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLELA  E D  +L E    +  +   ++  +  +LLSGE DS +A + + 
Sbjct: 73  RSRIDDANVLLELAEAEADSGVLSEVESEITGLAKAIQEMEVRTLLSGEYDSREALVAIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A MLLRMY RWAE+  + TE  E    EEAG+KSAT  +K P AYG L 
Sbjct: 133 AGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFTVKVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I E++ RID YR+SG GGQ 
Sbjct: 193 VESGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDSIDIPENEMRIDVYRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV CQ E+SQ +NKA A  +L+A+L E   +KR+E        
Sbjct: 253 VNTTDSAVRITHIPTGIVVTCQNEKSQLQNKASALRVLQARLLE---RKRQEEQAKMAGL 309

Query: 303 KTEI--GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           KT+    WG Q+RSYVL PYQMVKDLRT  E  +PS V DGDLD F++A +  +K
Sbjct: 310 KTDAAGSWGDQMRSYVLHPYQMVKDLRTEQETGNPSAVFDGDLDSFIEAGIRWRK 364


>gi|171780065|ref|ZP_02920969.1| hypothetical protein STRINF_01853 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281413|gb|EDT46848.1| hypothetical protein STRINF_01853 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 336

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 150/336 (44%), Positives = 208/336 (61%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L  K  +P  W + I A+   +E   L        E+Q+   +  + LE+  E
Sbjct: 1   MEEDIALLENKMTEPDFWNDNIAAQKTSQELNGLKQTYETFNEMQELSDETELYLEMLDE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +D      E +         +   +   LLS   D N+A LE+H G+GGTE+QDWA+ML 
Sbjct: 61  DDSIQAELEETLEKLD--KIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADMLF 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTR+   + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS
Sbjct: 119 RMYTRYGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSFSS+ V P +DD++E+EI + D ++DT+R+ GAGGQ+VN   + +R+THIPTG
Sbjct: 179 AKRRHTSFSSVEVMPELDDTVEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGIRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  
Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RT  E      V+DGD+D F+ A L  +
Sbjct: 299 PYTMVKDHRTGYEVAQVDKVMDGDIDGFIDAFLKWR 334


>gi|289551384|ref|YP_003472288.1| peptide chain release factor 2 [Staphylococcus lugdunensis
           HKU09-01]
 gi|289180915|gb|ADC88160.1| peptide chain release factor 2 [Staphylococcus lugdunensis
           HKU09-01]
          Length = 334

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 154/327 (47%), Positives = 214/327 (65%), Gaps = 1/327 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              +P+ W +  +A+ ++ +   L        ++ + + D     EL  EE D  +  E 
Sbjct: 1   MMTEPNFWDDQNKAQDIIDKNNALKAITMGYHDLDNEVEDMFATTELLQEEYDEDMKAEL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
             ++     +++  + + LL G  D+N+A LE+H GAGGTESQDWA+MLLRMY R+ E+ 
Sbjct: 61  EMDVLAFNDKLDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYCEQN 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E ++   G+EAGIKS TLL+KG NAYG+LK E+GVHRLVRISP+D++ RRHTSF+S
Sbjct: 121 GFKVETVDYLPGDEAGIKSVTLLVKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFAS 180

Query: 209 IWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
             V P   ++ IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ER
Sbjct: 181 CDVIPDFNNNEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KN+  A  ML++KLY+L+L+++ +        + EIGWG QIRSYV  PY MVKD R
Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQAQEMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354
           TN E      V+DGD+  F++A L  +
Sbjct: 301 TNEETGKVDAVMDGDIGPFIEAYLRQQ 327


>gi|239941657|ref|ZP_04693594.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL
           15998]
 gi|239988119|ref|ZP_04708783.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL
           11379]
          Length = 352

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 153/349 (43%), Positives = 213/349 (61%), Gaps = 1/349 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + ++ R+
Sbjct: 1   MGSIEAVLDLDALRADIAALEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEALRGRI 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D  +L ELA  E D     E    L+ +K  ++  +  +LLSGE D+ +A + + A AG
Sbjct: 61  DDLEVLFELAEAEGDADAQAEAETELESVKKALDEMEVRTLLSGEYDAREALVTIRAEAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L  EQG
Sbjct: 121 GVDAADFAEKLQRMYLRWAEQHNYKTEVYETAYAEEAGIKSTTFAVQVPYAYGTLSVEQG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ VNTT
Sbjct: 181 THRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   N  +      
Sbjct: 241 DSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMNALKGDGGN- 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 300 SWGNQMRSYVLHPYQMVKDLRTEFEMGNPEAVFNGEIDGFVEAGIRWRK 348


>gi|134300908|ref|YP_001114404.1| peptide chain release factor 2 [Desulfotomaculum reducens MI-1]
 gi|134053608|gb|ABO51579.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfotomaculum
           reducens MI-1]
          Length = 332

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 156/324 (48%), Positives = 213/324 (65%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
                 W ++  ++ + ++   L + ++    ++  L D  ++LEL  EE D  + +E S
Sbjct: 1   MLKDGFWDDLTYSQKVSQKLAGLKDRVAAFNTLESSLQDLEVMLELCQEEQDPLLEEEFS 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L  +   +E  + E +L+G  D  DA L +H GAGGTESQDWA MLLRMYTR+ E   
Sbjct: 61  SELSTLTGRLEEMELEIMLAGPYDRGDAILSLHPGAGGTESQDWAQMLLRMYTRYCENHN 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K E L++  G+EAGIKSAT+ + GPNAYG+L+ E+GVHRLVRISP+D+  RRHTSF+S+
Sbjct: 121 YKVEILDLLPGDEAGIKSATIQVTGPNAYGYLRCEKGVHRLVRISPFDAAGRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P+VDD +E+ I   D RIDTYRA GAGGQHVN TDSAVRITH+PTG+VV CQ ERSQ
Sbjct: 181 DVLPLVDDEVEVNIRPEDLRIDTYRAGGAGGQHVNKTDSAVRITHLPTGIVVACQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             N+  A  +L++KL +LELQK+E+        + +I WG QIRSYV  PY + KD RT 
Sbjct: 241 TTNRQAAMKLLKSKLIDLELQKKEDEMAALRGEQKDIAWGSQIRSYVFHPYSLAKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  + + V+DG++  F+ A L  
Sbjct: 301 EETGNVNAVMDGNIGQFVTAYLKY 324


>gi|253575894|ref|ZP_04853228.1| peptide chain release factor 2 [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251844688|gb|EES72702.1| peptide chain release factor 2 [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 342

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 169/336 (50%), Positives = 230/336 (68%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++    K   P  W +  +A+ ++ E   + +++     +Q+   +  ++ ELA E
Sbjct: 2   KQEMIANYEEKMAAPDFWDDNEKAQGIIAEMNAVKSSVDQYTALQNEYDELEMMAELAEE 61

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D S+  E +D+++++  ++E  + + LL+   D  +A LE+H GAGGTESQDW  MLL
Sbjct: 62  EGDESLAAEVADSVEKLVKKLEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLL 121

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTRWAEKR FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+D+
Sbjct: 122 RMYTRWAEKRGFKVETLDYLPGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDA 181

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           + RRHTSF S  V P + D +EIEI   D +IDTYRASGAGGQH+NTTDSAVRITHIPTG
Sbjct: 182 SGRRHTSFVSCDVVPEISDDVEIEIRNEDLKIDTYRASGAGGQHINTTDSAVRITHIPTG 241

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV CQ ERSQ KN+ +A  MLR+KLYE ++++++   +     +++I WG QIRSYV  
Sbjct: 242 IVVTCQNERSQIKNRERAMTMLRSKLYERKIEEQQRELDEIRGEQSDIAWGSQIRSYVFH 301

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN+E  +   V+DGDLD F+   L  +
Sbjct: 302 PYSMVKDHRTNVETGNVGAVMDGDLDAFIDGYLRSQ 337


>gi|149924687|ref|ZP_01913037.1| peptide chain release factor 2 [Plesiocystis pacifica SIR-1]
 gi|149814444|gb|EDM74035.1| peptide chain release factor 2 [Plesiocystis pacifica SIR-1]
          Length = 354

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 167/346 (48%), Positives = 225/346 (65%), Gaps = 2/346 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD+    +RL      T DP  W++   A+ ++RE+  L   +  I ++Q  + D  
Sbjct: 4   GGIFDYAGKRERLEEYEIATGDPSFWEDNERAQKILREQSTLKKLVEQIDDVQQTIDDGR 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L EL  EE D   + E  +NL +    +   +F  +LSG  D + A L ++AGAGG +S
Sbjct: 64  ELYELGREESDTESIVEAWENLGQADALLGKLEFRRMLSGTHDEDSALLSINAGAGGVDS 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMY RW E++ F  + L+I +G++AGI+ A L I+G  AYGWL+ E GVHRL
Sbjct: 124 QDWAEMLLRMYQRWGERQGFDVKVLDIQEGDQAGIRGADLAIEGDYAYGWLRSEIGVHRL 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPV--VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           VRISP+DS +RR TSF+SI V P        EIE++ +D R+D YRASGAGGQHVN T+S
Sbjct: 184 VRISPFDSQARRQTSFASIMVLPDLGDGKDFEIEVNPADLRVDKYRASGAGGQHVNKTES 243

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+TH PTG+VV CQ ERSQHKN A A  ML+AKL++LE Q+R +  +  E  K  I W
Sbjct: 244 AVRLTHEPTGIVVACQMERSQHKNMATAMRMLKAKLWDLEQQRRSDEISALEGDKKAIEW 303

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           G QIRSYV+ PYQ V D RT +++ +   VLDGDL  +M+A L ++
Sbjct: 304 GSQIRSYVIHPYQQVNDHRTELKQGNVDAVLDGDLGSYMEAFLLMQ 349


>gi|309804632|ref|ZP_07698697.1| peptide chain release factor 2 [Lactobacillus iners LactinV 09V1-c]
 gi|308166024|gb|EFO68242.1| peptide chain release factor 2 [Lactobacillus iners LactinV 09V1-c]
          Length = 359

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 154/351 (43%), Positives = 220/351 (62%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +    + LGGLFD+DN  + ++    K  D   W +   A+ ++    ++   +   + +
Sbjct: 1   MKNNCHILGGLFDFDNLKESIAINEQKMADDTFWNDQTNAQKIIEATNYMREKVDKYQTL 60

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D    +EL   E +  +L E +  ++++K E    +   LLSG+ D ++A LE+H
Sbjct: 61  SAALADAKTAVELYNMEPENDMLMEITAEVEKLKNEFNNYELHLLLSGKYDDHNALLEIH 120

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTE+ DWANML RMY RW +      E  +   G+EAG+KS ++ ++G NA+G LK
Sbjct: 121 SGAGGTEAMDWANMLFRMYQRWCDSHNLTFEVDDFQVGDEAGLKSVSVRVQGNNAFGLLK 180

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DS  RRHTSF+S+ V P +D SI IEI+  D RID YR+SGAGGQH
Sbjct: 181 SENGVHRLVRISPFDSAKRRHTSFASVEVIPEIDKSINIEINPDDLRIDVYRSSGAGGQH 240

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T SAVRITH+PTG+V   Q +RSQ +N+  A +MLRAKL++LE  K+ +     + +
Sbjct: 241 INKTSSAVRITHLPTGIVTSSQAQRSQFQNRETAMDMLRAKLFKLEEDKKRKQTEALKGN 300

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           + EI +G QIRSYV  PY MVKD RT+ E +    V++G+LD F+ A L  
Sbjct: 301 QKEINFGSQIRSYVFHPYNMVKDHRTDYETSDTIGVMNGNLDPFIYAYLQW 351


>gi|290968807|ref|ZP_06560344.1| peptide chain release factor 2 [Megasphaera genomosp. type_1 str.
           28L]
 gi|290781103|gb|EFD93694.1| peptide chain release factor 2 [Megasphaera genomosp. type_1 str.
           28L]
          Length = 352

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 152/337 (45%), Positives = 221/337 (65%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             +R+  L+ +  DP  W +   A+ + +E   L   +   + + +++ D    LELA+E
Sbjct: 4   KEERIMDLDIQMSDPDFWNHPDTARRISQEATALKEEVQGHRALMEQVADLREYLELAME 63

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D S+  +     + +  EVE ++   LLSGE D  +A +  HAGAGGTE+QDW  ML+
Sbjct: 64  EKDTSLTADIEKQYEALAGEVEKREIRLLLSGEYDRCNAIVTFHAGAGGTEAQDWTQMLI 123

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTRWAE+  +    +++  G+EAG+KSAT  + G  AYG+LK E+GVHRLVRISP+D+
Sbjct: 124 RMYTRWAERNGYVMRLMDLQPGDEAGVKSATFSVDGEYAYGYLKSEKGVHRLVRISPFDA 183

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
            +RRHTSF+++ V P + D ++++I+  + R+D +RASGAGGQHVN T SAVR+TH+PTG
Sbjct: 184 AARRHTSFTAVDVMPELPDDVDVKINMDEVRVDYFRASGAGGQHVNKTSSAVRMTHLPTG 243

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VVQCQ ERSQ +NK      LRAKL+ELE +K+ ++      +   I WG QIRSYV  
Sbjct: 244 IVVQCQNERSQLQNKEMCLKYLRAKLFELEEEKKAQLKAEIGGTHQAIEWGSQIRSYVFH 303

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           PY +VKD RT++E  +   V+DG+LD F++  L  +K
Sbjct: 304 PYNLVKDHRTDVETGNTQAVMDGELDKFIEGFLQREK 340


>gi|307265609|ref|ZP_07547163.1| peptide chain release factor 2 [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919407|gb|EFN49627.1| peptide chain release factor 2 [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 330

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 161/325 (49%), Positives = 223/325 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W ++ +++ L ++++ L   +     +  +  D   L+EL LEE D SI  E  
Sbjct: 1   MSDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLNTLIELGLEEGDESITDEVD 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + +K ++E  + ++LL+G  D N+A L +HAG+GGTE+QDWA MLLRMYTRWA  + 
Sbjct: 61  KEYKELKKKLEDLKIKTLLNGPYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+ E ++   GEEAGIKS TL+IKGP AYG+LK E GVHRLVRISP+D+  RRHTSF+ +
Sbjct: 121 FEVETIDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ IE+EI   D +IDTYRASGAGGQ+VN T+SAVRITH+PTG+VV CQ ERSQ
Sbjct: 181 EVLPELENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A  ML+AKL +L +++++E     +    E  WG QIRSYV QPY +VKD RTN
Sbjct: 241 IQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E+ + + V+DG++D F+ A L  K
Sbjct: 301 YEEGNVNAVMDGEIDGFINAYLKQK 325


>gi|256848105|ref|ZP_05553549.1| peptide chain release factor 2 [Lactobacillus coleohominis
           101-4-CHN]
 gi|256715165|gb|EEU30142.1| peptide chain release factor 2 [Lactobacillus coleohominis
           101-4-CHN]
          Length = 332

 Score =  259 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 160/325 (49%), Positives = 214/325 (65%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +  +A+ L+ +   L         ++D+L D    +EL  E  D  + +E  
Sbjct: 1   MTAPDFWNDSEQAQKLINDNNQLKERRDTFTNLRDQLADLATSVELLKEMPDDDLQKELD 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L +++ ++E  +   LLSG  D+N+A LE+H GAGGTE+QDW  MLLRMY RWA++  
Sbjct: 61  QKLPQVEKQLEQYRLSQLLSGPYDANNAILEIHPGAGGTEAQDWGEMLLRMYLRWADQHS 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E      GEEAGIKS TLLIKG NA+G+L  E+GVHRLVRISP+D+  RRHTSF+S+
Sbjct: 121 FDVETAAYEAGEEAGIKSVTLLIKGHNAFGYLHPEKGVHRLVRISPFDAAGRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D+S+E++I  SD R+DT+R+SGAGGQH+N T+SAVRITH+PTG+V   Q ERSQ
Sbjct: 181 DVMPELDESVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHLPTGIVTSSQAERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A NML++KLYELE +K+ +     E  + EIGWG QIRSYV  PY +VKD RT 
Sbjct: 241 LQNRVTAMNMLKSKLYELEQEKQAKQRAELEGEQLEIGWGSQIRSYVFHPYTLVKDNRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 301 YETHDGQSVMDGDLDPFINAYLQWQ 325


>gi|296169215|ref|ZP_06850868.1| peptide chain release factor RF2 [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295896113|gb|EFG75780.1| peptide chain release factor RF2 [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 368

 Score =  259 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 167/354 (47%), Positives = 223/354 (62%), Gaps = 5/354 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R+  L  +  DP LW +   A+ +  +  H    +  I+E+
Sbjct: 12  LDSTLTTVERVLDVDGLRSRIEKLEHEASDPQLWDDQSNAQRVTSQLSHAQGELRRIEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L ELA EED    L E    L+ ++ ++E  +  +LLSGE D  +A + + 
Sbjct: 72  RQRLDDLPVLYELAAEEDAADALAEADAELKALRADIEATEVRTLLSGEYDEREALVTIR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG L 
Sbjct: 132 SGAGGVDAADWAEMLMRMYLRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+ SRR TSF+ + V PVVD +  I+I E D R+D YR+SG GGQ 
Sbjct: 192 VEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVDTTDHIDIPEGDVRVDVYRSSGPGGQS 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL E   +KR E     ++ 
Sbjct: 252 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKISAMRVLQAKLLE---RKRSEERAELDAL 308

Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K E G  WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +  +
Sbjct: 309 KGEGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWR 362


>gi|225375950|ref|ZP_03753171.1| hypothetical protein ROSEINA2194_01587 [Roseburia inulinivorans DSM
           16841]
 gi|225212203|gb|EEG94557.1| hypothetical protein ROSEINA2194_01587 [Roseburia inulinivorans DSM
           16841]
          Length = 338

 Score =  259 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 157/324 (48%), Positives = 219/324 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ED   W + + ++  M+  + + + ++  +++  +  D   L+E+  EE+D S++ E  
Sbjct: 1   MEDGDFWNDPVVSQNKMKTLKSMKDDVATYEKLATQFDDIETLIEMGYEENDASLIPEIE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L       +  + ++LLSGE D ++A L +HAGAGGTES DWA ML RMY++WA+ R 
Sbjct: 61  EMLNEFVTTFDNIRIKTLLSGEYDGDNAILSLHAGAGGTESCDWAQMLFRMYSKWADSRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           ++   L+  DG+EAGIKS T  I G NAYG+LK E+GVHRLVRISP+++  +R TSF S 
Sbjct: 121 YELVVLDSLDGDEAGIKSITFQINGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ ++IEI+E D RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQ
Sbjct: 181 DVMPDIEEDLDIEINEDDLRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H+NK +A  ML+AKLY L+ Q+  E A       TEIGWG QIRSYV+QPY MVKD RT 
Sbjct: 241 HQNKDKAMQMLKAKLYLLKEQENAEKAAGIRGEVTEIGWGNQIRSYVMQPYTMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
           +E  +   V+DG +D F+   L  
Sbjct: 301 VETGNVDSVMDGKIDLFINGYLKW 324


>gi|319891756|ref|YP_004148631.1| Peptide chain release factor 2 [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317161452|gb|ADV04995.1| Peptide chain release factor 2 [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323465075|gb|ADX77228.1| peptide chain release factor 2 [Staphylococcus pseudintermedius
           ED99]
          Length = 329

 Score =  259 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 156/327 (47%), Positives = 220/327 (67%), Gaps = 1/327 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              DP  W N   A+ ++ +   + + ++   E+ + L + +   EL  EE D  +  + 
Sbjct: 1   MMADPQFWDNQERAQTIIDQNNAIKSVVNNYYEVAETLEEMIATYELLQEEYDDEMKDDL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              +   + +V+  + + LL GE D+N+A LE+H GAGGTESQDW NMLLRMY R+ E++
Sbjct: 61  EQEVIGFQTKVDQFELQLLLDGEHDANNAILELHPGAGGTESQDWTNMLLRMYQRYCEQQ 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E ++   G+EAG+KS T+L+KG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S
Sbjct: 121 GFKVEIVDYQAGDEAGVKSVTMLVKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180

Query: 209 IWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
             V P   ++ IE+EI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ER
Sbjct: 181 CDVIPEFNNEKIEVEINSDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KN+  A  ML+AKLY+LEL+++E+        + +IGWG QIRSYV  PY MVKD R
Sbjct: 241 SQIKNREAAMKMLKAKLYQLELEQKEQELAAIRGEQKDIGWGSQIRSYVFHPYSMVKDHR 300

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354
           TN E  + + V+DG++  F++A L  +
Sbjct: 301 TNEETGNVNAVMDGEIGPFIEAYLRHQ 327


>gi|315221796|ref|ZP_07863708.1| peptide chain release factor 2 [Streptococcus anginosus F0211]
 gi|315189029|gb|EFU22732.1| peptide chain release factor 2 [Streptococcus anginosus F0211]
          Length = 325

 Score =  259 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 147/325 (45%), Positives = 203/325 (62%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L       +++ D   ++ ILL+   E+D      E  
Sbjct: 1   MTEPDFWDDNIAAQKTSQELNELKQTYDNFQQMADLFDESEILLDFLAEDDSVQEELEEK 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
                 K  +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+     
Sbjct: 61  LAELETK--MTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAHG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEIE+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+V Q   +R+Q
Sbjct: 179 EVMPELDDTIEIEVRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  +L+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT 
Sbjct: 239 YGNRDRAMKLLQAKLYQMEQEKKAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTG 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGD+D F+ A L  +
Sbjct: 299 FEVAQVDKVMDGDIDGFIDAYLKWR 323


>gi|15902709|ref|NP_358259.1| peptide chain release factor 2 [Streptococcus pneumoniae R6]
 gi|116516272|ref|YP_816152.1| peptide chain release factor 2 [Streptococcus pneumoniae D39]
 gi|182683675|ref|YP_001835422.1| peptide chain release factor 2 [Streptococcus pneumoniae CGSP14]
 gi|303255830|ref|ZP_07341871.1| peptide chain release factor 2 [Streptococcus pneumoniae BS455]
 gi|15458252|gb|AAK99469.1| Peptide chain release factor 2 [Streptococcus pneumoniae R6]
 gi|116076848|gb|ABJ54568.1| peptide chain release factor 2 [Streptococcus pneumoniae D39]
 gi|182629009|gb|ACB89957.1| peptide chain release factor 2 [Streptococcus pneumoniae CGSP14]
 gi|302597214|gb|EFL64319.1| peptide chain release factor 2 [Streptococcus pneumoniae BS455]
          Length = 329

 Score =  259 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 149/328 (45%), Positives = 206/328 (62%), Gaps = 2/328 (0%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             K  +P  W + I A+ + +E   L N  +   ++++   +  ILL+   E++      
Sbjct: 2   ENKMTEPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHDEL 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
                       +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+  
Sbjct: 62  VAQLAELD--KIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGN 119

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF
Sbjct: 120 AKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSF 179

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+T+IPTG+VVQ   +
Sbjct: 180 TSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVVQSTVD 239

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           R+Q+ N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD 
Sbjct: 240 RTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDH 299

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           RT+ E      V+DGDLD F+ A L  +
Sbjct: 300 RTSFEVAQVDKVMDGDLDGFIDAYLKWR 327


>gi|319779400|ref|YP_004130313.1| Peptide chain release factor 2 [Taylorella equigenitalis MCE9]
 gi|317109424|gb|ADU92170.1| Peptide chain release factor 2 [Taylorella equigenitalis MCE9]
          Length = 327

 Score =  259 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 167/325 (51%), Positives = 239/325 (73%), Gaps = 1/325 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + EDP++W +  +A+ L +E++ L++ +  + E++  + D+  L  LALE++D S L   
Sbjct: 2   ELEDPNIWNDPEKAQSLSKEKKSLEDVVIVLSELEQSIRDSKDLYTLALEDNDDSTLIAI 61

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            ++ ++   ++E  +F  + S  AD  + ++++  GAGGTE+QDWA+MLLR Y R+ E++
Sbjct: 62  EEDSKKYLEKIEGLEFRRMFSQPADPLNCFIDIQFGAGGTEAQDWASMLLRQYLRYCERK 121

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FKTE LE   G+ AGIKSAT+ ++G  A+G L+ E GVHRLVR SP+DS + RHTSF+S
Sbjct: 122 GFKTEVLEESAGDVAGIKSATIKVEGDYAFGLLRTESGVHRLVRKSPFDSANGRHTSFAS 181

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           ++VYP +DDSIE++I+ +D RIDTYRASGAGGQH+N TDSAVRITH PTG+VVQCQ +RS
Sbjct: 182 LYVYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQCQNDRS 241

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QH+NKA+A +ML++KLYELEL+KR       E SK+++GWG QIRSYVL     +KDLRT
Sbjct: 242 QHRNKAEAMSMLKSKLYELELRKRMAEQQKLEESKSDVGWGHQIRSYVLD-QSRIKDLRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353
           N+E ++   VLDGDLD F++A+L  
Sbjct: 301 NVEVSNTQKVLDGDLDMFIEASLKQ 325


>gi|160941606|ref|ZP_02088937.1| hypothetical protein CLOBOL_06506 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435500|gb|EDP13267.1| hypothetical protein CLOBOL_06506 [Clostridium bolteae ATCC
           BAA-613]
          Length = 339

 Score =  259 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 155/324 (47%), Positives = 219/324 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E+P  W    ++  ++RE ++L + +   + ++ +  D  +++++  EE+D S++ E  
Sbjct: 1   MEEPGFWDEPEQSTRMVRESKNLKDEVDTYRALEQQYEDIQVMIQMGYEENDSSLIPEIE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L++ K  +E  + + LLSGE DSN+A L ++AGAGGTES DW ++L RMY RWAE + 
Sbjct: 61  EMLEQFKETLENMRMKLLLSGEYDSNNAILRLNAGAGGTESCDWCSILYRMYCRWAESKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK   L+  DGEEAGIKS T+ I G NAYG+L+ E GVHRLVRISP++S  +R TSF S 
Sbjct: 121 FKAHVLDFLDGEEAGIKSVTVQIDGENAYGYLRSEHGVHRLVRISPFNSAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ I+IE++  D R+DTYR+SGAGGQH+N T SA+RITH PTG+VV CQ ERSQ
Sbjct: 181 DVMPNIEEDIDIEVNPDDIRVDTYRSSGAGGQHINKTSSAIRITHFPTGIVVTCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK +A  ML+AKL  ++ +++   A        +IGWG QIRSYVLQPY MVKD RT 
Sbjct: 241 FQNKEKAMQMLKAKLLMVKQEEQAAKAAGIRGDVKDIGWGSQIRSYVLQPYTMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  +   VLDG +D+F+ A L  
Sbjct: 301 EESGNVDAVLDGAIDNFISAYLRW 324


>gi|295115079|emb|CBL35926.1| bacterial peptide chain release factor 2 (bRF-2)
           [butyrate-producing bacterium SM4/1]
          Length = 333

 Score =  259 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 153/324 (47%), Positives = 220/324 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E+P  W +   +  LMRE ++L + +   ++++    D  ++LE+  EE+D S++ E  
Sbjct: 1   MEEPGFWDDPEMSTRLMREAKNLKDTVESYRKLEQEYEDIQVMLEMGYEENDPSLIPEIQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             +     ++E  + ++LLSGE D+N+A L+++AGAGGTE+ DW +ML RMY RWA+K+ 
Sbjct: 61  GMMDDFVEKLEAIRIQTLLSGEYDNNNAILKLNAGAGGTEACDWCSMLYRMYQRWADKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F T  ++  DGEEAGIKS TL I G NAYG+LK E+GVHRLVRISP++S  +R TSF S 
Sbjct: 121 FTTAVIDYLDGEEAGIKSITLQINGENAYGFLKSERGVHRLVRISPFNSAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + + +++E++  + RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQ
Sbjct: 181 DVMPDIKEDLDVEVNPDELRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK  A  ML+ KLY ++ ++  E  +       +I +G QIRSYV+QPY +VKD RT 
Sbjct: 241 FQNKEVAMQMLKTKLYMMKQEEHAEKLSDIRGDVKDINFGNQIRSYVMQPYTLVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  + + VLDGD+D F+ A L  
Sbjct: 301 AESGNVNAVLDGDIDLFISAYLKW 324


>gi|289435770|ref|YP_003465642.1| peptide chain release factor RF-2 [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
 gi|289172014|emb|CBH28560.1| peptide chain release factor RF-2 [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
          Length = 327

 Score =  259 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 168/325 (51%), Positives = 215/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP+ W +   A+ ++ E             +++      I LEL  EE D  + +E  
Sbjct: 1   MLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            ++      +   + + +LS   D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ 
Sbjct: 61  KDITAYMATINAFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+
Sbjct: 121 FKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ
Sbjct: 181 DVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNRDQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLDDF+ A L  +
Sbjct: 301 YETGNIQAVMDGDLDDFINAYLRSR 325


>gi|83589099|ref|YP_429108.1| peptide chain release factor 2 [Moorella thermoacetica ATCC 39073]
 gi|83572013|gb|ABC18565.1| bacterial peptide chain release factor 2 (bRF-2) [Moorella
           thermoacetica ATCC 39073]
          Length = 330

 Score =  259 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 157/326 (48%), Positives = 222/326 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W++   A+ + +   +L   ++  +E++ +  D   L +LAL EDD S+ +E +
Sbjct: 1   MLAPGFWEDRARAEAVGKRLTYLKEKLARYRELESKCADVRELWQLALAEDDHSLEEEIA 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L  ++ +VE +   +LL+G  D ++A L +H GAGGTESQDWA MLLRMY RW E R 
Sbjct: 61  RDLAAVEGKVEGQLLATLLNGPYDRHNAILSLHPGAGGTESQDWAAMLLRMYNRWCEDRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           ++ E L+  +GEEAG+KSAT+L+KG NAYG+L+ E+GVHRLVRISP+D+  RRHTSF+S+
Sbjct: 121 YQVELLDYLEGEEAGLKSATILVKGENAYGYLQAEKGVHRLVRISPFDAAGRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P V+   E+EI+  D +IDT+R+ GAGGQHVN TDSAVRITH+PTG+VV CQ ERSQ
Sbjct: 181 DVIPEVEADEEVEINPDDLKIDTFRSQGAGGQHVNKTDSAVRITHLPTGIVVTCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H N+  A  +L+A+L  L+ Q++E         + EI WG QIRSYV  PY +VKD RT 
Sbjct: 241 HANRLSAMKILQARLAALKRQEQEAELAQIRGEQREIAWGSQIRSYVFHPYSLVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355
           +E  +   V+DG +D F++A L  ++
Sbjct: 301 VETGNIQAVMDGQIDPFIQAYLHWQR 326


>gi|291453772|ref|ZP_06593162.1| peptide chain release factor 2 [Streptomyces albus J1074]
 gi|291356721|gb|EFE83623.1| peptide chain release factor 2 [Streptomyces albus J1074]
          Length = 371

 Score =  259 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 156/353 (44%), Positives = 216/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDRLRAEIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L ELA  EDD     E    L  ++  ++  +  +LLSGE D+ +A + + 
Sbjct: 73  RSRLDDLGVLFELAEAEDDADTRAEAESELASVRKALDEMEVRTLLSGEYDAREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+R +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAVQAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   +  +  
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMDALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEEEMGNPEAVFNGEIDGFLEAGIRWRK 364


>gi|25010633|ref|NP_735028.1| peptide chain release factor 2 [Streptococcus agalactiae NEM316]
 gi|23094987|emb|CAD46208.1| Unknown [Streptococcus agalactiae NEM316]
 gi|319744591|gb|EFV96943.1| peptide chain release factor RF2 [Streptococcus agalactiae ATCC
           13813]
          Length = 337

 Score =  259 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 149/336 (44%), Positives = 214/336 (63%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L  +  +P  W + I A+   +E   L         +Q+   +  +LLE+  E
Sbjct: 1   MEEEIALLENQMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +D   + +E  +NL ++   +   +   LLS   D N+A LE+H G+GGTE+QDW ++LL
Sbjct: 61  DDS--LKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLL 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTR+     FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS
Sbjct: 119 RMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG
Sbjct: 179 AKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  
Sbjct: 239 IVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN E      V+DG+++ F+ A L  +
Sbjct: 299 PYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 334


>gi|183603122|ref|ZP_02712622.2| peptide chain release factor 2 [Streptococcus pneumoniae SP195]
 gi|183573173|gb|EDT93701.1| peptide chain release factor 2 [Streptococcus pneumoniae SP195]
          Length = 329

 Score =  259 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 149/328 (45%), Positives = 206/328 (62%), Gaps = 2/328 (0%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             K  +P  W + I A+ + +E   L N  +   ++++   +  ILL+   E++      
Sbjct: 2   ENKMTEPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHDEL 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
                       +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+  
Sbjct: 62  VAQLAELD--KIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGN 119

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF
Sbjct: 120 AKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSF 179

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+T+IPTG+VVQ   +
Sbjct: 180 TSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVVQSTVD 239

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           R+Q+ N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD 
Sbjct: 240 RTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDH 299

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           RT+ E      V+DGDLD F+ A L  +
Sbjct: 300 RTSYEVAQVDKVMDGDLDGFIDAYLKWR 327


>gi|270292341|ref|ZP_06198552.1| peptide chain release factor 2, programmed [Streptococcus sp. M143]
 gi|270278320|gb|EFA24166.1| peptide chain release factor 2, programmed [Streptococcus sp. M143]
          Length = 329

 Score =  259 bits (661), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 150/328 (45%), Positives = 205/328 (62%), Gaps = 2/328 (0%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             K  +P  W + I A+   +E   L N  +  +++++   +  ILL+   E++      
Sbjct: 2   ENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVRDEL 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
                       +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+  
Sbjct: 62  VEQLTELD--KMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGN 119

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF
Sbjct: 120 AKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSF 179

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG VVQ   +
Sbjct: 180 TSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVD 239

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           R+Q+ N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD 
Sbjct: 240 RTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDH 299

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           RT+ E      V+DGDLD F+ A L  +
Sbjct: 300 RTSFEVAQVDKVMDGDLDGFIDAYLKWR 327


>gi|322376937|ref|ZP_08051430.1| peptide chain release factor 2 [Streptococcus sp. M334]
 gi|321282744|gb|EFX59751.1| peptide chain release factor 2 [Streptococcus sp. M334]
          Length = 329

 Score =  259 bits (661), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 151/328 (46%), Positives = 206/328 (62%), Gaps = 2/328 (0%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             K  +P  W + I A+   +E   L N  +   ++++   +  ILL+   E++      
Sbjct: 2   ENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVQEEL 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
            T  +       +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+  
Sbjct: 62  VTQLSELD--KMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGN 119

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF
Sbjct: 120 AKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSF 179

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG VVQ   +
Sbjct: 180 TSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVD 239

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           R+Q+ N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD 
Sbjct: 240 RTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDH 299

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           RT+ E      V+DGDLD F+ A L  +
Sbjct: 300 RTSFEVAQVDKVMDGDLDGFIDAYLKWR 327


>gi|257870245|ref|ZP_05649898.1| peptide chain release factor 2 [Enterococcus gallinarum EG2]
 gi|257804409|gb|EEV33231.1| peptide chain release factor 2 [Enterococcus gallinarum EG2]
          Length = 329

 Score =  259 bits (661), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 166/325 (51%), Positives = 219/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ ++ E            ++ +   +  +LLE+  EE D  +  E +
Sbjct: 1   MADPTFWDDSEQAQKVINENNANKETYDQFNQLAEEFEELEVLLEMIQEEPDAEMEAELA 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +Q +  ++   +   LL    D N+A +E+H GAGGTESQDW +MLLRMYTR+ E+  
Sbjct: 61  ERIQALNEKMGTYELSMLLDEPYDRNNAIIELHPGAGGTESQDWGSMLLRMYTRFCEQHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           ++ E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+
Sbjct: 121 YQVETLDYQAGDEAGIKSVTLLIKGHNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D +I+IEI+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ
Sbjct: 181 DVMPELDGAIDIEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML+AKLY+LE++K+E+ A      + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQMEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L +K
Sbjct: 301 FETGNVQAVMDGDLDGFIDAYLKLK 325


>gi|153810056|ref|ZP_01962724.1| hypothetical protein RUMOBE_00437 [Ruminococcus obeum ATCC 29174]
 gi|149834234|gb|EDM89314.1| hypothetical protein RUMOBE_00437 [Ruminococcus obeum ATCC 29174]
          Length = 335

 Score =  258 bits (660), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 153/324 (47%), Positives = 216/324 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P  W N   ++  M+E + + + +     ++ ++ D   ++E+  EE+D  I+ E  
Sbjct: 1   MEAPDFWDNAEVSQQKMKELKSMKDDMEIYHSLETQMEDMETMIEMGYEENDPEIIPEIQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L   +   +  + ++LLSGE DS +A ++++AGAGGTE+ DW  ML RMY+RW +++ 
Sbjct: 61  EMLDEFQKNFDSIRVKTLLSGEYDSENAIIKLNAGAGGTEACDWCGMLYRMYSRWVDRKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L+  DG+EAG+KS T  + G NAYG+LK E+GVHRLVRISP+++  +R TSF S 
Sbjct: 121 FTMEVLDYLDGDEAGVKSVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +   +++EI++ D RIDTYR+SGAGGQH+N T SA+RITH PTG+VVQCQ ERSQ
Sbjct: 181 DVMPDIKKDLDVEINDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK +A  ML+AKLY L+ Q+ E   +      T+IGWG QIRSYV+QPY MVKD RT+
Sbjct: 241 HMNKDKAMQMLKAKLYLLKQQEAEAKLSGIRGEVTDIGWGNQIRSYVMQPYTMVKDHRTS 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  +   VLDGD+D F+ A L  
Sbjct: 301 EETGNVDAVLDGDIDPFINAYLKW 324


>gi|255283235|ref|ZP_05347790.1| peptide chain release factor 2 [Bryantella formatexigens DSM 14469]
 gi|255266308|gb|EET59513.1| peptide chain release factor 2 [Bryantella formatexigens DSM 14469]
          Length = 334

 Score =  258 bits (660), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 162/324 (50%), Positives = 218/324 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E+P  W +   ++  M+  + L + +     ++++  +   L+E+A EE+D S++ E  
Sbjct: 1   MEEPDFWDDPESSQESMKTLKALKDDVETYAVLKEQYEEIETLIEMAYEENDASLILEIQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L       E  +  +LLSGE D NDA + +HAGAGGTES DWA ML RMYTRWA+K+ 
Sbjct: 61  ETLDSFIATFENIRIRTLLSGEYDKNDAIVTLHAGAGGTESCDWAGMLYRMYTRWADKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  E L+  DGEEAGIKS T  ++G NAYG+LK E+GVHRLVRISP+++  +R TSF S 
Sbjct: 121 YTVEVLDYLDGEEAGIKSVTFEVRGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ ++IEI E D RIDTYR+SGAGGQH+N T SAVRITH+PT +VVQCQ ERSQ
Sbjct: 181 DVMPDIEEDLDIEIREEDLRIDTYRSSGAGGQHINKTSSAVRITHLPTNIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK +A  ML+AKLY L+ Q+  E  +       EIGWG QIRSYV+QPY MVKD RTN
Sbjct: 241 FQNKDKAMQMLKAKLYLLKQQENAEKVSGIRGEVKEIGWGNQIRSYVMQPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  +   V+DG++D F+ A L  
Sbjct: 301 AETGNVDSVMDGNIDLFINAYLKW 324


>gi|309777858|ref|ZP_07672804.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308914419|gb|EFP60213.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 327

 Score =  258 bits (660), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 147/324 (45%), Positives = 202/324 (62%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
            T     W +   A+ L+R+   + + +   +++   L       +L  E+ D  I +  
Sbjct: 1   MTLQDDFWSDPQHAQTLIRQLNGIKDIVESYEKLNSALEGLEETHDLLKEDYDDEIFELF 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
                 ++   +  + + LLS E D + A LE+H GAGGTES DWA+ML RMY+RWAEK+
Sbjct: 61  EAEYMEMEKNFDDFEIKILLSHEYDHSSAILELHPGAGGTESCDWADMLYRMYSRWAEKK 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK   L+   GEEAGIKS T L++G  AYG+LK E+GVHRLVRISP+DS  RRHTSF+S
Sbjct: 121 GFKVSVLDYLPGEEAGIKSVTFLVEGDMAYGYLKAEKGVHRLVRISPFDSGGRRHTSFAS 180

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P  +D IEIEI   D  ++T RASGAGGQH+N TDSAVR+ H PTG+V  CQ  RS
Sbjct: 181 LDVMPQFNDEIEIEIKPEDLIVETKRASGAGGQHINKTDSAVRMVHKPTGLVATCQNGRS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QH+N+ +A  +L+++LY+  ++++E      +  +    WG QIRSYV  PY MVKD RT
Sbjct: 241 QHENREEALRVLKSRLYQKMIEEQEAKLAEIKGEQKANEWGSQIRSYVFHPYSMVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
           + E +    V+DGDLD F+ A L 
Sbjct: 301 SCETSDVQGVMDGDLDAFIFAYLK 324


>gi|229823414|ref|ZP_04449483.1| hypothetical protein GCWU000282_00712 [Catonella morbi ATCC 51271]
 gi|229787189|gb|EEP23303.1| hypothetical protein GCWU000282_00712 [Catonella morbi ATCC 51271]
          Length = 331

 Score =  258 bits (660), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 165/325 (50%), Positives = 224/325 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +  +A+ ++ +        S I  +++ + D  + LEL  E +D  IL E  
Sbjct: 1   MSAPDFWDDNEKAQKIISQLNLAKETYSTIHALEEGVADIEVALELYDESEDADILAEAE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             + +++ +++  + + LLSG  D+N+A LE+H GAGGTESQDW +MLLRMY RWA+K+ 
Sbjct: 61  GQVAQVQADLDAYEMKLLLSGPHDANNAILEIHPGAGGTESQDWGSMLLRMYQRWADKQG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK   L+  DGEEAGIKS TL I+G NAYG+LK E+GVHRLVRISP+DSNSRRHTSF+S+
Sbjct: 121 FKVTVLDYQDGEEAGIKSVTLEIEGHNAYGYLKSEKGVHRLVRISPFDSNSRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P++DD+IEI+I+  D RIDTYRASGAGGQH+N T SA+RITHIPTG+V Q Q +RSQ
Sbjct: 181 EVTPMLDDTIEIDINPDDLRIDTYRASGAGGQHINKTSSAIRITHIPTGIVTQSQSQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A  ML+AKLY+LE + + +     +  + +I WG QIRSYV  PY MVKD RT+
Sbjct: 241 FQNRDLAMAMLKAKLYQLEEENKAKELAALKGEQKDIAWGSQIRSYVFHPYAMVKDHRTS 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDL+ F+ A L  +
Sbjct: 301 YEVGNTGAVMDGDLNGFIDAYLKWQ 325


>gi|16804547|ref|NP_466032.1| peptide chain release factor 2 [Listeria monocytogenes EGD-e]
 gi|16411997|emb|CAD00587.1| prfB [Listeria monocytogenes EGD-e]
          Length = 327

 Score =  258 bits (660), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 167/325 (51%), Positives = 215/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP+ W +   A+ ++ E             +++      I LEL  EE D  + +E  
Sbjct: 1   MLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ 
Sbjct: 61  KDIKAYMATISAFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+
Sbjct: 121 FKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D  IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ
Sbjct: 181 DVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLDDF+ A L  +
Sbjct: 301 YETGNIQAVMDGDLDDFINAYLRSR 325


>gi|183603302|ref|ZP_02711260.2| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC1087-00]
 gi|183603790|ref|ZP_02721350.2| peptide chain release factor 2 [Streptococcus pneumoniae MLV-016]
 gi|194397508|ref|YP_002037401.1| peptide chain release factor 2 [Streptococcus pneumoniae G54]
 gi|225856431|ref|YP_002737942.1| peptide chain release factor 2 [Streptococcus pneumoniae P1031]
 gi|225858565|ref|YP_002740075.1| peptide chain release factor 2 [Streptococcus pneumoniae 70585]
 gi|225860729|ref|YP_002742238.1| peptide chain release factor 2 [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298229611|ref|ZP_06963292.1| peptide chain release factor 2 [Streptococcus pneumoniae str.
           Canada MDR_19F]
 gi|298255815|ref|ZP_06979401.1| peptide chain release factor 2 [Streptococcus pneumoniae str.
           Canada MDR_19A]
 gi|307067358|ref|YP_003876324.1| protein chain release factor B [Streptococcus pneumoniae AP200]
 gi|183570249|gb|EDT90777.1| peptide chain release factor 2 [Streptococcus pneumoniae
           CDC1087-00]
 gi|183578420|gb|EDT98948.1| peptide chain release factor 2 [Streptococcus pneumoniae MLV-016]
 gi|194357175|gb|ACF55623.1| peptide chain release factor 2 [Streptococcus pneumoniae G54]
 gi|225721230|gb|ACO17084.1| peptide chain release factor 2 [Streptococcus pneumoniae 70585]
 gi|225726237|gb|ACO22089.1| peptide chain release factor 2 [Streptococcus pneumoniae P1031]
 gi|225727373|gb|ACO23224.1| peptide chain release factor 2 [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|306408895|gb|ADM84322.1| Protein chain release factor B [Streptococcus pneumoniae AP200]
          Length = 329

 Score =  258 bits (660), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 150/328 (45%), Positives = 204/328 (62%), Gaps = 2/328 (0%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             K  +P  W + I A+   +E   L N  +   ++++   +  ILL+   E++      
Sbjct: 2   ENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHDEL 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
                       +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+  
Sbjct: 62  VAQLAELD--KIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGN 119

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF
Sbjct: 120 AKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSF 179

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S+ V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +
Sbjct: 180 TSVEVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVD 239

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           R+Q+ N+ +A  ML+AKLY++E  K+    +  +  K EI WG QIRSYV  PY MVKD 
Sbjct: 240 RTQYGNRDRAMKMLQAKLYQMEQDKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDH 299

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           RT+ E      V+DGDLD F+ A L  +
Sbjct: 300 RTSFEVAQVDKVMDGDLDGFIDAYLKWR 327


>gi|290959957|ref|YP_003491139.1| peptide chain release factor 2 [Streptomyces scabiei 87.22]
 gi|260649483|emb|CBG72598.1| peptide chain release factor 2 [Streptomyces scabiei 87.22]
          Length = 368

 Score =  258 bits (660), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 158/355 (44%), Positives = 223/355 (62%), Gaps = 5/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW N  EA+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDKLRADIAVLEEQAAVPSLWDNPDEAQKITSKLSHLQAEVRKAEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD     E    L  ++  ++  +  +LLSGE DS +A + + 
Sbjct: 73  RGRIDDLGVLFEMAEEEDDPDTRAEAESELASVRKALDEMEVRTLLSGEYDSREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE++ +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQKGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL +   ++R+E     ++ 
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLD---RRRQEEQARMDAL 309

Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K + G  WG Q+RSYVL PYQMVKDLRT  E  +P  V +G+++ F++A +  +K
Sbjct: 310 KGDGGNSWGNQMRSYVLHPYQMVKDLRTEYEVGNPEAVFNGEIEGFLEAGIRWRK 364


>gi|51473471|ref|YP_067228.1| peptide chain release factor 2 [Rickettsia typhi str. Wilmington]
 gi|51459783|gb|AAU03746.1| peptide chain release factor 2 (RF-2) [Rickettsia typhi str.
           Wilmington]
          Length = 340

 Score =  258 bits (660), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 173/332 (52%), Positives = 236/332 (71%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL+ L   T DP LW N   A++L+RE+ +++  ++    ++    D L L  +A  E+D
Sbjct: 2   RLTELEELTADPSLWNNNANAQILLREKTNIEEKLNVFNNLKSNFEDILELEAMAEVEND 61

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
              L +   + +++ +     + E L S E+D N+ +LE++AGAGGTES DWA++++RMY
Sbjct: 62  FETLNQIEQDFKKLSIIAAKLETECLFSDESDYNNCFLEINAGAGGTESHDWASIMMRMY 121

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            R+AE+  FKT+ + + +GEE GIKS T+ I G  AYGW K E GVHRLVRISP+++  +
Sbjct: 122 LRFAERLGFKTQIINMINGEEVGIKSCTIRIIGKRAYGWFKTEAGVHRLVRISPFNAAGK 181

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           R TSF+S WVYP +DD I I I + D RIDT+RASGAGGQHVNTTDSAVRITHIPT  V 
Sbjct: 182 RMTSFASSWVYPEIDDDIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITHIPTNTVT 241

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
           QCQ +RSQHKNKAQA  ML+AKLY+LE+QKR +  +   ++KT+  WG QIRSYVLQPYQ
Sbjct: 242 QCQSDRSQHKNKAQAMKMLQAKLYKLEMQKRTDSVDKQNANKTDNSWGHQIRSYVLQPYQ 301

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +VKDLRT+ E +    VLDG+L++F+ A+LA+
Sbjct: 302 IVKDLRTDYETSDTKGVLDGNLENFVSASLAM 333


>gi|254900353|ref|ZP_05260277.1| peptide chain release factor 2 [Listeria monocytogenes J0161]
          Length = 327

 Score =  258 bits (660), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 167/325 (51%), Positives = 215/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP+ W +   A+ ++ E             +++      I LEL  EE D  + +E  
Sbjct: 1   MLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ 
Sbjct: 61  KDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+
Sbjct: 121 FKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D  IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ
Sbjct: 181 DVMPELDGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLDDF+ A L  +
Sbjct: 301 YETGNIQAVMDGDLDDFINAYLRSR 325


>gi|190891331|ref|YP_001977873.1| peptide chain release factor 2 (rf-2) protein [Rhizobium etli CIAT
           652]
 gi|190696610|gb|ACE90695.1| peptide chain release factor 2 (rf-2) protein [Rhizobium etli CIAT
           652]
          Length = 342

 Score =  258 bits (660), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 235/328 (71%), Positives = 280/328 (85%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
           N K EDP+LW +  EA+ LMRERQ LD+ I+ +++++ +L DN+ L+EL  EE D  +++
Sbjct: 2   NNKAEDPNLWNDAAEAQKLMRERQQLDDGINGVRQLEQQLKDNVELIELGEEEGDGGVVK 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E  D L+ +K E   +Q E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWAE
Sbjct: 62  EAEDALKALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWAE 121

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           +++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSF
Sbjct: 122 RQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSF 181

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           SSIWVYPVVDDSI IEI+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VV CQQE
Sbjct: 182 SSIWVYPVVDDSINIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVACQQE 241

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQHKN+A+AW MLRA++YE EL+KREE AN   +SKT+IGWG QIRSYVLQPYQ+VKDL
Sbjct: 242 RSQHKNRAKAWEMLRARMYEAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKDL 301

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           RT +  T+P DVLDGDL++FM+A LA +
Sbjct: 302 RTGVASTAPDDVLDGDLNEFMEAALAHR 329


>gi|291528563|emb|CBK94149.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium
           rectale M104/1]
          Length = 330

 Score =  258 bits (660), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 152/324 (46%), Positives = 218/324 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P  W +  +++  M+E + + + ++   +++++  D   ++E+  EE+D S++ E  
Sbjct: 1   MEAPDFWDDPEKSQSKMKELKSMKDDVATYAKLKEQYEDIETMIEMGYEENDESLIPEIQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L   +   +  + ++LLSGE D  +A L ++AGAGGTES DWA+ML RMY++WA+K+ 
Sbjct: 61  QMLDDFESTYDGIRMKTLLSGEYDKCNAILRLNAGAGGTESCDWASMLFRMYSKWADKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L+  DG+EAGIKS T  + G NAYG+LK E+GVHRLVRISP+++  +R TSF S 
Sbjct: 121 FTLEVLDSLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ ++IE+ + D RIDTYR+SGAGGQH+N T SA+RITH P+G+VVQCQ ERSQ
Sbjct: 181 DVMPDIEEDLDIEVKDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK +A  ML+AKLY L+ ++             EIGWG QIRSYVLQPY MVKD RT+
Sbjct: 241 HMNKDKAMQMLKAKLYLLKQEENAAKEAGIRGEVKEIGWGSQIRSYVLQPYTMVKDHRTD 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
           +E  +   VLDG++D F+   L  
Sbjct: 301 VETGNADAVLDGNIDIFINGYLKW 324


>gi|167772028|ref|ZP_02444081.1| hypothetical protein ANACOL_03402 [Anaerotruncus colihominis DSM
           17241]
 gi|167665826|gb|EDS09956.1| hypothetical protein ANACOL_03402 [Anaerotruncus colihominis DSM
           17241]
          Length = 374

 Score =  258 bits (660), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 156/359 (43%), Positives = 226/359 (62%), Gaps = 7/359 (1%)

Query: 2   KLSRQLNCLGGLFD-------WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN 54
           +L  +L       D       +D   ++L+ L  +T  P  W +V  ++    E   +  
Sbjct: 6   ELRLRLEAHRAELDEFAQAIGYDALRRKLAELEEQTTAPGFWNDVERSQKNQLETARVRG 65

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
            +    ++     D L L+ LA EE+D S+  E   +++R + ++E ++  +LL+GE D+
Sbjct: 66  KLEACDKLNALYDDTLTLIGLADEENDESVYSEALADVERFESDLETQKLSTLLTGEYDA 125

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
           N+A +  HAGAGGTE+QDWA ML RMYTRWAE+  F  + L+  DG+EAG+KSA++LI G
Sbjct: 126 NNAIMTFHAGAGGTEAQDWAQMLYRMYTRWAERHGFTYKILDYLDGDEAGLKSASILITG 185

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
            NAYG+L+ E GVHRLVR+SP+D++ RRHTSF+S+ V P + D   +EI+  D ++D +R
Sbjct: 186 DNAYGFLRSEAGVHRLVRVSPFDASGRRHTSFASVEVLPELPDDHSVEINPEDIKMDVFR 245

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +SGAGGQH+N T SAVR+THIPTG+VV CQ ERSQ +N+     ML AKL E++ ++   
Sbjct: 246 SSGAGGQHINKTSSAVRLTHIPTGIVVSCQNERSQFQNREMCMKMLTAKLVEIKEREHLA 305

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             N  +  + +I WG QIRSYV  PY + KD RT  E  + + V+DGDLD F+ A L  
Sbjct: 306 NINEIKGEQMQIAWGSQIRSYVFMPYTLAKDHRTGFESGNINAVMDGDLDGFINAYLKA 364


>gi|116251510|ref|YP_767348.1| peptide chain release factor 2 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115256158|emb|CAK07239.1| putative peptide chain release factor 2 (rf-2) [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 342

 Score =  258 bits (660), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 237/328 (72%), Positives = 284/328 (86%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
           N K EDP+LW +  EA+ LMRERQ LD+ I+ +K+++ +L DN+ L+EL  EE D S+++
Sbjct: 2   NNKAEDPNLWNDASEAQKLMRERQQLDDGINGVKQLEQQLNDNIELIELGEEEGDQSVVK 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E  D L+ +K E   +Q E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWAE
Sbjct: 62  EAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWAE 121

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           +++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSF
Sbjct: 122 RQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSF 181

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           SSIWVYPVVDDSI+IEI+ESDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VVQCQQE
Sbjct: 182 SSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQE 241

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQHKN+A+AW+MLRA++YE EL+KRE+ A+   +SKTEIGWG QIRSYVLQPYQMVKDL
Sbjct: 242 RSQHKNRAKAWDMLRARMYEAELKKREDAASAEAASKTEIGWGHQIRSYVLQPYQMVKDL 301

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           RT +  ++P DVLDGDL++FM+A LA +
Sbjct: 302 RTGVASSAPDDVLDGDLNEFMEAALAHR 329


>gi|296129092|ref|YP_003636342.1| peptide chain release factor 2 [Cellulomonas flavigena DSM 20109]
 gi|296020907|gb|ADG74143.1| peptide chain release factor 2 [Cellulomonas flavigena DSM 20109]
          Length = 371

 Score =  258 bits (659), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 144/354 (40%), Positives = 219/354 (61%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D      +++ L+ +   P+LW +   A+ +        + +  + +
Sbjct: 12  QLRTTLESIETVSDPTALRAKIAELSEQASVPNLWDDPEAAQKVTSALSSAQSELERVDK 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ R+ D   L+E+A EEDD   L E    L  I+ ++   +  +LL+GE D  DA + +
Sbjct: 72  LRGRIDDLETLVEMAAEEDDADTLAEAEAELVGIRKDLGELEIRTLLAGEYDVRDAVVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG ++ D+A MLLRMY RWAE+  + T  L+    EEAG+KSAT  +K P A+G L
Sbjct: 132 RAGAGGVDAADFAEMLLRMYLRWAERHGYATSVLDTSYAEEAGLKSATFEVKAPYAFGHL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+++ +  +EI ES+ ++D +R+SG GGQ
Sbjct: 192 SVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDSVEIPESEIKVDVFRSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  +  ++          
Sbjct: 252 SVNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLVRQEEERAAKKELAG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +  WG Q+RSYVLQPYQMVKDLRT  E  +P+ V DGD+DDF++A +  ++
Sbjct: 312 D-IKASWGDQMRSYVLQPYQMVKDLRTEHEVGNPASVFDGDIDDFIEAGVRWRR 364


>gi|255323776|ref|ZP_05364902.1| peptide chain release factor 2 [Corynebacterium tuberculostearicum
           SK141]
 gi|255298956|gb|EET78247.1| peptide chain release factor 2 [Corynebacterium tuberculostearicum
           SK141]
          Length = 367

 Score =  258 bits (659), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 152/353 (43%), Positives = 216/353 (61%), Gaps = 4/353 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +    R+  L  +  DP LW +   A+ +  E       +  ++ 
Sbjct: 11  QLETTLTTIEKVMDPEALAARIRELEAQAGDPSLWDDPAHAQKVTSELSAAQAKVRKLES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  ++ EL    ++        D L  ++  +E  +  ++LSGE D  +A + +
Sbjct: 71  LRGRLEDMPVMYEL---AEEEGDTSLADDELDSLESAIESLEVTTMLSGEYDPREAVINI 127

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMYTRWAEK   K +  +I   EEAGIKSAT ++ G   YG L
Sbjct: 128 RSGAGGVDAADWAEMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I ++D R+D YR+SG GGQ
Sbjct: 188 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDHIDIPDNDVRVDVYRSSGPGGQ 247

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E + Q+ +   +   +
Sbjct: 248 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEEQAELDALGA 307

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                 WG Q+RSYVL PYQMVKDLRTN E   PS VLDGD+D F+++ +  +
Sbjct: 308 G-GNASWGNQMRSYVLHPYQMVKDLRTNFEVGDPSKVLDGDIDGFLESGIRWR 359


>gi|16801714|ref|NP_471982.1| peptide chain release factor 2 [Listeria innocua Clip11262]
 gi|16415189|emb|CAC97879.1| prfB [Listeria innocua Clip11262]
          Length = 327

 Score =  258 bits (659), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 168/325 (51%), Positives = 215/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP+ W +   A+ ++ E             +++      I LEL  EE D  +  E  
Sbjct: 1   MLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQAELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ 
Sbjct: 61  KDIKAYVATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+
Sbjct: 121 FKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ
Sbjct: 181 DVMPELDDEIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLDDF+ A L  +
Sbjct: 301 YETGNIQAVMDGDLDDFINAYLRSR 325


>gi|239636633|ref|ZP_04677635.1| peptide chain release factor 2 [Staphylococcus warneri L37603]
 gi|239597988|gb|EEQ80483.1| peptide chain release factor 2 [Staphylococcus warneri L37603]
          Length = 330

 Score =  258 bits (659), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 161/327 (49%), Positives = 221/327 (67%), Gaps = 1/327 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              +P+ W +   A+ ++ +   L + ++   E+++ + D    +EL  EE D  + QE 
Sbjct: 1   MMTEPNFWDDQNRAQDIIDKNNALKSMVNGYYELEESVEDMSATVELLQEEFDEDMKQEL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            +N+   K E+++ + + LL G  D+N+A LE+H GAGGTESQDW +MLLRMY R+ E+ 
Sbjct: 61  ENNVVEFKAEIDHFELQLLLDGPYDANNAILELHPGAGGTESQDWVSMLLRMYQRYCEQS 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E ++   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S
Sbjct: 121 GFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180

Query: 209 IWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
             V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ER
Sbjct: 181 CDVIPDFDNDEIEIEINSDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KN+  A  ML++KLY+L+L+++E         + EIGWG QIRSYV  PY MVKD R
Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354
           TN E      V+DGD+  F++A L  +
Sbjct: 301 TNEETGKVDAVMDGDIGPFIEAYLRHQ 327


>gi|169630559|ref|YP_001704208.1| peptide chain release factor 2 [Mycobacterium abscessus ATCC 19977]
 gi|238688912|sp|B1MEU8|RF2_MYCA9 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|169242526|emb|CAM63554.1| Peptide chain release factor 2 (PrfB) [Mycobacterium abscessus]
          Length = 367

 Score =  258 bits (659), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 161/354 (45%), Positives = 224/354 (63%), Gaps = 5/354 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R+  L     DP+LW +    + +  +  H    +  ++E+
Sbjct: 12  LDTTLTTVERVLDVDGLRARIKTLEEAAADPNLWDDQARGQQVTSQLSHAQGELRRVEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L ELA E +D S++ E      +++ ++E  +  +LLSGE D  +A + + 
Sbjct: 72  RSRLDDLPVLYELAEESEDNSVVAEADAERVKLREDIEAMEVRTLLSGEYDEREAVVTIR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ DWA ML+RMY RWAE  K+  E  +    EEAGIKSAT  +  P AYG L 
Sbjct: 132 SGAGGVDAADWAEMLMRMYIRWAEAHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG GGQ 
Sbjct: 192 VEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDIPEGDLRVDVYRSSGPGGQS 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+A+L E   +KR+E     ++ 
Sbjct: 252 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQARLLE---RKRQEERAEMDAL 308

Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K + G  WG Q+RSYVLQPYQMVKDLRT  E  +P+ VLDGD+D F++A +  +
Sbjct: 309 KGDGGSSWGTQMRSYVLQPYQMVKDLRTEYEVGNPAAVLDGDIDGFIEAGIRWR 362


>gi|309810763|ref|ZP_07704570.1| peptide chain release factor 2 [Dermacoccus sp. Ellin185]
 gi|308435300|gb|EFP59125.1| peptide chain release factor 2 [Dermacoccus sp. Ellin185]
          Length = 370

 Score =  258 bits (659), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 136/353 (38%), Positives = 213/353 (60%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   +  +  + D +   +++  L  ++  P LW +   A+ +       +     ++ +
Sbjct: 12  LRTTMASVREVLDLEKLKKQIVDLEEQSAAPDLWDDPDAAQKITSALSRANAENDRVENM 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + D  +L+E+  EE+D   L E    L++++  V   +  +LL+GE D  +A + + 
Sbjct: 72  DAAIDDLEVLVEMGTEENDADTLAEAERELKKLQKAVGELEVRTLLNGEFDEREAVVTIR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A ML+RMY RWAE+  + T+ ++    EEAG+KS T  +  P A+G L 
Sbjct: 132 AGAGGVDAADFAEMLMRMYLRWAERHGYPTKVMDTSYAEEAGLKSVTFEVNVPYAFGNLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI E++ +ID +R+SG GGQ 
Sbjct: 192 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIETTDTIEIPENELKIDVFRSSGPGGQS 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG VV  Q E+SQ +N+A A  +++++L  L+ Q+ +         
Sbjct: 252 VNTTDSAVRMTHIPTGTVVSMQNEKSQIQNRAAALRVMQSRLLLLKKQEEDAQKKELAGD 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +  WG Q+RSYVL PYQMVKDLRT  E  + S V DGD+D F++A +  K+
Sbjct: 312 -IKASWGDQMRSYVLHPYQMVKDLRTEYEVGNTSGVFDGDIDGFIEAGIRWKR 363


>gi|257886811|ref|ZP_05666464.1| peptide chain release factor 2 [Enterococcus faecium 1,141,733]
 gi|257822865|gb|EEV49797.1| peptide chain release factor 2 [Enterococcus faecium 1,141,733]
          Length = 327

 Score =  258 bits (659), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 161/324 (49%), Positives = 218/324 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W +   A+ ++ E             + + L +  +++++  EE D  + +E  
Sbjct: 1   MAEPGFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVDMLQEEPDAVMQEEAE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             +  +  ++   +   LL G  D N+A +E+H GAGGTESQDW +MLLRMYTRWAE+  
Sbjct: 61  TRINALDEKMNTYELSMLLDGPYDRNNAIVELHPGAGGTESQDWGSMLLRMYTRWAEQHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           ++ E L+   G+EAGIKS TLLIKG NA+G+LK E+GVHRLVRISP+DS  RRHTSF S+
Sbjct: 121 YQVETLDYQAGDEAGIKSVTLLIKGHNAFGYLKAEKGVHRLVRISPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D++I+IEI+  D +IDTYRASGAGGQH+N T+SAVRITH+PTG VV  Q +RSQ
Sbjct: 181 DVMPELDETIDIEINPDDLKIDTYRASGAGGQHINKTESAVRITHLPTGTVVASQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML+AKLY+LE++K+E+ A      + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
           +E  +   V+DGDLD F+   L +
Sbjct: 301 VETGNVQAVMDGDLDLFIDGYLKM 324


>gi|111023366|ref|YP_706338.1| peptide chain release factor 2 [Rhodococcus jostii RHA1]
 gi|123339715|sp|Q0S2Q6|RF2_RHOSR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|110822896|gb|ABG98180.1| peptide chain release factor RF2 [Rhodococcus jostii RHA1]
          Length = 368

 Score =  258 bits (659), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 153/355 (43%), Positives = 223/355 (62%), Gaps = 6/355 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +   +R+  L  +  DP LW +   A+ +  +  H    +  ++E
Sbjct: 11  ELDTTLRTVESVLDVEELRRRIDELEHQAADPELWNDQEHAQQVTSQLSHSQAELRRVEE 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  +L ELA + +    + +       ++ ++   + +++LSGE D  DA + +
Sbjct: 71  LRTRLDDMPVLYELAED-EGADAIADADAERHSLREDIAAMEVKTMLSGEYDERDALVNI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMY RWAEK  +  E  +    EEAGIKSAT  +K P +YG L
Sbjct: 130 RSGAGGVDAADWAEMLMRMYVRWAEKHGYGVEVYDTSYAEEAGIKSATFAVKAPYSYGTL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+ + V PVV+ +  I+++E+D R+D YR+SG GGQ
Sbjct: 190 SVEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIDVNENDVRVDVYRSSGPGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL E+   KR+E     ++
Sbjct: 250 SVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLEV---KRKEERAEMDA 306

Query: 302 SKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K + G  WG Q+RSYVL PYQMVKDLRT  E  +PS VLDGD+D F+++ +  +
Sbjct: 307 LKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVNNPSAVLDGDIDGFLESGIRWR 361


>gi|331003438|ref|ZP_08326937.1| peptide chain release factor 2 [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330412484|gb|EGG91873.1| peptide chain release factor 2 [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 337

 Score =  258 bits (659), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 156/325 (48%), Positives = 219/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E+P  W +  E+  ++RE + L + +    +++    D  +L+E+  EE+D S++ E  
Sbjct: 1   MEEPTFWDDPKESTKIVREAKQLKDTVEKYNKLKSEYEDIGVLIEMGYEENDESLIPEIE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L+    E++  +  +LL+GE D   A ++++AGAGGTES DW +ML RMYTRWA K  
Sbjct: 61  AMLEEFTKEIDALKIATLLTGEYDDASAIMKLNAGAGGTESCDWCSMLYRMYTRWAAKEG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  + L+I DG+EAGIKS TL I G NAYG+L+ E GVHRLVRISP+++  +R TSF S 
Sbjct: 121 YTVDVLDILDGDEAGIKSVTLQINGLNAYGYLRSEHGVHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + P +++ ++++I+  D RIDTYR+SGAGGQH+N T SA+RITHIPTGVVVQCQ ERSQ
Sbjct: 181 DIMPDIEEDLDVDINPDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGVVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK +A  ML+AKL+ L+ Q   E  +       +IGWG QIRSYV+QPY MVKD RT 
Sbjct: 241 FQNKDKAMQMLKAKLFMLKQQANVEKLSDIRGDVKDIGWGNQIRSYVMQPYTMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  + S V+DGD+D F+ A L  +
Sbjct: 301 AESGNVSAVMDGDIDKFIIAYLTWQ 325


>gi|220910508|ref|YP_002485819.1| peptide chain release factor 2 [Cyanothece sp. PCC 7425]
 gi|219867119|gb|ACL47458.1| peptide chain release factor 2 [Cyanothece sp. PCC 7425]
          Length = 361

 Score =  258 bits (659), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 149/344 (43%), Positives = 221/344 (64%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      ++S L      P+ W +   A++ ++E   L + +  +   Q  L D +
Sbjct: 12  RTIFDVPALQAKISDLEQVAAQPNFWDDQATAQVTLQELNELKSHLEQLHRWQATLSDAV 71

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             LEL   E D S+LQE SDNL+++  ++   + E LLSG  D N A L ++AGAGGT++
Sbjct: 72  AALELVELEPDESLLQEASDNLKQLDQQLSQWELEQLLSGTYDRNGAVLTINAGAGGTDA 131

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRWAE+  +K    E+ +G+EAGIKSATL I G  AYG+L+ E+G HRL
Sbjct: 132 QDWAEMLLRMYTRWAEQHGYKVHLAELSEGDEAGIKSATLEIDGRYAYGYLRSEKGTHRL 191

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+++N +R TSF+ + V P +D S+++EI + D  I T R+ G GGQ+VN  ++AV
Sbjct: 192 VRISPFNANGKRQTSFAGVEVMPQLDHSVQLEIPDKDLEITTSRSGGKGGQNVNKVETAV 251

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI H+PTG+ V+C QERSQ +NK +A  +L+AKL  +  +++ +          E  WG 
Sbjct: 252 RIVHLPTGLAVRCTQERSQLQNKEKALAILKAKLLIIAQEQKAQEIADIRGDAVEAAWGT 311

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           QIR+YV  PY++VKD+RT +E  +   V++G+LD+F++A L  +
Sbjct: 312 QIRNYVFDPYKLVKDVRTGVETQAIEVVMNGELDEFIQAYLRQE 355


>gi|302671676|ref|YP_003831636.1| peptide chain release factor 2 PrfB [Butyrivibrio proteoclasticus
           B316]
 gi|302396149|gb|ADL35054.1| peptide chain release factor 2 PrfB [Butyrivibrio proteoclasticus
           B316]
          Length = 380

 Score =  258 bits (659), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 155/353 (43%), Positives = 222/353 (62%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +    D     + +  L+ + E+P  W N  +A    ++ +++ + ++ I+ +
Sbjct: 14  LKGTLDEVTASLDLGTKKKIIEELSREMEEPGFWDNAEKANKKTKDLKNMQDLVADIERL 73

Query: 63  QDRLCDNLILLELALEE--DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
             +  D + L+++   E  DD  +  E    L   + ++E  +  +LL+   D  D  L 
Sbjct: 74  NSQYTDIIDLIDMQNAEGVDDDDMAAEIRSELDEFEEKLENIRISNLLNQPYDKYDVILR 133

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           ++AGAGGTE+ DWA+ML RMYTRWAE++ F TE L++ DG+EAGIKS T  I G NAYG 
Sbjct: 134 LNAGAGGTEACDWASMLYRMYTRWAERKGFTTEVLDLLDGDEAGIKSVTFQISGTNAYGL 193

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E GVHRLVRISP+++ ++R TSF S  V P +++ ++IEI+  D RIDTYR+SGAGG
Sbjct: 194 LKSEHGVHRLVRISPFNAQAKRQTSFVSCDVMPDIEEDLDIEINPDDLRIDTYRSSGAGG 253

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QH+N T SAVRITHIPTGVVV CQ ERSQ +NK +A  ML+AKL+ ++ +++        
Sbjct: 254 QHINKTSSAVRITHIPTGVVVACQNERSQFQNKDKAMQMLKAKLFIMKQEEQAAKLAGIR 313

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
               +  WG QIRSYVLQPY MV D RT  + ++   VLDG+LD F+ A L  
Sbjct: 314 GEVMDNAWGSQIRSYVLQPYTMVNDTRTGFKASNADGVLDGELDPFINAYLKW 366


>gi|322372865|ref|ZP_08047401.1| peptide chain release factor 2 [Streptococcus sp. C150]
 gi|321277907|gb|EFX54976.1| peptide chain release factor 2 [Streptococcus sp. C150]
          Length = 337

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 150/336 (44%), Positives = 214/336 (63%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L  +  +P  W + I A+   +E   L         +Q+   +    L L + 
Sbjct: 1   MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMQELSDETE--LYLEML 58

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E+D S+ +E  + L+++   +   +   LLS   D N+A LE+H G+GGTE+QDWA+MLL
Sbjct: 59  EEDSSVQEELEETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLL 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY R+   + FK E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS
Sbjct: 119 RMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSF+S+ V P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIPTG
Sbjct: 179 AKRRHTSFTSVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY++E +K+ E  N  +  K EI WG QIRSYV  
Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RT  E      V+DGD++ F+ A L  +
Sbjct: 299 PYTMVKDHRTGYEVAQVDKVMDGDIEGFIDAYLKWR 334


>gi|238923127|ref|YP_002936640.1| peptide chain release factor 2 in translation [Eubacterium rectale
           ATCC 33656]
 gi|238874799|gb|ACR74506.1| peptide chain release factor 2 in translation [Eubacterium rectale
           ATCC 33656]
          Length = 330

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 152/324 (46%), Positives = 218/324 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P  W +  +++  M+E + + + ++   +++++  D   ++E+  EE+D S++ E  
Sbjct: 1   MEAPDFWDDPEKSQSKMKELKSMKDDVATYAKLKEQYEDIETMIEMGYEENDESLIPEIQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L   +   +  + ++LLSGE D  +A L ++AGAGGTES DWA+ML RMY++WA+K+ 
Sbjct: 61  QMLDDFESTYDGIRMKTLLSGEYDKCNAILRLNAGAGGTESCDWASMLFRMYSKWADKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L+  DG+EAGIKS T  + G NAYG+LK E+GVHRLVRISP+++  +R TSF S 
Sbjct: 121 FTLEVLDSLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ ++IE+ + D RIDTYR+SGAGGQH+N T SA+RITH P+G+VVQCQ ERSQ
Sbjct: 181 DVMPDIEEDLDIEVKDEDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK +A  ML+AKLY L+ ++             EIGWG QIRSYVLQPY MVKD RT+
Sbjct: 241 HMNKDKAMQMLKAKLYLLKQEENAAKEAGIRGEVKEIGWGSQIRSYVLQPYTMVKDHRTD 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
           +E  +   VLDG++D F+   L  
Sbjct: 301 VETGNADAVLDGNIDIFINGYLKW 324


>gi|119960719|ref|YP_948373.1| peptide chain release factor 2 [Arthrobacter aurescens TC1]
 gi|119947578|gb|ABM06489.1| peptide chain release factor 2 [Arthrobacter aurescens TC1]
          Length = 398

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 140/352 (39%), Positives = 217/352 (61%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L    + +  + D D     ++ L+ +   P LW +   A+++     H  + +  + ++
Sbjct: 39  LRATYSSIENVTDVDALKTEIAELSEQAGAPDLWDDPASAQVITSRLSHRQSEVERLSKL 98

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             R+ D  +L+EL  +E D   + E +  L  I+  +   +  +LLSGE D  +A + + 
Sbjct: 99  ASRIDDLEVLVELGQDEGDEDSMAEAAKELSSIRKALAELEITTLLSGEYDEREAVVTIR 158

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A ML+RMY RWAE+  + T  ++    EEAG+KSAT  +K P A+G L 
Sbjct: 159 AGAGGVDAADFAEMLMRMYLRWAERHGYPTTVMDTSYAEEAGLKSATFEVKAPYAFGTLS 218

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI +++ R+D +R+SG GGQ 
Sbjct: 219 VEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDSIEIPDNEIRVDVFRSSGPGGQS 278

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  ++ ++++         
Sbjct: 279 VNTTDSAVRLTHIPTGIVVSMQNEKSQLQNRAAAMRVLQSRLLLVKKEQQDAEKKALAGD 338

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  WG Q+RSYVL PYQMVKDLRT  E  + S VLDGD+DDF+ A +  +
Sbjct: 339 -VKASWGDQMRSYVLNPYQMVKDLRTEHEVGNTSAVLDGDIDDFIDAGIRWR 389


>gi|295109041|emb|CBL22994.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus
           obeum A2-162]
          Length = 334

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 151/324 (46%), Positives = 216/324 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P  W +   ++  M+E + + + +     ++ ++ D   ++E+  EE+D  I+ E  
Sbjct: 1   MEAPDFWDDAEVSQKKMKELKSMKDDMEIYHSLESQMEDMETMIEMGYEENDPEIIPEIQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L   +   +  + ++LLSGE DS +A ++++AGAGGTE+ DW  ML RMY+RW +++ 
Sbjct: 61  EMLDEFEKNFDSIRVKTLLSGEYDSENAIIKLNAGAGGTEACDWCGMLYRMYSRWVDRKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L+  DG+EAGIKS T  + G NAYG+LK E+GVHRLVRISP+++  +R TSF S 
Sbjct: 121 FTMEVLDYLDGDEAGIKSVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +   +++EI++ D RIDTYR+SGAGGQH+N T SA+RITH PTG+VVQCQ ERSQ
Sbjct: 181 DVMPDIKKDLDVEINDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK +A  ML+AKL+ L+ Q+ E   +      T+IGWG QIRSYV+QPY MVKD RT+
Sbjct: 241 HMNKDKAMQMLKAKLFLLKQQEAEAKLSGIRGEVTDIGWGNQIRSYVMQPYTMVKDHRTS 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  +   VLDG++D F+ A L  
Sbjct: 301 EETGNVDAVLDGEIDPFINAYLKW 324


>gi|227545120|ref|ZP_03975169.1| peptide chain release factor RF2 [Lactobacillus reuteri CF48-3A]
 gi|300909208|ref|ZP_07126669.1| peptide chain release factor RF2 [Lactobacillus reuteri SD2112]
 gi|227184908|gb|EEI64979.1| peptide chain release factor RF2 [Lactobacillus reuteri CF48-3A]
 gi|300893073|gb|EFK86432.1| peptide chain release factor RF2 [Lactobacillus reuteri SD2112]
          Length = 332

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 158/325 (48%), Positives = 211/325 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +  +A+ ++ E   L         ++D++ D    LEL   E D  + ++  
Sbjct: 1   MAQPDFWNDNEQAQKVIAENNILKEKRDTFVNLRDQISDLETSLELLAVEPDDDLQKDFE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +    +  +E  +   LL GE D+ +A LE+H GAGGTE+QDW  MLLRMY RW E+  
Sbjct: 61  ASFTNTQKALEQYRLTQLLDGEYDAKNAILEIHPGAGGTEAQDWGEMLLRMYIRWGEQHA 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E      G+EAGIKS TLLIKG NA+G+L+ E+GVHRLVRISP+D+  RRHTSF+S+
Sbjct: 121 FSVETASYEAGDEAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDAAGRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDS+E++I  SD R+DT+R+SGAGGQH+N T+SAVRITHIPTG+V   Q ERSQ
Sbjct: 181 DVMPELDDSVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHIPTGIVTSSQAERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A NML++KLYELE +K+ +     E  + +IGWG QIRSYV  PY +VKD RT 
Sbjct: 241 LQNRVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLDIGWGSQIRSYVFHPYTLVKDNRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  K
Sbjct: 301 YETHNGQAVMDGDLDPFIDAFLQWK 325


>gi|15965084|ref|NP_385437.1| peptide chain release factor 2 [Sinorhizobium meliloti 1021]
 gi|307315054|ref|ZP_07594639.1| peptide chain release factor 2 [Sinorhizobium meliloti BL225C]
 gi|307317885|ref|ZP_07597323.1| peptide chain release factor 2 [Sinorhizobium meliloti AK83]
 gi|15074263|emb|CAC45910.1| Probable peptide chain release factor 2 (RF-2) protein
           [Sinorhizobium meliloti 1021]
 gi|306896647|gb|EFN27395.1| peptide chain release factor 2 [Sinorhizobium meliloti AK83]
 gi|306898893|gb|EFN29543.1| peptide chain release factor 2 [Sinorhizobium meliloti BL225C]
          Length = 342

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 231/328 (70%), Positives = 280/328 (85%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
           N K EDP LW +  EA+ LMRERQ LD+ I+ ++  + +L DN+ L+EL  EE D +I+ 
Sbjct: 2   NNKAEDPSLWNDAAEAQKLMRERQQLDDGINGLRRFEQQLNDNIELIELGEEEGDSAIVA 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E  + L++++ E   KQ E++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWAE
Sbjct: 62  EAEEALRQLRGEAAKKQVEAMLSGEADQNDTYLEVHSGAGGTESQDWANMLLRMYTRWAE 121

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           ++ +K E +EI DGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSF
Sbjct: 122 RQGYKVELMEIQDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSF 181

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           SSIWVYPVVD+SI+I+I+ESDCRIDTYR+SGAGGQHVNTTDSAVRITH+P+G+VVQCQQE
Sbjct: 182 SSIWVYPVVDESIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHMPSGIVVQCQQE 241

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQHKN+A+AW+MLRA+LYE EL+KREE AN   +SKT+IGWG QIRSYVLQPYQ+VKDL
Sbjct: 242 RSQHKNRAKAWDMLRARLYEAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKDL 301

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           RT +E +SP DVLDG+L++FM+A LA +
Sbjct: 302 RTGVESSSPGDVLDGELNEFMEAALAHR 329


>gi|47093711|ref|ZP_00231463.1| peptide chain release factor 2 [Listeria monocytogenes str. 4b
           H7858]
 gi|254992782|ref|ZP_05274972.1| peptide chain release factor 2 [Listeria monocytogenes FSL J2-064]
 gi|47017905|gb|EAL08686.1| peptide chain release factor 2 [Listeria monocytogenes str. 4b
           H7858]
 gi|328465115|gb|EGF36383.1| peptide chain release factor 2 [Listeria monocytogenes 1816]
          Length = 327

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 167/325 (51%), Positives = 216/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP+ W +   A+ ++ E             +++      I LEL  EE D  + +E  
Sbjct: 1   MLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ 
Sbjct: 61  KDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+
Sbjct: 121 FKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ
Sbjct: 181 DVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD+F+ A L  +
Sbjct: 301 YETGNIQAVMDGDLDEFINAYLRSR 325


>gi|296140715|ref|YP_003647958.1| peptide chain release factor 2 [Tsukamurella paurometabola DSM
           20162]
 gi|296028849|gb|ADG79619.1| peptide chain release factor 2 [Tsukamurella paurometabola DSM
           20162]
          Length = 371

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 155/355 (43%), Positives = 216/355 (60%), Gaps = 4/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D   +R+  L  K  DP LW +   A+ +  +  H  + +  + ++
Sbjct: 12  LETTLQTVEKVIDLDELRRRVDELEHKASDPELWNDQANAQQVTSQLSHAQSELRRVTDL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY---KQFESLLSGEADSNDAYL 119
           + RL D  +L ELA  E+   +     D               + +++LSGE D+ DA +
Sbjct: 72  RQRLDDLPVLYELAEAEEGDDLAAALEDADADRAKLRGEIEAMEVKTMLSGEYDARDALV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + AGAGG ++ DWA ML+RMY RWAEK  +  E  +    EEAG+KSAT  IK   AYG
Sbjct: 132 NIRAGAGGVDAADWAEMLMRMYIRWAEKHGYGVEVYDTSYAEEAGLKSATFAIKTDYAYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  E G HRLVRISP+D+  RR TSF+ + V PVV+ +  I++ E++ R+D YR+SG G
Sbjct: 192 TLSVEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIDVDENEVRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL E + Q+     +  
Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMKVLQAKLLERKRQEERAQMDAL 311

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           ++++    WG Q+RSYVL PYQMVKDLRTN E  +PS VLDGDLD F++A +  +
Sbjct: 312 KTTEG-ASWGNQMRSYVLHPYQMVKDLRTNYEVNNPSAVLDGDLDGFIEAGIRWR 365


>gi|291523975|emb|CBK89562.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium
           rectale DSM 17629]
          Length = 330

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 152/324 (46%), Positives = 217/324 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P  W +  +++  M+E + + + ++   +++++  D   ++E+  EE+D S++ E  
Sbjct: 1   MEAPDFWDDPEKSQSKMKELKSMKDDVATYAKLKEQYEDIETMIEMGYEENDESLIPEIQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L   +   +  + ++LLSGE D  +A L ++AGAGGTES DWA ML RMY++WA+K+ 
Sbjct: 61  QMLDDFESTYDGIRMKTLLSGEYDKCNAILRLNAGAGGTESCDWAAMLFRMYSKWADKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L+  DG+EAGIKS T  + G NAYG+LK E+GVHRLVRISP+++  +R TSF S 
Sbjct: 121 FTLEVLDSLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ ++IE+ + D RIDTYR+SGAGGQH+N T SA+RITH P+G+VVQCQ ERSQ
Sbjct: 181 DVMPDIEEDLDIEVKDEDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK +A  ML+AKLY L+ ++             EIGWG QIRSYVLQPY MVKD RT+
Sbjct: 241 HMNKDKAMQMLKAKLYLLKQEENAAKEAGIRGEVKEIGWGSQIRSYVLQPYTMVKDHRTD 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
           +E  +   VLDG++D F+   L  
Sbjct: 301 VETGNADAVLDGNIDIFINGYLKW 324


>gi|313847717|emb|CBY16707.1| putative peptide chain release factor 2 [Chlamydophila psittaci
           RD1]
          Length = 368

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 164/358 (45%), Positives = 222/358 (62%), Gaps = 8/358 (2%)

Query: 3   LSRQLNCL-------GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA 55
           L ++L  L       G   D +   Q LS L  +T     WQ+V  A  +      L   
Sbjct: 5   LDKRLEGLLTGLALAGRSLDLEGKRQELSILEEQTLKEDFWQDVTSAGKVSERIASLKRQ 64

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           IS  +E + R+ +    L       D  + ++        +  +   + + LLSGE D N
Sbjct: 65  ISHYEEFKVRVDNLAFFLNDGDVSADPELREDLEKEFAICENILSEWETQRLLSGEVDKN 124

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
             +L ++AGAGGTES DW  ML RMY RWA + ++K E ++  +G+ AGIK  T+   G 
Sbjct: 125 PCFLTINAGAGGTESCDWVEMLFRMYCRWAAQHQWKVEVIDRQEGDVAGIKHVTVKFSGD 184

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYG+ K E+GVHRLVRISP+DSN++RHTSF+S+ VYP +DD IEI+I  +D RIDT+R+
Sbjct: 185 YAYGYAKAERGVHRLVRISPFDSNAKRHTSFASVDVYPEIDDEIEIDIRPNDLRIDTFRS 244

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN TDSAVRITHIPTG++V CQ+ERSQ +N+     MLRA++Y+  LQ+R E 
Sbjct: 245 SGAGGQHVNVTDSAVRITHIPTGIMVSCQRERSQIQNRESCMKMLRARMYQQILQERLEK 304

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
             I   +K EI WG QIR+YV QPY +VKD+RT  E  +   ++DG+ LDDF+KA LA
Sbjct: 305 QLIDRKNKKEIAWGSQIRNYVFQPYTLVKDVRTGHETGNVQAMMDGELLDDFVKAYLA 362


>gi|257877567|ref|ZP_05657220.1| peptide chain release factor 2 [Enterococcus casseliflavus EC20]
 gi|257811733|gb|EEV40553.1| peptide chain release factor 2 [Enterococcus casseliflavus EC20]
          Length = 329

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 162/325 (49%), Positives = 217/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ ++              ++ + L +  ++LE+  EE D  +  E  
Sbjct: 1   MADPTFWDDSEKAQQVINANNANKETYDQFNQLAEELEELEVMLEMIQEEADPEMEAELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             + ++  ++   +   LL    D N+A +E+H GAGGTESQDW +MLLRMYTR+ E+  
Sbjct: 61  ARITKLNEKMASYELSMLLDEPYDRNNAIIELHPGAGGTESQDWGSMLLRMYTRFCEQHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           ++ E L+   G+EAGIKS TLL+KG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+
Sbjct: 121 YQVETLDYQAGDEAGIKSVTLLVKGHNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D +I++EI+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ
Sbjct: 181 DVMPELDGAIDVEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML+AKLY+LE++K+E+ A      + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQLEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L +K
Sbjct: 301 FETGNVQAVMDGDLDGFIDAYLKLK 325


>gi|152991276|ref|YP_001356998.1| peptide chain release factor 2 [Nitratiruptor sp. SB155-2]
 gi|166225114|sp|A6Q582|RF2_NITSB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|151423137|dbj|BAF70641.1| peptide chain release factor 2 [Nitratiruptor sp. SB155-2]
          Length = 368

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 172/353 (48%), Positives = 234/353 (66%), Gaps = 2/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL +++  +  +   D   +RL  +      P  W +  +A  + +E+  L   +   +E
Sbjct: 12  KLEQKIENIKNIIKPDLITKRLKEIEQLENSPDFWNDAKKAGEIQKEKNRLSRILEKFEE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            +  + D   L E+A EE+D   L    +    ++ +V   + E++LSGE D  +A + +
Sbjct: 72  ARSSVEDAKDLFEMATEEEDTETLNMLFEEAPTLEEKVNKIEIETMLSGENDDKNAIVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA++L RMY RWAE+  FK E L+  +GEEAGIK  + +IKG NAYG+L
Sbjct: 132 HPGAGGTESQDWASILYRMYLRWAERHGFKVEVLDYQEGEEAGIKDVSFIIKGENAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVRISP+DSN+RRHTSF+S+ V P VDD I I I + D R+DTYRASGAGGQ
Sbjct: 192 KAENGIHRLVRISPFDSNARRHTSFASVMVSPEVDDDINIVIEDKDIRVDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSA+RITHIPTG+VVQCQ +RSQHKN+A A  ML+++LYELEL+K+       E 
Sbjct: 252 HVNKTDSAIRITHIPTGIVVQCQNDRSQHKNRATAMKMLKSRLYELELEKKRAEQEGIE- 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K++IGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  +
Sbjct: 311 -KSDIGWGHQIRSYVLAPYQQVKDTRSNKAYSNVEAILDGDIDKIIEDVLIAE 362


>gi|55821157|ref|YP_139599.1| peptide chain release factor 2 [Streptococcus thermophilus LMG
           18311]
 gi|55823068|ref|YP_141509.1| peptide chain release factor 2 [Streptococcus thermophilus
           CNRZ1066]
 gi|116627872|ref|YP_820491.1| peptide chain release factor 2 [Streptococcus thermophilus LMD-9]
 gi|55737142|gb|AAV60784.1| peptide chain release factor 2 [Streptococcus thermophilus LMG
           18311]
 gi|55739053|gb|AAV62694.1| peptide chain release factor 2 [Streptococcus thermophilus
           CNRZ1066]
 gi|116101149|gb|ABJ66295.1| bacterial peptide chain release factor 2 (bRF-2) [Streptococcus
           thermophilus LMD-9]
          Length = 337

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 150/336 (44%), Positives = 213/336 (63%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L  +  +P  W + I A+   +E   L         +++   +    L L + 
Sbjct: 1   MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMKELSDETE--LYLEML 58

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E+D S+ +E  + L+++   +   +   LLS   D N+A LE+H G+GGTE+QDWA MLL
Sbjct: 59  EEDDSVQEELEETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWAEMLL 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY R+   + FK E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS
Sbjct: 119 RMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSF+S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG
Sbjct: 179 AKRRHTSFTSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY++E +K+ E  N  +  K EI WG QIRSYV  
Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RT  E      V+DGD++ F+ A L  +
Sbjct: 299 PYTMVKDHRTGYEVAQVDKVMDGDIEGFIDAYLKWR 334


>gi|308071079|ref|YP_003872684.1| peptide chain release factor 2 [Paenibacillus polymyxa E681]
 gi|305860358|gb|ADM72146.1| Peptide chain release factor 2 (RF-2) [Paenibacillus polymyxa E681]
          Length = 331

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 162/325 (49%), Positives = 225/325 (69%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +  +A+ ++ E   + +++   ++++    D  ++ ELA EE D ++  E  
Sbjct: 1   MAAPDFWDDNDKAQAVIAEMNAVKSSVDSYEQLRLEYEDAGMMAELADEEGDETLAGEIE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           ++++ +  +++  + + LL+   D  +A LE+H GAGGTESQDW  MLLRMYTRWAEKR 
Sbjct: 61  NSIRSLLSKLQEFELQLLLNQPYDKLNAILELHPGAGGTESQDWGQMLLRMYTRWAEKRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLAGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + D +++EI   D +IDTYRASGAGGQH+NTTDSAVRITH+P+G+VV CQ ERSQ
Sbjct: 181 DVVPEIADDVDVEIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPSGIVVTCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  MLR+KLYE +++++ +  +     +++I WG QIRSYV  PY MVKD RT+
Sbjct: 241 IKNREQAMTMLRSKLYERKIEEQRQQLDEIRGEQSDIAWGSQIRSYVFHPYSMVKDHRTS 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DGDLD F+   L  +
Sbjct: 301 VETGNVGAVMDGDLDPFIDGYLRSQ 325


>gi|328945974|gb|EGG40121.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1087]
          Length = 325

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 148/325 (45%), Positives = 204/325 (62%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L        ++ +   ++ ILL+   E++      E  
Sbjct: 1   MTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDFMAEDESVQGELEEK 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
                    +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 61  LAELEK--MMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|89100645|ref|ZP_01173503.1| peptide chain release factor 2 [Bacillus sp. NRRL B-14911]
 gi|89084669|gb|EAR63812.1| peptide chain release factor 2 [Bacillus sp. NRRL B-14911]
          Length = 328

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 168/325 (51%), Positives = 219/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P+ W +   A++++ E   L + +    ++ +   +  +  EL  EE D  +  E +
Sbjct: 1   MLHPNFWDDQKAAQVVISESNALKDQVHEFHDLYETFENLELTYELVKEESDEDLQNELA 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  +   +   + + LLS E D N+A LE+H GAGGTESQDW +MLLRMYTRWAEK+ 
Sbjct: 61  EELTELTKRLAQFELQLLLSEEYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL IKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLAIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D IEI+I   D +IDTYRASGAGGQH+NTTDSAVRITH+PT VVV CQ ERSQ
Sbjct: 181 EVMPEFNDEIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNVVVTCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ +A  ML+AKLY+ +++++E+        + EIGWG QIRSYV  PY MVKD RT+
Sbjct: 241 IKNRERAMKMLQAKLYQKKIEEQEQELLEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTS 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  +
Sbjct: 301 TESGNVQGVMDGDLDPFINAYLRSR 325


>gi|328948955|ref|YP_004366292.1| hypothetical protein Tresu_2126 [Treponema succinifaciens DSM 2489]
 gi|328449279|gb|AEB14995.1| hypothetical protein Tresu_2126 [Treponema succinifaciens DSM 2489]
          Length = 381

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 162/353 (45%), Positives = 226/353 (64%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   ++ + G  D D+  ++++     T  P  W +  +A  +M + + L   I   ++
Sbjct: 15  QLKADVSAVWGRLDVDDINKKIAEKEALTTAPGFWDDNAKATKIMNDIKLLKGRIEPWQD 74

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  R+ D   L EL LEE+D SI  E  +  ++ K + E++   +LLS E D ND +L V
Sbjct: 75  LVQRVDDLEALYELGLEENDKSIESELKEQYEKAKADYEHQSILNLLSDEVDKNDCFLSV 134

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTE+ DW  ML RMY RWAE+  +K E L   + E  G+KS  + I GP  YG+ 
Sbjct: 135 HAGAGGTEACDWTFMLSRMYQRWAERHGYKVEVLSQEEAE-GGLKSINMKISGPYVYGYT 193

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE GVHRLVRISP+D+N+RRHTSF+S++V+PV+DDSIE+ I   D R+DTYR+ G GGQ
Sbjct: 194 KGEAGVHRLVRISPFDANARRHTSFASVYVFPVLDDSIEVNIDPKDLRVDTYRSGGKGGQ 253

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVR THIPTG+VV C  ERSQ  N+A A ++L+++LYE   ++RE+  +    
Sbjct: 254 HVNKTESAVRFTHIPTGIVVACDSERSQLMNRASAMSILKSRLYEYYKEEREKENSKFAG 313

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K +I +G QIRSYV QPY MVKD RT     +   V+DGD+D F+   L+ K
Sbjct: 314 EKKDISFGSQIRSYVFQPYTMVKDHRTKYSVGNIQGVMDGDIDGFLDEFLSAK 366


>gi|328949576|ref|YP_004366911.1| hypothetical protein Marky_0036 [Marinithermus hydrothermalis DSM
           14884]
 gi|328449900|gb|AEB10801.1| hypothetical protein Marky_0036 [Marinithermus hydrothermalis DSM
           14884]
          Length = 367

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 145/352 (41%), Positives = 211/352 (59%), Gaps = 5/352 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L+ L G  D     +RL+ L  +  DP+LW +   A+ + +E   +   +   + +
Sbjct: 6   LEARLDALRGYLDIPAKERRLAELEAELNDPNLWNDAERARRISQEAARIRRTVETYRTL 65

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L   + L      E+  ++  E  +  ++++        E+LL+      +A L + 
Sbjct: 66  EADLEGLVELWNELDPEEREALAGEAEEAQKKLEALYH----ETLLTFPHAEKNAILTIQ 121

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTE+ DWA MLLRMY R A++  F  E +++  G EAGI  A ++++G NAYG L 
Sbjct: 122 PGAGGTEACDWAEMLLRMYRRLADRLGFSVEVVDVTPGAEAGIDYAQIIVRGENAYGLLS 181

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+D++ RRHTSF+ + V P VDD++E+EI   D RID +R+ G GGQ 
Sbjct: 182 VENGVHRLVRPSPFDASGRRHTSFAGVEVMPEVDDTVEVEIKPEDLRIDVFRSQGHGGQG 241

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRI H+PTG++V CQ  RSQHKNK  A  +L+++L++LE +K++E        
Sbjct: 242 VNTTDSAVRIVHLPTGIIVTCQNTRSQHKNKEIALKVLKSRLFQLEWKKKQEELAKLRGE 301

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              I WG QIRSYVL     VKD RT + +  P +VLDGD++DF+ A L  K
Sbjct: 302 VKPIEWGSQIRSYVLDKQ-YVKDHRTGLMRHDPQNVLDGDIEDFIWAGLEWK 352


>gi|324990937|gb|EGC22872.1| peptide chain release factor RF2 [Streptococcus sanguinis SK353]
          Length = 325

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 150/325 (46%), Positives = 209/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L        ++ +   ++ ILL+     +D S+  E  
Sbjct: 1   MTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDF--LAEDESVQGELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  ++  +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  EKLAELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|329114780|ref|ZP_08243537.1| Peptide chain release factor 2 [Acetobacter pomorum DM001]
 gi|326695911|gb|EGE47595.1| Peptide chain release factor 2 [Acetobacter pomorum DM001]
          Length = 333

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 194/319 (60%), Positives = 245/319 (76%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W +   A+ +MRER  L N I  ++ ++  + D   L+ELA  E D  ++ E    L+ +
Sbjct: 2   WNDSDAAQKMMRERTLLANQIEGVEALETNVRDTSELIELAEAEGDADLVAEGMATLRDL 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
             E + ++ ESLLSGEADSND YLEV+AGAGGTE+QDW  MLLRMYTRWAE   +K   +
Sbjct: 62  AEEAKRRETESLLSGEADSNDCYLEVNAGAGGTEAQDWTEMLLRMYTRWAEAHGYKVTLM 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E  +GE+AG+KSAT+ + GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPV+
Sbjct: 122 ESSEGEQAGLKSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVI 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DDSIEIEI+++D ++DT+RASGAGGQHVN TDSA+RITH+PTG+VV CQ +RSQH+N+A 
Sbjct: 182 DDSIEIEINDADLKVDTFRASGAGGQHVNKTDSAIRITHMPTGIVVACQTDRSQHRNRAT 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A  MLRA+LYE ELQKRE  A   E++KT+IGWG QIRSYVL PYQMVKDLRT +E  +P
Sbjct: 242 AMQMLRARLYEAELQKREAEAAAAEAAKTDIGWGHQIRSYVLAPYQMVKDLRTGVETGNP 301

Query: 336 SDVLDGDLDDFMKATLAIK 354
             VLDGDLD FM A LA++
Sbjct: 302 DAVLDGDLDAFMAAALAMR 320


>gi|172041186|ref|YP_001800900.1| peptide chain release factor 2 [Corynebacterium urealyticum DSM
           7109]
 gi|171852490|emb|CAQ05466.1| peptide chain release factor RF-2 [Corynebacterium urealyticum DSM
           7109]
          Length = 377

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 155/358 (43%), Positives = 212/358 (59%), Gaps = 7/358 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R   L  +  DP LW +   A+ +  E   +   +  I+E+
Sbjct: 12  LEGTLTTIERVLDLDELDWRARELEDQAADPSLWDDPDHAQQVTSELSRVQAKLKKIREL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQ------ETSDNLQRIKLEVEYKQFESLLSGEADSND 116
           + RL D  +L  +A EE                +    ++  +E  +  ++LSGE D  +
Sbjct: 72  RQRLEDLPVLYNMAEEEAAEDPAASEDAVAMAEEERSALRAAIESLEITTMLSGEYDQRE 131

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
           A + + +GAGG ++ DWA MLLRMYTRWAE+   K +  +I   EEAGIKSAT +I G  
Sbjct: 132 ALVNIRSGAGGVDAADWAEMLLRMYTRWAEQHGHKVDIYDISYAEEAGIKSATFVIHGDY 191

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
            YG L  EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IE+ ++D R+D YR+S
Sbjct: 192 MYGTLSVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDSIEVPDADVRVDVYRSS 251

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E + Q+ +   
Sbjct: 252 GPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKRQEEKAEM 311

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +   +      WG Q+RSYVL PYQMVKDLRT  E   P  VLDGDLD  ++A +  +
Sbjct: 312 DALGAG-GNASWGNQMRSYVLHPYQMVKDLRTEYEVGDPQKVLDGDLDGLIEAGIRWR 368


>gi|262037715|ref|ZP_06011157.1| peptide chain release factor 2 [Leptotrichia goodfellowii F0264]
 gi|261748187|gb|EEY35584.1| peptide chain release factor 2 [Leptotrichia goodfellowii F0264]
          Length = 348

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 164/349 (46%), Positives = 226/349 (64%), Gaps = 2/349 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GG+FD D+   ++  +  KT +P  W N   ++  ++E   L   I   ++I    
Sbjct: 1   MRKSGGIFDLDSLNLKIERIEKKTAEPDFW-NRENSQETLKELNILKKLIEEYEKISGMN 59

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D  +++E     DD    +         +   +  + + LL  + DSN+A L ++AGAG
Sbjct: 60  EDVSVMIEFIEAGDDSFEKELDDKIDTVTEEI-QNFKTKLLLDEKYDSNNAILTINAGAG 118

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+ DW  ML RMY RW+ ++ FK E L+   GEEAGIKS TL IKG  AYG+LKGE+G
Sbjct: 119 GTEACDWTEMLYRMYDRWSNRKDFKVEVLDSLSGEEAGIKSITLNIKGSYAYGYLKGEKG 178

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+DSN +RHTSF+++ V P +DD +E+ I   D ++DTYRASGAGGQHVNTT
Sbjct: 179 VHRLVRISPFDSNGKRHTSFTAVNVVPEIDDDVEVNIRPEDLKVDTYRASGAGGQHVNTT 238

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPT  VV CQ+ERSQ KNK  A  +L+++L+E+EL+KRE+     + ++++I
Sbjct: 239 DSAVRITHIPTNTVVTCQKERSQLKNKETAMKILKSRLFEIELEKREKEMENIKGTESKI 298

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            WG QIRSYV QPY+MVKD RT  E+ +   V+DGD+D F+   L   K
Sbjct: 299 EWGSQIRSYVFQPYKMVKDHRTKAEEGNVDKVMDGDIDSFINEYLKFYK 347


>gi|228477420|ref|ZP_04062056.1| peptide chain release factor 2 [Streptococcus salivarius SK126]
 gi|228250855|gb|EEK10043.1| peptide chain release factor 2 [Streptococcus salivarius SK126]
          Length = 337

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 151/336 (44%), Positives = 214/336 (63%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L  +  +P  W + I A+   +E   L         +Q+   +    L L + 
Sbjct: 1   MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMQELSDETE--LYLEML 58

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E+D S+ +E  + L+++   +   +   LLS   D N+A LE+H G+GGTE+QDWA+MLL
Sbjct: 59  EEDDSVQEELEETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLL 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY R+   + FK E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS
Sbjct: 119 RMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSF+S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG
Sbjct: 179 AKRRHTSFTSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY++E +K+ E  N  +  K EI WG QIRSYV  
Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RT  E      V+DGD++ F+ A L  +
Sbjct: 299 PYTMVKDHRTGYEVAQVDKVMDGDIEGFIDAYLKWR 334


>gi|291522080|emb|CBK80373.1| bacterial peptide chain release factor 2 (bRF-2) [Coprococcus catus
           GD/7]
          Length = 336

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 157/325 (48%), Positives = 220/325 (67%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
             E+P  W N  +A   M+E ++L + +     ++    D   LLE+  EE+D S++ E 
Sbjct: 1   MMEEPGFWDNADKANNSMKELKNLKDTVEEYHRLETAWEDVETLLEMGYEENDASLIPEV 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            + +   +   E+ + ++LLS E D ++A + +HAGAGGTE+ DW +ML RMYTRWAEK 
Sbjct: 61  QEAMADFEKRFEHLRIKTLLSEEYDGDNAIVTLHAGAGGTEACDWVSMLFRMYTRWAEKH 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            F T  L+  DGEEAGIKS T+ I G NAYG++K E+G+HRLVRISP+++  +R TSF+S
Sbjct: 121 GFTTTVLDYLDGEEAGIKSVTVEIAGENAYGYMKSEKGIHRLVRISPFNAAGKRQTSFAS 180

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
             V P +++ ++IEI+E D RIDTYR+SGAGGQH+N T SA+RITH+PT +VVQCQ ERS
Sbjct: 181 CDVMPDIEEDLDIEINEDDLRIDTYRSSGAGGQHINKTSSAIRITHLPTNIVVQCQNERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QH NK +A  ML+AKLY L+ Q+ +E  +       +  WG QIRSYV+QPY++VKD RT
Sbjct: 241 QHMNKDKAMQMLKAKLYLLKQQENQEKLSGIRGEVKDNAWGSQIRSYVMQPYKLVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353
             E ++   V+DGD+D F+ A L  
Sbjct: 301 GAESSNVDAVMDGDIDLFINAYLKW 325


>gi|332686413|ref|YP_004456187.1| peptide chain release factor 2 [Melissococcus plutonius ATCC 35311]
 gi|332370422|dbj|BAK21378.1| peptide chain release factor 2 [Melissococcus plutonius ATCC 35311]
          Length = 328

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 160/325 (49%), Positives = 220/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             D + W N  +A+ ++ E            ++ D L +  I+ EL   + D +I  E  
Sbjct: 1   MADVNFWNNAKQAQQIINETNREKEKYQQFNQLADELEELEIMYELQQVDFDEAIQTELI 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             +++++ +++  +   LL+G  D N+A +E H GAGGTESQDW +MLLRMY RWAE R 
Sbjct: 61  QRIKQLEKQLKTYELALLLNGPYDKNNAIVEFHPGAGGTESQDWGSMLLRMYMRWAESRN 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+ E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+
Sbjct: 121 FQIEVLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + P +D++IEI+I+  D ++DTYRASGAGGQH+N T+SAVRITHIPT  VV  Q +RSQ
Sbjct: 181 DIMPELDETIEIDINPDDLKVDTYRASGAGGQHINKTESAVRITHIPTSTVVSSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA   L++KLY+LE++K+ + +      + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMKTLKSKLYQLEMEKKAQESAELRGEQLEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DG++D+F+ A L  +
Sbjct: 301 METGNVQAVMDGEIDNFIDAYLKWQ 325


>gi|219849743|ref|YP_002464176.1| hypothetical protein Cagg_2879 [Chloroflexus aggregans DSM 9485]
 gi|254790911|sp|B8G607|RF2_CHLAD RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|219544002|gb|ACL25740.1| hypothetical protein Cagg_2879 [Chloroflexus aggregans DSM 9485]
          Length = 367

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 154/351 (43%), Positives = 219/351 (62%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L G  D       +  L  +  DP LW     A+ LM+    L   ++   ++
Sbjct: 12  IRERFANLRGHLDLAAKQAEIEQLEVRASDPELWNTPRVAQELMQRLTRLKEEVALWNDL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             R+     L+ELA +E D S+  + +  L+ ++ EV  ++ E LLSG  D  DA+L + 
Sbjct: 72  DHRMTSLAELIELAEQEGDESLAADLAAELRAVQREVAQRELEILLSGPYDDRDAFLSIQ 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG GGT++QDWA MLLRMYTRWAE+R +    +++ +GEEAGIKSAT+ I+GP AYG+ +
Sbjct: 132 AGMGGTDAQDWAAMLLRMYTRWAERRGYTVNLIDLSEGEEAGIKSATIEIRGPYAYGYAR 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRL+R+SP+++   R TSF+ + V P VDD+ E+EI   D RID +R+ G GGQ 
Sbjct: 192 AEAGVHRLIRLSPFNAAHTRQTSFARVEVMPEVDDAPEVEIKPEDLRIDVFRSGGHGGQG 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ ERSQ +N+  A  +LRA+L E ELQ++ E        
Sbjct: 252 VNTTDSAVRITHLPTGIVVTCQNERSQIQNRETALRVLRARLLERELQRQAEERARLRGE 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             E  +G Q+R+Y L P  +VKD RT+ E ++   VLDG++D F++A L  
Sbjct: 312 YREAAFGNQMRTYYLHPSTLVKDHRTDYETSNVQAVLDGEIDPFIEAFLRA 362


>gi|148543602|ref|YP_001270972.1| peptide chain release factor 2 [Lactobacillus reuteri DSM 20016]
 gi|184153010|ref|YP_001841351.1| peptide chain release factor 2 [Lactobacillus reuteri JCM 1112]
 gi|227363435|ref|ZP_03847559.1| peptide chain release factor RF2 [Lactobacillus reuteri MM2-3]
 gi|325681956|ref|ZP_08161474.1| peptide chain release factor RF2 [Lactobacillus reuteri MM4-1A]
 gi|148530636|gb|ABQ82635.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus
           reuteri DSM 20016]
 gi|183224354|dbj|BAG24871.1| peptide chain release factor 2 [Lactobacillus reuteri JCM 1112]
 gi|227071535|gb|EEI09834.1| peptide chain release factor RF2 [Lactobacillus reuteri MM2-3]
 gi|324978600|gb|EGC15549.1| peptide chain release factor RF2 [Lactobacillus reuteri MM4-1A]
          Length = 332

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 159/325 (48%), Positives = 211/325 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +  +A+ ++ E   L         ++D++ D    LEL   E D  + +E  
Sbjct: 1   MAQPDFWNDNEQAQKVIAENNILKEKRDTFVNLRDQIGDLETSLELLAVEPDDDLQKEFE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +    +  +E  +   LL GE D+ +A LE+H GAGGTE+QDW  MLLRMY RW E+  
Sbjct: 61  ASFTNTQKALEQYRLTQLLDGEYDAKNAILEIHPGAGGTEAQDWGEMLLRMYVRWGEQHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E      G+EAGIKS TLLIKG NA+G+L+ E+GVHRLVRISP+D+  RRHTSF+S+
Sbjct: 121 FSVETASYEAGDEAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDAAGRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDS+E++I  SD R+DT+R+SGAGGQH+N T+SAVRITHIPTG+V   Q ERSQ
Sbjct: 181 DVMPELDDSVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHIPTGIVTSSQAERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A NML++KLYELE +K+ +     E  + +IGWG QIRSYV  PY +VKD RT 
Sbjct: 241 LQNRVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLDIGWGSQIRSYVFHPYTLVKDNRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  K
Sbjct: 301 YETHNGQAVMDGDLDPFIDAFLQWK 325


>gi|269215856|ref|ZP_06159710.1| peptide chain release factor 2 [Slackia exigua ATCC 700122]
 gi|269130806|gb|EEZ61882.1| peptide chain release factor 2 [Slackia exigua ATCC 700122]
          Length = 364

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 145/353 (41%), Positives = 213/353 (60%), Gaps = 2/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ +L    G    +   +RL  L+     P  W +   A+   +    + + +   + 
Sbjct: 11  ELAERLAAARGYLHIEENERRLHDLDAVISQPGFWDDAQAAQATSKRASDIRSTLDEYRA 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
               L D    LEL  E+D  ++  +           ++  + ES  +  +D+ DA + V
Sbjct: 71  ACATLEDARAALELIEEDDAFAVEFDELRAGLS--SALDRMEVESWFTDPSDACDAIVSV 128

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           + G+GG E+QDW +ML RMY R+AEK+ +K + L++  GE  G+  A + I+G NA+G L
Sbjct: 129 NPGSGGLEAQDWTDMLYRMYVRYAEKKGWKVKLLDVVPGEVIGLDRAVVQIEGKNAFGML 188

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVRISP D   RR T+F+ + V PVV+D IE+EI+ SD R+D YR+SG GGQ
Sbjct: 189 RSEHGVHRLVRISPTDDKKRRQTTFAGVEVLPVVEDDIEVEINPSDVRVDVYRSSGPGGQ 248

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+TH+PTG+VV CQ E+SQ +NK  A+ +LRAKLYELE QKRE+  +    
Sbjct: 249 CVNTTDSAVRLTHLPTGIVVTCQNEKSQLQNKESAFKVLRAKLYELERQKREDEMDALRG 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K +  +G QIR+YVL PYQ+VKD+R+ +E  +   VLDG +D+F+      +
Sbjct: 309 EKRDNSFGSQIRNYVLYPYQLVKDVRSGVETGNVDAVLDGQIDEFVIGYHRWR 361


>gi|28896314|ref|NP_802664.1| peptide chain release factor 2 [Streptococcus pyogenes SSI-1]
 gi|28811565|dbj|BAC64497.1| putative peptide chain release factor 2 [Streptococcus pyogenes
           SSI-1]
          Length = 337

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 149/336 (44%), Positives = 212/336 (63%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L     +P  W + I A+   +E   L         +Q+   +  +LLE+  E
Sbjct: 1   MEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +D   + +E  +NL ++       +   LLS   D N+A LE+H G+GGTE+QDW ++LL
Sbjct: 61  DDF--LKEELEENLMQLDKITGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLL 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTR+     FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS
Sbjct: 119 RMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG
Sbjct: 179 AKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  
Sbjct: 239 IVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN E      V+DG+++ F+ A L  +
Sbjct: 299 PYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 334


>gi|325953656|ref|YP_004237316.1| peptide chain release factor 2 [Weeksella virosa DSM 16922]
 gi|323436274|gb|ADX66738.1| peptide chain release factor 2 [Weeksella virosa DSM 16922]
          Length = 366

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 146/351 (41%), Positives = 226/351 (64%), Gaps = 2/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + +++  L    + +    +++    KT  P  W +  +A+M M+E + +   I   + +
Sbjct: 10  IQKRIQALYTYLEIEQKRIQVTNDEEKTASPDFWDDPKKAEMFMKELRSIKKWIEDYESV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D  +L+E   E +     +E  ++  +    +E  +F+++LS E D+  A L++ 
Sbjct: 70  EQAANDLEVLIEFNKEGEV--SDEEVQEHYSKTIKLLENIEFKNMLSDEGDNLGAILQIT 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML+RMY  WAE   +K   L    G+ AG+K+ TL I G  A+GWLK
Sbjct: 128 AGAGGTESCDWASMLMRMYLMWAESHGYKVRELNFQAGDVAGVKTVTLEIDGEFAFGWLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+DSN++RHTSF S +V P+VD++IEI+I+ +D  + T R+ GAGGQ+
Sbjct: 188 GENGVHRLVRISPFDSNAKRHTSFVSAYVSPMVDETIEIDINPADIEMQTSRSGGAGGQN 247

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++ V++TH PTG+VV CQ ERSQ  N+ +A  ML+++LY++EL K+    N  ES+
Sbjct: 248 VNKVETKVQLTHKPTGIVVICQIERSQLANRERAMEMLKSELYKIELDKKMAARNEIESN 307

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K +I WG QIR+YV+ PY++VKD+RT  E  +   V++GD+D F+K+ L +
Sbjct: 308 KMKIEWGSQIRNYVMHPYKLVKDVRTGTETGNVDAVMNGDIDQFLKSYLML 358


>gi|322385191|ref|ZP_08058838.1| peptide chain release factor RF2 [Streptococcus cristatus ATCC
           51100]
 gi|321270815|gb|EFX53728.1| peptide chain release factor RF2 [Streptococcus cristatus ATCC
           51100]
          Length = 325

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 149/325 (45%), Positives = 210/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L        ++ +   ++ ILL+     +D S+ +E  
Sbjct: 1   MTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDF--LAEDDSVQEELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  ++  +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  EKLTELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|78044242|ref|YP_359035.1| peptide chain release factor 2 [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77996357|gb|ABB15256.1| peptide chain release factor 2 [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 371

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 152/353 (43%), Positives = 220/353 (62%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++S ++  +    D     + +  L  KT +P  W N  EA+  ++E   L + I   +E
Sbjct: 11  EISPKIEEMRVSLDIPGKKELVEKLTAKTYEPDFWDNYTEAQKTLKELNRLKDDIEKYEE 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +     +  +LL+L  EE++  +  E  D  +++  ++   + E LLSG  D N A + +
Sbjct: 71  LLKAQEELTVLLQLLEEEENEELAVEAQDKAKKLMEKLHRMEIELLLSGPYDKNSAIVSL 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTE+QDW  ML RMYTRWAE + +K E ++   GEEAG+KS T  ++G  AYG+L
Sbjct: 131 HAGAGGTEAQDWVEMLYRMYTRWAEDKGYKVELIDRLLGEEAGLKSVTFSVEGFGAYGYL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID-TYRASGAGG 240
           K E+GVHRL+RISP+D + RRHTSF+S+ V P V + I     + +     T+R+ GAGG
Sbjct: 191 KAERGVHRLIRISPFDFSGRRHTSFASVDVLPEVAEDIPEIELKEEELKIETFRSGGAGG 250

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVN T+SAVRITH+PTG+ V CQ ERSQ  N+A A  +L+AKL +LE++K+EE      
Sbjct: 251 QHVNKTESAVRITHLPTGITVVCQNERSQLMNRALAEKLLKAKLLDLEMKKKEEEMAKLR 310

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             + EI WG QIR+YV  PY +VKD RT +E      V+DG++D F++A L +
Sbjct: 311 GEQKEIAWGSQIRTYVFHPYSLVKDHRTGVEVGDVQGVMDGEIDIFIEAYLKM 363


>gi|323351855|ref|ZP_08087506.1| peptide chain release factor RF2 [Streptococcus sanguinis VMC66]
 gi|322121912|gb|EFX93644.1| peptide chain release factor RF2 [Streptococcus sanguinis VMC66]
 gi|324993198|gb|EGC25118.1| peptide chain release factor RF2 [Streptococcus sanguinis SK405]
 gi|324995500|gb|EGC27412.1| peptide chain release factor RF2 [Streptococcus sanguinis SK678]
 gi|325687821|gb|EGD29841.1| peptide chain release factor RF2 [Streptococcus sanguinis SK72]
 gi|325689974|gb|EGD31978.1| peptide chain release factor RF2 [Streptococcus sanguinis SK115]
 gi|325696780|gb|EGD38668.1| peptide chain release factor RF2 [Streptococcus sanguinis SK160]
 gi|327461467|gb|EGF07798.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1]
 gi|327469623|gb|EGF15092.1| peptide chain release factor RF2 [Streptococcus sanguinis SK330]
 gi|327473772|gb|EGF19190.1| peptide chain release factor RF2 [Streptococcus sanguinis SK408]
 gi|327489322|gb|EGF21115.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1058]
 gi|332359597|gb|EGJ37415.1| peptide chain release factor RF2 [Streptococcus sanguinis SK49]
 gi|332361549|gb|EGJ39353.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1056]
 gi|332362808|gb|EGJ40602.1| peptide chain release factor RF2 [Streptococcus sanguinis SK355]
 gi|332366326|gb|EGJ44078.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1059]
          Length = 325

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 150/325 (46%), Positives = 209/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L        ++ +   ++ ILL+     +D S+  E  
Sbjct: 1   MTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDF--LAEDESVQGELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  ++  +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  EKLAELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|224125026|ref|XP_002319484.1| predicted protein [Populus trichocarpa]
 gi|222857860|gb|EEE95407.1| predicted protein [Populus trichocarpa]
          Length = 488

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 155/352 (44%), Positives = 226/352 (64%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +++ +  +     W   + RL  L+ +   P LW + + A  + RE   L   +  ++ +
Sbjct: 124 IAQSIQVIKRRLQWKKLMVRLDLLSVQLNKPDLWDDPVHAGKISREHGSLMAKMKKVRTL 183

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L +++ +++LA EEDD  +  E    L +++     K+ E+LLSGE DS   Y+EV 
Sbjct: 184 EQELLEHIDMIKLAREEDDNELESEMLKALLQMRRNSNEKEQEALLSGEQDSCPCYIEVQ 243

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA M+++MY  WA++  +    ++   GE AGIK AT+ + G  A+G+ K
Sbjct: 244 AGAGGTESMDWAKMVMQMYKSWAQRHGYGVTVVDEMPGEIAGIKRATIKVDGEYAFGYAK 303

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+DS  RRHTSF+++ V P+  D    + I+ESD RI+ +RA GAGGQ
Sbjct: 304 AEAGVHRLVRISPFDSGKRRHTSFAAVAVIPILRDGFTHVPINESDLRIERFRAGGAGGQ 363

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTT+SAVRI HIPTG+   CQ ERSQH NK  A  +L+++L + E+ ++ ++      
Sbjct: 364 HVNTTESAVRIVHIPTGITATCQNERSQHMNKDSAMAVLQSRLDQREMARQAQMNAYHTQ 423

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           S T+IGWG QIRSYVL PY+MVKDLRTN E T+P  VL+G++D F+ + L+ 
Sbjct: 424 SLTDIGWGNQIRSYVLHPYRMVKDLRTNYEVTNPDSVLEGEIDGFILSYLSA 475


>gi|120402908|ref|YP_952737.1| peptide chain release factor 2 [Mycobacterium vanbaalenii PYR-1]
 gi|166225112|sp|A1T6D1|RF2_MYCVP RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|119955726|gb|ABM12731.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium
           vanbaalenii PYR-1]
          Length = 368

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 163/354 (46%), Positives = 220/354 (62%), Gaps = 5/354 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R+  L     DP LW +   A+ +  +  H    +  I+E+
Sbjct: 12  LDATLTTVERVIDVDGLRGRIEQLEKDASDPQLWDDQARAQKVTSDLSHAQGELRRIEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L ELA EE     + E    L +++ ++E  +  +LLSGE D  +A + + 
Sbjct: 72  RGRLEDLPVLYELAAEEGGSDEVAEADAELTKLREDIEAMEVRTLLSGEYDEREALVTIR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG L 
Sbjct: 132 SGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPYAYGNLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+ +RR TSF+ + V PV + +  IEI E D R+D YR+SG GGQ 
Sbjct: 192 VEQGTHRLVRISPFDNQNRRQTSFADVEVLPVTETTDHIEIPEGDVRVDVYRSSGPGGQS 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL E   +KR E     ++ 
Sbjct: 252 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLE---RKRLEERAEMDAL 308

Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K + G  WG Q+RSYVL PYQMVKDLRT  E  +PS VLDGD+D F++A +  +
Sbjct: 309 KGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPSAVLDGDIDGFLEAGIRWR 362


>gi|257438202|ref|ZP_05613957.1| peptide chain release factor 2 [Faecalibacterium prausnitzii
           A2-165]
 gi|257199279|gb|EEU97563.1| peptide chain release factor 2 [Faecalibacterium prausnitzii
           A2-165]
          Length = 373

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 147/347 (42%), Positives = 214/347 (61%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  L      D + +R+  L      P  + +   +K +  E   L   ++  +++Q   
Sbjct: 18  VKDLEEALAIDASRKRVQELEHTMSRPGFYDDAELSKKVFDEVGDLKGKLNRFEKLQGLY 77

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   +L +  EE D  ++ E  + +  +   V+  Q  ++L+GE D ++A L  HAG G
Sbjct: 78  DDAETMLVMLDEEYDPDMVPEAEEAVNAVGKAVDELQLMTMLNGEYDHSNAILTFHAGTG 137

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWA ML RMY +WA+      E L+  DG+EAG+KSA++++KG NAYG LK E G
Sbjct: 138 GTEAQDWAEMLYRMYNKWAQAHGMTVEVLDYQDGDEAGMKSASMMVKGANAYGLLKSENG 197

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR+SP+D+N+RR TSF+S+ V P +D++I+++I   D  +  +R+SGAGGQH+N T
Sbjct: 198 VHRLVRVSPFDANARRQTSFASLEVMPELDNTIQVDIRPEDIEMQVFRSSGAGGQHINKT 257

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+ H PTGVVV CQ +RSQ +N+  A  ML+AKLY++  Q+  +  +  +  + EI
Sbjct: 258 SSAVRLIHKPTGVVVSCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKGVQNEI 317

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            WG QIRSYV  PY MVKD RTN E  +   V+DGDLD F+ A L  
Sbjct: 318 AWGHQIRSYVFMPYTMVKDHRTNYETGNVDAVMDGDLDGFIFAYLKA 364


>gi|41409273|ref|NP_962109.1| peptide chain release factor 2 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41398093|gb|AAS05723.1| PrfB [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 373

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 162/356 (45%), Positives = 221/356 (62%), Gaps = 7/356 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R+  L  +  DP LW +   A+ +  E  H    +  I+E+
Sbjct: 15  LDSTLTTVERVLDVDGLRARIEKLEHEASDPQLWDDQARAQRVTSELSHAQGELRRIEEL 74

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSGEADSNDAYLE 120
           + RL D  +L ELA E+ + +       + +    + ++E  +  +LLSGE D  +A + 
Sbjct: 75  RARLDDLPVLYELAAEDGEGAAEALAEADAELKALRADIEATEVRTLLSGEYDEREALVT 134

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG 
Sbjct: 135 IRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGT 194

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG GG
Sbjct: 195 LSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGG 254

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL E   +KR E     +
Sbjct: 255 QSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKISAMRVLQAKLLE---RKRSEERAELD 311

Query: 301 SSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + K E G  WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +  +
Sbjct: 312 ALKGEGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWR 367


>gi|222085647|ref|YP_002544177.1| peptide chain release factor 2 [Agrobacterium radiobacter K84]
 gi|221723095|gb|ACM26251.1| peptide chain release factor 2 [Agrobacterium radiobacter K84]
          Length = 345

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 233/329 (70%), Positives = 283/329 (86%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           LN K+EDP+LW +  EA+ LMRERQ LD+ IS ++ ++ ++ DN+ L+EL  EE D  ++
Sbjct: 4   LNNKSEDPNLWNDATEAQKLMRERQQLDDGISGVRALEQQVADNVELIELGEEEGDADVV 63

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           +E  + L+ +K E   +Q E++LSGEADSND Y+EVH+GAGGTESQDWANMLLRMYTRWA
Sbjct: 64  REAEEALKALKTEAARRQVEAMLSGEADSNDTYVEVHSGAGGTESQDWANMLLRMYTRWA 123

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+++FK E LE+HDGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTS
Sbjct: 124 ERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTS 183

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FSSIW+YPVVDDSI+I+I+E DCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VVQCQQ
Sbjct: 184 FSSIWIYPVVDDSIQIDINEGDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQ 243

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQHKN+A+AW+MLRA++YE EL KREE AN   +SKT+IGWG QIRSYVLQPYQ+VKD
Sbjct: 244 ERSQHKNRAKAWDMLRARMYEAELMKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKD 303

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           LRT +  T+P DVLDGDL++FM+A LA +
Sbjct: 304 LRTGVTSTAPDDVLDGDLNEFMEAALAHR 332


>gi|254831068|ref|ZP_05235723.1| peptide chain release factor 2 [Listeria monocytogenes 10403S]
          Length = 327

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 168/325 (51%), Positives = 216/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP+ W +   A+ ++ E             +++      I LEL  EE D  + +E  
Sbjct: 1   MLDPNFWNDQQAAQKVINESNVYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLLRMY RW+EK+ 
Sbjct: 61  KDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S+
Sbjct: 121 FKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ
Sbjct: 181 DVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML+ KLY+ E +++E         + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLDDF+ A L  +
Sbjct: 301 YETGNIQAVMDGDLDDFINAYLRSR 325


>gi|254776429|ref|ZP_05217945.1| peptide chain release factor 2 [Mycobacterium avium subsp. avium
           ATCC 25291]
          Length = 370

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 163/356 (45%), Positives = 221/356 (62%), Gaps = 7/356 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R+  L  +  DP LW +   A+ +  E  H    +  I+E+
Sbjct: 12  LDSTLTTVERVLDVDGLRARIEKLEHEASDPQLWDDQARAQRVTSELSHAQGELRRIEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSGEADSNDAYLE 120
           + RL D  +L ELA EE + +       + +    + ++E  +  +LLSGE D  +A + 
Sbjct: 72  RARLDDLPVLYELAAEEGEGAAEALAEADAELKALRADIEATEVRTLLSGEYDEREALVT 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG 
Sbjct: 132 IRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGT 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG GG
Sbjct: 192 LSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL E   +KR E     +
Sbjct: 252 QSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKISAMRVLQAKLLE---RKRSEERAELD 308

Query: 301 SSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + K E G  WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +  +
Sbjct: 309 ALKGEGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWR 364


>gi|331266735|ref|YP_004326365.1| peptide chain release factor 2 [Streptococcus oralis Uo5]
 gi|326683407|emb|CBZ01025.1| peptide chain release factor 2 [Streptococcus oralis Uo5]
          Length = 325

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 152/325 (46%), Positives = 209/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L N  +  +++++   +  ILL+     +D S+  E  
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDF--LAEDESVHDELV 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  EQLTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|125717712|ref|YP_001034845.1| peptide chain release factor 2 [Streptococcus sanguinis SK36]
 gi|125497629|gb|ABN44295.1| Peptide chain release factor 2, putative [Streptococcus sanguinis
           SK36]
          Length = 325

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 149/325 (45%), Positives = 208/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L        ++ +   ++ ILL+     +D  +  E  
Sbjct: 1   MTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDF--LAEDELVQGELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  ++  +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  EKLAELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|251782076|ref|YP_002996378.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390705|dbj|BAH81164.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 331

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 148/328 (45%), Positives = 202/328 (61%), Gaps = 2/328 (0%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             +  +P  W + I A+ + ++   L +       +Q+   +  + LE+  E+D      
Sbjct: 2   EHQMTEPDFWNDNIAAQKISQKLNELKSTYETFHNMQELSDETELYLEMLEEDDSVKDDL 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E S       L          LS   D N+A LE+H G+GGTE+QDWA+ML RMYTR+  
Sbjct: 62  EASLETLGQILASYEMTLL--LSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGN 119

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF
Sbjct: 120 AKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSF 179

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
            S+ V P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +
Sbjct: 180 VSVEVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVD 239

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           R+Q+ N+ +A  ML+AKLY+LE +K+    N  +  K EI WG QIRSYV  PY MVKD 
Sbjct: 240 RTQYGNRDRAIKMLQAKLYQLEQEKKAAEVNALKGDKKEITWGSQIRSYVFTPYTMVKDH 299

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           RTN E      V+DGD++ F+ A L  +
Sbjct: 300 RTNYEVAQVDKVMDGDIEGFIDAYLKWR 327


>gi|227486869|ref|ZP_03917185.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227541969|ref|ZP_03972018.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227092943|gb|EEI28255.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227182412|gb|EEI63384.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 366

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 153/352 (43%), Positives = 218/352 (61%), Gaps = 3/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  L  +  + D D   +R   L     DP LW +   A+ +  +  H  + +  ++ +
Sbjct: 12  LSDTLTTIEKVLDLDALAERARELELTAADPTLWDDPTNAQKVTSDLSHTQSTLKKVRAL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  ++ EL   E++    +   D    ++  +E  + +++LSGE D  DA + + 
Sbjct: 72  RQRVDDLPVMYEL--AEEEGEGTELADDERADLRQAIESMEVQTMLSGEYDERDAVVTIR 129

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ DWA ML+RMY RWAEK   K +  +    EEAGIKSAT  +  P  YG L 
Sbjct: 130 SGAGGVDAADWAEMLMRMYIRWAEKEGHKVQVFDTSYAEEAGIKSATFQVSDPYMYGTLS 189

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+ +RR TSF+ + V PVV+ +  I+I +SD R+D YR+SG GGQ 
Sbjct: 190 VEQGTHRLVRISPFDNQARRQTSFAEVEVLPVVEKTDHIDIPDSDVRVDVYRSSGPGGQS 249

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV CQ E+SQ +N+A A  +L+++L E + Q+ +   +   + 
Sbjct: 250 VNTTDSAVRITHIPTGIVVTCQNEKSQIQNRASAMAVLQSRLLERKRQEEQAEMDALGAG 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             E  WG Q+RSYVL PYQMVKDLRTN E   PS VLDGD+D F++A +  +
Sbjct: 310 -GEASWGNQMRSYVLHPYQMVKDLRTNYEVGDPSKVLDGDIDGFLEAGIRWR 360


>gi|296089769|emb|CBI39588.3| unnamed protein product [Vitis vinifera]
          Length = 472

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 159/352 (45%), Positives = 231/352 (65%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++  ++ +     W   V RL  L+ +   P LW N + A  + RE   L   +  +K +
Sbjct: 110 IALSIHLIKKRLQWKKLVVRLDVLSAQLNKPDLWDNPVHAGKISREHGMLMGKMKGVKNL 169

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L +++ +++LA EE+D  +  E+   L  ++   + K+ E+LL+G+ DS   Y+EV 
Sbjct: 170 EQELLEHIDMVKLAREENDPELESESLKALLGMRRNSKEKELEALLAGDHDSCSCYIEVQ 229

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA M+++MY  WA++R +    ++   GE AGIK AT+ + G  ++G+ K
Sbjct: 230 AGAGGTESMDWAAMVMQMYKMWAQRRGYGVTVVDEMPGETAGIKRATIKVDGEYSFGYAK 289

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+DS  RRHTSF+++ V P+  D S  ++I+ESD RI+ +RA GAGGQ
Sbjct: 290 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDASSHVQINESDLRIERFRAGGAGGQ 349

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTT+SAVRI HIPTGV   CQ ERSQH+NKA A  +L+++L +LE+ ++ +I      
Sbjct: 350 HVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQLEISRQAQINAQHTQ 409

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           S T+I WG QIR+YVL PY+MVKDLRTN E + P  VL+GDLD F+ + L+ 
Sbjct: 410 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSA 461


>gi|148985895|ref|ZP_01818989.1| peptide chain release factor 2 [Streptococcus pneumoniae SP3-BS71]
 gi|148989834|ref|ZP_01821128.1| peptide chain release factor 2 [Streptococcus pneumoniae SP6-BS73]
 gi|149007634|ref|ZP_01831251.1| peptide chain release factor 2 [Streptococcus pneumoniae SP18-BS74]
 gi|149020396|ref|ZP_01835288.1| peptide chain release factor 2 [Streptococcus pneumoniae SP23-BS72]
 gi|147760789|gb|EDK67760.1| peptide chain release factor 2 [Streptococcus pneumoniae SP18-BS74]
 gi|147922041|gb|EDK73165.1| peptide chain release factor 2 [Streptococcus pneumoniae SP3-BS71]
 gi|147924776|gb|EDK75860.1| peptide chain release factor 2 [Streptococcus pneumoniae SP6-BS73]
 gi|147930698|gb|EDK81680.1| peptide chain release factor 2 [Streptococcus pneumoniae SP23-BS72]
 gi|301799772|emb|CBW32341.1| peptide chain release factor 2 [Streptococcus pneumoniae OXC141]
 gi|332077171|gb|EGI87633.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17545]
 gi|332203909|gb|EGJ17976.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47368]
          Length = 325

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 149/325 (45%), Positives = 204/325 (62%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L N  +   ++++   +  ILL+   E++         
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHDELVAQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
                    +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 61  LAELD--KIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|150396182|ref|YP_001326649.1| peptide chain release factor 2 [Sinorhizobium medicae WSM419]
 gi|150027697|gb|ABR59814.1| peptide chain release factor 2 [Sinorhizobium medicae WSM419]
          Length = 342

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 231/328 (70%), Positives = 279/328 (85%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
           N K EDP LW +  EA+ LMRERQ LD+ IS ++  + +L DN+ L+EL  EE D +I+ 
Sbjct: 2   NNKAEDPSLWNDAAEAQKLMRERQQLDDGISGLRRFEQQLNDNIELIELGEEEGDSAIVS 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E  + L++++ +   KQ E++LSGEAD ND Y+EVH+GAGGTESQDWANMLLRMYTRWAE
Sbjct: 62  EAEEALRQLRNDAAKKQVEAMLSGEADQNDTYVEVHSGAGGTESQDWANMLLRMYTRWAE 121

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           ++ +K E +EI DGEEAGIKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSF
Sbjct: 122 RQGYKVELMEIQDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSF 181

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           SSIWVYPVVD+SI+++I+ESDCRIDTYR+SGAGGQHVNTTDSAVRITH+P+G+VVQCQQE
Sbjct: 182 SSIWVYPVVDESIQVDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHMPSGIVVQCQQE 241

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQHKN+A+AW+MLRA+LYE EL+KREE AN   +SKTEIGWG QIRSYVLQPYQ+VKDL
Sbjct: 242 RSQHKNRAKAWDMLRARLYEAELKKREEAANAEAASKTEIGWGHQIRSYVLQPYQLVKDL 301

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           RT +E TSP DVLDG+L +FM+A LA +
Sbjct: 302 RTGVESTSPGDVLDGELSEFMEAALAHR 329


>gi|332654908|ref|ZP_08420650.1| peptide chain release factor 2 [Ruminococcaceae bacterium D16]
 gi|332516251|gb|EGJ45859.1| peptide chain release factor 2 [Ruminococcaceae bacterium D16]
          Length = 373

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 158/352 (44%), Positives = 229/352 (65%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+  L  LG   D ++A + L  L  ++     W N+ +A+ + +  + L   +    + 
Sbjct: 14  LAPTLEKLGQALDLESAERELDMLQAESAADGFWNNLEKAQKVQQRIKTLQTKVDKHHKR 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D + L E+  E +D S++ E  +    ++ E+E  + ++LL+GE DS++  L +H
Sbjct: 74  KQHWDDLMALCEMGNEFEDESLVPELEEGYAALEEEMEEARLQTLLTGEYDSSNVILTIH 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTE+QDWA ML RMYTRW E+  F  + ++  DG+EAGIKSAT++I+G NAYG+L+
Sbjct: 134 PGAGGTEAQDWAQMLYRMYTRWTERHGFTYQIMDYQDGDEAGIKSATIMIEGENAYGYLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SP+D+N+RR TSF+S+ V P + + +E+EI   D  +  YRASGAGGQH
Sbjct: 194 GEHGVHRLVRVSPFDANARRQTSFASVEVMPDLPEDVEVEIRPEDIEMQVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T SAVR+ H PTG+VV  QQERSQ +NK     MLRAKL EL++Q++ E  +  +  
Sbjct: 254 VNKTSSAVRLIHKPTGIVVASQQERSQFQNKDNCMKMLRAKLVELQMQEKAEKISDLKGV 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + +I WG QIRSYV  PYQ+VKD RT  E ++   V+DG+LD F+ A L  +
Sbjct: 314 QLKIEWGSQIRSYVFMPYQLVKDNRTAYETSNIGAVMDGELDGFINAYLTAE 365


>gi|228474266|ref|ZP_04059001.1| peptide chain release factor 2 [Staphylococcus hominis SK119]
 gi|314936947|ref|ZP_07844294.1| peptide chain release factor 2 [Staphylococcus hominis subsp.
           hominis C80]
 gi|228271625|gb|EEK12972.1| peptide chain release factor 2 [Staphylococcus hominis SK119]
 gi|313655566|gb|EFS19311.1| peptide chain release factor 2 [Staphylococcus hominis subsp.
           hominis C80]
          Length = 332

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 160/326 (49%), Positives = 218/326 (66%), Gaps = 1/326 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
              +P  W N  +A+ ++ +   L + ++   E+  +L D     EL  EE D  I ++ 
Sbjct: 1   MMTEPDFWDNQNKAQDVIDKNNALKSIVNGYYELNHKLEDMDATWELLQEEYDDEIKEDL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
             ++   + +++  + + LL G  D+N+A LE+H GAGGTESQDWA+MLLRMY R+ E++
Sbjct: 61  EQDIVSFREQIDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYGEQQ 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E ++   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S
Sbjct: 121 GFKIETIDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180

Query: 209 IWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
             V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ER
Sbjct: 181 CDVIPEFDNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KN+  A  ML++KLY+L+L+++E         + EIGWG QIRSYV  PY MVKD R
Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAI 353
           TN E      V+DGD+  F++A L  
Sbjct: 301 TNEETAKVDAVMDGDIAPFIEAYLRQ 326


>gi|289168241|ref|YP_003446510.1| peptide chain release factor 2 [Streptococcus mitis B6]
 gi|288907808|emb|CBJ22648.1| peptide chain release factor 2 [Streptococcus mitis B6]
          Length = 325

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 152/325 (46%), Positives = 208/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L N  +   ++++   +  ILL+     +D S+ +E  
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDF--LAEDESVHEELV 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  TQLSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|152967725|ref|YP_001363509.1| peptide chain release factor 2 [Kineococcus radiotolerans SRS30216]
 gi|226726318|sp|A6WEK6|RF2_KINRD RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|151362242|gb|ABS05245.1| peptide chain release factor 2 [Kineococcus radiotolerans SRS30216]
          Length = 367

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 150/353 (42%), Positives = 220/353 (62%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L      +  + D D   + L+ LN +   P LW +   A+ +      +   +  I+++
Sbjct: 12  LRTTYASIREVSDLDALRKELADLNDEAAAPSLWDDPEHAQTVTSRLSAVQAELDRIEKM 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             R+ D  +L+EL+ +E D   L E    L  +K ++   +  +LLSGE DS +A + + 
Sbjct: 72  GGRIDDLEVLVELSEDEHDADSLAEAETELNEVKEQLAQLEVRTLLSGEYDSREAIVTIR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A ML+RMY RWAE+R +K+E  +    EEAGIKSAT  +  P AYG L 
Sbjct: 132 SEAGGVDAADFAEMLMRMYLRWAERRGYKSEVYDTSYAEEAGIKSATFKVAAPYAYGTLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV ++  +++ E++ R+D YR+SG GGQ 
Sbjct: 192 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVAETDHVDVPENEVRVDVYRSSGPGGQS 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ E+SQ +NKA A  +L+AKL E   + R+   +  +  
Sbjct: 252 VNTTDSAVRLTHLPTGIVVTCQNEKSQLQNKAAAMRVLQAKLLEKARKDRQAELDALKGD 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +   WG Q+RSYVL PYQMVKDLRTN E  + S + DG++D F++A +  +K
Sbjct: 312 DS-GSWGNQMRSYVLHPYQMVKDLRTNYEVGNTSSIFDGEIDSFLEAGIRWRK 363


>gi|269925864|ref|YP_003322487.1| bacterial peptide chain release factor 2 (bRF- 2) [Thermobaculum
           terrenum ATCC BAA-798]
 gi|269789524|gb|ACZ41665.1| bacterial peptide chain release factor 2 (bRF- 2) [Thermobaculum
           terrenum ATCC BAA-798]
          Length = 372

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 161/351 (45%), Positives = 224/351 (63%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +++      D +N    +  L  +     LW +  EA+ +M+    L + +    +I
Sbjct: 12  LRERISTFKEHLDLENKRLEIEKLEQRAASSELWADPAEAQKVMKNLNDLKDQLEVWSKI 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +LL+LA EED  S   E +  ++ ++ ++ + + E LLSG  D  DA + +H
Sbjct: 72  ERRLEDAEVLLDLAYEEDSASDFHEAASQIRALENQLNHLELELLLSGSYDQEDAIIAIH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A  GG ++QDWA+ML+RMY RWA++R ++ E +   +GEEAG KSAT+ IKG  AYG+ K
Sbjct: 132 AREGGIDAQDWASMLVRMYLRWAQRRGWQAELVSSIEGEEAGYKSATIEIKGKYAYGYAK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVR+SP+D   RRHTSF+ + V P V+++ E++I E D +IDTYRAS AGGQH
Sbjct: 192 AEAGQHRLVRLSPFDQAHRRHTSFALVEVLPDVEETPEVQIREEDLKIDTYRASSAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T SAVRITHIPTG+VV CQ ERSQ +NK  A  +LRA+L ELEL+++ E     +  
Sbjct: 252 VNKTSSAVRITHIPTGIVVTCQNERSQFQNKETALKILRARLLELELRRQAEEQARLKGE 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
               GWG QIRSYVL PY MVKD RT  E +    VLDG++D F++A L+ 
Sbjct: 312 HIATGWGSQIRSYVLHPYTMVKDHRTGYEVSDVESVLDGEIDPFIEAYLSQ 362


>gi|223940442|ref|ZP_03632294.1| peptide chain release factor 2 [bacterium Ellin514]
 gi|223890887|gb|EEF57396.1| peptide chain release factor 2 [bacterium Ellin514]
          Length = 384

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 154/354 (43%), Positives = 216/354 (61%), Gaps = 3/354 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+R     GG FD  N  +RL  L++       W N  +A+ L+ E   L   +  + + 
Sbjct: 16  LARNWPTYGGFFDVANVQKRLGELDSLMAGESFWSNRDQAQKLIDESNSLRKKVEPLLKA 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETS---DNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + +L D  +++ELA  E      +  +     L     E+E  + +  L+G  D N+  L
Sbjct: 76  EKQLEDYKVMIELAEAEPAAEQEKYQNDVDRELVVFNKELENLELKVFLNGPHDKNNCIL 135

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            ++AGAGGTES DWANMLLRMY RWAE R ++ E  +   GE AGIKSATLLI G NAYG
Sbjct: 136 SINAGAGGTESCDWANMLLRMYQRWAELRGWQVEVTDALPGETAGIKSATLLISGENAYG 195

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           + K E+GVHRLVRISP+DSN RRHTSF+S+     +++  EI I  ++  +DT+R+ G G
Sbjct: 196 FCKAERGVHRLVRISPFDSNKRRHTSFASVDAIAEIEEEGEIAIPPNEFHVDTFRSGGKG 255

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ+VN  ++AVRITHIPTG+VV  Q +RSQH+N+A A  +L ++++   L  +++     
Sbjct: 256 GQNVNKVETAVRITHIPTGLVVASQTQRSQHQNRATAMKLLLSRIFAQRLDAQKQEMERF 315

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
              K  + WG QIRSYV QPY+MVKDLRT +E +    V+DGDLD ++   L  
Sbjct: 316 YGEKGSVSWGNQIRSYVFQPYRMVKDLRTGVETSDVQGVMDGDLDPYVNGWLRA 369


>gi|260655334|ref|ZP_05860822.1| peptide chain release factor 2 [Jonquetella anthropi E3_33 E1]
 gi|260629782|gb|EEX47976.1| peptide chain release factor 2 [Jonquetella anthropi E3_33 E1]
          Length = 348

 Score =  257 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 165/349 (47%), Positives = 219/349 (62%), Gaps = 1/349 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +      FD +   ++   L  ++ DP  W    +AK +  +   L++++     ++   
Sbjct: 1   MRTCRTAFDPEGLRRQADELRLRSSDPAFWS-TGDAKEVSSQLSRLESSLEHWDHLERMF 59

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   + EL   +DD  +  E          EVE++Q + LLS   DS DA + +HAG+G
Sbjct: 60  SDLETMAELLEIDDDPELAAEFDAKSGEYSREVEHRQMDLLLSEAYDSRDAIVTIHAGSG 119

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G +SQDWA ML RMY RW E+  +KT  L++   EEAG+KS T  + G  AYG+LK E G
Sbjct: 120 GLDSQDWAEMLYRMYLRWCEENGYKTRLLDLQQDEEAGLKSVTFTVSGSCAYGYLKSETG 179

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+D+N RRHTSFS + V P + D +E+ I + D RIDTYR+SGAGGQHVN T
Sbjct: 180 VHRLVRISPFDTNKRRHTSFSGVVVSPQLPDDVEVAIRDEDLRIDTYRSSGAGGQHVNMT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTG+VV CQ ERSQH NKA A  +LR+KLY+L++Q R +  +     K E 
Sbjct: 240 DSAVRITHLPTGIVVSCQNERSQHMNKATAMQVLRSKLYDLQVQNRRQELDDLAGEKKES 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            WG QIRSYVLQPY +VKD RT  E  + + VLDGDLD F+ A L  +K
Sbjct: 300 SWGHQIRSYVLQPYTLVKDHRTGEETGNVAAVLDGDLDRFILAYLRWRK 348


>gi|295836903|ref|ZP_06823836.1| peptide chain release factor 2 [Streptomyces sp. SPB74]
 gi|295826265|gb|EFG64762.1| peptide chain release factor 2 [Streptomyces sp. SPB74]
          Length = 371

 Score =  257 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 155/353 (43%), Positives = 216/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D     + ++ L  +   P LW +   A+ +  +  HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLGKMREDIASLEEQAAAPSLWDDPDAAQKITSKLSHLQAEVRKAEGL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA +E D    +E    L  ++  ++  +  +LLSGE DS +A + + 
Sbjct: 73  RGRIDDLGVLFELAADEGDADTQEEAEQELAAVRKALDEMEVRTLLSGEYDSREAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  +  P AYG L 
Sbjct: 133 AEAGGVDASDFAERLQRMYLRWAERLGYKTELYETSYAEEAGIKSTTFAVHTPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +E  N  +  
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQEKMNALKGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 313 GGN-SWGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWRK 364


>gi|312862769|ref|ZP_07723009.1| peptide chain release factor 2 [Streptococcus vestibularis F0396]
 gi|311101629|gb|EFQ59832.1| peptide chain release factor 2 [Streptococcus vestibularis F0396]
          Length = 337

 Score =  257 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 152/336 (45%), Positives = 214/336 (63%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L  +  +P  W + I A+   +E   L         +Q+   +    L L + 
Sbjct: 1   MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMQELSDETE--LYLEML 58

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E+D SI +E  + L+++   +   +   LLS   D N+A LE+H G+GGTE+QDWA+MLL
Sbjct: 59  EEDDSIQEELEETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLL 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY R+   + FK E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS
Sbjct: 119 RMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSF+S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG
Sbjct: 179 AKRRHTSFTSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY++E +K+ E  N  +  K EI WG QIRSYV  
Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RT  E      V+DGD++ F+ A L  +
Sbjct: 299 PYTMVKDHRTGYEVAQVDKVMDGDIEGFIDACLKWR 334


>gi|227552028|ref|ZP_03982077.1| peptide chain release factor 2 [Enterococcus faecium TX1330]
 gi|257879881|ref|ZP_05659534.1| peptide chain release factor 2 [Enterococcus faecium 1,230,933]
 gi|257882725|ref|ZP_05662378.1| peptide chain release factor 2 [Enterococcus faecium 1,231,502]
 gi|257884039|ref|ZP_05663692.1| peptide chain release factor 2 [Enterococcus faecium 1,231,501]
 gi|257890396|ref|ZP_05670049.1| peptide chain release factor 2 [Enterococcus faecium 1,231,410]
 gi|257895380|ref|ZP_05675033.1| peptide chain release factor 2 [Enterococcus faecium Com12]
 gi|257897991|ref|ZP_05677644.1| peptide chain release factor 2 [Enterococcus faecium Com15]
 gi|260559609|ref|ZP_05831789.1| peptide chain release factor 2 [Enterococcus faecium C68]
 gi|261208674|ref|ZP_05923111.1| peptide chain release factor 2 [Enterococcus faecium TC 6]
 gi|289566068|ref|ZP_06446505.1| peptide chain release factor 2 [Enterococcus faecium D344SRF]
 gi|293378249|ref|ZP_06624418.1| peptide chain release factor 2 [Enterococcus faecium PC4.1]
 gi|293556398|ref|ZP_06674979.1| peptide chain release factor 2 [Enterococcus faecium E1039]
 gi|293560376|ref|ZP_06676869.1| peptide chain release factor 2 [Enterococcus faecium E1162]
 gi|293568705|ref|ZP_06680020.1| peptide chain release factor 2 [Enterococcus faecium E1071]
 gi|293572408|ref|ZP_06683388.1| peptide chain release factor 2 [Enterococcus faecium E980]
 gi|294616268|ref|ZP_06696061.1| peptide chain release factor 2 [Enterococcus faecium E1636]
 gi|294617600|ref|ZP_06697230.1| peptide chain release factor 2 [Enterococcus faecium E1679]
 gi|294622340|ref|ZP_06701373.1| peptide chain release factor 2 [Enterococcus faecium U0317]
 gi|314939593|ref|ZP_07846820.1| peptide chain release factor 2 [Enterococcus faecium TX0133a04]
 gi|314941219|ref|ZP_07848115.1| peptide chain release factor 2 [Enterococcus faecium TX0133C]
 gi|314948616|ref|ZP_07851991.1| peptide chain release factor 2 [Enterococcus faecium TX0082]
 gi|314953358|ref|ZP_07856285.1| peptide chain release factor 2 [Enterococcus faecium TX0133A]
 gi|314993437|ref|ZP_07858802.1| peptide chain release factor 2 [Enterococcus faecium TX0133B]
 gi|314995786|ref|ZP_07860875.1| peptide chain release factor 2 [Enterococcus faecium TX0133a01]
 gi|227178781|gb|EEI59753.1| peptide chain release factor 2 [Enterococcus faecium TX1330]
 gi|257814109|gb|EEV42867.1| peptide chain release factor 2 [Enterococcus faecium 1,230,933]
 gi|257818383|gb|EEV45711.1| peptide chain release factor 2 [Enterococcus faecium 1,231,502]
 gi|257819877|gb|EEV47025.1| peptide chain release factor 2 [Enterococcus faecium 1,231,501]
 gi|257826756|gb|EEV53382.1| peptide chain release factor 2 [Enterococcus faecium 1,231,410]
 gi|257831945|gb|EEV58366.1| peptide chain release factor 2 [Enterococcus faecium Com12]
 gi|257835903|gb|EEV60977.1| peptide chain release factor 2 [Enterococcus faecium Com15]
 gi|260074277|gb|EEW62599.1| peptide chain release factor 2 [Enterococcus faecium C68]
 gi|260077176|gb|EEW64896.1| peptide chain release factor 2 [Enterococcus faecium TC 6]
 gi|289162175|gb|EFD10038.1| peptide chain release factor 2 [Enterococcus faecium D344SRF]
 gi|291588665|gb|EFF20498.1| peptide chain release factor 2 [Enterococcus faecium E1071]
 gi|291590782|gb|EFF22498.1| peptide chain release factor 2 [Enterococcus faecium E1636]
 gi|291596206|gb|EFF27469.1| peptide chain release factor 2 [Enterococcus faecium E1679]
 gi|291598167|gb|EFF29266.1| peptide chain release factor 2 [Enterococcus faecium U0317]
 gi|291601465|gb|EFF31736.1| peptide chain release factor 2 [Enterococcus faecium E1039]
 gi|291605664|gb|EFF35105.1| peptide chain release factor 2 [Enterococcus faecium E1162]
 gi|291607470|gb|EFF36812.1| peptide chain release factor 2 [Enterococcus faecium E980]
 gi|292643113|gb|EFF61254.1| peptide chain release factor 2 [Enterococcus faecium PC4.1]
 gi|313590058|gb|EFR68903.1| peptide chain release factor 2 [Enterococcus faecium TX0133a01]
 gi|313592102|gb|EFR70947.1| peptide chain release factor 2 [Enterococcus faecium TX0133B]
 gi|313594634|gb|EFR73479.1| peptide chain release factor 2 [Enterococcus faecium TX0133A]
 gi|313599943|gb|EFR78786.1| peptide chain release factor 2 [Enterococcus faecium TX0133C]
 gi|313641133|gb|EFS05713.1| peptide chain release factor 2 [Enterococcus faecium TX0133a04]
 gi|313644947|gb|EFS09527.1| peptide chain release factor 2 [Enterococcus faecium TX0082]
          Length = 327

 Score =  257 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 162/324 (50%), Positives = 220/324 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W +   A+ ++ E             + + L +  +++E+  EE D ++ +E  
Sbjct: 1   MAEPGFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVEMLQEEPDAAMQEEAE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             +  +  +++  +   LL G  D N+A +E+H GAGGTESQDW +MLLRMYTRWAE+  
Sbjct: 61  TRINALDEKMKTYELSMLLDGPYDRNNAIVELHPGAGGTESQDWGSMLLRMYTRWAEQHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           ++ E L+   G+EAGIKS TLLIKG NA+G+LK E+GVHRLVRISP+DS  RRHTSF S+
Sbjct: 121 YQVETLDYQAGDEAGIKSVTLLIKGHNAFGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D++I+IEI+  D +IDTYRASGAGGQH+N T+SAVRITH+PTG VV  Q +RSQ
Sbjct: 181 DVMPELDETIDIEINPDDLKIDTYRASGAGGQHINKTESAVRITHLPTGTVVASQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML+AKLY+LE++K+E+ A      + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
           +E  +   V+DGDLD F+   L +
Sbjct: 301 VETGNVQAVMDGDLDLFIDGYLKM 324


>gi|254432093|ref|ZP_05045796.1| peptide chain release factor 2 [Cyanobium sp. PCC 7001]
 gi|197626546|gb|EDY39105.1| peptide chain release factor 2 [Cyanobium sp. PCC 7001]
          Length = 358

 Score =  257 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 144/341 (42%), Positives = 206/341 (60%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      R   L      P  W +   A+  MR+   +   +  ++  +  + D  
Sbjct: 3   RTVFDVPALKARQQDLEQLASQPDFWDDQQAAQKQMRQLDDVKAQLEQLERWKAAVSDAE 62

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             LEL   E D  +L+E +  L  ++ +++  + E LLSG  D   A L ++AGAGGT++
Sbjct: 63  ATLELHELEPDGDLLEEANAGLTSLRGDLDRWELERLLSGPYDKEGAVLTINAGAGGTDA 122

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRWAE         E+ +GEEAGIKSAT+ I+G  AYG+L+ E+G HRL
Sbjct: 123 QDWAQMLLRMYTRWAEDHGMTVSVDELSEGEEAGIKSATIEIEGRYAYGYLRNEKGTHRL 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+++N +R TSF+ + V P +++ ++++I + D  I T R+ GAGGQ+VN  ++AV
Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKIEEEVKLDIPDKDLEITTSRSGGAGGQNVNKVETAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI HIPTG+ V+C QERSQ +NK +A  +L AKL  +  ++R            E  WG 
Sbjct: 243 RILHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIR+YV  PYQ+VKDLRT  E T    V+DGDLD F+++ L
Sbjct: 303 QIRNYVFHPYQLVKDLRTQHETTDVQGVMDGDLDPFIQSLL 343


>gi|19745741|ref|NP_606877.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS8232]
 gi|50913897|ref|YP_059869.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS10394]
 gi|71903175|ref|YP_279978.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS6180]
 gi|94988152|ref|YP_596253.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS9429]
 gi|94990034|ref|YP_598134.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS10270]
 gi|94992039|ref|YP_600138.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS2096]
 gi|94993945|ref|YP_602043.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS10750]
 gi|306827732|ref|ZP_07461004.1| peptide chain release factor RF2 [Streptococcus pyogenes ATCC
           10782]
 gi|19747880|gb|AAL97376.1| putative peptide chain release factor 2 [Streptococcus pyogenes
           MGAS8232]
 gi|50902971|gb|AAT86686.1| Bacterial Peptide Chain Release Factor 2 [Streptococcus pyogenes
           MGAS10394]
 gi|71802270|gb|AAX71623.1| bacterial peptide chain release factor 2 [Streptococcus pyogenes
           MGAS6180]
 gi|94541660|gb|ABF31709.1| bacterial peptide chain release factor 2 (RF-2) [Streptococcus
           pyogenes MGAS9429]
 gi|94543542|gb|ABF33590.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Streptococcus
           pyogenes MGAS10270]
 gi|94545547|gb|ABF35594.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Streptococcus
           pyogenes MGAS2096]
 gi|94547453|gb|ABF37499.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Streptococcus
           pyogenes MGAS10750]
 gi|304430050|gb|EFM33087.1| peptide chain release factor RF2 [Streptococcus pyogenes ATCC
           10782]
          Length = 337

 Score =  257 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 149/336 (44%), Positives = 213/336 (63%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L     +P  W + I A+   +E   L         +Q+   +  +LLE+  E
Sbjct: 1   MEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +D   + +E  +NL ++   +   +   LLS   D N+A LE+H G+GGTE+QDW ++LL
Sbjct: 61  DDS--LKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLL 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTR+     FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS
Sbjct: 119 RMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG
Sbjct: 179 AKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  
Sbjct: 239 IVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN E      V+DG+++ F+ A L  +
Sbjct: 299 PYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 334


>gi|330836506|ref|YP_004411147.1| bacterial peptide chain release factor 2 (bRF-2) [Spirochaeta
           coccoides DSM 17374]
 gi|329748409|gb|AEC01765.1| bacterial peptide chain release factor 2 (bRF-2) [Spirochaeta
           coccoides DSM 17374]
          Length = 369

 Score =  257 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 163/353 (46%), Positives = 226/353 (64%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++  +   +    D     +++  L  KT  P  W +  +A+    +   L ++    ++
Sbjct: 11  EIKEEAYTVWRRLDSTGIEKQIQELEAKTTLPDFWNDKEKAEKTFSDLSSLKDSFFPWRD 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ R+ D   L++L   EDD S++QE    +  I+ E    + ++LLS   D ND +L +
Sbjct: 71  LKKRIDDVGDLIDLYANEDDESLVQELDSQILDIEKEFHPLKVKTLLSQRFDKNDCFLSI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGTE+ DWA ML+RMY RW E+  FK+E L++ + +E GIKS T+ + G  A+G+L
Sbjct: 131 HAGAGGTEASDWAAMLMRMYLRWCERNGFKSEILDMQE-DEGGIKSTTIRVSGQYAFGYL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE GVHRLVRISP+DS  RRHTSF+S++  PV+DD IEI+I   D R+DTYRA GAGGQ
Sbjct: 190 KGEAGVHRLVRISPFDSQKRRHTSFTSVYASPVIDDEIEIDIKPEDIRLDTYRAGGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITH  +G+VVQCQ ERSQ  NK  A+ MLR++LYE   +K+E+       
Sbjct: 250 HVNKTDSAVRITHFESGIVVQCQNERSQFMNKEVAFKMLRSRLYEYYKEKQEQEHQKTAI 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +K  I WG QIRSYV QPY MVKD RTN +  +   V+DGD+DDF++  L   
Sbjct: 310 AKKGITWGSQIRSYVFQPYTMVKDHRTNCQVGNIQAVMDGDIDDFIEQFLQWD 362


>gi|293365065|ref|ZP_06611782.1| peptide chain release factor RF2 [Streptococcus oralis ATCC 35037]
 gi|307702226|ref|ZP_07639186.1| peptide chain release factor 2 [Streptococcus oralis ATCC 35037]
 gi|291316515|gb|EFE56951.1| peptide chain release factor RF2 [Streptococcus oralis ATCC 35037]
 gi|307624239|gb|EFO03216.1| peptide chain release factor 2 [Streptococcus oralis ATCC 35037]
          Length = 325

 Score =  257 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 149/325 (45%), Positives = 205/325 (63%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L N  +  +++++   +  ILL+   E++         
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVHDELVEQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
                +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 61  LTELDM--MMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|259506494|ref|ZP_05749396.1| peptide chain release factor 2 [Corynebacterium efficiens YS-314]
 gi|259165914|gb|EEW50468.1| peptide chain release factor 2 [Corynebacterium efficiens YS-314]
          Length = 387

 Score =  257 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 155/353 (43%), Positives = 217/353 (61%), Gaps = 3/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + + +    R+  L  +  DP LW N   A+ +  E  H+   +  + E
Sbjct: 31  ELDSTLTTIEKILNPEELSDRVRELEAQAADPGLWDNPDHAQQVTSELSHVQAELRKVTE 90

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  I+ EL   E++        + L  ++  VE  + +++LSGE D+ +A + +
Sbjct: 91  LRQRLDDLPIMYEL--AEEEGDDTSLVDEELADLRTGVEALEVKTMLSGEYDAREAVINI 148

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMY RWAEK   K +  +I   EEAGIKSAT ++ G   YG L
Sbjct: 149 RSGAGGVDAADWAEMLMRMYIRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGDYMYGQL 208

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ + V PVV+    I+I +S+ R+D YR+SG GGQ
Sbjct: 209 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQVDSIDIPDSEVRVDVYRSSGPGGQ 268

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E + Q+     +   +
Sbjct: 269 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKRQEERAEMDALGA 328

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                 WG Q+RSYVL PYQMVKDLRTN E   PS VLDGD+D  ++A +  +
Sbjct: 329 G-GNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDIDGLLEAGIRWR 380


>gi|226365870|ref|YP_002783653.1| peptide chain release factor 2 [Rhodococcus opacus B4]
 gi|254790919|sp|C1B1L3|RF2_RHOOB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|226244360|dbj|BAH54708.1| peptide chain release factor 2 [Rhodococcus opacus B4]
          Length = 368

 Score =  257 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 153/355 (43%), Positives = 223/355 (62%), Gaps = 6/355 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +   +R+  L  +  DP LW +   A+ +  +  H    +  ++E
Sbjct: 11  ELDTTLRTVESVLDVEELRRRIDELEHQAADPELWNDQEHAQQVTSQLSHSQAELRRVEE 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  +L ELA + +    + +       ++ ++   + +++LSGE D  DA + +
Sbjct: 71  LRTRLDDMPVLYELAED-EGAEAIADADAERHSLREDIAAMEVKTMLSGEYDERDALVNI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMY RWAEK  +  E  +    EEAGIKSAT  +K P +YG L
Sbjct: 130 RSGAGGVDAADWAEMLMRMYIRWAEKHGYGVEVYDTSYAEEAGIKSATFAVKAPYSYGTL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+ + V PVV+ +  I+++E+D R+D YR+SG GGQ
Sbjct: 190 SVEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIDVNENDVRVDVYRSSGPGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL E+   KR+E     ++
Sbjct: 250 SVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLEV---KRKEERAEMDA 306

Query: 302 SKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K + G  WG Q+RSYVL PYQMVKDLRT  E  +PS VLDGD+D F+++ +  +
Sbjct: 307 LKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVNNPSSVLDGDIDGFLESGIRWR 361


>gi|307708908|ref|ZP_07645368.1| peptide chain release factor 2 [Streptococcus mitis SK564]
 gi|307620244|gb|EFN99360.1| peptide chain release factor 2 [Streptococcus mitis SK564]
          Length = 325

 Score =  257 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 149/325 (45%), Positives = 204/325 (62%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L N  +   ++++   +  ILL+   E++         
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVQEELVAQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
                    +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 61  LAELD--KMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|301801602|emb|CBW34300.1| peptide chain release factor 2 [Streptococcus pneumoniae INV200]
          Length = 325

 Score =  257 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 148/325 (45%), Positives = 205/325 (63%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+ + +E   L N  +   ++++   +  ILL+   E++         
Sbjct: 1   MTEPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHDELVAQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
                    +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 61  LAELD--KIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+T+IPTG+VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|260436566|ref|ZP_05790536.1| peptide chain release factor 2 [Synechococcus sp. WH 8109]
 gi|260414440|gb|EEX07736.1| peptide chain release factor 2 [Synechococcus sp. WH 8109]
          Length = 356

 Score =  257 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 150/344 (43%), Positives = 206/344 (59%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L  +FD      R   L      P  W +   A+  MR    +   +S +   +  + D 
Sbjct: 2   LRTVFDVPALNARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAQLSQLAGWRGAVDDA 61

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              LEL   + D  +LQE  + L +++  ++  + E LLSGE D   A L ++AGAGGT+
Sbjct: 62  QATLELYELDPDEDLLQEAQNGLNQLRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTD 121

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA MLLRMYTRWAE    K    E+ +GEEAGIKS T+ I+G  AYG+L+ E+G HR
Sbjct: 122 AQDWAQMLLRMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHR 181

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+++N +R TSF+ + V P +++ ++++I E D  I T R+ GAGGQ+VN  ++A
Sbjct: 182 LVRISPFNANDKRQTSFAGVEVMPKIEEDVKLDIPEKDLEITTSRSGGAGGQNVNKVETA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRI HIPTG+ V+C QERSQ +NK +A  +L AKL  +  ++R            E  WG
Sbjct: 242 VRILHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWG 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIR+YV QPYQMVKDLRTN E      V+DG LD F+ A L  
Sbjct: 302 NQIRNYVFQPYQMVKDLRTNEETNDVQAVMDGALDPFIDACLRQ 345


>gi|297562654|ref|YP_003681628.1| peptide chain release factor 2 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296847102|gb|ADH69122.1| peptide chain release factor 2 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 372

 Score =  257 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 220/353 (62%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+  L  +  + D +    +++ L  ++ DP LW +   A+ + R+   L++ ++ I  I
Sbjct: 13  LAATLASVSAVLDLEAMHTQIAELREQSADPELWADQDNAQKVTRQLSSLESMVNKINGI 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             RL D  +L ELA  EDD     E    L +++ E+   +  +LL+G  D  +A + ++
Sbjct: 73  GQRLDDLGVLYELAEAEDDADTRVEADRELDQLRKEIGELEVRTLLNGPHDEREAIVTIN 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ DWA ML RMY RWAE+  + T+  E    EEAGIKS +  +K P AYG L+
Sbjct: 133 SQAGGVDAADWAQMLQRMYLRWAERHGYPTDVYETSYAEEAGIKSTSFAVKTPFAYGTLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE G HRLVRISP+D+ +RR TSF+ + V PVV+ S  IEI + D R+D YR+SG GGQ 
Sbjct: 193 GEHGTHRLVRISPFDNQNRRQTSFAGVDVVPVVEQSDHIEIDDGDLRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A +ML+AKL   + ++ +   +     
Sbjct: 253 VNTTDSAVRITHLPTGIVVSCQNERSQLQNKATAMSMLQAKLLARKREEEQAALDEIRGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +   WG Q+R+YVL PYQ VKD+RT  E  + S VLDGD+D+F+ A +   +
Sbjct: 313 -SVSSWGTQMRNYVLHPYQSVKDVRTGAETGNTSGVLDGDIDEFIDAEIRWMR 364


>gi|194468150|ref|ZP_03074136.1| peptide chain release factor 2 [Lactobacillus reuteri 100-23]
 gi|194453003|gb|EDX41901.1| peptide chain release factor 2 [Lactobacillus reuteri 100-23]
          Length = 332

 Score =  257 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 156/325 (48%), Positives = 211/325 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +  +A+ ++ E   L         ++D++ D    +EL   E D  + ++  
Sbjct: 1   MAQPDFWNDNEQAQKVIAENNILKEKRDTFVNLRDQIGDLETSIELLTVEPDDDLQRDFE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +  + +  +E  +   LL GE D+ +A LE+H GAGGTE+QDW  MLLRMY RW E+  
Sbjct: 61  VSFTKTQKALEQYRLTQLLDGEYDAKNAILEIHPGAGGTEAQDWGEMLLRMYVRWGEQHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E      G+EAGIKS TLLIKG NA+G+L+ E+GVHRLVRISP+D+  RRHTSF+S+
Sbjct: 121 FSVETASYEAGDEAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDAAGRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDS+E++I  SD R+DT+R+SGAGGQH+N  +SAVRITHIPTG+V   Q ERSQ
Sbjct: 181 DVMPELDDSVEVDIDPSDLRVDTFRSSGAGGQHINKIESAVRITHIPTGIVTSSQAERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A NML++KLYELE +K+ +     E  + +IGWG QIRSYV  PY +VKD RT 
Sbjct: 241 LQNRVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLDIGWGSQIRSYVFHPYTLVKDNRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  K
Sbjct: 301 YETHNGQAVMDGDLDPFIDAFLQWK 325


>gi|25027367|ref|NP_737421.1| peptide chain release factor 2 [Corynebacterium efficiens YS-314]
 gi|23492648|dbj|BAC17621.1| putative translation releasing factor RF-2 [Corynebacterium
           efficiens YS-314]
          Length = 389

 Score =  257 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 155/353 (43%), Positives = 217/353 (61%), Gaps = 3/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + + +    R+  L  +  DP LW N   A+ +  E  H+   +  + E
Sbjct: 33  ELDSTLTTIEKILNPEELSDRVRELEAQAADPGLWDNPDHAQQVTSELSHVQAELRKVTE 92

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  I+ EL   E++        + L  ++  VE  + +++LSGE D+ +A + +
Sbjct: 93  LRQRLDDLPIMYEL--AEEEGDDTSLVDEELADLRTGVEALEVKTMLSGEYDAREAVINI 150

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMY RWAEK   K +  +I   EEAGIKSAT ++ G   YG L
Sbjct: 151 RSGAGGVDAADWAEMLMRMYIRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGDYMYGQL 210

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ + V PVV+    I+I +S+ R+D YR+SG GGQ
Sbjct: 211 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQVDSIDIPDSEVRVDVYRSSGPGGQ 270

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E + Q+     +   +
Sbjct: 271 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKRQEERAEMDALGA 330

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                 WG Q+RSYVL PYQMVKDLRTN E   PS VLDGD+D  ++A +  +
Sbjct: 331 G-GNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDIDGLLEAGIRWR 382


>gi|239930935|ref|ZP_04687888.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
          Length = 352

 Score =  257 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 155/349 (44%), Positives = 214/349 (61%), Gaps = 1/349 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  +  + D D     ++ L  +   P LW N  EA+ +     HL   +   + ++ R+
Sbjct: 1   MESIEAVLDLDRMRADIAVLEEQAAAPSLWDNPDEAQKITSRLSHLQAEVRKAEALRGRI 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D  +L E+A EEDD     E    L  ++  ++  +  +LLSGE D+ +A + + A AG
Sbjct: 61  DDLAVLFEMAEEEDDPDTRAEAEAELADVRKALDEMEVRTLLSGEYDAREALVNIRAEAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L  EQG
Sbjct: 121 GVDAADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLSVEQG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HRLVRISP+D+  RR TSF+ + V PVV+ S  ++I ESD R+D YR+SG GGQ VNTT
Sbjct: 181 THRLVRISPFDNQGRRQTSFAGVEVLPVVEQSDHVDIDESDLRVDVYRSSGPGGQGVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPTG+VV CQ ERSQ +N+A A N+L+AKL E   Q+ +   +  +      
Sbjct: 241 DSAVRITHIPTGIVVSCQNERSQIQNRATAMNVLQAKLLERRRQEEQAKMDALKGDGGN- 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 300 SWGNQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWRK 348


>gi|227832559|ref|YP_002834266.1| peptide chain release factor RF-2 [Corynebacterium aurimucosum ATCC
           700975]
 gi|262183572|ref|ZP_06042993.1| peptide chain release factor 2 [Corynebacterium aurimucosum ATCC
           700975]
 gi|254790912|sp|C3PES4|RF2_CORA7 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|227453575|gb|ACP32328.1| peptide chain release factor RF-2 [Corynebacterium aurimucosum ATCC
           700975]
          Length = 368

 Score =  257 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 155/353 (43%), Positives = 219/353 (62%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS  L  +  + D +   +R+  L  +  DP LW +   A+ +  E       +  +  
Sbjct: 11  ELSATLTSIEKVMDPEAVSERVRELEAQAGDPSLWDDPDHAQKVTSELSAQQAKLRKLNS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ R+ D  ++ ELA EE D +  +     L+ +   +E  +  ++LSGE D  +A + +
Sbjct: 71  LRGRIEDLPVMSELAEEEGDEASQELVETELKELGAAIESLEVTTMLSGEYDEREAVINI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMYTRWAEK   K +  +I   EEAGIKSAT ++ G   YG L
Sbjct: 131 RSGAGGVDAADWAEMLMRMYTRWAEKNGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  IE+ +S+ R+D YR+SG GGQ
Sbjct: 191 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDSIEVPDSEVRVDVYRSSGPGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E + Q+     +   +
Sbjct: 251 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAELDALGA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                 WG Q+RSYVL PYQMVKDLRTN E   PS VLDGD+D F+++ +  +
Sbjct: 311 G-GNASWGNQMRSYVLHPYQMVKDLRTNYEVGDPSKVLDGDIDGFLESGIRWR 362


>gi|148992417|ref|ZP_01822112.1| peptide chain release factor 2 [Streptococcus pneumoniae SP9-BS68]
 gi|147928734|gb|EDK79747.1| peptide chain release factor 2 [Streptococcus pneumoniae SP9-BS68]
 gi|332073119|gb|EGI83598.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17570]
          Length = 325

 Score =  257 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 148/325 (45%), Positives = 205/325 (63%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+ + +E   L N  +   ++++   +  ILL+   E++         
Sbjct: 1   MTEPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHDELVAQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
                    +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 61  LAELD--KIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+T+IPTG+VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|306835540|ref|ZP_07468554.1| peptide chain release factor RF2 [Corynebacterium accolens ATCC
           49726]
 gi|304568597|gb|EFM44148.1| peptide chain release factor RF2 [Corynebacterium accolens ATCC
           49726]
          Length = 370

 Score =  256 bits (654), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 216/353 (61%), Gaps = 4/353 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +    R+  L  +  DP LW +   A+ +  E       +  ++ 
Sbjct: 14  QLDTTLTTIEKVMDPEALAARIRELEAQAGDPSLWDDPEHAQKVTSELSSAQAKVRKLES 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  ++ ELA EE   S+  E    L   +  +E  +  ++LSGE D  +A + +
Sbjct: 74  LRGRLDDMPVMYELAEEEGTVSVADEDLAEL---ESAIESLEVTTMLSGEYDPREAVINI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMYTRWA K   K +  +I   EEAGIKSAT ++ G   YG L
Sbjct: 131 RSGAGGVDAADWAEMLMRMYTRWAGKHDHKVDIYDISYAEEAGIKSATFVVHGEYMYGQL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVR+SP+D+  RR TSF+ + V PVV+ +  I++ +++ R+D YR+SG GGQ
Sbjct: 191 SVEQGAHRLVRLSPFDNQGRRQTSFAEVEVLPVVEQTDHIDVPDNEVRVDVYRSSGPGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E + Q+     +   +
Sbjct: 251 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAELDALGA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                 WG Q+RSYVL PYQMVKDLRTN E   PS VLDGD+D F++A +  +
Sbjct: 311 G-GNASWGNQMRSYVLHPYQMVKDLRTNFEMGDPSKVLDGDIDGFLEAGIRWR 362


>gi|15674713|ref|NP_268887.1| peptide chain release factor 2 [Streptococcus pyogenes M1 GAS]
 gi|71910343|ref|YP_281893.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS5005]
 gi|13621834|gb|AAK33608.1| putative peptide chain release factor 2 [Streptococcus pyogenes M1
           GAS]
 gi|71853125|gb|AAZ51148.1| bacterial peptide chain release factor 2 [Streptococcus pyogenes
           MGAS5005]
          Length = 337

 Score =  256 bits (654), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 149/336 (44%), Positives = 213/336 (63%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L     +P  W + I A+   +E   L         +Q+   +  +LLE+  E
Sbjct: 1   MEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +D   + +E  +NL ++   +   +   LLS   D N+A LE+H G+GGTE+QDW ++LL
Sbjct: 61  DDS--LKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLL 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTR+     FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS
Sbjct: 119 RMYTRFGNANGFKIEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSF+S+ V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG
Sbjct: 179 AKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  
Sbjct: 239 IVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN E      V+DG+++ F+ A L  +
Sbjct: 299 PYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 334


>gi|322388283|ref|ZP_08061887.1| peptide chain release factor RF2 [Streptococcus infantis ATCC
           700779]
 gi|321140955|gb|EFX36456.1| peptide chain release factor RF2 [Streptococcus infantis ATCC
           700779]
          Length = 325

 Score =  256 bits (654), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 148/325 (45%), Positives = 203/325 (62%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L N  +   ++ +   +  ILL+   E++         
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMDELQDEVEILLDFLAEDESVKDELVEK 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +       +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 61  LSELD--QMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE++I E D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVDIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RTN
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTN 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|223932890|ref|ZP_03624886.1| peptide chain release factor 2 [Streptococcus suis 89/1591]
 gi|330832393|ref|YP_004401218.1| peptide chain release factor 2 [Streptococcus suis ST3]
 gi|223898471|gb|EEF64836.1| peptide chain release factor 2 [Streptococcus suis 89/1591]
 gi|329306616|gb|AEB81032.1| peptide chain release factor 2 [Streptococcus suis ST3]
          Length = 325

 Score =  256 bits (654), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 148/325 (45%), Positives = 202/325 (62%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + + A+   +E   L N      ++ D   ++ ILL+     +D S+  E  
Sbjct: 1   MTEPDFWNDNLAAQKTSQELNELKNTYGNFHQMLDLYDESEILLDF--LAEDESVRDELV 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW  MLLRMY R+   + 
Sbjct: 59  EKLVELDKTMTAYEMTLLLSDPYDHNNAILEIHPGSGGTEAQDWGEMLLRMYQRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L+   G+EAGIKS TL   GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FIVETLDYQAGDEAGIKSVTLSFTGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEIEI + + ++DT+R+ GAGGQ+VN   + VR+THIPTG+V Q   +R+Q
Sbjct: 179 EVMPELDDTIEIEIRDDEVKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  +L+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT 
Sbjct: 239 YGNRDRAMKLLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYTMVKDHRTG 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|313113161|ref|ZP_07798787.1| peptide chain release factor 2 [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310624500|gb|EFQ07829.1| peptide chain release factor 2 [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 373

 Score =  256 bits (654), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 151/349 (43%), Positives = 218/349 (62%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
           + +  L      D + +R+  L      P  + +   +K +  E   L   +S  +++Q 
Sbjct: 16  KAVKDLEEALAIDASRKRVQELEHTMSRPGFYDDADLSKKVFDEVGDLKGKLSRFEKLQG 75

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              D   +LE+  EE D +++ E  +++  +   V+  Q  ++L+GE D ++A L  HAG
Sbjct: 76  LYDDAETMLEMLDEEYDPAMIPEAEESVNAVGKAVDELQLMTMLNGEYDHSNAILTFHAG 135

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
            GGTE+QDWA ML RMY +WA       E L+  DG+EAG+KSA++++KG NAYG LK E
Sbjct: 136 TGGTEAQDWAEMLYRMYNKWASNHGMTVEVLDYQDGDEAGMKSASMMVKGANAYGLLKSE 195

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHRLVR+SP+D+N+RR TSF+S+ V P +D++I+++IS  D  +  YR+SGAGGQH+N
Sbjct: 196 NGVHRLVRVSPFDANARRQTSFASLEVMPELDNTIQVDISPEDIEMQVYRSSGAGGQHIN 255

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T SAVR+ H PTGVVV CQ +RSQ +N+  A  ML+AKLY++  Q+  +  +  +  + 
Sbjct: 256 KTSSAVRLIHKPTGVVVSCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKGVQN 315

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           EI WG QIRSYV  PY MVKD RTN E  +   V+DGDLD F+ A L  
Sbjct: 316 EIAWGHQIRSYVFMPYTMVKDHRTNYETGNVDAVMDGDLDGFIFAYLKA 364


>gi|307705242|ref|ZP_07642109.1| peptide chain release factor 2 [Streptococcus mitis SK597]
 gi|307621191|gb|EFO00261.1| peptide chain release factor 2 [Streptococcus mitis SK597]
          Length = 325

 Score =  256 bits (654), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 152/325 (46%), Positives = 211/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L N  +  +++++   +  ILL+     +D S+ +E  
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKNTYNTFQKMEELQDEVEILLDF--LAEDESVHEELV 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  EQLSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|118467007|ref|YP_883159.1| peptide chain release factor 2 [Mycobacterium avium 104]
 gi|166225107|sp|A0QJS1|RF2_MYCA1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|118168294|gb|ABK69191.1| peptide chain release factor 2 [Mycobacterium avium 104]
          Length = 370

 Score =  256 bits (654), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 163/356 (45%), Positives = 221/356 (62%), Gaps = 7/356 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R+  L  +  DP LW +   A+ +  E  H    +  I+E+
Sbjct: 12  LDSTLTTVERVLDVDGLRARIEKLEHEASDPQLWDDQARAQRVTSELSHAQGELRRIEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSGEADSNDAYLE 120
           + RL D  +L ELA EE + +       + +    + ++E  +  +LLSGE D  +A + 
Sbjct: 72  RARLDDLPVLYELAAEEGEGAAEALAEADAELKALRADIEATEVRTLLSGEYDEREALVT 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG 
Sbjct: 132 IRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGT 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG GG
Sbjct: 192 LSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL E   +KR E     +
Sbjct: 252 QSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKISAMRVLQAKLLE---RKRSEERAELD 308

Query: 301 SSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + K E G  WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +  +
Sbjct: 309 ALKGEGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWR 364


>gi|300783176|ref|YP_003763467.1| peptide chain release factor RF-2 [Amycolatopsis mediterranei U32]
 gi|299792690|gb|ADJ43065.1| peptide chain release factor RF-2 [Amycolatopsis mediterranei U32]
          Length = 357

 Score =  256 bits (654), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 147/352 (41%), Positives = 216/352 (61%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +L  +  + D D    +++ L  +   P+LW +   A+ +  +  H    +  + ++
Sbjct: 4   LTGKLTQIESVMDLDALRAQVADLEQQASSPNLWDDPEAAQKVTSQLSHRQGELRRVSDL 63

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L ELA  E D   + E    L  +   ++  +  +LLSGE D  +A + + 
Sbjct: 64  RQRLDDLGVLYELAEAEGDSGSMAEAEAELTDLGKAIDGLEVRTLLSGEYDDRNAVVTIR 123

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RWAE+  + T+  +I   EEAGIKSAT  +  P  YG L 
Sbjct: 124 SEAGGVDAADFAEMLLRMYLRWAERHGYPTDVYDISYAEEAGIKSATFKVSAPYVYGTLS 183

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+ SRR TSF+ + V P V++   ++++E D R+D YR+SG GGQ 
Sbjct: 184 VEQGTHRLVRISPFDNQSRRQTSFAHVEVLPEVEEVDHVDVAEKDIRVDVYRSSGPGGQS 243

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ E+SQ +NKA A  +L+A+L   + ++     +     
Sbjct: 244 VNTTDSAVRITHLPTGIVVSCQNEKSQLQNKAAAMKVLQARLMLRKKEEERAEMDALRDG 303

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +   WG Q+RSYVL PYQMVKDLRT+ E  +P+ VLDGD+D F+ A +  +
Sbjct: 304 GS--SWGNQMRSYVLHPYQMVKDLRTDYEVGNPTAVLDGDIDGFLDAGIRWR 353


>gi|192358804|ref|YP_001982940.1| peptide chain release factor 2 [Cellvibrio japonicus Ueda107]
 gi|190684969|gb|ACE82647.1| peptide chain release factor 2 [Cellvibrio japonicus Ueda107]
          Length = 329

 Score =  256 bits (654), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 168/327 (51%), Positives = 227/327 (69%), Gaps = 1/327 (0%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             +  +  +W N   A+ L RER  L+  +  I+ +   + D   LL++A+EE+D S++ 
Sbjct: 2   ELELAESSVWDNPERAQALGRERSSLEIVVKTIESLDSGVADCGELLDMAVEENDESMVA 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           +    + R++ E+   +F  + SGE D N+AYL++ +G+GGTE+QDWA M+LRMY RW E
Sbjct: 62  DVQAEIDRLEKELGVLEFRRMFSGETDPNNAYLDIQSGSGGTEAQDWAEMVLRMYLRWGE 121

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            + FK    E   GE AGIKSAT+  +G  A+GWL+ E GVHRLVR SP+DS +RRHTSF
Sbjct: 122 AKGFKVTLEECSAGEVAGIKSATIYFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSF 181

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
            S++V P +DD+IEIEI+ +D RIDTYRASGAGGQHVN TDSA+RITHIP+G+VVQCQ E
Sbjct: 182 CSVFVSPEIDDNIEIEINPADLRIDTYRASGAGGQHVNKTDSAIRITHIPSGIVVQCQNE 241

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQH N+ +A+ MLRA++YE E+ KR       E SK++IGWG QIRSYVL     VKDL
Sbjct: 242 RSQHANRDKAYKMLRARMYEQEMLKRNAEKQAMEDSKSDIGWGSQIRSYVLDD-SRVKDL 300

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAI 353
           RT ++ ++   VLDGDLD F+  +L  
Sbjct: 301 RTGVQTSNTQAVLDGDLDQFIVESLKA 327


>gi|213965439|ref|ZP_03393634.1| peptide chain release factor 2 [Corynebacterium amycolatum SK46]
 gi|213951823|gb|EEB63210.1| peptide chain release factor 2 [Corynebacterium amycolatum SK46]
          Length = 370

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 155/353 (43%), Positives = 213/353 (60%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D D    R+  L  +  DP LW +   A+ +          +  I  
Sbjct: 11  ELDATLTTIEKVVDVDELSDRIRELEAQAADPSLWDDPDHAQQVTSALSQAQAKMKKIDS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  ++ ELA EE D   ++        ++  +E  +  ++LSG  D  +A + +
Sbjct: 71  LRGRLDDLSVMYELAEEESDSDAVEMADAERAELRAAIESLEVTTMLSGPYDEREAVINI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMY RWA+K   K E  +    EEAGIKSAT ++ G   YG L
Sbjct: 131 RSGAGGVDAADWAEMLMRMYLRWADKHGHKVEVYDTSYAEEAGIKSATFVVHGEYMYGTL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ + V PVV+++  I+I ESD RID YR+SG GGQ
Sbjct: 191 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEETDHIDIPESDLRIDVYRSSGPGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+TH+PTG+VV CQ E+SQH+NKA A  +L+AKL E + Q+     +   +
Sbjct: 251 SVNTTDSAVRLTHVPTGIVVTCQNEKSQHQNKASAMRVLQAKLLEKKRQEERAELDALGA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                 WG Q+RSYVL PYQMVKDLRT  E  +P  VLDGDLD F++A +  +
Sbjct: 311 G-GNASWGNQMRSYVLHPYQMVKDLRTEYEVNNPQSVLDGDLDGFIEAGIRWR 362


>gi|111658353|ref|ZP_01409041.1| hypothetical protein SpneT_02000493 [Streptococcus pneumoniae
           TIGR4]
 gi|148997169|ref|ZP_01824823.1| peptide chain release factor 2 [Streptococcus pneumoniae SP11-BS70]
 gi|149010619|ref|ZP_01831990.1| peptide chain release factor 2 [Streptococcus pneumoniae SP19-BS75]
 gi|221231551|ref|YP_002510703.1| peptide chain release factor 2 [Streptococcus pneumoniae ATCC
           700669]
 gi|298502540|ref|YP_003724480.1| peptide chain release factor RF2 [Streptococcus pneumoniae
           TCH8431/19A]
 gi|147756869|gb|EDK63909.1| peptide chain release factor 2 [Streptococcus pneumoniae SP11-BS70]
 gi|147765100|gb|EDK72029.1| peptide chain release factor 2 [Streptococcus pneumoniae SP19-BS75]
 gi|220674011|emb|CAR68524.1| peptide chain release factor 2 [Streptococcus pneumoniae ATCC
           700669]
 gi|298238135|gb|ADI69266.1| peptide chain release factor RF2 [Streptococcus pneumoniae
           TCH8431/19A]
 gi|301793914|emb|CBW36310.1| peptide chain release factor 2 [Streptococcus pneumoniae INV104]
 gi|327390112|gb|EGE88455.1| peptide chain release factor 2 [Streptococcus pneumoniae GA04375]
 gi|332076034|gb|EGI86500.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41301]
 gi|332202619|gb|EGJ16688.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41317]
 gi|332204764|gb|EGJ18829.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47901]
          Length = 325

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 149/325 (45%), Positives = 203/325 (62%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L N  +   ++++   +  ILL+   E++         
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHDELVAQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
                    +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 61  LAELD--KIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E  K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQDKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|319946614|ref|ZP_08020848.1| peptide chain release factor RF2 [Streptococcus australis ATCC
           700641]
 gi|319746662|gb|EFV98921.1| peptide chain release factor RF2 [Streptococcus australis ATCC
           700641]
          Length = 325

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 149/325 (45%), Positives = 207/325 (63%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L        ++ D   ++ ILLE     +D S+ +E  
Sbjct: 1   MTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTDLFDESEILLEF--LSEDESVHEELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  +   +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+     
Sbjct: 59  EKLIELDKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAHG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGD+D F+ A L  +
Sbjct: 299 YEVAQVDKVMDGDIDGFIDAYLKWR 323


>gi|225868809|ref|YP_002744757.1| peptide chain release factor 2 [Streptococcus equi subsp.
           zooepidemicus]
 gi|225702085|emb|CAW99717.1| peptide chain release factor 2 [Streptococcus equi subsp.
           zooepidemicus]
          Length = 338

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 153/336 (45%), Positives = 214/336 (63%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L  K  +P  W + + A+   +E   L         +Q+   +    L L + 
Sbjct: 1   MEEDIALLENKMTEPDFWNDNMAAQKTSQELNELKLTYQTFHNMQELSDETE--LYLEML 58

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           ++D S+ +E   +L R+   +   +   LLS   D ++A LE+H G+GGTE+QDWA+ML 
Sbjct: 59  DEDDSVKEELEASLTRLSQMLASYEMTLLLSEPYDHSNAILEIHPGSGGTEAQDWADMLF 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTR+   + FK E L+   G+EAGIKS TL I+GPNAYG+LK E GVHRLVRISP+DS
Sbjct: 119 RMYTRFGNAKGFKVETLDYQAGDEAGIKSVTLSIEGPNAYGFLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSF S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG
Sbjct: 179 AKRRHTSFVSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY+LE +K+ E  N  +  K EI WG QIRSYV  
Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN E      V+DGD++ F+ A L  +
Sbjct: 299 PYTMVKDHRTNFEVAQVDKVMDGDIEGFIDAYLKWR 334


>gi|307706955|ref|ZP_07643754.1| peptide chain release factor 2 [Streptococcus mitis SK321]
 gi|307617669|gb|EFN96837.1| peptide chain release factor 2 [Streptococcus mitis SK321]
          Length = 325

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 152/325 (46%), Positives = 210/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L N  +   ++++   +  ILL+     +D S+ +E  
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDF--LAEDESVHEELV 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  EQLSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|311739769|ref|ZP_07713603.1| peptide chain release factor RF2 [Corynebacterium pseudogenitalium
           ATCC 33035]
 gi|311304842|gb|EFQ80911.1| peptide chain release factor RF2 [Corynebacterium pseudogenitalium
           ATCC 33035]
          Length = 367

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 152/353 (43%), Positives = 216/353 (61%), Gaps = 4/353 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +    R+  L  +  DP LW +   A+ +  E       +  ++ 
Sbjct: 11  QLETTLTTIEKVMDPEALAARIRELEAQAGDPSLWDDPAHAQQVTSELSAAQAKVRKLES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  ++ EL    ++        D L  ++  +E  +  ++LSGE D  +A + +
Sbjct: 71  LRVRLEDMPVMYEL---AEEEGDTSLADDELDSLESAIESLEVTTMLSGEYDPREAVINI 127

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMYTRWAEK   K +  +I   EEAGIKSAT ++ G   YG L
Sbjct: 128 RSGAGGVDAADWAEMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I ++D R+D YR+SG GGQ
Sbjct: 188 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDHIDIPDNDVRVDVYRSSGPGGQ 247

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E + Q+ +   +   +
Sbjct: 248 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEEQAELDALGA 307

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                 WG Q+RSYVL PYQMVKDLRTN E   PS VLDGD+D F+++ +  +
Sbjct: 308 G-GNASWGNQMRSYVLHPYQMVKDLRTNFEVGDPSKVLDGDIDGFLESGIRWR 359


>gi|146319066|ref|YP_001198778.1| peptide chain release factor 2 [Streptococcus suis 05ZYH33]
 gi|146321272|ref|YP_001200983.1| peptide chain release factor 2 [Streptococcus suis 98HAH33]
 gi|145689872|gb|ABP90378.1| Protein chain release factor B [Streptococcus suis 05ZYH33]
 gi|145692078|gb|ABP92583.1| Protein chain release factor B [Streptococcus suis 98HAH33]
 gi|292558711|gb|ADE31712.1| Peptide chain release factor 2 [Streptococcus suis GZ1]
 gi|319758505|gb|ADV70447.1| peptide chain release factor 2 [Streptococcus suis JS14]
          Length = 325

 Score =  256 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 148/325 (45%), Positives = 202/325 (62%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + + A+   +E   L N      ++ D   ++ ILL+     +D S+  E  
Sbjct: 1   MTEPDFWNDNLAAQKTSQELNELKNTYGNFHQMLDLYDESEILLDF--LAEDESVRDELV 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW  MLLRMY R+   + 
Sbjct: 59  EKLVELDKTMTAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGEMLLRMYQRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L+   G+EAGIKS TL   GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FIVETLDYQAGDEAGIKSVTLSFTGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEIEI + + ++DT+R+ GAGGQ+VN   + VR+THIPTG+V Q   +R+Q
Sbjct: 179 EVMPELDDTIEIEIRDDEVKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  +L+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT 
Sbjct: 239 YGNRDRAMKLLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYTMVKDHRTG 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|297181318|gb|ADI17509.1| protein chain release factor b [uncultured bacterium HF0130_06E03]
          Length = 325

 Score =  256 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 154/325 (47%), Positives = 212/325 (65%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +   A+ + ++ +    +I   + +  +  D   L E+A  + D S L +  
Sbjct: 1   MSDPSFWSDRKNAEKISKQARLFKESIEAWETLTSQHKDLCELQEMAAADGDESALSDLE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  +   VE  +F S+L G  DS +A L +H+GAGGTE+ DWA MLLRMY RW E+  
Sbjct: 61  NEVDELTKNVESFEFRSMLDGVDDSKNAILVIHSGAGGTEAADWAEMLLRMYNRWTERNG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
            K++ ++I  GEEAGIK  T+ + G  AYG+LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 LKSKVMDIQPGEEAGIKGVTIEVSGEYAYGYLKAEAGVHRLVRISPFDSGGRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           +VYP VDD IE+++ + D +I+ YRA GAGGQHVN T SAVRITH+PTG+VVQCQ ERSQ
Sbjct: 181 FVYPDVDDDIEVDLKDEDLKIEVYRAGGAGGQHVNKTSSAVRITHVPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KNKA A  +L A++Y+    +  +     E+SK  I +G QIRSYV  PY +VKD RTN
Sbjct: 241 FKNKATALKVLTARVYQNIKDEENKKLKEVENSKKSIDFGSQIRSYVFHPYNLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGD+D F++A L ++
Sbjct: 301 YETGNVQAVMDGDIDKFIRAFLTLE 325


>gi|323126937|gb|ADX24234.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 327

 Score =  256 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 148/325 (45%), Positives = 202/325 (62%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+ + ++   L +       +Q+   +  + LE+  E+D      E S
Sbjct: 1   MTEPDFWNDNIAAQKISQKLNELKSTYETFHNMQELSDETELYLEMLEEDDSVKDDLEAS 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
                  L          LS   D N+A LE+H G+GGTE+QDWA+ML RMYTR+   + 
Sbjct: 61  LETLGQILASYEMTLL--LSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS  RRHTSF S+
Sbjct: 119 FKVETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFVSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+    N  +  K EI WG QIRSYV  PY MVKD RTN
Sbjct: 239 YGNRDRAIKMLQAKLYQLEQEKKAAEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGD++ F+ A L  +
Sbjct: 299 YEVAQVDKVMDGDIEGFIDAYLKWR 323


>gi|117928939|ref|YP_873490.1| peptide chain release factor 2 [Acidothermus cellulolyticus 11B]
 gi|166223620|sp|A0LVP4|RF2_ACIC1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|117649402|gb|ABK53504.1| bacterial peptide chain release factor 2 (bRF-2) [Acidothermus
           cellulolyticus 11B]
          Length = 369

 Score =  256 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 148/347 (42%), Positives = 214/347 (61%), Gaps = 1/347 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L  +  + D     +  + L  +  DP LW +   A+ +      L   I  ++ +
Sbjct: 13  LDTRLAGIEQVLDLPAMRREAADLERQAADPGLWNDPENAQRVTSRLSFLQAEIRRVEGL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D ++L ELA  E+D     E    +  ++  ++  +  +LLSGE D+ +A + ++
Sbjct: 73  RKRLDDVMVLFELAEAENDEPTRTEALAEMAALQKAIDDLEVRTLLSGEYDAREALVTIN 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ DWA MLLRMY RWAE+  + TE L+    EEAGIKSAT ++  P  YG L 
Sbjct: 133 SQAGGVDAADWAQMLLRMYLRWAERHGYPTEILDTSYAEEAGIKSATFIVHAPFTYGLLA 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+ +RR TSF+ + V PVV+ +  I+I E + R+D +R+SG GGQ 
Sbjct: 193 AEHGTHRLVRISPFDNQARRQTSFAGVDVVPVVEKTDHIDIPEDEIRVDVFRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ ERSQ +N+A A  +L+A+L E   Q+           
Sbjct: 253 VNTTDSAVRITHLPTGIVVTCQNERSQLQNRATAMMVLQARLLERRRQEEAAKLAALRGE 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
            T   WG QIR+YVL PYQ+VKDLRT +E ++ + VLDG++D+F+ A
Sbjct: 313 -TTTSWGTQIRNYVLHPYQLVKDLRTEVETSNTAGVLDGEIDEFIDA 358


>gi|295100603|emb|CBK98148.1| bacterial peptide chain release factor 2 (bRF-2) [Faecalibacterium
           prausnitzii L2-6]
          Length = 373

 Score =  256 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 147/352 (41%), Positives = 215/352 (61%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +    +  L      D + +R+  L      P  + +   +K +  E   L   ++  ++
Sbjct: 13  EYHTAVKDLEEALAIDASRKRVQELEHTMSRPGFYDDAELSKKVFDEVGDLKGKLNRFEK 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +Q    D   +L +  EE D  ++ E  + +  +   V+  Q  ++L+GE D ++A L  
Sbjct: 73  LQGLYDDAETMLVMLDEEYDPEMVPEAEEAVNAVGKAVDELQLMTMLNGEYDHSNAILTF 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAG GGTE+QDWA ML RMY +WA+      E L+  DG+EAG+KSA++++KG NAYG L
Sbjct: 133 HAGTGGTEAQDWAEMLYRMYNKWAQAHGMTVEVLDYQDGDEAGMKSASMMVKGANAYGLL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SP+D+N+RR TSF+S+ V P +D++I+++I   D  +  YR+SGAGGQ
Sbjct: 193 KSENGVHRLVRVSPFDANARRQTSFASLEVMPELDNTIQVDIRPEDIEMQVYRSSGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N T SAVR+ H PTG+VV CQ +RSQ +N+  A  ML+AKLY++  Q+  +  +  + 
Sbjct: 253 HINKTSSAVRLIHKPTGIVVSCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            + EI WG QIRSYV  PY MVKD RTN E  +   V+DGDLD F+ A L  
Sbjct: 313 VQNEIAWGHQIRSYVFMPYTMVKDHRTNYETGNVDAVMDGDLDGFIFAYLKA 364


>gi|302524557|ref|ZP_07276899.1| peptide chain release factor 2 [Streptomyces sp. AA4]
 gi|302433452|gb|EFL05268.1| peptide chain release factor 2 [Streptomyces sp. AA4]
          Length = 376

 Score =  256 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 152/353 (43%), Positives = 222/353 (62%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +L  +  + D +    +++ L  +   P LW NV EA+ +  +  H    +  + E+
Sbjct: 21  LTGKLTQIESVMDLEALRAQVAELEEQASSPTLWDNVEEAQKVTSQLSHRQAELRRVSEL 80

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L ELA +E D   + E   +L  +  +++  +  +LLSGE D  +A + + 
Sbjct: 81  RQRLDDLGVLYELAADEGDSGSMTEAEGDLADLAKDIDALEVRTLLSGEYDDRNAVVNIR 140

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RWAE+  + T+  +I   EEAGIKSAT  +  P  YG L 
Sbjct: 141 SEAGGVDAADFAEMLLRMYLRWAERHGYPTDVFDISYAEEAGIKSATFKVTAPYVYGTLS 200

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+ SRR TSF+ + V P V++   ++I E D R+D YR+SG GGQ 
Sbjct: 201 VEQGTHRLVRISPFDNQSRRQTSFAHVEVLPEVEEVDHVDIPEKDIRVDVYRSSGPGGQS 260

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+A+L + + ++     +  +  
Sbjct: 261 VNTTDSAVRLTHIPTGIVVSCQNEKSQLQNKAAAMKVLQARLLQRKKEEERAEMDALKDG 320

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +   WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +  +K
Sbjct: 321 GS--SWGNQMRSYVLHPYQMVKDLRTEFEVGNPTAVLDGDIDGFLEAGIRWRK 371


>gi|188590075|ref|YP_001919915.1| peptide chain release factor 2 [Clostridium botulinum E3 str.
           Alaska E43]
 gi|188500356|gb|ACD53492.1| peptide chain release factor 2 [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 344

 Score =  256 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 160/343 (46%), Positives = 230/343 (67%), Gaps = 1/343 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           LFD +   ++LS L  + ++   W +   A+ + +E + + + I  ++ +Q +L D  +L
Sbjct: 3   LFDKEYLEKQLSELEFQMQEDGFWNDTKRAEEITKESKRIKDKIQRVESVQSKLDDIEVL 62

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            E+  ++D+ S  +   +N++ I+ E++    E LLSGE D N+A L +H G GGT++ D
Sbjct: 63  KEMMDDDDEESAYE-IINNIKEIEEEIDNYNMEILLSGEYDKNNAILTLHVGVGGTDAND 121

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           W  MLLRMYTRW EK+ +K E +++ +G+EAGIKS TL + G  AYG+LK E+G+HRLVR
Sbjct: 122 WTEMLLRMYTRWCEKKNYKVEVIDLLEGDEAGIKSVTLKVIGEYAYGYLKAEKGIHRLVR 181

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+++N +R TSF+S+ V P +    +I+I   D ++DTYRASGAGGQH+N TDSAVRI
Sbjct: 182 ISPFNANGKRQTSFASMEVLPELTKEQDIDIRSEDIKVDTYRASGAGGQHINKTDSAVRI 241

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           THIPTGVVVQCQ ERSQ  NK  A  ML+AKL EL+ +  +E          ++GWG QI
Sbjct: 242 THIPTGVVVQCQNERSQFSNKDTAMGMLKAKLIELKERAHKEKIEDLTGELKDMGWGSQI 301

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           RSYV  PY +VKD RTN+E ++ + V+DGDLD F+ + L   K
Sbjct: 302 RSYVFHPYNLVKDHRTNVEVSNVTAVMDGDLDLFINSYLKSSK 344


>gi|195977853|ref|YP_002123097.1| peptide chain release factor 2 [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225870173|ref|YP_002746120.1| peptide chain release factor 2 [Streptococcus equi subsp. equi
           4047]
 gi|195974558|gb|ACG62084.1| peptide chain release factor 2 PrfB [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225699577|emb|CAW93198.1| peptide chain release factor 2 [Streptococcus equi subsp. equi
           4047]
          Length = 338

 Score =  256 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 152/336 (45%), Positives = 215/336 (63%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L  K  +P  W + + A+   +E   L        ++Q+   +    L L + 
Sbjct: 1   MEEDIALLENKMTEPDFWNDNMAAQKTSQELNELKLTYQTFHDMQELSDETE--LYLEML 58

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           ++D S+ +E   +L ++   +   +   LLS   D ++A LE+H G+GGTE+QDWA+ML 
Sbjct: 59  DEDDSVKEELEASLIKLSQMLASYEMTLLLSEPYDHSNAILEIHPGSGGTEAQDWADMLF 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTR+   + FK E L+   G+EAGIKS TL I+GPNAYG+LK E GVHRLVRISP+DS
Sbjct: 119 RMYTRFGNAKGFKVETLDYQAGDEAGIKSVTLSIEGPNAYGFLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSF S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG
Sbjct: 179 AKRRHTSFVSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY+LE +K+ E  N  +  K EI WG QIRSYV  
Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RTN E      V+DGD++ F+ A L  +
Sbjct: 299 PYTMVKDHRTNFEVAQVDKVMDGDIEGFIDAYLKWR 334


>gi|148244437|ref|YP_001219131.1| peptide chain release factor RF-2 [Candidatus Vesicomyosocius
           okutanii HA]
 gi|146326264|dbj|BAF61407.1| peptide chain release factor RF-2 [Candidatus Vesicomyosocius
           okutanii HA]
          Length = 364

 Score =  256 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 170/352 (48%), Positives = 233/352 (66%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L +    L    +      RL  +  + EDP++W+N  +A+ L RE+  L +     +++
Sbjct: 13  LKKCSGTLSIHLNLKKKQYRLEEILLEMEDPNIWENPNQAQSLGREKSKLISICQTFEQV 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D   LL LA  E+D        ++L   +  +E  +F+ + SG+ D+N AYL++ 
Sbjct: 73  NAILEDAQELLNLAQTENDTETANGIINDLDTAQSSIEKLEFKRMFSGDLDANSAYLDIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +G+GGTE+QDWA M+LRMY RW EK  FK + +E+  GE AGIKSAT+  KG  A+GWL+
Sbjct: 133 SGSGGTEAQDWAEMVLRMYLRWGEKHNFKIKLMEVSAGEVAGIKSATIHFKGEYAFGWLR 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+++N +RHTSF S++V P +D  I+I+IS SD RIDTYRASGAGGQH
Sbjct: 193 TEIGIHRLVRKSPFNANGKRHTSFCSVFVSPEIDSDIDIDISPSDLRIDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+PT  VVQCQ  RSQH NK QA   L++KLY+LE+QKR       E S
Sbjct: 253 VNKTESAVRITHLPTNTVVQCQNGRSQHANKNQAIKQLQSKLYKLEMQKRNTEKQSLEQS 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K++I WG QIRSY+L     VKDLRT IE ++  ++L+G+LD FMKA+L  +
Sbjct: 313 KSDISWGHQIRSYILD-QSRVKDLRTGIESSNTQNILEGNLDQFMKASLKSR 363


>gi|54294665|ref|YP_127080.1| hypothetical protein lpl1742 [Legionella pneumophila str. Lens]
 gi|53754497|emb|CAH15981.1| hypothetical protein lpl1742 [Legionella pneumophila str. Lens]
          Length = 335

 Score =  256 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 175/330 (53%), Positives = 230/330 (69%), Gaps = 1/330 (0%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             +  + E  ++W N  +A+ L RER  L+  +  + ++   + D   L ELA EEDD  
Sbjct: 2   EEVIRELESSNVWDNPEQAQALGRERTQLETIVHSLSQLSQSISDQSELFELAREEDDEQ 61

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
            + +  + L+ I+ +V   +F  + SG+ D ++AYL++ AG+GGTE+QDWA MLLRMY R
Sbjct: 62  TINDIGEELKSIEQQVASLEFRRMFSGKMDHSNAYLDIQAGSGGTEAQDWAEMLLRMYLR 121

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           W E   F TE +E   GE AGIKSAT+   G  A+GWL+ E GVHRLVR SP+DS +RRH
Sbjct: 122 WGEHHGFTTELIECSPGEVAGIKSATIHFTGEYAFGWLRTETGVHRLVRKSPFDSGNRRH 181

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSF++++V P +DD IEIEI+ +D RIDTYRASGAGGQHVN TDSAVRITHIP+G+VVQC
Sbjct: 182 TSFAAVFVSPEIDDDIEIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHIPSGIVVQC 241

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           Q +RSQHKNK QA   LRAKLYELE+QK+       E+SK++IGWG QIRSYVL     +
Sbjct: 242 QNDRSQHKNKDQAMKQLRAKLYELEMQKKNAEQQALEASKSDIGWGSQIRSYVLD-QSRI 300

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KDLRT +E ++   VLDG LD F++A+L  
Sbjct: 301 KDLRTGVETSNTQAVLDGSLDQFIEASLKA 330


>gi|258591448|emb|CBE67749.1| Peptide chain release factor 2 (RF-2) [NC10 bacterium 'Dutch
           sediment']
          Length = 334

 Score =  256 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 162/324 (50%), Positives = 223/324 (68%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
                  W +   A+ +M+E++ L + +  +  I   L D  +LL L  EE+D   L+E 
Sbjct: 1   MLHSQEFWADTSRAREIMKEQRALKDVVDQLVAIGGELDDLAVLLGLLREEEDPQALKEL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
             +L+ ++ ++   +  + ++ E DS +A L ++ GAGGTESQDWA MLLRMY RWAE  
Sbjct: 61  ESSLRSLEGQIGALELTTFMAEEYDSGNAILSINPGAGGTESQDWAQMLLRMYLRWAETG 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +KTE +++   EEAGIKSAT+ + G  AYG LK E GVHRLVRISP+D+N RRHTSF+S
Sbjct: 121 SYKTEIIDLLPAEEAGIKSATVTVSGKYAYGRLKAEIGVHRLVRISPFDANHRRHTSFAS 180

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           ++VYP +D++I++ I + D RIDTYR+SGAGGQHVN TDSAVRITH+PT +VV CQ ERS
Sbjct: 181 VFVYPEIDETIDVAIDDKDLRIDTYRSSGAGGQHVNVTDSAVRITHLPTNIVVSCQNERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QHKNKA A  +LRA+LY+   +++E+     E  K +I WG QIRSYVL PYQ+VKD RT
Sbjct: 241 QHKNKAMAMKVLRARLYDHYRREQEKEMAKLEGEKKDIAWGSQIRSYVLAPYQLVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
            +E ++   VLDG+++ F+ A L 
Sbjct: 301 GLETSNVDKVLDGEIEPFIDAFLM 324


>gi|118444993|ref|YP_878978.1| peptide chain release factor 2 [Clostridium novyi NT]
 gi|118135449|gb|ABK62493.1| peptide chain release factor 2 [Clostridium novyi NT]
          Length = 337

 Score =  256 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 165/335 (49%), Positives = 230/335 (68%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             +RL  L  K ++   W ++ +A+ + +E + + + I      + R+ D  +L+E+++E
Sbjct: 1   MEKRLGELEHKMQESDFWDDINKAQEITQEAKGIKDRIDGYNSTKTRIEDLEVLIEMSIE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E+D S ++E  + ++ I+  ++  + E LLSGE D N+A + +H+GAGGT++QDW  MLL
Sbjct: 61  EEDESSIEEILNEVEEIESIIDNFKVEILLSGEYDKNNAIVTLHSGAGGTDAQDWTEMLL 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTRWAEKR +K + L+I  G+EAGIKSA L I G  AYG+LK E+G+HRLVRISP+++
Sbjct: 121 RMYTRWAEKRGYKVDVLDILPGDEAGIKSANLKITGEFAYGYLKAEKGIHRLVRISPFNA 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           N +R TSF+S+ V P + ++ +IEI   D RIDTYRASGAGGQH+N TDSAVRITHIPTG
Sbjct: 181 NGKRQTSFASLEVIPELKENQDIEIKADDLRIDTYRASGAGGQHINKTDSAVRITHIPTG 240

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VVQ Q ERSQ +NK  A +ML++KL EL+ +  +E          EIGWG QIRSYV Q
Sbjct: 241 IVVQSQSERSQFQNKDTAMSMLKSKLVELKERAHKEKIEDLSGDLKEIGWGSQIRSYVFQ 300

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           PY MVKD RTN E  +   V+DGD+D F+   L  
Sbjct: 301 PYTMVKDHRTNTEMGNVDAVMDGDIDIFILEYLKA 335


>gi|328955235|ref|YP_004372568.1| bacterial peptide chain release factor 2 (bRF-2) [Coriobacterium
           glomerans PW2]
 gi|328455559|gb|AEB06753.1| bacterial peptide chain release factor 2 (bRF-2) [Coriobacterium
           glomerans PW2]
          Length = 383

 Score =  256 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 143/355 (40%), Positives = 206/355 (58%), Gaps = 5/355 (1%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           + +L  +      D   +R+  L  ++  P  W +   A+ +M E     + +S ++  +
Sbjct: 17  AARLCEVESYLHLDEKRERIVELEQRSARPDFWDDGERARAVMEELSCARDDVSGVERAR 76

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYL 119
            RL D +  L+LA E +      E +        E    ++  +  S  +GE D   A +
Sbjct: 77  TRLADAVAALQLASELEHGDEADELAAEATAAASELTREIDQMELSSWFTGEFDHGSAII 136

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            +  G GG E+QDW  ML +MY ++ E+R +K    +    +  GI  AT  ++G +A+G
Sbjct: 137 TIKPGQGGLEAQDWTFMLFKMYMKYCERRGWKVTVNDCPPADVIGIDRATFTVEGKDAFG 196

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L+ E GVHRLVRISP D   RR T+F+ + V PV+ D I++EI  +D R+D Y ASG G
Sbjct: 197 MLRAEAGVHRLVRISPTDDKKRRQTTFAGVEVIPVLPDDIDVEIDPTDIRVDVYHASGPG 256

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA    +L+++L+ELEL+KREE  +  
Sbjct: 257 GQGVNTTDSAVRVTHLPTGIVVTCQNERSQIQNKAACMQILKSRLFELELEKREEALDEI 316

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAI 353
              K  IG+G QIRSYVL PYQMVKDLR+ +E  + + VL DGDLD F+      
Sbjct: 317 RGPKHTIGFGNQIRSYVLYPYQMVKDLRSGVETGNVASVLEDGDLDPFIIGYHRW 371


>gi|331695045|ref|YP_004331284.1| peptide chain release factor 2 [Pseudonocardia dioxanivorans
           CB1190]
 gi|326949734|gb|AEA23431.1| Peptide chain release factor 2 [Pseudonocardia dioxanivorans
           CB1190]
          Length = 369

 Score =  256 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 151/353 (42%), Positives = 220/353 (62%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+  L  +  + D       ++ L  +   P LW +   A+ +     H +  +  ++++
Sbjct: 12  LAGTLENIEAVVDLPALRVEIADLEEQAGQPDLWNDTETAQKVTSRLAHANGELRRVEDL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L ELA +E D S + +   +   ++ E+E  +  +LLSGE D  +A + + 
Sbjct: 72  RRRLDDLPVLYELAEDEGDESAIADADRDRVALRAEIESLEVRTLLSGEYDEREALVTIR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A ML+RMY RWAE+  +  +  +    EEAGIKSAT  +  P AYG L 
Sbjct: 132 SEAGGVDAADFAEMLMRMYLRWAERHGYGVDVYDTSYAEEAGIKSATFQVHAPYAYGTLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I E D R+D YR+SG GGQ 
Sbjct: 192 VEQGTHRLVRISPFDNQGRRQTSFAGVEVAPVVESTDHIDIDEKDLRVDVYRSSGPGGQG 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A  +L+AKL E + Q+   + +  + +
Sbjct: 252 VNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMVVLQAKLLERKRQEERALMDSLKDT 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +   WG Q+RSYVL PYQMVKDLRT+ E  +P  VLDGD+D F++A +  ++
Sbjct: 312 GS--SWGNQMRSYVLHPYQMVKDLRTDFEVGNPGAVLDGDIDGFIEAGIRWRR 362


>gi|282891215|ref|ZP_06299718.1| hypothetical protein pah_c048o046 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498908|gb|EFB41224.1| hypothetical protein pah_c048o046 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 341

 Score =  256 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 157/335 (46%), Positives = 220/335 (65%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           +   ++  L T+ E P  W +   A+ ++ E   L        ++++R  +   LL+ A 
Sbjct: 3   SKEAKVKALETEMEAPTFWDDNDAAQKVIAECNALKAWTIPYHDLKERYSNVSELLQEAF 62

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           +  + S++QE  + L  I+  ++  +   +L+GE DS +A+L ++AGAGGTE+ DW  ML
Sbjct: 63  DLGEESLIQELVEELDSIEASLKELEIRKMLAGELDSKNAFLSINAGAGGTEACDWVLML 122

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY RWA K+ +K E ++  DG+ AGIKS T    GP AYG+ K E+GVHRLVRISP+D
Sbjct: 123 SRMYQRWAAKKNWKVEVIDTVDGDVAGIKSITYKFTGPFAYGYAKAEKGVHRLVRISPFD 182

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           SN++RHTSF+S+ + P + D I+IEI   D R+DT+RASGAGGQHVN TDSAVR+TH+PT
Sbjct: 183 SNAKRHTSFASVDITPEITDDIQIEIRPEDLRVDTFRASGAGGQHVNRTDSAVRLTHLPT 242

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VV CQ +RSQ +NK   + MLR+KLYE+E+  RE         K EI WG QIR+YV 
Sbjct: 243 GIVVSCQAQRSQLQNKETCYKMLRSKLYEMEVTARENALKAMGGEKKEIAWGSQIRNYVF 302

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QPY +VKD RT +E  +   V+DG+LDDF+ A L 
Sbjct: 303 QPYTLVKDTRTKVECGNIQAVMDGELDDFVNAYLM 337


>gi|325679774|ref|ZP_08159348.1| peptide chain release factor 2 [Ruminococcus albus 8]
 gi|324108589|gb|EGC02831.1| peptide chain release factor 2 [Ruminococcus albus 8]
          Length = 378

 Score =  256 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 150/350 (42%), Positives = 230/350 (65%), Gaps = 3/350 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  L  ++D +NA +++  L+ K  +P  W +  ++++++++ ++L+  +    +     
Sbjct: 20  IKELHDVYDIENAAEKIEELHEKAAEPGFWDDPEKSQVVLQQTRNLEGKVERYNKFNGAA 79

Query: 67  CDNLILLELALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            D  +++E+A EED+ +  +   +    L ++K +++    E+LL+GE D ++A L  HA
Sbjct: 80  DDIEVMIEMAGEEDEDTQAELVEEIKAELDKLKADLDAASLETLLTGEYDHSNAILNFHA 139

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDW  ML+RMYT+WA+   F  + ++I +G +AGIKS ++ I+G NAYG+LK 
Sbjct: 140 GAGGTEAQDWTEMLIRMYTKWADSHGFNAKIMDILEGGDAGIKSCSMFIEGENAYGYLKS 199

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G+HRLVRISP+DS+  RHTSFS++ V P +DD+IE+EI   D  ++ YRASGAGGQH+
Sbjct: 200 ESGIHRLVRISPFDSSGSRHTSFSAVEVMPELDDNIEVEIRPEDIEMEVYRASGAGGQHI 259

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVR+ H PTG+V  CQ +RSQ +N+  A  ML+AKL E++ ++  E     +  +
Sbjct: 260 NKTSSAVRLIHKPTGIVTACQTQRSQFQNRDYAMKMLKAKLIEIKEREHLEKIEDIKGVQ 319

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            EI WG QIRSYV  PY +VKDLRT  E  +   V+DGDLD F+ A L  
Sbjct: 320 KEIAWGSQIRSYVFMPYTLVKDLRTGYEYNNVKAVMDGDLDGFINAYLKA 369


>gi|303327864|ref|ZP_07358304.1| peptide chain release factor 2 [Desulfovibrio sp. 3_1_syn3]
 gi|302862225|gb|EFL85159.1| peptide chain release factor 2 [Desulfovibrio sp. 3_1_syn3]
          Length = 366

 Score =  255 bits (652), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 160/348 (45%), Positives = 220/348 (63%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L   GG+FD  ++ QRL  + T+   P  W        +++E++ L++ +  +  ++   
Sbjct: 14  LTTFGGVFDVASSEQRLRDIETELSRPGAWDKPEALTPVLQEKRRLEDEVGRLTRLKTCR 73

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D    L LA E +D   L+      + +   ++  +   LLS E D  DA LE+H GAG
Sbjct: 74  DDMEEWLVLASENEDQEALESLEQQQKELAALLDETELVMLLSAEEDGQDAILEIHPGAG 133

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTESQDWA MLLR+YTRWA +RK+  E ++   G+EAGIKS TL I GP+A+G+LK E+G
Sbjct: 134 GTESQDWAEMLLRLYTRWAARRKYAVEEMDFLPGDEAGIKSVTLRISGPHAFGFLKSERG 193

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRL+RISP+D++ RRHTSF+S+ V P   + I+++I ESD R D +R+SG GGQ VNTT
Sbjct: 194 IHRLIRISPFDASGRRHTSFASVDVIPDAGNDIQLDIKESDLRFDIFRSSGPGGQSVNTT 253

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+TH+PTG+  QCQ E+SQH NK  A  +LRA+LY LELQKRE       + K  I
Sbjct: 254 SSAVRVTHLPTGISAQCQNEKSQHHNKETALRVLRARLYNLELQKREAERQAEYAGKDAI 313

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +G QIR+Y LQPY++VKD RT  E      VLDG +D F    L  +
Sbjct: 314 AFGSQIRTYTLQPYRLVKDHRTGSESGDVDAVLDGQIDQFQHDYLLYR 361


>gi|306833909|ref|ZP_07467033.1| peptide chain release factor RF2 [Streptococcus bovis ATCC 700338]
 gi|304423910|gb|EFM27052.1| peptide chain release factor RF2 [Streptococcus bovis ATCC 700338]
          Length = 325

 Score =  255 bits (652), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 150/325 (46%), Positives = 203/325 (62%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L        E+Q+   +  + LE+  E+D      E S
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNGLKQTYETFNEMQELSDETELYLEMLDEDDSVQAELEES 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
                    +   +   LLS   D N+A LE+H G+GGTE+QDWA+ML RMYTR+   + 
Sbjct: 61  LEKLD--KIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADMLFRMYTRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSFSS+
Sbjct: 119 FKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFSSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  PY MVKD RT 
Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTG 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGD+D F+ A L  +
Sbjct: 299 YEIAQVDKVMDGDIDGFIDAYLKWR 323


>gi|15594420|ref|NP_212208.1| peptide chain release factor 2 [Borrelia burgdorferi B31]
 gi|2687953|gb|AAC66459.1| peptide chain release factor 2 (prfB) [Borrelia burgdorferi B31]
          Length = 348

 Score =  255 bits (652), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 150/347 (43%), Positives = 216/347 (62%), Gaps = 4/347 (1%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG FD +    ++     +    + W +   A+ +++ +  L N I   +E+ +++ 
Sbjct: 3   KTFGGSFDKNEIQAKIEKYEKEINQKNFWNDPKRAQKVIKAQSILKNKIDPWEELINKIK 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   L       ++             ++ + +     S    E D+N+A+L +H+GAGG
Sbjct: 63  DLSDL---CEIAENEKDTNGLEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGG 119

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+
Sbjct: 120 TEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGI 178

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRL+RISP+D+  +RHTSF+S++V PV+DD IEI I   D RIDTYRASGAGGQHVN T 
Sbjct: 179 HRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEITIKPEDIRIDTYRASGAGGQHVNKTS 238

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     + +K EI 
Sbjct: 239 SAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEIS 298

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L  K
Sbjct: 299 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 345


>gi|256832101|ref|YP_003160828.1| peptide chain release factor 2 [Jonesia denitrificans DSM 20603]
 gi|256685632|gb|ACV08525.1| peptide chain release factor 2 [Jonesia denitrificans DSM 20603]
          Length = 369

 Score =  255 bits (652), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 147/354 (41%), Positives = 224/354 (63%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +    +++ L+ +   P LW +  +A+ +        N +  I+ 
Sbjct: 11  QLRATLATISAVSDPEALTAKIAELSDQASAPDLWDDPAQAQQVTSALSLAQNELKRIES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +Q R+ D  +L+E+A+E +D   L E  D    IK +++  +  +LLSGE D+ +A + +
Sbjct: 71  MQQRIDDLEVLVEMAVEGNDADTLHEAEDEYAAIKKDLDQLEVRTLLSGEYDAREAVVTI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG ++ D+A MLLRMY RWAE+  + T  L+    EEAG+KSAT  +K P A+G L
Sbjct: 131 RAGAGGVDAADFAEMLLRMYLRWAERHGYPTAVLDTSYAEEAGLKSATFEVKAPYAFGTL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+++ +  +EI +++ R+D +R+SG GGQ
Sbjct: 191 SVEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIEQTDHVEIPDNEIRVDVFRSSGPGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  LE Q  E+      +
Sbjct: 251 SVNTTDSAVRLTHIPTGIVVSMQNEKSQIQNRAAAMRVLQSRL-LLERQAEEKAKKKELA 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +  WG Q+RSYVLQPYQMVKDLRT  E  + + V DG +DDF++A +  ++
Sbjct: 310 GDIKASWGDQMRSYVLQPYQMVKDLRTEHEVGNTNAVFDGHIDDFIEAGIRWRR 363


>gi|119947032|ref|YP_944712.1| peptide chain release factor 2 [Psychromonas ingrahamii 37]
 gi|119865636|gb|ABM05113.1| bacterial peptide chain release factor 2 (bRF-2) [Psychromonas
           ingrahamii 37]
          Length = 329

 Score =  255 bits (652), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 166/325 (51%), Positives = 222/325 (68%), Gaps = 1/325 (0%)

Query: 28  TKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQE 87
            + E P +W     A+ L +ER  L+  +  I  +     D L+L+E+A EE+D     E
Sbjct: 3   RELESPEVWSEPERAQALGKERSALELVVDTIDALSAGTEDILMLVEMATEENDQDSFDE 62

Query: 88  TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
               +  ++ ++E  +F  + SG  D+   YL++ +G+GGTE+QDWAN+LLRMY RW E 
Sbjct: 63  AQKEVNELEKKLEVLEFRRMFSGNHDACSCYLDIQSGSGGTEAQDWANILLRMYLRWGEA 122

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
             +KTE +E+  G+ AGIK AT+   G  A+GWL+ E GVHRLVR SP+DS+ RRHTSF+
Sbjct: 123 HGYKTELMEVSAGDVAGIKGATIRFTGEYAFGWLRTETGVHRLVRKSPFDSSGRRHTSFA 182

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           S ++YP ++D I+I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT +VVQCQ +R
Sbjct: 183 SAFIYPEIEDDIDIQINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNIVVQCQNDR 242

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQHKNK QA   L+AKLYE ELQK+     I E SK++IGWG QIRSYVL     +KDLR
Sbjct: 243 SQHKNKDQAMKQLKAKLYEHELQKQNAEKQISEDSKSDIGWGSQIRSYVLDD-ARIKDLR 301

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLA 352
           T IE  +   VLDG LD F++A+L 
Sbjct: 302 TGIESRNTQAVLDGGLDKFIEASLK 326


>gi|326692249|ref|ZP_08229254.1| peptide chain release factor 2 [Leuconostoc argentinum KCTC 3773]
          Length = 333

 Score =  255 bits (652), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 148/326 (45%), Positives = 211/326 (64%), Gaps = 1/326 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL-ALEEDDCSILQET 88
             +   W + ++A+ ++ E   L N       + ++  +  +L+E+ + + +D     E 
Sbjct: 1   MTESGFWDDNVKAQKVIEENNILKNRRDSFLNLTNQAEEIAVLIEMLSEDPEDEDTAAEL 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           + ++++++ +VE    E LL+   D+N+A LEVH G+GGTES DW   L RMYTRWA++ 
Sbjct: 61  AASVEKVQKDVEAYNLEQLLTEPYDANNAILEVHPGSGGTESTDWGANLYRMYTRWAQQH 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            F+ E L+ H G+EAGI SAT+ I G NAYG+L+ E+GVHR VRISP+DS  RRHTSF S
Sbjct: 121 GFQVEVLDYHAGDEAGIDSATIKISGHNAYGFLRSEKGVHRFVRISPFDSAGRRHTSFVS 180

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P +DD+IE+E+ + D ++D +R+ GAGGQ+VN   + VR+TH PTG+VV    ER+
Sbjct: 181 VDVMPELDDTIEVEVRDDDIKMDVFRSGGAGGQNVNKVSTGVRLTHEPTGIVVSSTVERT 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q+ N+  A  +L+ KLY+LEL+K+          K E GWG QIRSYVL PYQMVKD RT
Sbjct: 241 QYGNRDYAMRLLKGKLYQLELEKQAAERAALTGEKMENGWGSQIRSYVLHPYQMVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
           N E   P  VLDGDLD F+ A L  +
Sbjct: 301 NYETNQPQQVLDGDLDPFINAYLQWQ 326


>gi|325066934|ref|ZP_08125607.1| peptide chain release factor 2 [Actinomyces oris K20]
          Length = 373

 Score =  255 bits (652), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 145/357 (40%), Positives = 211/357 (59%), Gaps = 4/357 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L      +  + D +    R++ L+ +   P LW +   A+++     H    +  ++ 
Sbjct: 11  RLRHTYASIAAVTDPEALRARIAELSEQASAPDLWDDPDSAQVVTSALSHAQADLKRVES 70

Query: 62  IQDRLCDNL---ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           + +R+ D      L      ED   IL E   +L  I  ++   +  +LLSGE D  DA 
Sbjct: 71  LGERIEDLEAMVELAGEEEGEDAAEILAEAETDLAAISKDLSDLEIRTLLSGEYDPRDAV 130

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ D+A MLLRMYTRWAE+  +  + L     EEAG+KS T  +  P AY
Sbjct: 131 ITIRSGAGGVDAADFAEMLLRMYTRWAERHDYPVKVLNTSYAEEAGLKSVTFEVHAPYAY 190

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  I+I E+D RID +R+SG 
Sbjct: 191 GTLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHIDIPETDIRIDVFRSSGP 250

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +N+A A  +L+++L  L+ Q+ +     
Sbjct: 251 GGQSVNTTDSAVRITHLPTGLVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQQEEDAKKKE 310

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                 +  WG Q+RSYVL PYQMVKDLRTN E  +P  V DGD+D F+ A +  +K
Sbjct: 311 LAGD-VKASWGDQMRSYVLNPYQMVKDLRTNFEVGNPDSVFDGDIDGFIDAGIRWRK 366


>gi|325287611|ref|YP_004263401.1| hypothetical protein Celly_2713 [Cellulophaga lytica DSM 7489]
 gi|324323065|gb|ADY30530.1| hypothetical protein Celly_2713 [Cellulophaga lytica DSM 7489]
          Length = 365

 Score =  255 bits (652), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 157/351 (44%), Positives = 224/351 (63%), Gaps = 2/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L  L    D D  +  +     KT  P  W N   A+  M+  Q     +    + 
Sbjct: 10  LLDRLGALRRYLDIDAKLIEIENEEEKTLAPDFWNNAQVAQAQMKVLQSKKKWVKDFDDA 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  + D  +LLE   E D  +      ++  + K  +E  +F+++LS E D   A L++ 
Sbjct: 70  KILIADLEVLLEFLKEGDVTAEE--VENHYNKAKTHIEDLEFKNMLSDEGDELTAILQIT 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA ML+RMY  WAEK  +K + L   +G+ AGIK+ TL I+G  A+GWLK
Sbjct: 128 AGAGGTESCDWAAMLMRMYLMWAEKNGYKIKELNYQEGDVAGIKTVTLEIEGDYAFGWLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+DSN++RHTSF+S++VYP+ DDSIEIEI+ +D  I T R+SGAGGQ+
Sbjct: 188 GENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDSIEIEINPADIEITTARSSGAGGQN 247

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++ V++TH PTG+ + C   RSQH N+A A  ML+++LYE+EL+K++E  +  E+ 
Sbjct: 248 VNKVETKVQLTHKPTGIQISCSDSRSQHDNRATAMKMLKSQLYEIELRKKQEARSEIEAG 307

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K +I WG QIR+YV+ PY++VKD+RT  E  +   V+DG +D F+KA L +
Sbjct: 308 KMKIEWGSQIRNYVMHPYKLVKDVRTAEETGNVDAVMDGQIDPFLKAYLMM 358


>gi|306829186|ref|ZP_07462376.1| peptide chain release factor RF2 [Streptococcus mitis ATCC 6249]
 gi|304428272|gb|EFM31362.1| peptide chain release factor RF2 [Streptococcus mitis ATCC 6249]
          Length = 325

 Score =  255 bits (652), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 152/325 (46%), Positives = 208/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L N  +   ++++   +  ILL+     +D S+  E  
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKNTYNTFCKMEELQDEVEILLDF--LAEDESVHDELV 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  +   +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  EQLTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|227502940|ref|ZP_03932989.1| peptide chain release factor 2 [Corynebacterium accolens ATCC
           49725]
 gi|227076362|gb|EEI14325.1| peptide chain release factor 2 [Corynebacterium accolens ATCC
           49725]
          Length = 367

 Score =  255 bits (652), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 216/353 (61%), Gaps = 4/353 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +    R+  L  +  DP LW +   A+ +  E       +  ++ 
Sbjct: 11  QLDTTLTTIEKVMDPEALAARIRELEAQAGDPSLWDDPEHAQKVTSELSSAQAKVRKLES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D  ++ ELA EE   S+  E    L   +  +E  +  ++LSGE D  +A + +
Sbjct: 71  LRGRLDDMPVMYELAEEEGTVSVADEDLAEL---ESAIESLEVTTMLSGEYDPREAVINI 127

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMYTRWA K   K +  +I   EEAGIKSAT ++ G   YG L
Sbjct: 128 RSGAGGVDAADWAEMLMRMYTRWAGKHDHKVDIYDISYAEEAGIKSATFVVHGEYMYGQL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVR+SP+D+  RR TSF+ + V PVV+ +  I++ +++ R+D YR+SG GGQ
Sbjct: 188 SVEQGAHRLVRLSPFDNQGRRQTSFAEVEVLPVVEQTDHIDVPDNEVRVDVYRSSGPGGQ 247

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E + Q+     +   +
Sbjct: 248 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAELDALGA 307

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                 WG Q+RSYVL PYQMVKDLRTN E   PS VLDGD+D F++A +  +
Sbjct: 308 G-GNASWGNQMRSYVLHPYQMVKDLRTNFEMGDPSKVLDGDIDGFLEAGIRWR 359


>gi|166154673|ref|YP_001654791.1| peptide chain release factor 2 [Chlamydia trachomatis 434/Bu]
 gi|238687385|sp|B0B832|RF2_CHLT2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|165930661|emb|CAP04158.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
           434/Bu]
          Length = 368

 Score =  255 bits (652), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 160/350 (45%), Positives = 211/350 (60%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L       D +     L  L  +      W +V  A  +      L   +S   E+
Sbjct: 12  LLEGLALTRRSLDPEGKENELKELEQQAVQDGFWDDVARAGKISERIARLKQQLSEFNEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++++      LE      D  + +E        + ++   +   LLSGE D N  +L ++
Sbjct: 72  KNKVSTIQFFLEDEESSKDLEMQKELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DW  M+LRMY RWA    ++ E ++  DGE AGIK  TL + G  AYG+ K
Sbjct: 132 AGAGGTESCDWVEMVLRMYMRWASSHSWRVEVIDRLDGEVAGIKHITLKLVGEYAYGYAK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DSN++RHTSF+S+ V+P +DD IE+EI   D RIDTYR+SGAGGQH
Sbjct: 192 AESGVHRLVRISPFDSNAKRHTSFASVEVFPEIDDKIEVEIHPGDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVRITH PTG+VV CQ ERSQ +N+    NMLRA++Y+  LQ+R E  NI   +
Sbjct: 252 VNVTDSAVRITHFPTGIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKN 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
           K EI WG QIR+YV QPY +VKD+RT  E  +   ++DG+ LD F+KA L
Sbjct: 312 KKEISWGSQIRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYL 361


>gi|52842005|ref|YP_095804.1| peptide chain release factor 2 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|148359322|ref|YP_001250529.1| peptide chain release factor 2 [Legionella pneumophila str. Corby]
 gi|296107369|ref|YP_003619069.1| Protein chain release factor B [Legionella pneumophila 2300/99
           Alcoy]
 gi|52629116|gb|AAU27857.1| peptide chain release factor 2 (RF-2) [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|148281095|gb|ABQ55183.1| peptide chain release factor 2 (RF-2) [Legionella pneumophila str.
           Corby]
 gi|295649270|gb|ADG25117.1| Protein chain release factor B [Legionella pneumophila 2300/99
           Alcoy]
 gi|307610478|emb|CBX00050.1| hypothetical protein LPW_18051 [Legionella pneumophila 130b]
          Length = 335

 Score =  255 bits (652), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 175/330 (53%), Positives = 230/330 (69%), Gaps = 1/330 (0%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             +  + E  ++W N  +A+ L RER  L+  +  + ++   + D   L ELA EEDD  
Sbjct: 2   EEVIRELESSNVWDNPEQAQALGRERTQLETIVHSLSQLSQSISDQRELFELAREEDDEQ 61

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
            + +  + L+ I+ +V   +F  + SG+ D ++AYL++ AG+GGTE+QDWA MLLRMY R
Sbjct: 62  TINDIGEELKSIEQQVASLEFRRMFSGKMDHSNAYLDIQAGSGGTEAQDWAEMLLRMYLR 121

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           W E   F TE +E   GE AGIKSAT+   G  A+GWL+ E GVHRLVR SP+DS +RRH
Sbjct: 122 WGEHHGFTTELIECSPGEVAGIKSATIHFTGEYAFGWLRTETGVHRLVRKSPFDSGNRRH 181

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSF++++V P +DD IEIEI+ +D RIDTYRASGAGGQHVN TDSAVRITHIP+G+VVQC
Sbjct: 182 TSFAAVFVSPEIDDDIEIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHIPSGIVVQC 241

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           Q +RSQHKNK QA   LRAKLYELE+QK+       E+SK++IGWG QIRSYVL     +
Sbjct: 242 QNDRSQHKNKDQAMKQLRAKLYELEMQKKNAEQQALEASKSDIGWGSQIRSYVLD-QSRI 300

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KDLRT +E ++   VLDG LD F++A+L  
Sbjct: 301 KDLRTGVETSNTQAVLDGSLDQFIEASLKA 330


>gi|326771885|ref|ZP_08231170.1| peptide chain release factor 2 [Actinomyces viscosus C505]
 gi|326638018|gb|EGE38919.1| peptide chain release factor 2 [Actinomyces viscosus C505]
          Length = 373

 Score =  255 bits (652), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 145/357 (40%), Positives = 211/357 (59%), Gaps = 4/357 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L      +  + D +    R++ L+ +   P LW +   A+++     H    +  ++ 
Sbjct: 11  RLRHTYASIAAVTDPEALRARIAELSEQASAPDLWDDPDSAQVVTSALSHAQADLKRVES 70

Query: 62  IQDRLCDNL---ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           + +R+ D      L      ED   IL E   +L  I  ++   +  +LLSGE D  DA 
Sbjct: 71  LGERIEDLEAMVELAGEEEGEDAAEILAEAEMDLAAISKDLSDLEIRTLLSGEYDPRDAV 130

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ D+A MLLRMYTRWAE+  +  + L     EEAG+KS T  +  P AY
Sbjct: 131 ITIRSGAGGVDAADFAEMLLRMYTRWAERHDYPVKVLNTSYAEEAGLKSVTFEVHAPYAY 190

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  I+I E+D RID +R+SG 
Sbjct: 191 GTLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHIDIPETDIRIDVFRSSGP 250

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +N+A A  +L+++L  L+ Q+ +     
Sbjct: 251 GGQSVNTTDSAVRITHLPTGLVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQQEEDAKKKE 310

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                 +  WG Q+RSYVL PYQMVKDLRTN E  +P  V DGD+D F+ A +  +K
Sbjct: 311 LAGD-VKASWGDQMRSYVLNPYQMVKDLRTNFEVGNPDSVFDGDIDGFIDAGIRWRK 366


>gi|94969367|ref|YP_591415.1| peptide chain release factor 2 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551417|gb|ABF41341.1| bacterial peptide chain release factor 2 (bRF-2) [Candidatus
           Koribacter versatilis Ellin345]
          Length = 343

 Score =  255 bits (652), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 166/332 (50%), Positives = 227/332 (68%), Gaps = 2/332 (0%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
           + +  +  DP+LW N   ++ +MRER+ L++A++  K++  R  D     +LA E +D +
Sbjct: 2   AEVEKEAADPNLWGNPENSQRVMRERKRLEDALATDKDLSRRTDDITAYFDLAKEGEDIT 61

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
                   + +++  VE  + E+LLSG++D   A + +H GAGGTESQDWA MLLRMY R
Sbjct: 62  ADLRR--EMDQLRDIVEKLETETLLSGDSDRLSAIVTIHPGAGGTESQDWAEMLLRMYLR 119

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           WAE++ F+T   +   GEEAG+KS T+ + G +AYG L  E GVHRLVRISP+D   RRH
Sbjct: 120 WAERQGFETTVNDYQPGEEAGLKSVTITVAGQDAYGLLTSEIGVHRLVRISPFDQAKRRH 179

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSF+S++V P +D+SIE+ +   D R DTYR+ G GGQHVNTTDSAVRITH PTG+VV C
Sbjct: 180 TSFASVFVSPEIDESIEVIVKPDDIRTDTYRSGGKGGQHVNTTDSAVRITHFPTGIVVSC 239

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           Q ERSQHKN+ +A  +LR+K+YE EL+K+   +   E SK +I +G QIRSYVL PY+MV
Sbjct: 240 QNERSQHKNRERAMKILRSKIYEYELEKKRAASQKVEDSKLDIDFGSQIRSYVLHPYRMV 299

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           KD RT  E   P  VLDGDL  F++A L +++
Sbjct: 300 KDHRTKFEVGDPDRVLDGDLKGFIRAYLLMRR 331


>gi|254820379|ref|ZP_05225380.1| peptide chain release factor 2 [Mycobacterium intracellulare ATCC
           13950]
          Length = 370

 Score =  255 bits (651), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 163/356 (45%), Positives = 221/356 (62%), Gaps = 7/356 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R+  L  +  DP LW +   A+ +  E  H    +  I+E+
Sbjct: 12  LDSTLTTVERVLDVDGLRARIEKLEREASDPQLWDDQTRAQRVTSELSHAQGELRRIEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSGEADSNDAYLE 120
           + RL D  +L ELA EE + +       + +    + E+E  +  +LLSGE D  +A + 
Sbjct: 72  RGRLDDLPVLYELAAEEGEGAAEALAEADAELKALQAEIEATEVRTLLSGEYDEREALVT 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG 
Sbjct: 132 IRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVELFDTSYAEEAGIKSATFAVHAPFAYGT 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG GG
Sbjct: 192 LSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+TH+PTG+VV CQ E+SQ +NK  A  +L+AKL E   +KR E     +
Sbjct: 252 QSVNTTDSAVRLTHVPTGIVVTCQNEKSQLQNKISAMRVLQAKLLE---RKRSEERAELD 308

Query: 301 SSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + K E G  WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +  +
Sbjct: 309 ALKGEGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWR 364


>gi|167626878|ref|YP_001677378.1| peptide chain release factor 2 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167596879|gb|ABZ86877.1| peptide chain release factor 2 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 346

 Score =  255 bits (651), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 176/346 (50%), Positives = 241/346 (69%), Gaps = 3/346 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +N  G +FD+D   +RL+ +  + ED  +W N   A+ L R++  L+N +   + I + L
Sbjct: 1   MNLYGTIFDYDVKKERLTEVLMELEDGSIWDNPEYAQNLGRQKVELENVVHNCEYISETL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
               +   L L E+D S++QE + + Q +  E+E  +F  + SG+ D N+A+L++ +G+G
Sbjct: 61  E--TLTELLELAEEDESLMQEIAKDTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSG 118

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWA ML+RMY RWA+   FK    ++ DG+ AGIK  TL ++G  AYGWL+ E G
Sbjct: 119 GTEAQDWAEMLMRMYMRWADSHGFKVTVDDVSDGDVAGIKGCTLKVEGEYAYGWLRTETG 178

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVR SP+DSNS+RHTSF+S+++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN T
Sbjct: 179 IHRLVRKSPFDSNSKRHTSFASVFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKT 238

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPT +VVQ Q +RSQHKN+  A   L++KLYE+ELQKR    N  E SK +I
Sbjct: 239 DSAVRITHIPTNIVVQSQSDRSQHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADI 298

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           GWG QIRSYVL     +KDLRT +E T+   VLDGDLD F++A+L 
Sbjct: 299 GWGSQIRSYVLD-QSRIKDLRTGVENTNTQAVLDGDLDKFIEASLK 343


>gi|240168635|ref|ZP_04747294.1| peptide chain release factor 2 [Mycobacterium kansasii ATCC 12478]
          Length = 376

 Score =  255 bits (651), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 160/357 (44%), Positives = 220/357 (61%), Gaps = 8/357 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    ++  L  +  DP LW +   A+ +  E  H    +  ++++
Sbjct: 16  LDSTLTTVERVLDVDALRAKIDKLEHEASDPKLWDDQARAQRVTSELSHAQGELRRVEQL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYL 119
           + RL D  +L ELA EE+  +  +  ++    +K      +     +LLSGE D  +A +
Sbjct: 76  RSRLDDLPVLYELAAEEEGEAAAEALAEADAELKALHAEIEATEVRTLLSGEYDEREALV 135

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG
Sbjct: 136 TIRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYG 195

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG G
Sbjct: 196 TLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 255

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL E   +KR E     
Sbjct: 256 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKLLE---RKRLEERAEL 312

Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           ++ K E G  WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +  +
Sbjct: 313 DALKGEGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWR 369


>gi|300781771|ref|ZP_07091625.1| peptide chain release factor RF2 [Corynebacterium genitalium ATCC
           33030]
 gi|300533478|gb|EFK54539.1| peptide chain release factor RF2 [Corynebacterium genitalium ATCC
           33030]
          Length = 364

 Score =  255 bits (651), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 156/352 (44%), Positives = 217/352 (61%), Gaps = 4/352 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L + L  +  + D D    R   L  +  DP LW +   A+ +  E   +   +  ++ +
Sbjct: 12  LEQTLTTIEKVMDLDEMDARARELEQQAADPSLWDDPEHAQSVTTELSSVQARVRRVRSL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  ++ ELA EE D ++     D L  +   VE  +  ++LSGE D  +A + + 
Sbjct: 72  RQRIDDLPVMYELAAEEGDYTL---AEDELADLTTAVETLEVTTMLSGEYDQREAVVNIR 128

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ DWA ML+RMY RWAEK   K +  +I   EEAGIKSAT ++ G   YG L 
Sbjct: 129 SGAGGVDAADWAEMLMRMYIRWAEKNGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQLS 188

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I +S+ RID YR+SG GGQ 
Sbjct: 189 VEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEKTDHIDIPDSEIRIDVYRSSGPGGQS 248

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH PTG+VV CQ E+SQ +NKA A N+L++KL E + Q+ +   +   + 
Sbjct: 249 VNTTDSAVRITHEPTGIVVTCQNEKSQIQNKASAMNVLQSKLLERKRQEEKAELDALGAG 308

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                WG Q+RSYVL PYQMVKDLRTN E   P  VLDGD+D F+++ +  +
Sbjct: 309 -GNASWGNQMRSYVLHPYQMVKDLRTNYEVGDPQKVLDGDIDGFLESGIRWR 359


>gi|297171258|gb|ADI22265.1| protein chain release factor B [uncultured Gemmatimonadales
           bacterium HF0200_36I24]
 gi|297171357|gb|ADI22361.1| protein chain release factor B [uncultured nuHF2 cluster bacterium
           HF0500_02A10]
          Length = 334

 Score =  255 bits (651), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 163/324 (50%), Positives = 222/324 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
                 W N  +A  ++ E   L N +    ++  ++ +   + +L   EDD  +  E  
Sbjct: 1   MATAGFWDNQDKASEVIAESNRLKNWVKPWHDLNTKVSELTEIRDLLEHEDDEDLTHELI 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             + +I+  +E  +  ++L G  D   A L VH GAGG ESQDWA ML RMY+RWAE   
Sbjct: 61  SEVDKIEGPIEDLELRTMLQGPDDHRGAILTVHPGAGGLESQDWAEMLTRMYSRWAENHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +    L++  G+EAGIKSATL + G +AYG+LK E+G+HRLVRISP+D+ SRRHTSF+S+
Sbjct: 121 YDLNVLDMQPGDEAGIKSATLEVVGGHAYGYLKAEKGIHRLVRISPFDAQSRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           ++YP+VDD IEIEI+ESD R+DT+RASGAGGQHVN TDSA+RITHIPTG+ V CQQERSQ
Sbjct: 181 FIYPLVDDEIEIEIAESDLRVDTFRASGAGGQHVNKTDSAIRITHIPTGIAVSCQQERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H N+A A  ML+A LYE  L+++E+     E++KT+IGWG QIRSYV QPY MV D RT+
Sbjct: 241 HMNRATAMKMLQASLYERALEEKEQEKEAIEATKTDIGWGNQIRSYVFQPYTMVNDHRTD 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
           ++ +  + V+DG+LD F++A L  
Sbjct: 301 LKISDVNKVMDGNLDPFIEAYLKQ 324


>gi|145593537|ref|YP_001157834.1| peptide chain release factor 2 [Salinispora tropica CNB-440]
 gi|189040004|sp|A4X3K6|RF2_SALTO RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|145302874|gb|ABP53456.1| bacterial peptide chain release factor 2 (bRF-2) [Salinispora
           tropica CNB-440]
          Length = 373

 Score =  255 bits (651), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 161/355 (45%), Positives = 220/355 (61%), Gaps = 5/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D      + L      P LW +   A+ +  +  +++  I+ + E+
Sbjct: 13  LDATLRNIESVLDIDRLRADKARLEEAASAPDLWDDQARAQQVTSQLSYVNGEINKLAEL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +LLELA  E D   L E    +  +   ++  +  +LLSGE DS +A + + 
Sbjct: 73  RSRLDDAKVLLELAEAESDPGALTEVEAEVAGLAKAIDEMEVRTLLSGEYDSREALVAIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A MLLRMY RWAE+  + TE  E    EEAG+KSAT  +K P AYG L 
Sbjct: 133 AGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFTVKVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I E++ R D YR+SG GGQ 
Sbjct: 193 VESGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIDIPENEMRFDVYRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV CQ E+SQ +NKA A  +L+A+L E   +KR+E     +  
Sbjct: 253 VNTTDSAVRITHIPTGIVVTCQNEKSQLQNKASALRVLQARLLE---RKRQEEQAKLQGL 309

Query: 303 KTEI--GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           KT+    WG Q+RSYVL PYQMVKDLRT  E  +P+ V DG+LD F++A +  +K
Sbjct: 310 KTDAAGSWGDQMRSYVLHPYQMVKDLRTEQETGTPAAVFDGELDAFIEAGIRWRK 364


>gi|78356848|ref|YP_388297.1| peptide chain release factor 2 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219253|gb|ABB38602.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 358

 Score =  255 bits (651), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 170/351 (48%), Positives = 227/351 (64%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           M  S  L   GG FD   +  RL  +  +   P  W    +   ++RE+  L+N+++ + 
Sbjct: 1   MPFSSSLKRSGGAFDHAQSKYRLEEIEKQLSSPDAWNAPEKLTPVLREKSQLENSVARLD 60

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            ++    D    LELA EE+   +L++  +    ++  +E  +   LLS E D + A LE
Sbjct: 61  ALRQAKDDMQGWLELAEEENTQEVLEQLEEQAGILEALLEETEVGLLLSAEEDKHAAILE 120

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +H GAGGTE+QDWA MLLRMY RWAE  +FK E L+  DG+EAGIKS TL I G NAYG 
Sbjct: 121 IHPGAGGTEAQDWAEMLLRMYVRWAESHEFKAEYLDYLDGDEAGIKSVTLKIDGTNAYGL 180

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LKGE+G+HRL+RISPYD++ RRHTSF+S+ V P   + I I+I +SD RID +R+SG GG
Sbjct: 181 LKGEKGIHRLIRISPYDASGRRHTSFASVDVIPDAGEEITIDIKDSDLRIDIFRSSGPGG 240

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTT SAVR+THIPTG+  QCQ E+SQH NK  A  +LRA+LYE E+++R+       
Sbjct: 241 QSVNTTSSAVRVTHIPTGITAQCQNEKSQHHNKETAMQILRARLYEAEIRRRDAEKQADY 300

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +SK  IGWG QIR+Y LQPY++VKD R+N E      VLDG+LD  M+  L
Sbjct: 301 ASKEAIGWGSQIRTYTLQPYRLVKDHRSNFEVGDVEAVLDGELDALMRNHL 351


>gi|220905200|ref|YP_002480512.1| hypothetical protein Ddes_1938 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869499|gb|ACL49834.1| hypothetical protein Ddes_1938 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 370

 Score =  255 bits (651), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 159/352 (45%), Positives = 223/352 (63%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+++   L G  D   + +RL  + T+   P  W        L++E++ L++ ++ + ++
Sbjct: 14  LAQRFASLWGRLDVAASEKRLQAIETEISRPGAWDKPEALTPLLQEKRRLEDEVARLNKL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D    L LA E +D   L+  +   + +   ++  +   LLS E DS DA LE+H
Sbjct: 74  KTCHDDMNEWLALAAESEDPEALESLAQQQKDLAALLDETELVMLLSAEEDSQDAILEIH 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA MLLRMYTRWA    +K E L+   G+EAG+KS TL + GP+A+G+LK
Sbjct: 134 PGAGGTESQDWAEMLLRMYTRWAADHDYKVEELDFLPGDEAGVKSVTLRVGGPHAFGFLK 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+G+HRL+RISP+DS+ RRHTSF+S+ V P   D IE+++ E+D R+D +R+SG GGQ 
Sbjct: 194 SERGIHRLIRISPFDSSGRRHTSFASVDVIPDAGDDIELDLKEADLRVDIFRSSGPGGQS 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT SAVRITHIP+G+  QCQ E+SQH NK  A  +LRA+LY +EL+KRE       + 
Sbjct: 254 VNTTSSAVRITHIPSGISAQCQNEKSQHHNKETALRVLRARLYNMELEKREAARQAQYAG 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K  I +G QIR+Y LQPY++VKD RT  E      VLDG +D F    L  +
Sbjct: 314 KDAIAFGSQIRTYTLQPYRLVKDHRTGTEVGDVDAVLDGQIDAFQHDYLLHR 365


>gi|323697942|ref|ZP_08109854.1| peptide chain release factor 2 [Desulfovibrio sp. ND132]
 gi|323457874|gb|EGB13739.1| peptide chain release factor 2 [Desulfovibrio desulfuricans ND132]
          Length = 372

 Score =  255 bits (651), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 163/344 (47%), Positives = 218/344 (63%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
             L G  D+     RL  +  +   P  W N      L++E+  L   +     + +   
Sbjct: 19  ESLWGRLDYAETKTRLDAIEKEISKPGAWDNPEALTPLLKEKSQLSTKLEMYDGLSEAKD 78

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D    LELA E+ D   L   +  +  ++  +   +  ++ + E D  DA LE+H GAGG
Sbjct: 79  DLDAWLELAQEDPDEESLSALNAQVALLRERLAGTELATMFAFEHDKGDAILEIHPGAGG 138

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            ESQDWA MLLRMY R+AE++ FK   L+   GEEAG+KS TL I+G  AYG LKGE GV
Sbjct: 139 VESQDWAEMLLRMYYRYAERKGFKVTQLDYQAGEEAGLKSVTLQIEGLFAYGLLKGETGV 198

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRL+RISP+DS+ RRHTSF+S+ VYP +D++IEIE+ + D RIDT+R+SG GGQ VN T 
Sbjct: 199 HRLIRISPFDSSGRRHTSFASVDVYPDMDENIEIEVKDEDLRIDTFRSSGPGGQSVNKTS 258

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG+V QCQ E+SQH+NKA A  +++A+LYE EL+K EE       +K  I 
Sbjct: 259 SAVRITHIPTGIVAQCQNEKSQHRNKATALRLVKARLYERELKKIEESRRQDYQAKDAIA 318

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           WG QIR+Y LQPY++VKD R+N E  +    LDGDLD+ ++  L
Sbjct: 319 WGSQIRTYTLQPYRLVKDHRSNCESGNVDAFLDGDLDEMIRNYL 362


>gi|124515298|gb|EAY56808.1| Peptide chain release factor 2 [Leptospirillum rubarum]
          Length = 370

 Score =  255 bits (651), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 169/346 (48%), Positives = 234/346 (67%), Gaps = 5/346 (1%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD D     L  ++ +++ P  W++   A+ ++RE+  L+  +S I+ I+    D  
Sbjct: 11  GGIFDADRLKVTLEQIDAQSQSPEFWKDSDRARKMLREKSRLEKRLSLIQGIEKEDADIR 70

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L ELA + D  + L             V+  + E +LS     N A+LE+H GAGGTES
Sbjct: 71  ALFELASDPDFLAELSRRVPEFS---ESVKAFELEEILSDAKSDNPAFLEIHPGAGGTES 127

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMY RWAE+     E ++I  GEEAGIKSAT+L++G +A+G+L  E G+HRL
Sbjct: 128 QDWAQMLLRMYIRWAERHGMTVEVIDIQSGEEAGIKSATILVRGEHAFGYLMSESGIHRL 187

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+D+N RRHTSF+S++VYP ++D I +EI + D RIDT+RAS AGGQHVN T SA+
Sbjct: 188 VRISPFDANKRRHTSFTSVFVYPELEDDIPVEIRDEDIRIDTFRASSAGGQHVNKTSSAI 247

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES--SKTEIGW 308
           R+TH+PTG+V+  Q ERSQ +N+  A+ +LRAKLYELE ++++E  +      +K EIGW
Sbjct: 248 RLTHLPTGIVISSQNERSQLQNREMAFKVLRAKLYELEEKRKKEELDKISGAQNKKEIGW 307

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           G QIRSYVLQPYQ++KD RT +E    S+VLDGDLD F++  L  +
Sbjct: 308 GHQIRSYVLQPYQLIKDHRTGLETGKVSEVLDGDLDMFIRGYLLAR 353


>gi|322392321|ref|ZP_08065782.1| peptide chain release factor RF2 [Streptococcus peroris ATCC
           700780]
 gi|321144856|gb|EFX40256.1| peptide chain release factor RF2 [Streptococcus peroris ATCC
           700780]
          Length = 325

 Score =  255 bits (651), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 148/325 (45%), Positives = 203/325 (62%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L +  +   ++ +   +  ILL+   E++         
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKHTYNTFHKMDELQDEVEILLDFLAEDESVKDELVEK 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +       +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 61  LDELA--QMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RTN
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTN 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 FEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|154253713|ref|YP_001414537.1| peptide chain release factor 2 [Parvibaculum lavamentivorans DS-1]
 gi|154157663|gb|ABS64880.1| peptide chain release factor 2 [Parvibaculum lavamentivorans DS-1]
          Length = 322

 Score =  255 bits (651), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 208/309 (67%), Positives = 245/309 (79%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRER  L+ AI   + ++  L DNL L+E+   E D +I+ E    L+  +      + E
Sbjct: 2   MRERTRLEEAIGRYRALEASLNDNLELIEMGEAEGDAAIVAEAEAALKAARDVAAEAEIE 61

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD+ND Y+E+HAGAGGTESQDWA MLLRMYTRWAE++ +K E +E HDGEEAGI
Sbjct: 62  TLLSGEADANDTYVEIHAGAGGTESQDWAQMLLRMYTRWAERKGYKVELMERHDGEEAGI 121

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+KG NA+GWLK E GVHRLVRISPYDS +RRHTSFSS+WVYPVVDD I+IE+SE
Sbjct: 122 KSATILVKGHNAFGWLKTESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDKIDIEVSE 181

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VV CQ ERSQHKN+A AW+MLRA+LY
Sbjct: 182 ADVRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVACQNERSQHKNRATAWDMLRARLY 241

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E ELQKRE+ A    S KT+IGWG QIRSYVLQPYQMVKDLRT +E +    VL GDLD 
Sbjct: 242 EAELQKREDAAAAQASGKTDIGWGHQIRSYVLQPYQMVKDLRTGVETSDTDGVLGGDLDP 301

Query: 346 FMKATLAIK 354
           FM A LA +
Sbjct: 302 FMAAALAAR 310


>gi|284029674|ref|YP_003379605.1| peptide chain release factor 2 [Kribbella flavida DSM 17836]
 gi|283808967|gb|ADB30806.1| peptide chain release factor 2 [Kribbella flavida DSM 17836]
          Length = 373

 Score =  255 bits (650), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 146/354 (41%), Positives = 215/354 (60%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D D   + ++ L  +   P LW +   A+ +      L   +  +  
Sbjct: 12  QLDATLTSIEKVLDLDALRREIADLGEQVAAPDLWDDQANAQKVTSRLSSLQADVERVTN 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ R+ D  +++EL+ EE+D   L E+   +  +   ++  +  +LLSGE D  +A + +
Sbjct: 72  LRSRIDDLGVMIELSREENDADSLAESEKEIAALAKSIQSLEVRTLLSGEYDEREALVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A ML RMY RWAE+  + TE  +    EEAG+KS T  +K P AYG L
Sbjct: 132 RSGAGGVDAADFAEMLQRMYLRWAERHGYPTEVYDTSYAEEAGLKSTTFGVKAPYAYGTL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V PV++ + EI++ E + RID YR+SG GGQ
Sbjct: 192 SVESGTHRLVRISPFDNQGRRQTSFAAVEVVPVLEQTDEIDVPEEELRIDVYRSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTG VV CQ E+SQ +NKA A  +L+AKL  L+  +     +    
Sbjct: 252 SVNTTDSAVRITHLPTGTVVSCQNEKSQLQNKASAMVILKAKLLALKKAEERAQIDALRG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +  WG Q+RSYVL PYQMVKDLRT  E  + S V DG++DDF++A +  ++
Sbjct: 312 D-VQGSWGDQMRSYVLHPYQMVKDLRTQYESGNTSGVFDGEIDDFVEAGIRWRR 364


>gi|166155548|ref|YP_001653803.1| peptide chain release factor 2 [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|238687484|sp|B0BC97|RF2_CHLTB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|165931536|emb|CAP07112.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 368

 Score =  255 bits (650), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 160/350 (45%), Positives = 211/350 (60%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L       D +     L  L  +      W +V  A  +      L   +S   E+
Sbjct: 12  LLEGLALTRRSLDPEGKENELKELEQQAVQDGFWDDVARAGKISERIARLKQQLSEFNEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++++      LE      D  + +E        + ++   +   LLSGE D N  +L ++
Sbjct: 72  KNKVSTIQFFLEDEESSKDLEMQKELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DW  M+LRMY RWA    ++ E ++  DGE AGIK  TL + G  AYG+ K
Sbjct: 132 AGAGGTESCDWVEMVLRMYMRWASSHSWRVEVIDRLDGEVAGIKHITLKLVGEYAYGYAK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DSN++RHTSF+S+ V+P +DD IE+EI   D RIDTYR+SGAGGQH
Sbjct: 192 AESGVHRLVRISPFDSNAKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVRITH PTG+VV CQ ERSQ +N+    NMLRA++Y+  LQ+R E  NI   +
Sbjct: 252 VNVTDSAVRITHFPTGIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKN 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
           K EI WG QIR+YV QPY +VKD+RT  E  +   ++DG+ LD F+KA L
Sbjct: 312 KKEISWGSQIRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYL 361


>gi|225450605|ref|XP_002277995.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 434

 Score =  255 bits (650), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 159/352 (45%), Positives = 231/352 (65%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++  ++ +     W   V RL  L+ +   P LW N + A  + RE   L   +  +K +
Sbjct: 72  IALSIHLIKKRLQWKKLVVRLDVLSAQLNKPDLWDNPVHAGKISREHGMLMGKMKGVKNL 131

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L +++ +++LA EE+D  +  E+   L  ++   + K+ E+LL+G+ DS   Y+EV 
Sbjct: 132 EQELLEHIDMVKLAREENDPELESESLKALLGMRRNSKEKELEALLAGDHDSCSCYIEVQ 191

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA M+++MY  WA++R +    ++   GE AGIK AT+ + G  ++G+ K
Sbjct: 192 AGAGGTESMDWAAMVMQMYKMWAQRRGYGVTVVDEMPGETAGIKRATIKVDGEYSFGYAK 251

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+DS  RRHTSF+++ V P+  D S  ++I+ESD RI+ +RA GAGGQ
Sbjct: 252 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDASSHVQINESDLRIERFRAGGAGGQ 311

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTT+SAVRI HIPTGV   CQ ERSQH+NKA A  +L+++L +LE+ ++ +I      
Sbjct: 312 HVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQLEISRQAQINAQHTQ 371

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           S T+I WG QIR+YVL PY+MVKDLRTN E + P  VL+GDLD F+ + L+ 
Sbjct: 372 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSA 423


>gi|206601601|gb|EDZ38084.1| Peptide chain release factor 2 [Leptospirillum sp. Group II '5-way
           CG']
          Length = 370

 Score =  255 bits (650), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 167/346 (48%), Positives = 233/346 (67%), Gaps = 5/346 (1%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD D     L  ++ +++ P  W++   A+ ++RE+  L+  +S I+ I     D  
Sbjct: 11  GGIFDADRLKVTLEQIDAQSQSPEFWKDSDRARKMLREKSRLEKRLSLIQGIDREDADIR 70

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L ELA + D  + L             V+  + E +LS     N A+LE+H GAGGTES
Sbjct: 71  ALFELASDPDFLAELSRRVPEFS---ESVKAFELEEILSEAKSDNPAFLEIHPGAGGTES 127

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMY RWAE+     E ++I  GEEAGIKSAT+L++G +A+G+L  E G+HRL
Sbjct: 128 QDWAQMLLRMYIRWAERHGMTVEVIDIQSGEEAGIKSATILVRGEHAFGYLMSESGIHRL 187

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+D+N RRHTSF+S++VYP ++D + +EI + D RIDT+RAS AGGQHVN T SA+
Sbjct: 188 VRISPFDANKRRHTSFTSVFVYPELEDDVPVEIRDEDIRIDTFRASSAGGQHVNKTSSAI 247

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES--SKTEIGW 308
           R+TH+PTG+V+  Q ERSQ +N+  A+ +LRAKLYELE ++++E  +      +K +IGW
Sbjct: 248 RLTHLPTGIVISSQNERSQLQNREMAFKVLRAKLYELEEKRKKEELDKISGAQNKKDIGW 307

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           G QIRSYVLQPYQ++KD RT +E    S+VLDGDLD F++  L  +
Sbjct: 308 GHQIRSYVLQPYQLIKDHRTGLETGKVSEVLDGDLDMFIRGYLLAR 353


>gi|256826989|ref|YP_003150948.1| peptide chain release factor 2 [Cryptobacterium curtum DSM 15641]
 gi|256583132|gb|ACU94266.1| peptide chain release factor 2 [Cryptobacterium curtum DSM 15641]
          Length = 364

 Score =  255 bits (650), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 146/350 (41%), Positives = 206/350 (58%), Gaps = 2/350 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           + +L         D   QRL+ L+ +T  P  W ++  A+ + +E   +   +   +   
Sbjct: 11  AERLTEAHSFLHIDARKQRLAELDQQTAQPGFWDDIDRAQAVSKEASDIRTLLDTYEHAH 70

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D    L+LA ++ D +   + + +     L  +  + ES      D  D  + ++ 
Sbjct: 71  TLLDDWRCALDLAQDDPDFATEAQKAADELSRLL--DDFEIESWFGNRFDEGDCIVTINP 128

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GG E+QDW +ML  MYT++AE R +K   L+   GE  GI+ A+  I+G  AYG L+ 
Sbjct: 129 GSGGLEAQDWCDMLFHMYTKYAENRGWKVRVLDAPLGEVIGIEHASFQIEGRFAYGMLRS 188

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVRISP D   RRHT+F+S+ V PV+ D IE+ ++ +D R+D YRASG GGQ V
Sbjct: 189 EIGVHRLVRISPTDDKKRRHTTFASVEVMPVLPDDIEVNLNPADVRVDVYRASGPGGQCV 248

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVR+THIPTG VV CQ ++SQ +NK  A+ +LRA+L+ELE +KR+E        K
Sbjct: 249 NTTDSAVRLTHIPTGTVVTCQNQKSQLQNKEAAFRILRARLFELEERKRQEEIEALRGEK 308

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            E  +G QIR+YVL PYQMVKDLR+ IE  +   VL GDLD F+      
Sbjct: 309 RENSFGSQIRNYVLYPYQMVKDLRSGIETGNVDAVLGGDLDQFVIGYHRW 358


>gi|327459899|gb|EGF06239.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1057]
          Length = 325

 Score =  255 bits (650), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 147/325 (45%), Positives = 204/325 (62%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   ++   L        ++ +   ++ ILL+   E++      E  
Sbjct: 1   MTEPDFWDDNIAAQKTSQDLNELKQTYENFHQMTELFDESEILLDFLAEDESVQGELEEK 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
                    +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 61  LAELEK--MMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|227549373|ref|ZP_03979422.1| peptide chain release factor 2 [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227078558|gb|EEI16521.1| peptide chain release factor 2 [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 365

 Score =  255 bits (650), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 151/352 (42%), Positives = 216/352 (61%), Gaps = 4/352 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R   L  +  DP LW +   A+ +  E  ++   +  +  +
Sbjct: 12  LDSTLTTIEKVIDLDELAARARELEQQANDPSLWDDPAHAQKVTTELSNVQARLKKVASL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++R+ D  ++ EL    ++        D L  ++  +   + +++LSGE D  +A + + 
Sbjct: 72  RERIDDLPVMYEL---AEEEGEPALVDDELAALEESIGSLEVQTMLSGEYDEREAVVNIR 128

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ DWA ML+RMYTRWAEK   K E  +I   EEAGIKSAT +++G   YG L 
Sbjct: 129 SGAGGVDAADWAEMLMRMYTRWAEKNGHKVEVYDISYAEEAGIKSATFVVRGEYMYGQLS 188

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I +SD R+D YR+SG GGQ 
Sbjct: 189 VEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDHIDIPDSDIRVDVYRSSGPGGQS 248

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ E+SQ +NKA A  +L++KL E + Q+ +   +   + 
Sbjct: 249 VNTTDSAVRITHLPTGIVVTCQNEKSQIQNKASALGVLQSKLLERKRQEEKAEMDALGAG 308

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                WG Q+RSYVL PYQMVKDLRTN E   P  VLDGD+D F+++ +  +
Sbjct: 309 -GNASWGNQMRSYVLHPYQMVKDLRTNYEVGDPQKVLDGDIDGFLESGIRWR 359


>gi|116074014|ref|ZP_01471276.1| peptide chain release factor 2 [Synechococcus sp. RS9916]
 gi|116069319|gb|EAU75071.1| peptide chain release factor 2 [Synechococcus sp. RS9916]
          Length = 356

 Score =  255 bits (650), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 145/341 (42%), Positives = 204/341 (59%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      R   L      P  W +   A+  MR    +   +  + + +  + D  
Sbjct: 3   RTVFDVPALKARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAQLEQLNQWKRAVDDAD 62

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +EL   E D  +L E    L +++ E++  + E LLSGE D   A L ++AGAGGT++
Sbjct: 63  ATVELYALEPDDDMLGEAQTGLTQLRTELDRWELERLLSGEYDKEGAVLSINAGAGGTDA 122

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA ML+RMYTRWAE    K    E+ +GEEAGIKS T+ I+G  AYG+L+ E+G HRL
Sbjct: 123 QDWALMLMRMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRL 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+++N +R TSF+ + V P +++ ++++I E D  I T R+ GAGGQ+VN  ++AV
Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKIEEDVQLDIPEKDLEITTSRSGGAGGQNVNKVETAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI HIPTG+ V+C QERSQ +NK +A  +L AKL  +  ++R            E  WG 
Sbjct: 243 RILHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIR+YV  PYQMVKDLRT  E      V+DGDLD F+++ L
Sbjct: 303 QIRNYVFHPYQMVKDLRTQHETNDVQGVMDGDLDPFIQSLL 343


>gi|54297691|ref|YP_124060.1| hypothetical protein lpp1742 [Legionella pneumophila str. Paris]
 gi|53751476|emb|CAH12894.1| hypothetical protein lpp1742 [Legionella pneumophila str. Paris]
          Length = 335

 Score =  255 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 175/330 (53%), Positives = 230/330 (69%), Gaps = 1/330 (0%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             +  + E  ++W N  +A+ L RER  L+  +  + ++   + D   L ELA EEDD  
Sbjct: 2   EEVIRELESSNVWDNPEQAQALGRERTQLETIVHSLSQLSQSISDQRELFELAREEDDEQ 61

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
            + +  D L+ I+ +V   +F  + SG+ D ++AYL++ AG+GGTE+QDWA MLLRMY R
Sbjct: 62  TIIDIGDELKSIEQQVASLEFRRMFSGKMDHSNAYLDIQAGSGGTEAQDWAEMLLRMYLR 121

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           W E   F TE +E   GE AGIKSAT+   G  A+GWL+ E GVHRLVR SP+DS +RRH
Sbjct: 122 WGEHHGFTTELIECSPGEVAGIKSATIHFTGEYAFGWLRTETGVHRLVRKSPFDSGNRRH 181

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSF++++V P +DD IEIEI+ +D RIDTYRASGAGGQHVN TDSAVRITHIP+G+VVQC
Sbjct: 182 TSFAAVFVSPEIDDDIEIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHIPSGIVVQC 241

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           Q +RSQHKNK QA   LRAKLYELE+QK+       E++K++IGWG QIRSYVL     +
Sbjct: 242 QNDRSQHKNKDQAMKQLRAKLYELEMQKKNAEQQALEATKSDIGWGSQIRSYVLD-QSRI 300

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           KDLRT +E ++   VLDG LD F++A+L  
Sbjct: 301 KDLRTGVETSNTQAVLDGSLDQFIEASLKA 330


>gi|297620623|ref|YP_003708760.1| Peptide chain release factor 2 [Waddlia chondrophila WSU 86-1044]
 gi|297375924|gb|ADI37754.1| Peptide chain release factor 2 [Waddlia chondrophila WSU 86-1044]
          Length = 326

 Score =  255 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 159/323 (49%), Positives = 212/323 (65%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E    W +   A+ ++ E   L       KE++ RL D   L   A E  D  +L + +
Sbjct: 1   MEAAGFWDDPDAAQQVITEINSLKQWTIPCKELKRRLEDVKELQPEAEEAGDEGLLADLN 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L RI+ E+   +   +LSGE D+ + YL ++AGAGGTE+ DW  ML RMY RW +KRK
Sbjct: 61  QELFRIENELGELEIRRMLSGELDNKNCYLSINAGAGGTEACDWVEMLSRMYQRWCDKRK 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K E +++  GE AG KS TL + G  A+G+ K E+GVHRLVRISP+DS SRRHTSF+S+
Sbjct: 121 WKCEVVDMVPGEVAGTKSVTLKMTGNFAFGYSKAEKGVHRLVRISPFDSGSRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + D I+IEI+  D RIDT+RASGAGGQHVN TDSAVR+THIPTGVVV CQ +RSQ
Sbjct: 181 DVTPEITDDIQIEINPDDIRIDTFRASGAGGQHVNVTDSAVRMTHIPTGVVVSCQSQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           ++NK   + +L++KLYE+E+ +RE+        K +IGWG QIR+YV  PY +VKD RT 
Sbjct: 241 NQNKEACFKILKSKLYEMEVMEREKKIKELGGEKMDIGWGSQIRNYVFHPYSLVKDTRTK 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
           +E  +   V+DG LD F+ A L 
Sbjct: 301 VESANVQAVMDGSLDLFVNAYLK 323


>gi|268316864|ref|YP_003290583.1| LigA [Rhodothermus marinus DSM 4252]
 gi|262334398|gb|ACY48195.1| LigA [Rhodothermus marinus DSM 4252]
          Length = 371

 Score =  255 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 153/356 (42%), Positives = 225/356 (63%), Gaps = 7/356 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +++ LG   D     ++++ LN +   P  W N   A+ + ++    ++ ++  +++
Sbjct: 8   LLERVDTLGRFLDIPGRKEKIAKLNEERLAPGFWDNPERAREVEKQIAEEESWVAAWEQL 67

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + +  D   LLEL  EE D ++ +E +  + R++ +++  +  SLL+   D  +A L +H
Sbjct: 68  RRQADDVQTLLELQQEEPDANLEEEIAREVARLEQQLDELELRSLLTDPDDHRNAILTIH 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA MLLRMYTRW E+  +  E LE   G+ AGIKSATL I GP AYG+LK
Sbjct: 128 PGAGGTESQDWAEMLLRMYTRWGERHGYDVELLEYQAGDVAGIKSATLRIAGPYAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+D++ RRHTSF+S++VYP +DDSIE++I   +  + T+R+ G GGQ+
Sbjct: 188 GESGVHRLVRISPFDASGRRHTSFASVFVYPEIDDSIEVDIRPDEIEMQTFRSGGKGGQN 247

Query: 243 VNTTDSAVRITHI-------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           VN  ++ VR+             VV +C +ERSQ +N+ +A  ML++++Y+LE + RE  
Sbjct: 248 VNKVETGVRLIWHGKLSNGEEARVVAECTEERSQLQNRQRALTMLKSRIYQLEREIREAE 307

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               ES K +I WG QIRSYV QPY MV D RT  + T    V+DGDLD F++A L
Sbjct: 308 KRKRESQKKKIEWGSQIRSYVFQPYTMVNDHRTETKVTDVQAVMDGDLDPFIRAYL 363


>gi|257867488|ref|ZP_05647141.1| peptide chain release factor 2 [Enterococcus casseliflavus EC30]
 gi|257873817|ref|ZP_05653470.1| peptide chain release factor 2 [Enterococcus casseliflavus EC10]
 gi|257801544|gb|EEV30474.1| peptide chain release factor 2 [Enterococcus casseliflavus EC30]
 gi|257807981|gb|EEV36803.1| peptide chain release factor 2 [Enterococcus casseliflavus EC10]
          Length = 329

 Score =  255 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 161/325 (49%), Positives = 216/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +  +A+ ++              ++ + L +  ++LE+  EE D  +  E  
Sbjct: 1   MAHPTFWDDSEKAQQVINANNANKETYDQFNQLAEELEELEVMLEMIQEEADPEMEAELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             + ++  ++   +   LL    D N+A +E+H GAGGTESQDW +MLLRMYTR+ E+  
Sbjct: 61  ARITKLNEKMASYELSMLLDEPYDRNNAIIELHPGAGGTESQDWGSMLLRMYTRFCEQHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           ++ E L+   G+EAGIKS TLL+KG NAYG+LK E+GVHRLVRISP+DS  RRHTSF S+
Sbjct: 121 YQVETLDYQAGDEAGIKSVTLLVKGHNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D +I++EI+  D +IDTYRASGAGGQH+N T+SAVRITHIPTG VV  Q +RSQ
Sbjct: 181 DVMPELDGAIDVEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML+AKLY+LE++K+E+ A      + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQLEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L +K
Sbjct: 301 FETGNVQAVMDGDLDGFIDAYLKLK 325


>gi|242279065|ref|YP_002991194.1| hypothetical protein Desal_1593 [Desulfovibrio salexigens DSM 2638]
 gi|242121959|gb|ACS79655.1| hypothetical protein Desal_1593 [Desulfovibrio salexigens DSM 2638]
          Length = 372

 Score =  255 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 162/343 (47%), Positives = 225/343 (65%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
           + +N  GG+FD   + +RL  +      P  W        ++RE+  L+  ++    +  
Sbjct: 16  QNMNPSGGVFDHAQSKERLEEIEHDLSKPGAWDKPDALTPVLREKSMLEEKVTSYDNLTS 75

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              D    L +A E+ D  IL+  S+N++++   VE  +  +LLSG  D + A LE+H G
Sbjct: 76  SKDDVEEWLMMASEDQDQEILEALSENVEKLAKLVEQTELAALLSGPEDKSTAILEIHPG 135

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG ESQDWA MLLRMY RWA+KR +KT  L+    +EAGIKS TL I+G  AYG+LKGE
Sbjct: 136 AGGIESQDWAEMLLRMYLRWADKRNWKTSYLDYQPDDEAGIKSVTLRIEGLYAYGFLKGE 195

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G+HRL+RISP+D++ RRHTSF+S+ VYP +   IEIE+ + D R+D +RASG GGQHVN
Sbjct: 196 AGIHRLIRISPFDASGRRHTSFASVDVYPEISQDIEIEVKDEDIRLDVFRASGPGGQHVN 255

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T+SAVRITH+PT +VVQCQ E+SQ KNK  A  +L+++LYE EL+++EE      ++K 
Sbjct: 256 KTNSAVRITHLPTNIVVQCQNEKSQLKNKETAMKVLKSRLYEQELKRQEESKRADYATKD 315

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            IG+G QIR+Y LQPY++VKD R   E  +   VLDG+LD  +
Sbjct: 316 SIGFGSQIRTYTLQPYRLVKDHRCGAEDGNVEAVLDGELDGLI 358


>gi|183219678|ref|YP_001837674.1| peptide chain release factor 2 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189909814|ref|YP_001961369.1| peptide chain release factor 2 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167774490|gb|ABZ92791.1| Peptide chain release factor 2 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167778100|gb|ABZ96398.1| Peptide chain release factor 2 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 375

 Score =  255 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 227/352 (64%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++           ++     RL  L  K  DP LW +  +AK + ++R  L   +     
Sbjct: 14  EMIESFQTYWTAQNFQEDYDRLLSLIEKANDPKLWDSPDQAKNVTQKRNELQMKLDPWLG 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D   L+EL  EE   S L+  +D+  R+    E  Q    LSG+ D   A++ +
Sbjct: 74  LKKELLDFPDLIELTSEEMGESGLKSLNDDFDRMFESFENLQMLDALSGKDDGKAAFINI 133

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA+MLLRMYTR+AE++ ++ E ++   GE AGIK+ATL I+G + +G+L
Sbjct: 134 HPGAGGTESQDWADMLLRMYTRFAEQKGYRAELVDYQPGETAGIKNATLYIQGDHPFGYL 193

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+DSN RRHTSF+S++V P VDD I++ I E D R+D YR+SGAGGQ
Sbjct: 194 KCESGVHRLVRISPFDSNKRRHTSFASVYVTPEVDDDIQVNIEEKDLRVDVYRSSGAGGQ 253

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTGVVV CQ ERSQ KN+  A  ML+A+LYE+E QK EE       
Sbjct: 254 HVNTTDSAVRITHIPTGVVVSCQMERSQIKNRDTAMKMLKARLYEMEKQKAEEENAKKAG 313

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            K +I WG QIRSYV  PY +VKD RT+ E  +   V+DGDL+DF+ A L  
Sbjct: 314 EKRDIAWGSQIRSYVFHPYNLVKDHRTDFETGNVHAVMDGDLEDFIIAYLKY 365


>gi|62184808|ref|YP_219593.1| peptide chain release factor 2 [Chlamydophila abortus S26/3]
 gi|81313013|sp|Q5L6U9|RF2_CHLAB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|62147875|emb|CAH63621.1| putative peptide chain release factor 2 [Chlamydophila abortus
           S26/3]
          Length = 368

 Score =  255 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 162/358 (45%), Positives = 222/358 (62%), Gaps = 8/358 (2%)

Query: 3   LSRQLNCL-------GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA 55
           L ++L  L       G   D +   Q LS L  +T     WQ+V  A  +      L   
Sbjct: 5   LDKRLEGLLTGLALAGRSLDLEGKRQELSILEEQTLKEDFWQDVTSAGKVSERIVSLKRQ 64

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           I+  +E + R+ +    L       D  + ++        +  +   + + LLSGE D N
Sbjct: 65  IAHYEEFKVRVENLAFFLNDGDVSADPELREDLEKEFTICEHILSEWETQRLLSGEVDKN 124

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
             +L ++AGAGGTES DW  ML RMY RWA + ++K E ++  +G+ AGIK  T+   G 
Sbjct: 125 PCFLTINAGAGGTESCDWVEMLFRMYCRWAAQHQWKVEVIDRQEGDVAGIKHVTVKFSGD 184

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYG+ K E+GVHRLVRISP+DSN++RHTSF+S+ VYP +DD IEI+I  +D RIDT+R+
Sbjct: 185 YAYGYAKAERGVHRLVRISPFDSNAKRHTSFASVDVYPEIDDEIEIDIRPNDLRIDTFRS 244

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN TDSAVRITHIPTG++V CQ+ERSQ +N+     MLRA++Y+  LQ+R E 
Sbjct: 245 SGAGGQHVNVTDSAVRITHIPTGIMVSCQRERSQIQNRESCMKMLRARMYQQILQERLEK 304

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
             +   +K EI WG QIR+YV QPY +VKD+RT  E  +   ++DG+ LDDF+KA LA
Sbjct: 305 QLLDRKNKKEIAWGSQIRNYVFQPYTLVKDVRTGHETGNVQAMMDGELLDDFVKAYLA 362


>gi|295395219|ref|ZP_06805427.1| peptide chain release factor RF2 [Brevibacterium mcbrellneri ATCC
           49030]
 gi|294971981|gb|EFG47848.1| peptide chain release factor RF2 [Brevibacterium mcbrellneri ATCC
           49030]
          Length = 376

 Score =  255 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 145/352 (41%), Positives = 214/352 (60%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L +  + +  + D +     ++ L      P LW +   A+ +  +  H    +  +++ 
Sbjct: 12  LQQTFSSIREVSDVEQLKSEVAELTEAAAAPDLWDDPDVAQAITSKLSHKQGTLEKLQKF 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             R+ D  +L+ +  +E D   L E +  ++++K E+   +  +LLSGE D   A + V 
Sbjct: 72  DQRIEDVELLVSMGEDEGDEDALNEAAAEVEKLKSELAALEISTLLSGEFDERSAVITVR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ DWA ML RMY RWAE R +K E L+    E AG+KSAT+ +  P AYG L 
Sbjct: 132 AGAGGDDATDWAQMLTRMYIRWAENRGYKVEELDTSYAEGAGVKSATVQVNAPYAYGTLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++ +  I+I E+D RID +R+SG GGQ 
Sbjct: 192 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIEQTDHIDIDENDLRIDVFRSSGPGGQS 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTGVVV  Q E+SQ +N+A A  +L+++L +L+ ++ E         
Sbjct: 252 VNTTDSAVRITHVPTGVVVSMQNEKSQIQNRAAAMRVLQSRLLQLKREEEEAQKKDLAGD 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  WG Q+RSYV  PYQMVKDLRT  E  +P  V DGD+DDF++A +  +
Sbjct: 312 -IKASWGDQMRSYVTHPYQMVKDLRTGYEVNNPQAVFDGDIDDFLEAGIRWR 362


>gi|320531255|ref|ZP_08032234.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320136522|gb|EFW28491.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 373

 Score =  255 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 146/357 (40%), Positives = 212/357 (59%), Gaps = 4/357 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L      +  + D +    R++ L+ +   P LW +   A+++     H    +  ++ 
Sbjct: 11  RLRHTYASIAAVTDPEALRARIAELSEQASAPDLWDDPDSAQVVTSALSHAQADLKRVES 70

Query: 62  IQDRLCDNL---ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           + +R+ D      L      ED   IL E   +L  I  ++   +  +LLSGE D  DA 
Sbjct: 71  LGERIEDLEAMVELAGEEEGEDAAEILAEAEADLSAISKDLSELEIRTLLSGEYDPRDAV 130

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ D+A MLLRMYTRWAE+ ++  + L     EEAG+KS T  I  P AY
Sbjct: 131 ITIRSGAGGVDAADFAEMLLRMYTRWAERHEYPVKVLNTSYAEEAGLKSVTFEIHAPYAY 190

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  I+I E+D RID +R+SG 
Sbjct: 191 GTLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHIDIPETDIRIDVFRSSGP 250

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +N+A A  +L+++L  L+ Q+ +     
Sbjct: 251 GGQSVNTTDSAVRITHLPTGLVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQQEEDAKKKE 310

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                 +  WG Q+RSYVL PYQMVKDLRTN E  +P  V DGD+D F+ A +  +K
Sbjct: 311 LAGD-VKASWGDQMRSYVLNPYQMVKDLRTNFEVGNPDSVFDGDIDGFIDAGIRWRK 366


>gi|15605186|ref|NP_219972.1| peptide chain release factor 2 [Chlamydia trachomatis D/UW-3/CX]
 gi|76789195|ref|YP_328281.1| peptide chain release factor 2 [Chlamydia trachomatis A/HAR-13]
 gi|7388051|sp|O84465|RF2_CHLTR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|123606855|sp|Q3KLN9|RF2_CHLTA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|3328893|gb|AAC68059.1| Peptide Chain Release Factor 2 [Chlamydia trachomatis D/UW-3/CX]
 gi|76167725|gb|AAX50733.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
           A/HAR-13]
          Length = 369

 Score =  255 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 161/342 (47%), Positives = 212/342 (61%), Gaps = 1/342 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             LFD +     L  L  +      W +V+ A  +      L   +S   E+++++    
Sbjct: 21  RSLFDPEGKENELKELEQQAVQDGFWDDVVRAGKISERIARLKQQLSEFNELKNKVSAIQ 80

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             LE      D  + +E        + ++   +   LLSGE D N  +L ++AGAGGTES
Sbjct: 81  FFLEDEESSKDLEMQKELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTES 140

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DW  MLLRMY RWA    ++ E ++  DGE AGIK  TL + G  AYG+ K E GVHRL
Sbjct: 141 CDWVEMLLRMYMRWASSHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRL 200

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+DSN++RHTSF+S+ V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAV
Sbjct: 201 VRISPFDSNAKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAV 260

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PTG+VV CQ ERSQ +N+    NMLRA++Y+  LQ+R E  NI   +K EI WG 
Sbjct: 261 RITHFPTGIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGS 320

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
           QIR+YV QPY +VKD+RT  E  +   ++DG+ LD F+KA L
Sbjct: 321 QIRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYL 362


>gi|191637822|ref|YP_001986988.1| Peptide chain release factor 2 (RF-2) [Lactobacillus casei BL23]
 gi|190712124|emb|CAQ66130.1| Peptide chain release factor 2 (RF-2) [Lactobacillus casei BL23]
          Length = 332

 Score =  255 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 147/325 (45%), Positives = 210/325 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W +   A+ ++     L         +++ L D     EL  +E D  + QE  
Sbjct: 1   MAEPGFWDDSEAAQKVIDNNNALKEKHDRFYALENELEDLEAGFELLQDEPDKDLQQEEE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ ++ +++  + + LL+G  D N+A LE+H GAGGTESQDW +ML+RMY RWA++  
Sbjct: 61  AKIKDLQEKLDKYEMQLLLNGPYDHNNAILEIHPGAGGTESQDWGSMLMRMYQRWADQNG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E  +   G+EAGIKS TLLI G NAYG LK E+GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 FKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEKGVHRLVRISPFDSAGRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D+SIE+++   D +++ +R+SGAGGQH+N T SAVR+ H+PTG+V   Q +RSQ
Sbjct: 181 DVMPELDNSIEVDLRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHLPTGIVTSSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NKA A  ML+AKLY+ E + +   A   +  + ++ +G QIRSYV  PY MVKD RTN
Sbjct: 241 FQNKATAMAMLKAKLYQREEEAKRAKAKAIQGEQKDVAFGSQIRSYVFHPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  + + V+DGDL+ F+ A L  +
Sbjct: 301 YETGNGNAVMDGDLNPFINAYLQWE 325


>gi|239981919|ref|ZP_04704443.1| peptide chain release factor 2 [Streptomyces albus J1074]
          Length = 355

 Score =  255 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 154/349 (44%), Positives = 214/349 (61%), Gaps = 1/349 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  +  + D D     ++ L  +   P LW +   A+ +  +  HL   +   + ++ RL
Sbjct: 1   MESIEAVLDLDRLRAEIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTEALRSRL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D  +L ELA  EDD     E    L  ++  ++  +  +LLSGE D+ +A + + A AG
Sbjct: 61  DDLGVLFELAEAEDDADTRAEAESELASVRKALDEMEVRTLLSGEYDAREALVNIRAEAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G ++ D+A  L RMY RWAE+R +KTE  E    EEAGIKS T  ++ P AYG L  EQG
Sbjct: 121 GVDAADFAEKLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAVQAPYAYGTLSVEQG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI ES+ R+D YR+SG GGQ VNTT
Sbjct: 181 THRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIEIDESELRVDVYRSSGPGGQGVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVR+TH+PTG+VV CQ ERSQ +NKA A N+L+AKL E   Q+ +   +  +      
Sbjct: 241 DSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQEEQAKMDALKGDGGN- 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            WG Q+RSYVL PYQMVKDLRT  E  +P  V +G++D F++A +  +K
Sbjct: 300 SWGNQMRSYVLHPYQMVKDLRTEEEMGNPEAVFNGEIDGFLEAGIRWRK 348


>gi|227356361|ref|ZP_03840749.1| peptide chain release factor 2 [Proteus mirabilis ATCC 29906]
 gi|227163471|gb|EEI48392.1| peptide chain release factor 2 [Proteus mirabilis ATCC 29906]
          Length = 320

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 176/318 (55%), Positives = 227/318 (71%), Gaps = 1/318 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W    +A+ L +ER  L+  +  I +++  L D   LL+LA+E DD     E    L+ +
Sbjct: 2   WNEPEKAQALGKERSSLEAIVETIDQLEQGLEDVSGLLDLAVEADDEETFNEAVAELEGL 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
             ++E  +F  + SGE DS D YL++ AG+GGTE+QDWA+ML+RMY RWAE R FKTE +
Sbjct: 62  NKKLEQLEFRRMFSGEYDSADCYLDLQAGSGGTEAQDWASMLMRMYLRWAESRGFKTEII 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E  DG+ AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP V
Sbjct: 122 EESDGDVAGLKSATIKIIGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEV 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD+I+IEI+ +D RID YRASGAGGQHVN T+SAVRITH+PTG+V QCQ +RSQHKNK Q
Sbjct: 182 DDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHVPTGLVTQCQNDRSQHKNKDQ 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A   ++AKLYELE+QK+     + E +K++IGWG QIRSYVL     +KDLRT +E  + 
Sbjct: 242 AMKQMKAKLYELEMQKKNADKQVMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNT 300

Query: 336 SDVLDGDLDDFMKATLAI 353
             VLDGDLD F++A+L  
Sbjct: 301 QAVLDGDLDKFIEASLKA 318


>gi|260771153|ref|ZP_05880080.1| peptide chain release factor 2 [Vibrio furnissii CIP 102972]
 gi|260613750|gb|EEX38942.1| peptide chain release factor 2 [Vibrio furnissii CIP 102972]
 gi|315179241|gb|ADT86155.1| peptide chain release factor 2 [Vibrio furnissii NCTC 11218]
          Length = 320

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 169/317 (53%), Positives = 224/317 (70%), Gaps = 1/317 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W     A+ L +ER  L+  +  I ++   + D   LLELA+E +D     E    L+ +
Sbjct: 2   WNEPERAQALGKERSSLEAVVETIDQLDQGVDDVEGLLELAVEAEDQETFDEIGPELEEL 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           + ++   +F  + SG+ DS+D YL++ AG+GGTE+QDW +M+LRMY RWA+ + FKTE +
Sbjct: 62  ESKLAKLEFRRMFSGDHDSSDCYLDLQAGSGGTEAQDWTSMMLRMYLRWADAKGFKTEVI 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E+ +G+ AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S +VYP +
Sbjct: 122 EVSEGDVAGLKSATVRIVGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFVYPEI 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD+I I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK Q
Sbjct: 182 DDNIAIDINPADLRIDVYRASGAGGQHVNTTESAVRITHLPTNTVVQCQNDRSQHKNKDQ 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A   LRAKL+ELELQK+       E +K++IGWG QIRSYVL     +KDLRT +E  + 
Sbjct: 242 AMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNT 300

Query: 336 SDVLDGDLDDFMKATLA 352
             VLDGDLD F++A+L 
Sbjct: 301 QAVLDGDLDKFIEASLK 317


>gi|313675052|ref|YP_004053048.1| bacterial peptide chain release factor 2 (brf-2) [Marivirga
           tractuosa DSM 4126]
 gi|312941750|gb|ADR20940.1| bacterial peptide chain release factor 2 (bRF-2) [Marivirga
           tractuosa DSM 4126]
          Length = 363

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 146/350 (41%), Positives = 212/350 (60%), Gaps = 2/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  L G  D++  V+ +  L   +  P  W +  EA+  M+  Q L        E+
Sbjct: 9   LKARVEALRGYLDYNKKVEEIKELELVSAQPDFWNDSDEAEKTMKVIQGLKEWTKHFDEL 68

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            +   +     E     +        +      K   E  + + +LS E D   A L++ 
Sbjct: 69  SELYGEVETYYEFLEMGESSEEEVSKAYKKALTK--TEELELKKMLSSEEDQLSAMLQIT 126

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA +L+RMY  W E   +K   ++  +G+ AG+KS TL   GP AYG+LK
Sbjct: 127 PGAGGTESNDWAGILMRMYIMWGEANGYKVREVDFQEGDVAGVKSVTLEFDGPQAYGFLK 186

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DS  RRHTSF+S++VYPVVDDSIEI+I  +D  + T R+ GAGGQ+
Sbjct: 187 SENGVHRLVRISPFDSGGRRHTSFASVYVYPVVDDSIEIDIHPNDVELHTSRSGGAGGQN 246

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++ V++TH PTG+VV CQ  R+Q  N+ +A  ML+++LY++E++KR    N  E+ 
Sbjct: 247 VNKVETKVQLTHKPTGIVVVCQANRTQLGNREEAMKMLKSQLYQIEVEKRSAERNEVEAG 306

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K +I +G QIR+YVL PY+++KD RT +E+T   +VLDGDL+D++KA L 
Sbjct: 307 KKKIDFGSQIRNYVLHPYKLIKDARTGVERTDVQNVLDGDLNDYIKAYLM 356


>gi|160944128|ref|ZP_02091358.1| hypothetical protein FAEPRAM212_01630 [Faecalibacterium prausnitzii
           M21/2]
 gi|158444804|gb|EDP21808.1| hypothetical protein FAEPRAM212_01630 [Faecalibacterium prausnitzii
           M21/2]
 gi|295105045|emb|CBL02589.1| bacterial peptide chain release factor 2 (bRF-2) [Faecalibacterium
           prausnitzii SL3/3]
          Length = 373

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 147/350 (42%), Positives = 218/350 (62%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           ++ +  L      + + +R+  L      P  + +   +K +  E   L   ++  +++Q
Sbjct: 15  AKAVKDLEEALAIEASRKRVQELEHTMSRPGFYDDAELSKKVFDEVGDLKGKLNRFEKLQ 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
               D   +LE+  EE D +++ E  + +  +   VE  Q  ++L+GE D ++A L  HA
Sbjct: 75  GLYDDAETMLEMLDEEYDPAMIPEAEEAVNTVGKAVEELQLMTMLNGEYDHSNAILTFHA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G GGTE+QDWA ML RMY +WA+      E L+  DG+EAG+KSA++++KG NAYG LK 
Sbjct: 135 GTGGTEAQDWAEMLYRMYNKWAQAHGMTVEVLDYQDGDEAGLKSASMMVKGANAYGLLKS 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SP+D+N+RR TSF+S+ V P +D++I++ I   D  +  YR+SGAGGQH+
Sbjct: 195 ENGVHRLVRVSPFDANARRQTSFASLEVMPELDNTIQVNIRPEDIEMQVYRSSGAGGQHI 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVR+ H PTG+VV CQ +RSQ +N+  A  ML+AKLY++  Q+  +  +  +  +
Sbjct: 255 NKTSSAVRLIHKPTGIVVNCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKGVQ 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            EI WG QIRSYV  PY MVKD RTN E  +   V+DGD+D+F+ A L  
Sbjct: 315 NEIAWGHQIRSYVFMPYTMVKDHRTNYETGNVDAVMDGDIDEFIFAYLKA 364


>gi|134095412|ref|YP_001100487.1| peptide chain release factor 2 [Herminiimonas arsenicoxydans]
 gi|133739315|emb|CAL62364.1| Peptide chain release factor 2 (RF-2) [Herminiimonas
           arsenicoxydans]
          Length = 325

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 173/324 (53%), Positives = 231/324 (71%), Gaps = 1/324 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            EDP +W +   A+ L +E++ L+  +  + ++   L D   L E+A EE+D   +    
Sbjct: 1   MEDPKVWDDPKRAQDLGKEKKSLEAIVHTLIKVDAELKDAHDLFEMAREENDEDTIVAIE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            + Q +   VE  +F  + SG  D+N+ ++++ AGAGGTE+QDWA+MLLR Y R+ E++ 
Sbjct: 61  ADTQELLKTVEGMEFRRMFSGPMDANNCFIDIQAGAGGTEAQDWASMLLRQYLRYCERKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E LE  DGE AGIK+ATL ++G  AYG L+ E GVHRLVR SP+DS + RHTSFSS+
Sbjct: 121 FKVEILEQSDGEVAGIKTATLKVEGEYAYGLLRTETGVHRLVRKSPFDSANGRHTSFSSL 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           +VYP VDDSIEI+I+ +D RIDTYRASGAGGQH+N TDSAVR+TH P+G+VVQCQ +RSQ
Sbjct: 181 FVYPEVDDSIEIDINPADVRIDTYRASGAGGQHINKTDSAVRLTHGPSGIVVQCQNDRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H+NKA+AW+ML+AKL+ELE++ R       E SKT++GWG QIRSYVL     +KDLRTN
Sbjct: 241 HRNKAEAWDMLKAKLFELEMRNRMSEQQKLEDSKTDVGWGHQIRSYVLD-QSRIKDLRTN 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  +   VLDGDLDDF+ A+L  
Sbjct: 300 FETGNTKAVLDGDLDDFIAASLKQ 323


>gi|319954923|ref|YP_004166190.1| bacterial peptide chain release factor 2 (brf-2) [Cellulophaga
           algicola DSM 14237]
 gi|319423583|gb|ADV50692.1| bacterial peptide chain release factor 2 (bRF-2) [Cellulophaga
           algicola DSM 14237]
          Length = 366

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 154/351 (43%), Positives = 221/351 (62%), Gaps = 2/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L  L    D D  +  +     KT  P  W N  +A+  M+  Q     +   K  
Sbjct: 11  LLDRLGALRRYLDVDAKLIEIENEQEKTLAPDFWDNPQKAQEHMKYIQSKKKWVDDYKTS 70

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D  +L+E     +     +E      +    +E  +F+++LS E D   A +++ 
Sbjct: 71  ETLANDLEVLIEFQK--EGAITEEEVEKQYTKTLDTIENLEFKNMLSEEGDELPAIIQIT 128

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA ML+RMY  W+EK+ FK + L   +G+  GIK+ TL I G  ++GWLK
Sbjct: 129 AGAGGTESCDWAAMLMRMYMMWSEKKGFKIKELNYQEGDVTGIKTVTLEIDGEFSFGWLK 188

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDSIEI I+ +D  I T R+SGAGGQ+
Sbjct: 189 GENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIAINPADIDITTARSSGAGGQN 248

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++ V++TH P+G+ + C   RSQH+N+A A  ML+++LYE+EL+K+ E     ESS
Sbjct: 249 VNKVETKVQLTHKPSGIQISCSDSRSQHENRATALKMLKSQLYEIELRKKMEARQEIESS 308

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K +I WG QIR+YV+ PY++VKD+RT  E  +   V+DGD+D F+KA L +
Sbjct: 309 KMKIEWGSQIRNYVMHPYKLVKDVRTATETGNVDAVMDGDIDKFLKAFLMM 359


>gi|300114892|ref|YP_003761467.1| peptide chain release factor 2 [Nitrosococcus watsonii C-113]
 gi|299540829|gb|ADJ29146.1| peptide chain release factor 2 [Nitrosococcus watsonii C-113]
          Length = 331

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 172/328 (52%), Positives = 229/328 (69%), Gaps = 1/328 (0%)

Query: 25  FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84
            ++ +   P +W     A+ L +ER  L + +S + E+ + +     L ELA+EEDD   
Sbjct: 2   EVDRELAVPSVWDEPERAQQLGQERAQLQSVVSPLAELGEEIMQAKELFELAVEEDDEGT 61

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
            QE    L  ++  +   +F+ + +GE D N+AYL++ AG+GGTE+QDWA+MLLRMY RW
Sbjct: 62  AQEMIAELDAVEQRLAKLEFQRMFAGEMDPNNAYLDIQAGSGGTEAQDWASMLLRMYLRW 121

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
            EK  FKT   E+ +GE AGIKSAT+  +G  A+GWL+ E GVHRLVR SP+DS +RRHT
Sbjct: 122 GEKHDFKTGLTEVSEGEVAGIKSATIHFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHT 181

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           SF+S++VYP VD+ I+IEI+ +D RIDTYRASGAGGQHVN TDSAVRITH+ + +VVQCQ
Sbjct: 182 SFASVFVYPEVDERIDIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHLSSNLVVQCQ 241

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
            ERSQH+NKA A   LRAKLYELE++ R+      E +K +IGWG QIR+YVL     +K
Sbjct: 242 SERSQHQNKAHAMAQLRAKLYELEMRSRQAEKQAAEEAKADIGWGSQIRNYVLD-QSRIK 300

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           DLRT +E  +   VLDGDLD F++A+L 
Sbjct: 301 DLRTGVEIGNTQGVLDGDLDPFIEASLK 328


>gi|225549713|ref|ZP_03770678.1| peptide chain release factor 2 [Borrelia burgdorferi 118a]
 gi|225369673|gb|EEG99121.1| peptide chain release factor 2 [Borrelia burgdorferi 118a]
          Length = 348

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 150/347 (43%), Positives = 216/347 (62%), Gaps = 4/347 (1%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG FD +    ++     +    + W +   A+ +++ +  L N I   +E+ +++ 
Sbjct: 3   KTFGGSFDKNEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIK 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   L       ++             ++ + +     S    E D+N+A+L +H+GAGG
Sbjct: 63  DLSDL---CEIAENEKDTNGLEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGG 119

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+
Sbjct: 120 TEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGI 178

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRL+RISP+D+  +RHTSF+S++V PV+DD IEI I   D RIDTYRASGAGGQHVN T 
Sbjct: 179 HRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEITIKPEDIRIDTYRASGAGGQHVNKTS 238

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     + +K EI 
Sbjct: 239 SAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEIS 298

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L  K
Sbjct: 299 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 345


>gi|37520802|ref|NP_924179.1| peptide chain release factor 2 [Gloeobacter violaceus PCC 7421]
 gi|35211797|dbj|BAC89174.1| peptide chain release factor [Gloeobacter violaceus PCC 7421]
          Length = 354

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 146/342 (42%), Positives = 218/342 (63%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      R++ L  +   P  W +   A+  ++   +L   +      ++ L D  
Sbjct: 8   RTIFDVAQRQIRIAALEQQASAPDFWDDQAAAQKALQNLNNLKQPLEQFGRWRNLLSDAE 67

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           ++LEL  E  D S+L E   N++ +  E++  + E LLSG  D   A L ++AGAGGT++
Sbjct: 68  VVLELVQETGDESLLPEAEGNIEALVGELDRWELEQLLSGPYDERGAILSINAGAGGTDA 127

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRWAE++ ++   LE+ +GEEAG+KSATL I G  AYG+L  E+G HRL
Sbjct: 128 QDWAEMLLRMYTRWAERQGYQAHLLELSEGEEAGVKSATLEIDGRYAYGYLSAEKGTHRL 187

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+++N +R TSF+ + V PV+DDS++++I   D  IDT+R+ G GGQ+VN  ++ V
Sbjct: 188 VRISPFNANDKRQTSFAGVEVMPVLDDSVQVDIRPDDIEIDTFRSGGKGGQNVNKVETGV 247

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+TH PTG+ V+C QER+Q +N+ +A  ML+A+L  LE +KR++  +       +  WG 
Sbjct: 248 RVTHKPTGISVRCTQERAQLQNRNKAMEMLKARLLVLEEEKRQQHLSDIRGEAVDAAWGN 307

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYV  PYQMVKDLRT  E +  + V++G ++ F++  L 
Sbjct: 308 QIRSYVFHPYQMVKDLRTEEETSDVTGVMNGKIEPFIERYLR 349


>gi|224373403|ref|YP_002607775.1| peptide chain release factor 2 [Nautilia profundicola AmH]
 gi|254790918|sp|B9L5Y7|RF2_NAUPA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|223589806|gb|ACM93542.1| peptide chain release factor 2 [Nautilia profundicola AmH]
          Length = 367

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 168/354 (47%), Positives = 229/354 (64%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  ++  +  +   +    RL  +      P  W +   +  + +E+  +   +   K+
Sbjct: 12  ELENKIENIESILKPEKLEARLKEIEELENSPDFWNDPKTSAKVQKEKNAILRKLEKYKK 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            +  L DN  + ELA  E+D   L E  +++Q +K  +   + E +LS E D+ +A + +
Sbjct: 72  AKTALQDNKDMFELASMEEDEETLNEVFNDVQDLKKIIRDLEIEVMLSDENDAKNAIISI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTES DWA++L RMY R+AE+R +K E L+   G+EAGIK  + L+KG NAYG+L
Sbjct: 132 HPGAGGTESHDWASILYRMYLRYAERRGWKVEVLDYQAGDEAGIKDVSFLVKGENAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVR+SP+DS  RRHTSF+S+ V P +DD IEIEI   D RID +RASGAGGQ
Sbjct: 192 KAENGIHRLVRVSPFDSGGRRHTSFASVQVSPEIDDDIEIEIDPKDIRIDVFRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+VV CQ +RSQHKNK  A  ML++KLYELEL+KR+        
Sbjct: 252 HVNKTESAVRITHIPTGIVVGCQTDRSQHKNKDMAMKMLKSKLYELELEKRKAEEEG--K 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            K E+GWG QIRSYVL PYQ VKD R+N   +   D+LDGDLD+ ++  L  +K
Sbjct: 310 PKDEMGWGHQIRSYVLFPYQQVKDNRSNKAYSRVDDILDGDLDEVIEDVLIAEK 363


>gi|322516704|ref|ZP_08069613.1| peptide chain release factor RF2 [Streptococcus vestibularis ATCC
           49124]
 gi|322124737|gb|EFX96175.1| peptide chain release factor RF2 [Streptococcus vestibularis ATCC
           49124]
          Length = 337

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 150/336 (44%), Positives = 214/336 (63%), Gaps = 2/336 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L  +  +P  W + I A+   ++   L         +Q+   +    L L + 
Sbjct: 1   MEEDIALLENRMTEPDFWNDNIAAQKTSQDLNELKMKYETFNNMQELSDETE--LYLEML 58

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E+D SI +E  + L+++   +   +   LLS   D ++A LE+H G+GGTE+QDWA+MLL
Sbjct: 59  EEDDSIQEELEETLEKLDKIMTSYEMTLLLSEPYDHSNAILEIHPGSGGTEAQDWADMLL 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY R+   + FK E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS
Sbjct: 119 RMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSF+S+ V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG
Sbjct: 179 AKRRHTSFTSVEVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VV    +R+Q+ N+ +A  ML+AKLY++E +K+ E  N  +  K EI WG QIRSYV  
Sbjct: 239 IVVASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFT 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY MVKD RT  E      V+DGD++ F+ A L  +
Sbjct: 299 PYTMVKDHRTGYEVAQVDKVMDGDIEGFIDAYLKWR 334


>gi|302865524|ref|YP_003834161.1| peptide chain release factor 2 [Micromonospora aurantiaca ATCC
           27029]
 gi|315502072|ref|YP_004080959.1| peptide chain release factor 2 [Micromonospora sp. L5]
 gi|302568383|gb|ADL44585.1| peptide chain release factor 2 [Micromonospora aurantiaca ATCC
           27029]
 gi|315408691|gb|ADU06808.1| peptide chain release factor 2 [Micromonospora sp. L5]
          Length = 373

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 159/353 (45%), Positives = 224/353 (63%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D   ++ + L  +   P LW +  +A+ +  +  +++  I+ + ++
Sbjct: 13  LDATLRNIEAVLDLDKLREQKARLEQEASAPDLWDDQAKAQQVTSQLSYVNGEITKLGDL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +LLELA  EDD   L E    +  +   ++  +  +LLSGE DS +A + + 
Sbjct: 73  RSRLDDAGVLLELAQAEDDPGALTEVESEITGLTKAIQEMEVRTLLSGEYDSREALVAIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A MLLRMY RWAE+  + TE  E    EEAG+KSAT  +K P AYG L 
Sbjct: 133 AGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFTVKVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+ + V PV + +  I+I E++ R+D YR+SG GGQ 
Sbjct: 193 VESGTHRLVRISPFDNQGRRQTSFAGVEVLPVTEQTDHIDIPENEVRVDVYRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+A+L E + Q+ EE     ++ 
Sbjct: 253 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASAMRVLQARLLERKRQEEEEKLAGLKTG 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +   WG Q+RSYVL PYQMVKDLRT  E  +PS V DGDLD F++A +  +K
Sbjct: 313 -STSSWGDQMRSYVLHPYQMVKDLRTEQETGNPSSVFDGDLDSFIEAGIRWRK 364


>gi|159036572|ref|YP_001535825.1| peptide chain release factor 2 [Salinispora arenicola CNS-205]
 gi|189040003|sp|A8M3R1|RF2_SALAI RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|157915407|gb|ABV96834.1| peptide chain release factor 2 [Salinispora arenicola CNS-205]
          Length = 373

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 162/355 (45%), Positives = 222/355 (62%), Gaps = 5/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D      + L      P LW +   A+ +  +  +++  I+ + ++
Sbjct: 13  LDTTLRNIESVLDIDRLRADKARLEEAASAPDLWDDQARAQQVTSQLSYVNGEITKLTDL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +LLELA  E D  +L E +  +  +   ++  +  +LLSGE DS +A + + 
Sbjct: 73  RSRLDDTQVLLELAEAESDPGVLTEVAAEITGLAKSIDEMEVRTLLSGEYDSREALVAIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A MLLRMY RWAE+  + TE  E    EEAG+KSAT  +K P AYG L 
Sbjct: 133 AGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFTVKVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I E++ R D YR+SG GGQ 
Sbjct: 193 VESGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQTDHIDIPENEMRTDVYRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV CQ E+SQ +NKA A  +L+A+L E   +KR+E     +  
Sbjct: 253 VNTTDSAVRITHIPTGIVVTCQNEKSQLQNKASALRVLQARLLE---RKRQEEQAKLQGL 309

Query: 303 KTEI--GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           KT+    WG Q+RSYVL PYQMVKDLRT  E  SPS V DG+LD F++A +  +K
Sbjct: 310 KTDAAGSWGDQMRSYVLHPYQMVKDLRTEQETGSPSSVFDGELDAFIEAGIRWRK 364


>gi|325571387|ref|ZP_08146887.1| peptide chain release factor RF2 [Enterococcus casseliflavus ATCC
           12755]
 gi|325155863|gb|EGC68059.1| peptide chain release factor RF2 [Enterococcus casseliflavus ATCC
           12755]
          Length = 329

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 160/325 (49%), Positives = 215/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ ++              ++ + L +  ++LE+  EE D  +  E  
Sbjct: 1   MADPTFWDDSEKAQQVINANNANKETYDQFNQLAEELEELEVMLEMIQEEADPEMEAELD 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             + ++  ++   +   LL    D N+A +E+H GAGGTESQDW +MLLRMYTR+ E+  
Sbjct: 61  ARIGKLNEKMASYELSMLLDEPYDRNNAIIELHPGAGGTESQDWGSMLLRMYTRFCEQHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           ++ E L+   G+EAGIKS TLL+KG NAYG+LK E+GVHR VRISP+DS  RRHTSF S+
Sbjct: 121 YQVETLDYQAGDEAGIKSVTLLVKGHNAYGYLKSEKGVHRFVRISPFDSAKRRHTSFCSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D +I++EI+  D +IDTYRASGAGGQH+N T+SAVRITHIP G VV  Q +RSQ
Sbjct: 181 DVMPELDGAIDVEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPKGTVVASQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KN+ QA  ML+AKLY+LE++K+E+ A      + EIGWG QIRSYV  PY MVKD RTN
Sbjct: 241 LKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQLEIGWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L +K
Sbjct: 301 FETGNVQAVMDGDLDGFIDAYLKLK 325


>gi|260771797|ref|ZP_05880715.1| peptide chain release factor 2 [Vibrio metschnikovii CIP 69.14]
 gi|260613089|gb|EEX38290.1| peptide chain release factor 2 [Vibrio metschnikovii CIP 69.14]
          Length = 320

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 165/317 (52%), Positives = 221/317 (69%), Gaps = 1/317 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W     A+ L +ER  L   +  I +++  + D   LLELA+E  D     E    L+ +
Sbjct: 2   WNEPERAQALGKERSSLQAVVETINQLEQGVDDVEGLLELAIEAQDQETFDEVLPELEEL 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           + ++   +F  + SG+ D+   Y+++ AG+GGTE+QDW +MLLRMY RWA+ + FKTE +
Sbjct: 62  EAKLAQLEFRRMFSGDHDAAHCYIDLQAGSGGTEAQDWTSMLLRMYLRWADDKGFKTEVI 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E+ +G+ AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S +VYP +
Sbjct: 122 EVSEGDVAGLKSATVRIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFVYPEI 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           D++I ++I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK Q
Sbjct: 182 DENIAVDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQ 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A   LRAKL+ELELQK+       E +K++IGWG QIRSYVL     +KDLRT +E  + 
Sbjct: 242 AMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNT 300

Query: 336 SDVLDGDLDDFMKATLA 352
             VLDGDLD F++A+L 
Sbjct: 301 QAVLDGDLDKFIEASLK 317


>gi|218439666|ref|YP_002377995.1| peptide chain release factor 2 [Cyanothece sp. PCC 7424]
 gi|218172394|gb|ACK71127.1| peptide chain release factor 2 [Cyanothece sp. PCC 7424]
          Length = 360

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 152/344 (44%), Positives = 220/344 (63%), Gaps = 1/344 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      ++  L  +   P  W +   A+  ++E   L +++   ++ Q +L D  
Sbjct: 12  RTIFDLPALKAKIKDLEQRAAQPEFWDSPETAQSTLQELNELKSSLELYQQWQTQLEDAK 71

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            + EL   E+D S+LQE   NLQ++  E+E  + + LLSG  D+    L ++AGAGGT++
Sbjct: 72  AISELLELEEDTSLLQEAQTNLQQLNHELERWELQQLLSGPYDAKGVLLTINAGAGGTDA 131

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRW EKR +K   +E  +G+EAGIKSATL I+G  AYG+LKGE+G HRL
Sbjct: 132 QDWAAMLLRMYTRWGEKRGYKVHLVESSEGDEAGIKSATLEIEGRYAYGYLKGEKGTHRL 191

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSI-EIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           VRISP+++N +R TSF+ + + P +++    +EI E D  I T RA G GGQ+VN  ++A
Sbjct: 192 VRISPFNANGKRQTSFAGVEIMPNIEEEALNVEIPEKDLEITTSRAGGKGGQNVNKVETA 251

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+ H+PTG+ V+C +ERSQ +NK +A  +L+AKL  + +++R +          E  WG
Sbjct: 252 VRVVHLPTGIAVRCTEERSQLQNKEKALALLKAKLLVIAVEQRAQEIAEIRGDMVEAAWG 311

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIR+YV  PYQMVKDLRTN+E +    V+DGDLD F++A L  
Sbjct: 312 NQIRNYVFHPYQMVKDLRTNVETSDIGAVMDGDLDAFIEAYLRQ 355


>gi|56416847|ref|YP_153921.1| peptide chain release factor 2 [Anaplasma marginale str. St.
           Maries]
 gi|56388079|gb|AAV86666.1| peptide chain release factor 2 [Anaplasma marginale str. St.
           Maries]
          Length = 338

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 171/332 (51%), Positives = 226/332 (68%), Gaps = 2/332 (0%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             L+++     LW +   AK L+ ER  ++  ++  + ++    + + LL+LA E D   
Sbjct: 2   EELDSRCSSASLWDDQENAKKLLSERARVEEVLASFRALEKEYAECVELLDLADESDSEF 61

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
           +       L +++  V  K+ E + SGEAD +  +L +  GAGGTES DWA MLLRMY R
Sbjct: 62  LDG-LWSALTQLERRVSQKKAECMFSGEADGSGCFLVIRPGAGGTESNDWAAMLLRMYVR 120

Query: 144 WA-EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           WA     F TE ++  DGE AG+KS T+ I G  AYGW K E GVHRLVRISP+DS+SRR
Sbjct: 121 WAGTFHGFTTEIVDKIDGEAAGLKSVTVKISGNGAYGWAKTESGVHRLVRISPFDSSSRR 180

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSF+S+ V P+ DD I+IEI E D RIDTYRASGAGGQHVN T+SAVRITH+P+G+VVQ
Sbjct: 181 HTSFASVEVSPIADDKIDIEILEKDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVVQ 240

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
           CQ  RSQH+N+A+A+++LR++LYE+ELQ++E+       S+ +IGWG QIRSYV+ PY+M
Sbjct: 241 CQTSRSQHQNRAEAYSLLRSRLYEMELQEKEKKMAQEHDSRCDIGWGHQIRSYVMHPYRM 300

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           VKDLRT  E      VLDGDLD F+ A L  K
Sbjct: 301 VKDLRTGHETGDVDAVLDGDLDKFIAAALTYK 332


>gi|317057134|ref|YP_004105601.1| peptide chain release factor 2 [Ruminococcus albus 7]
 gi|315449403|gb|ADU22967.1| peptide chain release factor 2 [Ruminococcus albus 7]
          Length = 378

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 151/350 (43%), Positives = 230/350 (65%), Gaps = 3/350 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  L  ++D +NA +++  L+ K  +P  W +  ++++++++ ++L+  +    +     
Sbjct: 20  IRELHDVYDIENAAEKIEELHEKAAEPGFWDDPEKSQVVLQQTRNLEGKVERYNKFNGAA 79

Query: 67  CDNLILLELALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            D  +++E+A EED+ +  +   +    L ++K +++    E+LL+GE D ++A L  HA
Sbjct: 80  DDIEVMIEMAAEEDEDTQAELVEEIKAELDKLKADLDAASLETLLTGEYDHSNAILNFHA 139

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDW  ML+RMYT+WA+   F  + ++I +G +AGIKS ++ I+G NAYG+LK 
Sbjct: 140 GAGGTEAQDWTEMLIRMYTKWADSHGFSAKIMDILEGGDAGIKSCSMFIEGENAYGYLKS 199

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G+HRLVRISP+DS+  RHTSFS++ V P +DD+IE+EI   D  ++ YRASGAGGQH+
Sbjct: 200 ESGIHRLVRISPFDSSGSRHTSFSAVEVMPELDDTIEVEIRPEDIEMEVYRASGAGGQHI 259

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVR+ H PTG+V  CQ +RSQ +NK  A  ML+AKL E++ ++  E     +  +
Sbjct: 260 NKTSSAVRLIHKPTGIVTACQTQRSQFQNKDYAMKMLKAKLIEIKEREHLEKIEDIKGVQ 319

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            EI WG QIRSYV  PY +VKDLRT  E  +   V+DGDLD F+ A L  
Sbjct: 320 KEIAWGSQIRSYVFMPYTLVKDLRTGFEYNNVKAVMDGDLDGFINAYLKA 369


>gi|33866841|ref|NP_898400.1| peptide chain release factor 2 [Synechococcus sp. WH 8102]
 gi|81573750|sp|Q7U3W6|RF2_SYNPX RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|33639442|emb|CAE08826.1| peptide chain release factor RF-2 [Synechococcus sp. WH 8102]
          Length = 374

 Score =  254 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 147/352 (41%), Positives = 207/352 (58%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ +L       D      R   L      P  W +   A+  MR    +   +  + +
Sbjct: 12  ELTDRLGHAQDCLDVPALKARQQDLEQLAAQPDFWDDQQAAQKQMRRLDEVKAQLQQLAD 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
               + D    LEL   E D  +L E  + L +++  ++  + E LLSG+ D   A L +
Sbjct: 72  WGGAVDDAKATLELYELEPDEEMLTEAQEGLNQLRQGLDRWELERLLSGDYDKEGAVLTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGT++QDWA MLLRMYTRWAE    K    E+ +GEEAGIKS T+ ++G  AYG+L
Sbjct: 132 NAGAGGTDAQDWAQMLLRMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEVEGRYAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E+G HRLVRISP+++N +R TSF+ I V P +D+ ++I+I E D  + T R+ GAGGQ
Sbjct: 192 RNEKGTHRLVRISPFNANDKRQTSFAGIEVMPKIDEEVDIDIPEKDLEVTTSRSGGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++AVRI HIPTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R         
Sbjct: 252 NVNKVETAVRILHIPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
              E  WG QIR+YV  PYQMVKDLRT+ E      V+DG LD F+ A+L  
Sbjct: 312 DIVEAAWGNQIRNYVFHPYQMVKDLRTSEETNDVQAVMDGALDPFIDASLRQ 363


>gi|239917286|ref|YP_002956844.1| bacterial peptide chain release factor 2 (bRF-2) [Micrococcus
           luteus NCTC 2665]
 gi|239838493|gb|ACS30290.1| bacterial peptide chain release factor 2 (bRF-2) [Micrococcus
           luteus NCTC 2665]
          Length = 373

 Score =  254 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 145/352 (41%), Positives = 215/352 (61%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D     ++ L  +   P LW +  EA+ +  +  H    +  I  +
Sbjct: 13  LRHTLASIEQVSDLDRIKADIAELEQQASAPDLWDDPEEAQKVTSKLSHRQTDLKRITSL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D   ++ELA EED+ S+L + +  L  I+  +E  +  +LLSGE D  DA + + 
Sbjct: 73  ESRIEDLETMVELAAEEDEPSLLDDANQELTSIRKALEELEVVTLLSGEYDQRDAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A  L+RMY RWAE+R + T+ ++    EEAG+KS T  +  P A+G L 
Sbjct: 133 AGAGGVDAADFAETLMRMYLRWAEQRGWSTKVMDTSYAEEAGLKSVTFEVNAPFAFGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++    IEI ES+ ++D +R+SG GGQ 
Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIESDDSIEIPESEIKVDVFRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV  Q E+SQ +N+A A  +L+++L  L   + +         
Sbjct: 253 VNTTDSAVRMTHLPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLLRKAEEDAKKKEMAGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  WG Q+RSYVL PYQMVKDLRT  E+ +PS V DG +DDF+ A +  +
Sbjct: 313 -VKASWGDQMRSYVLNPYQMVKDLRTGHEEGNPSSVFDGHIDDFVDAGIRWR 363


>gi|315445399|ref|YP_004078278.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp.
           Spyr1]
 gi|315263702|gb|ADU00444.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp.
           Spyr1]
          Length = 372

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 161/357 (45%), Positives = 221/357 (61%), Gaps = 8/357 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R+  L +   DP LW +   A+ +  +  H  N +  ++E+
Sbjct: 12  LDTTLTTVERVVDVDGLRGRIQQLESDASDPKLWDDQARAQKVTSDLSHAQNELRRVEEL 71

Query: 63  QDRLCDNLILLELALEED---DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + RL D  +L ELA EE+         E    L +++ ++   +  +LLSGE D  +A +
Sbjct: 72  RSRLDDLPVLYELAAEEEGAGSSEAFAEADAELAKLREDIAGMEVRTLLSGEYDEREALV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+  +  E  +    EEAGIKSAT  +  P AYG
Sbjct: 132 NIRSGAGGVDAADWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG G
Sbjct: 192 NLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL E   +KR E     
Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLE---RKRLEERAEM 308

Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           ++ K + G  WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +  +
Sbjct: 309 DALKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWR 365


>gi|300857995|ref|YP_003782978.1| peptide chain release factor RF-2 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300685449|gb|ADK28371.1| peptide chain release factor RF-2 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302205723|gb|ADL10065.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
           pseudotuberculosis C231]
 gi|302330275|gb|ADL20469.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
           pseudotuberculosis 1002]
 gi|308275958|gb|ADO25857.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
           pseudotuberculosis I19]
          Length = 366

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 156/353 (44%), Positives = 217/353 (61%), Gaps = 3/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +    R+  L  +  DP LW N   A+ +  E   +   +  +  
Sbjct: 11  ELDATLTTIEKVMDPEELASRVRELEQQASDPTLWDNPDHAQKVTTELSSVQAQLKKLTS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ R+ D  ++ ELA EE D + L +        ++E    + +++LSGE D+ +A + +
Sbjct: 71  LRQRIDDMPVMYELAEEEGDDTELADEELAELTSEIESL--EVKTMLSGEYDAREAVINI 128

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMY RWAEK   K +  +I   EEAGIKSAT ++ G   YG L
Sbjct: 129 RSGAGGVDAADWAEMLMRMYVRWAEKNDRKVDIYDISYAEEAGIKSATFVVHGEYMYGQL 188

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ I V PVV+ +  I+I +S+ R+D YR+SG GGQ
Sbjct: 189 SVEQGAHRLVRISPFDNQGRRQTSFAEIEVLPVVEQTDHIDIPDSEVRVDVYRSSGPGGQ 248

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E + Q+     +   +
Sbjct: 249 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKRQEERAELDALGA 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                 WG Q+RSYVL PYQMVKDLRTN E   P  VLDGDLD F++A +  +
Sbjct: 309 G-GNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPQKVLDGDLDGFLEAGIRWR 360


>gi|147834602|emb|CAN69654.1| hypothetical protein VITISV_010541 [Vitis vinifera]
          Length = 426

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 159/352 (45%), Positives = 231/352 (65%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++  ++ +     W   V RL  L+ +   P LW N + A  + RE   L   +  +K +
Sbjct: 64  IALSIHLIKKRLQWKKLVVRLDVLSAQLNKPDLWDNPVHAGKISREHGMLMGKMKGVKNL 123

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L +++ +++LA EE+D  +  E+   L  ++   + K+ E+LL+G+ DS   Y+EV 
Sbjct: 124 EQELLEHIDMVKLAREENDPELESESLKALLGMRRNSKEKELEALLAGDHDSCSCYIEVQ 183

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA M+++MY  WA++R +    ++   GE AGIK AT+ + G  ++G+ K
Sbjct: 184 AGAGGTESMDWAAMVMQMYKMWAQRRGYGVTVVDEMPGETAGIKRATIKVDGEYSFGYAK 243

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+DS  RRHTSF+++ V P+  D S  ++I+ESD RI+ +RA GAGGQ
Sbjct: 244 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDASSHVQINESDLRIERFRAGGAGGQ 303

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTT+SAVRI HIPTGV   CQ ERSQH+NKA A  +L+++L +LE+ ++ +I      
Sbjct: 304 HVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQLEISRQAQINAQHTQ 363

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           S T+I WG QIR+YVL PY+MVKDLRTN E + P  VL+GDLD F+ + L+ 
Sbjct: 364 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSA 415


>gi|225549349|ref|ZP_03770322.1| peptide chain release factor 2 [Borrelia burgdorferi 94a]
 gi|225370207|gb|EEG99647.1| peptide chain release factor 2 [Borrelia burgdorferi 94a]
          Length = 348

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 150/347 (43%), Positives = 216/347 (62%), Gaps = 4/347 (1%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG FD +    ++     +    + W +   A+ +++ +  L N I   +E+ +++ 
Sbjct: 3   KTFGGSFDKNEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIK 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   L       ++             ++ + +     S    E D+N+A+L +H+GAGG
Sbjct: 63  DLSDL---CEIAENEKDTNGLEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGG 119

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+
Sbjct: 120 TEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGI 178

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRL+RISP+D+  +RHTSF+S++V PV+DD IEI I   D RIDTYRASGAGGQHVN T 
Sbjct: 179 HRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTS 238

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     + +K EI 
Sbjct: 239 SAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEIS 298

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L  K
Sbjct: 299 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 345


>gi|194476812|ref|YP_002048991.1| peptide chain release factor 2 [Paulinella chromatophora]
 gi|171191819|gb|ACB42781.1| peptide chain release factor 2 [Paulinella chromatophora]
          Length = 354

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 149/343 (43%), Positives = 208/343 (60%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      R   L      P  W    +A+  MR+   +   +  +++ Q  + D  
Sbjct: 3   RTVFDVPALKARQQDLEQLASQPKFWDLQDQAQKQMRQLDEVREQLEKLRQWQGTIADAK 62

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             LEL   E D S+L E ++ +QR+K  ++  + E LL+G  D   A + ++AGAGGT++
Sbjct: 63  ATLELYNIEPDESMLNEGNEGMQRLKNNLDRWELERLLNGTYDKGGAVISINAGAGGTDA 122

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRW+E    K    EI +GEEAGIKS T  I G  AYG+L+ E+G HRL
Sbjct: 123 QDWARMLLRMYTRWSEDHGMKVNICEISEGEEAGIKSVTFEIDGSYAYGYLRNEKGTHRL 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+++N +R TSF+ + V P +++ I++ I + D  + T R+ GAGGQ+VN  ++AV
Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKLNEDIDMFIPDKDLEVTTSRSGGAGGQNVNKVETAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI HIPTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R            E  WG 
Sbjct: 243 RILHIPTGLAVRCTQERSQLQNKEKAMALLKAKLMVIAQEQRAAEIADIRGEIVEAAWGN 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QIR+YV  PYQMVKDLRTN E T    V+DGDLD F++A L  
Sbjct: 303 QIRNYVFHPYQMVKDLRTNKETTDVQGVMDGDLDLFIQALLRQ 345


>gi|325963891|ref|YP_004241797.1| bacterial peptide chain release factor 2 (bRF-2) [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323469978|gb|ADX73663.1| bacterial peptide chain release factor 2 (bRF-2) [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 371

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 141/352 (40%), Positives = 217/352 (61%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L      +  + D +   + ++ L+ +  +P LW +   A+ +     H  + +  +  +
Sbjct: 13  LRATYESIERVSDVEALKEDIAELSERAGEPDLWDDPSAAQKITSRLSHRQSELERLNNL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             R+ D  +L+EL  +EDD + + E +  L+ IK  ++  +  +LLSGE D  +A + + 
Sbjct: 73  ASRIDDLEVLVELGQDEDDAASMGEAAAELESIKKALKELEVVTLLSGEYDEREAVVSIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A ML+RMY RWAE+  + T  ++    EEAG+KSAT  +K P AYG L 
Sbjct: 133 AGAGGVDAADFAEMLMRMYLRWAERHGYPTTVMDTSYAEEAGLKSATFEVKAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI +++ R+D +R+SG GGQ 
Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDSIEIPDNEIRVDVFRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG VV  Q E+SQ +N+A A  +L+++L  L+ ++ +         
Sbjct: 253 VNTTDSAVRLTHIPTGTVVSMQNEKSQLQNRAAAMRVLQSRLLLLKKEQEDAEKKALAGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  WG Q+RSYVL PYQMVKDLRT  E  + S V DG++DDF+ A +  +
Sbjct: 313 -VKASWGDQMRSYVLNPYQMVKDLRTEHEVGNTSAVFDGEIDDFIDAGIRWR 363


>gi|83593375|ref|YP_427127.1| peptide chain release factor 2 [Rhodospirillum rubrum ATCC 11170]
 gi|83576289|gb|ABC22840.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodospirillum
           rubrum ATCC 11170]
          Length = 322

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 204/309 (66%), Positives = 238/309 (77%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRER HL+ +++  + ++  + D   L+EL   EDD   + E    L     +   ++ E
Sbjct: 1   MRERTHLEQSVAGYRALEREVDDAATLIELGDAEDDAESIAEGERMLHSAAQKARKQELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD NDAYLEVHAGAGGTE+QDWA +LLRMYTRWAE    K E LE   GEEAGI
Sbjct: 61  SLLSGEADHNDAYLEVHAGAGGTEAQDWALILLRMYTRWAEAHGHKVEFLEESAGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISP+DS++RRHTSFSSIWVYPVVDD+IEI+I E
Sbjct: 121 KSATIKIVGHNAYGWLKTESGVHRLVRISPFDSSARRHTSFSSIWVYPVVDDTIEIDIEE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            DCRIDTYRASGAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQH+NK   W+MLRA+LY
Sbjct: 181 KDCRIDTYRASGAGGQHVNRTESAVRITHIPTGIVVQCQSERSQHQNKDYCWSMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E ELQKREE     E +KT+IGWG QIRSYVLQPYQM+KD RTN+E +    VL+GDLD 
Sbjct: 241 EHELQKREEKTKALEDTKTDIGWGHQIRSYVLQPYQMIKDTRTNVETSDTQGVLNGDLDQ 300

Query: 346 FMKATLAIK 354
           FM A+LA +
Sbjct: 301 FMAASLAAR 309


>gi|289706413|ref|ZP_06502771.1| peptide chain release factor 2 [Micrococcus luteus SK58]
 gi|289556908|gb|EFD50241.1| peptide chain release factor 2 [Micrococcus luteus SK58]
          Length = 373

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 145/352 (41%), Positives = 216/352 (61%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D     ++ L  +   P LW +  EA+ +  +  H    +  I  +
Sbjct: 13  LRHTLASIEQVSDLDRIKADIAELEQQASAPDLWDDPEEAQKVTSKLSHRQTDLKRITSL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D   ++ELA EED+ S+L++ +  L  I+  +E  +  +LLSGE D  DA + + 
Sbjct: 73  ESRIEDLETMVELAAEEDEPSLLEDANQELTSIRKALEELEVVTLLSGEYDQRDAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A  L+RMY RWAE+R + T+ ++    EEAG+KS T  +  P A+G L 
Sbjct: 133 AGAGGVDAADFAETLMRMYLRWAEQRGWSTKVMDTSYAEEAGLKSVTFEVNAPFAFGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++    IEI ES+ ++D +R+SG GGQ 
Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIESDDSIEIPESEIKVDVFRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV  Q E+SQ +N+A A  +L+++L  L   + +         
Sbjct: 253 VNTTDSAVRMTHLPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLLRKAEEDAKKKEMAGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  WG Q+RSYVL PYQMVKDLRT  E+ +PS V DG +DDF+ A +  +
Sbjct: 313 -VKASWGDQMRSYVLNPYQMVKDLRTGHEEGNPSSVFDGHIDDFVDAGIRWR 363


>gi|221217380|ref|ZP_03588851.1| peptide chain release factor 2 [Borrelia burgdorferi 72a]
 gi|221192658|gb|EEE18874.1| peptide chain release factor 2 [Borrelia burgdorferi 72a]
          Length = 348

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 151/347 (43%), Positives = 218/347 (62%), Gaps = 4/347 (1%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG FD +    ++     +    + W +   A+ +++ +  L N I   +E+ +++ 
Sbjct: 3   KTFGGSFDKNEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIK 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   L E+    ++             ++ + +     S    E D+N+A+L +H+GAGG
Sbjct: 63  DLSDLFEI---AENEKDTNGLEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGG 119

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+
Sbjct: 120 TEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGI 178

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRL+RISP+D+  +RHTSF+S++V PV+DD IEI I   D RIDTYRASGAGGQHVN T 
Sbjct: 179 HRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTS 238

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     + +K EI 
Sbjct: 239 SAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEIS 298

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L  K
Sbjct: 299 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 345


>gi|210620542|ref|ZP_03292090.1| hypothetical protein CLOHIR_00033 [Clostridium hiranonis DSM 13275]
 gi|210155256|gb|EEA86262.1| hypothetical protein CLOHIR_00033 [Clostridium hiranonis DSM 13275]
          Length = 349

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 164/344 (47%), Positives = 235/344 (68%), Gaps = 1/344 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           LFD +   +++       E    W++   A  +++E + L   +   +++Q  L D  +L
Sbjct: 3   LFDIERLKEKIIENEQDMERQDFWEDNENAHKVLQENKKLCETVEKFEQLQKNLEDIEVL 62

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +EL LEEDD   +++   +      +V  +   ++LLSGE D N+A + ++AG GG ++Q
Sbjct: 63  IELGLEEDDSEDIEKEVSDSINQLKDVIDEMTIQTLLSGEYDKNNAIVSINAGTGGLDAQ 122

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA MLLRMY RWAE R +K + L++    EAGIK+A +LI+G NAYG+LKGE+GVHR+V
Sbjct: 123 DWAQMLLRMYIRWAEGRDYKVKLLDLISDPEAGIKTAVMLIQGDNAYGYLKGEKGVHRIV 182

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+D + +RHTSF+S+ V P +D++IE+EI++SD +IDTYRASGAGGQHVNTTDSAVR
Sbjct: 183 RISPFDPSGKRHTSFASVDVIPELDENIEVEINQSDLKIDTYRASGAGGQHVNTTDSAVR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+PTG+ VQCQ ERSQH N+  A  ML AKL +++  +++E     +   T+I WG Q
Sbjct: 243 ITHLPTGITVQCQNERSQHLNREVAMRMLMAKLIDIKEMEQKEKIEDLQGKYTQITWGSQ 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IRSYV QPY+MVKD RTN E  +   V++G++D F+ + L  KK
Sbjct: 303 IRSYVFQPYKMVKDHRTNTETGNVDAVMNGNIDIFINSYLTRKK 346


>gi|320161067|ref|YP_004174291.1| peptide chain release factor 2 [Anaerolinea thermophila UNI-1]
 gi|319994920|dbj|BAJ63691.1| peptide chain release factor 2 [Anaerolinea thermophila UNI-1]
          Length = 351

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 154/346 (44%), Positives = 217/346 (62%), Gaps = 5/346 (1%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD  +    L  L  + E+P +W +   A+ LM+    L   I    +   R  D L
Sbjct: 4   RSIFDLSSREMLLEQLQKEAENPGIWDDPTSAQRLMKRIADLREEIEGWNQFLKRCQDGL 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L     E +D S+ ++    +  ++ E++ ++  +LLSG  D  +A L ++AGAGGT+S
Sbjct: 64  EL----AESEDESLREDLEKEISALEKELQQRELTTLLSGPYDHENALLTINAGAGGTDS 119

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA+ML+RMY RW E+R F +E L+  +GEEAGIKS T+ + GP AYG+L+GE+GVHRL
Sbjct: 120 QDWASMLMRMYLRWCERRGFDSEILDFSEGEEAGIKSVTIAVTGPYAYGYLRGEKGVHRL 179

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEI-EISESDCRIDTYRASGAGGQHVNTTDSA 249
           VR+SP+D+  RRHTSF+ + V P + +     +I+  D RID YR+S AGGQ+V    +A
Sbjct: 180 VRLSPFDAAHRRHTSFAQVEVLPEISNGDNEIQINPDDLRIDIYRSSSAGGQNVQKNATA 239

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG+VV CQ ERSQ +N+  A  +LRA+L EL+ Q++E           +  WG
Sbjct: 240 VRITHIPTGIVVSCQNERSQMQNRENAMRVLRARLAELKRQEQERQLAELRGEYIKAEWG 299

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            QIRSYVL PYQ+VKD RT  E  +   VLDG+LD F++A L  +K
Sbjct: 300 SQIRSYVLHPYQLVKDHRTEYETGNTQAVLDGELDGFIEAYLRSQK 345


>gi|256828464|ref|YP_003157192.1| bacterial peptide chain release factor 2 (bRF- 2) [Desulfomicrobium
           baculatum DSM 4028]
 gi|256577640|gb|ACU88776.1| bacterial peptide chain release factor 2 (bRF- 2) [Desulfomicrobium
           baculatum DSM 4028]
          Length = 369

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 162/350 (46%), Positives = 222/350 (63%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +        D     +RL+ +  +   P  W        +++E+  L++ +   + 
Sbjct: 13  QLDERFTDFWRRLDLRRNKERLNEIEKQISSPGAWDKPELLTPVLQEKTQLESRVDEWEA 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +     + L  +E+A  E    +LQ   + L+ +  ++E  Q  +LLS   D ++A LE+
Sbjct: 73  LLQARDNALEWVEMASTEQTQEMLQALEEALEEMSAKLEAAQMRTLLSDPEDVSEAILEI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA MLLRMY R+AE+  FK E L++  G+EAGIKS TL I GP AYG L
Sbjct: 133 HPGAGGTESQDWAEMLLRMYRRFAERVGFKVELLDLLPGDEAGIKSVTLHIHGPYAYGQL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE+G HRL+RISP+DS+ RRHTSF+S+ VYP     IEIEI + D R+D +R+SG GGQ
Sbjct: 193 KGEKGTHRLIRISPFDSSGRRHTSFASVDVYPDAGQDIEIEIRDEDVRVDIFRSSGPGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+V QCQ E+SQHKNK  A  +L+A+LYELELQK          
Sbjct: 253 SVNTTDSAVRVTHIPTGLVAQCQNEKSQHKNKEAAMKVLKARLYELELQKIASERQAEYV 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +K  I +G QIR+Y LQPY++VKD RT  + ++   VLDG++D F+   L
Sbjct: 313 AKGAIAFGSQIRTYTLQPYRLVKDHRTGTDTSNVDSVLDGNIDAFIHNYL 362


>gi|256824891|ref|YP_003148851.1| peptide chain release factor 2 [Kytococcus sedentarius DSM 20547]
 gi|256688284|gb|ACV06086.1| bacterial peptide chain release factor 2 (bRF-2) [Kytococcus
           sedentarius DSM 20547]
          Length = 370

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 142/354 (40%), Positives = 211/354 (59%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   +  +  + D     ++L+ L  ++  P LW +    + +      +   +  I+ 
Sbjct: 11  ELRTTMESVREVIDLPRLKEQLADLEQQSSAPDLWDDPENGQKVSAAMSRVRGEVERIES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  R+ D  +L+E+  EE D   L E +  L  I+  VE  +  +LLSGE D  +A + +
Sbjct: 71  MDSRIDDLEVLVEMGTEEGDAETLAEATKELAAIQAAVEKLEVRTLLSGEYDEREAVITI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG ++ D+A ML+RMY RWAE+ ++ T+ L+    EEAG+KS T  +  P AYG L
Sbjct: 131 RAGAGGVDAADFAEMLMRMYLRWAERHEYPTKVLDTSYAEEAGLKSVTFEVNVPYAYGNL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISPYD+  RR TSF+++ V PV++ +  IEI E++ ++D +R+SG GGQ
Sbjct: 191 VVEGGTHRLVRISPYDNQGRRQTSFAAVEVVPVIEQTDSIEIPENEIKVDVFRSSGPGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L      +          
Sbjct: 251 SVNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLQRKAEEAAERKELAG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +  WG Q+RSYVL PYQMVKDLRT  E  +   V DGD+D F++A +  K+
Sbjct: 311 D-IKASWGDQMRSYVLHPYQMVKDLRTEHEVGNTQSVFDGDIDGFIEAGIRWKR 363


>gi|313672869|ref|YP_004050980.1| bacterial peptide chain release factor 2 (brf-2) [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939625|gb|ADR18817.1| bacterial peptide chain release factor 2 (bRF-2) [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 371

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 184/349 (52%), Positives = 248/349 (71%), Gaps = 3/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +      + + ++  ++LS +  +T DP  W    E+K L++E+  +   +     +
Sbjct: 13  LKEKFKRFKNIVNEEHLKEKLSNIEKQTHDPDFWS-SKESKHLLKEQSSIKKFLDDWYYL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             R  D  +LLEL  E ++ +      +N   +K  V   + + +L+GE D N+A L +H
Sbjct: 72  VRRFEDMDVLLELQEEGENVAAE--IEENFTELKQIVNDFELKLILNGENDINNAILTIH 129

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTE+ DWANMLLRMY RWAE RKFK E L+   G+EAGIKSATL I GP AYG+LK
Sbjct: 130 SGAGGTEANDWANMLLRMYIRWAENRKFKYEMLDYQAGDEAGIKSATLNIIGPYAYGYLK 189

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SP+D+N++RHTSF+S++V P ++D ++I I+ESD +IDT+RA GAGGQH
Sbjct: 190 GETGVHRLVRLSPFDANNKRHTSFASVFVLPEIEDDVDIVINESDLKIDTFRAGGAGGQH 249

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ ERSQHKNKA A  +L++KLYELE++K+ +  N  ESS
Sbjct: 250 VNTTDSAVRITHLPTGIVVSCQNERSQHKNKAHALKILKSKLYELEMEKKNKEKNELESS 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           KTEI +G QIRSYVL PY+MVKDLRT  E  +P  VLDG+LDDF+++ L
Sbjct: 310 KTEINFGSQIRSYVLHPYKMVKDLRTRHETGNPDAVLDGELDDFIRSYL 358


>gi|260438124|ref|ZP_05791940.1| peptide chain release factor 2 [Butyrivibrio crossotus DSM 2876]
 gi|292809448|gb|EFF68653.1| peptide chain release factor 2 [Butyrivibrio crossotus DSM 2876]
          Length = 372

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 167/350 (47%), Positives = 230/350 (65%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
              L  L    D DN  +++  L    ED   W +   ++  ++E + L +A +   E++
Sbjct: 15  DEPLKELRSALDLDNKAKKIEELEMHMEDQGFWNDPETSQKKLKELKALKDAFTNYNELE 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
               D    +E+A EE+D SI+ +  + +   K   E  +  +LLS E D+ +A L+++A
Sbjct: 75  KLRDDARTFMEIADEENDTSIIPDIEELVNEFKNLFEKVRISTLLSEEYDNCNAILKLNA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTES DWA+MLLRMYTRWAE + +  E L+  DG+EAG+KS T+ I G NAYG+LK 
Sbjct: 135 GAGGTESCDWASMLLRMYTRWAESKGYTVETLDYLDGDEAGVKSVTIQINGENAYGYLKS 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E+GVHRLVRISP+++N +R TSF S  V P +++ ++++I+E D RIDTYR+SGAGGQH+
Sbjct: 195 ERGVHRLVRISPFNANGKRQTSFVSCDVMPDIEEDLDVDINEDDLRIDTYRSSGAGGQHI 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SA+RITHIPTG+VVQCQ ERSQH+NK +A  ML+AKLY L+ Q+  E         
Sbjct: 255 NKTSSAIRITHIPTGIVVQCQNERSQHQNKDKAMQMLKAKLYLLKQQENAEKEAGIRGEV 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            EIGWG QIRSY+LQPY +VKD RTN E  +   VLDG++D F+   L  
Sbjct: 315 KEIGWGNQIRSYILQPYTLVKDHRTNAESGNAQAVLDGNIDLFLGEYLKW 364


>gi|325694230|gb|EGD36146.1| peptide chain release factor RF2 [Streptococcus sanguinis SK150]
          Length = 325

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 147/325 (45%), Positives = 204/325 (62%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   ++   L        ++ +   ++ ILL+   E++      E  
Sbjct: 1   MTEPDFWDDNIAAQKTSQDLNELKQTYENFHQMTELFDESEILLDFLAEDESVQGELEEK 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
                    +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 61  LAELEK--MMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q
Sbjct: 179 EVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+    +  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKQVAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGDLD F+ A L  +
Sbjct: 299 YEVAQVDKVMDGDLDGFIDAYLKWR 323


>gi|320540119|ref|ZP_08039774.1| peptide chain release factor RF-2 [Serratia symbiotica str. Tucson]
 gi|320029785|gb|EFW11809.1| peptide chain release factor RF-2 [Serratia symbiotica str. Tucson]
          Length = 325

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 174/324 (53%), Positives = 228/324 (70%), Gaps = 1/324 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P +W     A+ L +ER  L+  ++ I ++     D   LLELA+E +D     E  
Sbjct: 1   MEQPDVWNEPERAQALGKERAALEAIVATIDQLAQGGEDVNGLLELAVEAEDEETFNEAV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L ++ +++E  +F  + SGE DS D YL++ AG+GGTE+QDWA+MLLRMY RWAE + 
Sbjct: 61  IELDQLMVKLERLEFCRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLLRMYLRWAEAKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FKTE +E  DG+ A +KSAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS+
Sbjct: 121 FKTEVIEESDGDVARLKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           ++YP VDD I++EI+ +D RID YRASGAGGQHVN T+SAVRITH+PT +VVQCQ +RSQ
Sbjct: 181 FIYPEVDDDIDMEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           HKNK QA+  LRAKLY+ E+QK+       E +K++IGWG QIRSYVL     +KDLRTN
Sbjct: 241 HKNKDQAFKQLRAKLYDFEMQKKNADKQTMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTN 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
           +E  +   VLDGDLD F++A+L  
Sbjct: 300 VETRNTQAVLDGDLDKFIEASLKA 323


>gi|255037742|ref|YP_003088363.1| peptide chain release factor 2 [Dyadobacter fermentans DSM 18053]
 gi|254950498|gb|ACT95198.1| bacterial peptide chain release factor 2 (bRF- 2) [Dyadobacter
           fermentans DSM 18053]
          Length = 357

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 153/350 (43%), Positives = 222/350 (63%), Gaps = 3/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  LG   D+ N  Q+L  L  +T  P  W +   A+ +M+E + L    +  +E+
Sbjct: 9   LKARVEALGRYLDYANRKQQLGQLEQQTVQPEFWTDSARAEKVMKEIRGLKFWTNGYEEL 68

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
                D   + E    ++      +        KL  +  +F  ++  E D   A +E++
Sbjct: 69  ARLRDDLDTIWEFYEADEATEEEVDEEGKKLADKL--DEIEFRKMMGEEGDELPAVIEIN 126

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTESQDWA+ML+RMY  WAEK  +K   +++ DG+ AG+KS TL I G  AYG LK
Sbjct: 127 AGAGGTESQDWASMLMRMYIMWAEKNGYKVRQVDLQDGDVAGVKSVTLEIDGEYAYGNLK 186

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DSN+RRHTSF+S++VYP+ DD+IEIE++ +D   DTYR+ GAGGQ+
Sbjct: 187 SENGVHRLVRISPFDSNARRHTSFTSVYVYPLADDNIEIEVNMADITWDTYRSGGAGGQN 246

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++AVR+ H P+G+++ CQQERSQ  NK  A  +L+++LY++EL+KR       E+S
Sbjct: 247 VNKVETAVRLHHKPSGIIIACQQERSQLMNKEVAIRLLKSRLYQIELEKRNSARAEVEAS 306

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K +I WG QIRSYVL   + VKD RT+ + ++   VL+GD++ F+KA L 
Sbjct: 307 KRKIEWGSQIRSYVLDD-RRVKDHRTDYQTSNTEAVLNGDINAFIKAYLM 355


>gi|315226283|ref|ZP_07868071.1| peptide chain release factor RF2 [Parascardovia denticolens DSM
           10105]
 gi|315120415|gb|EFT83547.1| peptide chain release factor RF2 [Parascardovia denticolens DSM
           10105]
          Length = 396

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 140/353 (39%), Positives = 208/353 (58%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   +   +      D+   +++ L  +   P LW +   A+ +             + E
Sbjct: 31  EARSKYETITQAVGLDSLRGKIAELEKQASAPGLWDDPETAQRVTSNLSASQAEYKRLTE 90

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              RL D   L  L +EE+D    QE    L+++  ++   + ++LL GE D+  A + +
Sbjct: 91  AGQRLDDIDTLYSLGMEEEDEDSKQEAWSELKKLSKDLSDIEIQTLLDGEYDNRAAVVTI 150

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMY RWAE+ ++K + ++    EEAGIKSAT  +  P AYG L
Sbjct: 151 RSGAGGVDAADWAQMLMRMYIRWAERHQYKVQVIDTSYAEEAGIKSATFRVDAPYAYGKL 210

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+NSRR TSF+++ V P+V+ +  I++ +SD R+DTY + G GGQ
Sbjct: 211 SVEGGTHRLVRISPFDNNSRRQTSFAAVEVIPLVEPTDHIDVPDSDVRVDTYMSHGPGGQ 270

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVR+TH+PTG+VV  Q ERSQ +N+A A  +L+++L  L+ ++          
Sbjct: 271 GVNTTYSAVRLTHLPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLKQEEEAAKKKELAG 330

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT  E + P  V DGD+D F+ A +  +
Sbjct: 331 D-IKASWGDQMRSYVLHPYQMVKDLRTGYETSDPQAVFDGDIDGFIDAGIRWR 382


>gi|157363562|ref|YP_001470329.1| peptide chain release factor 2 [Thermotoga lettingae TMO]
 gi|166977374|sp|A8F531|RF2_THELT RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|157314166|gb|ABV33265.1| peptide chain release factor 2 [Thermotoga lettingae TMO]
          Length = 367

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 173/350 (49%), Positives = 233/350 (66%), Gaps = 2/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +      L D D     L  + ++  DP +W++  +A  + ++ + +   +S I E
Sbjct: 12  ELREKYLNFVKLIDPDKLNMELKKMESEMSDPEIWKDQRKAGEISKKVRRIKELLSDISE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+    D  +   + L E+D  I Q+    +Q ++  +   Q E +L+   D N+AYL +
Sbjct: 72  IERNFEDIDV--GIELSEEDPGIAQDIEKIVQEVEKNIRRFQLELILNDPLDQNNAYLSI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTES DWA MLLRMY RWAE++ F  E L+   GEEAG+KSAT+L+KG  AYG+L
Sbjct: 130 HPGAGGTESHDWAQMLLRMYMRWAERKGFIVELLDFQPGEEAGLKSATILVKGEYAYGYL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+D+  RRHTSF+S+ V P + D I++EI   D RIDT+RASG GGQ
Sbjct: 190 KHERGVHRLVRISPFDAAKRRHTSFASVNVVPEISDDIDVEIKPEDIRIDTFRASGHGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN TDSAVRITH+PTG+VV CQ ERSQH+NKA A  +L+AKLY+LEL KR E  +  + 
Sbjct: 250 YVNRTDSAVRITHLPTGIVVSCQSERSQHQNKALAMKVLKAKLYQLELAKRREQLDEIQG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              EI WG QIRSY+LQPY +VKD RT+IE  +   VLDG+LD F++A L
Sbjct: 310 ELKEISWGNQIRSYILQPYTLVKDHRTDIETGNFDAVLDGELDQFIEAEL 359


>gi|210631232|ref|ZP_03296815.1| hypothetical protein COLSTE_00700 [Collinsella stercoris DSM 13279]
 gi|210160119|gb|EEA91090.1| hypothetical protein COLSTE_00700 [Collinsella stercoris DSM 13279]
          Length = 376

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 150/354 (42%), Positives = 202/354 (57%), Gaps = 3/354 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +L  +      + A  R++ L   +  P  W +   A+  M E   +   +  +   
Sbjct: 17  LSARLTEVEAYLHIEEARGRVTELEEASAAPGFWDDAEAARAYMAELAQVKGDVGLVDRA 76

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV--EYKQFESLLSGEADSNDAYLE 120
            +RL D    LELA E                 +L    +  +  S  +GE D   A L 
Sbjct: 77  HERLSDARAALELADEMGQDGAEFIAEAAAAAEELTRAIDEMELSSWFTGEFDHGSAILS 136

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +  G GG E+QDW  ML +MY ++  +R +K    +    E  GI  AT+ ++G +A+G 
Sbjct: 137 IKPGQGGLEAQDWTFMLFKMYMKYFARRGWKVTVNDCPAAEVIGIDRATITVEGKDAFGM 196

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E GVHRLVRISP D+  RR T+F+ + V PV+ D IEIE++  D R+D Y ASG GG
Sbjct: 197 LRAEAGVHRLVRISPTDAKKRRQTTFAGVEVIPVLPDDIEIEVAPDDIRVDVYHASGPGG 256

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA    +L+A+LYELEL+KR E  +   
Sbjct: 257 QGVNTTDSAVRVTHIPTGIVVTCQNERSQIQNKAACMQILKARLYELELEKRAETLDEIR 316

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAI 353
             KTEIG+G QIRSYVL PYQMVKDLR+ +E ++   VL DGDLD F+      
Sbjct: 317 GPKTEIGFGNQIRSYVLYPYQMVKDLRSGVETSNVDSVLEDGDLDPFIIGYHRW 370


>gi|237751447|ref|ZP_04581927.1| peptide chain release factor 2 [Helicobacter bilis ATCC 43879]
 gi|229372813|gb|EEO23204.1| peptide chain release factor 2 [Helicobacter bilis ATCC 43879]
          Length = 367

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 175/349 (50%), Positives = 238/349 (68%), Gaps = 2/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +   +  + + D+  +RL  +N        W +  +A  + +E++  +  +S   E+
Sbjct: 13  LQNKAQNIAKILNPDSLQKRLDEINALESHQEFWNDAKKAGEITKEKRKCERILSTYTEM 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   L E+A  E D S L+   +N++ ++  ++  + E +LSGE DS +A + + 
Sbjct: 73  KAELDDARELFEIAESEGDSSTLELLFENVESLQSHIQKVEIEVMLSGEFDSTNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+ML RMY RW+E+R FK E L+  DGEEAGIK A  +IKG NAYG+ K
Sbjct: 133 PGAGGTESQDWASMLYRMYLRWSERRGFKVELLDYQDGEEAGIKGAAFIIKGENAYGYAK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ V P + + I+IEI + D RIDTYRASGAGGQH
Sbjct: 193 SENGVHRLVRISPFDANAKRHTSFASVQVSPELSEDIDIEILDKDIRIDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+RITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELE  K+ E   +  + 
Sbjct: 253 VNKTESAIRITHFPTGIVVQCQNDRSQHKNKATAMKMLQSKLYELERLKQSE--GVANAE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K+EIGWG QIRSYVL PYQ VKDLR+N   +    VLDGD+DD +++ L
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDLRSNYATSDTDGVLDGDIDDLIESVL 359


>gi|291544247|emb|CBL17356.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus sp.
           18P13]
          Length = 375

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 160/350 (45%), Positives = 233/350 (66%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             QL  LG +     A   L  L  +      W +  +++ +M++ + L+N +   + + 
Sbjct: 15  RPQLKELGDVLQVARAQSELDDLRIQVTYDGFWDDAEKSQKVMQKIRKLENTVDKFRHLN 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            +L D + L++L +EEDD S  +E   +++  K E+E ++  +LL+GE D ++A L  HA
Sbjct: 75  QKLEDTIALIDLCMEEDDDSSNEEILQDVESFKEELEAEKLSTLLTGEYDGSNAILTFHA 134

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDWA ML RMY RWAE+  FK   L+  DG+EAG+KSA++L++G NAYG+LK 
Sbjct: 135 GAGGTEAQDWAQMLYRMYNRWAERHDFKVSLLDYLDGDEAGLKSASMLVEGQNAYGFLKS 194

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SP+D++ RRHTSF+++ V P +DDS+E++I   D ++D +R+SGAGGQH+
Sbjct: 195 EAGVHRLVRVSPFDASGRRHTSFAALEVMPEIDDSMEVDIRLEDVKMDVFRSSGAGGQHI 254

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVR+THIPTG+VV CQ +RSQ +N+  A  MLR+KL E++ ++  E  +  +  +
Sbjct: 255 NKTSSAVRLTHIPTGIVVSCQTQRSQFQNRDFAMKMLRSKLVEIKEREHLEKISDIKGVQ 314

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            EI WG QIRSYV  PY + KD RT  E  + S V+DGDLD F+ A L  
Sbjct: 315 KEIAWGAQIRSYVFMPYTLAKDHRTGFENGNISAVMDGDLDGFINAYLKA 364


>gi|148240661|ref|YP_001226048.1| peptide chain release factor 2 [Synechococcus sp. WH 7803]
 gi|147849200|emb|CAK24751.1| Protein chain release factor B [Synechococcus sp. WH 7803]
          Length = 356

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 148/343 (43%), Positives = 206/343 (60%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      R   L      P  W +   A+  MR    +   +  +   Q  + D  
Sbjct: 3   RTVFDVPALNARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAMLQQLDTWQGAVSDAQ 62

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             LEL   E D  +L E    L +++ +++  + E LLSGE D   A L ++AGAGGT++
Sbjct: 63  ATLELYDLEPDDDMLGEAQSGLTQLRRDLDRWELERLLSGEYDKEGAVLSINAGAGGTDA 122

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRWAE R  K    E+ +GEEAGIKSAT+ I+G  AYG+L+ E+G HRL
Sbjct: 123 QDWAQMLLRMYTRWAEDRGMKVTVDELSEGEEAGIKSATIEIEGRYAYGYLRNEKGTHRL 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+++N +R TSF+ + V P +++ ++I+I + D  + T R+ GAGGQ+VN  ++AV
Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKLEEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI H+PTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R            E  WG 
Sbjct: 243 RILHVPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QIR+YV  PYQMVKDLRT  E      V+DGDLD F++A L  
Sbjct: 303 QIRNYVFHPYQMVKDLRTQEETNDVQGVMDGDLDPFIQALLRQ 345


>gi|332662344|ref|YP_004445132.1| hypothetical protein Halhy_0347 [Haliscomenobacter hydrossis DSM
           1100]
 gi|332331158|gb|AEE48259.1| hypothetical protein Halhy_0347 [Haliscomenobacter hydrossis DSM
           1100]
          Length = 358

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 154/350 (44%), Positives = 221/350 (63%), Gaps = 3/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L  LG   D +N + ++      + DP  W +   A+ +++E +   N ++  K  
Sbjct: 9   LRERLVSLGRYLDVENRLIQIEEQEQLSLDPTFWNDPKRAETILKELKSHKNWVAQYKAA 68

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  + D  +LLE   E +      +           +E  +F + L+   D  +  LE++
Sbjct: 69  EAEVDDAEVLLEFNKEGEATEEEVDQKYAEA--LAVIEGLEFHTTLNQPEDELNVVLEIN 126

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA ML RMY  WA++R FK   L   DG+ AG+KSA++ I+G   +G LK
Sbjct: 127 AGAGGTEACDWAEMLYRMYMMWAQRRGFKFTELNRQDGDVAGLKSASIEIEGEYVFGLLK 186

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SPY+S  +R TSFSS++V+P+VDDSIEIEI+ +D   DT+RASGAGGQH
Sbjct: 187 GENGVHRLVRVSPYNSQGKRMTSFSSVFVHPMVDDSIEIEINPADLEWDTFRASGAGGQH 246

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVR+ H+P+G+V +CQQERSQH N+ +A  ML+++LYE EL+K++      ES 
Sbjct: 247 VNKTESAVRVRHLPSGIVAECQQERSQHMNRDKAMQMLKSRLYERELEKQKAEKETIESG 306

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K +  WG QIRSYVL   + VKD RT  + +    VL+GD+D+F+KA L 
Sbjct: 307 KMKNEWGSQIRSYVLDD-RRVKDHRTGYQTSQTDAVLNGDIDEFLKAFLM 355


>gi|38233352|ref|NP_939119.1| peptide chain release factor 2 [Corynebacterium diphtheriae NCTC
           13129]
 gi|76363349|sp|Q6NIM2|RF2_CORDI RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|38199612|emb|CAE49268.1| peptide chain release factor 2 [Corynebacterium diphtheriae]
          Length = 369

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 152/353 (43%), Positives = 217/353 (61%), Gaps = 2/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + + ++   R+  L  +  DP LW +   A+ +  E   +   +  +  
Sbjct: 11  QLDSTLTTIEKVMNPEDLESRVRELEQQASDPTLWDDPDTAQKVTTELSSVQAKLKKLST 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ R+ D  ++ EL  +E+    L    + L  +  +VE  + +++LSGE DS +A + +
Sbjct: 71  LRQRIDDLPVMYEL-ADEEGEDALALADEELAELTADVEALEVKTMLSGEYDSREAVINI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMY RWAEK   K +  +I   EEAGIKSAT ++ G   YG L
Sbjct: 130 RSGAGGVDAADWAEMLMRMYIRWAEKNDHKVDIYDISYAEEAGIKSATFVVHGEYMYGQL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ I V PVV+ +  I+I +S+ R+D YR+SG GGQ
Sbjct: 190 SVEQGAHRLVRISPFDNQGRRQTSFAEIEVLPVVEQTDHIDIPDSEVRVDVYRSSGPGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E + Q+     +   +
Sbjct: 250 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAELDALGA 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                 WG Q+RSYVL PYQMVKDLRTN E   P  VLDGD+D  ++A +  +
Sbjct: 310 G-GNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPQKVLDGDIDGLLEAGIRWR 361


>gi|326798108|ref|YP_004315927.1| hypothetical protein Sph21_0678 [Sphingobacterium sp. 21]
 gi|326548872|gb|ADZ77257.1| hypothetical protein Sph21_0678 [Sphingobacterium sp. 21]
          Length = 361

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 149/351 (42%), Positives = 218/351 (62%), Gaps = 2/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +   L    D D   + ++     T  P  W +  EA+ +++  +          E
Sbjct: 8   ELRDRAASLRRHLDIDAKQKEINQEQEITLKPDFWDHPKEAEKVLQSIKSKKVWTDSFDE 67

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   + D  ++ +     D      +           VE  +F+++LS E D   A L++
Sbjct: 68  LLQAIDDASVMFDFYQSGDASEQEADELFQEA--LKRVEELEFKNMLSAEEDQLTAILQI 125

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGTES DWA ML+RMY  W EK  +K    +  +G+ AG+KS TL   G  AYG+L
Sbjct: 126 TAGAGGTESCDWAAMLMRMYIMWGEKNGYKVTEQDFLEGDVAGVKSVTLQFDGNFAYGYL 185

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDD+IEIE+ +SD   DT+R+ GAGGQ
Sbjct: 186 KGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIEVKDSDIEWDTFRSGGAGGQ 245

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++AVR+ H P+G+V++ Q+ RSQ +NK  A  +L+++LYE+E++KR E     E 
Sbjct: 246 NVNKVETAVRLHHKPSGIVIKNQESRSQLQNKDNAMRLLKSQLYEIEMRKRMETTAAIEG 305

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           SK +I WG QIR+YVL PY++VKDLRT  E ++   VLDG+LD+F+K+ L 
Sbjct: 306 SKKKIEWGSQIRNYVLHPYKLVKDLRTGHETSNTQAVLDGELDEFLKSYLM 356


>gi|86739504|ref|YP_479904.1| peptide chain release factor 2 [Frankia sp. CcI3]
 gi|123751448|sp|Q2JEW7|RF2_FRASC RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|86566366|gb|ABD10175.1| bacterial peptide chain release factor 2 (bRF-2) [Frankia sp. CcI3]
          Length = 366

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 155/354 (43%), Positives = 220/354 (62%), Gaps = 4/354 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D +   +R   L  +  DP LW +   A+ + R        I+ ++ 
Sbjct: 11  QLDATLTGIETVLDVEGLRRRAEDLERQAADPDLWSDQDRAQAVTRRLSSTRGDIARVEG 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D     +L  E+    +L E + +L R+  ++   +  +LLSGE D  DA +++
Sbjct: 71  LRRRLDDIAAAADLGDED----LLAEAAADLPRLSSDIAGLEVRTLLSGEYDERDAIVQL 126

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG ++ DW  MLLRMY RWAE+  + TE  +  + EEAG+KSAT  +K P AYG L
Sbjct: 127 SAGAGGVDAADWTAMLLRMYLRWAERHGYATEVFDTSEAEEAGLKSATFQVKAPYAYGTL 186

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVRISP+D+ +RR TSF+ + V PVV+ S  ++I + D RID +R+SG GGQ
Sbjct: 187 RSEHGVHRLVRISPFDNQNRRQTSFAGVEVTPVVELSDHVDIDDKDLRIDIFRSSGPGGQ 246

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A  +L+AKL E    +          
Sbjct: 247 GVNTTDSAVRITHLPTGIVVTCQNERSQLQNKAAAMIVLQAKLLERRRAEEAAEKQRITG 306

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              ++ +G QIR+YVL PYQMVKDLRT+ E ++ S VLDG+LDDF+ A +  ++
Sbjct: 307 GPQDVSFGSQIRNYVLHPYQMVKDLRTDTETSNTSGVLDGELDDFIDAEIRWRR 360


>gi|57234653|ref|YP_181313.1| peptide chain release factor 2, programmed frameshift
           [Dehalococcoides ethenogenes 195]
 gi|57225101|gb|AAW40158.1| peptide chain release factor 2, programmed frameshift
           [Dehalococcoides ethenogenes 195]
          Length = 362

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 149/352 (42%), Positives = 211/352 (59%), Gaps = 2/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  ++       D       ++ L + +  P  WQ+   A+  M++           + 
Sbjct: 7   ELKSRILSDMVRLDIAAKELEITELESASASPDFWQDQQNAQKAMKKLAANKRVSEVWRG 66

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ R+ D L L  L    +D S+  E    +  +  E++  +     SG+ DS +A L V
Sbjct: 67  LEQRVNDLLELFAL--THEDPSLGNEIEREVNTLTAEIDTLEVGLAFSGQYDSRNALLTV 124

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGG ESQDWA MLLRM+ RWAEK+ F  E L+   GEEAGIKSATL I+G  AYG+L
Sbjct: 125 HAGAGGVESQDWAGMLLRMFMRWAEKKGFGMEVLDQSPGEEAGIKSATLQIEGEYAYGFL 184

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRL+R+SP+D++  RHTSF+ + V P  +DS++I+I   D +ID +R+SG GGQ
Sbjct: 185 KSEHGVHRLIRLSPFDADHARHTSFALVEVMPEAEDSVDIDIKPEDIKIDMFRSSGPGGQ 244

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +V    +AVR+THIP+G+VV  Q ERSQH+N+  A  +L +KL  +E+ KR E     + 
Sbjct: 245 NVQKVSTAVRVTHIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKIKG 304

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            +    WG QIRSYVL PY+MVKD RT+ E  +   VL+G+LD F+ A L  
Sbjct: 305 ERISAEWGNQIRSYVLHPYKMVKDHRTDYEVGNAEAVLEGELDGFINAYLRQ 356


>gi|86143360|ref|ZP_01061762.1| Peptide chain release factor 2 [Leeuwenhoekiella blandensis MED217]
 gi|85830265|gb|EAQ48725.1| Peptide chain release factor 2 [Leeuwenhoekiella blandensis MED217]
          Length = 368

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 155/351 (44%), Positives = 222/351 (63%), Gaps = 2/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++L+ L      D     +     KT DP+ W +  EA+  MR  +   N +   ++ 
Sbjct: 10  LVQRLDALKMHLGIDQKRVEIQNEEEKTFDPNFWNDPKEAEQFMRMLREKKNWVKDYEQA 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
                D  +LLE   E D      +   +       VE  +F+++LS E D   A L++ 
Sbjct: 70  VTLTEDLEVLLEFHKEGDASEEEVDKQYDKVTRL--VEAMEFKNMLSDEGDDLSAVLQIT 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML+RMY  W+EK  FK + L   +G+ AGIK+ TL I+G  A+GWLK
Sbjct: 128 AGAGGTESCDWASMLMRMYLMWSEKNGFKVKELNYQEGDVAGIKTVTLEIEGAYAFGWLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DSN++RHTSF+S++VYP+ DDSIEI+I+ +D   D  R+SGAGGQ+
Sbjct: 188 SENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDSIEIDINPADISWDFARSSGAGGQN 247

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++   +TH PTG+V+   + RSQ +N+ +A  ML+++LYE+EL+KR+   +  E+ 
Sbjct: 248 VNKVETKAILTHHPTGIVIHNSETRSQLENREKAMQMLKSQLYEIELKKRQAARDEIEAE 307

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K  I WG QIR+YVL PY+++KD+RT  E  +   VLDGDLD+F+KA L +
Sbjct: 308 KKSIEWGSQIRNYVLHPYKLIKDVRTGEETGNTDAVLDGDLDNFLKAYLMM 358


>gi|87123562|ref|ZP_01079413.1| Peptide chain release factor 2 [Synechococcus sp. RS9917]
 gi|86169282|gb|EAQ70538.1| Peptide chain release factor 2 [Synechococcus sp. RS9917]
          Length = 356

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 148/343 (43%), Positives = 205/343 (59%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      R   L      P  W +   A+  MR    +   +  +++ +  + D  
Sbjct: 3   RTVFDVPALKARQQDLEQLASQPDFWDDQPNAQKQMRRLDEVKAQLQQLEQWRGAIDDAQ 62

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             LEL   E D  +L E  + L  ++  ++  + E LLSGE D   A L ++AGAGGT++
Sbjct: 63  ATLELYDLEPDDDMLSEAQEGLTTLRHALDRWELERLLSGEYDKEGAVLSINAGAGGTDA 122

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRWAE    K    E+ +GEEAGIKSAT+ I G  AYG+L+ E+G HRL
Sbjct: 123 QDWAQMLLRMYTRWAEDHGMKVSVDELSEGEEAGIKSATIEIDGRYAYGYLRNEKGTHRL 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+++N +R TSF+ + V P ++D ++I+I + D  + T R+ GAGGQ+VN  ++AV
Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKLEDEVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI HIPTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R            E  WG 
Sbjct: 243 RILHIPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QIR+YV  PYQMVKDLRT  E T    V+DG LD F++A L  
Sbjct: 303 QIRNYVFHPYQMVKDLRTQEETTDVQGVMDGHLDPFIQALLRQ 345


>gi|19552028|ref|NP_600030.1| peptide chain release factor 2 [Corynebacterium glutamicum ATCC
           13032]
 gi|62389691|ref|YP_225093.1| peptide chain release factor 2 [Corynebacterium glutamicum ATCC
           13032]
 gi|145294961|ref|YP_001137782.1| peptide chain release factor 2 [Corynebacterium glutamicum R]
 gi|24638152|sp|Q8NS78|RF2_CORGL RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|166223627|sp|A4QCD3|RF2_CORGB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|21323567|dbj|BAB98194.1| Protein chain release factor B [Corynebacterium glutamicum ATCC
           13032]
 gi|41325026|emb|CAF19507.1| PEPTIDE CHAIN RELEASE FACTOR 2 [Corynebacterium glutamicum ATCC
           13032]
 gi|140844881|dbj|BAF53880.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 368

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 154/353 (43%), Positives = 220/353 (62%), Gaps = 3/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + +      R+  L  +  DP LW +   A+ +  E  H+   +  I +
Sbjct: 11  ELDSTLTTIEKVLNPQEMSDRVRELEAQAADPSLWDDPDHAQQVTSELSHVQAELRKITD 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ R+ D  I++ELA EED  + +    + L  ++  ++  + +++LSGE D+ +A + +
Sbjct: 71  LRQRIEDLPIMVELAEEEDGDTSI--AEEELADLRSLIDALEVKTMLSGEYDAREAVINI 128

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMYTRWAEK   K +  +I   EEAGIKSAT ++ G   YG L
Sbjct: 129 RSGAGGVDAADWAEMLMRMYTRWAEKNGHKVDIYDISYAEEAGIKSATFVVHGDYMYGQL 188

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ + V PVV+    I+I ++D R+D YR+SG GGQ
Sbjct: 189 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEKVDSIDIPDADVRVDVYRSSGPGGQ 248

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E + Q+     +   +
Sbjct: 249 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAEMDALGA 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                 WG Q+RSYVL PYQMVKDLRTN E   P  VLDGD+D  ++A +  +
Sbjct: 309 G-GNASWGNQMRSYVLHPYQMVKDLRTNFEVNDPQKVLDGDIDGLLEAGIRWR 360


>gi|320106646|ref|YP_004182236.1| hypothetical protein AciPR4_1419 [Terriglobus saanensis SP1PR4]
 gi|319925167|gb|ADV82242.1| hypothetical protein AciPR4_1419 [Terriglobus saanensis SP1PR4]
          Length = 375

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 177/353 (50%), Positives = 234/353 (66%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  ++  L    D     + L+ +  ++ DP +W +   ++ LMRER+ L+  +S   ++
Sbjct: 12  VRARVRDLREYLDSTRLKKDLARIEEQSSDPAIWADPARSQPLMRERKRLEGLLSDDADL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R  D        L  +  ++  E +  +  I+  +E  +  ++LS E D  +A + VH
Sbjct: 72  ERRSGDIDA--YFELGREGENVEPELAREIASIEQAIEKLESRTMLSEETDPLNAIVTVH 129

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA ML+RMY RW E++ FKTE  EI DG+EAGIKSAT  I G  AYG L 
Sbjct: 130 PGAGGTESQDWAEMLMRMYLRWGERQGFKTEINEIQDGDEAGIKSATFTITGDFAYGLLS 189

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+DS  RRHTSFSS++V P +DDSI I+I   D RIDTYR+ G GGQH
Sbjct: 190 GETGVHRLVRISPFDSAKRRHTSFSSVFVSPEIDDSIVIDIKPDDLRIDTYRSGGKGGQH 249

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+V  CQ ERSQHKNK +A  MLR++LYE EL K++ I+   E S
Sbjct: 250 VNTTDSAVRITHLPTGIVAGCQNERSQHKNKDKAMKMLRSRLYEFELDKKKAISRKLEDS 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K EI +G QIRSYVLQPY+M KDLRT +E      VLDGDL+ F++  L +++
Sbjct: 310 KLEINFGSQIRSYVLQPYRMAKDLRTRVEVGDVDRVLDGDLEPFIRGFLRMRR 362


>gi|269958738|ref|YP_003328525.1| peptide chain release factor 2 [Anaplasma centrale str. Israel]
 gi|269848567|gb|ACZ49211.1| peptide chain release factor 2 [Anaplasma centrale str. Israel]
          Length = 338

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 170/332 (51%), Positives = 226/332 (68%), Gaps = 2/332 (0%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             L+++     LW +   AK L+ ER  ++  ++  + ++    + + LL++A E D   
Sbjct: 2   EELDSRCSSASLWDDQENAKKLLSERARVEEVLASFRALEKEYAECVELLDVADESDSEF 61

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
           +       L +++  V  K+ E + SGEAD +  +L +  GAGGTES DWA MLLRMY R
Sbjct: 62  LDG-LWSALTQLERRVSQKKAECMFSGEADGSGCFLVIRPGAGGTESNDWAAMLLRMYVR 120

Query: 144 WA-EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           WA     F TE ++  DGE AG+KS T+ I G  AYGW K E GVHRLVRISP+DS+SRR
Sbjct: 121 WAGTFHGFTTEIVDKIDGEAAGLKSVTVKISGNGAYGWAKTESGVHRLVRISPFDSSSRR 180

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSF+S+ V P+ DD I+IEI E D RIDTYRASGAGGQHVN T+SAVRITH+P+G+VVQ
Sbjct: 181 HTSFASVEVSPIADDKIDIEILEKDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVVQ 240

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
           CQ  RSQH+N+A+A+++LR++LYE+ELQ++E+       S+ +IGWG QIRSYV+ PY+M
Sbjct: 241 CQTSRSQHQNRAEAYSLLRSRLYEMELQEKEKKMAQEHDSRCDIGWGHQIRSYVMHPYRM 300

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           VKDLRT  E      VLDGDLD F+ A L  K
Sbjct: 301 VKDLRTGHETGDVDAVLDGDLDKFIAAALTYK 332


>gi|226305794|ref|YP_002765754.1| peptide chain release factor 2 [Rhodococcus erythropolis PR4]
 gi|229491026|ref|ZP_04384859.1| peptide chain release factor 2 [Rhodococcus erythropolis SK121]
 gi|259585230|sp|C0ZXD0|RF2_RHOE4 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|226184911|dbj|BAH33015.1| peptide chain release factor 2 [Rhodococcus erythropolis PR4]
 gi|229322142|gb|EEN87930.1| peptide chain release factor 2 [Rhodococcus erythropolis SK121]
          Length = 368

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 152/352 (43%), Positives = 216/352 (61%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L     + D +   +R+  L  +  DP LW +   A+ +  +  H    +  I  +
Sbjct: 12  LDTTLRTCESVVDVEELRRRIDELEHQAADPGLWNDQEHAQQVTSQLSHAQAELRRIVAL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++RL +  IL ELA + +    + +       ++ ++   + +++LSGE D  DA + + 
Sbjct: 72  RERLDEMPILYELAED-EGPDAVADADAERASLRDDIAAMEVKTMLSGEYDERDALINIR 130

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ DWA ML+RMY RWAEK  +  E  +    EEAG+KSAT  IKGP  YG L 
Sbjct: 131 SGAGGIDAADWAEMLMRMYIRWAEKHDYGVEVYDTSYAEEAGLKSATFAIKGPYTYGTLS 190

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+ + V PVV+ +  IEI+E+D R+D YR+SG GGQ 
Sbjct: 191 VEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIEINENDIRVDVYRSSGPGGQS 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL  ++ Q+     +  +  
Sbjct: 251 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLAVKRQEERAEMDALKGD 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +   WG Q+RSYVL PYQMVKDLRT  E  +PS VLDGD+D F++A +  +
Sbjct: 311 -SGSSWGNQMRSYVLHPYQMVKDLRTEYEVNNPSAVLDGDIDGFLEAGIRWR 361


>gi|299144433|ref|ZP_07037513.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 386
           str. F0131]
 gi|298518918|gb|EFI42657.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 386
           str. F0131]
          Length = 348

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 176/339 (51%), Positives = 234/339 (69%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           LFD      ++  LN K  D   W N   A+ ++RE+ H  + I    ++   + +   L
Sbjct: 4   LFDLSEMRNKVKELNDKQMDVGFWDNAENAQKVIREQNHYQSKIDKYDKLIKSINEAEDL 63

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           ++L   EDD S   +   +L+ I+      + E+LL+GE DSN+  + +HAGAGGTE+QD
Sbjct: 64  IDLMEMEDDYSFYGDLKLDLENIEKLSNDFKLETLLNGEYDSNNCIISIHAGAGGTEAQD 123

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA+ML RMY R+AEKR F+ E L++   EEAGIKS TLLI G NAYG+LKGE+GVHRLVR
Sbjct: 124 WASMLNRMYVRYAEKRGFRVETLDMLKEEEAGIKSVTLLITGDNAYGYLKGEKGVHRLVR 183

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+D+N RRHTSF+S+ VYP +DD  E+EI   D +IDTYR+SGAGGQHVNTTDSAVRI
Sbjct: 184 ISPFDANKRRHTSFASLDVYPQLDDDNEVEIKAEDLKIDTYRSSGAGGQHVNTTDSAVRI 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           THIPTG+VVQCQ ERSQ +N+ +A NML+AKL  L  ++++E     + + ++I WG QI
Sbjct: 244 THIPTGIVVQCQNERSQIQNRDKAMNMLKAKLIALAEEEKKEKIEDLQGNYSQIAWGSQI 303

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           RSYV QPY +VKD RTN E    + V+DG LD+F+ + L
Sbjct: 304 RSYVFQPYTLVKDHRTNTEIGDVNKVMDGYLDEFINSYL 342


>gi|160947120|ref|ZP_02094287.1| hypothetical protein PEPMIC_01052 [Parvimonas micra ATCC 33270]
 gi|158446254|gb|EDP23249.1| hypothetical protein PEPMIC_01052 [Parvimonas micra ATCC 33270]
          Length = 349

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 150/339 (44%), Positives = 211/339 (62%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
            FD          L +++     W +   AK ++   ++L   I     +  ++ D++  
Sbjct: 3   HFDISKLEDEYKNLESQSFKEDFWNDSKSAKSILDNMKNLKFKIETFTSLSRKIEDSIEF 62

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           LE+  +E+     +E   N+  I+ E    +  +L+ GE DSN+A LE+HAGAGGT++QD
Sbjct: 63  LEILSDEEFMEYEKEALKNIYNIEKEYLSLKLNTLMVGEYDSNNAILEIHAGAGGTDAQD 122

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           W  ML R+YTRW   + F    L+ +   E GIKS TL + G NAYG+LKGE+GVHRLVR
Sbjct: 123 WTEMLQRLYTRWINSKGFSFSILDYNSDTEGGIKSVTLKVDGKNAYGFLKGEKGVHRLVR 182

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISPYDS+++RHTSF+S+ V+P +++  +IEI+  D RIDTYR+ GAGGQHVN TDSAVRI
Sbjct: 183 ISPYDSSNKRHTSFASVDVFPEIEEITDIEINPKDLRIDTYRSGGAGGQHVNKTDSAVRI 242

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           THIPTGV V CQ ERSQ  N+  A   L AKL  ++ ++  E     +   ++I WG QI
Sbjct: 243 THIPTGVTVSCQSERSQMFNRDTAMRQLIAKLLIIKQEENREKIEDIQGKYSQIAWGSQI 302

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           RSYV QPY +VKD RT  E  +   V++G++D+F+   L
Sbjct: 303 RSYVFQPYTLVKDHRTGYETGNVESVMNGNIDEFINQYL 341


>gi|332522300|ref|ZP_08398552.1| peptide chain release factor 2 [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332313564|gb|EGJ26549.1| peptide chain release factor 2 [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 327

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 149/325 (45%), Positives = 209/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L         +++   +    L + + E+D S+  E  
Sbjct: 1   MTEPDFWNDTISAQKTSQELNELKVKFDTFHNMENLSEETE--LYMEMLEEDESVKGELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           ++L ++   +   +   LLS   D N+A LE+H G+GGTE+QDWA+ML RMYTR+   + 
Sbjct: 59  ESLLKLDQILAAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVETLDYQAGDEAGIKSVTLSFQGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+ E  N  +  K EI WG QIRSYV  PY MVKD RTN
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGD+D F+ A L  +
Sbjct: 299 FEVAQVDKVMDGDIDGFIDAYLKWR 323


>gi|299137096|ref|ZP_07030279.1| peptide chain release factor 2 [Acidobacterium sp. MP5ACTX8]
 gi|298601611|gb|EFI57766.1| peptide chain release factor 2 [Acidobacterium sp. MP5ACTX8]
          Length = 375

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 173/351 (49%), Positives = 235/351 (66%), Gaps = 1/351 (0%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
           R+    G +FD     + L+ +  K  DP +W +  +++ LMRER+ L++ ++   E+  
Sbjct: 12  RKYATCGSIFDSPRLKKELAVIEEKIADPAVWADAAKSQPLMRERKRLESQLADDAELAR 71

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
           R  D     +L  E +  S+  +    +  +    E  +  ++LS E D+ +A + VH G
Sbjct: 72  RGEDIDAYFDLMREGEA-SVEPDLKREIDSLVAFSEALESRTMLSEENDTLNAIVTVHPG 130

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGGTESQDWA ML+RMY RWAE++ FKTE  E+ DG+EAGIKSAT  I G  A+G + GE
Sbjct: 131 AGGTESQDWAEMLMRMYLRWAERQGFKTEINELQDGDEAGIKSATFTITGDFAFGLIAGE 190

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHRLVRISP+D   RRHTSF+S++V P +DDSI I+I   D RIDTYR+ G GGQHVN
Sbjct: 191 TGVHRLVRISPFDQAKRRHTSFASVFVSPEIDDSIVIDIKPDDLRIDTYRSGGKGGQHVN 250

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRITH+PTG+V  CQ ERSQHKNK +A  MLR++LYE EL K++ ++   E SK 
Sbjct: 251 TTDSAVRITHLPTGIVAGCQNERSQHKNKEKAMKMLRSRLYEYELDKKKAVSRKLEDSKL 310

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           EI +G QIRSYVLQPY++ KDLRT +E      VLDG+L+ F++  L +++
Sbjct: 311 EINFGSQIRSYVLQPYRIAKDLRTRVEVGDVDRVLDGELEPFIRGYLKMRR 361


>gi|269955834|ref|YP_003325623.1| peptide chain release factor 2 [Xylanimonas cellulosilytica DSM
           15894]
 gi|269304515|gb|ACZ30065.1| peptide chain release factor 2 [Xylanimonas cellulosilytica DSM
           15894]
          Length = 370

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 140/353 (39%), Positives = 214/353 (60%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  + G+ D      +++ L+ +   P LW +   A+ +          ++ +K +
Sbjct: 13  LRSTLESIEGVSDPVALQAKIAVLSEQASVPDLWDDPEAAQKITSALSATQAELNRVKSL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             R+ D   L+EL  E  D   L E    +  I+ +++  +  +LLSGE D+ DA + + 
Sbjct: 73  GRRIDDVETLVELGQEMGDEDSLTEAEAEVVGIRKDLDALEVRTLLSGEYDARDAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A ML+RMY RWAE+  F T+ ++    EEAG+KSAT  +  P A+G L 
Sbjct: 133 AGAGGVDAADFAEMLMRMYLRWAERHGFPTKVMDTSYAEEAGLKSATFEVNAPYAFGNLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++ +  +EI ES+ ++D +R+SG GGQ 
Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIEQTDSVEIPESEIKVDVFRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  +  Q+           
Sbjct: 253 VNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLVRQQEEAAKKKELAGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +  WG Q+RSYVLQPYQMVKDLRT  E  + + V DG +D+F++A +  ++
Sbjct: 313 -IKASWGDQMRSYVLQPYQMVKDLRTEHESGNTAAVFDGAIDEFIEAGIRWRR 364


>gi|331090528|ref|ZP_08339381.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330405871|gb|EGG85399.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 337

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 155/331 (46%), Positives = 226/331 (68%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             L  K E+P  W++   ++ +MRE + L + +   + +     D  +L+E+  E++D S
Sbjct: 2   EELQKKIEEPGFWEDTETSQKIMRELKGLQSFLENAESLLTSYEDIAMLIEMVYEDNDES 61

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
           ++ E    +++ +   E  +  +LLSG  D ++A + +HAGAGGTES DWA+ML RMY+R
Sbjct: 62  MVGEIRREIRQFEKNFEEIRINTLLSGPYDKDNAIVTLHAGAGGTESCDWASMLYRMYSR 121

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           WAE++ F    L+  DG+  GIK+ T  + G NAYG+L+ E+GVHRLVRISP++S  +R 
Sbjct: 122 WAERKGFSISVLDYLDGDITGIKTVTFEVNGENAYGYLQSEKGVHRLVRISPFNSAGKRQ 181

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSF+S  V P ++D I+IEI+E D ++DTYRASGAGGQHVN T SA+RITH+PTG+VVQC
Sbjct: 182 TSFASCDVIPDIEDEIDIEINEDDLKVDTYRASGAGGQHVNKTSSAIRITHLPTGIVVQC 241

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           Q ERSQH N+ +A  ML+AKLY ++ Q++ +  +       EIG+G QIRSYV+QPY +V
Sbjct: 242 QNERSQHSNREKAMQMLKAKLYLIKQQEQADKVSDIRGEVKEIGFGNQIRSYVMQPYTLV 301

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KD RTN+E  + + VLDGD++ F+ A L  +
Sbjct: 302 KDHRTNVENGNVTAVLDGDIEPFINAYLKKR 332


>gi|149194096|ref|ZP_01871194.1| peptide chain release factor 2 [Caminibacter mediatlanticus TB-2]
 gi|149136049|gb|EDM24527.1| peptide chain release factor 2 [Caminibacter mediatlanticus TB-2]
          Length = 364

 Score =  253 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 174/354 (49%), Positives = 238/354 (67%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +L  +  +   D   +RL  +     DP+ W +   +  + +E+  +   +   K+
Sbjct: 12  ELENKLKNIESILKPDELQKRLDEITQMENDPNFWNDPKNSAKIQKEKNAILRKLEKYKK 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            ++ L DN  + ELA  E+D   L E  ++++ ++  +   + E +LSGE D  +A + +
Sbjct: 72  AKNSLQDNKDMYELATMEEDEETLNEVFNDVKELEKIIRDLEIEVMLSGENDDKNAIITI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTES DWA+ML RMY R+AE+R +K + L+   G+EAGIK AT+L+KG NAYG+L
Sbjct: 132 HPGAGGTESHDWASMLYRMYLRYAERRGWKVDILDYQAGDEAGIKDATILVKGENAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVR+SP+DS  RRHTSF+S+ V P +DD IEIEI E D RID YRASGAGGQ
Sbjct: 192 KAENGIHRLVRVSPFDSGGRRHTSFASVQVSPEIDDDIEIEIDEKDIRIDVYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+VV CQQ+RSQHKNK  A+ ML++KLYELEL+KR+        
Sbjct: 252 HVNKTESAVRITHIPTGIVVSCQQDRSQHKNKEMAFKMLKSKLYELELEKRKAEEEG--K 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            K E+GWG QIRSYVL PYQ VKD R+N   +   D+LDGDLD+ ++  L  ++
Sbjct: 310 PKDEMGWGHQIRSYVLFPYQQVKDNRSNKAYSKVDDILDGDLDEIIEDVLISQQ 363


>gi|78213950|ref|YP_382729.1| peptide chain release factor 2 [Synechococcus sp. CC9605]
 gi|78198409|gb|ABB36174.1| peptide chain release factor 2 [Synechococcus sp. CC9605]
          Length = 356

 Score =  253 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 150/343 (43%), Positives = 206/343 (60%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      R   L      P  W +   A+  MR    +   +S +   +  + D  
Sbjct: 3   RTVFDVPALNARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAQLSQLGGWRGAVDDAQ 62

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             LEL   E D  +LQE  + L +++  ++  + E LLSGE D   A L ++AGAGGT++
Sbjct: 63  ATLELYELEPDEDLLQEAQNGLNQLRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDA 122

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRWAE    K    E+ +GEEAGIKS T+ I+G  AYG+L+ E+G HRL
Sbjct: 123 QDWAQMLLRMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRL 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+++N +R TSF+ + V P +++ ++++I E D  I T R+ GAGGQ+VN  ++AV
Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKIEEEVKLDIPEKDLEITTSRSGGAGGQNVNKVETAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI HIPTG+ V+C QERSQ +NK +A  +L AKL  +  ++R            E  WG 
Sbjct: 243 RILHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QIR+YV QPYQMVKDLRTN E      V+DG LD F+ A+L  
Sbjct: 303 QIRNYVFQPYQMVKDLRTNEETNDVQAVMDGALDPFIDASLRQ 345


>gi|317968157|ref|ZP_07969547.1| peptide chain release factor 2 [Synechococcus sp. CB0205]
          Length = 356

 Score =  253 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 143/341 (41%), Positives = 207/341 (60%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      R   L      P  W +   A+  MR+   +   +  + + +  + D  
Sbjct: 3   RTVFDVAALKARQQDLEQLASQPDFWDDQKLAQSKMRQLDEVKAQLEQLSQWKGAVADAE 62

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +E+   E D  +L E+   L++++ +++  + E LLSG  D   A + ++AGAGGT++
Sbjct: 63  ATVEIYGLEPDDELLSESDAALKKLRADLDRWELERLLSGTYDKEGAVISINAGAGGTDA 122

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA ML+RMYTRWAE    K    E+ DGEEAGIKS T+ I+G  AYG+L+ E+G HRL
Sbjct: 123 QDWALMLMRMYTRWAEDHGMKVTVDELSDGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRL 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+++N +R TSF+ + V P +++ ++++I E D  I T R+ GAGGQ+VN  ++AV
Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKIEEEVKLDIPEKDLEITTSRSGGAGGQNVNKVETAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI HIPTG+ V+C QERSQ +NK +A  +L AKL  +  ++R            E  WG 
Sbjct: 243 RILHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIR+YV  PYQMVKDLRT  E T    V+DGDLD F+++ L
Sbjct: 303 QIRNYVFHPYQMVKDLRTQHETTDVQGVMDGDLDPFIQSLL 343


>gi|317493835|ref|ZP_07952252.1| peptide chain release 2 [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918162|gb|EFV39504.1| peptide chain release 2 [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 320

 Score =  253 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 175/318 (55%), Positives = 222/318 (69%), Gaps = 1/318 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W     A+ L +ER  L+  ++ I ++   L D   LLELA+E DD     E    L ++
Sbjct: 2   WNEPERAQALGKERSSLEEIVNTINQMTQGLDDVSGLLELAIEADDEETFNEAVVELDQL 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
             ++   +F  + SGE DS D Y+++ AG+GGTE+QDWA+MLLRM+ RWAE + FKTE +
Sbjct: 62  DAKLAQLEFRRMFSGEYDSADCYIDIQAGSGGTEAQDWASMLLRMFLRWAEAKGFKTEII 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E  DGE AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP V
Sbjct: 122 EESDGEVAGLKSATVKISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEV 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK Q
Sbjct: 182 DDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQ 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A   L+AKLYE E+QK+     + E +K++IGWG QIRSYVL     +KDLRT +E  + 
Sbjct: 242 AMRQLKAKLYEYEMQKKNAEKQVMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNT 300

Query: 336 SDVLDGDLDDFMKATLAI 353
             VLDGDLD F++A+L  
Sbjct: 301 QAVLDGDLDRFIEASLKA 318


>gi|295426388|ref|ZP_06819038.1| peptide chain release factor RF2 [Lactobacillus amylolyticus DSM
           11664]
 gi|295063756|gb|EFG54714.1| peptide chain release factor RF2 [Lactobacillus amylolyticus DSM
           11664]
          Length = 332

 Score =  253 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 156/325 (48%), Positives = 208/325 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P+ W +  +A+ L+ E   L        E++    D    LEL  EE D  + +E  
Sbjct: 1   MAEPNFWNDQDQAQKLISETNLLKEKRDSFLELKKEYEDETTALELIKEEPDKELQEEVE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +NL  ++      + + L+SG+ DS++A +E+H GAGGTE+ DWA+MLLRMY R+ E   
Sbjct: 61  NNLTHLQSAFHNYELDLLMSGKYDSHNALVEIHPGAGGTEAMDWASMLLRMYQRYCESVG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E  +   GEEAG+KS ++ + G NAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 FKFEINDYEPGEEAGVKSVSIRVSGKNAYGMLKSENGVHRLVRISPFDSAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDSI+I+I   D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ
Sbjct: 181 EVIPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A N LRAKL+ LE +K+ +     +  + EIGWG QIRSYV  PY +VKDLRTN
Sbjct: 241 LQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DG L  F+ A L  +
Sbjct: 301 YETADVKGVMDGKLQPFIYAYLQWR 325


>gi|255542882|ref|XP_002512504.1| peptide chain release factor, putative [Ricinus communis]
 gi|223548465|gb|EEF49956.1| peptide chain release factor, putative [Ricinus communis]
          Length = 550

 Score =  253 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 154/352 (43%), Positives = 225/352 (63%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +++ +  +     W   + RL  L+ +   P LW + + A  + RE   L      +   
Sbjct: 142 IAQSIQVIKKRLQWKKLMVRLDLLSVQLNKPDLWDDPVLAGKISREHGSLMAKRKEVTAF 201

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L +++ +++LA EEDD  +  E+   L  ++   + K+ E+LL+GE DS   Y+EV 
Sbjct: 202 ERELLEHIDMIKLAREEDDAELESESLKALFHMRRNSKEKELEALLAGEQDSCSCYIEVQ 261

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTES DWA M+++MY  WA++R +    ++   GE AGIK AT+ + G  A+G+ K
Sbjct: 262 SGAGGTESMDWAKMVMQMYKLWAQRRGYNVTVVDEMPGEIAGIKRATIKVDGEYAFGYAK 321

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+DS  RRHTSF+++ V P+  D S  ++I+ESD RI+ YR+ G GGQ
Sbjct: 322 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGSTHVQINESDLRIERYRSGGPGGQ 381

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H NTT+SAVRI HIPTGV   CQ ERSQH NKA A  +L+++L +LE+ ++ ++      
Sbjct: 382 HANTTESAVRIVHIPTGVTATCQNERSQHMNKASAMAVLQSRLDQLEMARQAQMNAQHTQ 441

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           S TEI WG QIR+YVL PY+MVKDLRTN E + P  VL+G++D F+ + L+ 
Sbjct: 442 SLTEISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGEIDGFILSYLSA 493


>gi|222475212|ref|YP_002563628.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str.
           Florida]
 gi|255003190|ref|ZP_05278154.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str.
           Puerto Rico]
 gi|222419349|gb|ACM49372.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str.
           Florida]
          Length = 338

 Score =  253 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 170/332 (51%), Positives = 226/332 (68%), Gaps = 2/332 (0%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             L+++     LW +   AK L+ ER  ++  ++  + ++    + + LL++A E D   
Sbjct: 2   EELDSRCSSASLWDDQENAKKLLSERARVEEVLASFRALEKEYAECVELLDVADESDSEF 61

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
           +       L +++  V  K+ E + SGEAD +  +L +  GAGGTES DWA MLLRMY R
Sbjct: 62  LDG-LWSALTQLERRVSQKKAECMFSGEADGSGCFLVIRPGAGGTESNDWAAMLLRMYIR 120

Query: 144 WA-EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           WA     F TE ++  DGE AG+KS T+ I G  AYGW K E GVHRLVRISP+DS+SRR
Sbjct: 121 WAGTFHGFTTEIVDKIDGEAAGLKSVTVKISGNGAYGWAKTESGVHRLVRISPFDSSSRR 180

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSF+S+ V P+ DD I+IEI E D RIDTYRASGAGGQHVN T+SAVRITH+P+G+VVQ
Sbjct: 181 HTSFASVEVSPIADDKIDIEILEKDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVVQ 240

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
           CQ  RSQH+N+A+A+++LR++LYE+ELQ++E+       S+ +IGWG QIRSYV+ PY+M
Sbjct: 241 CQTSRSQHQNRAEAYSLLRSRLYEMELQEKEKKMAQEHDSRCDIGWGHQIRSYVMHPYRM 300

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           VKDLRT  E      VLDGDLD F+ A L  K
Sbjct: 301 VKDLRTGHETGDVDAVLDGDLDKFIAAALTYK 332


>gi|329946372|ref|ZP_08293939.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 170 str.
           F0386]
 gi|328527348|gb|EGF54346.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 170 str.
           F0386]
          Length = 373

 Score =  253 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 143/357 (40%), Positives = 212/357 (59%), Gaps = 4/357 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L      +  + D +    R++ L+ +   P LW +   A+++     H    +  ++ 
Sbjct: 11  RLRHTYASIAAVTDPEALRARIAELSEQASAPDLWDDPDSAQVVTSALSHAQADLKRVES 70

Query: 62  IQDRLCDNL---ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           + +R+ D      L      +D   IL E   +L  I  ++   +  +LLSGE D  DA 
Sbjct: 71  LGERIEDLEAMVELAGEEEGDDAAEILAEAESDLTAISKDLSDLEIRTLLSGEYDPRDAV 130

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ D+A MLLRMYTRWAE+ ++  + L     EEAG+KS T  +  P AY
Sbjct: 131 VTIRSGAGGVDAADFAEMLLRMYTRWAERHEYPVKVLNTSYAEEAGLKSVTFEVHAPYAY 190

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  I+I E+D RID +R+SG 
Sbjct: 191 GTLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHIDIPETDIRIDVFRSSGP 250

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +N+A A  +L+++L  L+ Q+ +     
Sbjct: 251 GGQSVNTTDSAVRITHLPTGLVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQQEEDAKKKE 310

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                 +  WG Q+RSYVL PYQMVKDLRT+ E  +P  V DGD+D F+ A +  +K
Sbjct: 311 LAGD-VKASWGDQMRSYVLNPYQMVKDLRTSFEVGNPDSVFDGDIDGFIDAGIRWRK 366


>gi|329896805|ref|ZP_08271721.1| peptide chain release factor 2 [gamma proteobacterium IMCC3088]
 gi|328921560|gb|EGG28940.1| peptide chain release factor 2 [gamma proteobacterium IMCC3088]
          Length = 321

 Score =  253 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 168/317 (52%), Positives = 224/317 (70%), Gaps = 1/317 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W +   A+ L +ER  L+  +  I+ + +   D   LL+L + E+D   L++    +Q++
Sbjct: 2   WDDPERAQALGKERAALEAIVVSIETLTEGANDTADLLDLVVAENDVDSLEDIKSEIQKL 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
              ++  +F  + SGE D N+AYL++ +G+GGTE+QDWA MLLRMY RW E + FKTE +
Sbjct: 62  LAILDELEFRRMFSGEVDENNAYLDIQSGSGGTEAQDWAEMLLRMYLRWGEAKGFKTELI 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E   GE AGIKSAT+   G  A+GWL+ E GVHRLVR SP+DS +RRHTSF+S++V P +
Sbjct: 122 ECSAGEVAGIKSATIKFDGDYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVSPEI 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD+IEIEI+ +D R+DTYRASGAGGQHVN TDSAVR+TH+PTGVVVQCQ ERSQH+N+  
Sbjct: 182 DDNIEIEINPADLRVDTYRASGAGGQHVNKTDSAVRLTHLPTGVVVQCQTERSQHQNRDN 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A  +LR KLYELE+ KR E     E SK +IGWG QIRSYVL     +KDLRT +E ++ 
Sbjct: 242 AMKLLRGKLYELEMLKRSEKQQALEDSKADIGWGSQIRSYVLD-QSRIKDLRTGVETSNT 300

Query: 336 SDVLDGDLDDFMKATLA 352
             VLDG +D F++A+L 
Sbjct: 301 QAVLDGAIDMFIQASLK 317


>gi|77164311|ref|YP_342836.1| peptide chain release factor 2 [Nitrosococcus oceani ATCC 19707]
 gi|254433270|ref|ZP_05046778.1| peptide chain release factor 2 [Nitrosococcus oceani AFC27]
 gi|76882625|gb|ABA57306.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrosococcus
           oceani ATCC 19707]
 gi|207089603|gb|EDZ66874.1| peptide chain release factor 2 [Nitrosococcus oceani AFC27]
          Length = 331

 Score =  252 bits (644), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 173/328 (52%), Positives = 228/328 (69%), Gaps = 1/328 (0%)

Query: 25  FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84
            ++ +   P +W     A+ L +ER  L + ++ + E+   +     L ELA+EE D   
Sbjct: 2   EVDRELAVPSVWDEPERAQQLGQERAQLQSVVAPLAELGGEIIQVRELFELAMEEGDEDT 61

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
            QE    L  ++  +   +F+ + +GE D N+AYL++ AG+GGTE+QDWANMLLRMY RW
Sbjct: 62  AQEIIAELDVVEQRLAKLEFQRMFAGEMDPNNAYLDIQAGSGGTEAQDWANMLLRMYLRW 121

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
            EK  FKTE  E+ +GE AGIKSA +  +G  A+GWL+ E GVHRLVR SP+DS +RRHT
Sbjct: 122 GEKHSFKTELTEVSEGEVAGIKSAAIRFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHT 181

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           SF+S++VYP VD+ I+IEI+ +D RIDTYRASGAGGQHVN TDSAVRITH+P+ +VVQCQ
Sbjct: 182 SFASVFVYPEVDERIDIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHLPSSLVVQCQ 241

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
            ERSQH+NKA A   LRAKLYELE++ R+      E +K +IGWG QIR+YVL     +K
Sbjct: 242 SERSQHQNKAHAMAQLRAKLYELEMRNRQAEKQAAEEAKADIGWGSQIRNYVLD-QSRIK 300

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           DLRT IE  +   VLDGDLD F++A+L 
Sbjct: 301 DLRTGIEVGNTQGVLDGDLDSFIEASLK 328


>gi|289525504|emb|CBJ14981.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
           Sweden2]
          Length = 368

 Score =  252 bits (644), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 159/342 (46%), Positives = 208/342 (60%), Gaps = 1/342 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
               D +     L  L  +      W +V  A  +      L   +S   E+++++    
Sbjct: 20  RRSLDPEGKENELKELEQQAVQDGFWDDVARAGKISERIARLKQQLSEFNELKNKVSTIQ 79

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             LE      D  + +E        + ++   +   LLSGE D N  +L ++AGAGGTES
Sbjct: 80  FFLEDEESSKDLEMQKELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTES 139

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DW  MLLRMY RWA    ++ E ++  DGE AGIK  TL + G  AYG+ K E GVHRL
Sbjct: 140 CDWVEMLLRMYMRWASSHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRL 199

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+DSN++RHTSF S+ V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAV
Sbjct: 200 VRISPFDSNAKRHTSFVSVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAV 259

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PTG+VV CQ ERSQ +N+    NMLRA++Y+  LQ+R E  NI   +K EI WG 
Sbjct: 260 RITHFPTGIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGS 319

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
           QIR+YV QPY +VKD+RT  E  +   ++DG+ LD F+KA L
Sbjct: 320 QIRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYL 361


>gi|224534879|ref|ZP_03675448.1| peptide chain release factor 2 [Borrelia spielmanii A14S]
 gi|224513819|gb|EEF84144.1| peptide chain release factor 2 [Borrelia spielmanii A14S]
          Length = 350

 Score =  252 bits (644), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 148/347 (42%), Positives = 216/347 (62%), Gaps = 4/347 (1%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG FD      ++     +    + W +  +A+ +++ ++ L N +    E+ +++ 
Sbjct: 5   KTFGGSFDKKEIQAKIEKYEKEINQKNFWNDPKKAQKVIKAQRILKNKVDPWVELINKIK 64

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   L       ++   +         ++ + +     S    E D+N A+L +H+GAGG
Sbjct: 65  DLDDL---CEIIENEKDINSLEIEFNVLEKQYKDLLTISYFKEELDANGAFLTIHSGAGG 121

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+
Sbjct: 122 TEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGI 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRL+RISP+D+  +RHTSF+S++V PV+D+ IEI I   D RIDTYRASGAGGQHVN T 
Sbjct: 181 HRLIRISPFDAAKKRHTSFASVFVDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHVNKTS 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     + +K EI 
Sbjct: 241 SAVRITHIETGIVTQSQSDRSQHKNKDMAMKVLKSRLYEYYKNKEDEKNKSKQDTKKEIS 300

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L  K
Sbjct: 301 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 347


>gi|158321505|ref|YP_001514012.1| peptide chain release factor 2 [Alkaliphilus oremlandii OhILAs]
 gi|158141704|gb|ABW20016.1| peptide chain release factor 2 [Alkaliphilus oremlandii OhILAs]
          Length = 340

 Score =  252 bits (644), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 151/329 (45%), Positives = 213/329 (64%), Gaps = 1/329 (0%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             L  K  +   W +   A+ ++++ +   + I    ++     D  +++    + D+  
Sbjct: 6   EELEYKMSEEDFWNDPENAQSVLKKAKGYRDTIEEYNQLHVDHEDLEMMISFIEDGDESF 65

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
                      ++  V   +  +LL GE D N+A + +HAG GG ++QDWA MLLRMYTR
Sbjct: 66  QKDLLKGLEA-LENRVREIKIATLLKGEYDKNNAIISIHAGTGGLDAQDWAKMLLRMYTR 124

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           WAE + +  + L+I    EAGIKS TLLI+G NAYG+LK E+GVHRLVRISP+DS+ +RH
Sbjct: 125 WAEDKGYGVKTLDILTDTEAGIKSVTLLIEGMNAYGYLKAEKGVHRLVRISPFDSSGKRH 184

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSF+S+ V P +DDS++I+I+ +D RIDTYRASG+GGQHVN TDSAVRITHIPTG+VVQC
Sbjct: 185 TSFASVDVMPEIDDSVDIQINPNDLRIDTYRASGSGGQHVNKTDSAVRITHIPTGIVVQC 244

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           Q ERSQH N+  A  ML +KL E++  +++E     +    +I WG QIRSYV  PY +V
Sbjct: 245 QNERSQHSNRETAMKMLISKLIEVKETEQKEKIEDLQGEYNQIAWGSQIRSYVFNPYNLV 304

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           KD RTN+E  +   V+DG++D+F+   L 
Sbjct: 305 KDHRTNVEMGNIQAVMDGEIDEFINGYLK 333


>gi|116072022|ref|ZP_01469290.1| peptide chain release factor 2 [Synechococcus sp. BL107]
 gi|116065645|gb|EAU71403.1| peptide chain release factor 2 [Synechococcus sp. BL107]
          Length = 356

 Score =  252 bits (644), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 145/343 (42%), Positives = 203/343 (59%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      R   L      P  W +   A+  MR    +   +  + + +  + D  
Sbjct: 3   RTVFDVPALNARQQDLEQLAAQPDFWNDQQNAQKQMRRLDEVKAQLKQLADWRSAIDDAK 62

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             LEL   E D  +L E    L  ++  ++  + E LLSGE D   A L ++AGAGGT++
Sbjct: 63  ATLELYELEADEDMLGEAQQGLTELRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDA 122

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRWAE    +    EI +GEEAGIKSAT+ ++G  AYG+L+ E+G HRL
Sbjct: 123 QDWAQMLLRMYTRWAEDHDMRVTIDEISEGEEAGIKSATIEVEGRYAYGYLRNEKGTHRL 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+++N +R TSF+ I V P +++ ++I+I + D  + T R+ GAGGQ+VN  ++AV
Sbjct: 183 VRISPFNANDKRQTSFAGIEVMPKLEEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI H+PTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R            E  WG 
Sbjct: 243 RIQHLPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QIR+YV  PYQMVKDLRT  E      V+DG LD F+ A+L  
Sbjct: 303 QIRNYVFHPYQMVKDLRTQEETNDVQAVMDGALDPFIDASLRQ 345


>gi|256424469|ref|YP_003125122.1| peptide chain release factor 2 [Chitinophaga pinensis DSM 2588]
 gi|256039377|gb|ACU62921.1| bacterial peptide chain release factor 2 (bRF- 2) [Chitinophaga
           pinensis DSM 2588]
          Length = 362

 Score =  252 bits (644), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 146/353 (41%), Positives = 228/353 (64%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +L+ LGG  D  + + ++      T  P  W +   A  +++E +     +   + +
Sbjct: 9   MRDRLHVLGGFLDVQDRIAKIENDKQLTLAPGFWDDNARATSILKEIKVNKFWVDLYENV 68

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           Q  + D+ +LL+   E +        + +       ++  +F+S L+   D   A L ++
Sbjct: 69  QTSIEDSAVLLDFQKEGEASEEEVAQAYHAAT--EALDELEFKSTLNEPEDEMPAVLTIN 126

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA MLLRMY  + EK+ +K   +++  G+ AGIKSA+L + G  AYG LK
Sbjct: 127 SGAGGTESQDWAEMLLRMYRMYGEKQGWKVSEIDVQYGDGAGIKSASLEMDGSFAYGLLK 186

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N+RRHTSF+SI+VYP+VDD+IEI ++ +D   + YR+ G GGQ+
Sbjct: 187 AESGVHRLVRISPFDANARRHTSFASIFVYPLVDDTIEIAVNPADLVWEFYRSGGKGGQN 246

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++AVR+ H+P+G++++CQQ R+Q +N+ +A  ML+++LYE EL+KREE+ N   ++
Sbjct: 247 VNKVETAVRLKHVPSGIIIECQQARTQGENREKALTMLKSRLYEEELRKREELKNAANAN 306

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K +I WG QIRSYV  PY+M+KD RT+ E  +   V+DG+L+ F+KA L + K
Sbjct: 307 KRKIEWGSQIRSYVFHPYKMIKDHRTDYEVGNVQPVMDGELEGFIKAYLMMSK 359


>gi|125543555|gb|EAY89694.1| hypothetical protein OsI_11230 [Oryza sativa Indica Group]
          Length = 468

 Score =  252 bits (644), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 156/351 (44%), Positives = 222/351 (63%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +++ +  +     W   ++R   L+   E P LW + + A  + RE   L   I  + + 
Sbjct: 111 VAQSVKLIKKRLKWGWILERSRQLSVVLERPDLWDDPVFAGKVSREHGELMGKIKSVNQF 170

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L +++ +L LA EEDD  +  ET   L  ++   + K+  +LLSG+ DS   ++EV 
Sbjct: 171 EQELMEHIDMLRLAREEDDNELETETMRALAEMRRSAKEKELNALLSGDNDSCSCFIEVQ 230

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA M++ MY+ WA++R +    +E   GE AGIK AT+ + G  A+G+ K
Sbjct: 231 AGAGGTESMDWAAMVMNMYSSWAQRRGYTVSIIEEMPGEIAGIKRATIKVDGEYAFGYAK 290

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+DS  RRHTSF+++ V P+  D S   +I +SD RI+ +R+ G GGQ
Sbjct: 291 AEVGVHRLVRISPFDSGKRRHTSFAAVAVVPILGDGSTRYQIKDSDLRIERFRSGGPGGQ 350

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H N T+SAVRI HIPTG+   CQ ERSQH NKA A  +L+++L +LE+ ++ ++      
Sbjct: 351 HANCTESAVRIVHIPTGITATCQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNADHTQ 410

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           S +EI WG QIRSYVL PY+MVKDLRTN E + P  VL+GDLDDF+   L+
Sbjct: 411 SLSEISWGNQIRSYVLHPYRMVKDLRTNYEVSDPDSVLNGDLDDFILNFLS 461


>gi|115452569|ref|NP_001049885.1| Os03g0305700 [Oryza sativa Japonica Group]
 gi|108707729|gb|ABF95524.1| peptide chain release factor 2 family protein, expressed [Oryza
           sativa Japonica Group]
 gi|113548356|dbj|BAF11799.1| Os03g0305700 [Oryza sativa Japonica Group]
 gi|215707188|dbj|BAG93648.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 468

 Score =  252 bits (644), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 156/351 (44%), Positives = 222/351 (63%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +++ +  +     W   ++R   L+   E P LW + + A  + RE   L   I  + + 
Sbjct: 111 VAQSVKLIKKRLKWGWILERSRQLSVVLERPDLWDDPVFAGKVSREHGELMGKIKSVNQF 170

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L +++ +L LA EEDD  +  ET   L  ++   + K+  +LLSG+ DS   ++EV 
Sbjct: 171 EQELMEHIDMLRLAREEDDNELETETMRALAEMRRSAKEKELNALLSGDNDSCSCFIEVQ 230

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA M++ MY+ WA++R +    +E   GE AGIK AT+ + G  A+G+ K
Sbjct: 231 AGAGGTESMDWAAMVMNMYSSWAQRRGYTVSIIEEMPGEIAGIKRATIKVDGEYAFGYAK 290

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+DS  RRHTSF+++ V P+  D S   +I +SD RI+ +R+ G GGQ
Sbjct: 291 AEVGVHRLVRISPFDSGKRRHTSFAAVAVVPILGDGSTRYQIKDSDLRIERFRSGGPGGQ 350

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H N T+SAVRI HIPTG+   CQ ERSQH NKA A  +L+++L +LE+ ++ ++      
Sbjct: 351 HANCTESAVRIVHIPTGITATCQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNADHTQ 410

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           S +EI WG QIRSYVL PY+MVKDLRTN E + P  VL+GDLDDF+   L+
Sbjct: 411 SLSEISWGNQIRSYVLHPYRMVKDLRTNYEVSDPDSVLNGDLDDFILNFLS 461


>gi|21909990|ref|NP_664258.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS315]
 gi|21904179|gb|AAM79061.1| putative peptide chain release factor 2 [Streptococcus pyogenes
           MGAS315]
          Length = 326

 Score =  252 bits (644), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 147/325 (45%), Positives = 208/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L         +Q+   +  +LLE+   ++D  + +E  
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEM--LDEDDFLKEELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +NL ++       +   LLS   D N+A LE+H G+GGTE+QDW ++LLRMYTR+     
Sbjct: 59  ENLMQLDKITGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRMYTRFGNANG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  PY MVKD RTN
Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DG+++ F+ A L  +
Sbjct: 299 FELAQVDKVMDGEINGFIDAYLKWR 323


>gi|332671116|ref|YP_004454124.1| peptide chain release factor 2 [Cellulomonas fimi ATCC 484]
 gi|332340154|gb|AEE46737.1| peptide chain release factor 2 [Cellulomonas fimi ATCC 484]
          Length = 382

 Score =  252 bits (644), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 142/354 (40%), Positives = 216/354 (61%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D      +++ L+ +   P+LW +   A+ +          +  + +
Sbjct: 24  ELRTTLESIQAVSDPTALKAKIALLSEQASVPNLWDDPDAAQKVTSALSATQAELDRVAK 83

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  R+ D   L+EL +E +D   L E    L  I+ ++   +  +LL+GE D  +A + +
Sbjct: 84  LGGRIDDLETLVELGVEMEDEDSLAEAEVELTGIRKDLGELEVRTLLNGEYDQREAVVTI 143

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY RWAE+  + T  L+    EEAG+KSAT  +K P A+G L
Sbjct: 144 RSGAGGVDAADFAEMLLRMYLRWAERHGYPTTVLDTSYAEEAGLKSATFEVKAPYAFGHL 203

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI ES+ ++D +R+SG GGQ
Sbjct: 204 SVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDSIEIPESEIKVDVFRSSGPGGQ 263

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  +   + +        
Sbjct: 264 SVNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLVRKAEEDAKKKELAG 323

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +  WG Q+RSYVLQPYQMVKDLRT  E  +PS V DGD+DDF++A +  ++
Sbjct: 324 D-IKASWGDQMRSYVLQPYQMVKDLRTEHEVGNPSAVFDGDIDDFIEAGIRWRR 376


>gi|66044558|ref|YP_234399.1| peptide chain release factor 2 [Pseudomonas syringae pv. syringae
           B728a]
 gi|63255265|gb|AAY36361.1| Peptide chain release factor 2 [Pseudomonas syringae pv. syringae
           B728a]
          Length = 329

 Score =  252 bits (644), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 175/327 (53%), Positives = 235/327 (71%), Gaps = 1/327 (0%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
           N + EDP++W N   A+ L RER  L   +  + E+   L D   LL ++ EE+D + + 
Sbjct: 2   NRELEDPNVWNNPAYAQELGRERSLLAQIVETLDEMSSGLADAKDLLLMSAEEEDQAAVD 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           + +  ++R++  +E  +F  + SG+ D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+
Sbjct: 62  DVAAEVERLRESLEKLEFRRMFSGDMDPNNAYLDIQAGSGGTEAQDWANILLRMYLRWAD 121

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           KR F    +E+  GE AGIK AT+ IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSF
Sbjct: 122 KRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSF 181

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           S+++V P +DD+IEI+I+ +D RIDTYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ E
Sbjct: 182 SAVFVSPEIDDNIEIDINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVSCQNE 241

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQH NK  A  MLRA+LYE E+QKR   +   E +K++IGWG QIRSYVL     +KDL
Sbjct: 242 RSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTKSDIGWGHQIRSYVLD-ASRIKDL 300

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAI 353
           RTNIE++    VLDGD+D+++ A+L  
Sbjct: 301 RTNIERSDCDKVLDGDIDEYLIASLKQ 327


>gi|88607992|ref|YP_506484.1| peptide chain release factor 2, programmed frameshift
           [Neorickettsia sennetsu str. Miyayama]
 gi|123491729|sp|Q2GDG2|RF2_NEOSM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|88600161|gb|ABD45629.1| peptide chain release factor 2, programmed frameshift
           [Neorickettsia sennetsu str. Miyayama]
          Length = 365

 Score =  252 bits (643), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 172/351 (49%), Positives = 244/351 (69%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L + +  +    D +    RL  +    + P LW++   A++L++E+  ++ ++   KE+
Sbjct: 12  LKKSVEVIRRQLDIEKKHSRLEEIQALVDSPTLWEDQSRAQLLLKEKSQIETSLKEFKEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             +L D + ++ELA ++ +   +++    L  +K +++ K+ E L SGEAD ND  LE+ 
Sbjct: 72  SIQLDDLIEMIELASKDHEEETMKDLERELLLLKEKIQKKEIECLFSGEADGNDCLLEIQ 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +GAGGTES DWA MLLRMYTRWAE   KF+ + ++  +GEE GIKS TL + G NAYGW 
Sbjct: 132 SGAGGTESNDWAMMLLRMYTRWAEIYHKFQVQIVDKVEGEETGIKSCTLKVMGKNAYGWA 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVRISP+D+N++RHTSF+ I+V P ++  I I I E D +IDTYRASGAGGQ
Sbjct: 192 RTETGVHRLVRISPFDANAKRHTSFAKIFVSPCIEGEINISIDEKDLKIDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SA+RITH+P+ +VVQ Q  RSQH+NKA+A  ML+++LYE+EL+K+EE  N   +
Sbjct: 252 HVNKTESAIRITHLPSKIVVQSQSSRSQHQNKAEAMQMLKSRLYEIELRKKEEKLNAARN 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +  IGWG QIRSYVL PYQM+KDLRT  E  + + VLDGDLD F+ AT++
Sbjct: 312 VEDSIGWGYQIRSYVLHPYQMIKDLRTGHEVGNITSVLDGDLDSFIIATIS 362


>gi|139438906|ref|ZP_01772366.1| Hypothetical protein COLAER_01370 [Collinsella aerofaciens ATCC
           25986]
 gi|133775617|gb|EBA39437.1| Hypothetical protein COLAER_01370 [Collinsella aerofaciens ATCC
           25986]
          Length = 382

 Score =  252 bits (643), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 145/355 (40%), Positives = 205/355 (57%), Gaps = 5/355 (1%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           + +L  +      D    R+S L  K+  P  W +   A+  M E       I+ +   +
Sbjct: 16  ADRLGEVESYLHLDEKRTRVSELEAKSVAPGFWDDADAARATMEEIARTKEDIAAVDTAR 75

Query: 64  DRLCD----NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
             L D      +  E+  + D  ++ +E +   +R+   ++  +  S  +GE D  DA +
Sbjct: 76  GELSDARAALELAEEMGDDPDAAALREEAAATAERLARAIDELELSSWFTGEFDHGDAIV 135

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            +  G GG E+QDW  ML +MY ++ ++R +K    +    E  GI  AT  ++G +A+G
Sbjct: 136 TIKPGQGGLEAQDWTFMLFKMYMKYCQRRGWKVTINDCPAAEVIGIDRATFTVEGKDAFG 195

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L+ E GVHRLVRISP D   RR T+F+ + V PV+ D I+IEIS  D R+D Y ASG G
Sbjct: 196 MLRAEAGVHRLVRISPTDDKRRRQTTFAGVEVIPVLPDDIDIEISPDDIRVDVYHASGPG 255

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+TH P+G+VV CQ ERSQ +NKA    +L+A+LYE+EL+KR E  +  
Sbjct: 256 GQGVNTTDSAVRVTHFPSGIVVTCQNERSQIQNKAACMQILKARLYEIELEKRAEALDEI 315

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAI 353
              KT IG+G QIRSYVL PYQMVKDLR+ +E ++   VL DGDLD F+      
Sbjct: 316 RGPKTTIGFGNQIRSYVLYPYQMVKDLRSGVETSNVEAVLDDGDLDPFVIGYHRW 370


>gi|313889933|ref|ZP_07823573.1| peptide chain release factor 2 [Streptococcus pseudoporcinus SPIN
           20026]
 gi|313121699|gb|EFR44798.1| peptide chain release factor 2 [Streptococcus pseudoporcinus SPIN
           20026]
          Length = 327

 Score =  252 bits (643), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 149/325 (45%), Positives = 208/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L         +++   +    L + + E+D S+  E  
Sbjct: 1   MTEPDFWNDTIAAQKTSQELNELKVKFDTFHNMENLSEETE--LYMEMLEEDESVKGELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           ++L ++   +   +   LLS   D N+A LE+H G+GGTE+QDWA+ML RMYTR+   + 
Sbjct: 59  ESLLKLDQILAAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E  K+ E  N  +  K EI WG QIRSYV  PY MVKD RTN
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQDKKAEEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGD+D F+ A L  +
Sbjct: 299 FEVAQVDKVMDGDIDGFIDAYLKWR 323


>gi|311743767|ref|ZP_07717573.1| peptide chain release factor RF2 [Aeromicrobium marinum DSM 15272]
 gi|311312897|gb|EFQ82808.1| peptide chain release factor RF2 [Aeromicrobium marinum DSM 15272]
          Length = 371

 Score =  252 bits (643), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 148/353 (41%), Positives = 216/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L + L  +  + D D   + ++ L  +   P LW +   A+ +      L   +  +  +
Sbjct: 13  LDQTLTSVEKVLDLDAMRKEIAELQEQVGAPDLWDDQANAQRVTGRLSVLQAEVDKVTGL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L E+ALEE D + + + +  L R+   +E  +  +LLSGE D  DA + + 
Sbjct: 73  RQRLDDLELLHEMALEEGDDASVADAAAELVRVHKSIEALEVRTLLSGEYDMRDALVSIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ D+A ML RMY RWAE+  +  E  ++   EEAG+KS T  +K P AYG L 
Sbjct: 133 SGAGGVDAADFALMLQRMYIRWAERHGYTVEIYDVSYAEEAGLKSTTFAVKAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF++I V PV++ + EI++ + + R+D YR+SG GGQ 
Sbjct: 193 VESGTHRLVRISPFDNQGRRQTSFAAIEVVPVLEQTDEIDVPDEEIRVDVYRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG VV CQ E+SQ +NKA A  +L+AKL  L+  +     +     
Sbjct: 253 VNTTDSAVRLTHIPTGTVVSCQNEKSQLQNKASAMVILKAKLLALKKAEERAHLDELRGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +  WG Q+R+YVL PYQMVKDLRT  E  +   VLDG++DDF++A +  ++
Sbjct: 313 -VQASWGDQMRNYVLNPYQMVKDLRTEHESGNTQGVLDGEIDDFIEAGIRWRR 364


>gi|331089985|ref|ZP_08338875.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|330402899|gb|EGG82465.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 332

 Score =  252 bits (643), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 152/324 (46%), Positives = 224/324 (69%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E+P  W +   ++ +M+E + L +++  I+++     D ++L+E++ EED     +E  
Sbjct: 1   MEEPGFWDDPEVSQQVMKELKGLQDSVKEIEKLYSDYEDMMLLIEMSEEEDSEETAEEIE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + LQ+ +   E  +  +LL+G  D ++A + +HAGAGGTES DW  ML RMYTRWAEK+ 
Sbjct: 61  EELQQFEETFEELRIGTLLTGPYDRDNAIVTLHAGAGGTESCDWTGMLYRMYTRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  E L+  +G+ AG+K  T  +KG NAYG+L+ E+GVHRLVRISP++S  +R TSF+S 
Sbjct: 121 YSIEELDYLEGDVAGVKGVTFEVKGENAYGYLRSEKGVHRLVRISPFNSAGKRQTSFASC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ I+IEI++ D +IDTYR+SGAGGQH+N T SAVRITH+PTG+VVQCQ ERSQ
Sbjct: 181 DVIPDIEEDIDIEINDDDLKIDTYRSSGAGGQHINKTSSAVRITHLPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK +A  ML++KLY ++ Q++ E  +       +I +G QIRSYV+QPY MVKD RTN
Sbjct: 241 HMNKDKAMQMLKSKLYLMKQQEQAEKMSDIRGEVRDINFGNQIRSYVMQPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E ++   V+DG++D F+ A L+ 
Sbjct: 301 AEVSNVGGVMDGNIDPFINAYLSA 324


>gi|317153200|ref|YP_004121248.1| peptide chain release factor 2 [Desulfovibrio aespoeensis Aspo-2]
 gi|316943451|gb|ADU62502.1| peptide chain release factor 2 [Desulfovibrio aespoeensis Aspo-2]
          Length = 391

 Score =  252 bits (643), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 164/342 (47%), Positives = 215/342 (62%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            GG FD+     RL  +  +   P  W        L+RE+  L + ++  + +     D 
Sbjct: 40  FGGGFDYAETKTRLEAIEHQLSKPGAWDKPGALTPLLREKTQLSDKLAMYESLAQAKDDL 99

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              LELA E  D   +      +   K  +   +  ++ + E D  +A LE+H GAGG E
Sbjct: 100 DAWLELAHESRDEEAMAGLDGQISVFKERLGITELATMFAFEHDKGNAILEIHPGAGGVE 159

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           SQDWA MLLRMYTR+AE++ FK   L+   GEEAGIKS TL I+G  +YG LKGE GVHR
Sbjct: 160 SQDWAEMLLRMYTRFAERKGFKITQLDYQVGEEAGIKSVTLQIEGLYSYGLLKGESGVHR 219

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           L+RISP+DS+ RRHTSF+S+ VYP +DD IEIE+ + D RID +R+SG GGQ VN T SA
Sbjct: 220 LIRISPFDSSGRRHTSFASVDVYPDMDDDIEIEVRDEDLRIDVFRSSGPGGQSVNKTSSA 279

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+V QCQ E+SQH+NKA A  +++A+LYE ELQK EE       +K  I WG
Sbjct: 280 VRITHLPTGIVAQCQNEKSQHRNKATALRLVKARLYERELQKIEESRRQDYQAKGAIAWG 339

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIR+Y LQPY++VKD R+N E  +    LDGDLD  ++  L
Sbjct: 340 SQIRTYTLQPYRLVKDHRSNSETGNVDAFLDGDLDAMIRNHL 381


>gi|145225030|ref|YP_001135708.1| peptide chain release factor 2 [Mycobacterium gilvum PYR-GCK]
 gi|189040001|sp|A4TDE5|RF2_MYCGI RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|145217516|gb|ABP46920.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium
           gilvum PYR-GCK]
          Length = 372

 Score =  252 bits (643), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 160/357 (44%), Positives = 221/357 (61%), Gaps = 8/357 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + + D    R+  L +   DP LW +   A+ +  +  H  N +  ++E+
Sbjct: 12  LDTTLTTVERVVNVDGLRGRIQQLESDASDPKLWDDQARAQKVTSDLSHAQNELRRVEEL 71

Query: 63  QDRLCDNLILLELALEED---DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + RL D  +L ELA EE+         E    L +++ ++   +  +LLSGE D  +A +
Sbjct: 72  RSRLDDLPVLYELAAEEEGAGSSEAFAEADAELAKLREDIAGMEVRTLLSGEYDEREALV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+  +  E  +    EEAGIKSAT  +  P AYG
Sbjct: 132 NIRSGAGGVDAADWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG G
Sbjct: 192 NLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL E   +KR E     
Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLE---RKRLEERAEM 308

Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           ++ K + G  WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +  +
Sbjct: 309 DALKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWR 365


>gi|163840102|ref|YP_001624507.1| peptide chain release factor 2 [Renibacterium salmoninarum ATCC
           33209]
 gi|229470354|sp|A9WPT6|RF2_RENSM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|162953578|gb|ABY23093.1| peptide chain release factor 2 [Renibacterium salmoninarum ATCC
           33209]
          Length = 374

 Score =  252 bits (643), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 146/352 (41%), Positives = 219/352 (62%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L    + +  + D D+  + ++ L+ +   P LW N  EA+ +  +  H  + +  ++ +
Sbjct: 16  LRATYDSIERVIDADSLRKDIAVLSEQAGVPDLWDNPAEAQKVTSKLSHAQSKLERLETL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             R+ D  +L+ELA  E D   L E S  L  ++  ++  +  +LL+GE D  +A + + 
Sbjct: 76  TARIDDLEVLVELAESEHDEDSLAEASKELVSLQKSLQELEVVTLLAGEYDEREAVVTIR 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ D+A MLLRMY RWAE+  + T  L+    EEAG+KSAT  +K P A+G L 
Sbjct: 136 SGAGGVDAADFAEMLLRMYLRWAERHGYPTSVLDTSYAEEAGLKSATFEVKAPYAFGTLS 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI ++D R+D +R+SG GGQ 
Sbjct: 196 VEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDSIEIPDNDIRVDVFRSSGPGGQS 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG VV  Q E+SQ +N+A A  +L+++L  L+ Q+ +         
Sbjct: 256 VNTTDSAVRLTHLPTGTVVSMQNEKSQLQNRAAATRVLQSRLLLLKKQQEDAEKKALAGD 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  WG Q+RSYVL PYQMVKDLRT  E  + S VLDGD+DDF+ A +  +
Sbjct: 316 -VKASWGDQMRSYVLNPYQMVKDLRTEHEVGNTSGVLDGDIDDFIDAGIRWR 366


>gi|323486370|ref|ZP_08091695.1| hypothetical protein HMPREF9474_03446 [Clostridium symbiosum
           WAL-14163]
 gi|323695006|ref|ZP_08109153.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673]
 gi|323400352|gb|EGA92725.1| hypothetical protein HMPREF9474_03446 [Clostridium symbiosum
           WAL-14163]
 gi|323500950|gb|EGB16865.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673]
          Length = 335

 Score =  252 bits (643), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 154/324 (47%), Positives = 224/324 (69%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E+P  W +   +   +RE ++L + +   + ++ +  D  I++E+  EE+D S++ E  
Sbjct: 1   MEEPGFWDDPERSTKTVREAKNLKDTVETYRHLEQQYEDIQIMIEMGYEENDPSMIPEIQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L      +E  + ++LLSGE D+ +A L+++AGAGGTE+ DW +ML RMY RWA+K+ 
Sbjct: 61  EMLDEFINSLEDIRTKTLLSGEYDNCNAILKLNAGAGGTEAMDWCSMLYRMYQRWADKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           + TE L+  DG+EAGIKS T+ I G NA+G+LK E+GVHRLVRISP+++  +R TSF S 
Sbjct: 121 YTTEVLDFLDGDEAGIKSITVQINGENAFGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ ++IE+++ D RIDTYR+SGAGGQH+N T SA+RITHIPTG+VVQCQ ERSQ
Sbjct: 181 DVMPDIEEDLDIEVNQDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK +A  ML+AKLY L+ Q+  E  +       +I +G QIRSYV+QPY +VKD RTN
Sbjct: 241 FQNKDKAMQMLKAKLYLLKQQENAEKLSDIRGDVKDINFGNQIRSYVMQPYTLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  + + V+DGD+D F+ A L  
Sbjct: 301 AENGNVNAVMDGDIDLFISAYLKW 324


>gi|227505562|ref|ZP_03935611.1| peptide chain release factor 2 [Corynebacterium striatum ATCC 6940]
 gi|227197859|gb|EEI77907.1| peptide chain release factor 2 [Corynebacterium striatum ATCC 6940]
          Length = 370

 Score =  252 bits (643), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 149/353 (42%), Positives = 211/353 (59%), Gaps = 4/353 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D     +++  L  +  DP LW +   A+ +          I  ++ 
Sbjct: 11  ELDSTLATIEKVMDPAALAEQVRELEAQAGDPSLWDDPAHAQQVTSALSAAQAKIRKLES 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ R+ D   +  +    ++        D L+ +   +E  +  ++LSGE D  +A + +
Sbjct: 71  LRSRVDD---MPVMFELAEEEGDTALADDELEDLGAAIEALEVTTMLSGEYDPREAVINI 127

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMYTRWAEK   K +  +I   EEAGIKSAT ++ G   YG L
Sbjct: 128 RSGAGGVDAADWAEMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  I++ + D R+D YR+SG GGQ
Sbjct: 188 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDHIDVPDGDVRVDVYRSSGPGGQ 247

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E + Q+     +   +
Sbjct: 248 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAELDALGA 307

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                 WG Q+RSYVL PYQMVKDLRTN E   PS VLDGDLD F++A +  +
Sbjct: 308 G-GNASWGNQMRSYVLHPYQMVKDLRTNYEVGDPSKVLDGDLDGFLEAGIRWR 359


>gi|76798117|ref|ZP_00780371.1| peptide chain release factor 2 [Streptococcus agalactiae 18RS21]
 gi|77405443|ref|ZP_00782536.1| peptide chain release factor 2 [Streptococcus agalactiae H36B]
 gi|77408934|ref|ZP_00785658.1| peptide chain release factor 2 [Streptococcus agalactiae COH1]
 gi|77411593|ref|ZP_00787935.1| peptide chain release factor 2 [Streptococcus agalactiae CJB111]
 gi|209559087|ref|YP_002285559.1| peptide chain release factor 2 [Streptococcus pyogenes NZ131]
 gi|76586525|gb|EAO63029.1| peptide chain release factor 2 [Streptococcus agalactiae 18RS21]
 gi|77162378|gb|EAO73347.1| peptide chain release factor 2 [Streptococcus agalactiae CJB111]
 gi|77172476|gb|EAO75621.1| peptide chain release factor 2 [Streptococcus agalactiae COH1]
 gi|77175936|gb|EAO78712.1| peptide chain release factor 2 [Streptococcus agalactiae H36B]
 gi|209540288|gb|ACI60864.1| Peptide chain release factor 2 [Streptococcus pyogenes NZ131]
          Length = 326

 Score =  252 bits (643), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 148/325 (45%), Positives = 210/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L         +Q+   +  +LLE+   ++D S+ +E  
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEM--LDEDDSLKEELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +NL ++   +   +   LLS   D N+A LE+H G+GGTE+QDW ++LLRMYTR+     
Sbjct: 59  ENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRMYTRFGNANG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  PY MVKD RTN
Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DG+++ F+ A L  +
Sbjct: 299 FELAQVDKVMDGEINGFIDAYLKWR 323


>gi|154496274|ref|ZP_02034970.1| hypothetical protein BACCAP_00559 [Bacteroides capillosus ATCC
           29799]
 gi|150274357|gb|EDN01434.1| hypothetical protein BACCAP_00559 [Bacteroides capillosus ATCC
           29799]
          Length = 373

 Score =  252 bits (643), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 152/352 (43%), Positives = 227/352 (64%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L+ LG     + A + L  L +++     W N+ +A+ + +  + L + +   K+ 
Sbjct: 14  LKPELDELGQALGLEAAERELEMLESESASDGFWNNLEKAQKIQQRIKQLHHKVDGQKKR 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
                D L L E+  EE+D S++ E  +   ++   +E  +  +L +GE D N+  L +H
Sbjct: 74  LGEWEDLLTLCEMGNEEEDESLVPELEEGFNKLTANMEEARLSTLFTGEYDDNNVVLAIH 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA MLLRMYTRWAE+  F+ + ++  DG+EAGIKSAT++I+G NAYG L+
Sbjct: 134 AGAGGTEAQDWAQMLLRMYTRWAERHDFEYQVVDFQDGDEAGIKSATVMIQGENAYGHLR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR+SP+D+N+RR TSF+++ V P + +  ++EI   +  +  +R+SGAGGQH
Sbjct: 194 SEHGVHRLVRVSPFDANARRQTSFAAVEVMPDLPEDADVEIRPEEYEMQVFRSSGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T SAVR+ H  TG+VV CQ ERSQ +NK     MLRAKL EL++Q+  E  +  +  
Sbjct: 254 INKTSSAVRLIHHATGIVVSCQTERSQFQNKDTCLRMLRAKLVELKMQQHAEKLSDIKGV 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + +I WG QIRSYV  PYQ+VKD R+  E ++ + V+DGD+D F+ A L  +
Sbjct: 314 QLKIEWGSQIRSYVFMPYQLVKDNRSGFETSNVNGVMDGDIDGFINAYLKCE 365


>gi|237802887|ref|YP_002888081.1| peptide chain release factor 2 [Chlamydia trachomatis B/Jali20/OT]
 gi|237804809|ref|YP_002888963.1| peptide chain release factor 2 [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231273109|emb|CAX10022.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
           B/TZ1A828/OT]
 gi|231274121|emb|CAX10915.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
           B/Jali20/OT]
          Length = 368

 Score =  252 bits (642), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 159/342 (46%), Positives = 210/342 (61%), Gaps = 1/342 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
               D +     L  L  +      W +V+ A  +      L   +S   E+++++    
Sbjct: 20  RRSLDPEGKENELKELEQQAVQDGFWDDVVRAGKISERIARLKQQLSEFNELKNKVSAIQ 79

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             LE      D  + +E        + ++   +   LLSGE D N  +L ++AGAGGTES
Sbjct: 80  FFLEDEESSKDLEMQKELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTES 139

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DW  MLLRMY RWA    ++ E ++  DGE AGIK  TL + G  AYG+ K E GVHRL
Sbjct: 140 CDWVEMLLRMYMRWASSHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRL 199

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+DSN++RHTSF+S+ V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAV
Sbjct: 200 VRISPFDSNAKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAV 259

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PTG+VV CQ ERSQ +N+    NMLRA++Y+  LQ+R E  NI   +K EI WG 
Sbjct: 260 RITHFPTGIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGS 319

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
           QIR+YV QPY +VKD+RT  E  +   ++DG+ LD F+KA L
Sbjct: 320 QIRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYL 361


>gi|170782441|ref|YP_001710774.1| chain release factor 2 [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169157010|emb|CAQ02182.1| chain release factor 2 [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 367

 Score =  252 bits (642), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 146/354 (41%), Positives = 218/354 (61%), Gaps = 3/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L    + +  +   +   Q +  L+ +  +P LW +  +A+ +  +  H  + +  I E
Sbjct: 12  ELRDTYSNIRSVIGVERLQQEVEELSAQAGEPDLWDDTEKAQKVTSDLSHRQSELKRIDE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +Q RL D  +L+E+A   DD    +E    L  I   ++  + ++LL+GE D   A + +
Sbjct: 72  LQRRLDDLDVLVEMAK--DDEESAEEAVVELAGITKIMDELEVQTLLNGEFDPRPAVVTI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG ++ D+A ML+RMY RWAE+  +    L+    EEAGIKSAT  I  P A+G L
Sbjct: 130 RAGAGGVDAADFAEMLMRMYLRWAEQHDYSATVLDTSYAEEAGIKSATFEIDAPYAFGTL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVR+SP++S  +R TSF+++ V P+++ +  IEI E+D R+D +R+SG GGQ
Sbjct: 190 SVEAGTHRLVRMSPFNSAGKRQTSFAAVEVVPLIEQTESIEIPENDMRVDVFRSSGPGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTG+VV CQ E+SQ +N+A A  +L+++L  ++ ++          
Sbjct: 250 SVNTTDSAVRITHLPTGIVVTCQNEKSQIQNRAAALRVLQSRLLLVQREQEAATKKELAG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           + T   WG Q+RSYVL PYQMVKDLRT  E  +PS+V DGDLD F+ A +  +K
Sbjct: 310 NIT-ASWGDQMRSYVLAPYQMVKDLRTEHEVNNPSNVFDGDLDGFISAGIRWRK 362


>gi|269218746|ref|ZP_06162600.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 848 str.
           F0332]
 gi|269211857|gb|EEZ78197.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 848 str.
           F0332]
          Length = 378

 Score =  252 bits (642), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 137/358 (38%), Positives = 208/358 (58%), Gaps = 7/358 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L +    +  + + +   +R++ L   +  P LW +  +A+ +  +  H    +  I  +
Sbjct: 12  LRKTFQQISSVSNPEGLRERIAELTEASAAPDLWDDQDKAQSVTSKLSHAQAELDKINAM 71

Query: 63  QDRLCDNLILLELALEEDDCSI------LQETSDNLQRIKLEVEYKQFESLLSGEADSND 116
              L D   L E+A EE             +    L ++  ++   +  +LLSG+ D  +
Sbjct: 72  SAALDDLETLKEMADEEAGSDPETAAELYSDLERELGQVGADMSELEIRTLLSGKYDERE 131

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
           A + + +GAGG ++ D+A +L RMY RWAE+R +  + L+    EEAGIKS T  +  P 
Sbjct: 132 AVVTIRSGAGGVDAADFAQILQRMYLRWAERRGYSAKVLDTSYAEEAGIKSTTFEVSAPY 191

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           AYG L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  I++ E+D R+D +R+S
Sbjct: 192 AYGTLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDHIDVPEADIRVDVFRSS 251

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ VNTTDSAVRITHIPTG+VV  Q E+SQ +N+A A  +L+++L  L+ ++     
Sbjct: 252 GPGGQSVNTTDSAVRITHIPTGIVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQEEEAREK 311

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                   +  WG Q+RSYVLQPYQMVKDLRT  E  +P  V DGD+D F+ A +  +
Sbjct: 312 KELAGD-IKASWGDQMRSYVLQPYQMVKDLRTGYEAGNPEAVFDGDIDGFIDAGIRWR 368


>gi|229815728|ref|ZP_04446053.1| hypothetical protein COLINT_02777 [Collinsella intestinalis DSM
           13280]
 gi|229808644|gb|EEP44421.1| hypothetical protein COLINT_02777 [Collinsella intestinalis DSM
           13280]
          Length = 377

 Score =  252 bits (642), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 149/355 (41%), Positives = 204/355 (57%), Gaps = 4/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L  +      D A  R+  L   +  P  W +   A+  M E   +   ++ +   
Sbjct: 17  LEARLTEVEAYLHIDEARGRVGELEQASAAPGFWDDADAARAHMAELAQVKGDVALVDGA 76

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYL 119
           ++RL D    LELA E  +    +  ++  +            +  S  +GE D   A L
Sbjct: 77  RERLSDARAALELAEEMGEEGGAEFVAEATEAAAELTHSIDEMELSSWFTGEFDHGSAIL 136

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            +  G GG E+QDW  ML +MY ++  +R +K    +    E  GI  AT+ ++G +A+G
Sbjct: 137 SIKPGQGGLEAQDWTFMLFKMYMKYCARRGWKVTVNDCPAAEVIGIDRATITVEGKDAFG 196

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L+ E GVHRLVRISP D+  RR T+F+ + V PV+ D I+IE++  D R+D Y ASG G
Sbjct: 197 MLRAEAGVHRLVRISPTDAKKRRQTTFAGVEVIPVLPDDIQIEVAPDDIRVDVYHASGPG 256

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA    +L+A+LYELELQKRE+  +  
Sbjct: 257 GQGVNTTDSAVRVTHIPTGIVVTCQNERSQIQNKAACMQILKARLYELELQKREDTLDEI 316

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAI 353
              KTEIG+G QIRSYVL PYQMVKDLR  +E ++   VL DGDLD F+      
Sbjct: 317 RGPKTEIGFGNQIRSYVLYPYQMVKDLRCGVETSNVDGVLEDGDLDPFIIGYHRW 371


>gi|319957316|ref|YP_004168579.1| bacterial peptide chain release factor 2 (brf-2) [Nitratifractor
           salsuginis DSM 16511]
 gi|319419720|gb|ADV46830.1| bacterial peptide chain release factor 2 (bRF-2) [Nitratifractor
           salsuginis DSM 16511]
          Length = 372

 Score =  252 bits (642), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 170/352 (48%), Positives = 234/352 (66%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS ++  +  +   +   +RL  +    ++P  W +   A  + +E+  L+  ++   E 
Sbjct: 13  LSTKMENITNIVKPEEIRKRLDEIEEMQQNPEFWTDSDRAAKISQEKTRLERTLAKYDEA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D     ELA  E D   L+   D  + +K  ++  +   +LSGE DS +A + +H
Sbjct: 73  KAALEDAQEYFELAKSEGDEETLEMLYDEAENLKEHIQQLEVAIMLSGEHDSANAIVTIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+ML RMY RWAE+  FK E L+   GEEAGIK  + +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASMLYRMYLRWAERHGFKVEVLDYQPGEEAGIKDVSFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVRISP+D+N++RHTSF+S+ V P ++D I+IEI + D RIDTYRASGAGGQH
Sbjct: 193 VENGIHRLVRISPFDANAKRHTSFTSVMVSPEINDDIDIEIEDKDIRIDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+RITHIPTG+VVQCQ +RSQHKNKA A  ML+++LYE E+ K++   +  E  
Sbjct: 253 VNKTESAIRITHIPTGIVVQCQNDRSQHKNKAAAMKMLKSRLYEYEMAKKQAEIDGIE-- 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K++IGWG QIRSYVLQPYQ VKD R+    T+   +LDGD+D  ++  L  +
Sbjct: 311 KSDIGWGHQIRSYVLQPYQQVKDTRSGQAFTNVEAILDGDIDKLLEGVLIAQ 362


>gi|15896100|ref|NP_349449.1| peptide chain release factor 2 [Clostridium acetobutylicum ATCC
           824]
 gi|15025890|gb|AAK80789.1|AE007782_3 Protein chain release factor B [Clostridium acetobutylicum ATCC
           824]
 gi|325510254|gb|ADZ21890.1| peptide chain release factor 2 [Clostridium acetobutylicum EA 2018]
          Length = 329

 Score =  252 bits (642), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 153/325 (47%), Positives = 217/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++P  W +V  A+ +  E + L   I     I+ R+ D+ +L+E+  E+++     E  
Sbjct: 1   MQEPDFWNDVKRAQEISMEIKFLKGRIDRFNSIESRIEDDNVLIEMCREDENEEEADEIL 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +  EV+  + E +LSGE D N+A L +H G GGT++QDW  MLLRMYTRWAE + 
Sbjct: 61  KEVRDLHEEVDNFKIEIILSGEYDRNNAILNLHTGVGGTDAQDWTQMLLRMYTRWAEAKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK + +++  G+EAGIKS ++ I G  AYG+LK E+G+HRLVRISP+++N +R TSF+S+
Sbjct: 121 FKVDIIDMLPGDEAGIKSVSINIDGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +  S +I I   D ++DTYRASGAGGQHVN T+SAVRITH+PTG+VVQCQ ERSQ
Sbjct: 181 EVLPQLTQSQDIVIRPEDLKVDTYRASGAGGQHVNKTESAVRITHLPTGIVVQCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK  A NML++KL EL+ +  +E          ++GWG QIRSYV QPY MVKD RT 
Sbjct: 241 HSNKETAMNMLKSKLVELKERMHKEKVEDLAGELKDMGWGNQIRSYVFQPYTMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E ++   V+DG++D F+   L  +
Sbjct: 301 VETSNVDAVMDGEIDKFIIEYLNKE 325


>gi|68535523|ref|YP_250228.1| peptide chain release factor 2 [Corynebacterium jeikeium K411]
 gi|260579727|ref|ZP_05847586.1| peptide chain release factor 2 [Corynebacterium jeikeium ATCC
           43734]
 gi|68263122|emb|CAI36610.1| peptide chain release factor RF-2 [Corynebacterium jeikeium K411]
 gi|258602157|gb|EEW15475.1| peptide chain release factor 2 [Corynebacterium jeikeium ATCC
           43734]
          Length = 377

 Score =  252 bits (642), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 160/358 (44%), Positives = 220/358 (61%), Gaps = 7/358 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D    R   L  K+ DP LW +   A+ +  E   + + +  +K +
Sbjct: 12  LDGTLTTIEKVLDLDELGDRARELEEKSADPSLWDDPDHAQQVTSELSRVQSKLKKVKGL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETS------DNLQRIKLEVEYKQFESLLSGEADSND 116
           + RL D  +L ++A EE                   + ++ E+E  +  ++LSGE D  +
Sbjct: 72  RQRLDDLPVLYDMAEEEAGDDPDAAQEAVQLADTEREELRQEIESLEVTTMLSGEYDERE 131

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
           A L + + AGG ++ DWA MLLRMYTRWAEK   K E  +I   EEAGIKSAT++I G  
Sbjct: 132 AVLNIRSAAGGVDAADWAEMLLRMYTRWAEKAGHKVEVYDISYAEEAGIKSATIVIHGEY 191

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
            YG L  EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I E+D R+D YR+S
Sbjct: 192 MYGTLSVEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVVEQTDHIDIDENDVRVDVYRSS 251

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ VNTTDSAVR+TH+PTG+VV CQ E+SQ +NKA A  +L+AKL E + Q+ +   
Sbjct: 252 GPGGQSVNTTDSAVRLTHVPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEEQAEM 311

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +  +   +   WG Q+R+YVL PYQMVKDLRTN+E   PS VLDGDLD F++A +  +
Sbjct: 312 DALKGDGSN-SWGNQMRNYVLHPYQMVKDLRTNVEVNDPSKVLDGDLDGFLEAGIRWR 368


>gi|307718929|ref|YP_003874461.1| peptide chain release factor 2 [Spirochaeta thermophila DSM 6192]
 gi|306532654|gb|ADN02188.1| peptide chain release factor 2 [Spirochaeta thermophila DSM 6192]
          Length = 361

 Score =  252 bits (642), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 168/352 (47%), Positives = 231/352 (65%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + R+    GG+F+  +  +++S L  +T  P LW +   A+ ++   + L         +
Sbjct: 1   MRRKSKKPGGIFENSSIKEQISRLEEETGRPDLWNDRKHAEEVLSRLRRLKVRYEGWASL 60

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + D   L +LA EE+D S  +E    L   + +    +   LL+ E D  DAYL +H
Sbjct: 61  VQEVEDIHTLYDLAAEENDPSQEEELRQQLAEAERKFRELRLRELLNEEYDQKDAYLTIH 120

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG E+ DWA+MLLRMY RW E++ F T+ +++ + +E GIKS T+ +KG  A+G+LK
Sbjct: 121 AGAGGMEACDWASMLLRMYLRWLERKGFSTQIVDMVE-DEGGIKSVTVEVKGDYAFGYLK 179

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+D++ RRHTSF+S++V P+++D IE++I   D RIDTYR+ GAGGQH
Sbjct: 180 GEAGVHRLVRISPFDASGRRHTSFASVYVSPIIEDDIEVDIRPEDLRIDTYRSQGAGGQH 239

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+PTG+VVQCQ ERSQHKN+  A  MLR++LYE   Q REE        
Sbjct: 240 VNKTESAVRITHLPTGIVVQCQNERSQHKNREIAMRMLRSRLYEYYQQLREEEQEKKAIE 299

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K +I WG QIRSYV QPY MVKDLRT +E  +   V+DGDLD F++A L  +
Sbjct: 300 KKDISWGNQIRSYVFQPYTMVKDLRTRVETGNIQAVMDGDLDMFIEAYLLQQ 351


>gi|330991179|ref|ZP_08315132.1| Peptide chain release factor 2 [Gluconacetobacter sp. SXCC-1]
 gi|329761765|gb|EGG78256.1| Peptide chain release factor 2 [Gluconacetobacter sp. SXCC-1]
          Length = 333

 Score =  252 bits (642), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 196/312 (62%), Positives = 247/312 (79%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W +   A+ LMRER  L N I  ++ ++  + D L L+ELA  E D +++ E    L+ +
Sbjct: 2   WNDAEAAQKLMRERTLLANQIEGVQRLEADVNDTLELVELAEMEGDSAVVAEAVAGLRAL 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
             E + ++ ESLLSGEAD ND YLEV+AGAGGTE+QDWA MLLRMYTRWAE+  +K   +
Sbjct: 62  AEEAKRRETESLLSGEADGNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTMM 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E  +GE+AGIKSAT+ + GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPVV
Sbjct: 122 ESSEGEQAGIKSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVV 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DDSIEIEI+E+D R+DT+RASGAGGQHVN T+SA+RITHIPTG+VV CQ +RSQH+N+A 
Sbjct: 182 DDSIEIEINEADLRVDTFRASGAGGQHVNKTESAIRITHIPTGIVVACQTDRSQHRNRAT 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A  ML+A++YE ELQKRE  A   E++KT+IGWG QIRSYVL PYQ+VKDLRTN+EKT+P
Sbjct: 242 AMTMLKARMYEQELQKREAAAAQTEANKTDIGWGHQIRSYVLAPYQLVKDLRTNVEKTNP 301

Query: 336 SDVLDGDLDDFM 347
             +LDGD+DDFM
Sbjct: 302 DAILDGDIDDFM 313


>gi|322435983|ref|YP_004218195.1| Peptide chain release factor 2 [Acidobacterium sp. MP5ACTX9]
 gi|321163710|gb|ADW69415.1| Peptide chain release factor 2 [Acidobacterium sp. MP5ACTX9]
          Length = 375

 Score =  252 bits (642), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 175/353 (49%), Positives = 231/353 (65%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  ++  L    D     + L+ +  K  DP +W +   ++ LMR+R+ L+  ++   E+
Sbjct: 12  VRDKVRELREYLDSSRLRRELAIVEEKIADPTVWADAARSQPLMRDRKRLETLLADDAEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             R  D     ELA E +D          +  +    +  + +++LSGE D  +A + VH
Sbjct: 72  ARRSDDIEAYFELAKEGEDTEPD--LVREIPALVEYADQLESKTMLSGETDLLNAIVTVH 129

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA ML+RMY RW E+++FK E  EI DG+EAGIKSAT  I G  A+G L 
Sbjct: 130 PGAGGTESQDWAEMLMRMYIRWGERQRFKVEINEIQDGDEAGIKSATFTISGEFAFGLLS 189

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+DS  RRHTSF+S++V P +DD+I I+I   D RIDTYR+ G GGQH
Sbjct: 190 GETGVHRLVRISPFDSAKRRHTSFASVFVSPEIDDTIVIDIKVEDLRIDTYRSGGKGGQH 249

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+V  CQ ERSQHKNK +A  M+R+KLYE EL K++      E S
Sbjct: 250 VNTTDSAVRITHLPTGLVTGCQNERSQHKNKERAMKMMRSKLYEYELDKKKAATRKIEDS 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K EIG+G QIRSYVLQPY+M KDLRT +E      VLDGDL+ F++  L +++
Sbjct: 310 KLEIGFGSQIRSYVLQPYRMAKDLRTRVEVGDVDKVLDGDLEPFIRGFLRMRR 362


>gi|297243831|ref|ZP_06927761.1| protein chain release factor B [Gardnerella vaginalis AMD]
 gi|296888252|gb|EFH26994.1| protein chain release factor B [Gardnerella vaginalis AMD]
          Length = 378

 Score =  252 bits (642), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 141/352 (40%), Positives = 213/352 (60%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  + + +    D D+    ++ L  +  +P LW +   A+ +  +     + +  ++ +
Sbjct: 13  VEAKYSLISKALDVDSLKATIADLEKQAAEPGLWDDSEHAQQVTSKLSAAQSQLKRLQAV 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D   L+EL  EE D   + E  + L  I  E++  + ++LL GE D+  A + + 
Sbjct: 73  EQRIEDTKTLIELGEEEGDADSMNEAQEELGNIAHELDDMEVQTLLDGEYDARSAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ D+A MLLRMY RWAE+  +KT+ ++    EEAGIKSAT  +  P AYG L 
Sbjct: 133 SGAGGVDAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HR+VRISP+D+  RR T FS++ V P+V+ +  I+I +SD R+DT++ASG GGQ 
Sbjct: 193 VEGGTHRMVRISPFDNQGRRQTGFSAVEVIPLVEATDHIDIPDSDIRVDTFQASGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT SAVRITH+PTG+VV  Q ERSQ +N+A A  +L+++L  L+  +           
Sbjct: 253 VNTTYSAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLKHAEEAAKKKELAGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD+D F++A +  +
Sbjct: 313 -IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWR 363


>gi|294790676|ref|ZP_06755834.1| peptide chain release factor 2 [Scardovia inopinata F0304]
 gi|294458573|gb|EFG26926.1| peptide chain release factor 2 [Scardovia inopinata F0304]
          Length = 370

 Score =  252 bits (642), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 143/353 (40%), Positives = 209/353 (59%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   +   +       N  +++  L  +   P LW +   A+++        N    + +
Sbjct: 12  EARSKFETISSALGRQNLAEKIVSLEKEASAPGLWDDQENAQLVTSRLSQTQNEAKRLDD 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D   L EL  EEDD     E    L  ++ ++   + ++LL GE D+  A + +
Sbjct: 72  LERRLDDIATLYELGSEEDDQDSKAEAEKELTAVRSDLSDLEIQTLLDGEYDNRAAVVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMY RWAE+  +K + ++    EEAGIKSAT  +  P AYG L
Sbjct: 132 RSGAGGVDAADWAQMLMRMYLRWAERHHYKVQIMDTSYAEEAGIKSATFEVDAPYAYGKL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+NSRR TSF+++ V P+V+ +  I+I +SD R+DTY + G GGQ
Sbjct: 192 SVEGGTHRLVRISPFDNNSRRQTSFAAVEVIPLVEPTDHIDIPDSDIRVDTYMSHGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVRITHIPTG+VV  Q ERSQ +N+A A ++L+++L  ++ ++          
Sbjct: 252 GVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMSVLQSRLLVMKQEEEAAKKKELAG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT  E + P  V DGD+D F+ A +  +
Sbjct: 312 D-VKASWGDQMRSYVLHPYQMVKDLRTGYETSDPQKVFDGDIDAFIDAGIRWR 363


>gi|78185691|ref|YP_378125.1| peptide chain release factor 2 [Synechococcus sp. CC9902]
 gi|78169985|gb|ABB27082.1| bacterial peptide chain release factor 2 (bRF-2) [Synechococcus sp.
           CC9902]
          Length = 356

 Score =  252 bits (642), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 145/343 (42%), Positives = 203/343 (59%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      R   L      P  W +   A+  MR    +   +  + + +  + D  
Sbjct: 3   RTVFDVPALNARQQDLEQLAAQPDFWNDQQNAQKQMRRLDEVKAQLQQLADWRSAIDDAK 62

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             LEL   E D  +L E    L  ++  ++  + E LLSGE D   A L ++AGAGGT++
Sbjct: 63  ATLELYELEADEEMLGEAQQGLTELRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDA 122

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRWAE    +    EI +GEEAGIKSAT+ ++G  AYG+L+ E+G HRL
Sbjct: 123 QDWAQMLLRMYTRWAEDHDMRVTIDEISEGEEAGIKSATIEVEGRYAYGYLRNEKGTHRL 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+++N +R TSF+ I V P +++ ++I+I + D  + T R+ GAGGQ+VN  ++AV
Sbjct: 183 VRISPFNANDKRQTSFAGIEVMPKLEEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI H+PTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R            E  WG 
Sbjct: 243 RIQHLPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QIR+YV  PYQMVKDLRT  E      V+DG LD F+ A+L  
Sbjct: 303 QIRNYVFHPYQMVKDLRTQEETNDVQAVMDGALDPFIDASLRQ 345


>gi|291278533|ref|YP_003495368.1| peptide chain release factor RF-1 [Deferribacter desulfuricans
           SSM1]
 gi|290753235|dbj|BAI79612.1| peptide chain release factor RF-1 [Deferribacter desulfuricans
           SSM1]
          Length = 355

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 129/350 (36%), Positives = 194/350 (55%), Gaps = 11/350 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F   +  +++ + L  K  DP++  +    + + +E   L   +   +E +    D   
Sbjct: 1   MFHKLEEVLEKYNILTEKLSDPNIMSDNKTYQQIAKEHAELKPIVEKYQEYKKINEDIEE 60

Query: 72  LLELALEEDDCSIL---QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
             ++    D         E  +  ++++      +   +     D  + YLE+ AG GG 
Sbjct: 61  AKQILESGDKELKELAEMELEEGKEKLEKIENELKLLLVPKDPYDEKNIYLEIRAGTGGD 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  LLRMY R+AEK ++KTE ++ +D    G K   LLIKG  AY  LK E G H
Sbjct: 121 EATLFAADLLRMYMRYAEKHRWKTEIVDYNDTGVGGYKEVVLLIKGKGAYSRLKFEGGGH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ RI   +S  R HTS  ++ V P   D +E+EI  SD RID +RASGAGGQHVNTTDS
Sbjct: 181 RVQRIPVTESGGRIHTSACTVAVLP-EADDVEVEIDPSDLRIDVFRASGAGGQHVNTTDS 239

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITHIPTG+VV CQ ERSQ KNK +A  +L+AK+ E+E++K++E   I  + K ++G 
Sbjct: 240 AVRITHIPTGIVVSCQDERSQIKNKEKAMKLLKAKILEMEIRKQQE--AIASNRKLQVGS 297

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G    +IR+Y   P   V D R N+   +   V++G+LD+ + A +A  +
Sbjct: 298 GDRSERIRTYNF-PQNRVTDHRINLTLYNLDQVMEGELDEIIDALIAYDQ 346


>gi|322411427|gb|EFY02335.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 327

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 147/325 (45%), Positives = 200/325 (61%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +   W + I A+   ++   L +       +Q+   +  + LE+  E+D      E S
Sbjct: 1   MTESDFWNDNIAAQKTSQKLNELKSTYETFHNMQELSDETELYLEMLEEDDSVKDDLEAS 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
                  L          LS   D N+A LE+H G+GGTE+QDWA+ML RMYTR+   + 
Sbjct: 61  LETLGQILASYEMTLL--LSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS  RRHTSF S+
Sbjct: 119 FKVETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFVSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+    N  +  K EI WG QIRSYV  PY MVKD RTN
Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAAEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGD++ F+ A L  +
Sbjct: 299 YEVAQVDKVMDGDIEGFIDAYLKWR 323


>gi|148272488|ref|YP_001222049.1| peptide chain release factor RF-2 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147830418|emb|CAN01353.1| peptide chain release factor RF-2 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 367

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 145/354 (40%), Positives = 218/354 (61%), Gaps = 3/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L    + +  +   +   Q +  L+ +  +P LW +  +A+ +  +  H  + +  I E
Sbjct: 12  ELRDTYSNIRSVIGVERLQQEVEELSAQAGEPDLWDDTEKAQKVTSDLSHRQSELKRIDE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +Q RL D  +L+E+A   DD    +E    L  I   ++  + ++LL+GE D   A + +
Sbjct: 72  LQRRLDDLDVLVEMAK--DDEESAEEAVVELAGITKIMDELEVQTLLNGEFDPRPAVVTI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG ++ D+A ML+RMY RWAE+  +    L+    EEAGIKSAT  I  P A+G L
Sbjct: 130 RAGAGGVDAADFAEMLMRMYLRWAEQHDYSATVLDTSYAEEAGIKSATFEIDAPYAFGTL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVR+SP++S  +R TSF+++ V P+++ +  IEI E++ R+D +R+SG GGQ
Sbjct: 190 SVEAGTHRLVRMSPFNSAGKRQTSFAAVEVVPLIEQTESIEIPENEMRVDVFRSSGPGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTG+VV CQ E+SQ +N+A A  +L+++L  ++ ++          
Sbjct: 250 SVNTTDSAVRITHLPTGIVVTCQNEKSQIQNRAAALRVLQSRLLLVQREQEAATKKELAG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           + T   WG Q+RSYVL PYQMVKDLRT  E  +PS+V DGDLD F+ A +  +K
Sbjct: 310 NIT-ASWGDQMRSYVLAPYQMVKDLRTEHEVNNPSNVFDGDLDGFISAGIRWRK 362


>gi|193215043|ref|YP_001996242.1| hypothetical protein Ctha_1332 [Chloroherpeton thalassium ATCC
           35110]
 gi|193088520|gb|ACF13795.1| hypothetical protein Ctha_1332 [Chloroherpeton thalassium ATCC
           35110]
          Length = 366

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 158/350 (45%), Positives = 224/350 (64%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S +L+ L G  D D  +  ++ L  KT     W N   A+ +++E            ++
Sbjct: 12  ISERLSLLRGFLDIDARLNAIAELEKKTAAEGFWSNQESAQKVLKEISGHREWTEDFLDL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L      LE+A E +D S L E   N+ ++   V   +F ++LSG  D  +A L +H
Sbjct: 72  EKTLQGEEESLEIAEELEDESYLAEAEKNIDKLDRAVHALEFRNMLSGADDKRNALLTIH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+QDWA+ML RMY RWAE+R FK    +  +G+ AGIK+ATL I+G  AYG+LK
Sbjct: 132 AGAGGTEAQDWADMLYRMYMRWAERRGFKVFTDDYQEGDGAGIKTATLEIQGDYAYGYLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR+SP+D+N+RRHTSF+S++ YP   D +EIEI + D  +DT+R+ G GGQ+
Sbjct: 192 AENGVHRLVRVSPFDANARRHTSFASVYAYPEAPDDVEIEIRKEDLEMDTFRSGGKGGQN 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++AVRI H+P+G+VV CQQERSQ +N+ +A  MLR++LY+L+ ++ E      E  
Sbjct: 252 VNKVETAVRIKHVPSGIVVACQQERSQFQNRERAMKMLRSRLYQLKREEEEAAKLALEGK 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K +I WG QIRSYVL   + +KD RTN E  +   VLDGD+D F++  LA
Sbjct: 312 KKKIEWGSQIRSYVLDD-RRIKDHRTNHESFNVEAVLDGDIDQFIERYLA 360


>gi|329116145|ref|ZP_08244862.1| peptide chain release factor 2 [Streptococcus parauberis NCFD 2020]
 gi|326906550|gb|EGE53464.1| peptide chain release factor 2 [Streptococcus parauberis NCFD 2020]
          Length = 327

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 149/325 (45%), Positives = 202/325 (62%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L        ++Q+   +  + LE+  E+D      E S
Sbjct: 1   MSEPDFWNDNIAAQKTSQELNELKVKFDTYHDMQNLSEETELYLEMLDEDDSLQEELEAS 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
                  L          LS   D N+A LE+H G+GGTE+QDWA+ML RMYTR+   + 
Sbjct: 61  LEKLDQILSSYEMTLL--LSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+ E  N  +  K EI WG QIRSYV  PY MVKD RT+
Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTS 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DG +D F+ A L  +
Sbjct: 299 FEVAQVDKVMDGFIDGFIDAYLKWR 323


>gi|157164977|ref|YP_001467027.1| peptide chain release factor 2 [Campylobacter concisus 13826]
 gi|166223623|sp|A7ZE19|RF2_CAMC1 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|112800036|gb|EAT97380.1| peptide chain release factor 2 [Campylobacter concisus 13826]
          Length = 366

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 171/354 (48%), Positives = 232/354 (65%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL  ++  +G +   D+   RL  +    +DP  WQ++  A  L +E+  + N ++   +
Sbjct: 12  KLQTKVENIGSIVKPDDIKARLKEIEAIEQDPDFWQDIARAGALNKEKTKISNMLAKFSD 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
               + D   L ELA  E+D   +    ++ + +  ++   +   LLSGE D  +A + +
Sbjct: 72  ANQAVSDAKELFELANSENDEETINSLFEDAKNLDEKIVNLEISMLLSGEDDGKNAIVSI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTES DWA+ML RMY R+ E+  FK E L+  +GEEAG+K  + ++KG NAYG+ 
Sbjct: 132 HPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFIVKGENAYGYF 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVR SP+DS  RRHTSFSS+ V P VDD IEIEI E D +IDTYRASGAGGQ
Sbjct: 192 KAENGIHRLVRTSPFDSAGRRHTSFSSVMVSPEVDDDIEIEIEEKDLKIDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SA+RITHIPTG+VVQCQ +RSQHKN+A A  ML+++LYELEL K++E +N  E 
Sbjct: 252 HVNKTESAIRITHIPTGIVVQCQNDRSQHKNRATAMKMLKSRLYELELMKQQEASNSVE- 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            K+EIGWG QIRSYVL PYQ VKD R+    +    +LDGD+   ++  L  +K
Sbjct: 311 -KSEIGWGHQIRSYVLFPYQQVKDNRSGEAYSQTDAILDGDIKKMIEGVLIAQK 363


>gi|297848140|ref|XP_002891951.1| hypothetical protein ARALYDRAFT_474798 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337793|gb|EFH68210.1| hypothetical protein ARALYDRAFT_474798 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 470

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 159/351 (45%), Positives = 225/351 (64%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S+ +  +     W   + RL  L+ +   P LW + I A  + RE   L   +  +   
Sbjct: 110 ISQSIQVIKRRLQWKKLLVRLKVLSAELNKPDLWNDPIHAGKISREHGSLTGKMKGVMTF 169

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L +++ +L+LA EE+D  +  ET   +  ++   + K+ E+LLS E D    Y+EV 
Sbjct: 170 ERELLEHIDMLKLAKEENDTELESETLKAMMDMRRVSKEKELEALLSAENDPCSCYIEVQ 229

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+M++ MY  WA++RKF    ++   GE AGIK AT+ + G  +YG+ K
Sbjct: 230 AGAGGTESNDWASMVMEMYKTWAQRRKFSVTVVDEAAGEIAGIKRATIKVNGEYSYGYAK 289

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+DS  RRHTSF+++ V P+  D S  ++I++SD RI+ +R+ GAGGQ
Sbjct: 290 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGSTRVQINDSDLRIERFRSGGAGGQ 349

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H NTTDSAVRI HIPTG+   CQ ERSQH NKA A  +L+++L +LE+ ++  +      
Sbjct: 350 HANTTDSAVRIIHIPTGITATCQNERSQHMNKASAMAVLQSRLDQLEMARQTAMNAQHTQ 409

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           S TEI WG QIR+YVL PY+MVKDLRTN E + P  VL+GDLD F+ + L+
Sbjct: 410 SLTEISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSFLS 460


>gi|77413702|ref|ZP_00789885.1| peptide chain release factor 2 [Streptococcus agalactiae 515]
 gi|77160247|gb|EAO71375.1| peptide chain release factor 2 [Streptococcus agalactiae 515]
          Length = 326

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 148/325 (45%), Positives = 210/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L         +Q+   +  +LLE+   ++D S+ +E  
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEM--LDEDDSLKEELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +NL ++   +   +   LLS   D N+A LE+H G+GGTE+QDW ++LLRMYTR+     
Sbjct: 59  ENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRMYTRFGNANG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+E+ + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVEVRDYDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  PY MVKD RTN
Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DG+++ F+ A L  +
Sbjct: 299 FELAQVDKVMDGEINGFIDAYLKWR 323


>gi|152971837|ref|YP_001336946.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238896431|ref|YP_002921169.1| peptide chain release factor 2 [Klebsiella pneumoniae NTUH-K2044]
 gi|262042532|ref|ZP_06015689.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|330010996|ref|ZP_08306940.1| peptide chain release factor 2 [Klebsiella sp. MS 92-3]
 gi|150956686|gb|ABR78716.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238548751|dbj|BAH65102.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|259040092|gb|EEW41206.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328534333|gb|EGF60944.1| peptide chain release factor 2 [Klebsiella sp. MS 92-3]
          Length = 320

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 173/318 (54%), Positives = 220/318 (69%), Gaps = 1/318 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W     A+ L +ER  L+  +  + ++   L D   LL+LA+E DD     E    L  +
Sbjct: 2   WNEPERAQALGKERSSLEAIVDTLDQMSQGLEDVAGLLDLAVEADDEETFNEAVAELDTL 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           + ++   +F  + SGE DS D YL++ AG+GGTE+QDWA+ML+RMY RWAE R FKTE +
Sbjct: 62  EEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLMRMYLRWAEARGFKTEII 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E  +GE AGIKS T+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP V
Sbjct: 122 EESEGEVAGIKSVTIKIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEV 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           +D I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPTG+V QCQ +RSQHKNK Q
Sbjct: 182 EDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGLVTQCQNDRSQHKNKDQ 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A   ++AKLYELE+QK+       E +K++IGWG QIRSYVL     +KDLRT +E  + 
Sbjct: 242 AMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNT 300

Query: 336 SDVLDGDLDDFMKATLAI 353
             VLDG LD F++A+L  
Sbjct: 301 QAVLDGSLDQFIEASLKA 318


>gi|126657098|ref|ZP_01728269.1| peptide chain release factor 2 [Cyanothece sp. CCY0110]
 gi|126621641|gb|EAZ92351.1| peptide chain release factor 2 [Cyanothece sp. CCY0110]
          Length = 358

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 142/345 (41%), Positives = 217/345 (62%), Gaps = 1/345 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD       +  L      P  W     A+  +++   L + +   ++  ++L D  
Sbjct: 9   RTIFDLPALKANIKNLENTAAQPQFWDEPETAQKTLQKLNDLKSQLEQYQQWCEQLEDTE 68

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            + EL   EDD ++ +E  +N+ ++   ++  + + LLSG  D+  A L ++AGAGGT++
Sbjct: 69  AIAELLELEDDTTLRREAQENITQLNHNLDRWELQQLLSGIYDTKGAVLTINAGAGGTDA 128

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRW E++ +K    E+ +G+EAGIKSATL I+G  A+G+LKGE+G HRL
Sbjct: 129 QDWAQMLLRMYTRWGEQQGYKVNLTELSEGDEAGIKSATLEIEGCYAFGYLKGEKGTHRL 188

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSI-EIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           VRISP+++N +R TSF+ + V P++++   +++I + D  I T R+ G GGQ+VN  ++A
Sbjct: 189 VRISPFNANGKRQTSFAGVEVMPMLEEDDLKVDIPDKDLDISTSRSGGKGGQNVNKVETA 248

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRI H+PTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R +          E  WG
Sbjct: 249 VRIVHVPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQEIAEIRGDMVEAAWG 308

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            QIR+YV  PYQMVKDLRTN+E T  + V+DG+LD F++A L   
Sbjct: 309 NQIRNYVFHPYQMVKDLRTNVETTDVTGVMDGNLDSFIEAYLRYD 353


>gi|318040666|ref|ZP_07972622.1| peptide chain release factor 2 [Synechococcus sp. CB0101]
          Length = 356

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 143/341 (41%), Positives = 210/341 (61%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      R   L      P  W +  +A+  MR+   +   +  + + Q  + D  
Sbjct: 3   RTVFDVPALKARQQDLEQLASQPDFWDDQKQAQAKMRQLDEVKAQLEQLSQWQGAVADAE 62

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +E+   E D  +L E+++ LQ+++ +++  + E LLSG  D   A + ++AGAGGT++
Sbjct: 63  ATVEIYGLEPDEELLSESNEALQKLRSDLDRWELERLLSGPYDKEGAVISINAGAGGTDA 122

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA ML+RMYTRWAE    K    E+ +GEEAGIKS T+ I+G  AYG+L+ E+G HRL
Sbjct: 123 QDWALMLMRMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRL 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+++N +R TSF+ + V P +++ ++++I + D  I T R+ GAGGQ+VN  ++AV
Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKIEEEVKLDIPDKDLEITTSRSGGAGGQNVNKVETAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI HIPTG+ V+C QERSQ +NK +A  +L AKL  +  ++R            E  WG 
Sbjct: 243 RILHIPTGLFVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QIR+YV  PYQMVKDLRT  E T    V+DGDLD F+++ L
Sbjct: 303 QIRNYVFHPYQMVKDLRTQHETTDVQGVMDGDLDPFIQSLL 343


>gi|152991913|ref|YP_001357634.1| peptide chain release factor 2 [Sulfurovum sp. NBC37-1]
 gi|166225117|sp|A6Q718|RF2_SULNB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|151423774|dbj|BAF71277.1| peptide chain release factor 2 [Sulfurovum sp. NBC37-1]
          Length = 364

 Score =  251 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 168/352 (47%), Positives = 234/352 (66%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS+++  +  +   D   +RL  +    +DP+ W +   A  + +E+   +  +      
Sbjct: 13  LSKKMENISNIVKPDELKKRLDEIEEMQQDPNFWNDTANAGKISQEKTRTERILETYHNA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            D + D +   E+A  E D   L+   ++ + +K      + + +LSGE DSN+A + +H
Sbjct: 73  NDAVYDAIEYFEMAKAEKDEETLEMLYEDAETLKERTNALEVQMMLSGEHDSNNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+ML RMY RWAE+  FK E L+   GEEAGIK  + +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASMLYRMYLRWAERHGFKVEVLDYQPGEEAGIKDVSFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVRISP+DSN++RHTSF+S+ V P +DD I+IEI + D RIDTYRASGAGGQH
Sbjct: 193 VENGIHRLVRISPFDSNAKRHTSFTSVMVSPEIDDDIDIEIEDKDLRIDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+RITH PTG+VVQCQ +RSQHKNK+ A  ML+++LYE E+ K++   +  E  
Sbjct: 253 VNKTESAIRITHEPTGIVVQCQNDRSQHKNKSAAMKMLKSRLYEYEMAKKQAEIDGVE-- 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K++IGWG QIRSYV+QPYQ VKD R+    T+   +LDGD+D  ++  L  +
Sbjct: 311 KSDIGWGHQIRSYVMQPYQQVKDTRSGQAFTNVDAILDGDIDKLLEGVLISQ 362


>gi|325105358|ref|YP_004275012.1| bacterial peptide chain release factor 2 (bRF-2) [Pedobacter
           saltans DSM 12145]
 gi|324974206|gb|ADY53190.1| bacterial peptide chain release factor 2 (bRF-2) [Pedobacter
           saltans DSM 12145]
          Length = 362

 Score =  251 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 147/350 (42%), Positives = 221/350 (63%), Gaps = 2/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  L    D D  +  L      T +P  W N  EA+ ++   +   +        
Sbjct: 9   LRDRITSLRRHLDIDAKLIELHREEAMTLEPTFWDNPKEAEKILHTIKIRKSWTEAYSNA 68

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + D  ++ E     D  +      +     +  +E  +F+++LS E D  +A L++ 
Sbjct: 69  NAAVEDLAVMYEFYQSGDATADE--VDEAYAYAQKMLEELEFKNMLSAEEDQLNAVLQIT 126

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML+RMY  W EK   K    +  +G+ AGIKS TL  +G  AYG LK
Sbjct: 127 AGAGGTESCDWASMLMRMYIMWGEKHGCKVIEQDSQEGDVAGIKSVTLQFEGDFAYGHLK 186

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+DSN++RHTSF+S++VYP++DD+I+I+++ +D   +T+R+ GAGGQ+
Sbjct: 187 GENGVHRLVRISPFDSNAKRHTSFASVYVYPLIDDNIDIQVNPADLEFETFRSGGAGGQN 246

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++AVR+ H PTG++++ Q+ RSQ +NK  A  +L+++LYE+E++KR E +   ES 
Sbjct: 247 VNKVETAVRLYHKPTGIIIKNQESRSQLQNKENAIRLLKSQLYEIEMRKRREKSAAIESD 306

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K +I WG QIR+YVL PY+++KD RT+ E ++  DVLDGDLD+F+KA L 
Sbjct: 307 KKKIEWGSQIRNYVLHPYKLIKDNRTDYETSNVQDVLDGDLDEFIKAYLM 356


>gi|213019226|ref|ZP_03335033.1| protein chain release factor b [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212995335|gb|EEB55976.1| protein chain release factor b [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 337

 Score =  251 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 170/337 (50%), Positives = 237/337 (70%), Gaps = 1/337 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              RL  L+++  + +LWQ+  +A+ +++ER  + + I    +++    D++ L+  A++
Sbjct: 1   MKLRLEELDSQASNDNLWQDNQKAQEILKERSKIKHEIESFSKLESDYNDSISLMRSAID 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E+D     E    L +++  ++ K+ ESL +GEAD+N+ +LE+H+GAGGTES DW  ML+
Sbjct: 61  ENDEEFFSEVKGELVKLEKLIKLKETESLFTGEADNNNCFLEIHSGAGGTESNDWTEMLM 120

Query: 139 RMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
           RMYTRWAE    FK E +E  DG+  GIKS T+ I G  AYGW K E GVHRLVRISP+D
Sbjct: 121 RMYTRWAEIYHNFKVEVVEKLDGDAVGIKSTTIKIIGEKAYGWAKSESGVHRLVRISPFD 180

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +N +RHTSF+S+ V PV++DSI+I + E D +IDTYRASGAGGQHVN T+SAVRITHIPT
Sbjct: 181 ANGKRHTSFASVGVTPVIEDSIDIVVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPT 240

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           GVV QCQ  RSQHKNK +A  +L+ +LY++EL+K+E+        K +IGWG QIRSYV+
Sbjct: 241 GVVAQCQNGRSQHKNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGSQIRSYVM 300

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PYQMVKDLRT  E  + + V DG++D F+ + L +K
Sbjct: 301 HPYQMVKDLRTGHEVGNINSVFDGNIDCFIVSVLELK 337


>gi|254973803|ref|ZP_05270275.1| peptide chain release factor 2 [Clostridium difficile QCD-66c26]
 gi|260681922|ref|YP_003213207.1| peptide chain release factor 2 [Clostridium difficile CD196]
 gi|260685520|ref|YP_003216653.1| peptide chain release factor 2 [Clostridium difficile R20291]
 gi|260208085|emb|CBA60326.1| peptide chain release factor 2 [Clostridium difficile CD196]
 gi|260211536|emb|CBE01711.1| peptide chain release factor 2 [Clostridium difficile R20291]
          Length = 338

 Score =  251 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 161/329 (48%), Positives = 232/329 (70%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             K      W +   A+ +++E + L   +   + ++  L D  +L+E+ LEEDD S+ +
Sbjct: 8   EEKMNQQDFWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEDDDSVER 67

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           +   +++ ++ ++   + ++LL+GE D N+A L ++AG GG ++QDWA MLLRMY RW+E
Sbjct: 68  DIEKSIESMEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSE 127

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            + +K + L+I    EAGIK+AT+L++G NAYG+LK E+GVHRLVRISP+D + +RHTSF
Sbjct: 128 SKGYKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSF 187

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +SI V P +D++IE+EI+ SD +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ E
Sbjct: 188 ASIDVTPELDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNE 247

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQH NK +A  +L AKL EL+  +++E     +   ++I WG QIRSYV QPY++VKD 
Sbjct: 248 RSQHLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWGSQIRSYVFQPYKLVKDH 307

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           RTN E  +   V++G++D F+   L + K
Sbjct: 308 RTNAEFGNVDSVMNGNIDLFINEYLKMNK 336


>gi|58696790|ref|ZP_00372322.1| peptide chain release factor 2 [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|58698424|ref|ZP_00373334.1| peptide chain release factor 2 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58698511|ref|ZP_00373415.1| peptide chain release factor 2 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|225630212|ref|YP_002727003.1| Protein chain release factor B [Wolbachia sp. wRi]
 gi|58534979|gb|EAL59074.1| peptide chain release factor 2 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58535047|gb|EAL59136.1| peptide chain release factor 2 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58537012|gb|EAL60158.1| peptide chain release factor 2 [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|225592193|gb|ACN95212.1| Protein chain release factor B [Wolbachia sp. wRi]
          Length = 336

 Score =  251 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 169/331 (51%), Positives = 238/331 (71%), Gaps = 1/331 (0%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL  L+++  + +LWQ+  +A+ +++ER  + N +    +++    D + L++ A++E+D
Sbjct: 2   RLEELDSQASNDNLWQDNQKAQEILKERSKIKNDVESFLKLESDYNDAISLMKSAIDEND 61

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
                E  + L +++  ++YK+ ESL +GEAD+N+ +LE+H+GAGGTES DWA ML+RMY
Sbjct: 62  EEFFSEVENELAKLEKLIKYKETESLFTGEADNNNCFLEIHSGAGGTESNDWAEMLMRMY 121

Query: 142 TRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
            RWAE    FK E +E  +GE  GIKSA + I G  AYGW K E G+HRLVRISP+D+N 
Sbjct: 122 VRWAEIYHNFKVEVVEKLEGESVGIKSAMIKIVGEKAYGWAKSESGIHRLVRISPFDANG 181

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           +RHTSF+S+ V PV++DSI+I + E D +IDTYRASGAGGQHVN T+SAVRITHIPTGVV
Sbjct: 182 KRHTSFASVGVTPVIEDSIDIAVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTGVV 241

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           VQCQ  RSQH+NK +A  +L+ +LY++EL+K+E+        K +IGWG QIRSYV+ PY
Sbjct: 242 VQCQNGRSQHRNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGNQIRSYVMHPY 301

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QMVKDLRT  E  + + V DG++D F+ + L
Sbjct: 302 QMVKDLRTGHEVGNINSVFDGNIDCFIVSVL 332


>gi|283783522|ref|YP_003374276.1| peptide chain release factor 2 [Gardnerella vaginalis 409-05]
 gi|283441040|gb|ADB13506.1| peptide chain release factor 2 [Gardnerella vaginalis 409-05]
          Length = 378

 Score =  251 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 141/352 (40%), Positives = 212/352 (60%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  + + +    D D+    ++ L  +  +P LW +   A+ +  +     + +  ++ +
Sbjct: 13  VEAKYSSISKALDVDSLKATIADLEKQAAEPGLWDDSEHAQQVTSKLSAAQSQLKRLQAV 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             R+ D   L+EL  EE D   + E  + L  I  E++  + ++LL GE D+  A + + 
Sbjct: 73  DQRIEDTKTLIELGQEEGDADSMSEAQEELGNIAHELDDMEVQTLLDGEYDARSAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ D+A MLLRMY RWAE+  +KT+ ++    EEAGIKSAT  +  P AYG L 
Sbjct: 133 SGAGGVDAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HR+VRISP+D+  RR T FS++ V P+V+ +  I+I +SD R+DT++ASG GGQ 
Sbjct: 193 VEGGTHRMVRISPFDNQGRRQTGFSAVEVIPLVEATDHIDIPDSDIRVDTFQASGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT SAVRITH+PTG+VV  Q ERSQ +N+A A  +L+++L  L+  +           
Sbjct: 253 VNTTYSAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLKHAEEAAKKKELAGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD+D F++A +  +
Sbjct: 313 -IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWR 363


>gi|99035041|ref|ZP_01314835.1| hypothetical protein Wendoof_01000330 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 336

 Score =  251 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 169/331 (51%), Positives = 237/331 (71%), Gaps = 1/331 (0%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL  L+++  +  LWQ+  +A+ +++ER  + N +    +++    D + L++ A++E+D
Sbjct: 2   RLEELDSQASNDDLWQDNQKAQEVLKERSKIKNDVESFLKLESDYNDAISLMKSAIDEND 61

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
                E  + L +++  ++YK+ ESL +GEAD+N+ +LE+H+GAGGTES DWA ML+RMY
Sbjct: 62  EEFFSEVENELAKLEKLIKYKETESLFTGEADNNNCFLEIHSGAGGTESNDWAEMLMRMY 121

Query: 142 TRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
            RWAE    FK E +E  +GE  GIKSA + I G  AYGW K E G+HRLVRISP+D+N 
Sbjct: 122 IRWAEIYHNFKVEVVEKLEGESVGIKSAMIKIVGEKAYGWAKSESGIHRLVRISPFDANG 181

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           +RHTSF+S+ V PV++DSI+I + E D +IDTYRASGAGGQHVN T+SAVRITHIPTGVV
Sbjct: 182 KRHTSFASVGVTPVIEDSIDIAVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTGVV 241

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           VQCQ  RSQH+NK +A  +L+ +LY++EL+K+E+        K +IGWG QIRSYV+ PY
Sbjct: 242 VQCQNGRSQHRNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGNQIRSYVMHPY 301

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           QMVKDLRT  E  + + V DG++D F+ + L
Sbjct: 302 QMVKDLRTGHEVGNINSVFDGNIDCFIVSVL 332


>gi|116671212|ref|YP_832145.1| peptide chain release factor 2 [Arthrobacter sp. FB24]
 gi|229576665|sp|A0JYC5|RF2_ARTS2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|116611321|gb|ABK04045.1| bacterial peptide chain release factor 2 (bRF-2) [Arthrobacter sp.
           FB24]
          Length = 371

 Score =  251 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 138/352 (39%), Positives = 217/352 (61%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L    + +  + + +   + ++ L+ +  +P+LW +   A+ +     H  + +  +  +
Sbjct: 13  LRATYSSIENVSNVEELKEDIAELSERAGEPNLWDDPAAAQKITSRLSHRQSELERLNTL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             R+ D  +L+EL  +EDD   + E +  L+ I+  ++  +  +LLSGE D  +A + + 
Sbjct: 73  VSRIDDLEVLVELGQDEDDADSMGEAAAELESIRKSLKDLEVVTLLSGEFDEREAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A MLLRMY RWAE+  + T  ++    EEAG+KSAT  +  P AYG L 
Sbjct: 133 AGAGGVDAADFAEMLLRMYLRWAERHGYPTTIMDTSYAEEAGLKSATFEVNAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++ +  I+I +++ R+D +R+SG GGQ 
Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDSIDIPDNEIRVDVFRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG VV  Q E+SQ +N+A A  +L+++L  L+ ++ +         
Sbjct: 253 VNTTDSAVRLTHIPTGTVVSMQNEKSQLQNRAAALRVLQSRLLLLKKEQEDAEKKAFAGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  WG Q+RSYVL PYQMVKDLRT  E  + S V DG++DDF+ A +  +
Sbjct: 313 -VKASWGDQMRSYVLNPYQMVKDLRTEHEVGNTSAVFDGEIDDFIDAGIRWR 363


>gi|88809865|ref|ZP_01125371.1| peptide chain release factor 2 [Synechococcus sp. WH 7805]
 gi|88786249|gb|EAR17410.1| peptide chain release factor 2 [Synechococcus sp. WH 7805]
          Length = 356

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 148/343 (43%), Positives = 207/343 (60%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      R   L      P  W +   A+  MR    +   +  ++  Q  + D  
Sbjct: 3   RTVFDVPALNARQQDLEQLAAQPDFWDDQQNAQKQMRRLDEVKAMLQQLETWQGAVSDAQ 62

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             LEL   E D  +L E    L +++ +++  + E LLSGE D   A L ++AGAGGT++
Sbjct: 63  ATLELYDLEPDEDMLGEAQGGLNQLRRDLDRWELERLLSGEYDKEGAVLSINAGAGGTDA 122

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRWAE R  K    E+ +GEEAGIKSAT+ I+G  AYG+L+ E+G HRL
Sbjct: 123 QDWAQMLLRMYTRWAEDRGMKVTVDELSEGEEAGIKSATIEIEGRYAYGYLRNEKGTHRL 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+++N +R TSF+ + V P +++ ++I+I + D  + T R+ GAGGQ+VN  ++AV
Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKLEEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI HIPTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R            E  WG 
Sbjct: 243 RILHIPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGN 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QIR+YV  PYQMVKDLRT  E      V+DGDL+ F++A L  
Sbjct: 303 QIRNYVFHPYQMVKDLRTQEETNDVQGVMDGDLEPFIQALLRQ 345


>gi|88812905|ref|ZP_01128149.1| hypothetical protein NB231_00155 [Nitrococcus mobilis Nb-231]
 gi|88789827|gb|EAR20950.1| hypothetical protein NB231_00155 [Nitrococcus mobilis Nb-231]
          Length = 325

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 175/324 (54%), Positives = 228/324 (70%), Gaps = 1/324 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P +W +   A  L RER  L   +S ++ +   L D   LLELA  E+D + L E  
Sbjct: 1   MEQPDVWNDPERAHELNRERVRLQTLVSSLERLTRGLADTAELLELARTENDEATLAELD 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            ++   + E+E  +F  + SGE D  +A+L++ AG+GGTE+QDWANMLLRMY RW E+++
Sbjct: 61  ADVTGYQSEIEALEFRRMFSGEMDERNAFLDIQAGSGGTEAQDWANMLLRMYLRWVEQKR 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E +E  +GE AGIKSATL I+G  A+GWL+ E GVHRLVR SP+DS +RRHTSF+++
Sbjct: 121 FTAEIIEFSEGEVAGIKSATLRIEGDYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFAAV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           +V P +DD++E+EI+ +D RID YRASGAGGQHVN T+SAVRITH+PTG+V QCQ +RSQ
Sbjct: 181 FVSPELDDAVEVEINPADLRIDVYRASGAGGQHVNRTESAVRITHMPTGIVTQCQNDRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           HKNKA A   LRAKLYELE+ KR E A+  E SK +IGWG QIRSYVL     +KDLRT 
Sbjct: 241 HKNKATAMKQLRAKLYELEMHKRREQADQVEESKADIGWGSQIRSYVLD-QSRIKDLRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
           +E      VL+G LD F++A+L  
Sbjct: 300 VEIGHTQAVLNGALDPFIEASLKA 323


>gi|219685347|ref|ZP_03540166.1| peptide chain release factor 2 [Borrelia garinii Far04]
 gi|219673120|gb|EED30140.1| peptide chain release factor 2 [Borrelia garinii Far04]
          Length = 350

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 149/347 (42%), Positives = 213/347 (61%), Gaps = 4/347 (1%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG FD      ++     +    + W +   A+ +++ +  L N I   +E+ +++ 
Sbjct: 5   KAFGGSFDKKEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIK 64

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   L       ++   +         ++ + +     S    E D N A+L +H+GAGG
Sbjct: 65  DLSDL---CEIIENEKDINSLEIEFNVLEKQYKDLLTISYFKEELDINSAFLTIHSGAGG 121

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+
Sbjct: 122 TEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGI 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRL+RISP+D+  +RHTSF+S++V PV+D+ IEI I   D RIDTYRASGAGGQHVN T 
Sbjct: 181 HRLIRISPFDAAKKRHTSFASVFVDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHVNKTS 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     +  K EI 
Sbjct: 241 SAVRITHIETGIVTQSQSDRSQHKNKDMAMKVLKSRLYEYYKNKEDEKNKSKQELKKEIS 300

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L  K
Sbjct: 301 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 347


>gi|307155327|ref|YP_003890711.1| hypothetical protein Cyan7822_5564 [Cyanothece sp. PCC 7822]
 gi|306985555|gb|ADN17436.1| hypothetical protein Cyan7822_5564 [Cyanothece sp. PCC 7822]
          Length = 370

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 154/360 (42%), Positives = 225/360 (62%), Gaps = 8/360 (2%)

Query: 2   KLSRQLNCLGG-------LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN 54
           +L R++  +G          D      ++  L      P  W +   A+  ++E   L +
Sbjct: 5   ELKREIELIGSRLGKTQDYLDLPTLGAKIKDLEQVAAQPEFWDSPDMAQTTLQELNELKS 64

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
           A+   ++ Q +L D   ++EL   E+D S+L+E   NL+++  E+E  + + LLSG  D+
Sbjct: 65  ALELYQQWQTQLEDAKAIVELLELEEDTSLLEEAQTNLEQLNHELERWELQQLLSGLYDA 124

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
             A L ++AGAGGT++QDWA MLLRMYTRW EK+ +K    EI +G+EAG+KSATL I+G
Sbjct: 125 KGAVLTINAGAGGTDAQDWAEMLLRMYTRWGEKQGYKVHLAEISEGDEAGLKSATLEIEG 184

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTY 233
             AYG+LKGE+G HRLVRISP+++N +R TSF+ + V P    +++ +EI E D  I T 
Sbjct: 185 RYAYGYLKGEKGTHRLVRISPFNANGKRQTSFAGVEVMPNLGVEAVNVEIPEKDLEITTS 244

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R+ G GGQ+VN  ++AVR+ HIPTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R 
Sbjct: 245 RSGGKGGQNVNKVETAVRVVHIPTGLAVRCTQERSQLQNKEKALALLKAKLLVILTEQRA 304

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +          E  WG QIR+YV  PYQMVKDLRTN+E +    V+DGDL+ F++A L  
Sbjct: 305 KEIAQIRGDMVEAAWGNQIRNYVFHPYQMVKDLRTNVETSDVGAVMDGDLNGFIEAYLRQ 364


>gi|312865919|ref|ZP_07726140.1| peptide chain release factor 2 [Streptococcus downei F0415]
 gi|311098323|gb|EFQ56546.1| peptide chain release factor 2 [Streptococcus downei F0415]
          Length = 326

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 147/325 (45%), Positives = 209/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L        ++++   ++ + LE+   E+D S+  +  
Sbjct: 1   MTEPDFWDDNITAQKTSQELNELKQTYDTFNQMEELSEESELYLEM--LEEDASVQGDLE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L ++   +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMY R+   + 
Sbjct: 59  ETLAKLDKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYQRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GP+AYG LK E GVHRLVRISP+DS  RRHTSF+SI
Sbjct: 119 FKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSI 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVEIRDDDLKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY+LE +K+ +  +  +  K EI WG QIRSYV  PY MVKD RT 
Sbjct: 239 YGNRDRAMKMLQAKLYQLEQEKKAQEVSALKGDKKEITWGSQIRSYVFTPYTMVKDHRTG 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DGD+D F+ A L  +
Sbjct: 299 YEVAQVDKVMDGDIDGFIDAYLKWR 323


>gi|220913146|ref|YP_002488455.1| peptide chain release factor 2 [Arthrobacter chlorophenolicus A6]
 gi|254790908|sp|B8HBH8|RF2_ARTCA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|219860024|gb|ACL40366.1| peptide chain release factor 2 [Arthrobacter chlorophenolicus A6]
          Length = 371

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 138/352 (39%), Positives = 216/352 (61%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L      +  + D +   + ++ L+ +  +P LW +   A+ +     H  + +  +  +
Sbjct: 13  LRATYESIERVTDMEALREDIAELSERAGEPDLWDDPAAAQKITSRLSHRQSELERLTTL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             R+ D  +L+EL  +E D   + E +  L+ I+  ++  +  +LLSGE D  +A + + 
Sbjct: 73  ASRIDDLEVLVELGQDEGDADSMGEAAAELESIQKALKNLEVVTLLSGEYDEREAVVSIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A ML+RMY RWAE+  + T  ++    EEAG+KSAT  +K P A+G L 
Sbjct: 133 AGAGGVDAADFAEMLMRMYLRWAERHGYPTTVMDTSYAEEAGLKSATFEVKAPYAFGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++ +  I+I +++ R+D +R+SG GGQ 
Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDSIDIPDNEIRVDVFRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTGVVV  Q E+SQ +N+A A  +L+++L  L+ ++ +         
Sbjct: 253 VNTTDSAVRLTHIPTGVVVSMQNEKSQLQNRAAAMRVLQSRLLLLKKEQEDAEKKALAGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  WG Q+RSYVL PYQMVKDLRT  E  + S V DG++DDF+ A +  +
Sbjct: 313 -VKASWGDQMRSYVLNPYQMVKDLRTEHEVGNTSAVFDGEIDDFIDAGIRWR 363


>gi|28210088|ref|NP_781032.1| peptide chain release factor 2 [Clostridium tetani E88]
 gi|28202524|gb|AAO34969.1| bacterial peptide chain release factor 2 [Clostridium tetani E88]
          Length = 325

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 158/324 (48%), Positives = 223/324 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++P  W+++  A+ + ++ + + + +     +++R+ D+L+L+EL  EE+D S   E  
Sbjct: 1   MQEPDFWEDIKRAQEVTQQEKLIKDRLEKFDSLENRIEDSLVLIELMKEEEDISSAGEVL 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L  +K E+E  + E LLSGE D N+A + +HAG GGT++QDW  MLLRMYTRWAEK+ 
Sbjct: 61  KELVLLKKEIESFRIEVLLSGEYDRNNAIMTLHAGVGGTDAQDWTEMLLRMYTRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K + L+   G+EAGIKS TL I G  AYG+LK E+GVHR+VRISPY++N +R TSF+S+
Sbjct: 121 YKVDTLDFLPGDEAGIKSVTLKITGDFAYGYLKAEKGVHRIVRISPYNANGKRQTSFASL 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + P + +  +IEI + D ++DTYRASGAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ
Sbjct: 181 ELIPELTEDQDIEIIDDDLKVDTYRASGAGGQHVNKTESAVRITHIPTGIVVQCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H N+  A  ML+AKL EL+  + +E          ++GWG QIRSYV  PY +VKD RT+
Sbjct: 241 HSNRDTALKMLKAKLVELKEAEHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTS 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  + + V+DGD+D F+   L  
Sbjct: 301 AETGNLTAVMDGDIDLFINEYLKA 324


>gi|255091190|ref|ZP_05320668.1| peptide chain release factor 2 [Clostridium difficile CIP 107932]
 gi|255099304|ref|ZP_05328281.1| peptide chain release factor 2 [Clostridium difficile QCD-63q42]
 gi|255305089|ref|ZP_05349261.1| peptide chain release factor 2 [Clostridium difficile ATCC 43255]
 gi|255312847|ref|ZP_05354430.1| peptide chain release factor 2 [Clostridium difficile QCD-76w55]
 gi|255515606|ref|ZP_05383282.1| peptide chain release factor 2 [Clostridium difficile QCD-97b34]
 gi|255648700|ref|ZP_05395602.1| peptide chain release factor 2 [Clostridium difficile QCD-37x79]
 gi|306518820|ref|ZP_07405167.1| peptide chain release factor 2 [Clostridium difficile QCD-32g58]
          Length = 339

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 161/329 (48%), Positives = 232/329 (70%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             K      W +   A+ +++E + L   +   + ++  L D  +L+E+ LEEDD S+ +
Sbjct: 9   EEKMNQQDFWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEDDDSVER 68

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           +   +++ ++ ++   + ++LL+GE D N+A L ++AG GG ++QDWA MLLRMY RW+E
Sbjct: 69  DIEKSIESMEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSE 128

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            + +K + L+I    EAGIK+AT+L++G NAYG+LK E+GVHRLVRISP+D + +RHTSF
Sbjct: 129 SKGYKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSF 188

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +SI V P +D++IE+EI+ SD +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ E
Sbjct: 189 ASIDVTPELDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNE 248

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQH NK +A  +L AKL EL+  +++E     +   ++I WG QIRSYV QPY++VKD 
Sbjct: 249 RSQHLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWGSQIRSYVFQPYKLVKDH 308

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           RTN E  +   V++G++D F+   L + K
Sbjct: 309 RTNAEFGNVDSVMNGNIDLFINEYLKMNK 337


>gi|224438340|ref|ZP_03659267.1| peptide chain release factor 2 [Helicobacter cinaedi CCUG 18818]
 gi|313144782|ref|ZP_07806975.1| peptide chain release factor 2 [Helicobacter cinaedi CCUG 18818]
 gi|313129813|gb|EFR47430.1| peptide chain release factor 2 [Helicobacter cinaedi CCUG 18818]
          Length = 365

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 174/349 (49%), Positives = 239/349 (68%), Gaps = 2/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +   +  + + D+  +R+  +N        W +  +A  + +E++  +  +S   E+
Sbjct: 13  LQNKAQNIAKILNPDSLQKRMDEINALESHQEFWNDAKKAGEITKEKRKCERILSTYTEM 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D   L E+A  E D S L+   +N++ ++  ++  + E +LSGE DS++A + + 
Sbjct: 73  KAELDDAKELFEIAESEGDSSTLELLFENVESLQSHIQKVEIEVMLSGEFDSSNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+ML RMY RW+E+R FK E L+  DGEEAGIK A  +IKG NAYG+ K
Sbjct: 133 PGAGGTESQDWASMLYRMYLRWSERRGFKVELLDHQDGEEAGIKGAAFIIKGENAYGYAK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ V P + + I+IEI + D RIDTYRASGAGGQH
Sbjct: 193 SENGVHRLVRISPFDANAKRHTSFASVQVSPELSEDIDIEILDKDIRIDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+RITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELE  K+ E   +  + 
Sbjct: 253 VNKTESAIRITHFPTGIVVQCQNDRSQHKNKATAMKMLQSKLYELERLKQSE--GVANAE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K+EIGWG QIRSYVL PYQ VKDLR+N   +    VLDGD+DD +++ L
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDLRSNYATSDTEGVLDGDIDDLIESVL 359


>gi|313906145|ref|ZP_07839494.1| peptide chain release factor 2 [Eubacterium cellulosolvens 6]
 gi|313469032|gb|EFR64385.1| peptide chain release factor 2 [Eubacterium cellulosolvens 6]
          Length = 332

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 164/325 (50%), Positives = 217/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E+P  W N  EA+   +E   L N      ++     D  +++E+  EEDD SI+ E  
Sbjct: 1   MEEPDFWNNPDEAQKQTKELGDLKNDRDTYAKLVSTKEDIEMMIEMGEEEDDESIVPEVR 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L      ++  + ++LLS E D N+A + ++AGAGGTE+ DW  ML RMYTRWAE++ 
Sbjct: 61  EMLDDFIETLDGVRIKTLLSEEYDVNNAIIRLNAGAGGTEAMDWCGMLYRMYTRWAERKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L++ +G+EAGIKS    + G NAYG LK E GVHRLVRISP+++ ++R TSF S 
Sbjct: 121 FAIEELDMQEGDEAGIKSVMFQVNGTNAYGLLKSESGVHRLVRISPFNAQAKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P ++D I+IE+ + D R+DTYR+SGAGGQH+N T SA+RITH+PTG+VV CQ ERSQ
Sbjct: 181 DVMPELNDDIDIEVRDEDIRVDTYRSSGAGGQHINKTSSAIRITHLPTGIVVTCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK +A  +L+AKLY LE +K+ E A       T+I WG QIRSYVLQPY MVKDLRTN
Sbjct: 241 FQNKDKAMQVLKAKLYMLEQEKQAEKAAGIRGEVTDIAWGHQIRSYVLQPYTMVKDLRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            EK   S VLDGDLD F+ A L  +
Sbjct: 301 AEKAQASAVLDGDLDPFINAYLKWQ 325


>gi|223038905|ref|ZP_03609197.1| peptide chain release factor 2 [Campylobacter rectus RM3267]
 gi|222879878|gb|EEF14967.1| peptide chain release factor 2 [Campylobacter rectus RM3267]
          Length = 366

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 166/353 (47%), Positives = 228/353 (64%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ ++  + G+   ++   RL  +     D + WQ++ +A  + +E+  + N ++     
Sbjct: 13  LNTKIENIAGVVKPESIKTRLKEIEELENDQNFWQDIAKAGAIGKEKTKISNILNNFLNA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  + D   L ELA  E+D   +         ++ ++   +   LLSGE D  +A + +H
Sbjct: 73  KSAVDDAKDLYELANSENDEETINSLFAEAGELEDKIVNLEISMLLSGEDDGKNAIVTIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA+ML RMY R+ E+  FK E L+  +GEEAG+K  + ++KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFIVKGVNAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSF+S+ V P +DD IEIEI E D +IDTYRA GAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFTSVMVSPEIDDDIEIEIDEKDLKIDTYRAGGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML+++LYELEL K++E A   E  
Sbjct: 253 VNKTESAVRITHAPTGIVVQCQNDRSQHKNKATAMKMLKSRLYELELMKQQEAAGSIE-- 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K+EIGWG QIRSYVL PYQ VKD R+    +    +LDGD+   ++  L  +K
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAYSQTDAILDGDIKKLIEGVLVSQK 363


>gi|294786673|ref|ZP_06751927.1| peptide chain release factor 2 [Parascardovia denticolens F0305]
 gi|294485506|gb|EFG33140.1| peptide chain release factor 2 [Parascardovia denticolens F0305]
          Length = 377

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 140/353 (39%), Positives = 208/353 (58%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   +   +      D+   +++ L  +   P LW +   A+ +             + E
Sbjct: 12  EARSKYETITQAVGLDSLRGKIAELEKQASAPGLWDDPETAQRVTSNLSASQAEYKRLTE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              RL D   L  L +EE+D    QE    L+++  ++   + ++LL GE D+  A + +
Sbjct: 72  AGQRLDDIDTLYSLGMEEEDEDSKQEAWSELKKLSKDLSDIEIQTLLDGEYDNRAAVVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ DWA ML+RMY RWAE+ ++K + ++    EEAGIKSAT  +  P AYG L
Sbjct: 132 RSGAGGVDAADWAQMLMRMYIRWAERHQYKVQVIDTSYAEEAGIKSATFRVDAPYAYGKL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+NSRR TSF+++ V P+V+ +  I++ +SD R+DTY + G GGQ
Sbjct: 192 SVEGGTHRLVRISPFDNNSRRQTSFAAVEVIPLVEPTDHIDVPDSDVRVDTYMSHGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVR+TH+PTG+VV  Q ERSQ +N+A A  +L+++L  L+ ++          
Sbjct: 252 GVNTTYSAVRLTHLPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLKQEEEAAKKKELAG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT  E + P  V DGD+D F+ A +  +
Sbjct: 312 D-IKASWGDQMRSYVLHPYQMVKDLRTGYETSDPQAVFDGDIDGFIDAGIRWR 363


>gi|190571741|ref|YP_001976099.1| protein chain release factor b [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|190358013|emb|CAQ55482.1| protein chain release factor b [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
          Length = 335

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 170/334 (50%), Positives = 237/334 (70%), Gaps = 1/334 (0%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL  L+++  + +LWQ+  +A+ +++ER  + + I    +++    D++ L+  A++E+D
Sbjct: 2   RLEELDSQASNDNLWQDNQKAQEILKERSKIKHEIESFSKLESDYNDSISLMRSAIDEND 61

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
                E    L +++  ++ K+ ESL +GEAD+N+ +LE+H+GAGGTES DW  ML+RMY
Sbjct: 62  EEFFSEVKGELVKLEKLIKLKETESLFTGEADNNNCFLEIHSGAGGTESNDWTEMLMRMY 121

Query: 142 TRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           TRWAE    FK E +E  DG+  GIKS T+ I G  AYGW K E GVHRLVRISP+D+N 
Sbjct: 122 TRWAEIYHNFKVEVVEKLDGDAVGIKSTTIKIIGEKAYGWAKSESGVHRLVRISPFDANG 181

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           +RHTSF+S+ V PV++DSI+I + E D +IDTYRASGAGGQHVN T+SAVRITHIPTGVV
Sbjct: 182 KRHTSFASVGVTPVIEDSIDIVVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTGVV 241

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
            QCQ  RSQHKNK +A  +L+ +LY++EL+K+E+        K +IGWG QIRSYV+ PY
Sbjct: 242 AQCQNGRSQHKNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGSQIRSYVMHPY 301

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           QMVKDLRT  E  + + V DG++D F+ + L +K
Sbjct: 302 QMVKDLRTGHEVGNINSVFDGNIDCFIVSVLELK 335


>gi|113953765|ref|YP_731847.1| peptide chain release factor 2 [Synechococcus sp. CC9311]
 gi|113881116|gb|ABI46074.1| peptide chain release factor 2, programmed frameshift
           [Synechococcus sp. CC9311]
          Length = 375

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 146/352 (41%), Positives = 208/352 (59%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ +L       D      +   L      P  W +   A+  MR    +   +  + +
Sbjct: 13  ELTDRLGHAQDCLDVPALNAKQQDLEQLAAQPDFWNDQQNAQKQMRRLDEVKAQLQQLVD 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            +  + D    LEL   E D  +L E    L +++  ++  + E LLSGE D   A L +
Sbjct: 73  WRGAIDDGQATLELHELEPDEDLLGEAQQGLNQLRQALDRWELERLLSGEYDKEGAVLSI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGT++QDWA MLLRMYTRWAE +       E+ +GEEAGIKS T+ I+G  AYG+L
Sbjct: 133 NAGAGGTDAQDWAQMLLRMYTRWAEDQGMSVSVNELSEGEEAGIKSTTIEIEGRYAYGYL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E+G HRLVRISP+++N +R TSF+ + V P +D+ +E++I E D  + T R+ GAGGQ
Sbjct: 193 RNEKGTHRLVRISPFNANDKRQTSFAGVEVMPKLDEEVELDIPEKDLEVTTSRSGGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++AVRI H+PTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R         
Sbjct: 253 NVNKVETAVRILHVPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
              E  WG QIR+YV  PYQMVKDLRT  E T    V+DGDL+ F++A L  
Sbjct: 313 DIVEAAWGNQIRNYVFHPYQMVKDLRTQEETTDVQGVMDGDLNPFIQALLRQ 364


>gi|148243347|ref|YP_001228504.1| peptide chain release factor 2 [Synechococcus sp. RCC307]
 gi|147851657|emb|CAK29151.1| Protein chain release factor B [Synechococcus sp. RCC307]
          Length = 349

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 144/339 (42%), Positives = 209/339 (61%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D      R   L      P  W +   A+  MR+   +   +  ++  +  + D    LE
Sbjct: 1   DVPALTARQQDLEQLAAQPDFWDDQNNARKQMRQLDDVKAQLEQLRTWRASVDDAAATLE 60

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           L   E D ++L+E +  LQ ++L ++  + E LLSG  D   A + ++AGAGGT++QDWA
Sbjct: 61  LYDLEPDDALLEEANGGLQELRLALDRWELERLLSGTYDQEGAVISINAGAGGTDAQDWA 120

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            ML+RMYTRWAE R  K    E+ +GEEAGIKS T+ ++G  AYG+L+ E+G HRLVRIS
Sbjct: 121 LMLMRMYTRWAEDRGMKVTVDELSEGEEAGIKSCTIEVEGRYAYGYLRNEKGTHRLVRIS 180

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+++N +R TSF+ + V P +++ +++EI + D  + T R+ GAGGQ+VN  ++AVRI H
Sbjct: 181 PFNANDKRQTSFAGVEVMPKLEEEVDLEIPDKDLEVTTSRSGGAGGQNVNKVETAVRILH 240

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           IPTG+ V+C QERSQ +NK +A  +L++KL  +  ++R            E  WG QIR+
Sbjct: 241 IPTGLAVRCTQERSQLQNKEKAMALLKSKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRN 300

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           YV  PYQMVKDLRTN E T    V+DGDLD F+++ L  
Sbjct: 301 YVFHPYQMVKDLRTNEETTDVQGVMDGDLDPFIQSLLRQ 339


>gi|227499885|ref|ZP_03929978.1| peptide chain release factor RF2 [Anaerococcus tetradius ATCC
           35098]
 gi|227217994|gb|EEI83267.1| peptide chain release factor RF2 [Anaerococcus tetradius ATCC
           35098]
          Length = 333

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 157/330 (47%), Positives = 217/330 (65%), Gaps = 2/330 (0%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             K++ P  W +  +A  +M +       ++  K++++ + DN+ LL+L    D+     
Sbjct: 2   EKKSQSPDFWNDSDKASQIMADLSLKKEDLNEYKKLEEGIRDNVDLLDLVELSDNKEEDT 61

Query: 87  ETSDNLQRI--KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
             +            +  + ++ LSGE D N+ Y+ ++AGAGG E+ DWA+ML RMY R+
Sbjct: 62  VNAVEESLEALYKLADKMKLKTQLSGEYDKNNCYISINAGAGGLEATDWADMLFRMYKRY 121

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
            +   +K E  ++++ E  GIKSATL +KGP AYG+LKGE+GVHRLVRISP+DS SRRHT
Sbjct: 122 FDNVGYKYELKDLNNEEAGGIKSATLHVKGPYAYGYLKGEKGVHRLVRISPFDSQSRRHT 181

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           SF+S+ V+P +DD++EI+I  SD RIDTYRASGAGGQHVN TDSAVRITHIPTGVV   Q
Sbjct: 182 SFASVDVFPELDDNLEIDIDPSDLRIDTYRASGAGGQHVNKTDSAVRITHIPTGVVATSQ 241

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
            ERSQ +NK  A N+L +KL +++ +++ E     +   ++I WG QIRSYV QPY MVK
Sbjct: 242 AERSQIQNKQTAMNLLMSKLVQIKEEEQREKIEDIQGKYSQIAWGSQIRSYVFQPYTMVK 301

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           D RTN E  +   V+DGDL  F+ A LA K
Sbjct: 302 DHRTNYEMGNVEAVMDGDLQGFIDAYLASK 331


>gi|188586825|ref|YP_001918370.1| peptide chain release factor 2 (bRF-2) [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179351512|gb|ACB85782.1| peptide chain release factor 2 (bRF-2) [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 344

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 163/337 (48%), Positives = 221/337 (65%), Gaps = 1/337 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             +RL  L  +  +P  W +   AK + +ERQ L   +  IKE+ +   +  +++EL+ E
Sbjct: 1   MEKRLKELEKQMTEPGFWDDQDRAKKVTQERQELKEHLDEIKELDELKDEVSVMIELSEE 60

Query: 79  EDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           ++      +       + + ++   + +++L    D N+A + +HAGAGGTESQDW  ML
Sbjct: 61  DETDGTNMKEIKQALFQFEEQLSEIRLKNMLKDRYDENNAIISLHAGAGGTESQDWVEML 120

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY RW E R F  E L+   G+EAG+KS T+++KG  A+G+LK E GVHRLVR+SP+D
Sbjct: 121 HRMYIRWMEHRGFNYETLDFLPGDEAGVKSVTMMVKGKYAFGYLKSEAGVHRLVRVSPFD 180

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S+ RRHTSF+S+ V P +DD IEI+I + D +IDTYRASGAGGQHVNTTDSAVRITH PT
Sbjct: 181 SSGRRHTSFASMDVVPEIDDDIEIDIKDDDLKIDTYRASGAGGQHVNTTDSAVRITHHPT 240

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQCQ ERSQHKN+  A  +L+AKL  +E +KR +        K EI WG QIRSYV 
Sbjct: 241 GIVVQCQNERSQHKNREVAMKILKAKLAAIEEEKRRQEQEAMRGDKKEIAWGSQIRSYVF 300

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            PY MVKD RTN+E+ +   VLDG LD F++  L  +
Sbjct: 301 HPYTMVKDHRTNLEEGNADAVLDGKLDHFIQEYLKQR 337


>gi|269795803|ref|YP_003315258.1| peptide chain release factor 2 [Sanguibacter keddieii DSM 10542]
 gi|269097988|gb|ACZ22424.1| bacterial peptide chain release factor 2 (bRF-2) [Sanguibacter
           keddieii DSM 10542]
          Length = 372

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 141/356 (39%), Positives = 220/356 (61%), Gaps = 4/356 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D +    R++ L+ +   P LW +   A+ +          +  I  +
Sbjct: 13  LRGTLATISAVTDPEALKIRIAELSDQASAPDLWDDTDAAQKVTTALSQAQTELDRIVNM 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQR---IKLEVEYKQFESLLSGEADSNDAYL 119
           + R+ D  +L+E+A E D    ++   +  +    I+ ++   +  +LLSGE D+ +A +
Sbjct: 73  ESRIDDLEVLVEMATEGDGADDVETLEEAQKDLDGIRRDLGDLEVRTLLSGEWDAREAVV 132

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + AGAGG ++ D+A ML+RMY RWAE+  + T  L+    EEAG+KSAT  +K P A+G
Sbjct: 133 SIRAGAGGVDAADFAEMLMRMYLRWAERHGYPTAVLDTSYAEEAGLKSATFEVKAPYAFG 192

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  ++I +++ R+D +R+SG G
Sbjct: 193 NLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHVDIPDNEIRVDVFRSSGPG 252

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  LE Q +E+     
Sbjct: 253 GQSVNTTDSAVRLTHIPTGIVVSMQNEKSQIQNRAAAMRVLQSRL-LLERQAQEKAMKKE 311

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +   +  WG Q+RSYVLQPYQMVKDLRT  E  + S V DG++DDF++A +  ++
Sbjct: 312 MAGDVKASWGDQMRSYVLQPYQMVKDLRTEHEVGNTSAVFDGEIDDFIEAGIRWRR 367


>gi|188582408|ref|YP_001925853.1| peptide chain release factor 2 [Methylobacterium populi BJ001]
 gi|179345906|gb|ACB81318.1| peptide chain release factor 2 [Methylobacterium populi BJ001]
          Length = 321

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 219/309 (70%), Positives = 254/309 (82%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD A++ IK+++  L D   L+EL   E D + + E  + ++ ++ E   +Q E
Sbjct: 1   MRERQELDEAVTAIKKLEQDLEDAATLIELGEMEGDQASITEGENAIKAVEKEAASRQVE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWANML RMY RWAE+RKFK E +E+ DGEEAGI
Sbjct: 61  TLLSGEADGFDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKFKVEIVEMTDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K ATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSF+S+WVYPV+DD IEIEI E
Sbjct: 121 KGATLLIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVIDDRIEIEIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYR+SGAGGQHVNTTDSAVRITH PTG+VV CQQERSQHKN+A AWNMLRA+LY
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHNPTGIVVACQQERSQHKNRATAWNMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE AN   +SKT+IGWG QIRSYVLQPYQ+VKDLRT  + T P +VLDGDLD 
Sbjct: 241 EAELKKREEKANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGTQSTDPDEVLDGDLDP 300

Query: 346 FMKATLAIK 354
           FM+A+LA +
Sbjct: 301 FMEASLAQR 309


>gi|226226984|ref|YP_002761090.1| peptide chain release factor 2 [Gemmatimonas aurantiaca T-27]
 gi|226090175|dbj|BAH38620.1| peptide chain release factor 2 [Gemmatimonas aurantiaca T-27]
          Length = 335

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 163/325 (50%), Positives = 220/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +   A+ ++++ + L   +     +Q R+     L EL   E D  +  +  
Sbjct: 1   MADPAFWNDQEHAREIVQQVKVLKGWVEPSDSLQSRIDSARELDELLSLEPDKGMNADLD 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             +QRI  +++  + +SLL G  D  DA LE+ AGAGGTE+QDWA+MLLR+YTRWAE++ 
Sbjct: 61  QEVQRILADLDAFELKSLLRGNDDYRDAQLEISAGAGGTEAQDWASMLLRLYTRWAERKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L++ DGEEAGIK A L IKG  AYG+L+ E GVHRLVRISP+DS +RRHTSF+S+
Sbjct: 121 FDLEVLDLSDGEEAGIKGAVLEIKGQYAYGFLRPESGVHRLVRISPFDSQARRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           +VYPVV++ I IEI E D RID YRASGAGGQHVN T SAVRITHIP+G+V   QQERSQ
Sbjct: 181 FVYPVVNEEINIEIREEDLRIDVYRASGAGGQHVNKTSSAVRITHIPSGIVCASQQERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KNKA A   L+ +LY+LE++K+  +    +++K ++ +G QIRSYV QPY MV D R+ 
Sbjct: 241 FKNKATAMKQLKNRLYQLEIEKQAAVKAAFDANKQDVTFGSQIRSYVFQPYTMVNDHRSE 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           ++      V+DGD+D F+ A L  +
Sbjct: 301 LKIADVQKVMDGDIDPFIHAYLKQE 325


>gi|88803344|ref|ZP_01118870.1| peptide chain release factor RF-2 [Polaribacter irgensii 23-P]
 gi|88780910|gb|EAR12089.1| peptide chain release factor RF-2 [Polaribacter irgensii 23-P]
          Length = 365

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 144/350 (41%), Positives = 219/350 (62%), Gaps = 2/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++ ++  L    + D  +  ++    KT +P  W +  EA++ ++E +     ++  +  
Sbjct: 10  IADRIEKLKSYLEIDKKLIEIANEEEKTTNPGFWDHPKEAEVAIKELRFKKKWVTDYQHA 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
                D ++L E   E D      +           +E  +F ++LS E DS  A +++ 
Sbjct: 70  ITLNDDVIVLYEFYKEGDVAETEMDEQFEKVS--SFLEDIEFRNMLSEEGDSLAATIQIT 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DW  ML RMY+ WAEK+ FK + L    G+ AGIK+ T+ I+G  A+GWLK
Sbjct: 128 AGAGGTESCDWVEMLSRMYSMWAEKQGFKLKTLNYQAGDVAGIKTITIEIEGDFAFGWLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+DSN +RHT+F S++V+PV DDSIEI ++ +D  I T R+SGAGGQ+
Sbjct: 188 GENGVHRLVRISPFDSNGKRHTTFGSVYVFPVADDSIEIAVNPADIEIVTARSSGAGGQN 247

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++ V++TH PTG+ +QC   RSQH N+A A  ML+++LYE+EL+K++      E+ 
Sbjct: 248 VNKVETKVQLTHKPTGIQIQCSNSRSQHDNRATAMKMLKSQLYEIELKKQQATRADIEAG 307

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K +  WG QIR+YV+ PY++VKD+RT  E  +   V+DG+++ F+K+ L 
Sbjct: 308 KLKNEWGSQIRNYVMHPYKLVKDVRTAYETGNVDAVMDGNINPFLKSYLM 357


>gi|223558105|gb|ACM91108.1| peptide chain release factor 2 [uncultured bacterium Rlip2]
          Length = 330

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 166/325 (51%), Positives = 219/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +   A+ L +E   L   +     +  +  D + L E+ +EE D  +  +  
Sbjct: 1   MGAPDFWDDAEAAQALNQELADLKGGVDTYNALVAKTDDLMTLWEMGMEEKDEGVEADVK 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
                +K E+   + E LLSGE D+N+AYLE+HAGAGGTE+QDW  MLLRMY RWAE+  
Sbjct: 61  AEYDSLKNELRSLELELLLSGEYDANNAYLELHAGAGGTEAQDWTQMLLRMYGRWAERHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L++  G+EAG+KS  L +KG NAYG+LK E+GVHRLVRISP+DSN+RRHTSFS+ 
Sbjct: 121 FSVETLDLQPGDEAGVKSVMLFVKGHNAYGYLKSEKGVHRLVRISPFDSNARRHTSFSAC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P ++D+ E+EI   D R+DTYR+SGAGGQH+N T SAVR+TH+PTG+VVQCQ ERSQ
Sbjct: 181 DVMPEMEDAKEVEIDMDDVRVDTYRSSGAGGQHINKTSSAVRMTHMPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+     MLRAKL+ELE +K+EE     E  + +I WG QIRSYV QPY MVKD RT 
Sbjct: 241 IQNREVCLRMLRAKLFELEEKKKEEERAKLEGVQQKIEWGSQIRSYVFQPYTMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DG++D F+++ LA K
Sbjct: 301 EETGNVQAVMDGEIDPFIESFLAAK 325


>gi|254508224|ref|ZP_05120348.1| peptide chain release factor 2 [Vibrio parahaemolyticus 16]
 gi|219548841|gb|EED25842.1| peptide chain release factor 2 [Vibrio parahaemolyticus 16]
          Length = 320

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 168/317 (52%), Positives = 227/317 (71%), Gaps = 1/317 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W     A+ L +ER  L+  +  I +++  + D   LLELA+EE+D     E    L  +
Sbjct: 2   WNEPERAQALGKERSALEAVVETIDQLEQGVEDVDGLLELAVEEEDQETFDEIEPELAEL 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           + ++E  +F  + SG+ D++D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FKTE +
Sbjct: 62  EAKLEKLEFRRMFSGDHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEVI 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E+ +GE AG+K AT+ I G  AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP +
Sbjct: 122 EVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEI 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD+I+I+I+ SD RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK Q
Sbjct: 182 DDNIDIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQ 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A   LRAKL+ELE+QK+       E +K++IGWG QIRSYVL     +KDLRT +E  + 
Sbjct: 242 AMKQLRAKLFELEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNT 300

Query: 336 SDVLDGDLDDFMKATLA 352
             VLDGDLD F++A+L 
Sbjct: 301 QAVLDGDLDKFIEASLK 317


>gi|296452520|ref|ZP_06894217.1| peptide chain release factor RF2 [Clostridium difficile NAP08]
 gi|296881068|ref|ZP_06905011.1| peptide chain release factor RF2 [Clostridium difficile NAP07]
 gi|296258625|gb|EFH05523.1| peptide chain release factor RF2 [Clostridium difficile NAP08]
 gi|296427934|gb|EFH13838.1| peptide chain release factor RF2 [Clostridium difficile NAP07]
          Length = 338

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 160/329 (48%), Positives = 232/329 (70%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             K      W +   A+ +++E + L   +   + ++  L D  +L+E+ LEE+D S+ +
Sbjct: 8   EEKMNKQDFWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEEDDSVER 67

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           +   +++ ++ ++   + ++LL+GE D N+A L ++AG GG ++QDWA MLLRMY RW+E
Sbjct: 68  DIEKSIESMEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSE 127

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            + +K + L+I    EAGIK+AT+L++G NAYG+LK E+GVHRLVRISP+D + +RHTSF
Sbjct: 128 SKGYKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSF 187

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +SI V P +D++IE+EI+ SD +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ E
Sbjct: 188 ASIDVTPELDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNE 247

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQH NK +A  +L AKL EL+  +++E     +   ++I WG QIRSYV QPY++VKD 
Sbjct: 248 RSQHLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWGSQIRSYVFQPYKLVKDH 307

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           RTN E  +   V++G++D F+   L + K
Sbjct: 308 RTNAEFGNVDSVMNGNIDLFINEYLKMNK 336


>gi|291326803|ref|ZP_06125920.2| peptide chain release factor 2 [Providencia rettgeri DSM 1131]
 gi|291312658|gb|EFE53111.1| peptide chain release factor 2 [Providencia rettgeri DSM 1131]
          Length = 320

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 176/318 (55%), Positives = 224/318 (70%), Gaps = 1/318 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W     A+ L +ER  L+  +  I ++   L D   LLELA+E DD     E    L+++
Sbjct: 2   WNEPERAQALGKERSSLEAIVETIDQMTQGLEDVEGLLELAVEADDEDTFNEAEAELEQL 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           + ++E  +F  + SGE DS D Y+++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +
Sbjct: 62  EGKLEQLEFRRMFSGEYDSADCYIDLQAGSGGTEAQDWASMLLRMYLRWAESKGFKTEII 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E  DG+ AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSFSS ++YP V
Sbjct: 122 EESDGDVAGLKSATVKIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEV 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD I+IEI+ +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK Q
Sbjct: 182 DDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQ 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A   L+AKLYELE+QK+       E +K++IGWG QIRSYVL     +KDLRT +E  + 
Sbjct: 242 AMRQLKAKLYELEMQKKNADKQAMEENKSDIGWGSQIRSYVLDD-ARIKDLRTGVETRNT 300

Query: 336 SDVLDGDLDDFMKATLAI 353
             VLDGDLD F++A+L  
Sbjct: 301 QAVLDGDLDKFIEASLKA 318


>gi|220933707|ref|YP_002512606.1| peptide chain release factor 1 [Thioalkalivibrio sp. HL-EbGR7]
 gi|254790905|sp|B8GLA1|RF1_THISH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219995017|gb|ACL71619.1| peptide chain release factor 1 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 361

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 114/346 (32%), Positives = 179/346 (51%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L     +P +  +    + L  E   L+  +   +  +    D     E+
Sbjct: 9   LEGVSERFQELAGLLSEPEVISDNARFRRLSMEYSQLEPVVEAFRRYEGAQADLTAAREM 68

Query: 76  ALEEDDC---SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         E +   +R++      Q   +     D ++ +LE+ AG GG E+  
Sbjct: 69  QKDPDPDLRAMAEDEAATAAERLETLELELQKLLIPKDPHDHSNLFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE + ++ E L   +GE  G K     + G  AY  LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAENQGWQVEILSQSEGEHGGYKEVIARLIGAGAYSRLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P  D+    EI+ +D R+DTYRASGAGGQHVN TDSA+R+
Sbjct: 189 VPATESQGRIHTSAATVAVMPEPDEVEAPEINPADLRVDTYRASGAGGQHVNKTDSAIRL 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ ERSQHKN+A+A ++L AKL+E E  +++       + K+ +G G   
Sbjct: 249 THLPTGIVVECQDERSQHKNRARAMSLLAAKLFEAEQARQQAEQ--SATRKSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N+       V+ GDLD  ++  +   +
Sbjct: 307 ERIRTYNF-PQGRITDHRINLTLYKLDAVMAGDLDPVIEPLINEHQ 351


>gi|304322131|ref|YP_003855774.1| hypothetical protein PB2503_12974 [Parvularcula bermudensis
           HTCC2503]
 gi|303301033|gb|ADM10632.1| hypothetical protein PB2503_12974 [Parvularcula bermudensis
           HTCC2503]
          Length = 315

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 208/309 (67%), Positives = 248/309 (80%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER HL+N I+ +  +Q  L DNL L E+A  E D + + +    L  +K      + E
Sbjct: 1   MQERTHLENQIAALTAMQTELDDNLELAEMAEAEGDDAAVDDIQAALADLKDRAGRAELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD+N+A++E+HAGAGGTES DWANML RMY RWA++   K + +E   GEEAGI
Sbjct: 61  ALLSGEADANNAFVEIHAGAGGTESNDWANMLYRMYVRWAQQHGHKVDIIEEQGGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSS+WVYP +DD+IEIE++E
Sbjct: 121 KSATILVKGINAYGWLKVESGVHRLVRISPYDSNARRHTSFSSVWVYPEIDDNIEIEVAE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCR+DT+RASGAGGQHVNTTDSAVRITH PTG+VVQCQ ERSQHKN+A AWNMLRA+LY
Sbjct: 181 SDCRVDTFRASGAGGQHVNTTDSAVRITHEPTGIVVQCQSERSQHKNRATAWNMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+ELQ+REE AN   +SKT+IGWG QIRSYVLQPYQMVKDLRT +E  SP  VLDGDLD 
Sbjct: 241 EMELQRREEEANAQAASKTDIGWGHQIRSYVLQPYQMVKDLRTGVESPSPDAVLDGDLDA 300

Query: 346 FMKATLAIK 354
           FM A LA +
Sbjct: 301 FMGAALAQR 309


>gi|326203238|ref|ZP_08193103.1| peptide chain release factor 1 [Clostridium papyrosolvens DSM 2782]
 gi|325986496|gb|EGD47327.1| peptide chain release factor 1 [Clostridium papyrosolvens DSM 2782]
          Length = 359

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 122/351 (34%), Positives = 188/351 (53%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD    A  R   ++ K  DP +  N  E K  M+E   L+  +   +E      +   
Sbjct: 1   MFDKLQAAEDRYEEISHKLSDPDVINNQDEYKKYMKEYSDLEEIVQKYREYTKVSKEIEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKL----EVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             EL  +  D    +      Q  +          +   +     D  +  +E+  GAGG
Sbjct: 61  ARELLDQTLDKDFREMVQQEFQEAQEKLEVIKRQLKILIVPKDPNDDKNVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A +L R  T++AEK+++K E ++ +  E  G K     I+G  AY  LK E GV
Sbjct: 121 EEAALFAGVLFRAMTKYAEKKRWKYEIMDSNPTELGGFKEVVFSIEGKGAYSRLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS  ++ V P   + ++++I+ +D RIDTYRASGAGGQH+N TD
Sbjct: 181 HRVQRVPSTESSGRIHTSTITVAVLP-EVEEVDVDINPNDLRIDTYRASGAGGQHINKTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SA+RITH+P+G+VV CQ ERSQHKNK +A  +LR+KLYE+  +++  I  + +  K+++G
Sbjct: 240 SAIRITHMPSGIVVSCQDERSQHKNKDRAMKILRSKLYEIAQEQQ--INEVAQDRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R N+       VLDGDLD+ + A +   +
Sbjct: 298 TGDRSERIRTYNY-PQGRVTDHRINLTLYKLEQVLDGDLDELIDALITTDQ 347


>gi|170743911|ref|YP_001772566.1| peptide chain release factor 2 [Methylobacterium sp. 4-46]
 gi|168198185|gb|ACA20132.1| peptide chain release factor 2 [Methylobacterium sp. 4-46]
          Length = 321

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 212/309 (68%), Positives = 255/309 (82%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MR+R  L+ A++ I+ ++  L D   L+EL   E D + ++E  + ++ ++ E   +Q E
Sbjct: 1   MRDRNDLEEAVASIRRLEQGLEDAATLIELGEMEGDEASIREGEEQIRAVQAEAARRQIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LL+GEAD ND YLEVHAGAGGTESQDWANML RMY RWAE+RK+K + +E  +GEEAGI
Sbjct: 61  TLLAGEADGNDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKYKVDIVEWSEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K ATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSF+S+WVYPVVDD I IE+ E
Sbjct: 121 KGATLLIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVVDDRITIEVKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYR+SGAGGQHVNTTDSAVRITH+PTG+VV CQQERSQHKN+A AWNMLRA+LY
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVACQQERSQHKNRATAWNMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           ELEL+KREE AN   +SKT+IGWG QIRSYVLQPYQ+VKDLRT  + TSP DVLDGD+D 
Sbjct: 241 ELELKKREEKANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGTQSTSPDDVLDGDIDP 300

Query: 346 FMKATLAIK 354
           F++A+LA +
Sbjct: 301 FIEASLAQR 309


>gi|291538249|emb|CBL11360.1| bacterial peptide chain release factor 1 (bRF-1) [Roseburia
           intestinalis XB6B4]
          Length = 358

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 121/351 (34%), Positives = 191/351 (54%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + R   L ++  +P +  + +  + LM+E+  L   ++  KE +    +   
Sbjct: 1   MFDKLEDLLIRFEELMSELSEPDVANDPVRFRKLMKEQSDLTPIVNAYKEYKQCKQNIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGG 127
            L L  EE D  + +   + L   K       +  +   L     D  +  +E+ AGAGG
Sbjct: 61  SLALLEEESDEEMRELAKEELNDSKARVEELEKELKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE R +KTE +E  +    G+KS T ++ G  AY  +K E GV
Sbjct: 121 DEAALFAAEIYRMYLHYAESRNWKTEIMEADETGIGGMKSVTFMLSGQGAYSVMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + ++++I + D RID  RASGAGGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMP-EAEEVDVQIDDKDIRIDVCRASGAGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+  Q E+SQ +NKA+A+ +LR KLY+LE QK        E  K+++G
Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQIQNKAKAFALLRTKLYDLEQQK--AHDAEAELRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R N+       +++GD+ + + A +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRINLTLYKLDKIMNGDIQEIIDACIAADQ 347


>gi|295134177|ref|YP_003584853.1| peptide chain release factor 2 [Zunongwangia profunda SM-A87]
 gi|294982192|gb|ADF52657.1| peptide chain release factor 2 [Zunongwangia profunda SM-A87]
          Length = 365

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 155/351 (44%), Positives = 226/351 (64%), Gaps = 2/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++ +++ L    + +     +     KT DP  W N  EA+  M+  +     ++     
Sbjct: 10  ITTRIDNLQVHLNIEQKQIEIQNEEEKTFDPSFWDNPSEAEEFMKTLKGKKKWVNDYNVA 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L +  +LLE   E +            Q+I   VE  +F+++LS E D   A L++ 
Sbjct: 70  KSGLEELQVLLEFYNEGEAEESD--VIKQYQKILDVVEELEFKNMLSEEGDDLSAVLQIT 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA ML+RMY  WAEK+ FK + L   +G+ AGIK+ TL I+G  A+GWLK
Sbjct: 128 AGAGGTESCDWAQMLMRMYLMWAEKQGFKIKELNYQEGDVAGIKTVTLEIEGDYAFGWLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+DSN++RHTSF+S++VYP+VDD+IEIEI+ +D  I T R+SGAGGQ+
Sbjct: 188 GENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIEINPADIEITTARSSGAGGQN 247

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++ V++ H PTG+ + C + RSQH N+ +A  ML+++LYE+EL+K+ E     E+S
Sbjct: 248 VNKVETKVQLVHHPTGIQISCSETRSQHDNRNRAMQMLKSQLYEIELEKQREQREDIEAS 307

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K +I WG QIR+YV+ PY++VKD+RT  E  +   V+DG +D F+KA L +
Sbjct: 308 KKKIEWGSQIRNYVMHPYKLVKDVRTAEETGNVDSVMDGHIDQFLKAYLMM 358


>gi|237786018|ref|YP_002906723.1| peptide chain release factor 2 [Corynebacterium kroppenstedtii DSM
           44385]
 gi|237758930|gb|ACR18180.1| peptide chain release factor RF-2 [Corynebacterium kroppenstedtii
           DSM 44385]
          Length = 379

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 151/359 (42%), Positives = 219/359 (61%), Gaps = 8/359 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+  L  +  + D D+   ++  L  +  DP LW +   A+ +  +  H+   I  +  +
Sbjct: 12  LNSTLTTIEKVVDVDDLKDQVRELEAQASDPSLWDDPDHAQQVTSKLSHVQAQIKKVTTL 71

Query: 63  QDRLCDNLILLELALE-------EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           + R+ D  ++ ELA +       +      +      + ++ E+E  + +++LSGE D  
Sbjct: 72  RQRVDDMPVMYELADDATEAGDTDAADEAREMADSERETLRHEIESLEVQTMLSGEYDER 131

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +A + + + AGG ++ DWA ML+RMYTRW E+   K +  +I   EEAGIKSAT ++ G 
Sbjct: 132 EAVVNIRSAAGGVDAADWAEMLMRMYTRWTEQHGHKIDVFDISYAEEAGIKSATFIVHGD 191

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
             YG L  EQG HRLVRISP+D+  RR TSF+ + V PVV+ +  I+I E+D R+D YR+
Sbjct: 192 YMYGQLSVEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVVEKTDHIDIDENDVRVDVYRS 251

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L AKL + + ++ +  
Sbjct: 252 SGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLAAKLLDRKREEEQAE 311

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            N  +   +   WG Q+RSYVL PYQMVKDLRTN E   PS VLDGDLD F++A +  +
Sbjct: 312 MNALKGDGSN-SWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDLDGFLEAGIRWR 369


>gi|164687096|ref|ZP_02211124.1| hypothetical protein CLOBAR_00722 [Clostridium bartlettii DSM
           16795]
 gi|164603981|gb|EDQ97446.1| hypothetical protein CLOBAR_00722 [Clostridium bartlettii DSM
           16795]
          Length = 349

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 155/342 (45%), Positives = 231/342 (67%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
           FD  +   ++     +      W +  +A+ ++++   L N I+  + +   L +  IL+
Sbjct: 4   FDIASKQAQIQKYEEEINKQDFWDDNEKAQKILQQNSDLKNIIAEFEGLNSDLEEIEILI 63

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL LEE+D SI  +   ++++++ +++  + ++LL+G+ D N+A L ++AG GG ++QD 
Sbjct: 64  ELGLEEEDESIEHDIEKSIKKLEDKIDEVKIKTLLNGKYDVNNAVLSINAGTGGLDAQDC 123

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A M+LRMY RWA++  FK + L++    EAGIKS TLLI+G NAYG+LK E+GVHR+VRI
Sbjct: 124 AQMILRMYLRWADQNNFKVKTLDMISDPEAGIKSVTLLIQGTNAYGYLKSEKGVHRIVRI 183

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+D++ +RHTSF S+ V P +DD I++EI+ +D +IDTYR+SGAGGQHVN TDSAVRIT
Sbjct: 184 SPFDASGKRHTSFVSVDVTPELDDKIDVEINPNDLKIDTYRSSGAGGQHVNKTDSAVRIT 243

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIPTG+VVQCQ ERSQ  NK  A  ML+ KL  L+  + +E     +   ++I WG QIR
Sbjct: 244 HIPTGIVVQCQNERSQFANKDTAMKMLKGKLIHLKELENKERIEDIQGKYSQITWGSQIR 303

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           SYV QPY++VKD RTN E  +   V+DG+++ F+   L + K
Sbjct: 304 SYVFQPYKLVKDHRTNAEIGNVDSVMDGNINLFINEYLKMNK 345


>gi|298252599|ref|ZP_06976393.1| protein chain release factor B [Gardnerella vaginalis 5-1]
 gi|297532963|gb|EFH71847.1| protein chain release factor B [Gardnerella vaginalis 5-1]
          Length = 378

 Score =  250 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 141/352 (40%), Positives = 212/352 (60%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  + + +    D D+    ++ L  +  +P LW +   A+ +  +     + +  ++ +
Sbjct: 13  VEAKYSSISKALDVDSLKVTIADLEKQAAEPGLWDDSEHAQQVTSKLSAAQSQLKRLQAV 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             R+ D   L+EL  EE D   + E  + L  I  E++  + ++LL GE D+  A + + 
Sbjct: 73  DQRIEDTKTLIELGQEEGDADSMSEAQEELGNIAHELDDMEVQTLLDGEYDARSAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ D+A MLLRMY RWAE+  +KT+ ++    EEAGIKSAT  +  P AYG L 
Sbjct: 133 SGAGGVDAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HR+VRISP+D+  RR T FS++ V P+V+ +  I+I +SD R+DT++ASG GGQ 
Sbjct: 193 VEGGTHRMVRISPFDNQGRRQTGFSAVEVIPLVEATDHIDIPDSDIRVDTFQASGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT SAVRITH+PTG+VV  Q ERSQ +N+A A  +L+++L  L+  +           
Sbjct: 253 VNTTYSAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLKHAEEAAKKKELAGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD+D F++A +  +
Sbjct: 313 -IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWR 363


>gi|255654235|ref|ZP_05399644.1| peptide chain release factor 2 [Clostridium difficile QCD-23m63]
          Length = 339

 Score =  250 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 160/329 (48%), Positives = 232/329 (70%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             K      W +   A+ +++E + L   +   + ++  L D  +L+E+ LEE+D S+ +
Sbjct: 9   EEKMNKQDFWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEEDDSVER 68

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           +   +++ ++ ++   + ++LL+GE D N+A L ++AG GG ++QDWA MLLRMY RW+E
Sbjct: 69  DIEKSIESMEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSE 128

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            + +K + L+I    EAGIK+AT+L++G NAYG+LK E+GVHRLVRISP+D + +RHTSF
Sbjct: 129 SKGYKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSF 188

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +SI V P +D++IE+EI+ SD +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ E
Sbjct: 189 ASIDVTPELDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNE 248

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQH NK +A  +L AKL EL+  +++E     +   ++I WG QIRSYV QPY++VKD 
Sbjct: 249 RSQHLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWGSQIRSYVFQPYKLVKDH 308

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           RTN E  +   V++G++D F+   L + K
Sbjct: 309 RTNAEFGNVDSVMNGNIDLFINEYLKMNK 337


>gi|168215798|ref|ZP_02641423.1| peptide chain release factor 2 [Clostridium perfringens NCTC 8239]
 gi|182382266|gb|EDT79745.1| peptide chain release factor 2 [Clostridium perfringens NCTC 8239]
          Length = 323

 Score =  250 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 151/322 (46%), Positives = 216/322 (67%), Gaps = 1/322 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++   W +V +A+ + +E + + + I   K + +R+ D  +L EL  E D+ +  +   
Sbjct: 1   MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKELMEENDEETAQE-II 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +  E++  + E++LSGE D NDA L +H G GG+++ DW  MLLRMYTRW EK+ 
Sbjct: 60  SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  E ++   G+EAG+KS TL +KG  AYG+LK E+G+HRLVRISP+++N +R TSF+S+
Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +    +IEI+  D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ
Sbjct: 180 EVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             N+  A  ML++KL EL+ +  +E          ++GWG QIRSYV  PY MVKD RTN
Sbjct: 240 FSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRTN 299

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E ++ + V+DGD+D+F+ A L
Sbjct: 300 FETSNVNGVMDGDIDNFIIAYL 321


>gi|290580262|ref|YP_003484654.1| putative peptide chain release factor [Streptococcus mutans NN2025]
 gi|254997161|dbj|BAH87762.1| putative peptide chain release factor [Streptococcus mutans NN2025]
          Length = 325

 Score =  250 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 145/325 (44%), Positives = 209/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L         +Q+   +  +L E+  E+D   +  E  
Sbjct: 1   MTEPDFWDDNIAAQKTSQELNELKLKYETFNSMQELSDETELLQEMLEEDDS--LQGELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           ++L ++   +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  EDLVKLDKIMTSYEMTLLLSEPYDANNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK + L+   G+EAGIKS  L  +GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVDVLDYQAGDEAGIKSVALSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIP+G+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVVASTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+ +  +  +  K EI WG QIRSYV  PY MVKD RTN
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E +    V+DG+LD F+ A L  +
Sbjct: 299 YEVSQVDRVMDGELDGFIDAFLKWR 323


>gi|255323494|ref|ZP_05364625.1| peptide chain release factor 2 [Campylobacter showae RM3277]
 gi|255299531|gb|EET78817.1| peptide chain release factor 2 [Campylobacter showae RM3277]
          Length = 366

 Score =  250 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 166/353 (47%), Positives = 228/353 (64%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ ++  + G+   ++   RL  +     D + WQ++ +A  + +E+  + N ++     
Sbjct: 13  LNTKVENIAGVVKPESIKARLKEIEEMENDQNFWQDIAKAGAIGKEKTKISNILNNFLNA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  + D   L ELA  E+D   +         ++ ++   +   LLSGE D  +A + +H
Sbjct: 73  KSAVDDAKELYELANSENDEETINSLFAEADELEDKIVNLEISMLLSGEDDGKNAIVTIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA+ML RMY R+ E+  FK E L+  +GEEAG+K  + ++KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFIVKGVNAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSF+S+ V P +DD IEIEI E D +IDTYRA GAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFTSVMVSPEIDDDIEIEIDEKDLKIDTYRAGGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML+++LYELEL K++E A   E  
Sbjct: 253 VNKTESAVRITHAPTGIVVQCQNDRSQHKNKATAMKMLKSRLYELELMKQQEAAGSIE-- 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K+EIGWG QIRSYVL PYQ VKD R+    +    +LDGD+   ++  L  +K
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAYSQTDAILDGDIKKLIEGVLVSQK 363


>gi|229817216|ref|ZP_04447498.1| hypothetical protein BIFANG_02476 [Bifidobacterium angulatum DSM
           20098]
 gi|229785005|gb|EEP21119.1| hypothetical protein BIFANG_02476 [Bifidobacterium angulatum DSM
           20098]
          Length = 373

 Score =  250 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 140/351 (39%), Positives = 209/351 (59%), Gaps = 1/351 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   +    D D    +++ L  +  +P LW +   A+ +        + +  +    
Sbjct: 14  RAKYGSIAEALDMDRLKAQIAELEQQAAEPGLWDDPENAQKVTSRLSAAQSQLKRLNSAS 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            R+ D   L+EL  EE+D   L E  + +++I+ +++  + ++LL GE D   A + + +
Sbjct: 74  QRIDDVETLVELGQEEEDADTLAEAQEEVKKIQSDLDDMEIQTLLDGEYDERSAVVTIRS 133

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGG ++ D+A MLLRMY R+ E+  FK + ++    EEAGIKSAT  +  P AYG L  
Sbjct: 134 GAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSV 193

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HRLVRISP+D+  RR TSF+++ V P+V+ +  I+I +SD R+DTY +SG GGQ V
Sbjct: 194 EGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDSDIRVDTYCSSGPGGQGV 253

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTT SAVRITH+PTG+VV  Q ERSQ +N+A A  +L+++L  L  ++  +         
Sbjct: 254 NTTYSAVRITHLPTGLVVTMQDERSQIQNRAAAMAVLQSRLLVLRHEEEAKKKKELAGD- 312

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +  WG Q+RSYVL PYQMVKDLRT  E +    V DGDLD F++A +  +
Sbjct: 313 IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDLDGFIQAGIRWR 363


>gi|219684785|ref|ZP_03539727.1| peptide chain release factor 2 [Borrelia garinii PBr]
 gi|219671730|gb|EED28785.1| peptide chain release factor 2 [Borrelia garinii PBr]
          Length = 350

 Score =  250 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 148/347 (42%), Positives = 214/347 (61%), Gaps = 4/347 (1%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG FD      ++     +    + W +   A+ +++ +  L N I   +E+ +++ 
Sbjct: 5   KAFGGSFDKKEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIK 64

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   L       ++   +         ++ + +     S    E D N+A+L +H+GAGG
Sbjct: 65  DLSDL---CEIVENEKDINSLEIEFNVLEKQYKDLLTISYFKEELDINNAFLTIHSGAGG 121

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+
Sbjct: 122 TEACDWVTMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGI 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRL+RISP+D+  +RHTSF+S++V PV+D+ IEI I   D RIDTYRASGAGGQHVN T 
Sbjct: 181 HRLIRISPFDAAKKRHTSFASVFVDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHVNKTS 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K ++     +  K EI 
Sbjct: 241 SAVRITHIETGIVTQSQSDRSQHKNKDMAMKVLKSRLYEYYKNKEDKKNKSKQELKKEIS 300

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L  K
Sbjct: 301 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 347


>gi|323135929|ref|ZP_08071012.1| peptide chain release factor 2 [Methylocystis sp. ATCC 49242]
 gi|322399020|gb|EFY01539.1| peptide chain release factor 2 [Methylocystis sp. ATCC 49242]
          Length = 322

 Score =  250 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 203/309 (65%), Positives = 247/309 (79%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRER  L+  +  I ++   L D L L+EL  E  D    +E  + L+ +  + + +Q E
Sbjct: 1   MRERTQLEEQMGAIDKLSRDLEDALTLVELGEEAGDEDTEKEGVEALKAVLKDAQRRQIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +L SGEAD ND ++E+H+GAGGTESQDWA ML RMY RWAE++KFK E +E   GEEAGI
Sbjct: 61  ALFSGEADGNDTFIEIHSGAGGTESQDWARMLFRMYARWAERKKFKVEVIEETAGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KS TLL+KG NA+GW K E GVHRLVRISP+DSN+RRHTSF+S+WVYPVVDD IE+ I+E
Sbjct: 121 KSGTLLVKGHNAHGWAKTESGVHRLVRISPFDSNARRHTSFASVWVYPVVDDRIEVNINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYR+SGAGGQHVNTTDSA+RITHIPTG+VV CQ ERSQHKN+A AWNMLRA+LY
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAIRITHIPTGIVVACQAERSQHKNRATAWNMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           ELEL+KRE  AN   +SKT+IGWG QIRSYVLQPYQ+VKDLRT +   +PS+VLDG+LDD
Sbjct: 241 ELELEKREAEANKAAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVTSGTPSEVLDGELDD 300

Query: 346 FMKATLAIK 354
           FM+A+LA +
Sbjct: 301 FMQASLAQR 309


>gi|240147055|ref|ZP_04745656.1| peptide chain release factor 1 [Roseburia intestinalis L1-82]
 gi|257200778|gb|EEU99062.1| peptide chain release factor 1 [Roseburia intestinalis L1-82]
 gi|291535754|emb|CBL08866.1| bacterial peptide chain release factor 1 (bRF-1) [Roseburia
           intestinalis M50/1]
          Length = 357

 Score =  250 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 121/351 (34%), Positives = 191/351 (54%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + R   L ++  +P +  + +  + LM+E+  L   ++  KE +    +   
Sbjct: 1   MFDKLEDLLIRFEELMSELSEPDVANDPVRFRKLMKEQSDLTPIVNAYKEYKQCKQNIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGG 127
            L L  EE D  + +   + L   K       +  +   L     D  +  +E+ AGAGG
Sbjct: 61  SLALLEEESDEEMRELAKEELNDSKARVEELEKELKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE R +KTE +E  +    G+KS T ++ G  AY  +K E GV
Sbjct: 121 DEAALFAAEIYRMYLHYAESRNWKTEIMEADETGIGGMKSVTFMLSGQGAYSVMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + ++++I + D RID  RASGAGGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMP-EAEEVDVQIDDKDIRIDVCRASGAGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+  Q E+SQ +NKA+A+ +LR KLY+LE QK        E  K+++G
Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQIQNKAKAFALLRTKLYDLEQQK--AHDAEAELRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R N+       +++GD+ + + A +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRINLTLYKLDKIMNGDIQEIIDACIAADQ 347


>gi|42562784|ref|NP_176032.2| peptide chain release factor, putative [Arabidopsis thaliana]
 gi|332195261|gb|AEE33382.1| Peptide chain release factor 2 [Arabidopsis thaliana]
          Length = 482

 Score =  250 bits (637), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 158/351 (45%), Positives = 222/351 (63%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +++ +  +     W   + RL  L+ +     LW +   A  + RE   L   +  +   
Sbjct: 122 IAQSIQVIKRRLQWKKLLVRLKVLSAELNKSDLWDDPTHAGKISREHGSLTGKMKGVMTF 181

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L +++ +L+LA EE+D  +  ET   L  ++   + K+ E+LLS + D    Y+EV 
Sbjct: 182 ERELLEHIDMLKLAKEENDSELESETLKALIDMRRVSKEKELEALLSADNDPCSCYIEVQ 241

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA M++ MY  WA++RKF    ++   GE AGIK AT+ + G  AYG+ K
Sbjct: 242 AGAGGTESNDWAAMVMEMYKTWAQRRKFSVTVVDEAPGEIAGIKRATIKVNGEYAYGYAK 301

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+DS  RRHTSF+++ V P+  D S  +EI++SD RI+ +R+ GAGGQ
Sbjct: 302 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGSTRVEINDSDLRIERFRSGGAGGQ 361

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H NTTDSAVRI HIPTG+   CQ ERSQH NKA A  +L+++L +LE+ ++  +      
Sbjct: 362 HANTTDSAVRIVHIPTGITATCQNERSQHSNKASAMAVLQSRLDQLEMARQTAMNAQHTQ 421

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           S TEI WG QIR+YVL PY+MVKDLRTN E + P  VL+GDLD F+ + L+
Sbjct: 422 SLTEISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSFLS 472


>gi|169347339|ref|ZP_02866277.1| hypothetical protein CLOSPI_00054 [Clostridium spiroforme DSM 1552]
 gi|169293956|gb|EDS76089.1| hypothetical protein CLOSPI_00054 [Clostridium spiroforme DSM 1552]
          Length = 367

 Score =  249 bits (636), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 158/346 (45%), Positives = 219/346 (63%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +       D ++  + +  L   TE  + W +  +AK+   +   +   +     +   L
Sbjct: 17  IEEFYRSIDIESYRREIEGLTIVTEQDNFWDDTNKAKITYDKLNKMKKIVDQYDVLATTL 76

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            +     EL    ++   L+    +  + + +++  +   LLSGE D+ +A +E+H GAG
Sbjct: 77  NNLDETYELVKSSEEVEFLEILESDYLKFQEDLDKFEKMMLLSGEHDNLNAIVEIHPGAG 136

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTESQDWA ML RMY R+A ++ +K E L+  DG+ AGIKS T+LIKG + YG LK E+G
Sbjct: 137 GTESQDWAEMLFRMYQRYASRKDWKVEVLDYLDGDVAGIKSVTMLIKGEDVYGHLKAEKG 196

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR+SP+DS  RRHTSF+S+ V P  ++ IEI+I   D +IDTYRASGAGGQH+N T
Sbjct: 197 VHRLVRLSPFDSAKRRHTSFASVDVMPEFNNEIEIDIKNEDLKIDTYRASGAGGQHINKT 256

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPT +VV CQ +RSQ KN+ QA  ML++KLY+L L+K+       +  + EI
Sbjct: 257 DSAVRITHIPTNIVVTCQSQRSQIKNREQAMIMLKSKLYQLMLEKQASELKELKGEQKEI 316

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            WG QIRSYVL PY +VKD R+N E ++P  VLDGDLD F+ A L 
Sbjct: 317 AWGSQIRSYVLHPYSLVKDNRSNYESSNPKAVLDGDLDGFIYAYLK 362


>gi|319935038|ref|ZP_08009481.1| peptide chain release factor 2 [Coprobacillus sp. 29_1]
 gi|319810056|gb|EFW06425.1| peptide chain release factor 2 [Coprobacillus sp. 29_1]
          Length = 371

 Score =  249 bits (636), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 162/347 (46%), Positives = 218/347 (62%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           LN L    D +   + +  L  +T D H W N  +AK +  +   +        ++   L
Sbjct: 17  LNELFVSIDIEGLKREIEGLTVQTLDEHFWNNQEQAKKIYNQLNEMKKTTDTYDDLVSSL 76

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D     +   E +D    +    + +  +  +   +   L SGE D ++A +E+H GAG
Sbjct: 77  NDLDETYDYVKETEDTDFKEALDQDYELFEKHLNDFEKTLLFSGEYDHHNAIVEIHPGAG 136

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTESQDWA ML+RMY R+ +K+ FK E L+  DGEEAG+KS TL   G NAYG LK E+G
Sbjct: 137 GTESQDWAAMLMRMYQRYGDKKDFKVEVLDYLDGEEAGLKSVTLRFIGYNAYGHLKAEKG 196

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+DS+ RRHTSF+S+ V P  D+ IEIEI ++D RIDTYRASGAGGQH+N T
Sbjct: 197 VHRLVRISPFDSSKRRHTSFASVDVMPEFDNDIEIEIDQNDLRIDTYRASGAGGQHINKT 256

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSA+RITHIPT +VV CQ +RSQ +N+ QA  ML++KLY++ L+++    +  +  +  I
Sbjct: 257 DSAIRITHIPTHIVVTCQSQRSQIQNREQALIMLKSKLYQVMLEEQASKLSDIKGEQKAI 316

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            WG QIRSYVL PY MVKD R+  E  +P  +LDGDLDD + A L  
Sbjct: 317 EWGSQIRSYVLHPYSMVKDNRSGYESNNPKAILDGDLDDCIYAYLKA 363


>gi|295105719|emb|CBL03262.1| peptide chain release factor 2 [Gordonibacter pamelaeae 7-10-1-b]
          Length = 363

 Score =  249 bits (636), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 145/352 (41%), Positives = 210/352 (59%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++ ++    G    D+    L+ L+ +   P  W +   A+ + ++  +L   I    E 
Sbjct: 11  MAARVTDAHGFLHIDDKTAELAKLDEEIAAPGFWDDAAHAQGVSKQASNLRETIREYDEA 70

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D    LELA E++  +   + +       L+    +  S  S   D  DA L V+
Sbjct: 71  AALLEDARAALELAGEDEAFAAEADDALARLSDLLDAL--EITSWFSERFDGGDAILTVN 128

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            G+GG E+QDW +ML RMY R+AEK+ +K   L++  GE  G+  AT+ I+G NA+G LK
Sbjct: 129 PGSGGLEAQDWTDMLYRMYVRYAEKKDWKVTILDVVPGEGIGLDKATIQIEGRNAFGMLK 188

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP D   RRHT+F+ + V PV+ D IE++++ +D R+D YR+SG GGQ 
Sbjct: 189 SENGVHRLVRISPTDDKKRRHTTFAGVEVLPVLPDDIEVDLNPADVRVDVYRSSGPGGQC 248

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPT +VV CQ E+SQ +NK  A+ +L+AKLYE E QKR +        
Sbjct: 249 VNTTDSAVRLTHIPTNIVVTCQNEKSQLQNKEAAFRVLKAKLYEREEQKRAQELAELRGD 308

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + +  +G QIR+YVL PYQMVKD+R+ +E  +   VLDGDL++F+      +
Sbjct: 309 RMDNTFGSQIRNYVLYPYQMVKDVRSGVETGNVDAVLDGDLEEFVIGYHKWR 360


>gi|291295687|ref|YP_003507085.1| LigA [Meiothermus ruber DSM 1279]
 gi|290470646|gb|ADD28065.1| LigA [Meiothermus ruber DSM 1279]
          Length = 365

 Score =  249 bits (636), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 143/352 (40%), Positives = 203/352 (57%), Gaps = 5/352 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L  L G  D      RL  L+ +  DP LW +   A+ + +E   L  A+   + +
Sbjct: 6   LEHRLEALRGYLDIAGKEARLKELDRQINDPSLWNDPAHARKISQEAARLRKAVEGYRRL 65

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L   L L      E+   +  E     + ++        ++LL      N A + + 
Sbjct: 66  ESDLQGLLELWPELSPEEREQMQPELERAGRELEELYH----QTLLGFPYAENAAIVTIK 121

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTE+ DWA ML RMYTR+AE++ F  E +++  G EAGI  A  +++G NAYG L 
Sbjct: 122 PGAGGTEACDWAQMLYRMYTRFAERKGFSLELVDLEPGAEAGIDQAQFIVRGENAYGLLS 181

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+++  +R TSF+++ V P VD+S++I+I+  D RID  R+ G GGQ 
Sbjct: 182 AEAGVHRLVRPSPFNAQGKRQTSFAAVEVMPEVDESVDIQIAPEDLRIDVMRSQGKGGQG 241

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+ H+PTG+ V+CQ  RSQ KNK  A N+LR+KL+E+E +K++E     +  
Sbjct: 242 VNTTDSAVRVVHLPTGIFVKCQVTRSQQKNKEMALNILRSKLFEIEWKKKQEELARLKGE 301

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              I WG QIRSYVL     +KD RT   +  P +VLDGDL+  + A L  K
Sbjct: 302 SRPIEWGSQIRSYVLDKQ-YIKDHRTGEMRHDPENVLDGDLESLIWAGLEWK 352


>gi|126697716|ref|YP_001086613.1| peptide chain release factor 2 [Clostridium difficile 630]
 gi|115249153|emb|CAJ66964.1| Peptide chain release factor 2 (RF-2) [Clostridium difficile]
          Length = 328

 Score =  249 bits (636), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 160/326 (49%), Positives = 231/326 (70%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
                 W +   A+ +++E + L   +   + ++  L D  +L+E+ LEEDD S+ ++  
Sbjct: 1   MNQQDFWNDNEVAQRVLQENKSLKETLEEYESLKSLLEDIEVLIEIGLEEDDDSVERDIE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +++ ++ ++   + ++LL+GE D N+A L ++AG GG ++QDWA MLLRMY RW+E + 
Sbjct: 61  KSIESMEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSESKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K + L+I    EAGIK+AT+L++G NAYG+LK E+GVHRLVRISP+D + +RHTSF+SI
Sbjct: 121 YKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSFASI 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D++IE+EI+ SD +IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ ERSQ
Sbjct: 181 DVTPELDENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK +A  +L AKL EL+  +++E     +   ++I WG QIRSYV QPY++VKD RTN
Sbjct: 241 HLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWGSQIRSYVFQPYKLVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355
            E  +   V++G++D F+   L + K
Sbjct: 301 AEFGNVDSVMNGNIDLFINEYLKMNK 326


>gi|308235215|ref|ZP_07665952.1| peptide chain release factor 2 [Gardnerella vaginalis ATCC 14018]
 gi|311114816|ref|YP_003986037.1| peptide chain release factor RF2 [Gardnerella vaginalis ATCC 14019]
 gi|310946310|gb|ADP39014.1| peptide chain release factor RF2 [Gardnerella vaginalis ATCC 14019]
          Length = 380

 Score =  249 bits (636), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 140/352 (39%), Positives = 214/352 (60%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  + + +    D ++    ++ L  +  +P LW +   A+ +  +     + +  ++ +
Sbjct: 13  VEAKYSLISKALDVNSLKTAIADLEKQASEPGLWDDSDHAQQVTSKLSAAQSQLKRLQAV 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D   L+EL  EE+D   + E  + L  I  E++  + ++LL GE D+  A + + 
Sbjct: 73  EQRIEDTKTLIELGQEEEDADSMSEAQEELGSIAHELDDMEVQTLLDGEYDARAAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ D+A MLLRMY RWAE+  +KT+ ++    EEAGIKSAT  +  P AYG L 
Sbjct: 133 SGAGGVDAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HR+VRISP+D+  RR T FS++ V P+V+ +  I+I +SD R+DT++ASG GGQ 
Sbjct: 193 VEGGTHRMVRISPFDNQGRRQTGFSAVEVIPLVEATDHIDIPDSDIRVDTFQASGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT SAVRITH+PTG+VV  Q ERSQ +N+A A  +L+++L  L+  +           
Sbjct: 253 VNTTYSAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLKHAEEAAKKKELAGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD+D F++A +  +
Sbjct: 313 -IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWR 363


>gi|296118845|ref|ZP_06837421.1| peptide chain release factor 2 [Corynebacterium ammoniagenes DSM
           20306]
 gi|295968334|gb|EFG81583.1| peptide chain release factor 2 [Corynebacterium ammoniagenes DSM
           20306]
          Length = 367

 Score =  249 bits (636), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 152/352 (43%), Positives = 215/352 (61%), Gaps = 4/352 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  L  +  + D     +R+  L  +  DP LW +   A+ +  E       +  +  +
Sbjct: 12  LSATLTTIEKVMDPRAMEERVRELEAQAGDPSLWDDPDHAQKVTSELSSTQAKLRKLSAL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  ++ EL    ++        D L  ++  VE  +  ++LSG+ D  +A + + 
Sbjct: 72  RGRLEDLPVMYEL---AEEEGDASLADDELDAVRDAVETLEVTTMLSGDYDQREAVINIR 128

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ DWA ML+RMYTRWAEK   K +  +I   EEAGIKSAT ++ G   YG L 
Sbjct: 129 SGAGGVDAADWAEMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGTLS 188

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVR+SP+D+ +RR TSF+ + V PVV+ +  IEI +S+ R+D YR+SG GGQ 
Sbjct: 189 VEQGAHRLVRLSPFDNQNRRQTSFAEVEVLPVVEQTDSIEIPDSEVRVDVYRSSGPGGQS 248

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG++V CQ E+SQ +NKA A  +L+AKL E + Q+     +   + 
Sbjct: 249 VNTTDSAVRLTHVPTGIMVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAEMDALGAG 308

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                WG Q+RSYVL PYQMVKDLRTN E   PS VL GD+DDF++A +  +
Sbjct: 309 -GNASWGNQMRSYVLHPYQMVKDLRTNHEVGDPSKVLGGDIDDFLEAGIRWR 359


>gi|227546362|ref|ZP_03976411.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|317482557|ref|ZP_07941572.1| peptide chain release factor 2 [Bifidobacterium sp. 12_1_47BFAA]
 gi|227213343|gb|EEI81215.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|316915979|gb|EFV37386.1| peptide chain release factor 2 [Bifidobacterium sp. 12_1_47BFAA]
          Length = 374

 Score =  249 bits (636), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 138/353 (39%), Positives = 205/353 (58%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   +   +    D D     +  L T+   P LW +   A+ +       ++ +  +  
Sbjct: 12  EARAKYESIAKALDVDRLKADIKDLETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNS 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              R+ D   L+EL  EE D   L E    +  I+ +++  + ++LL GE D   A + +
Sbjct: 72  ASQRIDDVETLVELGHEEGDQDSLDEAQGEIGEIQKDLDQMEIQTLLDGEYDERSAVVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY R+ E+  FK + ++    EEAGIKSAT  +  P AYG L
Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+V+ +  I+I ++D R+DTY +SG GGQ
Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVRITH+PTG+VV  Q ERSQ +N+A A  +L+++L  L  ++  +       
Sbjct: 252 GVNTTYSAVRITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVLRHEEEAKKKKELAG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD++ F++A +  +
Sbjct: 312 D-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINAFIEAGIRWR 363


>gi|168205594|ref|ZP_02631599.1| peptide chain release factor 2 [Clostridium perfringens E str.
           JGS1987]
 gi|169344216|ref|ZP_02865198.1| peptide chain release factor 2 [Clostridium perfringens C str.
           JGS1495]
 gi|169297675|gb|EDS79775.1| peptide chain release factor 2 [Clostridium perfringens C str.
           JGS1495]
 gi|170662903|gb|EDT15586.1| peptide chain release factor 2 [Clostridium perfringens E str.
           JGS1987]
          Length = 323

 Score =  249 bits (636), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 151/322 (46%), Positives = 217/322 (67%), Gaps = 1/322 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++   W +V +A+ + +E + + + I   K + +R+ D  +L EL  E D+ +  +   
Sbjct: 1   MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKELMEENDEETAKE-II 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +  E++  + E++LSGE D NDA L +H G GG+++ DW  MLLRMYTRW EK+ 
Sbjct: 60  SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  E ++   G+EAG+KS TL +KG  AYG+LK E+G+HRLVRISP+++N +R TSF+S+
Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +    +IEI+  D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ
Sbjct: 180 EVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             N+  A  ML++KL EL+ +  +E          ++GWG QIRSYV  PY MVKD RTN
Sbjct: 240 FSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRTN 299

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
           +E ++ + V+DGD+D+F+ A L
Sbjct: 300 VETSNVNGVMDGDIDNFIIAYL 321


>gi|168213727|ref|ZP_02639352.1| peptide chain release factor 2 [Clostridium perfringens CPE str.
           F4969]
 gi|170714817|gb|EDT26999.1| peptide chain release factor 2 [Clostridium perfringens CPE str.
           F4969]
          Length = 323

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 151/322 (46%), Positives = 218/322 (67%), Gaps = 1/322 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++   W +V +A+ + +E + + + I   K + +R+ D  +L EL  E D+ +  +   
Sbjct: 1   MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKELMEENDEETAKE-II 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + ++ +  E++  + E++LSGE D NDA L +H G GG+++ DW  MLLRMYTRW EK+ 
Sbjct: 60  NEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  E ++   G+EAG+KS TL +KG  AYG+LK E+G+HRLVRISP+++N +R TSF+S+
Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +    +IEI+  D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ
Sbjct: 180 EVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             N+  A  ML++KL EL+ +  +E          ++GWG QIRSYV  PY MVKD RTN
Sbjct: 240 FSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRTN 299

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
           +E ++ + V+DGD+D+F+ A L
Sbjct: 300 VETSNVNGVMDGDIDNFIIAYL 321


>gi|312199813|ref|YP_004019874.1| peptide chain release factor 2 [Frankia sp. EuI1c]
 gi|311231149|gb|ADP84004.1| peptide chain release factor 2 [Frankia sp. EuI1c]
          Length = 367

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 152/353 (43%), Positives = 223/353 (63%), Gaps = 4/353 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D +   +R + L  +  DP LW +   A+++ R+   +   IS ++ +
Sbjct: 12  LDSTLTGIETVLDVEGLRRRAADLEQEASDPDLWSDQDRAQVVTRKLSSVRGDISRVEGL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +DRL + +   EL    +D  ++ E +  L  +  ++   +  +LLSGE D  DA +++ 
Sbjct: 72  RDRLDNIMTAFEL----EDDDLISEATGQLPTLARDISTLEVRTLLSGEYDERDAIVQLS 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ DW  MLLRMY RWAE+  + TE  +  + EEAG+KSAT L+K P AYG L+
Sbjct: 128 AGAGGVDAADWTAMLLRMYLRWAERHGYSTEVYDSSEAEEAGLKSATFLVKAPYAYGTLR 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+ +RR TSF+ + + PVV+ S  ++I + D R+D +R+SG GGQ 
Sbjct: 188 SEHGVHRLVRISPFDNQNRRQTSFAGVEITPVVELSDHVDIDDKDLRVDIFRSSGPGGQG 247

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A  +L+AKL E    +           
Sbjct: 248 VNTTDSAVRITHLPTGIVVTCQNERSQLQNKAAAMVVLQAKLLERRRAEEAAEKQRLTGG 307

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             ++ +G QIR+YVL PYQMVKDLRT +E ++   VLDG++DDF+ A +  ++
Sbjct: 308 PQDVSFGSQIRNYVLHPYQMVKDLRTEVETSNTGGVLDGEIDDFIDAEVRWRR 360


>gi|23465750|ref|NP_696353.1| peptide chain release factor 2 [Bifidobacterium longum NCC2705]
 gi|189439805|ref|YP_001954886.1| peptide chain release factor 2 [Bifidobacterium longum DJO10A]
 gi|239622364|ref|ZP_04665395.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|296453666|ref|YP_003660809.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           longum JDM301]
 gi|312133211|ref|YP_004000550.1| prfb [Bifidobacterium longum subsp. longum BBMN68]
 gi|322690619|ref|YP_004220189.1| peptide chain release factor [Bifidobacterium longum subsp. longum
           JCM 1217]
 gi|23326435|gb|AAN24989.1| peptide chain release factor 2 [Bifidobacterium longum NCC2705]
 gi|189428240|gb|ACD98388.1| Protein chain release factor B [Bifidobacterium longum DJO10A]
 gi|239514361|gb|EEQ54228.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|291517272|emb|CBK70888.1| bacterial peptide chain release factor 2 (bRF-2) [Bifidobacterium
           longum subsp. longum F8]
 gi|296183097|gb|ADG99978.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           longum JDM301]
 gi|311772412|gb|ADQ01900.1| PrfB [Bifidobacterium longum subsp. longum BBMN68]
 gi|320455475|dbj|BAJ66097.1| peptide chain release factor [Bifidobacterium longum subsp. longum
           JCM 1217]
          Length = 374

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 138/353 (39%), Positives = 205/353 (58%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   +   +    D D     +  L T+   P LW +   A+ +       ++ +  +  
Sbjct: 12  EARAKYESIAKALDVDRLKADIKDLETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNS 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              R+ D   L+EL  EE D   L E    +  I+ +++  + ++LL GE D   A + +
Sbjct: 72  ASQRIDDVETLVELGHEEGDQDSLDEAQSEIGEIQKDLDQMEIQTLLDGEYDERSAVVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY R+ E+  FK + ++    EEAGIKSAT  +  P AYG L
Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+V+ +  I+I ++D R+DTY +SG GGQ
Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVRITH+PTG+VV  Q ERSQ +N+A A  +L+++L  L  ++  +       
Sbjct: 252 GVNTTYSAVRITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVLRHEEEAKKKKELAG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD++ F++A +  +
Sbjct: 312 D-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINAFIEAGIRWR 363


>gi|172039100|ref|YP_001805601.1| peptide chain release factor 2 [Cyanothece sp. ATCC 51142]
 gi|171700554|gb|ACB53535.1| peptide chain release factor 2 [Cyanothece sp. ATCC 51142]
          Length = 358

 Score =  249 bits (635), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 145/345 (42%), Positives = 214/345 (62%), Gaps = 1/345 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
              FD       +  L      P  W +   A+  ++E   L + +   +    +L D  
Sbjct: 9   RTTFDLPALKAAIKNLENTAAQPQFWDDPETAQTTLQELNDLKSQLEQYQRWCHQLEDTK 68

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            + EL   EDD ++ QE  +N+ ++   ++  + + LLSG  D+  A L ++AGAGGT++
Sbjct: 69  AIAELLELEDDTTLRQEAQENITQLNHNLDRWELQQLLSGIYDTKGAILTINAGAGGTDA 128

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRW E++ +K +  E+ +G+EAGIKSATL I+G  A+G+LKGE+G HRL
Sbjct: 129 QDWAQMLLRMYTRWGEQQGYKVDLTELSEGDEAGIKSATLEIEGRYAFGYLKGEKGTHRL 188

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSI-EIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           VRISP+++N +R TSF+ + V P +++   ++EI + D  I T R+ G GGQ+VN  ++A
Sbjct: 189 VRISPFNANGKRQTSFAGVEVMPALEEDDLKVEIPDKDLEISTSRSGGKGGQNVNKVETA 248

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+ HIPTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R +          +  WG
Sbjct: 249 VRVVHIPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQEIAEIRGDMVDAAWG 308

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            QIR+YV  PYQMVKDLRTNIE T  + V+DG LD F++A L   
Sbjct: 309 NQIRNYVFHPYQMVKDLRTNIETTDITGVMDGYLDPFIEAYLRYD 353


>gi|268679078|ref|YP_003303509.1| peptide chain release factor 2 [Sulfurospirillum deleyianum DSM
           6946]
 gi|268617109|gb|ACZ11474.1| peptide chain release factor 2 [Sulfurospirillum deleyianum DSM
           6946]
          Length = 364

 Score =  249 bits (635), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 167/354 (47%), Positives = 246/354 (69%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL+ +++ +  +   +   +RL  +    +DP  W +   A  + +E+  L++ ++   +
Sbjct: 12  KLTTKVDNIAQIIKPEEIAKRLGEIEAIEQDPEFWNDAKRAAEMQKEKTALNSLLNRYTK 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            ++ + D + L E+A  E+D + ++E  ++ QR++  +   +   +LSGE D+ +A + +
Sbjct: 72  AKNVVSDAVDLYEMANAENDETTIEELFNDAQRVEDHITNLEIAMMLSGENDTKNAIVSI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA++L RMY RWAE+  FK E L+  +GEEAGIK  + +I G NAYG+L
Sbjct: 132 HPGAGGTESQDWASILYRMYLRWAERSGFKVEVLDYQEGEEAGIKDVSFIISGENAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVRISP+D+N++RHTSFSS+ V P VDD I+I + + D ++DTYRASGAGGQ
Sbjct: 192 KVENGIHRLVRISPFDANAKRHTSFSSVMVSPEVDDDIDIVLEDRDLKVDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSA+RITH+PTG+VVQCQ +RSQHKN+A A  ML+++LYELEL+K++   +  E 
Sbjct: 252 HVNKTDSAIRITHMPTGIVVQCQNDRSQHKNRASAMKMLKSRLYELELEKQQAEKDGIE- 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            K+EIGWG QIRSYVL PYQ VKD R+NI  +  + +LDGD+   ++  L  +K
Sbjct: 311 -KSEIGWGHQIRSYVLAPYQQVKDNRSNIAYSQVNAILDGDISKVIEDVLIAQK 363


>gi|110634059|ref|YP_674267.1| peptide chain release factor 2 [Mesorhizobium sp. BNC1]
 gi|110285043|gb|ABG63102.1| bacterial peptide chain release factor 2 (bRF-2) [Chelativorans sp.
           BNC1]
          Length = 322

 Score =  249 bits (635), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 220/309 (71%), Positives = 260/309 (84%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ L+  I+ I  +   L DN+ L++L  EE D  I++E    ++ ++ E+  +Q E
Sbjct: 1   MRERQSLEENINAINGLSRSLDDNVELIKLGEEEGDAGIVEEAESAIRSLRGEISARQIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD+ND YLEVHAGAGGTESQDWA MLLRMYTRWAE+R  K E LE+HDGEEAGI
Sbjct: 61  TLLSGEADANDTYLEVHAGAGGTESQDWALMLLRMYTRWAERRGMKVETLEVHDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+ G NAYGWLK E GVHRLVRISP+DSN+RRHTSF+SIWVYPV+DDSIEIEI E
Sbjct: 121 KSATILVHGHNAYGWLKTESGVHRLVRISPFDSNARRHTSFASIWVYPVIDDSIEIEIPE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           S+ RIDTYR+SGAGGQHVNTTDSAVRITHIPTG+ V CQQERSQHKN+A+AW MLRA+LY
Sbjct: 181 SEVRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIAVACQQERSQHKNRAKAWEMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           ELEL+KREE AN  E+SK++IGWG QIRSYVLQPYQ+VKDLRT +E  SP DVLDGDLD+
Sbjct: 241 ELELKKREEAANATEASKSDIGWGHQIRSYVLQPYQLVKDLRTGVESPSPQDVLDGDLDE 300

Query: 346 FMKATLAIK 354
           FMKA+L+ +
Sbjct: 301 FMKASLSQR 309


>gi|168210100|ref|ZP_02635725.1| peptide chain release factor 2 [Clostridium perfringens B str. ATCC
           3626]
 gi|170711768|gb|EDT23950.1| peptide chain release factor 2 [Clostridium perfringens B str. ATCC
           3626]
          Length = 323

 Score =  249 bits (635), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 150/322 (46%), Positives = 216/322 (67%), Gaps = 1/322 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++   W +V +A+ + +E + + + I   K + +R+ D  +L EL  E D+ +  +   
Sbjct: 1   MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKELMEENDEETAKE-II 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +  E++  + E++LSGE D NDA L +H G GG+++ DW  MLLRMY RW EK+ 
Sbjct: 60  SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYIRWCEKKG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  E ++   G+EAG+KS TL +KG  AYG+LK E+G+HRLVRISP+++N +R TSF+S+
Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +    +IEI+  D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ
Sbjct: 180 EVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             N+  A  ML++KL EL+ +  +E          ++GWG QIRSYV  PY MVKD RTN
Sbjct: 240 FSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRTN 299

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
           +E ++ + V+DGD+D+F+ A L
Sbjct: 300 VETSNVNGVMDGDIDNFIIAYL 321


>gi|14195074|sp|P58105|RF2_CHLMU RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 369

 Score =  249 bits (635), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 160/341 (46%), Positives = 210/341 (61%), Gaps = 1/341 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           LFD +     L  L   +     W +V  A  +  +   L   +    E+++++      
Sbjct: 23  LFDPEEKETELKNLEQLSIQDSFWDDVSRAGRISEKIARLKQQLLEYNELKNKINSIKFF 82

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           LE      D  I +E        + ++   +   LL+GE D N  +L ++AGAGGTES D
Sbjct: 83  LEDEESSKDLEIQKELEKEFIFCEKKIAEWETLRLLAGELDRNSCFLSINAGAGGTESCD 142

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           W  ML RMY+RWA    +K E ++  DGE AGIK  TL + G  AYG+ K E GVHRLVR
Sbjct: 143 WVEMLFRMYSRWANSHGWKVEVIDRLDGEVAGIKHITLKLIGEYAYGYAKAESGVHRLVR 202

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+DSN++RHTSF+S+ V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAVRI
Sbjct: 203 ISPFDSNAKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRI 262

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH PTG+VV CQ ERSQ +N+    NMLRA++Y+  LQ+R E  N     K EI WG QI
Sbjct: 263 THFPTGIVVSCQSERSQIQNREACMNMLRARIYQKLLQERLEKQNTNRKEKKEISWGSQI 322

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
           R+YV QPY +VKD+RT  E  +   ++DG+ LD F+KA LA
Sbjct: 323 RNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYLA 363


>gi|291276501|ref|YP_003516273.1| peptide chain release factor 2 [Helicobacter mustelae 12198]
 gi|290963695|emb|CBG39527.1| peptide chain release factor 2 [Helicobacter mustelae 12198]
          Length = 365

 Score =  249 bits (635), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 166/352 (47%), Positives = 236/352 (67%), Gaps = 4/352 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +++ +  +   D   +RL  +    +DP+ W +   A  + +E+  ++  ++  +  
Sbjct: 13  LKTKVDSIHKIIKPDTLKERLCEIEKLQQDPNFWNDAKRAGEIGKEKSKIERMLATYQNA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ + D   L E+    +D   L+      Q ++ E++  + E +LSGE D  +A + + 
Sbjct: 73  KNSIDDARELFEI--SANDTDTLELLFAESQNLEQEIKKVEIEVMLSGEHDGANAIVTIQ 130

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDW ++L RMY RW E+R FK E L+  DGEEAGIK    L+KG NAYG++K
Sbjct: 131 PGAGGTESQDWGSILYRMYLRWCERRGFKAEILDYQDGEEAGIKGVAFLVKGENAYGYMK 190

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+D+N++RHTSF+S+ V P +DD+IEI+I E D RIDTYRASGAGGQH
Sbjct: 191 TESGVHRLVRNSPFDANTKRHTSFASVQVSPELDDNIEIDIEEKDLRIDTYRASGAGGQH 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T+SA+RITH+PTG+VVQCQ +RSQHKNKA A  ML++KLYELE +K+   +++    
Sbjct: 251 INKTESAIRITHLPTGIVVQCQNDRSQHKNKASALKMLQSKLYELEREKQN--SSVATQE 308

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 309 KSEIGWGHQIRSYVLSPYQQVKDNRSNIAYSNVEAILDGDIDSIIEGVLISK 360


>gi|257069176|ref|YP_003155431.1| peptide chain release factor 2 [Brachybacterium faecium DSM 4810]
 gi|256559994|gb|ACU85841.1| bacterial peptide chain release factor 2 (bRF-2) [Brachybacterium
           faecium DSM 4810]
          Length = 371

 Score =  249 bits (635), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 142/353 (40%), Positives = 217/353 (61%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L+ +  + D D    +++ L  +     LW +V  A+ +     H  +    I E
Sbjct: 12  QLRSTLSSIEQVTDIDALDAKIADLEKQASAQDLWDDVDNAQKVSSALSHAQSERRRISE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  R+ D  ++++LA EEDD   L+E  + L  I   ++  +  +LLSGE D  DA + +
Sbjct: 72  LDSRIEDLEVMVQLAAEEDDADTLEEAENELVSIHKTLDELEVRTLLSGEYDERDAVITI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG ++ D+A ML+RMY RWAE+  + T+ ++    EEAG+KS T  +  P AYG L
Sbjct: 132 RAGAGGVDAADFAEMLMRMYLRWAERHGYATKVMDTSHAEEAGLKSVTFEVSAPFAYGTL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI E+D ++D +R+SG GGQ
Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDSIEIPENDLKVDVFRSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+TH+PTG VV  Q E+SQ +N+A A  +++++L  L+  +          
Sbjct: 252 SVNTTDSAVRMTHLPTGTVVSMQDEKSQIQNRAAALRVMQSRLLLLKKAEEAAERKELAG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT+ ++ +PS V DG++D+F+ A +  +
Sbjct: 312 D-VKASWGDQMRSYVLNPYQMVKDLRTDYQEGNPSSVFDGEIDEFIDAGIRWR 363


>gi|15837713|ref|NP_298401.1| peptide chain release factor 2 [Xylella fastidiosa 9a5c]
 gi|9106068|gb|AAF83921.1|AE003947_1 peptide chain release factor 2 [Xylella fastidiosa 9a5c]
          Length = 338

 Score =  249 bits (635), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 170/326 (52%), Positives = 233/326 (71%), Gaps = 1/326 (0%)

Query: 28  TKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQE 87
            + E P +W     A+ L RER  LD  ++ I  + + + +    L+LA  E D  +LQ 
Sbjct: 3   RELESPTIWNTPDYAQQLGRERSLLDKTVTGIAHVLNGVAEASEFLDLAEIEQDQEMLQA 62

Query: 88  TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
             +++   +L+VE  +F+ + SG+ D  +A++++ AGAGGTE+QDWA MLLRMY RWAE 
Sbjct: 63  VLNDVDIYQLQVEKLEFQRMFSGKMDGANAFVDIQAGAGGTEAQDWAEMLLRMYLRWAEG 122

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           R +K E LE+  GE AGIKSAT  ++G  AYGWLK E GVHRLVR SP+DS++RRHTSF+
Sbjct: 123 RGWKAELLEVSGGEVAGIKSATFRVEGDFAYGWLKTETGVHRLVRKSPFDSDNRRHTSFT 182

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           S++V P VDD+I+IEI+ +D + D YR+SGAGGQHVN T+SAVRITH+P+G+VV CQ ER
Sbjct: 183 SVFVSPEVDDNIDIEINPADLKTDVYRSSGAGGQHVNKTESAVRITHVPSGIVVACQTER 242

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQH N+ +A  ML AKLYE E+QKR    ++ E+SK++IGWG QIR+YVL     +KDLR
Sbjct: 243 SQHANRDRAMKMLAAKLYESEIQKRNAEKDVLEASKSDIGWGSQIRNYVLD-QSRIKDLR 301

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAI 353
           T +E++    VLDGDLD+F++A+L  
Sbjct: 302 TGVERSDTQKVLDGDLDEFIEASLRA 327


>gi|119025481|ref|YP_909326.1| peptide chain release factor 2 [Bifidobacterium adolescentis ATCC
           15703]
 gi|154486912|ref|ZP_02028319.1| hypothetical protein BIFADO_00745 [Bifidobacterium adolescentis
           L2-32]
 gi|118765065|dbj|BAF39244.1| peptide chain release factor 2 [Bifidobacterium adolescentis ATCC
           15703]
 gi|154084775|gb|EDN83820.1| hypothetical protein BIFADO_00745 [Bifidobacterium adolescentis
           L2-32]
          Length = 376

 Score =  249 bits (635), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 140/353 (39%), Positives = 209/353 (59%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   +   +    D D        L  K  +P LW +   A+ +  +   + + +  +  
Sbjct: 12  EARAKYESISKALDVDRLTAEAKDLEVKAAEPGLWDDPENAQKVTSKLSAVQSQLKRLAS 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              R+ D   L+EL  EE+D   L E    ++ I+ +++  + ++LL GE D   A + +
Sbjct: 72  ADQRIEDVETLVELGQEEEDADTLAEAKAEVESIQKDLDDMEIQTLLDGEYDERSAVVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY RWAE+  +K + ++    EEAGIKSAT  +  P AYG L
Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+V+ +  I++ +S+ R+DTY +SG GGQ
Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVRITHIPTG+VV  Q ERSQ +N+A A  +L+++L  L  ++  +       
Sbjct: 252 GVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHEEEAKKKKELAG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD+D+F++A +  +
Sbjct: 312 D-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDEFIEAGIRWR 363


>gi|312278454|gb|ADQ63111.1| Bacterial peptide chain release factor 2 (BRF-2) [Streptococcus
           thermophilus ND03]
          Length = 326

 Score =  249 bits (635), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 148/325 (45%), Positives = 207/325 (63%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L         +++   +    L L + E+D S+ +E  
Sbjct: 1   MTEPDFWNDNIAAQKTSQELNELKIKYETFNNMKELSDETE--LYLEMLEEDDSVQEELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L+++   +   +   LLS   D N+A LE+H G+GGTE+QDWA MLLRMY R+   + 
Sbjct: 59  ETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWAEMLLRMYQRYGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TL  +GPNAYG+LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFTSV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE+EI + D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+ E  N  +  K EI WG QIRSYV  PY MVKD RT 
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTG 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
                   V+DGD++ F+ A L  +
Sbjct: 299 YGVAQVDKVIDGDIEGFIDAYLKWR 323


>gi|71276052|ref|ZP_00652333.1| Peptide chain release factor 2 [Xylella fastidiosa Dixon]
 gi|71899474|ref|ZP_00681632.1| Peptide chain release factor 2 [Xylella fastidiosa Ann-1]
 gi|170729664|ref|YP_001775097.1| peptide chain release factor 2 [Xylella fastidiosa M12]
 gi|71163135|gb|EAO12856.1| Peptide chain release factor 2 [Xylella fastidiosa Dixon]
 gi|71730787|gb|EAO32860.1| Peptide chain release factor 2 [Xylella fastidiosa Ann-1]
 gi|167964457|gb|ACA11467.1| peptide chain release factor RF-2 [Xylella fastidiosa M12]
          Length = 338

 Score =  249 bits (635), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 170/326 (52%), Positives = 233/326 (71%), Gaps = 1/326 (0%)

Query: 28  TKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQE 87
            + E P +W     A+ L RER  LD  ++ I  + + + +    L+LA  E D  +LQ 
Sbjct: 3   RELESPTIWNTPDYAQQLGRERSLLDKTVTGIAHVLNGVAEASEFLDLAEIEQDQEMLQA 62

Query: 88  TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
             +++   +L+VE  +F+ + SG+ D  +A++++ AGAGGTE+QDWA MLLRMY RWAE 
Sbjct: 63  VLNDVDIYQLQVEKLEFQRMFSGKMDGANAFVDIQAGAGGTEAQDWAEMLLRMYLRWAEG 122

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           R +K E LE+  GE AGIKSAT  ++G  AYGWLK E GVHRLVR SP+DS++RRHTSF+
Sbjct: 123 RGWKAELLEVSGGEVAGIKSATFRVEGDFAYGWLKTETGVHRLVRKSPFDSDNRRHTSFT 182

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           S++V P VDD+I+IEI+ +D + D YR+SGAGGQHVN T+SAVRITH+P+G+VV CQ ER
Sbjct: 183 SVFVSPEVDDNIDIEINPADLKTDVYRSSGAGGQHVNKTESAVRITHVPSGIVVACQTER 242

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQH N+ +A  ML AKLYE E+QKR    ++ E+SK++IGWG QIR+YVL     +KDLR
Sbjct: 243 SQHANRDRAMKMLAAKLYESEIQKRNAEKDVLEASKSDIGWGSQIRNYVLD-QSRIKDLR 301

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAI 353
           T +E++    VLDGDLD+F++A+L  
Sbjct: 302 TGVERSDTQKVLDGDLDEFIEASLKA 327


>gi|18311152|ref|NP_563086.1| peptide chain release factor 2 [Clostridium perfringens str. 13]
 gi|18145835|dbj|BAB81876.1| peptide chain release factor 2 [Clostridium perfringens str. 13]
          Length = 323

 Score =  249 bits (635), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 150/322 (46%), Positives = 217/322 (67%), Gaps = 1/322 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++   W +V +A+ + +E + + + I   + + +R+ D  +L EL  E D+ +  +   
Sbjct: 1   MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFRNLNERIDDVEVLKELMEENDEETAKE-II 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +  E++  + E++LSGE D NDA L +H G GG+++ DW  MLLRMYTRW EK+ 
Sbjct: 60  SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  E ++   G+EAG+KS TL +KG  AYG+LK E+G+HRLVRISP+++N +R TSF+S+
Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +    +IEI+  D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ
Sbjct: 180 EVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             N+  A  ML++KL EL+ +  +E          ++GWG QIRSYV  PY MVKD RTN
Sbjct: 240 FSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRTN 299

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
           +E ++ + V+DGD+D+F+ A L
Sbjct: 300 VETSNVNGVMDGDIDNFIIAYL 321


>gi|84494447|ref|ZP_00993566.1| peptide chain release factor 2 [Janibacter sp. HTCC2649]
 gi|84383940|gb|EAP99820.1| peptide chain release factor 2 [Janibacter sp. HTCC2649]
          Length = 370

 Score =  249 bits (635), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 139/352 (39%), Positives = 206/352 (58%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   +  +  + D       ++ L  +   P LW +  +A+ +             +  +
Sbjct: 12  LRTTMTSVRDVTDLTALEATIADLEEQVAAPDLWDDQEKAQAVTSLLSRAKAEYDRVTGM 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             ++ D   L+E+  EE+D   L E    L+ +K  V   +  +LLSGE D   A + + 
Sbjct: 72  DTKVDDLEALVEMGQEENDAETLLEAEKELKIVKKAVGELEVRTLLSGEWDERSAVVTIR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A ML+RMY RWAE+  + T+ ++    EEAGIKSAT  +  P A+G L 
Sbjct: 132 AGAGGVDAADFAEMLMRMYLRWAERHGYPTKVMDTSYAEEAGIKSATFEVNVPYAFGNLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF ++ V P+++ +  IEI E+D +ID +R+SG GGQ 
Sbjct: 192 VEGGTHRLVRISPFDNQGRRQTSFVAVEVIPLIEGTDSIEIPENDLKIDVFRSSGPGGQS 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG VV  Q E+SQ +N+A A  +++++L  L+  +   +       
Sbjct: 252 VNTTDSAVRMTHIPTGTVVSMQNEKSQIQNRAAALRVMQSRLLLLKRAEEAAVKKEMAGD 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  WG Q+RSYVL PYQMVKDLRT  E  +P+ V DGD+D F++A +  +
Sbjct: 312 -VKASWGDQMRSYVLNPYQMVKDLRTEFETGNPTAVFDGDIDGFIEAGIRWQ 362


>gi|322688633|ref|YP_004208367.1| peptide chain release factor [Bifidobacterium longum subsp.
           infantis 157F]
 gi|320459969|dbj|BAJ70589.1| peptide chain release factor [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 374

 Score =  249 bits (635), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 138/353 (39%), Positives = 205/353 (58%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   +   +    D D     +  L T+   P LW +   A+ +       ++ +  +  
Sbjct: 12  EARAKYESIAKALDVDRLKADIKDLETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNS 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              R+ D   L+EL  EE D   L E    +  I+ +++  + ++LL GE D   A + +
Sbjct: 72  ASQRIDDVETLVELGREEGDQDSLDEAQSEIGEIQKDLDQMEIQTLLDGEYDERSAVVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY R+ E+  FK + ++    EEAGIKSAT  +  P AYG L
Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+V+ +  I+I ++D R+DTY +SG GGQ
Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVRITH+PTG+VV  Q ERSQ +N+A A  +L+++L  L  ++  +       
Sbjct: 252 GVNTTYSAVRITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVLRHEEEAKKKKELAG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD++ F++A +  +
Sbjct: 312 D-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINAFIEAGIRWR 363


>gi|163852399|ref|YP_001640442.1| peptide chain release factor 2 [Methylobacterium extorquens PA1]
 gi|218531158|ref|YP_002421974.1| peptide chain release factor 2 [Methylobacterium chloromethanicum
           CM4]
 gi|240139734|ref|YP_002964211.1| peptide chain release factor RF-2 [Methylobacterium extorquens AM1]
 gi|254562146|ref|YP_003069241.1| peptide chain release factor RF-2 [Methylobacterium extorquens DM4]
 gi|163664004|gb|ABY31371.1| peptide chain release factor 2 [Methylobacterium extorquens PA1]
 gi|218523461|gb|ACK84046.1| peptide chain release factor 2 [Methylobacterium chloromethanicum
           CM4]
 gi|240009708|gb|ACS40934.1| peptide chain release factor RF-2 [Methylobacterium extorquens AM1]
 gi|254269424|emb|CAX25390.1| peptide chain release factor RF-2 [Methylobacterium extorquens DM4]
          Length = 321

 Score =  249 bits (635), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 220/309 (71%), Positives = 253/309 (81%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD A++ IK+++  L D   L+EL   E D + + E    ++ ++ E   +Q E
Sbjct: 1   MRERQELDEAVTAIKKLERDLEDGATLIELGEMEGDQASISEGEATIKAVEKEAASRQVE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWANML RMY RWAE+RKFK E +E+ DGEEAGI
Sbjct: 61  TLLSGEADGFDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKFKVEIVEMTDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K ATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSF+S+WVYPVVDD IEIEI E
Sbjct: 121 KGATLLIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVVDDRIEIEIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYR+SGAGGQHVNTTDSAVRITH PTG+VV CQQERSQHKN+A AWNMLRA+LY
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHNPTGIVVACQQERSQHKNRATAWNMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE AN   +SKT+IGWG QIRSYVLQPYQ+VKDLRT  + T P +VLDGDLD 
Sbjct: 241 EAELKKREEKANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGTQSTDPDEVLDGDLDP 300

Query: 346 FMKATLAIK 354
           FM+A+LA +
Sbjct: 301 FMEASLAQR 309


>gi|225350864|ref|ZP_03741887.1| hypothetical protein BIFPSEUDO_02438 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158320|gb|EEG71562.1| hypothetical protein BIFPSEUDO_02438 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 376

 Score =  248 bits (634), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 139/353 (39%), Positives = 208/353 (58%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   +   +    D D    +   L  +  +P LW N   A+ +  +   + + +  +  
Sbjct: 12  EARAKYESISKALDVDRLTAQAKDLEVQAAEPGLWDNPENAQKVTSKLSAVQSQLKRLAS 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              R+ D   L+EL  EE+D   L E    ++ I+ ++   + ++LL GE D   A + +
Sbjct: 72  ASQRIDDVETLVELGQEEEDADTLAEAQSEVESIQNDLADMEIQTLLDGEYDERSAVVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY RWAE+  +K + ++    EEAGIKSAT  +  P AYG +
Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRM 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+V+ +  I++ +S+ R+DTY +SG GGQ
Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVRITHIPTG+VV  Q ERSQ +N+A A  +L+++L  L  ++  +       
Sbjct: 252 GVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHEEEAKKKKELAG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD+D F++A +  +
Sbjct: 312 D-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAGIRWR 363


>gi|58336996|ref|YP_193581.1| peptide chain release factor 2 [Lactobacillus acidophilus NCFM]
 gi|227903556|ref|ZP_04021361.1| peptide chain release factor RF2 [Lactobacillus acidophilus ATCC
           4796]
 gi|58254313|gb|AAV42550.1| peptide chain release factor 2 [Lactobacillus acidophilus NCFM]
 gi|227868443|gb|EEJ75864.1| peptide chain release factor RF2 [Lactobacillus acidophilus ATCC
           4796]
          Length = 332

 Score =  248 bits (634), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 152/324 (46%), Positives = 200/324 (61%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W N  +A+ L+ E   L        ++ +   + L  L+L  EE D  +  E  
Sbjct: 1   MAQPDFWDNQEKAQKLISENNVLKEKRDSFLKLSEDYENELTALDLLREEPDSDLQTEVE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L  ++      + + LLSG+ DS++A  E+H GAGGTE+ DW  MLLRMY R+ +   
Sbjct: 61  TDLIALQEAFHNYELDLLLSGKYDSHNALFEIHPGAGGTEAMDWGQMLLRMYQRYCDTAG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E  +   GEEAG+KS T  + G NAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 FKFEINDYEPGEEAGVKSVTARVVGHNAYGMLKSENGVHRLVRISPFDSAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDSI+I+I   D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ
Sbjct: 181 EVIPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A N LRAKL+ LE +K+ +     +  + EIGWG QIRSYV  PY +VKDLRT 
Sbjct: 241 IQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E    + V+DG L  F+ + L  
Sbjct: 301 YETADTTGVMDGKLQPFIYSYLQW 324


>gi|313207347|ref|YP_004046524.1| bacterial peptide chain release factor 2 (brf-2) [Riemerella
           anatipestifer DSM 15868]
 gi|312446663|gb|ADQ83018.1| bacterial peptide chain release factor 2 (bRF-2) [Riemerella
           anatipestifer DSM 15868]
 gi|315023242|gb|EFT36252.1| peptide chain release factor 2 [Riemerella anatipestifer RA-YM]
 gi|325335194|gb|ADZ11468.1| Protein chain release factor B [Riemerella anatipestifer RA-GD]
          Length = 376

 Score =  248 bits (634), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 150/352 (42%), Positives = 232/352 (65%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S++++ L      D     ++  + KT  P  W N  EA++ +++ +     +   +EI
Sbjct: 16  ISQRVSDLHKYLQIDKKKLEITNDDEKTAAPEFWDNPKEAEVFLKQLRSKKKWVEDYEEI 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D  +L+E A   +D    QE       +  +VE  +F+++LS E D   A L++ 
Sbjct: 76  HTGLEDLQVLIEFAK--EDPDSAQELETAYPTLLEKVENLEFKNMLSNEGDELSAVLQIT 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA+ML+RMY  WA+K  +K + L   +G+ AG+K+ TL I+G  A+G+LK
Sbjct: 134 AGAGGTESCDWASMLMRMYLMWADKNGYKVKELNFQEGDVAGVKTVTLEIEGEYAFGYLK 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDSIEI I+ +D   +T RASGAGGQ+
Sbjct: 194 GENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEININPADISFETMRASGAGGQN 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++AVR+ H PTG++++  + RSQ +NK +A  +L+++LYE+EL++R    N  E++
Sbjct: 254 VNKVETAVRLRHAPTGIIIENSESRSQLQNKEKALQLLKSRLYEIELEERMRARNEIEAN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K +I WG QIR+YV+ PY++VKD+R+  E +    V++G++  F+KA L   
Sbjct: 314 KMKIEWGSQIRNYVMHPYKLVKDVRSGHETSDVDAVMNGEITPFLKAYLMAD 365


>gi|182624026|ref|ZP_02951814.1| peptide chain release factor 2 [Clostridium perfringens D str.
           JGS1721]
 gi|177910919|gb|EDT73273.1| peptide chain release factor 2 [Clostridium perfringens D str.
           JGS1721]
          Length = 323

 Score =  248 bits (634), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 151/322 (46%), Positives = 217/322 (67%), Gaps = 1/322 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++   W +V +A+ + +E + + + I   K + +R+ D  +L EL  E D+ +  +   
Sbjct: 1   MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKELMEENDEETAKE-II 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +  E++  + E++LSGE D NDA L +H G GG+++ DW  MLLRMYTRW EK++
Sbjct: 60  SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKE 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  E ++   G+EAG+KS TL +KG  AYG+LK E+G+HRLVRISP+++N +R TSF+S+
Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +    +IEI+  D RIDTYRA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ
Sbjct: 180 EVLPELTSDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             N+  A  ML++KL EL+ +  +E          ++GWG QIRSYV  PY MVKD RTN
Sbjct: 240 FSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRTN 299

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E ++ + V+DGD+D+F+ A L
Sbjct: 300 FETSNVNGVMDGDIDNFIIAYL 321


>gi|58584553|ref|YP_198126.1| protein chain release factor B [Wolbachia endosymbiont strain TRS
           of Brugia malayi]
 gi|58418869|gb|AAW70884.1| Protein chain release factor B [Wolbachia endosymbiont strain TRS
           of Brugia malayi]
          Length = 336

 Score =  248 bits (634), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 162/327 (49%), Positives = 230/327 (70%), Gaps = 1/327 (0%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL  L ++T D +LWQ+  +A+ +++E   + N +    +++    D + L++ A++E+D
Sbjct: 2   RLEKLESQTADGNLWQDNQKAQEVLKEYSKIKNDVESFSKLESDYNDAISLMKSAIDEND 61

Query: 82  CSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
                E  + L +++  ++ K+ + L + EAD+ND +LE+H+GAGGTES DWA ML+RMY
Sbjct: 62  EEFFSEVENELVKLEKLIKRKETDFLFTDEADNNDCFLEIHSGAGGTESNDWAEMLMRMY 121

Query: 142 TRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
            RWAE    FK E +E  +G+  GIKSA + I G  AYGW K E G+HRLVRISP+D+NS
Sbjct: 122 IRWAEIYHNFKVEVVEKLEGDSIGIKSAIIKIIGEKAYGWAKSESGIHRLVRISPFDANS 181

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           +RHTSF SI V PV++DSI+I + E   +IDTYRASGAGGQHVN T+SAVR+THIPTGV+
Sbjct: 182 KRHTSFVSIGVTPVIEDSIDIAVDEGTLKIDTYRASGAGGQHVNKTESAVRVTHIPTGVI 241

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           VQCQ  RSQH+NK +A  +L+ +LY+++L+K+E+        K  IGWG QIRSYV+ PY
Sbjct: 242 VQCQNNRSQHQNKNEALKLLKGRLYQIKLEKKEQKMAEEYGKKCGIGWGNQIRSYVMHPY 301

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           QMVKDLRT  E  + + + DG++D F+
Sbjct: 302 QMVKDLRTGYEVGNINSIFDGNIDCFI 328


>gi|228472944|ref|ZP_04057701.1| peptide chain release factor 2, programmed [Capnocytophaga
           gingivalis ATCC 33624]
 gi|228275526|gb|EEK14303.1| peptide chain release factor 2, programmed [Capnocytophaga
           gingivalis ATCC 33624]
          Length = 366

 Score =  248 bits (634), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 146/352 (41%), Positives = 235/352 (66%), Gaps = 2/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS+++  L      D     ++    KT  P  W +  +A++L+++ Q     ++  ++
Sbjct: 9   ELSQRVENLEKYLQIDKKKIEIANEEEKTLAPDFWDSPKQAQLLVQKLQSQKKWVTDYEK 68

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
             + + +  I+L+     ++    +E  D   +  L +E  +F ++LS E D+  A L++
Sbjct: 69  SAEMVEELQIMLDFYK--ENAISAEEVEDFYGQTLLHIENLEFRNMLSDEGDALSAVLQI 126

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGTES DWA+ML+RMY  WA ++ F  + L   +G+ AG+K+ TL I G  A+G+L
Sbjct: 127 TAGAGGTESCDWASMLMRMYMMWANRQGFSVKELNFQEGDVAGVKTVTLEIDGEFAFGYL 186

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE GVHRLVRISP+DSN++RHTSF+S++VYP+ DD+IEIEI+ +D   +T R+SGAGGQ
Sbjct: 187 KGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDTIEIEINPADISFETMRSSGAGGQ 246

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++AVR+ H PTG++++  + RSQ  NK +A  +L+++LYE+EL+KR+   +  E+
Sbjct: 247 NVNKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQLLKSQLYEIELKKRQAKRDEIEA 306

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K +I WG QIR+YV+ PY++VKD+R+  E T+   V++G+LDDF+KA L +
Sbjct: 307 NKMKIEWGSQIRNYVMHPYKLVKDVRSGYETTNVDAVMNGELDDFLKAYLML 358


>gi|317124427|ref|YP_004098539.1| bacterial peptide chain release factor 2 (bRF-2) [Intrasporangium
           calvum DSM 43043]
 gi|315588515|gb|ADU47812.1| bacterial peptide chain release factor 2 (bRF-2) [Intrasporangium
           calvum DSM 43043]
          Length = 370

 Score =  248 bits (634), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 141/352 (40%), Positives = 219/352 (62%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   ++ + G+ D D   +++  L  +  +P+LW +  +A+ +       +     +  +
Sbjct: 12  LRATMDSVRGVTDLDVLAKQIVELERQASEPNLWDDQDKAQQVTSALSRANAERDRVLSM 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             R+ D   L+E+A EE D   + E   +L +IK ++   +  +LLSGE D  +A + + 
Sbjct: 72  DSRINDLETLVEMATEESDQDTMDEALRDLAKIKKDLGELEVRTLLSGEYDEREAVVTIR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A ML+RMY RWAE+  + T+ ++    EEAG+KSAT  +  P A+G L 
Sbjct: 132 AGAGGVDAADFAEMLMRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVNVPYAFGHLN 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++    IEI E++ +ID +R+SG GGQ 
Sbjct: 192 VEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESDDSIEIPENELKIDVFRSSGPGGQS 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV  Q E+SQ +N+A A  +L+++L  L+ +  E       + 
Sbjct: 252 VNTTDSAVRMTHLPTGIVVSMQNEKSQIQNRAAALRVLQSRL-LLQRKAEEAAVKKEMAG 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  WG Q+RSYVL PYQMVKDLRT+ E  +P+ V DGD+D F++A +  +
Sbjct: 311 DVKASWGDQMRSYVLNPYQMVKDLRTDFETGNPAAVFDGDIDGFIEAGIRWQ 362


>gi|167755601|ref|ZP_02427728.1| hypothetical protein CLORAM_01115 [Clostridium ramosum DSM 1402]
 gi|237734350|ref|ZP_04564831.1| peptide chain release factor 2 [Mollicutes bacterium D7]
 gi|167704540|gb|EDS19119.1| hypothetical protein CLORAM_01115 [Clostridium ramosum DSM 1402]
 gi|229382580|gb|EEO32671.1| peptide chain release factor 2 [Coprobacillus sp. D7]
          Length = 365

 Score =  248 bits (634), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 157/346 (45%), Positives = 209/346 (60%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +       D +   + +  L   T     W +  +AK+   +   +         ++  L
Sbjct: 17  MTEFYQSIDIEAYRREIEGLTVITLQEGFWDDANKAKVTYDKLNKMKKTTDQYDLLETTL 76

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
                  EL    +D    +    +    + E+   +   LLSGE D  +A +E+H GAG
Sbjct: 77  TSLDETYELVKNTEDQEFKEILESDYTVFEKELSKFETMMLLSGEHDDLNAIVEIHPGAG 136

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTESQDWA ML RMY R+A  + +K E L+  DG+ AGIKS T+LIKG N YG LK E+G
Sbjct: 137 GTESQDWAEMLFRMYQRYAANKGWKVEVLDYLDGDVAGIKSVTMLIKGDNVYGHLKAEKG 196

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR+SP+DS  RRHTSF+S+ V P  ++ IEIEI  +D +IDTYRASGAGGQH+N T
Sbjct: 197 VHRLVRLSPFDSAKRRHTSFASVDVMPEFNNEIEIEIQSTDLKIDTYRASGAGGQHINKT 256

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PT +VV CQ +RSQ +N+ QA  ML++KLY+L L+K+       +  + EI
Sbjct: 257 DSAVRITHLPTNIVVTCQSQRSQIQNREQAMVMLKSKLYQLMLEKQASELKELKGEQKEI 316

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            WG QIRSYVL PY +VKD R+  E  +P  VLDGDLD F+ A L 
Sbjct: 317 AWGSQIRSYVLHPYSLVKDNRSGYESNNPKAVLDGDLDGFIYAYLK 362


>gi|227497420|ref|ZP_03927652.1| peptide chain release factor RF2 [Actinomyces urogenitalis DSM
           15434]
 gi|226833096|gb|EEH65479.1| peptide chain release factor RF2 [Actinomyces urogenitalis DSM
           15434]
          Length = 374

 Score =  248 bits (634), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 142/357 (39%), Positives = 214/357 (59%), Gaps = 4/357 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L      +  + D      R++ L+ +   P LW +   A+++     H    +  +++
Sbjct: 11  RLRHTHASIEAVTDPQALRARIAELSEQAAAPDLWDDPDAAQVVTSNLSHAQADLKRVED 70

Query: 62  IQDRLCDNLILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           +  R+ D   ++E+      +D   +L E   +L  I  ++   +  +LLSGE D  DA 
Sbjct: 71  LGSRIDDLEAMVEMAGEEEGDDAAELLAEAESDLASISKDLSELEIRTLLSGEYDQRDAV 130

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ D+A MLLRMY RWAE+  + T+ L+    EEAG+KS T  +  P AY
Sbjct: 131 VTIRSGAGGVDAADFAEMLLRMYLRWAERHGYATKVLDTSYAEEAGLKSVTFEVHAPYAY 190

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  IE+ E+D RID +R+SG 
Sbjct: 191 GTLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHIEVPETDIRIDVFRSSGP 250

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +N+A A  +L+++L  L+ Q+ +     
Sbjct: 251 GGQSVNTTDSAVRITHLPTGLVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQQEEDAKKKE 310

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                 +  WG Q+RSYVL PYQMVKDLRT+ E  +P  V DGD+D F+ A +  +K
Sbjct: 311 LAGD-VKASWGDQMRSYVLNPYQMVKDLRTSYEVGNPDSVFDGDIDGFIDAGIRWRK 366


>gi|163795148|ref|ZP_02189116.1| Protein chain release factor B [alpha proteobacterium BAL199]
 gi|159179546|gb|EDP64075.1| Protein chain release factor B [alpha proteobacterium BAL199]
          Length = 322

 Score =  248 bits (634), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 195/309 (63%), Positives = 246/309 (79%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L+  +  + ++   L D L+L+EL   E D + + +    L+ I+++ E  Q E
Sbjct: 1   MQERTRLEKQLGEVNQLNQGLEDALMLIELGETEGDDATVADAEKELEAIRVKAESMQIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD+ND YLEVHAGAGGTE+QDWA MLLRMYTRW+E+R FK E LE   GEEAG+
Sbjct: 61  SLLSGEADANDCYLEVHAGAGGTEAQDWAEMLLRMYTRWSERRGFKVEWLEESQGEEAGL 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISPYDS +RRHTSFSS WVYPV+DDSI+I + +
Sbjct: 121 KSATVKISGHNAYGWLKIESGVHRLVRISPYDSQARRHTSFSSAWVYPVIDDSIDIVVED 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D ++DTYRASGAGGQHVN TDSA+RITH+P+G+VVQCQ +RSQH+N+A A  ML+A+LY
Sbjct: 181 KDLKVDTYRASGAGGQHVNRTDSAIRITHLPSGIVVQCQADRSQHRNRATAMEMLKARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL++REE A+  E++K++IGWG QIRSYVLQPYQMVKDLRTN E ++P+ VLDGD+D 
Sbjct: 241 EAELKRREEEASATEATKSDIGWGHQIRSYVLQPYQMVKDLRTNEESSNPAAVLDGDIDA 300

Query: 346 FMKATLAIK 354
           F++A LA +
Sbjct: 301 FLEAALAAR 309


>gi|220927713|ref|YP_002504622.1| peptide chain release factor 1 [Clostridium cellulolyticum H10]
 gi|254790874|sp|B8I562|RF1_CLOCE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219998041|gb|ACL74642.1| peptide chain release factor 1 [Clostridium cellulolyticum H10]
          Length = 359

 Score =  248 bits (634), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 124/351 (35%), Positives = 186/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD    A  R   ++ K  DP +  N  E K  M+E   L+  +   +E      +   
Sbjct: 1   MFDKLQAAEDRYEEISHKLSDPDVINNQDEYKKYMKECSDLEEIVQKYREYTKVTKEIEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKL----EVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             EL  +  D    +      Q  +          +   +     D  +  +E+  GAGG
Sbjct: 61  ARELLEQTLDKDFREMVQQEFQEAQEKLEVIKRQLKILIVPKDPNDDKNVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A +L R   ++AEK+++K E L+ +  E  G K     I+G  AY  LK E GV
Sbjct: 121 EEAALFAGVLFRAMAKYAEKKRWKYEILDSNPTELGGFKEVVFTIEGKGAYSRLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS  ++ V P   + ++++I+ SD RIDTYRASGAGGQH+N TD
Sbjct: 181 HRVQRVPSTESSGRIHTSTITVAVLP-EVEEVDVDINPSDLRIDTYRASGAGGQHINKTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SA+RITH+PTG+VV CQ ERSQHKNK +A  +LR+KLYE+  +++  I  + +  K ++G
Sbjct: 240 SAIRITHMPTGIVVSCQDERSQHKNKDKAMKILRSKLYEIAQEQQ--INEVAQDRKNQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R N+       VLDGDLD+ + A +   +
Sbjct: 298 TGDRSERIRTYNY-PQGRVTDHRINLTLYKLEQVLDGDLDELIDALITTDQ 347


>gi|213692886|ref|YP_002323472.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|213524347|gb|ACJ53094.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|320459060|dbj|BAJ69681.1| peptide chain release factor [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 374

 Score =  248 bits (634), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 137/353 (38%), Positives = 205/353 (58%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   +   +    D +     +  L T+   P LW +   A+ +       ++ +  +  
Sbjct: 12  EARAKYESIAKALDINRLKADIKDLETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNS 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              R+ D   L+EL  EE D   L E    +  I+ +++  + ++LL GE D   A + +
Sbjct: 72  ASQRIDDVETLVELGHEEGDQDSLDEAQSEIGEIQKDLDQMEIQTLLDGEYDERSAVVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY R+ E+  FK + ++    EEAGIKSAT  +  P AYG L
Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+V+ +  I+I ++D R+DTY +SG GGQ
Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVRITH+PTG+VV  Q ERSQ +N+A A  +L+++L  L  ++  +       
Sbjct: 252 GVNTTYSAVRITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVLRHEEEAKKKKELAG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD++ F++A +  +
Sbjct: 312 D-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINAFIEAGIRWR 363


>gi|7404432|sp|O51101|RF2_BORBU RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 359

 Score =  248 bits (634), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 149/344 (43%), Positives = 215/344 (62%), Gaps = 4/344 (1%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             LFD +    ++     +    + W +   A+ +++ +  L N I   +E+ +++ D  
Sbjct: 17  RKLFDKNEIQAKIEKYEKEINQKNFWNDPKRAQKVIKAQSILKNKIDPWEELINKIKDLS 76

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L       ++             ++ + +     S    E D+N+A+L +H+GAGGTE+
Sbjct: 77  DL---CEIAENEKDTNGLEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGGTEA 133

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+HRL
Sbjct: 134 CDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRL 192

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           +RISP+D+  +RHTSF+S++V PV+DD IEI I   D RIDTYRASGAGGQHVN T SAV
Sbjct: 193 IRISPFDAAKKRHTSFASVFVDPVIDDKIEITIKPEDIRIDTYRASGAGGQHVNKTSSAV 252

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     + +K EI WG 
Sbjct: 253 RITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGN 312

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L  K
Sbjct: 313 QIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 356


>gi|315187113|gb|EFU20870.1| bacterial peptide chain release factor 2 (bRF-2) [Spirochaeta
           thermophila DSM 6578]
          Length = 364

 Score =  248 bits (634), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 168/355 (47%), Positives = 233/355 (65%), Gaps = 4/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           + R+    GG+F+  +  +++S L  +T  P LW +   A+ ++   + L         +
Sbjct: 1   MRRKSKKPGGIFENSSIKEQISRLEEETGRPDLWNDRKHAEEVLSRLRRLKVRYEGWASL 60

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQR---IKLEVEYKQFESLLSGEADSNDAYL 119
              + D   L +LA EE+D S  +E  +  Q+    + +    +   LL+ E D  DAYL
Sbjct: 61  VQEVEDIHTLYDLAAEENDPSQEEEEEELRQQLAEAERKFRELRLRELLNEEYDQKDAYL 120

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            +HAGAGG E+ DWA+MLLRMY RW E++ F T+ +++ + +E GIKS T+ +KG  A+G
Sbjct: 121 TIHAGAGGMEACDWASMLLRMYLRWLERKGFSTQIVDMVE-DEGGIKSVTVEVKGDYAFG 179

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           +LKGE GVHRLVRISP+D++ RRHTSF+S++V P+++D IE++I   D RIDTYR+ GAG
Sbjct: 180 YLKGEAGVHRLVRISPFDASGRRHTSFASVYVSPIIEDDIEVDIRPEDLRIDTYRSQGAG 239

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQHVN T+SAVRITH+PTG+VVQCQ ERSQHKN+  A  MLR++LYE   Q REE     
Sbjct: 240 GQHVNKTESAVRITHLPTGIVVQCQNERSQHKNREIAMRMLRSRLYEYYQQLREEEQEKK 299

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              K +I WG QIRSYV QPY MVKDLRT +E  +   V+DGDLD F++A L  +
Sbjct: 300 AIEKKDISWGNQIRSYVFQPYTMVKDLRTRVETGNIQAVMDGDLDMFIEAYLLQQ 354


>gi|12323033|gb|AAG51510.1|AC058785_13 peptide chain release factor 2, putative [Arabidopsis thaliana]
          Length = 426

 Score =  248 bits (634), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 158/351 (45%), Positives = 222/351 (63%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +++ +  +     W   + RL  L+ +     LW +   A  + RE   L   +  +   
Sbjct: 66  IAQSIQVIKRRLQWKKLLVRLKVLSAELNKSDLWDDPTHAGKISREHGSLTGKMKGVMTF 125

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L +++ +L+LA EE+D  +  ET   L  ++   + K+ E+LLS + D    Y+EV 
Sbjct: 126 ERELLEHIDMLKLAKEENDSELESETLKALIDMRRVSKEKELEALLSADNDPCSCYIEVQ 185

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA M++ MY  WA++RKF    ++   GE AGIK AT+ + G  AYG+ K
Sbjct: 186 AGAGGTESNDWAAMVMEMYKTWAQRRKFSVTVVDEAPGEIAGIKRATIKVNGEYAYGYAK 245

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+DS  RRHTSF+++ V P+  D S  +EI++SD RI+ +R+ GAGGQ
Sbjct: 246 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGSTRVEINDSDLRIERFRSGGAGGQ 305

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H NTTDSAVRI HIPTG+   CQ ERSQH NKA A  +L+++L +LE+ ++  +      
Sbjct: 306 HANTTDSAVRIVHIPTGITATCQNERSQHSNKASAMAVLQSRLDQLEMARQTAMNAQHTQ 365

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           S TEI WG QIR+YVL PY+MVKDLRTN E + P  VL+GDLD F+ + L+
Sbjct: 366 SLTEISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSFLS 416


>gi|227877191|ref|ZP_03995265.1| peptide chain release factor RF2 [Lactobacillus crispatus JV-V01]
 gi|256848945|ref|ZP_05554379.1| peptide chain release factor 2 [Lactobacillus crispatus MV-1A-US]
 gi|262045712|ref|ZP_06018676.1| peptide chain release factor 2 [Lactobacillus crispatus MV-3A-US]
 gi|293380190|ref|ZP_06626272.1| peptide chain release factor 2 [Lactobacillus crispatus 214-1]
 gi|295692545|ref|YP_003601155.1| peptide chain release factor 2 [Lactobacillus crispatus ST1]
 gi|227863245|gb|EEJ70690.1| peptide chain release factor RF2 [Lactobacillus crispatus JV-V01]
 gi|256714484|gb|EEU29471.1| peptide chain release factor 2 [Lactobacillus crispatus MV-1A-US]
 gi|260573671|gb|EEX30227.1| peptide chain release factor 2 [Lactobacillus crispatus MV-3A-US]
 gi|290923234|gb|EFE00155.1| peptide chain release factor 2 [Lactobacillus crispatus 214-1]
 gi|295030651|emb|CBL50130.1| Peptide chain release factor 2 [Lactobacillus crispatus ST1]
          Length = 332

 Score =  248 bits (633), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 152/324 (46%), Positives = 201/324 (62%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W N  +A+ L+ E   L        ++Q    D    +EL  EE D  + +E  
Sbjct: 1   MAQPDFWNNQEKAQKLISETNRLKEKRDSFLKLQTSYEDETTAVELLREEPDPDLQKEVE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L  ++ +    + + LLSG+ DS++A +E+H GAGGTE+ DW  MLLRMY R+ +   
Sbjct: 61  ADLATLQEDFHNYELDLLLSGKYDSHNALMEIHPGAGGTEAMDWGQMLLRMYQRYCDTAG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E  +   GEEAG+KS +  I G NAYG LK E GVHRLVRISP+D+  RRHTSF+S+
Sbjct: 121 FKFEINDYEPGEEAGLKSVSARIVGKNAYGMLKSENGVHRLVRISPFDAAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P VDDSI+I+I   D R+D YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ
Sbjct: 181 EVIPEVDDSIQIDIDPKDLRVDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A N LRAKL+ LE +K+ +     +  + EIGWG QIRSYV  PY +VKDLRT 
Sbjct: 241 LQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E      V+DG L  F+ + L  
Sbjct: 301 HETADAQGVMDGKLQPFIYSYLQW 324


>gi|261855644|ref|YP_003262927.1| peptide chain release factor 1 [Halothiobacillus neapolitanus c2]
 gi|261836113|gb|ACX95880.1| peptide chain release factor 1 [Halothiobacillus neapolitanus c2]
          Length = 364

 Score =  248 bits (633), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 119/339 (35%), Positives = 169/339 (49%), Gaps = 9/339 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              +R   LN    DP +  N    + L +E   L + +  +   Q    D      ++ 
Sbjct: 12  ALSERYDELNALLSDPEVINNQDRFRSLSKEHARLHDLVVVLDRYQKAKADLQAAEHMSK 71

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESL---LSGEADSNDAYLEVHAGAGGTESQDWA 134
           E D         +  +         +   +       AD  D  LE+ AG GG E+  +A
Sbjct: 72  EPDREMAALALEEMKELQTEIESLDEALKVHLLPHDPADDGDVILEIRAGTGGDEAAIFA 131

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY ++A+ + ++TE L    GE  G +     I G   Y  LK E G HR+ R+ 
Sbjct: 132 GDLLRMYLKYADTQGWRTEILSEQPGEHGGYREVIAQISGDGVYAALKFESGAHRVQRVP 191

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V PVV +S  I +  S  RIDT+RASGAGGQH+N TDSA+R+TH
Sbjct: 192 TTETQGRVHTSAATVAVMPVVPESEAITLDPSTLRIDTFRASGAGGQHINKTDSAIRVTH 251

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A+L + E QK    A    + K  +G G    +
Sbjct: 252 LPTGMVVECQDERSQHKNKARALSVLAARLADAERQK--AHAEQAATRKALVGSGDRSER 309

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   V D R N+       VL GDLD  +   
Sbjct: 310 IRTYNF-PQGRVTDHRINLTLYQLDRVLLGDLDPIIHPL 347


>gi|302334951|ref|YP_003800158.1| bacterial peptide chain release factor 2 (bRF-2) [Olsenella uli DSM
           7084]
 gi|301318791|gb|ADK67278.1| bacterial peptide chain release factor 2 (bRF-2) [Olsenella uli DSM
           7084]
          Length = 370

 Score =  248 bits (633), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 155/352 (44%), Positives = 206/352 (58%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+R+L+ +      D   + ++ L  ++  P  W +   A   M E       +  I++ 
Sbjct: 11  LARRLDEVESYLHIDERRRVVAELEERSARPGFWDDADAASRSMTELTRAKEDVQGIEDA 70

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D    LEL LE  D  +L E +     ++ E+   +  S  + + D  DA + V 
Sbjct: 71  RTRLGDASAALELGLETGDGDLLDEAARICGALEDELGELELSSWFADDLDHGDAIVTVT 130

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            G GG E+QDW +ML +MY R+ ++R +K    +    E  GI  AT  + G NAYG L+
Sbjct: 131 PGQGGLEAQDWCDMLFKMYLRYCDRRGWKVTVNDAPAAEAIGIDRATFTVSGKNAYGMLR 190

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQGVHRLVRISP D   RR T+F+ + V PV+ D +E++I   D RID Y ASG GGQ 
Sbjct: 191 AEQGVHRLVRISPTDDKKRRQTTFAGVEVLPVLPDDVEVDIDPGDLRIDVYHASGHGGQG 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG VV CQ ERSQ +NKA A  +LR++LYELEL KRE   +     
Sbjct: 251 VNTTDSAVRITHLPTGTVVTCQNERSQIQNKAIAMGILRSRLYELELAKREAEIDELRGP 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAI 353
           K EIG+G QIRSYVL PYQ+VKDLRT +E  +   VL DGDLD F+      
Sbjct: 311 KHEIGFGNQIRSYVLYPYQLVKDLRTGVETGNVESVLDDGDLDKFIVGYHRW 362


>gi|89890713|ref|ZP_01202222.1| peptide chain release factor 2 (RF-2) [Flavobacteria bacterium
           BBFL7]
 gi|89516858|gb|EAS19516.1| peptide chain release factor 2 (RF-2) [Flavobacteria bacterium
           BBFL7]
          Length = 386

 Score =  248 bits (633), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 145/350 (41%), Positives = 215/350 (61%), Gaps = 2/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  L      +     ++ L  KT  P  W +   A+++M+E ++     +     
Sbjct: 28  LQERVIALKDYLQIEAKEIEITNLEEKTFSPDFWNDAKAAELIMKELRNKKQWTTDYATA 87

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
                D  +L E   E D          N        E  +F+++LS E D   A L++ 
Sbjct: 88  TTLAEDTEVLYEFFKEGDASEDEVMAKYNAAV--DITEKLEFKNMLSNEGDDMSAVLQIT 145

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA ML+RMY  WA+K  +K + L    G+ AGIK+ TL I+G  ++GWLK
Sbjct: 146 AGAGGTESCDWAEMLMRMYMMWAQKNNYKVKELNFQAGDVAGIKTVTLEIEGDYSFGWLK 205

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+DSN++RHTSF+S++VYP+ DD+IEI+I+ +D + D  R+SGAGGQ+
Sbjct: 206 GENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDTIEIDINPADIKWDFARSSGAGGQN 265

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++   +TH P+G+V+   + RSQ +N+ +A  ML+++L+E+ELQKR    +  ES 
Sbjct: 266 VNKVETKAILTHHPSGIVIHNSETRSQLENREKAMQMLKSQLFEIELQKRNAARDEIESG 325

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K +I WG QIR+YV+ PY++VKD+RT  E  +   V++GD+D F+KA L 
Sbjct: 326 KMKIEWGSQIRNYVMHPYKLVKDVRTAHETGNVDAVMNGDIDAFLKAFLM 375


>gi|57239093|ref|YP_180229.1| peptide chain release factor 2 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|57161172|emb|CAH58086.1| peptide chain release factor 2 [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 367

 Score =  248 bits (633), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 171/355 (48%), Positives = 236/355 (66%), Gaps = 2/355 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           + L++ L  + G  D DN    L  LNTK  D  LW + + A  ++ ER  +   +    
Sbjct: 12  VNLNKALQLIRGYLDIDNLTSLLVDLNTKCADTSLWNDNLTAHHVLSERARISKIVGLFT 71

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           E+++       LL +   + D  +   +       +   + +  E L S EAD ND ++E
Sbjct: 72  ELEEEYQYYNELLSVISNDSDSLLDDLSKGLEALKEKVKKKE-VECLFSDEADQNDCFIE 130

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           + +GAGGTES DW+NMLLRMY RWAE    FKT+ +   DGEE G+KSA + + G NAYG
Sbjct: 131 IQSGAGGTESNDWSNMLLRMYIRWAEIYHNFKTQVVYKLDGEETGVKSAIIKVIGYNAYG 190

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           W K E G+HRLVRISP++SN++RHT+F+S+ V PV +++ +I+I + D RIDTYRASGAG
Sbjct: 191 WSKTESGIHRLVRISPFNSNAKRHTTFASVLVSPVTNENFDIQIHDKDLRIDTYRASGAG 250

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQHVN T+SAVRITHIP+G+VVQCQ  RSQH+N  +A+N+LR++LY+L+LQ++E+     
Sbjct: 251 GQHVNKTESAVRITHIPSGIVVQCQNNRSQHQNLGEAYNLLRSRLYQLKLQEKEKKMAQE 310

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            S + +IGWG QIRSYV+ PYQMVKD+RT  E  + + VLDGDLD F+ ATL  K
Sbjct: 311 HSQRCDIGWGNQIRSYVMHPYQMVKDIRTGYETGNVNSVLDGDLDAFIIATLTKK 365


>gi|225374519|ref|ZP_03751740.1| hypothetical protein ROSEINA2194_00134 [Roseburia inulinivorans DSM
           16841]
 gi|225213757|gb|EEG96111.1| hypothetical protein ROSEINA2194_00134 [Roseburia inulinivorans DSM
           16841]
          Length = 358

 Score =  248 bits (633), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 123/351 (35%), Positives = 189/351 (53%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + R   L ++  +P +  N    + LM+E+  +   +   KE +    +   
Sbjct: 1   MFDKLEDLLIRYEELMSELSEPDVANNPERFRKLMKEQSDILPIVEAYKEYKQCKQNIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   + L   K  V   +       L     D  +  +E+ AGAGG
Sbjct: 61  SLAMLEEESDEEMRELAKEELNDAKNRVAELENELKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE + +KTE +E  D    G+KS T +I G  AY  +K E GV
Sbjct: 121 DEAALFAAEIYRMYQHYAETKNWKTEIMECDDTGIGGMKSVTFMITGAGAYSVMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + ++++I E D RID  RASGAGGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMP-EAEDVDVQIDEKDIRIDVCRASGAGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+  Q E+SQ +NKA+A+ +LR KL++LE QK        E  K++IG
Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQIQNKAKAFALLRTKLFDLEQQK--AHDAEAELRKSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R N+       +++GD+ + + A +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRINLTLYKLDKIMNGDIQEIIDACIAADQ 347


>gi|51598335|ref|YP_072523.1| peptide chain release factor 2 [Borrelia garinii PBi]
 gi|51572906|gb|AAU06931.1| peptide chain release factor 2 [Borrelia garinii PBi]
          Length = 350

 Score =  248 bits (633), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 148/347 (42%), Positives = 213/347 (61%), Gaps = 4/347 (1%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG FD      ++     +    + W +   A+ +++ +  L N I   +E+ +++ 
Sbjct: 5   KAFGGSFDKKEIQDKIEKYEKEIHQKNFWNDPKRAQEVIKAQSILKNKIDPWEELINKIK 64

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   L       ++   +         ++ + +     S    E D N A+L +H+GAGG
Sbjct: 65  DLSDL---CEIVENEKDINSLEIEFNVLEKQYKNLLTISYFKEELDINSAFLTIHSGAGG 121

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+
Sbjct: 122 TEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSITIEIKGEYAYGLLKSEVGI 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRL+RISP+D+  +RHTSF+S++V PV+D+ IEI I   D RIDTYRASGAGGQHVN T 
Sbjct: 181 HRLIRISPFDAAKKRHTSFASVFVDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHVNKTS 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K ++     +  K EI 
Sbjct: 241 SAVRITHIETGIVTQSQSDRSQHKNKDMAMKVLKSRLYEYYKNKEDKKNKSKQEVKKEIS 300

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L  K
Sbjct: 301 WGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 347


>gi|47558936|gb|AAT35568.1| protein release factor 2 [Chlamydia trachomatis]
          Length = 368

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 158/350 (45%), Positives = 210/350 (60%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L       D +     L  L  +      W +V  A  +      L   +S   E+
Sbjct: 12  LLEGLALTRRSLDPEGKENELKELEQQAVQDGFWDDVARAGKISERIARLKQQLSEFNEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++++      LE      D  + +E        + ++   +   LLSGE D +  +L ++
Sbjct: 72  KNKVSTIQFFLEDEESSKDLEMQKELEKEFVFCERKITEWETLRLLSGELDRSSCFLSIN 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DW  M+LRMY RWA    ++ E ++  DGE AGIK  TL + G  AYG+ K
Sbjct: 132 AGAGGTESCDWVEMVLRMYMRWASSHSWRVEVIDRLDGEVAGIKHITLKLVGEYAYGYAK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+DSN++RHTSF+S+ V+P +DD IE+EI   D RIDTYR+SGAGGQH
Sbjct: 192 AESGVHRLVRISPFDSNAKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQH 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVRITH PTG+VV  Q ERSQ +N+    NMLRA++Y+  LQ+R E  NI   +
Sbjct: 252 VNVTDSAVRITHFPTGIVVSRQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKN 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
           K EI WG QIR+YV QPY +VKD+RT  E  +   ++DG+ LD F+KA L
Sbjct: 312 KKEISWGSQIRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYL 361


>gi|15610242|ref|NP_217621.1| peptide chain release factor 2 [Mycobacterium tuberculosis H37Rv]
 gi|31794284|ref|NP_856777.1| peptide chain release factor 2 [Mycobacterium bovis AF2122/97]
 gi|121638990|ref|YP_979214.1| peptide chain release factor 2 [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148662959|ref|YP_001284482.1| peptide chain release factor 2 [Mycobacterium tuberculosis H37Ra]
 gi|148824297|ref|YP_001289051.1| peptide chain release factor 2 [Mycobacterium tuberculosis F11]
 gi|167969713|ref|ZP_02551990.1| peptide chain release factor 2 [Mycobacterium tuberculosis H37Ra]
 gi|215405101|ref|ZP_03417282.1| peptide chain release factor 2 [Mycobacterium tuberculosis 02_1987]
 gi|215412969|ref|ZP_03421670.1| peptide chain release factor 2 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215428558|ref|ZP_03426477.1| peptide chain release factor 2 [Mycobacterium tuberculosis T92]
 gi|215432061|ref|ZP_03429980.1| peptide chain release factor 2 [Mycobacterium tuberculosis EAS054]
 gi|215447387|ref|ZP_03434139.1| peptide chain release factor 2 [Mycobacterium tuberculosis T85]
 gi|218754875|ref|ZP_03533671.1| peptide chain release factor 2 [Mycobacterium tuberculosis GM 1503]
 gi|224991482|ref|YP_002646171.1| peptide chain release factor 2 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253797794|ref|YP_003030795.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis KZN
           1435]
 gi|254233729|ref|ZP_04927054.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis C]
 gi|254365733|ref|ZP_04981778.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           str. Haarlem]
 gi|254552185|ref|ZP_05142632.1| peptide chain release factor 2 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260188141|ref|ZP_05765615.1| peptide chain release factor 2 [Mycobacterium tuberculosis CPHL_A]
 gi|260202247|ref|ZP_05769738.1| peptide chain release factor 2 [Mycobacterium tuberculosis T46]
 gi|289444669|ref|ZP_06434413.1| peptide chain release factor 2 [Mycobacterium tuberculosis T46]
 gi|289448784|ref|ZP_06438528.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           CPHL_A]
 gi|289553103|ref|ZP_06442313.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis KZN
           605]
 gi|289571312|ref|ZP_06451539.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           T17]
 gi|289575817|ref|ZP_06456044.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           K85]
 gi|289746915|ref|ZP_06506293.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           02_1987]
 gi|289751781|ref|ZP_06511159.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           T92]
 gi|289755223|ref|ZP_06514601.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           EAS054]
 gi|289759231|ref|ZP_06518609.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           T85]
 gi|289763284|ref|ZP_06522662.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis GM
           1503]
 gi|294993388|ref|ZP_06799079.1| peptide chain release factor 2 [Mycobacterium tuberculosis 210]
 gi|297635740|ref|ZP_06953520.1| peptide chain release factor 2 [Mycobacterium tuberculosis KZN
           4207]
 gi|297732739|ref|ZP_06961857.1| peptide chain release factor 2 [Mycobacterium tuberculosis KZN
           R506]
 gi|298526578|ref|ZP_07013987.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           94_M4241A]
 gi|306777415|ref|ZP_07415752.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu001]
 gi|313660071|ref|ZP_07816951.1| peptide chain release factor 2 [Mycobacterium tuberculosis KZN
           V2475]
 gi|2076680|emb|CAB08395.1| PROBABLE PEPTIDE CHAIN RELEASE FACTOR 2 PRFB (RF-2) [Mycobacterium
           tuberculosis H37Rv]
 gi|31619879|emb|CAD96819.1| PROBABLE PEPTIDE CHAIN RELEASE FACTOR 2 PRFB (RF-2) [Mycobacterium
           bovis AF2122/97]
 gi|121494638|emb|CAL73119.1| Probable peptide chain release factor 2 prfB [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|124599258|gb|EAY58362.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis C]
 gi|134151246|gb|EBA43291.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           str. Haarlem]
 gi|148507111|gb|ABQ74920.1| peptide chain release factor 2 [Mycobacterium tuberculosis H37Ra]
 gi|148722824|gb|ABR07449.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           F11]
 gi|224774597|dbj|BAH27403.1| peptide chain release factor 2 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253319297|gb|ACT23900.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis KZN
           1435]
 gi|289417588|gb|EFD14828.1| peptide chain release factor 2 [Mycobacterium tuberculosis T46]
 gi|289421742|gb|EFD18943.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           CPHL_A]
 gi|289437735|gb|EFD20228.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis KZN
           605]
 gi|289540248|gb|EFD44826.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           K85]
 gi|289545066|gb|EFD48714.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           T17]
 gi|289687443|gb|EFD54931.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           02_1987]
 gi|289692368|gb|EFD59797.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           T92]
 gi|289695810|gb|EFD63239.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           EAS054]
 gi|289710790|gb|EFD74806.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis GM
           1503]
 gi|289714795|gb|EFD78807.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           T85]
 gi|298496372|gb|EFI31666.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           94_M4241A]
 gi|308214303|gb|EFO73702.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu001]
 gi|326902672|gb|EGE49605.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           W-148]
 gi|328457573|gb|AEB02996.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis KZN
           4207]
          Length = 378

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 161/357 (45%), Positives = 219/357 (61%), Gaps = 8/357 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D +    R+  L  +  DPHLW +   A+ +  E  H    +  ++E+
Sbjct: 19  LDCTLTTVERVLDVEGLRSRIEKLEHEASDPHLWDDQTRAQRVTSELSHTQGELRRVEEL 78

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYL 119
           + RL D  +L ELA EE   +     ++    +K      +     +LLSGE D  +A +
Sbjct: 79  RRRLDDLPVLYELAAEEAGAAAADAVAEADAELKSLRADIEATEVRTLLSGEYDEREALV 138

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG
Sbjct: 139 TIRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYG 198

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG G
Sbjct: 199 TLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 258

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIP+G+VV CQ E+SQ +NK  A  +L+AKL E   +KR E     
Sbjct: 259 GQSVNTTDSAVRLTHIPSGIVVTCQNEKSQLQNKIAAMRVLQAKLLE---RKRLEERAEL 315

Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           ++ K + G  WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGDLD F++A +  +
Sbjct: 316 DALKADGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDLDGFLEAGIRWR 372


>gi|323342407|ref|ZP_08082639.1| peptide chain release factor RF2 [Erysipelothrix rhusiopathiae ATCC
           19414]
 gi|322463519|gb|EFY08713.1| peptide chain release factor RF2 [Erysipelothrix rhusiopathiae ATCC
           19414]
          Length = 347

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 152/341 (44%), Positives = 208/341 (60%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
            FD      ++  L ++  +   W +   +   +++   L   +    ++ +RL      
Sbjct: 3   HFDLAQKEAKIKELESEMVEDGFWDDHRHSSQHIQKLNQLKKVVETHHDLLERLMSCSDS 62

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           + L  EE D          ++ I+ E+E      LLS + D  +A +E+H GAGGTESQD
Sbjct: 63  ILLLKEEADEEFQNSLEVEVKEIQKEMESFSVLVLLSHDYDQKNAIVEIHPGAGGTESQD 122

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A ML RMYTRWA+   FK   L   DG+EAG+KS +  + G  AYG+LK E+GVHRLVR
Sbjct: 123 FAEMLYRMYTRWAQDHGFKISVLNYLDGDEAGLKSVSFSVSGMFAYGYLKAEKGVHRLVR 182

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+DS+ RRHTSF+S+ V P  D+SIEI I   D  +DT RA+GAGGQHVN TDSAVRI
Sbjct: 183 ISPFDSSGRRHTSFASVDVAPEFDNSIEITILPEDIDVDTMRATGAGGQHVNKTDSAVRI 242

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH  TG+VV CQ  RSQ +N+ +A  ML++KLY+ E+++++      +     I WG QI
Sbjct: 243 THKKTGIVVTCQAGRSQLQNREEALMMLKSKLYQREIEEKQAQLAAIKGEHKLIEWGSQI 302

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           RSYV  PY MVKD RT  E +   DVLDGD+DDF++A L +
Sbjct: 303 RSYVAHPYTMVKDHRTKFETSQYGDVLDGDIDDFIEAFLKM 343


>gi|289642137|ref|ZP_06474289.1| peptide chain release factor 2 [Frankia symbiont of Datisca
           glomerata]
 gi|289508100|gb|EFD29047.1| peptide chain release factor 2 [Frankia symbiont of Datisca
           glomerata]
          Length = 366

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 154/353 (43%), Positives = 219/353 (62%), Gaps = 4/353 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D   +R + L  +  DP LW +   A+ + R    +   IS ++ +
Sbjct: 12  LDATLAGIEAVLDLDTLRRRAADLEREAADPQLWSDQDRAQAVTRRLSSVRGDISRVEAL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D +     AL+  D  +L E +++L  +  ++   +  +LLSGE D  DA +++ 
Sbjct: 72  RRRLDDVIA----ALDLGDDDLLAEAANDLPTLARDISALEVRTLLSGEYDERDAIVQLS 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ DW  MLLRMY RWAE+  +  E  +  + EEAG+KSAT  IK P AYG L+
Sbjct: 128 AGAGGVDAADWTAMLLRMYLRWAERHGYAAEVFDTSEAEEAGLKSATFQIKAPYAYGTLR 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+ +RR TSF+ + V PVV+ S  +EI + + RID +R+SG GGQ 
Sbjct: 188 SEHGVHRLVRISPFDNQNRRQTSFAGVEVTPVVEQSDHVEIDDKELRIDIFRSSGPGGQG 247

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT +VV CQ ERSQ +NKA A  +L+AKL E    +           
Sbjct: 248 VNTTDSAVRITHLPTNIVVTCQNERSQLQNKAAAMIVLQAKLLERRRAEEAAEKQRLTGG 307

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             ++ +G QIR+YVL PYQMVKDLRT +E +  + VLDGD+D+F+ A +  ++
Sbjct: 308 PQDVSFGSQIRNYVLHPYQMVKDLRTEVETSGTAAVLDGDIDEFIDAEIRWRR 360


>gi|224371835|ref|YP_002605999.1| PrfB [Desulfobacterium autotrophicum HRM2]
 gi|223694552|gb|ACN17835.1| PrfB [Desulfobacterium autotrophicum HRM2]
          Length = 329

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 157/323 (48%), Positives = 208/323 (64%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
                  W +   A   ++ER  + + I    +I   + D   LLELA EE+D  + +E 
Sbjct: 1   MIAQEDFWNDPDTATAKLKERTRISDLIETWDKIFAEIEDAETLLELAHEEEDKEVEREV 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              L R+  +V+      +L GE D+  A + ++AGAGGT+SQDW  ML RMYTRW +K+
Sbjct: 61  ELQLNRLGQKVKKFSVAIMLDGEDDTKSAIVSINAGAGGTDSQDWTEMLFRMYTRWIDKK 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
             K + ++   G+EAGIK  T  + G  +YG LK E GVHRLVRISP+++  +R TSF+S
Sbjct: 121 GLKLQMIDYQPGDEAGIKGVTFSVSGEYSYGLLKVESGVHRLVRISPFNAGGKRQTSFAS 180

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           ++VYP + D I +EI E D RID YRASGAGGQHVN T SAVRITH+PTGVVVQCQQE S
Sbjct: 181 VFVYPELKDEIRVEIDEGDLRIDVYRASGAGGQHVNKTSSAVRITHLPTGVVVQCQQEPS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QH+NK  A  +L+++LY+LE +K+         +K +I WG QIRSYVL PY+MVKD RT
Sbjct: 241 QHRNKEIAMKVLQSRLYQLEKEKQNRKMQDLHDTKDDIAWGSQIRSYVLHPYRMVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351
           + E      VLDGDLD F++ TL
Sbjct: 301 DYEVGDVDRVLDGDLDQFIEETL 323


>gi|254469263|ref|ZP_05082668.1| peptide chain release factor 2 [Pseudovibrio sp. JE062]
 gi|211961098|gb|EEA96293.1| peptide chain release factor 2 [Pseudovibrio sp. JE062]
          Length = 322

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 215/309 (69%), Positives = 260/309 (84%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD++I+ +++++  L DN  L+E+   EDD S++ E    L+ +  +V   Q +
Sbjct: 1   MRERQQLDDSINGVRKLEQDLVDNQELIEMGEMEDDQSVVDEAEGALKAMLEQVNKLQLQ 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD ND Y+E+++GAGGTESQDWA+MLLRMY RW E+  +K E +E +DGEEAGI
Sbjct: 61  SLLSGEADGNDTYIEINSGAGGTESQDWASMLLRMYRRWGEQHGYKVELMEYNDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLL+KG NAYGW+K E GVHRLVRISPYDSN+RRHTSF+S+WVYPV+DDSI IEI+E
Sbjct: 121 KSATLLVKGENAYGWMKTEAGVHRLVRISPYDSNARRHTSFASVWVYPVIDDSINIEINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +DCRIDTYRASGAGGQHVNTTDSAVRITH PTG+VVQCQ ERSQHKN+A AW+MLRA+LY
Sbjct: 181 ADCRIDTYRASGAGGQHVNTTDSAVRITHNPTGIVVQCQSERSQHKNRATAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E ELQ+REE AN   +SKT+IGWG QIRSYVLQPYQ+VKDLRT +E T+PSDVLDGDLD 
Sbjct: 241 EAELQRREEQANKDAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTAPSDVLDGDLDK 300

Query: 346 FMKATLAIK 354
           FM+ATLA +
Sbjct: 301 FMEATLAHR 309


>gi|227893185|ref|ZP_04010990.1| peptide chain release factor RF2 [Lactobacillus ultunensis DSM
           16047]
 gi|227865051|gb|EEJ72472.1| peptide chain release factor RF2 [Lactobacillus ultunensis DSM
           16047]
          Length = 332

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 154/324 (47%), Positives = 204/324 (62%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +  +A+ L+ +   L        ++Q    D    LEL  EE D  + +ET 
Sbjct: 1   MAQPDFWNDQEKAQKLINDNNLLKEKRDSFLKLQKGYEDVSTALELLREEPDADLQKETE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           ++L  ++ E    + + LLSG+ D+++A LE+H GAGGTE+ DW  MLLRMY R+ +   
Sbjct: 61  NDLANLQEEFHNYELDLLLSGKYDNHNALLEIHPGAGGTEAMDWGQMLLRMYQRYCDSAG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E  +   GEEAG+KS +  I G NAYG LK E GVHRLVRISP+D+  RRHTSF+S+
Sbjct: 121 FKFEINDYEPGEEAGLKSVSARIVGKNAYGMLKSENGVHRLVRISPFDAAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P VDDSI+I+I   D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ
Sbjct: 181 EVIPEVDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A N LRAKL+ LE +K+ +     +  + EIGWG QIRSYV  PY +VKDLRT 
Sbjct: 241 LQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E    + V+DG L  F+ + L  
Sbjct: 301 YETADVNGVMDGKLQPFIYSYLQW 324


>gi|313891989|ref|ZP_07825590.1| peptide chain release factor 2 [Dialister microaerophilus UPII
           345-E]
 gi|313119632|gb|EFR42823.1| peptide chain release factor 2 [Dialister microaerophilus UPII
           345-E]
          Length = 342

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 153/336 (45%), Positives = 219/336 (65%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + +   + +  DP  W +  +A+ + ++     +A     ++ +R      LL++A+E
Sbjct: 4   LKETIRSYDIQMSDPSFWDDSEKARAISQKATQAKDAYETYTKLFERAESLQELLDMAIE 63

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           EDD  +  +    ++ +   +  K+ E LL+ E D+N+A +  HAGAGGTE+QDW  ML+
Sbjct: 64  EDDQGMEGDLKQEIEELSAILNKKEIELLLNEEYDTNNAIITFHAGAGGTEAQDWTEMLI 123

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY +WAE   +  E L +  G+EAGIKSA  +IKG  AYG LK E+GVHRLVRISP+D+
Sbjct: 124 RMYIKWAESEGYGIEELNMLPGDEAGIKSAEYIIKGEFAYGLLKSEKGVHRLVRISPFDA 183

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RRHTSFS++ V P + D IE++++ +D R+D YRASGAGGQHVN T SAVR+TH+PTG
Sbjct: 184 AKRRHTSFSAVDVMPEISDDIEVDLNMNDVRVDYYRASGAGGQHVNKTSSAVRMTHLPTG 243

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +V  CQ ERSQ +NK Q   +LRAKL+ELE++K E++    +  +  I WG QIRSYV Q
Sbjct: 244 IVAACQNERSQTQNKEQCLRILRAKLFELEMKKHEQLKKNIQGEQQAIEWGSQIRSYVFQ 303

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PY +VKD RT +E  +   V+DGDL+ F++  L  K
Sbjct: 304 PYTLVKDNRTGVETGNVQAVMDGDLNPFIEGFLKSK 339


>gi|302766928|ref|XP_002966884.1| hypothetical protein SELMODRAFT_87356 [Selaginella moellendorffii]
 gi|300164875|gb|EFJ31483.1| hypothetical protein SELMODRAFT_87356 [Selaginella moellendorffii]
          Length = 427

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 168/351 (47%), Positives = 225/351 (64%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++R +  +     W + + +L  L  + E P LW +   A    RE   L + +  I+E+
Sbjct: 72  VARSMQLVKTRMKWGDVLSKLKDLEKELEKPDLWSDTARASRYSREFGSLSSRVKEIREM 131

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L +N+ L+ELA EE D  +  E    L  ++   + K+  +LL  E D    +LEV 
Sbjct: 132 ESELVENVDLVELAREEKDEQVEAEAVSALATLRKAAKDKELLALLCEENDGCPCFLEVQ 191

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ES D+A MLLRMY  WA +R F+   ++   G+ AGIK ATL ++G  AYG+ K
Sbjct: 192 AGAGGAESMDFAAMLLRMYKLWALQRGFEAAVVDEMPGDRAGIKRATLRLEGDFAYGFAK 251

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+D   RRHTSF+++ V P+  +   EIEI+E+D  ID +R+SGAGGQ
Sbjct: 252 TEAGVHRLVRISPFDEAGRRHTSFAAVAVIPILDNAGAEIEINEADLVIDRFRSSGAGGQ 311

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSA+RI H PTG+ VQCQ ERSQHKNK  A  +LR++LY+LEL+++ E       
Sbjct: 312 HVNTTDSAIRIVHKPTGITVQCQNERSQHKNKDSAMEVLRSRLYQLELKRKTEETAQHTQ 371

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           S  EI WG QIRSYVLQPYQ+VKDLRT  E T+P+ VLDG LD F+   L+
Sbjct: 372 SLHEISWGNQIRSYVLQPYQIVKDLRTGYEVTNPTAVLDGGLDPFILQYLS 422


>gi|88658024|ref|YP_507510.1| peptide chain release factor 2, programmed frameshift [Ehrlichia
           chaffeensis str. Arkansas]
 gi|88599481|gb|ABD44950.1| peptide chain release factor 2, programmed frameshift [Ehrlichia
           chaffeensis str. Arkansas]
          Length = 366

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 171/352 (48%), Positives = 237/352 (67%), Gaps = 2/352 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           + L + L  + G  D DN    L+ L+ +     LW +   A+ ++ ER  +   ++   
Sbjct: 12  VSLGKALQLIRGHLDIDNLTSLLADLSLQCSSTSLWDDNSLAQRILCERARISKTLNSFT 71

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           E+++       LL   +  D   +L E    L ++K +V+ K+ E L S EAD ND ++E
Sbjct: 72  ELEEEYNYYTELLS-VINNDTDELLNELEAGLAKLKEKVQKKEVECLFSNEADHNDCFIE 130

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           + +GAGGTES DW++ML RMY RWAE    FKTE +   DGEE G+KSAT+ + G NAYG
Sbjct: 131 IQSGAGGTESNDWSSMLFRMYVRWAEIYHNFKTEIVHKLDGEEVGVKSATIKVIGDNAYG 190

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           W K E G+HRLVRISP++SN++RHT+FSSI V PV+++   IEI + D RIDTYRASGAG
Sbjct: 191 WAKTESGIHRLVRISPFNSNAKRHTTFSSILVSPVINEDTNIEILDKDLRIDTYRASGAG 250

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQHVN T+SAVRITHIP+G+VVQCQ  RSQH+N A+A N+L+++LY+L+LQ++E+     
Sbjct: 251 GQHVNKTESAVRITHIPSGIVVQCQNNRSQHQNLAEAHNLLKSRLYQLKLQEKEKKMAEE 310

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + +  IGWG QIRSYV+ PYQMVKD+RT  E  + + VLDG+LD F+ + L
Sbjct: 311 HNKRCNIGWGNQIRSYVMHPYQMVKDIRTGHEVGNVNSVLDGNLDSFIISAL 362


>gi|291456213|ref|ZP_06595603.1| peptide chain release factor 2 [Bifidobacterium breve DSM 20213]
 gi|291381490|gb|EFE89008.1| peptide chain release factor 2 [Bifidobacterium breve DSM 20213]
          Length = 374

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 137/353 (38%), Positives = 208/353 (58%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   + + +    D D     +  L  +   P LW N   A+ +  +    ++ +  +  
Sbjct: 12  EARAKYDSIAKALDVDRLKADIKDLEAQAAAPGLWDNPDNAQKITSKLSAAESQLKRLTS 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              R+ D   L+EL  EE D   L E  + +  I+ +++  + ++LL GE D   A + +
Sbjct: 72  ASQRIDDVETLVELGQEEQDQESLDEAQNEIGEIQKDLDQMEIQTLLDGEYDERSAVVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY R+ E+  FK + ++    EEAGIKSAT  +  P AYG L
Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+V+ +  ++I ++D R+DTY +SG GGQ
Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHVDIPDTDIRVDTYCSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVRITH+PTG+VV  Q ERSQ +N+A A  +L+++L  L  ++  +       
Sbjct: 252 GVNTTYSAVRITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVLRHEEEAKKKKELAG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD+++F++A +  +
Sbjct: 312 D-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINNFIEAGIRWR 363


>gi|199597236|ref|ZP_03210667.1| Protein chain release factor B [Lactobacillus rhamnosus HN001]
 gi|229551742|ref|ZP_04440467.1| peptide chain release factor RF2 [Lactobacillus rhamnosus LMS2-1]
 gi|258539140|ref|YP_003173639.1| peptide chain release factor B-like protein [Lactobacillus
           rhamnosus Lc 705]
 gi|199591752|gb|EDY99827.1| Protein chain release factor B [Lactobacillus rhamnosus HN001]
 gi|229314873|gb|EEN80846.1| peptide chain release factor RF2 [Lactobacillus rhamnosus LMS2-1]
 gi|257150816|emb|CAR89788.1| Peptide chain release factor 2 [Lactobacillus rhamnosus Lc 705]
          Length = 332

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 149/325 (45%), Positives = 210/325 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W +   A+ ++     L         +++ L D    LEL  +E D  +  E  
Sbjct: 1   MAEPGFWDDSEAAQKVIDANNKLKEKHDRFYALENELEDLEAGLELLQDEPDPDLQHEEE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L+ ++ +++  + + LL+G  D N+A LE+H GAGGTESQDW +ML+RMY RWA++  
Sbjct: 61  TKLKDLQEKLDQYEMQLLLNGPYDHNNAILEIHPGAGGTESQDWGSMLMRMYQRWADQNG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E  +   G+EAGIKS TLLI G NAYG LK E+GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 FKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEKGVHRLVRISPFDSAGRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D+SIE++I   D +++ +R+SGAGGQH+N T SAVR+ H+PTG+V   Q +RSQ
Sbjct: 181 DVMPELDNSIEVDIRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHLPTGIVTSSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NKA A  ML+AKLY+ E + ++  A   +  + ++ +G QIRSYV  PY MVKD RTN
Sbjct: 241 FQNKATAMAMLKAKLYQREEEAKKAKAKAIQGEQKDVAFGSQIRSYVFHPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDL+ F+ A L  +
Sbjct: 301 YETGNGQAVMDGDLNPFINAYLQWE 325


>gi|302755404|ref|XP_002961126.1| hypothetical protein SELMODRAFT_75160 [Selaginella moellendorffii]
 gi|300172065|gb|EFJ38665.1| hypothetical protein SELMODRAFT_75160 [Selaginella moellendorffii]
          Length = 427

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 168/351 (47%), Positives = 225/351 (64%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++R +  +     W + + +L  L  + E P LW +   A    RE   L + +  I+E+
Sbjct: 72  VARSMQLVKTRMKWGDVLSKLKDLEKELEKPDLWSDTARASRYSREFGSLSSRVKEIREM 131

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L +N+ L+ELA EE D  +  E    L  ++   + K+  +LL  E D    +LEV 
Sbjct: 132 ESELVENVDLVELAREEKDEQVEAEAVSALATLRKAAKDKELLALLCEENDGCPCFLEVQ 191

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ES D+A MLLRMY  WA +R F+   ++   G+ AGIK ATL ++G  AYG+ K
Sbjct: 192 AGAGGAESMDFAAMLLRMYKLWALQRGFEAAVVDEMPGDRAGIKRATLRLEGDFAYGFAK 251

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+D   RRHTSF+++ V P+  +   EIEI+E+D  ID +R+SGAGGQ
Sbjct: 252 TEAGVHRLVRISPFDEAGRRHTSFAAVAVIPILDNAGAEIEINEADLVIDRFRSSGAGGQ 311

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSA+RI H PTG+ VQCQ ERSQHKNK  A  +LR++LY+LEL+++ E       
Sbjct: 312 HVNTTDSAIRIVHKPTGITVQCQNERSQHKNKDSAMEVLRSRLYQLELKRKTEETAQHTQ 371

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           S  EI WG QIRSYVLQPYQ+VKDLRT  E T+P+ VLDG LD F+   L+
Sbjct: 372 SLHEISWGNQIRSYVLQPYQIVKDLRTGYEVTNPTAVLDGGLDPFILQYLS 422


>gi|297171212|gb|ADI22220.1| protein chain release factor B [uncultured Gemmatimonadales
           bacterium HF0200_34B24]
 gi|297171327|gb|ADI22332.1| protein chain release factor B [uncultured actinobacterium
           HF0500_01C15]
          Length = 325

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 167/324 (51%), Positives = 222/324 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W +   A+ ++ E   L   +   K +  +  +   L EL  EE+D  +  E  
Sbjct: 1   MAEPGFWDDQESARAVIDESNRLKGWVEPWKALAGKGSELEALAELLEEEEDAELAGEFE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L  ++  VE  + +++L G+ D  +A + +H GAGG ESQDWA ML+RMYTRWAE+R 
Sbjct: 61  EELAVLQKSVEALELKTMLRGDEDHREAIVTLHPGAGGLESQDWAQMLMRMYTRWAERRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+   L++   +EAGIKSATL IKG + YG+LK E+GVHRLVRISP+D+ SRRHTSF+S+
Sbjct: 121 FQVNVLDLQPAQEAGIKSATLEIKGESVYGYLKAERGVHRLVRISPFDAQSRRHTSFTSV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           +VYP+V+D IE+EI+E+D RIDTYRASGAGGQHVN TDSAVRITH PT +VV CQQERSQ
Sbjct: 181 FVYPLVEDDIEVEINEADLRIDTYRASGAGGQHVNKTDSAVRITHEPTNIVVSCQQERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           HKN++ A  MLRA LY+  L+++E+     E SK +IG+G QIRSYV QPY MV D RT 
Sbjct: 241 HKNRSTAMKMLRAALYQRALEEKEKEKAAIEESKADIGFGSQIRSYVFQPYTMVNDHRTE 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            +      V+DGDLD  ++A L  
Sbjct: 301 TKIGDVHGVMDGDLDPLIEAYLKQ 324


>gi|254458681|ref|ZP_05072105.1| peptide chain release factor 2 [Campylobacterales bacterium GD 1]
 gi|207084447|gb|EDZ61735.1| peptide chain release factor 2 [Campylobacterales bacterium GD 1]
          Length = 369

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 176/352 (50%), Positives = 233/352 (66%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ ++N + G+ + D    RL  +     D   W +   A  + +E+  L   +      
Sbjct: 13  LNLKMNNITGVVEPDKLTSRLEEIEELENDQDFWNDADNAAKIQKEKTQLQRKLDKYSIA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +D + D L L E+A EE+D   ++    +   ++  +   + E LLSGE DSN+A L +H
Sbjct: 73  KDAITDALELYEMAKEENDEDSIELCFSDASDLEQLILNMEVEVLLSGETDSNNAILSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA MLLRMY RWAE+  F  E L+   G+EAGIK A++LIKG NAYG+LK
Sbjct: 133 PGAGGTESQDWAEMLLRMYKRWAERHGFGVEVLDYQVGDEAGIKDASILIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVRISP+DSN++RHTSFSS+ V P +DD I I + + D RIDTYRASGAGGQH
Sbjct: 193 VENGIHRLVRISPFDSNAKRHTSFSSVMVSPEIDDDINIVVEDKDIRIDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+RITHI T V+VQCQ +RSQHKNKA A  MLR++LYELEL  ++         
Sbjct: 253 VNKTESAIRITHIATNVIVQCQNDRSQHKNKATAMKMLRSRLYELELAAQKAEIAGIA-- 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYV+QPYQ VKD R+N   ++ S +LDGD+D  ++  L  +
Sbjct: 311 KSEIGWGHQIRSYVMQPYQQVKDTRSNEAYSNVSGILDGDIDKMIEGVLIAQ 362


>gi|121534882|ref|ZP_01666701.1| peptide chain release factor 1 [Thermosinus carboxydivorans Nor1]
 gi|121306481|gb|EAX47404.1| peptide chain release factor 1 [Thermosinus carboxydivorans Nor1]
          Length = 356

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 120/351 (34%), Positives = 182/351 (51%), Gaps = 11/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D       +   L     DP +  N  E +   +    L   ++  +E +  L     
Sbjct: 1   MLDKLQAIEDKYLELENLISDPDIIANQSEWQKHAKAHAKLTEIVTKFREYKKVLQGMDD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             E+  E+ D    +     L  +K +    +       L     D  +  +E+ AGAGG
Sbjct: 61  AREMLKEKLDDDFREMVEAELAELKAKCVRLEEELRILMLPKDPNDEKNVIIEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE + ++ E L+ +  +  G K     I+G  AY   K E GV
Sbjct: 121 DEAALFAGDLFRMYTRYAEAQGWRVELLDANSSDLGGFKEVVFSIQGDGAYSRFKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +++ R HTS  ++ V P  DD  ++ I+ SD RIDTY ASGAGGQHVN T+
Sbjct: 181 HRVQRVPETEASGRIHTSTVTVAVLPEADDVDDVVINPSDLRIDTYCASGAGGQHVNKTE 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VVQCQ E+SQ KN+ +A  +LRAKL  LE  + E+ A + ++ K+++G
Sbjct: 241 SAVRITHLPTGIVVQCQDEKSQIKNREKAMRVLRAKL--LEAAQEEQRAQLAQTRKSQVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+GDLD+ + A +   +
Sbjct: 299 TGDRSERIRTYNF-PQGRVTDHRIGLTLHKLDFILNGDLDELINALVTADQ 348


>gi|15602055|ref|NP_245127.1| peptide chain release factor 2 [Pasteurella multocida subsp.
           multocida str. Pm70]
 gi|12720411|gb|AAK02274.1| PrfB [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 320

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 168/318 (52%), Positives = 226/318 (71%), Gaps = 1/318 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W    +A+ L +ER  L+  ++ I  +   L D   LLELA+E +D +   E    L+ +
Sbjct: 2   WNEPEKAQALGKERVALEGVVNTIHTLDQGLEDVEGLLELAIEAEDEATFHEAVAELEEL 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           + ++   +F  + SG+ D+ D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +
Sbjct: 62  EQQLAKLEFRRMFSGQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELM 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E+ DG+ AGIKSAT+ + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +
Sbjct: 122 EVSDGDVAGIKSATIKVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEI 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD I+I+I+ +D RID YRASGAGGQHVN T+SAVRITHIP+G+VVQCQ +RSQHKNK Q
Sbjct: 182 DDDIDIDINPADLRIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNDRSQHKNKDQ 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
               L+AKLYE+ELQK+       E +K++IGWG QIRSYVL     +KDLRT +E  + 
Sbjct: 242 CMKQLKAKLYEMELQKKNADKQAMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNT 300

Query: 336 SDVLDGDLDDFMKATLAI 353
             VLDGDLD F++A+L  
Sbjct: 301 QAVLDGDLDRFIEASLKA 318


>gi|227889611|ref|ZP_04007416.1| peptide chain release factor RF2 [Lactobacillus johnsonii ATCC
           33200]
 gi|268319827|ref|YP_003293483.1| Peptide chain release factor 2 [Lactobacillus johnsonii FI9785]
 gi|227849754|gb|EEJ59840.1| peptide chain release factor RF2 [Lactobacillus johnsonii ATCC
           33200]
 gi|262398202|emb|CAX67216.1| Peptide chain release factor 2 [Lactobacillus johnsonii FI9785]
          Length = 332

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 150/324 (46%), Positives = 209/324 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N  +A+ L+ +   +       K+++ +  D    LEL   + D  + +E S
Sbjct: 1   MAEPGFWDNQEQAQSLINDTNRMKEKSENFKQLEAKFDDAQTALELLKADPDPELSEELS 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  +       +   LLS + D ++A +E+H GAGGTE+ DWA+MLLRMY R+A    
Sbjct: 61  EEMVSLSQSFHDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAASHD 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
            K E  +   GEEAG+KS ++ I+G NA+G LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 LKFEIEDYEPGEEAGVKSVSIRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D SIE++I+  D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ
Sbjct: 181 EVIPEIDQSIEVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A NMLRAKL++LE +K+ +     + ++ EIG+G QIRSYV  PY MVKD RTN
Sbjct: 241 LQNRETAMNMLRAKLFQLEEEKKRKQTEELKGNQKEIGFGSQIRSYVFHPYNMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E +  + V+DG LD+F+ A L  
Sbjct: 301 FETSDVNGVMDGKLDNFIYAYLQW 324


>gi|260775420|ref|ZP_05884317.1| peptide chain release factor 2 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260608601|gb|EEX34766.1| peptide chain release factor 2 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 320

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 168/317 (52%), Positives = 228/317 (71%), Gaps = 1/317 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W     A+ L +ER  L+  +  I +++  + D   LLELA+EE+D     E    L  +
Sbjct: 2   WNEPERAQALGKERSALEAVVETIDQLEQGVEDVDGLLELAVEEEDQETFDEIEPELAEL 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           + ++E  +F  + SG+ D++D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FKTE +
Sbjct: 62  EAKLEKLEFRRMFSGDHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEVI 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E+ +GE AG+K AT+ I G  AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP +
Sbjct: 122 EVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEI 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD+I+I+I+ SD RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK Q
Sbjct: 182 DDNIDIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQ 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A   LRAKL+ELE+QK+       E +K++IGWG QIRSYVL     +KDLRT++E  + 
Sbjct: 242 AMKQLRAKLFELEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTSVENRNT 300

Query: 336 SDVLDGDLDDFMKATLA 352
             VLDGDLD F++A+L 
Sbjct: 301 QAVLDGDLDKFIEASLK 317


>gi|147669189|ref|YP_001214007.1| peptide chain release factor 2 [Dehalococcoides sp. BAV1]
 gi|146270137|gb|ABQ17129.1| bacterial peptide chain release factor 2 (bRF-2) [Dehalococcoides
           sp. BAV1]
          Length = 356

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 147/340 (43%), Positives = 208/340 (61%), Gaps = 2/340 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
           FD       ++ L T + +P  WQ+   A+  M++           + ++ R+ D   L 
Sbjct: 14  FDVSAKELEITELETASSNPDFWQDQQNAQKAMKKLAANKRTSELWRGLERRINDLTELA 73

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
            L    +D S+  E    +  +  E++  +     SG+ D+ +A L VHAGAGG ESQDW
Sbjct: 74  VL--SREDPSLSNEIEHEISGLTAELDSLEVGLAFSGQYDNRNALLTVHAGAGGVESQDW 131

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRM+ RWAEK+ F  E L+   GEEAGIKSATL I+G  AYG+LK E GVHRL+R+
Sbjct: 132 AGMLLRMFMRWAEKKGFGMEILDQSPGEEAGIKSATLQIEGEYAYGFLKSEHGVHRLIRL 191

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+D++  RHTSF+ + + P  +DS++I+I   D +ID +R+SG GGQ+V    +AVR+T
Sbjct: 192 SPFDADHARHTSFALVEIMPEAEDSVDIDIKPEDIKIDMFRSSGPGGQNVQKVSTAVRVT 251

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIP+G+VV  Q ERSQH+N+  A  +L +KL  +E+ KR E     +  +    WG QIR
Sbjct: 252 HIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKLKGERISAEWGSQIR 311

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           SYVL PY+MVKD RT+ E  +   VL+G+LD F+ A L  
Sbjct: 312 SYVLHPYKMVKDHRTDYEVGNAEAVLEGELDGFISAYLRQ 351


>gi|119358306|ref|YP_912950.1| peptide chain release factor 2 [Chlorobium phaeobacteroides DSM
           266]
 gi|119355655|gb|ABL66526.1| bacterial peptide chain release factor 2 (bRF-2) [Chlorobium
           phaeobacteroides DSM 266]
          Length = 363

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 150/345 (43%), Positives = 216/345 (62%), Gaps = 1/345 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
              GG+FD D   +++  L   T DP  W +  EA   ++E     +      +++    
Sbjct: 16  TSYGGIFDVDERKEKIDDLEKITADPGFWNDQQEANRTLKELSEHKSWTGAFDKLEAAAK 75

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
            +   L +A E  D S   E   ++  I+  +   +F ++LSG+ D  +A + +HAGAGG
Sbjct: 76  TSGEELTIADELQDESFADELIASIAAIESGIAAIEFRNMLSGKDDPGNAIITIHAGAGG 135

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDWA ML RMY RWAE++ FK    +  +G+ AGIK+ATL I+GP AYG+LK E GV
Sbjct: 136 TEAQDWAEMLYRMYMRWAERKGFKVFTDDYQEGDGAGIKTATLEIQGPYAYGYLKAENGV 195

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR+SP+DSN+RRHTSF+S++ YP     +EI++ + D  + T+R+ G GGQ+VN  +
Sbjct: 196 HRLVRVSPFDSNARRHTSFASVYTYPEAPPDVEIDVRKEDLELSTFRSGGKGGQNVNKVE 255

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           +AVRI HIP+G+VV CQQERSQ +N+ +A  ML A+LY+ + ++ +      E  K +I 
Sbjct: 256 TAVRIKHIPSGIVVGCQQERSQFQNRERAMKMLMAQLYQRQREEEDARKREIEGKKKKIE 315

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           WG QIRSYVL   + +KD RTN E+     VLDGDLD FM+  L+
Sbjct: 316 WGSQIRSYVLDD-RRIKDHRTNYERFDVETVLDGDLDTFMEKYLS 359


>gi|171741050|ref|ZP_02916857.1| hypothetical protein BIFDEN_00116 [Bifidobacterium dentium ATCC
           27678]
 gi|283455565|ref|YP_003360129.1| peptide chain release factor 2 [Bifidobacterium dentium Bd1]
 gi|171276664|gb|EDT44325.1| hypothetical protein BIFDEN_00116 [Bifidobacterium dentium ATCC
           27678]
 gi|283102199|gb|ADB09305.1| prfB Bacterial Peptide Chain Release Factor 2 (RF-2)
           [Bifidobacterium dentium Bd1]
          Length = 380

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 138/353 (39%), Positives = 211/353 (59%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   +   +    D D    +   L  +  +P LW +   A+ +  +   + + +  +  
Sbjct: 16  EARAKYESISKALDVDRLTAQAKELEVQAAEPGLWDDPENAQKITSKLSAVQSQLKRLSS 75

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              R+ D   L+EL  EE+D   L+E  + ++ I+ +++  + ++LL GE D   A + +
Sbjct: 76  ASQRIDDVETLVELGREEEDADTLEEAKNEIEGIRHDLDDMEIQTLLDGEYDERSAVVTI 135

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY RWAE+  +K + ++    EEAGIKSAT  +  P AYG +
Sbjct: 136 RSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRM 195

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+V+ +  I++ +S+ R+DTY +SG GGQ
Sbjct: 196 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQ 255

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVRITHIPTG+VV  Q ERSQ +N+A A  +L+++L  L  ++  +       
Sbjct: 256 GVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHEEEAKKKKELAG 315

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD+D F++A +  +
Sbjct: 316 D-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAGIRWR 367


>gi|42518772|ref|NP_964702.1| peptide chain release factor 2 [Lactobacillus johnsonii NCC 533]
 gi|41583058|gb|AAS08668.1| peptide chain release factor 2 (RF-2) [Lactobacillus johnsonii NCC
           533]
          Length = 332

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 149/324 (45%), Positives = 209/324 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N  +A+ L+ +   +       K+++ +  D    LEL   + D  + +E S
Sbjct: 1   MAEPGFWDNQEQAQSLINDTNRMKEKSENFKQLEAKFDDAQTALELLKADPDPELSEELS 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  +       +   LLS + D ++A +E+H GAGGTE+ DWA+MLLRMY R+A    
Sbjct: 61  EEMVSLSQSFHDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAVSHD 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
            K E  +   GEEAG+KS ++ I+G NA+G LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 LKFEIEDYEPGEEAGVKSVSIRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D SIE++I+  D RID YR+SGAGGQH+N T SAVRITH+PTG++   Q +RSQ
Sbjct: 181 EVIPEIDQSIEVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIITSSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A NMLRAKL++LE +K+ +     + ++ EIG+G QIRSYV  PY MVKD RTN
Sbjct: 241 LQNRETAMNMLRAKLFQLEEEKKRKQTEELKGNQKEIGFGSQIRSYVFHPYNMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E +  + V+DG LD+F+ A L  
Sbjct: 301 FETSDVNGVMDGKLDNFIYAYLQW 324


>gi|212716462|ref|ZP_03324590.1| hypothetical protein BIFCAT_01386 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660715|gb|EEB21290.1| hypothetical protein BIFCAT_01386 [Bifidobacterium catenulatum DSM
           16992]
          Length = 376

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 139/353 (39%), Positives = 208/353 (58%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   +   +    D D    +   L  +  +P LW +   A+ +  +   + + +  +  
Sbjct: 12  EARAKYESISKALDVDRLTAQAKDLEVQAAEPGLWDDPENAQKVTSKLSAVQSQLKRLSS 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              R+ D   L+EL  EEDD   L E    ++ I+ ++   + ++LL GE D   A + +
Sbjct: 72  ASQRIDDVETLVELGQEEDDADTLAEARSEVESIQNDLADMEIQTLLDGEYDERSAVVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY RWAE+  +K + ++    EEAGIKSAT  +  P AYG +
Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRM 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+V+ +  I++ +S+ R+DTY +SG GGQ
Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVRITHIPTG+VV  Q ERSQ +N+A A  +L+++L  L  ++  +       
Sbjct: 252 GVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHEEEAKKKKELAG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD+D F++A +  +
Sbjct: 312 D-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAGIRWR 363


>gi|270307933|ref|YP_003329991.1| peptide chain release factor 2 [Dehalococcoides sp. VS]
 gi|270153825|gb|ACZ61663.1| peptide chain release factor 2 [Dehalococcoides sp. VS]
          Length = 357

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 147/353 (41%), Positives = 208/353 (58%), Gaps = 2/353 (0%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           M L      +   FD       ++ L   +  P  WQ+   A+ +M++           +
Sbjct: 1   MNLRAAFFLIWCDFDVSAKELEITELENASASPDFWQDQQNAQRVMKKLAANKRTSELWR 60

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            ++ R+ D   L  L    +D S+  E    +  +  E+   +     SG+ D+ +A L 
Sbjct: 61  GLERRVNDLTELAVL--SYEDPSLSNEIEHEISGLTAELNSLEVGLAFSGQYDNRNALLT 118

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           VHAGAGG ESQDWA MLLRM+ RWAEK+ F  E L+   GEEAG+KSATL I G  AYG+
Sbjct: 119 VHAGAGGVESQDWAGMLLRMFMRWAEKKGFGMEILDQSPGEEAGVKSATLQIDGEYAYGF 178

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E GVHRL+R+SP+D++  RHTSF+ + + P  +DS++I+I   D +I+ +R+SG GG
Sbjct: 179 LKSEHGVHRLIRLSPFDADHARHTSFALVEIMPEAEDSVDIDIKPEDIKIEMFRSSGPGG 238

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+V    +AVRITHIP+G+VV  Q ERSQH+N+  A  +L +KL  +E+ KR E     +
Sbjct: 239 QNVQKVSTAVRITHIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKLK 298

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             +    WG QIRSYVL PY+MVKD RT+ E  +   VL+G+LD F+ A L  
Sbjct: 299 GERISAEWGNQIRSYVLHPYKMVKDHRTDYEVGNAETVLEGELDGFINAYLRQ 351


>gi|114561768|ref|YP_749281.1| peptide chain release factor 2 [Shewanella frigidimarina NCIMB 400]
 gi|114333061|gb|ABI70443.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella
           frigidimarina NCIMB 400]
          Length = 320

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 161/317 (50%), Positives = 219/317 (69%), Gaps = 1/317 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W     A+ L +ER  L   +  I ++   L D   LLELA+EEDD     + +  L+ +
Sbjct: 2   WNEPERAQALGKERAALVVVVKTIDDMDTGLEDIQGLLELAIEEDDEETFNDAAAELEEL 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
              +   +F  + SG++D+++ YL++ +G+GGTE+QDWANM+LRMY RW +   +  E +
Sbjct: 62  DTRLADLEFRRMFSGKSDASNCYLDIQSGSGGTEAQDWANMVLRMYLRWGDAHGYSPELM 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E+ DG+ AGIK AT+   G  A+GW++ E GVHRLVR SP+DS+ +RHTSF S++VYP +
Sbjct: 122 EVTDGDVAGIKGATIKFTGEYAFGWMRTETGVHRLVRKSPFDSSGKRHTSFCSVFVYPEI 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD IEI+I+ SD RIDTYRASGAGGQHVN TDSA+RITH+PT  VVQCQ +RSQHKN+  
Sbjct: 182 DDDIEIDINPSDLRIDTYRASGAGGQHVNKTDSAIRITHLPTNTVVQCQNDRSQHKNRDS 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A+  L+AKLYELE+ K+       E +K++IGWG QIRSYVL     +KDLRT +E  + 
Sbjct: 242 AFKQLKAKLYELEMHKQNADKQAAEDAKSDIGWGSQIRSYVLDD-ARIKDLRTGVENRNT 300

Query: 336 SDVLDGDLDDFMKATLA 352
             VLDGDLD F++A+L 
Sbjct: 301 QTVLDGDLDKFIEASLK 317


>gi|326330854|ref|ZP_08197155.1| peptide chain release factor 2 [Nocardioidaceae bacterium Broad-1]
 gi|325951384|gb|EGD43423.1| peptide chain release factor 2 [Nocardioidaceae bacterium Broad-1]
          Length = 372

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 154/354 (43%), Positives = 218/354 (61%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   +  +G + D D   + ++ L  +   P LW +   A  +      L   ++   E
Sbjct: 12  QLQATMQTIGQVLDLDAMRKEIADLGEQVAAPDLWDDQDNATRVTGRLSLLQGELNKFTE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  R+ D  +++E+A EE D   L E+   L R+K  VE  +  +LLSGE DS +A + +
Sbjct: 72  LSSRIEDLELMVEMAQEEGDADTLAESEAELGRVKKAVESLEIRTLLSGEYDSREALVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A ML+RMY RWAE+ K+  E  +    EEAG+KSAT  I  P AYG L
Sbjct: 132 RSGAGGVDAADFAEMLMRMYVRWAERNKYPVEVFDTSYAEEAGLKSATFAIHAPYAYGTL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V PV++ + EIEI E+D ++D YR+SG GGQ
Sbjct: 192 SVEAGTHRLVRISPFDNQGRRQTSFAAVEVVPVLEQTDEIEIDENDIKVDVYRSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG VV CQ E+SQ +NKA A  +L+AKL  L+  + E      + 
Sbjct: 252 SVNTTDSAVRLTHIPTGTVVSCQNEKSQLQNKAAAMIVLKAKLLALKKAEEEAQLKELKG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                 WG Q+R+YVL PYQ+VKDLRT  E  +P  V DGD+D F++A +  ++
Sbjct: 312 D-VAASWGDQMRNYVLNPYQIVKDLRTTYEVGNPQAVFDGDIDGFLEAGIRWRR 364


>gi|169832218|ref|YP_001718200.1| peptide chain release factor 2 [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169639062|gb|ACA60568.1| peptide chain release factor 2 [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 330

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 158/325 (48%), Positives = 208/325 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P  WQ    A+ + R    L   +     ++    D  +LLEL  E +D    +E  
Sbjct: 1   METPDFWQQQERAQEVTRRLAGLRQQVEVFDTLRRDFEDAAVLLELGEEIEDPDTAREVE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L  +   V   + E LLSG  D  +A L +HAGAGG E+QDW  ML RMY RWAEKR 
Sbjct: 61  RSLAELGRRVAALELELLLSGPYDEANAILSLHAGAGGLEAQDWVEMLFRMYLRWAEKRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  E L+I   +EAG+K+ T L+ GP AYG+L+ E+GVHRLVRISP+D+  RRHTSF+S+
Sbjct: 121 YAVEVLDILPDDEAGLKNVTFLVSGPMAYGYLRAEKGVHRLVRISPFDAGGRRHTSFASL 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P V ++  I+I+  D RIDTYR+ GAGGQHVN TDSAVRITH+PTG+VV CQ ERSQ
Sbjct: 181 DVLPEVAENTAIDINPEDLRIDTYRSGGAGGQHVNKTDSAVRITHLPTGIVVSCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             N+  A  +L+A+L +LEL++REE        + +I WG QIRSYV  PY MVKD RT 
Sbjct: 241 IANRNAAMKLLKARLLDLELRRREEEIAALRGEQPDIAWGSQIRSYVFHPYSMVKDHRTK 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            EK +   V+DG++D+F++A L  K
Sbjct: 301 FEKGNVDAVMDGEIDEFIQAYLVWK 325


>gi|258507895|ref|YP_003170646.1| peptide chain release factor 2 [Lactobacillus rhamnosus GG]
 gi|257147822|emb|CAR86795.1| Peptide chain release factor 2 [Lactobacillus rhamnosus GG]
 gi|259649221|dbj|BAI41383.1| protein chain release factor B [Lactobacillus rhamnosus GG]
          Length = 332

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 149/325 (45%), Positives = 211/325 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W +   A+ ++     L         +++ L D    LEL  +E D  + +E  
Sbjct: 1   MAEPGFWDDSEAAQKVIDANNKLKEKHDRFYALENELEDLEAGLELLQDEPDPDLQREEE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L+ ++ +++  + + LL+G  D N+A LE+H GAGGTESQDW +ML+RMY RWA++  
Sbjct: 61  TKLKDLQEKLDQYEMQLLLNGPYDHNNAILEIHPGAGGTESQDWGSMLMRMYQRWADQNG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E  +   G+EAGIKS TLLI G NAYG LK E+GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 FKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEKGVHRLVRISPFDSAGRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D+SIE++I   D +++ +R+SGAGGQH+N T SAVR+ H+PTG+V   Q +RSQ
Sbjct: 181 DVMPELDNSIEVDIRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHLPTGIVTSSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NKA A  ML+AKLY+ E + ++  A   +  + ++ +G QIRSYV  PY MVKD RTN
Sbjct: 241 FQNKATAMAMLKAKLYQREEEAKKAKAKAIQGEQKDVAFGSQIRSYVFHPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDL+ F+ A L  +
Sbjct: 301 YETGNGQAVMDGDLNPFINAYLQWE 325


>gi|315606122|ref|ZP_07881153.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 180
           str. F0310]
 gi|315312404|gb|EFU60490.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 180
           str. F0310]
          Length = 372

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 139/355 (39%), Positives = 213/355 (60%), Gaps = 3/355 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   ++ +  +   D   ++++ LN K   P LW +   A+ +     H  + +  I ++
Sbjct: 12  LRTTMDNIVAVVQPDKLREQIAELNEKAAAPDLWDDPSAAQEVTSALSHRQSELDRITQM 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSNDAYLE 120
            +R+ D   ++E+A E+ D              K   ++   +  +LL GE D  +A + 
Sbjct: 72  SERIDDLEAMVEMAAEDPDEGAEILAEAEGDLEKLRKDLGDLEIRTLLDGEYDERNAVIT 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + +GAGG ++ D+A +LLRMY RWAE+  + T+ ++    EEAG+KSAT  ++ P AYG 
Sbjct: 132 IRSGAGGVDAADFAEILLRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVQAPYAYGT 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI ES+ ++D +R+SG GG
Sbjct: 192 LSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIETTDHIEIPESELKVDVFRSSGPGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L  ++ +       
Sbjct: 252 QSVNTTDSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVLRHEEEQAKKKELA 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +  WG Q+RSYVLQPYQMVKDLRT  E  +P  V DGD+D F+ A +  +K
Sbjct: 312 GD-VKASWGDQMRSYVLQPYQMVKDLRTEFESGNPQSVFDGDIDGFINAGIRWRK 365


>gi|308176991|ref|YP_003916397.1| peptide chain release factor 2 [Arthrobacter arilaitensis Re117]
 gi|307744454|emb|CBT75426.1| peptide chain release factor 2 [Arthrobacter arilaitensis Re117]
          Length = 371

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 147/352 (41%), Positives = 217/352 (61%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L    + +  + D D     ++ L+ +   P+LW +   A+++  +  H  + +  +  +
Sbjct: 13  LRSTFSAIEDVSDVDQIKADIAVLSEEAGVPNLWDDPAAAQIVTSKLSHRQSELERLTRL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L+ELA  EDD   L E    L  I+  +   +  +LLSGE DS  A + + 
Sbjct: 73  RTRIDDLEVLVELAELEDDADTLDEAEKELVSIQKSLADLEIVTLLSGEFDSRGAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ D+A MLLRMY RWAE+R +K   ++    EEAG+KSAT  I  P A+G L 
Sbjct: 133 SGAGGVDAADFAEMLLRMYLRWAERRGYKATVMDTSYAEEAGLKSATFEIDAPYAFGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI ES+ R+D +R+SG GGQ 
Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIEQTDTIEIPESEIRVDVFRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTGVVV  Q E+SQ +N+A A  +L+++L  L+ ++ +         
Sbjct: 253 VNTTDSAVRMTHIPTGVVVSMQNEKSQIQNRAAALRVLQSRLLLLKKEQEDAQKKEFAGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  WG Q+RSYVL PYQMVKDLRT  E  +   VLDG++DDF+ A +  +
Sbjct: 313 -VKATWGDQMRSYVLNPYQMVKDLRTEHEVGNTQAVLDGEIDDFIDAGIRWR 363


>gi|21242619|ref|NP_642201.1| peptide chain release factor 2 [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|21108083|gb|AAM36737.1| peptide chain release factor 2 [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 329

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 171/318 (53%), Positives = 223/318 (70%), Gaps = 1/318 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W +   A+ L RER  L+  +  I ++   L D   LLELA  E D         +L   
Sbjct: 2   WNDAERAQALGRERSMLEKTVIGIADVLSGLADAGDLLELAESEQDEDTAVAVIADLDNY 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           +  VE  +F+ + SG+ D  +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE +
Sbjct: 62  QAHVEKLEFQRMFSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTELM 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E+  GE AGIKSAT+ I+G  AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P V
Sbjct: 122 EVSGGEVAGIKSATVRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEV 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT  VV CQ  RSQH+N+  
Sbjct: 182 DDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRDN 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A  ML AKLYELE+QKR    +  E++K++IGWG QIR+YVL     +KDLRT IE++  
Sbjct: 242 AMKMLAAKLYELEVQKRNAEKDALEATKSDIGWGSQIRNYVLD-QSRIKDLRTGIERSDT 300

Query: 336 SDVLDGDLDDFMKATLAI 353
             VLDGDLD+F++A+L  
Sbjct: 301 QKVLDGDLDEFVEASLKA 318


>gi|331270416|ref|YP_004396908.1| peptide chain release factor 2 [Clostridium botulinum BKT015925]
 gi|329126966|gb|AEB76911.1| peptide chain release factor 2 [Clostridium botulinum BKT015925]
          Length = 327

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 164/326 (50%), Positives = 229/326 (70%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++ + W ++ +A+ + +E + L + I      ++RL D  IL+E+++EEDD S ++E  
Sbjct: 1   MQESNFWDDINKAQEVTQEAKGLKDRIDKYSNTKNRLEDLKILIEMSIEEDDESSVEEIL 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + ++ I++ ++  + + LLSGE D N+A + +HAGAGGT++QDW  MLLRMYTRW+E + 
Sbjct: 61  NEVKEIQIIIDEFRVQILLSGEYDKNNAIVSLHAGAGGTDAQDWTEMLLRMYTRWSETKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K E L+I  G+EAGIKSA+L I G  AYG+LK E+G+HRLVRISP+++N +R TSF+S+
Sbjct: 121 YKVETLDILPGDEAGIKSASLKITGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASL 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + P + +S +IEI   D RIDTYRASGAGGQH+N TDSAVRITHIPTG+VVQ Q ERSQ
Sbjct: 181 EILPELTESQDIEIKSDDLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQSQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK  A +ML++KL EL+ +  +E          EIGWG QIRSYV QPY MVKD RTN
Sbjct: 241 FQNKDTAMSMLKSKLVELKERAHKEKIEDLSGDLKEIGWGSQIRSYVFQPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355
            E  +   V+DGD+D F+   L   K
Sbjct: 301 TEMGNVEAVMDGDIDIFIIEYLKANK 326


>gi|296446781|ref|ZP_06888719.1| peptide chain release factor 2 [Methylosinus trichosporium OB3b]
 gi|296255656|gb|EFH02745.1| peptide chain release factor 2 [Methylosinus trichosporium OB3b]
          Length = 322

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 202/309 (65%), Positives = 248/309 (80%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRER  +++ +  I  ++  L D L L+EL   E+D    +E    L+ +  +   +Q E
Sbjct: 1   MRERTQIEDQLGAIARLERDLDDALTLVELGESENDADTEKEGIAQLEALLKDARERQIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +L SGEAD ND Y+EVH+GAGGTES DWA ML RMY RWAE++KFK E +E   G+EAGI
Sbjct: 61  ALFSGEADGNDTYIEVHSGAGGTESCDWARMLFRMYARWAERKKFKVEVIEETSGDEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLLIKG NA+GW K E GVHRLVRISP+DSN+RRHTSF+S+WVYPVVDD I+I+++E
Sbjct: 121 KSATLLIKGMNAHGWAKTESGVHRLVRISPFDSNARRHTSFASVWVYPVVDDKIDIQVNE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYR+SGAGGQHVNTTDSA+RITHIP+G+VV CQ ERSQHKN+A AWNMLRA+LY
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAIRITHIPSGIVVACQAERSQHKNRATAWNMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KRE  AN  E+SKT+IGWG QIRSYVLQPYQ+VKDLRT     +PS+VLDG+LDD
Sbjct: 241 EMELKKREAEANAVEASKTDIGWGHQIRSYVLQPYQLVKDLRTGHTSGTPSEVLDGELDD 300

Query: 346 FMKATLAIK 354
           FM+A+LA +
Sbjct: 301 FMQASLAQR 309


>gi|24379740|ref|NP_721695.1| peptide chain release factor 2 [Streptococcus mutans UA159]
 gi|24377701|gb|AAN59001.1|AE014966_11 putative peptide chain release factor (RF-2) [Streptococcus mutans
           UA159]
          Length = 325

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 144/325 (44%), Positives = 208/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W + I A+   +E   L         +Q+   +  +L E+  E+D   +  E  
Sbjct: 1   MTEPDFWDDNIAAQKTSQELNELKLKYETFNSMQELSDETELLQEMLEEDDS--LQGELE 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           ++L ++   +   +   LLS   D+N+A LE+H G+GGTE+QDW +MLLRMYTR+   + 
Sbjct: 59  EDLVKLDKIMTSYEMTLLLSEPYDANNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK + L+   G+EAGIKS  L  +G NAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 119 FKVDVLDYQAGDEAGIKSVALSFEGQNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IE++I + D ++DT+R+ GAGGQ+VN   + VR+THIP+G+VV    +R+Q
Sbjct: 179 EVMPELDDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVVASTVDRTQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           + N+ +A  ML+AKLY++E +K+ +  +  +  K EI WG QIRSYV  PY MVKD RTN
Sbjct: 239 YGNRDRAMKMLQAKLYQMEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTN 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E +    V+DG+LD F+ A L  +
Sbjct: 299 YEVSQVDRVMDGELDGFIDAFLKWR 323


>gi|220932479|ref|YP_002509387.1| bacterial peptide chain release factor 2 (bRF-2) [Halothermothrix
           orenii H 168]
 gi|219993789|gb|ACL70392.1| bacterial peptide chain release factor 2 (bRF-2) [Halothermothrix
           orenii H 168]
          Length = 331

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 161/324 (49%), Positives = 222/324 (68%), Gaps = 1/324 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI-LQET 88
             DP LW +  +A+ + R+ + + + I  +K++ +   +  +++ELA E++       E 
Sbjct: 1   MSDPGLWDDNKKAREITRKSKVVKDRIKSLKKLDELREEAEVMIELAEEDETNRELWSEV 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            D +  ++ +++  + +  L+GE D  +A L +H GAGGTESQDWA+MLLRMY RWAE  
Sbjct: 61  EDYINSLEEKIDKMELKFRLNGEYDDCNAILSIHPGAGGTESQDWADMLLRMYVRWAESH 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +K E L+   G+EAGIK  TLLI G  +YG+LKGE+GVHRLVRISP+DS+ RRHTSF+S
Sbjct: 121 GYKVETLDYLPGDEAGIKRVTLLISGEYSYGYLKGEKGVHRLVRISPFDSSGRRHTSFAS 180

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P +DD IE++I   D +I+TYRASGAGGQHVN TDSAVRITHIPTG+VVQCQ ERS
Sbjct: 181 VNVIPEIDDDIEVDIDTGDLKIETYRASGAGGQHVNKTDSAVRITHIPTGIVVQCQNERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QHKNK  A  +L+A+L EL+ + R E          EI WG QIRSYV  PY ++KD RT
Sbjct: 241 QHKNKKMAMMILKARLLELKKEARAEKIEELRGENKEIAWGNQIRSYVFHPYNLIKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
            +E+ +   V+DG +D+F++A L 
Sbjct: 301 GLEEGNVQKVMDGYIDEFIEAYLK 324


>gi|329767964|ref|ZP_08259475.1| peptide chain release factor 2 [Gemella haemolysans M341]
 gi|328838449|gb|EGF88057.1| peptide chain release factor 2 [Gemella haemolysans M341]
          Length = 372

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 157/351 (44%), Positives = 223/351 (63%), Gaps = 1/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++++Q++        +   QR++ +     +   W +   A +L+ E + +   +    E
Sbjct: 12  EVNKQISEFKTSLKIEEKEQRVAEIENMMLEADFWNDSETASLLVTESKSIKKELDEFSE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + D L  +  ++E   +EDD  I Q+  + +  +K  VE   F  L S E D+N A LE+
Sbjct: 72  MIDYLEHSEEMVEFLKDEDDEEIYQDLLETVVNLKSSVEDFSFRLLFSEEYDNNTAILEI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGT++ DW+ ++LRMY R+  K+  K   L    G+  G+KSAT+ ++G  AYG L
Sbjct: 132 HAGAGGTDATDWSELMLRMYERFFTKQGLKYSYLNYQSGDITGVKSATIKVEGDFAYGLL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGG 240
           KGE+GVHR+VRISP+D + +RHTSF+SI V P   DD I IEI+  D +IDTYRA GAGG
Sbjct: 192 KGEKGVHRVVRISPFDPSGKRHTSFASIDVIPEFNDDEINIEINNEDLKIDTYRAQGAGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QH+NTTDSAVRITH+PTG+VVQ Q ERSQ KNK  A   L++KLY+LE++++E       
Sbjct: 252 QHINTTDSAVRITHLPTGIVVQSQAERSQIKNKDAAMKNLKSKLYQLEIEEKERELAAIR 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             + +IGWG QIRSYV  PY MVKD RTN E ++   V+DG++ DF+ A L
Sbjct: 312 GEQKDIGWGSQIRSYVFTPYTMVKDHRTNYEVSTVDKVMDGEIIDFIDAYL 362


>gi|312868547|ref|ZP_07728744.1| peptide chain release factor 2 [Lactobacillus oris PB013-T2-3]
 gi|311095918|gb|EFQ54165.1| peptide chain release factor 2 [Lactobacillus oris PB013-T2-3]
          Length = 332

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 158/325 (48%), Positives = 211/325 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +   A+ L+ +   L         ++D+L D    LEL   E D  + +E +
Sbjct: 1   MAQPDFWNDNERAQKLINDNNDLKAKRDTYVALRDQLADLETNLELLELEPDPELEKEFA 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +  + +  ++  +   LLS + DS +A LE+H GAGGTE+QDW  MLLRMY RWAE+  
Sbjct: 61  TSFAQTEEALQQYRLNQLLSEKYDSKNAILEIHPGAGGTEAQDWGEMLLRMYVRWAEQHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
              E      GE AGIKS TLLIKG NA+G+L+ E+GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 LTVETANYEPGEVAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDSAGRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDS+E++I+ +D R+DT+R+SGAGGQH+N T+SAVRITH+PTG+V   Q ERSQ
Sbjct: 181 DVMPELDDSVEVDINPADLRVDTFRSSGAGGQHINKTESAVRITHLPTGLVASSQAERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             N+  A NML++KLYELE +K+ +     E  + EIGWG QIRSYV  PY +VKD R+ 
Sbjct: 241 LLNRQTAMNMLKSKLYELEEEKKAKERAEIEGEQLEIGWGSQIRSYVFHPYTLVKDNRSG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DGDLD F+ A L  K
Sbjct: 301 HETHNGQAVMDGDLDPFINAYLQWK 325


>gi|312149296|gb|ADQ29367.1| peptide chain release factor 2 [Borrelia burgdorferi N40]
          Length = 359

 Score =  247 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 150/352 (42%), Positives = 218/352 (61%), Gaps = 4/352 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L +  +    LFD +    ++     +    + W +   A+ +++ +  L N I   +E+
Sbjct: 9   LKQAEDIWRKLFDKNEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEEL 68

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            +++ D   L       ++             ++ + +     S    E D+N+A+L +H
Sbjct: 69  INKIKDLSDL---CEIAENEKDTSGLEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIH 125

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK
Sbjct: 126 SGAGGTEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLK 184

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRL+RISP+D+  +RHTSF+S++V PV+DD IEI I   D RIDTYRASGAGGQH
Sbjct: 185 SEVGIHRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQH 244

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     + +
Sbjct: 245 VNKTSSAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDT 304

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K EI WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L  K
Sbjct: 305 KKEISWGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 356


>gi|78187873|ref|YP_375916.1| peptide chain release factor 2 [Chlorobium luteolum DSM 273]
 gi|78167775|gb|ABB24873.1| bacterial peptide chain release factor 2 (bRF-2) [Chlorobium
           luteolum DSM 273]
          Length = 363

 Score =  247 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 150/345 (43%), Positives = 224/345 (64%), Gaps = 1/345 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           N  GG+FD D   +++  L   + +P  W +   A  +++E     + +   +++  +  
Sbjct: 16  NSYGGIFDVDQRKEKIEDLEKVSGNPEFWNDQKAAHAVLKELNENRSWVEGYEKLAGKAE 75

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
                L +A E +D S  +E + ++  I+ E+   +F+++LSG+ D  +A + +HAGAGG
Sbjct: 76  SCRDELAIADELEDESFERELTASIDAIEQEIAAIEFKNMLSGKDDPGNAIITIHAGAGG 135

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDWA ML RMY RWAE++ FK    +  +G+ AGIK+ATL I+GP AYG+LK E GV
Sbjct: 136 TEAQDWAEMLYRMYMRWAERKGFKVYTDDYQEGDGAGIKTATLEIQGPYAYGYLKAENGV 195

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR+SP+DSN+RRHTSF+S++ YP     +EIE+ + D  + T+R+ G GGQ+VN  +
Sbjct: 196 HRLVRVSPFDSNARRHTSFASVYTYPEAPPDVEIEVRKEDLELSTFRSGGKGGQNVNKVE 255

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           +AVRI HIP+G+VV CQQERSQ +N+ +A  ML A+LY+ + ++ +      E  K +I 
Sbjct: 256 TAVRIKHIPSGIVVGCQQERSQFQNRERAMKMLMAQLYQRQREEEDARKREVEGKKKKIE 315

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           WG QIRSYVL   + +KD RTN E+     VLDGD+DDFM+  L+
Sbjct: 316 WGSQIRSYVLDD-RRIKDHRTNYERFDVETVLDGDIDDFMEKYLS 359


>gi|293189308|ref|ZP_06608031.1| peptide chain release factor 2 [Actinomyces odontolyticus F0309]
 gi|292821771|gb|EFF80707.1| peptide chain release factor 2 [Actinomyces odontolyticus F0309]
          Length = 373

 Score =  247 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 138/355 (38%), Positives = 212/355 (59%), Gaps = 3/355 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   +  +  +   D   ++++ LN K   P LW +   A+ +     H  + +  I ++
Sbjct: 12  LRTTMENIIAVVQPDKLREQIAELNEKAAAPDLWDDPSAAQAVTSALSHRQSELDRITQM 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSNDAYLE 120
            +R+ D   ++++A E+ D              K   ++   +  +LL GE D  +A + 
Sbjct: 72  SERIDDLEAMVDMAAEDPDEGADILAEAEADLEKLRKDLGDLEIRTLLDGEYDERNAVIT 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + +GAGG ++ D+A +LLRMY RWAE+  + T+ ++    EEAG+KSAT  ++ P AYG 
Sbjct: 132 IRSGAGGVDAADFAEILLRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVQAPYAYGT 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI ES+ ++D +R+SG GG
Sbjct: 192 LSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIETTDHIEIPESELKVDVFRSSGPGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L  ++ +       
Sbjct: 252 QSVNTTDSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVLRHEEEQAKKKELA 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +  WG Q+RSYVLQPYQMVKDLRT  E  +P  V DGD+D F+ A +  +K
Sbjct: 312 GD-VKASWGDQMRSYVLQPYQMVKDLRTEYESGNPQSVFDGDIDGFINAGIRWRK 365


>gi|218248175|ref|YP_002373546.1| hypothetical protein PCC8801_3422 [Cyanothece sp. PCC 8801]
 gi|226739124|sp|B7K0A6|RF2_CYAP8 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|218168653|gb|ACK67390.1| hypothetical protein PCC8801_3422 [Cyanothece sp. PCC 8801]
          Length = 365

 Score =  247 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 147/352 (41%), Positives = 217/352 (61%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +++ +L       D       +  L      P  W N   A+  +++   L +++    +
Sbjct: 12  QIAARLGKTQDYLDLPALNANIQDLEQIAAQPDFWDNQETAQKTLQQLNDLKSSVEEYHQ 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              +L D   + EL   E+D ++ +E   NL ++  E++  + + LLSG  DS  A L +
Sbjct: 72  WMGQLEDLKAIAELLELEEDATLNEEAEANLTQLNHELDRWELQRLLSGIYDSKGAVLTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGT++QDWA MLLRMYTRW E++ +K    EI +G+EAGIKSATL I+G  AYG+L
Sbjct: 132 NAGAGGTDAQDWAEMLLRMYTRWGEQQGYKVHLTEISEGDEAGIKSATLEIEGRYAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI-EIEISESDCRIDTYRASGAGG 240
           KGE+G HRLVRISP+++N +R TSF+ I V P +++   ++EI E D  I T R+ G GG
Sbjct: 192 KGEKGTHRLVRISPFNANGKRQTSFAGIEVMPALEEEDLKVEIPEKDLEITTTRSGGKGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN  ++AVR+ H+PTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R +      
Sbjct: 252 QNVNKVETAVRVVHLPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQAIAEIR 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E  WG QIR+YV  PYQMVKD+RTN E T  + V+DG LD F+++ L 
Sbjct: 312 GDMVEAAWGNQIRNYVFHPYQMVKDVRTNTETTDVNGVMDGKLDLFIESYLR 363


>gi|300932665|ref|ZP_07147921.1| peptide chain release factor 2 [Corynebacterium resistens DSM
           45100]
          Length = 378

 Score =  247 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 149/360 (41%), Positives = 215/360 (59%), Gaps = 8/360 (2%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++   L  +  + D +        L  +  DP LW +   A+ +  E   +   +  +K 
Sbjct: 11  EMDSTLTTIEKVLDLEALADSARELEDRAADPSLWDDPDHAQKVTSELSRVQGKLRKVKS 70

Query: 62  IQDRLCDNLILLELALEEDDCSI------LQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           ++ RL D  ++ ++A E            ++   +    ++ E+E  +  ++LSGE D  
Sbjct: 71  LRQRLEDLPVMYDMAEEAAAEDPDTADEAMEMADEERAELRKEIESLEVTTMLSGEYDQR 130

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +A + + +GAGG ++ DWA ML+RMYTRWAEK   K +  +I   EEAGIKSAT ++ G 
Sbjct: 131 EAVVNIRSGAGGVDAADWAEMLMRMYTRWAEKSGHKVDIYDISYAEEAGIKSATFVVHGE 190

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNS-RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             YG L  EQG HRLVR+SP+ S   +R TSF+ + V PVV+ +  I+I +++ R+D YR
Sbjct: 191 YMYGTLSVEQGAHRLVRLSPFGSGGDKRQTSFAEVEVLPVVEQTDHIDIPDAEVRVDVYR 250

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +SG GGQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E + Q+   
Sbjct: 251 SSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERA 310

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +   +      WG Q+RSYVL PYQMVKDLRTN E   PS VLDGDLD F++A +  +
Sbjct: 311 ELDALGAG-GNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDLDGFLEAGIRWR 369


>gi|300778963|ref|ZP_07088821.1| peptide chain release factor RF2 [Chryseobacterium gleum ATCC
           35910]
 gi|300504473|gb|EFK35613.1| peptide chain release factor RF2 [Chryseobacterium gleum ATCC
           35910]
          Length = 376

 Score =  247 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 145/353 (41%), Positives = 229/353 (64%), Gaps = 2/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++  ++  L      +     ++  + KT  P  W N   A+  +++ +     +    E
Sbjct: 15  EVQSRIEDLHRYLQIEKKKIEIANDDEKTAAPEFWDNPKTAEAFLKQLRSKKKWVESYDE 74

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I  +  D  +L + A   +D    +E  +   ++  ++E  +F+++LS E D   A L++
Sbjct: 75  IHTQFEDLQVLADFAK--EDPDSEKELDETFPQLVEKIEDLEFKNMLSNEGDELSAVLQI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGTES DWA+ML+RMYT WAEK+ +K   L   +G+ AG+K+ TL I+G  A+G+L
Sbjct: 133 TAGAGGTESCDWASMLMRMYTMWAEKQGYKIRELNFQEGDVAGVKTVTLEIEGEYAFGYL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE GVHRLVRISP+DSN++RHTSF S++VYP+VDD+IEI I+ +D   +T RASGAGGQ
Sbjct: 193 KGENGVHRLVRISPFDSNAKRHTSFVSVYVYPLVDDTIEININPADISFETMRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++AVR+ H PTG++++  + RSQ +NK +A  +LR++LYE+EL++R +  N  E+
Sbjct: 253 NVNKVETAVRLRHAPTGIIIENSESRSQLQNKEKAMQLLRSRLYEMELEERMKARNEIEA 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +K +I WG QIR+YV+ PY++VKD+R+  E +    V++G++  F+KA L   
Sbjct: 313 NKMKIEWGSQIRNYVMHPYKLVKDVRSGHETSDVDAVMNGNITPFLKAFLMAD 365


>gi|329667680|gb|AEB93628.1| peptide chain release factor 2 (RF-2) [Lactobacillus johnsonii DPC
           6026]
          Length = 332

 Score =  247 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 150/324 (46%), Positives = 209/324 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N  +A+ L+ +   +       K+++ +  D    LEL   + D  + +E S
Sbjct: 1   MAEPGFWDNQEQAQSLINDTNRMKEKSENFKQLEAKFDDAQTALELLKADPDPELSEELS 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  +       +   LLS + D ++A +E+H GAGGTE+ DWA+MLLRMY R+A    
Sbjct: 61  EEMVSLSQSFHDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAASHD 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
            K E  +   GEEAG+KS ++ I+G NA+G LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 LKFEIEDYEPGEEAGVKSVSIRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D SIE++I+  D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ
Sbjct: 181 EVIPEIDQSIEVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A NMLRAKL++LE +K+ +     + ++ EIG+G QIRSYV  PY MVKD RTN
Sbjct: 241 LQNRETAMNMLRAKLFQLEEEKKRKQTEELKGNQKEIGFGSQIRSYVFHPYNMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E +  + V+DG LD+F+ A L  
Sbjct: 301 FESSDVNGVMDGKLDNFIYAYLQW 324


>gi|168051671|ref|XP_001778277.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670374|gb|EDQ56944.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 387

 Score =  247 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 163/351 (46%), Positives = 236/351 (67%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++R ++ +    +W   + R+  L+ +   P+LW+N  +A    RER  L   +  +  +
Sbjct: 32  VARSIDLIKARLEWKKLLARVQELDVELAKPNLWENAAKAGQFSRERGALSGQVKSVISM 91

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +D L +++ L ELA EE+D  ++ + +  L  ++     ++  +LLSGE DS   ++EV 
Sbjct: 92  EDELLEHVGLAELAHEENDTQVVTDVTQGLAELRKTASERELVALLSGEHDSRSCFIEVQ 151

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA M++RMY  WA+ R ++   ++   GEEAGIK AT+ + G  AYG+ K
Sbjct: 152 AGAGGTESMDWAAMVMRMYRMWAQTRDYEVTVVDEMPGEEAGIKRATIRVDGLYAYGYAK 211

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+D+  RRHTSF+++ V P   +  + IEI ESD RI+ +RA GAGGQ
Sbjct: 212 TEAGVHRLVRISPFDAGKRRHTSFAAVAVIPALDESEVSIEIGESDLRIERFRAGGAGGQ 271

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRI HIPTG+V QCQ +RSQH+NKA A +ML+++L+++E+ +R +       
Sbjct: 272 HVNKTESAVRIIHIPTGIVTQCQADRSQHRNKATALSMLQSRLHQMEVTRRAKANAQHTQ 331

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           S +++ WG QIRSYVLQPYQMVKDLRTN E + PS +LDG++D F+ A LA
Sbjct: 332 SLSDVSWGNQIRSYVLQPYQMVKDLRTNYEVSDPSSILDGEIDGFIMAYLA 382


>gi|222823300|ref|YP_002574873.1| peptide chain release factor 2 [Campylobacter lari RM2100]
 gi|254790909|sp|B9KEY7|RF2_CAMLR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|222538521|gb|ACM63622.1| peptide chain release factor 2 [Campylobacter lari RM2100]
          Length = 366

 Score =  247 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 170/354 (48%), Positives = 232/354 (65%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL  ++  +  +   +    RL  +      P  W +V +A ++ +E+  + N +   + 
Sbjct: 12  KLKNKVGNIASIIKPEEIKARLKEIENLENSPSFWSDVKQAGIIGKEKTKISNLLKNYEN 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
             + L D   L +LA  E+D   +Q   D+   ++  +   +   LLSGE D  +A + +
Sbjct: 72  AFNALNDASELFDLANSENDLDTIQALFDDAPNLEDLIVSLEISMLLSGENDGKNAIVSI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTES DWA+ML RMY R+ E+  FK E L+  +GEEAG+K  + L+KG NAYG+L
Sbjct: 132 HPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI + D RID YRASGAGGQ
Sbjct: 192 KAENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEDKDIRIDYYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITH+P+G+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN  E 
Sbjct: 252 HVNKTESAVRITHMPSGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDEANSSE- 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            K+EIGWG QIRSYVL PYQ VKD R+N   +   ++LDGD+   ++  L  +K
Sbjct: 311 -KSEIGWGHQIRSYVLFPYQQVKDTRSNEAFSQVDNILDGDIKKMIEGVLIAQK 363


>gi|194333053|ref|YP_002014913.1| peptide chain release factor 2 [Prosthecochloris aestuarii DSM 271]
 gi|194310871|gb|ACF45266.1| peptide chain release factor 2 [Prosthecochloris aestuarii DSM 271]
          Length = 381

 Score =  247 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 152/346 (43%), Positives = 222/346 (64%), Gaps = 1/346 (0%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           LN  GG+FD D  ++++  L   T +P  W +  EA  +++E           ++I   +
Sbjct: 34  LNSYGGIFDIDERLKKIEELEQITAEPDFWNDQKEAHRIVKEINEHKTWTDDFQKIAADV 93

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
                 +E+A E +D S+  E +  +  I+ E+   + +++LSG+ D  +A L ++AGAG
Sbjct: 94  ASRQEEVEIAEELEDESLGSEIAGGIDSIEKEITALESKNMLSGKDDPGNALLTINAGAG 153

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+QDWA ML RMY RWAE++ +K    +  +GE AGIK+ATL I GP AYG+LK E G
Sbjct: 154 GTEAQDWAQMLYRMYMRWAERKGYKVFMDDYQEGEGAGIKTATLEIVGPYAYGYLKAENG 213

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVR+SP+DSN+RRHTSF+S++ YP      EI+I + D  + T+R+ G GGQ+VN  
Sbjct: 214 VHRLVRVSPFDSNARRHTSFASVYTYPEAPPDAEIDIRKEDLELSTFRSGGKGGQNVNKV 273

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++AVRI HIP+G+VV CQQERSQ +N+ +A  ML A+LY+ + ++ E      E  K +I
Sbjct: 274 ETAVRIKHIPSGIVVSCQQERSQFQNRERAIKMLMAQLYKKQREEEEARKQAVEGQKMKI 333

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            WG QIRSYV+   + +KD RTN E+     VLDGD+DDF++  L+
Sbjct: 334 EWGSQIRSYVMDD-RRIKDHRTNHERHDIEAVLDGDIDDFIEKYLS 378


>gi|315037900|ref|YP_004031468.1| peptide chain release factor 2 [Lactobacillus amylovorus GRL 1112]
 gi|325956373|ref|YP_004291785.1| peptide chain release factor 2 [Lactobacillus acidophilus 30SC]
 gi|312276033|gb|ADQ58673.1| peptide chain release factor 2 [Lactobacillus amylovorus GRL 1112]
 gi|325332938|gb|ADZ06846.1| peptide chain release factor 2 [Lactobacillus acidophilus 30SC]
 gi|327183192|gb|AEA31639.1| peptide chain release factor 2 [Lactobacillus amylovorus GRL 1118]
          Length = 332

 Score =  247 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 153/324 (47%), Positives = 204/324 (62%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +  +A+ L+ E   L        ++Q    D    +EL  EE D  + +ET 
Sbjct: 1   MAQPDFWNDQEKAQKLISENNVLKEKRDSFLKLQKGYEDESTAVELLREEPDPDLQKETE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           ++L  ++ E    + + LLSG+ DS++A +E+H GAGGTE+ DW  MLLRMY R+ +   
Sbjct: 61  EDLATLQDEFHNYELDLLLSGKYDSHNALMEIHPGAGGTEAMDWGQMLLRMYQRYCDSAG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E  +   GEEAG+KS +  I G NAYG LK E GVHRLVRISP+D+  RRHTSF+S+
Sbjct: 121 FKFEINDYEPGEEAGLKSVSARIVGKNAYGMLKSENGVHRLVRISPFDAAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDSI+I+I   D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ
Sbjct: 181 EVIPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A N LRAKL+ LE +K+ +     +  + EIGWG QIRSYV  PY +VKDLRT 
Sbjct: 241 LQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E    + V+DG L  F+ + L  
Sbjct: 301 YETADANGVMDGKLQPFIYSYLQW 324


>gi|225872704|ref|YP_002754161.1| peptide chain release factor 2, programmed frameshift
           [Acidobacterium capsulatum ATCC 51196]
 gi|225792505|gb|ACO32595.1| peptide chain release factor 2, programmed frameshift
           [Acidobacterium capsulatum ATCC 51196]
          Length = 384

 Score =  247 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 175/358 (48%), Positives = 229/358 (63%), Gaps = 5/358 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  Q+  L            L+ + TK  DP LW N   ++ LMR+R+ ++  +++  E+
Sbjct: 12  VRDQVRDLREYLCPARLRSELAAIETKLADPALWSNPQLSQPLMRDRKRIEEQLAYDTEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIK-----LEVEYKQFESLLSGEADSNDA 117
             R  D     ELA E +         +     +       VE  +  ++LSGE D+ +A
Sbjct: 72  ARRSGDIDAYFELARESEAAGEADANLEADLSREISALGEYVEKLESRTMLSGETDALNA 131

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            + VH GAGGTESQDWA ML+RMY RWAE++ FKTE  +  DGEEAGIKSAT  I G  A
Sbjct: 132 IVTVHPGAGGTESQDWAEMLMRMYLRWAEQQGFKTEMNDYQDGEEAGIKSATFTIIGDYA 191

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           +G L GE GVHRLVRISP+D   RRHTSF+S++V P +DDSI+I+I   + R DTYR+ G
Sbjct: 192 FGQLSGETGVHRLVRISPFDQAKRRHTSFASVFVSPEIDDSIQIDIKPDELRTDTYRSGG 251

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQHVNTTDSAVRITHIPTG+VVQCQ ERSQHKN+ +A  MLR++LYE EL K++    
Sbjct: 252 KGGQHVNTTDSAVRITHIPTGIVVQCQNERSQHKNREKAMKMLRSRLYEYELAKKQAETK 311

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             E SK +I +G QIRSYVLQPY++ KD RT +E      VLDG LD F++  L +++
Sbjct: 312 KLEDSKLDINFGSQIRSYVLQPYRIAKDHRTKVEVGDVDRVLDGYLDPFIRGYLTMRR 369


>gi|325925182|ref|ZP_08186595.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
           perforans 91-118]
 gi|325544436|gb|EGD15806.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
           perforans 91-118]
          Length = 329

 Score =  247 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 172/318 (54%), Positives = 224/318 (70%), Gaps = 1/318 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W +   A+ L RER  L+  +  I ++   L D   LLELA  E D         +L   
Sbjct: 2   WNDAERAQALGRERSMLEKTVIGIADVLSGLADAGDLLELAESEQDEDTALAVIADLDNY 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           +  VE  +F+ + SG+ DS +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE +
Sbjct: 62  QAHVEKLEFQRMFSGQMDSANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTELM 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E+  GE AGIKSAT+ I+G  AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P V
Sbjct: 122 EVSGGEVAGIKSATVRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEV 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT  VV CQ  RSQH+N+  
Sbjct: 182 DDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRDN 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A  ML AKLYELE+QKR    +  E++K++IGWG QIR+YVL     +KDLRT IE++  
Sbjct: 242 AMKMLAAKLYELEVQKRNAEKDALEATKSDIGWGSQIRNYVLD-QSRIKDLRTGIERSDT 300

Query: 336 SDVLDGDLDDFMKATLAI 353
             VLDGDLD+F++A+L  
Sbjct: 301 QKVLDGDLDEFVEASLKA 318


>gi|224282580|ref|ZP_03645902.1| peptide chain release factor 2 [Bifidobacterium bifidum NCIMB
           41171]
 gi|310287040|ref|YP_003938298.1| peptide chain release factor 2 with RF-1 domain [Bifidobacterium
           bifidum S17]
 gi|311063912|ref|YP_003970637.1| peptide chain release factor 2 (RF-2) PrfB [Bifidobacterium bifidum
           PRL2010]
 gi|313139738|ref|ZP_07801931.1| peptide chain release factor 2 [Bifidobacterium bifidum NCIMB
           41171]
 gi|309250976|gb|ADO52724.1| peptide chain release factor 2 with RF-1 domain [Bifidobacterium
           bifidum S17]
 gi|310866231|gb|ADP35600.1| PrfB Bacterial Peptide Chain Release Factor 2 (RF-2)
           [Bifidobacterium bifidum PRL2010]
 gi|313132248|gb|EFR49865.1| peptide chain release factor 2 [Bifidobacterium bifidum NCIMB
           41171]
          Length = 375

 Score =  246 bits (628), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 141/353 (39%), Positives = 206/353 (58%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   +   +    D +    +++ L T+   P LW +   A+ +          +  + E
Sbjct: 12  EARSKYESIAKALDIERLKSQIATLETEAAKPGLWDDPENAQKVTSRLSAAQAQLKRLNE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              R+ D   L+ELA EE D   L E    +  I  E++  + ++LL GE D   A + +
Sbjct: 72  ANRRIEDVETLVELAQEEADADSLSEAQSEIGSIAQELDDMEIQTLLDGEYDERSAVVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY R+ E+  FK + ++    EEAGIKSAT  +  P AYG L
Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+V+ +  I+I ++D R+DTY +SG GGQ
Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDTDIRVDTYCSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVRITH+PTG+VV  Q ERSQ +N+A A  +L+++L  L  ++  +       
Sbjct: 252 GVNTTYSAVRITHLPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHEEEAKKKKELAG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD+D F++A +  +
Sbjct: 312 D-IKASWGDQMRSYVLHPYQMVKDLRTGCETSQTQAVFDGDIDAFIEAGIRWR 363


>gi|148263843|ref|YP_001230549.1| peptide chain release factor 2 [Geobacter uraniireducens Rf4]
 gi|146397343|gb|ABQ25976.1| bacterial peptide chain release factor 2 (bRF-2) [Geobacter
           uraniireducens Rf4]
          Length = 317

 Score =  246 bits (628), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 161/307 (52%), Positives = 222/307 (72%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           ++ER  ++  +S       ++ D  +L+EL  E +D + L E       ++  V + +F+
Sbjct: 2   LKERTVMEKTLSAWDRFNRQVDDIRVLIELGSEAEDEATLAEVHGLNDELEKGVSHAEFQ 61

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            +LSG  D++  ++ +++GAGGTESQDWA MLLRMY R+ E++ +KTE  +   G+EAG+
Sbjct: 62  KMLSGPHDASSCFVSINSGAGGTESQDWAEMLLRMYLRYCERKGWKTEITDYQAGDEAGV 121

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K  T  + G   YG+LK E G+HRLVRISP+DSN+RRHTSF+S++V+P ++D IE++++E
Sbjct: 122 KGVTFSVSGEYGYGYLKAEAGIHRLVRISPFDSNARRHTSFASVFVFPEIEDDIEVKVNE 181

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D R+DT+R+SGAGGQHVNTTDSA+RITHIP+G+VV CQ ERSQH NKA A  +LRAKLY
Sbjct: 182 ADLRVDTFRSSGAGGQHVNTTDSAIRITHIPSGIVVACQTERSQHMNKATAMRVLRAKLY 241

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E ELQ+RE  A      K EIGWG QIRSYVL PY+MVKDLRT +E  +P  VLDGDL++
Sbjct: 242 ERELQERESQAAEIGGEKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGDLEE 301

Query: 346 FMKATLA 352
           F+ A L 
Sbjct: 302 FIVAFLM 308


>gi|297194069|ref|ZP_06911467.1| peptide chain release factor 2 [Streptomyces pristinaespiralis ATCC
           25486]
 gi|297152097|gb|EDY64812.2| peptide chain release factor 2 [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 340

 Score =  246 bits (628), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 158/339 (46%), Positives = 215/339 (63%), Gaps = 5/339 (1%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
               ++ L  +   P LW +   A+ +  +  HL   +   + ++ R+ D  IL ELA  
Sbjct: 1   MRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKTEALRGRIDDLEILFELAEA 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           EDD     E    L+ ++  ++  +  +LLSGE D  +A + + A AGG ++ D+A  L 
Sbjct: 61  EDDPDARAEAEAELESVRKALDEMEVRTLLSGEYDEREALVNIRAEAGGVDAADFAEQLQ 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RWAE+  + TE  E    EEAGIKS T ++K P AYG L  EQG HRLVRISP+D+
Sbjct: 121 RMYLRWAERHNYGTEVYETSYAEEAGIKSTTFVVKAPYAYGTLSVEQGTHRLVRISPFDN 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             RR TSF+ + V PVV+ +  IEI ES+ R+D YRASG GGQ VNTTDSAVR+THIPTG
Sbjct: 181 QGRRQTSFAGVEVLPVVEKTDHIEIDESELRVDVYRASGPGGQGVNTTDSAVRLTHIPTG 240

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG--WGRQIRSYV 316
           +VV CQ ERSQ +NKA A N+L+AKL E   ++R+E     ++ K + G  WG Q+RSYV
Sbjct: 241 IVVSCQNERSQIQNKASAMNVLQAKLLE---RRRQEEQARMDALKGDGGNSWGNQMRSYV 297

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           L PYQMVKDLRT+ E  +P  VLDG++D F++A +  +K
Sbjct: 298 LHPYQMVKDLRTDFEVGNPQSVLDGEIDGFLEAGIRWRK 336


>gi|46580270|ref|YP_011078.1| peptide chain release factor 2, programmed frameshift
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|46449687|gb|AAS96337.1| peptide chain release factor 2, programmed frameshift
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|311233748|gb|ADP86602.1| hypothetical protein Deval_1446 [Desulfovibrio vulgaris RCH1]
          Length = 371

 Score =  246 bits (628), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 170/349 (48%), Positives = 226/349 (64%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  Q + L G  D      RLS +  +   P  W N  +   +++E+  L+  I+ ++ +
Sbjct: 14  LFEQFSTLWGRLDLAGNRHRLSEIEKQLSTPDAWNNPEKLTPVLQEKSMLEGEINRLEAL 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D    L LA E++    L+   + + R++  +E  +   LLSG+ D   A LE+H
Sbjct: 74  ETCRNDVSEWLLLAEEDESAEALESLEEQIIRLEQLIEETEMNLLLSGKEDRFAALLEIH 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTE+QDWA MLLRMY RWA+   +KTE L+  DG+EAGIKS TL I GPNAYG LK
Sbjct: 134 PGAGGTEAQDWAEMLLRMYLRWADTHGYKTEYLDYLDGDEAGIKSVTLRIAGPNAYGLLK 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE+G+HRL+RISP+D++ RRHTSF+S+ V P V   I+IEI ++D RID +R+SG GGQ 
Sbjct: 194 GERGIHRLIRISPFDASGRRHTSFASVDVIPDVGQDIKIEIKDTDLRIDVFRSSGPGGQS 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT SAVR+THIPTG+V QCQ E+SQH NK  A  +LR +LYELEL+K EE       +
Sbjct: 254 VNTTSSAVRVTHIPTGIVAQCQNEKSQHHNKDSALQILRGRLYELELRKLEEEKKAQYGA 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K  IG+G QIR+Y LQPY++VKD RTN E      VLDG LD  ++  L
Sbjct: 314 KDAIGFGSQIRTYTLQPYRLVKDHRTNTEVGDVEAVLDGRLDKLLRDYL 362


>gi|319442594|ref|ZP_07991750.1| peptide chain release factor 2 [Corynebacterium variabile DSM
           44702]
          Length = 356

 Score =  246 bits (628), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 151/348 (43%), Positives = 211/348 (60%), Gaps = 7/348 (2%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           + D D    R+  L  +  DP LW +   A+ +  +  H+ + +  ++ ++ RL D  ++
Sbjct: 1   MLDLDELDDRVRELEAQAADPSLWDDPDHAQQVTSQLSHVQSRLKKVRGLRSRLDDLPVM 60

Query: 73  LELALEEDDCSILQETSD------NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            E+A E       +           L  ++ ++E  +  ++LSGE D  +A + + + AG
Sbjct: 61  YEMADEAAVEDAAEGAEAKELADAELADLRADIESLEVTTMLSGEYDDREAVVNIRSAAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G ++ DWA ML+RMYTRWAEK   K E  +I   EEAGIKSAT ++ G   YG L  EQG
Sbjct: 121 GVDAADWAEMLMRMYTRWAEKNGHKVEVYDISYAEEAGIKSATFVVHGDYMYGTLSVEQG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HRLVRISP+D+  RR TSF+ + V PVV+ S  ++I E+D R+D YR+SG GGQ VNTT
Sbjct: 181 THRLVRISPFDNQGRRQTSFAEVEVLPVVETSDHVDIDENDVRVDVYRSSGPGGQSVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVR+THIPTG+VV CQ E+SQ +NKA A  +L AKL E + Q+     +      +  
Sbjct: 241 DSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLAAKLLERKRQEEAAEMDALRGDGSN- 299

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            WG Q+RSYVL PYQMVKDLRTN E   PS VLDG +D  ++A +  +
Sbjct: 300 SWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGGIDGLLEAGIRWR 347


>gi|257060501|ref|YP_003138389.1| hypothetical protein Cyan8802_2694 [Cyanothece sp. PCC 8802]
 gi|256590667|gb|ACV01554.1| hypothetical protein Cyan8802_2694 [Cyanothece sp. PCC 8802]
          Length = 375

 Score =  246 bits (628), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 147/352 (41%), Positives = 217/352 (61%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +++ +L       D       +  L      P  W N   A+  +++   L +++    +
Sbjct: 22  QIAARLGKTQDYLDLPALNANIQDLEQIAAQPDFWDNQETAQKTLQQLNDLKSSVEEYHQ 81

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              +L D   + EL   E+D ++ +E   NL ++  E++  + + LLSG  DS  A L +
Sbjct: 82  WMGQLEDLKAIAELLELEEDATLNEEAEANLTQLNHELDRWELQRLLSGIYDSKGAVLTI 141

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGT++QDWA MLLRMYTRW E++ +K    EI +G+EAGIKSATL I+G  AYG+L
Sbjct: 142 NAGAGGTDAQDWAEMLLRMYTRWGEQQGYKVHLTEISEGDEAGIKSATLEIEGRYAYGYL 201

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI-EIEISESDCRIDTYRASGAGG 240
           KGE+G HRLVRISP+++N +R TSF+ I V P +++   ++EI E D  I T R+ G GG
Sbjct: 202 KGEKGTHRLVRISPFNANGKRQTSFAGIEVMPALEEEDLKVEIPEKDLEITTTRSGGKGG 261

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN  ++AVR+ H+PTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R +      
Sbjct: 262 QNVNKVETAVRVVHLPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQAIAEIR 321

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E  WG QIR+YV  PYQMVKD+RTN E T  + V+DG LD F+++ L 
Sbjct: 322 GDMVEAAWGNQIRNYVFHPYQMVKDVRTNTETTDVNGVMDGKLDLFIESYLR 373


>gi|326491925|dbj|BAJ98187.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 465

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 153/352 (43%), Positives = 226/352 (64%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +++ +  +     W   ++R   L    E P LW++ + A  + RE+  L   I  + + 
Sbjct: 105 VAQSIRLIKKRLKWKWLLERSKQLAVVLEKPDLWEDPVFAGKVSREQGELMGKIKSVNQF 164

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + +L +++ +L LA +E D  +  E+   L  ++ E + K+  +LLSG+ D    ++EV 
Sbjct: 165 EQQLMEHIDMLRLARDEGDNELETESMRALADMRREAKEKELNALLSGDNDPYPCFIEVQ 224

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ES DWA M++ MY  WA++R ++   +E   GE AGIK AT+ + G  A+G+ K
Sbjct: 225 AGAGGVESMDWAAMVMNMYKSWAQRRGYRVTVIEEMPGELAGIKRATIKVDGEYAFGYAK 284

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+DS  RRHTSF+++ V P+  + S   +I+ESD RI+ +R+ G GGQ
Sbjct: 285 SEIGVHRLVRISPFDSGKRRHTSFAAVAVIPILGESSSRYQINESDLRIERFRSGGPGGQ 344

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H NTT+SAVRI HIPTG    CQ ERSQH N+A A  +L+++L +LE+ ++ ++      
Sbjct: 345 HANTTESAVRIVHIPTGTTATCQNERSQHMNRASAMAVLQSRLDQLEITRQAQMNAEHTQ 404

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           S +EI WG QIRSYVLQPY+MVKDLRTN E + P  VL+GDLDDF+ + L++
Sbjct: 405 SLSEISWGNQIRSYVLQPYRMVKDLRTNYEVSDPDSVLEGDLDDFILSFLSL 456


>gi|67920292|ref|ZP_00513812.1| Peptide chain release factor 2 [Crocosphaera watsonii WH 8501]
 gi|67857776|gb|EAM53015.1| Peptide chain release factor 2 [Crocosphaera watsonii WH 8501]
          Length = 358

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 145/345 (42%), Positives = 216/345 (62%), Gaps = 1/345 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD       +  L   +  P  W     A+  ++E   L + +   ++   +L D  
Sbjct: 9   RTIFDLPALKAVIKDLENTSAQPQFWDQPETAQTTLQELNDLKSQLEQYQQWCLQLDDTK 68

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            + EL   EDD ++ QE  DN+ ++   ++  + + LLSG  D+  A L ++AGAGGT++
Sbjct: 69  AIAELLELEDDATLRQEAEDNIIQLNHNLDRWELQQLLSGIYDTKGAVLTINAGAGGTDA 128

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA MLLRMYTRW E++ +K    E+ +G+EAGIKSATL I+G  A+G+LKGE+G HRL
Sbjct: 129 QDWAQMLLRMYTRWGEQQGYKVHLTELSEGDEAGIKSATLEIEGRYAFGYLKGEKGTHRL 188

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSI-EIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           VRISP+++N +R TSF+ I + P +++   +++I + D  I T R+ G GGQ+VN  ++A
Sbjct: 189 VRISPFNANGKRQTSFAGIEIMPALEEDDLKVDIPDKDLDISTSRSGGKGGQNVNKVETA 248

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+ H+PTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R +          E  WG
Sbjct: 249 VRVVHVPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAEEQRAQEIAEIRGDIVEAAWG 308

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            QIR+YV  PYQMVKDLRTNIE T  + V+DG LD+F++A L   
Sbjct: 309 TQIRNYVFHPYQMVKDLRTNIETTDVNGVMDGSLDEFIEAYLRFD 353


>gi|183981542|ref|YP_001849833.1| peptide chain release factor 2 PrfB [Mycobacterium marinum M]
 gi|238689234|sp|B2HGJ2|RF2_MYCMM RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|183174868|gb|ACC39978.1| peptide chain release factor 2 PrfB [Mycobacterium marinum M]
          Length = 371

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 160/357 (44%), Positives = 219/357 (61%), Gaps = 8/357 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D +    R+  L  +  DP LW +   A+ +  E  H    +  ++E+
Sbjct: 12  LDSALTTVERVLDVEGLRSRIEKLEHEASDPKLWDDQTRAQRVTSELSHTQGELRRVEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYL 119
           + RL D  +L ELA EE+  +  +  ++     K      +     +LLSGE D  +A +
Sbjct: 72  RRRLEDLPVLYELAAEEEGAAAGEALAEADAEFKALRADIEATEVRTLLSGEYDEREALV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG
Sbjct: 132 TIRSGAGGVDAADWAEMLMRMYVRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG G
Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL E   +KR E     
Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKLLE---RKRIEERAEL 308

Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           ++ K + G  WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +  +
Sbjct: 309 DALKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPATVLDGDIDGFLEAGIRWR 365


>gi|309390159|gb|ADO78039.1| bacterial peptide chain release factor 2 (bRF-2) [Halanaerobium
           praevalens DSM 2228]
          Length = 365

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 162/353 (45%), Positives = 224/353 (63%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L      L  L D +   +  + +  +      W +   A+   ++   +   I  I+ 
Sbjct: 11  ELKASFQDLSDLLDREKLFETKNSIEAEMAAGGFWDDKENARQKSQQLDRIKKRIKVIQS 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++++  +  I LELA EED     +  +   +  K   + +  +  L+   D ++A L +
Sbjct: 71  LEEKFEEAEIYLELAAEEDANLNKELQNTLAELEKEIEKLEL-KLRLNEPYDDHNAILSI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA MLLRMY+RWAE   ++ E L+ + GEEAGIKS TL+I G  AYG+L
Sbjct: 130 HPGAGGTESQDWAQMLLRMYSRWAEANDYQLETLDFNPGEEAGIKSVTLMISGDYAYGYL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE+GVHRLVRISP+D++ RRHTSF+S+ V P +D  +E+EI E++ +IDTYRASGAGGQ
Sbjct: 190 KGERGVHRLVRISPFDASGRRHTSFASVDVMPEIDSDLEVEIDENNLKIDTYRASGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN TDSAVRITH PTGVVVQCQ +RSQHKNK  A  +L +KL EL+ + + E  +    
Sbjct: 250 HVNKTDSAVRITHQPTGVVVQCQNQRSQHKNKETAMKILSSKLLELKREAQAEKIDELGG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              EI WG QIRSYV  PY M+KD RT+ E+ +   V+DG LD+F+++ L  K
Sbjct: 310 EHKEIAWGSQIRSYVFHPYSMIKDHRTDFEEGNVDKVMDGYLDEFIESYLKYK 362


>gi|300853467|ref|YP_003778451.1| peptide chain release factor B [Clostridium ljungdahlii DSM 13528]
 gi|300433582|gb|ADK13349.1| peptide chain release factor B [Clostridium ljungdahlii DSM 13528]
          Length = 329

 Score =  246 bits (627), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 154/326 (47%), Positives = 220/326 (67%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           K ++P+ W ++  A+ +  E + L+  +    +++ R+ D  IL  +A EE+D S  ++ 
Sbjct: 2   KMQEPNFWDHLERAQEVTSEEKFLNEKLDMYNKLESRINDAEILAHIAEEEEDVSDCKDI 61

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              ++ I+  ++  + E LLSGE D N+A L +H G GGT++QDW  MLLRMYTRWAEK 
Sbjct: 62  LSEVEDIENIIDKLKIEILLSGEYDKNNAILNLHVGVGGTDAQDWTEMLLRMYTRWAEKS 121

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +K E L+I   ++AGIKS +L I G  AYG+LK E+G+HRLVRISP+++N +R TSF+S
Sbjct: 122 GYKVETLDILPADDAGIKSVSLRIIGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFAS 181

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P +    +I+I   D R+DTYR+SGAGGQHVN T+SAVRITHIPTG+VVQCQ ERS
Sbjct: 182 VEVLPELTKDQDIDIRPEDLRVDTYRSSGAGGQHVNKTESAVRITHIPTGIVVQCQNERS 241

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QH N+  A  ML++KL EL+ +  +E          ++GWG QIRSYV  PY +VKD RT
Sbjct: 242 QHYNRETAMLMLKSKLVELKERAHKEKIEDLAGELKDMGWGSQIRSYVFHPYTLVKDHRT 301

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
            +E  + S V+DG++D+F+ A L  +
Sbjct: 302 GVENGNVSSVMDGEIDNFILAYLRQQ 327


>gi|168185950|ref|ZP_02620585.1| peptide chain release factor 2 [Clostridium botulinum C str.
           Eklund]
 gi|169295927|gb|EDS78060.1| peptide chain release factor 2 [Clostridium botulinum C str.
           Eklund]
          Length = 326

 Score =  246 bits (627), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 158/323 (48%), Positives = 228/323 (70%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++   W ++ +A+ + +E + L + I      + R+ D  +L+E+++EE+D S ++E  
Sbjct: 1   MQESDFWDDINKAQEITQEAKGLKDRIDGYNNTKTRIEDLEVLIEISIEEEDESSIEEIL 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + ++ I++ ++  + + LLSGE D N+A + +H+GAGGT++QDW  MLLRMYTRWAEK+ 
Sbjct: 61  NEIKEIEIIIDDFKVQILLSGEYDKNNAIVSLHSGAGGTDAQDWTEMLLRMYTRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K + ++I  G+EAGIKSA+L I G  AYG+LK E+G+HRLVRISP+++N +R TSF+S+
Sbjct: 121 YKVDTIDILPGDEAGIKSASLKITGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASL 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + ++ +IEI   D R+DTYRASGAGGQH+N TDSAVRITHIPTG+VVQ Q ERSQ
Sbjct: 181 EVIPELRENQDIEIKADDLRVDTYRASGAGGQHINKTDSAVRITHIPTGIVVQSQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK  A +ML++KL EL+ +  +E          EIGWG QIRSYV QPY MVKD RTN
Sbjct: 241 FQNKDTAMSMLKSKLIELKERAHKEKIEDLSGDLKEIGWGSQIRSYVFQPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E  +   V+DGD+D+F+   L 
Sbjct: 301 TEMGNVDAVMDGDIDNFILQYLK 323


>gi|312796706|ref|YP_004029628.1| peptide Chain Release Factor 2 (RF-2) [Burkholderia rhizoxinica HKI
           454]
 gi|312168481|emb|CBW75484.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Burkholderia
           rhizoxinica HKI 454]
          Length = 320

 Score =  246 bits (627), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 166/318 (52%), Positives = 231/318 (72%), Gaps = 1/318 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W +  +A+ L RE++ LD  +  +  +   L D   L ELA EE D   L     ++Q +
Sbjct: 2   WSDSKQAQALGREKKLLDAVVQMLSALNGDLTDTQELFELASEEQDDDTLLACERDVQAL 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           +  V   +F  + +  AD N+ ++++ AGAGGTE+QDWA+MLLR Y R+ E++ FK E L
Sbjct: 62  ERRVADIEFRRMFNNPADPNNCFVDIQAGAGGTEAQDWASMLLRQYLRYCERKGFKAEVL 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E  DGE AGIK+AT+ ++G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP V
Sbjct: 122 EQSDGEVAGIKNATIKVEGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEV 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           D+SI+I+++ +D RIDT+RASGAGGQH+N TDSAVRITH+P+G+VVQCQ +RSQH+N+A+
Sbjct: 182 DESIDIDVNPADLRIDTFRASGAGGQHINKTDSAVRITHLPSGIVVQCQNDRSQHRNRAE 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A  ML+++LYE E++KR+   +  ESSKT++GWG QIRSYVL     VKDLRTN+E ++ 
Sbjct: 242 AMAMLKSRLYEAEMRKRQAEQDKLESSKTDVGWGHQIRSYVLD-QSRVKDLRTNVEISNT 300

Query: 336 SDVLDGDLDDFMKATLAI 353
             VLDGDLDDF+ A+L  
Sbjct: 301 RAVLDGDLDDFISASLKQ 318


>gi|315638344|ref|ZP_07893523.1| peptide chain release factor RF2 [Campylobacter upsaliensis JV21]
 gi|315481555|gb|EFU72180.1| peptide chain release factor RF2 [Campylobacter upsaliensis JV21]
          Length = 370

 Score =  246 bits (627), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 172/353 (48%), Positives = 232/353 (65%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L +++  +  +   D    +LS + T+  DP+ W N   A +L +E+  + N +   +  
Sbjct: 13  LEQKVKNIASIIKPDELRVKLSEIETQENDPNFWNNAKNAAILGKEKTKITNLLKAYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L ++A  E D   L+   ++  +++  +   +   LLSGE D+ +A + +H
Sbjct: 73  FNALNDANELFDMANSESDDETLKALFEDAPKLEDSITSLEISMLLSGENDNKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA+ML RMY R+ E+  FK E L+  +G+EAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGDEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDLRIDFYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT +VVQCQ +RSQHKNKA A+ MLR++LYELEL K+E  AN     
Sbjct: 253 VNKTESAVRITHIPTNIVVQCQNDRSQHKNKATAFKMLRSRLYELELMKQEAAAN--SGE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K+E+GWG QIRSYVL PYQ VKD R+N   ++   +LDGD+   ++  L   K
Sbjct: 311 KSEMGWGHQIRSYVLFPYQQVKDTRSNEAFSNAEGILDGDIKKMIEGVLIAMK 363


>gi|219559147|ref|ZP_03538223.1| peptide chain release factor 2 [Mycobacterium tuberculosis T17]
 gi|260206441|ref|ZP_05773932.1| peptide chain release factor 2 [Mycobacterium tuberculosis K85]
 gi|308369955|ref|ZP_07419655.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu002]
 gi|308371233|ref|ZP_07424282.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu003]
 gi|308372424|ref|ZP_07428636.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu004]
 gi|308373628|ref|ZP_07433110.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu005]
 gi|308374772|ref|ZP_07437352.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu006]
 gi|308375989|ref|ZP_07668163.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu007]
 gi|308377222|ref|ZP_07668462.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu008]
 gi|308378190|ref|ZP_07481848.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu009]
 gi|308379411|ref|ZP_07486192.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu010]
 gi|308380571|ref|ZP_07490411.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu011]
 gi|308406052|ref|ZP_07494953.2| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu012]
 gi|54039054|sp|P66027|RF2_MYCBO RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|54041597|sp|P66026|RF2_MYCTU RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|308325955|gb|EFP14806.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu002]
 gi|308329480|gb|EFP18331.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu003]
 gi|308333326|gb|EFP22177.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu004]
 gi|308336980|gb|EFP25831.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu005]
 gi|308340794|gb|EFP29645.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu006]
 gi|308344662|gb|EFP33513.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu007]
 gi|308348612|gb|EFP37463.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu008]
 gi|308353337|gb|EFP42188.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu009]
 gi|308357171|gb|EFP46022.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu010]
 gi|308361122|gb|EFP49973.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu011]
 gi|308364657|gb|EFP53508.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           SUMu012]
 gi|323718336|gb|EGB27514.1| peptide chain release factor 2 prfB [Mycobacterium tuberculosis
           CDC1551A]
          Length = 371

 Score =  246 bits (627), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 161/357 (45%), Positives = 219/357 (61%), Gaps = 8/357 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D +    R+  L  +  DPHLW +   A+ +  E  H    +  ++E+
Sbjct: 12  LDCTLTTVERVLDVEGLRSRIEKLEHEASDPHLWDDQTRAQRVTSELSHTQGELRRVEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYL 119
           + RL D  +L ELA EE   +     ++    +K      +     +LLSGE D  +A +
Sbjct: 72  RRRLDDLPVLYELAAEEAGAAAADAVAEADAELKSLRADIEATEVRTLLSGEYDEREALV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG
Sbjct: 132 TIRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG G
Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIP+G+VV CQ E+SQ +NK  A  +L+AKL E   +KR E     
Sbjct: 252 GQSVNTTDSAVRLTHIPSGIVVTCQNEKSQLQNKIAAMRVLQAKLLE---RKRLEERAEL 308

Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           ++ K + G  WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGDLD F++A +  +
Sbjct: 309 DALKADGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDLDGFLEAGIRWR 365


>gi|160893549|ref|ZP_02074333.1| hypothetical protein CLOL250_01103 [Clostridium sp. L2-50]
 gi|156864534|gb|EDO57965.1| hypothetical protein CLOL250_01103 [Clostridium sp. L2-50]
          Length = 329

 Score =  246 bits (627), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 163/324 (50%), Positives = 222/324 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P  W +V ++  + R+ + L +++   ++++    D   L+++A EE D S+++E  
Sbjct: 1   MEQPGFWDDVAKSTSVSRQLKKLQDSLEEYQKLEQDFSDIETLIQMAEEEGDSSMIEEIG 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L   + E E  +   LLSGE D  DA + +HAGAGGTES DW +ML RMYTRWAEK  
Sbjct: 61  EMLTAFQKEFENYRISLLLSGEFDGYDAVMTLHAGAGGTESCDWTSMLYRMYTRWAEKHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+  +G+EAGIKS T+ I G NAYG+LK E+GVHRLVRISP+++  +R TSF+S 
Sbjct: 121 FKVEVLDYLEGDEAGIKSVTIQISGQNAYGYLKSEKGVHRLVRISPFNAAGKRQTSFASC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ +E++I+E D RIDTYR+SGAGGQH+N T SAVRITHIPTG+VVQCQ ERSQ
Sbjct: 181 DVIPEIEEDLEVDINEDDLRIDTYRSSGAGGQHINKTSSAVRITHIPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK +A  ML++KLY ++ Q+  +  +       E G+G QIRSYV+QPY MVKD RT 
Sbjct: 241 HMNKDKAMQMLKSKLYLIKKQENLDKISDIRGEILENGFGSQIRSYVMQPYTMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  + + VLDG+LD FM A L  
Sbjct: 301 EESGNVAAVLDGELDGFMNAYLKW 324


>gi|78044074|ref|YP_361356.1| peptide chain release factor 1 [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|119361519|sp|Q3A928|RF1_CARHZ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|77996189|gb|ABB15088.1| peptide chain release factor 1 [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 358

 Score =  246 bits (627), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 113/351 (32%), Positives = 184/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   ++   L+    DP +  +    +  ++    ++  +   +E +  + +   
Sbjct: 1   MFDKLDQLEEKYEELSRLISDPEVIADTQRWQGYVKAHAEIEEIVQVYREYKKTVKEIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
              +  E+ D    +     L  +K   E  +       L     D  +  +E+ AGAGG
Sbjct: 61  AERMLDEKLDPDFRELVQSELHDLKERREELEAKLKILLLPKDPNDEKNVIMEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+++A++  +K E ++ H  +  G K     I+G   Y  +K E GV
Sbjct: 121 EEAALFAGDLFRMYSKYADRMGWKVEIMDSHPTDLGGFKEVIFTIEGKGVYSRMKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +E+EI+ +D RID + ASGAGGQHVN T+
Sbjct: 181 HRVQRVPTTESGGRIHTSTATVAVLP-EAEEVEVEINPNDLRIDVFCASGAGGQHVNKTE 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG+VV CQ E+SQHKNK +A  +LRA+L +   Q++E    +  + K+++G
Sbjct: 240 SAVRITHIPTGIVVTCQDEKSQHKNKERAMKILRARLLDKARQEQEAE--LASARKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       VL+GDLD+ + A +   +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTLHRLDAVLEGDLDEIIDALITTDQ 347


>gi|32033818|ref|ZP_00134103.1| COG0216: Protein chain release factor A [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307249197|ref|ZP_07531194.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307260449|ref|ZP_07542144.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306858721|gb|EFM90780.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306869852|gb|EFN01634.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
          Length = 360

 Score =  246 bits (627), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 183/344 (53%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     DP +  +  + +   +E   L+  ++     +    D      L
Sbjct: 9   LESLSERHEELQALLGDPSVINDQDKFRAYSKEYSQLEEVVTTFNRWKKLNNDIEEAQIL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   +  E     +     +E   Q   L     D  +A+LE+ AG GG E+  +A
Sbjct: 69  LDDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+ E ++++ E +  ++ E+ G K   + I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPTDLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A  +L +++ ++E +++       ++ +  +G G +   
Sbjct: 249 IPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQ--ADTRRNLLGSGDRSDK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      +V++G +D+ ++  +   +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 349


>gi|33239657|ref|NP_874599.1| peptide chain release factor 2 [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
 gi|33237182|gb|AAP99251.1| Protein chain release factor B [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
          Length = 356

 Score =  246 bits (627), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 145/342 (42%), Positives = 207/342 (60%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L  +FD          L      P  W +  +A+  MR+   + + ++ +      + D 
Sbjct: 2   LRTVFDVPVLNALQVDLEQIAAQPDFWNDQQKARKQMRQLDEVKDQLTKLANWNAAIEDA 61

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
            + LEL   E D  +++E    L ++K E++  + E LLSG  D   A L ++AGAGGT+
Sbjct: 62  KVSLELYELEPDNEMIEEAQIGLCQLKTELDLWELERLLSGPYDKEGAVLAINAGAGGTD 121

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA MLLRMY RWAE    K    E+ +GEEAGIKSAT+ I+G  AYG+L+ E+G HR
Sbjct: 122 AQDWAQMLLRMYMRWAESHGMKVILSELSEGEEAGIKSATIEIEGRYAYGYLQNEKGTHR 181

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+++N +R TSF+ I V P +++ + +EI E D  + T R+ GAGGQ+VN  ++A
Sbjct: 182 LVRISPFNANGKRQTSFAGIEVMPQLEEDVHLEIPEKDLEVTTSRSGGAGGQNVNKVETA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRI HIPTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R            E  WG
Sbjct: 242 VRILHIPTGLAVRCTQERSQLQNKEKAMALLKAKLMIIAQEQRAAEIADIRGDIVEAAWG 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIR+YV  PYQMVKDLR+  E      V++GDLD F+++ L
Sbjct: 302 NQIRNYVFHPYQMVKDLRSGTESNDVESVMNGDLDLFIQSLL 343


>gi|194337758|ref|YP_002019552.1| peptide chain release factor 2 [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|194310235|gb|ACF44935.1| peptide chain release factor 2 [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 363

 Score =  246 bits (627), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 149/345 (43%), Positives = 223/345 (64%), Gaps = 1/345 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           N  GG+FD D   +++  L   + DP  W +   A  +++E     +     ++I  +  
Sbjct: 16  NSYGGIFDVDERKEKIEDLEKISFDPAFWNDQKAANKVLKELNEHKSWTDAYEKIILKAR 75

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
                 ++A+E DD S  +E +  +  I+ ++   +F+++LSG+ D+ +A + +HAGAGG
Sbjct: 76  SCQDEFDIAIELDDESFGEELTALIASIEHDISAIEFKNMLSGKDDAGNAMITIHAGAGG 135

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDWA ML RMY RWAE++ FK    +  +G+ AGIK+ATL I+GP AYG+LK E GV
Sbjct: 136 TEAQDWAEMLYRMYMRWAERKGFKIYTDDYQEGDGAGIKTATLEIEGPYAYGYLKAENGV 195

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR+SP+DSN+RRHTSF+S++ YP     +EI++ + D  + T+R+ G GGQ+VN  +
Sbjct: 196 HRLVRVSPFDSNARRHTSFASVFTYPEAPPDVEIDVRKEDLELSTFRSGGKGGQNVNKVE 255

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           +AVRI H+PTG+VV CQ+ERSQ +N+ +A  ML A+LY+ +  + +      E  K +I 
Sbjct: 256 TAVRIKHLPTGIVVGCQEERSQFQNRERAMKMLMAQLYQRQRDEEDARKREIEGKKKKIE 315

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           WG QIRSYVL   + +KD RTN E+     VLDGDLD+FM+  L+
Sbjct: 316 WGSQIRSYVLDD-RRIKDHRTNYERFDVETVLDGDLDEFMEKYLS 359


>gi|329769029|ref|ZP_08260451.1| peptide chain release factor 2 [Gemella sanguinis M325]
 gi|328839520|gb|EGF89096.1| peptide chain release factor 2 [Gemella sanguinis M325]
          Length = 372

 Score =  246 bits (627), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 155/351 (44%), Positives = 221/351 (62%), Gaps = 1/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ +++         ++  QR++ +     D   W +   A  L+ E + +   +     
Sbjct: 12  EIEKRITEFKTSLKIEDKEQRVAEIENMMLDADFWNDSDNASALVTESKSIKKELDEFSN 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + D L  +  ++E   +E+D  I  +  + +  +K  VE   F  L S E D+N+A L++
Sbjct: 72  MLDYLEHSQEMVEFLRDEEDKEIYNDLEETVATLKDSVEDFSFRLLFSEEYDNNNAILDI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGT++ DWA ++LRMY R+  K+  K   L    G+  G+KSAT+ ++G  AYG L
Sbjct: 132 HAGAGGTDATDWAEIMLRMYERFFSKQGLKYSYLNYQSGDITGVKSATIKVEGDFAYGLL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGG 240
           KGE+GVHR++RISP+D + +RHTSF+SI V P   DD I IEI+  D +IDTYRA GAGG
Sbjct: 192 KGEKGVHRVIRISPFDPSGKRHTSFASIDVMPEFSDDEINIEINNDDLKIDTYRAQGAGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QH+NTTDSAVRITH+PTG+VVQ Q ERSQ KNK  A   L++KLY+LEL+++E+      
Sbjct: 252 QHINTTDSAVRITHLPTGIVVQSQAERSQIKNKDTAMKNLKSKLYQLELEEKEKELASIR 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             + +IGWG QIRSYV  PY MVKD RTN E ++   V+DGD+ DF+ A L
Sbjct: 312 GEQKDIGWGSQIRSYVFTPYTMVKDHRTNYEVSTVDKVMDGDIIDFIDAYL 362


>gi|110597266|ref|ZP_01385554.1| peptide chain release factor 2 [Chlorobium ferrooxidans DSM 13031]
 gi|110341102|gb|EAT59570.1| peptide chain release factor 2 [Chlorobium ferrooxidans DSM 13031]
          Length = 363

 Score =  246 bits (627), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 155/345 (44%), Positives = 223/345 (64%), Gaps = 1/345 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           N  GG+FD D   +++  L   T DP  W +  EA  +++E           +++  +  
Sbjct: 16  NSYGGIFDVDQRKEKVEDLEKITADPAFWNDQKEAHKILKELNEHKTWTEGYEKLAAKEK 75

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             L  LE+A E +D S   E S  +  I+ E+   +F+++LSG+ D+ +A + +HAGAGG
Sbjct: 76  VCLDELEIASELEDESFSDELSTAIAEIEQEIAAIEFKNMLSGKDDAGNALITIHAGAGG 135

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDWA ML RMY RWAE++ FK    +  +G+ AGIK+ATL I+G  AYG+LK E GV
Sbjct: 136 TEAQDWAEMLYRMYMRWAERKGFKIYTDDYQEGDGAGIKTATLEIQGAYAYGYLKAENGV 195

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR+SPYDSN+RRHTSF+S++ YP     +EIE+ + D  + T+R+ G GGQ+VN  +
Sbjct: 196 HRLVRVSPYDSNARRHTSFASVYTYPEAPPDVEIEVRKEDLELSTFRSGGKGGQNVNKVE 255

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           +AVRI H+PTG+VV CQ+ERSQ +N+ +A  ML A+LY+ + ++ +      E  K +I 
Sbjct: 256 TAVRIKHLPTGIVVGCQEERSQFQNRERAMKMLMAQLYQRQREEEDAKKREIEGKKKKIE 315

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           WG QIRSYVL   + +KD RTN E+     VLDGDLD+FM+  L+
Sbjct: 316 WGSQIRSYVLDD-RRIKDHRTNYERFDVETVLDGDLDEFMEHYLS 359


>gi|312898633|ref|ZP_07758023.1| peptide chain release factor 2 [Megasphaera micronuciformis F0359]
 gi|310620552|gb|EFQ04122.1| peptide chain release factor 2 [Megasphaera micronuciformis F0359]
          Length = 338

 Score =  246 bits (627), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 151/323 (46%), Positives = 211/323 (65%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           +  DP  W +   AK + +E   L   +    ++ +   D   L +LA E++D S   E 
Sbjct: 2   RMSDPDFWNSPDTAKAVSQEATKLKEEVQGHDDLVNEAADLSELYDLAAEDEDTSFTGEI 61

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
                R+  E+E ++   LLSGE DS +A +  HAGAGGTE+QDW  M++RMY+RWAE+ 
Sbjct: 62  ERQYYRLVKELEKREVLLLLSGEYDSCNAIMAFHAGAGGTEAQDWTQMIVRMYSRWAEQH 121

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +    ++   G+EAG KS    ++G NAYG+LK E+GVHRLVRISP+D+N RRHTSF++
Sbjct: 122 GYTIRMIDYQPGDEAGTKSCAFTVEGENAYGYLKSEKGVHRLVRISPFDTNGRRHTSFTA 181

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P + D  E+EI+  D R+D +RASGAGGQHVN T SAVR+THIPTG+VVQCQ ERS
Sbjct: 182 VDVMPELPDDAEVEINMDDVRVDYFRASGAGGQHVNKTSSAVRMTHIPTGIVVQCQNERS 241

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q +N+      LRAKL+ELE +K+E++      ++  I WG QIRSYV  PY +VKD RT
Sbjct: 242 QIQNREMCMKYLRAKLFELEEEKKEKLRAELTGTQQSIEWGSQIRSYVFHPYNLVKDHRT 301

Query: 329 NIEKTSPSDVLDGDLDDFMKATL 351
            +E ++   V+DG++D F++  L
Sbjct: 302 GVETSNIQSVMDGNIDMFIEGYL 324


>gi|307244800|ref|ZP_07526899.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307253754|ref|ZP_07535608.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307258211|ref|ZP_07539954.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306854245|gb|EFM86451.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306863238|gb|EFM95178.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306867671|gb|EFM99516.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
          Length = 360

 Score =  245 bits (626), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 183/344 (53%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     DP +  +  + +   +E   L+  ++     +    D      L
Sbjct: 9   LESLSERHEELQALLGDPSVINDQDKFRAYSKEYSQLEEVVTTFNRWKKLNNDIEEAQIL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   +  E     +     +E   Q   L     D  +A+LE+ AG GG E+  +A
Sbjct: 69  LDDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+ E ++++ E +  ++ E+ G K   + I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A  +L +++ ++E +++       ++ +  +G G +   
Sbjct: 249 IPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQ--ADTRRNLLGSGDRSDK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      +V++G +D+ ++  +   +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 349


>gi|297172687|gb|ADI23654.1| protein chain release factor B [uncultured Gemmatimonadales
           bacterium HF4000_15H13]
          Length = 328

 Score =  245 bits (626), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 167/323 (51%), Positives = 224/323 (69%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W     AK ++ E   + + +   + +  R+ +   L+EL  EEDD  + +E +
Sbjct: 1   MAQPGFWDKQEAAKAVIEESNSIKSWLEPWQALDGRVSELRALVELLEEEDDEELAEEFA 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             +  +   VE  +  ++L G+ D   A + +H GAGGTESQDWA ML+RMYTRWAE+  
Sbjct: 61  SGVDELTKGVEALELRTMLQGDDDHRGAIITIHPGAGGTESQDWAQMLVRMYTRWAERGG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F    L++   EEAGIKSATL I G +AYG+LK E GVHRLVRISP+D+ +RRHTSF+S+
Sbjct: 121 FTVNVLDLQPAEEAGIKSATLEINGESAYGFLKAEGGVHRLVRISPFDAQARRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           ++YP VDDSIEIEI++ D R+DTYRASGAGGQHVN TDSAVR+TH PTG+VVQCQQERSQ
Sbjct: 181 FIYPQVDDSIEIEINDDDLRVDTYRASGAGGQHVNKTDSAVRLTHAPTGIVVQCQQERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           HKN+A A  ML A+LY+  L+++++   + E+SK +IG+G QIRSYV QPY MV D RT 
Sbjct: 241 HKNRATAMKMLLARLYQHALEEKKKERAVLEASKRDIGFGNQIRSYVFQPYTMVNDHRTE 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
           ++ T    V+DG +D F++A L 
Sbjct: 301 LKITDVQSVMDGAIDPFIEAYLK 323


>gi|34556562|ref|NP_906377.1| peptide chain release factor 2 [Wolinella succinogenes DSM 1740]
 gi|81833248|sp|Q7MAP4|RF2_WOLSU RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|34482276|emb|CAE09277.1| PEPTIDE CHAIN RELEASE FACTOR 2 [Wolinella succinogenes]
          Length = 368

 Score =  245 bits (626), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 175/353 (49%), Positives = 242/353 (68%), Gaps = 2/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LS + + +  +   D+   RL  +         W +  +A  + +E++ L+  +   +E
Sbjct: 12  ELSTKRDNIAKIIKPDSIENRLGEIEALEHSEGFWNDATKAGEVQKEKRKLERILKKYEE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
               + D   L E+A +++D   L    +    ++ E++  + E +LSGE D ++A + +
Sbjct: 72  ANQAINDAKELFEIATQDNDEETLGLLFEESGHLEKEIKSVEIEVMLSGEHDGSNAIITI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA++L RMY RWAE+R FK E L+  +GEEAGIK A+ +IKG NAYG+L
Sbjct: 132 HPGAGGTESQDWASILYRMYLRWAERRGFKVEVLDYQEGEEAGIKDASFIIKGENAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVRISP+D+N++RHTSF+S+ V P VDD I+IEI E D R+DTYRASGAGGQ
Sbjct: 192 KVENGIHRLVRISPFDANAKRHTSFTSVMVSPEVDDDIDIEIEEKDLRLDTYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SA+RITHIPTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL KR    +  E 
Sbjct: 252 HVNKTESAIRITHIPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELAKRSAEYDSME- 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K+EIGWG QIRSYVL PYQ VKD R+NI  ++   +LDGDLD+ ++  L  +
Sbjct: 311 -KSEIGWGHQIRSYVLAPYQQVKDTRSNIAYSNIEAILDGDLDELLEGVLISQ 362


>gi|159902739|ref|YP_001550083.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9211]
 gi|159887915|gb|ABX08129.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT
           9211]
          Length = 356

 Score =  245 bits (626), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 146/342 (42%), Positives = 205/342 (59%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L  +FD          L      P  W +  +AK  MR    +   +  + +    + D 
Sbjct: 2   LRTVFDVPALNALRKDLEQIASQPEFWNDQQKAKKEMRRLDEVKAQLKKLVDWDAAIEDA 61

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
            + LEL   E D  +L E    L  +K +++  + E LLSG+ D     L ++AGAGGT+
Sbjct: 62  QVSLELYELEPDDEMLAEAIKGLDNLKSDLDLWELERLLSGQYDKEGVVLSINAGAGGTD 121

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWA MLLRMYTRWA+    K    E+ +GEEAGIKSATL I G  AYG+L+ E+G HR
Sbjct: 122 AQDWAQMLLRMYTRWADDHGMKVTVDELSEGEEAGIKSATLEIDGRYAYGYLQNEKGTHR 181

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+++N +R TSF+ + + P +++ +E++I E D  I T R+ GAGGQ+VN  ++A
Sbjct: 182 LVRISPFNANGKRQTSFAGVEIMPKLEEEVELDIPEKDLEITTSRSGGAGGQNVNKVETA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRI H+P+G+ V+C QERSQ +NK +A  +L+AKL  +  ++R            E  WG
Sbjct: 242 VRIVHLPSGLAVRCTQERSQLQNKEKAMALLKAKLMIIAQEQRASQIADIRGDIVEAAWG 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            QIR+YV  PYQMVKDLRT  E T    V++GDLD F++A L
Sbjct: 302 NQIRNYVFHPYQMVKDLRTGKESTDVEGVMNGDLDPFIQALL 343


>gi|57168993|ref|ZP_00368122.1| peptide chain release factor 2 [Campylobacter coli RM2228]
 gi|305432246|ref|ZP_07401409.1| peptide chain release factor RF2 [Campylobacter coli JV20]
 gi|57019659|gb|EAL56348.1| peptide chain release factor 2 [Campylobacter coli RM2228]
 gi|304444594|gb|EFM37244.1| peptide chain release factor RF2 [Campylobacter coli JV20]
          Length = 365

 Score =  245 bits (626), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 169/353 (47%), Positives = 229/353 (64%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  +  +   +N   RL  +      P  W +V +A ++ +E+  + N +   +  
Sbjct: 13  LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWNDVKQAGIIGKEKTKITNLLKNYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L +LA  E+D   L+   ++  +++  +   +   LLSGE D  +A + +H
Sbjct: 73  FNALNDASELFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA+ML RMY R+ E+  FK E L+  +GEEAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN     
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSAN--AGE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K+EIGWG QIRSYVL PYQ VKD R+    +   ++LDGD+   ++  L   K
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363


>gi|218132301|ref|ZP_03461105.1| hypothetical protein BACPEC_00159 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992816|gb|EEC58817.1| hypothetical protein BACPEC_00159 [Bacteroides pectinophilus ATCC
           43243]
          Length = 333

 Score =  245 bits (626), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 152/325 (46%), Positives = 223/325 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P  W +  +++  M+E + L ++     E++  + D   L+ +A EE+D S++ E  
Sbjct: 1   MEAPGFWDDADKSQEAMKELKSLKDSFEKYNELKQGMDDIETLIAMADEENDESLVPEVE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +     + + +  +  +LLSGE D ++A L +HAGAGGTE+ DW  ML+RMYTRWAE + 
Sbjct: 61  EEFNVFEKKFDALRIGTLLSGEYDRDNAILTLHAGAGGTEACDWCQMLMRMYTRWAESKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +KTE ++  +G+EAG+K+ T+ I+G NAYG+L+ E G+HRLVRISP+++  +R TSF S 
Sbjct: 121 YKTEVVDYLEGDEAGVKAVTIEIEGENAYGYLRSEHGIHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ +++EI++ D RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQ
Sbjct: 181 DVMPDIEEDVDVEINDDDLRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H+NK +A  ML+AKLY L+ Q+  E  +       ++ +G QIRSYVLQPY MVKD RTN
Sbjct: 241 HQNKDKAMQMLKAKLYLLKKQENAEKTSDIRGDVKDVNFGSQIRSYVLQPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   VLDG++D F+ A L  +
Sbjct: 301 EEVGNAQSVLDGNIDPFITAYLKWQ 325


>gi|88856358|ref|ZP_01131017.1| peptide chain release factor 2 [marine actinobacterium PHSC20C1]
 gi|88814442|gb|EAR24305.1| peptide chain release factor 2 [marine actinobacterium PHSC20C1]
          Length = 368

 Score =  245 bits (626), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 146/353 (41%), Positives = 214/353 (60%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L      +  + D D     ++ L+     P LW +  +A+ +  +  H    ++ I  I
Sbjct: 13  LRSTFADIRQVVDTDRLTSEIARLSEAAGAPDLWDDTDKAQKVTSDLSHRQAELAKINSI 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            +RL D  I+++LA EE D     +    L  IK  +   + ++LL+GE D   A + + 
Sbjct: 73  SNRLDDLEIMVQLANEESDAQAGADARAELTGIKKTLGDLEVQTLLNGEFDQRPAVITIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ D+A MLLRMY R+AE+  + T  L+    EEAGIKSAT  +  P A+G L 
Sbjct: 133 AGAGGVDAADFAEMLLRMYLRYAEQHSYPTRVLDTSYAEEAGIKSATFEVDAPFAFGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVR+SP++S  +R TSF+++ V P+++ +  +E+ E+D R+D +R+SG GGQ 
Sbjct: 193 VEAGTHRLVRMSPFNSAGKRQTSFAAVEVVPLIETTDVVEVPENDIRVDVFRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ E+SQ +N+A A  +L+++L  L+ ++           
Sbjct: 253 VNTTDSAVRITHLPTGIVVSCQNEKSQIQNRAAAMRVLQSRLLLLQREQEAATKKEIAGV 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            T   WG Q+RSYVL PYQMVKDLRT  E  +PS+V DGDLD F+ A +  +K
Sbjct: 313 IT-ASWGDQMRSYVLAPYQMVKDLRTEFEVNNPSNVFDGDLDGFISAGIKWRK 364


>gi|253680935|ref|ZP_04861738.1| peptide chain release factor 2 [Clostridium botulinum D str. 1873]
 gi|253562784|gb|EES92230.1| peptide chain release factor 2 [Clostridium botulinum D str. 1873]
          Length = 327

 Score =  245 bits (626), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 167/326 (51%), Positives = 231/326 (70%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++ + W N+ +A+ + +E + L + I      ++RL D  +L+E+++EEDD S ++E  
Sbjct: 1   MQESNFWDNINKAQEITQEAKGLKDKIEKYYNTKNRLEDLKVLIEISIEEDDESSVEEIL 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + ++ +K+ ++  + + LLSGE D N+A + +HAGAGGT++QDW  MLLRMYTRWAE + 
Sbjct: 61  NEIKEVKVIIDEFKVQILLSGEYDKNNAIVSLHAGAGGTDAQDWTEMLLRMYTRWAEAKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K E L+I  G+EAGIKSA+L I G  AYG+LK E+G+HRLVRISP+++N +R TSF+S+
Sbjct: 121 YKVEILDILPGDEAGIKSASLKIMGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASL 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + +S +IEI   D RIDTYRASGAGGQH+N TDSAVRITHIPTG+VVQ Q ERSQ
Sbjct: 181 EVLPELTESQDIEIKSDDLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQSQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK  A +ML++KL EL+ +  +E          EIGWG QIRSYV QPY MVKD RTN
Sbjct: 241 FQNKDTAMSMLKSKLVELKERAHKEKIEDLSGDLKEIGWGSQIRSYVFQPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355
            E T+   V+DGD+D F+   L + K
Sbjct: 301 TEMTNVDAVMDGDIDIFIVEYLKVNK 326


>gi|118617904|ref|YP_906236.1| peptide chain release factor 2 [Mycobacterium ulcerans Agy99]
 gi|166225111|sp|A0PQZ6|RF2_MYCUA RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|118570014|gb|ABL04765.1| peptide chain release factor 2 PrfB [Mycobacterium ulcerans Agy99]
          Length = 371

 Score =  245 bits (626), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 160/357 (44%), Positives = 222/357 (62%), Gaps = 8/357 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D +    R+  L  +  DP LW +   A+ +  E  H    +  ++E+
Sbjct: 12  LDSALTTVERVLDVEGLRSRIEKLEHEASDPKLWDDQTRAQRVTSELSHTQGELRRVEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQET---SDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + RL D  +L ELA EE+  +  +         + ++ ++E  +  +LLSGE D  +A +
Sbjct: 72  RRRLEDLPVLYELAAEEEGAAAGEALTEADAEFKALRADIEATEVRTLLSGEYDEREALV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG
Sbjct: 132 TIRSGAGGVDAADWAEMLMRMYVRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG G
Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIPTG+VV CQ E+SQ +NK  A  +L+AKL E   +KR E     
Sbjct: 252 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKLLE---RKRIEERAEL 308

Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           ++ K + G  WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F++A +  +
Sbjct: 309 DALKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPATVLDGDIDGFLEAGIRWR 365


>gi|154507630|ref|ZP_02043272.1| hypothetical protein ACTODO_00111 [Actinomyces odontolyticus ATCC
           17982]
 gi|153797264|gb|EDN79684.1| hypothetical protein ACTODO_00111 [Actinomyces odontolyticus ATCC
           17982]
          Length = 373

 Score =  245 bits (626), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 138/355 (38%), Positives = 211/355 (59%), Gaps = 3/355 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   +  +  +   D   +++  LN K   P LW +   A+ +     H  + +  I ++
Sbjct: 12  LRTTMENIIAVVQPDKLREQIVELNEKAAAPDLWDDPSAAQAVTSALSHRQSELDRITQM 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSNDAYLE 120
            +R+ D   ++++A E+ D              K   ++   +  +LL GE D  +A + 
Sbjct: 72  SERIDDLEAMVDMAAEDPDEGADILAEAEADLEKLRKDLGDLEIRTLLDGEYDERNAVIT 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + +GAGG ++ D+A +LLRMY RWAE+  + T+ ++    EEAG+KSAT  ++ P AYG 
Sbjct: 132 IRSGAGGVDAADFAEILLRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVQAPYAYGT 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI ES+ ++D +R+SG GG
Sbjct: 192 LSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIETTDHIEIPESELKVDVFRSSGPGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L  ++ +       
Sbjct: 252 QSVNTTDSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVLRHEEEQAKKKELA 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +  WG Q+RSYVLQPYQMVKDLRT  E  +P  V DGD+D F+ A +  +K
Sbjct: 312 GD-VKASWGDQMRSYVLQPYQMVKDLRTEYESGNPQSVFDGDIDGFINAGIRWRK 365


>gi|260888149|ref|ZP_05899412.1| peptide chain release factor 1 [Selenomonas sputigena ATCC 35185]
 gi|330840016|ref|YP_004414596.1| Peptide chain release factor 1 [Selenomonas sputigena ATCC 35185]
 gi|260862178|gb|EEX76678.1| peptide chain release factor 1 [Selenomonas sputigena ATCC 35185]
 gi|329747780|gb|AEC01137.1| Peptide chain release factor 1 [Selenomonas sputigena ATCC 35185]
          Length = 355

 Score =  245 bits (626), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 109/351 (31%), Positives = 182/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D      ++   L +   DP +  ++ + + L RE   L   +   +E +      L 
Sbjct: 1   MLDKLHAVEEKYRELESLISDPAVLADMPKWQKLSREHAQLAPVVEKYREYKKVREGLLE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
              +  +  D  + +   + +  ++  +E  +       L     D+ +  +E+  G GG
Sbjct: 61  AKAIFDDNPDADMRRLAEEEIAELRPRLEALERELPILLLPKDPNDAKNVIVEIRGGVGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY R+AE+R ++ + ++ +  E  G K     + G  AY +LK E G 
Sbjct: 121 EEAALFAGDLFRMYARYAERRGWRVDVIDKNATEIGGFKEIAFSVDGAGAYSFLKYESGT 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS  ++ V P  ++      + +D RIDTY ASGAGGQ+VN T+
Sbjct: 181 HRVQRVPVTESSGRIHTSAVTVAVLPEAEEVEVEI-APADLRIDTYCASGAGGQYVNRTE 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           +A+RITH+PTG+VVQCQ E+SQ KNK +A  +LRA++  LE  + E+ A +    K+++G
Sbjct: 240 TAIRITHLPTGIVVQCQDEKSQLKNKEKAMRVLRARI--LEAAREEQAATVAADRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +     + VLDGDLD+ + A +   +
Sbjct: 298 SGDRSERIRTYNF-PQGRVTDHRIGLTLHKLAAVLDGDLDELLAALITADQ 347


>gi|187777237|ref|ZP_02993710.1| hypothetical protein CLOSPO_00784 [Clostridium sporogenes ATCC
           15579]
 gi|187774165|gb|EDU37967.1| hypothetical protein CLOSPO_00784 [Clostridium sporogenes ATCC
           15579]
          Length = 325

 Score =  245 bits (626), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 150/323 (46%), Positives = 219/323 (67%), Gaps = 1/323 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++P+ W ++ EA+ +  E ++L + +S    +++ + D + L ++ L E+D  + +E  
Sbjct: 1   MQNPNFWNDIKEAQKITSEEKYLKDKLSKYNHLKNTIEDIIGLSQM-LSEEDDDMGKEIL 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + IK E++  + E+LLSGE D N+A + +H+G GGT++QDW +ML RMYTRWAEK  
Sbjct: 60  SEYKNIKEEIDRFKIETLLSGEYDRNNAIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  + +++ + E+AGIKS TL I G   YG+LKGE+G+HRLVRISP+++N +R TSF+SI
Sbjct: 120 FTVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASI 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + D  EIEI   D +IDTYRA GAGGQHVN T+SAVRITHIPTG++VQCQ ERSQ
Sbjct: 180 EVLPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK  A  +L+++L EL+ +  +E          ++GWG QIRSYV  PY +VKD RT 
Sbjct: 240 HTNKETAMKVLKSRLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E ++   V++GD++ F+   L 
Sbjct: 300 AETSNVDAVMNGDINIFIIEYLK 322


>gi|190151400|ref|YP_001969925.1| peptide chain release factor 1 (RF-1) [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|303250479|ref|ZP_07336676.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|303251821|ref|ZP_07337992.1| Peptide chain release factor 1 (RF-1) [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307249121|ref|ZP_07531128.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307251520|ref|ZP_07533427.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307256019|ref|ZP_07537807.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|307262579|ref|ZP_07544210.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|238692365|sp|B3GZJ0|RF1_ACTP7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189916531|gb|ACE62783.1| Peptide chain release factor 1 (RF-1) [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|302649251|gb|EFL79436.1| Peptide chain release factor 1 (RF-1) [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|302650467|gb|EFL80626.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306854409|gb|EFM86605.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306860984|gb|EFM92990.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306865441|gb|EFM97336.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|306872077|gb|EFN03790.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 360

 Score =  245 bits (626), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 183/344 (53%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     DP +  +  + +   +E   L+  ++     +    D      L
Sbjct: 9   LESLSERHEELQALLGDPSVINDQDKFRAYSKEYSQLEEVVTTFNRWKKLNSDIEEAQIL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   +  E     +     +E   Q   L     D  +A+LE+ AG GG E+  +A
Sbjct: 69  LDDPDMKEMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+ E ++++ E +  ++ E+ G K   + I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPTDLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A  +L +++ ++E +++       ++ +  +G G +   
Sbjct: 249 IPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQ--ADTRRNLLGSGDRSDK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      +V++G +D+ ++  +   +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 349


>gi|301064303|ref|ZP_07204737.1| peptide chain release factor 2 [delta proteobacterium NaphS2]
 gi|300441582|gb|EFK05913.1| peptide chain release factor 2 [delta proteobacterium NaphS2]
          Length = 326

 Score =  245 bits (625), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 158/326 (48%), Positives = 217/326 (66%), Gaps = 1/326 (0%)

Query: 30  TEDPHLWQ-NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
                 WQ +  E   L +ER  L   I   +++  +  D  +L E+ALEE D + L E 
Sbjct: 1   MSKADFWQRDQEEISRLNQERSALSEQIDTWEDLFRKTEDAALLAEMALEEKDKTTLSEV 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           + +++R++ E++  +  SLL    D  +A + ++AGAGGTE+QDW  ML RMYTRWAE +
Sbjct: 61  TRDVERLEREIKRLELRSLLGKPDDRRNAIVAINAGAGGTEAQDWVEMLFRMYTRWAEAK 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
             K E ++   G+EAGIK+    + GP AYG+LK E G+HR+VRISP+D+  RRHTSF+S
Sbjct: 121 GMKVEVIDFLAGDEAGIKNVDFTVTGPYAYGYLKSEHGIHRMVRISPFDATGRRHTSFAS 180

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P VD  I IE+ E+D RIDTYRASG GGQHVN T SA+RITH+PT +VVQCQ E+S
Sbjct: 181 VSVLPEVDLDINIEVDENDLRIDTYRASGPGGQHVNKTSSAIRITHLPTKIVVQCQNEKS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QH+NK  A  +L++KLYELE  K E+       ++ +I WG QIRSYV  PY+MVKD RT
Sbjct: 241 QHRNKDMAMKVLKSKLYELEKNKLEQKKQEIHDTQKDIAWGSQIRSYVFNPYRMVKDHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
           N++  +   V+DGD+D+F+ A L +K
Sbjct: 301 NLDDGNVDKVMDGDIDEFIDAYLRMK 326


>gi|329120961|ref|ZP_08249592.1| peptide chain release factor RF2 [Dialister micraerophilus DSM
           19965]
 gi|327471123|gb|EGF16577.1| peptide chain release factor RF2 [Dialister micraerophilus DSM
           19965]
          Length = 328

 Score =  245 bits (625), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 153/325 (47%), Positives = 215/325 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ + ++     +A     ++ +R      LL++A+EEDD  +  +  
Sbjct: 1   MSDPSFWDDSEKARAISQKATQAKDAYETYTKLFERAESLQELLDMAIEEDDQGMEGDLK 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +   +  K+ E LL+ E D+N+A +  HAGAGGTE+QDW  ML+RMY +WAE   
Sbjct: 61  QEIEELSAILNKKEIELLLNEEYDTNNAIITFHAGAGGTEAQDWTEMLIRMYIKWAESEG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  E L +  G+EAGIKSA  +IKG  AYG LK E+GVHRLVRISP+D+  RRHTSFS++
Sbjct: 121 YGIEELNMLPGDEAGIKSAEYIIKGEFAYGLLKSEKGVHRLVRISPFDAAKRRHTSFSAV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + D IE++++ +D R+D YRASGAGGQHVN T SAVR+TH+PTG+V  CQ ERSQ
Sbjct: 181 DVMPEISDDIEVDLNMNDVRVDYYRASGAGGQHVNKTSSAVRMTHLPTGIVAACQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK Q   +LRAKL+ELE++K E++    +  +  I WG QIRSYV QPY +VKD RT 
Sbjct: 241 TQNKEQCLRILRAKLFELEMKKHEQLKRNIQGEQQAIEWGSQIRSYVFQPYTLVKDNRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E  +   V+DGDL+ F++  L  K
Sbjct: 301 VETGNVQAVMDGDLNPFIEGFLKSK 325


>gi|73748409|ref|YP_307648.1| peptide chain release factor 2 [Dehalococcoides sp. CBDB1]
 gi|73660125|emb|CAI82732.1| peptide chain release factor 2 [Dehalococcoides sp. CBDB1]
          Length = 356

 Score =  245 bits (625), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 147/340 (43%), Positives = 208/340 (61%), Gaps = 2/340 (0%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
           FD       ++ L T + +P  WQ+   A+  M++           + ++ R+ D   L 
Sbjct: 14  FDVSAKELEITELETASSNPDFWQDQQNAQKAMKKLAANKRTSELWRGLERRINDLTELA 73

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
            L    +D S+  E    +  +  E++  +     SG+ D+ +A L VHAGAGG ESQDW
Sbjct: 74  VL--SREDPSLSNEIEHEISGLTAELDSLEVGLAFSGQYDNRNALLTVHAGAGGVESQDW 131

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A MLLRM+ RWAEK+ F  E L+   GEEAGIKSATL I+G  AYG+LK E GVHRL+R+
Sbjct: 132 AGMLLRMFMRWAEKKGFGMEILDQSLGEEAGIKSATLQIEGEYAYGFLKSEHGVHRLIRL 191

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+D++  RHTSF+ + + P  +DS++I+I   D +ID +R+SG GGQ+V    +AVR+T
Sbjct: 192 SPFDADHARHTSFALVEIMPEAEDSVDIDIKPEDIKIDMFRSSGPGGQNVQKVSTAVRVT 251

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           HIP+G+VV  Q ERSQH+N+  A  +L +KL  +E+ KR E     +  +    WG QIR
Sbjct: 252 HIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKLKGERISAEWGSQIR 311

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           SYVL PY+MVKD RT+ E  +   VL+G+LD F+ A L  
Sbjct: 312 SYVLHPYKMVKDHRTDYEVGNAEAVLEGELDGFISAYLRQ 351


>gi|168182216|ref|ZP_02616880.1| peptide chain release factor 2 [Clostridium botulinum Bf]
 gi|237793493|ref|YP_002861045.1| peptide chain release factor 2 [Clostridium botulinum Ba4 str. 657]
 gi|182674541|gb|EDT86502.1| peptide chain release factor 2 [Clostridium botulinum Bf]
 gi|229262967|gb|ACQ54000.1| peptide chain release factor 2 [Clostridium botulinum Ba4 str. 657]
          Length = 325

 Score =  245 bits (625), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 150/323 (46%), Positives = 217/323 (67%), Gaps = 1/323 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++P+ W ++ EA+ +  E ++L + ++    +++ + D + L E+ L E+D  + +E  
Sbjct: 1   MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEM-LSEEDDDMKKEII 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + IK E +  + E+LLSGE D N+  + +H+G GGT++QDW +ML RMYTRWAEK  
Sbjct: 60  SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  + +++ + E+AGIKS TL I G   YG+LKGE+G+HRLVRISP+++N +R TSF+SI
Sbjct: 120 FTVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASI 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + D  EIEI   D +IDTYRA GAGGQHVN T+SAVRITHIPTG++VQCQ ERSQ
Sbjct: 180 EVLPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK  A  +L++KL EL+ +  +E          ++GWG QIRSYV  PY +VKD RT 
Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E ++   V++GD++ F+   L 
Sbjct: 300 AETSNVDSVMNGDINIFITQYLK 322


>gi|283956828|ref|ZP_06374302.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           1336]
 gi|283791689|gb|EFC30484.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           1336]
          Length = 365

 Score =  245 bits (625), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 168/353 (47%), Positives = 229/353 (64%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  +  +   +N   RL  +      P  W +V +A ++ +E+  + N +   +  
Sbjct: 13  LKNKVGNIASIIKPENIKTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L +LA  E+D   L+   ++  +++  +   +   LLSGE D  +A + +H
Sbjct: 73  FNALNDASELFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA++L RMY R+ E+  FK E L+  +GEEAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN     
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANT--GE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K+EIGWG QIRSYVL PYQ VKD R+    +   ++LDGD+   ++  L   K
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363


>gi|95929408|ref|ZP_01312151.1| peptide chain release factor 2 [Desulfuromonas acetoxidans DSM 684]
 gi|95134524|gb|EAT16180.1| peptide chain release factor 2 [Desulfuromonas acetoxidans DSM 684]
          Length = 312

 Score =  245 bits (625), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 159/306 (51%), Positives = 219/306 (71%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           ++ER  L   +         + D  +L+EL  E +D +   E  + L  ++ +V+  +F 
Sbjct: 2   LKERTALQKLVDGWTSAAQTVEDLEVLVELGAESEDEATRDEVRELLPELERQVDKMEFA 61

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            +LSGE DS++A L ++AGAGGTE+QDWA+MLLRMY R+ + + FKT+  +   G++AG+
Sbjct: 62  RMLSGEHDSSNAILSINAGAGGTEAQDWADMLLRMYLRFCDIKGFKTKITDYQPGDDAGV 121

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KS T  ++G  AYGWL+ E G+HRLVRISP+D+ S+RHTSF S++V+P +DDSIE+E+ +
Sbjct: 122 KSVTFTVEGDYAYGWLRPEMGIHRLVRISPFDAASKRHTSFCSVFVFPELDDSIEVELLD 181

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D +IDT+RASGAGGQH+N TDSA+RITHIP+G+VV CQ +RSQH NKA+A   L+A+LY
Sbjct: 182 KDMKIDTFRASGAGGQHINKTDSAIRITHIPSGIVVACQDQRSQHNNKAEAIRQLKARLY 241

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           ELE QK+EE AN     K EIGWG QIRSYVL PY+MVKD RT  E  +   VLDG ++ 
Sbjct: 242 ELERQKKEEEANALSGDKKEIGWGSQIRSYVLHPYRMVKDHRTGFEVGNADSVLDGHIEG 301

Query: 346 FMKATL 351
           F++A L
Sbjct: 302 FIEAYL 307


>gi|288957379|ref|YP_003447720.1| peptide chain release factor RF-2 [Azospirillum sp. B510]
 gi|288909687|dbj|BAI71176.1| peptide chain release factor RF-2 [Azospirillum sp. B510]
          Length = 322

 Score =  245 bits (625), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 191/309 (61%), Positives = 242/309 (78%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRER  LD +++  + ++  L D+L L+E+   E+D +++ +    L  ++      Q E
Sbjct: 1   MRERTQLDTSVAGYRALERDLSDSLELIEMGEMEEDATVVADAEAQLYGLRDRANKLQIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD+ND ++EV+AGAGGTE+QDWA ML+RMYTRWAE+  +KTE L+   GEEAGI
Sbjct: 61  SLLSGEADANDCFVEVNAGAGGTEAQDWALMLMRMYTRWAEQHGYKTEWLDETPGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ IKG NAYGWLK E GVHRLVRISP+DS +RR TSF+++ + PV+DD I+IEI+E
Sbjct: 121 KSATVQIKGHNAYGWLKTEAGVHRLVRISPFDSQARRQTSFAAVSISPVIDDKIDIEINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            DCRIDTYRASGAGGQH+N TDSAVRITHIPT +VV CQQERSQHKN+A+AW+MLRA+LY
Sbjct: 181 KDCRIDTYRASGAGGQHINKTDSAVRITHIPTNIVVSCQQERSQHKNRAKAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+ RE+ A   E++KT+IGWG QIRSYVL PYQMVKDLRT +E +    VLDG LD 
Sbjct: 241 ERELKIREDAAAALEATKTDIGWGHQIRSYVLHPYQMVKDLRTEVETSQSQAVLDGALDP 300

Query: 346 FMKATLAIK 354
           F++A LA +
Sbjct: 301 FLEAALASR 309


>gi|157415680|ref|YP_001482936.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           81116]
 gi|172047182|sp|A8FNC2|RF2_CAMJ8 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|157386644|gb|ABV52959.1| peptide chain release factor RF-2 [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|307748321|gb|ADN91591.1| Peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           M1]
 gi|315930963|gb|EFV09938.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           327]
          Length = 365

 Score =  245 bits (625), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 168/353 (47%), Positives = 229/353 (64%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  +  +   +N   RL  +      P  W +V +A ++ +E+  + N +   +  
Sbjct: 13  LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L +LA  E+D   L+   ++  +++  +   +   LLSGE D  +A + +H
Sbjct: 73  FNALNDASELFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA++L RMY R+ E+  FK E L+  +GEEAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN     
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSAN--AGE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K+EIGWG QIRSYVL PYQ VKD R+    +   ++LDGD+   ++  L   K
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363


>gi|104773716|ref|YP_618696.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116513713|ref|YP_812619.1| protein chain release factor B [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|103422797|emb|CAI97438.1| Peptide chain release factor 2 (RF-2) [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
 gi|116093028|gb|ABJ58181.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
 gi|325125366|gb|ADY84696.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 332

 Score =  245 bits (624), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 157/325 (48%), Positives = 202/325 (62%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N  +A+ L+ E   L         ++  L D    LEL   E D  + ++T 
Sbjct: 1   MAEPGFWDNQEKAQKLISETNLLKEKRDSFLALKKDLTDEETALELLRLEADADLQKDTE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           D L +++ E    +   LLSGE D ++A +E+H GAGGTE+ DW NMLLRMY R+ + R 
Sbjct: 61  DQLAKLQEEFHQYELNLLLSGEYDDHNALMEIHPGAGGTEAMDWGNMLLRMYQRYCDSRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
            K E      G+EAG+KS ++ I G NAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 LKFEVNNFEPGDEAGLKSVSVRISGKNAYGLLKSEHGVHRLVRISPFDSAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P VDDSIEI+I   D RID YR+SGAGGQH+N T SAVRITHIPTG+V   Q +RSQ
Sbjct: 181 EVIPEVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHIPTGIVTTSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A N +RAKL+ LE +K+ +     +  + +I WG QIRSYV  PY MVKD RT 
Sbjct: 241 FQNRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQLDIAWGSQIRSYVFHPYSMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DG LD F+ A L  +
Sbjct: 301 YETADVGGVMDGKLDPFIYAYLQWR 325


>gi|197123211|ref|YP_002135162.1| LigA [Anaeromyxobacter sp. K]
 gi|196173060|gb|ACG74033.1| LigA [Anaeromyxobacter sp. K]
          Length = 372

 Score =  245 bits (624), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 169/351 (48%), Positives = 238/351 (67%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +LSR+L  L G  D +    R++ ++  +EDP  W + ++A+ L++E+  L+        
Sbjct: 11  ELSRRLEALRGSLDVERKELRVAEISKLSEDPAFWTDNVKAQALLKEKAQLEQVTQACAA 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D   L ELA E  D +   E ++  + +  ++E  + + +LSG  D+  A +EV
Sbjct: 71  VRRALDDAQALSELAEEARDDATRAEAAEAAEAVGRQLEGLELQKMLSGPHDAAGAIVEV 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG E+ DWA ML RMY R+ E+R ++ E  ++  GEEAGI SA+ +++G + YGWL
Sbjct: 131 KSGAGGVEAMDWAAMLYRMYVRYCERRGWEVEPADLVAGEEAGISSASFIVRGDHPYGWL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+D N+RR TSF+++ V P ++D I I+I E+D RIDTYR+SGAGGQ
Sbjct: 191 KAEKGVHRLVRISPFDQNARRQTSFAAVDVTPEIEDDIVIDIKEADVRIDTYRSSGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VN TDSAVR+TH+PTG+VV  Q ERSQ KN++ AW +LRAKLY+LE +KR    +  E+
Sbjct: 251 KVNKTDSAVRMTHLPTGIVVAVQNERSQQKNRSVAWKILRAKLYDLEEKKRAAARDAAEA 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            K +I +G QIRSYVLQPYQMVKDLRT +E     DVLDGDLD F++  L 
Sbjct: 311 LKKDIDFGSQIRSYVLQPYQMVKDLRTGVETGKVDDVLDGDLDPFIQPYLM 361


>gi|322513486|ref|ZP_08066596.1| peptide chain release factor RF1 [Actinobacillus ureae ATCC 25976]
 gi|322120705|gb|EFX92589.1| peptide chain release factor RF1 [Actinobacillus ureae ATCC 25976]
          Length = 360

 Score =  245 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 112/344 (32%), Positives = 184/344 (53%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     DP +  +  + +   +E   L+  ++     +    D      L
Sbjct: 9   LESLSERHEELQALLGDPSVINDQDKFRAYSKEYSQLEEVVTTFNRWKKLNNDIEEAQIL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   +  E     +     +E   Q   L     D  +A+LE+ AG GG E+  +A
Sbjct: 69  LDDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+ E ++++ E +  ++ E+ G K   + I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A ++L +++ ++E +++       ++ +  +G G +   
Sbjct: 249 IPTGIVVECQDERSQHKNKAKALSVLASRIVQVEQERQAAEQ--ADTRRNLLGSGDRSDK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+      +V++G +D+ ++  +   +
Sbjct: 307 IRTYNY-PQGRITDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 349


>gi|153932889|ref|YP_001382578.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC
           19397]
 gi|153936079|ref|YP_001386131.1| peptide chain release factor 2 [Clostridium botulinum A str. Hall]
 gi|152928933|gb|ABS34433.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC
           19397]
 gi|152931993|gb|ABS37492.1| peptide chain release factor 2 [Clostridium botulinum A str. Hall]
          Length = 325

 Score =  245 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 148/323 (45%), Positives = 216/323 (66%), Gaps = 1/323 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++P+ W ++ EA+ +  E ++L + ++    +++ + D + L E+ L E+D  + +E  
Sbjct: 1   MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEM-LSEEDDDMKKEII 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + IK E +  + E+LLSGE D N+  + +H+G GGT++QDW +ML RMYTRWAEK  
Sbjct: 60  SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  + +++ + E+AGIKS TL I G   YG+LK E+G+HRLVRISP+++N +R TSF+SI
Sbjct: 120 FAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASI 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + D  EIEI   D +IDTYRA GAGGQHVN T+SAVRITH+PTG++VQCQ ERSQ
Sbjct: 180 EVLPELTDDQEIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK  A  +L++KL EL+ +  +E          ++GWG QIRSYV  PY +VKD RT 
Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E ++   V++GD++ F+   L 
Sbjct: 300 AETSNVDSVMNGDINIFITQYLK 322


>gi|15827278|ref|NP_301541.1| peptide chain release factor 2 [Mycobacterium leprae TN]
 gi|221229756|ref|YP_002503172.1| peptide chain release factor 2 [Mycobacterium leprae Br4923]
 gi|6093957|sp|O32885|RF2_MYCLE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|254790917|sp|B8ZUV0|RF2_MYCLB RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|2326693|emb|CAB11005.1| peptide chain release factor 2 [Mycobacterium leprae]
 gi|13092827|emb|CAC30176.1| putative peptide chain release factor 2 [Mycobacterium leprae]
 gi|219932863|emb|CAR70761.1| putative peptide chain release factor 2 [Mycobacterium leprae
           Br4923]
          Length = 374

 Score =  245 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 156/358 (43%), Positives = 218/358 (60%), Gaps = 7/358 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D +    R+  L  +  DP LW + + A+ +  E  H    +  I+E+
Sbjct: 12  LDSTLTTVERVLDVEGLRTRIEKLEHEASDPKLWDDQVRAQRVTSELSHAQGELRRIEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSD------NLQRIKLEVEYKQFESLLSGEADSND 116
           + RL D  +L ELA EE   +              L+ +++++E  +  +LLSGE D  +
Sbjct: 72  RRRLDDLPVLYELAAEERAAAAASGMEAFAEADAELKALRVDIEATEVRTLLSGEYDERE 131

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
           A + + +GAGG ++ DWA ML+RMY RWAE+ K+  E L+    EEAG+KSAT  +  P 
Sbjct: 132 ALITIRSGAGGVDAADWAEMLMRMYIRWAEQHKYGVEVLDTSYAEEAGVKSATFAVHAPF 191

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           AYG L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+S
Sbjct: 192 AYGTLASEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVEITDHIDIPEGDVRVDVYRSS 251

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ VNTTDSAVR+TH+PTG+VV CQ E+SQ +NK  A  +L+AKL E +  +     
Sbjct: 252 GPGGQSVNTTDSAVRLTHVPTGLVVTCQNEKSQLQNKVSAMRVLQAKLLERKRLEERAEL 311

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +  +       WG QIRSYVL PYQMVKDLR   E  +P+ VLDGD+D F++A +  +
Sbjct: 312 DALKGRGGS-SWGNQIRSYVLHPYQMVKDLRNEYEVGNPTAVLDGDIDGFLEAGIRWR 368


>gi|306823395|ref|ZP_07456770.1| peptide chain release factor RF2 [Bifidobacterium dentium ATCC
           27679]
 gi|309802644|ref|ZP_07696748.1| peptide chain release factor 2 [Bifidobacterium dentium JCVIHMP022]
 gi|304553102|gb|EFM41014.1| peptide chain release factor RF2 [Bifidobacterium dentium ATCC
           27679]
 gi|308220708|gb|EFO77016.1| peptide chain release factor 2 [Bifidobacterium dentium JCVIHMP022]
          Length = 380

 Score =  245 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 138/353 (39%), Positives = 211/353 (59%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   +   +    D D    +   L  +  +P LW +   A+ +  +   + + +  +  
Sbjct: 16  EARAKYESISKALDVDRLTVQAKELEVQATEPGLWDDPENAQKITSKLSAVQSQLKRLAS 75

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              R+ D   L+EL  EE+D   L+E  + ++ I+ +++  + ++LL GE D   A + +
Sbjct: 76  ASQRIDDVETLVELGREEEDADTLEEAKNEIEGIRHDLDDMEIQTLLDGEYDERSAVVTI 135

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY RWAE+  +K + ++    EEAGIKSAT  +  P AYG +
Sbjct: 136 RSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRM 195

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+V+ +  I++ +S+ R+DTY +SG GGQ
Sbjct: 196 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRVDTYCSSGPGGQ 255

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVRITHIPTG+VV  Q ERSQ +N+A A  +L+++L  L  ++  +       
Sbjct: 256 GVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHEEEAKKKKELAG 315

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD+D F++A +  +
Sbjct: 316 D-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAGIRWR 367


>gi|260663162|ref|ZP_05864054.1| peptide chain release factor 2 [Lactobacillus fermentum 28-3-CHN]
 gi|260552354|gb|EEX25405.1| peptide chain release factor 2 [Lactobacillus fermentum 28-3-CHN]
          Length = 332

 Score =  245 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 161/324 (49%), Positives = 207/324 (63%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +   A+  +     L         +QD++ +  +  E+   E D  +  E  
Sbjct: 1   MTAPDFWDDNQRAQEKVAALNELKKRRDNFLTLQDQVEELALTAEMLQAEPDPELKAELD 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +N   ++  +   + E LL G  D +DA LE+H GAGGTE+QDW  MLLRMY RWA +  
Sbjct: 61  NNFPGVQEHLRAYRLEQLLDGPYDQSDAILEIHPGAGGTEAQDWGEMLLRMYMRWANQHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E      GEEAGIKS TLLIKG NAYG+L  E+GVHRLVRISP+DS +RRHTSF+S+
Sbjct: 121 FAVETANYEAGEEAGIKSVTLLIKGHNAYGYLHPEKGVHRLVRISPFDSAARRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P++D+SIE+EI  SD R+DT+RASGAGGQH+N T+SAVRITH+PTG+V   Q ERSQ
Sbjct: 181 DVMPILDESIEVEIDPSDLRVDTFRASGAGGQHINKTESAVRITHLPTGIVTSSQAERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A NML++KLYELE +K+ +     E  + EIGWG QIRSYV  PY +VKD RT 
Sbjct: 241 LQNRITAMNMLKSKLYELEEEKKAKERAQIEGEQREIGWGSQIRSYVFHPYTLVKDARTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E      V+DGDLD F+ A L  
Sbjct: 301 YETHDVIGVMDGDLDPFINAYLQW 324


>gi|300813058|ref|ZP_07093436.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|313123317|ref|YP_004033576.1| bacterial peptide chain release factor 2 (brf-2) [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|300495899|gb|EFK31043.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|312279880|gb|ADQ60599.1| Bacterial peptide chain release factor 2 (BRF-2) [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
          Length = 332

 Score =  245 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 157/325 (48%), Positives = 202/325 (62%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N  +A+ L+ E   L         ++  L D    LEL   E D  + ++T 
Sbjct: 1   MAEPGFWDNQEKAQKLISETNLLKEKRDSFLALEKDLTDEETALELLRLEADADLQKDTE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           D L +++ E    +   LLSGE D ++A +E+H GAGGTE+ DW NMLLRMY R+ + R 
Sbjct: 61  DQLAKLQEEFHQYELNLLLSGEYDDHNALMEIHPGAGGTEAMDWGNMLLRMYQRYCDSRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
            K E      G+EAG+KS ++ I G NAYG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 LKFEVNNFEPGDEAGLKSVSVRISGKNAYGLLKSEHGVHRLVRISPFDSAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P VDDSIEI+I   D RID YR+SGAGGQH+N T SAVRITHIPTG+V   Q +RSQ
Sbjct: 181 EVIPEVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHIPTGIVTTSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A N +RAKL+ LE +K+ +     +  + +I WG QIRSYV  PY MVKD RT 
Sbjct: 241 FQNRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQLDIAWGSQIRSYVFHPYSMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DG LD F+ A L  +
Sbjct: 301 YETADVGGVMDGKLDPFIYAYLQWR 325


>gi|111220808|ref|YP_711602.1| peptide chain release factor 2 [Frankia alni ACN14a]
 gi|111148340|emb|CAJ60012.1| peptide chain release factor RF-2 [Frankia alni ACN14a]
          Length = 369

 Score =  245 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 147/354 (41%), Positives = 213/354 (60%), Gaps = 4/354 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L+ +  + D +   +R   L  +  DP LW +   A+++ R        IS ++ 
Sbjct: 14  QLDATLSGIESVLDVEGLRRRAEELERQAADPDLWSDQDRAQVVTRRLSSTRGDISRVEG 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ RL D     +L  ++       +          ++   +  +LLSGE D  DA +++
Sbjct: 74  LRRRLDDIAAAADLGDDDLLAEAAADLPALNG----DISALEVRTLLSGEFDERDAIVQL 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG ++ DW  MLLRMY RWAE+  + TE  +  + EEAG+KSAT  +K P AYG L
Sbjct: 130 SAGAGGVDAADWTAMLLRMYLRWAERHGYPTEVFDTSEAEEAGLKSATFQVKAPYAYGTL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVRISP+D+ +RR TSF+ + V PVV+ S  ++I + D RID +R+SG GGQ
Sbjct: 190 RSEHGVHRLVRISPFDNQNRRQTSFAGVEVTPVVELSDHVDIDDKDLRIDIFRSSGPGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PT +VV CQ ERSQ +NKA A  +L+AKL E    +          
Sbjct: 250 GVNTTDSAVRITHLPTNIVVTCQNERSQLQNKAAAMIVLQAKLLERRRAEEAAAKQRITG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              ++ +G QIR+YVL PYQ+VKDLRT+ E ++   VLDG+LD+F+ A +  ++
Sbjct: 310 GPQDVSFGSQIRNYVLHPYQLVKDLRTDTETSNTGGVLDGELDNFIDAEIRWRR 363


>gi|325684476|gb|EGD26640.1| peptide chain release factor RF2 [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 332

 Score =  245 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 156/325 (48%), Positives = 201/325 (61%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N  +A+ L+ E   L         ++  L D    LEL   E D  + ++T 
Sbjct: 1   MAEPGFWDNQEKAQKLISETNLLKEKRDSFLALEKDLTDEETALELLRLEADADLQKDTE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           D L +++ E    +   LLSGE D ++A +E+H GAGGTE+ DW NMLLRMY R+ + R 
Sbjct: 61  DQLAKLQEEFHQYELNLLLSGEYDDHNALMEIHPGAGGTEAMDWGNMLLRMYQRYCDSRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
            K E      G+EAG+KS ++ I G N YG LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 LKFEVNNFEPGDEAGLKSVSVRISGKNTYGLLKSEHGVHRLVRISPFDSAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P VDDSIEI+I   D RID YR+SGAGGQH+N T SAVRITHIPTG+V   Q +RSQ
Sbjct: 181 EVIPEVDDSIEIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHIPTGIVTTSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A N +RAKL+ LE +K+ +     +  + +I WG QIRSYV  PY MVKD RT 
Sbjct: 241 FQNRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQLDIAWGSQIRSYVFHPYSMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E      V+DG LD F+ A L  +
Sbjct: 301 YETADVGGVMDGKLDPFIYAYLQWR 325


>gi|242041179|ref|XP_002467984.1| hypothetical protein SORBIDRAFT_01g037550 [Sorghum bicolor]
 gi|241921838|gb|EER94982.1| hypothetical protein SORBIDRAFT_01g037550 [Sorghum bicolor]
          Length = 467

 Score =  245 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 152/351 (43%), Positives = 222/351 (63%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +++ +  +     W   ++R   L    E P LW++ + A  + RE+  L   I  + + 
Sbjct: 107 VAQSVKLIKKRLKWGWILERTKQLAVVLERPDLWEDPVFAGRVSREQGELMGKIKSVNQF 166

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L +++ +L LA EE+D  +  E+   L  ++   + K+  +LLSG+ DS   ++EV 
Sbjct: 167 EQELIEHIEMLRLAREENDNELEMESMRALADMRRSAKEKELNALLSGDNDSCPCFIEVQ 226

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA M++ MY  WA++R +    +E   GE AGIK AT+ + G  A+G+ K
Sbjct: 227 AGAGGTESMDWAAMVMNMYRSWAQRRGYTVTVVEEMPGEVAGIKRATIKVDGEYAFGYAK 286

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+DS  RRHTSF+++ V P+  D +   +I +SD RI+ +R+ G GGQ
Sbjct: 287 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDAASRYQIKDSDLRIERFRSGGPGGQ 346

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H NTT+SA+RI HIPTG+   CQ ERSQH NKA A  +L+++L +LE+ ++ ++      
Sbjct: 347 HANTTESAIRIVHIPTGISATCQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNAEHTQ 406

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           S  EI WG QIRSYVL PY+MVKDLRTN E + P  VL+GD+DDF+   L+
Sbjct: 407 SLNEISWGNQIRSYVLHPYRMVKDLRTNYEVSDPDSVLEGDIDDFILNYLS 457


>gi|29839933|ref|NP_829039.1| peptide chain release factor 2 [Chlamydophila caviae GPIC]
 gi|29834280|gb|AAP04917.1| peptide chain release factor 2 [Chlamydophila caviae GPIC]
          Length = 337

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 155/329 (47%), Positives = 211/329 (64%), Gaps = 1/329 (0%)

Query: 25  FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84
            L  +T     WQ+V  A  +      L   IS  +E + ++ +    L  +    D  +
Sbjct: 3   ELEDQTLKEDFWQDVAHAGKVSERVASLKRQISDYEEFKSKVDNLTFFLNDSEASSDPEL 62

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
            ++        +  +   + + LLSGE D N  +L ++AGAGGTES DW  ML RMY+RW
Sbjct: 63  REDLEKEFSVCETILAEWETQRLLSGEVDKNPCFLTINAGAGGTESCDWVEMLFRMYSRW 122

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           A   ++K E ++  +G+ AGIK  T+   G  AYG+ K E+GVHRLVRISP+DSN++RHT
Sbjct: 123 ASHHQWKAEVIDRQEGDVAGIKHITVKFSGEYAYGYAKAERGVHRLVRISPFDSNAKRHT 182

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           SF+S+ VYP +DD IEI+I  +D RIDTYR+SGAGGQHVN TDSAVRITHIPTG++V CQ
Sbjct: 183 SFASVDVYPEIDDEIEIDIRPNDLRIDTYRSSGAGGQHVNVTDSAVRITHIPTGIIVSCQ 242

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
            ERSQ +N+     MLRA++Y+  LQ+R E   +   +K EI WG QIR+YV QPY +VK
Sbjct: 243 SERSQIQNRESCMKMLRARMYQQVLQERLEKQLLDRKNKKEIAWGSQIRNYVFQPYTLVK 302

Query: 325 DLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
           D+RT  E  +   ++DG+ LDDF+KA LA
Sbjct: 303 DMRTGHETGNVQAMMDGELLDDFVKAYLA 331


>gi|313672261|ref|YP_004050372.1| bacterial peptide chain release factor 1 (brf-1) [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939017|gb|ADR18209.1| bacterial peptide chain release factor 1 (bRF-1) [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 356

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 124/351 (35%), Positives = 194/351 (55%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +  +++ + L  K  DP++  ++   + L +E   L   +    E +D       
Sbjct: 1   MFDHLEEVLEKYNELTEKLADPNVMSDIKVYQQLSKEHSDLKPIVEKYLEYKDVQRSIKE 60

Query: 72  LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +  +  D  +++          ++++   E  +   L     D  + Y+E+ AG GG
Sbjct: 61  AEAILKDGGDKDLIELAEIELAEGKEKLEKISEELKILLLPKDPFDEKNIYIEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            ES  +A  LLRMY R+AEK  +KTE ++ ++    G K   LL+KG NAY  LK E G 
Sbjct: 121 EESALFAADLLRMYIRYAEKCGWKTEIIDANETGMGGYKEVILLVKGKNAYSKLKYEAGG 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S+ R HTS  ++ V P   D +++ I   D RID YR+SGAGGQHVNTTD
Sbjct: 181 HRVQRIPETESSGRIHTSACTVAVIP-EADDVDVHIDPKDLRIDVYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG+VV CQ ERSQ KNK +A  +L++K++E+EL+++       E+ K ++G
Sbjct: 240 SAVRITHIPTGIVVSCQDERSQIKNKEKAMKLLKSKIFEMELERQRTEQ--AENRKQQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   + D R N+   +   V++G+LD+ + A +   +
Sbjct: 298 SGDRSERIRTYNF-PQNRLTDHRINLTVYNLDMVMEGELDEIIDALITYDQ 347


>gi|187930213|ref|YP_001900700.1| peptide chain release factor 1 [Ralstonia pickettii 12J]
 gi|238691828|sp|B2UDM7|RF1_RALPJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|187727103|gb|ACD28268.1| peptide chain release factor 1 [Ralstonia pickettii 12J]
          Length = 360

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 183/344 (53%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R+  +N          N+ + + L RE   L+  ++     +    D     EL
Sbjct: 9   LDQLAERIVEINALLAREDATANLDQYRKLTREHAELEPVVAQFAAWKQAEEDIATAQEL 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           A + D  +  ++      +R++      Q   L     D  + ++E+ AG GG ES  +A
Sbjct: 69  AADPDMKAFAEDELRAARERMESLEGELQRLLLPKDPNDHRNIFVEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+++++ E +     +  G K     + G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYTRYAERQRWQVEIVSESPSDLGGYKEVIARLVGEGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D   +I+I+ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A+L +   Q+RE  A    + K+ IG G    +
Sbjct: 249 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKD--RQEREAQAKEASARKSLIGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       ++DGD+D+ + A  A  +
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKIDAIMDGDIDELVGALAAEHQ 349


>gi|299782886|gb|ADJ40884.1| Peptide chain release factor RF2 [Lactobacillus fermentum CECT
           5716]
          Length = 332

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 162/324 (50%), Positives = 207/324 (63%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +   A+  +     L         +QD++ +  +  E+   E D  +  E  
Sbjct: 1   MTAPDFWDDNQRAQEKVAALNELKKRRDNFLTLQDQVEELALTAEMLQAEPDPELKAELD 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           DN   ++  +   + E LL G  D +DA LE+H GAGGTE+QDW  MLLRMY RWA +  
Sbjct: 61  DNFPGVQEHLRAYRLEQLLDGPYDQSDAILEIHPGAGGTEAQDWGEMLLRMYMRWANQHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E      GEEAGIKS TLLIKG NAYG+L  E+GVHRLVRISP+DS +RRHTSF+S+
Sbjct: 121 FAVETANYEAGEEAGIKSVTLLIKGHNAYGYLHPEKGVHRLVRISPFDSAARRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P++D+SIE+EI  SD R+DT+RASGAGGQH+N T+SAVRITH+PTG+V   Q ERSQ
Sbjct: 181 DVMPILDESIEVEIDPSDLRVDTFRASGAGGQHINKTESAVRITHLPTGIVTSSQAERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A NML++KLYELE +K+ +     E  + EIGWG QIRSYV  PY +VKD RT 
Sbjct: 241 LQNRITAMNMLKSKLYELEEEKKAKERAQIEGEQREIGWGSQIRSYVFHPYTLVKDARTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E      V+DGDLD F+ A L  
Sbjct: 301 YETHDVIGVMDGDLDPFINAYLQW 324


>gi|283955061|ref|ZP_06372564.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           414]
 gi|283793428|gb|EFC32194.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           414]
          Length = 366

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 169/353 (47%), Positives = 231/353 (65%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  +  +   +N   RL  +      P  W +V +A ++ +E+  + N +   +  
Sbjct: 13  LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGVIGKEKTKITNLLKNYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L +LA  E+D   L+   +++ +++  +   +   LLSGE DS +A + +H
Sbjct: 73  FNALNDASELFDLANSENDTETLEALFNDVPKLEDTITSLEISMLLSGENDSKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA++L RMY R+ E+  FK E L+  +GEEAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN     
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELLKQQDNAN--AGE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K+EIGWG QIRSYVL PYQ VKD R+    +   ++LDGD+   ++  L   K
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363


>gi|154175392|ref|YP_001408592.1| peptide chain release factor 2 [Campylobacter curvus 525.92]
 gi|112803979|gb|EAU01323.1| peptide chain release factor 2 [Campylobacter curvus 525.92]
          Length = 372

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 168/354 (47%), Positives = 234/354 (66%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ ++  +G +    +  +RL  +     +P  WQ++ +A  L +E+  + N ++    
Sbjct: 16  RLNTKVENIGSIIKPQSIKERLQEIERLEHEPDFWQDIAKAGALNKEKTKISNMLAKFTN 75

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            +  + D   L ELA  E D   L    D+   ++ ++   +   LLSGE D+ +A + +
Sbjct: 76  AKAAVDDAKELYELANSESDEETLNSLFDDATELENKITALEISMLLSGEDDNKNAIISI 135

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTES DWA+ML RMY R+ E+  FK E L+  +G+EAG+K  + ++KG NAYG+L
Sbjct: 136 HPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGDEAGLKDVSFIVKGENAYGYL 195

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D +IDTYRASGAGGQ
Sbjct: 196 KAENGIHRLVRTSPFDSAGRRHTSFSSVMVSPEIDDDIEIEIEEKDLKIDTYRASGAGGQ 255

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SA+RITH+PTG+VVQCQ +RSQHKN+A A  ML+++LYELEL K++E +N  E 
Sbjct: 256 HVNKTESAIRITHMPTGIVVQCQNDRSQHKNRATAMKMLKSRLYELELMKQQEASNSVE- 314

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            K+EIGWG QIRSYVL PYQ VKD R+    +    +LDGD+   ++  L  +K
Sbjct: 315 -KSEIGWGHQIRSYVLFPYQQVKDNRSGQAFSQTDAILDGDIKKMIEGVLISQK 367


>gi|86149455|ref|ZP_01067686.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|86151896|ref|ZP_01070109.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|88596537|ref|ZP_01099774.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|148925627|ref|ZP_01809315.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|205356111|ref|ZP_03222878.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|218563058|ref|YP_002344837.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|315124892|ref|YP_004066896.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|24638160|sp|Q9PMK5|RF2_CAMJE RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|85840237|gb|EAQ57495.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|85841004|gb|EAQ58253.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|88191378|gb|EAQ95350.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|112360764|emb|CAL35563.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|145845637|gb|EDK22728.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|205345954|gb|EDZ32590.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|284926663|gb|ADC29015.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315018614|gb|ADT66707.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315927400|gb|EFV06738.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           DFVF1099]
 gi|315930833|gb|EFV09825.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           305]
          Length = 365

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 168/353 (47%), Positives = 229/353 (64%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  +  +   +N   RL  +      P  W +V +A ++ +E+  + N +   +  
Sbjct: 13  LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L +LA  E+D   L+   ++  +++  +   +   LLSGE D  +A + +H
Sbjct: 73  FNALNDASELFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA++L RMY R+ E+  FK E L+  +GEEAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN     
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANT--GE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K+EIGWG QIRSYVL PYQ VKD R+    +   ++LDGD+   ++  L   K
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363


>gi|325916711|ref|ZP_08178968.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325537060|gb|EGD08799.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 329

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 170/318 (53%), Positives = 224/318 (70%), Gaps = 1/318 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W +   A+ L RER  L+  +  I ++   L D   LL+LA  E D         +L + 
Sbjct: 2   WNDAERAQALGRERSMLEKTVIGIADVLAGLTDAGELLDLADSEQDEDTAVAVIADLDKY 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           +  VE  +F+ + SG+ D  +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE +
Sbjct: 62  QAHVEKLEFQRMFSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTELM 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E+  GE AGIKSAT+ I+G  AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P V
Sbjct: 122 EVSGGEVAGIKSATIRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEV 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT  VV CQ  RSQH+N+  
Sbjct: 182 DDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRDN 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A  ML AKLYELE+QKR    +  E++K++IGWG QIR+YVL     +KDLRT IE++  
Sbjct: 242 AMKMLAAKLYELEVQKRNVERDALEATKSDIGWGSQIRNYVLD-QSRIKDLRTGIERSDT 300

Query: 336 SDVLDGDLDDFMKATLAI 353
             VLDGDLD+F++A+L  
Sbjct: 301 QKVLDGDLDEFVEASLKA 318


>gi|305679674|ref|ZP_07402484.1| peptide chain release factor 2 [Corynebacterium matruchotii ATCC
           14266]
 gi|305660294|gb|EFM49791.1| peptide chain release factor 2 [Corynebacterium matruchotii ATCC
           14266]
          Length = 368

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 218/353 (61%), Gaps = 3/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + +  +   R   L  K  DP LW +   A+ +  E   +   +  ++ +
Sbjct: 12  LDTTLTSIEKVMNPADLSDRARELAAKAADPSLWDDPEHAQQVTSELSQVQVQLKRLQSL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  I+ EL   E++        + L  ++ +++  +  ++LSGE DS +A + + 
Sbjct: 72  RSRLTDLPIMYEL--AEEEGEGTDIADEELTDLRADIDALEVTTMLSGEYDSREALINIR 129

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ DWA ML+RMY RWAEK+  K E  +I   EEAGIKSAT ++ G   YG L 
Sbjct: 130 SGAGGVDAADWAEMLMRMYIRWAEKQGRKVEVYDISYAEEAGIKSATFIVHGEYMYGTLS 189

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQGVHRLVRISP+D+ +RR TSF+ + V PVV+ +  I+I +S+ R+D YR+SG GGQ 
Sbjct: 190 VEQGVHRLVRISPFDNQARRQTSFAEVEVLPVVEITDHIDIPDSELRVDVYRSSGPGGQS 249

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E + Q+     +   + 
Sbjct: 250 VNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASALRVLQAKLLERKRQEERAELDALGAG 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+R+YVL P+QMVKDLRT  E   P  VLDGDLD F++A +  +K
Sbjct: 310 -GNASWGNQMRNYVLHPFQMVKDLRTGFEVGDPQKVLDGDLDKFLEAGIRWRK 361


>gi|283457761|ref|YP_003362349.1| protein chain release factor B [Rothia mucilaginosa DY-18]
 gi|283133764|dbj|BAI64529.1| protein chain release factor B [Rothia mucilaginosa DY-18]
          Length = 421

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 137/356 (38%), Positives = 216/356 (60%), Gaps = 4/356 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L      +  + D +   + +  L+ +   P LW +V  A+ +     +  + ++ ++ 
Sbjct: 58  ELRAIFTSIAAVSDIEGIERAIEDLSAQAAAPDLWDDVENAQKVTSALSYKQSELNRLRS 117

Query: 62  IQDRLCDNLILLELALEEDDCSILQ---ETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           +  R+ D  +++ELA  ED+ +  +   +       I+ ++E  +   LLSGE D  +A 
Sbjct: 118 LSSRIDDVEVMVELAEAEDEETAAELLADAERECAEIRAKLEELEVLVLLSGEYDQREAV 177

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ D+A MLLRMY RWAEK  + T+ L+    EEAG+KS T  +  P A+
Sbjct: 178 VTIRSGAGGVDAADFAEMLLRMYLRWAEKNGYPTKVLDTSYAEEAGLKSVTFEVNAPYAF 237

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI ES+ ++D +R+SG 
Sbjct: 238 GRLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDAIEIPESEIKVDVFRSSGP 297

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVR+TH+PTG+VV  Q E+SQ +N+A A  +L+++L  L  ++ +     
Sbjct: 298 GGQSVNTTDSAVRMTHLPTGIVVSMQNEKSQLQNRAAALRVLQSRLLLLRKEQEDAKKKE 357

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                 +  WG Q+RSYVL PYQMVKDLRT  E+ + S+VLDG L+ F+ A +  +
Sbjct: 358 LAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYEEGNTSNVLDGGLNAFIDAGIRWR 412


>gi|87300848|ref|ZP_01083690.1| peptide chain release factor 2 [Synechococcus sp. WH 5701]
 gi|87284719|gb|EAQ76671.1| peptide chain release factor 2 [Synechococcus sp. WH 5701]
          Length = 355

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 144/343 (41%), Positives = 207/343 (60%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
             +FD      R   L      P  W +  +A+  MR+   +   +  +++ +  + D  
Sbjct: 3   RTVFDVPALNARQQDLEQLASQPDFWDDQQQAQKQMRQLDEVKAQLEQLQQWRTAVDDAR 62

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             LEL   E D  +L E +  LQ +K  ++  + E LLSG  D   A + ++AGAGGT++
Sbjct: 63  ATLELYDLEPDEELLSEANGGLQSLKAALDRWELERLLSGPYDKEGAVISINAGAGGTDA 122

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA ML+RMYTRWAE    K    E+ +GEEAGIKS T+ I G  AYG+L+ E+G HRL
Sbjct: 123 QDWALMLMRMYTRWAEDHGMKVSVDELSEGEEAGIKSCTIEIDGRYAYGYLRNEKGTHRL 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+++N +R TSF+ + V P +++ ++++I + D  + T R+ GAGGQ+VN  ++AV
Sbjct: 183 VRISPFNANDKRQTSFAGVEVMPKLEEDVKLDIPDKDLEVTTSRSGGAGGQNVNKVETAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI H+PTG+ V+C QERSQ +NK +A  +L AKL  +  ++R            E  WG 
Sbjct: 243 RILHVPTGLAVRCTQERSQLQNKEKAMALLMAKLLVIAQEQRASEIADIRGDIVEAAWGN 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           QIR+YV  PYQMVKDLRT +E T    V+DGDLD F++A L  
Sbjct: 303 QIRNYVFHPYQMVKDLRTAVETTDVQGVMDGDLDPFIQALLRQ 345


>gi|330444184|ref|YP_004377170.1| peptide chain release factor 2 [Chlamydophila pecorum E58]
 gi|328807294|gb|AEB41467.1| Peptide chain release factor 2 [Chlamydophila pecorum E58]
          Length = 344

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 154/337 (45%), Positives = 214/337 (63%), Gaps = 1/337 (0%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +     L  L  ++   + W++V++A  +  +   L   +S   E+Q ++      L   
Sbjct: 2   EGKEATLRELEKQSAQENFWEDVVKAGKISEQIAALKRQLSEYSELQKKIETIEFFLNDN 61

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
               D  + +E        +  +   + + LLSGE D N  +L ++AGAGGTES DW  M
Sbjct: 62  EACADPEVGKELEKEFAFCESCLAVWETQRLLSGEVDKNSCFLSINAGAGGTESCDWVEM 121

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMY+RWA +  +K + ++  DGE AGIK  TL + G  AYG+ K E GVHRLVRISP+
Sbjct: 122 LFRMYSRWASRHHWKVDVIDRLDGEVAGIKHITLKLTGEYAYGYAKAESGVHRLVRISPF 181

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           DSN++RHTSF+S+ V+P VDD I+IEI  +D RIDT+R+SGAGGQHVN T+SAVRITH+P
Sbjct: 182 DSNAKRHTSFASVDVFPEVDDQIQIEILPNDLRIDTFRSSGAGGQHVNVTESAVRITHLP 241

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316
           TG+VV CQ ERSQ +N+     +LRA+LY+ ELQ+R E   +    K EI WG QIR+YV
Sbjct: 242 TGIVVSCQNERSQLQNRESCMKVLRARLYQRELQERLERRLLERKDKKEIAWGSQIRNYV 301

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
            QPY +VKD+RT  E  +   ++DG+ LD+F+K  LA
Sbjct: 302 FQPYTLVKDVRTGYEVGNIQAMMDGELLDEFIKVYLA 338


>gi|319407240|emb|CBI80879.1| peptide chain release factor RF-2 [Bartonella sp. 1-1C]
          Length = 333

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 216/320 (67%), Positives = 264/320 (82%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           LW +  +A+ +MRERQ+L+++++  +     L + + L+ +  EE+D  I+ E  + +++
Sbjct: 2   LWNDARKAQDMMRERQNLEDSMNSTQLFTQTLEECIELIAMGEEENDVEIITEAENTIRQ 61

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +K E++ KQ  +LLSGEADSND YLE+HAGAGGTESQDWA+MLLRMYTRWAE+ K K E 
Sbjct: 62  LKSEIDKKQIATLLSGEADSNDTYLEIHAGAGGTESQDWASMLLRMYTRWAEQHKMKVEV 121

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           LE HDGEEAGIKSAT+L+KG NAYG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPV
Sbjct: 122 LETHDGEEAGIKSATILVKGHNAYGLLKTESGVHRLVRISPYDSNARRHTSFASIWVYPV 181

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           VD++IEI++SE+D RIDTYRASGAGGQHVNTTDSAVRITHI T +VVQCQ ERSQHKNKA
Sbjct: 182 VDENIEIDLSEADVRIDTYRASGAGGQHVNTTDSAVRITHIKTDIVVQCQTERSQHKNKA 241

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            AW+MLRA+LYE EL+KREE  N  E+SKTEIGWG QIRSYVLQPYQ+VKDLRT +E T 
Sbjct: 242 TAWSMLRARLYEEELKKREEATNAVEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTD 301

Query: 335 PSDVLDGDLDDFMKATLAIK 354
           P  VL+GDLD F++A LA +
Sbjct: 302 PQTVLNGDLDTFIEAALAQR 321


>gi|317179974|dbj|BAJ57760.1| peptide chain release factor 2 [Helicobacter pylori F32]
          Length = 381

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 241/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 31  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 90

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L ++  L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 91  KNSLDESTELFELAQNDNDEVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQ 150

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 151 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 210

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 211 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 270

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 271 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 328

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 329 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 380


>gi|325922147|ref|ZP_08183937.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
           gardneri ATCC 19865]
 gi|325547382|gb|EGD18446.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
           gardneri ATCC 19865]
          Length = 329

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 170/318 (53%), Positives = 224/318 (70%), Gaps = 1/318 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W +   A+ L RER  L+  +  I ++   L D   LLELA  E D         +L + 
Sbjct: 2   WNDSERAQALGRERSMLEKTVIGIADVLAGLADAADLLELAESEQDEDTAVAVLADLDKY 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           ++ VE  +F+ + SG+ D  +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE +
Sbjct: 62  QVHVEKLEFQRMFSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTELM 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E+  GE AGIKSAT+ I+G   YGWLK E GVHRLVR SP+DS++RRHTSF+S++V P V
Sbjct: 122 EVSGGEVAGIKSATIRIEGEFVYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEV 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT  VV CQ  RSQH+N+  
Sbjct: 182 DDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRDN 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A  ML AKLYELE+QKR    +  E++K++IGWG QIR+YVL     +KDLRT IE++  
Sbjct: 242 AMKMLAAKLYELEVQKRNVERDALEATKSDIGWGSQIRNYVLD-QSRIKDLRTGIERSDT 300

Query: 336 SDVLDGDLDDFMKATLAI 353
             VLDGDLD+F++A+L  
Sbjct: 301 QKVLDGDLDEFVEASLKA 318


>gi|237748574|ref|ZP_04579054.1| peptide chain release factor 1 [Oxalobacter formigenes OXCC13]
 gi|229379936|gb|EEO30027.1| peptide chain release factor 1 [Oxalobacter formigenes OXCC13]
          Length = 360

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 182/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    RL+ ++     P +  +    + L +E   L   ++   +      D     E+
Sbjct: 9   LEQLANRLTEIDELLMQPDVASDQDNYRKLSKEHAELGPVVALYNDYVQVQADVDAAQEM 68

Query: 76  ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +     QE     + ++    +  Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 69  LADPEMKEFAQEEISAAEGKMTAIEDDLQLMLLPKDPNDDKNIFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AEK ++K E +   + E  G +   + + G + Y  LK E G HR+ R+ 
Sbjct: 129 ADLLRMYSRFAEKNRWKVEIVSASESELGGYREVIVRLIGNDVYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  DD  ++ I+ +D RIDT+RASGAGGQH+N TDSA+RITH
Sbjct: 189 VTETQGRIHTSACTVAVMPEADDVSDVHINPADIRIDTFRASGAGGQHINKTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            PTG+VV+CQ +RSQHKNKAQA  +L A++ + ++Q  E+ A    + K+ IG G    +
Sbjct: 249 FPTGIVVECQDDRSQHKNKAQAMQVLAARIKDRQMQ--EQHAKEAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       ++DGD+D+ + A  A  +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLYKLEFIMDGDMDELVNALAAEHR 349


>gi|260904322|ref|ZP_05912644.1| peptide chain release factor 2 [Brevibacterium linens BL2]
          Length = 372

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 139/353 (39%), Positives = 211/353 (59%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L +    +  + D DN    ++ +  +   P  W +   A+ +     H    +  +++ 
Sbjct: 12  LRQTYKAILDVSDLDNLRSEVAEMTEQASAPSFWDDPDSAQKISATLSHKQGTLEKLEKF 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            +R+ D  +++E++ +E D     E   +L+++  ++   +  +LL+ E D   A + V 
Sbjct: 72  GERIDDAELIIEMSEDEGDEDSKVEAERDLKKLHDQLAELEISTLLNHEYDERSAVVTVR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ DWA ML+RMY RWAE R +  + L+    E AGIKSAT+ +  P AYG L 
Sbjct: 132 SGAGGDDATDWAQMLIRMYVRWAENRGYNVQQLDTSYAEGAGIKSATIQVNAPYAYGTLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++ +  +EI E+D RID YR+SG GGQ 
Sbjct: 192 VEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLIESTDHVEIDENDLRIDVYRSSGPGGQS 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH PTGVVV  Q E+SQ +N+  A  +L+++L +L+ ++           
Sbjct: 252 VNTTDSAVRITHAPTGVVVSMQNEKSQIQNREAAMRVLQSRLLDLKRKEEAAEKKELAGD 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +  WG Q+RSYV  PYQMVKDLRT  E  +PS+V DGDLD  ++A +  +K
Sbjct: 312 -IKASWGDQMRSYVTHPYQMVKDLRTGYEVNNPSNVFDGDLDGLIEAGIRWRK 363


>gi|57241933|ref|ZP_00369873.1| peptide chain release factor 2 [Campylobacter upsaliensis RM3195]
 gi|57017125|gb|EAL53906.1| peptide chain release factor 2 [Campylobacter upsaliensis RM3195]
          Length = 368

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 170/353 (48%), Positives = 233/353 (66%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L +++  +  +   +    +LS +  +  DP+ W N   A +L +E+  + N +   +  
Sbjct: 13  LEQKVKNIASIIKPNELRVKLSEIEMQENDPNFWNNAKNAAVLGKEKTKITNLLKAYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L ++A  E+D   L+   ++  +++  +   +   LLSGE D+ +A + +H
Sbjct: 73  FNALNDANELFDMANSENDDETLKALFEDAPKLEDNITSLEISMLLSGENDNKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA+ML RMY R+ E+  FK E L+  +G+EAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGDEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDLRIDFYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITHIPT +VVQCQ +RSQHKNKA A+ MLR++LYELEL K+E +AN     
Sbjct: 253 VNKTESAVRITHIPTNIVVQCQNDRSQHKNKATAFKMLRSRLYELELMKQEAVAN--SGE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K+E+GWG QIRSYVL PYQ VKD R+N   ++   +LDGD+   ++  L   K
Sbjct: 311 KSEMGWGHQIRSYVLFPYQQVKDTRSNEAFSNAEGILDGDIKKMIEGVLIAMK 363


>gi|256851470|ref|ZP_05556859.1| peptide chain release factor 2 [Lactobacillus jensenii 27-2-CHN]
 gi|260660891|ref|ZP_05861806.1| peptide chain release factor 2 [Lactobacillus jensenii 115-3-CHN]
 gi|282933470|ref|ZP_06338846.1| peptide chain release factor 2 [Lactobacillus jensenii 208-1]
 gi|297206285|ref|ZP_06923680.1| peptide chain release factor RF2 [Lactobacillus jensenii JV-V16]
 gi|256616532|gb|EEU21720.1| peptide chain release factor 2 [Lactobacillus jensenii 27-2-CHN]
 gi|260548613|gb|EEX24588.1| peptide chain release factor 2 [Lactobacillus jensenii 115-3-CHN]
 gi|281302401|gb|EFA94627.1| peptide chain release factor 2 [Lactobacillus jensenii 208-1]
 gi|297149411|gb|EFH29709.1| peptide chain release factor RF2 [Lactobacillus jensenii JV-V16]
          Length = 332

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 155/325 (47%), Positives = 210/325 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W N   A+ L+ E   L        ++     D    LEL  EE D  +  E  
Sbjct: 1   MADPDFWNNQESAQKLISETNKLKEKRDHFNDLAQAFSDEETALELLKEEPDDDLQVEVE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L+++K      +   LLSG+ D+N+A +E+H GAGGTE+ DWA ML+RMY R++E   
Sbjct: 61  TDLEKLKDSFHQYELNLLLSGKYDANNALMEIHPGAGGTEAMDWAQMLMRMYQRFSEAHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E  +   G+EAG+KS ++LIKG NAYG LKGE GVHRLVRISP+D+  RRHTSF+S+
Sbjct: 121 FTFEIDDYEPGDEAGVKSVSILIKGTNAYGLLKGEMGVHRLVRISPFDAAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDSIE++I+ +D RID +R+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ
Sbjct: 181 EVIPEIDDSIEVDINPADLRIDVFRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK  A N LRAKL++LE +K+ +     +  + +I WG QIRSYV  PY MVKD RTN
Sbjct: 241 FQNKETAMNALRAKLFQLEEEKKRKEKEKLKGVQQDIAWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E +  + V+DG LD+ + + L  +
Sbjct: 301 FETSDVNGVMDGKLDNLIYSFLQWR 325


>gi|317181479|dbj|BAJ59263.1| peptide chain release factor 2 [Helicobacter pylori F57]
          Length = 381

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 175/352 (49%), Positives = 242/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+ HL+  +   ++ 
Sbjct: 31  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVHLNRLLETYQKT 90

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L ++  L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 91  KNSLDESTELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 150

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 151 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 210

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 211 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 270

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 271 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQNTAKN--EE 328

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 329 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 380


>gi|57238478|ref|YP_179609.1| peptide chain release factor 2 [Campylobacter jejuni RM1221]
 gi|73621535|sp|Q5HSX6|RF2_CAMJR RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|57167282|gb|AAW36061.1| peptide chain release factor 2 [Campylobacter jejuni RM1221]
 gi|315058910|gb|ADT73239.1| Peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           S3]
          Length = 365

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 167/349 (47%), Positives = 228/349 (65%), Gaps = 2/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  +  +   +N   RL  +      P  W +V +A ++ +E+  + N +   +  
Sbjct: 13  LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGVIGKEKTKITNLLKNYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L +LA  E+D   L+   ++  +++  +   +   LLSGE D  +A + +H
Sbjct: 73  FNALNDASELFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA++L RMY R+ E+  FK E L+  +GEEAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN     
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANT--GE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K+EIGWG QIRSYVL PYQ VKD R+    +   ++LDGD+   ++  L
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVL 359


>gi|154502573|ref|ZP_02039633.1| hypothetical protein RUMGNA_00386 [Ruminococcus gnavus ATCC 29149]
 gi|153796765|gb|EDN79185.1| hypothetical protein RUMGNA_00386 [Ruminococcus gnavus ATCC 29149]
          Length = 356

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 117/351 (33%), Positives = 190/351 (54%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + R   +  + ++P +  +    + LM+E+  L   +    E +    +   
Sbjct: 1   MFDKLEDLLIRYEEVMGELQEPGVANDPERFRKLMKEQSDLAPIVEAYNEYKQCKQNIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   + L   K  VE  +       L     D  +  +E+ AGAGG
Sbjct: 61  SLMMLEEESDEEMRELAKEELNESKARVEELEQELKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE R+++TE + +++    G K    +I G  AY  +K E GV
Sbjct: 121 DEAALFAAEVYRMYLHYAESRRWRTEMISLNENGIGGFKECVFMITGQGAYSRMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + +++ I E D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMP-EAEDVDVVIDEKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLYELEL+K++  +   E+ +++IG
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQ--SAEAEARRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+GDLD+ + + +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDTILNGDLDEVIDSLIAADQ 347


>gi|260460705|ref|ZP_05808955.1| peptide chain release factor 2 [Mesorhizobium opportunistum
           WSM2075]
 gi|259033282|gb|EEW34543.1| peptide chain release factor 2 [Mesorhizobium opportunistum
           WSM2075]
          Length = 322

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 220/309 (71%), Positives = 263/309 (85%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ L+  I+ +K +   L DN+ L+EL  EE D  ++ E    L+ ++ E + +Q E
Sbjct: 1   MRERQGLEEGIASVKGLTQALEDNIGLIELGEEEGDEGVIAEAEAALRSMQGEAKARQVE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD+ND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+R+FK E LE+HDGEEAGI
Sbjct: 61  TLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERRRFKVEVLEVHDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSF+S+WVYPV+DD+IEI++SE
Sbjct: 121 KSATLLIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVIDDTIEIDVSE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD RIDTYR+SG+GGQHVNTTDSAVRITHI TG+ V CQ ERSQHKNKA+AW MLR++LY
Sbjct: 181 SDVRIDTYRSSGSGGQHVNTTDSAVRITHIATGIAVACQAERSQHKNKAKAWEMLRSRLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KRE +AN  E+SK++IGWG QIRSYVLQPYQ+VKDLRT +E TSPS VLDGDLDD
Sbjct: 241 EEELKKREAVANATEASKSDIGWGHQIRSYVLQPYQLVKDLRTGVESTSPSSVLDGDLDD 300

Query: 346 FMKATLAIK 354
           FM+A+L+ +
Sbjct: 301 FMEASLSQR 309


>gi|255065586|ref|ZP_05317441.1| peptide chain release factor 1 [Neisseria sicca ATCC 29256]
 gi|255050411|gb|EET45875.1| peptide chain release factor 1 [Neisseria sicca ATCC 29256]
          Length = 358

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 121/345 (35%), Positives = 178/345 (51%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  + +    P    ++   + L RE   L   +   +  Q    D     E+
Sbjct: 9   LQQLSDRLEEVTSLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQQAQSDLADAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGTESQDW 133
             + +             ++K++    + + L       D  + ++EV AG GG E+  +
Sbjct: 69  LSDPE-MKDFAAEEIEAAKVKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAALF 127

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+
Sbjct: 128 AGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSAVRIT
Sbjct: 188 PATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G    
Sbjct: 248 HLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R N+       V+DGDL++   A +A  +
Sbjct: 306 RIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQ 349


>gi|225020766|ref|ZP_03709958.1| hypothetical protein CORMATOL_00773 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224946468|gb|EEG27677.1| hypothetical protein CORMATOL_00773 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 368

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 218/353 (61%), Gaps = 3/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + +  +   R   L  K  DP LW +   A+ +  E   +   +  ++ +
Sbjct: 12  LDTTLTSIEKVMNPADLSDRARELAAKAADPSLWDDPEHAQQVTSELSQVQVQLKRLQSL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  I+ E  L E++        + L  ++ +++  +  ++LSGE DS +A + + 
Sbjct: 72  RSRLTDLPIMYE--LAEEEGEGADIADEELADLRADIDALEVTTMLSGEYDSREALINIR 129

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ DWA ML+RMY RWAEK+  K E  +I   EEAGIKSAT ++ G   YG L 
Sbjct: 130 SGAGGVDAADWAEMLMRMYIRWAEKQGRKVEVYDISYAEEAGIKSATFIVHGEYMYGTLS 189

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQGVHRLVRISP+D+ +RR TSF+ + V PVV+ +  I+I +S+ R+D YR+SG GGQ 
Sbjct: 190 VEQGVHRLVRISPFDNQARRQTSFAEVEVLPVVEITDHIDIPDSELRVDVYRSSGPGGQS 249

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL E + Q+     +   + 
Sbjct: 250 VNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASALRVLQAKLLERKRQEERAELDALGAG 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+R+YVL P+QMVKDLRT  E   P  VLDGDLD F++A +  +K
Sbjct: 310 -GNASWGNQMRNYVLHPFQMVKDLRTGFEVGDPQKVLDGDLDKFLEAGIRWRK 361


>gi|153952316|ref|YP_001398744.1| peptide chain release factor 2 [Campylobacter jejuni subsp. doylei
           269.97]
 gi|166223625|sp|A7H5G4|RF2_CAMJD RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|152939762|gb|ABS44503.1| peptide chain release factor 2 [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 365

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 170/353 (48%), Positives = 229/353 (64%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  +  +    N   RL  +      P  W +V +A ++ +E+  + N +   +  
Sbjct: 13  LKNKVGNIASIIKPKNIQTRLKEIEELENSPSFWNDVKQAGIIGKEKTKITNLLKNYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L +LA  E+D   LQ   ++  +++  +   +   LLSGE D  +A + +H
Sbjct: 73  FNALNDASELFDLANSENDIETLQALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA++L RMY R+ E+  FK E L+  +GEEAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN  E  
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANSSE-- 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K+EIGWG QIRSYVL PYQ VKD R+    +   ++LDGD+   ++  L   K
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363


>gi|33595093|ref|NP_882736.1| peptide chain release factor 1 [Bordetella parapertussis 12822]
 gi|46576758|sp|Q7WCE3|RF1_BORPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33565170|emb|CAE35966.1| peptide chain release factor 1 [Bordetella parapertussis]
          Length = 360

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 122/344 (35%), Positives = 181/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    RL  ++    +P    ++   + L RER  L+  +           D     E+
Sbjct: 9   LEQLAHRLIEVDALLAEPETAADMDRFRKLSRERAELEPVVEAFNAFLGVEADVATAQEM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  ++ ++       RI+      Q   L     D    +LE+ AG GG ES  ++
Sbjct: 69  LSDPDMKAMAEDEIKTGRARIEEMEAALQLLLLPRDPDDGRSLFLEIRAGTGGDESALFS 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE R ++ E +   + E  G K   + I G  AYG LK E G HR+ R+ 
Sbjct: 129 GDLLRMYTRYAETRGWRVEIMSESESELGGYKEVIVRIDGDGAYGRLKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D   +I I+ SD RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATEAQGRIHTSACTVAVMPEADAMSDIVINPSDLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A+L + E+++R+  +      K+ IG G    +
Sbjct: 249 VPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKEMRERQ--SKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       +++GDLD+   A LA  +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLYKLQQIMEGDLDELTGALLAEHQ 349


>gi|148378178|ref|YP_001252719.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC
           3502]
 gi|148287662|emb|CAL81727.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC
           3502]
          Length = 325

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 147/323 (45%), Positives = 215/323 (66%), Gaps = 1/323 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++P+ W ++ EA+ +  E ++L + ++    +++ + D + L E+ L E+D  + +E  
Sbjct: 1   MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEM-LSEEDDDMKKEII 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + IK E +  + E+LLSGE D N+  + +H+  GGT++QDW +ML RMYTRWAEK  
Sbjct: 60  SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSEVGGTDAQDWTDMLFRMYTRWAEKEG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  + +++ + E+AGIKS TL I G   YG+LK E+G+HRLVRISP+++N +R TSF+SI
Sbjct: 120 FAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASI 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + D  EIEI   D +IDTYRA GAGGQHVN T+SAVRITH+PTG++VQCQ ERSQ
Sbjct: 180 EVLPELTDDQEIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK  A  +L++KL EL+ +  +E          ++GWG QIRSYV  PY +VKD RT 
Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E ++   V++GD++ F+   L 
Sbjct: 300 AETSNVDSVMNGDINIFITQYLK 322


>gi|316984833|gb|EFV63790.1| peptide chain release factor 1 [Neisseria meningitidis H44/76]
 gi|325140851|gb|EGC63361.1| peptide chain release factor 1 [Neisseria meningitidis CU385]
 gi|325144920|gb|EGC67204.1| peptide chain release factor 1 [Neisseria meningitidis M01-240013]
          Length = 385

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 120/349 (34%), Positives = 176/349 (50%), Gaps = 8/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +       RL  +      P    ++   + L RE   L   +   +  +    D  
Sbjct: 31  SILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQSDLA 90

Query: 71  ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E+  + +      E  +  +          Q   L     D  + ++E+ AG GG E
Sbjct: 91  DAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIRAGTGGDE 150

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR
Sbjct: 151 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHR 210

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSA
Sbjct: 211 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 270

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G
Sbjct: 271 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 328

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V+DGDL++   A +A  +
Sbjct: 329 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQ 376


>gi|297564871|ref|YP_003683843.1| hypothetical protein Mesil_0394 [Meiothermus silvanus DSM 9946]
 gi|296849320|gb|ADH62335.1| hypothetical protein Mesil_0394 [Meiothermus silvanus DSM 9946]
          Length = 375

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 149/352 (42%), Positives = 205/352 (58%), Gaps = 5/352 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L+ L G  D      RL  L  K  DPHLW N  EAK + +E   L  A+   + +
Sbjct: 16  LQHRLDALRGYLDIAGKESRLRELEVKLNDPHLWDNPTEAKAISQEATRLRKAVENYRRL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L   L L      E+   +  E     + ++        ++LLS     N A + + 
Sbjct: 76  ESDLQGLLELWPELSAEERAQMQPELDKAGRELEDLYH----QTLLSFPYAENAAIVTIK 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTE+ DWA ML RMYTR+AE+  FK E +++  G EAGI  A  +++G  AYG L 
Sbjct: 132 PGAGGTEACDWAEMLYRMYTRFAERHGFKVEVVDVEPGAEAGIDLAQFIVRGEYAYGLLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+++  +R TSF+++ V P VD+S+E+ I+  D RID  R+ G GGQ 
Sbjct: 192 AEAGVHRLVRPSPFNAQGKRQTSFAALEVMPEVDESVEVAINPEDLRIDVMRSQGKGGQG 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+ H+PTG++V+CQ  RSQ KNK  A N+LR+KL+E+E +K++E     +  
Sbjct: 252 VNTTDSAVRVVHLPTGIMVKCQITRSQQKNKELAMNILRSKLFEIEWKKKQEELARLKGE 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                WG QIRSYVL     VKD RT   +  P +VLDGDL++ + A L  K
Sbjct: 312 SRPNEWGSQIRSYVLDKQ-YVKDHRTGEMRHDPENVLDGDLENLVWAGLEWK 362


>gi|296122601|ref|YP_003630379.1| hypothetical protein Plim_2354 [Planctomyces limnophilus DSM 3776]
 gi|296014941|gb|ADG68180.1| hypothetical protein Plim_2354 [Planctomyces limnophilus DSM 3776]
          Length = 372

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 157/357 (43%), Positives = 229/357 (64%), Gaps = 4/357 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ ++  L    D+D    R++ +N     P  W +  +A+ L+ E ++++ ++  ++E
Sbjct: 11  ELTSRILQLRDSLDYDQWQARVAEINEAMSAPDFWDHQEKAQALVTELRNVNGSLKPLQE 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + D   +  +L E   E+D      E    L  ++ + +  + ++++S   D   AYL++
Sbjct: 71  LIDGTEELAVLREFLAEDDSSESRDEMVGLLASLQEKFQQVELKAMMSRPEDPCSAYLQI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG GGT++ DWA MLLRMYTRWAE R F+TE +EI + EEAGI++ATL I+G   YG L
Sbjct: 131 QAGEGGTDASDWAAMLLRMYTRWAEDRGFETELIEISEAEEAGIRNATLAIRGEYVYGLL 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI---DTYRASGA 238
           +GE GVHRL+RISP+D   RR TSF+++ V P  DD+I+I+I+  D +I   D +RASGA
Sbjct: 191 RGETGVHRLIRISPFDGAGRRQTSFAAVDVIPEPDDTIDIDINWEDPKIIREDIFRASGA 250

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVN T SA+R+TH+PT  VVQCQ ERSQHKN++    ML AKL +LE  KRE  A  
Sbjct: 251 GGQHVNKTSSAIRLTHLPTNTVVQCQNERSQHKNRSWCRKMLVAKLLQLETVKRENEAAH 310

Query: 299 GESSKTEIGW-GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               K++IG+ G  IR+YVL P Q VKD RTN++  +P  VLDG +D+F++A L   
Sbjct: 311 KRGQKSKIGFGGETIRNYVLNPEQFVKDTRTNLKVGTPMPVLDGRIDEFLEAYLRWD 367


>gi|332290276|ref|YP_004421128.1| peptide chain release factor 1 [Gallibacterium anatis UMN179]
 gi|330433172|gb|AEC18231.1| peptide chain release factor 1 [Gallibacterium anatis UMN179]
          Length = 360

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 187/344 (54%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L     DP +  +  + +   +E   L++ +      +    D      L
Sbjct: 9   LETLDERYEELQALLGDPSVINDQEKFRAYSKEYSQLEDVVKCFARWKQLNSDLQEAQIL 68

Query: 76  ALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +     + +E   +  + I+   +  Q   L     D  + YLE+ AG GG E+  +A
Sbjct: 69  LDDPSMKEMAEEEIAHCTQGIEESEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE ++++TE L  ++ E+ G K   + I G N YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESKRWRTEVLSANESEQGGYKEIIVKISGENVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESALPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A ++L ++L + E +++       ++ ++ +G G +   
Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLASRLVQAEEERKAAEQ--ADTRRSLLGSGDRSDK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      ++++G +DD ++  +   +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLYRLDEIMNGKIDDLIQPIITEYQ 349


>gi|262380518|ref|ZP_06073672.1| peptide chain release factor 2 [Acinetobacter radioresistens SH164]
 gi|262297964|gb|EEY85879.1| peptide chain release factor 2 [Acinetobacter radioresistens SH164]
          Length = 310

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 168/307 (54%), Positives = 221/307 (71%), Gaps = 1/307 (0%)

Query: 47  RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
           +E+  L+N I+ ++ +  +L D   +L+LA+E DD S+L +    L   +  +   +F  
Sbjct: 3   KEKGELENVINVLEGLSTQLEDAQAMLDLAVEADDESLLADVQAELSSAEEALAKLEFRR 62

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S   D N  Y+E+ AG+GGTE+QDWA+MLLRMY RW E+  FK E +E  DG+ AGIK
Sbjct: 63  MFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEESDGDVAGIK 122

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS+++V P VDD+IEI+I+ S
Sbjct: 123 SATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFVSPEVDDNIEIDINPS 182

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R DTYRASGAGGQH+N TDSAVR+TH+PTG+VV CQ +RSQH N+  AW  LRAKLYE
Sbjct: 183 DVRTDTYRASGAGGQHINKTDSAVRLTHMPTGIVVACQNQRSQHANRDHAWKQLRAKLYE 242

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LE+ KR E A   E SK++IGWG QIRSYVL     +KDLRT +E ++   VLDGDLD F
Sbjct: 243 LEMSKRNEAAQALEDSKSDIGWGSQIRSYVLDD-SRIKDLRTGVENSNTGAVLDGDLDKF 301

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 302 IEASLKQ 308


>gi|58582496|ref|YP_201512.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84624384|ref|YP_451756.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|166711947|ref|ZP_02243154.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzicola
           BLS256]
 gi|188575993|ref|YP_001912922.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|58427090|gb|AAW76127.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84368324|dbj|BAE69482.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188520445|gb|ACD58390.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 329

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 172/318 (54%), Positives = 224/318 (70%), Gaps = 1/318 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W +   A+ L RER  L+  +  I ++   L D   LLELA  E D         +L + 
Sbjct: 2   WNDAERAQALGRERSMLEKTVIGIADVLSGLVDAGDLLELAESEQDEDTALAVIADLDKY 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           +  VE  +FE + SG+ D  +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE +
Sbjct: 62  QTHVEKLEFERMFSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTELM 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E+  GE AGIKSAT+ I+G  AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P V
Sbjct: 122 EVSGGEVAGIKSATVRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEV 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT  VV CQ  RSQH+N+  
Sbjct: 182 DDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRDN 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A  ML AKLYELE+QKR    +  E++K++IGWG QIR+YVL     +KDLRT IE++  
Sbjct: 242 AMKMLAAKLYELEVQKRNVERDALEATKSDIGWGSQIRNYVLD-QSRIKDLRTGIERSDT 300

Query: 336 SDVLDGDLDDFMKATLAI 353
             VLDGDLD+F++A+L  
Sbjct: 301 QKVLDGDLDEFVEASLKA 318


>gi|121612135|ref|YP_001001104.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167005998|ref|ZP_02271756.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|166223626|sp|A1W163|RF2_CAMJJ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|87249819|gb|EAQ72778.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 365

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 168/353 (47%), Positives = 229/353 (64%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  +  +   +N   RL  +      P  W +V +A ++ +E+  + N +   +  
Sbjct: 13  LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L +LA  E+D   L+   ++  +++  +   +   LLSGE D  +A + +H
Sbjct: 73  FNALNDANELFDLANSENDTETLEALFNDASKLEDTITSLEISMLLSGENDGKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA++L RMY R+ E+  FK E L+  +GEEAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN     
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANT--GE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K+EIGWG QIRSYVL PYQ VKD R+    +   ++LDGD+   ++  L   K
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363


>gi|227494927|ref|ZP_03925243.1| peptide chain release factor RF2 [Actinomyces coleocanis DSM 15436]
 gi|226831379|gb|EEH63762.1| peptide chain release factor RF2 [Actinomyces coleocanis DSM 15436]
          Length = 372

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 147/358 (41%), Positives = 220/358 (61%), Gaps = 10/358 (2%)

Query: 7   LNCLGGLFD-------WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
           +  L G  +        D    R++ L+ K   P LW N   A+ +  E  H    +  I
Sbjct: 9   IESLRGTLENIIAVTRPDELKARIAELSEKAAVPDLWDNPEAAQAVTSELSHTQAELGRI 68

Query: 60  KEIQDRLCDNLILLELALE--EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
           +++ +R+ D   ++E+A E  ++   +L+E   +L  I+  +   + ++LLSGE D   A
Sbjct: 69  EKMVERIDDLETIVEMAEEDLDEKDLLLEEAEADLAGIRQALADLEIKTLLSGEYDERSA 128

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            + + AGAGG ++ D+A MLLRMY RWAE+  + T+ ++    EEAG+KSAT  +  P A
Sbjct: 129 VVTIRAGAGGVDAADFAEMLLRMYLRWAERNGYPTKVMDTSYAEEAGLKSATFEVNAPYA 188

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           YG L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI ES+ +ID +R+SG
Sbjct: 189 YGTLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIETTDHIEIPESELKIDVFRSSG 248

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQ VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L +L  ++ +    
Sbjct: 249 PGGQSVNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLQLRHEEEQAAKK 308

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                  +  WG Q+RSYVLQPYQMVKDLRT+ E  +   V DG++DDF+ A +  +K
Sbjct: 309 ALAGD-VKASWGDQMRSYVLQPYQMVKDLRTSHENGNTGAVFDGEIDDFINAGIRWRK 365


>gi|255528153|ref|ZP_05394980.1| peptide chain release factor 2 [Clostridium carboxidivorans P7]
 gi|255508166|gb|EET84579.1| peptide chain release factor 2 [Clostridium carboxidivorans P7]
          Length = 326

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 158/324 (48%), Positives = 225/324 (69%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++P+ W +  +A+ +  E + L + +   KE++ ++ D   L +LA+EE+D S  ++  
Sbjct: 1   MQEPNFWNDTDKAQEITSEERFLKSRLDKYKELETKIQDAEFLTKLAIEENDLSSSKDII 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ I  E E  + E LLSGE D N+A +++H G GGT++QDW  MLLRMYTRWAEK+ 
Sbjct: 61  REVEEIDNETERFRIEILLSGEYDKNNAIMDIHVGVGGTDAQDWTEMLLRMYTRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++I   E+AGIKSATL I G  AYG+LK E+G+HRLVRISP+++N +R TSF+SI
Sbjct: 121 FKIETVDILPAEDAGIKSATLRIIGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASI 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + ++ +I+I   D ++DTYR+SGAGGQHVN T+SA+RITHIPTG+VVQCQ +RSQ
Sbjct: 181 EVLPELTNNQDIDIKPDDIKVDTYRSSGAGGQHVNKTESAIRITHIPTGIVVQCQNQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H N+ +A  ML+AKL EL+ +  +E          ++GWG QIRSYV QPY MVKD RT+
Sbjct: 241 HHNREEAMRMLKAKLAELKERAHKEKIEDLTGELKDMGWGSQIRSYVFQPYTMVKDHRTS 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
           +E  + + V+DGD+D F+   L  
Sbjct: 301 VECGNINAVMDGDIDQFINEYLKQ 324


>gi|33591871|ref|NP_879515.1| peptide chain release factor 1 [Bordetella pertussis Tohama I]
 gi|33599373|ref|NP_886933.1| peptide chain release factor 1 [Bordetella bronchiseptica RB50]
 gi|46576754|sp|Q7W023|RF1_BORPE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|46576762|sp|Q7WQE9|RF1_BORBR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33566969|emb|CAE30882.1| peptide chain release factor 1 [Bordetella bronchiseptica RB50]
 gi|33571515|emb|CAE40989.1| peptide chain release factor 1 [Bordetella pertussis Tohama I]
 gi|332381288|gb|AEE66135.1| peptide chain release factor 1 [Bordetella pertussis CS]
          Length = 360

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 122/344 (35%), Positives = 180/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    RL  ++    +P    ++   + L RER  L+  +           D     E+
Sbjct: 9   LEQLAHRLIEVDALLAEPETAADMDRFRKLSRERAELEPVVEAFNAFLGVEADVATAQEM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  ++ ++       RI+      Q   L     D    +LE+ AG GG ES  ++
Sbjct: 69  LSDPDMKAMAEDEIKTGRARIEEMEAALQLLLLPRDPDDGRSLFLEIRAGTGGDESALFS 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE R ++ E +   + E  G K     I G  AYG LK E G HR+ R+ 
Sbjct: 129 GDLLRMYTRYAETRGWRVEIMSESESELGGYKEVIARIDGDGAYGRLKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D   +I I+ SD RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATEAQGRIHTSACTVAVMPEADAMSDIVINPSDLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A+L + E+++R+  +      K+ IG G    +
Sbjct: 249 VPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKEMRERQ--SKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       +++GDLD+   A LA  +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLYKLQQIMEGDLDELTGALLAEHQ 349


>gi|262274708|ref|ZP_06052519.1| peptide chain release factor 1 [Grimontia hollisae CIP 101886]
 gi|262221271|gb|EEY72585.1| peptide chain release factor 1 [Grimontia hollisae CIP 101886]
          Length = 362

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 116/342 (33%), Positives = 179/342 (52%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     DP +  +    + L +E   L+  I      +    D     E+
Sbjct: 9   LEALSERYEEVQHLLGDPSVISDQDRFRSLSKEYSQLEEVIKCFSAYKQAESDLEAAQEM 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           A E+D         +     + I+   +  Q   L     D  + +LE+ AGAGG E+  
Sbjct: 69  ANEDDPEMREMAQEEVKAAKEDIERLTDELQVLLLPKDPNDERNCFLEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE + ++ E +  + GE  G K     + G  AYG +K E G HR+ R
Sbjct: 129 FAGDLFRMYSRFAESKGWRVEVINANHGEHGGYKEMIAKVNGDGAYGVMKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ + P + ++   EI+ +D +IDT+R+SGAGGQHVNTTDSA+RI
Sbjct: 189 VPATESQGRVHTSACTVAILPEIPEAEIPEINPADLKIDTFRSSGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG VV+CQ ERSQHKNKA+A  +L A+L + E +KR        + +  +G G   
Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARLIKAEEEKRAAEQ--ASTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +IR+Y   P   V D R N+      +V++GDLD  ++  +
Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTVYRLDEVMEGDLDSLIQPII 347


>gi|226947396|ref|YP_002802487.1| peptide chain release factor 2 [Clostridium botulinum A2 str.
           Kyoto]
 gi|226842678|gb|ACO85344.1| peptide chain release factor 2 [Clostridium botulinum A2 str.
           Kyoto]
          Length = 325

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 149/323 (46%), Positives = 217/323 (67%), Gaps = 1/323 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++P+ W ++ EA+ +  E ++L + ++    +++ + D + L E+ L E+D  + +E  
Sbjct: 1   MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEM-LSEEDDDMKKEII 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + IK E +  + E+LLSGE D N+  + +H+G GGT++QDW +ML RMYTRWAEK  
Sbjct: 60  SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  + +++ + E+AGIKS TL I G   YG+LKGE+G+HRLVRISP+++N +R TSF+SI
Sbjct: 120 FTIKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASI 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + P + D  EIEI   D +IDTYRA GAGGQHVN T+SAVRITHIPTG++VQCQ ERSQ
Sbjct: 180 EILPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK  A  +L++KL EL+ +  +E          ++GWG QIRSYV  PY +VKD RT 
Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E ++   V++GD++ F+   L 
Sbjct: 300 AETSNVDSVMNGDINIFITQYLK 322


>gi|310829178|ref|YP_003961535.1| peptide chain release factor 1 [Eubacterium limosum KIST612]
 gi|308740912|gb|ADO38572.1| peptide chain release factor 1 [Eubacterium limosum KIST612]
          Length = 357

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 122/348 (35%), Positives = 193/348 (55%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL---CDNLIL 72
            D    +   LN K  DP +  +  + + LM+E  H++  I+   E +  L    ++  +
Sbjct: 5   LDFLSSKYQELNEKIADPDIIADQAQWQKLMKEHAHIEPIINRYNEYKKTLEGIEESKEM 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGAGGTES 130
           L     + D   + +   +    +      + +   L     D  +  +E+ AGAGG+E+
Sbjct: 65  LSDKSIDKDFEEMCKAELDELTERKAALEDELKVLLLPKDPNDDKNVIVEIRAGAGGSEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RM+TR+AE++ +K+E +  +  +  GIK  T  I+G  AY  LK E GVHR+
Sbjct: 125 ALFAGDLFRMFTRYAERQGWKSEIMNSNIPDIGGIKEITFSIEGRGAYSRLKYESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            RI   +S  R HTS +++ V P   + +EI+I+ +D RID YR+SG GGQ VNTTDSAV
Sbjct: 185 QRIPSTESGGRIHTSTATVAVLP-EAEDVEIDINPNDLRIDVYRSSGNGGQCVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH PTG+VV CQ E+SQ KNK +A  +L+A+L+E+E+QK++    I E+ K+++G G 
Sbjct: 244 RITHEPTGMVVTCQDEKSQLKNKEKAMKVLKARLFEIEMQKQQSE--IAENRKSQVGTGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +        LDG++D+ + A +   +
Sbjct: 302 RSERIRTYNF-PQGRVTDHRIGMTVYQLEAFLDGEIDEMVDALITSDQ 348


>gi|217034219|ref|ZP_03439638.1| hypothetical protein HP9810_886g56 [Helicobacter pylori 98-10]
 gi|216943387|gb|EEC22846.1| hypothetical protein HP9810_886g56 [Helicobacter pylori 98-10]
          Length = 381

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 173/352 (49%), Positives = 241/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 31  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 90

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L ++  L ELA  ++D   L    +    ++  V+  + + +LSGE D+++A + + 
Sbjct: 91  KNSLDESTELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIKIMLSGENDASNAIITIQ 150

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 151 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 210

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 211 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 270

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 271 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 328

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 329 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 380


>gi|325280722|ref|YP_004253264.1| Peptide chain release factor 2 [Odoribacter splanchnicus DSM 20712]
 gi|324312531|gb|ADY33084.1| Peptide chain release factor 2 [Odoribacter splanchnicus DSM 20712]
          Length = 370

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 138/358 (38%), Positives = 211/358 (58%), Gaps = 11/358 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D D     L  +  +T+ P  W +  +A+ +M++ + L   I   + +
Sbjct: 10  VEERSGALRRYLDIDRKKIELEEVEMRTQAPDFWNDAKQAEKVMKQVRELKGWIEGCEAV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + D  +L + A E +      +T          VE  + +++L GEAD     L+++
Sbjct: 70  SRSVDDLNVLFDFAKEGEATEEEVDTHYAET--LQLVEELELKNMLRGEADQMSCILKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA+ML+RMY RWAE   +K     I +G+EAGIK+ TL ++G  AYG+LK
Sbjct: 128 SGAGGTESQDWASMLMRMYMRWAEANNYKLTVSNIQEGDEAGIKTVTLQLEGDFAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SP+++  +R TSF+S++V P+VDDSIEI I+ +D   DT+R+ GAGGQ+
Sbjct: 188 GENGVHRLVRVSPFNAQGKRMTSFASVFVTPLVDDSIEIAINAADISWDTFRSGGAGGQN 247

Query: 243 VNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  ++ VR+ +            ++++  + RSQ  N+  A  +LR+ LY++ELQ+R  
Sbjct: 248 VNKVETGVRLRYNYKDPDTGETREILIENTETRSQLDNRENAMRLLRSMLYDMELQRRMA 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                ES+K +I WG QIRSYV    + VKD RTN + +    V+DG +D F+KA L 
Sbjct: 308 EQQKIESNKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVGGVMDGKIDGFIKAYLM 364


>gi|258541170|ref|YP_003186603.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256632248|dbj|BAH98223.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256635305|dbj|BAI01274.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256638360|dbj|BAI04322.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256641414|dbj|BAI07369.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256644469|dbj|BAI10417.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256647524|dbj|BAI13465.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256650577|dbj|BAI16511.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256653568|dbj|BAI19495.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 323

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 193/309 (62%), Positives = 241/309 (77%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRER  L N I  ++ ++  + D   L+ELA  E D  ++ E    L+ +  E + ++ E
Sbjct: 2   MRERTLLANQIEGVEALETNVRDTSELIELAEAEGDADLVAEGMATLRDLAEEAKRRETE 61

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEADSND YLEV+AGAGGTE+QDW  MLLRMYTRWAE   +K   +E  +GE+AG+
Sbjct: 62  SLLSGEADSNDCYLEVNAGAGGTEAQDWTEMLLRMYTRWAEAHGYKVTLMESSEGEQAGL 121

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+ GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPV+DDSIEIEI++
Sbjct: 122 KSATILVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVIDDSIEIEIND 181

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D ++DT+RASGAGGQHVN TDSA+RITH+PTG+VV CQ +RSQH+N+A A  MLRA+LY
Sbjct: 182 ADLKVDTFRASGAGGQHVNKTDSAIRITHMPTGIVVACQTDRSQHRNRATAMQMLRARLY 241

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E ELQKRE  A   E++KT+IGWG QIRSYVL PYQMVKDLRT +E  +P  VLDGDLD 
Sbjct: 242 EAELQKREAEAAAAEAAKTDIGWGHQIRSYVLAPYQMVKDLRTGVETGNPDAVLDGDLDA 301

Query: 346 FMKATLAIK 354
           FM A LA++
Sbjct: 302 FMAAALAMR 310


>gi|302671177|ref|YP_003831137.1| peptide chain release factor 1 PrfA [Butyrivibrio proteoclasticus
           B316]
 gi|302395650|gb|ADL34555.1| peptide chain release factor 1 PrfA [Butyrivibrio proteoclasticus
           B316]
          Length = 357

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 119/351 (33%), Positives = 195/351 (55%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ +++   +  +  DP +  +    + LM+E+++L+  +    E +        
Sbjct: 1   MFDKIEDILRKFEDITMELNDPSVIADQERFRKLMKEQKNLEPLVECYNEYKKCKETIDE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   D LQ  K ++   +       L     D  +  +E+ AG GG
Sbjct: 61  SLAMLDEESDPEMKEMLKDELQTAKDKIPELEDKLKILLLPKDPNDDKNVIVEIRAGVGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + R+YTR+AE++ ++ E + + D    GIK+ + +IKG  AY  LK E GV
Sbjct: 121 DEAALFAADMYRVYTRYAERQNWRVETMSVEDIGIGGIKTVSFMIKGNGAYSRLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS  ++ + P   + +E+EI  +DC+ D +RASG GGQ VNTTD
Sbjct: 181 HRVQRIPATESGGRIHTSAITVAIMP-EVEDVEVEIDMNDCKFDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+ CQ E+SQ +NKA+A  +LRAKLYELE +K+    N  E  ++++G
Sbjct: 240 SAVRLTHFPTGIVISCQDEKSQQQNKAKALRVLRAKLYELEQEKK--HNNEAELRRSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y       V D R  +       ++DGD+D+ + + +A  +
Sbjct: 298 SGDRSEKIRTYNFH-QGRVTDHRIGLTLYKIDQIMDGDIDEIIDSLIAADQ 347


>gi|269792424|ref|YP_003317328.1| peptide chain release factor 2 [Thermanaerovibrio acidaminovorans
           DSM 6589]
 gi|269100059|gb|ACZ19046.1| bacterial peptide chain release factor 2 (bRF- 2)
           [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 374

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 163/353 (46%), Positives = 218/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  L    D +   +++  L  +      W+   ++  + RE   L         +
Sbjct: 13  LRSRMCELRDSLDLEGLDRKIGELMERVSSDGFWE-REDSTEVARELSQLQQRRESFSAL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  + D   L EL    +D  + +E  D    ++  +E  Q  +LL  E D +DA + +H
Sbjct: 72  EREMEDLETLAELLQAGEDEDLSREFYDRAAEMERRLERTQVLTLLDEEYDRSDAIVGIH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG +SQDWA ML RMY RWAE+  FK   L+    +EAGIKS T  + G  AYG+LK
Sbjct: 132 AGAGGLDSQDWAEMLYRMYVRWAERNGFKVRVLDELPDQEAGIKSVTFQVSGEYAYGYLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE+GVHRLVRISP+D+  RRHTSF+S+ V PV+ D +EIEI   D ++DT+RASGAGGQ+
Sbjct: 192 GERGVHRLVRISPFDAAKRRHTSFASVEVMPVLPDDVEIEIRPEDIKMDTFRASGAGGQY 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVRITHIPTG+VV CQ ERSQH N+A A  ML++KL+E +L++R+E     +  
Sbjct: 252 VNMTDSAVRITHIPTGIVVSCQVERSQHMNRATALQMLKSKLFERQLRERQEQLEAIQGE 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K  I WG QIRSY LQP+Q+VKD R+  E  +   VLDGDLDD M A L   K
Sbjct: 312 KRAISWGSQIRSYTLQPFQLVKDHRSGCEIGNVQAVLDGDLDDLMMAYLKFYK 364


>gi|168177506|ref|ZP_02612170.1| peptide chain release factor 2 [Clostridium botulinum NCTC 2916]
 gi|182671219|gb|EDT83193.1| peptide chain release factor 2 [Clostridium botulinum NCTC 2916]
          Length = 325

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 148/323 (45%), Positives = 216/323 (66%), Gaps = 1/323 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++P+ W ++ EA+ +  E ++L + ++    +++ + D + L E+ L E+D  + +E  
Sbjct: 1   MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEM-LSEEDDDMKKEII 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + IK E +  + E+LLSGE D N+  + +H+G GGT++QDW +ML RMYTRWAEK  
Sbjct: 60  SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  + +++ + E+AGIKS TL I G   YG+LK E+G+HRLVRISP+++N +R TSF+SI
Sbjct: 120 FAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASI 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + D  EIEI   D +IDTYRA GAGGQHVN T+SAVRITH+PTG++VQCQ ERSQ
Sbjct: 180 EVLPELTDDQEIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK  A  +L++KL EL+ +  +E          ++GWG QIRSYV  PY +VKD RT 
Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKERIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E ++   V++GD++ F+   L 
Sbjct: 300 AETSNVDSVMNGDINMFITQYLK 322


>gi|134104518|pdb|2IHR|1 Chain 1, Rf2 Of Thermus Thermophilus
          Length = 365

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 155/353 (43%), Positives = 212/353 (60%), Gaps = 5/353 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+++L  LGG+FD      RL  L  + EDP LW +   A+ + +E   L   +   + 
Sbjct: 5   RLAQRLEGLGGIFDIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRS 64

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L   L L+E    E+  +        L+    +++    ++LL+      +A L +
Sbjct: 65  LESDLQGLLELMEELPAEEREA----LKPELEEAAKKLDELYHQTLLNFPHAEKNAILTI 120

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
             GAGGTE+ DWA MLLRMYTR+AE++ F+ E +++  G EAGI  A +L+KG NAYG L
Sbjct: 121 QPGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLL 180

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E GVHRLVR SP+D++ RRHTSF+ + V P VD+ +E+ +   + RID  RASG GGQ
Sbjct: 181 SPEAGVHRLVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQ 240

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+ H+PTG+ V CQ  RSQ KNK  A  +L+A+LYELE +KREE       
Sbjct: 241 GVNTTDSAVRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRG 300

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               I WG QIRSYVL     VKD RT + +  P +VLDGDL D + A L  K
Sbjct: 301 EVRPIEWGSQIRSYVLDK-NYVKDHRTGLMRHDPENVLDGDLMDLIWAGLEWK 352


>gi|325578168|ref|ZP_08148303.1| peptide chain release factor RF1 [Haemophilus parainfluenzae ATCC
           33392]
 gi|325159904|gb|EGC72033.1| peptide chain release factor RF1 [Haemophilus parainfluenzae ATCC
           33392]
          Length = 360

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 109/344 (31%), Positives = 183/344 (53%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     D  +  +  + +   +E   L++ +           +      +
Sbjct: 9   LESLKERYEELEALLGDASVISDQDKFRAYSKEYSQLEDVVKCFNRWNQLNSNIAEAELM 68

Query: 76  ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +   +  +  I+   +  Q   L     D  + YLE+ AG GG E+  +A
Sbjct: 69  LDDPEMKEMAEMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGDGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++       ++ +  +G G +   
Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQ--ADTRRNLLGSGDRSDK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      +V++G +D+ ++  +   +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLYRLDEVMNGKIDELIQPIITEYQ 349


>gi|301156075|emb|CBW15546.1| peptide chain release factor RF-1 [Haemophilus parainfluenzae T3T1]
          Length = 360

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 109/344 (31%), Positives = 183/344 (53%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     D  +  +  + +   +E   L++ +           +      +
Sbjct: 9   LESLKERYEELEALLGDASVISDQDKFRAYSKEYSQLEDVVKCFNRWNQLNSNIAEAELM 68

Query: 76  ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +   +  +  I+   +  Q   L     D  + YLE+ AG GG E+  +A
Sbjct: 69  LDDPEMKEMAEMEIEESKVEIEDVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGDGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++       ++ +  +G G +   
Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQ--ADTRRNLLGSGDRSDK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      +V++G +D+ ++  +   +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLYRLDEVMNGKIDELIQPIITEYQ 349


>gi|315586172|gb|ADU40553.1| peptide chain release factor RF2 [Helicobacter pylori 35A]
          Length = 385

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 241/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 35  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 94

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L ++  L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 95  KNSLDESAELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 154

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 155 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 214

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 215 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 274

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 275 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 332

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 333 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 384


>gi|293392123|ref|ZP_06636457.1| peptide chain release factor 1 [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290952657|gb|EFE02776.1| peptide chain release factor 1 [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 360

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 181/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+  +R   L     D  +  +  + +   +E   L++ +           +      L
Sbjct: 9   LDSLKERYEELEALLGDAAVISDQDKFRAYSKEYAQLEDVVKSFNRWNQLNSNLEEAQLL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q   +  +    +VE   Q   L     D  + YLE+ AG GG E+  +A
Sbjct: 69  LDDPEMKEMAQMEIEESKAELEQVEQYLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE +++  E L  ++ E+ G K    L+ G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAETKRWHVEVLSENESEQGGFKEIIALVSGDGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A ++L ++L + E +K  +     ++ +  +G G +   
Sbjct: 249 IPTGMVVECQDERSQHKNKAKALSVLASRLVQQEQEKLAQEQ--ADTRRNLLGSGDRSDK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      +V++G +DD ++  +   +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDDLIQPIITEYQ 349


>gi|83644569|ref|YP_433004.1| peptide chain release factor 1 [Hahella chejuensis KCTC 2396]
 gi|119361548|sp|Q2SL95|RF1_HAHCH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|83632612|gb|ABC28579.1| peptide chain release factor 1 [Hahella chejuensis KCTC 2396]
          Length = 360

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 183/344 (53%), Gaps = 9/344 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI-- 71
              D    R   +     DP +     + K L +E   L+  +   +E Q+ L       
Sbjct: 7   LKLDLLKDRYEEVGALLSDPDIISVQEKFKELSKEYAELEPVVQCYQEYQNALNAIEESK 66

Query: 72  -LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LL  +  +      +E +   +  +   +  Q   L     D ++ +LE+ AG GG E+
Sbjct: 67  LLLNDSDADMREMAKEELAAAEESSEQLEKDLQILLLPRDPRDGSNVFLEIRAGTGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY+R+AE +K+K E +    GE  G K     + G N +  LK E G HR+
Sbjct: 127 AIFAGDLFRMYSRYAELKKWKVEIVSESPGEHGGYKEVISRVAGDNVFNLLKFESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ + P V++  +++I+ +D R+DTYRASGAGGQHVN TDSA+
Sbjct: 187 QRVPETESQGRIHTSACTVAILPEVEEVGDVDINPADLRVDTYRASGAGGQHVNKTDSAI 246

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+P+G+VV+CQ ERSQHKN+A+A ++L+AKL     +K+ +     ++ K+ +G G 
Sbjct: 247 RITHLPSGIVVECQDERSQHKNRAKAMSLLKAKLLSSAQEKQAKEQ--AQTRKSLVGSGD 304

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D R N+      +V+ GDLD  ++  L
Sbjct: 305 RSERIRTYNY-PQGRITDHRINLTLYKLEEVVQGDLDPVIQPLL 347


>gi|110639213|ref|YP_679422.1| peptide chain release factor 2 [Cytophaga hutchinsonii ATCC 33406]
 gi|110281894|gb|ABG60080.1| bacterial peptide chain release factor 2 (bRF-2) [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 358

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 142/353 (40%), Positives = 216/353 (61%), Gaps = 2/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   +  L G   +D+ +  +      +  P  W +  EA+ ++R  ++          
Sbjct: 8   ELKASILALRGYLGYDSKMDEIKAEQELSLAPTFWDDSKEAEKILRSIKNKKVWTDPYDA 67

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +  +L D   L E     D              +   +E  +F+ +LS E D   A LE+
Sbjct: 68  LLTKLGDLEALNEFYQAGDIDDKE--MDAEFAAVAKVLEELEFKKMLSAEEDQLSAVLEI 125

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           + GAGGTES DWA+ML+RMY  W EK  +    +    GE AGIK A+L I+G  AYG L
Sbjct: 126 NPGAGGTESNDWADMLMRMYIMWGEKNGYTVREIVNQPGEVAGIKFASLGIEGQFAYGNL 185

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR SP++++ +R TSF+S++VYP VD++I IEI+  D   DT+RA GAGGQ
Sbjct: 186 KSEIGVHRLVRDSPFNADGKRQTSFASVYVYPEVDETINIEINMGDVEWDTFRAGGAGGQ 245

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++AVR+ H P+G++++CQQERSQ +NK +A  +L+++LY++E+ KR E     E 
Sbjct: 246 NVNKVETAVRLKHKPSGLIIECQQERSQIQNKDKALKLLKSRLYQIEIDKRNEAKAAVEG 305

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +K +I +G QIR+YVL PY+++KD+RT +E+T   +VL GDL++++KA L +K
Sbjct: 306 TKKKIDFGSQIRNYVLFPYKLIKDVRTGVERTDVDNVLAGDLNEYIKAYLLMK 358


>gi|86152591|ref|ZP_01070796.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85843476|gb|EAQ60686.1| peptide chain release factor 2 [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 365

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 168/353 (47%), Positives = 229/353 (64%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  +  +   +N   RL  +      P  W +V +A ++ +E+  + N +   +  
Sbjct: 13  LKNKVGNIASIIKPENIQTRLKEIEELENSPSFWSDVKQAGIIGKEKTKITNLLKNYENA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D   L +LA  E+D   L+   ++  +++  +   +   LLSGE D  +A + +H
Sbjct: 73  FNALNDASGLFDLANSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA++L RMY R+ E+  FK E L+  +GEEAG+K  + L+KG NAYG+LK
Sbjct: 133 PGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP+DS  RRHTSFSS+ V P +DD IEIEI E D RID YRASGAGGQH
Sbjct: 193 AENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A+ ML+++LYELEL K+++ AN     
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDSANT--GE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K+EIGWG QIRSYVL PYQ VKD R+    +   ++LDGD+   ++  L   K
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 363


>gi|322804442|emb|CBZ01992.1| peptide chain release factor 2 [Clostridium botulinum H04402 065]
          Length = 325

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 149/323 (46%), Positives = 217/323 (67%), Gaps = 1/323 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++P+ W ++ EA+ +  E ++L + ++    +++ + D + L E+ L E+D  + +E  
Sbjct: 1   MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEM-LSEEDDDMKKEII 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + IK E +  + E+LLSGE D N+A + +H+G GGT++QDW +ML RMYTRWAEK  
Sbjct: 60  SEYKNIKEETDRFKIETLLSGEYDRNNAIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  + +++ + E+AGIKS TL I G   YG+LK E+G+HRLVRISP+++N +R TSF+SI
Sbjct: 120 FAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASI 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + D  EIEI   D +IDTYRA GAGGQHVN T+SAVRITH+PTG++VQCQ ERSQ
Sbjct: 180 EVLPELTDDQEIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK  A  +L++KL EL+ +  +E          ++GWG QIRSYV  PY +VKD RT 
Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKERIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E ++   V++GD++ F+   L 
Sbjct: 300 AETSNVDSVMNGDINMFITQYLK 322


>gi|257054828|ref|YP_003132660.1| peptide chain release factor 2 [Saccharomonospora viridis DSM
           43017]
 gi|256584700|gb|ACU95833.1| bacterial peptide chain release factor 2 (bRF-2) [Saccharomonospora
           viridis DSM 43017]
          Length = 368

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 160/353 (45%), Positives = 223/353 (63%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L  +  + D D   + ++ L  +   P LW +   A+ +  +  H   ++  + E+
Sbjct: 12  LGGKLAQVEAVMDLDALRREVAELEEEAARPDLWNDPEVAQRVTSQLSHKQASLRKVSEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L ELA  E D + L E    L ++  +V   +  +LLSGE D  +A + + 
Sbjct: 72  RQRVDDLGVLHELAEAEGDKASLAEAEAELAQLTKDVNALEVRTLLSGEYDERNAVVTIR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ DWA MLLRMY RWAE+  + TE  +I   EEAGI+SAT  I GP  YG L 
Sbjct: 132 SEAGGVDAADWAEMLLRMYLRWAERHNYPTEIYDISYAEEAGIRSATFKISGPYLYGTLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+ +RR TSF+ + V P V++   +EI E D R+D YR+SG GGQ 
Sbjct: 192 VEQGTHRLVRISPFDNQNRRQTSFAHVEVLPEVEEIDHVEIPEKDIRVDVYRSSGPGGQS 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ E+SQ +NKA A  +L+AKL  L+ +K EE A +    
Sbjct: 252 VNTTDSAVRITHLPTGIVVSCQNEKSQLQNKASAMKVLQAKL--LQRKKEEERAELDALR 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +   WG Q+RSYVL PYQ+VKDLRT+ E  +PS VLDG+LD F++A +  +K
Sbjct: 310 DSGSSWGNQMRSYVLHPYQLVKDLRTDYEVGNPSAVLDGELDGFLEAGIRWRK 362


>gi|119715500|ref|YP_922465.1| peptide chain release factor 2 [Nocardioides sp. JS614]
 gi|119536161|gb|ABL80778.1| bacterial peptide chain release factor 2 (bRF-2) [Nocardioides sp.
           JS614]
          Length = 375

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 151/354 (42%), Positives = 214/354 (60%), Gaps = 1/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   ++ +  + D +     ++ L  +   P LW +   A  +      L   +     
Sbjct: 15  QLQATMHTIEQVLDLETMRAEIADLGEQVAAPDLWDDQDNATRVTGRLSALQGELDRFTA 74

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +Q  + D  I++E+A EE D   L E    L R+K  VE  +  +LLSGE D+ +A + +
Sbjct: 75  LQGSVDDLAIMVEMAQEEGDADALAEAEAELGRLKRSVEALEVRTLLSGEYDAREAIVTI 134

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A ML+RMYTRWAE+ K+  E  ++   EEAGIKSA   I  P AYG L
Sbjct: 135 RSGAGGVDAADFAEMLMRMYTRWAEQHKYPVEVFDVSYAEEAGIKSAEFAIHAPYAYGTL 194

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V PV++ + EIEI E+D R D +R+ G GGQ
Sbjct: 195 SVEAGTHRLVRISPFDNQGRRQTSFAAVEVVPVLEQTDEIEIDENDIRTDVFRSGGPGGQ 254

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ E+SQ +NKA A  +L+AKL   +  +   +    + 
Sbjct: 255 SVNTTDSAVRLTHIPTGIVVSCQNEKSQLQNKASAMVVLKAKLLAKKKAEEAALKKDLKG 314

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                 WG Q+R+YVL PYQMVKDLRT  E  +P  V DGD+DDF++A +  ++
Sbjct: 315 D-VAAAWGDQMRNYVLNPYQMVKDLRTGYEVGNPQSVFDGDVDDFIEAGIRWRR 367


>gi|227486641|ref|ZP_03916957.1| peptide chain release factor RF2 [Anaerococcus lactolyticus ATCC
           51172]
 gi|227235353|gb|EEI85368.1| peptide chain release factor RF2 [Anaerococcus lactolyticus ATCC
           51172]
          Length = 329

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 162/326 (49%), Positives = 218/326 (66%), Gaps = 2/326 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
            P+ W N  +A+ +M +       +    +I+D + DN  L++L    D+         +
Sbjct: 2   SPNFWDNSDKAQTVMADLSDKKEDLKAYTDIEDAIKDNKDLIDLVELSDEDESKTLEEVD 61

Query: 92  LQ--RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
               +IK  +   + ++ L+GE D N+AYL ++AGAGG E+ DWA+ML RMYTR+ EKR 
Sbjct: 62  SNLKQIKKSLASLKLKTQLNGEYDKNNAYLSINAGAGGLEATDWADMLFRMYTRYCEKRG 121

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E  ++++ E  GIKS TL +KGP AYG+LKGE+GVHRLVRISP+DS SRRHTSFSS+
Sbjct: 122 FKVEVKDLNNEEAGGIKSVTLHVKGPYAYGYLKGEKGVHRLVRISPFDSQSRRHTSFSSV 181

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V+P +D+   IEI  SD RIDTYRASGAGGQHVN TDSAVRITHIPTGVV   Q ERSQ
Sbjct: 182 DVFPELDEDTSIEIDPSDLRIDTYRASGAGGQHVNKTDSAVRITHIPTGVVATSQAERSQ 241

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A N+L +KL +++ ++++E     + S ++I WG QIRSYV QPY MVKD RTN
Sbjct: 242 MQNRETAMNLLISKLIQIKEEEKKEKIEDIQGSYSQIAWGSQIRSYVFQPYTMVKDHRTN 301

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355
            E  +   V+DGD+  F+ A LA  +
Sbjct: 302 YEMGNVEAVMDGDIQGFIDAYLAQNQ 327


>gi|118590063|ref|ZP_01547467.1| peptide chain release factor 2 [Stappia aggregata IAM 12614]
 gi|118437560|gb|EAV44197.1| peptide chain release factor 2 [Stappia aggregata IAM 12614]
          Length = 322

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 225/309 (72%), Positives = 262/309 (84%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD++IS IK ++  L DN+ L+EL   EDD S++ +  + L+ +K +V   Q  
Sbjct: 1   MRERQQLDDSISGIKSLEQDLSDNIELIELGEMEDDKSVVADAEEALRGLKGKVNQLQLN 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD+ND YLE+++GAGGTESQDWA+MLLRMY RWAEK  FK E LE HDGEEAGI
Sbjct: 61  SLLSGEADANDTYLEINSGAGGTESQDWASMLLRMYRRWAEKHGFKVEVLEYHDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSS WVYPV+DDSI+I+I+E
Sbjct: 121 KSATLLIKGENAYGWLKTESGVHRLVRISPYDSNARRHTSFSSAWVYPVIDDSIDIDINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYRASGAGGQHVNTTDSAVRITH PTG+VVQCQ ERSQHKN+A AW+ML+A+LY
Sbjct: 181 SDCRIDTYRASGAGGQHVNTTDSAVRITHQPTGIVVQCQSERSQHKNRATAWSMLKARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE A+   +SKT+IGWG QIRSYVLQPYQ+VKDLRT +E TSP DVLDGDLD+
Sbjct: 241 EAELKKREEAASAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTSPGDVLDGDLDE 300

Query: 346 FMKATLAIK 354
           FM+A LA +
Sbjct: 301 FMEAALAQR 309


>gi|32266159|ref|NP_860191.1| peptide chain release factor 2 [Helicobacter hepaticus ATCC 51449]
 gi|81666133|sp|Q7VIE6|RF2_HELHP RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|32262209|gb|AAP77257.1| peptide chain release factor 2 [Helicobacter hepaticus ATCC 51449]
          Length = 366

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 170/349 (48%), Positives = 232/349 (66%), Gaps = 3/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +   +  + +  +  ++L  +    +D H W +   A  + ++++  +  +      
Sbjct: 13  LHNKCENIAKILNPTSLQKQLKDIENLEQDEHFWNDSKRAAEVAKQKRKCERMLQTYTNT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  + D L L E+A+ E+D   L+   +    +   ++  + E +LSGE D ++A + + 
Sbjct: 73  KQEIDDALELYEIAMSEEDSRTLELLFEQAPSLLSHIQKVEIEVMLSGENDGSNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RW+E+R FK E L+  DGEEAGIK    +IKG NAYG+ K
Sbjct: 133 PGAGGTESQDWASILYRMYLRWSERRGFKVELLDYQDGEEAGIKGVAFIIKGENAYGYAK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ V P +DD I IEI + D RIDTYRASGAGGQH
Sbjct: 193 SENGVHRLVRISPFDANAKRHTSFASVQVSPELDDDINIEIEDKDIRIDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+RITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELELQK +E        
Sbjct: 253 VNKTESAIRITHFPTGIVVQCQNDRSQHKNKATAMKMLKSKLYELELQKNQE---GASQE 309

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K+EIGWG QIRSYVL PYQ VKDLRT    +  S VLDGD+D+ +++ L
Sbjct: 310 KSEIGWGHQIRSYVLAPYQQVKDLRTQFATSDTSGVLDGDIDEIIESVL 358


>gi|317008842|gb|ADU79422.1| peptide chain release factor 2 [Helicobacter pylori India7]
          Length = 363

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 243/352 (69%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+ + +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDINKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L +++ L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNALDESVELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362


>gi|74318511|ref|YP_316251.1| peptide chain release factor 1 [Thiobacillus denitrificans ATCC
           25259]
 gi|119361634|sp|Q3SG10|RF1_THIDA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|74058006|gb|AAZ98446.1| peptide chain release factor 1 [Thiobacillus denitrificans ATCC
           25259]
          Length = 360

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 122/344 (35%), Positives = 183/344 (53%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
              A +RL  L+     P +  ++   + L RE   L   +   ++ +    D     E+
Sbjct: 9   LARADERLEELDALLAQPEVAADMDSYRKLTREHAELSPVVGLYRQYKQVEADQKTAQEM 68

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +    +            Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 69  LADADMRELAEAELADGAARITELENELQTALLPRDPNDERNIFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE++++K E +    GE  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 129 GNLLRMYTRYAERQRWKVEIVSESPGEVGGYKEVIVRIVGEGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P   +  E++I+ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ETESQGRIHTSACTVAVMPEAAEVGEVDINPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+N+AQA ++L A+L + E+Q   + A+   + K+ IG G    +
Sbjct: 249 LPTGLVVECQDDRSQHRNRAQAMSVLAARLKDREIQ--AQQASEASTRKSLIGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       V+DGDL + + A  A  +
Sbjct: 307 IRTYNF-PQGRITDHRINLTLYKIDAVMDGDLGELLDALAAEHQ 349


>gi|148255578|ref|YP_001240163.1| peptide chain release factor 2 [Bradyrhizobium sp. BTAi1]
 gi|146407751|gb|ABQ36257.1| bacterial peptide chain release factor 2 (bRF-2) [Bradyrhizobium
           sp. BTAi1]
          Length = 323

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 201/309 (65%), Positives = 248/309 (80%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L+++++ I +++  L DN+ ++EL   E+D  ++ E  + L+ +K +V  ++ E
Sbjct: 1   MQERTSLEDSLTGIGKVERDLSDNIEMIELGEAENDAGVVTEAENALKALKKDVARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWA MLLRMYTRWAEK  FK E LE   GEEAGI
Sbjct: 61  ALLSGEADKFDTYLEVHAGAGGTESQDWAQMLLRMYTRWAEKHGFKIEYLEETQGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PVVDDSI+I+I E
Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVVDDSIKIDIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ +  + VLDGDLD+
Sbjct: 241 EIELKKREEKAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300

Query: 346 FMKATLAIK 354
           FM ATLA +
Sbjct: 301 FMAATLAQR 309


>gi|332673011|gb|AEE69828.1| peptide chain release factor RF2 [Helicobacter pylori 83]
          Length = 385

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 241/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 35  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 94

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L ++  L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 95  KNSLDESTELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 154

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 155 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 214

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 215 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 274

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 275 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 332

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 333 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 384


>gi|259502724|ref|ZP_05745626.1| peptide chain release factor RF2 [Lactobacillus antri DSM 16041]
 gi|259169369|gb|EEW53864.1| peptide chain release factor RF2 [Lactobacillus antri DSM 16041]
          Length = 332

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 156/325 (48%), Positives = 210/325 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +  +A+ L+ +   L         ++D+L D    LEL   E D  + QE +
Sbjct: 1   MAQPGFWDDNEKAQQLINDNNDLKEKRDTYVALRDQLADLETNLELLELEPDPDLEQEFA 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +  +    ++  +   LLS + D  +A LE+H GAGGTE+QDW  MLLRMY RWAE+  
Sbjct: 61  ASFAKTTEALQQYRLSQLLSEKYDGKNAILEIHPGAGGTEAQDWGEMLLRMYVRWAEQHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
              E      GE AG+KS TLLIKG NA+G+L+ E+GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 LTVETANYEPGEVAGVKSVTLLIKGRNAFGYLRSEKGVHRLVRISPFDSAGRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDS+E++I+ +D R+DT+R+SGAGGQH+N T+SAVRITH+PTG+V   Q ERSQ
Sbjct: 181 DVMPELDDSVEVDINPADLRVDTFRSSGAGGQHINKTESAVRITHLPTGLVASSQAERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             N+  A NML++KLYELE +K+ +     E  + EIGWG QIRSYV  PY +VKD R+ 
Sbjct: 241 LLNRQTAMNMLKSKLYELEEEKKAKERAEIEGEQLEIGWGSQIRSYVFHPYTLVKDNRSG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +   V+DG+LD F+ A L  K
Sbjct: 301 YETHNGQAVMDGELDPFINAYLQWK 325


>gi|146340475|ref|YP_001205523.1| peptide chain release factor 2 [Bradyrhizobium sp. ORS278]
 gi|146193281|emb|CAL77297.1| Peptide chain release factor 2 (RF-2) [Bradyrhizobium sp. ORS278]
          Length = 323

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 200/309 (64%), Positives = 249/309 (80%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L+++++ I +++  L DN+ ++EL   E+D  ++ E  + L+ +K EV  ++ E
Sbjct: 1   MQERTSLEDSLTGIGKVERELSDNIEMIELGEAENDAGVVAEAENALKELKKEVARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWA+MLLRMYTRWAE   FK E LE   GEEAGI
Sbjct: 61  ALLSGEADKFDTYLEVHAGAGGTESQDWASMLLRMYTRWAETHGFKVEYLEESLGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PV+DDSI+I+I E
Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDDSIKIDIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ +  S VL+GDLD+
Sbjct: 241 EIELKKREEKAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLNGDLDE 300

Query: 346 FMKATLAIK 354
           FM ATLA +
Sbjct: 301 FMAATLAQR 309


>gi|320095989|ref|ZP_08027602.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 178
           str. F0338]
 gi|319977060|gb|EFW08790.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 178
           str. F0338]
          Length = 372

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 140/364 (38%), Positives = 218/364 (59%), Gaps = 10/364 (2%)

Query: 1   MKLSRQLNCLGGLFD-------WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53
           ++ + ++  L    D        +    +++ LN K   P LW +   A+ +     H  
Sbjct: 3   IEFTEEIQSLRLTMDNVLAVVRPERLRAQIAELNEKAAAPDLWDDPARAQEVTSALSHRQ 62

Query: 54  NAISFIKEIQDRLCDNLILLEL--ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           + +  +  + +R+ D   ++E+     ++   IL E + +L  +K +V   +  +LL GE
Sbjct: 63  SELDRVVRMGERIDDLEAMVEMAGEDPDEAEEILDEAAADLDTLKKDVSDLEIRTLLDGE 122

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D  +A + + +GAGG ++ D+A +LLRMY RWAE+  + T+ ++    EEAG+KSAT  
Sbjct: 123 YDERNAVITIRSGAGGVDAADFAEILLRMYLRWAERHGYATKVMDTSYAEEAGLKSATFE 182

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           ++ P AYG L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI ES+ ++D
Sbjct: 183 VQAPYAYGTLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESTDHIEIPESELKVD 242

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            +R+SG GGQ VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L  ++
Sbjct: 243 VFRSSGPGGQSVNTTDSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVLRHEE 302

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +           +  WG Q+RSYVLQPYQMVKDLRT  E  +P  V DGD+D F+ A +
Sbjct: 303 EQAKKKELAGD-VKASWGDQMRSYVLQPYQMVKDLRTEFESGNPQAVFDGDIDGFINAGI 361

Query: 352 AIKK 355
             +K
Sbjct: 362 RWRK 365


>gi|242066770|ref|XP_002454674.1| hypothetical protein SORBIDRAFT_04g035390 [Sorghum bicolor]
 gi|241934505|gb|EES07650.1| hypothetical protein SORBIDRAFT_04g035390 [Sorghum bicolor]
          Length = 467

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 152/351 (43%), Positives = 222/351 (63%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +++ +  +     W   ++R   L    E P LW++ + A  + RE+  L   I  + ++
Sbjct: 107 VAQSVKLIKKRLKWGWILERTKQLAVVLERPDLWEDPVFAGRVSREQGELMGKIKSVNQL 166

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L +++ +L LA EE+D  +  E+   L  +++  + K+  +LLS + DS   ++EV 
Sbjct: 167 EQELIEHIEMLRLAREENDNELEMESMRALADMRISAKEKELNALLSRDNDSCSCFIEVQ 226

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA M++ MY  WA++R +    +E   GE AGIK AT+ + G  A+G+ K
Sbjct: 227 AGAGGTESMDWAAMVMNMYKSWAQRRGYTVTVVEEMPGEVAGIKRATIKVDGEYAFGYAK 286

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+DS  RRHTSF+++ V P+  D S   +I +SD RI+ +R+ G GGQ
Sbjct: 287 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDASSRYQIKDSDLRIERFRSGGPGGQ 346

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H NTT+SA+RI HIPTG+    Q ERSQH NKA A  +L+++L +LE+ ++ ++      
Sbjct: 347 HANTTESAIRIVHIPTGISATSQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNAEHTQ 406

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           S  EI WG QIRSYVL PY+MVKDLRTN E + P  VL+GDLDDF+   L+
Sbjct: 407 SLNEISWGNQIRSYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDDFILNYLS 457


>gi|260881387|ref|ZP_05404264.2| peptide chain release factor 1 [Mitsuokella multacida DSM 20544]
 gi|260849258|gb|EEX69265.1| peptide chain release factor 1 [Mitsuokella multacida DSM 20544]
          Length = 360

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 109/354 (30%), Positives = 180/354 (50%), Gaps = 12/354 (3%)

Query: 10  LGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           +  + +       +   L +   DP    ++ + +   +E   L   I+  +  ++ L  
Sbjct: 1   MKSVLEKLQAVEDKYRELESLISDPETMADMAKWQAYTKEHAALTPIITKFRRYKEVLKG 60

Query: 69  NLILLELALEEDDCSILQETSDN--LQRIKLEVEYKQF--ESLLSGEADSNDAYLEVHAG 124
                 +  E  D  +             + E   K+     L     D  +  +E+  G
Sbjct: 61  IEEAKSMLGEALDHEMHAFVESELADLMEQKEALDKELPILLLPKDPNDEKNVIVEIRGG 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
            GG E+  +A  L RMY+R+AEK+ +K E ++ +  E  G K  T ++ G  AY +LK E
Sbjct: 121 VGGEEAALFAGDLFRMYSRYAEKKGWKVELMDANATEIGGFKEVTFMVTGYGAYSYLKYE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS +++ V P   + +++ I+ +D RIDTY ASGAGGQ+VN
Sbjct: 181 SGTHRVQRVPVTESGGRIHTSAATVAVLP-EAEDVDVAINPADLRIDTYCASGAGGQYVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T++A+RITH+PTG+VVQCQ E+SQ KNK +A  +LRA++ +   Q  E+ A +    ++
Sbjct: 240 RTETAIRITHLPTGIVVQCQDEKSQLKNKEKAMKVLRARILDKARQ--EQEAAVAADRRS 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           ++G G    +IR+Y   P   V D R  +       +LDGDLD+ + A +   +
Sbjct: 298 QVGSGDRSERIRTYNF-PQGRVTDHRIGLTLHKIDAILDGDLDELLAALITADQ 350


>gi|254520266|ref|ZP_05132322.1| peptide chain release factor 2 [Clostridium sp. 7_2_43FAA]
 gi|226914015|gb|EEH99216.1| peptide chain release factor 2 [Clostridium sp. 7_2_43FAA]
          Length = 325

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 157/323 (48%), Positives = 218/323 (67%), Gaps = 1/323 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++   W+++  A+ + +E + + + I   + +  R+ D  IL EL  E+D+ SI +   
Sbjct: 1   MQENGFWEDIKRAEEVTKESKRIKDKIDRYESLVSRIEDVEILAELIDEDDEESIDE-VI 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ I+ +VE  + E LLSGE D NDA L +HAG GG+++ DW  MLLRMYTRW EKR 
Sbjct: 60  REIRSIEKDVEGYRIELLLSGEYDRNDAILTLHAGVGGSDANDWTEMLLRMYTRWCEKRG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+  +G+EAGIKS TL +KG  AYG+LK E+GVHRLVRISP+++N +R TSF+S+
Sbjct: 120 FKVETLDYLEGDEAGIKSVTLKVKGEFAYGYLKAEKGVHRLVRISPFNANGKRQTSFASV 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +    +IEI   D +IDTYRASGAGGQHVN T+SA+RITH+PTG+VVQCQ ERSQ
Sbjct: 180 EVLPELTKDQDIEIRSEDLKIDTYRASGAGGQHVNKTESAIRITHLPTGIVVQCQSERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             NK  A  ML++KL +L+ +  +E          ++GWG QIRSYV  PY MVKD RT 
Sbjct: 240 FSNKDTAMAMLKSKLIDLKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYNMVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E  + + V++G++D+F+ A L 
Sbjct: 300 EETANLNAVMNGEIDNFITAYLK 322


>gi|307720247|ref|YP_003891387.1| bacterial peptide chain release factor 2 (bRF-2) [Sulfurimonas
           autotrophica DSM 16294]
 gi|306978340|gb|ADN08375.1| bacterial peptide chain release factor 2 (bRF-2) [Sulfurimonas
           autotrophica DSM 16294]
          Length = 365

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 172/351 (49%), Positives = 236/351 (67%), Gaps = 2/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  ++  + G+ +      RL  +     D   W N   A  + +E+  L   +      
Sbjct: 13  IDMKMKNITGVVEPKKIQTRLQEIQELENDQDFWNNADYAAKIQKEKTQLQRKLDKYNTA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ + D   L ++A EEDD   L+   ++   ++ ++   + E LLSGE D+N+A L +H
Sbjct: 73  KNAVEDAKELYDMAKEEDDSESLEALYEDAPNLEKQIRDMEIEVLLSGETDANNAILSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA MLLRMY RWAE+R FK E L+   G+EAGIK  ++LIKG NAYG+LK
Sbjct: 133 PGAGGTESQDWAEMLLRMYKRWAERRGFKVEVLDYQAGDEAGIKDVSVLIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVRISP+DSN++RHTSF+S+ V P +DD I+I I + D RIDTYR+SGAGGQH
Sbjct: 193 VENGIHRLVRISPFDSNAKRHTSFASVMVSPEIDDDIDITIEDKDIRIDTYRSSGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+R+THI TGVVVQCQ +RSQHKNKA A  ML+++LYELEL++++         
Sbjct: 253 VNKTESAIRLTHIETGVVVQCQNDRSQHKNKATAMKMLKSRLYELELEEQKAKEAGIA-- 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K+EIGWG QIRSYV+QPYQ VKD R+N   ++ S +LDGD+D+ ++  L  
Sbjct: 311 KSEIGWGHQIRSYVMQPYQQVKDTRSNEAYSNVSGILDGDIDNMIEGVLIA 361


>gi|297172547|gb|ADI23517.1| protein chain release factor B [uncultured Gemmatimonadales
           bacterium HF0770_41L09]
          Length = 331

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 174/323 (53%), Positives = 222/323 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +  +AK  + E   L   +     +   + +   L+EL  EE+D  +  E +
Sbjct: 1   MVQPGFWDSQDQAKATIDESNRLKGWLDPWSSLDAGVSELTALVELLEEEEDAELDAEFT 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L  ++ ++E  +  ++L GE D  DA + +H GAGG ESQDWA ML+RMYTRW+E+R 
Sbjct: 61  RGLASVEKDLEVLEVRTMLQGEDDHRDAIVTIHPGAGGLESQDWAGMLMRMYTRWSERRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L++   EE GIKSATL IKG  AYG+LK E GVHRLVRISP+D  SRRHTSF+S+
Sbjct: 121 FGIEVLDLQLAEEGGIKSATLEIKGECAYGYLKAEGGVHRLVRISPFDQQSRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           ++YP+V+D IEI+I ESD RIDTYRASGAGGQHVN TDSAVRITH PTG+V  CQQERSQ
Sbjct: 181 FIYPLVEDGIEIDIDESDLRIDTYRASGAGGQHVNKTDSAVRITHEPTGIVATCQQERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           HKNK+ A  MLRA LY+  LQ++E    + E++KTEIG+G QIRSYV QPY MV D RT 
Sbjct: 241 HKNKSTAMKMLRAALYQHALQEQERERAVLEATKTEIGFGNQIRSYVFQPYTMVNDHRTE 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
           ++ T    V+DGDLD F++A L 
Sbjct: 301 LKITDVQGVMDGDLDPFIEAYLK 323


>gi|183602511|ref|ZP_02963876.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219683556|ref|YP_002469939.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|241190585|ref|YP_002967979.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|241195991|ref|YP_002969546.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|183218152|gb|EDT88798.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219621206|gb|ACL29363.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|240248977|gb|ACS45917.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|240250545|gb|ACS47484.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|289178324|gb|ADC85570.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bifidobacterium
           animalis subsp. lactis BB-12]
 gi|295793572|gb|ADG33107.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
           lactis V9]
          Length = 377

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 143/351 (40%), Positives = 210/351 (59%), Gaps = 1/351 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   +    D D    + + L  +   P LW +   A+ +M +     + +  +    
Sbjct: 14  RAKYESIALALDTDRLKSQEAELEQQASAPGLWDDSEHAQKVMSQLSACQSQLKHLSSAA 73

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            RL D   L+EL  EE+D   L E    ++ I+ +++  + E+L+ GE DS  A + + +
Sbjct: 74  SRLDDVATLIELGQEENDADTLHEAQTEIESIQKDLDQMEIETLMDGEYDSRSAVVTIRS 133

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGG ++ D+A MLLRMY RWAE+  +K + ++    EEAGIKSAT  I  P AYG +  
Sbjct: 134 GAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQIDAPYAYGRMSV 193

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HRLVRISP+D+  RR TSF+++ V P+V+ +  IE+ +S+ R+DTY ASG GGQ V
Sbjct: 194 EGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIEVPDSEIRVDTYCASGPGGQGV 253

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTT SAVRITH+PTG+VV  Q ERSQ +N+A A  +L+++L  L  ++  +         
Sbjct: 254 NTTYSAVRITHLPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHEEEAKKKKELAGD- 312

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD+D+F++A +  +
Sbjct: 313 IKASWGDQMRSYVLHPYQMVKDLRTGCETSQTQAVFDGDIDEFIQAGIRWR 363


>gi|325971169|ref|YP_004247360.1| peptide chain release factor 2 [Spirochaeta sp. Buddy]
 gi|324026407|gb|ADY13166.1| peptide chain release factor 2 [Spirochaeta sp. Buddy]
          Length = 367

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 158/348 (45%), Positives = 223/348 (64%), Gaps = 2/348 (0%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            +    D D  +  +  L TKT +   W +   A+ L  +   L ++    KE+ D L D
Sbjct: 18  TVWRRLDPDKMLSEIQKLETKTLEAGFWDDRKGAEQLFAQLNGLKDSYYPWKELIDSLGD 77

Query: 69  NLILLELA-LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              L+E+   E D+     +    + ++K +    + ++LL G+ D ND +L +HAGAGG
Sbjct: 78  MAELMEIYADEPDNPEEEAQIDAQITQLKEQYGQLKLKTLLDGKFDKNDCFLTIHAGAGG 137

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+ DWANML+RMY R+ E+  FK+E L++ + +E GIKSAT+ + GP ++G+LKGE GV
Sbjct: 138 NEASDWANMLMRMYLRYCERNGFKSEVLDLLE-DEGGIKSATIRVSGPYSFGYLKGEAGV 196

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVRISP+DS  RRHTSF+S++  PV+DD+IEI++   D R+DTYRA GAGGQHVN TD
Sbjct: 197 HRLVRISPFDSQKRRHTSFTSVYASPVIDDTIEIDLKPEDYRLDTYRAGGAGGQHVNKTD 256

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH  +G+VVQCQ ERSQ  NK  A+ ML+++LYE   + +E+        K EI 
Sbjct: 257 SAVRITHYESGIVVQCQNERSQVMNKDVAFKMLKSRLYEYYRELKEKEHQKDAIEKKEIT 316

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           WG QIRSYV QPY MVKD RT++   +   V+DG++ DF++  L   +
Sbjct: 317 WGSQIRSYVFQPYTMVKDHRTSVTVGNIQAVMDGEIGDFIEGYLQWAQ 364


>gi|313204692|ref|YP_004043349.1| bacterial peptide chain release factor 2 (brf-2) [Paludibacter
           propionicigenes WB4]
 gi|312444008|gb|ADQ80364.1| bacterial peptide chain release factor 2 (bRF-2) [Paludibacter
           propionicigenes WB4]
          Length = 368

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 131/356 (36%), Positives = 213/356 (59%), Gaps = 11/356 (3%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
            + + L    D D  + ++     +T+ P  W +   A+  MR+ + L N ++    ++ 
Sbjct: 12  ERESALRRYLDVDTKLIQIEEEELRTQVPGFWDDAKAAEAQMRKVKELKNWVTGYNAVKT 71

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              +  +  +     ++    +E  +  +     +E  + +++LS E D   A +++  G
Sbjct: 72  AADELQLAFDFYK--EEAVSEEEVDEAYRHAMELLENIEMKNMLSHEEDKLGAVIKIVGG 129

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGGTE+QDWA+ML RMY RW E++ +  E   + +G+EAGIK+ T+ I+G  AYG+LK E
Sbjct: 130 AGGTEAQDWASMLFRMYQRWCERQGYACEITNLQEGDEAGIKTVTMQIEGEMAYGYLKSE 189

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHRLVR+SP+++  +R TSF+S++V P+VDD+IEIE++      DT+R+SGAGGQ+VN
Sbjct: 190 NGVHRLVRVSPFNAQGKRMTSFTSVYVVPLVDDTIEIEVNPGMLSWDTFRSSGAGGQNVN 249

Query: 245 TTDSAVRITH--------IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
             ++ VR+ +         P  +V++  + RSQ  NK  A  +L+++LYELEL+KR    
Sbjct: 250 KVETGVRLHYKFVNPVTNQPDEIVIENTESRSQFGNKDNAIRLLKSQLYELELEKRRAAT 309

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            + E+ K +I WG QIRSYV    + VKD RTN + ++ + V+DGD+D F+KA L 
Sbjct: 310 AVVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSNVNGVMDGDIDAFIKAYLM 364


>gi|284046044|ref|YP_003396384.1| peptide chain release factor 2 [Conexibacter woesei DSM 14684]
 gi|283950265|gb|ADB53009.1| peptide chain release factor 2 [Conexibacter woesei DSM 14684]
          Length = 372

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 163/349 (46%), Positives = 215/349 (61%), Gaps = 2/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  QL  L    D       ++ L  +   P  W +  +A     E       +   + +
Sbjct: 20  IREQLTLLADYVDPKALEAHVAELEQEMGAPGFWDSQEKAAKTSAEHARASRKLDTYRTL 79

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + D   L E+   ++D  +  E ++ +   +  +E  + E L SG  D  DA + V+
Sbjct: 80  VSDVEDLEPLAEM--AQEDPELEAELAEQIASAERRLEQLEEERLFSGRYDGGDALVTVN 137

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGT++QDWA M+LRM  RWAEKR F  E LE+  GEEAGIKSAT  +KG NAYG   
Sbjct: 138 AGAGGTDAQDWAEMVLRMEMRWAEKRGFDVELLEVSAGEEAGIKSATFRVKGENAYGLYG 197

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVR+SP+DS +RR TSF+ + V PVV+D+ E+EI + D ++DTYRASGAGGQH
Sbjct: 198 AEKGVHRLVRLSPFDSANRRQTSFAGVEVAPVVEDAAEVEIDDDDLQVDTYRASGAGGQH 257

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVRITH P+G+VVQCQ ERSQ  N+A A  MLR+KL ELE ++R+E     +  
Sbjct: 258 VNKTDSAVRITHRPSGIVVQCQNERSQSSNRATAMAMLRSKLVELEERRRQEEIAKEKGE 317

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             ++ +G QIRSYVL PY MVKD RT  E      VLDGDLD F++A L
Sbjct: 318 AQDVNFGSQIRSYVLHPYSMVKDHRTEFEIGDTGRVLDGDLDGFVRAYL 366


>gi|169794367|ref|YP_001712160.1| peptide chain release factor 2 [Acinetobacter baumannii AYE]
 gi|184159830|ref|YP_001848169.1| protein chain release factor B [Acinetobacter baumannii ACICU]
 gi|213159055|ref|YP_002321053.1| peptide chain release factor 2 [Acinetobacter baumannii AB0057]
 gi|215481924|ref|YP_002324106.1| peptide chain release factor 2 [Acinetobacter baumannii AB307-0294]
 gi|239503845|ref|ZP_04663155.1| peptide chain release factor 2 [Acinetobacter baumannii AB900]
 gi|260557921|ref|ZP_05830134.1| peptide chain release factor 2 [Acinetobacter baumannii ATCC 19606]
 gi|332854818|ref|ZP_08435581.1| peptide chain release factor 2 [Acinetobacter baumannii 6013150]
 gi|332868948|ref|ZP_08438507.1| peptide chain release factor 2 [Acinetobacter baumannii 6013113]
 gi|332872826|ref|ZP_08440791.1| peptide chain release factor 2 [Acinetobacter baumannii 6014059]
 gi|169147294|emb|CAM85155.1| peptide chain release factor 2 [Acinetobacter baumannii AYE]
 gi|183211424|gb|ACC58822.1| Protein chain release factor B [Acinetobacter baumannii ACICU]
 gi|213058215|gb|ACJ43117.1| peptide chain release factor 2 [Acinetobacter baumannii AB0057]
 gi|213988530|gb|ACJ58829.1| peptide chain release factor 2 [Acinetobacter baumannii AB307-0294]
 gi|260408712|gb|EEX02017.1| peptide chain release factor 2 [Acinetobacter baumannii ATCC 19606]
 gi|322509742|gb|ADX05196.1| Peptide chain release factor 2 [Acinetobacter baumannii 1656-2]
 gi|323519757|gb|ADX94138.1| protein chain release factor B [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332727820|gb|EGJ59224.1| peptide chain release factor 2 [Acinetobacter baumannii 6013150]
 gi|332732991|gb|EGJ64193.1| peptide chain release factor 2 [Acinetobacter baumannii 6013113]
 gi|332738987|gb|EGJ69849.1| peptide chain release factor 2 [Acinetobacter baumannii 6014059]
          Length = 310

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 170/307 (55%), Positives = 224/307 (72%), Gaps = 1/307 (0%)

Query: 47  RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
           +E+  L+N I+ +  +  +L D   +L+LA+E DD S+L++    L   + E+   +F  
Sbjct: 3   KEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELSTAEEELAKLEFRR 62

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S   D N  Y+E+ AG+GGTE+QDWA+MLLRMY RW E+  FK E +E+ DG+ AGIK
Sbjct: 63  MFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAGIK 122

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+ S
Sbjct: 123 SATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDINPS 182

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R DTYRASGAGGQH+N TDSAVR+THIPTG+VV CQ +RSQH N+  AW  LRAKLYE
Sbjct: 183 DVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQLRAKLYE 242

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LE+QKR E A   E SK++IGWG QIRSYVL     +KDLRT +E ++   VLDGDLD F
Sbjct: 243 LEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDD-SRIKDLRTGVENSNTGAVLDGDLDRF 301

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 302 IEASLKQ 308


>gi|20806672|ref|NP_621843.1| peptide chain release factor 1 [Thermoanaerobacter tengcongensis
           MB4]
 gi|22096035|sp|Q8RD98|RF1_THETN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|20515122|gb|AAM23447.1| Protein chain release factor A [Thermoanaerobacter tengcongensis
           MB4]
          Length = 356

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 122/346 (35%), Positives = 191/346 (55%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72
                 R   L+ K  DP++  NV E +  ++E   +++ +   +E +  L +      L
Sbjct: 5   LQAIEDRYVELSQKISDPNVISNVEEWRKYVKEHAAIEDIVLKYREYKKVLEEIKATEEL 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L    EE      +E S   ++ +  +E  +   L     D  +  +E+ AGAGG E+  
Sbjct: 65  LSSQDEELKEMAEEELSQLEEKKEKLMEEIKILLLPKDPNDEKNVIMEIRAGAGGEEAAL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMYT +AEK+ +K E +  +  +  G K     I G  AY  LK E GVHR+ R
Sbjct: 125 FAYDLFRMYTMYAEKKGWKVEIMSANKTDIGGFKEVIFSISGKGAYSRLKYESGVHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           I   ++  R HTS +++ V P   + +++EI+ +D +ID +R+SG GGQ VNTTDSAVR+
Sbjct: 185 IPTTEAGGRIHTSTATVAVLP-EAEEVDVEINPNDIKIDVFRSSGHGGQSVNTTDSAVRV 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV CQ ERSQ +N+ +A  +LRAKLYE+ L++++    I E+ K+++G G   
Sbjct: 244 THIPTGIVVTCQDERSQIQNRERALKILRAKLYEMALKEQQ--REIAEARKSQVGTGERS 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +      +VLDG+LD+ + A +   +
Sbjct: 302 ERIRTYNF-PQGRVTDHRIGLTLYKLQEVLDGELDEIIDALILNDQ 346


>gi|33864328|ref|NP_895888.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9313]
 gi|33641108|emb|CAE22237.1| peptide-chain-release factor RF-2 [Prochlorococcus marinus str. MIT
           9313]
          Length = 375

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 148/352 (42%), Positives = 208/352 (59%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ +L       D      R   L      P  W +   A+  MR+   +   ++ I  
Sbjct: 13  ELTDRLGQAQDCLDVPALNARQQDLEQLAAQPDFWNDQQNAQKQMRQLDEVKAQLTQITL 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            +  + D    LEL   E D  +L E    L++++  ++  + E LLSGE D   A L +
Sbjct: 73  WRSAVNDAQATLELYDLEPDDEMLSEAQSGLKQLRQGLDRWELERLLSGEYDKEGAVLSI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGT++QDWA MLLRMYTRWAE         E+ +GEEAGIKSAT+ I+G  AYG+L
Sbjct: 133 NAGAGGTDAQDWAQMLLRMYTRWAEDHDMTVTVDELSEGEEAGIKSATVEIEGRYAYGYL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E+G HRLVRISP+++N +R TSF+ + + P +D  +E++I E D  + T R+ GAGGQ
Sbjct: 193 RNEKGTHRLVRISPFNANGKRQTSFAGVEIMPKIDQEVELDIPEKDLEVTTSRSGGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++AVRI HIPTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R         
Sbjct: 253 NVNKVETAVRILHIPTGLAVRCTQERSQLQNKEKALALLKAKLMVIAQEQRAAEIADIRG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
              E  WG QIR+YV  PYQMVKDLRT  E T    V++GDLD F++  L  
Sbjct: 313 DIVEAAWGNQIRNYVFHPYQMVKDLRTAEETTDVQAVMNGDLDRFIQTLLRQ 364


>gi|312142853|ref|YP_003994299.1| peptide chain release factor 2 [Halanaerobium sp. 'sapolanicus']
 gi|311903504|gb|ADQ13945.1| peptide chain release factor 2 [Halanaerobium sp. 'sapolanicus']
          Length = 346

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 158/342 (46%), Positives = 219/342 (64%), Gaps = 1/342 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
            FD D      + +  +      W +   A+   +    L   +  I E++++  +   +
Sbjct: 3   YFDKDELESEKAAIEKEMAQSGFWDDKENARHKSQRLDKLKKRLKVISELEEKFDEI-EI 61

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +    E+  ++ +E   +  +++ +++  + +  L+   D ++A L +H GAGGTESQD
Sbjct: 62  YQQLAAEEGENLREELEQSFSQLEKKLDNLELKLRLNEPYDDHNAILSIHPGAGGTESQD 121

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA MLLRMY RWAE   ++ E LE   G+EAG+KS TLLI G  A+G+LKGE+GVHRLVR
Sbjct: 122 WAEMLLRMYRRWAESSGYQLETLEFSAGDEAGVKSVTLLISGDYAFGYLKGERGVHRLVR 181

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           ISP+DS+ RRHTSF+S+ V P +DD +E++I E+D RI+TYRASGAGGQHVN TDSAVRI
Sbjct: 182 ISPFDSSGRRHTSFASVDVLPELDDELEVDIDENDLRIETYRASGAGGQHVNKTDSAVRI 241

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH PTGVVVQCQ +RSQHKNK  A  +L +KL EL+ + + E          EI WG QI
Sbjct: 242 THQPTGVVVQCQSQRSQHKNKNVAMKILSSKLLELKEEAQAEKIEDLRGEHKEIAWGSQI 301

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           RSYVL PY M+KD RT+ E+ +   VLDG LD+F++  L  K
Sbjct: 302 RSYVLHPYNMIKDHRTDFEEGNVDKVLDGYLDEFIEEYLKYK 343


>gi|295982099|pdb|2X9R|Y Chain Y, Structure Of The 70s Ribosome Bound To Release Factor 2
           And A Substrate Analog Provides Insights Into Catalysis
           Of Peptide Release
 gi|295982158|pdb|2X9T|Y Chain Y, Structure Of The 70s Ribosome Bound To Release Factor 2
           And A Substrate Analog Provides Insights Into Catalysis
           Of Peptide Release
          Length = 351

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 153/352 (43%), Positives = 208/352 (59%), Gaps = 5/352 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+++L  L G  D      RL  L  + EDP LW +   A+ + +E   L   +   + +
Sbjct: 1   LAQRLEGLRGYLDIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRSL 60

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L   L L+E    E+  +        L+    +++    ++LL+      +A L + 
Sbjct: 61  ESDLQGLLELMEELPAEEREA----LKPELEEAAKKLDELYHQTLLNFPHAEKNAILTIQ 116

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTE+ DWA MLLRMYTR+AE++ F+ E +++  G EAGI  A +L+KG NAYG L 
Sbjct: 117 PGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLLS 176

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+D++ RRHTSF+ + V P VD+ +E+ +   + RID  RASG GGQ 
Sbjct: 177 PEAGVHRLVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQG 236

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+ H+PTG+ V CQ  RSQ KNK  A  +L+A+LYELE +KREE        
Sbjct: 237 VNTTDSAVRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRGE 296

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              I WG QIRSYVL     VKD RT + +  P +VLDGDL D + A L  K
Sbjct: 297 VRPIEWGSQIRSYVLDK-NYVKDHRTGLMRHDPENVLDGDLMDLIWAGLEWK 347


>gi|260550208|ref|ZP_05824421.1| peptide chain release factor 2 [Acinetobacter sp. RUH2624]
 gi|260406736|gb|EEX00216.1| peptide chain release factor 2 [Acinetobacter sp. RUH2624]
          Length = 310

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 169/307 (55%), Positives = 223/307 (72%), Gaps = 1/307 (0%)

Query: 47  RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
           +E+  L+N I+ +  +  +L D   +L+LA+E DD S+L +    L   + E+   +F  
Sbjct: 3   KEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLVDVQSELGTAEEELAKLEFRR 62

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S   D N  Y+E+ AG+GGTE+QDWA+MLLRMY RW E+  FK E +E+ DG+ AGIK
Sbjct: 63  MFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAGIK 122

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+ S
Sbjct: 123 SATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDINPS 182

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R DTYRASGAGGQH+N TDSAVR+THIP+G+VV CQ +RSQH N+  AW  LRAKLYE
Sbjct: 183 DVRTDTYRASGAGGQHINKTDSAVRLTHIPSGIVVACQNQRSQHANRDHAWKQLRAKLYE 242

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LE+QKR E A   E SK++IGWG QIRSYVL     +KDLRT +E ++   VLDGDLD F
Sbjct: 243 LEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDD-SRIKDLRTGVENSNTGAVLDGDLDRF 301

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 302 IEASLKQ 308


>gi|209527406|ref|ZP_03275912.1| peptide chain release factor 2 [Arthrospira maxima CS-328]
 gi|209492141|gb|EDZ92490.1| peptide chain release factor 2 [Arthrospira maxima CS-328]
          Length = 339

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 143/329 (43%), Positives = 211/329 (64%), Gaps = 1/329 (0%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
                 P+ W +  +A+  ++    L + +   ++ +  L D   + EL   EDD S+ Q
Sbjct: 2   EQLAAQPNFWDDQTQAQKTLQTLSDLKSVLQQQQDWRKTLEDTGAIAELLELEDDESLRQ 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E   N+  +  +++  + + LLSG  D + A L ++AGAGGT++QDWA MLLRMYTRW E
Sbjct: 62  EAESNVVHLGRDIDRWELQQLLSGPYDRSGAVLTINAGAGGTDAQDWAEMLLRMYTRWGE 121

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            + +K    EI +G+EAGIKSATL ++GP AYG+LK E+G HRLVRISP+++N +R TSF
Sbjct: 122 AQGYKVHLAEISEGDEAGIKSATLEMEGPYAYGYLKAEKGTHRLVRISPFNANGKRQTSF 181

Query: 207 SSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           + + + P+  + +I ++I E D  I T RA G GGQ+VN  ++AVRI HIPTG+ V+C Q
Sbjct: 182 AGVEIMPILDEGAINLDIPEKDLEITTSRAGGKGGQNVNKVETAVRIVHIPTGIAVRCTQ 241

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQ +N+ +A  +L+AKL  +  ++R +          E  WG QIR+YV  PYQMVKD
Sbjct: 242 ERSQLQNREKAMALLKAKLLVVAQEQRAQAIAEIRGDLVEAAWGNQIRNYVFHPYQMVKD 301

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           LRT  E T+ +DV++G+LD F++A L  +
Sbjct: 302 LRTGEETTAINDVMNGELDGFIQAYLRQE 330


>gi|149196339|ref|ZP_01873394.1| peptide chain release factor RF-2 [Lentisphaera araneosa HTCC2155]
 gi|149140600|gb|EDM28998.1| peptide chain release factor RF-2 [Lentisphaera araneosa HTCC2155]
          Length = 332

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 161/324 (49%), Positives = 213/324 (65%), Gaps = 2/324 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
                 W +   AK  +     L + +   KE++ R+ D + L EL  EE   S L + +
Sbjct: 1   MGSSSFWDDSNAAKSTVDRVSALKSVVVPYKELEARVEDFITLSELIEEEGASSELMDDA 60

Query: 90  DNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
                  +  ++  +  S LSG+ DS   +L ++AGAGGTES DWA+MLLRMY RWAE +
Sbjct: 61  GEESPELEKALDDLELLSFLSGKYDSGSCFLSINAGAGGTESCDWADMLLRMYRRWAESK 120

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK   + I +GEEAGIK+ T+ I+GP A+G+LK E+GVHRLVR+SP+DSN RRHTSF+S
Sbjct: 121 GFKVTFVSILEGEEAGIKNCTMFIEGPMAFGYLKAERGVHRLVRVSPFDSNKRRHTSFTS 180

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           I V P + D  E++I   D R+DT+RASGAGGQHVNTTDSA+R+TH+PTG+VV CQ ERS
Sbjct: 181 IDVVPDIGDEAEVDIDAKDLRVDTFRASGAGGQHVNTTDSAIRLTHLPTGIVVSCQMERS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QHKN+A A  ML AKL EL+  +RE   +     K +IGWG QIRSYVL   + VKD RT
Sbjct: 241 QHKNRATAMKMLGAKLEELKQAEREAELDANAGEKNDIGWGSQIRSYVLDD-RRVKDHRT 299

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
           N   ++   VLDGD+D F+++ L 
Sbjct: 300 NHSTSNTDKVLDGDIDPFIQSFLR 323


>gi|166032746|ref|ZP_02235575.1| hypothetical protein DORFOR_02461 [Dorea formicigenerans ATCC
           27755]
 gi|166027103|gb|EDR45860.1| hypothetical protein DORFOR_02461 [Dorea formicigenerans ATCC
           27755]
          Length = 376

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 121/351 (34%), Positives = 192/351 (54%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + RL  + ++ ++P +  +    + LM+E+  L   +   KE +    +   
Sbjct: 21  MFDKLEDLLIRLEEILSELQEPDVASDPNRFRKLMKEQSELTPIVEAYKEYKACKQNIEE 80

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
            LEL  EE D  + +   + L   K  VE  + E           D  +  +E+ AGAGG
Sbjct: 81  SLELLNEESDEDMRELAKEELNESKARVEELEHELKILLLPKDPNDDKNVVVEIRAGAGG 140

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE +++K E +E  +    G+K+ T +I G  AY  +K E GV
Sbjct: 141 DEAALFAAEIYRMYLHYAESKRWKVELVECEEIGIGGMKNVTFMIDGQGAYSMMKYESGV 200

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + +++ I E D RID  RASG GGQ VNTTD
Sbjct: 201 HRVQRVPETESGGRIHTSTITVAVMP-EAEDVDVHIDEKDIRIDVMRASGNGGQCVNTTD 259

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LRAKLY+LE QK+ +     E+ K++IG
Sbjct: 260 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFALLRAKLYDLECQKQHD--AEAEARKSQIG 317

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++GD+ + + A +A  +
Sbjct: 318 TGDRSEKIRTYNF-PQGRVTDHRIGLTLYKLDKIMNGDIQEIIDACIAADQ 367


>gi|289432457|ref|YP_003462330.1| hypothetical protein DehalGT_0507 [Dehalococcoides sp. GT]
 gi|288946177|gb|ADC73874.1| hypothetical protein DehalGT_0507 [Dehalococcoides sp. GT]
          Length = 361

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 146/352 (41%), Positives = 210/352 (59%), Gaps = 2/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  ++       D       ++ L T + +P  WQ+   A+  M++           + 
Sbjct: 7   ELKGRIFSDMVRLDVSAKELEITELETASSNPDFWQDQQNAQKAMKKLAANKRTSELWRG 66

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ R+ D   L  L    +D S+  E    +  +  E++  +     SG+ D+ +A L V
Sbjct: 67  LERRINDLTELAVL--SREDPSLSNEIEHEISGLTAELDSLEVGLAFSGQYDNRNALLTV 124

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGG ESQDWA MLLRM+ RWA K+ F  E L+   GEEAGIKSATL I+G  AYG+L
Sbjct: 125 HAGAGGVESQDWAGMLLRMFMRWAAKKGFGMEILDQSLGEEAGIKSATLQIEGEYAYGFL 184

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRL+R+SP+D++  RHTSF+ + + P  +DS++I+I   D +ID +R+SG GGQ
Sbjct: 185 KSEHGVHRLIRLSPFDADHARHTSFALVEIMPEAEDSVDIDIKPEDIKIDMFRSSGPGGQ 244

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +V    +AVR+THIP+G+VV  Q ERSQH+N+  A  +L +KL  +E+ KR E     + 
Sbjct: 245 NVQKVSTAVRVTHIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKLKG 304

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            +    WG QIRSYVL PY+MVKD RT+ E  +   VL+G+LD F+ A L  
Sbjct: 305 ERISAEWGSQIRSYVLHPYKMVKDHRTDYEVGNAEAVLEGELDGFISAYLRQ 356


>gi|225568388|ref|ZP_03777413.1| hypothetical protein CLOHYLEM_04465 [Clostridium hylemonae DSM
           15053]
 gi|225162616|gb|EEG75235.1| hypothetical protein CLOHYLEM_04465 [Clostridium hylemonae DSM
           15053]
          Length = 357

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 123/351 (35%), Positives = 191/351 (54%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + R   L ++ ++P +  N    + LM+E+  L   +   KE +        
Sbjct: 1   MFDKLEDLLIRYEELMSELQEPDVVNNQERFRRLMKEQNDLAPIVEAYKEYKACRQAIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   D L   K  VE  + E           D  +  +E+ AGAGG
Sbjct: 61  SLLMLEEESDEEMRELAKDELNESKARVEELEHELKILLLPKDPNDDKNVMVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE R++KTE + I +    G K    +I G  AY  LK E GV
Sbjct: 121 DEAALFAAEIYRMYVHYAEGRRWKTEIISISENGIGGFKEVVFMITGQGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ + P   + +++ I E D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTVTVAIMP-EAEEVDVVIDEKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLY+LE++K++  A+  E+ +++IG
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLEMEKKQ--ASEAEARRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       VL+GDLD+ + + +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSVLNGDLDEVIDSLIAADQ 347


>gi|15611227|ref|NP_222878.1| peptide chain release factor 2 [Helicobacter pylori J99]
 gi|7388058|sp|Q9ZMR1|RF2_HELPJ RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|4154673|gb|AAD05740.1| PEPTIDE CHAIN RELEASE FACTOR 2 (RF-2) [Helicobacter pylori J99]
          Length = 363

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 243/352 (69%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   +++
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKM 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L +++ L ELA  + D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESVELFELAQNDSDEVTLSLLYEEAPTLEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE++ FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERKSFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362


>gi|262377202|ref|ZP_06070427.1| peptide chain release factor 2 [Acinetobacter lwoffii SH145]
 gi|262307940|gb|EEY89078.1| peptide chain release factor 2 [Acinetobacter lwoffii SH145]
          Length = 310

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 170/307 (55%), Positives = 221/307 (71%), Gaps = 1/307 (0%)

Query: 47  RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
           +E+  L+N ++ +  +  +L D   LL+LA+E DD S+L++    L   + E+   +F  
Sbjct: 3   KEKGELENVLNVLDRLSTQLEDAQALLDLAVEADDESLLEDVQAELSTAEEELAKLEFRR 62

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + +   D N  YLE+ AG+GGTE+QDWA+MLLRMY RW E+  FK E +E  DG+ AGIK
Sbjct: 63  MFNNPMDPNPCYLEIQAGSGGTEAQDWASMLLRMYLRWIERHGFKAEVMEESDGDVAGIK 122

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS+++V P VDD+IEIEI+ S
Sbjct: 123 SATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFVSPEVDDNIEIEINPS 182

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R DTYRASGAGGQH+N TDSAVR+TH PTG+VV CQ +RSQH N+  AW  LRAKLYE
Sbjct: 183 DVRTDTYRASGAGGQHINKTDSAVRLTHAPTGIVVACQNQRSQHANRDHAWKQLRAKLYE 242

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LE+ KR E A   E SK++IGWG QIRSYVL     +KDLRT +E ++   VLDGDLD F
Sbjct: 243 LEMSKRNEAAQALEDSKSDIGWGSQIRSYVLDD-SRIKDLRTGVENSNTGAVLDGDLDKF 301

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 302 IEASLKQ 308


>gi|153809900|ref|ZP_01962568.1| hypothetical protein RUMOBE_00281 [Ruminococcus obeum ATCC 29174]
 gi|149834078|gb|EDM89158.1| hypothetical protein RUMOBE_00281 [Ruminococcus obeum ATCC 29174]
          Length = 359

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 121/351 (34%), Positives = 191/351 (54%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + R   +  +  +P +  N    + LM+E+  L   +   KE +D       
Sbjct: 1   MFDKLEDLLVRFEEVLNELGEPGVTDNQERFQKLMKEQSELQPIVDAYKEYKDNKETIQD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   + L   K       +  +   L     DS +  +E+ AGAGG
Sbjct: 61  SLSMLEEEKDEEMREMLKEELSDAKKRVEELEKELKILLLPKDPNDSKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY ++AE R++KTE + +++    G K  T +I+G  AY  LK E GV
Sbjct: 121 DEAALFAAEIYRMYVKYAESRRWKTEMMSLNENGIGGFKEVTFMIQGQGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ + P   + I+  +  +DC+ D +RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTCTVAIMP-EAEEIDFHLDMNDCKFDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+ CQ E+SQ KNK +A  +LR++LYE+EL K+ +     E+ +++IG
Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYEMELAKQHD--AEAEARRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       VL GDLD+ + + +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHRLDAVLGGDLDEILDSLIAADQ 347


>gi|298369801|ref|ZP_06981117.1| peptide chain release factor 1 [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298281261|gb|EFI22750.1| peptide chain release factor 1 [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 358

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 122/349 (34%), Positives = 176/349 (50%), Gaps = 8/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +       RL  +      P    ++   + L RE   L   +   +  Q    D  
Sbjct: 4   SILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQSDLA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E+  + +      E  +  +          Q   L     D  + ++EV AG GG E
Sbjct: 64  DAEEMLSDPEMKDFAAEEIEAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR
Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G
Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V+DGDL++   A +A  +
Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQ 349


>gi|261378877|ref|ZP_05983450.1| peptide chain release factor 1 [Neisseria cinerea ATCC 14685]
 gi|269144693|gb|EEZ71111.1| peptide chain release factor 1 [Neisseria cinerea ATCC 14685]
          Length = 358

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 122/349 (34%), Positives = 176/349 (50%), Gaps = 8/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +       RL  +      P    ++   + L RE   L   +   +  Q    D  
Sbjct: 4   SILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQSDLA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E+  + +      E  +  +          Q   L     D  + ++EV AG GG E
Sbjct: 64  DAEEMLSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEVRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR
Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G
Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V+DGDL++   A +A  +
Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQ 349


>gi|109946962|ref|YP_664190.1| peptide chain release factor 2 [Helicobacter acinonychis str.
           Sheeba]
 gi|123066315|sp|Q17YT5|RF2_HELAH RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|109714183|emb|CAJ99191.1| peptide chain release factor RF-2 [Helicobacter acinonychis str.
           Sheeba]
          Length = 363

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 244/352 (69%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q+L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKVKQKLERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L +++ L E+A  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNALDESVELFEIAQNDNDEVTLSLLYEEAPILEHGVQKVEIEIMLSGEHDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NESGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSTAKN--EE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362


>gi|289423341|ref|ZP_06425149.1| peptide chain release factor 2 [Peptostreptococcus anaerobius
           653-L]
 gi|289156272|gb|EFD04929.1| peptide chain release factor 2 [Peptostreptococcus anaerobius
           653-L]
          Length = 350

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 167/346 (48%), Positives = 227/346 (65%), Gaps = 4/346 (1%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           LFD D+   R + +N   ED   W++   A  +++E + L + I     +  +L D  +L
Sbjct: 3   LFDLDSLKTRQADINASMEDQGFWEDSDHANRILQENKQLTSKIEDYDSLVGQLEDISVL 62

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGT 128
           +E+A E  D    +   D L     +V  K      E L SGE DSN+A L +++G GG 
Sbjct: 63  IEMAEETSDSEEDKTIEDQLVAYISDVNEKIVNTTMELLFSGEYDSNNAILSINSGTGGL 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ++QDWA MLLRMY RW+E R  K + L+I    EAGIK+A+L++ G NAYG+LK E+GVH
Sbjct: 123 DAQDWAQMLLRMYIRWSEGRGLKVKLLDIISDPEAGIKTASLMVSGVNAYGYLKSEKGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVRISP+DS+ +RHTSF+S+ V P ++D  +I I+ +D +IDTYR+SGAGGQHVNTTDS
Sbjct: 183 RLVRISPFDSSGKRHTSFASVDVLPEIEDDSDININPNDLKIDTYRSSGAGGQHVNTTDS 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VVQCQ ERSQ  NK  A  ML +KL +++ ++ +E     +   T+I W
Sbjct: 243 AVRITHLPTGIVVQCQNERSQRINKDVAMKMLISKLIQIKEEENKEKIEDLQGKYTQISW 302

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           G QIRSYV QPY++VKD RTN E T+   V+DG LDDFM   L  +
Sbjct: 303 GSQIRSYVFQPYKLVKDHRTNKENTNVDAVMDGSLDDFMFEYLKKQ 348


>gi|241888662|ref|ZP_04775969.1| peptide chain release factor 2 [Gemella haemolysans ATCC 10379]
 gi|241864685|gb|EER69060.1| peptide chain release factor 2 [Gemella haemolysans ATCC 10379]
          Length = 372

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 156/351 (44%), Positives = 224/351 (63%), Gaps = 1/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++++++         ++  +R++ +     +   W +   A +L+ E + +   +    E
Sbjct: 12  EINKRITEFKTSLKIEDKTERVAEIENMMLEADFWNDSEAASLLVTESKSIKKELDEFSE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + D L  +  ++E   +EDD  I Q+  + +  +K  VE   F  L S E D+N A LE+
Sbjct: 72  MIDYLEHSEEMVEFLKDEDDEEIYQDLLETVVNLKNSVEDFSFRLLFSEEYDNNTAILEI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGT++ DW+ ++LRMY R+  K+  K   L    G+  G+KSAT+ I+G  AYG L
Sbjct: 132 HAGAGGTDATDWSELMLRMYERFFTKQGLKYSYLNYQSGDITGVKSATIKIEGDFAYGLL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGG 240
           KGE+GVHR+VRISP+D + +RHTSF+SI V P   DD I IEI+  D +IDTYRA GAGG
Sbjct: 192 KGEKGVHRVVRISPFDPSGKRHTSFASIDVIPEFNDDEINIEINNEDLKIDTYRAQGAGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QH+NTTDSAVRITH+PTG+VVQ Q ERSQ KNK  A   L++KLY+LE++++E+      
Sbjct: 252 QHINTTDSAVRITHLPTGIVVQSQAERSQIKNKDAAMKNLKSKLYQLEIEEKEKELAAIR 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             + +IGWG QIRSYV  PY MVKD RTN E ++   V+DG++ DF+ A L
Sbjct: 312 GEQKDIGWGSQIRSYVFTPYTMVKDHRTNYEVSTVDKVMDGEIIDFIDAYL 362


>gi|189499218|ref|YP_001958688.1| peptide chain release factor 2 [Chlorobium phaeobacteroides BS1]
 gi|189494659|gb|ACE03207.1| peptide chain release factor 2 [Chlorobium phaeobacteroides BS1]
          Length = 363

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 154/349 (44%), Positives = 227/349 (65%), Gaps = 1/349 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           +  LN  GG+FD D  + ++  L   T + + W+N  EA  +++E             ++
Sbjct: 12  TTALNSYGGIFDVDERLHKIGELEQITTEENFWENQQEANKIVKEINDHKLWTEGFLALE 71

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            +  D    LE+A E  + S+ +E    +  I+ ++   +F+++LSG+ D  +A L ++A
Sbjct: 72  KQTADLREELEIAEELGEESLAEEIDSRIGSIEQKIAEIEFKNMLSGKDDPGNALLTINA 131

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDWA ML RMY RWAE++ FK    +  +G+ AGIK+ATL I+GP AYG+LK 
Sbjct: 132 GAGGTEAQDWAEMLYRMYLRWAERKGFKIFTDDYQEGDGAGIKTATLEIQGPYAYGYLKA 191

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SP+DSN+RRHTSF+S++ YP      EIEI + D  + T+R+ G GGQ+V
Sbjct: 192 ENGVHRLVRVSPFDSNARRHTSFASVYSYPEAPPDAEIEIRKEDLELSTFRSGGKGGQNV 251

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N  ++AVRI HIP+G+VV CQQERSQ +N+ +A  MLRA+LY+ + ++ E      E +K
Sbjct: 252 NKVETAVRIKHIPSGIVVSCQQERSQFQNRERATKMLRAQLYKKQREEEEARKQAVEGTK 311

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +I WG QIRSYV+   + +KD RTN E+    +VLDGD+DDF++  L+
Sbjct: 312 KKIEWGSQIRSYVMDD-RRIKDHRTNYERHDIENVLDGDIDDFIEKYLS 359


>gi|241664381|ref|YP_002982741.1| peptide chain release factor 1 [Ralstonia pickettii 12D]
 gi|240866408|gb|ACS64069.1| peptide chain release factor 1 [Ralstonia pickettii 12D]
          Length = 360

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 183/344 (53%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R+  +N          N+ + + L RE   L+  ++     +    D     EL
Sbjct: 9   LDQLAERIVEINALLAREDATANLDQYRKLTREHAELEPVVAQFAAWKRAEEDIATAQEL 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           A + D  +  ++      +R++      Q   L     D  + ++E+ AG GG ES  +A
Sbjct: 69  AADPDMKAFGEDELRAARERMESLEGELQRLLLPKNPNDHRNIFVEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+++++ E +     +  G K     + G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ + P  D   +I+I+ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATEAQGRIHTSACTVAIMPEADALADIQINPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A+L +   Q+RE  A    + K+ IG G    +
Sbjct: 249 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKD--RQEREAQAKEASARKSLIGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       ++DGDLD+ + A  A  +
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKIDAIMDGDLDELVGALAAEHQ 349


>gi|307636860|gb|ADN79310.1| hypothetical protein hp908_0179 [Helicobacter pylori 908]
 gi|325995449|gb|ADZ50854.1| Peptide chain release factor 2 [Helicobacter pylori 2018]
 gi|325997047|gb|ADZ49255.1| Peptide chain release factor 2 [Helicobacter pylori 2017]
          Length = 363

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 175/352 (49%), Positives = 243/352 (69%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L +++ L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESVELFELAQNDNDEVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362


>gi|7388055|sp|P74476|RF2_SYNY3 RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 372

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 145/351 (41%), Positives = 219/351 (62%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S +L       D      ++  L      P  W +  +A+ +++      + +      
Sbjct: 15  ISSRLGQTQDYLDLPGLKAKVQDLEQCAAQPDFWDDTDQAQQILQTLNETKSQLEQWGIW 74

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           Q +  D+  ++EL   EDD ++L E    L++++ E++  + + LLSG  D+  A L ++
Sbjct: 75  QQQWQDSQAIVELLELEDDQALLTEAETTLEQLQKELDRWELQQLLSGPYDAKGATLTIN 134

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGT++QDWA MLLRMYTRW+EK+ +K    EI +G+EAG+KS TL I+G  AYG+LK
Sbjct: 135 AGAGGTDAQDWAEMLLRMYTRWSEKQGYKVHLAEISEGDEAGLKSVTLEIEGRYAYGYLK 194

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241
            E+G HRLVRISP+++N +R TSF+ + V P+  +++I ++I + D  I T RA G GGQ
Sbjct: 195 SEKGTHRLVRISPFNANGKRQTSFAGVEVMPLLGEEAISLDIPDKDLDISTSRAGGKGGQ 254

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++AVRI H+PTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R +       
Sbjct: 255 NVNKVETAVRIVHLPTGLAVRCTQERSQLQNKEKALAILKAKLLIVLEEQRAQAIAEIRG 314

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              E  WG QIR+YV  PYQ+VKDLRTN+E T    V+DG+L DF++A L 
Sbjct: 315 DMVEAAWGTQIRNYVFHPYQLVKDLRTNVETTDVGGVMDGELSDFIEAYLR 365


>gi|262370876|ref|ZP_06064200.1| peptide chain release factor 2 [Acinetobacter johnsonii SH046]
 gi|262314238|gb|EEY95281.1| peptide chain release factor 2 [Acinetobacter johnsonii SH046]
          Length = 310

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 168/307 (54%), Positives = 220/307 (71%), Gaps = 1/307 (0%)

Query: 47  RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
           +E+  L+N ++ +  +  +L D   +L+LA+E DD S+L +    L   + E+   +F  
Sbjct: 3   KEKGELENVLNVLDGLATQLEDAQAMLDLAVEADDESLLADVQAELTSAEEELAKLEFRR 62

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S   D N  Y+E+ AG+GGTE+QDWA+MLLRMY RW E+  FK E +E  DG+ AGIK
Sbjct: 63  MFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEESDGDVAGIK 122

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS+++V P VDD+IEI+I+ S
Sbjct: 123 SATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFVSPEVDDNIEIDINPS 182

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R DTYRASGAGGQH+N TDSAVR+TH PTG+VV CQ +RSQH N+  AW  LRAKLYE
Sbjct: 183 DVRTDTYRASGAGGQHINKTDSAVRLTHAPTGIVVACQNQRSQHANRDHAWKQLRAKLYE 242

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LE+ KR E A   E SK++IGWG QIRSYVL     +KDLRT +E ++   VLDGDLD F
Sbjct: 243 LEMSKRNEAAQALEDSKSDIGWGSQIRSYVLDD-SRIKDLRTGVENSNTGAVLDGDLDKF 301

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 302 IEASLKQ 308


>gi|258645336|ref|ZP_05732805.1| peptide chain release factor 2 [Dialister invisus DSM 15470]
 gi|260402685|gb|EEW96232.1| peptide chain release factor 2 [Dialister invisus DSM 15470]
          Length = 330

 Score =  242 bits (617), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 159/326 (48%), Positives = 215/326 (65%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W+N   AK + ++      A      +  R      LL++A+EE+D  +  E  
Sbjct: 1   MSDPSFWENGDHAKEISQKATEAKAAYDTYTRLFARAESIKELLDMAIEENDQDMEGELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  +K  ++ K+ E LL+ E D+NDA +  HAGAGGTE+QDW  ML+RMY +WAE   
Sbjct: 61  EEINELKDILDKKEIELLLNDEYDANDAIITFHAGAGGTEAQDWTEMLIRMYIKWAESEG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L +  G+EAG+KSA  +++G  AYG LK E+GVHRLVRISP+D+  RRHTSFS++
Sbjct: 121 FVLEELNMLPGDEAGVKSAEYMVRGKFAYGLLKSEKGVHRLVRISPFDAAKRRHTSFSAV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + D IEI+++ +D R+D YRASGAGGQH+N T SAVR+THIPTG+V  CQ ERSQ
Sbjct: 181 DVMPEIGDDIEIDLNMADVRVDYYRASGAGGQHINKTSSAVRMTHIPTGIVAACQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK Q   +L+AKL+ELE+QKRE++    E  +  I WG QIRSYV QPY +VKD RT 
Sbjct: 241 FQNKEQCLRLLKAKLFELEMQKREQVKKGIEGEQQAIEWGSQIRSYVFQPYTLVKDNRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355
           IE  +   V+DG L+ F++  L  KK
Sbjct: 301 IETGNIQSVMDGGLNPFIEGFLKHKK 326


>gi|254671653|emb|CBA09383.1| peptide chain release factor 1 [Neisseria meningitidis alpha153]
          Length = 372

 Score =  242 bits (617), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 121/349 (34%), Positives = 174/349 (49%), Gaps = 8/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +       RL  +      P    ++   + L RE   L   +   +  +    D  
Sbjct: 18  SILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQSDLA 77

Query: 71  ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E+  + +      E  +  +          Q   L     D  + ++EV AG GG E
Sbjct: 78  DAEEMLSDPEMKDFAAEEIEAAKAKIGALDTELQKLLLPKDADDDKNIFIEVRAGTGGDE 137

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR
Sbjct: 138 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHR 197

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  +IE++  D RIDT+RASGAGGQH+N TDSA
Sbjct: 198 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDTFRASGAGGQHINKTDSA 257

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G
Sbjct: 258 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 315

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V+DGDL +   A +A  +
Sbjct: 316 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQ 363


>gi|253580116|ref|ZP_04857383.1| peptide chain release factor 1 [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848635|gb|EES76598.1| peptide chain release factor 1 [Ruminococcus sp. 5_1_39BFAA]
          Length = 358

 Score =  242 bits (617), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 121/351 (34%), Positives = 192/351 (54%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D+ + R   +  +  +P +  N    + LM+E+  L   +   +E +        
Sbjct: 1   MFDKLDDLLIRFEEVLNELGEPGVTDNQEHFQKLMKEQSDLQPIVDAYREYKKNKETIQD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   + L   K  VE  + E           D+ +  +E+ AGAGG
Sbjct: 61  SLSMLEEEKDEDMREMLKEELSEAKKNVEELEHELKILLLPKDPNDNKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY ++AE R++KTE + +++    G K  T +I G  AY  LK E GV
Sbjct: 121 DEAALFAAEIYRMYVKYAESRRWKTEMMSLNENGIGGFKEVTFMITGAGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ + P   + I+  +  +DC+ D +RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTCTVAIMP-EAEEIDFHLDMNDCKFDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+ CQ E+SQ KNK +A  +LR++LYE+EL K+ +     E+ +++IG
Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYEMELAKQHD--AEAEARRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +      +VL+GDLD+ + + +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHRLENVLNGDLDEIIDSLIAADQ 347


>gi|167759398|ref|ZP_02431525.1| hypothetical protein CLOSCI_01745 [Clostridium scindens ATCC 35704]
 gi|167662955|gb|EDS07085.1| hypothetical protein CLOSCI_01745 [Clostridium scindens ATCC 35704]
          Length = 356

 Score =  242 bits (617), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 121/351 (34%), Positives = 193/351 (54%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + RL  + ++ ++P++  +    + LM+E+  L   +   KE +        
Sbjct: 1   MFDKLEDLLIRLEEVLSELQEPNVANDQNRFRKLMKEQNELTPIVEAYKEYKACKQAIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
            L++  EE D  + +   + L   K  VE  + E           D  +  +E+ AGAGG
Sbjct: 61  SLQMLEEESDEEMRELAKEELNDSKARVEELEHELKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE R++K E +E  +    G+K+ T +I G  AY  +K E GV
Sbjct: 121 DEAALFAAEIYRMYLHYAESRRWKVELVECEEIGIGGMKNVTFMINGKGAYSVMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + ++I+I E D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMP-EAEDVDIQIDEKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LRAKLY++E QKR +     E+ K++IG
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFALLRAKLYDMECQKRHD--AEAEARKSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++GD+ + + A +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIGLTLYKLDKIMNGDIQEIIDACIAADQ 347


>gi|251780395|ref|ZP_04823315.1| peptide chain release factor 2 [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
 gi|243084710|gb|EES50600.1| peptide chain release factor 2 [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
          Length = 325

 Score =  242 bits (617), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 154/326 (47%), Positives = 220/326 (67%), Gaps = 1/326 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++   W +   A+ + +E + + + I  ++ +Q +L D  +L E+  ++D+ S  +   
Sbjct: 1   MQEDGFWNDTKRAEEITKESKRIKDKIQRVESVQSKLDDIEVLKEMMDDDDEESAYE-II 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +N++ I+ E++    E LLSGE D N+A L +H G GGT++ DW  MLLRMYTRW EK+ 
Sbjct: 60  NNIKEIEEEIDNYNMEILLSGEYDKNNAILTLHVGVGGTDANDWTEMLLRMYTRWCEKKN 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K E +++ +G+EAGIKS TL + G  AYG+LK E+G+HRLVRISP+++N +R TSF+S+
Sbjct: 120 YKVEVIDLLEGDEAGIKSVTLKVIGEYAYGYLKAEKGIHRLVRISPFNANGKRQTSFASM 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +    +I+I   D ++DTYRASGAGGQH+N TDSAVRITHIPTGVVVQCQ ERSQ
Sbjct: 180 EVLPELTKEQDIDIRSEDIKVDTYRASGAGGQHINKTDSAVRITHIPTGVVVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             NK  A  ML+AKL EL+ +  +E          ++GWG QIRSYV  PY +VKD RTN
Sbjct: 240 FSNKDTAMGMLKAKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTN 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355
           +E ++ + V+DGDLD F+ + L   K
Sbjct: 300 VEVSNVTAVMDGDLDLFINSYLKSSK 325


>gi|197294594|ref|YP_001799135.1| Protein chain release factor B [Candidatus Phytoplasma
           australiense]
 gi|171853921|emb|CAM11884.1| Protein chain release factor B [Candidatus Phytoplasma
           australiense]
          Length = 370

 Score =  242 bits (617), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 154/350 (44%), Positives = 224/350 (64%), Gaps = 3/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +++ L  L    +   + Q L+ +N   +    W +  +A    ++   L   I+ +K +
Sbjct: 13  IAQNLRDLKEAINLSQSYQTLNQINELMQKKDFWDDPKKAVATSQKFNDLQEKINTLKHL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D +    L LE +  +      + ++++   V   + +  L+   D+N+A L  H
Sbjct: 73  ETNHQDLVT--FLDLESNQNNETAFLEEEIKKLIDAVLNFKIKVFLNQPYDNNNAILIFH 130

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDW  ML RMY ++A+K+ FKTE L+   GEEAGIKSATLL+KG  AYG+LK
Sbjct: 131 PGAGGTESQDWCEMLFRMYQKYAQKKNFKTEILDYQSGEEAGIKSATLLVKGAYAYGYLK 190

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVR+SP+D+N++RHTSF S  V P + + I+I++ + D + D +R+SGAGGQH
Sbjct: 191 AEKGVHRLVRVSPFDTNAKRHTSFVSCDVLPEIKEKIKIDLRQEDLKFDFFRSSGAGGQH 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGES 301
           VNTTDSAVRITH+PTG+VV CQ ERSQ++N+ +A  ML+ KL++L  +K++E  A   + 
Sbjct: 251 VNTTDSAVRITHLPTGLVVSCQNERSQNQNREKALQMLKIKLFQLADKKQKEEHAKNFQG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + EIGWG QIRSYV  PY+MVKD RTN E      V+DG++D F+   L
Sbjct: 311 EQKEIGWGSQIRSYVFHPYKMVKDHRTNQEIFQLEQVMDGNIDVFINGYL 360


>gi|153938890|ref|YP_001389537.1| peptide chain release factor 2 [Clostridium botulinum F str.
           Langeland]
 gi|152934786|gb|ABS40284.1| peptide chain release factor 2 [Clostridium botulinum F str.
           Langeland]
 gi|295317635|gb|ADF98012.1| peptide chain release factor 2 [Clostridium botulinum F str.
           230613]
          Length = 325

 Score =  242 bits (617), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 147/323 (45%), Positives = 216/323 (66%), Gaps = 1/323 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++P+ W ++ EA+ +  E ++L + ++    +++ + D + L E+ L E+D  + +E  
Sbjct: 1   MQNPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIEDIISLCEM-LSEEDDDMKKEII 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + IK E +  + E+LLSGE D N+  + +H+G GGT++QDW +ML RMYTRWAEK  
Sbjct: 60  SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  + +++ + E+AGIKS TL I G   YG+LK E+G+HRLVRISP+++N +R TSF+SI
Sbjct: 120 FAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASI 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + P + D  EIEI   D +IDTYRA GAGGQHVN T+SAVRITH+PTG++VQCQ ERSQ
Sbjct: 180 EILPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK  A  +L++KL EL+ +  +E          ++GWG QIRSYV  PY +VKD RT 
Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKERIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E ++   V++GD++ F+   L 
Sbjct: 300 AETSNVDSVMNGDINMFITQYLK 322


>gi|108562592|ref|YP_626908.1| peptide chain release factor 2 [Helicobacter pylori HPAG1]
 gi|122386784|sp|Q1CUY8|RF2_HELPH RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|107836365|gb|ABF84234.1| peptide chain release factor RF-2 [Helicobacter pylori HPAG1]
          Length = 363

 Score =  242 bits (617), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 175/352 (49%), Positives = 243/352 (69%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L +++ L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESVELFELAQNDNDEVTLSLLYEEAPTLEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362


>gi|170755895|ref|YP_001779801.1| peptide chain release factor 2 [Clostridium botulinum B1 str. Okra]
 gi|169121107|gb|ACA44943.1| peptide chain release factor 2 [Clostridium botulinum B1 str. Okra]
          Length = 325

 Score =  242 bits (617), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 148/323 (45%), Positives = 217/323 (67%), Gaps = 1/323 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++P+ W ++ EA+ +  E ++L + +     +++ + D + L E+ L E+D  + +E  
Sbjct: 1   MQNPNFWNDIKEAQKITSEEKYLKDKLIKYNHLRNTIEDIISLCEM-LSEEDDDMKKEII 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + IK E++  + E+LLSGE D N+  + +H+G GGT++QDW +ML RMYTRWAEK  
Sbjct: 60  SEYKNIKEEIDKFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  + +++ + E+AGIKS TL I G   YG+LKGE+G+HRLVRISP+++N +R TSF+SI
Sbjct: 120 FTIKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASI 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + P + +  EIEI   D +IDTYRA GAGGQHVN T+SAVRITHIPTG++VQCQ ERSQ
Sbjct: 180 EILPELTEDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK  A  +L++KL EL+ +  +E          ++GWG QIRSYV  PY +VKD RT 
Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E ++   V++GD++ F+   L 
Sbjct: 300 AETSNVDSVMNGDINIFITQYLK 322


>gi|58039738|ref|YP_191702.1| peptide chain release factor 2 [Gluconobacter oxydans 621H]
 gi|58002152|gb|AAW61046.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Gluconobacter
           oxydans 621H]
          Length = 322

 Score =  242 bits (617), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 199/308 (64%), Positives = 245/308 (79%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRER  L N I  ++ I+  +   L L+ELA  E D S++Q+    L+ I  +V  ++ E
Sbjct: 1   MRERTTLANQIEGVQRIESEVEGTLELVELAEMEGDESLVQDAVQTLRAIAEDVRKREIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEADSND Y+EV+AGAGGTE+QDWA MLLRMYTRWAE+  +K   +E  +GE+AGI
Sbjct: 61  SLLSGEADSNDCYVEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTFIEGSEGEQAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ + GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPVVDDSIEI+I++
Sbjct: 121 KSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVVDDSIEIDIND 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R+DT+RASGAGGQHVN TDSA+RITHIPTG+VV CQ +RSQH+N+A+A  MLRA++Y
Sbjct: 181 SDLRVDTFRASGAGGQHVNKTDSAIRITHIPTGIVVACQTDRSQHRNRAKAMEMLRARMY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E ELQKRE  A   E+SKT+IGWG QIRSYVL PYQ+VKDLRT +EK +P  VLDG LDD
Sbjct: 241 EAELQKREAAAAQTEASKTDIGWGHQIRSYVLAPYQLVKDLRTGVEKGNPGAVLDGALDD 300

Query: 346 FMKATLAI 353
           FM A+LA 
Sbjct: 301 FMSASLAQ 308


>gi|309782949|ref|ZP_07677669.1| peptide chain release factor 1 [Ralstonia sp. 5_7_47FAA]
 gi|308918373|gb|EFP64050.1| peptide chain release factor 1 [Ralstonia sp. 5_7_47FAA]
          Length = 360

 Score =  242 bits (617), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 183/344 (53%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R+  +N          N+ + + L RE   L+  ++     +    D     EL
Sbjct: 9   LDQLAERIVEINALLAREDATANLDQYRKLTREHAELEPVVAQFAAWKQAEEDIATAQEL 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           A + D  +  ++      +R++      Q   L     D  + ++E+ AG GG ES  +A
Sbjct: 69  AADPDMKAFAEDELRAARERMESLEGELQRLLLPKDPNDHRNIFVEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+++++ E +     +  G K     + G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ + P  D   +I+I+ +D RIDT+RASGAGGQH+N T+SAVRITH
Sbjct: 189 ATEAQGRIHTSACTVAIMPEADALADIQINPADLRIDTFRASGAGGQHINKTESAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A+L +   Q+RE  A    + K+ IG G    +
Sbjct: 249 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKD--RQEREAQAKEASARKSLIGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       ++DGD+D+ + A  A  +
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKIDAIMDGDIDELVGALAAEHQ 349


>gi|262280476|ref|ZP_06058260.1| peptide chain release factor 2 [Acinetobacter calcoaceticus
           RUH2202]
 gi|262258254|gb|EEY76988.1| peptide chain release factor 2 [Acinetobacter calcoaceticus
           RUH2202]
          Length = 310

 Score =  242 bits (617), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 168/307 (54%), Positives = 223/307 (72%), Gaps = 1/307 (0%)

Query: 47  RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
           +E+  L+N I+ +  +  +L D   +L+LA+E DD S+L++    L   + E+   +F  
Sbjct: 3   KEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELGAAEDELAKLEFRR 62

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S   D N  Y+E+ +G+GGTE+QDWA+MLLRMY RW E+  FK E +E+ DG+ AGIK
Sbjct: 63  MFSNPMDPNPCYVEIQSGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAGIK 122

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+ S
Sbjct: 123 SATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDINPS 182

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R DTYRASGAGGQH+N TDSAVR+TH PTG+VV CQ +RSQH N+  AW  LRAKLYE
Sbjct: 183 DVRTDTYRASGAGGQHINKTDSAVRLTHTPTGIVVACQNQRSQHANRDHAWKQLRAKLYE 242

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LE+QKR E A   E SK++IGWG QIRSYVL     +KDLRT +E ++   VLDGDLD F
Sbjct: 243 LEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDD-SRIKDLRTGVENSNTGAVLDGDLDRF 301

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 302 IEASLKQ 308


>gi|254778885|ref|YP_003056990.1| peptide chain release factor 2 [Helicobacter pylori B38]
 gi|254000796|emb|CAX28720.1| Peptide chain release factor 2 (RF-2) [Helicobacter pylori B38]
          Length = 363

 Score =  242 bits (617), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 176/352 (50%), Positives = 243/352 (69%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +D L +++ L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KDSLDESVELFELAQNDNDEVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362


>gi|15644800|ref|NP_206970.1| peptide chain release factor 2 [Helicobacter pylori 26695]
 gi|2500142|sp|P55999|RF2_HELPY RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|2313254|gb|AAD07236.1| peptide chain release factor RF-2 (prfB) [Helicobacter pylori
           26695]
          Length = 363

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 173/352 (49%), Positives = 242/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L +++ L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESVELFELAQNDNDEVTLSLLYEEAPILENSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YR+SGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRSSGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362


>gi|208434124|ref|YP_002265790.1| peptide chain release factor RF-2 [Helicobacter pylori G27]
 gi|238054481|sp|B5Z9U4|RF2_HELPG RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|208432053|gb|ACI26924.1| peptide chain release factor RF-2 [Helicobacter pylori G27]
          Length = 363

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 175/352 (49%), Positives = 244/352 (69%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L +++ L ELA  ++D + L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESVELFELAQNDNDETTLSLLYEEAPTLEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362


>gi|319637760|ref|ZP_07992526.1| peptide chain release factor 1 [Neisseria mucosa C102]
 gi|317400915|gb|EFV81570.1| peptide chain release factor 1 [Neisseria mucosa C102]
          Length = 358

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 122/349 (34%), Positives = 176/349 (50%), Gaps = 8/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +       RL  +      P    ++   + L RE   L   +   +  Q    D  
Sbjct: 4   SILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQSDLA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E+  + +      E  +  +          Q   L     D  + ++EV AG GG E
Sbjct: 64  DAEEMLSDPEMKDFAAEEIEAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR
Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G
Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V+DGDL++   A +A  +
Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQ 349


>gi|211938843|pdb|2JL5|Y Chain Y, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome (Part 1 Of 4). This File
           Contains The 30s Subunit.
 gi|211938901|pdb|2JL7|Y Chain Y, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome (Part 3 Of 4). This File
           Contains The 30s Subunit.
 gi|237823553|pdb|2WH1|Y Chain Y, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome
 gi|237823612|pdb|2WH3|Y Chain Y, Insights Into Translational Termination From The Structure
           Of Rf2 Bound To The Ribosome). This File Contains The
           30s Subunit
          Length = 351

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 153/352 (43%), Positives = 208/352 (59%), Gaps = 5/352 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+++L  L G  D      RL  L  + EDP LW +   A+ + +E   L   +   + +
Sbjct: 1   LAQRLEGLRGYLDIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRSL 60

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L   L L+E    E+  +        L+    +++    ++LL+      +A L + 
Sbjct: 61  ESDLQGLLELMEELPAEEREA----LKPELEEAAKKLDELYHQTLLNFPHAEKNAILTIQ 116

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTE+ DWA MLLRMYTR+AE++ F+ E +++  G EAGI  A +L+KG NAYG L 
Sbjct: 117 PGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLLS 176

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR SP+D++ RRHTSF+ + V P VD+ +E+ +   + RID  RASG GGQ 
Sbjct: 177 PEAGVHRLVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQG 236

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+ H+PTG+ V CQ  RSQ KNK  A  +L+A+LYELE +KREE        
Sbjct: 237 VNTTDSAVRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRGE 296

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              I WG QIRSYVL     VKD RT + +  P +VLDGDL D + A L  K
Sbjct: 297 VEPIEWGSQIRSYVLDK-NYVKDHRTGLMRHDPENVLDGDLMDLIWAGLEWK 347


>gi|261867616|ref|YP_003255538.1| peptide chain release factor 1 [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261412948|gb|ACX82319.1| peptide chain release factor 1 [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 360

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 182/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+  +R   L     D  +  +  + +   +E   L++ +           +      L
Sbjct: 9   LDSLKERYEELEALLGDASVISDQDKFRAYSKEYAQLEDVVKSFNRWNQLNSNLEEAQLL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q   +  +    +VE   Q   L     D  + YLE+ AG GG E+  +A
Sbjct: 69  LDDPEMKEMAQMEIEESKAELEQVEQHLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE ++++ E L  ++ E+ G K    L+ G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAETKRWRVEVLSENESEQGGFKEIIALVSGDGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELLESEMPEINPADLRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A ++L ++L + E +K  +     ++ +  +G G +   
Sbjct: 249 IPTGMVVECQDERSQHKNKAKALSVLASRLVQQEQEKLAQEQ--ADTRRNLLGSGDRSDK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      +V++G +DD ++  +   +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDDLIQPIITEYQ 349


>gi|308182345|ref|YP_003926472.1| peptide chain release factor 2 [Helicobacter pylori PeCan4]
 gi|308064530|gb|ADO06422.1| peptide chain release factor 2 [Helicobacter pylori PeCan4]
          Length = 363

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 175/352 (49%), Positives = 243/352 (69%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L +++ L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESIELFELAQNDNDEVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362


>gi|223982761|ref|ZP_03632989.1| hypothetical protein HOLDEFILI_00263 [Holdemania filiformis DSM
           12042]
 gi|223965261|gb|EEF69545.1| hypothetical protein HOLDEFILI_00263 [Holdemania filiformis DSM
           12042]
          Length = 327

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 149/325 (45%), Positives = 204/325 (62%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             + H W +   A+ ++R+   +    +   +++  L      ++   +  D  + +   
Sbjct: 1   MNEEHFWDDPKAAQNVIRQCNGMKELEAKYHQMEQSLASLQETVDELNQNFDEELKELLD 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              Q    + E  +   LLS   D N+A LE+H GAGGTESQDWA+ML RMY RWAE++ 
Sbjct: 61  MEYQDTLNQFEDFEVMVLLSHPYDKNNAILELHPGAGGTESQDWASMLYRMYCRWAERKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K   L+  +GEEAGIKS ++LI+G  AYG+LK E+GVHRLVRISP+DS+ RRHTSF+S+
Sbjct: 121 YKVTLLDYQEGEEAGIKSVSILIEGDMAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASL 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P   D IEI I E D  + T RASGAGGQH+N TDSAVR+TH PTG+VV CQ ERSQ
Sbjct: 181 DVMPQFSDEIEITIDERDLDVVTMRASGAGGQHINKTDSAVRMTHKPTGIVVSCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+ +  NML++KLY+  ++++E         +  I WG QIRSYV  PY MVKD RT 
Sbjct: 241 IQNRERCMNMLKSKLYQRMIEEQEAKLAAIRGEQKNIEWGSQIRSYVFCPYTMVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  S  +V+DGDLD F+ + L  +
Sbjct: 301 YEMGSVQNVMDGDLDGFIFSYLKSQ 325


>gi|52425247|ref|YP_088384.1| peptide chain release factor 1 [Mannheimia succiniciproducens
           MBEL55E]
 gi|61214602|sp|Q65TB1|RF1_MANSM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|52307299|gb|AAU37799.1| PrfA protein [Mannheimia succiniciproducens MBEL55E]
          Length = 360

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 118/344 (34%), Positives = 180/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+  +R   L     D  +  +  + +   +E   L+  +      +    +      L
Sbjct: 9   LDSLNERYEELEALLGDASVISDQDKFRAYSKEYSQLEEVVKTFSRWKQLNSNIEEAELL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q   +  +    EVE   Q   L     D  +AYLE+ AG GG E+  +A
Sbjct: 69  LDDPEMKEMAQMEIEESKNELEEVEQHLQILLLPRDPNDEYNAYLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE ++++ E L  ++ E+ G K    L+ G N YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEMKRWRVEVLSENESEQGGYKEIIALVSGDNVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A  +L ++L + E  K         + +  +G G +   
Sbjct: 249 IPTGMVVECQDERSQHKNKAKALAVLASRLVQAEQDKLAAEQ--ATTRRNLLGSGDRSDK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      +V++G +D+ ++  +   +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 349


>gi|39938959|ref|NP_950725.1| protein chain release factor B [Onion yellows phytoplasma OY-M]
 gi|39722068|dbj|BAD04558.1| protein chain release factor B [Onion yellows phytoplasma OY-M]
          Length = 369

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 160/350 (45%), Positives = 218/350 (62%), Gaps = 3/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L + L  L    D     Q +  LN   +    W+   +A  + ++   L +  + ++ +
Sbjct: 13  LHQNLQDLKQALDIKKTNQTIEKLNYAMQKEDFWKYPQKAVTISQQFNDLQDKKTTLETL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D   L  L    +  S L    + L+ +   V   + +  L+   D N+A L  H
Sbjct: 73  KQNYLDLETLFNLNESPNKTSAL--LEEELKNLTKAVFDFKIKIFLNQSYDINNAILLFH 130

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDW  ML RMY ++A+K+ FKTE L+   GE AGIKSATLLIKG  AYG+LK
Sbjct: 131 PGAGGTESQDWCEMLFRMYQKYAQKKNFKTEILDYQPGEGAGIKSATLLIKGTYAYGYLK 190

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+D+NS+RHTSF +  V P +++ I+I +   D +ID +R+SGAGGQH
Sbjct: 191 AEKGVHRLVRISPFDANSKRHTSFVACDVLPEINEEIKINLKTEDLKIDVFRSSGAGGQH 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI-ANIGES 301
           VNTTDSAVRITH+PTG+VV CQ ERSQ KNK +A  ML+ KL++L  +K++E  A   +S
Sbjct: 251 VNTTDSAVRITHLPTGLVVGCQNERSQIKNKEKALQMLKTKLFQLASKKQKEENAKKFQS 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + E GWG QIRSYV  PY+MVKD RTN E      V+DG++D+F+   L
Sbjct: 311 DQKENGWGSQIRSYVFHPYKMVKDHRTNQEIFQLEQVMDGNIDEFINGYL 360


>gi|94987335|ref|YP_595268.1| protein chain release factor B [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731584|emb|CAJ54947.1| Protein chain release factor B [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 362

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 154/353 (43%), Positives = 210/353 (59%), Gaps = 8/353 (2%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GG+FD  +   RLS +      P  W N      +++E+  L+      +++    
Sbjct: 1   MKFFGGVFDQPSYKNRLSEIEKILSAPDAWSNPEALTPILKEKSQLEADNLRFEKLHLCH 60

Query: 67  CDNLILLELALEE--------DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
            + +   EL  E         +    L      +++ +  +E  +   LL  E D  DA 
Sbjct: 61  TEMIDWFELVQEFLTTNESSTEFLEALTALELQVKKFQDAMEEAEMYLLLGAEEDKMDAI 120

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           LE+H GAGGTE+QDWA ML RMY RWA+   F  E ++   G+EAGIKS TL I G NAY
Sbjct: 121 LEIHPGAGGTEAQDWAEMLERMYLRWADLHGFSKEEMDYLPGDEAGIKSVTLRISGENAY 180

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G LKGE+G+HRL+RISP+DS+ RRHTSF+S+ V P   + + I+I +SD RID +R+SG 
Sbjct: 181 GLLKGERGIHRLIRISPFDSSGRRHTSFASVDVIPDAGEEVVIDIKDSDLRIDVFRSSGP 240

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTT SAVRITHIPTG+V QCQ E+SQH NK  A  +LRA+LYE E++ R+     
Sbjct: 241 GGQSVNTTSSAVRITHIPTGIVAQCQNEKSQHHNKESAMRILRARLYEQEIKLRDAAKQA 300

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               K  I +G QIR+Y +QPY++VKD RTN E +    VL G +D F+ + L
Sbjct: 301 QYMGKEAISFGSQIRTYTMQPYRLVKDHRTNCESSDVEAVLGGQIDKFINSYL 353


>gi|225023585|ref|ZP_03712777.1| hypothetical protein EIKCOROL_00444 [Eikenella corrodens ATCC
           23834]
 gi|224943680|gb|EEG24889.1| hypothetical protein EIKCOROL_00444 [Eikenella corrodens ATCC
           23834]
          Length = 358

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 120/349 (34%), Positives = 181/349 (51%), Gaps = 8/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + D   +  +RL  +      P    ++   + L +E   L   +   ++ +    D  
Sbjct: 4   SVLDKLQSLSERLEEVTALLSTPEATVDINRFRQLNQEHAELTPVVEAYRQYRQAESDLA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              ++  + +      E  +  +          Q   L   E D  + +LEV AG GG E
Sbjct: 64  DAEDMLADPEMKDFAAEEIEAAKAKIETLDTELQKLLLPKDEDDGKNIFLEVRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMYTR+AE+ +++ E +  ++ +  G K     I G  AYG LK E G HR
Sbjct: 124 AALFAADLLRMYTRYAERNRWQVEIVSANESDLGGYKEVIARIAGIGAYGRLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  EI+++ ++ RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEEIQLNPAELRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +RITH+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G
Sbjct: 244 IRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDK--QKREAQAKEAAERKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V+DGD+++   A +A  +
Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDMEEITNALIAEHQ 349


>gi|153956213|ref|YP_001396978.1| peptide chain release factor 2 [Clostridium kluyveri DSM 555]
 gi|219856538|ref|YP_002473660.1| hypothetical protein CKR_3195 [Clostridium kluyveri NBRC 12016]
 gi|146349071|gb|EDK35607.1| PrfB [Clostridium kluyveri DSM 555]
 gi|219570262|dbj|BAH08246.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 328

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 153/325 (47%), Positives = 219/325 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++P+ W ++  A+ +  E ++L+  ++    +   + D  ILLE+  EE+D    QE  
Sbjct: 1   MQEPNFWNDIDNAQKIASEEKNLEGRLNRYDLLSHNIEDARILLEIIKEEEDSMSFQEVM 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +++ I+ +VE  + E LL GE D N+A L +H G GGT++QDW  MLLRMY RWAEK  
Sbjct: 61  KDIKDIEFQVEIFRTEILLCGEYDKNNAILNLHVGVGGTDAQDWTEMLLRMYIRWAEKMG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K   +++ + E+AGIKS +L I G  AYG+LK E+G+HRLVRISP+++N +R TSF+S+
Sbjct: 121 YKVNIIDMLEAEDAGIKSVSLSIIGEFAYGYLKSEKGIHRLVRISPFNANGKRQTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +    +IEI   D ++DT+RA GAGGQHVN T+SAVRITHIPTG+VVQCQ ERSQ
Sbjct: 181 EVLPELTGDQDIEIRSEDLKVDTFRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK QA  +L+AKL EL+ +  ++          ++GWG QIRSYV  PY +VKD RT 
Sbjct: 241 HYNKEQALKILKAKLVELKERAHKDRIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E ++ S V+DGD+D+F+K  L  +
Sbjct: 301 VESSNVSSVMDGDIDNFIKGYLKQQ 325


>gi|325263710|ref|ZP_08130443.1| peptide chain release factor 1 [Clostridium sp. D5]
 gi|324030748|gb|EGB92030.1| peptide chain release factor 1 [Clostridium sp. D5]
          Length = 357

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 116/351 (33%), Positives = 193/351 (54%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + R   +  + ++P +  + +  + LM+E+  L+  +   +E +    +   
Sbjct: 1   MFDRLEDLLIRYEEVMGELQEPDVANDPVRFRKLMKEQSDLNPIVEAYREYKKSKQNIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   + L   K  VE  +       L     D  +  +E+ AGAGG
Sbjct: 61  SLAMLEEESDEEMREMAKEELNDSKARVEELEQELKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE R++K E + +++    G K    +I G  AY  LK E GV
Sbjct: 121 DEAALFAAEIYRMYVHYAEGRRWKVEMISLNENGIGGFKECVFMITGQGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ + P   + +++ I E D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAIMP-EAEEVDVVIEEKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KL++LEL+K++  A+  E+ +++IG
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLFDLELEKQQ--ASEAEARRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+GDLD+ + + +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDTILNGDLDEIIDSLIAADQ 347


>gi|238854884|ref|ZP_04645214.1| peptide chain release factor 2 [Lactobacillus jensenii 269-3]
 gi|260664171|ref|ZP_05865024.1| peptide chain release factor 2 [Lactobacillus jensenii SJ-7A-US]
 gi|282931596|ref|ZP_06337089.1| peptide chain release factor 2 [Lactobacillus jensenii 208-1]
 gi|313472385|ref|ZP_07812877.1| peptide chain release factor 2 [Lactobacillus jensenii 1153]
 gi|238832674|gb|EEQ24981.1| peptide chain release factor 2 [Lactobacillus jensenii 269-3]
 gi|239529755|gb|EEQ68756.1| peptide chain release factor 2 [Lactobacillus jensenii 1153]
 gi|260562057|gb|EEX28026.1| peptide chain release factor 2 [Lactobacillus jensenii SJ-7A-US]
 gi|281304207|gb|EFA96316.1| peptide chain release factor 2 [Lactobacillus jensenii 208-1]
          Length = 332

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 154/325 (47%), Positives = 208/325 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W N   A+ L+     L        ++     D    LEL  EE D  +  E  
Sbjct: 1   MADPDFWNNQESAQKLISATNKLKEKRDHFNDLAQAFSDEEAALELLKEESDTDLQAEVE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L+ +K      +   LLSG+ D+N+A +E+H GAGGTE+ DWA ML+RMY R++E   
Sbjct: 61  SDLESLKDSFHQYELNLLLSGKYDTNNALMEIHPGAGGTEAMDWAQMLMRMYQRFSEAHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E  +   G+EAG+KS ++LIKG NAYG LKGE GVHRLVRISP+D+  RRHTSF+S+
Sbjct: 121 FTFEIDDYEPGDEAGVKSVSVLIKGTNAYGLLKGEMGVHRLVRISPFDAAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDSIE++I+ +D RID +R+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ
Sbjct: 181 EVIPEIDDSIEVDINPADLRIDVFRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK  A N LRAKL++LE +K+ +     +  + +I WG QIRSYV  PY MVKD RTN
Sbjct: 241 FQNKETAMNALRAKLFQLEEEKKRKEKEKLKGVQQDIAWGSQIRSYVFHPYSMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E +  + V+DG LD+ + + L  +
Sbjct: 301 FETSDVNGVMDGKLDNLIYSFLQWR 325


>gi|297379396|gb|ADI34283.1| peptide chain release factor 2 [Helicobacter pylori v225d]
          Length = 363

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 242/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L ++  L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESTELFELAQNDNDEVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSTAKN--EE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  +++ L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILESVLIAK 362


>gi|326389251|ref|ZP_08210819.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus JW
           200]
 gi|325994614|gb|EGD53038.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus JW
           200]
          Length = 356

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 121/346 (34%), Positives = 193/346 (55%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL---IL 72
                 R   L+ K  DP++  NV E +  ++E   +++ +   +E +  L D      L
Sbjct: 5   LQAIEDRYVELSQKISDPNIISNVNEWRKYVKEHAAIEDIVLKYREYKKVLEDIEATKEL 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L    EE      +E S   ++ +  +E  +   +     D  +  +E+ AGAGG E+  
Sbjct: 65  LSSNDEELKEMAEEELSQLEEKKEKLLEEIKILLIPKDPNDEKNVIMEIRAGAGGEEAAL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A+ L RMY+ +AEK+ +K E +  ++ +  G K   L I G  AY  LK E GVHR+ R
Sbjct: 125 FAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGAYSRLKYESGVHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P   + +++EI+ +D ++D +R+ G GGQ VNTTDSAVR+
Sbjct: 185 VPTTEAGGRIHTSTATVAVLP-EVEEVDVEINPNDIKVDVFRSGGHGGQSVNTTDSAVRV 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV CQ ERSQ +N+ +A  +LRAKLYE+ LQ+++    I E+ K+++G G   
Sbjct: 244 THIPTGIVVTCQDERSQIQNRERALKILRAKLYEMALQEQQ--REIAETRKSQVGTGERS 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +      +VLDGDLD+ + A +   +
Sbjct: 302 ERIRTYNF-PQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALILNDQ 346


>gi|261363763|ref|ZP_05976646.1| peptide chain release factor 1 [Neisseria mucosa ATCC 25996]
 gi|288568341|gb|EFC89901.1| peptide chain release factor 1 [Neisseria mucosa ATCC 25996]
          Length = 358

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 121/350 (34%), Positives = 178/350 (50%), Gaps = 10/350 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +       RL  +      P    ++   + L RE   L   +   +  Q    D  
Sbjct: 4   SILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQSDLA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGT 128
              E+  + +             + K++    + + L       D  + ++EV AG GG 
Sbjct: 64  DAEEMLSDPE-MKDFATEEIEAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTGGD 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G H
Sbjct: 123 EAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDS
Sbjct: 183 RVQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDS 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG 
Sbjct: 243 AVRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGS 300

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G    +IR+Y   P   V D R N+       V+DGDL++   A +A  +
Sbjct: 301 GDRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQ 349


>gi|170759975|ref|YP_001785502.1| peptide chain release factor 2 [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169406964|gb|ACA55375.1| peptide chain release factor 2 [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 327

 Score =  242 bits (616), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 151/323 (46%), Positives = 216/323 (66%), Gaps = 1/323 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++P+ W N+ EA+ +  E ++L + +     +++ + D + L E+ L E+D  + +E  
Sbjct: 1   MQNPNFWNNIKEAQKITSEEKYLKDKLIKYNHLRNTIEDIISLCEM-LSEEDDDMKKEII 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              + IK E +  + E+LLSGE D N+  + +H+G GGT++QDW +ML RMYTRWAEK  
Sbjct: 60  SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  + +++ + E+AGIKS TL I G   YG+LKGE+G+HRLVRISP+++N +R TSF+SI
Sbjct: 120 FSIKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASI 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + D  EIEI   D +IDTYRA GAGGQHVN T+SAVRITHIPTG++VQCQ ERSQ
Sbjct: 180 EVLPELTDDQEIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK  A  +L++KL EL+ +  +E          ++GWG QIRSYV  PY +VKD RT 
Sbjct: 240 HTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTG 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E ++   V++GD++ F+   L 
Sbjct: 300 AETSNVDSVMNGDINMFITQYLK 322


>gi|15677534|ref|NP_274690.1| peptide chain release factor 1 [Neisseria meningitidis MC58]
 gi|20139351|sp|Q9JY93|RF1_NEIMB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|7226940|gb|AAF42034.1| peptide chain release factor 1 [Neisseria meningitidis MC58]
 gi|325134780|gb|EGC57417.1| peptide chain release factor 1 [Neisseria meningitidis M13399]
 gi|325199720|gb|ADY95175.1| peptide chain release factor 1 [Neisseria meningitidis H44/76]
 gi|325205597|gb|ADZ01050.1| peptide chain release factor 1 [Neisseria meningitidis M04-240196]
          Length = 358

 Score =  242 bits (616), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 120/349 (34%), Positives = 176/349 (50%), Gaps = 8/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +       RL  +      P    ++   + L RE   L   +   +  +    D  
Sbjct: 4   SILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQSDLA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E+  + +      E  +  +          Q   L     D  + ++E+ AG GG E
Sbjct: 64  DAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR
Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G
Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V+DGDL++   A +A  +
Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQ 349


>gi|110833384|ref|YP_692243.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2]
 gi|119361504|sp|Q0VS77|RF1_ALCBS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|110646495|emb|CAL15971.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2]
          Length = 361

 Score =  242 bits (616), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 122/346 (35%), Positives = 179/346 (51%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     DP +  N  + + L RE   +D  +   ++ Q  + D+     +
Sbjct: 9   LDKLADRFEELAGLLSDPDVISNQNQFRDLSREYAEIDPVVKCYRQYQQAVEDHGAAKAM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +     +         Q   L     D  + +LEV AG GG E+  
Sbjct: 69  QDDSDADMREMGAEEARDAQERMEALAAELQKLMLPKDPRDGANVFLEVRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++A++R +K E +   +GE  G K     + G   Y  +K E G HR+ R
Sbjct: 129 FAGDLFRMYSKYADQRGWKVEMVSASEGEHGGYKEVIARVIGDGVYSRMKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ +    +D  +I+I   D RIDTYR+SGAGGQHVNTTDSAVRI
Sbjct: 189 VPATESQGRIHTSACTVAIMAEAEDLGDIKIRTEDLRIDTYRSSGAGGQHVNTTDSAVRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTGVVV+CQ ERSQHKNKA+A ++L AKLY+   Q+    A      K+ +G G   
Sbjct: 249 THLPTGVVVECQDERSQHKNKARAMSLLSAKLYDA--QQNAAHAEQAAERKSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+     +++++GDLD+ + A LA  +
Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYRLNEIVEGDLDEILGALLAEYQ 351


>gi|116629958|ref|YP_815130.1| protein chain release factor B [Lactobacillus gasseri ATCC 33323]
 gi|238854078|ref|ZP_04644428.1| peptide chain release factor 2 [Lactobacillus gasseri 202-4]
 gi|282851440|ref|ZP_06260805.1| peptide chain release factor 2 [Lactobacillus gasseri 224-1]
 gi|311110410|ref|ZP_07711807.1| peptide chain release factor 2 [Lactobacillus gasseri MV-22]
 gi|116095540|gb|ABJ60692.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus
           gasseri ATCC 33323]
 gi|238833312|gb|EEQ25599.1| peptide chain release factor 2 [Lactobacillus gasseri 202-4]
 gi|282557408|gb|EFB63005.1| peptide chain release factor 2 [Lactobacillus gasseri 224-1]
 gi|311065564|gb|EFQ45904.1| peptide chain release factor 2 [Lactobacillus gasseri MV-22]
          Length = 332

 Score =  242 bits (616), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 151/324 (46%), Positives = 209/324 (64%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W +  +A+ L+ E   +       K ++++  D    LEL   + D  + +E S
Sbjct: 1   MAEPGFWDDQEQAQSLINETNRMKEKSENFKRLEEKFEDAQTALELLKADPDPELSEELS 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             +  +       +   LLS + D ++A +E+H GAGGTE+ DWA+MLLRMY R+A    
Sbjct: 61  KEMFSLSQSFHDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAANHN 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
            K E  +   GEEAG+KS ++ I+G NA+G LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 LKFEIEDYEPGEEAGVKSVSVRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D SIE++I+  D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ
Sbjct: 181 EVIPEIDQSIEVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A NMLRAKL++LE +K+++     + ++ EIG+G QIRSYV  PY MVKD RTN
Sbjct: 241 LQNRETAMNMLRAKLFQLEEEKKKKQTEELKGNQKEIGFGSQIRSYVFHPYNMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E +  + V+DG LDDF+ A L  
Sbjct: 301 FETSDVNGVMDGKLDDFIYAYLQW 324


>gi|296313476|ref|ZP_06863417.1| peptide chain release factor 1 [Neisseria polysaccharea ATCC 43768]
 gi|296839995|gb|EFH23933.1| peptide chain release factor 1 [Neisseria polysaccharea ATCC 43768]
          Length = 358

 Score =  242 bits (616), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 121/349 (34%), Positives = 175/349 (50%), Gaps = 8/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +       RL  +      P    ++   + L RE   L   +   +  +    D  
Sbjct: 4   SILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQSDLA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E+  + +      E  +  +          Q   L     D  + ++EV AG GG E
Sbjct: 64  DAEEMLSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEVRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR
Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G
Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V+DGDL +   A +A  +
Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQ 349


>gi|189218067|ref|YP_001938709.1| protein chain release factor B [Methylacidiphilum infernorum V4]
 gi|189184925|gb|ACD82110.1| Protein chain release factor B [Methylacidiphilum infernorum V4]
          Length = 337

 Score =  242 bits (616), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 170/326 (52%), Positives = 216/326 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  WQ   +A+  +   + L    S  K + +R  D   L +L  E +D S+ +E  
Sbjct: 1   MASPSFWQTPEKAEKALSRSKELKAKFSDYKTLVNRFKDIEALYDLLQESEDPSLEKELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             +      ++  + + +LS   D  +A L VH+GAGGTE+ DWA MLLRMY R+AE+  
Sbjct: 61  QEINAYSDLLDSIEVKLVLSDPMDQKNAILSVHSGAGGTEACDWAAMLLRMYQRYAERHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK   ++I  GEEAGIKSA+LLI G  AYG+LK E+GVHRLVRISP+++  +R TSF+S+
Sbjct: 121 FKVSLIDILPGEEAGIKSASLLISGSYAYGYLKAERGVHRLVRISPFNAQGKRQTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V   VD+SIEIEI ESD RID +R+ G GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ
Sbjct: 181 DVVAEVDESIEIEIKESDLRIDVFRSGGHGGQGVNTTDSAVRITHLPTGIVVVCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NKA A  +LR++LYELE  K+          K EIGWGRQIRSYVLQPY+MVKDLRT 
Sbjct: 241 IQNKATAMKILRSRLYELEKDKKRAEMERIYGQKGEIGWGRQIRSYVLQPYKMVKDLRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355
           + KT   +VLDGDLD F+ A L  KK
Sbjct: 301 VTKTQVEEVLDGDLDSFIWAYLLGKK 326


>gi|254422250|ref|ZP_05035968.1| peptide chain release factor 2 [Synechococcus sp. PCC 7335]
 gi|196189739|gb|EDX84703.1| peptide chain release factor 2 [Synechococcus sp. PCC 7335]
          Length = 345

 Score =  242 bits (616), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 139/336 (41%), Positives = 212/336 (63%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              ++  L   +  P  W     A+  ++E       +  ++     L D+  +LEL   
Sbjct: 1   MNAKIKDLEQLSAQPDFWDEQESAQKSLQELNDYKANLDQVEGWSTSLEDSEAILELLDL 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D S+L E    + R+  E++  + + LLSG  D   A L ++AGAGGT++QDW+ MLL
Sbjct: 61  EQDESLLLEAESTVNRLSKELDQWELQQLLSGPYDKAGAVLTINAGAGGTDAQDWSEMLL 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTRW+E+  ++ + +E  +G+EAG+KS T+ + G  AYG+LKGE+G HRLVRISP+++
Sbjct: 121 RMYTRWSEQNGYQFKLIEKSEGDEAGLKSVTMEVYGRYAYGYLKGEKGTHRLVRISPFNA 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           N +R TSF+ + V P++D  +E++I + D  I T R+ GAGGQ+VN  ++AVRITH+PT 
Sbjct: 181 NGKRQTSFAGVEVMPILDQKVELDIPDKDLEIKTSRSGGAGGQNVNKVETAVRITHLPTS 240

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           + V+C QERSQ +NK +A  +L +KL  +  ++R +          E  WG QIR+YV  
Sbjct: 241 ISVRCTQERSQLQNKEKAMALLTSKLLVIAQEQRTQAIADIRGDMVEAAWGNQIRNYVFH 300

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           PYQMVKDLRT++E T+  DV++GDL+ F++A L  +
Sbjct: 301 PYQMVKDLRTSVETTAVDDVMNGDLEAFIQAYLHQE 336


>gi|188526975|ref|YP_001909662.1| peptide chain release factor 2 [Helicobacter pylori Shi470]
 gi|238691887|sp|B2US00|RF2_HELPS RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|188143215|gb|ACD47632.1| peptide chain release factor 2 [Helicobacter pylori Shi470]
 gi|308061460|gb|ADO03348.1| peptide chain release factor 2 [Helicobacter pylori Cuz20]
          Length = 363

 Score =  242 bits (616), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 241/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L ++  L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESTELFELAQNDNDEVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSTAKN--EE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362


>gi|317179435|dbj|BAJ57223.1| peptide chain release factor 2 [Helicobacter pylori F30]
          Length = 363

 Score =  242 bits (616), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 241/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L ++  L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESAELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSTAKN--EE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362


>gi|261839033|gb|ACX98798.1| peptide chain release factor 2 [Helicobacter pylori 52]
          Length = 363

 Score =  242 bits (616), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 241/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L ++  L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESAELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362


>gi|160878415|ref|YP_001557383.1| peptide chain release factor 2 [Clostridium phytofermentans ISDg]
 gi|160427081|gb|ABX40644.1| peptide chain release factor 2 [Clostridium phytofermentans ISDg]
          Length = 333

 Score =  242 bits (616), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 161/324 (49%), Positives = 220/324 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E+P+ W +  +++  M+E ++L + +S    ++ +  D L LLE+  EE+D  ++ E  
Sbjct: 1   MEEPNFWDSQEKSQAYMKELKNLKDIVSEYNGLKQQYDDILTLLEMGYEEEDPDLIPEIE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L++    +E  +  +LLS E D ++A L +HAGAGGTES DWA+ML RMY RWA+K+ 
Sbjct: 61  QELEQFIDALEELRLNTLLSDEYDKDNAILTLHAGAGGTESCDWASMLYRMYQRWADKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           + TE L+  DGEEAG KS TL I G NAYG LK E+GVHRLVRISP+++  +R TSF S 
Sbjct: 121 YTTELLDFLDGEEAGYKSVTLQINGLNAYGHLKSERGVHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ I+IEI++ D RIDTYR+SGAGGQHVN T SA+RITHIPTG VVQCQ ERSQ
Sbjct: 181 DVMPDIEEDIDIEINDDDLRIDTYRSSGAGGQHVNKTSSAIRITHIPTGTVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK +A  ML+AKLY  + ++     +       +I +G QIRSYVLQPY MVKD RTN
Sbjct: 241 FQNKDKAMQMLKAKLYLKKKEENAAKESGIRGEIRDINFGNQIRSYVLQPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            + ++   VLDG++D F+ A L  
Sbjct: 301 TDVSNALGVLDGNIDPFINAYLKW 324


>gi|299768411|ref|YP_003730437.1| peptide chain release factor 2 [Acinetobacter sp. DR1]
 gi|298698499|gb|ADI89064.1| peptide chain release factor 2 [Acinetobacter sp. DR1]
          Length = 310

 Score =  242 bits (616), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 167/307 (54%), Positives = 223/307 (72%), Gaps = 1/307 (0%)

Query: 47  RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
           +E+  L+N I+ +  +  +L D   +L+LA+E DD S+L++    L   + E+   +F  
Sbjct: 3   KEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELSAAEDELAKLEFRR 62

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S   D N  Y+E+ +G+GGTE+QDWA+MLLRMY RW E+  FK E +E+ DG+ AGIK
Sbjct: 63  MFSNPMDPNPCYVEIQSGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAGIK 122

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+ S
Sbjct: 123 SATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDINPS 182

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R DTYRASGAGGQH+N TDSAVR+TH PTG+VV CQ +RSQH N+  AW  LRA+LYE
Sbjct: 183 DVRTDTYRASGAGGQHINKTDSAVRLTHTPTGIVVACQNQRSQHANRDHAWKQLRARLYE 242

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LE+QKR E A   E SK++IGWG QIRSYVL     +KDLRT +E ++   VLDGDLD F
Sbjct: 243 LEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDD-SRIKDLRTGVENSNTGAVLDGDLDRF 301

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 302 IEASLKQ 308


>gi|114565810|ref|YP_752964.1| peptide chain release factor 2 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114336745|gb|ABI67593.1| bacterial peptide chain release factor 2 (bRF-2) [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
          Length = 334

 Score =  242 bits (616), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 152/328 (46%), Positives = 217/328 (66%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             KT   + W    EA+ ++++   L   ++  KE+         +LE+A EE+D ++ Q
Sbjct: 2   QKKTLQENFWSERKEAQEILKQISKLQENLNLYKELMGTAQYLNDILEMAEEENDETLWQ 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E+   L  ++      +   L SG  D ++A + +HAGAGGTE+QDW  +L RMY+RWAE
Sbjct: 62  ESVRELLALQKRFREFELLVLFSGPHDYSNAIVSLHAGAGGTEAQDWVEILFRMYSRWAE 121

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
              +  E L+  DG+EAGIKS T L++GP A+G LK E+GVHRL+RISP+DS+ RRHTSF
Sbjct: 122 NSSYSIEVLDFLDGDEAGIKSVTFLVRGPYAFGKLKCEEGVHRLIRISPFDSSGRRHTSF 181

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S+ V P +++ IE+ I+  D R+DTYR+SGAGGQH+N TDSAVRITH+P+G+VVQCQ E
Sbjct: 182 ASLSVLPEINEDIEVLINVEDLRVDTYRSSGAGGQHINKTDSAVRITHLPSGIVVQCQNE 241

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQH N+  A  +L+AKLY L+ ++ ++     +    EI WG QIR+Y L P+ ++KD 
Sbjct: 242 RSQHANRLAAMKILQAKLYALKQKEAQDKLQSIKGDYKEIAWGSQIRTYTLNPFNLIKDH 301

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           RTN+E  +   VLDG+LDD + A L  K
Sbjct: 302 RTNMEIGNVQAVLDGELDDLIFACLHWK 329


>gi|124007003|ref|ZP_01691832.1| peptide chain release factor 2 [Microscilla marina ATCC 23134]
 gi|123987456|gb|EAY27176.1| peptide chain release factor 2 [Microscilla marina ATCC 23134]
          Length = 324

 Score =  242 bits (616), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 151/322 (46%), Positives = 210/322 (65%), Gaps = 2/322 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
            P  W +   A+ +++E + +        ++Q+   +  IL E     +           
Sbjct: 4   QPEFWDDPKAAEKVLKEIKSIKIWTERFDKVQNLWDELEILNEFLEAGEGSETEVTNL-- 61

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
             +++  ++  +F+ +LS E D  +A +E++ GAGGTES DWA ML+RMY  W EK  +K
Sbjct: 62  FSKLEKALDELEFQKMLSDEEDPLNALIEINPGAGGTESMDWAGMLMRMYIMWGEKNNYK 121

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
              +    GE AG+KS TL I+G  AYG LK E GVHRLVRISP+DS  RRHTSF+S++ 
Sbjct: 122 VREVNYQAGEAAGVKSVTLEIEGDFAYGHLKAEIGVHRLVRISPFDSGGRRHTSFASVFA 181

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           YPVVDD+IEIEIS +D   DT+RA GAGGQ+VN  ++AVR+ H P+G++V+CQQERSQ +
Sbjct: 182 YPVVDDTIEIEISPADIEWDTFRAGGAGGQNVNKVETAVRLKHKPSGIIVECQQERSQLQ 241

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           NK +A  MLR++LY++E++K+ E     E SK  I +G QIRSYVL PY+MVKDLRT  E
Sbjct: 242 NKDKAMKMLRSRLYQVEMEKKNEARAKVEGSKKRIDFGSQIRSYVLHPYKMVKDLRTGHE 301

Query: 332 KTSPSDVLDGDLDDFMKATLAI 353
           ++   +VLDGDL D+MKA L  
Sbjct: 302 RSDVQNVLDGDLSDYMKAFLMQ 323


>gi|319779045|ref|YP_004129958.1| Peptide chain release factor 1 [Taylorella equigenitalis MCE9]
 gi|317109069|gb|ADU91815.1| Peptide chain release factor 1 [Taylorella equigenitalis MCE9]
          Length = 355

 Score =  242 bits (616), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 189/344 (54%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QRL  ++    +P +  ++   + L RER  +D  +   KE +    D    +E+
Sbjct: 5   LEQLSQRLIEVDALLAEPDVADDMDRFRKLSRERSEIDPVVELFKEFEAAEGDLNTAVEM 64

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   +  +E     +RI+   +  Q E L     D    +LE+ AG GG ES  + 
Sbjct: 65  MSDPDLKEMGEEEMKSTKERIEQLEQKLQLELLPKDPDDGRSVFLEIRAGTGGDESAIFT 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE++ +K E +  +  E  G +     I+G   YG LK E G HR+ R+ 
Sbjct: 125 GDLFRMYSRYAEQKGWKVELMSENPSELGGYREVIARIEGDGVYGQLKYESGAHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  E+ ++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 185 ETESQGRVHTSACTVAVLPEADELAEVVLNPADLRIDTFRASGAGGQHINKTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+V +CQ +RSQHKNKA+A ++L A++ +++ Q+++  +      K+ +G G    +
Sbjct: 245 LPTGIVAECQDDRSQHKNKARAMSVLAARINDIKRQEQQ--SKEAAERKSLVGSGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       +++G LD+   A ++ ++
Sbjct: 303 IRTYNY-PQGRVTDHRINLTLYKLQQIMEGSLDELTNALISERQ 345


>gi|317010450|gb|ADU84197.1| peptide chain release factor 2 [Helicobacter pylori SouthAfrica7]
          Length = 363

 Score =  242 bits (616), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 176/352 (50%), Positives = 243/352 (69%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +D L +++ L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KDSLDESVELFELAQNDNDEVTLSLLYEEALVLEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NESGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362


>gi|325123846|gb|ADY83369.1| peptide chain release factor 2 [Acinetobacter calcoaceticus PHEA-2]
          Length = 310

 Score =  242 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 168/307 (54%), Positives = 224/307 (72%), Gaps = 1/307 (0%)

Query: 47  RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
           +E+  L+N I+ +  +  +L D   +L+LA+E DD S+L++    L   + E+   +F  
Sbjct: 3   KEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELGAAEDELAKLEFRR 62

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S   D N  Y+E+ +G+GGTE+QDWA+MLLRMY RW E+  FK E +E+ DG+ AGIK
Sbjct: 63  MFSNPMDPNPCYVEIQSGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAGIK 122

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+ S
Sbjct: 123 SATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDINPS 182

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R DTYRASGAGGQH+N TDSAVR+THIPTG+VV CQ +RSQH N+  AW  LRA+LYE
Sbjct: 183 DVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQLRARLYE 242

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LE+QKR E A   E SK++IGWG QIRSYVL     +KDLRT +E ++   VLDGDLD F
Sbjct: 243 LEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDD-SRIKDLRTGVENSNTGAVLDGDLDRF 301

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 302 IEASLKQ 308


>gi|218885659|ref|YP_002434980.1| peptide chain release factor 2 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|65736690|dbj|BAD98502.1| peptide release factor 2 [Desulfovibrio vulgaris]
 gi|218756613|gb|ACL07512.1| Peptide chain release factor 2 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 376

 Score =  242 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 157/349 (44%), Positives = 215/349 (61%), Gaps = 5/349 (1%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
             L G  D      RL  +  +   P  W N  +   +++E+  L+  I+ ++ ++    
Sbjct: 19  ASLWGRLDLAGNRNRLDEIERQLSSPDAWNNPEKLTPVLQEKSQLEGEITRLERLETCRR 78

Query: 68  DNLILLELALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           D    L LA EE+      + +          ++  ++  +   LLSG+ D   A +E+H
Sbjct: 79  DVTEWLTLAEEEEAAGEPGQEALESLAEQVTVLQNLLQETEMNMLLSGKEDRMPAIVEIH 138

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTE+QDWA ML+RMY RWA+    K E L+   G+EAG+KS TL + GPNAYG LK
Sbjct: 139 PGAGGTEAQDWAEMLVRMYLRWADTHDMKAEYLDYLAGDEAGVKSVTLRMAGPNAYGLLK 198

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE+G+HRL+RISP+DS+ RRHTSF+S+ V P V   I ++I E+D RID +R+SG GGQ 
Sbjct: 199 GEKGIHRLIRISPFDSSGRRHTSFASVDVIPDVGQEITVDIKETDLRIDIFRSSGPGGQS 258

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT SAVRITH+PTG+  QCQ E+SQH N+  A  +LRA+LYELEL+K EE      + 
Sbjct: 259 VNTTSSAVRITHLPTGISAQCQNEKSQHSNRDTAMQILRARLYELELRKLEEEKKAQYAG 318

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K  IG+G QIR+Y LQPY++VKD RTN E      VLDG +D  ++  L
Sbjct: 319 KDAIGFGSQIRTYTLQPYRLVKDHRTNTEIGDVEAVLDGRIDQLLRDYL 367


>gi|308183967|ref|YP_003928100.1| peptide chain release factor 2 [Helicobacter pylori SJM180]
 gi|308059887|gb|ADO01783.1| peptide chain release factor 2 [Helicobacter pylori SJM180]
          Length = 363

 Score =  242 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 242/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPERIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L +++ L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESVELFELAQNDNDEVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NESGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362


>gi|150388626|ref|YP_001318675.1| peptide chain release factor 2 [Alkaliphilus metalliredigens QYMF]
 gi|149948488|gb|ABR47016.1| peptide chain release factor 2 [Alkaliphilus metalliredigens QYMF]
          Length = 329

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 150/324 (46%), Positives = 212/324 (65%), Gaps = 1/324 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
               + W +  +A+ +++E + + + I   + + D+  +  +++    E D     +   
Sbjct: 1   MSQENFWDDQDKAQEILKEAKMVKDRIEDYQSVIDQTEEVQMMITFTEEGDQTFEKELKE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              Q     V+  +  +LL G+ D     L +HAG GG ++QDWA ML+RMY+RWAE + 
Sbjct: 61  TINQLDV-RVKTMKTATLLQGQYDRFSVILSIHAGTGGLDAQDWAKMLMRMYSRWAEAKG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  E L++    EAGIKS T LI+G NAYG+LKGE+GVHRLVRISP+DS+ +RHTSF+S+
Sbjct: 120 YGVEILDLIQDPEAGIKSVTFLIEGINAYGYLKGEKGVHRLVRISPFDSSGKRHTSFASV 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDSIE+EI+ +D +IDTYRASGAGGQHVN TDSAVRITHIPTG+VVQCQ +RSQ
Sbjct: 180 DVMPELDDSIEVEINPNDLKIDTYRASGAGGQHVNKTDSAVRITHIPTGLVVQCQNQRSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H N+  +  ML+AKL EL+ ++++E     +   ++I WG QIRSYV  PY + KD RTN
Sbjct: 240 HSNRETSMKMLKAKLIELKEREQKEKIEDLQGEYSQIAWGSQIRSYVFNPYNLAKDHRTN 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  +   V+DGD+D F+   L  
Sbjct: 300 TEMGNIQSVMDGDIDLFINEYLTW 323


>gi|162449904|ref|YP_001612271.1| peptide chain release factor 2 [Sorangium cellulosum 'So ce 56']
 gi|161160486|emb|CAN91791.1| peptide chain release factor 2 [Sorangium cellulosum 'So ce 56']
          Length = 350

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 141/329 (42%), Positives = 214/329 (65%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           L  L   T     W +  +A+ ++R+R  +++ +   + +   + D    LEL   E D 
Sbjct: 2   LQDLTQTTLSSGFWNDQEKAQAVLRKRAQVESKLEVAQRLGREIEDLAEYLELGAAEGDE 61

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
            ++ +       I   +   + + +LSG AD  +A + +H GAGGT+++DWA+MLLRMY 
Sbjct: 62  GVIADADAQADAIAGRLRKVELDRMLSGPADRGNAIVSIHPGAGGTDAKDWASMLLRMYL 121

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           R+ E+R +KTE ++  DG+EAGI + TL + G  AYG+L+ E GVHRLVR+SP++++  R
Sbjct: 122 RFCERRGYKTEIIDYQDGDEAGIDAVTLTVSGDAAYGYLRSEAGVHRLVRMSPFNADHTR 181

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
            T+F+++ V P  DD I I+++E D  I T RA G GGQ+VN  ++AVR+ HIPTG+ + 
Sbjct: 182 QTAFAAVEVTPDSDDEINIQVNEKDIEITTMRAGGKGGQNVNKVETAVRLRHIPTGLNIV 241

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
           C+ ERSQH+N+A A  +L+AKLYE+ELQKRE       ++K+ I +G QIR+YVL PY++
Sbjct: 242 CRAERSQHQNRAMAMKVLKAKLYEMELQKREAEVQAYNAAKSSINFGSQIRNYVLAPYRL 301

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           VKD+RT+ E T    VLDGDL+ F++A L
Sbjct: 302 VKDVRTSTEATDVDAVLDGDLEGFIEAYL 330


>gi|291547175|emb|CBL20283.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus sp.
           SR1/5]
          Length = 358

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 121/351 (34%), Positives = 191/351 (54%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D+ + R   L  +  +P +  +    + LM+E+  L   +   KE +        
Sbjct: 1   MFDKLDDLLVRFEELLNELGEPGVTDDPAHFQKLMKEQSDLQPIVDAYKEYKKNKETIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
            L +   E D  + +   + L   K  VE  + E           DS +  +E+  GAGG
Sbjct: 61  SLSMLESEKDEEMREMLKEELSDAKKRVEELEHELKILLLPKDPNDSKNVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY ++AE R++KTE L +++    G K  T +IKG  AY  LK E GV
Sbjct: 121 DEAALFAAEIYRMYVKYAESRRWKTEMLSLNENGIGGFKEVTFMIKGEGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ + P   + I+  +  ++C+ D +RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTCTVAIMP-EAEEIDFHLDLNECKFDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+ CQ E+SQ KNK +A  +LR++LYE+EL K+ +     E+ +++IG
Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALRVLRSRLYEMELAKQHD--AEAEARRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +      ++L+GDLD+ + + +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHRLENILNGDLDEIIDSLIAADQ 347


>gi|320103729|ref|YP_004179320.1| peptide chain release factor 2 (bRF-2) [Isosphaera pallida ATCC
           43644]
 gi|319751011|gb|ADV62771.1| bacterial peptide chain release factor 2 (bRF-2) [Isosphaera
           pallida ATCC 43644]
          Length = 334

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 153/325 (47%), Positives = 205/325 (63%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +   AK  + E + L+  +   + +  +  D   L+ELA E  D S+  E  
Sbjct: 1   MNAPDFWNHQDRAKATIAEIKTLNAVLKPYEALVKQAEDLQALVELADEAGDDSLDDEID 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              Q+ +   +  + +S+LSG  D  +A+LE+H G GGTE+ DW+ MLLRMY  WAE + 
Sbjct: 61  QATQKAREAFDKFELQSMLSGMNDHCNAFLEIHPGEGGTEACDWSEMLLRMYMMWAESKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K E +   DG  AGI+SA L I G  A+G+LKGE GVHRLVRISP+D+  RR TSF+S+
Sbjct: 121 YKVELISREDGGVAGIQSAQLKISGDYAFGYLKGEAGVHRLVRISPFDAAGRRQTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DD+IEIEI + D + D +R  G GGQH N T+S VR TH+PTGVV + + ERSQ
Sbjct: 181 DVTPEIDDTIEIEIRDCDLKRDVFRCGGPGGQHQNKTESGVRYTHLPTGVVAESRSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N   A  +L+AKL  LE +KRE  +      K++IG+G QIRSYVLQPY +VKDLRT 
Sbjct: 241 FQNDDLALKLLKAKLIRLEEEKREAESIKAYDDKSKIGFGSQIRSYVLQPYTLVKDLRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
            E  +P  VLDGDLD F+ A L +K
Sbjct: 301 YETGNPRAVLDGDLDGFINAYLRMK 325


>gi|150021425|ref|YP_001306779.1| peptide chain release factor 2 [Thermosipho melanesiensis BI429]
 gi|166225118|sp|A6LN93|RF2_THEM4 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|149793946|gb|ABR31394.1| peptide chain release factor 2 [Thermosipho melanesiensis BI429]
          Length = 369

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 166/350 (47%), Positives = 235/350 (67%), Gaps = 2/350 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ ++   +  +F  ++  + L  L     +   W +   AK + +  Q +   I  + +
Sbjct: 12  EVKKRYEDIVKVFHPEDKKKELEELEKLMGESDFWNDQKRAKEISQNAQRIRKIIDDMVD 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+++L    +   L L E+D + L      +  I+ +V+  + E +L+ + DS++AYL +
Sbjct: 72  IENKLE--DLEAGLELLEEDATFLDTIKQLIDDIERKVKTFELELILNEKFDSSNAYLSI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTESQDWA+MLLRMY RWAE+R F  + ++   GEEAGIKSA L IKG   YG+L
Sbjct: 130 HPGAGGTESQDWASMLLRMYMRWAERRGFDVQIVDYQPGEEAGIKSAMLYIKGEYVYGYL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+GVHRLVRISP+D+N RRHTSF+S+ V P ++D I++EI+  D RIDTYRASGAGGQ
Sbjct: 190 KYERGVHRLVRISPFDANKRRHTSFASVNVMPEIEDDIDVEINPEDLRIDTYRASGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN T+SAVRITHIPTG+VV CQ ERSQ +NK  A  +L+A+LY+LEL+KR++     + 
Sbjct: 250 YVNKTESAVRITHIPTGIVVTCQTERSQLQNKETAMKVLKARLYQLELEKRQKQLEEIQG 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +I WG QIRSYV QPY MVKD RTN+E  +   V+DGD+D F+++ L
Sbjct: 310 ELKDISWGNQIRSYVFQPYTMVKDHRTNVETGNIDAVMDGDIDIFIESEL 359


>gi|261837620|gb|ACX97386.1| peptide chain release factor RF-2 [Helicobacter pylori 51]
          Length = 363

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 241/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L ++  L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESTELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362


>gi|218779410|ref|YP_002430728.1| peptide chain release factor 2 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218760794|gb|ACL03260.1| peptide chain release factor 2 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 327

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 148/322 (45%), Positives = 222/322 (68%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
                 W +  +   +++ER  + + +   +++ + L +  +LLEL +EE+D   ++E  
Sbjct: 1   MAQDGFWDSPDKNTAILKERTSITSLVEGWEKLAEELSEAEVLLELGVEEEDGQTIEEAR 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L +I+  ++      +L GE D+ +A + ++AGAGGT++QDWA MLLRMY RW E++ 
Sbjct: 61  QHLVKIEKGIDKLSLSRMLDGEDDARNAIVAINAGAGGTDAQDWAEMLLRMYLRWVEQKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F    ++   G+EAG+K  T  + G  AYG+LK E+GVHRLVRISP++SN +R TSF+S+
Sbjct: 121 FSYSIIDYQPGDEAGVKGVTFTVTGDYAYGYLKTEEGVHRLVRISPFNSNGKRQTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            VYP +D  I ++++E D RID +RASGAGGQHVN T SAVRI HIPTG+VVQCQQE+SQ
Sbjct: 181 AVYPEIDQEIVVDVNEKDLRIDVFRASGAGGQHVNKTSSAVRILHIPTGIVVQCQQEKSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H+N+  A  +L+A+LY++E +++++       +K EIG+G QIRSYVL PYQMVKD R N
Sbjct: 241 HRNRDLAMKVLKARLYQVEQEQQQKQMQDNYEAKEEIGFGNQIRSYVLHPYQMVKDHRIN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
           ++  + + VLDGD+D F++A L
Sbjct: 301 MDVGNVNAVLDGDIDPFIEAVL 322


>gi|224543374|ref|ZP_03683913.1| hypothetical protein CATMIT_02574 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523701|gb|EEF92806.1| hypothetical protein CATMIT_02574 [Catenibacterium mitsuokai DSM
           15897]
          Length = 371

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 148/360 (41%), Positives = 207/360 (57%), Gaps = 7/360 (1%)

Query: 2   KLSRQLNCLGGLFD-------WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN 54
           ++   L     L D        +   + +  L  +T D H W +   A  +      +  
Sbjct: 5   EIKNGLEDARLLLDQLYVSANIEVLKREIEGLTVQTMDEHFWDDQAHATKVYAHLNEMKK 64

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
                  ++    + + + E   + +D   +    ++       ++  +   L   E D 
Sbjct: 65  VADTDASLEASYKELMEVYEYVKDTEDPDFMASLEEDYMTFHKNLDEFEKTLLFDQEYDH 124

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
           ++A +E+H GAGGTESQDWA ML+RMY R+ EK+ +K +  +   G+EAG+KS ++   G
Sbjct: 125 SNAIVEIHPGAGGTESQDWAEMLMRMYIRYGEKKGWKVDVDDYLAGDEAGLKSCSIRFTG 184

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
            NAYG L+ E+GVHRLVRISP+DS+ RRHTSF+S+ V P +DD IEI I   + RIDTYR
Sbjct: 185 YNAYGHLRAEKGVHRLVRISPFDSSKRRHTSFASVEVSPELDDDIEITIDPKNLRIDTYR 244

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASGAGGQH+N TDSAVRITHIPT  VV CQ +RSQ +N+ QA  ML++KLY L  ++  E
Sbjct: 245 ASGAGGQHINKTDSAVRITHIPTNTVVSCQSQRSQLQNREQAMLMLKSKLYLLMQEEHAE 304

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  +  K  I WG QIRSYVL PY MVKD R+  E      +LDG+LDD + A L  +
Sbjct: 305 KLSEIQGEKKNIEWGSQIRSYVLHPYSMVKDNRSGYESNDQKKILDGELDDLIYAYLRSQ 364


>gi|308063032|gb|ADO04919.1| peptide chain release factor 2 [Helicobacter pylori Sat464]
 gi|317176986|dbj|BAJ54775.1| peptide chain release factor 2 [Helicobacter pylori F16]
          Length = 363

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 241/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L ++  L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESTELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSTAKN--EE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362


>gi|261379805|ref|ZP_05984378.1| peptide chain release factor 1 [Neisseria subflava NJ9703]
 gi|284797490|gb|EFC52837.1| peptide chain release factor 1 [Neisseria subflava NJ9703]
          Length = 358

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 122/349 (34%), Positives = 175/349 (50%), Gaps = 8/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +       RL  +      P    ++   + L RE   L   +   +  Q    D  
Sbjct: 4   SILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQSDLA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E+  + +      E  +  +          Q   L     D  + ++EV AG GG E
Sbjct: 64  DAEEMLSDPEMKDFAAEEIEAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR
Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV+CQ  RSQH NKAQA  +L A L +   QKRE  A      K+ IG G
Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAALLNDA--QKREAQAKEAAERKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V+DGDL++   A +A  +
Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQ 349


>gi|260889274|ref|ZP_05900537.1| peptide chain release factor 2 [Leptotrichia hofstadii F0254]
 gi|260860685|gb|EEX75185.1| peptide chain release factor 2 [Leptotrichia hofstadii F0254]
          Length = 352

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 167/353 (47%), Positives = 225/353 (63%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +   L   GG+FD +N    +  L  KT +   W N   ++ +++        +     +
Sbjct: 1   MKLTLKKSGGIFDIENLKNEIDGLEKKTFEADFW-NSENSQEILKAISTNKKLLEEYSSL 59

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
                D   ++E     D+    +      Q +K E++  + + LL  E D N+A L ++
Sbjct: 60  NGLFEDVSTIIEFIEMGDNSFENE-LEQKAQDLKNEIDNFKTKLLLDEEYDMNNAILTIN 118

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTE+ DWA ML RMY RWA +  FK E L+   GEEAGIKS TL IKG  AYG+LK
Sbjct: 119 SGAGGTEACDWAEMLYRMYDRWANRHDFKVEILDSLAGEEAGIKSVTLNIKGNYAYGYLK 178

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE+GVHRLVRISP+DSN+RRHTSF+++ V P ++D +EI+I   D +IDTYRASGAGGQH
Sbjct: 179 GEKGVHRLVRISPFDSNARRHTSFAAVNVTPEIEDDVEIDIRTEDLKIDTYRASGAGGQH 238

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPT  VV CQ ERSQ KN+  A  +L++KL+ELEL+KRE+     + +
Sbjct: 239 VNTTDSAVRITHIPTNTVVTCQNERSQLKNRETAMKILKSKLFELELEKREKEMAELKGT 298

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +++I WG QIRSYV QPY+MVKD RT  E+ +   V+DGD+D F+   L   K
Sbjct: 299 ESKIEWGSQIRSYVFQPYKMVKDHRTKAEEGNVEKVMDGDIDLFINEYLKYAK 351


>gi|312147930|gb|ADQ30589.1| peptide chain release factor 2 [Borrelia burgdorferi JD1]
          Length = 358

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 148/352 (42%), Positives = 216/352 (61%), Gaps = 4/352 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L +Q   +      +    ++     +    + W +   A+ +++ +  L N I   +E+
Sbjct: 8   LLKQAEDIWRKLCKNEIQAKIEKYEKEINQKNFWNDPKRAQEVIKAQSILKNKIDPWEEL 67

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            +++ D   L       ++             ++ + +     S    E D+N+A+L +H
Sbjct: 68  INKIKDLSDL---CEIAENEKDTNGLEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIH 124

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTE+ DW  ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK
Sbjct: 125 SGAGGTEACDWVAMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLK 183

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRL+RISP+D+  +RHTSF+S++V PV+DD IEI I   D RIDTYRASGAGGQH
Sbjct: 184 SEVGIHRLIRISPFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQH 243

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T SAVRITHI TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     + +
Sbjct: 244 VNKTSSAVRITHIETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDT 303

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K EI WG QIRSYV QPY +VKD RT  E ++ + V+DG++D+F++  L  K
Sbjct: 304 KKEISWGNQIRSYVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 355


>gi|291299376|ref|YP_003510654.1| peptide chain release factor 2 [Stackebrandtia nassauensis DSM
           44728]
 gi|290568596|gb|ADD41561.1| peptide chain release factor 2 [Stackebrandtia nassauensis DSM
           44728]
          Length = 376

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 147/353 (41%), Positives = 216/353 (61%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+  L  +  + D D      S L      P LW +   A+ +     ++ + ++ I+++
Sbjct: 13  LNSTLESVTAVLDLDALSVEKSELEAAAASPDLWDDTTHAQKVTSRLSYVQSELNRIEDL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L +LA  E+D + ++E S  L  +   +E  +  +LLSGE DS +A + + 
Sbjct: 73  RRRLDDAEVLWDLAQSEEDPAAVEEASKELAALSKAIEELEVRTLLSGEYDSREALISIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG +S D+A  L+RMY RWAE+  + TE  ++   EEAGIKSAT  +K P AYG L 
Sbjct: 133 SGAGGADSADFAEQLMRMYLRWAERHGYPTEVYDVSYAEEAGIKSATFAVKAPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HR+VRIS YD+  RR T+F+++ V PVV+ + +I+I + + R+D YR+SG GGQ 
Sbjct: 193 VEQGTHRVVRISKYDNQGRRQTAFAAVEVVPVVEQTDDIDIPDDEIRVDVYRSSGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+ TG+VV CQ ERSQ +N+A A  +L+AKL     ++     +    S
Sbjct: 253 VNTTDSAVRITHLETGIVVSCQNERSQLQNRATAMAVLKAKLLARRREEENAKIDELRGS 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +  WG Q+RSYV  PYQMVKDLRT  E  +   V DG++D  ++A +  +K
Sbjct: 313 -VQASWGEQMRSYVQHPYQMVKDLRTGWETANVMAVYDGEIDGLIEAGIRWRK 364


>gi|310659436|ref|YP_003937157.1| peptide chain release factor rf-1 [Clostridium sticklandii DSM 519]
 gi|308826214|emb|CBH22252.1| peptide chain release factor RF-1 [Clostridium sticklandii]
          Length = 356

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 115/351 (32%), Positives = 188/351 (53%), Gaps = 11/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +   ++   LN K  DP +  N    + LM+E   ++  +   +E +        
Sbjct: 1   MFDKIEFVEEKYKELNQKISDPEVINNQSLWQKLMKEHAEIEPVVMKYREYKTVKSQFEG 60

Query: 72  LLELALEEDDCSIL----QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             E+    +D  +      E S+  + ++   E  +   L     D  +  +E+ AGAGG
Sbjct: 61  AKEILESSNDEEMRELAKMELSELEESLEAVSEELRVLLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A +L RMY+ +A  +++K E +  +D    G K    +I G  AY  LK E GV
Sbjct: 121 DEAALFAGVLFRMYSMYASSKRWKVELMSSNDTGVGGYKEVVFMIIGKGAYSRLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P V++  E+E++ +D R+D +R+SG GGQ VNTTD
Sbjct: 181 HRVQRVPETESAGRIHTSTATVAVLPEVEEVGEVELNLNDVRVDVFRSSGNGGQSVNTTD 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+V+  Q E+SQ KNK +A+ +LRAKLY++EL+K      +    K+++G
Sbjct: 241 SAVRLTHVPTGIVISMQDEKSQLKNKEKAFKILRAKLYDIELEK--AQKEVARERKSQVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   + D R  +        L+GDLD+ + A +   +
Sbjct: 299 TGDRSERIRTYNY-PQGRITDHRIGVTLYKLDAFLNGDLDEMVDALITTDQ 348


>gi|303239757|ref|ZP_07326281.1| peptide chain release factor 1 [Acetivibrio cellulolyticus CD2]
 gi|302592694|gb|EFL62418.1| peptide chain release factor 1 [Acetivibrio cellulolyticus CD2]
          Length = 360

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 125/351 (35%), Positives = 194/351 (55%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68
           +FD    A  R   +N K  DP + +N  E + LM+E   L   +    E +     + D
Sbjct: 1   MFDRLQAAENRYEEMNHKLSDPAVIENQDEYRKLMKEHAELQELVGKYGEYKKVTQEIAD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              LL   L++D   +++      +   +   +  +   L     D  D  +E+  GAGG
Sbjct: 61  AKELLNDKLDKDFREMVEMELKEAEEGLEKIKKELKILLLPKDPNDEKDVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A +L RMYTR+AE+  +KTE L+ +  E  G K     I+G  A+  LK E GV
Sbjct: 121 EEAALFAGVLFRMYTRYAERCGWKTEMLDSNPTEIGGFKEVVFAIEGNGAFSKLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   ++N R HTS  ++ V P   + ++++I+ +D RIDTYRASGAGGQH+N TD
Sbjct: 181 HRVQRIPETEANGRIHTSTVTVAVLP-EVEEVDVDINPNDLRIDTYRASGAGGQHINKTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SA+RITHIPTG+VV CQ +RSQ+KNK +A  +LR+KLYE+  +++     I ++ K ++G
Sbjct: 240 SAIRITHIPTGLVVCCQDQRSQYKNKDKAMRVLRSKLYEIAQEQQNSE--IAQARKGQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   + D R  +       +L+GD+D+ + A +   +
Sbjct: 298 TGDRSERIRTYNY-PQGRMTDHRIGLTLYKLESILEGDMDEVIDALITTDQ 347


>gi|153814377|ref|ZP_01967045.1| hypothetical protein RUMTOR_00587 [Ruminococcus torques ATCC 27756]
 gi|317500091|ref|ZP_07958326.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331087685|ref|ZP_08336611.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145848773|gb|EDK25691.1| hypothetical protein RUMTOR_00587 [Ruminococcus torques ATCC 27756]
 gi|316898576|gb|EFV20612.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330409666|gb|EGG89102.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 356

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 116/351 (33%), Positives = 192/351 (54%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + R   +  + ++P +  + +  + LM+E+  L   +    E +    +   
Sbjct: 1   MFDRLEDLLIRYEEVMGELQEPGVADDPVRFRKLMKEQSDLAPIVEAYNEYKQCRQNIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   + L   +  VE  +       L     D  +  +E+ AGAGG
Sbjct: 61  SLAMLEEESDEEMRELAKEELSDSRKRVEELEQELKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +A+ R++KTE + +++    G K    +I G  AY  LK E GV
Sbjct: 121 DEAALFAAEIYRMYVHYADSRRWKTEMISLNENGIGGFKECVFMITGQGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ + P   + +++ I E D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAIMP-EAEEVDVVIDEKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLY+LEL+K++  A+  E+ +++IG
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLELEKQQ--ASEAEARRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+GDLD+ + + +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDTILNGDLDEIIDSLIAADQ 347


>gi|313667936|ref|YP_004048220.1| peptide chain release factor I [Neisseria lactamica ST-640]
 gi|313005398|emb|CBN86832.1| peptide chain release factor I [Neisseria lactamica 020-06]
          Length = 358

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 121/349 (34%), Positives = 175/349 (50%), Gaps = 8/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +       RL  +      P    ++   + L RE   L   +   +  +    D  
Sbjct: 4   SILEKLQQLGDRLEEVTHLLGQPEATSDIDNYRKLTREHAELSPVVEVFQHYRRAQSDLA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E+  + +      E  +  +          Q   L     D  + ++EV AG GG E
Sbjct: 64  DAEEMLSDPEMKDFAAEEIEAAKAKIDALDTELQKLLLPKDADDDKNIFIEVRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR
Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G
Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V+DGDL +   A +A  +
Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQ 349


>gi|300690281|ref|YP_003751276.1| peptide chain release factor RF-1 [Ralstonia solanacearum PSI07]
 gi|299077341|emb|CBJ49966.1| peptide chain release factor RF-1 [Ralstonia solanacearum PSI07]
          Length = 356

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 118/344 (34%), Positives = 180/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R+  +N          N+ + + L RE   L+  ++     +    D     EL
Sbjct: 5   LDQLAERIVEINALLAREDATANLDQYRKLTREHAELEPVVAQYAAWKQAEDDVATAQEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  +  ++     +          Q   L     D  + +LE+ AGAGG ES  +A
Sbjct: 65  LADPDMKAFAEDEIRAARERMTTLEAELQRLLLPRNPNDHRNIFLEIRAGAGGDESALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+++++ E +     +  G K     + G  AY  LK E G HR+ R+ 
Sbjct: 125 GDLLRMYTRYAERQRWQVELVSESASDLGGYKEVIARLVGEGAYSRLKFESGGHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D   +I+I+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 185 ATEAQGRIHTSACTVAVMPEADPLADIQINPADLRIDTFRASGAGGQHINKTDSAVRLTH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A+L +   Q+RE  A    + K+ IG G    +
Sbjct: 245 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKD--RQEREAQAKEASARKSLIGSGDRSDR 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++DGDLD+ + A  A  +
Sbjct: 303 IRTYNF-PQGRITDHRINLTLYKIDAIMDGDLDELLGALAAEHQ 345


>gi|261493250|ref|ZP_05989777.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype
           A2 str. BOVINE]
 gi|261496507|ref|ZP_05992887.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype
           A2 str. OVINE]
 gi|261307710|gb|EEY09033.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype
           A2 str. OVINE]
 gi|261311100|gb|EEY12276.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype
           A2 str. BOVINE]
          Length = 360

 Score =  241 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 181/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     D  +  +  + +   +E   L+  +      +    D      L
Sbjct: 9   LESLSERHEELQALLGDASIISDQDKFRAYSKEYSQLEEVVGTFNRWKKLNNDIEEAQLL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   +  E     +     +E   Q   L     D  +A+LE+ AG GG E+  +A
Sbjct: 69  LDDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+ E ++++ E +  ++ E+ G K   + I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ SD RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A  +L +++ ++E +++       ++ +  +G G +   
Sbjct: 249 IPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQ--ADTRRNLLGSGDRSDK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      +V++G +D+ ++  +   +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 349


>gi|163858862|ref|YP_001633160.1| peptide chain release factor 1 [Bordetella petrii DSM 12804]
 gi|229470349|sp|A9IER8|RF1_BORPD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|163262590|emb|CAP44893.1| peptide chain release factor 1 [Bordetella petrii]
          Length = 360

 Score =  241 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 180/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    RL  ++    +P    ++   + L RER  L+  +    +      D     E+
Sbjct: 9   LEQLSHRLIEVDALLAEPDTAADMERFRKLSRERAELEPVVQAFAQFARTEDDLATAQEM 68

Query: 76  ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  ++ ++     +   +      Q   L     D    +LE+ AG GG ES  ++
Sbjct: 69  LADPDMKAMAEDEIKTGRERLEKLESELQVLLLPRDPNDGRSLFLEIRAGTGGDESALFS 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+R ++ E +     E  G K     I G  AYG LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRYAEQRGWRVELMSESPSELGGYKEVIARIDGDGAYGRLKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D   +I I+ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATEAQGRIHTSACTVAVMPEADAMSDIVINPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A+L + EL++R+  +      K+ +G G    +
Sbjct: 249 LPTGLVVECQDDRSQHRNKDKAMQVLAARLKDRELRERQ--SKEAAERKSLVGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       +++GDL++   A +A  +
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKLQQIMEGDLEELTGALIAEHQ 349


>gi|27379419|ref|NP_770948.1| peptide chain release factor 2 [Bradyrhizobium japonicum USDA 110]
 gi|27352570|dbj|BAC49573.1| peptide chain release factor 2 [Bradyrhizobium japonicum USDA 110]
          Length = 322

 Score =  241 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 199/309 (64%), Positives = 248/309 (80%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L++++S I +++  L D++ ++EL   E D  ++ E    L+ +K EV  ++ E
Sbjct: 1   MQERTSLEDSLSGIGKVEQELEDDIGMIELGEAEGDDGVVAEAEAALKALKKEVARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D+YLEVHAGAGGTESQDWA MLLRMYTRWAE   FK E LE  +GEEAGI
Sbjct: 61  ALLSGEADRFDSYLEVHAGAGGTESQDWAQMLLRMYTRWAETHGFKVEYLEESEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ + G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ V+PV+DDSI+I+I E
Sbjct: 121 KSATIQVSGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQVFPVIDDSIKIDIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ +  S VL+G+LDD
Sbjct: 241 EMELKKREEKAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLNGELDD 300

Query: 346 FMKATLAIK 354
           FM ATLA +
Sbjct: 301 FMAATLAQR 309


>gi|317012016|gb|ADU82624.1| peptide chain release factor 2 [Helicobacter pylori Lithuania75]
          Length = 363

 Score =  241 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 173/352 (49%), Positives = 240/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L ++  L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESTELFELAQNDNDEVTLSLLYEEAPVLEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NESGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++         
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSTKN--EE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362


>gi|169634751|ref|YP_001708487.1| peptide chain release factor 2 [Acinetobacter baumannii SDF]
 gi|169153543|emb|CAP02711.1| peptide chain release factor 2 [Acinetobacter baumannii]
          Length = 310

 Score =  241 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 169/307 (55%), Positives = 223/307 (72%), Gaps = 1/307 (0%)

Query: 47  RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
           +E+  L+N I+ +  +  +L D   +L+LA+E DD S+L++    L   + E+   +F  
Sbjct: 3   KEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELSTAEEELAKLEFRR 62

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S   D N  Y+E+ AG+GGTE+QDWA+MLLRMY RW E+  FK E +E+ DG+ AGIK
Sbjct: 63  MFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAGIK 122

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+ S
Sbjct: 123 SATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDINPS 182

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R DTYRASGAGGQH+N TDSAVR+THIPTG+VV CQ +RSQH N+  AW  LRAKLYE
Sbjct: 183 DVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQLRAKLYE 242

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LE+QKR E A   E  K++IGWG QIRSYVL     +KDLRT +E ++   VLDGDLD F
Sbjct: 243 LEMQKRNEAAQALEDLKSDIGWGSQIRSYVLDD-SRIKDLRTGVENSNTGAVLDGDLDRF 301

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 302 IEASLKQ 308


>gi|226528475|ref|NP_001148129.1| peptide chain release factor 2 [Zea mays]
 gi|195616002|gb|ACG29831.1| peptide chain release factor 2 [Zea mays]
          Length = 467

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 153/351 (43%), Positives = 222/351 (63%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +++ +  +     W   ++R   L    E P LW++ + A  + RE+  L   I  + + 
Sbjct: 107 VAQSVKVIKKRLKWGWILERTKQLAVVLEKPDLWEDPVFAGRVSREQGELMGKIKSVNQF 166

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L +++ +L LA EE+D  +  E+   L  ++   + K+  +LLSG+ DS   ++EV 
Sbjct: 167 EQELIEHIEMLRLAREENDNELEMESMKALADMRRSAKEKELNALLSGDNDSCSCFIEVQ 226

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA M++ MY  WA++R +K   +E   GE AGIK AT+ + G  A+G+ K
Sbjct: 227 AGAGGTESMDWAAMVMNMYRSWAQRRGYKITVVEEMSGEVAGIKRATIKVDGEYAFGYAK 286

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+DS  RRHTSF+++ V P+  D +   +I +SD RI+ +R+ G GGQ
Sbjct: 287 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDTTSRYQIKDSDLRIERFRSGGPGGQ 346

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H NTT+SA+RI HIPTG+    Q ERSQH NKA A  +L+++L +LE+ ++ ++      
Sbjct: 347 HANTTESAIRIVHIPTGISATSQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNAEHTQ 406

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           S  EI WG QIRSYVL PY+MVKDLRTN E + P  VL+GDLDDF+   L+
Sbjct: 407 SLNEISWGNQIRSYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDDFILNYLS 457


>gi|319410939|emb|CBY91334.1| peptide chain release factor I (RF-1) [Neisseria meningitidis WUE
           2594]
          Length = 358

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 122/349 (34%), Positives = 175/349 (50%), Gaps = 8/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +       RL  +      P    ++   + L RE   L   +   +  Q    D  
Sbjct: 4   SILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQSDLA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E+  + +      E  +  +          Q   L     D  + ++EV AG GG E
Sbjct: 64  DAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEVRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR
Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G
Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V+DGDL +   A +A  +
Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQ 349


>gi|307243612|ref|ZP_07525755.1| peptide chain release factor 2 [Peptostreptococcus stomatis DSM
           17678]
 gi|306492981|gb|EFM64991.1| peptide chain release factor 2 [Peptostreptococcus stomatis DSM
           17678]
          Length = 348

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 157/346 (45%), Positives = 226/346 (65%), Gaps = 3/346 (0%)

Query: 12  GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN-- 69
             FD      R   +     +   W++  ++  +++E + ++  ++   ++   + D   
Sbjct: 2   SHFDLKGLESRKVDIEKLMAEQDFWEDTDKSNKILQENKTIEVRLTQYSQLITSIEDINI 61

Query: 70  -LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
            L L E    E+D  I     D ++  +  ++    E L SG+ DSN+A L V++G GG 
Sbjct: 62  LLELSEEDSTEEDQEIENSIIDQVKDARENLDRMTMEMLFSGQYDSNNAILSVNSGTGGL 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ++QDWA MLLRMY RW+E   +K + ++I+   EAGIK+AT+L++G NAYG LK E+GVH
Sbjct: 122 DAQDWAQMLLRMYIRWSESSGYKVKLIDINSDPEAGIKTATILVQGQNAYGHLKSEKGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVRISP+DS+ +RHTSF+SI V P +++ I++EI+++D +IDTYR+SGAGGQHVNTTDS
Sbjct: 182 RLVRISPFDSSGKRHTSFASIDVVPELNEDIKVEINQTDLKIDTYRSSGAGGQHVNTTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITHIPTG+VVQCQ ERSQH NK  A  +L AKL +L+ ++ +E     +   ++I W
Sbjct: 242 AVRITHIPTGIVVQCQNERSQHSNKDIAMKLLMAKLIQLKEEENKERIEDLQGKYSQITW 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           G QIRSYV QPY++VKD RTN E  +   V+DG LD+FM   L  K
Sbjct: 302 GSQIRSYVFQPYKLVKDHRTNEENANVDAVMDGKLDNFMFEYLKQK 347


>gi|219887937|gb|ACL54343.1| unknown [Zea mays]
          Length = 467

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 153/351 (43%), Positives = 222/351 (63%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +++ +  +     W   ++R   L    E P LW++ + A  + RE+  L   I  + + 
Sbjct: 107 VAQSVKVIKKRLKWGWILERTKQLAVVLEKPDLWEDPVFAGRVSREQGELMGKIKSVNQF 166

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L +++ +L LA EE+D  +  E+   L  ++   + K+  +LLSG+ DS   ++EV 
Sbjct: 167 EQELIEHIEMLRLAREENDNELEMESMKALADMRRSAKEKELNALLSGDNDSCSCFIEVQ 226

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA M++ MY  WA++R +K   +E   GE AGIK AT+ + G  A+G+ K
Sbjct: 227 AGAGGTESMDWAAMVMNMYRSWAQRRGYKITVVEEMSGEVAGIKRATIKVDGEYAFGYAK 286

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+DS  RRHTSF+++ V P+  D +   +I +SD RI+ +R+ G GGQ
Sbjct: 287 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDTTSRYQIKDSDLRIERFRSGGPGGQ 346

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H NTT+SA+RI HIPTG+    Q ERSQH NKA A  +L+++L +LE+ ++ ++      
Sbjct: 347 HANTTESAIRIVHIPTGISATSQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNAEHTQ 406

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           S  EI WG QIRSYVL PY+MVKDLRTN E + P  VL+GDLDDF+   L+
Sbjct: 407 SLNEISWGNQIRSYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDDFILNYLS 457


>gi|254805442|ref|YP_003083663.1| peptide chain release factor 1 [Neisseria meningitidis alpha14]
 gi|254668984|emb|CBA07320.1| peptide chain release factor 1 [Neisseria meningitidis alpha14]
          Length = 358

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 121/349 (34%), Positives = 175/349 (50%), Gaps = 8/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +       RL  +      P    ++   + L RE   L   +   +  Q    D  
Sbjct: 4   SILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQSDLA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E+  + +      E  +  +          Q   L     D  + ++E+ AG GG E
Sbjct: 64  DAEEMLSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEIRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR
Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  +IE++  D RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G
Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V+DGDL++   A +A  +
Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQ 349


>gi|254362308|ref|ZP_04978420.1| peptide chain release factor RF1 [Mannheimia haemolytica PHL213]
 gi|153093888|gb|EDN74816.1| peptide chain release factor RF1 [Mannheimia haemolytica PHL213]
          Length = 360

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 181/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     D  +  +  + +   +E   L+  +      +    D      L
Sbjct: 9   LESLSERHEELQALLGDASIISDQDKFRAYSKEYSQLEEVVGTFNRWKKLNNDIEEAQLL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   +  E     +     +E   Q   L     D  +A+LE+ AG GG E+  +A
Sbjct: 69  LDDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+ E ++++ E +  ++ E+ G K   + I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ SD RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A  +L +++ ++E +++       ++ +  +G G +   
Sbjct: 249 IPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQ--ADTRRNLLGSGDRSDK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      +V++G +D+ ++  +   +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 349


>gi|160893851|ref|ZP_02074634.1| hypothetical protein CLOL250_01405 [Clostridium sp. L2-50]
 gi|156864503|gb|EDO57934.1| hypothetical protein CLOL250_01405 [Clostridium sp. L2-50]
          Length = 358

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 126/351 (35%), Positives = 197/351 (56%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ V RL  LN +  DP +  +  + + LM+E+  L   +   KE +D       
Sbjct: 1   MFDKLEDLVDRLDTLNNQLTDPDIVSDQNKFRKLMKEQSELTPIVEKYKEYKDAKQTIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            L +  EE+D  + +   + L   K  VE  +       L     DS +  +E+ AGAGG
Sbjct: 61  SLLMLEEENDEELREMAKEELNEAKATVEKTENELKILLLPKDPNDSKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY ++ ++ K+K E + +++    G K A  +I G  AY  +K E GV
Sbjct: 121 DEAALFAYEIYRMYQKYVDQFKWKVELMSVNENGIGGFKEAVFMITGDGAYSKMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS  ++ V P   + +++EI+E+D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRIPKTESGGRIHTSTVTVAVMP-EAEEVDVEINENDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+  Q E+SQ +NKA+A+ +LR+KLY++ELQK+ +        K++IG
Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQLQNKAKAFALLRSKLYDMELQKQHD--AEAADRKSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+GDL++ + + +A  +
Sbjct: 298 TGDRSEKIRTYNF-PEGRVTDHRIKLTLYKLEQILNGDLNEIIDSLIAADQ 347


>gi|197302438|ref|ZP_03167493.1| hypothetical protein RUMLAC_01166 [Ruminococcus lactaris ATCC
           29176]
 gi|197298336|gb|EDY32881.1| hypothetical protein RUMLAC_01166 [Ruminococcus lactaris ATCC
           29176]
          Length = 339

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 149/329 (45%), Positives = 223/329 (67%), Gaps = 1/329 (0%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             + E+P  W N   ++ +M+E + L +++  I+++     D L+L++++  ED+     
Sbjct: 2   EKRLEEPGFWDNPEVSQQVMKELKGLQDSVKEIEKLYTDYEDMLLLIDMSAGEDEEEETA 61

Query: 87  ETSDNL-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
           E      Q+ +   E  +  +LL G  D ++A + +HAGAGGTE+ DW  ML RMY+RWA
Sbjct: 62  EEVAEELQQFEAVFEQLRISTLLIGPYDRDNAIVTLHAGAGGTEAMDWTGMLYRMYSRWA 121

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           EK+ ++ E L+  +G+ AGIK  T  +KG NAYG+L+ E+GVHRLVRISP+++  +R TS
Sbjct: 122 EKKGYELEVLDYLEGDVAGIKGVTFEVKGENAYGYLRSEKGVHRLVRISPFNAAGKRQTS 181

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S  V P +++ I+IEI+E + RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ 
Sbjct: 182 FASCDVIPDIEEDIDIEINEDELRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQN 241

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQH NK +A  ML++KL  L+ Q++ E  +      ++I +G QIRSYV+QPY MVKD
Sbjct: 242 ERSQHMNKDKAMQMLKSKLLLLKQQEQAEKMSDIRGEVSDINFGNQIRSYVMQPYTMVKD 301

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            RTN E ++   V+DG++D F+ A L++ 
Sbjct: 302 HRTNAEISNVGAVMDGNIDPFINAYLSMD 330


>gi|329119839|ref|ZP_08248513.1| peptide chain release factor RF1 [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327463995|gb|EGF10306.1| peptide chain release factor RF1 [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 362

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 119/349 (34%), Positives = 178/349 (51%), Gaps = 8/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + D   N   RL  +      P    ++   + L +E   L   +   +       D  
Sbjct: 8   SILDKLQNLAHRLEEVTALLGSPEAVADMDNYRRLNQEHAELTPVVETYRAYTRAQSDLA 67

Query: 71  ILLELALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E+  + D      E ++  +          Q   L     D  + ++E+ AG GG E
Sbjct: 68  DAQEMLSDPDMKDFAAEETEAAKAKIDALDLELQKLLLPKDADDDKNIFIEIRAGTGGDE 127

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++ E +  ++ +  G K   + + G  AY  LK E G HR
Sbjct: 128 AALFAGDLLRMYSRYAERNRWQVEIVSANESDLGGYKEVIVRLIGLGAYSKLKFESGGHR 187

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSA
Sbjct: 188 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 247

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G
Sbjct: 248 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 305

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V+DGD+++   A +A  +
Sbjct: 306 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDMEEITAALIAEHQ 353


>gi|226323866|ref|ZP_03799384.1| hypothetical protein COPCOM_01641 [Coprococcus comes ATCC 27758]
 gi|225207415|gb|EEG89769.1| hypothetical protein COPCOM_01641 [Coprococcus comes ATCC 27758]
          Length = 358

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 118/351 (33%), Positives = 191/351 (54%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + R   +  + ++P +  +    + LM+E+  L   +   KE ++   +   
Sbjct: 1   MFDKLEDLLIRYEEIMGELQEPDVVNDQSRFRKLMKEQNDLTPIVEAYKEYKNCKQNIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            L L  EE D  + +   + L   K  VE  +       L     D  +  +E+ AGAGG
Sbjct: 61  SLSLLEEESDEEMKELAKEELSESKKRVEELEQELKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +A+ R++KTE + +++    G K    +I G  AY  +K E GV
Sbjct: 121 DEAALFAAEIYRMYVHYADSRRWKTEMISLNENGIGGFKEVVFMITGQGAYSRMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + +++ I E D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMP-EAEEVDVVIDEKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLYELEL+K+   +   E+ +++IG
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQ--HSAEAEARRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++GDLD+ + + +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSIMNGDLDEVIDSLIAADQ 347


>gi|167038490|ref|YP_001666068.1| peptide chain release factor 1 [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|320116886|ref|YP_004187045.1| peptide chain release factor 1 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|238687641|sp|B0K7G6|RF1_THEP3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166857324|gb|ABY95732.1| peptide chain release factor 1 [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|319929977|gb|ADV80662.1| peptide chain release factor 1 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 356

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 121/346 (34%), Positives = 193/346 (55%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL---IL 72
                 R   L+ K  DP++  NV E +  ++E   +++ +   +E +  L D      L
Sbjct: 5   LQAIEDRYVDLSQKISDPNIISNVAEWRKYVKEHAAIEDIVLKYREYKKVLEDIEATKEL 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L    EE      +E S   ++ +  +E  +   +     D  +  +E+ AGAGG E+  
Sbjct: 65  LSSNDEELKEMAEEELSQLEEKKEKLLEEIKILLIPKDPNDEKNVIMEIRAGAGGEEAAL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A+ L RMY+ +AEK+ +K E +  ++ +  G K   L I G  +Y  LK E GVHR+ R
Sbjct: 125 FAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGSYSRLKYESGVHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P   + +++EI+ +D +ID +R+ G GGQ VNTTDSAVR+
Sbjct: 185 VPTTEAGGRIHTSTATVAVLP-EVEEVDVEINPNDIKIDVFRSGGHGGQSVNTTDSAVRV 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV CQ ERSQ +N+ +A  +LRAKLYE+ LQ+++    I E+ K+++G G   
Sbjct: 244 THIPTGIVVTCQDERSQIQNRERALKILRAKLYEMALQEQQ--REIAETRKSQVGTGERS 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +      +VLDGDLD+ + A +   +
Sbjct: 302 ERIRTYNF-PQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALILNDQ 346


>gi|163759373|ref|ZP_02166459.1| peptide chain release factor 2 [Hoeflea phototrophica DFL-43]
 gi|162283777|gb|EDQ34062.1| peptide chain release factor 2 [Hoeflea phototrophica DFL-43]
          Length = 321

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 226/309 (73%), Positives = 263/309 (85%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ L+++I+ +K  + +L DNL L+E+  EE D  I++E    L+ ++ +V  +Q E
Sbjct: 1   MRERQQLEDSINGLKRTEAQLSDNLELIEMGEEEGDSDIVREAEAALKELRADVTKQQIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD+ND YLEVH+GAGGTESQDWANMLLRMYTRWAE+   K E LEIHDGEEAGI
Sbjct: 61  SLLSGEADANDTYLEVHSGAGGTESQDWANMLLRMYTRWAERSGMKVELLEIHDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLLIKG NAYGWLK E GVHRLVRISPYDS +RRHTSFSSIW YPV+DDSI+++I+E
Sbjct: 121 KSATLLIKGHNAYGWLKTESGVHRLVRISPYDSQARRHTSFSSIWTYPVIDDSIDVDINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           S+CRIDTYRASGAGGQHVNTTDSAVRITHIPTG+VVQCQQERSQHKN+A+AW+MLRA++Y
Sbjct: 181 SECRIDTYRASGAGGQHVNTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDMLRARIY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE AN   +SKTEIGWG QIRSYVLQPYQ+VKDLRT  E TSP DVLDG LD 
Sbjct: 241 EAELKKREEAANDEAASKTEIGWGHQIRSYVLQPYQLVKDLRTGTESTSPQDVLDGKLDP 300

Query: 346 FMKATLAIK 354
           FM+A LA +
Sbjct: 301 FMEAALAQR 309


>gi|317013590|gb|ADU81026.1| peptide chain release factor 2 [Helicobacter pylori Gambia94/24]
          Length = 363

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 242/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L +++ L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESVELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++         
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSTKN--EE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362


>gi|332969013|gb|EGK08053.1| peptide chain release factor RF1 [Kingella kingae ATCC 23330]
          Length = 375

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 119/349 (34%), Positives = 179/349 (51%), Gaps = 8/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + D       RL  +      P    N+   + L +E   L   +   ++ +    D  
Sbjct: 21  SILDKLQTLADRLEEVTALLGSPEATANMDTYRKLNQEHAELTPIVETYQQYRQAESDLT 80

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E+  + D      E  +  +    +     Q   L     D  + ++E+ AG GG E
Sbjct: 81  DAQEMLSDPDMKEFAAEEIEATKIKIEQLDFELQKLLLPKDADDDKNIFIEIRAGTGGDE 140

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++TE +   + +  G K   + + G  AY  LK E G HR
Sbjct: 141 AALFAGDLLRMYSRFAERNRWQTEIVSASESDLGGYKEVIVRLIGLGAYSKLKFESGGHR 200

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  EI+++ +D RIDT+RASGAGGQH+N TDSA
Sbjct: 201 VQRVPATESQGRIHTSACTVAVMPEADELEEIQLNPNDLRIDTFRASGAGGQHINKTDSA 260

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +RITH+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G
Sbjct: 261 IRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDK--QKREAQAKEAAERKSLIGSG 318

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V+DGD+++   A +A  +
Sbjct: 319 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDMEEITSALIAEHQ 366


>gi|332703829|ref|ZP_08423917.1| peptide chain release factor 2 [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332553978|gb|EGJ51022.1| peptide chain release factor 2 [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 368

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 154/350 (44%), Positives = 219/350 (62%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L      L G  D D   +RL  +      P  W        +++E++ +   +  +  
Sbjct: 13  QLLDSYESLWGRLDHDRDNERLRQIEDALSRPGAWDKPDRLTPMLQEKRQISEKLERLTV 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +     +    L+LA E+    +L   S+ L  ++  ++  +   +L+G  D N A +E+
Sbjct: 73  LHKTRQEVEEWLDLAREDQTQEVLAILSEQLDVLQERLKDVELREMLAGPEDQNSAIMEI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H+GAGGTE+QDWA MLLRMY RW+E++ +K   L+  +GEEAG KS T+ ++G  AYG L
Sbjct: 133 HSGAGGTEAQDWAEMLLRMYRRWSERQGYKVSILDFLEGEEAGFKSVTVQVEGLYAYGML 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE G+HRL+RISP+D++ RRHTSF+S+ VYP V   I+I++ E D RID +RASGAGGQ
Sbjct: 193 KGESGIHRLIRISPFDTSGRRHTSFASVAVYPDVGTDIDIDVREEDLRIDVFRASGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITH+PTGVV QCQ E+SQ +NK  A  +L+A+LYELEL+K          
Sbjct: 253 HVNKTESAVRITHLPTGVVAQCQNEKSQLRNKETALKILKARLYELELKKIAAARQAEYE 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           SK  I WG QIR+Y LQPY++VKD RT +E      VL+G++D  ++  L
Sbjct: 313 SKDTIAWGSQIRTYTLQPYRLVKDHRTGMEIGDVEAVLNGEIDPLIRNFL 362


>gi|261399946|ref|ZP_05986071.1| peptide chain release factor 1 [Neisseria lactamica ATCC 23970]
 gi|269210396|gb|EEZ76851.1| peptide chain release factor 1 [Neisseria lactamica ATCC 23970]
          Length = 358

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 121/349 (34%), Positives = 175/349 (50%), Gaps = 8/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +       RL  +      P    ++   + L RE   L   +   +  +    D  
Sbjct: 4   SILEKLQQLGDRLEEVTHLLGQPEATSDIDNYRKLTREHAELTPVVEVFQNYRLAQSDLA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E+  + +      E  +  +          Q   L     D  + ++EV AG GG E
Sbjct: 64  DAEEMLSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEVRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR
Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G
Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V+DGDL +   A +A  +
Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQ 349


>gi|217031931|ref|ZP_03437433.1| hypothetical protein HPB128_3g50 [Helicobacter pylori B128]
 gi|298736886|ref|YP_003729416.1| peptide chain release factor RF-2 [Helicobacter pylori B8]
 gi|216946400|gb|EEC25005.1| hypothetical protein HPB128_3g50 [Helicobacter pylori B128]
 gi|298356080|emb|CBI66952.1| peptide chain release factor RF-2 [Helicobacter pylori B8]
          Length = 363

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 174/352 (49%), Positives = 242/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELGRIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L +++ L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KNSLDESVELFELAQNDNDEVTLSLLYEEAPILEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NESGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++  A      
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQSSAKN--EE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+N   ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNTAYSNVEAILDGDIDAILEGVLIAK 362


>gi|153854560|ref|ZP_01995830.1| hypothetical protein DORLON_01825 [Dorea longicatena DSM 13814]
 gi|149752869|gb|EDM62800.1| hypothetical protein DORLON_01825 [Dorea longicatena DSM 13814]
          Length = 312

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 154/307 (50%), Positives = 215/307 (70%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+E ++L   +  I  +     D  +L+E+  E++D ++++E  + +   +   E  + +
Sbjct: 1   MKELKNLKELVETIHGLYTSYEDINLLIEMGYEDEDPAMVKELEEEIHTFEKVFEKLKIQ 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGE D+ +A + +HAGAGGTES DWA ML RMY RWAE++ F  + L+  DG+ AGI
Sbjct: 61  TLLSGEYDACNAIMTIHAGAGGTESCDWAGMLYRMYCRWAERKGFSLQVLDFLDGDIAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T  +KG NAYG+LK E+GVHRLVRISP++S  +R TSF+S  V P ++D I+IEI E
Sbjct: 121 KAVTFEVKGENAYGYLKSEKGVHRLVRISPFNSAGKRQTSFASCDVLPDLEDDIDIEIDE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D +IDTYRASGAGGQHVN T SA+RITH+PTG+VVQCQ ERSQH NK +A  ML+AKL 
Sbjct: 181 DDLKIDTYRASGAGGQHVNKTSSAIRITHLPTGIVVQCQNERSQHHNKEKAMQMLKAKLQ 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            ++ Q++ E  +       +IG+G QIRSYV+QPY +VKD RTN E ++ + V+DGD+D 
Sbjct: 241 LMKEQEQAEKVSDIRGEVKDIGFGNQIRSYVMQPYTLVKDHRTNEENSNVNAVMDGDIDS 300

Query: 346 FMKATLA 352
           F+ A L 
Sbjct: 301 FINAYLK 307


>gi|240950074|ref|ZP_04754376.1| peptide chain release factor 1 [Actinobacillus minor NM305]
 gi|240295449|gb|EER46204.1| peptide chain release factor 1 [Actinobacillus minor NM305]
          Length = 360

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 185/344 (53%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     D  +  +  + +   +E   L+  +S     +    D      L
Sbjct: 9   LESLSERHEELQALLGDATIINDQDKFRAYSKEYAQLEEVVSTFNRWKKLHSDIEEAQIL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   +  E  +  +    ++E   Q   L     D  + +LE+ AG GG E+  +A
Sbjct: 69  LDDPDMKDMAAEEIEENKAEIEQLEQNLQILLLPKDPNDEYNCFLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE ++++ E L  ++ E+ G K   + I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLYRMYSRYAEGKRWRIEELSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A  +L +++ ++E +K+ +     ++ +  +G G +   
Sbjct: 249 IPTGIVVECQDERSQHKNKAKALAVLASRIVQVEKEKQAQEQ--ADTRRNLLGSGDRSDK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      +V++G +D+ ++  +   +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 349


>gi|121635327|ref|YP_975572.1| peptide chain release factor 1 [Neisseria meningitidis FAM18]
 gi|166223577|sp|A1KV95|RF1_NEIMF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|120867033|emb|CAM10796.1| peptide chain release factor I [Neisseria meningitidis FAM18]
 gi|325132818|gb|EGC55498.1| peptide chain release factor 1 [Neisseria meningitidis M6190]
 gi|325138721|gb|EGC61273.1| peptide chain release factor 1 [Neisseria meningitidis ES14902]
 gi|325198784|gb|ADY94240.1| peptide chain release factor 1 [Neisseria meningitidis G2136]
          Length = 358

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 120/349 (34%), Positives = 175/349 (50%), Gaps = 8/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +       RL  +      P    ++   + L RE   L   +   +  +    D  
Sbjct: 4   SILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQSDLA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E+  + +      E  +  +          Q   L     D  + ++E+ AG GG E
Sbjct: 64  DAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR
Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G
Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V+DGDL +   A +A  +
Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQ 349


>gi|167038767|ref|YP_001661752.1| peptide chain release factor 1 [Thermoanaerobacter sp. X514]
 gi|300913648|ref|ZP_07130965.1| peptide chain release factor 1 [Thermoanaerobacter sp. X561]
 gi|307723337|ref|YP_003903088.1| peptide chain release factor 1 [Thermoanaerobacter sp. X513]
 gi|238687578|sp|B0K1F7|RF1_THEPX RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166853007|gb|ABY91416.1| peptide chain release factor 1 [Thermoanaerobacter sp. X514]
 gi|300890333|gb|EFK85478.1| peptide chain release factor 1 [Thermoanaerobacter sp. X561]
 gi|307580398|gb|ADN53797.1| peptide chain release factor 1 [Thermoanaerobacter sp. X513]
          Length = 356

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 120/346 (34%), Positives = 193/346 (55%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL---IL 72
                 R   L+ K  DP++  NV E +  ++E   +++ +   +E +  L D      L
Sbjct: 5   LQAIEDRYVELSQKISDPNIISNVNEWRKYVKEHAAIEDIVLKYREYKKVLEDIEATKEL 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L    EE      +E S   ++ +  +E  +   +     D  +  +E+ AGAGG E+  
Sbjct: 65  LSSNDEELKEMAEEELSQLEEKKEKLLEEIKILLIPKDPNDEKNVIMEIRAGAGGEEAAL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A+ L RMY+ +AEK+ +K E +  ++ +  G K   L I G  +Y  LK E GVHR+ R
Sbjct: 125 FAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGSYSRLKYESGVHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P   + +++EI+ +D ++D +R+ G GGQ VNTTDSAVR+
Sbjct: 185 VPTTEAGGRIHTSTATVAVLP-EVEEVDVEINPNDIKVDVFRSGGHGGQSVNTTDSAVRV 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV CQ ERSQ +N+ +A  +LRAKLYE+ LQ+++    I E+ K+++G G   
Sbjct: 244 THIPTGIVVTCQDERSQIQNRERALKILRAKLYEMALQEQQ--REIAETRKSQVGTGERS 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +      +VLDGDLD+ + A +   +
Sbjct: 302 ERIRTYNY-PQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALILNDQ 346


>gi|301335943|ref|ZP_07224187.1| peptide chain release factor 2 [Chlamydia trachomatis L2tet1]
          Length = 334

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 155/326 (47%), Positives = 205/326 (62%), Gaps = 1/326 (0%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             +      W +V  A  +      L   +S   E+++++      LE      D  + +
Sbjct: 2   EQQAVQDGFWDDVARAGKISERIARLKQQLSEFNELKNKVSTIQFFLEDEESSKDLEMQK 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E        + ++   +   LLSGE D N  +L ++AGAGGTES DW  M+LRMY RWA 
Sbjct: 62  ELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMVLRMYMRWAS 121

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
              ++ E ++  DGE AGIK  TL + G  AYG+ K E GVHRLVRISP+DSN++RHTSF
Sbjct: 122 SHSWRVEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSF 181

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S+ V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ E
Sbjct: 182 ASVEVFPEIDDKIEVEIHPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNE 241

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQ +N+    NMLRA++Y+  LQ+R E  NI   +K EI WG QIR+YV QPY +VKD+
Sbjct: 242 RSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDV 301

Query: 327 RTNIEKTSPSDVLDGD-LDDFMKATL 351
           RT  E  +   ++DG+ LD F+KA L
Sbjct: 302 RTGYEVGNIQAMMDGELLDAFIKAYL 327


>gi|309378429|emb|CBX22924.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 358

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 120/349 (34%), Positives = 174/349 (49%), Gaps = 8/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +       RL  +      P    ++   + L RE   L   +   +  +    D  
Sbjct: 4   SILEKLQQLGDRLEEVTHLLGQPEATSDIDNYRKLTREHAELSPVVEVFQHYRRAQSDLA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E+  + +      E  +  +          Q   L     D  + ++EV AG GG E
Sbjct: 64  DAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEVRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR
Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QK E  A      K+ IG G
Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKHEAQAKEAAERKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V+DGDL +   A +A  +
Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQ 349


>gi|325128768|gb|EGC51631.1| peptide chain release factor 1 [Neisseria meningitidis N1568]
          Length = 358

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 120/349 (34%), Positives = 176/349 (50%), Gaps = 8/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +       RL  +      P    ++   + L RE   L   +   +  +    D  
Sbjct: 4   SILEKLQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAELSPVVEVFQHYRRAQSDLA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E+  + +      E  +  +          Q   L     D  + ++E+ AG GG E
Sbjct: 64  DAEEMLSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEIRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR
Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G
Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V+DGDL++   A +A  +
Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQ 349


>gi|284929451|ref|YP_003421973.1| peptide chain release factor 2 [cyanobacterium UCYN-A]
 gi|284809895|gb|ADB95592.1| bacterial peptide chain release factor 2 (bRF-2) [cyanobacterium
           UCYN-A]
          Length = 344

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 144/335 (42%), Positives = 214/335 (63%), Gaps = 1/335 (0%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
                +  L   T  P+ W N   A+ + +E  +  + +    +  ++L D  I+++L +
Sbjct: 3   ALQASIKDLENTTIQPNFWDNPETAQKISQELSNFKSQLDQYHQWYNKLEDTKIIMDLLI 62

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
            ++D S+L+E  +N+ ++K  ++    + LLSG  D   A L ++ G GGT++QDW+ ML
Sbjct: 63  LDNDKSLLEEAQNNITQLKKNLDNWDLQQLLSGTYDIKGAILNINTGVGGTDAQDWSEML 122

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
           LRMY RW E + +K   +EI +G+EAGIKSATL  +G  A+G+LKGE+G HRLVRISP++
Sbjct: 123 LRMYRRWGESQGYKVNLVEISEGDEAGIKSATLEFEGCYAFGYLKGEKGTHRLVRISPFN 182

Query: 198 SNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +N +R TSF+ I V P    + I++EI + D  I T R+ G GGQ+VN  ++AVRI H+P
Sbjct: 183 ANGKRQTSFTGIEVMPKLEGNDIKVEIPDKDLEITTTRSGGKGGQNVNKVETAVRIVHLP 242

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316
           TG+ V+C QERSQ +NK +A  +L+AKL  +  ++R +          E  WG QIRSYV
Sbjct: 243 TGISVRCTQERSQLQNKEKALILLKAKLLIIAQEQRAKKIAEIRGDIVEAAWGNQIRSYV 302

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             PYQMVKDLRTN+E T+ +DV+DGDL  F++A L
Sbjct: 303 FHPYQMVKDLRTNVETTNINDVMDGDLGLFIEAYL 337


>gi|291550093|emb|CBL26355.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus
           torques L2-14]
          Length = 356

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 116/351 (33%), Positives = 190/351 (54%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ V R   +  + ++P +  +    + LM+E+  L   +   +E +    +   
Sbjct: 1   MFDRLEDLVIRYQEVMGELQEPDVANDPERFRKLMKEQSDLAPIVEAYQEYKKCKQNVEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   + L   K  +E  +       L     D  +  +E+ AGAGG
Sbjct: 61  SLMILEEESDEEMRELAKEELNESKARIEELEQELKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +A+ R++KTE + +++    G K    +I G  AY  +K E GV
Sbjct: 121 DEAALFAAEIYRMYVHYADSRRWKTEMISLNENGIGGFKECVFMITGQGAYSRMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + +++ I E D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMP-EAEEVDVVIDEKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLY+LEL+K++  A+     +++IG
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLELEKKQ--ASEAAERRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+GDLD+ + + +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSILNGDLDEVIDSLIAADQ 347


>gi|295109135|emb|CBL23088.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus
           obeum A2-162]
          Length = 358

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 119/351 (33%), Positives = 191/351 (54%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + R   +  +  +P +  N    + LM+E+  L   +   KE ++       
Sbjct: 1   MFDKLEDLLVRFEEVLNELGEPGVTDNQDRFQKLMKEQSELQPIVDTYKEYKENKETIQD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   + L   K       +  +   L     DS +  +E+ AGAGG
Sbjct: 61  SLSMLEEEKDEEMREMLKEELSDAKKRVEELEKELKILLLPKDPNDSKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY ++AE R++KTE + +++    G K  T +I+G  AY  LK E GV
Sbjct: 121 DEAALFAAEIYRMYVKYAESRRWKTEMMSLNENGIGGFKEVTFMIQGQGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ + P   + I+  +  +DC+ D +RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTCTVAIMP-EAEEIDFHLDMNDCKFDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+ CQ E+SQ KNK +A  +LR++LYE+EL K+ +     E+ +++IG
Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYEMELAKQHD--AEAEARRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L GDLD+ + + +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHRLDAILGGDLDEILDSLIAADQ 347


>gi|255535765|ref|YP_003096136.1| Peptide chain release factor 2 [Flavobacteriaceae bacterium
           3519-10]
 gi|255341961|gb|ACU08074.1| Peptide chain release factor 2 [Flavobacteriaceae bacterium
           3519-10]
          Length = 370

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 149/351 (42%), Positives = 229/351 (65%), Gaps = 2/351 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           + ++  L      +     +S    KT  P  W    +A++ M++ +     ++  +EI 
Sbjct: 11  NSRIADLYKYLQIEKKKIEISNDEEKTLSPEFWDKPKDAEIFMKQLRSKKKWVTDYEEIF 70

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            RL D  +L+E A   +D    +E  +    +  ++E  +F+++LS E D   A L++ A
Sbjct: 71  SRLEDIQVLMEFAK--EDPDSEKELDEAFPVLLEKIEDLEFKNMLSNEGDELSAVLQITA 128

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTES DWA+ML+RMYT WAEK+ +K   L   +G+ AGIK+ TL I G  A+G+L+G
Sbjct: 129 GAGGTESCDWASMLMRMYTMWAEKQGYKLRELNYQEGDVAGIKTVTLEIDGEFAFGYLRG 188

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVRISP+DSN++RHTSF S++VYP+VDD+IEI I+ +D   +T R+SGAGGQ+V
Sbjct: 189 ENGVHRLVRISPFDSNAKRHTSFVSVYVYPLVDDTIEININPADISFETMRSSGAGGQNV 248

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N  ++AVR+ H PTG++++  + RSQ +NK +A  +LR++LYE+EL++R +  N  E+ K
Sbjct: 249 NKVETAVRLRHAPTGIIIENSESRSQLQNKEKAMQLLRSRLYEMELEERMKARNEIEAGK 308

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +I WG QIR+YV+ PY++VKD+R+  E +    V++G+L  F+KA L   
Sbjct: 309 MKIEWGSQIRNYVMHPYKLVKDVRSGHETSDVDAVMNGELTPFLKAFLMSD 359


>gi|251792741|ref|YP_003007467.1| peptide chain release factor 1 [Aggregatibacter aphrophilus NJ8700]
 gi|247534134|gb|ACS97380.1| peptide chain release factor 1 [Aggregatibacter aphrophilus NJ8700]
          Length = 360

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 179/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     D  +  +  + +   +E   L++ +           +      L
Sbjct: 9   LESLKERYEELEALLGDASVISDQDKFRAYSKEYSQLEDVVKCFNRWNQLNSNLEEAKIL 68

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q   +  +       +  Q   L     D  + YLE+ AG GG E+  +A
Sbjct: 69  LDDPEMKEMAQMEIEESEAELTEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE ++++ E L  ++ E+ G K    L+ G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAELKRWRVEVLSENESEQGGFKEIIALVSGDGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ SD RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPSDLRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A ++L ++L + E  K  +     ++ +  +G G +   
Sbjct: 249 IPTGMVVECQDERSQHKNKAKALSVLASRLVQQEQDKLAQEQ--ADTRRNLLGSGDRSDK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      +V++G +D+ ++  +   +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQPIITEYQ 349


>gi|297571771|ref|YP_003697545.1| peptide chain release factor 2 [Arcanobacterium haemolyticum DSM
           20595]
 gi|296932118|gb|ADH92926.1| peptide chain release factor 2 [Arcanobacterium haemolyticum DSM
           20595]
          Length = 376

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 140/359 (38%), Positives = 217/359 (60%), Gaps = 7/359 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L R  + +  + D      +++ L  ++  P LW +  +A+ +  +  H  + +  + +
Sbjct: 11  ELRRSYSQIEAVTDVTALQTKIADLTEQSGAPDLWDDPEKAQGVTSQLSHAQSELDRVVK 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETS------DNLQRIKLEVEYKQFESLLSGEADSN 115
           + +R+ D   L ++A+EE +                L+R++ ++   + ++LLSGE D  
Sbjct: 71  MGERVADLETLYDMAVEESESDAAMGAELFAEVDGELERVRTDLSELEIKTLLSGEYDER 130

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           DA + + +GAGG ++ DWA ML RMY RWAE+R +KT+ ++    EEAGIKS T  +  P
Sbjct: 131 DAVVTIRSGAGGVDAADWAQMLQRMYLRWAERRGYKTKVMDTSYAEEAGIKSTTFEVSAP 190

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYG L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  I+I ES+ +ID +R+
Sbjct: 191 YAYGTLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIETTDHIDIPESELKIDVFRS 250

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQ VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L +   ++   I
Sbjct: 251 SGPGGQSVNTTDSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLQSRLLQKRHEEEAAI 310

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                    +  WG Q+RSYVL PYQMVKDLRT  E  +   V DGD+D F+ A +  +
Sbjct: 311 KKELAGD-VKGAWGDQMRSYVLHPYQMVKDLRTGFEVGNTESVFDGDIDGFIDAGIRWR 368


>gi|210134369|ref|YP_002300808.1| peptide chain release factor 2 [Helicobacter pylori P12]
 gi|238054483|sp|B6JPR7|RF2_HELP2 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|210132337|gb|ACJ07328.1| peptide chain release factor RF-2 [Helicobacter pylori P12]
          Length = 363

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 175/352 (49%), Positives = 242/352 (68%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +D L +++ L ELA  ++D   L    +    ++  V+  + E +LSGE D+++A + + 
Sbjct: 73  KDSLDESVELFELAQNDNDEVTLSLLYEEAPTLEHSVQKVEIEIMLSGENDASNAIITIQ 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQH
Sbjct: 193 NENGVHRLVRISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH PTG+VVQCQ +RSQHKNKA A  ML++KLYELEL+K++         
Sbjct: 253 VNKTESAVRITHFPTGIVVQCQNDRSQHKNKASALKMLKSKLYELELEKQQNSTKN--EE 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 311 KSEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 362


>gi|283798430|ref|ZP_06347583.1| peptide chain release factor 1 [Clostridium sp. M62/1]
 gi|291073835|gb|EFE11199.1| peptide chain release factor 1 [Clostridium sp. M62/1]
 gi|295090782|emb|CBK76889.1| bacterial peptide chain release factor 1 (bRF-1) [Clostridium cf.
           saccharolyticum K10]
 gi|295115024|emb|CBL35871.1| bacterial peptide chain release factor 1 (bRF-1)
           [butyrate-producing bacterium SM4/1]
          Length = 358

 Score =  240 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 119/351 (33%), Positives = 195/351 (55%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D+ + R   L  +  +P++ ++  + + LM+E+  L   +   K  +    D   
Sbjct: 1   MFDRLDDLLIRYEELMEELNNPYVVEDQKKFRKLMKEQADLAPIVEAYKNYKQAHQDVED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            + L  EE D  + +   + L   K  +E  +       L     D  +  +E+ AGAGG
Sbjct: 61  SVALLEEESDEEMRELAKEELADAKKRIEELEQELKILLLPKDPNDEKNVMVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A+ L RMY R+AE++++KTE + +++    G K    ++ G  AY  LK E GV
Sbjct: 121 DEAALFASELYRMYVRYAERKRWKTEIVSLNENGIGGFKEVVFMVTGQGAYSKLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P  ++     I  +DCRID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVMPEAEEFDIE-IDMNDCRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+V+  Q E+SQ +NK +A+ +LR+KLY+LEL++R+      E+ +++IG
Sbjct: 240 SAVRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLELERRQSE--ESEARRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V + R  +       V+DG+LD+ + + +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTEHRIKLTLYKIDSVMDGELDELIDSLIAADQ 347


>gi|254674224|emb|CBA10008.1| peptide chain release factor 1 [Neisseria meningitidis alpha275]
          Length = 358

 Score =  240 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 121/349 (34%), Positives = 174/349 (49%), Gaps = 8/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +       RL  +      P    ++   + L RE   L   +   +  Q    D  
Sbjct: 4   SILEKLQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAELTPVVEVFQNYQLAQSDLA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E+  + +      E  +  +          Q   L     D  + ++E+ AG GG E
Sbjct: 64  DAEEMLSDPEMKDFAAEEIEAAKAKIGALDTELQKLLLPKDTDDDKNIFIEIRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR
Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  +IE++  D RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G
Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V+DGDL +   A +A  +
Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQ 349


>gi|88192320|pdb|2B9M|Y Chain Y, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2
           From A Crystal Structure Of The Whole Ribosomal Complex.
           This File Contains The 30s Ribosomal Subunit, Trnas,
           Mrna And Release Factor Rf2 From A Crystal Structure Of
           The Whole Ribosomal Complex". The Entire Crystal
           Structure Contains One 70s Ribosome, Trnas, Mrna And
           Release Factor Rf2 And Is Described In Remark 400
          Length = 365

 Score =  240 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 209/353 (59%), Gaps = 5/353 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+++L  L G  D      RL  L  + EDP LW +   A+ + +E   L   +   + 
Sbjct: 5   RLAQRLEGLRGYLDIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRS 64

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L   L L+E    E+  +        L+    +++    ++LL+      +A L +
Sbjct: 65  LESDLQGLLELMEELPAEEREA----LKPELEEAAKKLDELYHQTLLNFPHAEKNAILTI 120

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
             GAGGTE+ DWA MLLRMYTR+AE++ F+ E +++  G EAGI  A +L+KG NAYG L
Sbjct: 121 QPGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLL 180

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E GVHRLVR SP+D++ RRHTSF+ + V P VD+ +E+ +   + RID  RASG GGQ
Sbjct: 181 SPEAGVHRLVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQ 240

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+ H+PTG+ V CQ  RSQ KNK  A  +L+A+LYELE +KREE       
Sbjct: 241 GVNTTDSAVRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRG 300

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               I WG QIRSYVL     VKD RT + +  P +VLDGDL D + A L  K
Sbjct: 301 EVRPIEWGSQIRSYVLDK-NYVKDHRTGLMRHDPENVLDGDLMDLIWAGLEWK 352


>gi|197301354|ref|ZP_03166435.1| hypothetical protein RUMLAC_00081 [Ruminococcus lactaris ATCC
           29176]
 gi|197299511|gb|EDY34030.1| hypothetical protein RUMLAC_00081 [Ruminococcus lactaris ATCC
           29176]
          Length = 356

 Score =  240 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 116/351 (33%), Positives = 192/351 (54%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D+ + R   +  + ++P +  +    + LM+E+  L   +   KE ++   +   
Sbjct: 1   MFDRLDDLLIRYEEVMGELQEPDVANDPERFRRLMKEQSDLAPIVEAYKEYKNCKQNIEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            L+L  EE D  + +   + L   +  +E  +       L     D  +  +E+ AGAGG
Sbjct: 61  SLQLLEEESDEEMRELAKEELSGSRARIEELEQELKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +A+ R++KTE + +++    G K    ++ G  AY  +K E GV
Sbjct: 121 DEAALFAAEIYRMYVHYADSRRWKTEMISLNENGIGGFKECVFMVTGQGAYSRMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + +++ I E D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMP-EAEEVDVVIDEKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLY+LEL+K++  A+     +++IG
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDLELEKQQ--ASEAAERRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+GDLD+ + + +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSILNGDLDEIIDSLIAADQ 347


>gi|299472049|emb|CBN80132.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 466

 Score =  240 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 149/352 (42%), Positives = 215/352 (61%), Gaps = 6/352 (1%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            L    D      RL+ L+    DP L+ +  +A  +++ER  +++ +  +K +   L  
Sbjct: 106 LLSSRLDIPALEARLAELDALVSDPKLYDDSTKAGKIVKERAKVESKLENVKSLNSELQS 165

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYK--QFESLLSGEADSNDAYLEVHAGAG 126
              + E+A  E++  +L E  + +  ++ + E    +    L GE  +++ YLE+ AGAG
Sbjct: 166 WREMYEMASLEEEGDLLTECIEKVGALRKQAERARAETLLSLGGELSASNCYLELQAGAG 225

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTES DW +ML +MYTRWAE + F  + L    G+EAG++S  + ++G +AYGWL+ E G
Sbjct: 226 GTESHDWTSMLYKMYTRWAETKAFTLQPLNSSPGDEAGLRSVMVFVEGESAYGWLRSEAG 285

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPV----VDDSIEIEISESDCRIDTYRASGAGGQH 242
           VHRLVR SPYD N RRHTSFS + V+P       D+ ++EI   D ++DT RA GAGGQH
Sbjct: 286 VHRLVRNSPYDPNGRRHTSFSQVRVFPEAGGESGDAAKVEIPAKDLKVDTMRAQGAGGQH 345

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+V   Q +RSQHKN+  A   LRAK+++ + ++R    N   + 
Sbjct: 346 VNTTDSAVRLTHLPTGLVALSQSDRSQHKNRENAMRALRAKIFQRKEEERHAKRNEYAAG 405

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  +G QIRSYVL PYQMVKD RT  ++   S VLDG LD F+ A L  +
Sbjct: 406 LGDNAFGNQIRSYVLSPYQMVKDHRTGKQEGDVSGVLDGGLDGFIDAALIAE 457


>gi|225075789|ref|ZP_03718988.1| hypothetical protein NEIFLAOT_00805 [Neisseria flavescens
           NRL30031/H210]
 gi|224952871|gb|EEG34080.1| hypothetical protein NEIFLAOT_00805 [Neisseria flavescens
           NRL30031/H210]
          Length = 358

 Score =  240 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 121/349 (34%), Positives = 176/349 (50%), Gaps = 8/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +       RL  +      P    ++   + L RE   L   +   +  Q    D  
Sbjct: 4   SILEKLQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQSDLA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E+  + +      E  +  +          Q   L     D  + ++EV AG GG E
Sbjct: 64  DAEEMLSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEVRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR
Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G
Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   + D R N+       V+DGDL++   A +A  +
Sbjct: 302 DRSERIRTYNY-PQGRITDHRINLTLHKLDFVMDGDLEEITNALIAEHQ 349


>gi|327403921|ref|YP_004344759.1| peptide chain release factor 2 (bRF-2) [Fluviicola taffensis DSM
           16823]
 gi|327319429|gb|AEA43921.1| bacterial peptide chain release factor 2 (bRF-2) [Fluviicola
           taffensis DSM 16823]
          Length = 360

 Score =  240 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 140/352 (39%), Positives = 223/352 (63%), Gaps = 3/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +++++++ +           +L     KT+DP+ W +  +A+  M++ + L   I     
Sbjct: 9   EINQRIDAIASYLKIPEKEMQLRESELKTQDPNFWDDPKKAEAEMKDIRGLKFWIESYTR 68

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ +  D  +L+E     +  +   E  +  Q +   +E  + +++LSGE D+  A +++
Sbjct: 69  LKSQSDDLEVLIEFVK--EGAAEESECDEAYQSMLTTIEEVELKNMLSGEEDALSAVIQI 126

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGTE+ DWA ML+RMY  WAEK  +K + L   +G+ AGIK+ TL I+G  A+G+L
Sbjct: 127 TAGAGGTEACDWAGMLMRMYIMWAEKSGYKVKELNFQEGDVAGIKTVTLEIEGEFAFGYL 186

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE G+HRLVR+SPY+S  +R TSF+S++VYP VDD+IEI ++ +D   +T+R+ GAGGQ
Sbjct: 187 KGENGIHRLVRVSPYNSQGKRMTSFASVYVYPSVDDTIEIYVNPADITFETFRSGGAGGQ 246

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++AVR+ H  +G++++  + RSQ  NK +A  +LR++LYE+EL+KR E  +  E+
Sbjct: 247 NVNKVETAVRLRHAASGIIIENSESRSQLANKEKAMQLLRSQLYEIELRKRAESRDQIEA 306

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            K +I WG QIRSYVL   + VKD RT+     P  VLDGDL  F+K+ L +
Sbjct: 307 GKKKIEWGSQIRSYVLDD-RRVKDHRTDYSVNDPDKVLDGDLLPFLKSFLMM 357


>gi|85057585|ref|YP_456501.1| peptide chain release factor 2 [Aster yellows witches'-broom
           phytoplasma AYWB]
 gi|84789690|gb|ABC65422.1| bacterial peptide chain release factor 2 [Aster yellows
           witches'-broom phytoplasma AYWB]
          Length = 370

 Score =  240 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 160/350 (45%), Positives = 219/350 (62%), Gaps = 3/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L + L  L    +     Q +  LN   +    WQN  +A  + ++   L +  + ++ +
Sbjct: 13  LYQNLQDLKQALNLKKTNQTIEKLNCAMQKEDFWQNPKKAVTISQQFNDLQDKKNTLEIL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    D      L    ++ S L    + L+ +   V   + +  L+   D N+A L  H
Sbjct: 73  EQNYLDLETFFNLNESPNEASAL--LEEELKNLTKSVFDFKIKIFLNQPYDINNAILLFH 130

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDW  ML RMY ++A+K+ FKTE L+   GE AG+KSATLLIKG  AYG+LK
Sbjct: 131 PGAGGTESQDWCEMLFRMYQKYAQKKNFKTEILDYQLGEGAGVKSATLLIKGTYAYGYLK 190

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DSNS+RHTSF +  V P +++ I+I +   D +ID +R+SGAGGQH
Sbjct: 191 AEKGVHRLVRISPFDSNSKRHTSFVACDVLPEINEEIKINLKTEDLKIDVFRSSGAGGQH 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE-LQKREEIANIGES 301
           VNTTDSAVRITH+PTG+VV CQ ERSQ KNK +A  ML+ KL++L   Q++E+ A   +S
Sbjct: 251 VNTTDSAVRITHLPTGLVVGCQNERSQIKNKEKALQMLKTKLFQLASKQQKEQNAKKFQS 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            + E GWG QIRSYV  PY+MVKD RTN E      V+DG++D+F+   L
Sbjct: 311 DQKENGWGSQIRSYVFHPYKMVKDHRTNQEIFQLEQVMDGNIDEFINGYL 360


>gi|161870534|ref|YP_001599706.1| peptide chain release factor 1 [Neisseria meningitidis 053442]
 gi|189039981|sp|A9M1Q8|RF1_NEIM0 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|161596087|gb|ABX73747.1| peptide chain release factor I [Neisseria meningitidis 053442]
          Length = 358

 Score =  240 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 121/349 (34%), Positives = 174/349 (49%), Gaps = 8/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +       RL  +      P    ++   + L RE   L   +   +  +    D  
Sbjct: 4   SILEKLQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAELTPVVEVFQNYRLAQSDLA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E+  + +      E  +  +          Q   L     D  + ++EV AG GG E
Sbjct: 64  DAEEMLSDPEMKDFAAEEIEAAKAKIGALDTELQKLLLPKDADDDKNIFIEVRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR
Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  +IE++  D RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G
Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V+DGDL +   A +A  +
Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQ 349


>gi|153007050|ref|YP_001381375.1| peptide chain release factor 1 [Anaeromyxobacter sp. Fw109-5]
 gi|166223527|sp|A7HI45|RF1_ANADF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|152030623|gb|ABS28391.1| peptide chain release factor 1 [Anaeromyxobacter sp. Fw109-5]
          Length = 372

 Score =  240 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 119/341 (34%), Positives = 184/341 (53%), Gaps = 10/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QR   L     DP +  N    + + +ER  L+  +  ++  +  + D      L
Sbjct: 10  LEAIEQRFEELTALLSDPSVASNGDRFRKVSKERASLEPTVEALRAYRKLVTDIGDNEAL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D         +  Q        ++      +    AD  D  LE+ AGAGG E+  
Sbjct: 70  LEEKDPDLREMAKEELAQLRPQVDPAEEQLKLYLVPKDPADEKDVILEIRAGAGGDEAGL 129

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LLRMY R+AE+R ++TE  +   G   G+K  T+ I G + Y WLK E GVHR+ R
Sbjct: 130 FAAELLRMYLRYAERRGWRTEVADTSAGNLGGVKDVTVNIAGDSVYSWLKFESGVHRVQR 189

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P   + I+I++S +D  +D +R++G+GGQ VNTTDSAVR+
Sbjct: 190 VPATEAQGRIHTSTVTVAVMP-EAEDIDIQVSPADIEMDVFRSTGSGGQSVNTTDSAVRL 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH PTG++V+CQQE+SQ KN+  A  MLRAKLYE+EL+++    +     K+++G G   
Sbjct: 249 THKPTGIIVKCQQEKSQLKNRNMAMRMLRAKLYEIELERQRSARDAA--RKSQVGTGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            +IR+Y   P   + D R N  + +   V+DGD+ D + A 
Sbjct: 307 EKIRTYNF-PQDRLTDHRINYTRHNLPAVMDGDVQDVIDAC 346


>gi|257464821|ref|ZP_05629192.1| peptide chain release factor 1 [Actinobacillus minor 202]
 gi|257450481|gb|EEV24524.1| peptide chain release factor 1 [Actinobacillus minor 202]
          Length = 360

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 185/344 (53%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     D  +  +  + +   +E   L+  +S     +    D      L
Sbjct: 9   LESLSERHEELQALLGDATIINDQDKFRAYSKEYAQLEEVVSTFNRWKKLHSDIEEAQIL 68

Query: 76  ALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   +  +E   N   I+   +  Q   L     D  + +LE+ AG GG E+  +A
Sbjct: 69  LDDPDMKDMAAEEIEANKAEIEQLEQNLQILLLPKDPNDEYNCFLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE ++++ E L  ++ E+ G K   + I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLYRMYSRYAEGKRWRIEELSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A  +L +++ ++E +K+ +     ++ +  +G G +   
Sbjct: 249 IPTGIVVECQDERSQHKNKAKALAVLASRIVQVEKEKQAQEQ--ADTRRNLLGSGDRSDK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      +V++G +D+ ++  +   +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 349


>gi|192360464|ref|YP_001981172.1| peptide chain release factor 1 [Cellvibrio japonicus Ueda107]
 gi|238692456|sp|B3PJP4|RF1_CELJU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|190686629|gb|ACE84307.1| peptide chain release factor 1 [Cellvibrio japonicus Ueda107]
          Length = 360

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 120/342 (35%), Positives = 176/342 (51%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   ++    +  +  N    + L +E   L+  +   K     L D      L
Sbjct: 9   LERLKERYEEVSALLSEADVINNQARFRDLSKEYAELEPVVVAYKGYLQLLADIEEAKHL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
             E D   + +   + L+  +  +E  + E           D  + YLEV AG GG E+ 
Sbjct: 69  IAEGDA-DMREMAEEELEGCEARLEPTELELQKLLLPKDPNDEKNCYLEVRAGTGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY+R+AE + ++ E L   +GE  G K    L+ G   Y  LK E G HR+ 
Sbjct: 128 IFSGDLFRMYSRYAETQGWRVEILSQSEGEHGGFKEIISLVSGSGVYSKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  D+  E+ I+++D RIDTYRASGAGGQHVN TDSA+R
Sbjct: 188 RVPETESQGRIHTSACTVAVMPEADELEEVNINKADLRIDTYRASGAGGQHVNKTDSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV+CQ ERSQHKN+A+A ++L  KL    +Q+     +I E  +  +G G  
Sbjct: 248 ITHIPTGIVVECQDERSQHKNRARAMSLLATKLKT--MQEEAAHKSISEERRNLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   V D R N+   S   V+ GDL+  +   
Sbjct: 306 SERIRTYNY-PQGRVTDHRINLTLYSLDAVMQGDLEPVIGPL 346


>gi|325204648|gb|ADZ00102.1| peptide chain release factor 1 [Neisseria meningitidis M01-240355]
          Length = 358

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 121/349 (34%), Positives = 174/349 (49%), Gaps = 8/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +       RL  +      P    ++   + L RE   L   +   +  Q    D  
Sbjct: 4   SILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYQLAQSDLA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E+  + +      E  +  +          Q   L     D  + ++E+ AG GG E
Sbjct: 64  DAEEMLSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEIRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR
Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  +IE++  D RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPVDLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G
Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V+DGDL +   A +A  +
Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITNALIAEHQ 349


>gi|331085530|ref|ZP_08334614.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330407417|gb|EGG86919.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 358

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 115/351 (32%), Positives = 187/351 (53%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + R   +  + ++P +  +    + LM+E+  L   +    E +        
Sbjct: 1   MFDKLEDLLIRYEEIMGELQEPDVANDQERFRKLMKEQADLAPIVEAYTEYKKAKQSIAD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
             E+   E D  + +   + L   K  VE  + E           D  +  +E+ AGAGG
Sbjct: 61  SEEMLEIESDEEMRELAKEELSSSKKRVEELEHELKILLLPKDPNDDKNIMVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            ES  +A  + RMY  +AE +++KTE + +++    G K    ++ G   Y  +K E GV
Sbjct: 121 DESALFAAEVYRMYVHYAESKRWKTEMISVNENGIGGFKEVVFMVSGQGVYSRMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + +++ I E D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMP-EAEEVDVVIEEKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLYELEL+K++  +   E+ +++IG
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQ--SAEAEARRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+GDLD+ + + +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSILNGDLDEVIDSLIAADQ 347


>gi|196231602|ref|ZP_03130460.1| peptide chain release factor 2 [Chthoniobacter flavus Ellin428]
 gi|196224455|gb|EDY18967.1| peptide chain release factor 2 [Chthoniobacter flavus Ellin428]
          Length = 350

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 149/323 (46%), Positives = 210/323 (65%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W N   A+  + E   L N I  +  +  ++ D  +L+ELA E +D + ++E  
Sbjct: 1   MAEPDFWANKERAQKNVEEVSTLRNKIGPLLTLDRQIEDLPVLIELAREANDETSVKEVE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
                I+  +   + + LL+G  D  +A+L +++GAGGTES DWA+MLLRMY RW E+  
Sbjct: 61  KEYGVIQNGLAEFELKMLLNGPNDRYNAFLTINSGAGGTESCDWADMLLRMYQRWIERHG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK+E ++I  GEEAGIKS TL + G  A+G+L  E+GVHRLVRISP+D+N RRHTSF+ +
Sbjct: 121 FKSEVMDIQLGEEAGIKSCTLKVAGEYAFGYLATERGVHRLVRISPFDANKRRHTSFAGV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + +S  IEI+E+D  +DTYR+ G GGQ+VN  ++AVRI HIPTG+V  CQ ERSQ
Sbjct: 181 DVVPELPESAPIEINEADIEVDTYRSGGKGGQNVNKVETAVRIRHIPTGIVAACQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            KNK  A  ML+AKL ++E+ K           K ++ +G QIRSYV QPYQ V DLRT 
Sbjct: 241 QKNKVTAMRMLQAKLQQIEVDKMAAETAAAYGEKADVSFGSQIRSYVFQPYQKVLDLRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
           ++ ++ S V+DGD+D F++  L 
Sbjct: 301 VDTSNISAVMDGDIDAFIQGKLR 323


>gi|302190497|ref|ZP_07266751.1| peptide chain release factor 2 [Lactobacillus iners AB-1]
          Length = 332

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 145/324 (44%), Positives = 205/324 (63%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             D   W +   A+ ++    ++   +   + +   L D    +EL   E +  +L E +
Sbjct: 1   MADDTFWNDQTNAQKIIEATNYMREKVDKYQTLSSALADAKTAVELYNMEPENDMLMEIT 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++++K E    +   LLSG+ D ++A LE+H+GAGGTE+ DWANML RMY RW +   
Sbjct: 61  AEVEKLKNEFNNYELHLLLSGKYDDHNALLEIHSGAGGTEAMDWANMLFRMYQRWCDSHN 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
              E  +   G+EAG+KS ++ ++G NA+G LK E GVHRLVRISP+DS  RRHTSF+S+
Sbjct: 121 LTFEVDDFQVGDEAGLKSVSVRVQGNNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +D SI IEI+  D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ
Sbjct: 181 EVIPEIDKSINIEINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A +MLRAKL++LE  K+ +     + ++ EI +G QIRSYV  PY MVKD RT+
Sbjct: 241 FQNRETAMDMLRAKLFKLEEDKKRKQTEALKGNQKEINFGSQIRSYVFHPYNMVKDHRTD 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E +    V++G+LD F+ A L  
Sbjct: 301 YETSDTIGVMNGNLDPFIYAYLQW 324


>gi|187476811|ref|YP_784835.1| peptide chain release factor 1 [Bordetella avium 197N]
 gi|115421397|emb|CAJ47902.1| peptide chain release factor 1 [Bordetella avium 197N]
          Length = 356

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 179/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    RL  ++    DP    ++   + L RER  L+  +      Q    D     E+
Sbjct: 5   LEQLAHRLIEVDALLADPDSAGDMDRFRRLSRERAELEPVVLAFNAFQSTQADLATAQEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +  ++ +E     +          Q   L     D    +LE+ AG GG ES  ++
Sbjct: 65  LADPEMKAMAEEEIKAARERIEVLEGELQVLLLPRDPNDGRSLFLEIRAGTGGDESALFS 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE + ++ E +     E  G K     I G  AYG LK E G HR+ R+ 
Sbjct: 125 GDLLRMYSRYAESQGWRVEIMSESPSELGGYKEVIARIDGDGAYGRLKFESGAHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  +I I+ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 185 ATEAQGRIHTSACTVAVMPEADEMNDIVINPADLRIDTFRASGAGGQHINKTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A+L + EL++R+  +      K+ +G G    +
Sbjct: 245 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKDKELRERQ--SKEAAERKSLVGSGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       +L+GDL++   A LA  +
Sbjct: 303 IRTYNY-PQGRVTDHRINLTLYKLQQILEGDLNELTGALLAEHQ 345


>gi|145632952|ref|ZP_01788685.1| peptide chain release factor 1 [Haemophilus influenzae 3655]
 gi|144986608|gb|EDJ93174.1| peptide chain release factor 1 [Haemophilus influenzae 3655]
          Length = 361

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 182/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     D  +  +  + +   +E   L++ +           +      L
Sbjct: 10  LESLKERYEELEALLGDASVISDQDKFRAYSKEYSQLEDVVKCFNRWTQLNQNIEEAEIL 69

Query: 76  ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q   +  +  I+   +  Q   L     D  + YLE+ AG GG E+  +A
Sbjct: 70  LDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 129

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG LK E G HR+ R+ 
Sbjct: 130 GDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGEGVYGQLKFESGGHRVQRVP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 190 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 249

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++       +  +  +G G +   
Sbjct: 250 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQ--TDMRRNLLGSGDRSDK 307

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      +V++G +D+ ++  +   +
Sbjct: 308 IRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQPIITEYQ 350


>gi|83858490|ref|ZP_00952012.1| peptide chain release factor 2 [Oceanicaulis alexandrii HTCC2633]
 gi|83853313|gb|EAP91165.1| peptide chain release factor 2 [Oceanicaulis alexandrii HTCC2633]
          Length = 316

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 200/309 (64%), Positives = 241/309 (77%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRER  LD +++ ++EI   L D L L E+A  E D  + Q+ ++ L+ ++      + +
Sbjct: 1   MRERNRLDQSMTEVQEIVADLADTLELAEMAEMEGDDDLYQDATEALKALRARAGKAELQ 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD ND+YLE+H GAGGTE+QDWA+ML RMYTRWAEK  FK E +E   GEEAG+
Sbjct: 61  ALLSGEADGNDSYLEIHPGAGGTEAQDWASMLARMYTRWAEKSGFKVEVIEAQAGEEAGL 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KS T+L+KG NAYGWLK E GVHRLVRISPYDS+ RRHTSF+S+W YP+VDD+IEIEI +
Sbjct: 121 KSITILVKGENAYGWLKTEAGVHRLVRISPYDSSGRRHTSFASVWTYPLVDDTIEIEIED 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D R+DTYRASGAGGQH+N TDSAVR+TH PTG+VV CQ +RSQHKN+A AW MLRA+LY
Sbjct: 181 KDVRVDTYRASGAGGQHINKTDSAVRLTHEPTGIVVACQTDRSQHKNRANAWTMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           ELELQKREE A     SKT+IGWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLDD
Sbjct: 241 ELELQKREEAAQADAESKTDIGWGHQIRSYVLQPYQMVKDLRTQVETSDTQGVLDGDLDD 300

Query: 346 FMKATLAIK 354
           FM A LA +
Sbjct: 301 FMAAALAQR 309


>gi|225575054|ref|ZP_03783664.1| hypothetical protein RUMHYD_03143 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037724|gb|EEG47970.1| hypothetical protein RUMHYD_03143 [Blautia hydrogenotrophica DSM
           10507]
          Length = 357

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 121/351 (34%), Positives = 193/351 (54%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + R   + ++  +P +  N    + LMRE+  L   +   KE ++       
Sbjct: 1   MFDKLEDLLIRFEEVLSELGEPGVADNQERFQKLMREQSELQPIVDTYKEYKENQQTIQD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            + +  EE D  + +   + L   K  V   +       L     DS +  +E+ AGAGG
Sbjct: 61  SVSMLEEESDEEMREMLKEELSDAKRRVGELENELKILLLPKDPNDSKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY ++AE R++KTE L +++    G K  T +I+G  AY  LK E GV
Sbjct: 121 DEAALFAAEIYRMYVKYAESRRWKTEMLSLNENGIGGFKEVTFMIQGQGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ + P   + I+  +  +DC+ D +RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAIMP-EAEEIDFHLDLNDCKFDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+ CQ E+SQ KNK +A  +LR++LYE+ELQK+ +     E+ ++++G
Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYEMELQKQHD--AEAEARRSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +        L+GDLD+ + + +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHRLEGTLNGDLDEVIDSLIAADQ 347


>gi|294787740|ref|ZP_06752984.1| peptide chain release factor 1 [Simonsiella muelleri ATCC 29453]
 gi|294484033|gb|EFG31716.1| peptide chain release factor 1 [Simonsiella muelleri ATCC 29453]
          Length = 358

 Score =  240 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 121/349 (34%), Positives = 181/349 (51%), Gaps = 8/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            L D   N   RL  +      P    N+   + L +E   L   +   ++ +    D  
Sbjct: 4   SLLDKLQNLAHRLEEVTALLGSPEATANMDNYRKLNQEHAELTPIVETYQQYRQAESDLA 63

Query: 71  ILLELALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E+  + +      +E      +I+      Q   L     D  + ++E+ AG GG E
Sbjct: 64  DAQEMLSDPEMKDFAAEEIEHAKTQIEQLDFELQKLLLPKDADDDKNIFIEIRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++TE +   + +  G K   + + G  AY  LK E G HR
Sbjct: 124 AALFAGDLLRMYSRFAERNRWQTEIVSASESDLGGYKEVIVRLIGLGAYSKLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  EI+++ +D RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPTTESQGRIHTSACTVAVMPEADELEEIQLNPNDLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +RITH+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G
Sbjct: 244 IRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDK--QKREAQAKEAAERKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V+DGD+++   A +A  +
Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDMEEITSALIAEHQ 349


>gi|292669720|ref|ZP_06603146.1| peptide chain release factor RF1 [Selenomonas noxia ATCC 43541]
 gi|292648517|gb|EFF66489.1| peptide chain release factor RF1 [Selenomonas noxia ATCC 43541]
          Length = 354

 Score =  240 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 110/346 (31%), Positives = 171/346 (49%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    +   L     DP +  ++ + +   RE   L   +      Q  L        L
Sbjct: 5   LNAVADKYRELEALLSDPAVMADMEKWQRYTREHAALTPIVEAYSAYQQALLTIEEDQGL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E D         +  +  +   +  Q      L     D  +  +E+  G GG E+  
Sbjct: 65  LAEADAEMKAMLEEEIAEAEERRDQLAQELPILLLPRDPNDDKNVIVEIRGGVGGEEAAL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY R+AE++ ++TE L  +  E  G K  + L+ G  AY  LK E G HR+ R
Sbjct: 125 FAASLFRMYARYAERQGWRTEILSSNPTEIGGFKEISFLVNGAGAYSRLKYESGTHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           I   +S  R HTS  ++ V P   + +E+ I  +D RIDTY ASGAGGQ+VN T++A+RI
Sbjct: 185 IPVTESGGRIHTSAVTVAVLP-EAEDVEVTIDPNDLRIDTYCASGAGGQYVNRTETAIRI 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIP+G+VVQCQ E+SQ KN+ +A  +LRA+LY+    ++E+   +    ++++G G   
Sbjct: 244 THIPSGIVVQCQDEKSQLKNREKAMKVLRARLYD--RARQEQADAVAADRRSQVGSGDRS 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       VLDG+LD+ +   +   +
Sbjct: 302 ERIRTYNF-PQGRVTDHRIGLTLYKIDAVLDGELDEILAGLITADQ 346


>gi|260914191|ref|ZP_05920664.1| peptide chain release factor RF1 [Pasteurella dagmatis ATCC 43325]
 gi|260631824|gb|EEX50002.1| peptide chain release factor RF1 [Pasteurella dagmatis ATCC 43325]
          Length = 360

 Score =  240 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 186/344 (54%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+  +R   L     D  +  +  + +   +E   L++ +           +      L
Sbjct: 9   LDSLKERHEELEALLGDASVISDQEKFRAYSKEYAQLEDVVKCFARWNQLNSNIEEAQLL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +     + QE  +  +    +VE + Q   L     D  + YLE+ AG GG E+  +A
Sbjct: 69  LDDLSMKEMAQEEIEECKAELEQVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEGKRWRIEVLSANESEQGGYKEIIVKVSGEGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ SD RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESELPEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++E+     ++ +  +G G +   
Sbjct: 249 IPTGIVVECQDERSQHKNKAKALSVLASRIVQAEKERQEQ--QQADTRRNLLGSGDRSDK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      +V++G +D+ ++  +   +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 349


>gi|221135300|ref|ZP_03561603.1| peptide chain release factor 1 [Glaciecola sp. HTCC2999]
          Length = 361

 Score =  240 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 118/339 (34%), Positives = 185/339 (54%), Gaps = 9/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  +    + L +E   L++ +   ++ Q    D     E+
Sbjct: 9   LETLVERFEEVQALLGDPDVIGDQNRFRSLSKEYAQLEDVVKSFRDYQGAQEDLASANEM 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D         +       I+   +  Q   L     D ++ +LE+ AGAGG E+  
Sbjct: 69  MQEDDAEMREMAQEEIKAAKASIETLEQALQILLLPRDPQDDSNCFLEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE + ++ + +  ++GE  G K     I G  AYG +K E G HR+ R
Sbjct: 129 FAGDLYRMYSRYAETKGWRVDLVSANEGEHGGYKEVIANIIGDGAYGVMKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   V +S  I+I+ +D R+DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVAVLAEVAESEAIDINPADLRVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIP+GVVV+CQ ERSQHKN+A+A ++L+++L  +E +KR+       + K+ +G G   
Sbjct: 249 THIPSGVVVECQDERSQHKNRAKAMSVLQSRLNNIEKEKRDAE--EASTRKSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +IR+Y   P   V D R N+      DV+ GD+D  ++
Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLDDVVAGDVDALLE 344


>gi|184200580|ref|YP_001854787.1| peptide chain release factor 2 [Kocuria rhizophila DC2201]
 gi|183580810|dbj|BAG29281.1| peptide chain release factor 2 [Kocuria rhizophila DC2201]
          Length = 372

 Score =  240 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 138/352 (39%), Positives = 220/352 (62%), Gaps = 1/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L    + +  + D +  ++ ++ L  +   P LW N  EA+ +  +  H  + +  +++I
Sbjct: 13  LRATYDSVAAVSDAEMLLKEITELEQQAAAPDLWDNPDEAQKVTSQLSHKQSKVDRLRKI 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +++ELA +EDD      ++  L  I+  +   + ++LL+GE D  +A + + 
Sbjct: 73  ESRIDDLEVMVELAEDEDDQETRDASATELTSIQKALSELEIQTLLAGEYDEREAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ D+A +L+RMY RWAE+  + T+ L+    EEAG+KSAT  +K P A+G L 
Sbjct: 133 SGAGGVDAADFAEILMRMYLRWAERHGYPTKVLDTSYAEEAGLKSATFEVKAPYAFGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+++ V P+++    +EI E++ ++D +R+SG GGQ 
Sbjct: 193 VEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIESDDTVEIPETELKVDVFRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L  ++ +         
Sbjct: 253 VNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLLRQEEADAKKKEMAGD 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  WG Q+RSYVL PYQMVKDLRTN E+ +PS V DG +D F+   +  +
Sbjct: 313 -VKASWGDQMRSYVLNPYQMVKDLRTNYEEGNPSSVFDGGIDSFIDEGIRWR 363


>gi|119361546|sp|Q4QKS1|RF1_HAEI8 RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 360

 Score =  240 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 180/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     D  +  +  + +   +E   L+  +           +      L
Sbjct: 9   LESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQNIEEAEIL 68

Query: 76  ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q   +  +  I+   +  Q   L     D  + YLE+ AG GG E+  +A
Sbjct: 69  LDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE +++  E L  ++ E+ G K   + + G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESKRWCVEMLSANESEQGGYKEVIVKVSGEGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++       +  +  +G G +   
Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQ--TDMRRNLLGSGDRSDK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      +V++G +D+ ++  +   +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQPIITEYQ 349


>gi|302338432|ref|YP_003803638.1| peptide chain release factor 2 [Spirochaeta smaragdinae DSM 11293]
 gi|301635617|gb|ADK81044.1| peptide chain release factor 2 [Spirochaeta smaragdinae DSM 11293]
          Length = 339

 Score =  240 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 160/335 (47%), Positives = 214/335 (63%), Gaps = 1/335 (0%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q +  L  ++  P  W++   A+  + E + L   +   K++     D   L ELA EE 
Sbjct: 3   QEIKVLEAESGSPEFWEDRERAEKRLGELKRLHKRLDPWKDLLSSFEDLETLFELAAEEQ 62

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D S   +    L  +           +  GE D ++A+L +H+GAGGTE+ DW  MLLRM
Sbjct: 63  DESQEHDIKRQLDEVGDTYRGLNLTEMFQGEFDGSNAFLTIHSGAGGTEACDWTAMLLRM 122

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           YTRWAE+R+F  + L++ + E  G+KS TL I G   +G+LK E GVHRLVRISP+DS+ 
Sbjct: 123 YTRWAERREFSVQTLDLLEAE-GGVKSVTLQINGDFVFGYLKSEIGVHRLVRISPFDSSG 181

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           RRHTSF+S+++ PV+DD IE++I   + RIDTYRA GAGGQHVN TDSAVRITHI TG+V
Sbjct: 182 RRHTSFASVYISPVIDDDIEVDIKPEELRIDTYRAQGAGGQHVNKTDSAVRITHISTGIV 241

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           VQCQ ERSQ+KNKA A  +LR++LYE   +++E+        K EI WG QIRSYV QPY
Sbjct: 242 VQCQNERSQYKNKAMALKILRSRLYEHYKKEQEKEQEKHAQEKKEISWGNQIRSYVFQPY 301

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            MVKD RT  E  +   V+DG++DDF+ A L   +
Sbjct: 302 TMVKDHRTKHEVGNIQAVMDGEIDDFIIAFLNWMQ 336


>gi|119361511|sp|Q2KZZ3|RF1_BORA1 RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 360

 Score =  240 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 179/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    RL  ++    DP    ++   + L RER  L+  +      Q    D     E+
Sbjct: 9   LEQLAHRLIEVDALLADPDSAGDMDRFRRLSRERAELEPVVLAFNAFQSTQADLATAQEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +  ++ +E     +          Q   L     D    +LE+ AG GG ES  ++
Sbjct: 69  LADPEMKAMAEEEIKAARERIEVLEGELQVLLLPRDPNDGRSLFLEIRAGTGGDESALFS 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE + ++ E +     E  G K     I G  AYG LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRYAESQGWRVEIMSESPSELGGYKEVIARIDGDGAYGRLKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  +I I+ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATEAQGRIHTSACTVAVMPEADEMNDIVINPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A+L + EL++R+  +      K+ +G G    +
Sbjct: 249 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKDKELRERQ--SKEAAERKSLVGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       +L+GDL++   A LA  +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLYKLQQILEGDLNELTGALLAEHQ 349


>gi|56460033|ref|YP_155314.1| protein chain release factor A [Idiomarina loihiensis L2TR]
 gi|61214579|sp|Q5QUZ8|RF1_IDILO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56179043|gb|AAV81765.1| Protein chain release factor A [Idiomarina loihiensis L2TR]
          Length = 364

 Score =  240 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 121/346 (34%), Positives = 185/346 (53%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     +P +  +    + L RE   L+  +   +E +    D     ++
Sbjct: 10  LEGLVERYQEVQALLGEPDVISDQNRFRSLSREYSQLEEVVGCFEEYRQNQDDQAAAKDM 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL---LSGEADSNDAYLEVHAGAGGTESQD 132
           A ++D         +  +  K E E +    L        D    YLE+ AGAGG E+  
Sbjct: 70  AEDDDAEMREMAEEELKEARKAEEELENRLQLLLLPKDPNDDRSCYLEIRAGAGGDEASI 129

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AEK  +K   +   DGE  G K     + G   YG +K E G HR+ R
Sbjct: 130 FAGDLFRMYSRYAEKNGWKVNIVSASDGEHGGYKEIIAHMSGDGVYGRMKFESGGHRVQR 189

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P + ++  +EI+ +D R+DTYRASGAGGQHVN TDSA+R+
Sbjct: 190 VPETESQGRIHTSACTVAVLPEIPEAEAVEINPADLRVDTYRASGAGGQHVNRTDSAIRL 249

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTGVVV+CQ+ERSQHKN+A+A ++L+A++  LE +KR+   +   + +  +G G   
Sbjct: 250 THIPTGVVVECQEERSQHKNRAKAMSVLQARIQRLEDEKRQAEED--STRRNLVGSGDRS 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+      +VL GD+D  + A +   +
Sbjct: 308 ERIRTYNY-PQSRVTDHRINLTLYRLDEVLTGDIDLILDAIITEHQ 352


>gi|83814103|ref|YP_445897.1| peptide chain release factor 2 [Salinibacter ruber DSM 13855]
 gi|83755497|gb|ABC43610.1| peptide chain release factor 2 [Salinibacter ruber DSM 13855]
          Length = 378

 Score =  240 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 153/357 (42%), Positives = 223/357 (62%), Gaps = 8/357 (2%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ ++  LGG  D D     +  LN +  DP  W +   A+ + +     +  I   ++
Sbjct: 11  QLAERVEALGGYLDVDGRRMTVEELNQERMDPDFWDDPDRAREIEKRIAREEEWIEAWED 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++++  D   L  L+ E +   +  E     ++++ +++  + ESLL    D  DA +E+
Sbjct: 71  VKEQAEDIETLQLLSEE-EGEDMSDEIDAEARKLEQKLDRLELESLLDDPDDERDAIVEI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           + GAGGTESQDWA MLLRMY RWAE + +  E +    GEEAGIKSATL ++G +AYG L
Sbjct: 130 NPGAGGTESQDWAEMLLRMYMRWAEDQDYDVELVHQQPGEEAGIKSATLNVQGRHAYGRL 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP+D++SRRHTSF+S++VYP VDDSI +++SE +  + T+R+ G GGQ
Sbjct: 190 KSETGVHRLVRISPFDADSRRHTSFASVFVYPEVDDSIGVDLSEGEIELQTFRSGGKGGQ 249

Query: 242 HVNTTDSAVRITH-------IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           HVN  ++ VR+           T V   C QERSQH+N+ +A  ML++++Y+ E + +EE
Sbjct: 250 HVNKVETGVRLIWTGTLSNGEETTVRAACTQERSQHQNRRRAREMLKSRIYQAERELKEE 309

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                ESSK  I WG QIRSYVL PY+MV D RT+ ++     VL+G+LD F+KA L
Sbjct: 310 EKERLESSKKSIEWGSQIRSYVLHPYKMVNDHRTDTKRNDAEAVLEGELDPFIKAYL 366


>gi|237745909|ref|ZP_04576389.1| peptide chain release factor 1 [Oxalobacter formigenes HOxBLS]
 gi|229377260|gb|EEO27351.1| peptide chain release factor 1 [Oxalobacter formigenes HOxBLS]
          Length = 360

 Score =  240 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 186/344 (54%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   RL+ ++     P +  +    + L RE   L   ++  ++      D     E+
Sbjct: 9   LEHLSDRLAEIDELLMQPEVVSDQENYRKLNREHAELAPVVALYRDFSQVRQDIDTAREM 68

Query: 76  ALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +     Q+  D  ++      E  Q   L     D  + YLE+ AG GG ES  +A
Sbjct: 69  LADPEMKEFAQQEIDGAEKKIAGIEEELQLMLLPKDPDDGKNIYLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AEK ++K E +     E  G +   + + G + Y  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYTRFAEKNRWKAEIVSASMSELGGYREVIVRLVGKDVYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  DD  ++ I+ +D R+DT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 VTETQGRIHTSACTVAVMPEADDVSDVHINPADIRVDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQHKNKAQA  +L A++ + ++Q+++  A    + K+ IG G    +
Sbjct: 249 LPTGIVVECQDDRSQHKNKAQAMQVLAARIKDRQMQEQQ--AKEAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       ++DGD+D+ + A +A  +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLYKLEFIMDGDMDELVSALVAEHR 349


>gi|307689287|ref|ZP_07631733.1| peptide chain release factor 2 [Clostridium cellulovorans 743B]
          Length = 329

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 154/322 (47%), Positives = 217/322 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++   W N+  A+ +    + + + I      Q  + D  +L+E+A+EE+D S++ E  
Sbjct: 1   MQESGFWDNLERAQSVTARAKGIKDRIDLYNNFQSSVEDIKVLIEMAIEENDSSLVTEVY 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + +  +   VE  + E +LSGE D+N+A + +H+G GGT++ DW  MLLRMYTRW EK+ 
Sbjct: 61  NEISTLSDSVENLRLELMLSGEYDTNNAIVTLHSGVGGTDAMDWTEMLLRMYTRWCEKKA 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L++  G+EAGIKSATL + G  AYG+LK E+G+HRLVRISP+++N +R TSF+S+
Sbjct: 121 FNVETLDLQVGDEAGIKSATLKVTGLYAYGYLKAEKGIHRLVRISPFNANGKRQTSFASL 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +     +EI+ SD ++DTYRASGAGGQHVN T+SA+RITHIPTG+VVQCQ ERSQ
Sbjct: 181 EVTPELRQDQNVEINPSDLKVDTYRASGAGGQHVNKTESAIRITHIPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A NML++KL EL+ +  +E          ++GWG QIRSYV  PY MVKD RTN
Sbjct: 241 IQNRETALNMLKSKLVELKERAHKEKIEDLTGDLKDMGWGSQIRSYVFHPYTMVKDHRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
           I+      V+DG+LD F+K  L
Sbjct: 301 IQVNDVYKVMDGELDVFIKGYL 322


>gi|255348832|ref|ZP_05380839.1| peptide chain release factor 2 [Chlamydia trachomatis 70]
 gi|255503372|ref|ZP_05381762.1| peptide chain release factor 2 [Chlamydia trachomatis 70s]
 gi|255507050|ref|ZP_05382689.1| peptide chain release factor 2 [Chlamydia trachomatis D(s)2923]
 gi|296435060|gb|ADH17238.1| peptide chain release factor 2 [Chlamydia trachomatis E/150]
 gi|296438780|gb|ADH20933.1| peptide chain release factor 2 [Chlamydia trachomatis E/11023]
          Length = 334

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 156/326 (47%), Positives = 204/326 (62%), Gaps = 1/326 (0%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             +      W +V  A  +      L   +S   E+++++      LE      D  + +
Sbjct: 2   EQQAVQDGFWDDVARAGKISERIARLKQQLSEFNELKNKVSTIQFFLEDEESSKDLEMQK 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E        + ++   +   LLSGE D N  +L ++AGAGGTES DW  MLLRMY RWA 
Sbjct: 62  ELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRWAS 121

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
              ++ E ++  DGE AGIK  TL + G  AYG+ K E GVHRLVRISP+DSN++RHTSF
Sbjct: 122 SHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSF 181

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
            S+ V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ E
Sbjct: 182 VSVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNE 241

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQ +N+    NMLRA++Y+  LQ+R E  NI   +K EI WG QIR+YV QPY +VKD+
Sbjct: 242 RSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDV 301

Query: 327 RTNIEKTSPSDVLDGD-LDDFMKATL 351
           RT  E  +   ++DG+ LD F+KA L
Sbjct: 302 RTGYEVGNIQAMMDGELLDAFIKAYL 327


>gi|161507200|ref|YP_001577154.1| peptide chain release factor 2 [Lactobacillus helveticus DPC 4571]
 gi|160348189|gb|ABX26863.1| Peptide chain release factor 2 [Lactobacillus helveticus DPC 4571]
 gi|328461868|gb|EGF34090.1| peptide chain release factor 2 [Lactobacillus helveticus MTCC 5463]
          Length = 332

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 151/324 (46%), Positives = 200/324 (61%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
                 W +   A+ L+ +   L        ++Q    D L  LEL   E D  + QE  
Sbjct: 1   MMQTGFWDDQEGAQKLISDNNLLKEKRDSFLKLQQDYEDELTALELLRAEPDADLQQEVE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L+ ++      + + LLSG+ DS++A LE+H GAGGTE+ DW  ML RMY R+ +   
Sbjct: 61  TDLKDLQEAFHNYELDLLLSGKYDSHNALLEIHPGAGGTEAMDWGQMLFRMYQRYCDAAG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E  +   GEEAG+KS ++ I G NAYG LK E GVHRLVRISP+D+  RRHTSF+S+
Sbjct: 121 FKFEINDYEPGEEAGLKSVSVRISGNNAYGMLKSENGVHRLVRISPFDAAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDSI+I+I   D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ
Sbjct: 181 EVIPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A N LRAKL+ LE +K+ +     +  + EIGWG QIRSYV  PY +VKDLRT 
Sbjct: 241 LQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E    + V+DG L  F+ + L  
Sbjct: 301 YETADVNGVMDGKLQPFIYSYLQW 324


>gi|332299528|ref|YP_004441449.1| peptide chain release factor 2 [Porphyromonas asaccharolytica DSM
           20707]
 gi|332176591|gb|AEE12281.1| peptide chain release factor 2 [Porphyromonas asaccharolytica DSM
           20707]
          Length = 373

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 139/360 (38%), Positives = 211/360 (58%), Gaps = 11/360 (3%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +   LG   D D    +L     +T+ P  W +V  A+  MR    + + I   + 
Sbjct: 9   ELLERTKALGRYLDIDQRRVQLEEEELRTQAPDFWDDVPRAQQQMRRVGEIRSWIEAFEA 68

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +     +  +  +     ++    Q+  D   R    VE  +  ++LS E D   A L++
Sbjct: 69  VDAATQEVALAYDFYK--EEAIEEQDVDDAYARAIKLVEDLELRNMLSAEEDRLGAVLKI 126

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTESQDWA+ML+RMY RWAE+  +K       DG++AGIK+ T+ I+G  AYG+L
Sbjct: 127 NAGAGGTESQDWASMLVRMYQRWAERSGYKVTITNWQDGDDAGIKTVTMQIEGELAYGFL 186

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+E++      DT+R+SGAGGQ
Sbjct: 187 KSENGVHRLVRVSPYNAQGKRMTSFASVFVVPLVDDSIEVEVNPGLLSWDTFRSSGAGGQ 246

Query: 242 HVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  ++ VR+ +  T         +V++  + RSQ  N+  A  +LR++LY+ EL++R 
Sbjct: 247 NVNKVETGVRLHYQYTDPDTGETEEIVIENTETRSQMDNRENALRLLRSQLYDKELERRR 306

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
              +  E++K +I WG QIRSYV    + VKD RT  + +  + V+DGDLD F+KA L  
Sbjct: 307 AAQSEVEANKKKIEWGSQIRSYVFDD-RRVKDHRTGYQTSDVNGVMDGDLDAFIKAYLMQ 365


>gi|154248590|ref|YP_001419548.1| peptide chain release factor 2 [Xanthobacter autotrophicus Py2]
 gi|154162675|gb|ABS69891.1| peptide chain release factor 2 [Xanthobacter autotrophicus Py2]
          Length = 322

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 189/309 (61%), Positives = 240/309 (77%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L++ +  I  +   L DN+ L+EL   E D  ++ E S +L  +K E+  ++ E
Sbjct: 1   MQERTTLEDGLGAIDRVLRDLDDNIELIELGEAEGDEGVITEASASLDGLKAELARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEADSND+YLEVHAGAGGT+SQDWA MLLRMY RW E+  FK E ++   GE+AG+
Sbjct: 61  ALLSGEADSNDSYLEVHAGAGGTDSQDWAEMLLRMYRRWCERHGFKVELMDESQGEQAGL 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ +KG NAYGWLK E GVHRLVRISP+DSN+RR TSF+S+ VYPVVDD I ++I E
Sbjct: 121 KSATIQVKGHNAYGWLKTEAGVHRLVRISPFDSNARRQTSFASVDVYPVVDDRIVVDIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D R+DT R+ GAGGQHVN T+SAVR+THIPTG+ V  + +RSQHKN+A AWNMLRAKLY
Sbjct: 181 ADVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGIAVVSEGDRSQHKNRATAWNMLRAKLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           +LEL+KRE  A   +++KT+IGWG QIRSYVLQPYQ+VKDLRT +   +P +VLDGDLD 
Sbjct: 241 DLELKKREAEAAAEQAAKTDIGWGHQIRSYVLQPYQLVKDLRTGVTSGTPQEVLDGDLDP 300

Query: 346 FMKATLAIK 354
           FM+A LA +
Sbjct: 301 FMQAALAQR 309


>gi|257459323|ref|ZP_05624436.1| peptide chain release factor 2 [Campylobacter gracilis RM3268]
 gi|257443252|gb|EEV18382.1| peptide chain release factor 2 [Campylobacter gracilis RM3268]
          Length = 365

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 159/352 (45%), Positives = 225/352 (63%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS ++  + G+   +N   RL  +     D +LWQ++ +A  + +E+  + N ++     
Sbjct: 13  LSIKVENIAGVVKPENIKARLKEIEELENDQNLWQDIAKAGAIGKEKTKISNILNKFLNA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ + D   L ELA  E+D   +         ++ ++   +   +LSGE D  +A + +H
Sbjct: 73  KNAVDDAKALYELANSENDEETINSLFAEADELEDKIINLEISMMLSGENDDKNAIVSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTES DWA+ML RMY R+ E+  FK E L+  +GEEAG+K  + +++G NAYG+LK
Sbjct: 133 PGAGGTESNDWASMLYRMYLRFCEREGFKIEVLDFQEGEEAGLKDVSFIVRGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR+SP+DS  RRHTSFSS+ V P ++D IEI I E D R+D +RASGAGGQH
Sbjct: 193 AENGIHRLVRVSPFDSAGRRHTSFSSVMVSPELNDDIEINIEEKDIRVDVFRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           +N T+SAVRITHIPTG+VV CQ +RSQHKNK  A  +L+++LYELEL K+ E        
Sbjct: 253 INKTESAVRITHIPTGIVVNCQNDRSQHKNKETAMKVLKSRLYELELMKQREKDENA--P 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYVL PYQ VKD R+    +    +LDGD+   ++  L  +
Sbjct: 311 KSEIGWGHQIRSYVLFPYQQVKDNRSGEAYSQTDAILDGDIKSIIEGVLISQ 362


>gi|68249924|ref|YP_249036.1| peptide chain release factor 1 [Haemophilus influenzae 86-028NP]
 gi|68058123|gb|AAX88376.1| peptide chain release factor 1 [Haemophilus influenzae 86-028NP]
          Length = 361

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 180/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     D  +  +  + +   +E   L+  +           +      L
Sbjct: 10  LESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQNIEEAEIL 69

Query: 76  ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q   +  +  I+   +  Q   L     D  + YLE+ AG GG E+  +A
Sbjct: 70  LDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 129

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE +++  E L  ++ E+ G K   + + G   YG LK E G HR+ R+ 
Sbjct: 130 GDLFRMYSRYAESKRWCVEMLSANESEQGGYKEVIVKVSGEGVYGQLKFESGGHRVQRVP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 190 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 249

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++       +  +  +G G +   
Sbjct: 250 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQ--TDMRRNLLGSGDRSDK 307

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      +V++G +D+ ++  +   +
Sbjct: 308 IRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQPIITEYQ 350


>gi|170751458|ref|YP_001757718.1| peptide chain release factor 2 [Methylobacterium radiotolerans JCM
           2831]
 gi|170657980|gb|ACB27035.1| peptide chain release factor 2 [Methylobacterium radiotolerans JCM
           2831]
          Length = 321

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 218/309 (70%), Positives = 254/309 (82%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD A++ IK+++  L D   L+EL   E D S ++E    +  ++ E   +Q E
Sbjct: 1   MRERQQLDEAVTAIKKLERDLEDGATLIELGEMEGDESSIREGEAAILAVEKEAASRQVE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWANML RMY RWAE+RK+K E +E+ DGEEAGI
Sbjct: 61  TLLSGEADGFDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKYKVEVVEMTDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K ATLLIKG NAYGWLK E GVHRLVRISPYDS++RRHTSF+S+WVYPV+DD IEIEI E
Sbjct: 121 KGATLLIKGHNAYGWLKTESGVHRLVRISPYDSSARRHTSFASVWVYPVIDDRIEIEIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYR+SGAGGQHVNTTDSAVRITH PTG+VV CQQERSQHKN+A AWNMLRA+LY
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHNPTGIVVACQQERSQHKNRATAWNMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           ELEL+KREE AN   ++KT+IGWG QIRSYVLQPYQ+VKDLRT  + T P +VLDGDLD 
Sbjct: 241 ELELKKREEKANAEAAAKTDIGWGHQIRSYVLQPYQLVKDLRTGTQSTDPDEVLDGDLDP 300

Query: 346 FMKATLAIK 354
           FM+A+LA +
Sbjct: 301 FMEASLAQR 309


>gi|308050535|ref|YP_003914101.1| bacterial peptide chain release factor 1 (bRF-1) [Ferrimonas
           balearica DSM 9799]
 gi|307632725|gb|ADN77027.1| bacterial peptide chain release factor 1 (bRF-1) [Ferrimonas
           balearica DSM 9799]
          Length = 360

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 180/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     +P +  +    + L +E   L+  ++     Q    D     E+
Sbjct: 9   LEGLQERYEEVQALLGEPDVIADQDRFRQLSKEYSQLEAVVNAFLAYQQNQEDIATATEM 68

Query: 76  ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E     +   +   +  Q   L     D   A++E+ AGAGG E+  +A
Sbjct: 69  LADPEMKEMAEEELAEARAQTEALEQELQILLLPKDPNDDRSAFVEIRAGAGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE++ +  E +   DGE  G K       G + YG LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRYAEQKGWSVELMSASDGEHGGYKEVIAKFSGDSVYGELKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P V ++  IEI+ +D ++DT+RASGAGGQHVN TDSAVRITH
Sbjct: 189 ATESQGRIHTSACTVVVMPEVPEAEAIEINPADLKVDTFRASGAGGQHVNKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG VV+CQ ERSQHKN+A+A  +L A+L   E +KR+       + ++ +  G    +
Sbjct: 249 LPTGTVVECQDERSQHKNRAKAMAVLSARLQAAEDEKRKAE--ETSTRRSLVASGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+     ++V++G+L   M+  L   +
Sbjct: 307 IRTYNY-PQGRVSDHRINLTLYRLTEVMEGELSALMQPILQEHQ 349


>gi|218768706|ref|YP_002343218.1| peptide chain release factor 1 [Neisseria meningitidis Z2491]
 gi|20139350|sp|Q9JT75|RF1_NEIMA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|121052714|emb|CAM09057.1| peptide chain release factor I [Neisseria meningitidis Z2491]
          Length = 358

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 120/349 (34%), Positives = 175/349 (50%), Gaps = 8/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +       RL  +      P    ++   + L RE   L   +   +  +    D  
Sbjct: 4   SILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQSDLA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E+  + +      E  +  +          Q   L     D  + ++E+ AG GG E
Sbjct: 64  DAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR
Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G
Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V+DGDL +   A +A  +
Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITNALIAEHQ 349


>gi|153854177|ref|ZP_01995485.1| hypothetical protein DORLON_01476 [Dorea longicatena DSM 13814]
 gi|149753226|gb|EDM63157.1| hypothetical protein DORLON_01476 [Dorea longicatena DSM 13814]
          Length = 358

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 121/351 (34%), Positives = 190/351 (54%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++   RL  +  + ++P +  +    + LM+E+  L   +    E ++       
Sbjct: 1   MFDKLEDLRIRLDEILNELQEPDVANDQNRFRKLMKEQNDLTPIVEAYNEYKECKQAIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            LE+  EE D  + +   + L   K  VE  +       L     D  +  +E+ AGAGG
Sbjct: 61  SLEMLEEESDEEMRELAKEELNDNKKRVEELEQELKILLLPKDPNDEKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE +++K E +E  +    G+K+ T +I G  AY  +K E GV
Sbjct: 121 DEAALFAAEIYRMYMHYAESQRWKVELVECEEIGIGGMKNVTFMIDGKGAYSKMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + ++I+I E D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMP-EAEDVDIQIDEKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LRAKLY+LE QKR +     E+ K++IG
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKDKAFALLRAKLYDLECQKRHD--AEAEARKSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++GD+ + + A +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIGLTLYKLDKIMNGDIQEIIDACIAADQ 347


>gi|15807620|ref|NP_293897.1| peptide chain release factor 2 [Deinococcus radiodurans R1]
          Length = 421

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 141/344 (40%), Positives = 203/344 (59%), Gaps = 6/344 (1%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G  FD     +RL+ L+ +  DP LW +   A+ + +E   +   +     +        
Sbjct: 69  GSTFDIPGKTRRLNELDRELSDPDLWNDQSRARQVTQEAGSVRKIVEEYAGLTSDAQGLS 128

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            +L+LA EE+   +  E +      +  V+    E+L + +     A + V  GAGGTE+
Sbjct: 129 EMLDLADEEERELLEDEQAGL----QKRVDDLYRETLFTMKHADTAAIVRVKGGAGGTEA 184

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA ML RMY RWAE+R +K + L+   G++AG +S   +I+G  A+G +  E GVHRL
Sbjct: 185 QDWAGMLARMYMRWAERRGYKVDILDEVAGDQAGYQSIEFIIRGEKAFGMMAPEHGVHRL 244

Query: 191 VRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           VR+SP+DSN+RR TSF+S+ V P   ++ I I I +SD R D +R+ GAGGQ VNTTDSA
Sbjct: 245 VRVSPFDSNNRRQTSFASVDVVPEVPEEEINIHIPDSDLRRDVFRSQGAGGQGVNTTDSA 304

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+TH+PTG+ V CQ  RSQ KN   A  +L+ +LY++E++KRE         + ++ WG
Sbjct: 305 VRLTHLPTGIAVACQITRSQIKNHELALQILKQRLYDIEMKKREAEELAARGQQAKVEWG 364

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            Q+RSYVL     +KD RT +   +P DVLDGDLD+ M A L  
Sbjct: 365 SQMRSYVLDKQ-YIKDHRTGLMMHNPDDVLDGDLDELMWAGLEW 407


>gi|325660746|ref|ZP_08149374.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472820|gb|EGC76030.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 356

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 115/351 (32%), Positives = 187/351 (53%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + R   +  + ++P +  +    + LM+E+  L   +    E +        
Sbjct: 1   MFDKLEDLLIRYEEIMGELQEPDVANDQERFRKLMKEQADLAPIVEAYTEYKKAKQSIAD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
             E+   E D  + +   + L   K  VE  + E           D  +  +E+ AGAGG
Sbjct: 61  SEEMLEIESDEEMRELAKEELSSSKKRVEELEHELKILLLPKDPNDDKNIMVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            ES  +A  + RMY  +AE +++KTE + +++    G K    ++ G   Y  +K E GV
Sbjct: 121 DESALFAAEVYRMYVHYAESKRWKTEMISVNENGIGGFKEVVFMVSGQGVYSRMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + +++ I E D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMP-EAEEVDVVIEEKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLYELEL+K++  +   E+ +++IG
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQ--SAEAEARRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+GDLD+ + + +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSILNGDLDEVIDSLIAADQ 347


>gi|307719604|ref|YP_003875136.1| peptide chain release factor 1 [Spirochaeta thermophila DSM 6192]
 gi|306533329|gb|ADN02863.1| peptide chain release factor 1 [Spirochaeta thermophila DSM 6192]
          Length = 357

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 115/342 (33%), Positives = 180/342 (52%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  + R   L     DP ++ +    + L +E  HL   +   +E +           +
Sbjct: 7   IEELITRFKELEEALADPSIFNDQKRYRELAQEHAHLSQVVRTAEEYRRLEARLEEAKTV 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EEDD  + +   + ++ ++ ++ + +       +     D  +  LE+ AG GG E+ 
Sbjct: 67  LEEEDDHELKEMAREEIKALEDQILHTEQRLKLLLVPPDPLDGKNIILEIRAGTGGEEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE++ +K E +E  + E  G +     I G   YG L+ E G HR+ 
Sbjct: 127 LFAADLYRMYARYAERKGWKMEIMEASETELGGFRELVCAISGKEVYGHLRFESGGHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS  ++ V P  +++    I   D R+D +R+SG GGQ VNTTDSAVR
Sbjct: 187 RIPVTESGGRIHTSAVTVAVLPEPEETEVE-IRPEDIRVDVFRSSGPGGQSVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ E+SQHKNKA+A  +LRA+LY  E++K+ + +      +++IG G  
Sbjct: 246 ITHLPTGLVVTCQDEKSQHKNKAKALKILRARLY--EMEKQRQESERAAMRRSQIGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   V D R N+       V+DGDLD+ + A 
Sbjct: 304 SERIRTYNF-PQNRVTDHRINLTLYKLEAVMDGDLDEIIDAL 344


>gi|304438485|ref|ZP_07398425.1| peptide chain release factor RF1 [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|304368568|gb|EFM22253.1| peptide chain release factor RF1 [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 354

 Score =  239 bits (610), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 174/346 (50%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL---CDNLIL 72
                 +   L T   DP +  ++   +   RE   L   +   +  +  L    ++  +
Sbjct: 5   LAAVEDKYRELETLLSDPSVMADMAVWQRYTREHAALTPIVEAYQSYRRALATIDEDKEM 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L  A  E    + +E ++                L     D  +  +E+  G GG E+  
Sbjct: 65  LAEADAEMKAMLTEEIAEAEAERDRLAAELPILLLPRDPNDDKNVIVEIRGGVGGEEAAL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY R+AE++ ++TE L  +  E  G K  T L+ G  AY  LK E G HR+ R
Sbjct: 125 FAASLFRMYARYAERQGWRTEVLSSNPTEIGGFKEITFLVSGAGAYSKLKYESGTHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           I   +S  R HTS  ++ V P   + +E+ I  +D RIDTY ASGAGGQ+VN T++A+RI
Sbjct: 185 IPVTESGGRIHTSAVTVAVLP-EAEEVEVTIDPNDLRIDTYCASGAGGQYVNRTETAIRI 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VVQCQ E+SQ KN+ +A  +LRA+LY+    ++E+   +    ++++G G   
Sbjct: 244 THIPTGIVVQCQDEKSQLKNREKAMKVLRARLYD--RAQQEQADAVAADRRSQVGSGDRS 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       V+DG+LD+ +   +   +
Sbjct: 302 ERIRTYNF-PQGRVTDHRIGLTLYKIDAVMDGELDELLAGLITADQ 346


>gi|255327042|ref|ZP_05368118.1| peptide chain release factor 2 [Rothia mucilaginosa ATCC 25296]
 gi|255296259|gb|EET75600.1| peptide chain release factor 2 [Rothia mucilaginosa ATCC 25296]
          Length = 375

 Score =  239 bits (610), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 137/356 (38%), Positives = 216/356 (60%), Gaps = 4/356 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L      +  + D +   + +  L+ +   P LW +V  A+ +     +  + ++ ++ 
Sbjct: 12  ELRAIFTSIAAVSDIEGIERAIEDLSAQAAAPDLWDDVENAQKVTSALSYKQSELNRLRS 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQ---ETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           +  R+ D  +++ELA  ED+ +  +   +       I+ ++E  +   LLSGE D  +A 
Sbjct: 72  LSSRIDDVEVMVELAEAEDEETAAELLADAERECAEIRAKLEELEVLVLLSGEYDQREAV 131

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ D+A MLLRMY RWAEK  + T+ L+    EEAG+KS T  +  P A+
Sbjct: 132 VTIRSGAGGVDAADFAEMLLRMYLRWAEKNGYPTKVLDTSYAEEAGLKSVTFEVNAPYAF 191

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  IEI ES+ ++D +R+SG 
Sbjct: 192 GRLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDAIEIPESEIKVDVFRSSGP 251

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVR+TH+PTG+VV  Q E+SQ +N+A A  +L+++L  L  ++ +     
Sbjct: 252 GGQSVNTTDSAVRMTHLPTGIVVSMQNEKSQLQNRAAALRVLQSRLLLLRKEQEDAKKKE 311

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                 +  WG Q+RSYVL PYQMVKDLRT  E+ + S+VLDG L+ F+ A +  +
Sbjct: 312 LAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYEEGNTSNVLDGGLNAFIDAGIRWR 366


>gi|308389808|gb|ADO32128.1| peptide chain release factor I [Neisseria meningitidis alpha710]
 gi|325130724|gb|EGC53462.1| peptide chain release factor 1 [Neisseria meningitidis OX99.30304]
 gi|325136665|gb|EGC59265.1| peptide chain release factor 1 [Neisseria meningitidis M0579]
 gi|325201657|gb|ADY97111.1| peptide chain release factor 1 [Neisseria meningitidis M01-240149]
 gi|325208608|gb|ADZ04060.1| peptide chain release factor 1 [Neisseria meningitidis NZ-05/33]
          Length = 358

 Score =  239 bits (609), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 120/349 (34%), Positives = 175/349 (50%), Gaps = 8/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +       RL  +      P    ++   + L RE   L   +   +  +    D  
Sbjct: 4   SILEKLQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAELTPVVEVFQNYRLAQSDLA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E+  + +      E  +  +          Q   L     D  + ++E+ AG GG E
Sbjct: 64  DAEEMLSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEIRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR
Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G
Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V+DGDL +   A +A  +
Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITNALIAEHQ 349


>gi|254456112|ref|ZP_05069541.1| peptide chain release factor 2 [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207083114|gb|EDZ60540.1| peptide chain release factor 2 [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 326

 Score =  239 bits (609), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 175/322 (54%), Positives = 243/322 (75%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             + + WQ+   +K +++E++  ++ ++  K   ++L D   + ELA EE++ ++ +E  
Sbjct: 1   MLEANFWQDKNNSKNIIKEKKLYEDLLNIHKASIEKLIDLNDISELAAEEENQAVQKEIL 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            N++ ++  V+  + +  LS E DS D Y+E+HAGAGGTESQDWA ML RMY +WA+++ 
Sbjct: 61  QNIKDLRDLVKTNEIKCFLSNETDSLDCYIEIHAGAGGTESQDWAEMLRRMYLKWADQKN 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK+  +  H G+EAGIKS+T+ I+G   +GWLK E G+HRLVRISP+DS +RRHTSF+SI
Sbjct: 121 FKSNLISEHKGDEAGIKSSTIKIEGDYVFGWLKKESGIHRLVRISPFDSGARRHTSFASI 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
           WVYPVVD++I IEI E D RIDTYR+SGAGGQHVNTTDSAVRITHIP+ +VVQCQ ERSQ
Sbjct: 181 WVYPVVDENINIEIIEKDLRIDTYRSSGAGGQHVNTTDSAVRITHIPSKIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           HKNK    NML+A+LY+ E++K+E+     E+SK+EIGWG QIRSYVLQPY++VKD RTN
Sbjct: 241 HKNKETCINMLKARLYDYEIKKKEQKNQNTENSKSEIGWGHQIRSYVLQPYRLVKDNRTN 300

Query: 330 IEKTSPSDVLDGDLDDFMKATL 351
            E T+P  +LDG++D F++ +L
Sbjct: 301 FESTNPDKILDGEIDGFLEQSL 322


>gi|239907764|ref|YP_002954505.1| peptide chain release factor 1 [Desulfovibrio magneticus RS-1]
 gi|259585220|sp|C4XIQ1|RF1_DESMR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|239797630|dbj|BAH76619.1| peptide chain release factor 1 [Desulfovibrio magneticus RS-1]
          Length = 357

 Score =  239 bits (609), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 110/346 (31%), Positives = 173/346 (50%), Gaps = 11/346 (3%)

Query: 13  LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68
           +F   ++  ++   L  +   P +  +    + L +    L + ++  +E +     L D
Sbjct: 1   MFAKLESLERKYEDLERQLSAPDVVSDQERFRKLSKTHSDLSDVVAAFREYKKIAQDLED 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           N  + +    E       ET    +         +   L     D  +  LE+ AG GG 
Sbjct: 61  NQEMAQDPDPEIRELAQAETKALKEAQVELEARLKVLLLPKDPMDEKNILLEIRAGTGGD 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMYTR+AE +++K E +   +    G K     I G   Y  LK E G H
Sbjct: 121 EAALFAGDLFRMYTRYAETKRWKVEIMSQSETGSGGFKEVIASISGDKVYSRLKYESGAH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ + P   + +++ I  ++ RID YR+SG GGQ VNTTDS
Sbjct: 181 RVQRVPATESQGRIHTSAVTVAIMP-EAEEVDVAIDPNELRIDVYRSSGPGGQSVNTTDS 239

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+THIP+G+VV CQ E+SQHKNKA+A  +LR++L ++E  K+          ++++G 
Sbjct: 240 AVRVTHIPSGLVVICQDEKSQHKNKAKALKVLRSRLLQVEQDKQRAEQEAA--RRSQVGT 297

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G    +IR+Y   P   V D R N+       VL+GDLD+   A +
Sbjct: 298 GDRSERIRTYNF-PQGRVTDHRINLTLYRLDAVLEGDLDELCGALI 342


>gi|187931103|ref|YP_001891087.1| peptide chain release factor 1 [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|238691540|sp|B2SFF6|RF1_FRATM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|187712012|gb|ACD30309.1| peptide chain release factor 1 [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 361

 Score =  239 bits (609), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 186/346 (53%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   ++    +  +  +  + + L +E  HL+  +   KE    L D     E+
Sbjct: 9   LQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALEDKQAAYEM 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D   +     +     + I+      Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LNEKDAELVEMAKEELKLANEAIEKLESELQIFLLPRDPNDDANVFLEIRAGTGGDEASI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L +MY+++AE+R +K E +   +GE  G K     I G   Y  LK E G HR+ R
Sbjct: 129 FSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   I+I+ +D ++DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++     ++ K+ +G G   
Sbjct: 249 THIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQ--SDTRKSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+      +V++G LD  ++  +   +
Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLILEHQ 351


>gi|325109320|ref|YP_004270388.1| bacterial peptide chain release factor 2 (bRF-2) [Planctomyces
           brasiliensis DSM 5305]
 gi|324969588|gb|ADY60366.1| bacterial peptide chain release factor 2 (bRF-2) [Planctomyces
           brasiliensis DSM 5305]
          Length = 373

 Score =  239 bits (609), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 160/353 (45%), Positives = 229/353 (64%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L +++  L    D+D   +++  +N +   P  W N  +A+  M E + L + ++ ++E+
Sbjct: 12  LMKRILYLKDSLDYDVKCEQVKEINDRMAQPGFWDNQEKAQETMAELRRLKSLVTPLEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
                D  +LLE A  +D    +QE +    R+   V+  +F+ LL    D+ +AY+ + 
Sbjct: 72  VQGRDDLEVLLEFAEADDSEETVQEITSTCDRLGSIVDKVEFQLLLGQPEDALNAYVTIQ 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AG GGT++ DWA MLLRMY RWAEK +  TE LE  D EEAGI+ ATLLIKG  A+G+LK
Sbjct: 132 AGEGGTDAADWAEMLLRMYIRWAEKEEMATELLERTDAEEAGIRHATLLIKGDYAFGYLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE-SDCRIDTYRASGAGGQ 241
           GE G HRLVR+SP++S  +R T+F+++ V P VDDS EI+I   +D   DT RA GAGGQ
Sbjct: 192 GESGNHRLVRMSPFNSAGKRQTAFAAVDVTPEVDDSFEIDIDWDNDVDEDTMRAGGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVR+TH  +G+VV+CQ ERSQH+N+A A  ML AKLY++E++KRE        
Sbjct: 252 HVNKTESAVRLTHKESGLVVRCQNERSQHQNRASARKMLTAKLYQMEIEKRESENAARRG 311

Query: 302 SKTEIGW-GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            K++IG+ G  IR+YVLQP Q VKD R+ ++  +P  VL+G+LD F++A L  
Sbjct: 312 EKSKIGFGGETIRNYVLQPEQFVKDTRSELKTANPLTVLEGELDPFLEAYLKW 364


>gi|328543671|ref|YP_004303780.1| peptide chain release factor 2 [polymorphum gilvum SL003B-26A1]
 gi|326413415|gb|ADZ70478.1| Peptide chain release factor 2 [Polymorphum gilvum SL003B-26A1]
          Length = 323

 Score =  239 bits (609), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 224/309 (72%), Positives = 257/309 (83%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD  I+ ++ ++  L DN+ L+EL   E D S++ E  + L+ +K EV   Q  
Sbjct: 1   MRERQQLDEGITGVRRLESELSDNIELIELGDLEGDKSVVNEAEEALRGLKDEVLKLQMA 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD ND YLE++AGAGGTESQDWA+MLLRMY RWAEKR +K E LE+HDGEEAGI
Sbjct: 61  SLLSGEADGNDTYLEINAGAGGTESQDWASMLLRMYRRWAEKRGYKVELLEVHDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLLIKG NAYGWLK E GVHRLVRISPYDS +RRHTSF+S WVYPVVDDSIEI+I+E
Sbjct: 121 KSATLLIKGENAYGWLKTESGVHRLVRISPYDSQARRHTSFASAWVYPVVDDSIEIDINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG+VVQCQ ERSQHKN+A AW ML+A++Y
Sbjct: 181 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGIVVQCQSERSQHKNRATAWAMLKARMY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E ELQKREE A+   +SKT IGWG QIRSYVLQPYQMVKDLRT +E +SP DVL+GDLD 
Sbjct: 241 EAELQKREEAASAEAASKTSIGWGHQIRSYVLQPYQMVKDLRTGVESSSPDDVLNGDLDP 300

Query: 346 FMKATLAIK 354
           FM+A LA +
Sbjct: 301 FMEAALAQR 309


>gi|241760302|ref|ZP_04758397.1| peptide chain release factor 1 [Neisseria flavescens SK114]
 gi|241319180|gb|EER55658.1| peptide chain release factor 1 [Neisseria flavescens SK114]
          Length = 358

 Score =  239 bits (609), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 173/344 (50%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +      P    ++   + L RE   +   +    +      D     E+
Sbjct: 9   LQQLSDRLEEVTHLLGQPEATSDMDNYRKLTREHAEITPVVETFHQYMQAQNDMAEAQEM 68

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +      E  +  +          Q   L     D  + ++EV AG GG E+  +A
Sbjct: 69  LSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATENQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G    +
Sbjct: 249 LPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       V+DGDL++   A +A  +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQ 349


>gi|238927406|ref|ZP_04659166.1| peptide chain release factor RF1 [Selenomonas flueggei ATCC 43531]
 gi|238884688|gb|EEQ48326.1| peptide chain release factor RF1 [Selenomonas flueggei ATCC 43531]
          Length = 354

 Score =  239 bits (609), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 173/346 (50%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL---CDNLIL 72
                 +   L T   DP +  ++   +   RE   L   +   +  +  L    ++  +
Sbjct: 5   LAAVADKYRELETLLSDPSVMADMEAWQRYTREHAALTPIVEAYQAYRRALAIIDEDKEM 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L  A  E    + +E +                 L     D  +  +E+  G GG E+  
Sbjct: 65  LSEADAEMKAMLTEEIAAAEAERDRLAAELPILLLPRDPNDEKNVIVEIRGGVGGEEAAL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY R+AE++ ++TE L  +  E  G K  T L+ G  AY  LK E G HR+ R
Sbjct: 125 FAASLFRMYVRYAERQGWRTEVLSSNPTEIGGFKEITFLVSGTAAYSKLKYESGTHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           I   +S  R HTS  ++ V P   + +E+ I  +D RIDTY ASGAGGQ+VN T++A+RI
Sbjct: 185 IPVTESGGRIHTSAVTVAVLP-EAEEVEVTIDPNDLRIDTYCASGAGGQYVNRTETAIRI 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VVQCQ E+SQ KN+ +A  +LRA+LY+    ++E+   +    ++++G G   
Sbjct: 244 THIPTGIVVQCQDEKSQLKNREKAMKVLRARLYD--RAQQEQADAVAADRRSQVGSGDRS 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       V+DG+LD+ +   +   +
Sbjct: 302 ERIRTYNF-PQGRVTDHRIGLTLYKIDAVMDGELDELLAGLITADQ 346


>gi|170723617|ref|YP_001751305.1| peptide chain release factor 1 [Pseudomonas putida W619]
 gi|229470352|sp|B1JEP6|RF1_PSEPW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169761620|gb|ACA74936.1| peptide chain release factor 1 [Pseudomonas putida W619]
          Length = 360

 Score =  239 bits (609), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 121/346 (34%), Positives = 176/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  I   KE +    D      L
Sbjct: 9   LDTLQDRFEELTALLGDAEVISDQARFRAYSREYSEVEPVIGAYKEWRKVQDDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE---VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +  +  +         Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LKDADPDMREMAVEEVREAKEQLVGLESQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAERRGWRLEILSENEGEHGGYKEIIARVEGDSVYGKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+ + IEI+ +D R+DTYRASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQVAIEINPADLRVDTYRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ+ERSQHKN+A+A + L AKL +  +Q       I    K  +G G   
Sbjct: 249 THLPTGIVVECQEERSQHKNRARAMSWLSAKLND--MQTSAAQNAIASERKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+   S  D+L G +D  ++  LA  +
Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYSLDDILAGGVDAVIEPLLAEYQ 351


>gi|296436914|gb|ADH19084.1| peptide chain release factor 2 [Chlamydia trachomatis G/11222]
          Length = 334

 Score =  239 bits (609), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 155/326 (47%), Positives = 206/326 (63%), Gaps = 1/326 (0%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             +      W +V+ A  +      L   +S   E+++++      LE      D  + +
Sbjct: 2   EQQAVQDGFWDDVVRAGKISERIARLKQQLSEFNELKNKVSAIQFFLEDEESSKDLEMQK 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E        + ++   +   LLSGE D N  +L ++AGAGGTES DW  MLLRMY RWA 
Sbjct: 62  ELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRWAS 121

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
              ++ E ++  DGE AGIK  TL + G  AYG+ K E GVHRLVRISP+DSN++RHTSF
Sbjct: 122 SHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSF 181

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S+ V+P +D+ IE+EI   D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ E
Sbjct: 182 ASVEVFPEIDNKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNE 241

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQ +N+    NMLRA++Y+  LQ+R E  NI   +K EI WG QIR+YV QPY +VKD+
Sbjct: 242 RSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDV 301

Query: 327 RTNIEKTSPSDVLDGD-LDDFMKATL 351
           RT  E  +   ++DG+ LD F+KA L
Sbjct: 302 RTGYEVGNIQAMMDGELLDAFIKAYL 327


>gi|317495961|ref|ZP_07954323.1| peptide chain release 2 [Gemella moribillum M424]
 gi|316913865|gb|EFV35349.1| peptide chain release 2 [Gemella moribillum M424]
          Length = 372

 Score =  239 bits (609), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 156/351 (44%), Positives = 219/351 (62%), Gaps = 1/351 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++++Q+         +   QR++ +     D   W +   A  L+ E + +   +     
Sbjct: 12  EVNKQITEFKTSLKIEEKEQRVAEIENMMLDADFWNDSETASTLVTESKSIKKELDEFSA 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + D L  +  ++E   +EDD  I QE  + ++ +K +VE   F  L + E D+N A LE+
Sbjct: 72  MLDYLNHSEEMIEFLNDEDDEEIYQELIETVRDLKQQVEDFSFRLLFAEEYDNNTAILEI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HAGAGGT++ DWA ++LRMY R+  K+      L    G+  G+KSATL I+G  AYG L
Sbjct: 132 HAGAGGTDATDWAEIMLRMYERFFSKQGLTYSYLNYQSGDITGVKSATLKIEGDFAYGLL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI-EIEISESDCRIDTYRASGAGG 240
           KGE+GVHR+VRISP+D + +RHTSF+SI V P   D    IEI+  D +IDTYRA GAGG
Sbjct: 192 KGEKGVHRVVRISPFDPSGKRHTSFASIDVIPEFSDEEANIEINIEDLKIDTYRAQGAGG 251

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QH+NTTDSAVRITH+PTG+VVQ Q ERSQ KN+  A   L++KL++LEL+++E       
Sbjct: 252 QHINTTDSAVRITHLPTGIVVQSQAERSQIKNRDFAMKNLKSKLHQLELEEKERELASIR 311

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             + +IGWG QIRSYV  PY MVKD RTN E ++   V+DG++ DF+ A L
Sbjct: 312 GEQKDIGWGSQIRSYVFTPYTMVKDHRTNYEVSTVDKVMDGEIIDFIDAYL 362


>gi|255987637|ref|YP_001884728.2| peptide chain release factor 2 [Clostridium botulinum B str. Eklund
           17B]
 gi|255961470|gb|ACD21926.2| peptide chain release factor 2 [Clostridium botulinum B str. Eklund
           17B]
          Length = 325

 Score =  238 bits (608), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 153/326 (46%), Positives = 220/326 (67%), Gaps = 1/326 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++   W +   A+ + +E + + + I  ++ ++ +L D  +L E+  ++D+ S  +   
Sbjct: 1   MQEDGFWNDTKRAEEITKESKRIKDKIQRVESVRSKLDDIEVLKEIMDDDDEESAYE-II 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +N++ I+ E++    E LLSGE D N+A L +H G GGT++ DW  MLLRMYTRW EK+ 
Sbjct: 60  NNIKEIEEEIDNYNMEILLSGEYDKNNAILTLHVGVGGTDANDWTEMLLRMYTRWCEKKN 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K E +++ +G+EAGIKS TL + G  AYG+LK E+G+HRLVRISP+++N +R TSF+S+
Sbjct: 120 YKVEMIDLLEGDEAGIKSVTLKVIGEYAYGYLKAEKGIHRLVRISPFNANGKRQTSFASM 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +    +I+I   D +IDTYRASGAGGQH+N TDSAVRITH+PTGVVVQCQ ERSQ
Sbjct: 180 EVLPELTKEQDIDIRSEDIKIDTYRASGAGGQHINKTDSAVRITHLPTGVVVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             NK  A  ML+AKL EL+ +  +E          ++GWG QIRSYV  PY +VKD RTN
Sbjct: 240 FSNKDTAMGMLKAKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTN 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355
           +E ++ + V+DGDLD F+ + L   K
Sbjct: 300 VEVSNVTAVMDGDLDLFVNSYLKSLK 325


>gi|294669176|ref|ZP_06734256.1| peptide chain release factor 1 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308808|gb|EFE50051.1| peptide chain release factor 1 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 358

 Score =  238 bits (608), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 118/345 (34%), Positives = 175/345 (50%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +      P    ++   + L RE   +   +    +      D     E+
Sbjct: 9   LQQLSDRLEEVTALLGSPEATSDMGNYRKLTREHAEITPVVETFHQYMQAQNDMAEAQEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGTESQDW 133
             + +             + K++    + + L       D  + ++EV AG GG E+  +
Sbjct: 69  LSDPE-MKDFATEEIEAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAALF 127

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR+ R+
Sbjct: 128 AGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSAVRIT
Sbjct: 188 PATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G    
Sbjct: 248 HLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R N+       V+DGD+++   A +A  +
Sbjct: 306 RIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDMEEITNALIAEHQ 349


>gi|218133361|ref|ZP_03462165.1| hypothetical protein BACPEC_01226 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992234|gb|EEC58238.1| hypothetical protein BACPEC_01226 [Bacteroides pectinophilus ATCC
           43243]
          Length = 363

 Score =  238 bits (608), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 118/362 (32%), Positives = 190/362 (52%), Gaps = 16/362 (4%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           M++S  +   G     ++ V R   +  +  +P +  +    + LM+E+  +   ++   
Sbjct: 1   MEIS--MEIFGR---LEDLVHRYEDITLELSNPDVVNDQKRFRDLMKEQNDITPIVNAYN 55

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSND 116
           E +    +    L +  EE+D  + +   + L   K   E  +       L     D  D
Sbjct: 56  EYKSCKQNIEDSLTMLDEENDEELKELAKEELNDSKKRAEELENELKILLLPKDPNDDKD 115

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             +E+ AGAGG E+  +A  L RMYT +AE R++K E +   +    G+K    ++KG  
Sbjct: 116 IIVEIRAGAGGDEAALFAAELFRMYTHYAESRRWKVEVVNSDETGIGGMKEIEFMVKGQG 175

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           AY  LK E GVHR+ R+   +S  R HTS +++ V P   + ++++I E D RID  RAS
Sbjct: 176 AYSVLKYESGVHRVQRVPETESGGRIHTSTATVAVMP-EAEEVDVQIDEKDIRIDVMRAS 234

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ VNTTDSAVR+TH PTG+V+  Q E+SQ +NK +A+ +LRAKLY++E QK     
Sbjct: 235 GNGGQCVNTTDSAVRLTHYPTGIVIYSQTEKSQIQNKEKAFALLRAKLYDMECQK--AHD 292

Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
              ++ +++IG G    +IR+Y   P   V D R  +       ++DGD+ + + A +A 
Sbjct: 293 AEADARRSQIGTGDRSEKIRTYNF-PQGRVTDHRIGLTLYKLDKIMDGDIQEIIDACIAA 351

Query: 354 KK 355
            +
Sbjct: 352 DQ 353


>gi|50954999|ref|YP_062287.1| peptide chain release factor 2 [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|50951481|gb|AAT89182.1| peptide chain release factor 2 [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 372

 Score =  238 bits (608), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 138/353 (39%), Positives = 210/353 (59%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L   L  +  + D D     ++ L+ +   P LW + + A+ +     H  + ++ I  
Sbjct: 12  ELRSTLADITAVVDVDKLRAAIADLSERAGAPDLWDDPVNAQKVTSALSHRQSELARITA 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           IQ RL D  +L+ELA E DD     E    L+ ++  +   + ++LLSGE D   A + +
Sbjct: 72  IQQRLDDLEVLVELANEGDDEESAAEARAELEALQKALGDLEVQTLLSGEYDERAAIVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY RWAE+ K+    ++    E AGIKSAT  +  P A+G L
Sbjct: 132 RSGAGGDDATDFAEMLLRMYLRWAEQHKYPVTVMDTSYAEGAGIKSATFEVDMPYAFGTL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRL RISP+ S  +R TSF+++ V P+++++ ++++ E D R+D +R+SG GGQ
Sbjct: 192 SVEAGTHRLARISPFGSADKRQTSFAAVEVIPLMEEANQVDVPEGDIRVDVFRSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+TH+PTG+VV  Q E+SQ +N+A A  +L+ +L  L+ ++          
Sbjct: 252 SVNTTDSAVRLTHLPTGIVVSMQNEKSQIQNRAAAMRVLQTRLLLLQKEEEAAKKKELAG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + T   WG Q+RSY L   Q+VKDLRT  E  +P+ V DGDLD F+ A +  +
Sbjct: 312 NIT-ASWGDQMRSYFLYGQQLVKDLRTGYESGNPATVFDGDLDGFIAAGIRWR 363


>gi|61252075|sp|P43917|RF1_HAEIN RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 360

 Score =  238 bits (608), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 181/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     D  +  +  + +   +E   L+  +           +      L
Sbjct: 9   LESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQNIEEAEIL 68

Query: 76  ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q   +  +  I+   +  Q   L     D  + YLE+ AG GG E+  +A
Sbjct: 69  LDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVTGEGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++       +  +  +G G +   
Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQ--TDMRRNLLGSGDRSDK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      +V++G +D+ ++  +   +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQPIITEYQ 349


>gi|113461093|ref|YP_719161.1| peptide chain release factor 1 [Haemophilus somnus 129PT]
 gi|119361547|sp|Q0I3B5|RF1_HAES1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|112823136|gb|ABI25225.1| bacterial peptide chain release factor 1 (bRF-1) [Haemophilus
           somnus 129PT]
          Length = 360

 Score =  238 bits (608), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 112/344 (32%), Positives = 185/344 (53%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     +P +  +  + +   +E   L++ +           +      L
Sbjct: 9   LESLKERHEELEALLGEPSVINDQDKFRAYSKEYAQLEDVVKCFARWNWLNNNIEETQLL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +   +  +      E + Q   L     D  +AYLE+ AG GG E+  +A
Sbjct: 69  LDDPDMKEMAELEIEESKAEIENAEQQLQILLLPKDPNDEYNAYLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESKRWRVEVLNANESEQGGYKEIIVKVNGEGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   EI+ SD RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPENEMPEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++ +     ++ +  +G G +   
Sbjct: 249 IPTGIVVECQDERSQHKNKAKALSVLASRIAQAEQERQAQAQ--ADTRRNLLGSGDRSDK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      +V++G +D+ ++  +   +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 349


>gi|326511439|dbj|BAJ87733.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 517

 Score =  238 bits (608), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 133/358 (37%), Positives = 213/358 (59%), Gaps = 4/358 (1%)

Query: 1   MKLS-RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
           ++L+  ++N +      +  ++ ++ L  K+ D  LW +  +A+ L+     L   +  +
Sbjct: 149 VELAVERVNEVRQDAGLEQLLEEIASLENKSGDSTLWDDPSKAQELLVALTELKEKVKLL 208

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSGEADSNDA 117
            + + ++ +   +++L  E D          +         ++  +   LLSG  D + A
Sbjct: 209 NDFKSQVEEADTIVQLTEELDSIDTGLLEEASKIIKALNKALDNFEMTRLLSGPYDKDGA 268

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            + + AGAGGT++QDWA+MLLRMY RW EK+++K+  +E   GEEAGIKSAT+ ++G  A
Sbjct: 269 VITISAGAGGTDAQDWADMLLRMYVRWGEKQRYKSRVVEKSPGEEAGIKSATVELEGRYA 328

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRAS 236
           YG+L GE+G HR+VR SP+++   R TSF+ + V P+  ++S+++EI E D  I   RA 
Sbjct: 329 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESLDVEIPEEDLDISFTRAG 388

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ+VN  ++AVR+ HIPTG+ V+C +ERSQ  NK +A   L+AKL  +  ++R    
Sbjct: 389 GKGGQNVNKVETAVRMVHIPTGIAVRCAEERSQLANKIKALRRLKAKLLVIAEEQRASEI 448

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                   +  WG+QIR+YV  PY++VKD+RT  E +  S V+DG+LD F+KA L  K
Sbjct: 449 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTACETSDISGVMDGELDPFIKAYLQYK 506


>gi|255311271|ref|ZP_05353841.1| peptide chain release factor 2 [Chlamydia trachomatis 6276]
 gi|255317573|ref|ZP_05358819.1| peptide chain release factor 2 [Chlamydia trachomatis 6276s]
 gi|297748590|gb|ADI51136.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Chlamydia
           trachomatis D-EC]
 gi|297749470|gb|ADI52148.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Chlamydia
           trachomatis D-LC]
          Length = 334

 Score =  238 bits (608), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 156/326 (47%), Positives = 206/326 (63%), Gaps = 1/326 (0%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             +      W +V+ A  +      L   +S   E+++++      LE      D  + +
Sbjct: 2   EQQAVQDGFWDDVVRAGKISERIARLKQQLSEFNELKNKVSAIQFFLEDEESSKDLEMQK 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E        + ++   +   LLSGE D N  +L ++AGAGGTES DW  MLLRMY RWA 
Sbjct: 62  ELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRWAS 121

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
              ++ E ++  DGE AGIK  TL + G  AYG+ K E GVHRLVRISP+DSN++RHTSF
Sbjct: 122 SHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSF 181

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S+ V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ E
Sbjct: 182 ASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNE 241

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQ +N+    NMLRA++Y+  LQ+R E  NI   +K EI WG QIR+YV QPY +VKD+
Sbjct: 242 RSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDV 301

Query: 327 RTNIEKTSPSDVLDGD-LDDFMKATL 351
           RT  E  +   ++DG+ LD F+KA L
Sbjct: 302 RTGYEVGNIQAMMDGELLDAFIKAYL 327


>gi|260102492|ref|ZP_05752729.1| peptide chain release factor RF2 [Lactobacillus helveticus DSM
           20075]
 gi|260083697|gb|EEW67817.1| peptide chain release factor RF2 [Lactobacillus helveticus DSM
           20075]
          Length = 332

 Score =  238 bits (608), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 150/324 (46%), Positives = 199/324 (61%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
                 W +   A+ L+ +   L        ++Q    D L  LEL   E D  + QE  
Sbjct: 1   MMQTGFWDDQEGAQKLISDNNLLKEKRDSFLKLQQDYEDELTALELLRAEPDADLQQEVE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L+ ++      + + LLSG+ DS++A LE+H GAGGTE+ DW  ML RMY R+ +   
Sbjct: 61  TDLKDLQEAFHNYELDLLLSGKYDSHNALLEIHPGAGGTEAMDWGQMLFRMYQRYCDAAG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E  +   GEEAG+KS ++ I G NAYG LK E GVHRLV ISP+D+  RRHTSF+S+
Sbjct: 121 FKFEINDYEPGEEAGLKSVSVRISGNNAYGMLKSENGVHRLVIISPFDAAKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDSI+I+I   D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ
Sbjct: 181 EVIPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A N LRAKL+ LE +K+ +     +  + EIGWG QIRSYV  PY +VKDLRT 
Sbjct: 241 LQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E    + V+DG L  F+ + L  
Sbjct: 301 YETADVNGVMDGKLQPFIYSYLQW 324


>gi|304386835|ref|ZP_07369099.1| peptide chain release factor RF1 [Neisseria meningitidis ATCC
           13091]
 gi|304339089|gb|EFM05179.1| peptide chain release factor RF1 [Neisseria meningitidis ATCC
           13091]
          Length = 358

 Score =  238 bits (608), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 120/349 (34%), Positives = 175/349 (50%), Gaps = 8/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +       RL  +      P    ++   + L RE   L   +   +  +    D  
Sbjct: 4   SILEKLQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAELTPVVEVFQNYRLAQSDLA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E+  + +      E  +  +          Q   L     D  + ++E+ AG GG E
Sbjct: 64  DAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR
Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G
Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V+DGDL +   A +A  +
Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITNALIAEHQ 349


>gi|307941920|ref|ZP_07657273.1| peptide chain release factor 2 [Roseibium sp. TrichSKD4]
 gi|307774826|gb|EFO34034.1| peptide chain release factor 2 [Roseibium sp. TrichSKD4]
          Length = 322

 Score =  238 bits (608), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 223/309 (72%), Positives = 259/309 (83%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD+ I+ +K ++  L DN+ L+EL   E D S++++  D L+ +K +V   Q +
Sbjct: 1   MRERQQLDDGINGVKGLEQDLADNMELIELGELEGDQSVIKDAEDALRGLKDKVNELQLQ 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD ND YLE+++GAGGTESQDWA+MLLRMY RWAEKR FK E LE HDGEEAGI
Sbjct: 61  SLLSGEADGNDTYLEINSGAGGTESQDWASMLLRMYRRWAEKRGFKVELLEYHDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLLIKG NAYGW+K E GVHRLVRISPYDSN+RRHTSFSS WVYPV+DDSIEIE++E
Sbjct: 121 KSATLLIKGENAYGWMKTESGVHRLVRISPYDSNARRHTSFSSAWVYPVIDDSIEIEVNE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYRASGAGGQHVNTTDSAVRITH PTG+VVQCQ ERSQHKN+A AW+ML+A+LY
Sbjct: 181 SDCRIDTYRASGAGGQHVNTTDSAVRITHQPTGIVVQCQSERSQHKNRATAWSMLKARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE AN   + KT+IGWG QIRSYVLQPYQ+VKDLRT +E TSP DVLDG LD 
Sbjct: 241 EQELKKREEAANAEAAGKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTSPGDVLDGALDP 300

Query: 346 FMKATLAIK 354
           FM+A LA +
Sbjct: 301 FMEAALAQR 309


>gi|291442144|ref|ZP_06581534.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
 gi|291345039|gb|EFE71995.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
          Length = 375

 Score =  238 bits (608), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 141/354 (39%), Positives = 206/354 (58%), Gaps = 6/354 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  +  +  + D D     ++ L  +   P LW N  EA+ +     HL   +   + +
Sbjct: 13  LSSTMESIEAVLDLDRMRADIAVLEEQAAAPSLWDNPDEAQKITSRLSHLQAEVRKAEAL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +L E+A EEDD     E    L  ++  ++  +  +LLSGE D+ +A + + 
Sbjct: 73  RGRIDDLAVLFEMAEEEDDPDTRAEAEAELADVRKALDEMEVRTLLSGEYDAREALVNIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           A AGG ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L 
Sbjct: 133 AEAGGVDAADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+ S  ++I ESD R+D YR+SG    +
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEQSDHVDIDESDLRVDVYRSSGPSC-N 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
              +D  VRITH+PTG++     ERS+ +NK  A N+L+A+L     ++R+E     ++ 
Sbjct: 252 PRDSDFMVRITHLPTGIMASSDSERSRTRNKVTAMNVLKARLLG---RRRQEEQAKMDAL 308

Query: 303 KTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K E G   G Q+RSY L PYQMVKDLRT  E  +P  V +G++D F++A +  +
Sbjct: 309 KDEGGNPCGNQVRSYELHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWR 362


>gi|167761288|ref|ZP_02433415.1| hypothetical protein CLOSCI_03693 [Clostridium scindens ATCC 35704]
 gi|167660954|gb|EDS05084.1| hypothetical protein CLOSCI_03693 [Clostridium scindens ATCC 35704]
          Length = 312

 Score =  238 bits (608), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 153/308 (49%), Positives = 216/308 (70%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+E +HL   +  I+ +     D  +L+E+  E++D S+ +E  + ++  +   E  + +
Sbjct: 1   MKELKHLKELVETIQNLYASYDDINLLIEMGYEDEDPSMAREIEEEIRGFETSYEELRIQ 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGE D+ +A + +HAGAGGTES DWA+ML RMY+RWAE++ F  + L+  DG+ AGI
Sbjct: 61  TLLSGEYDACNAIVTIHAGAGGTESCDWASMLYRMYSRWAERKGFTIQVLDYLDGDIAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T  + G NAYG+LK E+GVHRLVRISP+++  +R TSF+S  V P ++D I+IEI++
Sbjct: 121 KTVTFEVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFASCDVVPDIEDEIDIEIAD 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D +IDTYRASGAGGQHVN T SA+RITH+PTG+VVQCQ ERSQH NK +A  ML+ KL 
Sbjct: 181 DDLKIDTYRASGAGGQHVNKTSSAIRITHLPTGIVVQCQNERSQHHNKEKAMQMLKVKLQ 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            ++ Q++ E  +       EIG+G QIRSYV+QPY MVKD RTN+E ++   V+DG +D 
Sbjct: 241 LMKEQEQAEKVSDIRGEVKEIGFGNQIRSYVMQPYTMVKDHRTNVENSNVGAVMDGSIDM 300

Query: 346 FMKATLAI 353
           F+ A L  
Sbjct: 301 FINAYLKQ 308


>gi|332184657|gb|AEE26911.1| Peptide chain release factor 1 [Francisella cf. novicida 3523]
          Length = 361

 Score =  238 bits (608), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 186/346 (53%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   ++    +  +  +  + + L +E  HL+  +   KE    L D     E+
Sbjct: 9   LQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALEDKQAAYEM 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D   +     +     + I+      Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LNEKDAELVEMAKEELKLANETIEKLESELQILLLPRDPNDDANVFLEIRAGTGGDEASI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L +MY+++AE+R +K E +   +GE  G K     I G   Y  LK E G HR+ R
Sbjct: 129 FSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   I+I+ +D ++DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++     ++ K+ +G G   
Sbjct: 249 THIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQ--SDTRKSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+      +V++G LD  ++  +   +
Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQ 351


>gi|30692908|ref|NP_851096.1| HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109); translation release
           factor/ translation release factor, codon specific
           [Arabidopsis thaliana]
 gi|8777302|dbj|BAA96892.1| translation releasing factor RF-2 [Arabidopsis thaliana]
 gi|15810391|gb|AAL07083.1| putative translation releasing factor RF-2 [Arabidopsis thaliana]
 gi|21436317|gb|AAM51328.1| putative translation releasing factor RF-2 [Arabidopsis thaliana]
 gi|21536944|gb|AAM61285.1| translation releasing factor RF-2 [Arabidopsis thaliana]
 gi|332006668|gb|AED94051.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana]
          Length = 456

 Score =  238 bits (608), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 139/358 (38%), Positives = 212/358 (59%), Gaps = 4/358 (1%)

Query: 1   MKLSR-QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
           ++++  ++  +    +     Q ++ L +K  D   W +  +A+  +     L + +  +
Sbjct: 88  VEIASARVEEIRASANLQQLEQEITNLESKATDTSFWDDRTKAQETLSSLNDLKDRMRLL 147

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSNDA 117
            E +  + D   +++L  E D   +           +    ++  +   LLSG  D   A
Sbjct: 148 SEFKTMVEDAETIVKLTEEMDSTDVSLLEEAMGIIKELNKSLDKFELTQLLSGPYDKEGA 207

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            + + AGAGGT++QDWA+MLLRMY RW EK+++KT+ +E+ +GEEAGIKSATL I+G  A
Sbjct: 208 VVYITAGAGGTDAQDWADMLLRMYMRWGEKQRYKTKVVEMSNGEEAGIKSATLEIEGRYA 267

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRAS 236
           YG++ GE+G HR+VR SP++S   R TSFS + V P+  ++++ IEI E D  I   RA 
Sbjct: 268 YGYISGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAG 327

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ+VN  ++AVRITHIPTGV V+C +ERSQ  NK +A   L+AKL  +  ++R    
Sbjct: 328 GKGGQNVNKVETAVRITHIPTGVAVRCTEERSQLANKTRALIRLKAKLMVIAEEQRATEI 387

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                   +  WG+QIR+YV  PY++VKD+RT  E +  + V+DGDLD F+KA L  K
Sbjct: 388 KEIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDITSVMDGDLDPFIKAYLKHK 445


>gi|238754561|ref|ZP_04615915.1| Peptide chain release factor 2 [Yersinia ruckeri ATCC 29473]
 gi|238707192|gb|EEP99555.1| Peptide chain release factor 2 [Yersinia ruckeri ATCC 29473]
          Length = 310

 Score =  238 bits (608), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 172/308 (55%), Positives = 218/308 (70%), Gaps = 1/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
            +ER  L+  ++ I E+   L D   LLELA+E DD     E    L+ +  ++   +F 
Sbjct: 2   GKERSSLEEIVTTIDELAQGLEDVSGLLELAIEADDEETFDEAVAELEILDGKLGQLEFR 61

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            + SGE DS + YL++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  DG+ AG+
Sbjct: 62  RMFSGEYDSANCYLDLQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGDVAGL 121

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ 
Sbjct: 122 KSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINP 181

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLY
Sbjct: 182 ADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLY 241

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E E+QK+     + E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD 
Sbjct: 242 EFEMQKKNADKQMLEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDK 300

Query: 346 FMKATLAI 353
           F++A+L  
Sbjct: 301 FIEASLKA 308


>gi|256372525|ref|YP_003110349.1| peptide chain release factor 2 [Acidimicrobium ferrooxidans DSM
           10331]
 gi|256009109|gb|ACU54676.1| peptide chain release factor 2 [Acidimicrobium ferrooxidans DSM
           10331]
          Length = 369

 Score =  238 bits (608), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 157/353 (44%), Positives = 226/353 (64%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +L         D+    L+ L     DP +W +  + + L R    L + +  I  +
Sbjct: 13  LAERLERARAFLHIDDRRTELAELEAALADPGVWSDPAKGRELSRRYGTLKDDVELIARL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D+ + +E+   +DD  +  E  D L  +   ++  +  SLL+GE D +DA LE+H
Sbjct: 73  DAMLADSNVAIEM--ADDDPDLAAEAEDVLTSLAAHLDAIEIRSLLAGEFDESDAVLEIH 130

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGT++QDWA M+LRMY RWA+ R F+ E  E+ +G+EAGI SAT +++G  AYG L 
Sbjct: 131 SGAGGTDAQDWAQMMLRMYERWAQGRGFEFEVDEVTEGQEAGILSATAIVRGRYAYGLLV 190

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+D+  RR TSF+S+ V P+ +D+ E+ I E D RIDTYR+SGAGGQH
Sbjct: 191 AERGVHRLVRISPFDAQHRRQTSFASLDVTPLAEDAGEVVIDEKDLRIDTYRSSGAGGQH 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVRITH+PTG+VV CQ ERSQ +N+A+A  +L +KL +   +++    +     
Sbjct: 251 VNVTDSAVRITHLPTGIVVSCQNERSQLQNRAKAMQILVSKLEQRRREEQRAQLDALSGP 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           + ++GW  Q+RSYVL PYQ+VKD R+  E  +   VLDG LD F++A LA ++
Sbjct: 311 RVDVGWANQVRSYVLAPYQLVKDHRSGYEDRNVQAVLDGRLDPFIEAFLAWRR 363


>gi|208779474|ref|ZP_03246819.1| peptide chain release factor 1 [Francisella novicida FTG]
 gi|208744435|gb|EDZ90734.1| peptide chain release factor 1 [Francisella novicida FTG]
          Length = 361

 Score =  238 bits (608), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 186/346 (53%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   ++    +  +  +  + + L +E  HL+  +   KE    L D     E+
Sbjct: 9   LQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALEDKQAAYEM 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D   +     +     + I+      Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LNEKDAELVEMAKEELKLANEAIEKLESELQILLLPRDPNDDANVFLEIRAGTGGDEASI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L +MY+++AE+R +K E +   +GE  G K     I G   Y  LK E G HR+ R
Sbjct: 129 FSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   I+I+ +D ++DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++     ++ K+ +G G   
Sbjct: 249 THIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQ--SDTRKSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+      +V++G LD  ++  +   +
Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQ 351


>gi|16273461|ref|NP_439710.1| peptide chain release factor 1 [Haemophilus influenzae Rd KW20]
 gi|145631803|ref|ZP_01787563.1| peptide chain release factor 1 [Haemophilus influenzae R3021]
 gi|145637543|ref|ZP_01793200.1| peptide chain release factor 1 [Haemophilus influenzae PittHH]
 gi|145642039|ref|ZP_01797610.1| peptide chain release factor 1 [Haemophilus influenzae R3021]
 gi|148826083|ref|YP_001290836.1| peptide chain release factor 1 [Haemophilus influenzae PittEE]
 gi|229844233|ref|ZP_04464374.1| peptide chain release factor 1 [Haemophilus influenzae 6P18H1]
 gi|229847123|ref|ZP_04467228.1| peptide chain release factor 1 [Haemophilus influenzae 7P49H1]
 gi|260580342|ref|ZP_05848171.1| peptide chain release factor 1 [Haemophilus influenzae RdAW]
 gi|260583304|ref|ZP_05851079.1| peptide chain release factor 1 [Haemophilus influenzae NT127]
 gi|319897179|ref|YP_004135374.1| peptide chain release factor rf-1 [Haemophilus influenzae F3031]
 gi|1574404|gb|AAC23209.1| peptide chain release factor 1 (prfA) [Haemophilus influenzae Rd
           KW20]
 gi|144982593|gb|EDJ90143.1| peptide chain release factor 1 [Haemophilus influenzae R3021]
 gi|145269229|gb|EDK09175.1| peptide chain release factor 1 [Haemophilus influenzae PittHH]
 gi|145273219|gb|EDK13094.1| peptide chain release factor 1 [Haemophilus influenzae 22.4-21]
 gi|148716243|gb|ABQ98453.1| peptide chain release factor 1 [Haemophilus influenzae PittEE]
 gi|229809952|gb|EEP45673.1| peptide chain release factor 1 [Haemophilus influenzae 7P49H1]
 gi|229813227|gb|EEP48915.1| peptide chain release factor 1 [Haemophilus influenzae 6P18H1]
 gi|260093019|gb|EEW76953.1| peptide chain release factor 1 [Haemophilus influenzae RdAW]
 gi|260093664|gb|EEW77577.1| peptide chain release factor 1 [Haemophilus influenzae NT127]
 gi|301170298|emb|CBW29904.1| peptide chain release factor RF-1 [Haemophilus influenzae 10810]
 gi|317432683|emb|CBY81046.1| peptide chain release factor RF-1 [Haemophilus influenzae F3031]
          Length = 361

 Score =  238 bits (608), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 181/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     D  +  +  + +   +E   L+  +           +      L
Sbjct: 10  LESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQNIEEAEIL 69

Query: 76  ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q   +  +  I+   +  Q   L     D  + YLE+ AG GG E+  +A
Sbjct: 70  LDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 129

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG LK E G HR+ R+ 
Sbjct: 130 GDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVTGEGVYGQLKFESGGHRVQRVP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 190 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 249

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++       +  +  +G G +   
Sbjct: 250 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQ--TDMRRNLLGSGDRSDK 307

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      +V++G +D+ ++  +   +
Sbjct: 308 IRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQPIITEYQ 350


>gi|90022891|ref|YP_528718.1| peptide chain release factor 1 [Saccharophagus degradans 2-40]
 gi|119361599|sp|Q21FM3|RF1_SACD2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|89952491|gb|ABD82506.1| bacterial peptide chain release factor 1 (bRF-1) [Saccharophagus
           degradans 2-40]
          Length = 360

 Score =  238 bits (607), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 176/346 (50%), Gaps = 10/346 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +  ++  +R + +     DP +  N  + + L RE   L+  I    E    L +  
Sbjct: 4   SILEKLEHLAERFTEVGALMGDPDVISNQDKFRDLGREYAELEPVIKCYNEYNTVLGNIA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN---DAYLEVHAGAGG 127
               L  + D         +  +        +     L    D N   + +LE+ AG GG
Sbjct: 64  EAKVLISDSDPDMRAMGQDELKENEAALEPLELELQKLLLPKDPNDGKNVFLEIRAGTGG 123

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  ++  L RMY+R+AE + +K E +  + GE  G K     + G   Y  LK E G 
Sbjct: 124 DEAAIFSGDLFRMYSRYAESKGWKVEIISENQGEHGGYKEIITRVVGQGVYSELKFESGA 183

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P  D+  E+ I+++D RIDT+RASGAGGQHVN TD
Sbjct: 184 HRVQRVPETESQGRIHTSACTVAVMPEADEMAEVNINKADLRIDTFRASGAGGQHVNKTD 243

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SA+R+THIPTGVVV+CQ ERSQHKN+A+A ++L ++L   + +K    A    + K+ +G
Sbjct: 244 SAIRLTHIPTGVVVECQDERSQHKNRAKAMSLLASRLSMAQEEK--AAAEQASARKSLVG 301

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            G    +IR+Y   P   V D R N+      +V+ G L D ++  
Sbjct: 302 SGDRSERIRTYNF-PQGRVTDHRINLTLYKLDEVMQGALGDVIQPL 346


>gi|332285704|ref|YP_004417615.1| peptide chain release factor 1 [Pusillimonas sp. T7-7]
 gi|330429657|gb|AEC20991.1| peptide chain release factor 1 [Pusillimonas sp. T7-7]
          Length = 355

 Score =  238 bits (607), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 178/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    RL  ++    +P +  ++   + + RER  LD  ++          D     E+
Sbjct: 5   LEQLAHRLIEVDALLAEPEIAGDMDRYRKISRERAELDPVVAVFNSFLATEGDIKTAQEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E     +    +     Q   L     DS   YLE+ AG GG ES  +A
Sbjct: 65  MADPDMRGMAEEELMLGKEKLEQLEADLQVLLLPRDPDDSRSVYLEIRAGTGGDESALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE   ++ E +   D E  G K     + G   YG LK E G HR+ R+ 
Sbjct: 125 GDLLRMYTRYAENNSWRVELVSASDSEIGGYKEVIARVDGDGVYGRLKFESGAHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  +I I+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 185 ATETQGRIHTSACTVAVLPEADEQSDIVINPADLRIDTFRASGAGGQHINKTDSAVRVTH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A+L +   Q++E+        K+ +G G    +
Sbjct: 245 LPTGLVVECQDDRSQHRNKDKALQVLAARLKDK--QQQEQHDKEAAQRKSLVGTGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       ++DGDL++   A LA  +
Sbjct: 303 IRTYNY-PQGRVTDHRINLTLYKLGHIMDGDLNELTNALLAEHQ 345


>gi|148826783|ref|YP_001291536.1| peptide chain release factor 1 [Haemophilus influenzae PittGG]
 gi|148718025|gb|ABQ99152.1| peptide chain release factor 1 [Haemophilus influenzae PittGG]
          Length = 361

 Score =  238 bits (607), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 181/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     D  +  +  + +   +E   L+  +           +      L
Sbjct: 10  LESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQNIEEAEIL 69

Query: 76  ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q   +  +  I+   +  Q   L     D  + YLE+ AG GG E+  +A
Sbjct: 70  LDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 129

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG LK E G HR+ R+ 
Sbjct: 130 GDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGEGVYGQLKFESGGHRVQRVP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 190 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 249

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++       +  +  +G G +   
Sbjct: 250 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQ--TDMRRNLLGSGDRSDK 307

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      +V++G +D+ ++  +   +
Sbjct: 308 IRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQPIITEYQ 350


>gi|300722130|ref|YP_003711413.1| peptide chain release factor RF-2 [Xenorhabdus nematophila ATCC
           19061]
 gi|297628630|emb|CBJ89208.1| peptide chain release factor RF-2 [Xenorhabdus nematophila ATCC
           19061]
          Length = 310

 Score =  238 bits (607), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 171/308 (55%), Positives = 220/308 (71%), Gaps = 1/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
            +ER  L++ +  I ++   L D   LLELA+E DD     E    L +++ ++   +F 
Sbjct: 2   GKERSSLESIVETIDQLDQGLEDVNGLLELAVEADDEETFNEAVAELDQLEEKLGLLEFR 61

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            + SGE DS + YL++ AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E  DG+ AG+
Sbjct: 62  RMFSGEYDSANCYLDLQAGSGGTEAQDWASMLMRMYLRWAESKGFKTEIIEESDGDVAGL 121

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSFSS ++YP VDD I+IEI+ 
Sbjct: 122 KSATIKIIGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINP 181

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID YRASGAGGQHVN T+SAVRITH+PTG+V QCQ +RSQHKNK QA   L+AKLY
Sbjct: 182 ADLRIDVYRASGAGGQHVNKTESAVRITHMPTGIVTQCQTDRSQHKNKDQAMKQLKAKLY 241

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           ELE+QK+       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD 
Sbjct: 242 ELEMQKKNADKQAMEENKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQSVLDGDLDK 300

Query: 346 FMKATLAI 353
           F++A+L  
Sbjct: 301 FIEASLKA 308


>gi|332678840|gb|AEE87969.1| Peptide chain release factor 1 [Francisella cf. novicida Fx1]
          Length = 361

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 186/346 (53%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   ++    +  +  +  + + L +E  HL+  +   KE    L D     E+
Sbjct: 9   LQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALEDKQTAYEM 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D   +     +     + I+      Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LNEKDAELVEMAKEELKLANEAIEKLESELQILLLPRDPNDDANVFLEIRAGTGGDEASI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L +MY+++AE+R +K E +   +GE  G K     I G   Y  LK E G HR+ R
Sbjct: 129 FSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   I+I+ +D ++DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++     ++ K+ +G G   
Sbjct: 249 THIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQ--SDTRKSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+      +V++G LD  ++  +   +
Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQ 351


>gi|118498113|ref|YP_899163.1| peptide chain release factor 1 [Francisella tularensis subsp.
           novicida U112]
 gi|194323340|ref|ZP_03057124.1| peptide chain release factor 1 [Francisella tularensis subsp.
           novicida FTE]
 gi|166223559|sp|A0Q844|RF1_FRATN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118424019|gb|ABK90409.1| protein chain release factor A [Francisella novicida U112]
 gi|194322704|gb|EDX20184.1| peptide chain release factor 1 [Francisella tularensis subsp.
           novicida FTE]
          Length = 361

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 185/346 (53%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   ++    +  +  +  + + L +E  HL+  +   KE    L D     E+
Sbjct: 9   LQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALEDKQAAYEM 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D   +     +     + I+      Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LNEKDAELVEMAKEELKLANEAIEKLESELQILLLPRDPNDDANVFLEIRAGTGGDEASI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L +MY+++AE+R +K E +   +GE  G K     I G   Y  LK E G HR+ R
Sbjct: 129 FSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   I+I+ +D ++DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTGVVV+CQ +RSQHKN+A A  ML++KL + E+ K+++     ++ K+ +G G   
Sbjct: 249 THIPTGVVVECQDQRSQHKNRAAAMLMLKSKLLQAEIDKQQKEQ--SDTRKSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+      +V++G LD  ++  +   +
Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQ 351


>gi|30692913|ref|NP_851097.1| HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109); translation release
           factor/ translation release factor, codon specific
           [Arabidopsis thaliana]
 gi|13568392|emb|CAC36322.1| translation releasing factor2 [Arabidopsis thaliana]
 gi|332006670|gb|AED94053.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana]
          Length = 455

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 139/358 (38%), Positives = 212/358 (59%), Gaps = 4/358 (1%)

Query: 1   MKLSR-QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
           ++++  ++  +    +     Q ++ L +K  D   W +  +A+  +     L + +  +
Sbjct: 87  VEIASARVEEIRASANLQQLEQEITNLESKATDTSFWDDRTKAQETLSSLNDLKDRMRLL 146

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSNDA 117
            E +  + D   +++L  E D   +           +    ++  +   LLSG  D   A
Sbjct: 147 SEFKTMVEDAETIVKLTEEMDSTDVSLLEEAMGIIKELNKSLDKFELTQLLSGPYDKEGA 206

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            + + AGAGGT++QDWA+MLLRMY RW EK+++KT+ +E+ +GEEAGIKSATL I+G  A
Sbjct: 207 VVYITAGAGGTDAQDWADMLLRMYMRWGEKQRYKTKVVEMSNGEEAGIKSATLEIEGRYA 266

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRAS 236
           YG++ GE+G HR+VR SP++S   R TSFS + V P+  ++++ IEI E D  I   RA 
Sbjct: 267 YGYISGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAG 326

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ+VN  ++AVRITHIPTGV V+C +ERSQ  NK +A   L+AKL  +  ++R    
Sbjct: 327 GKGGQNVNKVETAVRITHIPTGVAVRCTEERSQLANKTRALIRLKAKLMVIAEEQRATEI 386

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                   +  WG+QIR+YV  PY++VKD+RT  E +  + V+DGDLD F+KA L  K
Sbjct: 387 KEIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDITSVMDGDLDPFIKAYLKHK 444


>gi|218461792|ref|ZP_03501883.1| peptide chain release factor 2 [Rhizobium etli Kim 5]
          Length = 320

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 227/309 (73%), Positives = 271/309 (87%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD+ I+ +K+++ +L DN+ L+EL  EE D S+++E  D L+ +K E   +Q E
Sbjct: 1   MRERQQLDDGINGVKQLEQQLNDNIELIELGEEEGDQSVVKEAEDTLKALKAEAARRQVE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LSGEAD ND YLEVH+GAGGTESQDWANMLLRMYTRWAE+++FK E LE+HDGEEAGI
Sbjct: 61  AMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSSIWVYPVVDDSI+IEI+E
Sbjct: 121 KSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSIQIEINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VVQCQQERSQHKN+A+AW+MLRA++Y
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDMLRARMY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KRE+ AN   +SKT+IGWG QIRSYVLQPYQ+VKDLRT +  T+P DVLDGDL++
Sbjct: 241 EAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVASTAPDDVLDGDLNE 300

Query: 346 FMKATLAIK 354
           FM+A LA +
Sbjct: 301 FMEAALAHR 309


>gi|118475480|ref|YP_892510.1| peptide chain release factor 2 [Campylobacter fetus subsp. fetus
           82-40]
 gi|166223624|sp|A0RQM7|RF2_CAMFF RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|118414706|gb|ABK83126.1| peptide chain release factor 2 [Campylobacter fetus subsp. fetus
           82-40]
          Length = 369

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 168/354 (47%), Positives = 230/354 (64%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL+ ++  +  +    +   RL  +      P  W ++ +A  + +E+  + N +   K 
Sbjct: 12  KLNTKVQNISRVIKPQDIEIRLKEIEDIENRPEFWNDIKKASEIGKEKTKISNMLCKFKN 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  + D   L ELA  EDD   +    ++ Q ++ ++   +   +LSGE DS +A + +
Sbjct: 72  VKSAISDAYELYELANAEDDEQTINSLFEDAQNLENKITNLEISMMLSGEDDSKNAIVSI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTES DWA+ML RMY R+ E+  FK E L+  +G+EAG+K  + ++KG NAYG+L
Sbjct: 132 HPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGDEAGLKDVSFIVKGENAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVR SP+DS  RRHTSFSS+ V P VDD I IEI E D R+D YRASGAGGQ
Sbjct: 192 KAENGIHRLVRTSPFDSAGRRHTSFSSVMVSPEVDDDIAIEIEEKDLRLDYYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+VVQCQ +RSQHKNKA A  ML+++LYE EL K++E  N  E 
Sbjct: 252 HVNKTESAVRITHIPTGIVVQCQNDRSQHKNKATAMKMLKSRLYEFELMKQQEANNAIE- 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            K+EIGWG QIRSYVL PYQ VKD R+    +    +LDGD+   +++ L  +K
Sbjct: 311 -KSEIGWGHQIRSYVLFPYQQVKDTRSGEAYSQTDAILDGDIKKIIESVLISQK 363


>gi|126665163|ref|ZP_01736146.1| peptide chain release factor 1 [Marinobacter sp. ELB17]
 gi|126630533|gb|EBA01148.1| peptide chain release factor 1 [Marinobacter sp. ELB17]
          Length = 364

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 121/348 (34%), Positives = 191/348 (54%), Gaps = 11/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   ++    D  +  N  + + L RE   ++  +   +  Q  L D     EL
Sbjct: 9   LEQLVERFEEVSALLSDAGVIANQNKFRELSREYAEIEPVVQCFQAWQHSLVDINEAREL 68

Query: 76  ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           + + D  + ++E ++          +      Q   L     D  + +LEV AG GG E+
Sbjct: 69  SKDGDADADMREMAEEELHTAQQASEELDAELQGLMLPKDPNDGKNVFLEVRAGTGGDEA 128

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY+R+AE+R+++ E L   +GE  G K     + G   YG LK E GVHR+
Sbjct: 129 AIFAGDLFRMYSRFAERRRWQVEILSASEGEHGGYKEVIARVAGSGVYGTLKFESGVHRV 188

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ V P  D++  +EI++ D R+DT+RASGAGGQHVN TDSA+
Sbjct: 189 QRVPETESQGRIHTSACTVAVMPEADEAEAVEINKGDLRVDTFRASGAGGQHVNKTDSAI 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+P+G+VV+CQ+ERSQHKN+A+A ++L ++L  +E ++     ++ E+ K+ +G G 
Sbjct: 249 RITHLPSGLVVECQEERSQHKNRAKAMSLLASRLQNIETER--AHQSMAETRKSLVGSGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+      +V+ GDLD  +K  L   +
Sbjct: 307 RSERIRTYNF-PQSRVTDHRINLTLYKLDEVIAGDLDSVVKPLLQEHQ 353


>gi|37527422|ref|NP_930766.1| peptide chain release factor 2 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36786857|emb|CAE15922.1| Peptide chain release factor 2 (RF-2) [Photorhabdus luminescens
           subsp. laumondii TTO1]
          Length = 310

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 173/308 (56%), Positives = 220/308 (71%), Gaps = 1/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
            +ER  L+  +  I +++  L D   LLELA+E DD     E    L++++ ++   +F 
Sbjct: 2   GKERSSLEEIVETIDQLEQGLEDVQGLLELAVEADDEETFNEAVVELEQLEEKLGQLEFR 61

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            + SGE DS D YL++ AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E  DGE AG+
Sbjct: 62  RMFSGEYDSADCYLDLQAGSGGTEAQDWASMLMRMYLRWAESKGFKTEIIEESDGEVAGL 121

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSFSS ++YP VDD I+IEI+ 
Sbjct: 122 KSATIKIMGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINP 181

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLY
Sbjct: 182 ADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLY 241

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           ELE+QK+       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD 
Sbjct: 242 ELEMQKKNANKQEMEENKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQSVLDGDLDK 300

Query: 346 FMKATLAI 353
           F++A+L  
Sbjct: 301 FIEASLKA 308


>gi|78776561|ref|YP_392876.1| peptide chain release factor 2 [Sulfurimonas denitrificans DSM
           1251]
 gi|123550812|sp|Q30TP0|RF2_SULDN RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|78497101|gb|ABB43641.1| bacterial peptide chain release factor 2 (bRF-2) [Sulfurimonas
           denitrificans DSM 1251]
          Length = 365

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 168/352 (47%), Positives = 239/352 (67%), Gaps = 2/352 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS++++ + G+ + D   +R++ ++        W +   A ++ +++   +  +      
Sbjct: 13  LSKKMSNITGVVEPDKLYKRVAQIDELENSQDFWNDSSNAALVQKDKTQCERKLKKYNLA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ + D   L E+A EE+D  ++ E  +  Q I+  +   + E LLS E D N+A L +H
Sbjct: 73  KNAIDDAKELYEMAKEENDEDLIAECFNGAQHIEDLIRTMEIEVLLSEETDGNNAILSIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA++LLRMY R+AE+R +  E L+   G+EAGIK  +LLI G NAYG+LK
Sbjct: 133 PGAGGTESQDWASILLRMYKRFAERRGWSVEVLDYQAGDEAGIKDVSLLISGENAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVRISP+DSN++RHTSFSS+ V P VDD I I I + D R+DTYR+SGAGGQH
Sbjct: 193 VENGIHRLVRISPFDSNAKRHTSFSSVMVSPEVDDDINIVIEDRDIRVDTYRSSGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+RITHI TGVVVQCQ +RSQHKN+A A  ML+++LYELEL+ ++         
Sbjct: 253 VNKTESAIRITHIATGVVVQCQNDRSQHKNRATAMKMLKSRLYELELENQKAEIAGIA-- 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K+EIGWG QIRSYV+QPYQ +KD R+NI  ++ S +LDGD+D  ++  L  +
Sbjct: 311 KSEIGWGHQIRSYVMQPYQQIKDTRSNIAYSNVSAILDGDIDKMIEDVLISQ 362


>gi|319776412|ref|YP_004138900.1| peptide chain release factor RF-1 [Haemophilus influenzae F3047]
 gi|329123576|ref|ZP_08252138.1| peptide chain release factor RF1 [Haemophilus aegyptius ATCC 11116]
 gi|317451003|emb|CBY87233.1| peptide chain release factor RF-1 [Haemophilus influenzae F3047]
 gi|327470318|gb|EGF15778.1| peptide chain release factor RF1 [Haemophilus aegyptius ATCC 11116]
          Length = 361

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 181/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     D  +  +  + +   +E   L+  +           +      L
Sbjct: 10  LESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQNIEEAEIL 69

Query: 76  ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q   +  +  I+   +  Q   L     D  + YLE+ AG GG E+  +A
Sbjct: 70  LDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 129

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG LK E G HR+ R+ 
Sbjct: 130 GDLFRMYSRYAESKRWRVEMLSANESEQGGYKELIVKVTGEGVYGQLKFESGGHRVQRVP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 190 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 249

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++       +  +  +G G +   
Sbjct: 250 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQ--TDMRRNLLGSGDRSDK 307

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      +V++G +D+ ++  +   +
Sbjct: 308 IRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDELIQPIITEYQ 350


>gi|254373464|ref|ZP_04988952.1| peptide chain release factor 1 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151571190|gb|EDN36844.1| peptide chain release factor 1 [Francisella novicida GA99-3549]
          Length = 361

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 186/346 (53%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   ++    +  +  +  + + L +E  HL+  +   KE    L D     E+
Sbjct: 9   LQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALKDKQAAYEM 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D   +     +     + I+      Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LNEKDAELVEMAKEELKLANEAIEKLESELQILLLPRDPNDDANVFLEIRAGTGGDEASI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L +MY+++AE+R +K E +   +GE  G K     I G   Y  LK E G HR+ R
Sbjct: 129 FSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   I+I+ +D ++DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++     ++ K+ +G G   
Sbjct: 249 THIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQ--SDTRKSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+      +V++G LD  ++  +   +
Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQ 351


>gi|333029659|ref|ZP_08457720.1| peptide chain release factor RF-2 [Bacteroides coprosuis DSM 18011]
 gi|332740256|gb|EGJ70738.1| peptide chain release factor RF-2 [Bacteroides coprosuis DSM 18011]
          Length = 370

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 132/358 (36%), Positives = 205/358 (57%), Gaps = 11/358 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D D+    L     +T+ P  W +   A+  M+  + +++ I   +  
Sbjct: 10  IKERTLALRRYLDIDSKKIELEEEQLRTQAPDFWDDPKVAQSQMKLVKGIEDWIKGYENS 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
                +  +  +     D+    +E      +  + +E  + +++L  EAD     L+++
Sbjct: 70  VALTEELELAFDFYK--DELVSEEEVDAAYNKALVCIENLELKNMLRQEADQLGCILKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA+ML+R+Y RWAE   +K     + +G+EAGIK+ T+ ++G  AYG+LK
Sbjct: 128 SGAGGTESQDWASMLMRLYLRWAEDHNYKATLSNLQEGDEAGIKTCTIQVEGEYAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SPY++  +R TSF+SI+V P+VD+SIE+ I  S    D +R+ GAGGQ+
Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASIFVTPLVDESIEVTIDPSAITWDLFRSGGAGGQN 247

Query: 243 VNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  ++ VR+ +            ++V+  + RSQ  N+  A  +LR+ LYE ELQKR  
Sbjct: 248 VNKVETGVRLRYQYKDPDTGQEEEILVENTESRSQLDNRENAMRLLRSILYEKELQKRLA 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E SK +I WG QIRSYV    + VKD RTN + +  + V+DGD+D+F+KA L 
Sbjct: 308 ELRKIEDSKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGDIDEFIKAYLM 364


>gi|323142096|ref|ZP_08076944.1| peptide chain release factor 1 [Phascolarctobacterium sp. YIT
           12067]
 gi|322413483|gb|EFY04354.1| peptide chain release factor 1 [Phascolarctobacterium sp. YIT
           12067]
          Length = 355

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 116/351 (33%), Positives = 185/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D       R   L  K  DP +  +        +    L+  ++  +E +D +     
Sbjct: 1   MLDKLQALEDRYLDLEAKISDPEVIADQTNWLKATKAHAKLEPIVTAYREYRDMIKARDE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             EL    DD  +++   + L+ +K ++E  +       L S   D  +  +E+  GAGG
Sbjct: 61  AEELLAAGDDEELVEMAKEELKELKPQIEEYEEKLTILLLPSDPNDDKNVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A +L RMY R+AE R ++ E ++ +  E  G K     I G + Y  +K E GV
Sbjct: 121 DEAALFAGVLFRMYLRYAETRGWRVEVMDSNPTELGGFKEVVFQISGDSVYSRMKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + +++EI+ +D R+DTYRA GAGGQ+VN T+
Sbjct: 181 HRVQRVPETESQGRVHTSTVTVAVLP-EAEEVDVEINPADLRVDTYRAGGAGGQYVNKTE 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG+V QCQ E+SQ KN+ +   +LRA++  LE  + E+ A   E  K+++G
Sbjct: 240 SAVRITHIPTGIVAQCQDEKSQLKNREKCMRVLRARI--LEQAQEEQRAATAEDRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++GDLD+ + A +  K+
Sbjct: 298 TGDRSERIRTYNY-PQGRVTDHRIGLTLHKLDSIVNGDLDELLGALITAKQ 347


>gi|261338116|ref|ZP_05966000.1| peptide chain release factor 2 [Bifidobacterium gallicum DSM 20093]
 gi|270276738|gb|EFA22592.1| peptide chain release factor 2 [Bifidobacterium gallicum DSM 20093]
          Length = 376

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 140/353 (39%), Positives = 207/353 (58%), Gaps = 1/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   +   +    D +    + + L  +  +P LW +   A+ +  +   + + +  +  
Sbjct: 12  EARAKYEEIALALDVNRLQSQAAQLEQEAAEPGLWDDPEHAQKVTSKLSAVQSQLKHLAS 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              R+ D   L+EL  EE D   L E    ++ I  ++   + ++L+ GE D   A + +
Sbjct: 72  AASRIDDVETLVELGREEADQDTLDEAQSEVESITNDLRDMEIQTLMDGEYDERSAVVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY RWAE+  +K + ++    EEAGIKSAT  +  P AYG L
Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+D+  RR TSF+++ V P+V+ +  IE+ ES+ R+DTY ASG GGQ
Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIEVPESEIRVDTYCASGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVRITHIPTG+VV  Q ERSQ +N+A A  +L+++L  L  ++  +       
Sbjct: 252 GVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHEEEAKKKKELAG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +  WG Q+RSYVL PYQMVKDLRT  E +    V DGD+D F++A +  +
Sbjct: 312 D-IKASWGDQMRSYVLHPYQMVKDLRTGEETSQTQAVFDGDIDAFIQAGIRWR 363


>gi|188587462|ref|YP_001919007.1| peptide chain release factor 1 (bRF-1) [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|229470350|sp|B2A3J0|RF1_NATTJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|179352149|gb|ACB86419.1| peptide chain release factor 1 (bRF-1) [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 357

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 117/352 (33%), Positives = 190/352 (53%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  +   +R   L     DP +  +  + K   +E   L+  ++  ++  +   +   
Sbjct: 1   MLDKLEGIEKRYQELEDLMSDPEVINDPEKLKQYSKEHASLEEIVNKYRQYLETKQEFEE 60

Query: 72  LLELALEEDDCSILQETSDN-----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
             E+  E D+   ++E   +       +++   +  +   L     D  +  +E+ AGAG
Sbjct: 61  AKEMLEENDEDPDMEEFLKDEIPRLENQMQEIYDSLKILLLPKDPNDEKNVIVEIRAGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMYTR+AE   +KTE ++ H+ +  G K    +I+G NAY  LK E G
Sbjct: 121 GDEAALFAADLYRMYTRYAEIMNWKTEIMDSHEKDMGGFKEIVFMIEGKNAYSRLKFESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S+ R HTS +++ V P   + +EIEI  ++ RIDT+ A+G GGQ VNTT
Sbjct: 181 VHRVQRVPSTESSGRIHTSTATVAVLP-EAEDVEIEIDTNELRIDTFCATGPGGQSVNTT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVRITH PTGVVV CQ E+SQHKN+ +A  +LRA++Y++ L   E+     E  K+++
Sbjct: 240 QSAVRITHEPTGVVVSCQDEKSQHKNRDKAMKVLRARIYDMYL--EEQQQQEAEERKSQV 297

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   + D R N        VL+G++D+ + A +  ++
Sbjct: 298 GSGDRSERIRTYNF-PQGRITDHRINFTTHRLEQVLEGEIDELIDALITTEQ 348


>gi|167855820|ref|ZP_02478572.1| peptide chain release factor 1 [Haemophilus parasuis 29755]
 gi|219871001|ref|YP_002475376.1| peptide chain release factor 1 [Haemophilus parasuis SH0165]
 gi|254790883|sp|B8F526|RF1_HAEPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|167853033|gb|EDS24295.1| peptide chain release factor 1 [Haemophilus parasuis 29755]
 gi|219691205|gb|ACL32428.1| peptide chain release factor 1 [Haemophilus parasuis SH0165]
          Length = 360

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 118/344 (34%), Positives = 184/344 (53%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+  +R   L     D  +  +  +     +E   L+  +S     +    D      L
Sbjct: 9   LDSLSERHEELQALLGDATIISDQEKFCAYSKEYSQLEEVVSTFNRWKKLHSDIEEAQIL 68

Query: 76  ALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   I  +E   N   I+   +  Q   L     D  + +LE+ AG GG E+  +A
Sbjct: 69  LDDPDMKEIAAEEIEANKAEIEQLEQNLQILLLPKDPNDEYNCFLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE ++++ E L  ++ E+ G K   + I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLYRMYSRYAESKRWRIEELSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A  +L +++ ++E +K+ +     ++ +  +G G +   
Sbjct: 249 IPTGIVVECQDERSQHKNKAKALAVLASRIVQVEKEKQAQEQ--ADTRRNLLGSGDRSDK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      +V++G +D+ ++  +   +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 349


>gi|296435987|gb|ADH18161.1| peptide chain release factor 2 [Chlamydia trachomatis G/9768]
 gi|296437848|gb|ADH20009.1| peptide chain release factor 2 [Chlamydia trachomatis G/11074]
 gi|297140348|gb|ADH97106.1| peptide chain release factor 2 [Chlamydia trachomatis G/9301]
          Length = 334

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 154/326 (47%), Positives = 205/326 (62%), Gaps = 1/326 (0%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             +      W +V+ A  +      L   +S   E+++++      LE      D  + +
Sbjct: 2   EQQAVQDGFWDDVVRAGKISERIARLKQQLSEFNELKNKVSAIQFFLEDEESSKDLEMQK 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E        + ++   +   LLSGE D N  +L ++AGAGGTES DW  MLLRMY RWA 
Sbjct: 62  ELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRWAS 121

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
              ++ E ++  DGE AGIK  TL + G  AYG+ K E GVHRLVRISP+DSN++RHTSF
Sbjct: 122 SHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSF 181

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S+ V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAVRITH PTG+VV CQ E
Sbjct: 182 ASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNE 241

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQ +N+    NML A++Y+  LQ+R E  NI   +K E+ WG QIR+YV QPY +VKD+
Sbjct: 242 RSQIQNREACMNMLCARIYQKLLQERLEKQNIDRKNKKEVSWGSQIRNYVFQPYTLVKDV 301

Query: 327 RTNIEKTSPSDVLDGD-LDDFMKATL 351
           RT  E  +   ++DG+ LD F+KA L
Sbjct: 302 RTGYEVGNIQAMMDGELLDAFIKAYL 327


>gi|120555272|ref|YP_959623.1| peptide chain release factor 1 [Marinobacter aquaeolei VT8]
 gi|166223568|sp|A1U367|RF1_MARAV RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|120325121|gb|ABM19436.1| bacterial peptide chain release factor 1 (bRF-1) [Marinobacter
           aquaeolei VT8]
          Length = 363

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 122/338 (36%), Positives = 189/338 (55%), Gaps = 9/338 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +N    D  +  N  + + L RE   ++  +   +  +  L D     EL
Sbjct: 9   LEQLVERFEEVNALLSDASVIANQDKFRDLSREFAEIEPVVKCFQAWRQSLEDIDAATEL 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           A + D         +      R +   E  Q   L     D+ + +LE+ AG GG E+  
Sbjct: 69  AKDGDADMREMAEEELASARARSEELDEELQRLMLPKDPNDTKNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AEKR+++ E L  ++GE  G K     + G   YG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAEKRRWQVEVLSENEGEHGGFKEIIARLSGDGVYGTLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D++  +EI+++D R+DT+R+SGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVAVMPEADEAEAVEINKADLRVDTFRSSGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ+ERSQHKN+A+A ++L ++L   EL+K++   ++ E+ K+ +G G   
Sbjct: 249 THLPTGIVVECQEERSQHKNRAKALSLLASRLQNAELEKQQ--KSMAETRKSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            +IR+Y   P   V D R N+      +V+ GDLD  +
Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYKLDEVIAGDLDAVV 343


>gi|45443320|ref|NP_994859.1| peptide chain release factor 2 [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108806377|ref|YP_650293.1| peptide chain release factor 2 [Yersinia pestis Antiqua]
 gi|108813248|ref|YP_649015.1| peptide chain release factor 2 [Yersinia pestis Nepal516]
 gi|145597933|ref|YP_001162009.1| peptide chain release factor 2 [Yersinia pestis Pestoides F]
 gi|170023172|ref|YP_001719677.1| peptide chain release factor 2 [Yersinia pseudotuberculosis YPIII]
 gi|186896595|ref|YP_001873707.1| peptide chain release factor 2 [Yersinia pseudotuberculosis PB1/+]
 gi|270487483|ref|ZP_06204557.1| peptide chain release factor 2 [Yersinia pestis KIM D27]
 gi|294502944|ref|YP_003567006.1| peptide chain release factor RF-2 [Yersinia pestis Z176003]
 gi|21960210|gb|AAM86823.1|AE013928_8 peptide chain release factor RF-2 [Yersinia pestis KIM 10]
 gi|45438189|gb|AAS63736.1| peptide chain release factor RF-2 [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108776896|gb|ABG19415.1| bacterial peptide chain release factor 2 (bRF-2) [Yersinia pestis
           Nepal516]
 gi|108778290|gb|ABG12348.1| bacterial peptide chain release factor 2 (bRF-2) [Yersinia pestis
           Antiqua]
 gi|145209629|gb|ABP39036.1| bacterial peptide chain release factor 2 (bRF-2) [Yersinia pestis
           Pestoides F]
 gi|169749706|gb|ACA67224.1| peptide chain release factor 2 [Yersinia pseudotuberculosis YPIII]
 gi|186699621|gb|ACC90250.1| peptide chain release factor 2 [Yersinia pseudotuberculosis PB1/+]
 gi|262360979|gb|ACY57700.1| peptide chain release factor RF-2 [Yersinia pestis D106004]
 gi|262364919|gb|ACY61476.1| peptide chain release factor RF-2 [Yersinia pestis D182038]
 gi|270335987|gb|EFA46764.1| peptide chain release factor 2 [Yersinia pestis KIM D27]
 gi|294353403|gb|ADE63744.1| peptide chain release factor RF-2 [Yersinia pestis Z176003]
          Length = 310

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 172/308 (55%), Positives = 219/308 (71%), Gaps = 1/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
            +ER  L+  ++ I +++  L D   LLELA+E DD     ET   L+ +  ++   +F 
Sbjct: 2   GKERSTLEEIVTTIDQLEQGLEDVSGLLELAVEADDEETFNETIAELEVLDGKLGQLEFR 61

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            + SGE D  + YL++ AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  DG+ AG+
Sbjct: 62  RMFSGEYDRANCYLDLQAGSGGTEAQDWASMLLRMYLRWAESRGFKTEIIEESDGDVAGL 121

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ 
Sbjct: 122 KSATVKIIGEYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINP 181

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLY
Sbjct: 182 ADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLY 241

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E E+QK+     + E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD 
Sbjct: 242 EFEMQKKNADKQVLEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDK 300

Query: 346 FMKATLAI 353
           F++A+L  
Sbjct: 301 FIEASLKA 308


>gi|152979102|ref|YP_001344731.1| peptide chain release factor 1 [Actinobacillus succinogenes 130Z]
 gi|150840825|gb|ABR74796.1| peptide chain release factor 1 [Actinobacillus succinogenes 130Z]
          Length = 374

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 184/344 (53%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+  +R   L     D  +  +  + +   +E   L+  +      +    D      L
Sbjct: 23  LDSLAERHEELQALLGDASVINDQDKFRTYSKEYAQLEEVVGAFTRWKKLNQDIEDAQLL 82

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   +  +E   N   I+   +  Q   L     D  +AYLE+ AG GG E+  +A
Sbjct: 83  LNDPDMKDMAQEEIEQNKAEIEQLEQQLQILLLPKDPHDEYNAYLEIRAGTGGDEAGIFA 142

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG LK E G HR+ R+ 
Sbjct: 143 GDLFRMYSRYAESKRWRIETLSANESEQGGYKEIIVKVIGEGVYGQLKFESGGHRVQRVP 202

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 203 KTESQGRIHTSACTVAVMPELPETELPEINPTDLRIDTYRSSGAGGQHVNTTDSAVRITH 262

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +K+       ++ +  +G G +   
Sbjct: 263 IPTGIVVECQDERSQHKNKAKAMSVLASRIAQAEQEKQ--AREQADTRRNLLGSGDRSDK 320

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      +V++G +D+ ++  +   +
Sbjct: 321 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 363


>gi|312879986|ref|ZP_07739786.1| bacterial peptide chain release factor 2 (bRF-2) [Aminomonas
           paucivorans DSM 12260]
 gi|310783277|gb|EFQ23675.1| bacterial peptide chain release factor 2 (bRF-2) [Aminomonas
           paucivorans DSM 12260]
          Length = 374

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 159/350 (45%), Positives = 215/350 (61%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  Q   L    D   A  R+  L  +  DP  W    +A+   RE   L       + +
Sbjct: 13  LRSQACELRDSLDLPAAETRIEGLLKQAADPEFWT-REDAQETTRELAQLQQKRESWETL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L +   L  L  E +D  + +E        + E+E +Q   LL  E D +DA + +H
Sbjct: 72  NRELQEMETLAALLAEGEDVDLEEEFYRRAGAFEKELERRQIFVLLDEEYDRSDAIVTIH 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG +SQDW  +L RMY RW EK  FK+  L+    +EAGIKS T  + G  AYG+LK
Sbjct: 132 AGAGGLDSQDWTEILSRMYLRWVEKEGFKSRILDQLADQEAGIKSITFEVLGDYAYGYLK 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE+GVHRLVRISP+D+  RRHTSF+S+ V PV+ +  +IEI   D ++DT+R+SGAGGQ+
Sbjct: 192 GEKGVHRLVRISPFDAAKRRHTSFASVEVLPVLPEDADIEIRPEDLKMDTFRSSGAGGQY 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVRITHIPTG++V CQ ERSQH N+A A  +L++KL+E +LQ+R+E     +  
Sbjct: 252 VNMTDSAVRITHIPTGIIVSCQVERSQHMNRATALQVLKSKLFERQLQERQEHLESLQGE 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K  I WG QIRSY LQP+Q+VKD R+  E  + + VLDGDL++ + +TL 
Sbjct: 312 KRSIAWGSQIRSYTLQPFQLVKDHRSGCEVGNVAAVLDGDLEELIMSTLR 361


>gi|62259280|gb|AAX77849.1| unknown protein [synthetic construct]
          Length = 360

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 166/327 (50%), Positives = 222/327 (67%), Gaps = 3/327 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  + ED  +W N   A+ L +++  L+N +   + I + L     LLEL  E++     
Sbjct: 25  LEMELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELGEEDESLMQE 84

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
                     ++  E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA
Sbjct: 85  IAKDTQNVASEI--EKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWA 142

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           +   FK    ++ DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTS
Sbjct: 143 DSHGFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTS 202

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q 
Sbjct: 203 FASVFISPEVDDDIDIEINPTDLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQS 262

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +RSQHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +KD
Sbjct: 263 DRSQHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIKD 321

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLA 352
           LRT +E T+   VLDGDLD F++A+L 
Sbjct: 322 LRTGVENTNTQAVLDGDLDKFIEASLK 348


>gi|293398675|ref|ZP_06642853.1| peptide chain release factor 1 [Neisseria gonorrhoeae F62]
 gi|291611146|gb|EFF40243.1| peptide chain release factor 1 [Neisseria gonorrhoeae F62]
          Length = 358

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 120/349 (34%), Positives = 175/349 (50%), Gaps = 8/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +       RL  +      P    ++   + L RE   L   +   +  +    D  
Sbjct: 4   SILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQSDLA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E+  + +      E  +  +          Q   L     D  + ++E+ AG GG E
Sbjct: 64  DAEEMLSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEIRAGTGGGE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR
Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G
Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREVQAKEAAERKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V+DGDL +   A +A  +
Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQ 349


>gi|289577389|ref|YP_003476016.1| peptide chain release factor 1 [Thermoanaerobacter italicus Ab9]
 gi|289527102|gb|ADD01454.1| peptide chain release factor 1 [Thermoanaerobacter italicus Ab9]
          Length = 356

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 121/346 (34%), Positives = 193/346 (55%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72
                 R   L+ K  DP++  NV E +  ++E   ++  +   +E +  + D      L
Sbjct: 5   LQAIEDRYVELSQKISDPNIISNVGEWRKYVKEHAAIEEIVLKYREYKKVVEDINSTKEL 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L    +E      +E S   ++ +  +E  +   +     D  +  +E+ AGAGG E+  
Sbjct: 65  LSSDEKELREMAEEELSHLEEKKEELLEEIKILLIPKDPNDEKNVIMEIRAGAGGEEAAL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A+ L RMY+ +AEK+ +K E +  ++ +  G K   L I G  AY  LK E GVHR+ R
Sbjct: 125 FAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGAYSRLKYESGVHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P   + +++EI+ +D RID +R+ G GGQ VNTTDSAVR+
Sbjct: 185 VPTTEAGGRIHTSTATVAVLP-EVEEVDVEINPNDIRIDVFRSGGHGGQSVNTTDSAVRV 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV CQ ERSQ +N+ +A  +LRAKLYE+ LQ++++   I E+ K+++G G   
Sbjct: 244 THIPTGIVVTCQDERSQLQNRERALKILRAKLYEMALQEQQKE--IAEARKSQVGTGERS 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +      +VLDGDLD+ + A +   +
Sbjct: 302 ERIRTYNF-PQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALILNDQ 346


>gi|325267755|ref|ZP_08134406.1| peptide chain release factor RF1 [Kingella denitrificans ATCC
           33394]
 gi|324980879|gb|EGC16540.1| peptide chain release factor RF1 [Kingella denitrificans ATCC
           33394]
          Length = 358

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 116/349 (33%), Positives = 180/349 (51%), Gaps = 8/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + D   N   RL  +      P    ++   + L +E   L   +   +       D  
Sbjct: 4   SILDKLQNLAHRLEEVTALLGSPEATSDMDNYRRLNQEHAELTPIVETYRAYTQAESDLA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTE 129
              E+  + +      E  +  +     ++    + L      D  + ++E+ AG GG E
Sbjct: 64  EAQEMLSDPEMKDFAAEEIEAAKAKIEMLDLALQKLLLPKDADDDKNIFIEIRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++TE +  ++ +  G K   + + G  AY  LK E G HR
Sbjct: 124 AALFAGDLLRMYSRYAERNRWQTEIVSANESDLGGYKEVIVRLVGLGAYSKLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  +IE+++ D RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELAKIELNDKDLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV+CQ  RSQH NK +A  +L A+L +  +QKRE  A      K+ IG G
Sbjct: 244 VRITHLPTGLVVECQDGRSQHTNKEKALKVLAARLND--MQKREAQAKEAAERKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V+DGD+++   A +A  +
Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDMEEITAALMAEHQ 349


>gi|224827212|ref|ZP_03700307.1| peptide chain release factor 1 [Lutiella nitroferrum 2002]
 gi|224600605|gb|EEG06793.1| peptide chain release factor 1 [Lutiella nitroferrum 2002]
          Length = 358

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 173/344 (50%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +          +++   + L RE   L   +   +  +    D     E+
Sbjct: 9   LSQLADRLEEVTHLLASEAATRDMDAFRKLTREHAELTPVVETYQAYRQCESDLATATEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D     Q   D  +          Q   L     D  + +LE+ AG GG E+  +A
Sbjct: 69  LADPDMKEFAQAEIDEGKERMASLDVELQKLLLPKDPNDEKNIFLEIRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+ +++ E +   + +  G K   + + G  A+  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYTRFAERNRWQAEIVSSSESDLGGYKEVIVRLVGFGAFSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  ++  E+ ++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATETQGRIHTSACTVAVMPEAEEIAEVVLNPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+V +CQ  RSQH NKA A  +L A++Y+++L  R +  ++    K+ IG G    +
Sbjct: 249 LPTGIVAECQDGRSQHANKASAMQVLAARIYDIQL--RAQQQSVAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       V+DGDL +   A +A  +
Sbjct: 307 IRTYNY-PQGRITDHRINLTLYKLDQVMDGDLFELTDALIAEHQ 349


>gi|304389757|ref|ZP_07371716.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|304326933|gb|EFL94172.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
          Length = 376

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 130/357 (36%), Positives = 207/357 (57%), Gaps = 4/357 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL      +  + D +   Q+++ L  +   P LW +   A+ + +        +  +++
Sbjct: 13  KLRASFATISAVMDPELLTQKIADLTQQAAAPDLWDDQEHAQKVTQSLSAAQADLQRLQK 72

Query: 62  IQDRLCDNL---ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           ++ R+ D      L      ED  +IL +     + +K +++  + ++LL+GE D   A 
Sbjct: 73  MRARIDDMEALVELGAEESGEDRDAILADAEQTYETLKQDLDAMEVKTLLNGEYDERFAV 132

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ D+A MLLRMY R+ E+  + T+ L+    EEAGIKS T  +  P AY
Sbjct: 133 VTIRSGAGGVDAADFAQMLLRMYLRYCERHHYATKVLDTSYAEEAGIKSVTFQVDAPYAY 192

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRL R+SP+++  +R TSF+++ V P+++ +  IE+ ESD +ID +R+SG 
Sbjct: 193 GMLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLIETTDHIEVPESDIKIDVFRSSGP 252

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVR+TH+PTG+V+  Q E+SQ +N+A A  +L+++L  L  Q+  +    
Sbjct: 253 GGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLMLRHQQEHDKKKE 312

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                 +  WG Q+RSY L   Q+VKDLRT  E  +P  V DGDLD F+ A +  +K
Sbjct: 313 LAGD-VKASWGDQMRSYFLYGQQLVKDLRTGYESGNPDSVFDGDLDGFIDAAIRWRK 368


>gi|241667853|ref|ZP_04755431.1| peptide chain release factor 1 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876395|ref|ZP_05249105.1| peptide chain release factor [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842416|gb|EET20830.1| peptide chain release factor [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 361

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 114/346 (32%), Positives = 184/346 (53%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   ++    + ++  +  + + L +E  HL+  +   KE    L D     E+
Sbjct: 9   LQSLIERHEEVSALLGEANVISDQNKFRDLSKEYSHLEPIVKAFKEYTQALEDKEAAYEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D   +     +     +         Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LNEKDAELVEMAKEELKSANESIERLEDELQILLLPRDPNDDANIFLEIRAGTGGDEASI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L +MY+++AE+R +K E +   +GE  G K     I G   Y  LK E G HR+ R
Sbjct: 129 FSGDLFKMYSKYAEQRGWKIEVVSASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   I+I+ +D ++DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++     ++ K  +G G   
Sbjct: 249 THIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQ--SDTRKNLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+      +V++G LD  ++  +   +
Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLILEHQ 351


>gi|119952877|ref|YP_945086.1| peptide chain release factor 2 [Borrelia turicatae 91E135]
 gi|119861648|gb|AAX17416.1| bacterial peptide chain release factor 2 [Borrelia turicatae
           91E135]
          Length = 353

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 148/350 (42%), Positives = 221/350 (63%), Gaps = 4/350 (1%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
            +L   GG FD +    +L     +  D + W +  +A+ +++ +  L   I   +++  
Sbjct: 5   NKLKMSGGSFDSNKIKVKLKEYEKQINDENFWNDNKKAQEILKNQNILKAKIEPWEDLIC 64

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
           +L D   L E+A  E+D ++L +  + L+     +      S    + D N+A+L +H+G
Sbjct: 65  KLKDLRELCEIAESEEDTALLDQDINKLREQYKHLLT---LSYFKEDIDINNAFLTIHSG 121

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGGTE+ DW +ML R+Y R++E+  +KTE +++ + E  GIKS T+ IKG  AYG+LK E
Sbjct: 122 AGGTEACDWVSMLYRIYLRYSERHGYKTELIDLLEAE-GGIKSVTIEIKGEYAYGFLKSE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G+HRLVRISP+D+  +RHTSF+S+++ PV+DD IEI I   D R+DTYRASGAGGQHVN
Sbjct: 181 VGIHRLVRISPFDAAKKRHTSFASVFIDPVIDDKIEITIKPEDIRVDTYRASGAGGQHVN 240

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T SAVRITH+ TG+V Q Q +RSQH+NK  A  +L++KLYE      ++ +   +  K 
Sbjct: 241 KTSSAVRITHLQTGIVTQSQTDRSQHRNKDLAMRVLKSKLYEHYKILEQQKSKSKQEEKK 300

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +I WG QIRSY+ QPY +VKD RT  E  +   V+DG++D+F++  L  K
Sbjct: 301 DISWGNQIRSYIFQPYTLVKDHRTKFENPNIISVMDGNIDNFIEEYLKWK 350


>gi|15602420|ref|NP_245492.1| peptide chain release factor 1 [Pasteurella multocida subsp.
           multocida str. Pm70]
 gi|13431785|sp|P57852|RF1_PASMU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|12720821|gb|AAK02639.1| PrfA [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 360

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 114/344 (33%), Positives = 182/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL-LE 74
            ++  +R   L     +  +  +  + +   +E   L++ +           +     L 
Sbjct: 9   LESLKERHEELEALLGEASVISDQDKFRAYSKEYAQLEDVVKCFARWNQLNSNMEEAQLL 68

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           L          +E       I+   +  Q   L     D  + YLE+ AG GG E+  +A
Sbjct: 69  LDDPSMKEMAQEEIEACKTEIEQVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE +++K E L  ++ E+ G K   + + G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESKRWKVEVLSANESEQGGYKEIIVKVNGEGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ SD RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESELPEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++E+     ++ +  +G G +   
Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEKERQEQAQ--ADTRRNLLGSGDRSDK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      +V++G +D+ ++  +   +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 349


>gi|229542476|ref|ZP_04431536.1| peptide chain release factor 1 [Bacillus coagulans 36D1]
 gi|229326896|gb|EEN92571.1| peptide chain release factor 1 [Bacillus coagulans 36D1]
          Length = 356

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 109/351 (31%), Positives = 176/351 (50%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD       R   LN    DP +  +  + +   +E+  L   +   +E ++       
Sbjct: 1   MFDRLQAVEDRYEKLNELLSDPEIVNDPKKLREYSKEQSDLQETVQVYREYKEVQKQLQD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
              L  E+ D  +     + +  ++ ++   +       L     D  +  +E+   AGG
Sbjct: 61  AKSLLSEKLDPEMKDMVKEEIHELESKIPEYEERLKILLLPKDPNDEKNVIVEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY R+AE + +K + +E +     G K    ++ G  AY  LK E G 
Sbjct: 121 DEAALFAGDLYRMYMRYAESQGWKIDVIEANVTGIGGYKEIVFMVNGKGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +E++I+E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EAEEVEVDINEKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+VV CQ E+SQ KNK +A  +LRA++Y+    ++E  A    + K+ +G
Sbjct: 240 SAVRLTHIPTGIVVSCQDEKSQIKNKEKAMKVLRARIYDKF--QQEAQAEYDANRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       VLDG LD+ + A +   +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQVLDGKLDEIIDALILEDQ 347


>gi|90424348|ref|YP_532718.1| peptide chain release factor 2 [Rhodopseudomonas palustris BisB18]
 gi|90106362|gb|ABD88399.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodopseudomonas
           palustris BisB18]
          Length = 322

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 200/309 (64%), Positives = 250/309 (80%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L++++  I +++  L DN+ ++EL   E+D  ++ E    L+ +K EV  ++ E
Sbjct: 1   MQERTSLEDSLGGIGKVERELTDNVDMIELGEAENDEGVVAEAEAALKALKKEVARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D+YLEVHAGAGGTESQDWA+MLLRMYTRWAEK  FK E LE   GEEAGI
Sbjct: 61  ALLSGEADRFDSYLEVHAGAGGTESQDWASMLLRMYTRWAEKHGFKIEYLEETQGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PVVD++I+I+I+E
Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVVDNTIKIDIAE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ  RSQHKNKAQAW+MLRA+LY
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNKAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ +  + VLDGDLD+
Sbjct: 241 EIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300

Query: 346 FMKATLAIK 354
           FM ATLA +
Sbjct: 301 FMGATLAQR 309


>gi|46446965|ref|YP_008330.1| peptide chain release factor RF-2 [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|46400606|emb|CAF24055.1| probable peptide chain release factor RF-2 [Candidatus
           Protochlamydia amoebophila UWE25]
          Length = 326

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 150/323 (46%), Positives = 216/323 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +   W N  +A++++ E + L       +E++ +  +   LL  A E ++ S ++E  
Sbjct: 1   MGESSFWNNSEQAQLIINECRDLRAWTVPYQELKTKFENCKELLPEAYELNEESFIEELL 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L  I+  +   + + +LSGE D+ D YL +++GAGGTE+ DWA ML RMY RWA K+ 
Sbjct: 61  RDLDSIEKVLGDLEVQRMLSGEMDNKDCYLTINSGAGGTEACDWAQMLSRMYQRWAAKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K E ++  DG+  G+KS TL  +G  AYG+ K E+GVHRLVRISP+DSN++RHTSF+S+
Sbjct: 121 WKIEIIDFVDGDVVGLKSITLRFQGSYAYGYSKAEKGVHRLVRISPFDSNAKRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +   I++EI   D R+DT+R+SGAGGQHVN TDSAVR+TH+PTG+VV CQ +RSQ
Sbjct: 181 DVSPEITTDIQVEIKPEDVRVDTFRSSGAGGQHVNKTDSAVRLTHMPTGIVVSCQTQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK   + MLR+KLYE+E+ +RE+  N  +  K E  WG QIR+YV QPY +VKD RT 
Sbjct: 241 VQNKEACYQMLRSKLYEMEVLEREKALNNLKGEKKENAWGSQIRNYVFQPYTLVKDTRTK 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLA 352
            E  +   V+DG+LD+F+ A L 
Sbjct: 301 AESGNIQAVMDGELDEFVNAYLK 323


>gi|33152002|ref|NP_873355.1| peptide chain release factor 1 [Haemophilus ducreyi 35000HP]
 gi|46576749|sp|Q7VMV9|RF1_HAEDU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33148224|gb|AAP95744.1| peptide chain release factor 1 (RF-1) [Haemophilus ducreyi 35000HP]
          Length = 360

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 183/344 (53%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R   L     D  +  +  + +   +E   L+  ++     +    D      L
Sbjct: 9   LDCLSERHEELQALLGDASVIADQDKFRAYSKEYAQLEEVVATFNRWKKLNSDIEEAELL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   +  E     +     +E   Q   L     D  +A+LE+ AG GG E+  +A
Sbjct: 69  LDDPDMKEMATEEITQNKAEIECLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE ++++ E +  ++ E+ G K   + I G + YG LK E G HR+ R+ 
Sbjct: 129 GDLYRMYSRYAESKRWRIEEMSANESEQGGYKEIIVKISGESVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           +PTG+VV+CQ ERSQHKNKA+A  +L +++ ++E +++       ++ +  +G G +   
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQ--AMAQADTRRNLLGTGDRSDK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      +V++G +D+ ++  +   +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 349


>gi|314923649|gb|EFS87480.1| peptide chain release factor 2 [Propionibacterium acnes HL001PA1]
 gi|314967087|gb|EFT11186.1| peptide chain release factor 2 [Propionibacterium acnes HL082PA2]
 gi|315092708|gb|EFT64684.1| peptide chain release factor 2 [Propionibacterium acnes HL060PA1]
 gi|315103819|gb|EFT75795.1| peptide chain release factor 2 [Propionibacterium acnes HL050PA2]
 gi|327327221|gb|EGE68997.1| peptide chain release factor 2 [Propionibacterium acnes HL103PA1]
          Length = 371

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 221/353 (62%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D +     ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 16  LDASLSSIENVLDPEAKKAEIADLEKQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A  +DD   L E +    +++ E++  +  +LLSG+ D  +A + + 
Sbjct: 76  RARIEDVHVLLEFAAADDDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RW+E+  +K E L+    EEAGIKSAT ++  P AYG L 
Sbjct: 136 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 196 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL E   +++E   N  +S 
Sbjct: 256 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSE 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRTN E  +   V DGD+DDF+ A +  ++
Sbjct: 316 GN--SWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 366


>gi|89256990|ref|YP_514352.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica LVS]
 gi|115315350|ref|YP_764073.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134301375|ref|YP_001121343.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|156503190|ref|YP_001429255.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|167009371|ref|ZP_02274302.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica FSC200]
 gi|254368245|ref|ZP_04984265.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica 257]
 gi|290954490|ref|ZP_06559111.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312095|ref|ZP_06802908.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|119361542|sp|Q2A1Q0|RF1_FRATH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361543|sp|Q0BKE8|RF1_FRATO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223558|sp|A7NE96|RF1_FRATF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223560|sp|A4IWC1|RF1_FRATW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|89144821|emb|CAJ80160.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica LVS]
 gi|115130249|gb|ABI83436.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134049152|gb|ABO46223.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|134254055|gb|EBA53149.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica 257]
 gi|156253793|gb|ABU62299.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica FTNF002-00]
          Length = 361

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 186/346 (53%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   ++    +  +  +  + + L +E  HL+  +   KE    L D     E+
Sbjct: 9   LQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALEDKQAAYEM 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D   +     +     + I+      Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LNEKDAELVEMAKEELKLANEAIEKLESELQIFLLPRDPNDDANVFLEIRAGTGGDEASI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L +MY+++AE+R +K E +   +GE  G K     I G   Y  LK E G HR+ R
Sbjct: 129 FSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   I+I+ +D ++DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++     ++ K+ +G G   
Sbjct: 249 THIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQ--SDTRKSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+      +V++G LD  ++  +   +
Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQ 351


>gi|254369840|ref|ZP_04985850.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157122799|gb|EDO66928.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 361

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 116/346 (33%), Positives = 186/346 (53%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   ++    +  +  +  + + L +E  HL+  +   KE    L D     E+
Sbjct: 9   LQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALEDKQAAYEM 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D   +     +     + I+      Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LNEKDAELVEMAKEELKLANEAIEKLESELQIFLLPRDPNDDANVFLEIRAGTGGDEASI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L +MY+++AE+R +K E +   +GE  G K     I G   Y  LK E G HR+ R
Sbjct: 129 FSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           I   +S  R HTS  ++ V P  D+   I+I+ +D ++DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 IPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++     ++ K+ +G G   
Sbjct: 249 THIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQ--SDTRKSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+      +V++G LD  ++  +   +
Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQ 351


>gi|93355984|gb|ABF10073.1| peptide chain release factor RF-1 [Cupriavidus metallidurans CH34]
          Length = 371

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 176/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  +N          N+ + + L RE   L        + +    D      L
Sbjct: 20  LDQLAERLDEVNALLAREDATANMDQYRKLSREHAELSPVAEQYGQYRQAQDDLATAQAL 79

Query: 76  ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +      +  D  +   +      Q   L     D  +  LE+ AG GG ES  +A
Sbjct: 80  LDDPEMKEFAADEIDAARERLQSLENSLQTLLLPKDPNDDRNLLLEIRAGTGGEESALFA 139

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+R+++ E +     +  G K   + I G  A+  LK E G HR+ R+ 
Sbjct: 140 ADLLRMYTRYAERRRWQVEIMSESPSDLGGYKEVIVRIAGDAAFSRLKFESGGHRVQRVP 199

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  E+EI+ SD R+DT+RASGAGGQHVN TDSAVR+TH
Sbjct: 200 ATESQGRIHTSACTVAVMPEADEVGEVEINPSDLRVDTFRASGAGGQHVNKTDSAVRLTH 259

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A++ +++L  R   A    + +  IG G    +
Sbjct: 260 LPTGIVVECQDDRSQHRNKEKAMKVLAARIKDMQL--RAAQAKEANTRRNLIGSGDRSDR 317

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       ++DGDLD+ + A  A  +
Sbjct: 318 IRTYNF-PQGRVTDHRINLTLYKIDMIMDGDLDELISALSAEHQ 360


>gi|310829208|ref|YP_003961565.1| peptide chain release factor 2 [Eubacterium limosum KIST612]
 gi|308740942|gb|ADO38602.1| peptide chain release factor 2 [Eubacterium limosum KIST612]
          Length = 310

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 176/306 (57%), Positives = 223/306 (72%), Gaps = 3/306 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+E + L        +++D L D L++ EL  E ++   L +T +       E+E  + E
Sbjct: 1   MKELKILRQKKGEYDKLKDNLDDILVMFELIDEGEEMDELPDTIEAFG---KELEKFKLE 57

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGE DSN+A + +H GAGGTESQDWA MLLRMYTRWAE++ FK ++L++  G+ AGI
Sbjct: 58  TLLSGEYDSNNAIISLHPGAGGTESQDWAEMLLRMYTRWAERKGFKVKSLDLQPGDVAGI 117

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLLI+G NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S+ V P VDDS+EIEI+ 
Sbjct: 118 KSATLLIEGINAYGYLKTERGVHRLVRISPFDSSGRRHTSFASLDVTPEVDDSVEIEINP 177

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D R+DTYRASGAGGQHVN T SA+RITHIPTGVVVQCQ ERSQH+NK  A NML+ KL 
Sbjct: 178 DDIRVDTYRASGAGGQHVNKTSSAIRITHIPTGVVVQCQNERSQHQNKEVAMNMLKGKLV 237

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+  Q+++E  +      ++I WG QIRSYV  PY MVKD RTN+E  +   V+DGDLD 
Sbjct: 238 EIMEQEQKEKLDDVVGDYSQIAWGSQIRSYVFHPYNMVKDHRTNVEVGNIQSVMDGDLDQ 297

Query: 346 FMKATL 351
           FM A L
Sbjct: 298 FMNAYL 303


>gi|227874895|ref|ZP_03993048.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35243]
 gi|306818191|ref|ZP_07451922.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35239]
 gi|307701756|ref|ZP_07638770.1| peptide chain release factor 2 [Mobiluncus mulieris FB024-16]
 gi|227844670|gb|EEJ54826.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35243]
 gi|304649155|gb|EFM46449.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35239]
 gi|307613014|gb|EFN92269.1| peptide chain release factor 2 [Mobiluncus mulieris FB024-16]
          Length = 378

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 129/362 (35%), Positives = 206/362 (56%), Gaps = 9/362 (2%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL    + +  + D     ++++ L  +   P LW +   A+ + +      + +  ++ 
Sbjct: 12  KLQATFDTVEAVMDPALLQKKIADLTAQASAPDLWDDQENAQKITQTLSATQSDLERLQT 71

Query: 62  IQDRLCDN--------LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113
           ++ RL D           L+      D  +I+++     + +  ++   +  +LL+GE D
Sbjct: 72  MKTRLEDFAALVELGGEELMSEDGRADGQAIMEDAEATYKTLAADLAALEVRTLLNGEYD 131

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
              A + + +GAGG ++ D+A MLLRMY RWAE+  + T+ ++    EEAGIKSAT  I 
Sbjct: 132 ERFAVVTIRSGAGGVDAADFAQMLLRMYLRWAERHGYPTKVMDTSYAEEAGIKSATFEID 191

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
            P AYG L  E G HRL R+SP+++  +R TSF+++ V P+++ +  I++ ESD +ID +
Sbjct: 192 APYAYGRLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLIETTDHIDVPESDIKIDVF 251

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R+SG GGQ VNTTDSAVR+TH+PTG+V+  Q E+SQ +N+A A  +L+++L  L  Q+  
Sbjct: 252 RSSGPGGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLLLRHQQEH 311

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           E          +  WG Q+RSY L   Q+VKDLRT  E  +P  V DGDLD F+   +  
Sbjct: 312 EKKKELAGD-VKASWGDQMRSYFLYGQQLVKDLRTGHESNNPDAVFDGDLDAFIDEGIRW 370

Query: 354 KK 355
           +K
Sbjct: 371 RK 372


>gi|253988706|ref|YP_003040062.1| peptide chain release factor 2 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|211637969|emb|CAR66597.1| peptide chain release factor 2 (rf-2) [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253780156|emb|CAQ83317.1| peptide chain release factor 2 (rf-2) [Photorhabdus asymbiotica]
          Length = 310

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 172/308 (55%), Positives = 220/308 (71%), Gaps = 1/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
            +ER  L+  +  I +++  L D   LLELA+E DD     E    L++++ ++   +F 
Sbjct: 2   GKERSSLEEIVETIDQLEQGLEDVQGLLELAVEADDEETFHEAVAELEQLEGKLGQLEFR 61

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            + SGE DS + YL++ AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E  DGE AG+
Sbjct: 62  RMFSGEYDSANCYLDLQAGSGGTEAQDWASMLMRMYLRWAESKGFKTEIIEESDGEVAGL 121

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSFSS ++YP VDD I+IEI+ 
Sbjct: 122 KSATIRIMGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINP 181

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLY
Sbjct: 182 ADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLY 241

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           ELE+QK+       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD 
Sbjct: 242 ELEMQKKNANRQEMEENKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQSVLDGDLDK 300

Query: 346 FMKATLAI 353
           F++A+L  
Sbjct: 301 FIEASLKA 308


>gi|163815255|ref|ZP_02206632.1| hypothetical protein COPEUT_01415 [Coprococcus eutactus ATCC 27759]
 gi|158449450|gb|EDP26445.1| hypothetical protein COPEUT_01415 [Coprococcus eutactus ATCC 27759]
          Length = 358

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 121/351 (34%), Positives = 197/351 (56%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +  V +L  +N +  DP +  +  + + LM+E+  L   +   KE +D       
Sbjct: 1   MFDRLEELVDKLDTINNQLTDPDVVTDQNKFRKLMKEQSDLVPIVDKYKEYKDAKTTIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            LE+  EE+D  + +   + +   K  +E  +       L     DS +  +E+ AGAGG
Sbjct: 61  SLEILEEENDEELREMAKEEMNDAKSRLETIEQELKILLLPKDPNDSKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY ++ ++ K+K E + +++    G K A  +I G  AY  +K E GV
Sbjct: 121 DEAALFAYEIYRMYQKYVDQFKWKVELMSVNENGIGGFKEAVFMITGDGAYSKMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS  ++ V P   + +++EI+++D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRIPKTESGGRIHTSTVTVAVMP-EAEEVDVEINDNDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+  Q E+SQ +NKA+A+ +LR+KLY++ELQK+ +        K++IG
Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQLQNKAKAFALLRSKLYDMELQKQHD--AEAADRKSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++GDL++ + + +A  +
Sbjct: 298 TGDRSEKIRTYNF-PEGRVTDHRIKLTLYKLDQIMNGDLNELIDSLIAADQ 347


>gi|288803779|ref|ZP_06409207.1| peptide chain release factor 2, programmed [Prevotella
           melaninogenica D18]
 gi|302345945|ref|YP_003814298.1| putative peptide chain release factor 2 [Prevotella melaninogenica
           ATCC 25845]
 gi|288333766|gb|EFC72213.1| peptide chain release factor 2, programmed [Prevotella
           melaninogenica D18]
 gi|302150148|gb|ADK96410.1| putative peptide chain release factor 2 [Prevotella melaninogenica
           ATCC 25845]
          Length = 371

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 122/359 (33%), Positives = 206/359 (57%), Gaps = 12/359 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D D           +T+ P  W +   A+  M++ + ++  +    + 
Sbjct: 10  IQERTEALHRYLDIDKKRIEFEEEQLRTQAPDFWDDPARAQEQMKKVKDIEKWVKDYDKA 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +     D+    +E      ++   +E  + +++L  E D  +  ++++
Sbjct: 70  RALADEVQLAFDFYK--DELVTEEEVDTAYAKVLKVIEGLELKNMLRQEEDPMECVMKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWL 181
           +GAGGTESQDWA+ML+RMY RW E + ++    +I +G+EAGIKS T+  + G  AYG+L
Sbjct: 128 SGAGGTESQDWASMLMRMYMRWGEAQGYRVTISDIQEGDEAGIKSVTMKFEGGEYAYGYL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SP+++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ
Sbjct: 188 KSENGVHRLVRVSPFNAQGKRMTSFASVFVTPLVDDTIEVYVDPARVSWDTFRSSGAGGQ 247

Query: 242 HVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  +S VR+ +            ++++  + R Q KN+A+A  +L+++LY+  ++KR 
Sbjct: 248 NVNKVESGVRLRYQYEDPDTGEQEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRM 307

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           E     E+ K +I WG QIRSYV    + VKD RTN + +    V+DG +DDF+KA L 
Sbjct: 308 EEQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKIDDFIKAYLM 365


>gi|315651889|ref|ZP_07904892.1| peptide chain release factor RF1 [Eubacterium saburreum DSM 3986]
 gi|315485891|gb|EFU76270.1| peptide chain release factor RF1 [Eubacterium saburreum DSM 3986]
          Length = 356

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 112/350 (32%), Positives = 186/350 (53%), Gaps = 11/350 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68
           +FD  ++ V     +  +     +  +    + LM+E+  L   +    E +       D
Sbjct: 1   MFDNLEDIVVHYDEIMAELAGGDVANDQNRFRKLMKEQSDLAPLVETYGEYKKAKQLQED 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
            L +LE+  EE      +E ++  +  +   +  +   L     D  +  LE+ AGAGG 
Sbjct: 61  ALEMLEMNDEEMKEMAKEELAEGKRLEEELSDKLKILLLPKDPNDDKNIMLEIRAGAGGD 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY  +AE + +K E +++++    G K    ++ G  AY  LK E GVH
Sbjct: 121 EAALFAMQLYRMYVHYAETQNWKVEMIDVNENGIGGYKEVVAMVSGKGAYSKLKYESGVH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS +S+ V P   + ++++I  +D RID  RASG GGQ VNTTDS
Sbjct: 181 RVQRVPETESGGRIHTSTASVAVMP-EAEEVDVQIDMNDVRIDVMRASGNGGQCVNTTDS 239

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLYE+EL+K++  +      +++IG 
Sbjct: 240 AVRLTHYPTGIVIYSQTEKSQLQNKEKAFTLLRSKLYEIELEKKQ--SAEAADRRSQIGT 297

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G    +IR+Y   P   V D R N+       +++GD+ + +   +A  +
Sbjct: 298 GDRSEKIRTYNF-PQGRVTDHRINLTLYKLDKIMNGDIQELIDGCIAADQ 346


>gi|310659612|ref|YP_003937333.1| prfb [Clostridium sticklandii DSM 519]
 gi|308826390|emb|CBH22428.1| PrfB [Clostridium sticklandii]
          Length = 328

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 151/326 (46%), Positives = 217/326 (66%), Gaps = 2/326 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W  V +A+  M++ + +++ +     ++  L D  +L ELA E+        ++
Sbjct: 1   MSEPEFWNEVEKAQQTMQKNKVIEDKLEQFASLESELEDAFVLFELADEDASLEKELHSA 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            N    + +++  +  +LLSG+ D N+A + +HAG+GG ++QDW  MLLRMY R+A+   
Sbjct: 61  LNSL--EEKIDELKIATLLSGQYDMNNAIVSIHAGSGGLDAQDWTKMLLRMYDRFAQSMG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+   L++    EAGIKS TL I+G NAYG+LK E+GVHR+VRISP+D++ +RHTSF+S+
Sbjct: 119 FRVIELDMIADPEAGIKSVTLKIEGANAYGYLKSEKGVHRIVRISPFDTSGKRHTSFASV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDSIEI+I+ +D +IDTYRASGAGGQHVN T+SA+RITH+PTG+VVQCQ +RSQ
Sbjct: 179 DVIPELDDSIEIDINPADLKIDTYRASGAGGQHVNKTESAIRITHLPTGIVVQCQNQRSQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H NK  A  ML AKL EL+  + ++     +   ++I WG QIRSYV QPY MVKD RTN
Sbjct: 239 HSNKETAMKMLMAKLIELKELEHKDKIEDLQGEYSQISWGSQIRSYVFQPYTMVKDHRTN 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIKK 355
            E      V+DG++  F+ A L   +
Sbjct: 299 TEIGHVQSVMDGNIMPFINAYLKENQ 324


>gi|298346504|ref|YP_003719191.1| peptide subunit release factor RF2 [Mobiluncus curtisii ATCC 43063]
 gi|298236565|gb|ADI67697.1| peptide chain release factor RF2 [Mobiluncus curtisii ATCC 43063]
          Length = 376

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 130/357 (36%), Positives = 207/357 (57%), Gaps = 4/357 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL      +  + D +   Q+++ L  +   P LW +   A+ + +        +  +++
Sbjct: 13  KLRASFATISAVMDPELLTQKIADLTQQAAAPDLWDDQEHAQKVTQSLSAAQADLQRLQK 72

Query: 62  IQDRLCDNL---ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           ++ R+ D      L      ED  +IL +     + +K +++  + ++LL+GE D   A 
Sbjct: 73  MRARIDDMEALVELGAEESGEDRDAILVDAEQTYETLKRDLDAMEVKTLLNGEYDERFAV 132

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ D+A MLLRMY R+ E+  + T+ L+    EEAGIKS T  +  P AY
Sbjct: 133 VTIRSGAGGVDAADFAQMLLRMYLRYCERHHYATKVLDTSYAEEAGIKSVTFQVDAPYAY 192

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRL R+SP+++  +R TSF+++ V P+++ +  IE+ ESD +ID +R+SG 
Sbjct: 193 GMLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLIETTDHIEVPESDIKIDVFRSSGP 252

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVR+TH+PTG+V+  Q E+SQ +N+A A  +L+++L  L  Q+  +    
Sbjct: 253 GGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLMLRHQQEHDKKKE 312

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                 +  WG Q+RSY L   Q+VKDLRT  E  +P  V DGDLD F+ A +  +K
Sbjct: 313 LAGD-VKASWGDQMRSYFLYGQQLVKDLRTGYESGNPDSVFDGDLDGFIDAAIRWRK 368


>gi|29655248|ref|NP_820940.1| peptide chain release factor 1 [Coxiella burnetii RSA 493]
 gi|154706179|ref|YP_001425370.1| peptide chain release factor 1 [Coxiella burnetii Dugway 5J108-111]
 gi|161830069|ref|YP_001596008.1| peptide chain release factor 1 [Coxiella burnetii RSA 331]
 gi|165924041|ref|ZP_02219873.1| peptide chain release factor 1 [Coxiella burnetii RSA 334]
 gi|212219474|ref|YP_002306261.1| peptide chain release factor 1 [Coxiella burnetii CbuK_Q154]
 gi|30581025|sp|P47849|RF1_COXBU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039967|sp|A9KGY3|RF1_COXBN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039968|sp|A9N9K2|RF1_COXBR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238058710|sp|B6J625|RF1_COXB1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|29542520|gb|AAO91454.1| bacterial peptide chain release factor 1 (RF-1) [Coxiella burnetii
           RSA 493]
 gi|154355465|gb|ABS76927.1| bacterial peptide chain release factor 1 (RF-1) [Coxiella burnetii
           Dugway 5J108-111]
 gi|161761936|gb|ABX77578.1| peptide chain release factor 1 [Coxiella burnetii RSA 331]
 gi|165916526|gb|EDR35130.1| peptide chain release factor 1 [Coxiella burnetii RSA 334]
 gi|212013736|gb|ACJ21116.1| bacterial Peptide Chain Release Factor 1 (RF-1) [Coxiella burnetii
           CbuK_Q154]
          Length = 361

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 111/343 (32%), Positives = 175/343 (51%), Gaps = 9/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
                 R S +     D  +  +    + L +E   L+  +   ++ Q     +     +
Sbjct: 9   LKTLTYRYSEIGGLLSDSTVINDQDRYRELGKEYAQLEPIVKCFQQFQQNEKAIESAEEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +    E      +E      + +   +  +   +     D  + +LE+ AG GG E+  
Sbjct: 69  QQEKDPELRKLAEEELEQLTLKKEELEDQLKLLLVPKDPNDERNVFLEIRAGTGGNEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY R+AE + ++   +  H+GE  G K     + G   Y  LK E G HR+ R
Sbjct: 129 FAGDLFRMYARYAETKGWRVNIVSAHEGEHGGFKEVIARVIGEGVYSQLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ + P VD+  +I+I+ ++ RIDT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPVTESQGRIHTSACTVAIMPEVDEIDQIKINPAELRIDTFRASGAGGQHVNRTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTGVVV+CQ ERSQHKNKA+A ++L++KL   E  K+++        K+ +G G   
Sbjct: 249 THLPTGVVVECQDERSQHKNKARAMSLLQSKLLAAERAKQDQEQ--AAKRKSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+      +V++GDLD  +   + 
Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYQLDEVIEGDLDPVIGPLIR 348


>gi|269976501|ref|ZP_06183486.1| peptide chain release factor 2 [Mobiluncus mulieris 28-1]
 gi|269935302|gb|EEZ91851.1| peptide chain release factor 2 [Mobiluncus mulieris 28-1]
          Length = 378

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 129/362 (35%), Positives = 206/362 (56%), Gaps = 9/362 (2%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL    + +  + D     ++++ L  +   P LW +   A+ + +      + +  ++ 
Sbjct: 12  KLQATFDTVEAVMDPALLQKKIADLTAQASAPDLWDDQENAQKITQTLSATQSDLERLQT 71

Query: 62  IQDRLCDN--------LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113
           ++ RL D           L+      D  +I+++     + +  ++   +  +LL+GE D
Sbjct: 72  MKTRLEDFAALVELGGEELMSEDGRADGQAIMEDAEATYKTLAADLAALEVRTLLNGEYD 131

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
              A + + +GAGG ++ D+A MLLRMY RWAE+  + T+ ++    EEAGIKSAT  I 
Sbjct: 132 ERFAVVTIRSGAGGVDAADFAQMLLRMYLRWAERHGYPTKVMDTSYAEEAGIKSATFEID 191

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
            P AYG L  E G HRL R+SP+++  +R TSF+++ V P+++ +  I++ ESD +ID +
Sbjct: 192 APYAYGRLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLIETTDHIDVPESDIKIDVF 251

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R+SG GGQ VNTTDSAVR+TH+PTG+V+  Q E+SQ +N+A A  +L+++L  L  Q+  
Sbjct: 252 RSSGPGGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLLLRHQQEH 311

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           E          +  WG Q+RSY L   Q+VKDLRT  E  +P  V DGDLD F+   +  
Sbjct: 312 EKKKELAGD-VKASWGDQMRSYFLYGQQLVKDLRTGHESNNPDAVFDGDLDTFIDEGIRW 370

Query: 354 KK 355
           +K
Sbjct: 371 RK 372


>gi|115524982|ref|YP_781893.1| peptide chain release factor 2 [Rhodopseudomonas palustris BisA53]
 gi|115518929|gb|ABJ06913.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodopseudomonas
           palustris BisA53]
          Length = 322

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 201/309 (65%), Positives = 252/309 (81%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L++++  I +++  L DN+ ++EL   E D S++ E    L+++K +V  ++ E
Sbjct: 1   MQERTSLEDSLDGIGKVERELDDNVGMIELGEAEGDDSVVAEAEAALKKLKKDVARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D+YLEVHAGAGGTESQDWA+MLLRMYTRWAEK  FK E LE  +GEEAGI
Sbjct: 61  ALLSGEADRFDSYLEVHAGAGGTESQDWASMLLRMYTRWAEKHGFKIEYLEETEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISPYDSN+RRHTSFSS+ ++PVVD+SI+I+I+E
Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPYDSNARRHTSFSSVQIFPVVDNSIKIDIAE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R+DT R+ GAGGQHVN T+SAVR+TH+PTGV V CQ  RSQHKNKAQAW+MLRA+LY
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHVPTGVAVVCQAGRSQHKNKAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ +  + VLDGDLD+
Sbjct: 241 EIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300

Query: 346 FMKATLAIK 354
           FM ATLA +
Sbjct: 301 FMAATLAQR 309


>gi|295697770|ref|YP_003591008.1| peptide chain release factor 1 [Bacillus tusciae DSM 2912]
 gi|295413372|gb|ADG07864.1| peptide chain release factor 1 [Bacillus tusciae DSM 2912]
          Length = 355

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 110/347 (31%), Positives = 178/347 (51%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +R   L  +  DP +  +  + +   +E+  L+  +   +E +  +       E+
Sbjct: 5   LQAIEERYEDLGRRLCDPDVLADPEKLRTYSKEQADLEETVQTYREYKQVVSALREAKEM 64

Query: 76  ALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E  D  + +     +     R +      Q   L     D  +  +E+   AGG E+ 
Sbjct: 65  FEERLDEEMREWVKSEIAALGHRREELEAKLQILLLPRDPNDDKNVIVEIRGAAGGEEAS 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE++ ++ E ++ H  +  G K     ++G  AY  LK E G HR+ 
Sbjct: 125 LFAADLFRMYTRYAERQGWRVEMIDSHPTDLGGFKEVVFSVQGRGAYSRLKFESGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++       + +E+EI E D RIDT+ ++G GGQ VNTT SAVR
Sbjct: 185 RVPTTESGGRIHTSTATVA-VMPEVEEVEVEIHEKDLRIDTFCSTGPGGQSVNTTQSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ E+SQ KN+ +A  +LRA+LYE   ++++E   + ++ K+ +G G  
Sbjct: 244 ITHLPTGIVVSCQDEKSQLKNREKAMRVLRARLYEKYRREQQEE--LAQTRKSLVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       VLDGDLD+ + A +A  +
Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTLHRLDAVLDGDLDEIIHALIAADR 347


>gi|254374925|ref|ZP_04990406.1| peptide chain release factor 1 [Francisella novicida GA99-3548]
 gi|151572644|gb|EDN38298.1| peptide chain release factor 1 [Francisella novicida GA99-3548]
          Length = 361

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 186/346 (53%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   ++    +  +  +  + + L +E  HL+  +   KE    L D     E+
Sbjct: 9   LQSLIERHEEVSALLSEVGIISDQNKFRDLSKEYSHLEPIVKAFKEYTQALEDKQAAYEM 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D   +     +     + I+      Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LNEKDAELVEMAKEELKLANEAIEKLESELQILLLPRDPNDDANVFLEIRAGTGGDEASI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L +MY+++AE+R +K E +   +GE  G K     I G   Y  LK E G HR+ R
Sbjct: 129 FSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   I+I+ +D ++DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++     ++ K+ +G G   
Sbjct: 249 THIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQ--SDTRKSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+      +V++G LD  ++  +   +
Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQ 351


>gi|623028|emb|CAA55563.1| unnamed protein product [Coxiella burnetii]
          Length = 361

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 111/343 (32%), Positives = 174/343 (50%), Gaps = 9/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
                 R S +     D  +  +    + L +E   L+  +   ++ Q     +     +
Sbjct: 9   LKTLTYRYSEIGGLLSDSTVINDQDRYRELGKEYAQLEPIVKCFQQFQQNEKAIESAEEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +    E      +E      + +   +      +     D  + +LE+ AG GG E+  
Sbjct: 69  QQEKDPELRKLAEEELEQLTLKKEELEDQLNLLLVPKDPNDERNVFLEIRAGTGGNEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY R+AE + ++   +  H+GE  G K     + G   Y  LK E G HR+ R
Sbjct: 129 FAGDLFRMYARYAETKGWRVNIVSAHEGEHGGFKEVIARVIGEGVYSQLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ + P VD+  +I+I+ ++ RIDT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPVTESQGRIHTSACTVAIMPEVDEIDQIKINPAELRIDTFRASGAGGQHVNRTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTGVVV+CQ ERSQHKNKA+A ++L++KL   E  K+++        K+ +G G   
Sbjct: 249 THLPTGVVVECQDERSQHKNKARAMSLLQSKLLAAERAKQDQEQ--AAKRKSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+      +V++GDLD  +   + 
Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYQLDEVIEGDLDPVIGPLIR 348


>gi|289523200|ref|ZP_06440054.1| peptide chain release factor 1 [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503743|gb|EFD24907.1| peptide chain release factor 1 [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 358

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 121/346 (34%), Positives = 188/346 (54%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+  ++   L TK  DP +  N    + L +E   +   +   +E +         L L
Sbjct: 8   LDDLERKYQELETKLSDPDVISNPAVLQRLAKEHSEMSKVVEKYREYRQAQKRLEEALAL 67

Query: 76  ALEEDDCSILQETSDNLQ---RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D+        +  Q    ++   E      L     D     +E+ AGAGG E+  
Sbjct: 68  TEEDDEDLRELAREEANQLKNIVEELEEELALLLLPKDPNDERSVIVEIRAGAGGEEAAL 127

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY R+AE++++K E L  ++    G K     ++G +AY  LK E GVHR+ R
Sbjct: 128 FAADLYRMYVRYAERKRWKVELLTANETGIGGYKEIVFRVEGQDAYSVLKYESGVHRVQR 187

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +++ R HTS +++ V P   D +++EI   D +IDT+RASGAGGQ+VN TDSAVRI
Sbjct: 188 VPVTEASGRIHTSTATVAVLP-EPDEVDVEIRPEDLKIDTFRASGAGGQYVNMTDSAVRI 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV CQ ERSQ KN+A+A  +LRAKLY++E+++++E   +    + +IG G   
Sbjct: 247 THIPTGIVVTCQDERSQLKNRAKAMQLLRAKLYDMEIRRQQE--AMASERRGQIGSGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +   +  ++L+GDLD+ + A     +
Sbjct: 305 ERIRTYNF-PQNRVTDHRIGLTLHNLDEILEGDLDELLYALATADQ 349


>gi|309973234|gb|ADO96435.1| Peptide chain release factor 1 [Haemophilus influenzae R2846]
          Length = 361

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 110/344 (31%), Positives = 181/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     D  +  +  + +   +E   L+  +           +      L
Sbjct: 10  LESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQNIEEAEIL 69

Query: 76  ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q   +  +  I+   +  Q   L     D  + YLE+ AG GG E+  +A
Sbjct: 70  LDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 129

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG LK E G HR+ R+ 
Sbjct: 130 GDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVTGEGVYGQLKFESGGHRVQRVP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 190 KTESQGRIHTSACTVAVMPKLPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 249

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++       +  +  +G G +   
Sbjct: 250 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQ--TDMRRNLLGSGDRSDK 307

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      ++++G +D+ ++  +   +
Sbjct: 308 IRTYNY-PQGRVTDHRINLTIYRLDEIMNGKIDELIQPIITEYQ 350


>gi|315657060|ref|ZP_07909945.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|315492452|gb|EFU82058.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 376

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 130/357 (36%), Positives = 207/357 (57%), Gaps = 4/357 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL      +  + D +   Q+++ L  +   P LW +   A+ + +        +  +++
Sbjct: 13  KLRASFATISAVMDPELLTQKIADLTQQAAAPDLWDDQEHAQKVTQSLSAAQADMQRLQK 72

Query: 62  IQDRLCDNL---ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           ++ R+ D      L      ED  +IL +     + +K +++  + ++LL+GE D   A 
Sbjct: 73  MRARIDDMEALVELGAEESGEDRDAILADAEQTYETLKQDLDAMEVKTLLNGEYDERFAV 132

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ D+A MLLRMY R+ E+  + T+ L+    EEAGIKS T  +  P AY
Sbjct: 133 VTIRSGAGGVDAADFAQMLLRMYLRYCERHHYATKVLDTSYAEEAGIKSVTFQVDAPYAY 192

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRL R+SP+++  +R TSF+++ V P+++ +  IE+ ESD +ID +R+SG 
Sbjct: 193 GMLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLIETTDHIEVPESDIKIDVFRSSGP 252

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVR+TH+PTG+V+  Q E+SQ +N+A A  +L+++L  L  Q+  +    
Sbjct: 253 GGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLMLRHQQEHDKKKE 312

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                 +  WG Q+RSY L   Q+VKDLRT  E  +P  V DGDLD F+ A +  +K
Sbjct: 313 LAGD-VKASWGDQMRSYFLYGQQLVKDLRTGYESGNPDSVFDGDLDGFIDAAIRWRK 368


>gi|255530197|ref|YP_003090569.1| hypothetical protein Phep_0282 [Pedobacter heparinus DSM 2366]
 gi|255343181|gb|ACU02507.1| hypothetical protein Phep_0282 [Pedobacter heparinus DSM 2366]
          Length = 357

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 144/350 (41%), Positives = 216/350 (61%), Gaps = 3/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  L    D +N ++ +      T  P+ W +  +A+  + E           ++ 
Sbjct: 9   LRDRVASLRRYLDVENRLEDIRIEQELTLQPNFWDDPKKAEQHIAEINSKKVWTDAWQQA 68

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              L D L+L +     D      +   +       +E  + +++L  + D   A +++ 
Sbjct: 69  NSLLEDTLVLFDFLQSGDATEEEMQEQYDA--CLKAIEDLELKNMLKSKEDQLPAVMQIT 126

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA ML+RMY  W EK  +K    +  +GE AG+KS TL   G  AYG+LK
Sbjct: 127 AGAGGTESCDWAYMLMRMYMMWGEKNGYKITEQDYQEGEIAGVKSVTLQFSGDFAYGYLK 186

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVRISP+DSN+RRHTSF+S++VYP+VDD+IEIE+ +S+   +T+R+ GAGGQ+
Sbjct: 187 GENGVHRLVRISPFDSNARRHTSFASVYVYPLVDDTIEIEVKDSEIEFETFRSGGAGGQN 246

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++AVR+ H P+G++++ Q+ RSQ +NK  A  +L+++LYE E++KR E   + E +
Sbjct: 247 VNKVETAVRLYHKPSGIIIKNQESRSQLQNKENAIRLLKSQLYEAEMRKRMEATALIEGN 306

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K +I WG QIRSYVL   + VKD RTN + ++P  VLDG+L+DF+KA L 
Sbjct: 307 KKKIEWGSQIRSYVLDD-RRVKDHRTNFQSSNPQAVLDGELNDFLKAYLM 355


>gi|56707338|ref|YP_169234.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110669808|ref|YP_666365.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis FSC198]
 gi|224456401|ref|ZP_03664874.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254370015|ref|ZP_04986022.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254874173|ref|ZP_05246883.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|61214577|sp|Q5NIA8|RF1_FRATT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361541|sp|Q14JR1|RF1_FRAT1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|54112995|gb|AAV29131.1| NT02FT0305 [synthetic construct]
 gi|56603830|emb|CAG44801.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320141|emb|CAL08184.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis FSC198]
 gi|151568260|gb|EDN33914.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840172|gb|EET18608.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282158463|gb|ADA77854.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 361

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 114/346 (32%), Positives = 186/346 (53%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   ++    +  +  +  + + L +E  HL+  +   K+    L D     E+
Sbjct: 9   LQSLIERHEEVSALLSEAGIISDQNKFRDLSKEYSHLEPIVKAFKKYTQALEDKQAAYEM 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D   +     +     + I+      Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LNEKDAELVEMAKEELKLANEAIEKLESELQIFLLPRDPNDDANVFLEIRAGTGGDEASI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L +MY+++AE+R +K E +   +GE  G K     I G   Y  LK E G HR+ R
Sbjct: 129 FSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   I+I+ +D ++DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++     ++ K+ +G G   
Sbjct: 249 THIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQ--SDTRKSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+      +V++G LD  ++  +   +
Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLVLEHQ 351


>gi|283778052|ref|YP_003368807.1| peptide chain release factor 2 [Pirellula staleyi DSM 6068]
 gi|283436505|gb|ADB14947.1| bacterial peptide chain release factor 2 (bRF- 2) [Pirellula
           staleyi DSM 6068]
          Length = 398

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 141/353 (39%), Positives = 218/353 (61%), Gaps = 2/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+ ++++ L G  D+D   ++  FL  +   P  W    +A  ++ + + L   ++ +  
Sbjct: 33  KIQQRVDQLRGSLDYDGKKKQFEFLEARMSQPDFWNVQEKALEVVSQVKSLKAILAPLDA 92

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I +   D   +L++A +++  +           I+ +++  + ++LL+G  D+  A + +
Sbjct: 93  IVNSASDLPGMLDMAGDDESFAADLRAEIER--IEKQLDDLELKALLNGPLDNVGAIVTI 150

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           HA  GGT++ DWA MLLRMY  WA+K  ++ +  E  + + AGI +ATL+I+GP AYG+L
Sbjct: 151 HARDGGTDASDWAEMLLRMYIGWAQKNGYEYKVTERDEADVAGISAATLVIRGPMAYGYL 210

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE G HRLVRISP++S  +R TSF+++ V P + D  E+ I++ D R DTYRA GAGGQ
Sbjct: 211 KGESGHHRLVRISPFNSEGKRQTSFAAVDVLPEIADDFEVVINKEDIREDTYRAGGAGGQ 270

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVR+TH P+G+VVQCQ ERSQH N+A A+ MLRA+L   E ++RE  +     
Sbjct: 271 HVNKTESAVRLTHFPSGIVVQCQNERSQHSNRATAYKMLRARLARAEEERREAESASKYK 330

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           S  ++G+G QIR+Y L P Q VKD RT   +     VLDG+L  F+ + L  +
Sbjct: 331 SAAKVGFGSQIRNYFLHPTQRVKDSRTGYSEGDFHSVLDGNLQGFIDSVLKWR 383


>gi|315186593|gb|EFU20352.1| bacterial peptide chain release factor 1 (bRF-1) [Spirochaeta
           thermophila DSM 6578]
          Length = 357

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 116/342 (33%), Positives = 178/342 (52%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   L T   DP ++ +    + L +E  HL   +   +  +           +
Sbjct: 7   IEELTTRFKELETALADPSVFNDQKRYRELAQEHAHLSQVVRTAEHYRRLEARLEEAKTV 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EEDD  + +   + ++ ++ E+   +       +     D  +  LE+ AG GG E+ 
Sbjct: 67  LEEEDDHELKEMAREEIKALEGEIARTEQRLKLLLVPPDPLDGKNIILEIRAGTGGEEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE++ +K E +E  + E  G +     I G   YG L+ E G HR+ 
Sbjct: 127 LFAADLYRMYARYAERKGWKMEIMEASETELGGFRELVCAISGKEVYGHLRFESGGHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS  ++ V P  +++    I   D R+D +R+SG GGQ VNTTDSAVR
Sbjct: 187 RIPVTESGGRIHTSAVTVAVLPEPEETEVE-IRPEDIRVDVFRSSGPGGQSVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ E+SQHKNKA+A  +LRA+LY  E++K+ + +      +++IG G  
Sbjct: 246 ITHLPTGLVVSCQDEKSQHKNKAKALKILRARLY--EMEKQRQESERAAMRRSQIGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   V D R N+       V+DGDLD+ + A 
Sbjct: 304 SERIRTYNF-PQNRVTDHRINLTLYKLEAVMDGDLDEIIDAL 344


>gi|319898909|ref|YP_004159002.1| peptide chain release factor RF-2 [Bartonella clarridgeiae 73]
 gi|319402873|emb|CBI76424.1| peptide chain release factor RF-2 [Bartonella clarridgeiae 73]
          Length = 333

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 213/320 (66%), Positives = 263/320 (82%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           LW N  +A+ +MRERQ+L+N+++  +     L + + L+ +  EE+D  I+ E  + + +
Sbjct: 2   LWNNAQKAQDVMRERQNLENSMNSTQLFTQTLEECIELIAMGEEENDMGIIAEAENTILQ 61

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +K E++ ++ E LLSGEADSND YLE+HAGAGG ESQDWA+MLLRMY+RWAE+ K K E 
Sbjct: 62  LKKEIDKRRIEMLLSGEADSNDTYLEIHAGAGGIESQDWASMLLRMYSRWAEQNKMKVEV 121

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           LE HDGEEAGIKSATLLIKG NAYG LK E GVHRLVRISPYDSN+RRHTSF+SIW+YPV
Sbjct: 122 LETHDGEEAGIKSATLLIKGHNAYGLLKTESGVHRLVRISPYDSNARRHTSFASIWIYPV 181

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           V+++IE+++S++D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A
Sbjct: 182 VNENIEVDLSDADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRA 241

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            AW+MLRA+LYE EL+KREE  N  E+SKTEIGWG QIRSYVLQPYQ+VKDLRT +E T 
Sbjct: 242 TAWSMLRARLYEEELKKREEETNAVEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTD 301

Query: 335 PSDVLDGDLDDFMKATLAIK 354
           P  VL+GDLD F++A LA +
Sbjct: 302 PQTVLNGDLDIFIEAALAQR 321


>gi|302820696|ref|XP_002992014.1| hypothetical protein SELMODRAFT_134701 [Selaginella moellendorffii]
 gi|300140136|gb|EFJ06863.1| hypothetical protein SELMODRAFT_134701 [Selaginella moellendorffii]
          Length = 382

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 136/356 (38%), Positives = 208/356 (58%), Gaps = 3/356 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++ ++  L    D +     L+ L  +  DP  W+   +A+ ++ E   + + ++  K  
Sbjct: 19  VAARVRQLLDSADLEQQEAVLADLENQASDPAFWEERSKAQKILSELNEIKDRVNLYKTF 78

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQ--RIKLEVEYKQFESLLSGEADSNDAYLE 120
           + ++ D   ++EL  E +      +         I   ++  +   LLSG  D   A + 
Sbjct: 79  RAKVDDAQCIVELLEEMESPDAALKLEAAETVSWITAAMDRFELNKLLSGTYDKEGARIT 138

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + AGAGGT++QDWA MLLRMY RWA +  FK+  +E   GEEAGIKSATL I G  AYG+
Sbjct: 139 ITAGAGGTDAQDWAEMLLRMYQRWATRSGFKSTVVESSPGEEAGIKSATLEIDGRYAYGY 198

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAG 239
           + GE+G HRLVR SP++S   R TSF+ + V P+  +  IE+EI E D  I T R+ G G
Sbjct: 199 ISGEKGTHRLVRQSPFNSKGLRQTSFAGVEVMPLLEESEIEVEIPEGDLEITTCRSGGKG 258

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ+VN  ++AVR+THIPTG+ ++C +ERSQ +NK +A  +L++KL  +   +R       
Sbjct: 259 GQNVNKVETAVRVTHIPTGIALRCSEERSQLQNKIKAIALLKSKLLVILEDQRAAEIKEI 318

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                +  WG+QIR+YV  PY++VKDLRTN+E +  S ++DG+L+  + A L  K+
Sbjct: 319 RGDVVKAEWGQQIRNYVFHPYKLVKDLRTNVETSDISGIMDGNLEPLLTAYLMSKQ 374


>gi|123967735|ref|YP_001008593.1| peptide chain release factor 2 [Prochlorococcus marinus str.
           AS9601]
 gi|123197845|gb|ABM69486.1| peptide chain release factor RF-2 [Prochlorococcus marinus str.
           AS9601]
          Length = 354

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 140/344 (40%), Positives = 204/344 (59%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L  +FD      +   L   +  P  W N  EAK  M     +   +  + + +  + D 
Sbjct: 2   LRIVFDVPRLKAKRKELEQISAQPEFWDNQEEAKKQMLILDDVKAQLELLDKWKTFISDA 61

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              LEL   E +  ++ E+   L++++  ++  +FE LL GE D   A + ++AGAGGT+
Sbjct: 62  NASLELYSLEPEEEMILESQLGLKKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGGTD 121

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW  +LLRMY+RWA+  +      E+  GEEAGIKS T  I+G  AYG+L+ E+G HR
Sbjct: 122 AQDWVEILLRMYSRWADNNQMSLVINELSQGEEAGIKSVTFEIEGKYAYGYLQHEKGTHR 181

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+++N +R TSF+ + V P +DD+I ++I E D  I T R+ GAGGQ+VN  ++A
Sbjct: 182 LVRISPFNANGKRQTSFAGVEVMPKLDDNISLDIPEKDLEITTSRSGGAGGQNVNKVETA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRI H+P+G+ V+C QERSQ +NK +A  +L++KL  +  ++R       +    E  WG
Sbjct: 242 VRIVHLPSGISVRCTQERSQLQNKEKAMLLLKSKLLVIAKEQRAAEVADIKGDIVEAAWG 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIR+YV  PYQMVKDLRT  E      VLDG LD F+   L +
Sbjct: 302 NQIRNYVFHPYQMVKDLRTMQETNELDSVLDGGLDPFIHELLRM 345


>gi|295094043|emb|CBK83134.1| bacterial peptide chain release factor 1 (bRF-1) [Coprococcus sp.
           ART55/1]
          Length = 358

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 120/351 (34%), Positives = 195/351 (55%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +  V +L  +N +  DP +  +  + + LM+E+  L   +    E +D       
Sbjct: 1   MFDRLEELVDKLDTINNQLTDPDVVSDQNKFRKLMKEQSDLSPIVEKYHEYKDAKTTIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            LE+  EE D  + +   + +   K  +E  +       L     DS +  +E+ AGAGG
Sbjct: 61  SLEILEEESDEELREMAKEEMNEAKANLETIEQELKILLLPKDPNDSKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY ++ ++ K+K E + +++    G K A  +I G  AY  +K E GV
Sbjct: 121 DEAALFAYEVYRMYQKYVDQFKWKVELMSVNENGIGGFKEAVFMITGDGAYSKMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS  ++ V P   + +++EI+E+D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRIPKTESGGRIHTSTITVAVMP-EAEEVDVEINENDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+  Q E+SQ +NKA+A+ +LR+KLY++ELQK+ +        +++IG
Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQLQNKAKAFALLRSKLYDMELQKQHD--AEAADRRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++GDL++ + + +A  +
Sbjct: 298 TGDRSEKIRTYNF-PEGRVTDHRIKLTLYKLDQIMNGDLNELIDSLIAADQ 347


>gi|257063623|ref|YP_003143295.1| peptide chain release factor 2 [Slackia heliotrinireducens DSM
           20476]
 gi|256791276|gb|ACV21946.1| peptide chain release factor 2 [Slackia heliotrinireducens DSM
           20476]
          Length = 369

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 141/353 (39%), Positives = 210/353 (59%), Gaps = 2/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+ ++         +     L  LN +   P  W +   A  + +    + + +   + 
Sbjct: 13  ELAERVAAAREYRHINENESLLEKLNEEIASPDFWNDSQNALQVSKRASEVRSILDEYEH 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D     EL+ +++  +  ++         L+    +  S  SGE D  DA + +
Sbjct: 73  VASLLEDARTADELSADDEMFAEERDELRRQLSDLLDGL--EVSSWFSGEMDPCDAIVSI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           + G GG E+QDW +ML +MY+++AEK+ +K   L+I  GE  G+  A + I+G NAYG L
Sbjct: 131 NPGQGGLEAQDWVDMLYKMYSKYAEKKGWKVRLLDITPGEVIGLDRAVIQIEGKNAYGML 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVRISP D   RR T+F+ + V PVVDD IE++++ +D R+D YR+SG GGQ
Sbjct: 191 RSENGVHRLVRISPTDDKKRRQTTFAGVEVLPVVDDEIEVDLNVNDVRVDVYRSSGPGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPTG+VV CQ ++SQ +NK  A+ +LRAKLYELE QKREE  +    
Sbjct: 251 CVNTTDSAVRLTHIPTGIVVTCQNQKSQLQNKDAAFKVLRAKLYELERQKREEEIDALRG 310

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + +  +G QIR+YVL PYQ+VKDLR+ IE  +   VL GD+++F+      +
Sbjct: 311 ERMDNSFGSQIRNYVLYPYQLVKDLRSGIETGNVDAVLSGDIEEFVIGYHRWR 363


>gi|282853672|ref|ZP_06263009.1| peptide chain release factor 2 [Propionibacterium acnes J139]
 gi|282583125|gb|EFB88505.1| peptide chain release factor 2 [Propionibacterium acnes J139]
 gi|314983205|gb|EFT27297.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA3]
 gi|315092426|gb|EFT64402.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA4]
          Length = 368

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 221/353 (62%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D +     ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 13  LDASLSSIENVLDPEAKKAEIADLEKQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A  +DD   L E +    +++ E++  +  +LLSG+ D  +A + + 
Sbjct: 73  RARIEDVHVLLEFAAADDDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RW+E+  +K E L+    EEAGIKSAT ++  P AYG L 
Sbjct: 133 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL E   +++E   N  +S 
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSE 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRTN E  +   V DGD+DDF+ A +  ++
Sbjct: 313 GN--SWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 363


>gi|325268643|ref|ZP_08135273.1| peptide chain release factor RF2 [Prevotella multiformis DSM 16608]
 gi|324989171|gb|EGC21124.1| peptide chain release factor RF2 [Prevotella multiformis DSM 16608]
          Length = 371

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 124/359 (34%), Positives = 204/359 (56%), Gaps = 12/359 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  + + L    D D           +T+ P  W +   A+  M++ + ++  I    E 
Sbjct: 10  IQVRTDALHRYLDIDRKRIEFEEEQLRTQAPDFWDDPKRAQEQMKKVKEIEKWIKGYDEA 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +     D+    +E      +    +E  + +++L  E D  +  ++++
Sbjct: 70  RSLTDEAQLAFDFYK--DELVTEEEVDTAYDKAFKVIEDLELKNMLRQEEDPMECVMKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWL 181
           +GAGGTESQDWA+ML+RMY RW E   +K    +I +G+EAGIKS T+  + G  AYG+L
Sbjct: 128 SGAGGTESQDWASMLMRMYMRWGEAHGYKVTVSDIQEGDEAGIKSVTMKFEGGEYAYGYL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SP+++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ
Sbjct: 188 KSENGVHRLVRVSPFNAQGKRMTSFASVFVTPLVDDTIEVYVDPARVSWDTFRSSGAGGQ 247

Query: 242 HVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  +S VR+ +            ++++  + R Q KN+A+A  +L+++LY+  ++KR 
Sbjct: 248 NVNKVESGVRLRYQYEDPDTGEQEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRM 307

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           E     E+ K +I WG QIRSYV    + VKD RTN + +    V+DG +D F+KA L 
Sbjct: 308 EEQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKIDAFIKAYLM 365


>gi|238759279|ref|ZP_04620445.1| Peptide chain release factor 2 [Yersinia aldovae ATCC 35236]
 gi|238702440|gb|EEP94991.1| Peptide chain release factor 2 [Yersinia aldovae ATCC 35236]
          Length = 310

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 171/308 (55%), Positives = 217/308 (70%), Gaps = 1/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
            +ER  L+  +S I ++   + D   LLELA+E DD     E    L  +  ++   +F 
Sbjct: 2   GKERSALEEIVSTIDQLDQGMEDVSGLLELAIEADDEETFNEAVAELDTLDGKLGQLEFR 61

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            + SGE DS + YL++ AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  DG+ AG+
Sbjct: 62  RMFSGEYDSANCYLDLQAGSGGTEAQDWASMLLRMYLRWAEARGFKTEIIEESDGDVAGL 121

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ 
Sbjct: 122 KSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINP 181

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID YRASGAGGQHVN T+SAVRITH+PT +V QCQ +RSQHKNK QA   L+AKLY
Sbjct: 182 ADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVTQCQNDRSQHKNKDQAMKQLKAKLY 241

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E E+QK+     + E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD 
Sbjct: 242 EFEMQKKNADKQVLEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDK 300

Query: 346 FMKATLAI 353
           F++A+L  
Sbjct: 301 FIEASLKA 308


>gi|332532477|ref|ZP_08408355.1| peptide chain release factor 1 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332038120|gb|EGI74567.1| peptide chain release factor 1 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 361

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 117/346 (33%), Positives = 185/346 (53%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72
            +  V+R   +     DP +  +    + L +E   L+  +      ++   D      +
Sbjct: 9   LETLVERYEEVQALLSDPSVISDQNRFRALSKEYSELEEIVKTFLNYKETQDDLASAEEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L+ +  E      +E  +   +I +  +  Q   L     D+N+ ++EV AG GG E+  
Sbjct: 69  LKDSDPEMREMAQEEYKEAKAQILVIEDQIQVLMLPKDPRDNNNVFVEVRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE +K+K E +  ++GE  G K     I G   YG LK E GVHR+ R
Sbjct: 129 FAGDLFRMYSRYAENKKWKVEVVSTNEGEHGGYKEVIANISGEGVYGQLKFESGVHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   V ++  I+I+ +D ++DT+RASGAGGQHVN TDSA+R+
Sbjct: 189 VPETESQGRVHTSACTVAVMAEVPEAEAIQINTADLKVDTFRASGAGGQHVNKTDSAIRL 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTGVVV+CQ +RSQHKN+A+A ++L A+L + E +KR   A      +  +G G   
Sbjct: 249 THIPTGVVVECQDQRSQHKNRAKAMSVLAARLQQAEDEKR--HAAEASERRDLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N+     ++V+ GDL   +   +   +
Sbjct: 307 ERIRTYNY-PQGRITDHRINLTLYRLNEVVAGDLSAIIDPLMQEHQ 351


>gi|297805172|ref|XP_002870470.1| HCF109 [Arabidopsis lyrata subsp. lyrata]
 gi|297316306|gb|EFH46729.1| HCF109 [Arabidopsis lyrata subsp. lyrata]
          Length = 453

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 140/358 (39%), Positives = 212/358 (59%), Gaps = 4/358 (1%)

Query: 1   MKL-SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
           +++ S ++  +      +   Q ++ L +K  D   W +  +A+  +     L + +  +
Sbjct: 85  VEIASARVEEIRASAGLEQLEQEIANLESKATDTSFWDDRTKAQETLSALNDLKDRMRLL 144

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSNDA 117
            E +  + D   +++L  E D   +           +    ++  +   LLSG  D   A
Sbjct: 145 SEFKTMVEDAETIVKLTEEMDSTDVSLLEEAMGIIKELNKSLDRFELTQLLSGPYDKEGA 204

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            + + AGAGGT++QDWA+MLLRMY RW EK+++KT+ +E+ +GEEAGIKSATL I+G  A
Sbjct: 205 VVYITAGAGGTDAQDWADMLLRMYMRWGEKQRYKTKVVEMSNGEEAGIKSATLEIEGRYA 264

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRAS 236
           YG++ GE+G HR+VR SP++S   R TSFS + V P+  ++++ IEI E D  I   RA 
Sbjct: 265 YGYISGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAG 324

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ+VN  ++AVRITHIPTGV V+C +ERSQ  NK +A   L+AKL  +  ++R    
Sbjct: 325 GKGGQNVNKVETAVRITHIPTGVAVRCTEERSQLANKTRALIRLKAKLLVIAEEQRATEI 384

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                   +  WG+QIR+YV  PY++VKD+RT  E +  + V+DGDLD F+KA L  K
Sbjct: 385 KEIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDITSVMDGDLDPFIKAYLKHK 442


>gi|300869767|ref|YP_003784638.1| peptide chain release factor RF-2 [Brachyspira pilosicoli 95/1000]
 gi|300687466|gb|ADK30137.1| peptide chain release factor RF-2 [Brachyspira pilosicoli 95/1000]
          Length = 312

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 156/309 (50%), Positives = 213/309 (68%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L + I  I+ +     +   L+E+A+E +D  + +E       ++      + +
Sbjct: 1   MKERMLLLDKIEPIENLIKNANNIYELVEMAIESNDTEMEKELETECIELQKVFNELETK 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +L SGE DS +AYL ++AGAGGTES DWA+ML RMY R+ E+  F  E  +   G+EAGI
Sbjct: 61  NLFSGEFDSKNAYLTLNAGAGGTESCDWASMLSRMYVRFCERHGFTVETTDELPGDEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K  +  ++G  AYG+L+ E GVHRLVRISP+D+N++RHTSF ++ V P +D+ IE+EI++
Sbjct: 121 KQISFYVQGLYAYGYLRSEIGVHRLVRISPFDANAKRHTSFVAVSVMPDIDEDIEVEINQ 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTYRASGAGGQHVN T SA+RITHIPT +VVQCQ ERSQH NK  A  ML+AKLY
Sbjct: 181 ADLRIDTYRASGAGGQHVNKTSSAIRITHIPTNIVVQCQAERSQHNNKDMAMKMLKAKLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           +LE +K ++        KT+I WG QIRSYV QPYQMVKDLRT  E  + + V+DG++D+
Sbjct: 241 QLEKEKLDKEKQKIAGEKTDIAWGNQIRSYVFQPYQMVKDLRTGHETGNMNSVMDGNIDE 300

Query: 346 FMKATLAIK 354
           F+ A L  +
Sbjct: 301 FISAYLKQQ 309


>gi|260593398|ref|ZP_05858856.1| peptide chain release factor 2, programmed [Prevotella veroralis
           F0319]
 gi|260534674|gb|EEX17291.1| peptide chain release factor 2, programmed [Prevotella veroralis
           F0319]
          Length = 372

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 124/359 (34%), Positives = 205/359 (57%), Gaps = 12/359 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++ + + L      D           +T+ P  W +   A+  M++ + ++  I    E 
Sbjct: 10  ITERTDALHRYLGIDEKRIEFEEEQLRTQAPDFWDDPKRAQEQMKKVKDIEKWIKGYDEA 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +     D+    +E      +    +E  + +++L  E D  +  ++++
Sbjct: 70  RSLTDEVQLAFDFYK--DNLVTEEEVDTAYNKALKAIEDLELKNMLRQEEDPMECVMKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWL 181
           +GAGGTESQDWA+ML+RMY RW E   +K    +I +G+EAGIKS T+  + G  AYG+L
Sbjct: 128 SGAGGTESQDWASMLMRMYMRWGEAHGYKVTISDIQEGDEAGIKSVTMKFEGGEYAYGYL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SP+++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ
Sbjct: 188 KSENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDTIEVYVDPARVSWDTFRSSGAGGQ 247

Query: 242 HVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  +S VR+ +            ++++  + R Q KN+A+A  +L+++LY+  ++KR 
Sbjct: 248 NVNKVESGVRLRYQYEDPDTGEQEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRM 307

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           E     E+ K +I WG QIRSYV    + VKD RTN + +    V+DG +DDF+KA L 
Sbjct: 308 EEQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKIDDFIKAYLM 365


>gi|210608516|ref|ZP_03287892.1| hypothetical protein CLONEX_00071 [Clostridium nexile DSM 1787]
 gi|210153007|gb|EEA84013.1| hypothetical protein CLONEX_00071 [Clostridium nexile DSM 1787]
          Length = 358

 Score =  237 bits (603), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 116/351 (33%), Positives = 186/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D+ + R   L ++ ++P +  +    + LM+E+  L   +    E +        
Sbjct: 3   MFDKLDDLLIRFEELMSELQEPDVANDQNRFRKLMKEQSDLAPIVEAYNEYKSAKQAITD 62

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
             E+   E D  + +   + L   K  VE  + E           D  +  +E+ AGAGG
Sbjct: 63  SEEMLEMESDEEMRELAKEELSSSKKRVEELEHELKILLLPKDPNDDKNIMVEIRAGAGG 122

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            ES  +A  + RMY  +AE R +KTE +   +    G K    ++ G   Y  +K E GV
Sbjct: 123 DESALFAAEVYRMYVHYAESRHWKTEMISFSENGIGGFKEVVFMVSGQGVYSRMKYESGV 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + +++ I E D RID  RASG GGQ VNTTD
Sbjct: 183 HRVQRVPETESGGRIHTSTITVAVMP-EAEEVDVVIDEKDIRIDVMRASGNGGQCVNTTD 241

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLYELEL+K++  +   E+ +++IG
Sbjct: 242 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQ--SAEAEARRSQIG 299

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V + R  +      ++++GDLD+ + + +A  +
Sbjct: 300 TGDRSEKIRTYNF-PQGRVTEHRIKLTLYKIDNIMNGDLDEIIDSLIAADQ 349


>gi|153956299|ref|YP_001397064.1| peptide chain release factor 1 [Clostridium kluyveri DSM 555]
 gi|189039965|sp|A5N3J7|RF1_CLOK5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|146349157|gb|EDK35693.1| PrfA [Clostridium kluyveri DSM 555]
          Length = 357

 Score =  237 bits (603), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 117/347 (33%), Positives = 190/347 (54%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    +   L+ K  DP +  +  + + L +E   L+  +   +E ++ L D     E+
Sbjct: 5   LNFIENKYEELSIKISDPTIIADQKKWQKLCKEHAELEEIVMKYREYKEALQDLEDNKEM 64

Query: 76  ALEEDDCSILQETSDNLQR----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  + +   + ++R    I+   +  +   L     D  + ++E+  GAGG E+ 
Sbjct: 65  LREETDKDMREMEQEEIKRLGDIIEKREDELKILLLPKDPNDDKNVFVEIRGGAGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE + +K E + +   +  G K    ++KG +AY  LK E G HR+ 
Sbjct: 125 LFAANLTRMYTRYAEIKGWKVETISLSATDIGGFKEIVFMVKGKDAYSRLKYESGTHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P   D ++I ++++D RID +RASG GGQ VNTTDSAVR
Sbjct: 185 RVPDTESSGRIHTSTATVAVLP-EVDDVDIVVNQNDIRIDVFRASGHGGQCVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ E+SQ KNK +A  +L+++LYE   ++R   A+I E  K ++G G  
Sbjct: 244 ITHLPTGLVVSCQDEKSQLKNKEKAMKVLKSRLYEKAQEERN--ASIAEDRKNQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +        L+GD+D+ + A +   +
Sbjct: 302 SERIRTYNY-PQGRVTDHRIGMTLYKLDSFLNGDIDEIIDALITEDQ 347


>gi|59801687|ref|YP_208399.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA 1090]
 gi|240017030|ref|ZP_04723570.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA6140]
 gi|240118391|ref|ZP_04732453.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID1]
 gi|268604103|ref|ZP_06138270.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID1]
 gi|75432438|sp|Q5F750|RF1_NEIG1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|59718582|gb|AAW89987.1| putative peptide chain release factor I [Neisseria gonorrhoeae FA
           1090]
 gi|268588234|gb|EEZ52910.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID1]
          Length = 358

 Score =  237 bits (603), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 119/349 (34%), Positives = 174/349 (49%), Gaps = 8/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +       RL  +      P    ++   + L RE   L   +   +  +    D  
Sbjct: 4   SILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQSDLA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E+  + +      E  +  +          Q   L     D  + ++E+ AG GG E
Sbjct: 64  DAEEMLSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEIRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR
Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  +IE++ +D R DT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRTDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G
Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREVQAKEAAERKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V+DGDL +   A +A  +
Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQ 349


>gi|194246500|ref|YP_002004139.1| Bacterial peptide chain release factor 2 [Candidatus Phytoplasma
           mali]
 gi|193806857|emb|CAP18286.1| Bacterial peptide chain release factor 2 [Candidatus Phytoplasma
           mali]
          Length = 363

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 155/350 (44%), Positives = 226/350 (64%), Gaps = 2/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L + L+ L    + +   +RL  LN      + W+N  +AK + +E + L+  I  +++ 
Sbjct: 13  LKKILDDLEIGMNLNKQKKRLKDLNHLINLSNFWENFEKAKKINQEFKSLNEKIYKMQKF 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            +   D L LL++    ++          L  +K  ++  +   LL+   D  +A L +H
Sbjct: 73  HEEYRDLLSLLKITK--ENTDDFLFLEQTLLSLKKNIQDFEINILLNQTYDKKNAILILH 130

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGG ESQDW  MLLRMY ++A+K+ FK   L+   G+ AG+KS +LLIKG  AYG+LK
Sbjct: 131 PGAGGIESQDWCEMLLRMYQKYAQKKNFKIVVLDYQVGDVAGLKSVSLLIKGVYAYGYLK 190

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DSNS+RHTSF+S  V P ++++IEI+I E + +ID +R+SGAGGQH
Sbjct: 191 SEKGVHRLVRISPFDSNSKRHTSFTSCDVLPEINENIEIKIKEEELKIDVFRSSGAGGQH 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PT +V+ CQ ERSQ +NK +A  +L+ KL++ E++K+E    + +  
Sbjct: 251 VNTTDSAVRLTHLPTNIVINCQNERSQTRNKERALQILKTKLFQREIKKQEINLKLIQGV 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           + EI WG QIRSY+  PYQ+VKD RTN+E      V+DGDLD F+ + L 
Sbjct: 311 QKEISWGNQIRSYIFHPYQLVKDHRTNVESYQIESVIDGDLDLFISSFLK 360


>gi|15842676|ref|NP_337713.1| peptide chain release factor 2 [Mycobacterium tuberculosis CDC1551]
 gi|13882995|gb|AAK47527.1| peptide chain release factor 2 [Mycobacterium tuberculosis CDC1551]
          Length = 371

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 156/355 (43%), Positives = 214/355 (60%), Gaps = 4/355 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D +    R+  L  +  DPHLW +   A+ +  E  H    +  ++E+
Sbjct: 12  LDCTLTTVERVLDVEGLRSRIEKLEHEASDPHLWDDQTRAQRVTSELSHTQGELRRVEEL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYL 119
           + RL D  +L ELA EE   +     ++    +K      +     +LLSGE D  +A +
Sbjct: 72  RRRLDDLPVLYELAAEEAGAAAADAVAEADAELKSLRADIEATEVRTLLSGEYDEREALV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+ K+  E  +    EEAGIKSAT  +  P AYG
Sbjct: 132 TIRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+ SRR TSF+ + V PVV+ +  I+I E D R+D YR+SG G
Sbjct: 192 TLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+THIP+G+VV CQ E+SQ +NK  A  +L+AKL E    +     +  
Sbjct: 252 GQSVNTTDSAVRLTHIPSGIVVTCQNEKSQLQNKIAAMRVLQAKLLERXRLEERAELDAL 311

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           ++      WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGDLD F++A +  +
Sbjct: 312 KADGGS-SWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDLDGFLEAGIRWR 365


>gi|296394151|ref|YP_003659035.1| peptide subunit release factor 2 [Segniliparus rotundus DSM 44985]
 gi|296181298|gb|ADG98204.1| peptide chain release factor 2 [Segniliparus rotundus DSM 44985]
          Length = 372

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 151/358 (42%), Positives = 218/358 (60%), Gaps = 8/358 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+  L  +    D D     ++ L T+  DP LW++    + +          +  +  +
Sbjct: 12  LATTLCTVESALDLDKLRAEIADLETQAADPSLWEDQERGQEVTSGLARKQATLRAVTGL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + RL D  +L ELA +E+     +   +     + ++ E+E  +  +LL+GE D  +A +
Sbjct: 72  RSRLDDLHVLYELAEDEEGAQGQEALEEADTERKTLRAEIESLEVRTLLNGEYDEREALV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+ K   E  +I   EEAGIKSAT  +K   AYG
Sbjct: 132 TIRSGAGGIDAADWAQMLMRMYIRWAERHKHPVEVYDISYAEEAGIKSATFAVKSAYAYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+  RR TSF+ + V PVV  +  I++ E++ R+D YR+SG G
Sbjct: 192 TLSVEQGTHRLVRISPFDNQGRRQTSFADVEVLPVVGTTDHIDVPEAEIRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVRITH+PTG+VV CQ E+SQ +NK  A  +L+AKL E   ++R E     
Sbjct: 252 GQSVNTTDSAVRITHLPTGIVVTCQNEKSQLQNKLSAMRVLQAKLLE---RRRHEEQEQL 308

Query: 300 ESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            + K + G  WG Q+RSYVL PYQMVKDLRT  E+++P  VLDG +D F+++ +  ++
Sbjct: 309 NALKGDGGTSWGTQMRSYVLAPYQMVKDLRTEYEESNPGAVLDGAIDGFLESGIRWRR 366


>gi|92117370|ref|YP_577099.1| peptide chain release factor 2 [Nitrobacter hamburgensis X14]
 gi|91800264|gb|ABE62639.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrobacter
           hamburgensis X14]
          Length = 322

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 199/309 (64%), Positives = 250/309 (80%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L+++++ I +++  L D + ++EL   E+D +I+ ++ + L+ +K EV  ++ E
Sbjct: 1   MQERTSLEDSLTGIGKVERELEDQIGMIELGEAENDQAIVNDSENALKNLKKEVARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  + YLEVHAGAGGTESQDWA+MLLRMY RWAEKR FK E LE   GEEAGI
Sbjct: 61  ALLSGEADRFNTYLEVHAGAGGTESQDWASMLLRMYARWAEKRGFKIEYLEETPGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ + G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PVVDDSI+I+I E
Sbjct: 121 KSATIQVSGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVVDDSIKIDIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           ++EL+KREE A   +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ +  S VLDGDLD+
Sbjct: 241 QIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300

Query: 346 FMKATLAIK 354
           FM ATLA K
Sbjct: 301 FMAATLAQK 309


>gi|254500720|ref|ZP_05112871.1| peptide chain release factor 2 [Labrenzia alexandrii DFL-11]
 gi|222436791|gb|EEE43470.1| peptide chain release factor 2 [Labrenzia alexandrii DFL-11]
          Length = 322

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 222/309 (71%), Positives = 260/309 (84%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD+ I+ +K ++  L DN+ L+EL   EDD S++++  + L+ +K +V   Q +
Sbjct: 1   MRERQQLDDGINGVKGLEQELADNIELIELGEMEDDKSVVEDAEEALRGLKDKVNQLQLD 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD ND YLE+++GAGGTESQDWA+MLLRMY RWAEKR +K E LE HDGEEAGI
Sbjct: 61  SLLSGEADGNDTYLEINSGAGGTESQDWASMLLRMYRRWAEKRGYKVELLEYHDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLLIKG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSS WVYPV+DDSIEI+++E
Sbjct: 121 KSATLLIKGENAYGWLKTESGVHRLVRISPYDSNARRHTSFSSAWVYPVIDDSIEIDVNE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYRASGAGGQHVNTTDSAVRITH PTG+VVQCQ ERSQHKN+A AW ML+A+LY
Sbjct: 181 SDCRIDTYRASGAGGQHVNTTDSAVRITHQPTGIVVQCQSERSQHKNRATAWGMLKARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE AN   +SKT+IGWG QIRSYVLQPYQ+VKDLRT ++ TSP DVLDG LD 
Sbjct: 241 EAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVQSTSPDDVLDGSLDS 300

Query: 346 FMKATLAIK 354
           FM+A LA +
Sbjct: 301 FMEAALAQR 309


>gi|209964906|ref|YP_002297821.1| peptide chain release factor 2 PrfB [Rhodospirillum centenum SW]
 gi|209958372|gb|ACI99008.1| peptide chain release factor 2 PrfB [Rhodospirillum centenum SW]
          Length = 319

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 194/309 (62%), Positives = 245/309 (79%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRE+  L+NA++  +E++  L D+L L+ELA  E D  ++ +    +  +K      + E
Sbjct: 1   MREKTQLENALTGTRELERDLRDSLELIELAEAEGDAEMVADAEKTIAALKERAAKMELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD+ND +LEV++GAGGTESQDWA MLLRMYTRWAE+  +K + L+   GEEAGI
Sbjct: 61  SLLSGEADANDCFLEVNSGAGGTESQDWALMLLRMYTRWAEQHGYKVDELDETPGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ IKG N YGWLK E GVHRLVRISP+DS +RRHTSF+S+ V PV+DD I +EI+E
Sbjct: 121 KSATIQIKGHNGYGWLKTESGVHRLVRISPFDSQARRHTSFASVSVTPVIDDRIVVEINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D ++DTYR+SGAGGQHVN TDSAVR+TH+PTG+VV CQQERSQHKN+A+AW+MLRA++Y
Sbjct: 181 KDVKVDTYRSSGAGGQHVNKTDSAVRLTHLPTGIVVACQQERSQHKNRAKAWDMLRARIY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   E++KTEIGWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD 
Sbjct: 241 EMELRKREEAAAALEATKTEIGWGHQIRSYVLQPYQMVKDLRTGVETSDSGGVLDGDLDR 300

Query: 346 FMKATLAIK 354
           F++A LA +
Sbjct: 301 FLQAALAQR 309


>gi|46200154|ref|YP_005821.1| peptide chain release factor 2 [Thermus thermophilus HB27]
 gi|55980111|ref|YP_143408.1| peptide chain release factor 2 [Thermus thermophilus HB8]
 gi|218766794|pdb|3F1E|X Chain X, Crystal Structure Of A Translation Termination Complex
           Formed With Release Factor Rf2. This File Contains The
           30s Subunit, Rf2, Two Trna, And Mrna Molecules Of One
           70s Ribosome. The Entire Crystal Structure Contains Two
           70s Ribosomes As Described In Remark 400.
 gi|218766850|pdb|3F1G|X Chain X, Crystal Structure Of A Translation Termination Complex
           Formed With Release Factor Rf2. This File Contains The
           30s Subunit, Rf2, Two Trna, And Mrna Molecules Of The
           Second 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes As Described In Remark 400.
 gi|46197782|gb|AAS82194.1| bacterial peptide chain release factor 2 (RF-2) [Thermus
           thermophilus HB27]
 gi|55771524|dbj|BAD69965.1| peptide chain release factor 2 [Thermus thermophilus HB8]
          Length = 378

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 152/351 (43%), Positives = 205/351 (58%), Gaps = 5/351 (1%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
                  GG+FD      RL  L  + EDP LW +   A+ + +E   L   +   + ++
Sbjct: 20  RNAWKASGGIFDIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRSLE 79

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L   L L+E    E+  +        L+    +++    ++LL+      +A L +  
Sbjct: 80  SDLQGLLELMEELPAEEREA----LKPELEEAAKKLDELYHQTLLNFPHAEKNAILTIQP 135

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+ DWA MLLRMYTR+AE++ F+ E +++  G EAGI  A +L+KG NAYG L  
Sbjct: 136 GAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQILVKGENAYGLLSP 195

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+D++ RRHTSF+ + V P VD+ +E+ +   + RID  RASG GGQ V
Sbjct: 196 EAGVHRLVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQGV 255

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVR+ H+PTG+ V CQ  RSQ KNK  A  +L+A+LYELE +KREE         
Sbjct: 256 NTTDSAVRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRGEV 315

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             I WG QIRSYVL     VKD RT + +  P +VLDGDL D + A L  K
Sbjct: 316 RPIEWGSQIRSYVLDK-NYVKDHRTGLMRHDPENVLDGDLMDLIWAGLEWK 365


>gi|327312646|ref|YP_004328083.1| putative peptide chain release factor 2 [Prevotella denticola
           F0289]
 gi|326945641|gb|AEA21526.1| putative peptide chain release factor 2 [Prevotella denticola
           F0289]
          Length = 371

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 124/359 (34%), Positives = 204/359 (56%), Gaps = 12/359 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  + + L    D D           +T+ P  W +   A+  M++ + ++  I    E 
Sbjct: 10  IQVRTDALHRYLDIDRKRIEFEEEQLRTQAPDFWDDPKRAQEQMKKVKDIEKWIKGYDEA 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +     D+    +E      +    +E  + +++L  E D  +  ++++
Sbjct: 70  RSLTEETQLAFDFYK--DELVTEEEVDAAYAKALKVIEDLELKNMLRQEEDPMECVMKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWL 181
           +GAGGTESQDWA+ML+RMY RW E   +K    +I +G+EAGIKS T+  + G  AYG+L
Sbjct: 128 SGAGGTESQDWASMLMRMYMRWGEAHGYKVTVSDIQEGDEAGIKSVTMKFEGGEYAYGYL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SP+++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ
Sbjct: 188 KSENGVHRLVRVSPFNAQGKRMTSFASVFVTPLVDDTIEVYVDPARVSWDTFRSSGAGGQ 247

Query: 242 HVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  +S VR+ +            ++++  + R Q KN+A+A  +L+++LY+  ++KR 
Sbjct: 248 NVNKVESGVRLRYQYEDPDTGEQEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRM 307

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           E     E+ K +I WG QIRSYV    + VKD RTN + +    V+DG +D F+KA L 
Sbjct: 308 EEQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKIDAFIKAYLM 365


>gi|315127042|ref|YP_004069045.1| peptide chain release factor 1 [Pseudoalteromonas sp. SM9913]
 gi|315015556|gb|ADT68894.1| peptide chain release factor 1 [Pseudoalteromonas sp. SM9913]
          Length = 361

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 121/346 (34%), Positives = 184/346 (53%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72
            +  V+R   +     DP +  +    + L +E   L+  +      Q    D      +
Sbjct: 9   LETLVERYEEVQALLSDPSVISDQNRFRTLSKEYSELEEVVKTFLAYQQAQEDLSSAEEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L+ +  E      +E  +   +I    +  Q   L     D+N+ +LEV AG GG E+  
Sbjct: 69  LKDSDPEMREMAQEEYKEAKAQISTLEDDIQVLMLPKDPKDNNNVFLEVRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE +K+K E +  ++GE  G K     I G   YG LK E GVHR+ R
Sbjct: 129 FAGDLFRMYSRYAETKKWKVEVVTTNEGEHGGYKEVIANISGEGVYGQLKFESGVHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   V ++  IEI+ +D ++DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRVHTSACTVAVMAEVPEAEAIEINTADIKVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTGVVV+CQ ERSQHKN+A+A ++L A+L + E +KR   A      +  +G G   
Sbjct: 249 THLPTGVVVECQDERSQHKNRAKAMSVLAARLQQAEDEKR--HAAEASERRNLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N+     ++V+ GDL   ++  +   +
Sbjct: 307 ERIRTYNY-PQGRITDHRINLTLYRLNEVVAGDLGAVVEPLMQEHQ 351


>gi|212213424|ref|YP_002304360.1| peptide chain release factor 1 [Coxiella burnetii CbuG_Q212]
 gi|238058711|sp|B6J390|RF1_COXB2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|212011834|gb|ACJ19215.1| bacterial peptide chain release factor 1 [Coxiella burnetii
           CbuG_Q212]
          Length = 361

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 111/343 (32%), Positives = 175/343 (51%), Gaps = 9/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
                 R S +     D  +  +    + L +E   L+  +   ++ Q     +     +
Sbjct: 9   LKTLTYRYSEIGGLLSDSTVINDQDRYRELGKEYAQLEPIVKCFQQFQQNEKAIESAEEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +    E      +E      + +   +  +   +     D  + +LE+ AG GG E+  
Sbjct: 69  QQEKDPELRKLAEEELEQLTLKKEELEDQLKLLLVPKDPNDELNVFLEIRAGTGGNEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY R+AE + ++   +  H+GE  G K     + G   Y  LK E G HR+ R
Sbjct: 129 FAGDLFRMYARYAETKGWRVNIVSAHEGEHGGFKEVIARVIGEGVYSQLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ + P VD+  +I+I+ ++ RIDT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPVTESQGRIHTSACTVAIMPEVDEIDQIKINPAELRIDTFRASGAGGQHVNRTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTGVVV+CQ ERSQHKNKA+A ++L++KL   E  K+++        K+ +G G   
Sbjct: 249 THLPTGVVVECQDERSQHKNKARAMSLLQSKLLAAERAKQDQEQ--AAKRKSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            +IR+Y   P   V D R N+      +V++GDLD  +   + 
Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYQLDEVIEGDLDPVIGPLIR 348


>gi|291517989|emb|CBK73210.1| bacterial peptide chain release factor 2 (bRF-2) [Butyrivibrio
           fibrisolvens 16/4]
          Length = 338

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 148/324 (45%), Positives = 211/324 (65%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P  W +   +   M+E + + + ++ I +++D   +    +EL  EE+D  I+   +
Sbjct: 1   MEAPDFWTDAQVSTAKMKELKSMKDDVAVIDKLEDLYKEIEDYIELGNEEEDQEIVDTVA 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++  + ++E  + ++LLSGE DS+ A + +H+GAGG E+ DW  ML RMY+RWA    
Sbjct: 61  LLIEEFENDLESLRMKTLLSGEYDSDSAIVTLHSGAGGVEACDWVQMLYRMYSRWASDMG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  + L+  +G+EAGIKS T  + G NAYG+LK E+G+HRLVRISP+++  +R TSF+S 
Sbjct: 121 FAVDELDYQEGDEAGIKSVTFQVNGDNAYGYLKSEKGIHRLVRISPFNAQGKRQTSFASC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ +++EI + D RIDTYR+SGAGGQH+N T SA+RITH PTG+VV CQ ERSQ
Sbjct: 181 DVMPDIEEDVDVEIRDEDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVTCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +NK +A  ML+ KL  L+ ++    A+      +EIGWG QIRSYVLQPY MVKDLRT 
Sbjct: 241 FQNKDKAMQMLKTKLLLLKQEENAAKASGIRGEVSEIGWGNQIRSYVLQPYTMVKDLRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E  +   VLDG L  FM A L  
Sbjct: 301 EESGNADAVLDGKLTPFMNAYLKW 324


>gi|219856616|ref|YP_002473738.1| hypothetical protein CKR_3273 [Clostridium kluyveri NBRC 12016]
 gi|219570340|dbj|BAH08324.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 367

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 119/363 (32%), Positives = 198/363 (54%), Gaps = 14/363 (3%)

Query: 1   MKLSRQLNCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
           MK+  + + +  + +  +    +   L+ K  DP +  +  + + L +E   L+  +   
Sbjct: 1   MKILIRSDKI--MLERLNFIENKYEELSIKISDPTIIADQKKWQKLCKEHAELEEIVMKY 58

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQR----IKLEVEYKQFESLLSGEADSN 115
           +E ++ L D     E+  EE D  + +   + ++R    I+   +  +   L     D  
Sbjct: 59  REYKEALQDLEDNKEMLREETDKDMREMEQEEIKRLGDIIEKREDELKILLLPKDPNDDK 118

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           + ++E+  GAGG E+  +A  L RMYTR+AE + +K E + +   +  G K    ++KG 
Sbjct: 119 NVFVEIRGGAGGEEAALFAANLTRMYTRYAEIKGWKVETISLSATDIGGFKEIVFMVKGK 178

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           +AY  LK E G HR+ R+   +S+ R HTS +++ V P   D ++I ++++D RID +RA
Sbjct: 179 DAYSRLKYESGTHRVQRVPDTESSGRIHTSTATVAVLP-EVDDVDIVVNQNDIRIDVFRA 237

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQ VNTTDSAVRITH+PTG+VV CQ E+SQ KNK +A  +L+++LYE   ++R   
Sbjct: 238 SGHGGQCVNTTDSAVRITHLPTGLVVSCQDEKSQLKNKEKAMKVLKSRLYEKAQEERN-- 295

Query: 296 ANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           A+I E  K ++G G    +IR+Y   P   V D R  +        L+GD+D+ + A + 
Sbjct: 296 ASIAEDRKNQVGTGDRSERIRTYNY-PQGRVTDHRIGMTLYKLDSFLNGDIDEIIDALIT 354

Query: 353 IKK 355
             +
Sbjct: 355 EDQ 357


>gi|194099102|ref|YP_002002187.1| peptide chain release factor 1 [Neisseria gonorrhoeae NCCP11945]
 gi|239999408|ref|ZP_04719332.1| peptide chain release factor 1 [Neisseria gonorrhoeae 35/02]
 gi|240014585|ref|ZP_04721498.1| peptide chain release factor 1 [Neisseria gonorrhoeae DGI18]
 gi|240081334|ref|ZP_04725877.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA19]
 gi|240113543|ref|ZP_04728033.1| peptide chain release factor 1 [Neisseria gonorrhoeae MS11]
 gi|240116107|ref|ZP_04730169.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID18]
 gi|240121107|ref|ZP_04734069.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID24-1]
 gi|240123936|ref|ZP_04736892.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID332]
 gi|240126136|ref|ZP_04739022.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-92-679]
 gi|240128613|ref|ZP_04741274.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-93-1035]
 gi|254494127|ref|ZP_05107298.1| peptide chain release factor 1 [Neisseria gonorrhoeae 1291]
 gi|260440083|ref|ZP_05793899.1| peptide chain release factor 1 [Neisseria gonorrhoeae DGI2]
 gi|268595228|ref|ZP_06129395.1| peptide chain release factor 1 [Neisseria gonorrhoeae 35/02]
 gi|268597436|ref|ZP_06131603.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA19]
 gi|268599608|ref|ZP_06133775.1| peptide chain release factor 1 [Neisseria gonorrhoeae MS11]
 gi|268601773|ref|ZP_06135940.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID18]
 gi|268682561|ref|ZP_06149423.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID332]
 gi|268684722|ref|ZP_06151584.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-92-679]
 gi|268687001|ref|ZP_06153863.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-93-1035]
 gi|291043371|ref|ZP_06569094.1| peptide chain release factor 1 [Neisseria gonorrhoeae DGI2]
 gi|238690206|sp|B4RN52|RF1_NEIG2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|193934392|gb|ACF30216.1| peptide chain release factor 1 [Neisseria gonorrhoeae NCCP11945]
 gi|226513167|gb|EEH62512.1| peptide chain release factor 1 [Neisseria gonorrhoeae 1291]
 gi|268548617|gb|EEZ44035.1| peptide chain release factor 1 [Neisseria gonorrhoeae 35/02]
 gi|268551224|gb|EEZ46243.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA19]
 gi|268583739|gb|EEZ48415.1| peptide chain release factor 1 [Neisseria gonorrhoeae MS11]
 gi|268585904|gb|EEZ50580.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID18]
 gi|268622845|gb|EEZ55245.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID332]
 gi|268625006|gb|EEZ57406.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-92-679]
 gi|268627285|gb|EEZ59685.1| peptide chain release factor 1 [Neisseria gonorrhoeae SK-93-1035]
 gi|291012977|gb|EFE04960.1| peptide chain release factor 1 [Neisseria gonorrhoeae DGI2]
 gi|317164656|gb|ADV08197.1| peptide chain release factor 1 [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 358

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 119/349 (34%), Positives = 174/349 (49%), Gaps = 8/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +       RL  +      P    ++   + L RE   L   +   +  +    D  
Sbjct: 4   SILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAELTPVVEVFQNYRLAQSDLA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E+  + +      E  +  +          Q   L     D  + ++E+ AG GG E
Sbjct: 64  DAEEMLSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEIRAGTGGGE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR
Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  +IE++ +D R DT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRTDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G
Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREVQAKEAAERKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V+DGDL +   A +A  +
Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQ 349


>gi|289425462|ref|ZP_06427239.1| peptide chain release factor 2 [Propionibacterium acnes SK187]
 gi|289154440|gb|EFD03128.1| peptide chain release factor 2 [Propionibacterium acnes SK187]
 gi|313771879|gb|EFS37845.1| peptide chain release factor 2 [Propionibacterium acnes HL074PA1]
 gi|313807112|gb|EFS45607.1| peptide chain release factor 2 [Propionibacterium acnes HL087PA2]
 gi|313809604|gb|EFS47340.1| peptide chain release factor 2 [Propionibacterium acnes HL083PA1]
 gi|313813321|gb|EFS51035.1| peptide chain release factor 2 [Propionibacterium acnes HL025PA1]
 gi|313819308|gb|EFS57022.1| peptide chain release factor 2 [Propionibacterium acnes HL046PA2]
 gi|313819957|gb|EFS57671.1| peptide chain release factor 2 [Propionibacterium acnes HL036PA1]
 gi|313823250|gb|EFS60964.1| peptide chain release factor 2 [Propionibacterium acnes HL036PA2]
 gi|313824962|gb|EFS62676.1| peptide chain release factor 2 [Propionibacterium acnes HL063PA1]
 gi|313829923|gb|EFS67637.1| peptide chain release factor 2 [Propionibacterium acnes HL007PA1]
 gi|313833072|gb|EFS70786.1| peptide chain release factor 2 [Propionibacterium acnes HL056PA1]
 gi|314924796|gb|EFS88627.1| peptide chain release factor 2 [Propionibacterium acnes HL036PA3]
 gi|314960646|gb|EFT04748.1| peptide chain release factor 2 [Propionibacterium acnes HL002PA2]
 gi|314972908|gb|EFT17005.1| peptide chain release factor 2 [Propionibacterium acnes HL053PA1]
 gi|314975668|gb|EFT19763.1| peptide chain release factor 2 [Propionibacterium acnes HL045PA1]
 gi|314978052|gb|EFT22146.1| peptide chain release factor 2 [Propionibacterium acnes HL072PA2]
 gi|314984148|gb|EFT28240.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA1]
 gi|314989571|gb|EFT33662.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA3]
 gi|315080944|gb|EFT52920.1| peptide chain release factor 2 [Propionibacterium acnes HL078PA1]
 gi|315084867|gb|EFT56843.1| peptide chain release factor 2 [Propionibacterium acnes HL027PA2]
 gi|315086040|gb|EFT58016.1| peptide chain release factor 2 [Propionibacterium acnes HL002PA3]
 gi|315088241|gb|EFT60217.1| peptide chain release factor 2 [Propionibacterium acnes HL072PA1]
 gi|315095727|gb|EFT67703.1| peptide chain release factor 2 [Propionibacterium acnes HL038PA1]
 gi|315105991|gb|EFT77967.1| peptide chain release factor 2 [Propionibacterium acnes HL030PA1]
 gi|327327935|gb|EGE69709.1| peptide chain release factor 2 [Propionibacterium acnes HL096PA3]
 gi|327330072|gb|EGE71825.1| peptide chain release factor 2 [Propionibacterium acnes HL096PA2]
 gi|327442693|gb|EGE89347.1| peptide chain release factor 2 [Propionibacterium acnes HL043PA1]
 gi|327443908|gb|EGE90562.1| peptide chain release factor 2 [Propionibacterium acnes HL043PA2]
 gi|327443976|gb|EGE90630.1| peptide chain release factor 2 [Propionibacterium acnes HL013PA2]
 gi|328754956|gb|EGF68572.1| peptide chain release factor 2 [Propionibacterium acnes HL020PA1]
 gi|328761406|gb|EGF74932.1| peptide chain release factor 2 [Propionibacterium acnes HL099PA1]
          Length = 371

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 221/353 (62%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D +     ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 16  LDASLSSIENVLDPEAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A  +DD   L E +    +++ E++  +  +LLSG+ D  +A + + 
Sbjct: 76  RARIEDVHVLLEFAAADDDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RW+E+  +K E L+    EEAGIKSAT ++  P AYG L 
Sbjct: 136 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 196 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL E   +++E   N  +S 
Sbjct: 256 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSE 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRTN E  +   V DGD+DDF+ A +  ++
Sbjct: 316 GN--SWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 366


>gi|238022362|ref|ZP_04602788.1| hypothetical protein GCWU000324_02269 [Kingella oralis ATCC 51147]
 gi|237866976|gb|EEP68018.1| hypothetical protein GCWU000324_02269 [Kingella oralis ATCC 51147]
          Length = 358

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 120/344 (34%), Positives = 174/344 (50%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             N   RL  +      P    N+   + L +E   L   +           D     E+
Sbjct: 9   LQNLSHRLEEVTALLGSPEATANMDSYRRLNQEHAELTPIVDTYHAYTQAQSDLADAQEM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +      E        I+      Q   L     D  + ++E+ AG GG E+  +A
Sbjct: 69  LSDPEMKDFAFEEIQAAKDTIERLDLELQKLLLPKDADDDKNIFIEIRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+ +++TE +   + +  G K   + + G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYTRYAERNRWQTEIVSASESDLGGYKEVIVRLVGLGAYSKLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  +IE+++ D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEADELAKIELNDKDLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ  RSQH NK +A  +L A+L ++  QKRE  A      K+ IG G    +
Sbjct: 249 LPTGLVVECQDGRSQHTNKEKALKVLAARLNDI--QKREAHAKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       V+DGD+D+   A +A  +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLHKLDFVMDGDMDEITSALIAEHQ 349


>gi|314986213|gb|EFT30305.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA2]
          Length = 371

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 221/353 (62%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D +     ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 16  LDASLSSIENVLDPEAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A  +DD   L E +    +++ E++  +  +LLSG+ D  +A + + 
Sbjct: 76  RARIEDVHVLLEFAAADDDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RW+E+  +K E L+    EEAGIKSAT ++  P AYG L 
Sbjct: 136 SEAGGVDASDFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 196 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL E   +++E   N  +S 
Sbjct: 256 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSE 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRTN E  +   V DGD+DDF+ A +  ++
Sbjct: 316 GN--SWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 366


>gi|238917365|ref|YP_002930882.1| peptide chain release factor RF-1 [Eubacterium eligens ATCC 27750]
 gi|259585239|sp|C4Z1S4|RF1_EUBE2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238872725|gb|ACR72435.1| peptide chain release factor RF-1 [Eubacterium eligens ATCC 27750]
          Length = 357

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 123/351 (35%), Positives = 185/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ V R   +  +  +P +  +  + K LM+E+  L   I    E ++   +   
Sbjct: 1   MFDRLEDTVNRYEDITAELGNPDVVNDQEKFKKLMKEQSSLAPLIETYTEYKNCKKNIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   + L   K  VE  + E           D  D  +E+ AGAGG
Sbjct: 61  SLAILDEETDEELKEMAKEELNESKARVEELEHELKILLLPKDPNDDKDIVVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY  +A+ R +K E L   +    G+K    ++KG  AY  +K E GV
Sbjct: 121 EEAALFAAELFRMYVHYAQARGWKVEVLSGDETGIGGMKEVEFMVKGQGAYSIMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +SN R  TS +S+ V P   + ++I I E D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRIPVTESNGRIQTSTASVAVMP-EAEEVDIHIDEKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LRAKLY++E QK        ++ +++IG
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQIQNKEKAFALLRAKLYDIETQK--AHDAEADARRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       ++DGD+ D + A +A  +
Sbjct: 298 TGDRAEKIRTYNF-PQGRVTDHRIGLTLYKLDKIMDGDIQDIIDACIAADQ 347


>gi|288575018|ref|ZP_06393375.1| peptide chain release factor 2 [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570759|gb|EFC92316.1| peptide chain release factor 2 [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 336

 Score =  237 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 161/330 (48%), Positives = 212/330 (64%), Gaps = 2/330 (0%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L+     P  W    +A+ +  +   L++ IS    +     D ++L EL  EEDD  + 
Sbjct: 8   LHEIMALPDFWG-RDDAQRISTDLARLESRISSWDRMSSEYQDLVVLAELLDEEDDQELE 66

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E     + +   ++    E LL+G+ D N+A + VHAG+GG +SQDWA ML RMY RW 
Sbjct: 67  AEFFSRSESLSKSMDAFSMELLLNGDYDGNNAIMTVHAGSGGLDSQDWAEMLYRMYLRWC 126

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E   +KT+ L+    EE GIK+ TLL++G  AYG+L+ E GVHRLVRISP+D+  RRHTS
Sbjct: 127 ESNHYKTKILDYQRDEEGGIKTVTLLVEGDFAYGYLQSEVGVHRLVRISPFDTAKRRHTS 186

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           F+S+ V P + D +E++I   D RIDT+RASGAGGQHVN TDSAVRITHIPTG+VV CQ 
Sbjct: 187 FASVDVAPELPDDVEVDIRTEDLRIDTFRASGAGGQHVNMTDSAVRITHIPTGIVVSCQN 246

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKD 325
           ERSQH NKA A  +LR KLYE  + +R++  +     K EI WG QIRSYVL PY MVKD
Sbjct: 247 ERSQHMNKAVAMQVLRGKLYERSMSERQDTLDSLHD-KKEISWGNQIRSYVLHPYTMVKD 305

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            RT  E  + + VLDGDL+ F+ + L  +K
Sbjct: 306 HRTGEETGNAAAVLDGDLERFILSYLRWRK 335


>gi|291167022|gb|EFE29068.1| peptide chain release factor 2 [Filifactor alocis ATCC 35896]
          Length = 338

 Score =  236 bits (602), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 152/337 (45%), Positives = 217/337 (64%), Gaps = 2/337 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             Q     + K ED   W N+  ++ +++  + L+  +         L +  IL EL   
Sbjct: 1   MKQEKQQNDLKMEDADFWNNLELSQHIVKRNKELERTLDIYSSAFSELEEVEILFELTK- 59

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
            +D  + +E    +  +  ++E  + ++LL GE D N+A L +HAG+GG ++QDWA MLL
Sbjct: 60  -EDSELEKELEQCINELSEKMEQLKIQTLLDGEYDGNNAILSIHAGSGGLDAQDWAQMLL 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY R+     ++   L+     EAGIKS TL I+GPNAYG+LK E+GVHR+VRISP+DS
Sbjct: 119 RMYLRFCHDMGYRVIELDSLSDSEAGIKSVTLQIEGPNAYGFLKSEKGVHRIVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           + +RHTSF+S+ V P +DD++E++I  +D +IDTYRASGAGGQHVN TDSAVRITHIPTG
Sbjct: 179 SGKRHTSFTSVDVIPEMDDTVEVDIDTNDLKIDTYRASGAGGQHVNKTDSAVRITHIPTG 238

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +V+ CQ ERSQH N+  A  ML +KL ++++++ +E         ++I WG QIRSYV Q
Sbjct: 239 IVITCQNERSQHSNRETAMKMLFSKLMDIKIREHKEKIEDISGEYSQIAWGSQIRSYVFQ 298

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           PY +VKD RTN E  S   V+DG++  F+ A L  +K
Sbjct: 299 PYTLVKDHRTNHEIGSVQSVMDGNIMPFINAYLKQQK 335


>gi|238752991|ref|ZP_04614450.1| Peptide chain release factor 2 [Yersinia rohdei ATCC 43380]
 gi|238708779|gb|EEQ01038.1| Peptide chain release factor 2 [Yersinia rohdei ATCC 43380]
          Length = 310

 Score =  236 bits (602), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 172/308 (55%), Positives = 217/308 (70%), Gaps = 1/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
            +ER  L+  ++ I ++   + D   LLELA+E DD     E    L  +  ++   +F 
Sbjct: 2   GKERSALEEIVTTIDQLDQGMEDVSGLLELAIEADDEETFNEAIAELDILDGKLGQLEFR 61

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            + SGE DS + YL++ AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  DG+ AGI
Sbjct: 62  RMFSGEYDSANCYLDLQAGSGGTEAQDWASMLLRMYLRWAEARGFKTEIIEESDGDVAGI 121

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ 
Sbjct: 122 KSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINP 181

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLY
Sbjct: 182 ADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLY 241

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E E+QK+     + E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD 
Sbjct: 242 EFEMQKKNADKQVLEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDK 300

Query: 346 FMKATLAI 353
           F++A+L  
Sbjct: 301 FIEASLKA 308


>gi|296134391|ref|YP_003641638.1| peptide chain release factor 1 [Thermincola sp. JR]
 gi|296032969|gb|ADG83737.1| peptide chain release factor 1 [Thermincola potens JR]
          Length = 355

 Score =  236 bits (602), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 112/347 (32%), Positives = 180/347 (51%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  ++   L+    DP +  +  + +   +    L   +S  +E +  L       EL
Sbjct: 5   LQSLEEKYEELSKLIADPEIIADQSQWQRHAKAHAALTEIVSTYREYKSVLKGIDEAKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             ++ D    +     L  +K + E      +   L     D  +  +E+  GAGG E+ 
Sbjct: 65  LKDQLDSEFREMVEQELAELKEKEEKLSVQLKILLLPKDPNDEKNVIMEIRGGAGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE + +KTE L  +  +  G K    LI+G  AY  LK E GVHR+ 
Sbjct: 125 LFAGDLFRMYSRYAEAKGWKTEILSSNPTDIGGFKEIIFLIEGQGAYSRLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS  ++ V P   + ++++I  +D RID + +SG GGQ VNTT SAVR
Sbjct: 185 RVPTTESSGRIHTSTVTVAVLP-EAEEVDVDIDPNDLRIDVFCSSGPGGQSVNTTQSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+VV CQ E+SQHKNK +A  +LRA+L +   +++     +  + K+++G G  
Sbjct: 244 VTHIPTGIVVSCQDEKSQHKNKEKALRVLRARLLDKAQEEQR--NQLASTRKSQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       VL+GDLD+ ++A +   +
Sbjct: 302 SERIRTYNF-PQGRVTDHRIGLTLHKLDMVLEGDLDEIIEALITTDQ 347


>gi|297543676|ref|YP_003675978.1| peptide chain release factor 1 [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296841451|gb|ADH59967.1| peptide chain release factor 1 [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 356

 Score =  236 bits (602), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 121/346 (34%), Positives = 192/346 (55%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72
                 R   L+ K  DP++  NV E +  ++E   ++  +   +E +  + D      L
Sbjct: 5   LQAIEDRYVELSQKISDPNIISNVGEWRKYVKEHAAIEEIVLKYREYKKVVEDINSTKEL 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L    +E      +E S   ++ +  +E  +   +     D  +  +E+ AGAGG E+  
Sbjct: 65  LSSDEKELREMAEEELSHLEEKKEELLEEIKILLIPKDPNDEKNVIMEIRAGAGGEEAAL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A+ L RMY+ +AEK+ +K E +  ++ +  G K   L I G  AY  LK E GVHR+ R
Sbjct: 125 FAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGAYSRLKYESGVHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P   + +++EI+ +D RID +R+ G GGQ VNTTDSAVR+
Sbjct: 185 VPTTEAGGRIHTSTATVAVLP-EVEEVDVEINPNDIRIDVFRSGGHGGQSVNTTDSAVRV 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV CQ ERSQ +N+ +A  +LRAKLYE+ LQ++++   I E  K+++G G   
Sbjct: 244 THIPTGIVVTCQDERSQLQNRERALKILRAKLYEMALQEQQKE--IAEVRKSQVGTGERS 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +      +VLDGDLD+ + A +   +
Sbjct: 302 ERIRTYNF-PQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALILNDQ 346


>gi|323486285|ref|ZP_08091611.1| hypothetical protein HMPREF9474_03362 [Clostridium symbiosum
           WAL-14163]
 gi|323693924|ref|ZP_08108111.1| peptide chain release factor 1 [Clostridium symbiosum WAL-14673]
 gi|323400395|gb|EGA92767.1| hypothetical protein HMPREF9474_03362 [Clostridium symbiosum
           WAL-14163]
 gi|323502021|gb|EGB17896.1| peptide chain release factor 1 [Clostridium symbiosum WAL-14673]
          Length = 357

 Score =  236 bits (602), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 117/351 (33%), Positives = 187/351 (53%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D+ + R   L  +   P +  +    + LM+E+  L   +   KE +    D   
Sbjct: 1   MFDRLDDLLIRYEELLEELNSPDVAMDQNRFRKLMKEQADLTPLVDAYKEYKKANQDVED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            L L  EE D  +     + L   K  +E  +       L     D  +  +E+ AGAGG
Sbjct: 61  SLALLEEESDEEMRDMAKEELADAKKRIEEMEQQLKILLLPKDPNDDKNVMVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A+ L RMY  +AE  ++KTE + +++    G K    ++ G  AY  +K E GV
Sbjct: 121 DEAALFASELYRMYVHFAESNRWKTELVSVNENGIGGFKEVVFMVTGQGAYSKMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +S+ V P  ++   + I + D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTASVAVMPEAEEFDVV-IDDKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+V+  Q E+SQ +NK +A+ +LR+KLY++EL+KR+      E  +++IG
Sbjct: 240 SAVRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDMELEKRQ--NQEAEERRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V + R  +       V++G+L++ + + +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTEHRIKLTLYKIDSVMNGELNELIDSLIAADQ 347


>gi|166031017|ref|ZP_02233846.1| hypothetical protein DORFOR_00698 [Dorea formicigenerans ATCC
           27755]
 gi|166029284|gb|EDR48041.1| hypothetical protein DORFOR_00698 [Dorea formicigenerans ATCC
           27755]
          Length = 318

 Score =  236 bits (602), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 154/308 (50%), Positives = 210/308 (68%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+E + L   +  I  +     D   L+E+  EE+D S+++E   ++   + + E  + E
Sbjct: 1   MKELKDLQEHLKVIHALYSEYDDICTLIEMVDEEEDRSMVKEIEKDIAHFEEDFEKLRIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGE DS +A + +HAG GGTE+ DW NML RMYTRW + + F  + L+  DG+  GI
Sbjct: 61  TLLSGEYDSCNAIMTLHAGTGGTEACDWVNMLYRMYTRWFQTKGFSVQVLDYLDGDITGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T  + G NAYG+LK E+GVHRLVRISP++S  +R TSF+S  V P +++ I+I+I E
Sbjct: 121 KNITFEVVGDNAYGYLKSEKGVHRLVRISPFNSAGKRQTSFASCDVVPDIEEDIDIDILE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D +IDTYRASGAGGQHVN T SA+RITH+PTG+VVQCQ ERSQH NK +A  ML+AKL 
Sbjct: 181 DDLKIDTYRASGAGGQHVNKTSSAIRITHLPTGIVVQCQNERSQHHNKEKAMQMLKAKLK 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            L+ Q++ E  +       +IG+G QIRSYV+QPY +VKD RTN+E  + + VLDGDLD 
Sbjct: 241 LLQEQEQAEKVSDIRGEVKDIGFGNQIRSYVMQPYTLVKDHRTNVENGNVTAVLDGDLDM 300

Query: 346 FMKATLAI 353
           F+ A L  
Sbjct: 301 FINAYLKY 308


>gi|169333846|ref|ZP_02861039.1| hypothetical protein ANASTE_00232 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259411|gb|EDS73377.1| hypothetical protein ANASTE_00232 [Anaerofustis stercorihominis DSM
           17244]
          Length = 355

 Score =  236 bits (602), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 122/351 (34%), Positives = 192/351 (54%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D   +  +R + ++    +P +  N      L++E  HL+  +   K+  D +     
Sbjct: 1   MLDKLKSIEKRFNEVSEDISNPDIINNHELYTELIKEHSHLEPIVIAYKKYADVMEQLES 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             E+  + DD    +   +++  +  + E  +       +     D  +  +E+ AG GG
Sbjct: 61  NKEMLNDSDDDDFKEMILEDISSLNEQKEGLEQEIKILLIPKDPNDDKNVIVEIRAGVGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  LLRMYTR+AE+ ++K E L  ++    G K A   I+G  AY  LK E G 
Sbjct: 121 DEAALFAGDLLRMYTRYAERNRWKVEMLSTNEIGIGGYKEAVFSIQGKGAYSRLKYESGT 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S+ R HTS  ++ V P   + +E+ I  +D RID YR+SG GGQ VNTTD
Sbjct: 181 HRVQRIPDTESSGRIHTSAITVAVLP-EAEDVEVNIDPNDLRIDVYRSSGNGGQSVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIP+G+VV CQ E+SQ KNK +A  +L+A+L+E+E +K++E   I  + K++IG
Sbjct: 240 SAVRITHIPSGLVVACQDEKSQLKNKDKALKILKARLFEIEQRKQQE--AIASNRKSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +     +DVLDGD+D+F+   +   +
Sbjct: 298 SGDRSERIRTYNF-PQGRVTDHRVGLTLYKLNDVLDGDIDEFIDTLIVQDQ 347


>gi|91976917|ref|YP_569576.1| peptide chain release factor 2 [Rhodopseudomonas palustris BisB5]
 gi|91683373|gb|ABE39675.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodopseudomonas
           palustris BisB5]
          Length = 322

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 201/309 (65%), Positives = 251/309 (81%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L++A++ I +++  L DN+ ++EL   E D  ++ E    L+ +K EV  ++ E
Sbjct: 1   MQERTSLEDALTGIGKVERELTDNVEMIELGEAEGDDGVVSEAEAALKALKKEVARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D+YLEVHAGAGGTESQDWA+MLLRMYTRWAEK  FK E LE  +GEEAGI
Sbjct: 61  ALLSGEADRFDSYLEVHAGAGGTESQDWASMLLRMYTRWAEKHGFKIEYLEESEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PV+D+SI+I+I+E
Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDNSIKIDIAE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ +  + VLDGDLD+
Sbjct: 241 EIELKKREEQAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300

Query: 346 FMKATLAIK 354
           FM ATLA +
Sbjct: 301 FMAATLAQR 309


>gi|225027777|ref|ZP_03716969.1| hypothetical protein EUBHAL_02036 [Eubacterium hallii DSM 3353]
 gi|224954923|gb|EEG36132.1| hypothetical protein EUBHAL_02036 [Eubacterium hallii DSM 3353]
          Length = 359

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 122/351 (34%), Positives = 192/351 (54%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ V+RL  +  +  +P +  +    + LM+E+  L   +   KE ++       
Sbjct: 1   MFDKLEDLVKRLDEVMQELSEPDVVSDQNRFRNLMKEQNELAPIVEKYKEYKEAKQTIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
            +E+  EE D  + +   + L   K  VE  + E           D  +  +E+ AGAGG
Sbjct: 61  SVEMLEEEHDEEMRELLKEELSEAKKNVEQYEEELKVLLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE +++KTE +++++    G K  + +I G  AY  LK E GV
Sbjct: 121 DEAALFAAEIYRMYKNYAESKRWKTEFIDVNENGIGGFKEVSFMINGQGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS  ++ + P   + +++++  +DCR D +RASG GGQ VNTTD
Sbjct: 181 HRVQRIPATESGGRIHTSTITVAIMP-EAEEVDVQLDMNDCRFDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+ CQ E+SQ KNK +A  +LRA+LY+LE  K        E  K++IG
Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKAIKVLRARLYDLEQSK--AHDAEAELRKSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +      D+L+GDLD+ + +  A  +
Sbjct: 298 TGDRAEKIRTYNF-PQGRVTDHRIKLTLHRLDDILNGDLDEIIDSLTAADQ 347


>gi|300853434|ref|YP_003778418.1| peptide chain release factor 1 [Clostridium ljungdahlii DSM 13528]
 gi|300433549|gb|ADK13316.1| peptide chain release factor 1 (RF-1) [Clostridium ljungdahlii DSM
           13528]
          Length = 357

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 189/347 (54%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    +   L+ K  DP +  +  E + L +E   L+  ++  +E +    +     E+
Sbjct: 5   LNFIENKYEELSIKISDPQVMADQKEWQKLCKENAELEEIVTKYREYKKAQQELEDNKEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  + +   + ++R+   +E  +       L     D  + ++E+ AGAGG E+ 
Sbjct: 65  LKEETDREMKEMEQEEIKRLTEVIEESENDLRVLLLPKDPNDDKNVFVEIRAGAGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE++ +  E + I+  +  G K    ++KG  AY  LK E G HR+ 
Sbjct: 125 LFAANLTRMYTRYAERQAWNIETMSINATDIGGFKEIVFMVKGKGAYSRLKYESGTHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P   D +++ I+ +D RID +RASG GGQ VNTTDSAVR
Sbjct: 185 RVPDTESSGRIHTSTATVAVLP-EVDDVDVVINPNDIRIDVFRASGHGGQCVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ E+SQ KNK +   +L+++LY  E  ++E  A+I E  K+++G G  
Sbjct: 244 ITHLPTGLVVSCQDEKSQLKNKEKGMKVLKSRLY--ERAEKERSASIAEDRKSQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +        LDG++D+ + A +   +
Sbjct: 302 SERIRTYNY-PQGRVTDHRIGLTLYKLDSFLDGNIDEIIDALITADQ 347


>gi|298706071|emb|CBJ29181.1| peptide chain release factor [Ectocarpus siliculosus]
          Length = 789

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 124/356 (34%), Positives = 195/356 (54%), Gaps = 7/356 (1%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +L     LFD       L +L   + +   W +   A+  + +   L   +  +   +
Sbjct: 98  RERLGKNRQLFDEAKLEGELEYLEGVSSEAEFWNDANSARKTLGDLNRLKLQLDRLHRWR 157

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAY 118
               D   ++EL  EE+          +         + +++  + + LLSG+ D+    
Sbjct: 158 GWEADAETVIELCGEEEGGDEETVAMLDEAMEALQLLQRDLDAWELQQLLSGKYDNCGCR 217

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           L + AGAGGTE+QDWA ML RMY R+ ++R FK + +E   GE AGIKS  + ++G  AY
Sbjct: 218 LTIMAGAGGTEAQDWAEMLQRMYIRFFQRRGFKYKMVEEESGEVAGIKSCEMQVEGDFAY 277

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI--EIEISESDCRIDTYRAS 236
           G+L GE+G HRLVR SP+++ ++R TSF+ +  +P+++     ++ + E +  + T R+ 
Sbjct: 278 GYLAGEKGTHRLVRQSPFNAQAKRQTSFAGVESFPIIEQDDLSDLVVPEGELEVSTMRSG 337

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G+GGQ+VN  ++ VR+ HIPTG+ V+C QERSQ  NK  A NML+ KL  +  +++    
Sbjct: 338 GSGGQNVNKVETGVRMKHIPTGIAVRCTQERSQMLNKELALNMLKEKLVVVMQEQQTRDL 397

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                   E  WG+QIR+YV  PY++VKD RT  E     DV+DGDLD  ++A L 
Sbjct: 398 AEIRGDMVEASWGQQIRNYVFHPYKLVKDTRTGAETVQVQDVMDGDLDALIEAYLR 453


>gi|255280026|ref|ZP_05344581.1| peptide chain release factor 1 [Bryantella formatexigens DSM 14469]
 gi|255269117|gb|EET62322.1| peptide chain release factor 1 [Bryantella formatexigens DSM 14469]
          Length = 357

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 116/351 (33%), Positives = 185/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + R   L  +  +P +  +    + LM+E+ +L   +   KE ++       
Sbjct: 1   MFDKLEDLLIRFEELLNELNEPGVASDPAHFQKLMKEQGNLQPIVDAYKEYKECKKTVED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            L +   E D  + +   + L   K  +   +       L     D  +  +E+ AGAGG
Sbjct: 61  SLAMLDGESDEEMREMLKEELNTAKDRIAELETELKILLLPKDPNDDKNVIMEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + R+Y ++AEKR+++ E L   +    G+K    +I G  AY  LK E GV
Sbjct: 121 DEAALFAAEMYRLYVKYAEKRRWRVELLNADEIGIGGMKEVNFMITGQGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + +++ I E D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTVTVAVMP-EAEEVDVVIDEKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+VV  Q E+SQ +NKA+A+ +LRAKLY++E QK        +  +++IG
Sbjct: 240 SAVRLTHYPTGIVVYSQTEKSQLQNKAKAFALLRAKLYDIEQQK--AHDAEAQLRRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       ++DGD+D+ + + +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLYKLDSIMDGDIDELLDSLIAADQ 347


>gi|254428729|ref|ZP_05042436.1| peptide chain release factor 1 [Alcanivorax sp. DG881]
 gi|196194898|gb|EDX89857.1| peptide chain release factor 1 [Alcanivorax sp. DG881]
          Length = 361

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 120/346 (34%), Positives = 175/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     DP +  N  + + L RE   +D  +   +       +      +
Sbjct: 9   LDKLADRFEELAGLLSDPDVIGNQNQFRDLSREYAEIDPVVKCYQAYLQAADNLDAARAM 68

Query: 76  ALEEDDCSILQETSDNLQ---RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +      R++   E  Q   L     D  + +LEV AG GG E+  
Sbjct: 69  QDDSDPDMREMGAEEARDAQARMEELAEELQKLMLPKDPRDGANVFLEVRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++A++R +K E +   +GE  G K     + G   Y  +K E G HR+ R
Sbjct: 129 FAGDLFRMYSKYADQRGWKVEMVSASEGEHGGYKEVIARVIGDGVYSRMKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ +    +   +I I   D RIDTYR+SGAGGQHVNTTDSAVRI
Sbjct: 189 VPATESQGRIHTSACTVAIMAEAEQLGDITIRNEDLRIDTYRSSGAGGQHVNTTDSAVRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTGVVV+CQ ERSQHKNKA+A ++L AKLY+   Q+    A      K+ +G G   
Sbjct: 249 THLPTGVVVECQDERSQHKNKARAMSLLSAKLYDA--QQNAAHAEQAAERKSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+      ++++GD+D+ + A LA  +
Sbjct: 307 ERIRTYNY-PQGRVSDHRINLTLYRLGELMEGDMDELLGALLAEYQ 351


>gi|268592708|ref|ZP_06126929.1| peptide chain release factor 1 [Providencia rettgeri DSM 1131]
 gi|291311851|gb|EFE52304.1| peptide chain release factor 1 [Providencia rettgeri DSM 1131]
          Length = 360

 Score =  236 bits (601), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 116/340 (34%), Positives = 177/340 (52%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L +E   L +        +    D      L
Sbjct: 9   LEALQERYEEIEAHLADAGVIADQDRFRALSKEYAQLSDVAKCFSAWRTVQDDIETAEML 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE       R +   +  Q   L     D  + ++E+ AGAGG E+  +A
Sbjct: 69  LDDPEMKEMAQEELKEAKARNEELEQQLQLLLLPKDPDDEYNCFVEIRAGAGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE  +++ E +   DGE  G K     I G + YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAENNRWRVELMSTSDGEHGGFKEVIAKISGDSVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P + ++   EIS +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAILPELPEAELPEISPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ ERSQHKNKA+A ++L A++ + E+ KR+  A      +  +G G    +
Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLGARIRQAEMDKRQ--AAEASERRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IR+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDSLIQPII 345


>gi|167627296|ref|YP_001677796.1| peptide chain release factor 1 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|189039973|sp|B0TX37|RF1_FRAP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|167597297|gb|ABZ87295.1| peptide chain release factor 1 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 361

 Score =  236 bits (601), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 114/346 (32%), Positives = 184/346 (53%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   ++    + ++  +  + + L +E  HL+  +   KE    L D     E+
Sbjct: 9   LQSLIERHEEVSALLGEANVISDQNKFRDLSKEYSHLEPIVMAFKEYTQALEDKEAAYEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D   +     +     +         Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LNEKDAELVEMAKEELKSANESIERLEDELQILLLPRDPNDDANIFLEIRAGTGGDEASI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L +MY+++AE+R +K E +   +GE  G K     I G   Y  LK E G HR+ R
Sbjct: 129 FSGDLFKMYSKYAEQRGWKIEVVSASEGEHGGYKEIISRIYGDGVYSQLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   I+I+ +D ++DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTGVVV+CQ +RSQHKN+A A +ML++KL + E+ K+++     ++ K  +G G   
Sbjct: 249 THIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQ--SDTRKNLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+      +V++G LD  ++  +   +
Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLDEVMEGSLDSIIQPLILEHQ 351


>gi|261392089|emb|CAX49586.1| peptide chain release factor I (RF-1) [Neisseria meningitidis 8013]
          Length = 358

 Score =  236 bits (601), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 120/349 (34%), Positives = 174/349 (49%), Gaps = 8/349 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +       RL  +           ++   + L RE   L   +   +  +    D  
Sbjct: 4   SILEKLQQLGDRLEEVTHLLGQSEATADMDNYRKLTREHAELTPVVEVFQNYRLAQSDLA 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E+  + +      E  +  +          Q   L     D  + ++EV AG GG E
Sbjct: 64  DAEEMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEVRAGTGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLRMY+R+AE+ +++ E +  ++ E  G K     I G  AY  LK E G HR
Sbjct: 124 AALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ V P  D+  +IE++ +D RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G
Sbjct: 244 VRITHLPTGMVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V+DGDL +   A +A  +
Sbjct: 302 DRSERIRTYNY-PQGRVTDHRINLTLHKLDFVMDGDLAEITDALIAEHQ 349


>gi|86750123|ref|YP_486619.1| peptide chain release factor 2 [Rhodopseudomonas palustris HaA2]
 gi|86573151|gb|ABD07708.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodopseudomonas
           palustris HaA2]
          Length = 322

 Score =  236 bits (601), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 199/309 (64%), Positives = 251/309 (81%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L+++++ I +++  L DN+ ++EL   E D  +++E    L+ +K EV  ++ E
Sbjct: 1   MQERTSLEDSLTGIGKVERELSDNIEMIELGEAEGDEGVVREAEAALKALKKEVARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWA+MLLRMYTRWAEK  FK E LE  +GEEAGI
Sbjct: 61  ALLSGEADRFDTYLEVHAGAGGTESQDWASMLLRMYTRWAEKHGFKVEYLEESEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PV+D+SI+I+I+E
Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDNSIKIDIAE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R+DT R+ GAGGQHVN T+SAVR+TH+PTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHVPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ +  + VLDGDLD+
Sbjct: 241 EIELKKREEQAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300

Query: 346 FMKATLAIK 354
           FM ATLA +
Sbjct: 301 FMAATLAQR 309


>gi|325860237|ref|ZP_08173362.1| putative peptide chain release factor 2 [Prevotella denticola CRIS
           18C-A]
 gi|325482324|gb|EGC85332.1| putative peptide chain release factor 2 [Prevotella denticola CRIS
           18C-A]
          Length = 371

 Score =  236 bits (601), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 124/359 (34%), Positives = 204/359 (56%), Gaps = 12/359 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  + + L    D D           +T+ P  W +   A+  M++ + ++  I    E 
Sbjct: 10  IQVRTDALHRYLDIDRKRIEFEEEQLRTQAPDFWDDPKRAQEQMKKVKDIEKWIKGYDEA 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +     D+    +E      +    +E  + +++L  E D  +  ++++
Sbjct: 70  RSLTEETQLAFDFYK--DELVTEEEVDAAYAKALKVIEDLELKNMLRQEEDPMECVMKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWL 181
           +GAGGTESQDWA+ML+RMY RW E   +K    +I +G+EAGIKS T+  + G  AYG+L
Sbjct: 128 SGAGGTESQDWASMLMRMYMRWGEAHGYKVTVSDIQEGDEAGIKSVTMKFEGGEYAYGYL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SP+++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ
Sbjct: 188 KSENGVHRLVRVSPFNAQGKRMTSFASVFVTPLVDDTIEVYVDPARVSWDTFRSSGAGGQ 247

Query: 242 HVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  +S VR+ +            ++++  + R Q KN+A+A  +L+++LY+  ++KR 
Sbjct: 248 NVNKVESGVRLRYQYEDPDTGEQEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRI 307

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           E     E+ K +I WG QIRSYV    + VKD RTN + +    V+DG +D F+KA L 
Sbjct: 308 EEQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKIDAFIKAYLM 365


>gi|313896150|ref|ZP_07829704.1| peptide chain release factor 1 [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|312975575|gb|EFR41036.1| peptide chain release factor 1 [Selenomonas sp. oral taxon 137 str.
           F0430]
          Length = 354

 Score =  236 bits (601), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 110/346 (31%), Positives = 177/346 (51%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---DNLIL 72
                 +   L     DP +  ++   +   RE   L   ++  +  +       ++  +
Sbjct: 5   LTAVADKYRELEALLSDPAVMADMARWQRYTREHAALTPIVTAYEAYRKAEETVAEDKEM 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L  A  E    +L+E +      +   E      L     D  +  +E+  G GG E+  
Sbjct: 65  LAEADAEMKELLLEEIAAAEAERERLAEELPILLLPRDPNDDKNVIVEIRGGVGGEEAAL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY R+AE++ ++TE L  ++ E  G K  + L+ G  AY  LK E G HR+ R
Sbjct: 125 FAASLFRMYARYAERQGWRTEILSSNETEIGGFKEISFLVTGAGAYSKLKYESGTHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           I   +S  R HTS  ++ V P   + +E+ I  +D RIDTY ASGAGGQ+VN T++A+RI
Sbjct: 185 IPVTESGGRIHTSAVTVAVLP-EAEDVEVTIDPNDLRIDTYCASGAGGQYVNRTETAIRI 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VVQCQ E+SQ KNK +A  +LRA++Y+    ++E+   +    ++++G G   
Sbjct: 244 THLPTGIVVQCQDEKSQLKNKEKAMKVLRARIYD--RAQQEQADAVAADRRSQVGSGDRS 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       VLDG+L++ + A +   +
Sbjct: 302 ERIRTYNF-PQGRVTDHRIGLTLYKIDAVLDGELEELLAALITADQ 346


>gi|315655086|ref|ZP_07907988.1| peptide chain release factor RF2 [Mobiluncus curtisii ATCC 51333]
 gi|315490567|gb|EFU80190.1| peptide chain release factor RF2 [Mobiluncus curtisii ATCC 51333]
          Length = 376

 Score =  236 bits (601), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 133/357 (37%), Positives = 211/357 (59%), Gaps = 4/357 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL      +  + D +   Q+++ L  +   P LW +   A+ + +        +  +++
Sbjct: 13  KLRASFATISAVMDPELLTQKIADLTQQAAAPDLWDDQEHAQKVTQSLSAAQVDMQRLQK 72

Query: 62  IQDRLCDNLILLELALEE---DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           ++ R+ D   L+EL  EE   D  +IL +     + +K +++  + ++LL+GE D   A 
Sbjct: 73  MRARIDDMEALVELGAEEAGEDRDAILADAEQTYETLKQDLDAMEVKTLLNGEYDERFAV 132

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + + +GAGG ++ D+A MLLRMY R+ E+  + T+ L+    EEAGIKS T  +  P AY
Sbjct: 133 VTIRSGAGGVDAADFAQMLLRMYLRYCERHHYATKVLDTSYAEEAGIKSVTFQVDAPYAY 192

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L  E G HRL R+SP+++  +R TSF+++ V P+++ +  IE+ ESD +ID +R+SG 
Sbjct: 193 GMLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLIETTDHIEVPESDIKIDVFRSSGP 252

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVR+TH+PTG+V+  Q E+SQ +N+A A  +L+++L  L  Q+  +    
Sbjct: 253 GGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLMLRHQQEHDKKKE 312

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                 +  WG Q+RSY L   Q+VKDLRT  E  +P  V DGDLD F+ A +  +K
Sbjct: 313 LAGD-VKASWGDQMRSYFLYGQQLVKDLRTGYESGNPDSVFDGDLDGFIDAAIRWRK 368


>gi|145634872|ref|ZP_01790579.1| peptide chain release factor 1 [Haemophilus influenzae PittAA]
 gi|145267738|gb|EDK07735.1| peptide chain release factor 1 [Haemophilus influenzae PittAA]
          Length = 361

 Score =  236 bits (601), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 181/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     D  +  +  + +   +E   L+  +           +      L
Sbjct: 10  LESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQNIEEAEIL 69

Query: 76  ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q   +  +  I+   +  Q   L     D  + YLE+ AG GG E+  +A
Sbjct: 70  LDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 129

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG LK E G HR+ R+ 
Sbjct: 130 GDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGEGVYGQLKFESGGHRVQRVP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 190 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 249

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++       +  +  +G G +   
Sbjct: 250 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQ--TDMRRNLLGSGDRSDK 307

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      +V++G +D+ ++  +   +
Sbjct: 308 IRTYNY-PQGRVTDHRINLTIYRLDEVINGKIDELIQPIITEYQ 350


>gi|225621552|ref|YP_002722811.1| peptide chain release factor 2 [Brachyspira hyodysenteriae WA1]
 gi|225216373|gb|ACN85107.1| peptide chain release factor 2 [Brachyspira hyodysenteriae WA1]
          Length = 312

 Score =  236 bits (601), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 156/309 (50%), Positives = 213/309 (68%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L + I  ++ +     +   L+E+A+E +D  + +E       ++   +  + +
Sbjct: 1   MKERMLLLDKIEPVENLIKNSNNIYELVEMAIESNDSEMEKELETECLELQKVFDELETK 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +L SGE DS +AYL ++AGAGGTES DWA+ML RMY R+ E+  F  E  +   G+EAGI
Sbjct: 61  NLFSGEFDSKNAYLTLNAGAGGTESCDWASMLSRMYVRFCERHGFTVETTDELPGDEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K  +  ++G  AYG+L+ E GVHRLVRISP+D+N++RHTSF ++ V P +D+ IEIEI+ 
Sbjct: 121 KQISFYVQGLYAYGYLRSEIGVHRLVRISPFDANAKRHTSFVAVSVMPDIDEDIEIEINP 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTYRASGAGGQHVN T SA+RITHIPT +VVQCQ ERSQH NK  A  ML+AKLY
Sbjct: 181 ADLRIDTYRASGAGGQHVNKTSSAIRITHIPTNIVVQCQAERSQHNNKDMAMKMLKAKLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           +LE +K ++        KT+I WG QIRSYV QPYQMVKDLRT  E  + + V+DG++D+
Sbjct: 241 QLEKEKLDKEKQKIAGEKTDIAWGNQIRSYVFQPYQMVKDLRTGCESGNMNSVMDGNIDE 300

Query: 346 FMKATLAIK 354
           F+ A L  +
Sbjct: 301 FISAYLKQQ 309


>gi|50842838|ref|YP_056065.1| peptide chain release factor 2 [Propionibacterium acnes KPA171202]
 gi|289426937|ref|ZP_06428661.1| peptide chain release factor 2 [Propionibacterium acnes J165]
 gi|295130890|ref|YP_003581553.1| peptide chain release factor 2 [Propionibacterium acnes SK137]
 gi|81611548|sp|Q6A808|RF2_PROAC RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|50840440|gb|AAT83107.1| peptide chain release factor 2 [Propionibacterium acnes KPA171202]
 gi|289159877|gb|EFD08057.1| peptide chain release factor 2 [Propionibacterium acnes J165]
 gi|291375816|gb|ADD99670.1| peptide chain release factor 2 [Propionibacterium acnes SK137]
 gi|332675771|gb|AEE72587.1| peptide chain release factor 2 [Propionibacterium acnes 266]
          Length = 368

 Score =  236 bits (601), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 221/353 (62%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D +     ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 13  LDASLSSIENVLDPEAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A  +DD   L E +    +++ E++  +  +LLSG+ D  +A + + 
Sbjct: 73  RARIEDVHVLLEFAAADDDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RW+E+  +K E L+    EEAGIKSAT ++  P AYG L 
Sbjct: 133 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 193 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL E   +++E   N  +S 
Sbjct: 253 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSE 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRTN E  +   V DGD+DDF+ A +  ++
Sbjct: 313 GN--SWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 363


>gi|85715460|ref|ZP_01046441.1| peptide chain release factor 2 [Nitrobacter sp. Nb-311A]
 gi|85697655|gb|EAQ35531.1| peptide chain release factor 2 [Nitrobacter sp. Nb-311A]
          Length = 322

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 201/309 (65%), Positives = 249/309 (80%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L+++++ I +++  L D + ++EL   E+D +++ E+ + L+ ++ EV  ++ E
Sbjct: 1   MQERTSLEDSLTGIGKVERELEDQIGMIELGEAENDQAVITESENALKTLRKEVARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWA MLLRMY RWAEKR FK E LE   GEEAGI
Sbjct: 61  ALLSGEADRFDTYLEVHAGAGGTESQDWAQMLLRMYARWAEKRGFKVEYLEETPGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PVVDDSI+I+I E
Sbjct: 121 KSATVQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVVDDSIKIDIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ +  S VLDGDLD+
Sbjct: 241 EIELKKREEQAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300

Query: 346 FMKATLAIK 354
           FM ATLA +
Sbjct: 301 FMAATLAQR 309


>gi|237799727|ref|ZP_04588188.1| peptide chain release factor 1 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331022582|gb|EGI02639.1| peptide chain release factor 1 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 360

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 117/346 (33%), Positives = 175/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  ++  K++     D      L
Sbjct: 9   LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYKQLIKVQADLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +  +  +         Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LKDSDPDMRDMAVEEVRETKQQLVDLEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+P+G+VV+CQ+ERSQHKN+A+A + L AKL +   Q       I    K  +G G   
Sbjct: 249 THLPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAANAIASERKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+   S  +VL G +D  ++  LA  +
Sbjct: 307 ERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQ 351


>gi|71065612|ref|YP_264339.1| peptide chain release factor 1 [Psychrobacter arcticus 273-4]
 gi|119361583|sp|Q4FSV3|RF1_PSYA2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71038597|gb|AAZ18905.1| bacterial peptide chain release factor 1 (bRF-1) [Psychrobacter
           arcticus 273-4]
          Length = 362

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 179/347 (51%), Gaps = 10/347 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   +     DP +  +  + + L  E   L +  +  +       D      +
Sbjct: 9   LDQMVDRYEEVTALLSDPSVINDNNKFRELSVEHSDLMDITTLWQNYVGAETDQADAEAM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E  D  + +   + +   +  +   +       L     D   A+LE+ AG GG E+ 
Sbjct: 69  LKEASDPDMKEMMQEEIDSARDTIVEMEEALNVMMLPKDPNDKVPAFLEIRAGTGGDEAA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY ++A+ + +  E L  ++GE  G K     + G + YG LK E GVHR+ 
Sbjct: 129 IFSGDLFRMYQKYAQAQGWTLEVLSANEGEHGGYKEIITRVSGNSVYGRLKFESGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V+    + ++ +D R DT+R+SGAGGQHVNTTDSAVR
Sbjct: 189 RVPDTESQGRVHTSACTVAVMPEVEIDDTVNLNPADIRFDTFRSSGAGGQHVNTTDSAVR 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG VV+CQQERSQHKN+AQA  ML +K+ ++++Q + + A+     +  +G G  
Sbjct: 249 LTHIPTGTVVECQQERSQHKNRAQAMKMLISKIQQVKVQAQVDAADTI--RRDLVGSGDR 306

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R N+       +++GDLD+ + A L   +
Sbjct: 307 SERIRTYNF-PQGRMTDHRINLTLYKLDSIMEGDLDEILDALLREHQ 352


>gi|260438934|ref|ZP_05792750.1| peptide chain release factor 1 [Butyrivibrio crossotus DSM 2876]
 gi|292808585|gb|EFF67790.1| peptide chain release factor 1 [Butyrivibrio crossotus DSM 2876]
          Length = 358

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 117/351 (33%), Positives = 185/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +  + +   +N +   P +  +    + LM+E+  L   +      +    D   
Sbjct: 1   MFENLEEILIKYEDINMELASPDVTSDQRRFRNLMKEQSDLTPLVEAYTAYKKANQDIKD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            LE+  EE+D  + +   + L   K +V   +       L     D  +  +E+ AGAGG
Sbjct: 61  SLEMLEEENDEEMREMLKEELSSAKDKVAELEEKIKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYT +AE R++K E +   +    G+K    ++ G  AY  LK E GV
Sbjct: 121 DEAALFAAELFRMYTHYAEARRWKVEVVNSDETGIGGMKEVEFMVTGQGAYSVLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +S+ V P   + +E++I E D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTASVAVMP-EAEEVEVQIDEKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LRAKLY++E QK        ++ +++IG
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQIQNKEKAFALLRAKLYDMECQK--AHDAEADARRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+GD+ + + A +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIGLTLYKLDKILNGDIQEIIDACIAADQ 347


>gi|42522998|ref|NP_968378.1| hypothetical protein Bd1489 [Bdellovibrio bacteriovorus HD100]
 gi|39575203|emb|CAE79371.1| prfB [Bdellovibrio bacteriovorus HD100]
          Length = 321

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 164/311 (52%), Positives = 219/311 (70%)

Query: 42  AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101
            + L +E+  L+ A+        RL D+ +LLE+A E  D     E    +  ++   E 
Sbjct: 1   MQKLNKEKALLEKAVGEFDAFASRLSDSKVLLEMAEEAQDEGSFSEAKAEVVALEKLGEE 60

Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
            + + +L+GE DSN +YL +++GAGGTES DWA+MLLRMYTR+A+K  FK + +E+ +GE
Sbjct: 61  LELKRVLNGELDSNSSYLSINSGAGGTESCDWASMLLRMYTRYADKHGFKVQIIEMTEGE 120

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
            AGIKS TLLI+GP AYG+LK E GVHRLVRISP+DSN+RRHTSF+S++ +  VDD I I
Sbjct: 121 GAGIKSCTLLIEGPYAYGYLKAESGVHRLVRISPFDSNARRHTSFASVFAWAEVDDDINI 180

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           E+   D ++DT+RASGAGGQHVN TDSAVR+THIP+GV+V CQ ERSQ +N+ +A  ML+
Sbjct: 181 EVRPDDLKVDTFRASGAGGQHVNRTDSAVRMTHIPSGVIVTCQVERSQIQNREKALKMLK 240

Query: 282 AKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           A+LYE+E++KR    +   S K    WG QIRSYV+ PYQMVKD RT+ E     DV+DG
Sbjct: 241 ARLYEMEIEKRNAEKDAMNSQKKANEWGSQIRSYVMHPYQMVKDHRTDFETNQVDDVMDG 300

Query: 342 DLDDFMKATLA 352
           DLD F+ + L 
Sbjct: 301 DLDGFIMSYLK 311


>gi|323466941|gb|ADX70628.1| Peptide chain release factor 2 [Lactobacillus helveticus H10]
          Length = 332

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 152/324 (46%), Positives = 202/324 (62%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +   A+ L+ +   L        ++Q    D L  LEL   E D  + QE  
Sbjct: 1   MMQPGFWDDQEGAQKLISDNNLLKEKRDSFLKLQQDYEDELTALELLRAEPDADLQQEVE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            +L+ ++      + + LLSG+ DS++A LE+H GAGGTE+ DW  ML RMY R+ +   
Sbjct: 61  TDLKDLQEAFHNYELDLLLSGKYDSHNALLEIHPGAGGTEAMDWGQMLFRMYQRYCDAAG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E  +   GEEAG+KS ++ I G NAYG LK E GVHRLVRISP+D+  RRHTSF+S+
Sbjct: 121 FKFEINDYEPGEEAGLKSVSVRISGNNAYGMLKSENGVHRLVRISPFDATKRRHTSFASV 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDSI+I+I   D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ
Sbjct: 181 EVIPEIDDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTTSQAQRSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
            +N+  A N LRAKL+ LE +K+++     +  + EIGWG QIRSYV  PY +VKDLRT 
Sbjct: 241 LQNRETAMNELRAKLFHLEEEKKQKQKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRTG 300

Query: 330 IEKTSPSDVLDGDLDDFMKATLAI 353
            E    + V+DG L  F+ + L  
Sbjct: 301 YETADVNGVMDGKLQPFIYSYLQW 324


>gi|225019405|ref|ZP_03708597.1| hypothetical protein CLOSTMETH_03358 [Clostridium methylpentosum
           DSM 5476]
 gi|224947822|gb|EEG29031.1| hypothetical protein CLOSTMETH_03358 [Clostridium methylpentosum
           DSM 5476]
          Length = 361

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 118/352 (33%), Positives = 186/352 (52%), Gaps = 13/352 (3%)

Query: 13  LFDWDNA-VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +   +R   +N K  DP++  +    + LMRE +HL   I   +E +    +   
Sbjct: 4   IFDKLSLTEKRFDEINEKLMDPNVVNDQHAYRDLMRELKHLTPIIDKYREYKAAKDNLEE 63

Query: 72  LLELALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
             E+  E       +E            I+   E  +   L +   D  D  +E+  GAG
Sbjct: 64  AKEMLSEGGLDKEFKEMVQEQYSESQQAIEDLGEELKILLLPTDPNDDKDVIIEIRGGAG 123

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMYT +AE + +KTE L  ++ E  G K  +  + G  AY  LK E G
Sbjct: 124 GEEAALFAYNLYRMYTMYAEAKGWKTEILSANETELGGFKEVSFEVSGEGAYSRLKFESG 183

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +++ R HTS  ++ V P   + +E +I+ +D ++DT+RASGAGGQHVN T
Sbjct: 184 VHRVQRVPETEASGRIHTSTVTVAVLP-EAEEVEFDINPTDIQVDTFRASGAGGQHVNKT 242

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SA+R+T++PTG+VV+CQ ERSQHKNK +A  +LR +LYE  +  +E    I    K ++
Sbjct: 243 ESAIRLTYLPTGLVVECQDERSQHKNKDKAMKILRTRLYEQAM--KEATDKIASERKAQV 300

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   + D R  +        ++GD+D+ + A +   +
Sbjct: 301 GTGDRSERIRTYNY-PQGRITDHRIGLTLYHLEQNMNGDIDEIIDALITADQ 351


>gi|297618446|ref|YP_003703605.1| peptide chain release factor 1 [Syntrophothermus lipocalidus DSM
           12680]
 gi|297146283|gb|ADI03040.1| peptide chain release factor 1 [Syntrophothermus lipocalidus DSM
           12680]
          Length = 355

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 109/347 (31%), Positives = 183/347 (52%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   ++   +      P +  +    +   +    L   +   +E +    D      +
Sbjct: 5   LDKLEEKFEEITALLSQPEVIADQARFQKYAKAHAELSELVDTYREYKRVRQDKTDARAM 64

Query: 76  ALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE+D  +     + ++    + +   +  +   L     D  +  +E+ AG GG E+ 
Sbjct: 65  LEEEEDDDLRNMLVEEIRVLSDKEEKLEQRLKLLLLPKDPNDEKNVIMEIRAGTGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AEK+ +K + ++    +  G K    +++G  AY  LK E GVHR+ 
Sbjct: 125 LFAADLFRMYSRYAEKQGWKVDIMDTSYSDLGGFKEIIFIVEGRGAYSKLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + +E++I+ +D RID + +SG GGQ VNTT SAVR
Sbjct: 185 RIPVTESGGRIHTSAATVAVLP-EAEEVEVDINPNDLRIDVFCSSGPGGQSVNTTQSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ E+SQHKNK +A  +LR++L  LEL++ E  A I ++ ++++G G  
Sbjct: 244 ITHLPTGIVVSCQDEKSQHKNKDKAMRVLRSRL--LELKRAEHEAEIADARRSQVGSGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R N+       VL+G+LD+ ++A +   +
Sbjct: 302 SERIRTYNF-PQGRVTDHRINLTLHKLDVVLEGELDEIIEALITHDQ 347


>gi|317499018|ref|ZP_07957299.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|291560728|emb|CBL39528.1| bacterial peptide chain release factor 1 (bRF-1)
           [butyrate-producing bacterium SSC/2]
 gi|316893668|gb|EFV15869.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 357

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 121/351 (34%), Positives = 181/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +  V RL  +  +  DP +  N    + LM+E+  L   +   KE +    +   
Sbjct: 1   MFDKLEGLVDRLDTVLQELNDPDVAGNQNRFRDLMKEQNELTPIVEKYKEYKAEKQNIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            L L  EE D  + +   + L   K  VE  +       +     D  +  +E+ AGAGG
Sbjct: 61  SLMLLEEESDEEMKELAKEELNESKANVERLEEELKILLIPKDPMDDKNIIVEMRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +   + RMY  +AE +++K   L  ++    G K    ++ G  AY   K E GV
Sbjct: 121 DEAGLFVADVARMYRNYAESKRWKVNTLSFNESGIGGFKELVFMVSGQGAYSRFKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS  ++ + P   + +E+EI  +DC+ D +RASG GGQ VNTTD
Sbjct: 181 HRVQRIPATESGGRIHTSTITVAIMP-EVEDVEVEIDMNDCKFDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+VV CQ E+SQ KNK +A  +LR++LYELE QK           K++IG
Sbjct: 240 SAVRLTHIPTGIVVSCQDEKSQLKNKDKALKVLRSRLYELEQQK--AHDEEAAKRKSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++GDLD+ + +  A  +
Sbjct: 298 TGDRSEKIRTYNY-PQGRVTDHRIKLTLHKLDSIMNGDLDELIDSLTAADQ 347


>gi|210615399|ref|ZP_03290526.1| hypothetical protein CLONEX_02742 [Clostridium nexile DSM 1787]
 gi|210150248|gb|EEA81257.1| hypothetical protein CLONEX_02742 [Clostridium nexile DSM 1787]
          Length = 313

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 161/309 (52%), Positives = 219/309 (70%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+E + L + +  + ++     D  +L+E+A +E+D S+L E    L   +   E  + +
Sbjct: 1   MKELKSLKDFLEKVSQLTTSYEDIGVLIEMAYDENDESLLPEIESELTAFQQGYEEIRIQ 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGE D ++A + +HAGAGGTES DWANML RMYTRWAE++ F  E L+  DG+ AG+
Sbjct: 61  TLLSGEYDKDNAIVTLHAGAGGTESCDWANMLYRMYTRWAERKGFSVEVLDFLDGDVAGL 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T  + G NAYG+LK E+GVHRLVRISP+++  +R TSF+S  V P ++D I+IE+++
Sbjct: 121 KAVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFASCDVVPDIEDDIDIELND 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D +IDTYRASGAGGQHVN T SA+RITHIPTG+VVQCQ ERSQH NK +A  ML+AKLY
Sbjct: 181 DDLKIDTYRASGAGGQHVNKTSSAIRITHIPTGIVVQCQNERSQHNNKEKAMQMLKAKLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            L+ Q++ E  +       EIG+G QIRSYV+QPY +VKD RTN+E  + S VLDG++D 
Sbjct: 241 LLKEQEQAEKVSDIRGEIKEIGFGNQIRSYVMQPYTLVKDHRTNVESGNVSSVLDGNIDL 300

Query: 346 FMKATLAIK 354
           FM A L  +
Sbjct: 301 FMNAYLKAQ 309


>gi|146306094|ref|YP_001186559.1| peptide chain release factor 1 [Pseudomonas mendocina ymp]
 gi|166223589|sp|A4XR61|RF1_PSEMY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145574295|gb|ABP83827.1| bacterial peptide chain release factor 1 (bRF-1) [Pseudomonas
           mendocina ymp]
          Length = 360

 Score =  235 bits (600), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 125/346 (36%), Positives = 180/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            DN   R   L     D  +     + +   +E   ++  I+  +E++    D      L
Sbjct: 9   LDNLSDRFEELTALLGDAEVISKQTQFRAYSKEYAEIEPVIATFRELRKVQSDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE---VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E D         +  Q  +      +  Q   L     D  + YLEV AG GG E+  
Sbjct: 69  LKESDPDLREMAEEEVAQAKEALTTLEDKLQRMLLPKDPNDGRNVYLEVRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AEK+ ++ E L  ++GE  G K     ++G N Y  LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAEKQGWRVEVLSANEGEHGGFKEVIARVEGDNVYAKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVNTTDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG VV+CQ+ERSQHKN+A+A   L AKL +   Q+      I E+ K  +G G   
Sbjct: 249 THIPTGTVVECQEERSQHKNRAKAMAWLAAKLQD--QQEAAAHKEISETRKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+   S S+V+ G ++  ++  LA  +
Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYSLSEVMAGGVEAVIEPLLAEYQ 351


>gi|237729831|ref|ZP_04560312.1| peptide chain release factor 2 [Citrobacter sp. 30_2]
 gi|226908437|gb|EEH94355.1| peptide chain release factor 2 [Citrobacter sp. 30_2]
          Length = 310

 Score =  235 bits (600), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 171/308 (55%), Positives = 216/308 (70%), Gaps = 1/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
            +ER  L+  +  + ++   L D   LLELA+E DD     E    L  ++ ++   +F 
Sbjct: 2   GKERSSLEAIVDTLDQMSQGLEDVSGLLELAVEADDEETFNEAVAELDTLEDKLAQLEFR 61

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            + SGE DS D YL++ AG+GGTE+QDWA+ML+RMY RWAE R FKTE +E  +GE AGI
Sbjct: 62  RMFSGEYDSADCYLDIQAGSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAGI 121

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KS T+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ 
Sbjct: 122 KSVTIRIAGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINP 181

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID YRASGAGGQHVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLY
Sbjct: 182 ADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLY 241

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           ELE+QK+       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD 
Sbjct: 242 ELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQ 300

Query: 346 FMKATLAI 353
           F++A+L  
Sbjct: 301 FIEASLKA 308


>gi|93006237|ref|YP_580674.1| peptide chain release factor 1 [Psychrobacter cryohalolentis K5]
 gi|119361584|sp|Q1QAW3|RF1_PSYCK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|92393915|gb|ABE75190.1| bacterial peptide chain release factor 1 (bRF-1) [Psychrobacter
           cryohalolentis K5]
          Length = 362

 Score =  235 bits (600), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 180/347 (51%), Gaps = 10/347 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   +     DP +  +  + + L  E   L +  +  +       D      +
Sbjct: 9   LDQMVDRYEEVTALLSDPSVISDNNKFRELSVEHSDLMDITTLWQNYVGAEKDQADAEAM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E  D  + +   + +   +  +   +       L     D   A+LE+ AG GG E+ 
Sbjct: 69  LKEASDPDMKEMMQEEIDSARDTIVEMEEALNLMMLPKDPNDKVPAFLEIRAGTGGDEAA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY ++A+ + +  E L  ++GE  G K     + G + YG LK E GVHR+ 
Sbjct: 129 IFSGDLFRMYQKFAQNQGWTLEILSANEGEHGGYKEIITRVSGNSVYGRLKFESGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V+    ++++ +D R DT+R+SGAGGQHVNTTDSAVR
Sbjct: 189 RVPDTESQGRVHTSACTVAVMPEVEIDDTVDLNPADIRFDTFRSSGAGGQHVNTTDSAVR 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG VV+CQQERSQHKN+AQA  ML +K+ ++++Q + + A+     +  +G G  
Sbjct: 249 LTHIPTGTVVECQQERSQHKNRAQAMKMLISKIQQVKVQAQVDAADTI--RRDLVGSGDR 306

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R N+       +++GDLD+ + A L   +
Sbjct: 307 SERIRTYNF-PQGRMTDHRINLTLYKLDSIMEGDLDEILDALLREHQ 352


>gi|145639103|ref|ZP_01794711.1| peptide chain release factor 1 [Haemophilus influenzae PittII]
 gi|145272075|gb|EDK11984.1| peptide chain release factor 1 [Haemophilus influenzae PittII]
 gi|309751054|gb|ADO81038.1| Peptide chain release factor 1 [Haemophilus influenzae R2866]
          Length = 361

 Score =  235 bits (600), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 112/344 (32%), Positives = 181/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     D  +  +  + +   +E   L+  +           +      L
Sbjct: 10  LESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQNIEEAEIL 69

Query: 76  ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q   +  +  I+   +  Q   L     D  + YLE+ AG GG E+  +A
Sbjct: 70  LDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 129

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE +++  E L  ++ E+ G K   +L+ G   YG LK E G HR+ R+ 
Sbjct: 130 GDLFRMYSRYAESKRWSMEVLSENESEQGGFKEIIVLVSGEGVYGQLKFESGGHRVQRVP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 190 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 249

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++       +  +  +G G +   
Sbjct: 250 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQ--TDMRRNLLGSGDRSDK 307

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      +V++G +D+ ++  +   +
Sbjct: 308 IRTYNY-PQGRVTDHRINLTIYRLDEVINGKIDELIQPIITEYQ 350


>gi|317473032|ref|ZP_07932332.1| peptide chain release factor 1 protein [Anaerostipes sp. 3_2_56FAA]
 gi|316899461|gb|EFV21475.1| peptide chain release factor 1 protein [Anaerostipes sp. 3_2_56FAA]
          Length = 357

 Score =  235 bits (600), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 124/351 (35%), Positives = 183/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ V+RL  +  +  DP +  +    + LM+E+  L   +   KE      +   
Sbjct: 1   MFDKLESLVERLDTVLQQLNDPDVAGDQNRFRDLMKEQSDLAPIVEKYKEYVQEKQNIEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            LEL  EE D  + +   + L   K  VE  +       +     D  +  +E+ AGAGG
Sbjct: 61  SLELLEEESDEEMKELAKEELSESKANVERLEEELKILLIPKDPNDDKNIIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE R++K E L  ++    G K    +I G  AY   K E GV
Sbjct: 121 DEAALFAADVARMYRSYAEGRRWKVETLSFNESGIGGFKELVFMISGQGAYSRFKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS  ++ + P V+D        +DC+ D +RASG GGQ VNTTD
Sbjct: 181 HRVQRIPATESGGRIHTSTITVAIMPEVEDVEVEV-DLNDCKFDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+VV CQ E+SQ KNK +A  +LR++LYELE QK        E  K+++G
Sbjct: 240 SAVRLTHLPTGIVVSCQDEKSQLKNKDKALKVLRSRLYELEQQK--AHDAEAEKRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       V++GDLD+ + +  A  +
Sbjct: 298 TGDRSEKIRTYNY-PQGRVTDHRIKLTLHKLDSVMNGDLDELIDSLTAADQ 347


>gi|313683376|ref|YP_004061114.1| bacterial peptide chain release factor 2 (brf-2) [Sulfuricurvum
           kujiense DSM 16994]
 gi|313156236|gb|ADR34914.1| bacterial peptide chain release factor 2 (bRF-2) [Sulfuricurvum
           kujiense DSM 16994]
          Length = 369

 Score =  235 bits (600), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 175/351 (49%), Positives = 240/351 (68%), Gaps = 2/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ ++  + G+        RLS +         W +   A ++ +E+  L+  ++   + 
Sbjct: 13  LTTKMQNVTGVVRPQEISARLSEIEALENSDGFWNDAAAAGVIQKEKTQLERRLAKYSKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + L D + L E+A EE D   ++    +   ++  V+  + E LLSGE DS++A + +H
Sbjct: 73  FNTLGDAVDLYEMAKEEGDEETIESLFADAGSLENNVKSMEVEVLLSGEHDSHNAIVTIH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+MLLRMYTRWAE+  F  E L+   GEEAGIK A LLIKG N YG+LK
Sbjct: 133 PGAGGTESQDWASMLLRMYTRWAERHDFTVEMLDYQAGEEAGIKDAALLIKGVNVYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVRISPYDS ++RHTSF+S+ V P +DD I+I+I + D RIDTYRASGAGGQH
Sbjct: 193 NENGIHRLVRISPYDSAAKRHTSFTSVMVSPELDDDIDIDIEDRDIRIDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+RITHIPTG+VVQCQ +RSQHKNKA A+ ML+++LYELE++K++   +  E  
Sbjct: 253 VNKTESAIRITHIPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELEMEKKQAAVDGIE-- 310

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K+E GWG QIRSYVL PYQ VKD R+ I  ++ S++LDGD+D+ ++  L  
Sbjct: 311 KSENGWGHQIRSYVLAPYQQVKDTRSGIPYSNISNILDGDIDEMIEGVLIA 361


>gi|159027417|emb|CAO86901.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 330

 Score =  235 bits (600), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 139/322 (43%), Positives = 212/322 (65%), Gaps = 1/322 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W N   A+  ++E     +++   +   ++L D   ++EL   E D ++L+E +DN+
Sbjct: 5   PTFWDNPDTAQKTLQELNECKSSLETYQSWCEQLEDTKAIIELLELESDRALLEEATDNI 64

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
             ++ +++  + + LL+G  D   A L ++AGAGGT++QDW  MLLRMY+RWAEK+ +K 
Sbjct: 65  THLQHDLDRWELQQLLNGPYDPKGAVLTINAGAGGTDAQDWTEMLLRMYSRWAEKQGYKV 124

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
              EI +G+EAGIKS T+ I G  AYG+LKGE+G HRLVRISP+++N +R TSF+ + V 
Sbjct: 125 TLAEISEGDEAGIKSVTIEIAGTYAYGYLKGEKGTHRLVRISPFNANGKRQTSFAGVEVM 184

Query: 213 PV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           P+  DD + +EI + D  I T R+ G GGQ+VN  ++AVR+ H+PTG+ V+C QERSQ +
Sbjct: 185 PILGDDVVRVEIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAVRCTQERSQLQ 244

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           NK +A  +L+AKL  +  +++ +          E  WG QIR+YV  PYQ+VKDLR+N+E
Sbjct: 245 NKEKALALLKAKLLIIAREQQAQAIAEIRGDMVEAAWGNQIRNYVFHPYQLVKDLRSNVE 304

Query: 332 KTSPSDVLDGDLDDFMKATLAI 353
            T  + V++GDLD F++A L +
Sbjct: 305 TTDVTGVMNGDLDSFIEAYLRL 326


>gi|330961728|gb|EGH61988.1| peptide chain release factor 1 [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 360

 Score =  235 bits (600), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 117/346 (33%), Positives = 175/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  ++  K++     D      L
Sbjct: 9   LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYKQLLKVQADLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +  +  +         Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LKDSDPDMREMAVEEVRETKEQLVDLEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+P+G+VV+CQ+ERSQHKN+A+A + L AKL +   Q       I    K  +G G   
Sbjct: 249 THLPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAANAIASERKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+   S  +VL G +D  ++  LA  +
Sbjct: 307 ERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQ 351


>gi|253571104|ref|ZP_04848511.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides
           sp. 1_1_6]
 gi|251839057|gb|EES67141.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides
           sp. 1_1_6]
          Length = 354

 Score =  235 bits (600), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 131/350 (37%), Positives = 203/350 (58%), Gaps = 11/350 (3%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GG+FD D    ++     +T+ P  W +  +A+  M+  + L   I    E++    +  
Sbjct: 1   GGIFDIDGKKIQVEEEQLRTQAPGFWDDQKKAEAQMKLVKDLQKWIDGYNEVKTLADELE 60

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             L     +++     +      +    VE  + +++L  EAD     L++++GAGGTES
Sbjct: 61  --LSFDFYKEELVTEGDVDAAYAKASEAVEALELKNMLRDEADQMACVLKINSGAGGTES 118

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA+ML+RMY R+AE   +K     + +G+EAGIK+ T+ I+G  AYG+LKGE GVHRL
Sbjct: 119 QDWASMLMRMYLRYAETNGYKATIANLQEGDEAGIKTCTINIEGDFAYGYLKGENGVHRL 178

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR+SPY++  +R TSF+S++V P+VDDSIE+ I  +    DT+R+ GAGGQ+VN  +S V
Sbjct: 179 VRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNILPACISWDTFRSGGAGGQNVNKVESGV 238

Query: 251 RITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           R+ +            ++++  + R Q KN+  A   LR+ LY+ ELQ R       E+ 
Sbjct: 239 RLRYQYKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKVEAG 298

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K +I WG QIRSYV    + VKD RTN + +  + V+DG +++F+KA L 
Sbjct: 299 KKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGKIEEFIKAYLM 347


>gi|329904245|ref|ZP_08273720.1| Peptide chain release factor 1 [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327548069|gb|EGF32798.1| Peptide chain release factor 1 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 360

 Score =  235 bits (600), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 123/344 (35%), Positives = 177/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL  LN       L  ++   + L RE   L   +      +    D     ++
Sbjct: 9   LDQLADRLGELNELLTQEDLASDMDNYRKLTREHAELGPLVELYDSFRVAEADIATAHDM 68

Query: 76  ALEEDDCSILQETS-DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D     QE       R +      Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 69  LADPDMKDFAQEEILAARARTEQIEADLQTMLLPKDPNDERNLFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+ +++ E +     +  G K   + + G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYTRYAERNRWQVEMVSESSSDVGGYKEVIVRVIGNGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P VD+  +++I+ SD RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 TTETQGRIHTSACTVAVMPEVDEISDVDINPSDLRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQHKNKA A  +L A++ +   Q RE+ +    + K+ IG G    +
Sbjct: 249 LPTGIVVECQDDRSQHKNKASALKVLAARIKDA--QVREQQSKEAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++DGDL+D   A  A  +
Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYKLDFIMDGDLNDLTGALAAEHQ 349


>gi|187932243|ref|YP_001892228.1| peptide chain release factor 2 [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|187713152|gb|ACD31449.1| peptide chain release factor 2 [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 325

 Score =  235 bits (600), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 165/324 (50%), Positives = 220/324 (67%), Gaps = 3/324 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L +++  L+N +   + I   L     LLEL  E++        
Sbjct: 2   ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISKTLETLSELLELGKEDESLMQEIAK 61

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
                  ++  E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 62  DTQNVASEI--EKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK    ++ DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPTDLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +KDLRT
Sbjct: 240 QHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIKDLRT 298

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
            +E T+   VLDGDLD F++A+L 
Sbjct: 299 GVENTNTQAVLDGDLDKFIEASLK 322


>gi|254796954|ref|YP_003081791.1| peptide chain release factor 2 [Neorickettsia risticii str.
           Illinois]
 gi|254590201|gb|ACT69563.1| peptide chain release factor 2 [Neorickettsia risticii str.
           Illinois]
          Length = 334

 Score =  235 bits (600), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 167/330 (50%), Positives = 235/330 (71%), Gaps = 1/330 (0%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             +    + P LW++   A++L++E+  ++ ++   +E+  +L D   ++ELA ++ +  
Sbjct: 2   EEIQALVDSPRLWEDQSRAQLLLKEKSQIETSLKEFRELSIQLDDLTEMIELASKDGEEG 61

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
            +++    L  +K +++ K+ E L SGEAD ND  LE+ +GAGGTES DWA MLLRMYTR
Sbjct: 62  AMKDLERELLLLKEKIQKKEIECLFSGEADGNDCLLEIQSGAGGTESNDWAMMLLRMYTR 121

Query: 144 WAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           WAE   KF+ + ++  +GEE GIKS TL + G NAYGW + E GVHRLVRISP+D+N++R
Sbjct: 122 WAEIYHKFQVQIVDKVEGEETGIKSCTLKVMGKNAYGWARTETGVHRLVRISPFDANAKR 181

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSF+ ++V P ++  I I I E D +IDTYRASGAGGQHVN T+SAVRITH+P+ +VVQ
Sbjct: 182 HTSFAKVFVSPCMEGEINISIDEKDLKIDTYRASGAGGQHVNKTESAVRITHLPSKIVVQ 241

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
            Q  RSQH+NKA+A  ML+++LYE+EL+K+EE  N   + +  IGWG QIRSYVL PYQM
Sbjct: 242 SQSSRSQHQNKAEAIQMLKSRLYEIELRKKEEKVNAARNVEDSIGWGYQIRSYVLHPYQM 301

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +KDLRT  E  + + VLDGDLD F+ AT++
Sbjct: 302 IKDLRTGHEVGNITSVLDGDLDSFIIATIS 331


>gi|325299167|ref|YP_004259084.1| Class I peptide chain release factor [Bacteroides salanitronis DSM
           18170]
 gi|324318720|gb|ADY36611.1| Class I peptide chain release factor [Bacteroides salanitronis DSM
           18170]
          Length = 371

 Score =  235 bits (599), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 134/358 (37%), Positives = 207/358 (57%), Gaps = 11/358 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D +N   ++     +T+ P  W +  +A+  M++ + L   I    E+
Sbjct: 10  IKERTEALYRYLDIENKKVQVEEEQLRTQAPGFWDDAKKAEAQMKKVKTLQGWIDGYNEV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +     D+     E  +   + +  VE  + +++L  EAD  D  L+++
Sbjct: 70  KTLADELELAFDFYK--DELVSEAEVDEAYVQAQKAVEELELKNMLRSEADQMDCVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA+ML+RMY RWAE   +K     + +G+EAGIK+ T+ I+G  AYG+LK
Sbjct: 128 SGAGGTESQDWASMLMRMYMRWAESHGYKLSVANLQEGDEAGIKTVTMNIEGAYAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+ +  +    DT+R+ GAGGQ+
Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVTVEPARLSWDTFRSGGAGGQN 247

Query: 243 VNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  +S VR+ +            ++++  + R Q KNK  A   LR+ LY+ ELQ R E
Sbjct: 248 VNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNKENAMRQLRSILYDKELQHRME 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L 
Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYLM 364


>gi|331090678|ref|ZP_08339527.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330400092|gb|EGG79743.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 356

 Score =  235 bits (599), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 110/351 (31%), Positives = 192/351 (54%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCD 68
           +FD  ++ + R   +  + ++P +  +    + LM+E+  L   +    E    +  + D
Sbjct: 1   MFDRLEDLIIRFEEIMGELQEPDVANDQNRFRKLMKEQADLTPIVDAYNEYKSAKQAIAD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           +  +LE+  +E+   + +E     ++  +      +   L     D  +  +E+ AGAGG
Sbjct: 61  SEEMLEMESDEEMRELAKEELSASKKRVEELEHELKILLLPKDPNDDKNIMVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            ES  +A  + RMY  +AE +++KTE +  ++    G K    ++ G + Y  +K E GV
Sbjct: 121 DESALFAAEVYRMYVHYAESKRWKTELISFNENGIGGFKEVVFMVSGQSVYSRMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + +++ I + D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAVMP-EAEEVDVVIDDKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLYELEL+K++  +   E+ +++IG
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYELELEKQQ--SAEAEARRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V + R  +      ++++GDLD+ +   +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTEHRIKLTLYKIDNIMNGDLDEIIDPLIAADQ 347


>gi|320529373|ref|ZP_08030461.1| peptide chain release factor 1 [Selenomonas artemidis F0399]
 gi|320138339|gb|EFW30233.1| peptide chain release factor 1 [Selenomonas artemidis F0399]
          Length = 354

 Score =  235 bits (599), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 109/346 (31%), Positives = 177/346 (51%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---DNLIL 72
                 +   L     DP +  ++   +   RE   L   ++  +  +       ++  +
Sbjct: 5   LTAVADKYRELEALLSDPTVMADMARWQRYTREHAALTPIVTAYEAYRKAEETVAEDKEM 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L  A  E    +L+E +      +   +      L     D  +  +E+  G GG E+  
Sbjct: 65  LAEADAEMKELLLEEIAAAEAERERLAKELPILLLPRDPNDDKNVIVEIRGGVGGEEAAL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY R+AE++ ++TE L  ++ E  G K  + L+ G  AY  LK E G HR+ R
Sbjct: 125 FAASLFRMYARYAERQGWRTEILSSNETEIGGFKEISFLVTGAGAYSKLKYESGTHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           I   +S  R HTS  ++ V P   + +E+ I  +D RIDTY ASGAGGQ+VN T++A+RI
Sbjct: 185 IPVTESGGRIHTSAVTVAVLP-EAEDVEVTIDPNDLRIDTYCASGAGGQYVNRTETAIRI 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VVQCQ E+SQ KNK +A  +LRA++Y+    ++E+   +    ++++G G   
Sbjct: 244 THLPTGIVVQCQDEKSQLKNKEKAMKVLRARIYD--RAQQEQADAVAADRRSQVGSGDRS 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       VLDG+L++ + A +   +
Sbjct: 302 ERIRTYNF-PQGRVTDHRIGLTLYKIDAVLDGELEELLAALITADQ 346


>gi|313792395|gb|EFS40490.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA1]
 gi|313801469|gb|EFS42718.1| peptide chain release factor 2 [Propionibacterium acnes HL110PA2]
 gi|313838232|gb|EFS75946.1| peptide chain release factor 2 [Propionibacterium acnes HL086PA1]
 gi|314963179|gb|EFT07279.1| peptide chain release factor 2 [Propionibacterium acnes HL082PA1]
 gi|315078242|gb|EFT50285.1| peptide chain release factor 2 [Propionibacterium acnes HL053PA2]
 gi|327453496|gb|EGF00151.1| peptide chain release factor 2 [Propionibacterium acnes HL092PA1]
          Length = 371

 Score =  235 bits (599), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 220/353 (62%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D       ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 16  LDASLSSIENVLDPAAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A  +DD   L E +    +++ E++  +  +LLSG+ D  +A + + 
Sbjct: 76  RARIEDVHVLLEFAAADDDKESLAEATTETVKLREEIDALEVRTLLSGQYDEREAVVTIR 135

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RW+E+  +K E L+    EEAGIKSAT ++  P AYG L 
Sbjct: 136 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 195

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 196 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 255

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL E   +++E   N  +S 
Sbjct: 256 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSE 315

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRTN E  +   V DGD+DDF+ A +  ++
Sbjct: 316 GN--SWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 366


>gi|118496781|ref|YP_897831.1| peptide chain release factor 2 [Francisella tularensis subsp.
           novicida U112]
 gi|194324538|ref|ZP_03058310.1| peptide chain release factor 2 [Francisella tularensis subsp.
           novicida FTE]
 gi|118422687|gb|ABK89077.1| peptide chain release factor 2 [Francisella novicida U112]
 gi|194321373|gb|EDX18859.1| peptide chain release factor 2 [Francisella tularensis subsp.
           novicida FTE]
          Length = 325

 Score =  235 bits (599), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 167/324 (51%), Positives = 221/324 (68%), Gaps = 3/324 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L +++  L+N +   + I + L     LLELA E++        
Sbjct: 2   ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELAEEDESLMQEIAK 61

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
                  ++  E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 62  DTQNVASEI--EKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADGH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK     + DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVSVDNVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     VKDLRT
Sbjct: 240 QHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRVKDLRT 298

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
            +E T+   VLDGDLD F++A+L 
Sbjct: 299 GVENTNTQAVLDGDLDKFIEASLK 322


>gi|283479628|emb|CAY75544.1| Peptide chain release factor 1 (RF-1) [Erwinia pyrifoliae DSM
           12163]
          Length = 310

 Score =  235 bits (599), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 170/308 (55%), Positives = 220/308 (71%), Gaps = 1/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
            +ER  L+  +  + ++   L D   LLELA+E +D     E  + L  +  ++   +F 
Sbjct: 2   GKERSALEAVVETLDQMTQGLEDVSGLLELAVEAEDEETFNEAVNELDGLDKKLGELEFR 61

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            + SGE DS D Y+++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  DGE AG 
Sbjct: 62  RMFSGEYDSADCYMDIQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGEVAGT 121

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS+++YP VDD+I+IEI+ 
Sbjct: 122 KSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEINP 181

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID YRASGAGGQHVN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+  LRAKLY
Sbjct: 182 ADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLY 241

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E E+QK+       E +K++IGWG QIRSYVL     +KDLRT++E  +   VLDGDLD 
Sbjct: 242 EYEMQKKNADKQTAEDNKSDIGWGSQIRSYVLDD-SRIKDLRTSVETRNTQAVLDGDLDR 300

Query: 346 FMKATLAI 353
           F++A+L  
Sbjct: 301 FIEASLKA 308


>gi|104780100|ref|YP_606598.1| peptide chain release factor 1 [Pseudomonas entomophila L48]
 gi|166223588|sp|Q1IEX1|RF1_PSEE4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|95109087|emb|CAK13784.1| peptide chain release factor 1 [Pseudomonas entomophila L48]
          Length = 360

 Score =  235 bits (599), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 120/346 (34%), Positives = 175/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  I+     +    D      L
Sbjct: 9   LDTLQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVIACYVGWRKVQDDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE---VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +  +  +         Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LKDADPDLREMAVEEVREAKEQLVGLESQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AEKR ++ E L  ++GE  G K     ++G + YG LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGDSVYGKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+ + IEI+ +D R+DTYRASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQVAIEINPADLRVDTYRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ+ERSQHKN+A+A + L AKL +  +Q       I    K  +G G   
Sbjct: 249 THLPTGIVVECQEERSQHKNRARAMSWLSAKLND--MQTSAAQNAIASERKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+   S  D+L G +D  ++  LA  +
Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYSLDDILAGGVDAVIEPLLAEYQ 351


>gi|49474202|ref|YP_032244.1| peptide chain release factor 2 [Bartonella quintana str. Toulouse]
 gi|49239706|emb|CAF26082.1| Peptide chain release factor 2 (rf-2 [Bartonella quintana str.
           Toulouse]
          Length = 322

 Score =  235 bits (599), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 211/309 (68%), Positives = 253/309 (81%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD++IS I+     L + + L+ +  EE D  I+ +  + ++ +K E++ +Q +
Sbjct: 2   MRERQRLDDSISGIQSFTKTLEECIELIAMGEEESDVEIITDAENLIRNLKNEIDKRQID 61

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLS EAD ND YLEVHAGAGGTESQDWA+MLLRMY RWAE+ K K E LEIHDGEEAGI
Sbjct: 62  MLLSREADPNDTYLEVHAGAGGTESQDWASMLLRMYMRWAEQHKMKVEILEIHDGEEAGI 121

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ +KG NAYG LK E GVHRLVRISPYDSN++RHTSF+SIWVYPV+DD+IE+++SE
Sbjct: 122 KSATIFVKGHNAYGLLKTESGVHRLVRISPYDSNAKRHTSFASIWVYPVIDDNIEVDVSE 181

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD RIDTYR+SGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+LY
Sbjct: 182 SDVRIDTYRSSGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLY 241

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE  N  ESSKTEIGWG QIRSYVLQPYQ+VKDLRT +E T P  VL+G+LD 
Sbjct: 242 EQELKKREEKTNAVESSKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTDPQSVLNGNLDA 301

Query: 346 FMKATLAIK 354
           F++A LA +
Sbjct: 302 FIEAALAQR 310


>gi|254447802|ref|ZP_05061267.1| peptide chain release factor 1 [gamma proteobacterium HTCC5015]
 gi|198262582|gb|EDY86862.1| peptide chain release factor 1 [gamma proteobacterium HTCC5015]
          Length = 358

 Score =  235 bits (599), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 183/344 (53%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N V R   +     DP +  +    + L +E   L+       E Q +  +     E+
Sbjct: 9   LENLVARHEEVGMLLSDPDVINDQNRFRDLSKEYAELEPVTKTFSEYQTQSDNLSTAEEM 68

Query: 76  ALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + QE  D     I+   +  Q   L S   D+++ Y+E+ AG GG E+  +A
Sbjct: 69  LDDPDMKEMAQEEIDSARVEIERLEQELQILLLPSDPHDNSNIYVEIRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE + ++ E     +GE  G K     I G  A+  +K E G HR+ R+ 
Sbjct: 129 GDLLRMYTRYAENQGWRVELQAESEGEHGGYKEVIARIIGQGAFSKMKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ + P +D+    +I+ +D RIDT+RASGAGGQHVN TDSA+RITH
Sbjct: 189 ETESQGRIHTSAATVAIMPEIDEVEAPDINPADLRIDTFRASGAGGQHVNKTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+ Q ERSQHKN+A+A + L++K+ + E  K+ +      + K+ +G G    +
Sbjct: 249 VPTGIVVESQAERSQHKNRARAMSQLQSKIIQGERDKQAQEQ--AATRKSLVGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      DV+ G L+  +   ++  +
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKLDDVMGGGLEQVIDPLVSEYQ 349


>gi|331082607|ref|ZP_08331730.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330400226|gb|EGG79868.1| peptide chain release factor 1 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 358

 Score =  235 bits (599), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 115/351 (32%), Positives = 189/351 (53%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + RL  +  +  +P +  +    + LM+E+  L        E ++       
Sbjct: 1   MFDKLEDILVRLEEILNELNEPTVANDTARFQKLMKEQSELQPIADAYTEYKNCKETVED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   + L   K  +E  +       L     D  +  +E+ AGAGG
Sbjct: 61  SLMMLDEESDEEMREMLKEELSDAKKRIEELEQELKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY ++AE + ++TE L +++    G K  T +I G  AY  LK E GV
Sbjct: 121 DEAALFAAEIYRMYVKYAESQNWRTEMLSLNENGIGGFKEVTFMINGQGAYSKLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ + P   + I+ E+  +DC+ D +RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAIMP-EAEEIDFELDLNDCKFDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+ CQ E+SQ KNK +A  +LR++LY++ELQKR +     E+ ++++G
Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYDMELQKRHD--AEAEARRSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++GD+ + +   +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSIMNGDIQEVIDNLIAADQ 347


>gi|226315063|ref|YP_002774959.1| peptide chain release factor 1 [Brevibacillus brevis NBRC 100599]
 gi|254790866|sp|C0Z828|RF1_BREBN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226098013|dbj|BAH46455.1| peptide chain release factor 1 [Brevibacillus brevis NBRC 100599]
          Length = 358

 Score =  235 bits (599), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 187/347 (53%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
                +R   +     DP +  +    + L +E+  L+  ++  +E +    ++ D   +
Sbjct: 5   LSAVEERFEEVTNLLCDPDVISDTKRLRELSKEQSSLEETVTTYREYKSVVSQIDDAKAM 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LE  L+++   +++   + L   K ++E + +   L     D  +  +E+   AGG E+ 
Sbjct: 65  LEEKLDDEMREMVKLELNELSARKEQLEDRLKILLLPKDPNDEKNVIVEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A +L RMYTR+AE+  FK E LE    +  G K     + G  AY  +K E G HR+ 
Sbjct: 125 LFAAVLFRMYTRFAERNAFKIEVLEASPTDIGGYKEIVFSLSGRGAYSKMKFESGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + +E+E+ E D RIDT+ +SGAGGQ VNTT SAVR
Sbjct: 185 RIPATESGGRIHTSTATVLVLP-EAEDVEVEVHEKDIRIDTFCSSGAGGQSVNTTKSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG++V CQ E+SQH NK +A  +LRA+LY+  +Q++   A+   + K+ +G G  
Sbjct: 244 VTHIPTGIMVSCQDEKSQHSNKDKALRVLRARLYDFYMQQQNAEAD--ATRKSLVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       VL+G++D+ +   +  ++
Sbjct: 302 SERIRTYNY-PQSRVTDHRIGLTLHRLESVLEGEMDEVIDNLIMHEQ 347


>gi|241667458|ref|ZP_04755036.1| peptide chain release factor 2 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876005|ref|ZP_05248715.1| peptide chain release factor [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842026|gb|EET20440.1| peptide chain release factor [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 325

 Score =  235 bits (599), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 169/324 (52%), Positives = 228/324 (70%), Gaps = 3/324 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L R++  L+N +   + I + L    +   L L E+D S++QE 
Sbjct: 2   ELEDGSIWDNPEYAQNLGRQKVELENVVHNCEYISETLE--TLTELLELAEEDESLMQEI 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           + + Q +  E+E  +F  + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 60  AKDTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK    ++ DG+ AGIK  TL ++G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKVEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +KDLRT
Sbjct: 240 QHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIKDLRT 298

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
            +E T+   VLDGDLD F++A+L 
Sbjct: 299 GVENTNTQAVLDGDLDKFIEASLK 322


>gi|220932633|ref|YP_002509541.1| peptide chain release factor 1 [Halothermothrix orenii H 168]
 gi|219993943|gb|ACL70546.1| peptide chain release factor 1 [Halothermothrix orenii H 168]
          Length = 358

 Score =  235 bits (599), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 124/353 (35%), Positives = 190/353 (53%), Gaps = 15/353 (4%)

Query: 13  LFDW----DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           +FD     D  V R + LN +  DP +  N  + + L++E   L   +S  +E +  L  
Sbjct: 1   MFDLTKKLDKLVDRYNELNKEISDPDVINNSEQYQKLLKEHGKLKEIVSKYREYKKVLSR 60

Query: 69  NLILLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
                 +  EE++  + +           R +   +   +  L     D  +  +E+ AG
Sbjct: 61  VEEAHSIIEEEEEQEVRELAEMELKELTPRKEKMEDELTYMLLPEDPNDEKNVIVEIRAG 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L RMY+R+AE + +KTE +  +     G K     ++G N Y  LK E
Sbjct: 121 AGGDEAGLFAADLYRMYSRYAESKNWKTEVISANASGIGGYKEIIFTVEGKNVYSRLKYE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS +++ V P   + ++++I  +D RID YR+SG GGQ VN
Sbjct: 181 SGVHRVQRVPTTESGGRIHTSTATVAVLP-EAEEVDVDIDPNDLRIDVYRSSGPGGQSVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRITH PTG+VV CQ E+SQHKNKA+A  +LRA+L EL  ++++   +  E+ K+
Sbjct: 240 TTDSAVRITHEPTGLVVSCQDEKSQHKNKARAMRILRARLKELMEKEKQAEID--EARKS 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IG G    +IR+Y   P   V D R N+     +D+LDG+LD  +   +   
Sbjct: 298 QIGSGDRSEKIRTYNF-PQGRVSDHRINLTIHQLNDILDGNLDLIIDNLIKED 349


>gi|170717669|ref|YP_001784745.1| peptide chain release factor 1 [Haemophilus somnus 2336]
 gi|189039976|sp|B0UUE6|RF1_HAES2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|168825798|gb|ACA31169.1| peptide chain release factor 1 [Haemophilus somnus 2336]
          Length = 360

 Score =  235 bits (599), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 184/344 (53%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     +  +  +  + +   +E   L++ +           +      L
Sbjct: 9   LESLKERHEELEALLGESSVINDQDKFRAYSKEYAQLEDVVKCFARWNWLNNNIEETQLL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +   +  +      E + Q   L     D  +AYLE+ AG GG E+  +A
Sbjct: 69  LDDPDMKEMAELEIEESKAEIENAEQQLQILLLPKDPNDEYNAYLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESKRWRVEVLNANESEQGGYKEIIVKVNGEGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   EI+ SD RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPENEMPEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A ++L +++ + E +++ +     ++ +  +G G +   
Sbjct: 249 IPTGIVVECQDERSQHKNKAKALSVLASRIAQAEQERQAQAQ--ADTRRNLLGSGDRSDK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      +V++G +D+ ++  +   +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTVYRLDEVMNGKIDELIQPIITEYQ 349


>gi|254787712|ref|YP_003075141.1| peptide chain release factor 1 [Teredinibacter turnerae T7901]
 gi|259585256|sp|C5BSZ6|RF1_TERTT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|237684441|gb|ACR11705.1| peptide chain release factor 1 [Teredinibacter turnerae T7901]
          Length = 360

 Score =  235 bits (599), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 110/346 (31%), Positives = 181/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N V+R   +     DP +  +  + + L +E   L+  +   +E +  + +      L
Sbjct: 9   LENLVERYDEVGALLGDPDIIADQKKFRDLGKEYSELEPVVICYQEYRTVIENIAEAKML 68

Query: 76  ALEEDDCSILQETSDNLQ---RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +      +++      Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  MNDGDADMREMAQEELKTAEAQLEPLETQLQKLLLPKDPNDEKNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AE+  ++ E +  + GE  G K     + G   Y  LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAERAGWRIEIISENAGEHGGYKELITRVVGQGVYSQLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ + P  D+S E+E+++ D RIDT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVAIMPEADESEEVELNKGDLRIDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV+CQ ERSQHKN+A+A ++L A++   + ++    A      K+ +G G   
Sbjct: 249 THIPTGIVVECQDERSQHKNRAKAMSLLAARINSAQAEQ--FAAEQASERKSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+      ++++G LD+ ++  +   +
Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLDEIMEGSLDEVIQPLVNEHQ 351


>gi|119472532|ref|ZP_01614580.1| Peptide chain release factor 1 (RF-1) [Alteromonadales bacterium
           TW-7]
 gi|119444856|gb|EAW26156.1| Peptide chain release factor 1 (RF-1) [Alteromonadales bacterium
           TW-7]
          Length = 361

 Score =  235 bits (599), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 119/346 (34%), Positives = 183/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72
            +  V+R   +     DP +  +    + L +E   L+  +      Q    D      +
Sbjct: 9   LETLVERYEEVQALLSDPSVISDQNRFRGLSKEYSELEEIVKTFLAYQQTKEDLASAEEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L+ +  +      +E  +   +I    +  Q   L     D+N+ +LEV AG GG E+  
Sbjct: 69  LKDSDPDMREMAQEEYKEAKAQILSLEDEIQVLMLPKDPKDNNNVFLEVRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE +K+K E +  ++GE  G K     I G   YG LK E GVHR+ R
Sbjct: 129 FAGDLFRMYSRFAETQKWKLEVVTTNEGEHGGYKEVIANISGEGVYGKLKFESGVHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   + ++  IEI+ +D ++DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRVHTSACTVAVMAEIPEAEAIEINTADIKVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTGVVV+CQ ERSQHKN+A+A ++L A+L + E +KR   A      +  +G G   
Sbjct: 249 THLPTGVVVECQDERSQHKNRAKAMSVLAARLQQAEDEKR--HAAEASERRNLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N+     ++V+ GDL   +   +   +
Sbjct: 307 ERIRTYNY-PQGRITDHRINLTLYRLNEVVAGDLGAIVDPLMQEHQ 351


>gi|161621297|ref|YP_585342.2| peptide chain release factor 1 [Cupriavidus metallidurans CH34]
 gi|119361586|sp|Q1LIF3|RF1_RALME RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 360

 Score =  235 bits (599), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 176/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  +N          N+ + + L RE   L        + +    D      L
Sbjct: 9   LDQLAERLDEVNALLAREDATANMDQYRKLSREHAELSPVAEQYGQYRQAQDDLATAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +      +  D  +   +      Q   L     D  +  LE+ AG GG ES  +A
Sbjct: 69  LDDPEMKEFAADEIDAARERLQSLENSLQTLLLPKDPNDDRNLLLEIRAGTGGEESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+R+++ E +     +  G K   + I G  A+  LK E G HR+ R+ 
Sbjct: 129 ADLLRMYTRYAERRRWQVEIMSESPSDLGGYKEVIVRIAGDAAFSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  E+EI+ SD R+DT+RASGAGGQHVN TDSAVR+TH
Sbjct: 189 ATESQGRIHTSACTVAVMPEADEVGEVEINPSDLRVDTFRASGAGGQHVNKTDSAVRLTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A++ +++L  R   A    + +  IG G    +
Sbjct: 249 LPTGIVVECQDDRSQHRNKEKAMKVLAARIKDMQL--RAAQAKEANTRRNLIGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       ++DGDLD+ + A  A  +
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKIDMIMDGDLDELISALSAEHQ 349


>gi|157738274|ref|YP_001490958.1| peptide chain release factor 2 [Arcobacter butzleri RM4018]
 gi|315636563|ref|ZP_07891799.1| peptide chain release factor RF2 [Arcobacter butzleri JV22]
 gi|166977372|sp|A8EWG5|RF2_ARCB4 RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|157700128|gb|ABV68288.1| peptide chain release factor 2 [Arcobacter butzleri RM4018]
 gi|315479212|gb|EFU69909.1| peptide chain release factor RF2 [Arcobacter butzleri JV22]
          Length = 365

 Score =  235 bits (599), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 162/344 (47%), Positives = 224/344 (65%), Gaps = 2/344 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           + G+   D   +RL  +  +      W +V  A  +  E+  +   ++   +  D L   
Sbjct: 20  IKGILKPDILNKRLEEIKNEEASQDFWNDVENATKIGIEKNRILGKLNKFNKAFDSLTGT 79

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L E+A  E D   L+   +    ++  ++  +   +LS   DS++A + +H GAGGTE
Sbjct: 80  NELYEMATAEKDDETLEMLYEEASDLENLIKSTEISVMLSNPDDSSNAIVSIHPGAGGTE 139

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           SQDWA++L RMY RWAE+  FK E L+   G+EAGIK  + +IKG NAYG++K E G+HR
Sbjct: 140 SQDWASILYRMYLRWAERNDFKVELLDYQAGDEAGIKDVSFIIKGENAYGYMKAENGIHR 199

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+DSN++RHTSFSS+ V P +DD+I I I + D RIDTYRASGAGGQHVN T+SA
Sbjct: 200 LVRISPFDSNAKRHTSFSSVMVSPEIDDNINIVIEDKDIRIDTYRASGAGGQHVNKTESA 259

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +RITHIPTG+VVQCQ +RSQHKNK  A+ ML+++LYE EL+K+    +  E  K++ GWG
Sbjct: 260 IRITHIPTGIVVQCQNDRSQHKNKDSAFKMLKSRLYEYELEKQRASKDGIE--KSDNGWG 317

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIRSYVLQPYQ VKD R+NI  ++   +LDGD+   ++  L  
Sbjct: 318 HQIRSYVLQPYQQVKDSRSNIGYSNVDAILDGDITKMIEDVLIA 361


>gi|308233692|ref|ZP_07664429.1| peptide chain release factor 2 [Atopobium vaginae DSM 15829]
 gi|328943371|ref|ZP_08240836.1| peptide chain release factor RF2 [Atopobium vaginae DSM 15829]
 gi|327491340|gb|EGF23114.1| peptide chain release factor RF2 [Atopobium vaginae DSM 15829]
          Length = 375

 Score =  235 bits (599), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 140/354 (39%), Positives = 195/354 (55%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L ++   +G     +     +  L  +  +   W +   A  +M +   L   ++    
Sbjct: 16  ELEQRCEQVGMYLHINELRSHVDKLTVQAGETTFWNDAAHATEVMAQLGALKEKLNQYDS 75

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLE 120
               L D     ELA        +   +  L      V    +  +  + E D+  A + 
Sbjct: 76  AYKLLLDVQAAFELADTSSQDDEMLIEAKRLANKLTNVLDNLELNTWFNDEFDTGAAIVT 135

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +  G GG E+QDW +ML +MY  + E++ +  +  +   GE  GI  AT  + G NAYG 
Sbjct: 136 ITPGQGGLEAQDWCDMLFKMYLHYCERKSWTVDINDAPVGEVIGIDRATFTVTGKNAYGM 195

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ EQGVHRLVRISP D+  RR T+F+ + V PV+  +IE++I   D RID Y ASG GG
Sbjct: 196 LRAEQGVHRLVRISPTDAKKRRQTTFAGVEVLPVLPQTIEVQIDTQDIRIDVYHASGPGG 255

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVRITHIPTG+VV CQ ERSQ +NKA A  +LR+KLYELE Q+REE  +   
Sbjct: 256 QGVNTTDSAVRITHIPTGIVVTCQNERSQLQNKAAAMQILRSKLYELEKQRREEELDDLR 315

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAI 353
             K +I WG QIR+Y+L P+Q+VKD RT +E  +   VL +GDLD F+ A    
Sbjct: 316 GPKHDISWGNQIRNYILYPFQLVKDTRTQVETGNVDAVLQEGDLDQFIIAYHRW 369


>gi|209885116|ref|YP_002288973.1| peptide chain release factor 2 [Oligotropha carboxidovorans OM5]
 gi|209873312|gb|ACI93108.1| peptide chain release factor 2 [Oligotropha carboxidovorans OM5]
          Length = 322

 Score =  235 bits (599), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 203/309 (65%), Positives = 246/309 (79%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L+N +  I   +  L D + L+EL   E+D +++ E    L  +K +V  ++ E
Sbjct: 1   MQERTSLENQLGGIGRTERELEDQIGLIELGEAENDAAVVAEAEAALAALKKDVARQELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWA+MLLRMYTRWAE++ FK E LE   GEEAGI
Sbjct: 61  ALLSGEADRFDTYLEVHAGAGGTESQDWASMLLRMYTRWAERKGFKVEFLEETQGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISPYDSN+RRHTSFSSI ++PVVD+SI+I+I+E
Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPYDSNARRHTSFSSIAIFPVVDNSIKIDINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ +  S VLDGDLD+
Sbjct: 241 EIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300

Query: 346 FMKATLAIK 354
           FM ATLA K
Sbjct: 301 FMAATLAQK 309


>gi|257125766|ref|YP_003163880.1| peptide chain release factor 2 [Leptotrichia buccalis C-1013-b]
 gi|257049705|gb|ACV38889.1| bacterial peptide chain release factor 2 (bRF- 2) [Leptotrichia
           buccalis C-1013-b]
          Length = 364

 Score =  235 bits (599), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 161/345 (46%), Positives = 221/345 (64%), Gaps = 2/345 (0%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
               D +N    +  L  +T +P  W N   ++ +++        +     +     D  
Sbjct: 21  RRHLDLENLKIEIENLEKQTFEPDFW-NAENSQEILKNISAKKKMLEEYDNLNGLFEDVS 79

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            ++E     D+    +      ++++ E++  + + LL  E D+N+A L +++GAGGTE+
Sbjct: 80  TIIEFIEMGDNSFENE-LEQKAKKLENEIDNFKTKLLLDEEYDTNNAILTINSGAGGTEA 138

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA ML RMY RWA +  FK E L+   GEEAGIKS TL IKG  AYG+LKGE+GVHRL
Sbjct: 139 CDWAEMLYRMYDRWANRHNFKVEVLDSLAGEEAGIKSITLNIKGSYAYGYLKGEKGVHRL 198

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+DSN+RRHTSF+++ V P ++D +EI I   D +IDTYRASGAGGQHVNTTDSAV
Sbjct: 199 VRISPFDSNARRHTSFAAVNVTPEIEDDVEINIRTEDLKIDTYRASGAGGQHVNTTDSAV 258

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIPT  VV CQ ERSQ KN+  A  +L++KL+ELEL+KRE+     + ++++I WG 
Sbjct: 259 RITHIPTNTVVTCQNERSQLKNRETAMKILKSKLFELELEKREKEMAELKGTESKIEWGS 318

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           QIRSYV QPY+MVKD RT  E+ +   V+DGD+D F+   L   K
Sbjct: 319 QIRSYVFQPYKMVKDHRTKAEEGNVEKVMDGDIDLFINEYLKYSK 363


>gi|227355360|ref|ZP_03839761.1| peptide chain release factor 1 [Proteus mirabilis ATCC 29906]
 gi|227164584|gb|EEI49455.1| peptide chain release factor 1 [Proteus mirabilis ATCC 29906]
          Length = 360

 Score =  235 bits (599), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 118/337 (35%), Positives = 179/337 (53%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     +  +  +    + L +E   L +  S  ++ +    D      +
Sbjct: 9   LEALQERYEEIQALLAEADVIASQERFRALSKEYAQLTDVTSCYRQWRKVQDDMEAAEMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE         +   +  Q   L     D  + +LE+ AG GG E+  +A
Sbjct: 69  LDDPEMKEMAQEELKEAQSVNEELEQQLQVLLLPKDPDDEFNCFLEIRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +  ++GE  G K     + G  AYG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRIEVMNANEGEHGGYKEIIAKVIGDGAYGVLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P V ++   EIS SD RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVLPEVPEAELPEISPSDLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR+E        +  +G G    +
Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVQKRQE--AEASERRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           IR+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDALIQ 342


>gi|319405668|emb|CBI79291.1| peptide chain release factor RF-2 [Bartonella sp. AR 15-3]
          Length = 332

 Score =  235 bits (599), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 216/320 (67%), Positives = 266/320 (83%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR 94
           LW +  +A+ +MRERQ+L+++++  +    RL + + L+ +  EE+D  I+ ET + +++
Sbjct: 2   LWNDAQKAQDMMRERQNLEDSMNSTQLFAQRLEECIELIAMGEEENDVGIIAETENTIRQ 61

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +K E++ +Q E LLSGEADSND YLE+HAGAGGTESQDWA+MLLRMYTRWAE+ K K E 
Sbjct: 62  LKSEIDKRQIEMLLSGEADSNDTYLEIHAGAGGTESQDWASMLLRMYTRWAEQHKMKVEV 121

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           LE HDGEEAGIKSAT+L+KG NAYG LK E GVHRLVRISPYDSNS+RHTSF+SIWVYPV
Sbjct: 122 LETHDGEEAGIKSATILVKGHNAYGLLKTESGVHRLVRISPYDSNSKRHTSFASIWVYPV 181

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           VD++IE+++SE+D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A
Sbjct: 182 VDENIEVDLSEADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRA 241

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            AW+MLRA+LYE EL+KREE  N  E+SKTEIGWG QIRSYVLQPYQ+VKD RT +E T 
Sbjct: 242 TAWSMLRARLYEEELKKREEETNAVEASKTEIGWGHQIRSYVLQPYQLVKDSRTGLENTD 301

Query: 335 PSDVLDGDLDDFMKATLAIK 354
           P  VL+GDLD F++A LA +
Sbjct: 302 PQTVLNGDLDAFIEAALAQR 321


>gi|260589191|ref|ZP_05855104.1| peptide chain release factor 1 [Blautia hansenii DSM 20583]
 gi|260540272|gb|EEX20841.1| peptide chain release factor 1 [Blautia hansenii DSM 20583]
          Length = 358

 Score =  235 bits (599), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 115/351 (32%), Positives = 189/351 (53%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + RL  +  +  +P +  +    + LM+E+  L        E ++       
Sbjct: 1   MFDKLEDILVRLEEILNELNEPTVANDTARFQKLMKEQSELQPIADAYTEYKNCKETVED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   + L   K  +E  +       L     D  +  +E+ AGAGG
Sbjct: 61  SLMMLDEESDEEMREMLKEELSDAKKRIEELEQELKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY ++AE + ++TE L +++    G K  T +I G  AY  LK E GV
Sbjct: 121 DEAALFAAEIYRMYVKYAESQNWRTEMLSLNENGIGGFKEVTFMINGQGAYSKLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ + P   + I+ E+  +DC+ D +RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTITVAIMP-EAEEIDFELDLNDCKFDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+ CQ E+SQ KNK +A  +LR++LY++ELQKR +     E+ ++++G
Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRSRLYDMELQKRHD--AEAEARRSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++GD+ + +   +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDSIMNGDIQEIIDNLIAADQ 347


>gi|56476056|ref|YP_157645.1| peptide chain release factor 1 [Aromatoleum aromaticum EbN1]
 gi|81598974|sp|Q5P7G7|RF1_AZOSE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56312099|emb|CAI06744.1| peptide chain release factor 1 (RF-1) [Aromatoleum aromaticum EbN1]
          Length = 359

 Score =  235 bits (599), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 118/345 (34%), Positives = 186/345 (53%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    RL+ L+ +       +++   + L RER  ++  ++     +    D      +
Sbjct: 9   LELLTHRLAELDRELSSGDAVRDMDGFRSLGRERAEIEPVVALYGAYRQAEADCESARAM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGAGGTESQDW 133
             + +    L E+      ++L+    + +   L    +D  + +LEV AG GG E+  +
Sbjct: 69  LADAE-MRELAESELETGAVRLQALEAELQCALLPCDPSDERNLFLEVRAGTGGDEASLF 127

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  LLRMYTR+AE++++K E +     +  G K   L I G  AY  LK E G HR+ RI
Sbjct: 128 AGDLLRMYTRYAERQRWKVEIVSSSPSDLGGYKEVILRIAGAGAYSKLKFESGGHRVQRI 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS  ++ V P  D+   + I+ +D RIDT+RASGAGGQH+N TDSAVRIT
Sbjct: 188 PVTETQGRIHTSACTVAVMPEADEVEAVNINPADLRIDTFRASGAGGQHINKTDSAVRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG+VV+CQ +RSQH+N+AQA ++L A++ + +L  RE+ A    + K+ +G G    
Sbjct: 248 HLPTGIVVECQDDRSQHRNRAQAMSVLAARIQDRQL--REQQAREAATRKSLVGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R N+       V+ GDLD+ + A     +
Sbjct: 306 RIRTYNY-PQGRVTDHRINLTLYKLDAVMQGDLDELVDALTREHQ 349


>gi|114704660|ref|ZP_01437568.1| peptide chain release factor 2 protein [Fulvimarina pelagi
           HTCC2506]
 gi|114539445|gb|EAU42565.1| peptide chain release factor 2 protein [Fulvimarina pelagi
           HTCC2506]
          Length = 321

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 213/309 (68%), Positives = 253/309 (81%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQHL+  I+ I+E++  + +N+ L+ +  EE D  I+ E    L+ ++ +   +Q E
Sbjct: 1   MRERQHLETNITAIRELESAVEENVELIAMGEEEGDGEIVSEAEATLKTLQTDAAKRQIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEADSND Y+EVH+GAGGTESQDWA+ML RMY RWAE+  FK E LE   GEEAGI
Sbjct: 61  TLLSGEADSNDTYMEVHSGAGGTESQDWASMLQRMYIRWAERANFKVEVLEEQGGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KS TLLIKG NAYGW K E GVHRLVRISPYDS +RRHTSF+S+WVYPVVDD+I+IE++E
Sbjct: 121 KSTTLLIKGHNAYGWAKTESGVHRLVRISPYDSQARRHTSFASVWVYPVVDDTIDIEVNE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD RIDTYRASGAGGQHVNTTDSAVRITHI TG+VV CQQERSQHKN+A AWNML+A+LY
Sbjct: 181 SDVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVACQQERSQHKNRATAWNMLKARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KRE  AN   +SKT+IGWG QIRSYVLQPYQ+VKDLRT IE TSP DVLDG+LD+
Sbjct: 241 EAELEKREAEANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGIESTSPQDVLDGELDE 300

Query: 346 FMKATLAIK 354
           FM+A LA +
Sbjct: 301 FMEAALAHR 309


>gi|315634081|ref|ZP_07889370.1| peptide chain release factor RF1 [Aggregatibacter segnis ATCC
           33393]
 gi|315477331|gb|EFU68074.1| peptide chain release factor RF1 [Aggregatibacter segnis ATCC
           33393]
          Length = 360

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 183/344 (53%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+  +R   L     D  +  +  + +   +E   L++ +           +      L
Sbjct: 9   LDSLKERYEELEALLGDASVISDQDKFRAYSKEYSQLEDVVKSFSRWNQLNANLEEAQLL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q   +  +    +VE   Q   L     D  + YLE+ AG GG E+  +A
Sbjct: 69  LDDPEMKEMAQMEIEESKAELEQVEQHLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE ++++ E L  ++ E+ G K    L+ G  AYG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAETKRWRIEVLSENESEQGGFKEIIALVSGDGAYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ SD RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPSDLRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+VV+CQ ERSQHKNKA+A ++L ++L  ++ ++ +      ++ +  +G G +   
Sbjct: 249 IPTGMVVECQDERSQHKNKAKALSVLASRL--VQQEQEKLEQEQADTRRNLLGSGDRSDK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      +V++G +DD ++  +   +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTIYRLDEVMNGKIDDLIQPIITEYQ 349


>gi|197284958|ref|YP_002150830.1| peptide chain release factor 1 [Proteus mirabilis HI4320]
 gi|238693176|sp|B4EVR7|RF1_PROMH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|194682445|emb|CAR42344.1| peptide chain release factor 1 [Proteus mirabilis HI4320]
          Length = 360

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 118/337 (35%), Positives = 179/337 (53%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     +  +  +    + L +E   L +  S  ++ +    D      +
Sbjct: 9   LEALQERYEEIQALLAEADVIASQERFRALSKEYAQLTDITSCYRQWRKVQDDMEAAEMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE         +   +  Q   L     D  + +LE+ AG GG E+  +A
Sbjct: 69  LDDPEMKEMAQEELKEAQSVNEELEQQLQVLLLPKDPDDEFNCFLEIRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +  ++GE  G K     + G  AYG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRIEVMNANEGEHGGYKEIIAKVIGDGAYGVLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P V ++   EIS SD RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVLPEVPEAELPEISPSDLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR+E        +  +G G    +
Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVQKRQE--AEASERRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           IR+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDALIQ 342


>gi|150015324|ref|YP_001307578.1| peptide chain release factor 2 [Clostridium beijerinckii NCIMB
           8052]
 gi|149901789|gb|ABR32622.1| peptide chain release factor 2 [Clostridium beijerinckii NCIMB
           8052]
          Length = 324

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 147/325 (45%), Positives = 213/325 (65%), Gaps = 1/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ++   W N+ +A+ + ++ + + + I    +++ ++ D  +L E+  ++D+ S  +   
Sbjct: 1   MQESGFWDNIKKAEEVTKKSKSIKDKIESFDKLKSQIEDIEVLKEIMEDDDEESANEIIQ 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
                I+ +++    + LL GE D N+A L +H G GGT++ DW  MLLRMYTRW EK+ 
Sbjct: 61  TLRD-IQAQIDDYNMKVLLCGEYDKNNAILTLHVGVGGTDANDWTEMLLRMYTRWCEKQG 119

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  E L++  G+EAGIKS TL + G  AYG+LK E+G+HRLVRISPY++N +R TSF+S+
Sbjct: 120 YSIETLDLLPGDEAGIKSVTLKVTGEYAYGYLKAEKGIHRLVRISPYNANGKRQTSFASM 179

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +    +IEI   D +IDTYR+ GAGGQHVN TDSAVRITHIPTGVVVQCQ ERSQ
Sbjct: 180 EVLPELTKEQDIEIRSDDLKIDTYRSGGAGGQHVNKTDSAVRITHIPTGVVVQCQNERSQ 239

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
             N+  A  ML++KL EL+ +  +E          ++GWG QIRSYV  PY MVKD RTN
Sbjct: 240 FSNRDTAMEMLKSKLVELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRTN 299

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +E ++ + V+DG++D F+ A L  +
Sbjct: 300 VETSNVTSVMDGEIDMFINAYLKQQ 324


>gi|150015294|ref|YP_001307548.1| peptide chain release factor 1 [Clostridium beijerinckii NCIMB
           8052]
 gi|189039964|sp|A6LQG2|RF1_CLOB8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|149901759|gb|ABR32592.1| peptide chain release factor 1 [Clostridium beijerinckii NCIMB
           8052]
          Length = 360

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 120/347 (34%), Positives = 187/347 (53%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    +   L+ K  DP + QN  E + L +E   L+  ++  +E +  + D     E+
Sbjct: 6   LEFIENKYDELSVKISDPSIMQNQNEWRKLCKEHADLEVIVNSYREYKKVVEDLKANKEM 65

Query: 76  ALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +  ++       R +      Q   L     D  + ++E+  GAGG E+ 
Sbjct: 66  LSGESDKEMREMLNEEITDLTNREEQLETEIQILLLPKDPNDDKNVFVEIRGGAGGEEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE +++  E + +++ +  G K    +IKG  AY  LK E GVHR+ 
Sbjct: 126 LFAYNLFRMYTRYAETQRWGVEIMSLNETDLGGFKEVVFMIKGNGAYSKLKYESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P   D +EIE+++ D RID +RASG GGQ VNTTDSAVR
Sbjct: 186 RVPDTESSGRIHTSTATVAVLP-EVDDVEIEVADKDVRIDVFRASGNGGQCVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ E+SQ KNK +A  +L+++LY  E  +RE    I E  K+++G G  
Sbjct: 245 ITHLPTGLVVSCQDEKSQLKNKEKAMKVLKSRLY--EQAERERAQGIAEDRKSQVGTGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R  +        L GD+D+ + A +   +
Sbjct: 303 SERIRTYNY-PQGRITDHRIGLTLYKLDTFLGGDIDEMINALITADQ 348


>gi|34495535|ref|NP_899750.1| peptide chain release factor 1 [Chromobacterium violaceum ATCC
           12472]
 gi|46576724|sp|Q7P1Y2|RF1_CHRVO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|34101390|gb|AAQ57759.1| peptide chain release factor I [Chromobacterium violaceum ATCC
           12472]
          Length = 358

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 172/344 (50%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +          Q++   K L RE   L   +      +    D     ++
Sbjct: 9   LAQLADRLEEVTHLLASETATQDMEAFKKLTREHAELTPVVETFSAYRQCEGDIAAAEDM 68

Query: 76  ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +     Q      +   +      Q   L     D  + +LE+ AG GG E+  +A
Sbjct: 69  LADPEMKEFAQAEIAEGKDKLEALDLELQKLLLPKDPNDDKNIFLEIRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+ +++ E +   + +  G K   + + G  AY  LK E G HR+ R+ 
Sbjct: 129 ADLLRMYTRYAERNRWQVEIVSASESDLGGYKEVIVRLVGQGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V    D+  E+ ++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATETQGRIHTSACTVAVMAEADEIAEVVLNPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+V +CQ  RSQH NKA A  +L A++Y+++L+++ +        K+ IG G    +
Sbjct: 249 IPTGIVAECQDGRSQHANKASAMQVLAARIYDIQLREKNQ--KEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       V+DGDL +   A +A ++
Sbjct: 307 IRTYNY-PQGRITDHRINLTLYKLDYVMDGDLAELTDALIAEQQ 349


>gi|53804790|ref|YP_113526.1| peptide chain release factor 1 [Methylococcus capsulatus str. Bath]
 gi|61214591|sp|Q60A21|RF1_METCA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|53758551|gb|AAU92842.1| peptide chain release factor 1 [Methylococcus capsulatus str. Bath]
          Length = 360

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 118/346 (34%), Positives = 178/346 (51%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N   R   +      P +  +    K L RE   L+  ++  +  ++ L        L
Sbjct: 9   LENLSHRFEEITGLLATPEVQNDQNRFKALSREYAQLEPCVACFRRYRETLEGLDHAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV---EYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +     K      +  Q   L     D  + +LEV AG GG E+  
Sbjct: 69  LQDPDPEVRSLAREELETGRKRCDALEQELQILLLPRDPNDERNVFLEVRAGTGGAEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE++ ++ E +   +GE  G K   + I G N Y  LK E G HR+ R
Sbjct: 129 FAGDLQRMYSRYAERQGWRAEIVSESEGEHGGYKEVVMRISGQNVYSRLKFEAGTHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ + P  DD +EI+I+ +D RIDT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPTTEAQGRIHTSACTVAILPEFDD-VEIDINPADLRIDTFRASGAGGQHVNRTDSAIRI 247

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG VV+CQ ERSQHKN+A+A ++L+A++     +K+     I  S K ++G G   
Sbjct: 248 THIPTGTVVECQDERSQHKNRARAMSLLQARILAAAQEKQNSE--IAASRKLQVGSGDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N+       +++GDLD  +   L   +
Sbjct: 306 ERIRTYNF-PQGRLTDHRINLTIYRLDAIMEGDLDPVIDPLLQEHQ 350


>gi|331270451|ref|YP_004396943.1| peptide chain release factor 1 [Clostridium botulinum BKT015925]
 gi|329127001|gb|AEB76946.1| peptide chain release factor 1 [Clostridium botulinum BKT015925]
          Length = 357

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 119/351 (33%), Positives = 196/351 (55%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  D    +   L+ K  DP +  N  E + L +E   L+  ++  +E ++   + + 
Sbjct: 1   MLDKLDFTENKYEELSIKISDPSVMANQNEWRKLCKEHAELETIVTKYREYKNNKEELVA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             EL  EE+D  + +   + ++ ++  +   +       L     D  + ++E+ AGAGG
Sbjct: 61  NKELLSEENDRDMKEMIQEEIKTLEESIVSDEEELKILLLPKDPNDDKNVFIEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE+  +KTE +  ++ +  G K    +++G +AY  +K E GV
Sbjct: 121 DEAALFAANLFRMYTRYAERHGWKTELMSANETDIGGFKEVVFMLRGDSAYSKMKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS +++ V P   D ++I+I  +D RID +RASG GGQ VNTTD
Sbjct: 181 HRVQRVPDTESSGRIHTSTATVAVLP-EVDDVDIQIDPNDIRIDVFRASGHGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+VV CQ E+SQ KNK +A  +L+A+LYE    +R   A+I    K+++G
Sbjct: 240 SAVRMTHIPTGIVVSCQDEKSQLKNKEKALKVLKARLYEKAEAER--AASISADRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V + R  +        LDGD+++ + A +  ++
Sbjct: 298 TGDRSERIRTYNY-PQGRVTEHRIGVTLYKLDAFLDGDMEEIIDALITAEQ 347


>gi|56707356|ref|YP_169252.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110669826|ref|YP_666383.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis FSC198]
 gi|224456424|ref|ZP_03664897.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254370940|ref|ZP_04986945.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254874190|ref|ZP_05246900.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|54112809|gb|AAV29038.1| NT02FT0149 [synthetic construct]
 gi|56603848|emb|CAG44824.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320159|emb|CAL08207.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis FSC198]
 gi|151569183|gb|EDN34837.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840189|gb|EET18625.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis MA00-2987]
          Length = 325

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 165/324 (50%), Positives = 221/324 (68%), Gaps = 3/324 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L +++  L+N +   + I + L     LLEL  E++        
Sbjct: 2   ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELGEEDESLMQEIAK 61

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
                  ++  E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 62  DTQNVASEI--EKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK    ++ DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPTDLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +KDLRT
Sbjct: 240 QHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIKDLRT 298

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
            +E T+   VLDGDLD F++A+L 
Sbjct: 299 GVENTNTQAVLDGDLDKFIEASLK 322


>gi|299133776|ref|ZP_07026970.1| peptide chain release factor 2 [Afipia sp. 1NLS2]
 gi|298591612|gb|EFI51813.1| peptide chain release factor 2 [Afipia sp. 1NLS2]
          Length = 322

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 201/309 (65%), Positives = 248/309 (80%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L+N +  I   +  L D + ++EL   E+D +++ E  + L+ +K +V  ++ E
Sbjct: 1   MQERTSLENQLGGIGRTERELEDQIGMIELGEAENDEAVVTEAENALKALKKDVARQELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWA+MLLRMYTRWAE++ FK E LE   GEEAGI
Sbjct: 61  ALLSGEADKFDTYLEVHAGAGGTESQDWASMLLRMYTRWAERKGFKVEYLEETQGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISPYDSN+RRHTSFSSI ++PVVD+SI+I+I+E
Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPYDSNARRHTSFSSIAIFPVVDNSIKIDINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ +  S VLDGDLD+
Sbjct: 241 EIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300

Query: 346 FMKATLAIK 354
           FM ATLA +
Sbjct: 301 FMAATLAQR 309


>gi|212711979|ref|ZP_03320107.1| hypothetical protein PROVALCAL_03055 [Providencia alcalifaciens DSM
           30120]
 gi|212685501|gb|EEB45029.1| hypothetical protein PROVALCAL_03055 [Providencia alcalifaciens DSM
           30120]
          Length = 360

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 116/340 (34%), Positives = 177/340 (52%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L +E   L +        +    D      L
Sbjct: 9   LEALQERYEEIEAHLADAGVIADQDRFRALSKEYAQLTDVAKCFTAWRTVQDDIETAQML 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE      +R +   +  Q   L     D  + ++E+ AGAGG E+  +A
Sbjct: 69  LDDPEMKEMAQEELKEAKERNEELEQQLQLLLLPKDPDDEYNCFVEIRAGAGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE  +++ E +   DGE  G K     I G + YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESNRWRVELMSTSDGEHGGYKEVIAKISGDSVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  +I + P + ++   EIS +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTIAILPELPEAELPEISPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++ + E+ KR   A      +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKAMSVLGARIRQAEMDKR--HAAEASERRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IR+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDTLIQPII 345


>gi|187917953|ref|YP_001883516.1| peptide chain release factor 2 [Borrelia hermsii DAH]
 gi|119860801|gb|AAX16596.1| bacterial peptide chain release factor 2 [Borrelia hermsii DAH]
          Length = 353

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 147/350 (42%), Positives = 221/350 (63%), Gaps = 4/350 (1%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
           ++    GG FD D    +L     +  + + W +  +A+ +++ +  L   I   +++  
Sbjct: 5   KKFKMSGGSFDKDKLKTQLKEYEKQINNENFWNDNKKAQEILKNQNILKAKIEPWEDLIF 64

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
           +L D   L E+A  E+D  +L +  + L+     +      S    + D ++A+L +H+G
Sbjct: 65  KLQDLRELCEIAESEEDTILLDKDINKLKEQYKHLLTI---SYFKEDIDISNAFLTIHSG 121

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGGTE+ DW +ML R+Y R++E+R +KTE +++ + E  GIKS T+ IKG  AYG+LK E
Sbjct: 122 AGGTEACDWVSMLYRIYLRYSERRGYKTELIDLLEAE-GGIKSVTIEIKGKYAYGFLKSE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G+HRLVRISP+D+  +RHTSF+S+++ PV+DD IEI I   D R+DTYRASGAGGQHVN
Sbjct: 181 IGIHRLVRISPFDAAKKRHTSFASVFIDPVIDDKIEIIIKPEDIRVDTYRASGAGGQHVN 240

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T SAVRITH+ TG+V Q Q +RSQH+NK  A  +L++KLYE      ++ +   +  K 
Sbjct: 241 KTSSAVRITHLQTGIVTQSQTDRSQHRNKELAMKVLKSKLYEHYKALEQQKSKSKQEEKK 300

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +I WG QIRSY+ QPY +VKD RT  E  +   V+DG++D+F++  L  K
Sbjct: 301 DISWGNQIRSYIFQPYTLVKDHRTKFENPNIISVMDGNIDNFIEEYLKWK 350


>gi|158521778|ref|YP_001529648.1| peptide chain release factor 2 [Desulfococcus oleovorans Hxd3]
 gi|158510604|gb|ABW67571.1| peptide chain release factor 2 [Desulfococcus oleovorans Hxd3]
          Length = 337

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 160/334 (47%), Positives = 221/334 (66%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             +RL+ +         W +   A  L++ER  L + +  + E+   + D  +LLELA E
Sbjct: 1   MRERLAEIEALVAREGAWDDPERAATLLKERSLLSDRLDLLSELGREVEDAEVLLELAEE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D     E +  ++ ++ ++E    +  LS E D  DA + ++AGAGGT++QDWA ML 
Sbjct: 61  EADSDAAAEVTRRVEGVRKKIEKLSIDLTLSDEDDPADAIVAINAGAGGTDAQDWAEMLF 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTRW E++ +K E ++   G+EAGIKSAT   KG NA+G+LK E GVHRLVRISP+++
Sbjct: 121 RMYTRWIERKGYKLEMIDHQPGDEAGIKSATFSAKGLNAFGYLKNESGVHRLVRISPFNA 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           + +R TSF+S++V+P +D  I+I+I E D RIDT+RASGAGGQHVN T SAVRITH P+G
Sbjct: 181 SGKRQTSFASVFVFPQIDRQIDIDIDEKDLRIDTFRASGAGGQHVNKTSSAVRITHYPSG 240

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           VVVQCQQERSQ +N+  A  +LRA+LY+LE  K+ +     E+ K +I WG QIRSY L 
Sbjct: 241 VVVQCQQERSQLRNREIAMAVLRARLYKLEKDKQNQKLQDMEAGKDDIAWGSQIRSYFLH 300

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           PYQ  KD RT+ E      VLDG++D F++A L 
Sbjct: 301 PYQKAKDHRTDFEIGDVYSVLDGEIDPFIEAVLM 334


>gi|256821856|ref|YP_003145819.1| peptide chain release factor 1 [Kangiella koreensis DSM 16069]
 gi|256795395|gb|ACV26051.1| peptide chain release factor 1 [Kangiella koreensis DSM 16069]
          Length = 364

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 116/346 (33%), Positives = 182/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               V R   ++    DP +  +  + + L +E   L+  ++  +  ++         E+
Sbjct: 10  LQGLVDRHEEISALLGDPDVIGDQNKFRDLSKEYSQLEEVVNTFQRYEEAEESLKAAEEM 69

Query: 76  ALEEDDCSILQETSDNLQ---RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             +ED         +      +I+L     Q   L     D  + +LE+ AG GG E+  
Sbjct: 70  LKDEDPDMREMAQEELKDAKGQIELLEVEMQKLLLPRDPNDDKNTFLEIRAGTGGDEAAI 129

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AEK++++ E +   DGE  G K   + I G + Y  LK E G HR+ R
Sbjct: 130 FAGDLFRMYSKYAEKKRWQVEVISQSDGEHGGYKEIIVRISGDSVYSHLKFESGAHRVQR 189

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI+ +D +IDT+RASGAGGQHVN TDSA+RI
Sbjct: 190 VPETESQGRIHTSACTVAVMPEADELDAIEINPADLKIDTFRASGAGGQHVNKTDSAIRI 249

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTGVVV+CQ ERSQHKNKA+A ++L+A+L   E  K    +   E  +  +G G   
Sbjct: 250 THLPTGVVVECQDERSQHKNKAKAMSVLQARLTAAEQAK--AQSEQTEMRRNLVGTGDRS 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N+      ++++GD+D  +   +   +
Sbjct: 308 DRIRTYNF-PQGRMTDHRINLTLYKLDEIMEGDIDQIVGPLIQEHQ 352


>gi|299065550|emb|CBJ36721.1| peptide chain release factor RF-1 [Ralstonia solanacearum CMR15]
          Length = 356

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 178/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R   +N          N+ + + L RE   ++  ++     +    D     EL
Sbjct: 5   LDQLAERTVEINALLAREDATANLDQYRKLTREHAEIEPVVAQYAAWKQAEDDVTTAQEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  +  ++     +          Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 65  LADPDMKAFAEDEIRAAREHMTTLEAELQRLLLPKDPNDHRNIFLEIRAGTGGDESALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+++++ E +     +  G K   + + G  AY  LK E G HR+ R+ 
Sbjct: 125 GDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIVRLVGEGAYSRLKFESGGHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D   +I+I+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 185 ATEAQGRIHTSACTVAVMPEADPLADIQINPADLRIDTFRASGAGGQHINKTDSAVRLTH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A+L +   Q+RE  A    + K+ IG G    +
Sbjct: 245 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKD--RQEREAQAKEASARKSLIGSGDRSDR 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++DGDL + + A  A  +
Sbjct: 303 IRTYNF-PQGRITDHRINLTLYKIDALMDGDLGELLGALAAEHQ 345


>gi|225175858|ref|ZP_03729851.1| peptide chain release factor 1 [Dethiobacter alkaliphilus AHT 1]
 gi|225168782|gb|EEG77583.1| peptide chain release factor 1 [Dethiobacter alkaliphilus AHT 1]
          Length = 356

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 120/351 (34%), Positives = 183/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD      +R   L     DP +     E + L +E   L   ++  +E Q    D   
Sbjct: 1   MFDKLKATEERFDELEKLISDPEVIARQDEWRKLTKEHSRLSEVVNAYREYQQVEQDLAE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
             E+  +  D  + +   D +     + E    +           D  +  +EV AG GG
Sbjct: 61  AKEMLRDGGDEEMSRFLKDEITANTEKKEELTEKLRLLLLPRDPNDDKNVIVEVRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE++ +KTE L+ ++ +  G K     I+G  AY  LK E GV
Sbjct: 121 DEAALFAGDLFRMYTRYAERQGWKTEVLDANETDIGGFKEVVFAIEGDGAYSRLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +E++I+++D RID + +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSAATVAVLP-EAEDVEVDINQNDLRIDVFCSSGPGGQSVNTTQ 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+P+G+VV CQ E+SQHKNK +A  +LRA+L+  E  + E  A    + KT++G
Sbjct: 240 SAVRITHLPSGIVVSCQDEKSQHKNKDKAMRVLRARLF--EKAQEEAAAEQAAARKTQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +        LDGDLD+ + A +  ++
Sbjct: 298 SGDRSERIRTYNF-PQGRVSDHRIGMTLYKLDQFLDGDLDEMVDALITSEQ 347


>gi|312877228|ref|ZP_07737197.1| peptide chain release factor 1 [Caldicellulosiruptor lactoaceticus
           6A]
 gi|311796037|gb|EFR12397.1| peptide chain release factor 1 [Caldicellulosiruptor lactoaceticus
           6A]
          Length = 355

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 117/343 (34%), Positives = 176/343 (51%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                ++   L  K  DP +     E + LM+E  +L   +   +E +  L       EL
Sbjct: 5   LQVIEEKYLELEKKIADPEIISQPQEWQKLMKEHSNLQPIVEKFREYKRILNTIKEAEEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              + D    +   + L   K + E  +       L     D  +  +E+ AGAGG E+ 
Sbjct: 65  LDTDLDEDFEKLVKEELNHAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE++ +K E +   + +  G K    +I G  AY  LK E GVHR+ 
Sbjct: 125 LFAAELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +E+EI E D  IDT+RA GAGGQHVN T+SAVR
Sbjct: 185 RVPVTESGGRIHTSTATVAVLP-EVEDVEVEIREEDLEIDTFRAGGAGGQHVNKTESAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           I H PTG+VV CQ ERSQH N+ +A  +LRA+LY+     +++        ++++G G  
Sbjct: 244 IVHKPTGIVVTCQDERSQHANRDRAMKILRARLYDYYQSIQQKEIE--SQRRSQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R  +       VLDG+LD+ + A +
Sbjct: 302 SERIRTYNF-PQGRVTDHRIGLTLYKLEQVLDGELDEIIDALI 343


>gi|302762182|ref|XP_002964513.1| hypothetical protein SELMODRAFT_64370 [Selaginella moellendorffii]
 gi|300168242|gb|EFJ34846.1| hypothetical protein SELMODRAFT_64370 [Selaginella moellendorffii]
          Length = 366

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 136/355 (38%), Positives = 208/355 (58%), Gaps = 3/355 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++ ++  L    D +     L+ L  +  DP  W+   +A+ ++ E   + + ++  K  
Sbjct: 12  VAARVRQLLDSADLEQQEAVLADLENQASDPAFWEERSKAQKILSELNEIKDRVNLYKTF 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQ--RIKLEVEYKQFESLLSGEADSNDAYLE 120
           + ++ D   ++EL  E +      +         I   ++  +   LLSG  D   A + 
Sbjct: 72  RAKVDDAQCIVELLEEMESPDAALKLEAAETVSWITAAMDRFELNKLLSGTYDKEGARIT 131

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + AGAGGT++QDWA MLLRMY RWA +  FK+  +E   GEEAGIKSATL I G  AYG+
Sbjct: 132 ITAGAGGTDAQDWAEMLLRMYQRWATRSGFKSTVVESSPGEEAGIKSATLEIDGRYAYGY 191

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAG 239
           + GE+G HRLVR SP++S   R TSF+ + V P+  +  IE+EI E D  I T R+ G G
Sbjct: 192 ISGEKGTHRLVRQSPFNSKGLRQTSFAGVEVMPLLEESEIEVEIPEGDLEITTCRSGGKG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ+VN  ++AVR+THIPTG+ ++C +ERSQ +NK +A  +L++KL  +  ++R       
Sbjct: 252 GQNVNKVETAVRVTHIPTGIALRCSEERSQLQNKIKAIALLKSKLLVILEEQRAAEIKEI 311

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                +  WG+QIR+YV  PY++VKDLRTN+E +  S ++DG+L+  + A L  K
Sbjct: 312 RGDVVKAEWGQQIRNYVFHPYKLVKDLRTNVETSDISGIMDGNLEPLLTAYLMSK 366


>gi|187925494|ref|YP_001897136.1| peptide chain release factor 1 [Burkholderia phytofirmans PsJN]
 gi|238689472|sp|B2SZ27|RF1_BURPP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|187716688|gb|ACD17912.1| peptide chain release factor 1 [Burkholderia phytofirmans PsJN]
          Length = 360

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 118/344 (34%), Positives = 181/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN       +  N+ + + L RE   L   +      +  + D     EL
Sbjct: 9   LDQLTTRLAELNDLLSREDITSNLDQYRKLTREHAELGPVVDHYALWRQAMNDATTAQEL 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +       ++      +R++      Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 69  LADASMRDFAEDEIRAARERMEKLGAELQKMLLPKDPNDDRNIFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE+ +++ E +   + +  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYLRFAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQHKNK +A  +L A++ +   Q  E+ A    + K+ IG G    +
Sbjct: 249 LPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QSHEQQAKEAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++DGDLD+ + A ++  +
Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELIAALVSEHQ 349


>gi|75675907|ref|YP_318328.1| peptide chain release factor 2 [Nitrobacter winogradskyi Nb-255]
 gi|74420777|gb|ABA04976.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrobacter
           winogradskyi Nb-255]
          Length = 322

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 199/309 (64%), Positives = 251/309 (81%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L+++++ I +++  L D + ++EL   E+D +++ E+ + L+ +K EV+ ++ E
Sbjct: 1   MQERTSLEDSLAGIGKVERELEDQIGMIELGEAENDEAVIDESENALKALKKEVDRRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWA MLLRMYTRWAEKR FK E LE   GEEAGI
Sbjct: 61  ALLSGEADRFDTYLEVHAGAGGTESQDWAAMLLRMYTRWAEKRGFKVEYLEETPGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ + G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PVVDDSI+I+I E
Sbjct: 121 KSATVQVSGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVVDDSIKIDIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R DT R+ GAGGQHVN T+SAVR+TH+PTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHVPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL++REE A   +++KT+IGWG QIRSYVLQPYQMVKDLRT ++ +  S VLDG+LDD
Sbjct: 241 EIELKRREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGNLDD 300

Query: 346 FMKATLAIK 354
           FM ATLA +
Sbjct: 301 FMAATLAQR 309


>gi|17547620|ref|NP_521022.1| peptide chain release factor 1 [Ralstonia solanacearum GMI1000]
 gi|20139328|sp|Q8XVD0|RF1_RALSO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|17429924|emb|CAD16608.1| probable peptide chain release factor 1 (rf-1) protein [Ralstonia
           solanacearum GMI1000]
          Length = 360

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 178/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R   +N          N+ + + L RE   L+  ++     +    D     EL
Sbjct: 9   LDQLAERTVEINALLAREDATANLDQYRKLTREHAELEPVVAQYAAWKQAEDDVTTAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  +  ++     +          Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 69  LADPDMKAFAEDEIRAARERMTTLEAELQRLLLPKDPNDHRNIFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+++++ E +     +  G K   + + G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIVRLVGEGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D   +I+I+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 189 ATEAQGRIHTSACTVAVMPEADPLADIQINPADLRIDTFRASGAGGQHINKTDSAVRLTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A+L +   Q+RE  A    + K+ IG G    +
Sbjct: 249 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKD--RQEREAQAKEASARKSLIGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++DGDL + + A  A  +
Sbjct: 307 IRTYNF-PQGRITDHRINLTLYKIDALMDGDLGELLGALAAEHQ 349


>gi|206890162|ref|YP_002248216.1| peptide chain release factor 1 [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|238054474|sp|B5YIQ7|RF1_THEYD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|206742100|gb|ACI21157.1| peptide chain release factor 1 [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 353

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 174/344 (50%), Gaps = 10/344 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
               +   +     DP ++ N  E     RE+  L+  ++  +E +  L       E+  
Sbjct: 7   EVENKYEKITQTLSDPKVFSNKDEYMKYSREQAELEPIVTKFREYKRILKQIEEAEEMIK 66

Query: 78  EEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             D         +  Q  K++ +     +   L     D  +  LE+ AG GG E+  +A
Sbjct: 67  SGDPDLKELAEEELQQLKKIKPQIEQELKVLLLPKDPRDEKNVILEIRAGTGGEEAALFA 126

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY ++AE + +K E ++ H     G K     I G  A+  LK E GVHR+ RI 
Sbjct: 127 ANLFRMYAKYAESKGWKVEIIDSHPTGLGGFKEIIATISGKGAFSKLKYESGVHRVQRIP 186

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +++ R HTS +++ V P   + ++I+I E D RIDT+ +SG GGQ VNT  SAVRI H
Sbjct: 187 VTEASGRIHTSTATVAVLP-EAEEVDIKIDEKDLRIDTFCSSGPGGQSVNTAYSAVRIVH 245

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG++VQCQ ERSQ KN+ +A  +LRA+L E+E QK+E         K ++G G    +
Sbjct: 246 IPTGIIVQCQDERSQIKNREKAMKVLRARLLEIERQKKEAER--AAERKGQVGTGERSER 303

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R  +       VL+G++D+ + A ++  +
Sbjct: 304 IRTYNF-PQNRVTDHRIGLTLYKLEQVLNGNIDEIIDALISYYQ 346


>gi|182420270|ref|ZP_02951499.1| peptide chain release factor 1 [Clostridium butyricum 5521]
 gi|237666557|ref|ZP_04526542.1| peptide chain release factor 1 [Clostridium butyricum E4 str. BoNT
           E BL5262]
 gi|182375865|gb|EDT73457.1| peptide chain release factor 1 [Clostridium butyricum 5521]
 gi|237657756|gb|EEP55311.1| peptide chain release factor 1 [Clostridium butyricum E4 str. BoNT
           E BL5262]
          Length = 360

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 125/347 (36%), Positives = 189/347 (54%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    +   L+ K  DP + QN  E + L +E   L+  ++  KE +    D     E+
Sbjct: 6   LEFIENKYDELSVKISDPSIMQNQNEWRKLCKEHADLEIIVNAYKEYKKVTEDLEANKEM 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE+D  + +  S+ +  +       +       L     D  + ++E+  GAGG E+ 
Sbjct: 66  LSEENDKEMREMLSEEISDLTKREVELENHIQILLLPKDPNDDKNVFVEIRGGAGGEEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE +++  E + +++ +  G K    +IKG  AY  LK E GVHR+ 
Sbjct: 126 LFAYNLFRMYTRYAETQRWAVEIMSLNETDLGGFKEVVFMIKGNGAYSKLKYESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS S++ V P   D +EIEISE D RID +RASG GGQ VNTTDSAVR
Sbjct: 186 RVPDTESSGRIHTSTSTVAVLP-EVDDVEIEISEKDLRIDVFRASGNGGQCVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+P+G+VV CQ E+SQ KNK +A  +L+++LY  E  +RE    I E  K+++G G  
Sbjct: 245 ITHLPSGLVVSCQDEKSQLKNKEKAMKVLKSRLY--EQAERERAEGIAEDRKSQVGTGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +        L+GD+D+ + A +   +
Sbjct: 303 SERIRTYNY-PQGRVTDHRIGLTLYKLETFLNGDIDEMINALITADQ 348


>gi|125558711|gb|EAZ04247.1| hypothetical protein OsI_26391 [Oryza sativa Indica Group]
          Length = 457

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 130/358 (36%), Positives = 213/358 (59%), Gaps = 4/358 (1%)

Query: 1   MKLS-RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
           ++L+  ++  +      D   + ++ L  K+ D  LW +  +A+ ++     + + +  +
Sbjct: 89  VELALARVGEVRQSAGLDQLEEEIASLEKKSADSSLWDDPSKAQEILVALTEVKDRVKLL 148

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSGEADSNDA 117
            +++ ++ +   +++L  E D          +         ++  +   LLSG  D   A
Sbjct: 149 NDLKSQVEEAETIVKLTEELDSIDTGLLEEASKIIKALNKALDNFEMTQLLSGPYDKEGA 208

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            + + AGAGGT++QDWA+MLLRMY RW EK+++KT  +E   GEEAGIKSAT+ ++G  A
Sbjct: 209 VINITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSATIELEGRYA 268

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRAS 236
           YG+L GE+G HR+VR SP+++   R TSF+ + V P+  ++S+++EI E D  I   RA 
Sbjct: 269 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESMDVEIPEEDLEISFTRAG 328

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ+VN  ++AVR+ HIPTG+ V+C +ERSQ  NK +A + L+AKL  +  ++R    
Sbjct: 329 GKGGQNVNKVETAVRMVHIPTGIAVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEI 388

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                   +  WG+QIR+YV  PY++VKD+RT  E +  + V+DG+LD F++A L  K
Sbjct: 389 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTACETSDITGVMDGELDTFIRAYLKYK 446


>gi|82703392|ref|YP_412958.1| peptide chain release factor 2 [Nitrosospira multiformis ATCC
           25196]
 gi|82411457|gb|ABB75566.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrosospira
           multiformis ATCC 25196]
          Length = 310

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 160/308 (51%), Positives = 223/308 (72%), Gaps = 1/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
            RE++ L++ +  ++ I  +L D   L E+A EEDD + LQ  + ++  ++  V   +F 
Sbjct: 2   GREKKILESVVINLETISRQLQDARELFEMAEEEDDDATLQSVARDISHLEKAVSDMEFR 61

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            + S   D+N+ ++++ +G+GGTE+QDWA ML RMY R+ E+R ++ E +E   GE AGI
Sbjct: 62  RMFSNPMDTNNCFVDIQSGSGGTEAQDWAAMLERMYLRYCERRGYQVEVMEESPGEVAGI 121

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSA+L I G  AYG+L+ E GVHRLVR SP+DS +RRHTSF+S++VYP VD++IEI+I+ 
Sbjct: 122 KSASLKISGEYAYGYLRTETGVHRLVRKSPFDSGNRRHTSFASVFVYPEVDETIEIDINP 181

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D R+DT+RASGAGGQH+N TDSAVRITH PTG+VVQCQ  RSQH+N+A A  ML+++LY
Sbjct: 182 ADLRVDTFRASGAGGQHINKTDSAVRITHNPTGIVVQCQSGRSQHRNRADAMAMLKSRLY 241

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KR E     E +KT+IGWG QIRSYVL     +KDLRT +E  +   +LDGDLDD
Sbjct: 242 EAELRKRNEEKQAIEDTKTDIGWGHQIRSYVLD-QARIKDLRTGVESGNTQAILDGDLDD 300

Query: 346 FMKATLAI 353
           F++A+L  
Sbjct: 301 FIEASLKQ 308


>gi|83747499|ref|ZP_00944537.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Ralstonia
           solanacearum UW551]
 gi|83725813|gb|EAP72953.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Ralstonia
           solanacearum UW551]
          Length = 374

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 178/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R   +N          N+ + + L RE   L+  ++     +    D     EL
Sbjct: 23  LDQLAERTIEINALLAREDATANLDQYRKLTREHAELEPVVTQYAVWKQAENDVATAQEL 82

Query: 76  ALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  +  ++       R+       Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 83  LADPDMKAFAEDELRVARDRMTALEAELQRLLLPKDPNDHRNIFLEIRAGTGGDESALFA 142

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+++++ E +     +  G K     + G  AY  LK E G HR+ R+ 
Sbjct: 143 GDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLKFESGGHRVQRVP 202

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D   +I+I+ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 203 ATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDTFRASGAGGQHINKTDSAVRITH 262

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A+L +   Q+RE  A    + K+ IG G    +
Sbjct: 263 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKD--RQEREAQAKEASARKSLIGSGDRSDR 320

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       ++DGDLD+ +    A  +
Sbjct: 321 IRTYNF-PQGRVTDHRINLTLYKIDALMDGDLDELLGTLAAEHQ 363


>gi|260772290|ref|ZP_05881206.1| peptide chain release factor 1 [Vibrio metschnikovii CIP 69.14]
 gi|260611429|gb|EEX36632.1| peptide chain release factor 1 [Vibrio metschnikovii CIP 69.14]
          Length = 362

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 117/339 (34%), Positives = 178/339 (52%), Gaps = 9/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72
            ++ V+R   +     DP +  +  + + L +E   L+      +  Q    D      +
Sbjct: 9   LESLVERYEEVQHLLGDPAVIGDQNKFRSLSKEYSQLEEVTKCFQAYQQAQEDFVAAEEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +    E       E       I+      Q   L     D  + +LE+ AGAGG E+  
Sbjct: 69  TKEDDAEMREMAQDEMKAAKAEIERLSAELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AEK+ ++ E +   + E  G K     + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRFAEKKGWRIEVMSASEAEHGGYKEMIAKVNGDGAYGVLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P + ++   EI  SD +IDT+R+SGAGGQHVNTTDSA+RI
Sbjct: 189 VPATESQGRVHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR     I ++ +  +G G   
Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLGARIVQAEEKKRAAE--ISDTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +IR+Y   P   V D R N+     ++V++GDL   + 
Sbjct: 307 DRIRTYNY-PQSRVSDHRINLTIYRLNEVMEGDLQALID 344


>gi|89257152|ref|YP_514514.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica LVS]
 gi|115315491|ref|YP_764214.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica OSU18]
 gi|156503377|ref|YP_001429442.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|254368376|ref|ZP_04984394.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica 257]
 gi|254368387|ref|ZP_04984404.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|89144983|emb|CAJ80343.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica LVS]
 gi|115130390|gb|ABI83577.1| peptide chain release factor B [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134254184|gb|EBA53278.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica 257]
 gi|156253980|gb|ABU62486.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|157121281|gb|EDO65482.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 325

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 165/324 (50%), Positives = 220/324 (67%), Gaps = 3/324 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L +++  L+N +   + I + L     LLEL  E++        
Sbjct: 2   ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELGEEDESLMQEIAK 61

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
                  ++  E  +F  + SG+ D+N A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 62  DTQNVASEI--EKLEFRRMFSGKMDANKAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK    ++ DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +KDLRT
Sbjct: 240 QHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIKDLRT 298

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
            +E T+   VLDGDLD F++A+L 
Sbjct: 299 GVENTNTQAVLDGDLDKFIEASLK 322


>gi|39935519|ref|NP_947795.1| peptide chain release factor 2 [Rhodopseudomonas palustris CGA009]
 gi|39649371|emb|CAE27894.1| translation peptide releasing factor RF-2 [Rhodopseudomonas
           palustris CGA009]
          Length = 322

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 201/309 (65%), Positives = 251/309 (81%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+ER  L+++++ I +++  L DN+ ++EL   E D  I++E  D L+ +K EV  ++ E
Sbjct: 1   MQERTSLEDSLTGIGKVERELTDNIEMIELGEAEGDEGIVKEAEDALKALKKEVARRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD  D YLEVHAGAGGTESQDWA+MLLRMY RWAEK  FK E LE  +GEEAGI
Sbjct: 61  ALLSGEADRFDTYLEVHAGAGGTESQDWASMLLRMYVRWAEKHGFKIEYLEESEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I G NAYGWLK E GVHRLVRISP+DSN+RRHTSFSS+ ++PV+D+SI+I+I+E
Sbjct: 121 KSATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVIDNSIKIDIAE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R+DT R+ GAGGQHVN T+SAVR+THIPTGV V CQ  RSQHKN+AQAW+MLRA+LY
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KREE A   +++KTEIGWG QIRSYVLQPYQMVKDLRT ++ +  + VLDGDLD+
Sbjct: 241 EIELKKREEQAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300

Query: 346 FMKATLAIK 354
           FM ATLA +
Sbjct: 301 FMAATLAQR 309


>gi|114326944|ref|YP_744101.1| peptide chain release factor 2 [Granulibacter bethesdensis CGDNIH1]
 gi|114315118|gb|ABI61178.1| bacterial peptide chain release factor 2 (RF-2) [Granulibacter
           bethesdensis CGDNIH1]
          Length = 323

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 187/302 (61%), Positives = 237/302 (78%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRER  L + +  +  ++  + D   L E+A  + D ++  +    L+ I  E +  + E
Sbjct: 2   MRERTRLASQVEGVLRMESEVSDATELAEMAEADGDEAMATDARRMLETIAAEAKRLEIE 61

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD NDAYLE+++GAGGTE+QDWA MLLRMYTRWAE   +K   +E  DGE+AGI
Sbjct: 62  SLLSGEADGNDAYLEINSGAGGTEAQDWAEMLLRMYTRWAEAHGYKVTLIEQSDGEQAGI 121

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATL + GP+AYGWLK E GVHRLVRISP+DS +RR TSF+SIWVYPVVDD+IEIEI+E
Sbjct: 122 KSATLQVAGPSAYGWLKTEAGVHRLVRISPFDSAARRQTSFASIWVYPVVDDNIEIEINE 181

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D ++DT+RASGAGGQHVN T+SA+RITH+P+G++V CQ +RSQH+N+A A NML+A+LY
Sbjct: 182 ADLKVDTFRASGAGGQHVNKTESAIRITHVPSGIIVACQTDRSQHRNRATAMNMLKARLY 241

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E ELQKRE  A   E++K+EIGWG QIRSYVL PYQ+VKDLRTN+EK +P  VLDGDLD+
Sbjct: 242 EAELQKREAAAQEQENAKSEIGWGHQIRSYVLAPYQLVKDLRTNVEKGNPGAVLDGDLDE 301

Query: 346 FM 347
           FM
Sbjct: 302 FM 303


>gi|70732476|ref|YP_262238.1| peptide chain release factor 1 [Pseudomonas fluorescens Pf-5]
 gi|119361580|sp|Q4K695|RF1_PSEF5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|68346775|gb|AAY94381.1| peptide chain release factor 1 [Pseudomonas fluorescens Pf-5]
          Length = 360

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 116/346 (33%), Positives = 176/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +  + +   +E   ++  ++  K++     D      L
Sbjct: 9   LDILQDRFEELTALLGDAEVISDQAKFRAYSKEYAEVEPIVATYKQVLKVQADLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +  +  +         Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LKDNDPDLREMAAEEVREAKEQLAELESSLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAERRGWRLEILSENEGEHGGYKEVIARVEGESVYGKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI+ +D RIDTYR+SGAGGQHVN TDSA+RI
Sbjct: 189 VPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRIDTYRSSGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIP+G+VV+CQ+ERSQHKN+A+A + L AKL +   Q       I    K  +G G   
Sbjct: 249 THIPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAANAIASERKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+   S  ++L G ++  ++  LA  +
Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYSLDEILAGGVEAVIEPLLAEYQ 351


>gi|331002270|ref|ZP_08325789.1| peptide chain release factor 1 [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330411364|gb|EGG90780.1| peptide chain release factor 1 [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 355

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 112/350 (32%), Positives = 186/350 (53%), Gaps = 11/350 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68
           +FD  ++ V     +  +     +  +    + LM+E+  L   +    E +       D
Sbjct: 1   MFDNLEDIVIHYDEIMAELAGGDVANDQNRFRKLMKEQSDLAPLVETYGEYKKAKQLQED 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
            L +LE+  +E      +E ++  +  +   E  +   L     D  +  LE+ AGAGG 
Sbjct: 61  ALEMLEMNDDEMKEMAKEELAEGKRLEEELSEKLKILLLPKDPNDEKNIMLEIRAGAGGD 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY  +AE + +K E +++++    G K    ++ G  AY  LK E GVH
Sbjct: 121 EAALFAMQLYRMYVHYAETQNWKVEMIDVNENGIGGYKEVVAMVSGKGAYSKLKYESGVH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS +S+ V P   + ++++I  +D RID  RASG GGQ VNTTDS
Sbjct: 181 RVQRVPETESGGRIHTSTASVAVMP-EAEEVDVQIDMNDVRIDVMRASGNGGQCVNTTDS 239

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KLYE+EL+K++  +      +++IG 
Sbjct: 240 AVRLTHYPTGIVIYSQTEKSQLQNKEKAFALLRSKLYEIELEKKQ--SAEAADRRSQIGT 297

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G    +IR+Y   P   V D R N+       +++GD+ + +   +A  +
Sbjct: 298 GDRSEKIRTYNF-PQGRVTDHRINLTLYKLDKIMNGDIQELIDGCIAADQ 346


>gi|291524540|emb|CBK90127.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium
           rectale DSM 17629]
          Length = 358

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 115/351 (32%), Positives = 182/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ +     L     +P +  +    K LM+E+  L   +   K+ ++   +   
Sbjct: 1   MFDKLEDLIHHYEELMNLLSEPDVANDANRFKKLMKEQSDLAPIVETYKKYKECKQNIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   + L+  K +     +  +   L     D  +  +E+ AGAGG
Sbjct: 61  SLAILNEESDEEMRELAKEELKDSKEQVEELEKELKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE R +K E L+  +    G+KS   ++KG  AY  LK E GV
Sbjct: 121 EEAALFAAEIYRMYVHYAENRGWKVETLDADETGIGGMKSVEFMVKGSGAYSILKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R  TS  S+ V P  +D       +    ID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESQGRIQTSTCSVAVMPEAEDVDVKIDDKDIR-IDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR KLY++ELQK+++     E  +++IG
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQIQNKEKAFALLRTKLYDMELQKKQD--AEAEERRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R N+       +L+GD+ + + A +A  +
Sbjct: 298 TGDRAEKIRTYNF-PQGRVTDHRINLTLYKLDKILNGDIQEIIDACIAADQ 347


>gi|326423672|ref|NP_759262.2| peptide chain release factor 1 [Vibrio vulnificus CMCP6]
 gi|32171537|sp|Q8DFF9|RF1_VIBVU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|46576703|sp|Q7MMY6|RF1_VIBVY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|319999027|gb|AAO08789.2| peptide chain release factor 1 [Vibrio vulnificus CMCP6]
          Length = 362

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 117/346 (33%), Positives = 181/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  +  + + L +E   L+         +    D +   E+
Sbjct: 9   LEMLVERYEEVQHLLGDPGVIGDQDKFRALSKEYSQLEEVTKCFTAYKQAQEDLVAAEEM 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           A E+D         +       I+      Q   L     D  + +LE+ AGAGG E+  
Sbjct: 69  AKEDDAEMREMAQEEIKAAKVAIEDLAAELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AEKR ++ E +  ++ E  G K     + G  AYG+LK E G HR+ R
Sbjct: 129 FAGDLFRMYSKFAEKRGWRIEVMSANEAEHGGYKEMIAKVNGDGAYGFLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ + P + ++   EI  SD +IDT+R+SGAGGQHVNTTDSA+RI
Sbjct: 189 VPATESQGRVHTSACTVAIMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E  KR     + ++ +  +G G   
Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEAKRAAE--VSDTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+     S+V++GDL   +   +   +
Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTIYRLSEVMEGDLQSLIDPVIQEHQ 351


>gi|322421625|ref|YP_004200848.1| peptide chain release factor 1 [Geobacter sp. M18]
 gi|320128012|gb|ADW15572.1| peptide chain release factor 1 [Geobacter sp. M18]
          Length = 359

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 114/351 (32%), Positives = 181/351 (51%), Gaps = 11/351 (3%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN- 69
            +FD   +   R   L +   DP +  N  E + L +E   L   I+  +E +  L D  
Sbjct: 2   SMFDRIADLETRFEELESLLSDPEVLANQGEFRKLSKEHSGLAELIAAYREYKKVLADIG 61

Query: 70  --LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
               LL+   +E       E     +R +      +   L     D  +  LE+ AG GG
Sbjct: 62  DNRELLKEPDQEMREMAQAELESLEERREQLESEIKVLLLPKDPNDDKNVVLEIRAGTGG 121

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            ES  +A  L RMY+R+AE  +++ E +   + E+ G K    L++G   +  LK E G 
Sbjct: 122 DESALFAGDLFRMYSRFAEVNRWRVEVISASESEKGGFKEVIALVEGAGVFAKLKYESGT 181

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS  ++ V P   + ++I+I+ +D +ID YR+SGAGGQHVNTTD
Sbjct: 182 HRVQRVPETEAQGRIHTSACTVAVMP-EAEDVDIDINPADLKIDVYRSSGAGGQHVNTTD 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG VV CQ+ERSQ KN+A+A  +L++++ +  L ++   A +    K+++G
Sbjct: 241 SAVRITHIPTGTVVACQEERSQIKNRAKAMKVLKSRILDNILMEQN--AKLAADRKSQVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   + D R  +       ++ GD+ +   +  A  +
Sbjct: 299 SGDRSERIRTYNF-PQGRMTDHRIGLTLYRLDAIMAGDIGEIADSLRAHYQ 348


>gi|229588283|ref|YP_002870402.1| peptide chain release factor 1 [Pseudomonas fluorescens SBW25]
 gi|259585227|sp|C3KDC6|RF1_PSEFS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229360149|emb|CAY47006.1| peptide chain release factor 1 [Pseudomonas fluorescens SBW25]
          Length = 360

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 116/346 (33%), Positives = 175/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +  + +   +E   ++  ++  K +     D      L
Sbjct: 9   LDVLQDRFEELTALLGDGEVISDQAKFRAYSKEYAEVEPIVATYKHLTKVQADLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +  +  +   E     Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LKDSDPDMREMAVEEVREAKEKLAELEGDLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G N YG LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+RI
Sbjct: 189 VPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+P+G+VV+CQ+ERSQHKN+A+A + L AKL +   Q       I    K  +G G   
Sbjct: 249 THLPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAANAIASERKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y       V D R N+   S  ++L G +D  ++  LA  +
Sbjct: 307 ERIRTYNFA-QGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLAEYQ 351


>gi|239933740|ref|ZP_04690693.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
          Length = 359

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 139/350 (39%), Positives = 204/350 (58%), Gaps = 6/350 (1%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  +  + D D     ++ L  +   P LW N  EA+ +     HL   +   + ++ R+
Sbjct: 1   MESIEAVLDLDRMRADIAVLEEQAAAPSLWDNPDEAQKITSRLSHLQAEVRKAEALRGRI 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D  +L E+A EEDD     E    L  ++  ++  +  +LLSGE D+ +A + + A AG
Sbjct: 61  DDLAVLFEMAEEEDDPDTRAEAEAELADVRKALDEMEVRTLLSGEYDAREALVNIRAEAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G ++ D+A  L RMY RWAE+  +KTE  E    EEAGIKS T  ++ P AYG L  EQG
Sbjct: 121 GVDAADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLSVEQG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HRLVRISP+D+  RR TSF+ + V PVV+ S  ++I ESD R+D YR+SG    +   +
Sbjct: 181 THRLVRISPFDNQGRRQTSFAGVEVLPVVEQSDHVDIDESDLRVDVYRSSGPSC-NPRDS 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           D  VRITH+PTG++     ERS+ +NK  A N+L+A+L     ++R+E     ++ K E 
Sbjct: 240 DFMVRITHLPTGIMASSDSERSRTRNKVTAMNVLKARLLG---RRRQEEQAKMDALKDEG 296

Query: 307 G--WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           G   G Q+RSY L PYQMVKDLRT  E  +P  V +G++D F++A +  +
Sbjct: 297 GNPCGNQVRSYELHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGIRWR 346


>gi|157412537|ref|YP_001483403.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9215]
 gi|157387112|gb|ABV49817.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT
           9215]
          Length = 354

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 139/344 (40%), Positives = 204/344 (59%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L  +FD      +   L   +  P  W+N  EAK  M     +   +  + + +  + D 
Sbjct: 2   LRIVFDVPRLKAKRRELEQISAQPAFWENQEEAKKQMLILDDVKAQLELLDKWKTFISDA 61

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              LEL   E +  ++ E+   L++++  ++  +FE LL GE D   A + ++AGAGGT+
Sbjct: 62  NASLELYSLEPEEEMILESKQGLKKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGGTD 121

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW  +LLRMY+RWA+  +      E+  GEEAGIKS T  I G  AYG+L+ E+G HR
Sbjct: 122 AQDWVEILLRMYSRWADNNQMSLVINELSQGEEAGIKSVTFEIDGKYAYGYLQHEKGTHR 181

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+++N +R TSF+ + V P +DD+I ++I E D  I T R+ GAGGQ+VN  ++A
Sbjct: 182 LVRISPFNANGKRQTSFAGVEVMPKLDDNISLDIPEKDLEITTSRSGGAGGQNVNKVETA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRI H+P+G+ V+C QERSQ +NK +A  +L++KL  +  ++R       +    E  WG
Sbjct: 242 VRIVHLPSGISVRCTQERSQLQNKEKAMLLLKSKLLVIAKEQRAAEVADIKGDIVEAAWG 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIR+YV  PYQMVKDLRT  E      VLDG L+ F+   L +
Sbjct: 302 NQIRNYVFHPYQMVKDLRTMQETNDLDSVLDGGLEPFIHELLRM 345


>gi|226531101|ref|NP_001152654.1| peptide chain release factor 2 [Zea mays]
 gi|195658609|gb|ACG48772.1| peptide chain release factor 2 [Zea mays]
 gi|223950205|gb|ACN29186.1| unknown [Zea mays]
          Length = 449

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 130/358 (36%), Positives = 212/358 (59%), Gaps = 4/358 (1%)

Query: 1   MKLS-RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
           ++L+  ++N +          + ++ L  K+ D  LW +  +A+ ++     + + +  +
Sbjct: 85  VELALERVNEVRQSAGLQQLEEDIASLENKSSDSSLWDDPSKAQGILVSLTEVKDKVKLL 144

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSGEADSNDA 117
            + + ++ +   +++L  E D          +         ++  +   LLSG  D   A
Sbjct: 145 NDFKLQIEEAETIVKLTEELDSIDTGLLEEASKIIKALNKALDNFEMTQLLSGPYDKEGA 204

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            + + AGAGGT++QDWA+MLLRMY RW EK+++KT  +E   GEEAGIKSAT+ ++G  A
Sbjct: 205 VINISAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSATVELEGRYA 264

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRAS 236
           YG+L GE+G HR+VR SP+++   R TSF+ + V P+  ++S+ ++I E D  I   RA 
Sbjct: 265 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESMAVDIPEEDLEISFTRAG 324

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ+VN  ++AVR+ HIPTG+ V+C +ERSQ  NK +A + L+AKL  + L++R    
Sbjct: 325 GKGGQNVNKVETAVRMVHIPTGIAVRCSEERSQLANKIKALSRLKAKLLVIALEQRASEI 384

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                   +  WG+QIR+YV  PY++VKD+RT  E +  + V+DG+LD F++A L  K
Sbjct: 385 KQIRGDIVKAEWGQQIRNYVFHPYKLVKDVRTGCETSDITGVMDGELDPFIRAYLKYK 442


>gi|261343909|ref|ZP_05971554.1| peptide chain release factor 1 [Providencia rustigianii DSM 4541]
 gi|282568295|gb|EFB73830.1| peptide chain release factor 1 [Providencia rustigianii DSM 4541]
          Length = 360

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 118/340 (34%), Positives = 179/340 (52%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L +E   L +  +     Q    D      L
Sbjct: 9   LEALQERYEEIQAHLADAGVIADQDRFRALSKEYAQLTDVANCFTAWQAVQEDIETAQML 68

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   +  +E  D  +R +   +  Q   L     D  + ++E+ AGAGG E+  +A
Sbjct: 69  LDDPEMKEMAQEELKDAKERNEELEQQLQLLLLPKDPDDEYNCFVEIRAGAGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE  +++ E +   DGE  G K     I G + YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESNRWRVELMSTSDGEHGGYKEVIAKISGDSVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  +I V P + ++   EIS +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTIAVLPELPEAELPEISPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++ + E+ KR E        +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKAMSVLGARIRQAEMAKRHE--AEASERRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IR+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDTLIQPII 345


>gi|146296536|ref|YP_001180307.1| peptide chain release factor 1 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|166223538|sp|A4XJN1|RF1_CALS8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145410112|gb|ABP67116.1| bacterial peptide chain release factor 1 (bRF-1)
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 355

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 118/343 (34%), Positives = 178/343 (51%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                ++   L  K  DP +  N  E + LM+E  +L   +   +E +  +       EL
Sbjct: 5   LQVIEEKYLELEKKISDPEIINNNQEWQKLMKEHSNLQPIVEKFREYKRIIKTIEEAEEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D    +   + L + K + E  +       L     D  +  +E+ AGAGG E+ 
Sbjct: 65  LDTNLDEDFEKLVKEELNQAKEQKEIVERELKILLLPKDPNDEKNVIMEIRAGAGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE++ +K E +   + +  G K    +I G  AY  LK E GVHR+ 
Sbjct: 125 LFAAELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +E+EI E D  I+T+RA GAGGQHVN T+SAVR
Sbjct: 185 RVPVTESGGRIHTSTATVAVLP-EVEDVEVEIREEDLEIETFRAGGAGGQHVNKTESAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH PTG+VV CQ ERSQH N+ +A  +LRA+LY+     +++        ++++G G  
Sbjct: 244 ITHKPTGIVVSCQDERSQHANRDRAMKILRARLYDYYQSLQQKEIE--SQRRSQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R  +       VLDGDLD+ + A +
Sbjct: 302 SERIRTYNF-PQGRVTDHRIGLTLYKLEQVLDGDLDEIIDALI 343


>gi|224419024|ref|ZP_03657030.1| peptide chain release factor 2 [Helicobacter canadensis MIT
           98-5491]
 gi|253827969|ref|ZP_04870854.1| peptide chain release factor 2 [Helicobacter canadensis MIT
           98-5491]
 gi|313142536|ref|ZP_07804729.1| peptide chain release factor 2 [Helicobacter canadensis MIT
           98-5491]
 gi|253511375|gb|EES90034.1| peptide chain release factor 2 [Helicobacter canadensis MIT
           98-5491]
 gi|313131567|gb|EFR49184.1| peptide chain release factor 2 [Helicobacter canadensis MIT
           98-5491]
          Length = 363

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 171/350 (48%), Positives = 231/350 (66%), Gaps = 4/350 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +   +  +        R+  + +  +    W++  +A    +E++     +   KE
Sbjct: 12  ELEIKRQNIEKIMQPSQLQSRIEEIESLEQQKEFWEDSKKAGEYQKEKKRCLRQLEKYKE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
               L D   L EL+ ++++             ++ +++  + E +LSGE DSN+A   +
Sbjct: 72  ASLALSDAKELFELSSDDEETLNELFN--EAPMLEEQIKKAEIEVMLSGELDSNNAIFTI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
             GAGGTESQDWA+ML RMY RWAE+  FK E L+  +G+EAGIK A+ +IKG NAYG+ 
Sbjct: 130 TPGAGGTESQDWASMLYRMYLRWAERCGFKVELLDYQEGDEAGIKDASFIIKGENAYGYT 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVRISP+DSN++RHTSF+S+ V P +DD+I IEI E D RIDTYRASGAGGQ
Sbjct: 190 KVENGIHRLVRISPFDSNAKRHTSFASVQVTPEIDDNISIEIEEKDLRIDTYRASGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N T+SA+RITHIPTG+VVQCQ +RSQHKNKA A  ML++KLYELE QKR E   I   
Sbjct: 250 HINKTESAIRITHIPTGIVVQCQNDRSQHKNKATALKMLKSKLYELEQQKRNE--QIAND 307

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            K+EIGWG QIRSYVL PYQ VKDLR+NI  ++   +LDGD+D  ++  L
Sbjct: 308 DKSEIGWGHQIRSYVLAPYQQVKDLRSNIAYSNVEAILDGDIDSILEGVL 357


>gi|238923860|ref|YP_002937376.1| peptide chain release factor 1 [Eubacterium rectale ATCC 33656]
 gi|259585240|sp|C4Z911|RF1_EUBR3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238875535|gb|ACR75242.1| peptide chain release factor 1 [Eubacterium rectale ATCC 33656]
          Length = 358

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 115/351 (32%), Positives = 182/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ +     L     +P +  +    K LM+E+  L   +   K+ ++   +   
Sbjct: 1   MFDKLEDLIHHYEELMNLLSEPDVANDANRFKKLMKEQSDLAPIVETYKKYKECKQNIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   + L+  K +     +  +   L     D  +  +E+ AGAGG
Sbjct: 61  SLAILDEESDEEMRELAKEELKDSKEQVEELEKKLKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE R +K E L+  +    G+KS   ++KG  AY  LK E GV
Sbjct: 121 EEAALFAAEIYRMYVHYAENRGWKVETLDADETGIGGMKSVEFMVKGSGAYSILKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R  TS  S+ V P  +D       +    ID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESQGRIQTSTCSVAVMPEAEDVDVKIDDKDIR-IDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR KLY++ELQK+++     E  +++IG
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQIQNKEKAFALLRTKLYDMELQKKQD--AEAEERRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R N+       +L+GD+ + + A +A  +
Sbjct: 298 TGDRAEKIRTYNF-PQGRVTDHRINLTLYKLDKILNGDIQEIIDACIAADQ 347


>gi|328675334|gb|AEB28009.1| Peptide chain release factor 2 [Francisella cf. novicida 3523]
          Length = 325

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 166/324 (51%), Positives = 221/324 (68%), Gaps = 3/324 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L +++  L+N +   + I + L     LLELA E++        
Sbjct: 2   ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEHISETLETLSELLELAEEDETLMQEIAK 61

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
                  ++  E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 62  DTQDVASEI--EKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK     + DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVSVDNVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +KDLRT
Sbjct: 240 QHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIKDLRT 298

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
            +E T+   VLDGDLD F++A+L 
Sbjct: 299 GVENTNTQAVLDGDLDKFIEASLK 322


>gi|37679115|ref|NP_933724.1| peptide chain release factor 1 [Vibrio vulnificus YJ016]
 gi|320157139|ref|YP_004189518.1| peptide chain release factor 1 [Vibrio vulnificus MO6-24/O]
 gi|37197857|dbj|BAC93695.1| protein chain release factor A [Vibrio vulnificus YJ016]
 gi|319932451|gb|ADV87315.1| peptide chain release factor 1 [Vibrio vulnificus MO6-24/O]
          Length = 363

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 117/346 (33%), Positives = 181/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  +  + + L +E   L+         +    D +   E+
Sbjct: 10  LEMLVERYEEVQHLLGDPGVIGDQDKFRALSKEYSQLEEVTKCFTAYKQAQEDLVAAEEM 69

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           A E+D         +       I+      Q   L     D  + +LE+ AGAGG E+  
Sbjct: 70  AKEDDAEMREMAQEEIKAAKVAIEDLAAELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 129

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AEKR ++ E +  ++ E  G K     + G  AYG+LK E G HR+ R
Sbjct: 130 FAGDLFRMYSKFAEKRGWRIEVMSANEAEHGGYKEMIAKVNGDGAYGFLKFESGGHRVQR 189

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ + P + ++   EI  SD +IDT+R+SGAGGQHVNTTDSA+RI
Sbjct: 190 VPATESQGRVHTSACTVAIMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRI 249

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E  KR     + ++ +  +G G   
Sbjct: 250 THLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEAKRAAE--VSDTRRNLLGSGDRS 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+     S+V++GDL   +   +   +
Sbjct: 308 DRIRTYNY-PQGRVSDHRINLTIYRLSEVMEGDLQSLIDPVIQEHQ 352


>gi|328676241|gb|AEB27111.1| Peptide chain release factor 2 [Francisella cf. novicida Fx1]
          Length = 325

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 166/324 (51%), Positives = 221/324 (68%), Gaps = 3/324 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L +++  L+N +   + I + L     LLELA E++        
Sbjct: 2   ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELAEEDESLMQEIAK 61

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
                  ++  E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 62  DTQNVASEI--EKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADGH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK     + DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVSVDNVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +KDLRT
Sbjct: 240 QHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIKDLRT 298

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
            +E T+   VLDGDLD F++A+L 
Sbjct: 299 GVENTNTQAVLDGDLDKFIEASLK 322


>gi|293602161|ref|ZP_06684612.1| peptide chain release factor RF1 [Achromobacter piechaudii ATCC
           43553]
 gi|292819431|gb|EFF78461.1| peptide chain release factor RF1 [Achromobacter piechaudii ATCC
           43553]
          Length = 356

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 178/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   RL+ ++     P    ++   + L RER  L+  +           D     E+
Sbjct: 5   LEHLCNRLTEVDALLAQPETASDMDRFRKLSRERAELEPVVEAFTAFARTEEDLATAQEM 64

Query: 76  ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  ++ ++     +   +      Q   L     D    +LE+ AG GG ES  ++
Sbjct: 65  LSDPDMKAMAEDEIKTGRVKLESLESALQLLLLPRDPNDGRSVFLEIRAGTGGDESALFS 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE R ++ E +     E  G K     I G  AYG LK E G HR+ R+ 
Sbjct: 125 GDLLRMYTRYAETRGWRVELMSESASELGGYKEVIARIDGDGAYGRLKFESGAHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V    D+  EI I+ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 185 ATEAQGRIHTSACTVAVMAEADEMSEIVINANDLRIDTFRASGAGGQHINKTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A+L + E ++R+  +      K+ IG G    +
Sbjct: 245 LPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKETRERQ--SKEAAERKSLIGTGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       +++GDL++   A +A  +
Sbjct: 303 IRTYNF-PQGRVTDHRINLTLYKLQQIMEGDLEELTGALIAEHQ 345


>gi|254526132|ref|ZP_05138184.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9202]
 gi|221537556|gb|EEE40009.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9202]
          Length = 354

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 139/344 (40%), Positives = 204/344 (59%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L  +FD      +   L   +  P  W+N  EAK  M     +   +  + + +  + D 
Sbjct: 2   LRIVFDVPRLKAKRRELEQISAQPAFWENQEEAKKQMLILDDVKAQLELLDKWKTFISDA 61

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              LEL   E +  ++ E+   L++++  ++  +FE LL GE D   A + ++AGAGGT+
Sbjct: 62  NASLELYSLEPEEEMILESKQGLKKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGGTD 121

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW  +LLRMY+RWA+  +      E+  GEEAGIKS T  I G  AYG+L+ E+G HR
Sbjct: 122 AQDWVEILLRMYSRWADNNQMTLVINELSQGEEAGIKSVTFEIDGKYAYGYLQHEKGTHR 181

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+++N +R TSF+ + V P +DD+I ++I E D  I T R+ GAGGQ+VN  ++A
Sbjct: 182 LVRISPFNANGKRQTSFAGVEVMPKLDDNISLDIPEKDLEITTSRSGGAGGQNVNKVETA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRI H+P+G+ V+C QERSQ +NK +A  +L++KL  +  ++R       +    E  WG
Sbjct: 242 VRIVHLPSGISVRCTQERSQLQNKEKAMLLLKSKLLVIAKEQRAAEVADIKGDIVEAAWG 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIR+YV  PYQMVKDLRT  E      VLDG L+ F+   L +
Sbjct: 302 NQIRNYVFHPYQMVKDLRTMQETNDLDSVLDGGLEPFIHELLRM 345


>gi|208780604|ref|ZP_03247943.1| peptide chain release factor 2 [Francisella novicida FTG]
 gi|254373627|ref|ZP_04989111.1| peptide chain release factor 2 [Francisella novicida GA99-3548]
 gi|151571349|gb|EDN37003.1| peptide chain release factor 2 [Francisella novicida GA99-3548]
 gi|208743579|gb|EDZ89884.1| peptide chain release factor 2 [Francisella novicida FTG]
          Length = 325

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 166/324 (51%), Positives = 220/324 (67%), Gaps = 3/324 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L +++  L+N +   + I + L     LLEL  E++        
Sbjct: 2   ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELGEEDESLMQEIAK 61

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
                  ++  E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 62  DTQNVASEI--EKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADGH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK     I DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVSVDNISDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +KDLRT
Sbjct: 240 QHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIKDLRT 298

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
            +E T+   VLDGDLD F++A+L 
Sbjct: 299 GVENTNTQAVLDGDLDKFIEASLK 322


>gi|254372144|ref|ZP_04987636.1| peptide chain release factor 2 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151569874|gb|EDN35528.1| peptide chain release factor 2 [Francisella novicida GA99-3549]
          Length = 325

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 166/324 (51%), Positives = 220/324 (67%), Gaps = 3/324 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L +++  L+N +   + I + L     LLEL  E++        
Sbjct: 2   ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLNELLELGEEDESLMQEIAK 61

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
                  ++  E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 62  DTQNVASEI--EKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADGH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK     I DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVSVDNISDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +KDLRT
Sbjct: 240 QHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIKDLRT 298

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
            +E T+   VLDGDLD F++A+L 
Sbjct: 299 GVENTNTQAVLDGDLDKFIEASLK 322


>gi|146296348|ref|YP_001180119.1| peptide chain release factor 2 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409924|gb|ABP66928.1| bacterial peptide chain release factor 2 (bRF-2)
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 323

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 160/313 (51%), Positives = 218/313 (69%)

Query: 40  IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV 99
             ++ ++++ + L + I   +++  +  D  +L +L +EE +  +  E   +L  ++ ++
Sbjct: 2   ENSQKVLQQIKRLKDKIERYQKLYSQWEDLKVLTQLCIEESNIEMSDELEKDLIDLERKI 61

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
           E  + E LL+G  D N+A L +HAGAGGTE+QDWA MLLRMYTRWA K+ +K E L+I  
Sbjct: 62  EEFKLEILLNGPYDKNNAILSIHAGAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILP 121

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
           GEEAGIK+ T+ I G NAYG+LK E+GVHRLVRISP+D+  RRHTSF+++ V P V+D  
Sbjct: 122 GEEAGIKNVTVRIVGENAYGYLKAEKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDT 181

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           +IEI E D  IDT+RASGAGGQHVN T+SAVRI HIPTG+VV CQ ERSQHKN+  A  +
Sbjct: 182 DIEIKEEDLEIDTFRASGAGGQHVNKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKI 241

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           L+AKL EL  ++R E     +  +TEIGWG QIRSYV  PY +VKD RT+ E  +   V+
Sbjct: 242 LKAKLLELREKERREKIQKLKGEQTEIGWGNQIRSYVFCPYTLVKDHRTDAEVGNVEAVM 301

Query: 340 DGDLDDFMKATLA 352
           DG++D F+ A L 
Sbjct: 302 DGEIDVFINAYLK 314


>gi|46406291|emb|CAG25777.1| putative translation releasing factor 2 [Cucumis sativus]
          Length = 453

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 136/354 (38%), Positives = 206/354 (58%), Gaps = 3/354 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           S ++  +          Q L+ L +K  D   W +  +A+ ++     + + I  + + +
Sbjct: 91  SERVEEIRNSAGLLQLDQELADLESKAADNSFWDDRSKAQKVLMAMTDVKDKIKMLTDFK 150

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSGEADSNDAYLEV 121
            ++ +   +++L  E D   +                ++  +   LLSG  D   A + +
Sbjct: 151 TQVEEAETIVKLTEEMDSVDVGLLEEATKIIKDLNKALDQFELSELLSGPYDKEGAVISI 210

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGT++QDWA+MLLRMY RW EK+++KT  +E   GEEAGIKSAT+ I+G  AYG++
Sbjct: 211 SAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSAGEEAGIKSATIEIEGRYAYGYI 270

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGG 240
            GE+G HR+VR SP++S   R TSFS + V P+  D+S+ +E+ E D  I   RA G GG
Sbjct: 271 SGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPDESMNVELPEEDLEISFSRAGGKGG 330

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN  ++AVRITHIPTGV V+C +ERSQ  NK +A + L+AKL  +  ++R        
Sbjct: 331 QNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIR 390

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               +  WG+QIR+YV  PY++VKD+RT  E +    V+DG+L+ F+KA L  K
Sbjct: 391 GDAVKAEWGQQIRNYVFHPYKLVKDVRTGYETSDIVSVMDGELEPFIKAYLKYK 444


>gi|312793258|ref|YP_004026181.1| peptide chain release factor 1 [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312180398|gb|ADQ40568.1| peptide chain release factor 1 [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 355

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 117/343 (34%), Positives = 177/343 (51%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                ++   L  K  DP +     E + LM+E  +L   +   +E +  L       EL
Sbjct: 5   LQVIEEKYLELEKKIADPEIISQPQEWQKLMKEHSNLQPIVEKFREYKRILNTIKEAEEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              + D    +   + L + K + E  +       L     D  +  +E+ AGAGG E+ 
Sbjct: 65  LDTDLDEDFEKLVKEELNQAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE++ +K E +   + +  G K    +I G  AY  LK E GVHR+ 
Sbjct: 125 LFAAELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +E+EI E D  IDT+RA GAGGQHVN T+SAVR
Sbjct: 185 RVPVTESGGRIHTSTATVAVLP-EVEDVEVEIREEDLEIDTFRAGGAGGQHVNKTESAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           I H PTG+VV CQ ERSQH N+ +A  +LRA+LY+     +++        ++++G G  
Sbjct: 244 IVHKPTGIVVTCQDERSQHANRDRAMKILRARLYDYYQSIQQKEIE--SQRRSQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R  +       VLDG+LD+ + A +
Sbjct: 302 SERIRTYNF-PQGRVTDHRIGLTLYKLEQVLDGELDEIIDALI 343


>gi|324997823|ref|ZP_08118935.1| peptide chain release factor 2 [Pseudonocardia sp. P1]
          Length = 368

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 153/353 (43%), Positives = 222/353 (62%), Gaps = 2/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D     Q +  L+ +   P LW +V  A+ +     +    +  + ++
Sbjct: 12  LDTTLSSIEAVADVPRLRQEIEELSEQAGRPDLWDDVEAAQKITSRLAYAQGDLRRLDDL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L ELA +E D + + +   +  R++ E+   +  +LLSGE D  +A + + 
Sbjct: 72  RRRLDDLPVLYELAEDEGDQAAVADADADRARLRSEIASLEVRTLLSGEYDEREALVTIR 131

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RWAE+  + T+  E    EEAGIKSAT  +  P A+G L 
Sbjct: 132 SEAGGIDAADFAEMLLRMYLRWAERHGYGTDVFETSYAEEAGIKSATFAVHAPYAFGTLS 191

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRLVRISP+D+  RR TSF+ + V PVV+ S  +EI E D R+D +RASG GGQ 
Sbjct: 192 VEAGTHRLVRISPFDNQGRRQTSFAGVEVAPVVESSDHVEIDEKDLRVDVFRASGPGGQG 251

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+THIPTG+VV CQ ERSQ +NKA A  +L+AKL +   Q+  E+ +  + S
Sbjct: 252 VNTTDSAVRLTHIPTGIVVACQNERSQLQNKASAMVVLQAKLLDRRRQEERELMDSFKDS 311

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +   WG Q+R+YVL PYQ+VKDLRT  E+ +PS VLDG++DDF++A +  ++
Sbjct: 312 GS--SWGNQMRNYVLHPYQLVKDLRTEHEEGNPSQVLDGEIDDFIEAGIRWRR 362


>gi|213967224|ref|ZP_03395373.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato T1]
 gi|301381040|ref|ZP_07229458.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
           Max13]
 gi|302060378|ref|ZP_07251919.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
           K40]
 gi|302134868|ref|ZP_07260858.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213928066|gb|EEB61612.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato T1]
          Length = 360

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 117/346 (33%), Positives = 175/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  ++  K++     D      L
Sbjct: 9   LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYKQLARVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +  +  +         Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LKDSDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+P+G+VV+CQ+ERSQHKN+A+A + L AKL +   Q       I    K  +G G   
Sbjct: 249 THLPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAANAIASERKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+   S  +VL G +D  ++  LA  +
Sbjct: 307 ERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQ 351


>gi|148981991|ref|ZP_01816579.1| peptide chain release factor 1 [Vibrionales bacterium SWAT-3]
 gi|145960679|gb|EDK26023.1| peptide chain release factor 1 [Vibrionales bacterium SWAT-3]
          Length = 362

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 114/346 (32%), Positives = 182/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  +  + + L +E   L+      +  Q    D     ++
Sbjct: 9   LETLVERYEEVQHLLGDPDVIGDQNKFRALSKEYSQLEEVTKCFQAYQQAQDDLEAAEDM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           A E+D+        +  +  +         Q   L     D  + +LE+ AGAGG E+  
Sbjct: 69  AQEDDEEMREMAQEEIKEAKEAIERLTDELQILLLPKDPNDERNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AEK+ ++ E +  +D E+ G K     + G   YG +K E G HR+ R
Sbjct: 129 FAGNLFRMYSKFAEKKGWRVEVMSSNDSEQGGYKEMIAKVSGEGVYGVMKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RI
Sbjct: 189 VPETESQGRVHTSACTVAVMPEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E ++R     + ++ +  +G G   
Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAE--VSDTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+     ++VL+GD+   +   L   +
Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTLYRLNEVLEGDMQSLIDPVLQEHQ 351


>gi|329296264|ref|ZP_08253600.1| peptide chain release factor 1 [Plautia stali symbiont]
          Length = 360

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 115/337 (34%), Positives = 177/337 (52%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     +E Q    D      L
Sbjct: 9   LEALQERHEEVEALLGDAGVIGDQDRFRALSREYAQLSDVTRCFREWQQVQEDVETAEML 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE     +  +  +E +    L      D    ++EV AG GG E+  +A
Sbjct: 69  LDDAEMRDMAQEELKLSRDKREVLEQQLQVLLLPKDPDDERPCFIEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +  +DGE  G K     I G  AYG +K E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWQVEIMSANDGEHGGYKEVIARITGDGAYGRMKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +I+  D +IDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVMPKLPEAELPDINPGDLKIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A  +L A+++  E+ KR+  A    + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALAVLGARIHAAEMAKRQ--AAEASTRRNLLGSGDSSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           IR+Y   P   V D R N+      + ++G LD  ++
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDTLIE 342


>gi|239831796|ref|ZP_04680125.1| peptide chain release factor 2 [Ochrobactrum intermedium LMG 3301]
 gi|239824063|gb|EEQ95631.1| peptide chain release factor 2 [Ochrobactrum intermedium LMG 3301]
          Length = 321

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 200/309 (64%), Positives = 258/309 (83%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ L+++I+ I  +   L D++ L+ +  EE+D SI+Q+  + ++ +K E++ +Q +
Sbjct: 1   MRERQQLEDSINGINHLTQTLNDSIELIAMGEEENDKSIIQDAENTIRELKEEIDRRQID 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGEAD+ND Y+EVHAGAGGTESQDWA+MLLRMYTRWAE+   K E +E+H+GEEAGI
Sbjct: 61  MLLSGEADANDTYVEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+KG N+YG +K E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+I+++++E
Sbjct: 121 KSATILVKGHNSYGMMKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIDVQVTE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY
Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KRE   +   ++KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG +  
Sbjct: 241 EEELKKREAATDAANATKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGSVTP 300

Query: 346 FMKATLAIK 354
           FM+A LA +
Sbjct: 301 FMEAALAHR 309


>gi|88861344|ref|ZP_01135974.1| Peptide chain release factor 1 (RF-1) [Pseudoalteromonas tunicata
           D2]
 gi|88816610|gb|EAR26435.1| Peptide chain release factor 1 (RF-1) [Pseudoalteromonas tunicata
           D2]
          Length = 361

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 114/346 (32%), Positives = 178/346 (51%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72
            +  V+R   +     +  +  +    + L +E   L++        +    D      +
Sbjct: 9   LETLVERYEEVEALLSEASVISDQDRFRALSKEYAELEDVSKVFNAYRQAEQDLVAAEEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +    +       E      +++   +  Q   L     D+N+ YLEV AG GG E+  
Sbjct: 69  FKDEDPDMRDMAQDEFKAAKAQLETLTDELQVLMLPKDPKDNNNVYLEVRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY R+AE +K+K E +  ++GE  G K     I G   YG LK E GVHR+ R
Sbjct: 129 FAGDLFRMYARFAETQKWKVEIVSANEGEHGGYKEVIANISGTGVYGKLKFESGVHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P + ++  IEI+ +D ++DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRVHTSACTVAVMPEIPEAEAIEINAADIKVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTGVVV+CQ ERSQHKN+A+A ++L ++L + E +KR          +  +G G   
Sbjct: 249 THIPTGVVVECQDERSQHKNRAKAMSVLASRLQQAEDEKRHAE--EATQRRNLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N+     ++++ GDL   +   +   +
Sbjct: 307 ERIRTYNY-PQGRITDHRINLTLYKLNEIVSGDLLPIINPLVQEHQ 351


>gi|300702903|ref|YP_003744504.1| peptide chain release factor rf-1 [Ralstonia solanacearum CFBP2957]
 gi|299070565|emb|CBJ41860.1| peptide chain release factor RF-1 [Ralstonia solanacearum CFBP2957]
          Length = 356

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 179/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R   +N          N+ + + L RE   L+  ++     +    D     EL
Sbjct: 5   LDQLAERTVEINALLAREDATANLDQYRKLTREHAELEPVVAQYATWKQAEDDVATAQEL 64

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  +  ++      +R+       Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 65  LADPDMKAFAEDELRAARERMTALEAELQRLLLPKDPNDHRNIFLEIRAGTGGDESALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+++++ E +     +  G K     + G  AY  LK E G HR+ R+ 
Sbjct: 125 GDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLKFESGGHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D   +I+I+ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 185 ATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDTFRASGAGGQHINKTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A+L +   Q+RE  A    + K+ IG G    +
Sbjct: 245 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKD--RQEREAQAKEASARKSLIGSGDRSDR 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       ++DGDLD+ +    A  +
Sbjct: 303 IRTYNF-PQGRVTDHRINLTLYKIDALMDGDLDELLGTLAAEHQ 345


>gi|94500761|ref|ZP_01307290.1| peptide chain release factor 2 [Oceanobacter sp. RED65]
 gi|94427083|gb|EAT12064.1| peptide chain release factor 2 [Oceanobacter sp. RED65]
          Length = 310

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 167/308 (54%), Positives = 217/308 (70%), Gaps = 1/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
            RER  L+  +  I ++   L D   LL++++ EDD   + E    L  ++ ++E  +F 
Sbjct: 2   GRERSALEAVVQTIDDMDTGLSDCDELLQMSVAEDDADSVDEVVSELNELQAKLEKLEFR 61

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            + SGEAD N AYL++ AG+GGTE+QDWA M+LRMY RW E + FK E +E   G+ AGI
Sbjct: 62  RMFSGEADENSAYLDIQAGSGGTEAQDWAEMILRMYLRWGEAKGFKVELMEASAGDVAGI 121

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+  +G  A+GWL+ E GVHRLVR SP+DS+ RRHTSF+S++V P +DD+IEI+I+ 
Sbjct: 122 KSATIRFEGEYAFGWLRTETGVHRLVRKSPFDSSGRRHTSFASVFVSPEIDDNIEIDINP 181

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RID YRASGAGGQHVNTT+SAVRITH+PT  V QCQ +RSQHKNK QA   L+AKL+
Sbjct: 182 ADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVTQCQNQRSQHKNKDQAMKQLKAKLF 241

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           ELE+QKR       E SK++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD 
Sbjct: 242 ELEMQKRNADTQALEESKSDIGWGSQIRSYVLDD-ARIKDLRTGVENRNTQQVLDGALDP 300

Query: 346 FMKATLAI 353
           FM+A+L  
Sbjct: 301 FMEASLKA 308


>gi|237737785|ref|ZP_04568266.1| peptide chain release factor 1 [Fusobacterium mortiferum ATCC 9817]
 gi|229419665|gb|EEO34712.1| peptide chain release factor 1 [Fusobacterium mortiferum ATCC 9817]
          Length = 358

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 120/347 (34%), Positives = 181/347 (52%), Gaps = 10/347 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   LN     P +  +  +     +    +   +   KE +    D   + E 
Sbjct: 5   LEEVVRRFDELNEMLGSPEILSDPKKMMECNKALADITPLVEKYKEYKTLSEDLQFIKEN 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +  ++  + ++ ++   + E         E D  +  +E+  GAGG E+ 
Sbjct: 65  IRNEKDHDMREMMNEEQKELEEKLPEYEKELKILLLPKDENDDKNVIVEIRGGAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE+RK+K E +E  +    GIK A   I G  AY  LK E GVHR+ 
Sbjct: 125 LFAGDLFRMYNRYAERRKWKVEIIEKQEIGIGGIKEAVFSINGLGAYSRLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P V+D  E++I   D +IDTYR+ GAGGQHVN TDSAVR
Sbjct: 185 RVPETESAGRVHTSTATVAVLPEVEDVKEVKIDPKDLKIDTYRSGGAGGQHVNMTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VVQCQ ERSQ KN+ +A   L +KLYE+E +K+   + +    K ++G G  
Sbjct: 245 ITHLPTGIVVQCQDERSQLKNREKAMKHLVSKLYEMECEKQR--SQVESERKLQVGTGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R           LDGD+D+ + A +   +
Sbjct: 303 SEKIRTYNF-PQGRITDHRIKFTVYQLDAFLDGDIDEMIDALITFNQ 348


>gi|325273244|ref|ZP_08139524.1| peptide chain release factor 1 [Pseudomonas sp. TJI-51]
 gi|324101621|gb|EGB99187.1| peptide chain release factor 1 [Pseudomonas sp. TJI-51]
          Length = 360

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 121/346 (34%), Positives = 175/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   L     D  +  +    +   RE   ++   +  KE +    D      L
Sbjct: 9   LEILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWRKVQDDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE---VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +  +  +         Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LKDSDPDMREMAVEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AEKR ++ E L  ++GE  G K     ++G N YG LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYRASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ+ERSQHKN+A+A + L AKL +  +Q       I    K  +G G   
Sbjct: 249 THLPTGIVVECQEERSQHKNRARAMSWLSAKLND--MQTSAAQNAIASERKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+   S  D+L G +D  ++  LA  +
Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYSLDDILSGGVDAVIEPLLAEYQ 351


>gi|306820801|ref|ZP_07454426.1| peptide chain release factor RF1 [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551191|gb|EFM39157.1| peptide chain release factor RF1 [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 357

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 113/351 (32%), Positives = 185/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+      ++ S L  K  DP +  N  + + LM+E   L   +   +E      D   
Sbjct: 1   MFENLGAVKEKFSELEKKISDPEIINNQEQWQKLMKEHADLSPVVKKYEEYLKANDDIKG 60

Query: 72  LLELALEEDDCSILQETSDNLQRIK----LEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             E+   E D  +     + L  ++      ++  +   L     D  +  +E+  GAGG
Sbjct: 61  AKEIIANESDEDLRDLAKEELSGLEEDLTKIIDELKILLLPKDPNDDKNVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A +L RMY+ +A  R++K E +  ++ E  G K    +I G  AY  LK E GV
Sbjct: 121 DEAALFAGVLFRMYSMYAANRRWKVELMSSNETEIGGYKEVVFMITGKGAYSRLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + +E+ +  +D R+D +R+SG GGQ VNTTD
Sbjct: 181 HRVQRVPETESQGRIHTSTVTVAVLP-EAEDVEVNLDLNDVRVDVFRSSGNGGQSVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+  Q E+SQ KNK +A+ +L+AKLY++EL+K+++   +    K+++G
Sbjct: 240 SAVRLTHIPTGIVISMQDEKSQLKNKDKAFKILKAKLYDMELEKKQKE--MASQRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V + R  +        L+GDLD+ + A +   +
Sbjct: 298 TGDRAERIRTYNY-PQGRVSEHRIGLNLYKLESFLNGDLDEIIDALITTDQ 347


>gi|148260683|ref|YP_001234810.1| peptide chain release factor 2 [Acidiphilium cryptum JF-5]
 gi|326403877|ref|YP_004283959.1| peptide chain release factor 2 [Acidiphilium multivorum AIU301]
 gi|146402364|gb|ABQ30891.1| bacterial peptide chain release factor 1 (bRF-1) [Acidiphilium
           cryptum JF-5]
 gi|325050739|dbj|BAJ81077.1| peptide chain release factor 2 [Acidiphilium multivorum AIU301]
          Length = 323

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 191/309 (61%), Positives = 239/309 (77%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           +RER  L      +  I+    D L L ELA  E D S+L E    L+RI  E + ++ E
Sbjct: 2   LRERNRLATQTEAVHTIERETEDALTLAELAEAEGDQSVLAEAEAALRRISEEAKRREIE 61

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLL+GEAD ND YLEV+AGAGGTE+QDWA MLLRMYTRWAE+  +K   LE  +GE+AGI
Sbjct: 62  SLLAGEADGNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTMLEESEGEQAGI 121

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ + G NAYGWLK E GVHRLVRISP+D+N+RR TSF+S+WVYPVVDDSIE+EI+ 
Sbjct: 122 KSATIQVSGMNAYGWLKTEAGVHRLVRISPFDANARRQTSFASVWVYPVVDDSIEVEINP 181

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D ++DT+RASGAGGQHVN T+SA+RITH+P+G++V CQ +RSQH+N+A A  ML+++LY
Sbjct: 182 ADLKVDTFRASGAGGQHVNKTESAIRITHVPSGIIVACQNDRSQHRNRATAMEMLKSRLY 241

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+ELQKREE A   ES+K +IGWG QIRSYVL PYQ+VKDLRTN E  +P  VL+GDLD 
Sbjct: 242 EMELQKREEAAAASESAKRDIGWGHQIRSYVLAPYQLVKDLRTNFESGNPDAVLNGDLDA 301

Query: 346 FMKATLAIK 354
           FM A+LA +
Sbjct: 302 FMAASLASR 310


>gi|257791746|ref|YP_003182352.1| peptide chain release factor 2 [Eggerthella lenta DSM 2243]
 gi|317487783|ref|ZP_07946376.1| peptide chain release factor 2 [Eggerthella sp. 1_3_56FAA]
 gi|325831767|ref|ZP_08164956.1| peptide chain release factor 2 [Eggerthella sp. HGA1]
 gi|257475643|gb|ACV55963.1| peptide chain release factor 2 [Eggerthella lenta DSM 2243]
 gi|316913058|gb|EFV34574.1| peptide chain release factor 2 [Eggerthella sp. 1_3_56FAA]
 gi|325486436|gb|EGC88886.1| peptide chain release factor 2 [Eggerthella sp. HGA1]
          Length = 364

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 145/353 (41%), Positives = 211/353 (59%), Gaps = 2/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           K+++++    G    D     L+ L+ +   P  W +   A+ + ++   L + I+   E
Sbjct: 11  KVAQRVEAAHGYLHIDERAAELAKLDEEIAQPGFWDDASHAQSVSKQASVLRDTIAEYDE 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
                  +       L  +D    +E S  L ++   ++  +  S  S   D  DA L V
Sbjct: 71  --AAALLDDARAAFDLASEDELFAEEASAALDKLDELLDALEISSWFSERFDGGDAILTV 128

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           + G+GG E+QDW +ML RMY R+AEK+ +K   L++  GE  G+  AT+ I+G NA+G L
Sbjct: 129 NPGSGGLEAQDWTDMLYRMYVRYAEKKDWKVTVLDVVPGEGIGLDKATIQIEGRNAFGML 188

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISP D   RRHT+F+ + V PV+ D IE++++ +D R+D YR+SG GGQ
Sbjct: 189 KSESGVHRLVRISPTDDKKRRHTTFAGVEVLPVLPDDIEVDLNPADVRVDVYRSSGPGGQ 248

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVR+THIPT +VV CQ E+SQ +NK  A+ +L+AKLYE E QKR+E       
Sbjct: 249 CVNTTDSAVRLTHIPTNIVVTCQNEKSQLQNKEAAFRVLKAKLYEREEQKRQEELAELRG 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + +  +G QIR+YVL PYQMVKD+R+ IE  +   VLDG+LD+F+      +
Sbjct: 309 DRMDNTFGSQIRNYVLYPYQMVKDVRSGIETGNVDAVLDGELDEFVIGYHRWR 361


>gi|167766740|ref|ZP_02438793.1| hypothetical protein CLOSS21_01246 [Clostridium sp. SS2/1]
 gi|167711494|gb|EDS22073.1| hypothetical protein CLOSS21_01246 [Clostridium sp. SS2/1]
          Length = 366

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 121/352 (34%), Positives = 181/352 (51%), Gaps = 12/352 (3%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            +FD  +  V RL  +  +  DP +  N    + LM+E+  L   +   KE +    +  
Sbjct: 9   KMFDKLEGLVDRLDTVLQELNDPDVAGNQNRFRDLMKEQNELTPIVEKYKEYKAEKQNIE 68

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAG 126
             L L  EE D  + +   + L   K  VE  +       +     D  +  +E+ AGAG
Sbjct: 69  DSLMLLEEESDEEMKELAKEELNESKANVERLEEELKILLIPKDPMDDKNIIVEMRAGAG 128

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +   + RMY  +AE +++K   L  ++    G K    ++ G  AY   K E G
Sbjct: 129 GDEAGLFVADVARMYRSYAESKRWKVNTLSFNESGIGGFKELVFMVSGQGAYSRFKYESG 188

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ RI   +S  R HTS  ++ + P   + +E+EI  +DC+ D +RASG GGQ VNTT
Sbjct: 189 VHRVQRIPATESGGRIHTSTITVAIMP-EVEDVEVEIDMNDCKFDVFRASGNGGQCVNTT 247

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVR+THIPTG+VV CQ E+SQ KNK +A  +LR++LYELE QK           K++I
Sbjct: 248 DSAVRLTHIPTGIVVSCQDEKSQLKNKDKALKVLRSRLYELEQQK--AHDEEAAKRKSQI 305

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       +++GDLD+ + +  A  +
Sbjct: 306 GTGDRSEKIRTYNY-PQGRVTDHRIKLTLHKLDSIMNGDLDELIDSLTAADQ 356


>gi|332306089|ref|YP_004433940.1| peptide chain release factor 1 [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332173418|gb|AEE22672.1| peptide chain release factor 1 [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 362

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 117/339 (34%), Positives = 184/339 (54%), Gaps = 9/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   +      P +  +  + + L +E   L+  +    + Q    D     E+
Sbjct: 9   LESLTERFEEVQALVSQPEIIADQDKYRALTKEYSQLEGVVKCFADYQSAQQDFESAQEM 68

Query: 76  ALEEDDCSILQETSDNLQR---IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E D         +       I+   +  Q   L     D ++ ++E+ AGAGG E+  
Sbjct: 69  MQESDPEMREMAQEEYKSSKLAIEQYEDELQILLLPKDPNDESNCFVEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE R++K E + +++G+  G K     I G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAEARRWKVEVVTMNEGDHGGYKEVIANIIGDGAYGILKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P V +S  IE++++D +IDT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVVVMPEVAESEAIEVNKADLKIDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+P+G+VV+CQ ERSQHKN+A+A  +L+++L +LE +KR+       + +  +  G   
Sbjct: 249 THVPSGIVVECQDERSQHKNRAKAMAVLQSRLNQLEEEKRQAE--ETSTRRNLVASGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +IR+Y   P   V D R N+      DV+ GDLD  ++
Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYRLDDVVAGDLDAVLE 344


>gi|315607246|ref|ZP_07882247.1| peptide chain release factor RF2 [Prevotella buccae ATCC 33574]
 gi|315251063|gb|EFU31051.1| peptide chain release factor RF2 [Prevotella buccae ATCC 33574]
          Length = 373

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 122/357 (34%), Positives = 206/357 (57%), Gaps = 12/357 (3%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
            +   L    D D           +T+ P  W++   A+  M++ + ++  +   KE++ 
Sbjct: 12  ERAEALHRYLDIDKKKVEFEEEQLRTQAPDFWEDPARAQEQMKKVKSIEKWLDGYKEVRQ 71

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              +  +  +     DD    +E   +  +    +E  + +++L  + D  +A +++++G
Sbjct: 72  YADELQLAFDFF--HDDMVSEEEVDADYAKAIKAIEALELKNMLRQKEDPMEAVIKINSG 129

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWLKG 183
           AGGTESQDWA+ML+RMY RW E   ++     + +G+EAGIKS T+ ++ G  AYG+LK 
Sbjct: 130 AGGTESQDWASMLMRMYMRWCEAHGYRCTVSNLQEGDEAGIKSVTMEVEGGEYAYGYLKS 189

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SP+++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+ GAGGQ+V
Sbjct: 190 ENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDTIEVFVDPARLSWDTFRSGGAGGQNV 249

Query: 244 NTTDSAVRITH--------IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           N  +S VR+ +            ++++  + R Q KN+A+A  +L+++LY+  ++KR E 
Sbjct: 250 NKVESGVRLRYWYQDPDTGEEEEILIENTETRDQPKNRAKAMLLLKSQLYDRAMKKRLEA 309

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E+ K +I WG QIRSYV    + VKD RTN +      V+DG +D+F+KA L 
Sbjct: 310 QAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTADVDGVMDGKIDEFIKAYLM 365


>gi|153009595|ref|YP_001370810.1| peptide chain release factor 2 [Ochrobactrum anthropi ATCC 49188]
 gi|151561483|gb|ABS14981.1| peptide chain release factor 2 [Ochrobactrum anthropi ATCC 49188]
          Length = 321

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 202/309 (65%), Positives = 259/309 (83%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ L+++I+ I  ++  L D++ L+ +  EEDD SI+Q+  + ++ +K E++ +Q +
Sbjct: 1   MRERQQLEDSINGINHLKQTLNDSIELIAMGEEEDDKSIIQDAENTIRELKQEIDRRQID 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGEAD+ND Y+EVHAGAGGTESQDWA+MLLRMYTRWAE+   K E +E+H+GEEAGI
Sbjct: 61  MLLSGEADANDTYVEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+KG N+YG +K E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+I+++++E
Sbjct: 121 KSATILVKGHNSYGMMKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIDVQVTE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY
Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KRE   +   ++KTEIGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG +  
Sbjct: 241 EEELKKREAATDAANATKTEIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGSVTP 300

Query: 346 FMKATLAIK 354
           FM+A LA +
Sbjct: 301 FMEAALAHR 309


>gi|296159488|ref|ZP_06842312.1| peptide chain release factor 1 [Burkholderia sp. Ch1-1]
 gi|295890196|gb|EFG69990.1| peptide chain release factor 1 [Burkholderia sp. Ch1-1]
          Length = 356

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 180/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN       +  N+ + + L RE   L   +      +  + D     EL
Sbjct: 5   LDQLTTRLAELNDLLSREDITSNLDQYRKLTREHAELGPVVEHYALWRQAMNDAATAQEL 64

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +       +E      +R+       Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 65  LADASMRDFAEEEIRAARERMDKLGAELQKMLLPKDPNDDRNIFLEIRAGTGGDESALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE+ +++ E +   + +  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 125 GDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESGGHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 185 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQHKNK +A  +L A++ +   Q  E+ A    + K+ IG G    +
Sbjct: 245 LPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QSHEQQAKEAATRKSLIGSGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++DGDLD+ + A ++  +
Sbjct: 303 IRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELIAALVSEHQ 345


>gi|288574777|ref|ZP_06393134.1| peptide chain release factor 1 [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570518|gb|EFC92075.1| peptide chain release factor 1 [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 358

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 112/346 (32%), Positives = 175/346 (50%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72
                     +  K  DP +  N  E + L ++   L   +   +E    +  L +   L
Sbjct: 7   LQEIAATHEEIEHKMADPSVTSNPKELQSLGKKHAELSEIVEAYEEYKRIRSELEEAKAL 66

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L+    E      +E       ++ + +      L     D     +E+ AG GG E+  
Sbjct: 67  LDSDDPEMAQLAKEEVHSLEPLLEEQEKKVTLLLLPKDPNDDKSVMVEIRAGTGGDEAAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A+ L RMY+R+AE+R++  E L+ ++ E  G K     + G  AY  LK E GVHR+ R
Sbjct: 127 FASDLFRMYSRFAEQRRWSVEILDANETEIGGYKEIVFKVDGQGAYSDLKYESGVHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P  ++     + + D +IDTYR+SGAGGQHVN TDSAVRI
Sbjct: 187 VPATESGGRIHTSAATVAVLPEAEEFDVE-VRQEDLKIDTYRSSGAGGQHVNMTDSAVRI 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV CQ ERSQ KN+A+A   LR KLY++E +KR++     +  K +IG G   
Sbjct: 246 THLPTGIVVTCQDERSQIKNRARAMAFLRTKLYDMEQRKRQD--AEAQERKGQIGSGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R  +        + G + + ++A    ++
Sbjct: 304 ERIRTYNF-PQNRITDHRIGLTLYKLDAAMGGSITELVEALRMAEQ 348


>gi|313497099|gb|ADR58465.1| PrfA [Pseudomonas putida BIRD-1]
          Length = 360

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 121/346 (34%), Positives = 175/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   L     D  +  +    +   RE   ++   +  KE +    D      L
Sbjct: 9   LEILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWRKVQDDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE---VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +  +  +         Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LKDSDPDLREMAVEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AEKR ++ E L  ++GE  G K     ++G N YG LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYRASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ+ERSQHKN+A+A + L AKL +  +Q       I    K  +G G   
Sbjct: 249 THLPTGIVVECQEERSQHKNRARAMSWLSAKLND--MQTSAAQNAIASERKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+   S  D+L G +D  ++  LA  +
Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYSLDDILSGGVDAVIEPLLAEYQ 351


>gi|119477466|ref|ZP_01617657.1| peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2143]
 gi|119449392|gb|EAW30631.1| peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2143]
          Length = 361

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 113/341 (33%), Positives = 174/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            DN V R   L     D  +  +  + + L +E   ++  +   +     L D      L
Sbjct: 9   LDNLVDRHEELGALLSDGEVIGDQNKYRALSKEYAEVEPVVKCYENYCQTLDDIEEAKSL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL---LSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +            +            DS++ +LE+ AG GG E+  
Sbjct: 69  LKDGDADMREMAQEELSGAQSQRDVMMEELQRLLLPRDPNDSHNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMYTR+AE + +K E +    G+  G K     + G + Y  LK E G HR+ R
Sbjct: 129 FSGDLFRMYTRYAENKGWKIEIISERSGDHGGYKELISRVSGQDVYAHLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ + P VD   E+EI++SD RIDT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRVHTSACTVAIMPEVDSVDEVEINKSDLRIDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIP+G+VV+CQ ERSQHKNKA+A ++L+++L      K+++     +  ++ +G G   
Sbjct: 249 THIPSGLVVECQDERSQHKNKARAMSLLQSRLLTGIQDKQQQEQ--SDERRSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            +IR+Y   P   V D R N+     ++V++G L D +   
Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLAEVMEGALGDVIDPL 346


>gi|150004050|ref|YP_001298794.1| peptide chain release factor RF-2 [Bacteroides vulgatus ATCC 8482]
 gi|254882894|ref|ZP_05255604.1| peptide chain release factor RF-2 [Bacteroides sp. 4_3_47FAA]
 gi|294778088|ref|ZP_06743522.1| peptide chain release factor 2-like protein [Bacteroides vulgatus
           PC510]
 gi|319639698|ref|ZP_07994431.1| peptide chain release factor RF-2 [Bacteroides sp. 3_1_40A]
 gi|149932474|gb|ABR39172.1| peptide chain release factor RF-2 [Bacteroides vulgatus ATCC 8482]
 gi|254835687|gb|EET15996.1| peptide chain release factor RF-2 [Bacteroides sp. 4_3_47FAA]
 gi|294448146|gb|EFG16712.1| peptide chain release factor 2-like protein [Bacteroides vulgatus
           PC510]
 gi|317388662|gb|EFV69508.1| peptide chain release factor RF-2 [Bacteroides sp. 3_1_40A]
          Length = 371

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 139/358 (38%), Positives = 208/358 (58%), Gaps = 11/358 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D +N + ++     +T+ P  W +  +A+  MR+ + L   I   +E+
Sbjct: 10  VKERTAALERYLDIENKLVQVEEEQLRTQAPGFWDDAKKAEAQMRKVKDLQKWIDGYREV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +     DD    +E     Q+    VE  + +++L  EAD  D  L+++
Sbjct: 70  KTMADELELAFDFCK--DDLVTEEEVDAAYQKAVTAVEALELKNMLRQEADQMDCVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+ML+RMY RWAE   +K     + DG+EAGIK+ T+ I+G  AYG+LK
Sbjct: 128 CGAGGTESQDWASMLMRMYMRWAETNGYKVSVANLQDGDEAGIKTVTMNIEGSFAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+ I  +    DT+R+ GAGGQ+
Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVTIEPARMSWDTFRSGGAGGQN 247

Query: 243 VNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  +S VR+ +            ++++  + R Q KNK  A   LR+ LY+ ELQ R E
Sbjct: 248 VNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNKENAMRQLRSILYDKELQHRME 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L 
Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYLM 364


>gi|281425018|ref|ZP_06255931.1| peptide chain release factor 2 [Prevotella oris F0302]
 gi|281400862|gb|EFB31693.1| peptide chain release factor 2 [Prevotella oris F0302]
          Length = 378

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 129/359 (35%), Positives = 206/359 (57%), Gaps = 12/359 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++ + + L      D           +T+ P  W +   A+  MR+ + ++  +      
Sbjct: 10  ITERTDALHRYLGIDQKKIEFEEEQLRTQAPDFWDDPKRAEAQMRKVKGIEKWLKGYNAC 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +     D+    +E   +  +    VE  + +++L  E DS DA L+++
Sbjct: 70  RQLTDELQLAFDFYK--DEMVSEEEVDADYAKAVKAVEDLELKNMLRQEEDSMDAVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PNAYGWL 181
           +GAGGTESQDWA ML+RMY RW+E   +  +  +I DG+EAGIKS T+ I+G   AYG+L
Sbjct: 128 SGAGGTESQDWAQMLMRMYQRWSESHGYTVKVTDIQDGDEAGIKSVTMTIEGGDYAYGYL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ
Sbjct: 188 KSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVYVDPAKVSWDTFRSSGAGGQ 247

Query: 242 HVNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  +S VR+ +            ++++  + R Q KN+A+A  +L+++LY+  L+KR+
Sbjct: 248 NVNKVESGVRLRYQYEDPDTGEHEEILIENTETRDQPKNRAKAMLLLKSQLYDRALKKRQ 307

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                 E+ K +I WG QIRSYV    + VKD RT  + +    V+DG LD F+KA L 
Sbjct: 308 AEQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTGFQTSDVDAVMDGKLDGFIKAYLM 365


>gi|160891387|ref|ZP_02072390.1| hypothetical protein BACUNI_03837 [Bacteroides uniformis ATCC 8492]
 gi|270295480|ref|ZP_06201681.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|317478476|ref|ZP_07937636.1| peptide chain release factor 2 [Bacteroides sp. 4_1_36]
 gi|156858794|gb|EDO52225.1| hypothetical protein BACUNI_03837 [Bacteroides uniformis ATCC 8492]
 gi|270274727|gb|EFA20588.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|316905365|gb|EFV27159.1| peptide chain release factor 2 [Bacteroides sp. 4_1_36]
          Length = 371

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 132/358 (36%), Positives = 205/358 (57%), Gaps = 11/358 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D +    ++     +T+ P  W +   A+  M++ + L   IS   E+
Sbjct: 10  IKERTEALNRYLDIEGKKIQVEEEQLRTQAPGFWDDQKAAEAQMKKVKGLQQWISGYNEV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +     D+    +E  D   +    VE  + +++L  EAD  D  L+++
Sbjct: 70  KTLTDEVQLAFDFYK--DELVTEEEVDDAYAKAITAVEALELKNMLREEADQMDCVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA+ML+RMY R+AE   +K     + +G+EAGIK+ T+ I G  AYG+LK
Sbjct: 128 SGAGGTESQDWASMLMRMYLRYAETHGYKATIANLQEGDEAGIKTCTIEISGDYAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+ I  +    DT+R+ GAGGQ+
Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVNIEPARMSWDTFRSGGAGGQN 247

Query: 243 VNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  +S VR+ +            ++++  + R Q KN+  A  +LR+ LY+ ELQ R  
Sbjct: 248 VNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNRENALRLLRSMLYDKELQHRMA 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L 
Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYLM 364


>gi|302390589|ref|YP_003826410.1| bacterial peptide chain release factor 1 (bRF-1)
           [Thermosediminibacter oceani DSM 16646]
 gi|302201217|gb|ADL08787.1| bacterial peptide chain release factor 1 (bRF-1)
           [Thermosediminibacter oceani DSM 16646]
          Length = 364

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 123/352 (34%), Positives = 190/352 (53%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  D   +R   L  +  +P +     E + L +E   L+  +S  +E +  + +   
Sbjct: 1   MLDKLDAIEERYEELTREISEPAVIARQEEWRKLAKEHASLEEIVSCYREYKKVVSEIKE 60

Query: 72  LLELALEEDDCSILQETSDN-----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
             EL  E  +   ++E          +R K   E  +   L     D  D  +E+ AGAG
Sbjct: 61  SRELLKETSNDREMEEFIKEELENLQKREKELQERLKILLLPKDPNDEKDVIMEIRAGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMYTR+AE++ +K E +     E  G K     + G  AY  LK E G
Sbjct: 121 GEEAALFAGDLFRMYTRYAERQGWKVELMSSSPTELGGFKEVIFEVMGRGAYSRLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ RI   ++  R HTS +++ V P   + +++EI+ ++ RID +R+SG GGQ VNTT
Sbjct: 181 VHRVQRIPVTEAGGRIHTSTATVAVLP-EAEEVDVEINPNELRIDVFRSSGHGGQSVNTT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTG+VV CQ ERSQ KN+ +A  +LRAKL  LE+++RE+   I +S ++++
Sbjct: 240 DSAVRITHLPTGIVVTCQDERSQLKNRDKAMKILRAKL--LEMKQREQNEKIAQSRRSQV 297

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R         ++LDG+LD+ ++  +A  +
Sbjct: 298 GTGDRSERIRTYNF-PQGRVTDHRIGFTTHQLENILDGELDELIERLIAEDQ 348


>gi|307731136|ref|YP_003908360.1| peptide chain release factor 1 [Burkholderia sp. CCGE1003]
 gi|307585671|gb|ADN59069.1| peptide chain release factor 1 [Burkholderia sp. CCGE1003]
          Length = 360

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 180/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN       +  N  + + L RE   L   +      +  + D     EL
Sbjct: 9   LDQLTTRLAELNDLLSREDITSNRDQYRKLTREHAELGPVVEQYALWRQAMHDAATAQEL 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +       +E      +R++      Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 69  LADASMREFAEEEIRAARERMEQLGGKLQTMLLPKDPNDDRNIFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE+ +++ E +   + +  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQHKNK +A  +L A++ +   Q  E+ A    + K+ IG G    +
Sbjct: 249 LPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QSHEQQAKEAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++DGDLD+ + A ++  +
Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELIGALVSEHQ 349


>gi|212692934|ref|ZP_03301062.1| hypothetical protein BACDOR_02434 [Bacteroides dorei DSM 17855]
 gi|237708323|ref|ZP_04538804.1| peptide chain release factor RF-2 [Bacteroides sp. 9_1_42FAA]
 gi|237723533|ref|ZP_04554014.1| peptide chain release factor RF-2 [Bacteroides sp. D4]
 gi|265757045|ref|ZP_06090907.1| peptide chain release factor RF-2 [Bacteroides sp. 3_1_33FAA]
 gi|212664519|gb|EEB25091.1| hypothetical protein BACDOR_02434 [Bacteroides dorei DSM 17855]
 gi|229438084|gb|EEO48161.1| peptide chain release factor RF-2 [Bacteroides dorei 5_1_36/D4]
 gi|229457544|gb|EEO63265.1| peptide chain release factor RF-2 [Bacteroides sp. 9_1_42FAA]
 gi|263233544|gb|EEZ19173.1| peptide chain release factor RF-2 [Bacteroides sp. 3_1_33FAA]
          Length = 371

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 138/358 (38%), Positives = 208/358 (58%), Gaps = 11/358 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D +N + ++     +T+ P  W +  +A+  MR+ + L   I   +E+
Sbjct: 10  VKERTAALERYLDIENKLVQVEEEQLRTQAPGFWDDAKKAEAQMRKVKDLQKWIDGYREV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +     DD    +E     Q+    VE  + +++L  EAD  D  L+++
Sbjct: 70  KTMADELELAFDFCK--DDLVTEEEVDAAYQKAVTAVEALELKNMLRQEADQMDCVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+ML+RMY RWAE   +K     + DG+EAGIK+ T+ I+G  +YG+LK
Sbjct: 128 CGAGGTESQDWASMLMRMYMRWAETNGYKVSVANLQDGDEAGIKTVTMNIEGSFSYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+ I  +    DT+R+ GAGGQ+
Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVTIEPARMSWDTFRSGGAGGQN 247

Query: 243 VNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  +S VR+ +            ++++  + R Q KNK  A   LR+ LY+ ELQ R E
Sbjct: 248 VNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNKENAMRQLRSILYDKELQHRME 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L 
Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYLM 364


>gi|71736680|ref|YP_273268.1| peptide chain release factor 1 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257482007|ref|ZP_05636048.1| peptide chain release factor 1 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|289627918|ref|ZP_06460872.1| peptide chain release factor 1 [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
 gi|289647287|ref|ZP_06478630.1| peptide chain release factor 1 [Pseudomonas syringae pv. aesculi
           str. 2250]
 gi|298485681|ref|ZP_07003760.1| Peptide chain release factor 1 [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|119361578|sp|Q48MV4|RF1_PSE14 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71557233|gb|AAZ36444.1| peptide chain release factor 1 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|298159707|gb|EFI00749.1| Peptide chain release factor 1 [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|320325690|gb|EFW81751.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320327391|gb|EFW83405.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330868898|gb|EGH03607.1| peptide chain release factor 1 [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|330881882|gb|EGH16031.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330887864|gb|EGH20525.1| peptide chain release factor 1 [Pseudomonas syringae pv. mori str.
           301020]
 gi|330988605|gb|EGH86708.1| peptide chain release factor 1 [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 360

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 116/346 (33%), Positives = 175/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  ++  +++     D      L
Sbjct: 9   LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYQQLIRVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +  +  +         Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LKDSDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+P+G+VV+CQ+ERSQHKN+A+A + L AKL +   Q       I    K  +G G   
Sbjct: 249 THLPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAANAIASERKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+   S  +VL G +D  ++  LA  +
Sbjct: 307 ERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQ 351


>gi|269138757|ref|YP_003295458.1| peptide chain release factor 1 [Edwardsiella tarda EIB202]
 gi|267984418|gb|ACY84247.1| peptide chain release factor 1 [Edwardsiella tarda EIB202]
 gi|304558750|gb|ADM41414.1| Peptide chain release factor 1 [Edwardsiella tarda FL6-60]
          Length = 360

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 116/337 (34%), Positives = 180/337 (53%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +      + +    D      +
Sbjct: 9   LEALQERHEEVQALLGDAGVIADQDRFRALSREYAQLTDVSHCFLDWRQVQDDLATAEMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE     +    ++E   Q   L     D  D +LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQEEIKAARGRLADLEQHLQILLLPKDPDDERDCFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +GE  G K     + G  AYG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRIEIMSASEGEHGGYKEVIAKVSGDGAYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P V ++   +I+ +D RIDTYR+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPAVPEAELPQINPADLRIDTYRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++   +  + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEIAKRQQE--VASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +R+Y   P   V D R N+      +V++G LD+ ++
Sbjct: 307 VRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDNLIE 342


>gi|323527482|ref|YP_004229635.1| peptide chain release factor 1 [Burkholderia sp. CCGE1001]
 gi|323384484|gb|ADX56575.1| peptide chain release factor 1 [Burkholderia sp. CCGE1001]
          Length = 356

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 180/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN       +  N+ + + L RE   L   +      +  + D     EL
Sbjct: 5   LDQLTTRLAELNDLLSREDITSNLDQYRKLTREHAELGPVVEHYALWRQAMHDAATAQEL 64

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +       +E       R++      Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 65  LTDASMRDFAEEEIRAARDRMEQLGGELQTMLLPKDPNDDRNIFLEIRAGTGGDESALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE+ +++ E +   + +  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 125 GDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESGGHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 185 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQHKNK +A  +L A++ +   Q  E+ A    + K+ IG G    +
Sbjct: 245 LPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QSHEQQAKEAATRKSLIGSGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++DGDLD+ + A ++  +
Sbjct: 303 IRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELIGALVSEHQ 345


>gi|301100688|ref|XP_002899433.1| peptide chain release factor, putative [Phytophthora infestans
           T30-4]
 gi|262103741|gb|EEY61793.1| peptide chain release factor, putative [Phytophthora infestans
           T30-4]
          Length = 378

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 156/334 (46%), Positives = 216/334 (64%), Gaps = 3/334 (0%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q L+ L  +  DP LW +   A  +++    L++  + + E+  +  D   L  LA EE+
Sbjct: 32  QELAELRQEAADPKLWDDASNAASVVQRLAALESRETRVHELHRQFLDTKELYVLAKEEE 91

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D S+L +    +  ++ E +  + E LLS E D++  +LE+ AGAGGT+S DW  ML RM
Sbjct: 92  DESMLGDCVSAMTVVRAEAQQLRLEFLLSHETDAHSCFLEIQAGAGGTDSCDWTAMLARM 151

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y RW+E R F+ + ++   G+EAG +S  L + G  AYGW K E GVHRLVRISP+DS  
Sbjct: 152 YARWSEMRGFQVQYVDESVGDEAGFRSVVLKLDGVYAYGWAKNEAGVHRLVRISPFDSAG 211

Query: 201 RRHTSFSSIWVYPVV---DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           RRHTSF+ + VYP+      S EIE+S  D RIDT+R+SG GGQHVN+TDSA+RITH+ T
Sbjct: 212 RRHTSFAQVRVYPMAAEGRSSAEIEVSTKDLRIDTFRSSGPGGQHVNSTDSAIRITHLRT 271

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G+VVQ Q +RSQH+NKA+A  MLRAKLY+ +L++  +          +  WG QIRSYVL
Sbjct: 272 GIVVQSQSDRSQHRNKAEAMAMLRAKLYQRKLEEEAKARQKFAQGLGDNAWGNQIRSYVL 331

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            PYQ+VKD RTN  + + + VLDGD+D F++  L
Sbjct: 332 HPYQLVKDHRTNYSEGNIAQVLDGDIDRFIEKML 365


>gi|260767753|ref|ZP_05876688.1| peptide chain release factor 1 [Vibrio furnissii CIP 102972]
 gi|260617262|gb|EEX42446.1| peptide chain release factor 1 [Vibrio furnissii CIP 102972]
 gi|315179416|gb|ADT86330.1| peptide chain release factor 1 [Vibrio furnissii NCTC 11218]
          Length = 362

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 119/346 (34%), Positives = 182/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72
            ++ V+R   +     DP +  +  + + L +E   L+      +  Q    D      +
Sbjct: 9   LESLVERYEEVQHLLGDPAVIGDQDKFRALSKEYSQLEEITHCFQAYQQAQDDLSAAEEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +    E       E       I+   +  Q   L     D  + +LE+ AGAGG E+  
Sbjct: 69  AKEDDAEMREMAQDEIKVAKAEIERLSDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AEKR ++ E +  ++ E  G K     + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRFAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   V ++   EI  +D +IDT+R+SGAGGQHVNTTDSA+RI
Sbjct: 189 VPATESQGRVHTSACTVAVMAEVPEAEIPEIRTADLKIDTFRSSGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR   A I ++ +  +G G   
Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLAARIAKAEEEKR--AAAISDTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+     S+V++GDL   +   +   +
Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTVYRLSEVMEGDLQSLVDPVIQEHQ 351


>gi|148546007|ref|YP_001266109.1| peptide chain release factor 1 [Pseudomonas putida F1]
 gi|166223590|sp|A5VYG5|RF1_PSEP1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|148510065|gb|ABQ76925.1| bacterial peptide chain release factor 1 (bRF-1) [Pseudomonas
           putida F1]
          Length = 360

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 121/346 (34%), Positives = 175/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   L     D  +  +    +   RE   ++   +  KE +    D      L
Sbjct: 9   LEILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWRKVQDDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE---VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +  +  +         Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LKDSDPDLREMALEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AEKR ++ E L  ++GE  G K     ++G N YG LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYRASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ+ERSQHKN+A+A + L AKL +  +Q       I    K  +G G   
Sbjct: 249 THLPTGIVVECQEERSQHKNRARAMSWLSAKLND--MQTSAAQNAIASERKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+   S  D+L G +D  ++  LA  +
Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYSLDDILSGGVDAVIEPLLAEYQ 351


>gi|91785343|ref|YP_560549.1| peptide chain release factor 1 [Burkholderia xenovorans LB400]
 gi|119361518|sp|Q13TU2|RF1_BURXL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91689297|gb|ABE32497.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia
           xenovorans LB400]
          Length = 360

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 180/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN       +  N+ + + L RE   L   +      +  + D     EL
Sbjct: 9   LDQLTTRLAELNDLLSREDITSNLDQYRKLTREHAELGPVVEHYALWRQAMNDAATAQEL 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +       +E      +R+       Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 69  LADASMRDFAEEEIRAARERMDKLGAELQKMLLPKDPNDDRNIFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE+ +++ E +   + +  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQHKNK +A  +L A++ +   Q  E+ A    + K+ IG G    +
Sbjct: 249 LPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QSHEQQAKEAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++DGDLD+ + A ++  +
Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELIAALVSEHQ 349


>gi|295111719|emb|CBL28469.1| bacterial peptide chain release factor 1 (bRF-1) [Synergistetes
           bacterium SGP1]
          Length = 357

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 108/346 (31%), Positives = 168/346 (48%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +    +  +  DP    +    + L ++R  L+  +   +  +  +       +L
Sbjct: 7   LQAIEKEFLDIEERMGDPATASDPRALQDLGKKRAQLEPVVEKYRAYRAAVASIAEARDL 66

Query: 76  ALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
               D         +      +I+   +      L     D     +E+ AG GG E+  
Sbjct: 67  LKGGDPEIAELAREELSELEPQIENFEKELTILLLPKDPNDEKSVIVEIRAGVGGDEAAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMYTR+ E++++K E ++       G K     I    AY  +K E G HR+ R
Sbjct: 127 FAADLYRMYTRFCERQRWKIEVIDSSLIGLGGYKEVIFRIDSHGAYSMMKYESGGHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +++ R HTS +++ V P   + IEIEI   D ++DTYR+SGAGGQHVN TDSAVRI
Sbjct: 187 VPVTEASGRIHTSSATVAVMP-EVEDIEIEIRPEDLKVDTYRSSGAGGQHVNMTDSAVRI 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+V  CQ ERSQ KN+A+A   L+A+LY LE +K+          +  IG G   
Sbjct: 246 THLPTGIVATCQDERSQIKNRARAMAYLKARLYALEQEKQNAEQ--ASERRGMIGSGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N+      + LDGDL + + A +  ++
Sbjct: 304 ERIRTYNF-PQNRITDHRINLTLYKLDNYLDGDLFEMIDAMILAEQ 348


>gi|218783033|ref|YP_002434351.1| peptide chain release factor 1 [Desulfatibacillum alkenivorans
           AK-01]
 gi|226739100|sp|B8FEA2|RF1_DESAA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|218764417|gb|ACL06883.1| peptide chain release factor 1 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 355

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 114/345 (33%), Positives = 174/345 (50%), Gaps = 11/345 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  +   QR   + +   DP +  +    +  +RE   L   +   +E +  L     
Sbjct: 1   MLDRLEGVEQRFLEVESLLSDPKIVGDQKVYQKYVREHADLSKVVEAYREYKQVLEGLEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLE---VEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
             EL  + D         +  +  K +    +  +   L     D  +  LE+ AG GG 
Sbjct: 61  SKELLKDPDPDIKDLAKEEIDRLDKEQVRLEDELKILLLPKDPNDDKNVILEIRAGTGGD 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AE R +K E L  H     GIK    +I G   Y   K E G H
Sbjct: 121 EAGLFAADLFRMYSRYAETRGWKVETLSEHLTGVGGIKEIAAMITGQGVYSAFKFESGTH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS  ++ V P   + ++I+I  S+ R+D YR+ GAGGQHVNTTDS
Sbjct: 181 RVQRVPVTEAQGRIHTSACTVAVLP-EAEEVDIQIDPSEIRVDVYRSQGAGGQHVNTTDS 239

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+TH+PTGVVV CQ E+SQHKNKA+A  +LRA+L +  +Q++   A+I    K+++G 
Sbjct: 240 AVRLTHLPTGVVVTCQDEKSQHKNKAKAMKVLRARLLDHAVQEQN--ASISAERKSQVGS 297

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G    +IR+Y   P   V D R  +       ++ G + + + A 
Sbjct: 298 GDRSERIRTYNY-PQGRVTDHRIGLTLYKLESIMAGQISEIVDAL 341


>gi|253681032|ref|ZP_04861835.1| peptide chain release factor 1 [Clostridium botulinum D str. 1873]
 gi|253562881|gb|EES92327.1| peptide chain release factor 1 [Clostridium botulinum D str. 1873]
          Length = 357

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 118/351 (33%), Positives = 195/351 (55%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  D    +   L+ K  DP +  N  E + L +E   L+  ++  +E ++   +   
Sbjct: 1   MLDKLDFTENKYEELSIKISDPSVMANQNEWRKLCKEHAELETIVTKYREYKNNKEELES 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             EL  EE+D  + +   + ++ ++  +   +       L     D  + ++E+ AGAGG
Sbjct: 61  NKELLSEENDRDMKEMIQEEIKTLEENIVRDEEELKILLLPKDPNDDKNVFIEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE+  +KTE +  ++ +  G K    +++G +AY  +K E GV
Sbjct: 121 DEAALFAANLFRMYTRYAERHGWKTELMSTNETDIGGFKEVVFMLRGDSAYSKMKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS +++ V P   D ++I+I  +D R+D +RASG GGQ VNTTD
Sbjct: 181 HRVQRVPDTESSGRIHTSTATVAVLP-EVDDVDIQIDPNDIRVDVFRASGHGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+VV CQ E+SQ KNK +A  +L+A+LYE    +R   A+I    K+++G
Sbjct: 240 SAVRMTHIPTGIVVSCQDEKSQLKNKEKALKVLKARLYEKAEAER--AASISADRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V + R  +        LDGD+++ + A +  ++
Sbjct: 298 TGDRSERIRTYNY-PQGRVTEHRIGVTLYKLEAFLDGDMEEIIDALITAEQ 347


>gi|46396627|sp|Q89AC4|RF2_BUCBP RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 366

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 156/350 (44%), Positives = 227/350 (64%), Gaps = 1/350 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  Q+N L    D+D    RL  +N + + P  W++    K + +E+  L + ++ I +I
Sbjct: 15  LVSQINKLKRRLDYDIKKNRLLEINMELKLPETWKHPSLIKKINKEKNQLISVVTQITKI 74

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + + + + +L L    +  SIL       + I+  +   +  S+  G+ D    Y+++ 
Sbjct: 75  DNDVQELIDILNLENSNNINSILDNVLYEFKNIEKSIHELEKCSMFLGKYDYLSCYVDIQ 134

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +G+GG E+QDWA+MLLRMY RWAE +KFK + +E   GE  GIKSAT+ + G  A+GW +
Sbjct: 135 SGSGGVEAQDWASMLLRMYVRWAESKKFKIDIIEQTYGEVVGIKSATIEVLGKYAFGWFR 194

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR SP++++ RRHTSFSS++VYP++DD+I ++I+  D +ID YRASGAGGQH
Sbjct: 195 TETGIHRLVRKSPFNAHHRRHTSFSSVYVYPILDDAINVDINTRDLKIDVYRASGAGGQH 254

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRI H+PTG+VVQCQ +RSQHKNK QA   L+AKLYE  + +++    I E++
Sbjct: 255 VNKTESAVRIRHLPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYEQLINEKKCQQKILENN 314

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           K  IGWG QIRSY L     +KDLRT +E  +   VLDG LD F++ +L 
Sbjct: 315 KLNIGWGHQIRSYTLD-NSRIKDLRTGVESKNIQSVLDGGLDLFVECSLR 363


>gi|26987469|ref|NP_742894.1| peptide chain release factor 1 [Pseudomonas putida KT2440]
 gi|32171521|sp|Q88PW5|RF1_PSEPK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|24982133|gb|AAN66358.1|AE016264_2 peptide chain release factor 1 [Pseudomonas putida KT2440]
          Length = 360

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 120/346 (34%), Positives = 175/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   L     D  +  +    +   RE   ++   +  KE +    D      L
Sbjct: 9   LEILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWRKVQDDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE---VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +  +  +         Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LKDSDPDLREMAVEEVREAKEQLLTLEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AEKR ++ E L  ++GE  G K     ++G N YG LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYRASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ+ERSQHKN+A+A + L AKL +  +Q       +    K  +G G   
Sbjct: 249 THLPTGIVVECQEERSQHKNRARAMSWLSAKLND--MQTSAAQNALASERKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+   S  D+L G +D  ++  LA  +
Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYSLDDILSGGVDAVIEPLLAEYQ 351


>gi|17987337|ref|NP_539971.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str. 16M]
 gi|62289859|ref|YP_221652.1| peptide chain release factor 2 [Brucella abortus bv. 1 str. 9-941]
 gi|82699784|ref|YP_414358.1| peptide chain release factor 2 [Brucella melitensis biovar Abortus
           2308]
 gi|189024100|ref|YP_001934868.1| peptide chain release factor 2 [Brucella abortus S19]
 gi|225627404|ref|ZP_03785441.1| peptide chain release factor 2 [Brucella ceti str. Cudo]
 gi|225852429|ref|YP_002732662.1| peptide chain release factor 2 [Brucella melitensis ATCC 23457]
 gi|237815350|ref|ZP_04594348.1| peptide chain release factor 2 [Brucella abortus str. 2308 A]
 gi|254689165|ref|ZP_05152419.1| peptide chain release factor 2 [Brucella abortus bv. 6 str. 870]
 gi|254693648|ref|ZP_05155476.1| peptide chain release factor 2 [Brucella abortus bv. 3 str. Tulya]
 gi|254697300|ref|ZP_05159128.1| peptide chain release factor 2 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254706874|ref|ZP_05168702.1| peptide chain release factor 2 [Brucella pinnipedialis M163/99/10]
 gi|254710017|ref|ZP_05171828.1| peptide chain release factor 2 [Brucella pinnipedialis B2/94]
 gi|254714019|ref|ZP_05175830.1| peptide chain release factor 2 [Brucella ceti M644/93/1]
 gi|254716923|ref|ZP_05178734.1| peptide chain release factor 2 [Brucella ceti M13/05/1]
 gi|254719019|ref|ZP_05180830.1| peptide chain release factor 2 [Brucella sp. 83/13]
 gi|254730198|ref|ZP_05188776.1| peptide chain release factor 2 [Brucella abortus bv. 4 str. 292]
 gi|256031512|ref|ZP_05445126.1| peptide chain release factor 2 [Brucella pinnipedialis M292/94/1]
 gi|256044588|ref|ZP_05447492.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256061021|ref|ZP_05451178.1| peptide chain release factor 2 [Brucella neotomae 5K33]
 gi|256113462|ref|ZP_05454303.1| peptide chain release factor 2 [Brucella melitensis bv. 3 str.
           Ether]
 gi|256159637|ref|ZP_05457399.1| peptide chain release factor 2 [Brucella ceti M490/95/1]
 gi|256254917|ref|ZP_05460453.1| peptide chain release factor 2 [Brucella ceti B1/94]
 gi|256257415|ref|ZP_05462951.1| peptide chain release factor 2 [Brucella abortus bv. 9 str. C68]
 gi|256264074|ref|ZP_05466606.1| peptide chain release factor 2 [Brucella melitensis bv. 2 str.
           63/9]
 gi|260168645|ref|ZP_05755456.1| peptide chain release factor 2 [Brucella sp. F5/99]
 gi|260545394|ref|ZP_05821135.1| peptide chain release factor 2 [Brucella abortus NCTC 8038]
 gi|260563940|ref|ZP_05834426.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str. 16M]
 gi|260754664|ref|ZP_05867012.1| peptide chain release factor 2 [Brucella abortus bv. 6 str. 870]
 gi|260757887|ref|ZP_05870235.1| peptide chain release factor 2 [Brucella abortus bv. 4 str. 292]
 gi|260761710|ref|ZP_05874053.1| peptide chain release factor 2 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260883690|ref|ZP_05895304.1| peptide chain release factor 2 [Brucella abortus bv. 9 str. C68]
 gi|261213915|ref|ZP_05928196.1| peptide chain release factor 2 [Brucella abortus bv. 3 str. Tulya]
 gi|261218729|ref|ZP_05933010.1| peptide chain release factor 2 [Brucella ceti M13/05/1]
 gi|261222099|ref|ZP_05936380.1| peptide chain release factor 2 [Brucella ceti B1/94]
 gi|261314339|ref|ZP_05953536.1| peptide chain release factor 2 [Brucella pinnipedialis M163/99/10]
 gi|261317565|ref|ZP_05956762.1| peptide chain release factor 2 [Brucella pinnipedialis B2/94]
 gi|261321773|ref|ZP_05960970.1| peptide chain release factor 2 [Brucella ceti M644/93/1]
 gi|261325021|ref|ZP_05964218.1| peptide chain release factor 2 [Brucella neotomae 5K33]
 gi|261758119|ref|ZP_06001828.1| peptide chain release factor 2 [Brucella sp. F5/99]
 gi|265984009|ref|ZP_06096744.1| peptide chain release factor 2 [Brucella sp. 83/13]
 gi|265988599|ref|ZP_06101156.1| peptide chain release factor 2 [Brucella pinnipedialis M292/94/1]
 gi|265991013|ref|ZP_06103570.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265994850|ref|ZP_06107407.1| peptide chain release factor 2 [Brucella melitensis bv. 3 str.
           Ether]
 gi|265998064|ref|ZP_06110621.1| peptide chain release factor 2 [Brucella ceti M490/95/1]
 gi|294852271|ref|ZP_06792944.1| peptide chain release factor 2 [Brucella sp. NVSL 07-0026]
 gi|297248263|ref|ZP_06931981.1| peptide chain release factor 2 [Brucella abortus bv. 5 str. B3196]
 gi|306840093|ref|ZP_07472879.1| peptide chain release factor 2 [Brucella sp. NF 2653]
 gi|17983020|gb|AAL52235.1| bacterial peptide chain release factor 2 (rf-2) [Brucella
           melitensis bv. 1 str. 16M]
 gi|62195991|gb|AAX74291.1| peptide release factor 2 [Brucella abortus bv. 1 str. 9-941]
 gi|82615885|emb|CAJ10889.1| Class I peptide chain release factor domain:Peptide chain release
           factor 2:PCRF domain [Brucella melitensis biovar Abortus
           2308]
 gi|189019672|gb|ACD72394.1| Peptide chain release factor 2 [Brucella abortus S19]
 gi|225617409|gb|EEH14454.1| peptide chain release factor 2 [Brucella ceti str. Cudo]
 gi|225640794|gb|ACO00708.1| peptide chain release factor 2 [Brucella melitensis ATCC 23457]
 gi|237790187|gb|EEP64397.1| peptide chain release factor 2 [Brucella abortus str. 2308 A]
 gi|260096801|gb|EEW80676.1| peptide chain release factor 2 [Brucella abortus NCTC 8038]
 gi|260153956|gb|EEW89048.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str. 16M]
 gi|260668205|gb|EEX55145.1| peptide chain release factor 2 [Brucella abortus bv. 4 str. 292]
 gi|260672142|gb|EEX58963.1| peptide chain release factor 2 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260674772|gb|EEX61593.1| peptide chain release factor 2 [Brucella abortus bv. 6 str. 870]
 gi|260873218|gb|EEX80287.1| peptide chain release factor 2 [Brucella abortus bv. 9 str. C68]
 gi|260915522|gb|EEX82383.1| peptide chain release factor 2 [Brucella abortus bv. 3 str. Tulya]
 gi|260920683|gb|EEX87336.1| peptide chain release factor 2 [Brucella ceti B1/94]
 gi|260923818|gb|EEX90386.1| peptide chain release factor 2 [Brucella ceti M13/05/1]
 gi|261294463|gb|EEX97959.1| peptide chain release factor 2 [Brucella ceti M644/93/1]
 gi|261296788|gb|EEY00285.1| peptide chain release factor 2 [Brucella pinnipedialis B2/94]
 gi|261301001|gb|EEY04498.1| peptide chain release factor 2 [Brucella neotomae 5K33]
 gi|261303365|gb|EEY06862.1| peptide chain release factor 2 [Brucella pinnipedialis M163/99/10]
 gi|261738103|gb|EEY26099.1| peptide chain release factor 2 [Brucella sp. F5/99]
 gi|262552532|gb|EEZ08522.1| peptide chain release factor 2 [Brucella ceti M490/95/1]
 gi|262765963|gb|EEZ11752.1| peptide chain release factor 2 [Brucella melitensis bv. 3 str.
           Ether]
 gi|263001797|gb|EEZ14372.1| peptide chain release factor 2 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263094278|gb|EEZ18139.1| peptide chain release factor 2 [Brucella melitensis bv. 2 str.
           63/9]
 gi|264660796|gb|EEZ31057.1| peptide chain release factor 2 [Brucella pinnipedialis M292/94/1]
 gi|264662601|gb|EEZ32862.1| peptide chain release factor 2 [Brucella sp. 83/13]
 gi|294820860|gb|EFG37859.1| peptide chain release factor 2 [Brucella sp. NVSL 07-0026]
 gi|297175432|gb|EFH34779.1| peptide chain release factor 2 [Brucella abortus bv. 5 str. B3196]
 gi|306404821|gb|EFM61114.1| peptide chain release factor 2 [Brucella sp. NF 2653]
 gi|326408941|gb|ADZ66006.1| Peptide chain release factor 2 [Brucella melitensis M28]
 gi|326538654|gb|ADZ86869.1| peptide chain release factor 2 [Brucella melitensis M5-90]
          Length = 321

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 203/309 (65%), Positives = 258/309 (83%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ L+++I+ I  ++  L D++ L+ +  EE D SI+++    ++ +K E++ +Q +
Sbjct: 1   MRERQQLEDSINGINHLKQTLNDSVELIAMGEEEGDKSIVEDAEKTIRDLKDEIDRRQID 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGEAD+ND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+   K E +E+H+GEEAGI
Sbjct: 61  MLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+KG N+YG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+IE++++E
Sbjct: 121 KSATILVKGHNSYGMLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY
Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE  +   ++KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG +  
Sbjct: 241 EEELKKREEATDAANATKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTP 300

Query: 346 FMKATLAIK 354
           FM+A LA +
Sbjct: 301 FMEAALAHR 309


>gi|317507095|ref|ZP_07964856.1| peptide chain release factor 2 protein [Segniliparus rugosus ATCC
           BAA-974]
 gi|316254589|gb|EFV13898.1| peptide chain release factor 2 protein [Segniliparus rugosus ATCC
           BAA-974]
          Length = 372

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 153/356 (42%), Positives = 216/356 (60%), Gaps = 4/356 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS  L+ +    D       ++ L ++  DP LW++    + +          +  +  +
Sbjct: 12  LSATLSTVESALDLSKLEAEIADLESQAADPSLWEDQDRGQEVTSGLARRQATLRAVTAL 71

Query: 63  QDRLCDNLILLELALEE---DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + RL D  +L ELA ++   +    L E     + ++ ++E  +  +LL+GE D  +A +
Sbjct: 72  RSRLDDLHVLYELAEDDSGAEGQEALAEADAERKALREDIETLEVRTLLNGEYDEREALV 131

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + +GAGG ++ DWA ML+RMY RWAE+ K   E  +I   EEAGIKSAT  +K   AYG
Sbjct: 132 TIRSGAGGIDAADWAQMLMRMYIRWAERHKHPVEIYDISYAEEAGIKSATFAVKSAYAYG 191

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L  EQG HRLVRISP+D+  RR TSF+ + V PVV  +  IEI ES+ R+D YR+SG G
Sbjct: 192 TLSVEQGTHRLVRISPFDNQGRRQTSFADVEVLPVVGTTDHIEIPESEVRVDVYRSSGPG 251

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVR+TH+PTGVVV CQ E+SQ +NK  A  +L+AKL E   Q+ +E  N  
Sbjct: 252 GQSVNTTDSAVRLTHLPTGVVVTCQNEKSQLQNKLSAMRVLQAKLLERRRQEEQEQLNAL 311

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +       WG Q+RSYVL PYQMVKDLRT  E  +P+ VLDGD+D F+++ +  ++
Sbjct: 312 KGDGGS-SWGTQMRSYVLAPYQMVKDLRTEYEVGNPTTVLDGDIDGFLESGIRWRR 366


>gi|225386765|ref|ZP_03756529.1| hypothetical protein CLOSTASPAR_00513 [Clostridium asparagiforme
           DSM 15981]
 gi|225047127|gb|EEG57373.1| hypothetical protein CLOSTASPAR_00513 [Clostridium asparagiforme
           DSM 15981]
          Length = 358

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 116/351 (33%), Positives = 190/351 (54%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D+ +     L     DP + Q+      LM+E+  L   +   K+ +    D   
Sbjct: 1   MFDKLDDILIHYEELMLMLGDPDVTQDTKRFTKLMKEQADLAPIVEAYKQYKQAKQDVED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   + L   K  +E  + E           D  +  LE+ AGAGG
Sbjct: 61  SLAMLEEESDEEMREMAKEELADAKKRIEDLEHELKILLLPKDPNDDKNIILEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYT +A+ +++K E + +++    G K    ++ G  AY  LK E GV
Sbjct: 121 DEAALFAAELYRMYTNYADSQRWKVEIISLNENGIGGFKEVVAMVTGKGAYSKLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + ++++I  +DCRID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVMP-EAEEVDVQIDMNDCRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+V+  Q E+SQ +NK +A+ +LR+KL+++EL+KR+  ++  E  +++IG
Sbjct: 240 SAVRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLFDIELEKRQ--SSEAEERRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++GD+ + +   +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLYKIDSIMNGDIQELLDNLIAADQ 347


>gi|189502408|ref|YP_001958125.1| hypothetical protein Aasi_1048 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497849|gb|ACE06396.1| hypothetical protein Aasi_1048 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 332

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 146/330 (44%), Positives = 211/330 (63%), Gaps = 2/330 (0%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           L     K+  P  W+N  +A++++R  +   + I     ++  L +  +        D  
Sbjct: 2   LQDQEAKSLAPDFWENTSQAEVILRNLKITKSWIDAFDHVESLLENLEVTQLFYEAGDVD 61

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
                     Q +   +E  +   +L  E D N A +E++ GAGGTESQDWA ML RMY 
Sbjct: 62  ETE--VEKAYQNLLTGLEALEVRKMLQNEEDENSAIIEINPGAGGTESQDWAEMLTRMYI 119

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
            W EK  +  + L    G+ AG+KSATL I G  AYG+LK E G+HRLVRISP+D+  +R
Sbjct: 120 MWGEKHNYTVKELAYQRGDVAGVKSATLEITGTFAYGYLKSEIGIHRLVRISPFDAAGKR 179

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTSF+SI+VYPVV+++I+I+I+ +D   DT+RA GAGGQ+VN  ++AVR+ H P+G++V+
Sbjct: 180 HTSFASIYVYPVVENNIQIDINPADITWDTFRAGGAGGQNVNKVETAVRLKHAPSGIIVE 239

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQM 322
           CQQERSQ +NK +A  +L++KLY+LEL KR       ESSK  I +G QIR+YVL PY++
Sbjct: 240 CQQERSQAQNKEKALRILKSKLYQLELDKRNAEKEKMESSKKRIDFGSQIRNYVLHPYKL 299

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           VKD RT++E +  S VL+G++D+F+KA L 
Sbjct: 300 VKDNRTDVETSDTSGVLNGNIDEFIKAYLM 329


>gi|299142161|ref|ZP_07035294.1| peptide chain release factor 2, programmed [Prevotella oris C735]
 gi|298576250|gb|EFI48123.1| peptide chain release factor 2, programmed [Prevotella oris C735]
          Length = 378

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 129/359 (35%), Positives = 206/359 (57%), Gaps = 12/359 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++ + + L      D           +T+ P  W +   A+  MR+ + ++  +      
Sbjct: 10  ITERTDALHRYLGIDQKKIEFEEEQLRTQAPDFWDDPKRAEAQMRKVKGIEKWLKGYDAC 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +     D+    +E   +  +    VE  + +++L  E DS DA L+++
Sbjct: 70  RQLTDELQLAFDFYK--DEMVSEEEVDADYAKAVKAVEDLELKNMLRQEEDSMDAVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PNAYGWL 181
           +GAGGTESQDWA ML+RMY RW+E   +  +  +I DG+EAGIKS T+ I+G   AYG+L
Sbjct: 128 SGAGGTESQDWAQMLMRMYQRWSESHGYTVKVTDIQDGDEAGIKSVTMTIEGGDYAYGYL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ
Sbjct: 188 KSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVYVDPAKVSWDTFRSSGAGGQ 247

Query: 242 HVNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  +S VR+ +            ++++  + R Q KN+A+A  +L+++LY+  L+KR+
Sbjct: 248 NVNKVESGVRLRYQYEDPDTGEHEEILIENTETRDQPKNRAKAMLLLKSQLYDRALKKRQ 307

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                 E+ K +I WG QIRSYV    + VKD RT  + +    V+DG LD F+KA L 
Sbjct: 308 AEQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTGFQTSDVDAVMDGKLDGFIKAYLM 365


>gi|296114415|ref|ZP_06833069.1| peptide chain release factor 2 [Gluconacetobacter hansenii ATCC
           23769]
 gi|295979176|gb|EFG85900.1| peptide chain release factor 2 [Gluconacetobacter hansenii ATCC
           23769]
          Length = 322

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 193/309 (62%), Positives = 247/309 (79%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRER  L N I  +++++  + D + L+ELA  E D  ++ E    L+ +  E + ++ E
Sbjct: 1   MRERTLLANQIEGVQKLEGDVRDTIELVELAEMEGDGDVVAEGVLALRALAEEAKRRETE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEAD ND YLEV+AGAGGTE+QDWA MLLRMYTRWAE+  +K   +E  +GE+AG+
Sbjct: 61  SLLSGEADGNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTLMESSEGEQAGL 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ + GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPV+DDSIEI+I+E
Sbjct: 121 KSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVIDDSIEIDINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D R+DT+RASGAGGQHVN T+SA+RITHIPTG+VV CQ +RSQH+N+A A  ML+A++Y
Sbjct: 181 ADLRVDTFRASGAGGQHVNKTESAIRITHIPTGIVVACQTDRSQHRNRATAMAMLKARMY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E ELQ+RE  A   E++KT+IGWG QIRSYVL PYQ+VKDLRTN+EKT+P  VLDGDLDD
Sbjct: 241 EQELQRREAAAAQTEAAKTDIGWGHQIRSYVLAPYQLVKDLRTNMEKTNPGAVLDGDLDD 300

Query: 346 FMKATLAIK 354
           FM A+LA +
Sbjct: 301 FMAASLAAQ 309


>gi|134093473|ref|YP_001098548.1| peptide chain release factor 1 [Herminiimonas arsenicoxydans]
          Length = 356

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 121/344 (35%), Positives = 178/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL+ LN          N+   + + RE   L   ++          D      +
Sbjct: 5   LDQLTERLAELNVLLMQEDATSNMDNYRKMTREHAELGPLVALYGNYTQADNDIKDAQGM 64

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D      +E +    R++      Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 65  LSDPDMKEFAQEEMAAAKTRMEQLELDLQKMLLPKDPNDERNIFLEIRAGTGGDESALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+ +++ E +     E  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 125 GDLLRMYTRFAERNRWQIEMVSESASEVGGYKEVIVRIVGNGAYSKLKFESGGHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  ++ I+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 185 ATETQGRIHTSACTVAVMPEADEVEDVNINPADLRIDTYRASGAGGQHINKTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ +RSQHKNKA A  +L A++ +++L  RE+ +    + K+ IG G    +
Sbjct: 245 IPTGIVVECQDDRSQHKNKASALKVLAARIKDVQL--REQQSQEAATRKSLIGSGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++DGDL +   A  A  +
Sbjct: 303 IRTYNF-PQGRMTDHRINLTLYKLDFIMDGDLTELTNALAAEHQ 345


>gi|254230550|ref|ZP_04923918.1| peptide chain release factor 1 [Vibrio sp. Ex25]
 gi|262394972|ref|YP_003286826.1| peptide chain release factor 1 [Vibrio sp. Ex25]
 gi|151936922|gb|EDN55812.1| peptide chain release factor 1 [Vibrio sp. Ex25]
 gi|262338566|gb|ACY52361.1| peptide chain release factor 1 [Vibrio sp. Ex25]
          Length = 362

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 116/346 (33%), Positives = 180/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72
            +  V+R   +     DP +  +  + + L RE   L+      +  Q    D      +
Sbjct: 9   LETLVERYEEVQHLLGDPDVIGDQDKFRALSREYSQLEEVTKCFQAYQQAQEDLVAAEEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
                EE      +E  +    I+   +  Q   L     D  + +LE+ AGAGG E+  
Sbjct: 69  ANEDDEEMREMAQEEIKEAKATIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AEKR ++ E +  ++ E  G K     + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RI
Sbjct: 189 VPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E ++R     + ++ +  +G G   
Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAE--VSDTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+     ++V++GDL   +   +   +
Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTIYRLNEVMEGDLQSLIDPVIQEHQ 351


>gi|193222210|emb|CAL60419.2| Peptide chain release factor 1 (RF-1) [Herminiimonas
           arsenicoxydans]
          Length = 361

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 121/344 (35%), Positives = 178/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL+ LN          N+   + + RE   L   ++          D      +
Sbjct: 10  LDQLTERLAELNVLLMQEDATSNMDNYRKMTREHAELGPLVALYGNYTQADNDIKDAQGM 69

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D      +E +    R++      Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 70  LSDPDMKEFAQEEMAAAKTRMEQLELDLQKMLLPKDPNDERNIFLEIRAGTGGDESALFA 129

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+ +++ E +     E  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 130 GDLLRMYTRFAERNRWQIEMVSESASEVGGYKEVIVRIVGNGAYSKLKFESGGHRVQRVP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  ++ I+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 190 ATETQGRIHTSACTVAVMPEADEVEDVNINPADLRIDTYRASGAGGQHINKTDSAVRITH 249

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ +RSQHKNKA A  +L A++ +++L  RE+ +    + K+ IG G    +
Sbjct: 250 IPTGIVVECQDDRSQHKNKASALKVLAARIKDVQL--REQQSQEAATRKSLIGSGDRSER 307

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++DGDL +   A  A  +
Sbjct: 308 IRTYNF-PQGRMTDHRINLTLYKLDFIMDGDLTELTNALAAEHQ 350


>gi|294142153|ref|YP_003558131.1| peptide chain release factor 1 [Shewanella violacea DSS12]
 gi|293328622|dbj|BAJ03353.1| peptide chain release factor 1 [Shewanella violacea DSS12]
          Length = 361

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 115/338 (34%), Positives = 182/338 (53%), Gaps = 9/338 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     DP +  +    + L +E   L++ ++  K  Q    D     E+
Sbjct: 9   LEGLLERNEEVLALLSDPGVISDQDRFRALSKEYSQLEDVVATFKAFQQATEDLDAAKEM 68

Query: 76  ALEEDDCSILQETSDNLQ---RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E D         +       I    +  Q   L     D N+A++E+ AGAGG E+  
Sbjct: 69  LSENDPEIKEMAQEEMKDAKSIIVKLEDELQILLLPKDPNDDNNAFVEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMYTR+ E  +++TE +  ++GE  G K   + + G   YG LK E G HR+ R
Sbjct: 129 FAGDLYRMYTRYFETNRWQTEIMNANEGEHGGFKEVIIKVSGEGVYGRLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   V ++  I+I+ +D ++DT+RASGAGGQHVN TDSA+R+
Sbjct: 189 VPETESQGRVHTSACTVAVLAEVPEAEAIKINPADLKVDTFRASGAGGQHVNKTDSAIRL 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIP+G+VV+CQ +RSQHKN+AQA ++L A++  +E +KR        + +  +G G   
Sbjct: 249 THIPSGIVVECQDQRSQHKNRAQAMSVLSARIQAVEDEKRRSAEET--TRRNLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            +IR+Y   P   V D R N+     +DV++G+LD  +
Sbjct: 307 ERIRTYNY-PQGRVSDHRINLTLYRLNDVMEGELDVLI 343


>gi|183598963|ref|ZP_02960456.1| hypothetical protein PROSTU_02407 [Providencia stuartii ATCC 25827]
 gi|188021179|gb|EDU59219.1| hypothetical protein PROSTU_02407 [Providencia stuartii ATCC 25827]
          Length = 360

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 115/340 (33%), Positives = 177/340 (52%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L +E   L +        +    D      +
Sbjct: 9   LEALQERYEEIQAHLADAGVIADQGRFRALSKEYAQLTDVAKCFTAWRTVQEDIETAEMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE       R +   +  Q   L     D  + +LE+ AGAGG E+  +A
Sbjct: 69  LDDPEMKEMAQEELKEAKARNEELEQQLQLLLLPKDPDDEYNCFLEIRAGAGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE  +++ E +   DGE  G K     I G + YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEANRWRVELMSTSDGEHGGFKEVIAKISGESVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P + ++   EI+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAILPELPEAELPEINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ ERSQHKNKA+A ++L A++ + E+ KR+  A      +  +G G    +
Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLGARIRQAEMDKRQ--AAEASERRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IR+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDALIQPII 345


>gi|168185914|ref|ZP_02620549.1| peptide chain release factor 1 [Clostridium botulinum C str.
           Eklund]
 gi|169296113|gb|EDS78246.1| peptide chain release factor 1 [Clostridium botulinum C str.
           Eklund]
          Length = 357

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 117/351 (33%), Positives = 193/351 (54%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  D    +   L+ K  DP +  N  E + L +E   L+  ++  +E +    +   
Sbjct: 1   MLDKLDFTENKYEELSIKISDPSVMANQNEWRKLCKEHSELETIVTKYREYKGNKEELEA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             E+  EE D  + +   + ++ ++  +   +       L     D  + ++E+ AGAGG
Sbjct: 61  NKEMLSEETDKDMKEMIQEEIKTLEENIVTDEEELKILLLPKDPNDDKNVFIEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE+  +KTE +  ++ +  G K    +++G +AY  +K E GV
Sbjct: 121 DEAALFAANLFRMYTRYAERHGWKTELMSANETDIGGFKEVVFMLRGDSAYSKMKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS +++ V P   D ++I+I  +D R+D +RASG GGQ VNTTD
Sbjct: 181 HRVQRVPDTESSGRIHTSTATVAVLP-EVDDVDIQIDPNDIRVDVFRASGHGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+VV CQ E+SQ KNK +A  +L+A+LYE    +R   A+I    K+++G
Sbjct: 240 SAVRMTHIPTGIVVSCQDEKSQLKNKEKAMKVLKARLYEKAEAER--SASISADRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V + R  +        LDGD+++ + A +  ++
Sbjct: 298 TGDRSERIRTYNY-PQGRVTEHRIGLTLYKLEAFLDGDMEEVIDALITAEQ 347


>gi|167745421|ref|ZP_02417548.1| hypothetical protein ANACAC_00112 [Anaerostipes caccae DSM 14662]
 gi|167655142|gb|EDR99271.1| hypothetical protein ANACAC_00112 [Anaerostipes caccae DSM 14662]
          Length = 357

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 123/351 (35%), Positives = 183/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ V+R+  +  +  DP +  +    + LM+E+  L   +   KE      +   
Sbjct: 1   MFDKLESLVERMDTVLQQLNDPDVAGDQNRFRDLMKEQSDLAPIVEKYKEYVQEKQNIEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            LEL  EE D  + +   + L   K  VE  +       +     D  +  +E+ AGAGG
Sbjct: 61  SLELLEEESDEEMKELAKEELSESKANVERLEEELKILLIPKDPNDDKNIIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE R++K E L  ++    G K    +I G  AY   K E GV
Sbjct: 121 DEAALFAADVARMYRSYAEGRRWKVETLSFNESGIGGFKELVFMISGQGAYSRFKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS  ++ + P V+D        +DC+ D +RASG GGQ VNTTD
Sbjct: 181 HRVQRIPATESGGRIHTSTITVAIMPEVEDVEVEV-DLNDCKFDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+VV CQ E+SQ KNK +A  +LR++LYELE QK        E  K+++G
Sbjct: 240 SAVRLTHLPTGIVVSCQDEKSQLKNKDKALKVLRSRLYELEQQK--AHDAEAEKRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       V++GDLD+ + +  A  +
Sbjct: 298 TGDRSEKIRTYNY-PQGRVTDHRIKLTLHKLDSVMNGDLDELIDSLTAADQ 347


>gi|257126615|ref|YP_003164729.1| peptide chain release factor 1 [Leptotrichia buccalis C-1013-b]
 gi|257050554|gb|ACV39738.1| peptide chain release factor 1 [Leptotrichia buccalis C-1013-b]
          Length = 360

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 125/351 (35%), Positives = 187/351 (53%), Gaps = 11/351 (3%)

Query: 13  LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL- 70
           +F   D+ V +   L     DP +  +  +     +    +D  +      ++R  +   
Sbjct: 1   MFQKLDDVVLKHKELTELLMDPEVVSDPKKIMEYNKALNSIDEVVQKYTYYKNRKEEMES 60

Query: 71  ---ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
               L      E    +L+E     + I    E  +   L     D  +  +E+ AGAGG
Sbjct: 61  LKEDLKTEKDAEMKEMMLEEIHSIEEEIPNLEEELKILLLPKDPNDDKNVIMEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RM+TR+AE+ ++KTE ++  +    G+K  T LIKG  AY  LK E GV
Sbjct: 121 DEAALFAADIFRMFTRYAERNRWKTEIIDKSEIGVGGLKEVTFLIKGHGAYSRLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS  ++ V P +DD  E+EI+ SD +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPATESSGRVHTSTITVAVLPEIDDVSEVEINPSDLKIDTYRSSGAGGQHVNTTD 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VV  Q  RSQ KN+  A  +L +KLYE+E +K+          ++++G
Sbjct: 241 SAVRITHLPTGLVVTSQDGRSQIKNREAAMKVLASKLYEMEYEKQRSAVE--SERRSQVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       VLDGDLD+ + A +A ++
Sbjct: 299 SGDRSEKIRTYNF-PQGRVTDHRIKLTLHRLEGVLDGDLDEMIDALIAYEQ 348


>gi|254520297|ref|ZP_05132353.1| peptide chain release factor 1 [Clostridium sp. 7_2_43FAA]
 gi|226914046|gb|EEH99247.1| peptide chain release factor 1 [Clostridium sp. 7_2_43FAA]
          Length = 361

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 125/344 (36%), Positives = 186/344 (54%), Gaps = 11/344 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              +   L+ K  DP +  N  E + L +E   L+  ++  KE +  + D     E+  E
Sbjct: 9   IENKYDELSVKISDPSIMANQNEWRKLCKEHADLEVIVTAYKEYRTVIDDLAANKEMLAE 68

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           E D  + +  S+ +  +       +       L     D  + ++E+  GAGG E+  +A
Sbjct: 69  ESDREMREMLSEEISDLTAREGELEKHIQILLLPKDPNDDKNVFVEIRGGAGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+AE +++  E +  ++ +  G K    +IKG  AY  LK E GVHR+ R+ 
Sbjct: 129 ANLFRMYTRYAETQRWSVELMSANETDIGGFKEVVFMIKGSGAYSKLKYESGVHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S+ R HTS +++ V P   D +EIEI+E D RID YR+SG GGQ VNTTDSAVRITH
Sbjct: 189 DTESSGRIHTSTATVAVLP-EVDDVEIEINEKDLRIDVYRSSGNGGQCVNTTDSAVRITH 247

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTGVVV CQ E+SQ KNK +A  +LR++LYE    +R   A I E  K+++G G    +
Sbjct: 248 IPTGVVVACQDEKSQLKNKEKAMKVLRSRLYEAAEAERN--AGIAEDRKSQVGSGDRSER 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R  +        L+GD+++ + A +   +
Sbjct: 306 IRTYNY-PQGRVTDHRIGLTLYKLESYLNGDIEEVINALITADQ 348


>gi|66044202|ref|YP_234043.1| peptide chain release factor 1 [Pseudomonas syringae pv. syringae
           B728a]
 gi|75503325|sp|Q4ZXW7|RF1_PSEU2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|63254909|gb|AAY36005.1| Peptide chain release factor 1 [Pseudomonas syringae pv. syringae
           B728a]
 gi|330972814|gb|EGH72880.1| peptide chain release factor 1 [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 360

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 116/346 (33%), Positives = 174/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  ++   ++     D      L
Sbjct: 9   LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYAQLLRVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +  +  +         Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LKDSDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+P+G+VV+CQ+ERSQHKN+A+A + L AKL +   Q       I    K  +G G   
Sbjct: 249 THLPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAANAIASERKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+   S  +VL G +D  ++  LA  +
Sbjct: 307 ERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQ 351


>gi|330873307|gb|EGH07456.1| peptide chain release factor 1 [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 360

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 116/346 (33%), Positives = 174/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  ++   ++     D      L
Sbjct: 9   LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYTQLARVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +  +  +         Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LKDSDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+P+G+VV+CQ+ERSQHKN+A+A + L AKL +   Q       I    K  +G G   
Sbjct: 249 THLPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAANAIASERKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+   S  +VL G +D  ++  LA  +
Sbjct: 307 ERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQ 351


>gi|307131078|ref|YP_003883094.1| peptide chain release factor RF-1 [Dickeya dadantii 3937]
 gi|306528607|gb|ADM98537.1| peptide chain release factor RF-1 [Dickeya dadantii 3937]
          Length = 361

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 115/337 (34%), Positives = 175/337 (51%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     +P +  ++   + L RE   L +     +  Q    D      +
Sbjct: 9   LEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQRWQQTQDDLATAELM 68

Query: 76  ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +       E        +   +  Q   L     D    +LE+ AG GG E+  +A
Sbjct: 69  LDDPEMRDLAQDELKTAKAASEELEQQLQVLLLPKDPDDERGCFLEIRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R++K E +   DGE  G K     + G  AYG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESRRWKVEIMSASDGEHGGYKEMIAKVAGDGAYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P V ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEVPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLAARIRAAEMQKRQQE--EASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           IR+Y   P   V D R N+      + ++G LD  ++
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLDMLIQ 342


>gi|224025165|ref|ZP_03643531.1| hypothetical protein BACCOPRO_01899 [Bacteroides coprophilus DSM
           18228]
 gi|224018401|gb|EEF76399.1| hypothetical protein BACCOPRO_01899 [Bacteroides coprophilus DSM
           18228]
          Length = 371

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 137/358 (38%), Positives = 207/358 (57%), Gaps = 11/358 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D DN   ++     +T+ P  W +  +A+  M++ + L N I    E+
Sbjct: 10  VKERTEALHRYLDIDNKKVQVEEEQLRTQAPGFWDDAKKAEAQMKKVKTLQNWIEGYNEV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +    L     +D+     E  D   +    +E  + +++L  EAD  D  L+++
Sbjct: 70  KTLADELE--LSFDFYKDELVTEAEVDDAYNKAMQAIEELELKNMLRSEADQMDCVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA+ML+RMY RWAE   +K     + +G+EAGIK+ T+ I+G  AYG+LK
Sbjct: 128 SGAGGTESQDWASMLMRMYMRWAESNGYKLSVANLQEGDEAGIKTVTMNIEGSYAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+ +  +    DT+R+ GAGGQ+
Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVTVEPARLSWDTFRSGGAGGQN 247

Query: 243 VNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  +S VR+ +            ++++  + R Q KNK  A   LR+ LY+ ELQ R E
Sbjct: 248 VNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNKENAMRQLRSILYDKELQHRME 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L 
Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGKIDGFIKAYLM 364


>gi|306843816|ref|ZP_07476414.1| peptide chain release factor 2 [Brucella sp. BO1]
 gi|306275894|gb|EFM57610.1| peptide chain release factor 2 [Brucella sp. BO1]
          Length = 321

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 204/309 (66%), Positives = 258/309 (83%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ L+++I+ I  ++  L DN+ L+ +  EE D SI+++    ++ +K E++ +Q +
Sbjct: 1   MRERQQLEDSINGINYLKQTLNDNVELIAMGEEEGDKSIVEDAEKTIRDLKDEIDRRQID 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGEAD+ND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+   K E +E+H+GEEAGI
Sbjct: 61  MLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+KG N+YG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+IE++++E
Sbjct: 121 KSATILVKGHNSYGMLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY
Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE  +   ++KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG +  
Sbjct: 241 EEELKKREEATDAANATKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTP 300

Query: 346 FMKATLAIK 354
           FM+A LA +
Sbjct: 301 FMEAALAHR 309


>gi|291527966|emb|CBK93552.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium
           rectale M104/1]
          Length = 358

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 114/351 (32%), Positives = 182/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ +     L     +P +  +    K LM+E+  L   +   K+ ++   +   
Sbjct: 1   MFDKLEDLIHHYEELMNLLSEPDVANDANRFKKLMKEQSDLAPIVETYKKYKECKQNIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   + L+  K +     +  +   L     D  +  +E+ AGAGG
Sbjct: 61  SLAILDEESDEEMRELAKEELKDSKEQVEELEKKLKILLLPKDPNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE R +K E L+  +    G+KS   ++KG  AY  LK E GV
Sbjct: 121 EEAALFAAEIYRMYVHYAENRGWKVETLDADETGIGGMKSVEFMVKGSGAYSILKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R  TS  S+ V P  +D       +    ID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESQGRIQTSTCSVAVMPEAEDVDVKIDDKDIR-IDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH P+G+V+  Q E+SQ +NK +A+ +LR KLY++ELQK+++     E  +++IG
Sbjct: 240 SAVRLTHYPSGIVIYSQTEKSQIQNKEKAFALLRTKLYDMELQKKQD--AEAEERRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R N+       +L+GD+ + + A +A  +
Sbjct: 298 TGDRAEKIRTYNF-PQGRVTDHRINLTLYKLDKILNGDIQEIIDACIAADQ 347


>gi|225568858|ref|ZP_03777883.1| hypothetical protein CLOHYLEM_04937 [Clostridium hylemonae DSM
           15053]
 gi|225162357|gb|EEG74976.1| hypothetical protein CLOHYLEM_04937 [Clostridium hylemonae DSM
           15053]
          Length = 312

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 155/308 (50%), Positives = 214/308 (69%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+E + L   +  I  + D   D  +L+E++ EE+D S ++E    +Q  + + E  +  
Sbjct: 1   MKELKDLQELVKTIHSLYDGYEDINLLIEMSYEENDASAVKEMEAEIQSFEEQFEALRIR 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGE D+ +A + +HAGAGGTES DWA ML RMY+R+AE++ +  E L+  DG+  GI
Sbjct: 61  TLLSGEYDACNAIVTIHAGAGGTESCDWAGMLYRMYSRFAERKGYSMEVLDYLDGDITGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T  +KG NAYG+LK E+GVHRLVRISP+++  +R TSF+S  V P ++D I+IEI++
Sbjct: 121 KTVTFEVKGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFASCDVVPDIEDEIDIEIAD 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            + +IDTYRASGAGGQHVN T SA+RITH+PTG+VVQCQ ERSQH NK +A  ML+ KL 
Sbjct: 181 EELKIDTYRASGAGGQHVNKTSSAIRITHLPTGIVVQCQNERSQHFNKEKAMQMLKVKLQ 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            L+ Q++ E  +       EIG+G QIRSYV+QPY MVKD RTN E ++ + VLDG +D 
Sbjct: 241 LLKEQEQAEKVSDIRGEVKEIGFGNQIRSYVMQPYTMVKDHRTNEECSNVTAVLDGGIDM 300

Query: 346 FMKATLAI 353
           F+ A L  
Sbjct: 301 FINAYLKY 308


>gi|288927134|ref|ZP_06421019.1| peptide chain release factor 2, programmed [Prevotella buccae D17]
 gi|288336096|gb|EFC74492.1| peptide chain release factor 2, programmed [Prevotella buccae D17]
          Length = 373

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 122/357 (34%), Positives = 206/357 (57%), Gaps = 12/357 (3%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
            +   L    D D           +T+ P  W++   A+  M++ + ++  +   KE++ 
Sbjct: 12  ERAEALHRYLDIDKKKVEFEEEQLRTQAPDFWEDPTRAQEQMKKVKSIEKWLDGYKEVRQ 71

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              +  +  +     DD    +E   +  +    +E  + +++L  + D  +A +++++G
Sbjct: 72  YADELQLAFDFF--HDDMVSEEEVDADYAKAIKAIEALELKNMLRQKEDPMEAVIKINSG 129

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWLKG 183
           AGGTESQDWA+ML+RMY RW E   ++     + +G+EAGIKS T+ ++ G  AYG+LK 
Sbjct: 130 AGGTESQDWASMLMRMYMRWCEAHGYRCTVSNLQEGDEAGIKSVTMEVEGGEYAYGYLKS 189

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SP+++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+ GAGGQ+V
Sbjct: 190 ENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDTIEVFVDPARLSWDTFRSGGAGGQNV 249

Query: 244 NTTDSAVRITH--------IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           N  +S VR+ +            ++++  + R Q KN+A+A  +L+++LY+  ++KR E 
Sbjct: 250 NKVESGVRLRYWYQDPDTGEEEEILIENTETRDQPKNRAKAMLLLKSQLYDRAMKKRLEA 309

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E+ K +I WG QIRSYV    + VKD RTN +      V+DG +D+F+KA L 
Sbjct: 310 QAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTADVDGVMDGKIDEFIKAYLM 365


>gi|315924395|ref|ZP_07920617.1| peptide chain release factor RF1 [Pseudoramibacter alactolyticus
           ATCC 23263]
 gi|315622274|gb|EFV02233.1| peptide chain release factor RF1 [Pseudoramibacter alactolyticus
           ATCC 23263]
          Length = 364

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 121/353 (34%), Positives = 194/353 (54%), Gaps = 13/353 (3%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLC 67
            + +  D   ++   LN +  DP +  +  + + LM+E  H++  I   K  +     + 
Sbjct: 8   KMLEKLDFLEEKYQKLNQEISDPAVIADQAKWQDLMKEHAHMEPIIQKYKAYREADQAIA 67

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKL--EVEYKQFESLLSGEADSNDAYLEVHAGA 125
           D+  +L     + +   + E     Q  +L    E  +   L     D  +  +E+ AGA
Sbjct: 68  DSKEMLADKSIDPEFKAMCEDELAEQTAQLATLEEELKILLLPKDPNDERNVIVEIRAGA 127

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  L RMY+R+AE++ +K E L  +  +  GIK     I+G  AY  LK E 
Sbjct: 128 GGDEAALFAGDLFRMYSRYAERQSWKIEILSSNILDLGGIKEINFAIQGQGAYSRLKYES 187

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS +++ V P   D +E++++ +D R+D YR+SG GGQ VNT
Sbjct: 188 GVHRVQRVPETESGGRIHTSTATVAVLP-EADDVEVDLNPNDIRVDVYRSSGNGGQCVNT 246

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+THIP+G+VV CQ E+SQ KNKA+A  +L+A+LY+LE+QK++  + I E  K++
Sbjct: 247 TDSAVRLTHIPSGLVVTCQDEKSQIKNKAKAMKVLKARLYDLEMQKQQ--SAISEERKSQ 304

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +G G    +IR+Y   P   + D R           LDG++D+ + A +   +
Sbjct: 305 VGTGDRSERIRTYNF-PQGRITDHRIGQTVHQLEAFLDGEIDEMINALITTDQ 356


>gi|312134918|ref|YP_004002256.1| peptide chain release factor 1 [Caldicellulosiruptor owensensis OL]
 gi|311774969|gb|ADQ04456.1| peptide chain release factor 1 [Caldicellulosiruptor owensensis OL]
          Length = 355

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 118/343 (34%), Positives = 176/343 (51%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                ++   L  K  DP +     E + LM+E  +L   +   +E +  L       EL
Sbjct: 5   LQVIEEKYLELEKKIADPDIISQTQEWQKLMKEHSNLQPIVEKFREYKRILNTIKEAEEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              + D    +   + L   K + E  +       L     D  +  +E+ AGAGG E+ 
Sbjct: 65  LDTDIDEDFEKLVKEELNWAKEQKEIVERDLKILLLPKDPNDEKNVIMEIRAGAGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE++ +K E +   + +  G K    +I G  AY  LK E GVHR+ 
Sbjct: 125 LFAAELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + IE+EI E D  IDT+RA GAGGQHVN T+SAVR
Sbjct: 185 RVPVTESGGRIHTSTATVAVLP-EVEDIEVEIREEDLEIDTFRAGGAGGQHVNKTESAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           I H PTG+VV CQ ERSQH N+ +A  +LRA+LY+     +++        ++++G G  
Sbjct: 244 IVHKPTGIVVTCQDERSQHANRDRAMKILRARLYDYYQSLQQKEIE--SQRRSQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R  +       VLDG+LD+ + A +
Sbjct: 302 SERIRTYNF-PQGRVTDHRIGLTLYKLEQVLDGELDEIIDALI 343


>gi|330899755|gb|EGH31174.1| peptide chain release factor 1 [Pseudomonas syringae pv. japonica
           str. M301072PT]
 gi|330941684|gb|EGH44459.1| peptide chain release factor 1 [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 360

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 116/346 (33%), Positives = 174/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  ++   ++     D      L
Sbjct: 9   LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVTLYAQLLRVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +  +  +         Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LKDSDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+P+G+VV+CQ+ERSQHKN+A+A + L AKL +   Q       I    K  +G G   
Sbjct: 249 THLPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAANAIASERKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+   S  +VL G +D  ++  LA  +
Sbjct: 307 ERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQ 351


>gi|164688895|ref|ZP_02212923.1| hypothetical protein CLOBAR_02543 [Clostridium bartlettii DSM
           16795]
 gi|164602099|gb|EDQ95564.1| hypothetical protein CLOBAR_02543 [Clostridium bartlettii DSM
           16795]
          Length = 354

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 124/347 (35%), Positives = 184/347 (53%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 +   L  K  D  +  +    +  M+E   L+  +   +E ++ + +     E+
Sbjct: 5   LQVLEDKYKELTEKISDIEVINDQKTWQKYMKEHADLEPIVMKYREYKEVVDNIKESKEI 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  + +     L  ++  VE  +       L     D  +  +E+  GAGG E+ 
Sbjct: 65  LEEESDEELRELAKMELSDLESRVEPIEDELKILLLPKDPNDEKNVIVEIRGGAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE+R++KTE L   D    G K  + +IKG  AY  LK E GVHR+ 
Sbjct: 125 LFAGDLFRMYSRYAERRRWKTELLSASDTGVGGYKEVSFMIKGKGAYSRLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + +EIEI+ +D RID +RASG GGQ VNTTDSAVR
Sbjct: 185 RIPSTESGGRIHTSTATVAVLP-EVEDVEIEINPNDLRIDVFRASGNGGQCVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG VV CQ E+SQ KNK +A  +L+A+LY+  L   E+  +I    ++++G G  
Sbjct: 244 ITHLPTGEVVSCQDEKSQLKNKEKAMKVLKARLYDKALA--EQHDDIAAERRSQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R N+        LDGDLD+ + A +   +
Sbjct: 302 SERIRTYNF-PQGRVSDHRINLTLYKLESFLDGDLDEMIDALITEDQ 347


>gi|207721782|ref|YP_002252220.1| peptide chain release factor 1 (rf-1) protein [Ralstonia
           solanacearum MolK2]
 gi|206586946|emb|CAQ17530.1| peptide chain release factor 1 (rf-1) protein [Ralstonia
           solanacearum MolK2]
          Length = 356

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 178/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R   +N          N+ + + L RE   L+  ++     +    D     EL
Sbjct: 5   LDQLAERTIEINALLAREDATANLDQYRKLTREHAELEPVVAQYAVWKQAENDVATAQEL 64

Query: 76  ALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  +  ++       R+       Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 65  LADPDMKAFAEDELRVARDRMTALEAELQRLLLPKDPNDHRNIFLEIRAGTGGDESALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+++++ E +     +  G K     + G  AY  LK E G HR+ R+ 
Sbjct: 125 GDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLKFESGGHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D   +I+I+ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 185 ATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDTFRASGAGGQHINKTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A+L +   Q+RE  A    + K+ IG G    +
Sbjct: 245 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKD--RQEREAQAKEASARKSLIGSGDRSDR 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       ++DGDLD+ +    A  +
Sbjct: 303 IRTYNF-PQGRVTDHRINLTLYKIDALMDGDLDELLGTLAAEHQ 345


>gi|302872094|ref|YP_003840730.1| peptide chain release factor 1 [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302574953|gb|ADL42744.1| peptide chain release factor 1 [Caldicellulosiruptor obsidiansis
           OB47]
          Length = 355

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 119/343 (34%), Positives = 177/343 (51%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                ++   L  K  DP +     E + LM+E  +L   +   +E +  L       EL
Sbjct: 5   LQVIEEKYLELEKKIADPEIISQTQEWQKLMKEHSNLQPIVEKFREYKKILNTIKEAEEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              + D    +   + L R K + E  +       L     D  +  +E+ AGAGG E+ 
Sbjct: 65  LDTDLDEDFEKLVKEELNRAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE++ +K E +   + +  G K    +I G  AY  LK E GVHR+ 
Sbjct: 125 LFAAELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +E+EI E D  IDT+RA GAGGQHVN T+SAVR
Sbjct: 185 RVPVTESGGRIHTSTATVAVLP-EVEDVEVEIREEDLEIDTFRAGGAGGQHVNKTESAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           I H PTG+VV CQ ERSQH N+ +A  +LRA+LY+     +++        ++++G G  
Sbjct: 244 IVHKPTGIVVTCQDERSQHANRDRAMKILRARLYDYYQSLQQKEIE--SQRRSQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R  +       VLDGDLD+ + A +
Sbjct: 302 SERIRTYNF-PQGRVTDHRIGLTLYKLEQVLDGDLDEIIDALI 343


>gi|291515566|emb|CBK64776.1| bacterial peptide chain release factor 2 (bRF-2) [Alistipes shahii
           WAL 8301]
          Length = 370

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 131/359 (36%), Positives = 209/359 (58%), Gaps = 11/359 (3%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ ++   L    D D     L     KT++P+ W N  +A+  +R+   +   +     
Sbjct: 9   EIEQRREALERCLDIDQKRIDLRNEEEKTQEPNFWDNPDKAREQLRKVAGIKAWVEDYDA 68

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+    D  ++ +     +     +E   +      ++E  +  ++L  + D   A L++
Sbjct: 69  IRKDAEDLQLMPDFVK--EGVVSEEEMDAHYAATLEKIEKLEMRNMLRRDEDKLGAILDI 126

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGTE+ DWA+ML+RMYTRW E   +K + L+   G+E G+KS TL  +G  AYG+L
Sbjct: 127 NAGAGGTEALDWASMLMRMYTRWGEAHGYKVKVLDFQAGDEVGVKSCTLEFEGEYAYGYL 186

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+VR+SP+++N++R T+F+S++V P VDD+IEI ++ +D   DT+R+SGAGGQ
Sbjct: 187 KSENGVHRMVRLSPFNANNKRQTTFASVFVSPAVDDTIEITVNAADIEWDTFRSSGAGGQ 246

Query: 242 HVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  ++AVR+ +             +++  + RSQ  N+  A  +LR+KLY+ EL KR 
Sbjct: 247 NVNKVETAVRLRYHAKDPDTGEAIEYLIENMETRSQLMNRENAMRILRSKLYQRELDKRM 306

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                 E+SK +I WG QIRSYV    + VKD RT ++ ++   V+DGDLD F+KA L 
Sbjct: 307 ATQQALEASKKKIEWGSQIRSYVFDD-RRVKDHRTGVQTSAVESVMDGDLDAFIKAYLM 364


>gi|158321600|ref|YP_001514107.1| peptide chain release factor 1 [Alkaliphilus oremlandii OhILAs]
 gi|166977358|sp|A8MJX9|RF1_ALKOO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|158141799|gb|ABW20111.1| peptide chain release factor 1 [Alkaliphilus oremlandii OhILAs]
          Length = 357

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 117/352 (33%), Positives = 185/352 (52%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---LCD 68
           + D      ++   L+ K  +P +  +  + K L++E   L+  +   +E +     L D
Sbjct: 1   MLDKLAFLEEKYEDLSEKISEPEIINDQPQWKKLVKEHSDLEEIVMKYREYKKTEQGLND 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAG 126
              +L     +++   + +        K+EV   + + L       D  D  +E+ AGAG
Sbjct: 61  AKEILRDKTADEEFREMAKMEIAELEEKIEVLEGELKILLLPKDPNDDKDVIVEIRAGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMYTR+AE   +K E +  +D    G K    +IKG  AY  LK E G
Sbjct: 121 GDEAGLFAADLFRMYTRYAENVGWKVEMMSANDTGIGGYKEVIFMIKGHGAYSRLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ RI   +S  R HTS  ++ V P   D ++ E+  +D R+D +R+SG GGQ VNTT
Sbjct: 181 VHRVQRIPSTESGGRIHTSTITVAVLP-EADDVDFELDMNDIRVDVFRSSGNGGQSVNTT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVR+THIPTG VV CQ E+SQ KNK +A  +LRA+L ++ +Q+++    I +  K+++
Sbjct: 240 DSAVRVTHIPTGTVVSCQDEKSQLKNKEKALKILRARLLDVLIQEQQAE--IAQDRKSQV 297

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   + D R N+        L+GD+ + + A +   +
Sbjct: 298 GTGDRSERIRTYNF-PQGRITDHRINVTLYRLDSFLNGDIQEMIDALITTDQ 348


>gi|86357282|ref|YP_469174.1| peptide chain release factor 2 [Rhizobium etli CFN 42]
 gi|86281384|gb|ABC90447.1| peptide chain release factor 2 protein [Rhizobium etli CFN 42]
          Length = 322

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 225/309 (72%), Positives = 268/309 (86%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD+ ++ +++++ +L DN+ L+EL  EE D  I++E  D L+ +K E   +Q E
Sbjct: 1   MRERQQLDDGVNGVRQLEQQLKDNVELVELGEEEGDEGIVKEAEDALKALKAEAARRQVE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LSGEADSND YLEVH+GAGGTESQDWANMLLRMYTRWAE+++FK E LE+HDGEEAGI
Sbjct: 61  AMLSGEADSNDTYLEVHSGAGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSSIWVYPVVDDSI I+I+E
Sbjct: 121 KSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSINIDINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SDCRIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VV CQQERSQHKN+A+AW MLRA++Y
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVACQQERSQHKNRAKAWEMLRARMY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE AN   +SKT+IGWG QIRSYVLQPYQ+VKDLRT +  T+P DVLDGDL++
Sbjct: 241 EAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVASTAPDDVLDGDLNE 300

Query: 346 FMKATLAIK 354
           FM+A LA +
Sbjct: 301 FMEAALAHR 309


>gi|134301001|ref|YP_001114497.1| peptide chain release factor 1 [Desulfotomaculum reducens MI-1]
 gi|134053701|gb|ABO51672.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfotomaculum
           reducens MI-1]
          Length = 356

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 107/347 (30%), Positives = 181/347 (52%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L ++  DP +  +  + + L++    L   +   ++ +    D     ++
Sbjct: 5   LQALEDRFEQLESQISDPEVMADRAKWQQLVKSHSDLAEVVDVFRQYKKAKEDLQENKQM 64

Query: 76  ALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             ++ +    +     ++    +I+ +    +   L     D  +  +E+  G GG E+ 
Sbjct: 65  LEDKLEPDFREMVELEIEELTSKIEEQENKLKILLLPKDPNDDKNVIMEIRGGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AEK+ ++TE ++ ++ +  G K  T +I+G  A+  LK E GVHR+ 
Sbjct: 125 LFAGDLFRMYSRYAEKKGWRTEIIDANETDLGGFKEVTFVIEGKGAFSTLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + ++I+I+ +D RID + ASG GGQ VNTT SAVR
Sbjct: 185 RVPATESGGRIHTSAATVAVLP-EAEEVDIDINANDIRIDLFCASGPGGQCVNTTQSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG VV CQ E+SQHKNK +A  +LRA+L +    +++    I  + K+ +G G  
Sbjct: 244 ITHIPTGTVVSCQDEKSQHKNKDKAMRVLRARLLDKAQDEQQ--KAIAGARKSMVGSGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R  +       VL GDLD+ + A +   +
Sbjct: 302 SERIRTYNF-PQNRITDHRIGLTLHRLEYVLQGDLDELIDALITTDQ 347


>gi|330975577|gb|EGH75643.1| peptide chain release factor 1 [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 360

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 116/346 (33%), Positives = 174/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  ++   ++     D      L
Sbjct: 9   LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVTLYAQLLRVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +  +  +         Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LKDSDPDMREMAVEEVRETRQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+P+G+VV+CQ+ERSQHKN+A+A + L AKL +   Q       I    K  +G G   
Sbjct: 249 THLPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAANAIASERKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+   S  +VL G +D  ++  LA  +
Sbjct: 307 ERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQ 351


>gi|320535245|ref|ZP_08035369.1| peptide chain release factor 2 [Treponema phagedenis F0421]
 gi|320147898|gb|EFW39390.1| peptide chain release factor 2 [Treponema phagedenis F0421]
          Length = 320

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 160/306 (52%), Positives = 212/306 (69%), Gaps = 1/306 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M E + L + +   +E+Q  + D   L +LA E +D  +  E     Q++    E     
Sbjct: 1   MSELKVLRSRVEPWRELQTDIEDLQALYDLAEEAEDEQMTDEIDSVYQKLSERFEKLNVL 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGE D+NDA+L +HAGAGGTE+ DWA ML RMY RWAE+  +KTE L++ + +  GI
Sbjct: 61  HLLSGEVDANDAFLTIHAGAGGTEACDWAQMLTRMYLRWAERNDYKTETLDMLEAD-GGI 119

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KS TL + G  A+G+LKGE G+HRLVRISP+DSN+RRHTSF+S++V+PV+DD+IE+EI  
Sbjct: 120 KSITLKVSGEYAFGFLKGENGIHRLVRISPFDSNARRHTSFTSVYVFPVLDDTIEVEIRP 179

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D R+DTYRA GAGGQHVN TDSAVR+TH+PTG+VV CQ ERSQ  N+A A  +L+A+LY
Sbjct: 180 EDLRVDTYRAGGAGGQHVNKTDSAVRLTHLPTGIVVACQNERSQISNRATAMAILKARLY 239

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E   +++E+      + K +I WG QIRSYV QPY MVKD RT  E  +   V+DGD+D 
Sbjct: 240 EYYREEKEKDNQKFAAEKKDISWGNQIRSYVFQPYTMVKDHRTKYETGNIQAVMDGDIDG 299

Query: 346 FMKATL 351
           FM+  L
Sbjct: 300 FMEEYL 305


>gi|262166266|ref|ZP_06034003.1| peptide chain release factor 1 [Vibrio mimicus VM223]
 gi|262025982|gb|EEY44650.1| peptide chain release factor 1 [Vibrio mimicus VM223]
          Length = 362

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 116/346 (33%), Positives = 181/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72
            ++ V+R   +     DP +  +  + + L +E   L+      +  Q    D      +
Sbjct: 9   LESLVERYEEVQHLLGDPAVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +    E       E       I+   +  Q   L     D  + +LE+ AGAGG E+  
Sbjct: 69  AQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AEK+ ++ E +   + E  G K     + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P V ++   EI  SD +IDT+R+SGAGGQHVNTTDSA+RI
Sbjct: 189 VPATEAQGRIHTSACTVAVMPEVPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E  KR     I ++ +  +G G   
Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAE--ISDTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+     ++V++GD+   ++  +   +
Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTVYRLTEVMEGDMQSLIEPVIHEHQ 351


>gi|49531479|emb|CAG69191.1| peptide chain release factor 1 [Acinetobacter sp. ADP1]
          Length = 376

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 116/339 (34%), Positives = 173/339 (51%), Gaps = 7/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    + L RE   L+  +    + +    D      +
Sbjct: 23  LDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLNEIVDVWSKYRQAEEDIETAESM 82

Query: 76  ALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + QE     +  I+          +     D+N AYLEV AG GG E+  ++
Sbjct: 83  LSDPDFKDMAQEEIKENRALIEQLEGDLNILMIPKDPNDANAAYLEVRAGTGGDEAAIFS 142

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+++AE R ++ E L  ++GE  G K     + G   YG LK E G HR+ R+ 
Sbjct: 143 GDLFRMYSKYAESRGWRIEVLSENEGEHGGYKEVICRVDGDGVYGRLKFESGAHRVQRVP 202

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P VD    +EI+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 203 ATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDTYRASGAGGQHINKTDSAVRITH 262

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTGVVV+CQ+ERSQHKNKA+A  +L ++L     ++  +     E  +  +G G    +
Sbjct: 263 VPTGVVVECQEERSQHKNKAKAMALLVSRLENA--KRAAQETATSEMRRDLVGSGDRSER 320

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   + D R N+       +++GDL + + + 
Sbjct: 321 IRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 358


>gi|168025410|ref|XP_001765227.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683546|gb|EDQ69955.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 406

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 126/356 (35%), Positives = 205/356 (57%), Gaps = 3/356 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L R++  +    D      RL+ L  +     LW +   A+  + +   +   +  +++
Sbjct: 41  ELVRRVGEVLASSDIAEKKARLADLELQASQDTLWDDPDAAQRTLSDLAEVKENLDLLQQ 100

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEADSNDAYL 119
            ++++ +  +++EL  E++          +     +   ++  +   LLSG  D   A +
Sbjct: 101 FENKVEEAQLIIELMGEKEGPDGGLVQEASEIVSWLSNALDKFELAKLLSGPYDRRGARV 160

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            + AGAGGT++QDWA MLLRMY+RWAEK+ +  + +E   GEEAGIKS T  + G  AYG
Sbjct: 161 TISAGAGGTDAQDWAEMLLRMYSRWAEKQGYTVKVMEKSPGEEAGIKSVTFEVDGRFAYG 220

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI-EIEISESDCRIDTYRASGA 238
           +L  E+G HRLVR SP+++   R TSF+ + V P+ ++   ++EI E++  + T RA G 
Sbjct: 221 YLASEKGTHRLVRQSPFNAKGLRQTSFAGVEVMPIFEEESLDVEIPETELEVTTTRAGGK 280

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ+VN  ++AVRI HIPTG+ V+C +ERSQ  NK +   +L+AKL  + L+++      
Sbjct: 281 GGQNVNKVETAVRIVHIPTGIAVRCTEERSQLANKIKGLRLLKAKLLVIALEQKASDLKE 340

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                 +  WG+QIR+YV  PY++VKD+RT  E +  + V+DG+L  F+ A L  K
Sbjct: 341 IRGDVVKAEWGQQIRNYVFHPYKLVKDVRTATETSDVAGVMDGELGSFITAFLRWK 396


>gi|207744458|ref|YP_002260850.1| peptide chain release factor 1 (rf-1) protein [Ralstonia
           solanacearum IPO1609]
 gi|206595864|emb|CAQ62791.1| peptide chain release factor 1 (rf-1) protein [Ralstonia
           solanacearum IPO1609]
          Length = 356

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 178/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R   +N          N+ + + L RE   L+  ++     +    D     EL
Sbjct: 5   LDQLAERTIEINALLAREDATANLDQYRKLTREHAELEPVVTQYAVWKQAENDVATAQEL 64

Query: 76  ALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  +  ++       R+       Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 65  LADPDMKAFAEDELRVARDRMTALEAELQRLLLPKDPNDHRNIFLEIRAGTGGDESALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+++++ E +     +  G K     + G  AY  LK E G HR+ R+ 
Sbjct: 125 GDLLRMYTRYAERQRWQVEIVSESASDLGGYKEVIARLVGEGAYSRLKFESGGHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D   +I+I+ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 185 ATEAQGRIHTSACTVAVMPEADALADIQINPADLRIDTFRASGAGGQHINKTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A+L +   Q+RE  A    + K+ IG G    +
Sbjct: 245 LPTGLVVECQDDRSQHRNKDRAMQVLAARLKD--RQEREAQAKEASARKSLIGSGDRSDR 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       ++DGDLD+ +    A  +
Sbjct: 303 IRTYNF-PQGRVTDHRINLTLYKIDALMDGDLDELLGTLAAEHQ 345


>gi|12321742|gb|AAG50902.1|AC069159_3 peptide chain release factor 2, putative [Arabidopsis thaliana]
          Length = 524

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 156/372 (41%), Positives = 218/372 (58%), Gaps = 29/372 (7%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +++ +  +     W   + RL  L+ +     LW +   A  + RE   L   +  +   
Sbjct: 119 IAQSIQVIKRRLQWKKLLVRLKVLSAELNKSDLWDDPTHAGKISREHGSLTGKMKGVMTF 178

Query: 63  QDRLCDNLILLELALEEDD----------------------------CSILQETSDNLQR 94
           +  L +++ +L+LA EE+D                                +ET   L  
Sbjct: 179 ERELLEHIDMLKLAKEENDSELESVGVLALISQTLGMFSFSVSVSLGMINPKETLKALID 238

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++   + K+ E+LLS + D    Y+EV AGAGGTES DWA M++ MY  WA++RKF    
Sbjct: 239 MRRVSKEKELEALLSADNDPCSCYIEVQAGAGGTESNDWAAMVMEMYKTWAQRRKFSVTV 298

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           ++   GE AGIK AT+ + G  AYG+ K E GVHRLVRISP+DS  RRHTSF+++ V P+
Sbjct: 299 VDEAPGEIAGIKRATIKVNGEYAYGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPI 358

Query: 215 -VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             D S  +EI++SD RI+ +R+ GAGGQH NTTDSAVRI HIPTG+   CQ ERSQH NK
Sbjct: 359 LGDGSTRVEINDSDLRIERFRSGGAGGQHANTTDSAVRIVHIPTGITATCQNERSQHSNK 418

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
           A A  +L+++L +LE+ ++  +      S TEI WG QIR+YVL PY+MVKDLRTN E +
Sbjct: 419 ASAMAVLQSRLDQLEMARQTAMNAQHTQSLTEISWGNQIRTYVLHPYRMVKDLRTNYEVS 478

Query: 334 SPSDVLDGDLDD 345
            P  VL+GDLD+
Sbjct: 479 DPDSVLEGDLDE 490


>gi|118443694|ref|YP_879014.1| peptide chain release factor 1 [Clostridium novyi NT]
 gi|166223551|sp|A0Q312|RF1_CLONN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118134150|gb|ABK61194.1| peptide chain release factor 1 [Clostridium novyi NT]
          Length = 357

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 117/351 (33%), Positives = 193/351 (54%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  +    +   L+ K  DP +  N  E + L +E   L+  ++  +E +    +   
Sbjct: 1   MLDKLEFTENKYEELSIKISDPSVMANQNEWRKLCKEHAELETIVTKYREYKTNKEELEA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIK----LEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             E+  EE D  + +   + ++ ++     + E  +   L     D  + ++E+ AGAGG
Sbjct: 61  NKEMLSEETDKDMKEMIQEEIKTLEESIVKDQEELKILLLPKDPNDDKNVFIEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE+  +KTE +  ++ +  G K    +++G  AY  +K E GV
Sbjct: 121 DEAALFAANLFRMYTRYAERHGWKTELMSANETDIGGFKEVVFMLRGDCAYSKMKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS +++ V P   D ++I+I  +D R+D +RASG GGQ VNTTD
Sbjct: 181 HRVQRVPDTESSGRIHTSTATVAVLP-EVDDVDIQIDPNDIRVDVFRASGHGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+VV CQ E+SQ KNK +A  +L+A+LYE    +R   A+I    K+++G
Sbjct: 240 SAVRMTHIPTGIVVSCQDEKSQLKNKEKAMKVLKARLYEKAEAER--SASISADRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V + R  +        LDGD+++ + A +  ++
Sbjct: 298 TGDRSERIRTYNY-PQGRVTEHRIGLTLYKLEAFLDGDMEEVIDALITAEQ 347


>gi|161618874|ref|YP_001592761.1| peptide chain release factor 2 [Brucella canis ATCC 23365]
 gi|254704223|ref|ZP_05166051.1| peptide chain release factor 2 [Brucella suis bv. 3 str. 686]
 gi|260566529|ref|ZP_05836999.1| peptide chain release factor 2 [Brucella suis bv. 4 str. 40]
 gi|261754891|ref|ZP_05998600.1| peptide chain release factor 2 [Brucella suis bv. 3 str. 686]
 gi|161335685|gb|ABX61990.1| peptide chain release factor 2 [Brucella canis ATCC 23365]
 gi|260156047|gb|EEW91127.1| peptide chain release factor 2 [Brucella suis bv. 4 str. 40]
 gi|261744644|gb|EEY32570.1| peptide chain release factor 2 [Brucella suis bv. 3 str. 686]
          Length = 321

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 203/309 (65%), Positives = 258/309 (83%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ L+++I+ I  ++  L D++ L+ +  EE D SI+++    ++ +K E++ +Q +
Sbjct: 1   MRERQQLEDSINGINHLKQMLNDSVELIAMGEEEGDKSIVEDAEKTIRDLKDEIDRRQID 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGEAD+ND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+   K E +E+H+GEEAGI
Sbjct: 61  MLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+KG N+YG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+IE++++E
Sbjct: 121 KSATILVKGHNSYGMLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY
Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE  +   ++KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG +  
Sbjct: 241 EEELKKREEATDAANATKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTP 300

Query: 346 FMKATLAIK 354
           FM+A LA +
Sbjct: 301 FMEAALAHR 309


>gi|28897517|ref|NP_797122.1| peptide chain release factor 1 [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153840439|ref|ZP_01993106.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ3810]
 gi|260364112|ref|ZP_05776832.1| peptide chain release factor 1 [Vibrio parahaemolyticus K5030]
 gi|260897557|ref|ZP_05906053.1| peptide chain release factor 1 [Vibrio parahaemolyticus Peru-466]
 gi|260903527|ref|ZP_05911922.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ4037]
 gi|31076863|sp|Q87RN4|RF1_VIBPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|28805729|dbj|BAC59006.1| peptide chain release factor 1 [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149745897|gb|EDM57027.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ3810]
 gi|308086350|gb|EFO36045.1| peptide chain release factor 1 [Vibrio parahaemolyticus Peru-466]
 gi|308110855|gb|EFO48395.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ4037]
 gi|308114221|gb|EFO51761.1| peptide chain release factor 1 [Vibrio parahaemolyticus K5030]
          Length = 362

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 115/339 (33%), Positives = 178/339 (52%), Gaps = 9/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  +  + + L +E   L+      +  Q    D     E+
Sbjct: 9   LETLVERYEEVQHLLGDPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQDDLAAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           A E+D+        +     +         Q   L     D  + +LE+ AGAGG E+  
Sbjct: 69  AKEDDEEMREMAQEEIKDAKEAIERLADELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AEKR ++ E +  ++ E  G K     + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RI
Sbjct: 189 VPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E ++R     + ++ +  +G G   
Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEQERRAAE--VSDTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +IR+Y   P   V D R N+     ++V++GDL   + 
Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTIYRLNEVMEGDLQSLID 344


>gi|258648792|ref|ZP_05736261.1| peptide chain release factor 2 [Prevotella tannerae ATCC 51259]
 gi|260851127|gb|EEX70996.1| peptide chain release factor 2 [Prevotella tannerae ATCC 51259]
          Length = 371

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 132/358 (36%), Positives = 208/358 (58%), Gaps = 11/358 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D D     L     +T+ P  W +   A+  M++ + ++  +    ++
Sbjct: 10  VQTRAEALHKYLDIDAKRVELEEEQLRTQAPDFWDDPKRAEEQMKKVKGIEKWVIDYNDV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + +     E     D+    +E   + Q+    +E  +  ++L GE DS DA L+++
Sbjct: 70  CLLVGELETAFEFYK--DELVTEEEVDADYQKAIDAIEALELRNMLRGEEDSMDAVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA+ML+RMY R+AE + +KT    + DG+EAGIK+ T+ I+G  AYG+LK
Sbjct: 128 SGAGGTESQDWASMLMRMYLRYAEAQGYKTRISNLQDGDEAGIKTVTIEIEGDYAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+ +  S    D +R+ GAGGQ+
Sbjct: 188 SENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDNIEVYVDPSKISWDLFRSGGAGGQN 247

Query: 243 VNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  ++ VR+ +  T         ++++  + R Q +N+  A  +LR++LY+  LQKR  
Sbjct: 248 VNKVETGVRLRYQYTDPDTGETEEILIENTESRKQLENRENAMRLLRSQLYDRALQKRRA 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG LD F+KA L 
Sbjct: 308 AQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKLDGFIKAYLM 364


>gi|312131222|ref|YP_003998562.1| bacterial peptide chain release factor 1 (brf-1) [Leadbetterella
           byssophila DSM 17132]
 gi|311907768|gb|ADQ18209.1| bacterial peptide chain release factor 1 (bRF-1) [Leadbetterella
           byssophila DSM 17132]
          Length = 358

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 188/346 (54%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72
            +  V+R   ++ +   P +  ++ + K + +E + L+  +      +     L +   +
Sbjct: 6   LEGIVERFDEVSQQITMPEVVSDMEKFKKISKEYRDLEKIVQEYNAYKLILAHLDEAKEI 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQ 131
           L    +E+   + +   D L   K E E +  E  +     DS D+ LE+ AG GG E+ 
Sbjct: 66  LATEKDEEMREMAKLELDELSPKKEEAEERLKELLIPKDPNDSKDSILEIRAGTGGDEAS 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A ++ ++   ++  D    G K   + +KG + YG LK E GVHR+ 
Sbjct: 126 IFAGDLFRMYQRFAAQQGWQFTVMDFTDAPSGGYKEIVVSVKGEDVYGKLKYESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   D ++++I+ +D R DT+ +SGAGGQ VNTT SAVR
Sbjct: 186 RVPATESQGRIHTSAATVAVLP-EADEVDVQINMNDIRKDTFCSSGAGGQSVNTTYSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +THIPTG+VVQCQ ERSQ KN  +A  +LR++LYE+EL K+ E  +I    K+ +G G +
Sbjct: 245 VTHIPTGLVVQCQDERSQIKNFDKALTVLRSRLYEIELAKQNE--SIAGERKSLVGSGDR 302

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              IR+Y   P   V D R      +   V++G++ +F++     +
Sbjct: 303 SDKIRTYNY-PQGRVTDHRIGFTVYNLPHVMEGNIGEFIEKLRLAE 347


>gi|15642178|ref|NP_231810.1| peptide chain release factor 1 [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|147674456|ref|YP_001217695.1| peptide chain release factor 1 [Vibrio cholerae O395]
 gi|153213234|ref|ZP_01948646.1| peptide chain release factor 1 [Vibrio cholerae 1587]
 gi|153801649|ref|ZP_01956235.1| peptide chain release factor 1 [Vibrio cholerae MZO-3]
 gi|153818801|ref|ZP_01971468.1| peptide chain release factor 1 [Vibrio cholerae NCTC 8457]
 gi|153823572|ref|ZP_01976239.1| peptide chain release factor 1 [Vibrio cholerae B33]
 gi|153825583|ref|ZP_01978250.1| peptide chain release factor 1 [Vibrio cholerae MZO-2]
 gi|153828626|ref|ZP_01981293.1| peptide chain release factor 1 [Vibrio cholerae 623-39]
 gi|227082304|ref|YP_002810855.1| peptide chain release factor 1 [Vibrio cholerae M66-2]
 gi|229507743|ref|ZP_04397248.1| peptide chain release factor 1 [Vibrio cholerae BX 330286]
 gi|229512021|ref|ZP_04401500.1| peptide chain release factor 1 [Vibrio cholerae B33]
 gi|229513825|ref|ZP_04403287.1| peptide chain release factor 1 [Vibrio cholerae TMA 21]
 gi|229519157|ref|ZP_04408600.1| peptide chain release factor 1 [Vibrio cholerae RC9]
 gi|229522130|ref|ZP_04411547.1| peptide chain release factor 1 [Vibrio cholerae TM 11079-80]
 gi|229524175|ref|ZP_04413580.1| peptide chain release factor 1 [Vibrio cholerae bv. albensis VL426]
 gi|229528814|ref|ZP_04418204.1| peptide chain release factor 1 [Vibrio cholerae 12129(1)]
 gi|229607288|ref|YP_002877936.1| peptide chain release factor 1 [Vibrio cholerae MJ-1236]
 gi|254291410|ref|ZP_04962203.1| peptide chain release factor 1 [Vibrio cholerae AM-19226]
 gi|254849258|ref|ZP_05238608.1| peptide chain release factor 1 [Vibrio cholerae MO10]
 gi|255745092|ref|ZP_05419041.1| peptide chain release factor 1 [Vibrio cholera CIRS 101]
 gi|262167528|ref|ZP_06035234.1| peptide chain release factor 1 [Vibrio cholerae RC27]
 gi|20139356|sp|Q9KQ25|RF1_VIBCH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|172047628|sp|A5F696|RF1_VIBC3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790906|sp|C3LPI4|RF1_VIBCM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|9656733|gb|AAF95324.1| peptide chain release factor 1 [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|124116034|gb|EAY34854.1| peptide chain release factor 1 [Vibrio cholerae 1587]
 gi|124122826|gb|EAY41569.1| peptide chain release factor 1 [Vibrio cholerae MZO-3]
 gi|126510644|gb|EAZ73238.1| peptide chain release factor 1 [Vibrio cholerae NCTC 8457]
 gi|126518907|gb|EAZ76130.1| peptide chain release factor 1 [Vibrio cholerae B33]
 gi|146316339|gb|ABQ20878.1| peptide chain release factor 1 [Vibrio cholerae O395]
 gi|148875897|gb|EDL74032.1| peptide chain release factor 1 [Vibrio cholerae 623-39]
 gi|149740734|gb|EDM54833.1| peptide chain release factor 1 [Vibrio cholerae MZO-2]
 gi|150422740|gb|EDN14694.1| peptide chain release factor 1 [Vibrio cholerae AM-19226]
 gi|227010192|gb|ACP06404.1| peptide chain release factor 1 [Vibrio cholerae M66-2]
 gi|227014075|gb|ACP10285.1| peptide chain release factor 1 [Vibrio cholerae O395]
 gi|229332588|gb|EEN98074.1| peptide chain release factor 1 [Vibrio cholerae 12129(1)]
 gi|229337756|gb|EEO02773.1| peptide chain release factor 1 [Vibrio cholerae bv. albensis VL426]
 gi|229341055|gb|EEO06060.1| peptide chain release factor 1 [Vibrio cholerae TM 11079-80]
 gi|229343846|gb|EEO08821.1| peptide chain release factor 1 [Vibrio cholerae RC9]
 gi|229349006|gb|EEO13963.1| peptide chain release factor 1 [Vibrio cholerae TMA 21]
 gi|229351986|gb|EEO16927.1| peptide chain release factor 1 [Vibrio cholerae B33]
 gi|229355248|gb|EEO20169.1| peptide chain release factor 1 [Vibrio cholerae BX 330286]
 gi|229369943|gb|ACQ60366.1| peptide chain release factor 1 [Vibrio cholerae MJ-1236]
 gi|254844963|gb|EET23377.1| peptide chain release factor 1 [Vibrio cholerae MO10]
 gi|255736922|gb|EET92318.1| peptide chain release factor 1 [Vibrio cholera CIRS 101]
 gi|262024100|gb|EEY42795.1| peptide chain release factor 1 [Vibrio cholerae RC27]
 gi|327484701|gb|AEA79108.1| Peptide chain release factor 1 [Vibrio cholerae LMA3894-4]
          Length = 362

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 180/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72
            ++ V+R   +     DP +  +  + + L +E   L+      +  Q    D      +
Sbjct: 9   LESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +    E       E       I+   +  Q   L     D  + +LE+ AGAGG E+  
Sbjct: 69  AQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AEK+ ++ E +   + E  G K     + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P + ++   EI  SD +IDT+R+SGAGGQHVNTTDSA+RI
Sbjct: 189 VPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E  KR     I ++ +  +G G   
Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAE--ISDTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+     ++V++GD+   +   +   +
Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTVYRLTEVMEGDMQSLIDPVIHEHQ 351


>gi|328473485|gb|EGF44333.1| peptide chain release factor 1 [Vibrio parahaemolyticus 10329]
          Length = 362

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 115/339 (33%), Positives = 178/339 (52%), Gaps = 9/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  +  + + L +E   L+      +  Q    D     E+
Sbjct: 9   LETLVERYEEVQHLLGDPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQDDLAAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           A E+D+        +     +         Q   L     D  + +LE+ AGAGG E+  
Sbjct: 69  AKEDDEEMREMAQEEIKDAKEAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AEKR ++ E +  ++ E  G K     + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RI
Sbjct: 189 VPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E ++R     + ++ +  +G G   
Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEQERRAAE--VSDTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +IR+Y   P   V D R N+     ++V++GDL   + 
Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTIYRLNEVMEGDLQSLID 344


>gi|34539945|ref|NP_904424.1| peptide chain release factor 1 [Porphyromonas gingivalis W83]
 gi|46576709|sp|Q7MXT5|RF1_PORGI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|34396256|gb|AAQ65323.1| peptide chain release factor 1 [Porphyromonas gingivalis W83]
          Length = 361

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 103/346 (29%), Positives = 175/346 (50%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   ++T   DP +  ++     L +E + L+   +  ++ ++ L +       
Sbjct: 10  LDGLESRFEEISTLITDPAVIADMKRFTKLSKEYRDLEKIHTAGRDYRNLLANIEEAKHT 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +E D  + +   + L      +   +       + +   D  +A +E+  G GG E+ 
Sbjct: 70  MAKESDEELREMAREMLAEANERLPILEEEIKMLLIPANPEDDKNAIVEIRGGTGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + ++ E  ++ +G   G K     +KG   YG LK E GVHR+ 
Sbjct: 130 LFAGDLYRMYVKYCESKGWQVEVTDLSEGATGGYKEIVFSVKGEGVYGILKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + +++EI+ +D  + T R+ GAGGQ+VN  ++ V+
Sbjct: 190 RVPATETQGRIHTSAATVAVLP-EAEEVDVEINPADIEMQTSRSGGAGGQNVNKVETKVQ 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +TH PTG+VV CQQ RSQ  N+  A  MLR+KLY++EL K  E   I    KT +  G +
Sbjct: 249 LTHKPTGMVVVCQQARSQIANRELAMQMLRSKLYDIELSKHNEA--IAARRKTMVSTGDR 306

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              IR+Y   P   V D R N+   + S V+DG++  F+ A +  +
Sbjct: 307 SAKIRTYNY-PQGRVTDHRINMTVYNLSAVMDGEVQPFIDALIIAE 351


>gi|149277162|ref|ZP_01883304.1| peptide chain release factor RF-2 [Pedobacter sp. BAL39]
 gi|149232039|gb|EDM37416.1| peptide chain release factor RF-2 [Pedobacter sp. BAL39]
          Length = 324

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 140/324 (43%), Positives = 208/324 (64%), Gaps = 2/324 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
            T  P  W +  +A+  +             + +  +L D  ++ +     D  +   + 
Sbjct: 1   MTLQPGFWDDPKKAEKHLAAINSKKVWTDAWQVVNAKLEDTEVMFDFLQAGDATAEEMQE 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
             +       +E  + +++LS + D   A +++ AGAGGTES DWA ML+RMY  W EK 
Sbjct: 61  QYDE--CLALIEALELKNMLSSKEDQLHAVMQITAGAGGTESCDWAAMLMRMYIMWGEKN 118

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +K    +  +GE AG+KS TL   G  +YG+LKGE GVHRLVRISP+DSN+RRHTSF+S
Sbjct: 119 GYKVTEQDYQEGEVAGVKSVTLQFAGDFSYGYLKGENGVHRLVRISPFDSNARRHTSFAS 178

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           ++VYP+VDD+IEIE+ +S+   +T+R+ GAGGQ+VN  ++AVR+ H P+G+V++ Q+ RS
Sbjct: 179 VYVYPLVDDTIEIEVKDSEIEFETFRSGGAGGQNVNKVETAVRLYHKPSGIVIKNQESRS 238

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q +NK  A  +L+++LYE E++KR E     E SK +I WG QIR+YVL PY++VKDLRT
Sbjct: 239 QLQNKENAMRLLKSQLYEAEMRKRMEATAAIEGSKKKIEWGSQIRNYVLHPYKLVKDLRT 298

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
           N E ++   VLDG+L++F+KA L 
Sbjct: 299 NYETSNAQGVLDGELNEFLKAYLM 322


>gi|90412790|ref|ZP_01220790.1| peptide chain release factor 1 [Photobacterium profundum 3TCK]
 gi|90326149|gb|EAS42576.1| peptide chain release factor 1 [Photobacterium profundum 3TCK]
          Length = 362

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 114/346 (32%), Positives = 183/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  +  + + L +E   L++     +       D     E+
Sbjct: 9   LETLVERYEEIQHLLGDPGILSDQNKFRALSKEYSQLEDITQCFQAYLGAKDDLEAAEEM 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           A E+D         +   +   I    +  Q   +     D  + ++E+ AGAGG E+  
Sbjct: 69  AKEDDPEMREMAQEEVKESKANILRLEDELQVLLIPKDPNDDRNCFVEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE+R ++ E +  +  E+ G K     + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAERRGWRIEVINENRSEQGGYKEMIAKVSGDGAYGILKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P + ++   EI+  D +IDT+R+SGAGGQHVNTTDSA+RI
Sbjct: 189 VPATESQGRVHTSACTVAVMPEIPEAEIPEINTGDLKIDTFRSSGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR        + +  +G G   
Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRHAE--EASTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +     ++V++GDLD  ++  +   +
Sbjct: 307 DRIRTYNY-PQGRVSDHRITLTLYRLNEVMEGDLDSLIQPVIQEHQ 351


>gi|313816439|gb|EFS54153.1| peptide chain release factor 2 [Propionibacterium acnes HL059PA1]
 gi|313827262|gb|EFS64976.1| peptide chain release factor 2 [Propionibacterium acnes HL063PA2]
 gi|314917824|gb|EFS81655.1| peptide chain release factor 2 [Propionibacterium acnes HL050PA1]
 gi|314919714|gb|EFS83545.1| peptide chain release factor 2 [Propionibacterium acnes HL050PA3]
 gi|314930043|gb|EFS93874.1| peptide chain release factor 2 [Propionibacterium acnes HL067PA1]
 gi|314956378|gb|EFT00690.1| peptide chain release factor 2 [Propionibacterium acnes HL027PA1]
 gi|314957250|gb|EFT01353.1| peptide chain release factor 2 [Propionibacterium acnes HL002PA1]
 gi|314967699|gb|EFT11798.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA1]
 gi|315098170|gb|EFT70146.1| peptide chain release factor 2 [Propionibacterium acnes HL059PA2]
 gi|315101677|gb|EFT73653.1| peptide chain release factor 2 [Propionibacterium acnes HL046PA1]
 gi|315109496|gb|EFT81472.1| peptide chain release factor 2 [Propionibacterium acnes HL030PA2]
 gi|327452380|gb|EGE99034.1| peptide chain release factor 2 [Propionibacterium acnes HL087PA3]
 gi|327452743|gb|EGE99397.1| peptide chain release factor 2 [Propionibacterium acnes HL083PA2]
 gi|328753837|gb|EGF67453.1| peptide chain release factor 2 [Propionibacterium acnes HL087PA1]
          Length = 370

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 152/353 (43%), Positives = 221/353 (62%), Gaps = 3/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D +     ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 16  LDASLSSIENVLDPEAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A  +D  S+ + T     +++ E++  +  +LLSG+ D  +A + + 
Sbjct: 76  RARIEDVHVLLEFAAADDKESLAEAT-TETVKLREEIDALEVRTLLSGQYDEREAVVTIR 134

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RW+E+  +K E L+    EEAGIKSAT ++  P AYG L 
Sbjct: 135 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 194

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 195 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 254

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL E   +++E   N  +S 
Sbjct: 255 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSE 314

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRTN E  +   V DGD+DDF+ A +  ++
Sbjct: 315 GN--SWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 365


>gi|222529063|ref|YP_002572945.1| peptide chain release factor 1 [Caldicellulosiruptor bescii DSM
           6725]
 gi|312622681|ref|YP_004024294.1| peptide chain release factor 1 [Caldicellulosiruptor kronotskyensis
           2002]
 gi|254790859|sp|B9MR68|RF1_ANATD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|222455910|gb|ACM60172.1| peptide chain release factor 1 [Caldicellulosiruptor bescii DSM
           6725]
 gi|312203148|gb|ADQ46475.1| peptide chain release factor 1 [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 355

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 117/343 (34%), Positives = 177/343 (51%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                ++   L  K  DP +     E + LM+E  +L   +   +E +  L       EL
Sbjct: 5   LQVIEEKYLELEKKISDPEIISQPQEWQKLMKEHSNLQPIVEKFREYKRILDTIKEAEEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              + D    +   + L R K + E  +       L     D  +  +E+ AGAGG E+ 
Sbjct: 65  LDTDLDEDFEKLVKEELNRAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE++ +K E +   + +  G K    +I G  AY  LK E GVHR+ 
Sbjct: 125 LFAAELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +E+EI E D  IDT+RA GAGGQHVN T+SAVR
Sbjct: 185 RVPVTESGGRIHTSTATVAVLP-EVEDVEVEIREEDLEIDTFRAGGAGGQHVNKTESAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           I H PTG+VV CQ ERSQH N+ +A  +LRA+LY+     +++        ++++G G  
Sbjct: 244 IVHKPTGIVVTCQDERSQHANRDRAMKILRARLYDYYQSIQQKEIE--SQRRSQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R  +       +LDG+LD+ + A +
Sbjct: 302 SERIRTYNF-PQGRVTDHRIGLTLYKLEQILDGELDEIIDALI 343


>gi|330967416|gb|EGH67676.1| peptide chain release factor 1 [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 360

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 116/346 (33%), Positives = 174/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  ++   ++     D      L
Sbjct: 9   LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYTQLARVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +  +  +         Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LKDSDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGESVYGKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+P+G+VV+CQ+ERSQHKN+A+A + L AKL +   Q       I    K  +G G   
Sbjct: 249 THLPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAANAIASERKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+   S  +VL G +D  ++  LA  +
Sbjct: 307 ERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQ 351


>gi|330814308|ref|YP_004358547.1| peptide chain release factor 2 [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327487403|gb|AEA81808.1| peptide chain release factor 2 [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 312

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 172/307 (56%), Positives = 233/307 (75%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           +++E+ HL+  ++  K  ++ L +   L+EL  +++D ++ +E   +L++++L++   + 
Sbjct: 2   VIKEKNHLERILNDYKSYKEELTNIKELVELNTKDNDENLTKELEMSLKKLELKIREIEL 61

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
              LS + D  D Y+E+HAGAGGTESQDWA ML  MY +WAEK+ F    +    GEE G
Sbjct: 62  FCFLSKKNDELDVYVEIHAGAGGTESQDWAEMLRTMYIKWAEKKSFSFSLISETKGEEVG 121

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
            KS+T+ I+G  AYG+L+ E GVHRLVRISP+DS+ RRHTSF+S+WVYPVV++S+ ++I+
Sbjct: 122 FKSSTIKIEGKYAYGFLRHESGVHRLVRISPFDSDKRRHTSFASVWVYPVVNESVVVDIN 181

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           + D RIDTYR+SGAGGQHVNTTDSAVRITH PT +VVQCQ ERSQHKNK  A NML+A+L
Sbjct: 182 DKDLRIDTYRSSGAGGQHVNTTDSAVRITHQPTNIVVQCQNERSQHKNKDTAMNMLKARL 241

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YELELQK++E +   ESSKT+IGWG QIRSYVLQPYQMVKD RT +E+T P  VLDG L+
Sbjct: 242 YELELQKKKEESKSVESSKTDIGWGHQIRSYVLQPYQMVKDSRTGLERTDPDKVLDGHLN 301

Query: 345 DFMKATL 351
            F++ +L
Sbjct: 302 PFLEESL 308


>gi|327329965|gb|EGE71719.1| peptide chain release factor 2 [Propionibacterium acnes HL097PA1]
          Length = 370

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 151/353 (42%), Positives = 221/353 (62%), Gaps = 3/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D +     ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 16  LDASLSSIENVLDPEAKKAEIADLERQVAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A  +D  S+ + T     +++ E++  +  +LLSG+ D  +A + + 
Sbjct: 76  RARIEDVHVLLEFAAADDKESLAEAT-TETVKLREEIDALEVRTLLSGQYDEREAVVTIR 134

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RW+E+  +K E L+    EEAGIK+AT ++  P AYG L 
Sbjct: 135 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKAATFVVHAPFAYGTLS 194

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 195 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 254

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL E   +++E   N  +S 
Sbjct: 255 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSE 314

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRTN E  +   V DGD+DDF+ A +  ++
Sbjct: 315 GN--SWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 365


>gi|302186444|ref|ZP_07263117.1| peptide chain release factor 1 [Pseudomonas syringae pv. syringae
           642]
          Length = 360

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 116/346 (33%), Positives = 174/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  ++   ++     D      L
Sbjct: 9   LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYAQLLRVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +  +  +         Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LKDSDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGESVYGKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+P+G+VV+CQ+ERSQHKN+A+A + L AKL +   Q       I    K  +G G   
Sbjct: 249 THLPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAANAIASERKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+   S  +VL G +D  ++  LA  +
Sbjct: 307 ERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQ 351


>gi|317048556|ref|YP_004116204.1| peptide chain release factor 1 [Pantoea sp. At-9b]
 gi|316950173|gb|ADU69648.1| peptide chain release factor 1 [Pantoea sp. At-9b]
          Length = 360

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 114/337 (33%), Positives = 175/337 (51%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     +E Q    D      L
Sbjct: 9   LEALQERHEEVEALLGDAGVIADQERFRALSREYAQLSDVTRCFREWQQVQEDVETAEML 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE     +  +  +E +    L      D    ++EV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQEELKTSREKREVLEQQLQVLLLPKDPDDERPCFVEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +  +DGE  G K     + G  AYG  K E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWQVEIISSNDGEHGGYKEVIARVTGDGAYGRFKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +I+  D +IDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVMPELPEAELPDINPGDLKIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A  +L A+++  E+ KR E      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALAVLGARIHAAEMAKRHE--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           IR+Y   P   V D R N+      + ++G LD  ++
Sbjct: 307 IRTYNF-PQGRVTDHRINLTIYRLDETMEGKLDSLIE 342


>gi|284039842|ref|YP_003389772.1| peptide chain release factor 1 [Spirosoma linguale DSM 74]
 gi|283819135|gb|ADB40973.1| peptide chain release factor 1 [Spirosoma linguale DSM 74]
          Length = 357

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 112/350 (32%), Positives = 177/350 (50%), Gaps = 12/350 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  +   +R + +  +   P    +      L +E + L+  +   +  Q  L +   
Sbjct: 1   MLDQLEAIRERFNEVAQQIVQPEAVSDQKRFMKLSKEYKDLEKIVVQYQAYQQLLEEIDN 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQF----ESLLSGEADSNDAYLEVHAGAGG 127
             ++   E D    +     L  +    E  +       +     DS +  LE+  G GG
Sbjct: 61  AKKIIATEKDEDFREMAKGELDELLPRRETLEETLKEMLMPKDPNDSKNVILEIRGGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY R+ EK  ++   ++  +G   G K     I+G + YG LK E GV
Sbjct: 121 DEAAIFAGDIFRMYQRFCEKMGWRMSLVDFTEGTSGGYKEIITEIEGEDVYGKLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +S+ V P   + +++EI+ +D R DT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRVPATETQGRIHTSAASVAVLP-EAEEVDVEINMNDIRKDTFCSSGAGGQSVNTTY 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+VVQCQ ERSQ KN  +A  +LR++LYE+ELQK  +   I    KT +G
Sbjct: 240 SAVRLTHIPTGLVVQCQDERSQLKNFDKALTVLRSRLYEIELQKHND--AIASQRKTMVG 297

Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            G +   IR+Y   P   V D R  +   +   V+DG + +F++     +
Sbjct: 298 SGDRSDKIRTYNY-PQSRVTDHRIGLTVYNLPSVMDGGIGEFIEQLRIAE 346


>gi|15896138|ref|NP_349487.1| peptide chain release factor 1 [Clostridium acetobutylicum ATCC
           824]
 gi|20139340|sp|Q97F68|RF1_CLOAB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|15025931|gb|AAK80827.1|AE007785_12 Protein chain release factor A [Clostridium acetobutylicum ATCC
           824]
 gi|325510292|gb|ADZ21928.1| peptide chain release factor 1 [Clostridium acetobutylicum EA 2018]
          Length = 359

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 115/347 (33%), Positives = 187/347 (53%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    +   L+ K  DP +  N  E + L +E   ++N +   +E +    D     E+
Sbjct: 5   LEFIESKYDELSVKISDPSVMANQSEWQKLCKEHSEVENIVLKYREYKKAKEDLEADKEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
             ++ D  + +   + ++ ++  V   + E           DS + ++E+  G GG E+ 
Sbjct: 65  LRDKIDAELKEMVEEEIKELEKSVVDYEEELRVMLLPKDPNDSKNVFVEIRGGTGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE++ + TE +  ++ +  G K    ++KG  AY  +K E G HR+ 
Sbjct: 125 LFAADLFRMYTRYAERQGWHTEVMSANETDIGGFKEIVFMVKGNGAYSRMKYESGTHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P   D ++IEI+ +D RID +RASG GGQ VNTTDSAVR
Sbjct: 185 RVPNTESSGRIHTSAATVAVLP-EVDDVDIEINPNDIRIDVFRASGHGGQCVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ E+ Q KNK +A  +LRA+LYE    +R   A I E+ + ++G G  
Sbjct: 244 ITHLPTGIVVSCQDEKRQLKNKEKAMKVLRARLYEKAEAERN--AGIAENRRNQVGSGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R  +        LDGD+D+ +   +  ++
Sbjct: 302 SERIRTYNF-PQGRITDHRIGLTIYKLEQFLDGDIDEVINGLITAEQ 347


>gi|95929013|ref|ZP_01311758.1| peptide chain release factor 1 [Desulfuromonas acetoxidans DSM 684]
 gi|95134914|gb|EAT16568.1| peptide chain release factor 1 [Desulfuromonas acetoxidans DSM 684]
          Length = 358

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 117/345 (33%), Positives = 173/345 (50%), Gaps = 11/345 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCD 68
           +FD  +  V R   +     DP +  +  + + L RE   L   +   +     Q  + D
Sbjct: 3   IFDKLEEVVDRFQEVEGLLSDPTVLSDQNKFRELTREHAELSEPVEVYRRYRQIQQEIED 62

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           N  L+     +      +E        +   E      L     D  +  LE+ AG GG 
Sbjct: 63  NRELMRDDDPDMREMAREELPALEDECEHLAEKLTLLMLPKDPNDGKNIILEIRAGTGGD 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L R Y+R+AEK ++K E +   +    G K    +I G N Y  LK E G H
Sbjct: 123 EAALFAGDLFRAYSRYAEKHRWKVEIMSSSESGVGGFKEVIAMISGENVYSRLKYESGTH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS  ++ V P   + +++EI+ SD RID YRASGAGGQHVN T+S
Sbjct: 183 RVQRVPETETQGRIHTSACTVAVLP-EAEEVDLEINPSDLRIDLYRASGAGGQHVNKTES 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITHIPTGVVV CQ E+SQHKNKA+A  +LR+++ +    + E+ A +    K+++G 
Sbjct: 242 AVRITHIPTGVVVACQDEKSQHKNKARAMKVLRSRILDAM--EAEKHAEMAADRKSQVGS 299

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G    +IR+Y   P     D R  +       ++ GDLD+   A 
Sbjct: 300 GDRSERIRTYNF-PQGRCTDHRIGLTLYKLDAIMQGDLDEVFDAL 343


>gi|109898878|ref|YP_662133.1| peptide chain release factor 1 [Pseudoalteromonas atlantica T6c]
 gi|119361579|sp|Q15SQ9|RF1_PSEA6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|109701159|gb|ABG41079.1| bacterial peptide chain release factor 1 (bRF-1) [Pseudoalteromonas
           atlantica T6c]
          Length = 362

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 118/339 (34%), Positives = 185/339 (54%), Gaps = 9/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   +      P +  +  + + L +E   L+  +    + Q    D     E+
Sbjct: 9   LESLTERFEEVQALVSQPEIIADQDKYRALTKEYSQLEGVVKCFADYQGAQGDFESAQEM 68

Query: 76  ALEEDDCSILQETSDNL---QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E D         +     Q I+   +  Q   L     D ++ ++E+ AGAGG E+  
Sbjct: 69  MQESDPEMREMAQEEYKSSKQAIEQYEDELQILLLPKDPNDESNCFIEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE R++K E + +++G+  G K     I G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAEARRWKVEVVTMNEGDHGGYKEVIANIIGDGAYGVLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P V +S  IE++++D +IDT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVVVMPEVPESEAIEVNKADLKIDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+P+G+VV+CQ ERSQHKN+A+A  +L+++L +LE +KR+       + +  +  G   
Sbjct: 249 THVPSGIVVECQDERSQHKNRAKAMAVLQSRLNKLEEEKRQAE--ETSTRRNLVASGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +IR+Y   P   V D R N+      DV+ GDLD  ++
Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYRLDDVVAGDLDAVLE 344


>gi|319790214|ref|YP_004151847.1| peptide chain release factor 1 [Thermovibrio ammonificans HB-1]
 gi|317114716|gb|ADU97206.1| peptide chain release factor 1 [Thermovibrio ammonificans HB-1]
          Length = 365

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 118/347 (34%), Positives = 185/347 (53%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   ++   +      P +  +  + + L +E + L        E +         LE+
Sbjct: 9   LEKIAKKFKEIEENLGKPEVIADQKKFQTLAKEHKELQPIYDTYMEYKKTRQGIEEALEI 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
               ++  +++   +  + ++   E  +       +     D  +  LE+ AGAGG E+ 
Sbjct: 69  IEAGEEEELVELAKEEKKELEKRAEELEGELKKLLIPKDPNDEKNVILEIRAGAGGEEAA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE++ +K E L +++    GIK     I G  AY  LK E GVHR+ 
Sbjct: 129 LFAQDLFRMYCRYAERKGWKVEILSMNETGLGGIKEVVATISGKGAYSRLKYESGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ + P   + +EIEI ESD +IDTYR+SGAGGQHVNTTDSAVR
Sbjct: 189 RIPVTESGGRIHTSTATVAILP-EAEEVEIEIKESDLKIDTYRSSGAGGQHVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV C  ERSQ +N+ +A  +LRA+L EL   +R++   +  + K ++G G  
Sbjct: 248 ITHLPTGIVVTCSNERSQIQNRIKAMKILRARLKELY--ERQQKEKMDSARKAQVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +   +  + LDGDLD+ + A  A ++
Sbjct: 306 SEKIRTYNF-PEGRVTDHRIKLTLYNLQEFLDGDLDEMIDALAAAEQ 351


>gi|312795903|ref|YP_004028825.1| peptide Chain Release Factor 1 (RF-1) [Burkholderia rhizoxinica HKI
           454]
 gi|312167678|emb|CBW74681.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Burkholderia
           rhizoxinica HKI 454]
          Length = 365

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 178/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +RL  LN       +  ++ + + L RE   L   +    + +    D     EL
Sbjct: 14  LEQLTKRLPELNELLSREDVTSDLDQYRKLTREHAELAPVVEQYAQWKTARNDEATAQEL 73

Query: 76  -ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
                       E +    R++      Q   L     D  + ++E+ AG GG ES  +A
Sbjct: 74  LTDPSMRDFAEDELNTARSRMEQLERDLQKMLLPKDPNDERNIFVEIRAGTGGDESALFA 133

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE+ +++ E +     +  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 134 GDLLRMYLRYAERHRWQVEMMSESASDLGGYKEVIVRIIGQGAYSRLKFESGGHRVQRVP 193

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  EIE++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 194 ATETQGRIHTSACTVAVMPEADEIAEIELNPADLRIDTFRASGAGGQHINKTDSAVRITH 253

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQHKNK +A  +L A++ +   Q +E+ A    + K+ +G G    +
Sbjct: 254 LPTGIVVECQDDRSQHKNKDRAMKVLAARIKDK--QYQEQHAKEAATRKSLVGSGDRSER 311

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++DGDLD  + A ++  +
Sbjct: 312 IRTYNF-PQGRLTDHRINVTLYKLEQMMDGDLDALIDALVSEHQ 354


>gi|258621065|ref|ZP_05716099.1| Peptide chain release factor 1 [Vibrio mimicus VM573]
 gi|258626137|ref|ZP_05720985.1| Peptide chain release factor 1 [Vibrio mimicus VM603]
 gi|262170842|ref|ZP_06038520.1| peptide chain release factor 1 [Vibrio mimicus MB-451]
 gi|258581492|gb|EEW06393.1| Peptide chain release factor 1 [Vibrio mimicus VM603]
 gi|258586453|gb|EEW11168.1| Peptide chain release factor 1 [Vibrio mimicus VM573]
 gi|261891918|gb|EEY37904.1| peptide chain release factor 1 [Vibrio mimicus MB-451]
          Length = 362

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 181/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72
            ++ V+R   +     DP +  +  + + L +E   L+      +  Q    D      +
Sbjct: 9   LESLVERYEEVQHLLGDPAVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +    E       E       I+   +  Q   L     D  + +LE+ AGAGG E+  
Sbjct: 69  AQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AEK+ ++ E +   + E  G K     + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P + ++   EI  SD +IDT+R+SGAGGQHVNTTDSA+RI
Sbjct: 189 VPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E  KR     I ++ +  +G G   
Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAE--ISDTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+     ++V++GD+   ++  +   +
Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTVYRLTEVMEGDMQSLIEPVIHEHQ 351


>gi|91776824|ref|YP_546580.1| peptide chain release factor 1 [Methylobacillus flagellatus KT]
 gi|119361559|sp|Q1GYE8|RF1_METFK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91710811|gb|ABE50739.1| bacterial peptide chain release factor 1 (bRF-1) [Methylobacillus
           flagellatus KT]
          Length = 360

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 112/344 (32%), Positives = 181/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +RL  LN       +  ++   + + RE   +   +   +  +    D      +
Sbjct: 9   LATLSERLDELNRLLSSEDVTNDIDNYRKITREHAEITPIVEQFRAYEQAEIDIKEAQAM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +     QE ++  ++   ++E + Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 69  LADPEMKEFAQEETEAGKQKLDDIEKQLQKLLLPKDPNDERNIFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE++ +K E +  ++ E  G K     I+G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAERQGWKVEIVSANESEVGGYKEIIAKIEGFGAYSKLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P VD+  ++ I+ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ETETQGRIHTSACTVAVLPEVDEVSDVTINPADIRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            PTG+VV+CQ  RSQH NKAQA  +L A++   ++ +++  + I    ++ IG G    +
Sbjct: 249 FPTGIVVECQDGRSQHSNKAQAMQVLAARIKAKQVDEQQ--SKIASERRSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       + +GD+D+ + A  A  +
Sbjct: 307 IRTYNY-PQGRITDHRINLTLYKIDAITEGDMDELINALAAEHQ 349


>gi|283850198|ref|ZP_06367487.1| peptide chain release factor 2 [Desulfovibrio sp. FW1012B]
 gi|283574224|gb|EFC22195.1| peptide chain release factor 2 [Desulfovibrio sp. FW1012B]
          Length = 314

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 145/311 (46%), Positives = 208/311 (66%), Gaps = 1/311 (0%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           ++RE+  L   ++  +++     D    + LA +++   IL   ++ +  +  E+   + 
Sbjct: 4   ILREKSVLTAKVTGGEKLLAAKADLDEWMSLAKDDNSPEILDALAEQIVSLGSELADAEL 63

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
            +   G  D+ DA LE+H GAGGTE+QDWA MLLRMY RWAE+++F  + L+   G+EAG
Sbjct: 64  -AAFFGPEDNADAILEIHPGAGGTEAQDWAEMLLRMYRRWAERKQFGIKVLDFLPGDEAG 122

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           +KS TL I GP AYG L  E+G+HRL+RISP+DS+ RRHTSF+S+ VYP     I+I++ 
Sbjct: 123 VKSVTLQISGPYAYGLLDAEKGIHRLIRISPFDSSGRRHTSFASVDVYPDAGLDIDIDVK 182

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           E D R+D +RASG GGQHVN T SA+RITH+PTG+VVQCQ E+SQH+N+  A  +L+A+L
Sbjct: 183 EEDLRVDVFRASGPGGQHVNKTSSAIRITHLPTGIVVQCQNEKSQHRNRESAMKVLKARL 242

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           Y+LEL+K +        SK  IG+G QIR+Y +QPYQ+VKD RT +E      V+DG+LD
Sbjct: 243 YDLELKKIQAEKQENYDSKNAIGFGSQIRTYTMQPYQLVKDHRTGVEVGDVGAVMDGELD 302

Query: 345 DFMKATLAIKK 355
            F++  L   +
Sbjct: 303 KFIRGYLLAGR 313


>gi|269102026|ref|ZP_06154723.1| peptide chain release factor 1 [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268161924|gb|EEZ40420.1| peptide chain release factor 1 [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 362

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 117/342 (34%), Positives = 182/342 (53%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     DP +  +  + + L +E   L+      +  +    D     E+
Sbjct: 9   LETLEERYEEVQHLLGDPSVISDQDKFRSLSKEYSQLEEVTKCFQAYKQAQDDLAAAEEM 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           A E+D         +       I+   +  Q   +     D  + +LE+ AGAGG E+  
Sbjct: 69  ANEDDAEMREMAQEEIKEAKAEIERLEDELQVLLIPKDPNDERNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE+R ++ E +  +D E  G K     + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAERRGWRIEVMSANDAEHGGYKEMIAKVTGDGAYGVLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P + ++   EI+ SD +IDTYR+SGAGGQHVNTTDSA+RI
Sbjct: 189 VPATESQGRVHTSACTVAVLPEIPEAEIPEINPSDLKIDTYRSSGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR        + +  +G G   
Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRHAE--EASTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +IR+Y   P   V D R  +     ++V++GD+D  ++  L
Sbjct: 307 DRIRTYNY-PQGRVSDHRITLTIYRLNEVMEGDVDCLIQPVL 347


>gi|126701107|ref|YP_001090004.1| peptide chain release factor 1 [Clostridium difficile 630]
 gi|254977108|ref|ZP_05273580.1| peptide chain release factor 1 [Clostridium difficile QCD-66c26]
 gi|255094436|ref|ZP_05323914.1| peptide chain release factor 1 [Clostridium difficile CIP 107932]
 gi|255102693|ref|ZP_05331670.1| peptide chain release factor 1 [Clostridium difficile QCD-63q42]
 gi|255308514|ref|ZP_05352685.1| peptide chain release factor 1 [Clostridium difficile ATCC 43255]
 gi|255316188|ref|ZP_05357771.1| peptide chain release factor 1 [Clostridium difficile QCD-76w55]
 gi|255518849|ref|ZP_05386525.1| peptide chain release factor 1 [Clostridium difficile QCD-97b34]
 gi|255652028|ref|ZP_05398930.1| peptide chain release factor 1 [Clostridium difficile QCD-37x79]
 gi|255657438|ref|ZP_05402847.1| peptide chain release factor 1 [Clostridium difficile QCD-23m63]
 gi|260685003|ref|YP_003216288.1| peptide chain release factor 1 [Clostridium difficile CD196]
 gi|260688661|ref|YP_003219795.1| peptide chain release factor 1 [Clostridium difficile R20291]
 gi|296449035|ref|ZP_06890825.1| peptide chain release factor RF1 [Clostridium difficile NAP08]
 gi|296879858|ref|ZP_06903831.1| peptide chain release factor RF1 [Clostridium difficile NAP07]
 gi|306521770|ref|ZP_07408117.1| peptide chain release factor 1 [Clostridium difficile QCD-32g58]
 gi|119361524|sp|Q180Y2|RF1_CLOD6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|115252544|emb|CAJ70387.1| Peptide chain release factor 1 (RF-1) [Clostridium difficile]
 gi|260211166|emb|CBA66621.1| peptide chain release factor 1 [Clostridium difficile CD196]
 gi|260214678|emb|CBE07314.1| peptide chain release factor 1 [Clostridium difficile R20291]
 gi|296262128|gb|EFH08933.1| peptide chain release factor RF1 [Clostridium difficile NAP08]
 gi|296429147|gb|EFH15021.1| peptide chain release factor RF1 [Clostridium difficile NAP07]
          Length = 354

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 121/347 (34%), Positives = 183/347 (52%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +        L+ K  DP +  +    +  ++E   L+  +   +E +  L       E+
Sbjct: 5   LEVLEDTYKDLSEKIGDPDVINDQKVWQKYIKEHADLEPIVMKYREYKSVLDSIKESKEI 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  + +     L  ++ +V   +       L     D  +  +E+  GAGG E+ 
Sbjct: 65  LQEESDEELRELAKMELAEMEEKVAPLEEEIKILLLPKDPNDDKNVIVEIRGGAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE+R++K E L   D    G K  + +IKG  AY  LK E GVHR+ 
Sbjct: 125 LFAGDLFRMYSRYAERRRWKIELLSASDTGVGGYKEVSFMIKGKGAYSRLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS S++ V P   + +E+EI+ +D RID +R+SG GGQ VNTTDSAVR
Sbjct: 185 RIPSTESGGRIHTSTSTVAVLP-EVEDVEVEINPNDLRIDVFRSSGNGGQSVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG VV CQ  +SQ KNK QA  +L+A+LY+  L   E+  +I    K+++G G  
Sbjct: 244 VTHIPTGEVVSCQDGKSQLKNKEQALKILKARLYDKALA--EQHKDIAAERKSQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R N+        LDGD+D+ + A + + +
Sbjct: 302 SERIRTYNF-PQGRISDHRINLTLYKLDAFLDGDIDEMIDALITVDQ 347


>gi|115472651|ref|NP_001059924.1| Os07g0546600 [Oryza sativa Japonica Group]
 gi|33146529|dbj|BAC79675.1| putative translation releasing factor2 [Oryza sativa Japonica
           Group]
 gi|113611460|dbj|BAF21838.1| Os07g0546600 [Oryza sativa Japonica Group]
          Length = 460

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 130/358 (36%), Positives = 214/358 (59%), Gaps = 4/358 (1%)

Query: 1   MKLS-RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
           ++L+  +++ +      D   + ++ L  K+ D  LW +  +A+ ++     + + +  +
Sbjct: 92  VELAVARVSEVRQSAGLDQLEEEIASLEKKSADSSLWDDPSKAQEILVALTEVKDRVKLL 151

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSGEADSNDA 117
            +++ ++ +   +++L  E D          +         ++  +   LLSG  D   A
Sbjct: 152 NDLKLQVEEAETIVKLTEELDSIDTGLLEEASKIIKALNKALDNFEMTQLLSGPYDKEGA 211

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            + + AGAGGT++QDWA+MLLRMY RW EK+++KT  +E   GEEAGIKSAT+ ++G  A
Sbjct: 212 VINITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSATIELEGRYA 271

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRAS 236
           YG+L GE+G HR+VR SP+++   R TSF+ + V P+  ++S+++EI E D  I   RA 
Sbjct: 272 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESMDVEIPEEDLEISFTRAG 331

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ+VN  ++AVR+ HIPTG+ V+C +ERSQ  NK +A + L+AKL  +  ++R    
Sbjct: 332 GKGGQNVNKVETAVRMVHIPTGIAVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEI 391

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                   +  WG+QIR+YV  PY++VKD+RT  E +  + V+DG+LD F++A L  K
Sbjct: 392 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTACETSDITGVMDGELDTFIRAYLKYK 449


>gi|254468209|ref|ZP_05081615.1| peptide chain release factor 1 [beta proteobacterium KB13]
 gi|207087019|gb|EDZ64302.1| peptide chain release factor 1 [beta proteobacterium KB13]
          Length = 358

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 116/339 (34%), Positives = 178/339 (52%), Gaps = 7/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N + +   LN K     +  ++   K + +E   L   I      +  + +     E+
Sbjct: 9   LENLILKYEELNNKLSSEGITSDLDLFKKISKEHADLTPIIETYSGYKKLVKNIEEAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +     QE  DN +   +  E   Q   +     D  + +LE+ AG GG ES  +A
Sbjct: 69  LSDPEMKEFAQEEIDNSKDEIINFESKLQTLLIPKDPNDDKNIFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+AE+  +  E +  ++    G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 ADLYRMYTRYAERNNWNVEVISSNESGLGGYKEIIAKINGDGAYSKLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  +++I+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 DTETQGRIHTSACTVAVLPEADEIEDVDINPADIRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            PTG+VV+CQ +RSQH+NKAQA ++L AK+ + ++Q   + +      K+ IG G    +
Sbjct: 249 EPTGIVVECQDDRSQHRNKAQAMSILAAKIKDNQIQ--AQQSQRASERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   + D R N+       ++DGDL++ + A 
Sbjct: 307 IRTYNF-PQGRITDHRINLTLYKIDFIMDGDLEEMINAL 344


>gi|239996062|ref|ZP_04716586.1| peptide chain release factor 1 [Alteromonas macleodii ATCC 27126]
          Length = 361

 Score =  232 bits (591), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 120/346 (34%), Positives = 185/346 (53%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72
            ++ V+R   +     DP +  +  + + L +E   L++ ++     Q    +      +
Sbjct: 9   LEHLVERFEEVQALLGDPGVIGDQDKFRNLSKEFSQLEDVVAGFNAYQQAQENLASAQEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L     E      +E  D    I+      Q   L     D N+ +LE+ AGAGG E+  
Sbjct: 69  LNEDDAEMREMAQEEMKDAKAEIERLETELQVLLLPKDPNDDNNCFLEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE R ++ E +  ++GE  G K     + G   YG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAESRGWRVELVNANEGEHGGYKEVIANVSGDGVYGVLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P + +S  IEI+ ++ RIDT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVAVLPEIPESQAIEINPAELRIDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ ERSQHKN+A+A ++L+A+L ++E    +  A    + K+ +G G   
Sbjct: 249 THLPTGLVVECQDERSQHKNRAKAMSVLQARLNQIEE--EKRAAEEASTRKSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+      +V++GDL   +   L   +
Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTIYRLDEVVEGDLKQLIDPILQEHQ 351


>gi|254226890|ref|ZP_04920458.1| peptide chain release factor 1 [Vibrio cholerae V51]
 gi|125620572|gb|EAZ48938.1| peptide chain release factor 1 [Vibrio cholerae V51]
          Length = 362

 Score =  232 bits (591), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 180/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72
            ++ V+R   +     DP +  +  + + L +E   L+      +  Q    D      +
Sbjct: 9   LESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +    E       E       I+   +  Q   L     D  + +LE+ AGAGG E+  
Sbjct: 69  AQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPDDDRNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AEK+ ++ E +   + E  G K     + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P + ++   EI  SD +IDT+R+SGAGGQHVNTTDSA+RI
Sbjct: 189 VPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E  KR     I ++ +  +G G   
Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAE--ISDTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+     ++V++GD+   +   +   +
Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTVYRLTEVMEGDMQSLIDPVIHEHQ 351


>gi|161349962|ref|YP_047013.2| peptide chain release factor 1 [Acinetobacter sp. ADP1]
 gi|61214614|sp|Q6F9S2|RF1_ACIAD RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 362

 Score =  232 bits (591), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 116/339 (34%), Positives = 173/339 (51%), Gaps = 7/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    + L RE   L+  +    + +    D      +
Sbjct: 9   LDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLNEIVDVWSKYRQAEEDIETAESM 68

Query: 76  ALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + QE     +  I+          +     D+N AYLEV AG GG E+  ++
Sbjct: 69  LSDPDFKDMAQEEIKENRALIEQLEGDLNILMIPKDPNDANAAYLEVRAGTGGDEAAIFS 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+++AE R ++ E L  ++GE  G K     + G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSKYAESRGWRIEVLSENEGEHGGYKEVICRVDGDGVYGRLKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P VD    +EI+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTGVVV+CQ+ERSQHKNKA+A  +L ++L     ++  +     E  +  +G G    +
Sbjct: 249 VPTGVVVECQEERSQHKNKAKAMALLVSRLENA--KRAAQETATSEMRRDLVGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   + D R N+       +++GDL + + + 
Sbjct: 307 IRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 344


>gi|261209906|ref|ZP_05924207.1| peptide chain release factor 1 [Vibrio sp. RC341]
 gi|260841092|gb|EEX67617.1| peptide chain release factor 1 [Vibrio sp. RC341]
          Length = 362

 Score =  232 bits (591), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 181/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72
            ++ V+R   +     DP +  +  + + L +E   L+      +  Q    D      +
Sbjct: 9   LESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +    E       E       I+   +  Q   L     D  + +LE+ AGAGG E+  
Sbjct: 69  AQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AEK+ ++ E +   + E  G K     + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P + ++   EI  SD +IDT+R+SGAGGQHVNTTDSA+RI
Sbjct: 189 VPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E  KR     I ++ +  +G G   
Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAE--ISDTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+     ++V++GD+   ++  +   +
Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTVYRLTEVMEGDMQSLIEPVIHEHQ 351


>gi|271500557|ref|YP_003333582.1| peptide chain release factor 1 [Dickeya dadantii Ech586]
 gi|270344112|gb|ACZ76877.1| peptide chain release factor 1 [Dickeya dadantii Ech586]
          Length = 361

 Score =  232 bits (591), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 115/337 (34%), Positives = 174/337 (51%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     +P +  ++   + L RE   L +     +  Q    D      +
Sbjct: 9   LEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFERWQQTQDDIETAELM 68

Query: 76  ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +       E        +   +  Q   L     D    +LE+ AG GG E+  +A
Sbjct: 69  LDDPEMRDLAQDELQAAKVASEDLEQQLQVLLLPKDPDDERGCFLEIRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R++K E +   DGE  G K     + G  AYG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESRRWKVEIMSASDGEHGGYKEVIAKVVGDGAYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P V ++   +I+ SD RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEVPEAELPDINPSDLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLAARIRAAEMHKRQQE--EASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           IR+Y   P   V D R N+      + ++G LD  ++
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLDMLIQ 342


>gi|325264746|ref|ZP_08131475.1| peptide chain release factor 2 [Clostridium sp. D5]
 gi|324030038|gb|EGB91324.1| peptide chain release factor 2 [Clostridium sp. D5]
          Length = 310

 Score =  232 bits (591), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 158/309 (51%), Positives = 221/309 (71%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+  + L  ++  I+++     D  +L+E++ EE D   +    + L R + E E  + +
Sbjct: 1   MQHLKALQESVKQIEQLYADHEDIGLLIEMSEEEPDDETIGGIEEELDRFEEEFEELRIQ 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LL+GE DS+ A + +HAGAGGTES DWANML RMY+RWAEK+ F  E L+  DG+ AGI
Sbjct: 61  TLLTGEYDSSSAIVTLHAGAGGTESCDWANMLYRMYSRWAEKKGFSLEVLDYLDGDVAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K  T  ++G NAYG+L+ E+GVHRLVRISP+++  +R TSF+S  V P ++D+I+IEI+E
Sbjct: 121 KGVTFEVEGENAYGYLRSEKGVHRLVRISPFNAAGKRQTSFASCDVIPDIEDNIDIEINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            + RIDTYR+ GAGGQHVN T SAVRITH+PTG+VVQCQ ERSQH NK +A  ML+AKLY
Sbjct: 181 EELRIDTYRSGGAGGQHVNKTSSAVRITHLPTGIVVQCQNERSQHMNKDKAMQMLKAKLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            L+ Q++ +  +       EIG+G QIRSYV+QPY +VKD RTN+E ++ + V+DG+LD 
Sbjct: 241 LLKQQEQADKVSGIRGEVKEIGFGSQIRSYVMQPYTLVKDHRTNMEISNVNGVMDGNLDP 300

Query: 346 FMKATLAIK 354
           F+ A L++K
Sbjct: 301 FINAYLSMK 309


>gi|269961569|ref|ZP_06175931.1| Peptide chain release factor 1 [Vibrio harveyi 1DA3]
 gi|269833610|gb|EEZ87707.1| Peptide chain release factor 1 [Vibrio harveyi 1DA3]
          Length = 362

 Score =  232 bits (591), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 116/339 (34%), Positives = 182/339 (53%), Gaps = 9/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  N  + + L +E   L+   +  +  Q    D +   ++
Sbjct: 9   LETLVERYEEVQHLLGDPDVIGNQDKFRALSKEYSQLEEVTNCFQAYQQAQDDLIAAEDM 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           A E+D+        +       I+   +  Q   L     D  + +LE+ AGAGG E+  
Sbjct: 69  ANEDDEEMREMAQEEIKEAKDAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AEKR ++ E +  ++ E  G K     + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RI
Sbjct: 189 VPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E ++R     + ++ +  +G G   
Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEQERRAAE--VSDTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +IR+Y   P   V D R N+     ++V++GDL   + 
Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTIYRLNEVMEGDLQSLID 344


>gi|120436153|ref|YP_861839.1| peptide chain release factor 2 [Gramella forsetii KT0803]
 gi|117578303|emb|CAL66772.1| peptide chain release factor 2 [Gramella forsetii KT0803]
          Length = 333

 Score =  232 bits (591), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 147/327 (44%), Positives = 223/327 (68%), Gaps = 2/327 (0%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             KT  P  W +  +A+ +M+E     + +   ++ +  + D  ++ +   E++  +   
Sbjct: 2   EEKTFAPDFWDDPKKAEQIMKEVNAEKSWVGDYEKAETLVEDLEVIYDFYKEDEATAEDV 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           +  ++       +E  +F+++LS E DS  A L++ AGAGGTES DWA ML+RMY  WAE
Sbjct: 62  QQRNDKAV--ELIEDLEFKNMLSEEGDSMSAVLQITAGAGGTESCDWAEMLMRMYLMWAE 119

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           KRK+K   L    G+ AGIK+ TL I+G  A+GWLKGE GVHRLVRISP+DSN++RHTSF
Sbjct: 120 KRKYKIRELNYQAGDVAGIKTVTLEIEGEYAFGWLKGENGVHRLVRISPFDSNAKRHTSF 179

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S ++YP+VDDSIEI+I+ SD   +T R+SGAGGQ+VN  ++AVR+ H PTG+V++  + 
Sbjct: 180 ASAYIYPLVDDSIEIDINPSDLSWETMRSSGAGGQNVNKVETAVRLRHEPTGIVIENSET 239

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQ +NK +A  +L+++L+E+ELQK++E     E SK +I WG QIR+YV+ PY++VKD+
Sbjct: 240 RSQLENKNKAMQLLKSQLFEIELQKKQEQRREIEDSKMKIEWGSQIRNYVMHPYKLVKDV 299

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAI 353
           RT  E  +  DV++G++D F+K+ L +
Sbjct: 300 RTAEETGNVDDVMNGNIDAFLKSFLMM 326


>gi|120555185|ref|YP_959536.1| peptide chain release factor 2 [Marinobacter aquaeolei VT8]
 gi|120325034|gb|ABM19349.1| bacterial peptide chain release factor 2 (bRF-2) [Marinobacter
           aquaeolei VT8]
          Length = 310

 Score =  232 bits (591), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 175/308 (56%), Positives = 228/308 (74%), Gaps = 1/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
            +ER  L+  +  I  + + L D   LL++A+EEDD   +QE   +L+ +  E+E  +F 
Sbjct: 2   GKERSDLELIVKTIDNLTNGLADAESLLDMAVEEDDEGTVQEIEADLENLDKELEKLEFR 61

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            + SGE D+N+AYL++ AG+GGTE+QDW NMLLRMY RWAE+R FK E +E+ +GE AGI
Sbjct: 62  RMFSGEMDANNAYLDIQAGSGGTEAQDWGNMLLRMYLRWAERRGFKAEIVELQEGEVAGI 121

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I+G  AYGWL+ E GVHRLVR SP+DS +RRHTSFSS++V P VDDS EIEI+ 
Sbjct: 122 KSATIHIQGDYAYGWLRTETGVHRLVRKSPFDSGNRRHTSFSSVFVSPEVDDSFEIEINP 181

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D R+D YRASGAGGQHVN T+SAVR+TH PTG+VV CQ  RSQH+NK QA   L+AKL+
Sbjct: 182 ADLRVDVYRASGAGGQHVNRTESAVRLTHNPTGIVVACQAGRSQHQNKDQAMKQLKAKLF 241

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           ELE+QKR E     E SK++IGWG QIRSYVL     +KDLRT +E ++   VLDGD+D 
Sbjct: 242 ELEMQKRNEEKQKAEDSKSDIGWGSQIRSYVLDD-SRIKDLRTKVETSNTQSVLDGDIDK 300

Query: 346 FMKATLAI 353
           F++A+L +
Sbjct: 301 FIEASLKM 308


>gi|203287543|ref|YP_002222558.1| peptide chain release factor RF-2 [Borrelia recurrentis A1]
 gi|201084763|gb|ACH94337.1| peptide chain release factor RF-2 [Borrelia recurrentis A1]
          Length = 347

 Score =  232 bits (591), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 143/348 (41%), Positives = 211/348 (60%), Gaps = 4/348 (1%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GG FD D    +L     +  + + W +   A+ +++ +  L   I   K +  +L
Sbjct: 1   MKMYGGSFDSDKIKIQLQKYEKQINNENFWNDNKRAQEILKNQNILKTKIEPWKNLICQL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   L       +          ++ +++ + ++    S    + D N A+L +H+GAG
Sbjct: 61  KDLREL---CKIAESEDDKAILERDVNKLREQYKHILTLSYFKEDIDINSAFLTIHSGAG 117

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+ DW NML R Y R++E+R +K E +++ + E  GIKS T+ IKG  AYG+LK E G
Sbjct: 118 GTEACDWVNMLYRTYLRYSERRGYKIELIDLLESE-GGIKSVTIEIKGKYAYGFLKSEVG 176

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVRISP+D+  +RHTSF+S+++ PV+DD IEI I   D R+DTYRASGAGGQHVN T
Sbjct: 177 IHRLVRISPFDAAKKRHTSFASVFIDPVIDDKIEIIIKSEDIRVDTYRASGAGGQHVNKT 236

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVRITH+ TG+V Q Q +RSQH+NK  A  +L++KLYE      ++ +   +  K +I
Sbjct: 237 SSAVRITHLKTGIVTQSQTDRSQHRNKELAMKVLKSKLYEHYKTLEQQKSKSKQQEKKDI 296

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            WG QIRSY+ QPY +VKD RT  E  +   V+DG++D+F++  L  K
Sbjct: 297 SWGNQIRSYIFQPYTLVKDHRTKFENPNIMSVMDGNIDNFIEEYLKWK 344


>gi|91228927|ref|ZP_01262825.1| peptide chain release factor 1 [Vibrio alginolyticus 12G01]
 gi|269965455|ref|ZP_06179574.1| Peptide chain release factor 1 [Vibrio alginolyticus 40B]
 gi|91187510|gb|EAS73844.1| peptide chain release factor 1 [Vibrio alginolyticus 12G01]
 gi|269829934|gb|EEZ84164.1| Peptide chain release factor 1 [Vibrio alginolyticus 40B]
          Length = 362

 Score =  232 bits (591), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 117/346 (33%), Positives = 180/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72
            +  V+R   +     DP +  N  + + L RE   L+      +  Q    D      +
Sbjct: 9   LETLVERYEEVQHLLGDPDVIGNQDKFRALSREYSQLEEVTKCFQAYQQAQEDLVAAEEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
                EE      +E  +    I+   +  Q   L     D  + +LE+ AGAGG E+  
Sbjct: 69  ANEDDEEMREMAQEEIKEAKATIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AEKR ++ E +  ++ E  G K     + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RI
Sbjct: 189 VPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E ++R     + ++ +  +G G   
Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAE--VSDTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+     ++V++GDL   +   +   +
Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTIYRLNEVMEGDLQSLIDPVIQEHQ 351


>gi|312958850|ref|ZP_07773369.1| Peptide chain release factor 1 [Pseudomonas fluorescens WH6]
 gi|311286620|gb|EFQ65182.1| Peptide chain release factor 1 [Pseudomonas fluorescens WH6]
          Length = 360

 Score =  232 bits (591), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 114/346 (32%), Positives = 172/346 (49%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +  + +   +E   ++  ++   +      D      L
Sbjct: 9   LDVLQDRFEELTALLGDGEVISDQAKFRAYSKEYAEVEPVVTTYGQWLKTHADLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE---VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +  +            Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LKDSDPDMREMAVEEVREAKDKLIALEGDLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G N YG LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGENVYGKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+RI
Sbjct: 189 VPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+P+G+VV+CQ+ERSQHKN+A+A + L AKL +   Q       I    K  +G G   
Sbjct: 249 THLPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAANAIASERKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y       V D R N+   S  ++L G +D  ++  LA  +
Sbjct: 307 ERIRTYNFA-QGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLAEYQ 351


>gi|225165725|ref|ZP_03727521.1| peptide chain release factor 2 [Opitutaceae bacterium TAV2]
 gi|224800034|gb|EEG18467.1| peptide chain release factor 2 [Opitutaceae bacterium TAV2]
          Length = 341

 Score =  232 bits (591), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 155/327 (47%), Positives = 206/327 (62%), Gaps = 3/327 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
                 W N   A+  + +   L  A+  +   + ++ D   L EL          +  +
Sbjct: 1   MGASDFWDNNERAQKHINKVNGLKRAVLPLVAFRKKVDDLDALNELIEAGSPAEQEEFGA 60

Query: 90  DNLQRIKLEV---EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           +   +    +   +  +  + L+G+ D N+A   + AGAGGTES DWA+ML RMYTRWAE
Sbjct: 61  ELTAQAAAMIGELDDLEINAFLTGQFDRNNAIFSIQAGAGGTESNDWADMLFRMYTRWAE 120

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           +R F  E  ++  G++AGI  ATLLIKG NAYG+ K E+GVHRLVRISP+DSN RRHTSF
Sbjct: 121 RRGFTVEVQDVQPGDQAGISKATLLIKGENAYGYCKAERGVHRLVRISPFDSNQRRHTSF 180

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
            ++ V   ++D I+IEI E + R+D YR+SG GGQ VNTTDSAVR+THIPTG+VV CQ E
Sbjct: 181 CAVDVIAEINDEIKIEIPEDEIRVDVYRSSGKGGQGVNTTDSAVRLTHIPTGLVVVCQNE 240

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQ KNKA A ++L+A+LYE +  ++    +     K EIGWG QIRSYVLQPYQMVKDL
Sbjct: 241 RSQIKNKASAMSILKARLYEKKQDEQRAEMDKFYGEKGEIGWGAQIRSYVLQPYQMVKDL 300

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAI 353
           RT +  +    VLDGD+D F+   L  
Sbjct: 301 RTGVNTSDTQGVLDGDIDRFINGWLRA 327


>gi|126695538|ref|YP_001090424.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9301]
 gi|126542581|gb|ABO16823.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT
           9301]
          Length = 354

 Score =  232 bits (591), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 139/344 (40%), Positives = 204/344 (59%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L  +FD      +   L   +  P  W+N  EAK  M     +   +  + + +  + D 
Sbjct: 2   LRIVFDVPRLKAKRRELEQISAQPEFWENQEEAKKQMLILDDVKAQLELLDKWKTFISDA 61

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              LEL   E +  ++ E+   L++++  ++  +FE LL GE D   A + ++AGAGGT+
Sbjct: 62  NASLELYSLEPEEEMILESKQGLKKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGGTD 121

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW  +LLRMY+RWA+  +      E+  GEEAGIKS T  I G  AYG+L+ E+G HR
Sbjct: 122 AQDWVEILLRMYSRWADNNQMSLIINELSQGEEAGIKSVTFEIDGKYAYGYLQHEKGTHR 181

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+++N +R TSF+ + V P +DD+I ++I E D  I T R+ GAGGQ+VN  ++A
Sbjct: 182 LVRISPFNANGKRQTSFAGVEVMPKLDDNISLDIPEKDLEITTSRSGGAGGQNVNKVETA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRI H+P+G+ V+C QERSQ +NK +A  +L++KL  +  ++R       +    E  WG
Sbjct: 242 VRIVHLPSGISVRCTQERSQLQNKEKAMLLLKSKLLVIAKEQRAAEVADIKGDIVEAAWG 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIR+YV  PYQMVKDLRT  E      VLDG L+ F+   L +
Sbjct: 302 NQIRNYVFHPYQMVKDLRTMQETNELDSVLDGGLEPFIHELLRM 345


>gi|152997601|ref|YP_001342436.1| peptide chain release factor 1 [Marinomonas sp. MWYL1]
 gi|189039978|sp|A6W1C2|RF1_MARMS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|150838525|gb|ABR72501.1| peptide chain release factor 1 [Marinomonas sp. MWYL1]
          Length = 362

 Score =  232 bits (591), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 116/343 (33%), Positives = 175/343 (51%), Gaps = 9/343 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
              ++   R   L        +  +    +   +E   L+  +    E Q    +     
Sbjct: 7   LKLESLSDRYDELAALLGVAEVIMDQDLFRAYSKEYAELEPVVKCFNEFQQIDENIAEAE 66

Query: 74  ELALEEDDCSILQETSDNLQ---RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            +  + D         +      + +      Q   L     DS + +LEV AG GG E+
Sbjct: 67  LMMTDADPDIKEMGVEEYKAGLAQKEELQLVLQKLLLPKDPNDSRNVFLEVRAGTGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             ++  L RMY+R+AE +++K E +   DGE  G K     I G  AY  LK E G HR+
Sbjct: 127 SIFSGDLFRMYSRYAETQRWKVEIVSASDGEHGGYKEVIARIVGEGAYSKLKFESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ V P +D+  +I I++SD RIDT+RASGAGGQHVN TDSA+
Sbjct: 187 QRVPATESQGRIHTSACTVAVMPEMDEVDDIIINKSDLRIDTFRASGAGGQHVNKTDSAI 246

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+THIPTGVVV+CQ+ERSQHKN+A+A ++L ++L   EL+K    +   E+ K+ +G G 
Sbjct: 247 RLTHIPTGVVVECQEERSQHKNRAKAMSLLASRLQAAELEK--AASEQSETRKSLVGSGD 304

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              +IR+Y   P   V D R N+      +++ G+LD  +   
Sbjct: 305 RSERIRTYNY-PQGRVTDHRINLTLYKLDEIVAGELDSLINPL 346


>gi|330811719|ref|YP_004356181.1| peptide chain release factor 1 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379827|gb|AEA71177.1| Peptide chain release factor 1 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 360

 Score =  232 bits (591), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 174/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +  + +   +E   ++  ++  K++     D      L
Sbjct: 9   LDILQDRFEELTALLGDGEVISDQNKFRTYSKEYAEVEPIVATYKQLLKVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +      ++       Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LKDSDPDMREMAVEEVREAKDQLVELESSLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G N YG LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+RI
Sbjct: 189 VPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+P+G+VV+CQ+ERSQHKN+A+A   L AKL +   Q       I    K  +G G   
Sbjct: 249 THLPSGIVVECQEERSQHKNRARAMAWLSAKLND--QQTSAAANAIASERKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y       V D R N+   S  ++L G +D  ++  LA  +
Sbjct: 307 ERIRTYNFA-QGRVTDHRVNLTLYSLDEILAGGVDAVIEPLLAEYQ 351


>gi|317401193|gb|EFV81839.1| peptide chain release factor 1 [Achromobacter xylosoxidans C54]
          Length = 360

 Score =  232 bits (591), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 181/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   RL  ++    +P    ++   + L RER  L+  +           D     E+
Sbjct: 9   LEHLCHRLIEVDALLAEPETASDMDRFRKLSRERAELEPVVEAFTAFVRGEEDLATAQEM 68

Query: 76  ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +  ++ ++   + +   +      Q   L     D    +LE+ AG GG ES  ++
Sbjct: 69  LADPELKAMAEDEIKSGRVKLESLEAALQLLLLPRDPNDGRSVFLEIRAGTGGDESALFS 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+R ++ E +     E  G K     I+G  AYG LK E G HR+ R+ 
Sbjct: 129 GDLLRMYTRYAEQRGWRVELMSESPSELGGYKEVIARIEGDGAYGRLKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ +    D+  EI I+ SD RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATEAQGRIHTSACTVAIMAEADEMSEIVINPSDLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A+L + E ++R+  +      K+ IG G    +
Sbjct: 249 LPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKETRERQ--SKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       +++GDL++   A +A  +
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKLQQIMEGDLEELTGALIAEHQ 349


>gi|282857117|ref|ZP_06266363.1| peptide chain release factor 1 [Pyramidobacter piscolens W5455]
 gi|282585052|gb|EFB90374.1| peptide chain release factor 1 [Pyramidobacter piscolens W5455]
          Length = 358

 Score =  232 bits (591), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 124/361 (34%), Positives = 184/361 (50%), Gaps = 19/361 (5%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           M L  +L  L  +          + L  K  DP +  ++ E + L R+   L+  +   +
Sbjct: 1   MNLEPKLRELEAI---------YAELEKKMADPAVVSDIKEMQNLGRKHSELEEVVGDYR 51

Query: 61  EIQDRLCDNLILLELALEEDDCSI---LQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
             +    +     EL    D         E  +    +    E  +   L     D  D 
Sbjct: 52  RYRQVRDEIAEAKELVGGGDHELAELAKMELEEKEPLLGKIEEQLRVALLPKDPNDEKDV 111

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            +E+ AG GG E+  +A  L RMY+R+AE+  +K E ++ ++ E  G K   L I G   
Sbjct: 112 IMEIRAGTGGDEASLFAADLFRMYSRYAEREGWKLEIVDENETEVGGYKEIVLQIHGRGV 171

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           Y  LK E GVHR+ R+   ++  R HTS +++ V P V D I+IEI   D +IDTYR+SG
Sbjct: 172 YSQLKYESGVHRVQRVPATEAGGRIHTSAATVVVMP-VADDIDIEIRPEDLKIDTYRSSG 230

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           AGGQHVN TDSAVRITH+PTG+VV CQ ERSQ KN+A+A  +L+ +LY+ E++K+   + 
Sbjct: 231 AGGQHVNMTDSAVRITHLPTGLVVTCQDERSQIKNRAKALQVLKTRLYDAEVEKQR--SA 288

Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                K  IG G    +IR+Y   P   V D R  +       ++DGDL + +KA +  +
Sbjct: 289 ESAERKGMIGSGDRSERIRTYNY-PQNRVTDHRIGLTLYKLEYMMDGDLYEMIKALVMAE 347

Query: 355 K 355
           +
Sbjct: 348 Q 348


>gi|254479978|ref|ZP_05093226.1| peptide chain release factor 2 [marine gamma proteobacterium
           HTCC2148]
 gi|214039540|gb|EEB80199.1| peptide chain release factor 2 [marine gamma proteobacterium
           HTCC2148]
          Length = 310

 Score =  232 bits (590), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 163/307 (53%), Positives = 216/307 (70%), Gaps = 1/307 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
            RER  L+  +  I++++    D   LLE+A  EDD   L E    +  +  ++E  +F 
Sbjct: 2   GRERSSLETIVLTIEKLEGGATDAADLLEMAAAEDDQDTLTEVISEIDALVAQLERLEFR 61

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            +  GE D+N+A+L++ +G+GGTE+QDWA M+LRMY RW E + FKT+ +E   G+ AGI
Sbjct: 62  RMFDGEMDANNAFLDIQSGSGGTEAQDWAEMMLRMYLRWGEAKGFKTQLMEASAGDVAGI 121

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+  +G  A+GWL+ E GVHRLVR SP+DS +RRHTSFSS++V P +DD+IEIEI+ 
Sbjct: 122 KSATIKFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSSVFVSPEIDDNIEIEINP 181

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D R+DTYRASGAGGQHVN TDSAVR+TH PTG+ VQCQ ERSQH+N+  A  +LRAKLY
Sbjct: 182 ADLRVDTYRASGAGGQHVNKTDSAVRLTHNPTGIAVQCQTERSQHQNRDNAMKLLRAKLY 241

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+E+ KR E     E  K +IGWG QIRSYVL     +KDLRT +E  +   VLDG LD 
Sbjct: 242 EMEMLKRNEEKQAMEDGKADIGWGSQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGSLDQ 300

Query: 346 FMKATLA 352
           F++A+L 
Sbjct: 301 FIEASLK 307


>gi|154482489|ref|ZP_02024937.1| hypothetical protein EUBVEN_00156 [Eubacterium ventriosum ATCC
           27560]
 gi|149736690|gb|EDM52576.1| hypothetical protein EUBVEN_00156 [Eubacterium ventriosum ATCC
           27560]
          Length = 356

 Score =  232 bits (590), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 120/351 (34%), Positives = 190/351 (54%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D  ++R   +  +  DP++  +    + LM+E+  L   +   K  ++       
Sbjct: 1   MFDKLDGILERYDEIMEQLNDPNVVSDQNNFRKLMKEQSDLAPIVEAYKAYKEAKQTVED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   + +   K +     E  +   L   E D  +  +E+  GAGG
Sbjct: 61  SLMILDEESDEEMRELAKEEMNEAKEQITELEEKLKILLLPKDENDDKNVVVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY  +AE + +KTE + +++    G K    +I G  AY  LK E GV
Sbjct: 121 DEAALFAAELYRMYCMYAETQHWKTEMISVNENGLGGFKEVVFMINGQGAYSKLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS +++ + P   + +++EI  +DCR D +RASG GGQ VNTTD
Sbjct: 181 HRVQRIPVTESGGRIHTSTATVAIMP-EAEEVDVEIDMNDCRFDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+ CQ E+SQ KNK +A  +LRA+LYELE QK+++     E+ +++IG
Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKALKVLRARLYELECQKKQD--AESEARRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R         ++L+G L++ +   +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKFTSHRLDEILNGHLEEIIDNCIAADQ 347


>gi|330502033|ref|YP_004378902.1| peptide chain release factor 1 [Pseudomonas mendocina NK-01]
 gi|328916319|gb|AEB57150.1| peptide chain release factor 1 [Pseudomonas mendocina NK-01]
          Length = 360

 Score =  232 bits (590), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 122/346 (35%), Positives = 179/346 (51%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            DN   R   L     D  +     + +   +E   ++  I+  +E++    D      L
Sbjct: 9   LDNLSDRFEELTALLGDAEVISKQSQFRAYSKEYAEIEPVIATFRELRKVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE---VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +  Q  +      +  Q   L     D  + YLE+ AG GG E+  
Sbjct: 69  LKDSDPDLREMAELEVDQAKEALVGLEDKLQRMLLPKDPNDGRNVYLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AEK+ ++ E L  ++GE  G K     ++G N Y  LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAEKQGWRVEVLSANEGEHGGFKEVIARVEGDNVYAKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVNTTDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG VV+CQ+ERSQHKN+A+A   L AKL +   Q       I E+ K  +G G   
Sbjct: 249 THIPTGTVVECQEERSQHKNRAKAMAWLAAKLQD--QQDAAAHKEISETRKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+   S ++V+ G ++  ++  LA  +
Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYSLNEVIAGGVEAVIEPLLAEYQ 351


>gi|189485333|ref|YP_001956274.1| peptide chain release factor 2 [uncultured Termite group 1
           bacterium phylotype Rs-D17]
 gi|170287292|dbj|BAG13813.1| peptide chain release factor 2 [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 329

 Score =  232 bits (590), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 162/323 (50%), Positives = 218/323 (67%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +P  W +  +AK  M E   L N      ++   + D + L  LA +E+D  +L++  D 
Sbjct: 2   EPDFWNDQNKAKKTMAELDDLKNVCRLWYDMSREVKDLIDLSMLATDENDEKLLKDVEDG 61

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
            ++++ E+   +  + L GE D N+A + +HAGAGGTES DWA +LLRMY+RWAE + FK
Sbjct: 62  SKKLEKELSVFEVRTKLGGEHDKNNAIISIHAGAGGTESCDWAQILLRMYSRWAEDKGFK 121

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
           TE ++  DG+EAGIK+ T++I+G  AYG+L+ E GVHRLVRISP+DSN RRHTSFSS+ V
Sbjct: 122 TEVVDSLDGDEAGIKNITMIIRGEYAYGFLQSEIGVHRLVRISPFDSNKRRHTSFSSVDV 181

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P V+DSI+I I + D RIDTYRASGAGGQH+N TDSAVRITH+ T + VQ Q +RSQ K
Sbjct: 182 IPEVEDSIDIIIEDKDIRIDTYRASGAGGQHINKTDSAVRITHLATEITVQSQNDRSQIK 241

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A  +L+A+LYELE +K+        + K  I W  QIRSYV  PYQ+VKD RT  +
Sbjct: 242 NRTTAMKLLKARLYELEQEKQRASYEKHYNEKGAIEWSSQIRSYVFMPYQLVKDHRTGYK 301

Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354
                 V+DGD+DDF+ A L+ K
Sbjct: 302 TLRMDLVMDGDIDDFISAYLSWK 324


>gi|323359619|ref|YP_004226015.1| protein chain release factor B [Microbacterium testaceum StLB037]
 gi|323275990|dbj|BAJ76135.1| protein chain release factor B [Microbacterium testaceum StLB037]
          Length = 370

 Score =  232 bits (590), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 144/353 (40%), Positives = 207/353 (58%), Gaps = 1/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L      +  + D D     +  L+ +   P LW +V  A+ +     H    +  I EI
Sbjct: 13  LRSTFADIQAVVDVDALKADIDRLSEEAGAPDLWDDVDNAQKVTSRLSHRQAELKRITEI 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D  +L+ELA+E DD     E    L  +K  +   + ++LL GE DS  A + + 
Sbjct: 73  EQRLDDLEVLVELAIEMDDEDSADEARRELASLKDVIGQLEVQTLLDGEYDSRSAVVTIR 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGG ++ D+A MLLRMY RWAE+ K+  + ++    E AGIKSAT  +  P AYG L 
Sbjct: 133 SGAGGDDATDFAEMLLRMYLRWAERHKYPVKVMDTSYAEGAGIKSATFEVDVPYAYGTLS 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HRL RISP+    +R TSF+++ V PV+++++E+E+ E D R+D +R+SG GGQ 
Sbjct: 193 VEAGTHRLARISPFGGADKRQTSFAAVEVIPVMEEAVEVEVPEGDIRVDVFRSSGPGGQS 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITHIPTG+VV  Q E+SQ +N+A A  +L+ +L  L+ ++          +
Sbjct: 253 VNTTDSAVRITHIPTGLVVSMQNEKSQIQNRAAAMRVLQTRLLLLKREEEAAKKKELAGT 312

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            T   WG Q+RSY L   Q+VKDLRT  E  +P+ V DGDLD  + A +  +K
Sbjct: 313 IT-ASWGDQMRSYFLYGQQLVKDLRTGYEVGNPAVVFDGDLDGLIAAGIRWRK 364


>gi|330445230|ref|ZP_08308882.1| peptide chain release factor 1 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489421|dbj|GAA03379.1| peptide chain release factor 1 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 362

 Score =  232 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 181/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72
            +  V+R   +     DP +  +    + L +E   L+      +  Q    D      +
Sbjct: 9   LETLVERYEEVQHLLGDPDVLADQNRFRALSKEYSQLEEVTKCFQAYQQAKEDLVAAEEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +    E      +E  +    I+   +  Q   L     D  + ++E+ AGAGG E+  
Sbjct: 69  AQEDDAEMREMAQEEIKEAKAEIERLADELQVLLLPKDPNDDRNCFVEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AE+R ++ E +  +  E+ G K     + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSKYAERRGWRVEVISENRAEQGGYKEMIAKVNGDGAYGILKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P V ++   EI+  D +IDT+R+SGAGGQHVNTTDSA+RI
Sbjct: 189 VPATESQGRVHTSACTVAVLPEVPEAEIPEINTGDLKIDTFRSSGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR        + +  +G G   
Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRHAE--EASTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +     ++V++GDLD  ++  L   +
Sbjct: 307 DRIRTYNY-PQGRVSDHRITLTLYRLNEVMEGDLDALIQPVLQEHQ 351


>gi|254000219|ref|YP_003052282.1| peptide chain release factor 1 [Methylovorus sp. SIP3-4]
 gi|253986898|gb|ACT51755.1| peptide chain release factor 1 [Methylovorus sp. SIP3-4]
          Length = 360

 Score =  232 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 113/339 (33%), Positives = 172/339 (50%), Gaps = 7/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +RL  LN          ++   + + RE   +   +   +  +    D      +
Sbjct: 9   LATLSERLDELNRLLSSEDATSDMDNYRKISREHAEITPIVEQYRAYEQCENDLKEAHAM 68

Query: 76  ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +  +  QE  +  +   +      Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 69  LADPEMKAFAQEEIEAGKARLEEIAMALQKLLLPKDPNDERNIFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE++++K E +   + E  G K     I+G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAERQRWKVEVVSASESEVGGYKEIIAKIEGFGAYSKLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P VD+  ++ IS +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ETETQGRIHTSACTVAVLPEVDEVSDVTISPADIRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            PTG+VV+CQ  RSQH NKAQA  +L A++     Q  E+ + I    ++ IG G    +
Sbjct: 249 FPTGIVVECQDGRSQHSNKAQAMQVLAARI--KAKQVNEQQSKIASERRSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   + D R N+       + +GD+D+ + A 
Sbjct: 307 IRTYNY-PQGRITDHRINLTLYKIDAITEGDMDELINAL 344


>gi|329964588|ref|ZP_08301642.1| putative peptide chain release factor 2 [Bacteroides fluxus YIT
           12057]
 gi|328524988|gb|EGF52040.1| putative peptide chain release factor 2 [Bacteroides fluxus YIT
           12057]
          Length = 371

 Score =  232 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 133/358 (37%), Positives = 207/358 (57%), Gaps = 11/358 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D +    ++     +T+ P  W +   A+  M++ + L   IS   E+
Sbjct: 10  IKERAEALNRYLDIEGKKIQVEEEQLRTQAPGFWDDQKAAEAQMKKVKGLQQWISGYNEV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +    L     +D+    +E  +   +    VE  + +++L  EAD  D  L+++
Sbjct: 70  KTLAEELQ--LSFDFYKDELVTEEEVDEAYVKASAAVEALELKNMLREEADQMDCVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA+ML+RMY R+AE   +K     + +G+EAGIK+ T+ I G  AYG+LK
Sbjct: 128 SGAGGTESQDWASMLMRMYLRYAETYGYKAVISNLQEGDEAGIKTCTIEISGDYAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+ I+ ++   DT+R+SGAGGQ+
Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVNINVANISWDTFRSSGAGGQN 247

Query: 243 VNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  +S VR+ +            ++++  + R Q KN+  A   LR+ LY+ ELQ R  
Sbjct: 248 VNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMA 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L 
Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGKIDGFIKAYLM 364


>gi|163843187|ref|YP_001627591.1| peptide chain release factor 2 [Brucella suis ATCC 23445]
 gi|163673910|gb|ABY38021.1| peptide chain release factor 2 [Brucella suis ATCC 23445]
          Length = 321

 Score =  232 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 203/309 (65%), Positives = 257/309 (83%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ L+++I+ I  ++  L D++ L+ +  EE D SI++     ++ +K E++ +Q +
Sbjct: 1   MRERQQLEDSINGINHLKQMLNDSVELIAMGEEEGDKSIVEGAEKTIRDLKDEIDRRQID 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGEAD+ND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+   K E +E+H+GEEAGI
Sbjct: 61  MLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+KG N+YG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+IE++++E
Sbjct: 121 KSATILVKGQNSYGMLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY
Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE  +   ++KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG +  
Sbjct: 241 EEELKKREEATDAANATKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTP 300

Query: 346 FMKATLAIK 354
           FM+A LA +
Sbjct: 301 FMEAALAHR 309


>gi|262404524|ref|ZP_06081079.1| peptide chain release factor 1 [Vibrio sp. RC586]
 gi|262349556|gb|EEY98694.1| peptide chain release factor 1 [Vibrio sp. RC586]
          Length = 362

 Score =  232 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 182/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72
            ++ V+R   +     DP +  +  + + L +E   L+      +  Q    D      +
Sbjct: 9   LESLVERYEEVQHLLGDPAVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +    E       E     + I+   +  Q   L     D  + +LE+ AGAGG E+  
Sbjct: 69  AQEDDAEMREMAQDEIKAAKEAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AEK+ ++ E +   + E  G K     + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P + ++   EI  SD +IDT+R+SGAGGQHVNTTDSA+RI
Sbjct: 189 VPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E  KR     I ++ +  +G G   
Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAE--ISDTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+     ++V++GD+   ++  +   +
Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTVYRLTEVMEGDMQSLIEPVIHEHQ 351


>gi|262038076|ref|ZP_06011481.1| peptide chain release factor 1 [Leptotrichia goodfellowii F0264]
 gi|261747896|gb|EEY35330.1| peptide chain release factor 1 [Leptotrichia goodfellowii F0264]
          Length = 359

 Score =  232 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 123/351 (35%), Positives = 187/351 (53%), Gaps = 11/351 (3%)

Query: 13  LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL- 70
           +F   D+ V +   L     DP +  +  +     +    +D  +      + R  +   
Sbjct: 1   MFQKLDDVVLKHEELTRLLMDPEVISDPKKIMEYNKALNSIDEVVKKYTYYKSRKEEMES 60

Query: 71  ---ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
               L      E    +L+E     + I    E  +   L     D  +  +E+ AGAGG
Sbjct: 61  LKEDLKAEKDPEMKEMMLEEIHTIEEEIPGLEEELKILLLPKDPNDDKNVIMEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RM+TR+AE+ ++KTE ++  +    G+K  T LIKG  AY  LK E GV
Sbjct: 121 DEAALFAADVFRMFTRYAERNRWKTEIIDKSEIGVGGLKEVTFLIKGNGAYSRLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +++ R HTS  ++ V P ++D  E+EI++SD +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPATEASGRIHTSTITVAVLPEIEDVNEVEINQSDLKIDTYRSSGAGGQHVNTTD 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VV  Q  RSQ KN+  A  +L +KLYE+E +K+ +        ++++G
Sbjct: 241 SAVRITHLPTGLVVTSQDGRSQIKNREAAMKVLASKLYEMEYEKQRKEVE--SERRSQVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       VLDGDLD+ + A +A  +
Sbjct: 299 SGDRSEKIRTYNF-PQGRVTDHRIKLTLHRLEGVLDGDLDEMIDALIAYDQ 348


>gi|229826190|ref|ZP_04452259.1| hypothetical protein GCWU000182_01562 [Abiotrophia defectiva ATCC
           49176]
 gi|229789060|gb|EEP25174.1| hypothetical protein GCWU000182_01562 [Abiotrophia defectiva ATCC
           49176]
          Length = 357

 Score =  232 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 109/351 (31%), Positives = 177/351 (50%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +    R   +  +        +  + + LM+E+  L   +   K  +        
Sbjct: 1   MFESIETLAGRYKEVTDELASGMAAADPNKFRNLMKEQSDLQPIVEKYKAYKANNEQIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
            L +  EE D  + +   + L   K  V   + E         + D  +  +E+ AG GG
Sbjct: 61  CLRMISEESDPELKELAREELAEAKAAVPEFEKELKVLLLPKDKNDDKNVIVEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A+ L RMY ++AE  ++K E L  ++    G K  T LI G  A+  LK E G 
Sbjct: 121 DEAAIFASELYRMYCKYAENNRWKPEILSFNENGLGGFKEVTFLINGKGAFSKLKYESGT 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +SN +  TS +++ + P   + +++ I  +D + D +RASG GGQ VNTTD
Sbjct: 181 HRVQRVPVTESNGKLQTSAATVAILP-EAEEVDVNIDPNDIKFDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+ CQ E+SQ KNK +A  +LR++LYELE +K    A    + K+++G
Sbjct: 240 SAVRLTHIPTGIVISCQDEKSQLKNKDKAMKVLRSRLYELECEK--AHAEEAANRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R      +   V+ GDL + ++  +   +
Sbjct: 298 SGDRSEKIRTYNF-PQGRVTDHRIKFTTHNIDGVMGGDLTEIIENLIVADQ 347


>gi|303236882|ref|ZP_07323461.1| putative peptide chain release factor 2 [Prevotella disiens
           FB035-09AN]
 gi|302483050|gb|EFL46066.1| putative peptide chain release factor 2 [Prevotella disiens
           FB035-09AN]
          Length = 371

 Score =  232 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 118/356 (33%), Positives = 210/356 (58%), Gaps = 12/356 (3%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           +++ L    + D           +T+ P  W++   A+  M++ + ++  I   + ++ +
Sbjct: 13  RVDALNHYLNIDKKKIEFEEEQLRTQAPDFWEDAERAQEQMKKVKGIEKWIKGYENVKTQ 72

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
             +  +  +     D+    ++      ++  ++E  +  ++L  E D  +  +++++GA
Sbjct: 73  ADELQLAFDFYK--DELVTEEDVDTAYAKVITDIENLELMNMLRQEEDPMECVMKINSGA 130

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PNAYGWLKGE 184
           GGTESQDWA+ML+RMY R+ E+  +K    +I +G+EAGIKS T+  +G   A+G+LK E
Sbjct: 131 GGTESQDWASMLMRMYMRYGEQHGYKVTIADIQEGDEAGIKSVTMKFEGGEYAFGFLKSE 190

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHRLVR+SP+++  +R TSF+S++V P++DD+IE+ +  +    DT+R+ GAGGQ+VN
Sbjct: 191 NGVHRLVRVSPFNAQGKRMTSFASVFVSPLIDDTIEVFVDPARVSWDTFRSGGAGGQNVN 250

Query: 245 TTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
             +S VR+ ++           ++++  + R Q KN+A+A  +L+++LY+  ++KR E  
Sbjct: 251 KVESGVRLRYMYQDPDTGEEEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRMEAQ 310

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              E+SK +I WG QIRSYV    + VKD RTN + +    V+DG +D F+KA L 
Sbjct: 311 AKVEASKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKIDGFIKAYLM 365


>gi|167564255|ref|ZP_02357171.1| peptide chain release factor 1 [Burkholderia oklahomensis EO147]
 gi|167571406|ref|ZP_02364280.1| peptide chain release factor 1 [Burkholderia oklahomensis C6786]
          Length = 360

 Score =  232 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 176/346 (50%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72
            D    RL+ LN      ++  ++ + + L RE   +   +    + +    D      L
Sbjct: 9   LDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQEL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L  A   D        +                       D  + ++E+ AG GG ES  
Sbjct: 69  LGDASMRDFAEDELRGARERMGRLAAELQTMLL--PKDPNDERNIFVEIRAGTGGDESAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R
Sbjct: 127 FAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV+CQ +RSQHKNK +A  +L A++ +   Q  E+ A    + K+ IG G   
Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N+       ++DGDLD+ + A ++  +
Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVSEHQ 349


>gi|170696251|ref|ZP_02887383.1| peptide chain release factor 1 [Burkholderia graminis C4D1M]
 gi|170138811|gb|EDT07007.1| peptide chain release factor 1 [Burkholderia graminis C4D1M]
          Length = 360

 Score =  232 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 181/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN       +  N+ + + L RE   L   +      +  + D     EL
Sbjct: 9   LDQLTTRLAELNDLLSREDITSNLDQYRKLTREHAELGPVVEQYALWRQAMHDAATAQEL 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +       +E      +R++      Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 69  LTDISMREFAEEEIRAARERMEQLGGELQKMLLPKDPNDDRNIFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE+ +++ E +   + +  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQHKNK +A  +L A++ +   Q  E+ A    + K+ IG G    +
Sbjct: 249 LPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QSHEQQAKEAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++DGDLD+ + A ++  +
Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELISALVSEHQ 349


>gi|73542728|ref|YP_297248.1| peptide chain release factor 1 [Ralstonia eutropha JMP134]
 gi|119361585|sp|Q46WS9|RF1_RALEJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|72120141|gb|AAZ62404.1| bacterial peptide chain release factor 1 (bRF-1) [Ralstonia
           eutropha JMP134]
          Length = 360

 Score =  232 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 176/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  +N          N+ + + L RE   L          +    D      L
Sbjct: 9   LDQLAERLEEVNALLAREDATANIDQYRKLSREHAELSPVAEQYGFYRQAQDDLATAQAL 68

Query: 76  ALEEDDCSILQETS-DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +      +      +R++      Q   L     D  +  LE+ AG GG ES  +A
Sbjct: 69  LDDPEMKDFAADEIASARERLESLEGSLQKLLLPKDPNDDRNLILEIRAGTGGEESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+++++ E +   + +  G K   + I G  A+  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYTRFAERQRWQVEIMSESESDLGGYKEVIVRIAGDAAFSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  ++EI+ SD RIDT+RASGAGGQHVN TDSAVR+TH
Sbjct: 189 ATEAQGRIHTSACTVAVMPEADEVGDVEINPSDLRIDTFRASGAGGQHVNKTDSAVRLTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A++ + ++  R   A    + +  IG G    +
Sbjct: 249 LPTGIVVECQDDRSQHRNKDKAMKVLAARIKDQQM--RAAQAKEASTRRNLIGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       ++DGDL++ + A  A  +
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKIDMIMDGDLEELVSALAAEHQ 349


>gi|300313560|ref|YP_003777652.1| peptide chain release factor 1 [Herbaspirillum seropedicae SmR1]
 gi|300076345|gb|ADJ65744.1| peptide chain release factor 1 (RF-1) protein [Herbaspirillum
           seropedicae SmR1]
          Length = 359

 Score =  232 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 125/344 (36%), Positives = 185/344 (53%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  LN+         ++   + + RE   L   ++   E      D     EL
Sbjct: 9   LDQLAERLEELNSLLAQEDATASMDNFRKMTREHAELGPLVALYHEYVQAAEDIRTAQEL 68

Query: 76  ALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  +  QE  D    R++      Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 69  LADPDMKAFAQEEIDGAKARMEGLELDLQKMLLPKDPNDERNIFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+++++ E +   + E  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYTRYAERQRWQVEIVSASESELGGYKEVIARIVGLGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  ++EI+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 ATETQGRIHTSACTVAVMPEADEVGDVEINPADIRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQHKNKAQA  +L A++ +++L  R++ +    + K+ IG G    +
Sbjct: 249 LPTGIVVECQDDRSQHKNKAQAMKVLAARIKDVQL--RQQQSEEAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++DGDLD+   A +   +
Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYKLDFIMDGDLDELTNALITEHQ 349


>gi|291617195|ref|YP_003519937.1| PrfA [Pantoea ananatis LMG 20103]
 gi|291152225|gb|ADD76809.1| PrfA [Pantoea ananatis LMG 20103]
 gi|327393650|dbj|BAK11072.1| peptide chain release factor 1 PrfA [Pantoea ananatis AJ13355]
          Length = 360

 Score =  232 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 115/337 (34%), Positives = 178/337 (52%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     ++ Q    D      L
Sbjct: 9   LEALQERHEEVEAMLGDAGVIADQDRFRALSREYAQLTDVTRCFRDWQQNQDDIETAKML 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE      ++ +   +  Q   L     D  D ++EV AG GG E+  +A
Sbjct: 69  LDDPEMRDMAQEELLEAREKSESLEQQLQLLLLPKDPDDERDCFVEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +  ++GE  G K     + G  AYG  K E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESRRWRVEIVSANEGEHGGYKEVIARVMGEGAYGRFKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   EI+ SD +IDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVMPELPEAELPEINPSDLKIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR E      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRHE--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           IR+Y   P   V D R N+      + ++G LD  ++
Sbjct: 307 IRTYNF-PQGRVTDHRINLTIYRLDETMEGKLDSLIE 342


>gi|254253376|ref|ZP_04946694.1| Peptide chain release factor 1 [Burkholderia dolosa AUO158]
 gi|124895985|gb|EAY69865.1| Peptide chain release factor 1 [Burkholderia dolosa AUO158]
          Length = 360

 Score =  232 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 118/344 (34%), Positives = 181/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN      ++  ++ + + L RE   L   +      +    D     EL
Sbjct: 9   LDQLSTRLAELNELLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRSDETAAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +       ++   + +     +E   Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 69  LADPSMRDFAEDEIRSARDRMARLELELQKMLLPKDPNDDRNIFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYLRFAERQRWQVEMMSESPSDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ +RSQHKNK +A  +L A++ +   Q  E+ A    + K+ IG G    +
Sbjct: 249 IPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++DGDLD+ + A ++  +
Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELIGALVSEHQ 349


>gi|203284000|ref|YP_002221740.1| peptide chain release factor RF-2 [Borrelia duttonii Ly]
 gi|201083443|gb|ACH93034.1| peptide chain release factor RF-2 [Borrelia duttonii Ly]
          Length = 347

 Score =  232 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 142/348 (40%), Positives = 211/348 (60%), Gaps = 4/348 (1%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +   GG FD D    +L     +  + + W +   A+ +++ +  L   I   + +  +L
Sbjct: 1   MKMSGGSFDSDKIKIQLQKYEKQINNENFWNDNKRAQEILKNQNILKTKIEPWENLICQL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   L       +          ++ +++ + ++    S    + D N A+L +H+GAG
Sbjct: 61  KDLREL---CKIAESEDDKALLERDVNKLREQYKHILTLSYFKEDIDINSAFLTIHSGAG 117

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTE+ DW NML R Y R++E+R +K E +++ + E  GIKS T+ IKG  AYG+LK E G
Sbjct: 118 GTEACDWVNMLYRTYLRYSERRGYKIELIDLLESE-GGIKSVTIEIKGKYAYGFLKSEVG 176

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVRISP+D+  +RHTSF+S+++ PV+DD IEI I   D R+DTYRASGAGGQHVN T
Sbjct: 177 IHRLVRISPFDAAKKRHTSFASVFIDPVIDDKIEIIIKPEDIRVDTYRASGAGGQHVNKT 236

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVRITH+ TG+V Q Q +RSQH+NK  A  +L++KLYE      ++ +   +  K +I
Sbjct: 237 SSAVRITHLKTGIVTQSQTDRSQHRNKELAMKVLKSKLYEHYKTLEQQKSKSKQQEKKDI 296

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            WG QIRSY+ QPY +VKD RT  E  +   V+DG++D+F++  L  K
Sbjct: 297 SWGNQIRSYIFQPYTLVKDHRTKFENPNIMSVMDGNIDNFIEEYLKWK 344


>gi|317504105|ref|ZP_07962107.1| peptide chain release factor RF2 [Prevotella salivae DSM 15606]
 gi|315664777|gb|EFV04442.1| peptide chain release factor RF2 [Prevotella salivae DSM 15606]
          Length = 376

 Score =  232 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 126/359 (35%), Positives = 206/359 (57%), Gaps = 12/359 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  + + L      D           +T+ P  W +   A+  M++ + ++  +      
Sbjct: 10  IIERTDALHRYLGIDQKKIEFEEEQLRTQAPDFWDDPKRAEAQMKKVKGIEKWLKGYNAC 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++   +  +  +     D+    +E   +  +    VE  + +++L  E D+ DA L+++
Sbjct: 70  RELADELQLAFDFYK--DNMVTEEEVDTDYAKAVKAVEDLELKNMLRQEEDAMDAVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PNAYGWL 181
           +GAGGTESQDWA ML+RMY RW+E   +  +  +I DG+EAGIKS T+ I+G   AYG+L
Sbjct: 128 SGAGGTESQDWAQMLMRMYQRWSESHGYNVKVTDIQDGDEAGIKSVTMTIEGGDYAYGYL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ
Sbjct: 188 KSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVYVDPAKVSWDTFRSSGAGGQ 247

Query: 242 HVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  +S VR+ +            ++++  + R Q KN+A+A  +L+++LY+  L+K++
Sbjct: 248 NVNKVESGVRLRYQYEDPDTGEQEEILIENTETRDQPKNRAKAMLLLKSQLYDRALKKKQ 307

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                 E+ K +I WG QIRSYV    + VKD RT  + +    V+DG LD F+KA L 
Sbjct: 308 AEQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTGFQTSDVDAVMDGKLDGFIKAYLM 365


>gi|330997843|ref|ZP_08321678.1| putative peptide chain release factor 2 [Paraprevotella xylaniphila
           YIT 11841]
 gi|329569731|gb|EGG51496.1| putative peptide chain release factor 2 [Paraprevotella xylaniphila
           YIT 11841]
          Length = 370

 Score =  232 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 129/358 (36%), Positives = 204/358 (56%), Gaps = 11/358 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D +N   ++     +T+ P  W +   A+  M++ + L   I   KE+
Sbjct: 10  IKTRTEALYRYLDIENKKIQVEEEQLRTQAPGFWDDAKAAEEQMKKVKGLQKWIDGYKEV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +     ++    +E      R    +E  +  ++L  E D  DA L+++
Sbjct: 70  KTLCDELELAFDFYK--EEMVTEEEVDGLYSRTVDALEDLELRNMLRQEEDPMDAVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA+ML+RMY RWAE   +K       DG+EAGIK+ T+ I+G  AYG+LK
Sbjct: 128 SGAGGTESQDWASMLMRMYMRWAESHGYKCTISNYQDGDEAGIKTVTMQIEGEFAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+ +  S    D +R+ GAGGQ+
Sbjct: 188 SENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVYVDPSRVSWDLFRSGGAGGQN 247

Query: 243 VNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  ++ VR+ +            ++++  + R Q +N+  A  +L+++LY+  LQKR+ 
Sbjct: 248 VNKVETGVRLRYQYKDPDTGEEEEILIENTESRKQLENRENAMRLLKSQLYDRALQKRKA 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG LD F+K+ L 
Sbjct: 308 KQAEIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGKLDGFIKSYLM 364


>gi|311111708|ref|YP_003982930.1| peptide chain release factor RF2 [Rothia dentocariosa ATCC 17931]
 gi|310943202|gb|ADP39496.1| peptide chain release factor RF2 [Rothia dentocariosa ATCC 17931]
          Length = 375

 Score =  232 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 138/361 (38%), Positives = 213/361 (59%), Gaps = 11/361 (3%)

Query: 4   SRQLNCLGGLF-------DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           S ++  L  ++       D +     L  L+ +   P LW +   A+ +     H    +
Sbjct: 7   SAEIKDLRSIYASIVAVSDLEGIKCALEDLSQQASAPELWDDPEHAQRVTSALSHKQAEL 66

Query: 57  SFIKEIQDRLCDNLILLELALEEDDCSILQ---ETSDNLQRIKLEVEYKQFESLLSGEAD 113
           + +  +  R+ D  +++ELA  ED+ S      E     + ++ +++  +   LLSGE D
Sbjct: 67  NRLTNLASRIDDVEVMVELAQTEDESSAEDLLAEAEAECKELRKKLDELEVLVLLSGEYD 126

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
             +A + + +GAGG ++ D+A MLLRMY RWAEK  + T+ L+    EEAG+KS T  + 
Sbjct: 127 QREAVVTIRSGAGGVDAADFAEMLLRMYLRWAEKNGYPTKVLDTSYAEEAGLKSVTFEVN 186

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
            P A+G L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  +EI ES+ ++D +
Sbjct: 187 APYAFGRLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDALEIPESEIKVDVF 246

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R+SG GGQ VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L  ++ +
Sbjct: 247 RSSGPGGQSVNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLMLRQEQED 306

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
                      +  WG Q+RSYVL PYQMVKDLRT  E+ + S VLDG L+ F++  +  
Sbjct: 307 AKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYEEGNTSSVLDGGLNRFIEEGIRW 365

Query: 354 K 354
           +
Sbjct: 366 R 366


>gi|163803585|ref|ZP_02197452.1| peptide chain release factor 1 [Vibrio sp. AND4]
 gi|159172627|gb|EDP57484.1| peptide chain release factor 1 [Vibrio sp. AND4]
          Length = 362

 Score =  232 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 116/339 (34%), Positives = 180/339 (53%), Gaps = 9/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  N  + + L +E   L+      +  Q    D     ++
Sbjct: 9   LETLVERYEEVQHLLGDPDVIGNQDKFRALSKEYSQLEEVTQCFQAYQQAQDDLAAAEDM 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           A E+D+        +       I+   +  Q   L     D  + +LE+ AGAGG E+  
Sbjct: 69  ANEDDEEMREMAQEEIKEAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AEKR ++ E +  ++ E  G K     + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSKYAEKRGWRIEVMSSNESEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RI
Sbjct: 189 VPATESQGRVHTSACTLAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E ++R     + ++ +  +G G   
Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAE--VSDTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +IR+Y   P   V D R N+     ++V++GDL   + 
Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTLYRLNEVMEGDLQSLID 344


>gi|221201722|ref|ZP_03574760.1| peptide chain release factor 1 [Burkholderia multivorans CGD2M]
 gi|221207203|ref|ZP_03580213.1| peptide chain release factor 1 [Burkholderia multivorans CGD2]
 gi|221213331|ref|ZP_03586306.1| peptide chain release factor 1 [Burkholderia multivorans CGD1]
 gi|221166783|gb|EED99254.1| peptide chain release factor 1 [Burkholderia multivorans CGD1]
 gi|221172791|gb|EEE05228.1| peptide chain release factor 1 [Burkholderia multivorans CGD2]
 gi|221178538|gb|EEE10947.1| peptide chain release factor 1 [Burkholderia multivorans CGD2M]
          Length = 360

 Score =  232 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 176/346 (50%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72
            D    RL+ LN      ++  ++ + + L RE   L   +      +    D      L
Sbjct: 9   LDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRSDETAAQEL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L      D       ++            K          D  + ++E+ AG GG ES  
Sbjct: 69  LADPSMRDFAEEEIRSARERMARLEVELQKMLL--PKDPNDDRNIFVEIRAGTGGDESAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R
Sbjct: 127 FAGDLLRMYLRFAERQRWQVEMMSESPSDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ +RSQHKNK +A  +L A++ +   Q  E+ A    + K+ IG G   
Sbjct: 247 THLPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N+       ++DGDLD+ + A ++  +
Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELIGALVSEHQ 349


>gi|291166475|gb|EFE28521.1| peptide chain release factor 1 [Filifactor alocis ATCC 35896]
          Length = 354

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 113/351 (32%), Positives = 182/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD      ++   LN    DP    ++ + K  M+E    +  I   +E +    D   
Sbjct: 1   MFDNLKALEEKYEELNKIVADPSTMNDMDKWKAYMKEISDTEPIIQKYREFKQTRDDIEG 60

Query: 72  LLELALEEDDCSILQETSDNLQR----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             ++  EE D  + +     L      ++      +   +     D  +  +E+  GAGG
Sbjct: 61  SKQILEEEKDEELRELAKMELSEKEELMEKVQNELKLLLIPKDPNDEKNVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A +L RMY+ +A  R +K E +  ++    G K    +I G  AY  LK E GV
Sbjct: 121 DEAALFAGVLFRMYSMYASARNWKVEMMSANETGIGGYKEVVFMITGKGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS S++ V P   D +E+E+  +D R+D +R+SG GGQ VNTTD
Sbjct: 181 HRVQRVPETESSGRIHTSTSTVAVLP-EVDDVEVELDMNDVRVDVFRSSGNGGQSVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ KNK +A+ +L+AKLY+LEL+K      + +  K+++G
Sbjct: 240 SAVRLTHKPTGIVISMQDEKSQLKNKEKAFKILKAKLYDLELEK--AQKELAQERKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +      + L+GD+D+ + A +   +
Sbjct: 298 SGDRSERIRTYNY-PQGRVTDHRIGLTLYKLENFLNGDIDEILDALITTDQ 347


>gi|73666975|ref|YP_302991.1| peptide chain release factor 2 [Ehrlichia canis str. Jake]
 gi|72394116|gb|AAZ68393.1| bacterial peptide chain release factor 2 (bRF-2) [Ehrlichia canis
           str. Jake]
          Length = 335

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 166/333 (49%), Positives = 227/333 (68%), Gaps = 2/333 (0%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           L  LN +     LW +   A+ ++ ER  +   I+   E+++       LL++    D  
Sbjct: 2   LVDLNVQCSSTSLWTDNALAQNILSERARVSKIITSFTELEEEFNYYTELLDVVKN-DTD 60

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
            +L +    L ++K  ++ K+ E L S EAD ND ++E+ +GAGGTES DW+ MLLRMY 
Sbjct: 61  ELLNDIEIGLTKLKERIQKKEVECLFSNEADQNDCFIEIQSGAGGTESNDWSCMLLRMYV 120

Query: 143 RWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
           RWAE    F TE +   DGEE GIKSAT+ + G NAYGW K E G+HRLVRISP++SN++
Sbjct: 121 RWAEIYHNFTTEIVYKLDGEEVGIKSATIKVTGDNAYGWSKTESGIHRLVRISPFNSNAK 180

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           RHT+FSSI V P+ D++I IE  + D RIDTYRASGAGGQHVN T+SAVRITHIP+G+VV
Sbjct: 181 RHTTFSSILVSPITDENINIETLDKDLRIDTYRASGAGGQHVNKTESAVRITHIPSGIVV 240

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
           QCQ  RSQH+N A+A N+L+++LY+L+LQ++E+      + +  IGWG QIRSY++ PYQ
Sbjct: 241 QCQNNRSQHQNLAEAHNLLKSRLYQLKLQEKEKKMAEEHNKRCNIGWGNQIRSYIMHPYQ 300

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           MVKD+RT  E  + + VLDG+LD F+ + L  K
Sbjct: 301 MVKDVRTGHEIGNVNSVLDGNLDPFIISALTAK 333


>gi|254491165|ref|ZP_05104346.1| peptide chain release factor 1 [Methylophaga thiooxidans DMS010]
 gi|224463678|gb|EEF79946.1| peptide chain release factor 1 [Methylophaga thiooxydans DMS010]
          Length = 362

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 112/342 (32%), Positives = 185/342 (54%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ V R   +     DP    +  + + L +E   L+  +S     +  L        +
Sbjct: 9   LESLVDRHEEIAGLLADPDTMADQNKFRTLSQEYAQLEPVVSNFTAYRHTLSAIEDANLM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL---LSGEADSNDAYLEVHAGAGGTESQD 132
             E+D         +  Q  + + E +             D  + +LE+ AG GG E+  
Sbjct: 69  LEEDDAEMREMAREELNQAEQTQEELELSLQKLLLPKDPNDQRNIFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+++AE R++K E +   +GE  G K     I G  AY  LK E G HR+ R
Sbjct: 129 FSGDLFRMYSKYAEVRRWKVEVINAQEGEHGGYKEMICRIVGEGAYSRLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ + P VD+   ++I+ +D R+DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVAILPEVDEIDAVDINPADIRVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ+ERSQHKN+A+A ++L++++   ++QK+E      E+ K+ +G G   
Sbjct: 249 THLPTGIVVECQEERSQHKNRAKAMSVLQSRIMAEQVQKQEAEQ--AETRKSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +IR+Y   P   + D R N+     +++++GDLD  ++  +
Sbjct: 307 ERIRTYNY-PQGRITDHRINLTLYKLNEIVEGDLDQVIEPLI 347


>gi|119945323|ref|YP_943003.1| peptide chain release factor 1 [Psychromonas ingrahamii 37]
 gi|166223592|sp|A1SV89|RF1_PSYIN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119863927|gb|ABM03404.1| bacterial peptide chain release factor 1 (bRF-1) [Psychromonas
           ingrahamii 37]
          Length = 363

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 112/346 (32%), Positives = 181/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP    +  + + L +E   L+  +   K+ Q    D  +   +
Sbjct: 9   LEVLVERYEEVQALLGDPGTISDQNKYRELTKEYAQLEVVVLSFKKYQSAQNDLAVAEMM 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           + ++D         +     + ++      Q   L     D  + YLE+ AGAGG E+  
Sbjct: 69  SDDDDPDMREMAKEEIKEAKKTVEKLAADLQILLLPKDPNDDRNCYLEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AE + ++ E +  +  E+ G K     I G  AYG +K E G HR+ R
Sbjct: 129 FAGNLFRMYSKYAESKGWRVEVMNSNASEQGGYKELIAKIDGEGAYGIMKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P V ++  I I+ +D ++DT+RASGAGGQHVN TDSAVR+
Sbjct: 189 VPETESQGRIHTSACTVVVMPEVPEAEAISINPADLKVDTFRASGAGGQHVNKTDSAVRL 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG VV+CQ +RSQHKN+AQA ++L+++L + E +K           ++ +  G   
Sbjct: 249 THLPTGTVVECQDQRSQHKNRAQAMSVLQSRLQQAEDEKSHAEEQTI--RRSLVASGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+     ++VL+GDL+   +  L   +
Sbjct: 307 ERIRTYNY-PQGRVSDHRINLTVYRLNEVLEGDLNALHEPILLEDQ 351


>gi|119775698|ref|YP_928438.1| peptide chain release factor 1 [Shewanella amazonensis SB2B]
 gi|166223600|sp|A1S8R2|RF1_SHEAM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119768198|gb|ABM00769.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
           amazonensis SB2B]
          Length = 363

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 115/339 (33%), Positives = 179/339 (52%), Gaps = 9/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     D  +  +    + L +E   L++ +   K  Q  + D     E+
Sbjct: 9   LEGLLERNEEVLALLSDASIISDQDRFRALSKEYAQLEDVVKGFKAYQQAVADLETAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRI---KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D         +        +      Q   L     D  +A++E+ AGAGG E+  
Sbjct: 69  LEEDDPELKEMAQEEIKSAKASLERLEAELQILLLPKDPNDEANAFVEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE ++++ E +  ++GE  G K       G   YG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAETQRWQVEIMSANEGEHGGYKEVIARFSGERVYGKLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   V ++  +EI+ S+ RIDT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRVHTSACTVAVLHEVPEAEAVEINPSELRIDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG VV+CQ ERSQHKNKA+A ++L A+L   E +KR   +    + +  +G G   
Sbjct: 249 THLPTGTVVECQDERSQHKNKARAMSVLVARLQAAEDEKRR--SAEATTRRNLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +IR+Y   P   V D R N+     ++V++GDL+  ++
Sbjct: 307 ERIRTYNF-PQGRVSDHRINLTLYRLNEVMEGDLNALIE 344


>gi|157376591|ref|YP_001475191.1| peptide chain release factor 1 [Shewanella sediminis HAW-EB3]
 gi|189039993|sp|A8FYZ0|RF1_SHESH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157318965|gb|ABV38063.1| peptide chain release factor 1 [Shewanella sediminis HAW-EB3]
          Length = 361

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 110/341 (32%), Positives = 185/341 (54%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     DP +  +    + L +E   L++ ++  K  Q    D     E+
Sbjct: 9   LEGLLERNEEVLALLSDPGVISDQERFRALSKEYSQLEDVVTSFKSFQQATEDLEAAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRI---KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           A ++D         +  +     +   +  Q   L     D N+ ++E+ AGAGG E+  
Sbjct: 69  ASDDDPELKEMAQEEMKEAKSLLEKLEDELQILLLPKDPNDDNNCFIEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++ E ++++ E +  ++GE  G K     + G   YG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSKYVESKRWQLEVMNTNEGEHGGFKEVIAKVSGEGVYGQLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P + +S  IEI++ D ++DT+RASGAGGQHVN TDSA+R+
Sbjct: 189 VPETESQGRVHTSACTVVVLPEIPESEAIEINKGDLKVDTFRASGAGGQHVNKTDSAIRL 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIP+G+VV+CQ +RSQHKN+AQA ++L A++  +E +KR        + +  +G G   
Sbjct: 249 THIPSGIVVECQDQRSQHKNRAQAMSVLTARIQAVEDEKRRSAEE--STRRNLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            +IR+Y   P   V + R N+     ++V++G+LD  ++  
Sbjct: 307 ERIRTYNF-PQGRVSEHRINLTLYRLNEVMEGELDAILEPL 346


>gi|319408605|emb|CBI82260.1| peptide chain release factor RF-2 [Bartonella schoenbuchensis R1]
          Length = 323

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 211/309 (68%), Positives = 255/309 (82%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ L+++I+ I+     L + + L+ +  EE D  I+ +  + ++++K E++ +Q +
Sbjct: 2   MRERQCLEDSINGIRLFTQTLEECIELIAMGEEESDEEIITDAENTIRKLKSEIDKRQID 61

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGEADSND YLE+HAGAGGTESQDWA+MLLRMY RWAE+ K K E LEIHDGEEAGI
Sbjct: 62  LLLSGEADSNDTYLEIHAGAGGTESQDWASMLLRMYIRWAEQHKMKVEVLEIHDGEEAGI 121

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+KG NAYG LK E GVHRLVRISP+DSN+RRHTSF+S+WVY VVDD+IEI+ISE
Sbjct: 122 KSATILVKGHNAYGMLKTESGVHRLVRISPFDSNARRHTSFASVWVYSVVDDNIEIDISE 181

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+LY
Sbjct: 182 SDIRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQVERSQHKNRATAWSMLRARLY 241

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KRE   N  E+SKTEIGWG QIRSYVLQPYQ+VKDLRT +E T P  VL+G+LD 
Sbjct: 242 EEELKKREAETNAIEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTDPQTVLNGNLDA 301

Query: 346 FMKATLAIK 354
           F++A LA +
Sbjct: 302 FIEAALAQR 310


>gi|307244007|ref|ZP_07526126.1| peptide chain release factor 1 [Peptostreptococcus stomatis DSM
           17678]
 gi|306492531|gb|EFM64565.1| peptide chain release factor 1 [Peptostreptococcus stomatis DSM
           17678]
          Length = 354

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 182/347 (52%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 +   L+ K  DP +  +    + LM+E   ++  +   +E            ++
Sbjct: 5   LKVLEDKYKELSQKVADPDIISDQPTWQKLMKETSEIEPIVMKYREYSKASQSIAESKQI 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  + +     L   +  +E  +       +     D  +  +E+  GAGG E+ 
Sbjct: 65  LEEESDEDLRELAKMELSESEALLEEYENELKILLVPKDPNDEKNVIIEIRGGAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE+R +KT  +  ++    G K  + +IKG  AY  LK E GVHR+ 
Sbjct: 125 LFAGDLFRMYSRYAERRGWKTSLMSSNETGVGGYKEVSFMIKGKGAYSRLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + +EI+I+  D R+D +RASG GGQ VNTTDSAVR
Sbjct: 185 RIPTTESGGRIHTSTATVAVLP-EVEDVEIDINPEDVRVDVFRASGNGGQCVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG VV CQ E+SQ KNK +A  +L+A+LY+  L +++   +I    K+++G G  
Sbjct: 244 LTHIPTGEVVSCQDEKSQLKNKEKAMKVLKARLYDKALAEQQ--KDIAAERKSQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R N+        +DGDLD+ + A + + +
Sbjct: 302 SERIRTYNF-PQGRVSDHRINLTLYKLDSFIDGDLDEMIDALITVDQ 347


>gi|209516553|ref|ZP_03265407.1| peptide chain release factor 1 [Burkholderia sp. H160]
 gi|209502994|gb|EEA02996.1| peptide chain release factor 1 [Burkholderia sp. H160]
          Length = 360

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 175/344 (50%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN       +  N+ + + L RE   L   +      +    D     EL
Sbjct: 9   LDQLTTRLAELNDLLSREDITANLDQYRKLTREHAELGPVVDQYGLWRQAQNDAATAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +       +E     +          Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 69  LTDASMRDFAEEEIRAARDRMETLGVELQKMLLPKDPNDDRNIFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE+ +++ E +   + +  G +   + I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYLRYAERNRWQVEMMSASESDLGGYREVIVRIAGDAAYSKLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQHKNK +A  +L A++ +   Q  E+      + K  IG G    +
Sbjct: 249 LPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QTHEQQTKEAATRKNLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++DGDLD+ + A ++  +
Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLDELIAALVSEHQ 349


>gi|54309994|ref|YP_131014.1| peptide chain release factor 1 [Photobacterium profundum SS9]
 gi|61214628|sp|Q6LNB4|RF1_PHOPR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|46914433|emb|CAG21212.1| putative peptide chain release factor A [Photobacterium profundum
           SS9]
          Length = 362

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 113/346 (32%), Positives = 183/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  +  + + L +E   L++     +       D     E+
Sbjct: 9   LETLVERYEEIQHLLGDPGIIGDQNKFRALSKEYSQLEDITQCFQAYLGAKDDLEAAEEM 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           A ++D         +   +   I    +  Q   +     D  + ++E+ AGAGG E+  
Sbjct: 69  AKDDDPEMREMAQEEVKESKANILRLEDELQVLLIPKDPNDDRNCFVEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE+R ++ E +  +  E+ G K     + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAERRGWRIEVINENRSEQGGYKEMIAKVSGDGAYGVLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P V ++   EI+  D +IDT+R+SGAGGQHVNTTDSA+RI
Sbjct: 189 VPATESQGRVHTSACTVAVMPEVPEAEIPEINTGDLKIDTFRSSGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR        + +  +G G   
Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLAARITKAEEEKRHAE--EASTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +     ++V++GD+D  ++  +   +
Sbjct: 307 DRIRTYNY-PQGRVSDHRITLTLYRLNEVMEGDMDSLIQPVIQEHQ 351


>gi|332298739|ref|YP_004440661.1| Peptide chain release factor 1 [Treponema brennaborense DSM 12168]
 gi|332181842|gb|AEE17530.1| Peptide chain release factor 1 [Treponema brennaborense DSM 12168]
          Length = 359

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 115/342 (33%), Positives = 178/342 (52%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R + LN   +DP L ++    K +MRE  HL   +    E ++ L        L
Sbjct: 5   LEELSKRYAELNDMIQDPELVRDPKRYKEIMREHSHLSQVMDSYAEYKEVLQGISEAQHL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EEDD  + +   + L+ ++  V   +       +     +  +  +E+  GAGG E+ 
Sbjct: 65  ITEEDDHDMKEMAREELKALESRVPEMESALKMLLIPPDPLEEKNIIMEIRGGAGGDEAS 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE + +K E ++  + E  G K  +  I G   YG L+ E GVHR+ 
Sbjct: 125 LFAADLFRMYTRYAEIKNWKYEIMDASETEVGGYKEISFSISGKFVYGSLRWEGGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  +++    I   D R+D  RA G GGQ VNTTDSAVR
Sbjct: 185 RVPETEAQGRIHTSAVTVAVLPEAEETEIE-IRPEDLRVDVMRAGGPGGQCVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q E+SQ KNKA+A  +LRA+L++LE  K++   +     K+ +G G  
Sbjct: 244 LTHLPTGLVVIQQDEKSQIKNKAKAMRVLRARLFDLEESKKQAERSAA--RKSMVGSGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   V D R N+        + G+LD+ + A 
Sbjct: 302 SERIRTYNF-PQNRVTDHRINLTLYKLDQFMQGNLDEMLDAL 342


>gi|313202185|ref|YP_004040843.1| peptide chain release factor 1 [Methylovorus sp. MP688]
 gi|312441501|gb|ADQ85607.1| peptide chain release factor 1 [Methylovorus sp. MP688]
          Length = 356

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 112/339 (33%), Positives = 172/339 (50%), Gaps = 7/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +RL  LN          ++   + + RE   +   +   +  +    D      +
Sbjct: 5   LATLSERLDELNRLLSSEDATSDMDNYRKISREHAEITPIVEQYRAYEQCENDLKEAHAM 64

Query: 76  ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +  +  QE  +  +   +      Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 65  LADPEMKAFAQEEIEAGKARLEEIAMALQKLLLPKDPNDERNIFLEIRAGTGGDESALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE++++K E +   + E  G K     I+G  AY  LK E G HR+ R+ 
Sbjct: 125 GDLFRMYSRYAERQRWKVEVVSASESEVGGYKEIIAKIEGFGAYSKLKFESGGHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P VD+  ++ I+ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 185 ETETQGRIHTSACTVAVLPEVDEVSDVTINPADIRIDTFRASGAGGQHINKTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            PTG+VV+CQ  RSQH NKAQA  +L A++     Q  E+ + I    ++ IG G    +
Sbjct: 245 FPTGIVVECQDGRSQHSNKAQAMQVLAARI--KAKQVNEQQSKIASERRSLIGSGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   + D R N+       + +GD+D+ + A 
Sbjct: 303 IRTYNY-PQGRITDHRINLTLYKIDAITEGDMDELINAL 340


>gi|188995885|ref|YP_001930137.1| peptide chain release factor 1 [Porphyromonas gingivalis ATCC
           33277]
 gi|188595565|dbj|BAG34540.1| peptide chain release factor 1 [Porphyromonas gingivalis ATCC
           33277]
          Length = 352

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 103/345 (29%), Positives = 175/345 (50%), Gaps = 11/345 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D    R   ++T   DP +  ++     L +E + L+   +  ++ ++ L +        
Sbjct: 2   DGLESRFEEISTLITDPAVIADMKRFTKLSKEYRDLEKIHTAGRDYRNLLANIEEAKHTM 61

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +E D  + +   + L      +   +       + +   D  +A +E+  G GG E+  
Sbjct: 62  AKESDEELREMAREMLAEANERLPILEEEIKMLLIPANPEDDKNAIVEIRGGTGGDEAAL 121

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY ++ E + ++ E  ++ +G   G K     +KG   YG LK E GVHR+ R
Sbjct: 122 FAGDLYRMYVKYCESKGWQVEVTDLSEGATGGYKEIVFSVKGEGVYGILKYESGVHRVQR 181

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P   + +++EI+ +D  + T R+ GAGGQ+VN  ++ V++
Sbjct: 182 VPATETQGRIHTSAATVAVLP-EAEEVDVEINPADIEMQTSRSGGAGGQNVNKVETKVQL 240

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311
           TH PTG+VV CQQ RSQ  N+  A  MLR+KLY++EL K  E   I    KT +  G + 
Sbjct: 241 THKPTGMVVVCQQARSQIANRELAMQMLRSKLYDIELSKHNE--AIAARRKTMVSTGDRS 298

Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             IR+Y   P   V D R N+   + S V+DG++  F+ A +  +
Sbjct: 299 AKIRTYNY-PQGRVTDHRINMTVYNLSAVMDGEVQPFIDALIIAE 342


>gi|71909299|ref|YP_286886.1| peptide chain release factor 1 [Dechloromonas aromatica RCB]
 gi|119361530|sp|Q479R5|RF1_DECAR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71848920|gb|AAZ48416.1| bacterial peptide chain release factor 1 (bRF-1) [Dechloromonas
           aromatica RCB]
          Length = 360

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 182/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V RL  ++     P    ++ + + L RER  ++  +      +    D      +
Sbjct: 9   LELLVDRLDEIDRMLSAPSTASDMDQFRKLSRERAEVEPVVVQFNAFRQAENDLAEAEAM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS-GEADSNDAYLEVHAGAGGTESQDWA 134
             + D     +E     +    E+E +  + LL     D     LE+ AG GG ES  +A
Sbjct: 69  LSDPDMREFAEEEMAAAKARLPELELELQKLLLPKDPNDERSVLLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE+++++ E +   + E  G +     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GSLFRMYSRFAERQRWQVEVMSASESELGGYREIICRIAGNGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P VD+  ++ ++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ETETQGRIHTSACTVAVMPEVDEVEDVNLNPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+V +CQ  RSQH NKA A  +L A++ ++  Q R + A+I  + K+ IG G    +
Sbjct: 249 LPTGIVAECQDGRSQHANKASALKVLAARIKDV--QVRAQQAHISSTRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+     + ++DGD+D+ + A  A  +
Sbjct: 307 IRTYNF-PQGRITDHRINLTLYKIAAIMDGDMDELLGALAAEHQ 349


>gi|291520820|emb|CBK79113.1| bacterial peptide chain release factor 1 (bRF-1) [Coprococcus catus
           GD/7]
          Length = 357

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 109/351 (31%), Positives = 185/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D+ + R   +  +  DP +  +    + LM+E+  L   +    E ++       
Sbjct: 1   MFDRLDDILIRYQQIMEELNDPDVVNDQKHFRKLMKEQSDLQPLVEKYTEYKNTKQTIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
            LE+   EDD  + +   + L   K  +   + E           D  +  +E+ AGAGG
Sbjct: 61  SLEMLEVEDDEEMKEMLKEELSEAKSNIAKIEQELKVLLIPKDPMDEKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+++AE +++K E +++ +    G K    ++ G + Y  +K E GV
Sbjct: 121 DEAALFAAELFRMYSKYAESKRWKIEMMDVSENGIGGFKECVFMVSGDHVYSRMKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ + P   + +++EI  +D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTVTVAIMP-EAEEVDVEIDMNDVRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LR+KL E+E++K+          K ++G
Sbjct: 240 SAVRLTHNPTGIVIYSQTEKSQLQNKEKAFRLLRSKLLEIEIEKKHAEEAAL--RKNQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P     + R  +      D+++GDLD+ + + +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRCTEHRIKLTLYRLGDIMNGDLDEIIDSLIAADQ 347


>gi|156973549|ref|YP_001444456.1| peptide chain release factor 1 [Vibrio harveyi ATCC BAA-1116]
 gi|166223617|sp|A7MY68|RF1_VIBHB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|156525143|gb|ABU70229.1| hypothetical protein VIBHAR_01250 [Vibrio harveyi ATCC BAA-1116]
          Length = 362

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 115/339 (33%), Positives = 179/339 (52%), Gaps = 9/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  N  + + L +E   L+      +  Q    D     ++
Sbjct: 9   LETLVERYEEVQHLLGDPDVIGNQDKFRALSKEYSQLEEVTKCFQAYQQAQDDLAAAEDM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           A E+D+        +  +  +         Q   L     D  + +LE+ AGAGG E+  
Sbjct: 69  ANEDDEEMREMAQEEIKEAKEAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AEKR ++ E +  ++ E  G K     + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RI
Sbjct: 189 VPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E ++R     + ++ +  +G G   
Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAE--VSDTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +IR+Y   P   V D R N+     ++V++GDL   + 
Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTIYRLNEVMEGDLQSLID 344


>gi|260890431|ref|ZP_05901694.1| peptide chain release factor 1 [Leptotrichia hofstadii F0254]
 gi|260860051|gb|EEX74551.1| peptide chain release factor 1 [Leptotrichia hofstadii F0254]
          Length = 360

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 125/351 (35%), Positives = 187/351 (53%), Gaps = 11/351 (3%)

Query: 13  LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL- 70
           +F   D+ V +   L     DP +  +  +     +    +D  +      ++R  +   
Sbjct: 1   MFQKLDDVVLKHKELTEMLMDPEVVSDPKKIMEYNKALNSIDEVVQKYTYYKNRKEEMES 60

Query: 71  ---ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
               L      E    +L+E     + I    E  +   L     D  +  +E+ AGAGG
Sbjct: 61  LKEDLKAEKDSEMKEMMLEEIHSIEEEIPQLEEELKILLLPKDPNDDKNVIMEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RM+TR+AE+ ++KTE ++  +    G+K  T LIKG  AY  LK E GV
Sbjct: 121 DEAALFAADIFRMFTRYAERNRWKTEIIDKSEIGVGGLKEVTFLIKGNGAYSRLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS  ++ V P +DD  E+EI+ SD +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPATESSGRVHTSTITVAVLPEIDDVSEVEINPSDLKIDTYRSSGAGGQHVNTTD 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VV  Q  RSQ KN+  A  +L +KLYE+E +K+          ++++G
Sbjct: 241 SAVRITHLPTGLVVTSQDGRSQIKNREAAMKVLASKLYEMEYEKQRSAVEN--ERRSQVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       VLDGDLD+ + A +A ++
Sbjct: 299 SGDRSEKIRTYNF-PQGRVTDHRIKLTLHRLEGVLDGDLDEMIDALIAYEQ 348


>gi|237752014|ref|ZP_04582494.1| peptide chain release factor 2 [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229376581|gb|EEO26672.1| peptide chain release factor 2 [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 367

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 165/349 (47%), Positives = 226/349 (64%), Gaps = 4/349 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +   +  +    +   R+  +    +    W++  +A  L +E++  +  +      
Sbjct: 13  LNIKCENIKKIMQPSSLKNRILEITELEQTKDFWEDAKKAGELQKEKKRCERQLEKYNNA 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L D + L EL+ ++ +   +          +  ++  + E +LS   DSN+A   + 
Sbjct: 73  KSALDDAIELFELSSDDLESLEVLFAESEEL--ESIIKNAEIEVMLSDPLDSNNAIFTIT 130

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+ML RMY RWAE++ FK E L+  +G+EAGIK A+ +IKG NAYG+ K
Sbjct: 131 PGAGGTESQDWASMLYRMYLRWAERKDFKVELLDYQEGDEAGIKDASFIIKGENAYGYAK 190

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+N++RHTSFSS+ V P +DD I IEI E D  IDTYRASGAGGQH
Sbjct: 191 AENGVHRLVRISPFDANAKRHTSFSSVQVSPEIDDEINIEIDEKDLEIDTYRASGAGGQH 250

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH P+G+VVQCQ +RSQHKNKA A  ML++KLYELE  KRE  +N   + 
Sbjct: 251 VNKTESAVRITHKPSGIVVQCQNDRSQHKNKASALKMLKSKLYELERLKREAESN--HTD 308

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K + GWG QIRSYVL PYQ VKDLR+N+  T+   +LDGD+D  ++  L
Sbjct: 309 KGDNGWGHQIRSYVLTPYQQVKDLRSNLAYTNVDAILDGDIDTILEGVL 357


>gi|83720975|ref|YP_443437.1| peptide chain release factor 1 [Burkholderia thailandensis E264]
 gi|167582488|ref|ZP_02375362.1| peptide chain release factor 1 [Burkholderia thailandensis TXDOH]
 gi|257137781|ref|ZP_05586043.1| peptide chain release factor 1 [Burkholderia thailandensis E264]
 gi|119361517|sp|Q2SUG2|RF1_BURTA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|83654800|gb|ABC38863.1| peptide chain release factor 1 [Burkholderia thailandensis E264]
          Length = 360

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 176/346 (50%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72
            D    RL+ LN      ++  ++ + + L RE   +   +    + +    D      L
Sbjct: 9   LDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQEL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L  A   D        +                       D  + ++E+ AG GG ES  
Sbjct: 69  LADASMRDFAEDELRGARERMSRLAAELQTMLL--PKDPNDERNIFVEIRAGTGGDESAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R
Sbjct: 127 FAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV+CQ +RSQHKNK +A  +L A++ +   Q  E+ A    + K+ IG G   
Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N+       ++DGDLD+ + A ++  +
Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVSEHQ 349


>gi|331006967|ref|ZP_08330210.1| Peptide chain release factor 1 [gamma proteobacterium IMCC1989]
 gi|330419229|gb|EGG93652.1| Peptide chain release factor 1 [gamma proteobacterium IMCC1989]
          Length = 360

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 112/351 (31%), Positives = 177/351 (50%), Gaps = 10/351 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +  D   +R   +     DP    +    + L RE   ++  ++   E +  L +  
Sbjct: 4   SILEKLDLLQERYVEVGALLSDPGTIADQNRFRELSREYAEIEPVVNCYNEYRKILDNLE 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN---DAYLEVHAGAGG 127
               L  + D         +     +     +     L    D N   + +LE+ AG GG
Sbjct: 64  EAQVLLKDSDPDMRAMGQEELKSAEEERAPLELELQKLLLPKDPNDDKNVFLEIRAGTGG 123

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  ++  L RMY+++AEKR+++ E +     E+ G K     I G   Y  LK E G 
Sbjct: 124 DEAAIFSGDLFRMYSKYAEKRRWQVEIVSESRSEQGGYKEVIARIVGQGVYSQLKFESGA 183

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ + P  D   E+ I+++D R+DT+RASGAGGQHVN TD
Sbjct: 184 HRVQRVPETESQGRVHTSACTVAIMPEADAQAEVAINKADLRVDTFRASGAGGQHVNKTD 243

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SA+R+THIPTGVVV+CQ ERSQHKN+A+A ++L A+L   +         + +  K  +G
Sbjct: 244 SAIRLTHIPTGVVVECQDERSQHKNRARAMSLLAARLQSAQDD--VAAKEMADERKNLVG 301

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R N+     ++V++GDLDD ++  +   +
Sbjct: 302 SGDRSERIRTYNF-PQGRVTDHRINLTLYRLNEVMEGDLDDVVQPLVNEHQ 351


>gi|297735238|emb|CBI17600.3| unnamed protein product [Vitis vinifera]
          Length = 451

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 135/355 (38%), Positives = 206/355 (58%), Gaps = 3/355 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S +   +          + L+ L  K  D   W +  +A+  +     + + I  + + 
Sbjct: 88  ISERAEEIRASAGLQQLEEELAALEMKAADSSFWDDRAKAQETLLALTDVKDKIKLLTDF 147

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSNDAYLE 120
           + ++ D   +++L  E D               +    ++  +   LLSG  D   A + 
Sbjct: 148 KTQVEDAETIVKLTEEMDSIDTGLLEEAANIIKELNKALDRFELTQLLSGPYDKEGAVIS 207

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + AGAGGT++QDWA+MLLRMY RW EK+++KT  +E   GEEAGIKSAT+ ++G  AYG+
Sbjct: 208 ITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSMGEEAGIKSATIELEGRYAYGY 267

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAG 239
           L GE+G HR+VR SP+++   R TSFS + V P+  ++S+++EI E D  I   RA G G
Sbjct: 268 LSGEKGTHRIVRQSPFNAKGLRQTSFSGVEVMPLLPEESMDVEIPEEDLEISFSRAGGKG 327

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ+VN  ++AVRITHIPTGV V+C +ERSQ  NK +A + L+AKL  +  ++R       
Sbjct: 328 GQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQI 387

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                +  WG+QIR+YV  PY++VKD+RT  E +  + V+DG+L+ F+KA L  K
Sbjct: 388 RGDAVKAEWGQQIRNYVFHPYKLVKDVRTGYETSDITSVMDGELEPFIKAYLKFK 442


>gi|269792432|ref|YP_003317336.1| peptide chain release factor 1 [Thermanaerovibrio acidaminovorans
           DSM 6589]
 gi|269100067|gb|ACZ19054.1| peptide chain release factor 1 [Thermanaerovibrio acidaminovorans
           DSM 6589]
          Length = 357

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 124/346 (35%), Positives = 185/346 (53%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
            +        + ++  DP +  NV E + L R    L   +   +E +     L +   L
Sbjct: 7   LEEIESAFQDIESRMADPEISNNVQEMQSLSRRHSELYPVVQAFREYRKVMRSLEEAQEL 66

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           LE   EE      +E       +    +  +   L     D  +  +E+ AGAGG E+  
Sbjct: 67  LEQDDEEMRQLAKEEVQRLSDMLPGLEQDLKVLLLPRDPNDHKNVIIEIRAGAGGDEAAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMYTR+ E++ ++ E +E+++    G K    L+KG  AY  LK E GVHR+ R
Sbjct: 127 FAADLFRMYTRYTERQGWRYEIMEMNETGIGGYKEVVFLVKGEGAYSKLKFESGVHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           I   +++ R HTS +++ V P   + ++++I   D +IDTYRASGAGGQ+VN TDSAVRI
Sbjct: 187 IPVTEASGRIHTSTATVAVLP-EAEDVDVQIRPEDLKIDTYRASGAGGQYVNMTDSAVRI 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV CQ ERSQ KN+A+A  +LRA+LY+ ELQK++  A +    K ++G G   
Sbjct: 246 THIPTGLVVTCQDERSQLKNRAKAMQLLRARLYDQELQKQQ--AQMAAERKGQVGTGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R          VLDGDL + ++A     +
Sbjct: 304 ERIRTYNY-PQNRLTDHRIGFTLYKLDQVLDGDLYELIEALRVADQ 348


>gi|317486540|ref|ZP_07945363.1| peptide chain release factor 1 [Bilophila wadsworthia 3_1_6]
 gi|316922215|gb|EFV43478.1| peptide chain release factor 1 [Bilophila wadsworthia 3_1_6]
          Length = 356

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 109/345 (31%), Positives = 179/345 (51%), Gaps = 11/345 (3%)

Query: 13  LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCD 68
           +F   ++  ++   L  +  DP ++ +    + L +    L   +      +E++  L D
Sbjct: 1   MFAKLESLERKFLDLEQELADPTVFNDQDRYRKLTKAHSDLKPVVDIFRQYRELKQNLAD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           N  LL  A  +      +E     +++       +   L +   D  +  LE+ AG GG 
Sbjct: 61  NQELLNDADPDIREMAHEEIKSIEEKLPELEHDLKVLLLPTDPLDEKNIILEIRAGTGGE 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +   L RMY R+AEK  +K E +   + +  G K    LI G   Y  LK E G H
Sbjct: 121 EAALFGGDLFRMYCRYAEKMGWKVEIMSQSESDNGGYKEVIALISGDKVYSRLKFESGTH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS +++ + P   + +++++   D R D YR+SG GGQ VNTTDS
Sbjct: 181 RVQRVPATESQGRIHTSAATVAIMP-EAEEVDLDLKPEDLRFDVYRSSGPGGQSVNTTDS 239

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+THIPTG+VV CQ E+SQHKNKA+   +L ++L  L++++ E+ A + +  + ++G 
Sbjct: 240 AVRVTHIPTGLVVCCQDEKSQHKNKAKGLKILCSRL--LQMKQDEQNAALADQRRAQVGT 297

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G    +IR+Y   P   V D R N+   S   VL+G++ + + A 
Sbjct: 298 GDRSERIRTYNF-PQGRVTDHRINLTLYSLGKVLEGEIQELVDAL 341


>gi|225430898|ref|XP_002276037.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 454

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 135/355 (38%), Positives = 206/355 (58%), Gaps = 3/355 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S +   +          + L+ L  K  D   W +  +A+  +     + + I  + + 
Sbjct: 91  ISERAEEIRASAGLQQLEEELAALEMKAADSSFWDDRAKAQETLLALTDVKDKIKLLTDF 150

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSNDAYLE 120
           + ++ D   +++L  E D               +    ++  +   LLSG  D   A + 
Sbjct: 151 KTQVEDAETIVKLTEEMDSIDTGLLEEAANIIKELNKALDRFELTQLLSGPYDKEGAVIS 210

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + AGAGGT++QDWA+MLLRMY RW EK+++KT  +E   GEEAGIKSAT+ ++G  AYG+
Sbjct: 211 ITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSMGEEAGIKSATIELEGRYAYGY 270

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAG 239
           L GE+G HR+VR SP+++   R TSFS + V P+  ++S+++EI E D  I   RA G G
Sbjct: 271 LSGEKGTHRIVRQSPFNAKGLRQTSFSGVEVMPLLPEESMDVEIPEEDLEISFSRAGGKG 330

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ+VN  ++AVRITHIPTGV V+C +ERSQ  NK +A + L+AKL  +  ++R       
Sbjct: 331 GQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQI 390

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                +  WG+QIR+YV  PY++VKD+RT  E +  + V+DG+L+ F+KA L  K
Sbjct: 391 RGDAVKAEWGQQIRNYVFHPYKLVKDVRTGYETSDITSVMDGELEPFIKAYLKFK 445


>gi|300741817|ref|ZP_07071838.1| peptide chain release factor 2 [Rothia dentocariosa M567]
 gi|300381002|gb|EFJ77564.1| peptide chain release factor 2 [Rothia dentocariosa M567]
          Length = 375

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 138/361 (38%), Positives = 213/361 (59%), Gaps = 11/361 (3%)

Query: 4   SRQLNCLGGLF-------DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           S ++  L  ++       D +     L  L+ +   P LW +   A+ +     H    +
Sbjct: 7   SAEIKDLRSIYASIVAVSDLEGIKCALEDLSQQASAPELWDDPEHAQRVTSALSHKQAEL 66

Query: 57  SFIKEIQDRLCDNLILLELALEEDDCSILQ---ETSDNLQRIKLEVEYKQFESLLSGEAD 113
           + +  +  R+ D  +++ELA  ED+ S      E     + ++ +++  +   LLSGE D
Sbjct: 67  NRLTNLASRIDDVEVMVELAQTEDESSKEDLLAEAEAECKELRKKLDELEVLVLLSGEYD 126

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
             +A + + +GAGG ++ D+A MLLRMY RWAEK  + T+ L+    EEAG+KS T  + 
Sbjct: 127 QREAVVTIRSGAGGVDAADFAEMLLRMYLRWAEKNGYPTKVLDTSYAEEAGLKSVTFEVN 186

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
            P A+G L  E G HRLVRISP+D+  RR TSF+++ V P+++ +  +EI ES+ ++D +
Sbjct: 187 APYAFGRLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLIEQTDALEIPESEIKVDVF 246

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R+SG GGQ VNTTDSAVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L  ++ +
Sbjct: 247 RSSGPGGQSVNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLMLRQEQED 306

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
                      +  WG Q+RSYVL PYQMVKDLRT  E+ + S VLDG L+ F++  +  
Sbjct: 307 AKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYEEGNTSSVLDGGLNRFIEEGIRW 365

Query: 354 K 354
           +
Sbjct: 366 R 366


>gi|114567903|ref|YP_755057.1| peptide chain release factor 1 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|119361631|sp|Q0AUB8|RF1_SYNWW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|114338838|gb|ABI69686.1| bacterial peptide chain release factor 1 (bRF-1) [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
          Length = 355

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 115/347 (33%), Positives = 182/347 (52%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+  ++   L      P +  +    + L +    L + ++  +E +          E+
Sbjct: 5   LDSLEEKYDELTHLLSQPEVLSDQARFQKLAKAHSALSDIVTMYREYKSLSRQLEDSKEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
            +EE+D    Q  +D + +++ +    +       L     D     +E+ AG GG E+ 
Sbjct: 65  LVEEEDEEFRQMLADEIPQLQEKKASLEQELRILLLPQDPNDEKSVIMEIRAGTGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE++ +K E ++ H  +  GIK    ++ G  AY  LK E GVHR+ 
Sbjct: 125 LFAGDLFRMYSRYAEEQGWKIEIMDTHYTDIGGIKEIVFVVDGRGAYSKLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + +E+ I  +D RID Y +SG GGQ VNTT SAVR
Sbjct: 185 RIPVTESGGRIHTSAATVAVLP-EAEEVEVAIDPNDLRIDVYCSSGPGGQSVNTTQSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG VV CQ E+SQHKNKA+A  +LRA+L EL  +++     +  + K ++G G  
Sbjct: 244 ITHVPTGEVVTCQDEKSQHKNKAKALRVLRARLKELLEEEKNAE--MAGTRKNQVGSGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R N+       VL+G L++ + A +A  +
Sbjct: 302 SERIRTYNF-PQGRVSDHRINLTLHRLESVLEGRLEEIINALIAHYQ 347


>gi|317121004|ref|YP_004101007.1| bacterial peptide chain release factor 1 (bRF-1) [Thermaerobacter
           marianensis DSM 12885]
 gi|315590984|gb|ADU50280.1| bacterial peptide chain release factor 1 (bRF-1) [Thermaerobacter
           marianensis DSM 12885]
          Length = 381

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 181/346 (52%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               + R   L  +  DP +  +    + L +ER  L+  +   +  ++   D      L
Sbjct: 30  LAARIGRFDQLERELADPAVAADPRRWQPLAQERAELEPLVDAYRRWREAGADLEAARAL 89

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQF----ESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E DD       +  ++R++ E +  +       L     D  D  +E+ AG GG E+ 
Sbjct: 90  LRETDDADEHAYLTAEVERLEAERQRLERTLRSLLLPRDPRDQRDVIMEIRAGTGGEEAA 149

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE++ ++TE +   + +  G K     + G  A+  LK E GVHR+ 
Sbjct: 150 LFAGDLFRMYQRYAERQGWRTEVMAATESDLGGFKEVVFAVSGRGAFSRLKHESGVHRVQ 209

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + +E++I   D  IDT+ ASG GGQHVN T+SAVR
Sbjct: 210 RVPVTEAAGRIHTSTATVAVLP-EAEEVEVQIDPDDLEIDTFAASGPGGQHVNKTESAVR 268

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH PTG+VV CQ ERSQHKN+A+A  +LRA+L +   ++++E   + +  ++++G G +
Sbjct: 269 ITHKPTGIVVTCQDERSQHKNRARAMKILRARLLDYYTRRQQEE--LSQQRRSQVGTGER 326

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              IR+Y  +    V D R  +      +++DGDLD+ + A  A  
Sbjct: 327 SEKIRTYNFR-ENRVTDHRIGLTLYRLQEIMDGDLDELLDALAAHD 371


>gi|242239290|ref|YP_002987471.1| peptide chain release factor 1 [Dickeya dadantii Ech703]
 gi|242131347|gb|ACS85649.1| peptide chain release factor 1 [Dickeya dadantii Ech703]
          Length = 361

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 117/337 (34%), Positives = 179/337 (53%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     DP +  ++   +ML RE   L +     +  Q    D      L
Sbjct: 9   LEALQERHEEVQALLGDPSIISDMDRFRMLSREYAQLTDITRCFQRWQQAQDDIATAEML 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+     +     +E + +   L     D    +LE+ AG GG E+  +A
Sbjct: 69  LDDPEMREMAQDELKEAREAGDTLEQQLKVLLLPRDPDDERGCFLEIRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   DGE  G K     + G  AYG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESRRWRVEMVSASDGEHGGYKEVIAKVIGEGAYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P V ++   +I+  D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEVPEAELPDINPVDLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLAARIRAAEMQKRQQE--EASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           IR+Y   P   V D R N+      + ++G LD  ++
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEAIEGKLDMLIQ 342


>gi|255547508|ref|XP_002514811.1| peptide chain release factor, putative [Ricinus communis]
 gi|223545862|gb|EEF47365.1| peptide chain release factor, putative [Ricinus communis]
          Length = 458

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 135/354 (38%), Positives = 207/354 (58%), Gaps = 3/354 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           S ++  +          Q ++ L +K  +   W +   A+  +     + + I  + E +
Sbjct: 97  SERVEEIRTSAGLQQLEQEVTNLESKAANTSFWDDRATAQETLLALTDVKDKIKLLTEFK 156

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSNDAYLEV 121
            ++ D   +++L  E D          +    +    +E  +   LLSG  D   A + +
Sbjct: 157 TKVEDAETIVKLTEEMDSIDTGLLEEASSIIKELNKSLERFELTQLLSGPYDKESAVISI 216

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGT++QDWA+MLLRMY RW EK+++KT  +E   GEEAGIKSA + ++G  AYG+L
Sbjct: 217 TAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSAMIEVEGRYAYGYL 276

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGG 240
            GE+G HR+VR SP+++   R TSFS I V P+  ++S+++E+ E D  I   RA G GG
Sbjct: 277 SGEKGTHRIVRQSPFNAKGLRQTSFSGIEVMPLLPEESMDVELPEEDLEISFSRAGGKGG 336

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN  ++AVRITHIPTGV V+C +ERSQ  NK +A + L+AKL  + +++R        
Sbjct: 337 QNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAVEQRASEIKQIR 396

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               +  WG+QIR+YV  PY++VKD+RT  E +  + V+DG+L+ F+KA L  K
Sbjct: 397 GDAVKAEWGQQIRNYVFHPYKLVKDVRTGYETSDVTSVMDGELEAFIKAYLKYK 450


>gi|160940109|ref|ZP_02087454.1| hypothetical protein CLOBOL_04998 [Clostridium bolteae ATCC
           BAA-613]
 gi|158436689|gb|EDP14456.1| hypothetical protein CLOBOL_04998 [Clostridium bolteae ATCC
           BAA-613]
          Length = 358

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 116/351 (33%), Positives = 190/351 (54%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D+ +     L     DP + Q+      LM+E+  L   +   K+ +    D   
Sbjct: 1   MFDKLDDMLIHYEELMLMLGDPDVTQDTKRFTRLMKEQADLAPIVEAYKQYKQAKQDVED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
            L L  EE D  + +   + L   +  +E  + E           D  +  LE+ AGAGG
Sbjct: 61  SLALLEEESDEEMREMAKEELSDARKRIEDLEHELKILLLPKDPNDDKNIILEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+ +A+ +++K E + +++    G K    ++ G  AY  LK E GV
Sbjct: 121 DEAALFAAELYRMYSNYADSQRWKVEIVSLNENGIGGFKEVVAMVTGKGAYSKLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + ++++I  +DCRID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVMP-EAEEVDVQIDMNDCRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+V+  Q E+SQ +NK +A+ +LR+KLY++EL+KR+  ++  E  +++IG
Sbjct: 240 SAVRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDIELEKRQ--SSEAEERRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++GD+ + +   +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLYKIDSIMNGDIQELLDNLIAADQ 347


>gi|330828582|ref|YP_004391534.1| peptide chain release factor 2 [Aeromonas veronii B565]
 gi|328803718|gb|AEB48917.1| Peptide chain release factor 2 [Aeromonas veronii B565]
          Length = 300

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 155/297 (52%), Positives = 209/297 (70%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  I  +   + D  +L+ LA+E +D     E     ++++ ++   +F  + SG+ D +
Sbjct: 2   VGTIDTLTQGVDDVEMLVSLAVEGEDEETFNEAIAESEQLEAKLVDLEFRRMFSGQHDGS 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           D Y+++ +G+GGTE+QDWANM+LRMY RW +   +K E +E  +G+ AGIKSAT+   G 
Sbjct: 62  DCYIDIQSGSGGTEAQDWANMVLRMYLRWGDAHGYKPELIECSEGDVAGIKSATIKFTGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+GWL+ E GVHRLVR SP+DS  RRHTSF S++VYP +DD I+IEI+ +D RID YRA
Sbjct: 122 YAFGWLRTETGVHRLVRKSPFDSGGRRHTSFCSVFVYPEIDDDIDIEINPADLRIDVYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN T+SAVRITH+PTGVVVQCQ +RSQHKNK Q    L+AKLYELE+QK+   
Sbjct: 182 SGAGGQHVNRTESAVRITHVPTGVVVQCQNDRSQHKNKDQCMKQLKAKLYELEIQKQNAE 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 242 KQALEETKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQSVLDGDLDKFIEASLK 297


>gi|312877708|ref|ZP_07737662.1| peptide chain release factor 2 [Caldicellulosiruptor lactoaceticus
           6A]
 gi|311795509|gb|EFR11884.1| peptide chain release factor 2 [Caldicellulosiruptor lactoaceticus
           6A]
          Length = 316

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 162/307 (52%), Positives = 216/307 (70%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M++ + L + I   +++  +  D  +L EL+L+E +  + +E    L  ++ ++E  + E
Sbjct: 1   MQKIKRLKDKIERFQKLYSQWEDLKVLTELSLDEGNHEMAEELEKELLDLERKIEDFKIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LL+G  D N+A L +HAGAGGTE+QDWA MLLRMYTRWA K+ +K E L+I  GEEAGI
Sbjct: 61  VLLNGPYDKNNAILSIHAGAGGTEAQDWAEMLLRMYTRWAVKKGYKVETLDILPGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T+ I G NAYG+LK E+GVHRLVRISP+D+  RRHTSF+++ V P V+D  +IEI E
Sbjct: 121 KNVTVRIVGENAYGYLKAEKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVEDDTDIEIKE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D  IDT+RASGAGGQHVN T+SAVRI HIPTG+VV CQ ERSQHKN+  A  +L+AKL 
Sbjct: 181 EDLEIDTFRASGAGGQHVNKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLL 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           EL+ ++R E     +  +TEIGWG QIRSYV  PY +VKD RT  E  +   V+DG++D 
Sbjct: 241 ELKEKERREKIQKLKGEQTEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDV 300

Query: 346 FMKATLA 352
           F+ A L 
Sbjct: 301 FINAYLK 307


>gi|23100453|ref|NP_693920.1| peptide chain release factor RF-1 [Oceanobacillus iheyensis HTE831]
 gi|32171555|sp|Q8EM60|RF1_OCEIH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|22778686|dbj|BAC14954.1| peptide chain release factor RF-1 [Oceanobacillus iheyensis HTE831]
          Length = 356

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 104/351 (29%), Positives = 180/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68
           + D   +   R + LN    DP +  +  + +   +E+  L++ +   +E +   ++L D
Sbjct: 1   MLDRLQSLEDRYNKLNEMLSDPEVINDSKKLREYSKEQSGLEDVVQAYREYKEVTEQLND 60

Query: 69  NLILLELALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              ++E  L+++   +++        R +      +   L     D  + ++E+   AGG
Sbjct: 61  AKEMMEDKLDDEMYEMVKAEIAELNGRKEELESSMKILLLPKDPNDDKNVFMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +K + +E       G K    +I G + Y  LK E G 
Sbjct: 121 DEAALFAGDLYRMYSRYAEHQGWKIDVMEASSTGVGGYKEVIFMINGSDVYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P  ++       + D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEAEEVEVEV-HDKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+VV  Q E+SQ KNK +A  +LRA++Y+    ++E  A   E+ K+ +G
Sbjct: 240 SAVRLTHVPTGIVVSIQDEKSQIKNKEKAMKVLRARIYDKF--QQEAQAEYDENRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       ++ G LD+F+ A +  ++
Sbjct: 298 SGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQIMQGKLDEFIDALVMEEQ 347


>gi|146329088|ref|YP_001209002.1| peptide chain release factor 1 [Dichelobacter nodosus VCS1703A]
 gi|146232558|gb|ABQ13536.1| peptide chain release factor 1 [Dichelobacter nodosus VCS1703A]
          Length = 365

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 113/333 (33%), Positives = 175/333 (52%), Gaps = 7/333 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             +R   LN    DP +  +    +   +E   L   +   +EI+    +   L EL  +
Sbjct: 15  ICERYEELNALLADPSVAADPDLLRRYGQEHAQLAPIVEIFQEIEHLQQEANDLKELEDD 74

Query: 79  EDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
            +    +        ++ +   +      +     D  + +LE+ AG GG E+  +A  L
Sbjct: 75  AEMAEYVAAEQSENLKKTEECEQKLARLMIPQDPLDEANIFLEIRAGTGGDEAAIFAGDL 134

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
           +RMY R+AE R ++   L  + GE  G +     + G   Y  LK E G HR+ R+   +
Sbjct: 135 MRMYARFAENRGWQISVLSENAGEFGGYREIICRVSGQRVYSTLKFESGAHRVQRVPETE 194

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           ++ R HTS +++ V P  D+  +IEI+ +D R+DT+RASGAGGQHVN TDSA+RITH+PT
Sbjct: 195 ASGRIHTSAATVAVLPESDEIEDIEINPADLRVDTFRASGAGGQHVNKTDSAIRITHLPT 254

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314
           G+VV+CQ+ERSQHKN+A+A   L AKL +   +++     I    K+ +G G    +IR+
Sbjct: 255 GIVVECQEERSQHKNRAKAMRWLYAKLMD--RERQAAEKEIAAERKSLVGTGDRSERIRT 312

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           Y   P   V D R N+   +  DVL+G LD  +
Sbjct: 313 YNY-PQGRVTDHRINLTLYALDDVLNGQLDLLV 344


>gi|224536533|ref|ZP_03677072.1| hypothetical protein BACCELL_01408 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521789|gb|EEF90894.1| hypothetical protein BACCELL_01408 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 371

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 130/358 (36%), Positives = 208/358 (58%), Gaps = 11/358 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D +    ++     +T+ P  W +   A+  M++ + L   I+   EI
Sbjct: 10  IKERTEALYRYLDIEGKKIQVEEEQLRTQAPGFWDDQKTAEAQMKKVKGLQQWIAGYNEI 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +     D+    +E  +   +  + ++  + +++L  EAD  D  L+++
Sbjct: 70  KTLSDELQLAFDFYK--DELVTEEEIDEAYAKASVAIDELELKNMLRDEADQMDCVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA+ML+RMY R+AE   +K     + +G+EAGIK+ T+ I G  AYG+LK
Sbjct: 128 SGAGGTESQDWASMLMRMYLRYAETNGYKAVISNLQEGDEAGIKTCTIEISGDYAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+ I+ ++   DT+R+SGAGGQ+
Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVNINVANISWDTFRSSGAGGQN 247

Query: 243 VNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  +S VR+ +            ++++  + R Q KN+  A   LR+ LY+ ELQ R  
Sbjct: 248 VNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMA 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L 
Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYLM 364


>gi|332978486|gb|EGK15198.1| peptide chain release factor RF1 [Psychrobacter sp. 1501(2011)]
          Length = 362

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 178/347 (51%), Gaps = 10/347 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   +     DP    +  + + L  E   L    S  +  +    D    LE+
Sbjct: 9   LDQMVDRFEEVTALLSDPGTISDNNKFRELSMEHSELSEITSLWQRYRQAETDKQDALEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQ 131
             E  D  +     + +     ++   + E     L     D   A+LE+ AG GG E+ 
Sbjct: 69  INEASDPEMKAMMQEEIDSAADDIAAMEEELNVMMLPKDPNDKVPAFLEIRAGTGGDEAA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY R+A  + +  E L  ++GE  G K     + G + YG LK E G HR+ 
Sbjct: 129 IFSGDLFRMYERYASSQGWTIEVLSANEGEHGGYKEIITRVSGNDVYGRLKFESGAHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V     +E++ +D R+DT+R+SGAGGQHVNTTDSAVR
Sbjct: 189 RVPETESQGRVHTSACTVAVMPEVKIDDTVELNPADIRMDTFRSSGAGGQHVNTTDSAVR 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTGVV +CQQERSQHKN+A+A  ML A++ + ++Q++ + A+     +  +G G  
Sbjct: 249 LTHIPTGVVAECQQERSQHKNRAKAMQMLIARIQQAKVQEQVDTADAL--RRNLVGSGDR 306

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R N+       +++GDLD+ + A     +
Sbjct: 307 SERIRTYNF-PQGRMTDHRINLTLYKLDAIMEGDLDELLDALTREHQ 352


>gi|255525833|ref|ZP_05392762.1| peptide chain release factor 1 [Clostridium carboxidivorans P7]
 gi|255510476|gb|EET86787.1| peptide chain release factor 1 [Clostridium carboxidivorans P7]
          Length = 358

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 114/347 (32%), Positives = 187/347 (53%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    +   L+ K  DP +  +  E + L +E   L+  +   ++ +    +     E+
Sbjct: 5   LEFIENKYEELSAKISDPSIMADQKEWQKLCKEHAELETLVIKYRQYRKAEEELESNKEM 64

Query: 76  ALEEDDCSILQETSDNLQRIK----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +E D  +     ++++ ++       +  +   L     D  + ++E+  GAGG E+ 
Sbjct: 65  LKDETDKDMRDMIQEDIKELEASMDEARQELRILLLPKDPNDDKNVFVEIRGGAGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE++ +K E + ++  +  G K    +IKG  AY  LK E GVHR+ 
Sbjct: 125 LFAANLTRMYTRYAERKGWKVETISLNATDIGGFKEIVFMIKGAGAYSRLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P   D +++ I+ +D RID +RASG GGQ VNTTDSAVR
Sbjct: 185 RVPDTESSGRIHTSTATVAVLP-EVDDVDLVINANDIRIDVFRASGHGGQCVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ E+SQ KNK +A  +L+++L+  E  + E  A I E  K+++G G  
Sbjct: 244 ITHLPTGLVVSCQDEKSQLKNKEKAMKVLKSRLF--ERAEAERSAGIAEDRKSQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +        LDGD+D+ + A +   +
Sbjct: 302 SERIRTYNY-PQGRVTDHRIGLTLYKLDSYLDGDIDEVIDALITTDQ 347


>gi|323143931|ref|ZP_08078589.1| peptide chain release factor 1 [Succinatimonas hippei YIT 12066]
 gi|322416295|gb|EFY06971.1| peptide chain release factor 1 [Succinatimonas hippei YIT 12066]
          Length = 364

 Score =  231 bits (588), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 107/347 (30%), Positives = 174/347 (50%), Gaps = 9/347 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   +      P +  +  + + L RE   L   ++  ++ +    D   +  +
Sbjct: 9   LESLCERHQEVEQLLSQPEIIADQEKFRELNREYSRLQVMVNTFQDYKRAADDLEEMQAM 68

Query: 76  ALEEDDCSILQETSDNLQRIKL---EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
              +D+        +     +         Q   L   + D  + +LE+ AG GG E+  
Sbjct: 69  LEGDDEDMKAMAQEELEPTKEKAAALEHELQLLLLPHDDRDDCNCFLEIRAGTGGDEAAL 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY ++ E + ++ E +   +GE  G K     + G  AYG++K E G HR+ R
Sbjct: 129 FAGELYRMYAKYCEAKGWQLEVVSQSEGEVGGYKEIIAKLSGEGAYGYMKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P +  S   E++ +D RIDT+RASGAGGQH+N TDSA+RI
Sbjct: 189 VPATEAQGRVHTSACTVMVLPEIPPSKAPEVNPADLRIDTFRASGAGGQHINKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQ 311
           THIPTG+VV+CQ ERSQH+N+ +A  +L ++L ++E  KR         S    G    +
Sbjct: 249 THIPTGIVVECQDERSQHRNRERAMEVLLSRLAKMEEDKRLAEQTEARHSILSSGDRSDR 308

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD----DFMKATLAIK 354
           IR+Y   P   V D R N+     S+VL+G+LD      ++   A +
Sbjct: 309 IRTYNF-PQSRVTDHRINLTLYRLSEVLEGNLDLILKPVIEEYQAEQ 354


>gi|284047800|ref|YP_003398139.1| peptide chain release factor 1 [Acidaminococcus fermentans DSM
           20731]
 gi|283952021|gb|ADB46824.1| peptide chain release factor 1 [Acidaminococcus fermentans DSM
           20731]
          Length = 358

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 108/354 (30%), Positives = 180/354 (50%), Gaps = 15/354 (4%)

Query: 13  LFD----WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           +F+      +   R   L  K  DP +     E     +    L   ++  +E +  +  
Sbjct: 1   MFENLDKLQDLEDRYLDLEAKISDPEVIARQEEWLKYTKAHAKLTEIVTVYREYKKLVDT 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAG 124
                 +    +D  +     + +Q ++  +E  +       L     D  +  +E+ AG
Sbjct: 61  WKDDEAIVKAREDQELTAMAEEEMQELQPRLEAYEEKLTLLLLPRDPNDEKNIIMEIRAG 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L RMYTR+AE++ +K E ++       G K    ++ G + Y  +K E
Sbjct: 121 AGGDEAALFAGDLFRMYTRYAEQKGWKVELMDSSPTGLGGFKEVVFMVSGTDVYSHMKFE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS  ++ V P     ++IE++ +D R+DTYRA GAGGQ+VN
Sbjct: 181 SGVHRVQRVPDTESQGRVHTSTVTVAVMP-EAQEVDIELNPADIRVDTYRAGGAGGQYVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T+SAVR+THIPTG+V QCQ E+SQ KN+ +   +LR+++ E E +K+   A      K+
Sbjct: 240 KTESAVRMTHIPTGIVAQCQDEKSQAKNREKCLRVLRSRILEAEQEKQR--AATAAERKS 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           ++G G    +IR+Y   P   V D R  +      D+++GDLD+ + A +  ++
Sbjct: 298 QVGTGDRSERIRTYNY-PQGRVTDHRIGLTLHKLPDIINGDLDELLDALMMAEQ 350


>gi|319404230|emb|CBI77823.1| peptide chain release factor RF-2 [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 317

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 214/309 (69%), Positives = 257/309 (83%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ+L+++++  +     L + + L+ +  EE+D  I+ E  + ++++K E++ KQ E
Sbjct: 2   MRERQNLEDSMNSTQLFTQMLEECIELIAMGEEENDVEIITEAENTIRQLKSEIDKKQIE 61

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEADSND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+ K K E LE HDGEEAGI
Sbjct: 62  TLLSGEADSNDTYLEVHAGAGGTESQDWASMLLRMYTRWAEQHKMKVEILETHDGEEAGI 121

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+KG NAYG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPVVD++IE+++SE
Sbjct: 122 KSATILVKGYNAYGLLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVVDENIEVDLSE 181

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKNKA AW+MLRA+LY
Sbjct: 182 SDVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNKATAWSMLRARLY 241

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE  N  E+ KTEIGWG QIRSYVLQPYQ+VKDLRT +E   P  VL+GDLD 
Sbjct: 242 EEELKKREEATNAVEAFKTEIGWGHQIRSYVLQPYQLVKDLRTGVENADPQTVLNGDLDT 301

Query: 346 FMKATLAIK 354
           F++A LA +
Sbjct: 302 FIEAALAQR 310


>gi|255319517|ref|ZP_05360731.1| peptide chain release factor 1 [Acinetobacter radioresistens SK82]
 gi|262378460|ref|ZP_06071617.1| peptide chain release factor 1 [Acinetobacter radioresistens SH164]
 gi|255303457|gb|EET82660.1| peptide chain release factor 1 [Acinetobacter radioresistens SK82]
 gi|262299745|gb|EEY87657.1| peptide chain release factor 1 [Acinetobacter radioresistens SH164]
          Length = 362

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 112/339 (33%), Positives = 172/339 (50%), Gaps = 7/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    + L RE   L        + +    D      +
Sbjct: 9   LDQLSDRYEELTALLADAEVISDNKRFRKLSREHSDLTEITEVWAKYRQAEADIETAEAM 68

Query: 76  ALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + QE     +  I+          +     D+N AYLE+ AG GG E+  ++
Sbjct: 69  LSDPDFKEMAQEEIRENRALIESLESQLNILMIPKDPNDANAAYLEIRAGTGGDEAAIFS 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+++AE   ++ E L  ++GE  G K     + G   YG +K E G HR+ R+ 
Sbjct: 129 GDLFRMYSKYAESCGWRLEILSENEGEHGGYKEIICRVDGDGVYGRMKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P VD    ++I+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRVHTSACTVAILPEVDVDTTVDINPADLRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG VV+CQ+ERSQHKNKA+A ++L ++L     ++  + +   E  +  +G G    +
Sbjct: 249 IPTGTVVECQEERSQHKNKAKAMSLLVSRLENA--KRAAQESATSEMRRDLVGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   + D R N+       +++GDL++ + + 
Sbjct: 307 IRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLNELLDSL 344


>gi|84394465|ref|ZP_00993179.1| peptide chain release factor 1 [Vibrio splendidus 12B01]
 gi|84374906|gb|EAP91839.1| peptide chain release factor 1 [Vibrio splendidus 12B01]
          Length = 362

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 121/346 (34%), Positives = 181/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  N  + + L +E   L+      K  Q    D     E+
Sbjct: 9   LETLVERYEEVQHLLGDPGVLGNQDKFRALSKEYSQLEEVTGCFKSYQQAQEDLEAAEEM 68

Query: 76  ALEEDDCSILQETS---DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           A E+D            D    I+   +  Q   +     D  + +LE+ AGAGG E+  
Sbjct: 69  ANEDDAEMREMAQEEIKDAKANIERLTDELQILLIPKDPNDERNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AEK+ ++ E +  +  E+ G K     I G   YG +K E G HR+ R
Sbjct: 129 FAGNLFRMYSRFAEKKGWRVEVMSSNVSEQGGFKEMIAKISGDAVYGTMKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P + ++   EI   D +IDT+RASGAGGQHVNTTDSA+RI
Sbjct: 189 VPETESQGRVHTSACTVAVMPEIPEADLPEIKAGDLKIDTFRASGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E ++R   A I ++ +  +G G   
Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERR--AAAISDTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+     ++VL+GD+   +   L   +
Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTIYRLNEVLEGDMQSLLDPVLQEHQ 351


>gi|332881782|ref|ZP_08449430.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332680421|gb|EGJ53370.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 370

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 129/358 (36%), Positives = 204/358 (56%), Gaps = 11/358 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D +N   ++     +T+ P  W +   A+  M++ + L   I   KE+
Sbjct: 10  VKTRTEALYRYLDIENKKIQVEEEQLRTQAPGFWDDAKAAEEQMKKVKGLQKWIDGYKEV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +     ++    +E      R    +E  +  ++L  E D  DA L+++
Sbjct: 70  KTLCDELELAFDFYK--EEMVTEEEVDGLYGRTVDALEDLELRNMLRQEEDPMDAVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA+ML+RMY RWAE   +K       DG+EAGIK+ T+ I+G  AYG+LK
Sbjct: 128 SGAGGTESQDWASMLMRMYMRWAESHGYKCTVSNYQDGDEAGIKTVTMQIEGEFAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+ +  S    D +R+ GAGGQ+
Sbjct: 188 SENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVYVDPSRVSWDLFRSGGAGGQN 247

Query: 243 VNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  ++ VR+ +            ++++  + R Q +N+  A  +L+++LY+  LQKR+ 
Sbjct: 248 VNKVETGVRLRYQYKDPDTGEEEEILIENTESRKQLENRENAMRLLKSQLYDRALQKRKA 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG LD F+K+ L 
Sbjct: 308 KQAEIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGKLDGFIKSYLM 364


>gi|297582072|ref|ZP_06943991.1| peptide chain release factor 1 [Vibrio cholerae RC385]
 gi|297533767|gb|EFH72609.1| peptide chain release factor 1 [Vibrio cholerae RC385]
          Length = 362

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 180/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72
            ++ V+R   +     DP +  +  + + L +E   L+      +  Q    D      +
Sbjct: 9   LESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +    E       E       I+   +  Q   L     D  + +LE+ AGAGG E+  
Sbjct: 69  AQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AEK+ ++ E +   + E  G K     + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P + ++   EI  SD +IDT+R+SGAGGQHVNTTDSA+RI
Sbjct: 189 VPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E  KR     I ++ +  +G G   
Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAE--ISDTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+     ++V++GD+   +   +   +
Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTVYRLTEVMEGDMQSLVDPVIHEHQ 351


>gi|78484734|ref|YP_390659.1| peptide chain release factor 1 [Thiomicrospira crunogena XCL-2]
 gi|119361633|sp|Q31IN8|RF1_THICR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78363020|gb|ABB40985.1| bacterial peptide chain release factor 1 (bRF-1) [Thiomicrospira
           crunogena XCL-2]
          Length = 363

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 107/342 (31%), Positives = 175/342 (51%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N V+RL  +N    DP +  N  + + L +E   L   +    +      D     ++
Sbjct: 9   LENLVERLDEVNHLISDPEIINNQNKFRNLTKEHSQLTPVVETFNQFIQNQGDLQEAKDM 68

Query: 76  ALEEDDC-SILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGTESQD 132
               D     + +        +      + + +       D  + +LE+ AG GG E+  
Sbjct: 69  IKSGDPDLKEMGQEELPELEKQQATLEAELQKMLLPKDPNDDANIFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE  +++ E +   +GE  G K     I G  AY  LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAETMRWQVEVINSQEGEHGGYKEIIARIIGDGAYSRLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ + P   D  +I+++ +D ++DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPATETQGRVHTSAATVVIMPEAQDVEQIDLNPADLKVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG VV+CQ ERSQHKN+A+A ++L +++ +   ++R     I +  K+ +G G   
Sbjct: 249 THIPTGTVVECQDERSQHKNRARAMSLLASRIMD--ERQRIHDQEIAQERKSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +IR+Y   P   V D R N+      +++ G L   +   +
Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLDEIMQGGLQQVVDPLI 347


>gi|53717070|ref|YP_105275.1| peptide chain release factor 1 [Burkholderia mallei ATCC 23344]
 gi|67639917|ref|ZP_00438745.1| peptide chain release factor 1 [Burkholderia mallei GB8 horse 4]
 gi|121597849|ref|YP_990282.1| peptide chain release factor 1 [Burkholderia mallei SAVP1]
 gi|124382410|ref|YP_001024781.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10229]
 gi|126447218|ref|YP_001079120.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10247]
 gi|251768001|ref|ZP_04820356.1| peptide chain release factor 1 [Burkholderia mallei PRL-20]
 gi|254175822|ref|ZP_04882481.1| peptide chain release factor 1 [Burkholderia mallei ATCC 10399]
 gi|254203239|ref|ZP_04909601.1| peptide chain release factor 1 [Burkholderia mallei FMH]
 gi|254208574|ref|ZP_04914923.1| peptide chain release factor 1 [Burkholderia mallei JHU]
 gi|254355790|ref|ZP_04972069.1| peptide chain release factor 1 [Burkholderia mallei 2002721280]
 gi|61214592|sp|Q62DF3|RF1_BURMA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223532|sp|A3MFT4|RF1_BURM7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223533|sp|A2RYL2|RF1_BURM9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223534|sp|A1UWC9|RF1_BURMS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|52423040|gb|AAU46610.1| peptide chain release factor 1 [Burkholderia mallei ATCC 23344]
 gi|121225647|gb|ABM49178.1| peptide chain release factor 1 [Burkholderia mallei SAVP1]
 gi|124290430|gb|ABM99699.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10229]
 gi|126240072|gb|ABO03184.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10247]
 gi|147746284|gb|EDK53362.1| peptide chain release factor 1 [Burkholderia mallei FMH]
 gi|147751261|gb|EDK58329.1| peptide chain release factor 1 [Burkholderia mallei JHU]
 gi|148024761|gb|EDK82944.1| peptide chain release factor 1 [Burkholderia mallei 2002721280]
 gi|160696865|gb|EDP86835.1| peptide chain release factor 1 [Burkholderia mallei ATCC 10399]
 gi|238520529|gb|EEP83988.1| peptide chain release factor 1 [Burkholderia mallei GB8 horse 4]
 gi|243061104|gb|EES43290.1| peptide chain release factor 1 [Burkholderia mallei PRL-20]
          Length = 360

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 177/346 (51%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72
            D    RL+ LN      ++  ++ + + L RE   +   +    + +    D      L
Sbjct: 9   LDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQEL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L  A   D        + +                     D  + ++E+ AG GG ES  
Sbjct: 69  LADASMRDFAEDELRGARDRMGRLAAELQTMLL--PKDPNDERNIFVEIRAGTGGDESAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R
Sbjct: 127 FAGNLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV+CQ +RSQHKNK +A  +L A++ +   Q  E+ A    + K+ IG G   
Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N+       ++DGDLD+ + A ++  +
Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVSEHQ 349


>gi|328752610|gb|EGF66226.1| peptide chain release factor 2 [Propionibacterium acnes HL025PA2]
          Length = 370

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 152/353 (43%), Positives = 221/353 (62%), Gaps = 3/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D +     ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 16  LDASLSSIENVLDPEAKKAEIADLERQVAVPNLWGDQENAQRVTSRLSALQAEIERLERL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A  +D  S+ + T     +++ E++  +  +LLSG+ D  +A + + 
Sbjct: 76  RARIEDVHVLLEFAAADDKESLAEAT-TETVKLREEIDALEVRTLLSGQYDEREAVVTIR 134

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RW+E+  +K E L+    EEAGIKSAT ++  P AYG L 
Sbjct: 135 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 194

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 195 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 254

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL E   +++E   N  +S 
Sbjct: 255 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSE 314

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRTN E  +   V DGD+DDF+ A +  ++
Sbjct: 315 GN--SWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 365


>gi|86148712|ref|ZP_01066989.1| peptide chain release factor 1 [Vibrio sp. MED222]
 gi|218708755|ref|YP_002416376.1| peptide chain release factor 1 [Vibrio splendidus LGP32]
 gi|254790907|sp|B7VKH3|RF1_VIBSL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|85833505|gb|EAQ51686.1| peptide chain release factor 1 [Vibrio sp. MED222]
 gi|218321774|emb|CAV17730.1| Peptide chain release factor 1 [Vibrio splendidus LGP32]
          Length = 362

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 120/346 (34%), Positives = 181/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  N  + + L +E   L+      K  Q    D     E+
Sbjct: 9   LETLVERYEEVQHLLGDPDVLGNQDKFRALSKEYSQLEEVTGCFKSYQQAQEDLEAAEEM 68

Query: 76  ALEEDDCSILQETS---DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           A E+D            D    I+   +  Q   +     D  + +LE+ AGAGG E+  
Sbjct: 69  ANEDDAEMREMAQEEIKDAKANIERLTDELQILLIPKDPNDERNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AEK+ ++ E +  +  E+ G K     I G   YG +K E G HR+ R
Sbjct: 129 FAGNLFRMYSKFAEKKGWRVEVMSSNVSEQGGFKEMIAKISGDAVYGTMKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P + ++   EI   D +IDT+RASGAGGQHVNTTDSA+RI
Sbjct: 189 VPETESQGRVHTSACTVAVMPEIPEADLPEIKAGDLKIDTFRASGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E ++R   A I ++ +  +G G   
Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERR--AAAISDTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+     ++VL+GD+   +   L   +
Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTIYRLNEVLEGDMQSLLDPVLQEHQ 351


>gi|194290876|ref|YP_002006783.1| peptide chain release factor 1 [Cupriavidus taiwanensis LMG 19424]
 gi|238692779|sp|B3R722|RF1_CUPTR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|193224711|emb|CAQ70722.1| peptide chain release factor RF-1 [Cupriavidus taiwanensis LMG
           19424]
          Length = 360

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 175/344 (50%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  +N          N+ + + L RE   L        + +    D      L
Sbjct: 9   LDQLAERLDEVNALLAREDATANIDQYRKLSREHAELSPVAEQYSQYRQAQDDLATAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +      +     +   +      Q   L     D  +  LE+ AG GG ES  +A
Sbjct: 69  LDDPEMKDFAADEIAAARDRLEALQASLQRLLLPKDPNDDRNLLLEIRAGTGGEESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+++++ E +   + +  G K   + I G  A+  LK E G HR+ R+ 
Sbjct: 129 ADLLRMYTRYAERQRWQVEVMSESESDLGGYKEVIIRIAGDAAFSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQHVN TDSAVR+TH
Sbjct: 189 ATEAQGRIHTSACTVAVMPEADEVGEVEINPADLRIDTFRASGAGGQHVNKTDSAVRLTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A++ +  +Q R   A    + +  IG G    +
Sbjct: 249 LPTGIVVECQDDRSQHRNKDKAMKVLAARIKD--MQTRAAQAREASTRRNLIGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       ++DGD+D+ + A  A  +
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKIDMIMDGDMDELLSALSAEHQ 349


>gi|189464495|ref|ZP_03013280.1| hypothetical protein BACINT_00837 [Bacteroides intestinalis DSM
           17393]
 gi|189438285|gb|EDV07270.1| hypothetical protein BACINT_00837 [Bacteroides intestinalis DSM
           17393]
          Length = 371

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 130/358 (36%), Positives = 207/358 (57%), Gaps = 11/358 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D +    ++     +T+ P  W +   A+  M++ + L   I+   EI
Sbjct: 10  VKERTEALYRYLDIEGKKIQVEEEQLRTQAPGFWDDQKAAEAQMKKVKGLQQWIAGYNEI 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +     D+    +E  +   +    ++  + +++L  EAD  D  L+++
Sbjct: 70  KTLSEELQLAFDFYK--DELVTEEEIDEAYAKASTAIDELELKNMLRDEADQMDCVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA+ML+RMY R+AE   +K     + +G+EAGIK+ T+ I G  AYG+LK
Sbjct: 128 SGAGGTESQDWASMLMRMYLRYAETNGYKAVISNLQEGDEAGIKTCTIEISGDYAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+ I+ ++   DT+R+SGAGGQ+
Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVNINVANISWDTFRSSGAGGQN 247

Query: 243 VNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  +S VR+ +            ++++  + R Q KN+  A   LR+ LY+ ELQ R  
Sbjct: 248 VNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMA 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L 
Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYLM 364


>gi|152980137|ref|YP_001351903.1| peptide chain release factor 1 [Janthinobacterium sp. Marseille]
 gi|166223564|sp|A6SUF6|RF1_JANMA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|151280214|gb|ABR88624.1| RF-1 peptide chain release factor [Janthinobacterium sp. Marseille]
          Length = 360

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 177/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  LN          N+   + + RE   L   ++     +    D      +
Sbjct: 9   LDQLTERLDELNVLLMQEDATSNMDNYRKMTREHAELGPLVALYGNYRQADSDIQDAQGM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D     QE       R++      Q   L     D  + +LE+ AG GG E+  +A
Sbjct: 69  LSDPDMKEFAQEEIAAAKTRMEQLEIDLQKMLLPKDPNDDRNIFLEIRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+ +++ E +     E  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYSRFAERNRWQIEMVSESASEVGGYKEVIVRIIGFGAYSKLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ + P  D+  ++ I+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 ATETQGRIHTSACTVAIMPEADEVEDVNINPADLRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ +RSQHKNKA A  +L A++ +++L  RE+ +    + K+ IG G    +
Sbjct: 249 IPTGIVVECQDDRSQHKNKASALKVLAARIKDVQL--REQQSKEAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++DGDL +   A  A  +
Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYKLDFIMDGDLTELTNALAAEHQ 349


>gi|313764090|gb|EFS35454.1| peptide chain release factor 2 [Propionibacterium acnes HL013PA1]
 gi|314914951|gb|EFS78782.1| peptide chain release factor 2 [Propionibacterium acnes HL005PA4]
          Length = 370

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 152/353 (43%), Positives = 221/353 (62%), Gaps = 3/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L+ +  + D +     ++ L  +   P+LW +   A+ +      L   I  ++ +
Sbjct: 16  LDASLSSIENVLDPEAKKAEIADLERQGAVPNLWDDQENAQRVTSRLSALQAEIERLERL 75

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + R+ D  +LLE A  +D  S+ + T     +++ E++  +  +LLSG+ D  +A + + 
Sbjct: 76  RARIEDVHVLLEFAAADDKESLAEAT-TETVKLREEIDALEVRTLLSGQYDEREAVVTIR 134

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           + AGG ++ D+A MLLRMY RW+E+  +K E L+    EEAGIKSAT ++  P AYG L 
Sbjct: 135 SEAGGVDAADFAEMLLRMYLRWSERHGYKVEILDTSYAEEAGIKSATFVVHAPFAYGTLS 194

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQG HRLVRISP+D+  RR TSF+ + V PVV+++  ++I ESD R+D + ASG GGQ 
Sbjct: 195 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPESDLRVDVFHASGPGGQG 254

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL E   +++E   N  +S 
Sbjct: 255 VNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSE 314

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                WG Q+RSYVL PYQMVKDLRTN E  +   V DGD+DDF+ A +  ++
Sbjct: 315 GN--SWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 365


>gi|78778568|ref|YP_396680.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9312]
 gi|78712067|gb|ABB49244.1| bacterial peptide chain release factor 2 (bRF-2) [Prochlorococcus
           marinus str. MIT 9312]
          Length = 354

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 138/344 (40%), Positives = 202/344 (58%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L  +FD      +   L   +  P  W+N   AK  M     +   +  + + +  + D 
Sbjct: 2   LRIVFDVPRLKAKRRELEQISAQPEFWENQEAAKKQMLILDDVKAQLELLDKWKTFISDA 61

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              LEL   E +  ++ E+   L++++  ++  +FE LL GE D   A + + AGAGGT+
Sbjct: 62  NASLELYSLEPEEEMILESQQGLKKLRDNLDKWEFERLLCGEYDKEGAVVSIKAGAGGTD 121

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW  +LLRMY+RWA+  +      E+  GEEAGIKS T  I G  AYG+L+ E+G HR
Sbjct: 122 AQDWVEILLRMYSRWADNNQMSLIINELSQGEEAGIKSVTFEIDGKYAYGYLQYEKGTHR 181

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+++N +R TSF+ + V P +DD+I ++I E D  I T R+ GAGGQ+VN  ++A
Sbjct: 182 LVRISPFNANGKRQTSFAGVEVMPKLDDNISLDIPEKDLEITTSRSGGAGGQNVNKVETA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRI H+P+G+ V+C QERSQ +NK +A  +L++KL  +  ++R       +    E  WG
Sbjct: 242 VRIVHLPSGISVRCTQERSQLQNKEKAMLLLKSKLLVIAKEQRAAEIADIKGDIVEAAWG 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIR+YV  PYQMVKDLRT  E      VLDG L+ F+   L +
Sbjct: 302 NQIRNYVFHPYQMVKDLRTMQETNELDSVLDGGLEPFIHELLRM 345


>gi|89897615|ref|YP_521102.1| hypothetical protein DSY4869 [Desulfitobacterium hafniense Y51]
 gi|89337063|dbj|BAE86658.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 315

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 152/307 (49%), Positives = 211/307 (68%), Gaps = 1/307 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+E  +    +     +Q +L D L L ++A+EE D S+  E  + +  ++  ++  + E
Sbjct: 2   MQELSYQQEKVKTYYTLQQQLDDLLTLYQMAVEEKDESLEPELEEGILALQQRLDGLELE 61

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSG  D N+A + +HAGAGGTE+QDW +ML RMY R+ E+  +K E ++   G+EAGI
Sbjct: 62  ILLSGPYDRNNAIVTLHAGAGGTEAQDWVSMLYRMYIRYGERHGYKVETMDFLPGDEAGI 121

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEIS 224
           KSATL   G NA+G+LK E+GVHRLVRISP+D++ RRHTSF+S+ V P  ++D+ EI+I 
Sbjct: 122 KSATLSFAGENAFGYLKAEKGVHRLVRISPFDASGRRHTSFASVDVIPEVMEDNAEIQIP 181

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
             D ++DTYRASGAGGQHVN T SAVRITH+PTG+VVQ Q ERSQ +N+A    +L+AKL
Sbjct: 182 PEDLKVDTYRASGAGGQHVNKTSSAVRITHLPTGIVVQSQSERSQIQNRAYCLRILQAKL 241

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
            EL+ +++E+  +     + EI WG QIRSYV  PY MVKD RTN E  +   V+DG++D
Sbjct: 242 LELKRKQQEDEISEIRGEQQEIAWGSQIRSYVFHPYNMVKDHRTNEETANTGAVMDGEID 301

Query: 345 DFMKATL 351
            F+ A L
Sbjct: 302 QFIAAYL 308


>gi|85059854|ref|YP_455556.1| peptide chain release factor 1 [Sodalis glossinidius str.
           'morsitans']
 gi|119361611|sp|Q2NRS4|RF1_SODGM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|84780374|dbj|BAE75151.1| peptide chain release factor RF-1 [Sodalis glossinidius str.
           'morsitans']
          Length = 360

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 116/337 (34%), Positives = 173/337 (51%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     DP +  + I  + L +E   L +     +       D      L
Sbjct: 9   LEALQERREEVEVLLGDPGVISDQIRFRALSKEYAQLSDVTRCFQHWWQVQEDIHTAEHL 68

Query: 76  ALEEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE        ++   +  Q   L     D    +LEV AG GG E+  +A
Sbjct: 69  LQDPEMRDMAQEELLASGASLEQLEQQLQVLLLPRDPDDERGCFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R++K E +    GE  G K     +    AYG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAETRRWKVEIVSASYGEHGGFKEVIAKVSHEGAYGLLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVMPEIPEAELPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A  +L A+L   E+Q+R++      + +  +G G    +
Sbjct: 249 LPTGLVVECQDERSQHKNKAKALAVLGARLRAAEVQRRQQE--ESSTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           IR+Y   P   V D R  +      +V++G LD  ++
Sbjct: 307 IRTYNF-PQGRVTDHRIGLTLYRLDEVIEGKLDMLIQ 342


>gi|332140922|ref|YP_004426660.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|332140929|ref|YP_004426667.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|238693241|sp|B4RSV6|RF1_ALTMD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|327550944|gb|AEA97662.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327550951|gb|AEA97669.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 361

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 118/346 (34%), Positives = 184/346 (53%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72
            ++ V+R   +     DP +  +  + + L +E   L++ ++     Q    +      +
Sbjct: 9   LEHLVERFEEVQALLGDPEVIGDQDKFRNLSKEFSQLEDVVAGFNAYQQAQENLASAQEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L     E      +E  +    I+      Q   L     D N+ +LE+ AGAGG E+  
Sbjct: 69  LNEDDAEMREMAQEEMKEAKGEIERLETELQVLLLPKDPNDDNNCFLEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE R ++ E +  ++ E  G K     + G   YG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAESRGWRVELVNANESEHGGYKEVVANVSGDGVYGVLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P + +S  IEI+ ++ RIDT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVAVLPEIPESEAIEINPAELRIDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ ERSQHKN+A+A ++L+A+L ++E    +  A    + K+ +G G   
Sbjct: 249 THLPTGLVVECQDERSQHKNRAKAMSVLQARLNQIEE--EKRAAEEASTRKSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+      +V++GDL   +   L   +
Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTIYRLDEVVEGDLKQLVDPILQEHQ 351


>gi|189459974|ref|ZP_03008759.1| hypothetical protein BACCOP_00608 [Bacteroides coprocola DSM 17136]
 gi|189433347|gb|EDV02332.1| hypothetical protein BACCOP_00608 [Bacteroides coprocola DSM 17136]
          Length = 371

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 131/358 (36%), Positives = 206/358 (57%), Gaps = 11/358 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D +N   ++     +T+ P  W +  +A+  M++ + L   I     +
Sbjct: 10  VKTRTEALYRYLDIENKKVQVEEEQLRTQAPGFWDDAKKAEAQMKKVKSLQGWIEGYNAV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +     D+    +E  +   +    +E  + +++L  EAD  D  L+++
Sbjct: 70  KTLTDELELAFDFYK--DELVTEEEVDEAYAKSLQALEELELKNMLRSEADQMDCVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDW++ML+RMY RWAE   +K     + +G+EAGIK+ T+ I+G  AYG+LK
Sbjct: 128 SGAGGTESQDWSSMLMRMYMRWAESNGYKLSVANLQEGDEAGIKTVTMNIEGAYAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+ +  +    DT+R+ GAGGQ+
Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVVVEPARLSWDTFRSGGAGGQN 247

Query: 243 VNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  +S VR+ +            ++++  + R Q KNK  A   LR+ LY+ ELQ R E
Sbjct: 248 VNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNKENAMRQLRSILYDKELQHRME 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L 
Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGKIDGFIKAYLM 364


>gi|160878572|ref|YP_001557540.1| peptide chain release factor 1 [Clostridium phytofermentans ISDg]
 gi|189039966|sp|A9KHD4|RF1_CLOPH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|160427238|gb|ABX40801.1| peptide chain release factor 1 [Clostridium phytofermentans ISDg]
          Length = 358

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 113/351 (32%), Positives = 187/351 (53%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ + R   +  +  +P +  +    + LM+E+  L   +    E +    +   
Sbjct: 1   MFDKLEDLLIRFQEIQNELNEPTVTNDQARFRKLMKEQNDLGEIVDKYLEYKQTKKNIEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            LEL  EE D  + +   + L   K  +   +       L     DS +  +E+  GAGG
Sbjct: 61  SLELLDEESDEEMRELAKEELSTSKANLVVIEEQLKILLLPKDPNDSKNVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+++AE  ++K + + +++    G K    +I G  AY  LK E GV
Sbjct: 121 DEAALFAAELFRMYSKYAETMRWKIDMMNLNENGIGGFKEVIFMINGQGAYSKLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS  ++ + P   + +++E++ +DCR D +R+SG GGQ VNTTD
Sbjct: 181 HRVQRIPVTESGGRIHTSTVTVAIMP-EAEEVDVELNMNDCRFDVFRSSGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+V+ CQ E+SQ KN+ +A  +LRA+LYELEL+K         + K+++G
Sbjct: 240 SAVRLTHMPTGIVISCQDEKSQLKNRDKALKVLRARLYELELEK--AHDAEAAARKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P     D R  +      D+++GDL + + +  A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRCTDHRIKLTSHRLDDIMNGDLQEVIDSLTAADQ 347


>gi|313893571|ref|ZP_07827140.1| peptide chain release factor 1 [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313441842|gb|EFR60265.1| peptide chain release factor 1 [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 360

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 114/348 (32%), Positives = 182/348 (52%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 +   L  +  DP +     E + L R+   L   +   +  +  L      +E+
Sbjct: 6   LQVIEDKFMDLEQRISDPEIIARQDEWRKLTRQHSQLSETVETFRTYKKVLAGLDEAMEV 65

Query: 76  ALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             ++      +E +         + +   E  Q   L     D  +  +E+  GAGG E+
Sbjct: 66  IEDKSLDEEFREMAQEELKELKPQKEELEEKLQILLLPKDPNDDKNIIIEIRGGAGGDEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMYT++AE + ++ E ++ ++ E  G K     ++G N Y  +K E GVHR+
Sbjct: 126 ALFAGDLFRMYTKYAESQGWRCEIIDANEPELGGFKEVVFSVEGENVYSKMKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS  ++ V P   + ++IE++E D +IDTYRASGAGGQH+N T+SAV
Sbjct: 186 QRVPATETQGRVHTSTVTVAVLP-EMEDVDIEVNEKDLKIDTYRASGAGGQHINKTESAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VV CQ +RSQ KNK +A  +LRAKL +    ++E  A++    K+++G G 
Sbjct: 245 RITHLPTGIVVACQDQRSQLKNKDKAMRVLRAKLQD--QAEQEAQASMAADRKSQVGTGD 302

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       VL+GDLD+ ++A  A  +
Sbjct: 303 RSERIRTYNY-PQGRVTDHRINLTLYKLDAVLNGDLDEIIQALNAADQ 349


>gi|332295608|ref|YP_004437531.1| peptide chain release factor 2 [Thermodesulfobium narugense DSM
           14796]
 gi|332178711|gb|AEE14400.1| peptide chain release factor 2 [Thermodesulfobium narugense DSM
           14796]
          Length = 363

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 148/352 (42%), Positives = 223/352 (63%), Gaps = 5/352 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ ++  +    D DN +++L  +     +P +WQ+V ++  L +   +L  +I     +
Sbjct: 9   LNERILKIRDCLDLDNKIKKLEEIRNDLSNPEIWQDVQKSSNLTQLADNLQKSIDEWNNL 68

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
                D         E  D     E +++ + +   +E  + ++LLSG+ DS DA L + 
Sbjct: 69  NSSFED----FLFWTEFQDEGAENEIAESYKNLVKILEELEVKALLSGKYDSYDAMLSIS 124

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++QD+A MLLRMY RW EK K+  E ++   G+EAGI+SAT+  KG  +YG+LK
Sbjct: 125 AGAGGVDAQDFAEMLLRMYIRWGEKNKYSVELVDQSPGDEAGIRSATIFFKGKYSYGFLK 184

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            EQGVHRL+R+SP+D N+RRHTSF  + V P++++  EI +   + +I+T+RASGAGGQH
Sbjct: 185 SEQGVHRLIRLSPFDFNNRRHTSFVLVEVTPLIENVKEINVKNEEIKIETFRASGAGGQH 244

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN TDSAVRITH+PTG+VV C+ ERSQ +NK  A  +L ++L  L  +K+++  +  +  
Sbjct: 245 VNKTDSAVRITHLPTGIVVTCRNERSQFQNKEAAMKILISRLNSLYEEKQKDKMSEFKGE 304

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            T+  WG+QIR+YV+ PY MVKD RTN+E      VLDG++D+F KA L  +
Sbjct: 305 -TDASWGKQIRTYVMHPYTMVKDHRTNVEIGDVYGVLDGNIDEFQKAFLLKE 355


>gi|53720682|ref|YP_109668.1| peptide chain release factor 1 [Burkholderia pseudomallei K96243]
 gi|76809766|ref|YP_334968.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710b]
 gi|126440521|ref|YP_001060595.1| peptide chain release factor 1 [Burkholderia pseudomallei 668]
 gi|126454756|ref|YP_001067845.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106a]
 gi|134283294|ref|ZP_01769995.1| peptide chain release factor 1 [Burkholderia pseudomallei 305]
 gi|167721407|ref|ZP_02404643.1| peptide chain release factor 1 [Burkholderia pseudomallei DM98]
 gi|167740375|ref|ZP_02413149.1| peptide chain release factor 1 [Burkholderia pseudomallei 14]
 gi|167817592|ref|ZP_02449272.1| peptide chain release factor 1 [Burkholderia pseudomallei 91]
 gi|167825994|ref|ZP_02457465.1| peptide chain release factor 1 [Burkholderia pseudomallei 9]
 gi|167847481|ref|ZP_02472989.1| peptide chain release factor 1 [Burkholderia pseudomallei B7210]
 gi|167896069|ref|ZP_02483471.1| peptide chain release factor 1 [Burkholderia pseudomallei 7894]
 gi|167904455|ref|ZP_02491660.1| peptide chain release factor 1 [Burkholderia pseudomallei NCTC
           13177]
 gi|167912716|ref|ZP_02499807.1| peptide chain release factor 1 [Burkholderia pseudomallei 112]
 gi|167920676|ref|ZP_02507767.1| peptide chain release factor 1 [Burkholderia pseudomallei BCC215]
 gi|217424712|ref|ZP_03456209.1| peptide chain release factor 1 [Burkholderia pseudomallei 576]
 gi|226198171|ref|ZP_03793742.1| peptide chain release factor 1 [Burkholderia pseudomallei Pakistan
           9]
 gi|237813980|ref|YP_002898431.1| peptide chain release factor 1 [Burkholderia pseudomallei MSHR346]
 gi|242316197|ref|ZP_04815213.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106b]
 gi|254190473|ref|ZP_04896981.1| peptide chain release factor 1 [Burkholderia pseudomallei Pasteur
           52237]
 gi|254198514|ref|ZP_04904935.1| peptide chain release factor 1 [Burkholderia pseudomallei S13]
 gi|254260133|ref|ZP_04951187.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710a]
 gi|254300725|ref|ZP_04968170.1| peptide chain release factor 1 [Burkholderia pseudomallei 406e]
 gi|61214599|sp|Q63QF0|RF1_BURPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361515|sp|Q3JN85|RF1_BURP1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223535|sp|A3NZS4|RF1_BURP0 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223536|sp|A3NE24|RF1_BURP6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|52211096|emb|CAH37084.1| peptide chain release factor 1 [Burkholderia pseudomallei K96243]
 gi|76579219|gb|ABA48694.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710b]
 gi|126220014|gb|ABN83520.1| peptide chain release factor 1 [Burkholderia pseudomallei 668]
 gi|126228398|gb|ABN91938.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106a]
 gi|134245489|gb|EBA45582.1| peptide chain release factor 1 [Burkholderia pseudomallei 305]
 gi|157810508|gb|EDO87678.1| peptide chain release factor 1 [Burkholderia pseudomallei 406e]
 gi|157938149|gb|EDO93819.1| peptide chain release factor 1 [Burkholderia pseudomallei Pasteur
           52237]
 gi|169655254|gb|EDS87947.1| peptide chain release factor 1 [Burkholderia pseudomallei S13]
 gi|217392168|gb|EEC32193.1| peptide chain release factor 1 [Burkholderia pseudomallei 576]
 gi|225929691|gb|EEH25707.1| peptide chain release factor 1 [Burkholderia pseudomallei Pakistan
           9]
 gi|237505256|gb|ACQ97574.1| peptide chain release factor 1 [Burkholderia pseudomallei MSHR346]
 gi|242139436|gb|EES25838.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106b]
 gi|254218822|gb|EET08206.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710a]
          Length = 360

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 177/346 (51%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72
            D    RL+ LN      ++  ++ + + L RE   +   +    + +    D      L
Sbjct: 9   LDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQEL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L  A   D        + +                     D  + ++E+ AG GG ES  
Sbjct: 69  LADASMRDFAEDELRGARDRMGRLAAELQTMLL--PKDPNDERNIFVEIRAGTGGDESAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R
Sbjct: 127 FAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV+CQ +RSQHKNK +A  +L A++ +   Q  E+ A    + K+ IG G   
Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N+       ++DGDLD+ + A ++  +
Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVSEHQ 349


>gi|311109118|ref|YP_003981971.1| peptide chain release factor [Achromobacter xylosoxidans A8]
 gi|310763807|gb|ADP19256.1| peptide chain release factor 1 [Achromobacter xylosoxidans A8]
          Length = 360

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 181/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   RL  ++    +P    ++   + L RER  L+  +           D     E+
Sbjct: 9   LEHLCHRLIEVDALLAEPETASDMDRFRKLSRERAELEPVVEAFTAFARTEDDLAAAQEM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  S+ ++   +   +++      Q   L     D    +LE+ AG GG ES  ++
Sbjct: 69  LSDPDLKSMAEDEIKSGRAKLEELEAALQLLLLPRDPNDGRSLFLEIRAGTGGDESALFS 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+R ++ E +     E  G K     I G  AYG LK E G HR+ R+ 
Sbjct: 129 GDLLRMYTRYAEQRGWRVELMSESASELGGYKEVIARIDGDGAYGRLKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ +    D+  EI I+ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATEAQGRIHTSACTVAIMAEADEMSEIVINPNDLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A+L + E ++R+  +      K+ IG G    +
Sbjct: 249 LPTGLVVECQDDRSQHRNKDKAMQVLAARLKDKETRERQ--SKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       +++GDL++   A +A  +
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKLQQIMEGDLEELTGALIAEHQ 349


>gi|90407674|ref|ZP_01215854.1| peptide chain release factor 1 [Psychromonas sp. CNPT3]
 gi|90311265|gb|EAS39370.1| peptide chain release factor 1 [Psychromonas sp. CNPT3]
          Length = 363

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 179/346 (51%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP    +  + + L +E   L+  +   K  Q  + D      +
Sbjct: 9   LEGLVERYEEVQALLGDPATLADQDKYRKLTKEYSQLEVVVLSFKGYQGAVEDLESAKMM 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             ++D         +       ++      +   L     D  + Y+E+ AGAGG E+  
Sbjct: 69  LEDDDPEMQEMAVEEVKEAKATLETLSSELEILLLPKDPNDDRNCYIEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++ + +K++ E +  +  E+ G K     I+G  AYG +K E G HR+ R
Sbjct: 129 FAGNLFRMYSKYIDSKKWRLEIMNTNASEQGGYKEVIAKIEGEGAYGIMKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P V ++  I I+ +D ++DT+RASGAGGQHVN TDSAVR+
Sbjct: 189 VPETESQGRIHTSACTVVVMPEVPEAEAIVINPADLKVDTFRASGAGGQHVNKTDSAVRL 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG VV+CQ +RSQHKN+AQA ++L+A+L + E +K      +    ++ +  G   
Sbjct: 249 THIPTGTVVECQDQRSQHKNRAQAMSVLQARLQQAEDEKNHAEEQVI--RRSLVASGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+      D+L+G+LD  +   L   +
Sbjct: 307 ERIRTYNY-PQGRVSDHRINLTLYCLHDILEGELDALLDPILLEDQ 351


>gi|304317929|ref|YP_003853074.1| peptide chain release factor 1 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779431|gb|ADL69990.1| peptide chain release factor 1 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 353

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 123/345 (35%), Positives = 184/345 (53%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L+ K  DP   +++ E K + +E   L+  +   +E +  L D     E+
Sbjct: 5   LKTIEDRYVELSRKLSDPESMKDMDEWKKMAKEHASLEEIVQKYREYKKVLDDIKSTKEI 64

Query: 76  ALEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
              +DD   + +        +    +   +   L     D  D  +E+ AGAGG E+  +
Sbjct: 65  IELDDDLKDMAQEELKSLEERENKLLNEIKLLLLPKDPNDEKDVIMEIRAGAGGEEAALF 124

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMYT +AEK+ +K E +  +  E  G K   L I G  AY  LK E GVHR+ RI
Sbjct: 125 AYDLFRMYTMYAEKKHWKYEIMSSNATELGGFKEVILNIAGKGAYSRLKFESGVHRVQRI 184

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ V P   + ++IEI+ +D +ID +R+ G GGQ VNTTDSAVR+T
Sbjct: 185 PTTEAGGRIHTSTATVAVLP-EVEDVDIEINPNDIKIDVFRSGGHGGQSVNTTDSAVRLT 243

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           HIPTG+V+ CQ ERSQ +N+ +A  +LRAKLYE+  +++E+   I  + K ++G G    
Sbjct: 244 HIPTGIVISCQDERSQLQNRERAMKILRAKLYEMAREEKEKE--ISMTRKLQVGTGDRSE 301

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       VLDGDLD+ + A LA  +
Sbjct: 302 RIRTYNF-PQGRVTDHRIGLTLYKLQMVLDGDLDEIIDALLAEDQ 345


>gi|86156794|ref|YP_463579.1| peptide chain release factor 1 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|119361506|sp|Q2IMW2|RF1_ANADE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|85773305|gb|ABC80142.1| bacterial peptide chain release factor 1 (bRF-1) [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 370

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 113/341 (33%), Positives = 187/341 (54%), Gaps = 10/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72
            +   QR   L     DP +  N    + + +ER  ++  ++ ++  +  L D   N  L
Sbjct: 10  LEAIEQRFEELTQLLSDPAVAGNGDRFRKVAKERASIEQTVTALRAYRKLLDDVAGNEAL 69

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L     E      +E +    +++   E  +   +     D  D  +E+ AGAGG E+  
Sbjct: 70  LGDKDPELRELAKEELAQLRPQVEPAEEQLKLYLVPKDPNDEKDVIVEIRAGAGGDEAGL 129

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  ++RMY R+AE+R ++ E ++   G   G+K ATL + G   Y  LK E GVHR+ R
Sbjct: 130 FAAEVMRMYVRYAERRGWRVELMDTSGGALGGVKEATLTVSGDAVYSSLKYESGVHRVQR 189

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P   + I+++++ +D  +D +R++G+GGQ VNTTDSAVR+
Sbjct: 190 VPATEAQGRIHTSTVTVAVMP-EAEEIDVQVNPADVEMDVFRSTGSGGQSVNTTDSAVRL 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH PTG+VV+CQQE+SQ KN+  A  MLRAKL+E+E +++    +   + K+++G G   
Sbjct: 249 THKPTGIVVKCQQEKSQLKNRTMAMKMLRAKLFEIEQERQRSARD--ATRKSQVGTGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            +IR+Y   P   + D R N  + +   V+DGD+ D + A 
Sbjct: 307 EKIRTYNF-PQDRLTDHRVNYTRHNLPAVMDGDVQDVIDAC 346


>gi|92113653|ref|YP_573581.1| peptide chain release factor 1 [Chromohalobacter salexigens DSM
           3043]
 gi|119361523|sp|Q1QXC6|RF1_CHRSD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91796743|gb|ABE58882.1| bacterial peptide chain release factor 1 (bRF-1) [Chromohalobacter
           salexigens DSM 3043]
          Length = 361

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 104/342 (30%), Positives = 175/342 (51%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R   L     +P +  +    +   RE   L+  I   +  +    D     ++
Sbjct: 9   LDGFQERFEELAALLAEPDVIADQARFRDYSREYAELEPLIEAWRSYRRTEDDLEAAEQM 68

Query: 76  ALEEDDCSILQETSDNLQRI---KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +  +     +      +   +     D+++ +LE+ AG GG E+  
Sbjct: 69  REDSDPEMRELAEEEWREAQARLEALDADVKRLLVPRDPDDASNVFLEIRAGTGGDEAAL 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AEK  ++ E +    GE+ G K     ++G N Y  LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAEKVGWRIEVINASHGEQGGYKELIARVRGDNVYARLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V        E+E++ +D R+DT+R+SGAGGQHVNTTDSA+RI
Sbjct: 189 VPATESQGRIHTSACTVAVMAEASAVGEVELNSNDLRVDTFRSSGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+P+G+VV+CQ+ERSQHKN+A+A  +L A+L +  +  + +     ++ ++ +G G   
Sbjct: 249 THLPSGLVVECQEERSQHKNRAKAMALLAARLKQSAVDAQRQ--QQADTRRSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +IR+Y   P   + D R N+      DV+ G+L + +   +
Sbjct: 307 ERIRTYNF-PQGRITDHRINLTLYKLGDVMAGELGEVIDPLI 347


>gi|326564766|gb|EGE14978.1| peptide chain release factor 2 [Moraxella catarrhalis 46P47B1]
          Length = 304

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 172/302 (56%), Positives = 221/302 (73%), Gaps = 1/302 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           LD  +  I  +  +L D   +LELA+E+DD S+L +    L      VE  +F  + SGE
Sbjct: 2   LDGIVGVIDGLSAKLDDAAAMLELAVEDDDESLLSDVQAELDDALNSVEELEFRRMFSGE 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D+N+ YL++ +G+GGTE+QDWA MLLRMY RW E   FK E LE+ +G  AGIKSAT++
Sbjct: 62  MDANNCYLDIQSGSGGTEAQDWAQMLLRMYLRWCESHGFKAEVLEVSEGGVAGIKSATIM 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           +KG  A+GWL+ E GVHRLVR SP+DSN+ RHTSF++++V P +DD+I+I+I+ +D RID
Sbjct: 122 VKGDYAFGWLRTEIGVHRLVRKSPFDSNNGRHTSFAAVFVSPEIDDNIDIDINPADLRID 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYR+SGAGGQHVNTTDSAVRITH PTGVVV CQ ERSQH NK  A  MLRAKLYELE+QK
Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHQPTGVVVACQNERSQHANKDTAMKMLRAKLYELEMQK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R E     E SK++IGWG QIRSYVL     +KDLRT +E ++ + VL+GDLD F++A+L
Sbjct: 242 RMEKQQALEESKSDIGWGSQIRSYVLDD-SRIKDLRTGVETSNTTAVLNGDLDKFIEASL 300

Query: 352 AI 353
             
Sbjct: 301 KA 302


>gi|312127875|ref|YP_003992749.1| peptide chain release factor 1 [Caldicellulosiruptor hydrothermalis
           108]
 gi|311777894|gb|ADQ07380.1| peptide chain release factor 1 [Caldicellulosiruptor hydrothermalis
           108]
          Length = 355

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 118/343 (34%), Positives = 177/343 (51%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                ++   L  K  DP +     E + LM+E  +L   +   +E +  L       EL
Sbjct: 5   LQVIEEKYLELEKKIADPEIISQTQEWQKLMKEHSNLQPIVEKFREYKRILNTIKEAEEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              + D    +   + L R K + E  +       L     D  +  +E+ AGAGG E+ 
Sbjct: 65  LDTDLDEDFEKLVKEELNRAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE++ +K E +   + +  G K    +I G  AY  LK E GVHR+ 
Sbjct: 125 LFAAELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +E+EI E D  IDT+RA GAGGQHVN T+SAVR
Sbjct: 185 RVPVTESGGRIHTSTATVAVLP-EVEDVEVEIREEDLEIDTFRAGGAGGQHVNKTESAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           I H PTG+VV CQ ERSQH N+ +A  +LRA+LY+     +++        ++++G G  
Sbjct: 244 IVHKPTGIVVTCQDERSQHANRDRAMKILRARLYDYYQSIQQKEIE--SQRRSQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R  +       VLDG+LD+ + A +
Sbjct: 302 SERIRTYNF-PQGRVTDHRIGLTLYKLEQVLDGELDEIIDALI 343


>gi|325527071|gb|EGD04495.1| peptide chain release factor 1 [Burkholderia sp. TJI49]
          Length = 360

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 117/346 (33%), Positives = 176/346 (50%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72
            D    RL+ LN      ++  ++ + + L RE   L   +      +    D      L
Sbjct: 9   LDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRSDETAAQEL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L      D       ++            K          D  + +LE+ AG GG ES  
Sbjct: 69  LGDPSMRDFAEDEIRSARERMVRLEVELQKMLL--PKDPNDDRNIFLEIRAGTGGDESAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R
Sbjct: 127 FAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV+CQ +RSQHKNK +A  +L A++ +   Q  E+ A    + K+ IG G   
Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N+       ++DGDLD+ + A ++  +
Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELIGALVSEHQ 349


>gi|323702617|ref|ZP_08114279.1| peptide chain release factor 1 [Desulfotomaculum nigrificans DSM
           574]
 gi|323532436|gb|EGB22313.1| peptide chain release factor 1 [Desulfotomaculum nigrificans DSM
           574]
          Length = 356

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 112/351 (31%), Positives = 184/351 (52%), Gaps = 12/351 (3%)

Query: 13  LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F        +   L  +  DP +  +  + K L++    L   +   ++ +    D   
Sbjct: 1   MFAKLQALEDKFEQLEGQISDPEIIADQAKWKQLVKAHADLTEVVDVFRQYKKVRSDLEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
              +  E+ +    +     ++ +    E  +       L     D  +  +E+  G GG
Sbjct: 61  SKLMLEEKLEPDFREMVELEIEELSKRKEELEQKLKILLLPKDPNDEKNVIVEIRGGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE++ ++TE ++ ++ +  G K  T +++G  AY  LK E GV
Sbjct: 121 EEAALFAGDLFRMYSRFAERKGWRTEIIDANETDLGGFKEITFVVEGKGAYSTLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + ++IEI+ +D RID + ASG GGQ VNTT 
Sbjct: 181 HRVQRVPATESGGRIHTSAATVAVLP-EAEEVDIEINPNDIRIDLFCASGPGGQCVNTTQ 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG+VV CQ E+SQHKNK +A  +LRA+L  L+  ++E+   I  + K+ +G
Sbjct: 240 SAVRITHIPTGIVVSCQDEKSQHKNKDKAMRVLRARL--LDKAQQEQQQAIASTRKSMVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       VL+GDLD+ ++A +   +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTLHRLDQVLEGDLDEIIEALITTDQ 347


>gi|161526057|ref|YP_001581069.1| peptide chain release factor 1 [Burkholderia multivorans ATCC
           17616]
 gi|189349228|ref|YP_001944856.1| peptide chain release factor 1 [Burkholderia multivorans ATCC
           17616]
 gi|238687082|sp|A9AJ68|RF1_BURM1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|160343486|gb|ABX16572.1| peptide chain release factor 1 [Burkholderia multivorans ATCC
           17616]
 gi|189333250|dbj|BAG42320.1| peptide chain release factor RF-1 [Burkholderia multivorans ATCC
           17616]
          Length = 360

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 176/346 (50%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72
            D    RL+ LN      ++  ++ + + L RE   L   +      +    D      L
Sbjct: 9   LDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRSDETAAQEL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L      D       ++            K          D  + ++E+ AG GG ES  
Sbjct: 69  LADPSMRDFAEEEIRSARERMARLEVELQKMLL--PKDPNDDRNIFVEIRAGTGGDESAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R
Sbjct: 127 FAGDLLRMYLRFAERQRWQVEMMSESPSDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINLADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ +RSQHKNK +A  +L A++ +   Q  E+ A    + K+ IG G   
Sbjct: 247 THLPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N+       ++DGDLD+ + A ++  +
Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELIGALVSEHQ 349


>gi|332980841|ref|YP_004462282.1| peptide chain release factor 1 (bRF-1) [Mahella australiensis 50-1
           BON]
 gi|332698519|gb|AEE95460.1| bacterial peptide chain release factor 1 (bRF-1) [Mahella
           australiensis 50-1 BON]
          Length = 356

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 114/351 (32%), Positives = 190/351 (54%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  D+  +R   L+ K  DP +       + L++E   L+  ++  +E ++ +     
Sbjct: 1   MLDKLDSIEERYEQLSVKISDPEVISQQDMWRKLVKEHSDLEPIVTKYREYKEVVRQKDD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
           +L +  E  D  + +     L  +K   +  + E           D  +  +E+ AGAGG
Sbjct: 61  VLAMIKETGDAELKELAQQELDELKEREDKLEEELKRLLLPKDPNDERNVIMEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+ +AE R +K E ++ +  +  GIK     ++G  AY  LK E GV
Sbjct: 121 EEAALFAANLFRMYSLYAESRGWKIEVMDSNYTDLGGIKEIVFAVEGKGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P   + +E+EI+ +D RID YR++G GGQ VNTTD
Sbjct: 181 HRVQRVPVTEAGGRIHTSTATVAVLP-EAEEVEVEINPNDLRIDVYRSTGHGGQSVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG+VV CQ E+SQ KNK +A  +L+++L  L + + E+ A + ++ ++++G
Sbjct: 240 SAVRITHIPTGMVVTCQDEKSQLKNKDKAMRVLKSRL--LAIAQAEQDAQLAQTRRSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +        L+GD+D+ + A +   +
Sbjct: 298 TGDRSERIRTYNF-PQGRVTDHRIGLTIYQLEAFLNGDMDEMIDALITADQ 347


>gi|296272007|ref|YP_003654638.1| peptide chain release factor 2 [Arcobacter nitrofigilis DSM 7299]
 gi|296096182|gb|ADG92132.1| peptide chain release factor 2 [Arcobacter nitrofigilis DSM 7299]
          Length = 364

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 162/346 (46%), Positives = 225/346 (65%), Gaps = 2/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
             +  +   D    RL  +         W +V  A  +  E+  + + +S  K+  + L 
Sbjct: 18  QNIKDILKPDVLKSRLKEIEELESSQDFWNDVETATKIGIEKNRILSKLSKFKKANESLS 77

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
               L E+ALEE D    +      + +   +   +   +LS   DS++A + +H GAGG
Sbjct: 78  GTNELYEMALEEKDEDTFELLHGEAEELDNLIRSTEISVMLSNPDDSSNAIISIHPGAGG 137

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TESQDWA+ML RMY RWAE+  FK E L+  DGEEAG+K  + +IKG NAYG+LK E G+
Sbjct: 138 TESQDWASMLYRMYLRWAERMDFKIEVLDYQDGEEAGLKDVSFIIKGENAYGYLKAENGI 197

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVRISP+DSN++RHTSF+S+ V P +DD+I+I + + D RIDTYR+SGAGGQHVN T+
Sbjct: 198 HRLVRISPFDSNAKRHTSFASVMVSPEIDDNIDIVVEDKDIRIDTYRSSGAGGQHVNKTE 257

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SA+RITHI T +VVQCQ +RSQHKNKA A  ML+++LYE EL+K++ + +  E  K+EIG
Sbjct: 258 SAIRITHIATNIVVQCQNDRSQHKNKASAMKMLKSRLYEYELEKQQAVKDGVE--KSEIG 315

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSYV+QPYQ +KD R+NI  ++   +LDGD+   ++  L  
Sbjct: 316 WGHQIRSYVMQPYQQIKDTRSNIGYSNVEAILDGDITKMIEDVLIA 361


>gi|167838055|ref|ZP_02464914.1| peptide chain release factor 1 [Burkholderia thailandensis MSMB43]
          Length = 360

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 181/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN      ++  ++ + + L RE   +   +    + +    D L   EL
Sbjct: 9   LDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQEL 68

Query: 76  ALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +       ++       R+       Q   L     D  + ++E+ AG GG ES  +A
Sbjct: 69  LADASMRDFAEDELRGARDRMSRLAAELQTMLLPKDPNDERNIFVEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ +RSQHKNK +A  +L A++ +   Q  E+ A    + K+ IG G    +
Sbjct: 249 IPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++DGDLD+ + A ++  +
Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVSEHQ 349


>gi|216335|dbj|BAA01123.1| ORF3 [Bacillus subtilis]
          Length = 299

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 156/298 (52%), Positives = 202/298 (67%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP  W +  +A+ ++ E   L + ++  K++ +   +  +  +L  EE D  +  E  
Sbjct: 1   MADPEFWNDQQKAQTVINEANGLKDYVNSYKKLNESHEELQMTHDLLKEEPDTDLQLELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L+ +  E    + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRW E+R 
Sbjct: 61  KELKSLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGERRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D I+I+I   D ++DTYRASGAGGQHVNTTDSAVRITH+PT VVV CQ ERSQ
Sbjct: 181 EVMPEFNDEIDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
            KN+ +A  ML+AKLY+  +++++   +     + EIGWG QIRSYV  PY MVKD R
Sbjct: 241 IKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 298


>gi|124004130|ref|ZP_01688976.1| peptide chain release factor 1 [Microscilla marina ATCC 23134]
 gi|123990200|gb|EAY29699.1| peptide chain release factor 1 [Microscilla marina ATCC 23134]
          Length = 356

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 121/342 (35%), Positives = 180/342 (52%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN----LI 71
            +   +R   +      P   Q++     L +E + L+  +    E +  L +      I
Sbjct: 5   LEAIKERFDEVGQLIVKPETIQDMDLYTKLTKEYKDLEKVVEKYNEYKIVLENIDTSKEI 64

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L      E       E  +   + +   E  +   +     DS +  LE+  GAGG E+ 
Sbjct: 65  LSTEKDPEMKEMAKMELEELNPQKEKIEEELKTLLIPKDPNDSKNVILEIRGGAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AEKRK+K E ++  DG   G K     I G + YG +K E GVHR+ 
Sbjct: 125 IFAGDLLRMYQRFAEKRKWKFELMDFTDGSSGGFKEVVCSISGEDVYGMMKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P   + +E+ I  SD R D + +SG GGQ VNTT SAVR
Sbjct: 185 RVPATETQGRVHTSAASVAVLP-EMEDVEVNIDPSDVRSDYFCSSGPGGQSVNTTYSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +THIPTG+VV CQ E+SQ KNKA+A  +LR+KLYE+EL K++E   +G   K+ +G G +
Sbjct: 244 LTHIPTGIVVSCQDEKSQIKNKAKAMKVLRSKLYEIELSKQQEE--LGAQRKSMVGSGDR 301

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              IR+Y   P   V D R      +  +V+DG++ DF+++ 
Sbjct: 302 SDKIRTYNY-PQGRVTDHRIKYTVHNLPNVMDGEIADFIESL 342


>gi|15617035|ref|NP_240248.1| peptide chain release factor 2 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681787|ref|YP_002468173.1| peptide chain release factor 2 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|257471489|ref|ZP_05635488.1| peptide chain release factor 2 [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|25299669|pir||F84980 peptide chain release factor 2 [imported] - Buchnera sp.  (strain
           APS)
 gi|10039100|dbj|BAB13134.1| peptide chain release factor 2 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219624630|gb|ACL30785.1| peptide chain release factor 2 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311087327|gb|ADP67407.1| peptide chain release factor 2 [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 349

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 161/346 (46%), Positives = 238/346 (68%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
             L G+FD++    R+  ++ +   P  W   I  K L +E+  L++ I  I EI++ + 
Sbjct: 3   KILRGIFDYNKKKSRVLEIDLELSSPKTWTEQISIKKLNKEKYLLNSIIQNINEIEENIK 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + +I LELA+E  D  + +E+   +Q+I+ E++  +F  + S + D  D Y+++ +G+GG
Sbjct: 63  EVVIFLELAIETQDNLVFKESLLEIQKIEQEIKKLEFYRMFSKKNDHYDCYIDIQSGSGG 122

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           T++QDW+ MLLRMY RWA+K+ F TE ++   GE  GIKS+T+ + G  A+GW + E G+
Sbjct: 123 TDAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIKSSTIKVSGEYAFGWFRTETGI 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRL+R SP+DS  RRHTSFSSI++YP +++ I+I I+ SD RID YRASGAGGQHVN T+
Sbjct: 183 HRLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYSDLRIDVYRASGAGGQHVNRTE 242

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PT +V QCQ  RSQHKNK QA   +++KLYE++++K++E     E +K++I 
Sbjct: 243 SAVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYEIQMRKKQEEKQKIEQNKSDIT 302

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSY+L     +KDLRT +EK     VLDGDLDDF++ +L +
Sbjct: 303 WGNQIRSYILD-NSKIKDLRTGVEKNHVQSVLDGDLDDFIEQSLIM 347


>gi|238919470|ref|YP_002932985.1| peptide chain release factor 1 [Edwardsiella ictaluri 93-146]
 gi|259585221|sp|C5B814|RF1_EDWI9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238869039|gb|ACR68750.1| peptide chain release factor 1, putative [Edwardsiella ictaluri
           93-146]
          Length = 360

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 117/337 (34%), Positives = 178/337 (52%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +        +    D      L
Sbjct: 9   LEALQERHEEVQALLGDAGVIADQDRFRALSREYAQLTDVSHCFLAWRQVQDDLTTAEML 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE     +    E+E +    L      D  D +LEV AG GG E+  +A
Sbjct: 69  LDDPEMRDMAQEELKEARGRLAELEQQLQILLLPKDPDDERDCFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +GE  G K     + G  AYG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRIEIMSASEGEHGGYKEVIARVSGDGAYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P V ++   +I+ +D RIDTYR+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPAVPEAELPQINPADLRIDTYRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEIAKRQQE--EASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +R+Y   P   V D R N+      +V++G LD+ ++
Sbjct: 307 VRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDNLIE 342


>gi|167587636|ref|ZP_02380024.1| peptide chain release factor 1 [Burkholderia ubonensis Bu]
          Length = 360

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 119/346 (34%), Positives = 180/346 (52%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72
            D    RL+ LN      ++  ++ + + L RE   LD  +      +  L D      L
Sbjct: 9   LDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELDPVVGQYALWRQSLSDEAAAQEL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L  A   D       ++ +          K          D  + +LE+ AG GG ES  
Sbjct: 69  LGDASMRDFAEDEIRSARDRMVQLEVELQKMLL--PKDPNDDRNIFLEIRAGTGGDESAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R
Sbjct: 127 FAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ +RSQHKNK +A  +L A++ +   Q  E+ A    + K+ IG G   
Sbjct: 247 THLPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N+       ++DGDLD+ + A ++  +
Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELIAALVSEHQ 349


>gi|311087834|gb|ADP67913.1| peptide chain release factor 2 [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 349

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 161/346 (46%), Positives = 238/346 (68%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
             L G+FD++    R+  ++ +   P  W   I  K L +E+  L++ I  I EI++ + 
Sbjct: 3   KILRGIFDYNKKKSRVLEIDLELSSPKTWTEQISIKKLNKEKYLLNSIIQNINEIEENIK 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + +I LELA+E  D  + +E+   +Q+I+ E++  +F  + S + D  D Y+++ +G+GG
Sbjct: 63  EVVIFLELAIETQDNLVFKESLLEIQKIEQEIKKLEFYRMFSKKNDYYDCYIDIQSGSGG 122

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           T++QDW+ MLLRMY RWA+K+ F TE ++   GE  GIKS+T+ + G  A+GW + E G+
Sbjct: 123 TDAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIKSSTIKVSGEYAFGWFRTETGI 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRL+R SP+DS  RRHTSFSSI++YP +++ I+I I+ SD RID YRASGAGGQHVN T+
Sbjct: 183 HRLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYSDLRIDVYRASGAGGQHVNRTE 242

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PT +V QCQ  RSQHKNK QA   +++KLYE++++K++E     E +K++I 
Sbjct: 243 SAVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYEIQMRKKQEEKQKIEQNKSDIT 302

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSY+L     +KDLRT +EK     VLDGDLDDF++ +L +
Sbjct: 303 WGNQIRSYILD-NSKIKDLRTGVEKNHVQSVLDGDLDDFIEQSLIM 347


>gi|218131879|ref|ZP_03460683.1| hypothetical protein BACEGG_03501 [Bacteroides eggerthii DSM 20697]
 gi|317474512|ref|ZP_07933786.1| peptide chain release factor 2 [Bacteroides eggerthii 1_2_48FAA]
 gi|217986182|gb|EEC52521.1| hypothetical protein BACEGG_03501 [Bacteroides eggerthii DSM 20697]
 gi|316909193|gb|EFV30873.1| peptide chain release factor 2 [Bacteroides eggerthii 1_2_48FAA]
          Length = 372

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 132/358 (36%), Positives = 207/358 (57%), Gaps = 11/358 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D +    ++     +T+ P  W +   A+  M++ + L   IS   E+
Sbjct: 10  IKERTEALNRYLDIEGKKIQVEEEQLRTQAPGFWDDQKAAEAQMKKVKGLQQWISGYNEV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +     D+    +E  +   +    VE  + +++L  EAD  D  L+++
Sbjct: 70  RILADELQLAFDFYK--DELVTEEEVDEAYAKASAAVEALELKNMLREEADQMDCVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA+ML+RMY R+AE   +K     + +G+EAGIK+ T+ I G  AYG+LK
Sbjct: 128 SGAGGTESQDWASMLMRMYLRYAETHGYKATIANLQEGDEAGIKACTIEIAGDYAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+ I+ ++   DT+R+SGAGGQ+
Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVNINVANISWDTFRSSGAGGQN 247

Query: 243 VNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  +S VR+ +            ++++  + R Q KN+  A   LR+ LY+ ELQ R  
Sbjct: 248 VNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMA 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L 
Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFVKAYLM 364


>gi|310779238|ref|YP_003967571.1| bacterial peptide chain release factor 1 (bRF-1) [Ilyobacter
           polytropus DSM 2926]
 gi|309748561|gb|ADO83223.1| bacterial peptide chain release factor 1 (bRF-1) [Ilyobacter
           polytropus DSM 2926]
          Length = 357

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 113/351 (32%), Positives = 181/351 (51%), Gaps = 11/351 (3%)

Query: 13  LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F   +  V++   L        + ++  +     +    +   +   KE +    D   
Sbjct: 1   MFGKLEEVVKKHEELTGLLGSSEVIKDPKKLIEYNKALNEITPVVEKYKEYKRYSDDLEF 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             E    E D  + +   + ++ I+  +   +       L     D  +  +E+  G GG
Sbjct: 61  TKESLKVEKDHEMKEMLLEEMRDIEEVLPGLEQELRILLLPKDPNDDKNVIIEIRGGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY R+AE+ K+KTE +   +    G+K     I+G  AY  LK E GV
Sbjct: 121 DEAALFAANLYRMYCRYAERNKWKTEVMSKSEVGVGGLKEIVFSIQGQGAYSKLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS +++ V P VDD  ++EI  S+ +IDT+R+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESSGRIHTSTATVAVLPEVDDVEQVEIKPSELKIDTFRSSGAGGQHVNTTD 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+P+GV+V+CQ ERSQ KN+ +A  +L  KL+E+E++K+        + K ++G
Sbjct: 241 SAVRITHLPSGVIVECQDERSQLKNREKAMKVLATKLFEMEIEKQRSEVE--STRKLQVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   + D R  +        LDGDL + + A +   +
Sbjct: 299 TGSRSEKIRTYNY-PQGRITDHRIKLTLHKLDAFLDGDLTEMIDALITFDQ 348


>gi|320335022|ref|YP_004171733.1| peptide chain release factor 2 [Deinococcus maricopensis DSM 21211]
 gi|319756311|gb|ADV68068.1| Peptide chain release factor 2 [Deinococcus maricopensis DSM 21211]
          Length = 363

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 146/353 (41%), Positives = 216/353 (61%), Gaps = 6/353 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +L  L    D     +RL+ L+ + EDP+LW +   A+ + +E   L         
Sbjct: 3   ELLEKLAALREYLDIPGKTRRLNELDKELEDPNLWNDQERARRVTQEATTLRRVTEGYAS 62

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +         +L++A +++     +   +    I+  V+    E+L + +     A + +
Sbjct: 63  LSSDAQGLSEMLDIASDDEK----EMLEEEQASIQQRVDDLYRETLFTMKHSEAPAIIRI 118

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGGTESQDWA ML+RMY RWAE+R FKTE L+  DGE+AGI SA  +++G  AYG +
Sbjct: 119 KSGAGGTESQDWAGMLMRMYIRWAERRGFKTEILDQQDGEQAGITSAEFIVRGDRAYGMM 178

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGG 240
             E GVHRLVR+SP+DSN+RRHTSF+S+ + P   ++ I+I + +SD R+D YR+ GAGG
Sbjct: 179 APEHGVHRLVRVSPFDSNNRRHTSFASVDIVPEVPEEQIDIHVPDSDVRVDVYRSQGAGG 238

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+TH+PTG++V  Q  RSQ KN+  A+ +L+ +LY++E++KRE       
Sbjct: 239 QGVNTTDSAVRVTHLPTGLMVAIQVTRSQIKNREMAFQILKQRLYDIEVKKREAEEMKAR 298

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             +  I WG QIRSYVL     VKD RT + +    +VLDGD++++M A L  
Sbjct: 299 GEQKAIEWGSQIRSYVLDKQ-YVKDHRTGVMRHDTGNVLDGDIEEYMWAGLEW 350


>gi|186477469|ref|YP_001858939.1| peptide chain release factor 1 [Burkholderia phymatum STM815]
 gi|238691299|sp|B2JHK8|RF1_BURP8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|184193928|gb|ACC71893.1| peptide chain release factor 1 [Burkholderia phymatum STM815]
          Length = 360

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 178/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN       +  N+ + + L RE   L   +      +  + D     EL
Sbjct: 9   LDQLTTRLAELNDLLSREDITSNIDQYRKLTREHAELQPVVEQYGLWRQTMNDAATAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +       +E     +          Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 69  LSDASMKDFAEEEIRASRERMETLESELQKMLLPKDPNDDRNIFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE+ +++ E +   + +  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQHKNK +A  +L A++ +   Q  E+ A    + K+ IG G    +
Sbjct: 249 LPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       +++GDLD+ + A ++  +
Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYRLESIMEGDLDELIAALVSEHQ 349


>gi|254701680|ref|ZP_05163508.1| peptide chain release factor 2 [Brucella suis bv. 5 str. 513]
 gi|261752232|ref|ZP_05995941.1| peptide chain release factor 2 [Brucella suis bv. 5 str. 513]
 gi|261741985|gb|EEY29911.1| peptide chain release factor 2 [Brucella suis bv. 5 str. 513]
          Length = 321

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 202/309 (65%), Positives = 257/309 (83%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ L+++I+ I  ++  L D++ L+ +  EE D SI+++    ++ +K E++ +Q +
Sbjct: 1   MRERQQLEDSINGINHLKQTLNDSVELIAMGEEEGDKSIVEDAEKTIRDLKDEIDRRQID 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGEAD+ND YLEVHAGAGGTESQDWA+MLLRMYTRWAE+   K E +E+H+GEEAGI
Sbjct: 61  MLLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+KG N+YG LK E GVHRLVRISPYDSN+RRHTSF+SIWVYPV+DD+IE++++E
Sbjct: 121 KSATILVKGHNSYGMLKTESGVHRLVRISPYDSNARRHTSFASIWVYPVIDDNIEVQVTE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+ +AW+MLRA+LY
Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE  +   ++KT+IGWG QIRSYVLQPYQ+VKDLRT +E T+P +VLDG +  
Sbjct: 241 EEELKKREEATDAANATKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTP 300

Query: 346 FMKATLAIK 354
           FM+A L  +
Sbjct: 301 FMEAALDHR 309


>gi|253997606|ref|YP_003049670.1| peptide chain release factor 1 [Methylotenera mobilis JLW8]
 gi|253984285|gb|ACT49143.1| peptide chain release factor 1 [Methylotenera mobilis JLW8]
          Length = 360

 Score =  230 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 180/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             N  +RL  ++       +  N+   + L RE   +   +   +  +    D      +
Sbjct: 9   LANLSERLDEIDRLMSSEGITDNMDNYRKLTREHAEITPIVEQYRAFEQTEADINEAQTM 68

Query: 76  ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +  +  QE  +  +   +      Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 69  LNDPEMKAFAQEEIEAGKAKLEAIEAALQTLLLPKDPNDDKNIFLEIRAGTGGDESGLFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE++ +K E +  ++GE  G K     I+G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLYRMYSRYAERQGWKVEVMSANEGEMGGYKEIIAKIEGYGAYSKLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ + P  D+  ++ I+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 189 DTETQGRIHTSACTVAILPEADEVSDVVINPADVRIDTFRASGAGGQHINKTDSAVRLTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            PTG+VV+CQ+ RSQH NKAQA+ +L A++   ++ +++  + I    K+ IG G    +
Sbjct: 249 APTGIVVECQEGRSQHANKAQAFAVLAARIKAKQVDEQQ--SKIASERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       + +GD+D+ + A  A  +
Sbjct: 307 IRTYNY-PQGRITDHRINLTLYKIDAITEGDMDELIGALAAEHQ 349


>gi|219682342|ref|YP_002468726.1| peptide chain release factor 2 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219622075|gb|ACL30231.1| peptide chain release factor 2 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
          Length = 349

 Score =  230 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 161/346 (46%), Positives = 238/346 (68%), Gaps = 1/346 (0%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
             L G+FD++    R+  ++ +   P  W   I  K L +E+  L++ I  I EI++ + 
Sbjct: 3   KILRGIFDYNKKKSRVLEIDLELSSPKTWTEQISIKKLNKEKYLLNSIIQNINEIEENIK 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + +I LELA+E  D  + +E+   +Q+I+ E++  +F  + S + D  D Y+++ +G+GG
Sbjct: 63  EVVIFLELAIETQDNLVFKESLLEIQKIEQEIKKLEFYRMFSKKDDHYDCYIDIQSGSGG 122

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           T++QDW+ MLLRMY RWA+K+ F TE ++   GE  GIKS+T+ + G  A+GW + E G+
Sbjct: 123 TDAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIKSSTIKVSGEYAFGWFRTETGI 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRL+R SP+DS  RRHTSFSSI++YP +++ I+I I+ SD RID YRASGAGGQHVN T+
Sbjct: 183 HRLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYSDLRIDVYRASGAGGQHVNRTE 242

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PT +V QCQ  RSQHKNK QA   +++KLYE++++K++E     E +K++I 
Sbjct: 243 SAVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYEIQMRKKQEEKQKIEQNKSDIT 302

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSY+L     +KDLRT +EK     VLDGDLDDF++ +L +
Sbjct: 303 WGNQIRSYILD-NSKIKDLRTGVEKNHVQSVLDGDLDDFIEQSLIM 347


>gi|303248208|ref|ZP_07334471.1| peptide chain release factor 1 [Desulfovibrio fructosovorans JJ]
 gi|302490346|gb|EFL50257.1| peptide chain release factor 1 [Desulfovibrio fructosovorans JJ]
          Length = 357

 Score =  230 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 113/350 (32%), Positives = 175/350 (50%), Gaps = 11/350 (3%)

Query: 13  LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F   ++  ++   L T+  DP +  +    + L +    L   +   +E +    D   
Sbjct: 1   MFAKLESLERKYVDLETQLSDPAVVGDQERYRKLAKAHADLAEVVEAFREHKRLSRDLEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
             ELA + D        ++     +         +   L     D  +  LE+ AG GG 
Sbjct: 61  NTELAQDPDPEMRELALAEVRTIREALPELEARLKLLLLPKDPMDEKNILLEIRAGTGGE 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AE +++K E +   +    G K     I G   Y  LK E G H
Sbjct: 121 EAALFAGDLFRMYSRYAETKRWKVEIMSSSETGSGGFKEVIANISGDKVYSRLKYESGAH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ + P   + +++ I  +D RID YR+SG GGQ VNTTDS
Sbjct: 181 RVQRVPATESQGRIHTSAVTVAIMP-EAEEVDVAIDPNDLRIDVYRSSGPGGQSVNTTDS 239

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+THIPTG+VV CQ E+SQHKNKA+A  +LR++L + E +K+        S ++++G 
Sbjct: 240 AVRVTHIPTGLVVICQDEKSQHKNKAKALKVLRSRLLQAEQEKQRLEQE--ASRRSQVGS 297

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G    +IR+Y   P   V D R N+       VL+GDLD+     +A  +
Sbjct: 298 GDRSERIRTYNF-PQSRVTDHRINLTLYKLEAVLEGDLDELFDGLIAHYQ 346


>gi|326790732|ref|YP_004308553.1| peptide chain release factor 1 [Clostridium lentocellum DSM 5427]
 gi|326541496|gb|ADZ83355.1| peptide chain release factor 1 [Clostridium lentocellum DSM 5427]
          Length = 357

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 113/351 (32%), Positives = 171/351 (48%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD     V +   +  +   P +  +    + LM+E   L   +   +E +  L     
Sbjct: 1   MFDQLQELVDKYHIIGDQISQPEVIADQERWQKLMKEHSDLKEIVEKYEEYKATLEAIDE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            L +  +  D    +   + L   K  VE  +       L     D  +  +E+  GAGG
Sbjct: 61  ALMMLDDNLDDDFRELVKEELAENKKRVEPLENEIKLLLLPKDPNDDKNVIMEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY  +AE  ++KTE + +++    G K    ++KG  AY  LK E GV
Sbjct: 121 DEAALFAAELYRMYCYYAESHRWKTELMSLNENGIGGFKEVIFMVKGQGAYSKLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS  ++ V P  ++     +  +D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRIPATESGGRIHTSTVTVAVMPEAEELDVQ-LDMNDVRIDVCRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR  H+PTG++V CQ E+SQ KNK +A  +LR +L++LE  K    A +    K+ +G
Sbjct: 240 SAVRALHVPTGLMVYCQDEKSQLKNKEKALKILRTRLFDLEQAK--AHAEMAAEKKSLVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       VLDGDL++ +     + +
Sbjct: 298 TGDRSERIRTYNF-PQGRVTDHRVGLTLHKLEQVLDGDLEEIISTLTTVDQ 347


>gi|257092416|ref|YP_003166057.1| peptide chain release factor 1 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257044940|gb|ACV34128.1| peptide chain release factor 1 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 360

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 184/344 (53%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   RL  L+         +++ E + L RE   +   ++  +       D    L++
Sbjct: 9   LEHLTGRLDELDRMLASGDATRDMDEYRRLSREHAEIAPVVALYQIWSRTRSDLAAALDM 68

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +      +       +  Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 69  VGDPEMRELAEAEVAASKERLPQIEKDLQKLLLPRDAKDERNVFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+AE+R+++ E +     +  G +     I G + Y  LK E G HR+ R+ 
Sbjct: 129 GNLFRMYTRYAERRRWQVEVISASASDLGGYREIIARIIGSDVYARLKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D   E++++ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 DTEAQGRIHTSACTVAVMPEADALEEVQVNPADIRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTGVVV+CQ +RSQHKNKAQA ++L A++ +  +Q+RE+ A+I    ++ +G G    +
Sbjct: 249 LPTGVVVECQDDRSQHKNKAQAMSVLVARIRD--MQEREQDASIASERRSLVGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       ++DGDLD+ + A  A  +
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKIDAIMDGDLDELLGALTAEHQ 349


>gi|206558779|ref|YP_002229539.1| peptide chain release factor 1 [Burkholderia cenocepacia J2315]
 gi|238693068|sp|B4E6U6|RF1_BURCJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|198034816|emb|CAR50684.1| peptide chain release factor 1 [Burkholderia cenocepacia J2315]
          Length = 360

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 117/346 (33%), Positives = 175/346 (50%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72
            D    RL+ LN      ++  ++ + + L RE   L   +      +    D      L
Sbjct: 9   LDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRSDEAAAQEL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L      D       ++            K          D  + +LE+ AG GG ES  
Sbjct: 69  LADPSMRDFAEDEIRSAREGMARLETELQKMLL--PKDPNDDRNIFLEIRAGTGGDESAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R
Sbjct: 127 FAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV+CQ +RSQHKNK +A  +L A++ +   Q  E+ A    + K+ IG G   
Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N+       ++DGDLD+ + A +   +
Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELIGALVTEHQ 349


>gi|226942019|ref|YP_002797093.1| PrfA [Laribacter hongkongensis HLHK9]
 gi|254790885|sp|C1D5R7|RF1_LARHH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226716946|gb|ACO76084.1| PrfA [Laribacter hongkongensis HLHK9]
          Length = 359

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 173/344 (50%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  +     DP + +++   + L RE   L   +      +    D     +L
Sbjct: 9   LAQLSDRLDEVTGLLGDPDVTRDMDAYRRLTREHAELTPVVEQYLAWRQTEADLASARDL 68

Query: 76  ALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +    + Q          Q   L     D  + +LEV AG GG E+  +A
Sbjct: 69  LDDPDMKELAEAELSDGQERLAVLELELQKLLLPKDPNDERNIFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE+ +++ E +   + +  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 ADLFRMYSRYAERNRWQVEIVSASENDLGGFKEVIARIVGFGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+   +E++ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 189 ATETQGRIHTSACTVAVMPEADELAAVELNPADLRIDTFRASGAGGQHINKTDSAVRVTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQHKNKA+A  +L A++ ++  Q+R          K+ IG G    +
Sbjct: 249 LPTGIVVECQDDRSQHKNKARALAVLAARIQDV--QQRARQQKEAAERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       V+DGDL +   A  A  +
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDAVMDGDLAELTDALTAEHQ 349


>gi|242309101|ref|ZP_04808256.1| peptide chain release factor 2 [Helicobacter pullorum MIT 98-5489]
 gi|239524525|gb|EEQ64391.1| peptide chain release factor 2 [Helicobacter pullorum MIT 98-5489]
          Length = 364

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 170/350 (48%), Positives = 232/350 (66%), Gaps = 4/350 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +   +  +        R+  + T  +    W++  +A    +E++  +  +   +E
Sbjct: 12  ELEIKRQNIEKIMQPSKLEARIKEIETLEQQKEFWEDSKKAGEYQKEKKRCERQLEKFQE 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
               L D   L E++ +++       +  N    + +++  + E +LS E DSN+A   +
Sbjct: 72  ANLALNDAKELFEISSDDEQTLNELFSEANSL--EEQIKKAEIEVMLSDELDSNNAIFTI 129

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
             GAGGTESQDWA+ML RMY RWAE+R FK E L+  +G+EAGIK A+ +IKG NAYG+ 
Sbjct: 130 TPGAGGTESQDWASMLYRMYLRWAERRGFKVELLDYQEGDEAGIKDASFIIKGENAYGYA 189

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVRISP+DSN++RHTSF+S+ V P +DD+IEIEI E D RIDTYRASGAGGQ
Sbjct: 190 KVENGIHRLVRISPFDSNAKRHTSFASVQVTPEIDDNIEIEIEEKDLRIDTYRASGAGGQ 249

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N T+SA+RITHIPTG+VVQCQ +RSQHKNKA A  ML++KLYELE QKR E       
Sbjct: 250 HINKTESAIRITHIPTGIVVQCQNDRSQHKNKATALKMLKSKLYELEAQKRNE--QTSND 307

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            K+EIGWG QIRSYVL PYQ +KDLR+NI  ++   +LDGD+D  ++  L
Sbjct: 308 DKSEIGWGHQIRSYVLAPYQQIKDLRSNIAYSNVEAILDGDIDAILEGVL 357


>gi|167031789|ref|YP_001667020.1| peptide chain release factor 1 [Pseudomonas putida GB-1]
 gi|189039985|sp|B0KNE4|RF1_PSEPG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166858277|gb|ABY96684.1| peptide chain release factor 1 [Pseudomonas putida GB-1]
          Length = 360

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 121/346 (34%), Positives = 174/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++   +  KE      D      L
Sbjct: 9   LDILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWCKVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE---VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +  +  +         Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LKDSDPDLREMAVEEVREAKEQLLTLESQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AEKR ++ E L  ++GE  G K     ++G N YG LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYRASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ+ERSQHKN+A+A + L AKL +  +Q       I    K  +G G   
Sbjct: 249 THLPTGIVVECQEERSQHKNRARAMSWLSAKLND--MQTSAAQNAIASERKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+   S  D+L G ++  ++  LA  +
Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYSLDDILSGGVEAVIEPLLAEYQ 351


>gi|293375558|ref|ZP_06621832.1| peptide chain release factor 1 [Turicibacter sanguinis PC909]
 gi|325836776|ref|ZP_08166243.1| peptide chain release factor 1 [Turicibacter sp. HGF1]
 gi|292645775|gb|EFF63811.1| peptide chain release factor 1 [Turicibacter sanguinis PC909]
 gi|325491154|gb|EGC93443.1| peptide chain release factor 1 [Turicibacter sp. HGF1]
          Length = 354

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 104/350 (29%), Positives = 187/350 (53%), Gaps = 11/350 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           +F+  +  ++R   +N    DP +  ++ +   L +E++ L+  ++   E ++    + D
Sbjct: 1   MFERLEAILERYEKINEMMADPAIVTDIKKLTELSKEQRGLEETVNVYTEYKNIASSIED 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              + + +  E       E  +   R+    +  +   +     D  +  +E+   AGG 
Sbjct: 61  LKEMAKDSDPEISEMAEMELEELKPRLPELEQQLEILLIPKDPNDEKNVIVEIRGAAGGD 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A+ L RMYT++AE + +K + + +   E  G+     +I G + +  +K E G H
Sbjct: 121 EANIFASDLYRMYTKYAELKGWKIQVMNVDYSESGGMSQVEFMISGESVFSHMKYESGAH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS +++ V P   + ++IE+S +D R+DT+ +SG GGQ VNTT S
Sbjct: 181 RVQRVPATESQGRIHTSTATVLVMP-EAEDVDIEVSMNDIRVDTFCSSGPGGQSVNTTKS 239

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+TH+PTG+VV CQ  +SQH+NKA A  +L+A++Y+  LQ+R E    GE  +++IG 
Sbjct: 240 AVRLTHVPTGIVVSCQDGKSQHENKANALKVLKARIYDSILQERLE--AEGEERRSKIGT 297

Query: 309 GRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G +   IR+Y   P   V D R          V++G L+  ++A +  ++
Sbjct: 298 GERSEKIRTYNY-PQNRVTDHRIGFTIQQLDRVMEGKLEPVIEALITEEQ 346


>gi|107024140|ref|YP_622467.1| peptide chain release factor 1 [Burkholderia cenocepacia AU 1054]
 gi|116688534|ref|YP_834157.1| peptide chain release factor 1 [Burkholderia cenocepacia HI2424]
 gi|170731835|ref|YP_001763782.1| peptide chain release factor 1 [Burkholderia cenocepacia MC0-3]
 gi|254246465|ref|ZP_04939786.1| Peptide chain release factor 1 [Burkholderia cenocepacia PC184]
 gi|119361514|sp|Q1BSB1|RF1_BURCA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223531|sp|A0K437|RF1_BURCH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238688554|sp|B1JUS4|RF1_BURCC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|105894329|gb|ABF77494.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia
           cenocepacia AU 1054]
 gi|116646623|gb|ABK07264.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia
           cenocepacia HI2424]
 gi|124871241|gb|EAY62957.1| Peptide chain release factor 1 [Burkholderia cenocepacia PC184]
 gi|169815077|gb|ACA89660.1| peptide chain release factor 1 [Burkholderia cenocepacia MC0-3]
          Length = 360

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 117/346 (33%), Positives = 175/346 (50%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72
            D    RL+ LN      ++  ++ + + L RE   L   +      +    D      L
Sbjct: 9   LDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRSDETAAQEL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L      D       ++            K          D  + +LE+ AG GG ES  
Sbjct: 69  LADPSMRDFAEDEIRSAREGMARLETELQKMLL--PKDPNDDRNIFLEIRAGTGGDESAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R
Sbjct: 127 FAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV+CQ +RSQHKNK +A  +L A++ +   Q  E+ A    + K+ IG G   
Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N+       ++DGDLD+ + A +   +
Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELIGALVTEHQ 349


>gi|311693603|gb|ADP96476.1| peptide chain release factor 1 [marine bacterium HP15]
          Length = 362

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 117/338 (34%), Positives = 182/338 (53%), Gaps = 9/338 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   ++    D  +     + + L RE   ++  +   +  Q  L D     EL
Sbjct: 9   LEQLSDRFEEVSALLSDSSIISQQDKFRDLSREFAEIEPIVHCFQAWQHSLDDIEAAREL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN---DAYLEVHAGAGGTESQD 132
           A + D         +     +   E  +    L    D N   + +LE+ AG GG E+  
Sbjct: 69  AKDGDADMREMAEEELQLAEQKSEELDEELQRLMLPKDPNDGKNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY R+AE+R+++ E L   +GE  G K     + G   YG LK E G HR+ R
Sbjct: 129 FAGDLFRMYLRYAERRRWQVEVLSESEGEHGGFKELIARVAGDGVYGALKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D++  IE++++D R+DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVAVMPEADEAEAIELNKADLRVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ+ERSQHKN+A+A ++L ++L   E ++++   ++ E+ K+ +G G   
Sbjct: 249 THLPTGIVVECQEERSQHKNRAKALSLLASRLQNAETERQQ--KSMAETRKSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            +IR+Y   P   V D R N+      +V+ GDLD  +
Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYKLDEVIAGDLDAVV 343


>gi|167620578|ref|ZP_02389209.1| peptide chain release factor 1 [Burkholderia thailandensis Bt4]
          Length = 360

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 176/346 (50%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72
            D    RL+ LN      ++  ++ + + L RE   +   +    + +    D      L
Sbjct: 9   LDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQEL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L  A   D        +                       D  + ++E+ AG GG ES  
Sbjct: 69  LADASMRDFAEDELRGARERMSRLAAELQTMLL--PKDPNDERNIFVEIRAGTGGDESAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R
Sbjct: 127 FAGDLLRMYLRYAERQRWQVEMMSESASDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV+CQ +RSQHKNK +A  +L A++ +   Q  E+ A    + K+ IG G   
Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N+       ++DGDLD+ + A ++  +
Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVSEHQ 349


>gi|167764194|ref|ZP_02436321.1| hypothetical protein BACSTE_02578 [Bacteroides stercoris ATCC
           43183]
 gi|167698310|gb|EDS14889.1| hypothetical protein BACSTE_02578 [Bacteroides stercoris ATCC
           43183]
          Length = 372

 Score =  230 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 132/358 (36%), Positives = 206/358 (57%), Gaps = 11/358 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D +    ++     +T+ P  W +   A+  M++ + L   IS   E+
Sbjct: 10  IKERTEALNRYLDIEGKKIQVEEEQLRTQAPGFWDDQKAAEAQMKKVKGLQQWISGYNEV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +     D+    +E  +   +    VE  + +++L  EAD  D  L+++
Sbjct: 70  KVLADELQLAFDFYK--DELVTEEEVDEAYAKASAAVEALELKNMLREEADQMDCVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA+ML+RMY R+AE   +K     + +G+EAGIK+ T+ I G  AYG+LK
Sbjct: 128 SGAGGTESQDWASMLMRMYLRYAETHGYKATISNLQEGDEAGIKTCTIEISGDYAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+ I ++    DT+R+SGAGGQ+
Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVNIEQARISWDTFRSSGAGGQN 247

Query: 243 VNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  +S VR+ +            ++++  + R Q KN+  A   LR+ LY+ ELQ R  
Sbjct: 248 VNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMA 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L 
Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFVKAYLM 364


>gi|224101237|ref|XP_002312196.1| predicted protein [Populus trichocarpa]
 gi|222852016|gb|EEE89563.1| predicted protein [Populus trichocarpa]
          Length = 379

 Score =  230 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 139/354 (39%), Positives = 211/354 (59%), Gaps = 3/354 (0%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           S+++  +          Q L+ L +K  D  LW +  +A+  +     + + I  + E +
Sbjct: 15  SQRVEEMRASSGLHLLEQELADLESKAADSSLWDDRAKAQETLLALTDVKDKIKLLAEFK 74

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSNDAYLEV 121
            ++ +   +++L  E D               +    ++  +   LLSG  D   A L +
Sbjct: 75  TKVEEAETIVKLTEEMDSTDAGFLEEATGIIKELNKALDKYELTQLLSGPYDKEGAVLSI 134

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGT++QDWA+MLLRMY RW EK+++KT+ +E   GEEAGIKSAT+ ++G  AYG+L
Sbjct: 135 TAGAGGTDAQDWADMLLRMYVRWGEKQRYKTKVVESSPGEEAGIKSATVEVEGRYAYGYL 194

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGG 240
            GE+G HR+VR SP++S   R TSFS + V P+  ++S+++E+ E D  I T RA G GG
Sbjct: 195 SGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEESMDVELPEEDLEISTSRAGGKGG 254

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN  ++AVRITHIPTGV V+C +ERSQ  NK +A + L+AKL  +  ++R        
Sbjct: 255 QNVNKVETAVRITHIPTGVTVRCTEERSQLSNKIKALSRLKAKLLVIAEEQRASEIKQIR 314

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               +  WG+QIR+YV  PY++VKD+RT  E +  + V+DG+LD F++A L  K
Sbjct: 315 GDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIASVMDGELDPFIRAYLKHK 368


>gi|237740862|ref|ZP_04571343.1| peptide chain release factor 2 [Fusobacterium sp. 4_1_13]
 gi|229431159|gb|EEO41371.1| peptide chain release factor 2 [Fusobacterium sp. 4_1_13]
          Length = 331

 Score =  230 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 149/329 (45%), Positives = 218/329 (66%), Gaps = 1/329 (0%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
              T + + W +  ++  +++      N +S  +++   + D  +L++     +     +
Sbjct: 2   EKLTFEENFWSDKRKSSEIIKNMNFEKNIVSRYEKLATEIDDEEVLIDFVESGEASFENE 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
                 + +K ++E  +   LL GE D N+A + +H+GAGGTE+ DWA+ML RMY RW  
Sbjct: 62  -LQTKHKILKSDIEEFEINLLLDGEYDMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCN 120

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            + +K   L+  +G+  G+KS T L++G NAYG+LK E+GVHRLVRISP+D+N +RHTSF
Sbjct: 121 LKGYKVSELDFMEGDSVGVKSVTFLVEGINAYGYLKSEKGVHRLVRISPFDANKKRHTSF 180

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S+ V P VD+++E+EI+ +D RIDTYRASGAGGQHVN TDSAVRITH P+G+VV CQ+E
Sbjct: 181 ASVEVVPEVDENVEVEINPADIRIDTYRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKE 240

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQ  N+  A  ML++KL ELE++K+EE     +  +++IGWG QIRSYV QPY +VKD 
Sbjct: 241 RSQLSNRETAMKMLKSKLLELEIKKKEEEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDH 300

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           RTN E  +   V+DG +DDF+ + L   K
Sbjct: 301 RTNTEIGNVKAVMDGSIDDFINSYLRWIK 329


>gi|322832986|ref|YP_004213013.1| peptide chain release factor 1 [Rahnella sp. Y9602]
 gi|321168187|gb|ADW73886.1| peptide chain release factor 1 [Rahnella sp. Y9602]
          Length = 360

 Score =  230 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 114/337 (33%), Positives = 172/337 (51%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +  + + L RE   L          +    D      +
Sbjct: 9   LEALQERHEEVQAMLGDAGVIADQDKFRSLSREYSQLTAVSECFLAWRQAQEDLETAEMM 68

Query: 76  ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+     +  I+   E  Q   L     D    +LE+ AG GG E+  +A
Sbjct: 69  LDDPEMREMAQDEIKECKANIEELEEKLQVLLLPKDPDDERGCFLEIRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +GE  G K     I G  AYG  K E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEMRRWRVEIVSASEGEHGGYKEVIAKISGEGAYGQFKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVMPEIPEAELPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR+       + +  +G G    +
Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVAKRQAE--EASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTIYRLDEVMEGKLDSLIQ 342


>gi|193214860|ref|YP_001996059.1| peptide chain release factor 1 [Chloroherpeton thalassium ATCC
           35110]
 gi|238692722|sp|B3QYI4|RF1_CHLT3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|193088337|gb|ACF13612.1| peptide chain release factor 1 [Chloroherpeton thalassium ATCC
           35110]
          Length = 358

 Score =  230 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 113/352 (32%), Positives = 183/352 (51%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   +   R   +  +  DP +  N  + + L +E   L   +    E +        
Sbjct: 1   MFDQLQSIKDRYKEIEKQLSDPGVISNQDKFRQLNKEYSGLSEIVKAYDEYRKAKDALQQ 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             EL   E D  + +    +      +V   +       L   EADS +A +E+ AGAGG
Sbjct: 61  SKELLYTESDPEMKELAQADYDEYSEKVPELEQQLKILLLPKEEADSRNAMVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDG-EEAGIKSATLLIKGPNAYGWLKGEQG 186
            E+  +A  LLRMY R+AE+  +K E L+ ++     G K AT+ + G + YG +K E G
Sbjct: 121 DEAALFAADLLRMYQRFAERNGWKCEVLDYNESSGLGGFKEATISLSGDDVYGTMKFESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +S+ V P  +D     I + D ++DTYR+ G GGQ+VN  
Sbjct: 181 VHRVQRVPETETQGRVHTSAASVAVLPEAEDFDIE-IRKEDLQMDTYRSGGKGGQNVNKV 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++AVRITH+P+G+VV CQ+ERSQ +N+ +A  MLR+KLY+++L ++++        ++ +
Sbjct: 240 ETAVRITHVPSGIVVACQEERSQLQNRERAMKMLRSKLYDIKLAEQQKERADL--RRSMV 297

Query: 307 GWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             G +   IR+Y   P   V D R      +   +LDGDL + ++A     +
Sbjct: 298 STGDRSAKIRTYNF-PQSRVTDHRIGFTTHALPQLLDGDLFEIIEALRVHDQ 348


>gi|166363701|ref|YP_001655974.1| peptide chain release factor 2 [Microcystis aeruginosa NIES-843]
 gi|166086074|dbj|BAG00782.1| peptide chain release factor 2 [Microcystis aeruginosa NIES-843]
          Length = 330

 Score =  230 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 140/322 (43%), Positives = 214/322 (66%), Gaps = 1/322 (0%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL 92
           P  W N+  A+  ++E     +++   +    +L D   ++EL   E D ++L+E +DNL
Sbjct: 5   PTFWDNLDTAQKTLQELNECKSSLETYQGWCGQLEDTKAIIELLELESDRTLLEEATDNL 64

Query: 93  QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
             ++ +++  + + LL+G  D+  A L ++AGAGGT++QDW  MLLRMY+RWAEK+ +K 
Sbjct: 65  THLQHDLDRWELQQLLNGPYDAKGAVLTINAGAGGTDAQDWTEMLLRMYSRWAEKQGYKV 124

Query: 153 EALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
              EI +G+EAGIKS T+ I G  AYG+LKGE+G HRLVRISP+++N +R TSF+ + V 
Sbjct: 125 TLAEISEGDEAGIKSVTIEIAGTYAYGYLKGEKGTHRLVRISPFNANGKRQTSFAGVEVM 184

Query: 213 PV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
           P+  DD++ +EI + D  I T R+ G GGQ+VN  ++AVR+ H+PTG+ V+C QERSQ +
Sbjct: 185 PILGDDAVRVEIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAVRCTQERSQLQ 244

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           NK +A  +L+AKL  +  +++ +          E  WG QIR+YV  PYQ+VKDLR+N+E
Sbjct: 245 NKEKALALLKAKLLIIAREQQAQAIAEIRGDMVEAAWGNQIRNYVFHPYQLVKDLRSNVE 304

Query: 332 KTSPSDVLDGDLDDFMKATLAI 353
            T  + V++GDLD F++A L +
Sbjct: 305 TTDVTRVMNGDLDSFIEAYLRL 326


>gi|153814569|ref|ZP_01967237.1| hypothetical protein RUMTOR_00783 [Ruminococcus torques ATCC 27756]
 gi|317501267|ref|ZP_07959471.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|145848063|gb|EDK24981.1| hypothetical protein RUMTOR_00783 [Ruminococcus torques ATCC 27756]
 gi|316897334|gb|EFV19401.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           8_1_57FAA]
          Length = 316

 Score =  230 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 149/308 (48%), Positives = 216/308 (70%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+E + L +++  I+++     D ++L+E++ EED     +E  + LQ+ +   E  +  
Sbjct: 1   MKELKGLQDSVKEIEKLYSDYEDMMLLIEMSEEEDSEETAEEIEEELQQFEETFEELRIG 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LL+G  D ++A + +HAGAGGTES DW  ML RMYTRWAEK+ +  E L+  +G+ AG+
Sbjct: 61  TLLTGPYDRDNAIVTLHAGAGGTESCDWTGMLYRMYTRWAEKKGYSIEELDYLEGDVAGV 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K  T  +KG NAYG+L+ E+GVHRLVRISP++S  +R TSF+S  V P +++ I+IEI++
Sbjct: 121 KGVTFEVKGENAYGYLRSEKGVHRLVRISPFNSAGKRQTSFASCDVIPDIEEDIDIEIND 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D +IDTYR+SGAGGQH+N T SAVRITH+PTG+VVQCQ ERSQH NK +A  ML++KLY
Sbjct: 181 DDLKIDTYRSSGAGGQHINKTSSAVRITHLPTGIVVQCQNERSQHMNKDKAMQMLKSKLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            ++ Q++ E  +       +I +G QIRSYV+QPY MVKD RTN E ++   V+DG++D 
Sbjct: 241 LMKQQEQAEKMSDIRGEVRDINFGNQIRSYVMQPYTMVKDHRTNAEVSNVGGVMDGNIDP 300

Query: 346 FMKATLAI 353
           F+ A L+ 
Sbjct: 301 FINAYLSA 308


>gi|302875888|ref|YP_003844521.1| peptide chain release factor 1 [Clostridium cellulovorans 743B]
 gi|307689321|ref|ZP_07631767.1| peptide chain release factor 1 [Clostridium cellulovorans 743B]
 gi|302578745|gb|ADL52757.1| peptide chain release factor 1 [Clostridium cellulovorans 743B]
          Length = 358

 Score =  230 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 126/348 (36%), Positives = 186/348 (53%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    +   L+ K  DP +  N  E + L +E   L   ++  KE +  + D     E+
Sbjct: 5   LNFIENKYDELSIKISDPSIMSNQKEWQKLCKEHSDLGIVVNKYKEYKKTIEDIEDNKEM 64

Query: 76  ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +      L+E +    +          E  +   L     D  + Y+E+ AGAGG E+
Sbjct: 65  IQDGSLDPELKELASEEIKELEILKNKYEEELRILLLPKDPNDDKNVYVEIRAGAGGEEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +AN L RMY R+AE    + E + I+  +  GIK   ++IKG  AY  LK E GVHR+
Sbjct: 125 ALFANNLTRMYARYAETHGCRVETISINPTDLGGIKEIVMMIKGTGAYSKLKYESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S+ R HTS +++ + P   D +EIEIS +D RID +RASG GGQ VNTTDSAV
Sbjct: 185 QRVPDTESSGRIHTSTATVAIMP-EVDDVEIEISANDLRIDVFRASGHGGQCVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VV CQ E+SQ KNK +A N+L+A+L+E    +R   A+I E  K+++G G 
Sbjct: 244 RITHLPTGIVVSCQDEKSQLKNKEKALNVLKARLFEKAESER--SASIAEDRKSQVGTGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +        LDG +D+ + A +   +
Sbjct: 302 RSERIRTYNY-PQGRVTDHRIGLTLYKLDSFLDGAIDEVINALITEDQ 348


>gi|291561383|emb|CBL40182.1| bacterial peptide chain release factor 1 (bRF-1)
           [butyrate-producing bacterium SS3/4]
          Length = 357

 Score =  230 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 115/351 (32%), Positives = 189/351 (53%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D+ ++    L  +  +P + ++  + + LM+E+  L   +   K+ +    D   
Sbjct: 1   MFDRLDDMLRHYEELMLELNNPSVAEDQRKFRKLMKEQADLAPIVDAYKQYKQAKQDVED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            L L  EE D  + +   + L   K  +E  +       L     D  +  +E+ AGAGG
Sbjct: 61  SLALLDEESDEEMKELAKEELADAKKRIEELEQELKILLLPKDPNDEKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A+ L RMY  +AE + +KTE + + +    G+K    +I G  AY  LK E GV
Sbjct: 121 DEAALFASELYRMYVHYAESQHWKTEMINVSESGIGGMKEVEFMITGHGAYSKLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ + P  ++   + I + D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAIMPEAEEFDVV-IDDKDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+  Q E+SQ +NK +A+ +LR+KLY++EL++R+         +++IG
Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDMELERRQNE--EAAERRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       ++DGD+ + + + +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLYKIDAIMDGDIQELIDSLIAADQ 347


>gi|229828875|ref|ZP_04454944.1| hypothetical protein GCWU000342_00960 [Shuttleworthia satelles DSM
           14600]
 gi|229792038|gb|EEP28152.1| hypothetical protein GCWU000342_00960 [Shuttleworthia satelles DSM
           14600]
          Length = 357

 Score =  229 bits (584), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 115/351 (32%), Positives = 181/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++ V R   +  +  +P +  +  +   LM+E+  L   +   +  Q +      
Sbjct: 1   MFDKLEDLVARYEEIMRQIAEPDIASDGAKFTELMKEQSELAPIVETFRAYQKQKQSIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            LEL   E D  + Q   + L   +   E  +       L     D  +  +E+  GAGG
Sbjct: 61  SLELLDAESDEEMRQLAKEELAEARASAEELENQLKVLLLPKDSNDDRNVIIEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY  +AE R +  E +E+ +    G+K    +++G  AY  LK E GV
Sbjct: 121 DEAALFAAEVYRMYRHYAESRGWACEVMELEETGIGGMKKINFMVRGRGAYSTLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P     +++ I  +D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPATESGGRIHTSTVTVAVMP-EAQEVDVVIDPADIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NK +A+ +LRAKLY +E+ +++E A+       +IG
Sbjct: 240 SAVRLTHYPTGIVIYSQTEKSQLQNKNKAFALLRAKLYTMEMLRQQEEASAR--RLAQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R N+       +L+GDL + + A +A  +
Sbjct: 298 SGDRSEKIRTYNF-PQGRVTDHRINLTLYKLDKILNGDLQELLDALMAADQ 347


>gi|28210063|ref|NP_781007.1| peptide chain release factor 1 [Clostridium tetani E88]
 gi|32171526|sp|Q898Y5|RF1_CLOTE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|28202498|gb|AAO34944.1| bacterial peptide chain release factor 1 [Clostridium tetani E88]
          Length = 355

 Score =  229 bits (584), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 116/351 (33%), Positives = 201/351 (57%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  +    +   L+ K  DP + Q+  E + L +E   ++  ++  KE ++ L     
Sbjct: 1   MLDRLNFIENKYEELSIKISDPTVMQDQKEWQKLCKEHSDMETIVTTYKEYKEVLQSIED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
             E+  E+ +  +     ++++ ++  V+  + E           D  + ++E+ AGAGG
Sbjct: 61  NKEMLKEDIEQELRDMVQEDIKELEQRVQELEQELKMLLVPKDPNDEKNVFIEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE+  +KTEA+ +++ +  G K    +++G  AY  LK E GV
Sbjct: 121 DEAALFAANLFRMYTRYAERHNWKTEAVSVNETDIGGFKEIVFMVRGKGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS +++ V P   + +++EI+++D R+D YRASG GGQ VNTTD
Sbjct: 181 HRVQRVPDTESSGRIHTSTATVAVLP-EVEDVDVEINQNDLRVDVYRASGHGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+P+G+VV CQ E+SQ KNK +A  +L+++LY++   +R   A+I E  K+++G
Sbjct: 240 SAVRITHLPSGLVVTCQDEKSQLKNKEKAMKVLKSRLYDMLESER--SASIAEDRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +        LDGD+++ +   + +++
Sbjct: 298 TGDRSERIRTYNY-PQGRVTDHRIGLTLYKLESFLDGDIEEMIDGLITVEQ 347


>gi|210623300|ref|ZP_03293717.1| hypothetical protein CLOHIR_01667 [Clostridium hiranonis DSM 13275]
 gi|210153701|gb|EEA84707.1| hypothetical protein CLOHIR_01667 [Clostridium hiranonis DSM 13275]
          Length = 355

 Score =  229 bits (584), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 183/344 (53%), Gaps = 11/344 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
                  L  K  DP +  +    +  M+E   L+  I   +E +  L       E+  E
Sbjct: 8   LEDTYKDLTEKISDPEIINDQKVWQKYMKEHADLEPIIMKYREYKAVLDAIAESKEILQE 67

Query: 79  EDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           E D  + +     L  ++ +     E  +   +     D  +  +E+  GAGG E+  +A
Sbjct: 68  ESDEELRELAKMELSDMESQVEPLEEELKLLLVPKDPNDEKNVIVEIRGGAGGDEAALFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE++ +K   L  ++    G K  + +IKG  AY  LK E GVHR+ RI 
Sbjct: 128 GDLLRMYSRYAERKGWKVSMLSSNETGVGGYKEVSFMIKGKGAYSRLKYESGVHRVQRIP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + +E+EI+++D RID +RASG GGQ VNTTDSAVRITH
Sbjct: 188 STESGGRIHTSTATVAVLP-EVEDVEVEINDNDIRIDVFRASGNGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG VV CQ E+SQ KNK +A  +L+A+LY+  L  +++   I    K+++G G    +
Sbjct: 247 LPTGEVVSCQDEKSQLKNKEKAMKVLKARLYDRALADQQKE--ISAERKSQVGTGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+        LDGD+D+ + A + + +
Sbjct: 305 IRTYNF-PQGRISDHRINLTLYKLDSFLDGDIDEMIDALITVDQ 347


>gi|134302701|ref|YP_001122669.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|134050478|gb|ABO47549.1| Peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 327

 Score =  229 bits (584), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 167/326 (51%), Positives = 227/326 (69%), Gaps = 5/326 (1%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L +++  L+N +   + I + L    +   L L E+D S++QE 
Sbjct: 2   ELEDGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLE--TLSELLELGEEDESLMQEI 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           + + Q +  E+E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 60  AKDTQNVASEIEKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK    ++ DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYP--VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +++ P    D  I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +
Sbjct: 180 VFISPEVDDDIDIDIEINPTDLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSD 239

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +KDL
Sbjct: 240 RSQHKNRDNAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIKDL 298

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLA 352
           RT +E T+   VLDGDLD F++A+L 
Sbjct: 299 RTGVENTNTQAVLDGDLDKFIEASLK 324


>gi|110640072|ref|YP_680282.1| peptide chain release factor 1 [Cytophaga hutchinsonii ATCC 33406]
 gi|119361529|sp|Q11NS4|RF1_CYTH3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|110282753|gb|ABG60939.1| bacterial peptide chain release factor 1 (bRF-1) [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 359

 Score =  229 bits (584), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 103/346 (29%), Positives = 180/346 (52%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   +     DP++  ++     L +E + L+  +    + ++ L +     ++
Sbjct: 5   LEAIKSRFDEVAEAILDPNIMSDMKRYASLNKEYKELNKIVEVYAQYKNILDNIESSKKV 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQF----ESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D    +   + L+ + ++ +  +       +     DS +  LE+  G GG E+ 
Sbjct: 65  LSVEKDPDFREMAKEELETLAVQKDDIELVIKELLIPKDPNDSKNIILEIRGGTGGDEAS 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  + RMY R+ ++  +K E ++  +G   G K     I G + YG LK E GVHR+ 
Sbjct: 125 IFAGDIFRMYQRYCDRMGWKMELIDATEGTSGGYKEIICGISGEDVYGKLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P V++     ++ +D R DT+ +SG GGQ VNTT SA+R
Sbjct: 185 RVPATETQGRIHTSAASVAVLPEVEELDVQ-LNMNDIRKDTFCSSGPGGQSVNTTYSAIR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +THIP+G VVQCQ E+SQ KN  +A  +LR+++YE+E +K+++   +G+   + IG G +
Sbjct: 244 LTHIPSGTVVQCQDEKSQIKNFEKALKVLRSRIYEIEYKKQQDE--LGKERNSMIGSGDR 301

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              IR+Y   P   V D R      +   V+DG++DDF++     +
Sbjct: 302 SDKIRTYNY-PQSRVTDHRIGHTVHNLPAVMDGNIDDFIEELRLAE 346


>gi|89073091|ref|ZP_01159630.1| peptide chain release factor 1 [Photobacterium sp. SKA34]
 gi|89051044|gb|EAR56501.1| peptide chain release factor 1 [Photobacterium sp. SKA34]
          Length = 362

 Score =  229 bits (584), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 113/339 (33%), Positives = 179/339 (52%), Gaps = 9/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72
            +  V+R   +     DP +  +    + L +E   L+      +  Q    D      +
Sbjct: 9   LETLVERYEEVQHLLGDPSVLADQNRFRALSKEYSQLEEVTKCFQAYQQAKEDLVAAEEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +    E      +E  +    I+   +  Q   +     D  + ++E+ AGAGG E+  
Sbjct: 69  AQEDDAEMREMAQEEIKEAKAEIERLADELQVLLIPKDPNDDRNCFVEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AE+R ++ E +  +  E+ G K     + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSKYAERRGWRIEIINENRSEQGGYKEMIAKVNGDGAYGILKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDSA+RI
Sbjct: 189 VPATESQGRVHTSACTVAVLPEIPEAEIPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR        + +  +G G   
Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRNAE--EASTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +IR+Y   P   V D R  +     ++V++GDLD  ++
Sbjct: 307 DRIRTYNY-PQGRVSDHRITLTLYRLNEVMEGDLDALIQ 344


>gi|88800296|ref|ZP_01115863.1| peptide chain release factor 1 [Reinekea sp. MED297]
 gi|88777011|gb|EAR08219.1| peptide chain release factor 1 [Reinekea sp. MED297]
          Length = 361

 Score =  229 bits (584), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 117/346 (33%), Positives = 168/346 (48%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +R   L      P +  +    +   +E   L+N +           D      L
Sbjct: 9   LTELTERYEELGLLLSQPDVISDQTAFRQYSQEYAELENVVQCFSRYTACEADIEAARGL 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             +ED         +        +   E  Q   L     D  + YLEV AG GG E+  
Sbjct: 69  LDDEDPDMREMGKDELASAEALREELDEQLQILLLPKDPNDHKNVYLEVRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AEK  ++ E L   +GE  G K     + G   Y  LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAEKMGWRVEVLSASEGEHGGYKEIISRLSGERVYSQLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI ++D R+DT+RASGAGGQHVN TDSA+R+
Sbjct: 189 VPETESQGRIHTSACTVAVMPEADELESIEIDKNDLRVDTFRASGAGGQHVNKTDSAIRL 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ ERSQHKNKA+A ++L AKL +   Q+        +  K+ +G G   
Sbjct: 249 THLPTGIVVECQDERSQHKNKARAMSLLAAKLKDA--QESAAAREQADQRKSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+      +V+ G LD  ++  L   +
Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYKLDEVIGGQLDHIIQPLLQEHQ 351


>gi|82703754|ref|YP_413320.1| peptide chain release factor 1 [Nitrosospira multiformis ATCC
           25196]
 gi|119361568|sp|Q2Y5P3|RF1_NITMU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|82411819|gb|ABB75928.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrosospira
           multiformis ATCC 25196]
          Length = 358

 Score =  229 bits (584), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 177/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL  LN       +  N+ + + L RER  +   +           D     E+
Sbjct: 9   LTQLSVRLEELNRLLSSESITVNLDQYRKLTRERAEIAPVVDLYNAYLQSEQDIHTAQEM 68

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           A E +          + +          Q + L     D  + +LE+ AG GG ES  +A
Sbjct: 69  AAEAEMREFADAEIRDAKERLVRYGAELQKQLLPKDPNDERNIFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+AE+++++ E +     +  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 ADLFRMYARFAERQRWQVEIISQSPSDVGGYKEIIAKISGEGAYSKLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  ++ ++ ++ RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIEDVALNPAELRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311
           +PTG+VV+CQ  RSQHKNKAQA ++L A++ + ++Q+++  +    + K+ +G G    +
Sbjct: 249 LPTGIVVECQDGRSQHKNKAQAMSVLAARIRDKQMQEQQ--SKQAATRKSLVGTGNRSGR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++DGDL++   A LA  +
Sbjct: 307 IRTYNF-PQGRITDHRINLTLYKIEQIMDGDLNELCSALLAEHQ 349


>gi|325474491|gb|EGC77678.1| peptide chain release factor 2 [Treponema denticola F0402]
          Length = 320

 Score =  229 bits (584), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 162/306 (52%), Positives = 210/306 (68%), Gaps = 1/306 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M E + L N I   +E+ D + D  +L+EL+ E  +  + +E   N   +  + +     
Sbjct: 1   MGEIKALKNRIYPWQELMDEVSDLEVLMELSEESGNEELSEEIGSNYNSVYEKYKKLSIL 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGE D NDAYL VHAGAGGTE+ DWA ML+RMY RW E R FKTE +++ + E  GI
Sbjct: 61  SLLSGEVDKNDAYLTVHAGAGGTEACDWAGMLVRMYLRWCESRGFKTETIDVVEAE-GGI 119

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT  I G  A+G LK E G+HRLVRISP+DSN RRHTSF+S++ +PV+DD+IE++I  
Sbjct: 120 KSATFQISGEFAFGLLKSETGIHRLVRISPFDSNGRRHTSFTSVFAFPVLDDTIEVDIRP 179

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D RIDTYRA GAGGQHVN TDSAVRITHIPTG+VV CQ +RSQ  N+A A N+L+++LY
Sbjct: 180 EDLRIDTYRAGGAGGQHVNKTDSAVRITHIPTGIVVACQTQRSQISNRATAMNVLKSRLY 239

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
               +++E+      + K  I WG QIRSYV QPY MVKD RT  E  +   V+DGD+D+
Sbjct: 240 NYYEEQKEKENMKFAAEKKGISWGNQIRSYVFQPYTMVKDHRTKYETGNIQAVMDGDIDE 299

Query: 346 FMKATL 351
           F+ + L
Sbjct: 300 FINSFL 305


>gi|325662438|ref|ZP_08151044.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|331086228|ref|ZP_08335310.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|325471272|gb|EGC74496.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|330406387|gb|EGG85901.1| peptide chain release factor 2 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 316

 Score =  229 bits (584), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 158/309 (51%), Positives = 221/309 (71%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+E + L +++   +E+  +  D  IL+++A EE+D S+++E    L++I+   E  + E
Sbjct: 1   MKELKSLQDSVKRTEELYRQYEDIQILIDMAYEENDESMIKEIETELKQIESTYEELRIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLS E D ++A + +HAGAGGTE+ DW NML RMY RW E + F TE L+  DG+  GI
Sbjct: 61  TLLSEEYDKDNAIVTLHAGAGGTEACDWVNMLYRMYNRWIESKGFTTEVLDYLDGDITGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T  + G NAYG+L+ E+GVHRLVRISP++S ++R TSF+S  V P ++D I+IEI+E
Sbjct: 121 KTVTFEVNGENAYGYLQSEKGVHRLVRISPFNSANKRQTSFASCDVVPDLEDDIDIEINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            + +IDTYRASGAGGQHVN T SA+R+TH+PTG+VVQCQ ERSQH NK +A  ML+AKLY
Sbjct: 181 DELKIDTYRASGAGGQHVNKTSSAIRLTHLPTGIVVQCQNERSQHSNKEKAMQMLKAKLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            L+ Q++ E  +       EIG+G QIRSYV+QPY +VKD RTN E  + + VLDG+LD 
Sbjct: 241 LLKEQEQAEKVSGIRGEVKEIGFGNQIRSYVMQPYTLVKDHRTNEESGNVTSVLDGNLDP 300

Query: 346 FMKATLAIK 354
           F+ A L ++
Sbjct: 301 FINAYLKMR 309


>gi|197120814|ref|YP_002132765.1| peptide chain release factor 1 [Anaeromyxobacter sp. K]
 gi|238689845|sp|B4UAY8|RF1_ANASK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|196170663|gb|ACG71636.1| peptide chain release factor 1 [Anaeromyxobacter sp. K]
          Length = 370

 Score =  229 bits (584), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 113/341 (33%), Positives = 187/341 (54%), Gaps = 10/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72
            +   QR   L     DP +  N    + + +ER  ++  ++ ++  +  L D   N  L
Sbjct: 10  LEAIEQRFEELTQLLSDPAVAGNGDRFRKVAKERASIEQTVTALRAYRKLLEDVEGNEAL 69

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L     E      +E +    +++   E  +   +     D  D  +E+ AGAGG E+  
Sbjct: 70  LADKDPELRELAKEELAQLRPQVEPAEEQLKLYLVPKDPNDEKDVIVEIRAGAGGDEAGL 129

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  ++RMY R+AE+R ++ E ++   G   G+K ATL + G   Y  LK E GVHR+ R
Sbjct: 130 FAAEVMRMYVRYAERRGWRVELMDTSGGALGGVKEATLTVSGDAVYSSLKYESGVHRVQR 189

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P   + I+++++ +D  +D +R++G+GGQ VNTTDSAVR+
Sbjct: 190 VPATEAQGRIHTSTVTVAVMP-EAEEIDVQVNPADVEMDVFRSTGSGGQSVNTTDSAVRL 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH PTG+VV+CQQE+SQ KN+  A  MLRAKL+E+E +++    +   + K+++G G   
Sbjct: 249 THKPTGIVVKCQQEKSQLKNRTMAMKMLRAKLFEIEQERQRSARD--ATRKSQVGTGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            +IR+Y   P   + D R N  + +   V+DGD+ D + A 
Sbjct: 307 EKIRTYNF-PQDRLTDHRVNYTRHNLPAVMDGDVQDVIDAC 346


>gi|323343897|ref|ZP_08084124.1| peptide chain release factor RF2 [Prevotella oralis ATCC 33269]
 gi|323095716|gb|EFZ38290.1| peptide chain release factor RF2 [Prevotella oralis ATCC 33269]
          Length = 373

 Score =  229 bits (584), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 128/357 (35%), Positives = 208/357 (58%), Gaps = 12/357 (3%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
            + + L    D D  +        +T+ P  W++   A+  M+  + ++  I   KE++ 
Sbjct: 12  ERADALHRYLDIDRKMVEFEEEQLRTQAPDFWEDPQRAQEQMKLVKGIEKWIKGYKEVRQ 71

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              +  +  +     DD    +E   +  +    +E  + +++L  + D  +  L++++G
Sbjct: 72  YADELQLAFDFY--HDDMVSEEEVDADYAKAIKAIEDLELKNMLRQQEDPMECVLKINSG 129

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PNAYGWLKG 183
           AGGTESQDWA ML+RMY RWAE   +K     + +G+EAGIKS T+ I+G   AYG+LK 
Sbjct: 130 AGGTESQDWAQMLMRMYMRWAEAHGYKVSISNLQEGDEAGIKSVTMEIEGGEYAYGFLKS 189

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SP+++  +R TSF+S++V P+VDDSIE+ +  +    DT+R+ GAGGQ+V
Sbjct: 190 ENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDSIEVFVDPARVSWDTFRSGGAGGQNV 249

Query: 244 NTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           N  +S VR+ ++           ++++  + R Q KN+A+A  +L+++LY+  ++KR E 
Sbjct: 250 NKVESGVRLRYMYQDPDTGEEEEILIENTETRDQPKNRAKAMLLLKSQLYDRAMKKRLEE 309

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E+ K +I WG QIRSYV    + VKD RTN + +    V+DG +DDF+KA L 
Sbjct: 310 QAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKIDDFIKAYLM 365


>gi|315452804|ref|YP_004073074.1| peptide chain release factor 2 [Helicobacter felis ATCC 49179]
 gi|315131856|emb|CBY82484.1| peptide chain release factor 2 [Helicobacter felis ATCC 49179]
          Length = 363

 Score =  229 bits (584), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 160/353 (45%), Positives = 225/353 (63%), Gaps = 3/353 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +   +  +   ++    L+ L  +  DP  WQ+   A    +E+  ++  +S  + 
Sbjct: 12  ELENKCQNVAQIIKPESLQDTLTALEREQSDPLFWQDKERAASKNQEKVKIERLLSAYQN 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            ++ L +   L EL   +D  ++ Q   D    ++  V+  +   +L+   D  DA + +
Sbjct: 72  AKNTLVEARELFELVQNDDPSTLAQLFEDA-PHLQACVQSLEVGVMLANAHDGRDAIVSI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
             G GG ESQDW +ML RMY RWAE++ FK E L+  +GEEAGIK    +I+G N YG++
Sbjct: 131 QPGVGGVESQDWGSMLYRMYLRWAERKGFKVELLDYQEGEEAGIKGVAFIIRGINVYGYM 190

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SP+++N +RHTSF+S+ V P VDD I+I I + D RIDTYRASGAGGQ
Sbjct: 191 KNENGVHRLVRMSPFNANGKRHTSFASVQVSPEVDDDIDIVIEDKDIRIDTYRASGAGGQ 250

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SA+RITH+ TG+VVQCQ +RSQHKNKA A  ML+++LYELEL +++E       
Sbjct: 251 HVNKTESAIRITHLATGIVVQCQNDRSQHKNKAMALKMLKSRLYELELHRQKE--QSSAE 308

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K+EIGWG QIRSYVL PYQ +KD R+ I  ++   +LDGDLD  M+A L  K
Sbjct: 309 EKSEIGWGHQIRSYVLAPYQQIKDARSEIAYSNVEAILDGDLDAMMEAVLVSK 361


>gi|77360001|ref|YP_339576.1| peptide chain release factor 1 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|119361581|sp|Q3IK95|RF1_PSEHT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|76874912|emb|CAI86133.1| Peptide chain release factor 1 (RF-1) [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 361

 Score =  229 bits (584), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 119/346 (34%), Positives = 186/346 (53%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72
            +  V+R   +     DP + ++    + L +E   L+  +      Q    D      +
Sbjct: 9   LEILVERYEEVQALLSDPSVIRDQNRFRALSKEYSDLEEVVKTFLSYQQAQQDVISAEEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L+ +  +      +E  +   +I    +  Q   L     D+N+ YLEV AG GG E+  
Sbjct: 69  LKDSDPDIREMAQEEYKEAKAQILTIEDEIQVLMLPKDPKDNNNVYLEVRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE +K+K + +  ++GE  G K     I G   +G LK E GVHR+ R
Sbjct: 129 FAGDLFRMYSRYAETKKWKVDVVTTNEGEHGGYKEIIANISGEGVFGQLKFESGVHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   V ++  IEI+ +D ++DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRVHTSACTVAVMAEVPEAEAIEINSADLKVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTGVVV+CQ +RSQHKN+A+A ++L A+L + E +KR+  A      +  +G G   
Sbjct: 249 THIPTGVVVECQDQRSQHKNRAKAMSVLAARLQQAEDEKRD--AAEASERRNLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N+     ++V+ GDL   ++  +   +
Sbjct: 307 ERIRTYNY-PQGRITDHRINLTLYRLNEVVAGDLSCIVEPLMQEHQ 351


>gi|303228461|ref|ZP_07315294.1| peptide chain release factor 1 [Veillonella atypica
           ACS-134-V-Col7a]
 gi|303230754|ref|ZP_07317501.1| peptide chain release factor 1 [Veillonella atypica ACS-049-V-Sch6]
 gi|302514514|gb|EFL56509.1| peptide chain release factor 1 [Veillonella atypica ACS-049-V-Sch6]
 gi|302516963|gb|EFL58872.1| peptide chain release factor 1 [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 360

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 112/348 (32%), Positives = 182/348 (52%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 +   L  +  DP +     E + L R+   L   +   +E +  L      +E+
Sbjct: 6   LQVIEDKFMDLEQRISDPEVIARQDEWRKLTRQHAQLSETVEAFREYKKVLAGIDEAMEV 65

Query: 76  ALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             ++      +E +         + +   E  Q   L     D  +  +E+  GAGG E+
Sbjct: 66  IEDKTMDEEFREMAQEELKELKPQKEELEEKLQILLLPKDPNDDKNIIIEIRGGAGGDEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMYT++AE + ++ E ++ ++ E  G K     + G N Y  +K E GVHR+
Sbjct: 126 ALFAGDLFRMYTKYAESQGWRCEIIDANEPELGGFKEVVFSVDGENVYSKMKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS  ++ V P   + ++IEI++ D +IDTYRASGAGGQH+N T+SAV
Sbjct: 186 QRVPATETQGRVHTSTVTVAVLP-EMEDVDIEINDKDLKIDTYRASGAGGQHINKTESAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VV CQ +RSQ +N+ +A  +LRAKL +    ++E  A++    K+++G G 
Sbjct: 245 RITHLPTGIVVACQDQRSQLQNREKAMRVLRAKLQDKA--EQEATASMAADRKSQVGTGD 302

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       +L+GDLD+ ++A  A  +
Sbjct: 303 RSERIRTYNY-PQGRVTDHRINLTLYKLDAILNGDLDEIIQALNAADQ 349


>gi|71892043|ref|YP_277773.1| peptide chain release factor 2 [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|71796149|gb|AAZ40900.1| peptide chain release factor 2 (RF-2) [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 348

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 161/340 (47%), Positives = 223/340 (65%), Gaps = 2/340 (0%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +FD+D  ++    ++ + + P +W+N   AK+L ++   L   I+ + ++   L D   L
Sbjct: 2   IFDYDLKIKHFKIISNELKSPGIWKNPKTAKILRQKSSSLKIFINIVDQLYKNLVDLNDL 61

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           LEL  E D+  + +        ++  +   +   +  G+ D+++ Y+++ +G+GG E+QD
Sbjct: 62  LELTEEYDNILLSEIHD-QSIDLERTLSQLEISRMFIGKYDNSNCYIDIQSGSGGIEAQD 120

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA+MLLRMY RW + + F  + +E   GE  GIKSAT+ + GP AYGWL+ E GVHRLVR
Sbjct: 121 WASMLLRMYLRWIDHKGFMADVIEESTGEVTGIKSATIQVIGPYAYGWLRTESGVHRLVR 180

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
            SP+DS  +RHTSF+S++VYP +DDSI I I   D R D YRASGAGGQHVN T+SAVRI
Sbjct: 181 KSPFDSAKKRHTSFASVFVYPELDDSINIHIRPEDLRCDVYRASGAGGQHVNRTESAVRI 240

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           THIPT +V QCQ +RSQHKNK QA   LRAKLYELELQK+     + ES+K  I WG QI
Sbjct: 241 THIPTNIVTQCQSDRSQHKNKNQAMKQLRAKLYELELQKKNYEKKMRESNKVNITWGNQI 300

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           RSY+L     VKDLRT  EK +   VL+GDLDDF++ ++ 
Sbjct: 301 RSYILD-NSRVKDLRTGFEKRNVKAVLNGDLDDFIRISIK 339


>gi|319900327|ref|YP_004160055.1| bacterial peptide chain release factor 2 (bRF-2) [Bacteroides
           helcogenes P 36-108]
 gi|319415358|gb|ADV42469.1| bacterial peptide chain release factor 2 (bRF-2) [Bacteroides
           helcogenes P 36-108]
          Length = 371

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 132/358 (36%), Positives = 207/358 (57%), Gaps = 11/358 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D +    ++     +T+ P  W++   A+  M++ + L   IS    +
Sbjct: 10  IKERTEALNRYLDIEGKKIQVEEEQLRTQAPGFWEDQKAAEAQMKKVKGLQQWISGYNGV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +     D+    +E  +   +    VE  + +++L  EAD  D  L+++
Sbjct: 70  KTLTDEVQLAFDFYK--DELVSEEEVDEAFAKASAAVEALELKNMLREEADQMDCVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWANML+RMY R+AE   +K     + +G+EAGIK+ T+ I G  AYG+LK
Sbjct: 128 SGAGGTESQDWANMLMRMYLRYAETHGYKAAIANLQEGDEAGIKTCTIEISGDYAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE++I  ++   DT+R+SGAGGQ+
Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVDIKVANISWDTFRSSGAGGQN 247

Query: 243 VNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  +S VR+ +            ++++  + R Q KN+  A   LR+ LY+ ELQ R  
Sbjct: 248 VNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMA 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L 
Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFIKAYLM 364


>gi|269123112|ref|YP_003305689.1| peptide chain release factor 2 [Streptobacillus moniliformis DSM
           12112]
 gi|268314438|gb|ACZ00812.1| bacterial peptide chain release factor 2 (bRF- 2) [Streptobacillus
           moniliformis DSM 12112]
          Length = 362

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 162/321 (50%), Positives = 221/321 (68%), Gaps = 2/321 (0%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
             +++  +++ +++E   L   I  I ++     +  ILLE   +E+    L+E      
Sbjct: 44  GFYKDQNKSQNVLKEISLLKERIKDISKLLTLNENIQILLEFYKQEEI--SLEELETETL 101

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
               E++  + + LL+G+ D N A L ++AGAGGTES DW +ML RMY RWA + KFK E
Sbjct: 102 EFIKELDKFKIKLLLNGKYDKNSAILTINAGAGGTESCDWVSMLYRMYDRWAMQNKFKVE 161

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            L+I  G+EAGIKS TL IKG  AYG+L  E+GVHRLVRISP+DSN+RRHTSF+++ V P
Sbjct: 162 VLDILAGDEAGIKSITLSIKGDYAYGYLDCEKGVHRLVRISPFDSNARRHTSFAAVNVIP 221

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
            ++D +E+ + + D +IDTYRASGAGGQHVNTTDSAVRITHIPTG+VV CQ ERSQ+KN 
Sbjct: 222 EIEDDVEVNLKKEDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGIVVICQNERSQNKNL 281

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
             A  +LRAKL+E+EL+ RE   N  +  +++I WG QIRSYV QPY+MVKD RTN E+ 
Sbjct: 282 NSAMKVLRAKLFEIELKNRENEINDLKGVQSKIEWGSQIRSYVFQPYKMVKDHRTNHEEN 341

Query: 334 SPSDVLDGDLDDFMKATLAIK 354
           +   V+DGD++ F+   L I+
Sbjct: 342 NVDKVMDGDINIFIDEYLKIR 362


>gi|256846801|ref|ZP_05552256.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_36A2]
 gi|256717767|gb|EEU31325.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_36A2]
          Length = 331

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 148/329 (44%), Positives = 217/329 (65%), Gaps = 1/329 (0%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
              T + + W +  ++  +++      N +S  +++   + D  +L++     +     +
Sbjct: 2   EKLTFEENFWSDKRKSSEIIKNMNFEKNIVSRYEKLATEIDDEEVLIDFVESGEASFENE 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
                 + +K ++E  +   LL  E D N+A + +H+GAGGTE+ DWA+ML RMY RW  
Sbjct: 62  -LQTKHKILKSDIEEFEINLLLDREYDMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCN 120

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            + +K   L+  +G+  G+KS T L++G NAYG+LK E+GVHRLVRISP+D+N +RHTSF
Sbjct: 121 LKGYKVSELDFMEGDSVGVKSVTFLVEGINAYGYLKSEKGVHRLVRISPFDANKKRHTSF 180

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S+ V P VD+++E+EI+ +D RIDTYRASGAGGQHVN TDSAVRITH P+G+VV CQ+E
Sbjct: 181 ASVEVVPEVDENVEVEINPTDIRIDTYRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKE 240

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQ  N+  A  ML++KL ELE++K+EE     +  +++IGWG QIRSYV QPY +VKD 
Sbjct: 241 RSQLSNRETAMKMLKSKLLELEIKKKEEEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDH 300

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           RTN E  +   V+DG +DDF+ + L   K
Sbjct: 301 RTNTEIGNVKAVMDGSIDDFINSYLRWIK 329


>gi|294675125|ref|YP_003575741.1| peptide chain release factor 2 [Prevotella ruminicola 23]
 gi|294472270|gb|ADE81659.1| peptide chain release factor 2 [Prevotella ruminicola 23]
          Length = 374

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 128/357 (35%), Positives = 210/357 (58%), Gaps = 12/357 (3%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
            + + L    + D         + +T+ P  W++   A+  M++ + +   +   KE++ 
Sbjct: 12  ERADALHRYLEIDKKKIEYEEEDLRTQAPDFWEDRKRAEEQMKKVKGIKKWLDGYKEVRT 71

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              +  +  +     D+    +E  D   +    +E  + +++L  + D  +A L++++G
Sbjct: 72  LADELQLAFDFFK--DEMVTEEEVEDTYAKAIKAIEDLELKNMLRQKEDPMEAVLKINSG 129

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWLKG 183
           AGGTE+QDWA+ML+RMY RWAE   +K     + DG+EAGIKS T+ ++ G  AYG+LK 
Sbjct: 130 AGGTEAQDWASMLMRMYMRWAEAHGYKVTISNLLDGDEAGIKSVTMQLEGGDYAYGYLKS 189

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SP+++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ+V
Sbjct: 190 ENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDTIEVYVDPAKLSWDTFRSSGAGGQNV 249

Query: 244 NTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           N  +S VR+ +  T         ++++  + R Q KNK +A  +L+++LY+  ++KR E 
Sbjct: 250 NKVESGVRLRYWYTDPDTGEEEEILIENTETRDQPKNKERAMTLLKSQLYDRAMKKRLEA 309

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E+ K +I WG QIRSYV    + VKD RTN + T    V+DG +DDF+KA L 
Sbjct: 310 QAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTTDVDGVMDGKIDDFIKAYLM 365


>gi|261881148|ref|ZP_06007575.1| peptide chain release factor RF2 [Prevotella bergensis DSM 17361]
 gi|270332153|gb|EFA42939.1| peptide chain release factor RF2 [Prevotella bergensis DSM 17361]
          Length = 374

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 132/357 (36%), Positives = 209/357 (58%), Gaps = 12/357 (3%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
            +   L    + D           +T+ P  W +   A+  M++ + L N +    +++ 
Sbjct: 12  ERTTKLHHYLNIDKKQIEFEEEQLRTQAPDFWDDPKRAEAQMKKVKGLQNWLKDYSDVEL 71

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              +    L     +++    +E   +  ++   +E  +F+++L  E DS DA L++++G
Sbjct: 72  LANELE--LAFDYYKEELVTEEEVDADYAKVIKAIEDLEFKNMLRSEEDSMDAVLKINSG 129

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PNAYGWLKG 183
           AGGTESQDWA ML+RMY RW E   +K     + DG+EAGIKS T+ ++G   AYG+LK 
Sbjct: 130 AGGTESQDWAQMLMRMYMRWCESHGYKVTITNLQDGDEAGIKSVTMTVEGGEFAYGYLKS 189

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SPY++  +R TSF+S+++ P+VDD+IE+ +  +    DT+R+SGAGGQ+V
Sbjct: 190 ENGVHRLVRVSPYNAQGKRMTSFASVFISPLVDDTIEVYVDPARLSWDTFRSSGAGGQNV 249

Query: 244 NTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           N  +S VR+ +            ++++  + R Q KNKA+A  +L+++LY+ E++KR E 
Sbjct: 250 NKVESGVRLRYQYEDPDTGEKEEILIENTETRDQPKNKAKAMLLLKSQLYDREMKKRLEA 309

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E+ K +I WG QIRSYV    + VKD RTN + +    V+DGDLD F+KA L 
Sbjct: 310 QAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGDLDGFIKAYLM 365


>gi|294635783|ref|ZP_06714243.1| peptide chain release factor 1 [Edwardsiella tarda ATCC 23685]
 gi|291090883|gb|EFE23444.1| peptide chain release factor 1 [Edwardsiella tarda ATCC 23685]
          Length = 360

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 116/337 (34%), Positives = 177/337 (52%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +      + +    D      +
Sbjct: 9   LEALQERHEEVQALLGDAGVIADQDRFRALSREYVQLTDVSRCFLDWRQAQDDLETAEMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE     +    E+E +    L      D  + +LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQEEIKETRERLNELEQQLQILLLPKDPDDERNCFLEVRAGTGGDEAGLFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +GE  G K     + G  AYG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRIEVMSASEGEHGGYKEVIAKVSGEGAYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P V ++   +I+ +D RIDTYR+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEVPEAELPQINPADLRIDTYRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR+       + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEIAKRQ--REEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           IR+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDSLIE 342


>gi|198274326|ref|ZP_03206858.1| hypothetical protein BACPLE_00470 [Bacteroides plebeius DSM 17135]
 gi|198272816|gb|EDY97085.1| hypothetical protein BACPLE_00470 [Bacteroides plebeius DSM 17135]
          Length = 371

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 134/358 (37%), Positives = 207/358 (57%), Gaps = 11/358 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D +    ++     +T+ P  W +   A+  M++ + L   I+  +E+
Sbjct: 10  VKERTEALYRYLDIEGKKIQVEEEQLRTQAPGFWDDQKAAEAQMKKVKALQQWITGYQEV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +    L     +D+    +E  +   +    VE  + +++L  EAD  D  L+++
Sbjct: 70  KTLADELQ--LSFDFYKDELVTEEEVDEAYSKAISAVEELELKNMLRSEADQMDCVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA+ML+RMY RWAE   +K     + +G+EAGIK+ T+ I+G  AYG+LK
Sbjct: 128 SGAGGTESQDWASMLMRMYMRWAESNGYKLSVANLQEGDEAGIKTVTMNIEGSYAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+ +  +    DT+R+ GAGGQ+
Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVTVEPARLSWDTFRSGGAGGQN 247

Query: 243 VNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  +S VR+ +            ++++  + R Q KNK  A   LR+ LY+ ELQ R E
Sbjct: 248 VNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNKENAMRQLRSILYDKELQHRME 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L 
Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNGVMDGKIDGFIKAYLM 364


>gi|308186585|ref|YP_003930716.1| Peptide chain release factor 1 (RF-1) [Pantoea vagans C9-1]
 gi|308057095|gb|ADO09267.1| Peptide chain release factor 1 (RF-1) [Pantoea vagans C9-1]
          Length = 360

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 110/337 (32%), Positives = 176/337 (52%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     ++ Q    D     ++
Sbjct: 9   LEALQERHEEVEAMLGDAGVIADQERFRALSREYAQLTDVTRCFRDWQQVQEDIETAQQM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE     +     +E +    L      D    ++EV AG GG E+  +A
Sbjct: 69  LDDPEMRDMAQEELQEAREKSDVLEQQLQVLLLPKDPDDERACFIEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +  ++GE  G K     + G  AYG +K E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRVEIVSANEGEHGGYKEVIARVTGDGAYGRMKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   EI+  D +IDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVMPEIPEAELPEINAGDLKIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A  +L ++++  E+ +R   A    + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALAVLGSRIHAAEMARR--HAAEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTIYRLDEVMEGKLDSLIE 342


>gi|149377994|ref|ZP_01895719.1| peptide chain release factor 1 [Marinobacter algicola DG893]
 gi|149357703|gb|EDM46200.1| peptide chain release factor 1 [Marinobacter algicola DG893]
          Length = 361

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 118/338 (34%), Positives = 181/338 (53%), Gaps = 9/338 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   ++    D     N  + + L RE   ++  +   +  Q    D     EL
Sbjct: 9   LEQLVDRFEEVSALLSDQGTIANQDKFRDLSREFAEIEPIVHCFQAWQKSRDDVKEATEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN---DAYLEVHAGAGGTESQD 132
           A + D         +     +   E  +    L    D N   + +LEV AG GG E+  
Sbjct: 69  ARDGDADMRAMAEEELGLAEQKGEELDEELQRLMLPKDPNDGKNVFLEVRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L +MY R+AE+++++ E +   +GE  G K     I G   YG LK E G HR+ R
Sbjct: 129 FAGDLFKMYMRYAERQRWQVEVISASEGEHGGYKEVIARIAGSAVYGALKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D++  +EI++SD R+DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVAVMPEADETEAVEINKSDLRVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV+CQ+ERSQHKN+A+A + L ++L   E++++++   +  + K+ +G G   
Sbjct: 249 THIPTGIVVECQEERSQHKNRAKAMSFLASRLQNEEIERQQKT--MAATRKSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            +IR+Y   P   V D R N+      +V+ GDLD  +
Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYKLDEVISGDLDAVI 343


>gi|260495130|ref|ZP_05815258.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_33]
 gi|260197187|gb|EEW94706.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_33]
          Length = 331

 Score =  229 bits (583), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 151/329 (45%), Positives = 218/329 (66%), Gaps = 1/329 (0%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
              T + + W +  ++  +++      N +S  +++   + D  +L++     +     +
Sbjct: 2   EKLTFEENFWSDKRKSSEIIKNMNFEKNIVSRYEKLATEIEDEEVLIDFVESGETSFESE 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
            +    + +K +VE  +   LL GE D N+A + +H+GAGGTE+ DWA+ML RMY RW  
Sbjct: 62  LSE-KHKILKNDVEEFEINLLLDGEYDMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCN 120

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            R +K   L+  +G+  G+KS T L++G NAYG+LK E+GVHRLVRISP+D+N +RHTSF
Sbjct: 121 LRNYKVTELDFMEGDSVGVKSVTFLVEGINAYGYLKSEKGVHRLVRISPFDANKKRHTSF 180

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S+ V P VD+++E+EI  +D RIDTYRASGAGGQHVN TDSAVRITH P+G+VV CQ+E
Sbjct: 181 ASVEVVPEVDENVEVEIDPADIRIDTYRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKE 240

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQ  N+  A  ML++KL ELE++K+EE     +  +++IGWG QIRSYV QPY +VKD 
Sbjct: 241 RSQLSNRETAMKMLKSKLLELEIKKKEEEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDH 300

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           RTN E  +   V+DG +DDF+ + L   K
Sbjct: 301 RTNTEIGNVKAVMDGSIDDFINSYLRWIK 329


>gi|329956010|ref|ZP_08296781.1| putative peptide chain release factor 2 [Bacteroides clarus YIT
           12056]
 gi|328524769|gb|EGF51823.1| putative peptide chain release factor 2 [Bacteroides clarus YIT
           12056]
          Length = 372

 Score =  229 bits (583), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 132/358 (36%), Positives = 206/358 (57%), Gaps = 11/358 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D +    ++     +T+ P  W +   A+  M++ + L   IS   E+
Sbjct: 10  IKERTEALNRYLDIEGKKIQVEEEQLRTQAPGFWDDQKAAEAQMKKVKGLQQWISGYNEV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +     D+    +E  +   +    VE  + +++L  EAD  D  L+++
Sbjct: 70  KVMADELQLAFDFYK--DELVTEEEVDEAYAKASAAVEALELKNMLREEADQMDCVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTESQDWA+ML+RMY R+AE   +K     + +G+EAGIK+ T+ I G  AYG+LK
Sbjct: 128 SGAGGTESQDWASMLMRMYLRYAETHGYKATIANLQEGDEAGIKACTIEIAGDYAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+ I ++    DT+R+SGAGGQ+
Sbjct: 188 GENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVNIEQARISWDTFRSSGAGGQN 247

Query: 243 VNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  +S VR+ +            ++++  + R Q KN+  A   LR+ LY+ ELQ R  
Sbjct: 248 VNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAMRQLRSILYDKELQHRMA 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E+ K +I WG QIRSYV    + VKD RTN + +  + V+DG +D F+KA L 
Sbjct: 308 EQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNGVMDGKIDGFVKAYLM 364


>gi|317063162|ref|ZP_07927647.1| peptide chain release factor 2 [Fusobacterium ulcerans ATCC 49185]
 gi|313688838|gb|EFS25673.1| peptide chain release factor 2 [Fusobacterium ulcerans ATCC 49185]
          Length = 328

 Score =  229 bits (583), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 149/327 (45%), Positives = 214/327 (65%), Gaps = 1/327 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
            T + + W +   +  +++E       ++  K+++  + +  +L++     +     +  
Sbjct: 1   MTMEENFWNDKRSSSAIIKEMNDEKEIVAEFKKLESEMGEEEVLIDFVEMGEADFQTELE 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
             ++   K          LL GE DSN+A + +H+GAGGTE+ DWA+ML RMY+RW  ++
Sbjct: 61  EKHMILGKDIDH-FDTRLLLDGEFDSNNAIVTIHSGAGGTEACDWADMLYRMYSRWCNEK 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
           K+K   ++   G+  GIKS T L++G NAYG++K E+G+HRLVRISP+D+N +RHTSF+S
Sbjct: 120 KYKISEMDFMPGDSVGIKSITFLVEGRNAYGYMKSEKGIHRLVRISPFDANKKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P VD+S+E+ I   D RIDTYRASGAGGQHVN TDSAVRITHIPTG+VV CQ+ERS
Sbjct: 180 VEVMPEVDESVEVNIDAGDLRIDTYRASGAGGQHVNMTDSAVRITHIPTGIVVTCQRERS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q  N+  A  ML++KL ELE++K+EE     +  ++EIGWG QIRSYV QPY +VKD RT
Sbjct: 240 QLNNRETAMKMLKSKLIELEMKKKEEEMKRIQGEQSEIGWGNQIRSYVFQPYTLVKDHRT 299

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIKK 355
           + E  +   V+DGD+D F+   L   K
Sbjct: 300 SAESGNIKAVMDGDIDIFINTYLRWNK 326


>gi|13959455|sp|P57511|RF2_BUCAI RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 365

 Score =  229 bits (583), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 161/351 (45%), Positives = 240/351 (68%), Gaps = 1/351 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+R++  L    D++    R+  ++ +   P  W   I  K L +E+  L++ I  I EI
Sbjct: 14  LNRRVQDLKRYLDYNKKKSRVLEIDLELSSPKTWTEQISIKKLNKEKYLLNSIIQNINEI 73

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ + + +I LELA+E  D  + +E+   +Q+I+ E++  +F  + S + D  D Y+++ 
Sbjct: 74  EENIKEVVIFLELAIETQDNLVFKESLLEIQKIEQEIKKLEFYRMFSKKNDHYDCYIDIQ 133

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +G+GGT++QDW+ MLLRMY RWA+K+ F TE ++   GE  GIKS+T+ + G  A+GW +
Sbjct: 134 SGSGGTDAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIKSSTIKVSGEYAFGWFR 193

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRL+R SP+DS  RRHTSFSSI++YP +++ I+I I+ SD RID YRASGAGGQH
Sbjct: 194 TETGIHRLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYSDLRIDVYRASGAGGQH 253

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SAVRITH+PT +V QCQ  RSQHKNK QA   +++KLYE++++K++E     E +
Sbjct: 254 VNRTESAVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYEIQMRKKQEEKQKIEQN 313

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           K++I WG QIRSY+L     +KDLRT +EK     VLDGDLDDF++ +L +
Sbjct: 314 KSDITWGNQIRSYILD-NSKIKDLRTGVEKNHVQSVLDGDLDDFIEQSLIM 363


>gi|157273346|gb|ABV27245.1| peptide chain release factor 1 [Candidatus Chloracidobacterium
           thermophilum]
          Length = 357

 Score =  229 bits (583), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 114/347 (32%), Positives = 178/347 (51%), Gaps = 12/347 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD      ++   L  +  DP +  +      L ++   L   +   +E Q    +   
Sbjct: 1   MFDKLKALEEKYEALTAQLSDPEVVADAARYAKLAKQHSELTEVVEKFREYQTIEANLAS 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
             EL  E +D  ++    + +  ++ +    Q E           D  +  LE+ AG GG
Sbjct: 61  ARELLNEAEDAEMVALAREEIALLEKQRAQCQLELEQLLTPKDPNDRKNVLLEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  LLRMY R+AE+R ++ + L+    E  G+K   +LI+G   Y  LK E GV
Sbjct: 121 NEASLFAGELLRMYLRYAERRGWRVQILDESLSEVGGLKEGIVLIEGTGVYSRLKHESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + ++IEI   D RIDT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPVTESAGRIHTSTVTVAVLP-EAEEVDIEIDPKDVRIDTFCSSGPGGQSVNTTY 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+VV  Q E+SQ KN+ +A+ +LRA+L ELE QK+ E   I    + ++G
Sbjct: 240 SAVRLTHLPTGLVVSIQDEKSQIKNREKAFRILRARLLELERQKQHE--AIAGERRAQVG 297

Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            G +   IR+Y  +    V D R  +       ++DG+LD  +   +
Sbjct: 298 TGERSEKIRTYNFK-ENRVTDHRIGLTLHQLDTIMDGELDGLIDPLI 343


>gi|296101959|ref|YP_003612105.1| peptide chain release factor 1 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295056418|gb|ADF61156.1| peptide chain release factor 1 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 360

 Score =  229 bits (583), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 114/337 (33%), Positives = 178/337 (52%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSKCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   +  +E  D   R +   +  Q   L     D  +A++EV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQEELQDAKARSEEMEQQLQVLLLPKDPDDERNAFVEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +  ++GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESRRWRVEIMSANEGEHGGFKEVIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIE 342


>gi|323704815|ref|ZP_08116392.1| peptide chain release factor 1 [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323535741|gb|EGB25515.1| peptide chain release factor 1 [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 353

 Score =  229 bits (583), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 122/345 (35%), Positives = 185/345 (53%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L+ K  DP   +++ E K + +E+  L+  +   +E +    D     EL
Sbjct: 5   LKAIEDRYVELSQKLSDPESMKDMDEWKKMAKEQAGLEEIVQKYREYKKVKDDIESTKEL 64

Query: 76  ALEEDDCSIL--QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
              +D+   +   E     ++ +  +   +   L     D  D  +E+ AGAGG E+  +
Sbjct: 65  IEMDDELKDMAEDELKSLEEKEESLLNEIKLLLLPKDPNDEKDVIMEIRAGAGGEEAALF 124

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMYT +AEK+++K E +  +  E  G K     I G  AY  LK E GVHR+ RI
Sbjct: 125 AYDLFRMYTMYAEKKRWKYEIMSSNATELGGFKEVIFSIAGKGAYSRLKFESGVHRVQRI 184

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ V P   + ++IEI+ +D +ID +R+ G GGQ VNTTDSAVR+T
Sbjct: 185 PTTEAGGRIHTSTATVAVLP-EVEDVDIEINPNDIKIDVFRSGGHGGQSVNTTDSAVRLT 243

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           HIPTG+V+ CQ ERSQ +N+ +A  +LRAKLYE+  +++E    I  + K ++G G    
Sbjct: 244 HIPTGIVISCQDERSQLQNRERAMKILRAKLYEMAREEKE--REISMTRKLQVGTGDRSE 301

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       VLDGDLD+ + A LA  +
Sbjct: 302 RIRTYNF-PQGRVTDHRIGLTLYKLQMVLDGDLDEIIDALLAEDQ 345


>gi|220915515|ref|YP_002490819.1| peptide chain release factor 1 [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|254790857|sp|B8JAU2|RF1_ANAD2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219953369|gb|ACL63753.1| peptide chain release factor 1 [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 370

 Score =  229 bits (583), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 110/341 (32%), Positives = 183/341 (53%), Gaps = 10/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QR   L     DP +  N    + + +ER  ++  ++ ++  +  L D      L
Sbjct: 10  LEAIEQRFEELTQLLSDPAVAGNGDRFRKVAKERASIEQTVTALRAYRKLLEDVEGNEAL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYLEVHAGAGGTESQD 132
             ++D         +  Q        ++      +     D  D  +E+ AGAGG E+  
Sbjct: 70  LADKDPELRELAKEELAQLRPQVDPAEEQLKLYLVPKDPNDEKDVIVEIRAGAGGDEAGL 129

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  ++RMY R+AE+R ++ E ++   G   G+K ATL + G   Y  LK E GVHR+ R
Sbjct: 130 FAAEVMRMYVRYAERRGWRVELMDTSGGALGGVKEATLTVSGDAVYSSLKYESGVHRVQR 189

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P   + I+++++ +D  +D +R++G+GGQ VNTTDSAVR+
Sbjct: 190 VPATEAQGRIHTSTVTVAVMP-EAEEIDVQVNPADVEMDVFRSTGSGGQSVNTTDSAVRL 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH PTG+VV+CQQE+SQ KN+  A  MLRAKL+E+E +++    +   + K+++G G   
Sbjct: 249 THKPTGIVVKCQQEKSQLKNRTMAMKMLRAKLFEIEQERQRSARD--ATRKSQVGTGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            +IR+Y   P   + D R N  + +   V+DGD+ D + A 
Sbjct: 307 EKIRTYNF-PQDRLTDHRVNYTRHNLPAVMDGDVQDVIDAC 346


>gi|170728014|ref|YP_001762040.1| peptide chain release factor 1 [Shewanella woodyi ATCC 51908]
 gi|238688639|sp|B1KDU3|RF1_SHEWM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169813361|gb|ACA87945.1| peptide chain release factor 1 [Shewanella woodyi ATCC 51908]
          Length = 361

 Score =  229 bits (583), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 111/342 (32%), Positives = 183/342 (53%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     DP +  +    + L +E   L++ +      Q    D     E+
Sbjct: 9   LEGLLERNEEVLALLSDPSVIADQERFRALSKEYSQLEDVVKSFTAFQQATEDLEAAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRI---KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D         +  +     +   +  Q   L     D N+A++E+ AGAGG E+  
Sbjct: 69  LNEDDPELKEMAQEEMKEAKSVLETLEDELQILLLPKDPNDDNNAFIEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY++++E  +++ E +  ++GE  G K     I G   YG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSKYSESNRWQIEVMNTNEGEHGGFKEVIAKISGEGVYGKLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P + ++  IEI+++D ++DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRVHTSACTVIVLPEIPEAEAIEINKADLKVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV+CQ +RSQHKN+AQA ++L A++  +E +KR        + +  +  G   
Sbjct: 249 THIPTGIVVECQDQRSQHKNRAQAMSVLSARIQAVEDEKRRSEEE--STRRNLVSSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +IR+Y   P   + D R N+     ++V++G LD  ++  +
Sbjct: 307 ERIRTYNF-PQGRMSDHRINLTLYRLNEVMEGVLDVIIEPLI 347


>gi|28493165|ref|NP_787326.1| peptide chain release factor 2 [Tropheryma whipplei str. Twist]
 gi|28572722|ref|NP_789502.1| peptide chain release factor 2 [Tropheryma whipplei TW08/27]
 gi|28410855|emb|CAD67240.1| peptide chain release factor 2 [Tropheryma whipplei TW08/27]
 gi|28476205|gb|AAO44295.1| peptide chain release factor RF-2 [Tropheryma whipplei str. Twist]
          Length = 376

 Score =  229 bits (583), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 138/352 (39%), Positives = 209/352 (59%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ +  + +  +       +R++ L  +  DP LW     A+ + RE       +  +  
Sbjct: 12  EIEKTFSEITSVVSPVLLSKRIAELTARVSDPDLWTTPDRAQQIARELSITKAQLDRLTN 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ +L +  +L+ L   E D  +L E S   + +  E  +   +++L+ E D   A L +
Sbjct: 72  LEAQLDEMRVLVTLLENEHDAGLLDEGSRKAKLLLEEANHLLIQNMLNNEYDCYPAVLTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG ++ D+A MLLRMY RWA+K   +   ++I   EEAGI+SATL I  P A+G L
Sbjct: 132 RAGAGGIDAADFAQMLLRMYIRWAQKHSSEAIVMDISYAEEAGIRSATLRIDLPFAFGKL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E G HRLVRISP+++  +RHTSF+++ V P++++   IEI+  + RID +R+SG GGQ
Sbjct: 192 HQESGTHRLVRISPFNAAGKRHTSFAAVEVIPLLEEVSSIEITNDEIRIDVFRSSGPGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTG+VV CQ E+SQ +N+  A  +LRA+L   + Q+   I      
Sbjct: 252 SVNTTDSAVRITHLPTGIVVSCQNEKSQIQNRESAMRILRARLLLNKRQEEAAIRKELAG 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +     WG Q+R+YVL PYQ+VKDLR+  E + P  V DGD+D F+ A +  
Sbjct: 312 NIV-ASWGEQVRNYVLAPYQLVKDLRSLHESSMPDKVFDGDIDGFIDAGIKW 362


>gi|304397559|ref|ZP_07379436.1| peptide chain release factor 1 [Pantoea sp. aB]
 gi|304354731|gb|EFM19101.1| peptide chain release factor 1 [Pantoea sp. aB]
          Length = 360

 Score =  229 bits (583), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 111/337 (32%), Positives = 177/337 (52%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     ++ Q    D     ++
Sbjct: 9   LEALQERHEEVEAMLGDAGVIADQERFRALSREYAQLTDVTRCFRDWQQVQEDIETAQQM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE      ++  +  +  Q   L     D    ++EV AG GG E+  +A
Sbjct: 69  LDDPEMRDMAQEELQEAREKNDVLEQQLQVLLLPKDPDDERACFIEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +  ++GE  G K     + G  AYG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRVEIISANEGEHGGYKEVIARVTGDGAYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   EI+  D +IDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVMPEIPEAELPEINAGDLKIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A  +L ++++  E+ +R   A    + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALAVLGSRIHAAEMARR--HAAEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTIYRLDEVMEGKLDSLIE 342


>gi|302384870|ref|YP_003820692.1| peptide chain release factor 1 [Clostridium saccharolyticum WM1]
 gi|302195498|gb|ADL03069.1| peptide chain release factor 1 [Clostridium saccharolyticum WM1]
          Length = 358

 Score =  229 bits (583), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 113/351 (32%), Positives = 187/351 (53%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D+ +     L  +  +P + ++    + LM+E+  L + +    + +        
Sbjct: 1   MFDKLDDILIHYEELMQELNNPSVTEDQNRFRKLMKEQADLADLVETYTQYKKAKQTVED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            L L  EE D  + +   + L   K ++E  +       L     D  +  LE+ AGAGG
Sbjct: 61  SLALLEEESDEEMREMAKEELSEAKKQIEALEQELKILLLPKDPNDDKNIILEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A+ L RMY  +AE   +K E + +++    G K    +I G  AY  +K E GV
Sbjct: 121 DEAALFASELYRMYVNYAEGHHWKVELISVNENGIGGFKEVVAMITGKGAYSKMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P  ++   + I + D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVMPEAEEFDVV-IEDKDVRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+V+  Q E+SQ +NK +A+ +LR+KLY++EL+KR+   +  E  +++IG
Sbjct: 240 SAVRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDIELEKRQ--NSEAEERRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++GD+ + + + +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLYKIDSIMNGDIQELLDSLIAADQ 347


>gi|319650894|ref|ZP_08005031.1| peptide chain release factor 1 [Bacillus sp. 2_A_57_CT2]
 gi|317397492|gb|EFV78193.1| peptide chain release factor 1 [Bacillus sp. 2_A_57_CT2]
          Length = 357

 Score =  229 bits (583), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 107/351 (30%), Positives = 175/351 (49%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   +   R   LN    DP +  +  + +   +E+  +   +   +E ++       
Sbjct: 1   MFDRLQSVEDRYERLNELLSDPEIVNDPKKLREYSKEQSGIQETVDTYREYKEVKEQYQD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
              +  E+ D  + +   + L  ++   E  +       +     D  +  +E+   AGG
Sbjct: 61  ARAMLEEKLDAEMREMVKEELAELEERKEDLEARLKILLIPKDPNDDKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +K + +E       G K    +I G  AY  LK E G 
Sbjct: 121 DEAALFAGDLYRMYSRYAETQGWKIDVIEASSTGVGGYKEIIFMINGNGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EAEEVEIDIHEKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG VV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   +  K+ +G
Sbjct: 240 SAVRLTHLPTGTVVSCQDEKSQIKNKEKAMKVLRARVYDKF--QQEAQAEYDQQRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L G LD+ + A +  ++
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDEVIDALIVEEQ 347


>gi|292493886|ref|YP_003529325.1| peptide chain release factor 1 [Nitrosococcus halophilus Nc4]
 gi|291582481|gb|ADE16938.1| peptide chain release factor 1 [Nitrosococcus halophilus Nc4]
          Length = 363

 Score =  229 bits (583), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 118/346 (34%), Positives = 187/346 (54%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72
            +N  +R   L     +P +  +  + +   +E   L+  I   ++ +   + L +   L
Sbjct: 9   LENLAERQQELAALLAEPEIANDQKQFREFSQEYAQLEPVIGCFRDFEETQNALNEAKAL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L+    E      +E ++  ++++   +  Q   L S   D  + +LE+ AG GG E+  
Sbjct: 69  LKDQDPELRTLAQEEVAEAERKLEQLDQELQTLLLPSDPNDKRNIFLEIRAGIGGDEAAL 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A+ LLRMY R+AE+R ++ E +    GE  G K   + I G  AY  LK E G HR+ R
Sbjct: 129 FASDLLRMYLRYAEQRGWRKEIISDSPGEYGGHKEVIIRIVGEGAYSRLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ + P  ++  +I+I+ SD RIDT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPQTESQGRIHTSACTVAIMPEAEEIDDIDINLSDLRIDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ ERSQHKN+ +A ++LRAKL   E  K         + ++ +G G   
Sbjct: 249 THLPTGIVVECQDERSQHKNRVRAMSLLRAKLKSKEETKLAAE--EAATRRSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+      ++L+G L+  +   +A  +
Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYKLDEILEGHLNAVIDPLIAEYQ 351


>gi|258616656|ref|ZP_05714426.1| peptide chain release factor 2 in translation [Enterococcus faecium
           DO]
          Length = 246

 Score =  229 bits (583), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 149/243 (61%), Positives = 186/243 (76%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
             D N+A +E+H GAGGTESQDW +MLLRMYTRWAE+  ++ E L+   G+EAGIKS TL
Sbjct: 1   PYDRNNAIVELHPGAGGTESQDWGSMLLRMYTRWAEQHGYQVETLDYQAGDEAGIKSVTL 60

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
           LIKG NA+G+LK E+GVHRLVRISP+DS  RRHTSF S+ V P +D++I+IEI+  D +I
Sbjct: 61  LIKGHNAFGYLKSEKGVHRLVRISPFDSAKRRHTSFCSVDVMPELDETIDIEINPDDLKI 120

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DTYRASGAGGQH+N T+SAVRITH+PTG VV  Q +RSQ KN+ QA  ML+AKLY+LE++
Sbjct: 121 DTYRASGAGGQHINKTESAVRITHLPTGTVVASQAQRSQLKNREQAMGMLKAKLYQLEVE 180

Query: 291 KREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           K+E+ A      + EIGWG QIRSYV  PY MVKD RTN+E  +   V+DGDLD F+   
Sbjct: 181 KKEQEAAALRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNVETGNVQAVMDGDLDLFIDGY 240

Query: 351 LAI 353
           L +
Sbjct: 241 LKM 243


>gi|33860740|ref|NP_892301.1| peptide chain release factor 2 [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
 gi|33633682|emb|CAE18639.1| peptide chain release factor RF-2 [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
          Length = 373

 Score =  229 bits (583), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 138/352 (39%), Positives = 206/352 (58%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L+++L       D  N V +   L      P  W N  +AK  M     + + +  + +
Sbjct: 13  ELTKRLGNAQDCLDVPNLVAKKKELEQIAAQPEFWGNQADAKKHMLNLDDVRDQLQLLDK 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            +  + D    LEL   E +  ++ E+   L  ++  ++  +F+ LL GE D   A + +
Sbjct: 73  WKMFISDAEASLELYSLEPEEEMIVESHQGLVTLRENLDKWEFQRLLCGEYDKEAAIVSI 132

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           +AGAGGT++QDW  +LLRMY+RW +      E  ++ DGEEAGIKS T  + G  AYG+L
Sbjct: 133 NAGAGGTDAQDWVEILLRMYSRWVDNNGMSLEITDLSDGEEAGIKSVTFEVNGKYAYGYL 192

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E+G HRLVRISP+++N +R TSF+ + V P +D SI ++I + D  I T R+ GAGGQ
Sbjct: 193 QNEKGTHRLVRISPFNANGKRQTSFAGVEVMPKLDQSISLDIPDKDLEITTSRSGGAGGQ 252

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++AVRI H+P+G+ V+C QERSQ +NK +A  +L+AKL  +  ++R    +  + 
Sbjct: 253 NVNKVETAVRIVHLPSGIAVRCTQERSQLQNKEKAMLLLKAKLLVIAKEQRASEISDIKG 312

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
              E  WG QIR+YV  PYQMVKDLRT  E      VL+G LD F+   L +
Sbjct: 313 DIVEAAWGNQIRNYVFHPYQMVKDLRTMKETNDLDAVLNGGLDQFIHELLRM 364


>gi|281421022|ref|ZP_06252021.1| peptide chain release factor 2 [Prevotella copri DSM 18205]
 gi|281404940|gb|EFB35620.1| peptide chain release factor 2 [Prevotella copri DSM 18205]
          Length = 375

 Score =  228 bits (582), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 125/356 (35%), Positives = 208/356 (58%), Gaps = 12/356 (3%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           + + L    + D           +T+ P  W++   A+  M++ + +   +   K ++  
Sbjct: 13  RADALHHYLNIDQKKVEFEEEQLRTQAPDFWEDPKYAQEQMKKVKGIQKWLDGYKTVRLY 72

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
             +  +  +     D+    +E   +  +    +E  + +++L  + D  D  L++++GA
Sbjct: 73  ADELQLAFDFYK--DEMVTEEEVDADYAKAIKAIEDLELKNMLRQKEDPMDCVLKINSGA 130

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PNAYGWLKGE 184
           GGTESQDWA ML+RMY RW+E   +K    ++ +G+EAGIKS T+ I+G   AYG+LK E
Sbjct: 131 GGTESQDWAQMLMRMYMRWSEAHGYKVTITDMQEGDEAGIKSVTMTIEGGEYAYGYLKSE 190

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHRLVR+SP+++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ+VN
Sbjct: 191 NGVHRLVRVSPFNAQGKRMTSFASVFVTPLVDDTIEVYVDPAKLSWDTFRSSGAGGQNVN 250

Query: 245 TTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
             +S VR+ +  T         ++++  + R Q KN+A+A  +L+++LY+  ++KR E  
Sbjct: 251 KVESGVRLRYWYTDPDTGEEEEILIENTETRDQPKNRAKALLLLKSQLYDRAMKKRLEAK 310

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              E+ K +I WG QIRSYV    + VKD RTN + +    V+DG +DDF+KA L 
Sbjct: 311 AKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKIDDFIKAYLM 365


>gi|134294603|ref|YP_001118338.1| peptide chain release factor 1 [Burkholderia vietnamiensis G4]
 gi|166223537|sp|A4JB50|RF1_BURVG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|134137760|gb|ABO53503.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia
           vietnamiensis G4]
          Length = 360

 Score =  228 bits (582), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 118/346 (34%), Positives = 177/346 (51%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72
            D    RL+ LN      ++  ++ + + L RE   L   +      +    D      L
Sbjct: 9   LDQLSVRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRNDEAAAQEL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L  A   D       ++            K          D  + +LE+ AG GG ES  
Sbjct: 69  LADASMRDFAEEAIRSARERMTRLEGELQKMLL--PKDPNDDRNIFLEIRAGTGGDESAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R
Sbjct: 127 FAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV+CQ +RSQHKNK +A  +L A++ +   Q  E+ A    + K+ IG G   
Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N+       ++DGDLD+ + A ++  +
Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYRLEALMDGDLDELIGALVSEHQ 349


>gi|257468914|ref|ZP_05633008.1| peptide chain release factor 2 [Fusobacterium ulcerans ATCC 49185]
          Length = 326

 Score =  228 bits (582), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 148/324 (45%), Positives = 213/324 (65%), Gaps = 1/324 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           + + W +   +  +++E       ++  K+++  + +  +L++     +     +    +
Sbjct: 2   EENFWNDKRSSSAIIKEMNDEKEIVAEFKKLESEMGEEEVLIDFVEMGEADFQTELEEKH 61

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +   K          LL GE DSN+A + +H+GAGGTE+ DWA+ML RMY+RW  ++K+K
Sbjct: 62  MILGKDIDH-FDTRLLLDGEFDSNNAIVTIHSGAGGTEACDWADMLYRMYSRWCNEKKYK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
              ++   G+  GIKS T L++G NAYG++K E+G+HRLVRISP+D+N +RHTSF+S+ V
Sbjct: 121 ISEMDFMPGDSVGIKSITFLVEGRNAYGYMKSEKGIHRLVRISPFDANKKRHTSFASVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P VD+S+E+ I   D RIDTYRASGAGGQHVN TDSAVRITHIPTG+VV CQ+ERSQ  
Sbjct: 181 MPEVDESVEVNIDAGDLRIDTYRASGAGGQHVNMTDSAVRITHIPTGIVVTCQRERSQLN 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A  ML++KL ELE++K+EE     +  ++EIGWG QIRSYV QPY +VKD RT+ E
Sbjct: 241 NRETAMKMLKSKLIELEMKKKEEEMKRIQGEQSEIGWGNQIRSYVFQPYTLVKDHRTSAE 300

Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355
             +   V+DGD+D F+   L   K
Sbjct: 301 SGNIKAVMDGDIDIFINTYLRWNK 324


>gi|317491752|ref|ZP_07950187.1| peptide chain release 1 [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920186|gb|EFV41510.1| peptide chain release 1 [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 360

 Score =  228 bits (582), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 113/337 (33%), Positives = 174/337 (51%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     +  Q    D      +
Sbjct: 9   LEALQERHEEVQAHLGDAGVIADQDRFRALSREYAQLTDVTRCFQTWQQVQEDLSTAEMM 68

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE     +       +  Q   L     D    YLE+ AG GG E+  +A
Sbjct: 69  LDDPEMREMAQEEIAEAKNQIADLEQQLQILLLPKDPDDERSCYLEIRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             + RMY+R+AE R++K E +  ++GE  G K     + G  AYG LK E G HR+ R+ 
Sbjct: 129 GDMFRMYSRYAESRRWKIEVMSANEGEHGGYKEIIAKVIGDGAYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +I+  D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEIPEAELPDINPGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIRAAEMAKRQQE--EASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTIYRLDEVMEGKLDSLIE 342


>gi|118581059|ref|YP_902309.1| peptide chain release factor 1 [Pelobacter propionicus DSM 2379]
 gi|166223584|sp|A1ASD1|RF1_PELPD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118503769|gb|ABL00252.1| bacterial peptide chain release factor 1 (bRF-1) [Pelobacter
           propionicus DSM 2379]
          Length = 354

 Score =  228 bits (582), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 109/348 (31%), Positives = 175/348 (50%), Gaps = 9/348 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +   +R   L     DP +  N  E + L RE   L   ++  +  +  L +   
Sbjct: 1   MFDKIEELERRYQELEALLSDPAVISNQPEFRKLSREHADLTGLVAAYRRYRRVLEEMEG 60

Query: 72  LLELALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             EL  + D   +  +E     +  +      Q   L     D     LE+ AG GG ES
Sbjct: 61  NRELLADVDMKEMAEEELKVLEEEKERLEGEIQMLLLPRDPNDDKSVILEIRAGTGGDES 120

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY+R+A+  ++K E +   + E  G K     ++G   +  LK E G HR+
Sbjct: 121 ALFAGDLFRMYSRFADVNRWKVETISASESERGGFKEIIASVEGEGVFAKLKYESGTHRV 180

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS  ++ +     + ++I+I+ +D +ID YR+SGAGGQHVNTTDSAV
Sbjct: 181 QRVPETEAQGRIHTSACTVAIMA-EAEDVDIDINPTDLKIDVYRSSGAGGQHVNTTDSAV 239

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG VV CQ+ERSQ KN+A+A  +L+ ++ +   Q++   A +    K ++G G 
Sbjct: 240 RITHLPTGTVVACQEERSQIKNRAKAMKVLKTRIMDSIQQEQN--ARMAADRKQQVGSGD 297

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   + D R  +       ++ GD+ + + A  A  +
Sbjct: 298 RSERIRTYNF-PQGRMTDHRIGLTLYRLDAIMAGDIAEIVDALRAHYQ 344


>gi|94264473|ref|ZP_01288261.1| Peptide chain release factor 2 [delta proteobacterium MLMS-1]
 gi|93455104|gb|EAT05328.1| Peptide chain release factor 2 [delta proteobacterium MLMS-1]
          Length = 303

 Score =  228 bits (582), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 153/302 (50%), Positives = 214/302 (70%)

Query: 53  DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112
            N +   + ++    +  ILLELA+ E+D    QE + +L+ ++  +   + E + SGE 
Sbjct: 2   QNLVDAFRAVEAAGEEAEILLELAIAEEDRETEQEVAGHLKNLESRLAELELECMFSGEH 61

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+N+A L +HAGAGGTE+QDW  +LLRMY RWAE + F T+ L++  G+EAGIK  T+++
Sbjct: 62  DANNAILTIHAGAGGTEAQDWVEILLRMYLRWAENKGFTTDTLDLLPGDEAGIKGVTVMV 121

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG  AYG+L+ E G+HRLVRISP+D+  RRHTSF+S++++P + D I +E+++ D RIDT
Sbjct: 122 KGRWAYGYLRSEMGIHRLVRISPFDTGGRRHTSFASVFIFPELTDDIAVEVNDKDLRIDT 181

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +RASGAGGQHVN T SA+RITH+PTG+V QCQ ERSQH+NK  A  ML+A+LYE +  +R
Sbjct: 182 FRASGAGGQHVNKTSSAIRITHLPTGIVAQCQNERSQHRNKDTAMKMLKAQLYERQQAQR 241

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            E        K EI WG QIRSYVLQPY++VKD RT+ E  +   VLDG++D F+K+ L 
Sbjct: 242 REDQEHLHGDKKEIAWGSQIRSYVLQPYRLVKDHRTDHETGNVDSVLDGNIDPFIKSYLL 301

Query: 353 IK 354
            +
Sbjct: 302 WR 303


>gi|289423330|ref|ZP_06425138.1| peptide chain release factor 1 [Peptostreptococcus anaerobius
           653-L]
 gi|289156261|gb|EFD04918.1| peptide chain release factor 1 [Peptostreptococcus anaerobius
           653-L]
          Length = 354

 Score =  228 bits (582), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 115/351 (32%), Positives = 182/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D       +   L+ K  DP +  +    + LM+E   L+  +   +E +        
Sbjct: 1   MLDKLMVLEDKYKELSEKVADPEIISDQPTWQKLMKENSELEPIVMKYREYRKVNETIAE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             ++  EE D  + +     L   + ++   +       +     D  +  +E+  GAGG
Sbjct: 61  SKQILEEESDEDLRELAKMELSEAESQIVDIEDELKLLLVPKDPNDEKNVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE++ +KT  +  ++    G K  + LIKG  AY  LK E GV
Sbjct: 121 DEAALFAGDLFRMYSRYAERKGWKTSLMSSNETGVGGYKEVSFLIKGKGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS +++ V P   D +E++I+  D R D +RASG GGQ VNTTD
Sbjct: 181 HRVQRIPTTESGGRIHTSTATVAVLP-EVDDVEVQINPEDLRFDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG VV CQ E+SQ KNK +A  +L+A+LY+  L  +++   I    K+++G
Sbjct: 240 SAVRLTHIPTGEVVSCQDEKSQLKNKEKALKVLKARLYDRALADQQKE--ISAERKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R N+        +DGD+D+ +   + + +
Sbjct: 298 TGDRSERIRTYNF-PQGRVSDHRINLTLYKLDSFIDGDIDEMIDGLITVDQ 347


>gi|90417703|ref|ZP_01225615.1| peptide chain release factor 2 [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90337375|gb|EAS51026.1| peptide chain release factor 2 [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 321

 Score =  228 bits (582), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 218/309 (70%), Positives = 251/309 (81%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD AI  +  +   L DN+ L+ +  EE D  I++E    ++ IK E + +Q E
Sbjct: 1   MRERQFLDTAIGAVNRLNQSLQDNIELIAMGEEEKDAEIVKEAEAAIREIKSEADKRQIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEADSND Y+EVH+GAGGTESQDWA ML RMY RWAE+ KFK E LE H GEEAGI
Sbjct: 61  TLLSGEADSNDTYVEVHSGAGGTESQDWAAMLQRMYMRWAERAKFKVEVLEEHSGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLLIKG NAYGW+K E GVHRLVRISPYDS +RRHTSF+S+WVYPVVDDSI+I+++E
Sbjct: 121 KSATLLIKGHNAYGWMKTESGVHRLVRISPYDSQARRHTSFASVWVYPVVDDSIDIDVNE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD RIDTYRASGAGGQHVNTTDSAVRITH+ TG+VVQCQ ERSQHKN+A AWNMLRA+LY
Sbjct: 181 SDVRIDTYRASGAGGQHVNTTDSAVRITHLETGIVVQCQAERSQHKNRATAWNMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL++RE  AN   +SKT+IGWG QIRSYVLQPYQMVKDLRT IE TSP DVLDG LD 
Sbjct: 241 EAELERRENAANAEAASKTDIGWGHQIRSYVLQPYQMVKDLRTGIESTSPQDVLDGGLDP 300

Query: 346 FMKATLAIK 354
           FM+  LA +
Sbjct: 301 FMEGALAHR 309


>gi|217967194|ref|YP_002352700.1| peptide chain release factor 1 [Dictyoglomus turgidum DSM 6724]
 gi|226739103|sp|B8E003|RF1_DICTD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|217336293|gb|ACK42086.1| peptide chain release factor 1 [Dictyoglomus turgidum DSM 6724]
          Length = 367

 Score =  228 bits (582), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 117/347 (33%), Positives = 187/347 (53%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +        +  +  + + L++ER  ++  +   +E +  L +   L E+
Sbjct: 10  LEEIEKRFEEIEGLLAKEDVISDFNKYQSLLKERAKIEEIVDKFREYKRLLKEKEDLEEM 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  +       L+ I+ ++E  +FE           D  +  +E+ AG GG E+ 
Sbjct: 70  VKEEQDEDLRSLAETELEDIQEKLEKVEFELKALLLPKDPNDEKNIIMEIRAGTGGEEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY  +A+K+ +K E +  +     G K    +++G  AY  LK E GVHR+ 
Sbjct: 130 LFAADLFRMYLGYAQKKGWKVEIVSSNPTGLGGFKEIIFIVEGKGAYSRLKFESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P   + IE+EI   D RI+T+R+ GAGGQHVN T+S VR
Sbjct: 190 RVPITESSGRIHTSTATVAVLP-EMEEIEVEIDPKDLRIETFRSGGAGGQHVNKTESGVR 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIP+G+VVQCQ ERSQH+N+ +A  +LRA+LYE    +RE+   I    + ++G G +
Sbjct: 249 ITHIPSGIVVQCQDERSQHQNREKAMKVLRARLYEYY--QREKENEIASQRRQQVGTGER 306

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              IR+Y   P + V D R N       +VL G+LD+F+   +  +K
Sbjct: 307 SEKIRTYNF-PQRRVTDHRINYSSFQLEEVLSGELDEFIDRLILAEK 352


>gi|333029894|ref|ZP_08457955.1| Peptide chain release factor 1 [Bacteroides coprosuis DSM 18011]
 gi|332740491|gb|EGJ70973.1| Peptide chain release factor 1 [Bacteroides coprosuis DSM 18011]
          Length = 361

 Score =  228 bits (582), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 102/346 (29%), Positives = 172/346 (49%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ V R   ++T   DP +  +      L +E + L + ++  KE    L       E+
Sbjct: 10  LEDLVARFDEVSTLITDPAVIADQTRFVKLTKEYKELSDLMNARKEYIAALQGVTEAKEI 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L+  +  +   +       +     D  +A +E+ AG GG E+ 
Sbjct: 70  IAHESDPEMKEMAREELEDCETRIPELEETIKLLLIPKDPQDERNAIMEIRAGTGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++ E + +  E    ++G   G K     + G N YG LK E GVHR+ 
Sbjct: 130 LFAGDLFRMYSKYCENKGWTVEINNFNEGTAGGFKEIVFSVSGDNVYGILKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P   + +++E++ +D  + T R+ GAGGQHVN  ++ V 
Sbjct: 190 RVPETESQGRVHTSAITVAVLP-EAEEVDVELNPADIELQTARSGGAGGQHVNKVETKVM 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +TH PTG+VV CQ+ RSQH N+ +A  +LR+KLYE+E +K  +     E  K+ +  G +
Sbjct: 249 LTHKPTGLVVICQEGRSQHSNREKAMQILRSKLYEIEYEKANKER--SEQRKSLVSTGDR 306

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              IR+Y   P   + D R N    +    +DGD+ D +   +  +
Sbjct: 307 SAKIRTYNY-PQGRITDHRINYTIYNLQAFMDGDIQDCIDHLIVAE 351


>gi|282880596|ref|ZP_06289302.1| putative peptide chain release factor 2 [Prevotella timonensis CRIS
           5C-B1]
 gi|281305491|gb|EFA97545.1| putative peptide chain release factor 2 [Prevotella timonensis CRIS
           5C-B1]
          Length = 374

 Score =  228 bits (582), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 128/357 (35%), Positives = 206/357 (57%), Gaps = 12/357 (3%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
            +   L    + D           +T+ P  W++   A+  M + + ++  +   ++++ 
Sbjct: 12  ERTQALHHYLNIDQKKIEFEEEQLRTQAPDFWEDPQRAQEQMIKVKGIEKWLKGYEQVRQ 71

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              +  +  E     DD    +E   +  +    +E  + +++L  + D  D  +++++G
Sbjct: 72  MADELQLAYEFY--RDDMVTEEELDHDYAKAIAAIEDLELKNMLRQKEDPMDCVMKINSG 129

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWLKG 183
           AGGTESQDWA ML+RMY RWAE   +K    +I DGEEAGIKS T+ I+    AYG+LK 
Sbjct: 130 AGGTESQDWAQMLMRMYMRWAEAHDYKCTVSDIQDGEEAGIKSVTMKIEGNEYAYGFLKS 189

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SP+++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ+V
Sbjct: 190 ENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDTIEVFVDPACVSWDTFRSSGAGGQNV 249

Query: 244 NTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           N  +S VR+ +            ++++  + R Q KN+A+A  +L+++LY+  ++KR E 
Sbjct: 250 NKVESGVRLRYQYHDPDTGEEEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRLEA 309

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E+ K +I WG QIRSYV    + VKD RTN + T    V+DG +DDF+KA L 
Sbjct: 310 QAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTTDVDGVMDGKIDDFIKAYLM 365


>gi|299144121|ref|ZP_07037201.1| peptide chain release factor 1 [Peptoniphilus sp. oral taxon 386
           str. F0131]
 gi|298518606|gb|EFI42345.1| peptide chain release factor 1 [Peptoniphilus sp. oral taxon 386
           str. F0131]
          Length = 356

 Score =  228 bits (582), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 109/342 (31%), Positives = 185/342 (54%), Gaps = 11/342 (3%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           ++   L  K  D ++  +    + +  E   ++  +   +E +  + +     E+  E  
Sbjct: 10  EKYIELEQKLMDINVINDSKLYQKIAIEHAEIEPVVLKYREYKTLISNLEDNKEMLNENL 69

Query: 81  DCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           D  +     ++++  + ++   +       +     DS +  +E+ AGAGG E+  +A +
Sbjct: 70  DDDMRDLIKEDIKDSEEKISVLEDEIKILLIPKDPNDSKNVIVEIRAGAGGDEAALFAGV 129

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L R Y R+AE+  +K E +  ++    G K    +I G  AY  LK E GVHR+ R+   
Sbjct: 130 LFRQYVRFAERMGWKVEIMSTNEIGIGGYKEVIFMILGRGAYSRLKYESGVHRVQRVPET 189

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S+ R HTS +++ V P   + +EI+I  SD + D +RASG GGQ VNTTDSAVR+THIP
Sbjct: 190 ESSGRIHTSTATVAVLP-EAEDVEIDIEPSDIKFDVFRASGNGGQCVNTTDSAVRLTHIP 248

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+V+ CQ E+SQ +NK +A  +L+ KLY+L+LQ++    ++ +  K++IG G    +IR
Sbjct: 249 TGIVISCQDEKSQLRNKEKAMKILKTKLYDLKLQEQNAELSMQK--KSQIGTGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   V D R  +       ++DGDLD+ + A +A  +
Sbjct: 307 TYNY-PQGRVTDHRIGLTLHKIDSIVDGDLDEIIDALIASDQ 347


>gi|239628684|ref|ZP_04671715.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239518830|gb|EEQ58696.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 357

 Score =  228 bits (582), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 116/351 (33%), Positives = 189/351 (53%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D+ +     L     DP + Q+      LM+E+  L   +   K+ +    D   
Sbjct: 1   MFDRLDDMLIHYEELMLMLGDPAVTQDTKRFTRLMKEQADLAPIVEAYKQYKQAKQDVED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
            L L  EE+D  + +   + L   K  +E  + E           D  +  LE+ AGAGG
Sbjct: 61  SLALLEEENDEEMREMAKEELSDAKKRIEELEHELKILLLPKDPNDDKNIILEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+ +A+  ++K E + +++    G K    ++ G  AY  LK E GV
Sbjct: 121 DEAALFAAELYRMYSNYADSHRWKVEIISLNENGIGGFKEVVAMVTGKGAYSKLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + ++++I  +D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVMP-EAEEVDVQIDMNDIRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+V+  Q E+SQ +NK +A+ +LR+KLY++EL+KR+  ++  E  +++IG
Sbjct: 240 SAVRLTHMPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDIELEKRQ--SSEAEERRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++GD+ + +   +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLYKIDSIMNGDIQELLDNLIAADQ 347


>gi|307823419|ref|ZP_07653648.1| peptide chain release factor 1 [Methylobacter tundripaludum SV96]
 gi|307735404|gb|EFO06252.1| peptide chain release factor 1 [Methylobacter tundripaludum SV96]
          Length = 361

 Score =  228 bits (582), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 108/346 (31%), Positives = 181/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N  +R   +     +P +  N  + + L +E   ++  +   K  Q  L       E+
Sbjct: 9   LENLCERYDEIAALLSEPEVQGNQNKFRSLSQEYAQINPLVDCYKRYQQTLESLASAKEM 68

Query: 76  ALEEDDCSILQETS---DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           A + D            D   +++      Q   L     D+ + ++E+ AG GG E+  
Sbjct: 69  ANDSDPELREMAKEEVNDAENQLEAIEHELQVLLLPKDPNDNRNIFIEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY R+AE++ ++TE +    G+  G K   L + G + Y  LK E G HR+ R
Sbjct: 129 FSGDLARMYQRYAERKGWQTEIINESHGDHGGYKEVILRVAGKDVYSQLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ + P VD+   I+I+ +D ++DT+RASGAGGQH+N T+SA+RI
Sbjct: 189 VPETESQGRIHTSACTVAIMPEVDEVDAIDINPADLKVDTFRASGAGGQHINKTESAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTGVVV+CQ ERSQHKN+A+A ++L ++L   E +K         + K ++G G   
Sbjct: 249 THVPTGVVVECQDERSQHKNRARAMSLLASRLLSAEQEKHHAEQ--SATRKLQVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N+      D++ G L+  ++  ++  +
Sbjct: 307 ERIRTYNY-PQGRLTDHRINLTLYKLDDIMQGGLEQVIQPLISEHQ 351


>gi|295677813|ref|YP_003606337.1| peptide chain release factor 1 [Burkholderia sp. CCGE1002]
 gi|295437656|gb|ADG16826.1| peptide chain release factor 1 [Burkholderia sp. CCGE1002]
          Length = 360

 Score =  228 bits (582), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 175/344 (50%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN       +  N+ + + L RE   L   +      +    D     EL
Sbjct: 9   LDQLTTRLAELNDLLSREDITANLDQYRKLTREHAELGPVVEHYGLWRQAQNDAATAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +       +E     +          Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 69  LADASMRDFAEEEIRAARDRMETLGVELQKMLLPKDPNDERNIFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE+ +++ E +   + +  G +   + I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYLRYAERNRWQVEMMSASESDLGGYREVIVRIAGDAAYSKLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQHKNK +A  +L A++ +   Q  E+      + K  IG G    +
Sbjct: 249 LPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QTHEQQTKEAATRKNLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++DGDL++ + A ++  +
Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYRLDAIMDGDLEELIAALVSEHQ 349


>gi|296170240|ref|ZP_06851833.1| peptide chain release factor RF1 [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295895116|gb|EFG74834.1| peptide chain release factor RF1 [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 357

 Score =  228 bits (582), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 117/346 (33%), Positives = 169/346 (48%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L  +  DP L  N  EA+   R    L   ++  ++++    D     EL
Sbjct: 8   IDVLLAEHAELEQRLADPDLHSNPAEARKAGRRFARLAPIVATYRKLESARGDLETAREL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A +++  +                             D++D  LEV +G GG ES  +A 
Sbjct: 68  AADDESFADEVTELAARVAELDTQLTDML--APRDPHDADDIVLEVKSGEGGEESALFAA 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190
            L RMY R+AE+  +    L+    +  G K ATL I          +  +K E GVHR+
Sbjct: 126 DLARMYIRYAERHGWNVTVLDETTSDLGGYKDATLSIASKGDSADGVWSRMKFEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + VYP  ++  E+ I ESD RID YR+SG GGQ VNTTDSAV
Sbjct: 186 QRVPVTESQGRVHTSAAGVLVYPEPEEVGEVHIDESDLRIDVYRSSGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG+VV CQ ERSQ +NKA+A  +L A+L  +  ++    A+   +S+   +   
Sbjct: 246 RITHLPTGIVVTCQNERSQLQNKARALQVLAARLQAMAEEQALADASADRASQIRTVDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R   +  +   VLDGDLD    A  A  K
Sbjct: 306 ERIRTYNF-PENRITDHRIGYKAHNLDQVLDGDLDAMFDALGAADK 350


>gi|73662075|ref|YP_300856.1| peptide chain release factor 1 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|119361617|sp|Q49Z65|RF1_STAS1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|72494590|dbj|BAE17911.1| peptide chain release factor 1 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 358

 Score =  228 bits (582), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 112/351 (31%), Positives = 184/351 (52%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  N    +   +E+  L   +   ++ +    D   
Sbjct: 1   MFDQLDIVEERYEQLNEMLSDPDVVNNPDNLRKYSKEQAELQKTVDVYRDYKQTKEDISE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
           + E+  +  D   ++   +  Q ++ +V   +    F  +     D  D  +E+ A AGG
Sbjct: 61  VEEMLRDTKDNDEIEMLKEEHQTLQNKVPKLEEELKFLLIPKDPNDDKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+++AE   +KT+ +E+ + +  G K  +  + G  A+  LK E G 
Sbjct: 121 DEAAIFAGDLFRMYSKYAETLNYKTDIVEVTESDHGGYKEISFSVSGNGAFSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EIE+   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEVRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTGV+     E+SQ +N+ +A  +L+A+L++++LQ  EE        K+ +G
Sbjct: 240 SAVRITHIPTGVIATSS-EKSQIQNREKALKVLKARLFDMKLQ--EEQQKYAAQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G LD+ + A    ++
Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIIDALTLAEQ 346


>gi|148266072|ref|YP_001232778.1| peptide chain release factor 1 [Geobacter uraniireducens Rf4]
 gi|189039974|sp|A5G8T7|RF1_GEOUR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|146399572|gb|ABQ28205.1| bacterial peptide chain release factor 1 (bRF-1) [Geobacter
           uraniireducens Rf4]
          Length = 355

 Score =  228 bits (582), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 106/343 (30%), Positives = 178/343 (51%), Gaps = 9/343 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +   +R   L     DP +  N  E + L RE   L   +   +  +  L +   
Sbjct: 1   MFEKIEELERRYQELEALLADPAVLGNQPEFRKLSREHSDLSALVESYRNYKKVLVEITG 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTES 130
             EL  + +   + +   + L+  +  +E + +   L     D+    LE+ AG GG E+
Sbjct: 61  NRELLADPEMKEMAEAELEALEEQQAALEAEIKLLLLPKDPNDNKSVILEIRAGTGGDEA 120

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+AE  +++ E +   + E+ G K     ++G   +  LK E G HR+
Sbjct: 121 ALFAGDLFRMYGRYAESNRWRVEVISASESEKGGFKEIVASVEGDGVFAKLKYESGTHRV 180

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS  ++ + P   + ++I+I+ +D +ID YR+SGAGGQHVNTTDSAV
Sbjct: 181 QRVPETEAQGRIHTSACTVAIMP-EAEDVDIDINPADLKIDVYRSSGAGGQHVNTTDSAV 239

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG VV CQ+ERSQ KN+A+A  +L+ ++ +  +Q  E+ A +    K ++G G 
Sbjct: 240 RITHLPTGTVVACQEERSQIKNRAKAMKVLKTRILDTIMQ--EQSARLAADRKQQVGSGD 297

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              +IR+Y   P   + D R  +       ++ GD+ +   + 
Sbjct: 298 RSERIRTYNF-PQGRMTDHRIGLTLYRLDAIMAGDIGEITDSL 339


>gi|237807596|ref|YP_002892036.1| peptide chain release factor 1 [Tolumonas auensis DSM 9187]
 gi|259585258|sp|C4LBL5|RF1_TOLAT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|237499857|gb|ACQ92450.1| peptide chain release factor 1 [Tolumonas auensis DSM 9187]
          Length = 362

 Score =  228 bits (582), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 119/339 (35%), Positives = 183/339 (53%), Gaps = 5/339 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     +P++  +  + + L RE   L   ++  ++ Q    D   + E+
Sbjct: 9   LEGLMERYEEVQALLGEPNVVSDQDKFRALTREYSQLGEVVAGFQQYQQAEADLQAIEEM 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
              +D         +     Q I+      Q   L     D ++ +LE+ AGAGG E+  
Sbjct: 69  LSGDDAEMKAMAQEELAEAKQLIERVEAELQVLLLPKDPKDDSNCFLEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY++++E+R ++ E +   DGE  G K   + ++G + YG +K E G HR+ R
Sbjct: 129 FAGDLFRMYSKYSERRGWRMEIMSTSDGEHGGYKEIIVRMEGDSVYGIMKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P + +    EI+ +D RIDT+RASGAGGQH+N TDSA+RI
Sbjct: 189 VPETESQGRVHTSACTVMVLPEIPEKEIPEINPADLRIDTFRASGAGGQHINKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQ 311
           THIPTG VV+CQ ERSQHKNKA+A ++L A+L + E  KR   A+    S    G    +
Sbjct: 249 THIPTGTVVECQDERSQHKNKARAMSVLAARLAQQEEDKRRAEADSTRRSILSTGDRSDR 308

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   V D R N+     S+V++GDLD  +K  
Sbjct: 309 IRTYNY-PQGRVSDHRINLTLYRLSEVMEGDLDSLLKPL 346


>gi|297539749|ref|YP_003675518.1| peptide chain release factor 1 [Methylotenera sp. 301]
 gi|297259096|gb|ADI30941.1| peptide chain release factor 1 [Methylotenera sp. 301]
          Length = 360

 Score =  228 bits (581), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 176/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +RL  +N       +  N+   + L +E   +   +      +    D      +
Sbjct: 9   LATLSERLEEINRLMSSEGVTNNMDNYRKLTQEHAEITPIVEQYHLFEQAEADIKEAQSM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D     QE  +  +    +VE   Q   L     D  + +LE+ AG GG ES  + 
Sbjct: 69  LSDPDMKEFAQEEIEAGKEKLEQVEKSLQVLLLPKDPNDDKNLFLEIRAGTGGDESGLFC 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AEK+K+K E +  ++ E  G K     I+G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEKQKWKVEIMSANESEVGGYKEIIAKIEGYGAYSKLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  ++ I+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 DTETQGRIHTSACTVAVLPEADEVSDVVINPADIRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            PTG+VV+CQ+ RSQH NKAQA  +L A++   ++ ++   + I    K+ IG G    +
Sbjct: 249 APTGIVVECQEGRSQHANKAQAMAVLAARIKAKQVDEQN--SKIASERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       + +GD+D+ + A  A  +
Sbjct: 307 IRTYNY-PQGRITDHRINLTLYKIDAITEGDMDELIGALSAEHQ 349


>gi|123442667|ref|YP_001006644.1| peptide chain release factor 1 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|332161451|ref|YP_004298028.1| peptide chain release factor 1 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|166223618|sp|A1JRU0|RF1_YERE8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|122089628|emb|CAL12478.1| peptide chain release factor 1 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|318605428|emb|CBY26926.1| peptide chain release factor 1 [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325665681|gb|ADZ42325.1| peptide chain release factor 1 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 360

 Score =  228 bits (581), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 115/337 (34%), Positives = 176/337 (52%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D ++  +    + L RE   L +     KE +    D      +
Sbjct: 9   LEALQERHEEVLAHLGDANVIADQDRFRALSREYAQLTDVTRCFKEWRSVQDDIEAAEMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+       R +   +  Q   L     D  D +LE+ AG GG E+  +A
Sbjct: 69  LDDPEMREMAQDELKEAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             + RMY+R+AE R++K E +   +GE  G K     + G   +G LK E G HR+ R+ 
Sbjct: 129 GDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGDGVFGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR++        +  +G G    +
Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQQ--AEASERRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQ 342


>gi|28868324|ref|NP_790943.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|32171519|sp|Q888C1|RF1_PSESM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|28851561|gb|AAO54638.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 360

 Score =  228 bits (581), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 117/346 (33%), Positives = 176/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  ++  K++     D      L
Sbjct: 9   LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYKQLARVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +  +  +         Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LKDSDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+RI
Sbjct: 189 VPKTESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+P+G+VV+CQ+ERSQHKN+A+A + L AKL +   Q     + I    K  +G G   
Sbjct: 249 THLPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAASAIASERKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+   S  +VL G +D  ++  LA  +
Sbjct: 307 ERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQ 351


>gi|238755548|ref|ZP_04616886.1| Peptide chain release factor 1 [Yersinia ruckeri ATCC 29473]
 gi|238706228|gb|EEP98607.1| Peptide chain release factor 1 [Yersinia ruckeri ATCC 29473]
          Length = 360

 Score =  228 bits (581), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 117/337 (34%), Positives = 174/337 (51%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     KE Q    D      +
Sbjct: 9   LEALQERHEEVEAHLGDATVIADQDRFRALSREYAQLTDVTRCFKEWQSVQEDIETAEMM 68

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   +  +E  D   R +   +  Q   L     D    +LE+ AG GG E+  +A
Sbjct: 69  LDDPEMREMAQEELKDARTRSEALEQQLQVLLLPKDPDDERGCFLEIRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             + RMY+R+AE R++K E +   DGE  G K     + G   YG LK E G HR+ R+ 
Sbjct: 129 GDMFRMYSRYAEARRWKVEVMSASDGEHGGYKEIIAKVSGEGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVMPEIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR+         +  +G G    +
Sbjct: 249 LPTGLVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQ--LAEASERRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQ 342


>gi|113869288|ref|YP_727777.1| peptide chain release factor 1 [Ralstonia eutropha H16]
 gi|113528064|emb|CAJ94409.1| protein chain release factor A (RF-1) [Ralstonia eutropha H16]
          Length = 356

 Score =  228 bits (581), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 114/344 (33%), Positives = 175/344 (50%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  +N           + + + L RE   L        + +    D      L
Sbjct: 5   LDQLAERLDEVNALLAREDATAKIDQYRKLSREHAELSPVAEQYGQYRQAQDDLATAQAL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +      +   + +     +E   Q   L     D  +  LE+ AG GG ES  +A
Sbjct: 65  LDDPEMKDFAADEIASARARLEGLEASLQRLLLPKDPNDDRNLLLEIRAGTGGEESALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE+++++ E +     +  G K   + I G  A+  LK E G HR+ R+ 
Sbjct: 125 GDLLRMYTRYAERQRWQVEVMSESASDLGGYKEVIVRIAGDAAFSRLKFESGGHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQHVN TDSAVR+TH
Sbjct: 185 ATEAQGRIHTSACTVAVMPEADEVGEVEINPADLRIDTFRASGAGGQHVNKTDSAVRLTH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NK +A  +L A++ +  +Q R   A    + +  IG G    +
Sbjct: 245 LPTGIVVECQDDRSQHRNKDKAMKVLAARIKD--MQTRAAQAKEASTRRNLIGSGDRSDR 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       ++DGD+D+ + A  +  +
Sbjct: 303 IRTYNF-PQGRVTDHRINLTLYKIDMIMDGDMDELLSALASEHQ 345


>gi|194016506|ref|ZP_03055120.1| peptide chain release factor 1 [Bacillus pumilus ATCC 7061]
 gi|194011979|gb|EDW21547.1| peptide chain release factor 1 [Bacillus pumilus ATCC 7061]
          Length = 355

 Score =  228 bits (581), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 108/351 (30%), Positives = 177/351 (50%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D   +  +R   LN    DP +  +  + +   +E+  +   +   ++ +        
Sbjct: 1   MLDRLKSIEERYEKLNEYLSDPEVVNDPKKLREYSKEQSDIQETVEVYRQYRAAYDQLSE 60

Query: 72  LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +  E+ D  +     +      +  +   +  +   +     D+ +  +EV   AGG
Sbjct: 61  AKAMLEEKLDAEMRDMVKEEISELTEETERLEDELKILLIPKDPNDNKNVIVEVRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE +E +     G K    +I G  AY  LK E G 
Sbjct: 121 EEAALFAGNLYRMYSRYAEMQGWKTEVMEANVTGTGGYKEIIFMISGKGAYSRLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EAEEVEIDIHEKDIRVDTFTSSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    +RE  A   ++ K+ +G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKF--QREAQAEYDQTRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+G LD+ + A +   +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVIDALIMEDQ 347


>gi|251789676|ref|YP_003004397.1| peptide chain release factor 1 [Dickeya zeae Ech1591]
 gi|247538297|gb|ACT06918.1| peptide chain release factor 1 [Dickeya zeae Ech1591]
          Length = 360

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 115/337 (34%), Positives = 176/337 (52%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     +P +  ++   + L RE   L +     +  Q    D      +
Sbjct: 9   LEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQCWQQTQDDLATAELM 68

Query: 76  ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +      +E        +   +  Q   L     D    +LE+ AG GG E+  +A
Sbjct: 69  LDDPEMRDLAQEELKAAKAASETLEQQLQVLLLPKDPDDERGCFLEIRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R++K E +   DGE  G K     + G  AYG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESRRWKVEIMSASDGEHGGYKEMIAKVVGDGAYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P V ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEVPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLAARIRAAEMQKRQQE--EASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           IR+Y   P   V D R N+      + ++G LD  ++
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEAIEGKLDMLIQ 342


>gi|149910167|ref|ZP_01898813.1| putative peptide chain release factor 2 [Moritella sp. PE36]
 gi|149806753|gb|EDM66717.1| putative peptide chain release factor 2 [Moritella sp. PE36]
          Length = 301

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 160/298 (53%), Positives = 213/298 (71%), Gaps = 1/298 (0%)

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
            +  I ++     D   L+ELA+E +D     E    +  ++ ++   +F  + SG+ D+
Sbjct: 2   IVKTIDDLGTGCDDVEGLVELAVEAEDEETFAEAQHEIIGLEAQLAKLEFRRMFSGKHDA 61

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
           ND YL++ +G+GGTE+QDWANMLLRM+ RW E  KFK E +E+  G+ AGIK AT+ + G
Sbjct: 62  NDCYLDIQSGSGGTEAQDWANMLLRMFLRWGEAHKFKVELIEVSSGDVAGIKGATIRLGG 121

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             AYGWL+ E GVHRLVR SP+DS+ RRHTSF+SI+VYP +DDSIEI+++ SD RID YR
Sbjct: 122 EYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASIFVYPEIDDSIEIDLNPSDLRIDVYR 181

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASGAGGQHVNTT+SAVRITH+PT +VVQCQ +RSQHKNK  A   +RAKL++ E+QK+  
Sbjct: 182 ASGAGGQHVNTTESAVRITHLPTNLVVQCQNDRSQHKNKDAAMKQMRAKLFDHEMQKQNA 241

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              I E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 242 EKQIAEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLK 298


>gi|94500021|ref|ZP_01306556.1| peptide chain release factor 1 [Oceanobacter sp. RED65]
 gi|94427879|gb|EAT12854.1| peptide chain release factor 1 [Oceanobacter sp. RED65]
          Length = 363

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 177/346 (51%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +R   +     D  +  +  + + L +E   ++  +    +      +      L
Sbjct: 9   LQTLDERYEEIGHLLSDAGVISDQNKFRELSKEYAEIEPVVKAFAQYTQAEENLAEAEAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           A ++D         +     +         Q   L     D  +  LE+ AG GG E+  
Sbjct: 69  AKDDDPDMREMGQEEYSAAKEEIERLDGELQILLLPKDPNDGKNVILEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMYTR+AEKR +K E +  ++GE  G K     I G   YG LK E G HR+ R
Sbjct: 129 FSGDLFRMYTRYAEKRGWKCEVMSANEGEHGGYKEVITRIAGDGVYGQLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P +++  +++I+++D RIDT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPATESQGRIHTSACTVAVMPEIENEDDVDINKADLRIDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ+ERSQHKN+A+A ++L  +L +  +QK +         K+ +G G   
Sbjct: 249 THLPTGLVVECQEERSQHKNRAKAMSILATRLNDAVVQKAQAEQ--AAERKSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+      +++ GD+D  ++  L   +
Sbjct: 307 ERIRTYNY-PQGRVSDHRINLTVYKLDELMQGDVDMIIQPLLQEHQ 351


>gi|253583342|ref|ZP_04860540.1| peptide chain release factor RF1 [Fusobacterium varium ATCC 27725]
 gi|251833914|gb|EES62477.1| peptide chain release factor RF1 [Fusobacterium varium ATCC 27725]
          Length = 358

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 117/347 (33%), Positives = 181/347 (52%), Gaps = 10/347 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   LN     P +  +  +     +    +   +   KE +  + D   + E 
Sbjct: 5   LEEVVKRFDELNELLGSPEVLADPKKMMECNKSLSDITPIVEKYKEYKRVIEDFDFIKEN 64

Query: 76  ALEEDDCSILQETSDNLQRIKL----EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L+ ++       +  +   L   E D  +  +E+  GAGG E+ 
Sbjct: 65  LKTEKDQEMKEMMHEELKELEESIPELEKELKVLLLPKDENDDKNVIIEIRGGAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE++K+K E +E  +    GIK     I G  AY  LK E GVHR+ 
Sbjct: 125 LFAGNLFRMYSRYAERKKWKIEIIEKQEMGIGGIKEVVFSINGFGAYSRLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P V+D  E++I   D +IDTYR+ GAGGQHVN TDSAVR
Sbjct: 185 RVPETESAGRVHTSTATVAVLPEVEDVKEVKIDPRDLKIDTYRSGGAGGQHVNMTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG++VQCQ ERSQ KN+ +A   L +KL+E+E +K+   + +    + ++G G  
Sbjct: 245 ITHLPTGIIVQCQDERSQLKNREKAMKHLASKLFEMECEKQR--SQVESERRLQVGTGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R           LDGDLD+ + A +   +
Sbjct: 303 SEKIRTYNF-PQGRITDHRIKFTVYQLEAFLDGDLDEMIDALITFSQ 348


>gi|187734557|ref|YP_001876669.1| peptide chain release factor 1 [Akkermansia muciniphila ATCC
           BAA-835]
 gi|238691860|sp|B2UL99|RF1_AKKM8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|187424609|gb|ACD03888.1| peptide chain release factor 1 [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 358

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 116/345 (33%), Positives = 176/345 (51%), Gaps = 10/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72
            +   QRL  L T   +P  + +  +A  +MRE + L   +     +   + +L DN  L
Sbjct: 7   IEKRRQRLEELETVIAEPDFFNDQKKASEIMREHRRLKELMETWDSLNATEQQLADNQEL 66

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +    E       E  +    ++      Q+  L     +  DA +E+ AG GG E+  
Sbjct: 67  AKTDDPELAELAALEIPELEAALEKLRSDVQYSLLPRDTTEDRDAIIEIRAGTGGDEASL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LLRMY R+AE+R ++ E LE    +  G K     I G   + +LK E GVHR+ R
Sbjct: 127 FAGDLLRMYQRFAEERGWRFEHLESSPSDVGGFKEVVCRIAGEEVFRFLKYEGGVHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P   + ++IEI   D RI+  R+ GAGGQHVN T+SAV+I
Sbjct: 187 VPATETQGRIHTSTATVAVMP-EAEEVDIEIRPEDLRIEVCRSGGAGGQHVNKTESAVQI 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
            HIPTGV V+C++ERSQ KN+ +   +LRAKL+  E +KREE      + +  IG G   
Sbjct: 246 WHIPTGVYVRCEEERSQMKNREKGMKILRAKLF--EAKKREEAEKYSAARRNLIGSGGRE 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +IR+Y   P   + D R      +   +L G L+D + A    +
Sbjct: 304 EKIRTYNF-PQNRLTDHRIGYTSHNLDGILMGQLEDLIMALQHAE 347


>gi|331018122|gb|EGH98178.1| peptide chain release factor 1 [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 360

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 117/346 (33%), Positives = 176/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  ++  K++     D      L
Sbjct: 9   LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYKQLARVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +  +  +         Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LKDSDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+P+G+VV+CQ+ERSQHKN+A+A + L AKL +   Q     + I    K  +G G   
Sbjct: 249 THLPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAASAIASERKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+   S  +VL G +D  ++  LA  +
Sbjct: 307 ERIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQ 351


>gi|330719389|ref|ZP_08313989.1| peptide chain release factor 1 [Leuconostoc fallax KCTC 3537]
          Length = 359

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 110/350 (31%), Positives = 173/350 (49%), Gaps = 9/350 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            +F+     V R   LN    DP +  +      L +E   +   ++  K+ Q  L D  
Sbjct: 3   KIFEQLQTVVDRHDELNELLADPEVMSDSKRYMALSKEEGSIRETVTVFKQYQSVLQDIQ 62

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTE 129
              +L  + D   + ++    L+  K  +E + +   L     D  +  +E+   AGG E
Sbjct: 63  DAEDLLDDTDMAELARDDLKTLKPQKASLEEQLKVLMLPQDPNDDKNIIMEIRGAAGGDE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           S  +A  LL MY ++AEK+ +    ++    E  G K   ++I G N Y  LK E G HR
Sbjct: 123 SSLFAADLLDMYRKYAEKQNWHINLIDESATEVGGYKEVVVMITGNNVYSKLKFESGAHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE-ISESDCRIDTYRASGAGGQHVNTTDS 248
           + R+   ++  R HTS +++ V P  +D    + I   D R D YR+SGAGGQHVN T S
Sbjct: 183 VQRVPVTETQGRVHTSTATVGVMPEFEDVDATDLIDPKDVREDVYRSSGAGGQHVNKTSS 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           A+R+TH PTG+ V  Q ERSQ +N+A+AW +L A++Y+   Q+ E      +  KT +G 
Sbjct: 243 AIRLTHEPTGITVAMQDERSQQQNRAKAWKILNARVYDYFAQQNEAE--YAQKRKTAVGT 300

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G    +IR+Y   P   V D R  +       V++G+L+D + A +   +
Sbjct: 301 GDRSERIRTYNF-PQNRVTDHRIGLTLNKLDRVMNGELEDIIDALIIADQ 349


>gi|327398507|ref|YP_004339376.1| peptide chain release factor 2 [Hippea maritima DSM 10411]
 gi|327181136|gb|AEA33317.1| peptide chain release factor 2 [Hippea maritima DSM 10411]
          Length = 359

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 160/354 (45%), Positives = 235/354 (66%), Gaps = 4/354 (1%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           ++L+ ++N +    D     + L  +  + ED  +W +    + L R++  ++  +  ++
Sbjct: 6   IQLADKINKIKEYLDPPKRKKELDDIQKQLEDSSVWNDYQLLQNLKRKQSSIEQKLKTVE 65

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           E+++ +   L L E   +++         DN++ +  +VE  + E+ LSGE D ++A + 
Sbjct: 66  ELENDVDTLLELSEFVEDDESYKQE--LEDNIKELTKKVEKAETETFLSGEHDFSNAIVT 123

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +H+GAGGTES DW +ML RMY+ W +  ++K E +++  G+EAG KS T L+ G  AYG+
Sbjct: 124 IHSGAGGTESCDWVSMLFRMYSMWCDNNEYKIEVMDLQPGDEAGYKSITFLVSGEKAYGY 183

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E GVHRLVRISP+D+N RRHTSF+S+ V P ++D  EI+I   D +IDT+RASGAGG
Sbjct: 184 LKNENGVHRLVRISPFDANKRRHTSFASVSVLPEINDDTEIDIDPKDLKIDTFRASGAGG 243

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QHVN TDSA+RITHIPTG+VV CQ ERSQHKNKA A  +L+AKLY+LE +K+++     E
Sbjct: 244 QHVNKTDSAIRITHIPTGIVVSCQNERSQHKNKAFALKILKAKLYQLEEEKKKKELEKLE 303

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS--DVLDGDLDDFMKATLA 352
             K +I WG QIRSYVL PY+MVKD RT +EK   +   VL+G++DDF++  L 
Sbjct: 304 GEKKKIEWGSQIRSYVLHPYKMVKDHRTGVEKKDVAALAVLNGEIDDFIREALK 357


>gi|261253598|ref|ZP_05946171.1| peptide chain release factor 1 [Vibrio orientalis CIP 102891]
 gi|260936989|gb|EEX92978.1| peptide chain release factor 1 [Vibrio orientalis CIP 102891]
          Length = 362

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 117/346 (33%), Positives = 183/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  N  + + L +E   L+      +  Q    D +   E+
Sbjct: 9   LETLVERYEEVQHLLGDPDVIGNQDKFRALSKEYSQLEEVTKCFQAYQQAQEDLVAAEEM 68

Query: 76  ALEEDDCSILQETS---DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           A E+D+           D  + I+   +  Q   L     D  + +LE+ AGAGG E+  
Sbjct: 69  AKEDDEEMREMAQEEIKDAKETIERLNDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AEK+ ++ E +  ++ E  G K     + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSKFAEKKGWRVEVMSSNESEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RI
Sbjct: 189 VPATESQGRVHTSACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311
           TH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E  KR     + ++ +  +G G + 
Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARIIQAEEAKRAAE--VSDTRRNLLGSGDRS 306

Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             IR+Y   P   V D R N+     ++V++GD+   +   +   +
Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTVYRLNEVMEGDVSCLVDPVIQEHQ 351


>gi|253574239|ref|ZP_04851581.1| peptide chain release factor 1 [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251846716|gb|EES74722.1| peptide chain release factor 1 [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 355

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 107/351 (30%), Positives = 182/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D   +   R   L+    DP +  +    +   +E+  L  A     E ++ + +   
Sbjct: 1   MLDRLQSLADRYEKLSELLCDPDVANDSKRLRDYSKEQSDLQPAYEAYTEYKNVIGELEA 60

Query: 72  LLELALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +  E+ D  + +     ++    R +   E  +   L     D  +  +E+   AGG
Sbjct: 61  AKAMQAEKLDDEMREMVKMEIEELTARQQALEEKIRILLLPKDPNDDKNVIVEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+A+ + ++ E +++++ +  G K    +I G  AY  LK E G 
Sbjct: 121 DEAALFAADLYRMYTRYADSQGWRVEVMDMNESDLGGFKEVIFMINGKGAYSKLKYESGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS S++ V P   + ++IEI + D R+DT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRIPATESGGRIHTSTSTVAVLP-EVEEVDIEILDKDIRVDTFCSSGAGGQSVNTTK 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V  CQ  +SQ+ NK +A  +LRA++Y+  ++++EE A      K+++G
Sbjct: 240 SAVRVTHIPTGIVATCQDGKSQNSNKEKALQVLRARIYD--MKRQEEEAKYAGERKSKVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       V++G+L++ + A    ++
Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTLHKLDQVMNGELEEIVSALTIAEQ 347


>gi|313157406|gb|EFR56829.1| putative peptide chain release factor 2 [Alistipes sp. HGB5]
          Length = 370

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 131/358 (36%), Positives = 205/358 (57%), Gaps = 11/358 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   L    + +     L     KT+ P  W N  +A+  +R    +   +     +
Sbjct: 10  LEQRSGALERCLNIEQKRIDLLNEEEKTQVPDFWDNPDQAREQLRRVAAIKAWVDDYDAV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
              + D  ++ E     +     QE   +  +    +E  +  ++L  + D   A L+++
Sbjct: 70  AKDVEDLALMPEFVK--EGVVSEQEMDAHYAQTLERIEKLEMRNMLRRDEDKLGAILDIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DWA+MLLRMYTRW E   +K + L+   G+E G+KS TL  +G  AYG+LK
Sbjct: 128 AGAGGTEALDWASMLLRMYTRWGEAHGYKVKVLDYQAGDEVGVKSCTLEFEGEYAYGYLK 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHR+VR+SP+++N++R T+F+S++V P VDD+IE+ ++ SD   DT+RASGAGGQ+
Sbjct: 188 SENGVHRMVRLSPFNANNKRQTTFASVFVSPAVDDTIEVTVNPSDIEWDTFRASGAGGQN 247

Query: 243 VNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           VN  ++AVR+ +             +++  + RSQ  N+  A  +L++KLY+ EL KR  
Sbjct: 248 VNKVETAVRLRYHGKDADTGEAVEFLIENMETRSQLMNRENAMRILKSKLYQRELDKRMA 307

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                E+SK +I WG QIRSYV    + VKD RT ++ ++   V+DG LD+F+KA L 
Sbjct: 308 TQQALEASKKKIEWGSQIRSYVFDD-RRVKDHRTGVQTSAVEAVMDGGLDEFIKAYLM 364


>gi|332971801|gb|EGK10749.1| peptide chain release factor RF1 [Desmospora sp. 8437]
          Length = 358

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 115/347 (33%), Positives = 178/347 (51%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  QR   LN    +P +  N    +   +E+  L+       E ++          +
Sbjct: 8   LESIRQRYEELNQLLSNPEVIHNADLLRKYSKEQSDLEPKYHAYCEYKEVADQYEEARIM 67

Query: 76  ALEEDDCSI----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  +      E      R K   E  +   L     D  +  +E+   AGG E+ 
Sbjct: 68  LEEESDPEMLDLVKTELEQLSDRKKALEEEIRLLLLPKDPNDDKNVIVEIRGAAGGEEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+ E+  +K+E L+ +     G K     ++G  AY  LK E G HR+ 
Sbjct: 128 LFAADLYRMYTRYGERMGWKSEILDTNTTGLGGFKEVVFSVQGQGAYSRLKYESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +++EI + D RIDT+ +SG GGQ VNTT SAVR
Sbjct: 188 RVPTTESGGRIHTSTATVAVLP-EAEEVDVEIQDKDLRIDTFCSSGPGGQSVNTTKSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ E+SQ KNK +A  +LRA+L  L+ +++EE A + ++ K ++G G  
Sbjct: 247 ITHLPTGIVVSCQDEKSQIKNKEKAMRVLRARL--LDQKQQEEEAKMADARKVQVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       V+DGDLD+ + A +  ++
Sbjct: 305 SERIRTYNF-PQSRVTDHRIGLTLHKLDLVMDGDLDEIVDALVLEEQ 350


>gi|189424095|ref|YP_001951272.1| peptide chain release factor 1 [Geobacter lovleyi SZ]
 gi|238692126|sp|B3E628|RF1_GEOLS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189420354|gb|ACD94752.1| peptide chain release factor 1 [Geobacter lovleyi SZ]
          Length = 355

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 117/348 (33%), Positives = 179/348 (51%), Gaps = 9/348 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   +   R   L +   DP +  N  E + L RE   L   I   +  +  L +   
Sbjct: 1   MFDKIQDLEIRFQELESLLSDPTVIANQPEFRKLSREHADLAPLIEAFRRYKKVLDELEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             EL  + +   + +E    L + K       +   L     DS D  LE+ AG GG ES
Sbjct: 61  NQELLADPEMKEMAEEEISRLSQEKERLDAEIKILLLPKDPNDSRDVILEIRAGTGGDES 120

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             ++  L RMY+R+AEK ++K E L   + E  G K     I+G + Y  LK E G HR+
Sbjct: 121 ALFSGDLFRMYSRFAEKNRWKVEMLSCSESERGGYKEVIASIEGQDVYAKLKYESGTHRV 180

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS  ++ +     + ++I+I+ +D +ID YR+SGAGGQHVNTTDSAV
Sbjct: 181 QRVPETEAQGRIHTSACTVAIMA-EAEDVDIDINPADLKIDVYRSSGAGGQHVNTTDSAV 239

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG VV CQ+ERSQ KN+A+A  +L+ ++ +   Q++   A +    K ++G G 
Sbjct: 240 RITHIPTGTVVACQEERSQIKNRAKAMKVLKTRILDTIQQEQN--AKLAADRKQQVGSGD 297

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   + D R  +       ++ GD+++   A  A  +
Sbjct: 298 RSERIRTYNF-PQGRMTDHRIGLTLYRLDSIMAGDIEEITDALRAHYQ 344


>gi|157962943|ref|YP_001502977.1| peptide chain release factor 1 [Shewanella pealeana ATCC 700345]
 gi|189039992|sp|A8H7A5|RF1_SHEPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157847943|gb|ABV88442.1| peptide chain release factor 1 [Shewanella pealeana ATCC 700345]
          Length = 361

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 113/346 (32%), Positives = 182/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     D  +  +    + L +E   L++ +S  K  Q    D     E+
Sbjct: 9   LEGLLERNEEVLALLSDAGVIADQERFRALSKEYSQLEDVVSTFKSFQQAEEDLESAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE---VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D         +            +  Q   L     D N+ ++E+ AGAGG E+  
Sbjct: 69  MEEDDPELKEMAQEEYKVAKSAIAALEDELQILLLPKDPNDDNNCFIEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE ++++ E +  ++GE  G K     I G   YG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAESKRWQIEVMNTNEGEHGGFKEVIAKISGEGVYGKLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P V ++  IEI+++D ++DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRVHTSACTVIVLPEVPEAEAIEINKADLKVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV+CQ +RSQHKN+AQA ++L A++  +E +KR        + +  +  G   
Sbjct: 249 THIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEE--STRRNLVSSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V + R N+      + ++GD+D  ++  +   +
Sbjct: 307 ERIRTYNF-PQGRVSEHRINLTLYRLGEFMEGDIDCVVEPLIQENQ 351


>gi|302339534|ref|YP_003804740.1| peptide chain release factor 1 [Spirochaeta smaragdinae DSM 11293]
 gi|301636719|gb|ADK82146.1| peptide chain release factor 1 [Spirochaeta smaragdinae DSM 11293]
          Length = 355

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 115/342 (33%), Positives = 178/342 (52%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   R + +  +  +P   +++   K L +E   L + +      ++ L       +L
Sbjct: 5   LESIASRFTEIEERLGEPDTMKDMHLYKELSQEHAALKDTVEEFGHYKELLSGIEETKQL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQF----ESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +     L+ +K  +E  +       +     D  +  +E+ AG GG E+ 
Sbjct: 65  LESESDHEMREMAEVELEELKDHLEKSEKRLKTLLVPKDPLDGKNTIIEIRAGTGGDEAS 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R++E++ +K E +E  D E  G K     I G   YG L+ E GVHR+ 
Sbjct: 125 LFAADLYRMYSRFSEQKGWKLEMMESSDTEVGGFKEVIFSISGKEVYGNLRYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  + +    IS  D +ID +R+SG GGQ VNTTDSAVR
Sbjct: 185 RVPSTESQGRIHTSAVTVAVLPEAEKTDID-ISPEDLKIDVFRSSGPGGQSVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTGVVV CQ E+SQ KNKA+A  +LRA+LYE E  K+ +  +     K++IG G  
Sbjct: 244 VTHIPTGVVVTCQDEKSQLKNKAKALRVLRARLYEAEEMKQRKERDQA--RKSQIGSGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   V D R N+       V++G L++ + A 
Sbjct: 302 SERIRTYNF-PQNRVTDHRINLTLYKLDQVMEGALNELIDAL 342


>gi|300726271|ref|ZP_07059724.1| peptide chain release factor 2 [Prevotella bryantii B14]
 gi|299776468|gb|EFI73025.1| peptide chain release factor 2 [Prevotella bryantii B14]
          Length = 376

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 127/357 (35%), Positives = 206/357 (57%), Gaps = 12/357 (3%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
            +   L    + D           +T+ P  W +   A+  M++ + +   +   KE++ 
Sbjct: 12  ERTEALYRYLNIDQKKVEFEEEQLRTQAPDFWDDPKYAQEQMKKVKEIQKWLDGYKEVRQ 71

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              +  +  E     D+    +E  D+  +    +E  + +++L  E DS DA L++++G
Sbjct: 72  YADELQLAFEFYK--DEMVTEEEVDDDYAKAIKAIENLELKNMLRQEEDSMDAVLKINSG 129

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWLKG 183
           AGGTESQDWA+ML+RMY RW E   +  +   + DG+EAGIKS  + I+ G  AYG+LK 
Sbjct: 130 AGGTESQDWASMLMRMYMRWCEAHGYSVKITNMQDGDEAGIKSVEMTIEGGEFAYGFLKS 189

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SPY++  +R TSF+S++V P+VDD+IEI +  +    DT+R+ GAGGQ+V
Sbjct: 190 ENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEIYVDPAKVSWDTFRSGGAGGQNV 249

Query: 244 NTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           N  +S VR+ +            ++++  + R Q KN+A+A  +L+++LY+  L++++  
Sbjct: 250 NKVESGVRLRYQYEDPDTGEHEEILIENTETRDQPKNRAKAMLLLKSQLYDRALKRKQAE 309

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E+ K +I WG QIRSYV    + VKD RTN + +    V+DG LD+F+K+ L 
Sbjct: 310 QAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDGVMDGKLDEFIKSYLM 365


>gi|312869581|ref|ZP_07729732.1| peptide chain release factor 1 [Lactobacillus oris PB013-T2-3]
 gi|311094867|gb|EFQ53160.1| peptide chain release factor 1 [Lactobacillus oris PB013-T2-3]
          Length = 362

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 108/355 (30%), Positives = 180/355 (50%), Gaps = 12/355 (3%)

Query: 9   CLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD--- 64
            +  +FD       R   LN    DP +  +      L +E   L   +    E +    
Sbjct: 2   EISEIFDKLQAVTDRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKQVTQ 61

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHA 123
            + D+  +L    + D  ++ ++     +  + ++E + +   +     D  +  +E+  
Sbjct: 62  TIKDDEEMLRETNDPDLAAMTKDELAESKDRQEQLEKELEVLLIPKDPNDDKNIIMEIRG 121

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
            AGG E+  +A  L  MY  +AEK+ +K E ++ ++ E  G K   L+I G N Y  LK 
Sbjct: 122 AAGGDEASLFAADLYNMYLHYAEKQGWKVEVVDKNETEVGGFKEIALMITGNNVYSKLKF 181

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ R+   +S  R HTS +++ V P   + ++++I   D R+D YR+SGAGGQHV
Sbjct: 182 ENGAHRVQRVPVTESAGRVHTSTATVGVMP-EAEDVDVDIDPKDIRVDVYRSSGAGGQHV 240

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L++++Y+   QK  E +   E  K
Sbjct: 241 NKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYYQQK--EQSAYDEQRK 298

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             IG G    +IR+Y   P   V D R  +       ++ G+LD+ ++A +   +
Sbjct: 299 NAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGELDEIIEALIVADQ 352


>gi|294341235|emb|CAZ89636.1| Peptide chain release factor 1 (RF-1) [Thiomonas sp. 3As]
          Length = 358

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 123/344 (35%), Positives = 187/344 (54%), Gaps = 8/344 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            L D  +   +R   L+     P    ++   + + RE   L   +    + + +  D  
Sbjct: 4   SLLDKLEQMQRRADELDALLAAPDCTADLQRFRNMTRELAELQAVVGLYVQYKTKTEDLS 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTE 129
               L  + D   + Q+   + +     +E + Q   L     DS + ++E+ AG GG E
Sbjct: 64  QAESLLSDPDMKELAQQEIQDARAALDALEARLQVALLPRDPDDSRNVFVEIRAGTGGEE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           S  +A  LLRMY R+AE++++ TE +     +  G K   L + G  AYG LK E G HR
Sbjct: 124 SALFAADLLRMYARYAERKRWTTEVISESPSDLGGYKEVILRVAGEGAYGLLKYESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R HTS +++ V P VD++  I+I+ SD RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPKTETQGRIHTSAATVAVMPEVDEAQAIQINPSDLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +RITH+PTG+VV+CQ ERSQH+NKA+A ++L A+L E E Q R+       + K+ +G G
Sbjct: 244 IRITHLPTGLVVECQDERSQHRNKARALSVLAARLAERERQARQAE--EAATRKSLVGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
               +IR+Y   P   V + R N+       +LDGDLD+ + A 
Sbjct: 302 DRSDRIRTYNF-PQGRVSEHRINLTLYKIDAILDGDLDELLTAL 344


>gi|282878031|ref|ZP_06286839.1| putative peptide chain release factor 2 [Prevotella buccalis ATCC
           35310]
 gi|281299866|gb|EFA92227.1| putative peptide chain release factor 2 [Prevotella buccalis ATCC
           35310]
          Length = 374

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 126/357 (35%), Positives = 206/357 (57%), Gaps = 12/357 (3%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
            +   L    + D           +T+ P  W++   A+  M + + ++  +   ++++ 
Sbjct: 12  ERAEALHRYLNIDQKKVEFEEEQLRTQAPDFWEDPKRAQEQMIKVKGIEKWLVGYQQVRQ 71

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
              +  +  +     D+     E   +  +    +E+ + +++L    D  D  +++++G
Sbjct: 72  LADELELAFDFY--RDEMITEDELDADYAKAVAAIEHLEMKNMLRQTEDPMDCVMKINSG 129

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PNAYGWLKG 183
           AGGTESQDWA ML+RMY RWAE   +K    +I DG+EAGIKS T+ I+G   AYG+LK 
Sbjct: 130 AGGTESQDWAQMLMRMYMRWAEAHDYKCTISDIQDGDEAGIKSVTMKIEGGEYAYGYLKS 189

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR+SP+++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ+V
Sbjct: 190 ENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDTIEVFVDPARVSWDTFRSSGAGGQNV 249

Query: 244 NTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           N  +S VR+ +            ++++  + R Q KN+A+A  +L+++LY+  ++KR E 
Sbjct: 250 NKVESGVRLRYQYEDPDTGEEEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRLEA 309

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E+ K +I WG QIRSYV    + VKD RTN + T    V+DG LD+F+KA L 
Sbjct: 310 QAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTTDVDAVMDGKLDEFIKAYLM 365


>gi|288942095|ref|YP_003444335.1| peptide chain release factor 1 [Allochromatium vinosum DSM 180]
 gi|288897467|gb|ADC63303.1| peptide chain release factor 1 [Allochromatium vinosum DSM 180]
          Length = 359

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 117/342 (34%), Positives = 180/342 (52%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     +P    +    + L RE   L   +   +  +D   D     EL
Sbjct: 9   LERIAERFGEVMALLAEPETQSDQGRFRDLSREYAQLQPLMECYERYRDAERDLAAAEEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGAGGTESQDW 133
             + +  + L        R +L+V   + ++  +     D  +A+LE+ AG GG E+  +
Sbjct: 69  LTDPE-MAALARDEIEAARERLDVLEPELQTLLIPPDPNDQCNAFLEIRAGTGGAEAALF 127

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L+RMY R+AE   ++TE +   +GE  G K   + + G   Y  LK E G HR+ R+
Sbjct: 128 AGDLMRMYMRYAELLGWRTEQVSASEGELGGYKEVVIRVSGSGVYSRLKFEPGAHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS  ++ V P  +    IEI+ +D RIDTYR+SGAGGQHVN TDSA+RIT
Sbjct: 188 PETESQGRIHTSACTVAVLPEAESIDAIEINSNDLRIDTYRSSGAGGQHVNKTDSAIRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+P+G+VV+CQ+ERSQHKN+A+A ++L AKL     + +   +   ES K ++G G    
Sbjct: 248 HLPSGIVVECQEERSQHKNRAKAMSLLHAKLLAGARETQ--ASEQSESRKLQVGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +IR+Y   P   + D R N+      +V+ G LD  ++  LA
Sbjct: 306 RIRTYNF-PQNRLTDHRINLTLYKLDEVMTGQLDQVIEPLLA 346


>gi|315649892|ref|ZP_07902974.1| peptide chain release factor 1 [Paenibacillus vortex V453]
 gi|315274691|gb|EFU38073.1| peptide chain release factor 1 [Paenibacillus vortex V453]
          Length = 355

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 106/351 (30%), Positives = 181/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D   +   R   L+    DP +  +  + +   +E+  L  A     E ++ + +   
Sbjct: 1   MLDRLQSLADRYEKLSELLCDPDVANDSKKLRDYSKEQSDLQPAYEAYVEYKNVIEELEA 60

Query: 72  LLELALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +  E+ D  + +     ++    R +   E  +   L     D  +  +E+   AGG
Sbjct: 61  AKTMQGEKMDDEMREMVKMEIEELSTRERELAEKIRILLLPKDPNDDKNVIIEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A+ L RMYTR+A+ + +K E ++++  +  G K    +I G  AY  +K E G 
Sbjct: 121 DEAALFASDLYRMYTRYADTQGWKVELMDVNTNDLGGFKEVIFMINGRGAYSKMKFESGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS S++ V P   + ++IEI + D R+DT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRIPTTESGGRIHTSTSTVAVMP-EAEEVDIEIHDKDIRVDTFCSSGAGGQSVNTTK 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V  CQ  +SQ+ NK +A  +LRA+++++  Q  EE A      K+++G
Sbjct: 240 SAVRVTHIPTGIVATCQDGKSQNSNKDKALQVLRARIFDMMRQ--EEEAKYAGERKSKVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       V++G++++ + A    ++
Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTVHKLDQVMNGEIEEIVSALTIAEQ 347


>gi|297588765|ref|ZP_06947408.1| peptide chain release factor RF1 [Finegoldia magna ATCC 53516]
 gi|297574138|gb|EFH92859.1| peptide chain release factor RF1 [Finegoldia magna ATCC 53516]
          Length = 355

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 116/351 (33%), Positives = 195/351 (55%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  D+ V +   L  K  DP +  ++     LM+E   L+  ++     +D L +   
Sbjct: 1   MFENLDSVVDKFKDLEVKVADPEVIADMENWTKLMKEHADLEPVVNKYLSYKDNLKNLEE 60

Query: 72  LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             E+     D  + +   D      ++I+ + E  +   L     D  + ++E+ AGAGG
Sbjct: 61  DKEMLGTTGDSEMEELLKDEISTLEEQIEKDQEDLKILLLPKDPNDEKNVFIEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  LLRMY  +++K+++ TE ++I      GIK   +++KG  AY  LK E GV
Sbjct: 121 DEAGLFAGELLRMYQMYSDKKRWTTEIMDIQQQGVGGIKEVVMMVKGKGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS +++ V P   + ++++I + D RID +RASG GGQ VNTTD
Sbjct: 181 HRVQRVPQTESSGRIHTSTATVAVLP-EAEDVDVKIEQKDLRIDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG+VV CQ E+SQ KNK +A  +L+++LY+L  +++    +  ++ K+++G
Sbjct: 240 SAVRITHIPTGLVVTCQDEKSQIKNKDKAMKVLKSRLYDLMEEEKN--KDRADARKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   + D R N       + LDGD+++ +    +  +
Sbjct: 298 TGDRSERIRTYNF-PQGRITDHRINKTIFQLQNFLDGDIEEMIDDLTSYDQ 347


>gi|227824241|ref|ZP_03989073.1| peptide chain release factor [Acidaminococcus sp. D21]
 gi|226904740|gb|EEH90658.1| peptide chain release factor [Acidaminococcus sp. D21]
          Length = 359

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 110/355 (30%), Positives = 185/355 (52%), Gaps = 16/355 (4%)

Query: 13  LFD----WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK---EIQDR 65
           +F+          R   L  K  DP +  +  + +   +    L + +   +   ++Q  
Sbjct: 1   MFEHLDKLQALEDRYIDLEAKISDPSVISDQAQWQKYTKAHAKLTDVVETYRAYQKLQKT 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF--ESLLSGEADSNDAYLEVHA 123
             D+  LLE+   +++ + + E        +LE   K+     L     D  +  +E+ A
Sbjct: 61  YDDDQALLEMGESDEELAAMAEMEMKELAPQLEDYEKRLTILLLPKDPNDEKNIIMEIRA 120

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGG E+  +A  L RMYTR+AE + ++ E ++       G K    ++ G + Y  +K 
Sbjct: 121 GAGGDEAALFAGDLFRMYTRYAETKGWRVELMDSSPTGLGGFKEVIFMVSGSDVYSHMKF 180

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHR+ R+   ++  R HTS +++ V P   + ++++I  SD RIDTYRA GAGGQ+V
Sbjct: 181 ESGVHRVQRVPETEAQGRIHTSTATVAVMP-EAEEVDVDIKMSDIRIDTYRAGGAGGQYV 239

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVR+THIPTG+V QCQ E+SQ KN+ +   +LR+++YE       + A      +
Sbjct: 240 NKTESAVRMTHIPTGIVAQCQDEKSQAKNREKCLRVLRSRIYEAAQ--EAQRAAEESERR 297

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +++G G    +IR+Y   P   V D R  +     +DV++GDLD+ + A +  ++
Sbjct: 298 SQVGTGDRSERIRTYNF-PQGRVTDHRIGLTLHKLTDVMNGDLDELLGALMTEEQ 351


>gi|169824785|ref|YP_001692396.1| peptide chain release factor 1 [Finegoldia magna ATCC 29328]
 gi|303235021|ref|ZP_07321645.1| peptide chain release factor 1 [Finegoldia magna BVS033A4]
 gi|238687758|sp|B0S2B6|RF1_FINM2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|167831590|dbj|BAG08506.1| bacterial peptide chain release factor 1 [Finegoldia magna ATCC
           29328]
 gi|302493876|gb|EFL53658.1| peptide chain release factor 1 [Finegoldia magna BVS033A4]
          Length = 355

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 117/351 (33%), Positives = 194/351 (55%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  D+ V +   L  K  DP +  ++     LM+E   L+  ++     +D L +   
Sbjct: 1   MFENLDSVVDKFKDLEVKVADPEVIADMENWTKLMKEHADLEPVVNKYLSYKDNLKNLEE 60

Query: 72  LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             EL     D  + +   D      ++I+ + E  +   L     D  + ++E+ AGAGG
Sbjct: 61  DKELLGTTGDSEMEELLKDEISTLEEQIEKDQEELKILLLPKDPNDEKNVFIEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  LLRMY  +++K+ + TE ++I      GIK   +++KG  AY  LK E GV
Sbjct: 121 DEAGLFAGELLRMYQMYSDKKHWTTEIMDIQQQGVGGIKEVVMMVKGKGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS +++ V P   + ++++I + D RID +RASG GGQ VNTTD
Sbjct: 181 HRVQRVPQTESSGRIHTSTATVAVLP-EAEDVDVKIEQKDLRIDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG+VV CQ E+SQ KNK +A  +L+++LY+L  +++    +  ++ K+++G
Sbjct: 240 SAVRITHIPTGLVVTCQDEKSQIKNKDKAMKVLKSRLYDLMEEEKN--KDRADARKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   + D R N       + LDGD+++ +    +  +
Sbjct: 298 TGDRSERIRTYNF-PQGRITDHRINKTIFQLQNFLDGDIEEMIDDLTSYDQ 347


>gi|157694096|ref|YP_001488558.1| peptide chain release factor 1 [Bacillus pumilus SAFR-032]
 gi|166977360|sp|A8FID1|RF1_BACP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157682854|gb|ABV63998.1| peptide chain release factor RF1 [Bacillus pumilus SAFR-032]
          Length = 355

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 107/351 (30%), Positives = 176/351 (50%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D   +  +R   LN    DP +  +  + +   +E+  +   +   ++ +        
Sbjct: 1   MLDRLKSIEERYEKLNEYLSDPEVVNDPTKLREYSKEQSDIQETVEVYRQYRAAYDQLSE 60

Query: 72  LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +  ++ D  +     +      +  +   +  +   +     D+ +  +EV   AGG
Sbjct: 61  AKAMLEDKLDAEMRDMVKEEISELTEETERLEDELKILLIPKDPNDNKNVIVEVRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE +E       G K    +I G  AY  LK E G 
Sbjct: 121 EEAALFAGNLYRMYSRYAEMQGWKTEVMEASVTGTGGYKEIIFMISGKGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EAEEVEIDIHEKDIRVDTFTSSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    +RE  A   ++ K+ +G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKF--QREAQAEYDQTRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+G LD+ + A +   +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVIDALIMEDQ 347


>gi|147679165|ref|YP_001213380.1| protein chain release factor A [Pelotomaculum thermopropionicum SI]
 gi|189039982|sp|A5CYC3|RF1_PELTS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|146275262|dbj|BAF61011.1| protein chain release factor A [Pelotomaculum thermopropionicum SI]
          Length = 349

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 109/343 (31%), Positives = 179/343 (52%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+  ++   L     +P +  ++   +  ++    L + ++  ++ +  + +    + L
Sbjct: 5   LDSIEKKYEELENLIGNPEIIADIARWQEYVKAHAELADIVAVYRDYKKVVKEIQDTIAL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  + +     L  +  + +  +       L     D  +  LE+ AG GG E+ 
Sbjct: 65  MKEEPDEDLREMAQAELDELTEKKDNLENRLKMLLLPKDPNDEKNVILEIRAGTGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE++ ++TE L+ +  +  G K    LI+G   Y  +K E GVHR+ 
Sbjct: 125 LFAADLFRMYSRYAERQGWRTEILDANYTDIGGFKEVISLIEGKGVYSRMKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + ++++I   D RID + +SG GGQ VNTT SAVR
Sbjct: 185 RIPTTESGGRIHTSAATVAVLP-EAEEVDVQIDPDDLRIDVFCSSGHGGQSVNTTQSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV  Q E+SQHKNK +A  +LRA+L +   Q+ ++   I  + K+ +G G  
Sbjct: 244 ITHIPTGIVVSMQDEKSQHKNKEKAMKVLRARLLDRVQQEHQQ--KIASTRKSMVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R  +       VLDGDLD+ +   +
Sbjct: 302 SERIRTYNF-PQNRVTDHRVGLTLHRLDSVLDGDLDEIIDTLI 343


>gi|159898428|ref|YP_001544675.1| peptide chain release factor 2 [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159891467|gb|ABX04547.1| peptide chain release factor 2 [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 337

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 144/333 (43%), Positives = 205/333 (61%), Gaps = 6/333 (1%)

Query: 25  FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI 84
            L  +  +P LW N  +A+ +++    +   +     +   L     LL+L    DD   
Sbjct: 3   DLEHQAAEPSLWDNPQQAQSILQRLARMQEELKMWDSLAVDLATLRDLLQL--SADDADS 60

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           L +    +  +   V+  +   LL  + DS +A++ + +GAGG ESQDWA MLLRMY+RW
Sbjct: 61  LSQIEREVNGLTKSVDQLELSILLGEKYDSTNAFISIQSGAGGVESQDWAQMLLRMYSRW 120

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
            E + F+T  +++ DGEEAGIKSATL ++GP AYG+ K E G+HRLVR+SP+D+N RRHT
Sbjct: 121 GESQGFRTTIVDMMDGEEAGIKSATLELRGPYAYGYAKAEAGIHRLVRLSPFDANHRRHT 180

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI---PTGVVV 261
           SF+ + V P VDD+ E++I+  D R+D YRA G GGQ VNTTDSAVR+ +    P  ++V
Sbjct: 181 SFARVEVLPEVDDAAEVKINPEDLRVDVYRAGGHGGQGVNTTDSAVRLVYRGGTPDEIIV 240

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
            CQ ERSQ +NK  A N+LRA+L E EL ++       +    +  WG QIRSYVL   +
Sbjct: 241 TCQNERSQLQNKETAMNVLRARLLERELARQVAERAKLKGEHRDAAWGNQIRSYVLDD-R 299

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            VKD RTN+E ++   VLDG++D F+ A L  +
Sbjct: 300 RVKDHRTNVETSNTQAVLDGEIDLFIDAFLRWR 332


>gi|238796545|ref|ZP_04640052.1| Peptide chain release factor 2 [Yersinia mollaretii ATCC 43969]
 gi|238719523|gb|EEQ11332.1| Peptide chain release factor 2 [Yersinia mollaretii ATCC 43969]
          Length = 303

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 167/301 (55%), Positives = 213/301 (70%), Gaps = 1/301 (0%)

Query: 53  DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112
           +  ++ I ++   + D   LLELA+E DD     E    L  +  ++   +F  + SGE 
Sbjct: 2   EEIVTTIDQLDQGMEDVTGLLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGEY 61

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DS + YL++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  DG+ AG+KSAT+ I
Sbjct: 62  DSANCYLDLQAGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESDGDVAGLKSATIKI 121

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID 
Sbjct: 122 IGEYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDV 181

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+
Sbjct: 182 YRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKK 241

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                + E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 242 NADKQVLEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLK 300

Query: 353 I 353
            
Sbjct: 301 A 301


>gi|222637229|gb|EEE67361.1| hypothetical protein OsJ_24645 [Oryza sativa Japonica Group]
          Length = 498

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 130/358 (36%), Positives = 214/358 (59%), Gaps = 4/358 (1%)

Query: 1   MKLS-RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
           ++L+  +++ +      D   + ++ L  K+ D  LW +  +A+ ++     + + +  +
Sbjct: 130 VELAVARVSEVRQSAGLDQLEEEIASLEKKSADSSLWDDPSKAQEILVALTEVKDRVKLL 189

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSGEADSNDA 117
            +++ ++ +   +++L  E D          +         ++  +   LLSG  D   A
Sbjct: 190 NDLKLQVEEAETIVKLTEELDSIDTGLLEEASKIIKALNKALDNFEMTQLLSGPYDKEGA 249

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            + + AGAGGT++QDWA+MLLRMY RW EK+++KT  +E   GEEAGIKSAT+ ++G  A
Sbjct: 250 VINITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSATIELEGRYA 309

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRAS 236
           YG+L GE+G HR+VR SP+++   R TSF+ + V P+  ++S+++EI E D  I   RA 
Sbjct: 310 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESMDVEIPEEDLEISFTRAG 369

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ+VN  ++AVR+ HIPTG+ V+C +ERSQ  NK +A + L+AKL  +  ++R    
Sbjct: 370 GKGGQNVNKVETAVRMVHIPTGIAVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEI 429

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                   +  WG+QIR+YV  PY++VKD+RT  E +  + V+DG+LD F++A L  K
Sbjct: 430 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTACETSDITGVMDGELDTFIRAYLKYK 487


>gi|89898648|ref|YP_515758.1| peptide chain release factor 2 [Chlamydophila felis Fe/C-56]
 gi|89332020|dbj|BAE81613.1| hypothetical protein [Chlamydophila felis Fe/C-56]
          Length = 315

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 146/308 (47%), Positives = 199/308 (64%), Gaps = 1/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
                 L   +S  +  + ++ +    L  +    D    ++        +  +   + +
Sbjct: 2   SERIASLKRQVSDYQNFKSKVDNLTFFLNDSEASSDPEFREDLEKEFSICENILSEWEIQ 61

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGE D N  +L ++AGAGGTES DW  ML RMY RWA + ++K E ++  DG+ AGI
Sbjct: 62  RLLSGEVDKNSCFLTINAGAGGTESCDWVEMLFRMYCRWASEHRWKVEVIDRQDGDVAGI 121

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K  T+   G  AYG+ K E+GVHRLVRISP++SN++RHTSF+S+ VYP +DD IEI+I  
Sbjct: 122 KHVTVKFSGDYAYGYAKAERGVHRLVRISPFNSNAKRHTSFASVDVYPEIDDEIEIDIQP 181

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDT+R+SGAGGQHVN TDSAVRITHIPTG+ V CQ ERSQ +N+     MLRA++Y
Sbjct: 182 NDLRIDTFRSSGAGGQHVNVTDSAVRITHIPTGITVSCQNERSQLQNRESCMKMLRARMY 241

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LD 344
           +  LQ+R E   +   +K EI WG QIR+YV QPY +VKD+RT  E  +   ++DG+ LD
Sbjct: 242 QQILQERLEKQLLERKNKKEIAWGSQIRNYVFQPYTLVKDVRTGYETGNVQAMMDGELLD 301

Query: 345 DFMKATLA 352
           DF+KA LA
Sbjct: 302 DFVKAYLA 309


>gi|217969845|ref|YP_002355079.1| peptide chain release factor 1 [Thauera sp. MZ1T]
 gi|217507172|gb|ACK54183.1| peptide chain release factor 1 [Thauera sp. MZ1T]
          Length = 360

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 117/339 (34%), Positives = 182/339 (53%), Gaps = 7/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   RL  L+         +++   + L RER  ++  ++  +E +    D     EL
Sbjct: 9   LEHLANRLEELDRTLASEEGARDMNAFRELSRERAEIEPVVALYREHRLAEADCATAREL 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +        RI+      Q   L     D+ + +LE+ AG GG E+  +A
Sbjct: 69  LADPEMRELGELELAEGEARIEALEAELQRALLPRDPNDARNLFLEIRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE++++K E +   + +  G K     + G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYTRYAERQRWKVEIVSASESDLGGYKEVIARVVGNGAYSKLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+   ++I+ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 VTETQGRIHTSACTVAVLPEADEVEAVDINPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ +RSQH+NKAQA  +L A+LY+  +  R + +      K+ +G G    +
Sbjct: 249 IPTGIVVECQDDRSQHRNKAQAMAVLAARLYDARV--RAQQSAEAAQRKSLVGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   V D R N+       V+ G+LD+ + A 
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKLDAVMQGELDEIVDAL 344


>gi|149280703|ref|ZP_01886814.1| peptide chain release factor 1 [Pedobacter sp. BAL39]
 gi|149228568|gb|EDM33976.1| peptide chain release factor 1 [Pedobacter sp. BAL39]
          Length = 380

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 104/348 (29%), Positives = 178/348 (51%), Gaps = 12/348 (3%)

Query: 11  GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
             + +  +    R   +  +  +P   Q++     L +E + L   +   K  ++ + + 
Sbjct: 22  KDMLEKLEAIKLRWEDVEEQLSNPDTMQDMKRFAALNKEYKDLGKIVDEYKIYKNVMSNI 81

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGA 125
               E+   E D  + +   + L  +  + E  +       +     D+ +A  E+  G 
Sbjct: 82  EANKEILSNEKDAELREMAKEELDLLLKQQEEMEEKVRLMLIPVDPEDAKNAVFEIRGGT 141

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  L RMY+R+ E++ +K E +++ +G   G K   L + G + YG LK E 
Sbjct: 142 GGDEAALFAGDLYRMYSRFFEQKGWKVETVDVTEGTAGGYKEVILKVSGEDVYGQLKYES 201

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   ++  R HTS +S+ V P   + I++ I+ +D  + T R+ GAGGQ+VN 
Sbjct: 202 GVHRVQRVPDTETQGRVHTSAASVAVLP-EAEEIDLYINPADIDLQTSRSGGAGGQNVNK 260

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
            ++ V++TH P+G+VV CQQERSQ  N+  A  MLR+KLY++ELQK+    +I    KT 
Sbjct: 261 VETKVQLTHRPSGIVVVCQQERSQLGNRVIAMEMLRSKLYDIELQKKN--GDIAARRKTM 318

Query: 306 IGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +  G +   IR+Y   P   V D R  +   + S V+DG + + + A 
Sbjct: 319 VSTGDRSAKIRTYNY-PQGRVTDHRIGLTLYNLSGVMDGGVQELIDAL 365


>gi|212703639|ref|ZP_03311767.1| hypothetical protein DESPIG_01684 [Desulfovibrio piger ATCC 29098]
 gi|212672934|gb|EEB33417.1| hypothetical protein DESPIG_01684 [Desulfovibrio piger ATCC 29098]
          Length = 356

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 108/350 (30%), Positives = 172/350 (49%), Gaps = 11/350 (3%)

Query: 13  LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68
           +F   +   ++   L      P ++ +  + + L +    L + +   +    +   L +
Sbjct: 1   MFAKLEGLEKKYMELEQALAQPDVYNDQDQYRKLTKAHADLRDVVELFRRHRSLTQELEE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           N  LL  +  +      +E +     +       +   L     D  +  LE+ AG GG 
Sbjct: 61  NKQLLHDSDPDIKAMAQEEIAAAEAELPELEHKIKVLLLPKDPLDEKNTILEIRAGTGGE 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMYTR+AE + +K E +     +  G K    LI G   Y  LK E G H
Sbjct: 121 EAALFAADLFRMYTRYAEIKGWKVEIMSESPSDSGGYKEIICLISGDRVYSHLKFEAGTH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS +++ V P   + +++EI   D RID YRASGAGGQHVN T+S
Sbjct: 181 RVQRVPATETQGRIHTSAATVAVMP-EAEEVDVEIRPEDLRIDIYRASGAGGQHVNKTES 239

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITHIPTG VV CQ ERSQHKNKA+A  +L +++   E +++     +    K ++G 
Sbjct: 240 AVRITHIPTGTVVTCQDERSQHKNKARAMKVLASRILAAERERQNSE--LSADRKAQVGS 297

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G    +IR+Y   P     D R N+   S   +++G+++   +A     +
Sbjct: 298 GDRSERIRTYNF-PQGRCTDHRINLTLYSLDRIMEGEVEPLFEALATAAQ 346


>gi|325847800|ref|ZP_08170022.1| peptide chain release factor 1 [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325480818|gb|EGC83871.1| peptide chain release factor 1 [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 357

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 120/348 (34%), Positives = 189/348 (54%), Gaps = 11/348 (3%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           + ++  +    L  K  DP +  +  + K + RE   L   +    EI+          E
Sbjct: 4   NLEHMRENFKELEKKLADPEVLSDTDKFKKVSREYNQLKPIVEKYNEIRAAEDMIEENTE 63

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTES 130
           L  E +D  ++      +   K  +E      +   +     D  D  +E+ AGAGG E+
Sbjct: 64  LLKEAEDKEMIDLLKAEIDENKKNLEKYNEDLKILLIPQDPNDHKDVIVEIRAGAGGEEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY  +A+K+ +KTE +++      G+K AT +++G  AY  LK E GVHR+
Sbjct: 124 GLFAGNLYRMYHMYADKQNYKTEDIDVSSQGIGGMKEATFIVRGEGAYSKLKYESGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D ++I+I  +D R D YR+SG GGQ VNTTDSAV
Sbjct: 184 QRVPETESGGRIHTSTATVAVLP-EADEVDIKIDPNDIRTDVYRSSGNGGQSVNTTDSAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+THIPTG+VV CQ E+SQ KNK +A  +LRA+LYE+E +KR++   I ++ K+++G G 
Sbjct: 243 RLTHIPTGLVVTCQDEKSQIKNKDKAMRVLRARLYEMEEEKRQKE--ISDNRKSQVGTGD 300

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   + D R N       D LDG++++ + + +   +
Sbjct: 301 RSERIRTYNY-PQGRITDHRINKTIYQLDDFLDGNIEEMIDSLITEDQ 347


>gi|227529623|ref|ZP_03959672.1| peptide chain release factor 1 [Lactobacillus vaginalis ATCC 49540]
 gi|227350413|gb|EEJ40704.1| peptide chain release factor 1 [Lactobacillus vaginalis ATCC 49540]
          Length = 362

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 106/355 (29%), Positives = 174/355 (49%), Gaps = 12/355 (3%)

Query: 9   CLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---D 64
            +  +FD       R   LN    DP +  +      L +E   L   +    E +    
Sbjct: 2   EMAEIFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKKVTQ 61

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHA 123
            + D+  LL  + + D   + ++   + +  +    +  +   +     D  +  +E+  
Sbjct: 62  TISDDEELLRESDDPDLTELTKDELSSAKDQQAKLEKELEILLIPKDPNDDKNIIMEIRG 121

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
            AGG E+  +A  L  MY  +AE + +K E ++  + E  G K   L+I G   Y  LK 
Sbjct: 122 AAGGDEASLFAADLYNMYLHYAENQGWKVEVVDKSETEVGGFKEIALMITGDKVYSKLKF 181

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ R+   +S  R HTS +++ V P   + ++++I   D R+D YR+SGAGGQHV
Sbjct: 182 ENGAHRVQRVPVTESAGRVHTSTATVGVMP-EAEDVDVDIDPKDIRVDVYRSSGAGGQHV 240

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L++++Y+   QK  E +      K
Sbjct: 241 NKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYYQQK--EQSAYDAKRK 298

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             IG G    +IR+Y   P   V D R  +       ++ GDLD+ ++A +   +
Sbjct: 299 DAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMSGDLDEIIEALIVADQ 352


>gi|52082235|ref|YP_081026.1| peptide chain release factor 1 [Bacillus licheniformis ATCC 14580]
 gi|52787627|ref|YP_093456.1| peptide chain release factor 1 [Bacillus licheniformis ATCC 14580]
 gi|319648109|ref|ZP_08002326.1| peptide chain release factor 1 [Bacillus sp. BT1B_CT2]
 gi|81608865|sp|Q65DV1|RF1_BACLD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|52005446|gb|AAU25388.1| peptide chain release factor 1 [Bacillus licheniformis ATCC 14580]
 gi|52350129|gb|AAU42763.1| PrfA [Bacillus licheniformis ATCC 14580]
 gi|317389744|gb|EFV70554.1| peptide chain release factor 1 [Bacillus sp. BT1B_CT2]
          Length = 356

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 112/351 (31%), Positives = 181/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           + D   +   R   LN    DP +  +  + +   +E+  L   +   +  +    +L D
Sbjct: 1   MLDRLKSIEDRYEKLNELLSDPEVVNDPKKLREYSKEQSDLQETVEVYRRYRSASEQLSD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127
              +LE  L+ D   +++E    LQ     +  + +   +     D  +  +E+   AGG
Sbjct: 61  AKAMLEEKLDSDMREMVKEEISELQEEIESLTDQLKVLLIPKDPNDDKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE +E +     G K    +I G  AY  LK E G 
Sbjct: 121 EEAALFAGNLYRMYSRYAELQGWKTEVMEANMTGTGGYKEIIFMINGNGAYSRLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P   + +E++I E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLP-EAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K+ +G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKF--QQEAQAEYDQNRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+G LD+ + A +   +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVIDALIVEDQ 347


>gi|238026092|ref|YP_002910323.1| peptide chain release factor 1 [Burkholderia glumae BGR1]
 gi|237875286|gb|ACR27619.1| Peptide chain release factor 1 [Burkholderia glumae BGR1]
          Length = 360

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 178/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN      ++  ++ + + L RE   +   +    + +    D     EL
Sbjct: 9   LDQLSSRLAELNELLSRENVTADLDQYRKLTREHAEIGPVVEQYAQWRLARGDEAAAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +       +E     +          Q   L     D  + ++E+ AG GG ES  +A
Sbjct: 69  LADASMREFAEEEIREARERMARLEAELQTMLLPKDPNDDRNIFVEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYLRYAERQRWQVEMMSESGSDLGGYKEVIVRIAGHGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIAEVEINPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQHKNK +A  +L A++ +   Q  E+ A    + K+ IG G    +
Sbjct: 249 LPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAREAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++DGDLD+ + +  +  +
Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYRLEAIMDGDLDELIASLASEHQ 349


>gi|212640540|ref|YP_002317060.1| peptide chain release factor 1 [Anoxybacillus flavithermus WK1]
 gi|212562020|gb|ACJ35075.1| Protein chain release factor A [Anoxybacillus flavithermus WK1]
          Length = 361

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 110/354 (31%), Positives = 175/354 (49%), Gaps = 12/354 (3%)

Query: 10  LGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           +  +FD  +    R   LN    DP +  +  + +   +E+  L   +   +E +     
Sbjct: 1   MRKMFDRLEAVEARYEKLNELLMDPEVLNDPKKLRDYSKEQSDLAETVQTYREYKSVREQ 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAG 124
                 +  E+ D  +     + +  ++   E      +   L     D  +  +E+   
Sbjct: 61  LADAKAMLEEKLDPDMRDMVKEEISELEEREEQLVEKLKVLLLPKDPNDDKNVIMEIRGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L RMYTR+AE + +KTE +E H     G K    +I+G  AY  LK E
Sbjct: 121 AGGEEAALFAGDLYRMYTRYAESQGWKTEVIEAHPTGLGGYKEIIFMIQGKGAYSKLKFE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS +++   P +++      +E D R+DT+ +SG GGQ VN
Sbjct: 181 NGAHRVQRVPETESGGRIHTSTATVACLPEMEEIEIEI-NEKDIRVDTFASSGPGGQSVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TT SAVR+THIPTG+VV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K 
Sbjct: 240 TTMSAVRLTHIPTGIVVSCQDEKSQIKNKEKAMKVLRARIYDKY--QQEARAEYDQTRKQ 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +G G    +IR+Y   P   V D R  +       VL+G LD+ + A +   +
Sbjct: 298 AVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQVLEGKLDEIIDALILDDQ 350


>gi|84393962|ref|ZP_00992702.1| peptide chain release factor 2 [Vibrio splendidus 12B01]
 gi|84375406|gb|EAP92313.1| peptide chain release factor 2 [Vibrio splendidus 12B01]
          Length = 303

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 161/300 (53%), Positives = 217/300 (72%), Gaps = 1/300 (0%)

Query: 53  DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112
           +  +  I ++   + D   LLELA+EE+D     E    L  ++ ++E  +F  + +G+ 
Sbjct: 2   EAVVETIDQLDQGVEDVEGLLELAVEEEDQETFDEIEPELAELEAKLEKLEFRRMFAGDH 61

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D++D Y+++ +G+GGTE+QDW +M+LRMY RWA+ + FKTE +E+ DG+ AG+K AT+ I
Sbjct: 62  DASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWADSKGFKTEVIEVSDGDVAGLKGATVRI 121

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I I+I+ SD RID 
Sbjct: 122 SGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNITIDINPSDLRIDV 181

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELE+QK+
Sbjct: 182 YRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELEIQKQ 241

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                  E +K++IGWG QIRSYVL     +KDLRT IE  +   VLDGDLD F++A+L 
Sbjct: 242 NAEKQASEETKSDIGWGSQIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDKFIEASLK 300


>gi|332993699|gb|AEF03754.1| peptide chain release factor 1 [Alteromonas sp. SN2]
          Length = 361

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 119/339 (35%), Positives = 181/339 (53%), Gaps = 9/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N V+R   +     DP +  N  + + L +E   L++ +      Q    +     E+
Sbjct: 9   LENLVERFEEVQALLGDPQVIGNQDKFRNLSKEFSQLESVVGGFNAYQQAQENLDSANEM 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D         +       I+      Q   L     D ++ +LEV AGAGG E+  
Sbjct: 69  LKEDDAEMREMAQEELKIAKADIERLETELQVLLLPKDPNDDSNCFLEVRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE + ++ E +  ++GE  G K     I G   YG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAETKGWRVELINANEGEHGGYKEVVANISGDGVYGILKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P + +S  I+I+ +D RIDT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPDTESQGRIHTSACTVAVLPEIPESEAIDINPADLRIDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+P+G+VV+CQ ERSQHKN+A+A ++L+A+L  +E    +  A    + K+ +G G   
Sbjct: 249 THLPSGLVVECQDERSQHKNRAKAMSVLQARLNNIEE--EKRAAEEASTRKSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +IR+Y   P   V D R N+      +V++GDL   + 
Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTIYRLDEVIEGDLKQLLD 344


>gi|282859886|ref|ZP_06268974.1| peptide chain release factor 2-like protein [Prevotella bivia
           JCVIHMP010]
 gi|282587289|gb|EFB92506.1| peptide chain release factor 2-like protein [Prevotella bivia
           JCVIHMP010]
          Length = 374

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 118/359 (32%), Positives = 206/359 (57%), Gaps = 12/359 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  + + L      +           +T+ P  W++   A+  M++ + ++  +    + 
Sbjct: 10  ILSRTDALYHYLGIEQKRIEFEEEQLRTQAPDFWEDPDRAREQMKKVKEIERWVKGYDKA 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + +  +  +  +     D+    +E      ++   +E  + +++L  + D  +  ++++
Sbjct: 70  RAQAEELQLAFDFYK--DELVTEEEVDAIYNKVVATIEDLELKNMLRQQEDPMECVMKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PNAYGWL 181
           +GAGGTESQDWA+ML+RMY RW E   +K    +I  G+EAGIKS T+  +G   A+G+L
Sbjct: 128 SGAGGTESQDWADMLMRMYMRWGEAHGYKVTISDIQVGDEAGIKSVTMKFEGGEYAFGYL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SP+++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ
Sbjct: 188 KSENGVHRLVRVSPFNAQGKRMTSFASVFVTPLVDDTIEVYVDPARVSWDTFRSSGAGGQ 247

Query: 242 HVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  +S VR+ +            ++++  + R Q KN+A+A  +L+++LY+  ++KR 
Sbjct: 248 NVNKVESGVRLRYQYEDPDTGEQEEILIENTETRDQPKNRAKAMQLLKSQLYDRAMKKRM 307

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           E     E++K +I WG QIRSYV    + VKD RTN + +    V++G LD F+KA L 
Sbjct: 308 EAQAKVEAAKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVDSVMNGKLDGFIKAYLM 365


>gi|160947003|ref|ZP_02094206.1| hypothetical protein PEPMIC_00965 [Parvimonas micra ATCC 33270]
 gi|158447387|gb|EDP24382.1| hypothetical protein PEPMIC_00965 [Parvimonas micra ATCC 33270]
          Length = 365

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 125/351 (35%), Positives = 200/351 (56%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCD 68
           LFD  +  V++   L  K  DP + +++   + L +E   +   +   +E    +  L +
Sbjct: 10  LFDKLELLVEKFEELEKKIIDPEIMKDMNVWQKLAKEHGDMKPIVEKYREYSKHKKELEE 69

Query: 69  NLILLELALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           N  +L+ +L+++   +++E        I+ E +  +   L     D  + ++EV AG GG
Sbjct: 70  NKEMLKESLDDEMKELVKEEISELEDSIEKEEQDLKILLLPKDPNDEKNVFMEVRAGTGG 129

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  LLRMY  +A+K+K+KTE + I +    GIK    L+KG  AY  LK E GV
Sbjct: 130 DEAGLFAEDLLRMYRMFADKQKWKTEIMSISEQGVGGIKEVVFLVKGHGAYSKLKYESGV 189

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS +++ V P   + +++ I+++D RID YRASG GGQ VNTTD
Sbjct: 190 HRVQRVPATESSGRIHTSAATVAVLP-EVEDVDVVINQNDLRIDVYRASGNGGQCVNTTD 248

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTGVVV CQ E+SQ KNK +A  +L+++LYE   +++    +I ++ K++IG
Sbjct: 249 SAVRITHIPTGVVVTCQDEKSQLKNKEKAMKILKSRLYEKYQEEQN--KDIADARKSQIG 306

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R N+        L+GD+ + + A +   +
Sbjct: 307 SGDRSERIRTYNF-PQGRVTDHRINMTIYQLDSFLNGDISEMIDALITSDQ 356


>gi|254180490|ref|ZP_04887088.1| peptide chain release factor 1 [Burkholderia pseudomallei 1655]
 gi|184211029|gb|EDU08072.1| peptide chain release factor 1 [Burkholderia pseudomallei 1655]
          Length = 360

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 114/346 (32%), Positives = 176/346 (50%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72
            D    RL+ LN      ++  ++ + + L RE   +   +    + +    D      L
Sbjct: 9   LDQLTTRLAELNDLLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRQARADELAAQEL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L  A   D        + +                     D  + ++E+ AG GG ES  
Sbjct: 69  LADASMRDFAEDELRGARDRMGRLAAELQTMLL--PKDPNDERNIFVEIRAGTGGDESAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R
Sbjct: 127 FAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THI TG+VV+CQ +RSQHKNK +A  +L A++ +   Q  E+ A    + K+ IG G   
Sbjct: 247 THISTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N+       ++DGDLD+ + A ++  +
Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYKLEQIMDGDLDELIAALVSEHQ 349


>gi|296137058|ref|YP_003644300.1| peptide chain release factor 1 [Thiomonas intermedia K12]
 gi|295797180|gb|ADG31970.1| peptide chain release factor 1 [Thiomonas intermedia K12]
          Length = 358

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 121/344 (35%), Positives = 184/344 (53%), Gaps = 8/344 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            L D  +   +R   L+     P    ++   + + RE   L   +    + + +  D  
Sbjct: 4   SLLDKLEQMQRRADELDALLAAPDCTADLQRFRNMTRELAELQAVVGLYVQYKAKTEDLS 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
               L  + D   + Q+   + +          Q   L     DS + ++E+ AG GG E
Sbjct: 64  QAESLLSDPDMKELAQQEIQDARAALDALEAQLQVALLPRDPDDSRNVFVEIRAGTGGEE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           S  +A  LLRMY R+AE++++ TE +     +  G K   L + G  AYG LK E G HR
Sbjct: 124 SALFAADLLRMYARYAERKRWATEVISESPSDLGGYKEVILRVAGEGAYGLLKYESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R HTS +++ V P +D++  I+I+ SD RIDT+RASGAGGQH+N TDSA
Sbjct: 184 VQRVPKTETQGRIHTSAATVAVMPEMDEAQAIQINPSDLRIDTFRASGAGGQHINKTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +RITH+PTG+VV+CQ ERSQH+NKA+A ++L A+L E E Q R+       + K+ +G G
Sbjct: 244 IRITHLPTGLVVECQDERSQHRNKARALSVLAARLAERERQSRQAE--EAATRKSLVGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
               +IR+Y   P   V + R N+       +LDGDLD+ + A 
Sbjct: 302 DRSDRIRTYNF-PQGRVSEHRINLTLYKIDAILDGDLDELLTAL 344


>gi|238763000|ref|ZP_04623967.1| Peptide chain release factor 1 [Yersinia kristensenii ATCC 33638]
 gi|238698758|gb|EEP91508.1| Peptide chain release factor 1 [Yersinia kristensenii ATCC 33638]
          Length = 360

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 115/337 (34%), Positives = 175/337 (51%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D ++  +    + L RE   L +     KE +    D      +
Sbjct: 9   LEALQERHEEVLAHLGDANVIADQDRFRALSREYAQLTDVTRCFKEWRSVQDDIEAAEMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+       R +   +  Q   L     D  D +LE+ AG GG E+  +A
Sbjct: 69  LEDPEMREMAQDELKEAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             + RMY+R+AE R++K E +   +GE  G K     + G   +G LK E G HR+ R+ 
Sbjct: 129 GDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGDGVFGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR+         +  +G G    +
Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQ--LAEASERRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQ 342


>gi|288923233|ref|ZP_06417373.1| peptide chain release factor 2 [Frankia sp. EUN1f]
 gi|288345407|gb|EFC79796.1| peptide chain release factor 2 [Frankia sp. EUN1f]
          Length = 366

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 142/337 (42%), Positives = 202/337 (59%), Gaps = 4/337 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D +   +R   L  +  DP LW +   A+ + R    +   I+ +  +
Sbjct: 12  LDATLAGIETVLDIEGLRRRAQELEQEAADPDLWSDQARAQAVTRRLSGVKGDIARVDGL 71

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D +  L+L  E+    +  +     +    ++   +  +LLSGE D  DA +++ 
Sbjct: 72  RRRLDDLIAALDLGDEDLLAEMAVDLPSLTR----DISALEVRTLLSGEYDERDAIVQLS 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ DW  MLLRMY RWAE+  + TE  +  + EEAG+KSAT  ++ P AYG L+
Sbjct: 128 AGAGGVDAADWTAMLLRMYLRWAERHGYATEVFDTSEAEEAGLKSATFQVRCPYAYGTLR 187

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+ +RR TSF+ + V P V+ S  ++I E + RID +R+SG GGQ 
Sbjct: 188 SEHGVHRLVRISPFDNQNRRQTSFAGVEVTPAVEVSDHVDIDEKELRIDIFRSSGPGGQG 247

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTG+VV CQ ERSQ +NKA A  +L+AKL E    +           
Sbjct: 248 VNTTDSAVRITHLPTGIVVTCQNERSQLQNKAAAMMVLQAKLLERRRAEEAAEKQRLTGG 307

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
             ++ +G QIR+YVL PYQMVKDLRT +E ++   VL
Sbjct: 308 PQDVSFGSQIRNYVLHPYQMVKDLRTEVETSNTGAVL 344


>gi|121997785|ref|YP_001002572.1| peptide chain release factor 1 [Halorhodospira halophila SL1]
 gi|166223563|sp|A1WVQ8|RF1_HALHL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|121589190|gb|ABM61770.1| bacterial peptide chain release factor 1 (bRF-1) [Halorhodospira
           halophila SL1]
          Length = 363

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 114/341 (33%), Positives = 183/341 (53%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72
            +   +R   +  +  DP +  +  +   L RE   L+  +  +   +   D +     +
Sbjct: 9   LERMAERHEEIGAQLADPDVVGDPSKFAELSREYARLEPVVQDLNAYRAEADTVASAEAM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L     E      QE ++  +R++      Q   + +   D  + +LEV AGAGG E+  
Sbjct: 69  LNDGDAEIRALAEQELAEAQRRLEELEGALQRHLVPTDPNDQRNIFLEVRAGAGGDEAAL 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LLRMY R+AE++ +KTE L   +GE  G +     + G + Y  LK E G HR+ R
Sbjct: 129 FAGDLLRMYMRYAERQGWKTEILSAREGEHGGYREVIARVSGRSVYARLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ + P +D+   IE++ +D R+DT+R+SGAGGQHVNTTDSA+RI
Sbjct: 189 VPATESQGRIHTSACTVAILPELDEVSAIEVNTADLRVDTFRSSGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+P+G+VV+CQ ERSQ+KN+A+A  +L+A+L E E  K++      E  +  +G G   
Sbjct: 249 THLPSGLVVECQDERSQNKNRAKAIALLQARLTEQERAKQQSER--SEQRRLAVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            +IR+Y   P   V D R  +       V++G +D+ +   
Sbjct: 307 ERIRTYNF-PQGRVTDHRIGLTLYKLEQVMEGGMDELLDGL 346


>gi|260584605|ref|ZP_05852351.1| peptide chain release factor 1 [Granulicatella elegans ATCC 700633]
 gi|260157628|gb|EEW92698.1| peptide chain release factor 1 [Granulicatella elegans ATCC 700633]
          Length = 359

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 107/347 (30%), Positives = 169/347 (48%), Gaps = 12/347 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D+ + R   L+    DP +  +      L +E  +L   +   K  Q  + +   
Sbjct: 1   MFDQLDSFIIRYDELSELLSDPDVISDTKRFMELTKEESNLRPKVETFKRYQQVVEEIGD 60

Query: 72  LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             E+  E  D  + +   +      +      E  +F  L     D  +  +E+   AGG
Sbjct: 61  TEEMLGEGLDSEMAEMAKEELASLKKEKVELEEKIKFLLLPEDPNDGKNIIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  LL MY ++AE + ++ E ++ +     G K   L+I G N +  LK E G 
Sbjct: 121 DEAALFAGDLLSMYQKYAESQGWRVEVMDANVTGIGGYKEVILMITGDNVFSKLKYESGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P  ++       + D R+D Y ASGAGGQHVN T 
Sbjct: 181 HRVQRVPSTESQGRVHTSTATVVVMPEAEEVEIEL-EDKDIRVDIYHASGAGGQHVNKTA 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+VV  Q ERSQ KN+ +A  +LRA++Y+   Q  E  +    + K+ +G
Sbjct: 240 SAVRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYDKISQ--EAQSEYDANRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            G    +IR+Y   P   V D R  +       VL G +D+ + A +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDQVLAGKIDEIVDALI 343


>gi|150388171|ref|YP_001318220.1| peptide chain release factor 1 [Alkaliphilus metalliredigens QYMF]
 gi|166977357|sp|A6TK43|RF1_ALKMQ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|149948033|gb|ABR46561.1| peptide chain release factor 1 [Alkaliphilus metalliredigens QYMF]
          Length = 357

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 103/352 (29%), Positives = 185/352 (52%), Gaps = 12/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68
           + D      ++   L  K  DP +  + ++ + L++E   ++  +   +E +     L +
Sbjct: 1   MLDKLAFLQEKYEDLGEKISDPEIINDQVQWQKLIKEHSEIEPIVMKYREYKTTQQALGE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAG 126
              ++     + +   + +         +    +Q + +   +   D  +  +E+  GAG
Sbjct: 61  TKEIMHDKATDAELKEMAKMEVEELEESIVEMEEQLKVMLLPTDPNDDKNVIVEIRGGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A +L RMYTR+AE+  +K E + +++    G K    +IKG  AY  LK E G
Sbjct: 121 GDEAGLFAAVLFRMYTRYAERSGWKVEMMSLNESGVGGYKEVIFMIKGKGAYSQLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ RI   +S  R HTS +++ + P  +D  E+ I  ++ RID +R+SG GGQ VNTT
Sbjct: 181 AHRVQRIPTTESGGRIHTSTATVVIMPEAEDVGEVNIDTNELRIDVFRSSGNGGQSVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTG+VV CQ  +SQ KNK +A  +L+++L +  +Q+++    I +  ++++
Sbjct: 241 DSAVRITHLPTGLVVSCQDGKSQLKNKEKAMKVLKSRLLDQMIQEQDAE--ISQDRRSKV 298

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R N+        LDG++++ + + +   +
Sbjct: 299 GTGDRSERIRTYNF-PQGRVTDHRINVTVYKLDAFLDGEINEMIDSLITSAQ 349


>gi|319942226|ref|ZP_08016542.1| peptide chain release factor 1 [Sutterella wadsworthensis 3_1_45B]
 gi|319804279|gb|EFW01171.1| peptide chain release factor 1 [Sutterella wadsworthensis 3_1_45B]
          Length = 358

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 176/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +RL  ++     P    ++   + L RER  ++  +  +   +    D     EL
Sbjct: 10  LSALSRRLEEIDRMLAAPETAADMNLFRDLSRERGEIEPIVGRLHAYERAESDLAAAQEL 69

Query: 76  ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           A + +  +   E S       +   +  +   L     D  + +LE+ AG GG ES  +A
Sbjct: 70  AADPEMKAFAAEESAAATHELERIEQELRIALLPKDPNDDRNIFLEIRAGTGGDESALFA 129

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE   ++TE +  ++ E  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 130 GDLLRMYLRYAEGHGWQTEIVSKNESELGGYKEVIVRIIGRGAYSKLKFESGGHRVQRVP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P +D+  E++++ +D RID +RASGAGGQH+  TDSAVRITH
Sbjct: 190 ATESQGRIHTSACTVAVLPELDEIEEVKLNPADLRIDVFRASGAGGQHIQKTDSAVRITH 249

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQ +NKA+A  +L ++LY    Q  E+        K  IG G    +
Sbjct: 250 LPTGMVVECQDERSQTQNKARAMAVLASRLY--AQQVAEQHEREASERKNLIGSGDRSER 307

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       +++GDL++ + A     +
Sbjct: 308 IRTYNY-PQGRVTDHRINLTLYRLEAIMNGDLEEIITALTTEHQ 350


>gi|307544472|ref|YP_003896951.1| peptide chain release factor 1 [Halomonas elongata DSM 2581]
 gi|307216496|emb|CBV41766.1| peptide chain release factor 1 [Halomonas elongata DSM 2581]
          Length = 363

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 118/343 (34%), Positives = 182/343 (53%), Gaps = 10/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R   L     DP +  +    +   RE   LD+ ++  ++ +    D      L
Sbjct: 9   LDTFAERFEELAALLADPEVIADQPRFRDYSREYAELDDLVAAWRDYRAVEEDIEAAESL 68

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN--DAYLEVHAGAGGTESQD 132
           A + D +   L        R KLE    + + LL      +  + +LE+ AG GG E+  
Sbjct: 69  ADDADAEMRELASMERESGREKLEALETRLKQLLVPRDPDDAGNVFLEIRAGTGGDEAAL 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE   +K E +    G++ G K     +KG   Y  LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAELHGWKVEIVSASHGDQGGYKELISRVKGEGVYARLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P   +  EI+I  ++ R+DT+RASGAGGQHVNTTDSA+RI
Sbjct: 189 VPATESQGRIHTSACTVAVMPEAAEVGEIDIDPNELRVDTFRASGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+P+GVVV+CQ+ERSQHKN+A+A ++L A+L +     + +     +  ++ +G G   
Sbjct: 249 THLPSGVVVECQEERSQHKNRAKAMSLLAARLKQAAQDSQRQ--QQADERRSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
            +IR+Y   P   V D R N+     SDV+ G+ LD+ ++  +
Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYKLSDVVGGEGLDEVIEPLI 348


>gi|163750755|ref|ZP_02157990.1| peptide chain release factor 1 [Shewanella benthica KT99]
 gi|161329450|gb|EDQ00444.1| peptide chain release factor 1 [Shewanella benthica KT99]
          Length = 361

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 113/338 (33%), Positives = 185/338 (54%), Gaps = 9/338 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     DP +  +    + L +E   L++ ++  K  Q    D     E+
Sbjct: 9   LEGLLERNEEVLALLSDPGIIADQTRFRALSKEYSQLEDVVAAFKGFQQATEDLDAAKEM 68

Query: 76  ALEEDDCSILQETSDNLQR---IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E D         +  +    IK   +  Q   L     D N+A++E+ AGAGG E+  
Sbjct: 69  LSENDPEIKQMAQEEMKEAKSLIKKLEDELQILLLPKDPNDDNNAFVEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+ E  +++TE +  ++GE  G K   + + G   YG LK E G HR+ R
Sbjct: 129 FAGDLYRMYSRYFESNRWQTEIMNANEGEHGGFKEIIIKVSGEGVYGRLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   V ++  I+I+ +D ++DT+RASGAGGQHVN TDSA+R+
Sbjct: 189 VPETESQGRVHTSACTVAVLVEVPEAEAIKINPADLKVDTFRASGAGGQHVNKTDSAIRL 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIP+G+VV+CQ +RSQHKN+AQA ++L A++  +E +KR  +     + +  +G G   
Sbjct: 249 THIPSGIVVECQDQRSQHKNRAQAMSVLTARIQAVEDEKRRSVEET--TRRNLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            +IR+Y   P   V D R N+     +++++G+LD  +
Sbjct: 307 ERIRTYNY-PQGRVSDHRINLTLYRLNEIMEGELDVLI 343


>gi|238019080|ref|ZP_04599506.1| hypothetical protein VEIDISOL_00942 [Veillonella dispar ATCC 17748]
 gi|237864335|gb|EEP65625.1| hypothetical protein VEIDISOL_00942 [Veillonella dispar ATCC 17748]
          Length = 360

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 110/348 (31%), Positives = 182/348 (52%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 +   L  +  DP +     E + L R+   L   +   +  +  L      +E+
Sbjct: 6   LQVIEDKFMDLEQRISDPEVIARQDEWRKLTRQHAQLSETVETFRTYKKVLAGIDEAMEV 65

Query: 76  ALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             ++      +E +         + +   E  Q   L     D  +  +E+  GAGG E+
Sbjct: 66  IEDKSMDEEFREMAQEELKELKPQKEELEEKLQILLLPKDPNDDKNIIIEIRGGAGGDEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMYT++AE + ++ E ++ ++ E  G K     + G N Y  +K E GVHR+
Sbjct: 126 ALFAGDLFRMYTKYAESQGWRCEIIDANEPELGGFKEVIFSVDGENVYSKMKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS  ++ V P   + ++IE++E D +IDTYRASGAGGQH+N T+SAV
Sbjct: 186 QRVPATETQGRVHTSTVTVAVLP-EMEDVDIEVNEKDLKIDTYRASGAGGQHINKTESAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+P+G+VV CQ +RSQ +N+ +A  +LRAKL +    ++E I+++    K+++G G 
Sbjct: 245 RITHLPSGIVVACQDQRSQLQNREKAMRVLRAKLQD--QAEQEAISSMAADRKSQVGTGD 302

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       +L+GDLD+ ++A  A  +
Sbjct: 303 RSERIRTYNY-PQGRVTDHRINLTLYKLDAILNGDLDEIIQALNAADQ 349


>gi|255074407|ref|XP_002500878.1| predicted protein [Micromonas sp. RCC299]
 gi|226516141|gb|ACO62136.1| predicted protein [Micromonas sp. RCC299]
          Length = 428

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 134/372 (36%), Positives = 204/372 (54%), Gaps = 19/372 (5%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++     + D +     ++ L+    +  LW + I+AK +M E       ++  +  
Sbjct: 43  LETRVKDALDVVDVERLAATVADLDAAASEGTLWDDPIKAKAVMAELADAKEQLATARGF 102

Query: 63  QDRLCDNLILLELALEE-----------------DDCSILQETSDNLQRIKLEVEYKQFE 105
           ++ L D  + LE+   E                  D +IL E SD    ++ +++  +  
Sbjct: 103 ENLLGDAAVALEMIDAEREDDSLSGAAANDASAGPDPTILAELSDACDNLERQLDKWEVR 162

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LL G+ D+  A + V+AGAGGT++QDWA ML RMY  W   R F    +E  +GEEAG+
Sbjct: 163 RLLGGKYDAMPALVNVYAGAGGTDAQDWAEMLERMYRGWCNSRGFTWRTVERSEGEEAGL 222

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP--VVDDSIEIEI 223
           KS T  ++G  AYG+L+ E+G HRLVR SP+  ++ R TSF+++ V P        E+ +
Sbjct: 223 KSVTFEVQGRFAYGYLRSERGTHRLVRQSPFKKDATRQTSFAAVEVTPVLDEGSVEELTL 282

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
            +SD  I T R+ GAGGQ+VN  ++AVRI H+PTG+ V+C++ERSQ  NKA+    L+AK
Sbjct: 283 RDSDLEISTMRSGGAGGQNVNKVETAVRIKHVPTGITVRCEEERSQAANKAKGLARLKAK 342

Query: 284 LYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
           L  +  ++R               WG+QIR+YV  PY+MVKD+RT  E +    V+ GDL
Sbjct: 343 LVAVAEEQRAADVAAIRGDAVRAEWGQQIRNYVFHPYKMVKDVRTGKETSDVDGVMSGDL 402

Query: 344 DDFMKATLAIKK 355
           D+FM   L  K+
Sbjct: 403 DEFMDEFLRWKR 414


>gi|146283509|ref|YP_001173662.1| peptide chain release factor 1 [Pseudomonas stutzeri A1501]
 gi|166223591|sp|A4VPB9|RF1_PSEU5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145571714|gb|ABP80820.1| peptide chain release factor 1 [Pseudomonas stutzeri A1501]
          Length = 360

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 117/342 (34%), Positives = 178/342 (52%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL---IL 72
            D    R   L     D  +  +    +   RE   ++  I   +++     D      L
Sbjct: 9   LDILQDRFEELTALLGDAEVISDQSRFRAYSREYAEVEPVIVAYRQLCKVQQDLEGAQAL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L+ +  +      +E ++   +++      Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LKDSDPDMREMAEEEVAEAKAQLETLEANLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AEK+ ++ E L   +GE  G K     ++G N Y  LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAEKQGWRVEILSESEGEHGGYKEVISRVEGDNVYAKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   +EI+ ++ RIDTYR+SGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQAAVEINPAELRIDTYRSSGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ+ERSQHKN+A+A   L AKL +   Q       I E+ K  +G G   
Sbjct: 249 THLPTGIVVECQEERSQHKNRAKAMAWLAAKLQD--RQDAAAHKEISETRKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +IR+Y   P   V D R N+   S ++V+ G ++  ++  L
Sbjct: 307 ERIRTYNF-PQGRVTDHRVNLTLYSLNEVIGGAVEQVIEPLL 347


>gi|51891211|ref|YP_073902.1| peptide chain release factor 1 [Symbiobacterium thermophilum IAM
           14863]
 gi|81610729|sp|Q67TD5|RF1_SYMTH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|51854900|dbj|BAD39058.1| peptide chain release factor 1 [Symbiobacterium thermophilum IAM
           14863]
          Length = 356

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 176/347 (50%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  VQR   L  K  DP +  N  E + + RE   L   +   +  Q    +   +LE+
Sbjct: 5   LEGVVQRYEDLTYKLGDPSVINNPTEYRQVAREHNRLGPIVEKFRAYQKTERELDDVLEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D       +  L+ +K +     +  +   L     D  +  +E+ AGAGG E+ 
Sbjct: 65  LEGPLDPEERALFNQELRDLKEKLQTLSDELRILLLPRDPNDDKNVIMEIRAGAGGDEAS 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR AE+ K+KTE L I + E  GIK     I    AY  LK E GVHR+ 
Sbjct: 125 LFAAELFRMYTRLAERHKWKTEVLSISENEAGGIKEVLFQINAEGAYSRLKYEGGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P   + ++IEI   D +I+  RA GAGGQHVN T+SAVR
Sbjct: 185 RVPVTESQGRIHTSTVTVAVMP-EMEEVDIEIKPEDLKIEVQRAGGAGGQHVNKTESAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +TH+PTG+VV C  ERSQ +N+ +A  +LRA++ +   Q+ +         + ++G G +
Sbjct: 244 MTHLPTGIVVYCADERSQMQNREKALRVLRARVADYYAQQAKSEEEQL--RRAQVGTGER 301

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              IR+Y   P   V D R  +   + + V+DG++D  + A    ++
Sbjct: 302 SEKIRTYNF-PQDRVTDHRIGLTVHNIAAVMDGEIDHIIDALAQHEQ 347


>gi|77460969|ref|YP_350476.1| peptide chain release factor 1 [Pseudomonas fluorescens Pf0-1]
 gi|119361582|sp|Q3K6W9|RF1_PSEPF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|77384972|gb|ABA76485.1| peptide chain release factor RF-1 [Pseudomonas fluorescens Pf0-1]
          Length = 360

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 120/346 (34%), Positives = 174/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +  + +   +E   L+  +   K++     D      L
Sbjct: 9   LDILQDRFEELTALLGDGEVISDQTKFRAYSKEYAELEPVVQGYKKLLGVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE---VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +  +  +L        Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LKDSDPDMREMAVEEVREAKELLITLESDLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AE+R ++ E L  ++GE  G K     I+G N YG LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARIEGDNVYGKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVNTTDSA+RI
Sbjct: 189 VPATESQGRIHTSACTVAVLPEPDEREAIEINPADLRVDTYRSSGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG VV+CQ+ERSQHKN+A+A   L AKL +   Q       I    K  +G G   
Sbjct: 249 THIPTGTVVECQEERSQHKNRARAMAWLSAKLND--QQTAAAANAIASERKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y       V D R N+   S  ++L G ++  ++  LA  +
Sbjct: 307 ERIRTYNFA-QGRVTDHRVNLTLYSLDEILAGGVEAVIEPLLAEYQ 351


>gi|188590258|ref|YP_001919883.1| peptide chain release factor 1 [Clostridium botulinum E3 str.
           Alaska E43]
 gi|238689644|sp|B2UZI5|RF1_CLOBA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|188500539|gb|ACD53675.1| peptide chain release factor 1 [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 360

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 118/344 (34%), Positives = 190/344 (55%), Gaps = 11/344 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              +   L+ K  DP + QN  E + L +E+  L+  ++  KE +  + D  +  E+  +
Sbjct: 9   IENKYDELSVKISDPSIMQNQNEWRKLCKEQADLEIIVNAYKEYKQVIEDLQVNKEMLSD 68

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQDWA 134
           E D  + +  ++ +  +       + E           D  + ++E+  GAGG E+  +A
Sbjct: 69  ESDREMKEMLNEEISSLAEREIELEKEIQILLLPKDPNDDKNVFVEIRGGAGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+AE++++ TE + +++ +  G K    +IKG  AY  LK E GVHR+ R+ 
Sbjct: 129 YNLFRMYTRYAERQRWSTEIMSLNETDIGGFKEVVFMIKGNGAYSKLKYESGVHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S+ R HTS  ++ V P   D +EIEI++ D RID +RASG GGQ VNTTDSAVRITH
Sbjct: 189 DTESSGRIHTSTVTVAVLP-EVDDVEIEIADKDVRIDVFRASGHGGQCVNTTDSAVRITH 247

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +P+G+VV CQ E+SQ KNK +A  +LR++L+E   Q+R +   I    K+++G G    +
Sbjct: 248 LPSGLVVSCQDEKSQLKNKEKAMKVLRSRLFEKAEQERAD--GIAADRKSQVGTGDRSER 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R  +        LDG++ + + A +   +
Sbjct: 306 IRTYNY-PQGRITDHRIGLTLYKLDSFLDGEVQEMINALITADQ 348


>gi|187935755|ref|YP_001884696.1| peptide chain release factor 1 [Clostridium botulinum B str. Eklund
           17B]
 gi|238691625|sp|B2TJY5|RF1_CLOBB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|187723908|gb|ACD25129.1| peptide chain release factor 1 [Clostridium botulinum B str. Eklund
           17B]
          Length = 360

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 190/344 (55%), Gaps = 11/344 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              +   L+ K  DP + QN  E + L +E+  L+  ++  KE +  + D  +  E+  +
Sbjct: 9   IENKYDELSVKISDPSIMQNQNEWRKLCKEQADLEIIVNAYKEYKQVIEDLQVNKEMLSD 68

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQDWA 134
           E D  + +  ++ +  +       + E           D  + ++E+  GAGG E+  +A
Sbjct: 69  ESDREMKEMLNEEIASLSQREVELEKEIQILLLPKDPNDDKNVFVEIRGGAGGEEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+AE++++ TE + +++ +  G K    +IKG  AY  LK E GVHR+ R+ 
Sbjct: 129 YNLFRMYTRYAERQRWSTEIMSLNETDIGGFKEVVFMIKGNGAYSKLKYESGVHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S+ R HTS  ++ V P   D +EIEI++ D RID +RASG GGQ VNTTDSAVRITH
Sbjct: 189 DTESSGRIHTSTVTVAVLP-EVDDVEIEIADKDVRIDVFRASGHGGQCVNTTDSAVRITH 247

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +P+G+VV CQ E+SQ KNK +A  +LR++L+E   Q+R +   I    K+++G G    +
Sbjct: 248 LPSGLVVSCQDEKSQLKNKEKAMKVLRSRLFEKAEQERAD--GIAADRKSQVGTGDRSER 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R  +        LDGD+ + + A +   +
Sbjct: 306 IRTYNY-PQGRITDHRIGLTLYKLDSFLDGDVQEMINALITADQ 348


>gi|123965444|ref|YP_001010525.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9515]
 gi|123199810|gb|ABM71418.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT
           9515]
          Length = 354

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 138/344 (40%), Positives = 205/344 (59%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L  +FD  + V +   L     +P  W N   AK  M     + + +  + + +  + D 
Sbjct: 2   LRIVFDVPSLVAKRKELEQIAAEPDFWINQAAAKKHMLNLDDVRDQLQLLDKWKILIADA 61

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              LEL   + +  ++ E+   L  ++  ++  +F+ LLSGE D   A + ++AGAGGT+
Sbjct: 62  EASLELYSLDPEEEMIVESHLGLVTLRENLDKWEFQRLLSGEYDKESAIVSINAGAGGTD 121

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDW  +LLRMY+RWA+      E  ++ +GEEAGIKS T  + G  AYG+L+ E+G HR
Sbjct: 122 AQDWVEILLRMYSRWADNNGMSLEITDLSNGEEAGIKSVTFEVNGKYAYGYLQNEKGTHR 181

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVRISP+++N +R TSF+ + V P +D SI +EI + D  I T R+ GAGGQ+VN  ++A
Sbjct: 182 LVRISPFNANGKRQTSFAGVEVMPKLDQSISLEIPDKDLEITTSRSGGAGGQNVNKVETA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRI H+P+G+ V+C QERSQ +NK +A  +L+AKL  +  ++R    +  +    E  WG
Sbjct: 242 VRILHLPSGIAVRCTQERSQLQNKEKAMLLLKAKLLVIAKEQRAAEISDIKGDIVEAAWG 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            QIR+YV  PYQMVKDLRT  E      VL+G LD F+   L +
Sbjct: 302 NQIRNYVFHPYQMVKDLRTMKETNDLDGVLNGGLDQFIHELLRM 345


>gi|146311983|ref|YP_001177057.1| peptide chain release factor 1 [Enterobacter sp. 638]
 gi|166977363|sp|A4WBC6|RF1_ENT38 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145318859|gb|ABP61006.1| bacterial peptide chain release factor 1 (bRF-1) [Enterobacter sp.
           638]
          Length = 360

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 113/337 (33%), Positives = 175/337 (51%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAATIADQDRFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE       R +   +  Q   L     D  +A++EV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQEELQEAKARAEEMEQQLQVLLLPKDPDDERNAFVEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +  ++GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESRRWRVEIMSANEGEHGGYKEVIAKISGEGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P V ++   +I+  D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPEVPEAELPDINPGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L +++   E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGSRIRAAEIAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      ++++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTIYRLDEIMEGKLDSLIE 342


>gi|86147405|ref|ZP_01065718.1| peptide chain release factor 2 [Vibrio sp. MED222]
 gi|218708550|ref|YP_002416171.1| peptide chain release factor 2 [Vibrio splendidus LGP32]
 gi|85834833|gb|EAQ52978.1| peptide chain release factor 2 [Vibrio sp. MED222]
 gi|218321569|emb|CAV17521.1| Peptide chain release factor 2 [Vibrio splendidus LGP32]
          Length = 303

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 162/300 (54%), Positives = 217/300 (72%), Gaps = 1/300 (0%)

Query: 53  DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112
           +  +  I ++   + D   LLELA+EE+D     E    L  ++ ++E  +F  + SG+ 
Sbjct: 2   EAVVETIDQLDQGVEDVDGLLELAVEEEDQETFDEIEPELAELEAKLEKLEFRRMFSGDH 61

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D++D Y+++ +G+GGTE+QDW +M+LRMY RWA+ + FKTE +E+ DG+ AG+K AT+ I
Sbjct: 62  DASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWADSKGFKTEVIEVSDGDVAGLKGATVRI 121

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I I+I+ SD RID 
Sbjct: 122 SGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNITIDINPSDLRIDV 181

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELE+QK+
Sbjct: 182 YRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELEIQKQ 241

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                  E +K++IGWG QIRSYVL     +KDLRT IE  +   VLDGDLD F++A+L 
Sbjct: 242 NAEKQASEETKSDIGWGSQIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDKFIEASLK 300


>gi|21672964|ref|NP_661029.1| peptide chain release factor 1 [Chlorobium tepidum TLS]
 gi|28201874|sp|Q8KG45|RF1_CHLTE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|21646023|gb|AAM71371.1| peptide chain release factor 1 [Chlorobium tepidum TLS]
          Length = 357

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 105/352 (29%), Positives = 181/352 (51%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   +   +   +  +  DP +  +    + L +E   L   +    E          
Sbjct: 1   MFDKLQSIKDKFQTIEQQLSDPEVVADQNRFRKLNKEYSSLKEIVRAYDEWSRTKKQLDE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
              +   E+D  +     +    ++  +   +       L   EADS +A +E+ AG GG
Sbjct: 61  AHSMQKNENDPEMRALVEEEAGELQERLPKLEQQLKILLLPKDEADSRNAIIEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGPNAYGWLKGEQG 186
            E+  +A  L+RMY R+AE++ +  + LE+ +G   G  K  +L + G N YG LK E G
Sbjct: 121 DEAGLFAADLMRMYQRYAERQGWSCQTLEVSEGSVPGSLKEVSLEVSGHNVYGILKFESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +S+ V P   + +++EI + D  IDT+R+ G GGQ+VN  
Sbjct: 181 VHRVQRVPETETQGRIHTSAASVAVLP-EAEEVDVEIRKEDLLIDTFRSGGKGGQNVNKV 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++AVRITH+P+G+VV CQ+ERSQ +N+ +A  MLR+KLY+L++ ++++        ++ +
Sbjct: 240 ETAVRITHVPSGIVVACQEERSQLQNRERAMKMLRSKLYDLQIAEQQKSRADL--RRSMV 297

Query: 307 GWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             G +   IR+Y   P   V D R      +   ++ G+LD  ++A     +
Sbjct: 298 TTGDRSAKIRTYNF-PQSRVTDHRIGFTSHALPQIMQGELDPLIEALRMHDQ 348


>gi|114768932|ref|ZP_01446558.1| peptide chain release factor 1 [alpha proteobacterium HTCC2255]
 gi|114549849|gb|EAU52730.1| peptide chain release factor 1 [alpha proteobacterium HTCC2255]
          Length = 351

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 121/344 (35%), Positives = 184/344 (53%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R  +L  K  D        E   L +E   L   +  I+  +  L D     E+
Sbjct: 7   LEQICARFDYLEAKMADGSAVD---EIAKLSKEYSDLKPVVDQIENYKATLLDISEAEEM 63

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
            L+ +   + +E   NL+    +         L   EAD   A +E+ AG GG E+  +A
Sbjct: 64  LLDPELKVLAEEELPNLKEKLPILEHKLLLSLLPKDEADDKPAIIEIRAGTGGDEAALFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+ E + +K E +E ++ E  G K A + +KG   +  LK E GVHR+ R+ 
Sbjct: 124 GDLLRMYNRFCEDQGWKFEIVEGNETELGGYKEAIINVKGVGVFARLKYESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ + P   ++I++EI  +D R+DTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 184 TTESGGRVHTSAATVAIMP-EAENIDLEIPTTDIRLDTYRSSGAGGQHVNTTDSAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG++V    E+SQH+N+  A N+LR +LY+L  Q+++       + K ++G G    +
Sbjct: 243 LPTGLIVTSS-EKSQHRNREIAMNVLRTRLYDL--QRQQAADERAATRKDQVGSGDRSER 299

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       V+ GDL++F+ A  A  +
Sbjct: 300 IRTYNF-PQGRVSDHRINLTLYKLDQVMQGDLNEFIDALTADDQ 342


>gi|313905737|ref|ZP_07839097.1| peptide chain release factor 1 [Eubacterium cellulosolvens 6]
 gi|313469444|gb|EFR64786.1| peptide chain release factor 1 [Eubacterium cellulosolvens 6]
          Length = 360

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 125/351 (35%), Positives = 184/351 (52%), Gaps = 11/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  ++   RL  +  +  DP    +    + LM+E+  L          +        
Sbjct: 1   MFEKLEDVQIRLDEILCQLSDPATAGDSARMQKLMKEQAELSPVAEMYAAYRKNEETISD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            LEL   E D  + +   + LQ  K      +       L     D     +E+ AGAGG
Sbjct: 61  SLELLESESDPDMREMLKEELQEAKANRSKYERELQLLLLPKDPNDDKSVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RMY R+AEK++++TE + I +    G+K  +  I G  AY  LK E GV
Sbjct: 121 EEAALFAYEIYRMYVRYAEKQRWQTELMSIDETGLGGLKECSFEISGSGAYSKLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P VDD I+IEI + D RID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPATESGGRIHTSTITVAVMPKVDDDIQIEIPDKDVRIDVMRASGNGGQCVNTTD 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V+  Q E+SQ +NKA+AW +LR+KLY LE++KR +        +++IG
Sbjct: 241 SAVRLTHYPTGIVIYSQTEKSQIQNKAKAWELLRSKLYVLEMEKRHDAEADL--RRSQIG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+GDLD+ ++   A  +
Sbjct: 299 TGDRSEKIRTYNF-PQGRVTDHRIKLTLHQIDSILNGDLDELIQTLTAADQ 348


>gi|171058449|ref|YP_001790798.1| peptide chain release factor 2 [Leptothrix cholodnii SP-6]
 gi|170775894|gb|ACB34033.1| peptide chain release factor 2 [Leptothrix cholodnii SP-6]
          Length = 300

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 148/297 (49%), Positives = 211/297 (71%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           ++ I  +   L DN  L E++ +E D + +      +  ++  +E  +F  + S  AD +
Sbjct: 2   VAAIDHLSSNLADNTELYEMSKDEGDLAGITAIEAEVVELRAMIEKLEFRRMFSNPADPS 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           + ++++ AGAGGTE+ DWA+MLLR Y ++ E++ FKT   +  +G+ AGIK+AT+ ++G 
Sbjct: 62  NCFIDIQAGAGGTEACDWASMLLRQYLKYCERKGFKTTIEDESEGDTAGIKAATIKVEGD 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+G L+ E GVHRLVR SP+DS+  RHTSF+S++VYP VDDSIEI+I+ +D R DT+RA
Sbjct: 122 YAFGHLRTETGVHRLVRKSPFDSSGGRHTSFASLFVYPEVDDSIEIDINPADVRTDTFRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQH+N TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+ E++KR E 
Sbjct: 182 SGAGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDFEMRKRMEA 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E +KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L 
Sbjct: 242 QQKLEDTKTDVGWGHQIRSYVLD-QSRIKDLRTNVETSATQKVLDGDLDAFIEASLK 297


>gi|78065073|ref|YP_367842.1| peptide chain release factor 1 [Burkholderia sp. 383]
 gi|119361516|sp|Q39K18|RF1_BURS3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|77965818|gb|ABB07198.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia sp.
           383]
          Length = 360

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 117/346 (33%), Positives = 176/346 (50%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72
            D    RL+ LN      ++  ++ + + L RE   L   +      +    D      L
Sbjct: 9   LDQLSTRLAELNDLLSRENVTADLDQYRKLTREHAELGPVVEQYALWRQSRSDETAAQEL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L      D       ++            K          D  + +LE+ AG GG ES  
Sbjct: 69  LGDLSMRDFAEDEIRSARESMSRLETELQKMLL--PKDPNDERNIFLEIRAGTGGDESAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R
Sbjct: 127 FAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV+CQ +RSQHKNK +A  +L A++ +   Q  E+ A    + K+ IG G   
Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N+       ++DGDLD+ + A ++  +
Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYRLEALMDGDLDELISALVSEHQ 349


>gi|261409698|ref|YP_003245939.1| peptide chain release factor 1 [Paenibacillus sp. Y412MC10]
 gi|261286161|gb|ACX68132.1| peptide chain release factor 1 [Paenibacillus sp. Y412MC10]
          Length = 355

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 107/351 (30%), Positives = 180/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D   +   R   L+    DP +  +  + +   +E+  L  A     E ++ + +   
Sbjct: 1   MLDRLQSLADRYEKLSELLCDPDVANDSKKLRDYSKEQSDLQPAYEAYVEYKNVIEELEA 60

Query: 72  LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +  E+ D  + +          QR +   E  +   L     D  +  +E+   AGG
Sbjct: 61  AKTMQGEKMDDEMREMVKMEIEELTQREQELAERIRILLLPKDPNDDKNVIIEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A+ L RMYTR+A+ + +K E ++++  +  G K    +I G  AY  +K E G 
Sbjct: 121 DEAALFASDLYRMYTRYADTQGWKVELMDVNTNDLGGFKEVIFMINGRGAYSKMKFESGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS S++ V P   + ++IEI + D R+DT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRIPTTESGGRIHTSTSTVAVMP-EAEEVDIEIHDKDIRVDTFCSSGAGGQSVNTTK 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V  CQ  +SQ+ NK +A  +LRA+++++  Q  EE A      K+++G
Sbjct: 240 SAVRVTHIPTGIVATCQDGKSQNSNKEKALQVLRARIFDMMRQ--EEEAKYAGERKSKVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       V++G++++ + A    ++
Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTVHKLDQVMNGEIEEIVSALTLAEQ 347


>gi|187777270|ref|ZP_02993743.1| hypothetical protein CLOSPO_00822 [Clostridium sporogenes ATCC
           15579]
 gi|187774198|gb|EDU38000.1| hypothetical protein CLOSPO_00822 [Clostridium sporogenes ATCC
           15579]
          Length = 358

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 125/347 (36%), Positives = 195/347 (56%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    +   L+ K  DP +  N  E + L +E   L+  ++  +E +    D     E+
Sbjct: 5   LNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLESDKEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  + +   + ++ + L++E  +       L     D  D ++E+ AGAGG E+ 
Sbjct: 65  LREESDKELREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A+ LLRMYTR+AE++ +K E + ++  +  G K  T+ +KG  AY  LK E GVHR+ 
Sbjct: 125 LFASNLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAVKGKGAYSRLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P   D ++I I+ +D RID YRASG GGQ VNTTDSAVR
Sbjct: 185 RVPDTESSGRIHTSTATVAVLP-EVDDVDININANDLRIDVYRASGHGGQCVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ E+SQ KNK +A  +L+A+L+E      E  A+I E  K+++G G  
Sbjct: 244 ITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAE--AERAASIAEDRKSQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R  +        LDGD+D+ ++A +   +
Sbjct: 302 SERIRTYNY-PQGRITDHRIGLTLYKLETFLDGDIDEVIEALVTEDQ 347


>gi|255993956|ref|ZP_05427091.1| peptide chain release factor 1 [Eubacterium saphenum ATCC 49989]
 gi|255993624|gb|EEU03713.1| peptide chain release factor 1 [Eubacterium saphenum ATCC 49989]
          Length = 357

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 112/352 (31%), Positives = 196/352 (55%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           + D  D  V++   L      P +  N    +  ++E   ++  +      K+ +  L D
Sbjct: 1   MLDKLDFIVEKYKELEAAVSKPEIIGNQPLWQKYIKEMSDMEPIVKTYSSFKKHKQELSD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGAG 126
              LL  A  +++   L +   +    ++  E +Q +   +     D  +  LE+ AG G
Sbjct: 61  AKELLAGAGGDEEMKDLAKLEISGLEDEINKEEEQLKILLIPKDPRDEKNVILEIRAGTG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  + + LLRMY+ +A+ + +KTE +E+++    GIK A +LIKG  A+  LK E G
Sbjct: 121 GEEAALFGSDLLRMYSMYADSKNWKTEIIELNETGLNGIKEAVMLIKGKGAFSRLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S+ R HTS +++ V P   D +E++++ +D R+D YR+SG GGQ VNTT
Sbjct: 181 VHRVQRVPTTESSGRVHTSAATVAVLP-EMDDVEVDLNPNDVRVDVYRSSGNGGQSVNTT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVR+TH PTG+VV CQ E+SQ KNK +A+ +L+++LY L+++++     + +  K+++
Sbjct: 240 DSAVRLTHEPTGIVVTCQDEKSQIKNKDKAFKVLKSRLYNLKMEEQN--KQLSDERKSQV 297

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +      + ++GD+D+ ++  +   +
Sbjct: 298 GSGDRSERIRTYNF-PQGRVSDHRIGLTIYKLDNFMNGDIDEVIEGLITADQ 348


>gi|251778025|ref|ZP_04820945.1| peptide chain release factor 1 [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
 gi|243082340|gb|EES48230.1| peptide chain release factor 1 [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
          Length = 360

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 118/344 (34%), Positives = 190/344 (55%), Gaps = 11/344 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              +   L+ K  DP + QN  E + L +E+  L+  ++  KE +  + D  +  E+  +
Sbjct: 9   IENKYDELSVKISDPSIMQNQNEWRKLCKEQADLEIIVNAYKEYKQVIEDLQVNKEMLSD 68

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQDWA 134
           E D  + +  ++ +  +       + E           D  + ++E+  GAGG E+  +A
Sbjct: 69  ESDREMKEMLNEEISSLSEREIELEKEIQILLLPKDPNDDKNVFVEIRGGAGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+AE++++ TE + +++ +  G K    +IKG  AY  LK E GVHR+ R+ 
Sbjct: 129 YNLFRMYTRYAERQRWSTEIMSLNETDIGGFKEVVFMIKGNGAYSKLKYESGVHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S+ R HTS  ++ V P   D +EIEI++ D RID +RASG GGQ VNTTDSAVRITH
Sbjct: 189 DTESSGRIHTSTVTVAVLP-EVDDVEIEIADKDVRIDVFRASGHGGQCVNTTDSAVRITH 247

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +P+G+VV CQ E+SQ KNK +A  +LR++L+E   Q+R +   I    K+++G G    +
Sbjct: 248 LPSGLVVSCQDEKSQLKNKEKAMKVLRSRLFEKAEQERAD--GIAADRKSQVGTGDRSER 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R  +        LDG++ + + A +   +
Sbjct: 306 IRTYNY-PQGRITDHRIGLTLYKLDSFLDGEVQEMINALITADQ 348


>gi|282850388|ref|ZP_06259767.1| peptide chain release factor 1 [Veillonella parvula ATCC 17745]
 gi|294792026|ref|ZP_06757174.1| peptide chain release factor 1 [Veillonella sp. 6_1_27]
 gi|294793891|ref|ZP_06759028.1| peptide chain release factor 1 [Veillonella sp. 3_1_44]
 gi|282579881|gb|EFB85285.1| peptide chain release factor 1 [Veillonella parvula ATCC 17745]
 gi|294455461|gb|EFG23833.1| peptide chain release factor 1 [Veillonella sp. 3_1_44]
 gi|294457256|gb|EFG25618.1| peptide chain release factor 1 [Veillonella sp. 6_1_27]
          Length = 360

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 110/348 (31%), Positives = 182/348 (52%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 +   L  +  DP +     E + L R+   L   +   +  +  L      +E+
Sbjct: 6   LQVIEDKFMDLEQRISDPEVIARQDEWRKLTRQHAQLSETVETFRTYKKVLSGIDEAMEV 65

Query: 76  ALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             ++      +E +         + +   E  Q   L     D  +  +E+  GAGG E+
Sbjct: 66  IEDKSMDEEFREMAQEELKDLKPQKEELEEKLQVLLLPKDPNDDKNIIIEIRGGAGGDEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMYT++AE + ++ E ++ ++ E  G K     + G N Y  +K E GVHR+
Sbjct: 126 ALFAGDLFRMYTKYAESQGWRCEIIDANEPELGGFKEVIFSVDGENVYSKMKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS  ++ V P   + ++IE++E D +IDTYRASGAGGQH+N T+SAV
Sbjct: 186 QRVPATETQGRVHTSTVTVAVLP-EMEDVDIEVNEKDLKIDTYRASGAGGQHINKTESAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+P+G+VV CQ +RSQ +N+ +A  +LRAKL +    ++E I+++    K+++G G 
Sbjct: 245 RITHLPSGIVVACQDQRSQLQNREKAMRVLRAKLQD--QAEQEAISSMAADRKSQVGTGD 302

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       +L+GDLD+ ++A  A  +
Sbjct: 303 RSERIRTYNY-PQGRVTDHRINLTLYKLDAILNGDLDEIIQALNAADQ 349


>gi|221632126|ref|YP_002521347.1| peptide chain release factor 1 [Thermomicrobium roseum DSM 5159]
 gi|221155596|gb|ACM04723.1| peptide chain release factor 1 [Thermomicrobium roseum DSM 5159]
          Length = 363

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 120/350 (34%), Positives = 184/350 (52%), Gaps = 11/350 (3%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLC 67
            + D      QR   +  +  DP +  +      L RER  L+  ++  ++++D   ++ 
Sbjct: 7   SVLDKLAELEQRFDEVERQLADPDVATDPQRVAQLARERAELEEIVALYRQLKDIDRQVA 66

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
               LLE    +      +E     +  +   +  +   +     D  D  +E+ AG GG
Sbjct: 67  QAEELLEAEDPDLVELAAEEIDRLREYRETIYQELRRRLVPRDPNDEKDVIVEIRAGTGG 126

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE++ +K E L     E  G K     ++G  AY   K E GV
Sbjct: 127 EEAALFAADLFRMYTRYAERQGWKVEVLSSSPTELGGFKEIIFEVRGKGAYSHFKHESGV 186

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS +++ V P   D +E+ I E D RI+ +R+SG GGQ VNTTD
Sbjct: 187 HRVQRVPITESSGRIHTSTATVAVLP-EADEVEVHIDEDDLRIEVFRSSGHGGQSVNTTD 245

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VV CQ ERSQ KN+ +A  +LRA+LYEL+ +K EE        + ++G
Sbjct: 246 SAVRITHLPTGIVVSCQDERSQLKNRLKAMAVLRARLYELQRRKLEEERTGL--RRQQVG 303

Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            G +   IR+Y   P   V D R  +   +   VLDG++D F++   A++
Sbjct: 304 TGERAEKIRTYNF-PQDRVTDHRLKLTVNNLPAVLDGEIDIFIQELQALE 352


>gi|328950071|ref|YP_004367406.1| Peptide chain release factor 1 [Marinithermus hydrothermalis DSM
           14884]
 gi|328450395|gb|AEB11296.1| Peptide chain release factor 1 [Marinithermus hydrothermalis DSM
           14884]
          Length = 369

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 106/344 (30%), Positives = 163/344 (47%), Gaps = 8/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                     L  +  DP +  +    + L R    L   +   +E    L D      L
Sbjct: 15  LKQLETEYQALEAQLGDPGVLADPKRYRELSRRYAELGEIVRVYREYTKTLDDLEQAQAL 74

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   +   E      R        +   L     D+ +A +E+ AG GG E+  +A
Sbjct: 75  LDDPELGEMARAEKETLEARRDELERELELLLLPKDPVDAKNAIVEIRAGTGGEEAALFA 134

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L  MY R+AE+  +  E L+ H  +  G       + G  AYG  K E GVHR+ R+ 
Sbjct: 135 GDLYNMYVRYAERLGYTVEVLDSHPTDLGGFSKVVFQVNGSGAYGVFKYESGVHRVQRVP 194

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P  +++   E+  S+ RID  RASG GGQ VNTTDSAVR+ H
Sbjct: 195 ATETQGRIHTSTATVAVLPEAEEAD-FELDMSEIRIDVQRASGPGGQGVNTTDSAVRVVH 253

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           +PTG++V CQ  RSQ KN+ +A  +LR++L  LE+++ EE A +  +   +IG G +   
Sbjct: 254 LPTGIIVTCQDSRSQIKNREKALTILRSRL--LEMKRAEEEAKLRRTRLAQIGTGERSEK 311

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R +    +   VL G+L++   A     +
Sbjct: 312 IRTYNF-PQSRVTDHRIHYTTHNLEGVLAGELEELTNALKKADQ 354


>gi|292488088|ref|YP_003530965.1| peptide chain release factor 1 [Erwinia amylovora CFBP1430]
 gi|292899299|ref|YP_003538668.1| peptide chain release factor 1 (RF-1) [Erwinia amylovora ATCC
           49946]
 gi|291199147|emb|CBJ46261.1| peptide chain release factor 1 (RF-1) [Erwinia amylovora ATCC
           49946]
 gi|291553512|emb|CBA20557.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora CFBP1430]
 gi|312172219|emb|CBX80476.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora ATCC
           BAA-2158]
          Length = 360

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 111/337 (32%), Positives = 174/337 (51%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     ++ Q    D      +
Sbjct: 9   LEALQERHEEVEAMLGDAGVIADQERFRALSREYAQLTDVSQCFRQWQQCQEDIAAAEMM 68

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   +   E        +   +  Q   L     D  + YLEV AG GG E+  +A
Sbjct: 69  LGDAEMREMAQDELQAARATCEDLEQQLQVLLLPKDPDDERNCYLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R++K E +  ++GE  G K     + G  AYG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESRRWKVEVMSANEGEHGGYKEVIAKVIGEGAYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +I+ SD +IDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A  +L +++   E+ +R++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARRQQE--ESSTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      + ++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTIYRLDEAMEGKLDALIE 342


>gi|18311184|ref|NP_563118.1| peptide chain release factor 1 [Clostridium perfringens str. 13]
 gi|110799590|ref|YP_696880.1| peptide chain release factor 1 [Clostridium perfringens ATCC 13124]
 gi|110802815|ref|YP_699476.1| peptide chain release factor 1 [Clostridium perfringens SM101]
 gi|168205561|ref|ZP_02631566.1| peptide chain release factor 1 [Clostridium perfringens E str.
           JGS1987]
 gi|168210131|ref|ZP_02635756.1| peptide chain release factor 1 [Clostridium perfringens B str. ATCC
           3626]
 gi|168213694|ref|ZP_02639319.1| peptide chain release factor 1 [Clostridium perfringens CPE str.
           F4969]
 gi|168215831|ref|ZP_02641456.1| peptide chain release factor 1 [Clostridium perfringens NCTC 8239]
 gi|169344167|ref|ZP_02865149.1| peptide chain release factor 1 [Clostridium perfringens C str.
           JGS1495]
 gi|182624062|ref|ZP_02951850.1| peptide chain release factor 1 [Clostridium perfringens D str.
           JGS1721]
 gi|20139327|sp|Q8XIB9|RF1_CLOPE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361525|sp|Q0TNB0|RF1_CLOP1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361526|sp|Q0SQY1|RF1_CLOPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|18145867|dbj|BAB81908.1| peptide chain release factor 1 [Clostridium perfringens str. 13]
 gi|110674237|gb|ABG83224.1| peptide chain release factor 1 [Clostridium perfringens ATCC 13124]
 gi|110683316|gb|ABG86686.1| peptide chain release factor 1 [Clostridium perfringens SM101]
 gi|169297625|gb|EDS79725.1| peptide chain release factor 1 [Clostridium perfringens C str.
           JGS1495]
 gi|170662868|gb|EDT15551.1| peptide chain release factor 1 [Clostridium perfringens E str.
           JGS1987]
 gi|170711762|gb|EDT23944.1| peptide chain release factor 1 [Clostridium perfringens B str. ATCC
           3626]
 gi|170714864|gb|EDT27046.1| peptide chain release factor 1 [Clostridium perfringens CPE str.
           F4969]
 gi|177910955|gb|EDT73309.1| peptide chain release factor 1 [Clostridium perfringens D str.
           JGS1721]
 gi|182382220|gb|EDT79699.1| peptide chain release factor 1 [Clostridium perfringens NCTC 8239]
          Length = 360

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 124/351 (35%), Positives = 192/351 (54%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  +    +   L+ K  DP +  N  E + L +E   L+  ++  KE ++   +   
Sbjct: 2   ILDRLNFIENKYDELSVKISDPSIMANQKEWRKLCKEHADLEVIVNKYKEYKEATEELEA 61

Query: 72  LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             E+  EE D  + +  +       +R K   +  Q   L     D  + ++E+  GAGG
Sbjct: 62  NKEMLSEESDQEMREMINSEIKDLTERKKELEDEIQILLLPKDPNDDKNVFVEIRGGAGG 121

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYT++AEK ++K E +  ++ +  G K    +IKG  AY  LK E G 
Sbjct: 122 DEAALFAANLFRMYTKYAEKNRWKVELMSANETDIGGFKEVVFMIKGAGAYSKLKYESGA 181

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS +++ V P   D +EIEI++ D +ID +RASG GGQ VNTTD
Sbjct: 182 HRVQRVPDTESSGRIHTSTATVAVLP-EVDDVEIEINDKDIKIDVFRASGNGGQCVNTTD 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+P+G+VV CQ E+SQ KNK +A  +LRA+L+  E  + E +A I E  K+++G
Sbjct: 241 SAVRITHLPSGLVVSCQDEKSQLKNKEKAMKVLRARLF--EQAEAERLAGIAEDRKSQVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R N+        L+GD+D+ + A +   +
Sbjct: 299 TGDRSERIRTYNY-PQGRVTDHRINMTLYKLDSFLEGDIDEILNALITEDQ 348


>gi|182415309|ref|YP_001820375.1| peptide chain release factor 1 [Opitutus terrae PB90-1]
 gi|177842523|gb|ACB76775.1| peptide chain release factor 1 [Opitutus terrae PB90-1]
          Length = 383

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 107/348 (30%), Positives = 170/348 (48%), Gaps = 12/348 (3%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D     +RL  L+ +  +P  + N   A  + RE+Q L   ++  +E      +      
Sbjct: 14  DLAPFQRRLDELDAQMAEPTFYANARRAAEVSREQQKLQQLVADYQEYDRLGREAAEAAA 73

Query: 75  LALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           L  +      L+E +               +      +     DS +  +E+ AG GG E
Sbjct: 74  LGKDPAADPDLRELAQAELPELERRRAALRQAVLLAMIPPDPTDSRNTVMEIRAGTGGDE 133

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY+R+A+ + +K + +     E  G K    LI G + Y  LK E GVHR
Sbjct: 134 ASLFAADLFRMYSRYADGQGWKIQPMSSSMSERGGFKEVIFLISGTDVYKRLKFESGVHR 193

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++N R HTS  ++ V P   + ++++I   +  I   RASG GGQ VNTTDSA
Sbjct: 194 VQRVPVTEANGRIHTSTVTVAVLP-EAEEVDVQIDPQELEITVTRASGPGGQGVNTTDSA 252

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           V+I H PTG++V C  ERSQ KNKA+A  +LR++L  L+ ++ EE A    + +++IG G
Sbjct: 253 VQIVHKPTGLIVTCADERSQIKNKAKALTVLRSRL--LQRREEEERAKYAATRRSQIGSG 310

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               +IR+Y   P   + D R  +   +   VL+G +D  + A     
Sbjct: 311 DRSERIRTYNF-PQNRLTDHRIGLTLYNLPQVLEGGIDPIIAALHKAD 357


>gi|116333899|ref|YP_795426.1| peptide chain release factor 1 [Lactobacillus brevis ATCC 367]
 gi|122269414|sp|Q03QX7|RF1_LACBA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116099246|gb|ABJ64395.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
           brevis ATCC 367]
          Length = 361

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 110/351 (31%), Positives = 181/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68
           +FD       R   LN    DP +  +      L +E   L   +    + Q    ++ D
Sbjct: 4   MFDKLQAVADRYDELNELISDPEVIADTQRFMALSKEEGELRETVDKYHQYQDVTQQIAD 63

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           +  +L   L+ D  S++++    L   K    E  +   L     D  +  +E+H  AGG
Sbjct: 64  DDEMLHDKLDADMESMIKDELKELTAQKAALEEDIKVLLLPKDPNDDKNIIMEIHGAAGG 123

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L  MY+++AE++ ++ E ++ +  E  G K   ++I G   Y  LK E G 
Sbjct: 124 DEASLFAADLFSMYSKYAERQGWQIEVVDENATEVGGFKEIVMMITGNKVYSKLKYENGA 183

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P  ++ ++I+I   D R D YR+SGAGGQH+N T 
Sbjct: 184 HRVQRVPVTESAGRVHTSTATVGVMP-EEEDVDIDIDPKDIRTDVYRSSGAGGQHINKTS 242

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +LRA++Y+    K++E +      K+ +G
Sbjct: 243 SAVRMTHLPTGIVVAMQDERSQQQNRAKAMQILRARVYDYY--KQQEESAYNAERKSAVG 300

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G+LDD + A +   +
Sbjct: 301 TGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDDIIDALIVSDQ 350


>gi|237793457|ref|YP_002861009.1| peptide chain release factor 1 [Clostridium botulinum Ba4 str. 657]
 gi|259585216|sp|C3KYH5|RF1_CLOB6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229260673|gb|ACQ51706.1| peptide chain release factor 1 [Clostridium botulinum Ba4 str. 657]
          Length = 358

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 126/347 (36%), Positives = 195/347 (56%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    +   L+ K  DP +  N  E + L +E   L+  ++  +E +    D     E+
Sbjct: 5   LNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLESDKEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  + +   + ++ + L++E  +       L     D  D ++E+ AGAGG E+ 
Sbjct: 65  LKEESDKDLREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A+ LLRMYTR+AE++ +K E + ++  +  G K  T+ IKG  AY  LK E GVHR+ 
Sbjct: 125 LFASNLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAIKGKGAYSRLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P   D ++I I+ +D RID YRASG GGQ VNTTDSAVR
Sbjct: 185 RVPDTESSGRIHTSTATVAVLP-EVDDVDININANDLRIDVYRASGHGGQCVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ E+SQ KNK +A  +L+A+L+E      E  A+I E  K+++G G  
Sbjct: 244 ITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAE--AERAASIAEDRKSQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R  +        LDGD+D+ ++A +   +
Sbjct: 302 SERIRTYNY-PQGRITDHRIGLTLYKLETFLDGDIDEVIEALVTEDQ 347


>gi|226953405|ref|ZP_03823869.1| peptide chain release factor 2 [Acinetobacter sp. ATCC 27244]
 gi|294651888|ref|ZP_06729178.1| peptide chain release factor RF2 [Acinetobacter haemolyticus ATCC
           19194]
 gi|226835836|gb|EEH68219.1| peptide chain release factor 2 [Acinetobacter sp. ATCC 27244]
 gi|292822211|gb|EFF81124.1| peptide chain release factor RF2 [Acinetobacter haemolyticus ATCC
           19194]
          Length = 297

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 161/295 (54%), Positives = 211/295 (71%), Gaps = 1/295 (0%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
              + ++L D   +L+LA+E DD S+L +    L   +  +   +F  + S   D N  +
Sbjct: 2   FDRLAEQLDDAKAMLDLAVEADDESLLLDVQAELDSAEQALGNLEFRRMFSNPMDPNPCF 61

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           LE+ +G+GGTE+QDWA+MLLRMY RW E+  FK E +E+ DG+ AGIKSAT+ + G  AY
Sbjct: 62  LEIQSGSGGTEAQDWASMLLRMYLRWIERHGFKAELMEVSDGDVAGIKSATIRVDGEFAY 121

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           GWL+ E GVHRLVR SP+DSN+ RHTSFS++++ P +DD+IEI+I+ SD R DTYRASGA
Sbjct: 122 GWLRTESGVHRLVRKSPFDSNNNRHTSFSAVFISPEIDDNIEIDINPSDVRTDTYRASGA 181

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQH+N TDSAVR+TH PTG+VV CQ +RSQH N+  AW  LRAKLYELE+ KR E A  
Sbjct: 182 GGQHINKTDSAVRLTHAPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMSKRNEAAQA 241

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            E SK++IGWG QIRSYVL     +KDLRT +E ++   VLDGDLD F++A+L  
Sbjct: 242 LEDSKSDIGWGSQIRSYVLDD-SRIKDLRTGVENSNTKAVLDGDLDKFIEASLKQ 295


>gi|224368815|ref|YP_002602976.1| PrfA [Desulfobacterium autotrophicum HRM2]
 gi|223691531|gb|ACN14814.1| PrfA [Desulfobacterium autotrophicum HRM2]
          Length = 391

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 105/356 (29%), Positives = 170/356 (47%), Gaps = 16/356 (4%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           + L   +N L G+       +R   L     DP +  + ++ +  ++E   L   +S   
Sbjct: 33  LDLQNMINKLQGI------KERYIKLENLLSDPAVIADQVKYQRCLKEHGELTKVVSAFA 86

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETS---DNLQRIKLEVEYKQFESLLSGEADSNDA 117
           + Q  L       +LA + D            D   + +      +   +     D  + 
Sbjct: 87  DYQAVLQQMGEAKDLAKDPDPDIREMAKEETADLRAQREGLESKLKLLLMPKDPRDDKNV 146

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            LE+ AG GG E+  +A  L RMY+R+AE + +    +E       G K    +IKG  A
Sbjct: 147 ILEIRAGTGGEEAGLFAADLFRMYSRYAEIKGWTVNVIESSHSSAGGFKEVISMIKGNGA 206

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           +   K E G HR+ R+   ++  R HTS  ++ V P   + +E++I  S+ ++D +RASG
Sbjct: 207 FSAFKYESGTHRVQRVPETETQGRVHTSAVTVAVLP-EAEDVELKIEPSELKVDVFRASG 265

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQ VNTTDSAVRITH+PTG+V  CQ E+SQ KNK  A  +L+A++ +  +  RE+ A 
Sbjct: 266 PGGQSVNTTDSAVRITHLPTGIVATCQDEKSQIKNKIAALKVLKARILDAMV--REQEAK 323

Query: 298 IGESSKTEIGWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
                K ++G G    +IR+Y   P   + D R  +      +++ GD+ D +   
Sbjct: 324 RAAQRKGQVGTGDRSGRIRTYNF-PQGRMTDHRIGLTLYRLDNIMGGDIQDIIDEL 378


>gi|167769908|ref|ZP_02441961.1| hypothetical protein ANACOL_01249 [Anaerotruncus colihominis DSM
           17241]
 gi|167667899|gb|EDS12029.1| hypothetical protein ANACOL_01249 [Anaerotruncus colihominis DSM
           17241]
          Length = 358

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 108/352 (30%), Positives = 175/352 (49%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D+   R   ++ +  +P +  +  +   LM+E   L   +   +  +        
Sbjct: 1   MFDKLDSVAARYEEISRRLMEPDVTGDPEQYASLMKEYSRLTPIVEKYRAYRTAKDACDE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIK-----LEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
             E+  E      ++E +               +  +   L     D  +  +E+  GAG
Sbjct: 61  AREVLDESGVDREMRELAQEQLDENRAVLDQTAQELKILLLPRDPNDDKNVIVEIRGGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A +L RMYT +AE   ++ E +  ++ E  G K     I G  AY  LK E G
Sbjct: 121 GEEAALFAGVLYRMYTMYAEGLGWQCEVISANETELGGYKEICFSITGEGAYSRLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS  ++ V P   + +E E+   D +ID +R+SGAGGQHVN T
Sbjct: 181 VHRVQRVPETETQGRIHTSTVTVAVLP-EAEEVEFELDPRDLQIDVFRSSGAGGQHVNKT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SA+R+TH+PTG+VV+CQ ERSQ+KNK +A  +LRA+L ++++  RE+   I    + ++
Sbjct: 240 SSAIRVTHLPTGMVVECQDERSQYKNKDRALKVLRARLLDIKV--REQNDKIATERRLQV 297

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       VL+GDL +   A +   +
Sbjct: 298 GTGDRSERIRTYNY-PQGRVTDHRIGLTLYKLDSVLNGDLAELFDALMTFDQ 348


>gi|229551967|ref|ZP_04440692.1| peptide chain release factor RF1 [Lactobacillus rhamnosus LMS2-1]
 gi|229314702|gb|EEN80675.1| peptide chain release factor RF1 [Lactobacillus rhamnosus LMS2-1]
          Length = 386

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 108/352 (30%), Positives = 178/352 (50%), Gaps = 12/352 (3%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            +F+  D  + R   L     DP +  +      L +E   + + ++  K+ +  L D  
Sbjct: 30  KIFEQLDGLLVRYEELEELMSDPEVISDTKRYLALSKEEGGMRDVVAAYKKYKQVLSDIK 89

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAG 126
              E+  E  D  +     ++L+ ++ +    +       L     D  +  +E+   AG
Sbjct: 90  ESEEVLRESKDEDMEALAKEDLEDLQKQKADLEEKIKVLMLPKDPNDDKNIIMEIRGAAG 149

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  LL MY  +AE++ +K E ++    E  G K   ++I G N Y  LK E G
Sbjct: 150 GDEASLFAGDLLNMYMHYAERQGWKAEIVDSTPTEVGGYKEVVVMITGDNVYSKLKYENG 209

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P   D ++++I   D R D YR+SGAGGQHVN T
Sbjct: 210 AHRVQRVPVTESAGRVHTSTATVGVMP-EYDEVDLKIDPKDIRTDVYRSSGAGGQHVNKT 268

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+THIPTG+VV  Q ERSQ +N+A+A  +LR+++Y+    + +E     ++ K  I
Sbjct: 269 SSAVRMTHIPTGIVVSMQDERSQQENRARAMQILRSRVYDYYETENQE--KYDQNRKNAI 326

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       +++G+LD+ + A +   +
Sbjct: 327 GTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIVHDQ 377


>gi|304383714|ref|ZP_07366173.1| peptide chain release factor RF2 [Prevotella marshii DSM 16973]
 gi|304335238|gb|EFM01509.1| peptide chain release factor RF2 [Prevotella marshii DSM 16973]
          Length = 374

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 120/359 (33%), Positives = 203/359 (56%), Gaps = 12/359 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    + D           +T+ P  W++   A+  M++ + +   +    E+
Sbjct: 10  VQERAEALFRYLEIDKKQIEYEEEELRTQAPDFWEDTARAQEQMKKVKGIKRWLDGYAEV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +     D+    +E  D+ ++    +E  +  ++L  + D     L+++
Sbjct: 70  RTLTDELQLAFDFY--HDEMVTEEEVEDDYRKAVKAIENLELMNMLRQKEDPMGCVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PNAYGWL 181
           +GAGGTESQDWA ML+RMY RWAE   ++     + +G+EAGIKS T+ I+G   AYG+L
Sbjct: 128 SGAGGTESQDWAQMLMRMYVRWAEAHGYRCTISNLQEGDEAGIKSVTMEIEGGEYAYGYL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SP+++  +R TSF+S++V P+VDD+IE+ +  +    D +R+ GAGGQ
Sbjct: 188 KSENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDTIEVYVDPAKVSWDLFRSGGAGGQ 247

Query: 242 HVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  ++ VR+ +  T         ++++  + R Q +N+  A  +L+++LY+  ++KR 
Sbjct: 248 NVNKVETGVRLRYQYTDPDTGEEEEILIENTESRKQLENRNNAMRLLKSQLYDRAMKKRL 307

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           E     E+ K +I WG QIRSYV    + VKD RTN + T    V+DG +D+F+KA L 
Sbjct: 308 EAQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTTDVDGVMDGKIDEFIKAYLM 365


>gi|269798159|ref|YP_003312059.1| peptide chain release factor 1 [Veillonella parvula DSM 2008]
 gi|269094788|gb|ACZ24779.1| peptide chain release factor 1 [Veillonella parvula DSM 2008]
          Length = 360

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 110/348 (31%), Positives = 182/348 (52%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 +   L  +  DP +     E + L R+   L   +   +  +  L      +E+
Sbjct: 6   LQVIEDKFMDLEQRISDPEVIARQDEWRKLTRQHAQLSETVETFRTYKKVLSGIDEAMEV 65

Query: 76  ALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             ++      +E +         + +   E  Q   L     D  +  +E+  GAGG E+
Sbjct: 66  IEDKSMDEEFREMAQEELKELKPQKEELEEKLQVLLLPKDPNDDKNIIIEIRGGAGGDEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMYT++AE + ++ E ++ ++ E  G K     + G N Y  +K E GVHR+
Sbjct: 126 ALFAGDLFRMYTKYAESQGWRCEIIDANEPELGGFKEVIFSVDGENVYSKMKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS  ++ V P   + ++IE++E D +IDTYRASGAGGQH+N T+SAV
Sbjct: 186 QRVPATETQGRVHTSTVTVAVLP-EMEDVDIEVNEKDLKIDTYRASGAGGQHINKTESAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+P+G+VV CQ +RSQ +N+ +A  +LRAKL +    ++E I+++    K+++G G 
Sbjct: 245 RITHLPSGIVVACQDQRSQLQNREKAMRVLRAKLQD--QAEQEAISSMAADRKSQVGTGD 302

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       +L+GDLD+ ++A  A  +
Sbjct: 303 RSERIRTYNY-PQGRVTDHRINLTLYKLDAILNGDLDEIIQALNAADQ 349


>gi|119897272|ref|YP_932485.1| peptide chain release factor 1 [Azoarcus sp. BH72]
 gi|166223529|sp|A1K443|RF1_AZOSB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119669685|emb|CAL93598.1| peptide chain release factor [Azoarcus sp. BH72]
          Length = 361

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 184/344 (53%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   RL+ L+ +       +++   + L RER  L+  ++     +    D     EL
Sbjct: 9   LEHLAGRLAELDRELSSEDATRDMNAFRDLSRERAELEPVVALYGAYRQAEQDCATAREL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +   +  +          Q   L     D  + +LE+ AG GG E+  +A
Sbjct: 69  LDDPEMQELGRSELEAGEARIAALDGDLQRALLPRDPNDERNLFLEIRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+AE+++++ E +  +  +  G K     I G  AY  LK E G HR+ RI 
Sbjct: 129 GDLLRMYSRYAERQRWRVEIVSSNPSDLGGYKEVIARIVGAGAYSRLKFESGGHRVQRIP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+   +EI+ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 VTETQGRIHTSACTVAVMPEADELAAVEINPADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQH+NKAQA  +L A+L + +L+ R+  +    + ++ IG G    +
Sbjct: 249 LPTGLVVECQDDRSQHRNKAQAMAVLAARLNDAQLRARQ--SAEAATRRSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       V+ G+LD+ + A +   +
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKLDAVMQGELDELLAALVLEHQ 349


>gi|148549433|ref|YP_001269535.1| peptide chain release factor 2 [Pseudomonas putida F1]
 gi|148513491|gb|ABQ80351.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudomonas
           putida F1]
          Length = 304

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 166/302 (54%), Positives = 219/302 (72%), Gaps = 1/302 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L   +  + ++   L D   LL++A+EE+D + + +    L+ ++  +   +F  + SGE
Sbjct: 2   LAQVVETLDKLSGGLADCKDLLDMAVEENDENAVSDVVTELEGLEENLAQLEFRRMFSGE 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+ +GE AGIK AT+ 
Sbjct: 62  MDMNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVH 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EI+I+ SD RID
Sbjct: 122 IKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIDINPSDLRID 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QK
Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R   +   E SK++IGWG QIRSYVL     +KDLRT +E++    VLDGDLD +++A+L
Sbjct: 242 RNAASQALEDSKSDIGWGHQIRSYVLDD-SRIKDLRTGVERSDCQKVLDGDLDQYLEASL 300

Query: 352 AI 353
             
Sbjct: 301 KQ 302


>gi|322514782|ref|ZP_08067805.1| peptide chain release factor RF2 [Actinobacillus ureae ATCC 25976]
 gi|322119244|gb|EFX91374.1| peptide chain release factor RF2 [Actinobacillus ureae ATCC 25976]
          Length = 301

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 157/299 (52%), Positives = 213/299 (71%), Gaps = 1/299 (0%)

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
            ++ I+ +   + D   L+ELA+E +D     E       ++ ++   +F+ + SG+ D+
Sbjct: 2   VVNTIRALAQGVEDVEGLIELAVEAEDEDTFNEAQAEANELEEKLAKLEFQRMFSGQHDA 61

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
            D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G
Sbjct: 62  ADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITG 121

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YR
Sbjct: 122 EYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYR 181

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASGAGGQHVN T+SAVRITHIP+G+VVQCQ  RSQH+NK Q    L+AKLYE+E+ K+  
Sbjct: 182 ASGAGGQHVNKTESAVRITHIPSGIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNA 241

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
                E SK++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 242 EKQAMEESKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKFIEASLKA 299


>gi|300723054|ref|YP_003712352.1| peptide chain release factor RF-1 [Xenorhabdus nematophila ATCC
           19061]
 gi|297629569|emb|CBJ90172.1| peptide chain release factor RF-1 [Xenorhabdus nematophila ATCC
           19061]
          Length = 360

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 178/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L +E   L +  +  K  +    D      +
Sbjct: 9   LEALQERHEEVLAHLGDAEVIADQERFRALSKEYAQLTDVTNCFKAWKSVQDDLETAEMM 68

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   +   E  D   R +   +  Q   L     D  + +LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQAELKDAKIRNEELEQQLQVLLLPKDPDDERNCFLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +  ++GE  G K     + G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESRRWRVEIMSANEGEHGGYKEVIAKVSGEQVYGHLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P V ++   EI+  D +IDTYR+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAILPEVPEAELPEINPGDLKIDTYRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++   E++KR+E        +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMRKRQE--AEASERRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            R+Y   P   V D R N+      ++++G LD  ++  +   +
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLEEIMEGKLDMLIQPIITEYQ 349


>gi|253990004|ref|YP_003041360.1| peptide chain release factor 1 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781454|emb|CAQ84617.1| peptide chain release factor rf-1 [Photorhabdus asymbiotica]
          Length = 360

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 120/337 (35%), Positives = 178/337 (52%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +  +  K  +    D      +
Sbjct: 9   LEALQERHEEVLAHLGDADVIADQERFRALSREYAQLTDVTTCFKTWRTVQDDLKAAEMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE   +   R +   +  Q   L     D  + +LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQEEIKDAKARNEELEQQLQLLLLPKDPDDERNCFLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R++K E +  +DGE  G K     + G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESRRWKIEVMSANDGEHGGYKEIIAKVSGEQVYGHLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   EIS SD RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVLPEIPEAELPEISPSDLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ ERSQHKNKA+A ++L A++   E++KR+E        +  +G G    +
Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLAARIRAAEVRKRQE--AEASERRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQ 342


>gi|149927857|ref|ZP_01916108.1| peptide chain release factor 2 [Limnobacter sp. MED105]
 gi|149823479|gb|EDM82710.1| peptide chain release factor 2 [Limnobacter sp. MED105]
          Length = 304

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 156/302 (51%), Positives = 214/302 (70%), Gaps = 1/302 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           LD  +  +  +Q  + D+  L+E+A  E D   L+     +   +  +   +F  + S  
Sbjct: 2   LDGVVVTMNTVQSNISDSKELVEMAEAEGDFDTLEAIESEVAEYEKVIADLEFRRMFSNP 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD  + ++++ AGAGGTE+QDWA++LLR Y R+ E++ FK E +E  DGE AGIKSAT+ 
Sbjct: 62  ADPANCFIDITAGAGGTEAQDWASILLRQYLRYCERKGFKVEVMEQSDGEVAGIKSATIK 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           ++G  A+G+L+ E GVHRLVR SP+DS+  RHTSF+S++VYP VDDS EIEI+ +D R D
Sbjct: 122 VEGEYAFGYLRTETGVHRLVRKSPFDSSGGRHTSFASLFVYPEVDDSFEIEINPADVRTD 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYRASGAGGQH+N TDSAVR+THIPTG+VVQCQ +RSQH+N+ +AW ML+AKLYE E++K
Sbjct: 182 TYRASGAGGQHINKTDSAVRLTHIPTGIVVQCQNDRSQHRNRDEAWGMLKAKLYEFEMRK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R       E +KT++GWG QIRSYVL     +KDLRT +E ++   VLDGDLD F++A+L
Sbjct: 242 RMAEQQALEDTKTDVGWGHQIRSYVLD-NSRIKDLRTGVEISNTQRVLDGDLDPFIEASL 300

Query: 352 AI 353
             
Sbjct: 301 KQ 302


>gi|302380176|ref|ZP_07268648.1| peptide chain release factor 1 [Finegoldia magna ACS-171-V-Col3]
 gi|302311959|gb|EFK93968.1| peptide chain release factor 1 [Finegoldia magna ACS-171-V-Col3]
          Length = 355

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 116/351 (33%), Positives = 194/351 (55%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  D+ V +   L  K  DP +  ++     LM+E   L+  ++     +D L +   
Sbjct: 1   MFENLDSVVDKFKDLEVKVADPEVIADMENWTKLMKEHADLEPVVNKYLSYKDNLKNLEE 60

Query: 72  LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             EL     D  + +   D      ++I+ + E  +   L     D  + ++E+ AGAGG
Sbjct: 61  DKELLGTTGDSEMEELLKDEISTLEEQIEKDQEELKILLLPKDPNDEKNVFIEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  LLRMY  +++K+ + TE ++I      GIK   +++KG  AY  LK E GV
Sbjct: 121 DEAGLFAGELLRMYQMYSDKKHWTTEIMDIQQQGVGGIKEVVMMVKGKGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS +++ V P   + ++++I + D RID +RASG GGQ VNTTD
Sbjct: 181 HRVQRVPQTESSGRIHTSTATVAVLP-EAEDVDVKIEQKDLRIDVFRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG+VV CQ E+SQ KNK +A  +L+++L++L  +++    +  ++ K+++G
Sbjct: 240 SAVRITHIPTGLVVTCQDEKSQIKNKDKAMKVLKSRLFDLMEEEKN--KDRADARKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   + D R N       + LDGD+++ +    +  +
Sbjct: 298 TGDRSERIRTYNF-PQGRITDHRINKTIFQLQNFLDGDIEEMIDDLTSYDQ 347


>gi|89094907|ref|ZP_01167839.1| peptide chain release factor 1 [Oceanospirillum sp. MED92]
 gi|89080864|gb|EAR60104.1| peptide chain release factor 1 [Oceanospirillum sp. MED92]
          Length = 362

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 175/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   L     DP +  +  + +    E   L+  +   +       D      +
Sbjct: 9   LEKLSDRYEELAALLSDPEVISDQEKFREYSMEYSELEPVVKAFEAYTQAQEDLEEAEMM 68

Query: 76  ALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +      RI+      Q   L     DS + +LEV AG GG E+  
Sbjct: 69  MADSDPDMREMAKEEYPEVKARIESLEGELQILLLPKDPNDSRNVFLEVRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE + ++ E +  ++GE  G K     I G N Y  LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAEVQGWRVEVVSANEGEHGGYKEIISRIVGTNVYSQLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ +   +D+S EIEI+++D RIDT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVAIMAEMDESAEIEINKADLRIDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTGVVV+CQ+ERSQHKN+A+A ++L ++L   E     + A +  + K+ +G G   
Sbjct: 249 THIPTGVVVECQEERSQHKNRAKAMSLLASRLQAAEE--ERQAAELASTRKSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            +IR+Y   P   V D R N+      +V+ G+L   ++  
Sbjct: 307 ERIRTYNY-PQGRVTDHRINLTLYKLQEVISGELQHVVEPL 346


>gi|256023112|ref|ZP_05436977.1| peptide chain release factor 1 [Escherichia sp. 4_1_40B]
          Length = 360

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 114/344 (33%), Positives = 179/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+      ++ +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            R+Y   P   V D R N+      +V++G LD  ++  +   +
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIREHQ 349


>gi|153939567|ref|YP_001389502.1| peptide chain release factor 1 [Clostridium botulinum F str.
           Langeland]
 gi|168182252|ref|ZP_02616916.1| peptide chain release factor 1 [Clostridium botulinum Bf]
 gi|170755459|ref|YP_001779766.1| peptide chain release factor 1 [Clostridium botulinum B1 str. Okra]
 gi|166223550|sp|A7G9P2|RF1_CLOBL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229576659|sp|B1IE21|RF1_CLOBK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|152935463|gb|ABS40961.1| peptide chain release factor 1 [Clostridium botulinum F str.
           Langeland]
 gi|169120671|gb|ACA44507.1| peptide chain release factor 1 [Clostridium botulinum B1 str. Okra]
 gi|182674565|gb|EDT86526.1| peptide chain release factor 1 [Clostridium botulinum Bf]
 gi|295317603|gb|ADF97980.1| peptide chain release factor 1 [Clostridium botulinum F str.
           230613]
 gi|322804409|emb|CBZ01959.1| peptide chain release factor 1 [Clostridium botulinum H04402 065]
          Length = 358

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 126/347 (36%), Positives = 195/347 (56%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    +   L+ K  DP +  N  E + L +E   L+  ++  +E +    D     E+
Sbjct: 5   LNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLESDKEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  + +   + ++ + L++E  +       L     D  D ++E+ AGAGG E+ 
Sbjct: 65  LKEESDKELREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A+ LLRMYTR+AE++ +K E + ++  +  G K  T+ IKG  AY  LK E GVHR+ 
Sbjct: 125 LFASNLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAIKGKGAYSRLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P   D ++I I+ +D RID YRASG GGQ VNTTDSAVR
Sbjct: 185 RVPDTESSGRIHTSTATVAVLP-EVDDVDININANDLRIDVYRASGHGGQCVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ E+SQ KNK +A  +L+A+L+E      E  A+I E  K+++G G  
Sbjct: 244 ITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAE--AERAASIAEDRKSQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R  +        LDGD+D+ ++A +   +
Sbjct: 302 SERIRTYNY-PQGRITDHRIGLTLYKLETFLDGDIDEVIEALVTEDQ 347


>gi|83644616|ref|YP_433051.1| peptide chain release factor 2 [Hahella chejuensis KCTC 2396]
 gi|83632659|gb|ABC28626.1| peptide chain release factor 2 [Hahella chejuensis KCTC 2396]
          Length = 301

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 168/299 (56%), Positives = 221/299 (73%), Gaps = 1/299 (0%)

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
            +  + ++   L D   LL++A+EE D   + E    L+ I+ +VE  +F  + +GE D 
Sbjct: 2   VVKTVDDVTGGLTDCSDLLDMAVEEQDADAVTEVETELESIRAQVETLEFRRMFAGEMDP 61

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
           N+AYL++ AG+GGTE+QDWA++LLRMY RW E+R FKT+ +E   GE AGIKSAT+  +G
Sbjct: 62  NNAYLDIQAGSGGTEAQDWASILLRMYLRWGERRGFKTDLIEESPGEVAGIKSATIHFQG 121

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             AYGWL+ E GVHRLVR SP+DS +RRHTSF+S++V P VDD IEI+I+ +D RID YR
Sbjct: 122 EYAYGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVSPEVDDDIEIDINPADLRIDVYR 181

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASGAGGQHVN T+SAVRITH+P+G+V QCQ +RSQHKNK QA   L+AKLYELE+QKR  
Sbjct: 182 ASGAGGQHVNRTESAVRITHMPSGIVTQCQNDRSQHKNKDQAMKQLKAKLYELEIQKRNA 241

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            A   E SK++IGWG QIRSYVL     +KDLRT+IE ++   VLDGD+D+F++A+L  
Sbjct: 242 EAQQLEDSKSDIGWGSQIRSYVLD-QSRIKDLRTSIENSNCQAVLDGDIDEFIEASLKQ 299


>gi|108759492|ref|YP_633064.1| peptide chain release factor 1 [Myxococcus xanthus DK 1622]
 gi|20139339|sp|Q93NC7|RF1_MYXXA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361565|sp|Q1D2Q9|RF1_MYXXD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|14517940|gb|AAK64443.1|AF377339_4 peptide chain release factor RF-1 [Myxococcus xanthus]
 gi|108463372|gb|ABF88557.1| peptide chain release factor 1 [Myxococcus xanthus DK 1622]
          Length = 362

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 98/345 (28%), Positives = 176/345 (51%), Gaps = 11/345 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  ++  +R   L     +P +  +    + + +ER  L+  +   +  +  L D   
Sbjct: 1   MIDKLEDVERRFERLTADLSNPDVLADSARLQKVSKERAGLEKLVEAFRTYRKVLADLSE 60

Query: 72  LLELALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           +       D               ++        +   L     D  +  LE+ AGAGG 
Sbjct: 61  VEAWLGSSDADEKAFARESLPGLKEQRDELEASLKILLLPKDPNDEKNVILEIRAGAGGD 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  +++MY R+A++R +K + L++  G   G+K AT+ + G   +  +K E GVH
Sbjct: 121 EAALFAEEVMQMYLRYADRRGWKADILDMSPGNAGGVKDATVTLSGDAVFSSMKYESGVH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS  ++ V P   + ++++++ +D  +   R++G+GGQ VNTTDS
Sbjct: 181 RVQRVPATETQGRIHTSTITVSVMP-EAEDVDVQVNPADIEMQVMRSTGSGGQSVNTTDS 239

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+ H PTG+VV+CQQE+SQ KN+  A  MLRAKLY++E ++     +   + + ++G 
Sbjct: 240 AVRLIHHPTGIVVKCQQEKSQLKNRTMAMRMLRAKLYDIEQERIRNERD--SARRAQVGT 297

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G    +IR+Y   P   + D R  +   +   V+ GD++D + A 
Sbjct: 298 GDRSEKIRTYNF-PQDRLTDHRIGLTVHNLPGVMAGDVEDVITAC 341


>gi|294501881|ref|YP_003565581.1| peptide chain release factor 1 [Bacillus megaterium QM B1551]
 gi|294351818|gb|ADE72147.1| peptide chain release factor 1 [Bacillus megaterium QM B1551]
          Length = 355

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 108/351 (30%), Positives = 173/351 (49%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +    R   LN    DP +  N  + +   +E+  +   ++  +E +D       
Sbjct: 1   MFDRLEAVEARYEKLNELLSDPEIVNNPSKLREYSKEQSDIQQTVAAYQEYKDVKEQLSE 60

Query: 72  LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +  ++ D  +     +       + +  VE  +   +     D  +  +EV   AGG
Sbjct: 61  AKTMLEDKLDADMRDMVKEEIAELETQQEELVEKLRILLIPKDPNDDKNVIMEVRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE +E       G K    +I G  AY  +K E G 
Sbjct: 121 DEAALFAANLYRMYSRFAESQGWKTEVMEATTTGVGGYKEIIFMINGKGAYSKMKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P   + +E++I E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLP-EAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PT  VV CQ E+SQ KNK +A  +LRA++Y+    +RE  A    + K  +G
Sbjct: 240 SAVRLTHLPTNTVVSCQDEKSQIKNKEKAMKVLRARVYDKF--QREAQAEYDATRKQAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+G LD+ + A +   +
Sbjct: 298 SGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEIIDALVMEDQ 347


>gi|332663960|ref|YP_004446748.1| peptide chain release factor 1 [Haliscomenobacter hydrossis DSM
           1100]
 gi|332332774|gb|AEE49875.1| Peptide chain release factor 1 [Haliscomenobacter hydrossis DSM
           1100]
          Length = 358

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 104/341 (30%), Positives = 165/341 (48%), Gaps = 10/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72
            +    R   L  +  DP +  ++   K + +  + L   +      + +          
Sbjct: 5   LEAIYDRYLNLEEQMSDPDIIVDMDRYKKVSKNYKDLKPIVEAFLIYRNLVGNRDSAKQA 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L     E      +E      +I+   +  +F  +     DS D   E+ +G GG E+  
Sbjct: 65  LSDEDPEMREMAQEELESLNPQIEELEDKIKFLLIPKDPEDSRDVIFEIRSGTGGDEASL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMYTR+ E + +K  A+EI++G   G     L I G + YG LK E G HR+ R
Sbjct: 125 FAGDLYRMYTRYFESKGWKVSAMEINEGSVGGYNKLVLEINGEDVYGTLKFESGAHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P   +  ++EI + D + DT+R+SGAGGQHVN T+S VR 
Sbjct: 185 VPKTESQGRVHTSAATVVVMP-KLEMEDLEIRKEDLKTDTFRSSGAGGQHVNKTESGVRF 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311
           TH+PTGVV +    RSQ +N+  A   L  K+Y  E++++   +      K+ +G G + 
Sbjct: 244 THLPTGVVSESTDGRSQIQNREIALQRLYQKIY--EMRRQAHESEQAAKRKSLVGSGDRS 301

Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             IR+Y   P   V D R N+   S   VL+GDL+  ++  
Sbjct: 302 DKIRTYNF-PQNRVTDHRINLTIYSLDKVLEGDLEAIIEGL 341


>gi|168177471|ref|ZP_02612135.1| peptide chain release factor 1 [Clostridium botulinum NCTC 2916]
 gi|226947362|ref|YP_002802453.1| peptide chain release factor 1 [Clostridium botulinum A2 str.
           Kyoto]
 gi|254790873|sp|C1FQ97|RF1_CLOBJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|182670538|gb|EDT82512.1| peptide chain release factor 1 [Clostridium botulinum NCTC 2916]
 gi|226843349|gb|ACO86015.1| peptide chain release factor 1 [Clostridium botulinum A2 str.
           Kyoto]
          Length = 358

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 126/347 (36%), Positives = 194/347 (55%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    +   L+ K  DP +  N  E + L +E   L+  ++  +E +    D     E+
Sbjct: 5   LNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLESDKEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  + +   + ++ + L +E  +       L     D  D ++E+ AGAGG E+ 
Sbjct: 65  LKEESDKELREMAQEEIKELTLRLEDLERELTILLLPKDPNDDKDVFIEIRAGAGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A+ LLRMYTR+AE++ +K E + ++  +  G K  T+ IKG  AY  LK E GVHR+ 
Sbjct: 125 LFASNLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAIKGKGAYSRLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P   D ++I I+ +D RID YRASG GGQ VNTTDSAVR
Sbjct: 185 RVPDTESSGRIHTSTATVAVLP-EVDDVDININANDLRIDVYRASGHGGQCVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ E+SQ KNK +A  +L+A+L+E      E  A+I E  K+++G G  
Sbjct: 244 ITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAE--AERAASIAEDRKSQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R  +        LDGD+D+ ++A +   +
Sbjct: 302 SERIRTYNY-PQGRITDHRIGLTLYKLETFLDGDIDEVIEALVTEDQ 347


>gi|237744127|ref|ZP_04574608.1| peptide chain release factor 1 [Fusobacterium sp. 7_1]
 gi|256027764|ref|ZP_05441598.1| peptide chain release factor 1 [Fusobacterium sp. D11]
 gi|289765720|ref|ZP_06525098.1| bacterial Peptide Chain Release Factor 1 [Fusobacterium sp. D11]
 gi|229431356|gb|EEO41568.1| peptide chain release factor 1 [Fusobacterium sp. 7_1]
 gi|289717275|gb|EFD81287.1| bacterial Peptide Chain Release Factor 1 [Fusobacterium sp. D11]
          Length = 357

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 121/351 (34%), Positives = 183/351 (52%), Gaps = 11/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +  V R   LN     P +  +  +     +    +   +   KE +  + D   
Sbjct: 1   MFDKLEEVVARYDELNKMLVSPEILADSKKMIECNKALNEITEIVEKYKEYKKYVDDIEF 60

Query: 72  LLELALEEDDCSILQE----TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + E    E D  + +       +  +++    E  +   L   + D  +  +E+ AGAGG
Sbjct: 61  IKESFKTEKDPDMKEMLNEELKEAEEKLPKLEEELKILLLPKDKNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE++K+K E +E  DGE  GIK     I G  AY  LK E GV
Sbjct: 121 DEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELGGIKEIAFTIIGLGAYSRLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +++ R HTS +++ V P V+D  E+ +   D +IDTYR+ GAGGQHVN TD
Sbjct: 181 HRVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVTVDPKDLKIDTYRSGGAGGQHVNMTD 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VVQCQ ERSQ KN+ +A   L  KLYE+E +K+          + ++G
Sbjct: 241 SAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQRSEVE--SERRLQVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   + D R  +        LDGD+D+ + A +   +
Sbjct: 299 TGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQ 348


>gi|260655567|ref|ZP_05861055.1| peptide chain release factor 1 [Jonquetella anthropi E3_33 E1]
 gi|260630015|gb|EEX48209.1| peptide chain release factor 1 [Jonquetella anthropi E3_33 E1]
          Length = 361

 Score =  226 bits (576), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 122/361 (33%), Positives = 184/361 (50%), Gaps = 19/361 (5%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           +++ ++L             Q    +  K  DP +  NV E  +L ++   L   +   +
Sbjct: 4   VQIQKRLAE---------IEQAYREIEAKMGDPAVASNVKEMGVLGKKHADLQPVVELWQ 54

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDA 117
           E +           L   ED         +    ++R++        + L     D  D 
Sbjct: 55  EYRQVEAGLAEAKSLEDSEDAEMAELAKEEAASAVKRLEEIEAELHRQLLPKDPNDEKDV 114

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            +E+ AG GG E+  +A  L RMY+R+ E+  +++E +E ++ E  G K     +KG  A
Sbjct: 115 IVEIRAGTGGDEASLFAADLYRMYSRFVEREGWRSEIVEENETEVGGYKEIVFQVKGAGA 174

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           Y  LK E GVHR+ R+   +++ R HTS +++ V P   + +EIEI   D  IDTYR+SG
Sbjct: 175 YSKLKFESGVHRVQRVPATEASGRIHTSAATVAVMP-QAEDVEIEIRPEDLDIDTYRSSG 233

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           AGGQHVN TDSAVRITH PTG+VV CQ ERSQ KN+A+A  +LRA+LY+LELQK++    
Sbjct: 234 AGGQHVNMTDSAVRITHKPTGLVVTCQDERSQIKNRAKAMMVLRARLYDLELQKKQSE-- 291

Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              + +  IG G    +IR+Y   P   V D R  +       +LDGD+ + + A     
Sbjct: 292 EASTRRGMIGSGDRSERIRTYNF-PQNRVTDHRIGLTLYKLDYMLDGDIYEMIDALTMAD 350

Query: 355 K 355
           +
Sbjct: 351 Q 351


>gi|165975783|ref|YP_001651376.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|165875884|gb|ABY68932.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
          Length = 301

 Score =  226 bits (576), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 156/299 (52%), Positives = 212/299 (70%), Gaps = 1/299 (0%)

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
            ++ I+ +   + D   L+ELA+E +D     E       ++ ++   +F+ + SG+ D+
Sbjct: 2   VVNTIRALDQGVEDVEGLIELAVEAEDEDTFNEAQAEANELEEKLAKLEFQRMFSGQHDA 61

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
            D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G
Sbjct: 62  ADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITG 121

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YR
Sbjct: 122 EYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYR 181

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASGAGGQHVN T+SAVRITHIP+ +VVQCQ  RSQH+NK Q    L+AKLYE+E+ K+  
Sbjct: 182 ASGAGGQHVNKTESAVRITHIPSSIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNA 241

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
                E SK++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 242 EKQAMEESKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKFIEASLKA 299


>gi|162147177|ref|YP_001601638.1| peptide chain release factor 2 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|161785754|emb|CAP55325.1| Peptide chain release factor 2 [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 322

 Score =  226 bits (576), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 187/302 (61%), Positives = 242/302 (80%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRER  L   +  ++ ++  + D L L+ELA  E D ++L++    L+ +  E + ++ E
Sbjct: 1   MRERTLLAGQVEGVQRLEADVRDTLDLVELAEMEGDDAVLKDAVQMLRALAEEAKRRETE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           SLLSGEADSND YLEV+AGAGGTE+QDWA MLLRMYTRWAE+  +K   +E  +GE+AG+
Sbjct: 61  SLLSGEADSNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVALMESSEGEQAGL 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ + GPNAYGWLK E GVHRLVRISP+D+ +RR TSF+S+WVYPVVDDSIEIEI+E
Sbjct: 121 KSATIQVTGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVVDDSIEIEINE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D ++DT+RASGAGGQHVN T+SA+RITHIPTG++V CQ +RSQH+N+A A  ML+A++Y
Sbjct: 181 ADLKVDTFRASGAGGQHVNKTESAIRITHIPTGIIVACQTDRSQHRNRATAMTMLKARMY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E ELQ+RE  A   E++KT+IGWG QIRSYVL PYQ+VKDLRT++E+ +P  VLDGDLDD
Sbjct: 241 EQELQRREAAAAQTEAAKTDIGWGHQIRSYVLAPYQLVKDLRTSVERGNPDAVLDGDLDD 300

Query: 346 FM 347
           FM
Sbjct: 301 FM 302


>gi|160935042|ref|ZP_02082428.1| hypothetical protein CLOLEP_03918 [Clostridium leptum DSM 753]
 gi|156866495|gb|EDO59867.1| hypothetical protein CLOLEP_03918 [Clostridium leptum DSM 753]
          Length = 358

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 113/352 (32%), Positives = 192/352 (54%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +   ++    N K  DP +  +      LM+E + L+  +   KE + +  +   
Sbjct: 1   MFDRLEVFEKKYEECNQKLYDPAVVSDPEAYAALMKEVKGLEPVVEKYKEYKKQKNNEEE 60

Query: 72  LLELALEEDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
             +L  E       +E       +  + ++   E  +   L     D  +  +E+  GAG
Sbjct: 61  AKQLLAEGGLEKDFREMVELELEEARESLEKISEELKILLLPKDPNDDRNVIVEIRGGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  ++  L RMY+ +AE +++KTE L  ++ E  G K  + +I G  AY  +K E G
Sbjct: 121 GEEAALFSASLFRMYSMYAETKRWKTEILNANETELGGYKEISFMITGEGAYSRMKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS  ++ V P   + +E+EI+ SD +IDT+R+ GAGGQH+N T
Sbjct: 181 VHRVQRVPETETQGRIHTSTVTVAVLP-EAEDVEVEINPSDLKIDTFRSGGAGGQHINKT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSA+RITH+PTG+VV+CQ ERSQ+KNK +A  +L+++L E E +K++    + +  K+++
Sbjct: 240 DSAIRITHLPTGLVVECQDERSQYKNKDKAMKVLKSRLLEAEREKQQNE--VAQERKSQV 297

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   + D R  +      DV++G+LD+ + A +   +
Sbjct: 298 GTGDRSERIRTYNF-PQGRLTDHRIGLTLYRLEDVMNGNLDEVIDALITADR 348


>gi|85711946|ref|ZP_01043000.1| Protein chain release factor A [Idiomarina baltica OS145]
 gi|85694132|gb|EAQ32076.1| Protein chain release factor A [Idiomarina baltica OS145]
          Length = 362

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 111/329 (33%), Positives = 176/329 (53%), Gaps = 9/329 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     +P +     + + L +E   L+  +S     +    D     E+
Sbjct: 9   LEGLIERYEEVQALLGEPDIISEQDKFRSLSKEYAQLEEVVSAFNSYRQAQSDLTAAHEM 68

Query: 76  ALEEDDCSILQETS---DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           A ++D            D  QR++      Q   L     D    YLE+ AGAGG E+  
Sbjct: 69  ADDDDPEMREMANEEIADAKQRVESLENSLQVLLLPKDPNDDRACYLEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE+  ++   +  ++GE  G K     + G   YG +K E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAEQHGWRVSTVSANEGEHGGYKEVIAQLSGDGVYGRMKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P + ++  IEI+ +D R+DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVAVLPEIPEAEAIEINPADLRVDTFRASGAGGQHVNRTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+P+GVVV+CQ+ERSQHKN+A+A ++L+++L  +E +KR +      + ++ +G G   
Sbjct: 249 THLPSGVVVECQEERSQHKNRAKAMSVLQSRLQRMEDEKRAQE--EASTRRSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
            +IR+Y   P   V D R N+      +V
Sbjct: 307 ERIRTYNY-PQSRVTDHRINLTLYRLDEV 334


>gi|329929018|ref|ZP_08282820.1| peptide chain release factor 1 [Paenibacillus sp. HGF5]
 gi|328937007|gb|EGG33436.1| peptide chain release factor 1 [Paenibacillus sp. HGF5]
          Length = 355

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 107/351 (30%), Positives = 180/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D   +   R   L+    DP +  +  + +   +E+  L  A     E ++ + +   
Sbjct: 1   MLDRLQSLADRYEKLSELLCDPDVANDSKKLRDYSKEQSDLQPAYEAYVEYKNVIEELEA 60

Query: 72  LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +  E+ D  + +          QR +   E  +   L     D  +  +E+   AGG
Sbjct: 61  AKTMQGEKMDDEMREMVKMEIEELTQREQELAERIRILLLPKDPNDDKNVIIEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A+ L RMYTR+A+ + +K E ++++  +  G K    +I G  AY  +K E G 
Sbjct: 121 DEAALFASDLYRMYTRYADTQGWKVELMDVNTNDLGGFKEVIFMINGRGAYSKMKFESGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS S++ V P   + ++IEI + D R+DT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRIPTTESGGRIHTSTSTVAVMP-EAEEVDIEIHDKDIRVDTFCSSGAGGQSVNTTK 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V  CQ  +SQ+ NK +A  +LRA+++++  Q  EE A      K+++G
Sbjct: 240 SAVRVTHIPTGIVATCQDGKSQNSNKEKALQVLRARIFDMMRQ--EEEAKYAGERKSKVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       V++G++++ + A    ++
Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTVHKLDQVMNGEIEEIVSALTLAEQ 347


>gi|32033623|ref|ZP_00133934.1| COG1186: Protein chain release factor B [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126207810|ref|YP_001053035.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           L20]
 gi|126096602|gb|ABN73430.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 301

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 157/299 (52%), Positives = 213/299 (71%), Gaps = 1/299 (0%)

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
            ++ I+ +   + D   L+ELA+E +D     E       ++ ++   +F+ + SG+ D+
Sbjct: 2   VVNTIRTLDQGVEDVEGLIELAVEAEDEDTFNEAQAEANELEEKLAKLEFQRMFSGQHDA 61

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
            D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G
Sbjct: 62  ADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITG 121

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YR
Sbjct: 122 EYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINPADLRIDVYR 181

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASGAGGQHVN T+SAVRITHIP+G+VVQCQ  RSQH+NK Q    L+AKLYE+E+ K+  
Sbjct: 182 ASGAGGQHVNKTESAVRITHIPSGIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNA 241

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
                E SK++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 242 EKQAMEESKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKFIEASLKA 299


>gi|313500280|gb|ADR61646.1| PrfB [Pseudomonas putida BIRD-1]
          Length = 304

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 167/302 (55%), Positives = 219/302 (72%), Gaps = 1/302 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L   +  + ++ + L D   LL++A+EE+D   + +    L+ ++  +   +F  + SGE
Sbjct: 2   LAQVVETLDKLSNGLGDCQDLLDMAVEENDEGAVGDVVTELESLEENLAQLEFRRMFSGE 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+ +GE AGIK AT+ 
Sbjct: 62  MDMNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVH 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ SD RID
Sbjct: 122 IKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPSDLRID 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QK
Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R   +   E SK++IGWG QIRSYVL     +KDLRT +E++    VLDGDLD +++A+L
Sbjct: 242 RNAASQALEDSKSDIGWGHQIRSYVLDD-SRIKDLRTGVERSDCQKVLDGDLDQYLEASL 300

Query: 352 AI 353
             
Sbjct: 301 KQ 302


>gi|266621433|ref|ZP_06114368.1| peptide chain release factor 1 [Clostridium hathewayi DSM 13479]
 gi|288866872|gb|EFC99170.1| peptide chain release factor 1 [Clostridium hathewayi DSM 13479]
          Length = 358

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 114/351 (32%), Positives = 189/351 (53%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D+ +     L  +  +P + ++    + LM+E+  L   +    E +        
Sbjct: 1   MFDKLDDILIHYEELMLELGNPSVTEDQNRFRRLMKEQADLAPLVETYTEYKKAKTAVED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            L +  EE+D  + +   + L   K ++E  +       L     D  +  LE+ AGAGG
Sbjct: 61  SLAILDEENDEEMRELAKEELSDAKKQIEALEQELKILLLPKDPNDDKNIILEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY  ++E + +K E + +++    G K    ++ G  AY  LK E GV
Sbjct: 121 DEAALFAAELYRMYVNYSESQHWKVELISVNENGIGGFKEVVAMVTGKGAYSKLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +++ I + DCRID  RASG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVMP-EAEDVDVVIEDKDCRIDVMRASGNGGQCVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V+  Q E+SQ +NK +A+ +LR+KLY++EL+KR+   +  E  +++IG
Sbjct: 240 SAVRLTHIPTGIVIYSQTEKSQLQNKEKAFRLLRSKLYDMELEKRQ--NSEAEERRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++GD+ + + + +A  +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLYKIDSIMNGDITELLDSLIAADQ 347


>gi|218890021|ref|YP_002438885.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa
           LESB58]
 gi|218770244|emb|CAW26009.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa
           LESB58]
          Length = 303

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 168/300 (56%), Positives = 223/300 (74%), Gaps = 1/300 (0%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113
             +  + ++   L D+  LL++A+EEDD   + + ++ ++R++  +E  +F  + SGE D
Sbjct: 3   QVVETLDDLTSGLADSRDLLDMAVEEDDEGAVDDVANEVERLREILEKLEFRRMFSGEMD 62

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
            N+AYL++ AG+GGTE+QDWANMLLRMY RWA+K  F    +E+ +GE AGIK AT+ IK
Sbjct: 63  PNNAYLDIQAGSGGTEAQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIKGATVHIK 122

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G  A+GWL+ E GVHRLVR SP+DS +RRHTSF++++V P +DD+IEIEI+ +D RIDTY
Sbjct: 123 GEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPADLRIDTY 182

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QKR 
Sbjct: 183 RSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRT 242

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             +   E SK++IGWG QIRSYVL     +KDLRT IE++    VLDGDLD++++A+L  
Sbjct: 243 AASQALEDSKSDIGWGHQIRSYVLD-QSRIKDLRTGIERSDCDKVLDGDLDEYLEASLKQ 301


>gi|49475632|ref|YP_033673.1| peptide chain release factor 2 [Bartonella henselae str. Houston-1]
 gi|49238439|emb|CAF27667.1| Peptide chain release factor 2 [Bartonella henselae str. Houston-1]
          Length = 322

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 211/309 (68%), Positives = 257/309 (83%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD++I+ I+     L + + L+ +  EE D  I+ +  ++++ +K E++ +Q +
Sbjct: 2   MRERQRLDDSINGIRSFTKTLEECIELIAMGEEESDIEIITDAENSIRNLKSEIDKRQID 61

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD ND YLEVHAGAGGTESQDWA+MLLRMY RWAE+ K K E LEIHDGEEAGI
Sbjct: 62  ALLSGEADQNDTYLEVHAGAGGTESQDWASMLLRMYMRWAEQHKMKVEILEIHDGEEAGI 121

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSATLL+KG NAYG LK E GVHRLVRISP+DSN++RHTSF+SIWVYPV+DD+IE+++SE
Sbjct: 122 KSATLLVKGHNAYGMLKTESGVHRLVRISPFDSNAKRHTSFASIWVYPVIDDNIEVDVSE 181

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+LY
Sbjct: 182 ADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRAIAWSMLRARLY 241

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE  N  E+SKTEIGWG QIRSYVLQPYQ+VKDLRT +E T P  VL+G+LD 
Sbjct: 242 EEELKKREEETNAVEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTDPQSVLNGNLDS 301

Query: 346 FMKATLAIK 354
           F++A LA +
Sbjct: 302 FIEAALARR 310


>gi|227486771|ref|ZP_03917087.1| peptide chain release factor RF1 [Anaerococcus lactolyticus ATCC
           51172]
 gi|227235241|gb|EEI85256.1| peptide chain release factor RF1 [Anaerococcus lactolyticus ATCC
           51172]
          Length = 358

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 127/351 (36%), Positives = 194/351 (55%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  ++  +    L  K  DP +  ++ + + + +E   L   +   +EI++       
Sbjct: 1   MFENLEHVRENYKQLEAKLADPAVLADMDQFRKVSKEYNSLKPVVEKYEEIKNAEDTIAE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             EL  E DD  ++Q   D ++  K +     +  Q   +     D  D  +E+  GAGG
Sbjct: 61  NQELINEADDQDMIQMLKDEIEENKDKLEVLKDEMQILLIPKDPNDEKDVIVEIRPGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY  +A+K  FKTE +E++     GIK AT +++G  AY  LK E GV
Sbjct: 121 DEAGLFAGDLYRMYNMYADKAGFKTEEIEVNTQGVGGIKDATFVVRGEGAYSKLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   D +E+ I  +D R D YR+SG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVDEVELHIDPNDIRTDVYRSSGNGGQSVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+VV  Q E+SQ KNK +A  +LRA+LYELE QKR +   I ++ K+++G
Sbjct: 240 SAVRLTHIPTGLVVAIQDEKSQIKNKEKAMRVLRARLYELEEQKRNKE--IADNRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   + D R N       D L+GD++D + + +A  +
Sbjct: 298 TGDRSERIRTYNF-PQGRITDHRINKTIYQLDDFLNGDIEDMINSLIAEDQ 347


>gi|238797830|ref|ZP_04641323.1| Peptide chain release factor 1 [Yersinia mollaretii ATCC 43969]
 gi|238718358|gb|EEQ10181.1| Peptide chain release factor 1 [Yersinia mollaretii ATCC 43969]
          Length = 360

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 117/337 (34%), Positives = 176/337 (52%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +  +  KE +    D      +
Sbjct: 9   LEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTNCFKEWRSTQDDIEAAEMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE       R +   +  Q   L     D  D +LE+ AG GG E+  +A
Sbjct: 69  LDDLEMREMAQEELKEAKARSEELEQQLQLLLLPKDPDDERDCFLEIRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             + RMY+R+AE R++K E +   +GE  G K     + G  A+G LK E G HR+ R+ 
Sbjct: 129 GDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGEGAFGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR+         +  +G G    +
Sbjct: 249 IPTGLVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQ--LAEASERRNLLGTGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQ 342


>gi|260494288|ref|ZP_05814419.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_33]
 gi|260198434|gb|EEW95950.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_33]
          Length = 357

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 121/351 (34%), Positives = 183/351 (52%), Gaps = 11/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +  V R   LN     P +  +  +     +    +   +   KE +  + D   
Sbjct: 1   MFDKLEEVVARYDELNKMLVSPEILADSKKMIECNKALNEITEIVEKYKEYKKYVDDIEF 60

Query: 72  LLELALEEDDCSILQE----TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + E    E D  + +       +  +++    E  +   L   + D  +  +E+ AGAGG
Sbjct: 61  IKESFKTEKDPDMKEMLNEELKEAEEKLPKLEEELKILLLPKDKNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE++K+K E +E  DGE  GIK     I G  AY  LK E GV
Sbjct: 121 DEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELGGIKEIAFTIIGLGAYSRLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +++ R HTS +++ V P V+D  E+ +   D +IDTYR+ GAGGQHVN TD
Sbjct: 181 HRVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVIVDPKDLKIDTYRSGGAGGQHVNMTD 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VVQCQ ERSQ KN+ +A   L  KLYE+E +K+          + ++G
Sbjct: 241 SAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQRSEVE--SERRLQVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   + D R  +        LDGD+D+ + A +   +
Sbjct: 299 TGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQ 348


>gi|253581892|ref|ZP_04859116.1| peptide chain release factor 2 [Fusobacterium varium ATCC 27725]
 gi|251836241|gb|EES64778.1| peptide chain release factor 2 [Fusobacterium varium ATCC 27725]
          Length = 328

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 149/327 (45%), Positives = 212/327 (64%), Gaps = 1/327 (0%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
            T +   W +   +  +++E       I+  K+++  + +  +L++     +     +  
Sbjct: 1   MTMEESFWNDKRSSSAVIKEMNEEKEIIAEFKKLESEVGEEEVLIDFVEMGETDFQAELE 60

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
             ++   K          LL GE DSN+A + +H+GAGGTE+ DWA+ML RMY+RW  ++
Sbjct: 61  EKHMILGKDIDH-FDTRLLLDGEFDSNNAIVTIHSGAGGTEACDWADMLYRMYSRWCNEK 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
           K+K   ++   G+  GIKS T L++G NAYG++K E+G+HRLVRISP+D+N +RHTSF+S
Sbjct: 120 KYKISEMDFMPGDSVGIKSITFLVEGSNAYGYMKSEKGIHRLVRISPFDANKKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P VD+S+E+ +   D RIDTYRASGAGGQHVN TDSAVRITHIPTG+VV CQ+ERS
Sbjct: 180 VEVMPEVDESVEVNVDAGDLRIDTYRASGAGGQHVNMTDSAVRITHIPTGIVVTCQRERS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q  N+  A  ML++KL ELE++K+EE     +  ++EIGWG QIRSYV QPY +VKD RT
Sbjct: 240 QLNNRETAMKMLKSKLIELEMKKKEEELKKIQGEQSEIGWGNQIRSYVFQPYTLVKDHRT 299

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIKK 355
             E  +   V+DGD+D F+   L   K
Sbjct: 300 AAESGNIKAVMDGDIDIFINTYLRWNK 326


>gi|325294472|ref|YP_004280986.1| peptide chain release factor 1 [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325064920|gb|ADY72927.1| Peptide chain release factor 1 [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 361

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 118/347 (34%), Positives = 184/347 (53%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V++   +      P +  +  + + L +E + L        E +         +E+
Sbjct: 9   LDRIVEKFKEIEESLGKPEIIADQKKFQALAKEHKELQPIYETYMEYKKTKQGIEEAIEI 68

Query: 76  ALEEDDCS----ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               ++        +E  +  +R++      +   +     D  +  LE+ AG GG E+ 
Sbjct: 69  IESANEDELIELAKEEKKELEERLEQLEAELKKLLIPKDPNDEKNVILEIRAGTGGEEAA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AEK+ +K E L +++    GIK     I G  AY  LK E GVHR+ 
Sbjct: 129 LFAQDLFRMYTRYAEKKGWKVEILSLNETGLGGIKEVIATISGKGAYSRLKYESGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ + P   + ++I I E D +IDTYR+SGAGGQHVNTTDSAVR
Sbjct: 189 RIPVTESGGRIHTSAATVAILP-EAEEVDIHIDEKDLKIDTYRSSGAGGQHVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV C  ERSQ +N+ +A  +LRA+L EL   +R++   +  + +++IG G  
Sbjct: 248 ITHIPTGIVVTCSNERSQIQNRIKAMKILRARLKELY--ERQQKEQLDSARRSQIGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +   +  + LDG+LD+ + A  A ++
Sbjct: 306 SEKIRTYNF-PENRVTDHRIKLTLYNLEEFLDGELDEMIDALTAAEQ 351


>gi|77164037|ref|YP_342562.1| peptide chain release factor 1 [Nitrosococcus oceani ATCC 19707]
 gi|254436043|ref|ZP_05049550.1| peptide chain release factor 1 [Nitrosococcus oceani AFC27]
 gi|119361569|sp|Q3JDR4|RF1_NITOC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|76882351|gb|ABA57032.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrosococcus
           oceani ATCC 19707]
 gi|207089154|gb|EDZ66426.1| peptide chain release factor 1 [Nitrosococcus oceani AFC27]
          Length = 360

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 117/346 (33%), Positives = 185/346 (53%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---LCDNLIL 72
            +   +R   L     +P +     + + L +E   L+  I   ++ +     L ++  L
Sbjct: 9   LETLAERQQELTALLAEPEIASAQKKFRELSQEYAQLEPVIGCFRDFEQAQSVLNESKAL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L+    E      +E +   ++++          L S   D  + +LE+ AG GG E+  
Sbjct: 69  LQDQDPELRVLAQEEIAAAEKKLERLDRELHTLLLPSDPNDKRNIFLEIRAGTGGDEAAL 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A+ LLRMY R+AE+R ++TE +    GE  G K   + I G  AY  LK E G HR+ R
Sbjct: 129 FASDLLRMYLRYAEQRGWRTEIMGDSPGEHGGHKEIIVRIVGAGAYSRLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ + P  ++  +I+I+ +D R+DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPQTESQGRIHTSACTVAIMPEAEEIDDIDINPADLRVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+ +G+VV+CQ ERSQHKN+A+A ++LR KL   E  K   +A    + ++ IG G   
Sbjct: 249 THLASGIVVECQDERSQHKNRARAMSLLRTKLKSEEEAKL--VAEETATRRSLIGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+      ++L G+LD  +   +A  +
Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYKLDEILQGNLDAIIDPLVAEHQ 351


>gi|294624919|ref|ZP_06703574.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294666711|ref|ZP_06731947.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292600798|gb|EFF44880.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292603536|gb|EFF46951.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 313

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 166/302 (54%), Positives = 216/302 (71%), Gaps = 1/302 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L+  +  I ++   L D   LLELA  E D         +L   +  VE  +F+ + SG+
Sbjct: 2   LEKTVIGIADVLSGLADAGDLLELAESEQDEDTAVAVIADLDNYQAHVEKLEFQRMFSGQ 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            DS +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE +E+  GE AGIKSAT+ 
Sbjct: 62  MDSANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTELMEVSGGEVAGIKSATVR 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I+G  AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P VDD+IEI+I+ +D R D
Sbjct: 122 IEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDNIEIDINPADLRTD 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            YR+SGAGGQHVN T+SAVRITHIPT  VV CQ  RSQH+N+  A  ML AKLYELE+QK
Sbjct: 182 VYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRDNAMKMLAAKLYELEVQK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R    +  E++K++IGWG QIR+YVL     +KDLRT IE++    VLDGDLD+F++A+L
Sbjct: 242 RNAEKDALEATKSDIGWGSQIRNYVLD-QSRIKDLRTGIERSDTQKVLDGDLDEFVEASL 300

Query: 352 AI 353
             
Sbjct: 301 KA 302


>gi|332800047|ref|YP_004461546.1| peptide chain release factor 1 [Tepidanaerobacter sp. Re1]
 gi|332697782|gb|AEE92239.1| Peptide chain release factor 1 [Tepidanaerobacter sp. Re1]
          Length = 356

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 125/348 (35%), Positives = 187/348 (53%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72
            +   ++   L  K  DP +     E   L +E   L+  ++  +E +    +L +N  L
Sbjct: 5   LEIIEKKYDELTKKIADPEIIARQEEWIGLTKEHASLEEIVTNFREYKEVLKQLEENSEL 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQF--ESLLSGEADSNDAYLEVHAGAGGTES 130
           LE A  + +   L ++       K     +Q     L     D  +  +E+ AG GG E+
Sbjct: 65  LEDAAGDIEMEQLIKSELEALEEKKSKLQEQLRILLLPQDPNDDRNVIMEIRAGTGGDEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY+R+AEK+ +K E ++ +  E  G K     I G  AY  LK E GVHR+
Sbjct: 125 ALFAGDLFRMYSRYAEKQGWKVEIIDSNPTELGGFKEVIFEINGKGAYSRLKYESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P     ++IEI+  D RID YRASG GGQ VNTTDSAV
Sbjct: 185 QRVPSTEAGGRIHTSAATVAVLP-EAHEVDIEINPDDLRIDIYRASGHGGQGVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG+VV CQ ERSQ KNK +A  +LRA+L  LE  + E+   I ++ ++++G G 
Sbjct: 244 RITHIPTGLVVTCQDERSQLKNKDKAMKVLRARL--LEKVQEEQEREIAQNRRSQVGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   + D R N+     ++VL G+LD+ + A +A  +
Sbjct: 302 RSERIRTYNF-PQGRITDHRINLTTHQLTNVLQGELDELIDALVAEDQ 348


>gi|300770142|ref|ZP_07080021.1| peptide chain release factor RF1 [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300762618|gb|EFK59435.1| peptide chain release factor RF1 [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 364

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 98/346 (28%), Positives = 173/346 (50%), Gaps = 12/346 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D      +R   +  +  +P    ++     L +E + L   +      ++ + +   
Sbjct: 8   MLDKLQAIKERWQEVEAELSNPDTISDMKRFAKLNKEYKDLSKIVDQYHIYKNMVSNIDA 67

Query: 72  LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             ++   E D  + +   +       + + + E  +   +     D+ +A +E+  G GG
Sbjct: 68  NKDILANEKDQELREMAKEELDILYGQKEEKEEEIRLMLIPKDPEDAKNAIIEIRGGTGG 127

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+ E + ++ E +++ +G   G K   L + G + YG LK E GV
Sbjct: 128 DEAALFAGDLYRMYTRFFETKGWRNEVMDVTEGTSGGYKEVILKVIGEDVYGQLKYESGV 187

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +S+ V P   + +++E++  D  + T R+ GAGGQ+VN  +
Sbjct: 188 HRVQRVPDTETQGRVHTSAASVAVLP-EAEDVDVELNPGDIEMQTSRSGGAGGQNVNKVE 246

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           + V++TH P+G+VV CQ ERSQ  N+  A  MLR KLYELE+QK+    +I    KT + 
Sbjct: 247 TKVQLTHKPSGIVVVCQVERSQLANRELAMEMLRNKLYELEVQKK--HGDIAAKRKTMVS 304

Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            G +   +R+Y   P   V + R  +   +   V+DGD+   + A 
Sbjct: 305 TGDRSAKVRTYNY-PQGRVTEHRIGLTLYNLPAVMDGDIQGIIDAL 349


>gi|297585440|ref|YP_003701220.1| peptide chain release factor 1 [Bacillus selenitireducens MLS10]
 gi|297143897|gb|ADI00655.1| peptide chain release factor 1 [Bacillus selenitireducens MLS10]
          Length = 356

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 114/351 (32%), Positives = 186/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           +FD  ++   R   LN    DP +  +  + +   +E+  L   +   ++ +D   ++ D
Sbjct: 1   MFDRLESVENRYEQLNELLMDPAVMNDTDKLRDYSKEQSGLQETVEAYRQYKDIKSQVED 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127
              +L   L+++   + +   D L+    E+E K +   +     D  +  +EV   AGG
Sbjct: 61  TKEMLRDHLDDEMREMAKMELDELETELGELEEKLRVLLIPKDPNDDKNVIVEVRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY R+AE + +KT+ +E  +    G K     I G  AY  +K E G 
Sbjct: 121 DEAALFAGDLYRMYHRYAESQGWKTDVIEASETGIGGYKEIVFTINGTGAYSKMKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +E++ISE D R+D + +SG GGQ VNTT 
Sbjct: 181 HRVQRVPATESGGRIHTSTATVAVLP-EAEDVEVDISEKDIRVDRFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+VV CQ E+SQ KNK +A  +LRA++Y+    +RE  A   E+ K+ +G
Sbjct: 240 SAVRLTHEPTGIVVSCQDEKSQIKNKEKAMKVLRARIYDKY--QREAQAEYDENRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+G LD+ ++A +  ++
Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTIQKLDQILEGKLDEIIEALIVEEQ 347


>gi|212636630|ref|YP_002313155.1| peptide chain release factor 1 [Shewanella piezotolerans WP3]
 gi|226739120|sp|B8CQV2|RF1_SHEPW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|212558114|gb|ACJ30568.1| Peptide chain release factor 1 [Shewanella piezotolerans WP3]
          Length = 361

 Score =  226 bits (575), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 111/342 (32%), Positives = 182/342 (53%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     D  +  +    + L +E   L++ +   K  Q    D     E+
Sbjct: 9   LEGLLERNEEVLALLSDAGIIADQERFRALSKEYSQLEDVVKAFKSFQQAEEDLESAKEM 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D         +     + I+      Q   L     D N+ ++E+ AGAGG E+  
Sbjct: 69  MEEDDAELKEMAQEEYKAAKETIETLESELQILLLPKDPNDDNNCFIEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AE  +++ E +  ++GE  G K     I G   YG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSKYAESNRWQIEVMNTNEGEHGGFKEVIAKISGEGVYGKLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P + ++  IEI+++D ++DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRVHTSACTVIVLPEIPEAEAIEINKADLKVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV+CQ +RSQHKN+AQA ++L A++  +E +KR    +   + +  +  G   
Sbjct: 249 THIPTGIVVECQDQRSQHKNRAQAMSVLSARIQAVEDEKRRSEED--STRRNLVSSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +IR+Y   P   V + R N+      + ++GD+D  ++  +
Sbjct: 307 ERIRTYNF-PQGRVSEHRINLTLYRLGEFMEGDIDVVIEPLI 347


>gi|283850912|ref|ZP_06368198.1| peptide chain release factor 1 [Desulfovibrio sp. FW1012B]
 gi|283573835|gb|EFC21809.1| peptide chain release factor 1 [Desulfovibrio sp. FW1012B]
          Length = 357

 Score =  226 bits (575), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 108/350 (30%), Positives = 177/350 (50%), Gaps = 11/350 (3%)

Query: 13  LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F   ++  ++   L  +  DP +  +    + L +    + + ++  +E +    D   
Sbjct: 1   MFAKLESLERKYVELEKQLSDPSVVNDQERYRKLTKAHADMADMMAAFREHKQLSRDLEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
             E+A + D        ++     +         +   L     D  +  LE+ AG GG 
Sbjct: 61  NQEMAQDPDPEMRELALAEIKAIKEALPEIEARLKLLLLPKDPMDDKNILLEIRAGTGGE 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY R+AE R++K E +   +    G K     I G   Y  LK E G H
Sbjct: 121 EAALFAGDLFRMYCRYAEARRWKVELMSQSETGSGGYKEVIASIAGDKVYSRLKYESGAH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ + P   + +++ I  +D RID YR+SG GGQ VNTTDS
Sbjct: 181 RVQRVPATESQGRIHTSAVTVAIMP-EAEEVDVAIDPNDLRIDVYRSSGPGGQSVNTTDS 239

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+TH+P+G+VV CQ E+SQHKNKA+A  +LR++L ++E +K+        + ++++G 
Sbjct: 240 AVRVTHVPSGLVVICQDEKSQHKNKAKALKVLRSRLLQIEQEKQRLEQE--ATRRSQVGT 297

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G    +IR+Y   P   V D R N+       VL+GDLD+  +  +A  +
Sbjct: 298 GDRSERIRTYNF-PQSRVTDHRINLTLYRLEAVLEGDLDELCEGLIAHYQ 346


>gi|226946181|ref|YP_002801254.1| peptide chain release factor 1 [Azotobacter vinelandii DJ]
 gi|259585215|sp|C1DEV0|RF1_AZOVD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226721108|gb|ACO80279.1| peptide chain release factor 1 [Azotobacter vinelandii DJ]
          Length = 360

 Score =  226 bits (575), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 113/346 (32%), Positives = 176/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +       +   +E   ++  ++  +E +    D      L
Sbjct: 9   LDLLHDRYEELTALLGDAEVIAEQGRFRAYSKEYAEVEPVVAAYREFRKVRDDLAGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE---VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +  +  +      +  Q   L     D+ + +LE+ AG GG E+  
Sbjct: 69  LKDSDPDLREMAAEEVAEARERLAGLEDRLQRMLLPRDPNDARNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AEK+ ++ E L  + GE  G K     ++G N YG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAEKQGWRIEILSENPGEHGGYKEIITRVEGDNVYGKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI+ ++ R+DTYR+SGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQAAIEINPAELRVDTYRSSGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ+ERSQHKN+A+A   L AKL +   Q       I E+ +  +G G   
Sbjct: 249 THLPTGIVVECQEERSQHKNRAKAMAWLAAKLQD--RQDAAAHREISETRRLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V + R N+   +  +V+ G ++  ++  L+  +
Sbjct: 307 ERIRTYNF-PQGRVTEHRINLTLYALDEVMAGGVEAVIEPLLSEYQ 351


>gi|256545370|ref|ZP_05472733.1| peptide chain release factor 1 [Anaerococcus vaginalis ATCC 51170]
 gi|256398931|gb|EEU12545.1| peptide chain release factor 1 [Anaerococcus vaginalis ATCC 51170]
          Length = 357

 Score =  226 bits (575), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 122/348 (35%), Positives = 191/348 (54%), Gaps = 11/348 (3%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           + ++  +    L  K  DP +  +    K + RE   L   +    +I+          E
Sbjct: 4   NLEHMRENFKELEKKLADPEVLSDTERFKKVSREYNQLKPIVEKYNQIRSAEDMINENTE 63

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTES 130
           L  E DD  ++      +   K  +E      +   + +   D  D  +E+ AGAGG E+
Sbjct: 64  LLKEADDKEMIDLLKSEIDENKKNLEKYNEDLKVLLIPTDPNDHKDVIVEIRAGAGGEEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY  +A+K+K+KTE +++      G+K AT +++G  AY  LK E GVHR+
Sbjct: 124 GLFAGNLYRMYHMYADKQKYKTEDIDVSSQGIGGMKEATFIVRGEGAYSKLKYESGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D ++I+I  +D R D YR+SG GGQ VNTTDSAV
Sbjct: 184 QRVPETESGGRIHTSTATVAVLP-EADEVDIKIDPNDIRTDVYRSSGNGGQSVNTTDSAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+THIPTG+VV CQ E+SQ KNK +A  +LRA+LYE+E QKR++   I ++ K+++G G 
Sbjct: 243 RLTHIPTGLVVTCQDEKSQIKNKDKAMRVLRARLYEIEEQKRQKE--ISDNRKSQVGTGD 300

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   + D R N       D LDG++++ +++ +   +
Sbjct: 301 RSERIRTYNY-PQGRITDHRINKTIYQLDDFLDGNIEEMIESLITEDQ 347


>gi|293395774|ref|ZP_06640056.1| peptide chain release factor RF1 [Serratia odorifera DSM 4582]
 gi|291421711|gb|EFE94958.1| peptide chain release factor RF1 [Serratia odorifera DSM 4582]
          Length = 361

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 112/337 (33%), Positives = 174/337 (51%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +      E +    D      +
Sbjct: 9   LEALQERHEEVQALLGDAGVIADQDRFRALSREYAQLTDVSRCFLEWRQVQDDVATAEMM 68

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   +  +E     +  +   +  Q   L     D    +LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQEELKQARETTETLEQQLQLLLLPKDPDDERSCFLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +  ++GE  G K     + G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRVEVMSANEGEHGGYKEVIAKVSGDGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P V ++   EI+  D +IDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVMPEVPEAELPEINAGDLKIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQ 342


>gi|260598215|ref|YP_003210786.1| peptide chain release factor 1 [Cronobacter turicensis z3032]
 gi|260217392|emb|CBA31449.1| Peptide chain release factor 1 [Cronobacter turicensis z3032]
          Length = 360

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 176/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      E +    D      +
Sbjct: 9   LEALQERHEEVQALLGDAGTLADQERFRALSREYAQLSDVSRCFLEWRQVQEDMETARLM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+       + +   +  Q   L     D  +AY+EV AG GG E+  +A
Sbjct: 69  LSDPEMRDMAQDELLEAKAKGEALEQELQLLLLPKDPDDERNAYVEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESRRWRVEIMSASEGEHGGYKEVIAKISGEGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A  +L A+++  E  KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALAVLGARIHAAEAAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            R+Y   P   V D R N+      +V++G LD  ++  +   +
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDALIEPIIQEHQ 349


>gi|255533998|ref|YP_003094370.1| peptide chain release factor 1 [Pedobacter heparinus DSM 2366]
 gi|255346982|gb|ACU06308.1| peptide chain release factor 1 [Pedobacter heparinus DSM 2366]
          Length = 357

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 102/342 (29%), Positives = 176/342 (51%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   +  +  +P   Q++     L +E + L   +   K  ++ + +     E+
Sbjct: 5   LEAIKLRWEDVEEQLSNPDTMQDMKRFAALNKEYKDLGKIVDEYKVYKNVMSNIEANKEI 64

Query: 76  ALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L     + +   E  +   +     D+ +A  E+  G GG E+ 
Sbjct: 65  LSTEKDAEMREMAKEELDLLLVQQEELEEKVRLMLIPVDPEDAKNAVFEIRGGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+ E++ +K E +++ +G   G K   L + G + YG LK E GVHR+ 
Sbjct: 125 LFAGDLYRMYSRFFEQKGWKVETVDVTEGTAGGYKEVILKVSGEDVYGQLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P   + I++ I+ +D  + T R+ GAGGQ+VN  ++ V+
Sbjct: 185 RVPDTETQGRVHTSAASVAVLP-EAEEIDLYINPADIDLQTSRSGGAGGQNVNKVETKVQ 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +TH P+G+VV CQQERSQ  N+  A  MLR+KLY++ELQK+    +I    KT +  G +
Sbjct: 244 LTHRPSGIVVVCQQERSQLGNRVIAMEMLRSKLYDIELQKKN--GDIAARRKTMVSTGDR 301

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              IR+Y   P   V D R  +   + + ++DG + + + A 
Sbjct: 302 SAKIRTYNY-PQGRVTDHRIGLTLYNLNSIMDGGVQELIDAL 342


>gi|188534015|ref|YP_001907812.1| peptide chain release factor 1 [Erwinia tasmaniensis Et1/99]
 gi|238689693|sp|B2VEH7|RF1_ERWT9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|188029057|emb|CAO96925.1| Peptide chain release factor 1 (RF-1) [Erwinia tasmaniensis Et1/99]
          Length = 360

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 111/337 (32%), Positives = 175/337 (51%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     ++ Q    D      +
Sbjct: 9   LEALQERHEEVEAMLGDAGVIADQERFRALSREYAQLTDVSQCFRQWQQSQEDIETAEMM 68

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   +  +E        +   +  Q   L     D  + YLEV AG GG E+  +A
Sbjct: 69  LSDAEMRDMAQEELQTARAASEELEQQLQVLLLPKDPDDERNCYLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R++K E +  ++GE  G K     + G  AYG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESRRWKVEVMSANEGEHGGYKEVIAKVVGEGAYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +I+ SD +IDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A  +L +++   E+ +R++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARRQQE--ESSTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      + ++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTIYRLDEAMEGKLDALIE 342


>gi|215486443|ref|YP_002328874.1| peptide chain release factor 1 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312966451|ref|ZP_07780673.1| peptide chain release factor 1 [Escherichia coli 2362-75]
 gi|254790880|sp|B7UQ99|RF1_ECO27 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|215264515|emb|CAS08882.1| peptide chain release factor RF-1 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312288904|gb|EFR16802.1| peptide chain release factor 1 [Escherichia coli 2362-75]
          Length = 360

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 114/344 (33%), Positives = 179/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+     +    ++E +     L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQDELREAKEKSEQLEQQLHVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            R+Y   P   V D R N+      +V++G LD  ++  +   +
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 349


>gi|330817652|ref|YP_004361357.1| peptide chain release factor 2 [Burkholderia gladioli BSR3]
 gi|327370045|gb|AEA61401.1| peptide chain release factor 2 [Burkholderia gladioli BSR3]
          Length = 299

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 161/296 (54%), Positives = 216/296 (72%), Gaps = 1/296 (0%)

Query: 58  FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
            +  +   L D   L ELA EE+D   L  +      ++  V   +F  + S  AD N+ 
Sbjct: 3   TLTTLDGDLRDAQDLFELAREENDEDTLLASEGEAAELEKRVAEIEFRRMFSNPADPNNC 62

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FKTE LE  DG+ AGIK+AT+ + G  A
Sbjct: 63  FIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKTEVLEESDGDVAGIKNATIKVTGDYA 122

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           YG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+E++ +D RIDTYRASG
Sbjct: 123 YGFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPADLRIDTYRASG 182

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           AGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE E++KR+   +
Sbjct: 183 AGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEMRKRQAEQD 242

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             ESSKT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF+ A+L  
Sbjct: 243 KLESSKTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTRAVLDGDLDDFIGASLKQ 297


>gi|238788553|ref|ZP_04632346.1| Peptide chain release factor 1 [Yersinia frederiksenii ATCC 33641]
 gi|238723466|gb|EEQ15113.1| Peptide chain release factor 1 [Yersinia frederiksenii ATCC 33641]
          Length = 360

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 116/337 (34%), Positives = 174/337 (51%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     KE +    D      +
Sbjct: 9   LEALQERHEEVLAHLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSVQDDLDAAEMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE       R +   +  Q   L     D  D +LE+ AG GG E+  +A
Sbjct: 69  LEDPEMREMAQEELKEAKARSEELEQQLQLLLLPKDPDDERDCFLEIRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             + RMY+R+AE R++K E +   +GE  G K     + G   +G LK E G HR+ R+ 
Sbjct: 129 GDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGDGVFGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR+         +  +G G    +
Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQ--LAEASERRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQ 342


>gi|229014499|ref|ZP_04171617.1| Peptide chain release factor 1 [Bacillus mycoides DSM 2048]
 gi|229136148|ref|ZP_04264901.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST196]
 gi|229170037|ref|ZP_04297729.1| Peptide chain release factor 1 [Bacillus cereus AH621]
 gi|228613462|gb|EEK70595.1| Peptide chain release factor 1 [Bacillus cereus AH621]
 gi|228647307|gb|EEL03389.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST196]
 gi|228746849|gb|EEL96734.1| Peptide chain release factor 1 [Bacillus mycoides DSM 2048]
          Length = 358

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 119/352 (33%), Positives = 183/352 (51%), Gaps = 12/352 (3%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLC 67
           G+ D       R   LN    DP +  +  + +   +E+  + + +   +E +D   +L 
Sbjct: 3   GVLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDIQDTVEVYREYKDVREQLR 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAG 126
           D   +LE  L+ D   +++E    L+  +  +  + +   +     D  +  +EV   AG
Sbjct: 63  DAKAMLEDKLDADMRDMVKEEVSELEGQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAG 122

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E G
Sbjct: 123 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 182

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P   + +EI I E D R+DT+ +SG GGQ VNTT
Sbjct: 183 AHRVQRVPETESGGRIHTSTATVAVLP-EAEEVEINIHEKDVRVDTFASSGPGGQSVNTT 241

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K  +
Sbjct: 242 MSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAV 299

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 300 GTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350


>gi|156933676|ref|YP_001437592.1| peptide chain release factor 1 [Cronobacter sakazakii ATCC BAA-894]
 gi|166223556|sp|A7MKC1|RF1_ENTS8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|156531930|gb|ABU76756.1| hypothetical protein ESA_01498 [Cronobacter sakazakii ATCC BAA-894]
          Length = 360

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 112/344 (32%), Positives = 177/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      E +    D      +
Sbjct: 9   LEALQERHEEVQALLGDAGTLADQERFRALSREYAQLSDVSRCFLEWRQVQEDMETARLM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+       + +   +  Q   L     D  +A++EV AG GG E+  +A
Sbjct: 69  LSDPEMRDMAQDELLEAKAKSEALEQELQLLLLPKDPDDERNAFVEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESRRWRVEIMSASEGEHGGYKEVIAKISGEGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A  +L A+++  E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALAVLGARIHAAEVAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            R+Y   P   V D R N+      +V++G LD  ++  +   +
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDALIEPIIQEHQ 349


>gi|167625123|ref|YP_001675417.1| peptide chain release factor 1 [Shewanella halifaxensis HAW-EB4]
 gi|189039991|sp|B0TR27|RF1_SHEHH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|167355145|gb|ABZ77758.1| peptide chain release factor 1 [Shewanella halifaxensis HAW-EB4]
          Length = 361

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 112/346 (32%), Positives = 182/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     D  +  +    + L +E   L++ +   K  Q    D     E+
Sbjct: 9   LEGLLERNEEVLALLSDASIIADQERFRALSKEYSQLEDVVRTFKSYQQAEEDFESAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D         +     +         Q   L     D N+ ++E+ AGAGG E+  
Sbjct: 69  MEEDDPELKEMAQEEYKATKEAIATLEAELQILLLPKDPNDDNNCFIEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE ++++ E +  ++GE  G K     I G   YG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAESKRWQIEVMNTNEGEHGGFKEVIAKISGEGVYGKLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P V ++  IEI+++D ++DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRVHTSACTVIVLPEVPEAEAIEINKADLKVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV+CQ +RSQHKN+AQA ++L A++  +E +KR        + +  +  G   
Sbjct: 249 THIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEE--STRRNLVSSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V + R N+     ++ ++GD+D  ++  +   +
Sbjct: 307 ERIRTYNY-PQGRVSEHRINLTLYRLNEFMEGDIDCVVEPLIQENQ 351


>gi|15608439|ref|NP_215815.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Rv]
 gi|15840749|ref|NP_335786.1| peptide chain release factor 1 [Mycobacterium tuberculosis CDC1551]
 gi|31792492|ref|NP_854985.1| peptide chain release factor 1 [Mycobacterium bovis AF2122/97]
 gi|121637228|ref|YP_977451.1| peptide chain release factor 1 [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148661087|ref|YP_001282610.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Ra]
 gi|148822517|ref|YP_001287271.1| peptide chain release factor 1 [Mycobacterium tuberculosis F11]
 gi|167969626|ref|ZP_02551903.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Ra]
 gi|215403141|ref|ZP_03415322.1| peptide chain release factor 1 [Mycobacterium tuberculosis 02_1987]
 gi|215410938|ref|ZP_03419746.1| peptide chain release factor 1 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215426621|ref|ZP_03424540.1| peptide chain release factor 1 [Mycobacterium tuberculosis T92]
 gi|215430186|ref|ZP_03428105.1| peptide chain release factor 1 [Mycobacterium tuberculosis EAS054]
 gi|215445477|ref|ZP_03432229.1| peptide chain release factor 1 [Mycobacterium tuberculosis T85]
 gi|218753007|ref|ZP_03531803.1| peptide chain release factor 1 [Mycobacterium tuberculosis GM 1503]
 gi|219557200|ref|ZP_03536276.1| peptide chain release factor 1 [Mycobacterium tuberculosis T17]
 gi|224989703|ref|YP_002644390.1| peptide chain release factor 1 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253799655|ref|YP_003032656.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN
           1435]
 gi|254231557|ref|ZP_04924884.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis C]
 gi|254364196|ref|ZP_04980242.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           str. Haarlem]
 gi|254550307|ref|ZP_05140754.1| peptide chain release factor 1 [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260186238|ref|ZP_05763712.1| peptide chain release factor 1 [Mycobacterium tuberculosis CPHL_A]
 gi|260200352|ref|ZP_05767843.1| peptide chain release factor 1 [Mycobacterium tuberculosis T46]
 gi|260204557|ref|ZP_05772048.1| peptide chain release factor 1 [Mycobacterium tuberculosis K85]
 gi|289442738|ref|ZP_06432482.1| peptide chain release factor 1 [Mycobacterium tuberculosis T46]
 gi|289446894|ref|ZP_06436638.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           CPHL_A]
 gi|289554911|ref|ZP_06444121.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN
           605]
 gi|289569311|ref|ZP_06449538.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           T17]
 gi|289573962|ref|ZP_06454189.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           K85]
 gi|289745045|ref|ZP_06504423.1| peptide chain release factor 1 [Mycobacterium tuberculosis 02_1987]
 gi|289749853|ref|ZP_06509231.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           T92]
 gi|289753376|ref|ZP_06512754.1| peptide chain release factor 1 [Mycobacterium tuberculosis EAS054]
 gi|289757399|ref|ZP_06516777.1| peptide chain release factor 1 [Mycobacterium tuberculosis T85]
 gi|289761454|ref|ZP_06520832.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis GM
           1503]
 gi|297633851|ref|ZP_06951631.1| peptide chain release factor 1 [Mycobacterium tuberculosis KZN
           4207]
 gi|297730838|ref|ZP_06959956.1| peptide chain release factor 1 [Mycobacterium tuberculosis KZN
           R506]
 gi|298524803|ref|ZP_07012212.1| peptide chain release factor 1 [Mycobacterium tuberculosis
           94_M4241A]
 gi|306775471|ref|ZP_07413808.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu001]
 gi|306781618|ref|ZP_07419955.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu002]
 gi|306784023|ref|ZP_07422345.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu003]
 gi|306788386|ref|ZP_07426708.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu004]
 gi|306792713|ref|ZP_07431015.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu005]
 gi|306797119|ref|ZP_07435421.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu006]
 gi|306802999|ref|ZP_07439667.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu008]
 gi|306807189|ref|ZP_07443857.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu007]
 gi|306967388|ref|ZP_07480049.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu009]
 gi|306971580|ref|ZP_07484241.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu010]
 gi|307079294|ref|ZP_07488464.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu011]
 gi|307083863|ref|ZP_07492976.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu012]
 gi|313658170|ref|ZP_07815050.1| peptide chain release factor 1 [Mycobacterium tuberculosis KZN
           V2475]
 gi|54039048|sp|P66017|RF1_MYCBO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|54041593|sp|P66016|RF1_MYCTU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223571|sp|A1KI87|RF1_MYCBP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223574|sp|A5U1Z8|RF1_MYCTA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790891|sp|C1AMU3|RF1_MYCBT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|1322423|emb|CAA97732.1| PROBABLE PEPTIDE CHAIN RELEASE FACTOR 1 PRFA (RF-1) [Mycobacterium
           tuberculosis H37Rv]
 gi|13880941|gb|AAK45600.1| peptide chain release factor 1 [Mycobacterium tuberculosis CDC1551]
 gi|31618081|emb|CAD94192.1| PROBABLE PEPTIDE CHAIN RELEASE FACTOR 1 PRFA (RF-1) [Mycobacterium
           bovis AF2122/97]
 gi|121492875|emb|CAL71346.1| Probable peptide chain release factor 1 prfA [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|124600616|gb|EAY59626.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis C]
 gi|134149710|gb|EBA41755.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           str. Haarlem]
 gi|148505239|gb|ABQ73048.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Ra]
 gi|148721044|gb|ABR05669.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           F11]
 gi|224772816|dbj|BAH25622.1| peptide chain release factor 1 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253321158|gb|ACT25761.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN
           1435]
 gi|289415657|gb|EFD12897.1| peptide chain release factor 1 [Mycobacterium tuberculosis T46]
 gi|289419852|gb|EFD17053.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           CPHL_A]
 gi|289439543|gb|EFD22036.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN
           605]
 gi|289538393|gb|EFD42971.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           K85]
 gi|289543065|gb|EFD46713.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           T17]
 gi|289685573|gb|EFD53061.1| peptide chain release factor 1 [Mycobacterium tuberculosis 02_1987]
 gi|289690440|gb|EFD57869.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           T92]
 gi|289693963|gb|EFD61392.1| peptide chain release factor 1 [Mycobacterium tuberculosis EAS054]
 gi|289708960|gb|EFD72976.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis GM
           1503]
 gi|289712963|gb|EFD76975.1| peptide chain release factor 1 [Mycobacterium tuberculosis T85]
 gi|298494597|gb|EFI29891.1| peptide chain release factor 1 [Mycobacterium tuberculosis
           94_M4241A]
 gi|308216019|gb|EFO75418.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu001]
 gi|308325580|gb|EFP14431.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu002]
 gi|308331256|gb|EFP20107.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu003]
 gi|308335072|gb|EFP23923.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu004]
 gi|308338880|gb|EFP27731.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu005]
 gi|308342494|gb|EFP31345.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu006]
 gi|308346428|gb|EFP35279.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu007]
 gi|308350299|gb|EFP39150.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu008]
 gi|308355000|gb|EFP43851.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu009]
 gi|308358948|gb|EFP47799.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu010]
 gi|308362830|gb|EFP51681.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu011]
 gi|308366496|gb|EFP55347.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           SUMu012]
 gi|323720256|gb|EGB29355.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           CDC1551A]
 gi|326902921|gb|EGE49854.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
           W-148]
 gi|328459401|gb|AEB04824.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN
           4207]
          Length = 357

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 113/346 (32%), Positives = 167/346 (48%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L     DP L  N  EA+ + R    L   ++  +++     D     EL
Sbjct: 8   IDVLLAEHAELELALADPALHSNPAEARRVGRRFARLAPIVATHRKLTSARDDLETAREL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
              ++  +      +                      D++D  LEV +G GG ES  +A 
Sbjct: 68  VASDESFAAEVAALEARVGELDAQLTDML--APRDPHDADDIVLEVKSGEGGEESALFAA 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190
            L RMY R+AE+  +    L+    +  G K ATL I          +  +K E GVHR+
Sbjct: 126 DLARMYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + VYP  ++  +++I ESD RID +R+SG GGQ VNTTDSAV
Sbjct: 186 QRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQIDESDLRIDVFRSSGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG+VV CQ ERSQ +NK +A  +L A+L  +  ++    A+   +S+   +   
Sbjct: 246 RITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRTVDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R   +  +   VLDGDLD    A  A  K
Sbjct: 306 ERIRTYNF-PENRITDHRIGYKSHNLDQVLDGDLDALFDALSAADK 350


>gi|229064980|ref|ZP_04200278.1| Peptide chain release factor 1 [Bacillus cereus AH603]
 gi|228716281|gb|EEL67993.1| Peptide chain release factor 1 [Bacillus cereus AH603]
          Length = 358

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 119/352 (33%), Positives = 183/352 (51%), Gaps = 12/352 (3%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLC 67
           G+ D       R   LN    DP +  +  + +   +E+  + + +   +E +D   +L 
Sbjct: 3   GVLDRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQDTVEVYREYKDVREQLR 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAG 126
           D   +LE  L+ D   +++E    L+  +  +  + +   +     D  +  +EV   AG
Sbjct: 63  DAKAMLEDKLDADMRDMVKEEVSELEGQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAG 122

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E G
Sbjct: 123 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 182

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P   + +EI I E D R+DT+ +SG GGQ VNTT
Sbjct: 183 AHRVQRVPETESGGRIHTSTATVAVLP-EAEEVEINIHEKDVRVDTFASSGPGGQSVNTT 241

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K  +
Sbjct: 242 MSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAV 299

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 300 GTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350


>gi|293390164|ref|ZP_06634498.1| peptide chain release factor 2 [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290950698|gb|EFE00817.1| peptide chain release factor 2 [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 300

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 167/298 (56%), Positives = 217/298 (72%), Gaps = 1/298 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           ++ IK ++  L D   LLELA+E  D     E    L  ++ ++E  +F  + SGE D+ 
Sbjct: 2   VNTIKNLEQGLEDVDGLLELAVEAGDEDTFNEAIAELNALEQQLEKLEFRRMFSGEHDAC 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G 
Sbjct: 62  DCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRA
Sbjct: 122 YAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN T+SAVRITHIP+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+   
Sbjct: 182 SGAGGQHVNKTESAVRITHIPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNAD 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
               E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 242 KQAMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 298


>gi|227111330|ref|ZP_03824986.1| peptide chain release factor 1 [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 360

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 117/337 (34%), Positives = 179/337 (53%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     +P +  ++   + L RE   L +     ++ Q    D      +
Sbjct: 9   LEALQERHEEVQALLGEPSVIADMDRFRTLSREYAQLTDITGCFQQWQQAQEDQQTAEMM 68

Query: 76  ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE     +  I+   +  Q   L     D    +LEV AG GG E+  +A
Sbjct: 69  LDDPEMRDMAQEELKESKATIEALEQQLQVLLLPKDPDDERGCFLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   DGE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESRRWRVEVVSASDGEHGGYKEVIAKISGDGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V   V ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMAEVPEAEMPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVQKRQQE--EASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           IR+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDTLIQ 342


>gi|83591213|ref|YP_431222.1| peptide chain release factor 1 [Moorella thermoacetica ATCC 39073]
 gi|119361560|sp|Q2RFW0|RF1_MOOTA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|83574127|gb|ABC20679.1| bacterial peptide chain release factor 1 (bRF-1) [Moorella
           thermoacetica ATCC 39073]
          Length = 356

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 110/347 (31%), Positives = 175/347 (50%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   L     DP +  +  + +   R    L++ ++  +  +    +      +
Sbjct: 5   LEQIEARYEELGRLMGDPEVIADPEQLQKHARAHAALEDIVTTFRRYRQVSNELAEDKAM 64

Query: 76  ALEEDDCSILQETSDNLQR----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE D    +     ++R     +   +  +   L     D  D  +E+ AGAGG E+ 
Sbjct: 65  LEEEKDREFQELLKAEIERLTGEQERLEQELKILLLPKDPNDEKDIIMEIRAGAGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AEK++++TE +  H  E  G K     ++G   Y  LK E GVHR+ 
Sbjct: 125 LFAGDLFRMYQRYAEKKRWRTEIISSHPTELGGFKEIIFQVEGQGVYSRLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + +++EI   D R+D + +SG GGQ VNTT SAVR
Sbjct: 185 RIPTTESGGRIHTSTATVAVLP-EAEEVDVEIKPEDLRVDIFCSSGPGGQSVNTTYSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ E+SQ KNK +A  +LRA+L ++   +RE    + E  ++++G G  
Sbjct: 244 ITHLPTGLVVSCQDEKSQLKNKEKAMRVLRARLLDMARAEREGE--LAEERRSQVGSGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       VL G+LD+ + A +   +
Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTLHHLDQVLAGELDEIIDALVTTDQ 347


>gi|227328865|ref|ZP_03832889.1| peptide chain release factor 1 [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 360

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 117/337 (34%), Positives = 179/337 (53%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     +P +  ++   + L RE   L +     ++ Q    D      +
Sbjct: 9   LEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQQWQQAQEDQQTAEMM 68

Query: 76  ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE     +  I+   +  Q   L     D    +LEV AG GG E+  +A
Sbjct: 69  LDDPEMRDMAQEELKESKATIEALEQQLQVLLLPKDPDDERGCFLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   DGE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRVEVVSASDGEHGGYKEVIAKISGDGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V   V ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMAEVPEAEMPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVQKRQQE--EASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           IR+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDTLIQ 342


>gi|315127590|ref|YP_004069593.1| peptide chain release factor 2 [Pseudoalteromonas sp. SM9913]
 gi|315016104|gb|ADT69442.1| peptide chain release factor 2 [Pseudoalteromonas sp. SM9913]
          Length = 300

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 167/297 (56%), Positives = 210/297 (70%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  I  +     D   L+ELA+E +D     E    L  +  ++E  +F  + SG  DSN
Sbjct: 2   VETIDNLVAGTDDVEGLVELAVEAEDQDTFDEAQSELADLNQQLEGLEFRRMFSGSHDSN 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           DAYL++ +G+GGTE+QDW N+LLRMY RW E + FK E +E  DG+ AGIK AT+   G 
Sbjct: 62  DAYLDLQSGSGGTEAQDWCNILLRMYLRWGEAKGFKVELVEATDGDVAGIKGATVRFSGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S +VYP VDD+IEI+I+ SD RID YRA
Sbjct: 122 YAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFVYPEVDDNIEIDINPSDLRIDVYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVNTT+SAVRITH+PT  VVQCQ ERSQHKNKAQA   L+AKL+ELELQ++   
Sbjct: 182 SGAGGQHVNTTESAVRITHVPTNTVVQCQNERSQHKNKAQAMKQLKAKLFELELQQQNAE 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 242 KQSQEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKFIEASLK 297


>gi|182416046|ref|YP_001821112.1| peptide chain release factor 2 [Opitutus terrae PB90-1]
 gi|177843260|gb|ACB77512.1| peptide chain release factor 2 [Opitutus terrae PB90-1]
          Length = 341

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 160/327 (48%), Positives = 213/327 (65%), Gaps = 3/327 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL---ILLELALEEDDCSILQ 86
              P  W +   A+  + +   L  A+  +     ++ D      L+E A E +  S  Q
Sbjct: 1   MGAPTFWDSNERAQKHIAKLNGLKKAVLPVVAFHKKVEDLDVMVELVEAASEGERESYAQ 60

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E   N+  +  E++  +  S L+G+ D N+A L + +GAGGTES DWA+ML RMY RWAE
Sbjct: 61  ELDSNVTAMVEELDALEIASFLTGQFDRNNAILSIQSGAGGTESNDWADMLFRMYNRWAE 120

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           +R F  E  ++  G++AGI  ATLLIKG NAYG+ K E+GVHRLVRISP+D+N RRHTSF
Sbjct: 121 RRGFSIEVQDVQAGDQAGITKATLLIKGENAYGYAKAERGVHRLVRISPFDANKRRHTSF 180

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
            ++ V   + + +++EI+E+D RID YR+SG GGQ VNTTDSAVRITH+ +G+VV CQ E
Sbjct: 181 CAVDVVAEITEDVDVEINENDLRIDVYRSSGKGGQGVNTTDSAVRITHLSSGIVVVCQNE 240

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQ KNKA A N+L+A+LYE +  ++    +     K EIGWG QIRSYVLQPYQMVKDL
Sbjct: 241 RSQLKNKAAAMNVLKARLYEKKQDEQRAEMDKFYGEKGEIGWGAQIRSYVLQPYQMVKDL 300

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAI 353
           RT +  +    VLDGDLD F+ A L  
Sbjct: 301 RTGVSTSDTQGVLDGDLDRFVNAWLRA 327


>gi|260911088|ref|ZP_05917720.1| peptide chain release factor RF2 [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260634786|gb|EEX52844.1| peptide chain release factor RF2 [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 394

 Score =  226 bits (575), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 126/359 (35%), Positives = 204/359 (56%), Gaps = 12/359 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D D     L     +T+ P  W +   A+  M++ + ++  I   KE+
Sbjct: 32  IQERAEALHRYLDIDRKRVELEEEELRTQAPDFWDDPARAQEQMKKVKGIEKWIVGYKEV 91

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +     D+    +E  ++ ++    +E  +  ++L  + D  D  L+++
Sbjct: 92  RQATDELQLAFDFY--HDEMVTEEEVDEDYRKAITAIENLELMNMLRQKEDPMDCVLKIN 149

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWL 181
           +GAGGTESQDWA ML+RMY RWAE    +     + +G+EAGIKS T+ I+ G  AYG+L
Sbjct: 150 SGAGGTESQDWAQMLMRMYMRWAEAHGHRVTISNLQEGDEAGIKSVTMEIEGGEYAYGYL 209

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+ +  S    D +R+ GAGGQ
Sbjct: 210 KSENGVHRLVRVSPYNAQGKRMTSFASVFVSPLVDDTIEVYVDPSKVSWDLFRSGGAGGQ 269

Query: 242 HVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  ++ VR+ +  T         ++++  + R Q +N+  A  +L+++LY+  ++KR 
Sbjct: 270 NVNKVETGVRLRYQYTDPDTGEEEEILIENTESRKQLENRNNAMRLLKSQLYDRAMKKRL 329

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           E     E+ K +I WG QIRSYV    + VKD RTN +      V+DG +DDF+KA L 
Sbjct: 330 EAQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTADVDGVMDGKIDDFIKAYLM 387


>gi|253688500|ref|YP_003017690.1| peptide chain release factor 1 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259585241|sp|C6DHY1|RF1_PECCP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|251755078|gb|ACT13154.1| peptide chain release factor 1 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 360

 Score =  226 bits (575), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 117/337 (34%), Positives = 178/337 (52%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     +P +  ++   + L RE   L +     ++ Q    D      +
Sbjct: 9   LEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQQWQQAQEDQQTAEMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE        I+   +  Q   L     D    +LEV AG GG E+  +A
Sbjct: 69  LDDPEMRDMAQEELKEGKATIEALEQQLQVLLLPKDPDDERGCFLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   DGE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESRRWRVEVMSASDGEHGGYKEVIAKISGDGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V   V ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMAEVPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVQKRQQE--EASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           IR+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDTLIQ 342


>gi|90581727|ref|ZP_01237514.1| peptide chain release factor 1 [Vibrio angustum S14]
 gi|90437081|gb|EAS62285.1| peptide chain release factor 1 [Vibrio angustum S14]
          Length = 362

 Score =  226 bits (575), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 111/339 (32%), Positives = 176/339 (51%), Gaps = 9/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72
            +  V+R   +     D  +  +    + L +E   L+      +  Q    D      +
Sbjct: 9   LETLVERYEEVQHLLGDASVLADQNRFRALSKEYSQLEEVTKCFQAYQQAKEDLVAAEEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +    E      +E  +    I+   +  Q   +     D  + ++E+ AGAGG E+  
Sbjct: 69  AQEDDAEMREMAQEEIKEAKAEIERLADELQVLLIPKDPNDDRNCFVEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AE R ++ E +  +  E+ G K     + G   YG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSKYAESRGWRIEIINENRSEQGGYKEMIAKVNGDGVYGILKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P + ++   EI+  D +IDT+RASGAGGQHVNTTDSA+RI
Sbjct: 189 VPATESQGRVHTSACTVAVLPEIPEAEIPEINAGDLKIDTFRASGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E +KR        + +  +G G   
Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRHAE--EASTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +IR+Y   P   V D R  +     ++V++GDLD  ++
Sbjct: 307 DRIRTYNY-PQGRVSDHRITLTLYRLNEVMEGDLDALIQ 344


>gi|256848019|ref|ZP_05553463.1| peptide chain release factor 1 [Lactobacillus coleohominis
           101-4-CHN]
 gi|256715079|gb|EEU30056.1| peptide chain release factor 1 [Lactobacillus coleohominis
           101-4-CHN]
          Length = 362

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 108/355 (30%), Positives = 176/355 (49%), Gaps = 12/355 (3%)

Query: 9   CLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---D 64
            +  +FD       R   LN    DP +  +      L +E   L   +    + Q    
Sbjct: 2   EMEEIFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYHQYQKVTQ 61

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHA 123
            + D+  LL    +++   + +E   + +  + +     +   +     D  +  +E+  
Sbjct: 62  TIKDDEELLRDTKDDELIEMTKEELASSKEEQDQLAHELEVLLIPKDPNDDKNIIMEIRG 121

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
            AGG E+  +A  L  MY  +AEK+ +  E ++  + E  G K   L+I G   Y  LK 
Sbjct: 122 AAGGDEASLFAGDLYNMYLHYAEKQGWNVEIVDKTETEVGGFKEIVLMISGDKVYSKLKF 181

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ RI   +S  R HTS +++ V P   + ++I++   D R+D YR+SGAGGQH+
Sbjct: 182 ENGAHRVQRIPVTESAGRVHTSTATVGVMP-EAEDVQIDLDPKDIRVDVYRSSGAGGQHI 240

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L+A++Y+   QK  E +   +  K
Sbjct: 241 NKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKARVYDYYQQK--EQSAYDQKRK 298

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             IG G    +IR+Y   P   V D R  +       ++DGDLD+ ++A +   +
Sbjct: 299 DAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMDGDLDEIIEALIIADQ 352


>gi|168334105|ref|ZP_02692318.1| peptide chain release factor 1 [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 356

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 123/351 (35%), Positives = 192/351 (54%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD     V +   ++ K  +P +  + +  + LM+E   L   +   KE +  L     
Sbjct: 1   MFDQIKELVVKFENISAKVNEPAVIADQVTWRALMKEISTLSPIVEKYKEYKTVLTAIDD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGG 127
            L +  E+ D  +L    + L   K       E  +   L +   D  +  +E+  GAGG
Sbjct: 61  SLLMLEEKLDDDMLALVKEELSDNKKRVEPLEEELKILLLPTDPNDEKNVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY R+AE+ K+KTE ++I++    G K A  ++KG  AY  LK E GV
Sbjct: 121 DEAALFAADLYRMYHRFAERSKWKTELMDINENGIGGFKEAIFMLKGDGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS  ++ + P   + +++E++ +D ++D +R+SG GGQ VNTTD
Sbjct: 181 HRVQRVPDTESSGRIHTSTVTVAIMP-EAEDVDVEVNPNDVKVDVFRSSGNGGQSVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+VV CQ E+SQ KNK +A  +LRAKLYELEL K++ +  I    K+++G
Sbjct: 240 SAVRLTHLPTGIVVSCQDEKSQLKNKDKAMKVLRAKLYELELNKQKAL--IAAEKKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       VLDGDL++ +       +
Sbjct: 298 TGDRSERIRTYNF-PQGRVTDHRVGLTVHKLEQVLDGDLEEIISTLTTFDQ 347


>gi|171319081|ref|ZP_02908205.1| peptide chain release factor 1 [Burkholderia ambifaria MEX-5]
 gi|171095720|gb|EDT40676.1| peptide chain release factor 1 [Burkholderia ambifaria MEX-5]
          Length = 360

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 118/346 (34%), Positives = 176/346 (50%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72
            D    RL+ LN      ++  ++ + + L RE   L   +      +    D      L
Sbjct: 9   LDQLSTRLAELNDLLSRENVTADLDQYRRLTREHAELGPVVEQYALWRQSRNDETAAQEL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L  A   D       ++            K          D  + +LE+ AG GG ES  
Sbjct: 69  LADASMRDFAEDEIRSARERMVRLEGELQKMLL--PKDPNDDRNIFLEIRAGTGGDESAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R
Sbjct: 127 FAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV+CQ +RSQHKNK +A  +L A++ +   Q  E+ A    + K+ IG G   
Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N+       ++DGDLD+ + A +   +
Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYRLEALMDGDLDELIGALVTEHQ 349


>gi|34496516|ref|NP_900731.1| peptide chain release factor RF-2 [Chromobacterium violaceum ATCC
           12472]
 gi|34102370|gb|AAQ58736.1| peptide chain release factor RF-2 [Chromobacterium violaceum ATCC
           12472]
          Length = 299

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 159/294 (54%), Positives = 214/294 (72%), Gaps = 1/294 (0%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           +  I   + D+  L ++   E+D   +     +L+ ++ +V   +F  +     D  + +
Sbjct: 4   LDGINATIGDSRELFDMGKSEEDDDTILAVQADLEEVEAKVAQLEFRRMFHDPMDPTNCF 63

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +++ AGAGGTE+QDWA MLLRMYTR+AE++ FK + LE+ +GE AG+ SATL I+G  AY
Sbjct: 64  IDIQAGAGGTEAQDWAGMLLRMYTRYAERKGFKVDVLELSEGEVAGVTSATLKIEGEYAY 123

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G L+ E GVHRLVR+SP+DSN+RRHTSFSS++VYP VDDS EI+I+ +D R DTYRASGA
Sbjct: 124 GLLRTEVGVHRLVRVSPFDSNARRHTSFSSVFVYPEVDDSFEIDINPADVRTDTYRASGA 183

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQH+N TDSAVR+THIPTG+VVQCQ +RSQH+N+ +AW MLRAKLYELEL+KR E    
Sbjct: 184 GGQHINKTDSAVRLTHIPTGIVVQCQNDRSQHRNRDEAWQMLRAKLYELELKKRNEAKQA 243

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            E +KT++GWG QIRSYV      +KDLRT+ E  +   V+DGDLD F++A+L 
Sbjct: 244 LEDTKTDVGWGHQIRSYVFD-QSRIKDLRTSYEVGNIKGVMDGDLDGFIEASLK 296


>gi|298497806|ref|ZP_07007613.1| peptide chain release factor 1 [Vibrio cholerae MAK 757]
 gi|297542139|gb|EFH78189.1| peptide chain release factor 1 [Vibrio cholerae MAK 757]
          Length = 362

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 113/346 (32%), Positives = 178/346 (51%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72
            ++ V+R   +     DP +  +  + + L +E   L+      +  Q    D      +
Sbjct: 9   LESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +    E       E       I+   +  Q   L     D  + +LE+ AGAGG E+  
Sbjct: 69  AQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AEK+ ++ E +   + E  G K     + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P + ++   EI  SD +IDT+R+SGAGGQHVNTTDSA+RI
Sbjct: 189 VPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WG 309
           TH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E  KR     I ++ +  +G     
Sbjct: 249 THLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAE--ISDTRRNLLGSRDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +     ++V++GD+   +   +   +
Sbjct: 307 DRIRTYNY-PQGRVSDHRIILTVYRLTEVMEGDMQSLIDPVIHEHQ 351


>gi|330684805|gb|EGG96498.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU121]
          Length = 358

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 114/351 (32%), Positives = 186/351 (52%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +   +R   LN    DP +  +  + +   +E+  L   +   +  + +  +   
Sbjct: 1   MFDQLEIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQAELQKTVDVYRSYKSKKEELAD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
           + E+  E  D   ++   +    +K E+   +       +     D  D  +E+ A AGG
Sbjct: 61  IEEMLNETSDKEEIEMLKEESSSLKNELPEMEEQLKLLLIPKDPNDEKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L+RMY+++AE   FKTE +E+ + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLMRMYSKYAEAHHFKTEIVEVSESDHGGYKEISFSVSGNGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTGV+     E+SQ +N+ +A  +L+A+LY+++LQ  EE        K+ +G
Sbjct: 240 SAVRITHLPTGVIATSS-EKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYASQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +     S +++G+LD+ + A    ++
Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLSQIMEGNLDEIIDALTLSEQ 346


>gi|149907580|ref|ZP_01896327.1| peptide chain release factor 1 [Moritella sp. PE36]
 gi|149809250|gb|EDM69179.1| peptide chain release factor 1 [Moritella sp. PE36]
          Length = 362

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 112/346 (32%), Positives = 185/346 (53%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     +P +  +    + L +E   L+  +S  KE QD   D     E+
Sbjct: 9   LEALIERHEEVQALLGEPEIISDQDRYRALTKEYSQLEELVSCFKEYQDAKEDFESAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             +ED         +  +         +  +   L     DSN+ +LE+ AGAGG E+  
Sbjct: 69  LKDEDPDMREMAVEEYKESKATVARVSDELEVLLLPRDPNDSNNCFLEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AEK+ ++   + + + ++ G K   + ++G   +G +K E G HR+ R
Sbjct: 129 FAGDLYRMYSRYAEKKGWRLTIMNLSNSDQGGYKEVIVKMEGEAVFGTMKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P V +   I I+ +D ++DT+RASGAGGQHVN TDSAVRI
Sbjct: 189 VPETESQGRIHTSACTVVVMPEVPEVDAIVINTADLKVDTFRASGAGGQHVNKTDSAVRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG VV+CQ ERSQHKN+A+A ++L+A++   E +K         + ++ +  G   
Sbjct: 249 THIPTGTVVECQDERSQHKNRARAMSILQARIQAAEDEK--ARLEEESTRRSLVASGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+     ++V++G+LD  ++  +   +
Sbjct: 307 ERIRTYNY-PQGRVSDHRINLTLYRLNEVMEGELDVLIQPIIHEHQ 351


>gi|259503694|ref|ZP_05746596.1| peptide chain release factor RF1 [Lactobacillus antri DSM 16041]
 gi|259168326|gb|EEW52821.1| peptide chain release factor RF1 [Lactobacillus antri DSM 16041]
          Length = 362

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 107/355 (30%), Positives = 178/355 (50%), Gaps = 12/355 (3%)

Query: 9   CLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD--- 64
            +  +FD       R   LN    DP +  +      L +E   L   +    E +    
Sbjct: 2   EISEIFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKQVTQ 61

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHA 123
            + D+  +L    + D  ++ ++     +  + ++E + +   +     D  +  +E+  
Sbjct: 62  TIKDDEEMLRETDDPDLAAMTKDELAESKERQEQLEKELEVLLIPKDPNDDKNIIMEIRG 121

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
            AGG E+  +A  L  MY  +AEK+ +K E ++  + E  G K   L+I G N Y  LK 
Sbjct: 122 AAGGDEASLFAADLYNMYLHYAEKQGWKVEVVDKSETEVGGFKEIALMITGTNVYSKLKF 181

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ R+   +S  R HTS +++ V P   + ++++I   D R+D YR+SGAGGQHV
Sbjct: 182 ENGAHRVQRVPVTESAGRVHTSTATVGVMP-EAEDVDVDIDPKDIRVDVYRSSGAGGQHV 240

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L++++Y+   QK  E     +  K
Sbjct: 241 NKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYYQQK--EQNAYDKKRK 298

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             IG G    +IR+Y   P   V D R  +       ++ G+LD+ ++A +   +
Sbjct: 299 NAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMSGELDEIIEALIVADQ 352


>gi|220905560|ref|YP_002480872.1| peptide chain release factor 1 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|254790877|sp|B8J4R4|RF1_DESDA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219869859|gb|ACL50194.1| peptide chain release factor 1 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 356

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 106/345 (30%), Positives = 173/345 (50%), Gaps = 11/345 (3%)

Query: 13  LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F   +   ++   L      P ++ +  + + L +    L + +   +  +    +   
Sbjct: 1   MFAKLEGLEKKYLELEEALAQPDVFNDQDQYRKLTKAHADLSDVVELFRRHRAVSEELAE 60

Query: 72  L-LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD--SNDAYLEVHAGAGGT 128
             L L  E+ +   + +   +    +L     + + +L         +  LE+ AG GG 
Sbjct: 61  NRLLLHDEDPEIRAMAQEEVHRGEAELPNLEHELKVMLLPSDPLDEKNTILEIRAGTGGE 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMYTR+AE + +K E +     E  G K    LI G   Y  LK E G H
Sbjct: 121 EAALFAADLFRMYTRYAELKNWKVEIMSESPSENGGYKEIICLIAGDRVYSHLKFEAGTH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS +++ V P   + +++EI   D RID YRASGAGGQHVN T+S
Sbjct: 181 RVQRVPATEAQGRIHTSAATVAVMP-EAEEVDVEIRPEDLRIDIYRASGAGGQHVNKTES 239

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PT  VV CQ ERSQHKNKA+A  +L +++   E +++   + +    K ++G 
Sbjct: 240 AVRITHLPTNTVVTCQDERSQHKNKARAMKVLASRILAAERERQ--SSELSADRKAQVGS 297

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G    +IR+Y   P     D R N+   S   +++G+L+  ++A 
Sbjct: 298 GDRSERIRTYNF-PQGRCTDHRINLTLYSLDRIMEGELESLVEAL 341


>gi|300920409|ref|ZP_07136843.1| peptide chain release factor 1 [Escherichia coli MS 115-1]
 gi|300412542|gb|EFJ95852.1| peptide chain release factor 1 [Escherichia coli MS 115-1]
          Length = 360

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 178/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+      ++ +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +G   G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRGEIMSASEGGHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            R+Y   P   V D R N+      +V++G LD  ++  +   +
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 349


>gi|261491637|ref|ZP_05988220.1| peptide chain release factor 2 [Mannheimia haemolytica serotype A2
           str. BOVINE]
 gi|261494996|ref|ZP_05991465.1| peptide chain release factor 2 [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261309405|gb|EEY10639.1| peptide chain release factor 2 [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261312763|gb|EEY13883.1| peptide chain release factor 2 [Mannheimia haemolytica serotype A2
           str. BOVINE]
          Length = 304

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 161/302 (53%), Positives = 211/302 (69%), Gaps = 1/302 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L+  ++ IK ++  + D   L+ELA+E +D     E       ++ ++   +F+ + SG 
Sbjct: 2   LEQIVNTIKALEQGIEDVEGLIELAVEAEDQDTFNEAQVEADELEKKLADLEFKRMFSGP 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            DS D YL++ AG+GGTE+QDW  MLLRMY RWAE + FK E +E  DG+ AGIKSAT+ 
Sbjct: 62  HDSADCYLDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKAELMEASDGDVAGIKSATVK 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I G  AYGW + E G+HRLVR SP+D+N+ RHTSFS+ +VYP VDD I+IEI+ +D RID
Sbjct: 122 ISGDYAYGWFRTETGIHRLVRKSPFDANNGRHTSFSAAFVYPEVDDDIDIEINPADLRID 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            YRASGAGGQHVN T+SAVRITHIP+G+VVQCQ  RSQH+NK QA   L+AKLYELE+ K
Sbjct: 182 VYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNGRSQHQNKDQAMKQLKAKLYELEMSK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +       E +K++IGWG QIRSYVL     +KD RT +E  +   VLDGDLD F++A+L
Sbjct: 242 KNAEKQAMEDNKSDIGWGSQIRSYVLDD-SRIKDHRTGVEHRTTQQVLDGDLDKFVEASL 300

Query: 352 AI 353
             
Sbjct: 301 KA 302


>gi|259046347|ref|ZP_05736748.1| peptide chain release factor 1 [Granulicatella adiacens ATCC 49175]
 gi|259036984|gb|EEW38239.1| peptide chain release factor 1 [Granulicatella adiacens ATCC 49175]
          Length = 359

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 109/347 (31%), Positives = 171/347 (49%), Gaps = 12/347 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D+ + R   L+    DP +  +      L +E  +L   +   K  Q  + +   
Sbjct: 1   MFDQLDSFIIRYDELSELLSDPEVIGDTKRFMELTKEEANLRPKVETFKRYQQVVEEISD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             E+  E  D  + +   + L  +K E    +    F  L     D  +  +E+   AGG
Sbjct: 61  TEEMLGESLDAEMAEMAKEELSSLKKEKVELEDKIKFLLLPEDPNDGKNIIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  LL MY ++AE + ++ E ++ +     G K   L+I G N +  LK E G 
Sbjct: 121 DEAALFAGDLLTMYQKYAESQGWRVEVMDANVTGIGGYKEVILMITGDNVFSKLKYESGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P  ++       + D R+D Y ASGAGGQHVN T 
Sbjct: 181 HRVQRVPSTESQGRVHTSTATVVVMPEAEEVEIEL-EDKDIRVDIYHASGAGGQHVNKTA 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+VV  Q ERSQ KN+ +A  +LRA++Y+   Q  E  +    + K+ +G
Sbjct: 240 SAVRLTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYDKISQ--EAQSEYDANRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            G    +IR+Y   P   V D R  +       VL G +D+ + A +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDQVLAGKIDEIVDALI 343


>gi|223043916|ref|ZP_03613957.1| peptide chain release factor 1 [Staphylococcus capitis SK14]
 gi|222442631|gb|EEE48735.1| peptide chain release factor 1 [Staphylococcus capitis SK14]
          Length = 358

 Score =  225 bits (574), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 114/351 (32%), Positives = 183/351 (52%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +   +  + +  +   
Sbjct: 1   MFDQLDIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQADLQKTVEVYRSYKSKKEELED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
           + E+  E  D   +    +    +K E+   +       +     D  D  +E+ A AGG
Sbjct: 61  IEEMLKETSDKEEVDMLKEESASLKAELPEMEEELKILLIPKDPNDEKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L+RMY+++AE   FKTE +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLMRMYSKYAEAYGFKTEIVEASESDHGGYKEISFSVSGSGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTGV+     E+SQ +N+ +A  +L+A+LY+++LQ  EE        K+ +G
Sbjct: 240 SAVRITHLPTGVIATSS-EKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYASQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G+LD+ + A    ++
Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGNLDEIIDALTLSEQ 346


>gi|27468634|ref|NP_765271.1| peptide chain release factor 1 [Staphylococcus epidermidis ATCC
           12228]
 gi|57867593|ref|YP_189289.1| peptide chain release factor 1 [Staphylococcus epidermidis RP62A]
 gi|251812171|ref|ZP_04826644.1| peptide chain release factor 1 [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282876474|ref|ZP_06285340.1| peptide chain release factor 1 [Staphylococcus epidermidis SK135]
 gi|293366082|ref|ZP_06612770.1| peptide chain release factor RF1 [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|32171533|sp|Q8CNI7|RF1_STAES RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71153098|sp|Q5HMA4|RF1_STAEQ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|27316181|gb|AAO05315.1|AE016749_261 peptide chain release factor RF-1 [Staphylococcus epidermidis ATCC
           12228]
 gi|57638251|gb|AAW55039.1| peptide chain release factor 1 [Staphylococcus epidermidis RP62A]
 gi|251804268|gb|EES56925.1| peptide chain release factor 1 [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281294726|gb|EFA87254.1| peptide chain release factor 1 [Staphylococcus epidermidis SK135]
 gi|291319805|gb|EFE60163.1| peptide chain release factor RF1 [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329726142|gb|EGG62614.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU144]
 gi|329734173|gb|EGG70491.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU045]
 gi|329735695|gb|EGG71978.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU028]
          Length = 358

 Score =  225 bits (574), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 113/351 (32%), Positives = 186/351 (52%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +   +  + +  +   
Sbjct: 1   MFDQLDIVEERYEQLNELLSDPDVVNDADKLRKYSKEQADLQKTVDVYRSYKTKKEELQD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
           + ++  E  D   ++   +    +K E+   +       +     D  D  +E+ A AGG
Sbjct: 61  IEDMLNETSDKEEVEMLKEESSALKTELPDMEEELKILLIPKDPNDDKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L+RMY+++AE   FKTE +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLMRMYSKYAEANGFKTEIVEASESDHGGYKEVSFSVSGTGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EAEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTGV+     E+SQ +N+ +A  +L+A+LY+++LQ  EE        K+ +G
Sbjct: 240 SAVRITHLPTGVIATSS-EKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYASQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +     + +++G+LD+ ++A    ++
Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLNQIMEGNLDEIVEALTLSEQ 346


>gi|311070220|ref|YP_003975143.1| peptide chain release factor 1 [Bacillus atrophaeus 1942]
 gi|310870737|gb|ADP34212.1| peptide chain release factor 1 [Bacillus atrophaeus 1942]
          Length = 356

 Score =  225 bits (574), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 105/351 (29%), Positives = 176/351 (50%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D   +  +R   LN    DP +  +  + +   +E+  +   +   +  +D       
Sbjct: 1   MLDRLKSIEERYERLNELLSDPEVVNDPNKLREYSKEQSDISETVEVYRRYRDASEQLAD 60

Query: 72  LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +  ++ D  + +   +         +   +  +   +     D  +  +E+   AGG
Sbjct: 61  AKAMLEDKLDAEMREMVKEEISELQDETEAMTDQLKLLLVPKDPNDDKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE +E       G K   ++I G  AY  LK E G 
Sbjct: 121 EEAALFAGNLYRMYSRYAELQGWKTEIMEASVTGTGGYKEIIIMINGKGAYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P   + +E++I E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLP-EAEEVEVDIHEKDIRVDTFTSSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K+ +G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKF--QQEAQAEYDQTRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+G LD+F+ A +   +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEFVDALIMEDQ 347


>gi|154148037|ref|YP_001406088.1| peptide chain release factor 2 [Campylobacter hominis ATCC BAA-381]
 gi|238686699|sp|A7I0P7|RF2_CAMHC RecName: Full=Peptide chain release factor 2; Short=RF-2
 gi|153804046|gb|ABS51053.1| peptide chain release factor 2 [Campylobacter hominis ATCC BAA-381]
          Length = 364

 Score =  225 bits (574), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 161/354 (45%), Positives = 230/354 (64%), Gaps = 2/354 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +++ +  +      + RL+ +    +DP LW +  +A  + RE+  + N ++  K+
Sbjct: 12  ELKNKISNVEAIIKPKILMTRLAEIEKTEQDPALWVDAKKAAQIGREKTKISNILAKFKK 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            Q+ L D     ELA+ E+D   + E      ++   +   +   +LSGE D  +A + +
Sbjct: 72  AQNELNDAKEFYELAVSENDGETINELFRESAKLSENIANLELSMMLSGENDDKNAIINI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           H GAGGTE +DWA ML RMY R+ E+  +K E L+  +G+EAGIK    ++KG NAYG+L
Sbjct: 132 HPGAGGTEGEDWAGMLYRMYVRFCERVGYKIEILDFQEGDEAGIKDVNFIVKGENAYGYL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HRLVRISP+DS  RRHTSF+S+ V P +DD I+I I E D RID YR+SGAGGQ
Sbjct: 192 KVESGIHRLVRISPFDSAGRRHTSFASVVVSPELDDDIQINIDEKDLRIDYYRSSGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPT +VVQCQ +R QHKNKA A  +L+++LYELE  K++E +N  ++
Sbjct: 252 HVNKTESAVRITHIPTNIVVQCQNDRDQHKNKASAMKVLKSRLYELEKLKKQEESN--KT 309

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            K++I WG QIR+YVL PYQ VKDLR+NI  +    +LDGD+   ++  L   +
Sbjct: 310 PKSDIAWGYQIRNYVLFPYQQVKDLRSNIAYSQAEAILDGDIKKILEDVLINNQ 363


>gi|15616167|ref|NP_244472.1| peptide chain release factor 2 in translation [Bacillus halodurans
           C-125]
 gi|10176229|dbj|BAB07324.1| peptide chain release factor 2 in translation [Bacillus halodurans
           C-125]
          Length = 288

 Score =  225 bits (574), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 163/285 (57%), Positives = 206/285 (72%)

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
             +  EL  EE D  + QE    L+ +  E+   + + LL+   D N+A LE+H GAGGT
Sbjct: 1   MEVSYELCKEETDADLQQELEQGLKGLVKELNEFELQLLLNEPYDKNNAILELHPGAGGT 60

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ESQDWA+MLLRMYTRWAE + +K E L+   G+EAG+KS TLLIKG NAYG+LK E+GVH
Sbjct: 61  ESQDWASMLLRMYTRWAENKGYKVETLDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVH 120

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RLVRISP+DS+ RRHTSF S  V P +DDS+EIEIS  D +IDTYR+SGAGGQHVNTTDS
Sbjct: 121 RLVRISPFDSSGRRHTSFVSCEVMPELDDSVEIEISTEDLKIDTYRSSGAGGQHVNTTDS 180

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PT  VV CQ ERSQ KN+ +A  ML+AKL +L+L+++++        + EIGW
Sbjct: 181 AVRITHLPTNTVVTCQSERSQIKNRERAMKMLQAKLLQLKLEEQQKELAEIRGEQKEIGW 240

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           G QIRSYV  PY MVKD RTN+E  + + V+DG++D F+ A L  
Sbjct: 241 GSQIRSYVFHPYSMVKDHRTNVEVGNTNAVMDGEIDSFIDAYLRW 285


>gi|307566238|ref|ZP_07628684.1| putative peptide chain release factor 2 [Prevotella amnii CRIS
           21A-A]
 gi|307345042|gb|EFN90433.1| putative peptide chain release factor 2 [Prevotella amnii CRIS
           21A-A]
          Length = 374

 Score =  225 bits (574), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 121/359 (33%), Positives = 203/359 (56%), Gaps = 12/359 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  ++  L      D           +T+ P  W++   A+  M++ + ++  +    + 
Sbjct: 10  ILSRVESLKRYLGIDKKRIEFEEEQLRTQAPDFWESPDYARQQMKKVKEIERWVKGYDKA 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + +  +  +  +     D      E      ++   +E  + +++L  E D  +  ++++
Sbjct: 70  KAQAEELQLAFDFYK--DKLVTEDEVDTMYNKVVSTIEDLELKNMLRQEEDPMECVMKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PNAYGWL 181
           +GAGGTESQDWA ML+RMY RW E   +K    +I  G+EAGIKS T+  +    AYG+L
Sbjct: 128 SGAGGTESQDWAEMLMRMYMRWGEAHGYKVTISDILSGDEAGIKSVTMKFESGEYAYGYL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SP+++  +R TSF+S++V P+VDD+IE+ +  +    DT+R+SGAGGQ
Sbjct: 188 KSENGVHRLVRVSPFNAQGKRMTSFASVFVTPLVDDTIEVYVDPARVSWDTFRSSGAGGQ 247

Query: 242 HVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  +S VR+ +            ++++  + R Q KN+A+A  +L+++LY  E++KR 
Sbjct: 248 NVNKVESGVRLRYQYEDPDTGEKEEILIENTETRDQPKNRAKAMQLLKSQLYNREMKKRM 307

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           E     E++K +I WG QIRSYV    + VKD RTN + +    V++G +DDF+KA L 
Sbjct: 308 EAQAKVEAAKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVEGVMNGKIDDFIKAYLM 365


>gi|296113010|ref|YP_003626948.1| peptide chain release factor 1 [Moraxella catarrhalis RH4]
 gi|295920704|gb|ADG61055.1| peptide chain release factor 1 [Moraxella catarrhalis RH4]
 gi|326560389|gb|EGE10771.1| peptide chain release factor 1 [Moraxella catarrhalis 7169]
 gi|326561241|gb|EGE11604.1| peptide chain release factor 1 [Moraxella catarrhalis 46P47B1]
 gi|326564062|gb|EGE14306.1| peptide chain release factor 1 [Moraxella catarrhalis 12P80B1]
 gi|326565872|gb|EGE16034.1| peptide chain release factor 1 [Moraxella catarrhalis BC1]
 gi|326570557|gb|EGE20597.1| peptide chain release factor 1 [Moraxella catarrhalis BC8]
 gi|326573200|gb|EGE23169.1| peptide chain release factor 1 [Moraxella catarrhalis CO72]
 gi|326576112|gb|EGE26028.1| peptide chain release factor 1 [Moraxella catarrhalis 101P30B1]
 gi|326577062|gb|EGE26956.1| peptide chain release factor 1 [Moraxella catarrhalis O35E]
          Length = 359

 Score =  225 bits (574), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 171/341 (50%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   +     DP    +  + + L  E   L    +  ++      D     EL
Sbjct: 9   LDQMVDRFEEVTALLSDPDTISDNKKFRELSMEHSDLSEITTTWQDFVQAEADLQTANEL 68

Query: 76  ALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   +   E       I+   E      L     D   A+LE+ AG GG E+  ++
Sbjct: 69  LSDPEMKEMALDEIEVARANIETLEERLNVMMLPKDPNDKATAFLEIRAGTGGDEAAIFS 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY ++ + + ++ E L  ++GE  G K     + G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYQKYTQSQGWQVEVLSANEGEHGGYKEIIARVSGIGVYGRLKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P V+    +EI+ SD RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 ATESQGRVHTSACTVAVMPEVEIDDTVEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTGVV +CQQERSQH NK +A  ML A++ + ++Q   +I    +  +  +G G    +
Sbjct: 249 IPTGVVAECQQERSQHANKEKAMKMLVARIQQAKVQ--AQIDATSDMRRNLVGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       +++GDL + + + L 
Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSLLR 346


>gi|115350468|ref|YP_772307.1| peptide chain release factor 1 [Burkholderia ambifaria AMMD]
 gi|170703671|ref|ZP_02894403.1| peptide chain release factor 1 [Burkholderia ambifaria IOP40-10]
 gi|172059501|ref|YP_001807153.1| peptide chain release factor 1 [Burkholderia ambifaria MC40-6]
 gi|122324144|sp|Q0BIQ0|RF1_BURCM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238689166|sp|B1YSD5|RF1_BURA4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|115280456|gb|ABI85973.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia
           ambifaria AMMD]
 gi|170131417|gb|EDT00013.1| peptide chain release factor 1 [Burkholderia ambifaria IOP40-10]
 gi|171992018|gb|ACB62937.1| peptide chain release factor 1 [Burkholderia ambifaria MC40-6]
          Length = 360

 Score =  225 bits (574), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 119/346 (34%), Positives = 177/346 (51%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72
            D    RL+ LN      ++  ++ + + L RE   L   +      +    D      L
Sbjct: 9   LDQLSTRLAELNDLLSRENVTADLDQYRRLTREHAELGPVVEQYALWRQSRNDETAAQEL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L  A   D       ++            K          D  + +LE+ AGAGG ES  
Sbjct: 69  LADASMRDFAEDEIRSARERMVRLEAELQKMLL--PKDPNDDRNIFLEIRAGAGGDESAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R
Sbjct: 127 FAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV+CQ +RSQHKNK +A  +L A++ +   Q  E+ A    + K+ IG G   
Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N+       ++DGDLD+ + A +   +
Sbjct: 305 ERIRTYNF-PQGRMTDHRINLTLYRLEALMDGDLDELIGALVTEHQ 349


>gi|326796200|ref|YP_004314020.1| peptide chain release factor 1 [Marinomonas mediterranea MMB-1]
 gi|326546964|gb|ADZ92184.1| Peptide chain release factor 1 [Marinomonas mediterranea MMB-1]
          Length = 362

 Score =  225 bits (573), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 114/348 (32%), Positives = 181/348 (52%), Gaps = 9/348 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
           F  ++  +R   L     +  +  +    +   +E   L+  +   +E Q  L +     
Sbjct: 7   FKLESLAERYEELAALLSEADVIMDQNLFRNYSKEYSELEPVVKCFEEYQVVLENLEEAQ 66

Query: 74  ELALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            +  + D         +     ++ +  +   Q   L     DS + +LEV AG GG E+
Sbjct: 67  LMLTDSDPDIKEMGQEELKSGNEQKETLLLDLQKLLLPKDPNDSKNVFLEVRAGTGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             ++  L RMY+R+AE +++K E +  ++GE  G K     I G  AY  LK E G HR+
Sbjct: 127 SIFSGDLFRMYSRYAETQRWKVEIVSANEGEHGGYKEIIARIVGEGAYSKLKFESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ V P +D+  +I+I+++D RIDT+RASGAGGQHVN TDSA+
Sbjct: 187 QRVPATESQGRIHTSACTVAVMPEMDEVSDIDINKADLRIDTFRASGAGGQHVNKTDSAI 246

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PTGVVV+CQ ERSQHKN+A+A  +L ++L   E    +  A   E+ ++ +G G 
Sbjct: 247 RIVHLPTGVVVECQDERSQHKNRAKAMALLASRLKAAEE--DKAAAEQSETRRSLVGTGD 304

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+      +++ GDLD  +   +   +
Sbjct: 305 RSDRIRTYNY-PQGRVTDHRINLTLYKLDEIVAGDLDVLVGPLVNEHQ 351


>gi|303249514|ref|ZP_07335721.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307251860|ref|ZP_07533761.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307256355|ref|ZP_07538138.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|302651588|gb|EFL81737.1| peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306860552|gb|EFM92564.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306865181|gb|EFM97081.1| Peptide chain release factor 2 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
          Length = 301

 Score =  225 bits (573), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 157/299 (52%), Positives = 214/299 (71%), Gaps = 1/299 (0%)

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
            ++ I+ +   + D   L+ELA+E +D     E       ++ ++   +F+ + SG+ D+
Sbjct: 2   VVNTIRTLDQGVEDVEGLIELAVEAEDEDTFNEAQVEANELEEKLAKLEFQRMFSGQHDA 61

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
            D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ I G
Sbjct: 62  ADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATVKITG 121

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP +DD I+IEI+ +D RID YR
Sbjct: 122 EYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEIDDDIDIEINLADLRIDVYR 181

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASGAGGQHVN T+SAVRITHIP+G+VVQCQ  RSQH+NK Q    L+AKLYE+E+ K+  
Sbjct: 182 ASGAGGQHVNKTESAVRITHIPSGIVVQCQNGRSQHQNKDQCMKQLKAKLYEMEMMKKNA 241

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
              + E SK++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 242 EKQVMEESKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKFIEASLKA 299


>gi|299821847|ref|ZP_07053735.1| peptide chain release factor RF1 [Listeria grayi DSM 20601]
 gi|299817512|gb|EFI84748.1| peptide chain release factor RF1 [Listeria grayi DSM 20601]
          Length = 358

 Score =  225 bits (573), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 109/347 (31%), Positives = 179/347 (51%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72
             +   R   LN    DP +  +    + L +E+  +   +   ++ +   D++ +   L
Sbjct: 5   LQSVENRYEELNELLSDPDVVSDPKRLRDLSKEQSSISQTVETYRDYKEVTDQIAETKEL 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L   L++D   + +E  + LQ  K    E  +   +     D  +  +E+   AGG E+ 
Sbjct: 65  LNEKLDDDMREMAKEELNELQENKTHLEEKLKLLLVPKDPNDDKNVIMEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE R +K E ++ +     G K   ++I G  A+  LK E G HR+ 
Sbjct: 125 LFAGDLFRMYSRYAESRGWKAEIMDANPTGIGGYKEVIVMINGDGAFSRLKYENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P   + +EI+I + D R DT+ ++GAGGQ VNTT SAVR
Sbjct: 185 RVPETESGGRIHTSTATVAILP-EAEDVEIDIQDKDIRTDTFASTGAGGQSVNTTMSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+    +RE       + K+ +G G  
Sbjct: 244 LTHIPTGIVVSMQDERSQIKNKEKAMKVLRARIYDKF--EREAREEYDANRKSAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       V++G +D+ + A +   +
Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQVMEGKIDEIIDALIVEDQ 347


>gi|291550769|emb|CBL27031.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus
           torques L2-14]
          Length = 320

 Score =  225 bits (573), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 145/310 (46%), Positives = 214/310 (69%), Gaps = 1/310 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL-QRIKLEVEYKQF 104
           M+E + L +++  I ++     D L+L+E++  ED+     E  +      +   E  + 
Sbjct: 1   MKELKGLQDSVKEIDKLFTDYEDMLLLIEMSEGEDEEQEAAEEIEEELGTFEEVFEKLRI 60

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
            +LL G  D+++A + +HAGAGGTE+ DW  ML RMY+RWAEK+ ++ E L+  +G+ AG
Sbjct: 61  STLLIGPYDADNAIVTLHAGAGGTEAMDWTGMLYRMYSRWAEKKGYEVEMLDYLEGDVAG 120

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IK  T  +KG NAYG+L+ E+GVHRLVRISP+++N +R TSF+S  V P +++ I+IEI+
Sbjct: 121 IKGVTFEVKGENAYGYLRSEKGVHRLVRISPFNANGKRQTSFASCDVIPDIEEDIDIEIN 180

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           + D R+DTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQH NK +A  ML++KL
Sbjct: 181 DDDIRVDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQHMNKDKAMQMLKSKL 240

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           Y L+ Q++ E  +       +I +G QIRSYV+QPY +VKD RTN E ++   V+DG++D
Sbjct: 241 YVLKQQEQAEKMSDIRGEVRDINFGNQIRSYVMQPYTLVKDHRTNAEISNVGAVMDGNID 300

Query: 345 DFMKATLAIK 354
            F+ A L++ 
Sbjct: 301 PFINAYLSMD 310


>gi|255037851|ref|YP_003088472.1| peptide chain release factor 1 [Dyadobacter fermentans DSM 18053]
 gi|254950607|gb|ACT95307.1| peptide chain release factor 1 [Dyadobacter fermentans DSM 18053]
          Length = 357

 Score =  225 bits (573), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 107/346 (30%), Positives = 180/346 (52%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   ++ +   P +  +      + +E + L   +      Q    D     EL
Sbjct: 5   LEAIKERFEEVSQQIIQPEVVSDSTRYSKISKEYKDLGRIVEQYALYQKLQKDIAGTKEL 64

Query: 76  ALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L     +++   +  +   +     DS +  LE+  G GG E+ 
Sbjct: 65  IATEKDEDLREMAKEELDDLLPKLEELEQNIKELLIPKDPNDSRNIILEIRGGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+ EK  +++  ++  +G   G K     ++G + YG +K E GVHR+ 
Sbjct: 125 IFAGDLFRMYQRFIEKMGWRSSVMDYTEGTNGGYKEIICKVEGEDVYGKMKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +S+ V P   + ++++I+ +D RIDT+++SGAGGQ VNTT SAVR
Sbjct: 185 RVPATESQGRIHTSAASVAVLP-EAEEVDVQINMNDVRIDTFQSSGAGGQSVNTTYSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +THIP+G+VV CQ ERSQ KNK +A ++LR++LYE+EL+K  +   I    K+ +G G +
Sbjct: 244 LTHIPSGLVVSCQDERSQLKNKDRALSVLRSRLYEIELKKHND--AISSQRKSMVGSGDR 301

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              IR+Y   P   + D R      +   V++GD+ D ++     +
Sbjct: 302 SDKIRTYNY-PQSRITDHRIGYTVYNLPAVMEGDIADLIEKLRIAE 346


>gi|317133626|ref|YP_004092940.1| peptide chain release factor 1 [Ethanoligenens harbinense YUAN-3]
 gi|315471605|gb|ADU28209.1| peptide chain release factor 1 [Ethanoligenens harbinense YUAN-3]
          Length = 356

 Score =  225 bits (573), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 113/350 (32%), Positives = 184/350 (52%), Gaps = 11/350 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  ++   R + +  +   P    +      LMRE + L   +      Q    D + 
Sbjct: 1   MFEQLEDTCSRYTEIAARLSQPDALADRAAYAKLMREHKQLTPLVEAYHAYQQATADEME 60

Query: 72  LLELALEED---DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
             EL    D        +E +D     +   +      L     D  +  +E+ AGAGG 
Sbjct: 61  ARELLENGDADLRALAAEELADARAEKERLEQKLHLLLLPRDPNDEKNVIIEIRAGAGGE 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+ +AE+R +K E L +++ E  G+K  + +++G  AY  LK E GVH
Sbjct: 121 EAALFAAELFRMYSMYAERRGWKAETLNMNETELGGMKEISCMVEGEGAYSRLKFESGVH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS  ++ V P   + +E++I+  D RIDT+R+SGAGGQH+N T+S
Sbjct: 181 RVQRVPETEAGGRIHTSTVTVAVLP-EAEDVEVDIAPEDLRIDTFRSSGAGGQHINKTES 239

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           A+RITH+PTG+VV+CQ ERSQHKN+ +A  +LR++L +     ++E   I  + +T++G 
Sbjct: 240 AIRITHLPTGLVVECQDERSQHKNRDRAMKVLRSRLLDRAQSAQDEE--IATTRRTQVGT 297

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G    +IR+Y   P   V D R  +       VL G+LD+ +   +   +
Sbjct: 298 GDRSERIRTYNF-PQGRVTDHRIGLTLYHLDAVLSGNLDEVIDPLITADQ 346


>gi|189502103|ref|YP_001957820.1| peptide chain release factor 1 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|238692309|sp|B3ES89|RF1_AMOA5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189497544|gb|ACE06091.1| hypothetical protein Aasi_0702 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 355

 Score =  225 bits (573), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 112/346 (32%), Positives = 179/346 (51%), Gaps = 12/346 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  +   ++   ++ +  DP +  ++ +   L +  + L   +      +  L +   
Sbjct: 1   MIDKLEAIEKKYEEVSKQIVDPSIMADMKQYASLNKTYKELSKIVDVYTVYKSNLANLES 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
              L   E D +      + +  ++L+    +    F  L     DS +  LE+ AG GG
Sbjct: 61  AKTLLSIEKDAAFRDLAKEEIDSLELQKTQLEEDLKFLLLPKDPNDSKNVILEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AEK ++K   +E  +    G K     I G  AYG LK E GV
Sbjct: 121 DEAGIFAGDLFRMYSRFAEKMQWKLSIIEEVESTSGGYKEIICSIAGEGAYGMLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +S+ V P   D +E+++  +D R DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPATETQGRIHTSAASVVVLP-EMDEVEVDLDMNDIRKDTFCSSGPGGQSVNTTY 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SA+R+THIPTG+VV CQ E+SQ KN  +A  +LRA+LYE EL+K+++   IG   ++ + 
Sbjct: 240 SAIRLTHIPTGIVVSCQDEKSQIKNLEKALKVLRARLYEQELKKQQD--AIGAERRSMVK 297

Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            G +   IR+Y   P   V D R      +   V+DG + D ++A 
Sbjct: 298 SGDRSDKIRTYNF-PQGRVTDHRIGYTIHNLPAVMDGAVGDLIEAL 342


>gi|78187994|ref|YP_378332.1| peptide chain release factor 1 [Chlorobium chlorochromatii CaD3]
 gi|119361520|sp|Q3AUE2|RF1_CHLCH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78170193|gb|ABB27289.1| bacterial peptide chain release factor 1 (bRF-1) [Chlorobium
           chlorochromatii CaD3]
          Length = 357

 Score =  225 bits (573), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 107/352 (30%), Positives = 175/352 (49%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D      ++   L     DP L  +    + L RE  +L   +      Q +  +   
Sbjct: 1   MLDKLQAIKEKHLDLEQALSDPSLANDQERFRKLNREYSNLREVVQAFDAYQRKATELEA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
              L   E D  +       +  ++  V   +       L   EADS +  +E+ AG GG
Sbjct: 61  AQHLLATESDTEMKALAEAEVDELQETVAELEQGLKILLLPKEEADSRNVIIEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNAYGWLKGEQG 186
            E+  +A  L RMY R+AE++ ++ + L+ ++     G K   L I G N +G +K E G
Sbjct: 121 DEASLFAADLTRMYQRYAEQKGWQYKVLDYNESSVPGGFKEMILEISGNNVFGTMKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS  S+ V P   + +++EI   D R DTYR+ G GGQ+VN  
Sbjct: 181 VHRVQRVPDTEAQGRIHTSAVSVAVLP-EAEEVDVEIRRDDLRFDTYRSGGKGGQNVNKV 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++AVRITH+PTG+V  CQ+ERSQ +NK +A  MLR KLY+++L ++++        +T +
Sbjct: 240 ETAVRITHMPTGIVAACQEERSQLQNKERAMQMLRTKLYDIQLAEQQQQRADL--RRTMV 297

Query: 307 GWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             G +   IR+Y   P   V D R      +   ++ G+L + ++A +   +
Sbjct: 298 ATGDRSAKIRTYNY-PQSRVTDHRIGFTSHALPQIMQGELHEVIEALIMHDQ 348


>gi|320174901|gb|EFW50020.1| Peptide chain release factor 1 [Shigella dysenteriae CDC 74-1112]
          Length = 360

 Score =  225 bits (573), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 114/344 (33%), Positives = 179/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+      ++ +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQDELRKAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGCLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            R+Y   P   V D R N+      +V++G LD  ++  +   +
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 349


>gi|88192214|pdb|2B3T|B Chain B, Molecular Basis For Bacterial Class 1 Release Factor
           Methylation By Prmc
          Length = 360

 Score =  225 bits (573), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 179/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+      ++ +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + D+   +++ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDVNPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            R+Y   P   V D R N+      +V++G LD  ++  +   +
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 349


>gi|34763568|ref|ZP_00144503.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|237742325|ref|ZP_04572806.1| peptide chain release factor 1 [Fusobacterium sp. 4_1_13]
 gi|256845604|ref|ZP_05551062.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_36A2]
 gi|294785107|ref|ZP_06750395.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_27]
 gi|27886757|gb|EAA23895.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|229429973|gb|EEO40185.1| peptide chain release factor 1 [Fusobacterium sp. 4_1_13]
 gi|256719163|gb|EEU32718.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_36A2]
 gi|294486821|gb|EFG34183.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_27]
          Length = 357

 Score =  225 bits (573), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 122/351 (34%), Positives = 183/351 (52%), Gaps = 11/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +  V R   LN     P +  +  +     +    +   +   KE +  + D   
Sbjct: 1   MFDKLEEVVARYDELNKMLVSPEVLADSKKMIECNKAINEITEIVEKYKEYKKYVDDIEF 60

Query: 72  LLELALEEDDCSILQE----TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + E    E D  + +       +  +++    E  +   L   + D  +  +E+ AGAGG
Sbjct: 61  IKESFKTEKDSDMKEMLNEELKEAEEKLPKLEEELKILLLPKDKNDDKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE++K+K E +E  DGE  GIK     I G  AY  LK E GV
Sbjct: 121 DEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELGGIKEIAFTIIGLGAYSRLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +++ R HTS +++ V P V+D  E+ +   D +IDTYRA GAGGQHVN TD
Sbjct: 181 HRVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVIVDPKDLKIDTYRAGGAGGQHVNMTD 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VVQCQ ERSQ KN+ +A   L  KLYE+E +K+          + ++G
Sbjct: 241 SAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQRSEVE--SERRLQVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   + D R  +        LDGD+D+ + A +   +
Sbjct: 299 TGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQ 348


>gi|152986475|ref|YP_001350646.1| peptide chain release factor 1 [Pseudomonas aeruginosa PA7]
 gi|166223587|sp|A6VC61|RF1_PSEA7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|150961633|gb|ABR83658.1| peptide chain release factor 1 [Pseudomonas aeruginosa PA7]
          Length = 360

 Score =  225 bits (573), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 113/342 (33%), Positives = 173/342 (50%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  I   ++ +    D      L
Sbjct: 9   LDVLSDRYEELTALLGDAEVISDQTRFRAYSREYAEVEPVILAFRDYRKVQADLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +  +  +      +  Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LKDSDPELRDLAEEEVAEARERLAALGDSLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AE++ ++ E L  ++GE  G K     ++G N Y  LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAERQGWRVETLSENEGEHGGYKEVIARVEGENVYAKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSAVRI
Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQHVNKTDSAVRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+P+G+VV+CQ+ERSQHKN+A+A   L AKL + +         I  + K  +G G   
Sbjct: 249 THLPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQ--AAAQQAIASTRKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +IR+Y   P   V D R N+   S  +V++G ++  ++  L
Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYSLGEVMEGAVEQVIEPLL 347


>gi|303256163|ref|ZP_07342179.1| peptide chain release factor 1 [Burkholderiales bacterium 1_1_47]
 gi|331001217|ref|ZP_08324843.1| peptide chain release factor 1 [Parasutterella excrementihominis
           YIT 11859]
 gi|302860892|gb|EFL83967.1| peptide chain release factor 1 [Burkholderiales bacterium 1_1_47]
 gi|329568944|gb|EGG50740.1| peptide chain release factor 1 [Parasutterella excrementihominis
           YIT 11859]
          Length = 360

 Score =  225 bits (573), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 180/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               V+RL  ++   +DP +  N+ + + L +ER  ++  +   KE +    D     E+
Sbjct: 9   LTQLVRRLEEIDQNLQDPDVTSNMDQFRALSKERAEIEPVVLKAKEYEQAEEDLAAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +E+      E     ++ I+      +   L     D  + YLE+ AG GG ES  +A
Sbjct: 69  LSDEEMKEFASEEIKATKKAIEQISSELEILLLPKDPNDEKNIYLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE++K++ E +     +  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAERQKWQVEFVSASPSDLGGYKEIVVKIVGQGAYSKLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D+  ++ I  S+ RID YRASGAGGQH+  T+SAVRITH
Sbjct: 189 ETESQGRVHTSACTVAVLPEADEIGDVVIDPSELRIDVYRASGAGGQHIQKTESAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNK +A  +L ++++  ++ + +  A      K+ IG G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKERAMGVLISRIHAAQVAEVQ--AKESSMRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       ++DGDLD  +       +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLYKLDSIMDGDLDCLISPLTTEHQ 349


>gi|42527989|ref|NP_973087.1| peptide chain release factor 1 [Treponema denticola ATCC 35405]
 gi|81570139|sp|Q73JU6|RF1_TREDE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|41819034|gb|AAS13006.1| peptide chain release factor 1 [Treponema denticola ATCC 35405]
          Length = 361

 Score =  225 bits (573), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 119/347 (34%), Positives = 182/347 (52%), Gaps = 12/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            DN  +RL  +  + E+P+L ++V + K  MRE  +L   +                  L
Sbjct: 5   LDNLRKRLVEVEKEVENPNLIKDVAKYKETMREHSYLSKLMEEYDNYLSIEKQIEDSKLL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  + +   + L  ++   E  +       +     +  +  +E+  G GG E+ 
Sbjct: 65  IQEESDAELKEMAREELHSLEAAFEKSEADLKMLLIPPDPLEEKNIIMEIRGGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYT +AE + +K E L +++ E  G K  T  I G   YG L+ E GVHR+ 
Sbjct: 125 LFAADLFRMYTHYAEMKNWKYEVLSLNETELGGYKEITFSISGKYVYGSLRYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   + + R HTS  ++ V P  +++    I++ D RID  RA G GGQ VNTTDSAVR
Sbjct: 185 RVPETEGSGRIHTSAVTVAVLPEAEETEIE-INQEDLRIDVMRAGGPGGQCVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV CQ E+SQ KNKA+A  +LR++LY+LE  K++      ++ K+++G G  
Sbjct: 244 ITHIPTGLVVICQDEKSQIKNKAKAMRVLRSRLYDLEESKKQAER--AQNRKSQVGSGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA-TLAIK 354
             +IR+Y   P   V D R N+       V+ G LD+ + A  +A +
Sbjct: 302 SERIRTYNF-PQNRVTDHRINLTLYKLDAVMQGSLDELIDALCIAAR 347


>gi|293606108|ref|ZP_06688473.1| peptide chain release factor RF2 [Achromobacter piechaudii ATCC
           43553]
 gi|292815563|gb|EFF74679.1| peptide chain release factor RF2 [Achromobacter piechaudii ATCC
           43553]
          Length = 300

 Score =  225 bits (573), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 157/298 (52%), Positives = 216/298 (72%), Gaps = 1/298 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  +  +   L D   L ELA  +DD S L+    +    + ++E  +F  + S  AD  
Sbjct: 2   VETLTSLGTGLADANELFELAKADDDDSTLESIEKDADAFQEKLENLEFRRMFSNPADPL 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           + +L++ AGAGGTE+QDWA+MLLR Y R+AE++ FK E LE  +G+ AGIKSAT+ ++G 
Sbjct: 62  NCFLDIQAGAGGTEAQDWASMLLRQYLRYAERKGFKVEVLEESEGDVAGIKSATIKMEGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+G+L+ E GVHRLVR SP+DS+  RHTSF+S++VYP VD+S E+E++ +D R+DTYRA
Sbjct: 122 YAFGYLRTETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRVDTYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQH+N TDSAVR+THIPTG+VVQCQ +RSQH+N+A+A  ML++KLYELE++ R   
Sbjct: 182 SGAGGQHINKTDSAVRLTHIPTGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMAE 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
               E SKT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 242 QQKLEDSKTDVGWGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQ 298


>gi|227538599|ref|ZP_03968648.1| peptide chain release factor 1 [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227241518|gb|EEI91533.1| peptide chain release factor 1 [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 357

 Score =  225 bits (573), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 98/346 (28%), Positives = 173/346 (50%), Gaps = 12/346 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D      +R   +  +  +P    ++     L +E + L   +      ++ + +   
Sbjct: 1   MLDKLQAIKERWQEVEAELSNPDTISDMKRFAKLNKEYKDLGKIVDQYHIYKNMVSNIDA 60

Query: 72  LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             ++   E D  + +   +       + + + E  +   +     D+ +A +E+  G GG
Sbjct: 61  NKDILANEKDQELREMAKEELDILYGQKEEKEEEIRLMLIPKDPEDAKNAIIEIRGGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+ E + ++ E +++ +G   G K   L + G +AYG LK E GV
Sbjct: 121 DEAALFAGDLYRMYTRFFETKGWRNEVMDVTEGTSGGYKEVILKVIGDDAYGQLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +S+ V P   + +++E++  D  + T R+ GAGGQ+VN  +
Sbjct: 181 HRVQRVPDTETQGRVHTSAASVAVLP-EAEDVDVELNPGDIEMQTSRSGGAGGQNVNKVE 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           + V++TH P+G+VV CQ ERSQ  N+  A  MLR KLYELE+QK+    +     KT + 
Sbjct: 240 TKVQLTHKPSGIVVVCQVERSQLANRELAMEMLRNKLYELEVQKK--HGDTAAKRKTMVS 297

Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            G +   +R+Y   P   V + R  +   +   V+DGD+   + A 
Sbjct: 298 TGDRSAKVRTYNY-PQGRVTEHRIGLTLYNLPAVMDGDIQGIIDAL 342


>gi|296331340|ref|ZP_06873812.1| peptide chain release factor 1 [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305676326|ref|YP_003867998.1| peptide chain release factor 1 [Bacillus subtilis subsp. spizizenii
           str. W23]
 gi|296151455|gb|EFG92332.1| peptide chain release factor 1 [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305414570|gb|ADM39689.1| peptide chain release factor 1 [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 356

 Score =  225 bits (573), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 107/351 (30%), Positives = 178/351 (50%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D   +  +R   LN    DP +  +  + +   +E+  +   +   ++ +D       
Sbjct: 1   MLDRLKSIEERYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVDVYRQYRDASEQLAD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +  E+ D  +     + +  ++ E     E  +   +     D  +  +E+   AGG
Sbjct: 61  AKAMLEEKLDAEMRDMVKEEISELQKETETLSERLKVLLIPKDPNDDKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE +E       G K    +I G  AY  LK E G 
Sbjct: 121 EEAALFAGNLYRMYSRYAELQGWKTEVMEASVTGTGGYKEIIFMITGSGAYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P   + +E++I E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLP-EAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K+ +G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKF--QQEAQAEYDQTRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+G LD+ ++A +   +
Sbjct: 298 SGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQ 347


>gi|324113971|gb|EGC07945.1| peptide chain release [Escherichia fergusonii B253]
          Length = 360

 Score =  225 bits (573), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 114/344 (33%), Positives = 179/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+      ++ +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEGRRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            R+Y   P   V D R N+      +V++G LD  ++  +   +
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 349


>gi|239637411|ref|ZP_04678393.1| peptide chain release factor 1 [Staphylococcus warneri L37603]
 gi|239597011|gb|EEQ79526.1| peptide chain release factor 1 [Staphylococcus warneri L37603]
          Length = 358

 Score =  225 bits (573), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 115/351 (32%), Positives = 185/351 (52%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +   +R   LN    DP +  +  + +   +E+  L   +   +  + +  +   
Sbjct: 1   MFDQLEIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQAELQKTVDVYRSYKSKKEELAD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
           + E+  E  D   ++   +    +K E+   +       +     D  D  +E+ A AGG
Sbjct: 61  IEEMLNETSDKEEIEMLKEESSSLKNELPEMEEQLKLLLIPKDPNDEKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L+RMY+++AE   FKTE +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLMRMYSKYAEAHNFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTGV+     E+SQ +N+ +A  +L+A+LY+++LQ  EE        K+ +G
Sbjct: 240 SAVRITHLPTGVIATSS-EKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYASQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +     S +L+G+LD+ + A    ++
Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLSQILEGNLDEIIDALTLSEQ 346


>gi|238756935|ref|ZP_04618123.1| Peptide chain release factor 1 [Yersinia aldovae ATCC 35236]
 gi|238704765|gb|EEP97294.1| Peptide chain release factor 1 [Yersinia aldovae ATCC 35236]
          Length = 360

 Score =  225 bits (573), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 118/337 (35%), Positives = 175/337 (51%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     KE +    D      +
Sbjct: 9   LEALQERHEEVLAHLGDASVIADQDRFRALSREYAQLTDVTHCFKEWRSMQDDIDAAEMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE       R +   +  Q   L     D  D +LE+ AG GG E+  +A
Sbjct: 69  LEDPEMREMAQEELKEAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             + RMY+R+AE R++K E +   DGE  G K     + G   YG LK E G HR+ R+ 
Sbjct: 129 GDMFRMYSRYAEARRWKVEIMSASDGEHGGYKEVIAKVSGDGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR+    +    +  +G G    +
Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQ--LAVASERRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQ 342


>gi|148653259|ref|YP_001280352.1| peptide chain release factor 1 [Psychrobacter sp. PRwf-1]
 gi|172048528|sp|A5WFG1|RF1_PSYWF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|148572343|gb|ABQ94402.1| bacterial peptide chain release factor 1 (bRF-1) [Psychrobacter sp.
           PRwf-1]
          Length = 364

 Score =  225 bits (573), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 179/347 (51%), Gaps = 10/347 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   +     DP    +  + + L  E   L    +  +  +    D     E+
Sbjct: 9   LDQMVDRFEEVTALLSDPDTISDNNKFRELSMEHSELSEITALWQRYRQAEIDKKDAQEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +   + +     ++E  + E     L     D   A+LE+ AG GG E+ 
Sbjct: 69  INDASDPDMKEMMQEEIDSASRDIEAMEEELNVMMLPKDPNDKVPAFLEIRAGTGGDEAA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY R+A  + +  E L  ++GE  G K     + G + YG LK E G HR+ 
Sbjct: 129 IFSGDLFRMYERYASSQGWTIEVLSANEGEHGGYKEIISRVSGNDVYGRLKFESGAHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V+    +E++ +D R+DT+R+SGAGGQHVNTTDSAVR
Sbjct: 189 RVPETESQGRVHTSACTVAVMPEVEIDDTVELNPADIRMDTFRSSGAGGQHVNTTDSAVR 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTGVV +CQQERSQHKN+A+A  ML A++ + ++Q++ + A+     +  +G G  
Sbjct: 249 LTHIPTGVVAECQQERSQHKNRAKAMQMLIARIQQAKVQEQVDTADAL--RRNLVGSGDR 306

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R N+       +++GDL + + A     +
Sbjct: 307 SERIRTYNF-PQGRMTDHRINLTLYKLDAIMEGDLTELLDALNREHQ 352


>gi|170761198|ref|YP_001785468.1| peptide chain release factor 1 [Clostridium botulinum A3 str. Loch
           Maree]
 gi|238688740|sp|B1KSR1|RF1_CLOBM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169408187|gb|ACA56598.1| peptide chain release factor 1 [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 358

 Score =  225 bits (573), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 125/347 (36%), Positives = 195/347 (56%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    +   L+ K  DP +  N  E + L +E   L+  ++  +E +    D     E+
Sbjct: 5   LNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLESDKEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  + +   + ++ + L++E  +       L     D  D ++E+ AGAGG E+ 
Sbjct: 65  LKEESDKELREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A+ LLRMYTR+AE++ +K E + ++  +  G K  T+ +KG  AY  LK E GVHR+ 
Sbjct: 125 LFASNLLRMYTRYAERKNWKVETISLNATDIGGFKEVTVAVKGKGAYSRLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P   D ++I I+ +D RID YRASG GGQ VNTTDSAVR
Sbjct: 185 RVPDTESSGRIHTSTATVAVLP-EVDDVDININANDLRIDVYRASGHGGQCVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ E+SQ KNK +A  +L+A+L+E      E  A+I E  K+++G G  
Sbjct: 244 ITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAE--AERAASIAEDRKSQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R  +        LDGD+D+ ++A +   +
Sbjct: 302 SERIRTYNY-PQGRITDHRIGLTLYKLETFLDGDIDEAIEALVTEDQ 347


>gi|15801440|ref|NP_287457.1| peptide chain release factor 1 [Escherichia coli O157:H7 EDL933]
 gi|12514924|gb|AAG56069.1|AE005338_9 peptide chain release factor RF-1 [Escherichia coli O157:H7 str.
           EDL933]
          Length = 360

 Score =  225 bits (573), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 114/344 (33%), Positives = 179/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSPCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+      ++ +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            R+Y   P   V D R N+      +V++G LD  ++  +   +
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 349


>gi|261867765|ref|YP_003255687.1| peptide chain release factor 2 [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261413097|gb|ACX82468.1| peptide chain release factor 2 [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 300

 Score =  225 bits (573), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 168/298 (56%), Positives = 217/298 (72%), Gaps = 1/298 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           ++ IK ++  L D   LLELA+E  D     E    L  ++ ++E  +F  + SGE D+ 
Sbjct: 2   VNTIKNLEQGLEDVDGLLELAVEAGDEDTFNEAITELNALEQQLEKLEFRRMFSGEHDAC 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G 
Sbjct: 62  DCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRA
Sbjct: 122 YAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN T+SAVRITHIP+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+   
Sbjct: 182 SGAGGQHVNKTESAVRITHIPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNAD 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
               E +K++IGWG QIRSYVL     +KDLRT IE  +   VLDGDLD F++A+L  
Sbjct: 242 KQAMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDRFIEASLKA 298


>gi|302879738|ref|YP_003848302.1| peptide chain release factor 1 [Gallionella capsiferriformans ES-2]
 gi|302582527|gb|ADL56538.1| peptide chain release factor 1 [Gallionella capsiferriformans ES-2]
          Length = 362

 Score =  225 bits (573), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 178/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +RL  +N         +++   + L RER  L+  +      Q    D     E+
Sbjct: 9   LGQLSERLLEVNQLLSTEEATRDMDTYRKLNRERAELEPVVDLFHAYQACEGDIAAAREM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           A + +            +     ++ + Q + L     D    +LEV AG GG E+  +A
Sbjct: 69  AEDPEMREFADTEIKEGEAKLALLDKELQTQLLPKDPNDERSVFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE+R+++ E +    GE  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRFAERRRWQVEVVSESPGEMGGYKEIIARIAGQGAYSVLKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ + P VD+  ++ ++ +D RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATETQGRVHTSACTVAIMPEVDEVNDVVLNNADLRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTGVVV+CQ  RSQH+NKAQA  +L A++ +   Q R + A    + K+ +G G    +
Sbjct: 249 IPTGVVVECQDGRSQHQNKAQAMRVLCARIKDA--QVRAQNAETAATRKSLVGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       ++DG++ +   A +A  +
Sbjct: 307 IRTYNY-PQGRVTDHRINLTLYKMDAIMDGEISELTGALMAEHQ 349


>gi|148378145|ref|YP_001252686.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC
           3502]
 gi|153932228|ref|YP_001382546.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC
           19397]
 gi|153936703|ref|YP_001386098.1| peptide chain release factor 1 [Clostridium botulinum A str. Hall]
 gi|166223548|sp|A7FQG2|RF1_CLOB1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223549|sp|A5HY35|RF1_CLOBH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|148287629|emb|CAL81694.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC
           3502]
 gi|152928272|gb|ABS33772.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC
           19397]
 gi|152932617|gb|ABS38116.1| peptide chain release factor 1 [Clostridium botulinum A str. Hall]
          Length = 358

 Score =  225 bits (573), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 125/347 (36%), Positives = 195/347 (56%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    +   L+ K  DP +  N  E + L +E   L+  ++  +E +    D     E+
Sbjct: 5   LNFIENKYEELSNKISDPSVMANQKEWQKLCKEHADLEIIVNTYREYKKAQEDLESDKEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  + +   + ++ + L++E  +       L     D  D ++E+ AGAGG E+ 
Sbjct: 65  LKEESDKELREMAQEEIKELTLKLEDLERELTILLLPKDPNDDKDVFIEIRAGAGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A+ LLRMYTR+AE++ +K E + ++  +  G K  T+ +KG  AY  LK E GVHR+ 
Sbjct: 125 LFASNLLRMYTRYAERKNWKVETISLNATDIGGFKEVTVAVKGKGAYSRLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P   D ++I I+ +D RID YRASG GGQ VNTTDSAVR
Sbjct: 185 RVPDTESSGRIHTSTATVAVLP-EVDDVDININANDLRIDVYRASGHGGQCVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ E+SQ KNK +A  +L+A+L+E      E  A+I E  K+++G G  
Sbjct: 244 ITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAE--AERAASIAEDRKSQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R  +        LDGD+D+ ++A +   +
Sbjct: 302 SERIRTYNY-PQGRITDHRIGLTLYKLETFLDGDIDEAIEALVTEDQ 347


>gi|330504612|ref|YP_004381481.1| peptide chain release factor 2 [Pseudomonas mendocina NK-01]
 gi|328918898|gb|AEB59729.1| peptide chain release factor 2 [Pseudomonas mendocina NK-01]
          Length = 304

 Score =  225 bits (573), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 169/302 (55%), Positives = 221/302 (73%), Gaps = 1/302 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L   +  I ++   L D+  LLE+A EE+D   + +    ++R++  +E  +F  + SGE
Sbjct: 2   LAQIVETIDDLTGSLADSRDLLEMAAEENDEGAVNDIVAEVERLREILEKLEFRRMFSGE 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D+N+ YL++ AG+GGTE+QDWAN+LLRMY RWA+KR F  E +E+ +GE AGIK AT+ 
Sbjct: 62  MDANNCYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFSAEIVELSEGEVAGIKGATVH 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ +D RID
Sbjct: 122 IKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPADLRID 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QK
Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R   +   E SK++IGWG QIRSYVL     +KDLRT +E++    VLDGDLD +++A+L
Sbjct: 242 RNAASQALEDSKSDIGWGHQIRSYVLDD-SRIKDLRTGVERSDCQKVLDGDLDGYLEASL 300

Query: 352 AI 353
             
Sbjct: 301 KQ 302


>gi|163943017|ref|YP_001647901.1| peptide chain release factor 1 [Bacillus weihenstephanensis KBAB4]
 gi|229470347|sp|A9VSC7|RF1_BACWK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|163865214|gb|ABY46273.1| peptide chain release factor 1 [Bacillus weihenstephanensis KBAB4]
          Length = 355

 Score =  225 bits (573), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 118/351 (33%), Positives = 182/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           + D       R   LN    DP +  +  + +   +E+  + + +   +E +D   +L D
Sbjct: 1   MLDRLQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQDTVEVYREYKDVREQLRD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127
              +LE  L+ D   +++E    L+  +  +  + +   +     D  +  +EV   AGG
Sbjct: 61  AKAMLEDKLDADMRDMVKEEVSELEGQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E G 
Sbjct: 121 DEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EI I E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EAEEVEINIHEKDVRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K  +G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 347


>gi|295105440|emb|CBL02984.1| bacterial peptide chain release factor 1 (bRF-1) [Faecalibacterium
           prausnitzii SL3/3]
          Length = 361

 Score =  225 bits (573), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 107/358 (29%), Positives = 180/358 (50%), Gaps = 15/358 (4%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  +    D     +R   L+ +   P    +    + LMRE    +  +   ++ Q  L
Sbjct: 1   MQDISSRMD--AVCRRFEELSMRLNQPDAAADPALFRKLMREYHDTEPVVEAYRDWQTAL 58

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES------LLSGEADSNDAYLE 120
                   L  E        +     +  +   +  + E+      L     D  +  +E
Sbjct: 59  DHLAQAKALLEEPGSLDPDFKQMIQQEISEKSQDVAKLENNLKILLLPKDVNDGKNVIME 118

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + +GAGG E+  +A+ LLRMYT +A+ R +  E L +++ E  G+K A + + G  AY  
Sbjct: 119 IRSGAGGEEAALFAHSLLRMYTMYAQNRGWTLELLNLNETELGGVKEAIISVDGAGAYNR 178

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E GVHR+ R+   ++  R HTS +++ V P   + ++  +   D RIDT+R+SGAGG
Sbjct: 179 LKYESGVHRVQRVPETETQGRIHTSTATVAVMPQ-AEEVDFALDMKDLRIDTFRSSGAGG 237

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QH+N T SA+R+THIPTG VV+CQ ERSQ +NK +A  +LR++L  L  +++E+   I  
Sbjct: 238 QHINKTSSAIRVTHIPTGTVVECQNERSQFQNKDKALEILRSRL--LAQKQKEQQDAINA 295

Query: 301 SSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             + ++G G    +IR+Y   P     D R  +   +   ++DG+LD+ + A    ++
Sbjct: 296 QRQGQVGTGDRSEKIRTYNF-PQDRCTDHRIGLTVHNLEKIMDGNLDEVIDALATREQ 352


>gi|157370232|ref|YP_001478221.1| peptide chain release factor 1 [Serratia proteamaculans 568]
 gi|166977369|sp|A8GDA3|RF1_SERP5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157321996|gb|ABV41093.1| peptide chain release factor 1 [Serratia proteamaculans 568]
          Length = 361

 Score =  225 bits (573), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 113/337 (33%), Positives = 174/337 (51%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +       + L RE   L +      E +    D      +
Sbjct: 9   LEALQERHEEVQALLGDAGVIAEQDRFRALSREYAQLTDVSRCFLEWRKVQDDLATAEMM 68

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   +  +E  D     +   +  Q   L     D  D +LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQEELKDAKAATEELEQQLQVLLLPKDPDDERDCFLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +  ++GE  G K     + G   +G LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAETRRWRVEIMSANEGEHGGYKEVIAKVSGDGVFGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P V ++   EI+  D +IDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVMPAVPEAELPEINAGDLKIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKRQQ--AEASTRRNLLGTGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQ 342


>gi|16080754|ref|NP_391582.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221311662|ref|ZP_03593509.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221315990|ref|ZP_03597795.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
           str. NCIB 3610]
 gi|221320901|ref|ZP_03602195.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
           str. JH642]
 gi|221325185|ref|ZP_03606479.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
           str. SMY]
 gi|321313251|ref|YP_004205538.1| peptide chain release factor 1 [Bacillus subtilis BSn5]
 gi|1172909|sp|P45872|RF1_BACSU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|853776|emb|CAA89884.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|2636226|emb|CAB15718.1| peptide chain release factor 1 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|291486285|dbj|BAI87360.1| peptide chain release factor 1 [Bacillus subtilis subsp. natto
           BEST195]
 gi|320019525|gb|ADV94511.1| peptide chain release factor 1 [Bacillus subtilis BSn5]
          Length = 356

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 107/351 (30%), Positives = 179/351 (50%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D   +  +R   LN    DP +  +  + +   +E+  +   +   ++ +D       
Sbjct: 1   MLDRLKSIEERYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVDVYRQYRDASEQLAD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +  E+ D  +     + +  ++ E     E  +   +     D  +  +E+   AGG
Sbjct: 61  AKAMLEEKLDAEMRDMVKEEISELQKETETLSERLKVLLIPKDPNDDKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE +E +     G K    +I G  AY  LK E G 
Sbjct: 121 EEAALFAGNLYRMYSRYAELQGWKTEVMEANVTGTGGYKEIIFMITGSGAYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P   + +E++I E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLP-EAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K+ +G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKF--QQEAQAEYDQTRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+G LD+ ++A +   +
Sbjct: 298 SGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQ 347


>gi|238792551|ref|ZP_04636184.1| Peptide chain release factor 1 [Yersinia intermedia ATCC 29909]
 gi|238728186|gb|EEQ19707.1| Peptide chain release factor 1 [Yersinia intermedia ATCC 29909]
          Length = 360

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 116/337 (34%), Positives = 174/337 (51%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     KE +    D      +
Sbjct: 9   LEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSVQDDLEAAEMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE       R +   +  Q   L     D  D +LE+ AG GG E+  +A
Sbjct: 69  LEDLEMREMAQEELKEAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             + RMY+R+AE R++K E +   +GE  G K     + G   +G LK E G HR+ R+ 
Sbjct: 129 GDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGDGVFGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR+         +  +G G    +
Sbjct: 249 IPTGLVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQ--LAEASERRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQ 342


>gi|107103215|ref|ZP_01367133.1| hypothetical protein PaerPA_01004284 [Pseudomonas aeruginosa PACS2]
 gi|254236611|ref|ZP_04929934.1| peptide chain release factor 2 [Pseudomonas aeruginosa C3719]
 gi|313109107|ref|ZP_07795079.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa
           39016]
 gi|126168542|gb|EAZ54053.1| peptide chain release factor 2 [Pseudomonas aeruginosa C3719]
 gi|310881581|gb|EFQ40175.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa
           39016]
          Length = 300

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 168/298 (56%), Positives = 223/298 (74%), Gaps = 1/298 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  + ++   L D+  LL++A+EEDD   + + ++ ++R++  +E  +F  + SGE D N
Sbjct: 2   VETLDDLTSGLADSRDLLDMAVEEDDEGAVDDVANEVERLREILEKLEFRRMFSGEMDPN 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +AYL++ AG+GGTE+QDWANMLLRMY RWA+K  F    +E+ +GE AGIK AT+ IKG 
Sbjct: 62  NAYLDIQAGSGGTEAQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIKGATVHIKGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+GWL+ E GVHRLVR SP+DS +RRHTSF++++V P +DD+IEIEI+ +D RIDTYR+
Sbjct: 122 YAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPADLRIDTYRS 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QKR   
Sbjct: 182 SGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRTAA 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +   E SK++IGWG QIRSYVL     +KDLRT IE++    VLDGDLD++++A+L  
Sbjct: 242 SQALEDSKSDIGWGHQIRSYVLD-QSRIKDLRTGIERSDCDKVLDGDLDEYLEASLKQ 298


>gi|160945367|ref|ZP_02092593.1| hypothetical protein FAEPRAM212_02889 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443098|gb|EDP20103.1| hypothetical protein FAEPRAM212_02889 [Faecalibacterium prausnitzii
           M21/2]
          Length = 361

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 107/358 (29%), Positives = 180/358 (50%), Gaps = 15/358 (4%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  +    D     +R   L+ +   P    +    + LMRE    +  +   ++ Q  L
Sbjct: 1   MQDISSRMD--AVCRRFEELSMRLNQPDAAADPALFRKLMREYHDTEPVVEAYRDWQTAL 58

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES------LLSGEADSNDAYLE 120
                   L  E        +     +  +   +  + E+      L     D  +  +E
Sbjct: 59  DHLAQAKALLEEPGSLDPDFKQMIQQEISEKSQDVAKLENNLKILLLPKDVNDGKNVIME 118

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + +GAGG E+  +A+ LLRMYT +A+ R +  E L +++ E  G+K A + + G  AY  
Sbjct: 119 IRSGAGGEEAALFAHSLLRMYTMYAQNRGWTLELLNLNETELGGVKEAIISVDGAGAYNR 178

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E GVHR+ R+   ++  R HTS +++ V P   + ++  +   D RIDT+R+SGAGG
Sbjct: 179 LKYESGVHRVQRVPETETQGRIHTSTATVAVMPQ-AEEVDFALDMKDLRIDTFRSSGAGG 237

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QH+N T SA+R+THIPTG VV+CQ ERSQ +NK +A  +LR++L  L  +++E+   I  
Sbjct: 238 QHINKTSSAIRVTHIPTGTVVECQNERSQFQNKDKALEILRSRL--LAQKQKEQQDAINA 295

Query: 301 SSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             + ++G G    +IR+Y   P     D R  +   +   ++DG+LD+ + A    ++
Sbjct: 296 QRQGQVGTGDRSEKIRTYNF-PQDRCTDHRIGLTVHNLEKIMDGNLDEVIDALATREQ 352


>gi|323187441|gb|EFZ72750.1| peptide chain release factor 1 [Escherichia coli RN587/1]
          Length = 360

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 114/344 (33%), Positives = 179/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+      ++ +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPRDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            R+Y   P   V D R N+      +V++G LD  ++  +   +
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 349


>gi|320109111|ref|YP_004184701.1| peptide chain release factor 1 [Terriglobus saanensis SP1PR4]
 gi|319927632|gb|ADV84707.1| peptide chain release factor 1 [Terriglobus saanensis SP1PR4]
          Length = 355

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 108/347 (31%), Positives = 176/347 (50%), Gaps = 9/347 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD       R   L ++   P + Q+    +  M+  + L+  I   +E ++ +     
Sbjct: 1   MFDRLQQMEVRYQELESELAQPEIVQDQPRYQKAMKAHRDLEILIEKFREFKEVMNGIAD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
              +  + D   + +E    L   K    E  +   L     DS +  LE+ AG GG E+
Sbjct: 61  AHTMLADPDMKEMAEEELSTLMPRKTEIEEELKIMLLPKDPNDSKNVVLEIRAGTGGDEA 120

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  + RMY R+AE+ ++K E L   +G   G+K  T + +G   Y  LK E GVHR+
Sbjct: 121 ALFAEEMFRMYLRFAEQHRWKVEVLSEREGAVGGMKEVTAIFEGDQVYSQLKYESGVHRV 180

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS  ++ V P   + ++++I   D RIDT+ +SG GGQ VNTT SA+
Sbjct: 181 QRVPATETQGRVHTSAITVAVLP-EAEEVDVKIEAKDLRIDTFCSSGPGGQSVNTTYSAI 239

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PT  VV CQ E+SQ KN+ +A  +LR++LYE+E+++  ++       K ++G G 
Sbjct: 240 RITHLPTNTVVSCQDEKSQIKNREKAMRVLRSRLYEVEMERVHQLQATA--RKAQVGSGD 297

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +IR+Y   P   + D R  +       V++G L   + A +A  
Sbjct: 298 RSEKIRTYNF-PQNRLTDHRIGLTLHQLEYVMEGKLQPVVDALIAED 343


>gi|50121117|ref|YP_050284.1| peptide chain release factor 1 [Pectobacterium atrosepticum
           SCRI1043]
 gi|61214611|sp|Q6D551|RF1_ERWCT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|49611643|emb|CAG75092.1| peptide chain release factor 1 [Pectobacterium atrosepticum
           SCRI1043]
          Length = 360

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 117/337 (34%), Positives = 177/337 (52%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     +P +  ++   + L RE   L +     ++ Q    D      +
Sbjct: 9   LEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQQWQQAQEDQQTAEMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE        I+   +  Q   L     D    +LEV AG GG E+  +A
Sbjct: 69  LDDPEMRDMAQEELKEGKAAIEALEQELQVLLLPKDPDDERGCFLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   DGE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESRRWRVEVMSASDGEHGGYKEVIAKISGDGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V   V ++   +I+ SD RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMAAVPEAELPDINPSDLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIRAAEIHKRQQE--EASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           IR+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDALIQ 342


>gi|15830970|ref|NP_309743.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           Sakai]
 gi|16129174|ref|NP_415729.1| peptide chain release factor RF-1 [Escherichia coli str. K-12
           substr. MG1655]
 gi|24112610|ref|NP_707120.1| peptide chain release factor 1 [Shigella flexneri 2a str. 301]
 gi|26247534|ref|NP_753574.1| peptide chain release factor 1 [Escherichia coli CFT073]
 gi|30062735|ref|NP_836906.1| peptide chain release factor 1 [Shigella flexneri 2a str. 2457T]
 gi|74312449|ref|YP_310868.1| peptide chain release factor 1 [Shigella sonnei Ss046]
 gi|82776551|ref|YP_402900.1| peptide chain release factor 1 [Shigella dysenteriae Sd197]
 gi|89108056|ref|AP_001836.1| peptide chain release factor RF-1 [Escherichia coli str. K-12
           substr. W3110]
 gi|91210432|ref|YP_540418.1| peptide chain release factor 1 [Escherichia coli UTI89]
 gi|110641441|ref|YP_669171.1| peptide chain release factor 1 [Escherichia coli 536]
 gi|110805216|ref|YP_688736.1| peptide chain release factor 1 [Shigella flexneri 5 str. 8401]
 gi|117623429|ref|YP_852342.1| peptide chain release factor 1 [Escherichia coli APEC O1]
 gi|157158410|ref|YP_001462464.1| peptide chain release factor 1 [Escherichia coli E24377A]
 gi|157160716|ref|YP_001458034.1| peptide chain release factor 1 [Escherichia coli HS]
 gi|168750771|ref|ZP_02775793.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4113]
 gi|168758136|ref|ZP_02783143.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4401]
 gi|168764382|ref|ZP_02789389.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4501]
 gi|168771100|ref|ZP_02796107.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4486]
 gi|168776896|ref|ZP_02801903.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4196]
 gi|168782567|ref|ZP_02807574.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4076]
 gi|168787715|ref|ZP_02812722.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC869]
 gi|168801524|ref|ZP_02826531.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC508]
 gi|170020422|ref|YP_001725376.1| peptide chain release factor 1 [Escherichia coli ATCC 8739]
 gi|170080839|ref|YP_001730159.1| peptide chain release factor RF-1 [Escherichia coli str. K-12
           substr. DH10B]
 gi|170682630|ref|YP_001743983.1| peptide chain release factor 1 [Escherichia coli SMS-3-5]
 gi|188494282|ref|ZP_03001552.1| peptide chain release factor 1 [Escherichia coli 53638]
 gi|191170894|ref|ZP_03032445.1| peptide chain release factor 1 [Escherichia coli F11]
 gi|193064852|ref|ZP_03045929.1| peptide chain release factor 1 [Escherichia coli E22]
 gi|193069953|ref|ZP_03050901.1| peptide chain release factor 1 [Escherichia coli E110019]
 gi|194426002|ref|ZP_03058558.1| peptide chain release factor 1 [Escherichia coli B171]
 gi|194434263|ref|ZP_03066529.1| peptide chain release factor 1 [Shigella dysenteriae 1012]
 gi|194437123|ref|ZP_03069222.1| peptide chain release factor 1 [Escherichia coli 101-1]
 gi|195939099|ref|ZP_03084481.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4024]
 gi|208807446|ref|ZP_03249783.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4206]
 gi|208816069|ref|ZP_03257248.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4045]
 gi|208822717|ref|ZP_03263036.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4042]
 gi|209398404|ref|YP_002270145.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4115]
 gi|209918452|ref|YP_002292536.1| peptide chain release factor 1 [Escherichia coli SE11]
 gi|217328218|ref|ZP_03444300.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           TW14588]
 gi|218549098|ref|YP_002382889.1| peptide chain release factor 1 [Escherichia fergusonii ATCC 35469]
 gi|218553765|ref|YP_002386678.1| peptide chain release factor 1 [Escherichia coli IAI1]
 gi|218558140|ref|YP_002391053.1| peptide chain release factor 1 [Escherichia coli S88]
 gi|218694725|ref|YP_002402392.1| peptide chain release factor 1 [Escherichia coli 55989]
 gi|218699918|ref|YP_002407547.1| peptide chain release factor 1 [Escherichia coli IAI39]
 gi|218704733|ref|YP_002412252.1| peptide chain release factor 1 [Escherichia coli UMN026]
 gi|227886367|ref|ZP_04004172.1| peptide chain release factor 1 [Escherichia coli 83972]
 gi|237705173|ref|ZP_04535654.1| peptide chain release factor RF-1 [Escherichia sp. 3_2_53FAA]
 gi|238900442|ref|YP_002926238.1| peptide chain release factor RF-1 [Escherichia coli BW2952]
 gi|253773790|ref|YP_003036621.1| peptide chain release factor 1 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254161293|ref|YP_003044401.1| peptide chain release factor 1 [Escherichia coli B str. REL606]
 gi|254792681|ref|YP_003077518.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           TW14359]
 gi|256018539|ref|ZP_05432404.1| peptide chain release factor 1 [Shigella sp. D9]
 gi|260843503|ref|YP_003221281.1| peptide chain release factor RF-1 [Escherichia coli O103:H2 str.
           12009]
 gi|260854872|ref|YP_003228763.1| peptide chain release factor RF-1 [Escherichia coli O26:H11 str.
           11368]
 gi|260867616|ref|YP_003234018.1| peptide chain release factor RF-1 [Escherichia coli O111:H- str.
           11128]
 gi|261224943|ref|ZP_05939224.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261257200|ref|ZP_05949733.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291282236|ref|YP_003499054.1| Peptide chain release factor 1 [Escherichia coli O55:H7 str.
           CB9615]
 gi|293404754|ref|ZP_06648746.1| peptide chain release factor 1 [Escherichia coli FVEC1412]
 gi|293409598|ref|ZP_06653174.1| peptide chain release factor 1 [Escherichia coli B354]
 gi|293414488|ref|ZP_06657137.1| peptide chain release factor 1 [Escherichia coli B185]
 gi|293433527|ref|ZP_06661955.1| peptide chain release factor 1 [Escherichia coli B088]
 gi|298380397|ref|ZP_06989996.1| peptide chain release factor 1 [Escherichia coli FVEC1302]
 gi|300816902|ref|ZP_07097122.1| peptide chain release factor 1 [Escherichia coli MS 107-1]
 gi|300821019|ref|ZP_07101168.1| peptide chain release factor 1 [Escherichia coli MS 119-7]
 gi|300896599|ref|ZP_07115118.1| peptide chain release factor 1 [Escherichia coli MS 198-1]
 gi|300906882|ref|ZP_07124556.1| peptide chain release factor 1 [Escherichia coli MS 84-1]
 gi|300921823|ref|ZP_07137980.1| peptide chain release factor 1 [Escherichia coli MS 182-1]
 gi|300928243|ref|ZP_07143780.1| peptide chain release factor 1 [Escherichia coli MS 187-1]
 gi|300939553|ref|ZP_07154210.1| peptide chain release factor 1 [Escherichia coli MS 21-1]
 gi|300951678|ref|ZP_07165502.1| peptide chain release factor 1 [Escherichia coli MS 116-1]
 gi|300955611|ref|ZP_07167968.1| peptide chain release factor 1 [Escherichia coli MS 175-1]
 gi|300971920|ref|ZP_07171708.1| peptide chain release factor 1 [Escherichia coli MS 45-1]
 gi|300995966|ref|ZP_07181328.1| peptide chain release factor 1 [Escherichia coli MS 200-1]
 gi|301017243|ref|ZP_07182024.1| peptide chain release factor 1 [Escherichia coli MS 69-1]
 gi|301046860|ref|ZP_07193977.1| peptide chain release factor 1 [Escherichia coli MS 185-1]
 gi|301305581|ref|ZP_07211672.1| peptide chain release factor 1 [Escherichia coli MS 124-1]
 gi|301327073|ref|ZP_07220355.1| peptide chain release factor 1 [Escherichia coli MS 78-1]
 gi|301648136|ref|ZP_07247889.1| peptide chain release factor 1 [Escherichia coli MS 146-1]
 gi|306813891|ref|ZP_07448064.1| peptide chain release factor 1 [Escherichia coli NC101]
 gi|307137826|ref|ZP_07497182.1| peptide chain release factor 1 [Escherichia coli H736]
 gi|307310034|ref|ZP_07589684.1| peptide chain release factor 1 [Escherichia coli W]
 gi|309789161|ref|ZP_07683754.1| peptide chain release factor 1 [Shigella dysenteriae 1617]
 gi|309794302|ref|ZP_07688726.1| peptide chain release factor 1 [Escherichia coli MS 145-7]
 gi|312971398|ref|ZP_07785573.1| peptide chain release factor 1 [Escherichia coli 1827-70]
 gi|331641741|ref|ZP_08342876.1| peptide chain release factor 1 [Escherichia coli H736]
 gi|331646529|ref|ZP_08347632.1| peptide chain release factor 1 [Escherichia coli M605]
 gi|331662614|ref|ZP_08363537.1| peptide chain release factor 1 [Escherichia coli TA143]
 gi|331667595|ref|ZP_08368459.1| peptide chain release factor 1 [Escherichia coli TA271]
 gi|331676991|ref|ZP_08377687.1| peptide chain release factor 1 [Escherichia coli H591]
 gi|331682700|ref|ZP_08383319.1| peptide chain release factor 1 [Escherichia coli H299]
 gi|332279599|ref|ZP_08392012.1| peptide chain release factor RF-1 [Shigella sp. D9]
 gi|67471891|sp|P0A7I0|RF1_ECOLI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|67471892|sp|P0A7I1|RF1_ECOL6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|67471893|sp|P0A7I2|RF1_ECO57 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|67471894|sp|P0A7I3|RF1_SHIFL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361536|sp|Q0TIF9|RF1_ECOL5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361537|sp|Q1RCM7|RF1_ECOUT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361608|sp|Q32GZ6|RF1_SHIDS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361609|sp|Q3Z0S9|RF1_SHISS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|122957490|sp|Q0T5I4|RF1_SHIF8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223555|sp|A1AAD8|RF1_ECOK1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166977361|sp|A7ZKY5|RF1_ECO24 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166977362|sp|A7ZZE7|RF1_ECOHS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039971|sp|B1IU82|RF1_ECOLC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739104|sp|B7MKB3|RF1_ECO45 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739105|sp|B7NUX7|RF1_ECO7I RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739106|sp|B7LXC6|RF1_ECO8A RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739107|sp|B7N422|RF1_ECOLU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739108|sp|B1LH89|RF1_ECOSM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739109|sp|B7LSH9|RF1_ESCF3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229576656|sp|B1XAQ2|RF1_ECODH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238058712|sp|B5YXM9|RF1_ECO5E RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238058713|sp|B6I9S6|RF1_ECOSE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790881|sp|B7LGX2|RF1_ECO55 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|259585238|sp|C4ZTQ2|RF1_ECOBW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|26107935|gb|AAN80134.1|AE016759_408 Peptide chain release factor 1 [Escherichia coli CFT073]
 gi|1651601|dbj|BAA36069.1| peptide chain release factor RF-1 [Escherichia coli str. K12
           substr. W3110]
 gi|1787462|gb|AAC74295.1| peptide chain release factor RF-1 [Escherichia coli str. K-12
           substr. MG1655]
 gi|13361181|dbj|BAB35139.1| peptide chain release factor RF-1 [Escherichia coli O157:H7 str.
           Sakai]
 gi|24051515|gb|AAN42827.1| peptide chain release factor RF-1 [Shigella flexneri 2a str. 301]
 gi|30040983|gb|AAP16713.1| peptide chain release factor RF-1 [Shigella flexneri 2a str. 2457T]
 gi|73855926|gb|AAZ88633.1| peptide chain release factor RF-1 [Shigella sonnei Ss046]
 gi|81240699|gb|ABB61409.1| peptide chain release factor RF-1 [Shigella dysenteriae Sd197]
 gi|91072006|gb|ABE06887.1| peptide chain release factor RF-1 [Escherichia coli UTI89]
 gi|110343033|gb|ABG69270.1| peptide chain release factor 1 [Escherichia coli 536]
 gi|110614764|gb|ABF03431.1| peptide chain release factor RF-1 [Shigella flexneri 5 str. 8401]
 gi|115512553|gb|ABJ00628.1| peptide chain release factor 1 [Escherichia coli APEC O1]
 gi|157066396|gb|ABV05651.1| peptide chain release factor 1 [Escherichia coli HS]
 gi|157080440|gb|ABV20148.1| peptide chain release factor 1 [Escherichia coli E24377A]
 gi|169755350|gb|ACA78049.1| peptide chain release factor 1 [Escherichia coli ATCC 8739]
 gi|169888674|gb|ACB02381.1| peptide chain release factor RF-1 [Escherichia coli str. K-12
           substr. DH10B]
 gi|170520348|gb|ACB18526.1| peptide chain release factor 1 [Escherichia coli SMS-3-5]
 gi|187767792|gb|EDU31636.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4196]
 gi|188015105|gb|EDU53227.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4113]
 gi|188489481|gb|EDU64584.1| peptide chain release factor 1 [Escherichia coli 53638]
 gi|188999995|gb|EDU68981.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4076]
 gi|189354981|gb|EDU73400.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4401]
 gi|189360046|gb|EDU78465.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4486]
 gi|189365613|gb|EDU84029.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4501]
 gi|189372547|gb|EDU90963.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC869]
 gi|189376326|gb|EDU94742.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC508]
 gi|190908626|gb|EDV68214.1| peptide chain release factor 1 [Escherichia coli F11]
 gi|192927537|gb|EDV82154.1| peptide chain release factor 1 [Escherichia coli E22]
 gi|192956706|gb|EDV87161.1| peptide chain release factor 1 [Escherichia coli E110019]
 gi|194416057|gb|EDX32323.1| peptide chain release factor 1 [Escherichia coli B171]
 gi|194417494|gb|EDX33597.1| peptide chain release factor 1 [Shigella dysenteriae 1012]
 gi|194424106|gb|EDX40094.1| peptide chain release factor 1 [Escherichia coli 101-1]
 gi|208727247|gb|EDZ76848.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4206]
 gi|208732717|gb|EDZ81405.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4045]
 gi|208738202|gb|EDZ85885.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4042]
 gi|209159804|gb|ACI37237.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC4115]
 gi|209772528|gb|ACI84576.1| peptide chain release factor RF-1 [Escherichia coli]
 gi|209772530|gb|ACI84577.1| peptide chain release factor RF-1 [Escherichia coli]
 gi|209772532|gb|ACI84578.1| peptide chain release factor RF-1 [Escherichia coli]
 gi|209772534|gb|ACI84579.1| peptide chain release factor RF-1 [Escherichia coli]
 gi|209772536|gb|ACI84580.1| peptide chain release factor RF-1 [Escherichia coli]
 gi|209911711|dbj|BAG76785.1| peptide chain release factor 1 [Escherichia coli SE11]
 gi|217318645|gb|EEC27071.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           TW14588]
 gi|218351457|emb|CAU97165.1| peptide chain release factor RF-1 [Escherichia coli 55989]
 gi|218356639|emb|CAQ89265.1| peptide chain release factor RF-1 [Escherichia fergusonii ATCC
           35469]
 gi|218360533|emb|CAQ98091.1| peptide chain release factor RF-1 [Escherichia coli IAI1]
 gi|218364909|emb|CAR02605.1| peptide chain release factor RF-1 [Escherichia coli S88]
 gi|218369904|emb|CAR17679.1| peptide chain release factor RF-1 [Escherichia coli IAI39]
 gi|218431830|emb|CAR12715.1| peptide chain release factor RF-1 [Escherichia coli UMN026]
 gi|222033010|emb|CAP75750.1| Peptide chain release factor 1 [Escherichia coli LF82]
 gi|226899930|gb|EEH86189.1| peptide chain release factor RF-1 [Escherichia sp. 3_2_53FAA]
 gi|227836571|gb|EEJ47037.1| peptide chain release factor 1 [Escherichia coli 83972]
 gi|238861984|gb|ACR63982.1| peptide chain release factor RF-1 [Escherichia coli BW2952]
 gi|242376990|emb|CAQ31713.1| peptide chain release factor RF1 [Escherichia coli BL21(DE3)]
 gi|253324834|gb|ACT29436.1| peptide chain release factor 1 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973194|gb|ACT38865.1| peptide chain release factor 1 [Escherichia coli B str. REL606]
 gi|253977408|gb|ACT43078.1| peptide chain release factor 1 [Escherichia coli BL21(DE3)]
 gi|254592081|gb|ACT71442.1| peptide chain release factor RF-1 [Escherichia coli O157:H7 str.
           TW14359]
 gi|257753521|dbj|BAI25023.1| peptide chain release factor RF-1 [Escherichia coli O26:H11 str.
           11368]
 gi|257758650|dbj|BAI30147.1| peptide chain release factor RF-1 [Escherichia coli O103:H2 str.
           12009]
 gi|257763972|dbj|BAI35467.1| peptide chain release factor RF-1 [Escherichia coli O111:H- str.
           11128]
 gi|260449654|gb|ACX40076.1| peptide chain release factor 1 [Escherichia coli DH1]
 gi|281178397|dbj|BAI54727.1| peptide chain release factor 1 [Escherichia coli SE15]
 gi|281600635|gb|ADA73619.1| Peptide chain release factor 1 [Shigella flexneri 2002017]
 gi|284921023|emb|CBG34088.1| peptide chain release factor 1 [Escherichia coli 042]
 gi|290762109|gb|ADD56070.1| Peptide chain release factor 1 [Escherichia coli O55:H7 str.
           CB9615]
 gi|291324346|gb|EFE63768.1| peptide chain release factor 1 [Escherichia coli B088]
 gi|291426962|gb|EFE99988.1| peptide chain release factor 1 [Escherichia coli FVEC1412]
 gi|291434546|gb|EFF07519.1| peptide chain release factor 1 [Escherichia coli B185]
 gi|291470066|gb|EFF12550.1| peptide chain release factor 1 [Escherichia coli B354]
 gi|294493866|gb|ADE92622.1| peptide chain release factor 1 [Escherichia coli IHE3034]
 gi|298277839|gb|EFI19353.1| peptide chain release factor 1 [Escherichia coli FVEC1302]
 gi|300301228|gb|EFJ57613.1| peptide chain release factor 1 [Escherichia coli MS 185-1]
 gi|300304663|gb|EFJ59183.1| peptide chain release factor 1 [Escherichia coli MS 200-1]
 gi|300317504|gb|EFJ67288.1| peptide chain release factor 1 [Escherichia coli MS 175-1]
 gi|300359542|gb|EFJ75412.1| peptide chain release factor 1 [Escherichia coli MS 198-1]
 gi|300400374|gb|EFJ83912.1| peptide chain release factor 1 [Escherichia coli MS 69-1]
 gi|300401315|gb|EFJ84853.1| peptide chain release factor 1 [Escherichia coli MS 84-1]
 gi|300411045|gb|EFJ94583.1| peptide chain release factor 1 [Escherichia coli MS 45-1]
 gi|300421749|gb|EFK05060.1| peptide chain release factor 1 [Escherichia coli MS 182-1]
 gi|300449124|gb|EFK12744.1| peptide chain release factor 1 [Escherichia coli MS 116-1]
 gi|300455557|gb|EFK19050.1| peptide chain release factor 1 [Escherichia coli MS 21-1]
 gi|300463712|gb|EFK27205.1| peptide chain release factor 1 [Escherichia coli MS 187-1]
 gi|300526318|gb|EFK47387.1| peptide chain release factor 1 [Escherichia coli MS 119-7]
 gi|300530676|gb|EFK51738.1| peptide chain release factor 1 [Escherichia coli MS 107-1]
 gi|300839170|gb|EFK66930.1| peptide chain release factor 1 [Escherichia coli MS 124-1]
 gi|300846326|gb|EFK74086.1| peptide chain release factor 1 [Escherichia coli MS 78-1]
 gi|301073722|gb|EFK88528.1| peptide chain release factor 1 [Escherichia coli MS 146-1]
 gi|305852528|gb|EFM52976.1| peptide chain release factor 1 [Escherichia coli NC101]
 gi|306909752|gb|EFN40246.1| peptide chain release factor 1 [Escherichia coli W]
 gi|307553266|gb|ADN46041.1| peptide chain release factor 1 [Escherichia coli ABU 83972]
 gi|307627266|gb|ADN71570.1| peptide chain release factor 1 [Escherichia coli UM146]
 gi|308122207|gb|EFO59469.1| peptide chain release factor 1 [Escherichia coli MS 145-7]
 gi|308922915|gb|EFP68429.1| peptide chain release factor 1 [Shigella dysenteriae 1617]
 gi|309701510|emb|CBJ00817.1| peptide chain release factor 1 [Escherichia coli ETEC H10407]
 gi|310335995|gb|EFQ01195.1| peptide chain release factor 1 [Escherichia coli 1827-70]
 gi|312945841|gb|ADR26668.1| peptide chain release factor 1 [Escherichia coli O83:H1 str. NRG
           857C]
 gi|313649400|gb|EFS13831.1| peptide chain release factor 1 [Shigella flexneri 2a str. 2457T]
 gi|315060462|gb|ADT74789.1| peptide chain release factor RF-1 [Escherichia coli W]
 gi|315135847|dbj|BAJ43006.1| peptide chain release factor 1 [Escherichia coli DH1]
 gi|315288568|gb|EFU47966.1| peptide chain release factor 1 [Escherichia coli MS 110-3]
 gi|315290789|gb|EFU50161.1| peptide chain release factor 1 [Escherichia coli MS 153-1]
 gi|315297345|gb|EFU56625.1| peptide chain release factor 1 [Escherichia coli MS 16-3]
 gi|315615947|gb|EFU96573.1| peptide chain release factor 1 [Escherichia coli 3431]
 gi|320181782|gb|EFW56692.1| Peptide chain release factor 1 [Shigella boydii ATCC 9905]
 gi|320188003|gb|EFW62670.1| Peptide chain release factor 1 [Escherichia coli O157:H7 str.
           EC1212]
 gi|320195779|gb|EFW70404.1| Peptide chain release factor 1 [Escherichia coli WV_060327]
 gi|320199250|gb|EFW73841.1| Peptide chain release factor 1 [Escherichia coli EC4100B]
 gi|320637363|gb|EFX07170.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           G5101]
 gi|320643225|gb|EFX12426.1| peptide chain release factor 1 [Escherichia coli O157:H- str.
           493-89]
 gi|320648162|gb|EFX16838.1| peptide chain release factor 1 [Escherichia coli O157:H- str. H
           2687]
 gi|320653996|gb|EFX22070.1| peptide chain release factor 1 [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320659475|gb|EFX27044.1| peptide chain release factor 1 [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320664612|gb|EFX31763.1| peptide chain release factor 1 [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323153190|gb|EFZ39452.1| peptide chain release factor 1 [Escherichia coli EPECa14]
 gi|323162264|gb|EFZ48122.1| peptide chain release factor 1 [Escherichia coli E128010]
 gi|323168381|gb|EFZ54062.1| peptide chain release factor 1 [Shigella sonnei 53G]
 gi|323179274|gb|EFZ64844.1| peptide chain release factor 1 [Escherichia coli 1180]
 gi|323185627|gb|EFZ70988.1| peptide chain release factor 1 [Escherichia coli 1357]
 gi|323378974|gb|ADX51242.1| peptide chain release factor 1 [Escherichia coli KO11]
 gi|323937932|gb|EGB34196.1| peptide chain release 1 [Escherichia coli E1520]
 gi|323942490|gb|EGB38658.1| peptide chain release [Escherichia coli E482]
 gi|323947506|gb|EGB43510.1| peptide chain release 1 [Escherichia coli H120]
 gi|323949672|gb|EGB45558.1| peptide chain release [Escherichia coli H252]
 gi|323953934|gb|EGB49733.1| peptide chain release [Escherichia coli H263]
 gi|323962789|gb|EGB58367.1| peptide chain release [Escherichia coli H489]
 gi|323973391|gb|EGB68578.1| peptide chain release [Escherichia coli TA007]
 gi|323977218|gb|EGB72305.1| peptide chain release [Escherichia coli TW10509]
 gi|324006000|gb|EGB75219.1| peptide chain release factor 1 [Escherichia coli MS 57-2]
 gi|324015639|gb|EGB84858.1| peptide chain release factor 1 [Escherichia coli MS 60-1]
 gi|324017539|gb|EGB86758.1| peptide chain release factor 1 [Escherichia coli MS 117-3]
 gi|324117241|gb|EGC11148.1| peptide chain release [Escherichia coli E1167]
 gi|325497513|gb|EGC95372.1| peptide chain release factor 1 [Escherichia fergusonii ECD227]
 gi|326342759|gb|EGD66529.1| Peptide chain release factor 1 [Escherichia coli O157:H7 str. 1044]
 gi|326346388|gb|EGD70125.1| Peptide chain release factor 1 [Escherichia coli O157:H7 str. 1125]
 gi|330911076|gb|EGH39586.1| peptide chain release factor 1 [Escherichia coli AA86]
 gi|331038539|gb|EGI10759.1| peptide chain release factor 1 [Escherichia coli H736]
 gi|331045281|gb|EGI17408.1| peptide chain release factor 1 [Escherichia coli M605]
 gi|331061036|gb|EGI33000.1| peptide chain release factor 1 [Escherichia coli TA143]
 gi|331065180|gb|EGI37075.1| peptide chain release factor 1 [Escherichia coli TA271]
 gi|331075680|gb|EGI46978.1| peptide chain release factor 1 [Escherichia coli H591]
 gi|331080331|gb|EGI51510.1| peptide chain release factor 1 [Escherichia coli H299]
 gi|332092251|gb|EGI97328.1| peptide chain release factor 1 [Shigella boydii 5216-82]
 gi|332098194|gb|EGJ03167.1| peptide chain release factor 1 [Shigella dysenteriae 155-74]
 gi|332101951|gb|EGJ05297.1| peptide chain release factor RF-1 [Shigella sp. D9]
 gi|332757864|gb|EGJ88191.1| peptide chain release factor 1 [Shigella flexneri 4343-70]
 gi|332759429|gb|EGJ89737.1| peptide chain release factor 1 [Shigella flexneri 2747-71]
 gi|332760305|gb|EGJ90595.1| peptide chain release factor 1 [Shigella flexneri K-671]
 gi|332767445|gb|EGJ97639.1| peptide chain release factor 1 [Shigella flexneri 2930-71]
 gi|333005050|gb|EGK24570.1| peptide chain release factor 1 [Shigella flexneri VA-6]
 gi|333005356|gb|EGK24874.1| peptide chain release factor 1 [Shigella flexneri K-218]
 gi|333007544|gb|EGK27022.1| peptide chain release factor 1 [Shigella flexneri K-272]
 gi|333019207|gb|EGK38494.1| peptide chain release factor 1 [Shigella flexneri K-304]
 gi|333019924|gb|EGK39196.1| peptide chain release factor 1 [Shigella flexneri K-227]
          Length = 360

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 114/344 (33%), Positives = 179/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+      ++ +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            R+Y   P   V D R N+      +V++G LD  ++  +   +
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 349


>gi|188996904|ref|YP_001931155.1| peptide chain release factor 1 [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931971|gb|ACD66601.1| peptide chain release factor 1 [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 360

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 122/346 (35%), Positives = 188/346 (54%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +++  L     DP + ++  + + + +E + L   ++   E +        + +L
Sbjct: 9   LESIEEKVKKLEELMADPEVLKDQSKIQSIAKEHKELSEILNLYNEYKKVSRQIEEVKQL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
                D  + +   + L+ +K + E  + +           D  +  LE+  GAGG E+ 
Sbjct: 69  LNSTPDDDLRELAEEELESLKKQQEDLEKKIEIALLPKDPNDEKNVILEIRQGAGGDEAS 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE+  +KTE L +H  E+ GIK    LIKG  AY  LK E GVHR+ 
Sbjct: 129 LFAAELFRMYQRYAERHGWKTEILSLHPTEKGGIKEVIALIKGKGAYSRLKYESGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS  ++ V P   + ++IEI   + +I+T RA GAGGQHVNTTDSAVR
Sbjct: 189 RVPETESSGRIHTSTVTVAVLP-EAEEVDIEIKPEELKIETMRAGGAGGQHVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPTG+VV CQ ERSQ +NK +A  +LRA+L +    +R E   I +  K ++G G +
Sbjct: 248 ITHIPTGMVVTCQDERSQLQNKMKAMQILRARLKDYY--ERLEKEKIAKERKEQVGTGER 305

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              IR+Y   P   V D R N      +D++DGDLD+ +   +A +
Sbjct: 306 SEKIRTYNF-PQNRVTDHRVNYTSYRINDIMDGDLDEIIDVLIAKE 350


>gi|147567|gb|AAA24519.1| peptide chain release factor 1 [Escherichia coli]
          Length = 360

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 178/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+      ++ +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTT SA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTGSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            R+Y   P   V D R N+      +V++G LD  ++  +   +
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 349


>gi|331701218|ref|YP_004398177.1| peptide chain release factor 1 [Lactobacillus buchneri NRRL
           B-30929]
 gi|329128561|gb|AEB73114.1| Peptide chain release factor 1 [Lactobacillus buchneri NRRL
           B-30929]
          Length = 360

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 110/351 (31%), Positives = 187/351 (53%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           +FD   + V R   LN    DP +  +  +   L +E   L + ++  K+ Q    +L D
Sbjct: 4   IFDKLQSVVDRYDELNELISDPEVIADTQKFMKLSKEEADLRDTVAAFKKYQKVSKQLDD 63

Query: 69  NLILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           +  +L   +++D  +++++   +L   K    +  +   L     D  +  +E+H  AGG
Sbjct: 64  DKEMLREKIDDDLEAMVKDEITSLTDEKDKLEDQMKVMLLPKDPNDDKNIIMEIHGAAGG 123

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E   +A  L  MY+++AE++ +K E ++ ++ E  G K   L+I G   Y  LK E G 
Sbjct: 124 DEGSLFAADLFSMYSKYAERQGWKVEIIDKNETEVGGFKEIVLMITGDKVYSKLKYENGA 183

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P  ++ ++I+I   D R+D YR+SGAGGQH+N T 
Sbjct: 184 HRVQRVPVTESAGRVHTSTATVGVMP-EEEDVDIDIDPKDIRVDVYRSSGAGGQHINKTS 242

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+VV  Q ERSQ +N+ +A  +L+A++Y+   Q+  E        K+ IG
Sbjct: 243 SAVRMTHLPTGIVVAMQDERSQQQNRQKAMKILKARVYDYYAQQ--EQDQYNAERKSAIG 300

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G+LD+ + A +   +
Sbjct: 301 TGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIVSDQ 350


>gi|323490903|ref|ZP_08096098.1| peptide chain release factor 1 [Planococcus donghaensis MPA1U2]
 gi|323395383|gb|EGA88234.1| peptide chain release factor 1 [Planococcus donghaensis MPA1U2]
          Length = 359

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 107/351 (30%), Positives = 174/351 (49%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   +   R   LN    DP +  +  + +   +E+  L   +   +E +D       
Sbjct: 1   MFDRLQSVEDRYDRLNELLSDPDIVSDTNKLRDYSKEQSDLQETVETYREYKDLTTQLTE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
              +  E+ D  + +   + +  ++ +V   +       +     D  +  +E+   AGG
Sbjct: 61  AKAMFDEKMDADMREMVKEEVNELEQQVSVVEERLHKLLIPKDPNDDKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE   +K + ++ +     G K    +I G  AY  +K E G 
Sbjct: 121 DEAALFAGDLYRMYTRFAESNGWKIQVMDSNPTGLGGFKEIVFMITGKGAYSKMKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P   + +E++I E+D R DTY +SGAGGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLP-EVEEVEVDIHENDIRTDTYASSGAGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PT  VV CQ E+SQ KNKA A  +LRA++Y  E  ++E  A      K+ +G
Sbjct: 240 SAVRLTHLPTNTVVTCQDEKSQIKNKASAMKVLRARVY--EKFQQEAQAEYDAVRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L G +D+ + A +  ++
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKMDEIVDALIVEEQ 347


>gi|257467857|ref|ZP_05631953.1| peptide chain release factor 1 [Fusobacterium ulcerans ATCC 49185]
 gi|317062146|ref|ZP_07926631.1| bacterial peptide chain release factor 1 [Fusobacterium ulcerans
           ATCC 49185]
 gi|313687822|gb|EFS24657.1| bacterial peptide chain release factor 1 [Fusobacterium ulcerans
           ATCC 49185]
          Length = 358

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 118/347 (34%), Positives = 182/347 (52%), Gaps = 10/347 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   LN     P +  +  +     +    +   +   KE +  + D   + E 
Sbjct: 5   LEEVVKRFDELNELLGSPEVLADPKKMMECNKSLSEITPIVEKYKEYKRVVEDFDFIKEN 64

Query: 76  ALEEDDCSILQETSDNLQRIKL----EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L+ ++       +  +   L   E D  +  +E+  GAGG E+ 
Sbjct: 65  LKTEKDQDMREMMHEELKELEESIPELEKELKVLLLPKDENDDKNVIIEIRGGAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE++K+K E +E  +    GIK A   I G  AY  LK E GVHR+ 
Sbjct: 125 LFAGNLFRMYSRYAERKKWKMEIIEKQEMGIGGIKEAVFSINGFGAYSRLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P V+D  E++I   D +IDTYR+ GAGGQHVN TDSAVR
Sbjct: 185 RVPETESAGRVHTSTATVAVLPEVEDVKEVKIDPRDLKIDTYRSGGAGGQHVNMTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG++VQCQ ERSQ KN+ +A   L +KL+E+E +K+   + +    + ++G G  
Sbjct: 245 ITHLPTGIIVQCQDERSQLKNREKAMKHLASKLFEMECEKQR--SQVESERRLQVGTGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R           LDGDLD+ + A +   +
Sbjct: 303 SEKIRTYNY-PQGRITDHRIKFTVYQLEAYLDGDLDEMIDALITFSQ 348


>gi|184153097|ref|YP_001841438.1| peptide chain release factor 1 [Lactobacillus reuteri JCM 1112]
 gi|238058717|sp|B2G676|RF1_LACRJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|183224441|dbj|BAG24958.1| peptide chain release factor 1 [Lactobacillus reuteri JCM 1112]
          Length = 360

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 107/354 (30%), Positives = 182/354 (51%), Gaps = 12/354 (3%)

Query: 10  LGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DR 65
           +  +FD       R   LN    DP +  +      L +E   L   +    + +     
Sbjct: 1   MEEIFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNQYKKVTQT 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAG 124
           + D+  LL    ++D  ++ +E     +  + ++E + +   +     D  +  +E+   
Sbjct: 61  ISDDEELLRETNDDDLTALTKEELAEAREEQAQLEKELEVLLIPKDPNDDKNIIMEIRGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L  MY R+AEK+ +K E ++ ++ E  G K   L+I G   Y  LK E
Sbjct: 121 AGGDEASLFAADLYNMYLRYAEKQGWKVEVVDRNETEVGGFKEIALMITGDKVYSKLKFE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS +++ V P   + ++++I   D R+D YR+SGAGGQHVN
Sbjct: 181 NGAHRVQRVPVTESAGRVHTSTATVGVMP-EAEDVDVDIDPKDIRVDVYRSSGAGGQHVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L++++Y+    +++E +   +  K 
Sbjct: 240 KTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYY--QQQEQSAYDQKRKD 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            IG G    +IR+Y   P   V D R  +       ++ GDLD+ ++A +   +
Sbjct: 298 AIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGDLDEIIEALIVADQ 350


>gi|78221601|ref|YP_383348.1| peptide chain release factor 1 [Geobacter metallireducens GS-15]
 gi|119361544|sp|Q39YQ1|RF1_GEOMG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78192856|gb|ABB30623.1| bacterial peptide chain release factor 1 (bRF-1) [Geobacter
           metallireducens GS-15]
          Length = 355

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 112/348 (32%), Positives = 179/348 (51%), Gaps = 9/348 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +    R   L +    P +  N  E + L RE   L   +   +  +  L +   
Sbjct: 1   MFDKIEELEIRYQELESLLAVPTVIANQPEFRKLSREHNDLTGLVEAYRRYKKVLAEIEG 60

Query: 72  LLELALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             EL  + +   +   E  D  ++ +      +   L     D  +  LE+ AG GG ES
Sbjct: 61  NRELLADPEMKEMAEAELEDLERQQEELEGEIKLLLLPKDPNDDRNVILEIRAGTGGDES 120

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY+R+AE+ ++K E +   + E  G K    LI+G   +  LK E G HR+
Sbjct: 121 ALFAGDLFRMYSRFAERNRWKVEVMSASESERGGFKEVVALIEGQAVFAKLKYESGTHRV 180

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS  ++ V P   + IEI+I+  D +ID YRASGAGGQHVN T+SAV
Sbjct: 181 QRVPETEAQGRIHTSACTVAVLP-EAEDIEIDINPVDLKIDVYRASGAGGQHVNKTESAV 239

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VV+CQ ERSQ KN+++A  +L++++ +   Q++   A I    K ++G G 
Sbjct: 240 RITHLPTGIVVECQDERSQIKNRSKAMKVLKSRILDGLQQEQN--ARIAADRKQQVGSGD 297

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   + D R  +       +++GD+ + + +  A  +
Sbjct: 298 RSERIRTYNF-PQGRMTDHRIGLTLYRLDALMEGDIAEVVDSLRAHYQ 344


>gi|289450407|ref|YP_003475653.1| peptide chain release factor 1 [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289184954|gb|ADC91379.1| peptide chain release factor 1 [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 366

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 119/347 (34%), Positives = 186/347 (53%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  + R   L+    DP L  +      +++E+  L   +  I++   +  +    L +
Sbjct: 6   LEAVLNRYEELSAGLSDPSLLADRDRYLRVVKEQAGLTEIVGVIRDYIAKKDELAENLAM 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E DD  +     + ++ +K+++   +       L     D  + YLE+  GAGG E+ 
Sbjct: 66  LQETDDEEMRLLLKEEIRDLKVKLPELEEKLQILLLPKDPRDEKNVYLEIRGGAGGEEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A +L RMY  +AE + FK E +E +  E  G+K     I+G  AY   K E GVHR+ 
Sbjct: 126 LFAEVLFRMYQSYAESKHFKVEIVEWNATELGGLKEVVCSIQGSGAYSLFKYESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P   D +++EI   D  IDTYR+SGAGGQHVN TDSA+R
Sbjct: 186 RVPVTESGGRIHTSTVTVAVLP-EVDEVDVEILPGDITIDTYRSSGAGGQHVNKTDSAIR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV CQ +RSQ+KNK +A  +LRAKLYE   ++R    +I E+ + ++G G  
Sbjct: 245 ITHIPTGIVVTCQDQRSQYKNKDRAMAVLRAKLYERAQEER--AGSIAEARRDQVGTGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +      ++L G+LD  ++  +  ++
Sbjct: 303 SERIRTYNY-PQGRVTDHRIGLTVYKIDEILAGNLDLIIEPLMRAER 348


>gi|291612728|ref|YP_003522885.1| peptide chain release factor 1 [Sideroxydans lithotrophicus ES-1]
 gi|291582840|gb|ADE10498.1| peptide chain release factor 1 [Sideroxydans lithotrophicus ES-1]
          Length = 360

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 114/344 (33%), Positives = 176/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +RL  +          +++   + L RER  ++  +      Q    D     E+
Sbjct: 9   LAQLSERLDEVTRLLSSEEATRDMDAFRRLNRERAEIEPVVDLYHAWQACEADIATAQEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           A + D     +      +    +     Q + L     D  + +LEV AG GG E+  +A
Sbjct: 69  AGDPDMREFAEAEIKAGRERLEQLEVDLQKQLLPKDPNDERNVFLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             + RMY R+AE+R+++ E +    GE  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDIFRMYVRFAERRRWQVEIISESPGEMGGYKEVIARIIGQGAYSVLKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ + P  D+  E+E++ ++ RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 ATETQGRIHTSACTVAILPEADEVGEVELNPAELRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG VV+CQ  RSQH+NKAQA  +L A++ +   Q++E  + I    K+ +G G    +
Sbjct: 249 LPTGTVVECQDGRSQHQNKAQAMRVLAARIKDK--QEQEAHSKIAAERKSLVGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       ++DGD+ +   A +A  +
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKMDQIMDGDISELTNALMAEHQ 349


>gi|148543687|ref|YP_001271057.1| peptide chain release factor 1 [Lactobacillus reuteri DSM 20016]
 gi|227363334|ref|ZP_03847463.1| peptide chain release factor 1 [Lactobacillus reuteri MM2-3]
 gi|227544508|ref|ZP_03974557.1| peptide chain release factor 1 [Lactobacillus reuteri CF48-3A]
 gi|300909304|ref|ZP_07126765.1| peptide chain release factor RF1 [Lactobacillus reuteri SD2112]
 gi|325682058|ref|ZP_08161576.1| peptide chain release factor RF1 [Lactobacillus reuteri MM4-1A]
 gi|148530721|gb|ABQ82720.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
           reuteri DSM 20016]
 gi|227071641|gb|EEI09935.1| peptide chain release factor 1 [Lactobacillus reuteri MM2-3]
 gi|227185531|gb|EEI65602.1| peptide chain release factor 1 [Lactobacillus reuteri CF48-3A]
 gi|300893169|gb|EFK86528.1| peptide chain release factor RF1 [Lactobacillus reuteri SD2112]
 gi|324978702|gb|EGC15651.1| peptide chain release factor RF1 [Lactobacillus reuteri MM4-1A]
          Length = 362

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 107/355 (30%), Positives = 182/355 (51%), Gaps = 12/355 (3%)

Query: 9   CLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---D 64
            +  +FD       R   LN    DP +  +      L +E   L   +    + +    
Sbjct: 2   EMEEIFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNQYKKVTQ 61

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHA 123
            + D+  LL    ++D  ++ +E     +  + ++E + +   +     D  +  +E+  
Sbjct: 62  TISDDEELLRETNDDDLTALTKEELAEAREEQAQLEKELEVLLIPKDPNDDKNIIMEIRG 121

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
            AGG E+  +A  L  MY R+AEK+ +K E ++ ++ E  G K   L+I G   Y  LK 
Sbjct: 122 AAGGDEASLFAADLYNMYLRYAEKQGWKVEVVDRNETEVGGFKEIALMITGDKVYSKLKF 181

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ R+   +S  R HTS +++ V P   + ++++I   D R+D YR+SGAGGQHV
Sbjct: 182 ENGAHRVQRVPVTESAGRVHTSTATVGVMP-EAEDVDVDIDPKDIRVDVYRSSGAGGQHV 240

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L++++Y+    +++E +   +  K
Sbjct: 241 NKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYY--QQQEQSAYDQKRK 298

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             IG G    +IR+Y   P   V D R  +       ++ GDLD+ ++A +   +
Sbjct: 299 DAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGDLDEIIEALIVADQ 352


>gi|87122989|ref|ZP_01078849.1| peptide chain release factor 1 [Marinomonas sp. MED121]
 gi|86161726|gb|EAQ63031.1| peptide chain release factor 1 [Marinomonas sp. MED121]
          Length = 363

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 117/348 (33%), Positives = 180/348 (51%), Gaps = 9/348 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
              +N   R   L     D  +  N    +   +E   L+  +   +E Q+   +     
Sbjct: 7   LKLENLADRYEELAALLSDAEIIMNQDLFRAYSKEYAELEPVVKCFEEFQENDENLEEAQ 66

Query: 74  ELALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            +  + D         +      R +  +   Q   L     D  + ++EV AG GG E+
Sbjct: 67  LMMTDSDPDIKEMGVEEMKASQIRKEELLLDLQKLLLPKDPNDGRNVFVEVRAGTGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY+R+AE +++K E +  ++GE  G K     I G  AY  LK E GVHR+
Sbjct: 127 SIFAGDLFRMYSRYAETQRWKVELISCNEGEHGGYKEVIARIVGEGAYSLLKFESGVHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ + P +D+   IEI+++D R+DT+RASGAGGQHVN TDSA+
Sbjct: 187 QRVPATESQGRIHTSACTVAIMPEMDEQDAIEINKADLRVDTFRASGAGGQHVNKTDSAI 246

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+THIPTGVVV+CQ ERSQHKN+A+A  +L ++L   E    +  A   E+ K+ +G G 
Sbjct: 247 RLTHIPTGVVVECQDERSQHKNRAKAMALLASRLQAAEE--EKHAAEQSETRKSLVGSGD 304

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+      +++ GDLD+ ++  +   +
Sbjct: 305 RSERIRTYNY-PQGRVTDHRINLTLYKLDEIITGDLDNLVQPLINEHQ 351


>gi|311745348|ref|ZP_07719133.1| peptide chain release factor 1 [Algoriphagus sp. PR1]
 gi|126577889|gb|EAZ82109.1| peptide chain release factor 1 [Algoriphagus sp. PR1]
          Length = 358

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 116/350 (33%), Positives = 180/350 (51%), Gaps = 12/350 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN-- 69
           + D      +R   +      P    ++ +   L +E + L+  +S   E    L +   
Sbjct: 1   MLDKLQALKERFEEVGQLIILPDSMADMSKYAKLTKEYKDLEKIVSAYDEYSLVLQNITS 60

Query: 70  -LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGG 127
              +L+   + +   + +   D L+  K E+E +  +  +     DS D  LE+  G+GG
Sbjct: 61  SKEMLDKEKDPEFREMAKLEIDELRSRKDELEEELKQLLIPKDPNDSKDCILEIRGGSGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY R+ E + +K   L++  G   G K     + G + YG LK E GV
Sbjct: 121 DEASIFAGDLFRMYERFCEMQGWKLTVLDLTFGSAGGYKEIIATVSGADVYGMLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +S+ V P   D +E+ +  +D R DTY +SG GGQ VNTT 
Sbjct: 181 HRVQRVPATESQGRVHTSAASVAVLP-EMDEVEVHLDMNDVRKDTYCSSGPGGQSVNTTY 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+VV CQ E+SQ KN  +A  +LR++LYE+EL K  E  ++G   K+ +G
Sbjct: 240 SAVRLTHNPTGLVVTCQDEKSQIKNFEKALKVLRSRLYEIELAKHNE--SVGAQRKSMVG 297

Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            G +   IR+Y       V D R N    +  DV+DG +++F+ A    +
Sbjct: 298 SGDRSDKIRTYNYS-QSRVTDHRINKTVYNLPDVMDGHIEEFISALRLAE 346


>gi|238783270|ref|ZP_04627295.1| Peptide chain release factor 1 [Yersinia bercovieri ATCC 43970]
 gi|238715863|gb|EEQ07850.1| Peptide chain release factor 1 [Yersinia bercovieri ATCC 43970]
          Length = 360

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 117/337 (34%), Positives = 175/337 (51%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     KE +    D      +
Sbjct: 9   LEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSAQEDIEAAEMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE       R +   +  Q   L     D  D +LE+ AG GG E+  +A
Sbjct: 69  LDDLEMREMAQEELKEAKARSEELEQQLQLLLLPKDPDDERDCFLEIRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             + RMY+R+AE R++K E +   +GE  G K     + G  A+G LK E G HR+ R+ 
Sbjct: 129 GDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGEGAFGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR+         +  +G G    +
Sbjct: 249 IPTGLVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQ--LAEASERRNLLGTGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQ 342


>gi|330828702|ref|YP_004391654.1| peptide chain release factor 1 [Aeromonas veronii B565]
 gi|328803838|gb|AEB49037.1| Peptide chain release factor 1 [Aeromonas veronii B565]
          Length = 362

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 115/341 (33%), Positives = 180/341 (52%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     +P +  +    + L RE   L++ +   +  +    D      +
Sbjct: 9   LEGLIERHEEVQAMLGEPDVVSDQDRYRALTREYAQLEDIVHAFQRYRQAQDDLETTQMM 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D         +       ++   +  Q   L     D N+ YLE+ AGAGG E+  
Sbjct: 69  LEEDDADLREMAQEELPLAKANLEALEQELQLMLLPKDPKDDNNCYLEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE++ ++   +  +DGE  G K     I G   YG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRFAERQGWRVSIVSCNDGEYGGYKEVIAKIDGERVYGRLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P V ++ +IEI+ SD +IDT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRVHTSACTVAVLPEVPEAEQIEINPSDLKIDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ ERSQHKN+A+A ++L A+L   E ++         + +  +G G   
Sbjct: 249 THLPTGLVVECQDERSQHKNRAKAMSVLSARLQAAEDERHRAAEQ--STRRNLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            +IR+Y   P   + + R N+     S++L+GDLD  +   
Sbjct: 307 ERIRTYNY-PQGRLSEHRINLTLYRLSEILEGDLDCVITPL 346


>gi|257452575|ref|ZP_05617874.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_5R]
 gi|257466434|ref|ZP_05630745.1| peptide chain release factor 1 [Fusobacterium gonidiaformans ATCC
           25563]
 gi|315917590|ref|ZP_07913830.1| peptide chain release factor 1 [Fusobacterium gonidiaformans ATCC
           25563]
 gi|317059115|ref|ZP_07923600.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_5R]
 gi|313684791|gb|EFS21626.1| peptide chain release factor 1 [Fusobacterium sp. 3_1_5R]
 gi|313691465|gb|EFS28300.1| peptide chain release factor 1 [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 359

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 123/352 (34%), Positives = 181/352 (51%), Gaps = 12/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +  V R   L+T    P +  +  +     +    L   I   KE +    D   
Sbjct: 1   MFDKLEEVVARYEELHTLLSSPEVLNDPKKMIECNKNLNALTPLIEKYKEYKAVKDDVEF 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
           + E    E D  +     + L+  + ++   + E           D N+  +E+  GAGG
Sbjct: 61  IKESLKTEKDEDMRSMMQEELKENEEQMPELEKELKILLLPKDPNDDNNVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNAYGWLKGEQG 186
            E+  +A  L RMY R+AE++K+K E +E  D E   G+K     I+G  AY  LK E G
Sbjct: 121 DEAAIFAGDLFRMYCRYAERKKWKIEIIEKQDLEGLDGLKEVAFSIQGFGAYSKLKFESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS +++ V P V+D  E+ I   D +IDTYR+ GAGGQHVN T
Sbjct: 181 VHRVQRVPKTESAGRIHTSTATVAVLPEVEDITEVHIDPKDLKIDTYRSGGAGGQHVNMT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTGV+VQCQ ERSQ KN+ +A   L +KL E+E++K+          + ++
Sbjct: 241 DSAVRITHLPTGVIVQCQDERSQLKNREKAMKHLASKLLEMEVEKQRSEIEG--ERRLQV 298

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   + D R  +        LDGDLD+ + A +   +
Sbjct: 299 GTGDRAEKIRTYNF-PQGRITDHRIKLTVHQLEAFLDGDLDEMIDALITFSQ 349


>gi|325474790|gb|EGC77976.1| peptide chain release factor 1 [Treponema denticola F0402]
          Length = 361

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 119/347 (34%), Positives = 182/347 (52%), Gaps = 12/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            DN  +RL  +  + E+P+L ++V + K  MRE  +L   +                  L
Sbjct: 5   LDNLRKRLVEVEKEVENPNLIKDVAKYKETMREHSYLSKLMEEYDNYLSIEKQIEDSKLL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  + +   + L  ++   E  +       +     +  +  +E+  G GG E+ 
Sbjct: 65  IQEESDAELKEMAREELHSLEAAFEKSEADLKMLLIPPDPLEEKNIIMEIRGGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYT +AE + +K E L +++ E  G K  T  I G   YG L+ E GVHR+ 
Sbjct: 125 LFAADLFRMYTHYAEMKNWKYEVLSLNETELGGYKEITFSISGKYVYGSLRYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   + + R HTS  ++ V P  +++    I++ D RID  RA G GGQ VNTTDSAVR
Sbjct: 185 RVPETEGSGRIHTSAVTVAVLPEAEETEIE-INQEDLRIDVMRAGGPGGQCVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV CQ E+SQ KNKA+A  +LR++LY+LE  K++      ++ K+++G G  
Sbjct: 244 ITHIPTGLVVICQDEKSQIKNKAKAMRVLRSRLYDLEESKKQAER--AQNRKSQVGSGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA-TLAIK 354
             +IR+Y   P   V D R N+       V+ G LD+ + A  +A +
Sbjct: 302 SERIRTYNF-PQNRVTDHRINLTLYKLDSVMQGSLDELIDALCIAAR 347


>gi|225874213|ref|YP_002755672.1| peptide chain release factor 1 [Acidobacterium capsulatum ATCC
           51196]
 gi|254790854|sp|C1F2J1|RF1_ACIC5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|225791643|gb|ACO31733.1| peptide chain release factor 1 [Acidobacterium capsulatum ATCC
           51196]
          Length = 358

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 101/347 (29%), Positives = 177/347 (51%), Gaps = 11/347 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +    R   L  +  DP L  +  + +   ++ + L++ +   +E ++       
Sbjct: 1   MFERLEQIETRYEELGREMADPALIADQQKYQKTAKQHRELEDVVEKFREYREVQNGIAD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              +  E D         +     +         +   L     D  +  +E+ AG GG 
Sbjct: 61  ARGMMNEADAEIRAMAEEELASLEERLPQIEADLKLLLLPKDPNDEKNVVVEIRAGTGGD 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  + RMY R+AE+R++K E L + +    G K    +I+G + Y  +K E GVH
Sbjct: 121 EASLFAAEVFRMYARYAEQRRWKVEVLSMSESSVGGAKEVIAIIEGDHVYSQMKYESGVH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS  ++ V P   + ++++I   D RIDT+ +SG GGQ VNTT S
Sbjct: 181 RVQRVPATETQGRVHTSAITVAVLP-EAEEVDVKIEAKDLRIDTFCSSGPGGQSVNTTYS 239

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PT  VV CQ E+SQ KN+ +A  +LR++LYE+E++++++   + +  K ++G 
Sbjct: 240 AVRITHLPTNTVVSCQDEKSQIKNREKAMRVLRSRLYEVEMERQQQ--ALAKERKQQVGS 297

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G    +IR+Y   P   + D R  +     ++V++G L   + A  A
Sbjct: 298 GDRSEKIRTYNF-PQNRLTDHRIGLTIHQLAEVMEGRLQPVIDALTA 343


>gi|260063027|ref|YP_003196107.1| peptide chain release factor 2 [Robiginitalea biformata HTCC2501]
 gi|88784596|gb|EAR15766.1| peptide chain release factor 2 [Robiginitalea biformata HTCC2501]
          Length = 313

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 143/308 (46%), Positives = 204/308 (66%), Gaps = 2/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+    L   +   +  +  L D  +++E     +                  +E  +F 
Sbjct: 1   MKRLDTLKGWVEEFETAESLLSDLEVMVEFHEAGEVAEEEVARHLKRAT--DAIEKLEFR 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LS E D   A L++ AGAGGTES DWA+ML+RMY  W+EK  +K   L   +G+ AGI
Sbjct: 59  NMLSDEGDDLTAVLQITAGAGGTESCDWASMLMRMYMMWSEKNGYKVRELNYQEGDVAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ TL I+GP A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+ DDSIEIEI+ 
Sbjct: 119 KTVTLEIEGPFAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDSIEIEINP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D  I T R+SGAGGQ+VN  ++ V++ H PTG+ + C   RSQH N+A A  ML+++LY
Sbjct: 179 ADIEITTARSSGAGGQNVNKVETKVQLVHKPTGIQISCSDSRSQHDNRATALKMLKSQLY 238

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+K++E     ESSK +I WG QIR+YV+ PY++VKD+RT  E  +   V+DG+++D
Sbjct: 239 EIELRKKQEAREAIESSKMKIEWGSQIRNYVMHPYKLVKDVRTGEETGNVDAVMDGEIND 298

Query: 346 FMKATLAI 353
           F+KA L +
Sbjct: 299 FLKAFLMM 306


>gi|298245470|ref|ZP_06969276.1| peptide chain release factor 1 [Ktedonobacter racemifer DSM 44963]
 gi|297552951|gb|EFH86816.1| peptide chain release factor 1 [Ktedonobacter racemifer DSM 44963]
          Length = 358

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 119/344 (34%), Positives = 184/344 (53%), Gaps = 5/344 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   LN     P +  ++   +   RE+  L   +    E+ D         E+
Sbjct: 7   LATLATRYEELNNLMAQPDVLTDISLLQRYGREQSELSTVVEKYHELIDTDKQIKEAQEM 66

Query: 76  ALEED---DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
              E+        +E      R +  +E  Q   L     D  +A + +  GAGG E+  
Sbjct: 67  YDSEEGELRDMAFEELEQLKARKEQLLEDVQVALLPKDIMDEKNAVVTIQGGAGGDEAAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+A+ R++K E L+ +D E+ G K  T +I+G  AY  +K E G HR+ R
Sbjct: 127 FAADLFRMYSRYADGRRWKIEILDGNDTEQGGFKDITFVIRGKGAYSRMKYEGGTHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++N R HTS + + V P  DD I+IE+ ++D R+D YR++G GGQ VNTTDSAVRI
Sbjct: 187 VPSTEANGRIHTSTAKVIVLPEADDDIQIEVKDADIRVDVYRSTGHGGQSVNTTDSAVRI 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQ 311
           TH+PTG+VV CQ E+SQ KNK +A N+L+++L++LE  KR+E       S+ + G    +
Sbjct: 247 THLPTGLVVTCQDEKSQLKNKQKALNVLKSRLWDLEEAKRQEELGKARRSQVQTGDRSEK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R  + + +   +LDG LD+F+   + + +
Sbjct: 307 IRTYNF-PQDRVTDHRIGLTRHNLPGILDGSLDEFIDNLITVDQ 349


>gi|209694372|ref|YP_002262300.1| peptide chain release factor 1 [Aliivibrio salmonicida LFI1238]
 gi|238058709|sp|B6EHH5|RF1_ALISL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|208008323|emb|CAQ78475.1| peptide chain release factor 1 [Aliivibrio salmonicida LFI1238]
          Length = 362

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 116/339 (34%), Positives = 181/339 (53%), Gaps = 9/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  +  + + L RE   L+      +  +    D +   E+
Sbjct: 9   LETLVERYEEVQHLLGDPGVIGDQNKFRALSREYSQLEEVTQCFQAYEKVQEDLVAAQEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           A E+D         +  +  +         Q   +     D  + +LE+ AGAGG E+  
Sbjct: 69  AQEDDAEMREMAQDEIKEAKEASERLTDELQVLLIPKDPNDERNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AEK+ ++ E +  H  E+ G K     + G  AYG LK E G HR+ R
Sbjct: 129 FAGNLFRMYSRFAEKKGWRIEVMSSHASEQGGFKEMIAKVSGDGAYGILKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  +I V   + ++   EI  SD +IDT+R+SGAGGQHVNTTDSA+RI
Sbjct: 189 VPETESQGRVHTSACTIAVMAEIPEADLPEIKSSDLKIDTFRSSGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG VV+CQ ERSQHKNKA+A ++L A++ + E  +R  +  + ++ +  +G G   
Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMSVLAARIIQAEEARRAAV--VSDTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +IR+Y   P   V D R N+     ++V++GDL   ++
Sbjct: 307 DRIRTYNY-PQSRVSDHRINLTIYRLNEVMEGDLAALIE 344


>gi|968930|gb|AAC43437.1| peptide chain release factor 1 [Escherichia coli]
          Length = 360

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 179/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+      ++ +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            R+Y   P   V D R N+      +V++G LD  ++  +   +
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 349


>gi|124265716|ref|YP_001019720.1| peptide chain release factor 1 [Methylibium petroleiphilum PM1]
 gi|166223569|sp|A2SD46|RF1_METPP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|124258491|gb|ABM93485.1| bacterial peptide chain release factor 1 (bRF-1) [Methylibium
           petroleiphilum PM1]
          Length = 359

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 124/345 (35%), Positives = 188/345 (54%), Gaps = 7/345 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
              D  V+RL+ L++   DP + ++    + L RE   +   +   +    R  D     
Sbjct: 7   LQLDRYVRRLAELDSLLADPAVMRDAGGFRALSREHVEVSGIVERQRRHAQRERDLAAAA 66

Query: 74  ELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           E+A + +  ++  E + + Q          Q   L     D+   +LE+ AG GG ES  
Sbjct: 67  EMASDPELAAMAAEEAASAQAELDRLATELQRLLLPRDPDDARSVFLEIRAGTGGDESAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LLRMYTR+AE++ ++ E L   D E  G K     I+G   +G LK E G HR+ R
Sbjct: 127 FAGDLLRMYTRYAERKGWRVELLSASDSELGGYKEVVARIEGDAVFGHLKYESGGHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V    D++ E+ ++ +D RIDTYRASGAGGQHVN TDSAVRI
Sbjct: 187 VPATETQGRIHTSACTVAVLAEPDEAQEVTLNPADLRIDTYRASGAGGQHVNKTDSAVRI 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+V +CQ +RSQH+NKA+A  +L A+L + +  +R+  A    + K+ IG G   
Sbjct: 247 THLPTGLVAECQDDRSQHRNKAKAMAVLAARLRDKDRLERQ--AREAATRKSLIGSGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +IR+Y   P   + D R N+       ++DGDLD  +KA +A +
Sbjct: 305 DRIRTYNF-PQGRLTDHRINLTLYQLGAIMDGDLDPVVKALVAAR 348


>gi|158317542|ref|YP_001510050.1| peptide chain release factor 2 [Frankia sp. EAN1pec]
 gi|158112947|gb|ABW15144.1| peptide chain release factor 2 [Frankia sp. EAN1pec]
          Length = 386

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 144/337 (42%), Positives = 204/337 (60%), Gaps = 4/337 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D +   +R   L  +  DP LW +   A+ + R    +   I  ++ +
Sbjct: 32  LDATLAGIATVLDVEGLRRRAQALEQEAADPDLWSDQDRAQAVTRRLSAVKGDIGRVEGL 91

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           + RL D +      L+  D  +L E + +L  +  ++   +  +LLSGE D  DA +++ 
Sbjct: 92  RRRLDDLIAA----LDLGDDDLLTEAAADLPALARDISTLEVRTLLSGEYDERDAIVQLS 147

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGG ++ DW  MLLRMY RWAE+  + TE  +  + EEAG+KSAT  +K P AYG L+
Sbjct: 148 AGAGGVDAADWTAMLLRMYLRWAERHGYATEVFDTSEAEEAGLKSATFQVKCPYAYGTLR 207

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHRLVRISP+D+ +RR TSF+ + V P V+ S  ++I E + RID +R+SG GGQ 
Sbjct: 208 SEHGVHRLVRISPFDNQNRRQTSFAGVEVTPAVEVSDHVDIDEKELRIDIFRSSGPGGQG 267

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PT +VV CQ ERSQ +NKA A  +L+AKL E    +           
Sbjct: 268 VNTTDSAVRITHLPTNIVVTCQNERSQLQNKAAAMMVLQAKLLERRRAEEAAEKQRLTGG 327

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
             ++ +G QIR+YVL PYQMVKDLRT +E ++ + VL
Sbjct: 328 PQDVSFGSQIRNYVLHPYQMVKDLRTEVETSNTNAVL 364


>gi|332342793|gb|AEE56127.1| peptide chain release factor protein PrfA [Escherichia coli UMNK88]
          Length = 360

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 114/344 (33%), Positives = 178/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+      ++ +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + D+   +I  +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDIKPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            R+Y   P   V D R N+      +V++G LD  ++  +   +
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 349


>gi|332295519|ref|YP_004437442.1| Peptide chain release factor 1 [Thermodesulfobium narugense DSM
           14796]
 gi|332178622|gb|AEE14311.1| Peptide chain release factor 1 [Thermodesulfobium narugense DSM
           14796]
          Length = 361

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 128/343 (37%), Positives = 183/343 (53%), Gaps = 10/343 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLE 74
             + R   +N       +  N  +   L +E+  L+  ++   E+   ++ L D   L  
Sbjct: 12  KLINRYKEINELLSSLEIINNPSKLISLSQEKAELEEVVNNYNELNKLKNYLSDLKELKN 71

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
              EE      +E     + I+          L     D  +  LE+ AGAGG E+  +A
Sbjct: 72  SEDEEIKALAEEEFQVVEKNIENLESKLLNFILPKDPLDEKNIILEIRAGAGGEEAALFA 131

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           + LLRMY R+AE++  KTE L I++    GIK A + IKG   Y  LK E G HR+ R+ 
Sbjct: 132 SELLRMYLRYAERKNAKTEILSINETGIGGIKEAIISIKGKRIYSRLKFESGTHRVQRVP 191

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   D I+I I E D +IDT+RA GAGGQHVN TDSAVRITH
Sbjct: 192 ETESGGRIHTSTATVAVLP-EADEIDITIDEKDLKIDTFRAGGAGGQHVNKTDSAVRITH 250

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV CQ ERSQ +NK +A  +L AK+  LE ++      I  S + ++G G    +
Sbjct: 251 LPTGIVVACQDERSQFQNKEKAMRILAAKI--LEEKRVASEKEIAMSRRIQVGSGDRSEK 308

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IR+Y   P   V D R N+     ++VLDGDLD+ + A +A +
Sbjct: 309 IRTYNF-PQGRVTDHRINLTLYRLNEVLDGDLDEIIDALIAAE 350


>gi|296327945|ref|ZP_06870480.1| peptide chain release factor RF1 [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|296154901|gb|EFG95683.1| peptide chain release factor RF1 [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 365

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 122/359 (33%), Positives = 185/359 (51%), Gaps = 13/359 (3%)

Query: 7   LNCLGG--LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           +  L G  +FD  +  V R   LN     P +  +  +     +    +   +   KE +
Sbjct: 1   MINLRGVKMFDKLEEVVARYDELNKMLVSPEVLADSKKMIECNKAINEITEIVEKYKEYK 60

Query: 64  DRLCDNLILLELALEEDDCSILQE----TSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
             + D   + E    E D  + +       +  +++    E  +   L   + D  +  +
Sbjct: 61  KYVDDIEFIKESFKTEKDSDMKEMLNEELKEAEEKLPKLEEELKILLLPKDKNDDKNVIV 120

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           E+  GAGG E+  +A  L RMY+R+AE++K+K E +E  DGE  GIK     I G  AY 
Sbjct: 121 EIRGGAGGDEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELGGIKEIAFTIIGLGAYS 180

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            LK E GVHR+ R+   +++ R HTS +++ V P V+D  E+ +   D +IDTYR+ GAG
Sbjct: 181 RLKFESGVHRVQRVPKTEASGRIHTSTATVAVLPEVEDIQEVTVDPKDLKIDTYRSGGAG 240

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQHVN TDSAVRITH+PTG+VVQCQ ERSQ KN+ +A   L  KLYE+E +K+       
Sbjct: 241 GQHVNMTDSAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQRSEVE-- 298

Query: 300 ESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              + ++G G    +IR+Y   P   + D R  +        LDGD+D+ + A +   +
Sbjct: 299 SERRLQVGTGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQ 356


>gi|304415271|ref|ZP_07395967.1| peptide chain release factor 1 [Candidatus Regiella insecticola
           LSR1]
 gi|304282877|gb|EFL91344.1| peptide chain release factor 1 [Candidatus Regiella insecticola
           LSR1]
          Length = 360

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 118/337 (35%), Positives = 182/337 (54%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +R   +     D  +  + +  + L RE   L +     K+      D     ++
Sbjct: 9   LQALQERYEEVEAHLGDAEVISDQLRFRTLSREYAQLKDISLCFKQWDGLQEDIETAKKM 68

Query: 76  ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+     +   +   +  Q   L     D  D +LE+ AG GG E+  +A
Sbjct: 69  LDDLEMRELAQDELKEAKIRSEALEQKLQVLLLPQDPDDERDCFLEIRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             + RMY+R+AE R++K E + I++GE+ G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDMFRMYSRYAETRRWKMEVININEGEKGGYKEVITKITGNGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V PV+ ++  +EIS++D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 KTESQGRIHTSACTVAVMPVLPETEVLEISDNDLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++ E E QKR++        +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKAKSVLAARIREAERQKRQQTQ--ASERRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 SRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDILIE 342


>gi|317153066|ref|YP_004121114.1| peptide chain release factor 1 [Desulfovibrio aespoeensis Aspo-2]
 gi|316943317|gb|ADU62368.1| peptide chain release factor 1 [Desulfovibrio aespoeensis Aspo-2]
          Length = 355

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 112/346 (32%), Positives = 177/346 (51%), Gaps = 11/346 (3%)

Query: 13  LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F   ++   +   L  +   P ++ +    K + +    L + +   +E +    D   
Sbjct: 1   MFGKLEDIEIKYDKLEYELAQPGIFNDQERYKKVSKAHSDLSDVVVLYREYKKCSKDLAE 60

Query: 72  LLELALEEDDCSILQ---ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
             E++ + D         E S+   RI+   E  +   L S   D  +  LE+ AG GG 
Sbjct: 61  NREMSHDPDPEIREMAKAEISELEDRIETLEEKIKILLLPSDPMDEKNIILEIRAGTGGD 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMYTR+AE  ++K E +  +     G+K     I G   Y  LK E G H
Sbjct: 121 EAGLFAADLYRMYTRYAEANRWKVEEMSSNVTGSGGLKEVIASIAGDKVYSKLKYESGTH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ + P   + ++I++   D R+D +R+SG GGQ VNTTDS
Sbjct: 181 RVQRVPATESQGRIHTSVVTVAIMP-EAEEVDIDLRPEDVRVDVFRSSGPGGQSVNTTDS 239

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           A+R+THIPTG++V CQ E+SQHKNKA+A  +LR++L +LE  K    A    + + ++G 
Sbjct: 240 AIRVTHIPTGMIVICQDEKSQHKNKAKALKVLRSRLLQLEQDK--AKAEEDAARRIQVGS 297

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G    +IR+Y   P   V D R N+       +L+G+LDD   A +
Sbjct: 298 GDRSERIRTYNF-PQGRVSDHRINLTLHKLPQILEGELDDLTDALI 342


>gi|124515209|gb|EAY56720.1| Peptide chain release factor 1 [Leptospirillum rubarum]
          Length = 361

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 186/344 (54%), Gaps = 8/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   ++ K  DP + +N      L R++  L   +S  +     +     L EL
Sbjct: 14  LESMRERYREISGKMADPEVSRNPAIYMKLARDQSELSAIVSLYEHYLRIIDQQKDLQEL 73

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   ++ +    L     +VE +  +S+    E DS + +LE+ AGAGG E+  +A
Sbjct: 74  RQDPEFLDLVPQEEKKLSLELQDVESRLLDSILPRDERDSRNLFLEIRAGAGGEEAALFA 133

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+ E++ F+ E +E +D E  G +   + ++G  A+  LK E GVHR+ R+ 
Sbjct: 134 RELARMYLRFIERKGFRFEVMETNDTEIGGARETIIYVQGHGAFSQLKFESGVHRVQRVP 193

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ + P     ++++I   D RIDT+ AS AGGQ VNTT SAVRITH
Sbjct: 194 VTEAGGRIHTSTVTVAMIP-EASEVDVQIDPKDLRIDTFCASSAGGQSVNTTYSAVRITH 252

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PT +VV CQ ERSQ KNKA+A  +LRA+L E E  ++ E   I    K+++G G    +
Sbjct: 253 LPTNIVVSCQDERSQLKNKAKAMKVLRARLMEKEQTRQNE--QIASDRKSQVGTGDRSER 310

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R  +       V++G++D F+ A  A ++
Sbjct: 311 IRTYNF-PQNRVTDHRIGMTLYQLDQVMEGNIDPFVDALRAQER 353


>gi|227510126|ref|ZP_03940175.1| peptide chain release factor 1 [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227190331|gb|EEI70398.1| peptide chain release factor 1 [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 357

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 108/352 (30%), Positives = 181/352 (51%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68
           +FD     V R   LN    DP +  +      L +E   L + ++   + +    +L D
Sbjct: 4   IFDKLQAVVDRYDELNELISDPEVIADTQRFMKLSKEEGELRDTVAAYNKYKEVSKQLDD 63

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAG 126
           +  +L   +++ D   + +   +  + +      Q + +       D  +  +E+H  AG
Sbjct: 64  DEEMLREKIDDADLESMVKDEISDFKDQKAKLEDQLKVMLLPKDPNDEKNIIMEIHGAAG 123

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E   +A  L  MY+++AE++ +K E ++  + E  G K   L+I G   Y  LK E G
Sbjct: 124 GDEGSLFAADLFSMYSKYAERQGWKVEVIDKSETEVGGFKEIVLMITGDKVYSKLKYENG 183

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P  ++ ++I+I   D R+D YR+SGAGGQH+N T
Sbjct: 184 AHRVQRVPVTESAGRVHTSTATVGVMP-EEEDVDIDIDPKDIRVDVYRSSGAGGQHINKT 242

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L+A++Y+   Q+  E        K+ I
Sbjct: 243 SSAVRMTHLPTGIVVAMQDERSQQQNRAKAMKILKARVYDYYAQQ--EQDQYNAERKSAI 300

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       +++G+LDD + A +   +
Sbjct: 301 GTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMNGELDDIVDALILSDQ 351


>gi|167750775|ref|ZP_02422902.1| hypothetical protein EUBSIR_01753 [Eubacterium siraeum DSM 15702]
 gi|167656210|gb|EDS00340.1| hypothetical protein EUBSIR_01753 [Eubacterium siraeum DSM 15702]
 gi|291530723|emb|CBK96308.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium
           siraeum 70/3]
 gi|291557765|emb|CBL34882.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium
           siraeum V10Sc8a]
          Length = 358

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 105/348 (30%), Positives = 174/348 (50%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +N K  D ++  +  + K LM+E ++L   I   +  +    D     ++
Sbjct: 5   LEITEKRFDEINEKLTDINVINDQEQYKSLMKELKNLTPIIEKYRMYKTARSDFEEAEQM 64

Query: 76  ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +       +E            +    +  +   L     D  +  +E+  GAGG E+
Sbjct: 65  LSDGGLDKDFKEIVQEQYESNKKLMDEYTDELKILLLPKDPDDDRNVIIEIRGGAGGEEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +AN + RMY+ +A+ + +KTE +  +  E  G K  +  ++G   Y  LK E GVHR+
Sbjct: 125 ALFANSMFRMYSMYAQTKGWKTEVISSNPTELGGYKEISFSVEGEGVYAKLKYESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R  TS  ++ V P   + +++EI+ +D    TYR+SGAGGQH+N T+SA+
Sbjct: 185 QRVPETEAQGRIQTSTITVAVLP-EVEEVDVEINPADLEFQTYRSSGAGGQHINKTESAI 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H PTGVVV+CQ+ERSQ+KNK +A  ML +KLYE +L ++   + I    K ++G G 
Sbjct: 244 RIIHHPTGVVVECQEERSQYKNKDKAMKMLYSKLYEAKLNEQN--SKIAAERKIQVGTGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +        ++GD D+   A     +
Sbjct: 302 RSERIRTYNY-PQSRVTDHRIGLTLYKLEQFMNGDCDEVFDALAIADR 348


>gi|307546434|ref|YP_003898913.1| peptide chain release factor 2 [Halomonas elongata DSM 2581]
 gi|307218458|emb|CBV43728.1| peptide chain release factor 2 [Halomonas elongata DSM 2581]
          Length = 301

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 167/299 (55%), Positives = 214/299 (71%), Gaps = 1/299 (0%)

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
            +  I  ++  L DN  LLELA  E+D   + E S  L+ ++ ++E  +F  + +GE D 
Sbjct: 2   VVDTIDTLERGLNDNRDLLELAEMEEDADTVDEVSRELESLRADLEKLEFRRMFAGEMDP 61

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
           N+AYL++ AG+GGTE+QDWANMLLRMY RWAE   FK + +E+  GE AGIKSAT+ I+G
Sbjct: 62  NNAYLDIQAGSGGTEAQDWANMLLRMYLRWAEHHGFKADLIELSAGEVAGIKSATVHIQG 121

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             A+GWL+ E GVHRLVR SP+DS  RRHTSF+S+++ P VDDS E+EI+ SD R+DTYR
Sbjct: 122 EYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFASVFLSPEVDDSFEVEINPSDLRVDTYR 181

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +SGAGGQHVNTTDSAVRITH PTG+VV CQ +RSQH N+  A   LRAKL+E E+ KR  
Sbjct: 182 SSGAGGQHVNTTDSAVRITHEPTGIVVACQSQRSQHANRDFAMKQLRAKLWEHEMDKRNA 241

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
                E SK +IGWG QIRSYVL     +KDLRT ++ +S   VLDGDLD F++A+L  
Sbjct: 242 AKQAAEDSKADIGWGSQIRSYVLDDQ-RIKDLRTGVQSSSCEKVLDGDLDQFIEASLKQ 299


>gi|312879994|ref|ZP_07739794.1| bacterial peptide chain release factor 1 (bRF-1) [Aminomonas
           paucivorans DSM 12260]
 gi|310783285|gb|EFQ23683.1| bacterial peptide chain release factor 1 (bRF-1) [Aminomonas
           paucivorans DSM 12260]
          Length = 357

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 120/346 (34%), Positives = 185/346 (53%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72
            +      S + ++  DP L  N+ E   L +    L   ++ ++E +    R+ D   L
Sbjct: 7   LEEIESTFSEIESRMVDPALSSNLQEMHALGKRHSELSPIVAALREYRGVLRRIQDAREL 66

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L    E       +E S   ++++   +  +   L     D+ D  +E+ AGAGG E+  
Sbjct: 67  LSQEDEGLRELAKEELSTLEEQVEPLEQRIKVLLLPQDPNDAKDVVIEIRAGAGGEEAAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY R+AE+  + +E L  +D    G K     +KG   Y  LK E GVHR+ R
Sbjct: 127 FAADLFRMYNRFAEREGWGSELLSTNDTGIGGYKEVVFHLKGTGVYSKLKYESGVHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           I   ++  R HTS +++ V P   + +++++   D +IDTYRASGAGGQ+VN TDSAVRI
Sbjct: 187 IPVTEAGGRIHTSTATVAVLP-EAEEVDVQVRTEDLKIDTYRASGAGGQYVNMTDSAVRI 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV CQ ERSQ KN+ +A  +LR +LY+LELQK++ +  +    K ++G G   
Sbjct: 246 THVPTGLVVTCQDERSQLKNRVKAMQLLRTRLYDLELQKQQAV--MAAERKGQVGTGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R          VLDGDL + ++A    ++
Sbjct: 304 ERIRTYSY-PQNRLTDHRIGFTLYKLDQVLDGDLYELVEALTVAEQ 348


>gi|39998194|ref|NP_954145.1| peptide chain release factor 1 [Geobacter sulfurreducens PCA]
 gi|61214645|sp|Q748B1|RF1_GEOSL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|39985140|gb|AAR36495.1| peptide chain release factor 1 [Geobacter sulfurreducens PCA]
 gi|298507132|gb|ADI85855.1| peptide chain release factor 1 [Geobacter sulfurreducens KN400]
          Length = 355

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 116/343 (33%), Positives = 178/343 (51%), Gaps = 9/343 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +    R   L +   DP +  N  E + L RE   L   I   +  +  L +   
Sbjct: 1   MFEKIEELEVRYHELESLLADPAVLGNQPEFRRLSREHNDLTPLIESYRTYKKVLEEMEG 60

Query: 72  LLELALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             EL  + +   +   E  +  QR +      +   L     D  +  LE+ AG GG ES
Sbjct: 61  NRELLADPEMKEMAQAELEELEQRQEELEGEIKLLLLPRDPNDDRNVILEIRAGTGGDES 120

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY+R+AE+ ++K E +   + E  G K    LI+G   +  LK E G HR+
Sbjct: 121 ALFAGDLFRMYSRFAERNRWKVEVMSASESERGGFKEIVALIEGQGVFAKLKYESGTHRV 180

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS  ++ V P   + IE++I+ +D +ID YRASGAGGQHVN T+SAV
Sbjct: 181 QRVPETEAQGRIHTSACTVAVLP-EAEDIEVDINPADLKIDVYRASGAGGQHVNKTESAV 239

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG+VV+CQ ERSQ KN+A+A  +L+ K+ +   Q++   A I    K ++G G 
Sbjct: 240 RITHIPTGIVVECQDERSQIKNRAKAMKVLKTKILDGLHQEQN--ARIAADRKQQVGSGD 297

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              +IR+Y   P   + D R  +       +++GD+ + + A 
Sbjct: 298 RSERIRTYNF-PQGRMTDHRIGLTLYRLDSLMEGDIAEVVDAL 339


>gi|300814565|ref|ZP_07094819.1| peptide chain release factor 1 [Peptoniphilus sp. oral taxon 836
           str. F0141]
 gi|300511333|gb|EFK38579.1| peptide chain release factor 1 [Peptoniphilus sp. oral taxon 836
           str. F0141]
          Length = 358

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 110/343 (32%), Positives = 173/343 (50%), Gaps = 11/343 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
             R + L     D ++  N    +    E   L   +S  +E +    +      L  E+
Sbjct: 9   EDRYNELEKSLMDINVINNSSLYQKTAIEHAELQPIVSKYREYKKTKENLNDSKALLAEK 68

Query: 80  DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
            D  +     D++   +  +E  +       +     D  +  +E+ AGAGG E+  +A 
Sbjct: 69  LDDDMKDLVKDDISTNEKNLEKIEEDLKILLIPKDPNDKKNVMVEIRAGAGGDEAALFAG 128

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L R Y R+AE+  +K + +  ++    G K    +I G  AY  LK E GVHR+ R+  
Sbjct: 129 TLFRQYVRYAERCGWKVDIISTNEIGIGGYKEVVFMIIGRGAYSRLKYESGVHRVQRVPE 188

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS +++ V P   + +E+EI  ++ + D +RASG GGQ VNTTDSAVR+THI
Sbjct: 189 TESGGRIHTSTATVAVLP-EVEDVEVEIDPTEIKFDVFRASGNGGQCVNTTDSAVRLTHI 247

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTG+V+ CQ E+SQ  NK +A  +LRAKLY+L++Q++ E         +++G G    +I
Sbjct: 248 PTGIVISCQDEKSQLMNKEKAMKLLRAKLYDLKIQEQNE--KNSAQRLSQVGTGDRSERI 305

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R+Y   P   V D R N        + DG+LD+ + A  A  +
Sbjct: 306 RTYNY-PQGRVTDHRINYTTHQIDSINDGELDELIDALTAADQ 347


>gi|261340150|ref|ZP_05968008.1| peptide chain release factor 1 [Enterobacter cancerogenus ATCC
           35316]
 gi|288317665|gb|EFC56603.1| peptide chain release factor 1 [Enterobacter cancerogenus ATCC
           35316]
          Length = 360

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 113/337 (33%), Positives = 176/337 (52%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + +    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSKCYTDWRQVQDDIETAQMM 68

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   +  +E  D   R +   +  Q   L     D  +A++EV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQEELQDAKARSEEMEQQLQVLLLPKDPDDERNAFVEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E L  ++GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRVEILSANEGEHGGFKEVIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      + ++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIE 342


>gi|51596331|ref|YP_070522.1| peptide chain release factor 1 [Yersinia pseudotuberculosis IP
           32953]
 gi|81639458|sp|Q66AX5|RF1_YERPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|51589613|emb|CAH21243.1| peptide chain release factor RF-1 [Yersinia pseudotuberculosis IP
           32953]
          Length = 360

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 116/337 (34%), Positives = 174/337 (51%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     KE +    D      +
Sbjct: 9   LEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSAQDDIEAAEMM 68

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   +  +E      R +   +  Q   L     D  D +LE+ AG GG E+  +A
Sbjct: 69  LDDLEMREMAQEELKIAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             + RMY+R+AE R++K E +   +GE  G K     I G   +G LK E G HR+ R+ 
Sbjct: 129 GDMFRMYSRYAETRRWKVEIMSASEGEHGGYKEVIAKISGDGVFGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVMPAIPEAELPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR+         +  +G G    +
Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQ--LAEASERRNLLGTGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQ 342


>gi|323496829|ref|ZP_08101866.1| peptide chain release factor 1 [Vibrio sinaloensis DSM 21326]
 gi|323318088|gb|EGA71062.1| peptide chain release factor 1 [Vibrio sinaloensis DSM 21326]
          Length = 362

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 112/346 (32%), Positives = 180/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72
            +  V+R   +     DP +  +  + + L +E   L+      +  Q    D      +
Sbjct: 9   LETLVERYEEVQHLLGDPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQEDLVAAEEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
                EE      +E  +    I+   +  Q   L     D  + +LE+ AGAGG E+  
Sbjct: 69  ANEDDEEMREMAQEEIKEAKDAIERLSDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AEK+ ++ E +  ++ E  G K     + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSKFAEKKGWRVEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RI
Sbjct: 189 VPATESQGRVHTSACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG VV+CQ ERSQHKNKA+A  +L A++  ++ ++ +  A   ++ +  +G G   
Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARI--IQAEEAKRAAEESDTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+     ++V++GD+   +   +   +
Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTLYRLNEVMEGDVSSLIDPVIQEHQ 351


>gi|331652249|ref|ZP_08353268.1| peptide chain release factor 1 [Escherichia coli M718]
 gi|331050527|gb|EGI22585.1| peptide chain release factor 1 [Escherichia coli M718]
          Length = 360

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 179/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+      ++ +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+A+ R+++ E +   +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYADARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            R+Y   P   V D R N+      +V++G LD  ++  +   +
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 349


>gi|94971498|ref|YP_593546.1| peptide chain release factor 1 [Candidatus Koribacter versatilis
           Ellin345]
 gi|119361503|sp|Q1II28|RF1_ACIBL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|94553548|gb|ABF43472.1| bacterial peptide chain release factor 1 (bRF-1) [Candidatus
           Koribacter versatilis Ellin345]
          Length = 359

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 107/346 (30%), Positives = 171/346 (49%), Gaps = 12/346 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  D    +   L      P +  +  + +   +    L   +   +E +D       
Sbjct: 1   MFERLDLMEAKYDELTQALASPEIVNDSAKYQKTAKAHAELTQLVQKYREYKDLTRGIKD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             ++  EE D  +       L  ++  +   +       L     D  +  +E+ AG GG
Sbjct: 61  SRQMVAEETDAEMKAYAQQELTELEQRLHAVEEDLKVLLLPRDPNDDKNIIVEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY R+AE +++K E L   +    G+K    +I+G  AY  LK E GV
Sbjct: 121 DEASLFAAELFRMYNRYAETQRWKVEVLSSSESGVGGLKEVIAIIEGRGAYSKLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS  ++ V P   + ++I+I   D RIDT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPQTETQGRVHTSAVTVAVLP-EAEEVDIKIEAKDIRIDTFCSSGPGGQSVNTTY 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PT  VV CQ E+SQ KN+ +   +LRA+LYE+E QK+ +   + +  K ++G
Sbjct: 240 SAVRITHLPTNTVVSCQDEKSQIKNREKGMRVLRARLYEVEQQKQAD--ALAKERKQQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            G    +IR+Y   P   V D R        S+ +DG ++  ++A 
Sbjct: 298 SGDRSEKIRTYNF-PQNRVTDHRIGYTVHQLSEFMDGKINALIEAL 342


>gi|288929843|ref|ZP_06423686.1| peptide chain release factor 2, programmed [Prevotella sp. oral
           taxon 317 str. F0108]
 gi|288328944|gb|EFC67532.1| peptide chain release factor 2, programmed [Prevotella sp. oral
           taxon 317 str. F0108]
          Length = 372

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 128/359 (35%), Positives = 205/359 (57%), Gaps = 12/359 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  +   L    D D+    L     +T+ P  W +   A+  M++ + ++  I   KE+
Sbjct: 10  IQERAEALHRYLDIDHKRVELEEEELRTQAPDFWDDPARAQEQMKKVKGIEKWIVGYKEV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +  +  +     DD    +E  ++ ++    VE  +  ++L  + D  D  L+++
Sbjct: 70  RQAADELQLAFDFY--HDDMVTEEEVDEDYRKAITAVENLELMNMLRQKEDPMDCVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWL 181
           +GAGGTESQDWA ML+RMY RWAE    +     + +G+EAGIKS T+ I+ G  AYG+L
Sbjct: 128 SGAGGTESQDWAQMLMRMYMRWAESHGHRVTISNLQEGDEAGIKSVTMEIEGGEYAYGYL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+ +  S    D +R+ GAGGQ
Sbjct: 188 KSENGVHRLVRVSPYNAQGKRMTSFASVFVSPLVDDTIEVYVDPSKVSWDLFRSGGAGGQ 247

Query: 242 HVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  ++ VR+ +  T         ++++  + R Q +N+  A  +L+++LY+  ++KR 
Sbjct: 248 NVNKVETGVRLRYQYTDPDTGEEEEILIENTESRKQLENRNNAMRLLKSQLYDRAMKKRL 307

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           E     E+ K +I WG QIRSYV    + VKD RTN +      V+DG +DDF+KA L 
Sbjct: 308 EAQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTADVDGVMDGKIDDFIKAYLM 365


>gi|261821677|ref|YP_003259783.1| peptide chain release factor 1 [Pectobacterium wasabiae WPP163]
 gi|261605690|gb|ACX88176.1| peptide chain release factor 1 [Pectobacterium wasabiae WPP163]
          Length = 360

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 115/337 (34%), Positives = 177/337 (52%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     +P +  ++   + L RE   L +     ++ Q    D      +
Sbjct: 9   LEALQERHEEVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQQWQQAQEDQQTAEMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE        I+   +  Q   L     D    +LEV AG GG E+  +A
Sbjct: 69  LDDPEMRDMAQEELKEGKATIEALEQQLQVLLLPKDPDDERGCFLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESRRWRVEVVSASEGEHGGYKEVIAKISGDGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V   V ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMAEVPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIRAAEIHKRQQE--EASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           IR+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDTLIQ 342


>gi|297180269|gb|ADI16488.1| protein chain release factor a [uncultured bacterium HF4000_05M23]
          Length = 360

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 121/347 (34%), Positives = 182/347 (52%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R S +      P    +    + L RE   L + +    +I     D     E+
Sbjct: 9   LKEIADRHSEVERLMSQPETASDPNAIRRLGREYSQLQHVVELWNDITRAQSDMEGAREM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              EDD  +L+     ++ ++          + E L   E +  DA +EV AGAGG E+ 
Sbjct: 69  LTAEDDAEVLEMAKVEVEELQERLDSLTAEIRLELLPKDETELADAVVEVRAGAGGDEAG 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  + RMY R+AE RK+K + L  +D    GIK  T  I G  AY  L  E GVHR+ 
Sbjct: 129 LFAAEVFRMYQRYAEARKWKLKILSQNDTGVGGIKEVTFEIAGERAYQRLHLESGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + ++IEIS+ D ++D Y +SGAGGQ VN   +A+R
Sbjct: 189 RVPATESQGRIHTSTATVVVMP-KAEEVDIEISDKDLKVDVYHSSGAGGQSVNKLATAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VVQCQ ERSQ +N+ QA  +LR++L+++EL+K++E   I  + K ++G G  
Sbjct: 248 ITHLPTGLVVQCQNERSQLQNRMQAMEILRSRLWDMELRKQQEE--ISANRKAQVGTGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R          VL G+LD F+ A L  ++
Sbjct: 306 SEKIRTYNF-PQSRITDHRIGYTSHQMQQVLGGELDGFVDALLQEEQ 351


>gi|170723283|ref|YP_001750971.1| peptide chain release factor 2 [Pseudomonas putida W619]
 gi|169761286|gb|ACA74602.1| peptide chain release factor 2 [Pseudomonas putida W619]
          Length = 304

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 167/302 (55%), Positives = 221/302 (73%), Gaps = 1/302 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L   +  + ++   L D   LL++A+EE+D S + +    LQ ++ ++   +F  + SGE
Sbjct: 2   LAQVVETLDKMSGGLADCQDLLDMAVEENDESAVSDVVTELQGLEEKLAQLEFRRMFSGE 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+ +GE AGIK AT+ 
Sbjct: 62  MDMNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVH 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EI+I+ SD RID
Sbjct: 122 IKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIDINPSDLRID 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QK
Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R   +   E SK++IGWG QIRSYVL     +KDLRT +E++  + VLDGD+D +++A+L
Sbjct: 242 RNAASQALEDSKSDIGWGHQIRSYVLDD-SRIKDLRTGVERSDCNKVLDGDIDQYLEASL 300

Query: 352 AI 353
             
Sbjct: 301 KQ 302


>gi|297620931|ref|YP_003709068.1| Peptide chain release factor 1 [Waddlia chondrophila WSU 86-1044]
 gi|297376232|gb|ADI38062.1| Peptide chain release factor 1 [Waddlia chondrophila WSU 86-1044]
          Length = 354

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 185/344 (53%), Gaps = 10/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  + RL  L      P +  +    ++L +E  HL       +++     +     E+
Sbjct: 5   VEEMLNRLPELEELLGQPDVVNDQKRYRLLTQEHAHLSQLKQVYEDLISSRKELSDNEEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E+D   ++   ++++R+  +     +  +   +     D+ +  LE+ AG GG E+ 
Sbjct: 65  FASEEDAEFIKVLEEDIERLTKKTGELQKKLETLIVPPDPKDNKNTILELRAGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +    +RMY  +A++R +K E L     +  G K   + + GPN Y +LK E G HR+ 
Sbjct: 125 LFVGDCVRMYKMFADERGWKYEELASSPSDAGGFKEYMMALSGPNVYRYLKYEGGTHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V    D+  E++I E D R+DTYRASGAGGQHVNTTDSAVR
Sbjct: 185 RVPETETQGRVHTSAITVAVLLEPDEDSEVQIDEKDLRVDTYRASGAGGQHVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+V  C +ERSQHKN+ +A  +L+AK+ E+E QK+ E         +++G G  
Sbjct: 245 LTHIPTGIVAYCSEERSQHKNRDKAMRLLKAKIMEIEAQKKFEER--ASERASQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+ K +   V++GDL++ + A +A
Sbjct: 303 SERIRTYNF-PQNRITDHRINLTKYNLDKVMEGDLEEIVNAIVA 345


>gi|114319440|ref|YP_741123.1| peptide chain release factor 1 [Alkalilimnicola ehrlichii MLHE-1]
 gi|119361505|sp|Q0AC04|RF1_ALHEH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|114225834|gb|ABI55633.1| bacterial peptide chain release factor 1 (bRF-1) [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 361

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 118/346 (34%), Positives = 175/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLIL 72
            +   +R   ++    +P    +      L RE   L+  I   +  +E +  L     +
Sbjct: 9   LERLRERHEEISALLAEPDTASDQKRFAALSREYAQLEPVIAELNHYQETEQALASAREM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
                 E      +E S    R++      Q   L     D  + YLE+ AG GG E+  
Sbjct: 69  ARDDDLEIREMAEEEISQAQARLEALEAELQVLLLPPDPNDGRNLYLEIRAGTGGDEAAL 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LLRMY R+AE+  ++ E +   +GE+ G K     I G  A+  LK E G HR+ R
Sbjct: 129 FAGDLLRMYARYAERHGWRLEEISASEGEQGGYKEVITRISGEGAWSRLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D   +I I+ ++ R+DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDAVEDITINPAELRVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTGVVV+CQ ERSQHKN+AQA  +L+A+L   +    E+ A   E  +  +G G   
Sbjct: 249 THLPTGVVVECQSERSQHKNRAQALALLQARLKNAQQ--AEQSAQQTEQRRQLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N+      ++L GDLD  ++      +
Sbjct: 307 ERIRTYNF-PQGRITDHRINLTLYRLEEILQGDLDQLVEPLRTEHQ 351


>gi|227513055|ref|ZP_03943104.1| peptide chain release factor 1 [Lactobacillus buchneri ATCC 11577]
 gi|227083630|gb|EEI18942.1| peptide chain release factor 1 [Lactobacillus buchneri ATCC 11577]
          Length = 361

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 108/352 (30%), Positives = 181/352 (51%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68
           +FD     V R   LN    DP +  +      L +E   L + ++   + +    +L D
Sbjct: 4   IFDKLQAVVDRYDELNELISDPEVIADTQRFMKLSKEEGELRDTVAAYNKYKEVSKQLDD 63

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAG 126
           +  +L   +++ D   + +   +  + +      Q + +       D  +  +E+H  AG
Sbjct: 64  DEEMLREKIDDADLESMVKDEISDFKDQKAKLEDQLKVMLLPKDPNDEKNIIMEIHGAAG 123

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E   +A  L  MY+++AE++ +K E ++  + E  G K   L+I G   Y  LK E G
Sbjct: 124 GDEGSLFAADLFSMYSKYAERQGWKVEVIDKSETEVGGFKEIVLMITGDKVYSKLKYENG 183

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P  ++ ++I+I   D R+D YR+SGAGGQH+N T
Sbjct: 184 AHRVQRVPVTESAGRVHTSTATVGVMP-EEEDVDIDIDPKDIRVDVYRSSGAGGQHINKT 242

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L+A++Y+   Q+  E        K+ I
Sbjct: 243 SSAVRMTHLPTGIVVAMQDERSQQQNRAKAMKILKARVYDYYAQQ--EQDQYNAERKSAI 300

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       +++G+LDD + A +   +
Sbjct: 301 GTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMNGELDDIVDALILSDQ 351


>gi|238751561|ref|ZP_04613052.1| Peptide chain release factor 1 [Yersinia rohdei ATCC 43380]
 gi|238710279|gb|EEQ02506.1| Peptide chain release factor 1 [Yersinia rohdei ATCC 43380]
          Length = 360

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 116/337 (34%), Positives = 174/337 (51%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     KE +    D      +
Sbjct: 9   LEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSVQDDLEAAEMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE       R +   +  Q   L     D  D +LE+ AG GG E+  +A
Sbjct: 69  LEDLEMREMAQEELKEAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             + RMY+R+AE R++K E +   +GE  G K     + G   +G LK E G HR+ R+ 
Sbjct: 129 GDMFRMYSRYAESRRWKVEIMSASEGEHGGYKEVIAKVSGEGVFGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR+         +  +G G    +
Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQ--LAEASERRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQ 342


>gi|206603661|gb|EDZ40141.1| Peptide chain release factor 1 [Leptospirillum sp. Group II '5-way
           CG']
          Length = 361

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 118/344 (34%), Positives = 186/344 (54%), Gaps = 8/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   ++ K  DP + +N      L R++  L   +S  +     +     L EL
Sbjct: 14  LESMRERYREISGKMADPEVSRNPAIYMKLARDQSELSIIVSLYENYLRIIDQQKDLQEL 73

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   ++ +    L     +VE +  +S+    E DS + +LE+ AGAGG E+  +A
Sbjct: 74  RQDPDFLDLVPQEEKKLSLELQDVESRLLDSILPRDERDSRNLFLEIRAGAGGEEAALFA 133

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+ E++ F+ E +E +D E  G +   + ++G  A+  LK E GVHR+ R+ 
Sbjct: 134 RELARMYLRFIERKGFRFEVMETNDTEIGGARETIIYVQGHGAFSQLKFESGVHRVQRVP 193

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ + P     ++++I   D RIDT+ AS AGGQ VNTT SAVRITH
Sbjct: 194 VTEAGGRIHTSTVTVAMIP-EASEVDVQIDPKDLRIDTFCASSAGGQSVNTTYSAVRITH 252

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PT +VV CQ ERSQ KNKA+A  +LRA+L E E  ++ E   I    K+++G G    +
Sbjct: 253 LPTNIVVSCQDERSQLKNKAKAMKVLRARLMEKEQTRQNE--QIASDRKSQVGTGDRSER 310

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R  +       V++G++D F+ A  A ++
Sbjct: 311 IRTYNF-PQNRVTDHRIGMTLYQLDQVMEGNIDPFVDALRAQER 353


>gi|297202390|ref|ZP_06919787.1| peptide chain release factor 1 [Streptomyces sviceus ATCC 29083]
 gi|197710089|gb|EDY54123.1| peptide chain release factor 1 [Streptomyces sviceus ATCC 29083]
          Length = 358

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 117/350 (33%), Positives = 174/350 (49%), Gaps = 16/350 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +  V   + L  K  DP +  +   A+ L +    L   ++  +  +    D   
Sbjct: 1   MFEAVEELVGEHADLEKKLADPSVHSDQANARKLNKRYAELTPIVATYRSWKQTGDDIET 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EL    DD     E  +  +      E  +   +    +D  D  LE+ AGAGG ES 
Sbjct: 61  AREL--GADDAEFAAEVKELEKARDELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG----------PNAYGWL 181
            +A  LLRMY R+AE+  +KTE ++  + E  G K   + +K              +  +
Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVAVKTKGGNGATEPGQGVWARM 178

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   +S  R HTS + + V P   + +++EI+ +D RID YR+SG GGQ
Sbjct: 179 KYEGGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEVDVEINPNDLRIDVYRSSGPGGQ 237

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITHIPTGVV  CQ E+SQ +NK QA  +LR++L     ++ E  A     
Sbjct: 238 SVNTTDSAVRITHIPTGVVASCQNEKSQLQNKEQALRILRSRLLAAAQEEAERNAADARR 297

Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           S+   +    +IR+Y   P   + D R   +  +   VLDGDLD  ++A 
Sbjct: 298 SQVRTVDRSEKIRTYNF-PENRISDHRVGFKSYNLDQVLDGDLDAVIQAC 346


>gi|313107327|ref|ZP_07793522.1| peptide chain release factor 1 [Pseudomonas aeruginosa 39016]
 gi|310880024|gb|EFQ38618.1| peptide chain release factor 1 [Pseudomonas aeruginosa 39016]
          Length = 360

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 116/342 (33%), Positives = 174/342 (50%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  I   ++ +    D      L
Sbjct: 9   LDVLSDRYEELTALLGDAEVISDQTRFRAYSREYAEVEPVILAFRDYRKVQADLEGAQAL 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +      R+    +  Q   L     DS + +LE+ AG GG E+  
Sbjct: 69  LKDSDPELRDLAEEEVAEARGRLAALGDSLQRMLLPKDPNDSRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AE++ ++ E L  ++GE  G K     ++G N Y  LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAERQGWRVETLSENEGEHGGYKEVIARVEGDNVYAKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSAVRI
Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQATIEINPADLRVDTYRSSGAGGQHVNKTDSAVRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIP+G+VV+CQ+ERSQHKN+A+A   L AKL + +         I  + K  +G G   
Sbjct: 249 THIPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQ--AAAQQAIASTRKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +IR+Y   P   V D R N+   S  +V++G ++  ++  L
Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYSLGEVMEGAVEQVIEPLL 347


>gi|163868347|ref|YP_001609556.1| peptide chain release factor 2 [Bartonella tribocorum CIP 105476]
 gi|161018003|emb|CAK01561.1| peptide chain release factor RF-2 [Bartonella tribocorum CIP
           105476]
          Length = 321

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 210/309 (67%), Positives = 256/309 (82%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRERQ LD++I+ +      L + + L+ +  EE D  I+ +  ++++ +K E++ +Q +
Sbjct: 1   MRERQRLDDSINGLLSFTKTLEECIELIAMGEEESDVEIIADAENSIRHLKSEIDKRQID 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGEADSND YLEVHAGAGGTESQDWA+MLLRMY RWAE+ + K E LEIHDGEEAGI
Sbjct: 61  VLLSGEADSNDTYLEVHAGAGGTESQDWASMLLRMYMRWAEQHEMKVEVLEIHDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+L+KG NAYG LK E GVHRLVRISP+DSN++RHTSF+SIWVYPV+DD+IE+++SE
Sbjct: 121 KSATILVKGHNAYGLLKTESGVHRLVRISPFDSNAKRHTSFASIWVYPVIDDNIEVDVSE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D RIDTYRASGAGGQHVNTTDSAVRITHI TG+VVQCQ ERSQHKN+A AW+MLRA+LY
Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+KREE  N  ESSKTEIGWG QIRSYVLQPYQ+VKDLRT IE T P  VL+G+LD 
Sbjct: 241 EEELKKREEETNAVESSKTEIGWGHQIRSYVLQPYQLVKDLRTGIENTDPQSVLNGNLDA 300

Query: 346 FMKATLAIK 354
           F++A L+ +
Sbjct: 301 FIEAALSQR 309


>gi|256380143|ref|YP_003103803.1| peptide chain release factor 1 [Actinosynnema mirum DSM 43827]
 gi|255924446|gb|ACU39957.1| peptide chain release factor 1 [Actinosynnema mirum DSM 43827]
          Length = 354

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 120/346 (34%), Positives = 179/346 (51%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +     L TK  DP +  +   A+ L +    L   +   +E++    D     EL
Sbjct: 5   LDALIAEHGELETKLADPSVHADQAGARKLGKRYAELTPIVRAARELEQTRNDLGAAREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D +  +E  +   RI    E      L     DS+D  +E+ +G GG ES  +A 
Sbjct: 65  --AGEDPAFAEEADELSARIPQLEERLTELLLPRDPHDSSDVVMEIKSGEGGEESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190
            LLRMY R+AE++ +K E L+  D +  G K  T+ IK         +  LK E GVHR+
Sbjct: 123 DLLRMYLRYAERQGWKAEVLDGTDSDLGGFKDVTVAIKSRGDGPDGVWSRLKYEGGVHRV 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + V P  +D   IEI + D R+D +R+SG GGQ VNTTDSAV
Sbjct: 183 QRVPVTESQGRIHTSAAGVLVIPETEDVASIEIDDKDLRVDVFRSSGKGGQSVNTTDSAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG+VV CQ ERSQ +NKA+A  +L+A+L  L  +K ++ A+    ++   +   
Sbjct: 243 RITHLPTGIVVSCQNERSQLQNKARAMQVLQARLQALAEEKAQQEASDARRTQVRTVDRS 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            ++R+Y   P   + D R   +  +   VLDG+LD  + A  A  +
Sbjct: 303 ERVRTYNF-PESRISDHRVGYKAHNLDAVLDGELDAVLDALSAADR 347


>gi|116052810|ref|YP_793127.1| peptide chain release factor 1 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218893762|ref|YP_002442631.1| peptide chain release factor 1 [Pseudomonas aeruginosa LESB58]
 gi|254244443|ref|ZP_04937765.1| peptide chain release factor 1 [Pseudomonas aeruginosa 2192]
 gi|296391486|ref|ZP_06880961.1| peptide chain release factor 1 [Pseudomonas aeruginosa PAb1]
 gi|122257179|sp|Q02G09|RF1_PSEAB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739119|sp|B7V0L1|RF1_PSEA8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|115588031|gb|ABJ14046.1| peptide chain release factor 1 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126197821|gb|EAZ61884.1| peptide chain release factor 1 [Pseudomonas aeruginosa 2192]
 gi|218773990|emb|CAW29805.1| peptide chain release factor 1 [Pseudomonas aeruginosa LESB58]
          Length = 360

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 116/342 (33%), Positives = 174/342 (50%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  I   ++ +    D      L
Sbjct: 9   LDVLSDRYEELTALLGDAEVISDQTRFRAYSREYAEVEPVILAFRDYRKVQADLEGAQAL 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +      R+    +  Q   L     DS + +LE+ AG GG E+  
Sbjct: 69  LKDSDPELRDLAEEEVAEARGRLAALGDSLQRMLLPKDPNDSRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AE++ ++ E L  ++GE  G K     ++G N Y  LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAERQGWRVETLSENEGEHGGYKEVIARVEGDNVYAKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSAVRI
Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQHVNKTDSAVRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIP+G+VV+CQ+ERSQHKN+A+A   L AKL + +         I  + K  +G G   
Sbjct: 249 THIPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQ--AAAQQAIASTRKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +IR+Y   P   V D R N+   S  +V++G ++  ++  L
Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYSLGEVMEGAVEQVIEPLL 347


>gi|193211744|ref|YP_001997697.1| peptide chain release factor 1 [Chlorobaculum parvum NCIB 8327]
 gi|238692678|sp|B3QRH7|RF1_CHLP8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|193085221|gb|ACF10497.1| peptide chain release factor 1 [Chlorobaculum parvum NCIB 8327]
          Length = 357

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 100/352 (28%), Positives = 182/352 (51%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   +   +   +  +  DP +  +    + L +E   L   +      +        
Sbjct: 1   MFDKLQSIKDKYLTIEQQLSDPEVAADQNRFRKLNKEYSGLREIVRAYDNWRSAKQQLDE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            L +   E+D  +    +   + ++  +   +       L   EAD+ +A +E+ AG GG
Sbjct: 61  TLAMQKSEEDPEMRALAAAEAEELQERLPELEQNLKILLLPKDEADTRNAIIEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGPNAYGWLKGEQG 186
            E+  +A  L+RMY R+AE++ +  + L++ +G   G  K  +L + G + YG LK E G
Sbjct: 121 DEAGLFAADLMRMYQRYAERQGWSCQTLDVSEGSVPGSLKEVSLEVSGHDVYGILKFESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +S+ V P   + +++EI + D ++DT+R+ G GGQ+VN  
Sbjct: 181 VHRVQRVPETETQGRIHTSAASVAVLP-EAEEVDVEIRKDDLQMDTFRSGGKGGQNVNKV 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++AVRITH+P+G+VV CQ+ERSQ +N+ +A  MLR+KLY++++ ++ +        ++ +
Sbjct: 240 ETAVRITHVPSGIVVACQEERSQLQNRERAMKMLRSKLYDIKITEQLQSRADL--RRSMV 297

Query: 307 GWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             G +   IR+Y   P   V D R      +   V+ G+L+  + A     +
Sbjct: 298 ATGDRSAKIRTYNF-PQSRVTDHRIGFTTHALPQVMQGELEPIIDALRMHDQ 348


>gi|218689158|ref|YP_002397370.1| peptide chain release factor 1 [Escherichia coli ED1a]
 gi|254790882|sp|B7MTZ5|RF1_ECO81 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|218426722|emb|CAR07559.1| peptide chain release factor RF-1 [Escherichia coli ED1a]
          Length = 360

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 114/344 (33%), Positives = 179/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+      ++ +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            R+Y   P   V D R N+      +V++G LD  ++  +   +
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYCLDEVMEGKLDMLIEPIIQEHQ 349


>gi|326571210|gb|EGE21234.1| peptide chain release factor 1 [Moraxella catarrhalis BC7]
          Length = 359

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 171/341 (50%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   +     DP    +  + + L  E   L    +  ++      D     EL
Sbjct: 9   LDQMVDRFEEVTVLLSDPDTISDNKKFRELSMEHSDLSEITTTWQDFVQAEADLQTANEL 68

Query: 76  ALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   +   E       I+   E      L     D   A+LE+ AG GG E+  ++
Sbjct: 69  LSDPEMKEMALDEIEVARANIETLEERLNVMMLPKDPNDKATAFLEIRAGTGGDEAAIFS 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY ++ + + ++ E L  ++GE  G K     + G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYQKYTQSQGWQVEVLSANEGEHGGYKEIIARVSGIGVYGRLKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P V+    +EI+ SD RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 ATESQGRVHTSACTVAVMPEVEIDDTVEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTGVV +CQQERSQH NK +A  ML A++ + ++Q   +I    +  +  +G G    +
Sbjct: 249 IPTGVVAECQQERSQHANKEKAMKMLVARIQQAKVQ--AQIDATSDMRRNLVGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       +++GDL + + + L 
Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSLLR 346


>gi|330815385|ref|YP_004359090.1| Peptide chain release factor 1 [Burkholderia gladioli BSR3]
 gi|327367778|gb|AEA59134.1| Peptide chain release factor 1 [Burkholderia gladioli BSR3]
          Length = 360

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 178/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL+ LN      ++  ++ + + L RE   +   +    + +    D     EL
Sbjct: 9   LDQLSNRLAELNELLSRENVTADLDQYRKLTREHAEIGPVVEHYAQWRLARGDEATAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +       +E     +          Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 69  LSDAAMREFAEEEIREARERMARLEAELQKMLLPRDPNDERNIFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE+++++ E +     +  G K   + I G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYLRYAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+  E+EI+ +D RIDT+RASGAGGQH+N TDSAVR+TH
Sbjct: 189 ATETQGRIHTSACTVAVMPEADEIAEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ +RSQHKNK +A  +L A++ +   Q  E+ A    + K+ IG G    +
Sbjct: 249 LPTGIVVECQDDRSQHKNKERALKVLAARIKDK--QYHEQHAKEAATRKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++DGDLD+ +   ++  +
Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYKLEALMDGDLDEMIATLVSEHQ 349


>gi|299537972|ref|ZP_07051258.1| peptide chain release factor 1 [Lysinibacillus fusiformis ZC1]
 gi|298726554|gb|EFI67143.1| peptide chain release factor 1 [Lysinibacillus fusiformis ZC1]
          Length = 358

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 104/351 (29%), Positives = 174/351 (49%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD       R   L     DP +  +  + +   +E+  +   +   +E +      + 
Sbjct: 1   MFDRLQAVEDRYERLTELLSDPDIVNDSKKLREYSKEQSDIQETVDTYREYKSVKEQLVD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             E+   E D  + +   +    +K + E  +       +     D+ +  +E+   AGG
Sbjct: 61  TREMLDSEKDPDMHEMVKEEFNLLKAQQEELEERLRILLIPKDPNDNKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +K + +E       G K    +I G  AY   K E G 
Sbjct: 121 DEANIFAGDLFRMYSRYAETQGWKIDIMEATPNPMGGYKEVIFMINGQGAYSKFKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P   + +++EI E D R+DT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRVPATESQGRIHTSTATVACLP-EVEEVDVEIHEKDIRVDTFASSGAGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV  Q ERSQ KN+ +A  +LRA++ ++ +Q  E    I  + K+ +G
Sbjct: 240 SAVRMTHLPTGVVVSMQDERSQIKNREKAMKILRARVADMYMQ--EAQKEIDATRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G LD+ + A +  ++
Sbjct: 298 SGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIVEGRLDEIIDALILEEQ 347


>gi|15599860|ref|NP_253354.1| peptide chain release factor 1 [Pseudomonas aeruginosa PAO1]
 gi|107099668|ref|ZP_01363586.1| hypothetical protein PaerPA_01000686 [Pseudomonas aeruginosa PACS2]
 gi|12231016|sp|P42806|RF1_PSEAE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|9950920|gb|AAG08052.1|AE004880_8 peptide chain release factor 1 [Pseudomonas aeruginosa PAO1]
          Length = 360

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 116/342 (33%), Positives = 174/342 (50%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  I   ++ +    D      L
Sbjct: 9   LDVLSDRYEELTALLGDAEVISDQTRFRAYSREYAEVEPVILAFRDYRKVQADLEGAQAL 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +      R+    +  Q   L     DS + +LE+ AG GG E+  
Sbjct: 69  LKDSDPELRDLAEEEVAEARGRLAALGDSLQRMLLPKDPNDSRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AE++ ++ E L  ++GE  G K     ++G N Y  LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAERQGWRIETLSENEGEHGGYKEVIARVEGDNVYAKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSAVRI
Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQHVNKTDSAVRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIP+G+VV+CQ+ERSQHKN+A+A   L AKL + +         I  + K  +G G   
Sbjct: 249 THIPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQ--AAAQQAIASTRKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +IR+Y   P   V D R N+   S  +V++G ++  ++  L
Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYSLGEVMEGAVEQVIEPLL 347


>gi|37525987|ref|NP_929331.1| peptide chain release factor 1 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|46576710|sp|Q7N586|RF1_PHOLL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|36785417|emb|CAE14363.1| Peptide chain release factor 1 (RF-1) [Photorhabdus luminescens
           subsp. laumondii TTO1]
          Length = 360

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 121/337 (35%), Positives = 177/337 (52%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +  +  K       D      +
Sbjct: 9   LEALQERHEEVLAHLGDADVIADQERFRALSREYAQLTDVTNCFKAWSAVQDDLKAAEIM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE   +   R +   +  Q   L     D  + +LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQEEIRDAKVRNEELEQQLQLLLLPKDPDDERNCFLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R++K E +  +DGE  G K     + G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESRRWKVEVISANDGEHGGYKEIIAKVSGEQVYGHLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + D+   EIS SD RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVLPEIPDAELPEISPSDLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ ERSQHKNKA+A ++L A++   E++KR+E        +  +G G    +
Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLAARIRAAEVRKRQE--AEASERRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVIEGKLDMLVQ 342


>gi|329889563|ref|ZP_08267906.1| peptide chain release factor 2 [Brevundimonas diminuta ATCC 11568]
 gi|328844864|gb|EGF94428.1| peptide chain release factor 2 [Brevundimonas diminuta ATCC 11568]
          Length = 300

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 182/293 (62%), Positives = 222/293 (75%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D ++L ++A EE D + L++  + L+ IK      + E+LLSGEAD NDAYLE+
Sbjct: 1   MEQGLEDGIMLADMADEEGDEATLEDAREQLKAIKERAARAELEALLSGEADGNDAYLEI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
           ++GAGGTES DWA ML+RMY+RWA    ++        GE+AGIKSATL I GPNAYGWL
Sbjct: 61  NSGAGGTESNDWAGMLMRMYSRWARAHGYEVTIEAEEQGEQAGIKSATLQIAGPNAYGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVRISPYD+ ++RHTSF+SI V PVVDD+IEI+I+ +D R DTYRASGAGGQ
Sbjct: 121 KSESGVHRLVRISPYDAAAKRHTSFASIGVSPVVDDTIEIDINPADVRTDTYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N TDSAVR+TH+PT  VV CQ  RSQH+N+ QAW MLRA+LYELELQKRE  A     
Sbjct: 181 HINKTDSAVRLTHVPTNTVVACQAGRSQHQNREQAWKMLRARLYELELQKREAAAQALAD 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +KT+IGWG QIRSYVLQPYQMVKDLRT +E +    VLDGDLD FM A LA +
Sbjct: 241 AKTDIGWGHQIRSYVLQPYQMVKDLRTEVETSDTQGVLDGDLDPFMGAALAAR 293


>gi|22126175|ref|NP_669598.1| peptide chain release factor 1 [Yersinia pestis KIM 10]
 gi|45441669|ref|NP_993208.1| peptide chain release factor 1 [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108807397|ref|YP_651313.1| peptide chain release factor 1 [Yersinia pestis Antiqua]
 gi|108811662|ref|YP_647429.1| peptide chain release factor 1 [Yersinia pestis Nepal516]
 gi|145598396|ref|YP_001162472.1| peptide chain release factor 1 [Yersinia pestis Pestoides F]
 gi|149366051|ref|ZP_01888086.1| peptide chain release factor 1 [Yersinia pestis CA88-4125]
 gi|153947351|ref|YP_001401039.1| peptide chain release factor 1 [Yersinia pseudotuberculosis IP
           31758]
 gi|162421626|ref|YP_001606878.1| peptide chain release factor 1 [Yersinia pestis Angola]
 gi|165926418|ref|ZP_02222250.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165938830|ref|ZP_02227384.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166009117|ref|ZP_02230015.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166210440|ref|ZP_02236475.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167401373|ref|ZP_02306870.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167420420|ref|ZP_02312173.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167424382|ref|ZP_02316135.1| peptide chain release factor 1 [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|170024410|ref|YP_001720915.1| peptide chain release factor 1 [Yersinia pseudotuberculosis YPIII]
 gi|186895374|ref|YP_001872486.1| peptide chain release factor 1 [Yersinia pseudotuberculosis PB1/+]
 gi|218929128|ref|YP_002347003.1| peptide chain release factor 1 [Yersinia pestis CO92]
 gi|229894728|ref|ZP_04509908.1| peptide chain release factor RF-1 [Yersinia pestis Pestoides A]
 gi|229897428|ref|ZP_04512584.1| peptide chain release factor RF-1 [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229898071|ref|ZP_04513222.1| peptide chain release factor RF-1 [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229901940|ref|ZP_04517061.1| peptide chain release factor RF-1 [Yersinia pestis Nepal516]
 gi|270490877|ref|ZP_06207951.1| peptide chain release factor 1 [Yersinia pestis KIM D27]
 gi|294503912|ref|YP_003567974.1| peptide chain release factor 1 [Yersinia pestis Z176003]
 gi|20139332|sp|Q8ZEX8|RF1_YERPE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361639|sp|Q1C854|RF1_YERPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361640|sp|Q1CJK1|RF1_YERPN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223619|sp|A4TJN7|RF1_YERPP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166977371|sp|A7FIG1|RF1_YERP3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238687250|sp|A9QZ08|RF1_YERPG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238688460|sp|B1JM85|RF1_YERPY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238691366|sp|B2K2Z0|RF1_YERPB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|21959139|gb|AAM85849.1|AE013831_12 peptide chain release factor RF-1 [Yersinia pestis KIM 10]
 gi|45436531|gb|AAS62085.1| peptide chain release factor 1 [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108775310|gb|ABG17829.1| bacterial peptide chain release factor 1 (bRF-1) [Yersinia pestis
           Nepal516]
 gi|108779310|gb|ABG13368.1| bacterial peptide chain release factor 1 (bRF-1) [Yersinia pestis
           Antiqua]
 gi|115347739|emb|CAL20654.1| peptide chain release factor 1 [Yersinia pestis CO92]
 gi|145210092|gb|ABP39499.1| bacterial peptide chain release factor 1 (bRF-1) [Yersinia pestis
           Pestoides F]
 gi|149292464|gb|EDM42538.1| peptide chain release factor 1 [Yersinia pestis CA88-4125]
 gi|152958846|gb|ABS46307.1| peptide chain release factor 1 [Yersinia pseudotuberculosis IP
           31758]
 gi|162354441|gb|ABX88389.1| peptide chain release factor 1 [Yersinia pestis Angola]
 gi|165913193|gb|EDR31816.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165921639|gb|EDR38836.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165991672|gb|EDR43973.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166207620|gb|EDR52100.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962115|gb|EDR58136.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167049069|gb|EDR60477.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167056264|gb|EDR66033.1| peptide chain release factor 1 [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|169750944|gb|ACA68462.1| peptide chain release factor 1 [Yersinia pseudotuberculosis YPIII]
 gi|186698400|gb|ACC89029.1| peptide chain release factor 1 [Yersinia pseudotuberculosis PB1/+]
 gi|229680836|gb|EEO76931.1| peptide chain release factor RF-1 [Yersinia pestis Nepal516]
 gi|229689112|gb|EEO81177.1| peptide chain release factor RF-1 [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229693765|gb|EEO83814.1| peptide chain release factor RF-1 [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229702201|gb|EEO90220.1| peptide chain release factor RF-1 [Yersinia pestis Pestoides A]
 gi|262361967|gb|ACY58688.1| peptide chain release factor 1 [Yersinia pestis D106004]
 gi|262365894|gb|ACY62451.1| peptide chain release factor 1 [Yersinia pestis D182038]
 gi|270339381|gb|EFA50158.1| peptide chain release factor 1 [Yersinia pestis KIM D27]
 gi|294354371|gb|ADE64712.1| peptide chain release factor 1 [Yersinia pestis Z176003]
 gi|320015305|gb|ADV98876.1| peptide chain release factor RF-1 [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 360

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 116/337 (34%), Positives = 174/337 (51%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     KE +    D      +
Sbjct: 9   LEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSAQDDIEAAEMM 68

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   +  +E      R +   +  Q   L     D  D +LE+ AG GG E+  +A
Sbjct: 69  LDDLEMREMAQEELKIAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             + RMY+R+AE R++K E +   +GE  G K     I G   +G LK E G HR+ R+ 
Sbjct: 129 GDMFRMYSRYAETRRWKVEIMSASEGEHGGYKEIIAKISGDGVFGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVMPAIPEAELPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR+         +  +G G    +
Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQ--LAEASERRNLLGTGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIQ 342


>gi|302024124|ref|ZP_07249335.1| peptide chain release factor 2 [Streptococcus suis 05HAS68]
          Length = 253

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 133/247 (53%), Positives = 171/247 (69%)

Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167
           LS   D N+A LE+H G+GGTE+QDW  MLLRMY R+   + F  E L+   G+EAGIKS
Sbjct: 5   LSDPYDHNNAILEIHPGSGGTEAQDWGEMLLRMYQRYGNAKGFIVETLDYQAGDEAGIKS 64

Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
            TL   GPNAYG LK E GVHRLVRISP+DS  RRHTSF+S+ V P +DD+IEIEI + +
Sbjct: 65  VTLSFTGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVMPELDDTIEIEIRDDE 124

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            ++DT+R+ GAGGQ+VN   + VR+THIPTG+V Q   +R+Q+ N+ +A  +L+AKLY+L
Sbjct: 125 VKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRTQYGNRDRAMKLLQAKLYQL 184

Query: 288 ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           E +K+    +  +  K EI WG QIRSYV  PY MVKD RT  E      V+DGDLD F+
Sbjct: 185 EQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYTMVKDHRTGYEVAQVDKVMDGDLDGFI 244

Query: 348 KATLAIK 354
            A L  +
Sbjct: 245 DAYLKWR 251


>gi|198284467|ref|YP_002220788.1| peptide chain release factor 1 [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218665453|ref|YP_002427134.1| peptide chain release factor 1 [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|198248988|gb|ACH84581.1| peptide chain release factor 1 [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218517666|gb|ACK78252.1| peptide chain release factor 1 [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 365

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 125/362 (34%), Positives = 186/362 (51%), Gaps = 15/362 (4%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           M LS +L         +    R   L+     P    +    + L +E   +   +  ++
Sbjct: 1   MSLSPRLQS-----QLEQLAFRFDELSQLLASPGAAGDTQRFQSLSKELGEIGPVLELLR 55

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSND 116
             Q R  D      + LEE D  +    S+ +   + E++  +       L     D   
Sbjct: 56  RHQQRQRDRDEGGRMLLEEQDAELRALASEEVAAAEAELDQIEAALRIRLLPKDPNDDRS 115

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
            +LE+ AG GG E+  +A +L RMYTR+AE + F    L   D E  G K   L I G  
Sbjct: 116 VFLEIRAGTGGEEAALFAGVLARMYTRYAESKGFGVVILSASDSERGGYKEVVLEISGRG 175

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           AY  LK E G HR+ R+   ++  R HTS  ++ V P VD   EI I+ +D RIDTYRAS
Sbjct: 176 AYSCLKFESGGHRVQRVPETETQGRIHTSACTVAVLPEVDTVSEITINPADLRIDTYRAS 235

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQH+N TDSA+RITH+P+G+VV CQ++RSQHKN+A+A  +L+A+L E E +K++  A
Sbjct: 236 GAGGQHINKTDSAIRITHVPSGMVVTCQEDRSQHKNRARAMALLQARLLEQEQEKQQSAA 295

Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
              ++ +  +G G    +IR+Y   P   + D R N+       VL+GDLD  ++  +  
Sbjct: 296 --AQTRRLLVGSGDRSERIRTYNF-PQGRITDHRINLTLYRLEAVLEGDLDAVIEPLIKE 352

Query: 354 KK 355
            +
Sbjct: 353 YQ 354


>gi|255348385|ref|ZP_05380392.1| peptide chain release factor 1 [Chlamydia trachomatis 70]
 gi|255502926|ref|ZP_05381316.1| peptide chain release factor 1 [Chlamydia trachomatis 70s]
 gi|255506595|ref|ZP_05382234.1| peptide chain release factor 1 [Chlamydia trachomatis D(s)2923]
 gi|289525068|emb|CBJ14538.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis
           Sweden2]
 gi|296434608|gb|ADH16786.1| peptide chain release factor 1 [Chlamydia trachomatis E/150]
 gi|296438326|gb|ADH20479.1| peptide chain release factor 1 [Chlamydia trachomatis E/11023]
          Length = 359

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 111/338 (32%), Positives = 178/338 (52%), Gaps = 11/338 (3%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLELAL 77
           +RL  +  +  DP+++ N  E   L +E   L    +  + +   +  L D+ + L    
Sbjct: 10  KRLEEVEKQISDPNIFSNPKEYSSLSKEHARLSEIKNAHESLVATKKILQDDKLALSTEK 69

Query: 78  EEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           + +  ++L+E     +     +  + +   +     D     +E+ AG GG E+  +   
Sbjct: 70  DPEIVAMLEEGVLVGEEAVEHLSKQLENLLIPPDPDDDLSVIMELRAGTGGDEAALFVGD 129

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
            +RMY  +A  + ++ E L   + +  G K   + I G +   +L+ E G HR+ R+   
Sbjct: 130 CVRMYHLYAASKGWQCEVLSASESDLGGYKEYVMGISGASVKRFLQYEAGTHRVQRVPET 189

Query: 197 DSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           ++  R HTS  ++ V P   +D  E+ I E D RIDT+R+SGAGGQHVN TDSAVRITHI
Sbjct: 190 ETQGRVHTSAVTVAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSAVRITHI 249

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           P+GVVV CQ ERSQHKNKA+A  +L+A++ + E+QKR + A+   S   ++G G    +I
Sbjct: 250 PSGVVVTCQDERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRS--AQVGSGDRSERI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           R+Y   P   V D R  +   +   V++G+LD    A 
Sbjct: 308 RTYNF-PQNRVTDHRIGLTLYNLDRVMEGELDMITTAL 344


>gi|259908618|ref|YP_002648974.1| peptide chain release factor 1 [Erwinia pyrifoliae Ep1/96]
 gi|224964240|emb|CAX55747.1| Peptide chain release factor 1 (RF-1) [Erwinia pyrifoliae Ep1/96]
          Length = 360

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 111/337 (32%), Positives = 174/337 (51%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     ++ Q    D      +
Sbjct: 9   LEALQERHEEVEALLGDAGVIADQERFRALSREYAQLTDVSRCFRQWQQCQEDMATAEMM 68

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   +  +E            +  Q   L     D  + YLEV AG GG E+  +A
Sbjct: 69  LGDAEMREMAQEELQAARAASDELQQQLQVLLLPKDPDDERNCYLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R++K E +  ++GE  G K     + G  AYG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEYRRWKVEVMSANEGEHGGYKEVIAKVIGEGAYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +I+ SD +IDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A  +L +++   E+ +R++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARRQQE--ESSTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      + ++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTIYRLDEAMEGKLDALIE 342


>gi|154500225|ref|ZP_02038263.1| hypothetical protein BACCAP_03889 [Bacteroides capillosus ATCC
           29799]
 gi|150270957|gb|EDM98231.1| hypothetical protein BACCAP_03889 [Bacteroides capillosus ATCC
           29799]
          Length = 355

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 105/348 (30%), Positives = 178/348 (51%), Gaps = 9/348 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D   +       L  +   P  + +      L +E+  L+  +   +    R  D   
Sbjct: 1   MLDKLRSLELHYEDLVARLNAPETYGDPALVAKLNKEQSELEPLVETYRRYIRRQQDMEE 60

Query: 72  LLELALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
              L  + D      +E +   +  +   +  +   L +   D  +  +E+ AG GG E+
Sbjct: 61  ARSLMSDPDMKELAQEEFAQAKEEAEELEQKMKILLLPTDPNDGKNVIVEIRAGVGGEEA 120

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +AN L RMY+ +AE R +K E   +++ E  GIK  +  ++G  AY  LK E GVHR+
Sbjct: 121 ALFANSLYRMYSMYAETRHWKVEVASLNETELGGIKEISFTVEGGGAYSRLKFESGVHRV 180

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ V P   + ++++I+ +D  +  +R+SGAGGQH+N T SAV
Sbjct: 181 QRVPETESGDRIHTSTVTVAVLP-EAEEVDVDINPADIEMQVFRSSGAGGQHINKTSSAV 239

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+ H PTG+VV+CQQERSQ +N+ +A  +LR++LYE E Q+        E  ++++G G 
Sbjct: 240 RLIHKPTGMVVECQQERSQFQNRDKAMQILRSRLYEAEQQRVSAE--WSEERRSQVGTGM 297

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   + D R  +      DV++GDLD+ + + +   +
Sbjct: 298 RNERIRTYNF-PQGRLTDHRIGLTLYKLEDVMNGDLDEIIDSLITADQ 344


>gi|206901386|ref|YP_002250520.1| peptide chain release factor 1 [Dictyoglomus thermophilum H-6-12]
 gi|226739102|sp|B5YDB2|RF1_DICT6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|206740489|gb|ACI19547.1| peptide chain release factor 1 [Dictyoglomus thermophilum H-6-12]
          Length = 367

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 114/347 (32%), Positives = 185/347 (53%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +        +  ++   + L++ER  ++  +    E +  L +   L  +
Sbjct: 10  LEEIEKRFKEIENLLTKEEIISDLSRYQSLLKERAKIEEIVEKFSEYKKLLKEREDLEVM 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQF----ESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  +       L+ I+ ++E  +F      L     D  +  +E+ AG GG E+ 
Sbjct: 70  TKEEQDEDLRSLAEAELEEIEKKLEKIEFDLKALLLPKDPNDEKNIIMEIRAGTGGEEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY  +A+K+ +K E +  +     G K    +++G  AY  LK E GVHR+ 
Sbjct: 130 LFAADLFRMYVGYAQKKGWKVEIVSSNPTGLGGYKEIIFIVEGKGAYSRLKFESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P   + +++EI   D RI+T+R+ GAGGQHVN T+S VR
Sbjct: 190 RVPITESSGRIHTSTATVAVLP-EMEEVDVEIDPKDLRIETFRSGGAGGQHVNKTESGVR 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIP+G+VVQCQ ERSQH+N+ +A  +LRA+LYE    +RE+   I    + ++G G +
Sbjct: 249 ITHIPSGIVVQCQDERSQHQNREKAMKVLRARLYEYY--QREKENEIASQRRQQVGTGER 306

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              IR+Y   P + V D R N       +VL G+LD+F+   +  +K
Sbjct: 307 SEKIRTYNF-PQRRVTDHRINYSSFQLEEVLSGELDEFIDRLILAEK 352


>gi|238899147|ref|YP_002924829.1| peptide chain release factor RF-1 [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
 gi|259585226|sp|C4K7Y8|RF1_HAMD5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229466907|gb|ACQ68681.1| peptide chain release factor RF-1 [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
          Length = 360

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 121/344 (35%), Positives = 175/344 (50%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L     DP   Q+    +M+ RE   L N      E      D +    L
Sbjct: 9   LEALQERHEELQAHLADPLTIQDQERFRMMSREYAQLSNIAELFTEWLKLQNDMIAAKSL 68

Query: 76  ALEEDDCSILQET-SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   +  E       + +   +  Q   L     DS   +LE+ AG GG E+  +A
Sbjct: 69  LQDPEMHEMATEELEKAKIQSEQLTQQLQILLLPKDIDDSRSCFLEIRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+AE R +K E +  H+GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYARYAESRSWKMEIISAHEGEHGGYKEMITKISGEGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +    +I+ SD RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 TTESQGRIHTSACTVAVMPEIPEEELPKITLSDLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI-- 312
           +PTG+VV+CQ ERSQHKNKA+A ++L A+++  ++QKR++        +  +G G +   
Sbjct: 249 LPTGIVVECQDERSQHKNKAKAMSVLGARMHAAQVQKRQQAQ--ASERRNLLGSGDRSDR 306

Query: 313 -RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            R+Y   P   V D R N+      +V+ G LD  +   L   +
Sbjct: 307 HRTYNF-PQGRVTDHRINLTLYRLDEVMSGKLDILIHPLLREHQ 349


>gi|82544335|ref|YP_408282.1| peptide chain release factor 1 [Shigella boydii Sb227]
 gi|187734065|ref|YP_001879994.1| peptide chain release factor 1 [Shigella boydii CDC 3083-94]
 gi|119361607|sp|Q31ZQ4|RF1_SHIBS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238691757|sp|B2TZV9|RF1_SHIB3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|81245746|gb|ABB66454.1| peptide chain release factor RF-1 [Shigella boydii Sb227]
 gi|187431057|gb|ACD10331.1| peptide chain release factor 1 [Shigella boydii CDC 3083-94]
 gi|320185614|gb|EFW60376.1| Peptide chain release factor 1 [Shigella flexneri CDC 796-83]
 gi|332094801|gb|EGI99845.1| peptide chain release factor 1 [Shigella boydii 3594-74]
          Length = 360

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 114/344 (33%), Positives = 179/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+      ++ +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQDELRKAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            R+Y   P   V D R N+      +V++G LD  ++  +   +
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 349


>gi|307111728|gb|EFN59962.1| hypothetical protein CHLNCDRAFT_133064 [Chlorella variabilis]
          Length = 426

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 133/357 (37%), Positives = 209/357 (58%), Gaps = 4/357 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  ++     + D  +  +R++ L        LW+    A  ++++   L   ++ ++ 
Sbjct: 51  ELQERIQDAVKVADLPSLKRRMAELEEAAGASDLWEQRARATAVLQQLTALREEVAALER 110

Query: 62  IQDRLCDN---LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
              +L D    + LLE+  E    ++  E       +   +E  +   LL G  D   A 
Sbjct: 111 FCGQLEDLGVAMELLEMEDEAGAQAMAAEAGSICDGLAAGLEAWELRRLLGGPYDDRGAV 170

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           L + AGAGGT++QDWA ML RMY RWAEK+  +T  ++   GEEAGIKS  + + G  AY
Sbjct: 171 LTIQAGAGGTDAQDWAEMLERMYLRWAEKQGHRTRVVDRQQGEEAGIKSVEIEVDGRYAY 230

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-SIEIEISESDCRIDTYRASG 237
           G+L GE+G HRLVR SP+++ + R TSF+++ V P++ +   E+E+ ESD  I T R++G
Sbjct: 231 GYLHGEKGTHRLVRQSPFNAKAARQTSFAAVEVMPMLGELVDEVELPESDLEITTMRSAG 290

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           AGGQ+VN  ++AVRI H+PTG+ V+CQ ERSQ +NK+ A  ML+AKL  +  +++ +   
Sbjct: 291 AGGQNVNKVETAVRIKHLPTGIAVKCQMERSQAQNKSIALGMLKAKLLVVAQEQQLQEVA 350

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                  +  WG+QIR+YV  PY++VKD+RT  E +  + V+DG+L  FM+A L  +
Sbjct: 351 EIRGDLVKAEWGQQIRNYVFHPYKLVKDVRTGQETSDVAGVMDGELQPFMQAYLQHR 407


>gi|317130773|ref|YP_004097055.1| peptide chain release factor 1 [Bacillus cellulosilyticus DSM 2522]
 gi|315475721|gb|ADU32324.1| peptide chain release factor 1 [Bacillus cellulosilyticus DSM 2522]
          Length = 357

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 107/352 (30%), Positives = 184/352 (52%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68
           +FD  +   +R   LN    DP +  +  + +   +E+  ++  +   +E +    +  D
Sbjct: 1   MFDRLEAVEERYERLNELLMDPDVISDTKKLRDYSKEQSDIEETVQTFREYKEIKKQYTD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF--ESLLSGEADSNDAYLEVHAGAG 126
              +L+    +D+   + +   +    ++    ++     L     D  +  +E+   AG
Sbjct: 61  AKTMLKEEDLDDEMYEMVKMEMDELEDQIPPLEEKLRVLLLPKDPNDDKNVIVEIRGAAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMY+R+AE + ++ E +E  + +  G K    +I G  AY  +K E G
Sbjct: 121 GDEAALFAGDLYRMYSRYAEAQGWRPEVIEASENDIGGYKEIIFMINGKGAYSKMKYENG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P   + +E++I+E D R+DT+ +SG GGQ VNTT
Sbjct: 181 AHRVQRVPTTESGGRIHTSTATVAVLP-EAEEVEVDINEKDIRVDTFASSGPGGQSVNTT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+THIPTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K+ +
Sbjct: 240 MSAVRLTHIPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKF--RKEAEAEYAQNRKSAV 297

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       +L+G LD+   A +  ++
Sbjct: 298 GTGDRSERIRTYNF-PQSRVTDHRIGLTLQKLDQILEGKLDEITDALIVEEQ 348


>gi|89095600|ref|ZP_01168494.1| peptide chain release factor 1 [Bacillus sp. NRRL B-14911]
 gi|89089346|gb|EAR68453.1| peptide chain release factor 1 [Bacillus sp. NRRL B-14911]
          Length = 357

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 107/347 (30%), Positives = 176/347 (50%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
                 R   LN    DP +  +  + +   +E+  +   +   +E ++   +  D   +
Sbjct: 5   LQAVEDRYERLNELLSDPEIVNDTKKLREYSKEQSGIQETVEAYREYKEVRGQYQDAKAM 64

Query: 73  LELALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LE  L+ +   +++E       R++      +   +     D  +  +E+   AGG E+ 
Sbjct: 65  LEEKLDAEMREMVKEEIGELEDRVEALEARLKILLIPKDPNDDKNVIMEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE + +KT+ +E       G K    +I G  A+  LK E G HR+ 
Sbjct: 125 LFAGDLYRMYSRFAEVQGWKTDVIEASSTGVGGYKEIIFIINGNGAFSKLKFENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EIEI + D R+DT+ +SG GGQ VNTT SAVR
Sbjct: 185 RVPETESGGRIHTSTATVAVLP-EAEEVEIEIHDKDIRVDTFASSGPGGQSVNTTMSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG VV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   +  K+ +G G  
Sbjct: 244 LTHLPTGTVVSCQDEKSQIKNKEKAMKVLRARVYDKF--QQEAQAEYDQQRKSAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +L G LD+ + A +  ++
Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDEVIDALIMEEQ 347


>gi|329897171|ref|ZP_08271911.1| Peptide chain release factor 1 [gamma proteobacterium IMCC3088]
 gi|328921326|gb|EGG28720.1| Peptide chain release factor 1 [gamma proteobacterium IMCC3088]
          Length = 361

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 113/341 (33%), Positives = 174/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   ++    D     N    + L RE   L+  ++  K  Q    D      +
Sbjct: 9   LELLVERHEEVSALLSDAETISNQERFRELSREYSELEEVVATFKRYQTAKDDMEAAQLM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV---EYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            L++D         +     +         Q   L     DS + +LE+ AG GG E+  
Sbjct: 69  LLDDDPDMREMAEEELDAAKEAIEALEIELQRLLLPKDPKDSANVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AE+ K++ E L    GE  G K     ++G + Y  LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAERMKWRLEVLSERAGEHGGYKEIITRVEGRDVYAHLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V     +   IEI+++D R+DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVAVMAEAAEVDAIEINKADIRVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ ERSQHKN+A+A ++L+AKL     +K    +   +  +  +G G   
Sbjct: 249 THLPTGIVVECQDERSQHKNRARAMSLLQAKLDTAAEEK--AASEQAQERRNLVGTGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            +IR+Y   P   + D R N+      ++++GDLD  +   
Sbjct: 307 DRIRTYNF-PQGRMTDHRINLTLYKLDEIMEGDLDSVVTPL 346


>gi|330686486|gb|EGG98080.1| putative peptide chain release factor 2 [Staphylococcus epidermidis
           VCU121]
          Length = 271

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 148/267 (55%), Positives = 192/267 (71%), Gaps = 1/267 (0%)

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            +N+   K E+++ + + LL G  D+N+A LE+H GAGGTESQDW +MLLRMY R+ E+ 
Sbjct: 2   ENNVIEFKSEIDHFELQLLLDGPYDANNAILELHPGAGGTESQDWVSMLLRMYQRYCEQS 61

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E ++   G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF+S
Sbjct: 62  GFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 121

Query: 209 IWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
             V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+SA+RITH PTG+VV  Q ER
Sbjct: 122 CDVIPDFDNDEIEIEINSDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 181

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ KN+  A  ML++KLY+L+L+++E         + EIGWG QIRSYV  PY MVKD R
Sbjct: 182 SQIKNREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 241

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354
           TN E      V+DGD+  F++A L  +
Sbjct: 242 TNEETGKVDAVMDGDIGPFIEAYLRHQ 268


>gi|152977515|ref|YP_001377032.1| peptide chain release factor 1 [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|189039958|sp|A7GV79|RF1_BACCN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|152026267|gb|ABS24037.1| peptide chain release factor 1 [Bacillus cytotoxicus NVH 391-98]
          Length = 355

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 111/351 (31%), Positives = 174/351 (49%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D       R   LN    DP +  +  + +   +E+  +   +   +E +D       
Sbjct: 1   MLDRLQAVEDRYEKLNELLSDPAVINDSNKLREYSKEQSDIQETVEVYREYKDVREQLQD 60

Query: 72  LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +  ++ D  + +   +       + K   +  +   +     D  +  +E+   AGG
Sbjct: 61  AKAMLEDKLDAEMREMVKEEVSDLEVQEKELSDRLKILLVPKDPNDDKNVIVEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KT+ +E    E  G K    +I G  AY  LK E G 
Sbjct: 121 DEAALFAGDLYRMYSRYAEMQGWKTDIIEASYTELGGYKEIIFMINGKGAYAKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EAEEVEIDIHEKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K  +G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFRQ--EAQAEYDQNRKQAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 347


>gi|228474912|ref|ZP_04059641.1| peptide chain release factor 1 [Staphylococcus hominis SK119]
 gi|228271144|gb|EEK12524.1| peptide chain release factor 1 [Staphylococcus hominis SK119]
          Length = 358

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 116/351 (33%), Positives = 187/351 (53%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +   ++ + +  +   
Sbjct: 1   MFDQLDIVEERYEQLNEMLSDPEIVNDPDKLRKYSKEQADLQKTVDVYRDYKSKREEVAE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
           + E+  E DD   ++   +    +K E+   +    F  +     D  D  +E+ A AGG
Sbjct: 61  IDEMLTETDDKEEIEMLKEEALGLKSELPELEEQLKFLLIPKDPNDEKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  LLRMYT++AE + FKTE +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLLRMYTKYAESQNFKTEIVEAAESDHGGYKEISFSVSGSGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EIE+   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEVRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG++     E+SQ +N+ +A  +L+A+LY+++LQ  EE        K+ +G
Sbjct: 240 SAVRITHIPTGIIATSS-EKSQIQNREKALKVLKARLYDMKLQ--EEQQKYAAQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    ++R+Y   P   V D R  +       +++G LD+ + A    ++
Sbjct: 297 TGDRSERVRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIIDALTLSEQ 346


>gi|290475215|ref|YP_003468101.1| peptide chain release factor RF-1 [Xenorhabdus bovienii SS-2004]
 gi|289174534|emb|CBJ81328.1| peptide chain release factor RF-1 [Xenorhabdus bovienii SS-2004]
          Length = 360

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 113/340 (33%), Positives = 176/340 (51%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L +E   L +     K  +    D      +
Sbjct: 9   LEALQERHEEILVHLGDASVIADQDRFRALSKEYAQLTDVTHCFKSWKTVQEDLQTAEMM 68

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   +  +E  D   R +   +  Q   L     D  + +LEV AG GG E+  +A
Sbjct: 69  LDDLEMREMAQEELKDAKIRNEELEQQLQLLLLPKDPDDERNCFLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +  ++GE  G K     + G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRVEIISANEGEHGGYKEVIAKVSGDQVYGHLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +IS  D +IDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVMPEIPEAELPDISPGDLKIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR+E        +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKAMSVLAARIRAAEMHKRQE--AEASERRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            R+Y   P   V D R N+      +V++G LD  ++  +
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVIEGKLDMLIQPII 345


>gi|261212226|ref|ZP_05926512.1| peptide chain release factor 2 [Vibrio sp. RC341]
 gi|260838834|gb|EEX65485.1| peptide chain release factor 2 [Vibrio sp. RC341]
          Length = 300

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 166/297 (55%), Positives = 217/297 (73%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  I ++   + D   LLELA+E +D     E    L  +++++E  +F  + SG+ DS+
Sbjct: 2   VDTIDQLDRGVDDVEGLLELAIEAEDQETFDEIGPELDELEVKLEQLEFRRMFSGDHDSS 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           D YL++ AG+GGTE+QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G 
Sbjct: 62  DCYLDLQAGSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGD 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP VD++I+IEI+ +D RID YRA
Sbjct: 122 YAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+   
Sbjct: 182 SGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAE 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E +K++IGWG QIRSYVL     +KDLRT IE  +   VLDGDLD F++A+L 
Sbjct: 242 KQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDKFIEASLK 297


>gi|229176005|ref|ZP_04303501.1| Peptide chain release factor 1 [Bacillus cereus MM3]
 gi|228607498|gb|EEK64824.1| Peptide chain release factor 1 [Bacillus cereus MM3]
          Length = 358

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 114/352 (32%), Positives = 174/352 (49%), Gaps = 12/352 (3%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G+ D       R   LN    DP +  +  + +   +E+  +   +   +E +D      
Sbjct: 3   GVLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQLR 62

Query: 71  ILLELALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
               +  ++ D  +     + +     + K   E  +   +     D  +  +EV   AG
Sbjct: 63  DAKAMLEDKLDADMRDMVKEEVSELEGQDKELSERLKILLVPKDPNDDKNVIVEVRGAAG 122

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E G
Sbjct: 123 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 182

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P   + +EI I E D R+DT+ +SG GGQ VNTT
Sbjct: 183 AHRVQRVPETESGGRIHTSTATVAVLP-EAEEVEISIHEKDVRVDTFASSGPGGQSVNTT 241

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K  +
Sbjct: 242 MSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAV 299

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 300 GTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350


>gi|328555408|gb|AEB25900.1| peptide chain release factor 1 [Bacillus amyloliquefaciens TA208]
 gi|328913779|gb|AEB65375.1| peptide chain release factor 1 [Bacillus amyloliquefaciens LL3]
          Length = 356

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 114/351 (32%), Positives = 185/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           + D   +  QR   LN    DP +  +  + +   +E+  +   +   ++ +D   +L D
Sbjct: 1   MLDRLQSIEQRYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVEVYRQYRDASEQLAD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127
              +LE  L+ D   +++E    LQR    +  + +   +     D  +  +E+   AGG
Sbjct: 61  AKAMLEDKLDADMREMVKEEISELQRETETLSERLKVLLIPKDPNDDKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE +E       G K    +I G  AY  LK E G 
Sbjct: 121 EEAALFAGNLYRMYSRYAEVQGWKTEVMEASVTGTGGYKEIIFMITGKGAYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P   + +E++I E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLP-EAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K+ +G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKF--QQEAQAEYDQNRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+G LD+ ++A +   +
Sbjct: 298 SGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQ 347


>gi|30265352|ref|NP_847729.1| peptide chain release factor 1 [Bacillus anthracis str. Ames]
 gi|42784501|ref|NP_981748.1| peptide chain release factor 1 [Bacillus cereus ATCC 10987]
 gi|47530891|ref|YP_022240.1| peptide chain release factor 1 [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|222098801|ref|YP_002532859.1| peptide chain release factor 1 [Bacillus cereus Q1]
 gi|46576768|sp|Q81JX1|RF1_BACAN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|61214595|sp|Q630R9|RF1_BACCZ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|61214623|sp|Q6HAV4|RF1_BACHK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|61214641|sp|Q72XC2|RF1_BACC1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790861|sp|B9IRW2|RF1_BACCQ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|30260030|gb|AAP29215.1| peptide chain release factor 1 [Bacillus anthracis str. Ames]
 gi|42740433|gb|AAS44356.1| peptide chain release factor 1 [Bacillus cereus ATCC 10987]
 gi|47506039|gb|AAT34715.1| peptide chain release factor 1 [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|221242860|gb|ACM15570.1| peptide chain release factor 1 [Bacillus cereus Q1]
          Length = 355

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 117/351 (33%), Positives = 182/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           + D       R   LN    DP +  +  + +   +E+  +   +   +E +D   +L D
Sbjct: 1   MLDRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQLKD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127
              +LE  L+ +   +++E    L+  +  +  + +   +     D  +  +EV   AGG
Sbjct: 61  AKAMLEDKLDAEMREMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E G 
Sbjct: 121 DEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K  +G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 347


>gi|289207525|ref|YP_003459591.1| peptide chain release factor 1 [Thioalkalivibrio sp. K90mix]
 gi|288943156|gb|ADC70855.1| peptide chain release factor 1 [Thioalkalivibrio sp. K90mix]
          Length = 361

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 114/342 (33%), Positives = 174/342 (50%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72
            +   +R + +      P   ++  + + L +E   L+      K     Q  L +   +
Sbjct: 9   LEGLAERHAEIAQLLATPDAAEDADQLRRLSQEYSQLEPVAEAWKAWHDNQAALEEARAM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L     E       E      + +          +     D+ + +LE+ AG GG E+  
Sbjct: 69  LAEDDPELRAMAEAEIETLADQAEALEAELHRHLIPKDPHDNANVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LLRMYTR+AE++ +K E L   +GE  G +     + G  AY  LK E G HR+ R
Sbjct: 129 FAGDLLRMYTRYAEQQNWKLEILSASEGEHGGYREVIARLAGQGAYSRLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ + P +D+    +I+ +D R+DT+RASGAGGQHVN TDSAVR+
Sbjct: 189 VPETESQGRIHTSAATVAILPELDEVEMPDINPADLRVDTFRASGAGGQHVNKTDSAVRL 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ+ERSQHKN+A+A   L A+L+E E     + A      K+ +G G   
Sbjct: 249 THLPTGIVVECQEERSQHKNRAKAMTYLAARLFEAER--EAQAAAQSAERKSLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +IR+Y   P   V D R N+       V+ GDLD  +   +
Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYKLEQVMAGDLDPVIDPLI 347


>gi|227524270|ref|ZP_03954319.1| peptide chain release factor 1 [Lactobacillus hilgardii ATCC 8290]
 gi|227088501|gb|EEI23813.1| peptide chain release factor 1 [Lactobacillus hilgardii ATCC 8290]
          Length = 361

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 108/352 (30%), Positives = 181/352 (51%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68
           +FD     V R   LN    DP +  +      L +E   L + ++   + +    +L D
Sbjct: 4   IFDKLQAVVDRYDELNELISDPEVIADTQRFMKLSKEEGELRDTVAAYNKYKEVSKQLDD 63

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAG 126
           +  +L   +++ D   + +   +  + +      Q + +       D  +  +E+H  AG
Sbjct: 64  DEEMLREKIDDADLESMVKDEISDFKDQKAKLEDQLKVMLLPKDPNDEKNIIMEIHGAAG 123

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E   +A  L  MY+++AE++ +K E ++  + E  G K   L+I G   Y  LK E G
Sbjct: 124 GDEGSLFAVDLFSMYSKYAERQGWKVEVIDKSETEVGGFKEIVLMITGDKVYSKLKYENG 183

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P  ++ ++I+I   D R+D YR+SGAGGQH+N T
Sbjct: 184 AHRVQRVPVTESAGRVHTSTATVGVMP-EEEDVDIDIDPKDIRVDVYRSSGAGGQHINKT 242

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L+A++Y+   Q+  E        K+ I
Sbjct: 243 SSAVRMTHLPTGIVVAMQDERSQQQNRAKAMKILKARVYDYYAQQ--EQDQYNAERKSAI 300

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       +++G+LDD + A +   +
Sbjct: 301 GTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMNGELDDIVDALILSDQ 351


>gi|242241525|ref|ZP_04795970.1| peptide chain release factor 1 [Staphylococcus epidermidis W23144]
 gi|242235068|gb|EES37379.1| peptide chain release factor 1 [Staphylococcus epidermidis W23144]
 gi|319399600|gb|EFV87855.1| peptide chain release factor 1 [Staphylococcus epidermidis FRI909]
          Length = 358

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 113/351 (32%), Positives = 185/351 (52%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +   +  + +  +   
Sbjct: 1   MFDQLDIVEERYEQLNELLSDPDVVNDADKLRKYSKEQADLQKTVDVYRSYKTKKEELQD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
           + ++  E  D   ++   +    +K E+   +       +     D  D  +E+ A AGG
Sbjct: 61  IEDMLSETSDKEEVEMLKEESSALKTELPDMEEELKILLIPKDPNDDKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L+RMY+++AE   FKTE +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLMRMYSKYAEANGFKTEIVEASESDHGGYKEVSFSVSGTGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EAEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTGV+     E+SQ +N+ +A  +L+A+LY+++LQ  EE        K+ +G
Sbjct: 240 SAVRITHLPTGVIATSS-EKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYASQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +     + +++G LD+ ++A    ++
Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLNQIMEGHLDEIVEALTLSEQ 346


>gi|310766541|gb|ADP11491.1| peptide chain release factor 2 [Erwinia sp. Ejp617]
          Length = 300

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 167/298 (56%), Positives = 214/298 (71%), Gaps = 1/298 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  + ++   L D   LLELA+E +D     E    L  +  ++   +F  + SGE DS 
Sbjct: 2   VETLDQMTQGLEDVSGLLELAVEAEDEETFNEAVAELDGLDKKLGELEFRRMFSGEYDSA 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           D Y+++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  DGE AG KSAT+ I G 
Sbjct: 62  DCYMDIQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGEVAGTKSATIKIIGD 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+GWL+ E GVHRLVR SP+DS  RRHTSFSS+++YP VDD+I+IEI+ +D RID YRA
Sbjct: 122 YAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEINPADLRIDVYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+  LRAKLYE E+QK+   
Sbjct: 182 SGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNAD 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
               E +K++IGWG QIRSYVL     +KDLRT++E  +   VLDGDLD F++A+L  
Sbjct: 242 KQTAEDNKSDIGWGSQIRSYVLDD-SRIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 298


>gi|291543206|emb|CBL16315.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus sp.
           18P13]
          Length = 361

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 115/352 (32%), Positives = 182/352 (51%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+      Q+   ++ +  DP +  ++     LM+E ++L+  +   +  +        
Sbjct: 1   MFEKLQIMEQKFEEISQRLSDPAVTTDIAVYTQLMKEYKNLEPIVQKYRAYKRSAQSMQE 60

Query: 72  LLEL-----ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
             EL        E       E     +++    E  +   L     D  +  +E+  GAG
Sbjct: 61  ARELLDAGSEDPELREMAQAEFETEKEQLAEYAEQLKILLLPKDPNDDRNVIIEIRGGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +AN L RMYT +AE R +K E L  +  E  G K  +  I G  AY  LK E G
Sbjct: 121 GEEAALFANSLYRMYTMYAESRGWKQEVLSANPTELGGFKEISFSITGEGAYSRLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS  ++ V  V  D +E+ I+ +D +ID +R+SGAGGQH+N T
Sbjct: 181 VHRVQRVPETESQGRIHTSTVTVAVL-VEADEVELAINPTDLKIDVFRSSGAGGQHINKT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRITH+PTG+VV+CQ ERSQ KNK +A  +LR++LYE   Q++++   I    + ++
Sbjct: 240 ESAVRITHLPTGLVVECQDERSQFKNKDRAMMILRSRLYERMQQEQQD--KIASQRRMQV 297

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   + D R  +      DV++G+LD+ + A     +
Sbjct: 298 GTGDRSERIRTYNF-PQGRLTDHRIGLTIYRLEDVMNGNLDEVLDALATADQ 348


>gi|319893069|ref|YP_004149944.1| Peptide chain release factor 1 [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317162765|gb|ADV06308.1| Peptide chain release factor 1 [Staphylococcus pseudintermedius
           HKU10-03]
          Length = 358

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 115/351 (32%), Positives = 180/351 (51%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +    +   +E+  L   +   ++ +    D   
Sbjct: 1   MFDQLDIVEERYEQLNELLSDPEVVSDSNLLRKYSKEQSELQKTVEVYRQYKQVKEDAEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGG 127
           +  +  E DD   ++   +    +K EV       +   +     D  D  +E+   AGG
Sbjct: 61  IELMLAETDDADEVEMLKEEASALKAEVPELEEQLKLLLIPKDPNDEKDVIVEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+++AE  +FK E +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLFRMYSKFAESHRFKLEIVEATESDHGGYKEISFSVSGDGAYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTGV+     E+SQ +N+ +A  +L+A+LY+++LQ  EE        K+ +G
Sbjct: 240 SAVRITHIPTGVIATSS-EKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYAAQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G LD+ + A    ++
Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIVDALTMHEQ 346


>gi|226307404|ref|YP_002767364.1| peptide chain release factor 1 [Rhodococcus erythropolis PR4]
 gi|229489997|ref|ZP_04383850.1| peptide chain release factor 1 [Rhodococcus erythropolis SK121]
 gi|226186521|dbj|BAH34625.1| peptide chain release factor 1 [Rhodococcus erythropolis PR4]
 gi|229323098|gb|EEN88866.1| peptide chain release factor 1 [Rhodococcus erythropolis SK121]
          Length = 359

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 116/346 (33%), Positives = 174/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +   + L  +  DP L  +   A+ + +    L   +S   ++     D     EL
Sbjct: 10  IDDILAEHAGLEAQMSDPALHNDPAAARRVGKRFSELSPIMSTYNKLTAAQDDLEAAREL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A ++   +      +       +    Q         D +D  LEV +G GG ES  +A+
Sbjct: 70  AADDSSFAAEIPDLEAEVAQLEQTLTDQL--APRDPHDGDDIVLEVKSGEGGEESALFAS 127

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190
            L RMY R+AE+  ++ E L+    +  G K ATL IK         +  LK E GVHR+
Sbjct: 128 DLARMYVRYAERHGWRVEILDATVSDLGGYKEATLSIKSKSDTPDGVWARLKFEGGVHRV 187

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + VYP  ++  +++I ESD RID YR+SG GGQ VNTTDSAV
Sbjct: 188 QRVPVTESQGRVHTSAAGVLVYPEPEEVEQVQIDESDLRIDVYRSSGKGGQGVNTTDSAV 247

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG+VV CQ ERSQ +NKA+A  +L A+L  +  +  +  A+ G  S+   +   
Sbjct: 248 RITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQVVAEEAADAEASAGRQSQVRTVDRS 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R   +  +   VLDG+LD  + A     +
Sbjct: 308 ERIRTYNF-PENRITDHRIGFKSHNLDAVLDGELDALLDALGKADR 352


>gi|254521932|ref|ZP_05133987.1| peptide chain release factor 2 [Stenotrophomonas sp. SKA14]
 gi|219719523|gb|EED38048.1| peptide chain release factor 2 [Stenotrophomonas sp. SKA14]
          Length = 308

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 162/295 (54%), Positives = 212/295 (71%), Gaps = 1/295 (0%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           I  + D L D   LLELA  E D         +L + +  VE  +F+ + SGE D+  A+
Sbjct: 4   IASVLDGLTDATELLELAESEQDEDTALAVVADLDKHQAHVEKLEFQRMFSGEMDNAAAF 63

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +++ AGAGGTE+QDWA +LLRMY RW E R +KTE +E+  G+ AGIKSATL ++G  AY
Sbjct: 64  VDIQAGAGGTEAQDWAEILLRMYLRWCESRGWKTELMEVSGGDVAGIKSATLRVEGDYAY 123

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           GWLK E GVHRLVR SP+DS++RRHTSF+S++V P +DD+I+I I+ +D R D YR+SGA
Sbjct: 124 GWLKTETGVHRLVRKSPFDSDNRRHTSFTSVFVSPEIDDNIDITINPADLRTDVYRSSGA 183

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVN T+SAVRITHIPT +VV CQ  RSQH+N+  A  ML AKLYELE+QKR    + 
Sbjct: 184 GGQHVNKTESAVRITHIPTNIVVACQTGRSQHQNRDNAMKMLAAKLYELEIQKRNAEKDA 243

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            E++K++IGWG QIR+YVL     +KDLRT IE++    VLDGDLD+F++A+L  
Sbjct: 244 VEATKSDIGWGSQIRNYVLD-QSRIKDLRTGIERSDTQKVLDGDLDEFVEASLKA 297


>gi|310767482|gb|ADP12432.1| peptide chain release factor 1 [Erwinia sp. Ejp617]
          Length = 360

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 111/337 (32%), Positives = 174/337 (51%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     ++ Q    D      +
Sbjct: 9   LEALQERHEEVEALLGDAGVIADQERFRALSREYAQLTDVSRCFRQWQQCQEDMATAEMM 68

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   +  +E            +  Q   L     D  + YLEV AG GG E+  +A
Sbjct: 69  LGDAEMREMAQEELQAARAASDELQQQLQVLLLPKDPDDERNCYLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R++K E +  ++GE  G K     + G  AYG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESRRWKVEVMSANEGEHGGYKEVIAKVIGEGAYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +I+ SD +IDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A  +L +++   E+ +R++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARRQQE--ESSTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      + ++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTIYRLDEAMEGKLDALIE 342


>gi|237740336|ref|ZP_04570817.1| peptide chain release factor 1 [Fusobacterium sp. 2_1_31]
 gi|229422353|gb|EEO37400.1| peptide chain release factor 1 [Fusobacterium sp. 2_1_31]
          Length = 357

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 119/351 (33%), Positives = 184/351 (52%), Gaps = 11/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +  V R   LN     P +  +  +     +    +   +   KE +  + D   
Sbjct: 1   MFDKLEEVVARYEELNQMLVSPEVLADSKKMIECNKAINEITEIVEKYKEYKKYVDDIEF 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGG 127
           + E    E D  + +  ++ L+  + ++       +   L   + D  +  +E+  GAGG
Sbjct: 61  IKESFKTEKDPDMKEMLNEELKEAEEKLPSLEEELKILLLPKDKNDDKNVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE++K+K E +E  DGE  G+K     I G  AY  LK E GV
Sbjct: 121 DEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELNGLKEVAFTIIGLGAYSRLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +++ R HTS +++ V P V+D  E+ +   D +IDTYR+ GAGGQHVN TD
Sbjct: 181 HRVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVTVDPKDLKIDTYRSGGAGGQHVNMTD 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VVQCQ ERSQ KN+ +A   L  KLYE+E +K+          + ++G
Sbjct: 241 SAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQRSEVE--SERRLQVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   + D R  +        LDGD+D+ + A +   +
Sbjct: 299 TGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQ 348


>gi|188534903|ref|YP_001908700.1| Putative peptide chain release factor 2 [Erwinia tasmaniensis
           Et1/99]
 gi|188029945|emb|CAO97829.1| Putative peptide chain release factor 2 [Erwinia tasmaniensis
           Et1/99]
          Length = 300

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 167/298 (56%), Positives = 214/298 (71%), Gaps = 1/298 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  + ++   L D   LLELA+E +D     E    L  +  ++   +F  + SGE DS 
Sbjct: 2   VDTLDQMTQGLEDVSGLLELAVEAEDEETFNEAVAELDGLDKKLAELEFRRMFSGEYDSA 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           D Y+++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  DGE AG KSAT+ I G 
Sbjct: 62  DCYMDIQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGEVAGTKSATIKIIGD 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+GWL+ E GVHRLVR SP+DS  RRHTSFSS+++YP VDD+I+IEI+ +D RID YRA
Sbjct: 122 YAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEINPADLRIDVYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+  LRAKLYE E+QK+   
Sbjct: 182 SGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNAD 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
               E +K++IGWG QIRSYVL     +KDLRT++E  +   VLDGDLD F++A+L  
Sbjct: 242 KQTAEDNKSDIGWGSQIRSYVLDD-SRIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 298


>gi|302392966|ref|YP_003828786.1| bacterial peptide chain release factor 1 (bRF-1) [Acetohalobium
           arabaticum DSM 5501]
 gi|302205043|gb|ADL13721.1| bacterial peptide chain release factor 1 (bRF-1) [Acetohalobium
           arabaticum DSM 5501]
          Length = 359

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 117/354 (33%), Positives = 185/354 (52%), Gaps = 15/354 (4%)

Query: 13  LFD----WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           + D     D+A  R   L     DP +  N  + + L +E   L   +   ++ ++ + +
Sbjct: 1   MLDCKEALDDAEARYEKLQKMLSDPEVINNQSKFQKLSKEHAELKKLVKKYRKYKEIMAE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAG 124
                EL   EDD   ++     L  ++ + E  +       +     D  +  +E+ AG
Sbjct: 61  IEEAKELLEMEDDEEAVELAKMELAELEPKQEKLEEELPLMLIPEDPNDEKNVIVEIRAG 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
            GG E+  +A  L RMY+R+AEK+ +  + +     E  G K    +++G  AY  LK E
Sbjct: 121 TGGDEAALFAGELYRMYSRYAEKQDWDVDIMSSSSSEVGGFKEMIFVVEGKGAYSRLKYE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S+ R HTS +++ V P   + ++IEI+++D  I+TYR+SG GGQ VN
Sbjct: 181 SGVHRVQRVPETESSGRIHTSTATVAVLP-EAEDVDIEINQNDLTIETYRSSGPGGQSVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRITH PTGVVV CQ E+SQHKNK +A  +LR+++ E      E+ A   E  K 
Sbjct: 240 TTDSAVRITHEPTGVVVSCQDEKSQHKNKRKAMRVLRSRIQEKIE--AEKQAEEAEKRKM 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IG G    +IR+Y   P   + D R N+       +LDG++D+ +   +   +
Sbjct: 298 QIGSGGRSERIRTYNF-PQGRITDHRINLTTHQMESILDGEIDELVDELVTADQ 350


>gi|170768314|ref|ZP_02902767.1| peptide chain release factor 1 [Escherichia albertii TW07627]
 gi|170123080|gb|EDS92011.1| peptide chain release factor 1 [Escherichia albertii TW07627]
          Length = 360

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 114/337 (33%), Positives = 177/337 (52%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQDRFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+      ++ +   +  Q   L     D  DA+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERDAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAETRRWQVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIE 342


>gi|227499754|ref|ZP_03929854.1| peptide chain release factor RF1 [Anaerococcus tetradius ATCC
           35098]
 gi|227218140|gb|EEI83406.1| peptide chain release factor RF1 [Anaerococcus tetradius ATCC
           35098]
          Length = 358

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 117/351 (33%), Positives = 184/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  ++  +    L  K  DP +  ++     + RE   L   +    +I+D       
Sbjct: 1   MFENIEHIKENYKDLEKKMIDPEVLADISRLTKITREYNSLKPIVEKYDQIKDAESTIEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKL----EVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             EL  E DD  ++    + ++  +       E  +   +     DS D  +E+  GAGG
Sbjct: 61  NKELINEADDQDMIDMLKEEIKENEKLLDQYNEEMKILLIPKDPNDSRDVIVEIRPGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY  +A+K  +KTE +E+      GIK AT +++G  AY   K E GV
Sbjct: 121 DEAGLFAGDLYRMYHMYADKEGYKTEDVEVTPQGVGGIKDATFMVRGEGAYSRFKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P VD+     +  +D R D +R+SG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEVDELDV-HVDPNDIRTDVFRSSGNGGQSVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+VV  Q E+SQ KNK +A  +L A++YELE +KR +   I ++ K+++G
Sbjct: 240 SAVRLTHIPTGIVVSMQDEKSQIKNKEKAMKILLARIYELEEEKRNKE--IADNRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   + D R N       D L+G + + + + +A  +
Sbjct: 298 TGDRSERIRTYNF-PQGRITDHRINKTIYQLDDFLNGGIGEMIDSLIAEDQ 347


>gi|167032113|ref|YP_001667344.1| peptide chain release factor 2 [Pseudomonas putida GB-1]
 gi|166858601|gb|ABY97008.1| peptide chain release factor 2 [Pseudomonas putida GB-1]
          Length = 304

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 167/302 (55%), Positives = 220/302 (72%), Gaps = 1/302 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L   +  + ++ + L D   LL++A+EE+D + + +    L+ ++  +   +F  + SGE
Sbjct: 2   LAQVVETLDKLSNGLGDCQDLLDMAVEENDENAVGDVVAELEELEENLAKLEFRRMFSGE 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+ +GE AGIK AT+ 
Sbjct: 62  MDMNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVH 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD +EIEI+ SD RID
Sbjct: 122 IKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEIDDKVEIEINPSDLRID 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYELE+QK
Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R   +   E SK++IGWG QIRSYVL     +KDLRT +E++    VLDGDLD +++A+L
Sbjct: 242 RNAASQALEDSKSDIGWGHQIRSYVLDD-SRIKDLRTGVERSDCQKVLDGDLDQYLEASL 300

Query: 352 AI 353
             
Sbjct: 301 KQ 302


>gi|311107121|ref|YP_003979974.1| peptide chain release factor [Achromobacter xylosoxidans A8]
 gi|310761810|gb|ADP17259.1| peptide chain release factor 2 [Achromobacter xylosoxidans A8]
          Length = 300

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 156/298 (52%), Positives = 217/298 (72%), Gaps = 1/298 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  +  +   L D+  L ELA  +DD + L+    +    + ++E  +F  + S  AD  
Sbjct: 2   VETLTALGSGLADSNELFELAASDDDDATLESIEQDADAFQEKLEALEFRRMFSNPADPL 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           + +L++ AGAGGTE+QDWA+MLLR Y ++AE++ FK E LE  DG+ AG+KSAT+ I+G 
Sbjct: 62  NCFLDIQAGAGGTEAQDWASMLLRQYLKYAERKGFKAEVLEESDGDVAGLKSATIKIEGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+G+L+ E GVHRLVR SP+DS+  RHTSF+S++VYP VD+S E+E++ +D R+DTYRA
Sbjct: 122 YAFGYLRTETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRVDTYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQH+N TDSAVR+THIPTG+VVQCQ +RSQH+N+A+A  ML++KLYELE++ R   
Sbjct: 182 SGAGGQHINKTDSAVRLTHIPTGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMAE 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
               E SKT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 242 QQKLEDSKTDVGWGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQ 298


>gi|242371609|ref|ZP_04817183.1| peptide chain release factor 1 [Staphylococcus epidermidis
           M23864:W1]
 gi|242350676|gb|EES42277.1| peptide chain release factor 1 [Staphylococcus epidermidis
           M23864:W1]
          Length = 358

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 115/351 (32%), Positives = 183/351 (52%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +   +  + +  +   
Sbjct: 1   MFDQLDIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRSYKSKKEELED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
           + E+  E  D   ++   +    +K E+   +       +     D  D  +E+ A AGG
Sbjct: 61  IEEMLRETSDKEEVEMLKEESTALKNELPDMEEELKILLIPKDPNDEKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L+RMY+++AE   FKTE +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLMRMYSKYAEANGFKTEIVEASESDHGGYKEISFSVSGSGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTGVV     E+SQ +N+ +A  +L+A+LY+++LQ  EE        K+ +G
Sbjct: 240 SAVRITHLPTGVVATSS-EKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYASQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G LD+ + A    ++
Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGHLDEIIDALTLSEQ 346


>gi|237802457|ref|YP_002887651.1| peptide chain release factor 1 [Chlamydia trachomatis B/Jali20/OT]
 gi|231273691|emb|CAX10469.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis
           B/Jali20/OT]
          Length = 359

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 110/338 (32%), Positives = 173/338 (51%), Gaps = 11/338 (3%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI----QDRLCDNLILLELA 76
           +RL  +  +  DP+++ N  E   L +E   L    +  + +    +    D L L    
Sbjct: 10  KRLEEVEKQISDPNIFSNPKEYSSLSKEHARLSEIKNAHESLVATKKILQDDKLALSTEK 69

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
             E    + +      + ++   +  +   +     D     +E+ AG GG E+  +   
Sbjct: 70  DPEIVAMLEEGVLVGEEAVERLSKQLENLLIPPHPDDDLSVIMELRAGTGGDEAALFVGD 129

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
            +RMY  +A  + ++ E L   + +  G K   + I G +   +L+ E G HR+ R+   
Sbjct: 130 CVRMYHLYAASKGWQCEVLSTSESDLGGYKEYVMGISGASVKRFLQYEAGTHRVQRVPET 189

Query: 197 DSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           ++  R HTS  ++ V P   +D  E+ I E D RIDT+R+SGAGGQHVN TDSAVRITHI
Sbjct: 190 ETQGRVHTSAVTVAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSAVRITHI 249

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           P+GVVV CQ ERSQHKNKA+A  +L+A++ + E+QKR + A+   S   ++G G    +I
Sbjct: 250 PSGVVVTCQDERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRS--AQVGSGDRSERI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           R+Y   P   V D R  +   +   V++G+LD    A 
Sbjct: 308 RTYNF-PQNRVTDHRIGLTLYNLDRVMEGELDMITTAL 344


>gi|46581318|ref|YP_012126.1| peptide chain release factor 1 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120601501|ref|YP_965901.1| peptide chain release factor 1 [Desulfovibrio vulgaris DP4]
 gi|61214640|sp|Q727E1|RF1_DESVH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223554|sp|A1VAK8|RF1_DESVV RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|46450740|gb|AAS97386.1| peptide chain release factor 1 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120561730|gb|ABM27474.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfovibrio
           vulgaris DP4]
 gi|311234981|gb|ADP87835.1| peptide chain release factor 1 [Desulfovibrio vulgaris RCH1]
          Length = 357

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 113/345 (32%), Positives = 174/345 (50%), Gaps = 11/345 (3%)

Query: 13  LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCD 68
           +F   +N   +   L  +     ++ +    + L +    L   +      KE++  L D
Sbjct: 1   MFAKLENLELKFEDLEQQLSSAEVFNDQDRYRKLTKAHADLKQVVDAFRRYKEMKQNLAD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           N  LL  +  E      +E       +    +  +   L     D  +  LE+ AG GG 
Sbjct: 61  NKELLGDSDHEIRAMAHEEIKAIEAALPDIEQELKILLLPRDPMDDKNILLEIRAGTGGE 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMYTR+AE   +K E L   D +  G K    LI G   Y  LK E G H
Sbjct: 121 EASLFAADLFRMYTRYAEIMGWKVEVLSASDSDTGGYKEIIALIAGDKVYSRLKYESGTH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS +++ V P   + ++++I   D RID YRASGAGGQHVN T+S
Sbjct: 181 RVQRVPATEAQGRIHTSAATVAVMP-EAEEVDVDIRPDDLRIDVYRASGAGGQHVNKTES 239

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VV CQ E+SQHKNKA+A  +L +++ + E ++    + I ++ +  +G 
Sbjct: 240 AVRITHLPTGIVVACQDEKSQHKNKAKAMKVLISRVLQAEQER--AHSVIADARRALVGS 297

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G    +IR+Y   P   + D R N+   S   V++G+L   + A 
Sbjct: 298 GDRSERIRTYNY-PQSRITDHRINLTLYSLDKVMEGELAPLVDAL 341


>gi|117926919|ref|YP_867536.1| peptide chain release factor 1 [Magnetococcus sp. MC-1]
 gi|226739111|sp|A0LDT7|RF1_MAGSM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|117610675|gb|ABK46130.1| bacterial peptide chain release factor 1 (bRF-1) [Magnetococcus sp.
           MC-1]
          Length = 361

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 112/348 (32%), Positives = 173/348 (49%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   R + L+    DP    +        +E   L+  ++  +     L       E+
Sbjct: 7   LESLTSRHAELSAHLADPTTVSDSKRFAAYSKEFSDLEPVVAAWQAHLAILQQLAETDEM 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130
             E  D + +++ +   +        +         L     D  +  LE+ AG GG E+
Sbjct: 67  LAEAGDDAEMRQMAREERETLKNKLEQSQKHLHLMLLPKDPNDDKNVILEIRAGTGGEEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             + + L RMY R+AE + ++ E L     +  G K    +++G  AY  LK E GVHR+
Sbjct: 127 ALFVSDLFRMYGRFAEIKGWRIEMLSSSATDLGGYKELIAMVQGKGAYMGLKYESGVHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            RI   ++  R HTS  ++ + P   D +E+ I + D RID YR+SG GGQ VNTTDSAV
Sbjct: 187 QRIPVTETGGRIHTSAVTVAILP-EADEVELHIEDKDLRIDVYRSSGPGGQSVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VV CQ E+SQHKNKA+A  +L+A+L  L+ Q++   +   E+ K ++G G 
Sbjct: 246 RITHLPTGLVVICQDEKSQHKNKAKAMKVLQARL--LDAQQQAADSQRAEARKGQVGSGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       VL G L + + A  A  +
Sbjct: 304 RSERIRTYNF-PQSRVTDHRINLTLHKLDQVLQGGLAEVVDALTAHDQ 350


>gi|229020548|ref|ZP_04177293.1| Peptide chain release factor 1 [Bacillus cereus AH1273]
 gi|229026769|ref|ZP_04183101.1| Peptide chain release factor 1 [Bacillus cereus AH1272]
 gi|228734492|gb|EEL85154.1| Peptide chain release factor 1 [Bacillus cereus AH1272]
 gi|228740768|gb|EEL91021.1| Peptide chain release factor 1 [Bacillus cereus AH1273]
          Length = 358

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 118/352 (33%), Positives = 182/352 (51%), Gaps = 12/352 (3%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLC 67
           G+ D       R   LN    DP +  +  + +   +E+  +   +   +E +D   +L 
Sbjct: 3   GVLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQLR 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAG 126
           D   +LE  L+ +   +++E    L+  +  +  + +   +     D  +  +EV   AG
Sbjct: 63  DAKAMLEDKLDAEMREMVKEEVSELEGQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAG 122

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E G
Sbjct: 123 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 182

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P   + +EI I E D R+DT+ +SG GGQ VNTT
Sbjct: 183 AHRVQRVPETESGGRIHTSTATVAVLP-EAEEVEINIHEKDVRVDTFASSGPGGQSVNTT 241

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K  +
Sbjct: 242 MSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAV 299

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 300 GTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350


>gi|156932658|ref|YP_001436574.1| hypothetical protein ESA_00441 [Cronobacter sakazakii ATCC BAA-894]
 gi|156530912|gb|ABU75738.1| hypothetical protein ESA_00441 [Cronobacter sakazakii ATCC BAA-894]
          Length = 293

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 169/290 (58%), Positives = 209/290 (72%), Gaps = 1/290 (0%)

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D   LLELA+E DD     E    L +++ ++   +F  + SGE DS D YL++ A
Sbjct: 3   QGLDDVAGLLELAVEADDEETFNEAVAELDQLEAKLAQLEFRRMFSGEYDSADCYLDIQA 62

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTE+QDWA+MLLRMY RWAE R FKTE +E  +GE AG+KSAT+ I G  A+GWL+ 
Sbjct: 63  GSGGTEAQDWASMLLRMYLRWAEARGFKTEIIEESEGEVAGLKSATIKISGDYAFGWLRT 122

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS  RRHTSFSS +VYP V+D I+IEI+ +D RID YRASGAGGQHV
Sbjct: 123 ETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVEDDIDIEINPADLRIDVYRASGAGGQHV 182

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRITHIPTG V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K
Sbjct: 183 NRTESAVRITHIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQALEDNK 242

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           ++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 243 SDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 291


>gi|319945454|ref|ZP_08019714.1| peptide chain release factor RF1 [Lautropia mirabilis ATCC 51599]
 gi|319741240|gb|EFV93667.1| peptide chain release factor RF1 [Lautropia mirabilis ATCC 51599]
          Length = 359

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 114/343 (33%), Positives = 174/343 (50%), Gaps = 7/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    RL  LN +     + +++   K L +E       +      +    D     ++
Sbjct: 9   LDRMQNRLEELNAQLASEDIGKDISLLKKLNQEHAETSEVLDTYALWKQAGADLEAARQM 68

Query: 76  ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             E D      E   + +   +   E  ++  L     D+ +A LE+ AG GG ES  +A
Sbjct: 69  REEPDMREFADEEIADAETRLQATQERIEYLLLPRDPDDARNAILEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE R ++TE L   + E  G +   + + G   YG L+ E G HR+ R+ 
Sbjct: 129 GDLLRMYLRYAEHRGWQTEILSASESELGGYREVIVQVSGQQVYGRLRYESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V    + + +IEIS  D RID +RASGAGGQHVN T+SAVRITH
Sbjct: 189 VTESQGRIHTSACTVAVMAEAEPTGDIEISPDDLRIDVFRASGAGGQHVNKTESAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+V +CQ +RSQH+N+ +A  +L  +L +   ++RE  A      K+ +G G    +
Sbjct: 249 LPTGIVAECQDDRSQHRNRDKAMTVLLTRLRDA--RERERAAETSAHRKSLVGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IR+Y   P   + D R N+       ++DGDLD+   A +  +
Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYKLQTIIDGDLDELTDALMKAR 348


>gi|229033962|ref|ZP_04188916.1| Peptide chain release factor 1 [Bacillus cereus AH1271]
 gi|228728388|gb|EEL79410.1| Peptide chain release factor 1 [Bacillus cereus AH1271]
          Length = 358

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 114/352 (32%), Positives = 175/352 (49%), Gaps = 12/352 (3%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G+ D       R   LN    DP +  +  + +   +E+  +   +   +E +D      
Sbjct: 3   GVLDRLQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQLR 62

Query: 71  ILLELALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
               +  ++ D  + +   + +     + K   E  +   +     D  +  +EV   AG
Sbjct: 63  DAKAMLEDKLDADMREMVKEEVSELEGQDKELSERLKILLVPKDPNDDKNVIVEVRGAAG 122

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E G
Sbjct: 123 GDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENG 182

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P   + +EI I E D R+DT+ +SG GGQ VNTT
Sbjct: 183 AHRVQRVPETESGGRIHTSTATVAVLP-EAEEVEISIHEKDVRVDTFASSGPGGQSVNTT 241

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K  +
Sbjct: 242 MSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAV 299

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 300 GTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350


>gi|314934187|ref|ZP_07841548.1| peptide chain release factor 1 [Staphylococcus caprae C87]
 gi|313653092|gb|EFS16853.1| peptide chain release factor 1 [Staphylococcus caprae C87]
          Length = 358

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 113/351 (32%), Positives = 183/351 (52%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +   +  + +  +   
Sbjct: 1   MFDQLDIVEERYEQLNEMLSDPDVVNDSDKLRKYSKEQADLQKTVEVYRSYKSKKEELED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
           + E+  E  D   +    +    +K E+   +       +     D  D  +E+ A AGG
Sbjct: 61  IEEMLKETSDKEEVDMLKEESASLKAELPEMEEELKILLIPKDPNDEKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L+RMY+++AE   FKTE +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLMRMYSKYAEAYGFKTEIVEASESDHGGYKEISFSVSGSGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTGV+     E+SQ +N+ +A  +L+A+LY+++LQ  EE        K+ +G
Sbjct: 240 SAVRITHLPTGVIATSS-EKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYASQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    ++R+Y   P   V D R  +       +++G+LD+ + A    ++
Sbjct: 297 TGDRSERVRTYNY-PQSRVTDHRIGLTLQKLGQIMEGNLDEIIDALTLSEQ 346


>gi|126209498|ref|YP_001054723.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           L20]
 gi|126098290|gb|ABN75118.1| Peptide chain release factor 1 (RF-1) [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
          Length = 333

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 109/324 (33%), Positives = 175/324 (54%), Gaps = 7/324 (2%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
             +  + +   +E   L+  ++     +    D      L  + D   +  E     +  
Sbjct: 2   INDQDKFRAYSKEYSQLEEVVTTFNRWKKLNNDIEEAQILLDDPDMKDMAAEEIAENKAE 61

Query: 96  KLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
              +E   Q   L     D  +A+LE+ AG GG E+  +A  L RMY+R+ E ++++ E 
Sbjct: 62  IENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFAGDLYRMYSRYCESKRWRIEE 121

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +  ++ E+ G K   + I G   YG LK E G HR+ R+   +S  R HTS  ++ V P 
Sbjct: 122 MSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPE 181

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA
Sbjct: 182 LPESEMPEINPTDLRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKA 241

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIE 331
           +A  +L +++ ++E +++       ++ +  +G G +   IR+Y   P   V D R N+ 
Sbjct: 242 KALAVLASRIVQVEQERQAAEQ--ADTRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLT 298

Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355
                +V++G +D+ ++  +   +
Sbjct: 299 VYRLDEVMNGKIDELIQPIITEYQ 322


>gi|314935933|ref|ZP_07843283.1| peptide chain release factor 1 [Staphylococcus hominis subsp.
           hominis C80]
 gi|313655939|gb|EFS19681.1| peptide chain release factor 1 [Staphylococcus hominis subsp.
           hominis C80]
          Length = 358

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 116/351 (33%), Positives = 187/351 (53%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +   ++ + +  +   
Sbjct: 1   MFDQLDIVEERYEQLNEMLSDPEIVNDPDKLRKYSKEQADLQKTVDVYRDYKSKREEVAE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
           + E+  E DD   ++   +    +K E+   +    F  +     D  D  +E+ A AGG
Sbjct: 61  IDEMLTETDDKEEIEMLKEEASGLKGELPELEEQLKFLLIPKDPNDEKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  LLRMYT++AE + FKTE +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLLRMYTKYAESQNFKTEIVEAAESDHGGYKEISFSVSGSGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EIE+   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEVRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG++     E+SQ +N+ +A  +L+A+LY+++LQ  EE        K+ +G
Sbjct: 240 SAVRITHIPTGIIATSS-EKSQIQNREKALKVLKARLYDMKLQ--EEQQKYAAQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    ++R+Y   P   V D R  +       +++G LD+ + A    ++
Sbjct: 297 TGDRSERVRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIIDALTLSEQ 346


>gi|283785500|ref|YP_003365365.1| peptide chain release factor 1 [Citrobacter rodentium ICC168]
 gi|282948954|emb|CBG88557.1| peptide chain release factor 1 [Citrobacter rodentium ICC168]
          Length = 360

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 113/337 (33%), Positives = 179/337 (53%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + +    D      +
Sbjct: 9   LEALHERHEEVQALLGDAETIADQERFRALSREYAQLSDVSRCFTDWRQVQDDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+   +  ++ +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQDELRDAKEKSEQLEQQLQLLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E + +++GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAETRRWRVEIMSMNEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +I+ +D RIDTYR+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTYRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQE--EASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIE 342


>gi|27904871|ref|NP_777997.1| peptide chain release factor 2 [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
 gi|27904269|gb|AAO27102.1| peptide chain release factor 2 [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
          Length = 337

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 150/334 (44%), Positives = 219/334 (65%), Gaps = 1/334 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              RL  +N + + P  W++    K + +E+  L + ++ I +I + + + + +L L   
Sbjct: 2   KKNRLLEINMELKLPETWKHPSLIKKINKEKNQLISVVTQITKIDNDVQELIDILNLENS 61

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
            +  SIL       + I+  +   +  S+  G+ D    Y+++ +G+GG E+QDWA+MLL
Sbjct: 62  NNINSILDNVLYEFKNIEKSIHELEKCSMFLGKYDYLSCYVDIQSGSGGVEAQDWASMLL 121

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RWAE +KFK + +E   GE  GIKSAT+ + G  A+GW + E G+HRLVR SP+++
Sbjct: 122 RMYVRWAESKKFKIDIIEQTYGEVVGIKSATIEVLGKYAFGWFRTETGIHRLVRKSPFNA 181

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           + RRHTSFSS++VYP++DD+I ++I+  D +ID YRASGAGGQHVN T+SAVRI H+PTG
Sbjct: 182 HHRRHTSFSSVYVYPILDDAINVDINTRDLKIDVYRASGAGGQHVNKTESAVRIRHLPTG 241

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           +VVQCQ +RSQHKNK QA   L+AKLYE  + +++    I E++K  IGWG QIRSY L 
Sbjct: 242 IVVQCQNDRSQHKNKDQAMKQLKAKLYEQLINEKKCQQKILENNKLNIGWGHQIRSYTLD 301

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               +KDLRT +E  +   VLDG LD F++ +L 
Sbjct: 302 -NSRIKDLRTGVESKNIQSVLDGGLDLFVECSLR 334


>gi|302342174|ref|YP_003806703.1| peptide chain release factor 1 [Desulfarculus baarsii DSM 2075]
 gi|301638787|gb|ADK84109.1| peptide chain release factor 1 [Desulfarculus baarsii DSM 2075]
          Length = 361

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 118/346 (34%), Positives = 176/346 (50%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLIL 72
            +    R + +  +  DP++  N        +E   L   +       + +  L  N +L
Sbjct: 11  LEEVEARFNAVERELADPNIVANQENFMKRSKEHAELSQLVECFRSYNKYEQELEQNRLL 70

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +    EE       E       +    +  +   L     D  +  LE+ AG GG E+  
Sbjct: 71  MADDDEELAALAGVEVEQAETALVDLEQRMRLLLLPQDPRDEKNVVLEIRAGTGGDEAAL 130

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LLRMY R+AE +++KTE L  H     G K    LI G  AY  LK E G HR+ R
Sbjct: 131 FAAELLRMYLRYAELKRWKTEILSQHPTNAGGFKEVIALITGRGAYSQLKYESGAHRVQR 190

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P   D +E++I   + RID +R+SG GGQHVNTTDSAVRI
Sbjct: 191 VPATESQGRVHTSAVTVAVLP-EADEVEVDIKPEELRIDYFRSSGPGGQHVNTTDSAVRI 249

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV CQ E+SQHKNKA+A  +L A+L  LE  ++E+ A +  + ++++G G   
Sbjct: 250 THLPTGLVVSCQDEKSQHKNKAKALKVLAARL--LEKMEQEQQAALAANRRSQVGSGDRS 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +      +VL G+L+  +   +A  +
Sbjct: 308 ERIRTYNF-PQGRVTDHRIGLTIYKLEEVLVGELELIIPHLVAYFQ 352


>gi|146328937|ref|YP_001209831.1| peptide chain release factor 2 [Dichelobacter nodosus VCS1703A]
 gi|146232407|gb|ABQ13385.1| peptide chain release factor 2 [Dichelobacter nodosus VCS1703A]
          Length = 305

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 163/301 (54%), Positives = 212/301 (70%), Gaps = 1/301 (0%)

Query: 53  DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112
              +  +  I   L D   L+ LA +E+D  ++Q    +++R++  VE  +F  + SGE 
Sbjct: 2   QTVVLGLDNIHQGLNDARELMALAEDENDEELVQSARLDIERLQKSVEILEFRRMFSGEL 61

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D+N+A+L++ +G+GGTE+QDWA ML RMY RW E + F TE LE   G+ AGIKSAT+  
Sbjct: 62  DANNAFLDIQSGSGGTEAQDWAEMLERMYLRWGEAKGFTTELLEETPGDVAGIKSATIRF 121

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  AYGWLK E GVHRLVR SP+D+N+RRHTSF++++V P +DD+IEI+I+ +D RID 
Sbjct: 122 TGEYAYGWLKTEIGVHRLVRKSPFDANNRRHTSFAAVFVSPEIDDAIEIDINPADLRIDV 181

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN T+SAVRITH+PTG VVQ Q  RSQH+NK      LRAKLY+LEL KR
Sbjct: 182 YRASGAGGQHVNRTESAVRITHLPTGTVVQSQDSRSQHQNKQTCMRHLRAKLYQLELHKR 241

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            E A   E SK++IGWG QIRSYVL   Q +KDLRT  E ++   VLDGDLD F++ +L 
Sbjct: 242 SESAQALEDSKSDIGWGNQIRSYVLD-QQRIKDLRTGYETSNTQAVLDGDLDPFIQESLK 300

Query: 353 I 353
            
Sbjct: 301 Q 301


>gi|154687816|ref|YP_001422977.1| peptide chain release factor 1 [Bacillus amyloliquefaciens FZB42]
 gi|154353667|gb|ABS75746.1| PrfA [Bacillus amyloliquefaciens FZB42]
          Length = 359

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 113/354 (31%), Positives = 186/354 (52%), Gaps = 12/354 (3%)

Query: 10  LGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---R 65
           +  + D   +  QR   LN    DP +  +  + +   +E+  +   +   ++ +D   +
Sbjct: 1   MKTVLDRLQSIEQRYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVEVYRQYRDASEQ 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAG 124
           L D   +LE  L+ D   +++E    LQ     +  + +   +     D  +  +E+   
Sbjct: 61  LADAKAMLEEKLDADMREMVKEEISELQGETETLSERLKVLLIPKDPNDDKNVIMEIRGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L RMY+R+AE + +KTE +E +     G K    +I G  AY  LK E
Sbjct: 121 AGGEEAALFAGNLYRMYSRYAEIQGWKTEVMEANVTGTGGYKEIIFMITGKGAYSKLKYE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   +S  R HTS +++   P   + +E++I E D R+DT+ +SG GGQ VN
Sbjct: 181 NGAHRVQRVPETESGGRIHTSTATVACLP-EAEEVEVDIHEKDIRVDTFASSGPGGQSVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K+
Sbjct: 240 TTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKF--QQEAQAEYDQTRKS 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +G G    +IR+Y   P   V D R  +       +L+G LD+ ++A +   +
Sbjct: 298 AVGSGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQ 350


>gi|269837927|ref|YP_003320155.1| peptide chain release factor 1 [Sphaerobacter thermophilus DSM
           20745]
 gi|269787190|gb|ACZ39333.1| peptide chain release factor 1 [Sphaerobacter thermophilus DSM
           20745]
          Length = 361

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 183/346 (52%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLIL 72
            D    R   L+    DP +  N  +     RER  L+  ++     K +   + +   L
Sbjct: 8   LDQLEARFEELDRLLADPEVVTNPEKLAEYGRERADLEEVVTTYRTRKRVDAEIAEAESL 67

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L     + +    +E     +  +      +   +     D  +  +E+ AG GG E+  
Sbjct: 68  LRSGDPDLEELAEEELKRLREERERLDNEIRMLLVPKDPNDEKNVIVEIRAGTGGEEAAL 127

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AEKR +K + +  ++    G K     ++G  AY  LK E GVHR+ R
Sbjct: 128 FAADLFRMYSQYAEKRGWKIDVMSANETGIGGFKEIIFEVRGRGAYSELKYESGVHRVQR 187

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P   + ++I+I+E D RID +R++G GGQ VNTTDSAVRI
Sbjct: 188 VPVTESGGRIHTSTATVAVLP-EAEEVDIQINEEDLRIDVFRSTGHGGQSVNTTDSAVRI 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311
           TH+PTG+VV CQ E+SQ KN+A+A  +LRA+LY+LE ++  E  +     ++++G G + 
Sbjct: 247 THLPTGLVVTCQDEKSQIKNRAKAMAVLRARLYDLEQRRLHEERSGM--RRSQVGTGERA 304

Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             IR+Y   P   V D R  +   +  ++L+G++D F++   A  +
Sbjct: 305 EKIRTYNF-PQDRVTDHRLKLSLGNLPEILNGEIDTFIRELRAADQ 349


>gi|16804581|ref|NP_466066.1| peptide chain release factor 1 [Listeria monocytogenes EGD-e]
 gi|224500713|ref|ZP_03669062.1| peptide chain release factor 1 [Listeria monocytogenes Finland
           1988]
 gi|224503217|ref|ZP_03671524.1| peptide chain release factor 1 [Listeria monocytogenes FSL R2-561]
 gi|255029752|ref|ZP_05301703.1| peptide chain release factor 1 [Listeria monocytogenes LO28]
 gi|20139329|sp|Q8Y4A8|RF1_LISMO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|16412031|emb|CAD00621.1| prf1 [Listeria monocytogenes EGD-e]
          Length = 358

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 103/347 (29%), Positives = 172/347 (49%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   LN    DP +  +    + L +E+  +   +   +E ++         EL
Sbjct: 5   LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQINETKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E+ D  + +   +    ++ E    +       +     D  +  LE+   AGG E+ 
Sbjct: 65  LGEKLDDEMREMAKEEFAELQKEKTDLEERLKLLLVPKDPNDDKNVILEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AE R +K E ++ +     G K    ++ G +A+  +K E G HR+ 
Sbjct: 125 LFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P   + +EIE+ + D R DT+ ++GAGGQ VNTT SAVR
Sbjct: 185 RVPETESGGRIHTSTATVAILP-EAEEVEIELHDKDIRTDTFASTGAGGQSVNTTMSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+    +RE       + K+ +G G  
Sbjct: 244 LTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKF--EREAREEYDANRKSAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +++G LD+ + A +   +
Sbjct: 302 SERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQ 347


>gi|308175429|ref|YP_003922134.1| peptide chain release factor 1 [Bacillus amyloliquefaciens DSM 7]
 gi|307608293|emb|CBI44664.1| peptide chain release factor 1 [Bacillus amyloliquefaciens DSM 7]
          Length = 356

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 114/351 (32%), Positives = 185/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           + D   +  QR   LN    DP +  +  + +   +E+  +   +   ++ +D   +L D
Sbjct: 1   MLDRLQSIEQRYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVEVYRQYRDASEQLTD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127
              +LE  L+ D   +++E    LQR    +  + +   +     D  +  +E+   AGG
Sbjct: 61  AKAMLEDKLDADMREMVKEEISELQRETETLSERLKVLLIPKDPNDDKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE +E       G K    +I G  AY  LK E G 
Sbjct: 121 EEAALFAGNLYRMYSRYAEVQGWKTEVMEASVTGTGGYKEIIFMITGKGAYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P   + +E++I E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLP-EAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K+ +G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKF--QQEAQAEYDQNRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+G LD+ ++A +   +
Sbjct: 298 SGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQ 347


>gi|297588165|ref|ZP_06946809.1| peptide chain release factor RF2 [Finegoldia magna ATCC 53516]
 gi|297574854|gb|EFH93574.1| peptide chain release factor RF2 [Finegoldia magna ATCC 53516]
          Length = 329

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 155/326 (47%), Positives = 219/326 (67%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             +T     W +  +A+ +  E   +   +    EI++++ +  ++LE++ E++     +
Sbjct: 2   QQETLKQGFWDDSDKAQAIFDELNSIKADVENYDEIEEKIEEVKMMLEISKEDNTEEYEK 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E S  L+ ++ +V+  + ++LL GE D N+A + +HAGAGGTE+QDWA MLLRMYTRW  
Sbjct: 62  EISKTLKSLEEKVDEFKIKTLLVGEYDKNNAIMSIHAGAGGTEAQDWAEMLLRMYTRWIA 121

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            +K+  +  + +   E GIKS +L+++G NAYG+LK E+GVHRLVRISP+D   RRHTSF
Sbjct: 122 DKKYSYKITDYNQDTEGGIKSVSLIVQGINAYGFLKSEKGVHRLVRISPFDQQKRRHTSF 181

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S+ V+P + DS  I+I + D ++DTYRASGAGGQHVN TDSAVRITHIPTGV VQCQ E
Sbjct: 182 ASVDVFPEIKDSHNIQIDDKDLKVDTYRASGAGGQHVNMTDSAVRITHIPTGVTVQCQTE 241

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQ  N+  A +ML AKL  ++ +++ E     +    +I WG QIRSYV QPY +VKD 
Sbjct: 242 RSQIANRKYAMDMLIAKLIMIKEEEKREKIEDIQGKYNQIAWGSQIRSYVFQPYTLVKDH 301

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLA 352
           RTN E +   DVLDGDLD F+ A L+
Sbjct: 302 RTNFESSQVQDVLDGDLDKFINAYLS 327


>gi|166154244|ref|YP_001654362.1| peptide chain release factor 1 [Chlamydia trachomatis 434/Bu]
 gi|166155119|ref|YP_001653374.1| peptide chain release factor 1 [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301335493|ref|ZP_07223737.1| peptide chain release factor 1 [Chlamydia trachomatis L2tet1]
 gi|238687434|sp|B0B9D0|RF1_CHLT2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238687452|sp|B0BB09|RF1_CHLTB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|165930232|emb|CAP03717.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis
           434/Bu]
 gi|165931107|emb|CAP06671.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 359

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 110/338 (32%), Positives = 173/338 (51%), Gaps = 11/338 (3%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI----QDRLCDNLILLELA 76
           +RL  +  +  DP+++ N  E   L +E   L    +  + +    +    D L L    
Sbjct: 10  KRLEEVEKQISDPNIFSNPKEYSSLSKEHARLSEIKNAHESLVATKKILQDDKLALSTEK 69

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
             E    + +      + ++   +  +   +     D     +E+ AG GG E+  +   
Sbjct: 70  DPEIVAMLEEGVLVGEEAVERLSKQLENLLIPPDPDDDLSVIMELRAGTGGDEAALFVGD 129

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
            +RMY  +A  + ++ E L   + +  G K   + I G +   +L+ E G HR+ R+   
Sbjct: 130 CVRMYHLYAASKGWQCEVLSASESDLGGYKEYVMGISGASVKRFLQYEAGTHRVQRVPET 189

Query: 197 DSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           ++  R HTS  ++ V P   +D  E+ I E D RIDT+R+SGAGGQHVN TDSAVRITHI
Sbjct: 190 ETQGRVHTSAVTVAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSAVRITHI 249

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           P+GVVV CQ ERSQHKNKA+A  +L+A++ + E+QKR + A+   S   ++G G    +I
Sbjct: 250 PSGVVVTCQDERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRS--AQVGSGDRSERI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           R+Y   P   V D R  +   +   V++G+LD    A 
Sbjct: 308 RTYNF-PQNRVTDHRIGLTLYNLDRVMEGELDMITTAL 344


>gi|223983553|ref|ZP_03633736.1| hypothetical protein HOLDEFILI_01017 [Holdemania filiformis DSM
           12042]
 gi|223964481|gb|EEF68810.1| hypothetical protein HOLDEFILI_01017 [Holdemania filiformis DSM
           12042]
          Length = 359

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 103/346 (29%), Positives = 173/346 (50%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---LCDNLIL 72
             +  +R + +N +   P +  +      L +E+  L  ++   +E++     +     +
Sbjct: 8   LQSIEERYNEINEEMMSPEIVSDPKRLAKLGKEQASLKQSVEAYEELKSLNSHIEQAEEM 67

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +    E       E  + L + +  +   +   +     D +D  +E+   AGG E   
Sbjct: 68  AKEHDPELKEMAQMELEELLPKKEALIAKIEVLLIPKDPNDDHDCIVEIRGAAGGDEGNI 127

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY R+AE + +K + LE+ + E  G    + L+KG   Y  LK E G HR+ R
Sbjct: 128 FAGDLYRMYVRYAETQGWKIQVLEMSESEAGGFSMISFLVKGGEVYRQLKFESGAHRVQR 187

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P  +++    I  +D   +T+RASGAGGQH+N TDSAVRI
Sbjct: 188 VPKTETQGRIHTSTATVLVLPDAEEADIE-IDPADLTFETHRASGAGGQHINKTDSAVRI 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
            H+PTG+ V CQ+ RSQH+N+  A  ++RA++Y  E   R++    G   + +IG G   
Sbjct: 247 VHVPTGITVNCQEGRSQHENRETALRLIRARVY--EELTRQKEEEEGAVRRAKIGTGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R          +++G LDD + A LA ++
Sbjct: 305 EKIRTYNY-PQNRVTDHRIGFTINQLDRIMEGKLDDVIAALLAEEQ 349


>gi|21231300|ref|NP_637217.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66768648|ref|YP_243410.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|188991534|ref|YP_001903544.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|21112954|gb|AAM41141.1| putative peptide release factor 2 [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66573980|gb|AAY49390.1| putative peptide release factor 2 [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167733294|emb|CAP51493.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           campestris]
          Length = 313

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 164/302 (54%), Positives = 216/302 (71%), Gaps = 1/302 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L+  +  I ++   L D   LL+LA  E D         +L + +  VE  +F+ + SG+
Sbjct: 2   LEKTVIGIADVLAGLTDAGELLDLAESEQDEDTAVAVIADLDKYQAHVEKLEFQRMFSGQ 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D  +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE +E+  GE AGIKSAT+ 
Sbjct: 62  MDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTELMEVSGGEVAGIKSATIR 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I+G  AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P VDD+IEI+I+ +D R D
Sbjct: 122 IEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDNIEIDINPADLRTD 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            YR+SGAGGQHVN T+SAVRITHIPT  VV CQ  RSQH+N+  A  ML AKLYELE+QK
Sbjct: 182 VYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRDNAMKMLAAKLYELEVQK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R    +  E++K++IGWG QIR+YVL     +KDLRT IE++    VLDGDLD+F++A+L
Sbjct: 242 RNVERDALEATKSDIGWGSQIRNYVLD-QSRIKDLRTGIERSDTQKVLDGDLDEFVEASL 300

Query: 352 AI 353
             
Sbjct: 301 KA 302


>gi|299135937|ref|ZP_07029121.1| peptide chain release factor 1 [Acidobacterium sp. MP5ACTX8]
 gi|298602061|gb|EFI58215.1| peptide chain release factor 1 [Acidobacterium sp. MP5ACTX8]
          Length = 356

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 105/347 (30%), Positives = 177/347 (51%), Gaps = 11/347 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   L  +  DP L  +  + + + ++ + L+  +   +E +        
Sbjct: 1   MFDRLDQIEERYEDLGRQLGDPTLVSDQKKFQTVAKQHRDLEPTVDKFREYRKLRDGVAE 60

Query: 72  LLELALEED-DCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGT 128
              +  E D +   + E        KL    ++ + L       D  +  +E+ AG GG 
Sbjct: 61  AKAMLTESDAEMRAMAEDELLTLEPKLATTEEELKVLLLPKDPNDDKNVIVELRAGTGGD 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +   + RMY R+AE+ K+K E L   D +  G+K  T + +G   Y  +K E GVH
Sbjct: 121 EASLFVAEVFRMYLRFAEQHKWKVEVLSQTDSDVGGLKDVTAIFEGDKVYSQMKYESGVH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS  ++ V P   + +++++   D RIDT+ +SG GGQ VNTT S
Sbjct: 181 RVQRVPATETQGRVHTSAITVAVLP-EAEEVDVKVEAKDLRIDTFCSSGPGGQSVNTTYS 239

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           A+RITH+PT  VV CQ E+SQ KN+ +A  +LRA+LYE+E ++  ++    +  K ++G 
Sbjct: 240 AIRITHLPTNTVVSCQDEKSQIKNREKAMRVLRARLYEVEAERVHQLQ--AKERKQQVGT 297

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           G    +IR+Y   P   + D R  +     + V++G L   + A +A
Sbjct: 298 GDRSEKIRTYNF-PQNRLTDHRIGLTNHQLAMVMEGLLQPTVDALIA 343


>gi|206895451|ref|YP_002247173.1| peptide chain release factor 1 [Coprothermobacter proteolyticus DSM
           5265]
 gi|206738068|gb|ACI17146.1| peptide chain release factor 1 [Coprothermobacter proteolyticus DSM
           5265]
          Length = 360

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 117/345 (33%), Positives = 180/345 (52%), Gaps = 11/345 (3%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              +R   L    E+P +  +  +   LMRE+  LD  I  I + +  + D      +  
Sbjct: 9   AMEERYESLVRDLENPEIASDPEQLMKLMREKSQLDPIIEKIADYRKLIRDIESAKAILE 68

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLL----SGEADSNDAYLEVHAGAGGTESQDW 133
           E  +  + +   + L+ ++  +  K+ E  L        D     +E+ AG GG E+  +
Sbjct: 69  EPGEDELKELAEEELRNLEDILPQKEKELKLLLVEPDPMDEKPVIVEIRAGVGGEEAALF 128

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMYTR+AE++ +K E ++ +  +  G K     ++G   Y  LK E GVHR+ R+
Sbjct: 129 AGDLFRMYTRYAERKGWKVELVDSNPTDLGGFKEVVFSVEGDRVYSRLKYESGVHRVQRV 188

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S+ R HTS +++ V P   D +EIEI+E D  IDT+RA G GGQ+V   ++AVRI 
Sbjct: 189 PETESSGRIHTSTATVAVLP-EVDEVEIEINEEDLEIDTFRAGGHGGQNVQKNETAVRIK 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WGR 310
           H PTG+VV CQ ERSQ +NK +A  +LRAKLYE +L++R+   ++    ++ IG    G 
Sbjct: 248 HKPTGIVVTCQDERSQLQNKMKALKVLRAKLYERQLEERQ--KSMSSFRRSLIGSAERGE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y       V D R N         LDGDLD+ + A     +
Sbjct: 306 KIRTYNFM-QNRVTDHRINYTIYYLDRFLDGDLDEMIDALETADR 349


>gi|323463876|gb|ADX76029.1| peptide chain release factor 1 [Staphylococcus pseudintermedius
           ED99]
          Length = 358

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 114/351 (32%), Positives = 180/351 (51%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +    +   +E+  L   +   ++ +    D   
Sbjct: 1   MFDQLDIVEERYEQLNELLSDPEVVSDSNLLRKYSKEQSELQKTVEVYRQYKQVKEDAEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGG 127
           +  +  E D+   ++   +    +K EV       +   +     D  D  +E+   AGG
Sbjct: 61  IELMLAETDEADEVEMLKEEASALKAEVPELEEQLKLLLIPKDPNDEKDVIVEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+++AE  +FK E +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLFRMYSKFAESHRFKLEIVEATESDHGGYKEISFSVSGDGAYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTGV+     E+SQ +N+ +A  +L+A+LY+++LQ  EE        K+ +G
Sbjct: 240 SAVRITHIPTGVIATSS-EKSQIQNREKAMKVLKARLYDMKLQ--EEQQKYAAQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G LD+ + A    ++
Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIVDALTMHEQ 346


>gi|46908715|ref|YP_015104.1| peptide chain release factor 1 [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47093870|ref|ZP_00231612.1| peptide chain release factor 1 [Listeria monocytogenes str. 4b
           H7858]
 gi|217963353|ref|YP_002349031.1| peptide chain release factor 1 [Listeria monocytogenes HCC23]
 gi|226225091|ref|YP_002759198.1| peptide chain release factor 1 [Listeria monocytogenes Clip81459]
 gi|254825334|ref|ZP_05230335.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-194]
 gi|254828119|ref|ZP_05232806.1| peptide chain release factor 1 [Listeria monocytogenes FSL N3-165]
 gi|254831034|ref|ZP_05235689.1| peptide chain release factor 1 [Listeria monocytogenes 10403S]
 gi|254853928|ref|ZP_05243276.1| peptide chain release factor 1 [Listeria monocytogenes FSL R2-503]
 gi|254900318|ref|ZP_05260242.1| peptide chain release factor 1 [Listeria monocytogenes J0161]
 gi|254913443|ref|ZP_05263455.1| peptide chain release factor 1 [Listeria monocytogenes J2818]
 gi|254932215|ref|ZP_05265574.1| peptide chain release factor 1 [Listeria monocytogenes HPB2262]
 gi|254937824|ref|ZP_05269521.1| peptide chain release factor 1 [Listeria monocytogenes F6900]
 gi|254993429|ref|ZP_05275619.1| peptide chain release factor 1 [Listeria monocytogenes FSL J2-064]
 gi|255026493|ref|ZP_05298479.1| peptide chain release factor 1 [Listeria monocytogenes FSL J2-003]
 gi|255519761|ref|ZP_05386998.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-175]
 gi|284802981|ref|YP_003414846.1| peptide chain release factor 1 [Listeria monocytogenes 08-5578]
 gi|284996122|ref|YP_003417890.1| peptide chain release factor 1 [Listeria monocytogenes 08-5923]
 gi|290892706|ref|ZP_06555698.1| peptide chain release factor 1 [Listeria monocytogenes FSL J2-071]
 gi|300764957|ref|ZP_07074945.1| peptide chain release factor 1 [Listeria monocytogenes FSL N1-017]
 gi|61214637|sp|Q71WN5|RF1_LISMF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790886|sp|B8DBG6|RF1_LISMH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|259585225|sp|C1KYW0|RF1_LISMC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|46881987|gb|AAT05281.1| peptide chain release factor 1 [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47017744|gb|EAL08535.1| peptide chain release factor 1 [Listeria monocytogenes str. 4b
           H7858]
 gi|217332623|gb|ACK38417.1| peptide chain release factor 1 [Listeria monocytogenes HCC23]
 gi|225877553|emb|CAS06267.1| Putative peptide chain release factor 1 [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
 gi|258600504|gb|EEW13829.1| peptide chain release factor 1 [Listeria monocytogenes FSL N3-165]
 gi|258607316|gb|EEW19924.1| peptide chain release factor 1 [Listeria monocytogenes FSL R2-503]
 gi|258610428|gb|EEW23036.1| peptide chain release factor 1 [Listeria monocytogenes F6900]
 gi|284058543|gb|ADB69484.1| peptide chain release factor 1 [Listeria monocytogenes 08-5578]
 gi|284061589|gb|ADB72528.1| peptide chain release factor 1 [Listeria monocytogenes 08-5923]
 gi|290557766|gb|EFD91288.1| peptide chain release factor 1 [Listeria monocytogenes FSL J2-071]
 gi|293583770|gb|EFF95802.1| peptide chain release factor 1 [Listeria monocytogenes HPB2262]
 gi|293591450|gb|EFF99784.1| peptide chain release factor 1 [Listeria monocytogenes J2818]
 gi|293594577|gb|EFG02338.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-194]
 gi|300514257|gb|EFK41316.1| peptide chain release factor 1 [Listeria monocytogenes FSL N1-017]
 gi|307572070|emb|CAR85249.1| peptide chain release factor 1 [Listeria monocytogenes L99]
 gi|332312973|gb|EGJ26068.1| Peptide chain release factor 1 [Listeria monocytogenes str. Scott
           A]
          Length = 358

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 103/347 (29%), Positives = 172/347 (49%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   LN    DP +  +    + L +E+  +   +   +E ++         EL
Sbjct: 5   LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQINETKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E+ D  + +   +    ++ E    +       +     D  +  LE+   AGG E+ 
Sbjct: 65  LGEKLDDEMREMAKEEFAELQKEKADLEERLKLLLVPKDPNDDKNVILEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AE R +K E ++ +     G K    ++ G +A+  +K E G HR+ 
Sbjct: 125 LFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P   + +EIE+ + D R DT+ ++GAGGQ VNTT SAVR
Sbjct: 185 RVPETESGGRIHTSTATVAILP-EAEEVEIELHDKDIRTDTFASTGAGGQSVNTTMSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+    +RE       + K+ +G G  
Sbjct: 244 LTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKF--EREAREEYDANRKSAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +++G LD+ + A +   +
Sbjct: 302 SERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQ 347


>gi|283478591|emb|CAY74507.1| Peptide chain release factor 1 (RF-1) [Erwinia pyrifoliae DSM
           12163]
          Length = 363

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 111/337 (32%), Positives = 174/337 (51%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     ++ Q    D      +
Sbjct: 12  LEALQERHEEVEALLGDAGVIADQERFRALSREYAQLTDVSRCFRQWQQCQEDMATAEMM 71

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   +  +E            +  Q   L     D  + YLEV AG GG E+  +A
Sbjct: 72  LGDAEMREMAQEELQAARAASDELQQQLQVLLLPKDPDDERNCYLEVRAGTGGDEAAIFA 131

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R++K E +  ++GE  G K     + G  AYG LK E G HR+ R+ 
Sbjct: 132 GDLFRMYSRYAEYRRWKVEVMSANEGEHGGYKEVIAKVIGEGAYGRLKFESGGHRVQRVP 191

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +I+ SD +IDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 192 ETESQGRIHTSACTVAVMPELPEAELPDINPSDLKIDTFRSSGAGGQHVNTTDSAIRITH 251

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A  +L +++   E+ +R++      + +  +G G    +
Sbjct: 252 LPTGIVVECQDERSQHKNKAKALGVLGSRIRAAEMARRQQE--ESSTRRNLLGSGDRSDR 309

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      + ++G LD  ++
Sbjct: 310 NRTYNF-PQGRVTDHRINLTIYRLDEAMEGKLDALIE 345


>gi|260779385|ref|ZP_05888277.1| peptide chain release factor 1 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260605549|gb|EEX31844.1| peptide chain release factor 1 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 362

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 113/346 (32%), Positives = 184/346 (53%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  +  + + L +E   L+      +  Q    D +   E+
Sbjct: 9   LETLVERYEEVQHLLGDPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQEDLVAAEEM 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           A E+D         +     + I+   +  Q   L     D  + +LE+ AGAGG E+  
Sbjct: 69  AKEDDAEMREMAQEEIKEAQETIERLNDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AEK+ ++ E +  ++ E  G K     + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSKFAEKKGWRVEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ +   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RI
Sbjct: 189 VPATESQGRVHTSACTVAIMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311
           TH+PTG VV+CQ ERSQHKNKA+A ++L A++  ++ ++ +  A   ++ +  +G G + 
Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMSVLAARI--IQAEEAKRAAEESDTRRNLLGSGDRS 306

Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             IR+Y   P   V D R N+     ++V++GDL   +   +   +
Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTIYRLNEVMEGDLASLVDPVIQEHQ 351


>gi|322383119|ref|ZP_08056946.1| peptide chain release factor 1-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
 gi|321152781|gb|EFX45407.1| peptide chain release factor 1-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
          Length = 356

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 117/351 (33%), Positives = 180/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D       R   L+    DP +  +  + +   +E+  L  A     E +  L     
Sbjct: 1   MLDRLQALADRYEKLSELLCDPDVTSDTKKLREYSKEQSGLQEAYDTYMEYKQVLGQLEA 60

Query: 72  LLELALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +  E+ D  + +     ++    R +   E  +   L     D+ +  +EV   AGG
Sbjct: 61  AKAMQKEKLDDEMSELVKMEIEELSGRKEELEERLKILMLPKDPNDNKNVIVEVRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE L+ +  +  G K  T +IKG  AY  LK E G 
Sbjct: 121 DEAALFAADLYRMYSRYAESQGWKTEVLDANLNDLGGFKEITFMIKGNGAYSKLKYESGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS S++ V P   + I+IEI +SD R+DT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRIPVTESGGRIHTSTSTVAVMP-EMEDIDIEIKDSDIRVDTFCSSGAGGQSVNTTK 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+V  CQ  +SQ+ NKA+A  +LRA++Y+    ++EE A      K+++G
Sbjct: 240 SAVRVTHVPTGIVATCQDGKSQNDNKAKALQVLRARIYD--QVRQEEEAKYAGERKSKVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L GDL++ + A     +
Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTLHKLDSILGGDLEEIITALTMAAQ 347


>gi|59711375|ref|YP_204151.1| peptide chain release factor 1 [Vibrio fischeri ES114]
 gi|197334513|ref|YP_002155529.1| peptide chain release factor 1 [Vibrio fischeri MJ11]
 gi|75431754|sp|Q5E6T3|RF1_VIBF1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238690273|sp|B5FBX0|RF1_VIBFM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|59479476|gb|AAW85263.1| peptide chain release factor RF-1 [Vibrio fischeri ES114]
 gi|197316003|gb|ACH65450.1| peptide chain release factor 1 [Vibrio fischeri MJ11]
          Length = 362

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 114/339 (33%), Positives = 181/339 (53%), Gaps = 9/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  +  + + L RE   L+      +  +    D +   E+
Sbjct: 9   LETLVERYEEVQHLLGDPDVIGDQNKFRALSREYSQLEEVTQCFQAYEQAQEDLVAAQEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           A E+D+        +     +         Q   L     D  + +LE+ AGAGG E+  
Sbjct: 69  AQEDDEEMREMAQEEIKDAKEAIERLTDELQVLLLPKDPNDERNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AEK+ ++ E +  ++ E  G K     + G  AYG LK E G HR+ R
Sbjct: 129 FAGNLFRMYSRFAEKKGWRVEVMSSNEAEHGGYKEMIAKVSGEGAYGVLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RI
Sbjct: 189 VPETESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG VV+CQ ERSQHKNKA+A ++L A++  ++ ++    A + ++ +  +G G   
Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMSVLAARI--IQAEEARRAAAVSDTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +IR+Y   P   V D R N+     ++V++GDL   ++
Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTVYRLNEVMEGDLGCLIE 344


>gi|88706910|ref|ZP_01104609.1| peptide chain release factor 2 [Congregibacter litoralis KT71]
 gi|88698832|gb|EAQ95952.1| peptide chain release factor 2 [Congregibacter litoralis KT71]
          Length = 299

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 161/297 (54%), Positives = 215/297 (72%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +S I  +     D L L+E+A EEDD + + E    +Q +   +E  +F  + +GE D N
Sbjct: 1   MSSIDALDTGASDTLDLIEMAAEEDDEAAVAELEQEIQGLLKVLEKLEFRRMFNGEMDPN 60

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +A+L++ +G+GGTE+QDWA +LLRMY RW E + F TE +E   G+ AGIKSAT+   G 
Sbjct: 61  NAFLDIQSGSGGTEAQDWAEILLRMYLRWGEAKGFSTELIEASGGDVAGIKSATIKFTGE 120

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+GWL+ E GVHRLVR SP+DS +RRHTSF+S++V P +DD+IEIEI+ +D R+DTYRA
Sbjct: 121 YAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVAPEIDDNIEIEINPADLRVDTYRA 180

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN TDSAVR+TH P+G+VVQCQ ERSQH+N+  A  +LR KLYE+E+ KR E 
Sbjct: 181 SGAGGQHVNKTDSAVRLTHNPSGIVVQCQTERSQHQNRDNAMKLLRGKLYEMEILKRNEE 240

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             I E +K +IGWG QIRSYVL     +KDLRTN+E ++   VLDGD+D F++A+L 
Sbjct: 241 KQIMEDNKADIGWGSQIRSYVLD-ASRIKDLRTNVETSNTQAVLDGDIDQFIEASLK 296


>gi|21282445|ref|NP_645533.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|88194533|ref|YP_499328.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|161509023|ref|YP_001574682.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|21203882|dbj|BAB94581.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|87202091|gb|ABD29901.1| peptide chain release factor 2, putative [Staphylococcus aureus
           subsp. aureus NCTC 8325]
 gi|160367832|gb|ABX28803.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
          Length = 291

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 151/286 (52%), Positives = 196/286 (68%), Gaps = 1/286 (0%)

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
                +L  EE D  + ++    +   K +V+  + + LL G  D+N+A LE+H GAGGT
Sbjct: 1   MDATWDLLQEEFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGT 60

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ESQDWANML RMY R+ EK+ FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVH
Sbjct: 61  ESQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVH 120

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           RLVRISP+DS+ RRHTSF+S  V P   +D IEIEI+  D  +DT+RASGAGGQH+N T+
Sbjct: 121 RLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTE 180

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SA+RITH P+G+VV  Q ERSQ KN+  A  ML++KLY+L+L+++          + EIG
Sbjct: 181 SAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIG 240

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           WG QIRSYV  PY MVKD RTN E      V+DGD+  F+++ L  
Sbjct: 241 WGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLRQ 286


>gi|327253901|gb|EGE65530.1| peptide chain release factor 1 [Escherichia coli STEC_7v]
          Length = 360

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 179/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     +     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGEAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+      ++ +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            R+Y   P   V D R N+      +V++G LD  ++  +   +
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 349


>gi|258422882|ref|ZP_05685782.1| peptide chain release factor 1 [Staphylococcus aureus A9635]
 gi|257846906|gb|EEV70920.1| peptide chain release factor 1 [Staphylococcus aureus A9635]
          Length = 358

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 114/351 (32%), Positives = 185/351 (52%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +   +  + +  +   
Sbjct: 1   MFDQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKAKKEELAD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
           + E+  E DD   ++   +    IK E+   +       +     D  D  +E+ A AGG
Sbjct: 61  IEEMLSETDDKEEVEMLKEESSGIKAELPNIEEELKILLIPKDPNDDKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L+RMY+++AE + FKTE +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTGV+     E+SQ +N+ +A  +L+A+LY++++Q  EE        K+ +G
Sbjct: 240 SAVRITHLPTGVIATSS-EKSQIQNREKAMKVLKARLYDMKVQ--EEQQKYASQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G L++ + A    ++
Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGHLEEIIDALTLSEQ 346


>gi|89054297|ref|YP_509748.1| peptide chain release factor 1 [Jannaschia sp. CCS1]
 gi|119361551|sp|Q28RD9|RF1_JANSC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|88863846|gb|ABD54723.1| bacterial peptide chain release factor 1 (bRF-1) [Jannaschia sp.
           CCS1]
          Length = 354

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 118/344 (34%), Positives = 176/344 (51%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R  +L  +        +  +   + RE   L   ++ I   +  L D      +
Sbjct: 10  LRQITDRFEYLEAQLNGG---PDPSDIAKISREYAELKPVVAEIAGYEQLLADMAEAQNM 66

Query: 76  ALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E        I    +  Q   L    AD+  A +E+  G GG E+  +A
Sbjct: 67  LADPDMRPLAEEELPRLEAAIPAAEQSLQLALLPKDAADAKPAMIEIRPGTGGDEAALFA 126

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE R ++ E +++ + +  GIK  T  ++G N +  LK E GVHR+ R+ 
Sbjct: 127 GDLLRMYTRYAEARGWRLEIVDLQESDLGGIKECTARVEGENVFARLKFESGVHRVQRVP 186

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++I+I  +D RIDT RASGAGGQHVNTTDSAVRITH
Sbjct: 187 ETESGGRIHTSAATVAVLP-EAEDVDIDIPATDIRIDTMRASGAGGQHVNTTDSAVRITH 245

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +P+G+VV    E+SQH+N+  A   LR +LY+LE QK      +    K +IG G    +
Sbjct: 246 VPSGIVV-VSSEKSQHRNREIAMQTLRTRLYDLERQK--ADDAMAADRKAQIGSGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       V+ GDLD+ + A  A  +
Sbjct: 303 IRTYNF-PQGRMTDHRINLTLYKLDAVMLGDLDEIVDALTAEDQ 345


>gi|15604741|ref|NP_219525.1| peptide chain release factor 1 [Chlamydia trachomatis D/UW-3/CX]
 gi|76788735|ref|YP_327821.1| peptide chain release factor 1 [Chlamydia trachomatis A/HAR-13]
 gi|237804372|ref|YP_002888526.1| peptide chain release factor 1 [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255310824|ref|ZP_05353394.1| peptide chain release factor 1 [Chlamydia trachomatis 6276]
 gi|255317124|ref|ZP_05358370.1| peptide chain release factor 1 [Chlamydia trachomatis 6276s]
 gi|7388050|sp|O84026|RF1_CHLTR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361522|sp|Q3KMZ9|RF1_CHLTA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|3328413|gb|AAC67613.1| Peptide Chain Releasing Factor (RF-1) [Chlamydia trachomatis
           D/UW-3/CX]
 gi|76167265|gb|AAX50273.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis
           A/HAR-13]
 gi|231272672|emb|CAX09575.1| bacterial peptide chain release factor 1 [Chlamydia trachomatis
           B/TZ1A828/OT]
 gi|296435539|gb|ADH17713.1| peptide chain release factor 1 [Chlamydia trachomatis G/9768]
 gi|296436463|gb|ADH18633.1| peptide chain release factor 1 [Chlamydia trachomatis G/11222]
 gi|296437399|gb|ADH19560.1| peptide chain release factor 1 [Chlamydia trachomatis G/11074]
 gi|297139898|gb|ADH96656.1| peptide chain release factor 1 [Chlamydia trachomatis G/9301]
 gi|297748154|gb|ADI50700.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Chlamydia
           trachomatis D-EC]
 gi|297749034|gb|ADI51712.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Chlamydia
           trachomatis D-LC]
          Length = 359

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 110/338 (32%), Positives = 173/338 (51%), Gaps = 11/338 (3%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI----QDRLCDNLILLELA 76
           +RL  +  +  DP+++ N  E   L +E   L    +  + +    +    D L L    
Sbjct: 10  KRLEEVEKQISDPNIFSNPKEYSSLSKEHARLSEIKNAHESLVATKKILQDDKLALSTEK 69

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
             E    + +      + ++   +  +   +     D     +E+ AG GG E+  +   
Sbjct: 70  DPEIVAMLEEGVLVGEEAVERLSKQLENLLIPPDPDDDLSVIMELRAGTGGDEAALFVGD 129

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
            +RMY  +A  + ++ E L   + +  G K   + I G +   +L+ E G HR+ R+   
Sbjct: 130 CVRMYHLYAASKGWQCEVLSTSESDLGGYKEYVMGISGASVKRFLQYEAGTHRVQRVPET 189

Query: 197 DSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           ++  R HTS  ++ V P   +D  E+ I E D RIDT+R+SGAGGQHVN TDSAVRITHI
Sbjct: 190 ETQGRVHTSAVTVAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSAVRITHI 249

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           P+GVVV CQ ERSQHKNKA+A  +L+A++ + E+QKR + A+   S   ++G G    +I
Sbjct: 250 PSGVVVTCQDERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRS--AQVGSGDRSERI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           R+Y   P   V D R  +   +   V++G+LD    A 
Sbjct: 308 RTYNF-PQNRVTDHRIGLTLYNLDRVMEGELDMITTAL 344


>gi|254302818|ref|ZP_04970176.1| peptide chain release factor RF1 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148323010|gb|EDK88260.1| peptide chain release factor RF1 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 357

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 120/351 (34%), Positives = 182/351 (51%), Gaps = 11/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +  V R   LN     P +  +  +     +    +   +   KE +  + D   
Sbjct: 1   MFDKLEEVVTRYDELNKMLVSPEVLADSKKMIECNKAINEITEIVEKYKEYKKYVDDIEF 60

Query: 72  LLELALEEDDCSILQE----TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + E    E D  + +       +  +++    E  +   L   + D  +  +E+  GAGG
Sbjct: 61  IKESFKTEKDSEMKEMLNEELKEAEEKLPKLEEELKILLLPKDKNDDKNVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE++K+K E +E  DGE  GIK     I G  AY  LK E GV
Sbjct: 121 DEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELGGIKEIAFTIIGLGAYSRLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +++ R HTS +++ V P V+D  E+ +   D +IDTYR+ GAGGQHVN TD
Sbjct: 181 HRVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVTVDPKDLKIDTYRSGGAGGQHVNMTD 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VVQCQ ERSQ KN+ +A   L  KLYE+E +K+          + ++G
Sbjct: 241 SAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQRSEVE--SERRLQVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   + D R  +        LDGD+D+ + A +   +
Sbjct: 299 TGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQ 348


>gi|237731780|ref|ZP_04562261.1| peptide chain release factor 1 [Citrobacter sp. 30_2]
 gi|226907319|gb|EEH93237.1| peptide chain release factor 1 [Citrobacter sp. 30_2]
          Length = 360

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 113/337 (33%), Positives = 174/337 (51%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGTIADQDRFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+     +    ++E   Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQDELREAKEKCEQLEQHLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESRRWRVEIMSASEGEHGGFKEVIAKISGEGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ +R++        +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVARRQQ--AEASERRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      + ++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLDMLIE 342


>gi|199597587|ref|ZP_03211016.1| Protein chain release factor A [Lactobacillus rhamnosus HN001]
 gi|258508166|ref|YP_003170917.1| peptide chain release factor 1 [Lactobacillus rhamnosus GG]
 gi|258539381|ref|YP_003173880.1| peptide chain release factor 1 [Lactobacillus rhamnosus Lc 705]
 gi|199591610|gb|EDY99687.1| Protein chain release factor A [Lactobacillus rhamnosus HN001]
 gi|257148093|emb|CAR87066.1| Peptide chain release factor 1 [Lactobacillus rhamnosus GG]
 gi|257151057|emb|CAR90029.1| Peptide chain release factor 1 [Lactobacillus rhamnosus Lc 705]
 gi|259649483|dbj|BAI41645.1| peptide chain release factor [Lactobacillus rhamnosus GG]
          Length = 359

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 108/352 (30%), Positives = 178/352 (50%), Gaps = 12/352 (3%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            +F+  D  + R   L     DP +  +      L +E   + + ++  K+ +  L D  
Sbjct: 3   KIFEQLDGLLVRYEELEELMSDPEVISDTKRYLALSKEEGGMRDVVAAYKKYKQVLSDIK 62

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAG 126
              E+  E  D  +     ++L+ ++ +    +       L     D  +  +E+   AG
Sbjct: 63  ESEEVLRESKDEDMEALAKEDLEDLQKQKADLEEKIKVLMLPKDPNDDKNIIMEIRGAAG 122

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  LL MY  +AE++ +K E ++    E  G K   ++I G N Y  LK E G
Sbjct: 123 GDEASLFAGDLLNMYMHYAERQGWKAEIVDSTPTEVGGYKEVVVMITGDNVYSKLKYENG 182

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P   D ++++I   D R D YR+SGAGGQHVN T
Sbjct: 183 AHRVQRVPVTESAGRVHTSTATVGVMP-EYDEVDLKIDPKDIRTDVYRSSGAGGQHVNKT 241

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+THIPTG+VV  Q ERSQ +N+A+A  +LR+++Y+    + +E     ++ K  I
Sbjct: 242 SSAVRMTHIPTGIVVSMQDERSQQENRARAMQILRSRVYDYYETENQE--KYDQNRKNAI 299

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       +++G+LD+ + A +   +
Sbjct: 300 GTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIVHDQ 350


>gi|328885059|emb|CCA58298.1| Peptide chain release factor 1 [Streptomyces venezuelae ATCC 10712]
          Length = 358

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 117/350 (33%), Positives = 172/350 (49%), Gaps = 16/350 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +  V   + L  K  DP +  +   A+ L +    L   ++  +  +    D   
Sbjct: 1   MFEAVEELVGEHADLEKKLADPSVHADQANARKLNKRYAELTPIVATYRAWKQTGDDIET 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EL    DD     E     +      E  +   +    +D  D  LE+ AGAGG ES 
Sbjct: 61  AREL--AHDDPDFAAEVKQLEKDRDELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG----------PNAYGWL 181
            +A  LLRMY R+AE+  +KTE ++  + E  G K   + +K              +  L
Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVAVKTKGGNGATEPGQGVWARL 178

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   +S  R HTS + + V P   + +E+EI  +D RID YR+SG GGQ
Sbjct: 179 KYEGGVHRVQRVPATESAGRIHTSAAGVLVTP-EAEEVEVEIHANDLRIDVYRSSGPGGQ 237

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTG+V  CQ E+SQ +NK QA  +LR++L     ++ E  A     
Sbjct: 238 SVNTTDSAVRITHLPTGIVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAESKAADARR 297

Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           S+   +    +IR+Y   P   + D R   +  +   VLDGDLD  ++A 
Sbjct: 298 SQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLDAMIQAC 346


>gi|296505754|ref|YP_003667454.1| peptide chain release factor 1 [Bacillus thuringiensis BMB171]
 gi|46576766|sp|Q812I4|RF1_BACCR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|296326806|gb|ADH09734.1| peptide chain release factor 1 [Bacillus thuringiensis BMB171]
          Length = 355

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 117/351 (33%), Positives = 181/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           + D       R   LN    DP +  +  + +   +E+  +   +   +E +D   +L D
Sbjct: 1   MLDRLQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQLKD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127
              +LE  L+ +   +++E    L+     +  + +   +     D  +  +EV   AGG
Sbjct: 61  AKAMLEDKLDAEMREMVKEEVSELESQDKTLSERLKILLVPKDPNDDKNVIVEVRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E G 
Sbjct: 121 DEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K  +G
Sbjct: 240 SAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 347


>gi|205375314|ref|ZP_03228104.1| peptide chain release factor 1 [Bacillus coahuilensis m4-4]
          Length = 356

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 105/351 (29%), Positives = 175/351 (49%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD       R   LN    DP +  +  + +   +E+      +   +E +D       
Sbjct: 1   MFDRLQAVEDRYDKLNELLSDPEVVSDPKKLREYSKEQSGHQATVEAYREYKDAKEQYND 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             ++  ++ D  + +   + +  ++ ++E  +       +     D  +  +EV   AGG
Sbjct: 61  AKQMLEDKLDPEMREMVKEEISELEEQIESLEERMKILLIPKDPNDDKNVIMEVRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE +E       G K    +I G  A+  +K E G 
Sbjct: 121 EEAALFAGTLYRMYSRFAEMQGWKTEVIESSPTGLGGYKEIIFMINGNGAFSKMKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P   + +EIEI + D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLP-EAEEVEIEIHDKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG VV CQ E+SQ KNK +A  +LRA++Y+    ++E  A      K+ +G
Sbjct: 240 SAVRLTHLPTGTVVSCQDEKSQIKNKEKAMKVLRARVYDKF--QQEAQAEYDAQRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L+G +D+ + A +   +
Sbjct: 298 SGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKMDEVIDALILEDQ 347


>gi|49484342|ref|YP_041566.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|82751719|ref|YP_417460.1| peptide chain release factor 1 [Staphylococcus aureus RF122]
 gi|257426257|ref|ZP_05602672.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428915|ref|ZP_05605309.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257431524|ref|ZP_05607897.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257434233|ref|ZP_05610583.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257437146|ref|ZP_05613186.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M876]
 gi|282904787|ref|ZP_06312661.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           C160]
 gi|282906462|ref|ZP_06314313.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282909431|ref|ZP_06317246.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911683|ref|ZP_06319482.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914967|ref|ZP_06322747.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M899]
 gi|282917467|ref|ZP_06325220.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           D139]
 gi|282920296|ref|ZP_06328020.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           C427]
 gi|282925507|ref|ZP_06333161.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           C101]
 gi|283771286|ref|ZP_06344175.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           H19]
 gi|283958898|ref|ZP_06376343.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293509035|ref|ZP_06667822.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510950|ref|ZP_06669649.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M809]
 gi|293547552|ref|ZP_06672227.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M1015]
 gi|295428705|ref|ZP_06821331.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297589815|ref|ZP_06948455.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus MN8]
 gi|56749405|sp|Q6GEV7|RF1_STAAR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361615|sp|Q2YUN5|RF1_STAAB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|49242471|emb|CAG41187.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|82657250|emb|CAI81691.1| peptide chain release factor 1 [Staphylococcus aureus RF122]
 gi|257270962|gb|EEV03135.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257274257|gb|EEV05774.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257277765|gb|EEV08435.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257280872|gb|EEV11017.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257283539|gb|EEV13666.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M876]
 gi|282312908|gb|EFB43309.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           C101]
 gi|282316156|gb|EFB46537.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           C427]
 gi|282318669|gb|EFB49026.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           D139]
 gi|282321170|gb|EFB51501.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M899]
 gi|282324448|gb|EFB54761.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282326701|gb|EFB56999.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282330412|gb|EFB59930.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282594820|gb|EFB99797.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           C160]
 gi|283459491|gb|EFC06584.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           H19]
 gi|283789616|gb|EFC28439.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290919672|gb|EFD96745.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M1015]
 gi|291094739|gb|EFE25011.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466235|gb|EFF08762.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           M809]
 gi|295127375|gb|EFG57015.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297576943|gb|EFH95657.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus MN8]
 gi|298695392|gb|ADI98614.1| Peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           ED133]
 gi|302333764|gb|ADL23957.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus JKD6159]
 gi|312437464|gb|ADQ76535.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus TCH60]
 gi|315193283|gb|EFU23681.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           CGS00]
 gi|323439333|gb|EGA97057.1| peptide chain release factor 1 [Staphylococcus aureus O11]
 gi|323442458|gb|EGB00087.1| peptide chain release factor 1 [Staphylococcus aureus O46]
          Length = 358

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 114/351 (32%), Positives = 185/351 (52%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +   +  + +  +   
Sbjct: 1   MFDQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKAKKEELAD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
           + E+  E DD   ++   +    IK E+   +       +     D  D  +E+ A AGG
Sbjct: 61  IEEMLSETDDKEEVEMLKEESSGIKAELPNLEEELKILLIPKDPNDDKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L+RMY+++AE + FKTE +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTGV+     E+SQ +N+ +A  +L+A+LY++++Q  EE        K+ +G
Sbjct: 240 SAVRITHLPTGVIATSS-EKSQIQNREKAMKVLKARLYDMKVQ--EEQQKYASQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G L++ + A    ++
Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGHLEEIIDALTLSEQ 346


>gi|254509155|ref|ZP_05121254.1| peptide chain release factor 1 [Vibrio parahaemolyticus 16]
 gi|219547906|gb|EED24932.1| peptide chain release factor 1 [Vibrio parahaemolyticus 16]
          Length = 362

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 114/346 (32%), Positives = 184/346 (53%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  +  + + L +E   L+      +  Q    D +   E+
Sbjct: 9   LETLVERYEEVQHLLGDPDIIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQEDLVAAEEM 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           A E+D+        +     + I+   +  Q   L     D  + +LE+ AGAGG E+  
Sbjct: 69  AKEDDEEMREMAQEEIKEAKETIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AEK+ ++ E +  ++ E  G K     + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSKFAEKQGWRVEVMSSNESEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RI
Sbjct: 189 VPATESQGRVHTSACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311
           TH+PTG VV+CQ ERSQHKNKA+A  +L A++  ++ ++ +  A   ++ +  +G G + 
Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARI--IQAEEAKRAAEESDTRRNLLGSGDRS 306

Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             IR+Y   P   V D R N+     ++V++GDL   +   +   +
Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTIYRLNEVMEGDLASLVDPVIQEHQ 351


>gi|270261428|ref|ZP_06189701.1| peptide chain release factor 1 [Serratia odorifera 4Rx13]
 gi|270044912|gb|EFA18003.1| peptide chain release factor 1 [Serratia odorifera 4Rx13]
          Length = 361

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 112/337 (33%), Positives = 172/337 (51%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +       + L RE   L +      E +    D      +
Sbjct: 9   LEALQERHEEVQALLGDAGVIAEQDRFRALSREYSQLTDVSRCFLEWRQVQEDLATAEMM 68

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   +  +E        +   +  Q   L     D    +LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQEEMKQAKAATEELEQQLQVLLLPKDPDDERGIFLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +  ++GE  G K     + G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAETRRWRVEIMSANEGEHGGYKEVIAKVSGDGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P V ++   EI+  D +IDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVMPEVPEAELPEINAGDLKIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKRQQE--EASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      +V++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTIYRLDEVMEGKLDMLIQ 342


>gi|119505822|ref|ZP_01627888.1| peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2080]
 gi|119458320|gb|EAW39429.1| peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2080]
          Length = 362

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 113/346 (32%), Positives = 169/346 (48%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + V R   +     DP   ++    + L RE   LD  +      +    D     E+
Sbjct: 9   LASLVDRHEEVAALLGDPETAEDTNLFRELSREYSQLDEVVVAFTAYRTATADVEAAQEM 68

Query: 76  ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +     +         Q   L   + DSN+ YLE+ AG GG E+  
Sbjct: 69  LSDSDPELREMAADELAVSTELVAKIESDLQVLLLPRDKRDSNNVYLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AE + ++ E +    G+  G K     + G + Y +LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAESKGWRLETISDRAGDHGGFKEIISRVVGNDVYAYLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V    DD   I+I + D R+DT+R+SGAGGQHVNTTDSAVRI
Sbjct: 189 VPETESQGRIHTSACTVAVMAEPDDVEAIDIRKEDLRVDTFRSSGAGGQHVNTTDSAVRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTGVVV+CQ ERSQHKN+A+A ++L A+L      K    +      +  +G G   
Sbjct: 249 THLPTGVVVECQDERSQHKNRARAMSLLSARLLTAAEDK--AHSEQAAERRNLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+      +++ G LD  ++      +
Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYKLDEIVQGQLDALVQPLRTEHQ 351


>gi|30249865|ref|NP_841935.1| peptide chain release factor 1 [Nitrosomonas europaea ATCC 19718]
 gi|46576779|sp|Q82TH4|RF1_NITEU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|30180902|emb|CAD85824.1| prfA: peptide chain release factor 1 [Nitrosomonas europaea ATCC
           19718]
          Length = 359

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 118/351 (33%), Positives = 178/351 (50%), Gaps = 10/351 (2%)

Query: 11  GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            G+ D       RL  L+       +  ++   + L RER  ++      +  Q    D 
Sbjct: 3   KGIIDQLTRLSMRLGELDKLLSTEKITADLDNYRKLSRERAEIEPVTELYRTYQQVEQDL 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGG 127
               E++ +        E      R KL     +           D  + +LE+ AG GG
Sbjct: 63  ATAREMSSDP-QFRDFAEAEIEADRRKLTNIETEILRQLLPKDPNDERNIFLEIRAGTGG 121

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            ES  +A  L RMY+R+AE+  ++ E +  +  E  G K   + I G  AY  LK E G 
Sbjct: 122 DESALFAGDLFRMYSRYAEREGWQVEVVSQNPSEVGGYKEIIVRIIGHGAYSRLKFESGG 181

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS  ++ V P  D+  +I ++ +D RIDT+RASGAGGQH+N TD
Sbjct: 182 HRVQRVPATETQGRVHTSTCTVAVLPEADEIADITLNPADLRIDTFRASGAGGQHINKTD 241

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+V +CQ+ RSQHKNKAQA ++L A++  L+ Q R + A    + K+ +G
Sbjct: 242 SAVRITHLPTGIVAECQEGRSQHKNKAQAMSVLIARI--LDKQVRAQQAEQAATRKSLVG 299

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   + D R N+       ++DG+LD+   A  A  +
Sbjct: 300 SGERSERIRTYNF-PQGRITDHRINLTLYKIEQIIDGELDELCSALAAEHQ 349


>gi|229164277|ref|ZP_04292210.1| Peptide chain release factor 1 [Bacillus cereus R309803]
 gi|228619217|gb|EEK76110.1| Peptide chain release factor 1 [Bacillus cereus R309803]
          Length = 358

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 111/347 (31%), Positives = 172/347 (49%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   LN    DP +  +  + +   +E+  +   +   +E +D          +
Sbjct: 8   LQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQETVEVYREYKDVREQLKDAKAM 67

Query: 76  ALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             ++ D  + +   + +     + K      +   +     D  +  +EV   AGG E+ 
Sbjct: 68  LEDKLDAEMREMVKEEVSELEGQDKELSARLKILLVPKDPNDDKNVIVEVRGAAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E G HR+ 
Sbjct: 128 LFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VNTT SAVR
Sbjct: 188 RVPETESGGRIHTSTATVAVLP-EAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTMSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K  +G G  
Sbjct: 247 LTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 305 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350


>gi|327399685|ref|YP_004340554.1| peptide chain release factor 1 [Hippea maritima DSM 10411]
 gi|327182314|gb|AEA34495.1| Peptide chain release factor 1 [Hippea maritima DSM 10411]
          Length = 354

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 123/337 (36%), Positives = 187/337 (55%), Gaps = 8/337 (2%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
             ++ T+  DP++  ++   K L  E + L   +   KE ++ L       EL  +E+  
Sbjct: 13  YKYIETQLSDPNVVGDLDRYKSLSSEIKKLTPIVEKAKEYRNILRQIEENEELLEDEELK 72

Query: 83  SILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMY 141
            + +E   +L+       +  +   L   EAD  D  LE+ AG GG E+  +A  L RMY
Sbjct: 73  ELAKEELKHLKERLPELEQEIKLLLLPKDEADDRDVILEIRAGTGGEEAALFAADLFRMY 132

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
           +R+AE + FK E L     +  GIK     IKG  AY   K E G HR+ RI   +S  R
Sbjct: 133 SRYAENKGFKVEVLSKSLSDTGGIKEIIAEIKGKGAYHLFKHESGTHRVQRIPITESQGR 192

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
            HTS +++ V P   +++++EI   D RID +RASG GGQHVNTTDSAVRITH+PTG+VV
Sbjct: 193 IHTSAATVAVLP-EAENVDVEIKPEDLRIDVFRASGHGGQHVNTTDSAVRITHLPTGMVV 251

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQ 318
            CQ E+SQ KNK +A  +L+++LY+   +K++E     +  K++IG G    +IR+Y   
Sbjct: 252 SCQDEKSQLKNKEKALKILKSRLYDFYRRKKDEER--AKERKSQIGSGDRSERIRTYNF- 308

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           P   V D R N+       +++GDLD+ ++A +  ++
Sbjct: 309 PQGRVTDHRINLTLYKLDSIMEGDLDELIEALIVDEQ 345


>gi|325981709|ref|YP_004294111.1| peptide chain release factor 1 [Nitrosomonas sp. AL212]
 gi|325531228|gb|ADZ25949.1| peptide chain release factor 1 [Nitrosomonas sp. AL212]
          Length = 359

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 113/348 (32%), Positives = 180/348 (51%), Gaps = 8/348 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D       RL  LN          ++   + L RE   +   +   +  Q    D   
Sbjct: 5   IMDRLTRLSVRLDELNHLLSSESATADLDHYRKLTREHAEIVPIVELYRSYQHFERDVQT 64

Query: 72  LLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E+  + D  +  +      +   ++     Q + L     D  + +LE+ AG GG ES
Sbjct: 65  AREMHADLDMRAFAETEIQIGKEKLIQIESEIQKQLLPKDPNDERNIFLEIRAGTGGDES 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY+R+AE+++++ E +     E  G K     I G  AY  LK E G HR+
Sbjct: 125 ALFAGNLFRMYSRYAERQRWQVEIISQSLSEIGGYKEIIAKIIGYGAYSKLKFESGGHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS  ++ + P  D+  E+ ++ ++ RIDT+RASGAGGQH+N TDSAV
Sbjct: 185 QRVPVTETQGRVHTSTCTVAIMPEADEVSEVVLNPAELRIDTFRASGAGGQHINKTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+TH+PTG+VV+CQ  RSQHKNKAQA ++L A++++ ++  R + A    + K+ +G G 
Sbjct: 245 RVTHLPTGIVVECQDGRSQHKNKAQALSVLAARIHDKQM--RAQHAEQAAARKSLVGTGE 302

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       ++DGD+D+   A +A  +
Sbjct: 303 RSERIRTYNF-PQGRVTDHRINLTLYKMDQIMDGDIDELCSALMAEHQ 349


>gi|167464538|ref|ZP_02329627.1| peptide chain release factor 1 [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 357

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 117/351 (33%), Positives = 180/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D       R   L+    DP +  +  + +   +E+  L  A     E +  L     
Sbjct: 2   MLDRLQALADRYEKLSELLCDPDVTSDTKKLREYSKEQSGLQEAYDTYMEYKQVLGQLEA 61

Query: 72  LLELALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +  E+ D  + +     ++    R +   E  +   L     D+ +  +EV   AGG
Sbjct: 62  AKAMQKEKLDDEMSELVKMEIEELSGRKEELEERLKILMLPKDPNDNKNVIVEVRGAAGG 121

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE L+ +  +  G K  T +IKG  AY  LK E G 
Sbjct: 122 DEAALFAADLYRMYSRYAESQGWKTEVLDANLNDLGGFKEITFMIKGNGAYSKLKYESGA 181

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS S++ V P   + I+IEI +SD R+DT+ +SGAGGQ VNTT 
Sbjct: 182 HRVQRIPVTESGGRIHTSTSTVAVMP-EMEDIDIEIKDSDIRVDTFCSSGAGGQSVNTTK 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+V  CQ  +SQ+ NKA+A  +LRA++Y+    ++EE A      K+++G
Sbjct: 241 SAVRVTHVPTGIVATCQDGKSQNDNKAKALQVLRARIYD--QVRQEEEAKYAGERKSKVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L GDL++ + A     +
Sbjct: 299 TGDRSERIRTYNF-PQSRVTDHRIGLTLHKLDSILGGDLEEIITALTMAAQ 348


>gi|15925108|ref|NP_372642.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15927692|ref|NP_375225.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           N315]
 gi|21283771|ref|NP_646859.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49486911|ref|YP_044132.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57652140|ref|YP_186925.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           COL]
 gi|87160795|ref|YP_494718.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88196022|ref|YP_500835.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|148268569|ref|YP_001247512.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           JH9]
 gi|150394633|ref|YP_001317308.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           JH1]
 gi|151222234|ref|YP_001333056.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156980433|ref|YP_001442692.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|161510323|ref|YP_001575982.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221141637|ref|ZP_03566130.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           str. JKD6009]
 gi|253315787|ref|ZP_04839000.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           str. CF-Marseille]
 gi|253731044|ref|ZP_04865209.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253733048|ref|ZP_04867213.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|255006906|ref|ZP_05145507.2| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257793876|ref|ZP_05642855.1| peptide chain release factor 1 [Staphylococcus aureus A9781]
 gi|258407044|ref|ZP_05680194.1| peptide chain release factor 1 [Staphylococcus aureus A9763]
 gi|258422066|ref|ZP_05684983.1| peptide chain release factor 1 [Staphylococcus aureus A9719]
 gi|258433565|ref|ZP_05688638.1| peptide chain release factor 1 [Staphylococcus aureus A9299]
 gi|258440460|ref|ZP_05690630.1| peptide chain release factor 1 [Staphylococcus aureus A8115]
 gi|258445668|ref|ZP_05693846.1| peptide chain release factor 1 [Staphylococcus aureus A6300]
 gi|258450122|ref|ZP_05698217.1| peptide chain release factor RF1 [Staphylococcus aureus A6224]
 gi|258453423|ref|ZP_05701405.1| peptide chain release factor 1 [Staphylococcus aureus A5937]
 gi|262049285|ref|ZP_06022160.1| peptide chain release factor 1 [Staphylococcus aureus D30]
 gi|262052620|ref|ZP_06024814.1| peptide chain release factor 1 [Staphylococcus aureus 930918-3]
 gi|269203754|ref|YP_003283023.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282894762|ref|ZP_06302988.1| peptide chain release factor 1 [Staphylococcus aureus A8117]
 gi|282923106|ref|ZP_06330791.1| peptide chain release factor 1 [Staphylococcus aureus A9765]
 gi|282929042|ref|ZP_06336627.1| peptide chain release factor 1 [Staphylococcus aureus A10102]
 gi|284025152|ref|ZP_06379550.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           132]
 gi|294850088|ref|ZP_06790825.1| peptide chain release factor 1 [Staphylococcus aureus A9754]
 gi|295407048|ref|ZP_06816850.1| peptide chain release factor 1 [Staphylococcus aureus A8819]
 gi|296275403|ref|ZP_06857910.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MR1]
 gi|297210061|ref|ZP_06926454.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|297246047|ref|ZP_06929904.1| peptide chain release factor 1 [Staphylococcus aureus A8796]
 gi|300910424|ref|ZP_07127876.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|304379299|ref|ZP_07362038.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|54039049|sp|P66019|RF1_STAAN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|54039050|sp|P66020|RF1_STAAW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|54041594|sp|P66018|RF1_STAAM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56749376|sp|Q6G7J2|RF1_STAAS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71153097|sp|Q5HE82|RF1_STAAC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361613|sp|Q2FF10|RF1_STAA3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361614|sp|Q2FWE0|RF1_STAA8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223609|sp|A7X4W4|RF1_STAA1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|172048990|sp|A6QIW2|RF1_STAAE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039994|sp|A6U3K3|RF1_STAA2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039995|sp|A5IUR3|RF1_STAA9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039996|sp|A8YY83|RF1_STAAT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|13701912|dbj|BAB43204.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           N315]
 gi|14247891|dbj|BAB58280.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|21205213|dbj|BAB95907.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49245354|emb|CAG43829.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57286326|gb|AAW38420.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           COL]
 gi|87126769|gb|ABD21283.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87203580|gb|ABD31390.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147741638|gb|ABQ49936.1| bacterial peptide chain release factor 1 (bRF-1) [Staphylococcus
           aureus subsp. aureus JH9]
 gi|149947085|gb|ABR53021.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           JH1]
 gi|150375034|dbj|BAF68294.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156722568|dbj|BAF78985.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|160369132|gb|ABX30103.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|253725232|gb|EES93961.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253728956|gb|EES97685.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257787848|gb|EEV26188.1| peptide chain release factor 1 [Staphylococcus aureus A9781]
 gi|257841377|gb|EEV65821.1| peptide chain release factor 1 [Staphylococcus aureus A9763]
 gi|257841966|gb|EEV66398.1| peptide chain release factor 1 [Staphylococcus aureus A9719]
 gi|257849296|gb|EEV73275.1| peptide chain release factor 1 [Staphylococcus aureus A9299]
 gi|257852529|gb|EEV76447.1| peptide chain release factor 1 [Staphylococcus aureus A8115]
 gi|257855507|gb|EEV78444.1| peptide chain release factor 1 [Staphylococcus aureus A6300]
 gi|257856596|gb|EEV79502.1| peptide chain release factor RF1 [Staphylococcus aureus A6224]
 gi|257864404|gb|EEV87150.1| peptide chain release factor 1 [Staphylococcus aureus A5937]
 gi|259159490|gb|EEW44540.1| peptide chain release factor 1 [Staphylococcus aureus 930918-3]
 gi|259162650|gb|EEW47217.1| peptide chain release factor 1 [Staphylococcus aureus D30]
 gi|262076044|gb|ACY12017.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|269941717|emb|CBI50124.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           TW20]
 gi|282589348|gb|EFB94440.1| peptide chain release factor 1 [Staphylococcus aureus A10102]
 gi|282593297|gb|EFB98294.1| peptide chain release factor 1 [Staphylococcus aureus A9765]
 gi|282762850|gb|EFC02984.1| peptide chain release factor 1 [Staphylococcus aureus A8117]
 gi|285817782|gb|ADC38269.1| Peptide chain release factor 1 [Staphylococcus aureus 04-02981]
 gi|294823036|gb|EFG39468.1| peptide chain release factor 1 [Staphylococcus aureus A9754]
 gi|294968073|gb|EFG44100.1| peptide chain release factor 1 [Staphylococcus aureus A8819]
 gi|296885261|gb|EFH24201.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|297177046|gb|EFH36301.1| peptide chain release factor 1 [Staphylococcus aureus A8796]
 gi|300888266|gb|EFK83457.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|302751999|gb|ADL66176.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|304342158|gb|EFM08058.1| peptide chain release factor RF1 [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|312830470|emb|CBX35312.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315128789|gb|EFT84789.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315196948|gb|EFU27290.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320140710|gb|EFW32562.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320143686|gb|EFW35463.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329314803|gb|AEB89216.1| Peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329723967|gb|EGG60491.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           21189]
 gi|329726324|gb|EGG62792.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           21172]
 gi|329729314|gb|EGG65722.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           21193]
          Length = 358

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 114/351 (32%), Positives = 185/351 (52%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +   +  + +  +   
Sbjct: 1   MFDQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKAKKEELAD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
           + E+  E DD   ++   +    IK E+   +       +     D  D  +E+ A AGG
Sbjct: 61  IEEMLSETDDKEEVEMLKEESNGIKAELPNLEEELKILLIPKDPNDDKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L+RMY+++AE + FKTE +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTGV+     E+SQ +N+ +A  +L+A+LY++++Q  EE        K+ +G
Sbjct: 240 SAVRITHLPTGVIATSS-EKSQIQNREKAMKVLKARLYDMKVQ--EEQQKYASQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G L++ + A    ++
Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGHLEEIIDALTLSEQ 346


>gi|298244286|ref|ZP_06968092.1| peptide chain release factor 2 [Ktedonobacter racemifer DSM 44963]
 gi|297551767|gb|EFH85632.1| peptide chain release factor 2 [Ktedonobacter racemifer DSM 44963]
          Length = 337

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 137/320 (42%), Positives = 211/320 (65%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
            P  W +  +A+  M++   L   ++  +++  +L D   L  +  EE D  +  E + +
Sbjct: 2   QPDFWSDNRKAQAHMQQLNALREEVTTWEQLATQLKDLQELALMLEEEPDDDMQAEVAQS 61

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
           +  I+ ++E  +F  +LSGE D  +A L +HAG+GG ++QDWA MLLRMY RWA++ +F+
Sbjct: 62  IHPIEEQIEKLEFALMLSGEHDEKNAILSIHAGSGGVDAQDWAEMLLRMYLRWADQHRFR 121

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
           T+  +  +GEEAGIKSAT+ I+G  AYG+L+ E G HRL+R+SP+D+  RR TSF+ + +
Sbjct: 122 TQIYDYSEGEEAGIKSATVEIEGRFAYGYLRSEAGTHRLIRLSPFDAAHRRQTSFAKVEL 181

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P ++++IEI I   D  +DTYR++GAGGQHVN TDSAVR+ H+P+G+VV CQ ERSQ +
Sbjct: 182 MPDIENTIEISIRPEDIEVDTYRSTGAGGQHVNKTDSAVRMRHVPSGIVVTCQNERSQLQ 241

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A  +L+A+L+ELE +K +E A   +    +  +G QIRS ++ PY + KD RTN E
Sbjct: 242 NREVALKILKARLFELEQKKHDEEAARLKGEHVQADFGTQIRSVIVHPYNIAKDHRTNHE 301

Query: 332 KTSPSDVLDGDLDDFMKATL 351
            +  +  L G++D F+ A L
Sbjct: 302 TSDTTAYLAGNVDPFIHAYL 321


>gi|227112636|ref|ZP_03826292.1| peptide chain release factor 2 [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 293

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 167/290 (57%), Positives = 209/290 (72%), Gaps = 1/290 (0%)

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D   LLELA+EEDD     +T+  L  ++ ++   +F  + SG+ DS D YL++ A
Sbjct: 3   QGLEDVNGLLELAVEEDDEETFNDTTVELDALENKLGQLEFRRMFSGQYDSADCYLDIQA 62

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTE+QDWA+ML+RMY RWAE + FKTE +E  DG+ AG KSAT+ I G  A+GWL+ 
Sbjct: 63  GSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTKSATIKIIGDYAFGWLRT 122

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHV
Sbjct: 123 ETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHV 182

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+       E +K
Sbjct: 183 NRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQAMEDNK 242

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           ++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 243 SDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 291


>gi|194468250|ref|ZP_03074236.1| peptide chain release factor 1 [Lactobacillus reuteri 100-23]
 gi|194453103|gb|EDX42001.1| peptide chain release factor 1 [Lactobacillus reuteri 100-23]
          Length = 362

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 106/355 (29%), Positives = 181/355 (50%), Gaps = 12/355 (3%)

Query: 9   CLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---D 64
            +  +FD       R   LN    DP +  +        +E   L   +    + +    
Sbjct: 2   EMEEIFDKLQAVADRYDELNELISDPEVIADSQRFMKFSKEEGSLRETVEKYNQYKKVTQ 61

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHA 123
            + D+  LL    ++D  ++ +E     +  + ++E + +   +     D  +  +E+  
Sbjct: 62  TISDDEELLRETNDDDLTALTKEELAEAREEQAQLEKELEVLLIPKDPNDDKNIIMEIRG 121

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
            AGG E+  +A  L  MY R+AEK+ +K E ++ ++ E  G K   L+I G   Y  LK 
Sbjct: 122 AAGGDEASLFAADLYNMYLRYAEKQGWKVEVVDRNETEVGGFKEIALMITGDKVYSKLKF 181

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ R+   +S  R HTS +++ V P   + ++++I   D R+D YR+SGAGGQHV
Sbjct: 182 ENGAHRVQRVPVTESAGRVHTSTATVGVMP-EAEDVDVDIDPKDIRVDVYRSSGAGGQHV 240

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L++++Y+    +++E +   +  K
Sbjct: 241 NKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMRILKSRVYDYY--QQQEQSAYDQKRK 298

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             IG G    +IR+Y   P   V D R  +       ++ GDLD+ ++A +   +
Sbjct: 299 DAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGDLDEIIEALIVADQ 352


>gi|15827565|ref|NP_301828.1| peptide chain release factor 1 [Mycobacterium leprae TN]
 gi|221230042|ref|YP_002503458.1| peptide chain release factor 1 [Mycobacterium leprae Br4923]
 gi|13432207|sp|P45833|RF1_MYCLE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790892|sp|B8ZR31|RF1_MYCLB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|13093115|emb|CAC31515.1| peptide chain release factor 1 [Mycobacterium leprae]
 gi|219933149|emb|CAR71229.1| peptide chain release factor 1 [Mycobacterium leprae Br4923]
          Length = 361

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 116/350 (33%), Positives = 165/350 (47%), Gaps = 13/350 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L     DP L  N  EA+   R    L   ++  +++     D     EL
Sbjct: 8   IDVLLIEHAELELALADPELHSNPAEARKAGRRFARLAPIVATHRKLISARDDLQTAREL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A  ++  +      ++                       +D  LEV +G GG ES  +A 
Sbjct: 68  AAGDESFADEIAELESRIAELTTQLTDML--APHDPHGPDDIVLEVKSGEGGEESALFAA 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG---------PNAYGWLKGEQG 186
            L RMY R+AE+  +    L+    +  G K ATL I              +  +K E G
Sbjct: 126 DLARMYIRYAERHGWTVTVLDETTSDLGGYKDATLAISHKGASDGDAVDGVWSRMKFEGG 185

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS + + VYP  ++  E+ I ESD RID YR+SG GGQ VNTT
Sbjct: 186 VHRVQRVPVTESQGRVHTSAAGVLVYPEPEEIGEVHIDESDLRIDVYRSSGKGGQGVNTT 245

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE- 305
           DSAVRITH+PTGVVV CQ ERSQ +NK +A  +L A+L  +  ++    A+   +S+   
Sbjct: 246 DSAVRITHLPTGVVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALANASADRASQIRT 305

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +    +IR+Y   P   + D R   +  +   VLDGDLD    A  A  K
Sbjct: 306 VDRSERIRTYNF-PENRITDHRIGYKAHNLDQVLDGDLDALFDALSAADK 354


>gi|218900455|ref|YP_002448866.1| peptide chain release factor 1 [Bacillus cereus G9842]
 gi|228903804|ref|ZP_04067920.1| Peptide chain release factor 1 [Bacillus thuringiensis IBL 4222]
 gi|228911168|ref|ZP_04074974.1| Peptide chain release factor 1 [Bacillus thuringiensis IBL 200]
 gi|228942476|ref|ZP_04105013.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228968458|ref|ZP_04129447.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228975408|ref|ZP_04135964.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228982045|ref|ZP_04142338.1| Peptide chain release factor 1 [Bacillus thuringiensis Bt407]
 gi|218545538|gb|ACK97932.1| peptide chain release factor 1 [Bacillus cereus G9842]
 gi|228777709|gb|EEM25983.1| Peptide chain release factor 1 [Bacillus thuringiensis Bt407]
 gi|228784390|gb|EEM32413.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228791238|gb|EEM38851.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228817218|gb|EEM63306.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228848531|gb|EEM93379.1| Peptide chain release factor 1 [Bacillus thuringiensis IBL 200]
 gi|228855831|gb|EEN00375.1| Peptide chain release factor 1 [Bacillus thuringiensis IBL 4222]
 gi|326943127|gb|AEA19023.1| peptide chain release factor 1 [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 358

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 180/347 (51%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
                 R   LN    DP +  +  + +   +E+  +   +   +E +D   +L D   +
Sbjct: 8   LQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQETVEVYREYKDVREQLKDAKAM 67

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LE  L+ +   +++E    L+  +  +  + +   +     D  +  +EV   AGG E+ 
Sbjct: 68  LEEKLDAEMRDMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E G HR+ 
Sbjct: 128 LFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VNTT SAVR
Sbjct: 188 RVPETESGGRIHTSTATVAVLP-EAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTMSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K  +G G  
Sbjct: 247 LTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 305 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350


>gi|165977491|ref|YP_001653084.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|165877592|gb|ABY70640.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
          Length = 333

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 109/324 (33%), Positives = 175/324 (54%), Gaps = 7/324 (2%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
             +  + +   +E   L+  ++     +    D      L  + D   +  E     +  
Sbjct: 2   INDQDKFRAYSKEYSQLEEVVTTFNRWKKLNSDIEEAQILLDDPDMKEMAAEEIAENKAE 61

Query: 96  KLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
              +E   Q   L     D  +A+LE+ AG GG E+  +A  L RMY+R+ E ++++ E 
Sbjct: 62  IENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFAGDLYRMYSRYCESKRWRIEE 121

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +  ++ E+ G K   + I G   YG LK E G HR+ R+   +S  R HTS  ++ V P 
Sbjct: 122 MSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPE 181

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITHIPTG+VV+CQ ERSQHKNKA
Sbjct: 182 LPESEMPEINPTDLRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKA 241

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIE 331
           +A  +L +++ ++E +++       ++ +  +G G +   IR+Y   P   V D R N+ 
Sbjct: 242 KALAVLASRIVQVEQERQAAEQ--ADTRRNLLGSGDRSDKIRTYNY-PQGRVTDHRINLT 298

Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355
                +V++G +D+ ++  +   +
Sbjct: 299 VYRLDEVMNGKIDELIQPIITEYQ 322


>gi|90416952|ref|ZP_01224881.1| Peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2207]
 gi|90331299|gb|EAS46543.1| Peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2207]
          Length = 360

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 105/341 (30%), Positives = 170/341 (49%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+  +R   +     D  +  +    + L +E   L+  +      +D + +      L
Sbjct: 9   LDHLSERYEEVGALLSDGDIISDQNRFRTLSKEYSELELLVKTYGSYKDVMENIEEAKLL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +     +         Q   L     DS + +LE+ AG GG E+  
Sbjct: 69  LKDSDTDMRDMAQEEMRSGEERRQVLELEIQKLLLPKDPKDSKNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+++AE  ++K E +  + G+  G K     I G   Y  LK E G HR+ R
Sbjct: 129 FSGDLFRMYSKYAETNRWKVEIISENSGDHGGYKEVIARIVGQGVYSKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ +    D+   IEI++ D R+DT+RASG+GGQHVN TDSA+R+
Sbjct: 189 VPDTESQGRVHTSACTVAIMAEADEQDAIEINKGDLRVDTFRASGSGGQHVNKTDSAIRL 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+P+G+VV+CQ ERSQHKN+A+A ++L+A+L  ++ +         +  K  +G G   
Sbjct: 249 THLPSGLVVECQDERSQHKNRAKAMSVLQARLTAMQDE--AVAKEQSDQRKNLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            +IR+Y   P   V D R N+      +V++G LDD +   
Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYKLGEVMEGSLDDVLGPL 346


>gi|258645288|ref|ZP_05732757.1| peptide chain release factor 1 [Dialister invisus DSM 15470]
 gi|260402638|gb|EEW96185.1| peptide chain release factor 1 [Dialister invisus DSM 15470]
          Length = 360

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 108/346 (31%), Positives = 175/346 (50%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L  +  DP +  N  + + L +E   L   ++  +  +         + +
Sbjct: 6   LDAMEARFRSLEDQLSDPSVISNQNKWRTLSKEHSDLGEIVTLYRSYKKVDKTCKEAVNI 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             ++    + +   + L+  +           F  +     D  +  LE+ AG GG E+ 
Sbjct: 66  LEDKSQSDLHELAKEELKEAEKMKNELDKQIHFLLIPKDPNDGKNVILEIRAGTGGEEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LL+MY ++AE + ++ E  + ++ +  G +  T +I G NAY  LK E GVHR+ 
Sbjct: 126 LFAADLLKMYLKFAENKGWRVELADANETDLGGFREVTCIIYGKNAYSLLKFESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS  ++ V P   ++++I+I+  D RID YRASGAGGQH+N T SA+R
Sbjct: 186 RIPATESQGRVHTSAVTVAVLP-EVENVDIDINRDDLRIDVYRASGAGGQHINKTSSAIR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIP+G+VV CQ ERSQ +NK +A  +L+A+LY+  +  RE         K ++G G  
Sbjct: 245 ITHIPSGMVVTCQNERSQRQNKEKALQILKARLYDRAV--RESQDKTAADRKGQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +IR+Y   P   V D R N+      + L+G++D  +   +   
Sbjct: 303 SERIRTYNF-PQGRVTDHRVNVSVYQLDNFLNGNMDGILDVLIEAD 347


>gi|170746587|ref|YP_001752847.1| peptide chain release factor 1 [Methylobacterium radiotolerans JCM
           2831]
 gi|226739115|sp|B1M766|RF1_METRJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|170653109|gb|ACB22164.1| peptide chain release factor 1 [Methylobacterium radiotolerans JCM
           2831]
          Length = 361

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 108/349 (30%), Positives = 175/349 (50%), Gaps = 15/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   +  +     +  +      L RE   LD  ++ I+  +  L +   +  L
Sbjct: 9   LDAILARHDIVTAQLASGEI--DPETVVQLSRELSDLDPVVAAIRAYRAALENLAGVEAL 66

Query: 76  ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E      ++  +   +       +      Q   L    AD   A LEV AG GG E+
Sbjct: 67  IDEPGTDPEMRALAAEEKPEALAALETAHRALQLLLLPKDAADEKSAILEVRAGTGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY ++AE + ++ E +   +G   G +     +KG   +  LK E G HR+
Sbjct: 127 ALFAGDLFRMYAKYAESKGWRVEVISESEGTVGGFREVVAEVKGRGVFARLKFESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++I ++++D +IDT RA GAGGQHVN T+SA+
Sbjct: 187 QRVPDTETQGRIHTSAATVAVLP-EAEEVDIHVNDADLKIDTMRAQGAGGQHVNKTESAI 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VV  Q+ERSQHKN+A+A  +LRA+LY  E ++  + +      K ++G G 
Sbjct: 246 RITHLPTGIVVFVQEERSQHKNRARAMALLRARLY--EAERNAKDSARAADRKAQVGSGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+      +V+ G  LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQGRVTDHRINLTLYKLEEVMAGTALDEVVDALITEHQ 351


>gi|326692970|ref|ZP_08229975.1| peptide chain release factor 1 [Leuconostoc argentinum KCTC 3773]
          Length = 357

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 100/344 (29%), Positives = 173/344 (50%), Gaps = 8/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               V R   LN +  DP +  +  +   L +E   +   +      Q  + +     EL
Sbjct: 8   LQTVVDRYDELNEQLADPEVASDGQKYMALSKEAGEMRETVEVYTRYQQVIQEIQEAEEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E   +L+  K ++E + +   L     D  +  +E+    GG ES  +A
Sbjct: 68  LDDAEMAPLAKEDLADLKPEKAQLEDQLKILMLPKDPNDDKNIIMEIRGAVGGDESSLFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LL MY R+AEK+++    ++    E  G K   ++I G N Y  LK E G HR+ R+ 
Sbjct: 128 ADLLDMYRRYAEKQRWTLSIIDESMTEVGGYKEVAVMITGDNVYSKLKFESGAHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P  +D I+ E++ESD   + +R+ GAGGQ+VN   +AVR+ H
Sbjct: 188 STETQGRVHTSTATVGVMPEFED-IDFELAESDLEEEFFRSGGAGGQNVNKVSTAVRLVH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            PTG++V+ Q+ER+Q KN+ +A  +L +++Y+   Q+ E  A   E  K+ +G G    +
Sbjct: 247 KPTGIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNE--AAYAEQRKSAVGTGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R  +       V++G+L + + A +   +
Sbjct: 305 IRTYNY-PQNRVTDHRIGLTLNKLDRVMNGELGEVIDALIIADQ 347


>gi|300117843|ref|ZP_07055610.1| peptide chain release factor 1 [Bacillus cereus SJ1]
 gi|298724707|gb|EFI65382.1| peptide chain release factor 1 [Bacillus cereus SJ1]
          Length = 358

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 117/347 (33%), Positives = 180/347 (51%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
                 R   LN    DP +  +  + +   +E+  +   +   +E +D   +L D   +
Sbjct: 8   LQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQLKDAKAM 67

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LE  L+ D   +++E    L+  +  +  + +   +     D  +  +EV   AGG E+ 
Sbjct: 68  LEDKLDADMREMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E G HR+ 
Sbjct: 128 LFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VNTT SAVR
Sbjct: 188 RVPETESGGRIHTSTATVAVLP-EAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTMSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K  +G G  
Sbjct: 247 LTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 305 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350


>gi|262068281|ref|ZP_06027893.1| peptide chain release factor 1 [Fusobacterium periodonticum ATCC
           33693]
 gi|291378019|gb|EFE85537.1| peptide chain release factor 1 [Fusobacterium periodonticum ATCC
           33693]
          Length = 357

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 120/351 (34%), Positives = 184/351 (52%), Gaps = 11/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +  V R   LN     P +  +  +     +    +   +   KE +  + D   
Sbjct: 1   MFDKLEEVVARYEELNQILVSPEVLADSKKMIECNKAINEITEIVEKYKEYKKYVDDIEF 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGG 127
           + E    E D  + +  ++ L+  + ++       +   L   + D  +  +E+  GAGG
Sbjct: 61  IKESFKTEKDPDMKEMLNEELKEAEEKLPSLEEELKILLLPKDKNDDKNVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE+RK+K E +E  DGE  G+K     I G  AY  LK E GV
Sbjct: 121 DEAALFAADLFRMYSRYAERRKWKIEIIEKQDGELNGLKEVAFTIIGLGAYSRLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +++ R HTS +++ V P V+D  E+ +   D +IDTYR+ GAGGQHVN TD
Sbjct: 181 HRVQRVPKTEASGRIHTSTATVAVLPEVEDVQEVIVDPKDLKIDTYRSGGAGGQHVNMTD 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VVQCQ ERSQ KN+ +A   L  KLYE+E +K+          + ++G
Sbjct: 241 SAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQRSEVE--SERRLQVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   + D R  +        LDGD+D+ + A +   +
Sbjct: 299 TGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQ 348


>gi|47570471|ref|ZP_00241104.1| peptide chain release factor 1 [Bacillus cereus G9241]
 gi|228988555|ref|ZP_04148642.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229158891|ref|ZP_04286948.1| Peptide chain release factor 1 [Bacillus cereus ATCC 4342]
 gi|47552867|gb|EAL11285.1| peptide chain release factor 1 [Bacillus cereus G9241]
 gi|228624502|gb|EEK81272.1| Peptide chain release factor 1 [Bacillus cereus ATCC 4342]
 gi|228771172|gb|EEM19651.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 358

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 180/347 (51%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
                 R   LN    DP +  +  + +   +E+  +   +   +E +D   +L D   +
Sbjct: 8   LQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQETVEVYREYKDVREQLKDAKAM 67

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LE  L+ +   +++E    L+  +  +  + +   +     D  +  +EV   AGG E+ 
Sbjct: 68  LEDKLDAEMREMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E G HR+ 
Sbjct: 128 LFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VNTT SAVR
Sbjct: 188 RVPETESGGRIHTSTATVAVLP-EAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTMSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K  +G G  
Sbjct: 247 LTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 305 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350


>gi|163784022|ref|ZP_02178981.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880707|gb|EDP74252.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 359

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 121/344 (35%), Positives = 182/344 (52%), Gaps = 10/344 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLILLE 74
               +L  +  K   P +  N  + + L +E +HL   +      +     + +   LL 
Sbjct: 11  ELEAKLKEVEEKLASPEVANNPKQLQELAKEHKHLAYVVELFNRYENIEKSIKETKELLH 70

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
              EE      +E  +   + +      Q   +     D  +  LE+  GAGG E+  +A
Sbjct: 71  SQDEEMRLLAEEELENLKSQKEKLESEIQIALIPKDPNDDKNVILEIRQGAGGDEAALFA 130

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+AEK  +K E L +H+ E  GIK    LIKG  AY  LK E GVHR+ R+ 
Sbjct: 131 AELFRMYQRYAEKNGWKVEILSLHENERGGIKEVIALIKGEGAYSKLKYESGVHRVQRVP 190

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S+ R HTS +++ V P   + +++EI+  D +I+T RASGAGGQHVNTTDSAVRITH
Sbjct: 191 ETESSGRIHTSTATVAVLP-EAEEVDVEINPDDLKIETMRASGAGGQHVNTTDSAVRITH 249

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV CQ ERSQ +N+A+A  +LRA+L +   + ++E        K+++G G    +
Sbjct: 250 IPTGIVVSCQDERSQLQNRAKAMQILRARLKDYYDRIQQEKIK--SERKSQVGTGDRSEK 307

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R        +++LDG+LD+ +   +   +
Sbjct: 308 IRTYNF-PQNRVTDHRIGYTSHRINEILDGELDEIIDQLILKDQ 350


>gi|289550267|ref|YP_003471171.1| Peptide chain release factor 1 [Staphylococcus lugdunensis
           HKU09-01]
 gi|315660273|ref|ZP_07913128.1| peptide chain release factor RF1 [Staphylococcus lugdunensis
           M23590]
 gi|289179799|gb|ADC87044.1| Peptide chain release factor 1 [Staphylococcus lugdunensis
           HKU09-01]
 gi|315494700|gb|EFU83040.1| peptide chain release factor RF1 [Staphylococcus lugdunensis
           M23590]
          Length = 358

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 117/351 (33%), Positives = 186/351 (52%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  N  + +   +E+  L   +   +E +++  +   
Sbjct: 1   MFDQLDIVEERYEQLNEMLSDPDVVNNADKLRKYSKEQAELQKTVDVYREYKNKKEELSD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKL----EVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           + ++  E DD   ++   +    +K       E  +F  +     D  D  +E+ A AGG
Sbjct: 61  IEDMLSETDDKEEIEMLKEESSNLKDALPLLEEKLKFLLIPKDPNDDKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L+RMYT++AE   F+TE +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLMRMYTKYAEANGFRTEVVEATESDHGGYKEVSFQVSGAGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTGV+     E+SQ +N+ +A  +L+A+LY+++LQ  EE        K+ +G
Sbjct: 240 SAVRITHIPTGVIATSS-EKSQIQNREKALKVLKARLYDMKLQ--EEQQKYAAQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    ++R+Y   P   V D R  +       +++G LD+ + A    ++
Sbjct: 297 TGDRSERVRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIIDALTLSEQ 346


>gi|293609440|ref|ZP_06691742.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827892|gb|EFF86255.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325122703|gb|ADY82226.1| peptide chain release factor 1 [Acinetobacter calcoaceticus PHEA-2]
          Length = 362

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 113/339 (33%), Positives = 169/339 (49%), Gaps = 7/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    + L RE   L        + +    D      +
Sbjct: 9   LDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLSEITEVWGKYRQAEEDIETAEMM 68

Query: 76  ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E     + + +          +     DSN AYLE+ AG GG E+  ++
Sbjct: 69  KSDPDFKDMAEEEIQANKTLLEELESQLNILMIPKDPNDSNAAYLEIRAGTGGDEAAIFS 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+++AE + ++ E L  ++GE  G K     + G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSKYAETQGWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P +D    +EI+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG VV+CQ+ERSQHKNKA+A  +L ++L   +       A   E  +  +G G    +
Sbjct: 249 IPTGTVVECQEERSQHKNKAKAMALLVSRLENAKR--AAADAATSEMRRDLVGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   + D R N+       +++GDL + + + 
Sbjct: 307 IRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 344


>gi|88810851|ref|ZP_01126108.1| Peptide chain release factor 1 [Nitrococcus mobilis Nb-231]
 gi|88792481|gb|EAR23591.1| Peptide chain release factor 1 [Nitrococcus mobilis Nb-231]
          Length = 362

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 116/359 (32%), Positives = 179/359 (49%), Gaps = 18/359 (5%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFI 59
           L ++L  LG         +R   +     DP +     +   L +E   L   +   S  
Sbjct: 5   LRQRLEQLG---------ERYEEIEALLADPTVIGEQKQFTALSQEYARLHPVVQALSKY 55

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           +E++  L     L E    E       E      +++   +  Q+  L     D    +L
Sbjct: 56  QEMEQVLTSTRALSEDPDPEIRALAKDEIRAAQLQLEELGQQLQWLMLPQDPDDEKGIFL 115

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           E+ AG GG E+  +A  L RMY R+AE+R+++ E +    GE  G K     ++G   Y 
Sbjct: 116 EIRAGTGGDEAALFAGDLFRMYARYAERRRWRLEIINEAPGEHGGYKEIISRVEGAGVYS 175

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            LK E G HR+ R+   +S  R HTS  ++ V P  +   EIE + ++ R+DT+RASGAG
Sbjct: 176 RLKFESGAHRVQRVPTTESQGRIHTSACTVAVLPEPEQIEEIETATAELRVDTFRASGAG 235

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQHVN TDSA+RITH+PTG+VV+CQ ERSQHKN+A+A  +L+AKL   E     +     
Sbjct: 236 GQHVNKTDSAIRITHLPTGLVVECQDERSQHKNRAKAMGLLQAKLTARER--ERQQQEQS 293

Query: 300 ESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            + ++ +G G    +IR+Y   P   V + R  +      ++L+GDLD  +   ++  +
Sbjct: 294 ATRRSLVGSGDRSERIRTYNF-PQSRVTEHRVGLTLYKLDEILEGDLDPIIDPLISSHR 351


>gi|84686944|ref|ZP_01014828.1| peptide chain release factor 1 [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84665141|gb|EAQ11621.1| peptide chain release factor 1 [Rhodobacterales bacterium HTCC2654]
          Length = 351

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 175/344 (50%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   QR  FL  K     L  +  E   + RE   L   +  I   +  L D      +
Sbjct: 7   LDAITQRFQFLEAKMSQ-GLSGD--EIAEVGREYAELKPVVEEIAAFRQLLSDIEDAEAM 63

Query: 76  ALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + ++      +R+ +  +  +   L    AD+  A +E+  G GG E+  +A
Sbjct: 64  LSDPEMRELAEDELPGLRERLPVMEQAMRVALLPRDAADARPAMVEIRPGTGGDEASLFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE R +K + LE    E  G+K     + G   +  LK E GVHR+ R+ 
Sbjct: 124 GDLLRMYQRYAEARGWKFDTLEQSLTEVGGVKEVVARVSGDGVFARLKFESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++I I  +D RIDT RASGAGGQHVNTTDSAVRITH
Sbjct: 184 ETESGGRIHTSAATVAVLP-EAEDVDIHIDPADIRIDTMRASGAGGQHVNTTDSAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV    E+SQH+N+  A  +L+ +L++ E Q+         + K ++G G    +
Sbjct: 243 IPTGIVVTSS-EKSQHRNREIAMQVLKTRLFDAERQR--AHDERASARKAQVGSGDRSER 299

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+      DV+ GDLD+ + A +   +
Sbjct: 300 IRTYNF-PQGRMTDHRINLTLYKLGDVMQGDLDEVIDALIEADQ 342


>gi|258453172|ref|ZP_05701163.1| peptide chain release factor 1 [Staphylococcus aureus A5948]
 gi|257859118|gb|EEV81975.1| peptide chain release factor 1 [Staphylococcus aureus A5948]
          Length = 358

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 114/351 (32%), Positives = 185/351 (52%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +   +  + +  +   
Sbjct: 1   MFDQLDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKGKKEELAD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
           + E+  E DD   ++   +    IK E+   +       +     D  D  +E+ A AGG
Sbjct: 61  IEEMLSETDDKEEVEMLKEESNGIKAELPNLEEELKILLIPKDPNDDKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L+RMY+++AE + FKTE +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTGV+     E+SQ +N+ +A  +L+A+LY++++Q  EE        K+ +G
Sbjct: 240 SAVRITHLPTGVIATSS-EKSQIQNREKAMKVLKARLYDMKVQ--EEQQKYASQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G L++ + A    ++
Sbjct: 297 TGDRSERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGHLEEIIDALTLSEQ 346


>gi|222624780|gb|EEE58912.1| hypothetical protein OsJ_10554 [Oryza sativa Japonica Group]
          Length = 356

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 145/351 (41%), Positives = 203/351 (57%), Gaps = 35/351 (9%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +++ +  +     W   ++R   L+   E P LW + + A  + RE   L   I  + + 
Sbjct: 33  VAQSVKLIKKRLKWGWILERSRQLSVVLERPDLWDDPVFAGKVSREHGELMGKIKSVNQF 92

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L +++ +L LA EED                      + E               V 
Sbjct: 93  EQELMEHIDMLRLAREED--------------------DNELE--------------TVQ 118

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTES DWA M++ MY+ WA++R +    +E   GE AGIK AT+ + G  A+G+ K
Sbjct: 119 AGAGGTESMDWAAMVMNMYSSWAQRRGYTVSIIEEMPGEIAGIKRATIKVDGEYAFGYAK 178

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQ 241
            E GVHRLVRISP+DS  RRHTSF+++ V P+  D S   +I +SD RI+ +R+ G GGQ
Sbjct: 179 AEVGVHRLVRISPFDSGKRRHTSFAAVAVVPILGDGSTRYQIKDSDLRIERFRSGGPGGQ 238

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H N T+SAVRI HIPTG+   CQ ERSQH NKA A  +L+++L +LE+ ++ ++      
Sbjct: 239 HANCTESAVRIVHIPTGITATCQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNADHTQ 298

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           S +EI WG QIRSYVL PY+MVKDLRTN E + P  VL+GDLDDF+   L+
Sbjct: 299 SLSEISWGNQIRSYVLHPYRMVKDLRTNYEVSDPDSVLNGDLDDFILNFLS 349


>gi|169795523|ref|YP_001713316.1| peptide chain release factor 1 [Acinetobacter baumannii AYE]
 gi|213158536|ref|YP_002319834.1| peptide chain release factor 1 [Acinetobacter baumannii AB0057]
 gi|215483010|ref|YP_002325215.1| peptide chain release factor 1 [Acinetobacter baumannii AB307-0294]
 gi|332850713|ref|ZP_08432960.1| peptide chain release factor 1 [Acinetobacter baumannii 6013150]
 gi|332866986|ref|ZP_08437303.1| peptide chain release factor 1 [Acinetobacter baumannii 6013113]
 gi|226739095|sp|B7H0L9|RF1_ACIB3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739096|sp|B7IBA1|RF1_ACIB5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238688120|sp|B0V7E0|RF1_ACIBY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169148450|emb|CAM86316.1| peptide chain release factor 1 [Acinetobacter baumannii AYE]
 gi|213057696|gb|ACJ42598.1| peptide chain release factor 1 [Acinetobacter baumannii AB0057]
 gi|213989032|gb|ACJ59331.1| peptide chain release factor 1 [Acinetobacter baumannii AB307-0294]
 gi|332730550|gb|EGJ61866.1| peptide chain release factor 1 [Acinetobacter baumannii 6013150]
 gi|332734315|gb|EGJ65443.1| peptide chain release factor 1 [Acinetobacter baumannii 6013113]
          Length = 362

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 113/339 (33%), Positives = 169/339 (49%), Gaps = 7/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    + L RE   L        + +    D      +
Sbjct: 9   LDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLTEITEVWGKYRQAEEDIETAEMM 68

Query: 76  ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E     + + +          +     DSN AYLE+ AG GG E+  ++
Sbjct: 69  KSDPDFKDMAEEEIQANKVLLEELESQLNILMIPKDPNDSNAAYLEIRAGTGGDEAAIFS 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+++AE + ++ E L  ++GE  G K     + G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSKYAESQGWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P +D    +EI+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG VV+CQ+ERSQHKNKA+A  +L ++L   +       A   E  +  +G G    +
Sbjct: 249 IPTGTVVECQEERSQHKNKAKAMALLVSRLENAKR--AAADAATSEMRRDLVGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   + D R N+       +++GDL + + + 
Sbjct: 307 IRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 344


>gi|260549389|ref|ZP_05823608.1| peptide chain release factor 1 [Acinetobacter sp. RUH2624]
 gi|260407498|gb|EEX00972.1| peptide chain release factor 1 [Acinetobacter sp. RUH2624]
          Length = 362

 Score =  223 bits (567), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 113/339 (33%), Positives = 169/339 (49%), Gaps = 7/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    + L RE   L        + +    D      +
Sbjct: 9   LDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLTEITEVWGKYRQAEEDIETAEMM 68

Query: 76  ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E     + + +          +     DSN AYLE+ AG GG E+  ++
Sbjct: 69  KSDPDFKDMAEEEIQANKALLEELESQLNILMIPKDPNDSNAAYLEIRAGTGGDEAAIFS 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+++AE + ++ E L  ++GE  G K     + G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSKYAETQGWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P +D    +EI+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG VV+CQ+ERSQHKNKA+A  +L ++L   +       A   E  +  +G G    +
Sbjct: 249 IPTGTVVECQEERSQHKNKAKAMALLVSRLENAKR--AAADAATSEMRRDLVGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   + D R N+       +++GDL + + + 
Sbjct: 307 IRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 344


>gi|257462414|ref|ZP_05626828.1| peptide chain release factor 1 [Fusobacterium sp. D12]
 gi|317060078|ref|ZP_07924563.1| peptide chain release factor 1 [Fusobacterium sp. D12]
 gi|313685754|gb|EFS22589.1| peptide chain release factor 1 [Fusobacterium sp. D12]
          Length = 359

 Score =  223 bits (567), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 122/352 (34%), Positives = 182/352 (51%), Gaps = 12/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +  V R   L+T    P +  +  +     +    L   I   KE +    +   
Sbjct: 1   MFDKLEEVVARYEELHTLLSSPEVLNDPKKMIECNKNLNALTPLIEKYKEYKAVKEEVDF 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
           + E    E D  +     + L+  + ++   + E           D N+  +E+  GAGG
Sbjct: 61  IKESLKTEKDEDMRVMMQEELKENEDKMPELEKELKILLLPKDPNDDNNVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNAYGWLKGEQG 186
            E+  +A  L RMY R+AE++K+K E +E  D E   G+K     I+G  AY  LK E G
Sbjct: 121 DEAAIFAGDLFRMYCRYAERKKWKVEIIEKQDLEGLDGLKEVAFSIQGFGAYSKLKFESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS +++ V P V+D  E++I   D +IDTYR+ GAGGQHVN T
Sbjct: 181 VHRVQRVPKTESAGRIHTSTATVAVLPEVEDITEVQIDPKDLKIDTYRSGGAGGQHVNMT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTGV+VQCQ ERSQ KN+ +A   L +KL E+E++K+          + ++
Sbjct: 241 DSAVRITHLPTGVIVQCQDERSQLKNREKAMKHLASKLLEMEIEKQRSEIEG--ERRLQV 298

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   + D R  +        LDGDLD+ + A +   +
Sbjct: 299 GTGDRAEKIRTYNF-PQGRITDHRIKLTVHQLEAFLDGDLDEMIDALITFSQ 349


>gi|223938118|ref|ZP_03630015.1| peptide chain release factor 1 [bacterium Ellin514]
 gi|223893162|gb|EEF59626.1| peptide chain release factor 1 [bacterium Ellin514]
          Length = 359

 Score =  223 bits (567), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 111/343 (32%), Positives = 168/343 (48%), Gaps = 12/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R S +     DP  ++N    + L +E   L   ++        + D      L
Sbjct: 7   IDKFARRFSEVEASLSDPKAFENAQRFQELSKEYSRLKGLVAGGSAYLKAVADLEENKTL 66

Query: 76  ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
              E   S +   +           K      Q   L     DS +  +E+ AGAGG+ES
Sbjct: 67  LAAEPADSEMALMAKEEVTRLEEVVKKLGLEVQAGVLPPDPTDSRNTIVEIRAGAGGSES 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMYTR+AE + +K E+++    +  G K     I G + Y  LK E GVHR+
Sbjct: 127 ALFAADLYRMYTRYAESQGWKVESIDASPSDLGGFKEVIFGITGSDVYKRLKYESGVHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS  ++ V P   + ++I+I   D  +D  RASG GGQ VNTTDSAV
Sbjct: 187 QRVPATEAQGRIHTSTCTVAVLP-EAEEVDIDIRPEDLSVDRCRASGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+ HIP+G++V C  ERSQHKNKA+A  +LR++L  LE +  +E A      K ++G G 
Sbjct: 246 RLHHIPSGLIVYCADERSQHKNKAKAMTVLRSRL--LEKKIADENAKYAAQRKEQVGTGE 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              +IR+Y   P   V D R  +   +    ++G++D  ++  
Sbjct: 304 RNERIRTYNF-PQNRVTDHRIEVTLYNLPTFVEGEIDSIIEPL 345


>gi|291288202|ref|YP_003505018.1| peptide chain release factor 1 [Denitrovibrio acetiphilus DSM
           12809]
 gi|290885362|gb|ADD69062.1| peptide chain release factor 1 [Denitrovibrio acetiphilus DSM
           12809]
          Length = 356

 Score =  223 bits (567), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 120/351 (34%), Positives = 185/351 (52%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   ++   L  K  DP L ++ +  +   +E   L   +   +E          
Sbjct: 1   MFDKLDEVRKKYYELTDKLVDPELMKDNMAFQKTAKEHAELKPVVERYEEYLAEKEAVDE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
              +    DD  +++     L+  K  ++  + E           D  + +LE+ AG GG
Sbjct: 61  AHSIIKTSDDKDLVELAEMELEEKKGVLDELEDELKKSLLTKDPYDDKNIFLEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  LL+MYT++AE   +K E ++ ++    G K    L+KG  AY  LK E G 
Sbjct: 121 DEASLFAGDLLKMYTKYAEMNGWKVEVVDFNETGVGGYKEVVALVKGHGAYSKLKFEAGG 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + +++ I + D RID +RASGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSACTVAVLP-EAEDVDVHIEQKDLRIDVFRASGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTGVVV CQ ERSQ KN+ +A  +L++K+ E E+QK++  +    S K ++G
Sbjct: 240 SAVRMTHIPTGVVVSCQDERSQIKNREKAMKLLKSKILEAEIQKKQ--SAEAASRKLQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R   E  +    L G+++D + AT+A  +
Sbjct: 298 SGDRSERIRTYNF-PQNRVTDHRIK-ESANLDRFLLGEMEDMIDATIAFDQ 346


>gi|262375291|ref|ZP_06068524.1| peptide chain release factor 1 [Acinetobacter lwoffii SH145]
 gi|262309545|gb|EEY90675.1| peptide chain release factor 1 [Acinetobacter lwoffii SH145]
          Length = 362

 Score =  222 bits (566), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 117/339 (34%), Positives = 171/339 (50%), Gaps = 7/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    + L RE   L    +   + +    D      +
Sbjct: 9   LDQLSDRHEELTALLADVEVISDNKRFRQLSREHNDLTEITNVWTKYRQAEEDIETAQAM 68

Query: 76  ALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + QE     +  I+          +     D+N AYLE+ AG GG E+  ++
Sbjct: 69  LSDPDFKEMAQEEIKENKALIESLEADLNILMIPKDPNDANSAYLEIRAGTGGDEAAIFS 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+++AE + ++ E L  ++GE  G K    LI G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSKYAENQGWRIEILSENEGEHGGYKEVICLINGDGVYGRLKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P +D    ++I+ +D RIDTYRASGAGGQHVN TDSAVRITH
Sbjct: 189 ATESQGRVHTSACTVAILPEIDVDTSVDINPADLRIDTYRASGAGGQHVNKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG VV+CQ+ERSQHKNKA+A  +L ++L   +       A   E  +  +G G    +
Sbjct: 249 IPTGTVVECQEERSQHKNKAKAMALLVSRLENAKR--AAADAATSEMRRDLVGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   + D R N+       V++GDL + + + 
Sbjct: 307 IRTYNY-PQGRMTDHRINLTLYKLDAVMEGDLTELLDSL 344


>gi|310644400|ref|YP_003949159.1| peptide chain release factor 1 [Paenibacillus polymyxa SC2]
 gi|309249351|gb|ADO58918.1| Peptide chain release factor 1 [Paenibacillus polymyxa SC2]
          Length = 355

 Score =  222 bits (566), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 104/351 (29%), Positives = 177/351 (50%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D   +   R   L+    DP +  +  + +   +E+  L  A     E +  + +   
Sbjct: 1   MLDRLQSLADRYDKLSELLCDPDVANDSKKLRDYSKEQSDLQPAYEAYTEYKTVVEELDA 60

Query: 72  LLELALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +  E+ D  + +     ++    R +   E  +   L     D  +  +E+   AGG
Sbjct: 61  AKAMQAEKLDDEMREMVKMEIEELSARKRELDEKIRILLLPKDPNDDKNVIIEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+A+ + ++ E ++ +  +  G K    +I G  AY  +K E G 
Sbjct: 121 DEAALFAADLYRMYTRYADTQGWRVELMDANMNDLGGFKEVIFMINGRGAYSKMKFESGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS S++ V P   + ++IEI + D R+DT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRIPTTESGGRIHTSTSTVSVMP-EAEEVDIEILDKDIRVDTFCSSGAGGQSVNTTK 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+V  CQ  +SQ+ NK +A  +LRA++ ++  Q  EE A      K+++G
Sbjct: 240 SAVRVTHMPTGIVATCQDGKSQNSNKEKALQVLRARISDMMRQ--EEEAKYAGERKSKVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       V++G++++ + A    ++
Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTMHKLDQVMNGEIEEIVSALTIAEQ 347


>gi|127513840|ref|YP_001095037.1| peptide chain release factor 1 [Shewanella loihica PV-4]
 gi|166223603|sp|A3QH30|RF1_SHELP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|126639135|gb|ABO24778.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
           loihica PV-4]
          Length = 361

 Score =  222 bits (566), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 181/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     D  +  +    + L +E   L++ +   K  +    D     E+
Sbjct: 9   LEGLLERNEEVLALLSDAEIIADQERFRALSKEYSQLEDVVKSFKAYRQAEEDLASAQEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D         +  +            Q   L     D N+A+LE+ AGAGG E+  
Sbjct: 69  LAEDDADLKEMAQEEIKEAKATLDVLEGELQILLLPKDPKDDNNAFLEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+ E  +++ E +  ++GE  G K   + + G   YG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYCEANRWQMEIMNANEGEHGGFKEIIVKVSGDGVYGKLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P + ++  IEI+ +D ++DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRVHTSACTVVVMPEIPEAEAIEINPADLKVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIP+G+VV+CQ +RSQHKN+AQA ++L A++  +E +KR        + +  +  G   
Sbjct: 249 THIPSGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSEEE--STRRNLVASGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            ++R+Y   P   V + R N+     S+V++GDLD  +   +   +
Sbjct: 307 ERVRTYNF-PQGRVSEHRINLTLYRLSEVMEGDLDAILGPLMQENQ 351


>gi|169633250|ref|YP_001706986.1| peptide chain release factor 1 [Acinetobacter baumannii SDF]
 gi|184158674|ref|YP_001847013.1| peptide chain release factor 1 [Acinetobacter baumannii ACICU]
 gi|239501457|ref|ZP_04660767.1| peptide chain release factor 1 [Acinetobacter baumannii AB900]
 gi|260554585|ref|ZP_05826806.1| peptide chain release factor 1 [Acinetobacter baumannii ATCC 19606]
 gi|332874369|ref|ZP_08442280.1| peptide chain release factor 1 [Acinetobacter baumannii 6014059]
 gi|238685536|sp|A3M6N7|RF1_ACIBT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238688133|sp|B0VM26|RF1_ACIBS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238690970|sp|B2HU82|RF1_ACIBC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169152042|emb|CAP00926.1| peptide chain release factor 1 [Acinetobacter baumannii]
 gi|183210268|gb|ACC57666.1| Protein chain release factor A [Acinetobacter baumannii ACICU]
 gi|193077723|gb|ABO12581.2| peptide chain release factor 1 [Acinetobacter baumannii ATCC 17978]
 gi|260411127|gb|EEX04424.1| peptide chain release factor 1 [Acinetobacter baumannii ATCC 19606]
 gi|322507515|gb|ADX02969.1| prfA [Acinetobacter baumannii 1656-2]
 gi|323518589|gb|ADX92970.1| peptide chain release factor 1 [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332737448|gb|EGJ68364.1| peptide chain release factor 1 [Acinetobacter baumannii 6014059]
          Length = 362

 Score =  222 bits (566), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 113/339 (33%), Positives = 169/339 (49%), Gaps = 7/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    + L RE   L        + +    D      +
Sbjct: 9   LDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLTEITEVWGKYRQAEEDIETAEMM 68

Query: 76  ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E     + + +          +     DSN AYLE+ AG GG E+  ++
Sbjct: 69  KSDPDFKDMAEEEIQANKALLEELESQLNILMIPKDPNDSNAAYLEIRAGTGGDEAAIFS 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+++AE + ++ E L  ++GE  G K     + G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSKYAESQGWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P +D    +EI+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG VV+CQ+ERSQHKNKA+A  +L ++L   +       A   E  +  +G G    +
Sbjct: 249 IPTGTVVECQEERSQHKNKAKAMALLVSRLENAKR--AAADAATSEMRRDLVGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   + D R N+       +++GDL + + + 
Sbjct: 307 IRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 344


>gi|323492377|ref|ZP_08097530.1| peptide chain release factor 1 [Vibrio brasiliensis LMG 20546]
 gi|323313424|gb|EGA66535.1| peptide chain release factor 1 [Vibrio brasiliensis LMG 20546]
          Length = 362

 Score =  222 bits (566), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 113/346 (32%), Positives = 182/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  N  + + L +E   L+      +  Q    D +   E+
Sbjct: 9   LETLVERYEEVQHLLGDPDVIGNQDKFRALSKEYSQLEEVTKCFQAYQQAQEDLVAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           A E+D+        +  +  +         Q   L     D  + +LE+ AGAGG E+  
Sbjct: 69  ANEDDEEMREMAQEEIKEAKEAIERLSDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AEK+ ++ E +  ++ E  G K     + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSKFAEKKGWRVEVMSSNESEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RI
Sbjct: 189 VPATESQGRVHTSACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311
           TH+PTG VV+CQ ERSQHKNKA+A  +L A++  ++ ++ +  A   ++ +  +G G + 
Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARI--IQAEEAKRAAEESDTRRNLLGSGDRS 306

Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             IR+Y   P   V D R N+     ++V++GD+   +   +   +
Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTIYRLNEVMEGDVASLIDPVIQEHQ 351


>gi|70725918|ref|YP_252832.1| peptide chain release factor 1 [Staphylococcus haemolyticus
           JCSC1435]
 gi|119361616|sp|Q4L7Z9|RF1_STAHJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|68446642|dbj|BAE04226.1| peptide chain release factor 1 [Staphylococcus haemolyticus
           JCSC1435]
          Length = 358

 Score =  222 bits (566), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 114/351 (32%), Positives = 186/351 (52%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +   ++ + +  +   
Sbjct: 1   MFDQLDIVEERYEQLNEMLSDPEIVNDSDKLRKYSKEQADLQKTVDVYRDYKSKKEEIAE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
           + E+  E +D   ++   +    +K  +   +    F  +     D  D  +E+ A AGG
Sbjct: 61  IDEMLNETEDKEEIEMLKEESASLKSAIPELEEQLKFLLIPKDPNDEKDVIVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  LLRMY+++AE + FKTE +E  + +  G K  +  + G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLLRMYSKYAESQNFKTEIVEAAESDHGGYKEISFSVSGSGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EIEI   D +IDTYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTGV+     E+SQ +N+ +A  +L+A+LY+++LQ  EE        K+ +G
Sbjct: 240 SAVRITHLPTGVIATSS-EKSQIQNREKALKVLKARLYDMKLQ--EEQQKYAAQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    ++R+Y   P   V D R  +       +++G LD+ + A    ++
Sbjct: 297 TGDRSERVRTYNY-PQSRVTDHRIGLTLQKLDQIMEGKLDEIIDALTLSEQ 346


>gi|303235160|ref|ZP_07321780.1| peptide chain release factor 2 [Finegoldia magna BVS033A4]
 gi|302493752|gb|EFL53538.1| peptide chain release factor 2 [Finegoldia magna BVS033A4]
          Length = 329

 Score =  222 bits (566), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 155/326 (47%), Positives = 220/326 (67%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             +T     W +  +A+ +  E   + + +    EI++++ +  ++LE++ E++     +
Sbjct: 2   QQETMKAGFWDDSDKAQEIFDELNSVKDDVENYDEIEEKIEEVKMMLEISKEDNTEEYEK 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E S  L+ ++  V+  + ++LL GE D N+A + +HAGAGGTE+QDWA MLLRMYTRW  
Sbjct: 62  EISKTLKNLEKNVDEFKIKTLLVGEYDRNNAIMSIHAGAGGTEAQDWAEMLLRMYTRWIA 121

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            +K+  +  + +   E GIKS +L+++G NAYG+LK E+GVHRLVRISP+D   RRHTSF
Sbjct: 122 DKKYSYKITDYNQDTEGGIKSVSLIVQGINAYGFLKSEKGVHRLVRISPFDQQKRRHTSF 181

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S+ V+P + D+ +I+I + D +IDTYRASGAGGQHVN TDSAVRITHIPTGV VQCQ E
Sbjct: 182 ASVDVFPEIKDNHDIQIDDKDLKIDTYRASGAGGQHVNMTDSAVRITHIPTGVTVQCQTE 241

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQ  N+  A +ML AKL  ++ +++ E     +    +I WG QIRSYV QPY +VKD 
Sbjct: 242 RSQIANRKYAMDMLIAKLIMIKEEEKREKIEDIQGKYNQIAWGSQIRSYVFQPYTLVKDH 301

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLA 352
           RTN E +   DVLDGDLD F+ A L+
Sbjct: 302 RTNCESSQVQDVLDGDLDKFINAYLS 327


>gi|222053788|ref|YP_002536150.1| peptide chain release factor 1 [Geobacter sp. FRC-32]
 gi|221563077|gb|ACM19049.1| peptide chain release factor 1 [Geobacter sp. FRC-32]
          Length = 356

 Score =  222 bits (566), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 108/348 (31%), Positives = 175/348 (50%), Gaps = 9/348 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           LFD  +   +R   L     DP +  N  E + L RE   L   +   +  +  + +   
Sbjct: 2   LFDKIEELERRYQELEALLSDPVVLGNQPEFRKLSREHFDLSALVQAYRNYKRIISEIEG 61

Query: 72  LLELALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             EL  + +   +   E     ++        +   L     D     LE+ AG GG E+
Sbjct: 62  NRELLADPEMKEMAEAELESLEKQRDALESEIKLLLLPKDPNDDKSVILEIRAGTGGDEA 121

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY+R+AE  +++ E +   + E+ G K     ++G   +  LK E G HR+
Sbjct: 122 ALFAGDLFRMYSRFAETNRWRVEVISSSESEKGGFKEVVASVEGEGVFAKLKYESGTHRV 181

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS  ++ + P   + ++I+I+ +D +ID YR+SGAGGQHVNTTDSAV
Sbjct: 182 QRVPETEAQGRIHTSACTVAIMP-EAEDVDIDINPTDLKIDVYRSSGAGGQHVNTTDSAV 240

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG VV CQ+ERSQ KN+A+A  +L+ ++ +  LQ++   A +    K ++G G 
Sbjct: 241 RITHLPTGTVVACQEERSQIKNRAKAMKVLKTRILDNILQEQN--AKLAADRKQQVGSGD 298

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   + D R  +       ++ GD+ +   A  A  +
Sbjct: 299 RSERIRTYNF-PQGRMTDHRIGLTLYRLDAIMAGDIAEIADALRAHYQ 345


>gi|49188164|ref|YP_031417.1| peptide chain release factor 1 [Bacillus anthracis str. Sterne]
 gi|49480414|ref|YP_039322.1| peptide chain release factor 1 [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|52140231|ref|YP_086598.1| peptide chain release factor 1 [Bacillus cereus E33L]
 gi|118480364|ref|YP_897515.1| peptide chain release factor 1 [Bacillus thuringiensis str. Al
           Hakam]
 gi|165871326|ref|ZP_02215975.1| peptide chain release factor 1 [Bacillus anthracis str. A0488]
 gi|167636684|ref|ZP_02394972.1| peptide chain release factor 1 [Bacillus anthracis str. A0442]
 gi|170688145|ref|ZP_02879356.1| peptide chain release factor 1 [Bacillus anthracis str. A0465]
 gi|170709368|ref|ZP_02899781.1| peptide chain release factor 1 [Bacillus anthracis str. A0389]
 gi|177651841|ref|ZP_02934424.1| peptide chain release factor 1 [Bacillus anthracis str. A0174]
 gi|217962818|ref|YP_002341396.1| peptide chain release factor 1 [Bacillus cereus AH187]
 gi|218906507|ref|YP_002454341.1| peptide chain release factor 1 [Bacillus cereus AH820]
 gi|225867310|ref|YP_002752688.1| peptide chain release factor 1 [Bacillus cereus 03BB102]
 gi|227818092|ref|YP_002818101.1| peptide chain release factor 1 [Bacillus anthracis str. CDC 684]
 gi|228917938|ref|ZP_04081474.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228930337|ref|ZP_04093341.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228936614|ref|ZP_04099408.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228949050|ref|ZP_04111322.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229094441|ref|ZP_04225513.1| Peptide chain release factor 1 [Bacillus cereus Rock3-42]
 gi|229124833|ref|ZP_04254011.1| Peptide chain release factor 1 [Bacillus cereus 95/8201]
 gi|229142072|ref|ZP_04270597.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST26]
 gi|229187555|ref|ZP_04314695.1| Peptide chain release factor 1 [Bacillus cereus BGSC 6E1]
 gi|229199455|ref|ZP_04326118.1| Peptide chain release factor 1 [Bacillus cereus m1293]
 gi|229601300|ref|YP_002869544.1| peptide chain release factor 1 [Bacillus anthracis str. A0248]
 gi|254686248|ref|ZP_05150107.1| peptide chain release factor 1 [Bacillus anthracis str. CNEVA-9066]
 gi|254724243|ref|ZP_05186027.1| peptide chain release factor 1 [Bacillus anthracis str. A1055]
 gi|254735257|ref|ZP_05192966.1| peptide chain release factor 1 [Bacillus anthracis str. Western
           North America USA6153]
 gi|254744460|ref|ZP_05202140.1| peptide chain release factor 1 [Bacillus anthracis str. Kruger B]
 gi|254755798|ref|ZP_05207830.1| peptide chain release factor 1 [Bacillus anthracis str. Vollum]
 gi|254762138|ref|ZP_05213984.1| peptide chain release factor 1 [Bacillus anthracis str. Australia
           94]
 gi|301056797|ref|YP_003795008.1| peptide chain release factor 1 [Bacillus anthracis CI]
 gi|49182091|gb|AAT57467.1| peptide chain release factor 1 [Bacillus anthracis str. Sterne]
 gi|49331970|gb|AAT62616.1| peptide chain release factor 1 [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51973700|gb|AAU15250.1| peptide chain release factor 1 [Bacillus cereus E33L]
 gi|118419589|gb|ABK88008.1| bacterial peptide chain release factor 1 (bRF-1) [Bacillus
           thuringiensis str. Al Hakam]
 gi|164712993|gb|EDR18521.1| peptide chain release factor 1 [Bacillus anthracis str. A0488]
 gi|167527884|gb|EDR90706.1| peptide chain release factor 1 [Bacillus anthracis str. A0442]
 gi|170125716|gb|EDS94630.1| peptide chain release factor 1 [Bacillus anthracis str. A0389]
 gi|170667838|gb|EDT18590.1| peptide chain release factor 1 [Bacillus anthracis str. A0465]
 gi|172082545|gb|EDT67609.1| peptide chain release factor 1 [Bacillus anthracis str. A0174]
 gi|217065190|gb|ACJ79440.1| peptide chain release factor 1 [Bacillus cereus AH187]
 gi|218537315|gb|ACK89713.1| peptide chain release factor 1 [Bacillus cereus AH820]
 gi|225787237|gb|ACO27454.1| peptide chain release factor 1 [Bacillus cereus 03BB102]
 gi|227005978|gb|ACP15721.1| peptide chain release factor 1 [Bacillus anthracis str. CDC 684]
 gi|228584031|gb|EEK42186.1| Peptide chain release factor 1 [Bacillus cereus m1293]
 gi|228595922|gb|EEK53602.1| Peptide chain release factor 1 [Bacillus cereus BGSC 6E1]
 gi|228641361|gb|EEK97667.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST26]
 gi|228658624|gb|EEL14286.1| Peptide chain release factor 1 [Bacillus cereus 95/8201]
 gi|228688978|gb|EEL42805.1| Peptide chain release factor 1 [Bacillus cereus Rock3-42]
 gi|228810623|gb|EEM56972.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228823049|gb|EEM68887.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228829323|gb|EEM74956.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228841735|gb|EEM86846.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|229265708|gb|ACQ47345.1| peptide chain release factor 1 [Bacillus anthracis str. A0248]
 gi|300378966|gb|ADK07870.1| peptide chain release factor 1 [Bacillus cereus biovar anthracis
           str. CI]
 gi|324329278|gb|ADY24538.1| peptide chain release factor 1 [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 358

 Score =  222 bits (566), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 180/347 (51%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
                 R   LN    DP +  +  + +   +E+  +   +   +E +D   +L D   +
Sbjct: 8   LQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQLKDAKAM 67

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LE  L+ +   +++E    L+  +  +  + +   +     D  +  +EV   AGG E+ 
Sbjct: 68  LEDKLDAEMREMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E G HR+ 
Sbjct: 128 LFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VNTT SAVR
Sbjct: 188 RVPETESGGRIHTSTATVAVLP-EAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTMSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K  +G G  
Sbjct: 247 LTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 305 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350


>gi|226354826|ref|YP_002784566.1| peptide chain release factor 2 [Deinococcus deserti VCD115]
 gi|226316816|gb|ACO44812.1| putative Peptide chain release factor 2 (RF-2) [Deinococcus deserti
           VCD115]
          Length = 383

 Score =  222 bits (566), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 145/344 (42%), Positives = 207/344 (60%), Gaps = 6/344 (1%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G  FD     +RL+ L+ +  DP LW +   A+ + +E   L   +     +        
Sbjct: 31  GSTFDIPGKTRRLNELDRELSDPELWNDQSRARQVTQESGTLRRIVESYSSLHSDAQGLN 90

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            +LE+A EE+   +++E S      +  V+    E+L + +     A + V  GAGGTE+
Sbjct: 91  EMLEIADEEEREMLVEEQSSL----QTRVDELYRETLFTMKHADTAAIVRVKGGAGGTEA 146

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA ML RMY RWAE+R +K + L+   G++AG +S   +I+G  AYG +  E GVHRL
Sbjct: 147 QDWAGMLARMYMRWAERRGYKVDILDEQPGDQAGYQSIEFIIRGEKAYGMMAAEHGVHRL 206

Query: 191 VRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           VR+SP+DSN+RR TSF+S+ V P   ++ I I I +SD R D +R+ GAGGQ VNTTDSA
Sbjct: 207 VRVSPFDSNNRRQTSFASVDVVPEVPEEEINIHIPDSDLRRDVFRSQGAGGQGVNTTDSA 266

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+TH+PTG+ V CQ  RSQ KN   A  +L+ +LY++E++KRE        ++ ++ WG
Sbjct: 267 VRLTHLPTGIAVACQITRSQIKNAELALQILKQRLYDIEVKKREAEEAAARGAQAKVEWG 326

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            Q+RSYVL     +KD RT + K +P DVLDGDLD+ M A L  
Sbjct: 327 SQMRSYVLDKQ-YIKDHRTGLMKHNPDDVLDGDLDELMWAGLEW 369


>gi|254282871|ref|ZP_04957839.1| peptide chain release factor 1 [gamma proteobacterium NOR51-B]
 gi|219679074|gb|EED35423.1| peptide chain release factor 1 [gamma proteobacterium NOR51-B]
          Length = 360

 Score =  222 bits (566), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 116/346 (33%), Positives = 175/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   ++    D  +  +  + + L +E   LD  +   +  Q    D     E+
Sbjct: 9   LEQLRDRHEEVSAMLGDADVISDQNQFRDLSKEFSQLDEVVRVFEAYQRCQSDLSEAREM 68

Query: 76  ALEEDDCSILQETSDNLQRIKL---EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +            E  Q   L     DS + YLE+ AG GG E+  
Sbjct: 69  LKDSDPEMQSMARDELDAGEPELAAMEEKLQLLLLPRDPRDSQNVYLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY R++E R ++ E +    GE  G K     I+G + Y  LK E G HR+ R
Sbjct: 129 FAGDLFRMYQRYSESRGWRIEVISERPGEHGGFKEIISRIQGDDIYAHLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ + P  D   +IEI+++D R+DT+R+SGAGGQHVNTTDSAVRI
Sbjct: 189 VPETESQGRIHTSACTVAILPEPDAVEDIEINKADLRVDTFRSSGAGGQHVNTTDSAVRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+P+G+VV+CQ ERSQHKN+A+A ++L+AKL       ++  A   E  +  +G G   
Sbjct: 249 THLPSGIVVECQDERSQHKNRARAMSLLQAKLASASE--QQAAAEQAEERRNLVGTGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+      +V++GDLD  ++      +
Sbjct: 307 DRIRTYNF-PQGRVSDHRINLTLYKLDEVIEGDLDALIQPLRREYQ 351


>gi|196229467|ref|ZP_03128332.1| peptide chain release factor 1 [Chthoniobacter flavus Ellin428]
 gi|196226699|gb|EDY21204.1| peptide chain release factor 1 [Chthoniobacter flavus Ellin428]
          Length = 360

 Score =  222 bits (566), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 107/346 (30%), Positives = 175/346 (50%), Gaps = 12/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +R   L  +    +L+ +  +A+  +RE   L   ++  + +           +L
Sbjct: 7   ISKKAERFRELEAEISSSNLYDDPRKARETLREHTRLKELLANWETLNKTRAQLTENQDL 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
           A  ED   + +  +  +  ++  +   +    F  L     +  DA +E+  G GG E+ 
Sbjct: 67  AKGEDK-EMAEMAAMEIPDLEKRIADTETAVQFALLPPDPNEDRDAIVEIRGGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE   FK E LE   GE  G+K     + G   +  L+ E GVHR+ 
Sbjct: 126 LFAADLYRMYTRFAETHGFKLEPLEASVGELGGMKEVIFKVTGDQVFRTLRYESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + +++E+   + RI+  RA G GGQ VNTTDSAV+
Sbjct: 186 RVPATEAQGRIHTSTATVAVLP-EAEEVDLELKADEIRIEVCRAGGPGGQGVNTTDSAVQ 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           + HIPTG +V+CQ  RSQ KNK +A  +LR++L  LE+++REE        K +IG G  
Sbjct: 245 VMHIPTGTIVRCQDGRSQQKNKEKALTILRSRL--LEVKQREEAEKYAAQRKGQIGTGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +IR+Y   P   V D R N+   +    ++G++D+ + +  A  
Sbjct: 303 SEKIRTYNF-PQNRVTDHRINLTLYNLDSFIEGNIDEMIGSLQAAD 347


>gi|302380960|ref|ZP_07269421.1| peptide chain release factor 2 [Finegoldia magna ACS-171-V-Col3]
 gi|302311181|gb|EFK93201.1| peptide chain release factor 2 [Finegoldia magna ACS-171-V-Col3]
          Length = 329

 Score =  222 bits (566), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 155/326 (47%), Positives = 220/326 (67%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             +T     W +  +A+ +  E   + + +    EI++++ +  ++LE++ E++     +
Sbjct: 2   QQETMKAGFWDDSDKAQEIFDELNSVKDDVENYDEIEEKIEEVKMMLEISKEDNTEEYEK 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E S  L+ ++  V+  + ++LL GE D N+A + +HAGAGGTE+QDWA MLLRMYTRW  
Sbjct: 62  EISKTLKNLEKNVDEFKIQTLLVGEYDRNNAIMSIHAGAGGTEAQDWAEMLLRMYTRWIA 121

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            +K+  +  + +   E GIKS +L+++G NAYG+LK E+GVHRLVRISP+D   RRHTSF
Sbjct: 122 DKKYSYKITDYNQDTEGGIKSVSLIVQGINAYGFLKSEKGVHRLVRISPFDQQKRRHTSF 181

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S+ V+P + D+ +I+I + D +IDTYRASGAGGQHVN TDSAVRITHIPTGV VQCQ E
Sbjct: 182 ASVDVFPEIKDNHDIQIDDKDLKIDTYRASGAGGQHVNMTDSAVRITHIPTGVTVQCQTE 241

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQ  N+  A +ML AKL  ++ +++ E     +    +I WG QIRSYV QPY +VKD 
Sbjct: 242 RSQIANRKYAMDMLIAKLIMIKEEEKREKIEDIQGKYNQIAWGSQIRSYVFQPYTLVKDH 301

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLA 352
           RTN E +   DVLDGDLD F+ A L+
Sbjct: 302 RTNCESSQVQDVLDGDLDKFINAYLS 327


>gi|297172147|gb|ADI23128.1| protein chain release factor A [uncultured gamma proteobacterium
           HF0770_09E07]
          Length = 359

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 117/339 (34%), Positives = 190/339 (56%), Gaps = 7/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+  ++   L+T+  DP L  ++ +   L +E   + + +      Q+       L  L
Sbjct: 9   LDSIQKKADDLSTQLSDPKLTSDINQLTKLNKEYSEIKDVVENWNRYQELEASIEDLDTL 68

Query: 76  ALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           A +E+  S+  +E   N + ++        + L   + D  ++++E+ AGAGG E+  + 
Sbjct: 69  AKDEEMKSLALEEKDQNEKELEKIEAEIMIQLLPKDKDDERNSFVELRAGAGGDEAAIFV 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+AE+ K+K E ++       G K   + + G + YG LK E GVHR+ R+ 
Sbjct: 129 GDLYRMYGRFAERSKWKVEKIKEIPSGTGGFKEIVIKVIGADTYGNLKFESGVHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P +DD  E ++  S+ R+DTYRASGAGGQHVN TDSAVR+TH
Sbjct: 189 LTESQGRIHTSTATVAVLPEIDDIEEKDLDMSEIRVDTYRASGAGGQHVNKTDSAVRLTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +P+G+VV+CQ +RSQHKNKA+A  +L +K+Y++E QK E+        K+ +G G    +
Sbjct: 249 LPSGIVVECQDDRSQHKNKAKALGLLSSKIYDIEKQKIEQEK--ASERKSLVGTGDRSEK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   + D R  +   +    +DGD+D+ + + 
Sbjct: 307 IRTYNF-PQGRITDHRLKLTLYNIDSFIDGDIDEMLNSL 344


>gi|330444669|ref|YP_004377655.1| peptide chain release factor 1 [Chlamydophila pecorum E58]
 gi|328807779|gb|AEB41952.1| peptide chain release factor 1 [Chlamydophila pecorum E58]
          Length = 363

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 113/350 (32%), Positives = 180/350 (51%), Gaps = 13/350 (3%)

Query: 13  LFD---WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---L 66
           +FD       + RL  +  +   P ++ +  E K L +E   L        ++Q++   L
Sbjct: 1   MFDDTKLTEYLSRLEEIEVRLSSPEIFDHPEEYKALSKEHARLSELKEAYAQLQEQEKIL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGA 125
            D+   L +  + +  ++L+E     +     +    +   +     D  +  +E+ AG 
Sbjct: 61  ADDKQALSMEKDPEMIAMLEEGLVEGKAETERLRKVLENLLVPPDPDDDLNVIMELRAGT 120

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +    +RMY  ++  + +K E L   + +  G K   + I G     +L+ E 
Sbjct: 121 GGEEAALFVGDCVRMYHLYSAAKGWKYEVLSSSESDLKGYKEYVMGISGTGVKRFLQYEA 180

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HR+ R+   ++  R HTS  ++ + P   +  EI I E D RIDT+RASGAGGQHVN 
Sbjct: 181 GTHRVQRVPETETQGRVHTSAITVAILPEPAEDDEIIIDEKDLRIDTFRASGAGGQHVNV 240

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PTGVVV CQ ERSQHKNK +A  +L+A++ + E+QKR++ A+   S   +
Sbjct: 241 TDSAVRITHLPTGVVVTCQDERSQHKNKDKAMRILKARIRDAEMQKRQKEASAMRS--AQ 298

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +G G    +IR+Y       V D R  +   S   V++GDLD    A ++
Sbjct: 299 VGSGDRSERIRTYNFS-QNRVTDHRIGLTLYSLDKVMEGDLDPITTALVS 347


>gi|323698089|ref|ZP_08110001.1| peptide chain release factor 1 [Desulfovibrio sp. ND132]
 gi|323458021|gb|EGB13886.1| peptide chain release factor 1 [Desulfovibrio desulfuricans ND132]
          Length = 355

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 105/346 (30%), Positives = 171/346 (49%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72
            +   ++   L  +  +P ++ +    K + +    L   +   +  +     L DN  +
Sbjct: 5   LEEIEEKYVLLEQELAEPDIFNDQERYKKVSKAHADLSEVVEAFRRYKQLSQELDDNREM 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L  A  E       E  D    +    E  +   L     D  +  LE+ AG GG E+  
Sbjct: 65  LNDADPEIREMAKAEIDDLEGELPEIEEQLKVLLLPKDPMDEKNIILEIRAGTGGDEAAL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMYTR+AE   +K E +  +     G K     I G   Y  LK E G HR+ R
Sbjct: 125 FAADLYRMYTRYAEINHWKVEEMSANHTGSGGYKEVIASISGDKVYSKLKYESGTHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ + P   + ++I++   D R+D +R+SG GGQ VNTTDSA+R+
Sbjct: 185 VPATESQGRIHTSAVTVAIMP-EAEEVDIDLRPEDLRVDVFRSSGPGGQSVNTTDSAIRV 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIP+G++V CQ E+SQHKNKA+A  +LR++L ++E  K +       + ++++G G   
Sbjct: 244 THIPSGMIVICQDEKSQHKNKAKALKVLRSRLLQIEQDKAKAEQE--ANRRSQVGSGDRS 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+       +++G+L D   A ++  +
Sbjct: 302 ERIRTYNY-PQGRVSDHRINLTLHQLPQIMEGELQDLTDALISYFQ 346


>gi|290511305|ref|ZP_06550674.1| peptide chain release factor 2 [Klebsiella sp. 1_1_55]
 gi|289776298|gb|EFD84297.1| peptide chain release factor 2 [Klebsiella sp. 1_1_55]
          Length = 299

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 168/298 (56%), Positives = 211/298 (70%), Gaps = 1/298 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  + ++   L D   LLELA+E +D     E    L  ++ ++   +F  + SGE DS 
Sbjct: 1   MDTLDQMSQGLEDVAGLLELAVEAEDEETFNEAVAELDGLEEKLAQLEFRRMFSGEYDSA 60

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           D YL++ AG+GGTE+QDWA+ML+RMY RWAE R FKTE +E  +GE AGIKS T+ I G 
Sbjct: 61  DCYLDIQAGSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKIIGD 120

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYGWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRA
Sbjct: 121 YAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRA 180

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+   
Sbjct: 181 SGAGGQHVNRTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAE 240

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
               E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 241 KQAMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 297


>gi|320538900|ref|ZP_08038576.1| peptide chain release factor RF-1 [Serratia symbiotica str. Tucson]
 gi|320031060|gb|EFW13063.1| peptide chain release factor RF-1 [Serratia symbiotica str. Tucson]
          Length = 361

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 112/337 (33%), Positives = 173/337 (51%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +       + L RE   L +      + +    D      +
Sbjct: 9   LEALQERYEEVQALLGDAGVIAEQDRFRALSREYAQLTDVSRCFLKWRQIQGDLATAEMM 68

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   +  +E        K   +  Q   L     D    +LEV AG GG E+  +A
Sbjct: 69  QDDPEMREMAQEELKQAKATTKELEQQLQVLLLPKDPDDEGGCFLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +  ++GE  G K     + G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAETRRWRVEMISANEGEHGGYKEVIAKVSGEGVYGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P V ++   +I++SD +IDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVMPEVPEAEMPDITQSDLKIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      +V+ G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEVMAGKLDMLIQ 342


>gi|313903650|ref|ZP_07837040.1| bacterial peptide chain release factor 1 (bRF-1) [Thermaerobacter
           subterraneus DSM 13965]
 gi|313466203|gb|EFR61727.1| bacterial peptide chain release factor 1 (bRF-1) [Thermaerobacter
           subterraneus DSM 13965]
          Length = 389

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 110/346 (31%), Positives = 181/346 (52%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               + R   L  +  DP +  +    + L +ER  L+  +   +  ++   D      L
Sbjct: 38  LAARLGRFDQLERELADPAVAADPRRWQPLAQERAELEPLVEAYRRWREAAADLEAARAL 97

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQF----ESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E ++       +  ++R++ E +  +       L     D  D  +E+ AG GG E+ 
Sbjct: 98  LREAEEADERAYLAAEVERLEGERQALERALRGLLLPRDPRDQRDVIMEIRAGTGGEEAA 157

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE++ ++TE +   + +  G K     + G  A+  LK E GVHR+ 
Sbjct: 158 LFAGDLFRMYQRYAERQGWRTEIMAATESDLGGFKEIIFAVSGRGAFSRLKHESGVHRVQ 217

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + +E++I   D  IDT+ ASG GGQHVN T+SAVR
Sbjct: 218 RVPVTEAGGRIHTSTATVAVLP-EAEEVEVQIDPDDLEIDTFAASGPGGQHVNKTESAVR 276

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH PTG+VV CQ ERSQHKN+A+A  +LRA+L +   ++++E   + +  ++++G G +
Sbjct: 277 ITHKPTGIVVTCQDERSQHKNRARAMKILRARLLDYYTRRQQEE--LSQQRRSQVGTGER 334

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              IR+Y  +    V D R  +      +V+DGDLD+ + A  A  
Sbjct: 335 SEKIRTYNFR-ENRVTDHRIGLTLYRLQEVMDGDLDELLDALAAHD 379


>gi|224477106|ref|YP_002634712.1| peptide chain release factor 1 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|254790897|sp|B9DMD1|RF1_STACT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|222421713|emb|CAL28527.1| peptide chain release factor 1 [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 358

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 109/351 (31%), Positives = 185/351 (52%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  D   +R   LN    DP +  +  + +   +E+  L   +   ++ +    D   
Sbjct: 1   MFDQLDIVEERYEQLNELLSDPDVVSDSNKLREYSKEQSDLQKTVDVYRQYKQNKEDIDE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
           ++E+  E  D   +     ++  +K  +   +       +     D  +  +E+ A AGG
Sbjct: 61  IVEMLSETSDKEEVDMLKADMNELKDTLPGLEEELKMLLIPKDPNDDKNVVVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR++E   +KT  +E++D +  G K  +  I G  AY  LK E G 
Sbjct: 121 DEAAIFAGDLYRMYTRFSEGLGYKTGVIEMNDSDHGGFKEISFTINGQGAYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +E++I ++D +I+TYR+SGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EAEDVEVDIKDADLKIETYRSSGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG++     E+SQ +N+ +A  +L+A++Y+++LQ  EE        K+ +G
Sbjct: 240 SAVRITHLPTGIIATSS-EKSQIQNREKALKVLKARVYDMKLQ--EEQEKYDSERKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G LD+ + A    ++
Sbjct: 297 TGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIVEGKLDEIIDALTMSEQ 346


>gi|255020676|ref|ZP_05292738.1| Peptide chain release factor 1 [Acidithiobacillus caldus ATCC
           51756]
 gi|254969912|gb|EET27412.1| Peptide chain release factor 1 [Acidithiobacillus caldus ATCC
           51756]
          Length = 365

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 125/362 (34%), Positives = 184/362 (50%), Gaps = 15/362 (4%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           M LS +L         +   +R   L      P + Q+    +   RE   +   +  ++
Sbjct: 1   MSLSPRLEA-----QLEQLAERAEELQKALASPEIVQDNARFQAFSRELGEIQPILELLQ 55

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSND 116
             +++        EL L E D  +     ++ +  + E+   +       L     D  +
Sbjct: 56  AHEEQRQRWDEARELLLAERDPELRALAEEDQREAEAELARIEESLQVRLLPRDPNDERN 115

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
            +LE+ AG GG E+  +A  L RMYTR+AE R F    L   + E  G K   L I G  
Sbjct: 116 VFLEIRAGTGGEEAALFAADLARMYTRYAEGRGFGVTVLSSTESERGGYKEIVLEISGRG 175

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           AY  LK E G HR+ R+   +S  R HTS  ++ V P VD   EI I  SD RIDTYRAS
Sbjct: 176 AYSRLKFESGGHRVQRVPETESQGRIHTSACTVAVLPEVDAVHEIHIQPSDLRIDTYRAS 235

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQHVN TDSA+RITH+PTG+VV CQ++RSQHKN+A+A  +L+A+L  LE+ + ++ +
Sbjct: 236 GAGGQHVNKTDSAIRITHLPTGLVVACQEDRSQHKNRARAMALLQARL--LEMVREQQES 293

Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +   + ++ IG G    +IR+Y   P   + D R N+       VL G+LD  +   +  
Sbjct: 294 STAATRRSLIGSGDRSERIRTYNF-PQGRITDHRINLTIYRLEAVLAGELDALIDPLIRE 352

Query: 354 KK 355
            +
Sbjct: 353 HQ 354


>gi|159044282|ref|YP_001533076.1| peptide chain release factor 1 [Dinoroseobacter shibae DFL 12]
 gi|189039970|sp|A8LLU7|RF1_DINSH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157912042|gb|ABV93475.1| peptide chain release factor 1 [Dinoroseobacter shibae DFL 12]
          Length = 351

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 114/344 (33%), Positives = 175/344 (50%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +R  ++  +       +++     L RE   L   ++ I        D      +
Sbjct: 7   LAQITERFEYIEARMAAGAAGEDIA---ALGREYAELKPVVAEIAAYSRARADLAEAEAM 63

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +  ++ +E    L+       +  +   L    AD+  A +E+  G GG E+  +A
Sbjct: 64  LDDPEMRALAEEEIPALKARIPEMEQALRLALLPKDAADARPAMIEIRPGTGGEEAALFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE + ++ + +     E  GIK     + G   +  LK E GVHR+ R+ 
Sbjct: 124 GDLLRMYQRYAEAQGWRFQIVSESLTELGGIKEVIAHVSGSGVFAKLKYESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   ++++I+I  SD RIDT RASGAGGQHVNTTDSAVRITH
Sbjct: 184 VTESGGRIHTSAATVAVLP-EAEAVDIDIPASDIRIDTMRASGAGGQHVNTTDSAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV    E+SQH+N+  A  +LRA+LY+LE Q+    A    + K ++G G    +
Sbjct: 243 IPTGLVVTSS-EKSQHRNRDIAMQVLRARLYDLERQR--ADAERSAARKGQVGSGDRSER 299

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       V+ GDLD+ + A  A  +
Sbjct: 300 IRTYNF-PQGRMTDHRINLTLYKLDQVMQGDLDEVIAALAADDQ 342


>gi|116625721|ref|YP_827877.1| peptide chain release factor 1 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|122252101|sp|Q01RX8|RF1_SOLUE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116228883|gb|ABJ87592.1| bacterial peptide chain release factor 1 (bRF-1) [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 362

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 109/341 (31%), Positives = 172/341 (50%), Gaps = 10/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R   L  +  DP +  +  + + + + +  L +  +  +E +           +
Sbjct: 7   LDQLEKRFDELTQQMADPAVISDADQYRKVAKAQSELSDIAAKYREWKKVEDGLAQARPM 66

Query: 76  ALEEDDC-SILQETSDNLQRIKLEVEYKQF--ESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D     + E        +     ++     L     D  +  LE+ AG GG E+  
Sbjct: 67  LQEQDAELKEMAELEIAQLEPEKLRIEEELRVLLLPKDPNDDKNVVLEIRAGTGGDEATL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  + RMY+R+AE + +K E     +    G+K    L+ G   Y  LK E GVHR+ R
Sbjct: 127 FAAEIFRMYSRYAETQNWKMEVTSSSESSVGGLKEVIALVSGNKVYAKLKYESGVHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +   R HTS  ++ V P   D +E+++   D RIDT+ +SG GGQ VNTT SAVRI
Sbjct: 187 VPVTEQQGRVHTSAITVAVLP-EADEVEVKLEAKDIRIDTFCSSGPGGQSVNTTYSAVRI 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV CQ E+SQ KN+A+A  +LR++LYELEL+K++  A +G   +T +G G   
Sbjct: 246 THLPTGLVVSCQDEKSQIKNRAKAERVLRSRLYELELEKQQ--AALGAERRTMVGSGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            +IR+Y   P   V D R  +       V++G +D  + A 
Sbjct: 304 EKIRTYNF-PQNRVSDHRIGLTLHQLDFVMEGKMDAIVDAL 343


>gi|260062127|ref|YP_003195207.1| peptide chain release factor 1 [Robiginitalea biformata HTCC2501]
 gi|88783689|gb|EAR14860.1| peptide chain release factor 1 [Robiginitalea biformata HTCC2501]
          Length = 358

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 103/346 (29%), Positives = 177/346 (51%), Gaps = 12/346 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCD 68
           + D  +   QR   ++     P +  +      L +E + L   +       ++Q+R+ +
Sbjct: 1   MLDKLNIVKQRFDEVSDLIIQPDIIADQKRYIQLNKEYKDLKEIVDMREKYIQLQNRISE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGG 127
              +L    + +   + +   +  +     +E   + + +     D+ D  +E+ AG GG
Sbjct: 61  AEEILSDGSDPEMAEMAKLQLEEAREAIPPLEDAIKMKLIPKDPEDAKDVVMEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYT++ E R +KT  +++ +G   G K     + G + YG LK E GV
Sbjct: 121 DEASIFAGDLFRMYTKYCESRGWKTNVIDLSEGTSGGFKEIHFEVSGEDVYGTLKFEAGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P  +D     I   D RID + +SG GGQ VNTT 
Sbjct: 181 HRVQRVPQTETQGRVHTSAATVMVLPEAEDFDVQ-IDPKDVRIDYFCSSGPGGQSVNTTY 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+V QCQ E+SQHKNK +A+ +LR++LY++EL K++E         +++ 
Sbjct: 240 SAVRLTHVPTGIVAQCQDEKSQHKNKDKAFKVLRSRLYDMELAKKQEE--DAAKRNSQVS 297

Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            G +   IR+Y   P   V D R  +      ++++GD+   +   
Sbjct: 298 SGDRSAKIRTYNY-PQGRVTDHRIGLTLYDLQNIINGDIQKIIDEL 342


>gi|219670829|ref|YP_002461264.1| peptide chain release factor 1 [Desulfitobacterium hafniense DCB-2]
 gi|254790878|sp|B8FZ76|RF1_DESHD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219541089|gb|ACL22828.1| peptide chain release factor 1 [Desulfitobacterium hafniense DCB-2]
          Length = 355

 Score =  222 bits (565), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 109/345 (31%), Positives = 174/345 (50%), Gaps = 11/345 (3%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              +R   L     DP +  N  E +   + +  + + +   +E  + +        L  
Sbjct: 7   EIERRYDELTQLLSDPEVIGNQSEWQKYAKAQAGMTDIVEAFREYSEVVKHLEETQGLLE 66

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E+ D    +     L+ +  + +  +       L     D  +  +E+ AGAGG E+  +
Sbjct: 67  EKLDPEFKEMAELELEELTEKRDELEEKMRILLLPKDPNDDKNVIMEIRAGAGGEEAALF 126

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMYT++AE + ++TE L     +  G K    LI+G  AY  LK E GVHR+ R+
Sbjct: 127 AGDLYRMYTKYAEHQGWRTELLSASYTDIGGFKEIIFLIEGQGAYSKLKFESGVHRVQRV 186

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS +++ V P   + +++ I+ +D RID + +SG GGQ VNTT SAVRIT
Sbjct: 187 PTTESGGRIHTSTTTVAVLP-EAEEVDVAINPNDLRIDIFCSSGPGGQSVNTTQSAVRIT 245

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG VV CQ E+SQ KNK +A  +LRA+L  LE  + E +  +    ++++G G    
Sbjct: 246 HVPTGTVVSCQDEKSQLKNKEKALRVLRARL--LERAQEEAMGELASERRSQVGTGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       +L G+LD+ + A +   +
Sbjct: 304 RIRTYNF-PQGRVTDHRIGLTLHRLDSILLGELDEVINALITTDQ 347


>gi|308071169|ref|YP_003872774.1| peptide chain release factor 1 [Paenibacillus polymyxa E681]
 gi|305860448|gb|ADM72236.1| Peptide chain release factor 1 (RF-1) [Paenibacillus polymyxa E681]
          Length = 355

 Score =  222 bits (565), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 104/351 (29%), Positives = 179/351 (50%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D   +   R   L+    DP +  +  + +   +E+  L  A     E ++ + +   
Sbjct: 1   MLDRLQSLADRYDKLSELLCDPDVANDSKKLRDYSKEQSDLQPAYEAYTEYKNVVEELEA 60

Query: 72  LLELALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +  E+ D  + +     ++    R +   E  +   L     D  +  +E+   AGG
Sbjct: 61  AKTMQGEKLDDEMREMVKMEIEELSVRKRELDEKIRILLLPKDPNDDKNVIIEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+A+ + ++ E ++ +  +  G K    +I G  AY  +K E G 
Sbjct: 121 DEAALFAADLYRMYTRYADTQGWRVELMDANMNDLGGFKEVIFMINGRGAYSKMKFESGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS S++ V P   + ++IEIS+ D R+DT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRIPTTESGGRIHTSTSTVSVMP-EAEEVDIEISDKDIRVDTFCSSGAGGQSVNTTK 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG++  CQ  +SQ+ NK +A  +LRA++ ++  Q  EE A      K+++G
Sbjct: 240 SAVRVTHMPTGIMATCQDGKSQNSNKEKALQVLRARISDMLRQ--EEEAKYAGERKSKVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       V++G++++ + A    ++
Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTMHKLDQVMNGEIEEIVSALTIAEQ 347


>gi|121587849|ref|ZP_01677606.1| peptide chain release factor 2 [Vibrio cholerae 2740-80]
 gi|121728386|ref|ZP_01681414.1| peptide chain release factor 2 [Vibrio cholerae V52]
 gi|147673826|ref|YP_001216157.1| peptide chain release factor 2 [Vibrio cholerae O395]
 gi|153216950|ref|ZP_01950714.1| peptide chain release factor 2 [Vibrio cholerae 1587]
 gi|153801991|ref|ZP_01956577.1| peptide chain release factor 2 [Vibrio cholerae MZO-3]
 gi|153818695|ref|ZP_01971362.1| peptide chain release factor 2 [Vibrio cholerae NCTC 8457]
 gi|153822281|ref|ZP_01974948.1| peptide chain release factor 2 [Vibrio cholerae B33]
 gi|153826509|ref|ZP_01979176.1| peptide chain release factor 2 [Vibrio cholerae MZO-2]
 gi|153829166|ref|ZP_01981833.1| peptide chain release factor 2 [Vibrio cholerae 623-39]
 gi|227080844|ref|YP_002809395.1| peptide chain release factor 2 [Vibrio cholerae M66-2]
 gi|229505715|ref|ZP_04395225.1| peptide chain release factor 2 [Vibrio cholerae BX 330286]
 gi|229508711|ref|ZP_04398204.1| protein chain release factor B [Vibrio cholerae B33]
 gi|229512924|ref|ZP_04402391.1| peptide chain release factor 2 [Vibrio cholerae TMA 21]
 gi|229519540|ref|ZP_04408983.1| peptide chain release factor 2 [Vibrio cholerae RC9]
 gi|229520954|ref|ZP_04410376.1| peptide chain release factor 2 [Vibrio cholerae TM 11079-80]
 gi|229530470|ref|ZP_04419858.1| peptide chain release factor 2 [Vibrio cholerae 12129(1)]
 gi|229608734|ref|YP_002879382.1| protein chain release factor B [Vibrio cholerae MJ-1236]
 gi|254226529|ref|ZP_04920112.1| peptide chain release factor 2 [Vibrio cholerae V51]
 gi|255743877|ref|ZP_05417833.1| peptide chain release factor 2 [Vibrio cholera CIRS 101]
 gi|262156096|ref|ZP_06029215.1| peptide chain release factor 2 [Vibrio cholerae INDRE 91/1]
 gi|262169962|ref|ZP_06037652.1| peptide chain release factor 2 [Vibrio cholerae RC27]
 gi|262191216|ref|ZP_06049415.1| peptide chain release factor 2 [Vibrio cholerae CT 5369-93]
 gi|121547885|gb|EAX57969.1| peptide chain release factor 2 [Vibrio cholerae 2740-80]
 gi|121629320|gb|EAX61752.1| peptide chain release factor 2 [Vibrio cholerae V52]
 gi|124114015|gb|EAY32835.1| peptide chain release factor 2 [Vibrio cholerae 1587]
 gi|124122450|gb|EAY41193.1| peptide chain release factor 2 [Vibrio cholerae MZO-3]
 gi|125620933|gb|EAZ49284.1| peptide chain release factor 2 [Vibrio cholerae V51]
 gi|126510775|gb|EAZ73369.1| peptide chain release factor 2 [Vibrio cholerae NCTC 8457]
 gi|126520177|gb|EAZ77400.1| peptide chain release factor 2 [Vibrio cholerae B33]
 gi|146315709|gb|ABQ20248.1| peptide chain release factor 2 [Vibrio cholerae O395]
 gi|148875355|gb|EDL73490.1| peptide chain release factor 2 [Vibrio cholerae 623-39]
 gi|149739689|gb|EDM53896.1| peptide chain release factor 2 [Vibrio cholerae MZO-2]
 gi|227008732|gb|ACP04944.1| peptide chain release factor 2 [Vibrio cholerae M66-2]
 gi|227012488|gb|ACP08698.1| peptide chain release factor 2 [Vibrio cholerae O395]
 gi|229332243|gb|EEN97731.1| peptide chain release factor 2 [Vibrio cholerae 12129(1)]
 gi|229342187|gb|EEO07183.1| peptide chain release factor 2 [Vibrio cholerae TM 11079-80]
 gi|229344229|gb|EEO09204.1| peptide chain release factor 2 [Vibrio cholerae RC9]
 gi|229350173|gb|EEO15126.1| peptide chain release factor 2 [Vibrio cholerae TMA 21]
 gi|229354235|gb|EEO19165.1| protein chain release factor B [Vibrio cholerae B33]
 gi|229357938|gb|EEO22855.1| peptide chain release factor 2 [Vibrio cholerae BX 330286]
 gi|229371389|gb|ACQ61812.1| protein chain release factor B [Vibrio cholerae MJ-1236]
 gi|255738508|gb|EET93897.1| peptide chain release factor 2 [Vibrio cholera CIRS 101]
 gi|262021696|gb|EEY40407.1| peptide chain release factor 2 [Vibrio cholerae RC27]
 gi|262030132|gb|EEY48777.1| peptide chain release factor 2 [Vibrio cholerae INDRE 91/1]
 gi|262032918|gb|EEY51457.1| peptide chain release factor 2 [Vibrio cholerae CT 5369-93]
 gi|327483462|gb|AEA77869.1| Peptide chain release factor 2 [Vibrio cholerae LMA3894-4]
          Length = 299

 Score =  222 bits (565), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 166/297 (55%), Positives = 216/297 (72%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  I ++   + D   LLELA+E +D     E    L  ++ ++E  +F  + SG+ DS+
Sbjct: 1   MDTIDQLDRGVDDVEGLLELAIEAEDQETFDEIGPELDELEAKLEQLEFRRMFSGDHDSS 60

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           D YL++ AG+GGTE+QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G 
Sbjct: 61  DCYLDLQAGSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGD 120

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP VD++I+IEI+ +D RID YRA
Sbjct: 121 YAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRA 180

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+   
Sbjct: 181 SGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAE 240

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E +K++IGWG QIRSYVL     +KDLRT IE  +   VLDGDLD F++A+L 
Sbjct: 241 KQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDKFIEASLK 296


>gi|322434298|ref|YP_004216510.1| peptide chain release factor 1 [Acidobacterium sp. MP5ACTX9]
 gi|321162025|gb|ADW67730.1| peptide chain release factor 1 [Acidobacterium sp. MP5ACTX9]
          Length = 358

 Score =  222 bits (565), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 95/350 (27%), Positives = 164/350 (46%), Gaps = 12/350 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD       R   L+    DP L  +  + + + +E + ++  +   ++ +        
Sbjct: 1   MFDRLAQMEVRYDSLSRDMSDPVLVNDQKKFQAIAKEHRLMEPIVEKYRQYRKVADGIAE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL---LSGEADSNDAYLEVHAGAGGT 128
              +  E D         +            +   +        D  +  +E+ AG GG 
Sbjct: 61  AKAMLSESDPDLKEMAKEELASLEPQLEPIAEALKVMLLPKDPNDDKNIVIELRAGTGGD 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGV 187
           E+  +   + R+Y R AE+ ++K + L         G+K  T + +G   Y  +K E GV
Sbjct: 121 EAALFVAEMFRVYLRLAEQHRWKVQVLSESFSGIGNGLKDVTAIFEGDRVYSQMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS  ++ V P   + ++I+I   D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPATETQGRVHTSAITVAVLP-EAEEVDIKIEAKDLRVDTFCSSGPGGQSVNTTY 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SA+RITH+PT  VV CQ E+SQ KN+ +A  +LR++LYE+  + R +        K ++G
Sbjct: 240 SAIRITHLPTNTVVSCQDEKSQIKNREKAMRVLRSRLYEVAEETRHQAEAKI--RKDQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            G    +IR+Y   P   + D R  +   + + V++G L   + A +A  
Sbjct: 298 TGDRSEKIRTYNF-PQNRLTDHRIGLTNHNLNMVMEGQLQPTIDALIAHD 346


>gi|699334|gb|AAA63095.1| prfA [Mycobacterium leprae]
          Length = 357

 Score =  222 bits (565), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 116/350 (33%), Positives = 165/350 (47%), Gaps = 13/350 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L     DP L  N  EA+   R    L   ++  +++     D     EL
Sbjct: 4   IDVLLIEHAELELALADPELHSNPAEARKAGRRFARLAPIVATHRKLISARDDLQTAREL 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A  ++  +      ++                       +D  LEV +G GG ES  +A 
Sbjct: 64  AAGDESFADEIAELESRIAELTTQLTDML--APHDPHGPDDIVLEVKSGEGGEESALFAA 121

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG---------PNAYGWLKGEQG 186
            L RMY R+AE+  +    L+    +  G K ATL I              +  +K E G
Sbjct: 122 DLARMYIRYAERHGWTVTVLDETTSDLGGYKDATLAISHKGASDGDAVDGVWSRMKFEGG 181

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS + + VYP  ++  E+ I ESD RID YR+SG GGQ VNTT
Sbjct: 182 VHRVQRVPVTESQGRVHTSAAGVLVYPEPEEIGEVHIDESDLRIDVYRSSGKGGQGVNTT 241

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE- 305
           DSAVRITH+PTGVVV CQ ERSQ +NK +A  +L A+L  +  ++    A+   +S+   
Sbjct: 242 DSAVRITHLPTGVVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALANASADRASQIRT 301

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +    +IR+Y   P   + D R   +  +   VLDGDLD    A  A  K
Sbjct: 302 VDRSERIRTYNF-PENRITDHRIGYKAHNLDQVLDGDLDALFDALSAADK 350


>gi|229087819|ref|ZP_04219935.1| Peptide chain release factor 1 [Bacillus cereus Rock3-44]
 gi|228695494|gb|EEL48363.1| Peptide chain release factor 1 [Bacillus cereus Rock3-44]
          Length = 358

 Score =  222 bits (565), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 117/347 (33%), Positives = 182/347 (52%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
                 R   LN    DP +  +  + +   +E+  + + +   +E +D   +L D   +
Sbjct: 8   LQAVEDRYEKLNELLSDPEIISDSNKLREYSKEQSDIQDTVEVYREYKDVREQLRDAKAM 67

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LE  L+ +   +++E    L+  + E+  + +   +     D  +  +EV   AGG E+ 
Sbjct: 68  LEEKLDAEMRDMVKEEVSELEGQEKELSERLKILLVPKDPNDDKNVIVEVRGAAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E G HR+ 
Sbjct: 128 LFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VNTT SAVR
Sbjct: 188 RVPETESGGRIHTSTATVAVLP-EAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTMSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K  +G G  
Sbjct: 247 LTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 305 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350


>gi|313676496|ref|YP_004054492.1| bacterial peptide chain release factor 1 (brf-1) [Marivirga
           tractuosa DSM 4126]
 gi|312943194|gb|ADR22384.1| bacterial peptide chain release factor 1 (bRF-1) [Marivirga
           tractuosa DSM 4126]
          Length = 355

 Score =  222 bits (565), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 108/348 (31%), Positives = 169/348 (48%), Gaps = 8/348 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  +   +R   +      P    ++ +   L +E   L+  +         L D   
Sbjct: 1   MLDRLERMKERFQEVGQLMVQPDAMADMKKFTELSKEYADLEKVVEVYDAYTKVLDDIKQ 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
              +   E +    +      + +K E +  + E           DS +A LE+ AG GG
Sbjct: 61  AKNILENEKEPEFREMAKMEWEELKPERDRLEEELKKMLIPKDPNDSKNAVLEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L +MY R+ +K       L++  G   G K     + G NAYG LK E GV
Sbjct: 121 DEAAIFAGDLFKMYQRFCDKNGLNLTVLDLTFGTAGGYKEIISTVTGKNAYGTLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P   D +E+EI  +D R DTY +SG GGQ VNTT 
Sbjct: 181 HRVQRVPQTETQGRVHTSAATVAVLP-EIDDVEVEIDMNDVRKDTYCSSGPGGQSVNTTY 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+VV CQ ++SQ KN  +A  +LR++LYE+EL K+ E       S    G
Sbjct: 240 SAVRLTHEPTGLVVTCQDQKSQIKNFDKALRVLRSRLYEIELAKQNEEVGAQRRSIVRSG 299

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               +IR+Y   P   V D R N    +  ++++G+++D ++     +
Sbjct: 300 DRSDKIRTYNY-PQGRVTDHRINYTVHNLPNIMNGEIEDLIENLQIAE 346


>gi|116494651|ref|YP_806385.1| peptide chain release factor 1 [Lactobacillus casei ATCC 334]
 gi|191638150|ref|YP_001987316.1| peptide chain release factor 1 [Lactobacillus casei BL23]
 gi|227535366|ref|ZP_03965415.1| peptide chain release factor RF1 [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239631748|ref|ZP_04674779.1| peptide chain release factor 1 [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|301066209|ref|YP_003788232.1| protein chain release factor A [Lactobacillus casei str. Zhang]
 gi|122263928|sp|Q03A29|RF1_LACC3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238693030|sp|B3WDK7|RF1_LACCB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116104801|gb|ABJ69943.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
           casei ATCC 334]
 gi|190712452|emb|CAQ66458.1| Peptide chain release factor 1 (RF-1) [Lactobacillus casei BL23]
 gi|227186962|gb|EEI67029.1| peptide chain release factor RF1 [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239526213|gb|EEQ65214.1| peptide chain release factor 1 [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|300438616|gb|ADK18382.1| Protein chain release factor A [Lactobacillus casei str. Zhang]
 gi|327382180|gb|AEA53656.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
           casei LC2W]
 gi|327385377|gb|AEA56851.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
           casei BD-II]
          Length = 359

 Score =  222 bits (565), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 108/352 (30%), Positives = 179/352 (50%), Gaps = 12/352 (3%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            +F+  D  + R   L     DP +  +      L +E   + + ++  K+ +  L D  
Sbjct: 3   KIFEQLDGLLDRYEELQELMSDPEVISDTKRYLALSKEEGGMRDVVAAYKKYKQVLSDIK 62

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAG 126
              E+  E  D  +     ++L+ ++ +    +       L     D  +  +E+   AG
Sbjct: 63  ESEEVLRESKDDDMEALAKEDLEDLQKQKADLEDQIKVLMLPKDPNDDKNIIMEIRGAAG 122

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  LL MY  +AE++ +KTE ++    E  G K   ++I G N Y  LK E G
Sbjct: 123 GDEASLFAGDLLNMYMHYAERQGWKTEIIDATPTEVGGYKEVVVMITGDNVYSKLKYENG 182

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P   D ++++I   D R D YR+SGAGGQHVN T
Sbjct: 183 AHRVQRVPVTESAGRVHTSTATVGVMP-EYDEVDLKIDPKDIRTDVYRSSGAGGQHVNKT 241

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+THIP+G+VV  Q ERSQ +N+A+A  +LR+++Y+    + +E     ++ K  I
Sbjct: 242 SSAVRMTHIPSGIVVSMQDERSQQENRARAMQILRSRVYDYYETQNQE--KYDQNRKNAI 299

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       +++G+LD+ + A +   +
Sbjct: 300 GTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIIDALIVHDQ 350


>gi|332829242|gb|EGK01896.1| peptide chain release factor 1 [Dysgonomonas gadei ATCC BAA-286]
          Length = 361

 Score =  222 bits (565), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 103/346 (29%), Positives = 171/346 (49%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   +     DP +  ++     L +E + L+       E +  L +      +
Sbjct: 10  LDTLVMRFEEIGKLITDPSVIADMKRYVKLNKEYRDLEKISIARNEYKQLLTNVEEAKNI 69

Query: 76  ALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E+D  + +   +       R+    E  +   + +   DS +A +E+  G GG E+ 
Sbjct: 70  LDSENDAELREMAREELDTANVRLPELEEEIKLLLVPADPEDSKNAIVEIRGGTGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + ++TE   + +G   G K     + G   YG LK E GVHR+ 
Sbjct: 130 IFAGDLYRMYIKYCELKGWRTEITSLTEGTSGGYKEVIFTVTGEGVYGILKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + +++EI+ +D  + T R+SGAGGQ+VN  ++ V+
Sbjct: 190 RVPATETQGRVHTSAATVAVLP-EAEEVDVEINPADIEMQTARSSGAGGQNVNKVETKVQ 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +TH P+G+VV CQQ RSQ  N+  A  MLR KLY++EL K +    I    KT +  G +
Sbjct: 249 LTHKPSGLVVVCQQARSQLANRELAMQMLRTKLYDIELSKYQAE--IASKRKTMVSTGDR 306

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              IR+Y   P   V D R N+   + S V+DG++   +   +  +
Sbjct: 307 SAKIRTYNY-PQGRVTDHRINLTLYNLSGVMDGEIQPIIDQLIIAE 351


>gi|282882091|ref|ZP_06290732.1| peptide chain release factor 1 [Peptoniphilus lacrimalis 315-B]
 gi|281298121|gb|EFA90576.1| peptide chain release factor 1 [Peptoniphilus lacrimalis 315-B]
          Length = 358

 Score =  222 bits (565), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 110/343 (32%), Positives = 173/343 (50%), Gaps = 11/343 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
             R + L     D ++  N    +    E   L   +S  +E +    +      L  E+
Sbjct: 9   EDRYNELEKSLMDINVINNSSLYQKTAIEHAELQPIVSKYREYKKTKENLNDSKALLAEK 68

Query: 80  DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
            D  +     D++   +  +E  +       +     D  +  +E+ AGAGG E+  +A 
Sbjct: 69  LDDDMKDLVKDDISTNEKNLEKIEEDLKILLIPKDPNDKKNVMVEIRAGAGGDEAALFAG 128

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L R Y R+AE+  +K + +  ++    G K    +I G  AY  LK E GVHR+ R+  
Sbjct: 129 TLFRQYVRYAERCGWKVDIISTNEIGIGGYKEVVFMIIGRGAYSRLKYESGVHRVQRVPE 188

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS +++ V P   + +E+EI  ++ + D +RASG GGQ VNTTDSAVR+THI
Sbjct: 189 TESGGRIHTSTATVAVLP-EVEDVEVEIDPTEIKFDVFRASGNGGQCVNTTDSAVRLTHI 247

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTG+V+ CQ E+SQ  NK +A  +LRAKLY+L++Q++ E         +++G G    +I
Sbjct: 248 PTGIVISCQDEKSQLMNKEKAMKLLRAKLYDLKIQEQNE--KNSAQRLSQVGTGDRSERI 305

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R+Y   P   V D R N        + DG+LD+ + A  A  +
Sbjct: 306 RTYNY-PQGRVTDHRINYTTHQIVSINDGELDELIDALTAADQ 347


>gi|169825227|ref|YP_001692838.1| peptide chain release factor B [Finegoldia magna ATCC 29328]
 gi|167832032|dbj|BAG08948.1| peptide chain release factor B [Finegoldia magna ATCC 29328]
          Length = 324

 Score =  222 bits (565), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 154/319 (48%), Positives = 218/319 (68%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
             W +  +A+ +  E   + + +    EI++++ +  ++LE++ E++     +E S  L+
Sbjct: 4   GFWDDSDKAQEIFDELNSVKDDVENYDEIEEKIEEVKMMLEISKEDNTEEYEKEISKTLK 63

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            ++  V+  + ++LL GE D N+A + +HAGAGGTE+QDWA MLLRMYTRW   +K+  +
Sbjct: 64  NLEKNVDEFKIKTLLVGEYDRNNAIMSIHAGAGGTEAQDWAEMLLRMYTRWIADKKYSYK 123

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
             + +   E GIKS +L+++G NAYG+LK E+GVHRLVRISP+D   RRHTSF+S+ V+P
Sbjct: 124 ITDYNQDTEGGIKSVSLIVQGINAYGFLKSEKGVHRLVRISPFDQQKRRHTSFASVDVFP 183

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
            + D+ +I+I + D +IDTYRASGAGGQHVN TDSAVRITHIPTGV VQCQ ERSQ  N+
Sbjct: 184 EIKDNHDIQIDDKDLKIDTYRASGAGGQHVNMTDSAVRITHIPTGVTVQCQTERSQIANR 243

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
             A +ML AKL  ++ +++ E     +    +I WG QIRSYV QPY +VKD RTN E +
Sbjct: 244 KYAMDMLIAKLIMIKEEEKREKIEDIQGKYNQIAWGSQIRSYVFQPYTLVKDHRTNCESS 303

Query: 334 SPSDVLDGDLDDFMKATLA 352
              DVLDGDLD F+ A L+
Sbjct: 304 QVQDVLDGDLDKFINAYLS 322


>gi|163783081|ref|ZP_02178076.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881761|gb|EDP75270.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 361

 Score =  222 bits (565), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 122/345 (35%), Positives = 180/345 (52%), Gaps = 10/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72
            +   ++   +  +   P + Q+V   + L RE + L       +E +     L +   L
Sbjct: 10  LEKLTEKYKRIEEELSKPEVIQDVKRYRELSREHKELAELYETYQEYKRLQRELNEAKEL 69

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L+   +E      +E  D   RI    E  +   +     DS +  LE+ AG GG E+  
Sbjct: 70  LKSPEKELKELAQEEIEDIQSRIPELEEKLKLLLVPKDPNDSKNVILEIRAGTGGEEAAL 129

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +   LLRMY ++AE + +K   L  +     G K    LI+G  AY  LK E GVHR+ R
Sbjct: 130 FVADLLRMYQKYAEDKGWKFSILNANKTGLGGYKEVIALIEGEGAYSRLKYESGVHRVQR 189

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           I   +S  R HTS +++ V P  D++    I+  D +I+T+RASGAGGQ+VNTT++AVRI
Sbjct: 190 IPVTESGGRIHTSTATVAVLPEADEADVE-INPQDLKIETFRASGAGGQYVNTTETAVRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311
           TH PTG+VV CQ ERSQ +NK +A  +L AKL +   +K+ E   I    K ++G G + 
Sbjct: 249 THTPTGIVVSCQDERSQFQNKQKALKILYAKLKDFYERKKREE--IARERKEQVGTGERS 306

Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             IR+Y   P   V D R N+     +DVL+G LD+F+ A  A +
Sbjct: 307 EKIRTYNF-PQNRVTDHRVNLTLYKLNDVLEGKLDEFIDALRAKE 350


>gi|298529663|ref|ZP_07017066.1| peptide chain release factor 1 [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298511099|gb|EFI35002.1| peptide chain release factor 1 [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 356

 Score =  222 bits (565), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 112/341 (32%), Positives = 177/341 (51%), Gaps = 10/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   Q+   + T   DP ++ N  + + L +    L   +S  +E +  + +     EL
Sbjct: 5   LDELEQQYMQIETDLSDPEVFSNQEKYRKLSKSHSELGPIVSTYREYRRIVSEMEENREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYLEVHAGAGGTESQD 132
           A + D        ++     + +   ++    + + S   D  +  LE+ AG GG E+  
Sbjct: 65  ARDRDPEIRELAQAELETLQEEKDRLEEDLKIQLVPSDPLDDKNIILEIRAGTGGEEAAL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY R+AE+R +K E L + +    GIK     I G   Y  LK E GVHR+ R
Sbjct: 125 FAADLFRMYFRYAEERSWKVEVLNMQETGTGGIKEVIASISGKKVYSRLKYESGVHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ + P   + +++ I  +D R+D +RASG GGQ VNTTDSAVRI
Sbjct: 185 VPETESQGRVHTSAVTVAILP-EAEEVDVNIEPNDLRVDVFRASGPGGQSVNTTDSAVRI 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV CQ E+SQHKN+A+A  +LR++L ++  +  E+     ++ + ++G G   
Sbjct: 244 THIPTGLVVSCQDEKSQHKNRAKALKVLRSRLLQIMEE--EQKREYDDNRRAQVGSGDRS 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            +IR+Y   P   V D R N+   +   V+ G LD  +   
Sbjct: 302 ERIRTYNF-PQSRVTDHRINLTLYNLESVMQGHLDGIIDPL 341


>gi|313203258|ref|YP_004041915.1| bacterial peptide chain release factor 1 (brf-1) [Paludibacter
           propionicigenes WB4]
 gi|312442574|gb|ADQ78930.1| bacterial peptide chain release factor 1 (bRF-1) [Paludibacter
           propionicigenes WB4]
          Length = 361

 Score =  222 bits (565), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 110/346 (31%), Positives = 175/346 (50%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    +   ++T   DP +  +      L +E   L+  ++   E +  L       EL
Sbjct: 10  LEGLQHKFEEISTLITDPSVITDQKRFVKLNKEYHDLEMILNAKNEYEMALAHLAEAKEL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +     +  I+  +   +       + +   D+ +A +E+  G GG E+ 
Sbjct: 70  LDTESDPEMREMAKAEVDSIEPIIPEMEENIKLLLIPADPEDNKNAIVEIRGGTGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MYT++ E + ++ E   I +G   G K     + G N YG LK E GVHR+ 
Sbjct: 130 IFAGDLFKMYTKYCETKGWRLEITNISEGTAGGYKEIIFTVTGENVYGTLKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P +++    E+ ESD R+DT+ +SGAGGQ VNTT SA+R
Sbjct: 190 RVPQTETQGRVHTSAATVAVLPEMEEFD-YELKESDVRVDTFCSSGAGGQSVNTTYSAIR 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           + HIPTG  VQCQ E+SQHKNKA+A N LR++LY +E QK  +   IG   KT +  G +
Sbjct: 249 LVHIPTGTTVQCQDEKSQHKNKAKAMNELRSRLYAIEHQKYLDE--IGSKRKTMVSTGDR 306

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              IR+Y   P   + D R N    + S  + GD+   +   +  +
Sbjct: 307 SAKIRTYNY-PQGRITDHRINFTIYNLSAFMGGDIQGVIDQLIVAE 351


>gi|258592988|emb|CBE69299.1| peptide chain release factor 1 [NC10 bacterium 'Dutch sediment']
          Length = 358

 Score =  222 bits (565), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 20/362 (5%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           ++L  +L         D   QR + +  +  DP +  +    + L +    L+  +   +
Sbjct: 2   LQLRERL---------DAIEQRSTEVLLQMGDPAIITDQARFQRLAKAHAELEPVVEAYQ 52

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSND 116
           + +  L D      L  +  +  + +     L+    + +   E      L    AD   
Sbjct: 53  QYRKLLQDLEETKALLHDGTEDDVRELAEAELKELAVKREKLEEELTLLLLPRDPADEKS 112

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             LEV AGAGG E+  +A  L+RMY R+AE R +K E L        G+K A L I+G  
Sbjct: 113 IILEVRAGAGGDEAALFAAELVRMYGRYAELRGWKVEMLSSSQTGVGGVKEAILSIEGRG 172

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           AY  LK E GVHR+ R+   +S+ R HTS  ++ V P   + +EI+I   D RID +R++
Sbjct: 173 AYSRLKFESGVHRVQRVPVTESSGRIHTSTVTVAVLP-EAEDVEIQIDPKDLRIDVFRST 231

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ VNTTDSAVRITH+PTG+VV CQ E+SQHKN+A+A  +LRA+L  LE    ++ A
Sbjct: 232 GPGGQSVNTTDSAVRITHLPTGMVVSCQDEKSQHKNRAKAMKVLRARL--LEAATAQQAA 289

Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            I ++ + ++G G    +IR+Y   P   V D R  +   S   +L+G++++ + A  A 
Sbjct: 290 EISQARRQQVGTGDRSERIRTYNF-PQGRVTDHRIGLTLHSLPRILEGEIEELIGALAAS 348

Query: 354 KK 355
            +
Sbjct: 349 DQ 350


>gi|284007355|emb|CBA72733.1| peptide chain release factor 1 [Arsenophonus nasoniae]
          Length = 349

 Score =  222 bits (565), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 113/337 (33%), Positives = 174/337 (51%), Gaps = 7/337 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             +R   +     D  +  +    + L +E   L +     +  +    D      L  +
Sbjct: 1   MQERYEEIQAHLVDAEVIADQERFRALSKEYAQLTDVTKCFQSWRAVQQDIETAETLLHD 60

Query: 79  EDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
            +   + QE      +R +   +  Q   L     D  + +LE+ AG GG E+  +A  L
Sbjct: 61  PEMREMAQEELKEAKKRNEEFEQQLQILLLPKDPDDEKNCFLEIRAGTGGDEAAIFAGDL 120

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY R+AE R+++ E +   +GE  G K     + G + YG LK E G HR+ R+   +
Sbjct: 121 FRMYNRYAESRRWRIEVMNASEGEHGGYKEIIAKVSGDSVYGRLKFESGGHRVQRVPETE 180

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  R HTS  ++ +   +  +   +I+ SD RIDT+R+SGAGGQHVNTTDSA+RITHIPT
Sbjct: 181 SQGRIHTSACTVAILAEIPATELPDINPSDLRIDTFRSSGAGGQHVNTTDSAIRITHIPT 240

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314
           G+VV+CQ ERSQHKNKA+A ++L A++   E+QKR E        +  +G G    +IR+
Sbjct: 241 GIVVECQDERSQHKNKAKALSVLAARIRAAEVQKRRE--AEASERRNLLGSGDRSDRIRT 298

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           Y   P   + D R N+      +V++G LD  ++  +
Sbjct: 299 YNF-PQGRITDHRINLTLYRLDEVIEGKLDMLIQPII 334


>gi|325291372|ref|YP_004267553.1| bacterial peptide chain release factor 1 (bRF-1) [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324966773|gb|ADY57552.1| bacterial peptide chain release factor 1 (bRF-1) [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 356

 Score =  222 bits (565), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 185/347 (53%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
            +   ++   +     +P ++ +    +   + +  +   +   +E ++   +L D   L
Sbjct: 5   LEEIEKKYDEITELLSNPEIFSDQAAYQKNAKAQAAIAEIVEGFREYKEIFRQLKDAQAL 64

Query: 73  LELALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LE  L+ +     Q   D    R +   E  +   L     D  +  +E+ AGAGG E+ 
Sbjct: 65  LEEELDSEMREFAQSEIDELQNRKEEYEEKLKILLLPKDPNDEKNVIMEIRAGAGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MY+R+AE++ +KTE L     +  G K    +++G  AY  LK E GVHR+ 
Sbjct: 125 LFAGDLYKMYSRYAEEQGWKTEMLSASYTDIGGFKEIIFMVEGRGAYSMLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + ++IEI+ ++ RID + +SG GGQ VNTT SAVR
Sbjct: 185 RIPSTESGGRIHTSTATVAVLP-EAEDVDIEINPNEIRIDIFCSSGPGGQSVNTTQSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+VV CQ E+SQHKNK +A  +LRA+L  LE  ++E +  I +  K+++G G  
Sbjct: 244 VTHIPTGIVVSCQDEKSQHKNKDKALKVLRARL--LEKAQQEAMGEIAQERKSQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +      ++L GD+ + + A +A  +
Sbjct: 302 SERIRTYNF-PQGRVSDHRIGLTLHKLENILLGDIQEIIDALIAKDQ 347


>gi|332653076|ref|ZP_08418821.1| peptide chain release factor 1 [Ruminococcaceae bacterium D16]
 gi|332518222|gb|EGJ47825.1| peptide chain release factor 1 [Ruminococcaceae bacterium D16]
          Length = 354

 Score =  222 bits (565), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 100/344 (29%), Positives = 168/344 (48%), Gaps = 8/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 + S +  +      +++      L +E+  L   +   +        +L    L
Sbjct: 5   LAAIEAKYSQIEARLSASETYEDPALVAKLNKEQTELQPLVETYRTYLRTQQSHLEAESL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE     +          +   L     D  +  +E+ AG GG E+  +A
Sbjct: 65  LSDPEMKELAQEEWRQSKEDLERLEHQLKILLLPKDPNDDKNVIVEIRAGVGGEEAALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           + L RMY+ +AE   +KTE   + + E  G+K  +  I+G  AY  LK E GVHR+ R+ 
Sbjct: 125 HSLYRMYSMFAEANHWKTEVDSVSETELGGVKEISFTIEGDGAYSRLKFESGVHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P ++ +    I+ +D  +  +R+SGAGGQHVN T SAVR+ H
Sbjct: 185 ETESGGRVHTSTVTVAVLPEMETADVQ-INPADIEMQVFRSSGAGGQHVNKTSSAVRLIH 243

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            PTG VV+CQQERSQ +N+ +A  +L ++LYE E +K    +      ++++G G    +
Sbjct: 244 KPTGTVVECQQERSQFQNRDKAMRILASRLYEAEQEKI--SSEYTAQRRSQVGSGMRNER 301

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R  +      ++++GDL++ + A  A  +
Sbjct: 302 IRTYNF-PQGRVTDHRIGLTLYKIDNIMNGDLNEVIDALAAADQ 344


>gi|294782570|ref|ZP_06747896.1| peptide chain release factor 1 [Fusobacterium sp. 1_1_41FAA]
 gi|294481211|gb|EFG28986.1| peptide chain release factor 1 [Fusobacterium sp. 1_1_41FAA]
          Length = 357

 Score =  222 bits (565), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 120/351 (34%), Positives = 184/351 (52%), Gaps = 11/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +  V R   LN     P +  +  +     +    +   +   KE +  + D   
Sbjct: 1   MFDKLEEVVARYEELNQMLVSPEVLADSKKMIECNKAINEITEIVEKYKEYKKYVDDIEF 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGG 127
           + E    E D  + +  ++ L+  + ++       +   L   + D  +  +E+  GAGG
Sbjct: 61  IKESFKTEKDADMKEMLNEELKEAEEKLPSLEEELKILLLPKDKNDDKNVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE+RK+K E +E  DGE  G+K     I G  AY  LK E GV
Sbjct: 121 DEAALFAADLFRMYSRYAERRKWKIEIIEKQDGELNGLKEVAFTIIGLGAYSRLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +++ R HTS +++ V P V+D  E+ +   D +IDTYR+ GAGGQHVN TD
Sbjct: 181 HRVQRVPKTEASGRIHTSTATVAVLPEVEDIQEVIVDPKDLKIDTYRSGGAGGQHVNMTD 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VVQCQ ERSQ KN+ +A   L  KLYE+E +K+          + ++G
Sbjct: 241 SAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQRSEVE--SERRLQVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   + D R  +        LDGD+D+ + A +   +
Sbjct: 299 TGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQ 348


>gi|229076544|ref|ZP_04209504.1| Peptide chain release factor 1 [Bacillus cereus Rock4-18]
 gi|229099762|ref|ZP_04230687.1| Peptide chain release factor 1 [Bacillus cereus Rock3-29]
 gi|229105922|ref|ZP_04236546.1| Peptide chain release factor 1 [Bacillus cereus Rock3-28]
 gi|229118825|ref|ZP_04248174.1| Peptide chain release factor 1 [Bacillus cereus Rock1-3]
 gi|228664626|gb|EEL20119.1| Peptide chain release factor 1 [Bacillus cereus Rock1-3]
 gi|228677496|gb|EEL31749.1| Peptide chain release factor 1 [Bacillus cereus Rock3-28]
 gi|228683651|gb|EEL37604.1| Peptide chain release factor 1 [Bacillus cereus Rock3-29]
 gi|228706577|gb|EEL58790.1| Peptide chain release factor 1 [Bacillus cereus Rock4-18]
          Length = 358

 Score =  221 bits (564), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 117/347 (33%), Positives = 179/347 (51%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
                 R   LN    DP +  +  + +   +E+  +   +   +E +D   +L D   +
Sbjct: 8   LQAVEDRYEKLNELLSDPEVISDTNKLREYSKEQSDMQETVEVYREYKDVREQLRDAKAM 67

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LE  L+ D   +++E    L+  +  +  + +   +     D  +  +EV   AGG E+ 
Sbjct: 68  LEDKLDADMREMVKEEVSELEGQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E G HR+ 
Sbjct: 128 LFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EI I E D R+DT+ +SG GGQ VNTT SAVR
Sbjct: 188 RVPETESGGRIHTSTATVAVLP-EAEEVEITIHEKDVRVDTFASSGPGGQSVNTTMSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K  +G G  
Sbjct: 247 LTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 305 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350


>gi|206580278|ref|YP_002237908.1| peptide chain release factor 1 [Klebsiella pneumoniae 342]
 gi|288934821|ref|YP_003438880.1| peptide chain release factor 1 [Klebsiella variicola At-22]
 gi|290508964|ref|ZP_06548335.1| peptide chain release factor 1 [Klebsiella sp. 1_1_55]
 gi|238058716|sp|B5XW51|RF1_KLEP3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|206569336|gb|ACI11112.1| peptide chain release factor 1 [Klebsiella pneumoniae 342]
 gi|288889530|gb|ADC57848.1| peptide chain release factor 1 [Klebsiella variicola At-22]
 gi|289778358|gb|EFD86355.1| peptide chain release factor 1 [Klebsiella sp. 1_1_55]
          Length = 360

 Score =  221 bits (564), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 111/337 (32%), Positives = 175/337 (51%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +  + + L RE   L +      + +    D      +
Sbjct: 9   LEALYERHEEVQALLGDAATIADQDKFRALSREYAQLSDVARCYTDWRQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE   + +       +  Q   L     D  +A++EV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQEELRDAKEKGDQLEQQLQVLLLPKDPDDERNAFVEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E L  ++GE  G K       G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESRRWQVEILSANEGEHGGFKEVIAKFSGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAEMPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      + ++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIE 342


>gi|153874211|ref|ZP_02002515.1| Peptide chain release factor 1 [Beggiatoa sp. PS]
 gi|152069325|gb|EDN67485.1| Peptide chain release factor 1 [Beggiatoa sp. PS]
          Length = 361

 Score =  221 bits (564), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 180/347 (51%), Gaps = 10/347 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N   RL  LN    +P +  N  + + L +E   +   +    + +         +E+
Sbjct: 9   LENLSDRLQELNVLLTEPEIINNQNQFRSLSKEYAEIQPIVECFDKYRQNSETQATAIEM 68

Query: 76  ALEEDDCSILQETS---DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             +ED                  +      Q   L     D+++ +LEV AG GG E+  
Sbjct: 69  LRDEDADMRALAEEELSQAQTENERLDNELQLLLLPKDPDDNSNTFLEVRAGTGGDEAAL 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L+RMY+R+AE++ ++ E L  + GE  G K   + I G   Y   K E G HR+ R
Sbjct: 129 FAGDLVRMYSRYAEQQNWQIEILSQNHGEHGGFKEIIMRITGEGVYSRFKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ + P V++  EIEI+ +D R DT+RASGAGGQHVN TDSA+R+
Sbjct: 189 VPETESQGRIHTSACTVAIMPEVEEVEEIEINNADIREDTFRASGAGGQHVNKTDSAIRL 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+V++CQ ERSQHKN+A+A ++L+A+L   E +++       E+ +  +G G   
Sbjct: 249 THLPTGIVIECQDERSQHKNRARAKSLLQARLLAAERERQRAEK--AETRRNLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R  +      D+L  G+LDD ++      +
Sbjct: 307 ERIRTYNF-PQGRITDHRIGLTLYKLDDILKQGNLDDLIEPLKREHQ 352


>gi|157960584|ref|YP_001500618.1| peptide chain release factor 2 [Shewanella pealeana ATCC 700345]
 gi|157845584|gb|ABV86083.1| peptide chain release factor 2 [Shewanella pealeana ATCC 700345]
          Length = 293

 Score =  221 bits (564), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 155/291 (53%), Positives = 206/291 (70%), Gaps = 1/291 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+EE+D     + +  LQ ++  +E  +F  + S   D++D YL++
Sbjct: 1   MDSGLEDIEGLLELAVEENDEETFNDAAAELQGLEKRLEELEFRRMFSKPHDASDCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GGTE+QDWANM+LRM+ RW E   +K E +E+  G+ AGIK AT+   G  A+G L
Sbjct: 61  QSGSGGTEAQDWANMVLRMFLRWGEAHDYKPELIEVTAGDVAGIKGATIKFTGEYAFGSL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SA+RITH+PT  VVQCQ +RSQHKN+  A   L+AKLYELE+ K+       E 
Sbjct: 181 HVNKTESAIRITHLPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNADKQAAED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 241 AKSDIGWGSQIRSYVLDD-ARIKDLRTGVENRNTQSVLDGDLDKFIEASLK 290


>gi|30023360|ref|NP_834991.1| peptide chain release factor 1 [Bacillus cereus ATCC 14579]
 gi|206970257|ref|ZP_03231210.1| peptide chain release factor 1 [Bacillus cereus AH1134]
 gi|218236058|ref|YP_002370106.1| peptide chain release factor 1 [Bacillus cereus B4264]
 gi|228924065|ref|ZP_04087341.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228955577|ref|ZP_04117579.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228961593|ref|ZP_04123202.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|229051000|ref|ZP_04194549.1| Peptide chain release factor 1 [Bacillus cereus AH676]
 gi|229072796|ref|ZP_04205995.1| Peptide chain release factor 1 [Bacillus cereus F65185]
 gi|229082544|ref|ZP_04215007.1| Peptide chain release factor 1 [Bacillus cereus Rock4-2]
 gi|229112743|ref|ZP_04242276.1| Peptide chain release factor 1 [Bacillus cereus Rock1-15]
 gi|229130579|ref|ZP_04259535.1| Peptide chain release factor 1 [Bacillus cereus BDRD-Cer4]
 gi|229147870|ref|ZP_04276211.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST24]
 gi|229153493|ref|ZP_04281671.1| Peptide chain release factor 1 [Bacillus cereus m1550]
 gi|229181577|ref|ZP_04308903.1| Peptide chain release factor 1 [Bacillus cereus 172560W]
 gi|229193581|ref|ZP_04320525.1| Peptide chain release factor 1 [Bacillus cereus ATCC 10876]
 gi|29898921|gb|AAP12192.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bacillus cereus
           ATCC 14579]
 gi|206734834|gb|EDZ52003.1| peptide chain release factor 1 [Bacillus cereus AH1134]
 gi|218164015|gb|ACK64007.1| peptide chain release factor 1 [Bacillus cereus B4264]
 gi|228589886|gb|EEK47761.1| Peptide chain release factor 1 [Bacillus cereus ATCC 10876]
 gi|228601945|gb|EEK59440.1| Peptide chain release factor 1 [Bacillus cereus 172560W]
 gi|228630097|gb|EEK86748.1| Peptide chain release factor 1 [Bacillus cereus m1550]
 gi|228635520|gb|EEK92009.1| Peptide chain release factor 1 [Bacillus cereus BDRD-ST24]
 gi|228652918|gb|EEL08800.1| Peptide chain release factor 1 [Bacillus cereus BDRD-Cer4]
 gi|228670724|gb|EEL26035.1| Peptide chain release factor 1 [Bacillus cereus Rock1-15]
 gi|228700976|gb|EEL53499.1| Peptide chain release factor 1 [Bacillus cereus Rock4-2]
 gi|228710287|gb|EEL62262.1| Peptide chain release factor 1 [Bacillus cereus F65185]
 gi|228722377|gb|EEL73773.1| Peptide chain release factor 1 [Bacillus cereus AH676]
 gi|228798075|gb|EEM45079.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228804105|gb|EEM50722.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228835555|gb|EEM80920.1| Peptide chain release factor 1 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 358

 Score =  221 bits (564), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 179/347 (51%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
                 R   LN    DP +  +  + +   +E+  +   +   +E +D   +L D   +
Sbjct: 8   LQAVENRYEKLNELLSDPAIISDSNKLREYSKEQSDIQETVEVYREYKDVREQLKDAKAM 67

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LE  L+ +   +++E    L+     +  + +   +     D  +  +EV   AGG E+ 
Sbjct: 68  LEDKLDAEMREMVKEEVSELESQDKTLSERLKILLVPKDPNDDKNVIVEVRGAAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E G HR+ 
Sbjct: 128 LFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VNTT SAVR
Sbjct: 188 RVPETESGGRIHTSTATVAVLP-EAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTMSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K  +G G  
Sbjct: 247 LTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 305 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350


>gi|205352556|ref|YP_002226357.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|238690491|sp|B5R924|RF1_SALG2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|205272337|emb|CAR37217.1| Peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326627616|gb|EGE33959.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 360

 Score =  221 bits (564), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 113/337 (33%), Positives = 177/337 (52%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE      ++ +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E + + +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A+++  E  KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      + ++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIE 342


>gi|56421913|ref|YP_149231.1| peptide chain release factor 1 [Geobacillus kaustophilus HTA426]
 gi|261420783|ref|YP_003254465.1| peptide chain release factor 1 [Geobacillus sp. Y412MC61]
 gi|297531578|ref|YP_003672853.1| peptide chain release factor 1 [Geobacillus sp. C56-T3]
 gi|319768453|ref|YP_004133954.1| peptide chain release factor 1 [Geobacillus sp. Y412MC52]
 gi|61214572|sp|Q5KUH3|RF1_GEOKA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56381755|dbj|BAD77663.1| peptide chain release factor 1 (RF-1) in translation [Geobacillus
           kaustophilus HTA426]
 gi|261377240|gb|ACX79983.1| peptide chain release factor 1 [Geobacillus sp. Y412MC61]
 gi|297254830|gb|ADI28276.1| peptide chain release factor 1 [Geobacillus sp. C56-T3]
 gi|317113319|gb|ADU95811.1| peptide chain release factor 1 [Geobacillus sp. Y412MC52]
          Length = 358

 Score =  221 bits (564), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 117/351 (33%), Positives = 181/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +   QR   LN    DP +  +  + +   +E+  L+  +   +E +        
Sbjct: 1   MFDRLEAVEQRYEKLNELLMDPDVINDPKKLRDYSKEQADLEETVQTYREYKSVREQLAE 60

Query: 72  LLELALEEDDCSILQE----TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +  E+ +  + +       +  +R +  VE  +   L     D  +  +E+ A AGG
Sbjct: 61  AKAMLEEKLEPELREMVKEEIGELEEREEALVEKLKVLLLPKDPNDEKNVIMEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE + +KTE +E       G K    +I G  AY  LK E G 
Sbjct: 121 EEAALFAGDLYRMYTRYAESQGWKTEVIEASPTGLGGYKEIIFMINGKGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P   + IE+EI+E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLP-EMEEIEVEINEKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+VV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K  +G
Sbjct: 240 SAVRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLRARIYDKY--QQEARAEYDQTRKQAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       VLDG LD+ ++A +   +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQVLDGHLDEIIEALILDDQ 347


>gi|297192053|ref|ZP_06909451.1| peptide chain release factor 1 [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197719497|gb|EDY63405.1| peptide chain release factor 1 [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 359

 Score =  221 bits (564), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 118/350 (33%), Positives = 174/350 (49%), Gaps = 16/350 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +  +   + L  K  DP +  +   A+ L +    L   +   +  +    D   
Sbjct: 1   MFEAVEELIGEHADLEKKLADPSVHADQANARKLNKRYAELTPIVGTYRAWKRTGEDIGT 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EL   +DD     E  D  +  +   E  +   +    +D  D  LEV AGAGG ES 
Sbjct: 61  AREL--AQDDPDFAAEVKDLEKEREALTEKLRLLLVPRDPSDDKDVILEVKAGAGGDESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG----------PNAYGWL 181
            +A  LLRMY R+AE+  +KTE ++  + E  G K   + +K              +  L
Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVAVKTKGGQGATEPGQGVWARL 178

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   +S  R HTS + + V P   + I++EI  +D RID YR+SG GGQ
Sbjct: 179 KYEGGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEIDVEIHANDLRIDVYRSSGPGGQ 237

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTG+V  CQ E+SQ +NK QA  +LR++L     ++ E  A     
Sbjct: 238 SVNTTDSAVRITHLPTGIVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAESKAADARR 297

Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           S+   +    +IR+Y   P   + D R   +  +   VLDGDLD  ++A 
Sbjct: 298 SQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLDAVIQAC 346


>gi|119361535|sp|Q24ML9|RF1_DESHY RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 355

 Score =  221 bits (564), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 109/345 (31%), Positives = 175/345 (50%), Gaps = 11/345 (3%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              +R   L     DP +  N  E +   + +  + + +   +E  + +        L  
Sbjct: 7   EIERRYDELTQLLSDPEVIGNQSEWQKYAKAQAGMTDIVEAFREYSEVVKHLEETQGLLE 66

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E+ D    +     L+ +  + +  +       L     D  +  +E+ AGAGG E+  +
Sbjct: 67  EKLDPEFKEMAELELEELTEKRDELEEKMRILLLPKDPNDDKNVIMEIRAGAGGEEAALF 126

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMYT++AE++ ++TE L     +  G K    LI+G  AY  LK E GVHR+ R+
Sbjct: 127 AGDLYRMYTKYAEQQGWRTELLSASYTDIGGFKEIIFLIEGQGAYSKLKFESGVHRVQRV 186

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS +++ V P   + +++ I+ +D RID + +SG GGQ VNTT SAVRIT
Sbjct: 187 PTTESGGRIHTSTTTVAVLP-EAEEVDVAINPNDLRIDIFCSSGPGGQSVNTTQSAVRIT 245

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG VV CQ E+SQ KNK +A  +LRA+L  LE  + E +  +    ++++G G    
Sbjct: 246 HVPTGTVVSCQDEKSQLKNKEKALRVLRARL--LERAQEEAMGELASERRSQVGTGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       +L G+LD+ + A +   +
Sbjct: 304 RIRTYNF-PQGRVTDHRIGLTLHRLDSILLGELDEVINALITTDQ 347


>gi|313636275|gb|EFS02086.1| peptide chain release factor 1 [Listeria seeligeri FSL S4-171]
          Length = 358

 Score =  221 bits (564), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 106/347 (30%), Positives = 178/347 (51%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
                 R   LN    DP +  +    + L +E+  +   +   +E ++   ++ +   L
Sbjct: 5   LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVEAYREYKNVNAQIDETKEL 64

Query: 73  LELALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L   L+++   + +E    LQ+ K    E  +   +     D  +  LE+   AGG E+ 
Sbjct: 65  LSEKLDDEMREMAKEEFAELQKEKAELEERLKLLLVPKDPNDDKNVILEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AE R +K E ++ +     G K    ++ G +A+  +K E G HR+ 
Sbjct: 125 LFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P   + +EIE+ + D R DT+ ++GAGGQ VNTT SAVR
Sbjct: 185 RVPETESGGRIHTSTATVAILP-EAEEVEIELHDKDIRTDTFASTGAGGQSVNTTMSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+    +RE       + K+ +G G  
Sbjct: 244 LTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKF--EREAREEYDANRKSAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +++G LD+ + A +   +
Sbjct: 302 SERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEVIDALILEDQ 347


>gi|289435805|ref|YP_003465677.1| peptide chain release factor 1 [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
 gi|289172049|emb|CBH28595.1| peptide chain release factor 1 [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
          Length = 358

 Score =  221 bits (564), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 106/347 (30%), Positives = 178/347 (51%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
                 R   LN    DP +  +    + L +E+  +   +   +E ++   ++ +   L
Sbjct: 5   LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVEAYREYKNVNAQIDETKEL 64

Query: 73  LELALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L   L+++   + +E    LQ+ K    E  +   +     D  +  LE+   AGG E+ 
Sbjct: 65  LSEKLDDEMREMAKEEFTELQKEKAELEERLKLLLVPKDPNDDKNVILEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AE R +K E ++ +     G K    ++ G +A+  +K E G HR+ 
Sbjct: 125 LFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P   + +EIE+ + D R DT+ ++GAGGQ VNTT SAVR
Sbjct: 185 RVPETESGGRIHTSTATVAILP-EAEEVEIELHDKDIRTDTFASTGAGGQSVNTTMSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+    +RE       + K+ +G G  
Sbjct: 244 LTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKF--EREAREEYDANRKSAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +++G LD+ + A +   +
Sbjct: 302 SERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQ 347


>gi|283832855|ref|ZP_06352596.1| peptide chain release factor 1 [Citrobacter youngae ATCC 29220]
 gi|291071455|gb|EFE09564.1| peptide chain release factor 1 [Citrobacter youngae ATCC 29220]
          Length = 360

 Score =  221 bits (564), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 112/337 (33%), Positives = 174/337 (51%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+      ++ +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQDELREAKEKCEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESRRWRVEIMSASEGEHGGFKEVIAKISGEGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ +R++        +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVARRQQ--AEASERRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      + ++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLDMLIE 342


>gi|332299913|ref|YP_004441834.1| Peptide chain release factor 1 [Porphyromonas asaccharolytica DSM
           20707]
 gi|332176976|gb|AEE12666.1| Peptide chain release factor 1 [Porphyromonas asaccharolytica DSM
           20707]
          Length = 368

 Score =  221 bits (564), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 98/355 (27%), Positives = 162/355 (45%), Gaps = 20/355 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLIL 72
            +  V R   L T   DP++  +      L +E  HL   +      K++  +  +    
Sbjct: 8   IEALVARHEELETLITDPNVIADGRRFATLSKEYTHLGEILKAGGQYKQLLTQQEEAEST 67

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGTES 130
           L+    +++   +        + ++    ++ + L   +   D  +A LE+ AG GG E+
Sbjct: 68  LQDTDSDEELKAMARELLAEAKEEIPKMEEEIKLLLLPNDPEDDKNAILELRAGTGGDEA 127

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY+R+ E + +        +G   G K   L + G   YG LK E GVHR+
Sbjct: 128 ALFAGDLFRMYSRYCETKGWNVTVSSYTEGGTGGYKEIVLNVTGTGVYGTLKYESGVHRV 187

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P  D      I+E + + DT+R+SGAGGQ+VN  +S V
Sbjct: 188 QRVPQTETQGRIHTSAATVAVLPEADKFEVN-INEGEIKWDTFRSSGAGGQNVNKVESGV 246

Query: 251 RITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           R+ +            + ++C + R Q KNK +A + LR  +Y+ E QK   I  I    
Sbjct: 247 RLHYPWRNPNTGVVEDITIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDEIASRR 304

Query: 303 KTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KT +  G +   IR+Y   P   V D R  +   +   VL GDL   + A +  +
Sbjct: 305 KTMVSTGDRSAKIRTYNF-PQGRVTDHRIGLTVHNLPGVLGGDLQPIIDALIVAE 358


>gi|85860527|ref|YP_462729.1| peptide chain release factor 1 [Syntrophus aciditrophicus SB]
 gi|119361624|sp|Q2LWU9|RF1_SYNAS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|85723618|gb|ABC78561.1| bacterial peptide chain release factor 1 (rf-1) [Syntrophus
           aciditrophicus SB]
          Length = 357

 Score =  221 bits (564), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 109/351 (31%), Positives = 173/351 (49%), Gaps = 12/351 (3%)

Query: 13  LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F        R   L     DP +       +   +E   L + +   ++ +        
Sbjct: 1   MFSKLKEVESRYLELEKLLSDPTVVTRQSLYQKYAKEHADLRDLVEVFRKYEKVGAAIEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL---LSGEADSNDAYLEVHAGAGGT 128
             +L   +D+        +  +  +     ++   +        D  + +LE+ AG GG 
Sbjct: 61  AQQLLRGDDEELKEIAREELPELRQHLAGLEERLKVLLLPRDLNDDRNVFLEIRAGTGGD 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDG-EEAGIKSATLLIKGPNAYGWLKGEQGV 187
           E+  +   L RMY R+AE R++K E +         G K     I G  AY  LK E GV
Sbjct: 121 EAGLFVGDLFRMYARYAEMRRWKVEVISSTPSSGVGGFKEIIASIAGQGAYSQLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS  ++ + P   D +E+ I  +D RID + +SG GGQ VNTTD
Sbjct: 181 HRVQRVPVTEAQGRIHTSAVTVAIMP-EADEVEVTIDPNDLRIDVFHSSGHGGQSVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VV CQ E+SQ KNKA+A  +LRA+L ++ ++K+ +   I E+ K+++G
Sbjct: 240 SAVRITHLPTGLVVSCQDEKSQLKNKAKALKVLRARLLDIMVKKQSDE--ISEARKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +   S  ++L GD+ +F+ A  A  +
Sbjct: 298 SGDRSERIRTYNF-PQGRVTDHRVGLTLYSLENILGGDIQEFIDALTAYFQ 347


>gi|313631914|gb|EFR99059.1| peptide chain release factor 1 [Listeria seeligeri FSL N1-067]
          Length = 358

 Score =  221 bits (564), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 106/347 (30%), Positives = 178/347 (51%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
                 R   LN    DP +  +    + L +E+  +   +   +E ++   ++ +   L
Sbjct: 5   LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVEAYREYKNVNAQIDETKEL 64

Query: 73  LELALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L   L+++   + +E    LQ+ K    E  +   +     D  +  LE+   AGG E+ 
Sbjct: 65  LSEKLDDEMREMAKEEFAELQKEKAELEERLKLLLVPKDPNDDKNVILEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AE R +K E ++ +     G K    ++ G +A+  +K E G HR+ 
Sbjct: 125 LFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P   + +EIE+ + D R DT+ ++GAGGQ VNTT SAVR
Sbjct: 185 RVPETESGGRIHTSTATVAILP-EAEEVEIELHDKDIRTDTFASTGAGGQSVNTTMSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+    +RE       + K+ +G G  
Sbjct: 244 LTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKF--EREAREEYDANRKSAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +++G LD+ + A +   +
Sbjct: 302 SERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQ 347


>gi|229525316|ref|ZP_04414721.1| peptide chain release factor 2 [Vibrio cholerae bv. albensis VL426]
 gi|229338897|gb|EEO03914.1| peptide chain release factor 2 [Vibrio cholerae bv. albensis VL426]
          Length = 299

 Score =  221 bits (564), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 166/297 (55%), Positives = 214/297 (72%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  I ++   + D   LLELA+E +D     E    L  +   +E  +F  + SG+ DS+
Sbjct: 1   MDTIDQLDRGVDDVEGLLELAIEAEDQETFDEIGPELDELGARLEQLEFRRMFSGDHDSS 60

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           D YL++ AG+GGTE+QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G 
Sbjct: 61  DCYLDLQAGSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGD 120

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP VD++I+IEI+ +D RID YRA
Sbjct: 121 YAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRA 180

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+   
Sbjct: 181 SGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAE 240

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E +K++IGWG QIRSYVL     +KDLRT IE  +   VLDGDLD F++A+L 
Sbjct: 241 KQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDKFIEASLK 296


>gi|149177843|ref|ZP_01856442.1| peptide chain release factor 2 (RF-2) [Planctomyces maris DSM 8797]
 gi|148843333|gb|EDL57697.1| peptide chain release factor 2 (RF-2) [Planctomyces maris DSM 8797]
          Length = 331

 Score =  221 bits (564), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 152/326 (46%), Positives = 214/326 (65%), Gaps = 2/326 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
                 W N  +A+ L+ E Q +   +  + ++ +   D  +L+E   EE     + E S
Sbjct: 1   MGAAGFWDNQEKAQGLVNEMQQIQLVVKPLTQLVEGAEDLEVLIEFIEEEGSEDSIPELS 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
              +R++  +E+ + ++++S   D + AYL + AG GGT+S DWA MLLRMY RW E+R 
Sbjct: 61  ATAERLESILEHLELQAMMSAPEDGSAAYLSIQAGEGGTDSSDWAEMLLRMYLRWCERRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F  E L+  D EEAGI+SAT+ I+G  AYG+LKGE G HRL+RISP+DS  RRHTSF+++
Sbjct: 121 FNVELLDRSDAEEAGIRSATIRIEGDYAYGYLKGETGNHRLIRISPFDSAGRRHTSFAAV 180

Query: 210 WVYPVVDDSIEIEISE-SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
            V P + +  EIEIS   D R DTYRASGAGGQH+N TDSA+R+TH+ + VVVQCQ  RS
Sbjct: 181 DVSPDMGEVAEIEISWDQDVREDTYRASGAGGQHINKTDSAIRLTHLESNVVVQCQNNRS 240

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ-IRSYVLQPYQMVKDLR 327
           QHKN+A+A  ML++KL+++E +KR+         K++IG+G Q +R+YVL P Q VKD R
Sbjct: 241 QHKNRAEARKMLKSKLFQIEQEKRDAELAAKRGGKSKIGFGGQTVRNYVLHPDQYVKDAR 300

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAI 353
           T  +  +P  +LDGDLD F++A L  
Sbjct: 301 TGFKAGNPGPILDGDLDGFLEAFLRW 326


>gi|75762680|ref|ZP_00742519.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|74489826|gb|EAO53203.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 358

 Score =  221 bits (564), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 180/347 (51%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
                 R   LN    DP +  +  + +   +E+  +   +   +E +D   +L D   +
Sbjct: 8   LQAVENRYEKLNELLSDPEVISDTNKLREYSKEQSDIQETVEVYREYKDVREQLKDAKAM 67

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LE  L+ +   +++E    L+  +  +  + +   +     D  +  +EV   AGG E+ 
Sbjct: 68  LEEKLDAEMRDMVKEEVSELESQEKTLSERLKILLVPKDPNDDKNVIVEVRGAAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E G HR+ 
Sbjct: 128 LFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKRAFAKLKFENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VNTT SAVR
Sbjct: 188 RVPETESGGRXHTSTATVAVLP-EAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTMSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K  +G G  
Sbjct: 247 LTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 305 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350


>gi|262369773|ref|ZP_06063101.1| peptide chain release factor 1 [Acinetobacter johnsonii SH046]
 gi|262315841|gb|EEY96880.1| peptide chain release factor 1 [Acinetobacter johnsonii SH046]
          Length = 362

 Score =  221 bits (564), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 117/339 (34%), Positives = 168/339 (49%), Gaps = 7/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    + L RE   L        + +    D      +
Sbjct: 9   LDQLSDRHEELTALLADVEVISDNKRFRQLSREHSDLSEITEVWTKYKQAEADIETAEAM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   +  E     + I            +     D+N AYLE+ AG GG E+  ++
Sbjct: 69  LSDPDFKEMAVEEIKENKAIIASLEADLNILMIPKDPNDANSAYLEIRAGTGGDEAAIFS 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYT++AE + ++ E L  ++GE  G K    L+ G   YG LK E G HR+ R+ 
Sbjct: 129 GDLYRMYTKYAESQGWRIEVLSENEGEHGGYKEIICLVNGEGVYGRLKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P +D    +EI+ SD RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRVHTSACTVAILPEIDVDTTVEINASDLRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG VV+CQ+ERSQHKNKA+A  +L ++L   +       A   E  +  +G G    +
Sbjct: 249 IPTGTVVECQEERSQHKNKAKAMALLASRLESAKR--AAADAATSEMRRDLVGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   + D R N+       V++GDL + + + 
Sbjct: 307 IRTYNY-PQGRMTDHRINLTLYKLDAVMEGDLTELLDSL 344


>gi|184154903|ref|YP_001843243.1| peptide chain release factor 1 [Lactobacillus fermentum IFO 3956]
 gi|238692951|sp|B2GAT1|RF1_LACF3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|183226247|dbj|BAG26763.1| peptide chain release factor 1 [Lactobacillus fermentum IFO 3956]
          Length = 360

 Score =  221 bits (564), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 103/354 (29%), Positives = 179/354 (50%), Gaps = 12/354 (3%)

Query: 10  LGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DR 65
           +  +FD       R   LN    DP +  +      L +E   L   +    E +     
Sbjct: 1   MEEIFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKEVTQT 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAG 124
           + D+  +L    + D   + +E  +  +  + +++ + +   +     D  +  +E+   
Sbjct: 61  IKDDTEMLREESDPDLVEMTKEELNEAKERQAQLQDELEVLLIPKDPNDDKNIIMEIRGA 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L  MY R+AEK+ +  E ++ ++ E  G K   L+I G   Y  LK E
Sbjct: 121 AGGDEASLFAADLYNMYVRYAEKQGWNVEVVDRNETEVGGFKEIALIITGDQVYSKLKFE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ RI   +S  R HTS +++ V P   + +++++   D R+D YR+SGAGGQH+N
Sbjct: 181 NGAHRVQRIPATESAGRVHTSTATVGVMP-EAEDVDVDLDPKDIRVDVYRSSGAGGQHIN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L+A++Y+    +++E +      K 
Sbjct: 240 KTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMQILKARVYDYY--QQQEQSEYDAQRKN 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            IG G    +IR+Y   P   V D R  +       ++ GDL++ +++ +   +
Sbjct: 298 AIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGDLEEIIESLIIADQ 350


>gi|294507807|ref|YP_003571865.1| peptide chain release factor RF-2 [Salinibacter ruber M8]
 gi|294344135|emb|CBH24913.1| peptide chain release factor RF-2 [Salinibacter ruber M8]
          Length = 349

 Score =  221 bits (564), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 148/335 (44%), Positives = 211/335 (62%), Gaps = 8/335 (2%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             LN +  DP  W +   A+ + +     +  I   ++++++  D   L  L+ E +   
Sbjct: 4   EELNQERMDPDFWDDPDRAREIEKRIAREEEWIEAWEDVKEQAEDIETLQLLSEE-EGED 62

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
           +  E     +R++ +++  + ESLL    D  DA +E++ GAGGTESQDWA MLLRMY R
Sbjct: 63  MSDEIDAEARRLEQKLDRLELESLLDDPDDERDAIVEINPGAGGTESQDWAEMLLRMYMR 122

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           WAE + +  E +    GEEAGIKSATL ++G +AYG LK E GVHRLVRISP+D++SRRH
Sbjct: 123 WAEDQDYDVELVHQQPGEEAGIKSATLNVQGRHAYGRLKSETGVHRLVRISPFDADSRRH 182

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH-------IP 256
           TSF+S++VYP VDDSI +++SE +  + T+R+ G GGQHVN  ++ VR+           
Sbjct: 183 TSFASVFVYPEVDDSIGVDLSEGEIELQTFRSGGKGGQHVNKVETGVRLIWTGTLSNGEE 242

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316
           T V   C QERSQH+N+ +A  ML++++Y+ E + +EE     ESSK  I WG QIRSYV
Sbjct: 243 TTVRAACTQERSQHQNRRRAREMLKSRIYQAERELKEEEKERLESSKKSIEWGSQIRSYV 302

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           L PY+MV D RT+ ++     VL+G LD F+KA L
Sbjct: 303 LHPYKMVNDHRTDTKRNDAEAVLEGGLDPFIKAYL 337


>gi|260663282|ref|ZP_05864173.1| peptide chain release factor 1 [Lactobacillus fermentum 28-3-CHN]
 gi|260552134|gb|EEX25186.1| peptide chain release factor 1 [Lactobacillus fermentum 28-3-CHN]
          Length = 362

 Score =  221 bits (564), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 103/355 (29%), Positives = 179/355 (50%), Gaps = 12/355 (3%)

Query: 9   CLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---D 64
            +  +FD       R   LN    DP +  +      L +E   L   +    E +    
Sbjct: 2   EMEEIFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKEVTQ 61

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHA 123
            + D+  +L    + D   + +E  +  +  + +++ + +   +     D  +  +E+  
Sbjct: 62  TIKDDTEMLREESDPDLVEMTKEELNETKERQAQLQDELEVLLIPKDPNDDKNIIMEIRG 121

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
            AGG E+  +A  L  MY R+AEK+ +  E ++ ++ E  G K   L+I G   Y  LK 
Sbjct: 122 AAGGDEASLFAADLYNMYVRYAEKQGWNVEVVDRNETEVGGFKEIALIITGDQVYSKLKF 181

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ RI   +S  R HTS +++ V P   + +++++   D R+D YR+SGAGGQH+
Sbjct: 182 ENGAHRVQRIPATESAGRVHTSTATVGVMP-EAEDVDVDLDPKDIRVDVYRSSGAGGQHI 240

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L+A++Y+    +++E +      K
Sbjct: 241 NKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMQILKARVYDYY--QQQEQSEYDAQRK 298

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             IG G    +IR+Y   P   V D R  +       ++ GDL++ +++ +   +
Sbjct: 299 NAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGDLEEIIESLIIADQ 352


>gi|19704667|ref|NP_604229.1| peptide chain release factor 1 [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|22096034|sp|Q8R5W0|RF1_FUSNN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|19714975|gb|AAL95528.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 365

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 121/359 (33%), Positives = 185/359 (51%), Gaps = 13/359 (3%)

Query: 7   LNCLGG--LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           +  L G  +FD  +  V R   LN     P +  +  +     +    +   +   KE +
Sbjct: 1   MINLRGVKMFDKLEEVVARYDELNKMLVSPEVLADSKKMIECNKAINEITEIVEKYKEYK 60

Query: 64  DRLCDNLILLELALEEDDCSILQE----TSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
             + D   + E    E D  + +       +  +++    E  +   L   + D  +  +
Sbjct: 61  KYVDDIEFIKESFKTEKDSDMKEMLNEELKEAEEKLPKLEEELKILLLPKDKNDDKNVIV 120

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           E+  GAGG E+  +A  L RMY+R+AE++K+K E +E  DGE  G+K     I G  AY 
Sbjct: 121 EIRGGAGGDEAALFAADLFRMYSRYAERKKWKIEIIEKQDGELNGLKEIAFTIIGLGAYS 180

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            LK E GVHR+ R+   +++ R HTS +++ V P V+D  E+ +   D +IDTYR+ GAG
Sbjct: 181 RLKFESGVHRVQRVPKTEASGRIHTSTATVAVLPEVEDIQEVTVDPKDLKIDTYRSGGAG 240

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQHVN TDSAVRITH+PTG+VVQCQ ERSQ KN+ +A   L  KLYE+E +K+       
Sbjct: 241 GQHVNMTDSAVRITHLPTGIVVQCQDERSQLKNREKAMKHLLTKLYEMEQEKQRSEVE-- 298

Query: 300 ESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              + ++G G    +IR+Y   P   + D R  +        LDGD+D+ + A +   +
Sbjct: 299 SERRLQVGTGDRAEKIRTYNF-PDGRITDHRIKLTVHQLEAFLDGDIDEMIDALITFHQ 356


>gi|227514467|ref|ZP_03944516.1| peptide chain release factor RF1 [Lactobacillus fermentum ATCC
           14931]
 gi|227087153|gb|EEI22465.1| peptide chain release factor RF1 [Lactobacillus fermentum ATCC
           14931]
 gi|299782948|gb|ADJ40946.1| Peptide chain release factor 1 (RF-1) [Lactobacillus fermentum CECT
           5716]
          Length = 362

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 103/355 (29%), Positives = 179/355 (50%), Gaps = 12/355 (3%)

Query: 9   CLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---D 64
            +  +FD       R   LN    DP +  +      L +E   L   +    E +    
Sbjct: 2   EMEEIFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKEVTQ 61

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHA 123
            + D+  +L    + D   + +E  +  +  + +++ + +   +     D  +  +E+  
Sbjct: 62  TIKDDTEMLREESDPDLVEMTKEELNEAKERQAQLQDELEVLLIPKDPNDDKNIIMEIRG 121

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
            AGG E+  +A  L  MY R+AEK+ +  E ++ ++ E  G K   L+I G   Y  LK 
Sbjct: 122 AAGGDEASLFAADLYNMYVRYAEKQGWNVEVVDRNETEVGGFKEIALIITGDQVYSKLKF 181

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E G HR+ RI   +S  R HTS +++ V P   + +++++   D R+D YR+SGAGGQH+
Sbjct: 182 ENGAHRVQRIPATESAGRVHTSTATVGVMP-EAEDVDVDLDPKDIRVDVYRSSGAGGQHI 240

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T SAVR+TH+PTG+VV  Q ERSQ +N+A+A  +L+A++Y+    +++E +      K
Sbjct: 241 NKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMQILKARVYDYY--QQQEQSEYDAQRK 298

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             IG G    +IR+Y   P   V D R  +       ++ GDL++ +++ +   +
Sbjct: 299 NAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDKIMAGDLEEIIESLIIADQ 352


>gi|51246578|ref|YP_066462.1| peptide chain release factor 1 [Desulfotalea psychrophila LSv54]
 gi|61214607|sp|Q6AJM5|RF1_DESPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|50877615|emb|CAG37455.1| probable peptide chain release factor 1 (RF-1) [Desulfotalea
           psychrophila LSv54]
          Length = 357

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 114/352 (32%), Positives = 178/352 (50%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           LFD +D+   R+  L  K  DP +  +  E + ++RE  HL    +  KE +    D   
Sbjct: 2   LFDKFDDLDNRIEHLEGKLSDPEIVNDQKEFQKVVREHAHLSKLNTVYKEYKTACQDVED 61

Query: 72  LLELALEEDDCSI-----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
              +  ++ +          E  +   RI    +  +   L     D  + +LE+ AGAG
Sbjct: 62  NKAILHDDGEDPDLKELAKAELEELNVRIVELDKAIKIILLPKDPNDEKNTFLEIRAGAG 121

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +   L RMYTR+AE   +K E +  +     G K    LI G   +  LK E G
Sbjct: 122 GDEAALFVADLFRMYTRFAETMGWKVEVMSSNPLGIGGFKEIIALISGEQVFSKLKYESG 181

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS  ++ + P   + +E+ I  ++ + D +R+SG GGQ VNTT
Sbjct: 182 VHRVQRVPETETQGRIHTSAVTVAILP-EAEEVELHIDMNELKFDVFRSSGPGGQSVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTG+VV CQ E+SQHKNK +A  +LRA+L +    +    A I E+ ++++
Sbjct: 241 DSAVRITHLPTGLVVICQDEKSQHKNKVKALTVLRARLLDKLESEHN--AKISEARRSQV 298

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R N+       ++ G LD+ +   +   +
Sbjct: 299 GTGDRSERIRTYNF-PQGRVTDHRINLTLYKLETIMGGSLDEVIYPLITHDQ 349


>gi|160902302|ref|YP_001567883.1| peptide chain release factor 1 [Petrotoga mobilis SJ95]
 gi|160359946|gb|ABX31560.1| peptide chain release factor 1 [Petrotoga mobilis SJ95]
          Length = 356

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 130/345 (37%), Positives = 202/345 (58%), Gaps = 10/345 (2%)

Query: 13  LFDWD-NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D+     +++  L  +  DP++  ++   K L +E   L    +  +  +  L D   
Sbjct: 3   ILDFKGEVKKKIKELEKQLSDPYITNDIENLKKLGQEHSKLSELNTLFESYEQDLEDIKA 62

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL--SGEADSNDAYLEVHAGAGGTE 129
           L E+   +D      ++       K E   K+    L    E D  +  +E+ AG GG E
Sbjct: 63  LREMYENKDVSEEEYQSMLQELEKKEEETRKKIIEGLVSQDEYDERNIIMEIRAGTGGDE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A+ L+RMY R+AE++ +K E L++++ E  GIK+A L IKG  AY  LK E GVHR
Sbjct: 123 ASLFASELMRMYLRYAERKNWKYELLDLNENELGGIKTAILKIKGQGAYRRLKYESGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S+ R HTS +++ V P     I+++I+E+D RIDTYRASGAGGQ+VN TDSA
Sbjct: 183 VQRVPQTESSGRIHTSTATVAVLP-EATDIDVQINENDLRIDTYRASGAGGQYVNKTDSA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-- 307
           VRITH+PTG+VV CQ ERSQH+NK +A N+LRAKL+E++L++++  + + +  K++IG  
Sbjct: 242 VRITHLPTGIVVTCQNERSQHQNKEKALNILRAKLFEIKLEEQQ--SQLTQERKSQIGTA 299

Query: 308 -WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               +IR+Y   P   V D R        +++LDGDLD+ +   L
Sbjct: 300 QRSEKIRTYNF-PQNRVTDHRIQYTTHRINEILDGDLDEIIDKLL 343


>gi|88704041|ref|ZP_01101756.1| Peptide chain release factor 1 [Congregibacter litoralis KT71]
 gi|88701868|gb|EAQ98972.1| Peptide chain release factor 1 [Congregibacter litoralis KT71]
          Length = 361

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 114/344 (33%), Positives = 182/344 (52%), Gaps = 9/344 (2%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           L   +   +R   ++    DP +  +  + + L RE   L+  +    E Q+   D    
Sbjct: 6   LLKLETLSERHEEVSALLGDPGVISDQDQFRRLSREFSELETVVKCFGEYQELQGDLEAA 65

Query: 73  LELALEEDDCSILQ---ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             +  ++D         E S+   R +      Q   L     DS++ +LE+ AG GG E
Sbjct: 66  ESMLADDDADMREMAKTEISEGEARREALEAELQLLLLPRDPKDSHNVFLEIRAGTGGDE 125

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  ++  L RMY+R+AE++ ++ E L    GE  G K     I+G + Y +LK E G HR
Sbjct: 126 AAIFSGDLQRMYSRFAERQGWRIEVLSERPGEHGGYKEIISRIEGSDVYAYLKFESGAHR 185

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ +    ++   +EI+++D R+DTYRASGAGGQHVN TDSA
Sbjct: 186 VQRVPETESQGRIHTSACTVAILAEPEELEAVEINKADLRVDTYRASGAGGQHVNKTDSA 245

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+TH+PTG+VV+CQ ERSQHKN+A+A ++L+AKL  +  +   + +   E  +  +G G
Sbjct: 246 VRLTHLPTGIVVECQDERSQHKNRARAMSLLQAKLDSVAEE--SQASEQAEQRRNLVGTG 303

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
               +IR+Y   P   V D R N+      +V+ GD++  +   
Sbjct: 304 DRSDRIRTYNF-PQGRVTDHRINLTLYKLDEVMAGDMEAVLGPL 346


>gi|228994048|ref|ZP_04153949.1| Peptide chain release factor 1 [Bacillus pseudomycoides DSM 12442]
 gi|229000115|ref|ZP_04159685.1| Peptide chain release factor 1 [Bacillus mycoides Rock3-17]
 gi|229007635|ref|ZP_04165229.1| Peptide chain release factor 1 [Bacillus mycoides Rock1-4]
 gi|228753646|gb|EEM03090.1| Peptide chain release factor 1 [Bacillus mycoides Rock1-4]
 gi|228759652|gb|EEM08628.1| Peptide chain release factor 1 [Bacillus mycoides Rock3-17]
 gi|228765696|gb|EEM14349.1| Peptide chain release factor 1 [Bacillus pseudomycoides DSM 12442]
          Length = 358

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 118/347 (34%), Positives = 181/347 (52%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
                 R   LN    DP +  +  + +   +E+  +   +   +E +D   +L D   +
Sbjct: 8   LQAVENRYEKLNELLSDPEVISDSNKLREYSKEQSDMQETVEVYREYKDVRAQLRDAKAM 67

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LE  L+ D   +++E    L+  + E+  + +   +     D  +  +EV   AGG E+ 
Sbjct: 68  LEEKLDADMREMVKEEVSELEGQEKELSERLKILLVPKDPNDDKNVIVEVRGAAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE + +KTE +E    E  G K    +I G  A+  LK E G HR+ 
Sbjct: 128 LFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGKGAFAKLKFENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VNTT SAVR
Sbjct: 188 RVPETESGGRIHTSTATVAVLP-EAEEVEIDIHEKDVRVDTFASSGPGGQSVNTTMSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+   Q  E  A   ++ K  +G G  
Sbjct: 247 LTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQ--EAQAEYDQNRKQAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +L G LDDF+ A +   +
Sbjct: 305 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLDDFINALVMEDQ 350


>gi|311279353|ref|YP_003941584.1| peptide chain release factor 1 [Enterobacter cloacae SCF1]
 gi|308748548|gb|ADO48300.1| peptide chain release factor 1 [Enterobacter cloacae SCF1]
          Length = 360

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 110/337 (32%), Positives = 174/337 (51%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+     +   +   +  Q   L     D  +A++EV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQDELREAKDKSEQLEQQLQVLLLPKDPDDERNAFVEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +GE  G K     + G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEVIAKVSGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   EI+ ++ RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAEMPEINPTELRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      + ++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIE 342


>gi|127511745|ref|YP_001092942.1| peptide chain release factor 2 [Shewanella loihica PV-4]
 gi|126637040|gb|ABO22683.1| bacterial peptide chain release factor 2 (bRF-2) [Shewanella
           loihica PV-4]
          Length = 293

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 157/291 (53%), Positives = 207/291 (71%), Gaps = 1/291 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+EEDD     + +  L  ++  +E  +F  + SG  D++D YL++
Sbjct: 1   MDSGLEDVEGLLELAVEEDDEDTFNDANSELAGLEKRLEELEFRRMFSGPNDASDCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GGTE+QDWANM+LRMY RW E + +K E +E+ DG+ AGIK AT+   G  A+G L
Sbjct: 61  QSGSGGTEAQDWANMVLRMYLRWGEAKGYKPELIEVTDGDVAGIKGATIKFTGEYAFGSL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS+ +RHTSF S++VYP +DDSIEI+I+ +D RID YRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPADLRIDVYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITH+PT  VVQCQ +RSQHKNK  A   L+AKL+ELE+ K+       E 
Sbjct: 181 HVNRTESAVRITHLPTNTVVQCQNDRSQHKNKDTAMKQLKAKLFELEMHKQNAEKQAAED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 241 AKSDIGWGSQIRSYVLDD-ARIKDLRTGVENRNTQSVLDGDLDKFIEASLK 290


>gi|254284237|ref|ZP_04959205.1| peptide chain release factor 2 [gamma proteobacterium NOR51-B]
 gi|219680440|gb|EED36789.1| peptide chain release factor 2 [gamma proteobacterium NOR51-B]
          Length = 280

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 158/279 (56%), Positives = 204/279 (73%), Gaps = 1/279 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A  EDD   +Q  +D++  +   +E  +F  + SGE D  +A+L++ AG+GGTE+QDWA
Sbjct: 1   MAASEDDEETVQAVTDDMANLMQALEALEFRRMFSGEMDDANAFLDIQAGSGGTEAQDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            MLLRMY RW E R FKT  +E+  G+ AGIKSAT+  +G   +GW++ E GVHRLVR S
Sbjct: 61  EMLLRMYLRWGESRGFKTTLVEVSAGDVAGIKSATIQFEGEYPFGWIRTETGVHRLVRKS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DS +RRHTSF+S++V P VDD+I+IEI+ +D R+DTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 121 PFDSGNRRHTSFASVFVSPEVDDNIDIEINPADLRVDTYRSSGAGGQHVNTTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           +PT VV  CQ ERSQH+N+ +A   LRAKLYELE+QKR   A   E SK +IGWG QIRS
Sbjct: 181 VPTNVVASCQTERSQHQNRDRAMKQLRAKLYELEIQKRNAEAQAMEDSKADIGWGSQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           YVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 241 YVLDD-SRIKDLRTGVETHNTQAVLDGDLDQFIEASLKQ 278


>gi|329770544|ref|ZP_08261922.1| peptide chain release factor 1 [Gemella sanguinis M325]
 gi|328836293|gb|EGF85962.1| peptide chain release factor 1 [Gemella sanguinis M325]
          Length = 362

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 118/356 (33%), Positives = 190/356 (53%), Gaps = 14/356 (3%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ--- 63
           +  LG     +   +R   LN    DP +  +  +     +E++ ++  +S  +E +   
Sbjct: 1   MEILGQ---LEVVEERYEKLNELLSDPDVVSDTKKLMEYSKEQRSIEKTVSVFREYKDIV 57

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVH 122
            ++ D   LLE+  +++   ++QE    L+       E  +   L     D  +  +EV 
Sbjct: 58  QQINDTKELLEIEDDKEMKEMMQEEIKELEPTLAPMEEELKILLLPKDPNDGKNVVVEVR 117

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
             AGG E+Q +A  LLRMYTR+AE + +K + LE  +    GIK A  +I G + Y  +K
Sbjct: 118 GAAGGDEAQLFAGDLLRMYTRFAESQGWKVDVLERSETGIGGIKEAIFIISGEDVYSKMK 177

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HR+ R+   +S+ R HTS +++ V P  ++      +E+D R+DT+ +SGAGGQ 
Sbjct: 178 FESGAHRVQRVPTTESSGRIHTSTATVVVLPEAEEVEIEI-NENDIRVDTFASSGAGGQS 236

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT SAVR+THIPTGVVV  Q ERSQ KNK +A  +LRA++Y+    ++EE A      
Sbjct: 237 VNTTMSAVRLTHIPTGVVVSMQDERSQIKNKEKAMKVLRARVYDKY--QQEEQAKFDAER 294

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K+++G G    +IR+Y   P   V D R  +       +++G LD+ ++A    ++
Sbjct: 295 KSKVGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEVLEALRIAEQ 349


>gi|326798862|ref|YP_004316681.1| peptide chain release factor 1 [Sphingobacterium sp. 21]
 gi|326549626|gb|ADZ78011.1| Peptide chain release factor 1 [Sphingobacterium sp. 21]
          Length = 357

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 98/342 (28%), Positives = 172/342 (50%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI---- 71
            +    R   +  +  +P    ++     L +E + L   +      ++ + +       
Sbjct: 5   LEAIKLRWEEVERELSNPDTVNDMKRFAKLNKEYKDLGKIVDEYYIYKNIISNIETNKDI 64

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L     +E      ++    L + + + E  +   +     D+ +A  E+  G GG E+ 
Sbjct: 65  LANEKDQELREMAKEDLDALLVQKEEKEEKVRLMMIPKDPEDAKNAIFEIRGGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+ +++ ++ E +++ +G   G K   L + G + YG LK E GVHR+ 
Sbjct: 125 LFAGDLYRMYTRYFDQKGWRVEVMDVTEGTAGGYKEVILKVSGEDVYGQLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P   + +++EI+ +D  + T R+ GAGGQ+VN  ++ V+
Sbjct: 185 RVPDTETQGRVHTSAASVAVLP-EAEEVDVEINPADIEMQTSRSGGAGGQNVNKVETKVQ 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +TH P+G+VV CQ ERSQ  N+  A  MLR KLYELE+QK+    +I    KT +  G +
Sbjct: 244 LTHKPSGIVVVCQVERSQLANRELAMEMLRTKLYELEVQKK--HGDIAAKRKTMVSTGDR 301

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              IR+Y   P   V + R  +   +   ++DGD+ + + A 
Sbjct: 302 SAKIRTYNY-PQGRVTEHRIGLTMYNLPAIMDGDIQEIIDAL 342


>gi|115375817|ref|ZP_01463069.1| peptide chain release factor 1 [Stigmatella aurantiaca DW4/3-1]
 gi|310822927|ref|YP_003955285.1| peptide chain release factor 1 [Stigmatella aurantiaca DW4/3-1]
 gi|115367205|gb|EAU66188.1| peptide chain release factor 1 [Stigmatella aurantiaca DW4/3-1]
 gi|309395999|gb|ADO73458.1| Peptide chain release factor 1 [Stigmatella aurantiaca DW4/3-1]
          Length = 366

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 100/345 (28%), Positives = 177/345 (51%), Gaps = 11/345 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  +   +R   L     +P +  +  + + + +ER  L+  +   +  +  L D   
Sbjct: 1   MIDKLEEVERRFERLTADLSNPDVLADSAKLQKVSKERAALEKLVETFRTYRKVLGDLAE 60

Query: 72  LLELALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           +       D               Q+ +   +  +   L     D  D  LE+ AGAGG 
Sbjct: 61  VEAWLDGGDADEKAYAREALPGLKQQREEFEQELKILLLPKDPNDEKDVILEIRAGAGGD 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  +++MY R+A +R +K + +++  G   G+K  T+ + G   +  +K E GVH
Sbjct: 121 EAGLFAEEVMQMYLRYATRRGWKADIVDMSPGSVGGVKDVTITLSGAAVFSNMKYESGVH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS  ++ V P   + ++++I+ +D  +   R++G+GGQ VNTTDS
Sbjct: 181 RVQRVPATETQGRIHTSTITVSVMP-EAEDVDVQINPADIEMQVMRSTGSGGQSVNTTDS 239

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+ H P+G+VV+CQQE+SQ KN+AQA  MLRAKLYE+E ++     +     + ++G 
Sbjct: 240 AVRLIHKPSGIVVKCQQEKSQTKNRAQAMRMLRAKLYEIEQERIRSERD--SMRRGQVGT 297

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G    +IR+Y   P   + D R ++   +   ++ G +DD + A 
Sbjct: 298 GDRSEKIRTYNF-PQDRLTDHRISLTVHNLPGIMAGGIDDVITAC 341


>gi|319951972|ref|YP_004163239.1| bacterial peptide chain release factor 1 (brf-1) [Cellulophaga
           algicola DSM 14237]
 gi|319420632|gb|ADV47741.1| bacterial peptide chain release factor 1 (bRF-1) [Cellulophaga
           algicola DSM 14237]
          Length = 372

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 100/346 (28%), Positives = 171/346 (49%), Gaps = 12/346 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCD 68
           + D  +   QR   ++     P +  +      L +E + L + +       E  + + +
Sbjct: 15  MLDKLNIVKQRFDEVSDLIIQPDVISDQKRYVELNKEYKDLKSLVDKRDLYIEFTNNVEE 74

Query: 69  NLILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              ++    + +   + +   +  +       E  +   +     DS +  +EV AG GG
Sbjct: 75  AQEIISDGSDAEMVEMAKMQLEEAKVGLPKLEEEIKVLLIPKDPEDSKNVVVEVRAGTGG 134

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYT++ E + +KT  +++ +G   G K     + G N YG LK E GV
Sbjct: 135 DEASIFAGDLFRMYTKYCESKGWKTNVIDLSEGTSGGYKEIQFEVTGDNVYGTLKFEAGV 194

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P  +D     I   D RID + +SG GGQ VNTT 
Sbjct: 195 HRVQRVPQTETQGRVHTSAATVMVLPEAEDFDVQ-IEPKDVRIDFFCSSGPGGQSVNTTY 253

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIP+G+V QCQ ++SQHKNK +A+ +LR++LY+ EL K++E         +++ 
Sbjct: 254 SAVRLTHIPSGLVAQCQDQKSQHKNKEKAFKVLRSRLYDQELAKKQEE--DAAKRNSQVS 311

Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            G +   IR+Y       V D R  +      ++++GD+   +   
Sbjct: 312 SGDRSAKIRTYNYS-QGRVTDHRIGLTLYDLQNIMNGDIQRIIDEL 356


>gi|261345593|ref|ZP_05973237.1| peptide chain release factor 2 [Providencia rustigianii DSM 4541]
 gi|282566073|gb|EFB71608.1| peptide chain release factor 2 [Providencia rustigianii DSM 4541]
          Length = 299

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 168/298 (56%), Positives = 217/298 (72%), Gaps = 1/298 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  I +++  + D   LLELA+E DD     ET   L++++ ++E  +F  + SGE DS 
Sbjct: 1   MDTIDQLEQGIEDVEGLLELAIEADDEETFNETDAELEQLQGKLEQLEFRRMFSGEYDSA 60

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           + Y+++ AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E  DG+ AG+KSAT+ I G 
Sbjct: 61  NCYIDLQAGSGGTEAQDWASMLMRMYLRWAESKGFKTEIIEESDGDVAGLKSATIKIIGD 120

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYGWL+ E GVHRLVR SP+DS  RRHTSFSS ++YP VDD I+IEI+ +D RID YRA
Sbjct: 121 YAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRA 180

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYELE+QK+   
Sbjct: 181 SGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMRQLKAKLYELEIQKKNAD 240

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
               E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 241 KQAMEENKSDIGWGSQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 297


>gi|262041834|ref|ZP_06015019.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259040826|gb|EEW41912.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 360

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 113/337 (33%), Positives = 176/337 (52%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +  + + L RE   L +      + +    D      +
Sbjct: 9   LEALYERHEEVQALLGDAATIADQDKFRALSREYAQLSDVARCYTDWRQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE   + +       +  Q   L     D  +A++EV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQEELRDAKEKGDQLEQQLQILLLPKDPDDERNAFVEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+AE R+++ E L  ++GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYTRYAESRRWQVEILSANEGEHGGFKEVIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAEMPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      + ++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLDMLIE 342


>gi|152970781|ref|YP_001335890.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238895295|ref|YP_002920030.1| peptide chain release factor 1 [Klebsiella pneumoniae NTUH-K2044]
 gi|330009867|ref|ZP_08306623.1| peptide chain release factor 1 [Klebsiella sp. MS 92-3]
 gi|166223565|sp|A6TAN9|RF1_KLEP7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|150955630|gb|ABR77660.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238547612|dbj|BAH63963.1| peptide chain release factor 1 [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|328534693|gb|EGF61258.1| peptide chain release factor 1 [Klebsiella sp. MS 92-3]
          Length = 360

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 113/337 (33%), Positives = 176/337 (52%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +  + + L RE   L +      + +    D      +
Sbjct: 9   LEALYERHEEVQALLGDAATIADQDKFRALSREYAQLSDVARCYTDWRQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE   + +       +  Q   L     D  +A++EV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQEELRDAKEKGDQLEQQLQVLLLPKDPDDERNAFVEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+AE R+++ E L  ++GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYTRYAESRRWQVEILSANEGEHGGFKEVIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAEMPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++   E+ KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      + ++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLDMLIE 342


>gi|313886402|ref|ZP_07820124.1| peptide chain release factor 1 [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312924148|gb|EFR34935.1| peptide chain release factor 1 [Porphyromonas asaccharolytica
           PR426713P-I]
          Length = 368

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 99/355 (27%), Positives = 163/355 (45%), Gaps = 20/355 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLIL 72
            +  V R   L T   DP++  +      L +E  HL   +      K++  +  +    
Sbjct: 8   VEALVARHEELETLITDPNVIADGRRFATLSKEYTHLGEILKAGGQYKQLLTQQEEAEST 67

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGTES 130
           L+ A  +++   +        + ++    ++ + L   +   D  +A LE+ AG GG E+
Sbjct: 68  LQDADSDEELKAMARELLAEAKEEIPKMEEEIKLLLLPNDPEDDKNAILELRAGTGGDEA 127

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY+R+ E + +        +G   G K   L + G   YG LK E GVHR+
Sbjct: 128 ALFAGDLFRMYSRYCETKGWNVTVSSYTEGGTGGYKEIVLNVTGTGVYGTLKYESGVHRV 187

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P  D      I+E + + DT+R+SGAGGQ+VN  +S V
Sbjct: 188 QRVPQTETQGRIHTSAATVAVLPEADKFEVN-INEGEIKWDTFRSSGAGGQNVNKVESGV 246

Query: 251 RITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           R+ +            + ++C + R Q KNK +A + LR  +Y+ E QK   I  I    
Sbjct: 247 RLHYPWRNPNTGVVEDITIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDEIASRR 304

Query: 303 KTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KT +  G +   IR+Y   P   V D R  +   +   VL GDL   + A +  +
Sbjct: 305 KTMVSTGDRSAKIRTYNF-PQGRVTDHRIGLTVHNLPGVLGGDLQPIIDALIVAE 358


>gi|295100871|emb|CBK98416.1| bacterial peptide chain release factor 1 (bRF-1) [Faecalibacterium
           prausnitzii L2-6]
          Length = 361

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 103/348 (29%), Positives = 172/348 (49%), Gaps = 13/348 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +   +R   L+ +   P    +  + + LM+E       +     +            L 
Sbjct: 9   EAVCRRFEELSIRLNQPETAADPAQLRRLMQEYHEAQPVVDAYHALTTAQDHLAQAKALL 68

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFES------LLSGEADSNDAYLEVHAGAGGTES 130
             ++      +     +  +   +  + E+      L     D     +E+ AGAGG E+
Sbjct: 69  EGDEPLDADFKAMVQQELSEKSQDVAELENNLKILLLPKDANDEKSVIMEIRAGAGGEEA 128

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A+ L+RMYT + + R ++ E L +++ E  G K A   + G  AY  LK E GVHR+
Sbjct: 129 ALFAHSLVRMYTMYVQSRGWEMELLNLNETELGGTKEAVFAVNGRGAYNRLKYESGVHRV 188

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++  +   D RIDT+R+SGAGGQH+N T SA+
Sbjct: 189 QRVPETETQGRIHTSTATVAVMPQ-AEEVDFALDMKDLRIDTFRSSGAGGQHINKTSSAI 247

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+THIPTG VV+CQ ERSQ +NK +A  +LR++L  L  +++E+   I      ++G G 
Sbjct: 248 RVTHIPTGTVVECQNERSQFQNKDKALEILRSRL--LAQKQKEQQDAINADRAGQVGTGD 305

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P     D R  +   +   ++DGDLDD + A    ++
Sbjct: 306 RSEKIRTYNF-PQDRCTDHRIGLTVHNLDKIMDGDLDDIIDALATREQ 352


>gi|117621299|ref|YP_857649.1| peptide chain release factor 1 [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|166223525|sp|A0KMZ8|RF1_AERHH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|117562706|gb|ABK39654.1| peptide chain release factor 1 [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 362

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 110/342 (32%), Positives = 184/342 (53%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     +P +  +    + L RE   L++ +   ++ +    +     ++
Sbjct: 9   LEGLIERHEEVQAMLGEPDVAADQDRYRALTREYAQLEDIVHAFQQFRQAEENLDATRQM 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D         +        + + +  Q   L     D N+ YLE+ AGAGG E+  
Sbjct: 69  LEEDDADLREMAQEELPLAKATFEEQEQALQVMLLPRDPKDDNNCYLEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE++ ++   +  +DGE  G K     ++G + YG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAERQGWRVSIVSCNDGEHGGYKEVIAKVEGEHVYGRLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P V ++ +IEI+ S+ +IDT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRVHTSACTVAVLPEVPEAEQIEINPSELKIDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ ERSQHKN+A+A ++L A+L   E ++         + +  +G G   
Sbjct: 249 THLPTGLVVECQDERSQHKNRAKAMSVLSARLQAAEDERHRAAEQ--STRRNLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +IR+Y   P   + + R N+      ++++GDLD  +   +
Sbjct: 307 ERIRTYNY-PQGRLSEHRINLTLYRLGEIMEGDLDCVISPMI 347


>gi|15834912|ref|NP_296671.1| peptide chain release factor 1 [Chlamydia muridarum Nigg]
 gi|270285082|ref|ZP_06194476.1| peptide chain release factor 1 [Chlamydia muridarum Nigg]
 gi|270289105|ref|ZP_06195407.1| peptide chain release factor 1 [Chlamydia muridarum Weiss]
 gi|301336478|ref|ZP_07224680.1| peptide chain release factor 1 [Chlamydia muridarum MopnTet14]
 gi|13878666|sp|Q9PL16|RF1_CHLMU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|7190335|gb|AAF39160.1| peptide chain release factor 1 [Chlamydia muridarum Nigg]
          Length = 359

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 113/340 (33%), Positives = 174/340 (51%), Gaps = 11/340 (3%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI----QDRLCDNLILLELA 76
           +RL  +     DP+++ N  E   L +E   L    +  + I    +    D L L    
Sbjct: 10  RRLEEVEKLISDPNIFSNPKEYSSLSKEHARLSEIKNAHESILAAKKILHDDKLALSTEK 69

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
             E    + +      + ++   +  +   +     D     +E+ AG GG E+  +   
Sbjct: 70  DPEMIAMLEEGIQGGEESLERLSKQLENLLIPPDPDDDLSVIMELRAGTGGDEAALFVGD 129

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
            +RMY  +A  + ++ E L   + +  G K   + + G +   +L+ E G HR+ R+   
Sbjct: 130 CVRMYHLYASIKGWQCEVLSASESDLGGYKEYIMGVSGTSVKRFLQYEAGTHRVQRVPET 189

Query: 197 DSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           ++  R HTS  +I V P   +D  E+ I E D RIDT+R+SGAGGQHVN TDSAVRITHI
Sbjct: 190 ETQGRVHTSAVTIAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSAVRITHI 249

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTGVVV CQ ERSQHKNKA+A  +L+A++ + E+QKRE+ A+   S   ++G G    +I
Sbjct: 250 PTGVVVSCQDERSQHKNKAKAMRVLKARIRDAEVQKREQEASAMRS--AQVGSGDRSERI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           R+Y   P   V D R  +   +   V+ G+LD    A ++
Sbjct: 308 RTYNF-PQNRVTDHRIGLTLYNLDRVMQGELDMITTALVS 346


>gi|204927641|ref|ZP_03218842.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|204322983|gb|EDZ08179.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
          Length = 360

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 113/337 (33%), Positives = 176/337 (52%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +        Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTNWQQVQDDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE      ++ +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E + + +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESRRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A+++  E  KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      + ++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIE 342


>gi|194736546|ref|YP_002114806.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|238689756|sp|B4TXU2|RF1_SALSV RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|194712048|gb|ACF91269.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|322616772|gb|EFY13680.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322620418|gb|EFY17284.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322625680|gb|EFY22499.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322626130|gb|EFY22940.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322633737|gb|EFY30477.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322638891|gb|EFY35584.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322640874|gb|EFY37523.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322644095|gb|EFY40640.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322649166|gb|EFY45604.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322655325|gb|EFY51633.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322660917|gb|EFY57148.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322662786|gb|EFY58993.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322667970|gb|EFY64129.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322674268|gb|EFY70362.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322678549|gb|EFY74607.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322683208|gb|EFY79224.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322686902|gb|EFY82880.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323195208|gb|EFZ80388.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323200201|gb|EFZ85287.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323204529|gb|EFZ89533.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323207354|gb|EFZ92302.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323213949|gb|EFZ98718.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323217339|gb|EGA02058.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323219317|gb|EGA03806.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323228020|gb|EGA12165.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323231361|gb|EGA15474.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323235801|gb|EGA19880.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323240370|gb|EGA24413.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323245262|gb|EGA29262.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323252824|gb|EGA36660.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323254893|gb|EGA38687.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323261018|gb|EGA44613.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323266735|gb|EGA50221.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323268942|gb|EGA52398.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 360

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 113/337 (33%), Positives = 177/337 (52%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE      ++ +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E + + +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESRRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A+++  E  KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      + ++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIE 342


>gi|16760669|ref|NP_456286.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|16765117|ref|NP_460732.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|29141572|ref|NP_804914.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62180340|ref|YP_216757.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161613728|ref|YP_001587693.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|168241358|ref|ZP_02666290.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168259999|ref|ZP_02681972.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168462748|ref|ZP_02696679.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|168820514|ref|ZP_02832514.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194443280|ref|YP_002041026.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194448370|ref|YP_002045819.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194471193|ref|ZP_03077177.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197250213|ref|YP_002146253.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|198242115|ref|YP_002215369.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|200389390|ref|ZP_03216001.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|207856717|ref|YP_002243368.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|213051786|ref|ZP_03344664.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213426495|ref|ZP_03359245.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213617488|ref|ZP_03372314.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|213648795|ref|ZP_03378848.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|238913676|ref|ZP_04657513.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|289827376|ref|ZP_06545996.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|61230201|sp|P0A287|RF1_SALTY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|61230203|sp|P0A288|RF1_SALTI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|75482992|sp|Q57NN5|RF1_SALCH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039989|sp|A9MW04|RF1_SALPB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238690045|sp|B5F4H6|RF1_SALA4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238690378|sp|B5FU19|RF1_SALDC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238690453|sp|B5R3J9|RF1_SALEP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238690683|sp|B4TKA4|RF1_SALHS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238693511|sp|B4SUG2|RF1_SALNS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|25299687|pir||AB0720 peptide chain release factor 1 (RF-1) [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|154104|gb|AAA88611.1| release factor 1 [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|16420306|gb|AAL20691.1| peptide chain release factor RF-1 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|16502965|emb|CAD02131.1| peptide chain release factor 1 (RF-1) [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29137199|gb|AAO68763.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62127973|gb|AAX65676.1| peptide chain release factor RF-1 [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161363092|gb|ABX66860.1| hypothetical protein SPAB_01453 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401943|gb|ACF62165.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194406674|gb|ACF66893.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194457557|gb|EDX46396.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|195633960|gb|EDX52312.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197213916|gb|ACH51313.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197936631|gb|ACH73964.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199601835|gb|EDZ00381.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205339285|gb|EDZ26049.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205342722|gb|EDZ29486.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205351018|gb|EDZ37649.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|206708520|emb|CAR32841.1| Peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|261246962|emb|CBG24779.1| RF-1 [Salmonella enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267993724|gb|ACY88609.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301158300|emb|CBW17799.1| peptide chain release factor 1 (RF-1) [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312912765|dbj|BAJ36739.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|320085723|emb|CBY95501.1| Peptide chain release factor 1 RF-1 [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321224404|gb|EFX49467.1| Peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322714814|gb|EFZ06385.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|323130046|gb|ADX17476.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|326623115|gb|EGE29460.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|332988663|gb|AEF07646.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 360

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 113/337 (33%), Positives = 177/337 (52%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE      ++ +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E + + +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A+++  E  KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      + ++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIE 342


>gi|302785810|ref|XP_002974676.1| hypothetical protein SELMODRAFT_174481 [Selaginella moellendorffii]
 gi|300157571|gb|EFJ24196.1| hypothetical protein SELMODRAFT_174481 [Selaginella moellendorffii]
          Length = 412

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 106/347 (30%), Positives = 180/347 (51%), Gaps = 12/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+A Q    L  K  DP +  +  E + L +    ++  ++  ++ ++   +   L E+
Sbjct: 59  LDSAEQTYKELTVKLADPDVANDPSEFQKLAKAIADMEEVVTSYQKYKESQRELDDLQEM 118

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D  + +   +    +K  +   +       L S   DS +  LEV AG GG E+ 
Sbjct: 119 IKSSGDKELAEMAVEESAILKENITNLEEYLKVLLLPSDPLDSRNIMLEVRAGTGGDEAG 178

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            WA  L+RMY ++AE+ ++    +   + E+ G K   L I G   Y  LK E GVHR+ 
Sbjct: 179 IWAGDLVRMYQKYAEQNRWNWSPISQTEAEKGGFKEYVLEITGDRVYSKLKYESGVHRVQ 238

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P   D +E+ I   D  + T R+ GAGGQ+VN  ++AV 
Sbjct: 239 RVPATESQGRVHTSTATVAIMP-EVDEVEVVIDPKDIELTTARSGGAGGQNVNKVETAVD 297

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           + H PTG+ + C +ER+Q KNKA+A+ +LRAKLYE++L +++E   I    ++++G G  
Sbjct: 298 LFHKPTGIRIFCTEERTQLKNKARAFQLLRAKLYEMKLAEQQE--KISSQRRSQVGTGAR 355

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y  +    V D RT I        L G+++  ++A  A+++
Sbjct: 356 SEKIRTYNYKD-NRVSDHRTKI-NFDLDSFLSGNIESAVQACAAMEQ 400


>gi|256419486|ref|YP_003120139.1| peptide chain release factor 1 [Chitinophaga pinensis DSM 2588]
 gi|256034394|gb|ACU57938.1| peptide chain release factor 1 [Chitinophaga pinensis DSM 2588]
          Length = 354

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 105/339 (30%), Positives = 173/339 (51%), Gaps = 10/339 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LILLE 74
               R   ++    +P +  +  +   L +E + L+  +         L +      +LE
Sbjct: 7   AIKGRFEQVSLALTNPEIVSDNKQFSKLSKEYRQLEKIVKVYDAYMKTLDNIAFNKEVLE 66

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
              EE      +ET         +    +   +     D  +A LE+  G GG E+  +A
Sbjct: 67  SGDEEMRELAKEETEALQLLKDEQEADIRNLLIPKDPQDEKNAMLEIRGGTGGDEASLFA 126

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+ E + + T  +    G   G K   + + G + YG LK E GVHR+ R+ 
Sbjct: 127 GDLLRMYLRYCETKGWSTSIMNETPGAAGGYKEVVVEVTGDDVYGTLKFESGVHRVQRVP 186

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ + P   + +++EI ++D ++DT+R+SGAGGQHVN T+SAVR+TH
Sbjct: 187 ATETQGRVHTSAATVAILP-EAEEVDVEIRDADIKMDTFRSSGAGGQHVNKTESAVRLTH 245

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IP+GVVV+CQ+ RSQH N+  A  MLR+++YE  ++K EE   I    K+ +  G +   
Sbjct: 246 IPSGVVVECQEGRSQHSNRDIAMKMLRSRIYEAAVRKHEE--AIASQRKSLVSTGDRSAK 303

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   V D R  +   +    ++GD+ + ++A 
Sbjct: 304 IRTYNY-PQGRVTDHRIGMTMYNLDAFMNGDIQEMVQAL 341


>gi|56413303|ref|YP_150378.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197362228|ref|YP_002141865.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|81599266|sp|Q5PCQ9|RF1_SALPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238690759|sp|B5BI75|RF1_SALPK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56127560|gb|AAV77066.1| peptide chain release factor 1 (RF-1) [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197093705|emb|CAR59177.1| peptide chain release factor 1 (RF-1) [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
          Length = 360

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 112/337 (33%), Positives = 177/337 (52%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE      ++ +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E + + +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDS++RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSSIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A+++  E  KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      + ++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIE 342


>gi|315223860|ref|ZP_07865708.1| peptide chain release factor RF2 [Capnocytophaga ochracea F0287]
 gi|314946190|gb|EFS98191.1| peptide chain release factor RF2 [Capnocytophaga ochracea F0287]
          Length = 315

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 141/308 (45%), Positives = 213/308 (69%), Gaps = 2/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRE +     +   +E ++   D  +LL+   E +  +   +         +E    +F 
Sbjct: 1   MRELRTKKKWVEDYEEAENLTSDIEVLLDFFKEGEATAEDVDHQYTQALHAIEAL--EFR 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LS E D+  A L++ AGAGGTES DWA+MLLRMYT W   +K+K + L   +G+ AGI
Sbjct: 59  NMLSDEGDTMSAVLQITAGAGGTESCDWASMLLRMYTMWCNNQKYKVKTLNFQEGDVAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T+ I+G  A+G+LKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDD+IEI+I+ 
Sbjct: 119 KTVTIEIEGEYAFGYLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIDINP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D   +T R+SGAGGQ+VN  ++AVR+ H PTG++++  + RSQ  NK +A  +L+++LY
Sbjct: 179 ADITFETMRSSGAGGQNVNKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQLLKSQLY 238

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KR+   +  E+ K +I WG QIR+YV+ PY++VKD+RTN E T    V++G+LD+
Sbjct: 239 EIELKKRQAKRDEIEAGKMKIEWGSQIRNYVMHPYKLVKDVRTNYESTDVDSVMNGELDE 298

Query: 346 FMKATLAI 353
           F+KA L +
Sbjct: 299 FLKAYLML 306


>gi|77920283|ref|YP_358098.1| peptide chain release factor 1 [Pelobacter carbinolicus DSM 2380]
 gi|119361572|sp|Q3A129|RF1_PELCD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|77546366|gb|ABA89928.1| bacterial peptide chain release factor 1 (bRF-1) [Pelobacter
           carbinolicus DSM 2380]
          Length = 356

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 108/345 (31%), Positives = 173/345 (50%), Gaps = 11/345 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL- 70
           +F+  +    R   +     DP +         L RE   L + ++  +E +    D   
Sbjct: 2   IFNKLEEVEDRFREVEGLLSDPQVVSQQKRFLELTREHAELSSVVAVYREYKRVSEDIEG 61

Query: 71  --ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              LL+ +  E       E  +     +   +  +   L     D  +  LE+ AG GG 
Sbjct: 62  NRELLQDSDPEMREMAKAELPELEAHREELAQQLKVLLLPKDPNDDKNVILEIRAGTGGD 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AE + +K E + + D E  G K    +I G   Y  LK E G H
Sbjct: 122 EAALFAGDLFRMYSRFAEGQGWKVETMSVSDSEAGGFKEIIAMISGNRVYSQLKYESGTH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS  ++ V P   + ++++I  +D RID YRASGAGGQHVN T+S
Sbjct: 182 RVQRVPETEAQGRIHTSACTVAVLP-EAEDVDVDIDPTDLRIDVYRASGAGGQHVNKTES 240

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTGVVV CQ E+SQHKNKA+A  +L++++ +  +   ++ A +    K+++G 
Sbjct: 241 AVRITHVPTGVVVSCQDEKSQHKNKAKAMKVLKSRILDQVMA--DQQAQMAADRKSQVGS 298

Query: 309 GRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G +   IR+Y   P     D R  +       ++ G+L + ++  
Sbjct: 299 GDRSQRIRTYNF-PQGRCTDHRIGLTLYRLEGIMQGNLSELVEPL 342


>gi|120405293|ref|YP_955122.1| peptide chain release factor 1 [Mycobacterium vanbaalenii PYR-1]
 gi|166223576|sp|A1TD66|RF1_MYCVP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119958111|gb|ABM15116.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium
           vanbaalenii PYR-1]
          Length = 357

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 121/346 (34%), Positives = 171/346 (49%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +     L  +  DP L  +   AK + R    +   +S   +++    D     EL
Sbjct: 8   IEAILAEYGELEQRLADPELHADPAAAKKVGRRFAQISPIVSTYHKLEAARGDLEAAREL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               DD S   E  +   ++    +            D++D  LEV +G GG ES  +A 
Sbjct: 68  --AADDASFAAEVDELTTKVADLDDRLTDLLAPRDPHDADDIVLEVKSGEGGEESALFAA 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-----KGPNAYGWLKGEQGVHRL 190
            L RMY R+AE+  +    L     +  G K ATL I          +  LK E GVHR+
Sbjct: 126 DLARMYIRYAERHGWTVTMLGETTSDLGGYKDATLSIAGKGDSADGVWSRLKFEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + VYP  D+  +++I ESD RID YR+SG GGQ VNTTDSAV
Sbjct: 186 QRVPVTESQGRVHTSAAGVLVYPEPDEVEQVQIDESDLRIDVYRSSGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG+VV CQ ERSQ +NKA+A  +L A+L  L  ++    A+   +S+   +   
Sbjct: 246 RITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQALAEEQASADASADRASQIRTVDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N +  +   VLDGDLD    A  A  K
Sbjct: 306 ERIRTYNY-PENRIADHRINYKSHNLDQVLDGDLDPLFDALAAADK 350


>gi|325914250|ref|ZP_08176600.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325539505|gb|EGD11151.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 361

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 112/345 (32%), Positives = 175/345 (50%), Gaps = 8/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L     DP +  N  + + L RE   L+     +++      D      +
Sbjct: 9   LEALAERREELQHLLSDPDVVNNNDKFRSLSRELSQLEPVAIALEDEARAKADLSAAEAM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E     Q    E++ +     +     D  + +LEV AG GG E+  +A
Sbjct: 69  RNDPEMRELAEEEIAAAQARLDELDAQLALLLVPRDPRDDGNLFLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+AE++ +K E      GE  G K     + G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ + P  DD  EI I+ +D ++DT+R+SGAGGQHVN T+SA+RITH
Sbjct: 189 ATESQGRIHTSAATVAIIPEADDIEEIVINPADLKVDTFRSSGAGGQHVNKTESAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311
           +P+GVVV+CQ ERSQH N+ +A   L+A+L E E  K    A   ++ K ++G G    +
Sbjct: 249 VPSGVVVECQTERSQHANRDKAMKRLKAQLVEAERSK--AAAAEAQTRKLQVGSGDRSQR 306

Query: 312 IRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R   +      ++++GDLD  +   L   +
Sbjct: 307 IRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIARLLHEHQ 350


>gi|306820781|ref|ZP_07454406.1| peptide chain release factor RF2 [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551171|gb|EFM39137.1| peptide chain release factor RF2 [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 316

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 146/312 (46%), Positives = 210/312 (67%), Gaps = 2/312 (0%)

Query: 40  IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV 99
             A+ ++++ + L+  I   + ++++  D L+L + A ++      +E S     ++   
Sbjct: 2   ENAQKILKKSKSLEKKIEEYEMVKNKFEDILVLFDFASQDSSFE--EELSKETDNLEKIT 59

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
           +      +L+G+ D+N+A L VH+G GG ++QDW  MLLRMYTR+A    FK   +++  
Sbjct: 60  DSLSISIMLNGQYDANNAILSVHSGTGGLDAQDWTQMLLRMYTRFASNMGFKISYIDLQQ 119

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
            +++G+KSATL I G NAYG+LK E+GVHRLVRISP+DS+ +RHTSF+S+ V P +DDSI
Sbjct: 120 DDQSGVKSATLKIDGENAYGYLKCEKGVHRLVRISPFDSSGKRHTSFASVDVLPELDDSI 179

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           ++EI+  D ++DTYR+SGAGGQHVN T+SA+RITHIPTGVVVQCQ ERSQ  N+  A  M
Sbjct: 180 KVEINPKDLKVDTYRSSGAGGQHVNKTESAIRITHIPTGVVVQCQNERSQISNRETAMKM 239

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           L AKL EL+  + ++     +   ++I WG QIRSYV QPY MVKD RTN E  +   V+
Sbjct: 240 LTAKLIELKELEHKDKIEDIQGKYSQIAWGSQIRSYVFQPYTMVKDHRTNYEVGNIGSVM 299

Query: 340 DGDLDDFMKATL 351
           DGD+  F+ A L
Sbjct: 300 DGDIMPFINAYL 311


>gi|309812101|ref|ZP_07705859.1| peptide chain release factor 1 [Dermacoccus sp. Ellin185]
 gi|308433788|gb|EFP57662.1| peptide chain release factor 1 [Dermacoccus sp. Ellin185]
          Length = 362

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 113/352 (32%), Positives = 169/352 (48%), Gaps = 13/352 (3%)

Query: 13  LFDWDN-AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D     V     L  +  +P    +    + L +    L   ++     +    D   
Sbjct: 1   MLDSAATIVAEYDDLEKQLAEPATHADPTLMRRLNKRYAALAPTVAAYHAWKRAQDDLGA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             ELA E+   +              +            E D  D  LEV AG GG ES 
Sbjct: 61  AEELADEDAAFAAELPALQTHLDASADKLRTLLL--PRDEDDERDVVLEVKAGEGGAESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGE 184
            +A  L+RMY R+AE+R +K E  +  D +  G K A + +        G   +  LK E
Sbjct: 119 LFAGDLVRMYLRYAERRGWKAEIADATDADLGGYKDARITVRAKGLPEPGEAPWARLKYE 178

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE-ISESDCRIDTYRASGAGGQHV 243
            GVHR+ R+   +S  R HTS + + V P +D+  +      +D +ID YR+SG GGQ V
Sbjct: 179 GGVHRVQRVPVTESQGRIHTSAAGVLVMPDLDEDDDEIEFGPNDLKIDVYRSSGPGGQSV 238

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVRITH+PTGVVV CQ E+SQ +NK  A  +L+A+L ++E++++E  A+    S+
Sbjct: 239 NTTDSAVRITHLPTGVVVSCQNEKSQLQNKESALRVLKARLRQMEIERKEAEASAARKSQ 298

Query: 304 TE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +    +IR+Y   P   + D RT  +  +   VLDGDLD  +++ L   
Sbjct: 299 VRTVDRSERIRTYNF-PENRIADHRTGYKSYNLDAVLDGDLDAVVQSALDAD 349


>gi|260891992|ref|YP_003238089.1| peptide chain release factor 1 [Ammonifex degensii KC4]
 gi|260864133|gb|ACX51239.1| peptide chain release factor 1 [Ammonifex degensii KC4]
          Length = 355

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 115/345 (33%), Positives = 179/345 (51%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 +   L  K  DP +  +    +  ++    L+  +S  +E +  L        L
Sbjct: 5   LAELETQFEDLTLKIADPEVMADQKRWREYVKRHAELEPIVSTYREYKRVLEGIEEAEML 64

Query: 76  ----ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
                 EE      +E     +R +   +  +   L     D  +  LE+ AG GG E+ 
Sbjct: 65  LDQEQDEELRELAEEELETLKERREELEKELKILLLPKDPNDEKNVILEIRAGTGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AEKR +KTE L     +  G K   +LI+G  AY +LK E GVHR+ 
Sbjct: 125 LFAADLLRMYLRYAEKRGWKTELLSASPTDLGGFKEVVVLIEGRGAYSFLKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS +++ V P   + +++EI   D R+DT+ +SG GGQ VNTT SAVR
Sbjct: 185 RVPVTEASGRIHTSAATVAVLP-EAEEVDVEIDPKDIRVDTFCSSGHGGQSVNTTYSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGR 310
           ITH+PTG+VV CQ ERSQ KN+ +A  +LRA+L +L+ +++E        ++ + G    
Sbjct: 244 ITHLPTGIVVTCQDERSQLKNREKAMKVLRARLLDLKRREQEAAIAAERRAQVKSGDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           ++R+Y   P   V D R N+      ++L+GDLD+ + A  A  +
Sbjct: 304 RVRTYNF-PQNRVTDHRINLTLYRLEEILEGDLDELITALAAADQ 347


>gi|262279542|ref|ZP_06057327.1| peptide chain release factor 1 [Acinetobacter calcoaceticus
           RUH2202]
 gi|262259893|gb|EEY78626.1| peptide chain release factor 1 [Acinetobacter calcoaceticus
           RUH2202]
          Length = 362

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 113/339 (33%), Positives = 168/339 (49%), Gaps = 7/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    + L RE   L        + +    D      +
Sbjct: 9   LDQLCDRHEELTALLADVEVISDNKRFRKLSREHSDLSEITEVWGKYRQAEEDIETAELM 68

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E     + +            +     DSN AYLE+ AG GG E+  ++
Sbjct: 69  KSDPDFKDMAEEEIQANKALLGELESQLNILMIPKDPNDSNAAYLEIRAGTGGDEAAIFS 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+++AE + ++ E L  ++GE  G K     + G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSKYAETQNWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P +D    +EI+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG VV+CQ+ERSQHKNKA+A  +L ++L   +       A   E  +  +G G    +
Sbjct: 249 IPTGTVVECQEERSQHKNKAKAMALLVSRLENAKR--AAADAATSEMRRDLVGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   + D R N+       +++GDL + + + 
Sbjct: 307 IRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 344


>gi|149914649|ref|ZP_01903179.1| peptide chain release factor 1 [Roseobacter sp. AzwK-3b]
 gi|149811442|gb|EDM71277.1| peptide chain release factor 1 [Roseobacter sp. AzwK-3b]
          Length = 351

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 178/341 (52%), Gaps = 14/341 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +QR  +L  +        ++     L RE   L   +  I+  +  L D      +
Sbjct: 9   LNEILQRFEYLEAQMSAGG--GDIA---KLGREYAELRPVVEEIRAYRQVLDDLEAARAM 63

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E    LQ  K    E  Q   L   +AD+  A LE+  G GG E+  +A
Sbjct: 64  LADPEMRDLAEEELTALQARKPKLEEQLQLALLPKDKADARPAILEIRPGTGGEEAALFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE R +  E +E ++ E  GIK     + G + +  LK E GVHR+ R+ 
Sbjct: 124 GDLLRMYHRYAEARGWSFEIIEQNETELGGIKEVIARVAGDHVFARLKFESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++++I   D RIDT R+SGAGGQHVNTTDSAVRITH
Sbjct: 184 ETESGGRIHTSAATVAVLP-EAEDVDVQIDPGDLRIDTMRSSGAGGQHVNTTDSAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV    E+SQH+N+  A  +L+ +LY+LE Q+  +  +   +   ++G G    +
Sbjct: 243 LPTGIVVTSS-EKSQHRNREIAMQVLKTRLYDLERQRAADERSASRA--AQVGTGDRSER 299

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       V+ GDLD+ + A  A
Sbjct: 300 IRTYNF-PQGRMTDHRINLTLYKLDQVMQGDLDEVIDALRA 339


>gi|168237830|ref|ZP_02662888.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|197289243|gb|EDY28610.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
          Length = 360

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 113/337 (33%), Positives = 176/337 (52%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE      ++ +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E + + +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESRRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A ++  E  KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGACIHAAETAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      + ++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIE 342


>gi|299066996|emb|CBJ38191.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia
           solanacearum CMR15]
          Length = 300

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 160/298 (53%), Positives = 220/298 (73%), Gaps = 1/298 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  + ++ + L     L ELA EE D   ++    +   ++  VE  +F  + SG  D+ 
Sbjct: 2   VFALTKLDEDLTGGAELFELAREEGDDDTIEAVETDTAGMRAIVEDMEFRRMFSGPMDAA 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           + ++++ AGAGGTE+ DWA+MLLR Y ++ E++ FKTE LE  +G+ AGIKSA+L ++G 
Sbjct: 62  NCFIDIQAGAGGTEACDWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASLKVEGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+G+L+ E GVHRLVR SP+DS   RHTSFSSI+VYP VDDSIEIE++ +D R+DTYRA
Sbjct: 122 YAFGFLRTETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQH+N TDSAVRITHIPTG+VVQCQ +RSQH+N+A+A  ML+++LYE EL+KR+  
Sbjct: 182 SGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAE 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           A+  E+SKT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 242 ADKLEASKTDVGWGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDAFIEASLKQ 298


>gi|169826579|ref|YP_001696737.1| peptide chain release factor 1 [Lysinibacillus sphaericus C3-41]
 gi|238688208|sp|B1I069|RF1_LYSSC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|168991067|gb|ACA38607.1| Peptide chain release factor 1 (RF-1) [Lysinibacillus sphaericus
           C3-41]
          Length = 358

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 103/351 (29%), Positives = 174/351 (49%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD       R   L     DP +  +  + +   +E+  +   +   +E ++     + 
Sbjct: 1   MFDRLQAVEDRYERLTELLSDPDIVNDSKKLREYSKEQSDIQETVDTYREYKNVKEQLVD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             E+   E D  + +   +    +K + E  +       +     D+ +  +E+   AGG
Sbjct: 61  TREMLDSEKDPDMHEMVKEEFNLLKAQQEELEERLRILLIPKDPNDNKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +K + +E       G K    +I G  AY   K E G 
Sbjct: 121 DEANIFAGDLFRMYSRYAETQGWKIDIMEATPNPMGGYKEVIFMINGQGAYSKFKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P   + +++EI E D R+DT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRVPATESQGRIHTSTATVACLP-EVEEVDVEIHEKDIRVDTFASSGAGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV  Q ERSQ KN+ +A  +LRA++ ++ +Q  E    I  + K+ +G
Sbjct: 240 SAVRMTHLPTGVVVSMQDERSQIKNREKAMKILRARVADMYMQ--EAQKEIDATRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G LD+ +   +  ++
Sbjct: 298 SGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIVEGRLDEIIDTLILEEQ 347


>gi|291541665|emb|CBL14775.1| bacterial peptide chain release factor 1 (bRF-1) [Ruminococcus
           bromii L2-63]
          Length = 357

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 114/351 (32%), Positives = 200/351 (56%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL---CD 68
           +F+  +   +R S L+ +   P +  N  E + +M+E + ++  +   ++ ++ +    D
Sbjct: 1   MFEKIEIFDKRYSELSERLYQPSVAGNPEEYQKIMKEIKSIEEIVLTYRKYKEAVQTEKD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127
           +L +LE   +++   + Q   D  +     +    +   L     D  +  +E+  GAGG
Sbjct: 61  SLEILEETSDKELKELAQIELDEAKDNIKNLAEDLKILLLPKDPNDERNVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            ES  ++ +L RMY+ +AEK+ FK E +  ++ E  G K  + +I+G  AY   K E GV
Sbjct: 121 EESALFSAVLFRMYSMYAEKKGFKIEIINANETEIGGYKEISFMIEGEGAYSRFKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +E+EI  +D +IDT+R+SGAGGQH+N T 
Sbjct: 181 HRVQRVPETESQGRVHTSTTTVAVLP-EAEDVELEIDPNDLKIDTFRSSGAGGQHINKTS 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SA+RITH+PTG+VV+CQ ERSQ+KNK +A  +L+++L  L+ ++ ++ + I E+ K ++G
Sbjct: 240 SAIRITHLPTGMVVECQDERSQYKNKDKALKVLKSRL--LKEKQDKQASEIAENRKMQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +      ++L+G LD+ + A +A  +
Sbjct: 298 TGDRSERIRTYNY-PQGRVTDHRIGLTLYKLEEILNGSLDEVIDALVAADR 347


>gi|212637017|ref|YP_002313542.1| peptide chain release factor 2 [Shewanella piezotolerans WP3]
 gi|212558501|gb|ACJ30955.1| Peptide chain release factor 2 [Shewanella piezotolerans WP3]
          Length = 293

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 157/291 (53%), Positives = 206/291 (70%), Gaps = 1/291 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+EEDD     + S  L  ++  +E  +F  + SG  D+ D YL++
Sbjct: 1   MDSGLEDIEGLLELAVEEDDEETFNDASAELDDLEKRLEELEFRRMFSGPHDAADCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GGTE+QDWANM+LRM+ RW E   +K E +E+ DG+ AGIK AT+   G  A+G L
Sbjct: 61  QSGSGGTEAQDWANMVLRMFLRWGEAHDYKPELIEVTDGDVAGIKGATIKFTGEYAFGSL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SA+RITH+PT  VVQCQ +RSQHKN+  A   L+AKLYELE+ ++       E 
Sbjct: 181 HVNKTESAIRITHVPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLRQNADKQAAED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 241 AKSDIGWGSQIRSYVLDD-ARIKDLRTGVENRNTQSVLDGDLDKFIEASLK 290


>gi|299769517|ref|YP_003731543.1| peptide chain release factor 1 [Acinetobacter sp. DR1]
 gi|298699605|gb|ADI90170.1| peptide chain release factor 1 [Acinetobacter sp. DR1]
          Length = 362

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 113/339 (33%), Positives = 168/339 (49%), Gaps = 7/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    + L RE   L        + +    D      +
Sbjct: 9   LDQLCDRHEELTALLADVEVISDNKRFRKLSREHSDLSEITEVWGKYRQAEEDIETAEMM 68

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E     + +            +     DSN AYLE+ AG GG E+  ++
Sbjct: 69  KSDPDFKDMAEEEIQANKDLLVELESQLNILMIPKDPNDSNAAYLEIRAGTGGDEAAIFS 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+++AE + ++ E L  ++GE  G K     + G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSKYAETQNWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P +D    +EI+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG VV+CQ+ERSQHKNKA+A  +L ++L   +       A   E  +  +G G    +
Sbjct: 249 IPTGTVVECQEERSQHKNKAKAMALLVSRLENAKR--AAADAATSEMRRDLVGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   + D R N+       +++GDL + + + 
Sbjct: 307 IRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 344


>gi|254785320|ref|YP_003072749.1| peptide chain release factor 2 [Teredinibacter turnerae T7901]
 gi|242667502|gb|ACS93539.1| peptide chain release factor 2 [Teredinibacter turnerae T7901]
          Length = 300

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 158/297 (53%), Positives = 214/297 (72%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  I+ +   + D   L++LA+EE+D   L++    +  ++ ++   +F  + SGE D+N
Sbjct: 2   VETIENLDHGVTDCRDLIDLAVEENDEDSLEDVQSEIDSLEAQLAILEFRRMFSGEMDAN 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +A+L++ +G+GGTE+QDWA M+LRMY RW E + FKT   E   GE AGIKSAT+  +G 
Sbjct: 62  NAFLDIQSGSGGTEAQDWAEMILRMYLRWGEDKGFKTTLEEASAGEVAGIKSATIRFEGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+GWL+ E GVHRLVR SP+DS +RRHTSF+S++V P +DD IEI+I+ +D R+DTYRA
Sbjct: 122 YAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVSPEIDDDIEIDINPADLRVDTYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN TDSAVRITH PTG+VVQCQ ERSQH N+ +A  MLRA++YE E+ KR   
Sbjct: 182 SGAGGQHVNKTDSAVRITHEPTGIVVQCQSERSQHSNRDKAMKMLRARMYEHEILKRNAE 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E SK++IGWG QIRSYVL     +KDLRT I+ ++   VLDG LDDF++A+L 
Sbjct: 242 KQALEDSKSDIGWGSQIRSYVLDDQ-RIKDLRTGIQTSNCQAVLDGKLDDFIEASLK 297


>gi|254447294|ref|ZP_05060761.1| peptide chain release factor 2 [gamma proteobacterium HTCC5015]
 gi|198263433|gb|EDY87711.1| peptide chain release factor 2 [gamma proteobacterium HTCC5015]
          Length = 300

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 160/297 (53%), Positives = 210/297 (70%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  +  I   L D   L+E+A EE D   L    D++  +   VE  +F  + SGE D  
Sbjct: 2   VRGLDRITSGLGDAGDLIEMAKEEGDEETLAAVEDDIAELTDAVENLEFRRMFSGEMDEK 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +AYL++ AG+GGTE+QDWANMLLRMY RW ++  FK E +E+ +G+ AGIKSAT+ I+G 
Sbjct: 62  NAYLDIQAGSGGTEAQDWANMLLRMYLRWCDQHGFKNEIVELSEGDVAGIKSATIHIQGD 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+GWL+ E GVHRLVR SP+DS  RRHTSF+S+++ P VDDS +I+I+ +D R+DTYR+
Sbjct: 122 YAFGWLRTETGVHRLVRKSPFDSGGRRHTSFASVFLSPEVDDSFDIDINPADLRVDTYRS 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVNTTDSAVRITH P+GVVV CQ +RSQH N+  A   L+AKL+ELE+QKR  +
Sbjct: 182 SGAGGQHVNTTDSAVRITHAPSGVVVSCQNQRSQHANRDFAMKQLKAKLWELEMQKRNAV 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E +K +IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L 
Sbjct: 242 KQEAEDNKADIGWGSQIRSYVLD-ASRIKDLRTGVETGNTQAVLDGSLDPFIEASLK 297


>gi|89897680|ref|YP_521167.1| peptide chain release factor 1 [Desulfitobacterium hafniense Y51]
 gi|89337128|dbj|BAE86723.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 360

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 109/345 (31%), Positives = 175/345 (50%), Gaps = 11/345 (3%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              +R   L     DP +  N  E +   + +  + + +   +E  + +        L  
Sbjct: 12  EIERRYDELTQLLSDPEVIGNQSEWQKYAKAQAGMTDIVEAFREYSEVVKHLEETQGLLE 71

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E+ D    +     L+ +  + +  +       L     D  +  +E+ AGAGG E+  +
Sbjct: 72  EKLDPEFKEMAELELEELTEKRDELEEKMRILLLPKDPNDDKNVIMEIRAGAGGEEAALF 131

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMYT++AE++ ++TE L     +  G K    LI+G  AY  LK E GVHR+ R+
Sbjct: 132 AGDLYRMYTKYAEQQGWRTELLSASYTDIGGFKEIIFLIEGQGAYSKLKFESGVHRVQRV 191

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS +++ V P   + +++ I+ +D RID + +SG GGQ VNTT SAVRIT
Sbjct: 192 PTTESGGRIHTSTTTVAVLP-EAEEVDVAINPNDLRIDIFCSSGPGGQSVNTTQSAVRIT 250

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG VV CQ E+SQ KNK +A  +LRA+L  LE  + E +  +    ++++G G    
Sbjct: 251 HVPTGTVVSCQDEKSQLKNKEKALRVLRARL--LERAQEEAMGELASERRSQVGTGDRSE 308

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +       +L G+LD+ + A +   +
Sbjct: 309 RIRTYNF-PQGRVTDHRIGLTLHRLDSILLGELDEVINALITTDQ 352


>gi|302036343|ref|YP_003796665.1| peptide chain release factor RF-1 [Candidatus Nitrospira defluvii]
 gi|300604407|emb|CBK40739.1| Peptide chain release factor RF-1 [Candidatus Nitrospira defluvii]
          Length = 386

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 119/345 (34%), Positives = 180/345 (52%), Gaps = 12/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN---AISFIKEIQDRLCDNLIL 72
           W+    R   L  +  DP +         L +ER  L+          E + +L D   L
Sbjct: 35  WEGMAARFQELTNQLMDPSVLNQPGMIHKLNKERTELEEPALQFIAYCEAKKQLEDVSAL 94

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTES 130
           L+ A    D   L     +  + ++     + +  L+ +      + +LE+ AG GG E+
Sbjct: 95  LQDASTGADMKQLFAEESDHLQQQVLEIEHRAKDFLTPKDPRDEKNMFLEIRAGTGGDEA 154

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY ++AE+ + K E ++  +    G +    L++G  AYG L+ E GVHR+
Sbjct: 155 ALFAGDLFRMYLKYAERNRLKLEVVDASETGIGGYREVIALLEGKGAYGRLRYESGVHRV 214

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +++ R HTS  ++ V P   D +E+ I   D RIDT+ +SGAGGQ VNTT SAV
Sbjct: 215 QRVPTTEASGRIHTSTVTVAVMP-EVDEVEVHIDPKDLRIDTFCSSGAGGQSVNTTYSAV 273

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTGVVV CQ ERSQ KN+ +A   LRA++ E E +K+E    I ++ K+++G G 
Sbjct: 274 RITHIPTGVVVSCQDERSQLKNRTKAMRNLRARIVEAEREKQEAE--IAQNRKSQVGTGD 331

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              +IR+Y   P   V D R  +       VL GDL++ ++A  A
Sbjct: 332 RSEKIRTYNF-PQNRVTDHRIGLTVHKLDQVLAGDLEEIVQALRA 375


>gi|17545749|ref|NP_519151.1| peptide chain release factor 2 protein [Ralstonia solanacearum
           GMI1000]
 gi|17428043|emb|CAD14732.1| probable peptide chain release factor 2 (rf-2) protein [Ralstonia
           solanacearum GMI1000]
          Length = 300

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 160/298 (53%), Positives = 220/298 (73%), Gaps = 1/298 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  + ++ + L     L ELA EE D   ++    +   ++  VE  +F  + SG  D+ 
Sbjct: 2   VFALTKLDEDLTGGAELFELAREEGDDDTIEAVEADTAGMRAIVEDMEFRRMFSGPMDAA 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           + ++++ AGAGGTE+ DWA+MLLR Y ++ E++ FKTE LE  +G+ AGIKSA+L ++G 
Sbjct: 62  NCFIDIQAGAGGTEACDWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASLKVEGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+G+L+ E GVHRLVR SP+DS   RHTSFSSI+VYP VDDSIEIE++ +D R+DTYRA
Sbjct: 122 YAFGFLRTETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQH+N TDSAVRITHIPTG+VVQCQ +RSQH+N+A+A  ML+++LYE EL+KR+  
Sbjct: 182 SGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAE 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           A+  E+SKT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 242 ADKLEASKTDVGWGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDAFIEASLKQ 298


>gi|218682869|ref|ZP_03530470.1| peptide chain release factor 2 [Rhizobium etli CIAT 894]
          Length = 267

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 198/250 (79%), Positives = 228/250 (91%)

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
           E++LSGEA     YLEVH+GAGGTESQDWANMLLRMYTRWAE+++FK E LE+HDGEEAG
Sbjct: 5   EAMLSGEARQQRHYLEVHSGAGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDGEEAG 64

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           IKSATLL+KG NAYGWLK E GVHRLVRISPYDSN+RRHTSFSSIWVYPVVDDSI+IEI+
Sbjct: 65  IKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVVDDSIQIEIN 124

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           ESDCRIDTYR+SGAGGQHVNTTDSAVRITH+PTG+VVQCQQERSQHKN+A+AW+MLRA++
Sbjct: 125 ESDCRIDTYRSSGAGGQHVNTTDSAVRITHMPTGIVVQCQQERSQHKNRAKAWDMLRARM 184

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           YE EL+KRE+ AN   +SKT+IGWG QIRSYVLQPYQ+VKDLRT +  T+P DVLDGDL+
Sbjct: 185 YEAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVASTAPDDVLDGDLN 244

Query: 345 DFMKATLAIK 354
           +FM+A LA +
Sbjct: 245 EFMEAALAHR 254


>gi|91792280|ref|YP_561931.1| peptide chain release factor 1 [Shewanella denitrificans OS217]
 gi|119361603|sp|Q12QR8|RF1_SHEDO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91714282|gb|ABE54208.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
           denitrificans OS217]
          Length = 361

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 108/339 (31%), Positives = 181/339 (53%), Gaps = 9/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72
            +  ++R   +     D  +  +    + L +E   L++ +   K  Q    D      +
Sbjct: 9   LEGLLERNEEVLAMLGDATVISDQERFRALSKEYSQLEDVVKSFKAFQQAQLDLASAKEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L+    E      +E     + I+   +  Q   L     D  +A+LE+ AGAGG E+  
Sbjct: 69  LQEDDAEMREMAQEEMKAAKKVIEQLEDELQILLLPKDPNDDTNAFLEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+ E  K++ E + +++ +  G K   + + G   YG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRFCEANKWQVEVMNVNEADLGGFKEIIVKVSGEGVYGKLKYESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   V ++  I I+ +D ++DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRVHTSACTVVVLHEVPEAEAISINPADLKVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIP+G++V+CQ +RSQHKN+AQA ++L A++  +E +KR        + ++ +  G   
Sbjct: 249 THIPSGIIVECQDQRSQHKNRAQAMSVLAARIQAIEDEKRRSAEET--TRRSLVASGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +IR+Y   P   V D R N+     +++++GDL+  ++
Sbjct: 307 ERIRTYNY-PQGRVSDHRINLTLYRLNEIMEGDLNALLE 344


>gi|327395061|dbj|BAK12483.1| peptide chain release factor 2 PrfB [Pantoea ananatis AJ13355]
          Length = 293

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 162/290 (55%), Positives = 208/290 (71%), Gaps = 1/290 (0%)

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D   LL+LA+E DD     E    L  ++ ++   +F  + SGE DS D Y+++ A
Sbjct: 3   QGLEDVQGLLDLAVEADDEETFNEAVAELDALEGKLGELEFRRMFSGEYDSADCYIDLQA 62

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTE+QDWA+ML+RMY RWAE + FKTE +E  +GE AGIKS T+ + G  A+GWL+ 
Sbjct: 63  GSGGTEAQDWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAFGWLRT 122

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS  RRHTSFSS ++YP VDD I+I+I+ +D RID YRASGAGGQHV
Sbjct: 123 ETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIDINPADLRIDVYRASGAGGQHV 182

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRITH+PTG V QCQ +RSQHKNK QA   ++AKLYELE+QK+     + E +K
Sbjct: 183 NRTESAVRITHVPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQMLEDNK 242

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           ++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 243 SDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDRFIEASLKA 291


>gi|304311879|ref|YP_003811477.1| Peptide chain release factor 2 [gamma proteobacterium HdN1]
 gi|301797612|emb|CBL45833.1| Peptide chain release factor 2 [gamma proteobacterium HdN1]
          Length = 300

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 164/298 (55%), Positives = 218/298 (73%), Gaps = 1/298 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  I  +  RL     LL++ +EE+D S+L +    +  I+ +V   +F  + SGE D+N
Sbjct: 2   VGTIDSVSTRLRGARELLDMVVEENDESMLGDVQKEIDGIEADVAKMEFRRMFSGETDAN 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
             YL++ AG+GGTE+QDWA+MLLRMY RW E   FKTE +E+  GE AGIKSAT+ ++G 
Sbjct: 62  SCYLDIQAGSGGTEAQDWADMLLRMYLRWGEDHGFKTELVEVSAGEVAGIKSATIHLEGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+GWL+ E GVHRLVR SP+DS +RRHTSFSS++V P +DD+I IEI+ +D ++DTYRA
Sbjct: 122 YAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSSVFVSPEIDDNIHIEINPADLKVDTYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN T+SA+RITH+P+G+VVQCQ +RSQHKN+ QA   LR+KLYE+E+QKR   
Sbjct: 182 SGAGGQHVNRTESAIRITHVPSGIVVQCQSDRSQHKNRDQAMKQLRSKLYEMEMQKRYVE 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
               E SK +IGWG QIRSYVL     VKDLRTN+E ++   VLDG++D F+KA+L  
Sbjct: 242 KMRQEDSKMDIGWGSQIRSYVLD-QSRVKDLRTNVETSNTEAVLDGEIDLFIKASLKA 298


>gi|16801748|ref|NP_472016.1| peptide chain release factor 1 [Listeria innocua Clip11262]
 gi|116873908|ref|YP_850689.1| peptide chain release factor 1 [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|20139333|sp|Q927V0|RF1_LISIN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|123466615|sp|A0ALM8|RF1_LISW6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|16415223|emb|CAC97913.1| prf1 [Listeria innocua Clip11262]
 gi|116742786|emb|CAK21910.1| peptide chain release factor 1 [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|313617102|gb|EFR89654.1| peptide chain release factor 1 [Listeria innocua FSL S4-378]
          Length = 358

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 103/347 (29%), Positives = 172/347 (49%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   LN    DP +  +    + L +E+  +   +   +E ++         EL
Sbjct: 5   LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQIDETREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKL----EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E+ D  + +   +    ++       E  +   +     D  +  LE+   AGG E+ 
Sbjct: 65  LGEKLDDEMREMAKEEFAELQKEKAELEERLKLLLVPKDPNDDKNVILEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AE R +K E ++ +     G K    ++ G +A+  +K E G HR+ 
Sbjct: 125 LFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P   + +EIE+ + D R DT+ ++GAGGQ VNTT SAVR
Sbjct: 185 RVPETESGGRIHTSTATVAILP-EAEEVEIELHDKDIRTDTFASTGAGGQSVNTTMSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+    +RE       + K+ +G G  
Sbjct: 244 LTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKF--EREAREEYDANRKSAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +++G LD+ + A +   +
Sbjct: 302 SERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQ 347


>gi|325679581|ref|ZP_08159156.1| peptide chain release factor 1 [Ruminococcus albus 8]
 gi|324108611|gb|EGC02852.1| peptide chain release factor 1 [Ruminococcus albus 8]
          Length = 359

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 103/352 (29%), Positives = 171/352 (48%), Gaps = 12/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD       + + +N +   P +  +      LM E + L   +  +KE      +   
Sbjct: 1   MFDKLRALEDKFNEINERLMQPEVVNDSKLYTELMIEYRDLQPIVEKLKEYDKAKAEFDE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVE-----YKQFESLLSGEADSNDAYLEVHAGAG 126
            +E+  +      ++E                    +   L     D  +  +E+  GAG
Sbjct: 61  AVEMMNDGGLDKDMKEMVQEQYDESKTAMAQLEDDLKILLLPKDPNDDRNVIIEIRGGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +AN L RMYT +A ++ ++ + +  ++ E  G K  T  + G  AY  LK E G
Sbjct: 121 GEEAALFANSLYRMYTMYAAQKGWQIDVMSANETELGGYKEITFTVSGQGAYSRLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS  ++ V P  ++       E D +++ +R+SGAGGQH+N T
Sbjct: 181 VHRVQRVPETESQGRVHTSTVTVAVLPEAEEVELDLNEERDIKMEVFRSSGAGGQHINKT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+ HIPTG VV+CQ ERSQ +N+ +A  MLRAKL  L+ + R +   I  + ++++
Sbjct: 241 SSAVRLIHIPTGTVVECQNERSQFQNRDKALKMLRAKL--LDEKVRAQENEIASNRRSQV 298

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   + D R  +       +L+G+LD+ + A     +
Sbjct: 299 GTGDRSEKIRTYNF-PESRISDHRIKLTLYKLEQILNGNLDEVIDALATADQ 349


>gi|154506039|ref|ZP_02042777.1| hypothetical protein RUMGNA_03581 [Ruminococcus gnavus ATCC 29149]
 gi|153793538|gb|EDN75958.1| hypothetical protein RUMGNA_03581 [Ruminococcus gnavus ATCC 29149]
          Length = 314

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 157/310 (50%), Positives = 221/310 (71%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+  + L +++  I+++     D  +L+E++ EE D   +QE  + L R + E E  + +
Sbjct: 1   MQVLKSLQDSVKQIEQMYADYEDLGLLIEMSQEEQDEETVQEIEEELLRFEGEFEELRIQ 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LL+GE D + A + +HAGAGGTES DWANML RMYTRWAEK+ F  E L+  +G+ AGI
Sbjct: 61  TLLTGEYDRDHAIVTLHAGAGGTESCDWANMLYRMYTRWAEKKGFSVEVLDYLEGDVAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K  T  ++G NAYG+L+ E+GVHRLVRISP+++  +R TSF+S  V P +++ I+IEI++
Sbjct: 121 KGVTFEVRGENAYGYLRSEKGVHRLVRISPFNAAGKRQTSFASCDVIPDIEEDIDIEIND 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D RIDTYR+SGAGGQH+N T SA+RITH PTG+VVQCQ ERSQH NK +A  ML+AKLY
Sbjct: 181 DDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVQCQNERSQHMNKDKAMQMLKAKLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            ++ Q++ +  +       EIG+G QIRSYV+QPY +VKD RTN+E ++ + VLDG+LD 
Sbjct: 241 LMKQQEQADKVSGIRGEIKEIGFGSQIRSYVMQPYTLVKDHRTNMEISNVNGVLDGNLDP 300

Query: 346 FMKATLAIKK 355
           F+ A L+  K
Sbjct: 301 FINAYLSAPK 310


>gi|206901574|ref|YP_002251123.1| peptide chain release factor 2 [Dictyoglomus thermophilum H-6-12]
 gi|206740677|gb|ACI19735.1| peptide chain release factor 2 [Dictyoglomus thermophilum H-6-12]
          Length = 330

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 149/316 (47%), Positives = 205/316 (64%), Gaps = 3/316 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W +  + K ++ +   L   I   ++++  + +     +L  E D+     E        
Sbjct: 8   WDDAEKVKPILTKYNKLQKEIENWEKLKADIKELSEWKDLLEEGDEYKEEFEKKLKEV-- 65

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           +  ++  + E +L    D  +A L +HAG GGT++QDW  +LLRMY RWAE++ ++ + L
Sbjct: 66  ENSLKEFEIEMILQDPHDEANAILSLHAGTGGTDAQDWTEILLRMYIRWAERKGYQVKIL 125

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           +I  GEEAGIKSATLLI+G  AYG+LKGE+GVHRLVRISP+D+N RRHTSF+ + V P +
Sbjct: 126 DISPGEEAGIKSATLLIEGDKAYGYLKGEKGVHRLVRISPFDANHRRHTSFALVEVIPEL 185

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
            +S  IEI   D +I+T+RA GAGGQHVN  +SAVRITHIPTG+VVQCQ ERSQH NK  
Sbjct: 186 PES-TIEIRPEDLKIETFRAGGAGGQHVNKVESAVRITHIPTGIVVQCQNERSQHANKEM 244

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A  +L+A+L ELE +KR E     +    EI WG QIRSYV  PY +VKD RT +E  + 
Sbjct: 245 ALRVLKARLEELEEKKRREKIASLKGEVQEISWGNQIRSYVFHPYTLVKDHRTGLEIGNV 304

Query: 336 SDVLDGDLDDFMKATL 351
             V+DG++D F++A L
Sbjct: 305 QAVIDGEIDPFIEAYL 320


>gi|258513428|ref|YP_003189650.1| peptide chain release factor 1 [Desulfotomaculum acetoxidans DSM
           771]
 gi|257777133|gb|ACV61027.1| peptide chain release factor 1 [Desulfotomaculum acetoxidans DSM
           771]
          Length = 355

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 116/351 (33%), Positives = 190/351 (54%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           +F+      +R   L     DP +  +    +  ++    + + ++  +E +     + D
Sbjct: 1   MFERLQKIEERYEELGDLMGDPEVMADHSRWQQYVKAHADMQDIVNVYREYRQLDQEVSD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGG 127
              LL+  L+ED   +++   + L   K E+  K    L      D  +  LEV AG GG
Sbjct: 61  ARELLKDKLDEDFREMVELELEELSEKKEELVQKLKLLLLPKDPNDDKNVILEVRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AEK+ ++TE L+ +  +  G K    +I+G  AY  LK E GV
Sbjct: 121 EEAALFAGDLFRMYTRYAEKQGWRTEVLDANYTDIGGFKEVVCMIEGKGAYSRLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EI+I+ +D RID + ++G GGQ VNTT 
Sbjct: 181 HRVQRVPSTESGGRIHTSAATVAVLP-EAEEVEIDINPNDLRIDVFCSTGPGGQSVNTTQ 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+P+G+VV CQ E+SQHKNK +A  +LRA+L +L   + E+ + +  + K+ +G
Sbjct: 240 SAVRITHLPSGLVVSCQDEKSQHKNKDKAMRVLRARLKDLA--ESEQRSELASTRKSMVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   + D R  +       VL G++D+ ++A +   +
Sbjct: 298 SGDRSERIRTYNF-PQNRITDHRIGLTTHRMPAVLMGEMDEIIEALITTDQ 347


>gi|283471335|emb|CAQ50546.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           ST398]
          Length = 358

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 112/347 (32%), Positives = 182/347 (52%), Gaps = 12/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R   LN    DP +  +  + +   +E+  L   +   +  + +  +   + E+
Sbjct: 5   LDIVEERYEQLNELLSDPDVVNDSDKLRKYSKEQADLQKTVDVYRNYKAKKEELADIEEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E DD   ++   +    IK E+   +       +     D  D  +E+ A AGG E+ 
Sbjct: 65  LSETDDKEEVEMLKEESSGIKAELPNLEEELKILLIPKDPNDDKDVIVEIRAAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L+RMY+++AE + FKTE +E  + +  G K  +  + G  AY  LK E G HR+ 
Sbjct: 125 IFAGDLMRMYSKYAESQGFKTEIVEASESDHGGYKEISFSVSGNGAYSKLKFENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EIEI   D +IDTYR+SGAGGQHVNTTDSAVR
Sbjct: 185 RVPETESGGRIHTSTATVAVLP-EVEDVEIEIRNEDLKIDTYRSSGAGGQHVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTGV+     E+SQ +N+ +A  +L+A+LY++++Q  EE        K+ +G G  
Sbjct: 244 ITHLPTGVIATSS-EKSQIQNREKAMKVLKARLYDMKVQ--EEQQKYASQRKSAVGTGDR 300

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +++G L++ + A    ++
Sbjct: 301 SERIRTYNY-PQSRVTDHRIGLTLQKLGQIMEGHLEEIIDALTLSEQ 346


>gi|227890652|ref|ZP_04008457.1| peptide chain release factor 1 [Lactobacillus salivarius ATCC
           11741]
 gi|227867590|gb|EEJ75011.1| peptide chain release factor 1 [Lactobacillus salivarius ATCC
           11741]
          Length = 360

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 106/352 (30%), Positives = 182/352 (51%), Gaps = 12/352 (3%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLC 67
            LFD       R   L     DP +  +      L +E   L   +    + +    ++ 
Sbjct: 3   KLFDRLQMLEDRYEELGELLSDPDVISDTKRFTKLSKEMADLRETVEKYNKYKEVTQQIS 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
           D+  +L   L+++  S+++E   N +  K    E  +   L     D  +  +E+   AG
Sbjct: 63  DDEEMLSDGLDDEMASLVKEELSNAKDEKVKLEEEIKILLLPKDPNDDKNIIMEIRGAAG 122

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L  MY+++AE++ +  E ++ +  E  G K   L+I G + +  LK E G
Sbjct: 123 GDEASLFAADLFSMYSKYAERQGWSIEVIDKNVTEVGGFKEIALIINGNSVWSKLKYESG 182

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ RI   +S  R HTS +++ V P  ++ +EIE+   D R+D YR+SGAGGQH+N T
Sbjct: 183 AHRVQRIPVTESAGRVHTSTATVVVMP-EEEDVEIELDPKDIRVDVYRSSGAGGQHINKT 241

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+TH+PTG+VV  Q +RSQ +N+ +A  +L+A++Y+   Q+  E +    + K+ +
Sbjct: 242 SSAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDYYAQQ--EQSEYDANRKSAV 299

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       +++G+L+D + A +  ++
Sbjct: 300 GTGDRSERIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELEDVIDALILFEQ 350


>gi|161503112|ref|YP_001570224.1| peptide chain release factor 1 [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|189039988|sp|A9MPA1|RF1_SALAR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|160864459|gb|ABX21082.1| hypothetical protein SARI_01177 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 360

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 113/337 (33%), Positives = 177/337 (52%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE      ++ +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E + + +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGEGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A+++  E  KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      + ++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIE 342


>gi|189345639|ref|YP_001942168.1| peptide chain release factor 1 [Chlorobium limicola DSM 245]
 gi|238692166|sp|B3EE55|RF1_CHLL2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189339786|gb|ACD89189.1| peptide chain release factor 1 [Chlorobium limicola DSM 245]
          Length = 357

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 103/347 (29%), Positives = 175/347 (50%), Gaps = 13/347 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   +  ++   L  +  DP    +    + L +E   L   +               
Sbjct: 1   MFDKLQSIKEKHLDLEQQLADPSAASDQNRFRKLNKEYSDLKEIVHAFDRYSLARKQLEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             EL   E D  + +     ++ ++ ++   +       L   EADS +  +E+ AG GG
Sbjct: 61  SRELLGSEKDPQMRELVQMEIEDLQEKLPELEQQLKVLLLPKDEADSRNVIMEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNAYGWLKGEQG 186
            E+  +A  LLRMY R+AE++ +K   L+  +     G +  TL + G + +  +K E G
Sbjct: 121 DEAALFAADLLRMYQRYAERQGWKCVLLDYTESSVPGGFREVTLEVSGHDVFATMKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +S+ V P   + +++EI   D R DTYR+ G GGQ+VN  
Sbjct: 181 VHRVQRVPDTETQGRIHTSAASVAVLP-EAEEVDVEIRRDDLRFDTYRSGGKGGQNVNKV 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++AVRITH+PTG+V  CQ+ERSQ +NK +A  MLR KLY+++L ++++        ++ +
Sbjct: 240 ETAVRITHLPTGIVAACQEERSQLQNKERAMTMLRTKLYDIQLAEQQQQRADL--RRSMV 297

Query: 307 GWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             G +   IR+Y   P   V D R      +   ++ G++ D ++A 
Sbjct: 298 STGDRSAKIRTYNY-PQSRVTDHRIGFTSHALPQIMQGEIGDVIEAL 343


>gi|254238595|ref|ZP_04931918.1| peptide chain release factor 1 [Pseudomonas aeruginosa C3719]
 gi|126170526|gb|EAZ56037.1| peptide chain release factor 1 [Pseudomonas aeruginosa C3719]
          Length = 360

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 115/342 (33%), Positives = 173/342 (50%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  I   ++ +    D      L
Sbjct: 9   LDVLSDRYEELTALLGDAEVISDQTRFRAYSREYAEVEPVILAFRDYRKVQADLEGAQAL 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +      R+    +  Q   L     DS + +LE+ AG  G E+  
Sbjct: 69  LKDSDPELRDLAEEEVAEARGRLAALGDSLQRMLLPKDPNDSRNVFLEIRAGTCGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AE++ ++ E L  ++GE  G K     ++G N Y  LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAERQGWRVETLSENEGEHGGYKEVIARVEGDNVYAKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSAVRI
Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRSSGAGGQHVNKTDSAVRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIP+G+VV+CQ+ERSQHKN+A+A   L AKL + +         I  + K  +G G   
Sbjct: 249 THIPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQ--AAAQQAIASTRKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +IR+Y   P   V D R N+   S  +V++G ++  ++  L
Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYSLGEVMEGAVEQVIEPLL 347


>gi|27363990|ref|NP_759518.1| peptide chain release factor 2 [Vibrio vulnificus CMCP6]
 gi|37678852|ref|NP_933461.1| protein chain release factor B [Vibrio vulnificus YJ016]
 gi|320157369|ref|YP_004189748.1| peptide chain release factor 2 [Vibrio vulnificus MO6-24/O]
 gi|27360107|gb|AAO09045.1| peptide chain release factor 2 [Vibrio vulnificus CMCP6]
 gi|37197593|dbj|BAC93432.1| protein chain release factor B [Vibrio vulnificus YJ016]
 gi|319932681|gb|ADV87545.1| peptide chain release factor 2 [Vibrio vulnificus MO6-24/O]
          Length = 289

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 160/287 (55%), Positives = 210/287 (73%), Gaps = 1/287 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + D   LLELA+E +D     E    L+ ++ ++   +F  + SG  DS+D Y+++ AG+
Sbjct: 1   MDDVEGLLELAIEAEDQETFDEIGPELEALEEKLAGLEFRRMFSGAHDSSDCYIDLQAGS 60

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDW +M+LRMY RWAE + FKTE +E+ +G+ AG+KS T+ I G  AYGWL+ E 
Sbjct: 61  GGTEAQDWTSMMLRMYLRWAEAKGFKTEVIEVSEGDVAGLKSVTVRIIGDYAYGWLRTET 120

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR SP+DS  RRHTSF+S +VYP +D++I+I+I+ +D RID YRASGAGGQHVNT
Sbjct: 121 GVHRLVRKSPFDSGGRRHTSFASAFVYPEIDENIDIDINPADLRIDVYRASGAGGQHVNT 180

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+       E +K++
Sbjct: 181 TESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSD 240

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 241 IGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKFIEASLK 286


>gi|206895563|ref|YP_002247293.1| peptide chain release factor 2 [Coprothermobacter proteolyticus DSM
           5265]
 gi|206738180|gb|ACI17258.1| peptide chain release factor 2 [Coprothermobacter proteolyticus DSM
           5265]
          Length = 370

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 134/336 (39%), Positives = 206/336 (61%), Gaps = 1/336 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+    LS +    E P +W +  +A  + R+ Q L+  I  +++I++ L D    LEL
Sbjct: 26  LDDKKAELSDVRKVYEKPDIWSDPDKAVAVARKVQRLEEEIERVEQIENLLKDLDAALEL 85

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
             E  D  + +     L+ ++  +E  +  +L +   D+NDA L +HAGAGG ++ DW  
Sbjct: 86  LQEGYDEELFEHALATLKELQQRIELFRLVTLFTEPYDTNDAILMLHAGAGGVDAMDWTQ 145

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
           ML+RMY RWAE+  F+TE ++I  GEEAG+KS T+ ++G  AYG+L+ E+GVHRLVR+SP
Sbjct: 146 MLMRMYLRWAERMGFETEIVDISRGEEAGVKSCTVFVRGSYAYGYLRAEKGVHRLVRLSP 205

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           +D++ RRHTSF+ +       + +E+EI+  D  ++T+R+ GAGGQH N T+S VR+ H 
Sbjct: 206 FDADHRRHTSFA-LVDVVPDVEDVEVEINPDDIEVETFRSGGAGGQHQNKTESGVRLIHK 264

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315
           PTG+ V   +ERSQ +N+ +A  +LRA++++   ++R++             WG QIRSY
Sbjct: 265 PTGITVTVTEERSQLQNRERAMRILRARVHQYHEEERKKSLEEIRGDVKSASWGNQIRSY 324

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           V  PY MVKD RT   +    +V+DGD+ DFM   L
Sbjct: 325 VFHPYNMVKDHRTGYSRGDIDNVMDGDITDFMVKFL 360


>gi|319936941|ref|ZP_08011351.1| peptide chain release factor 1 [Coprobacillus sp. 29_1]
 gi|319807877|gb|EFW04456.1| peptide chain release factor 1 [Coprobacillus sp. 29_1]
          Length = 358

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 112/346 (32%), Positives = 177/346 (51%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   LN    DP +  ++ +     +E+  L+ A    +E +  L       EL
Sbjct: 8   LETIARRYEELNEILMDPSIASDIHKMTEASKEQASLETAYQLYQEYKKVLSGIEEAKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E D         +  +  + +   ++    E +     D+ +  +EV   AGG E   
Sbjct: 68  MKENDPEIKEMAELELSELEEKKPHLEEKLHLELIPKDPNDNKNVIVEVRGAAGGDEGNI 127

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY ++AE + +K E +E  + E  G    + ++KG   Y  LK E G HR+ R
Sbjct: 128 FAGDLYRMYVKYAESQGWKVEVMETQESEAGGFSLVSFMVKGEGVYSKLKFESGSHRVQR 187

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P   + +++EI+  D RIDTYRASGAGGQH+N TDSAVRI
Sbjct: 188 VPKTETQGRVHTSTATVLVMP-EAEEVDVEINPGDLRIDTYRASGAGGQHINKTDSAVRI 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+V   Q  RSQH NK +A   LRA++Y  E+ +RE+   +G   +++IG G   
Sbjct: 247 THLPTGIVASSQDGRSQHDNKDKAMRALRARVY--EMVQREQEEALGSERRSKIGSGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +++G LDD + A +   +
Sbjct: 305 EKIRTYNY-PQNRVTDHRIGLTIQQLDRIMEGKLDDVIDALINEDQ 349


>gi|315283708|ref|ZP_07871812.1| peptide chain release factor 1 [Listeria marthii FSL S4-120]
 gi|313612648|gb|EFR86686.1| peptide chain release factor 1 [Listeria marthii FSL S4-120]
          Length = 358

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 106/347 (30%), Positives = 178/347 (51%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
                 R   LN    DP +  +    + L +E+  +   +   +E ++   ++ +   L
Sbjct: 5   LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVEAYREYKNVNEQINETKEL 64

Query: 73  LELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L   L+++   + +E    LQ+ K    E  +   +     D  +  LE+   AGG E+ 
Sbjct: 65  LGEKLDDEMREMAKEEFAELQKEKTELEERLKLLLVPKDPNDDKNVILEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AE R +K E ++ +     G K    ++ G +A+  +K E G HR+ 
Sbjct: 125 LFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P   + +EIE+ + D R DT+ ++GAGGQ VNTT SAVR
Sbjct: 185 RVPETESGGRIHTSTATVAILP-EAEEVEIELHDKDIRTDTFASTGAGGQSVNTTMSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+    +RE       + K+ +G G  
Sbjct: 244 LTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKF--EREAREEYDANRKSAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +++G LD+ + A +   +
Sbjct: 302 SERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQ 347


>gi|126653461|ref|ZP_01725557.1| peptide chain release factor 1 [Bacillus sp. B14905]
 gi|126589817|gb|EAZ83950.1| peptide chain release factor 1 [Bacillus sp. B14905]
          Length = 358

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 103/351 (29%), Positives = 174/351 (49%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD       R   L     DP +  +  + +   +E+  +   +   +E ++     + 
Sbjct: 1   MFDRLQAVEDRYERLTELLSDPDIVNDSKKLREYSKEQSDIQETVDSYREYKNVKEQLVD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             E+   E D  + +   +    +K + E  +       +     D+ +  +E+   AGG
Sbjct: 61  TREMLDSEKDPDMHEMVKEEFNLLKAQQEELEERLRILLIPKDPNDNKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +K + +E       G K    +I G  AY   K E G 
Sbjct: 121 DEANIFAGDLFRMYSRYAETQGWKIDIMEATPNPMGGYKEVIFMINGQGAYSKFKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P   + +++EI E D R+DT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRVPATESQGRIHTSTATVACLP-EVEEVDVEIHEKDIRVDTFASSGAGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV  Q ERSQ KN+ +A  +LRA++ ++ +Q  E    I  + K+ +G
Sbjct: 240 SAVRMTHLPTGVVVSMQDERSQIKNREKAMKILRARVADMYMQ--EAQKEIDATRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G LD+ +   +  ++
Sbjct: 298 SGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIVEGRLDEIIDTLILEEQ 347


>gi|170017816|ref|YP_001728735.1| peptide chain release factor 1 [Leuconostoc citreum KM20]
 gi|238692786|sp|B1MVN7|RF1_LEUCK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169804673|gb|ACA83291.1| Peptide chain release factor 1 [Leuconostoc citreum KM20]
          Length = 357

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 96/344 (27%), Positives = 165/344 (47%), Gaps = 8/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               V R   LN +  DP +  +  +   L +E   +   +      Q  L D     +L
Sbjct: 8   LQTVVDRYDELNEQLADPEIAGDGQKYMALSKEAGEMRETVETYLHYQQVLQDIADAEDL 67

Query: 76  ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +      ++ +      +      +   L     D  +  +E+   AGG ES  +A
Sbjct: 68  LDDAEMAPLAKEDLNTLKPEKEALESQLKILMLPKDPNDDKNIIMEIRGAAGGDESSLFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LL MY R+AEK+++    ++    E  G K   ++I G N Y  LK E G HR+ R+ 
Sbjct: 128 ADLLDMYRRYAEKQRWTLSIIDETLTEVGGYKEVAVMITGDNVYSKLKFESGAHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P   + I+ E++ESD   + +R+ GAGGQ+VN   +AVR+ H
Sbjct: 188 ATETQGRVHTSTATVGVMPEFQE-IDFELAESDLEEEFFRSGGAGGQNVNKVSTAVRLVH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            PTG++V+ Q+ER+Q KN+ +A  +L +++Y+   Q+ E      E  K+ +G G    +
Sbjct: 247 KPTGIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNEAE--YAEKRKSAVGTGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R  +       V++G+L + + A +   +
Sbjct: 305 IRTYNY-PQNRVTDHRIGLTLNKLDRVMNGELGEVIDALVIADQ 347


>gi|290969299|ref|ZP_06560824.1| peptide chain release factor 1 [Megasphaera genomosp. type_1 str.
           28L]
 gi|290780805|gb|EFD93408.1| peptide chain release factor 1 [Megasphaera genomosp. type_1 str.
           28L]
          Length = 360

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 110/349 (31%), Positives = 186/349 (53%), Gaps = 13/349 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC----DNLI 71
                 + + L  +  DP +     E + L +E   L   I   ++ Q+       D  +
Sbjct: 6   VQAVENKYNDLEQRISDPAVIARQKEWQKLTKEHASLAPIIEAYRKYQEVCKTIRGDREL 65

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTES 130
           L + + + +  ++ +E    L + +  +E K     L     D  +  +E+  GAGG E+
Sbjct: 66  LDDPSTDTELTAMAKEEIAELTKEQAALEEKLHILMLPKDPHDDKNVIMEIRGGAGGDEA 125

Query: 131 QDWANMLLRMYTRWAEKR-KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
             +A  L RMY ++ EK+  +K E +  ++ E  G K     ++G   YG LK E GVHR
Sbjct: 126 ALFAGDLFRMYMKYIEKQPGWKAELISANEPELGGYKEVVFSVEGAGVYGKLKYESGVHR 185

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R HTS +++ V P   D +EI++   D R+D +RASGAGGQH+N T SA
Sbjct: 186 VQRVPVTEAGGRIHTSTATVAVLP-EADDVEIDLDMKDVRVDYFRASGAGGQHINKTSSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+TH+P+G+VV+CQ ERSQ +N+ +A  +L+A+L  L+  ++     + E+ ++++G G
Sbjct: 245 VRMTHMPSGIVVECQDERSQLENRTKALRVLKARL--LDQAQQAAAQEVTEARRSQVGTG 302

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       VL+GDLD+F++A    ++
Sbjct: 303 DRSERIRTYNY-PQGRVTDHRINVTLYKLDAVLNGDLDEFIQALAEARR 350


>gi|257066246|ref|YP_003152502.1| peptide chain release factor 1 [Anaerococcus prevotii DSM 20548]
 gi|256798126|gb|ACV28781.1| peptide chain release factor 1 [Anaerococcus prevotii DSM 20548]
          Length = 358

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 120/351 (34%), Positives = 189/351 (53%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  ++  +    L  K  DP +  ++ +   + RE   L   +    EI+D       
Sbjct: 1   MFENIEHIKENYLDLEKKMIDPDVLADISKLTKITREYNSLKPIVEKYDEIKDSESTIAE 60

Query: 72  LLELALEEDDCSILQETSDNLQRI----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             EL  E DD  +++   D ++      +   E  +   +     DS D  +E+  GAGG
Sbjct: 61  NKELIGEADDQDMVEMLKDEIKENEKLLEKYKEEMKILLIPKDPNDSRDVIVEIRPGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY  +A+K  +KTE +E+      GIK AT +I+G  AY   K E GV
Sbjct: 121 DEAGLFAGDLYRMYHMYADKEGYKTEDVEVSSQGVGGIKEATFMIRGEGAYSRFKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   D +++E+  +D R D +R+SG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EVDEVDVELDPNDIRTDVFRSSGNGGQSVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+VV  Q E+SQ KNK +A  +L A++YELE +KR +   I ++ K+++G
Sbjct: 240 SAVRLTHIPTGIVVSMQDEKSQIKNKEKAMKILLARIYELEEEKRNKE--IADNRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   + D R N       D L+G++ + + + +A  +
Sbjct: 298 TGDRSERIRTYNF-PQGRITDHRINKTIYQLDDFLNGNIGEMIDSLIAEDQ 347


>gi|327441448|dbj|BAK17813.1| protein chain release factor A [Solibacillus silvestris StLB046]
          Length = 358

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 109/351 (31%), Positives = 170/351 (48%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD       R   LN    DP +  +  + +   +E+  +   +   +  +        
Sbjct: 1   MFDRLQAVEDRYERLNELLSDPDIVSDSNKLREYSKEQSDIQEMVDVYRVYKSVKEQLAD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             EL   E D  +L+   +    +  +V   +       +     DS +  +E+   AGG
Sbjct: 61  TRELMEIEKDAEMLEMMKEEFNDLNKQVPELEERLRILLIPKDPNDSKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE + +K + +E       G K   L+I G  AY   K E G 
Sbjct: 121 DEANIFAGDLFRMYTRYAETQGWKVDVMEATPNPAGGYKEVILMINGQGAYSKFKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P      ++EI E D R+DT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRVPATESQGRIHTSTATVACLP-EVHVEDVEIHEKDIRVDTFASSGAGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV  Q ERSQ KN+ +A  +L A++ +   Q  E  A I  + KT +G
Sbjct: 240 SAVRMTHLPTGVVVSMQDERSQIKNREKAMKILVARVADKHRQ--EAQAEIDATRKTAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G LD+ + A +  ++
Sbjct: 298 TGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIVEGKLDEIIDALILDEQ 347


>gi|157145532|ref|YP_001452851.1| peptide chain release factor 1 [Citrobacter koseri ATCC BAA-895]
 gi|166223546|sp|A8AG02|RF1_CITK8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157082737|gb|ABV12415.1| hypothetical protein CKO_01275 [Citrobacter koseri ATCC BAA-895]
          Length = 360

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 112/337 (33%), Positives = 174/337 (51%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGTIADQERFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68

Query: 76  ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+     +   +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQDELREAKEKGEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A+++  E  KR++      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQ--AEASTRRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   V D R N+      + ++G LD  ++
Sbjct: 307 NRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLDMLIE 342


>gi|228470795|ref|ZP_04055643.1| peptide chain release factor 1 [Porphyromonas uenonis 60-3]
 gi|228307468|gb|EEK16473.1| peptide chain release factor 1 [Porphyromonas uenonis 60-3]
          Length = 368

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 98/355 (27%), Positives = 161/355 (45%), Gaps = 20/355 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLIL 72
            +  V R   L T   DP +  +      L +E  HL   +      K++  +  +    
Sbjct: 8   IEALVARHEELETLITDPSVIADGRRFATLSKEYTHLGEILKAGAQYKQLLTQQEEAEST 67

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGTES 130
           L+ +  +++   +        + +     ++ + L   +   D  +A LE+ AG GG E+
Sbjct: 68  LQDSDSDEELKAMARELLAEAKEESPKMEEEIKLLLLPNDPEDDKNAILELRAGTGGDEA 127

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY+R+ E + +        +G   G K   L + G   YG LK E GVHR+
Sbjct: 128 ALFAGDLFRMYSRYCETKGWNVTVSSYTEGGTGGYKEIVLNVTGTGVYGTLKYESGVHRV 187

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P  D      I+E + + DT+R+SGAGGQ+VN  +S V
Sbjct: 188 QRVPQTETQGRIHTSAATVAVLPEADKFEVN-INEGEIKWDTFRSSGAGGQNVNKVESGV 246

Query: 251 RITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           R+ +            + ++C + R Q KNK +A + LR  +Y+ E QK   I  I    
Sbjct: 247 RLHYPWRNPNTGVVEDITIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDEIASRR 304

Query: 303 KTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           KT +  G +   IR+Y   P   V D R  +   +   VL GDL   + A +  +
Sbjct: 305 KTMVSTGDRSAKIRTYNF-PQGRVTDHRIGLTVHNLPGVLGGDLQPIIDALIVAE 358


>gi|218886539|ref|YP_002435860.1| peptide chain release factor 1 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|226739101|sp|B8DLL6|RF1_DESVM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|63852197|dbj|BAD98449.1| peptide release factor 1 [Desulfovibrio vulgaris]
 gi|218757493|gb|ACL08392.1| peptide chain release factor 1 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 357

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 114/345 (33%), Positives = 175/345 (50%), Gaps = 11/345 (3%)

Query: 13  LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCD 68
           +F   +N  +R   L  +     ++ +    + L +    L   +      KE++  L D
Sbjct: 1   MFAKLENLERRFEDLEQQLASSEVFNDQDRYRKLTKAHADLKEVVDVFRRYKELRQNLAD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           N  LL+ A  E      +E       I    +  Q   L     D  +  +E+ AG GG 
Sbjct: 61  NKELLDDADPEIRSMAHEEAKSLESAIPEIEQELQLLLLPKDPLDEKNTIVEIRAGTGGE 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AE R +K E L  ++ +  G K    LI G   Y  LK E G H
Sbjct: 121 EAALFAADLFRMYSRYAEIRGWKVEILSANESDTGGYKEVIALIVGDKVYSRLKFESGTH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS +++ + P   + +++EI   D RID +RASGAGGQHVN T+S
Sbjct: 181 RVQRVPATESQGRIHTSAATVAILP-EAEEVDVEIRPDDIRIDVFRASGAGGQHVNKTES 239

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+P+G+VV CQ E+SQHKNKA+A  +L ++L + E  ++     +    ++++G 
Sbjct: 240 AVRITHMPSGIVVSCQDEKSQHKNKAKAMKVLASRLLQAEQDRQ--HNEMAADRRSQVGS 297

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G    +IR+Y   P   V D R N+   S   V++G+      A 
Sbjct: 298 GDRSERIRTYNF-PQGRVTDHRINLTLYSLDRVMEGEAQALFDAL 341


>gi|302327519|gb|ADL26720.1| peptide chain release factor 1 [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 358

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 105/351 (29%), Positives = 177/351 (50%), Gaps = 11/351 (3%)

Query: 10  LGGLFDW-DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           +  + D     +++   L ++  +P +  +      + ++ + ++ A+   KE    + D
Sbjct: 1   MRTMKDKAKKLIEKYEELESELGNPDVLGDQARYNKIHKQYKGIEKAVLKAKEYLQMMDD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKL---EVEYKQFESLLSGEADSNDAYLEVHAGA 125
                    + D   +    ++  +  K      +  Q   +     D  +A LE+  G 
Sbjct: 61  LDEYKAALGDSDPEMVAMAKAEISEIEKKLPEVTDELQILMVPKDPWDYRNATLEIRGGT 120

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG ES  +A  L RMY  + +K  +K    ++ +G   G K   + I+G + YG LK E 
Sbjct: 121 GGDESALFAGDLFRMYRGYCDKMGWKMTIQDLSEGTVGGYKEIRVFIEGDSVYGTLKFES 180

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   ++  R HTS +++ + P   + +++EI E+D  +DTYR+SGAGGQ++N 
Sbjct: 181 GVHRVQRVPETETQGRVHTSAATVAILP-EAEEVDVEIREADIHMDTYRSSGAGGQYINK 239

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+THIPTGVVV CQ ERSQ +N+  A  MLR+K+ +  + K+E+      + K  
Sbjct: 240 TDSAVRLTHIPTGVVVSCQTERSQLQNRLHAMEMLRSKILDAVIAKKEKE--EAANRKAL 297

Query: 306 IGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +G G +   IR+Y   P   V D R  +   +   V+ GDLD+ +      
Sbjct: 298 VGTGDRSAKIRTYNY-PQNRVTDHRIGLTVYNLDKVVTGDLDEIINGLQMA 347


>gi|121603686|ref|YP_981015.1| peptide chain release factor 1 [Polaromonas naphthalenivorans CJ2]
 gi|166223585|sp|A1VKB6|RF1_POLNA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|120592655|gb|ABM36094.1| bacterial peptide chain release factor 1 (bRF-1) [Polaromonas
           naphthalenivorans CJ2]
          Length = 373

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 115/353 (32%), Positives = 174/353 (49%), Gaps = 17/353 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + RL  L+       +  ++   + L RE             +  R  D      +
Sbjct: 9   LDRQLLRLHELDALLSASDVVSDLDRFRALTREHAEASVVAEQYNRLTAREADLASAESM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130
             E  +   + E ++           +     Q   +     D   A++E+ AG GG ES
Sbjct: 69  LAEAKNDPDMAEMAEEEINAAKTDIAQLDEALQLMLIPKDPDDRRAAFIEIRAGTGGDES 128

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA------YGWLKGE 184
             +A  L R+YTR+AE+++++ E +     E  G K   L I GP        YG L+ E
Sbjct: 129 ALFAGDLFRLYTRFAERKRWQVEIISESPSELGGYKEVVLRIDGPTDAMGVGVYGKLRFE 188

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   ++  R HTS  ++ V P  D+++ I+I+ +D RIDTYRASGAGGQH+N
Sbjct: 189 SGGHRVQRVPATETQGRIHTSACTVAVLPEPDETVAIQINPADLRIDTYRASGAGGQHIN 248

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            TDSAVRITH+PTG+V +CQ+ RSQH NKAQA  +L A++   E ++  + A      K 
Sbjct: 249 KTDSAVRITHLPTGIVAECQEGRSQHGNKAQAMKVLTARI--HEKERSAQAAKDAAMRKG 306

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            IG G    +IR+Y   P   + D R N+       +++GDLDD + A    +
Sbjct: 307 LIGSGDRSDRIRTYNF-PQGRLTDHRINLTLYKLLTIMEGDLDDVVTALQVAR 358


>gi|115380059|ref|ZP_01467103.1| peptide chain release factor 2, programmed [Stigmatella aurantiaca
           DW4/3-1]
 gi|115362934|gb|EAU62125.1| peptide chain release factor 2, programmed [Stigmatella aurantiaca
           DW4/3-1]
          Length = 309

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 144/294 (48%), Positives = 200/294 (68%)

Query: 58  FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
              +    L D   L+ELA E +D +  QE    L  ++ ++   +   +LSGE D ++ 
Sbjct: 3   AFDKALRGLDDAQTLMELAREANDEASAQEAEGLLPTLEGDIAKLELARMLSGENDRSNC 62

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           +++++AGAGGT+S DWA ML+RMYTR+ E+R ++ E  ++  GEEAG K+ +L I+G  A
Sbjct: 63  FMDINAGAGGTDSMDWAAMLMRMYTRFCEERGWEVEISDMVAGEEAGFKNVSLHIRGEYA 122

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           YG+LK E GVHRLVRISP+D+N+RR T+F+S+ VYP VDDSI I+I E D  +   R  G
Sbjct: 123 YGYLKAEVGVHRLVRISPFDANARRQTAFASVDVYPEVDDSIRIDIPEKDYELKFIRGGG 182

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           AGGQ VN T S  ++ H+PT +++ CQ ERSQ  NK  A+ +LRA+LYELEL+KRE   +
Sbjct: 183 AGGQKVNKTSSTAQLRHLPTNILITCQTERSQSANKDMAFKILRARLYELELKKREAERD 242

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             E+ K +I +G QIRSYVL PY+MVKDLRT +E  +   VLDGDL+ F+ A L
Sbjct: 243 AAEAQKKDISFGSQIRSYVLAPYRMVKDLRTGVETGNVDAVLDGDLEQFVTAQL 296


>gi|116749148|ref|YP_845835.1| peptide chain release factor 1 [Syntrophobacter fumaroxidans MPOB]
 gi|166977370|sp|A0LIZ8|RF1_SYNFM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116698212|gb|ABK17400.1| bacterial peptide chain release factor 1 (bRF-1) [Syntrophobacter
           fumaroxidans MPOB]
          Length = 355

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 121/346 (34%), Positives = 184/346 (53%), Gaps = 12/346 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCD 68
           +FD  ++  Q+   L     +P L  N  E + + RE   +   +      K +  +L D
Sbjct: 1   MFDRLESVAQKFRKLEEDLSNPELLANQKEYQKIAREHAEIAPIVEAYGLYKGLHRQLLD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127
           N  LLE   + +   + ++    L+R   + E   +         D  +  LE+ AG GG
Sbjct: 61  NQQLLEQETDPEMRELFRQEIAELKRQIEDTENGLKLMLAPRDPNDDKNVILEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  + + L RMYTR+AE R++K E L+ H     G+K     + G  AY  LK E+GV
Sbjct: 121 EEAALFVSDLFRMYTRYAELRRWKVEILDSHQTGIGGLKEVIAAVNGQGAYSRLKFERGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  ++ V P   + +++ I  +D R+D +R+SG GGQ VNTTD
Sbjct: 181 HRVQRVPVTESQGRIHTSAVTVAVLP-EAEEVDVYIDPNDLRVDVFRSSGPGGQSVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIP+G+VV CQ E+SQHKNKA+A  +LRA+L  L+  + E+ A I    K+++G
Sbjct: 240 SAVRVTHIPSGLVVICQDEKSQHKNKAKALKVLRARL--LDQMQSEQEARIARDRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            G    +IR+Y   P   V D R N+       +L G LD+ +   
Sbjct: 298 TGDRSERIRTYNF-PQNRVSDHRINLTLYKLDIILGGALDEIIDPL 342


>gi|145298193|ref|YP_001141034.1| peptide chain release factor 1 [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|166223526|sp|A4SK64|RF1_AERS4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|142850965|gb|ABO89286.1| Protein chain release factor A [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 362

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 110/342 (32%), Positives = 182/342 (53%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     +P +  +    + L RE   L++ +   +  +    +      +
Sbjct: 9   LEGLIERHEEVQAMLGEPGVASDQDRYRALTREYAQLEDIVHAFQRFRQAEENLEATKLM 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D         +       ++ + +  Q   L     D N+ YLE+ AGAGG E+  
Sbjct: 69  LEEDDADLREMAQEELPLAKSTLEEQEQALQVMLLPRDPKDDNNCYLEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE++ ++   +  +DGE  G K     + G + YG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAERQGWRISIVSCNDGEHGGYKEVIAKVDGEHVYGRLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P V ++ +IEI+ +D +IDT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRVHTSACTVAVLPEVPEAEQIEINANDLKIDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ ERSQHKN+A+A ++L A+L   E ++         + +  +G G   
Sbjct: 249 THLPTGLVVECQDERSQHKNRAKAMSVLSARLQAAEDERHRAAEQ--STRRNLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +IR+Y   P   + + R N+      ++++GDLD  +   +
Sbjct: 307 ERIRTYNY-PQGRLSEHRINLTLYRLGEIMEGDLDCIISPMI 347


>gi|225849764|ref|YP_002729998.1| peptide chain release factor 1 [Persephonella marina EX-H1]
 gi|254790894|sp|C0QTI3|RF1_PERMH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|225646004|gb|ACO04190.1| peptide chain release factor 1 [Persephonella marina EX-H1]
          Length = 361

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 128/346 (36%), Positives = 187/346 (54%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N  ++L  L     DP + ++  + + + +E +  +      KE +  L D      L
Sbjct: 10  LENIDEKLKKLEAALSDPEVLKDQKKLQQVAKEHKETEKLSKLYKEYKKVLKDIEETKSL 69

Query: 76  ALEEDDCSILQETS---DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
               D+   L       +  QR +   +  Q E L     D  +  LE+  GAGG E+  
Sbjct: 70  LNNPDEEMRLLAEEELKNLNQRKEELEKEIQIELLPKDPNDEKNVILEIRQGAGGEEAAL 129

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY R+AE++ +K E L +H  +  GIK    LIKG  AY  LK E GVHR+ R
Sbjct: 130 FAGELFRMYQRYAERKGWKVEVLSMHPTDRGGIKEVIALIKGQGAYSRLKFESGVHRVQR 189

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S+ R HTS +++ V P   + ++IEI   + +I+T RASGAGGQHVNTTDSAVRI
Sbjct: 190 VPETESSGRIHTSTATVAVLP-EAEEVDIEIKPEELKIETMRASGAGGQHVNTTDSAVRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV CQ ERSQ +N+A+A  +LRA+L +     R E   I +  + ++G G   
Sbjct: 249 THIPTGIVVSCQDERSQLQNRAKAMQILRARLKDYYD--RLEREKIEKERRMQVGTGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N       D+LDGDLD+ +   +A ++
Sbjct: 307 EKIRTYNF-PQNRVTDHRINYTSHRLHDILDGDLDEIIDQLIAKEQ 351


>gi|161506411|ref|YP_001573523.1| hypothetical protein SARI_04609 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160867758|gb|ABX24381.1| hypothetical protein SARI_04609 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 293

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 171/290 (58%), Positives = 208/290 (71%), Gaps = 1/290 (0%)

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ A
Sbjct: 3   QGLDDVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQA 62

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTE+QDWA+MLLRMY RWAE R FKTE +E  +GE AGIKSAT+ I G  AYGWL+ 
Sbjct: 63  GSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLRT 122

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHV
Sbjct: 123 ETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHV 182

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K
Sbjct: 183 NRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTK 242

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           ++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 243 SDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|300692007|ref|YP_003753002.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia
           solanacearum PSI07]
 gi|299079067|emb|CBJ51729.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia
           solanacearum PSI07]
          Length = 300

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 158/298 (53%), Positives = 220/298 (73%), Gaps = 1/298 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  + ++ + L     L ELA EE D   ++    +   ++  VE  +F  + SG  D+ 
Sbjct: 2   VFALTKLDEDLNGGAELFELAREEGDDDTVEAVEADTAGMRAIVEDMEFRRMFSGPMDAA 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           + ++++ AGAGGTE+ DWA+MLLR Y ++ E++ FKTE LE  +G+ AGIKSA++ ++G 
Sbjct: 62  NCFIDIQAGAGGTEACDWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASIKVEGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+G+L+ E GVHRLVR SP+DS   RHTSFSSI+VYP VDDSIEIE++ +D R+DTYRA
Sbjct: 122 YAFGFLRTETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQH+N TDSAVRITHIP+G+VVQCQ +RSQH+N+A+A  ML+++LYE EL+KR+  
Sbjct: 182 SGAGGQHINKTDSAVRITHIPSGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAE 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           A+  E+SKT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 242 ADKLEASKTDVGWGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDTFIEASLKQ 298


>gi|28378950|ref|NP_785842.1| peptide chain release factor 1 [Lactobacillus plantarum WCFS1]
 gi|254557155|ref|YP_003063572.1| peptide chain release factor 1 [Lactobacillus plantarum JDM1]
 gi|300766721|ref|ZP_07076638.1| peptide chain release factor RF1 [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308181160|ref|YP_003925288.1| peptide chain release factor 1 [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|32171522|sp|Q88UT2|RF1_LACPL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|28271787|emb|CAD64693.1| peptide chain release factor 1 [Lactobacillus plantarum WCFS1]
 gi|254046082|gb|ACT62875.1| peptide chain release factor 1 [Lactobacillus plantarum JDM1]
 gi|300495821|gb|EFK30972.1| peptide chain release factor RF1 [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308046651|gb|ADN99194.1| peptide chain release factor 1 [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 360

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 104/352 (29%), Positives = 176/352 (50%), Gaps = 12/352 (3%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLC 67
             FD       R   L     DP +  +      L +E  ++   +      +    ++ 
Sbjct: 3   KFFDKLQAVADRYEELGELLSDPEVISDSQRFMKLSKEMGNIRETVEKYNHYKEVTSQIE 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAG 126
           +N  LL   L+++  +++++   NL   K +         L     D  +  +E+H  AG
Sbjct: 63  ENDELLHEKLDDEMNAMVKDDLKNLNAEKDQLEHEITLLMLPKDPNDDKNIIMEIHGAAG 122

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L  MY+++AE++ ++ E  + ++ E  G K   L+I G   Y  LK E G
Sbjct: 123 GDEASLFAADLFNMYSKYAERQGWQVEVADRNETEVGGFKEIVLIISGDKVYSKLKYESG 182

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P     ++I+I + D R D +R+SGAGGQH+N T
Sbjct: 183 AHRVQRVPVTESAGRVHTSTATVGVMP-EAQDVDIDIDQKDIRTDVFRSSGAGGQHINKT 241

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+TH+PTG+VV  Q +RSQ +N+A+A  +LRA++Y+    +  E        K+ +
Sbjct: 242 SSAVRMTHLPTGIVVSMQDQRSQQQNRAKAMEILRARVYDYYQSR--EQNEYDAERKSAV 299

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       V++G+LD+ + A +   +
Sbjct: 300 GTGDRSERIRTYNF-PQNRVTDHRIGLTLNKLDRVMNGELDEVIDALVLADQ 350


>gi|118594305|ref|ZP_01551652.1| peptide chain release factor 1 [Methylophilales bacterium HTCC2181]
 gi|118440083|gb|EAV46710.1| peptide chain release factor 1 [Methylophilales bacterium HTCC2181]
          Length = 359

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 112/344 (32%), Positives = 182/344 (52%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    RL  LN +       +++   K + +E   +   +   +E      D     E+
Sbjct: 9   LNALQNRLEELNDELSSEEATKDMDRYKKISKEHSDILPVVDIYQEFTRHTKDMNDAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +  S  Q+  D  +   + +E +    L      D  + +LE+ AGAGG ES  +A
Sbjct: 69  LSDPEMKSFAQDEIDANKAKIIMLEEQLQTLLLPKDPNDEKNIFLEIRAGAGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             + RMY+R+AE+ +++ E +  ++ E  G K     + G  AY  LK E G HR+ R+ 
Sbjct: 129 GDIFRMYSRYAERMRWQLEVISSNESEVGGFKEIIAKVIGQGAYSKLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V    D+  +++I+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 DTETQGRIHTSACTVAVLAEADEISDVDINPADIRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            PTG+VV+CQ +RSQH+NKAQA ++L A++ + ++   ++ + I    K+ IG G    +
Sbjct: 249 APTGIVVECQDDRSQHRNKAQAMSILAARIKDAQI--NDQQSKIATERKSLIGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       V+DGDL + +    +  +
Sbjct: 307 IRTYNF-PQGRITDHRINLTLYKIDFVMDGDLTELIDNLTSEHQ 349


>gi|317495271|ref|ZP_07953641.1| peptide chain release 1 [Gemella moribillum M424]
 gi|316914693|gb|EFV36169.1| peptide chain release 1 [Gemella moribillum M424]
          Length = 362

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 121/356 (33%), Positives = 194/356 (54%), Gaps = 14/356 (3%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ--- 63
           +  LG     +   +R   LN    DP +  +  +     +E++ ++  ++  +E +   
Sbjct: 1   MEILGQ---LEVVEERYEKLNELLSDPDVVSDTKKLMEYSKEQRSIEKTVAVFREYKNIV 57

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVH 122
            ++ D   LLE+  +++   ++QE    L+       E  +   L     D  +  +EV 
Sbjct: 58  QQIADTKELLEIEEDKEMKEMMQEEIKELEPSLAPMEEELKILLLPKDPNDGKNVVVEVR 117

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
             AGG E+Q +A  LLRMYTR+AE + +K + LE  +    GIK A  +I G + Y  +K
Sbjct: 118 GAAGGDEAQLFAGDLLRMYTRFAESQGWKVDVLERSETGIGGIKEAIFIISGEDVYSKMK 177

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G HR+ R+   +S+ R HTS +++ V P   + IEI+I+E+D R+DT+ +SGAGGQ 
Sbjct: 178 FESGAHRVQRVPTTESSGRIHTSTATVVVLP-EAEEIEIDINENDIRVDTFASSGAGGQS 236

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTT SAVR+THIPTGVVV  Q ERSQ KNK +A  +LRA++Y+    ++EE A      
Sbjct: 237 VNTTMSAVRLTHIPTGVVVSMQDERSQIKNKEKAMKVLRARVYDKY--QQEEQAKFDAER 294

Query: 303 KTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K+++G G    +IR+Y   P   V D R  +       +++G LD+ ++A    ++
Sbjct: 295 KSKVGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEVLEALRIAEQ 349


>gi|261416348|ref|YP_003250031.1| peptide chain release factor 1 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372804|gb|ACX75549.1| peptide chain release factor 1 [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 355

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 104/343 (30%), Positives = 174/343 (50%), Gaps = 10/343 (2%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +++   L ++  +P +  +      + ++ + ++ A+   KE    + D        
Sbjct: 6   KKLIEKYEELESELGNPDVLGDQARYNKIHKQYKGIEKAVLKAKEYLQMMDDLDEYKAAL 65

Query: 77  LEEDDCSILQETSDNLQRIKL---EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
            + D   +    ++  +  K      +  Q   +     D  +A LE+  G GG ES  +
Sbjct: 66  GDSDPEMVAMAKAEISEIEKKLPEVTDELQILMVPKDPWDYRNATLEIRGGTGGDESALF 125

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMY  + +K  +K    ++ +G   G K   + I+G + YG LK E GVHR+ R+
Sbjct: 126 AGDLFRMYRGYCDKMGWKMTIQDLSEGTVGGYKEIRVFIEGDSVYGTLKFESGVHRVQRV 185

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ + P   + +++EI E+D  +DTYR+SGAGGQ++N TDSAVR+T
Sbjct: 186 PETETQGRVHTSAATVAILP-EAEEVDVEIREADIHMDTYRSSGAGGQYINKTDSAVRLT 244

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ-- 311
           HIPTGVVV CQ ERSQ +N+  A  MLR+K+ +  + K+E+      + K  +G G +  
Sbjct: 245 HIPTGVVVSCQTERSQLQNRLHAMEMLRSKILDAVIAKKEKE--EAANRKALVGTGDRSA 302

Query: 312 -IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            IR+Y   P   V D R  +   +   V+ GDLD+ +      
Sbjct: 303 KIRTYNY-PQNRVTDHRIGLTVYNLDKVVTGDLDEIINGLQMA 344


>gi|303326242|ref|ZP_07356685.1| peptide chain release factor 1 [Desulfovibrio sp. 3_1_syn3]
 gi|302864158|gb|EFL87089.1| peptide chain release factor 1 [Desulfovibrio sp. 3_1_syn3]
          Length = 356

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 107/341 (31%), Positives = 165/341 (48%), Gaps = 10/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLIL 72
            +   ++   L      P ++ +    + L +    L   +   +    +Q  + +N  L
Sbjct: 5   LEGLEKKYMELEEALAQPDVFNDQEHYRKLTKAHADLREIVDLFRRHRALQQEMAENKQL 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L     +      +E       +    +  +   L +   D  +  LE+ AG GG E+  
Sbjct: 65  LHDEDPDIRDMAHEEIRRAESELPRIEQALKVALLPTDPLDEKNTILEIRAGTGGEEAAL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMYTR+AE + +K E +     E  G K    LI G   Y  LK E G HR+ R
Sbjct: 125 FAADLFRMYTRYAELQGWKVEIMSESPSESGGYKEIICLIAGDRVYSRLKFEAGTHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P   + +++EI   D RID YRASGAGGQHVN T+SAVRI
Sbjct: 185 VPATETQGRIHTSAATVAVMP-EAEEVDVEIRPEDLRIDIYRASGAGGQHVNKTESAVRI 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PT  VV CQ ERSQHKNKA+A  +L +++   E +++     +    K ++G G   
Sbjct: 244 THLPTNTVVTCQDERSQHKNKARAMKVLASRILAAERERQNSE--LSADRKAQVGSGDRS 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            +IR+Y   P     D R N+   S   +++G+L     A 
Sbjct: 302 ERIRTYNF-PQGRCTDHRINLTLYSLDRIMEGELTPLFDAL 341


>gi|332687009|ref|YP_004456783.1| peptide chain release factor 1 [Melissococcus plutonius ATCC 35311]
 gi|332371018|dbj|BAK21974.1| peptide chain release factor 1 [Melissococcus plutonius ATCC 35311]
          Length = 358

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 104/347 (29%), Positives = 169/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL---CDNLIL 72
                 R   L     DP +  +      L +E  +L   +   +  +  +    D   L
Sbjct: 5   LQAIEDRYEELGELLSDPEIISDTNRFLKLSKEEANLRETVEVYRRYKQVIQGIKDTEEL 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L  +LE +   + +E    L++ K  +  + +   L     D  +  +E+   AGG E+ 
Sbjct: 65  LGESLESEMLEMAKEELSELKQEKEVLGDRIKILLLPKDPNDDKNIIMEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY ++AE + +K E ++ +     G K   ++I G N +  LK E G HR+ 
Sbjct: 125 LFAGNLFSMYQKYAELQGWKIEVMDANITGIGGYKEVIMMITGENVFSKLKYESGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EI++ + D R D Y ASGAGGQH+N T SAVR
Sbjct: 185 RVPSTESQGRIHTSTATVVVMP-EAEEVEIDLEDKDIRTDIYHASGAGGQHINKTASAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q ERSQ KN+ +A  +LR ++Y+    ++E  +      K+ +G G  
Sbjct: 244 LTHLPTGIVVAMQDERSQLKNREKAMKILRTRVYD--QLQQEAQSAYDADRKSAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       VL G LD+ + A +   +
Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTLQKLDQVLSGKLDEIIDALVLYDQ 347


>gi|313622330|gb|EFR92817.1| peptide chain release factor 1 [Listeria innocua FSL J1-023]
          Length = 358

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 103/347 (29%), Positives = 172/347 (49%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   LN    DP +  +    + L +E+  +   +   +E ++         EL
Sbjct: 5   LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNINEQIDETREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKL----EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E+ D  + +   +    ++       E  +   +     D  +  LE+   AGG E+ 
Sbjct: 65  LGEKLDDEMREMAKEEFAELQKEKTELEERLKLLLVPKDPNDDKNVILEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AE R +K E ++ +     G K    ++ G +A+  +K E G HR+ 
Sbjct: 125 LFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P   + +EIE+ + D R DT+ ++GAGGQ VNTT SAVR
Sbjct: 185 RVPETESGGRIHTSTATVAILP-EAEEVEIELHDKDIRTDTFASTGAGGQSVNTTMSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+    +RE       + K+ +G G  
Sbjct: 244 LTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKF--EREAREEYDANRKSAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +++G LD+ + A +   +
Sbjct: 302 SERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQ 347


>gi|311033344|ref|ZP_07711434.1| peptide chain release factor 1 [Bacillus sp. m3-13]
          Length = 356

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 113/351 (32%), Positives = 176/351 (50%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68
           +FD       R   L     DP +  +  + +   +E+  +   +   +E +   ++L D
Sbjct: 1   MFDRLQAVEMRYEKLTELLSDPEVISDTKKLREYSKEQSDIQETVEAYREYKAVKEQLDD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127
              +LE  L+ D   +++E    L+  +  +  +     L     D  +  +E+   AGG
Sbjct: 61  AKAMLEDKLDADMREMVKEEIAELEEQQENLADRLHILLLPKDPNDDKNVIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R+AE + +KTE +E       G K    +I G  AY  LK E G 
Sbjct: 121 DEAALFAGDLYRMYSRYAEAQGWKTEVMEAASTGVGGYKEIIFMITGKGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +EIEI + D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLP-EAEEVEIEIHDKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPT  VV CQ E+SQ KNK +A  +LRA++Y+    +RE  A    + K  +G
Sbjct: 240 SAVRLTHIPTNTVVSCQDEKSQIKNKEKAMKVLRARVYDKF--QREVQAEYDANRKQAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L G L + + A +   +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQGKLQEVIDALIMEDQ 347


>gi|325479514|gb|EGC82610.1| peptide chain release factor 1 [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 358

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 116/351 (33%), Positives = 186/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  ++  +    L  K  DP +  ++ +   + RE   L   +    +I++       
Sbjct: 1   MFENIEHIKENYKDLEKKMIDPEVLSDIAKLTKITREYNSLKPIVEKYDQIKEAEDTIEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKL----EVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             EL  E DD  +++   + ++  +       E  +   +     DS D  +E+  GAGG
Sbjct: 61  NKELINEADDQDMVEMLKEEIKENEKLLDEYNEEMKILLIPKDPNDSRDVIIEIRPGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY  +A+K  +KTE +E+      GIK AT +I+G  AY   K E GV
Sbjct: 121 DEAGLFAGDLYRMYHMYADKEGYKTEDVEVSSQGVGGIKDATFMIRGEGAYSRFKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P VD+     +  +D R D +R+SG GGQ VNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVLPEVDELDV-HVDPNDIRTDVFRSSGNGGQSVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+VV  Q E+SQ KNK +A  +L A++YELE +KR +   I ++ K+++G
Sbjct: 240 SAVRLTHIPTGIVVSMQDEKSQIKNKEKAMRILLARIYELEEEKRNKE--IADNRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   + D R N       D L+G++ + + + +   +
Sbjct: 298 TGDRSERIRTYNF-PQGRITDHRINKTIYQLDDFLNGNIGEMIDSLIEEDQ 347


>gi|295097429|emb|CBK86519.1| bacterial peptide chain release factor 2 (bRF-2) [Enterobacter
           cloacae subsp. cloacae NCTC 9394]
          Length = 293

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 167/290 (57%), Positives = 207/290 (71%), Gaps = 1/290 (0%)

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ A
Sbjct: 3   QGLEDVSGLLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDIQA 62

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTE+QDWA+ML+RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+ 
Sbjct: 63  GSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKIIGDYAYGWLRT 122

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS  RRHTSFSS +VYP VD+ I+I+I+ +D RID YRASGAGGQHV
Sbjct: 123 ETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDEDIDIDINPADLRIDVYRASGAGGQHV 182

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K
Sbjct: 183 NRTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNK 242

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           ++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 243 SDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|217967791|ref|YP_002353297.1| peptide chain release factor 2 [Dictyoglomus turgidum DSM 6724]
 gi|217336890|gb|ACK42683.1| peptide chain release factor 2 [Dictyoglomus turgidum DSM 6724]
          Length = 330

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 150/316 (47%), Positives = 205/316 (64%), Gaps = 3/316 (0%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W N  + K ++ +   L   I   ++++  + +     +L  E D+     E        
Sbjct: 8   WDNSEKVKPILTKFNKLQKEIESWEKLKTDIEELSEWKDLLEEGDEYKEEFEKKLKEV-- 65

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           +  ++  + E +L    D  +A L +HAG GGT++QDW  +LLRMY RWAE++ ++ + L
Sbjct: 66  EKSLKNFEIEMVLQDPHDEANAVLSLHAGTGGTDAQDWTEILLRMYIRWAERKGYQVKIL 125

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           +I  GEEAGIKSATLLI+G  AYG+LKGE+GVHRLVRISP+D+N RRHTSF+ + V P +
Sbjct: 126 DISPGEEAGIKSATLLIEGDKAYGYLKGEKGVHRLVRISPFDANHRRHTSFALVEVIPEL 185

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
            +S  IEI   D +I+T+RA GAGGQHVN  +SAVRITHIPTG+VVQCQ ERSQH NK  
Sbjct: 186 PES-TIEIKPEDLKIETFRAGGAGGQHVNKVESAVRITHIPTGIVVQCQNERSQHANKEM 244

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A  +L+A+L ELE +KR E     +    EI WG QIRSYV  PY +VKD RT +E  + 
Sbjct: 245 ALRVLKARLEELEERKRREKIASLKGEVQEISWGNQIRSYVFHPYTLVKDHRTGLEIGNV 304

Query: 336 SDVLDGDLDDFMKATL 351
             V+DG++D F++A L
Sbjct: 305 QAVIDGEIDPFIEAYL 320


>gi|47558934|gb|AAT35567.1| protein release factor 1 [Chlamydia trachomatis]
          Length = 359

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 110/338 (32%), Positives = 173/338 (51%), Gaps = 11/338 (3%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI----QDRLCDNLILLELA 76
           +RL  +  +  DP+++ N  E   L +E   L    +  + +    +    D L L    
Sbjct: 10  KRLEEVEKQISDPNIFSNPKEYSSLSKEHARLSEIKNAHESLVATKKILQDDKLALSTEK 69

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
             E    + +      + ++   +  +   +     D     +E+ AG GG E+  +   
Sbjct: 70  DPEIVAMLEEGVLVGEEAVERLSKQLENLLIPPDPDDDLSVIMELRAGTGGDEAALFVGD 129

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
            +RMY  +A  + ++ E L   + +  G K   + I G +   +L+ E G HR+ R+   
Sbjct: 130 CVRMYHLYAASKGWQCEVLSASESDLGGYKEYVMGISGASVKRFLQYEAGTHRVQRVPET 189

Query: 197 DSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           ++  R HTS  ++ V P   +D  E+ I E D RIDT+R+SGAGGQHVN TDSAVRITHI
Sbjct: 190 ETQGRVHTSAVTVAVLPEPAEDDEEVFIDEKDLRIDTFRSSGAGGQHVNVTDSAVRITHI 249

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           P+GVVV CQ ERSQHKNKA+A  +L+A++ + E+QKR + A+   S   ++G G    +I
Sbjct: 250 PSGVVVTCQDERSQHKNKAKAMRVLKARIRDAEVQKRAQEASAMRS--AQVGSGDRSERI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           R+Y   P   V D R  +   +   V++G+LD    A 
Sbjct: 308 RTYNF-PQNRVTDHRIALTLYNLDRVMEGELDMITTAL 344


>gi|90417430|ref|ZP_01225354.1| peptide chain release factor 2 [marine gamma proteobacterium
           HTCC2207]
 gi|90330764|gb|EAS46039.1| peptide chain release factor 2 [marine gamma proteobacterium
           HTCC2207]
          Length = 310

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 161/308 (52%), Positives = 219/308 (71%), Gaps = 1/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
            RER  L+  +  I+++   + D+  LL +A+EEDD   + +    +  ++ ++   +F 
Sbjct: 2   GRERSALEAVVKTIEDLDTGVADSRELLAMAVEEDDADTVADVETEIAALEAQLAKLEFR 61

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            + SGE D N+AYL++ +G+GGTE+QDWA MLLRMY RWA+ + FK E +E   G+ AGI
Sbjct: 62  RMFSGEMDPNNAYLDIQSGSGGTEAQDWAEMLLRMYLRWADDKGFKAELVECSAGDVAGI 121

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K AT+ I G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ 
Sbjct: 122 KGATVQISGEYAYGWLRTEIGVHRLVRKSPFDSGNRRHTSFSAVYVSPEIDDNIEIDINP 181

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD R DTYRASGAGGQH+N TDSAVR+TH P+G+VVQ Q +RSQH+N+ + W MLRAKLY
Sbjct: 182 SDVRTDTYRASGAGGQHINKTDSAVRLTHGPSGIVVQSQSQRSQHQNRDKCWQMLRAKLY 241

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           ELE+  R++ A   E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD 
Sbjct: 242 ELEVSIRQKAAQATEDTKSDIGWGSQIRSYVLDD-ARIKDLRTGVETRNTGAVLDGKLDQ 300

Query: 346 FMKATLAI 353
           F+ A+L  
Sbjct: 301 FIVASLKA 308


>gi|108800851|ref|YP_641048.1| peptide chain release factor 1 [Mycobacterium sp. MCS]
 gi|119869991|ref|YP_939943.1| peptide chain release factor 1 [Mycobacterium sp. KMS]
 gi|126436449|ref|YP_001072140.1| peptide chain release factor 1 [Mycobacterium sp. JLS]
 gi|119361564|sp|Q1B542|RF1_MYCSS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223572|sp|A3Q3C2|RF1_MYCSJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223573|sp|A1UJZ5|RF1_MYCSK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|108771270|gb|ABG09992.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp.
           MCS]
 gi|119696080|gb|ABL93153.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp.
           KMS]
 gi|126236249|gb|ABN99649.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp.
           JLS]
          Length = 357

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 116/346 (33%), Positives = 171/346 (49%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L  +  DP L  +  +A+   R    L   ++  ++++    D     EL
Sbjct: 8   IDALLAEHADLERQLADPALHADAGKARKAGRRFAQLAPIVATYRKLEAARGDLEAAREL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
             ++   +      +                      D++D  LEV +G GG ES  +A 
Sbjct: 68  GADDASFAAEVPELEATVDQLETQLSDLL--APRDPHDADDIVLEVKSGEGGEESALFAA 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190
            L RMY R+AE+  +    L+    +  G K ATL I+         +  LK E GVHR+
Sbjct: 126 DLARMYIRYAERHGWSVTILDETTSDLGGYKDATLSIRSKGDSADGVWSRLKFEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + VYP  ++  +++I ESD RID YR+SG GGQ VNTTDSAV
Sbjct: 186 QRVPVTESQGRVHTSAAGVLVYPEPEEVEQVQIDESDLRIDVYRSSGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG+VV CQ ERSQ +NKA+A  +L A+L  L  ++    A+   +S+   +   
Sbjct: 246 RITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQSLAEEQASADASADRASQIRTVDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N +  +   VLDGDLD    A  A  K
Sbjct: 306 ERIRTYNF-PENRIADHRINFKAHNLDQVLDGDLDPLFDALAAADK 350


>gi|15606216|ref|NP_213594.1| peptide chain release factor RF-1 [Aquifex aeolicus VF5]
 gi|6225940|sp|O67032|RF1_AQUAE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|2983407|gb|AAC06991.1| peptide chain release factor RF-1 [Aquifex aeolicus VF5]
          Length = 362

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 122/345 (35%), Positives = 189/345 (54%), Gaps = 10/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL---DNAISFIKEIQDRLCDNLIL 72
            D   ++   L  +   P + Q+V + K L +E + L   +      K+ Q  L +   L
Sbjct: 10  LDKLQEKYRKLQEELSKPEVIQDVEKYKKLSKELKELQEINELYERYKKAQKELKEAKEL 69

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L+ + ++      +E +   + +K   E  +   +     D+ +  LE+ AGAGG E+  
Sbjct: 70  LKSSDKDLRELAEEEVNRLTEEMKKLEEELKVHLVPKDPNDTKNVILEIRAGAGGEEAAL 129

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY ++AE++ +K   L  +     G K    LI+G  AY  LK E GVHR+ R
Sbjct: 130 FAADLFRMYQKYAEEKGWKVSILSSNKTGLGGYKEVIALIEGEGAYSRLKYESGVHRVQR 189

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S+ R HTS +++ V P VD++    I   + +I+T+RASGAGGQ+VNTT++AVRI
Sbjct: 190 VPVTESSGRIHTSTATVAVLPEVDETDIK-IKPEELKIETFRASGAGGQYVNTTETAVRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311
           THIPTG+VVQCQ ERSQ +NK +A  +L AKL +   +K++E   I +  K ++G G + 
Sbjct: 249 THIPTGIVVQCQDERSQFQNKQKALKILYAKLKDYYERKKQEE--IAKERKEQVGTGERS 306

Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             IR+Y   P   V D R N+      DVL+G LD+ + A  A +
Sbjct: 307 EKIRTYNF-PQNRVTDHRINLTLYKLQDVLEGKLDEIIDALRAKE 350


>gi|114569849|ref|YP_756529.1| peptide chain release factor 2 [Maricaulis maris MCS10]
 gi|114340311|gb|ABI65591.1| bacterial peptide chain release factor 2 (bRF-2) [Maricaulis maris
           MCS10]
          Length = 321

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 189/313 (60%), Positives = 237/313 (75%), Gaps = 4/313 (1%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRER  L+ AI+ + E +    D+L ++ELA  EDD  +++E    L  +   +   Q E
Sbjct: 1   MRERNRLEAAITTVVEAEQEYSDSLEIIELAEMEDDAEMVEEAVAGLNALAERMRRAQLE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGEAD NDA++E+H+GAGGTESQDWA ML RMY+RWA    +K E +E   GEEAG+
Sbjct: 61  TLLSGEADGNDAFVEIHSGAGGTESQDWAAMLARMYSRWANAHGYKVETMEEQAGEEAGL 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KS T+L+KG NAYGWLK E GVHRLVRISP+DS++RRHTSFSS+ VYP +DD+I+++I  
Sbjct: 121 KSTTILVKGENAYGWLKTEAGVHRLVRISPFDSSARRHTSFSSVGVYPQIDDAIDVDIDV 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPT----GVVVQCQQERSQHKNKAQAWNMLR 281
           S  R DTYRASGAGGQH+N TDSAVR+T+        VVVQCQ +RSQHKN++QAW+MLR
Sbjct: 181 SKVRTDTYRASGAGGQHINKTDSAVRLTYDMPGEEKPVVVQCQNDRSQHKNRSQAWDMLR 240

Query: 282 AKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           A++YE+ELQ+RE  A     SK+EIGWG QIRSYVLQPYQMVKDLRTN+E ++   VLDG
Sbjct: 241 ARVYEIELQRREAAAQAEADSKSEIGWGHQIRSYVLQPYQMVKDLRTNVETSNTGGVLDG 300

Query: 342 DLDDFMKATLAIK 354
           DLDDFM A LA +
Sbjct: 301 DLDDFMAAALAAR 313


>gi|161615988|ref|YP_001589953.1| hypothetical protein SPAB_03788 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|213425820|ref|ZP_03358570.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213646961|ref|ZP_03377014.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|238909840|ref|ZP_04653677.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|289823819|ref|ZP_06543431.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|16421591|gb|AAL21916.1| peptide chain release factor RF-2 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|161365352|gb|ABX69120.1| hypothetical protein SPAB_03788 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|261248173|emb|CBG26009.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|301159597|emb|CBW19116.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312914062|dbj|BAJ38036.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|320087470|emb|CBY97235.1| Peptide chain release factor 1 RF-1 [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321225716|gb|EFX50770.1| Peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322613439|gb|EFY10380.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322621031|gb|EFY17889.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322624095|gb|EFY20929.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322628166|gb|EFY24955.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322633285|gb|EFY30027.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322636137|gb|EFY32845.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322639476|gb|EFY36164.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322647592|gb|EFY44081.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322648776|gb|EFY45223.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322653831|gb|EFY50157.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322657937|gb|EFY54205.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322664040|gb|EFY60239.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322668949|gb|EFY65100.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322673057|gb|EFY69164.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322677952|gb|EFY74015.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322681128|gb|EFY77161.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322687942|gb|EFY83909.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323194862|gb|EFZ80049.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323196613|gb|EFZ81761.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323202687|gb|EFZ87727.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323207826|gb|EFZ92772.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323212622|gb|EFZ97439.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323214895|gb|EFZ99643.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323222626|gb|EGA06991.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323225095|gb|EGA09347.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323230617|gb|EGA14735.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323235032|gb|EGA19118.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323239071|gb|EGA23121.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323244571|gb|EGA28577.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323247186|gb|EGA31152.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323253331|gb|EGA37160.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323256362|gb|EGA40098.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323262462|gb|EGA46018.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323267442|gb|EGA50926.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323269154|gb|EGA52609.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
 gi|326624786|gb|EGE31131.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|332989908|gb|AEF08891.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 293

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 170/290 (58%), Positives = 208/290 (71%), Gaps = 1/290 (0%)

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ A
Sbjct: 3   QGLDDVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQA 62

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTE+QDWA+MLLRMY RWAE R FKTE +E  +GE AGIKSAT+ I G  AYGWL+ 
Sbjct: 63  GSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLRT 122

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHV
Sbjct: 123 ETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHV 182

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K
Sbjct: 183 NRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTK 242

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           ++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 243 SDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|300704641|ref|YP_003746244.1| peptide chain release factor rf-2; programmed frameshift [Ralstonia
           solanacearum CFBP2957]
 gi|299072305|emb|CBJ43638.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia
           solanacearum CFBP2957]
          Length = 300

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 158/298 (53%), Positives = 219/298 (73%), Gaps = 1/298 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  + ++ + L     L ELA EE D   ++    +   ++  VE  +F  + SG  D+ 
Sbjct: 2   VFALTKLDEDLTGGAELFELAREEGDDDTIEAIETDTAGMRAIVEDMEFRRMFSGPMDAA 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           + ++++ AGAGGTE+ DWA+MLLR Y ++ E++ FK E LE  +G+ AGIKSA++ ++G 
Sbjct: 62  NCFIDIQAGAGGTEACDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSASIKVEGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+G+L+ E GVHRLVR SP+DS   RHTSFSSI+VYP VDDSIEIE++ +D R+DTYRA
Sbjct: 122 YAFGFLRTETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQH+N TDSAVRITHIPTG+VVQCQ +RSQH+N+A+A  ML+++LYE EL+KR+  
Sbjct: 182 SGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAE 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           A+  E+SKT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 242 ADKLEASKTDVGWGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDAFIQASLKQ 298


>gi|302759937|ref|XP_002963391.1| hypothetical protein SELMODRAFT_141857 [Selaginella moellendorffii]
 gi|300168659|gb|EFJ35262.1| hypothetical protein SELMODRAFT_141857 [Selaginella moellendorffii]
          Length = 412

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 106/347 (30%), Positives = 180/347 (51%), Gaps = 12/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+A Q    L  K  DP +  +  E + L +    ++  ++  ++ ++   +   L E+
Sbjct: 59  LDSAEQTYKELTVKLADPDVANDPSEFQKLAKAIADMEEVVTSYQKYKESQRELDDLQEM 118

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D  + +   +    +K  +   +       L S   DS +  LEV AG GG E+ 
Sbjct: 119 IKSSGDKELAEMAVEESAILKENITNLEEYLKVLLLPSDPLDSRNIMLEVRAGTGGDEAG 178

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            WA  L+RMY ++AE+ ++    +   + E+ G K   L I G   Y  LK E GVHR+ 
Sbjct: 179 IWAGDLVRMYQKYAEQNRWNWSPISQTEAEKGGFKEYVLEITGDRVYSKLKYESGVHRVQ 238

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P   D +E+ I   D  + T R+ GAGGQ+VN  ++AV 
Sbjct: 239 RVPATESQGRVHTSTATVAIMP-EVDEVEVVIDPKDIELTTARSGGAGGQNVNKVETAVD 297

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           + H PTG+ + C +ER+Q KNKA+A+ +LRAKLYE++L +++E   I    ++++G G  
Sbjct: 298 LFHKPTGIRIFCTEERTQLKNKARAFQLLRAKLYEMKLAEQQE--KISSQRRSQVGTGAR 355

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y  +    V D RT I        L G+++  ++A  A+++
Sbjct: 356 SEKIRTYNYKD-NRVSDHRTKI-NFDLDSFLSGNIESAVQACAAVEQ 400


>gi|114561906|ref|YP_749419.1| peptide chain release factor 1 [Shewanella frigidimarina NCIMB 400]
 gi|119361604|sp|Q087I4|RF1_SHEFN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|114333199|gb|ABI70581.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
           frigidimarina NCIMB 400]
          Length = 361

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 114/339 (33%), Positives = 184/339 (54%), Gaps = 9/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72
            +  ++R   +     D  +  +    + L +E   L++ +S  K  Q    D      +
Sbjct: 9   LEGLLERNEEVLALLSDATVISDQDRFRGLSKEYSQLEDVVSSFKAFQQAQKDFDYAKEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           LE    E       E   + Q ++   +  Q   L +   D  +A+LE+ AGAGG E+  
Sbjct: 69  LEEDDLEMREMAQDEYKQSKQVLEKLEDELQVLLLPTDPNDDTNAFLEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+ E  +++ E + +++GE  G K   + I G  AYG LK E G HR+ R
Sbjct: 129 FAGDLYRMYSRYCEANRWQMEVMNVNEGEHGGFKEIIVKISGDGAYGKLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   V ++  I I+ +D ++DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRVHTSACTVVVLHEVPEAEAISINAADLKVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIP+G++V+CQ +RSQHKN+AQA ++L A++  +E +KR        + ++ +  G   
Sbjct: 249 THIPSGIIVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEET--TRRSLVASGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +IR+Y   P   V D R N+     ++V++GDL+  + 
Sbjct: 307 ERIRTYNY-PQGRVSDHRINLTLYRLNEVMEGDLNVLLD 344


>gi|296104552|ref|YP_003614698.1| peptide chain release factor 2 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295059011|gb|ADF63749.1| peptide chain release factor 2 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 293

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 168/290 (57%), Positives = 207/290 (71%), Gaps = 1/290 (0%)

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ A
Sbjct: 3   QGLEDVSGLLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDIQA 62

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTE+QDWA+ML+RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+ 
Sbjct: 63  GSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKIIGDYAYGWLRT 122

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS  RRHTSFSS +VYP VD+ I+IEI+ +D RID YRASGAGGQHV
Sbjct: 123 ETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDEDIDIEINPADLRIDVYRASGAGGQHV 182

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K
Sbjct: 183 NRTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNK 242

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           ++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 243 SDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|83748475|ref|ZP_00945497.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Ralstonia
           solanacearum UW551]
 gi|207725248|ref|YP_002255644.1| peptide chain release factor 2 (rf-2) protein [Ralstonia
           solanacearum MolK2]
 gi|207743623|ref|YP_002260015.1| peptide chain release factor 2 (rf-2) protein [Ralstonia
           solanacearum IPO1609]
 gi|83724886|gb|EAP72042.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Ralstonia
           solanacearum UW551]
 gi|206590482|emb|CAQ37444.1| peptide chain release factor 2 (rf-2) protein [Ralstonia
           solanacearum MolK2]
 gi|206595022|emb|CAQ61949.1| peptide chain release factor 2 (rf-2) protein [Ralstonia
           solanacearum IPO1609]
          Length = 300

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 158/298 (53%), Positives = 219/298 (73%), Gaps = 1/298 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  + ++ + L     L ELA EE D   ++    +   ++  VE  +F  + SG  D+ 
Sbjct: 2   VFALTKLDEDLTGGAELFELAREEGDDDTIEAIEADTAGMRAIVEDMEFRRMFSGPMDAA 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           + ++++ AGAGGTE+ DWA+MLLR Y ++ E++ FK E LE  +G+ AGIKSA++ ++G 
Sbjct: 62  NCFIDIQAGAGGTEACDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSASIKVEGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A+G+L+ E GVHRLVR SP+DS   RHTSFSSI+VYP VDDSIEIE++ +D R+DTYRA
Sbjct: 122 YAFGFLRTETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEVDDSIEIEVNPADLRVDTYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQH+N TDSAVRITHIPTG+VVQCQ +RSQH+N+A+A  ML+++LYE EL+KR+  
Sbjct: 182 SGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAE 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           A+  E+SKT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 242 ADKLEASKTDVGWGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDAFIQASLKQ 298


>gi|113971503|ref|YP_735296.1| peptide chain release factor 1 [Shewanella sp. MR-4]
 gi|114046304|ref|YP_736854.1| peptide chain release factor 1 [Shewanella sp. MR-7]
 gi|119361605|sp|Q0HFC8|RF1_SHESM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361606|sp|Q0HYK8|RF1_SHESR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|113886187|gb|ABI40239.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp.
           MR-4]
 gi|113887746|gb|ABI41797.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp.
           MR-7]
          Length = 363

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 183/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     D  +  +    + L +E   L+  ++  K  Q  L D     E+
Sbjct: 9   LEGLLERNEEVLALLGDASVIADQERFRALSKEYSQLEEVVAGFKAYQQALADLESAKEM 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D         +       ++      Q   L     D  +A++E+ AGAGG E+  
Sbjct: 69  LEEDDAEMREMAQEEIKAAKAELERLEAELQILLLPKDPNDDTNAFIEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE  +++ E +  ++GE  G K   + + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAEANRWQLEIMSSNEGEHGGFKEIIVKVSGEGAYGKLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   V ++  I I+ +D ++DT+R+SGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRVHTSAVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV+CQ +RSQHKN+AQA ++L A++  +E +KR        + ++ +  G   
Sbjct: 249 THIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEE--STRRSLVASGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            ++R+Y   P   V + R N+     ++V++GDLD  +   +   +
Sbjct: 307 ERVRTYNF-PQGRVSEHRINLTLYRLNEVMEGDLDAILGPLMQEHQ 351


>gi|261342293|ref|ZP_05970151.1| peptide chain release factor 2 [Enterobacter cancerogenus ATCC
           35316]
 gi|288315634|gb|EFC54572.1| peptide chain release factor 2 [Enterobacter cancerogenus ATCC
           35316]
          Length = 293

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 167/290 (57%), Positives = 206/290 (71%), Gaps = 1/290 (0%)

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ A
Sbjct: 3   QGLEDVSGLLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDIQA 62

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AG+KS T+ I G  AYGWL+ 
Sbjct: 63  GSGGTEAQDWASMLTRMYLRWAEARGFKTEIIEESEGEVAGLKSVTIKIIGDYAYGWLRT 122

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS  RRHTSFSS +VYP V+D I+IEI+ +D RID YRASGAGGQHV
Sbjct: 123 ETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVNDDIDIEINPADLRIDVYRASGAGGQHV 182

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K
Sbjct: 183 NRTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNK 242

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           ++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 243 SDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|254504878|ref|ZP_05117029.1| peptide chain release factor 1 [Labrenzia alexandrii DFL-11]
 gi|222440949|gb|EEE47628.1| peptide chain release factor 1 [Labrenzia alexandrii DFL-11]
          Length = 357

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 125/346 (36%), Positives = 188/346 (54%), Gaps = 18/346 (5%)

Query: 16  WDNAVQRLSFLNTKTE-DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
            DN + R + L      +P    +      L RE   L+  +  I+ +     D     +
Sbjct: 7   LDNLLDRFAELEHMMSANP----DPASYVKLSREYAGLEPLVLKIRALVKAEEDLKGAED 62

Query: 75  LALEEDDCSILQE-----TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           L  +      ++E       +  + ++   +  +   L   EAD+NDA LEV AG GG E
Sbjct: 63  LIEDPATDPEMRELAELERDELSENVERLTQDVRIGLLPKDEADTNDAILEVRAGTGGDE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY R+AE R +K E L   +GE  G K     + G N +  LK E GVHR
Sbjct: 123 AALFAGDLFRMYQRYAELRGWKVEILSASEGEVGGFKEVIASVSGENVFARLKFESGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P   ++++I++ +SD RIDT+RASGAGGQHVNTTDSA
Sbjct: 183 VQRVPATESGGRIHTSAATVAVLP-QAENVDIDVQDSDLRIDTFRASGAGGQHVNTTDSA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG+VV  Q ERSQHKNKA+A  +LRA++Y+ E ++    +   E+ + ++G G
Sbjct: 242 VRITHIPTGIVVAVQDERSQHKNKARAMQLLRARIYDEERER--AASERTEARRLQVGSG 299

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
               +IR+Y   P   V D R  +       ++ G+ LD+ ++A +
Sbjct: 300 DRSERIRTYNF-PQGRVTDHRIGLTLYKLDQIIAGESLDEVIEALI 344


>gi|302536943|ref|ZP_07289285.1| peptide chain release factor 1 [Streptomyces sp. C]
 gi|302445838|gb|EFL17654.1| peptide chain release factor 1 [Streptomyces sp. C]
          Length = 359

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 118/350 (33%), Positives = 178/350 (50%), Gaps = 16/350 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  ++ V   + L  K  DP +  +   A+ L +    L   ++  +  +    D   
Sbjct: 1   MFEAVEDLVGEHADLEKKLADPSVHSDQANARKLNKRYAELTPIVATFRAWKQSAEDIET 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EL    DD     E  +   + +   E  +   +    +D  D  LE+ AGAGG ES 
Sbjct: 61  AKEL--AADDPDFAAEAKELSAQREELTEKLRLLLVPRDPSDDKDVLLEIKAGAGGDESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG----------PNAYGWL 181
            +A  LLRMY R+AE+  +KTE ++  + E  G K   + ++              +  +
Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVSVRTKGGNGATEPGQGVWARM 178

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   +S  R HTS + + V P   + +E+EI+ +D RID YR+SG GGQ
Sbjct: 179 KYEGGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEVEVEINMNDLRIDVYRSSGPGGQ 237

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITHIPTGVV  CQ E+SQ +NK QA  +LR++L     +  E+ A+    
Sbjct: 238 SVNTTDSAVRITHIPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEAAEQEASDQRR 297

Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           S+   +    +IR+Y   P   + D RT  +  +   VLDGDLD  ++A 
Sbjct: 298 SQVRSVDRSEKIRTYNF-PENRISDHRTGFKAYNLDQVLDGDLDSVIQAC 346


>gi|329766951|ref|ZP_08258479.1| peptide chain release factor 1 [Gemella haemolysans M341]
 gi|328837676|gb|EGF87301.1| peptide chain release factor 1 [Gemella haemolysans M341]
          Length = 362

 Score =  220 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 115/347 (33%), Positives = 188/347 (54%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   LN    DP +  +  +     +E++ ++  ++  +E +D +       EL
Sbjct: 7   LEIVEERYEKLNELLSDPDVVSDTKKLMEYSKEQRSIEKTVAVFREYKDIVQQIKDTKEL 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E+D  + +   + ++ ++  +   +       L     D  +  +EV   AGG E+Q
Sbjct: 67  LEIEEDKEMKEMMQEEIKELEPTLAPMEEELKILLLPKDPNDGKNVVVEVRGAAGGDEAQ 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMYTR+AE + +K + LE  +    GIK    +I G + Y  +K E G HR+ 
Sbjct: 127 LFAGDLLRMYTRFAESQGWKVDVLERSETGIGGIKEVIFIISGEDVYSKMKFESGAHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P   + IEI+I+E+D R+DT+ +SGAGGQ VNTT SAVR
Sbjct: 187 RVPTTESSGRIHTSTATVVVLP-EAEEIEIDINENDIRVDTFASSGAGGQSVNTTMSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTGVVV  Q ERSQ KNK +A  +LRA++Y+    ++EE A      K+++G G  
Sbjct: 246 LTHIPTGVVVSMQDERSQIKNKEKAMKVLRARVYDKY--QQEEQAKFDAERKSKVGTGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +++G LD+ ++A    ++
Sbjct: 304 SERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEVLEALRIAEQ 349


>gi|255994191|ref|ZP_05427326.1| peptide chain release factor 2 [Eubacterium saphenum ATCC 49989]
 gi|255993859|gb|EEU03948.1| peptide chain release factor 2 [Eubacterium saphenum ATCC 49989]
          Length = 320

 Score =  220 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 147/308 (47%), Positives = 207/308 (67%), Gaps = 1/308 (0%)

Query: 42  AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI-KLEVE 100
           AK+L++E+Q ++  +S   E+   + D   L  +  E      ++  + ++ +  +    
Sbjct: 3   AKILLKEKQEVEVVVSQYDELLLLIDDAKTLQAMVSEGLVEEDMEMLATDIFKKLEAGYH 62

Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
             +  +LL+G+ D  +AY+ +H+G+GG+++QDW  MLLRMYTRWAE + F+ + ++++  
Sbjct: 63  KLKVTTLLAGKHDKANAYISIHSGSGGSDAQDWGKMLLRMYTRWAENKGFQIDVIDLNQN 122

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220
             AG KSATLLIKG NAYG+LK E+GVHRLVRISP+DS+SRRHTSF+S+ V P +     
Sbjct: 123 GVAGFKSATLLIKGLNAYGYLKKERGVHRLVRISPFDSSSRRHTSFASVDVIPEIKTDKV 182

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           I+I + D RID +RASGAGGQHVN TDSAVRI H+PT +VV CQ ERSQH NK  A +ML
Sbjct: 183 IKIDDKDLRIDKFRASGAGGQHVNKTDSAVRIIHLPTKIVVTCQNERSQHMNKEAAMHML 242

Query: 281 RAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
            +KL EL+ ++ +E  N       +I WG QIRSYV  PY+MVKD RT  E  +   V+D
Sbjct: 243 ISKLMELKEKEHKESINDLTGDYNQITWGSQIRSYVFHPYRMVKDHRTGAEMGNVDAVMD 302

Query: 341 GDLDDFMK 348
           GDLD F++
Sbjct: 303 GDLDYFIQ 310


>gi|282856730|ref|ZP_06265994.1| peptide chain release factor 2 [Pyramidobacter piscolens W5455]
 gi|282585426|gb|EFB90730.1| peptide chain release factor 2 [Pyramidobacter piscolens W5455]
          Length = 252

 Score =  220 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 150/248 (60%), Positives = 183/248 (73%)

Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167
           LSG  D   A L VHAG+GG +SQDWA ML RMY RW E+R+FKT+ L+    EEAGIKS
Sbjct: 5   LSGPYDHCSAILSVHAGSGGLDSQDWAEMLYRMYLRWCEERRFKTKLLDYQHDEEAGIKS 64

Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
           ATLLI+G  AYG+L+ E GVHRLVRISP+D+N RRHTSF+S+ V P + D +++EI+  D
Sbjct: 65  ATLLIQGETAYGYLRSEIGVHRLVRISPFDTNKRRHTSFASVDVSPQLPDDVDVEIAPED 124

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            RIDTYR+SGAGGQHVN TDSAVRITH+PTG+VV CQ ERSQH NKA A ++L++KLY+ 
Sbjct: 125 LRIDTYRSSGAGGQHVNMTDSAVRITHLPTGIVVSCQNERSQHMNKATAMSVLKSKLYQR 184

Query: 288 ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           EL++R+   N     K E  WG QIRSYVLQPY +VKD RT  E  +   VLDG LD F+
Sbjct: 185 ELEQRQAEMNALAGEKKESTWGSQIRSYVLQPYTLVKDHRTGEETGNVGGVLDGGLDPFI 244

Query: 348 KATLAIKK 355
            A L   +
Sbjct: 245 LAYLRWAR 252


>gi|226324356|ref|ZP_03799874.1| hypothetical protein COPCOM_02137 [Coprococcus comes ATCC 27758]
 gi|225206804|gb|EEG89158.1| hypothetical protein COPCOM_02137 [Coprococcus comes ATCC 27758]
          Length = 313

 Score =  220 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 149/309 (48%), Positives = 212/309 (68%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+E + + + +  +++++    D   L+EL  EE+D  +++E    + + + E E  +  
Sbjct: 1   MKELRKMQDCVKEVRDLESSYEDINALIELTEEEEDREMIKEIQREIAKFEKEFEDLRIR 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LLSGE DS +A + +HAGAGGT+S DWANML RMYTR+A+ + F+   L+  DG+  G+
Sbjct: 61  TLLSGEYDSCNAIVTLHAGAGGTDSCDWANMLYRMYTRYAQSKGFQITVLDYQDGDITGL 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K  T  + G NAYG+ + E+GVHRLVRISP++S  +R TSF+S  V P ++D I+IE+++
Sbjct: 121 KGITFEVTGDNAYGYFQSEKGVHRLVRISPFNSAGKRQTSFASCDVIPDIEDDIDIELND 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D RIDTYR+SGAGGQH+N T SAVRITH+PTG+VVQCQ ERSQ  NK +A  ML+AKLY
Sbjct: 181 DDLRIDTYRSSGAGGQHINKTSSAVRITHLPTGIVVQCQNERSQLFNKDKAMQMLKAKLY 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            L+ Q++EE  +       +I +G QIRSY+L PY +VKD RT  E  + S VLDG+LD 
Sbjct: 241 LLKKQEQEEKVSGIRGEVQDINFGSQIRSYILHPYNLVKDHRTGEETGNVSAVLDGELDP 300

Query: 346 FMKATLAIK 354
           F+ A L  +
Sbjct: 301 FINAYLKQR 309


>gi|62181551|ref|YP_217968.1| peptide chain release factor RF-2 [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|205353965|ref|YP_002227766.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207858304|ref|YP_002244955.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224584830|ref|YP_002638628.1| peptide chain release factor RF-2 [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|62129184|gb|AAX66887.1| peptide chain release factor RF-2 [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|205273746|emb|CAR38741.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|206710107|emb|CAR34462.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224469357|gb|ACN47187.1| peptide chain release factor RF-2 [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|322716032|gb|EFZ07603.1| peptide chain release factor RF-2 [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|326629079|gb|EGE35422.1| peptide chain release factor RF-2 [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 293

 Score =  220 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 170/290 (58%), Positives = 208/290 (71%), Gaps = 1/290 (0%)

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ A
Sbjct: 3   QGLDDVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQA 62

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTE+QDWA+MLLRMY RWAE R FKTE +E  +GE AGIKSAT+ I G  AYGWL+ 
Sbjct: 63  GSGGTEAQDWASMLLRMYLRWAEARGFKTEIIEESEGEVAGIKSATIKISGEYAYGWLRT 122

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHV
Sbjct: 123 ETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHV 182

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K
Sbjct: 183 NRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTK 242

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           ++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 243 SDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|52842546|ref|YP_096345.1| peptide chain release factor 1 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|54295177|ref|YP_127592.1| peptide chain release factor 1 [Legionella pneumophila str. Lens]
 gi|54298226|ref|YP_124595.1| peptide chain release factor 1 [Legionella pneumophila str. Paris]
 gi|61214584|sp|Q5WUB1|RF1_LEGPL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|61214585|sp|Q5X2V3|RF1_LEGPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|61214588|sp|Q5ZT29|RF1_LEGPH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|52629657|gb|AAU28398.1| peptide chain release factor 1 (RF-1) [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|53752011|emb|CAH13437.1| peptide chain release factor 1 [Legionella pneumophila str. Paris]
 gi|53755009|emb|CAH16497.1| peptide chain release factor 1 [Legionella pneumophila str. Lens]
 gi|307611181|emb|CBX00825.1| peptide chain release factor 1 [Legionella pneumophila 130b]
          Length = 362

 Score =  220 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 114/343 (33%), Positives = 175/343 (51%), Gaps = 9/343 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
                 ++R   +     +  +  +  + K L +E   L+      +   +   +   L 
Sbjct: 7   LKLQQMLERYEEVGRLLSEASIIADQNQFKSLSKEYAQLEPVSQCYESYLEAKNNLDSLN 66

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESL---LSGEADSNDAYLEVHAGAGGTES 130
           EL   +D         +     K   E  +            D  + YLEV AG GG E+
Sbjct: 67  ELLESDDKDLATMAEEEIDTVKKQIEELDEQLQWHLIPKDPDDERNIYLEVRAGTGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY+R+AE + ++ E +    GE  G K     I G   Y  LK E G HR+
Sbjct: 127 AIFAGDLFRMYSRYAESQGWQIELISASHGEHGGYKEIIAKISGQAVYSQLKFESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ + P VD+  +I+I+  D RIDTYR+SGAGGQHVN TDSA+
Sbjct: 187 QRVPETESQGRVHTSACTVAIMPEVDEINDIQINPDDLRIDTYRSSGAGGQHVNKTDSAI 246

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTGVVV+CQ ERSQHKN+A+A ++L+ +L + E+ K+++     ++ K+ +G G 
Sbjct: 247 RITHIPTGVVVECQDERSQHKNRAKAMSLLKTRLLDAEVSKQKQEQ--AQTRKSLVGTGD 304

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              +IR+Y   P   + D R N+     SD+++G+L   +   
Sbjct: 305 RSERIRTYNF-PQGRLTDHRINLTIYQLSDIMEGNLSLVIDPL 346


>gi|301060315|ref|ZP_07201178.1| peptide chain release factor 1 [delta proteobacterium NaphS2]
 gi|300445511|gb|EFK09413.1| peptide chain release factor 1 [delta proteobacterium NaphS2]
          Length = 358

 Score =  220 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 123/350 (35%), Positives = 184/350 (52%), Gaps = 11/350 (3%)

Query: 13  LFDW-DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCD 68
           +FD      +R   L T    P + Q+    +   +E   L   I+ ++E   +QD + +
Sbjct: 3   MFDKMKETEERYRELETFLGQPEIIQDQKRFQKYAKEHSDLTPIITVLREHQALQDEIAE 62

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           +  LL+    E      +E      R++   +      L     D  +  LE+ AG GG 
Sbjct: 63  SQSLLQDPDPEIKKLAKEEIEGLNDRLERTADELTVLLLPKDPNDEKNILLEIRAGTGGE 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY+R+AE R++KTE L  +     G K   +LI+G   +  LK E GVH
Sbjct: 123 EAALFAADLFRMYSRYAELRRWKTEILSQNMTGIGGFKEVIVLIEGHRVFSRLKYESGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS  ++ V P   + +++EI   D RID YR+SG GGQHVNTTDS
Sbjct: 183 RVQRVPETEAQGRIHTSAVTVAVLP-EAEEVDVEIKPEDLRIDVYRSSGHGGQHVNTTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VV CQ E+SQHKNKA+A  +LR+++ +LE   +   + I E  KT +G 
Sbjct: 242 AVRITHLPTGLVVTCQDEKSQHKNKAKAMKVLRSRMLDLETAHQ--HSRISEERKTMVGT 299

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G    +IR+Y   P   V D R  +      D L GDL+  ++  +   +
Sbjct: 300 GDRSERIRTYNF-PQGRVTDHRIGLTLYKLDDFLQGDLNLIIEPLITYFQ 348


>gi|241890031|ref|ZP_04777329.1| peptide chain release factor 1 [Gemella haemolysans ATCC 10379]
 gi|241863653|gb|EER68037.1| peptide chain release factor 1 [Gemella haemolysans ATCC 10379]
          Length = 362

 Score =  220 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 189/347 (54%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   LN    DP +  +  +     +E++ ++  ++  +E +D +       EL
Sbjct: 7   LEIVEERYEKLNELLSDPDVVSDTKKLMEYSKEQRSIEKTVAVFREYKDIVQQIKDTKEL 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E+D  + +   + ++ ++  +   +       L     D  +  +EV   AGG E+Q
Sbjct: 67  LEIEEDKEMKEMMQEEIKELEPTLAPMEEELKILLLPKDPNDGKNVVVEVRGAAGGDEAQ 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMYTR+AE + +K + LE  +    GIK A  +I G + Y  +K E G HR+ 
Sbjct: 127 LFAGDLLRMYTRFAESQGWKVDVLERSETGIGGIKEAIFIISGEDVYSKMKFESGAHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS +++ V P   + IEI+I+E+D R+DT+ +SGAGGQ VNTT SAVR
Sbjct: 187 RVPTTESSGRIHTSTATVVVLP-EAEEIEIDINENDIRVDTFASSGAGGQSVNTTMSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTGVVV  Q ERSQ KNK +A  +LRA++Y+    ++EE A      K+++G G  
Sbjct: 246 LTHIPTGVVVSMQDERSQIKNKEKAMKVLRARVYDKY--QQEEQAKFDAERKSKVGTGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +++G LD+ ++A    ++
Sbjct: 304 SERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEVLEALRIAEQ 349


>gi|167622749|ref|YP_001673043.1| peptide chain release factor 2 [Shewanella halifaxensis HAW-EB4]
 gi|167352771|gb|ABZ75384.1| peptide chain release factor 2 [Shewanella halifaxensis HAW-EB4]
          Length = 293

 Score =  220 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 156/291 (53%), Positives = 207/291 (71%), Gaps = 1/291 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+EEDD     + +  LQ ++  +E  +F  + SG  D++D YL++
Sbjct: 1   MDSGLEDIEGLLELAVEEDDEETFNDAAAELQDLERRLEELEFRRMFSGPHDASDCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G+GGTE+QDWANM+LRM+ RW +   +K E +E+  G+ AGIK AT+   G  A+G L
Sbjct: 61  QSGSGGTEAQDWANMVLRMFLRWGDAHDYKPELIEVTGGDVAGIKGATIKFTGEYAFGSL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS+ +RHTSF S++VYP +DDSIEI+I+ SD RIDTYRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSSGKRHTSFCSVFVYPEIDDSIEIDINPSDLRIDTYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SA+RITH+PT  VVQCQ +RSQHKN+  A   L+AKLYELE+ K+       E 
Sbjct: 181 HVNKTESAIRITHLPTNTVVQCQNDRSQHKNRDAAMKQLKAKLYELEMLKQNADKQAAED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 241 AKSDIGWGSQIRSYVLDD-ARIKDLRTGVENRNTQSVLDGDLDKFIEASLK 290


>gi|78358024|ref|YP_389473.1| peptide chain release factor 1 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|119361534|sp|Q30X18|RF1_DESDG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78220429|gb|ABB39778.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 357

 Score =  220 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 102/350 (29%), Positives = 168/350 (48%), Gaps = 11/350 (3%)

Query: 13  LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN-- 69
           +F   ++  ++   L  +   P ++ +    + L +    L   +   +  +    +   
Sbjct: 1   MFAKLEHLERQFEDLEQQLSSPEVFGDQERYRKLTKAHSDLKEIVEVFRVYRQLNEELAG 60

Query: 70  -LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              +L  +  E      +E     +R+       +   L     D  +  LE+ AG GG 
Sbjct: 61  NKEMLRDSDPEIQAMAREEIDAIEKRLPEMEHELKLLLLPKDPLDEKNVVLEIRAGTGGE 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY R+AE   ++ E L   + +  G K    LI G   Y  +K E G H
Sbjct: 121 EAALFAADLFRMYLRYAEDMGWRVEVLSSSETDSGGFKEIIGLISGDKVYSRMKFESGTH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS +++ V P   D +E+++   D R D YR+SG GGQ VNTTDS
Sbjct: 181 RVQRVPATETQGRIHTSAATVAVMP-EADEVELDMKPEDLRFDVYRSSGPGGQSVNTTDS 239

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+THIPTG+ V CQ E+SQHKNKA+   +L ++L + +  KR E   + E  ++ +G 
Sbjct: 240 AVRVTHIPTGITVACQDEKSQHKNKAKGLKILASRLLQAQEDKRHEE--LAEQRRSLVGT 297

Query: 309 GR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G    +IR+Y   P   + D R N+        ++G + D + A +   +
Sbjct: 298 GDRSGRIRTYNF-PQGRITDHRINLTLYKLDAFMEGQIGDMLDALITHAQ 346


>gi|254382315|ref|ZP_04997675.1| peptide chain release factor 1 [Streptomyces sp. Mg1]
 gi|194341220|gb|EDX22186.1| peptide chain release factor 1 [Streptomyces sp. Mg1]
          Length = 359

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 118/350 (33%), Positives = 176/350 (50%), Gaps = 16/350 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +  +   + L  K  DP +  +   A+ L +    L   ++  +  +    D   
Sbjct: 1   MFEAVEELIGEHADLEKKLADPSVHSDQANARKLNKRYAELTPIVATFRAWKQSAEDIET 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E     DD     E  +   + +   E  +   +    +D  D  LEV AGAGG ES 
Sbjct: 61  AKEF--AADDPDFAAEVKELSAQREELTEKLRLLLVPRDPSDDKDVLLEVKAGAGGDESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG----------PNAYGWL 181
            +A  LLRMY R+AE+  +KTE ++  + E  G K   + ++              +  L
Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVSVRTKGGNGATEPGQGVWARL 178

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   +S  R HTS + + V P   + +E+EI+ +D RID YR+SG GGQ
Sbjct: 179 KYEGGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEVEVEINMNDLRIDVYRSSGPGGQ 237

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITHIPTGVV  CQ E+SQ +NK QA  +LR++L     +  E+ A+    
Sbjct: 238 SVNTTDSAVRITHIPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEAAEQEASDVRR 297

Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           S+   +    +IR+Y   P   + D RT  +  +   VLDGDLD  ++A 
Sbjct: 298 SQVRSVDRSEKIRTYNY-PENRISDHRTGFKAYNLDQVLDGDLDSIIQAC 346


>gi|56965632|ref|YP_177366.1| peptide chain release factor 1 [Bacillus clausii KSM-K16]
 gi|61214582|sp|Q5WB55|RF1_BACSK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56911878|dbj|BAD66405.1| peptide chain release factor 1 [Bacillus clausii KSM-K16]
          Length = 356

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 110/347 (31%), Positives = 173/347 (49%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R  +LN +  DP++  N  + +   +E+  ++  +   ++ +           +
Sbjct: 5   LQAVEDRYEYLNEQLSDPNVISNATKLREYSKEQAQIEETVQTYRQYKQVTEQLADAKAM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E+ D  + Q   + L  +       +       L     D  +  +E+   AGG E+Q
Sbjct: 65  LEEKLDDDMYQMVKEELDELSERKAELEERLKILLLPKDPNDDKNVIVEIRGAAGGDEAQ 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MY R+AE + +KTE +E H  E  G K    ++ G  AY  LK E G HR+ 
Sbjct: 125 LFAADLYKMYHRYAEMQGWKTEVIEAHATELGGYKEIIFMVNGSGAYSKLKYENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EI+I E D R+DT+ +SG GGQ VNTT SAVR
Sbjct: 185 RVPQTESGGRIHTSTATVAVLP-EAEEVEIDIHEKDIRVDTFASSGPGGQSVNTTMSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PT  VV CQ E+SQ KNK +A  +LRA++++    ++E  A   ES K  +G G  
Sbjct: 244 LTHLPTNTVVSCQDEKSQIKNKEKAMKVLRARIFDKV--QQEAQAEYAESRKLAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       VL G LD+ + A +   +
Sbjct: 302 SERIRTYNF-PQSRVTDHRIGLTLQKLEQVLQGKLDEIIDALVVADQ 347


>gi|116748170|ref|YP_844857.1| peptide chain release factor 2 [Syntrophobacter fumaroxidans MPOB]
 gi|116697234|gb|ABK16422.1| bacterial peptide chain release factor 2 (bRF-2) [Syntrophobacter
           fumaroxidans MPOB]
          Length = 312

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 156/298 (52%), Positives = 216/298 (72%)

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
            +   + + + L DN ++LE+ALEE+D  +L++       ++ E+   + + LL  E D 
Sbjct: 2   IVENWQRLSEELRDNELMLEMALEEEDREVLKDVHRKALSLQKELRTVELQQLLGEENDD 61

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
            +A + ++AGAGGTE+QDWA MLLRMY RW EK+ F  + +++ +GEEAGIKS T  + G
Sbjct: 62  KNAIVSINAGAGGTEAQDWAEMLLRMYLRWCEKKSFTVQMVDMLEGEEAGIKSGTFTVSG 121

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
            +AYG LKGE G+HRLVRISP+D++ RRHTSF+++ V P VD+ IE+EI ++D RIDTYR
Sbjct: 122 SHAYGLLKGESGIHRLVRISPFDASGRRHTSFAAVLVIPEVDEKIEVEIKQADLRIDTYR 181

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASGAGGQHVN T SAVRITH+PTG+VVQCQ E+SQH+N+  A  +LRA+LYE E + ++E
Sbjct: 182 ASGAGGQHVNKTSSAVRITHLPTGIVVQCQNEKSQHRNRDIALKILRARLYEREKRAQQE 241

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
                  S  +I WG QIRSYVLQPY+++KD RT+IEK +   VLDG++DDF++  L 
Sbjct: 242 KLQEAHDSLDDIAWGNQIRSYVLQPYRLIKDHRTSIEKGNVEGVLDGEIDDFIEGYLM 299


>gi|297623932|ref|YP_003705366.1| hypothetical protein Trad_1705 [Truepera radiovictrix DSM 17093]
 gi|297165112|gb|ADI14823.1| conserved hypothetical protein [Truepera radiovictrix DSM 17093]
          Length = 377

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 144/358 (40%), Positives = 203/358 (56%), Gaps = 9/358 (2%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +++ QL+ L G  D      RL+ L  +  DP LW +   A+ L +E   L   +     
Sbjct: 14  EMTAQLHALRGYLDLARKEARLAELEPQLSDPKLWDDPEAARTLTQEAARLRRVLETFHR 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L     L ELA   ++             ++  ++    E+L SG  D   A L +
Sbjct: 74  LEGDLEGLRELQELATTPEEQQD---LEAERAALQRTLDALYRETLFSGPHDDRAAILTI 130

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA--GIKSATLLIKGPNAYG 179
             GAGGTES DWA ML RMY R+AE++ F+ E L+    + A  GI  A L+I+G  AYG
Sbjct: 131 KPGAGGTESSDWAGMLWRMYRRFAERQGFEVELLDATPSDAAPNGIDYAQLIIRGERAYG 190

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            L+ E GVHRLVR+SP+D+  RRHTSF+S+ V P +DD++EI I   D R+D YR+SG G
Sbjct: 191 LLQVESGVHRLVRVSPFDAQGRRHTSFASVEVMPEIDDAVEITIDPKDVRVDVYRSSGPG 250

Query: 240 GQHVNTTDSAVRITHI---PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GQ VNTTDSAVR+ +    P  +VV CQ  +SQ KN+ +A  +LR++L+E E ++R E  
Sbjct: 251 GQSVNTTDSAVRVVYKGGTPEEIVVTCQDGKSQIKNREKAMTVLRSRLFEREERRRLEEQ 310

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                 +  I WG QIRSYVL   + VKD RT   +  P DVLDGD++  + + L  +
Sbjct: 311 MRARGEQKAIEWGSQIRSYVLDK-RYVKDHRTGEMRHDPDDVLDGDIEGLIWSGLEHR 367


>gi|148359876|ref|YP_001251083.1| peptide chain release factor 1 [Legionella pneumophila str. Corby]
 gi|296107926|ref|YP_003619627.1| peptide chain release factor [Legionella pneumophila 2300/99 Alcoy]
 gi|166223567|sp|A5IED7|RF1_LEGPC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|148281649|gb|ABQ55737.1| peptide chain release factor 1 (RF-1) [Legionella pneumophila str.
           Corby]
 gi|295649828|gb|ADG25675.1| peptide chain release factor [Legionella pneumophila 2300/99 Alcoy]
          Length = 362

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 114/343 (33%), Positives = 175/343 (51%), Gaps = 9/343 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
                 ++R   +     +  +  +  + K L +E   L+      +   +   +   L 
Sbjct: 7   LKLQQMLERYEEVGRLLSEASIIADQNQFKSLSKEYAQLEPVSQCYESYLEAKNNLDSLN 66

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESL---LSGEADSNDAYLEVHAGAGGTES 130
           EL   +D         +     K   E  +            D  + YLEV AG GG E+
Sbjct: 67  ELLESDDKDLATMAEEEIDIVKKQIEELDEQLQWHLIPKDPDDERNIYLEVRAGTGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY+R+AE + ++ E +    GE  G K     I G   Y  LK E G HR+
Sbjct: 127 AIFAGDLFRMYSRYAESQGWQIELISASHGEHGGYKEIIAKISGQAVYSQLKFESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ + P VD+  +I+I+  D RIDTYR+SGAGGQHVN TDSA+
Sbjct: 187 QRVPETESQGRVHTSACTVAIMPEVDEINDIQINPDDLRIDTYRSSGAGGQHVNKTDSAI 246

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTGVVV+CQ ERSQHKN+A+A ++L+ +L + E+ K+++     ++ K+ +G G 
Sbjct: 247 RITHIPTGVVVECQDERSQHKNRAKAMSLLKTRLLDAEVSKQKQEQ--AQTRKSLVGTGD 304

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              +IR+Y   P   + D R N+     SD+++G+L   +   
Sbjct: 305 RSERIRTYNF-PQGRLTDHRINLTIYQLSDIMEGNLSLVIDPL 346


>gi|222034586|emb|CAP77328.1| Peptide chain release factor 2 [Escherichia coli LF82]
          Length = 293

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 169/292 (57%), Positives = 208/292 (71%), Gaps = 1/292 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++
Sbjct: 1   MKQGLEDVSGLLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL
Sbjct: 61  QAGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E 
Sbjct: 181 HVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 241 NKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|90961566|ref|YP_535482.1| peptide chain release factor 1 [Lactobacillus salivarius UCC118]
 gi|119361553|sp|Q1WUD6|RF1_LACS1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|90820760|gb|ABD99399.1| Bacterial Peptide Chain Release Factor 1 [Lactobacillus salivarius
           UCC118]
          Length = 360

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 106/352 (30%), Positives = 182/352 (51%), Gaps = 12/352 (3%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLC 67
            LFD       R   L     DP +  +      L +E   L   +    + +    ++ 
Sbjct: 3   KLFDRLQMLEDRYEELGELLSDPDVISDTKRFTKLSKEMADLRETVEKYNKYKEVTQQIS 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
           D+  +L   L+++  S+++E   N +  K    E  +   L     D  +  +E+   AG
Sbjct: 63  DDEEMLSDGLDDEMASLVKEELSNAKNEKVKLEEEIKILLLPKDPNDDKNIIMEIRGAAG 122

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L  MY+++AE++ +  E ++ +  E  G K   L+I G + +  LK E G
Sbjct: 123 GDEASLFAADLFSMYSKYAERQGWSIEVIDKNVTEVGGFKEIALIINGNSVWSKLKYESG 182

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ RI   +S  R HTS +++ V P  ++ +EIE+   D R+D YR+SGAGGQH+N T
Sbjct: 183 AHRVQRIPVTESAGRVHTSTATVVVMP-EEEDVEIELDPKDIRVDVYRSSGAGGQHINKT 241

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+TH+PTG+VV  Q +RSQ +N+ +A  +L+A++Y+   Q+  E +    + K+ +
Sbjct: 242 SSAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDYYAQQ--EQSEYDANRKSAV 299

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       +++G+L+D + A +  ++
Sbjct: 300 GTGDRSERIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELEDVIDALVLFEQ 350


>gi|333000723|gb|EGK20298.1| peptide chain release factor 2 [Shigella flexneri K-272]
 gi|333015221|gb|EGK34563.1| peptide chain release factor 2 [Shigella flexneri K-227]
          Length = 293

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 169/292 (57%), Positives = 208/292 (71%), Gaps = 1/292 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++
Sbjct: 1   MKQGLEDVSGLLELAVEADDEETFNEAVAELNALEEKLAQLEFRRMFSGEYDSADCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL
Sbjct: 61  QAGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E 
Sbjct: 181 HVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 241 NKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|116493078|ref|YP_804813.1| peptide chain release factor 1 [Pediococcus pentosaceus ATCC 25745]
 gi|116103228|gb|ABJ68371.1| bacterial peptide chain release factor 1 (bRF-1) [Pediococcus
           pentosaceus ATCC 25745]
          Length = 359

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 108/347 (31%), Positives = 175/347 (50%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---DNLIL 72
                 R   L+    DP +  +    + L +E   +   +   +E +  +    +N  L
Sbjct: 7   VQAVADRYEELSELLADPEVLGDSQRYQELSKEEGEIRETVEKYREYRKTVDAIAENEEL 66

Query: 73  LELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
               L+ +  S+++     L+  K    E  +   L +   D  +  +E+H  AGG E+ 
Sbjct: 67  QREKLDPEMDSLVKAELAELRETKATLEEEIKILMLPTDPNDDKNIIMEIHGAAGGDEAS 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MYTR+AE + +K E ++ +  +  G K   L+I G   Y  LK E G HR+ 
Sbjct: 127 LFAADLYNMYTRYAETQGWKVEVVDENATDVGGFKEIVLMISGNKVYSKLKYENGAHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS S++ V P   + ++IEI + D R D YR+SGAGGQH+N T SAVR
Sbjct: 187 RVPVTESAGRVHTSTSTVGVMP-EAEDVDIEIDQKDIRTDVYRSSGAGGQHINKTSSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q ERSQ +N+ +A  +L+A++Y+    + +E        K+ +G G  
Sbjct: 246 MTHLPTGIVVAMQDERSQQQNREKAMRILKARVYDYY--QTQEEDAYNAERKSAVGTGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       V++G+LDD + A +   +
Sbjct: 304 SERIRTYNF-PQNRVTDHRIGLTLNKLDRVMNGELDDIIDALILDDQ 349


>gi|300214391|gb|ADJ78807.1| Peptide chain release factor 1 (RF-1) [Lactobacillus salivarius
           CECT 5713]
          Length = 360

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 106/352 (30%), Positives = 183/352 (51%), Gaps = 12/352 (3%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLC 67
            LFD       R   L     DP +  +      L +E   L   +    + +    ++ 
Sbjct: 3   KLFDRLQMLEDRYEELGELLSDPDVISDTKRFTKLSKEMADLRETVEKYNKYKEVTQQIS 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
           D+  +L   L+++  S+++E   N++  K    E  +   L     D  +  +E+   AG
Sbjct: 63  DDEEMLSDGLDDEMASLVKEELSNVKDEKVKLEEEIKILLLPKDPNDDKNIIMEIRGAAG 122

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L  MY+++AE++ +  E ++ +  E  G K   L+I G + +  LK E G
Sbjct: 123 GDEASLFAADLFSMYSKYAERQGWSIEVIDKNVTEVGGFKEIALIINGNSVWSKLKYESG 182

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ RI   +S  R HTS +++ V P  ++ +EIE+   D R+D YR+SGAGGQH+N T
Sbjct: 183 AHRVQRIPVTESAGRVHTSTATVVVMP-EEEDVEIELDPKDIRVDVYRSSGAGGQHINKT 241

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+TH+PTG+VV  Q +RSQ +N+ +A  +L+A++Y+   Q+  E +    + K+ +
Sbjct: 242 SSAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDYYAQQ--EQSEYDANRKSAV 299

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       +++G+L+D + A +  ++
Sbjct: 300 GTGDRSERIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELEDVIDALVLFEQ 350


>gi|268610024|ref|ZP_06143751.1| peptide chain release factor 1 [Ruminococcus flavefaciens FD-1]
          Length = 357

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 114/352 (32%), Positives = 184/352 (52%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+       + + ++ K   P +  +      LM+E +++   I   +E +     N  
Sbjct: 1   MFEKLAAMETKYNEISDKLSQPDIVSDNKLYTQLMKEYKNMTPIIEKYREYKSAQAQNEE 60

Query: 72  LLELALEEDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
             EL          +E       ++ + ++   +  +   L     D  +  +E+  GAG
Sbjct: 61  AKELLDGGGLDRDFKEMVQAELEESKEAMENVTQELKILLLPKDPNDDKNVIIEIRGGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +AN L RMYT +AE R +K E L  +  E  G K  +  I+G  AY  LK E G
Sbjct: 121 GEEASLFANSLYRMYTMYAEARGWKQEVLSANPTELGGFKEISFSIEGEGAYSRLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS  ++ V  V  D +E+EI+ +D +ID +RASGAGGQH+N T
Sbjct: 181 VHRVQRVPETESQGRIHTSTVTVAVL-VEADDVELEINPTDLKIDYFRASGAGGQHINKT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SAVRIT++PT VVV+CQ ERSQHKNK +A  +LR+++YE   Q++ +   I    ++++
Sbjct: 240 ESAVRITYLPTNVVVECQDERSQHKNKDKAMKILRSRIYEAMQQEQND--KIASERRSQV 297

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   + D R  +      D+L+G+LD+   +     +
Sbjct: 298 GTGDRSERIRTYNY-PQGRLTDHRIGLTIYRLEDILNGNLDEVFDSLATADQ 348


>gi|303247215|ref|ZP_07333489.1| peptide chain release factor 2 [Desulfovibrio fructosovorans JJ]
 gi|302491374|gb|EFL51262.1| peptide chain release factor 2 [Desulfovibrio fructosovorans JJ]
          Length = 307

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 144/300 (48%), Positives = 199/300 (66%), Gaps = 1/300 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L + I   +++     D    L LA ++    +L   ++ +  +  E+   +  +    E
Sbjct: 2   LTSRIEDGEKLLAARTDLDEWLSLAKDDGSPEVLDALAEQIATLDGELADAELAAFFRSE 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            +  DA LE+H GAGGTE+QDWA MLLRMY RWAE+++F  + L+   G+EAG+KS TL 
Sbjct: 62  DNV-DAILEIHPGAGGTEAQDWAEMLLRMYRRWAERKEFGVKILDYLPGDEAGLKSVTLQ 120

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
             GP AYG L  E+G+HRL+RISP+DS+ RRHTSF+S+ VYP     I+I+I E D RID
Sbjct: 121 FSGPYAYGMLAAEKGIHRLIRISPFDSSGRRHTSFASVDVYPDAGVDIDIDIKEDDLRID 180

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            +RASG GGQHVN T SA+RITH+PTG+VVQCQ E+SQH+N+  A  +L+A+LY+LEL+K
Sbjct: 181 VFRASGPGGQHVNKTSSAIRITHLPTGIVVQCQNEKSQHRNRETAMKVLKARLYDLELKK 240

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +        SK  IG+G QIR+Y +QPY++VKD RT ++      VLDGDLD F++  L
Sbjct: 241 LQAEKQESYESKNAIGFGSQIRTYTMQPYRLVKDHRTGVDAGDVEAVLDGDLDKFIRGYL 300


>gi|229917064|ref|YP_002885710.1| peptide chain release factor 1 [Exiguobacterium sp. AT1b]
 gi|259585222|sp|C4KYV2|RF1_EXISA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229468493|gb|ACQ70265.1| peptide chain release factor 1 [Exiguobacterium sp. AT1b]
          Length = 356

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 109/352 (30%), Positives = 176/352 (50%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD       R   LN    DP +  +  + +   +E+  L+  +   ++ ++       
Sbjct: 1   MFDRLSVLEDRYMQLNEMLADPEVLSDSTKLRQYSKEQAQLEETVQMYRQYKETSQAFKE 60

Query: 72  LLELALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
              +  +    + ++E +          +K      +   L     D  +  +EV   AG
Sbjct: 61  AKSMLEDRTLDAEMRELAKEEMNLLEPEVKELEAKLRILLLPKDPNDEKNVIVEVRGAAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L +MYTR+AE++ +K E ++ +  E  G K  T +I G  AY  LK E G
Sbjct: 121 GDEAALFAGDLYKMYTRFAERQNWKVELIDANYTELGGFKEVTFMINGAGAYSKLKFENG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P   + +E+ I   D R+DT+ +SG GGQ VNTT
Sbjct: 181 AHRVQRVPSTESGGRIHTSTATVAVLP-EAEDVEVHIDMKDVRVDTFTSSGPGGQSVNTT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+THIP+G+VV CQ E+SQHKNK +A  +LRA+LY+    +  E   +    K+ +
Sbjct: 240 QSAVRLTHIPSGLVVSCQDEKSQHKNKDKAMKVLRARLYDKMQSEHMEE--LSAQRKSAV 297

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       VL G+L+D + A +  ++
Sbjct: 298 GTGDRSERIRTYNF-PQSRVTDHRIGLTLQKLDRVLAGELEDIIDALIMDEQ 348


>gi|238792836|ref|ZP_04636467.1| Peptide chain release factor 2 [Yersinia intermedia ATCC 29909]
 gi|238727944|gb|EEQ19467.1| Peptide chain release factor 2 [Yersinia intermedia ATCC 29909]
          Length = 289

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 165/288 (57%), Positives = 207/288 (71%), Gaps = 1/288 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + D   LLELA+E DD     E    L  +  ++   +F  + SGE DS + YL++ AG+
Sbjct: 1   MEDVSGLLELAIEADDEETFNEAIAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQAGS 60

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWA+MLLRMY RWAE + FKTE +E  DG+ AG+KSAT+ I G  A+GWL+ E 
Sbjct: 61  GGTEAQDWASMLLRMYLRWAESKGFKTEIIEESDGDVAGLKSATIKIIGDYAFGWLRTET 120

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN 
Sbjct: 121 GVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNK 180

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVRITH+PT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E +K++
Sbjct: 181 TESAVRITHLPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDNKSD 240

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 241 IGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 287


>gi|301384023|ref|ZP_07232441.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. tomato Max13]
 gi|302058729|ref|ZP_07250270.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. tomato K40]
 gi|331016328|gb|EGH96384.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 304

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 166/302 (54%), Positives = 220/302 (72%), Gaps = 1/302 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L   +  + E+   L D   LL ++ EE+D + + + +  ++R++  +E  +F  + SGE
Sbjct: 2   LAQIVETLDEMSSGLVDAKDLLLMSAEEEDQAAVDDVAAEVERLRASLEKLEFRRMFSGE 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK AT+ 
Sbjct: 62  MDPNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVH 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ SD RID
Sbjct: 122 IKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRID 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRA+LYE E+QK
Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R   +   E +K++IGWG QIRSYVL     +KDLRTNIE++    VLDGD+D+++ A+L
Sbjct: 242 RNAASQALEDTKSDIGWGHQIRSYVLD-ASRIKDLRTNIERSDCDKVLDGDIDEYLIASL 300

Query: 352 AI 353
             
Sbjct: 301 KQ 302


>gi|86132182|ref|ZP_01050777.1| peptide chain release factor 2 [Dokdonia donghaensis MED134]
 gi|85817101|gb|EAQ38284.1| peptide chain release factor 2 [Dokdonia donghaensis MED134]
          Length = 316

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 146/308 (47%), Positives = 208/308 (67%), Gaps = 2/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+  +     ++  +E Q  + D  +L E A E +      +           +E  +F 
Sbjct: 1   MKTLRSKKKWVTDYEEAQTFVEDLEVLYEFAKEGEAPEENVQARYEKAA--SFIEDIEFR 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LS E D     L++ AGAGGTES DWA+ML+RMY  +AEK+ +K + L   +G+ AGI
Sbjct: 59  NMLSEEGDELSCVLQITAGAGGTESCDWASMLMRMYLMYAEKQGWKVKELNFQEGDVAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ +L I+G  A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDSIEIE++ 
Sbjct: 119 KTVSLEIEGEFAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIELNP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D  I T R+SGAGGQ+VN  ++ V++TH PTG+ + C   RSQH N+A+A  MLR++LY
Sbjct: 179 ADYDIVTARSSGAGGQNVNKVETKVQLTHHPTGIQISCSDSRSQHDNRAKALQMLRSQLY 238

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           ELEL+K+ E  N  E+ K  I WG QIR+YVL PY++VKD+RT +E  +   VLDG++D 
Sbjct: 239 ELELRKQMEARNAIEADKKAIEWGSQIRNYVLHPYKLVKDVRTAVETGNTDAVLDGNIDL 298

Query: 346 FMKATLAI 353
           F+K  L +
Sbjct: 299 FLKGYLMM 306


>gi|225848358|ref|YP_002728521.1| peptide chain release factor 1 [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225644346|gb|ACN99396.1| peptide chain release factor 1 [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 360

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 123/352 (34%), Positives = 186/352 (52%), Gaps = 12/352 (3%)

Query: 11  GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
             + D   N  +++  L     DP + ++  + + + +E + L   +S   + +      
Sbjct: 3   KKILDQIKNIEEKVKKLEQLLTDPEVLKDPSKIQSIAKEHKDLSEILSLYNQYEKVNFQI 62

Query: 70  LILLELA----LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
             + +L      ++       E  +  Q +    +  +   L     D  +  LE+  G 
Sbjct: 63  EEVKQLINSTTEDDLRELAELELEELKQELSELEKKIELAFLPKDPNDEKNVILEIRQGT 122

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  L RMY R+AE+  +KTE L IH  +  G+K    LIKG  AY  LK E 
Sbjct: 123 GGEEAALFAAELFRMYQRYAERHGWKTEVLSIHPTDRGGVKEVIALIKGKGAYSRLKYES 182

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S+ R HTS +++ V P   + ++IEI   D +I+T RA GAGGQHVNT
Sbjct: 183 GVHRVQRVPETESSGRIHTSTATVAVLP-EAEEVDIEIKPEDLKIETMRAGGAGGQHVNT 241

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PTG+VVQCQ ERSQ +NK +A  +LRA+L +     R E   I +  K +
Sbjct: 242 TDSAVRITHLPTGIVVQCQDERSQLQNKLKAMQILRARLKDYYD--RLEREKIAKERKEQ 299

Query: 306 IGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +G G +   IR+Y   P   V D R N      +D+LDGDLD+ ++  +A +
Sbjct: 300 VGTGERSEKIRTYNF-PQNRVTDHRVNYTSYRINDILDGDLDEIIEVLIAKE 350


>gi|239817175|ref|YP_002946085.1| peptide chain release factor 1 [Variovorax paradoxus S110]
 gi|259585259|sp|C5CXW3|RF1_VARPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|239803752|gb|ACS20819.1| peptide chain release factor 1 [Variovorax paradoxus S110]
          Length = 362

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 116/343 (33%), Positives = 178/343 (51%), Gaps = 7/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QRL  L+       +  ++ + + + RE   +       +  + R  D     E+
Sbjct: 9   LERYAQRLGELDFLLSREDIMSDMAQYRTISREHAEITQIAGRYERYKQREADIAGAAEM 68

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E     Q       E  Q   L     D+ +A+LE+ AG GG ES  +A
Sbjct: 69  LEDPDMAEMAREEIAAAQAELVQLEEELQRLLLPKDPDDARNAFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+ E+  ++ E +   + E  G K   + I G + +G L+ E G HR+ R+ 
Sbjct: 129 GDLLRMYTRYCERAGWRCEVVSESESELGGYKEVVIRIAGNDVFGRLRFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V    D+++ ++I+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 ATETQGRIHTSACTVAVLAEPDETVAVQINPADLRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+V +CQ +RSQH+NKA+A  +L A++   E  + E  A      K  IG G    +
Sbjct: 249 IPTGIVAECQDDRSQHRNKAKALQVLSARI--QEKDRSERAAKDAAMRKGLIGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IR+Y   P   + D R N+       +++GDL D + A  A +
Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYKLQAIMEGDLGDVLDALRAAR 348


>gi|312884085|ref|ZP_07743798.1| peptide chain release factor 1 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368255|gb|EFP95794.1| peptide chain release factor 1 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 362

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 112/346 (32%), Positives = 181/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  +  + + L +E   L+      +  Q    D     E+
Sbjct: 9   LETLVERYEEVQHLLGDPEIIGDQDKFRSLSKEYSQLEEVTKCFQAFQQAQEDLTAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYLEVHAGAGGTESQD 132
           A EED+        +  Q  +      +      L     D  + +LE+ AGAGG E+  
Sbjct: 69  AKEEDEEMREMAQEEIAQSKQAIENLSEELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AEK+ ++ E +  ++ E  G K     + G  AYG +K E G HR+ R
Sbjct: 129 FAGDLFRMYSKFAEKKGWRIEVMSSNEAEHGGYKEMIAKVSGEGAYGIMKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ +   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RI
Sbjct: 189 VPATESQGRVHTSACTVAIMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG VV+CQ ERSQHKNKA+A  +L A++  ++ ++ +  A   ++ +  +G G   
Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARI--IQAEEAKRAAEESDTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+     ++V++GD+   +   L   +
Sbjct: 307 DRIRTYNY-PQGRVSDHRINLTLYRLNEVMEGDVSSLIDPVLQEHQ 351


>gi|160900908|ref|YP_001566490.1| peptide chain release factor 1 [Delftia acidovorans SPH-1]
 gi|238687199|sp|A9BP60|RF1_DELAS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|160366492|gb|ABX38105.1| peptide chain release factor 1 [Delftia acidovorans SPH-1]
          Length = 360

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 176/344 (51%), Gaps = 9/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QRL  LN       +  ++ + + + RE   +          + R  D     ++
Sbjct: 9   LERYAQRLEELNFLLSREDIMGDMKQYRAISREHADVTAIAGRYARHRQREADLAAAQDM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTESQDW 133
             + D  + + +        +L     + + LL  +      +AYLE+ AG GG ES  +
Sbjct: 69  LSDPD-MADMAQEEIASAEAELVQLEDELQRLLLPKDPDDARNAYLEIRAGTGGDESALF 127

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMYTR  +   +K E +  ++ E  G K   L ++G + YG L+ E G HR+ R+
Sbjct: 128 AGDLARMYTRHCDAVGWKVEIMSANESELGGYKEVVLRVEGTDVYGRLRFESGGHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS  ++ V P  D++  I ++ +D RIDT+RASGAGGQH+N TDSAVR+ 
Sbjct: 188 PATETQGRIHTSACTVAVMPEPDETQAITLNPADLRIDTFRASGAGGQHINKTDSAVRVV 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG+V +CQ  RSQH NKA+A  +L+A+L E E  +RE  A      K  IG G    
Sbjct: 248 HLPTGIVAECQDGRSQHSNKAKALQVLQARLQEKERSERE--AKEAALRKGLIGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   + D R N+       V++GDL D + A  A +
Sbjct: 306 RIRTYNF-PQGRLTDHRINLTIYKLLAVMEGDLGDVLDALQAAR 348


>gi|120610527|ref|YP_970205.1| peptide chain release factor 2 [Acidovorax citrulli AAC00-1]
 gi|120588991|gb|ABM32431.1| bacterial peptide chain release factor 2 (bRF-2) [Acidovorax
           citrulli AAC00-1]
          Length = 300

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 152/298 (51%), Positives = 208/298 (69%), Gaps = 1/298 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  + ++   L DN  L E++ EE D + L        +++  +E  +F  + S EAD  
Sbjct: 2   VVTLDKLTRELADNAELYEMSKEEGDEAGLLTIEAEAGKLRPLIEELEFRRMFSNEADPL 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           + ++++ AGAGGTE+ DWA MLLR Y ++AE++ FK    +   G+ AGIKSAT+ I+G 
Sbjct: 62  NCFVDIQAGAGGTEACDWAGMLLRQYLKYAERKGFKATVEDETPGDVAGIKSATIKIEGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYG L+ E GVHRLVR SP+DS+  RHTSF+S++VYP +DDSIEI I+ +D R DT+RA
Sbjct: 122 YAYGLLRTETGVHRLVRKSPFDSSGGRHTSFASLFVYPEIDDSIEININPADVRTDTFRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQH+N TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+ E++KR E 
Sbjct: 182 SGAGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKRMEE 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
               E +KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 242 QQKLEDTKTDVGWGHQIRSYVLD-NSRIKDLRTNVEVSATQKVLDGDLDVFIEASLKQ 298


>gi|82545486|ref|YP_409433.1| peptide chain release factor RF-2 [Shigella boydii Sb227]
 gi|82778343|ref|YP_404692.1| peptide chain release factor RF-2 [Shigella dysenteriae Sd197]
 gi|110643039|ref|YP_670769.1| peptide chain release factor 2 [Escherichia coli 536]
 gi|117625122|ref|YP_854110.1| peptide chain release factor 2 [Escherichia coli APEC O1]
 gi|195936508|ref|ZP_03081890.1| hypothetical protein EscherichcoliO157_08602 [Escherichia coli
           O157:H7 str. EC4024]
 gi|209920345|ref|YP_002294429.1| peptide chain release factor 2 [Escherichia coli SE11]
 gi|217327359|ref|ZP_03443442.1| peptide chain release factor 2 [Escherichia coli O157:H7 str.
           TW14588]
 gi|227888439|ref|ZP_04006244.1| peptide chain release factor 2 [Escherichia coli 83972]
 gi|237706466|ref|ZP_04536947.1| peptide chain release factor RF-2 [Escherichia sp. 3_2_53FAA]
 gi|254037934|ref|ZP_04871992.1| peptide chain release factor RF-2 [Escherichia sp. 1_1_43]
 gi|256019311|ref|ZP_05433176.1| peptide chain release factor 2 [Shigella sp. D9]
 gi|256024599|ref|ZP_05438464.1| peptide chain release factor 2 [Escherichia sp. 4_1_40B]
 gi|261226204|ref|ZP_05940485.1| peptide chain release factor 2 [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261256541|ref|ZP_05949074.1| peptide chain release factor RF-2 [Escherichia coli O157:H7 str.
           FRIK966]
 gi|293406389|ref|ZP_06650315.1| peptide chain release factor 2 [Escherichia coli FVEC1412]
 gi|293412249|ref|ZP_06654972.1| peptide chain release factor 2 [Escherichia coli B354]
 gi|293416144|ref|ZP_06658784.1| peptide chain release factor 2 [Escherichia coli B185]
 gi|298382125|ref|ZP_06991722.1| peptide chain release factor 2 [Escherichia coli FVEC1302]
 gi|300815658|ref|ZP_07095882.1| peptide chain release factor 2 [Escherichia coli MS 107-1]
 gi|300820694|ref|ZP_07100845.1| peptide chain release factor 2 [Escherichia coli MS 119-7]
 gi|300896214|ref|ZP_07114763.1| peptide chain release factor 2 [Escherichia coli MS 198-1]
 gi|300906560|ref|ZP_07124251.1| peptide chain release factor 2 [Escherichia coli MS 84-1]
 gi|300921222|ref|ZP_07137595.1| peptide chain release factor 2 [Escherichia coli MS 115-1]
 gi|300925129|ref|ZP_07141043.1| peptide chain release factor 2 [Escherichia coli MS 182-1]
 gi|300928174|ref|ZP_07143716.1| peptide chain release factor 2 [Escherichia coli MS 187-1]
 gi|300936044|ref|ZP_07150992.1| peptide chain release factor 2 [Escherichia coli MS 21-1]
 gi|300947611|ref|ZP_07161783.1| peptide chain release factor 2 [Escherichia coli MS 116-1]
 gi|300954270|ref|ZP_07166733.1| peptide chain release factor 2 [Escherichia coli MS 175-1]
 gi|300980316|ref|ZP_07174970.1| peptide chain release factor 2 [Escherichia coli MS 45-1]
 gi|300995678|ref|ZP_07181206.1| peptide chain release factor 2 [Escherichia coli MS 200-1]
 gi|301027417|ref|ZP_07190754.1| peptide chain release factor 2 [Escherichia coli MS 69-1]
 gi|301027812|ref|ZP_07191117.1| peptide chain release factor 2 [Escherichia coli MS 196-1]
 gi|301049326|ref|ZP_07196296.1| peptide chain release factor 2 [Escherichia coli MS 185-1]
 gi|301303048|ref|ZP_07209175.1| peptide chain release factor 2 [Escherichia coli MS 124-1]
 gi|301327291|ref|ZP_07220547.1| peptide chain release factor 2 [Escherichia coli MS 78-1]
 gi|301643760|ref|ZP_07243798.1| peptide chain release factor 2 [Escherichia coli MS 146-1]
 gi|306812207|ref|ZP_07446405.1| peptide chain release factor 2 [Escherichia coli NC101]
 gi|307139578|ref|ZP_07498934.1| peptide chain release factor 2 [Escherichia coli H736]
 gi|307310490|ref|ZP_07590138.1| peptide chain release factor 2 [Escherichia coli W]
 gi|309785302|ref|ZP_07679933.1| peptide chain release factor 2 [Shigella dysenteriae 1617]
 gi|309793962|ref|ZP_07688387.1| peptide chain release factor 2 [Escherichia coli MS 145-7]
 gi|312964850|ref|ZP_07779090.1| peptide chain release factor 2 [Escherichia coli 2362-75]
 gi|312972868|ref|ZP_07787041.1| peptide chain release factor 2 [Escherichia coli 1827-70]
 gi|331643580|ref|ZP_08344711.1| peptide chain release factor 2 [Escherichia coli H736]
 gi|331648636|ref|ZP_08349724.1| peptide chain release factor 2 [Escherichia coli M605]
 gi|331654388|ref|ZP_08355388.1| peptide chain release factor 2 [Escherichia coli M718]
 gi|331659020|ref|ZP_08359962.1| peptide chain release factor 2 [Escherichia coli TA206]
 gi|331664463|ref|ZP_08365369.1| peptide chain release factor 2 [Escherichia coli TA143]
 gi|331669625|ref|ZP_08370471.1| peptide chain release factor 2 [Escherichia coli TA271]
 gi|331678877|ref|ZP_08379551.1| peptide chain release factor 2 [Escherichia coli H591]
 gi|331684516|ref|ZP_08385108.1| peptide chain release factor 2 [Escherichia coli H299]
 gi|81242491|gb|ABB63201.1| peptide chain release factor RF-2 [Shigella dysenteriae Sd197]
 gi|81246897|gb|ABB67605.1| peptide chain release factor RF-2 [Shigella boydii Sb227]
 gi|110344631|gb|ABG70868.1| peptide chain release factor 2 [Escherichia coli 536]
 gi|115514246|gb|ABJ02321.1| peptide chain release factor 2 [Escherichia coli APEC O1]
 gi|209913604|dbj|BAG78678.1| peptide chain release factor 2 [Escherichia coli SE11]
 gi|217319726|gb|EEC28151.1| peptide chain release factor 2 [Escherichia coli O157:H7 str.
           TW14588]
 gi|226839558|gb|EEH71579.1| peptide chain release factor RF-2 [Escherichia sp. 1_1_43]
 gi|226899506|gb|EEH85765.1| peptide chain release factor RF-2 [Escherichia sp. 3_2_53FAA]
 gi|227834708|gb|EEJ45174.1| peptide chain release factor 2 [Escherichia coli 83972]
 gi|281179896|dbj|BAI56226.1| peptide chain release factor 2 [Escherichia coli SE15]
 gi|281602223|gb|ADA75207.1| Peptide chain release factor 2 [Shigella flexneri 2002017]
 gi|284922839|emb|CBG35928.1| peptide chain release factor 2 (RF-2) [Escherichia coli 042]
 gi|291426395|gb|EFE99427.1| peptide chain release factor 2 [Escherichia coli FVEC1412]
 gi|291432333|gb|EFF05315.1| peptide chain release factor 2 [Escherichia coli B185]
 gi|291469020|gb|EFF11511.1| peptide chain release factor 2 [Escherichia coli B354]
 gi|298277265|gb|EFI18781.1| peptide chain release factor 2 [Escherichia coli FVEC1302]
 gi|299879074|gb|EFI87285.1| peptide chain release factor 2 [Escherichia coli MS 196-1]
 gi|300298925|gb|EFJ55310.1| peptide chain release factor 2 [Escherichia coli MS 185-1]
 gi|300304786|gb|EFJ59306.1| peptide chain release factor 2 [Escherichia coli MS 200-1]
 gi|300318731|gb|EFJ68515.1| peptide chain release factor 2 [Escherichia coli MS 175-1]
 gi|300359948|gb|EFJ75818.1| peptide chain release factor 2 [Escherichia coli MS 198-1]
 gi|300394925|gb|EFJ78463.1| peptide chain release factor 2 [Escherichia coli MS 69-1]
 gi|300401599|gb|EFJ85137.1| peptide chain release factor 2 [Escherichia coli MS 84-1]
 gi|300409324|gb|EFJ92862.1| peptide chain release factor 2 [Escherichia coli MS 45-1]
 gi|300411828|gb|EFJ95138.1| peptide chain release factor 2 [Escherichia coli MS 115-1]
 gi|300418731|gb|EFK02042.1| peptide chain release factor 2 [Escherichia coli MS 182-1]
 gi|300452808|gb|EFK16428.1| peptide chain release factor 2 [Escherichia coli MS 116-1]
 gi|300458836|gb|EFK22329.1| peptide chain release factor 2 [Escherichia coli MS 21-1]
 gi|300463814|gb|EFK27307.1| peptide chain release factor 2 [Escherichia coli MS 187-1]
 gi|300526958|gb|EFK48027.1| peptide chain release factor 2 [Escherichia coli MS 119-7]
 gi|300531587|gb|EFK52649.1| peptide chain release factor 2 [Escherichia coli MS 107-1]
 gi|300841712|gb|EFK69472.1| peptide chain release factor 2 [Escherichia coli MS 124-1]
 gi|300846154|gb|EFK73914.1| peptide chain release factor 2 [Escherichia coli MS 78-1]
 gi|301077859|gb|EFK92665.1| peptide chain release factor 2 [Escherichia coli MS 146-1]
 gi|305854245|gb|EFM54683.1| peptide chain release factor 2 [Escherichia coli NC101]
 gi|306909385|gb|EFN39880.1| peptide chain release factor 2 [Escherichia coli W]
 gi|307554867|gb|ADN47642.1| peptide chain release factor RF-2 [Escherichia coli ABU 83972]
 gi|307625536|gb|ADN69840.1| peptide chain release factor 2 [Escherichia coli UM146]
 gi|308122369|gb|EFO59631.1| peptide chain release factor 2 [Escherichia coli MS 145-7]
 gi|308926422|gb|EFP71898.1| peptide chain release factor 2 [Shigella dysenteriae 1617]
 gi|310332810|gb|EFQ00024.1| peptide chain release factor 2 [Escherichia coli 1827-70]
 gi|312290406|gb|EFR18286.1| peptide chain release factor 2 [Escherichia coli 2362-75]
 gi|313647930|gb|EFS12376.1| peptide chain release factor 2 [Shigella flexneri 2a str. 2457T]
 gi|315062195|gb|ADT76522.1| peptide chain release factor RF-2 [Escherichia coli W]
 gi|315256773|gb|EFU36741.1| peptide chain release factor 2 [Escherichia coli MS 85-1]
 gi|315289447|gb|EFU48842.1| peptide chain release factor 2 [Escherichia coli MS 110-3]
 gi|315293877|gb|EFU53229.1| peptide chain release factor 2 [Escherichia coli MS 153-1]
 gi|315295678|gb|EFU54998.1| peptide chain release factor 2 [Escherichia coli MS 16-3]
 gi|315614954|gb|EFU95592.1| peptide chain release factor 2 [Escherichia coli 3431]
 gi|320175922|gb|EFW51000.1| peptide chain release factor 2 [Shigella dysenteriae CDC 74-1112]
 gi|320182207|gb|EFW57110.1| peptide chain release factor 2 [Shigella boydii ATCC 9905]
 gi|320184566|gb|EFW59367.1| peptide chain release factor 2 [Shigella flexneri CDC 796-83]
 gi|320189234|gb|EFW63893.1| peptide chain release factor 2 [Escherichia coli O157:H7 str.
           EC1212]
 gi|320195009|gb|EFW69638.1| peptide chain release factor 2 [Escherichia coli WV_060327]
 gi|320202550|gb|EFW77120.1| peptide chain release factor 2 [Escherichia coli EC4100B]
 gi|320640534|gb|EFX10073.1| peptide chain release factor 2 [Escherichia coli O157:H7 str.
           G5101]
 gi|320645781|gb|EFX14766.1| peptide chain release factor 2 [Escherichia coli O157:H- str.
           493-89]
 gi|320651081|gb|EFX19521.1| peptide chain release factor 2 [Escherichia coli O157:H- str. H
           2687]
 gi|320656577|gb|EFX24473.1| peptide chain release factor 2 [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320662097|gb|EFX29498.1| peptide chain release factor 2 [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320667172|gb|EFX34135.1| peptide chain release factor 2 [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323154771|gb|EFZ40969.1| peptide chain release factor 2 [Escherichia coli EPECa14]
 gi|323162519|gb|EFZ48369.1| peptide chain release factor 2 [Escherichia coli E128010]
 gi|323167904|gb|EFZ53594.1| peptide chain release factor 2 [Shigella sonnei 53G]
 gi|323173888|gb|EFZ59517.1| peptide chain release factor 2 [Escherichia coli LT-68]
 gi|323180334|gb|EFZ65886.1| peptide chain release factor 2 [Escherichia coli 1180]
 gi|323183444|gb|EFZ68841.1| peptide chain release factor 2 [Escherichia coli 1357]
 gi|323188711|gb|EFZ73996.1| peptide chain release factor 2 [Escherichia coli RN587/1]
 gi|323935878|gb|EGB32177.1| peptide chain release 2 [Escherichia coli E1520]
 gi|323941589|gb|EGB37769.1| peptide chain release [Escherichia coli E482]
 gi|323946624|gb|EGB42647.1| peptide chain release 2 [Escherichia coli H120]
 gi|323951671|gb|EGB47546.1| peptide chain release [Escherichia coli H252]
 gi|323957389|gb|EGB53111.1| peptide chain release [Escherichia coli H263]
 gi|323960813|gb|EGB56434.1| peptide chain release [Escherichia coli H489]
 gi|323966691|gb|EGB62123.1| peptide chain release [Escherichia coli M863]
 gi|323971672|gb|EGB66901.1| peptide chain release [Escherichia coli TA007]
 gi|323978818|gb|EGB73899.1| peptide chain release [Escherichia coli TW10509]
 gi|324005542|gb|EGB74761.1| peptide chain release factor 2 [Escherichia coli MS 57-2]
 gi|324011760|gb|EGB80979.1| peptide chain release factor 2 [Escherichia coli MS 60-1]
 gi|324017287|gb|EGB86506.1| peptide chain release factor 2 [Escherichia coli MS 117-3]
 gi|324115093|gb|EGC09058.1| peptide chain release [Escherichia fergusonii B253]
 gi|324119931|gb|EGC13810.1| peptide chain release [Escherichia coli E1167]
 gi|325498452|gb|EGC96311.1| peptide chain release factor 2 [Escherichia fergusonii ECD227]
 gi|326339026|gb|EGD62841.1| peptide chain release factor 2 [Escherichia coli O157:H7 str. 1044]
 gi|326343092|gb|EGD66860.1| peptide chain release factor 2 [Escherichia coli O157:H7 str. 1125]
 gi|327251653|gb|EGE63339.1| peptide chain release factor 2 [Escherichia coli STEC_7v]
 gi|331037051|gb|EGI09275.1| peptide chain release factor 2 [Escherichia coli H736]
 gi|331042383|gb|EGI14525.1| peptide chain release factor 2 [Escherichia coli M605]
 gi|331047770|gb|EGI19847.1| peptide chain release factor 2 [Escherichia coli M718]
 gi|331053602|gb|EGI25631.1| peptide chain release factor 2 [Escherichia coli TA206]
 gi|331058394|gb|EGI30375.1| peptide chain release factor 2 [Escherichia coli TA143]
 gi|331063293|gb|EGI35206.1| peptide chain release factor 2 [Escherichia coli TA271]
 gi|331073707|gb|EGI45028.1| peptide chain release factor 2 [Escherichia coli H591]
 gi|331078131|gb|EGI49337.1| peptide chain release factor 2 [Escherichia coli H299]
 gi|332086815|gb|EGI91951.1| peptide chain release factor 2 [Shigella boydii 5216-82]
 gi|332087643|gb|EGI92770.1| peptide chain release factor 2 [Shigella dysenteriae 155-74]
 gi|332090885|gb|EGI95976.1| peptide chain release factor 2 [Shigella boydii 3594-74]
 gi|332344786|gb|AEE58120.1| peptide chain release factor protein PrfB [Escherichia coli UMNK88]
 gi|332752927|gb|EGJ83311.1| peptide chain release factor 2 [Shigella flexneri 4343-70]
 gi|332753726|gb|EGJ84105.1| peptide chain release factor 2 [Shigella flexneri K-671]
 gi|332754583|gb|EGJ84949.1| peptide chain release factor 2 [Shigella flexneri 2747-71]
 gi|332765821|gb|EGJ96034.1| peptide chain release factor 2 [Shigella flexneri 2930-71]
 gi|332999677|gb|EGK19262.1| peptide chain release factor 2 [Shigella flexneri VA-6]
 gi|333000272|gb|EGK19855.1| peptide chain release factor 2 [Shigella flexneri K-218]
 gi|333015042|gb|EGK34385.1| peptide chain release factor 2 [Shigella flexneri K-304]
          Length = 293

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 169/292 (57%), Positives = 208/292 (71%), Gaps = 1/292 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++
Sbjct: 1   MKQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL
Sbjct: 61  QAGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E 
Sbjct: 181 HVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 241 NKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|325285304|ref|YP_004261094.1| peptide chain release factor 1 [Cellulophaga lytica DSM 7489]
 gi|324320758|gb|ADY28223.1| Peptide chain release factor 1 [Cellulophaga lytica DSM 7489]
          Length = 358

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 103/346 (29%), Positives = 170/346 (49%), Gaps = 12/346 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCD 68
           + D  +   QR   ++     P +  +      L RE + L           E  + + +
Sbjct: 1   MIDKLNIVKQRFDEVSDLIIQPDIISDQKRYVELNREYKDLKKLCDKRELYLEFTNNIEE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              ++    + +   + +   +  +       E  +   +     DS +  +EV AG GG
Sbjct: 61  ANEIIADGSDAEMVEMAKMQLEEAKAGLPPLEEEIKLLLIPKDPEDSKNVVVEVRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYT++ E + +KT  +++ DG   G K     + G   YG LK E GV
Sbjct: 121 DEASIFAGDLFRMYTKYCESKGWKTNVIDLSDGTSGGYKEIQFEVTGDEVYGTLKFEAGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P  +D     I   D RID + +SG GGQ VNTT 
Sbjct: 181 HRVQRVPQTETQGRVHTSAATVMVLPEAEDFDVQ-IDPKDVRIDFFCSSGPGGQSVNTTY 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL K++E         +++ 
Sbjct: 240 SAVRLTHVPTGLVAQCQDQKSQHKNKEKAFRVLRSRLYDLELAKKQEE--DAAKRNSQVS 297

Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            G +   IR+Y   P   V D R  +      ++++GD+   +   
Sbjct: 298 SGDRSAKIRTYNY-PQGRVTDHRIGLTLYDLQNIINGDIQKIIDEL 342


>gi|259909551|ref|YP_002649907.1| peptide chain release factor 2 [Erwinia pyrifoliae Ep1/96]
 gi|224965173|emb|CAX56705.1| peptide chain release factor 2 [Erwinia pyrifoliae Ep1/96]
          Length = 293

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 167/290 (57%), Positives = 211/290 (72%), Gaps = 1/290 (0%)

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D   LLELA+E +D     E  + L  +  ++   +F  + SGE DS D Y+++ A
Sbjct: 3   QGLEDVSGLLELAVEAEDEETFNEAVNELDGLDKKLGELEFRRMFSGEYDSADCYMDIQA 62

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTE+QDWA+MLLRMY RWAE + FKTE +E  DGE AG KSAT+ I G  A+GWL+ 
Sbjct: 63  GSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGEVAGTKSATIKIIGDYAFGWLRT 122

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS  RRHTSFSS+++YP VDD+I+IEI+ +D RID YRASGAGGQHV
Sbjct: 123 ETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDNIDIEINPADLRIDVYRASGAGGQHV 182

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRITH+PT +VVQCQ +RSQHKNK QA+  LRAKLYE E+QK+       E +K
Sbjct: 183 NKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQTAEDNK 242

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           ++IGWG QIRSYVL     +KDLRT++E  +   VLDGDLD F++A+L  
Sbjct: 243 SDIGWGSQIRSYVLDD-SRIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 291


>gi|167993219|ref|ZP_02574314.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205328702|gb|EDZ15466.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
          Length = 360

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 111/335 (33%), Positives = 174/335 (51%), Gaps = 3/335 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE      ++ +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E + + +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK-REEIANIGESSKTEIGWGRQIR 313
           +PTG+VV+CQ ERSQHKNKA+A ++L A+++  E  K ++  A+   +         + R
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKCQQAEASTRRNLLGSGDRSDRNR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +Y   P   V D R N+      + ++G LD  ++
Sbjct: 309 TYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIE 342


>gi|283835350|ref|ZP_06355091.1| peptide chain release factor 2 [Citrobacter youngae ATCC 29220]
 gi|291068515|gb|EFE06624.1| peptide chain release factor 2 [Citrobacter youngae ATCC 29220]
          Length = 293

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 168/290 (57%), Positives = 207/290 (71%), Gaps = 1/290 (0%)

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ A
Sbjct: 3   QGLEDVSGLLELAVEADDEETFNEAVAELDTLEDKLAQLEFRRMFSGEYDSADCYLDIQA 62

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTE+QDWA+ML+RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+ 
Sbjct: 63  GSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIRIAGEYAYGWLRT 122

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHV
Sbjct: 123 ETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHV 182

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K
Sbjct: 183 NRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNK 242

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           ++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 243 SDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|329296879|ref|ZP_08254215.1| peptide chain release factor 1 [Plautia stali symbiont]
          Length = 293

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 170/292 (58%), Positives = 213/292 (72%), Gaps = 1/292 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +Q  L D   LLELA+E DD     E    L  + +++   +F  + SGE DS D Y+++
Sbjct: 1   MQQGLEDVQGLLELAVEADDEETFNEAVVELDALDVKLGELEFRRMFSGEYDSADCYMDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  +GE AG KSAT+ I G  AYGWL
Sbjct: 61  QAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESEGEVAGTKSATIKIIGDYAYGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS+++YP VDDSI+IEI+ +D RID YRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDSIDIEINPADLRIDVYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+  LRAKLYE E+QK+       E 
Sbjct: 181 HVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQAAEE 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT++E  +   VLDGDLD F++A+L  
Sbjct: 241 NKSDIGWGSQIRSYVLDD-SRIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 291


>gi|158520489|ref|YP_001528359.1| peptide chain release factor 1 [Desulfococcus oleovorans Hxd3]
 gi|238686878|sp|A8ZTL8|RF1_DESOH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|158509315|gb|ABW66282.1| peptide chain release factor 1 [Desulfococcus oleovorans Hxd3]
          Length = 356

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 110/345 (31%), Positives = 166/345 (48%), Gaps = 11/345 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL- 70
           +FD   +  +R   L     DP +  +    +   RE   L + +   +  +    +   
Sbjct: 1   MFDRLQDVERRFGELEGLMADPSIVNDREAYQKHSREHAELADIVDAYRRYKAVSDEIEK 60

Query: 71  --ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              LLE    E      +E S      +      Q         D+ +  +E+ AG GG 
Sbjct: 61  SRDLLEDRDPEIRELAKEEISRLKDERERLDGELQNLLTPKDPNDNKNVLVEIRAGTGGE 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A+ L RMY R+AE   +KTE +        G K    ++ G  AY  LK E G+H
Sbjct: 121 EASLFAHDLFRMYWRYAETMGWKTEIMSSSVTGSGGFKEVIFMVYGKGAYSHLKFESGIH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS  ++ V     + +E+ I  S+ + D +R+SG GGQ VNTTDS
Sbjct: 181 RVQRVPETEAQGRIHTSAVTVAVLA-EAEEVELHIDPSEIKTDVFRSSGPGGQSVNTTDS 239

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA+L +  +Q + E   I ++ K ++G 
Sbjct: 240 AVRLTHLPTGVVVICQDEKSQLKNKNKAMKVLRARLLDRMIQDQNE--KIAQNRKDQVGS 297

Query: 309 GR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G    +IR+Y   P   V D R  I       VL GDL + +   
Sbjct: 298 GDRSGRIRTYNF-PQGRVTDHRAGITLYKLESVLQGDLSELVNGL 341


>gi|332701398|ref|ZP_08421486.1| Peptide chain release factor 1 [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332551547|gb|EGJ48591.1| Peptide chain release factor 1 [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 357

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 117/346 (33%), Positives = 180/346 (52%), Gaps = 11/346 (3%)

Query: 13  LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           +F   ++  ++ + L ++   P ++ +    K L + R  L   ++  +E +     L D
Sbjct: 1   MFAKLESLERQFADLESQLSAPDIFNDQERYKKLTKARADLAQVVACFQEFKKLSRDLED 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           N  +L  A  E       E +   Q +    E  Q   L     D  D  LE+ AG GG 
Sbjct: 61  NREMLADADPEIRAMAESEIASIKQALPRLEEKLQLLLLPKDPLDEKDVILEIRAGTGGE 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY R+AE+  +K E L  H+    G K     I G   Y  LK E G+H
Sbjct: 121 EASLFAADLFRMYMRYAERVGWKVEMLSEHESATGGFKEVIASISGERVYSRLKYESGIH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS  ++ V P   + ++++I  ++ RID YRASGAGGQHVN T+S
Sbjct: 181 RVQRVPATETQGRIHTSAVTVAVLP-EAEEVDLDIDPTELRIDVYRASGAGGQHVNKTES 239

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PT  VV CQ E+SQHKNKA+A  +LR+++ +     R++  +     +  +G 
Sbjct: 240 AVRITHLPTNTVVTCQDEKSQHKNKAKAMKVLRSRILQSMQAARKDEEDAA--RRLLVGS 297

Query: 309 GRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           G +   IR+Y   P   + D R N+   S S V++G LDD ++A +
Sbjct: 298 GDRSGRIRTYNF-PQGRITDHRINLTLYSLSAVMEGALDDLVEALI 342


>gi|325105445|ref|YP_004275099.1| bacterial peptide chain release factor 1 (bRF-1) [Pedobacter
           saltans DSM 12145]
 gi|324974293|gb|ADY53277.1| bacterial peptide chain release factor 1 (bRF-1) [Pedobacter
           saltans DSM 12145]
          Length = 358

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 103/346 (29%), Positives = 173/346 (50%), Gaps = 12/346 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  +    R   +  +  +P   Q++     L +E + L   +    + ++ + +   
Sbjct: 1   MLDKLEAIKLRRDDVERELSNPEATQDMKRFAQLNKEYKDLGLIVDEYYKYKNVVSNIAT 60

Query: 72  LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             ++   E D  + +   +     +   +      +   +     D  DA +E+  G GG
Sbjct: 61  NKDILANEKDQELREMAKEELDVLIPEKEEMEAKIRLMLVPKDPGDEKDAIVEIRGGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+ E + ++TE LE+ DG   G K     + G + YG LK E GV
Sbjct: 121 DEAAIFAGDLYRMYTRYCEGKGWRTEVLEVTDGTNGGYKEVVFKVSGEDVYGTLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +S+ V P   + +++EI+ +D  + T R+ GAGGQ+VN  +
Sbjct: 181 HRVQRVPDTETQGRVHTSAASVAVLP-EAEEVDVEINPADIEMQTSRSGGAGGQNVNKVE 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           + V++TH PTG+VV CQ ERSQ  N+ +A  MLR+KLYE EL K  E   I    KT + 
Sbjct: 240 TKVQLTHKPTGIVVVCQVERSQLGNRERAMEMLRSKLYERELAKYNEE--IASKRKTMVS 297

Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            G +   IR+Y   P   V + R  +   +   V++G++ + + A 
Sbjct: 298 TGDRSAKIRTYNY-PQGRVTEHRIGLTLYNLPAVMNGEIQEILDAL 342


>gi|313206514|ref|YP_004045691.1| bacterial peptide chain release factor 1 (brf-1) [Riemerella
           anatipestifer DSM 15868]
 gi|312445830|gb|ADQ82185.1| bacterial peptide chain release factor 1 (bRF-1) [Riemerella
           anatipestifer DSM 15868]
 gi|325336038|gb|ADZ12312.1| Protein chain release factor A [Riemerella anatipestifer RA-GD]
          Length = 362

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 99/346 (28%), Positives = 165/346 (47%), Gaps = 12/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QR + +      P +  +      L +E   L   +    E    L       E+
Sbjct: 9   LEAIKQRYNEVADLIIQPDVISDQKRYSSLNKEYSDLGKIVKVFDEYSTALNAIKEADEI 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  ++       Q     +   + E          AD  +  +E+ AG GG ES 
Sbjct: 69  IADGSDKDLVDLAKMEKQEAIDRIPSIEEELKYLLIPKDPADDKNVMVELRAGTGGDESA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   + RMYT + + + +K E  + ++  + G K   + ++G   YG +K E GVHR+ 
Sbjct: 129 IFVEDVYRMYTMYFKSKGWKHEVTDSNEASK-GYKELIMRVEGDGVYGIMKFESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P   + +++EI+ +D  + T R+ GAGGQ+VN  ++ V+
Sbjct: 188 RVPETESQGRVHTSAITVAVLP-EAEEVDVEINPADIEMQTSRSGGAGGQNVNKVETKVQ 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +TH PTG+VV CQQ RSQ  N+  A  MLR KLY++ELQK +   +I    KT +  G +
Sbjct: 247 LTHKPTGIVVVCQQARSQLANRELAMEMLRTKLYDIELQKVQ--GDIAAQRKTMVSTGDR 304

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              IR+Y   P   V D R N    +  + ++GD+ + + A +  +
Sbjct: 305 SAKIRTYNY-PQGRVTDHRINKSIYNLDNFMNGDIQEMLDALIMAE 349


>gi|323339960|ref|ZP_08080227.1| peptide chain release factor RF1 [Lactobacillus ruminis ATCC 25644]
 gi|323092602|gb|EFZ35207.1| peptide chain release factor RF1 [Lactobacillus ruminis ATCC 25644]
          Length = 362

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 105/352 (29%), Positives = 173/352 (49%), Gaps = 12/352 (3%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            LFD       R   L     DP +  +      L +E   L   +   ++ +  +    
Sbjct: 5   KLFDRLQMLADRYEELGELLSDPDVIADSKRFMELSKEMADLRETVEKYEKYKQVVQQIK 64

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAG 126
              E+     D  +     + L   K E +  +       L     D  D  +E+   AG
Sbjct: 65  DDEEMLSTGLDDEMAAMVKEELSDSKNEKQKLEQEIKILLLPKDPNDGKDLIMEIRGAAG 124

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L  MY+++AE++ +  E ++ +  E  G K   L I G N +  LK E G
Sbjct: 125 GDEASLFAADLFSMYSKYAERQGWSIEVIDKNMTEVGGFKEIALTINGKNVWSKLKYESG 184

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P  ++ +EI++   D R+D YR+SGAGGQH+N T
Sbjct: 185 AHRVQRVPVTESAGRVHTSTATVVVMP-EEEDVEIDLDPKDIRVDVYRSSGAGGQHINKT 243

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+TH+PTG+VV  Q +RSQ +N+ +A  +L+A++Y+    K +E +   E+ K+ +
Sbjct: 244 SSAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDYY--KSQEQSEYDENRKSAV 301

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       +++G+LDD + A +   +
Sbjct: 302 GTGDRSERIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELDDVIDALVLYDQ 352


>gi|239828604|ref|YP_002951228.1| peptide chain release factor 1 [Geobacillus sp. WCH70]
 gi|259585224|sp|C5D9N4|RF1_GEOSW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|239808897|gb|ACS25962.1| peptide chain release factor 1 [Geobacillus sp. WCH70]
          Length = 358

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 115/351 (32%), Positives = 179/351 (50%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +   +R   LN    DP +  +  + +   +E+  L   +   +E +        
Sbjct: 1   MFERLEAVEERYEKLNQLLMDPEVINDPKKLRDYSKEQSDLSETVQTYREYKSVRKQLDE 60

Query: 72  LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +  E+ D  + +   +      Q+ +  V   +   L     D  +  +E+ A AGG
Sbjct: 61  AKAMLEEKLDPEMREMVKEEIDELEQKEEELVNKLKILLLPKDPNDEKNVIMEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE + +KTE +E       G K     I G  AY  LK E G 
Sbjct: 121 EEAALFAGDLYRMYTRYAESQGWKTEVIEASPTGLGGYKEIIFTIIGKGAYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P   + IE+EI+E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLP-EMEEIEVEINEKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+VV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K  +G
Sbjct: 240 SAVRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLRARIYDKY--QQEARAEYDQTRKQAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       VLDG+LD+ ++A +   +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQVLDGNLDEIIEALILDDQ 347


>gi|221068955|ref|ZP_03545060.1| peptide chain release factor 1 [Comamonas testosteroni KF-1]
 gi|299531475|ref|ZP_07044881.1| peptide chain release factor 1 [Comamonas testosteroni S44]
 gi|220713978|gb|EED69346.1| peptide chain release factor 1 [Comamonas testosteroni KF-1]
 gi|298720438|gb|EFI61389.1| peptide chain release factor 1 [Comamonas testosteroni S44]
          Length = 359

 Score =  219 bits (557), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 115/343 (33%), Positives = 173/343 (50%), Gaps = 7/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QRL  L+       +  ++ + + + RE   +    S          D     E+
Sbjct: 9   LERYAQRLQELDFLLSREDIMGDMKQYRTISREHADVTAIASRYTRYLQTEADIAAAREM 68

Query: 76  ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + QE   + +       +  Q   L     D+  A++E+ AG GG ES  +A
Sbjct: 69  LDDPDMAEMAQEEIGSGEAELIKLEDELQRLLLPKDPDDARPAFVEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+A    +K E +   + E  G K   L I+G N YG L+ E G HR+ R+ 
Sbjct: 129 GDLTRMYTRYAANVGWKVEVMSASENEIGGYKEVVLRIEGDNVYGALRFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D++  I ++ +D RIDT+RASGAGGQH+N TDSAVR+ H
Sbjct: 189 ATETQGRIHTSACTVAVMPEPDEAEAITLNPADLRIDTFRASGAGGQHINKTDSAVRVVH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+V +CQ  RSQH NKA+A  +L+A++ E E  +R   A      K  IG G    +
Sbjct: 249 LPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSER--AAKEAAMRKGLIGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IR+Y   P   + D R N+       V++GDL D ++A    +
Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYKLLAVMEGDLGDVIQALQHAR 348


>gi|85059968|ref|YP_455670.1| peptide chain release factor RF-2 [Sodalis glossinidius str.
           'morsitans']
 gi|84780488|dbj|BAE75265.1| peptide chain release factor RF-2 [Sodalis glossinidius str.
           'morsitans']
          Length = 289

 Score =  219 bits (557), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 167/287 (58%), Positives = 207/287 (72%), Gaps = 1/287 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + D   LLELA+ EDD     ET   L  ++ ++   +F  + SGE DS D Y+++ AG+
Sbjct: 1   MEDVAGLLELAVGEDDEETFLETQAELDGLEAKLGQLEFRRMFSGEYDSADCYVDIQAGS 60

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWA+MLLRMY RWAE R FKTE +E  +GE AGIKS T+ + G  AYGWL+ E 
Sbjct: 61  GGTEAQDWASMLLRMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKVIGDYAYGWLRTET 120

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN 
Sbjct: 121 GVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNR 180

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVRITH+PT +V QCQ +RSQHKNK QA   L+AKLYE ELQK+       E +K++
Sbjct: 181 TESAVRITHLPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFELQKKNAEKKALEDTKSD 240

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 241 IGWGSQIRSYVLDD-SRIKDLRTGVETRNAQSVLDGDLDKFIEASLK 286


>gi|15672577|ref|NP_266751.1| peptide chain release factor 1 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|13878663|sp|Q9CHX3|RF1_LACLA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|12723487|gb|AAK04693.1|AE006292_13 peptide chain release factor 1 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|326406096|gb|ADZ63167.1| peptide chain release factor RF-1 [Lactococcus lactis subsp. lactis
           CV56]
          Length = 357

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 102/352 (28%), Positives = 176/352 (50%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---D 68
           +FD  ++ V R   L     DP +  +      L RE   L + ++   E +  L    D
Sbjct: 1   MFDQLESIVGRYEELGELLSDPEVVSDTKRFMELSREEADLRDKVATYNEYKKVLETISD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAG 126
           +  +L     +DD   + +   +  + + E+  ++ + LL  +  +   +  LE+   AG
Sbjct: 61  SEEMLGEGGLDDDMKEMLKEELSSAKSQKELLEEEIKILLLPKDPNDGKNIILEIRGAAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  LL MY  ++E + +K E +E +     G K  + LI GP+ Y  LK E G
Sbjct: 121 GDEAALFAGDLLNMYQHFSESQGWKFEIMEANITGIGGYKEVSALISGPSVYSKLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   ++  R HTS +++ V P V++     I + D R+D Y ASGAGGQ+VN  
Sbjct: 181 AHRVQRVPVTETQGRVHTSTATVLVMPEVEEFEMT-IDQKDLRVDIYHASGAGGQNVNKV 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            +AVR+ H+PTG+ V+ Q+ER+Q KN+ +A  +L  K+++    ++ E+       K+ +
Sbjct: 240 ATAVRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYY--QQIELDKQNAERKSTV 297

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 298 GTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKMDEVIDALIVYDQ 348


>gi|71281852|ref|YP_270226.1| peptide chain release factor 1 [Colwellia psychrerythraea 34H]
 gi|119361527|sp|Q47Y94|RF1_COLP3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71147592|gb|AAZ28065.1| peptide chain release factor 1 [Colwellia psychrerythraea 34H]
          Length = 362

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 112/337 (33%), Positives = 180/337 (53%), Gaps = 5/337 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP    +  + + L +E + LD   S     +    D      +
Sbjct: 9   LEVLVERFEEVQALLSDPATISDQEKFRALSKEFKQLDAVTSVFNNYKSAEDDFSTAELM 68

Query: 76  ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             ++D         +     K      +  Q   L     D N+ ++E+ AGAGG E+  
Sbjct: 69  LKDDDPDMREMAQEEFKDAKKAVADIADELQILLLPRDPNDDNNCFVEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AEK+ +K E +  ++ E+ G K   + + G   +G +K E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAEKKGWKIEVMNSNESEQGGYKELIMKVNGEGVFGHMKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P + ++  IEI+++D ++DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPATESQGRVHTSACTVVVMPEIPEADAIEINKADLKVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQ 311
           THIPTGVVV+CQ++RSQHKN+AQA ++L+A+L + E +KR         +    G    +
Sbjct: 249 THIPTGVVVECQEQRSQHKNRAQAMSVLQARLQQAEDEKRRSEEESSRRNLVASGDRSER 308

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           IR+Y   P   + D R N+     +++++G L   M+
Sbjct: 309 IRTYNF-PQGRMSDHRINLTLYRLNEIMEGSLQLVME 344


>gi|330823524|ref|YP_004386827.1| peptide chain release factor 1 [Alicycliphilus denitrificans K601]
 gi|329308896|gb|AEB83311.1| Peptide chain release factor 1 [Alicycliphilus denitrificans K601]
          Length = 371

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 116/343 (33%), Positives = 180/343 (52%), Gaps = 7/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QRLS L+       +  ++ + + + RE   +          + R  D     E+
Sbjct: 20  LERYAQRLSELDFLLSREDIMADMQQYRAISREHADVTAVAGRYARYRQREADLEGAREM 79

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + QE     +    ++E + Q   L     D  +A++E+ AG GG ES  +A
Sbjct: 80  LEDPDMAEMAQEEIAAAEAELAQLEDELQRMLLPKDPDDERNAFVEIRAGTGGDESALFA 139

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+A  + +K E +  ++ E  G K   L I+G +AYG L+ E G HR+ R+ 
Sbjct: 140 GDLARMYTRYAATQGWKVEVMSANESELGGYKEVVLRIEGDHAYGRLRFESGGHRVQRVP 199

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D++  I ++ +D RIDT+RASGAGGQH+N TDSAVR+ H
Sbjct: 200 ATETQGRIHTSACTVAVMPEPDEAQAITLNPADLRIDTFRASGAGGQHINKTDSAVRVVH 259

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+V +CQ  RSQH NKA+A  +L+A++ E E  +R   A      K  IG G    +
Sbjct: 260 LPTGIVAECQDGRSQHANKAKALQVLQARIQEKERSER--AAKEAALRKGLIGSGDRSDR 317

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IR+Y   P   + D R N+       V++GDL + ++A    +
Sbjct: 318 IRTYNF-PQGRLTDHRINLTLYKLLAVMEGDLGEVLQALQHAR 359


>gi|30961857|gb|AAP40012.1| peptide chain release factor-2 [Citrobacter freundii]
          Length = 293

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 168/290 (57%), Positives = 207/290 (71%), Gaps = 1/290 (0%)

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ A
Sbjct: 3   QGLEDVSGLLELAVEADDEETFNEAVAELDTLEDKLAQLEFRRMFSGEYDSADCYLDIQA 62

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTE+QDWA+ML+RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+ 
Sbjct: 63  GSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIRIAGEYAYGWLRT 122

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHV
Sbjct: 123 ETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHV 182

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K
Sbjct: 183 NRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTK 242

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           ++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 243 SDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|262372379|ref|ZP_06065658.1| peptide chain release factor 1 [Acinetobacter junii SH205]
 gi|262312404|gb|EEY93489.1| peptide chain release factor 1 [Acinetobacter junii SH205]
          Length = 362

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 114/339 (33%), Positives = 170/339 (50%), Gaps = 7/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    + L RE   L        + +    D      +
Sbjct: 9   LDQLCDRHEELTALLADVEVISDNKRFRKLSREHNDLTEITEVWGKYRQAEEDIETAEMM 68

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E     + +     E      +     D+N AYLE+ AG GG E+  ++
Sbjct: 69  KSDPDFKDMAEEEIKENKALLVELEEQLNVLMIPKDPNDANAAYLEIRAGTGGDEAAIFS 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+++AE + ++ E L  ++GE  G K     + G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSKYAETQGWRIEVLSENEGEHGGYKEVICRVDGEGVYGRLKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P VD    +EI+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IP+GVVV+CQ+ERSQHKNKA+A  +L ++L   +       A   E  +  +G G    +
Sbjct: 249 IPSGVVVECQEERSQHKNKAKAMALLVSRLENAKR--AAADAATSEMRRDLVGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   + D R N+       +++GDL + + + 
Sbjct: 307 IRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 344


>gi|138896954|ref|YP_001127407.1| peptide chain release factor 1 [Geobacillus thermodenitrificans
           NG80-2]
 gi|196249772|ref|ZP_03148468.1| peptide chain release factor 1 [Geobacillus sp. G11MC16]
 gi|166223561|sp|A4ITK8|RF1_GEOTN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|134268467|gb|ABO68662.1| Peptide chain release factor 1 [Geobacillus thermodenitrificans
           NG80-2]
 gi|196210648|gb|EDY05411.1| peptide chain release factor 1 [Geobacillus sp. G11MC16]
          Length = 358

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 116/351 (33%), Positives = 179/351 (50%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +   QR   LN    DP +  +  + +   +E+  L   +   +E +        
Sbjct: 1   MFDRLEAVEQRYEKLNELLMDPAVINDPKKLRDYSKEQADLTETVQTYREYKSVRSQLAE 60

Query: 72  LLELALEEDDCSILQE----TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +  E+ +  + +       +  +R +  VE  +   L     D  +  +E+ A AGG
Sbjct: 61  AKAMLEEKLEPELREMVKEEIDELEEREEALVEKLKVLLLPKDPNDEKNVIMEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE + +KTE +E       G K    ++ G  AY  LK E G 
Sbjct: 121 EEAALFAGDLYRMYTRYAESQGWKTEVIEASPTGLGGYKEIIFMVNGKGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P   + +E+EI E D R+DTY +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLP-EMEEVEVEIHEKDIRVDTYASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+VV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K  +G
Sbjct: 240 SAVRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLRARIYDKY--QQEARAEYDQTRKQAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       VLDG LD+ ++A +   +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDLVLDGQLDEIIEALILDDQ 347


>gi|313147825|ref|ZP_07810018.1| peptide chain release factor RF-2 [Bacteroides fragilis 3_1_12]
 gi|313136592|gb|EFR53952.1| peptide chain release factor RF-2 [Bacteroides fragilis 3_1_12]
          Length = 337

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 128/332 (38%), Positives = 196/332 (59%), Gaps = 11/332 (3%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           +T+ P  W +  +A+  M+  + L   I    E++    +  +  +     D+    QE 
Sbjct: 2   RTQAPGFWDDQKKAEAQMKLVKGLQKWIDGYNEVKTLADELELAFDFYK--DELVTEQEV 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            +   +    VE  + +++L  EAD     L++++GAGGTESQDWA+ML+RMY R+AE  
Sbjct: 60  DEAYAKALEHVENLELQNMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYLRYAETN 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +K     + +G+EAGIK+ T+ I+G  AYG+LKGE GVHRLVR+SPY++  +R TSF+S
Sbjct: 120 GYKATMANLQEGDEAGIKTCTIQIEGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP--------TGVV 260
           ++V P+VDDSIE+ I  +    DT+R+ GAGGQ+VN  +S VR+ +            ++
Sbjct: 180 VFVTPLVDDSIEVNILPACISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEIL 239

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           ++  + R Q KN+  A   LR+ LY+ ELQ R       E+ K +I WG QIRSYV    
Sbjct: 240 IENTETRDQPKNRENAMRQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD- 298

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           + VKD RTN + +  + V+DG ++ F+KA L 
Sbjct: 299 RRVKDHRTNFQTSDVNGVMDGKIEGFIKAYLM 330


>gi|302131691|ref|ZP_07257681.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. tomato NCPPB 1108]
          Length = 304

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 166/302 (54%), Positives = 220/302 (72%), Gaps = 1/302 (0%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L   +  + E+   L D   LL ++ EE+D + + + +  ++R++  +E  +F  + SGE
Sbjct: 2   LAQIVETLDEMSSGLVDAKDLLLMSAEEEDQAAIDDVAAEVERLRASLEKLEFRRMFSGE 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK AT+ 
Sbjct: 62  MDPNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVH 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ SD RID
Sbjct: 122 IKGEYAFGWLRTEIGVHRLVRKSPFDSGTRRHTSFSAVFVSPEIDDNIEIDINPSDLRID 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRA+LYE E+QK
Sbjct: 182 TYRSSGAGGQHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           R   +   E +K++IGWG QIRSYVL     +KDLRTNIE++    VLDGD+D+++ A+L
Sbjct: 242 RNAASQALEDTKSDIGWGHQIRSYVLD-ASRIKDLRTNIERSDCDKVLDGDIDEYLIASL 300

Query: 352 AI 353
             
Sbjct: 301 KQ 302


>gi|331674375|ref|ZP_08375135.1| peptide chain release factor 2 [Escherichia coli TA280]
 gi|331068469|gb|EGI39864.1| peptide chain release factor 2 [Escherichia coli TA280]
          Length = 291

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 169/290 (58%), Positives = 206/290 (71%), Gaps = 1/290 (0%)

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ A
Sbjct: 1   QGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQA 60

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+ 
Sbjct: 61  GSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRT 120

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHV
Sbjct: 121 ETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHV 180

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K
Sbjct: 181 NRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNK 240

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           ++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 241 SDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 289


>gi|183599838|ref|ZP_02961331.1| hypothetical protein PROSTU_03355 [Providencia stuartii ATCC 25827]
 gi|188022110|gb|EDU60150.1| hypothetical protein PROSTU_03355 [Providencia stuartii ATCC 25827]
          Length = 293

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 167/290 (57%), Positives = 211/290 (72%), Gaps = 1/290 (0%)

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D   LLELA+E DD     E  + L +++ ++E  +F  + SGE DS D Y+++ A
Sbjct: 3   QGLEDVEGLLELAIEADDEDTFNEAGEELTQLQAKLEQLEFRRMFSGEYDSADCYIDLQA 62

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTE+QDWA+ML+RMY RWAE + FKTE +E  DG+ AG+KSAT+ + G  AYGWL+ 
Sbjct: 63  GSGGTEAQDWASMLMRMYLRWAESKGFKTEIIEESDGDVAGLKSATIKVIGDYAYGWLRT 122

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS  RRHTSFSS ++YP VDD I+IEI+ +D RID YRASGAGGQHV
Sbjct: 123 ESGVHRLVRKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHV 182

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYELE+QK+       E +K
Sbjct: 183 NKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMRQLKAKLYELEMQKKNADKQAMEENK 242

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           ++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 243 SDIGWGSQIRSYVLDD-ARIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 291


>gi|320538185|ref|ZP_08038080.1| peptide chain release factor 1 [Treponema phagedenis F0421]
 gi|320145002|gb|EFW36723.1| peptide chain release factor 1 [Treponema phagedenis F0421]
          Length = 371

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 111/355 (31%), Positives = 181/355 (50%), Gaps = 14/355 (3%)

Query: 10  LGGLFD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
            G +     +N   +   +  + +DP L +NV   K +MR+  +L   +           
Sbjct: 12  FGKMMKDRLENLRNQWKQVELEVQDPDLVKNVARYKDVMRQHGYLSKLMDEYDFYLQTEK 71

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHA 123
                  L  EE D  + +   + +  ++ ++E  +       +     +  +  +E+  
Sbjct: 72  QLQEAHALMQEESDHELKEMAREEMHALEKQLEQSEADLKMLLIPPDPMEEKNIIMEIRG 131

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G GG E+  +A  L +MYT +AE + +  E ++ ++ E  G K     I G   YG L+ 
Sbjct: 132 GTGGDEAALFAADLFKMYTHYAESKNWTYEIMDANETELGGFKEIVFSISGKYVYGSLRY 191

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHR+ R+   + + R HTS  ++ V P  +++  + I   D R+D  RA G GGQ V
Sbjct: 192 ESGVHRVQRVPETEGSGRIHTSAVTVAVLPEAEETEIV-IKPEDLRVDVMRAGGPGGQSV 250

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVR+THIPTG+VV CQ E+SQ KNKA+A  +LR++LY+LE  K+ +     ++ K
Sbjct: 251 NTTDSAVRLTHIPTGMVVICQDEKSQIKNKAKALRVLRSRLYDLEESKKNQER--AQNRK 308

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT-LAIK 354
           +++G G    +IR+Y   P   V D R N+       VL GDLD+ ++   +A +
Sbjct: 309 SQVGSGDRSERIRTYNF-PQNRVTDHRINLTLYQLDAVLQGDLDEIIEPLCIAAR 362


>gi|325107093|ref|YP_004268161.1| bacterial peptide chain release factor 1 (bRF-1) [Planctomyces
           brasiliensis DSM 5305]
 gi|324967361|gb|ADY58139.1| bacterial peptide chain release factor 1 (bRF-1) [Planctomyces
           brasiliensis DSM 5305]
          Length = 358

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 103/347 (29%), Positives = 168/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QR   L  +  DP +  +  +   + +E   L      +++      D      +
Sbjct: 5   LETKYQRFLELEKQMADPDVLSDPQKMLAIQKEYGGLKKVAHAVRDYHTLEADIEAAEMM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EEDD    +     L  ++   +      +  +            +E+ AG GG E+ 
Sbjct: 65  LEEEDDPDDREYAQSELDALEKRRDKMAEELEDLATAGDSITRGGLIMEIRAGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY+R+ E R +K E ++ H  E  G+K     + G  A+  L+ E G HR+ 
Sbjct: 125 LFALNLYEMYSRYIETRGWKKEVMDFHPTEMGGVKEVVFSVSGEGAFHELQFESGGHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   D +EI+I   D ++DT+RASG GGQ VN T+SA+R
Sbjct: 185 RVPETETQGRIHTSAATVAVLP-EADEVEIDIKPEDLKVDTFRASGPGGQKVNKTESAIR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG VV CQ E+SQHKN+A A  +LR+++  LE Q++   +      +T IG G  
Sbjct: 244 ITHLPTGTVVTCQDEKSQHKNRASAMRVLRSRI--LENQQQAADSERASQRRTLIGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       ++ G+L++ +   L   +
Sbjct: 302 SSRIRTYNY-PQGRVTDHRIGLTLHKLDQIMAGNLEELVSGLLEFDR 347


>gi|295400673|ref|ZP_06810650.1| peptide chain release factor 1 [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294977254|gb|EFG52855.1| peptide chain release factor 1 [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 358

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 120/351 (34%), Positives = 186/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68
           +F+  +   +R   LN    DP +  +  + +   +E+  L+  +   +E +    +L D
Sbjct: 1   MFERLEAVEERYEKLNQLLMDPEVINDPKKLRDYSKEQSDLEETVQTYREYKSVCKQLDD 60

Query: 69  NLILLELALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +LE  L+ +   +++E  D   QR +  +   +   L     D  +  +E+ A AGG
Sbjct: 61  AKAMLEEKLDPEMREMVKEEIDELEQRQEELINKLKILLLPKDPNDEKNVIMEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE + +KTE +E       G K     I G  AY  LK E G 
Sbjct: 121 EEAALFAGDLYRMYTRYAESQGWKTEVIEASPTGLGGYKEIIFTINGKGAYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P   + IE+EI+E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLP-EMEEIEVEINEKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+VV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K  +G
Sbjct: 240 SAVRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLRARIYDKY--QQEARAEYDQTRKQAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       VLDG LD+ ++A +   +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQVLDGSLDEIIEALILDDQ 347


>gi|222152015|ref|YP_002561175.1| peptide chain release factor 1 [Macrococcus caseolyticus JCSC5402]
 gi|254790887|sp|B9E8G1|RF1_MACCJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|222121144|dbj|BAH18479.1| peptide chain release factor 1 [Macrococcus caseolyticus JCSC5402]
          Length = 358

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 112/351 (31%), Positives = 184/351 (52%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +   QR   LN    DP +  +  + +   +E+  L   +   +E ++       
Sbjct: 1   MFDQLEIVEQRYEQLNELLSDPDIVSDTDKLREYSKEQADLQETVEVYREYKEVKQQLEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
            LE+  E  D    +   + +  +K ++   +       +     D  +  +E+   AGG
Sbjct: 61  ALEMMGEASDADEQEMIKEEINTLKPQIPELEERMKLLLIPKDPMDDKNVVMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+R++E++ +K E +E ++ +  G K  + +I G  AY  LK E G 
Sbjct: 121 DEANIFAGDLFRMYSRFSEEQGWKIEVMETNEADHGGFKEISFIIIGKGAYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS +++ V P   + +EIEI + D RI+TYR+SG+GGQHVNTTD
Sbjct: 181 HRVQRIPTTESGGRIHTSTATVAVLP-EVEDVEIEIRQEDLRIETYRSSGSGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG+V     E+SQ KN+ +A  +L+ ++++ +LQ  EE A   E  K+ +G
Sbjct: 240 SAVRITHIPTGIVATSS-EKSQIKNREKALKLLKTRVFDAKLQ--EEQAKYSEQRKSAVG 296

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++G L + + A    ++
Sbjct: 297 TGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIVEGKLGEIIDALTIAEQ 346


>gi|213962528|ref|ZP_03390790.1| peptide chain release factor 2 [Capnocytophaga sputigena Capno]
 gi|213954854|gb|EEB66174.1| peptide chain release factor 2 [Capnocytophaga sputigena Capno]
          Length = 317

 Score =  219 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 141/308 (45%), Positives = 211/308 (68%), Gaps = 2/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRE +     +   +E +    D  +LL+   E +  +   +         +E    +F 
Sbjct: 2   MRELRTQKKWVEDYEEAESLTSDVEVLLDFFKEGEATADEVDQQYAQALHAIEAL--EFR 59

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LS E D+  A L++ AGAGGTES DWA+MLLRMYT W   +K+K + L   +G+ AGI
Sbjct: 60  NMLSDEGDAMSAVLQITAGAGGTESCDWASMLLRMYTMWCNNQKYKVKTLNFQEGDVAGI 119

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T+ I+G  A+G+LKGE GVHRLVRISP+DSN++RHTSF+S++VYP+ DD+IEIEI+ 
Sbjct: 120 KTVTIEIEGEYAFGYLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDTIEIEINP 179

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D   +T R+SGAGGQ+VN  ++AVR+ H PTG++++  + RSQ  NK +A  +L+++LY
Sbjct: 180 ADITFETMRSSGAGGQNVNKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQLLKSQLY 239

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KR+   +  E+ K +I WG QIR+YV+ PY++VKD+RTN E T    V++G+LD+
Sbjct: 240 EIELKKRQAKRDEIEAGKMKIEWGSQIRNYVMHPYKLVKDVRTNYESTDVDSVMNGELDE 299

Query: 346 FMKATLAI 353
           F+KA L +
Sbjct: 300 FLKAYLML 307


>gi|226952752|ref|ZP_03823216.1| peptide chain release factor 1 [Acinetobacter sp. ATCC 27244]
 gi|294650077|ref|ZP_06727461.1| peptide chain release factor RF1 [Acinetobacter haemolyticus ATCC
           19194]
 gi|226836501|gb|EEH68884.1| peptide chain release factor 1 [Acinetobacter sp. ATCC 27244]
 gi|292824028|gb|EFF82847.1| peptide chain release factor RF1 [Acinetobacter haemolyticus ATCC
           19194]
          Length = 362

 Score =  219 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 114/339 (33%), Positives = 169/339 (49%), Gaps = 7/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    + L RE   L        + +    D      +
Sbjct: 9   LDQLCDRHEELTALLADVEVISDNKRFRKLSREHNDLTEITEVWGKYRQAEEDIETAEMM 68

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E     +       +      +     D+N AYLE+ AG GG E+  ++
Sbjct: 69  KSDPDFKDMAEEEIKENKARLVELEDQLNVLMIPKDPNDANAAYLEIRAGTGGDEAAIFS 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+++AE + ++ E L  ++GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSKYAETQGWRIEVLSENEGEHGGYKEVICRIDGEGVYGRLKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P VD    +EI+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IP+GVVV+CQ+ERSQHKNKA+A  +L ++L   +       A   E  +  +G G    +
Sbjct: 249 IPSGVVVECQEERSQHKNKAKAMALLVSRLENAKR--AAADAATSEMRRDLVGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   + D R N+       +++GDL + + + 
Sbjct: 307 IRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 344


>gi|238783657|ref|ZP_04627677.1| Peptide chain release factor 2 [Yersinia bercovieri ATCC 43970]
 gi|238715370|gb|EEQ07362.1| Peptide chain release factor 2 [Yersinia bercovieri ATCC 43970]
          Length = 289

 Score =  219 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 166/288 (57%), Positives = 207/288 (71%), Gaps = 1/288 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + D   LLELA+E DD     E    L  +  ++   +F  + SGE DS + YL++ AG+
Sbjct: 1   MEDVTGLLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQAGS 60

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWA+MLLRMY RWAE + FKTE +E  DG+ AG+KSAT+ I G  A+GWL+ E 
Sbjct: 61  GGTEAQDWASMLLRMYLRWAESKGFKTEIIEESDGDVAGLKSATIKIIGEYAFGWLRTET 120

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN 
Sbjct: 121 GVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNK 180

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E +K++
Sbjct: 181 TESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDNKSD 240

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 241 IGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 287


>gi|332160509|ref|YP_004297086.1| peptide chain release factor 2 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318607022|emb|CBY28520.1| peptide chain release factor 2; programmed frameshift-containing
           [Yersinia enterocolitica subsp. palearctica Y11]
 gi|325664739|gb|ADZ41383.1| peptide chain release factor 2 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330863446|emb|CBX73565.1| peptide chain release factor 2 [Yersinia enterocolitica W22703]
          Length = 289

 Score =  219 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 166/288 (57%), Positives = 207/288 (71%), Gaps = 1/288 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + D   LLELA+E DD     E    L  +  ++   +F  + SGE DS + YL++ AG+
Sbjct: 1   MDDVTGLLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQAGS 60

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWA+MLLRMY RWAE + FKTE +E  DG+ AG+KSAT+ I G  A+GWL+ E 
Sbjct: 61  GGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGDVAGLKSATIKIIGDYAFGWLRTET 120

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN 
Sbjct: 121 GVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNK 180

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E +K++
Sbjct: 181 TESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQMLEDNKSD 240

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 241 IGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 287


>gi|229496751|ref|ZP_04390462.1| peptide chain release factor 1 [Porphyromonas endodontalis ATCC
           35406]
 gi|229316297|gb|EEN82219.1| peptide chain release factor 1 [Porphyromonas endodontalis ATCC
           35406]
          Length = 362

 Score =  219 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 116/345 (33%), Positives = 166/345 (48%), Gaps = 11/345 (3%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           L    N   R   +     DP +  +      L +E + L+      +E      +    
Sbjct: 7   LLHLQNLEARFEEVALLITDPSVIADDKRFVRLSKEYRRLEELHQAHEEYNRLKLNRQEA 66

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGT 128
           +EL    DD  +     + +     +    Q       L     D  +A +E+ AG GG 
Sbjct: 67  MELLNGTDDEEMKALAKEEIAFADEQCPQLQEKIALLLLPDDPEDGKNAIMEIRAGTGGD 126

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L +MYTR+ E   ++ E     +G   G K     + G NAYG LK E GVH
Sbjct: 127 EAALFARDLFKMYTRFVEGLGWRVEVSSYTEGTLGGYKEIVFSVTGDNAYGTLKYESGVH 186

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS +++ V+P  D+     I ESD RIDT+ +SGAGGQ VNTT S
Sbjct: 187 RVQRVPETEAQGRIHTSAATVAVFPEADEFDVE-IKESDLRIDTFCSSGAGGQSVNTTYS 245

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRI H+PTG+ VQ Q ERSQ KNKA+A   LR+++Y LE QK  +   +    KT +  
Sbjct: 246 AVRIVHVPTGITVQSQDERSQLKNKAKALTELRSRIYNLEHQKYLDE--VASRRKTMVST 303

Query: 309 GRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G +   IR+Y   P   + D R  +   +   VLDGDL   + A 
Sbjct: 304 GDRSAKIRTYNY-PQGRLTDHRIGLTLYNLQAVLDGDLKPIIDAL 347


>gi|58583231|ref|YP_202247.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84625067|ref|YP_452439.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188575465|ref|YP_001912394.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|75434334|sp|Q5GWQ9|RF1_XANOR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361638|sp|Q2NZW2|RF1_XANOM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238689539|sp|B2SQN5|RF1_XANOP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|58427825|gb|AAW76862.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84369007|dbj|BAE70165.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188519917|gb|ACD57862.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 361

 Score =  219 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 110/345 (31%), Positives = 172/345 (49%), Gaps = 8/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L     DP +  N  + + L RE   L+     +++      D      +
Sbjct: 9   LEALAERREELQHLLSDPDVVNNNDKFRTLSRELSQLEPVAVALEDEARAKADLSAAEAM 68

Query: 76  ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E     Q   +          +     D  + +LEV AG GG E+  +A
Sbjct: 69  RTDPEMRELAEEEIAAAQARLEELDTQLASLLVPRDPRDDGNLFLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+AE++ +K E      GE  G K     + G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ + P  DD  EI I+ +D ++DT+R+SGAGGQHVN T+SA+RITH
Sbjct: 189 ATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDTFRSSGAGGQHVNKTESAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311
           +P+GVVV+CQ ERSQH N+ +A   L+A+L + E  K    A   ++ K ++G G    +
Sbjct: 249 VPSGVVVECQTERSQHANRDKAMKRLKAQLLDTEHSK--AAAAQAQTRKLQVGSGDRSQR 306

Query: 312 IRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R   +      ++++GDLD  +   L   +
Sbjct: 307 IRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIARLLHEHQ 350


>gi|126172944|ref|YP_001049093.1| peptide chain release factor 1 [Shewanella baltica OS155]
 gi|217974700|ref|YP_002359451.1| peptide chain release factor 1 [Shewanella baltica OS223]
 gi|166223601|sp|A3D0G1|RF1_SHEB5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790896|sp|B8E815|RF1_SHEB2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|125996149|gb|ABN60224.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
           baltica OS155]
 gi|217499835|gb|ACK48028.1| peptide chain release factor 1 [Shewanella baltica OS223]
          Length = 363

 Score =  219 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 110/338 (32%), Positives = 178/338 (52%), Gaps = 9/338 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     D  +  +    + L +E   L++ ++  K  Q    D     E+
Sbjct: 9   LEGLLERNEEVMALLGDASVISDQDRFRALSKEYAQLEDVVAGFKAYQQAQVDLDSAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D         +               Q   L     D  +A++E+ AGAGG E+  
Sbjct: 69  LEEDDAEMREMAQEEMKAAKAKLEHLEDELQILLLPKDPDDDKNAFVEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE  +++ E +  ++GE  G K   + + G   YG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAEANRWQIEIMSCNEGEHGGFKEVIMKVSGDGVYGKLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   V ++  I I+ +D ++DT+R+SGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRVHTSAVTVVVLHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV+CQ +RSQHKN+AQA ++L A++  LE +KR        + ++ +  G   
Sbjct: 249 THIPTGIVVECQDQRSQHKNRAQAMSVLAARIQALEDEKRRSAEE--STRRSLVASGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            ++R+Y   P   V + R N+     ++V++GDLD  +
Sbjct: 307 ERVRTYNF-PQGRVSEHRINLTLYRLNEVMEGDLDAIL 343


>gi|307299656|ref|ZP_07579452.1| peptide chain release factor 1 [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306914708|gb|EFN45098.1| peptide chain release factor 1 [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 360

 Score =  218 bits (556), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 116/351 (33%), Positives = 175/351 (49%), Gaps = 11/351 (3%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            LG + +     +R   +  +   P +  +  +     ++   L   I+   EI     +
Sbjct: 2   DLGKIMEV--FRERFKEVEKELSKPEVASDPDKLMEYGKKHAELSEIINLYSEIDSMKGE 59

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA--DSNDAYLEVHAGAG 126
                E+    ++       +            +     L      D  +  +E+ AG G
Sbjct: 60  LEEWHEMKATAEENEQEVIANTISDLENRIARKELNLKGLLVPDLADERNIIIEIRAGTG 119

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMYTR+AE+  +K+E ++ ++ +  G K     I+G + +  LK E G
Sbjct: 120 GEEAALFAADLFRMYTRYAERNNWKSEIIDSNETDIGGFKEVIFQIRGRSVFSKLKYESG 179

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS +++ V P V ++    I  +D RIDTYR+SGAGGQHVN T
Sbjct: 180 VHRVQRVPTTESGGRIHTSTATVAVLPEVSETEVK-IDPADLRIDTYRSSGAGGQHVNKT 238

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRI H PTG+VV  Q+ERSQH+NKA+A  +LRA+LYE+   K      I E+ +T+I
Sbjct: 239 DSAVRIVHEPTGIVVAVQKERSQHQNKARALEILRARLYEMYSSK--AENEITEARRTQI 296

Query: 307 GWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           G G +   IR+Y   P   V D R N        V+DGDLD+ +    A  
Sbjct: 297 GTGERSEKIRTYNF-PQNRVTDHRINFTSYRLLYVMDGDLDELVTELSAAD 346


>gi|163846312|ref|YP_001634356.1| peptide chain release factor 2 [Chloroflexus aurantiacus J-10-fl]
 gi|222524073|ref|YP_002568544.1| peptide chain release factor 2 [Chloroflexus sp. Y-400-fl]
 gi|163667601|gb|ABY33967.1| peptide chain release factor 2 [Chloroflexus aurantiacus J-10-fl]
 gi|222447952|gb|ACM52218.1| peptide chain release factor 2 [Chloroflexus sp. Y-400-fl]
          Length = 313

 Score =  218 bits (556), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 146/308 (47%), Positives = 204/308 (66%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+    L   ++   +++ R+     L+ELA  E D S+  + +  +Q I+ EV  ++ E
Sbjct: 1   MQRLTRLKEEVTAWNDLERRIASAAELIELAELEGDESLTADLAAEVQAIQREVAQRELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSG  D  DA+L V AG GGT++QDWA MLLRMYTRWAE+R +    +++ +GEEAGI
Sbjct: 61  ILLSGPYDDRDAFLSVQAGMGGTDAQDWAAMLLRMYTRWAERRGYTVNLIDMSEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I+GP AYG+ + E GVHRL+R+SP+++   R TSF+ + V P VDD+ E+EI  
Sbjct: 121 KSATIEIRGPYAYGYARAEAGVHRLIRLSPFNAAHTRQTSFARVEVMPEVDDAPEVEIKP 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D RID +R+ G GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ +N+  A  +LRA+L 
Sbjct: 181 EDLRIDVFRSGGHGGQGVNTTDSAVRITHLPTGIVVTCQNERSQIQNRELAMRVLRARLL 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E ELQ++ E          E  +G Q+R+Y L P  +VKD RT+ E ++   VLDG++D 
Sbjct: 241 ERELQRQAEERARLRGEYREAAFGNQMRTYYLHPSTLVKDHRTDYETSNVQAVLDGEIDP 300

Query: 346 FMKATLAI 353
           F++A L  
Sbjct: 301 FIEAFLRA 308


>gi|160872697|ref|ZP_02062829.1| peptide chain release factor 1 [Rickettsiella grylli]
 gi|159121496|gb|EDP46834.1| peptide chain release factor 1 [Rickettsiella grylli]
          Length = 363

 Score =  218 bits (556), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 106/338 (31%), Positives = 172/338 (50%), Gaps = 9/338 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            VQR   L     +  + ++    + L +E   L   +   ++ Q  L           +
Sbjct: 12  IVQRYEELTALLANIEVIKDQNHFRNLSKEYVQLGPLVQCFQQYQTNLDRLNQAEHCLKD 71

Query: 79  EDDCSILQETSDNLQRIKL---EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           +D         +     +      +  +   L     D  + +LE+ A AGG E+  +A 
Sbjct: 72  KDAIVQELAMEEMKIAQQKKIELEKELEHLLLPQDPNDDRNVFLEIRAAAGGDEAAIFAG 131

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY+R+AE + +  E +  +  E+ G K     I G   Y  LK E G HR+ R+  
Sbjct: 132 DLFRMYSRYAESQHWHVEIIHRNPSEQGGYKEIIARISGTKVYAHLKFESGAHRVQRVPE 191

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            ++  R HTS  ++ + P ++   +I +  SD +IDT+RASGAGGQHV  TDSA+RITH+
Sbjct: 192 TEAQGRVHTSTCTVAILPEIESMDDITLHPSDLKIDTFRASGAGGQHVQKTDSAIRITHL 251

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           P+G+VV+CQ ERSQHKN+A+A ++L+AKL  L  QK ++     E+ +  +G G    +I
Sbjct: 252 PSGLVVECQDERSQHKNRARAMSLLQAKL--LAAQKAKQRREEAETRRDLVGTGDRSERI 309

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           R+Y   P   + D R N+     SD+++G L+  +++ 
Sbjct: 310 RTYNF-PQGRLTDHRINLTLYQLSDIMEGHLEPVIQSL 346


>gi|313158318|gb|EFR57720.1| peptide chain release factor 1 [Alistipes sp. HGB5]
          Length = 361

 Score =  218 bits (556), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 108/346 (31%), Positives = 171/346 (49%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    +      K  DP +  +V +   L +E + L+  I   +  +  L +     ++
Sbjct: 10  LDGLKLKYEETGQKLTDPEVIADVKQFVQLNKEYKELEPIIETSERYRTALANLAEAKDI 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              + D  + +     +  ++  +E  +       +     DS +A +E+  G GG E+ 
Sbjct: 70  LANDKDEEMREMARGEITELEPAIEQMEEQIKLLLIPKDPQDSKNAIMEIRGGTGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMYT++ E + ++ E     DG   G K   L + G N YG LK E GVHR+ 
Sbjct: 130 IFAGDLLRMYTKYIESKGWRYEMTSFSDGAAGGYKEVVLKVTGQNVYGTLKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P  ++     IS +D R D + ASG GGQ VNTT SA+R
Sbjct: 190 RVPQTETQGRVHTSAASVAVLPEAEEFDVE-ISMNDIRKDIFCASGPGGQSVNTTYSAIR 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +THIPTG+VVQCQ ++SQ KN  +A+  LR +++ LE  K  +   I    KT +  G +
Sbjct: 249 LTHIPTGIVVQCQDQKSQLKNFDKAFEELRTRVFNLEYSKYLDE--IASKRKTMVSTGDR 306

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              IR+Y   P   + D R N    + S  +DGD+ D +   +  +
Sbjct: 307 SAKIRTYNY-PQGRITDHRINYTIYNLSAFMDGDIQDVIDHLIVAE 351


>gi|327481907|gb|AEA85217.1| peptide chain release factor 1 [Pseudomonas stutzeri DSM 4166]
          Length = 360

 Score =  218 bits (556), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 117/342 (34%), Positives = 172/342 (50%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  I   +++     D      L
Sbjct: 9   LDILQDRFEELTALLGDAEVISDQNRFRAYSREYAEVEPVIVAYRQLCKVQQDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRI---KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +  +     +      Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LKDSDPDMREMAEEEVAEAKAQLETLEANLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AEK+ ++ E L   +GE  G K     ++G N Y  LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAEKQGWRVEILSESEGEHGGYKEVISRVEGDNVYAKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V P  D+   +EI+ +D RIDTYR+SGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQAAVEINPADLRIDTYRSSGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV+CQ+ERSQHKN+A+A   L AKL +   Q       I E+ K  +G G   
Sbjct: 249 THLPTGIVVECQEERSQHKNRAKALAWLAAKLQD--RQDAAAHKEISETRKLLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            +IR+Y   P   V D R N+   S ++V+ G ++  ++  L
Sbjct: 307 ERIRTYNF-PQGRVTDHRVNLTLYSLNEVIGGAVEQVIEPLL 347


>gi|114330834|ref|YP_747056.1| peptide chain release factor 1 [Nitrosomonas eutropha C91]
 gi|122314234|sp|Q0AHU1|RF1_NITEC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|114307848|gb|ABI59091.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrosomonas
           eutropha C91]
          Length = 359

 Score =  218 bits (556), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 115/350 (32%), Positives = 183/350 (52%), Gaps = 8/350 (2%)

Query: 11  GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
            G+ D       RL  L+    +  +  ++   + L RER  ++    F    Q    D 
Sbjct: 3   KGIVDQLTRLSIRLEELDKLLSNEKITADLDNYRKLSRERSEIEPVTRFYHTYQQVEQDL 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGT 128
              +E++++       +   D  ++   ++E +  + L      D  + +LE+ AG GG 
Sbjct: 63  ATAMEMSVDPQFRDFAEAEIDADKQKLADIETEILKQLLPRDPNDERNIFLEIRAGTGGD 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ES  +A  L RMY+R+AE+  ++ E +  +  E  G K     I G  AY  LK E G H
Sbjct: 123 ESALFAGDLFRMYSRYAEREGWQVEIVSQNPSEVGGYKEIIARIIGHGAYSRLKFESGAH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS  ++ V P  D+   + ++ +D RIDT+RASGAGGQH+N TDS
Sbjct: 183 RVQRVPATETQGRVHTSTCTVAVLPEADEISGVTLNPADLRIDTFRASGAGGQHINKTDS 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+V +CQ+ RSQHKNKAQA ++L +++  L+ Q R + A    + K+ +G 
Sbjct: 243 AVRITHLPTGIVAECQEGRSQHKNKAQAMSVLISRI--LDKQVRAQQAEQAAARKSLVGS 300

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G    +IR+Y   P   + D R N+       ++DG+LD+      A  +
Sbjct: 301 GERSERIRTYNF-PQGRITDHRINLTLYKIEQIMDGELDELCSTLAAEHQ 349


>gi|125975076|ref|YP_001038986.1| peptide chain release factor 1 [Clostridium thermocellum ATCC
           27405]
 gi|256003270|ref|ZP_05428262.1| peptide chain release factor 1 [Clostridium thermocellum DSM 2360]
 gi|281418506|ref|ZP_06249525.1| peptide chain release factor 1 [Clostridium thermocellum JW20]
 gi|166223552|sp|A3DIL4|RF1_CLOTH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|125715301|gb|ABN53793.1| bacterial peptide chain release factor 1 (bRF-1) [Clostridium
           thermocellum ATCC 27405]
 gi|255992961|gb|EEU03051.1| peptide chain release factor 1 [Clostridium thermocellum DSM 2360]
 gi|281407590|gb|EFB37849.1| peptide chain release factor 1 [Clostridium thermocellum JW20]
 gi|316939241|gb|ADU73275.1| peptide chain release factor 1 [Clostridium thermocellum DSM 1313]
          Length = 360

 Score =  218 bits (556), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 120/330 (36%), Positives = 181/330 (54%), Gaps = 12/330 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+ +  A  R   +N +  DP +  N  E K LM+E   L+  ++   E +    +   
Sbjct: 1   MFEKFQAAENRYDEINHRLSDPAVIANQDEYKKLMKEHAELEVLVTKYNEYKKLTKEIAD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             E+  E+ D    +     L+  + +     +  +   L     D  +  +E+  GAGG
Sbjct: 61  AKEMLNEKLDKEFREMVETELKEAQEKLEVLKKEMKILLLPKDPNDERNVIVEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE+  +KTE L+ +  E  G K     I+G  AY  LK E GV
Sbjct: 121 DEAALFAGDLFRMYTRYAERNGWKTEILDSNPTEIGGFKEVVFSIEGNGAYSRLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++N R HTS  ++ V P   + I++EI+ +D RIDTYRASGAGGQH+N TD
Sbjct: 181 HRVQRVPVTEANGRVHTSTVTVAVLP-EAEEIDVEINPNDLRIDTYRASGAGGQHINKTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SA+RITH+PTG+VV CQ +RSQHKNK +A  +LR+KLYE+  +++     I +  K+++G
Sbjct: 240 SAIRITHLPTGLVVCCQDQRSQHKNKEKAMKVLRSKLYEMAREQQ--HNEIAQERKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTS 334
            G    +IR+Y   P   V D R  +    
Sbjct: 298 TGDRSERIRTYNF-PQGRVTDHRIGLTLYK 326


>gi|288554407|ref|YP_003426342.1| peptide chain release factor 1 [Bacillus pseudofirmus OF4]
 gi|288545567|gb|ADC49450.1| peptide chain release factor 1 [Bacillus pseudofirmus OF4]
          Length = 356

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 108/351 (30%), Positives = 177/351 (50%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D   +   R + LN    DP +  +  + +   +E+  ++  +   +E ++ +     
Sbjct: 1   MLDRLQSVEDRYNRLNELLSDPDIISDSKKLREFSKEQSDIEETVQAYREYKEVVSQYKD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
              +  ++ D  +     + +  +    E  +       L     D  +  +E+   AGG
Sbjct: 61  AKAMLEDKLDDEMYAMVKEEMDELSTRQEELEARLKILLLPKDPNDDKNVIVEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+Q +A  L +MY+R+AE + +KTE +E    E  G K     + G  AY  LK E G 
Sbjct: 121 DEAQLFAGDLYKMYSRFAEAQGWKTEVIEATSTELGGYKEIIFSVNGAGAYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +E+EI E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPQTESGGRIHTSTATVAVLP-EAEEVEVEIHEKDIRVDTFTSSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG VV CQ E+SQ KNK +A  +LRA++Y+    +RE  A   ++ K  +G
Sbjct: 240 SAVRLTHLPTGTVVSCQDEKSQIKNKEKAMKVLRARVYDKV--QREVQAEYDQNRKLAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L G LD+ + A +  ++
Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTIQKLEQILQGKLDEVIDALIVEEQ 347


>gi|116511384|ref|YP_808600.1| peptide chain release factor 1 [Lactococcus lactis subsp. cremoris
           SK11]
 gi|123125765|sp|Q031E4|RF1_LACLS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116107038|gb|ABJ72178.1| bacterial peptide chain release factor 1 (bRF-1) [Lactococcus
           lactis subsp. cremoris SK11]
          Length = 357

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 102/352 (28%), Positives = 176/352 (50%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---D 68
           +FD  ++ V R   L     DP +  +      L RE   L + ++   E +  L    D
Sbjct: 1   MFDQLESIVGRYEELGELLSDPEVVSDTKRFMELSREEADLRDKVATYNEYKKVLETISD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAG 126
           +  +L     +D+   + +   +  + + EV  ++ + LL  +  +   +  LE+   AG
Sbjct: 61  SEEMLGEGGLDDEMKEMLKEELSSAKSQKEVLEEEIKILLLPKDPNDGKNIILEIRGAAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  LL MY  ++E + +K E +E +     G K  + LI GP+ Y  LK E G
Sbjct: 121 GDEAALFAGDLLNMYQHFSESQGWKFEIMEANITGIGGYKEVSALISGPSVYSKLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   ++  R HTS +++ V P V++     I + D R+D Y ASGAGGQ+VN  
Sbjct: 181 AHRVQRVPVTETQGRVHTSTATVLVMPEVEEFEMT-IEQKDLRVDIYHASGAGGQNVNKV 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            +AVR+ H+PTG+ V+ Q+ER+Q KN+ +A  +L  K+++    ++ E+       K+ +
Sbjct: 240 ATAVRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYY--QQIELDKQNAERKSTV 297

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 298 GTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKMDEVIDALIVYDQ 348


>gi|288819151|ref|YP_003433499.1| peptide chain release factor 1 [Hydrogenobacter thermophilus TK-6]
 gi|288788551|dbj|BAI70298.1| peptide chain release factor 1 [Hydrogenobacter thermophilus TK-6]
 gi|308752735|gb|ADO46218.1| peptide chain release factor 1 [Hydrogenobacter thermophilus TK-6]
          Length = 357

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 110/340 (32%), Positives = 177/340 (52%), Gaps = 8/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +  +     + ++  +   L ++ + +   +   +  +    D     EL
Sbjct: 10  LEAIEKRYEEIQNRLSSQDVIRDRAQFAKLSKDLKDIGEVVDLYRRYKKVQKDIKEAQEL 69

Query: 76  ALEEDDCSILQETS-DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
               +   + +E      +  +   +  +   L   E DS +  LE+ AG GG E+  + 
Sbjct: 70  LKSREFEELAKEEIKRLKREEERIEKELKILMLPKDERDSRNVILEIRAGVGGEEAALFV 129

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LL MY ++AE+R +K   L  +     G K    LI+G  AY  LK E GVHR+ RI 
Sbjct: 130 ADLLNMYQKYAEERGWKFSILSANRTGLGGYKEVIALIEGVGAYSRLKYESGVHRVQRIP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P VD++    I+  D +I+T+RASGAGGQ+VNTT++AVR+TH
Sbjct: 190 RTESGGRIHTSTATVAVLPEVDETELE-INPQDLKIETFRASGAGGQYVNTTETAVRVTH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+ V CQ ERSQ +NK +A  +L A+L +   +++EE   I +  K ++G G +   
Sbjct: 249 IPTGISVACQDERSQFQNKQKALKILYARLKDFYERQKEEE--IAKERKMQVGTGERSEK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IR+Y   P   V D R N+      DVL+G LD+ ++A +
Sbjct: 307 IRTYNF-PQGRVTDHRINLTLYKLHDVLEGKLDEIIEALI 345


>gi|313678949|ref|YP_004056688.1| bacterial peptide chain release factor 1 (brf-1) [Oceanithermus
           profundus DSM 14977]
 gi|313151664|gb|ADR35515.1| bacterial peptide chain release factor 1 (bRF-1) [Oceanithermus
           profundus DSM 14977]
          Length = 358

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 110/348 (31%), Positives = 176/348 (50%), Gaps = 9/348 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D      +    L  +  DP +  +    +   R    L   I   +  +    +   
Sbjct: 1   MLDKLKKLEEEYRALERELGDPEVLADAARFREKSRRYAELGEVIEAFRAYRRVQDELEQ 60

Query: 72  LLELALEED-DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             ELA + +      +E ++  +++    +  +   L    AD  +A +E+ AG GG E+
Sbjct: 61  ARELAADPELGEMAREEAAELEEKLGELEKKLELLLLPRDPADVRNAIVEIRAGTGGQEA 120

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L  MYTR+AE+  ++ E LE H  +  G    + ++KGP AYG  K E GVHR+
Sbjct: 121 ALFAGNLFEMYTRYAERLGYQVEMLESHPTDLGGFSKVSFMVKGPGAYGTFKYESGVHRV 180

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P  ++S    +  S+ RID  RASG GGQ VNTTDSAV
Sbjct: 181 QRVPATETQGRIHTSTATVAVLPEAEESDVE-LDMSEVRIDVMRASGPGGQGVNTTDSAV 239

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+ H PTG+++  Q  RSQ KN+ +A ++LR++L  LE+++ EE A +  S   +IG G 
Sbjct: 240 RVVHEPTGIIITIQDSRSQIKNREKALSILRSRL--LEMKRAEEEAALRTSRLAQIGTGE 297

Query: 311 Q---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +   IR+Y   P   V D R +    +   VL G+LD+  +A     +
Sbjct: 298 RSEKIRTYNF-PQSRVTDHRIHFTTHNLEGVLAGELDELTEALKKADQ 344


>gi|269123393|ref|YP_003305970.1| peptide chain release factor 1 [Streptobacillus moniliformis DSM
           12112]
 gi|268314719|gb|ACZ01093.1| peptide chain release factor 1 [Streptobacillus moniliformis DSM
           12112]
          Length = 358

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 115/347 (33%), Positives = 182/347 (52%), Gaps = 10/347 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V++   +N       +  +  +     +    +   +      + +        E 
Sbjct: 5   LDEVVEKYEEINRLLMSQEVLSDPKKLMEYNKTLSQMSEIVEKYLLYKSKKEALEQYKEE 64

Query: 76  ALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +L+  +  +      I    E  +   L     D  +  +E+ AGAGG E+ 
Sbjct: 65  VKSEKDEEMLEMLNMEIDTIEEEIPRLEEELKILLLPKDPNDEKNVIVELRAGAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            + + + RM+TR+AE+ K+KTE ++ ++    G+K  T LI G  AY  LK E GVHR+ 
Sbjct: 125 LFVSDIFRMFTRYAERNKWKTEIIDKNEIGVGGLKEITFLISGKGAYSRLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS  ++ V P +DD  ++ I+ SD +IDTYR+SGAGGQHVNTTDSAVR
Sbjct: 185 RVPDTEASGRIHTSTITVAVLPEIDDVEQVAINPSDLQIDTYRSSGAGGQHVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH PTG+VV  Q  RSQ KNK  A  +L +KLYE+E++K+   +++    ++++G G  
Sbjct: 245 ITHKPTGIVVTSQDGRSQIKNKEAAMKVLASKLYEIEVEKQR--SSVEAERRSQVGTGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +LDG LD+ + A +A  +
Sbjct: 303 SEKIRTYNY-PQGRVTDHRIKLTLHRLDAILDGALDEIIDALIAFNQ 348


>gi|258406203|ref|YP_003198945.1| peptide chain release factor 1 [Desulfohalobium retbaense DSM 5692]
 gi|257798430|gb|ACV69367.1| peptide chain release factor 1 [Desulfohalobium retbaense DSM 5692]
          Length = 356

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 118/350 (33%), Positives = 183/350 (52%), Gaps = 11/350 (3%)

Query: 13  LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL---CD 68
           +F   D+  +R + +  +     + Q+      L +    L   IS  +E ++ L    +
Sbjct: 1   MFAKLDSIEERYAEIEQELSSSDVLQDQQRYAELAKAHADLGEIISVYREYKEVLTGIEE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           N  +L    +E      +E S    R +      Q   L     D  +  LE+ AG GG 
Sbjct: 61  NQDVLSDGDQELRELAKEELSALETRQEELHARLQKLLLPKDPMDDKNIILEIRAGTGGE 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +   LLRMYTR+AE   +K E +  H     G+K     I G + Y  LK E GVH
Sbjct: 121 EAALFVADLLRMYTRYAETMHWKVELMNSHPTGSGGMKEVIASISGASVYSRLKYESGVH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ + P   + +++EI  S+ RID +RASG GGQ VNTTDS
Sbjct: 181 RVQRVPSTESQGRIHTSAVTVAILP-EAEEVDVEIDPSELRIDYFRASGPGGQSVNTTDS 239

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITHIP+GVVV CQ E+SQHKNKA+A  +LR+++  L+ ++ E    +  S ++++G 
Sbjct: 240 AVRITHIPSGVVVSCQDEKSQHKNKAKAMKVLRSRI--LKAKQEEAKKELDASRRSQVGS 297

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G    +IR+Y   P   + D R N+   S  +VL G++D+ ++  +   +
Sbjct: 298 GDRSERIRTYNF-PQGRITDHRINLTLYSLENVLAGNMDEVIEPLVQHDQ 346


>gi|78185965|ref|YP_374008.1| peptide chain release factor 1 [Chlorobium luteolum DSM 273]
 gi|119361573|sp|Q3B6R6|RF1_PELLD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78165867|gb|ABB22965.1| bacterial peptide chain release factor 1 (bRF-1) [Chlorobium
           luteolum DSM 273]
          Length = 358

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 106/352 (30%), Positives = 173/352 (49%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   +  +R   L     DP    +    + L +E   L   +               
Sbjct: 1   MFDKLQSIKERHLDLERMLADPAAAGDQTRFRRLNKEYSDLKEIVQAYDRYASARQQLEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
              +   E+D  +     + +  ++  +   +       L   EADS +  +E+ AG GG
Sbjct: 61  SRHMQKAEEDPEMKAMAREEMLELEERIPGLEQELRILLLPKDEADSRNVIMEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDG-EEAGIKSATLLIKGPNAYGWLKGEQG 186
            E+  +A  L+RMY R+AE++ ++ E L+ ++     G +  TL I G + YG LK E G
Sbjct: 121 EEAALFAADLMRMYQRYAERQGWRCEVLDYNESSGPGGFREVTLTISGHDVYGTLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +S+ V P   + +++EI   D R DTYR+ G GGQ+VN  
Sbjct: 181 VHRVQRVPETETQGRIHTSAASVAVLP-EAEEVDVEIRRDDLRFDTYRSGGKGGQNVNKV 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++AVRITH PTG+V  CQ+ERSQ +NK +A  ML AKLY+++LQ++++        +T +
Sbjct: 240 ETAVRITHEPTGLVAACQEERSQLQNKERAMKMLMAKLYDIKLQEQQQERADM--RRTMV 297

Query: 307 GWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             G +   IR+Y   P   V D R           + G++ + + A     +
Sbjct: 298 ASGDRSAKIRTYNY-PQSRVTDHRIGFTSHGLPHFMQGEIGELIDALKMHDQ 348


>gi|163787722|ref|ZP_02182169.1| peptide chain release factor 1 [Flavobacteriales bacterium ALC-1]
 gi|159877610|gb|EDP71667.1| peptide chain release factor 1 [Flavobacteriales bacterium ALC-1]
          Length = 358

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 95/346 (27%), Positives = 169/346 (48%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72
                QR   +N     P +  +      LM+E +     +      KE  D + +   +
Sbjct: 5   IQIIKQRFDEVNDLIIQPDIISDQKRYAKLMKEYKDFKLIVDKGAVYKEALDNVAEAEEI 64

Query: 73  LELALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +    +++   + +   D     I+   E  +F  +     D+ +  +EV AG GG E+ 
Sbjct: 65  ITDGSDDEMVEMAKMQLDEAKDTIEKLEEEIRFMLIPKDPDDAKNVVVEVRAGTGGDEAS 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++   + ++ + +   DG   G K     + G + YG LK E GVHR+ 
Sbjct: 125 IFAGDLFRMYSKYCSDKGWRVDVVSQSDGTSGGFKEVIFEVSGEDVYGTLKFEAGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P  ++    E+  ++ RI+   ++G GGQ VNTT SA++
Sbjct: 185 RVPQTETQGRVHTSAATVMVLPEAEEFD-YELDMTEVRIERTTSTGPGGQSVNTTYSAIK 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           + H PTG++V CQ ++S HKN  +A  +LR++LYE EL KR+  A   E  K+ +  G +
Sbjct: 244 LHHEPTGMIVSCQDQKSSHKNLEKALKVLRSRLYERELAKRQ--AADSEKRKSMVSSGDR 301

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              IR+Y   P   V D R  +     +++++GD+   +   +  +
Sbjct: 302 SAKIRTYNY-PQGRVTDHRIGLTLYDLTNIINGDIQKIIDELMLAE 346


>gi|254497857|ref|ZP_05110623.1| peptide chain release factor 1 [Legionella drancourtii LLAP12]
 gi|254352935|gb|EET11704.1| peptide chain release factor 1 [Legionella drancourtii LLAP12]
          Length = 351

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 114/338 (33%), Positives = 175/338 (51%), Gaps = 9/338 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            ++R   +     +  +  +  + K L +E   L+   +  +   D   +   L E+   
Sbjct: 1   MLERFQEVGRLLSEASVIADQNQFKALSKEYAQLEPVATCYETYLDAQNNLASLQEMLAG 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESL---LSGEADSNDAYLEVHAGAGGTESQDWAN 135
           +D         +     K   E  +            D  + YLEV AG GG E+  +A 
Sbjct: 61  DDQELATMAEDELEDAQKQIDELDEQLQWHLIPKDPDDERNIYLEVRAGTGGDEAAIFAG 120

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY+R+AE + ++ E +    GE  G K     I G   Y  LK E G HR+ R+  
Sbjct: 121 DLYRMYSRYAENQGWQLELISASHGEHGGYKEIIARISGNAVYSQLKFESGAHRVQRVPD 180

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ V P V++  +I+I+  D RIDTYR+SGAGGQHVN TDSA+RITHI
Sbjct: 181 TESQGRVHTSACTVAVMPEVEEIDDIQINTDDLRIDTYRSSGAGGQHVNKTDSAIRITHI 240

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTGVVV+CQ ERSQHKN+A+A ++L+ +L + E  K+++     ++ K+ +G G    +I
Sbjct: 241 PTGVVVECQDERSQHKNRAKAMSLLKTRLLDAEQSKQKKEQ--AQTRKSLVGSGDRSERI 298

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           R+Y   P   + D R N+      DV++G+L   ++  
Sbjct: 299 RTYNY-PQGRLTDHRINLTIYQLGDVMEGNLALVVEPL 335


>gi|126725348|ref|ZP_01741190.1| peptide chain release factor 1 [Rhodobacterales bacterium HTCC2150]
 gi|126704552|gb|EBA03643.1| peptide chain release factor 1 [Rhodobacterales bacterium HTCC2150]
          Length = 421

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 119/342 (34%), Positives = 170/342 (49%), Gaps = 13/342 (3%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
               R  FL  K               L RE   L      I   Q  + D      +  
Sbjct: 80  QITARFEFLEAKLASGE----TDNIVELSREYSELKPVADQIMAFQTLVQDIDAAEAMLD 135

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS-NDAYLEVHAGAGGTESQDWANM 136
           + +   +  E    L+    + E      LL  +      A +E+  G GG E+  +A  
Sbjct: 136 DPEMRELAAEELKELRDSLPDAENAIKLVLLPKDTADARPAIIEIRPGTGGDEAALFAGD 195

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           LLRMY R+AE   +K E +E    E  GIK     IKG N +G LK E GVHR+ R+   
Sbjct: 196 LLRMYQRYAESNGWKFEIIEEQVSELGGIKEIIANIKGTNVFGKLKFESGVHRVQRVPTT 255

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS +++ V P   + ++++I  SD RIDT RASGAGGQHVNTTDSAVRITH+P
Sbjct: 256 ESGGRIHTSAATVAVLP-EAEEVDLDIPASDLRIDTMRASGAGGQHVNTTDSAVRITHLP 314

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG++V    E+SQH+N+  A  ++R++LYE+E QK  +        K+++G G    +IR
Sbjct: 315 TGMIV-VSMEKSQHRNREIAMQVMRSRLYEMERQKVADER--AADRKSQVGSGDRSERIR 371

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   + D R N+       V+ G+LD+ + A  A  +
Sbjct: 372 TYNF-PQGRMTDHRINLTLYKLDQVMSGELDEIIDALHADDQ 412


>gi|28198320|ref|NP_778634.1| peptide chain release factor 2 [Xylella fastidiosa Temecula1]
 gi|71897686|ref|ZP_00679931.1| Peptide chain release factor 2 [Xylella fastidiosa Ann-1]
 gi|182680959|ref|YP_001829119.1| peptide chain release factor 2 [Xylella fastidiosa M23]
 gi|28056390|gb|AAO28283.1| peptide chain release factor 2 [Xylella fastidiosa Temecula1]
 gi|71732589|gb|EAO34642.1| Peptide chain release factor 2 [Xylella fastidiosa Ann-1]
 gi|182631069|gb|ACB91845.1| peptide chain release factor 2 [Xylella fastidiosa M23]
 gi|307579427|gb|ADN63396.1| peptide chain release factor 2 [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 302

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 159/290 (54%), Positives = 216/290 (74%), Gaps = 1/290 (0%)

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           + + +    L+LA  E D  +LQ   +++   +L+VE  +F+ + SG+ D  +A++++ A
Sbjct: 3   NGVAEASEFLDLAEIEQDQEMLQAVLNDVDIYQLQVEKLEFQRMFSGKMDGANAFVDIQA 62

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDWA MLLRMY RWAE R +K E LE+  GE AGIKSAT  ++G  AYGWLK 
Sbjct: 63  GAGGTEAQDWAEMLLRMYLRWAEGRGWKAELLEVSGGEVAGIKSATFRVEGDFAYGWLKT 122

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS++RRHTSF+S++V P VDD+I+IEI+ +D + D YR+SGAGGQHV
Sbjct: 123 ETGVHRLVRKSPFDSDNRRHTSFTSVFVSPEVDDNIDIEINPADLKTDVYRSSGAGGQHV 182

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRITH+P+G+VV CQ ERSQH N+ +A  ML AKLYE E+QKR    ++ E+SK
Sbjct: 183 NKTESAVRITHVPSGIVVACQTERSQHANRDRAMKMLAAKLYESEIQKRNAEKDVLEASK 242

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           ++IGWG QIR+YVL     +KDLRT +E++    VLDGDLD+F++A+L  
Sbjct: 243 SDIGWGSQIRNYVLD-QSRIKDLRTGVERSDTQKVLDGDLDEFIEASLKA 291


>gi|315641825|ref|ZP_07896829.1| peptide chain release factor RF1 [Enterococcus italicus DSM 15952]
 gi|315482500|gb|EFU73039.1| peptide chain release factor RF1 [Enterococcus italicus DSM 15952]
          Length = 357

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 103/347 (29%), Positives = 172/347 (49%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72
                 R   L     DP +  +      L +E  +    ++  +  +     + D   L
Sbjct: 5   LQAIADRYEELGELLSDPAVVSDTKRFMELSKEEANTRETVATYRRYKEVVQGIADAEEL 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L   L+ +   + +E   +L++ K  +E   +   L     D  +  +E+   AGG E+ 
Sbjct: 65  LGENLDAEMAELAKEELSDLKKEKEVLEDTIKILLLPKDPNDDKNIIMEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY R+AE + ++ E ++ +     G K   ++I G N +  LK E G HR+ 
Sbjct: 125 LFAGDLFNMYQRYAESQGWRVEVMDANITGIGGYKEVIMMITGDNVFSKLKYESGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +E+++++ D R+D Y ASGAGGQHVN T SAVR
Sbjct: 185 RVPSTESQGRIHTSTATVVVMP-EAEEVELDLADKDIRVDIYHASGAGGQHVNKTASAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q ERSQ KN+ +A  +LRA++Y+    + E  +    + K+ +G G  
Sbjct: 244 LTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYD--QLQHEAQSEYDANRKSAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIIDALVLYDQ 347


>gi|157148427|ref|YP_001455746.1| hypothetical protein CKO_04252 [Citrobacter koseri ATCC BAA-895]
 gi|157085632|gb|ABV15310.1| hypothetical protein CKO_04252 [Citrobacter koseri ATCC BAA-895]
          Length = 293

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 169/290 (58%), Positives = 206/290 (71%), Gaps = 1/290 (0%)

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ A
Sbjct: 3   QGLEDVSGLLELAVEADDEETFNEAVAELDTLEEKLAQLEFRRMFSGEYDSADCYLDIQA 62

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIKS T+ I G  AYGWL+ 
Sbjct: 63  GSGGTEAQDWASMLERMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKISGEYAYGWLRT 122

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHV
Sbjct: 123 ETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHV 182

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K
Sbjct: 183 NRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNK 242

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           ++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 243 SDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 291


>gi|120600166|ref|YP_964740.1| peptide chain release factor 1 [Shewanella sp. W3-18-1]
 gi|146291906|ref|YP_001182330.1| peptide chain release factor 1 [Shewanella putrefaciens CN-32]
 gi|166223604|sp|A4Y3J8|RF1_SHEPC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223606|sp|A1RNE1|RF1_SHESW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|120560259|gb|ABM26186.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp.
           W3-18-1]
 gi|145563596|gb|ABP74531.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
           putrefaciens CN-32]
 gi|319425197|gb|ADV53271.1| peptide chain release factor 1 [Shewanella putrefaciens 200]
          Length = 363

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 110/346 (31%), Positives = 181/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     D  +  +    + L +E   L+  ++  K  Q    D     E+
Sbjct: 9   LEGLLERNEEVLALLGDASVIADQDRFRALSKEYSQLEEVVAGFKAYQQAQADLDSAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRI---KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D         +        +      Q   L     D  +A++E+ AGAGG E+  
Sbjct: 69  LEEDDAEMREMAQEEMKAAKAELERLESELQILLLPKDPNDDTNAFIEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE  +++ E +  ++GE  G K   + + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAEANRWQMEVMSCNEGEHGGFKEIIVKVSGEGAYGKLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   V ++  I I+ +D ++DT+R+SGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRVHTSAVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV+CQ +RSQHKN+AQA ++L A++  +E +KR        + ++ +  G   
Sbjct: 249 THIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEE--STRRSLVASGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            ++R+Y   P   V + R N+     ++V++GDLD  +   +   +
Sbjct: 307 ERVRTYNF-PQGRVSEHRINLTLYRLNEVMEGDLDAILTPLMQEHQ 351


>gi|259418822|ref|ZP_05742739.1| peptide chain release factor 1 [Silicibacter sp. TrichCH4B]
 gi|259345044|gb|EEW56898.1| peptide chain release factor 1 [Silicibacter sp. TrichCH4B]
          Length = 444

 Score =  218 bits (556), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 175/344 (50%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +QR  +L     D            L +E   L      I+  +  L D     E+
Sbjct: 101 LEQILQRYQYLEAAMADGAGGD----IAKLAKEYSDLRPVAEQIRAYRQLLSDLAEAEEM 156

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  ++ +E    L+          Q   L   EADS  A LE+  G GG E+  +A
Sbjct: 157 LADPDMKALAEEEIPTLKAALPEAEHALQLALLPKDEADSRAAILEIRPGTGGDEAALFA 216

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE + +K + +E    E  G+K     I G   +  LK E GVHR+ R+ 
Sbjct: 217 GDLYRMYSRYAEAQGWKIDVIEEQVSELGGLKELVARINGDGVFARLKYESGVHRVQRVP 276

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++I+I  +D RIDT R+SGAGGQHVNTTDSAVRITH
Sbjct: 277 VTESGGRIHTSAATVAVLP-EAEDVDIKIDANDLRIDTMRSSGAGGQHVNTTDSAVRITH 335

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV    E+SQH+N+  A  +L+ +LY+LE Q+ +          +++G G    +
Sbjct: 336 LPTGLVVTSS-EKSQHRNREIAMQVLKTRLYDLERQRIDSER--SADRASQVGSGDRSER 392

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++ GDLD+ + A ++  +
Sbjct: 393 IRTYNF-PQGRMSDHRINLTLYKLEQIMGGDLDEIIDALISEHQ 435


>gi|91202802|emb|CAJ72441.1| strong similarity to protein chain release factor 2 (RF-2)
           [Candidatus Kuenenia stuttgartiensis]
          Length = 316

 Score =  218 bits (556), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 144/296 (48%), Positives = 205/296 (69%)

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           ++E+Q    +   L++L  EE D     E   ++     ++E  +  ++L    D  +AY
Sbjct: 3   LQELQKTYEEIEFLVDLMDEESDERTTAEIVGDIALFTQKLEKLELHTMLGEAHDHCNAY 62

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           L ++AGAGGTES DW +ML RMY+RWAEK       ++   GEEAG+K  T+LI+G   Y
Sbjct: 63  LSIYAGAGGTESCDWVSMLFRMYSRWAEKNGHTLSLIDSLAGEEAGLKRITVLIEGEYVY 122

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G LK E GVHRLVRISP+DSN+RRHTSF+++ V P +++  EIEI++++ ++DTYR+SGA
Sbjct: 123 GHLKSEIGVHRLVRISPFDSNARRHTSFAAVDVLPEIEEEEEIEINDNELQVDTYRSSGA 182

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVN T SAVRITH+PTG+V+ CQ ERSQH+N+ +A NML+AK+Y+++ +++E   + 
Sbjct: 183 GGQHVNKTSSAVRITHLPTGIVIACQSERSQHQNRRRAINMLKAKIYQIKEKEKERELSA 242

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               K EI WG QIRSYVLQPY +VKDLRT  E  +   +LDG+++ F++A L  K
Sbjct: 243 AYDEKGEIAWGNQIRSYVLQPYSLVKDLRTGKESGNTQAMLDGEIEGFIEAYLKWK 298


>gi|269468531|gb|EEZ80185.1| Protein chain release factor A [uncultured SUP05 cluster bacterium]
          Length = 363

 Score =  218 bits (556), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 114/346 (32%), Positives = 184/346 (53%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    RL  +     DP +  +  + + L  E   L       ++      D     E+
Sbjct: 9   LEQLSMRLEEVGALLSDPDVAADQNKFRELSIEHAQLTPINEQFEKYLSTQKDIESSEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            LE+D+        +  +  +         +   L     DS +  +E+ AG GG E+  
Sbjct: 69  LLEDDEEIKTMAKEEITEGKEKLEYLDLELKKALLPKDPNDSRNIIIEIRAGTGGDEASI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+ EK+K++ EA+  + G+  G K     I G N Y  LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYVEKQKWQMEAMSSNIGDHGGFKEVIARISGTNVYSKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ + P V++  E++I+ SD RIDT+RASGAGGQHVN TDSAVR+
Sbjct: 189 VPETESQGRVHTSACTVAIMPEVENIEEVDINMSDVRIDTFRASGAGGQHVNKTDSAVRV 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR-- 310
           THIPTG VV+CQ  RSQHKNKAQA ++L +++ + + Q++++   +  + K  IG G   
Sbjct: 249 THIPTGTVVECQDGRSQHKNKAQALSVLASRILDAQQQEQQKEQAL--TRKELIGSGDRS 306

Query: 311 -QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N+     ++V++GDL+  ++  +  ++
Sbjct: 307 QRIRTYNY-PQGRITDHRINLTLYKLAEVMEGDLEAIIEPLIVEQQ 351


>gi|51891274|ref|YP_073965.1| peptide chain release factor 2 [Symbiobacterium thermophilum IAM
           14863]
 gi|51854963|dbj|BAD39121.1| peptide chain release factor 2 [Symbiobacterium thermophilum IAM
           14863]
          Length = 308

 Score =  218 bits (556), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 151/300 (50%), Positives = 211/300 (70%), Gaps = 1/300 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  ++  + RL D  ++++LA E  D  +  E       ++ +V   + + LL+G+ D+ 
Sbjct: 1   MEQLESFRRRLDDLEVMIDLAEEASDAEMAAEARAEADALEEQVRQFELQVLLNGKYDAY 60

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +A L +HAGAGGTE+QDWA MLLRMY RWAE+R FK E L+  DG+EAGIKS T+ ++GP
Sbjct: 61  NAILTIHAGAGGTEAQDWAEMLLRMYVRWAERRGFKVEELDRLDGDEAGIKSVTIAVRGP 120

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYR 234
            AYG+L+ E GVHRLVRISP+D++ RRHTSF+++ V P ++D   +IEI   D RIDT+R
Sbjct: 121 YAYGFLRPEMGVHRLVRISPFDASGRRHTSFAAVEVMPEIEDDVDDIEIRPEDLRIDTFR 180

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +SGAGGQHVN T+SAVRITH+PTG+VV CQQERSQ +N+A A  MLR+KL EL+++++ +
Sbjct: 181 SSGAGGQHVNKTESAVRITHLPTGIVVSCQQERSQMQNRAVAMMMLRSKLVELKIEEQNK 240

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                   + EI WG QIRSYV QPY +VKD R+ +E  +   V+DG+LD F+   L  +
Sbjct: 241 EMAQIRGPQMEIAWGSQIRSYVFQPYTLVKDHRSGVEVGNAQAVIDGELDPFIYGYLEKR 300


>gi|332885310|gb|EGK05561.1| peptide chain release factor 1 [Dysgonomonas mossii DSM 22836]
          Length = 361

 Score =  218 bits (556), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 101/346 (29%), Positives = 170/346 (49%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   +     DP +  ++     L +E + L+      +E +  L        +
Sbjct: 10  LDALNIRFEEIGKLITDPAVIADMKRYVKLNKEYRDLEKIDIARREYKQLLATIEEAKGI 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              EDD  + +   + +      +   +    F  + +   DS +A +E+  G GG E+ 
Sbjct: 70  LENEDDSELREIAKEEMDAANERMPKLEEEIKFLLVPADPQDSKNAIMEIRGGTGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + +KTE   + +G   G K     + G   YG LK E GVHR+ 
Sbjct: 130 IFAGDLYRMYQKYCEIKGWKTEITSVTEGTSGGFKEIIFTVTGEGVYGILKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + ++++I+ +D  + T R+SGAGGQ+VN  ++ V+
Sbjct: 190 RVPATETQGRVHTSAATVAVLP-EAEEVDVDINPADIEMQTARSSGAGGQNVNKVETKVQ 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +TH P+G+VV CQQ RSQ  N+  A  MLR KLY++EL K  +   I    KT +  G +
Sbjct: 249 LTHKPSGLVVVCQQSRSQLANRELAMQMLRTKLYDIELSKYMD--AIASKRKTMVSTGDR 306

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              IR+Y   P   + D R N+   + S V+DG++   +   +  +
Sbjct: 307 SAKIRTYNY-PQGRMTDHRINLTMYNLSAVMDGEIQPIIDQLIIAE 351


>gi|145218953|ref|YP_001129662.1| peptide chain release factor 1 [Prosthecochloris vibrioformis DSM
           265]
 gi|189039984|sp|A4SCF1|RF1_PROVI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145205117|gb|ABP36160.1| bacterial peptide chain release factor 1 (bRF-1) [Chlorobium
           phaeovibrioides DSM 265]
          Length = 357

 Score =  218 bits (556), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 104/352 (29%), Positives = 177/352 (50%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   +  +R   L     DP    +    + L +E   L   +               
Sbjct: 1   MFDNLQSIKERHLDLERLLADPDAAGDQTRFRKLNKEYSDLREIVETYDRYSHIKKQLED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
             +L   E D  +     + ++ ++ ++   + E         EADS +  LE+ AG GG
Sbjct: 61  SRQLLKNEQDQEMKALVEEEIEELQRQIPALEQEIKVLLLPKDEADSRNVILEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNAYGWLKGEQG 186
            E+  +   L RMY R+AEK+ +  + L+ ++     G + AT+ I G + +G +K E G
Sbjct: 121 EEAALFTTDLFRMYQRYAEKQGWNFQMLDYNESSVPGGFREATISITGHDVFGTMKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +S+ V P   + +++EI + D R+DTYR+ G GGQ+VN  
Sbjct: 181 VHRVQRVPDTETQGRIHTSAASVAVLP-EAEEVDVEIRKEDLRLDTYRSGGKGGQNVNKV 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++AVRITH+PTG+V  CQ+ERSQ +NK +A  MLRAKL++++L ++++        +T +
Sbjct: 240 ETAVRITHMPTGMVAACQEERSQLQNKERAMKMLRAKLFDIQLAEQQQARADL--RRTMV 297

Query: 307 GWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             G +   IR+Y   P   V D R      +    + G++ + + A     +
Sbjct: 298 ATGDRSAKIRTYNY-PQSRVTDHRIGFTTHALPQFMQGEIGELIDALKMHDQ 348


>gi|258544629|ref|ZP_05704863.1| peptide chain release factor 1 [Cardiobacterium hominis ATCC 15826]
 gi|258520137|gb|EEV88996.1| peptide chain release factor 1 [Cardiobacterium hominis ATCC 15826]
          Length = 360

 Score =  218 bits (555), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 176/341 (51%), Gaps = 11/341 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLIL 72
             +  +R   LN     P    +  + +   +E   L   I+ + +   ++ +L D   L
Sbjct: 9   LASLRERYDELNGLLALPETAADPDQLRRYAQEHAQLAPVIAILDDTEALERQLADLADL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
                  +  +  +   +           +    +     D  D YLE+ AG GG E+  
Sbjct: 69  ETDPEMAELAAAERPALEAQIAANEHQLARHM--IPKDPLDGADIYLEIRAGTGGDEAAI 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY ++AE++ +K E L  + GE  G K     I G N Y  LK E G HR+ R
Sbjct: 127 FAGDLFRMYGKYAEQKNWKIEILSENPGEHGGYKEIISQISGNNVYSTLKYESGAHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ + PV DD   IEI+ +D ++DTYRASGAGGQHVN TDSA+RI
Sbjct: 187 VPETESGGRIHTSAATVAILPVGDDIQPIEINPADLKVDTYRASGAGGQHVNKTDSAIRI 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+P+G+VV+CQ+ERSQHKN+A+A  +L A+L ++E  K           K+ +G G   
Sbjct: 247 THLPSGIVVECQEERSQHKNRAKAMRLLAARLLDVERTK--AQNEQAAERKSLVGSGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            +IR+Y   P   V D R N+   S +D+L+G LD  +   
Sbjct: 305 ERIRTYNY-PQSRVTDHRINLTLYSLADILEGGLDAIITPL 344


>gi|24375323|ref|NP_719366.1| peptide chain release factor 1 [Shewanella oneidensis MR-1]
 gi|32171552|sp|Q8EAR3|RF1_SHEON RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|24350136|gb|AAN56810.1|AE015816_7 peptide chain release factor 1 [Shewanella oneidensis MR-1]
          Length = 363

 Score =  218 bits (555), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 110/346 (31%), Positives = 182/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     D  +  +    + L +E   L+  ++  K  Q    D     E+
Sbjct: 9   LEGLLERNEEVLALLGDASVIADQDRFRALSKEYSQLEEVVAGFKAYQQAQADLESAKEM 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D         +       ++      Q   L     D  +A++E+ AGAGG E+  
Sbjct: 69  LEEDDAEMREMAQEEIKAAKVELERLEAELQILLLPKDPNDDTNAFIEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE  +++ E +  ++GE  G K   + + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAEANRWQLEIMSSNEGEHGGFKEIIVKVSGEGAYGKLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   V ++  I I+ +D ++DT+R+SGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRVHTSAVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV+CQ +RSQHKN+AQA ++L A++  +E +KR        + ++ +  G   
Sbjct: 249 THIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEE--STRRSLVASGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            ++R+Y   P   V + R N+     ++V++GDLD  +   +   +
Sbjct: 307 ERVRTYNF-PQGRVSEHRINLTLYRLNEVMEGDLDAILGPLMQEHQ 351


>gi|304410657|ref|ZP_07392275.1| peptide chain release factor 1 [Shewanella baltica OS183]
 gi|304351141|gb|EFM15541.1| peptide chain release factor 1 [Shewanella baltica OS183]
          Length = 363

 Score =  218 bits (555), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 110/338 (32%), Positives = 178/338 (52%), Gaps = 9/338 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     D  +  +    + L +E   L++ ++  K  Q    D     E+
Sbjct: 9   LEGLLERNEEVMALLGDASVISDQDRFRALSKEYAQLEDVVAGFKAYQQAQVDLDSAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D         +               Q   L     D  +A++E+ AGAGG E+  
Sbjct: 69  LEEDDAEMREMAQEEMKAAKAKLEHLEDELQILLLPKDPDDDKNAFVEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE  +++ E +  ++GE  G K   + + G   YG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAEANRWQIEIMSCNEGEHGGFKEVIMKVSGDGVYGKLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   V ++  I I+ +D ++DT+R+SGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRVHTSAVTVVVLHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV+CQ +RSQHKN+AQA ++L A++  LE +KR        + ++ +  G   
Sbjct: 249 THIPTGIVVECQDQRSQHKNRAQAMSVLAARIQALEDEKRRSAEET--TRRSLVASGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            ++R+Y   P   V + R N+     ++V++GDLD  +
Sbjct: 307 ERVRTYNF-PQGRVSEHRINLTLYRLNEVMEGDLDAIL 343


>gi|117919221|ref|YP_868413.1| peptide chain release factor 1 [Shewanella sp. ANA-3]
 gi|166223605|sp|A0KT88|RF1_SHESA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|117611553|gb|ABK47007.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp.
           ANA-3]
          Length = 363

 Score =  218 bits (555), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 110/346 (31%), Positives = 182/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     D  +  +    + L +E   L+  ++  K  Q    D     E+
Sbjct: 9   LEGLLERNEEVLALLGDASVIADQERFRALSKEYSQLEEVVAGFKAYQQAQADLESAKEM 68

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D         +       ++      Q   L     D  +A++E+ AGAGG E+  
Sbjct: 69  LEEDDAEMREMAQEEIKAAKAELERLEAELQILLLPKDPNDDTNAFIEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE  +++ E +  ++GE  G K   + + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAEANRWQLEIMSSNEGEHGGFKEIIVKVSGEGAYGKLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   V ++  I I+ +D ++DT+R+SGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRVHTSAVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV+CQ +RSQHKN+AQA ++L A++  +E +KR        + ++ +  G   
Sbjct: 249 THIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEE--STRRSLVASGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            ++R+Y   P   V + R N+     ++V++GDLD  +   +   +
Sbjct: 307 ERVRTYNF-PQGRVSEHRINLTLYRLNEVMEGDLDAILGPLMQEHQ 351


>gi|300741300|ref|ZP_07071321.1| peptide chain release factor 1 [Rothia dentocariosa M567]
 gi|311113380|ref|YP_003984602.1| peptide chain release factor RF1 [Rothia dentocariosa ATCC 17931]
 gi|300380485|gb|EFJ77047.1| peptide chain release factor 1 [Rothia dentocariosa M567]
 gi|310944874|gb|ADP41168.1| peptide chain release factor RF1 [Rothia dentocariosa ATCC 17931]
          Length = 360

 Score =  218 bits (555), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 114/350 (32%), Positives = 178/350 (50%), Gaps = 11/350 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+     +   + L  +  DP +  N  +A+ + R    L   ++   + +    D   
Sbjct: 1   MFESIQVLLDEHTELQEQLADPAVQANQGKARRVGRRYAELTGIVTAYNKYKSLADDLEA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E+A E+ D +    T +       E   +    +     D  +  LEV AGAGG E+ 
Sbjct: 61  AREMASEDPDFAAEIPTLEAELEEAQERLRRLL--IPRDPDDGRNVILEVKAGAGGDEAA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA------TLLIKGPNAYGWLKGEQ 185
            +A  LLRMY R+AE + +KTE +     +  G K A      T        +  +K E 
Sbjct: 119 LFAGDLLRMYLRYAEHKGWKTEVISSTSTDVGGYKDAQIAIKGTSNEPAEGVWAHMKYEG 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS + + V+P VD+  EIEIS++D +ID YR+SG GGQ VNT
Sbjct: 179 GVHRVQRVPATESQGRIHTSAAGVLVFPEVDEPEEIEISQNDLKIDVYRSSGPGGQSVNT 238

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PTG+VV  Q E+SQ +N+  A  +LRA+L   + ++ +       +S+  
Sbjct: 239 TDSAVRITHLPTGIVVAMQNEKSQLQNREAAMRVLRARLLAHQQEQIDAENAAHRASQVR 298

Query: 306 -IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +    +IR+Y   P   + D RT  +  +   VLDGDLD  +++ + + 
Sbjct: 299 TMDRSERIRTYNF-PENRIADHRTGYKAYNLDAVLDGDLDPVVQSAIEMD 347


>gi|85859385|ref|YP_461587.1| peptide chain release factor 2 [Syntrophus aciditrophicus SB]
 gi|85722476|gb|ABC77419.1| bacterial peptide Chain Release Factor 2 (RF-2) [Syntrophus
           aciditrophicus SB]
          Length = 279

 Score =  218 bits (555), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 159/277 (57%), Positives = 209/277 (75%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A EE+D   L+  S++++ ++  V   + + +L  E D  +A + +HAGAGGTE+QDW 
Sbjct: 1   MAKEENDEEALEAISNDIESLRKSVRESELKMMLGSEQDPMNAIVSIHAGAGGTEAQDWV 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            MLLRMY RWAEKR FKT  ++   G+EAG+KS +  I+G  AYG+ K E G+HRLVRIS
Sbjct: 61  EMLLRMYLRWAEKRGFKTTIIDYLPGDEAGVKSVSFTIEGEYAYGYAKAEIGIHRLVRIS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+D++SRRHTSF+S++VYP V+D I +EI E D RIDTYR++GAGGQHVN TDSAVRITH
Sbjct: 121 PFDASSRRHTSFASVFVYPEVNDEIVVEIDEKDLRIDTYRSTGAGGQHVNKTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           +PTG+VVQCQ ERSQHKNKA A   LR++LYEL++Q++ E  +    +K +I WG QIRS
Sbjct: 181 MPTGIVVQCQNERSQHKNKAMAMKYLRSRLYELKIQEQNEKLSEINKTKKDIAWGSQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           YVLQPY+MVKD RTNIE  +   VLDGD+DD ++A L
Sbjct: 241 YVLQPYKMVKDHRTNIEIGNVGRVLDGDIDDLIEAYL 277


>gi|315023545|gb|EFT36549.1| Peptide chain release factor 1 [Riemerella anatipestifer RA-YM]
          Length = 362

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 99/346 (28%), Positives = 165/346 (47%), Gaps = 12/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QR + +      P +  +      L +E   L   +    E    L       E+
Sbjct: 9   LEAIKQRYNEVADLIIQPDVISDQKRYSSLNKEYSDLGKIVRVFDEYSTALNAIKEADEI 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  ++       Q     +   + E          AD  +  +E+ AG GG ES 
Sbjct: 69  IADGSDKDLVDLAKMEKQEAIDRIPSIEEELKYLLIPKDPADDKNVMVELRAGTGGDESA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   + RMYT + + + +K E  + ++  + G K   + ++G   YG +K E GVHR+ 
Sbjct: 129 IFVEDVYRMYTMYFKSKGWKHEVTDSNEASK-GYKELIMRVEGDGVYGIMKFESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P   + +++EI+ +D  + T R+ GAGGQ+VN  ++ V+
Sbjct: 188 RVPETESQGRVHTSAITVAVLP-EAEEVDVEINPADIEMQTSRSGGAGGQNVNKVETKVQ 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +TH PTG+VV CQQ RSQ  N+  A  MLR KLY++ELQK +   +I    KT +  G +
Sbjct: 247 LTHKPTGIVVVCQQARSQLANRELAMEMLRTKLYDIELQKVQ--GDIAAQRKTMVSTGDR 304

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              IR+Y   P   V D R N    +  + ++GD+ + + A +  +
Sbjct: 305 SAKIRTYNY-PQGRVTDHRINKSIYNLDNFMNGDIQEMLDALIMAE 349


>gi|241765770|ref|ZP_04763713.1| peptide chain release factor 2 [Acidovorax delafieldii 2AN]
 gi|241364339|gb|EER59478.1| peptide chain release factor 2 [Acidovorax delafieldii 2AN]
          Length = 300

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 153/298 (51%), Positives = 212/298 (71%), Gaps = 1/298 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  + ++   L DN  L E++ EE D + L        +++ E+E  +F  + S EAD  
Sbjct: 2   VLTLDKLTRELADNAELYEMSKEEGDEAGLLTIEAETAKLRPEIEQLEFRRMFSNEADPL 61

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           + ++++ AGAGGTE+ DWA+MLLR Y ++AE++ FKT   E   G+ AGIKSAT+ ++G 
Sbjct: 62  NCFVDIQAGAGGTEACDWASMLLRQYLKYAERKGFKTTVEEETAGDVAGIKSATIKVEGE 121

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYG L+ E GVHRLVR SP+DS+  RHTSF+S++VYP +DDSI+I+I+ +D R DTYRA
Sbjct: 122 YAYGLLRTETGVHRLVRKSPFDSSGGRHTSFASLFVYPEIDDSIQIDINPADVRTDTYRA 181

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQH+N TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+ E++KR+E 
Sbjct: 182 SGAGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHGNRDIAWQRLRSRLYDHEMRKRQEE 241

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
               E +KT++GWG QIRSYVL     +KDLRT +E ++   VLDGDLD F++A+L  
Sbjct: 242 QQKLEDTKTDVGWGHQIRSYVLD-NSRIKDLRTGVEISATQKVLDGDLDAFIEASLKQ 298


>gi|297184082|gb|ADI20201.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11]
          Length = 360

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 110/346 (31%), Positives = 179/346 (51%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLIL 72
            +   QR + +N     P +  +      L RE ++L   +       E+  R+ +   +
Sbjct: 7   LNVIFQRYNEVNDLIIQPDVISDSKRYVQLNREYKNLKPLVEVRSQYLELSSRIEEAKGV 66

Query: 73  LELALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L+   + D   + +   D      +   E  +   L     D  +A +E+  GAGG E  
Sbjct: 67  LKEEKDADFREMAKMELDELEPTFEALEEEVKLLLLPKDPEDDKNALVEIRQGAGGDEGA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+ E R +K   L +++G   G K  +  + G + YG LK E GVHR+ 
Sbjct: 127 IFAGDLFRMYQRYCEGRGWKVAVLTMNEGSSGGFKEVSFEVNGESVYGILKYESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +S+ V P   + +++++   D + DTYR+ GAGGQHVN T+SAVR
Sbjct: 187 RVPATESQGRVHTSAASVVVLP-EAEEVDVDLDMKDVKKDTYRSQGAGGQHVNKTESAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +TH+PTG+VV+CQ  RSQHKN  QA  +LR++++++E +K++E        KT +  G +
Sbjct: 246 LTHLPTGIVVECQDGRSQHKNYEQALKVLRSRMFDMEFKKKQEEQ--AAQRKTMVSTGDR 303

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              IR+Y   P   V D R  +   + +DV++GD+  F+      +
Sbjct: 304 SAKIRTYNY-PQGRVTDHRIGLTSYNLNDVVNGDIQKFIDELHMAE 348


>gi|145588324|ref|YP_001154921.1| peptide chain release factor 1 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189039983|sp|A4SV43|RF1_POLSQ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145046730|gb|ABP33357.1| bacterial peptide chain release factor 1 (bRF-1) [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 359

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 112/344 (32%), Positives = 178/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+   RL+ LN+        +++   + L RE   +   +      +    D     E+
Sbjct: 9   LDHLDTRLAELNSLLTSEEATKDMDAYRKLTREHSDIATVVEQFGLYKKAEADAQAAEEM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +      E        ++      Q   L     D  + +LE+ AG GG ES  +A
Sbjct: 69  RKDPEMKDFADEEQKQAQATMEELEGALQKLLLPKDVNDERNVFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE++ +K E +   + +  G K   L + G + Y  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYTRFAERQGWKVEVVNAAESDLGGYKEVVLRLVGQSVYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+   ++I+ ++ RIDT+RASGAGGQH+N TDSAVRITH
Sbjct: 189 QTETQGRIHTSACTVAVMPEADELEAVKINPAELRIDTFRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG VV+CQ +RSQH+N+ QA  +L +++ +   ++RE+     ++ K+ IG G    +
Sbjct: 249 IPTGTVVECQDDRSQHRNREQAMKVLVSRIMDA--REREKHQLEAQTRKSLIGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++DGD+DD   A  +  +
Sbjct: 307 IRTYNF-PQGRITDHRINLTLYKIDAMMDGDIDDLCNALASEHQ 349


>gi|88803826|ref|ZP_01119349.1| peptide chain release factor 1 [Polaribacter irgensii 23-P]
 gi|88780354|gb|EAR11536.1| peptide chain release factor 1 [Polaribacter irgensii 23-P]
          Length = 358

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 101/350 (28%), Positives = 172/350 (49%), Gaps = 12/350 (3%)

Query: 13  LFDWDNA-VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D      QR   ++     P    +      LM+E + L N +    E Q  + +   
Sbjct: 1   MLDKIRIVKQRYDEVSDLIIQPATIMDQKRYAQLMKEYKDLGNVVEKGDEYQALIDNIEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             E+  E  D  + +     +      +   +    F  + +   DS +A +E+ AG GG
Sbjct: 61  AKEILAEGSDAEMNEMAKSEIDEANSRIPKLEEEIRFLLIPTDPEDSKNAVVELRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY+++ E + +K   ++  +G   G K     + G + YG LK E GV
Sbjct: 121 DEASIFAGDLFRMYSKYCESKGWKVATVDYSEGTNGGFKEIQFEVNGADVYGTLKFEAGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS ++  V+P  ++     I+  D RID + +SG GGQ VNTT 
Sbjct: 181 HRVQRVPQTETQGRVHTSAATCMVFPEAEEFDVE-INPKDVRIDFFCSSGPGGQSVNTTY 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+V QCQ ++SQHKNK +A+ +LR++LY++EL K+     +     + + 
Sbjct: 240 SAVRLTHVPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDMELAKKNAEDALKRG--SMVS 297

Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            G +   IR+Y       V D R  +      ++++GD+   +   +  +
Sbjct: 298 SGDRSAKIRTYNYA-QGRVTDHRIGLSLYDLPNIMNGDIQRVIDELMLAE 346


>gi|153002121|ref|YP_001367802.1| peptide chain release factor 1 [Shewanella baltica OS185]
 gi|166223602|sp|A6WSF0|RF1_SHEB8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|151366739|gb|ABS09739.1| peptide chain release factor 1 [Shewanella baltica OS185]
          Length = 363

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 109/338 (32%), Positives = 178/338 (52%), Gaps = 9/338 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     D  +  +    + L +E   L++ ++  K  Q    D     E+
Sbjct: 9   LEGLLERNEEVMALLGDASVISDQDRFRALSKEYAQLEDVVAGFKAYQQAQADLDSAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D         +               Q   L     D  +A++E+ AGAGG E+  
Sbjct: 69  LEEDDAEMREMAQEEMKAAKAKLEHLEDELQILLLPKDPDDDKNAFVEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE  +++ E +  ++GE  G K   + + G   YG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAEANRWQIEIMSCNEGEHGGFKEVIMKVSGEGVYGKLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   V ++  I I+ +D ++DT+R+SGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRVHTSAVTVVVLHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV+CQ +RSQHKN+AQA ++L A++  +E +KR        + ++ +  G   
Sbjct: 249 THIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEE--STRRSLVASGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            ++R+Y   P   V + R N+     ++V++GDLD  +
Sbjct: 307 ERVRTYNF-PQGRVSEHRINLTLYRLNEVMEGDLDAIL 343


>gi|312142772|ref|YP_003994218.1| peptide chain release factor 1 [Halanaerobium sp. 'sapolanicus']
 gi|311903423|gb|ADQ13864.1| peptide chain release factor 1 [Halanaerobium sp. 'sapolanicus']
          Length = 357

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 117/350 (33%), Positives = 184/350 (52%), Gaps = 15/350 (4%)

Query: 13  LFDWD----NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           +FD D      V +   LN K  DP +  +  + + L+++   L   +   KE ++    
Sbjct: 1   MFDLDEKLDKLVDKYQDLNKKLSDPEVINDSSKYQKLLKKHAKLKKIVDKYKEYKEAKQG 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAG 124
                E+   EDD  + +     ++ ++   E  +       L     D  +  +E+ +G
Sbjct: 61  IEDAEEMIEMEDDPEMQELAELEIEELQPTKEKLEEELPIMLLPDDPNDEKNVIVEIRSG 120

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A  L RMY+R++E + +K E +  +     G K     ++G   Y +LK E
Sbjct: 121 AGGDEAALFAADLFRMYSRYSENQGWKVEVMNANLSGVGGYKEIIFTVEGSEVYKYLKYE 180

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S+ R HTS +++ V P   + ++I+I  +D RID YR+SG GGQ VN
Sbjct: 181 SGVHRVQRVPSTESSGRIHTSTATVAVLP-EAEEVDIDIDPNDLRIDVYRSSGPGGQSVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRITH PT + V CQ E+SQHKNKA+A  +LRA++   E  + E+ A   E+ K+
Sbjct: 240 TTDSAVRITHEPTEITVSCQDEKSQHKNKAKAMRILRARV--QEKIESEKQAKRAEARKS 297

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           ++G G    +IR+Y   P   V D R N+       +LDGDL   + A +
Sbjct: 298 QVGTGDRSEKIRTYNF-PQGRVSDHRINLTVHQLDKILDGDLAPVIDALI 346


>gi|264676913|ref|YP_003276819.1| peptide chain release factor 1 [Comamonas testosteroni CNB-2]
 gi|262207425|gb|ACY31523.1| peptide chain release factor 1 [Comamonas testosteroni CNB-2]
          Length = 359

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 115/339 (33%), Positives = 172/339 (50%), Gaps = 7/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QRL  L+       +  ++ + + + RE   +    S          D     E+
Sbjct: 9   LERYAQRLQELDFLLSREDIMGDMKQYRTISREHADVTAIASRYTRYLQTEADIAAAREM 68

Query: 76  ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + QE   + +       +  Q   L     D+  A++E+ AG GG ES  +A
Sbjct: 69  LDDPDMAEMAQEEIGSGEAELIKLEDELQRLLLPKDPDDARPAFVEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+A    +K E +   + E  G K   L I+G N YG L+ E G HR+ R+ 
Sbjct: 129 GDLTRMYTRYAANVGWKVEVMSASENEIGGYKEVVLRIEGDNVYGALRFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D++  I ++ +D RIDT+RASGAGGQH+N TDSAVR+ H
Sbjct: 189 ATETQGRIHTSACTVAVMPEPDEAEAITLNPADLRIDTFRASGAGGQHINKTDSAVRVVH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+V +CQ  RSQH NKA+A  +L+A++ E E  +R   A      K  IG G    +
Sbjct: 249 LPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSER--AAKEAAMRKGLIGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   + D R N+       V++GDL D ++A 
Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYKLLAVMEGDLGDVIQAL 344


>gi|312112637|ref|YP_003990953.1| peptide chain release factor 1 [Geobacillus sp. Y4.1MC1]
 gi|311217738|gb|ADP76342.1| peptide chain release factor 1 [Geobacillus sp. Y4.1MC1]
          Length = 358

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 120/351 (34%), Positives = 186/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68
           +F+  +   +R   LN    DP +  +  + +   +E+  L+  +   +E +    +L D
Sbjct: 1   MFERLEAVEERYEKLNQLLMDPEVINDPKKLRDYSKEQSDLEETVQTYREYKSVRKQLDD 60

Query: 69  NLILLELALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +LE  L+ +   +++E  D   QR +  +   +   L     D  +  +E+ A AGG
Sbjct: 61  AKAMLEEKLDPEMREMVKEEIDELEQRQEELINKLKILLLPKDPNDEKNVIMEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYTR+AE + +KTE +E       G K     I G  AY  LK E G 
Sbjct: 121 EEAALFAGDLYRMYTRYAESQGWKTEVIEASPTGLGGYKEIIFTINGKGAYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++   P   + IE+EI+E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVACLP-EMEEIEVEINEKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+VV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K  +G
Sbjct: 240 SAVRLTHIPTGIVVTCQDEKSQIKNKEKAMKVLRARIYDKY--QQEARAEYDQTRKQAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       VLDG LD+ ++A +   +
Sbjct: 298 TGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQVLDGSLDEIIEALILDDQ 347


>gi|238763213|ref|ZP_04624178.1| Peptide chain release factor 2 [Yersinia kristensenii ATCC 33638]
 gi|238698486|gb|EEP91238.1| Peptide chain release factor 2 [Yersinia kristensenii ATCC 33638]
          Length = 289

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 166/288 (57%), Positives = 207/288 (71%), Gaps = 1/288 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + D   LLELA+E DD     E    L  +  ++   +F  + SGE DS + YL++ AG+
Sbjct: 1   MEDVTGLLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQAGS 60

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWA+MLLRMY RWAE + FKTE +E  DG+ AG+KSAT+ I G  A+GWL+ E 
Sbjct: 61  GGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGDVAGLKSATIKIIGEYAFGWLRTET 120

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +D RID YRASGAGGQHVN 
Sbjct: 121 GVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNK 180

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE E+QK+     + E +K++
Sbjct: 181 TESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQMLEDNKSD 240

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 241 IGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKFIEASLKA 287


>gi|256390407|ref|YP_003111971.1| peptide chain release factor 1 [Catenulispora acidiphila DSM 44928]
 gi|256356633|gb|ACU70130.1| peptide chain release factor 1 [Catenulispora acidiphila DSM 44928]
          Length = 356

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 118/352 (33%), Positives = 176/352 (50%), Gaps = 16/352 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  D+ +   + L T+  DP +  +   A+ L +    L       +E      D   
Sbjct: 1   MFEVIDDLLAEYAELGTRLADPSVHADADVARKLGKRYAELGPIAETYREYTSVSDDITA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EL+ E+             +    E   K    +     D  +  LE+  G GG ES 
Sbjct: 61  AEELSAEDPAFGEEIPGLQERRTALEERLQKLL--IPRDPMDEKNVILEIKGGEGGQESM 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG------PNAYGWLKGEQ 185
            +A  LLRMY R+AE++ +KTE LE  + +  G K   + +KG         +  LK E 
Sbjct: 119 LFAGDLLRMYMRFAERQHWKTEILESTESDLGGYKDVQVAVKGRVNEAGEGVWARLKYEG 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS + + V P   + +E+EI+ +D RID +R+SG GGQ VNT
Sbjct: 179 GVHRVQRVPVTESQGRIHTSAAGVLVLP-EAEDVEVEINANDLRIDVFRSSGPGGQSVNT 237

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PTGVVV CQ E+SQ +NK  A  +LRA+L  L + + E      ++ K++
Sbjct: 238 TDSAVRITHLPTGVVVSCQNEKSQLQNKESAMRILRARL--LAVAQEEADREASDTRKSQ 295

Query: 306 I---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           I       +IR+Y   P   + D R   +  +   VLDGDLD  ++A +   
Sbjct: 296 IRTMDRSERIRTYNF-PENRISDHRVGYKSYNLDQVLDGDLDAVIQACVEAD 346


>gi|225012847|ref|ZP_03703280.1| peptide chain release factor 2 [Flavobacteria bacterium MS024-2A]
 gi|225002969|gb|EEG40946.1| peptide chain release factor 2 [Flavobacteria bacterium MS024-2A]
          Length = 314

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 145/307 (47%), Positives = 208/307 (67%), Gaps = 2/307 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M++ + L   +S  + I+  + D  +L+E     D  ++   +          +E  +F 
Sbjct: 1   MKQLRTLKKWVSDYEIIKQGIDDLEVLMEFEKSGDAEAVEVNSQYESS--LELLEALEFR 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LS E D   A L++ AGAGGTES DWA ML+RMY  W EK+ +K + L    G+ AGI
Sbjct: 59  NMLSDEGDDLSAVLQITAGAGGTESCDWAEMLMRMYLMWGEKQGYKIKELNHQAGDVAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ TL ++G  A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDSIEI IS 
Sbjct: 119 KTVTLELEGDFAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIVISP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           SD   +T RASGAGGQ+VN  ++AVR+ H PTG++++  + RSQ +NK +A  +LR++LY
Sbjct: 179 SDYTWETMRASGAGGQNVNKVETAVRLRHHPTGIIIENSETRSQLENKNKAMQLLRSQLY 238

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+ELQK+    +  E+SK +I WG QIR+YV+ PY++VKD+RT  E T    V++G +D 
Sbjct: 239 EIELQKKLSARDEIEASKKKIEWGSQIRNYVMHPYKLVKDVRTQHEVTDVDAVMNGQIDP 298

Query: 346 FMKATLA 352
           F+KA L 
Sbjct: 299 FLKAYLM 305


>gi|86134218|ref|ZP_01052800.1| peptide chain release factor 1 [Polaribacter sp. MED152]
 gi|85821081|gb|EAQ42228.1| peptide chain release factor 1 [Polaribacter sp. MED152]
          Length = 358

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 99/343 (28%), Positives = 172/343 (50%), Gaps = 11/343 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             QR   ++     P +  +      LM+E + L + +    E Q  + +     E+  +
Sbjct: 8   VKQRYDEVSDLIIQPEIIMDQKRYAQLMKEYKDLGDVVKKGDEYQTLMNNIEEAKEIIAD 67

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             D  + +     ++     +   +    F  +     D+ +A +E+ AG GG E+  +A
Sbjct: 68  GSDAEMTEMAKMQMEEANTRIPELEEEIKFLLIPKDPEDAKNAVVELRAGTGGDEASIFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYT++ E + +K   ++  +G   G K     + G + YG LK E GVHR+ R+ 
Sbjct: 128 GDLFRMYTKYCESKGWKVSTVDYSEGTNGGFKEIQFEVNGDDVYGILKFEAGVHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS ++  V+P  ++     I+  D RID + +SG GGQ VNTT SAVR+TH
Sbjct: 188 QTETQGRVHTSAATCMVFPEAEEFDVE-INPKDVRIDFFCSSGPGGQSVNTTYSAVRLTH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+V QCQ ++SQHKNK +A+ +LR++LY++EL K++    +     + +  G +   
Sbjct: 247 IPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDMELAKKQAEDALKRG--SMVSSGDRSAK 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IR+Y       V D R  +      ++++GD+   +   +  +
Sbjct: 305 IRTYNYA-QGRVTDHRIGLSLYDLPNIMNGDIQKIIDELMLAE 346


>gi|116491555|ref|YP_811099.1| peptide chain release factor 1 [Oenococcus oeni PSU-1]
 gi|290891160|ref|ZP_06554222.1| hypothetical protein AWRIB429_1612 [Oenococcus oeni AWRIB429]
 gi|116092280|gb|ABJ57434.1| bacterial peptide chain release factor 1 (bRF-1) [Oenococcus oeni
           PSU-1]
 gi|290479124|gb|EFD87786.1| hypothetical protein AWRIB429_1612 [Oenococcus oeni AWRIB429]
          Length = 357

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 102/345 (29%), Positives = 170/345 (49%), Gaps = 8/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             N V R   LN    DP +  +  +     +E   +   +   +  Q    +     EL
Sbjct: 8   IQNVVDRYDELNELLADPDVASDSGKYTRYAKELGEITPIVENYRRYQQLTNEINDDKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++  S+ ++    L+  +    E  +   +     D  +  +E+    GG E+  +A
Sbjct: 68  LNDKEMASLAKKELSELEPEQSELSEKLRVLMIPKDPNDDKNIIMEIRGAVGGDEANLFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LL MY  +A+ + +  E ++   GE  G K A + I G N Y  LK E G HR+ R+ 
Sbjct: 128 GDLLNMYAHYAQSQNWSFEIVDQTVGEAGGFKEAVINISGENVYSKLKFESGAHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIE-ISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
             ++  R HTS +++ V P  +D      I   D R D YR+SGAGGQH+N T SAVR+ 
Sbjct: 188 VTETQGRVHTSTATVGVMPEFEDIDTEGLIDPKDVREDVYRSSGAGGQHINKTSSAVRLV 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG+ V+ Q++RSQ +N+++AW +LR+++Y+   Q+  E     +  +T+IG G    
Sbjct: 248 HLPTGIKVEMQEQRSQQQNRSKAWQILRSRVYDHFAQENRE--QYDQQRRTKIGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R N        V++GDL++ + A +   +
Sbjct: 306 RIRTYNF-PQNRVTDHRINFTLNKLDKVINGDLEEIIDALIIADQ 349


>gi|221066286|ref|ZP_03542391.1| peptide chain release factor 2 [Comamonas testosteroni KF-1]
 gi|220711309|gb|EED66677.1| peptide chain release factor 2 [Comamonas testosteroni KF-1]
          Length = 299

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 156/296 (52%), Positives = 211/296 (71%), Gaps = 1/296 (0%)

Query: 58  FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
            ++++   L DN+ L E++ EE D + L+       ++K  +E  +F  +  GEAD  + 
Sbjct: 3   TLEKLTTELADNVELFEMSKEEGDDAGLETIEAETAKLKPLIEELEFRRMFGGEADPLNC 62

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           ++++ AGAGGTE+ DWA+MLLR Y ++AE++ FK    E   G+ AGIKSAT+ ++G  A
Sbjct: 63  FIDIQAGAGGTEACDWASMLLRQYLKYAERKGFKATVEEETPGDVAGIKSATIKVEGEYA 122

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           YG L+ E GVHRLVR SP+DS+  RHTSFSS++VYP +DDSIEI I+ SD R DTYRASG
Sbjct: 123 YGLLRTETGVHRLVRKSPFDSSGGRHTSFSSLFVYPEIDDSIEININPSDVRTDTYRASG 182

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           AGGQH+N TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+ E++KR E   
Sbjct: 183 AGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKRMEEQQ 242

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             E +KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 243 KLEDTKTDVGWGHQIRSYVLD-NSRIKDLRTNVEVSATQKVLDGDLDVFIEASLKQ 297


>gi|264679119|ref|YP_003279026.1| peptide chain release factor 2 [Comamonas testosteroni CNB-2]
 gi|262209632|gb|ACY33730.1| peptide chain release factor 2 [Comamonas testosteroni CNB-2]
          Length = 299

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 156/296 (52%), Positives = 210/296 (70%), Gaps = 1/296 (0%)

Query: 58  FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
            ++++   L DN  L E++ EE D + L+       ++K  +E  +F  +  GEAD  + 
Sbjct: 3   TLEKLTTELADNSELFEMSKEEGDDAGLETIEAETAKLKPLIEELEFRRMFGGEADPLNC 62

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           ++++ AGAGGTE+ DWA+MLLR Y ++AE++ FK    E   G+ AGIKSAT+ ++G  A
Sbjct: 63  FIDIQAGAGGTEACDWASMLLRQYLKYAERKGFKATVEEETPGDVAGIKSATIKVEGEYA 122

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           YG L+ E GVHRLVR SP+DS+  RHTSFSS++VYP +DDSIEI I+ SD R DTYRASG
Sbjct: 123 YGLLRTETGVHRLVRKSPFDSSGGRHTSFSSLFVYPEIDDSIEININPSDVRTDTYRASG 182

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           AGGQH+N TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+ E++KR E   
Sbjct: 183 AGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKRMEEQQ 242

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
             E +KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 243 KLEDTKTDVGWGHQIRSYVLD-NSRIKDLRTNVEVSATQKVLDGDLDVFIEASLKQ 297


>gi|300115109|ref|YP_003761684.1| peptide chain release factor 1 [Nitrosococcus watsonii C-113]
 gi|299541046|gb|ADJ29363.1| peptide chain release factor 1 [Nitrosococcus watsonii C-113]
          Length = 360

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 186/346 (53%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---LCDNLIL 72
            +   +R   L     +P +     + + L +E   L+  IS  ++ +     L ++  L
Sbjct: 9   LETLAERQQELTALLAEPEIASAQKQFRELSQEYAQLEPVISCFRDFEQAQNVLDESKAL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L+    E      +E +   ++++          L +   D  + +LE+ AG GG E+  
Sbjct: 69  LQDQDPELRVLAQEEIAATEKKLERLDRELHTLLLPTDPNDKRNIFLEIRAGTGGDEAAL 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A+ LLRMY R+ E+R ++TE +    GE  G K   + I G  AY  LK E G HR+ R
Sbjct: 129 FASDLLRMYLRYVEQRGWRTEIMGDSPGEHGGHKEIIVRIVGAGAYSRLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ + P  ++  EI+I+ +D R+DT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPQTESQGRIHTSACTVAIMPEAEEIDEIDINPADLRVDTFRASGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+P+G+VV+CQ ERSQHKN+A+A ++LR K      ++ + +A    + ++ IG G   
Sbjct: 249 THLPSGIVVECQDERSQHKNRARAMSLLRTK--LKLEEEEKLVAEETATRRSLIGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+      ++L G+LD  +   +A  +
Sbjct: 307 ERIRTYNF-PQGRVTDHRINLTLYKLDEILQGNLDAIIDLLVAEYQ 351


>gi|87120696|ref|ZP_01076589.1| peptide chain release factor 2, programmed frameshift [Marinomonas
           sp. MED121]
 gi|86163924|gb|EAQ65196.1| peptide chain release factor 2, programmed frameshift [Marinomonas
           sp. MED121]
          Length = 293

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 160/292 (54%), Positives = 215/292 (73%), Gaps = 1/292 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L D   LL++A+EEDD   ++  +  L+ ++ ++   +F  + S E D  +A+L++
Sbjct: 1   MESGLVDAKELLDMAVEEDDEDSVEAVTMELEELEAQLSKLEFRRMFSQEMDPTNAFLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWANMLLRMY RW E + FK E +E+  G+ AGIKSAT+  +G  A+GWL
Sbjct: 61  QAGSGGTEAQDWANMLLRMYLRWGEDKGFKVELMEVSAGDVAGIKSATIRFEGEYAFGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS SRRHTSF+S+++ P +DD++EI+I+ +D R DTYR+SGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSGSRRHTSFASVFLSPEIDDNVEIDINPADLRTDTYRSSGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRITHIPTG+VVQCQ +RSQH N+  A   LRAKLYE E+QKR E A   E 
Sbjct: 181 HVNTTDSAVRITHIPTGIVVQCQNQRSQHANRDFAMKQLRAKLYEFEMQKRTEAAQAVED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT +E ++   VLDG+LD F+ A+L  
Sbjct: 241 TKSDIGWGSQIRSYVLD-SSRIKDLRTGVESSNTGAVLDGNLDQFIVASLKQ 291


>gi|125623422|ref|YP_001031905.1| peptide chain release factor 1 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|166223566|sp|A2RIR4|RF1_LACLM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|124492230|emb|CAL97159.1| peptide chain release factor 1 (RF-1) [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|300070169|gb|ADJ59569.1| peptide chain release factor 1 [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 357

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 102/352 (28%), Positives = 176/352 (50%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---D 68
           +FD  ++ V R   L     DP +  +      L RE   L + ++   E +  L    D
Sbjct: 1   MFDQLESIVGRYEELGELLSDPEVVSDTKRFMELSREEADLRDKVATYNEYKKVLETISD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAG 126
           +  +L     +D+   + +   +  + + EV  ++ + LL  +  +   +  LE+   AG
Sbjct: 61  SEEMLGEGGLDDEMKEMLKEELSSAKSQKEVLEEEIKILLLPKDPNDGKNIILEIRGAAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  LL MY  ++E + +K E +E +     G K  + LI GP+ Y  LK E G
Sbjct: 121 GDEAALFAGDLLNMYQHFSESQGWKFEIMEANITGIGGYKEVSALISGPSVYSKLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   ++  R HTS +++ V P V++     I + D R+D Y ASGAGGQ+VN  
Sbjct: 181 AHRVQRVPVTETQGRVHTSTATVLVMPEVEEFEMT-IEQKDLRVDIYHASGAGGQNVNKV 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            +AVR+ H+PTG+ V+ Q+ER+Q KN+ +A  +L  K+++    ++ E+       K+ +
Sbjct: 240 ATAVRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYY--QQIELDKQNTERKSTV 297

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 298 GTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKMDEVIDALIVYDQ 348


>gi|160876841|ref|YP_001556157.1| peptide chain release factor 1 [Shewanella baltica OS195]
 gi|189039990|sp|A9L2D4|RF1_SHEB9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|160862363|gb|ABX50897.1| peptide chain release factor 1 [Shewanella baltica OS195]
 gi|315269044|gb|ADT95897.1| peptide chain release factor 1 [Shewanella baltica OS678]
          Length = 363

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 109/338 (32%), Positives = 178/338 (52%), Gaps = 9/338 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     D  +  +    + L +E   L++ ++  K  Q    D     E+
Sbjct: 9   LEGLLERNEEVMALLGDASVISDQDRFRALSKEYAQLEDVVAGFKAYQQAQVDLDSAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D         +               Q   L     D  +A++E+ AGAGG E+  
Sbjct: 69  LEEDDAEMREMAQEEMKAAKAKLEHLEDELQILLLPKDPDDDKNAFVEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE  +++ E +  ++GE  G K   + + G   YG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAEANRWQIEIMSCNEGEHGGFKEVIMKVSGDGVYGKLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   V ++  I I+ +D ++DT+R+SGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRVHTSAVTVVVLHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV+CQ +RSQHKN+AQA ++L A++  +E +KR        + ++ +  G   
Sbjct: 249 THIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEE--STRRSLVASGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            ++R+Y   P   V + R N+     ++V++GDLD  +
Sbjct: 307 ERVRTYNF-PQGRVSEHRINLTLYRLNEVMEGDLDAIL 343


>gi|167754864|ref|ZP_02426991.1| hypothetical protein CLORAM_00368 [Clostridium ramosum DSM 1402]
 gi|237735404|ref|ZP_04565885.1| peptide chain release factor 1 [Mollicutes bacterium D7]
 gi|167704914|gb|EDS19493.1| hypothetical protein CLORAM_00368 [Clostridium ramosum DSM 1402]
 gi|229381149|gb|EEO31240.1| peptide chain release factor 1 [Coprobacillus sp. D7]
          Length = 358

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 113/352 (32%), Positives = 181/352 (51%), Gaps = 11/352 (3%)

Query: 11  GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---L 66
             + D       R   L     DP +  ++ +   + +E+  L  A    +E ++    +
Sbjct: 3   ESMLDRLKTMENRYEELGHMLMDPDIGSDIKKMTEVTKEQSSLQAAYDLYQEYKEVEAGI 62

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   L + +  E       E ++   R+   +   + E +     D+ D  +E+   AG
Sbjct: 63  SDAKELAKESDPEIKEMAKMELAELETRLPEIISKLEIELIPKDPNDNKDVIMEIRGAAG 122

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E   +A  L RMY ++AE + +K E +E  D E  G    + ++KG + YG LK E G
Sbjct: 123 GDEGNIFAGDLYRMYVKYAESQGWKVEVMEAVDAEAGGYSLISFMVKGEDVYGKLKFESG 182

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   ++  R HTS +++ V P   + +++EI++SD RIDTYRASGAGGQH+N T
Sbjct: 183 SHRVQRVPKTETQGRVHTSTATVLVMP-EMEEVDVEINKSDLRIDTYRASGAGGQHINKT 241

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTG+V   Q  RSQH NK +A   L +++Y+   Q+ +E   +G   K+++
Sbjct: 242 DSAVRITHLPTGIVAASQDGRSQHDNKDKAMKALVSRIYDFYQQQHDE--QVGSERKSKV 299

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       ++DG LDD + A +   +
Sbjct: 300 GSGDRAEKIRTYNY-PQNRVTDHRIGLTIQQLDRIVDGKLDDIITALINEDQ 350


>gi|268316168|ref|YP_003289887.1| peptide chain release factor 1 [Rhodothermus marinus DSM 4252]
 gi|262333702|gb|ACY47499.1| peptide chain release factor 1 [Rhodothermus marinus DSM 4252]
          Length = 360

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 116/348 (33%), Positives = 183/348 (52%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     DP +  +      L RE   L   +  I+  +  L +   L EL
Sbjct: 7   LEEIKRRYEEVTQALSDPEVAADPKRLAELGREHASLRAVVEAIEAYERLLAEQESLREL 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++     L+ ++  +   +       +   E D  +A +E+ AG GG E+ 
Sbjct: 67  IRTESDPELIRMARHELEELEERLPAVEEDLRLRLIPQDEMDRRNAIVEIRAGTGGDEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE++ +K E L+   G   G K     +KGP+ YG +K E GVHR+ 
Sbjct: 127 LFAGDLFRMYSRFAERKGWKLEVLDASPGTVGGFKEIIFSLKGPDVYGTMKYESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +S+ V P   + +++EI   D RID +RASG GGQHVN T+SAVR
Sbjct: 187 RVPATESQGRIHTSAASVVVLP-EAEEVDVEIRPEDLRIDVFRASGPGGQHVNRTESAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+PTG+VV CQ E+SQH+N+ +A  +LRA+LYELE +++    +     +  I  G +
Sbjct: 246 ITHVPTGIVVACQDEKSQHQNREKALRILRARLYELEQERQRAERDAV--RRASIKTGDR 303

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTS--PSDVLDGDLDDFMKATLAIK 354
              IR+Y   P   V D R   +  +     +++G+LD+ + A    +
Sbjct: 304 SAKIRTYNF-PQDRVTDHRLEGDLKNWPLHRIIEGELDELINALRTAE 350


>gi|118602715|ref|YP_903930.1| peptide chain release factor 1 [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166223599|sp|A1AX02|RF1_RUTMC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118567654|gb|ABL02459.1| bacterial peptide chain release factor 1 (bRF-1) [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
          Length = 363

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 114/351 (32%), Positives = 180/351 (51%), Gaps = 10/351 (2%)

Query: 12  GLF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            +F   +    RL  ++    +P +  +V +   L  ER  L       +       +  
Sbjct: 4   SIFAKLEQLSMRLEEVDVMLSNPKVASDVKKFTKLSIERAQLTPVNQQFQAYLSHHRNLE 63

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGG 127
               + LE+D         + L   K         +   L     DS +  +E+ AG GG
Sbjct: 64  DAKLMLLEDDMDIKAMAKEEMLDVKKKLDHLYLELKKSLLPKDPNDSRNIIIEIRAGTGG 123

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +++ L +MY+R+ EK+K++ E +    GE  G K     I G   Y  LK E G 
Sbjct: 124 NEASIFSSNLFKMYSRYTEKKKWQIEVISSSLGEHGGFKEIIARISGVGVYSKLKFESGA 183

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS  +I + P V++  E+ I+ SD R+DT+RASGAGGQHVN T+
Sbjct: 184 HRVQRVPETESQGRVHTSACTIAIMPEVENIEEVNINMSDVRVDTFRASGAGGQHVNKTN 243

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG V +CQ  RSQHKNKAQA  +L +++++L  Q++E+      + K  IG
Sbjct: 244 SAVRITHIPTGTVAECQDGRSQHKNKAQALLVLASRIFDL--QQQEQHKEQASTRKELIG 301

Query: 308 WGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   + D R N+     S++++G+L+  ++  +  ++
Sbjct: 302 SGDRSQRIRTYNY-PQGRITDHRINLTLYKLSEIMEGNLNAIIEPLIVEQQ 351


>gi|254511294|ref|ZP_05123361.1| peptide chain release factor 1 [Rhodobacteraceae bacterium KLH11]
 gi|221535005|gb|EEE37993.1| peptide chain release factor 1 [Rhodobacteraceae bacterium KLH11]
          Length = 357

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 175/344 (50%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QR  +L     D     ++     L +E   L   +  I   +  + D      +
Sbjct: 13  LEQITQRFQYLEAAMADGASGGDIA---ALAKEYSDLKPVVDQILGWRQLVADLAEAEAM 69

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E    LQ          Q   L    AD+  A LE+  G GG E+  +A
Sbjct: 70  LSDPDMKELAEEEIPQLQARIPEAEHALQLALLPRDAADARPAMLEIRPGTGGDEAALFA 129

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE R ++ E +E    +  GIK     IKG N +  +K E GVHR+ R+ 
Sbjct: 130 GDLLRMYQRYAEGRGWQFEIIEEQASDLGGIKEVVAHIKGDNVFARMKYESGVHRVQRVP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++I+I  +D RIDT R+SGAGGQHVNTTDSAVRITH
Sbjct: 190 ETESGGRIHTSAATVAVLP-EAEDVDIQIDANDIRIDTMRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +P+G+VV    E+SQH+N+  A  +L+ +LY+LE Q+ +  +       +++G G    +
Sbjct: 249 LPSGIVVTSS-EKSQHRNREIAMQVLKTRLYDLERQRID--SARSADRASQVGSGDRSER 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       V+ GDLD+ + A  A  +
Sbjct: 306 IRTYNF-PQGRMTDHRINLTLYKLDQVMQGDLDEVIDALTADDQ 348


>gi|328957995|ref|YP_004375381.1| peptide chain release factor 1 [Carnobacterium sp. 17-4]
 gi|328674319|gb|AEB30365.1| peptide chain release factor 1 [Carnobacterium sp. 17-4]
          Length = 358

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 106/351 (30%), Positives = 172/351 (49%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++   R   LN    DP +  +      L +E   +   ++  +  ++   D   
Sbjct: 1   MFDRLESVEGRYEELNELLSDPEVVSDTKRLMKLTKEEAAIRETVATYRRYKEVSQDISD 60

Query: 72  LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             E+  E+ D  + +   +      +      E  +   L   E D  +  +E+   AGG
Sbjct: 61  TEEMLGEKLDSEMAEMAKEELNDLKKEKTEIEEKMKILMLPKDENDDRNIIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+Q +A  L  MY ++A+ + ++TE L+ +     G K  TL+I G N Y  LK E G 
Sbjct: 121 DEAQLFAGTLFNMYQKYADAQGWRTEVLDANITGIGGYKEITLMITGDNVYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +E+ + + D R D Y ASGAGGQHVN T 
Sbjct: 181 HRVQRVPSTESQGRIHTSTATVVVMP-EAEEVELNLPDKDIRTDIYHASGAGGQHVNKTA 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+ V  Q ERSQ KN+ +A  +LRA++Y+    ++   +      K+ +G
Sbjct: 240 SAVRLTHLPTGIAVAMQDERSQIKNREKAMKVLRARVYDHI--QQAAQSEYDAERKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 298 TGDRSERIRTYNY-PQSRVTDHRIGLTIQKLDQILSGKLDEIIDALILNDQ 347


>gi|281491061|ref|YP_003353041.1| peptide chain release factor 1 [Lactococcus lactis subsp. lactis
           KF147]
 gi|281374819|gb|ADA64339.1| Peptide chain release factor 1 (RF-1) [Lactococcus lactis subsp.
           lactis KF147]
          Length = 357

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 101/352 (28%), Positives = 176/352 (50%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---D 68
           +FD  ++ V R   L     DP +  +      L RE   L + ++   + +  L    D
Sbjct: 1   MFDQLESIVGRYEELGELLSDPEVVSDTKRFMELSREEADLCDKVATYNDYKKVLETISD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAG 126
           +  +L     +DD   + +   +  + + E+  ++ + LL  +  +   +  LE+   AG
Sbjct: 61  SEEMLGEGGLDDDMKEMLKEELSSAKSQKELLEEEIKILLLPKDPNDGKNIILEIRGAAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  LL MY  ++E + +K E +E +     G K  + LI GP+ Y  LK E G
Sbjct: 121 GDEAALFAGDLLNMYQHFSESQGWKFEIMEANITGIGGYKEVSALISGPSVYSKLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   ++  R HTS +++ V P V++     I + D R+D Y ASGAGGQ+VN  
Sbjct: 181 AHRVQRVPVTETQGRVHTSTATVLVMPEVEEFEMT-IDQKDLRVDIYHASGAGGQNVNKV 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            +AVR+ H+PTG+ V+ Q+ER+Q KN+ +A  +L  K+++    ++ E+       K+ +
Sbjct: 240 ATAVRMVHLPTGIKVEMQEERTQQKNRDKAIKLLNTKVFDYY--QQIELDKQNAERKSTV 297

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 298 GTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKMDEVIDALIVYDQ 348


>gi|319788960|ref|YP_004090275.1| peptide chain release factor 1 [Ruminococcus albus 7]
 gi|315450827|gb|ADU24389.1| peptide chain release factor 1 [Ruminococcus albus 7]
          Length = 359

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 102/352 (28%), Positives = 177/352 (50%), Gaps = 12/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+       + + +N +   P +  +      LM E ++L+  +  ++E      +   
Sbjct: 1   MFEKLRALEDKFNEINERLMQPEVVNDSKLYTELMIEYKNLEPVVEALREYDKAKAEFDE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKL-----EVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            +E++ +    + +++                 E  +   L     D  +  +E+  GAG
Sbjct: 61  AVEMSSDSSLDADMKDMVQEQYAESKAAMARLEEELKILLLPKDPNDDRNVIIEIRGGAG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +AN L RMY+ +A ++ ++ E +  ++ E  G K  T  + G  AY  LK E G
Sbjct: 121 GEEAALFANSLYRMYSMYAAQKNWQIEVMSANETELGGYKEITFTVSGQGAYSRLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS  ++ V P VDD       E + +++ +R+SGAGGQH+N T
Sbjct: 181 VHRVQRVPETESQGRVHTSTVTVAVLPEVDDVELEINEEKEIKMEVFRSSGAGGQHINKT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+ HIPTG VV+CQ ERSQ +N+ +A  ML+AKL  L+ + R +   I  + ++++
Sbjct: 241 SSAVRLIHIPTGTVVECQNERSQFQNREKALKMLKAKL--LDEKVRAQEDEIASNRRSQV 298

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   + D R  +       +L+G+LD+ + A     +
Sbjct: 299 GTGDRSEKIRTYNF-PESRISDHRIKLTLYKLEQILNGNLDEVIDALATADQ 349


>gi|301299965|ref|ZP_07206192.1| peptide chain release factor 1 [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300852447|gb|EFK80104.1| peptide chain release factor 1 [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 360

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 106/352 (30%), Positives = 182/352 (51%), Gaps = 12/352 (3%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLC 67
            LFD       R   L     DP +  +      L +E   L   +    + +    ++ 
Sbjct: 3   KLFDRLQMLEDRYEELGELLSDPDVISDTKRFTKLSKEMVDLRETVEKYNKYKEVTQQIS 62

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
           D+  +L   L+++  S+++E   N +  K    E  +   L     D  +  +E+   AG
Sbjct: 63  DDEEMLSDGLDDEMASLVKEELSNAKNEKVKLEEEIKILLLPKDPNDDKNIIMEIRGAAG 122

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L  MY+++AE++ +  E ++ +  E  G K   L+I G + +  LK E G
Sbjct: 123 GDEASLFAADLFSMYSKYAERQGWSIEVIDKNVTEVGGFKEIALIINGNSVWSKLKYESG 182

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ RI   +S  R HTS +++ V P  ++ +EIE+   D R+D YR+SGAGGQH+N T
Sbjct: 183 AHRVQRIPVTESAGRVHTSTATVVVMP-EEEDVEIELDPKDIRVDVYRSSGAGGQHINKT 241

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+TH+PTG+VV  Q +RSQ +N+ +A  +L+A++Y+   Q+  E +    + K+ +
Sbjct: 242 SSAVRMTHLPTGIVVAMQDQRSQQQNREKAMKILKARVYDYYAQQ--EQSEYDANRKSAV 299

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       +++G+L+D + A +  ++
Sbjct: 300 GTGDRSERIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELEDVIDALVLFEQ 350


>gi|224541463|ref|ZP_03682002.1| hypothetical protein CATMIT_00632 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525621|gb|EEF94726.1| hypothetical protein CATMIT_00632 [Catenibacterium mitsuokai DSM
           15897]
          Length = 358

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 110/346 (31%), Positives = 171/346 (49%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL---CDNLIL 72
                +R   L     DP +  ++ +     +E+  L+ A +  KE +  L    +   L
Sbjct: 8   LQTVEKRYEELTQILMDPSIANDIQKMTQASKEQASLEKAYNLYKEYKALLDGIEEAKEL 67

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L     E       E  +  ++  +     Q E +     D  +  +E+   AGG E   
Sbjct: 68  LNENDPEIKEMAKMELEELEKKQPIMEHDIQIELIPKDPNDEKNVVMEIRGAAGGDEGNI 127

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AE + +K E  +    E  G    + +IKG   Y  +K E G HR+ R
Sbjct: 128 FAGDLFRMYSKYAESQGWKIEIEDAQPSEAGGYSLISFIIKGNGVYSKMKFESGSHRVQR 187

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P   + ++I+I   D RIDTYR+SGAGGQH+N TDSAVRI
Sbjct: 188 VPKTETQGRVHTSTATVLVMP-EAEEVDIDIDPKDLRIDTYRSSGAGGQHINKTDSAVRI 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+V   Q  RSQH N+A+A   LR ++YE +L  REE   +G   + +IG G   
Sbjct: 247 THIPTGIVATSQDGRSQHDNRAKAMQSLRTRVYEAKL--REEEEKLGNERRNKIGSGDRA 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +++G L+  + A +   +
Sbjct: 305 EKIRTYNY-PQNRVTDHRIGLTIQQLDRIMEGKLEPIIDALINEDQ 349


>gi|325929457|ref|ZP_08190585.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas
           perforans 91-118]
 gi|325540232|gb|EGD11846.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas
           perforans 91-118]
          Length = 361

 Score =  218 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 112/345 (32%), Positives = 174/345 (50%), Gaps = 8/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L     DP +  N    + L RE   L+     ++E      D      L
Sbjct: 9   LEALAERREELQHLLSDPDVVGNNDTFRTLSRELSQLEPVAVALEEEARAKADLATAEAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQF-ESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E     Q    +++ +     +     D  + +LEV AG GG E+  +A
Sbjct: 69  RNDPEMRELAEEEIAAAQARLEQLDAQLASLLVPRDPRDDGNLFLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+AE++ +K E      GE  G K     + G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ + P  DD  EI I+ +D ++DT+R+SGAGGQHVN T+SA+RITH
Sbjct: 189 ATESQGRIHTSAATVAIIPEADDVEEITINPADLKVDTFRSSGAGGQHVNKTESAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311
           +P+GVVV+CQ ERSQH N+ +A   L+A+L + E  K    A   ++ K ++G G    +
Sbjct: 249 VPSGVVVECQTERSQHANRDKAMKRLKAQLLDAERSK--AAAAEAQTRKLQVGSGDRSQR 306

Query: 312 IRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R   +      ++++GDLD  +   L   +
Sbjct: 307 IRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIGRLLHEHQ 350


>gi|254482800|ref|ZP_05096037.1| peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2148]
 gi|214036881|gb|EEB77551.1| peptide chain release factor 1 [marine gamma proteobacterium
           HTCC2148]
          Length = 361

 Score =  218 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 110/341 (32%), Positives = 171/341 (50%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   ++    D     +  + + L RE   L+  +    +      D      +
Sbjct: 9   LETLTDRHEEVSALLGDNETISDQDKFRDLSREYSELEAVVRCYADYSQVKGDLDEARLM 68

Query: 76  ALEEDDCSILQETSDNLQ---RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +      R++      Q   L     DS++ +LE+ AG GG E+  
Sbjct: 69  LEDSDPDLREMAQEEIDSGSGRLEQLEAQLQALLLPRDPNDSHNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AE   +K E L    GE  G K     ++G + Y  LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAENMGWKVEVLSERHGEHGGYKEIITRVEGRDVYAHLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ + P  +   ++EI+++D R+DTYRASGAGGQHVN TDSAVR+
Sbjct: 189 VPETESQGRIHTSACTVAIMPEAEAVDQVEINKADLRVDTYRASGAGGQHVNKTDSAVRL 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+P+G+VV+CQ ERSQHKN+A+A ++L+AKL      K  E     E  +  +G G   
Sbjct: 249 THLPSGIVVECQDERSQHKNRARAMSLLQAKLLTSAQDKAAEEQ--AEQRRNLVGTGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            +IR+Y   P   + D R N+     ++V++GDL   +   
Sbjct: 307 DRIRTYNF-PQGRLTDHRINLTLYKLAEVVEGDLGAVVGPL 346


>gi|254461785|ref|ZP_05075201.1| peptide chain release factor 1 [Rhodobacterales bacterium HTCC2083]
 gi|206678374|gb|EDZ42861.1| peptide chain release factor 1 [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 351

 Score =  218 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 121/342 (35%), Positives = 175/342 (51%), Gaps = 12/342 (3%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              QR  FL  K        +  E   L RE   +   +  +   +  L D      +  
Sbjct: 9   QITQRFEFLEAKMAGG---ADPGEIADLAREYSDMKPVVEQVAAYRQLLSDIEDAEAMLD 65

Query: 78  EEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           + +   + +E        +       Q   L   EAD+  A +E+  G GG E+  +A  
Sbjct: 66  DPEMKELAEEELPALKAAMPKAEAALQLALLPKDEADARPAMIEIRPGTGGDEAALFAAD 125

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           LLRMY R++E R +K E +E    E  GIK  T  IKG N +  LK E GVHR+ R+   
Sbjct: 126 LLRMYQRYSEARGWKFEIIEEQLTELGGIKEVTGHIKGENVFARLKYESGVHRVQRVPTT 185

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS +++ V P     +++ I+ +D RIDT RASGAGGQHVNTTDSAVRITHIP
Sbjct: 186 ESGGRIHTSAATVAVLP-EAQEVDLVIAANDIRIDTMRASGAGGQHVNTTDSAVRITHIP 244

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG++V    E+SQH+N+  A  +LR +LY+ E Q+ +E        K+++G G    +IR
Sbjct: 245 TGIIV-VSAEKSQHRNREIAMQVLRTRLYDAERQRIDEER--SADRKSQVGSGDRSERIR 301

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   + D R N+       V++GDLD+ + A  A  +
Sbjct: 302 TYNF-PQGRMSDHRINLTLYKLDQVMEGDLDEIIDALTADDQ 342


>gi|254515300|ref|ZP_05127361.1| peptide chain release factor 1 [gamma proteobacterium NOR5-3]
 gi|219677543|gb|EED33908.1| peptide chain release factor 1 [gamma proteobacterium NOR5-3]
          Length = 361

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 114/337 (33%), Positives = 178/337 (52%), Gaps = 9/337 (2%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           L   +   +R   ++    DP +  +  + + L RE   L+  +    E Q  L D    
Sbjct: 6   LLKLETLSERHEEVSALLGDPGVIADQDQFRQLSREYSELETVVKCFGEYQALLGDIEAA 65

Query: 73  LELALEEDDCSILQETSDNLQ---RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             +  ++D        ++  +   R +      Q   L     DS++ +LE+ AG GG E
Sbjct: 66  QSMLADDDADMREMAKAEISEGEARREALEAELQVLLLPRDPRDSHNVFLEIRAGTGGDE 125

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  ++  L RMYTR+AE++ ++ E L    GE  G K     I+G + Y +LK E G HR
Sbjct: 126 AAIFSGDLQRMYTRFAERQGWRLEVLSERPGEHGGYKEIISRIEGTDVYAYLKFESGAHR 185

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ +    ++   IEI+++D R+DTYR+SGAGGQHVN TDSA
Sbjct: 186 VQRVPETESQGRIHTSACTVAILAEPEELEAIEINKADLRVDTYRSSGAGGQHVNKTDSA 245

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+TH+PTG+VV+CQ ERSQHKN+A+A ++L+AKL         + +   E  +  +G G
Sbjct: 246 VRLTHLPTGIVVECQDERSQHKNRARAMSLLQAKLTSSAE--AAQASEQAEQRRNLVGTG 303

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
               +IR+Y   P   V D R N+      +V+ GD+
Sbjct: 304 DRSDRIRTYNF-PQGRVTDHRINLTLYKLDEVMAGDM 339


>gi|257870909|ref|ZP_05650562.1| peptide chain release factor 1 [Enterococcus gallinarum EG2]
 gi|257805073|gb|EEV33895.1| peptide chain release factor 1 [Enterococcus gallinarum EG2]
          Length = 357

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 105/347 (30%), Positives = 168/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E  +    +   +  ++ +       EL
Sbjct: 5   LQAIEDRYEELGELLSDPAVISDTKRFMQLSKEEANTRETVEVYRRYKEVVEGIKDTEEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E  D  + +   + L  +K E +  +       L     D  +  +E+   AGG E+ 
Sbjct: 65  LGENLDAEMAEMAKEELSDLKKEKDVLEDRIKILLLPKDPNDDKNIIMEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY ++AE + +K E ++ +     G K   ++I G N Y  LK E G HR+ 
Sbjct: 125 LFAGDLFNMYQKYAETQGWKVEVMDANVTGIGGYKEVIMMISGENVYSKLKYESGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EI+I++ D R D Y ASGAGGQHVN T SAVR
Sbjct: 185 RVPSTESQGRIHTSTATVVVMP-EAEEVEIDIADKDIRTDIYHASGAGGQHVNKTASAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q ERSQ KN+ +A  +LRA++Y+    ++E  +    + K+ +G G  
Sbjct: 244 LTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYDQI--QQEARSEYDANRKSAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIIDALIMYDQ 347


>gi|229545076|ref|ZP_04433801.1| peptide chain release factor 1 [Enterococcus faecalis TX1322]
 gi|307287617|ref|ZP_07567660.1| peptide chain release factor 1 [Enterococcus faecalis TX0109]
 gi|229309968|gb|EEN75955.1| peptide chain release factor 1 [Enterococcus faecalis TX1322]
 gi|306501355|gb|EFM70658.1| peptide chain release factor 1 [Enterococcus faecalis TX0109]
 gi|315165014|gb|EFU09031.1| peptide chain release factor 1 [Enterococcus faecalis TX1302]
          Length = 357

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 107/347 (30%), Positives = 174/347 (50%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---DNLIL 72
             +   R   L     DP +  +      L +E  +    +   +  +  +    D   L
Sbjct: 5   LQSIEDRYEELGELLSDPAVISDTKRFMELSKEEANTRETVEVYRRYKQVVEGISDAEEL 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L   L+ +   + +E   +L++ K  +E + +   L     D  +  +E+   AGG E+ 
Sbjct: 65  LSENLDAEMAEMAKEELSDLKKEKEVLEDRIKILLLPKDPNDDKNIIMEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY ++AE + +K E LE +     G K   ++I G N +  LK E G HR+ 
Sbjct: 125 LFAGDLFNMYQKYAEAQGWKVEVLEANVTGIGGYKEVIMMISGDNVFSKLKYESGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EIE+++ D R+D Y ASGAGGQHVN T SAVR
Sbjct: 185 RVPSTESQGRIHTSTATVVVMP-EAEEVEIELADKDIRVDIYHASGAGGQHVNKTASAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q ERSQ KN+ +A  +LRA++Y+    ++E  +    + K+ +G G  
Sbjct: 244 LTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYDQI--QQEAQSEYDANRKSAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIIDALVLYDQ 347


>gi|194332966|ref|YP_002014826.1| peptide chain release factor 1 [Prosthecochloris aestuarii DSM 271]
 gi|238693294|sp|B4S385|RF1_PROA2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|194310784|gb|ACF45179.1| peptide chain release factor 1 [Prosthecochloris aestuarii DSM 271]
          Length = 357

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 112/348 (32%), Positives = 179/348 (51%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++A      L  +  DP +  +    + L +E   L   +               +L +
Sbjct: 5   LESAKDHYIRLEEQLSDPDIIGDQQRFRKLNKEYSDLKEIVQAYDRYISNRRQIEEVLGM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
             +E D  +     +    +  +    + +         EADS +  +E+ AG GG E+ 
Sbjct: 65  LAKESDPEMKALAEEEYNELLADQPELEQQLKLLLLPKDEADSRNVIMEIRAGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKGPNAYGWLKGEQGVHRL 190
            +A  LLRMY R+AE+R +K E LE ++    G  K A++ I G + YG +K E GVHR+
Sbjct: 125 LFATDLLRMYQRFAERRGWKCELLEFNEANTPGACKEASMAISGHDVYGIMKFESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +S+ V P   + ++IEI + D R+DT+R+ G GGQ+VN  ++AV
Sbjct: 185 QRVPETETQGRIHTSAASVAVLP-EAEEVDIEIRKDDLRVDTFRSGGKGGQNVNKVETAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH P+G+VV CQ+ERSQ +N+ +A  MLRAKLY+ EL  + +        K+ +  G 
Sbjct: 244 RITHAPSGIVVACQEERSQLQNRERAMKMLRAKLYDRELADKNKERADL--RKSMVSSGD 301

Query: 311 Q---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +   IR+Y   P   V D R      +   +LDG+LDD ++A    ++
Sbjct: 302 RSAKIRTYNF-PQSRVTDHRIGYTSHALPQILDGNLDDLIEALKLYEQ 348


>gi|253702392|ref|YP_003023581.1| peptide chain release factor 1 [Geobacter sp. M21]
 gi|251777242|gb|ACT19823.1| peptide chain release factor 1 [Geobacter sp. M21]
          Length = 359

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 108/333 (32%), Positives = 173/333 (51%), Gaps = 10/333 (3%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LILLELALEEDDCSIL 85
              DP +  N  E + L +E   L   ++  +E +  L D      LL+   +E      
Sbjct: 20  LLSDPEVLANQTEFRKLSKEHSGLAELVAAYREYKKILSDIDDNKELLKEPDQEMREMAQ 79

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E      R +      +   L     D  +  LE+ AG GG ES  +A  L RMY+R+A
Sbjct: 80  AELLSLEARREELEGEIKLLLLPKDPNDDKNVVLEIRAGTGGDESALFAGDLFRMYSRFA 139

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E  +++ E +   + E+ G K    L++G   +  LK E G HR+ R+   ++  R HTS
Sbjct: 140 ETNRWRVEIISASESEKGGFKEVIALVEGTGVFAKLKYESGTHRVQRVPETEAQGRIHTS 199

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
             ++ V P   + ++I+I+ +D +ID YR+SGAGGQHVNTTDSAVRITH+PTG VV CQ+
Sbjct: 200 ACTVAVMP-EAEDVDIDINPADLKIDVYRSSGAGGQHVNTTDSAVRITHLPTGTVVACQE 258

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQM 322
           ERSQ KN+A+A  +L++++ +  L ++   A +    K+++G G    +IR+Y   P   
Sbjct: 259 ERSQIKNRAKAMKVLKSRILDNILMEQN--AKLAADRKSQVGSGDRSERIRTYNF-PQGR 315

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           + D R  +       ++ GD+ +   +  A  +
Sbjct: 316 MTDHRIGLTLYRLDAIMAGDIAEIADSLRAHYQ 348


>gi|325921457|ref|ZP_08183312.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas
           gardneri ATCC 19865]
 gi|325548004|gb|EGD19003.1| bacterial peptide chain release factor 1 (bRF-1) [Xanthomonas
           gardneri ATCC 19865]
          Length = 361

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 112/345 (32%), Positives = 175/345 (50%), Gaps = 8/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L     DP +  N  + + L RE   L+     +++      D      +
Sbjct: 9   LEALAERREELQHLLSDPEVVSNNDKFRTLSRELSQLEPLAVALEDEARAKADLSAAEAM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E     Q    E++ +     +     D  + +LEV AG GG E+  +A
Sbjct: 69  RNDPEMRELAEEEIATAQARLDELDAQLALLLVPRDPRDEGNLFLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+AE++ +K E      GE  G K     + G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ + P  DD  EI I+ +D ++DT+R+SGAGGQHVN T+SA+RITH
Sbjct: 189 ATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDTFRSSGAGGQHVNKTESAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311
           +P+GVVV+CQ ERSQH N+ +A   L+A+L E E  K    A   ++ K ++G G    +
Sbjct: 249 VPSGVVVECQTERSQHANRDKAMKRLKAQLVEAERSK--AAAAEAQTRKLQVGSGDRSQR 306

Query: 312 IRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R   +      ++++GDLD  +   L   +
Sbjct: 307 IRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIARLLHEHQ 350


>gi|89900074|ref|YP_522545.1| peptide chain release factor 1 [Rhodoferax ferrireducens T118]
 gi|119361589|sp|Q21YY9|RF1_RHOFD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|89344811|gb|ABD69014.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodoferax
           ferrireducens T118]
          Length = 366

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 120/347 (34%), Positives = 182/347 (52%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72
                 RL  L        + Q++ +  +L RE   +    S     Q    D      L
Sbjct: 9   LARYTDRLGELEFLLSREDIMQDMKQFLLLSREHTEVGAVASRWARYQQLEADLSGAQEL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTES 130
           L  ++++ D + + +   +    +L+    + + +L  +      +A++E+ AG GG ES
Sbjct: 69  LRGSVDDPDMTAMAQEEIDNASAELQKLENELQRMLLPKDPDDARNAFVEIRAGTGGDES 128

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LLRMYTR+ E+R +K E +     E  G K   + I+G + YG LK E G HR+
Sbjct: 129 ALFAADLLRMYTRYCERRGWKAEIISESPSELGGYKEVVIKIEGDHVYGALKFESGGHRV 188

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS  ++ V    D+++ I+I+ +D RIDTYRASGAGGQH+N TDSAV
Sbjct: 189 QRVPVTETQGRIHTSACTVAVLAEPDEAVAIQINPADLRIDTYRASGAGGQHINKTDSAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+V +CQ  RSQH NKAQA  +L A++   E  + E  A      K  IG G 
Sbjct: 249 RITHLPTGIVAECQDGRSQHSNKAQALKVLTARI--HEKDRSERAAKDAAERKGLIGSGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +IR+Y   P   + D R N+       +++GDLDD ++A  A +
Sbjct: 307 RSDRIRTYNF-PQGRLTDHRINLTLYKLLTIMEGDLDDVVQALQAFE 352


>gi|257867023|ref|ZP_05646676.1| peptide chain release factor 1 [Enterococcus casseliflavus EC30]
 gi|257873358|ref|ZP_05653011.1| peptide chain release factor 1 [Enterococcus casseliflavus EC10]
 gi|257877101|ref|ZP_05656754.1| peptide chain release factor 1 [Enterococcus casseliflavus EC20]
 gi|325568363|ref|ZP_08144730.1| peptide chain release factor RF1 [Enterococcus casseliflavus ATCC
           12755]
 gi|257801079|gb|EEV30009.1| peptide chain release factor 1 [Enterococcus casseliflavus EC30]
 gi|257807522|gb|EEV36344.1| peptide chain release factor 1 [Enterococcus casseliflavus EC10]
 gi|257811267|gb|EEV40087.1| peptide chain release factor 1 [Enterococcus casseliflavus EC20]
 gi|325158132|gb|EGC70285.1| peptide chain release factor RF1 [Enterococcus casseliflavus ATCC
           12755]
          Length = 357

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 102/347 (29%), Positives = 167/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E  +    +   +  ++ +       E+
Sbjct: 5   LQAIEDRYEELGELLSDPAVISDTKRFMQLSKEEANTRETVEVYRRYKEVVEGIKDTEEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E  D  + +   + L  +K E +  +       L     D  +  +E+   AGG E+ 
Sbjct: 65  LGENLDAEMAEMAKEELSDLKKEKDVLEERIKILLLPKDPNDDKNIIMEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY ++AE + +K E ++ +     G K   ++I G N +  LK E G HR+ 
Sbjct: 125 LFAGDLFNMYQKYAENQGWKVEVMDANVTGIGGYKEVIMMITGDNVFSKLKYESGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EI+I++ D R D Y ASGAGGQHVN T SAVR
Sbjct: 185 RVPSTESQGRIHTSTATVVVMP-EAEEVEIDIADKDIRTDIYHASGAGGQHVNKTASAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+ V  Q ERSQ KN+ +A  +LRA++Y+    ++E  +    + K+ +G G  
Sbjct: 244 LTHLPTGIAVAMQDERSQLKNREKAMKVLRARVYD--QMQQEAQSEYDANRKSAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIVDALIVYDQ 347


>gi|29377042|ref|NP_816196.1| peptide chain release factor 1 [Enterococcus faecalis V583]
 gi|227519760|ref|ZP_03949809.1| peptide chain release factor 1 [Enterococcus faecalis TX0104]
 gi|227554052|ref|ZP_03984099.1| peptide chain release factor 1 [Enterococcus faecalis HH22]
 gi|229549320|ref|ZP_04438045.1| peptide chain release factor 1 [Enterococcus faecalis ATCC 29200]
 gi|255972029|ref|ZP_05422615.1| peptide chain release factor 1 [Enterococcus faecalis T1]
 gi|255975086|ref|ZP_05425672.1| peptide chain release factor 1 [Enterococcus faecalis T2]
 gi|256616929|ref|ZP_05473775.1| peptide chain release factor 1 [Enterococcus faecalis ATCC 4200]
 gi|256763197|ref|ZP_05503777.1| peptide chain release factor 1 [Enterococcus faecalis T3]
 gi|256853870|ref|ZP_05559235.1| peptide chain release factor 1 [Enterococcus faecalis T8]
 gi|256957798|ref|ZP_05561969.1| peptide chain release factor 1 [Enterococcus faecalis DS5]
 gi|256961203|ref|ZP_05565374.1| peptide chain release factor 1 [Enterococcus faecalis Merz96]
 gi|256963678|ref|ZP_05567849.1| peptide chain release factor 1 [Enterococcus faecalis HIP11704]
 gi|257079736|ref|ZP_05574097.1| peptide chain release factor 1 [Enterococcus faecalis JH1]
 gi|257081918|ref|ZP_05576279.1| peptide chain release factor 1 [Enterococcus faecalis E1Sol]
 gi|257084460|ref|ZP_05578821.1| peptide chain release factor 1 [Enterococcus faecalis Fly1]
 gi|257087541|ref|ZP_05581902.1| peptide chain release factor 1 [Enterococcus faecalis D6]
 gi|257090700|ref|ZP_05585061.1| peptide chain release factor 1 [Enterococcus faecalis CH188]
 gi|257416748|ref|ZP_05593742.1| peptide chain release factor 1 [Enterococcus faecalis AR01/DG]
 gi|257419965|ref|ZP_05596959.1| peptide chain release factor [Enterococcus faecalis T11]
 gi|293384152|ref|ZP_06630046.1| peptide chain release factor 1 [Enterococcus faecalis R712]
 gi|293386966|ref|ZP_06631535.1| peptide chain release factor 1 [Enterococcus faecalis S613]
 gi|294779688|ref|ZP_06745078.1| peptide chain release factor 1 [Enterococcus faecalis PC1.1]
 gi|300861212|ref|ZP_07107299.1| peptide chain release factor 1 [Enterococcus faecalis TUSoD Ef11]
 gi|307270729|ref|ZP_07552020.1| peptide chain release factor 1 [Enterococcus faecalis TX4248]
 gi|307271624|ref|ZP_07552895.1| peptide chain release factor 1 [Enterococcus faecalis TX0855]
 gi|307276806|ref|ZP_07557917.1| peptide chain release factor 1 [Enterococcus faecalis TX2134]
 gi|307285597|ref|ZP_07565736.1| peptide chain release factor 1 [Enterococcus faecalis TX0860]
 gi|307290429|ref|ZP_07570344.1| peptide chain release factor 1 [Enterococcus faecalis TX0411]
 gi|312899933|ref|ZP_07759251.1| peptide chain release factor 1 [Enterococcus faecalis TX0470]
 gi|312905241|ref|ZP_07764361.1| peptide chain release factor 1 [Enterococcus faecalis TX0635]
 gi|312907897|ref|ZP_07766880.1| peptide chain release factor 1 [Enterococcus faecalis DAPTO 512]
 gi|312953588|ref|ZP_07772425.1| peptide chain release factor 1 [Enterococcus faecalis TX0102]
 gi|312978574|ref|ZP_07790312.1| peptide chain release factor 1 [Enterococcus faecalis DAPTO 516]
 gi|46576782|sp|Q831F6|RF1_ENTFA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|29344508|gb|AAO82266.1| peptide chain release factor 1 [Enterococcus faecalis V583]
 gi|227072848|gb|EEI10811.1| peptide chain release factor 1 [Enterococcus faecalis TX0104]
 gi|227176800|gb|EEI57772.1| peptide chain release factor 1 [Enterococcus faecalis HH22]
 gi|229305557|gb|EEN71553.1| peptide chain release factor 1 [Enterococcus faecalis ATCC 29200]
 gi|255963047|gb|EET95523.1| peptide chain release factor 1 [Enterococcus faecalis T1]
 gi|255967958|gb|EET98580.1| peptide chain release factor 1 [Enterococcus faecalis T2]
 gi|256596456|gb|EEU15632.1| peptide chain release factor 1 [Enterococcus faecalis ATCC 4200]
 gi|256684448|gb|EEU24143.1| peptide chain release factor 1 [Enterococcus faecalis T3]
 gi|256710813|gb|EEU25856.1| peptide chain release factor 1 [Enterococcus faecalis T8]
 gi|256948294|gb|EEU64926.1| peptide chain release factor 1 [Enterococcus faecalis DS5]
 gi|256951699|gb|EEU68331.1| peptide chain release factor 1 [Enterococcus faecalis Merz96]
 gi|256954174|gb|EEU70806.1| peptide chain release factor 1 [Enterococcus faecalis HIP11704]
 gi|256987766|gb|EEU75068.1| peptide chain release factor 1 [Enterococcus faecalis JH1]
 gi|256989948|gb|EEU77250.1| peptide chain release factor 1 [Enterococcus faecalis E1Sol]
 gi|256992490|gb|EEU79792.1| peptide chain release factor 1 [Enterococcus faecalis Fly1]
 gi|256995571|gb|EEU82873.1| peptide chain release factor 1 [Enterococcus faecalis D6]
 gi|256999512|gb|EEU86032.1| peptide chain release factor 1 [Enterococcus faecalis CH188]
 gi|257158576|gb|EEU88536.1| peptide chain release factor 1 [Enterococcus faecalis ARO1/DG]
 gi|257161793|gb|EEU91753.1| peptide chain release factor [Enterococcus faecalis T11]
 gi|291078632|gb|EFE15996.1| peptide chain release factor 1 [Enterococcus faecalis R712]
 gi|291083636|gb|EFE20599.1| peptide chain release factor 1 [Enterococcus faecalis S613]
 gi|294453242|gb|EFG21654.1| peptide chain release factor 1 [Enterococcus faecalis PC1.1]
 gi|295113546|emb|CBL32183.1| bacterial peptide chain release factor 1 (bRF-1) [Enterococcus sp.
           7L76]
 gi|300850251|gb|EFK78001.1| peptide chain release factor 1 [Enterococcus faecalis TUSoD Ef11]
 gi|306498622|gb|EFM68124.1| peptide chain release factor 1 [Enterococcus faecalis TX0411]
 gi|306502821|gb|EFM72086.1| peptide chain release factor 1 [Enterococcus faecalis TX0860]
 gi|306506443|gb|EFM75602.1| peptide chain release factor 1 [Enterococcus faecalis TX2134]
 gi|306511502|gb|EFM80501.1| peptide chain release factor 1 [Enterococcus faecalis TX0855]
 gi|306513039|gb|EFM81680.1| peptide chain release factor 1 [Enterococcus faecalis TX4248]
 gi|310625988|gb|EFQ09271.1| peptide chain release factor 1 [Enterococcus faecalis DAPTO 512]
 gi|310628426|gb|EFQ11709.1| peptide chain release factor 1 [Enterococcus faecalis TX0102]
 gi|310631478|gb|EFQ14761.1| peptide chain release factor 1 [Enterococcus faecalis TX0635]
 gi|311288723|gb|EFQ67279.1| peptide chain release factor 1 [Enterococcus faecalis DAPTO 516]
 gi|311292929|gb|EFQ71485.1| peptide chain release factor 1 [Enterococcus faecalis TX0470]
 gi|315025302|gb|EFT37234.1| peptide chain release factor 1 [Enterococcus faecalis TX2137]
 gi|315030387|gb|EFT42319.1| peptide chain release factor 1 [Enterococcus faecalis TX4000]
 gi|315032691|gb|EFT44623.1| peptide chain release factor 1 [Enterococcus faecalis TX0017]
 gi|315035852|gb|EFT47784.1| peptide chain release factor 1 [Enterococcus faecalis TX0027]
 gi|315143714|gb|EFT87730.1| peptide chain release factor 1 [Enterococcus faecalis TX2141]
 gi|315148532|gb|EFT92548.1| peptide chain release factor 1 [Enterococcus faecalis TX4244]
 gi|315150059|gb|EFT94075.1| peptide chain release factor 1 [Enterococcus faecalis TX0012]
 gi|315151855|gb|EFT95871.1| peptide chain release factor 1 [Enterococcus faecalis TX0031]
 gi|315159264|gb|EFU03281.1| peptide chain release factor 1 [Enterococcus faecalis TX0312]
 gi|315161810|gb|EFU05827.1| peptide chain release factor 1 [Enterococcus faecalis TX0645]
 gi|315168548|gb|EFU12565.1| peptide chain release factor 1 [Enterococcus faecalis TX1341]
 gi|315170191|gb|EFU14208.1| peptide chain release factor 1 [Enterococcus faecalis TX1342]
 gi|315172490|gb|EFU16507.1| peptide chain release factor 1 [Enterococcus faecalis TX1346]
 gi|315574712|gb|EFU86903.1| peptide chain release factor 1 [Enterococcus faecalis TX0309B]
 gi|315579264|gb|EFU91455.1| peptide chain release factor 1 [Enterococcus faecalis TX0630]
 gi|315580976|gb|EFU93167.1| peptide chain release factor 1 [Enterococcus faecalis TX0309A]
 gi|323481494|gb|ADX80933.1| peptide chain release factor 1 [Enterococcus faecalis 62]
 gi|327535788|gb|AEA94622.1| peptide chain release factor RF1 [Enterococcus faecalis OG1RF]
 gi|329578086|gb|EGG59499.1| peptide chain release factor 1 [Enterococcus faecalis TX1467]
          Length = 357

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 107/347 (30%), Positives = 174/347 (50%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---DNLIL 72
             +   R   L     DP +  +      L +E  +    +   +  +  +    D   L
Sbjct: 5   LQSIEDRYEELGELLSDPAVISDTKRFMELSKEEANTRETVEVYRRYKQVVEGISDAEEL 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L   L+ +   + +E   +L++ K  +E + +   L     D  +  +E+   AGG E+ 
Sbjct: 65  LSENLDAEMAEMAKEELSDLKKEKEVLEDRIKILLLPKDPNDDKNIIMEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY ++AE + +K E LE +     G K   ++I G N +  LK E G HR+ 
Sbjct: 125 LFAGDLFNMYQKYAEAQGWKAEVLEANVTGIGGYKEVIMMISGDNVFSKLKYESGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EIE+++ D R+D Y ASGAGGQHVN T SAVR
Sbjct: 185 RVPSTESQGRIHTSTATVVVMP-EAEEVEIELADKDIRVDIYHASGAGGQHVNKTASAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q ERSQ KN+ +A  +LRA++Y+    ++E  +    + K+ +G G  
Sbjct: 244 LTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYDQI--QQEAQSEYDANRKSAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIIDALVLYDQ 347


>gi|169832291|ref|YP_001718273.1| peptide chain release factor 1 [Candidatus Desulforudis audaxviator
           MP104C]
 gi|238688348|sp|B1I6L2|RF1_DESAP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169639135|gb|ACA60641.1| peptide chain release factor 1 [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 355

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 112/347 (32%), Positives = 187/347 (53%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+   +   LN    DP + Q+    +  ++    +   ++  +E +    +     ++
Sbjct: 5   LDHLEAKYEELNRLISDPVVIQDQERWRGYVKSHAEIGEVVAVYREYKRVAAEMDDARQM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  + +     ++ ++   +  +             D  +  +E+ AG GG E+ 
Sbjct: 65  LREEQDAELRELAESEVEVLRERSDELRRRLRVLLLPKDPNDEKNVIIEIRAGTGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY R+AE+R ++ E L +++ +  GIK A +L++G  AY  LK E GVHR+ 
Sbjct: 125 LFAGDLLRMYLRYAERRGWRAEMLNVNETDLGGIKEAIVLLEGRGAYSELKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +++EI   D RID + ++G GGQ VNTT SAVR
Sbjct: 185 RVPATESGGRIHTSAATVAVLP-EAEEVDVEIRPEDLRIDVFCSTGPGGQSVNTTQSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+P+G+VV CQ E+SQHKN+ +A  +LRA+L +   Q+++E   I  S KT++G G  
Sbjct: 244 VTHLPSGIVVSCQDEKSQHKNRDKAMKVLRARLLDKAQQEQQE--RIASSRKTQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R N+      +VL GDL +F+ A +   +
Sbjct: 302 SERIRTYNF-PQNRVTDHRLNLTLYRLEEVLQGDLHEFVSALITSDQ 347


>gi|296111565|ref|YP_003621947.1| peptide chain release factor 1 [Leuconostoc kimchii IMSNU 11154]
 gi|295833097|gb|ADG40978.1| peptide chain release factor 1 [Leuconostoc kimchii IMSNU 11154]
          Length = 357

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 95/344 (27%), Positives = 174/344 (50%), Gaps = 8/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               V R   LN +  DP +  +  +   L++E   + + ++     +  + +     ++
Sbjct: 8   LQTVVDRYDELNEQLADPEVAGDGQKYMALLKEAGEMRDTVAAYTRYKQVIQEIQDAEDM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E  + L+  K +     +   L     D  +  +E+   AGG ES  +A
Sbjct: 68  LDDDELAPLAKEDLNTLRPEKSDLEAQLKILMLPKDPNDDKNIIMEIRGAAGGDESSLFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LL MY R+AEK+++    ++    E  G K   ++I G N Y  LK E G HR+ R+ 
Sbjct: 128 ADLLDMYRRYAEKQRWALSIIDETTTEVGGYKEVAIMISGDNVYSKLKFESGAHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P  ++ I+ E++ESD   + +R+ GAGGQ+VN   +AVR+ H
Sbjct: 188 STETQGRVHTSTATVGVMPEFEE-IDFELAESDLEEEFFRSGGAGGQNVNKVSTAVRLVH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            PTG++V+ Q+ER+Q KN+ +A  +L +++Y+   Q+ E      E  K+ +G G    +
Sbjct: 247 KPTGMMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNEAE--YAEKRKSAVGTGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R  +       +++GDL + + A +   +
Sbjct: 305 IRTYNY-PQNRVTDHRIGLTLNKLDRIMNGDLGEIIDAFVIADQ 347


>gi|238921196|ref|YP_002934711.1| peptide chain release factor 2, [Edwardsiella ictaluri 93-146]
 gi|238870765|gb|ACR70476.1| peptide chain release factor 2, putative [Edwardsiella ictaluri
           93-146]
 gi|304560096|gb|ADM42760.1| Peptide chain release factor 2 [Edwardsiella tarda FL6-60]
          Length = 293

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 169/292 (57%), Positives = 211/292 (72%), Gaps = 1/292 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+E DD     E    L  + +++   +F  + SGE DS D YL++
Sbjct: 1   MHQGLEDVSGLLELAVEADDEETFNEAVAELDLLDVKLGQLEFRRMFSGEYDSADCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  +GE AG+KSAT+ I G  AYGWL
Sbjct: 61  QAGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESEGEVAGLKSATIKISGDYAYGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E 
Sbjct: 181 HVNKTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAERQQMED 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT++E  +   VLDGDLD F++A+L  
Sbjct: 241 TKSDIGWGSQIRSYVLDD-SRIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 291


>gi|242280071|ref|YP_002992200.1| peptide chain release factor 1 [Desulfovibrio salexigens DSM 2638]
 gi|259585219|sp|C6BYQ4|RF1_DESAD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|242122965|gb|ACS80661.1| peptide chain release factor 1 [Desulfovibrio salexigens DSM 2638]
          Length = 357

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 104/346 (30%), Positives = 176/346 (50%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72
            ++  +    L  +  DP ++ N    + +      L + ++  +E +     L DN  +
Sbjct: 5   LEDIERSFMDLEQELADPEVYNNQERYRKVTMAHAELGDVVAAFREYKQLSADLEDNKEM 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            + +  E       E ++   R+    E  +   L     D  +  LE+ AG GG E+  
Sbjct: 65  AKDSDPEIREMAEMEIAEIKDRLPKLEEELKLLLLPKDPMDGKNIILEIRAGTGGEEAAL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE   +K E +  +     G K     I G   Y  +K E G HR+ R
Sbjct: 125 FAADLFRMYSRFAESNGWKVEVMNSNPTGTGGFKEIIAAISGSRIYSMMKYESGTHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ + P   + +++++   D RID +RASG GGQ VNTTDSA+RI
Sbjct: 185 VPATETQGRIHTSAATVAIMP-EAEEVDVQVRNEDLRIDVFRASGPGGQSVNTTDSAIRI 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV CQ E+SQHKNKA+A  +L ++L + E  K+     + E  + ++G G   
Sbjct: 244 THLPTGLVVICQDEKSQHKNKAKAMKVLCSRLLQAEQDKQHAE--MAEQRRAQVGSGDRS 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+       V++GD+ + +++ ++  +
Sbjct: 302 ERIRTYNF-PQGRVTDHRINLTLYKLDAVIEGDMQELVESLISHYQ 346


>gi|289663473|ref|ZP_06485054.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289667596|ref|ZP_06488671.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 361

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 112/345 (32%), Positives = 173/345 (50%), Gaps = 8/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA-ISFIKEIQDRLCDNLILLE 74
            +   +R   L     DP +  N  + + L RE   L+   ++   E + +         
Sbjct: 9   LEALAERREELQHLLSDPDVVNNNDKFRTLSRELSQLEPVAVALEDETRAKADLAAAEAM 68

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
            +  E      +E +    R++          +     D  + +LEV AG GG E+  +A
Sbjct: 69  RSDPEMRELAEEEIAAAQARLEELDAQLALLLVPRDPRDDGNLFLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+AE++ +K E      GE  G K     + G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ + P  DD  EI I+ +D ++DT+R+SGAGGQHVN T+SA+RITH
Sbjct: 189 ATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDTFRSSGAGGQHVNKTESAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311
           +P+GVVV+CQ ERSQH N+ +A   L+A+L E E  K    A   ++ K ++G G    +
Sbjct: 249 VPSGVVVECQTERSQHANRDKAMKRLKAQLAEAERSK--AAAAEAQTRKLQVGSGDRSQR 306

Query: 312 IRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R   +      ++++GDLD  +   L   +
Sbjct: 307 IRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIARLLHEHQ 350


>gi|260433480|ref|ZP_05787451.1| peptide chain release factor 1 [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260417308|gb|EEX10567.1| peptide chain release factor 1 [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 351

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 173/344 (50%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QR  +L     D     ++     L +E   L   +  I   +    D      +
Sbjct: 7   LEQITQRFQYLEAAMSDGASGGDIA---ALAKEYSDLKPVVEQIAAWRQLRADLAEAEAM 63

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E    L+          Q   L    AD+  A LE+  G GG E+  +A
Sbjct: 64  LGDPDMKELAEEEIPQLKARIPEAEHALQLALLPKDAADARPAMLEIRPGTGGDEAALFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE R ++ E +E    E  GIK     IKG N +  LK E GVHR+ R+ 
Sbjct: 124 GDLLRMYQRYAEARGWQFEIIEEQHTELGGIKEVVAHIKGDNVFARLKYESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++I+I  +D RIDT R+SGAGGQHVNTTDSAVRITH
Sbjct: 184 ETESGGRIHTSAATVAVLP-EAEDVDIQIDPNDIRIDTMRSSGAGGQHVNTTDSAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV    E+SQH+N+  A  +L+ +LY+LE Q+ +          +++G G    +
Sbjct: 243 LPTGIVVTSS-EKSQHRNREIAMQVLKTRLYDLERQRIDSER--SADRASQVGSGDRSER 299

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++ GDLD+ + A  A  +
Sbjct: 300 IRTYNF-PQGRMTDHRINLTLYKLDQIMQGDLDEVIDALTADDQ 342


>gi|51245661|ref|YP_065545.1| peptide chain release factor 2 [Desulfotalea psychrophila LSv54]
 gi|50876698|emb|CAG36538.1| probable peptide chain release factor 2 [Desulfotalea psychrophila
           LSv54]
          Length = 285

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 159/285 (55%), Positives = 207/285 (72%)

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           +LLE+A EE D  I QE +  L      +   + E +  GE DS +A + +HAGAGGTE+
Sbjct: 1   MLLEMAAEEGDQEIEQEIALKLGSFANALAAIELECMFIGEHDSCNAIISIHAGAGGTEA 60

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDW ++LLRMY RWAE+ KFKTE L++  G+EAG KS T+LIKG  AYG+L+ E G+HRL
Sbjct: 61  QDWTDILLRMYLRWAERHKFKTEILDLLPGDEAGTKSITILIKGQWAYGYLRSELGIHRL 120

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VRISP+D++ RRHTSF+S+ V P +D++++++I E D R+DTYRASGAGGQHVN TDSA+
Sbjct: 121 VRISPFDTSGRRHTSFASVMVMPELDNTVDVDIDEKDLRVDTYRASGAGGQHVNKTDSAI 180

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+TH+PTGVVVQCQ ERSQH+NK  A  ML A++Y+LE QK+ +        K  I WG 
Sbjct: 181 RLTHLPTGVVVQCQNERSQHRNKEMAMKMLIAQIYQLEKQKKADQQEGLHGEKKGISWGS 240

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           QIRSYVLQPY+++KD RT+ E  +   VLDG LD F+KA L   K
Sbjct: 241 QIRSYVLQPYRLIKDHRTDFEAGNVDAVLDGGLDGFIKAFLLWGK 285


>gi|212213085|ref|YP_002304021.1| peptide chain release factor 2 [Coxiella burnetii CbuG_Q212]
 gi|212011495|gb|ACJ18876.1| bacterial peptide chain release factor 2 [Coxiella burnetii
           CbuG_Q212]
          Length = 289

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 160/282 (56%), Positives = 212/282 (75%), Gaps = 1/282 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           + +L+ +E D  ++ + + + ++++  +   +F+ + SGE DSN+AYL++ AG+GGTE+Q
Sbjct: 1   MAQLSKQEKDTDLITDLNKDFKQLEKTIAEMEFQRMFSGEMDSNNAYLDIQAGSGGTEAQ 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA MLLRMY RW +K  F T  +E   GE AGIKSAT+   G  AYGWL+ E GVHRLV
Sbjct: 61  DWAEMLLRMYLRWGDKHGFTTTLMEASPGEVAGIKSATIEFTGSYAYGWLRSETGVHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS +RRHTSF+S++V P +DD IEIEI+ ++ RIDTYRASGAGGQHVN TDSAVR
Sbjct: 121 RKSPFDSGNRRHTSFASVFVSPEIDDDIEIEINPAELRIDTYRASGAGGQHVNRTDSAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+P+G+VVQCQ +RSQHKNKAQA   LRAKLYE+E+ K++E   + E+SK+EI WG Q
Sbjct: 181 ITHLPSGIVVQCQNDRSQHKNKAQAMKQLRAKLYEMEMMKQQEKQALLEASKSEISWGNQ 240

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IRSYVL     VKDLRT +E ++   VLDGD+D F++A L  
Sbjct: 241 IRSYVLD-ASRVKDLRTGVETSNTQAVLDGDIDLFIEACLKQ 281


>gi|29840418|ref|NP_829524.1| peptide chain release factor 1 [Chlamydophila caviae GPIC]
 gi|33301431|sp|Q822M2|RF1_CHLCV RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|29834767|gb|AAP05402.1| peptide chain release factor 1 [Chlamydophila caviae GPIC]
          Length = 361

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 111/340 (32%), Positives = 178/340 (52%), Gaps = 11/340 (3%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLELAL 77
           +RL  +  K  +P +++N  E   L +E   L    +   ++   +  L D+   L    
Sbjct: 10  KRLEEVEVKISNPEIFENPKEYSSLSKEHARLSELKNVYDKVLGQEKILNDDKEALAQEK 69

Query: 78  EEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           + +  ++L+E     +    ++    +   +     D  +  +E+ AG GG E+  +   
Sbjct: 70  DPEMIAMLEEGIQLGKAEVDKLYKVLENLLVPPDPDDDLNVIMELRAGTGGDEAALFVGD 129

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
            +RMY  +A  + +K E L   + +  G K   + I G      L+ E G HR+ R+   
Sbjct: 130 CVRMYHLYASTKGWKYEVLSASESDIGGYKEYVMGISGAAVKRLLQYEAGTHRVQRVPET 189

Query: 197 DSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           ++  R HTS  ++ V P   +D  E+ I E D +IDT+RASGAGGQHVN TDSAVRITH+
Sbjct: 190 ETQGRVHTSAITVAVLPEPAEDDEEVFIDEKDLKIDTFRASGAGGQHVNVTDSAVRITHL 249

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTGVVV CQ ERSQHKNKA+A  +L+A++ + E+Q+R++ A+   S   ++G G    +I
Sbjct: 250 PTGVVVTCQDERSQHKNKAKAMRILKARIRDAEMQRRQKEASAMRS--AQVGSGDRSERI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           R+Y       V D R  +   +   V++GDLD    A ++
Sbjct: 308 RTYNFS-QNRVTDHRIGLTLYNLDKVMEGDLDAITSALVS 346


>gi|304440460|ref|ZP_07400349.1| peptide chain release factor RF1 [Peptoniphilus duerdenii ATCC
           BAA-1640]
 gi|304371212|gb|EFM24829.1| peptide chain release factor RF1 [Peptoniphilus duerdenii ATCC
           BAA-1640]
          Length = 355

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 117/346 (33%), Positives = 185/346 (53%), Gaps = 12/346 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN-- 69
           +F+       R   L     +  +  N    +    E   L+  +   +E +    D   
Sbjct: 1   MFENIQVFEDRYVELEKDLVNVDVINNSALYQKTAIEHAELEPIVHKYREYKKLEEDLSG 60

Query: 70  -LILLELALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              LL   L++D   ++++   N+++  +   E  +   +     D+ +  +E+ AGAGG
Sbjct: 61  NKELLTEDLDDDMLQLVKDDIKNIEQELEKVTEELKRLLVPKDPNDNKNVIVEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A +LLR Y  +AEK  FKT+ +  ++    G K    +I+G  AY  LK E GV
Sbjct: 121 DEAALFAGVLLRQYLMYAEKCGFKTDIMSTNEIGIGGYKEVVFMIEGKGAYSKLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS +++ V P   + +EIEI  SD R+D +R+SG GGQ VNTTD
Sbjct: 181 HRVQRVPETESSGRIHTSTATVAVLP-EAEDVEIEIDPSDIRVDVFRSSGNGGQSVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+V+ CQ E+SQ KNK +A  +L+ KLY+LELQK+ +   +    +++IG
Sbjct: 240 SAVRITHLPTGIVISCQDEKSQLKNKEKAMKILKTKLYDLELQKQAQE--LSAEKRSQIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            G    +IR+Y   P   V D R  +       + +GDLD+ + A 
Sbjct: 298 SGDRSERIRTYNY-PQGRVTDHRIGLTSHRIDAINNGDLDEIIDAL 342


>gi|78046531|ref|YP_362706.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|119361637|sp|Q3BX07|RF1_XANC5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78034961|emb|CAJ22606.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 361

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 112/345 (32%), Positives = 174/345 (50%), Gaps = 8/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L     DP +  N    + L RE   L+     ++E      D      L
Sbjct: 9   LEALAERREELQHLLSDPDVVGNNDTFRTLSRELSQLEPVAMALEEEARAKADLATAEAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQF-ESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E     Q    +++ +     +     D  + +LEV AG GG E+  +A
Sbjct: 69  RNDPEMRELAEEEIAAAQARLEQLDAQLASLLVPRDPRDDGNLFLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+AE++ +K E      GE  G K     + G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ + P  DD  EI I+ +D ++DT+R+SGAGGQHVN T+SA+RITH
Sbjct: 189 ATESQGRIHTSAATVAIIPEADDVEEITINPADLKVDTFRSSGAGGQHVNKTESAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311
           +P+GVVV+CQ ERSQH N+ +A   L+A+L + E  K    A   ++ K ++G G    +
Sbjct: 249 VPSGVVVECQTERSQHANRDKAMKRLKAQLLDAERSK--AAAAEAQTRKLQVGSGDRSQR 306

Query: 312 IRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R   +      ++++GDLD  +   L   +
Sbjct: 307 IRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIGRLLHEHQ 350


>gi|309775307|ref|ZP_07670316.1| peptide chain release factor 1 [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308916970|gb|EFP62701.1| peptide chain release factor 1 [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 357

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 110/346 (31%), Positives = 176/346 (50%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
            +  V R   +N     P +  +      L RE+  L   +    E ++    L D   L
Sbjct: 8   LEGMVNRYHEINEMMMSPEIVTDSKMLAKLGREQADLTQVVETYTEYKNSVNALDDAKAL 67

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L    +E       E  +   +I+  +   +   +     DS++A +E+   AGG E   
Sbjct: 68  LMEEDKEIKEMAKMEIEELEPKIEEYLGKLEILLIPKDPNDSHNAIVEIRGAAGGDEGNI 127

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AE + +K E +E+ D E  G    + ++KG   YG LK E G HR+ R
Sbjct: 128 FAGDLYRMYSKFAESQGWKIEIVEMDDCEAGGFSLVSFMVKGDGVYGKLKFESGSHRVQR 187

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P   ++ + +I  +D  ++T RASGAGGQH+N TDSAVRI
Sbjct: 188 VPKTESQGRIHTSTATVLVTP-EIEAEDFDIDMNDLEVETMRASGAGGQHINKTDSAVRI 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
            H PTG+VV+CQ  RSQH+N+A A   +R+++YE   +K EE   +    +++IG G   
Sbjct: 247 VHKPTGIVVKCQDGRSQHENRATALMTIRSRVYEEHQRKLEEEQGV--ERRSKIGTGDRA 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R          +++G + D + A L+  +
Sbjct: 305 EKIRTYNY-PQNRVTDHRIGYTVNQLDRIMEGRMQDLLDALLSADQ 349


>gi|167041537|gb|ABZ06286.1| putative peptidyl-tRNA hydrolase domain protein [uncultured marine
           microorganism HF4000_008B14]
          Length = 360

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 106/352 (30%), Positives = 177/352 (50%), Gaps = 12/352 (3%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            +FD  D  + R + +      P +  +  + + L RER  L+  +      +    +  
Sbjct: 3   SIFDKLDPVLTRYNEIEEAMGRPEVATDFEQVQTLARERASLETLVDIAHRYRKLADEQG 62

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAG 126
            L  L  E  D  + +   D L   + +VE      +   L     D  D  +E+ +GAG
Sbjct: 63  DLNALLQEGGDAELTKMAKDELDETEKQVEQLAEELKIALLPKDPNDDRDVIVEIRSGAG 122

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A+ L R YTR+A+   ++ + ++ +  +  G+      I+G  A+  LK E+G
Sbjct: 123 GNEASLFASDLYRAYTRYAQLHHWQVDVMDSNPSDLGGLNKIVFGIQGKGAFSRLKYERG 182

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +++ V     D ++I+IS  D RID + A G GGQ+VN  
Sbjct: 183 VHRVQRVPDTEAQGRIHTSTATVAVLA-RADEVDIKISPDDLRIDIFHAGGHGGQNVNKV 241

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            +AVRI + PTG+ V CQ ERSQ+KNK +A  MLRAKLY+ E +K        E+ ++++
Sbjct: 242 ATAVRIVYEPTGLTVICQDERSQYKNKTKAMAMLRAKLYDAEQEKIAAER--SETRRSQV 299

Query: 307 G---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G      +IR+Y   P   + D R          ++DG+LDD + + +  ++
Sbjct: 300 GNADRSEKIRTYNY-PQDRITDHRVGASFHGIPRIMDGELDDLIDSLVTWEQ 350


>gi|257421856|ref|ZP_05598846.1| peptide chain release factor [Enterococcus faecalis X98]
 gi|257163680|gb|EEU93640.1| peptide chain release factor [Enterococcus faecalis X98]
 gi|315155439|gb|EFT99455.1| peptide chain release factor 1 [Enterococcus faecalis TX0043]
          Length = 357

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 107/347 (30%), Positives = 174/347 (50%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---DNLIL 72
             +   R   L     DP +  +      L +E  +    +   +  +  +    D   L
Sbjct: 5   LQSIEDRYEELGELLSDPAIISDTKRFMELSKEEANTRETVEVYRRYKQVVEGISDAEEL 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L   L+ +   + +E   +L++ K  +E + +   L     D  +  +E+   AGG E+ 
Sbjct: 65  LSENLDAEMAEMAKEELSDLKKEKEVLEDRIKILLLPKDPNDDKNIIMEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY ++AE + +K E LE +     G K   ++I G N +  LK E G HR+ 
Sbjct: 125 LFAGDLFNMYQKYAEAQGWKAEVLEANVTGIGGYKEVIMMISGDNVFSKLKYESGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EIE+++ D R+D Y ASGAGGQHVN T SAVR
Sbjct: 185 RVPSTESQGRIHTSTATVVVMP-EAEEVEIELADKDIRVDIYHASGAGGQHVNKTASAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q ERSQ KN+ +A  +LRA++Y+    ++E  +    + K+ +G G  
Sbjct: 244 LTHLPTGIVVAMQDERSQLKNREKAMKVLRARVYDQI--QQEAQSEYDANRKSAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIIDALVLYDQ 347


>gi|163756580|ref|ZP_02163692.1| peptide chain release factor 1 [Kordia algicida OT-1]
 gi|161323474|gb|EDP94811.1| peptide chain release factor 1 [Kordia algicida OT-1]
          Length = 357

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 95/342 (27%), Positives = 164/342 (47%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72
                QR   +N     P +  +      L +E + L   +      KE+ D + +   +
Sbjct: 5   LQIVKQRFDEVNDLIIQPDIIADQKRYVQLNKEYKDLKILVEKRDVYKELLDNISEAEEI 64

Query: 73  LELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +    + +   + +   D  +       E  +   +     DS +  +EV AG GG E+ 
Sbjct: 65  IADGSDAEMVEMAKIQMDEAKAALPALEEEIKVLLIPKDPEDSKNVVVEVRAGTGGDEAS 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYT++ E R +    ++  +G   G K     + G + YG +K E GVHR+ 
Sbjct: 125 IFAGDLHRMYTKYCEGRGWNVSVVDYSEGTSGGFKEIIFEVSGEDVYGTMKFEAGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P  ++     +  +D RI+   ++G GGQ VNTT SA+R
Sbjct: 185 RVPQTETQGRVHTSAATVMVLPEAEEFDVE-LDMNDVRIERTTSTGPGGQSVNTTYSAIR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           + H P+G+VV CQ ++S HKN  +A  +LR++LYE EL+K+  +A      K+ +  G +
Sbjct: 244 LHHGPSGLVVSCQDQKSSHKNLEKALKVLRSRLYEKELEKK--LAADSARRKSMVSSGDR 301

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              IR+Y   P   V D R  +     S++++GD+   +   
Sbjct: 302 SAKIRTYNY-PQGRVTDHRIGLTLYDLSNIMNGDIQKIIDEL 342


>gi|21230341|ref|NP_636258.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|188992877|ref|YP_001904887.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|24418637|sp|Q8PC68|RF1_XANCP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229576663|sp|B0RUA5|RF1_XANCB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|21111894|gb|AAM40182.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|167734637|emb|CAP52847.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           campestris]
          Length = 361

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 113/345 (32%), Positives = 175/345 (50%), Gaps = 8/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L     DP +  N  + + L RE   L+     ++E      D      +
Sbjct: 9   LEALAERREELQHLLSDPEVVSNNDKFRSLSRELSQLEPVALAMQEEARAKADLSAAEAM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E     Q    E++ +     +     D  + +LEV AG GG E+  +A
Sbjct: 69  RNDPEMRELAEEEILAAQARLDELDAQLALLLVPRDPRDEGNLFLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+AE++ +K E      GE  G K     + G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ + P  DD  EI I+ +D ++DT+R+SGAGGQHVN T+SA+RITH
Sbjct: 189 ATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDTFRSSGAGGQHVNKTESAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311
           +P+GVVV+CQ ERSQH N+ +A   L+A+L E E  K    A   ++ K ++G G    +
Sbjct: 249 VPSGVVVECQTERSQHANRDKAMKRLKAQLVEAERSK--AAAAEAQTRKLQVGSGDRSQR 306

Query: 312 IRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R   +      ++++GDLD  +   L   +
Sbjct: 307 IRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIARLLHEHQ 350


>gi|167586751|ref|ZP_02379139.1| peptide chain release factor 2 [Burkholderia ubonensis Bu]
          Length = 248

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 148/247 (59%), Positives = 196/247 (79%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S  AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +AT+ + G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+E++ +
Sbjct: 61  NATVKVSGEYAYGFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E++KR+   +  ESSKT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF
Sbjct: 181 AEMRKRQAEQDKLESSKTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTKAVLDGDLDDF 239

Query: 347 MKATLAI 353
           + A+L  
Sbjct: 240 ISASLKQ 246


>gi|332526537|ref|ZP_08402649.1| peptide chain release factor 1 [Rubrivivax benzoatilyticus JA2]
 gi|332110805|gb|EGJ10982.1| peptide chain release factor 1 [Rubrivivax benzoatilyticus JA2]
          Length = 351

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 110/333 (33%), Positives = 181/333 (54%), Gaps = 10/333 (3%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL+ L+    DP +  +V   + L RE+  + + +   +    R  D     E+ + E D
Sbjct: 2   RLAELDALLADPQVAADVKRLRTLSREQSEVADVVGRWRRYLQREQDLAAAREMLVAESD 61

Query: 82  CSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQDWANML 137
             +       +   + ++   + E           D+ +A++E+ AG GG ES  +A  L
Sbjct: 62  AEMAAMAEQEVVDAEADLARLEHELQLALIPRDPDDARNAFVEIRAGTGGDESALFAGDL 121

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY R+ E++ ++ E +   + E  G K   L + G + +G L+ E G HR+ R+   +
Sbjct: 122 ARMYLRYFERQGWRVEVMSASESELGGYKELVLKVDGTDVFGTLRFESGGHRVQRVPATE 181

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +  R HTS  ++ V P  D++ E++++ ++ RIDT+RASGAGGQHVN TDSA+RITH+PT
Sbjct: 182 AQGRIHTSACTVAVMPEPDEAEEVQLNPAELRIDTFRASGAGGQHVNKTDSAIRITHLPT 241

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314
           G+V +CQ +RSQH+NKA+A  +L A+L   E  + E  A    + K+ +G G    +IR+
Sbjct: 242 GIVAECQDDRSQHRNKAKAMAVLAARLR--EKDRAERAAKEAATRKSLVGSGDRSDRIRT 299

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           Y   P   + D R N+       ++DG+LDD +
Sbjct: 300 YNF-PQGRLTDHRINLTLYKLGQIMDGELDDVV 331


>gi|71083436|ref|YP_266155.1| peptide chain release factor 2 [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|71062549|gb|AAZ21552.1| bacterial peptide chain release factor 2 (RF-2) [Candidatus
           Pelagibacter ubique HTCC1062]
          Length = 284

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 172/280 (61%), Positives = 225/280 (80%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           + ELALEE + S++ E  ++++ +K   +  + +  LS E DS D Y+E+HAGAGGTESQ
Sbjct: 1   MNELALEEKNQSVINEVLESIKNLKKLAKKNETKCFLSNETDSLDCYIEIHAGAGGTESQ 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA ML RMY +W++ + FK+E +  H GEEAGIKS+T+ I+G   +GWLK E G+HRLV
Sbjct: 61  DWAEMLRRMYLKWSDIKNFKSELISEHKGEEAGIKSSTIKIEGDYVFGWLKAESGIHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+DS +RRHTSF+SIW+YPVVD++IEIEI+E D RIDTYR+SGAGGQHVNTTDSAVR
Sbjct: 121 RISPFDSGARRHTSFASIWIYPVVDENIEIEINEKDLRIDTYRSSGAGGQHVNTTDSAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+P+ +VVQCQ ERSQHKNK    NML+A+LY+ EL+K+E+ +   ESSK+EIGWG Q
Sbjct: 181 ITHLPSKIVVQCQNERSQHKNKDTCMNMLKARLYDFELKKKEQESQTVESSKSEIGWGHQ 240

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL PY+MVKD RTN E ++P  VLDG++DDF++++L
Sbjct: 241 IRSYVLHPYRMVKDNRTNFESSNPDKVLDGEIDDFLESSL 280


>gi|66769665|ref|YP_244427.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|81304380|sp|Q4URB6|RF1_XANC8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|66574997|gb|AAY50407.1| peptide chain release factor 1 [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 361

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 113/345 (32%), Positives = 175/345 (50%), Gaps = 8/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L     DP +  N  + + L RE   L+     ++E      D      +
Sbjct: 9   LEALAERREELQHLLSDPEVVSNNDKFRSLSRELSQLEPVALAMQEEARAKADLSAAEAM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E     Q    E++ +     +     D  + +LEV AG GG E+  +A
Sbjct: 69  RNDPEMRELAEEEILAAQARLDELDAQLALLLVPRDPRDEGNLFLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+AE++ +K E      GE  G K     + G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ + P  DD  EI I+ +D ++DT+R+SGAGGQHVN T+SA+RITH
Sbjct: 189 ATESQGRIHTSAATVAIIPEADDVEEIVINPADLKVDTFRSSGAGGQHVNKTESAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311
           +P+GVVV+CQ ERSQH N+ +A   L+A+L E E  K    A   ++ K ++G G    +
Sbjct: 249 VPSGVVVECQTERSQHANRDKAMKRLKAQLVEAERSK--AAAAKAQTRKLQVGSGDRSQR 306

Query: 312 IRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R   +      ++++GDLD  +   L   +
Sbjct: 307 IRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIARLLHEHQ 350


>gi|154174699|ref|YP_001407404.1| peptide chain release factor 1 [Campylobacter curvus 525.92]
 gi|166223540|sp|A7GW12|RF1_CAMC5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|112802322|gb|EAT99666.1| peptide chain release factor 1 [Campylobacter curvus 525.92]
          Length = 355

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 114/353 (32%), Positives = 175/353 (49%), Gaps = 15/353 (4%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           + L    D      R + ++    DP++  ++ +   L +E+  ++   +   +    L 
Sbjct: 4   DKLRPFLD------RYNEISALLGDPNIINDIEKMTKLSKEQSSIEPIKNAASQYLQTLD 57

Query: 68  DNLILLELALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
           D      L  + +      +E      R +      +   L     D  + +LE+ AG G
Sbjct: 58  DIEENKALLDDAELGELAREELKSAQIRKEELENEIKILLLPKDPNDDKNIFLEIRAGTG 117

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +   L   Y R+A+ R +K E +   +G   G K   LLIKG  AY  LK E G
Sbjct: 118 GDEAALFVGDLFNAYIRYADLRGYKFEIVSQSEGSAGGFKEIILLIKGKGAYSRLKFEGG 177

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS  ++ + P V+DS    I+ +D RID  R+SG GGQ VNTT
Sbjct: 178 THRVQRVPETESQGRVHTSAVTVAIMPEVEDSEIE-INPNDLRIDVMRSSGHGGQSVNTT 236

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPTG+VV  Q  +SQHKNK  A  +L+A+LY  E+Q+ E IA      K+++
Sbjct: 237 DSAVRITHIPTGLVVTNQDGKSQHKNKEAAMKVLKARLY--EMQEAERIAKETSERKSQV 294

Query: 307 GWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLAIKK 355
           G G    +IR+Y   P   + D R N+       ++ G L D+ ++  +A  +
Sbjct: 295 GTGDRSGRIRTYNF-PQNRISDHRINLTLYRLDAIMAGGLFDEIIEPLIAHHQ 346


>gi|189461883|ref|ZP_03010668.1| hypothetical protein BACCOP_02549 [Bacteroides coprocola DSM 17136]
 gi|189431477|gb|EDV00462.1| hypothetical protein BACCOP_02549 [Bacteroides coprocola DSM 17136]
          Length = 369

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 95/353 (26%), Positives = 160/353 (45%), Gaps = 18/353 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   ++T   DP++  +      L +E + L + +   KE    L        +
Sbjct: 11  LDGLVARFEEVSTLITDPNVISDQKRYVKLTKEYKELGDLMQARKEYLQCLNGLEEAKMM 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E D         +         + ++      + +   D  +A LE+  G GG E+  
Sbjct: 71  MAENDPEMKEMAREEAAACEARLPQLEEEIKLLLVPADPQDDRNAILEIRGGTGGDEAAI 130

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++ E + +K E    ++G   G K     + G   YG LK E GVHR+ R
Sbjct: 131 FAGDLFRMYSKYCESKGWKLEVSSANEGAAGGFKEIICSVTGDKVYGTLKYESGVHRVQR 190

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +S+ V P  +      I+E + + DT+R+ GAGGQ+VN  +S VR+
Sbjct: 191 VPATETQGRVHTSAASVAVLPEAEPFDVE-INEGEIKWDTFRSGGAGGQNVNKVESGVRL 249

Query: 253 THIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            +            ++++C + R Q KNK +A + LR  +Y+ E QK   I +I    KT
Sbjct: 250 RYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRKT 307

Query: 305 EIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +  G +   IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 308 MVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 359


>gi|254488030|ref|ZP_05101235.1| peptide chain release factor 1 [Roseobacter sp. GAI101]
 gi|214044899|gb|EEB85537.1| peptide chain release factor 1 [Roseobacter sp. GAI101]
          Length = 371

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 169/341 (49%), Gaps = 12/341 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                QR  FL           +  +   L +E   L   +  I+  +  L D      +
Sbjct: 27  LAQITQRFQFLEASMSAG---SDGADFAKLAKEYADLRPVVEQIEGYRQLLQDMDDARAM 83

Query: 76  ALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E        I       Q   L    AD+  A LE+  G GG E+  +A
Sbjct: 84  LKDPEMAELAEEELPRLKAEIPKAEASLQLALLPKDAADTKPAMLEIRPGTGGDEAALFA 143

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE + +K + +E    E  G+K     IKG N +  LK E GVHR+ R+ 
Sbjct: 144 ADLLRMYQRYAEAQGWKFDLIEEQLTELGGVKEVVAHIKGQNVFARLKYESGVHRVQRVP 203

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++I +  +D RIDT R+SGAGGQHVNTTDSAVRITH
Sbjct: 204 STESGGRIHTSAATVAVLP-EAEDVDIHVDPNDLRIDTMRSSGAGGQHVNTTDSAVRITH 262

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV    E+SQH+N+  A  +L+A+LY+ E Q+ +           ++G G    +
Sbjct: 263 IPTGIVVTSS-EKSQHRNREIAMQVLKARLYDAERQRVDSER--SADRAAQVGSGDRSER 319

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       +L GDLD+ + A  A
Sbjct: 320 IRTYNF-PQGRMTDHRINLTLYRLDAILQGDLDEIIDALTA 359


>gi|167563347|ref|ZP_02356263.1| peptide chain release factor 2 [Burkholderia oklahomensis EO147]
 gi|167570518|ref|ZP_02363392.1| peptide chain release factor 2 [Burkholderia oklahomensis C6786]
          Length = 248

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 149/247 (60%), Positives = 196/247 (79%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S  AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +AT+ + G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+E++ +
Sbjct: 61  NATIKVSGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            EL+KR+   +  ESSKT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF
Sbjct: 181 AELRKRQAEQDKLESSKTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTKAVLDGDLDDF 239

Query: 347 MKATLAI 353
           + A+L  
Sbjct: 240 IGASLKQ 246


>gi|296268873|ref|YP_003651505.1| peptide chain release factor 1 [Thermobispora bispora DSM 43833]
 gi|296091660|gb|ADG87612.1| peptide chain release factor 1 [Thermobispora bispora DSM 43833]
          Length = 350

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 121/343 (35%), Positives = 175/343 (51%), Gaps = 6/343 (1%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            + D  V+  + L  K  DP +  +  +A+   +    L   I+  +E+Q    D     
Sbjct: 1   MNLDELVKEYADLEQKLADPAVHADQAKARKYGKRYAELTPIITTYRELQSVREDLEAAR 60

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ELA E+   +      +       +   +    +     D  D  +E+ AG GG ES  +
Sbjct: 61  ELAREDPAFAEEAAELEAKIPELEDRLKRLL--IPKDPNDGKDIIMEIKAGEGGEESALF 118

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWLKGEQGVHRLVR 192
           A  LLRMY R+AE+  +K E +     E  G K  T+ IK    A+  LK E GVHR+ R
Sbjct: 119 AADLLRMYLRYAERLGYKAEIISAQPSELGGYKDVTISIKGKEGAWSRLKYEGGVHRVQR 178

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS + + VYP   + I+++I  +D RID +R+SG GGQ VNTTDSAVRI
Sbjct: 179 VPVTESQGRIHTSAAGVLVYP-EAEEIDVQIDPNDLRIDVFRSSGPGGQSVNTTDSAVRI 237

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311
           THIPTGVVV CQ E+SQ +NK  A  +LRA+L  L  Q+ E  A     S+   +    +
Sbjct: 238 THIPTGVVVSCQNEKSQLQNKEAAMRILRARLLALAQQEAEAAAAAERRSQVRTVDRSER 297

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IR+Y   P   + D R   +  +   VLDGDLD  ++A +  +
Sbjct: 298 IRTYNF-PENRISDHRVGYKAYNLDQVLDGDLDGVIQALIDAE 339


>gi|91786752|ref|YP_547704.1| peptide chain release factor 1 [Polaromonas sp. JS666]
 gi|119361575|sp|Q12F86|RF1_POLSJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91695977|gb|ABE42806.1| bacterial peptide chain release factor 1 (bRF-1) [Polaromonas sp.
           JS666]
          Length = 373

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 114/353 (32%), Positives = 174/353 (49%), Gaps = 17/353 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + RL  L++      +  ++   + L RE             +  R  D      +
Sbjct: 9   LDRQLLRLHELDSLLSATDVVSDLDRFRALTREHAEASVVAEQYTRLTSREADLASAEGM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130
             E  D   +   ++           +     Q   +     D+  A++E+ AG GG ES
Sbjct: 69  LAEAKDDPEMAAMAEEEIAAAKLDIAQLDEALQLMLIPKDPDDARAAFIEIRAGTGGDES 128

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA------YGWLKGE 184
             +A  L RMYTR+AE+ +++ E +     E  G K   L + GP        YG L+ E
Sbjct: 129 ALFAGDLFRMYTRFAERNRWQVEIISESPSELGGYKEVVLRMDGPTDATGVGVYGKLRFE 188

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G HR+ R+   ++  R HTS  ++ V P  D+++ I+I+ +D RIDTYRASGAGGQH+N
Sbjct: 189 SGGHRVQRVPATETQGRIHTSACTVAVLPEPDEAVAIQINPADLRIDTYRASGAGGQHIN 248

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            TDSAVRITHIPTG+V +CQ +RSQH+NKA+A  +L A++  +E  + E  A      K 
Sbjct: 249 KTDSAVRITHIPTGIVAECQDDRSQHRNKAKALQVLSARI--VEKDRSERAAKDAAMRKG 306

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +G G    +IR+Y   P   + D R N+       +++GDL D + A    +
Sbjct: 307 LVGSGDRSDRIRTYNF-PQGRLTDHRINLTLYKLLAIMEGDLGDVITALQVAR 358


>gi|163754877|ref|ZP_02161998.1| peptide chain release factor RF-2 [Kordia algicida OT-1]
 gi|161324944|gb|EDP96272.1| peptide chain release factor RF-2 [Kordia algicida OT-1]
          Length = 316

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 143/307 (46%), Positives = 210/307 (68%), Gaps = 2/307 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M++ +     +    E+ D + D  +L E   E D             + K+  E  +F 
Sbjct: 1   MKKLRGEKKWVGDYNEVADLIGDLEVLYEFYKEGDASEEEVTAQFEKTKTKI--EDLEFR 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LS E DS  A L+V AGAGGTES DWA+ML+RMY  +AEK+ +K + L   +G+ AGI
Sbjct: 59  NMLSDEGDSMSAVLQVTAGAGGTESCDWASMLMRMYLMFAEKQGYKVKELNYQEGDVAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ TL I+G  A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDD+IEI+I+ 
Sbjct: 119 KTVTLEIEGDYAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIDINP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D  I T R+SGAGGQ+VN  ++ V++TH P+G+ + C + RSQH N+ +A  ML+++LY
Sbjct: 179 ADIEITTARSSGAGGQNVNKVETKVQLTHKPSGIQISCSETRSQHDNRTRAMQMLKSQLY 238

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+K+ E  +  E+ K +I WG QIR+YV+ PY++VKD+RT  E  +   V++G +D+
Sbjct: 239 EIELKKQMEARDDIEAGKMKIEWGSQIRNYVMHPYKLVKDVRTAHETGNVDAVMNGYIDE 298

Query: 346 FMKATLA 352
           F+KA L 
Sbjct: 299 FLKAYLM 305


>gi|305664895|ref|YP_003861182.1| peptide chain release factor 1 [Maribacter sp. HTCC2170]
 gi|88707725|gb|EAQ99965.1| peptide chain release factor 1 [Maribacter sp. HTCC2170]
          Length = 358

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 101/346 (29%), Positives = 173/346 (50%), Gaps = 12/346 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCD 68
           + D  +   QR   ++     P +  +      L +E + L + +       E+ + + +
Sbjct: 1   MIDKLNIVKQRFDEVSDLIIQPDVISDQKRYVQLTKEYKDLKDLMEKRDAYVELTNNIQE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              ++    + +   + +   D  +       E  +   +     D+ D  +E+ AG GG
Sbjct: 61  AEEIISDGSDAEMLEMAKMQLDEAKTALPKLEEDIKLMLIPKDPEDAKDVVVEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYT++ E R +KT  +++ +G   G K     + G + YG LK E GV
Sbjct: 121 DEASIFAGDLFRMYTKYCEGRGWKTNVIDLSEGTSGGYKEIQFEVSGADVYGTLKFEAGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P  +D     I   D RID + +SG GGQ VNTT 
Sbjct: 181 HRVQRVPQTETQGRVHTSAATVMVLPEAEDFDVQ-IDPKDVRIDFFCSSGPGGQSVNTTY 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL +++E         +++ 
Sbjct: 240 SAVRLTHIPTGLVAQCQDQKSQHKNKDKAFRVLRSRLYDLELARKQEE--DAAKRNSQVS 297

Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            G +   IR+Y       V D R  +      ++++GD+   +   
Sbjct: 298 SGDRSAKIRTYNYA-QGRVTDHRIGLTLYDLQNIINGDIQKIIDEL 342


>gi|289163904|ref|YP_003454042.1| peptide chain release factor 1 [Legionella longbeachae NSW150]
 gi|288857077|emb|CBJ10892.1| peptide chain release factor 1 [Legionella longbeachae NSW150]
          Length = 362

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 113/343 (32%), Positives = 181/343 (52%), Gaps = 9/343 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNL 70
                 ++R   +     +  +  +  + K L +E   L+   +  +     +D +    
Sbjct: 7   LKLQQMLERYQEVGRLLSEASVIADQNQFKTLSKEYAQLEPIATCYETYIEAKDNVSSLE 66

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LL    +E      +E +   ++++   E  Q+  +     D  + YLE+ AG GG E+
Sbjct: 67  ELLAGEDKELAAMADEELASAKRQVEELDEQLQWHLIPKDPDDERNIYLEIRAGTGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+AE++ ++ E +    GE  G K     I G   Y  LK E G HR+
Sbjct: 127 AIFAGDLYRMYIRYAEEQGWQQELISASHGEHGGYKEIITRISGNAVYSQLKFESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ + P VD+  +I+I+  D RIDTYR+SGAGGQHVN TDSA+
Sbjct: 187 QRVPETESQGRVHTSACTVAILPEVDEIDDIQINPDDLRIDTYRSSGAGGQHVNKTDSAI 246

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTGVVV+CQ ERSQHKN+++A ++L+ +L + E  K+ +     ++ K+ +G G 
Sbjct: 247 RITHIPTGVVVECQDERSQHKNRSKAMSLLKTRLLDAEQSKQRKEQ--AQTRKSLVGTGD 304

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              +IR+Y   P   + D R N+     +DV++G L   ++  
Sbjct: 305 RSERIRTYNY-PQGRLTDHRINLTIYQLNDVMEGKLSLVVEPL 346


>gi|153207868|ref|ZP_01946445.1| peptide chain release factor 2 [Coxiella burnetii 'MSU Goat Q177']
 gi|165918820|ref|ZP_02218906.1| peptide chain release factor 2 [Coxiella burnetii RSA 334]
 gi|212219147|ref|YP_002305934.1| peptide chain release factor 2 [Coxiella burnetii CbuK_Q154]
 gi|120576294|gb|EAX32918.1| peptide chain release factor 2 [Coxiella burnetii 'MSU Goat Q177']
 gi|165917452|gb|EDR36056.1| peptide chain release factor 2 [Coxiella burnetii RSA 334]
 gi|212013409|gb|ACJ20789.1| bacterial peptide chain release factor 2 [Coxiella burnetii
           CbuK_Q154]
          Length = 289

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 159/282 (56%), Positives = 212/282 (75%), Gaps = 1/282 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           + +L+ +E +  ++ + + + ++++  +   +F+ + SGE DSN+AYL++ AG+GGTE+Q
Sbjct: 1   MAQLSKQEKETDLITDLNKDFKQLEKTIAEMEFQRMFSGEMDSNNAYLDIQAGSGGTEAQ 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA MLLRMY RW +K  F T  +E   GE AGIKSAT+   G  AYGWL+ E GVHRLV
Sbjct: 61  DWAEMLLRMYLRWGDKHGFTTTLMEASPGEVAGIKSATIEFTGSYAYGWLRSETGVHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS +RRHTSF+S++V P +DD IEIEI+ ++ RIDTYRASGAGGQHVN TDSAVR
Sbjct: 121 RKSPFDSGNRRHTSFASVFVSPEIDDDIEIEINPAELRIDTYRASGAGGQHVNRTDSAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+P+G+VVQCQ +RSQHKNKAQA   LRAKLYE+E+ K++E   + E+SK+EI WG Q
Sbjct: 181 ITHLPSGIVVQCQNDRSQHKNKAQAMKQLRAKLYEMEMMKQQEKQALLEASKSEISWGNQ 240

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IRSYVL     VKDLRT +E ++   VLDGD+D F++A L  
Sbjct: 241 IRSYVLD-ASRVKDLRTGVETSNTQAVLDGDIDLFIEACLKQ 281


>gi|319761653|ref|YP_004125590.1| peptide chain release factor 1 [Alicycliphilus denitrificans BC]
 gi|317116214|gb|ADU98702.1| peptide chain release factor 1 [Alicycliphilus denitrificans BC]
          Length = 360

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 116/343 (33%), Positives = 180/343 (52%), Gaps = 7/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QRLS L+       +  ++ + + + RE   +          + R  D     E+
Sbjct: 9   LERYAQRLSELDFLLSREDIMADMQQYRAISREHADVTAVAGRYARYRQREADLEGAREM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + QE     +    ++E + Q   L     D  +A++E+ AG GG ES  +A
Sbjct: 69  LEDPDMAEMAQEEIAAAEAELAQLEDELQRMLLPKDPDDERNAFVEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+A  + +K E +  ++ E  G K   L I+G +AYG L+ E G HR+ R+ 
Sbjct: 129 GDLARMYTRYAATQGWKVEVMSANESELGGYKEVVLRIEGDHAYGRLRFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D++  I ++ +D RIDT+RASGAGGQH+N TDSAVR+ H
Sbjct: 189 ATETQGRIHTSACTVAVMPEPDEAQAITLNPADLRIDTFRASGAGGQHINKTDSAVRVVH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+V +CQ  RSQH NKA+A  +L+A++ E E  +R   A      K  IG G    +
Sbjct: 249 LPTGIVAECQDGRSQHANKAKALQVLQARIQEKERSER--AAKEAALRKGLIGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IR+Y   P   + D R N+       V++GDL + ++A    +
Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYKLLAVMEGDLGEVLQALQHAR 348


>gi|218289204|ref|ZP_03493439.1| peptide chain release factor 1 [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218240552|gb|EED07732.1| peptide chain release factor 1 [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 356

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 110/351 (31%), Positives = 180/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   +  +R   L+     P +  +  + +   +E+  L   +   +E +    +   
Sbjct: 1   MFDRLASMEERYEHLSQLLCRPDVASDPEKLRSYAKEQAELAETVEVYREWKKVSQNIDE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
              +  ++ D  + +     L  ++   E  +       L     D  D ++E+ A AGG
Sbjct: 61  AKAMLQDKLDDEMREFVKAELAELQPRREGLEHRLKILLLPKDPNDDKDVFVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  LLRMY R+AEK  +KTE ++    +  G +   + + G  AY  LK E G 
Sbjct: 121 EEAALFAAELLRMYQRYAEKHGWKTEIIDASYTDMGGFREVVMAVHGKGAYAKLKFESGT 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++       + +E+EI E D RIDT+ ++G GGQ VNTT 
Sbjct: 181 HRVQRVPITESGGRIHTSTATVA-VLPEVEEVEVEIHEKDLRIDTFCSTGPGGQSVNTTQ 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VV CQ E+SQ KNK +A  +LRA+LYE   ++++E   +    + ++G
Sbjct: 240 SAVRITHLPTGIVVSCQDEKSQLKNKEKAMRVLRARLYEKAQREQQEE--LAAKRRLQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       VLDG+LD+ ++A +   +
Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTLHKLDAVLDGELDEIIQALIVESQ 347


>gi|81428746|ref|YP_395746.1| peptide chain release factor 1 [Lactobacillus sakei subsp. sakei
           23K]
 gi|119361554|sp|Q38WJ4|RF1_LACSS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78610388|emb|CAI55438.1| Peptide chain release factor 1 [Lactobacillus sakei subsp. sakei
           23K]
          Length = 365

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 108/352 (30%), Positives = 178/352 (50%), Gaps = 12/352 (3%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD-- 68
            +F+  D  + R + L     DP +         L +E   L   +     +++ L +  
Sbjct: 3   KMFEQLDGLLDRYAELQELMSDPEVINETSRYMELSKEEAGLREIVGKYTRLKEVLSEVT 62

Query: 69  -NLILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAG 126
            N  LL    + +   +++   + LQ  K +  +  +   L +   D  +  +E+   AG
Sbjct: 63  ENEELLRETTDSEMTELVKADLEELQTEKAQLEQEIKILMLPTDPNDEKNIIMEIRGAAG 122

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  LL MY R+AE + ++TE ++    E  G K   ++I G N Y  LK E G
Sbjct: 123 GDEASLFAGDLLNMYQRYAESQNWQTEIIDETATEVGGFKEVAMMITGKNVYSKLKYENG 182

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ RI   +S  R HTS +++ V P   D +++E+   D R+D YRASGAGGQH+N T
Sbjct: 183 AHRVQRIPKTESQGRVHTSTATVAVMP-EYDGVDVELEAKDIRVDVYRASGAGGQHINKT 241

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+THIPTG+VV  Q +RSQ +N+ +A  +L+A++Y+    + +       S K+ +
Sbjct: 242 SSAVRMTHIPTGIVVAMQDQRSQQQNRVKAMKILQARVYDYYESQNQSE--YDSSRKSAV 299

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       +++G+L D + A +   +
Sbjct: 300 GSGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELGDVIDALILFDQ 350


>gi|262401638|ref|ZP_06078204.1| peptide chain release factor 2 [Vibrio sp. RC586]
 gi|262352055|gb|EEZ01185.1| peptide chain release factor 2 [Vibrio sp. RC586]
          Length = 289

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 165/287 (57%), Positives = 213/287 (74%), Gaps = 1/287 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + D   LLELA+E +D     E    L+ ++ ++E  +F  + SG+ D++D YL++ AG+
Sbjct: 1   MEDVDGLLELAIEAEDQETFDEIGPELEELEAKLEQLEFRRMFSGDHDASDCYLDLQAGS 60

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+KSAT+ I G  AYGWL+ E 
Sbjct: 61  GGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLKSATVRIIGDYAYGWLRTET 120

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR SP+DS  RRHTSF+S ++YP VD++I+IEI+ +D RID YRASGAGGQHVNT
Sbjct: 121 GVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPADLRIDVYRASGAGGQHVNT 180

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+       E SK++
Sbjct: 181 TESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDSKSD 240

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IGWG QIRSYVL     +KDLRT IE  +   VLDGDLD F++A+L 
Sbjct: 241 IGWGSQIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDKFIEASLK 286


>gi|166710803|ref|ZP_02242010.1| peptide chain release factor 1 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 361

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 109/345 (31%), Positives = 171/345 (49%), Gaps = 8/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L     DP +  N  + + L RE   L+     +++      D      +
Sbjct: 9   LEALAERREELQHLLSDPDVVNNNDKFRTLSRELSQLEPVAVALEDEARAKADLSAAEAM 68

Query: 76  ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E     Q   +          +     D  + +LEV AG GG E+  +A
Sbjct: 69  RTDPEMRELAEEEIAAAQARLEELDTQLASLLVPRDPRDDGNLFLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+AE++ +K E      GE  G K     + G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ +    DD  EI I+ +D ++DT+R+SGAGGQHVN T+SA+RITH
Sbjct: 189 ATESQGRIHTSAATVAIIAEADDVEEIVINPADLKVDTFRSSGAGGQHVNKTESAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311
           +P+GVVV+CQ ERSQH N+ +A   L+A+L + E  K    A   ++ K ++G G    +
Sbjct: 249 VPSGVVVECQTERSQHANRDKAMKRLKAQLLDTERSK--AAAAQAQTRKLQVGSGDRSQR 306

Query: 312 IRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R   +      ++++GDLD  +   L   +
Sbjct: 307 IRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIARLLHEHQ 350


>gi|15616337|ref|NP_244642.1| peptide chain release factor 1 [Bacillus halodurans C-125]
 gi|20139353|sp|Q9K6F4|RF1_BACHD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|10176399|dbj|BAB07494.1| peptide chain release factor 1 in translation [Bacillus halodurans
           C-125]
          Length = 356

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 112/351 (31%), Positives = 187/351 (53%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCD 68
           +F+   +  +R   LN    DP +  +  + +   +E+  ++  +   +E +   D+  D
Sbjct: 1   MFERLQSLDERYERLNELLSDPEVISDSNKLREYSKEQADMEETVQVYREYKTVMDQYQD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +LE  L+++  ++++E  D L   K +     +   L     D  +  +EV   AGG
Sbjct: 61  AKEMLEDKLDDEMYAMVKEEIDELATRKEDLEAKLKVLLLPKDPNDDKNVIVEVRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+Q +A  L +MY R+AE + +K E +E    E  G K     + G  AY  LK E G 
Sbjct: 121 DEAQLFAADLYKMYARYAEAQGWKIEVIEASSTELGGYKEIIFSVNGKGAYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +E++I E D R+DT+ +SG GGQ VNTT 
Sbjct: 181 HRVQRVPQTESGGRIHTSTATVAVLP-EAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTM 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+VV CQ E+SQ KNK +A  +LRA++Y+    ++E  A   ++ K+ +G
Sbjct: 240 SAVRLTHLPTGIVVSCQDEKSQIKNKEKAMKVLRARIYDKF--QQEAQAEYDQTRKSAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L G LD+ +++ +  ++
Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTLQKLEQILQGKLDEIIESLIVHEQ 347


>gi|87309088|ref|ZP_01091225.1| peptide chain release factor 2 (RF-2) [Blastopirellula marina DSM
           3645]
 gi|87288079|gb|EAQ79976.1| peptide chain release factor 2 (RF-2) [Blastopirellula marina DSM
           3645]
          Length = 332

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 146/325 (44%), Positives = 211/325 (64%), Gaps = 2/325 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W N   A+ ++ + + L + +  ++     + D   +LE+A E+D         
Sbjct: 1   MVAPDFWDNQEIAQTVVGQLKSLKSILEPLEACAAAVGDLDAMLEMAEEDDSFDAE--AK 58

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             + R++ E++  + ++LL+G+ D+  A + +HA  GGT++ DWA MLLRMY+ WA +  
Sbjct: 59  AEVARLEAELDQLELKALLNGQHDACGALVSIHARDGGTDANDWAEMLLRMYSHWAAEHD 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  E ++  D EEAGI SAT  ++G  AYG+LKGE G+HRLVRISP++S  +R TSF+++
Sbjct: 119 YTVELIDRADNEEAGINSATFAVRGVMAYGYLKGESGMHRLVRISPFNSEGKRQTSFAAV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P + DS E+EI E D RIDTYRASGAGGQHVN TDSA+R+TH+PTGVVVQCQ ERSQ
Sbjct: 179 DVSPEIPDSEEVEIDEEDVRIDTYRASGAGGQHVNKTDSAIRLTHLPTGVVVQCQNERSQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           HKN+AQAW MLR+++  +E ++RE        ++ ++G+G QIR+Y L P Q VKD RT 
Sbjct: 239 HKNRAQAWKMLRSRIARIEEERREAEEAARYKTQAKVGFGSQIRNYFLHPDQRVKDARTG 298

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
               S   V+DGD+  F+ A L  +
Sbjct: 299 HYVGSFHAVMDGDIQGFLDAYLRWR 323


>gi|294634840|ref|ZP_06713362.1| peptide chain release factor 2 [Edwardsiella tarda ATCC 23685]
 gi|291091713|gb|EFE24274.1| peptide chain release factor 2 [Edwardsiella tarda ATCC 23685]
          Length = 293

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 169/292 (57%), Positives = 213/292 (72%), Gaps = 1/292 (0%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +   L D   LLELA+E DD     E    L ++++++   +F  + SGE DS D YL++
Sbjct: 1   MHQGLEDVSGLLELAVEADDEETFDEAVAELDQLEVKLGQLEFRRMFSGEYDSADCYLDI 60

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  +GE AG+KSAT+ I G  AYGWL
Sbjct: 61  QAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESEGEVAGLKSATIKISGDYAYGWL 120

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQ
Sbjct: 121 RTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQ 180

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E 
Sbjct: 181 HVNKTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEVQKKNAERQQMEE 240

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++IGWG QIRSYVL     +KDLRT++E  +   VLDGDLD F++A+L  
Sbjct: 241 NKSDIGWGSQIRSYVLDD-SRIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 291


>gi|69249626|ref|ZP_00605024.1| Peptide chain release factor 1 [Enterococcus faecium DO]
 gi|257880056|ref|ZP_05659709.1| peptide chain release factor 1 [Enterococcus faecium 1,230,933]
 gi|257882292|ref|ZP_05661945.1| peptide chain release factor 1 [Enterococcus faecium 1,231,502]
 gi|257885488|ref|ZP_05665141.1| peptide chain release factor 1 [Enterococcus faecium 1,231,501]
 gi|257891147|ref|ZP_05670800.1| peptide chain release factor 1 [Enterococcus faecium 1,231,410]
 gi|257893961|ref|ZP_05673614.1| peptide chain release factor 1 [Enterococcus faecium 1,231,408]
 gi|258614612|ref|ZP_05712382.1| peptide chain release factor 1 [Enterococcus faecium DO]
 gi|260560331|ref|ZP_05832507.1| peptide chain release factor 1 [Enterococcus faecium C68]
 gi|261208268|ref|ZP_05922941.1| peptide chain release factor 1 [Enterococcus faecium TC 6]
 gi|289565643|ref|ZP_06446089.1| peptide chain release factor 1 [Enterococcus faecium D344SRF]
 gi|293553327|ref|ZP_06673963.1| peptide chain release factor 1 [Enterococcus faecium E1039]
 gi|293563060|ref|ZP_06677526.1| peptide chain release factor 1 [Enterococcus faecium E1162]
 gi|293567649|ref|ZP_06678992.1| peptide chain release factor 1 [Enterococcus faecium E1071]
 gi|294615325|ref|ZP_06695200.1| peptide chain release factor 1 [Enterococcus faecium E1636]
 gi|294617194|ref|ZP_06696846.1| peptide chain release factor 1 [Enterococcus faecium E1679]
 gi|294623635|ref|ZP_06702473.1| peptide chain release factor 1 [Enterococcus faecium U0317]
 gi|314937739|ref|ZP_07845061.1| peptide chain release factor 1 [Enterococcus faecium TX0133a04]
 gi|314942363|ref|ZP_07849210.1| peptide chain release factor 1 [Enterococcus faecium TX0133C]
 gi|314947687|ref|ZP_07851096.1| peptide chain release factor 1 [Enterococcus faecium TX0082]
 gi|314952118|ref|ZP_07855137.1| peptide chain release factor 1 [Enterococcus faecium TX0133A]
 gi|314992371|ref|ZP_07857803.1| peptide chain release factor 1 [Enterococcus faecium TX0133B]
 gi|314997442|ref|ZP_07862389.1| peptide chain release factor 1 [Enterococcus faecium TX0133a01]
 gi|68194105|gb|EAN08645.1| Peptide chain release factor 1 [Enterococcus faecium DO]
 gi|257814284|gb|EEV43042.1| peptide chain release factor 1 [Enterococcus faecium 1,230,933]
 gi|257817950|gb|EEV45278.1| peptide chain release factor 1 [Enterococcus faecium 1,231,502]
 gi|257821344|gb|EEV48474.1| peptide chain release factor 1 [Enterococcus faecium 1,231,501]
 gi|257827507|gb|EEV54133.1| peptide chain release factor 1 [Enterococcus faecium 1,231,410]
 gi|257830340|gb|EEV56947.1| peptide chain release factor 1 [Enterococcus faecium 1,231,408]
 gi|260073676|gb|EEW62002.1| peptide chain release factor 1 [Enterococcus faecium C68]
 gi|260077525|gb|EEW65243.1| peptide chain release factor 1 [Enterococcus faecium TC 6]
 gi|289162611|gb|EFD10465.1| peptide chain release factor 1 [Enterococcus faecium D344SRF]
 gi|291589584|gb|EFF21389.1| peptide chain release factor 1 [Enterococcus faecium E1071]
 gi|291591828|gb|EFF23462.1| peptide chain release factor 1 [Enterococcus faecium E1636]
 gi|291596539|gb|EFF27780.1| peptide chain release factor 1 [Enterococcus faecium E1679]
 gi|291596961|gb|EFF28174.1| peptide chain release factor 1 [Enterococcus faecium U0317]
 gi|291602551|gb|EFF32767.1| peptide chain release factor 1 [Enterococcus faecium E1039]
 gi|291604974|gb|EFF34442.1| peptide chain release factor 1 [Enterococcus faecium E1162]
 gi|313588451|gb|EFR67296.1| peptide chain release factor 1 [Enterococcus faecium TX0133a01]
 gi|313593096|gb|EFR71941.1| peptide chain release factor 1 [Enterococcus faecium TX0133B]
 gi|313595737|gb|EFR74582.1| peptide chain release factor 1 [Enterococcus faecium TX0133A]
 gi|313598876|gb|EFR77721.1| peptide chain release factor 1 [Enterococcus faecium TX0133C]
 gi|313642877|gb|EFS07457.1| peptide chain release factor 1 [Enterococcus faecium TX0133a04]
 gi|313645928|gb|EFS10508.1| peptide chain release factor 1 [Enterococcus faecium TX0082]
          Length = 357

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 107/347 (30%), Positives = 171/347 (49%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---DNLIL 72
                 R   L     DP +  +      L +E  +    +   +  ++ +    D   L
Sbjct: 5   LQAIEDRYEELGELLSDPEVISDTKRFMQLSKEEANTRETVEVYRRYKEVVQGITDTEEL 64

Query: 73  LELALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L   L+++      +E S+  +  ++  E  +   L     D  +  +E+   AGG E+ 
Sbjct: 65  LGEKLDDEMAELAKEELSELKKEKEVLEEKIKILLLPKDPNDDKNIIMEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY ++AE + +KTE +E +     G K   ++I G N Y  LK E G HR+ 
Sbjct: 125 LFAGDLFNMYQKYAEAQGWKTEVMEANVTGIGGYKEVIMMITGDNVYSKLKYESGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EI+I + D R D Y ASGAGGQHVN T SAVR
Sbjct: 185 RVPSTESQGRIHTSTATVVVMP-EAEEVEIDIEDKDIRTDIYHASGAGGQHVNKTASAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q ERSQ KN+ +A  +LRA++Y+    ++E  +    + K+ +G G  
Sbjct: 244 LTHLPTGIVVAMQDERSQIKNREKAMKILRARVYDKI--QQEAQSEYDANRKSAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIVDALIMYDQ 347


>gi|304407781|ref|ZP_07389432.1| peptide chain release factor 1 [Paenibacillus curdlanolyticus YK9]
 gi|304343264|gb|EFM09107.1| peptide chain release factor 1 [Paenibacillus curdlanolyticus YK9]
          Length = 358

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 105/351 (29%), Positives = 184/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           + D       R   L+    DP +  +    +   +E+  L  A     E +    +L D
Sbjct: 1   MLDRLSVLADRYEKLSELLCDPDVAGDPKRLREYSKEQSSLQEAYEAFTEYKQVCEQLDD 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGG 127
             ++L   L+++   +++     L   K  ++ + +   L     D  +  +E+   AGG
Sbjct: 61  AKLMLGEKLDDEMREMVKMEIGELDERKTALDERIRILLLPKDPNDDKNVIVEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY ++A+ + ++ E +++++ +  G K    +I G  AY  LK E G 
Sbjct: 121 DEAALFAYDLYRMYNKYADSQGWRVELMDMNESDLGGFKEVVFMIIGKGAYSKLKFESGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS S++ V P   + ++IEI + D RIDT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRIPATESGGRIHTSTSTVAVMP-EIEEVDIEIHDKDIRIDTFCSSGAGGQSVNTTK 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+ H+PTG++  CQ  +SQ++NKA+A  +LRA++Y  E+ ++EE A      K+++G
Sbjct: 240 SAVRVLHVPTGIMATCQDGKSQNENKAKALQVLRARIY--EIHRQEEEAKYAGERKSKVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +++GD+++ ++     ++
Sbjct: 298 TGDRSERIRTYNY-PQSRVTDHRIGLTLHRLDAIMNGDIEEIVQTLTITEQ 347


>gi|56697312|ref|YP_167678.1| peptide chain release factor 1 [Ruegeria pomeroyi DSS-3]
 gi|81558450|sp|Q5LQM7|RF1_SILPO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56679049|gb|AAV95715.1| peptide chain release factor 1 [Ruegeria pomeroyi DSS-3]
          Length = 351

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 119/341 (34%), Positives = 173/341 (50%), Gaps = 12/341 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   QR  +L     D     ++     L +E   L   +  I   +    D      +
Sbjct: 7   LDQITQRFQYLEAAMADGASGSDIA---ALAKEYSDLRPVVEQIAAWRQLCADMDEARAM 63

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  ++ +E    L+       +  Q   L    AD+  A LE+  G GG E+  +A
Sbjct: 64  LSDPDMKALAEEELPLLKARLPEAEQALQLALLPKDAADARPAMLEIRPGTGGDEAALFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE R +K E +E+ + E  GIK     I G N +  LK E GVHR+ R+ 
Sbjct: 124 GDLLRMYQRYAEARGWKLELIELQETELGGIKEVVARISGENVFARLKYESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P     ++I+I   D RIDT R+SGAGGQHVNTTDSAVRITH
Sbjct: 184 ETESGGRIHTSAATVAVLP-EAQDVDIQIDPGDIRIDTMRSSGAGGQHVNTTDSAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +P+G+VV    E+SQH+N+  A  +L+ +LY+LE Q+ +       S   ++G G    +
Sbjct: 243 LPSGIVVTSS-EKSQHRNREIAMQVLKTRLYDLERQRLDRER--SASRSAQVGTGDRSER 299

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       V+ GDLD+ + A  A
Sbjct: 300 IRTYNF-PQGRMTDHRINLTLYKLDAVMQGDLDEVIDALAA 339


>gi|171462958|ref|YP_001797071.1| peptide chain release factor 1 [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|238692839|sp|B1XSY0|RF1_POLNS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|171192496|gb|ACB43457.1| peptide chain release factor 1 [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 359

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 109/344 (31%), Positives = 177/344 (51%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+   RL+ LN+        +++   + L RE   +   +      +    D     E+
Sbjct: 9   LDHLDTRLAELNSLLTSEEATKDMDAYRKLTREHSDIATVVEQFYLYKQAEADAQAAEEM 68

Query: 76  ALEEDDCSILQETSDNL-QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +      E        ++      Q   L   E D  + +LE+ AG GG E   +A
Sbjct: 69  RKDPEMKEFADEEQKQALATMEALESTLQKLLLPKDENDERNVFLEIRAGTGGDEGALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE++ +K E +   + +  G K   L + G   Y  LK E G HR+ R+ 
Sbjct: 129 GDLLRMYTRFAERQGWKVEVVSAAESDLGGYKEVVLRLVGQAVYSRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+   ++I+ ++ RIDT+RASGAGGQH+N TDSA+RITH
Sbjct: 189 QTETQGRIHTSACTVAVMPETDELEAVKINPAELRIDTFRASGAGGQHINKTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG VV+CQ +RSQH+N+ QA  +L +++ +   ++RE+     ++ K+ +G G    +
Sbjct: 249 LPTGTVVECQDDRSQHRNREQAMKVLVSRIMDA--REREKHQLEAQTRKSLVGTGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++DGD+DD   A  +  +
Sbjct: 307 IRTYNF-PQGRITDHRINLTLYKIDAMMDGDIDDLCNALASEHQ 349


>gi|134296298|ref|YP_001120033.1| peptide chain release factor 2 [Burkholderia vietnamiensis G4]
 gi|134139455|gb|ABO55198.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia
           vietnamiensis G4]
          Length = 248

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 148/247 (59%), Positives = 196/247 (79%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S  AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +AT+ + G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+E++ +
Sbjct: 61  NATIKVSGEYAYGFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E++KR+   +  ESSKT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF
Sbjct: 181 AEMRKRQAEQDKLESSKTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTKAVLDGDLDDF 239

Query: 347 MKATLAI 353
           + A+L  
Sbjct: 240 ISASLKQ 246


>gi|300716406|ref|YP_003741209.1| peptide chain release factor 1 (RF-1) [Erwinia billingiae Eb661]
 gi|299062242|emb|CAX59359.1| Peptide chain release factor 1 (RF-1) [Erwinia billingiae Eb661]
          Length = 360

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 112/337 (33%), Positives = 172/337 (51%), Gaps = 7/337 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     +  Q    D     E+
Sbjct: 9   LEALQERHEEVEAMLGDAGVIADQDRFRALSREYAQLTDVSQCFRRWQQNQDDIAAAEEM 68

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   +  +E  D     +   +  Q   L     D  + YLEV AG GG E+  +A
Sbjct: 69  LDDPEMRDMAQEELKDARATSEQLEQELQVLLLPKDPDDERNCYLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R++K E +  +DGE  G K     + G  AYG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAETRRWKIEIMSTNDGEHGGYKEVIAKVIGDGAYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P + ++   EI+  D +IDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAIMPELPEAEMPEINAGDLKIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A ++L A++   E  +  +      + +  +G G    +
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIRAAETARLHQE--EASTRRNLLGTGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            R+Y   P   + D R N+      + + G LD  ++
Sbjct: 307 NRTYNY-PQGRITDHRINLTLYRLDEAMQGKLDMLIE 342


>gi|46446286|ref|YP_007651.1| peptide chain release factor 1 [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|61214629|sp|Q6MDH3|RF1_PARUW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|46399927|emb|CAF23376.1| probable translation releasing factor RF-1 [Candidatus
           Protochlamydia amoebophila UWE25]
          Length = 359

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 115/343 (33%), Positives = 197/343 (57%), Gaps = 10/343 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE---IQDRLCDNLILLE 74
             ++RL+ +     +PH++ +  + + L +E  +L+N      E   ++ +L DN  LL+
Sbjct: 8   ELLERLAEVEEVLGNPHVYDDQKKYRALTQEHAYLNNLKKSWDEKKDLEKQLEDNQELLK 67

Query: 75  LALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           +  + +   +L++       R++      +   +     D+  + +E+ AG GG E+  +
Sbjct: 68  IEKDLEFAEVLKDDIRQLQSRVQELQLLIENLLVPPDPLDNRPSIIELRAGTGGDEAALF 127

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
               +RMY  +A+++ ++ E L     E  G K   +++ G N Y +++ E G HR+ R+
Sbjct: 128 VGDCVRMYKLFADRKGWRYELLSCTPSEMGGFKEYVMVLSGENVYRFMQYEAGTHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS  +I V P  D++ EI++ E D RIDTYR+SGAGGQHVNTTDSAVRIT
Sbjct: 188 PATEAQGRVHTSAITIAVLPEPDENEEIDLDEKDLRIDTYRSSGAGGQHVNTTDSAVRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+P+G+VV CQ+ERSQHKNK +A  +L+AK+ E+E QK+++   +  +   ++G G    
Sbjct: 248 HVPSGIVVYCQEERSQHKNKDKAMRLLKAKMAEIEQQKKQQE--LASTRAQQVGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +IR+Y   P   + D R N+ K +   V++GDL++   A +A 
Sbjct: 306 RIRTYNF-PQNRITDHRINLTKYNLDYVINGDLEEITSALVAY 347


>gi|307304754|ref|ZP_07584504.1| peptide chain release factor 1 [Shewanella baltica BA175]
 gi|306912156|gb|EFN42580.1| peptide chain release factor 1 [Shewanella baltica BA175]
          Length = 363

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 110/338 (32%), Positives = 178/338 (52%), Gaps = 9/338 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R   +     D  +  +    + L +E   L++ ++  K  Q    D     E+
Sbjct: 9   LEGLLERNEEVMALLGDASVILDQDRFRALSKEYAQLEDVVAGFKAYQQAQVDLDSAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D         +               Q   L     D  +A++E+ AGAGG E+  
Sbjct: 69  LEEDDAEMREMAQEEMKAAKAKLEHLEDELQILLLPKDPDDDKNAFVEIRAGAGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE  +++ E +  ++GE  G K   + + G   YG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAEANRWQIEIMSCNEGEHGGFKEVIMKVSGDGVYGKLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   V ++  I I+ +D ++DT+R+SGAGGQHVN TDSA+RI
Sbjct: 189 VPETESQGRVHTSAVTVVVLHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV+CQ +RSQHKN+AQA ++L A++  LE +KR        + ++ +  G   
Sbjct: 249 THIPTGIVVECQDQRSQHKNRAQAMSVLAARIQALEDEKRRSAEE--STRRSLVASGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            ++R+Y   P   V + R N+     ++V++GDLD  +
Sbjct: 307 ERVRTYNF-PQGRVSEHRINLTLYRLNEVMEGDLDAIL 343


>gi|308804958|ref|XP_003079791.1| putative translation releasing factor2 (ISS) [Ostreococcus tauri]
 gi|116058248|emb|CAL53437.1| putative translation releasing factor2 (ISS) [Ostreococcus tauri]
          Length = 419

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 122/344 (35%), Positives = 196/344 (56%), Gaps = 4/344 (1%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D      R   L+ ++    LW++  +A+++M E   +   +   +  ++ + D    LE
Sbjct: 69  DVKGLKMRFESLDERSSAGDLWEDANKARVVMAELAGVREELDAARAFEEHVSDAKTALE 128

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGTES 130
           LA   +  + + E           ++      +   LL G+ D+  A ++++AGAGG ++
Sbjct: 129 LAEVGESDNEMSEMLCEAMASVEALDEALEQWELRRLLGGKYDALGAVVQIYAGAGGLDA 188

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDW  ML RMY  W EKR +     E  +GE  G+K+ATL + G +AYG+L  E+G HRL
Sbjct: 189 QDWTEMLERMYIGWCEKRGYGVRVTERQEGEGGGLKTATLEVDGRHAYGYLSSEKGTHRL 248

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           VR SP++ ++ R TSF+++ V P++ D  E+++ E D  I T R+SGAGGQ+VN  ++AV
Sbjct: 249 VRQSPFNKDAARQTSFAAVDVIPLLQDEDEVKVPEGDLEITTMRSSGAGGQNVNKLETAV 308

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RI H+PTG+ V+ ++ R+Q  N+  A   ++AKL  L  + R            +  WG+
Sbjct: 309 RIKHVPTGISVKAEEHRTQALNRQAAMLRIKAKLTALAEEARVADIAELRGDIVKAEWGQ 368

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           QIR+YVL PY+MVKD+RT +E +  + VL+G LD++M   L  K
Sbjct: 369 QIRNYVLHPYKMVKDVRTGVETSDVTRVLNGGLDEYMNGYLRWK 412


>gi|225175296|ref|ZP_03729291.1| peptide chain release factor 2 [Dethiobacter alkaliphilus AHT 1]
 gi|225169048|gb|EEG77847.1| peptide chain release factor 2 [Dethiobacter alkaliphilus AHT 1]
          Length = 288

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 154/258 (59%), Positives = 195/258 (75%), Gaps = 1/258 (0%)

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
            E++  +   L  G  D+N+A + +H GAGGTESQDWANMLLRMYTRWAE+R ++ E L+
Sbjct: 25  AEMDKLELAVLFRGRYDANNAIIAIHPGAGGTESQDWANMLLRMYTRWAERRNYQVEVLD 84

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
           +  G+EAGIKSATLLIKG NAYG+LK E+GVHRLVRISP+D+ SRRHTSF+S+ V P V+
Sbjct: 85  LLPGDEAGIKSATLLIKGRNAYGFLKAERGVHRLVRISPFDAASRRHTSFASLDVLPEVE 144

Query: 217 DSIE-IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           +    IEIS  D +IDTYRASGAGGQHVNTTDSAVRITHIPTG VVQCQ ERSQH N+ +
Sbjct: 145 EGDSGIEISPDDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGTVVQCQNERSQHSNRDR 204

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A  +L+A+L +L  +++ E  +     + EI WG QIRSYV QPY MVKD RT +E  + 
Sbjct: 205 AMKILKARLADLYQRQQAEELSNLRGEQKEIAWGSQIRSYVFQPYTMVKDHRTGVEVGNI 264

Query: 336 SDVLDGDLDDFMKATLAI 353
           + V+DGDLD+ +++ L  
Sbjct: 265 NAVMDGDLDELIESYLRQ 282


>gi|103488191|ref|YP_617752.1| peptide chain release factor 1 [Sphingopyxis alaskensis RB2256]
 gi|119361612|sp|Q1GPK3|RF1_SPHAL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|98978268|gb|ABF54419.1| bacterial peptide chain release factor 1 (bRF-1) [Sphingopyxis
           alaskensis RB2256]
          Length = 355

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 186/344 (54%), Gaps = 10/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  ++R + L  +     +     +     +E   L+   +  +E+     + + L E+
Sbjct: 9   IDAIIERHAALQARMATGDMA--PADFVAASKEFAELEPVATAAREVVRLREELVALNEM 66

Query: 76  ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +  ++  E    ++            + L    ADS  A LE+ AG GG E+  +A
Sbjct: 67  LADPEMKAMAVEEIAAVEAALPAAEHDLALQLLPKDVADSRAAMLEIRAGTGGDEAALFA 126

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY+R+A+ + +K E +  ++ E  G K     + G   +  LK E GVHR+ R+ 
Sbjct: 127 GDLLRMYSRYADTQGWKVEIISANEAEVGGYKEVVASVSGQGVFAKLKFESGVHRVQRVP 186

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + +++ I++SD +ID YRASGAGGQHVNTTDSA+RITH
Sbjct: 187 VTESGGRIHTSAATVAVLP-EAEEVDVAINDSDLKIDIYRASGAGGQHVNTTDSAIRITH 245

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV  Q +RSQHKN+A+A  +LRA+LY+LE +K    +    + K+ +G G    +
Sbjct: 246 IPTGLVVIQQDQRSQHKNRAKAMQVLRARLYDLEREKL--HSAEASARKSMVGSGDRSER 303

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      ++L+G +D+ + A +A  +
Sbjct: 304 IRTYNF-PQGRVTDHRINLTLHRLPEILEGAMDELIDALIAEDQ 346


>gi|224026398|ref|ZP_03644764.1| hypothetical protein BACCOPRO_03154 [Bacteroides coprophilus DSM
           18228]
 gi|224019634|gb|EEF77632.1| hypothetical protein BACCOPRO_03154 [Bacteroides coprophilus DSM
           18228]
          Length = 369

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 94/353 (26%), Positives = 161/353 (45%), Gaps = 18/353 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   ++T   DP++  +      L +E + L + ++  KE    L        +
Sbjct: 11  LEGLVARFEEVSTLITDPNVIGDQKRYVKLTKEYKELGDIMAARKEYLQCLNGLEEAKMM 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E D         +         + ++      + +   D  +A LE+  G GG E+  
Sbjct: 71  MAENDPEMKEMAREEAAACEARIPQLEEEIKLLLVPADPQDDRNAILEIRGGTGGDEAAI 130

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++ E + +K E    ++G   G K     + G   YG LK E GVHR+ R
Sbjct: 131 FAGDLFRMYSKYCESKGWKLEVSNANEGAAGGFKEIICSVTGDKVYGTLKYESGVHRVQR 190

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +S+ V P  +      I+E + + DT+R+ GAGGQ+VN  +S VR+
Sbjct: 191 VPATETQGRVHTSAASVAVLPEAEPFDVE-INEGEIKWDTFRSGGAGGQNVNKVESGVRL 249

Query: 253 THIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            +            ++++C + R Q KNK +A + LR  +Y+ E QK   I +I    KT
Sbjct: 250 RYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRKT 307

Query: 305 EIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +  G +   IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 308 MVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 359


>gi|270291033|ref|ZP_06197256.1| peptide chain release factor 1 [Pediococcus acidilactici 7_4]
 gi|304385309|ref|ZP_07367654.1| peptide chain release factor RF1 [Pediococcus acidilactici DSM
           20284]
 gi|270280429|gb|EFA26264.1| peptide chain release factor 1 [Pediococcus acidilactici 7_4]
 gi|304328516|gb|EFL95737.1| peptide chain release factor RF1 [Pediococcus acidilactici DSM
           20284]
          Length = 359

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 104/351 (29%), Positives = 171/351 (48%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D       R   L+    DP +  +    + L +E   +   +   +E +  +     
Sbjct: 3   IMDKVQAVADRYDELSELLADPEVLADSQRYQELSKEEGEIRETVEKYREYRKVVDSIAE 62

Query: 72  LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             EL  E+ D  +             + +   E  +   L     D  +  +E+H  AGG
Sbjct: 63  NEELQREKLDPEMDSLVKAELADLRDQKEKLEEEIKVLMLPKDPNDDKNIIMEIHGAAGG 122

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L  MYTR+AE + +K + ++ +  +  G K   L+I G   Y  LK E G 
Sbjct: 123 DEASLFAADLYNMYTRYAESQGWKVQIVDENATDVGGFKEIVLMISGDKVYSKLKYENGA 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + ++IEI   D R D YR+SGAGGQH+N T 
Sbjct: 183 HRVQRVPVTESAGRVHTSTATVGVMP-EAEDVDIEIDPKDIRTDVYRSSGAGGQHINKTS 241

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+VV  Q ERSQ +N+ +A  +L+A++Y+    + +E     E  K  +G
Sbjct: 242 SAVRMTHLPTGIVVAMQDERSQQQNREKAMRILKARVYDYY--QSQEEDAYNEERKNAVG 299

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       V++G+L++ ++A +   +
Sbjct: 300 TGDRSERIRTYNF-PQNRVTDHRIGLTLNKLDRVMNGELNEIIEALILDDQ 349


>gi|257439051|ref|ZP_05614806.1| peptide chain release factor 1 [Faecalibacterium prausnitzii
           A2-165]
 gi|257198541|gb|EEU96825.1| peptide chain release factor 1 [Faecalibacterium prausnitzii
           A2-165]
          Length = 356

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 104/347 (29%), Positives = 173/347 (49%), Gaps = 12/347 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +    R   L+ +   P    +    + LM+E    +  +   + +            L 
Sbjct: 2   EAVSHRFEELSIRLNQPETAADPALFRRLMQEYHEAEPVVQAYQALTTAQDHLAQAKALL 61

Query: 77  LEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E      +E        K +         +   L     D     +E+  GAGG E+ 
Sbjct: 62  EGETLDPDFKEMVQQEIGEKSQEVAQLENNLKILLLPKDVNDDKSVIMELRGGAGGEEAA 121

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A+ L+RMYT + + R ++ E L +++ E  G+K A L + G  AY  LK E GVHR+ 
Sbjct: 122 LFAHSLMRMYTMYVQSRGWELEVLNLNETELGGVKEAILAVNGAGAYNRLKYESGVHRVQ 181

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + +++ I   D RIDT+R+SGAGGQH+N T SA+R
Sbjct: 182 RVPETETQGRIHTSTATVAVMPQ-AEEVDLVIDPKDLRIDTFRSSGAGGQHINKTSSAIR 240

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+VV+CQ ERSQ +NK +A  +LR++L  L  +++E+   I  +   ++G G  
Sbjct: 241 VTHIPTGMVVECQNERSQFQNKDKALEVLRSRL--LAQKQKEQQDAINANRAGQVGTGDR 298

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P     D R  +   +   ++DG+LD+ + A    ++
Sbjct: 299 SEKIRTYNF-PQDRCTDHRIGLTVHNLDKIMDGNLDEIIDALATHEQ 344


>gi|163789460|ref|ZP_02183899.1| peptide chain release factor 1 [Carnobacterium sp. AT7]
 gi|159875314|gb|EDP69379.1| peptide chain release factor 1 [Carnobacterium sp. AT7]
          Length = 358

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 107/351 (30%), Positives = 174/351 (49%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  ++   R   LN    DP +  +      L +E   +   ++  +  ++   D   
Sbjct: 1   MFDRLESVEGRYEELNELLSDPEVVSDTKRLMKLTKEEAAIRETVATYRRYKEVEQDISD 60

Query: 72  LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             ++  E+ D  + +   +      +      E  +   L   E D  +  +E+   AGG
Sbjct: 61  TEDMLGEKLDSEMAEMAKEELNDLKKEKTEIEEKMKVLMLPKDENDDRNIIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+Q +A  L  MY ++A+ + +KTE L+ +     G K  TL+I G N Y  LK E G 
Sbjct: 121 DEAQLFAGTLFNMYQKYADAQGWKTEVLDANITGIGGYKEITLMITGDNVYSKLKYENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +E+++ + D R D Y ASGAGGQHVN T 
Sbjct: 181 HRVQRVPSTESQGRIHTSTATVVVMP-EAEEVELDLPDKDIRTDIYHASGAGGQHVNKTA 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+ V  Q ERSQ KN+ +A  +LRA++Y+    ++   +      K+ IG
Sbjct: 240 SAVRLTHLPTGIAVAMQDERSQIKNREKAMKVLRARVYDHI--QQAAQSEYDAERKSAIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       +L G LD+ + A +  ++
Sbjct: 298 TGDRSERIRTYNY-PQSRVTDHRIGLTIQKLDQILSGKLDEIIDALVLNEQ 347


>gi|303233066|ref|ZP_07319741.1| peptide chain release factor 2 [Atopobium vaginae PB189-T1-4]
 gi|302480841|gb|EFL43926.1| peptide chain release factor 2 [Atopobium vaginae PB189-T1-4]
          Length = 420

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 127/405 (31%), Positives = 198/405 (48%), Gaps = 52/405 (12%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLM------RE-------- 48
           ++++L+ +      D    +++ L  +      W +   A   M      ++        
Sbjct: 12  VTQRLSDVERALQLDTMQTKIAELEAECAKEDFWGDPARASKTMATLTNLKQTQATMRDA 71

Query: 49  RQHLDNAISFIKEIQDRLCDN-------------------------------------LI 71
              LD+ +   +   D + +                                        
Sbjct: 72  HALLDDLVVAYEFALDEMQNAALPVSGLDISHPHDAAASEATTSGEARSISHIPAASDAA 131

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
                  +    +++E     + +   ++  +         D  DA + +  G GG E+Q
Sbjct: 132 SPADTAAQAQSDMMREAQHTYKTLTGLLDELELNRWFCDPYDQGDAIVTIKPGQGGLEAQ 191

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DW  MLL+MY ++ E++ ++    +    E  GI  AT  + G  AYG LK E GVHRLV
Sbjct: 192 DWCAMLLKMYCKYCERKSWRVTINDCPQAEVIGIDRATFTVHGVRAYGMLKAEAGVHRLV 251

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP D+  RR T+F+ + V PV+ +  ++EI+  D R+D + ASG GGQ VNTTDSAVR
Sbjct: 252 RISPTDAKHRRQTTFAGVEVIPVLPEETDVEINPQDVRVDVFHASGPGGQGVNTTDSAVR 311

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +TH+P+G+VV CQ ERSQ +NKA A  +L+A+LYEL+ Q+R    N  +   T I WG Q
Sbjct: 312 LTHMPSGIVVSCQNERSQLQNKAAAMEILKARLYELQRQQRATQLNDLKGLTTTISWGNQ 371

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y+L P+Q+VKD RT +E  +   VL +G+LD F+ A L  K+
Sbjct: 372 IRNYILYPFQLVKDTRTQVETGNVDAVLQEGNLDPFIIAYLRWKQ 416


>gi|120612308|ref|YP_971986.1| peptide chain release factor 1 [Acidovorax citrulli AAC00-1]
 gi|166223521|sp|A1TTC4|RF1_ACIAC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|120590772|gb|ABM34212.1| bacterial peptide chain release factor 1 (bRF-1) [Acidovorax
           citrulli AAC00-1]
          Length = 360

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 112/343 (32%), Positives = 176/343 (51%), Gaps = 7/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QRL  L+       +  ++ + + + RE   +          + R  D     E+
Sbjct: 9   LERYAQRLEELDFLLSREDIMSDMAQYRTISREHAEVTQVAGRYTRYRQREADLAGAREM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E     +   +++E + Q   L     ++ +A+LE+ AG GG ES  +A
Sbjct: 69  LDDPDMADMAREEIAAAEAELVQLEDELQRLLLPRDPDEARNAFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+A    +K E L   D E  G K   L ++G   YG L+ E G HR+ R+ 
Sbjct: 129 GDLARMYTRYAATAGWKVEILSASDNEIGGYKEVVLRVEGDGVYGALRFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+   I ++ +D RIDT+RASGAGGQH+N TDSAVR+ H
Sbjct: 189 ATETQGRIHTSACTVAVMPEPDEQQAITLNPADLRIDTFRASGAGGQHINKTDSAVRVVH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+V +CQ  RSQH NKA+A  +L+A++ E E  +R   A      K  +G G    +
Sbjct: 249 LPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSER--AAKEAALRKGLVGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IR+Y   P   + D R N+       +++GDL + ++A    +
Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYKLLAIMEGDLGEVLEALRHAR 348


>gi|114777343|ref|ZP_01452340.1| peptide chain release factor 1 [Mariprofundus ferrooxydans PV-1]
 gi|114552125|gb|EAU54627.1| peptide chain release factor 1 [Mariprofundus ferrooxydans PV-1]
          Length = 357

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 114/348 (32%), Positives = 168/348 (48%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            DN + R   +     DP +  +      L RE   ++      +   D        LEL
Sbjct: 5   LDNILHRREEIAVMLADPDVTSDNKRYTALSREFSEIEPVAEEAQHYLDLQQQLADNLEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ-----FESLLSGEADSNDAYLEVHAGAGGTES 130
             + D  + L+E ++   R   +             L     D+ D  LE+ AG GG E+
Sbjct: 65  IADPDCDAELKEMAEAEAREIKQAISASDAALSMLLLPKDPNDNRDVILEIRAGTGGDEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY+R+AE + +K E L   D    G K     I G   +   K E G HR+
Sbjct: 125 ALFAADLFRMYSRYAETQGYKVEILSASDTGIGGYKEIIAQISGNGVFSRFKFESGAHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ + P V + ++I I   D RID YRASGAGGQHVN T+SAV
Sbjct: 185 QRVPETESGGRIHTSACTVAILP-VAEEVDINIRPEDLRIDVYRASGAGGQHVNKTESAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIP+G+VV CQ + SQHKNKAQA  +L+A+L++ E  + +   +     K  +G G 
Sbjct: 244 RITHIPSGLVVTCQDQASQHKNKAQAMKVLQARLFDKEQSELDAERSQA--RKGMVGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   + D R  +       +L GD+ + + A +   +
Sbjct: 302 RSERIRTYNY-PQGRITDHRIGLTLYKLEQILGGDMGELLDALITYHQ 348


>gi|326561123|gb|EGE11488.1| peptide chain release factor 2 [Moraxella catarrhalis 7169]
          Length = 248

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 154/247 (62%), Positives = 194/247 (78%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE D+N+ YL++ +G+GGTE+QDWA MLLRMY RW E   FK E LE+ +G  AGIK
Sbjct: 1   MFSGEMDANNCYLDIQSGSGGTEAQDWAQMLLRMYLRWCESHGFKAEVLEVSEGGVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+++KG  A+GWL+ E GVHRLVR SP+DSN+ RHTSF++++V P +DD+I+I+I+ +
Sbjct: 61  SATIMVKGDYAFGWLRTEIGVHRLVRKSPFDSNNGRHTSFAAVFVSPEIDDNIDIDINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYR+SGAGGQHVNTTDSAVRITH PTGVVV CQ ERSQH NK  A  MLRAKLYE
Sbjct: 121 DLRIDTYRSSGAGGQHVNTTDSAVRITHQPTGVVVACQNERSQHANKDTAMKMLRAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LE+QKR E     E SK++IGWG QIRSYVL     +KDLRT +E ++ + VL+GDLD F
Sbjct: 181 LEMQKRMEKQQALEESKSDIGWGSQIRSYVLDD-SRIKDLRTGVETSNTTAVLNGDLDKF 239

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 240 IEASLKA 246


>gi|290476399|ref|YP_003469304.1| peptide chain release factor RF-2 [Xenorhabdus bovienii SS-2004]
 gi|289175737|emb|CBJ82540.1| peptide chain release factor RF-2 [Xenorhabdus bovienii SS-2004]
          Length = 286

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 164/282 (58%), Positives = 209/282 (74%), Gaps = 1/282 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LLELA+E DD     E    L++++ ++   +F  + SG+ DS + YL++ AG+GGTE+Q
Sbjct: 4   LLELAVEADDEETFNEAVAELEQLEEKLGQLEFRRMFSGQYDSANCYLDLQAGSGGTEAQ 63

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+ML+RM+ RWAE + FKTE +E  DG+ AG+KSAT+ I G  AYGWL+ E GVHRLV
Sbjct: 64  DWASMLMRMFLRWAESKGFKTEIIEESDGDVAGLKSATIKIIGEYAYGWLRTETGVHRLV 123

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS  RRHTSFSS ++YP VDD I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 124 RKSPFDSGGRRHTSFSSAFIYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 183

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPTG+V QCQ +RSQHKNK QA   L+AKLYELE+QK+       E +K++IGWG Q
Sbjct: 184 ITHIPTGLVTQCQNDRSQHKNKDQAMKQLKAKLYELEMQKKNADKQAMEENKSDIGWGSQ 243

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 244 IRSYVLDD-SRIKDLRTGVETRNTQSVLDGDLDKFIEASLKA 284


>gi|170702008|ref|ZP_02892928.1| peptide chain release factor 2 [Burkholderia ambifaria IOP40-10]
 gi|171322226|ref|ZP_02911072.1| peptide chain release factor 2 [Burkholderia ambifaria MEX-5]
 gi|172061072|ref|YP_001808724.1| peptide chain release factor 2 [Burkholderia ambifaria MC40-6]
 gi|170133098|gb|EDT01506.1| peptide chain release factor 2 [Burkholderia ambifaria IOP40-10]
 gi|171092451|gb|EDT37797.1| peptide chain release factor 2 [Burkholderia ambifaria MEX-5]
 gi|171993589|gb|ACB64508.1| peptide chain release factor 2 [Burkholderia ambifaria MC40-6]
 gi|325525095|gb|EGD02988.1| peptide chain release factor 2 [Burkholderia sp. TJI49]
          Length = 248

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 148/247 (59%), Positives = 196/247 (79%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S  AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +AT+ + G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+E++ +
Sbjct: 61  NATVKVTGEYAYGFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E++KR+   +  ESSKT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF
Sbjct: 181 AEMRKRQAEQDKLESSKTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTRAVLDGDLDDF 239

Query: 347 MKATLAI 353
           + A+L  
Sbjct: 240 ISASLKQ 246


>gi|251792904|ref|YP_003007630.1| peptide chain release factor 2 (RF-2) [Aggregatibacter aphrophilus
           NJ8700]
 gi|247534297|gb|ACS97543.1| peptide chain release factor 2 (RF-2) [Aggregatibacter aphrophilus
           NJ8700]
          Length = 289

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 162/288 (56%), Positives = 212/288 (73%), Gaps = 1/288 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + D   LLELA+E +D +   E    L  ++ ++   +F  + SGE D+ D Y+++ AG+
Sbjct: 1   MEDVDGLLELAVEAEDEATFNEAVAELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGS 60

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G  A+GWL+ E 
Sbjct: 61  GGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGVKSATIRVSGEYAFGWLRTET 120

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN 
Sbjct: 121 GIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNK 180

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+       E +K++
Sbjct: 181 TESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSD 240

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 241 IGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 287


>gi|332877580|ref|ZP_08445324.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332684429|gb|EGJ57282.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 315

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 138/308 (44%), Positives = 210/308 (68%), Gaps = 2/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MRE +     +   +E +    D  ++L+   + +  +   +         +E    +F 
Sbjct: 1   MRELRVKKKWVEDYEEAESLTSDVEVMLDFLKDGEASAEEVDQQYTQALHAIEAL--EFR 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LS E D+  A L++ AGAGGTES DWA+MLLRMYT W   +K+K + L   +G+ AG+
Sbjct: 59  NMLSDEGDAMSAVLQITAGAGGTESCDWASMLLRMYTMWCNNQKYKVKTLNFQEGDVAGV 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T+ I+G  A+G+LKGE GVHRLVRISP+DSN++RHTSF+S++VYP+ DD+IEIEI+ 
Sbjct: 119 KTVTIEIEGEYAFGYLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDTIEIEINP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D   +T R+SGAGGQ+VN  ++AVR+ H PTG++++  + RSQ  NK +A  +L+++LY
Sbjct: 179 ADITFETMRSSGAGGQNVNKVETAVRLRHHPTGIIIENSETRSQLDNKNKALQLLKSQLY 238

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+KR+   +  E+ K +I WG QIR+YV+ PY++VKD+RT  E T    V++G+LDD
Sbjct: 239 EIELKKRQAKRDEIEAGKMKIEWGSQIRNYVMHPYKLVKDVRTGYESTDVDSVMNGELDD 298

Query: 346 FMKATLAI 353
           F+KA L +
Sbjct: 299 FLKAYLML 306


>gi|241763794|ref|ZP_04761840.1| peptide chain release factor 1 [Acidovorax delafieldii 2AN]
 gi|241366926|gb|EER61331.1| peptide chain release factor 1 [Acidovorax delafieldii 2AN]
          Length = 362

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 118/343 (34%), Positives = 180/343 (52%), Gaps = 7/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QRL  L+       +  ++ + + + RE   +          Q R  D     E+
Sbjct: 9   LERYAQRLGELDFLLSREDIMADMAQYRTISREHAEVTQIAGRYARYQQREADLAGAREM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + QE   + +   L++E + Q   L     D+ +A++E+ AG GG ES  +A
Sbjct: 69  LADPDMAEMAQEEITSAEAELLQLEDELQRLLLPKDPDDARNAFVEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+A++  +K E +  +  E  G K   L I+G + YG LK E G HR+ R+ 
Sbjct: 129 GDLTRMYMRYADRVGWKVEVVSENAAELGGYKEIVLRIEGDHVYGALKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P  D+   I+++ +D RIDT+RASGAGGQH+N TDSAVR+ H
Sbjct: 189 ATETQGRIHTSACTVAVMPEPDEHEAIKLNPADLRIDTFRASGAGGQHINKTDSAVRVVH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+V +CQ  RSQH NKA+A  +L+A++ E E  +R   A      K  IG G    +
Sbjct: 249 LPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSER--AAKEAALRKGLIGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IR+Y   P   + D R N+       V+DGDL D ++A    +
Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYKLQYVMDGDLADVLQALAHAR 348


>gi|254251975|ref|ZP_04945293.1| peptide chain release factor 2 [Burkholderia dolosa AUO158]
 gi|124894584|gb|EAY68464.1| peptide chain release factor 2 [Burkholderia dolosa AUO158]
          Length = 248

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 149/247 (60%), Positives = 196/247 (79%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S  AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +AT+ + G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +
Sbjct: 61  NATIKVTGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E++KR+   +  ESSKT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF
Sbjct: 181 AEMRKRQAEQDKLESSKTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTKAVLDGDLDDF 239

Query: 347 MKATLAI 353
           + A+L  
Sbjct: 240 ISASLKQ 246


>gi|23015680|ref|ZP_00055449.1| COG0216: Protein chain release factor A [Magnetospirillum
           magnetotacticum MS-1]
          Length = 354

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 117/345 (33%), Positives = 185/345 (53%), Gaps = 10/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           +D  + R   +  +        +    + L +E   LD  ++ +   +    D +   E+
Sbjct: 7   FDKVLYRHDEVRAQLSSGDGL-DSQTIQRLSKELSELDPVVTAVVAFRKAREDMVQAAEM 65

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E    L+          Q   L   EAD  +A +EV AG GG E+  +A
Sbjct: 66  MNDPDMKDLAEEEFYALKERLPALEREVQIMLLPKDEADEKNAIIEVRAGTGGEEAALFA 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+A    ++ E ++++D    G+K A+  I G N +  LK E GVHR+ R+ 
Sbjct: 126 AELFRMYERYASVHGWRFEVMDVNDTGIGGVKEASATITGRNVFARLKFESGVHRVQRVP 185

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ + P   + ++I++++SD R D YR+ G+GGQ VNTTDSAVR+TH
Sbjct: 186 ATESQGRIHTSAATVAIMP-EAEEVDIQLNDSDLRFDVYRSQGSGGQSVNTTDSAVRVTH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+ V CQQE+SQHKNKA A  +LRA+LY  E ++  + A    + K+++G G    +
Sbjct: 245 IPTGLAVACQQEKSQHKNKATALKLLRARLY--ERERSAKDAERAAARKSQVGSGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           IR+Y   P   V D R N+       V+ GD LD+ ++A +A  +
Sbjct: 303 IRTYNF-PQGRVTDHRINLTLYKIDAVMSGDALDELIEALVAADQ 346


>gi|89898158|ref|YP_515268.1| peptide chain release factor 1 [Chlamydophila felis Fe/C-56]
 gi|119361521|sp|Q255B5|RF1_CHLFF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|89331530|dbj|BAE81123.1| peptide chain release factor RF-1 [Chlamydophila felis Fe/C-56]
          Length = 361

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 112/340 (32%), Positives = 174/340 (51%), Gaps = 11/340 (3%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLELAL 77
           +RL  +  K  DP ++ N  E   L RE   L    +   ++   +  L D+   L    
Sbjct: 10  KRLEEVEVKISDPEIFNNPKEYSSLSREHARLTELKNVYDKVLRHEKILNDDKHALAQEK 69

Query: 78  EEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           + +  ++L+E   +    I+   +  +   +     D  +  +E+ AG GG E+  +   
Sbjct: 70  DPEMIAMLEEGIQSGKSEIEKLYKILENLLVPPDPDDDLNVIMELRAGTGGDEAALFVGD 129

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
            +RMY  +A  + +K E L   + +  G K   + I G      L+ E G HR+ R+   
Sbjct: 130 CVRMYHLYASAKGWKYEELSASESDIGGYKEYVMGISGTGVKRLLQYEAGTHRVQRVPET 189

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEI-SESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           ++  R HTS  ++ V P   +  E     E D +IDT+RASGAGGQHVN TDSAVRITH+
Sbjct: 190 ETQGRVHTSAITVAVLPEPAEDDEEVFVDEKDLKIDTFRASGAGGQHVNVTDSAVRITHL 249

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTGVVV CQ ERSQHKNKA+A  +L+A++ + E+Q+R + A+   S   ++G G    +I
Sbjct: 250 PTGVVVTCQDERSQHKNKAKAMRILKARIRDAEMQRRHKEASAMRS--AQVGSGDRSERI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           R+Y       V D R  +   +   V++GDLD    A ++
Sbjct: 308 RTYNFS-QNRVTDHRIGLTLYNLDKVMEGDLDTITSALVS 346


>gi|257452270|ref|ZP_05617569.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_5R]
 gi|257465930|ref|ZP_05630241.1| peptide chain release factor 2 [Fusobacterium gonidiaformans ATCC
           25563]
 gi|315917086|ref|ZP_07913326.1| peptide chain release factor 2 [Fusobacterium gonidiaformans ATCC
           25563]
 gi|317058813|ref|ZP_07923298.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_5R]
 gi|313684489|gb|EFS21324.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_5R]
 gi|313690961|gb|EFS27796.1| peptide chain release factor 2 [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 326

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 155/324 (47%), Positives = 217/324 (66%), Gaps = 1/324 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +   W +   +  +++        ++  + + + + +  +L+E     D+ S ++   + 
Sbjct: 2   EEGFWNDKRSSSAVIKTMNEEKALLASFQSLVEEMEEEEVLIEFVEAGDEMSQIE-LEEK 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
            +++  ++E      LL GE D N+A + +H+GAGGTE+ DWA+ML RMYTRW   +K+K
Sbjct: 61  HKQLLKDMESFSTSLLLDGEYDGNNAIVTIHSGAGGTEACDWADMLYRMYTRWCNDKKYK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   G+  GIKS T L+ G +AYG+LK E+G+HRLVRISP+D+N +RHTSF+S+ V
Sbjct: 121 VEEMDFMPGDSVGIKSITFLVSGYHAYGYLKCEKGIHRLVRISPFDANKKRHTSFASVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P VD+S+E+EI  SD RIDTYRASGAGGQHVN TDSAVRITH PTG+VV CQ+ERSQ  
Sbjct: 181 VPEVDESVEVEIEASDIRIDTYRASGAGGQHVNMTDSAVRITHFPTGIVVTCQKERSQLS 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A  ML++KL E+EL+K+EE     +  ++EIGWG QIRSYV QPY MVKD RT +E
Sbjct: 241 NRETAMKMLKSKLLEIELKKKEEEMKKIQGEQSEIGWGSQIRSYVFQPYTMVKDHRTGVE 300

Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355
             +   V+DGDLDDFM   L   K
Sbjct: 301 IGNIKAVMDGDLDDFMNGYLRWNK 324


>gi|313665080|ref|YP_004046951.1| peptide chain release factor 1 [Mycoplasma leachii PG50]
 gi|312949513|gb|ADR24109.1| peptide chain release factor 1 [Mycoplasma leachii PG50]
          Length = 363

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 118/347 (34%), Positives = 182/347 (52%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---LCDNLIL 72
            +   +RL  +    ED ++ +++ +   L +E+ +L+  +    E +     + D   +
Sbjct: 9   LETMQKRLFQIQKDLEDENILKDIKKFTELNKEKANLEEVVEKFVEYKKAVDHIKDAKAI 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LE   + +   + +   D        ++   +   L     D  +  +E+   AGG E+ 
Sbjct: 69  LENEKDTELIELAKIELDENNDKVEHLQQVIEEMLLPKDPNDEKNVIVEIRGAAGGDEAN 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY  +AE + +K   LE   GE  G      +IKG   Y  LK E G HR+ 
Sbjct: 129 IFAGDLLRMYKLYAETQNWKINILEASLGEAGGYSQVVFMIKGDRVYSKLKFESGAHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R  TS +++ V P     +EIEI  +D RIDTYRASGAGGQHVNTTDSAVR
Sbjct: 189 RVPKTEAKGRIQTSTATVAVLP-EMSEVEIEIRSNDLRIDTYRASGAGGQHVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV  Q  RSQH NK  A  MLRAK+YE E++K++  A+   + K  +G G  
Sbjct: 248 ITHLPTGIVVTSQDGRSQHDNKDIAMTMLRAKVYEAEVEKQQAQAD--ATRKNAVGTGAR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       V++G++D+F+ A +  ++
Sbjct: 306 SEKIRTYNY-PQNRVTDHRIGLTLNKLDQVMEGNIDEFIIALINEEQ 351


>gi|171911189|ref|ZP_02926659.1| peptide chain release factor 1 [Verrucomicrobium spinosum DSM 4136]
          Length = 358

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 106/345 (30%), Positives = 174/345 (50%), Gaps = 10/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72
            +    R S L      P+ + +  +A  L+RE + L+  +    E    + ++ DN  L
Sbjct: 7   IEKKKDRFSELEEMMGHPNFYDDNRKAGDLLREHRSLEALVKAWSEYQRTEQQIADNQEL 66

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +    E      +E      R+       Q   L     +  D  +E+ AG GG E+  
Sbjct: 67  AKSGDAELAALAEEELPTLQARLLELEGEVQRHILPPDPLEGRDVIMEIRAGTGGDEAAI 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY R+AE+R +K E++E    +  G K     + G + +  LK E GVHR+ R
Sbjct: 127 FAGDLYRMYNRYAEERGWKIESMEASPSDAGGYKEVVFKVSGEDVFRTLKYESGVHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P   + +++++   + RI+  RASG GGQ VNTTDSAV++
Sbjct: 187 VPATEAQGRIHTSAATVAVLP-EAEEVDLQLKPDELRIEVCRASGHGGQGVNTTDSAVQV 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
            H+PTG++V+CQ  RSQ KNK +A  ++R++L  LE +++EE A      K  IG G   
Sbjct: 246 MHLPTGMIVRCQDGRSQLKNKEKAITIMRSRL--LEKKQQEEAAKYSAHRKALIGGGGRE 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +IR+Y   P   + D R ++   +    +DG + D +    A +
Sbjct: 304 EKIRTYNY-PQNRITDHRIDVTLYNLDMFVDGRIGDLVDKLQASE 347


>gi|320008549|gb|ADW03399.1| peptide chain release factor 1 [Streptomyces flavogriseus ATCC
           33331]
          Length = 358

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 115/350 (32%), Positives = 174/350 (49%), Gaps = 16/350 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +  +   + L  K  DP +  +   A+ L +    L   +S  +  +    D   
Sbjct: 1   MFEAVEELIGEHADLEKKLADPSVHADQANARKLNKRYAELTPIVSTYRSWKQTGDDIGT 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E     DD     E     ++ +   E  +   +    +D  D  LE+ AGAGG ES 
Sbjct: 61  AREF--AADDPDFAAEVKVLEKQREEITEKLRLLLVPRDPSDDKDVLLEIKAGAGGDESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG----------PNAYGWL 181
            +A  LLRMY R+AE+  +KTE ++  + E  G K   + +K              +  +
Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVAVKTKGGNGATEPGQGVWARM 178

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   +S  R HTS + + V P   + +++EI  +D RID YR+SG GGQ
Sbjct: 179 KYEGGVHRVQRVPSTESQGRIHTSAAGVLVTP-EAEEVDVEIHANDLRIDVYRSSGPGGQ 237

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR++L     +  E+ A+    
Sbjct: 238 SVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEAAEQEASDVRR 297

Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           S+   +    +IR+Y   P   + D R   +  +   VLDGDLD  ++A 
Sbjct: 298 SQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLDAVIQAC 346


>gi|260576769|ref|ZP_05844754.1| peptide chain release factor 1 [Rhodobacter sp. SW2]
 gi|259021021|gb|EEW24332.1| peptide chain release factor 1 [Rhodobacter sp. SW2]
          Length = 351

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 177/344 (51%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R  FL  K           E   L RE   L   ++ I   +  L D      L
Sbjct: 7   LDQISRRFEFLEAKLAAGAGH---AEIASLSREYTDLKPVVAEISAYRRALDDLAQAEAL 63

Query: 76  ALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E       RI    +  +   L    AD+  A LE+  G GG E+  +A
Sbjct: 64  LADPEMRPLAEEELPSLKARIPELEQALRLALLPKDAADARPAILEIRPGTGGDEAALFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE + ++ E ++  D +  GI+  T+ ++G   +  LK E GVHR+ R+ 
Sbjct: 124 ADLLRMYQRYAESQGWRFEIIDQQDSDLGGIRDVTVHVQGAGVFAKLKYESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++++I  SD RIDT RASGAGGQHVNTTDSAVRITH
Sbjct: 184 ETESQGRVHTSAATVAVLP-EAEEVDLDIPASDIRIDTMRASGAGGQHVNTTDSAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG++V    ++SQH+N+  A  +LRA+LY+LE  + +         K ++G G    +
Sbjct: 243 LPTGIIVTSA-QKSQHRNRDLAMQVLRARLYDLERARVD--GARAADRKAQVGSGDRSER 299

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+   +   ++ GDL   + A +A  +
Sbjct: 300 IRTYNF-PQGRLTDHRINLTLYALPQIMAGDLGGVIDALVAQDQ 342


>gi|227552473|ref|ZP_03982522.1| peptide chain release factor RF1 [Enterococcus faecium TX1330]
 gi|257888289|ref|ZP_05667942.1| peptide chain release factor 1 [Enterococcus faecium 1,141,733]
 gi|257896821|ref|ZP_05676474.1| peptide chain release factor 1 [Enterococcus faecium Com12]
 gi|257899725|ref|ZP_05679378.1| peptide chain release factor 1 [Enterococcus faecium Com15]
 gi|293378550|ref|ZP_06624713.1| peptide chain release factor 1 [Enterococcus faecium PC4.1]
 gi|293571480|ref|ZP_06682507.1| peptide chain release factor 1 [Enterococcus faecium E980]
 gi|227178385|gb|EEI59357.1| peptide chain release factor RF1 [Enterococcus faecium TX1330]
 gi|257824343|gb|EEV51275.1| peptide chain release factor 1 [Enterococcus faecium 1,141,733]
 gi|257833386|gb|EEV59807.1| peptide chain release factor 1 [Enterococcus faecium Com12]
 gi|257837637|gb|EEV62711.1| peptide chain release factor 1 [Enterococcus faecium Com15]
 gi|291608485|gb|EFF37780.1| peptide chain release factor 1 [Enterococcus faecium E980]
 gi|292642879|gb|EFF61026.1| peptide chain release factor 1 [Enterococcus faecium PC4.1]
          Length = 357

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 107/347 (30%), Positives = 172/347 (49%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---DNLIL 72
             +   R   L     DP +  +      L +E  +    +   +  ++ +    D   L
Sbjct: 5   LQSIEDRYEELGELLSDPEVISDTKRFMQLSKEEANTRETVEVYRRYKEVVQGITDTEEL 64

Query: 73  LELALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L   L+++      +E S+  +  ++  E  +   L     D  +  +E+   AGG E+ 
Sbjct: 65  LGEKLDDEMAELAKEELSELKKEKEVLEEKIKILLLPKDPNDDKNIIMEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY ++AE + +KTE +E +     G K   ++I G N Y  LK E G HR+ 
Sbjct: 125 LFAGDLFNMYQKYAEAQGWKTEVMEANVTGIGGYKEVIMMITGENVYSKLKYESGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +EI+I + D R D Y ASGAGGQHVN T SAVR
Sbjct: 185 RVPSTESQGRIHTSTATVVVMP-EAEEVEIDIEDKDIRTDIYHASGAGGQHVNKTASAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q ERSQ KN+ +A  +LRA++Y+    ++E  +    + K+ +G G  
Sbjct: 244 LTHLPTGIVVAMQDERSQIKNREKAMKILRARVYDKI--QQEAQSEYDANRKSAVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 302 SERIRTYNF-PQNRVTDHRIGLTIQKLDQILAGKLDEIVDALIMYDQ 347


>gi|161524328|ref|YP_001579340.1| peptide chain release factor 2 [Burkholderia multivorans ATCC
           17616]
 gi|189350916|ref|YP_001946544.1| peptide chain release factor 2 [Burkholderia multivorans ATCC
           17616]
 gi|160341757|gb|ABX14843.1| peptide chain release factor 2 [Burkholderia multivorans ATCC
           17616]
 gi|189334938|dbj|BAG44008.1| peptide chain release factor 2 [Burkholderia multivorans ATCC
           17616]
          Length = 248

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 150/247 (60%), Positives = 196/247 (79%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S  AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +AT+ + G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +
Sbjct: 61  NATIKVSGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            EL+KR+   +  ESSKT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF
Sbjct: 181 AELRKRQAEQDKLESSKTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTKAVLDGDLDDF 239

Query: 347 MKATLAI 353
           + A+L  
Sbjct: 240 ISASLKQ 246


>gi|254247791|ref|ZP_04941112.1| Peptide chain release factor 2 [Burkholderia cenocepacia PC184]
 gi|124872567|gb|EAY64283.1| Peptide chain release factor 2 [Burkholderia cenocepacia PC184]
          Length = 248

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 149/247 (60%), Positives = 197/247 (79%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S  AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +AT+ + G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +
Sbjct: 61  NATVKVTGEYAYGFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++LYE
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +E++KR+   +  ESSKT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF
Sbjct: 181 VEMRKRQAEQDKLESSKTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTRAVLDGDLDDF 239

Query: 347 MKATLAI 353
           + A+L  
Sbjct: 240 ISASLKQ 246


>gi|28199883|ref|NP_780197.1| peptide chain release factor 1 [Xylella fastidiosa Temecula1]
 gi|71899967|ref|ZP_00682113.1| Peptide chain release factor 1 [Xylella fastidiosa Ann-1]
 gi|182682635|ref|YP_001830795.1| peptide chain release factor 1 [Xylella fastidiosa M23]
 gi|32129935|sp|Q87A17|RF1_XYLFT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238691124|sp|B2IA85|RF1_XYLF2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|28058004|gb|AAO29846.1| peptide chain release factor 1 [Xylella fastidiosa Temecula1]
 gi|71730254|gb|EAO32339.1| Peptide chain release factor 1 [Xylella fastidiosa Ann-1]
 gi|182632745|gb|ACB93521.1| peptide chain release factor 1 [Xylella fastidiosa M23]
 gi|307578915|gb|ADN62884.1| peptide chain release factor 1 [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 361

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 110/340 (32%), Positives = 173/340 (50%), Gaps = 8/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L     DP +  +    +   RE   L    + + E      D      L
Sbjct: 9   LEALAERHEELERLLSDPKIASDTDRFRTYSRELAQLAPIATTLAEETRTKADLAAAETL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + ++     Q     ++ + Q   +     D  + +LEV AG GG E+  +A
Sbjct: 69  RTDPEMRELAEQEIAIAQAHLTTLDEQLQRLLIPQDPRDECNLFLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+AE++++K E      GE  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GNLFRMYTRYAERQRWKVEVESDTPGEHGGYKEIIARIVGRGAYSRLKFESGTHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ + P  D+  +I I+ +D +IDT+R+SGAGGQHVN T+SA+RITH
Sbjct: 189 ATESQGRIHTSAATVAIIPEADEIADISINPADLKIDTFRSSGAGGQHVNKTESAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311
           +PTGVVV+ Q ERSQH N+ +A   L+A+L  +E Q+ ++      + K ++G G    +
Sbjct: 249 LPTGVVVESQTERSQHANRDKAMKRLKAQL--IESQRSQQATAEAMTRKLQVGSGDRSQR 306

Query: 312 IRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   + D R  N+      ++++GDLD  +   
Sbjct: 307 IRTYNF-PQGRITDHRVENLTLYDLPNIIEGDLDPLIDRL 345


>gi|71892127|ref|YP_277859.1| peptide chain release factor 1 [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|119361510|sp|Q492V8|RF1_BLOPB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71796233|gb|AAZ40984.1| peptide chain release factor 1 (RF-1) [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 360

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 109/342 (31%), Positives = 176/342 (51%), Gaps = 7/342 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              +R + L      P+   +      L +E   L   +   +   D   + +   +L  
Sbjct: 11  ALQERFNVLEKLLSKPNAIDDKKHFCTLAKEHARLSEIVVCFERWLDIKQEIINTKKLLE 70

Query: 78  EEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           + D   I Q+        +  +E   +   L +   D    ++E+ AG GG E+  +   
Sbjct: 71  DVDMHDIAQDELKTFYLNRNNIEKNLKILLLPTDSNDKLGCFIELRAGTGGKEAAIFTGE 130

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RMY R++E R++K E +    GE  G K     I    AY  LK E G HR+ RI   
Sbjct: 131 LFRMYVRYSEVRRWKMEIINATYGECGGYKEIIAKIPYRGAYSLLKFESGGHRVQRIPHT 190

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS  +I V P + D     I   D RIDT+R+SGAGGQHVNTTDSA+RITH+P
Sbjct: 191 ESQGRIHTSTCTIAVIPEIPDIELPSIDPHDLRIDTFRSSGAGGQHVNTTDSAIRITHVP 250

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           +G+VV+CQ ERSQHKNKA+A ++L ++L+ +E+++R++  +   + +  +G G    +IR
Sbjct: 251 SGLVVECQDERSQHKNKAKALSVLGSRLHAIEMKRRQQEVSC--TRRNLLGTGDRSDRIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y  Q    + D R +      +++++G+LD  ++  +   +
Sbjct: 309 TYNFQ-QGRITDHRISFTSYKLNEIMNGELDLLIQPIIHQHQ 349


>gi|293394608|ref|ZP_06638902.1| peptide chain release factor RF2 [Serratia odorifera DSM 4582]
 gi|291422917|gb|EFE96152.1| peptide chain release factor RF2 [Serratia odorifera DSM 4582]
          Length = 248

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 155/247 (62%), Positives = 192/247 (77%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE DS D YL++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  DG+ AG+K
Sbjct: 1   MFSGEYDSADCYLDIQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEVIEESDGDVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS++VYP VD+ I+I+I+ +
Sbjct: 61  SATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFVYPEVDEDIDIDINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+  LRAKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E+QK+       E +K++IGWG QIRSYVL     +KDLRTN+E  +   VLDGDLD F
Sbjct: 181 YEMQKKNADKQALEDNKSDIGWGSQIRSYVLDD-SRIKDLRTNVETRNTQAVLDGDLDKF 239

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 240 IEASLKA 246


>gi|288801053|ref|ZP_06406509.1| peptide chain release factor 2, programmed [Prevotella sp. oral
           taxon 299 str. F0039]
 gi|288331987|gb|EFC70469.1| peptide chain release factor 2, programmed [Prevotella sp. oral
           taxon 299 str. F0039]
          Length = 373

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 123/359 (34%), Positives = 204/359 (56%), Gaps = 12/359 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +  + + L    + +           +T+ P  W +V  A+  M++ + ++  +   KE+
Sbjct: 10  IQERADALHAYLNIEEKKVEFEEEQLRTQAPDFWDDVERAQEQMKKVKGIEKWLVGYKEV 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +    +    L      D+     E  +  ++    VE  +  ++L  + D  D  L+++
Sbjct: 70  RLLADELQ--LSFDFFHDEMVSESEVDETYKKALQAVEALELMNMLRQKEDPMDCVLKIN 127

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-PNAYGWL 181
           +GAGGTESQDWA+ML+R+Y RWAE    K     + +G+EAGIKS T+ I+G   AYG+L
Sbjct: 128 SGAGGTESQDWASMLMRLYMRWAESHGHKVTISNLQEGDEAGIKSVTMEIEGGEFAYGYL 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHRLVR+SP+++  +R TSF+S++V P+VDD+IE+ +  S    D +R+ GAGGQ
Sbjct: 188 KSENGVHRLVRVSPFNAQGKRMTSFASVFVSPLVDDTIEVYVDPSKVSWDLFRSGGAGGQ 247

Query: 242 HVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  ++ VR+ +  T         ++++  + R Q +N+  A  +L+++LY+  ++KR 
Sbjct: 248 NVNKVETGVRLRYQYTDPDTGVEEEILIENTESRKQLENRNNAMRLLKSQLYDRAMKKRL 307

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           E     E+ K +I WG QIRSYV    + VKD RTN + T    V++G +D+F+KA L 
Sbjct: 308 EAQAKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTTDVDGVMNGKIDEFIKAYLM 365


>gi|255004320|ref|ZP_05279121.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str.
           Virginia]
          Length = 255

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 153/249 (61%), Positives = 188/249 (75%), Gaps = 1/249 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA-EKRKFKTEALEIHDGEEAGI 165
           + SGEAD +  +L +  GAGGTES DWA MLLRMY RWA     F TE ++  DGE AG+
Sbjct: 1   MFSGEADGSGCFLVIRPGAGGTESNDWAAMLLRMYIRWAGTFHGFTTEIVDKIDGEAAGL 60

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KS T+ I G  AYGW K E GVHRLVRISP+DS+SRRHTSF+S+ V P+ DD I+IEI E
Sbjct: 61  KSVTVKISGNGAYGWAKTESGVHRLVRISPFDSSSRRHTSFASVEVSPIADDKIDIEILE 120

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D RIDTYRASGAGGQHVN T+SAVRITH+P+G+VVQCQ  RSQH+N+A+A+++LR++LY
Sbjct: 121 KDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVVQCQTSRSQHQNRAEAYSLLRSRLY 180

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+ELQ++E+       S+ +IGWG QIRSYV+ PY+MVKDLRT  E      VLDGDLD 
Sbjct: 181 EMELQEKEKKMAQEHDSRCDIGWGHQIRSYVMHPYRMVKDLRTGHETGDVDAVLDGDLDK 240

Query: 346 FMKATLAIK 354
           F+ A L  K
Sbjct: 241 FIAAALTYK 249


>gi|218283971|ref|ZP_03489832.1| hypothetical protein EUBIFOR_02428 [Eubacterium biforme DSM 3989]
 gi|218215488|gb|EEC89026.1| hypothetical protein EUBIFOR_02428 [Eubacterium biforme DSM 3989]
          Length = 358

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 112/346 (32%), Positives = 176/346 (50%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +N       +  +      L RE+  L   +   +E +  + +      L
Sbjct: 8   LEKMVERYREINDLMMQSDVVSDRKTMAKLGREQNELTPIVETYEEYKKAVEELEEAKVL 67

Query: 76  ALEED---DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           + EED         E  +   +I+  ++  +   +     DS++A LE+   AGG E   
Sbjct: 68  SKEEDKEIREMAQMELEELEPKIQNYLDRLELLLVPKDPNDSHNAILEIRGAAGGDEGNI 127

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AE + ++TE +E+ D E  G    +  + G  AYG LK E G HR+ R
Sbjct: 128 FAGDLFRMYSKYAEAKGWRTEVIEMEDSEAGGFSLVSFKVNGEGAYGTLKFESGSHRVQR 187

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++   P   ++ + +I  +D  I+T R+SGAGGQH+N TDSAVRI
Sbjct: 188 VPKTESQGRIHTSTATVLCMP-EVEAEDFDIDMNDLEIETMRSSGAGGQHINKTDSAVRI 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
            H PTG+VV+CQ  RSQH+N+A A   +RA++Y  E ++RE      +  +T+IG G   
Sbjct: 247 VHKPTGIVVKCQDGRSQHENRATALMTIRARVY--EERQRELDQKNEKERRTKIGTGDRA 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R          ++DG LDD M A     +
Sbjct: 305 EKIRTYNY-PQNRVTDHRIGYTVNQLDRIMDGRLDDLMAALQLADQ 349


>gi|114766145|ref|ZP_01445149.1| peptide chain release factor 1 [Pelagibaca bermudensis HTCC2601]
 gi|114541605|gb|EAU44647.1| peptide chain release factor 1 [Roseovarius sp. HTCC2601]
          Length = 349

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 174/341 (51%), Gaps = 14/341 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +R  +L  +  +     ++     L RE   L   +  I +      D      +
Sbjct: 7   LQQIRERFEYLEARMAEGS--GDIA---ALGREYAELRPVVDQIHDWTSLQADLAEAEAM 61

Query: 76  ALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E       R+    +  Q   L    AD+  A LE+  G GG E+  +A
Sbjct: 62  LDDPEMKELAEEELPGLRARLPEAEKALQLALLPKDAADARPAMLEIRPGTGGEEAALFA 121

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+AE R ++ E +E    E  G++   + I+G N +  LK E GVHR+ R+ 
Sbjct: 122 GDLARMYQRYAEARGWRWEVIEEQPTELGGLRELVVRIEGDNVFARLKYESGVHRVQRVP 181

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   ++++I+I+ +D RIDT RASGAGGQHVNTTDSAVRITH
Sbjct: 182 ETESGGRIHTSAATVAVLP-EAEAVDIDIAAADIRIDTMRASGAGGQHVNTTDSAVRITH 240

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV    E+SQH+N+  A N+LR +L++LE QK           K ++G G    +
Sbjct: 241 IPTGIVVTSS-EKSQHRNREIAMNVLRTRLFDLERQK--AADARASDRKAQVGSGDRSER 297

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R  +       +L GDLD+ + A  A
Sbjct: 298 IRTYNF-PQGRMTDHRIGLTLYRLEQILAGDLDEIIDALTA 337


>gi|21241714|ref|NP_641296.1| peptide chain release factor 1 [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|294626107|ref|ZP_06704714.1| peptide chain release factor 1 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294666025|ref|ZP_06731287.1| peptide chain release factor 1 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|24418638|sp|Q8PNU5|RF1_XANAC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|21107082|gb|AAM35832.1| peptide chain release factor 1 [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|292599556|gb|EFF43686.1| peptide chain release factor 1 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292604217|gb|EFF47606.1| peptide chain release factor 1 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 361

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 112/345 (32%), Positives = 173/345 (50%), Gaps = 8/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +R   L     DP +  N    + L RE   L+     ++E      D      L
Sbjct: 9   LQALAERREELQHLLSDPDVVGNNDTFRTLSRELSQLEPVAVALEEEARAKADLATAEAL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQF-ESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E     Q    +++ +     +     D  + +LEV AG GG E+  +A
Sbjct: 69  RNDPEMRELAEEEIAAAQARLEQLDAQLASLLVPRDPRDDGNLFLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+AE++ +K E      GE  G K     + G  AY  LK E G HR+ R+ 
Sbjct: 129 GDLFRMYARYAERQGWKVEIESDSPGEHGGYKEVVARVVGRGAYSRLKFESGTHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ + P  DD  EI I+ +D ++DT+R+SGAGGQHVN T+SA+RITH
Sbjct: 189 ATESQGRIHTSAATVAIIPEADDVEEITINPADLKVDTFRSSGAGGQHVNKTESAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311
           +P+GVVV+CQ ERSQH N+ +A   L+A+L + E  K    A   ++ K ++G G    +
Sbjct: 249 VPSGVVVECQTERSQHANRDKAMKRLKAQLLDTERSK--AAAAEAQTRKLQVGSGDRSQR 306

Query: 312 IRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R   +      ++++GDLD  +   L   +
Sbjct: 307 IRTYSF-PQGRITDHRVEGLTLYDLPNIIEGDLDALIGRLLHEHQ 350


>gi|306844842|ref|ZP_07477425.1| peptide chain release factor 1 [Brucella sp. BO1]
 gi|306274774|gb|EFM56555.1| peptide chain release factor 1 [Brucella sp. BO1]
          Length = 359

 Score =  216 bits (549), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 116/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 10  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARKEASDLAAM 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  +        +      +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 66  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 126 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 186 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK    +   ++ ++++G G 
Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V++GDLD+ + A ++  +
Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQ 348


>gi|15839238|ref|NP_299926.1| peptide chain release factor 1 [Xylella fastidiosa 9a5c]
 gi|20139358|sp|Q9PA71|RF1_XYLFA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|9107880|gb|AAF85446.1|AE004071_14 peptide chain release factor 1 [Xylella fastidiosa 9a5c]
          Length = 361

 Score =  216 bits (549), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 110/340 (32%), Positives = 174/340 (51%), Gaps = 8/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   L     DP +  +    +   RE   L    + + E      D      L
Sbjct: 9   LEALVERHEELERLLSDPKIVSDTDRFRTYSRELAQLAPIATTLAEETRTKADLAAAETL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + ++     Q     ++ + Q   +     D  + +LEV AG GG E+  +A
Sbjct: 69  RTDPEMRELAEQEIAIAQAHLTTLDEELQRLLIPQDPRDECNLFLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+AE++++K E      GE  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GNLFRMYTRYAERQRWKVEVESDTPGEHGGYKEIIARIVGRGAYSRLKFESGTHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ + P  D+  +I I+ +D +IDT+R+SGAGGQHVN T+SA+RITH
Sbjct: 189 ATESQGRIHTSAATVAIIPEADEIADISINPADLKIDTFRSSGAGGQHVNKTESAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311
           +PTGVVV+ Q ERSQH N+ +A   L+A+L  +E ++ ++      + K ++G G    +
Sbjct: 249 LPTGVVVESQTERSQHANRDKAMKRLKAQL--IESERSQQATAEAMTRKLQVGSGDRSQR 306

Query: 312 IRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   + D R  N+      ++++GDLD  +   
Sbjct: 307 IRTYNF-PQGRITDHRVENLTLYDLPNIIEGDLDPLIDRL 345


>gi|291568918|dbj|BAI91190.1| peptide chain release factor 2 [Arthrospira platensis NIES-39]
          Length = 316

 Score =  216 bits (549), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 139/306 (45%), Positives = 202/306 (66%), Gaps = 1/306 (0%)

Query: 50  QHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS 109
             L + +   ++ +  L D   + EL   EDD S+ QE   N+  +  +++  + + LLS
Sbjct: 2   SDLKSVLQQQQDWRKTLEDTGAIAELLELEDDESLRQEAESNVVHLGRDIDRWELQQLLS 61

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
           G  D + A L ++AGAGGT++QDWA MLLRMYTRW E + +K    E+ +G+EAGIKSAT
Sbjct: 62  GPYDRSGAVLTINAGAGGTDAQDWAEMLLRMYTRWGEAQGYKVHLAELSEGDEAGIKSAT 121

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDC 228
           L ++GP AYG+LK E+G HRLVRISP+++N +R TSF+ + + P+  + +I ++I E D 
Sbjct: 122 LEMEGPYAYGYLKAEKGTHRLVRISPFNANGKRQTSFAGVEIMPILDEGAINLDIPEKDL 181

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
            I T RA G GGQ+VN  ++AVRI HIPTG+ V+C QERSQ +N+ +A  +L+AKL  + 
Sbjct: 182 EITTSRAGGKGGQNVNKVETAVRIVHIPTGIAVRCTQERSQLQNREKAMALLKAKLLVVA 241

Query: 289 LQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            ++R +          E  WG QIR+YV  PYQMVKDLRT  E T+ +DV++G+LD F++
Sbjct: 242 QEQRAQAIAEIRGDLVEAAWGNQIRNYVFHPYQMVKDLRTGEETTAINDVMNGELDGFIQ 301

Query: 349 ATLAIK 354
           A L  +
Sbjct: 302 AYLRQE 307


>gi|258512739|ref|YP_003186173.1| peptide chain release factor 1 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257479465|gb|ACV59784.1| peptide chain release factor 1 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 356

 Score =  216 bits (549), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 110/351 (31%), Positives = 180/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   +  +R   L+     P +  +  + +   +E+  L   +   +E +    +   
Sbjct: 1   MFDRLASMEERYEHLSQLLCRPDVASDPEKLRSYAKEQAELAETVEVYREWKKVSQNIDE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
              +  ++ D  + +     L  ++   E  +       L     D  D ++E+ A AGG
Sbjct: 61  AKAMLQDKLDDEMREFVRAELAELQRRREGLEHRLKILLLPKDPNDDKDVFVEIRAAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  LLRMY R+AEK  +KTE ++    +  G +   + + G  AY  LK E G 
Sbjct: 121 EEAALFAAELLRMYQRYAEKHGWKTEIIDASYTDMGGFREVVMAVHGKGAYAKLKFESGT 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++       + +E+EI E D RIDT+ ++G GGQ VNTT 
Sbjct: 181 HRVQRVPVTESGGRIHTSTATVA-VLPEVEEVEVEIHEKDLRIDTFCSTGPGGQSVNTTQ 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+VV CQ E+SQ KNK +A  +LRA+LYE   ++++E   +    + ++G
Sbjct: 240 SAVRITHLPTGIVVSCQDEKSQLKNKEKAMRVLRARLYEKAQREQQEE--LAAKRRLQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       VLDG+LD+ ++A +   +
Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTLHKLDAVLDGELDEIIQALIVESQ 347


>gi|116618873|ref|YP_819244.1| peptide chain release factor 1 [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122270927|sp|Q03VA1|RF1_LEUMM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116097720|gb|ABJ62871.1| bacterial peptide chain release factor 1 (bRF-1) [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
          Length = 356

 Score =  216 bits (549), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 95/344 (27%), Positives = 168/344 (48%), Gaps = 8/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               +     LN +  DP +  N      L +E   +   +      +  + D     EL
Sbjct: 8   LQTVIDHYDELNEQLADPEVMNNGQHYMKLSKEAGEIRQTVEVYTRYKQVIQDIQDAEEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E    L+  K ++E + +   L     D  +  +E+   AGG ES  +A
Sbjct: 68  LGDAEMAPLAKEDLSALKPEKEQLEEQLKILMLPKDPNDDKNIIMEIRGAAGGDESSLFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LL MY R+AE++ +    ++    E  G K   ++I G N Y  LK E G HR+ R+ 
Sbjct: 128 ADLLDMYRRYAERQNWSMSIIDESTTEVGGYKEVAVMITGDNVYSKLKFESGAHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P  ++ I+ E++ESD   + +R+ GAGGQ+VN   +AVR+ H
Sbjct: 188 ATETQGRVHTSTATVGVMPEFEE-IDFELNESDLEEEFFRSGGAGGQNVNKVSTAVRLIH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            PTG++V+ Q+ER+Q KN+ +A  +L +++Y+   Q+ E         K+ +G G    +
Sbjct: 247 KPTGIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNESE--YAAQRKSAVGTGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R  +       +++G+L + + A +   +
Sbjct: 305 IRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELGEVIDALVIADQ 347


>gi|94986447|ref|YP_594380.1| peptide chain release factor 1 [Lawsonia intracellularis
           PHE/MN1-00]
 gi|119361555|sp|Q1MSG7|RF1_LAWIP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|94730696|emb|CAJ54058.1| Protein chain release factor A [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 359

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 109/345 (31%), Positives = 178/345 (51%), Gaps = 11/345 (3%)

Query: 13  LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL---CD 68
           +F   +N  Q+   +      P+++ +  + + L +    L   ++  ++ +       +
Sbjct: 1   MFAKLENLEQKFIEIECSLAQPNIFNDQEQYRKLTKTHSDLKPIVTTFQQFKKLQQQLSE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           N  L+     +     L+E       +       +   L     D  +  LE+ AG GG 
Sbjct: 61  NKELISDIDPDIQEMALEEIKKLELELTHLEYELKILLLPKDPLDEKNILLEIRAGTGGE 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY R+AEK  +K E +   D +  G K    LI+G N Y  LK E G H
Sbjct: 121 EAALFAADLFRMYCRYAEKMHWKVEIMSQSDSDTGGFKEIIALIQGDNVYSRLKFESGTH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS +++ V P   + ++IEI   + R D +R+SG GGQ VNTTDS
Sbjct: 181 RVQRVPTTESQGRIHTSAATVAVLP-EAEDVDIEIRPEELRFDVFRSSGPGGQSVNTTDS 239

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+THIPTG+VV CQ E+SQHKNKA+A  +L ++L  L++++ ++     ++ +  +G 
Sbjct: 240 AVRVTHIPTGIVVTCQDEKSQHKNKAKALKVLSSRL--LQIKQEQQEIEQADARRALVGS 297

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G    +IR+Y   P   V D R N+   S   V++G++ +F+ A 
Sbjct: 298 GDRSERIRTYNF-PQGRVTDHRINLTLYSLIKVMEGEIQEFIDAL 341


>gi|83942386|ref|ZP_00954847.1| peptide chain release factor 1 [Sulfitobacter sp. EE-36]
 gi|83846479|gb|EAP84355.1| peptide chain release factor 1 [Sulfitobacter sp. EE-36]
          Length = 351

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 120/341 (35%), Positives = 174/341 (51%), Gaps = 12/341 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                QR  FL           +  +   L +E   L   +  I   +  L D      +
Sbjct: 7   LAQITQRFQFLEASMSAG---SDGADFAKLAKEYADLRPVVEQIDAYRQLLQDMDDARAM 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E    L+    + E   Q   L   EAD   A LE+  G GG E+  +A
Sbjct: 64  LKDPEMAELAEEELPRLKAALPQAEADLQLALLPRDEADKKPAMLEIRPGTGGDEAALFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE R +K E +E    E  G+K     IKG N +  LK E GVHR+ R+ 
Sbjct: 124 ADLLRMYQRYAEARGWKVELIEQQFTELGGVKEVVAHIKGENVFARLKYESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++I I  +D RIDT R+SGAGGQHVNTTDSAVRITH
Sbjct: 184 STESGGRIHTSAATVAVLP-EAEDVDIHIDANDLRIDTMRSSGAGGQHVNTTDSAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV    E+SQH+N+  A  +L+A+LY++E Q+ +   +   +   ++G G    +
Sbjct: 243 LPTGLVVTSS-EKSQHRNREIAMQVLKARLYDMERQRVDSERSASRA--AQVGSGDRSER 299

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       V+ GDLD+ + A  A
Sbjct: 300 IRTYNF-PQGRLTDHRINLTLYRLEAVMQGDLDEIVDALTA 339


>gi|328542097|ref|YP_004302206.1| peptide chain release factor 1 [polymorphum gilvum SL003B-26A1]
 gi|326411847|gb|ADZ68910.1| Peptide chain release factor 1 [Polymorphum gilvum SL003B-26A1]
          Length = 357

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 124/351 (35%), Positives = 183/351 (52%), Gaps = 20/351 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAK--MLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D  + R + +  +        N   A    L RE   L+  ++ ++ ++    +     
Sbjct: 7   LDTLLARFAEIEHRMS-----SNPDAATYVRLSREYSDLEPLVARVRALRRAEAELADAE 61

Query: 74  ELA-----LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
            L        +       E      R++   +  +   L    AD+NDA LEV AG GG 
Sbjct: 62  ALLEDSVGDPDMAELAEAEREALAARVEALTQEVRIGLLPKDSADTNDAILEVRAGTGGD 121

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY R+A+ + +K E L   +GE  G K     + G N +  LK E GVH
Sbjct: 122 EAALFAGDLFRMYQRYADLKGWKVEILSASEGEMGGFKEVIASVSGENVFARLKFESGVH 181

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS +++ V P  +D ++I++ +SD RIDTYRASGAGGQHVNTTDS
Sbjct: 182 RVQRVPETESGGRIHTSAATVAVLPQAED-VDIDVHDSDLRIDTYRASGAGGQHVNTTDS 240

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VV  Q ERSQHKNKA+A  +LRAK+Y+ E +K    +   E+ + ++G 
Sbjct: 241 AVRITHLPTGIVVAVQDERSQHKNKAKAMQLLRAKIYDAEREK--AASERTEARRLQVGS 298

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           G    +IR+Y   P   V D R  +       V+ G+ LD+ + A     +
Sbjct: 299 GDRSERIRTYNF-PQGRVTDHRIGLTLYKLDQVISGEALDEVIDALTMDHQ 348


>gi|269140268|ref|YP_003296969.1| protein chain release factor B [Edwardsiella tarda EIB202]
 gi|267985929|gb|ACY85758.1| protein chain release factor B [Edwardsiella tarda EIB202]
          Length = 289

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 168/288 (58%), Positives = 210/288 (72%), Gaps = 1/288 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + D   LLELA+E DD     E    L  + +++   +F  + SGE DS D YL++ AG+
Sbjct: 1   MEDVSGLLELAVEADDEETFNEAVAELDLLDVKLGQLEFRRMFSGEYDSADCYLDIQAGS 60

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWA+MLLRMY RWAE + FKTE +E  +GE AG+KSAT+ I G  AYGWL+ E 
Sbjct: 61  GGTEAQDWASMLLRMYLRWAESKGFKTEIIEESEGEVAGLKSATIKISGDYAYGWLRTET 120

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN 
Sbjct: 121 GVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNK 180

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++
Sbjct: 181 TESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAERQQMEDTKSD 240

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IGWG QIRSYVL     +KDLRT++E  +   VLDGDLD F++A+L  
Sbjct: 241 IGWGSQIRSYVLDD-SRIKDLRTSVETRNTQAVLDGDLDRFIEASLKA 287


>gi|71275264|ref|ZP_00651551.1| Peptide chain release factor 1 [Xylella fastidiosa Dixon]
 gi|170731262|ref|YP_001776695.1| peptide chain release factor 1 [Xylella fastidiosa M12]
 gi|238687964|sp|B0U5Z3|RF1_XYLFM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71164073|gb|EAO13788.1| Peptide chain release factor 1 [Xylella fastidiosa Dixon]
 gi|167966055|gb|ACA13065.1| peptide chain release factor 1 [Xylella fastidiosa M12]
          Length = 361

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 109/340 (32%), Positives = 173/340 (50%), Gaps = 8/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L     DP +  +    +   RE   L    + + E      D      L
Sbjct: 9   LEALAERHEELERLLSDPKIASDTDRFRTYSRELAQLAPIATTLAEETRTKADLAAAETL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + ++     Q     ++ + Q   +     D  + +LEV AG GG E+  +A
Sbjct: 69  RTDPEMRELAEQEIAIAQAHLTTLDEQLQRLLIPQDPRDECNLFLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+AE++++K E      GE  G K     I G  AY  LK E G HR+ R+ 
Sbjct: 129 GNLFRMYTRYAERQRWKVEVESDTPGEHGGYKEIIARIVGRGAYSRLKFESGTHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ + P  D+  +I I+ +D +IDT+R+SGAGGQHVN T+SA+RITH
Sbjct: 189 ATESQGRIHTSAATVAIIPEADEIADISINPADLKIDTFRSSGAGGQHVNKTESAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311
           +PTGVVV+ Q ERSQH N+ +A   L+A+L  +E ++ ++      + K ++G G    +
Sbjct: 249 LPTGVVVESQTERSQHANRDKAMKRLKAQL--IESERSQQATAEAMTRKLQVGSGDRSQR 306

Query: 312 IRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   + D R  N+      ++++GDLD  +   
Sbjct: 307 IRTYNF-PQGRITDHRVENLTLYDLPNIIEGDLDPLIDRL 345


>gi|313681233|ref|YP_004058971.1| bacterial peptide chain release factor 1 (brf-1) [Sulfuricurvum
           kujiense DSM 16994]
 gi|313154093|gb|ADR32771.1| bacterial peptide chain release factor 1 (bRF-1) [Sulfuricurvum
           kujiense DSM 16994]
          Length = 355

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 107/338 (31%), Positives = 174/338 (51%), Gaps = 9/338 (2%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           + R + L      P +  ++     L +E+  +   ++   E +  L D      LA + 
Sbjct: 10  INRYNELTELLSSPDIGNDIKRMTELSKEQSSIQAIVNKATEYKKLLEDIEENKSLAFDA 69

Query: 80  DDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +   + +E    L+ +     E  +   + +   D  + Y+E+ AG GG E+  +   L 
Sbjct: 70  ELGELAKEELRTLEPMVEPLEEEIKKLLIPADPNDKRNIYIELRAGTGGDEAAIFVGDLF 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
             Y R+A+ + +K E +     +  G K    LIKG   Y  LK E G HR+ R+   +S
Sbjct: 130 NAYVRYADVKGWKIELMSSSPSDAGGYKEIIALIKGEQVYSRLKYEAGTHRVQRVPATES 189

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS  ++ V P   D +E+ I+E+D +ID  R+SG+GGQ VNTTDSAVRITH+PTG
Sbjct: 190 QGRVHTSAITVAVMP-EVDDVEVTINENDLKIDVMRSSGSGGQSVNTTDSAVRITHLPTG 248

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSY 315
           +VV  Q E+SQHKNK +A  +L+A++YE++++  E         K ++G G    +IR+Y
Sbjct: 249 IVVTNQDEKSQHKNKDKAMKILKARIYEMQME--EAKVKEMSERKEQVGTGDRSGRIRTY 306

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLA 352
              P   + D R N+      +++ G L DD ++  +A
Sbjct: 307 NY-PQNRISDHRINLTLYRLDEIMQGGLMDDIIEPLIA 343


>gi|237738152|ref|ZP_04568633.1| peptide chain release factor 2 [Fusobacterium mortiferum ATCC 9817]
 gi|229420032|gb|EEO35079.1| peptide chain release factor 2 [Fusobacterium mortiferum ATCC 9817]
          Length = 308

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 151/303 (49%), Positives = 206/303 (67%), Gaps = 1/303 (0%)

Query: 53  DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112
              ++  K +   L +  +L+E   + +     +E  +    +  +VE+     LL GE 
Sbjct: 5   KELVAEFKNLVAELENEEVLIEFVEQGET-DFQEELEEKHIILGKDVEHFDTRLLLDGEY 63

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           DSN+A + +H+GAGGTE+ DWA+ML RMY+RW   +K+K   ++   G+  GIKS T ++
Sbjct: 64  DSNNAIVTIHSGAGGTEACDWADMLYRMYSRWCSDKKYKISEMDFMPGDSVGIKSITFMV 123

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G NA+G+LK E+GVHRLVRISP+D+N +RHTSF+S+ V P VDDSIE+ I  SD RIDT
Sbjct: 124 EGMNAFGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDDSIEVNIDPSDIRIDT 183

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN TDSAVRITH PTG+VV CQ+ERSQ  N+  A  +L++KL ELE++K+
Sbjct: 184 YRASGAGGQHVNMTDSAVRITHFPTGIVVTCQRERSQLSNRETAMKLLKSKLIELEMKKK 243

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           EE     +  +++IGWG QIRSYV QPY +VKD RTN E  +   V+DGD+D F+   L 
Sbjct: 244 EEELKKLQGEQSDIGWGNQIRSYVFQPYTLVKDHRTNCESGNIKAVMDGDIDIFINGYLR 303

Query: 353 IKK 355
             K
Sbjct: 304 WNK 306


>gi|238855957|ref|ZP_04646243.1| peptide chain release factor 1 [Lactobacillus jensenii 269-3]
 gi|260664674|ref|ZP_05865526.1| peptide chain release factor 1 [Lactobacillus jensenii SJ-7A-US]
 gi|282934364|ref|ZP_06339631.1| peptide chain release factor 1 [Lactobacillus jensenii 208-1]
 gi|313471876|ref|ZP_07812368.1| peptide chain release factor 1 [Lactobacillus jensenii 1153]
 gi|238831430|gb|EEQ23781.1| peptide chain release factor 1 [Lactobacillus jensenii 269-3]
 gi|239529209|gb|EEQ68210.1| peptide chain release factor 1 [Lactobacillus jensenii 1153]
 gi|260561739|gb|EEX27711.1| peptide chain release factor 1 [Lactobacillus jensenii SJ-7A-US]
 gi|281301574|gb|EFA93851.1| peptide chain release factor 1 [Lactobacillus jensenii 208-1]
          Length = 362

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 100/343 (29%), Positives = 171/343 (49%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   +     DP +  +      + +E   +   +   ++ Q+         E+
Sbjct: 8   LEGLVARYEEIQELMADPEVINDTKRYMEISKEEADMREVVQKYRKYQEDQKTISDNKEI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++   +    ++ EV   +       L     D  D  +E+   AGG E+ 
Sbjct: 68  IESESDADLVEMAKEENSDLEKEVADLEEEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE + +K   ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAETQGWKISVIDEETTEVGGYKHVAIMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + ++I++   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMP-EYEQVDIDLDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q +RSQ +N+A+A  +L++++Y+    + +  A+  E  K  +G G  
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQNQ--ASYDEKRKNAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R  +       +++G+LD+ + A +
Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIISALI 346


>gi|332381658|gb|AEE66505.1| peptide chain release factor 2 [Bordetella pertussis CS]
          Length = 293

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 154/290 (53%), Positives = 215/290 (74%), Gaps = 1/290 (0%)

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D+  L+ELAL + D + L+    +  R + ++E  +F  + +  AD  + ++++ A
Sbjct: 3   SGLADSCELVELALADSDDATLEAIEHDADRFQEKLETLEFRRMFANPADPLNCFVDIQA 62

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           GAGGTE+QDWA+MLLR Y ++AE++ FK E LE  +G+ AG+KSAT+ I+G  A+G+L+ 
Sbjct: 63  GAGGTEAQDWASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFGYLRT 122

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS+  RHTSF+S++VYP VD+S E+E++ +D RIDTYRASGAGGQH+
Sbjct: 123 ETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRIDTYRASGAGGQHI 182

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N TDSAVRITH P+G+VVQCQ +RSQH+N+A+A  ML++KLYELE++ R       E SK
Sbjct: 183 NKTDSAVRITHAPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMTEQQKLEDSK 242

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           T++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F++A+L  
Sbjct: 243 TDVGWGHQIRSYVLD-QSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQ 291


>gi|170718675|ref|YP_001783869.1| peptide chain release factor 2 [Haemophilus somnus 2336]
 gi|168826804|gb|ACA32175.1| peptide chain release factor 2 [Haemophilus somnus 2336]
          Length = 289

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 157/288 (54%), Positives = 209/288 (72%), Gaps = 1/288 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + D   LLEL++E +D +   E     + ++ ++   +F  + SG+ D+ D Y+++ AG+
Sbjct: 1   MEDVDGLLELSVEAEDETTFNEAVAEAEELEKKLATLEFRRMFSGQHDNCDCYVDLQAGS 60

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDW  MLLRMY RWAE + FKTE +E+  G+ AG+KSAT+ I G  A+GWL+ E 
Sbjct: 61  GGTEAQDWTEMLLRMYLRWAESKGFKTELVEVSSGDVAGLKSATIRIAGEYAFGWLRTET 120

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G+HRLVR SP+DSN+RRHTSF++ +VYP +DD IEIEI+ +D RID YRASGAGGQHVN 
Sbjct: 121 GIHRLVRKSPFDSNNRRHTSFAAAFVYPEIDDDIEIEINPADLRIDVYRASGAGGQHVNK 180

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVRITHIP+G+VVQCQ  RSQH+NK QA   L+AKLYE+E+ K+       E SK++
Sbjct: 181 TESAVRITHIPSGIVVQCQNGRSQHQNKDQAMKQLKAKLYEMEMMKKNADKQAMEDSKSD 240

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 241 IGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 287


>gi|313888275|ref|ZP_07821946.1| peptide chain release factor 1 [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845678|gb|EFR33068.1| peptide chain release factor 1 [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 355

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 110/343 (32%), Positives = 175/343 (51%), Gaps = 11/343 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
             +L  L        +  +    +    E   ++  ++  +  ++ L       EL  E+
Sbjct: 9   EDKLIELEKDLSSVEVINDSKLYQQKAIEHAEIEPIVTKYRAYKETLNSLNENKELIKEK 68

Query: 80  DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
            D        + +     +VE  +       +   + DS +  +E+ AGAGG E+  +A 
Sbjct: 69  LDDDFKDLVREEINEATKKVEELENELKILLIPKDKNDSKNVMVEIRAGAGGDEAALFAG 128

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
           +L R Y R+AE+  F+ E +  ++    G K    +I G  AY  LK E GVHR+ R+  
Sbjct: 129 VLYRQYVRYAERSGFRVETISSNEIGIGGYKEIVFMIIGNGAYSRLKYESGVHRVQRVPE 188

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS +++ V P   + ++IEI  +  + D +RASG GGQ VNTTDSAVR+THI
Sbjct: 189 TESGGRIHTSTATVAVLP-EAEDVDIEIDPTQIKFDVFRASGNGGQCVNTTDSAVRLTHI 247

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTG+V+ CQ E+SQ +NK +A  +LR+KLY+L+LQ++ E         ++IG G    +I
Sbjct: 248 PTGIVISCQDEKSQLRNKEKAMKLLRSKLYDLKLQEQSE--KESMERSSQIGTGDRSERI 305

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R+Y   P   V D R N+       + DGDLD+ + A +   +
Sbjct: 306 RTYNY-PQGRVTDHRINLTSHRIDAINDGDLDEIIDALITYDQ 347


>gi|256830555|ref|YP_003159283.1| peptide chain release factor 1 [Desulfomicrobium baculatum DSM
           4028]
 gi|256579731|gb|ACU90867.1| peptide chain release factor 1 [Desulfomicrobium baculatum DSM
           4028]
          Length = 353

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 102/341 (29%), Positives = 171/341 (50%), Gaps = 10/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   +   L  +   P ++Q+    + + ++   LD  +   +  +  L +     EL
Sbjct: 5   LESLAAKYRELEREMSTPEIFQDQERYRKIAKKHAELDEIVKAFELYKTLLREMAENQEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS---NDAYLEVHAGAGGTESQD 132
           A + D        ++ +       E ++    L    D     +  LE+ AG GG E+  
Sbjct: 65  AKDSDPELCEMAQAEIVLLKAAIGEQEKVLKQLLTPKDPLDEKNIILEIRAGTGGEEAAL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +   + RMY+R+AE   ++ E L   D    G K     + G N Y  LK E G HR+ R
Sbjct: 125 FVADIFRMYSRYAELHSWRVEVLSSSDTGTGGFKEIIASVSGTNVYSKLKYESGAHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ + P   + ++++I  +D R+D +R+SG GGQ VNTTDSA+RI
Sbjct: 185 VPATESQGRIHTSAITVAILP-EAEEVDVKIDPNDIRVDVFRSSGPGGQSVNTTDSAIRI 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+ TG+VV CQ E+SQHKNKA+A  +LR++L  L+  + E      ++ K+++G G   
Sbjct: 244 THLATGLVVICQDEKSQHKNKAKALKVLRSRL--LQAAQDETKKAYDDNRKSQVGSGDRS 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            +IR+Y   P   V D R N+   +    ++G +DD +   
Sbjct: 302 ERIRTYNY-PQGRVTDHRINLTLYNLDQAMEGHIDDIIDGL 341


>gi|227328400|ref|ZP_03832424.1| peptide chain release factor 2 [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 248

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 153/247 (61%), Positives = 187/247 (75%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ DS D YL++ AG+GGTE+QDWA+ML+RMY RWAE + FKTE +E  DG+ AG K
Sbjct: 1   MFSGQYDSADCYLDIQAGSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +
Sbjct: 61  SATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E+QK+       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F
Sbjct: 181 FEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKF 239

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 240 IEASLKA 246


>gi|91762141|ref|ZP_01264106.1| bacterial peptide chain release factor 2 (RF-2) [Candidatus
           Pelagibacter ubique HTCC1002]
 gi|91717943|gb|EAS84593.1| bacterial peptide chain release factor 2 (RF-2) [Candidatus
           Pelagibacter ubique HTCC1002]
          Length = 284

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 169/280 (60%), Positives = 225/280 (80%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           + ELALEE + S++ E  ++++ +K   +  + +  LS E DS + Y+E+HAGAGGTESQ
Sbjct: 1   MNELALEEKNQSVINEVLESIKNLKKLAKKNETKCFLSNETDSLNCYIEIHAGAGGTESQ 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA ML RMY +W++ + FK+E +  H GEEAGIKS+T+ I+G   +GWLK E G+HRLV
Sbjct: 61  DWAEMLRRMYLKWSDIKNFKSELISEHKGEEAGIKSSTIKIEGDYVFGWLKAESGIHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RISP+DS +RRHTSF+SIW+YPV+D++IEIEI+E D RIDTYR+SGAGGQHVNTTDSAVR
Sbjct: 121 RISPFDSGARRHTSFASIWIYPVIDENIEIEINEKDLRIDTYRSSGAGGQHVNTTDSAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+P+ +VVQCQ ERSQHKNK    NML+A+LY+ EL+K+E+ +   ESSK+EIGWG Q
Sbjct: 181 ITHLPSKIVVQCQNERSQHKNKDTCMNMLKARLYDFELKKKEQESQTVESSKSEIGWGHQ 240

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVL PY+MVKD RTN E ++P  +LDG++DDF++++L
Sbjct: 241 IRSYVLHPYRMVKDNRTNFESSNPDKILDGEIDDFLESSL 280


>gi|239944287|ref|ZP_04696224.1| peptide chain release factor 1 [Streptomyces roseosporus NRRL
           15998]
 gi|239990742|ref|ZP_04711406.1| peptide chain release factor 1 [Streptomyces roseosporus NRRL
           11379]
 gi|291447755|ref|ZP_06587145.1| peptide chain release factor 1 [Streptomyces roseosporus NRRL
           15998]
 gi|291350702|gb|EFE77606.1| peptide chain release factor 1 [Streptomyces roseosporus NRRL
           15998]
          Length = 358

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 114/354 (32%), Positives = 176/354 (49%), Gaps = 16/354 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +  +   + L  K  DP +  +   A+ L +    L   +S  +  +    D   
Sbjct: 1   MFEAVEELIGEHTDLEKKLADPSVHADQANARKLNKRYAELTPIVSTYRAWKQTGDDIET 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E     DD     E  +  ++ +   E  +   +    +D  D  LE+ AGAGG ES 
Sbjct: 61  AREF--AADDPDFAAEVKELEKQREEITEKLRLLLVPRDPSDDKDVLLEIKAGAGGDESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG----------PNAYGWL 181
            +A  LLRMY R+AE+  +KTE ++  + E  G K   + +K              +  +
Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVAVKTKGGNGATEPGQGVWARM 178

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   +S  R HTS + + V P   + +++EI  +D RID YR+SG GGQ
Sbjct: 179 KYEGGVHRVQRVPSTESQGRIHTSAAGVLVTP-EAEEVDVEIHANDLRIDVYRSSGPGGQ 237

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR++L     +  E+ A+    
Sbjct: 238 SVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEAAEQEASDVRR 297

Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           S+   +    +IR+Y   P   + D R   +  +   VLDG+LD  ++A +   
Sbjct: 298 SQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGELDAVIQACVDAD 350


>gi|83953606|ref|ZP_00962327.1| peptide chain release factor 1 [Sulfitobacter sp. NAS-14.1]
 gi|83841551|gb|EAP80720.1| peptide chain release factor 1 [Sulfitobacter sp. NAS-14.1]
          Length = 351

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 120/341 (35%), Positives = 174/341 (51%), Gaps = 12/341 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                QR  FL           +  +   L +E   L   +  I   +  L D      +
Sbjct: 7   LAQITQRFQFLEASMSAG---SDGADFAKLAKEYADLRPVVEQIDAYRQLLQDMDDARAM 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E    L+    + E   Q   L   EAD   A LE+  G GG E+  +A
Sbjct: 64  LKDTEMAELAEEELPRLKAALPQAEADLQLALLPRDEADKKPAMLEIRPGTGGDEAALFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE R +K E +E    E  G+K     IKG N +  LK E GVHR+ R+ 
Sbjct: 124 ADLLRMYQRYAEARGWKFELIEQQFTELGGVKEVVAHIKGENVFARLKYESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++I I  +D RIDT R+SGAGGQHVNTTDSAVRITH
Sbjct: 184 STESGGRIHTSAATVAVLP-EAEDVDIHIDANDLRIDTMRSSGAGGQHVNTTDSAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV    E+SQH+N+  A  +L+A+LY++E Q+ +   +   +   ++G G    +
Sbjct: 243 LPTGLVVTSS-EKSQHRNREIAMQVLKARLYDMERQRVDSERSASRA--AQVGSGDRSER 299

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       V+ GDLD+ + A  A
Sbjct: 300 IRTYNF-PQGRLTDHRINLTLYRLEAVMQGDLDEIVDALTA 339


>gi|265996886|ref|ZP_06109443.1| peptide chain release factor 1 [Brucella ceti M490/95/1]
 gi|262551354|gb|EEZ07344.1| peptide chain release factor 1 [Brucella ceti M490/95/1]
          Length = 372

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 116/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 23  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 78

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  +        +      +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 79  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 138

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 139 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSTLKFESGVHRV 198

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 199 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 257

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK    +   ++ ++++G G 
Sbjct: 258 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 314

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V++GDLD+ + A ++  +
Sbjct: 315 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQ 361


>gi|154705875|ref|YP_001424983.1| peptide chain release factor 2 [Coxiella burnetii Dugway 5J108-111]
 gi|154355161|gb|ABS76623.1| bacterial peptide chain release factor 2 (RF-2) [Coxiella burnetii
           Dugway 5J108-111]
          Length = 289

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 159/282 (56%), Positives = 211/282 (74%), Gaps = 1/282 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           + +L+ +E +  ++ + + + ++++  +   +F+ + SGE DSN+AYL++ AG+GGTE+Q
Sbjct: 1   MAQLSKQEKETDLITDLNKDFKQLEKTIAEMEFQRMFSGEMDSNNAYLDIQAGSGGTEAQ 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA MLLRMY RW +K  F T  +E   GE AGIKSAT+   G  AYGWL+ E GVHRLV
Sbjct: 61  DWAEMLLRMYLRWGDKHGFTTTLMEASPGEVAGIKSATIEFTGSYAYGWLRSETGVHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS +RRHTSF+S++V P +DD IEIEI+ ++ RIDTYRASGAGGQHVN TDSAVR
Sbjct: 121 RKSPFDSGNRRHTSFASVFVSPEIDDDIEIEINPAELRIDTYRASGAGGQHVNRTDSAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+P+G+VVQCQ +RSQHKNKAQA   LRAKLYE+E+ K++E   + E SK+EI WG Q
Sbjct: 181 ITHLPSGIVVQCQNDRSQHKNKAQAMKQLRAKLYEMEMMKQQEKQALLEVSKSEISWGNQ 240

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IRSYVL     VKDLRT +E ++   VLDGD+D F++A L  
Sbjct: 241 IRSYVLD-ASRVKDLRTGVETSNTQAVLDGDIDLFIEACLKQ 281


>gi|126736399|ref|ZP_01752141.1| peptide chain release factor 1 [Roseobacter sp. CCS2]
 gi|126714220|gb|EBA11089.1| peptide chain release factor 1 [Roseobacter sp. CCS2]
          Length = 351

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 114/341 (33%), Positives = 174/341 (51%), Gaps = 12/341 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  + R  FL  K  D        E   L +E   L   +  +   +D +        +
Sbjct: 7   IEQLIDRFQFLEAKMADGSAGN---EIAALGKEYADLRPVVETVTAYKDLVQQIDEAEAM 63

Query: 76  ALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +    +L+          Q   L    AD+  A LE+  G GG E+  +A
Sbjct: 64  LADPEMKELAEAELPDLKAALAASEHDVQLALLPKDAADARPALLEIRPGTGGDEAGLFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE + ++ E LE    E  G+K     I G   +  +K E GVHR+ R+ 
Sbjct: 124 ADLLRMYQRYAEGQGWRFEILEESLSELGGVKEVVARIVGDGVFAKMKYESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++IEI+ +D RIDT RASG+GGQHVNTTDSAVRI H
Sbjct: 184 ETESGGRIHTSAATVAVLP-EAEDVDIEINANDLRIDTMRASGSGGQHVNTTDSAVRILH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG++V    E+SQH+N+  A  +L+ +L++LE QK ++        K ++G G    +
Sbjct: 243 IPTGMIV-VSSEKSQHRNREIAMQVLKTRLFDLERQKVDDER--SADRKAQVGSGDRSER 299

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+   S + V+ GDL++ + A  A
Sbjct: 300 IRTYNF-PQGRMTDHRINLTLYSLNQVMQGDLEEIVNALQA 339


>gi|258544156|ref|ZP_05704390.1| peptide chain release factor 2 [Cardiobacterium hominis ATCC 15826]
 gi|258520598|gb|EEV89457.1| peptide chain release factor 2 [Cardiobacterium hominis ATCC 15826]
          Length = 250

 Score =  215 bits (547), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 149/247 (60%), Positives = 186/247 (75%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE D N+A+L++ AG+GGTE+QDWA+MLLRMY RW E R FKTE +E   G+ AGIK
Sbjct: 1   MFSGELDPNNAFLDIQAGSGGTEAQDWASMLLRMYLRWGEARGFKTELIEESPGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+   G  AYGWL+ E GVHRLVR SP+DS +RRHTSF++++V P +DD+IEIEI+ +
Sbjct: 61  SATIEFTGEYAYGWLRTEIGVHRLVRKSPFDSGNRRHTSFAAVFVSPEIDDNIEIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R+D YRASGAGGQHVN T+SAVRITH+PT +VVQ Q  RSQH+N++     LRAKLYE
Sbjct: 121 DLRVDVYRASGAGGQHVNRTESAVRITHLPTNIVVQSQNSRSQHENRSTCMKQLRAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LEL KR   A   E SK++IGWG QIRSYVL     +KDLRT  E ++   VLDG LD F
Sbjct: 181 LELSKRSASAQAIEDSKSDIGWGNQIRSYVLD-QSRIKDLRTGYETSNTQAVLDGGLDPF 239

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 240 LQASLKQ 246


>gi|218296205|ref|ZP_03496961.1| peptide chain release factor 1 [Thermus aquaticus Y51MC23]
 gi|218243277|gb|EED09807.1| peptide chain release factor 1 [Thermus aquaticus Y51MC23]
          Length = 354

 Score =  215 bits (547), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 109/329 (33%), Positives = 170/329 (51%), Gaps = 8/329 (2%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI-LQETS 89
            DP + ++    + L R    +   I+ I+E +  L D   +  L  + +   +   E  
Sbjct: 20  ADPEVLKDQKRYQALSRRYAEMGEIIALIREYRKVLEDLEGVESLLEDPELREVAKAEKE 79

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L R +   +  +   L     D  DA +E+ AG GG E+  +A  LL MY R+AE+  
Sbjct: 80  ALLARKEALEKELERHLLPKDPMDERDAIVEIRAGTGGEEAALFARDLLEMYLRFAEEMG 139

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+TE L+ +  +  G       ++GP AYG  K E GVHR+ R+   ++  R HTS +++
Sbjct: 140 FETEILDSNPTDLGGFSKVVFEVRGPGAYGTFKYESGVHRVQRVPATETQGRIHTSTATV 199

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  ++S   +++  + RID  RASG GGQ VNTTDSAVR+ H+PTG++V CQ  RSQ
Sbjct: 200 AVLPKAEESD-FQLNMDEVRIDVMRASGPGGQGVNTTDSAVRVVHLPTGIMVTCQDSRSQ 258

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDL 326
            KN+ +A  +LR++L  LE+++ EE   + ++   +IG G +   IR+Y   P   V D 
Sbjct: 259 IKNREKALMILRSRL--LEMKRAEEAEKLRQARLAQIGTGERSEKIRTYNF-PQSRVTDH 315

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R          VL G L   ++A     +
Sbjct: 316 RIGFTTHDLEGVLSGKLQPLLEALKRADQ 344


>gi|313885157|ref|ZP_07818909.1| peptide chain release factor 1 [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312619848|gb|EFR31285.1| peptide chain release factor 1 [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 359

 Score =  215 bits (547), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 114/351 (32%), Positives = 175/351 (49%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  D+ + R   +N    DP +  +    + L  E   L   +  I+  ++   +   
Sbjct: 1   MFEQLDSLLIRYDEVNELLSDPIVIADSNRLRELTIEEADLRPKVEKIRRYKEVEAEIED 60

Query: 72  LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +  EE D  IL    +         +   E  +   L     D  +  +E+   AGG
Sbjct: 61  TEAMLSEESDDDILAMAKEELASLKAENEQLQEDIKLLMLPEDPNDGKNIIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+Q +A  LL MYT++A+K+ +KTE L+ +     G K  TL+I G   Y  LK E G 
Sbjct: 121 DEAQLFAGDLLNMYTKYADKQGWKTEVLDANITGIGGYKEVTLMITGNKVYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + I+ E+ E+D R+D Y ASGAGGQHVN T 
Sbjct: 181 HRVQRVPQTESQGRVHTSTATVVVMP-EAEEIDFELDENDIRVDIYHASGAGGQHVNKTA 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPT  VV  Q ERSQ KN+ +A  +LRA++Y+    + +  +      K ++G
Sbjct: 240 SAVRLTHIPTNTVVAMQDERSQIKNREKAMKILRARVYD--QVRSQAQSEYDSERKLKVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       VL G+LD+ + A +   +
Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTLQQLDSVLSGNLDEIIDALVLYDQ 347


>gi|302334925|ref|YP_003800132.1| bacterial peptide chain release factor 1 (bRF-1) [Olsenella uli DSM
           7084]
 gi|301318765|gb|ADK67252.1| bacterial peptide chain release factor 1 (bRF-1) [Olsenella uli DSM
           7084]
          Length = 355

 Score =  215 bits (547), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 117/349 (33%), Positives = 173/349 (49%), Gaps = 15/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +     L  +  DP +  +  E   + +E       ++  +E    L D  +  E+
Sbjct: 5   LEKLIAAYEELEKRMVDPTVVSDPKEYARIAKEHASQAELVAKAREYVGALDDIEVAKEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
             E  D S  +   +++   + ++   + E           D  +  +E+ AG GG E+ 
Sbjct: 65  QRETSDASEKEMLQEDIGANEAKLPALEDEIKVMLIPGDPNDEKNTIVEIRAGVGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY R+A   K+KTE L     E  G K+    + G   +  +K E GVHR+ 
Sbjct: 125 IFAGDLYNMYARFASTHKWKTEVLSSSPSEAGGFKTIEFKVTGDKVFSVMKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R  TS +++ V P   D I+IEI + D RIDTY ASG GGQ VNTT SAVR
Sbjct: 185 RIPKTESQGRIQTSTATVAVLP-EADEIDIEIKDEDLRIDTYCASGPGGQCVNTTYSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PT  VVQ Q +RSQ +N+A    MLRA+LYE+EL+K++     G +   +IG G  
Sbjct: 244 ITHLPTNTVVQSQDQRSQIQNRAVCMEMLRARLYEVELEKQQAEQ--GAARLGQIGHGSR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNI-EKTSPSDVLDGD-LDDFMKATLAIKK 355
             +IR+Y  QP   V D R       +   VL GD L + + A  A ++
Sbjct: 302 AEKIRTYN-QPQDRVTDHRIGFNSTYN--GVLLGDRLPEVIDALAAAER 347


>gi|254419936|ref|ZP_05033660.1| peptide chain release factor 1 [Brevundimonas sp. BAL3]
 gi|196186113|gb|EDX81089.1| peptide chain release factor 1 [Brevundimonas sp. BAL3]
          Length = 355

 Score =  215 bits (547), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 110/344 (31%), Positives = 173/344 (50%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   +  +        + +E   L +E   L      ++ +     +   L  +
Sbjct: 8   LDQVLDRFHEVEARMGAAT---DGVEIVRLSKEHAELKPVADAVQGLARLRAEMADLEVM 64

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           A + +  ++ Q+   +L                     ++  A LEV AG GG E+  +A
Sbjct: 65  AADPEMAAMAQDELRDLTERLPQMERDVALLLAPRDADENASAVLEVRAGTGGDEAALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+A  R ++ E     +G+  G K     + G   +G LK E GVHR+ R+ 
Sbjct: 125 GDLFRMYSRYAATRGWRIELDSATEGDAGGYKEIIATVTGDGVFGRLKFESGVHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P   + +EIEI E D RIDT+RASG+GGQHVN TDSAVRITH
Sbjct: 185 TTEAGGRIHTSAATVAVLP-EVEDVEIEILEKDIRIDTFRASGSGGQHVNKTDSAVRITH 243

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+V     E+SQH N+ +A   LR +LY+  +Q++ +     +S K+++G G    +
Sbjct: 244 LPTGIVATSS-EKSQHVNRDKAMKNLRVRLYD--MQRQAKDLARADSRKSQVGSGDRSER 300

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R  +   S   +L+GDLD  + A +A  +
Sbjct: 301 IRTYNF-PQGRVTDHRIGLTLHSLPQILEGDLDPMLNALIAEDQ 343


>gi|312897943|ref|ZP_07757356.1| peptide chain release factor 1 [Megasphaera micronuciformis F0359]
 gi|310620977|gb|EFQ04524.1| peptide chain release factor 1 [Megasphaera micronuciformis F0359]
          Length = 361

 Score =  215 bits (547), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 107/348 (30%), Positives = 186/348 (53%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
                 +   L  +  DP +     E + L +E   L   I   ++ +D    + D+  +
Sbjct: 6   VQAVENKFIDLEQRISDPSVIARQDEWQKLTKEHASLAPIIETFRKYKDVSATIADDKEI 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +    + +  ++ +E    L + +  +E +     L     D  +  +E+  GAGG E+ 
Sbjct: 66  IADGSDAELTAMAKEELSELTKEQEALEEELHVLMLPKDPNDDKNVIMEIRGGAGGDEAA 125

Query: 132 DWANMLLRMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            +A  L RMY+++ E ++ +K   +  +  E  G K     ++G   YG LK E GVHR+
Sbjct: 126 IFAGDLFRMYSKYIEKQKGWKASIISSNAPELGGYKEVIFSVEGDGVYGKLKYESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +EI ++  D R+D +RASGAGGQHVN T SAV
Sbjct: 186 QRVPVTESGGRIHTSTATVAVLP-EAEDVEINLNMEDVRVDYFRASGAGGQHVNKTSSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+THIP+G+VV+CQ ERSQ +N+A+A  +L+A+L  L   + E  A + E+ ++++G G 
Sbjct: 245 RMTHIPSGIVVECQDERSQLENRAKAVRVLKARL--LAQAEEEANAEVTEARRSQVGTGD 302

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              ++R+Y   P   V D R N+      ++++GD+D+F++A    ++
Sbjct: 303 RSERVRTYNY-PQGRVTDHRINLTLYKLENIMNGDIDEFIQALAEARR 349


>gi|304311492|ref|YP_003811090.1| peptide chain release factor 1 [gamma proteobacterium HdN1]
 gi|301797225|emb|CBL45445.1| peptide chain release factor 1 [gamma proteobacterium HdN1]
          Length = 362

 Score =  215 bits (547), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 106/341 (31%), Positives = 176/341 (51%), Gaps = 9/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   +     +  +  +  + + L +E   L+  ++   + +  L D  +  +L
Sbjct: 9   LESIAERHEEVAALLSEGSVISDQNQFRKLSQEYAELEPVVTCFADYRKVLADITLARQL 68

Query: 76  ALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +      +        Q   L     D  + YLE+ AG GG E+  
Sbjct: 69  MEDSDPEMREMGAEELRTGQAQRDQFELDLQKLMLPKDPNDGRNVYLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AE   ++ E +  H+GE  G K     + G + Y  LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRYAESCGWRVEVISEHEGEHGGYKEIISRVSGDSVYSKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P  D+  +I+I   D ++DTYR++GAGGQHVNTTDSAVR+
Sbjct: 189 VPVTEAQGRIHTSACTVAVLPEADEIGDIDIRPEDLKMDTYRSTGAGGQHVNTTDSAVRL 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG VV+CQ+ERSQHKN+A+A  +LRA+L         +     E+ +  +G G   
Sbjct: 249 THLPTGTVVECQEERSQHKNRAKALALLRARLLSNAQD--AQTRQTSEARRQLVGSGDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            +IR+Y   P   + D R N+     +++++GDL + +++ 
Sbjct: 307 ERIRTYNF-PQGRLTDHRINLTLYRLNEIVEGDLSEVVQSL 346


>gi|163788169|ref|ZP_02182615.1| peptide chain release factor RF-2 [Flavobacteriales bacterium
           ALC-1]
 gi|159876489|gb|EDP70547.1| peptide chain release factor RF-2 [Flavobacteriales bacterium
           ALC-1]
          Length = 315

 Score =  215 bits (547), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 142/308 (46%), Positives = 208/308 (67%), Gaps = 2/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+  +   + ++     Q    D  ++ E   E++      E         +  E  +F+
Sbjct: 1   MKSIREKKSWVNDYNAAQTLYEDLEVIYEFYKEDEAPMENVENRFEKAVNAI--EKLEFK 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LS E DS  A L++ AGAGGTES DWA+ML+RMY  +AEK  FK + L   +G+ AGI
Sbjct: 59  NMLSEEGDSLSAVLQITAGAGGTESCDWASMLMRMYLMYAEKSGFKVKELNHQEGDVAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ TL I+G  A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDSIEIEI+ 
Sbjct: 119 KTVTLEIEGEYAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIEINP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D  I T R+SGAGGQ+VN  ++ V++ H P+G+ +QC + RSQH N+ +A  ML+++LY
Sbjct: 179 ADIEITTARSSGAGGQNVNKVETKVQLHHKPSGIQIQCSETRSQHDNRTRAMQMLKSQLY 238

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+ELQK+    +  E+ K +I WG QIR+YV+ PY++VKD+R+  E  +   V+DGD++ 
Sbjct: 239 EIELQKQMAQRDDIEAGKMKIEWGSQIRNYVMHPYKLVKDVRSAHETGNVDAVMDGDIEP 298

Query: 346 FMKATLAI 353
           F+KA L +
Sbjct: 299 FLKAYLMM 306


>gi|21223720|ref|NP_629499.1| peptide chain release factor 1 [Streptomyces coelicolor A3(2)]
 gi|256785187|ref|ZP_05523618.1| peptide chain release factor 1 [Streptomyces lividans TK24]
 gi|289769080|ref|ZP_06528458.1| peptide chain release factor 1 [Streptomyces lividans TK24]
 gi|20139352|sp|Q9K4E4|RF1_STRCO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|8568782|emb|CAB94531.1| peptide chain release factor 1 (RF-1) [Streptomyces coelicolor
           A3(2)]
 gi|289699279|gb|EFD66708.1| peptide chain release factor 1 [Streptomyces lividans TK24]
          Length = 358

 Score =  215 bits (547), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 118/350 (33%), Positives = 175/350 (50%), Gaps = 16/350 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +  V   + L  K  DP +  +   A+ L +    L   ++  +  +    D   
Sbjct: 1   MFEAVEELVAEHADLEKKLADPSVHSDQANARKLNKRYAELTPIVATFRSWKQTGDDMET 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E     DD     E  +  ++     E  +   +    +D  D  LE+ AGAGG ES 
Sbjct: 61  AREF--AADDPDFAAEVKELDKQRDELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG----------PNAYGWL 181
            +A  LLRMY R+AE+  +KTE ++  + E  G K   + +K              +  L
Sbjct: 119 LFAGDLLRMYLRYAERIGWKTEIIDSTESELGGYKDVQVAVKTKGGQGATEPGQGVWARL 178

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   +S  R HTS + + V P   + I++EI+ +D RID YR+SG GGQ
Sbjct: 179 KYEGGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEIDVEINPNDLRIDVYRSSGPGGQ 237

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITHIPTGVV  CQ E+SQ +NK QA  +LR++L     ++ E+ A     
Sbjct: 238 SVNTTDSAVRITHIPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAEKEAADARR 297

Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           S+   +    +IR+Y   P   + D R   +  +   VLDGDLD  ++A 
Sbjct: 298 SQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLDSVIQAC 346


>gi|256158374|ref|ZP_05456272.1| peptide chain release factor 1 [Brucella ceti M490/95/1]
 gi|256253793|ref|ZP_05459329.1| peptide chain release factor 1 [Brucella ceti B1/94]
 gi|260169300|ref|ZP_05756111.1| peptide chain release factor 1 [Brucella sp. F5/99]
 gi|261758813|ref|ZP_06002522.1| peptide chain release factor 1 [Brucella sp. F5/99]
 gi|261738797|gb|EEY26793.1| peptide chain release factor 1 [Brucella sp. F5/99]
          Length = 359

 Score =  215 bits (547), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 116/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 10  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  +        +      +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 66  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 126 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSTLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 186 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK    +   ++ ++++G G 
Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V++GDLD+ + A ++  +
Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQ 348


>gi|148657451|ref|YP_001277656.1| peptide chain release factor 2 [Roseiflexus sp. RS-1]
 gi|148569561|gb|ABQ91706.1| bacterial peptide chain release factor 2 (bRF-2) [Roseiflexus sp.
           RS-1]
          Length = 317

 Score =  215 bits (547), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 142/311 (45%), Positives = 196/311 (63%), Gaps = 3/311 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+    L   +  I+ I  +L     L+ELA  EDD S+  + +  L+R    +E  + E
Sbjct: 1   MQRLTRLKEEVERIEAIDRQLTALADLIELAAAEDDDSLQADIAAELKRTGEAIEALEIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LL+G  D  DA+L + AG GGT++QDWA MLLRMY RW E+R F+   ++  +GEEAGI
Sbjct: 61  VLLNGPYDDRDAFLSIKAGTGGTDAQDWAEMLLRMYMRWGERRGFQVALIDKSEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ ++GP AYG  K E GVHRL+R+SP+++ + R TSF+ + V P VDD+ E+ I  
Sbjct: 121 KSATIELRGPYAYGSAKAEAGVHRLIRLSPFNAGNTRQTSFAMVEVLPEVDDAPEVVIRP 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIP---TGVVVQCQQERSQHKNKAQAWNMLRA 282
            D RID +R+SG GGQ VNTTDSAVRIT+ P     +VV CQ ERSQ +N+  A  +LR 
Sbjct: 181 EDIRIDVFRSSGHGGQGVNTTDSAVRITYKPGTPEQIVVTCQNERSQLQNRETAMRVLRG 240

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           +L E ELQ++ E          +  +G Q+R+Y L PY +VKD RT+ E +    VLDGD
Sbjct: 241 RLLERELQRKREERARLRGEYRQADFGNQMRTYYLHPYTLVKDHRTDHETSDVHAVLDGD 300

Query: 343 LDDFMKATLAI 353
           +D F++A L  
Sbjct: 301 IDPFIEAYLRW 311


>gi|326318376|ref|YP_004236048.1| peptide chain release factor 1 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323375212|gb|ADX47481.1| peptide chain release factor 1 [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 360

 Score =  215 bits (547), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 171/344 (49%), Gaps = 9/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QRL  L+       +  ++ + + + RE   +          + R  D     E+
Sbjct: 9   LERYAQRLEELDFLLSREDIMSDMAQYRTISREHAEVTQIAGRYARYRQREADLAGAREM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTESQDW 133
             + D  + +     +    +L     + + LL         +A+LE+ AG GG ES  +
Sbjct: 69  LDDPD-MADMAREEISAAEAELVQLEDELQRLLLPRDPDEARNAFLEIRAGTGGDESALF 127

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMYTR+A    +K E L   D E  G K   L ++G   YG L+ E G HR+ R+
Sbjct: 128 AGDLARMYTRYAATAGWKVEILSASDNEIGGYKEVVLRVEGDGVYGALRFESGGHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS  ++ V P  D+   I ++ +D RIDT+RASGAGGQH+N TDSAVR+ 
Sbjct: 188 PATETQGRIHTSACTVAVMPEPDEQQAITLNPADLRIDTFRASGAGGQHINKTDSAVRVV 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG+V +CQ  RSQH NKA+A  +L+A++ E E  +R   A      K  +G G    
Sbjct: 248 HLPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSER--AAKEAALRKGLVGSGDRSD 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   + D R N+       +++GDL + + A    +
Sbjct: 306 RIRTYNF-PQGRLTDHRINLTLYKLLAIMEGDLGEVLDALRHAR 348


>gi|315125019|ref|YP_004067023.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315018741|gb|ADT66834.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 355

 Score =  215 bits (547), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 114/345 (33%), Positives = 179/345 (51%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  ++R   LN+      +  ++ +   L +E+++L+  +   KE    L +      L
Sbjct: 6   LDPFLKRFEELNSLLSSSDIINDISKMTTLSKEQKNLEPIVLKAKEYLKTLDNIEENKAL 65

Query: 76  ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +      +E     +      E  +   L     D  + +LE+ AG GG E+  + 
Sbjct: 66  LNDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGTGGDEASLFV 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L++ Y R+AE R +K E +   +G   G K   +L+KG  AY  LK E G HR+ R+ 
Sbjct: 126 GDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHRVQRVP 185

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P   D IEIEI+ +D ++D  R+SG GGQ VNTTDSAVRITH
Sbjct: 186 QTESQGRVHTSAITVAVMP-EVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV  Q  +SQHKNK  A  +L+A+LY  E+Q+ E +A   E+ K+++G G    +
Sbjct: 245 IPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQESERLAKESEARKSQVGSGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++ DG  D+ ++  +   +
Sbjct: 303 IRTYNF-PQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQ 346


>gi|254717939|ref|ZP_05179750.1| peptide chain release factor 1 [Brucella sp. 83/13]
          Length = 351

 Score =  215 bits (547), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 116/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 2   DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARKEASDLAAM 57

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  +        +      +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 58  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 117

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 118 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 177

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 178 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 236

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK    +   ++ ++++G G 
Sbjct: 237 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 293

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V++GDLD+ + A ++  +
Sbjct: 294 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVNALISDHQ 340


>gi|300361412|ref|ZP_07057589.1| peptide chain release factor RF1 [Lactobacillus gasseri JV-V03]
 gi|300354031|gb|EFJ69902.1| peptide chain release factor RF1 [Lactobacillus gasseri JV-V03]
          Length = 362

 Score =  215 bits (547), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 96/342 (28%), Positives = 166/342 (48%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V     L     DP +  +      + +E   +   +   ++ +  + +     E+
Sbjct: 8   LEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADMREVVQKYRKYKSDIKEIDDNKEI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++   +    ++ EV   +       L     D  D  +E+   AGG E+ 
Sbjct: 68  ISSESDDDLVEMAKEENFELEKEVAELEDEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE + +K   ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAETQGWKVSLIDSEPTEVGGYKRVAVMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + ++I++   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RVPVTESQGRVHTSTATVAVMP-EYEQVDIDLDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    +  +        K  +G G  
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNRD--KYDAKRKDAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   V D R  +       V++G+LD+ + A 
Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTLNKLDRVMNGELDEIINAL 345


>gi|282859526|ref|ZP_06268631.1| peptide chain release factor 1 [Prevotella bivia JCVIHMP010]
 gi|282587754|gb|EFB92954.1| peptide chain release factor 1 [Prevotella bivia JCVIHMP010]
          Length = 370

 Score =  215 bits (547), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 91/359 (25%), Positives = 158/359 (44%), Gaps = 20/359 (5%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + D  D    R   ++T   DP +  +      L RE + L + +   K     L    
Sbjct: 6   SILDKLDGLEARFEEVSTLITDPDVIGDQARYVKLTREYKDLGDIMDARKRYIACLSTIK 65

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAG 126
              ++   E D  + +   + L   +      +       +     D+ +  +EV AG G
Sbjct: 66  EAKDILANESDPDMKEMAREELSENETLQPKLEEEIKILLVPKDPEDAKNVQMEVRAGTG 125

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  +  MY R+ +K+ +     ++++G   G K     + G   YG LK E G
Sbjct: 126 GDEAALFAGDIFNMYKRFCDKKGWTLSVTDVNEGAVGGFKEIDFAVSGDGVYGILKYESG 185

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   D+  R  TS +++ V P  D      I+E D + DT+R+SGAGGQ+VN  
Sbjct: 186 VHRVQRVPSTDTQGRMQTSAATVAVLPEADRFEVN-INEGDIKWDTFRSSGAGGQNVNKV 244

Query: 247 DSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           +S VR+ +            ++++C + R Q KNK +A + LR  +Y+ E QK   + +I
Sbjct: 245 ESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLRTFIYDREHQKY--VDDI 302

Query: 299 GESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               K+ +  G +   IR+Y   P   V D R           ++G++ + + A    +
Sbjct: 303 ANRRKSLVSTGDRSAKIRTYNY-PQGRVTDHRIGYTTHDLPGFMNGNIQEMIDALTVAE 360


>gi|167581337|ref|ZP_02374211.1| peptide chain release factor 2, programmed [Burkholderia
           thailandensis TXDOH]
 gi|167619419|ref|ZP_02388050.1| peptide chain release factor 2, programmed [Burkholderia
           thailandensis Bt4]
 gi|257138616|ref|ZP_05586878.1| peptide chain release factor 2 [Burkholderia thailandensis E264]
          Length = 248

 Score =  215 bits (547), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 149/247 (60%), Positives = 196/247 (79%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S  AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +AT+ + G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +
Sbjct: 61  NATIKVSGDYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++L+E
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            EL+KR+   +  ESSKT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF
Sbjct: 181 AELRKRQAEQDKLESSKTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTKAVLDGDLDDF 239

Query: 347 MKATLAI 353
           + A+L  
Sbjct: 240 ISASLKQ 246


>gi|265982882|ref|ZP_06095617.1| peptide chain release factor 1 [Brucella sp. 83/13]
 gi|306838261|ref|ZP_07471111.1| peptide chain release factor 1 [Brucella sp. NF 2653]
 gi|264661474|gb|EEZ31735.1| peptide chain release factor 1 [Brucella sp. 83/13]
 gi|306406664|gb|EFM62893.1| peptide chain release factor 1 [Brucella sp. NF 2653]
          Length = 359

 Score =  215 bits (547), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 116/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 10  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARKEASDLAAM 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  +        +      +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 66  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 126 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 186 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK    +   ++ ++++G G 
Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V++GDLD+ + A ++  +
Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVNALISDHQ 348


>gi|57238625|ref|YP_179756.1| peptide chain release factor 1 [Campylobacter jejuni RM1221]
 gi|73621534|sp|Q5HSH9|RF1_CAMJR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|57167429|gb|AAW36208.1| peptide chain release factor 1 [Campylobacter jejuni RM1221]
 gi|315059063|gb|ADT73392.1| Peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           S3]
          Length = 355

 Score =  215 bits (547), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 115/345 (33%), Positives = 180/345 (52%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  ++R   LN+      +  ++ +   L +E+++L+  +   KE    L +      L
Sbjct: 6   LDPFLKRFEELNSLLSSSDIINDISKMTTLSKEQKNLEPIVLKAKEYLKTLDNIEENKAL 65

Query: 76  ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +      +E     +      E  +   L     D  + +LE+ AGAGG E+  + 
Sbjct: 66  LNDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGAGGDEASLFV 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L++ Y R+AE R +K E +   +G   G K   +L+KG  AY  LK E G HR+ R+ 
Sbjct: 126 GDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHRVQRVP 185

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P   D IEIEI+ +D ++D  R+SG GGQ VNTTDSAVRITH
Sbjct: 186 QTESQGRVHTSAITVAVMP-EVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV  Q  +SQHKNK  A  +L+A+LY  E+Q+ E +A   E+ K+++G G    +
Sbjct: 245 IPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQESERLAKESEARKSQVGSGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++ DG  D+ ++  +   +
Sbjct: 303 IRTYNF-PQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQ 346


>gi|302381433|ref|YP_003817256.1| peptide chain release factor 1 [Brevundimonas subvibrioides ATCC
           15264]
 gi|302192061|gb|ADK99632.1| peptide chain release factor 1 [Brevundimonas subvibrioides ATCC
           15264]
          Length = 367

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 106/344 (30%), Positives = 170/344 (49%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   +  +        +  E   L +E   +      +  +     +   L  +
Sbjct: 20  LDQVLDRFHQVEARMGA---ASDGQEIVRLSKEHAEMKPVADAVLALAKARTEIEELQAM 76

Query: 76  ALEEDDCSILQET-SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +  +++ +       R+                 ++  A LEV AG GG E+  +A
Sbjct: 77  TADPEMAAMVADELETLNARLPEMERDVALLLAPRDADENASAVLEVRAGTGGDEAALFA 136

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+A  R +K E     +G+  G K     + G   +G LK E GVHR+ R+ 
Sbjct: 137 GDLFRMYSRYASTRGWKVELDSATEGDAGGYKEIIATVTGDGVFGRLKFESGVHRVQRVP 196

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P   + +EI+I + D RIDTYRASG+GGQHVN TDSAVRITH
Sbjct: 197 TTEAGGRIHTSAATVAVLP-EVEDVEIDIQDKDIRIDTYRASGSGGQHVNKTDSAVRITH 255

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            P+G+VV    E+SQH N+ +A   LR +LY+  +Q++ +     ++ K+++G G    +
Sbjct: 256 FPSGIVVTSS-EKSQHVNRDKAMKNLRVRLYD--MQRQMKDNARSDARKSQVGSGDRSER 312

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R  +   S   +L+GDLD  + A +A  +
Sbjct: 313 IRTYNF-PQGRVTDHRIGLTLHSLPQILEGDLDALLNALIAEDQ 355


>gi|237756512|ref|ZP_04585042.1| peptide chain release factor 1 [Sulfurihydrogenibium yellowstonense
           SS-5]
 gi|237691328|gb|EEP60406.1| peptide chain release factor 1 [Sulfurihydrogenibium yellowstonense
           SS-5]
          Length = 360

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 124/346 (35%), Positives = 186/346 (53%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   ++L  L     DP + ++  + + + +E + L   ++   E +        + +L
Sbjct: 9   LEGIEEKLKKLEELMADPEVLKDQSKIQSIAKEHKELSEILNLYNEYKKVNRQIEEVKQL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
                D  + +   + L+ +K   E  + +           D  +  LE+  GAGG E+ 
Sbjct: 69  LNSTPDDDLRELAEEELESLKKHREDLEKKIEIALLPKDPNDERNVILEIRQGAGGDEAS 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+AE+  +KTE L +H  E+ GIK    LIKG  AY  LK E GVHR+ 
Sbjct: 129 LFAAELFRMYQRYAERHGWKTEILSLHPTEKGGIKEVIALIKGKGAYSRLKYESGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS  ++ V P   + ++IEI   + RI+T RA GAGGQHVNTTDSAVR
Sbjct: 189 RVPETESSGRIHTSTVTVAVLP-EAEEVDIEIKPEELRIETMRAGGAGGQHVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPTG+VV CQ ERSQ +NK +A  +LRA+L +    +R E   I +  K ++G G +
Sbjct: 248 ITHIPTGMVVTCQDERSQLQNKMKAMQILRARLKDYY--ERLEKEKIAKERKEQVGTGER 305

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              IR+Y   P   V D R N      +D++DGDLD+ +   +A +
Sbjct: 306 SEKIRTYNF-PQNRVTDHRVNYTSYRINDIMDGDLDEIIDVLIAKE 350


>gi|312890071|ref|ZP_07749615.1| bacterial peptide chain release factor 1 (bRF-1) [Mucilaginibacter
           paludis DSM 18603]
 gi|311297603|gb|EFQ74728.1| bacterial peptide chain release factor 1 (bRF-1) [Mucilaginibacter
           paludis DSM 18603]
          Length = 357

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 108/346 (31%), Positives = 177/346 (51%), Gaps = 12/346 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN-- 69
           + D  +   +R   +  +   P + +++     + +E + L   +       + + +   
Sbjct: 1   MLDKLEAIKERWQDVERELSSPDIMKDMKRFAQMNKEYKDLTKVVEQYNIYYNVMSNIDS 60

Query: 70  --LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              IL     +E       E  + L + +   E  +   +     DS +A +E+  G GG
Sbjct: 61  NREILATEKDDEFREMAKAELDELLPQQEELEEKIRLMLIPKDPEDSRNAIVEIRGGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY R+ EK+ +KTE ++  +G   G K     +   +AYG LK E GV
Sbjct: 121 DEAALFAGDLYRMYIRFCEKQGWKTELVDFTEGTAGGYKEIVFNVLAEDAYGTLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +S+ V P  D+     I  +D R D + ASG GGQ VNTT 
Sbjct: 181 HRVQRVPDTETQGRVHTSAASVVVLPEADEFDVD-IHVNDIRKDLFCASGPGGQSVNTTY 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+V QCQ ++SQ KN  +A  +LR+++YE+ELQK  E+  I +  KT + 
Sbjct: 240 SAVRLTHLPTGIVAQCQDQKSQLKNYDKALQVLRSRIYEMELQKHLEV--ISKKRKTMVS 297

Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            G +   IR+Y   P   V + R  +   +  +V++G+L + M+A 
Sbjct: 298 TGDRSAKIRTYNY-PQGRVTEHRIGLTIYNLPEVMNGNLLEIMEAL 342


>gi|282861117|ref|ZP_06270182.1| peptide chain release factor 1 [Streptomyces sp. ACTE]
 gi|282563775|gb|EFB69312.1| peptide chain release factor 1 [Streptomyces sp. ACTE]
          Length = 358

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 116/350 (33%), Positives = 175/350 (50%), Gaps = 16/350 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +  +   + L  K  DP +  +   A+ L +    L   IS  +  +    D   
Sbjct: 1   MFEAVEELIGEHADLEKKLSDPSVHADQANARKLNKRYAELTPVISTYRAWKRTGDDIET 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E     DD     E  +  ++ +   E  +   +    +D  D  LE+ AGAGG ES 
Sbjct: 61  AREF--AADDPDFAAEVKELEKQREEITEKLRLLLVPRDPSDDKDVLLEIKAGAGGDESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG----------PNAYGWL 181
            +A  LLRMY R+AE+  +KTE ++  + E  G K   + +K              +  +
Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVAVKTKGGNGATEPGQGVWARM 178

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   +S  R HTS + + V P   + +++EI  +D RID YR+SG GGQ
Sbjct: 179 KYEGGVHRVQRVPSTESQGRIHTSAAGVLVTP-EAEEVDVEIHANDLRIDVYRSSGPGGQ 237

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR++L     +  E+ A+    
Sbjct: 238 SVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEAAEQEASDVRR 297

Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           S+   +    +IR+Y   P   + D R   +  +   VLDGDLD  ++A 
Sbjct: 298 SQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLDAVIQAC 346


>gi|332525328|ref|ZP_08401493.1| hypothetical protein RBXJA2T_05833 [Rubrivivax benzoatilyticus JA2]
 gi|332108602|gb|EGJ09826.1| hypothetical protein RBXJA2T_05833 [Rubrivivax benzoatilyticus JA2]
          Length = 248

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 143/247 (57%), Positives = 191/247 (77%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + +  AD ++ ++++ AGAGGTE+ DWA+MLLR Y ++ EK+ FK E +E  +G+ AGI+
Sbjct: 1   MFANPADPSNCFIDIQAGAGGTEACDWASMLLRQYLKYCEKKGFKAEVMEETEGDVAGIR 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SATL I+G  A+G L+ E GVHRLVR SP+DS   RHTSF+S++VYP VDDSIEIEI+ +
Sbjct: 61  SATLKIEGDYAFGHLRTETGVHRLVRKSPFDSAGGRHTSFASLFVYPEVDDSIEIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R DT+RASGAGGQH+N TDSAVR+THIPTG+VVQCQ +RSQH+N+ +AW MLR++LYE
Sbjct: 121 DVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIVVQCQNDRSQHRNRDEAWAMLRSRLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E++K+ E     E SKT++GWG QIRSYVL     +KDLRT +E ++   VLDGDLD F
Sbjct: 181 HEMRKQMEAQQKLEDSKTDVGWGHQIRSYVLD-QSRIKDLRTGVEISNTQKVLDGDLDPF 239

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 240 IEASLKQ 246


>gi|329943005|ref|ZP_08291779.1| peptide chain release factor 1 [Chlamydophila psittaci Cal10]
 gi|332287587|ref|YP_004422488.1| peptide chain release factor 1 [Chlamydophila psittaci 6BC]
 gi|313848161|emb|CBY17162.1| peptide chain release factor 1 [Chlamydophila psittaci RD1]
 gi|325506915|gb|ADZ18553.1| peptide chain release factor 1 [Chlamydophila psittaci 6BC]
 gi|328814552|gb|EGF84542.1| peptide chain release factor 1 [Chlamydophila psittaci Cal10]
 gi|328914838|gb|AEB55671.1| peptide chain release factor 1 [Chlamydophila psittaci 6BC]
          Length = 361

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 111/340 (32%), Positives = 177/340 (52%), Gaps = 11/340 (3%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLELAL 77
           +RL  +  K  +P ++ N  E  +L +E   L    +    +   +  L D+   L    
Sbjct: 10  KRLEEVEAKISNPEIFDNPKEYSLLSKEHARLSELKNTYDRVVAQEKILSDDKQALAQEK 69

Query: 78  EEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           + +  ++L+E   + +    ++    +   +     D  +  +E+ AG GG E+  +   
Sbjct: 70  DPEMIAMLEEGIQSGKAEVDKLYKILENLLVPPDPDDDLNVIMELRAGTGGDEAALFVGD 129

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
            +RMY  +A  + +K E L   + +  G K   + I G      L+ E G HR+ R+   
Sbjct: 130 CVRMYHLYASAKGWKYEVLSASESDIGGYKEYVMGISGTGVKRLLQYEAGTHRVQRVPET 189

Query: 197 DSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           ++  R HTS  ++ V P   ++  E+ I E D +IDT+RASGAGGQHVN TDSAVRITH+
Sbjct: 190 ETQGRVHTSAITVAVLPEPAENDEEVFIDEKDLKIDTFRASGAGGQHVNVTDSAVRITHL 249

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTGVVV CQ ERSQHKNKA+A  +L+A++ + E+Q+R + A+   S   ++G G    +I
Sbjct: 250 PTGVVVTCQDERSQHKNKAKAMRILKARIRDAEMQRRHKEASAMRS--AQVGSGDRSERI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           R+Y       V D R  +   S   V++GDLD    A ++
Sbjct: 308 RTYNFS-QNRVTDHRIGLTLYSLDKVMEGDLDTITSALVS 346


>gi|189499090|ref|YP_001958560.1| peptide chain release factor 1 [Chlorobium phaeobacteroides BS1]
 gi|189494531|gb|ACE03079.1| peptide chain release factor 1 [Chlorobium phaeobacteroides BS1]
          Length = 357

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 105/343 (30%), Positives = 177/343 (51%), Gaps = 12/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    +   L  +  DP +  +    + L +E   L   +      +        + ++
Sbjct: 5   LEALKDKYLRLEEQLSDPEIIADQKRFRKLNKEYSDLKEIVQGYDRYKSNKVQIEEVRKM 64

Query: 76  ALEEDDCSI----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +E D  +    L E  +  +      +  +   L   EADS +  +E+ AG GG E+ 
Sbjct: 65  LKQETDPEMKSLALVELEELQELQPELDQQLKLLLLPKEEADSRNVIIEIRAGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKGPNAYGWLKGEQGVHRL 190
            +A  LLRMY ++AE++ +K + +E ++    G  K A L I G + Y  +K E GVHR+
Sbjct: 125 LFATDLLRMYQKFAERKGWKCDMMEFNEASIPGACKEAILSISGHDVYATMKFESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +S+ V P   + ++IEI + D ++DT+R+ G GGQ+VN  ++AV
Sbjct: 185 QRVPETETQGRIHTSAASVAVLP-EAEDVDIEIRKDDLQLDTFRSGGKGGQNVNKVETAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH P+G+VV CQ+ERSQ +N+ +A  MLRAKLY+ +L ++          ++ +  G 
Sbjct: 244 RITHTPSGIVVACQEERSQLQNRERAMKMLRAKLYDQQLAEKNRERADL--RRSMVTTGD 301

Query: 311 Q---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +   IR+Y   P   V D R      +   +L+G+LDD ++A 
Sbjct: 302 RSAKIRTYNF-PQSRVTDHRIGYTSHALPQILEGNLDDIIEAL 343


>gi|116629883|ref|YP_815055.1| peptide chain release factor 1 [Lactobacillus gasseri ATCC 33323]
 gi|238853674|ref|ZP_04644042.1| peptide chain release factor 1 [Lactobacillus gasseri 202-4]
 gi|282851601|ref|ZP_06260966.1| peptide chain release factor 1 [Lactobacillus gasseri 224-1]
 gi|311110481|ref|ZP_07711878.1| peptide chain release factor 1 [Lactobacillus gasseri MV-22]
 gi|122273179|sp|Q042K5|RF1_LACGA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116095465|gb|ABJ60617.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
           gasseri ATCC 33323]
 gi|238833712|gb|EEQ25981.1| peptide chain release factor 1 [Lactobacillus gasseri 202-4]
 gi|282557569|gb|EFB63166.1| peptide chain release factor 1 [Lactobacillus gasseri 224-1]
 gi|311065635|gb|EFQ45975.1| peptide chain release factor 1 [Lactobacillus gasseri MV-22]
          Length = 362

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 96/342 (28%), Positives = 166/342 (48%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V     L     DP +  +      + +E   +   +   ++ +  + +     E+
Sbjct: 8   LEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADMREVVQKYRKYKSDIKEIDDNKEI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++   +    ++ EV   +       L     D  D  +E+   AGG E+ 
Sbjct: 68  ISSESDDDLVEMAKEENSELEKEVAKLEDEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE + +K   ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAETQGWKVSLIDSEPTEVGGYKRVAVMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + ++I++   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RVPVTESQGRVHTSTATVAVMP-EYEQVDIDLDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    +  +        K  +G G  
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNRD--KYDAKRKDAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   V D R  +       V++G+LD+ + A 
Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTLNKLDRVMNGELDEIINAL 345


>gi|86152633|ref|ZP_01070838.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85843518|gb|EAQ60728.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 355

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 114/345 (33%), Positives = 180/345 (52%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  ++R   LN+      +  ++ +   L +E+++L+  +  +KE    L +      L
Sbjct: 6   LDPFLRRFEELNSLLSSSDIINDISKMTTLSKEQKNLEPIVLKVKEYLKTLDNIEENKAL 65

Query: 76  ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +      +E     +      E  +   L     D  + +LE+ AG GG E+  + 
Sbjct: 66  LNDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGTGGDEASLFV 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L++ Y R+AE R +K E +   +G   G K   +L+KG  AY  LK E G HR+ R+ 
Sbjct: 126 GDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHRVQRVP 185

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P   D IEIEI+ +D ++D  R+SG GGQ VNTTDSAVRITH
Sbjct: 186 QTESQGRVHTSAITVAVMP-EVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV  Q  +SQHKNK  A  +L+A+LY  E+Q+ E +A   E+ K+++G G    +
Sbjct: 245 IPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQESERLAKESEARKSQVGSGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++ DG  D+ ++  +   +
Sbjct: 303 IRTYNF-PQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQ 346


>gi|167837158|ref|ZP_02464041.1| peptide chain release factor 2, programmed [Burkholderia
           thailandensis MSMB43]
          Length = 248

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 148/247 (59%), Positives = 196/247 (79%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S  AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +AT+ + G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+E++ +
Sbjct: 61  NATIKVSGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEVNPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++L+E
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            EL+KR+   +  ESSKT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF
Sbjct: 181 AELRKRQAEQDKLESSKTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTKAVLDGDLDDF 239

Query: 347 MKATLAI 353
           + A+L  
Sbjct: 240 ISASLKQ 246


>gi|313113834|ref|ZP_07799401.1| peptide chain release factor 1 [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310623861|gb|EFQ07249.1| peptide chain release factor 1 [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 363

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 105/348 (30%), Positives = 177/348 (50%), Gaps = 13/348 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D    R   L+ +   P    +    + LMRE    +  +   +  Q           L 
Sbjct: 9   DAVCHRFEELSIRLNQPDTAADPALFRRLMREYHDAEPVVQAYRAWQTAQDHLAQAKALL 68

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFES------LLSGEADSNDAYLEVHAGAGGTES 130
            E        +     +  +   + ++ E+      L     D  +  +E+  GAGG E+
Sbjct: 69  EEPGALDPDFKQMIQQEISEKSQDVEKLENNLKILLLPKDVNDGKNVIVEIRGGAGGEEA 128

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A+ LLRMYT + + R ++ E L +++ E  G+K A   + G  AY  LK E GVHR+
Sbjct: 129 ALFAHSLLRMYTMYVQSRGWQLEMLNLNETELGGVKEAIFSVDGAGAYNRLKYESGVHRV 188

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++  +   D RIDT+R+SGAGGQH+N T SA+
Sbjct: 189 QRVPETETQGRIHTSTATVAVMPQ-AEEVDFALDMKDLRIDTFRSSGAGGQHINKTSSAI 247

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+TH+PTG+VV+CQ ERSQ +NK +A  +LR++L  L  +++++   I  S + ++G G 
Sbjct: 248 RVTHLPTGMVVECQNERSQFQNKDKALEILRSRL--LAQKQKQQQDAINASRQGQVGTGD 305

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P     D R  +   + S ++DG+LD+ + A    ++
Sbjct: 306 RSEKIRTYNF-PQDRCTDHRIGLTVHNLSKIMDGNLDEVIDALATREQ 352


>gi|254731050|ref|ZP_05189628.1| peptide chain release factor 1 [Brucella abortus bv. 4 str. 292]
          Length = 351

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 116/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 2   DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 57

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  +        +      +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 58  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 117

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 118 TLFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 177

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 178 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 236

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK    +   ++ ++++G G 
Sbjct: 237 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 293

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V++GDLD+ + A ++  +
Sbjct: 294 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQ 340


>gi|205355626|ref|ZP_03222396.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205346403|gb|EDZ33036.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 355

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 115/345 (33%), Positives = 180/345 (52%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  ++R   LN+      +  ++ +   L +E+++L+  +   KE    L +      L
Sbjct: 6   LDPFLKRFEELNSLLSSSDIINDISKMTTLSKEQKNLEPIVLKAKEYLKTLDNIEENKAL 65

Query: 76  ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +      +E     +      E  +   L     D  + +LE+ AGAGG E+  + 
Sbjct: 66  LNDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGAGGDEASLFV 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L++ Y R+AE R +K E +   +G   G K   +L+KG  AY  LK E G HR+ R+ 
Sbjct: 126 GDLVKAYARYAENRSYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHRVQRVP 185

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P   D IEIEI+ +D ++D  R+SG GGQ VNTTDSAVRITH
Sbjct: 186 QTESQGRVHTSAITVAVMP-EVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV  Q  +SQHKNK  A  +L+A+LY  E+Q+ E +A   E+ K+++G G    +
Sbjct: 245 IPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQESERLAKESEARKSQVGSGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++ DG  D+ ++  +   +
Sbjct: 303 IRTYNF-PQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQ 346


>gi|300087667|ref|YP_003758189.1| peptide chain release factor 2 [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527400|gb|ADJ25868.1| peptide chain release factor 2 [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 327

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 133/320 (41%), Positives = 195/320 (60%), Gaps = 5/320 (1%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
             W++   ++ +MR    L   +   + ++ RL +   L  L   E             +
Sbjct: 6   GFWEDSDNSQKVMRRLTGLKKTVEQWRSLERRLNELAELDALGDPEMAQD----VDAETE 61

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
            +  E++  +FE   SGE D  +A L +HAGAGG ESQDWA MLL MY +W E+R +  E
Sbjct: 62  AVSDELDRLEFELSYSGEYDERNALLSIHAGAGGVESQDWAEMLLAMYVKWGERRDYDVE 121

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            LE   G+EAGIKS T   +G  AYG L+ E GVHRL+R+SP+DS+  RHTSF+ + V P
Sbjct: 122 ILETSAGDEAGIKSVTAEFRGRYAYGNLRSEHGVHRLIRLSPFDSDHARHTSFALVEVMP 181

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
            V++  E+EI+  D +++ +RASGAGGQ+V    SAVR+TH P+G+VV  Q ERSQH+N+
Sbjct: 182 EVEEDAEVEINPDDIKLEAFRASGAGGQNVQKVSSAVRLTHTPSGIVVTAQTERSQHQNR 241

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
             A ++LRA+L + ++ ++E      +  +    WG QIRSYVL PY+MVKD RT +E  
Sbjct: 242 EVAMSLLRARLLQRKIAEQEAEKARLKGERISNEWGSQIRSYVLHPYKMVKDHRTGMETG 301

Query: 334 SPSDVL-DGDLDDFMKATLA 352
           +   VL +G+++ F++A L 
Sbjct: 302 NTQAVLEEGNIEMFIEAYLK 321


>gi|332520510|ref|ZP_08396972.1| peptide chain release factor 2 [Lacinutrix algicola 5H-3-7-4]
 gi|332043863|gb|EGI80058.1| peptide chain release factor 2 [Lacinutrix algicola 5H-3-7-4]
          Length = 317

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 140/307 (45%), Positives = 205/307 (66%), Gaps = 2/307 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+  +     +         + D  ++ E   E +             + +  +E  +F+
Sbjct: 1   MKTLRVKKKWVEDYNTANTLIEDLDVIYEFYKENEATLNDVTNR--FTKAQTAIEDLEFK 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LS E DS  A L++ AGAGGTES DWA ML+RMY  +AEK  FK + L + +G+ AGI
Sbjct: 59  NMLSEEGDSLSAVLQITAGAGGTESCDWAQMLMRMYLMYAEKNNFKVKELNLQEGDVAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ TL I+G  A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDSIEIEI+ 
Sbjct: 119 KTVTLEIEGDYAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIEINP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D  I T R+SGAGGQ+VN  ++ V++TH P+G+ + C + RSQH N+++A  ML+++LY
Sbjct: 179 ADIEITTARSSGAGGQNVNKVETKVQLTHKPSGIQISCSETRSQHDNRSRALQMLKSQLY 238

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+ELQK+       E++K +I WG QIR+YV+ PY++VKD+RT  E  +   V+DGD+  
Sbjct: 239 EIELQKQLSQREDIEAAKMKIEWGSQIRNYVMHPYKLVKDVRTGFESGNVDAVMDGDITP 298

Query: 346 FMKATLA 352
           F+K+ L 
Sbjct: 299 FLKSYLM 305


>gi|270157830|ref|ZP_06186487.1| peptide chain release factor 1 [Legionella longbeachae D-4968]
 gi|269989855|gb|EEZ96109.1| peptide chain release factor 1 [Legionella longbeachae D-4968]
          Length = 351

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 113/338 (33%), Positives = 181/338 (53%), Gaps = 9/338 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLEL 75
            ++R   +     +  +  +  + K L +E   L+   +  +     +D +     LL  
Sbjct: 1   MLERYQEVGRLLSEASVIADQNQFKTLSKEYAQLEPIATCYETYIEAKDNVSSLEELLAG 60

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
             +E      +E +   ++++   E  Q+  +     D  + YLE+ AG GG E+  +A 
Sbjct: 61  EDKELAAMADEELASAKRQVEELDEQLQWHLIPKDPDDERNIYLEIRAGTGGDEAAIFAG 120

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY R+AE++ ++ E +    GE  G K     I G   Y  LK E G HR+ R+  
Sbjct: 121 DLYRMYIRYAEEQGWQQELISASHGEHGGYKEIITRISGNAVYSQLKFESGAHRVQRVPE 180

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ + P VD+  +I+I+  D RIDTYR+SGAGGQHVN TDSA+RITHI
Sbjct: 181 TESQGRVHTSACTVAILPEVDEIDDIQINPDDLRIDTYRSSGAGGQHVNKTDSAIRITHI 240

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTGVVV+CQ ERSQHKN+++A ++L+ +L + E  K+ +     ++ K+ +G G    +I
Sbjct: 241 PTGVVVECQDERSQHKNRSKAMSLLKTRLLDAEQSKQRKEQ--AQTRKSLVGTGDRSERI 298

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           R+Y   P   + D R N+     +DV++G L   ++  
Sbjct: 299 RTYNY-PQGRLTDHRINLTIYQLNDVMEGKLSLVVEPL 335


>gi|224538310|ref|ZP_03678849.1| hypothetical protein BACCELL_03201 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520095|gb|EEF89200.1| hypothetical protein BACCELL_03201 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 370

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 98/354 (27%), Positives = 168/354 (47%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   ++T   DP +  +      L +E + L + +   KE    L       E+
Sbjct: 11  LEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMEARKEYIQVLNGIEEAKEI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L   +      +       + +   DS +A LE+  G GG E+ 
Sbjct: 71  ISNEADPEMREMAREELDACQARQPELEEHIKLLLVPADPQDSKNAILEIRGGTGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYT++ E + ++ E   +++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 IFAGDLFRMYTKYCETKGWRMEISSVNEGAAGGFKEVICSVTGDNVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P  ++   + I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + ++           ++++C + R Q KNK +A + LR  +Y+ E QK  +  +I    K
Sbjct: 250 LRYVWRNPNTGASEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYLD--DIASKRK 307

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T +  G +   IR+Y   P   + D R N    + S  +DGD+ D +   +  +
Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDGDIQDCIDHLIVAE 360


>gi|62290730|ref|YP_222523.1| peptide chain release factor 1 [Brucella abortus bv. 1 str. 9-941]
 gi|82700642|ref|YP_415216.1| peptide chain release factor 1 [Brucella melitensis biovar Abortus
           2308]
 gi|189024940|ref|YP_001935708.1| peptide chain release factor 1 [Brucella abortus S19]
 gi|254694507|ref|ZP_05156335.1| peptide chain release factor 1 [Brucella abortus bv. 3 str. Tulya]
 gi|254696132|ref|ZP_05157960.1| peptide chain release factor 1 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254707598|ref|ZP_05169426.1| peptide chain release factor 1 [Brucella pinnipedialis M163/99/10]
 gi|256258272|ref|ZP_05463808.1| peptide chain release factor 1 [Brucella abortus bv. 9 str. C68]
 gi|260545992|ref|ZP_05821732.1| peptide chain release factor 1 [Brucella abortus NCTC 8038]
 gi|260760500|ref|ZP_05872843.1| peptide chain release factor 1 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|261214824|ref|ZP_05929105.1| peptide chain release factor 1 [Brucella abortus bv. 3 str. Tulya]
 gi|261315085|ref|ZP_05954282.1| peptide chain release factor 1 [Brucella pinnipedialis M163/99/10]
 gi|75496230|sp|Q57B22|RF1_BRUAB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361513|sp|Q2YLN8|RF1_BRUA2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238689404|sp|B2S825|RF1_BRUA1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|62196862|gb|AAX75162.1| PrfA, peptide chain release factor 1 [Brucella abortus bv. 1 str.
           9-941]
 gi|82616743|emb|CAJ11828.1| Class I peptide chain release factor domain:Peptide chain release
           factor 1:PCRF domain [Brucella melitensis biovar Abortus
           2308]
 gi|189020512|gb|ACD73234.1| Class I peptide chain release factor domain protein [Brucella
           abortus S19]
 gi|260096099|gb|EEW79975.1| peptide chain release factor 1 [Brucella abortus NCTC 8038]
 gi|260670932|gb|EEX57753.1| peptide chain release factor 1 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260916431|gb|EEX83292.1| peptide chain release factor 1 [Brucella abortus bv. 3 str. Tulya]
 gi|261304111|gb|EEY07608.1| peptide chain release factor 1 [Brucella pinnipedialis M163/99/10]
          Length = 359

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 116/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 10  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  +        +      +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 66  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 126 TLFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 186 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK    +   ++ ++++G G 
Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V++GDLD+ + A ++  +
Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQ 348


>gi|91226783|ref|ZP_01261436.1| peptide chain release factor 2 [Vibrio alginolyticus 12G01]
 gi|269964522|ref|ZP_06178762.1| peptide chain release factor 2 [Vibrio alginolyticus 40B]
 gi|91188914|gb|EAS75198.1| peptide chain release factor 2 [Vibrio alginolyticus 12G01]
 gi|269830759|gb|EEZ84978.1| peptide chain release factor 2 [Vibrio alginolyticus 40B]
          Length = 289

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 166/287 (57%), Positives = 212/287 (73%), Gaps = 1/287 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + D   LLELA+EE+D     E    L  ++ ++E  +F  + SG+ DS+D Y+++ AG+
Sbjct: 1   MEDVEGLLELAVEEEDQETFDEIEPELAELEEKLEKLEFRRMFSGDHDSSDCYIDLQAGS 60

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDW NMLLRMY RWAE + FK E +E+ +GE AG+KSAT+ I G  AYGWL+ E 
Sbjct: 61  GGTEAQDWTNMLLRMYLRWAEAKGFKAEVIEVSEGEVAGLKSATVRISGEYAYGWLRTET 120

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVR SP+DS  RRHTSF+S ++YP +D++I+I+I+ SD RID YRASGAGGQHVNT
Sbjct: 121 GVHRLVRKSPFDSGGRRHTSFASAFIYPEIDENIDIDINPSDLRIDVYRASGAGGQHVNT 180

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+       E +K++
Sbjct: 181 TESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSD 240

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IGWG QIRSYVL     +KDLRT IE  +   VLDGDLD F++A+L 
Sbjct: 241 IGWGSQIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDKFIEASLK 286


>gi|94984277|ref|YP_603641.1| peptide chain release factor 2 [Deinococcus geothermalis DSM 11300]
 gi|94554558|gb|ABF44472.1| peptide chain release factor 2 [Deinococcus geothermalis DSM 11300]
          Length = 380

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 138/326 (42%), Positives = 199/326 (61%), Gaps = 6/326 (1%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G  FD     +RL+ L+ +  DP LW N   A+ + +E   L   +   + +Q       
Sbjct: 28  GSTFDIPGKTRRLNELDRELSDPELWNNPSRARQVTQEAGSLRRIVDGYRTLQSDANSLN 87

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            +LE+A +E+        ++    I+  V+    E+L + +     A + V  GAGGTE+
Sbjct: 88  EMLEMASDEERAL----LAEEQDTIQARVDELYRETLFTMKHADAPAIVRVKGGAGGTEA 143

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           QDWA ML RMY RWAE+R +K + L+   GE+AG +S   +I+G  A+G +  E GVHRL
Sbjct: 144 QDWAGMLARMYMRWAERRGYKVDVLDEQPGEQAGYQSIEFIIRGEKAFGMMAPEHGVHRL 203

Query: 191 VRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           VR+SP+D+N+RR TSF+S+ V P   ++ I+I I +SD R+D YR+ GAGGQ VNTTDSA
Sbjct: 204 VRVSPFDANNRRQTSFASVDVVPEVPEEQIDIVIPDSDVRVDVYRSQGAGGQGVNTTDSA 263

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+TH+PTG++V  Q  RSQ KN+  A+ +L+ +LY+LE++KREE        + +I WG
Sbjct: 264 VRVTHLPTGIIVAIQVTRSQIKNREMAFQILKQRLYDLEMRKREEEEAKARGEQKKIEWG 323

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSP 335
            QIRSYVL     VKD RT + K +P
Sbjct: 324 SQIRSYVLDKQ-YVKDHRTGLMKHNP 348


>gi|308271577|emb|CBX28185.1| Peptide chain release factor 1 [uncultured Desulfobacterium sp.]
          Length = 363

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 107/347 (30%), Positives = 171/347 (49%), Gaps = 11/347 (3%)

Query: 11  GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           G +F+  + A  R   L     DP   ++    +  +RE   L   ++  +  ++     
Sbjct: 3   GIMFEKIEGAEVRFMELEMLLSDPDTIRDREAYQKYVREHSALSKIVAIYRSYKNINEQI 62

Query: 70  LILLELALEEDDCSI---LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
              + L   ED         E  +   + +   +  +   +   E D  +  LE+ AG G
Sbjct: 63  EESISLLKNEDPEIKELARDEIEELNLKKEDLEKQLRLLLIPKDEKDEKNVILEIRAGTG 122

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMY+R+AE R +K E L        G+K    LI+G  AY   K E G
Sbjct: 123 GDEAALFATDLFRMYSRYAENRNWKVEVLTHSPTGVGGLKEIVALIQGKGAYSSFKYESG 182

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   ++  R HTS  ++ V P   + +E++I   + ++D YR++G GGQ VNTT
Sbjct: 183 THRVQRVPVTEAQGRIHTSAVTVAVLP-EAEEVELDIDPGEIKVDVYRSTGPGGQSVNTT 241

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTG+VV CQ E+SQ KNK++A  +LRA+L +    ++ +        K +I
Sbjct: 242 DSAVRITHLPTGLVVTCQDEKSQFKNKSKAMKVLRARLLDNITMEQNQ--KRSAERKHQI 299

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G G    +IR+Y   P   V D R  +       +L+G++D+ +   
Sbjct: 300 GSGDRSERIRTYNF-PQSRVTDHRIGLTLYKLEYILEGNIDEIISEL 345


>gi|163843895|ref|YP_001628299.1| peptide chain release factor 1 [Brucella suis ATCC 23445]
 gi|189039961|sp|B0CIC3|RF1_BRUSI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|163674618|gb|ABY38729.1| peptide chain release factor 1 [Brucella suis ATCC 23445]
          Length = 359

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 116/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 10  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  +        +      +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 66  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 126 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIITTVSGKGVFSKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 186 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK    +   ++ ++++G G 
Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V++GDLD+ + A ++  +
Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQ 348


>gi|227892680|ref|ZP_04010485.1| peptide chain release factor RF1 [Lactobacillus ultunensis DSM
           16047]
 gi|227865551|gb|EEJ72972.1| peptide chain release factor RF1 [Lactobacillus ultunensis DSM
           16047]
          Length = 362

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 99/347 (28%), Positives = 169/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V     L     DP +  +      + +E   L   +   K+ +    +     ++
Sbjct: 8   LEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKQDKKELEDNKKI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              + D  +++   +    I+ E+   +       L     D  D  +E+   AGG E+ 
Sbjct: 68  ISGDSDPDLVEMAKEENSEIEKEIPKLEEQIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE++ +K   ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAERQGWKVSLIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + ++I+I   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMP-EYEQVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    + +  A      K  +G G  
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQ--AKYDAKRKNAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       V++G+LD+ + A +   +
Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQ 350


>gi|29829454|ref|NP_824088.1| peptide chain release factor 1 [Streptomyces avermitilis MA-4680]
 gi|46576778|sp|Q82J70|RF1_STRAW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|29606562|dbj|BAC70623.1| putative peptide chain release factor 1 [Streptomyces avermitilis
           MA-4680]
          Length = 358

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 115/350 (32%), Positives = 174/350 (49%), Gaps = 16/350 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +  +   + L  K  DP +  +   A+ L +    L   ++  +  +    D   
Sbjct: 1   MFEAVEELIGEHADLEKKLADPSVHADQANARKLNKRYAELTPIVATYRSWKQTGDDIET 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E     DD     E  D  ++ +   E  +   +    +D  D  LE+ AGAGG ES 
Sbjct: 61  AKEF--VADDPDFAAEVKDLEKQREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG----------PNAYGWL 181
            +A  LLRMY R+AE+  +KTE ++  + E  G K   + +K              +  +
Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVAVKTKGGQGATEPGQGVWARM 178

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   +S  R HTS + + V P   + +++EI  +D RID YR+SG GGQ
Sbjct: 179 KYEGGVHRVQRVPSTESQGRIHTSAAGVLVTP-EAEEVDVEIHANDLRIDVYRSSGPGGQ 237

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR++L     ++ E  A     
Sbjct: 238 SVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAEREAADARR 297

Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           S+   +    +IR+Y   P   + D R   +  +   VLDGDLD  ++A 
Sbjct: 298 SQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLDAMIQAC 346


>gi|23502722|ref|NP_698849.1| peptide chain release factor 1 [Brucella suis 1330]
 gi|161619787|ref|YP_001593674.1| peptide chain release factor 1 [Brucella canis ATCC 23365]
 gi|254700516|ref|ZP_05162344.1| peptide chain release factor 1 [Brucella suis bv. 5 str. 513]
 gi|254704887|ref|ZP_05166715.1| peptide chain release factor 1 [Brucella suis bv. 3 str. 686]
 gi|254708865|ref|ZP_05170676.1| peptide chain release factor 1 [Brucella pinnipedialis B2/94]
 gi|254713712|ref|ZP_05175523.1| peptide chain release factor 1 [Brucella ceti M644/93/1]
 gi|254715938|ref|ZP_05177749.1| peptide chain release factor 1 [Brucella ceti M13/05/1]
 gi|256030391|ref|ZP_05444005.1| peptide chain release factor 1 [Brucella pinnipedialis M292/94/1]
 gi|256370269|ref|YP_003107780.1| peptide chain release factor 1 [Brucella microti CCM 4915]
 gi|260567639|ref|ZP_05838109.1| peptide chain release factor 1 [Brucella suis bv. 4 str. 40]
 gi|261217701|ref|ZP_05931982.1| peptide chain release factor 1 [Brucella ceti M13/05/1]
 gi|261316358|ref|ZP_05955555.1| peptide chain release factor 1 [Brucella pinnipedialis B2/94]
 gi|261321452|ref|ZP_05960649.1| peptide chain release factor 1 [Brucella ceti M644/93/1]
 gi|261751020|ref|ZP_05994729.1| peptide chain release factor 1 [Brucella suis bv. 5 str. 513]
 gi|261755581|ref|ZP_05999290.1| peptide chain release factor 1 [Brucella suis bv. 3 str. 686]
 gi|32171563|sp|Q8FYK3|RF1_BRUSU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039960|sp|A9M8K5|RF1_BRUC2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|23348737|gb|AAN30764.1| peptide chain release factor 1 [Brucella suis 1330]
 gi|161336598|gb|ABX62903.1| peptide chain release factor 1 [Brucella canis ATCC 23365]
 gi|256000432|gb|ACU48831.1| peptide chain release factor 1 [Brucella microti CCM 4915]
 gi|260157157|gb|EEW92237.1| peptide chain release factor 1 [Brucella suis bv. 4 str. 40]
 gi|260922790|gb|EEX89358.1| peptide chain release factor 1 [Brucella ceti M13/05/1]
 gi|261294142|gb|EEX97638.1| peptide chain release factor 1 [Brucella ceti M644/93/1]
 gi|261295581|gb|EEX99077.1| peptide chain release factor 1 [Brucella pinnipedialis B2/94]
 gi|261740773|gb|EEY28699.1| peptide chain release factor 1 [Brucella suis bv. 5 str. 513]
 gi|261745334|gb|EEY33260.1| peptide chain release factor 1 [Brucella suis bv. 3 str. 686]
          Length = 359

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 116/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 10  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  +        +      +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 66  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 126 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 186 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK    +   ++ ++++G G 
Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V++GDLD+ + A ++  +
Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQ 348


>gi|225628073|ref|ZP_03786108.1| peptide chain release factor 1 [Brucella ceti str. Cudo]
 gi|261220926|ref|ZP_05935207.1| peptide chain release factor 1 [Brucella ceti B1/94]
 gi|225616898|gb|EEH13945.1| peptide chain release factor 1 [Brucella ceti str. Cudo]
 gi|260919510|gb|EEX86163.1| peptide chain release factor 1 [Brucella ceti B1/94]
          Length = 377

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 116/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 28  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 83

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  +        +      +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 84  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 143

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 144 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSTLKFESGVHRV 203

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 204 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 262

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK    +   ++ ++++G G 
Sbjct: 263 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 319

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V++GDLD+ + A ++  +
Sbjct: 320 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQ 366


>gi|167752375|ref|ZP_02424502.1| hypothetical protein ALIPUT_00619 [Alistipes putredinis DSM 17216]
 gi|167660616|gb|EDS04746.1| hypothetical protein ALIPUT_00619 [Alistipes putredinis DSM 17216]
          Length = 361

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 104/346 (30%), Positives = 170/346 (49%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    +   +  K  DP +  +V +     +E + L+  I   +  +  + +     ++
Sbjct: 10  LDGLKLKYEEIGQKLTDPEVIADVKQFIQFNKEYRELEPIIEASERYRTAIANLAEAKDI 69

Query: 76  ALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              + D  + +           +I+   E  +   +     D+ +A +E+  G GG E+ 
Sbjct: 70  LANDKDEEMREMARGEIAELEPKIETLEEEIKLLLIPKDPQDAKNAIVEIRGGTGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L+RMYT++ E + +K E     +G   G K   + + G N YG LK E GVHR+ 
Sbjct: 130 IFAGDLMRMYTKYIESKGWKYEITSFSEGTAGGYKEVVMKVTGNNVYGTLKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P  ++     IS +D R D + ASG GGQ VNTT SA+R
Sbjct: 190 RVPQTETQGRVHTSAASVAVLPEAEEFDVE-ISMNDIRKDIFCASGPGGQSVNTTYSAIR 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +THIPTG+VVQCQ ++SQ KN  +A+  LR +++ LE  K  +   I    KT +  G +
Sbjct: 249 LTHIPTGIVVQCQDQKSQLKNFDKAFEELRTRVFNLEYSKYLDE--IASKRKTMVSTGDR 306

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              IR+Y   P   + D R N    + S  +DGD+ D +   +  +
Sbjct: 307 SAKIRTYNY-PQGRITDHRINYTIYNLSAFMDGDIQDCIDHLIVAE 351


>gi|332287121|ref|YP_004422022.1| peptide chain release factor 2 [Chlamydophila psittaci 6BC]
 gi|325506910|gb|ADZ18548.1| peptide chain release factor 2 [Chlamydophila psittaci 6BC]
 gi|328914361|gb|AEB55194.1| peptide chain release factor 2 [Chlamydophila psittaci 6BC]
          Length = 294

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 145/288 (50%), Positives = 195/288 (67%), Gaps = 1/288 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + +    L       D  + ++        +  +   + + LLSGE D N  +L ++AGA
Sbjct: 1   MDNLAFFLNDGDVSADPELREDLEKEFAICENILSEWETQRLLSGEVDKNPCFLTINAGA 60

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTES DW  ML RMY RWA + ++K E ++  +G+ AGIK  T+   G  AYG+ K E+
Sbjct: 61  GGTESCDWVEMLFRMYCRWAAQHQWKVEVIDRQEGDVAGIKHVTVKFSGDYAYGYAKAER 120

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVRISP+DSN++RHTSF+S+ VYP +DD IEI+I  +D RIDT+R+SGAGGQHVN 
Sbjct: 121 GVHRLVRISPFDSNAKRHTSFASVDVYPEIDDEIEIDIRPNDLRIDTFRSSGAGGQHVNV 180

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITHIPTG++V CQ+ERSQ +N+     MLRA++Y+  LQ+R E   I   +K E
Sbjct: 181 TDSAVRITHIPTGIMVSCQRERSQIQNRESCMKMLRARMYQQILQERLEKQLIDRKNKKE 240

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
           I WG QIR+YV QPY +VKD+RT  E  +   ++DG+ LDDF+KA LA
Sbjct: 241 IAWGSQIRNYVFQPYTLVKDVRTGHETGNVQAMMDGELLDDFVKAYLA 288


>gi|294851112|ref|ZP_06791785.1| peptide chain release factor 1 [Brucella sp. NVSL 07-0026]
 gi|294819701|gb|EFG36700.1| peptide chain release factor 1 [Brucella sp. NVSL 07-0026]
          Length = 377

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 116/348 (33%), Positives = 187/348 (53%), Gaps = 18/348 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 28  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 83

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           + +    + ++  +        +      +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 84  SDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 143

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 144 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 203

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 204 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 262

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK    +   ++ ++++G G 
Sbjct: 263 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 319

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V++GDLD+ + A ++  +
Sbjct: 320 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQ 366


>gi|265993634|ref|ZP_06106191.1| peptide chain release factor 1 [Brucella melitensis bv. 3 str.
           Ether]
 gi|262764615|gb|EEZ10536.1| peptide chain release factor 1 [Brucella melitensis bv. 3 str.
           Ether]
          Length = 372

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 115/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 23  DQLLKRFSMIESQMANNP----DSDSYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 78

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  +        +      +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 79  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 138

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 139 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 198

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 199 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 257

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK    +   ++ ++++G G 
Sbjct: 258 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 314

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V++G+LD+ + A ++  +
Sbjct: 315 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGELDELVDALISDHQ 361


>gi|76810558|ref|YP_334108.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 1710b]
 gi|121600418|ref|YP_993518.1| peptide chain release factor 2, programmed [Burkholderia mallei
           SAVP1]
 gi|124383704|ref|YP_001029053.1| peptide chain release factor 2 [Burkholderia mallei NCTC 10229]
 gi|126449475|ref|YP_001081026.1| peptide chain release factor 2, programmed [Burkholderia mallei
           NCTC 10247]
 gi|134278044|ref|ZP_01764759.1| peptide chain release factor 2 [Burkholderia pseudomallei 305]
 gi|167720343|ref|ZP_02403579.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei DM98]
 gi|167739335|ref|ZP_02412109.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei 14]
 gi|167816549|ref|ZP_02448229.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei 91]
 gi|167824945|ref|ZP_02456416.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei 9]
 gi|167846462|ref|ZP_02471970.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei B7210]
 gi|167895040|ref|ZP_02482442.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei 7894]
 gi|167903426|ref|ZP_02490631.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei NCTC 13177]
 gi|167911676|ref|ZP_02498767.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei 112]
 gi|167919676|ref|ZP_02506767.1| peptide chain release factor 2, programmed [Burkholderia
           pseudomallei BCC215]
 gi|254177740|ref|ZP_04884395.1| peptide chain release factor 2, programmed [Burkholderia mallei
           ATCC 10399]
 gi|254195760|ref|ZP_04902186.1| peptide chain release factor 2 [Burkholderia pseudomallei S13]
 gi|254357976|ref|ZP_04974249.1| peptide chain release factor 2 [Burkholderia mallei 2002721280]
 gi|76580011|gb|ABA49486.1| peptide chain release factor 2, programmed frameshift [Burkholderia
           pseudomallei 1710b]
 gi|121229228|gb|ABM51746.1| peptide chain release factor 2, programmed [Burkholderia mallei
           SAVP1]
 gi|134251694|gb|EBA51773.1| peptide chain release factor 2 [Burkholderia pseudomallei 305]
 gi|148027103|gb|EDK85124.1| peptide chain release factor 2 [Burkholderia mallei 2002721280]
 gi|160698779|gb|EDP88749.1| peptide chain release factor 2, programmed [Burkholderia mallei
           ATCC 10399]
 gi|169652505|gb|EDS85198.1| peptide chain release factor 2 [Burkholderia pseudomallei S13]
          Length = 248

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 149/247 (60%), Positives = 196/247 (79%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S  AD N+ ++++ AGAGGTE+ DWA+MLLR Y R+ E++ FK E LE  DG+ AGIK
Sbjct: 1   MFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +AT+ + G  AYG+L+ E G+HRLVR SP+DS+  RHTSFSS++VYP +DDSIE+EI+ +
Sbjct: 61  NATIKVSGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEIDDSIEVEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQH+N TDSAVRITH+PTG+VVQCQ +RSQH+N+A+A  ML+++L+E
Sbjct: 121 DLRIDTYRASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            EL+KR+   +  ESSKT++GWG QIRSYVL     VKDLRTN+E ++   VLDGDLDDF
Sbjct: 181 AELRKRQAEQDKLESSKTDVGWGHQIRSYVLD-QSRVKDLRTNVEMSNTKAVLDGDLDDF 239

Query: 347 MKATLAI 353
           + A+L  
Sbjct: 240 ISASLKQ 246


>gi|149925825|ref|ZP_01914089.1| peptide chain release factor 1 [Limnobacter sp. MED105]
 gi|149825942|gb|EDM85150.1| peptide chain release factor 1 [Limnobacter sp. MED105]
          Length = 360

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 120/341 (35%), Positives = 174/341 (51%), Gaps = 7/341 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +RL+ L       +   ++ + K + RER  L  A     E      D     E 
Sbjct: 9   LTRLAERLADLEEFLSSQNAANDMAQFKAITRERSELLPATERFAEYLSIEADLNTAQEW 68

Query: 76  ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E     +    +     Q   L     D  +A LE+ AG GG ES  +A
Sbjct: 69  LSDPDMRDMAREEIAQNEAKLAQLEADLQRLLLPKDPNDHRNAMLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR+AE++ ++ E +   + E  G K   + + G + Y  LK E G HR+ R+ 
Sbjct: 129 GDLFRMYTRYAERQGWQIEVMSASESELGGYKEVIIRLAGDHVYKHLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V    D++  IEI+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 ATESQGRIHTSACTVAVMAEPDEAEVIEINPADLRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV+CQ ERSQHKNKA+A  +L  +L +   ++R+  A      ++ +G G    +
Sbjct: 249 LPTGLVVECQDERSQHKNKAKAMKVLNVRLQDKIDRERQ--AAEASERRSLVGSGDRSER 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       ++DGDL D M    A
Sbjct: 307 IRTYNF-PQGRMTDHRINLTLYKLDYIMDGDLTDLMNGLTA 346


>gi|99080782|ref|YP_612936.1| peptide chain release factor 1 [Ruegeria sp. TM1040]
 gi|119361610|sp|Q1GI42|RF1_SILST RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|99037062|gb|ABF63674.1| bacterial peptide chain release factor 1 (bRF-1) [Ruegeria sp.
           TM1040]
          Length = 350

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 174/344 (50%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               +QR  +L     D            L +E   L   +  I   Q  L D     E+
Sbjct: 7   LQQILQRYQYLEAAMADGAGGD----IAKLAKEYSDLRPVVEQISAYQQLLSDLAEAEEM 62

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  ++ +E    L+          Q   L   EADS  A LE+  G GG E+  +A
Sbjct: 63  LADPDMKALAEEEIPTLKAALPQAEHALQLALLPKDEADSRAAILEIRPGTGGDEAALFA 122

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE + +K + +E    E  G+K     I G   +  LK E GVHR+ R+ 
Sbjct: 123 ADLYRMYSRYAETQGWKVDVIEEQASELGGLKELVARINGDGVFARLKYESGVHRVQRVP 182

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++I+I  +D RIDT RASGAGGQHVNTTDSAVRITH
Sbjct: 183 VTESGGRIHTSAATVAVLP-EAEDVDIKIDANDLRIDTMRASGAGGQHVNTTDSAVRITH 241

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV    E+SQH+N+  A  +L+ +LY+LE Q+ +          +++G G    +
Sbjct: 242 LPTGLVVTSS-EKSQHRNREIAMQVLKTRLYDLERQRIDTER--SADRASQVGSGDRSER 298

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++ GDLD+ + A ++  +
Sbjct: 299 IRTYNF-PQGRMSDHRINLTLYKLDQIMGGDLDEIIDALISEHQ 341


>gi|152989856|ref|YP_001355578.1| peptide chain release factor 1 [Nitratiruptor sp. SB155-2]
 gi|166223578|sp|A6Q162|RF1_NITSB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|151421717|dbj|BAF69221.1| peptide chain release factor 1 [Nitratiruptor sp. SB155-2]
          Length = 354

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 113/340 (33%), Positives = 185/340 (54%), Gaps = 8/340 (2%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           +QR + +N     P + Q++ +   L +E+  ++  +   KE  + L        L  +E
Sbjct: 10  IQRYNEINELLSSPEITQDIKKMTALSKEQSEIEPIVEKAKEYMNILEAIEENRSLIEDE 69

Query: 80  DDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +   + +E    L+  K +  E  +   +     D  D YLE+ AG GG E+  +A+ L 
Sbjct: 70  ELGELAKEELKELEPKKEQLEEEIKVLLISKDPNDEKDIYLEIRAGTGGEEAALFASDLF 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           + Y R+AEK+ ++ E +   + +  G K     IKG   Y  LK E G HR+ R+   +S
Sbjct: 130 KAYARYAEKKGWRVEIVSSSESDSGGYKEIIAKIKGQGVYSRLKYEAGTHRVQRVPETES 189

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS  ++ + P   D +++EI+ +D +ID YR+SG GGQ VNTTDSAVRITHIPTG
Sbjct: 190 QGRIHTSAVTVAIMP-EVDDVDVEINPNDLKIDVYRSSGHGGQSVNTTDSAVRITHIPTG 248

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315
           +VV  Q E+SQHKNK +A  +L+A+++E  +++++E   + +  K ++G G    +IR+Y
Sbjct: 249 IVVAMQDEKSQHKNKEKALKILKARIFEKRMREQQE--ALAKDRKEQVGSGDRSERIRTY 306

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              P   V D R  +      +V+ GDLD  ++  +A  +
Sbjct: 307 NF-PQNRVTDHRIGLTLYKLEEVMQGDLDQIIEPLIAHYQ 345


>gi|326803667|ref|YP_004321485.1| peptide chain release factor 1 [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651316|gb|AEA01499.1| peptide chain release factor 1 [Aerococcus urinae ACS-120-V-Col10a]
          Length = 360

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 111/347 (31%), Positives = 170/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   L     DP +  +    + L +E   L   +   K  ++ +       EL
Sbjct: 6   LDTFIARYQELAELLSDPDVINDHKRFRDLAKEEADLRPKVGTFKHYKEVVSGIEDTEEL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQ 131
             E  +  +L+     L ++K E +  + E     L S   D  +  +E+   AGG E+Q
Sbjct: 66  IKETSEEDMLELAKSELDQLKAERDDLEEEIKVLMLPSDPNDDKNIIMEIRGAAGGDEAQ 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY+R+AE + +  E  +    +  G K   L I G   Y  LK E G HR+ 
Sbjct: 126 LFAADLFEMYSRYAESQGWHVEVADASSNDLGGYKEIILQISGDKVYSKLKYESGAHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P ++D    EI E D R D YRASGAGGQHVN T SAVR
Sbjct: 186 RVPKTESQGRVHTSTATVGVMPELEDLD-FEIDEKDIRTDIYRASGAGGQHVNKTSSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+ V  Q +RSQ +N+ +A  +LR+++Y+    + +E     E  K  +G G  
Sbjct: 245 MTHIPTGIQVAMQDQRSQQQNREKAMLILRSRVYDYY--QSQEQDEYDEKRKNLVGTGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R N+       ++ G+LD+ + A +   +
Sbjct: 303 SERIRTYNY-PQNRVTDHRINLTLQKLDRIMGGELDEIIDALILADQ 348


>gi|311747486|ref|ZP_07721271.1| peptide chain release factor 2 [Algoriphagus sp. PR1]
 gi|126574844|gb|EAZ79215.1| peptide chain release factor 2 [Algoriphagus sp. PR1]
          Length = 315

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 140/309 (45%), Positives = 199/309 (64%), Gaps = 2/309 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M++ Q      +  + ++  + D  +L E    ++               K  VE  + +
Sbjct: 1   MKQIQARKTWTTSYENLEKAIEDLEVLYEFYSADEVSEEEMSREFEKA--KSTVEELELK 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            +LS E D  +A LE++ GAGGTES DWA++L+RMY  W EK  +K   +++  G+ AGI
Sbjct: 59  KMLSSEEDQLNAVLEINPGAGGTESNDWASILMRMYIMWGEKNGYKVREVDVQQGDVAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KS TL  +GP AYG+LK E GVHRLVRISP+DS  RRHTSF+S++ YP VDDSIEI+I+ 
Sbjct: 119 KSCTLEFEGPLAYGFLKSETGVHRLVRISPFDSGGRRHTSFASVYAYPEVDDSIEIDINP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D  + T R+ GAGGQ+VN  ++ V++TH PTG+VV CQ ERSQ  N+ +A  ML+++L+
Sbjct: 179 ADIELHTSRSGGAGGQNVNKVETKVQLTHKPTGIVVVCQIERSQLANREKAMQMLKSRLF 238

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           +LE++KR       ESSK  + +G QIR+YVL PY++VKD RT  E +    VLDG L++
Sbjct: 239 QLEVEKRNAEIAKIESSKLRVDFGSQIRNYVLHPYKLVKDARTGHETSDTQHVLDGGLNE 298

Query: 346 FMKATLAIK 354
           FMKA L  +
Sbjct: 299 FMKAYLLAQ 307


>gi|189467991|ref|ZP_03016776.1| hypothetical protein BACINT_04385 [Bacteroides intestinalis DSM
           17393]
 gi|189436255|gb|EDV05240.1| hypothetical protein BACINT_04385 [Bacteroides intestinalis DSM
           17393]
          Length = 370

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 98/354 (27%), Positives = 168/354 (47%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   ++T   DP +  +      L +E + L + +   KE    L       E+
Sbjct: 11  LEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMEARKEYIQVLNGIEEAKEI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L   +      +       + +   DS +A LE+  G GG E+ 
Sbjct: 71  ITNEADPEMREMAREELDACQARQPELEEHIKLLLVPADPQDSKNAILEIRGGTGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYT++ E + +K E   +++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 IFAGDLFRMYTKFCETKGWKMEISSVNEGAAGGFKEIICSVTGDNVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P  ++   + I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + ++           ++++C + R Q KNK +A + LR  +Y+ E QK  +  +I    K
Sbjct: 250 LRYVWKNPNTGVSEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKYLD--DIASKRK 307

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T +  G +   IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360


>gi|197120070|ref|YP_002140497.1| peptide chain release factor 1 [Geobacter bemidjiensis Bem]
 gi|197089430|gb|ACH40701.1| peptide chain release factor 1 [Geobacter bemidjiensis Bem]
          Length = 359

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 106/328 (32%), Positives = 172/328 (52%), Gaps = 10/328 (3%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LILLELALEEDDCSIL 85
              DP +  N  E + L +E   L   ++  +E +  L D      LL+   +E      
Sbjct: 20  LLSDPEVLGNQTEFRKLSKEHSGLAELVAAYREYKKILSDIDDNKELLKEPDQEMREMAQ 79

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            E      R ++     +   L     D  +  LE+ AG GG ES  +A  L RMY+R+A
Sbjct: 80  AELLSLEARREVLEGEIKLLLLPKDPNDDKNVVLEIRAGTGGDESALFAGDLFRMYSRFA 139

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E  +++ E +   + E+ G K    L++G   +  LK E G HR+ R+   ++  R HTS
Sbjct: 140 ETNRWRVEIISASESEKGGFKEVIALVEGTGVFAKLKYESGTHRVQRVPETEAQGRIHTS 199

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
             ++ V P   + ++I+I+ +D +ID YR+SGAGGQHVNTTDSAVRITH+PTG VV CQ+
Sbjct: 200 ACTVAVMP-EAEDVDIDINPADLKIDVYRSSGAGGQHVNTTDSAVRITHLPTGTVVACQE 258

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQM 322
           ERSQ KN+A+A  +L++++ +  + ++   A +    K+++G G    +IR+Y   P   
Sbjct: 259 ERSQIKNRAKAMKVLKSRILDNIVMEQN--AKLAADRKSQVGSGDRSERIRTYNF-PQGR 315

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           + D R  +       ++ GD+ +   + 
Sbjct: 316 MTDHRIGLTLYRLDAIMAGDIAEIADSL 343


>gi|213964464|ref|ZP_03392664.1| peptide chain release factor 1 [Corynebacterium amycolatum SK46]
 gi|213952657|gb|EEB64039.1| peptide chain release factor 1 [Corynebacterium amycolatum SK46]
          Length = 357

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 116/348 (33%), Positives = 178/348 (51%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +     L  +  DP L  +   A+ + +    L   I   K++ +   D     E+
Sbjct: 8   VDDILSEYHGLEAQLADPELHNDPKAARKVGKRFNELQPVIQTHKKLTEVQDDLEAAREM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D     E        +   E            DS+D  +E+ +GAGG E+  +A 
Sbjct: 68  --AYEDSEFAAEAERLAAEAEELEEKLADLLAPRDPHDSDDIVMELKSGAGGEEAALFAG 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190
            L RMY R+AEK  F TE L + + +  G+K  T+ I+        A+   K E GVHR+
Sbjct: 126 ELARMYQRYAEKHGFTTEILGLSESDLGGVKDMTMSIRAKTPSRDGAWSVFKFEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R  TS + + VYP  D+  +I+I E D R+D YR+SG GGQ VNTTDSAV
Sbjct: 186 QRVPVTESQGRIQTSAAGVLVYPEPDEVEDIQIDEKDLRVDVYRSSGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307
           R+TH+PTG+VV CQ+ERSQ +NKA+A  +L A+L +++ ++  E A   +  K+++    
Sbjct: 246 RLTHLPTGLVVTCQKERSQIQNKARAMQVLAARLQQMKEEEIAEAA--SDQRKSQVRNMD 303

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R   +  +   VL GD+DD +KA    ++
Sbjct: 304 RSERIRTYNF-PENRVSDHRIGYKAHNLDSVLGGDMDDLLKALHDAER 350


>gi|172058704|ref|YP_001815164.1| peptide chain release factor 1 [Exiguobacterium sibiricum 255-15]
 gi|229576657|sp|B1YEH9|RF1_EXIS2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|171991225|gb|ACB62147.1| peptide chain release factor 1 [Exiguobacterium sibiricum 255-15]
          Length = 352

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 104/348 (29%), Positives = 175/348 (50%), Gaps = 9/348 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D       R   LN    DP + ++  + + + +E+  L   +   +  +D++     
Sbjct: 1   MLDRLSALEDRYEKLNDLLADPAIIKDTNQLREVSKEQSQLAPTVEVYRVYRDKMEAYQE 60

Query: 72  LLELALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
              +  + +      +E +     IK      +   L     D  +  +E+   AGG E+
Sbjct: 61  ARHMLTDPEMRDLAKEEVAVLEPEIKDLETKLKALLLPKDPNDDKNVIVEIRGAAGGDEA 120

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L +MY+++AEK+ +K E ++    E  G K    ++KG  AY  LK E G HR+
Sbjct: 121 ALFAGDLFKMYSKFAEKQNWKIEIIDASYTELGGYKEIIFIVKGSGAYSKLKYENGAHRV 180

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E+EI + D R+DT+ +SG GGQ VNTT SAV
Sbjct: 181 QRVPSTESGGRIHTSTATVAVLP-EAEDVEVEIHDKDVRVDTFTSSGPGGQSVNTTQSAV 239

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+TH+PTG+V  CQ E+SQ KNK +A  +LRA++Y+    +RE+ A   E  K+ +G G 
Sbjct: 240 RVTHVPTGIVASCQDEKSQIKNKEKAMKVLRARVYDKI--QREQQAEYDEKRKSAVGTGD 297

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y       V D R  +       +L G++D+ +   +   +
Sbjct: 298 RSERIRTYNFA-QNRVTDHRIGLTIQKLDRILQGEMDEVIDTLVMEYQ 344


>gi|297181249|gb|ADI17443.1| protein chain release factor a [uncultured Rhodospirillales
           bacterium HF0070_31K06]
          Length = 357

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 127/349 (36%), Positives = 189/349 (54%), Gaps = 15/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ + R + L        L  +  +     +E   L   +   +E++    +   L EL
Sbjct: 7   LDSVISRHAELAALMASGDL--DAGQYADYSKEYAELSPVVEKAQELKSLREELGGLEEL 64

Query: 76  ALEEDDCSILQE-TSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
             + +  S ++E      Q ++ +V   +       L    AD   A LE+ AG GG E+
Sbjct: 65  LADPETDSEMKELAEAERQELRDQVPDIEESLRILLLPKDAADEKSAILEIRAGTGGDEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A+ L+RMY R+AE   ++TE L++ + E  G+K A L I G   +  LK E GVHR+
Sbjct: 125 ALFASDLMRMYQRYAEMHGWRTEFLDLSETELGGVKEAALSIAGRGVFARLKFESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   DS  R HTS +++ V P   + ++I+I  SD R+DTYRASGAGGQHVN TDSA+
Sbjct: 185 QRVPTTDSGGRIHTSAATVAVLP-EAEEVDIQIDTSDLRVDTYRASGAGGQHVNKTDSAI 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VVQCQ E+SQHKN+A+A  +LRA+LY+ E Q  +         KT++G G 
Sbjct: 244 RITHLPTGIVVQCQDEKSQHKNRAKAMKVLRARLYDHERQTLDAER--AADRKTQVGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       +L GD LD+ +   +A  +
Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLHKLDRILAGDELDEVVDLLIAEDQ 349


>gi|237816235|ref|ZP_04595228.1| peptide chain release factor 1 [Brucella abortus str. 2308 A]
 gi|260758776|ref|ZP_05871124.1| peptide chain release factor 1 [Brucella abortus bv. 4 str. 292]
 gi|260884577|ref|ZP_05896191.1| peptide chain release factor 1 [Brucella abortus bv. 9 str. C68]
 gi|297247116|ref|ZP_06930834.1| peptide chain release factor 1 [Brucella abortus bv. 5 str. B3196]
 gi|237788302|gb|EEP62517.1| peptide chain release factor 1 [Brucella abortus str. 2308 A]
 gi|260669094|gb|EEX56034.1| peptide chain release factor 1 [Brucella abortus bv. 4 str. 292]
 gi|260874105|gb|EEX81174.1| peptide chain release factor 1 [Brucella abortus bv. 9 str. C68]
 gi|297174285|gb|EFH33632.1| peptide chain release factor 1 [Brucella abortus bv. 5 str. B3196]
          Length = 377

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 116/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 28  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 83

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  +        +      +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 84  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 143

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 144 TLFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 203

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 204 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 262

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK    +   ++ ++++G G 
Sbjct: 263 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 319

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V++GDLD+ + A ++  +
Sbjct: 320 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQ 366


>gi|254457086|ref|ZP_05070514.1| peptide chain release factor 1 [Campylobacterales bacterium GD 1]
 gi|207085878|gb|EDZ63162.1| peptide chain release factor 1 [Campylobacterales bacterium GD 1]
          Length = 355

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 110/345 (31%), Positives = 179/345 (51%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  + R + L+     P +  ++     L +E+  L   +   KE +  +       E+
Sbjct: 6   LNPFINRYNELSELLSSPDITSDIKRMTALSKEQSSLLPIVEKAKEYKSIIKQIAETKEM 65

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E    L+    L  E  +   L   + D  +  +E+ AGAGG E+  + 
Sbjct: 66  LGDPEMIDMAKEELKELEPQIPLIEESIKLLLLPKDQNDDRNIIVELRAGAGGDEAAIFV 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L   YTR+AE + +K E L     +  G K    LIKG   Y  LK E G+HR+ R+ 
Sbjct: 126 GDLFDAYTRYAEVKGWKVELLSTSPSDAGGFKEVIALIKGDQVYSRLKYEGGIHRVQRVP 185

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P   D +E+ I+E+D +ID  R+SG GGQ VNTTDSAVRITH
Sbjct: 186 ETESQGRVHTSAITVAVMP-EVDDVEVVINENDLKIDVMRSSGCGGQSVNTTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311
           +PTG+VV  Q ++SQHKNK +A  +L+A+LY+LE+Q  E  +   E+   ++G G    +
Sbjct: 245 LPTGLVVTNQDQKSQHKNKEKAMKVLKARLYDLEMQ--EAQSKDSEARLAQVGSGDRSGR 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           IR+Y   P   + D R  +     +++++G  LD+ ++  +   +
Sbjct: 303 IRTYNY-PQNRMSDHRITLTLYRLNEIMNGGLLDEVIEPLITDHQ 346


>gi|239995055|ref|ZP_04715579.1| Protein chain release factor B, RF-2 [Alteromonas macleodii ATCC
           27126]
          Length = 248

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 158/246 (64%), Positives = 190/246 (77%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG  D ND Y+++ +G+GGTE+QDWANMLLRMY RW E   FKTE +E+ +GE AGIK
Sbjct: 1   MFSGPNDENDCYIDIQSGSGGTEAQDWANMLLRMYLRWGEAHGFKTELIEVSEGEVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SATL ++G  A+GWL+ E GVHRLVR SP+DS +RRHTSFSS +VYP +DD I+IEI+ S
Sbjct: 61  SATLRVQGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSSAFVYPEIDDDIDIEINPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQHVN TDSAVRITH PTG+VVQCQ +RSQHKNK QA   L+AKLYE
Sbjct: 121 DLRIDTYRASGAGGQHVNRTDSAVRITHEPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            ELQK+       E SK++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F
Sbjct: 181 FELQKQNAEKQAMEDSKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|148558947|ref|YP_001259697.1| peptide chain release factor 1 [Brucella ovis ATCC 25840]
 gi|265987430|ref|ZP_06099987.1| peptide chain release factor 1 [Brucella pinnipedialis M292/94/1]
 gi|148370204|gb|ABQ60183.1| peptide chain release factor 1 [Brucella ovis ATCC 25840]
 gi|264659627|gb|EEZ29888.1| peptide chain release factor 1 [Brucella pinnipedialis M292/94/1]
          Length = 377

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 116/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 28  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 83

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  +        +      +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 84  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 143

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 144 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 203

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 204 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 262

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK    +   ++ ++++G G 
Sbjct: 263 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 319

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V++GDLD+ + A ++  +
Sbjct: 320 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQ 366


>gi|320160374|ref|YP_004173598.1| peptide chain release factor 1 [Anaerolinea thermophila UNI-1]
 gi|319994227|dbj|BAJ62998.1| peptide chain release factor 1 [Anaerolinea thermophila UNI-1]
          Length = 357

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 113/339 (33%), Positives = 175/339 (51%), Gaps = 12/339 (3%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
               R   LN   E      +  +   L +ER  L+  +   +E +  L        L  
Sbjct: 7   AIESRFEELNRLLE--ENAGDYQKVIELSKERADLEPIVEKAQEYRTVLKQIEEARTLLE 64

Query: 78  EEDDCSIL---QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             D+        +      R ++  +  +   +     D  +  +E+ AG GG E+  +A
Sbjct: 65  SGDEELRELAEADLETLEPRQEVLEKELKTLLIPKDPRDERNVIVEIRAGTGGEEAALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AEKR +  E +  ++    G K    ++KG  AY  LK E GVHR+ RI 
Sbjct: 125 GDLFRMYSRYAEKRGWSVEIISQNETGIGGYKEIIFMVKGKGAYSRLKYESGVHRVQRIP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S+ R HTS +++ V     D ++I I +SD  I+ YR++GAGGQ+V    +AVRITH
Sbjct: 185 VTESSGRIHTSTATVAVLA-EVDEVDINIPDSDLEIEVYRSAGAGGQNVQKNSTAVRITH 243

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           +PTG+VV CQ ERSQ +NK +A ++LRAKLYE+E QKR++  +   + ++++G G +   
Sbjct: 244 LPTGIVVACQDERSQLQNKLRAMSILRAKLYEIEEQKRQQELD--ATRRSQVGTGERAEK 301

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   V D R  I   +   VLDG++D F+   
Sbjct: 302 IRTYNF-PQSRVTDHRIGISSYNLPAVLDGEIDLFIDEL 339


>gi|227431146|ref|ZP_03913202.1| peptide chain release factor RF1 [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227353098|gb|EEJ43268.1| peptide chain release factor RF1 [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 356

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 95/344 (27%), Positives = 169/344 (49%), Gaps = 8/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               +     LN +  DP +  N      L +E   +   +      +  + D  +  EL
Sbjct: 8   LQTVIDHYDELNEQLADPEVMNNGQHYMKLSKEAGEIRQTVEVYTRYKQVIQDIQVAEEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E    L+  K ++E + +   L     D  +  +E+   AGG ES  +A
Sbjct: 68  LGDAEMAPLAKEDLSALKPEKEQLEEQLKILMLPKDPNDDKNIIMEIRGAAGGDESSLFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LL MY R+AE++ +    ++    E  G K   ++I G N Y  LK E G HR+ R+ 
Sbjct: 128 ADLLDMYRRYAERQNWSMSIIDQSTTEVGGYKEVAIMITGGNVYSKLKFESGAHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P  ++ I+ E++ESD   + +R+ GAGGQ+VN   +AVR+ H
Sbjct: 188 ATETQGRVHTSTATVGVMPEFEE-IDFELNESDLEEEFFRSGGAGGQNVNKVSTAVRLIH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            PTG++V+ Q+ER+Q KN+ +A  +L +++Y+   Q+ E         K+ +G G    +
Sbjct: 247 KPTGIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNESE--YAAQRKSAVGTGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R  +       +++G+L + + A +   +
Sbjct: 305 IRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELGEVIDALVIADQ 347


>gi|84516322|ref|ZP_01003682.1| peptide chain release factor 1 [Loktanella vestfoldensis SKA53]
 gi|84510018|gb|EAQ06475.1| peptide chain release factor 1 [Loktanella vestfoldensis SKA53]
          Length = 351

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 115/339 (33%), Positives = 171/339 (50%), Gaps = 12/339 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  + R  FL  K  D     ++     L RE   L   +  +   +D L   +    L
Sbjct: 7   IEQIIDRFRFLEAKMSDAAHGGDIA---ALGREYAELRPVVDTVTAYKDLLAQMIDTQAL 63

Query: 76  ALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +  ++ ++    L+          Q   L    AD+  A LE+  G GG E+  +A
Sbjct: 64  LKDPEMRALAEDELPELKAALAASEHAVQLALLPKDAADARPALLEIRPGTGGDEASLFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE   ++ E LE    E  GIK     + G   +  LK E GVHR+ R+ 
Sbjct: 124 GDLLRMYQRYAENMGWRFEILEQSQTELGGIKEVVARVAGEGVFARLKYESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P     ++I+I+ +D RIDT RASG+GGQHVNTTDSAVRI H
Sbjct: 184 ETESGGRIHTSAATVAVLP-EAQDVDIQINPNDLRIDTMRASGSGGQHVNTTDSAVRILH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG++V    E+SQH+N+  A  +L+ +L++LE Q+ +         K ++G G    +
Sbjct: 243 IPTGLIV-VSAEKSQHRNREIAMQVLKTRLFDLERQRIDGER--SADRKAQVGSGDRSER 299

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   + D R N+   S   V+ GDLD  + A 
Sbjct: 300 IRTYNF-PQGRLTDHRINLTLYSLGQVMAGDLDTIIDAL 337


>gi|171779352|ref|ZP_02920316.1| hypothetical protein STRINF_01197 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281969|gb|EDT47400.1| hypothetical protein STRINF_01197 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 359

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 164/348 (47%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E       ++  +E +  L +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMALSKEEASTRETVTVYREYKQILQNIEDAEEM 66

Query: 76  ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +      L+E +    +      +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKDAGGDPELEEMAKEELKDSKAAKEDYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL+MY ++AE + +K + +E       GIK   +++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLQMYQKYAESQGWKFDVMEASYNGVGGIKEVIVMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E EI   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ +G G 
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILFDQ 350


>gi|294785988|ref|ZP_06751275.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_27]
 gi|294486325|gb|EFG33688.1| peptide chain release factor 2 [Fusobacterium sp. 3_1_27]
          Length = 308

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 147/303 (48%), Positives = 208/303 (68%), Gaps = 1/303 (0%)

Query: 53  DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112
            N +S  +++   + D  +L++     +     +      + +K ++E  +   LL GE 
Sbjct: 5   KNIVSRYEKLATEIDDEEVLIDFVESGEASFENE-LQTKHKILKSDIEEFEINLLLDGEY 63

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D N+A + +H+GAGGTE+ DWA+ML RMY RW   + +K   L+  +G+  G+KS T L+
Sbjct: 64  DMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKGYKVSELDFMEGDSVGVKSVTFLV 123

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G NAYG+LK E+GVHRLVRISP+D+N +RHTSF+S+ V P VD+++E+EI+ +D RIDT
Sbjct: 124 EGINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDENVEVEINPTDIRIDT 183

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN TDSAVRITH P+G+VV CQ+ERSQ  N+  A  ML++KL ELE++K+
Sbjct: 184 YRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQLSNRETAMKMLKSKLLELEIKKK 243

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           EE     +  +++IGWG QIRSYV QPY +VKD RTN E  +   V+DG +DDF+ + L 
Sbjct: 244 EEEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDHRTNTEIGNVKAVMDGSIDDFINSYLR 303

Query: 353 IKK 355
             K
Sbjct: 304 WIK 306


>gi|309390220|gb|ADO78100.1| bacterial peptide chain release factor 1 (bRF-1) [Halanaerobium
           praevalens DSM 2228]
          Length = 360

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 117/353 (33%), Positives = 189/353 (53%), Gaps = 18/353 (5%)

Query: 13  LFDWDNAVQRLSFL-------NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           +FD ++   +L  L       N K  DP +  +  + + L+++   L   +   KE +  
Sbjct: 1   MFDLNDLESKLDKLVAKYKQMNKKLSDPEVINDSDKYQKLLKKHAKLKKIVDKYKEYKAA 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEV 121
                   E+   +DD  +     + +  +K + E  Q       L     D  +  +E+
Sbjct: 61  KEGIAEAEEMMELDDDPEMQALFEEEIAELKPKKEKLQEQLPIMLLPDDPNDEKNVIVEI 120

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG E+  +A  L RMYTR+AE + +K + +  ++    G K     I+G + + +L
Sbjct: 121 RAGAGGDEAALFAADLYRMYTRYAEGKGWKVDLMSANESGTGGFKEIIFTIEGTDIFKYL 180

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   +S+ R HTS +++ V P   + +++EI  +D  IDT+R+SG GGQ
Sbjct: 181 KYESGVHRVQRVPSTESSGRIHTSTATVAVLP-EAEEVDVEIETNDLTIDTFRSSGPGGQ 239

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSA+RITH PTG+ V CQ E+SQHKNKA+A  +LRA+L E +   +E+     E+
Sbjct: 240 SVNTTDSAIRITHEPTGLTVSCQDEKSQHKNKAKAMKILRARLQEKKE--QEKQKERSEA 297

Query: 302 SKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            K+++G G    +IR+Y   P   V D R N+       +LDG+L+  ++A +
Sbjct: 298 RKSQVGTGDRSEKIRTYNF-PQGRVSDHRINLTIHQLDKILDGELEPVVEALI 349


>gi|307722037|ref|YP_003893177.1| bacterial peptide chain release factor 1 (bRF-1) [Sulfurimonas
           autotrophica DSM 16294]
 gi|306980130|gb|ADN10165.1| bacterial peptide chain release factor 1 (bRF-1) [Sulfurimonas
           autotrophica DSM 16294]
          Length = 355

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 109/341 (31%), Positives = 177/341 (51%), Gaps = 9/341 (2%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           + R + L+     P +  ++     L +E+  L   +   KE +  + +     E+  + 
Sbjct: 10  INRYNELSEMLSSPDITSDIKRMTELSKEQSSLLPIVEKTKEYKALIEEISDSKEMLSDP 69

Query: 80  DDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +   + +E    L+    L  E  +   L     D  +  +E+ AGAGG E+  +   L 
Sbjct: 70  EMGDMAKEELKELEPQVPLIEEEIKMLLLPKDPNDDRNIIVELRAGAGGDEAAIFVGDLF 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
             YTR+A+ + +K E +     +  G K    LIKG   Y  LK E G HR+ R+   +S
Sbjct: 130 DAYTRYADLKGWKIELMSSSPSDAGGYKEVVALIKGEQVYSRLKYEGGTHRVQRVPQTES 189

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS  ++ V P   D +EIEI+E+D +ID  R+SG GGQ VNTTDSAVRITH+P+G
Sbjct: 190 QGRVHTSAITVAVMP-EVDDVEIEINENDLKIDVMRSSGCGGQSVNTTDSAVRITHLPSG 248

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSY 315
           +VV  Q ++SQHKN+ +A  +L+A+LY+L++Q  E  A        ++G G    +IR+Y
Sbjct: 249 LVVTNQDQKSQHKNREKAMKVLKARLYDLQMQ--EAQAEDAAQRAAQVGTGDRSGRIRTY 306

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
              P   + D R N+     ++++ G  LD+ ++  +A  +
Sbjct: 307 NY-PQNRISDHRINLTLYRLNEIMSGGLLDEIIEPLIADHQ 346


>gi|308126586|ref|ZP_05911115.2| peptide chain release factor 2 [Vibrio parahaemolyticus AQ4037]
 gi|308107642|gb|EFO45182.1| peptide chain release factor 2 [Vibrio parahaemolyticus AQ4037]
          Length = 260

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 150/258 (58%), Positives = 196/258 (75%), Gaps = 1/258 (0%)

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++ ++   +F  + SG+ D++D Y+++ AG+GGTE+QDW NM+LRMY RWAE + FK E 
Sbjct: 1   MEEKLAQLEFRRMFSGDHDNSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKAEV 60

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E+ +GE AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP 
Sbjct: 61  IEVSEGEVAGLKSATVRISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPE 120

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +D++I I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK 
Sbjct: 121 IDENIAIDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKD 180

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           QA   LRAKL+ELELQK+       E +K++IGWG QIRSYVL     +KDLRT +E  +
Sbjct: 181 QAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRN 239

Query: 335 PSDVLDGDLDDFMKATLA 352
              VLDGDLD F++A+L 
Sbjct: 240 TQAVLDGDLDKFIEASLK 257


>gi|83319336|ref|YP_424135.1| peptide chain release factor 1 [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
 gi|90110051|sp|P71496|RF1_MYCCT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|83283222|gb|ABC01154.1| peptide chain release factor 1 [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
          Length = 363

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 118/347 (34%), Positives = 182/347 (52%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---LCDNLIL 72
            +   +RL  +    ED ++ +++ +   L +E+ +L+  +    E +     + D   +
Sbjct: 9   LETMQKRLFQIQKDLEDENILKDIKKFTELNKEKANLEEVVEKFVEYKKAVDHIKDAKAI 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LE   + +   + +   D        ++   +   L     D  +  +E+   AGG E+ 
Sbjct: 69  LENEKDSELIELAKIELDENNDKVEHLQQVIEEMLLPKDPNDEKNVIIEIRGAAGGDEAN 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY  +AE + +K   LE   GE  G      +IKG   Y  LK E G HR+ 
Sbjct: 129 IFAGDLLRMYKLYAETQNWKINILEASLGEAGGYSQVVFMIKGDRVYSKLKFESGAHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R  TS +++ V P     +EIEI  +D RIDTYRASGAGGQHVNTTDSAVR
Sbjct: 189 RVPKTEAKGRIQTSTATVAVLP-EMSEVEIEIRSNDLRIDTYRASGAGGQHVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV  Q  RSQH NK  A  MLRAK+YE E++K++  A+   + K  +G G  
Sbjct: 248 ITHLPTGIVVTSQDGRSQHDNKDIAMTMLRAKVYEAEVEKQQAQAD--ATRKNAVGTGAR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       V++G++D+F+ A +  ++
Sbjct: 306 SEKIRTYNY-PQNRVTDHRVGLTLNKLDQVMEGNIDEFIIALINEEQ 351


>gi|110598269|ref|ZP_01386544.1| peptide chain release factor 1 [Chlorobium ferrooxidans DSM 13031]
 gi|110340077|gb|EAT58577.1| peptide chain release factor 1 [Chlorobium ferrooxidans DSM 13031]
          Length = 357

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 105/352 (29%), Positives = 173/352 (49%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D   +  ++   L     DP+   +    + L +E   L   +           +   
Sbjct: 1   MLDKLQSIKEKHLDLEQLLADPNAATDQARFRKLNKEYSDLREIVQAYDAYGQAKTELDQ 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             +L   E D  + +     +  ++ ++   +       L   EADS +  +E+ AG GG
Sbjct: 61  SKKLLDSESDPEMRELVQAEISELQKKLPELEQHLKVLLLPKDEADSRNVIVEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNAYGWLKGEQG 186
            E+  +A  +LRMY R+AEK+ +K E L  ++     G +  TL + G + YG +K E G
Sbjct: 121 EEAALFAADILRMYQRYAEKQGWKCEVLHYNESSMPGGFREITLEVSGHDVYGTMKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS  S+ V P   + +++EI   D R DTYR+ G GGQ+VN  
Sbjct: 181 VHRVQRVPDTETQGRIHTSAVSVAVLP-EAEEVDVEIRREDLRFDTYRSGGKGGQNVNKV 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++AVRITH+PTG+V  CQ+ERSQ +NK +A  MLR KLY++ L ++ +        ++ +
Sbjct: 240 ETAVRITHMPTGIVSACQEERSQLQNKERAMKMLRTKLYDILLAEQVQQRADL--RRSMV 297

Query: 307 GWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             G +   IR+Y   P   V D R      +   +L G++ D + A     +
Sbjct: 298 TTGDRSAKIRTYNY-PQSRVTDHRIGFTSHALPQILQGEIQDIIDALKMHDQ 348


>gi|237743972|ref|ZP_04574453.1| peptide chain release factor 2 [Fusobacterium sp. 7_1]
 gi|256027415|ref|ZP_05441249.1| peptide chain release factor 2 [Fusobacterium sp. D11]
 gi|289765378|ref|ZP_06524756.1| peptide chain release factor 2 [Fusobacterium sp. D11]
 gi|229433003|gb|EEO43215.1| peptide chain release factor 2 [Fusobacterium sp. 7_1]
 gi|289716933|gb|EFD80945.1| peptide chain release factor 2 [Fusobacterium sp. D11]
          Length = 308

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 148/303 (48%), Positives = 208/303 (68%), Gaps = 1/303 (0%)

Query: 53  DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112
            N +S  +++   + D  +L++     +     + +    + +K +VE  +   LL GE 
Sbjct: 5   KNIVSRYEKLATEIEDEEVLIDFVESGETSFESELSE-KHKILKNDVEEFEINLLLDGEY 63

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D N+A + +H+GAGGTE+ DWA+ML RMY RW   + +K   L+  +G+  G+KS T L+
Sbjct: 64  DMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKNYKVTELDFMEGDSVGVKSVTFLV 123

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G NAYG+LK E+GVHRLVRISP+D+N +RHTSF+S+ V P VD+++E+EI  +D RIDT
Sbjct: 124 EGINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDENVEVEIDPADIRIDT 183

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN TDSAVRITH P+G+VV CQ+ERSQ  N+  A  ML++KL ELE++K+
Sbjct: 184 YRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQLSNRETAMKMLKSKLLELEIKKK 243

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           EE     +  +++IGWG QIRSYV QPY +VKD RTN E  +   V+DG +DDF+ + L 
Sbjct: 244 EEEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDHRTNTEIGNVKAVMDGSIDDFINSYLR 303

Query: 353 IKK 355
             K
Sbjct: 304 WIK 306


>gi|86152274|ref|ZP_01070485.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|121613478|ref|YP_001001255.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|148925756|ref|ZP_01809444.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|157415831|ref|YP_001483087.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           81116]
 gi|166223544|sp|A1W1L4|RF1_CAMJJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|172047202|sp|A8FNS3|RF1_CAMJ8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|85840763|gb|EAQ58014.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|87249710|gb|EAQ72669.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|145845766|gb|EDK22857.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|157386795|gb|ABV53110.1| peptide chain release factor RF-1 [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|307748468|gb|ADN91738.1| Peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           M1]
 gi|315931656|gb|EFV10617.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           327]
          Length = 355

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 114/345 (33%), Positives = 179/345 (51%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  ++R   LN+      +  ++ +   L +E+++L+  +   KE    L +      L
Sbjct: 6   LDPFLKRFEELNSLLSSSDILNDISKMTTLSKEQKNLEPIVLKAKEYLKTLDNIEENKAL 65

Query: 76  ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +      +E     +      E  +   L     D  + +LE+ AG GG E+  + 
Sbjct: 66  LNDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGTGGDEASLFV 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L++ Y R+AE R +K E +   +G   G K   +L+KG  AY  LK E G HR+ R+ 
Sbjct: 126 GDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHRVQRVP 185

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P   D IEIEI+ +D ++D  R+SG GGQ VNTTDSAVRITH
Sbjct: 186 QTESQGRVHTSAITVAVMP-EVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV  Q  +SQHKNK  A  +L+A+LY  E+Q+ E +A   E+ K+++G G    +
Sbjct: 245 IPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQESERLAKESEARKSQVGSGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++ DG  D+ ++  +   +
Sbjct: 303 IRTYNF-PQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQ 346


>gi|28897286|ref|NP_796891.1| peptide chain release factor 2 [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153839363|ref|ZP_01992030.1| peptide chain release factor 2 [Vibrio parahaemolyticus AQ3810]
 gi|308094351|ref|ZP_05888606.2| peptide chain release factor 2 [Vibrio parahaemolyticus AN-5034]
 gi|308095310|ref|ZP_05904925.2| peptide chain release factor 2 [Vibrio parahaemolyticus Peru-466]
 gi|308125643|ref|ZP_05776404.2| peptide chain release factor 2 [Vibrio parahaemolyticus K5030]
 gi|28805495|dbj|BAC58775.1| peptide chain release factor 2 [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149747111|gb|EDM58099.1| peptide chain release factor 2 [Vibrio parahaemolyticus AQ3810]
 gi|308088411|gb|EFO38106.1| peptide chain release factor 2 [Vibrio parahaemolyticus Peru-466]
 gi|308093009|gb|EFO42704.1| peptide chain release factor 2 [Vibrio parahaemolyticus AN-5034]
 gi|308113324|gb|EFO50864.1| peptide chain release factor 2 [Vibrio parahaemolyticus K5030]
          Length = 260

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 151/258 (58%), Positives = 196/258 (75%), Gaps = 1/258 (0%)

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++ ++   +F  + SG+ DS+D Y+++ AG+GGTE+QDW NM+LRMY RWAE + FK E 
Sbjct: 1   MEEKLAQLEFRRMFSGDHDSSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKAEV 60

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E+ +GE AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP 
Sbjct: 61  IEVSEGEVAGLKSATVRISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPE 120

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +D++I I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK 
Sbjct: 121 IDENIAIDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKD 180

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           QA   LRAKL+ELELQK+       E +K++IGWG QIRSYVL     +KDLRT +E  +
Sbjct: 181 QAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRN 239

Query: 335 PSDVLDGDLDDFMKATLA 352
              VLDGDLD F++A+L 
Sbjct: 240 TQAVLDGDLDKFIEASLK 257


>gi|229823150|ref|ZP_04449219.1| hypothetical protein GCWU000282_00447 [Catonella morbi ATCC 51271]
 gi|229787316|gb|EEP23430.1| hypothetical protein GCWU000282_00447 [Catonella morbi ATCC 51271]
          Length = 359

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 111/351 (31%), Positives = 176/351 (50%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  D  + R   L+    DP +  +    + L  E   L   ++ IK  +    +   
Sbjct: 1   MFEQLDALIFRFEELHELLSDPEVISDSKRLRELTIEEADLSPKVAKIKRYKQVQQEIKD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGG 127
             E+  E  D  + +     L  +K E    + E     L     D  +  +E+   AGG
Sbjct: 61  TEEMLGEGLDADMAELAKMELAELKAEKPRLEEEIKVMMLPEDPNDGKNIIMEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+Q +A  LL MYTR+A+ + +K E L+ +     G K  +L+I G   Y  LK E G 
Sbjct: 121 DEAQLFAGDLLNMYTRYADSQGWKVEVLDANITGIGGYKEVSLMITGHKVYSKLKFENGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +++++ ++D R+D Y ASGAGGQHVN T 
Sbjct: 181 HRVQRVPETESQGRVHTSTATVVVMP-EAEEVDLDLKDADIRVDIYHASGAGGQHVNKTA 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTGVVV  Q ERSQ KN+ +A  +LRA++Y++   + E  A    + K  +G
Sbjct: 240 SAVRLTHLPTGVVVAMQDERSQLKNREKAMKVLRARVYDML--QSEAQAEYDSNRKLAVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       ++ G LD+ +   +   +
Sbjct: 298 TGDRSERIRTYNY-PQNRVTDHRIGLTIQQLDAIMSGKLDEIIDGLVLFDQ 347


>gi|329965246|ref|ZP_08302176.1| peptide chain release factor 1 [Bacteroides fluxus YIT 12057]
 gi|328523266|gb|EGF50366.1| peptide chain release factor 1 [Bacteroides fluxus YIT 12057]
          Length = 370

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 97/354 (27%), Positives = 166/354 (46%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   ++T   DP +  +      L +E + L + ++  KE    L       E+
Sbjct: 11  LEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMNARKEYMQILSGIEEAKEI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L   +      +       + +   DS +A LE+  G GG E+ 
Sbjct: 71  MANETDPEMREMAREELDTCQSRQPELEEQIKLLLVPADPQDSRNAILEIRGGTGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYT++ E + ++ E    ++G   G K     I G   YG +K E GVHR+ 
Sbjct: 131 IFAGDLFRMYTKYCETKGWRMEISSANEGSAGGFKEIVCSITGDGVYGTMKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P  ++   + I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +            ++++C + R Q KNK +A + LR  +Y+ E QK   I +I    K
Sbjct: 250 LRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRK 307

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T +  G +   IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360


>gi|269121056|ref|YP_003309233.1| peptide chain release factor 1 [Sebaldella termitidis ATCC 33386]
 gi|268614934|gb|ACZ09302.1| peptide chain release factor 1 [Sebaldella termitidis ATCC 33386]
          Length = 359

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 120/351 (34%), Positives = 192/351 (54%), Gaps = 11/351 (3%)

Query: 13  LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F   D+ V++   L     DP +  +  +     +    +++ +   K  +D+  +   
Sbjct: 1   MFQKLDDVVKKHEELTQLLMDPVVTSDPKKIMEYNKALNSINDVVEKYKYYKDKKEELAS 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGG 127
           L E    E D  + +   + ++ ++ E+       +   L     D  +  +E+ AGAGG
Sbjct: 61  LKEDLKNEKDNEMKEMILEEIKNVEEEIPNIEEELKILLLPQDPNDEKNVIMEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RM++R+AE+ K+K E ++ +D    G+K    LIKG  AY  LK E GV
Sbjct: 121 DEAALFAYDVFRMFSRYAERNKWKVEVIDRNDIGVGGLKEIVFLIKGKGAYSKLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S+ R HTS  ++ V P +DD  ++EI+  D ++DTYRASGAGGQHVNTTD
Sbjct: 181 HRVQRVPDTESSGRIHTSTITVAVLPEIDDVSQVEINPGDLKVDTYRASGAGGQHVNTTD 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG+VV  Q ERSQ KN+ +A  +L +K+YE+E++++ +        + ++G
Sbjct: 241 SAVRITHIPTGIVVTSQDERSQLKNRERAMKVLASKIYEMEVEEQRKTVE--SERRLQVG 298

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       VLDGDL + + A  A  +
Sbjct: 299 SGDRSEKIRTYNF-PQGRVTDHRIKLTLHKLDQVLDGDLVELIDALTAYAQ 348


>gi|83859678|ref|ZP_00953198.1| peptide chain release factor 1 [Oceanicaulis alexandrii HTCC2633]
 gi|83852037|gb|EAP89891.1| peptide chain release factor 1 [Oceanicaulis alexandrii HTCC2633]
          Length = 357

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 110/348 (31%), Positives = 174/348 (50%), Gaps = 16/348 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   +  +        +  E   L +E   L       +E++           +
Sbjct: 8   LDQVIDRFDQVEARLSA---AADPDEIVKLSKEHAELKLVAEKARELKTARESFEEAEAI 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  +++   +  Q +K  +   +       +     D     LE+ AG GG E+ 
Sbjct: 65  IEDGSDRDMVELAEEERQELKKRLPGLERELQLLLIPKDRDDDASIMLEIRAGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A    +K + +E  + E  G K     + G   +G +K E GVHR+ 
Sbjct: 125 LFAGDLFRMYERYASNHGWKVDVVEASEAEVGGYKEIVASVSGKGVFGKMKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   +++EI+I + D RIDT RASGAGGQHVN T+SAVR
Sbjct: 185 RVPVTESGGRIHTSAATVAVLP-EPENVEIDIKDEDIRIDTMRASGAGGQHVNKTESAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+VV    E+SQH+N+A A  +L+A+LYE E ++++E        K ++G G  
Sbjct: 244 MTHIPTGIVV-VSSEKSQHQNRAIAMQVLKARLYEKERREKDEAR--AAERKGQVGSGDR 300

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
             +IR+Y   P   V D R N+      ++L GD LD+ + A L+  +
Sbjct: 301 SERIRTYNF-PQGRVSDHRINLTLYKLDEILSGDALDEVIDALLSEDQ 347


>gi|332531395|ref|ZP_08407299.1| hypothetical protein HGR_15544 [Hylemonella gracilis ATCC 19624]
 gi|332039064|gb|EGI75486.1| hypothetical protein HGR_15544 [Hylemonella gracilis ATCC 19624]
          Length = 248

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 141/247 (57%), Positives = 185/247 (74%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + +  AD   A+L++ AGAGGTE+ DWA+MLLR Y ++AE++ FK    +   G+ AGIK
Sbjct: 1   MFNNPADPLPAFLDIQAGAGGTEACDWASMLLRQYLKYAERKGFKATVEDETPGDTAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ I+G  A+G L+ E GVHRLVR SP+DS+  RHTSF+SI+VYP +DD+IEIEI+ +
Sbjct: 61  SATIKIEGDYAFGLLRTETGVHRLVRKSPFDSSGGRHTSFASIFVYPEIDDTIEIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R DT+RASGAGGQH+N TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+
Sbjct: 121 DVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYD 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E++KR E     E +KT++GWG QIRSYVL     +KDLRTN E ++   VLDGDLD F
Sbjct: 181 FEMRKRMEEQQKLEDTKTDVGWGHQIRSYVLD-QSRIKDLRTNYETSATQKVLDGDLDPF 239

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 240 IEASLKQ 246


>gi|295397091|ref|ZP_06807203.1| peptide chain release factor RF1 [Aerococcus viridans ATCC 11563]
 gi|294974683|gb|EFG50398.1| peptide chain release factor RF1 [Aerococcus viridans ATCC 11563]
          Length = 357

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 104/347 (29%), Positives = 171/347 (49%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72
            D+ + R + +     DP +  +    + + +E   L   +      +     + D   L
Sbjct: 6   LDSFIARYAEVTELMSDPDVINDNQRFRAISKEEADLRPKVETFSHYKDVIQAIEDTEEL 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L  + +++   + +E    L+  +    E  +   + S   D  +  +E+   AGG E+Q
Sbjct: 66  LAESSDDEMTELAKEELKELKAERESLEEEIKRLMIPSDPNDDKNIIMEIRGAAGGDEAQ 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY+R+A  + ++ E +E    +  G K  TL I+G   Y  LK E G HR+ 
Sbjct: 126 LFAGDLYEMYSRYATSQGWRVEVIESSSNDIGGFKEITLQIQGDKVYSKLKFESGAHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + I+ ++ E D RID YRASGAGGQHVN T SAVR
Sbjct: 186 RVPDTESQGRVHTSTATVGVMP-ELEDIDFDLDEGDIRIDIYRASGAGGQHVNKTSSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH PTG+ V  Q +RSQ +NK +A  +LR+++YE    +++         K  +G G  
Sbjct: 245 LTHEPTGIQVAMQDQRSQQQNKDKAMMILRSRVYEKIASEQQNE--YDSQRKNLVGTGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       ++ G+LD+ + A L   +
Sbjct: 303 SERIRTYNY-PQNRVTDHRIGLTIQKLDRIMTGELDEIVDALLLADQ 348


>gi|256384120|gb|ACU78690.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. capri
           str. GM12]
 gi|256384952|gb|ACU79521.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. capri
           str. GM12]
 gi|296455380|gb|ADH21615.1| peptide chain release factor 1 [synthetic Mycoplasma mycoides
           JCVI-syn1.0]
          Length = 364

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 181/347 (52%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +RL  +    ED ++ +++ +   L +E+ +L+  +    E +  +        +
Sbjct: 9   LETMQKRLLQILKDLEDENILKDIKKFTELNKEKSNLEEVVEKFVEYKQAVEHIKDAKVI 68

Query: 76  ALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++           +++   +  +   L     D  +  +E+   AGG E+ 
Sbjct: 69  LENEKDQELIELAKIELDENNDKVEHLQQVIEEMLLPKDPNDDKNVIVEIRGAAGGDEAN 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY  +AE + +K   LE   GE  G      +IKG   Y  LK E G HR+ 
Sbjct: 129 IFAGDLLRMYKLYAETQNWKINILEASVGEAGGYSQVVFMIKGDRVYSKLKFESGAHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R  TS +++ V P     +EIEI  +D RIDTYRASGAGGQHVNTTDSAVR
Sbjct: 189 RVPKTEAKGRIQTSTATVAVLP-EMSEVEIEIRSNDLRIDTYRASGAGGQHVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV  Q  RSQH NK  A  MLRAK+YE E++K++  A+   + K  +G G  
Sbjct: 248 ITHLPTGIVVTSQDGRSQHDNKDIAMTMLRAKVYEAEVEKQQAQAD--ATRKNAVGTGAR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       V++G++D+F+ A +  ++
Sbjct: 306 SEKIRTYNY-PQNRVTDHRVGLTLNKLDQVMEGNIDEFIIALINEEQ 351


>gi|163746457|ref|ZP_02153815.1| peptide chain release factor 1 [Oceanibulbus indolifex HEL-45]
 gi|161380342|gb|EDQ04753.1| peptide chain release factor 1 [Oceanibulbus indolifex HEL-45]
          Length = 351

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 170/341 (49%), Gaps = 12/341 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                QR  FL           +  +   L +E   L   +  I   Q    D     E+
Sbjct: 7   LAQISQRFQFLEASMSAG---SDGADFAALAKEYSDLKPVVDQIDLYQQLQRDLEEAQEM 63

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E    L+          Q   L    AD+  A LE+  G GG E+  +A
Sbjct: 64  LKDPEMAELAREELPRLRARLPEVEGALQLALLPRDAADAKPAMLEIRPGTGGDEAALFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE R +  + +E    E  G+K     I G N +  LK E GVHR+ R+ 
Sbjct: 124 GDLLRMYQRYAEARGWGFDLIESQMTELGGVKEVVAHITGQNVFARLKFESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++IEI+ +D RIDT R+SGAGGQHVNTTDSAVRITH
Sbjct: 184 STESGGRIHTSAATVAVLP-EAEDVDIEINANDLRIDTMRSSGAGGQHVNTTDSAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV    E+SQH+N+ +A  +L+A+LY++E  + +           ++G G    +
Sbjct: 243 IPTGIVVTSS-EKSQHRNRDKAMQVLKARLYDMERGRIDSER--SADRAAQVGSGDRSER 299

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       V+ GDLD+ + A  A
Sbjct: 300 IRTYNF-PQGRMTDHRINLTLYRLEAVMQGDLDEIIDALTA 339


>gi|182435969|ref|YP_001823688.1| peptide chain release factor 1 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326776593|ref|ZP_08235858.1| Peptide chain release factor 1 [Streptomyces cf. griseus XylebKG-1]
 gi|238689014|sp|B1W0B6|RF1_STRGG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|178464485|dbj|BAG19005.1| putative peptide chain release factor 1 [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326656926|gb|EGE41772.1| Peptide chain release factor 1 [Streptomyces cf. griseus XylebKG-1]
          Length = 358

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 114/354 (32%), Positives = 176/354 (49%), Gaps = 16/354 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +  +   + L  K  DP +  +   A+ L +    L   +S  +  +    D   
Sbjct: 1   MFEAVEELIGEHTGLEKKLADPSVHADQANARKLNKRYAELTPIVSTYRAWKQTGEDIET 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E     DD     E  +  ++ +   E  +   +    +D  D  LE+ AGAGG ES 
Sbjct: 61  AREF--AADDPDFAAEVKELEKQREEITEKLRLLLVPRDPSDDKDVLLEIKAGAGGDESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG----------PNAYGWL 181
            +A  LLRMY R+AE+  +KTE ++  + E  G K   + +K              +  +
Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVAVKTKGGNGATEPGQGVWARM 178

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   +S  R HTS + + V P   + +++EI  +D RID YR+SG GGQ
Sbjct: 179 KYEGGVHRVQRVPSTESQGRIHTSAAGVLVTP-EAEEVDVEIHANDLRIDVYRSSGPGGQ 237

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR++L     +  E+ A+    
Sbjct: 238 SVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEAAEQEASDVRR 297

Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           S+   +    +IR+Y   P   + D R   +  +   VLDG+LD  ++A +   
Sbjct: 298 SQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGELDAVIQACVDAD 350


>gi|304373116|ref|YP_003856325.1| Peptide chain release factor 1 [Mycoplasma hyorhinis HUB-1]
 gi|304309307|gb|ADM21787.1| Peptide chain release factor 1 [Mycoplasma hyorhinis HUB-1]
          Length = 361

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 111/349 (31%), Positives = 176/349 (50%), Gaps = 6/349 (1%)

Query: 11  GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---L 66
             + +  ++  ++   L+ +  DP +  N+ E   + +E   +++ +   K    +   +
Sbjct: 3   KSMLNSLNSIKEKYEHLSNQLLDPEIVSNIKEYTKINKELASIEDIVLAFKNYLKQVSII 62

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D+  LL+    E      +E +   ++I+   +      L   E D  +  +E+   AG
Sbjct: 63  EDSKKLLQEKDVEIHNLAKEEITLATKKIEEIEKELVVLLLPKDENDDKNVIVEIRGAAG 122

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +   L +MY +WAE +K+  + L        G      L+ G   Y  LK E G
Sbjct: 123 GDEANIFVGDLYKMYLKWAESKKWSVKVLNSSLASAGGFTQIVFLVSGDKVYSKLKFESG 182

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ RI   ++  R HTS +++ + P VDD I+++I   D RIDTYR+SGAGGQ VNTT
Sbjct: 183 VHRVQRIPETETQGRVHTSTTTVTIMPEVDDDIQVDIKAQDLRIDTYRSSGAGGQSVNTT 242

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPTG+V   Q  RSQ  NK  A  +L++K+Y LE++K++ I           
Sbjct: 243 DSAVRITHIPTGLVSTSQDGRSQIANKELALKILKSKIYNLEVEKKQAIEGQFRKLAGSG 302

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R +   +   +V+ G+LD  + A LA  K
Sbjct: 303 ARSEKIRTYNY-PQDRVTDHRISFSTS-LKNVIVGNLDPIIDALLAEDK 349


>gi|313899685|ref|ZP_07833188.1| peptide chain release factor 1 [Clostridium sp. HGF2]
 gi|312955300|gb|EFR36965.1| peptide chain release factor 1 [Clostridium sp. HGF2]
          Length = 357

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 174/346 (50%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
            +  V R   +N     P +  +      L RE+  L   +    E ++    L D   L
Sbjct: 8   LEGMVNRYHEINEMMMSPEIVTDSRMLAKLGREQADLTQVVETYTEYKNSVSALEDAKAL 67

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L    +E       E  +   +I+  +E  +   +     DS++A +E+   AGG E   
Sbjct: 68  LLEDDKEIKEMAKMEIEELEPKIEEYLEKLEILLIPKDPNDSHNAIVEIRGAAGGDEGNI 127

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AE + +K E +E+ D E  G    + ++KG   YG LK E G HR+ R
Sbjct: 128 FAGDLYRMYSKFAESQGWKIEIVEMDDCEAGGFSLVSFMVKGDGVYGKLKFESGSHRVQR 187

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P   +  + +I  +D  ++T RASGAGGQH+N TDSAVRI
Sbjct: 188 VPKTESQGRIHTSTATVLVTP-EIEPEDFDIDMNDLEMETMRASGAGGQHINKTDSAVRI 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
            H PTG+ V+CQ  RSQH+N+A A   +R+++YE   +K EE   I    + +IG G   
Sbjct: 247 VHKPTGITVKCQDGRSQHENRATALMTIRSRVYEEHQRKLEEEQGI--ERRNKIGTGDRA 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R          +++G + D + A L+  +
Sbjct: 305 EKIRTYNY-PQNRVTDHRIGYTVNQLDRIMEGRMQDLLDALLSADQ 349


>gi|256112206|ref|ZP_05453127.1| peptide chain release factor 1 [Brucella melitensis bv. 3 str.
           Ether]
          Length = 359

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 115/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 10  DQLLKRFSMIESQMANNP----DSDSYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  +        +      +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 66  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 126 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 186 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK    +   ++ ++++G G 
Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V++G+LD+ + A ++  +
Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGELDELVDALISDHQ 348


>gi|260467160|ref|ZP_05813338.1| peptide chain release factor 1 [Mesorhizobium opportunistum
           WSM2075]
 gi|259029084|gb|EEW30382.1| peptide chain release factor 1 [Mesorhizobium opportunistum
           WSM2075]
          Length = 359

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 115/348 (33%), Positives = 185/348 (53%), Gaps = 18/348 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  V+R   L  +    P           +  E   L   ++ ++ ++    +   L  +
Sbjct: 10  DQVVKRFEMLEAQMSAGPA----PDAYVKMASEYAELQEMVAKVRALRSAEHEQADLEAM 65

Query: 76  ALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             ++   + ++  ++       +RI+   +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 66  LADKGTDAEMRALAEADLPGVEERIEALQKDIQLLLLPRDAADDKNAILEIRAGTGGDEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A +  ++ E +   DG+  G K     I G   +  LK E GVHR+
Sbjct: 126 ALFAGDLFRMYERYAAEHGWRFETVSASDGDAGGFKEIIATISGRGVFAHLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +++ R HTS +++ V P   + ++I+I   D RIDT RASG+GGQHVNTTDSAV
Sbjct: 186 QRVPATEASGRIHTSAATVAVLP-EAEEVDIDIRAEDIRIDTMRASGSGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG++V  Q E+SQH+N+A+A  +LRA+LY++E  K +E     E+ K+++G G 
Sbjct: 245 RITHLPTGIMV-VQAEKSQHQNRAKAMQILRARLYDMERSKADEER--SEARKSQVGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V+ G+LD+ + A +A  +
Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMMGELDEVIDALIADHQ 348


>gi|331703153|ref|YP_004399840.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. capri LC
           str. 95010]
 gi|328801708|emb|CBW53861.1| Peptide chain release factor 1 [Mycoplasma mycoides subsp. capri LC
           str. 95010]
          Length = 364

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 181/347 (52%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +RL  +    ED ++ +++ +   L +E+ +L+  +    E +  +        +
Sbjct: 9   LETMQKRLLQILKDLEDENILKDIKKFTELNKEKSNLEEVVEKFVEYKQAVEHIKDAKAI 68

Query: 76  ALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++           +++   +  +   L     D  +  +E+   AGG E+ 
Sbjct: 69  LENEKDQELIELAKIELDENNDKVEHLQQVIEEMLLPKDPNDDKNVIVEIRGAAGGDEAN 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY  +AE + +K   LE   GE  G      +IKG   Y  LK E G HR+ 
Sbjct: 129 IFAGDLLRMYKLYAETQNWKINILEASVGEAGGYSQVVFMIKGDRVYSKLKFESGAHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R  TS +++ V P     +EIEI  +D RIDTYRASGAGGQHVNTTDSAVR
Sbjct: 189 RVPKTEAKGRIQTSTATVAVLP-EMSEVEIEIRSNDLRIDTYRASGAGGQHVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV  Q  RSQH NK  A  MLRAK+YE E++K++  A+   + K  +G G  
Sbjct: 248 ITHLPTGIVVTSQDGRSQHDNKDIAMTMLRAKVYEAEVEKQQAQAD--ATRKNAVGTGAR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       V++G++D+F+ A +  ++
Sbjct: 306 SEKIRTYNY-PQNRVTDHRVGLTLNKLDQVMEGNIDEFIIALINEEQ 351


>gi|291514939|emb|CBK64149.1| bacterial peptide chain release factor 1 (bRF-1) [Alistipes shahii
           WAL 8301]
          Length = 361

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 108/346 (31%), Positives = 169/346 (48%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI---- 71
            D    +      K  DP +  +V +   L +E + L+  I   +  +  + +       
Sbjct: 10  LDGLKLKYEETGQKLTDPEVIADVKQFIQLTKEYKELEPIIETSERYRTAIANLAEAKDT 69

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L     EE      +  ++   ++    E  +   +     DS +A +E+  G GG E+ 
Sbjct: 70  LATDKDEEMREMAREMIAELEPQLAQMEEEIKLLLIPKDPQDSKNAIVEIRGGTGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMYT++ E + ++ E     DG   G K   L + G N YG LK E GVHR+ 
Sbjct: 130 IFAGDLLRMYTKYIESKGWRYEITSSSDGAAGGFKEVVLKVSGQNVYGTLKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P  ++     IS +D R D + ASG GGQ VNTT SA+R
Sbjct: 190 RVPQTETQGRVHTSAASVAVLPEAEEFDIE-ISMNDIRKDIFCASGPGGQSVNTTYSAIR 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +THIPTG+VVQCQ ++SQ KN  +A+  LR +++ LE  K  +   I    KT +  G +
Sbjct: 249 LTHIPTGIVVQCQDQKSQLKNFDKAFEELRTRVFNLEYSKYLDE--IASKRKTMVSTGDR 306

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 307 SAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 351


>gi|256850891|ref|ZP_05556280.1| peptide chain release factor 1 [Lactobacillus jensenii 27-2-CHN]
 gi|260661105|ref|ZP_05862019.1| peptide chain release factor 1 [Lactobacillus jensenii 115-3-CHN]
 gi|282934197|ref|ZP_06339475.1| peptide chain release factor 1 [Lactobacillus jensenii 208-1]
 gi|297205768|ref|ZP_06923163.1| peptide chain release factor RF1 [Lactobacillus jensenii JV-V16]
 gi|256615953|gb|EEU21141.1| peptide chain release factor 1 [Lactobacillus jensenii 27-2-CHN]
 gi|260548042|gb|EEX24018.1| peptide chain release factor 1 [Lactobacillus jensenii 115-3-CHN]
 gi|281301811|gb|EFA94077.1| peptide chain release factor 1 [Lactobacillus jensenii 208-1]
 gi|297148894|gb|EFH29192.1| peptide chain release factor RF1 [Lactobacillus jensenii JV-V16]
          Length = 362

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 99/343 (28%), Positives = 170/343 (49%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   +     DP +  +      + +E   +   +   ++ Q+         E+
Sbjct: 8   LEGLVARYEEIQELMADPEVINDTKRYMEISKEEADMREVVQKYRKYQEDQKTISDNKEI 67

Query: 76  ALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++   +      + +    E  +   L     D  D  +E+   AGG E+ 
Sbjct: 68  IENESDEDLVEMAKEENSDLEKEVAELEEEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE + +K   ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAETQGWKISVIDEETTEVGGYKHVAIMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + ++I++   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMP-EYEQVDIDLDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q +RSQ +N+A+A  +L++++Y+    + +  A+  E  K  +G G  
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQNQ--ASYDEKRKNAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   V D R  +       +++G+LD+ + A +
Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIISALI 346


>gi|255326261|ref|ZP_05367347.1| peptide chain release factor 1 [Rothia mucilaginosa ATCC 25296]
 gi|283458332|ref|YP_003362953.1| protein chain release factor A [Rothia mucilaginosa DY-18]
 gi|255296715|gb|EET76046.1| peptide chain release factor 1 [Rothia mucilaginosa ATCC 25296]
 gi|283134368|dbj|BAI65133.1| protein chain release factor A [Rothia mucilaginosa DY-18]
          Length = 360

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 111/350 (31%), Positives = 179/350 (51%), Gaps = 11/350 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+     +   + L  +  DP +  N  +A+ + R    L   ++   +      D   
Sbjct: 1   MFESIQVLLDEHADLQNQLADPAVQANQGKARRVGRRYAELTGIVTAYNKYTSLKDDLEA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E+A E+ D +      +     ++  E  +   +     D  +  LEV AGAGG E+ 
Sbjct: 61  AREMADEDPDFAAEIPGLEEEL--EVAQEKLRRLLIPRDPDDGRNVILEVKAGAGGDEAA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI------KGPNAYGWLKGEQ 185
            +A  LLRMY R+AE + +KTE +     +  G K A + I           +  LK E 
Sbjct: 119 LFAGDLLRMYMRYAEHKGWKTEIISSTSTDVGGYKDAQIAIKGSSNEPAEGVWAHLKYEG 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS + + V+P VD+  EIEI+++D +ID YR+SG GGQ VNT
Sbjct: 179 GVHRVQRVPATESQGRIHTSAAGVLVFPEVDEPEEIEINQNDLKIDVYRSSGPGGQSVNT 238

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PTG+VV  Q E+SQ +N+  A  +LRA+L   + ++ +       +S+  
Sbjct: 239 TDSAVRITHLPTGIVVAMQNEKSQLQNREAAMRVLRARLLAHQQEQIDAENAAHRASQVR 298

Query: 306 -IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +    +IR+Y   P   + D RT  +  +   VL+GDL+  +++ + + 
Sbjct: 299 TMDRSERIRTYNF-PENRIADHRTGYKAYNLDAVLNGDLEPVVQSAIEMD 347


>gi|42560702|ref|NP_975153.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. mycoides
           SC str. PG1]
 gi|61214633|sp|Q6MU89|RF1_MYCMS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|42492198|emb|CAE76795.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. mycoides
           SC str. PG1]
 gi|301320433|gb|ADK69076.1| peptide chain release factor 1 [Mycoplasma mycoides subsp. mycoides
           SC str. Gladysdale]
          Length = 364

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 115/347 (33%), Positives = 180/347 (51%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +RL  +    ED ++ +++ +   L +E+ +L+  +    E +  +        +
Sbjct: 9   LETMQKRLLQILKDLEDENILKDIKKFTELNKEKSNLEEVVEKFVEYKKAVEHIKDAKAI 68

Query: 76  ALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++           +++   +  +   L     D  +  +E+   AGG E+ 
Sbjct: 69  LENEKDQELIELAKIELDENNDKVEHLQQVIEEMLLPKDPNDDKNVIVEIRGAAGGDEAN 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY  +AE + +K   LE   GE  G      +IKG   Y  LK E G HR+ 
Sbjct: 129 IFAGDLLRMYKLYAETQNWKINILEASVGEAGGYSQVVFMIKGDRVYSKLKFESGAHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R  TS +++ V P     +EIEI  +D RIDTYRASGAGGQHVNTTDSAVR
Sbjct: 189 RVPKTEAKGRIQTSTATVAVLP-EMSEVEIEIRSNDLRIDTYRASGAGGQHVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV  Q  RSQH NK  A  MLR K+YE E++K++  A+   + K  +G G  
Sbjct: 248 ITHLPTGIVVTSQDGRSQHDNKDIAMTMLRTKVYEAEVEKQQAQAD--ATRKNAVGTGAR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       V++G++D+F+ A +  ++
Sbjct: 306 SEKIRTYNY-PQNRVTDHRVGLTLNKLDQVMEGNIDEFIIALINEEQ 351


>gi|258542227|ref|YP_003187660.1| peptide chain release factor 1 [Acetobacter pasteurianus IFO
           3283-01]
 gi|256633305|dbj|BAH99280.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256636364|dbj|BAI02333.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256639417|dbj|BAI05379.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256642473|dbj|BAI08428.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256645528|dbj|BAI11476.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256648581|dbj|BAI14522.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256651634|dbj|BAI17568.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256654625|dbj|BAI20552.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 352

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 108/348 (31%), Positives = 179/348 (51%), Gaps = 13/348 (3%)

Query: 14  FD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           FD   D  V R   L  +        N        RE   ++  ++ I  +++       
Sbjct: 3   FDERLDQIVSRALELEAQLASG---LNGEAFTQASREYAEIEPVVARINALREVEDGIQQ 59

Query: 72  LLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +L  + +   + +     L+    +  +  +   L    AD+  A LEV   AGG E+
Sbjct: 60  AEQLLADPEMKELAEAELAELREQLPQLQKDVRLSLLPKDVADARSAILEVRPAAGGDEA 119

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L  MY R+A+   ++   ++  + E  G++     I G   +  LK E GVHR+
Sbjct: 120 GLFAAELFDMYRRYADLNGWRFTVMDYDESELGGLREGIAEINGKGVFARLKYESGVHRV 179

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ V P   + +++E++E+D R+D +RASGAGGQHVN T+SAV
Sbjct: 180 QRVPATESQGRIHTSTVTVAVLP-EAEEVDVEVNETDLRVDVFRASGAGGQHVNKTESAV 238

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+TH+P+G+VV  Q+E+SQHKN+A+A  +LRA+LY  E ++ +  AN     ++++G G 
Sbjct: 239 RLTHMPSGIVVSMQEEKSQHKNRAKAMKILRARLY--ERERAQAHANRAADRRSQVGTGD 296

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V+ G+LD+F+ A    ++
Sbjct: 297 RSERIRTYNF-PQGRVTDHRINLTLYKIDRVMLGELDEFVDALTQEEQ 343


>gi|161511164|ref|NP_539109.2| peptide chain release factor 1 [Brucella melitensis bv. 1 str. 16M]
 gi|225853308|ref|YP_002733541.1| peptide chain release factor 1 [Brucella melitensis ATCC 23457]
 gi|260562790|ref|ZP_05833276.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str. 16M]
 gi|20139330|sp|Q8YJ95|RF1_BRUME RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790867|sp|C0RFB5|RF1_BRUMB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|225641673|gb|ACO01587.1| peptide chain release factor 1 [Brucella melitensis ATCC 23457]
 gi|260152806|gb|EEW87898.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str. 16M]
          Length = 359

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 115/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 10  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  +        +      +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 66  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 126 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 186 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK    +   ++ ++++G G 
Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V++G+LD+ + A ++  +
Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGELDELVDALISDHQ 348


>gi|320449105|ref|YP_004203663.1| peptide chain release factor 1 [Thermus scotoductus SA-01]
 gi|320151737|gb|ADW23114.1| peptide chain release factor 1 [Thermus scotoductus SA-01]
          Length = 354

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 109/329 (33%), Positives = 172/329 (52%), Gaps = 8/329 (2%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
            DP + ++    + L R    +   I+ I+E +  L D   +  L  + +   + +   +
Sbjct: 20  ADPEVLKDQKRYQALSRRYAEMGEVIALIREYRKVLEDLEGVEGLLEDPELKEVARAEKE 79

Query: 91  NLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
            L   K ++E   +   L     D  DA +E+ AG GG E+  +A  LL MY R+AE+  
Sbjct: 80  ALLSRKADLEKALERHLLPKDPMDERDAIVEIRAGTGGEEAALFARDLLEMYLRFAEEMG 139

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+TE L+ H  +  G       ++GP AYG  K E GVHR+ R+   ++  R HTS +++
Sbjct: 140 FETEILDSHPTDLGGFSKVVFEVRGPGAYGTFKYESGVHRVQRVPATETQGRIHTSTATV 199

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  ++S   +++  + RID  RASG GGQ VNTTDSAVR+ H+PTG++V CQ  RSQ
Sbjct: 200 AVLPKAEESD-FQLNMDEIRIDVMRASGPGGQGVNTTDSAVRVVHLPTGIMVTCQDSRSQ 258

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDL 326
            KN+ +A  +LR++L  LE+++ EE   + ++   +IG G +   IR+Y   P   V D 
Sbjct: 259 IKNREKALMILRSRL--LEMKRAEEAEKLRKTRLAQIGTGERSEKIRTYNF-PQSRVTDH 315

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R          +L G L   ++A     +
Sbjct: 316 RIGFTTHDLEGILSGHLQPLLEALKRADQ 344


>gi|283956995|ref|ZP_06374467.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           1336]
 gi|283791496|gb|EFC30293.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           1336]
          Length = 355

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 114/345 (33%), Positives = 179/345 (51%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  ++R   LN+      +  ++ +   L +E+++L+  +   KE    L +      L
Sbjct: 6   LDPFLKRFEELNSLLSSSDILNDISKMTTLSKEQKNLEPIVLKAKEYLKTLDNIEENKAL 65

Query: 76  ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +      +E     +      E  +   L     D  + +LE+ AG GG E+  + 
Sbjct: 66  LNDPELGELAKEELKILEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGTGGDEASLFV 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L++ Y R+AE R +K E +   +G   G K   +L+KG  AY  LK E G HR+ R+ 
Sbjct: 126 GDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHRVQRVP 185

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P   D IEIEI+ +D ++D  R+SG GGQ VNTTDSAVRITH
Sbjct: 186 QTESQGRVHTSAITVAVMP-EVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV  Q  +SQHKNK  A  +L+A+LY  E+Q+ E +A   E+ K+++G G    +
Sbjct: 245 IPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQESERLAKESEARKSQVGSGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++ DG  D+ ++  +   +
Sbjct: 303 IRTYNF-PQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQ 346


>gi|29349618|ref|NP_813121.1| peptide chain release factor 1 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253570013|ref|ZP_04847422.1| peptide chain release factor 1 [Bacteroides sp. 1_1_6]
 gi|298383879|ref|ZP_06993440.1| peptide chain release factor 1 [Bacteroides sp. 1_1_14]
 gi|32171531|sp|Q8A011|RF1_BACTN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|29341528|gb|AAO79315.1| peptide chain release factor 1 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251840394|gb|EES68476.1| peptide chain release factor 1 [Bacteroides sp. 1_1_6]
 gi|298263483|gb|EFI06346.1| peptide chain release factor 1 [Bacteroides sp. 1_1_14]
          Length = 370

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 102/354 (28%), Positives = 168/354 (47%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   ++T   DP +  +      L +E + LD+ +   KE    L +      +
Sbjct: 11  LDGLVARFEEISTLITDPAVIADQKRYVKLTKEYKDLDDLMKARKEYIQLLGNIEEAKNI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + +   +  +   + E  L        DS +A LE+  GAGG E+ 
Sbjct: 71  LSNESDADMREMAKEEMDNSQERLPALEEEIKLMLVPADPQDSKNAILEIRGGAGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + +K E    ++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 IFAGDLFRMYAKFCETKGWKMEVSNANEGTAGGYKEIVCSVTGDNVYGILKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P  ++   + I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +I           ++++C + R Q KNK +A   LR  +Y+ E QK   I +I    K
Sbjct: 250 LRYIWKNPNTGVAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIASKRK 307

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T +  G +   IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360


>gi|332140695|ref|YP_004426433.1| Protein chain release factor B, RF-2 [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327550717|gb|AEA97435.1| Protein chain release factor B, RF-2 [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 248

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 158/246 (64%), Positives = 190/246 (77%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG  D ND Y+++ +G+GGTE+QDWANMLLRMY RW E   FKTE +E+ DG+ AGIK
Sbjct: 1   MFSGPNDENDCYIDIQSGSGGTEAQDWANMLLRMYLRWGEAHGFKTELIEVSDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SATL I+G  A+GWL+ E GVHRLVR SP+DS +RRHTSFSS +VYP +DD I+I+I+ S
Sbjct: 61  SATLRIQGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSSAFVYPEIDDDIDIDINPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQHVN TDSAVRITH PTG+VVQCQ +RSQHKNK QA   L+AKLYE
Sbjct: 121 DLRIDTYRASGAGGQHVNRTDSAVRITHEPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            ELQK+       E SK++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F
Sbjct: 181 FELQKQNAEKQAMEDSKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|158336840|ref|YP_001518014.1| peptide chain release factor 2 [Acaryochloris marina MBIC11017]
 gi|158307081|gb|ABW28698.1| peptide chain release factor 2 [Acaryochloris marina MBIC11017]
          Length = 304

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 139/297 (46%), Positives = 203/297 (68%)

Query: 58  FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
            +++ Q  L D   L+EL   E+D  +LQE + NL+++  +++  + + LLSG  D   A
Sbjct: 3   QLQDWQGTLDDAEALVELLQLEEDAGLLQEAAGNLRQLNQQLDQWELQQLLSGPYDKVGA 62

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            L ++ GAGGT++QDWA MLLRMYTRW+E++ +K    E+ +G+EAGIKSATL ++G  A
Sbjct: 63  VLTINTGAGGTDAQDWAEMLLRMYTRWSERQGYKVHLAELSEGDEAGIKSATLEVEGRYA 122

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           YG+LK E+G HRLVRISP+++N +R TSF+ I V P +D  +E++I ++D  I T R+ G
Sbjct: 123 YGYLKAEKGTHRLVRISPFNANGKRQTSFAGIEVMPQLDHEVELDIPDTDLEITTSRSGG 182

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQ+VN  ++AVRI H+PTG+ V+C QERSQ +NK +A  +L+AKL  +  +++ +   
Sbjct: 183 KGGQNVNKVETAVRIVHVPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQKAKEIA 242

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                  E  WG QIR+YV  PYQMVKDLRTN E T+   V+DG LD+F++A L  +
Sbjct: 243 DIRGDAVEAAWGNQIRNYVFHPYQMVKDLRTNQETTAIESVMDGALDNFIEAYLRQE 299


>gi|332188246|ref|ZP_08389974.1| peptide chain release factor 1 [Sphingomonas sp. S17]
 gi|332011745|gb|EGI53822.1| peptide chain release factor 1 [Sphingomonas sp. S17]
          Length = 357

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 111/345 (32%), Positives = 169/345 (48%), Gaps = 12/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L        L  +      + +E   L+   +   E++    +   L  +
Sbjct: 9   IAQIEARRDELQAMMATGDLPSD--RFVAVSKEYAELEPVANAAAEVRRLRQEADSLTFM 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + DD        +            +      L    AD   A LE+ AG GG E+  
Sbjct: 67  TQDGDDELRELAAEELHANRTALAAADRHLALALLPRDAADERAAMLEIRAGTGGDEAAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY R+AE++ ++ E +     +  G K     + G   +  LK E GVHR+ R
Sbjct: 127 FAGDLFRMYQRYAERQGWRVEVISASIPDTGGYKEVVASVAGAGVFAKLKFESGVHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P   + ++++I + D RID YR+SGAGGQHVNTTDSA+RI
Sbjct: 187 VPVTESGGRIHTSAATVAVLP-EAEEVDLQIDDKDLRIDIYRSSGAGGQHVNTTDSAIRI 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV  Q ERSQHKN+A+A  +LR +LYE E ++         + ++ +G G   
Sbjct: 246 THIPTGLVVIQQDERSQHKNRAKAMKVLRTRLYEAERERLAAER--AGTRRSMVGSGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +IR+Y   P   V D R N+      ++L+G+LD+ + A LA  
Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTLHRLPEILEGELDELIGALLAED 347


>gi|328952115|ref|YP_004369449.1| Peptide chain release factor 1 [Desulfobacca acetoxidans DSM 11109]
 gi|328452439|gb|AEB08268.1| Peptide chain release factor 1 [Desulfobacca acetoxidans DSM 11109]
          Length = 357

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 182/347 (52%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L  +  +P   +N    +   RE   L   I   ++ Q    +      L
Sbjct: 6   LHAIENRYLELEARLSEPETIKNQELYQQYAREHAELSPLIQIFRQHQQVERECDNNQAL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  I +   + +Q++K  +E+ +    F  L     D+ +  LE+ AG GG E+ 
Sbjct: 66  LKTETDEEIKELAREEIQQLKERLEHLENELRFLLLPKDPNDAKNILLEIRAGTGGEEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE+  +K E L  +     G+K    LI G   Y  LK E GVHR+ 
Sbjct: 126 LFAAELFRMYTRFAEQHGWKVEILSHNPTGIGGLKEIIALISGQQVYSLLKYESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P   + ++++IS  + RID +R+SG GGQ VNTTDSAVR
Sbjct: 186 RVPTTESQGRIHTSAVTVAILP-EAEDVDVQISPEELRIDVFRSSGPGGQSVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ E+SQHKNKA+A  +L+A+L ++  +++E+   + +  K+++G G  
Sbjct: 245 ITHLPTGMVVTCQDEKSQHKNKAKALKVLQARLLDI--KQQEQHQKMAQDRKSQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +        L+G LD+ + A ++  +
Sbjct: 303 SERIRTYNF-PQGRVTDHRLGLTLYRLEAFLEGGLDELLDALVSYYR 348


>gi|261323819|ref|ZP_05963016.1| peptide chain release factor 1 [Brucella neotomae 5K33]
 gi|261299799|gb|EEY03296.1| peptide chain release factor 1 [Brucella neotomae 5K33]
          Length = 372

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 115/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   +  +
Sbjct: 23  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDVAAM 78

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  +        +      +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 79  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 138

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 139 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 198

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 199 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 257

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK    +   ++ ++++G G 
Sbjct: 258 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 314

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V++GDLD+ + A ++  +
Sbjct: 315 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQ 361


>gi|325283910|ref|YP_004256451.1| Peptide chain release factor 2 [Deinococcus proteolyticus MRP]
 gi|324315719|gb|ADY26834.1| Peptide chain release factor 2 [Deinococcus proteolyticus MRP]
          Length = 365

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 133/335 (39%), Positives = 199/335 (59%), Gaps = 5/335 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L  +L  L    D     +RL+ L+    DP LW +   A+ + +E   +   +   + 
Sbjct: 3   ELQEKLASLREYLDIPGKERRLNELDHFLADPELWNDQNRARSITQEATSVRGVVEKYQG 62

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++  L     +LELA  ED+        +    I+  V+    E+L + +     A + V
Sbjct: 63  LKSDLDGLAEMLELAESEDERE---MLLEEQGGIEQRVDELYRETLFTMKHADTPAIIRV 119

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
             GAGGTE+QDWA ML RMY RWAE+R ++ + L+   G++AG +S   +I+G  AYG +
Sbjct: 120 KGGAGGTEAQDWAGMLARMYMRWAERRGYRVDILDEQPGDQAGYQSIEFIIRGEKAYGMM 179

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGG 240
             E GVHRLVR+SP+DSN+RR TSF+S+ V P   ++ I+I I +SD R D +R+ G+GG
Sbjct: 180 SAEHGVHRLVRVSPFDSNNRRQTSFASVDVVPEVPEEEIDIHIPDSDLRRDVFRSQGSGG 239

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVR+TH+PTG+ V CQ  RSQ KN   A  +L+ +LY++E++KREE A    
Sbjct: 240 QGVNTTDSAVRLTHLPTGIAVACQITRSQIKNHELALQILKQRLYDIEMRKREEEALAAR 299

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
             ++ + WG Q+RSYVL     +KD R+ + + +P
Sbjct: 300 GQQSSVEWGSQMRSYVLDKQ-YIKDHRSGLMQHNP 333


>gi|221195206|ref|ZP_03568262.1| peptide chain release factor 1 [Atopobium rimae ATCC 49626]
 gi|221185109|gb|EEE17500.1| peptide chain release factor 1 [Atopobium rimae ATCC 49626]
          Length = 355

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 111/349 (31%), Positives = 169/349 (48%), Gaps = 15/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + L  K  DP +  +  E   + +E       +   +   D L D     EL
Sbjct: 5   LEKILSAYADLEKKLADPAVVSDPKEYARIAKEHADQAELVELSRSYIDALDDIEAAKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
                D    +    ++   + ++   +     + +     D  D  +E+ AG GG E+ 
Sbjct: 65  LSGSSDAEEKEMLQADISENEAKLPELEDEIKIKLIPGDPNDEKDTIVEIRAGVGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MY R+AE R +K + L     E  G K+    + G   Y  +K E GVHR+ 
Sbjct: 125 IFAGDLFKMYERFAESRGWKVQVLSSSPSEAGGFKTIEFKVTGEKVYSVMKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R  TS +++ V P   D I+I+I++ D RIDTY ASG GGQ VNTT SAVR
Sbjct: 185 RVPKTESQGRIQTSTATVAVLP-EADDIDIQINQEDLRIDTYCASGPGGQGVNTTYSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---W 308
           ITH+PT  VVQ Q +RSQ +N+     MLRA+LYE EL++++     G    ++IG    
Sbjct: 244 ITHLPTNTVVQSQDQRSQIQNREVCMQMLRARLYEQELERQQAEQ--GADRLSQIGHGAR 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIE-KTSPSDVLDGD-LDDFMKATLAIKK 355
             +IR+Y  QP   V D R       +   VL GD L   +++  A ++
Sbjct: 302 SEKIRTYN-QPQDRVTDHRIGFNGTYN--GVLLGDTLPSVIESLAAAER 347


>gi|167470509|ref|ZP_02335213.1| peptide chain release factor 2 [Yersinia pestis FV-1]
          Length = 248

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 154/247 (62%), Positives = 188/247 (76%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE D  + YL++ AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  DG+ AG+K
Sbjct: 1   MFSGEYDRANCYLDLQAGSGGTEAQDWASMLLRMYLRWAESRGFKTEIIEESDGDVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +
Sbjct: 61  SATVKIIGEYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITHIPT +V QCQ +RSQHKNK QA   L+AKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E+QK+     + E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F
Sbjct: 181 FEMQKKNADKQVLEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGDLDKF 239

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 240 IEASLKA 246


>gi|298208407|ref|YP_003716586.1| putative peptide chain release factor [Croceibacter atlanticus
           HTCC2559]
 gi|83848330|gb|EAP86199.1| putative peptide chain release factor [Croceibacter atlanticus
           HTCC2559]
          Length = 316

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 139/308 (45%), Positives = 205/308 (66%), Gaps = 2/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+E       +   ++    + D  ++ E   E +      +        K  +E  +F+
Sbjct: 1   MKELNVKKTWVEDYEQAITFVEDLEVIFEFYKEGEAEETNVKERYAKA--KDLIEDLEFK 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LS E D   A L++ AGAGGTES DWA ML+RMY  WAEKR FK + L + +G+ AGI
Sbjct: 59  NMLSEEGDDLSAVLQITAGAGGTESCDWAEMLMRMYLMWAEKRGFKIKELNLQNGDVAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ +L I+G  A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+ DDSIEI+I+ 
Sbjct: 119 KTVSLEIEGNFAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDSIEIDINP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D   D  R+SGAGGQ+VN  ++   +TH P+G+V+   + RSQ +N+ +A  ML+++LY
Sbjct: 179 ADISWDFARSSGAGGQNVNKVETKAILTHHPSGIVIHNSETRSQLENREKAMQMLKSQLY 238

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+K++   +  ESSK +I WG QIR+YV+ PY++VKD+RT  E  +   V++GD+D 
Sbjct: 239 EIELRKQQAQRDEIESSKMKIEWGSQIRNYVMHPYKLVKDVRTAHETGNVDAVMNGDIDA 298

Query: 346 FMKATLAI 353
           F+KA L  
Sbjct: 299 FLKAFLMA 306


>gi|325956455|ref|YP_004291867.1| peptide chain release factor 1 [Lactobacillus acidophilus 30SC]
 gi|325333020|gb|ADZ06928.1| peptide chain release factor 1 [Lactobacillus acidophilus 30SC]
          Length = 362

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 101/347 (29%), Positives = 170/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V     L     DP +  +      + +E   L   +   K+ +    +     ++
Sbjct: 8   LEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKQDKKELEDNKKI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++   +    I+ E+   +       L     D  D  +E+H  AGG E+ 
Sbjct: 68  IANESDEDLIEMAKEENSEIEKEIPELEDQIKILMLPKDPNDDKDIIMEIHGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE++ +K   ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAERQGWKVSLIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + ++I+I   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMP-EYEQVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    + +  A      K  +G G  
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQ--AKYDAKRKNAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       V++G+LD+ + A +   +
Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQ 350


>gi|154483104|ref|ZP_02025552.1| hypothetical protein EUBVEN_00805 [Eubacterium ventriosum ATCC
           27560]
 gi|149735912|gb|EDM51798.1| hypothetical protein EUBVEN_00805 [Eubacterium ventriosum ATCC
           27560]
          Length = 286

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 156/279 (55%), Positives = 202/279 (72%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +  EE+D SI++E     +    E E  + E+LLSGE D N+A ++++AGAGGTES DWA
Sbjct: 1   MGEEENDASIVEEVEQETKEFIDEFEKTKIETLLSGEYDKNNAIVKINAGAGGTESCDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           +ML RMYTRWAE + +KTE L+  DG+EAGIKS T  + G NAYG+LK E+GVHRLVRIS
Sbjct: 61  SMLYRMYTRWAESKGYKTEVLDFLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRLVRIS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+++  +R TSF+S  V P +++ +++EI++ D RIDTYR+SGAGGQH+N T SAVRITH
Sbjct: 121 PFNAAGKRQTSFASCDVMPDIEEDLDVEINDDDIRIDTYRSSGAGGQHINKTSSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
            PTG+VVQCQ ERSQ +NK +A  ML+AKLY L+ Q+ EE  +       EIGWG QIRS
Sbjct: 181 NPTGIVVQCQNERSQLQNKDKAMKMLKAKLYVLKKQEEEEKRSGIRGEIKEIGWGSQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           YV+QPY MVKD RTN E T    V+DG +D F+ A L  
Sbjct: 241 YVMQPYTMVKDHRTNQEITDVGKVMDGYIDPFINAYLKW 279


>gi|296271838|ref|YP_003654469.1| peptide chain release factor 1 [Arcobacter nitrofigilis DSM 7299]
 gi|296096013|gb|ADG91963.1| peptide chain release factor 1 [Arcobacter nitrofigilis DSM 7299]
          Length = 355

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 111/337 (32%), Positives = 176/337 (52%), Gaps = 9/337 (2%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           + R   +N     P +  ++     L +E+  ++  ++  KE    L D      L  + 
Sbjct: 10  IDRYEEINGLLASPDISSDIKRMTTLSKEQSAIEPIVNKAKEYISVLNDIQDNKLLYDDP 69

Query: 80  DDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +   + +E   +L+  K    E  +   +     D+ + ++E+ AGAGG E+  +   L 
Sbjct: 70  ELGELAKEELKDLELRKPTIEEEIKVLMIPKDPNDNKNIFIELRAGAGGDEAGIFVGNLF 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           R Y R+AE + +K E +   + E  G K    L KG   Y  LK E G HR+ R+   +S
Sbjct: 130 RAYLRYAELKGWKVEIMNQSENEAGGYKEIVALFKGEQVYSRLKYESGTHRVQRVPATES 189

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS  ++ V P   D +E+EI   D +ID  RASG GGQ VNTTDSAVRITHIP+G
Sbjct: 190 QGRVHTSAITVAVMP-EVDDVEVEIDPGDLKIDVMRASGNGGQSVNTTDSAVRITHIPSG 248

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSY 315
           +VV  Q ++SQHKNK +A  +L+A+LY++++Q++ +  + G S K ++G G    +IR+Y
Sbjct: 249 LVVTNQDQKSQHKNKDKAMKVLKARLYDIQMQEKMD--SEGASRKEQVGTGDRSGRIRTY 306

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATL 351
              P   + D R N+       V+ DG  D+ +   +
Sbjct: 307 NY-PQGRISDHRINLTLYRLEAVMNDGVFDEIIDPLI 342


>gi|222823061|ref|YP_002574634.1| peptide chain release factor 1 [Campylobacter lari RM2100]
 gi|254790870|sp|B9KE98|RF1_CAMLR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|222538282|gb|ACM63383.1| peptide chain release factor 1 [Campylobacter lari RM2100]
          Length = 355

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 119/339 (35%), Positives = 186/339 (54%), Gaps = 9/339 (2%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           R   LNT   D ++  ++ +   L +E+++L+  +   KE    L D      L  + + 
Sbjct: 12  RFDELNTLLSDVNISNDISKMTALSKEQKNLEPIVEKAKEYLKTLDDIEENKLLLSDPEL 71

Query: 82  CSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
             + +E   NL+ +K    E  +   L     D  + +LE+ AG GG E+  +   L++ 
Sbjct: 72  GELAKEELKNLELLKPNLEEELKILLLPKDPNDDKNIFLEIRAGTGGDEASLFVGDLVKA 131

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y R+AE R +K E +   +G   G K   +LIKG  AY  LK E G HR+ R+   +S  
Sbjct: 132 YIRYAENRDYKYEIVSSSEGSVGGFKEIIILIKGNGAYSRLKYEGGTHRVQRVPETESQG 191

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS  ++ + P   D +EI+I+ +D +ID  R+SG GGQ VNTTDSAVRITHIPTG+V
Sbjct: 192 RVHTSAITVAIMP-EVDDVEIQINPNDLKIDVMRSSGHGGQSVNTTDSAVRITHIPTGIV 250

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317
           V  Q  +SQHKNK  A  +L+A+L+  E+Q++E +A   E+ K+++G G    +IR+Y  
Sbjct: 251 VVNQDGKSQHKNKESAMKVLKARLF--EMQEQERLAKESEARKSQVGSGDRSERIRTYNF 308

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLAIKK 355
            P   + D R N+       +L+G L D+ ++  +A  +
Sbjct: 309 -PQNRISDHRINLTLYRLDAILEGGLFDEIVEPLIAYYQ 346


>gi|86149291|ref|ZP_01067522.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|218563201|ref|YP_002344981.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|20139359|sp|Q9PM63|RF1_CAMJE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|85840073|gb|EAQ57331.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|112360908|emb|CAL35709.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|284926807|gb|ADC29159.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315927641|gb|EFV06972.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           DFVF1099]
 gi|315929077|gb|EFV08310.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           305]
          Length = 355

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 114/345 (33%), Positives = 178/345 (51%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R   LN+      +  ++ +   L +E+++L+  +   KE    L +      L
Sbjct: 6   LDPFFKRFEELNSLLSSSDILNDISKMTTLSKEQKNLEPIVLKAKEYLKTLDNIEENKAL 65

Query: 76  ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +      +E     +      E  +   L     D  + +LE+ AG GG E+  + 
Sbjct: 66  LNDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGTGGDEASLFV 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L++ Y R+AE R +K E +   +G   G K   +L+KG  AY  LK E G HR+ R+ 
Sbjct: 126 GDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHRVQRVP 185

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P   D IEIEI+ +D ++D  R+SG GGQ VNTTDSAVRITH
Sbjct: 186 QTESQGRVHTSAITVAVMP-EVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV  Q  +SQHKNK  A  +L+A+LY  E+Q+ E +A   E+ K+++G G    +
Sbjct: 245 IPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQESERLAKESEARKSQVGSGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++ DG  D+ ++  +   +
Sbjct: 303 IRTYNF-PQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQ 346


>gi|319901262|ref|YP_004160990.1| bacterial peptide chain release factor 1 (bRF-1) [Bacteroides
           helcogenes P 36-108]
 gi|319416293|gb|ADV43404.1| bacterial peptide chain release factor 1 (bRF-1) [Bacteroides
           helcogenes P 36-108]
          Length = 370

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 95/354 (26%), Positives = 165/354 (46%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   ++T   DP +  +      L +E + L + ++  KE    L       E+
Sbjct: 11  LEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMNARKEYMQVLNGIEEAKEI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +     + L   +      +       + +   DS +A LE+  G GG E+ 
Sbjct: 71  ITNEADPEMRDMAREELDLCQARQPELEEQIKLLLVPTDPQDSRNAILEIRGGTGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++ + + +K E    ++G   G K     + G   YG +K E GVHR+ 
Sbjct: 131 IFAGDLFRMYSKFCDIKGWKLEVSSANEGAAGGFKEIICSVTGDGVYGTMKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P  ++   + I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +            ++++C + R Q KNK +A + LR  +Y+ E QK   I +I    K
Sbjct: 250 LRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRK 307

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T +  G +   IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360


>gi|119470492|ref|ZP_01613195.1| peptide chain release factor 2 (RF-2) [Alteromonadales bacterium
           TW-7]
 gi|119446193|gb|EAW27470.1| peptide chain release factor 2 (RF-2) [Alteromonadales bacterium
           TW-7]
          Length = 283

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 163/281 (58%), Positives = 208/281 (74%), Gaps = 1/281 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +LELA+E +D     E +  L+ +  ++E  +F  + SG  D+NDAYL++ +G+GGTE+Q
Sbjct: 1   MLELAIEAEDKDTFDEANAELEGLNEQLESLEFRRMFSGTHDANDAYLDLQSGSGGTEAQ 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DW NMLLRMY RW E + FK E +E  DG+ AGIK AT+   G  AYGWL+ E GVHRLV
Sbjct: 61  DWCNMLLRMYLRWGEAKGFKVELVEATDGDVAGIKGATVRFVGEYAYGWLRTETGVHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS+ RRHTSF+S +VYP +DD+IEI+I+ SD RID YRASGAGGQHVNTT+SAVR
Sbjct: 121 RKSPFDSSGRRHTSFASAFVYPEIDDNIEIDINPSDLRIDVYRASGAGGQHVNTTESAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+PT  VVQCQ ERSQHKNKAQA   L+AKL+ELELQ++       E +K++IGWG Q
Sbjct: 181 ITHVPTNTVVQCQNERSQHKNKAQAMKQLKAKLFELELQQQNAEKQTQEDAKSDIGWGSQ 240

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IRSYVL     +KDLRT +E  +   VLDG+LD F++A+L 
Sbjct: 241 IRSYVLDD-SRIKDLRTGVENRNTQSVLDGNLDKFIEASLK 280


>gi|319795450|ref|YP_004157090.1| peptide chain release factor 1 [Variovorax paradoxus EPS]
 gi|315597913|gb|ADU38979.1| peptide chain release factor 1 [Variovorax paradoxus EPS]
          Length = 362

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 115/343 (33%), Positives = 177/343 (51%), Gaps = 7/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  VQRL  L+       +  ++ + + + RE   +       +  + R  D     E+
Sbjct: 9   LERYVQRLGELDFLLSREDIMSDMAQYRTISREHAEITQIAGRYERYRQREADIAGAKEM 68

Query: 76  ALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E        +    E  Q   L     D+ +A++E+ AG GG ES  +A
Sbjct: 69  LDDPDMAEMAREEIAGAEAELVQLEEELQRLLLPKDPDDARNAFMEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+ E+   + E +     E  G K   + I G   +G L+ E G HR+ R+ 
Sbjct: 129 GDLLRMYTRYCERAGLRCEIVSESASELGGYKEVVIRIVGDEVFGKLRFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V    D+++ ++I+ +D RIDTYRASGAGGQH+N TDSAVRITH
Sbjct: 189 ATETQGRIHTSACTVAVLAEPDETVAVQINPADLRIDTYRASGAGGQHINKTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+V +CQ +RSQH+NKA+A  +L A++   E  + E  A      K  IG G    +
Sbjct: 249 IPTGIVAECQDDRSQHRNKAKALQVLSARI--QEKDRSERAAKDAAMRKGLIGSGDRSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IR+Y   P   + D R N+       +++GDL D ++A  A +
Sbjct: 307 IRTYNF-PQGRLTDHRINLTLYKLLAIMEGDLGDVLEALRAAR 348


>gi|88860263|ref|ZP_01134901.1| peptide chain release factor 2 (RF-2) [Pseudoalteromonas tunicata
           D2]
 gi|88817461|gb|EAR27278.1| peptide chain release factor 2 (RF-2) [Pseudoalteromonas tunicata
           D2]
          Length = 260

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 155/258 (60%), Positives = 195/258 (75%), Gaps = 1/258 (0%)

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           +  ++E  +F  + SG+ D NDAYL++ +G+GGTE+QDW N+LLRMY RWA+ + FK E 
Sbjct: 1   MVAKLEKLEFRRMFSGDFDQNDAYLDLQSGSGGTEAQDWCNILLRMYLRWADAKGFKAEL 60

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E  DG+ AGIK AT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S +VYP 
Sbjct: 61  VEATDGDVAGIKGATVRIVGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFVYPE 120

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +DD+I+I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ ERSQHKNK 
Sbjct: 121 IDDNIKIDINPADLRIDVYRASGAGGQHVNTTESAVRITHLPTNTVVQCQNERSQHKNKD 180

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           QA   L+AKL+ELELQK+       E +K++IGWG QIRSYVL     +KDLRT IE  +
Sbjct: 181 QAMKQLKAKLFELELQKQNAEKQTQEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGIENRN 239

Query: 335 PSDVLDGDLDDFMKATLA 352
              VLDGDLD F++A+L 
Sbjct: 240 TQAVLDGDLDKFIEASLK 257


>gi|288905236|ref|YP_003430458.1| peptide chain release factor 1 [Streptococcus gallolyticus UCN34]
 gi|306831307|ref|ZP_07464467.1| peptide chain release factor RF1 [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325978212|ref|YP_004287928.1| peptide chain release factor 1 [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288731962|emb|CBI13527.1| peptide chain release factor 1 [Streptococcus gallolyticus UCN34]
 gi|304426543|gb|EFM29655.1| peptide chain release factor RF1 [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325178140|emb|CBZ48184.1| Peptide chain release factor 1 [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 359

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 99/348 (28%), Positives = 163/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E       ++  +E +  L +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMALSKEEASTRETVTVYREYKQILQNIEDAEEM 66

Query: 76  ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +      L+E +    +      +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKDAGGDPELEEMAKEELKDSKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL+MY ++AE + +K + +E       GIK   +++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLQMYQKYAESQGWKFDVMEASYNGVGGIKEVVVMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E EI   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +   Q  +   +     K+ IG G 
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQNEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVIDALILFDQ 350


>gi|237740205|ref|ZP_04570686.1| bacterial Peptide Chain Release Factor 2 [Fusobacterium sp. 2_1_31]
 gi|262068161|ref|ZP_06027773.1| peptide chain release factor 2 [Fusobacterium periodonticum ATCC
           33693]
 gi|294782698|ref|ZP_06748024.1| peptide chain release factor 2 [Fusobacterium sp. 1_1_41FAA]
 gi|229422222|gb|EEO37269.1| bacterial Peptide Chain Release Factor 2 [Fusobacterium sp. 2_1_31]
 gi|291378140|gb|EFE85658.1| peptide chain release factor 2 [Fusobacterium periodonticum ATCC
           33693]
 gi|294481339|gb|EFG29114.1| peptide chain release factor 2 [Fusobacterium sp. 1_1_41FAA]
          Length = 308

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 151/303 (49%), Positives = 208/303 (68%), Gaps = 1/303 (0%)

Query: 53  DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112
            N +S  +++   + D  +L++     +     +      + +K ++E  +   LL GE 
Sbjct: 5   KNIVSRYEKLATEVEDEEVLIDFVESGESSFENELIE-KHKTLKYDIEEFEVNLLLDGEY 63

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D N+A + +H+GAGGTE+ DWA+ML RMY RW   + +K   L+  +G+  G+KS T L+
Sbjct: 64  DMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKNYKVSELDFMEGDSVGVKSVTFLV 123

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G NAYG+LK E+GVHRLVRISP+D+N +RHTSF+S+ V P VDD++E+EI+ +D RIDT
Sbjct: 124 EGINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDDNVEVEINPADIRIDT 183

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN TDSAVRITH PTGVVV CQ+ERSQ  N+  A  ML++KL E+EL+K+
Sbjct: 184 YRASGAGGQHVNMTDSAVRITHFPTGVVVTCQKERSQLSNRETAMKMLKSKLLEIELKKK 243

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           EE     +  +T+IGWG QIRSYV QPY +VKD RTN E  +   V+DG +DDF+ + L 
Sbjct: 244 EEEMKKIQGEQTDIGWGNQIRSYVFQPYALVKDHRTNTEIGNVKAVMDGSIDDFINSYLR 303

Query: 353 IKK 355
             K
Sbjct: 304 WIK 306


>gi|146300064|ref|YP_001194655.1| peptide chain release factor 1 [Flavobacterium johnsoniae UW101]
 gi|189039972|sp|A5FHI8|RF1_FLAJO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|146154482|gb|ABQ05336.1| bacterial peptide chain release factor 1 (bRF-1) [Flavobacterium
           johnsoniae UW101]
          Length = 358

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 101/346 (29%), Positives = 173/346 (50%), Gaps = 12/346 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D      QR   ++     P +  +    K L +E + +   +   +E    L +   
Sbjct: 1   MLDRLQYVKQRFDEISDLIIQPDVISDQKRYKSLNQEYKGIKALVEKREEYIIVLANIDE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAGG 127
             E+  +  D  +++     L   K  +   + E           D+ +  +E+ AG GG
Sbjct: 61  ANEIIADGSDAEMVEMAKMQLDEAKDRLPELEEEIKFMLIPKDPEDAKNVMVEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYT++ E   ++T  +++++G   G K     + G + YG LK E GV
Sbjct: 121 DEASIFAGDLFRMYTKYCETMGWRTSVVDMNEGTSGGFKEVIFEVTGEDVYGTLKFEAGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P  ++     +  +D R+D + +SG GGQ VNTT 
Sbjct: 181 HRVQRVPQTETQGRVHTSAATVMVLPEAEEFDVQ-VDMNDVRVDFFCSSGPGGQSVNTTK 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V QCQ E+SQHKNK +A  +LR++LYE+EL K++E     +   +++ 
Sbjct: 240 SAVRLTHIPTGLVAQCQDEKSQHKNKDKALMVLRSRLYEMELAKKQEE--DAKKRSSQVS 297

Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            G +   IR+Y       V D R  +      ++++GD+   +   
Sbjct: 298 SGDRSAKIRTYNYA-QGRVTDHRVGLTLYDLGNIMNGDIQKIVSEL 342


>gi|19704676|ref|NP_604238.1| peptide chain release factor 2 [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|296328111|ref|ZP_06870644.1| peptide chain release factor RF2 [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|19714986|gb|AAL95537.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|296154782|gb|EFG95566.1| peptide chain release factor RF2 [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 308

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 147/303 (48%), Positives = 208/303 (68%), Gaps = 1/303 (0%)

Query: 53  DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112
            N +S  +++   + D  +L++     +     + +    + +K ++E  +   LL GE 
Sbjct: 5   KNIVSRYEKLATEIDDEEVLIDFVESGETSFESELSE-KHKNLKTDIEEFEINLLLDGEY 63

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D N+A + +H+GAGGTE+ DWA+ML RMY RW   + +K   L+  +G+  G+KS T L+
Sbjct: 64  DMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKGYKVSELDFMEGDSVGVKSVTFLV 123

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G NAYG+LK E+G+HRLVRISP+D+N +RHTSF+S+ V P VD+++E+EI+  D RIDT
Sbjct: 124 EGINAYGYLKSEKGIHRLVRISPFDANKKRHTSFASVEVVPEVDENVEVEINPVDIRIDT 183

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN TDSAVRITH P+G+VV CQ+ERSQ  N+  A  ML++KL ELEL+K+
Sbjct: 184 YRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQLSNRETAMKMLKSKLLELELKKK 243

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           EE     +  +++IGWG QIRSYV QPY +VKD RTN E  +   V+DGD+D F+ + L 
Sbjct: 244 EEEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDHRTNTEIGNVKAVMDGDIDGFINSYLR 303

Query: 353 IKK 355
             K
Sbjct: 304 WIK 306


>gi|260171648|ref|ZP_05758060.1| peptide chain release factor 1 [Bacteroides sp. D2]
 gi|299148543|ref|ZP_07041605.1| peptide chain release factor 1 [Bacteroides sp. 3_1_23]
 gi|315919960|ref|ZP_07916200.1| peptide chain release factor 1 [Bacteroides sp. D2]
 gi|298513304|gb|EFI37191.1| peptide chain release factor 1 [Bacteroides sp. 3_1_23]
 gi|313693835|gb|EFS30670.1| peptide chain release factor 1 [Bacteroides sp. D2]
          Length = 370

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 102/354 (28%), Positives = 168/354 (47%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   ++T   DP +  +      L +E + LD+ +   KE    L +      +
Sbjct: 11  LDGLVARFEEISTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYIQLLGNIEEAKNI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + +   +  +   + E  L        DS +A LE+  GAGG E+ 
Sbjct: 71  LANESDAEMREMAKEEMDNSQERLPVLEEEIKLMLVPADPQDSKNAILEIRGGAGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + +K E    ++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 IFAGDLFRMYAKFCETKGWKMEVSNANEGTAGGFKEVVCSVTGDNVYGILKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P  ++   + I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +I           ++++C + R Q KNK +A   LR  +Y+ E QK   I +I    K
Sbjct: 250 LRYIWKNPNTGIAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIASKRK 307

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T +  G +   IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360


>gi|34762942|ref|ZP_00143922.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|27887403|gb|EAA24493.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
          Length = 308

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 148/303 (48%), Positives = 208/303 (68%), Gaps = 1/303 (0%)

Query: 53  DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112
            N +S  +++   + D  +L++     +     +      + +K ++E  +   LL GE 
Sbjct: 5   KNIVSRYEKLATEIDDEEVLIDFVESGEASFENE-LQTKHKILKSDIEEFEINLLLDGEY 63

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D N+A + +H+GAGGTE+ DWA+ML RMY RW   + +K   L+  +G+  GIKS T L+
Sbjct: 64  DINNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKGYKVSELDFMEGDSVGIKSVTFLV 123

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G NAYG+LK E+GVHRLVRISP+D+N +RHTSF+S+ V P VD+++E+EI+ +D RIDT
Sbjct: 124 EGINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDENVEVEINPADIRIDT 183

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN TDSAVRITH P+G+VV CQ+ERSQ  N+  A  ML++KL ELE++K+
Sbjct: 184 YRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQLSNRETAMKMLKSKLLELEIKKK 243

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           EE     +  +++IGWG QIRSYV QPY +VKD RTN E  +   V+DG +DDF+ + L 
Sbjct: 244 EEEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDHRTNTEIGNVKAVMDGSIDDFINSYLR 303

Query: 353 IKK 355
             K
Sbjct: 304 WIK 306


>gi|256059849|ref|ZP_05450036.1| peptide chain release factor 1 [Brucella neotomae 5K33]
          Length = 359

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 115/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   +  +
Sbjct: 10  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDVAAM 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  +        +      +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 66  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 126 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 186 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK    +   ++ ++++G G 
Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V++GDLD+ + A ++  +
Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQ 348


>gi|329113396|ref|ZP_08242177.1| Peptide chain release factor 1 [Acetobacter pomorum DM001]
 gi|326697221|gb|EGE48881.1| Peptide chain release factor 1 [Acetobacter pomorum DM001]
          Length = 352

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 108/348 (31%), Positives = 177/348 (50%), Gaps = 13/348 (3%)

Query: 14  FD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           FD   D  V R   L  +        N        RE   ++  ++ I  ++        
Sbjct: 3   FDERLDQIVSRALELEAQLASG---LNGEAFTQASREYAEIEPVVARINALRGVEDGIRQ 59

Query: 72  LLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
              L  + +   + +     L+    +  +  +   L    AD+  A LEV   AGG E+
Sbjct: 60  AELLLADPEMKELAEAELTELREQLPQLQKDVRLSLLPKDVADARSAILEVRPAAGGDEA 119

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L  MY R+A+   ++   ++  + E  G++     I G   +  LK E GVHR+
Sbjct: 120 ALFAAELFDMYRRYADLNGWRFTVMDYDESELGGLREGIAEINGKGVFARLKYESGVHRV 179

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ V P   + +++E++E+D R+D +RASGAGGQHVN T+SAV
Sbjct: 180 QRVPATESQGRIHTSTVTVAVLP-EAEDVDVEVNETDLRVDVFRASGAGGQHVNKTESAV 238

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+TH+P+G+VV  Q+E+SQHKN+A+A  +LRA+LY  E ++ +  AN     ++++G G 
Sbjct: 239 RLTHMPSGIVVSMQEEKSQHKNRAKAMKILRARLY--ERERAQAHANRAADRRSQVGTGD 296

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V+ G+LD+F+ A    ++
Sbjct: 297 RSERIRTYNF-PQGRVTDHRINLTLYKIDRVMLGELDEFVDALTQEEQ 343


>gi|329888688|ref|ZP_08267286.1| peptide chain release factor 1 [Brevundimonas diminuta ATCC 11568]
 gi|328847244|gb|EGF96806.1| peptide chain release factor 1 [Brevundimonas diminuta ATCC 11568]
          Length = 345

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 110/341 (32%), Positives = 172/341 (50%), Gaps = 12/341 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            + R   +  +        +  E   L +E   L      ++ +     +   L  +A +
Sbjct: 1   MLDRFHQVEARMGAAT---DGAEIVRLSKEHAELKPVADAVQALARARAEADDLKAMAAD 57

Query: 79  EDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
            +  ++  +  D L                     ++  A LEV AG GG E+  +A  L
Sbjct: 58  PEMAALASDELDALTERLPTLEREVALLLAPRDADENASAVLEVRAGTGGDEAALFAGDL 117

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY+R+A+ R ++ E     +G+  G K     + G   +G LK E GVHR+ R+   +
Sbjct: 118 FRMYSRYAQSRGWRVEIDSAAEGDAGGFKEIIATVSGEGVFGRLKFESGVHRVQRVPTTE 177

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +  R HTS ++I V P   + +EIEI + D RIDTYR+SGAGGQHVN TDSAVRITH+PT
Sbjct: 178 AGGRIHTSAATIAVLP-EVEDVEIEILDKDIRIDTYRSSGAGGQHVNKTDSAVRITHLPT 236

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314
           G+V     E+SQH N+ +A   LR +LY+  +Q++ + A   ++ K+++G G    +IR+
Sbjct: 237 GIVATSS-EKSQHVNRDKAMKNLRVRLYD--MQRQAKDAARSDARKSQVGSGDRSERIRT 293

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           Y   P   V D R  +   S   +L+GDLD  + A +A  +
Sbjct: 294 YNF-PQGRVTDHRIGLTLHSLPQILEGDLDPMLNALIAEDQ 333


>gi|254476963|ref|ZP_05090349.1| peptide chain release factor 1 [Ruegeria sp. R11]
 gi|214031206|gb|EEB72041.1| peptide chain release factor 1 [Ruegeria sp. R11]
          Length = 351

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 175/344 (50%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +QR  +L     D    +++     L +E   L      I   +  L D     ++
Sbjct: 7   LEQILQRFQYLEAAMSDGASGEDIA---ALAKEYSDLRPVAEQIISYRRLLADLDEAEQM 63

Query: 76  ALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  ++ +E        +    +  Q   L    ADS  A LE+  G GG E+  +A
Sbjct: 64  LADPDMAALAEEELPGLRAALPEAEQALQLALLPRDAADSKPAMLEIRPGTGGDEAALFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE + +  E +E    E  G+K     +KG N +  LK E GVHR+ R+ 
Sbjct: 124 GDLLRMYQRYAEAQGWTFEIIEEQSTELGGLKEVVAHVKGNNVFARLKYESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + +++ I  +D RIDT RASGAGGQHVNTTDSAVRITH
Sbjct: 184 VTESGGRIHTSAATVAVLP-EAEEVDLRIDPADLRIDTMRASGAGGQHVNTTDSAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG++V    E+SQH+N+  A  +LR +LY+LE Q+ +          +++G G    +
Sbjct: 243 IPTGIIV-VSSEKSQHRNREIAMQVLRTRLYDLERQRIDSER--SADRASQVGSGDRSER 299

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++ GDLD+ + A  A  +
Sbjct: 300 IRTYNF-PQGRMSDHRINLTLYKLDQIMQGDLDEIIDALTADDQ 342


>gi|218960517|ref|YP_001740292.1| peptide chain release factor RF-1 [Candidatus Cloacamonas
           acidaminovorans]
 gi|167729174|emb|CAO80085.1| peptide chain release factor RF-1 [Candidatus Cloacamonas
           acidaminovorans]
          Length = 355

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 188/347 (54%), Gaps = 12/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                  L  +  +  DP +  +  + +  +R  + L    +  K  Q        +  L
Sbjct: 7   LQILENELKEMQEQISDPAVINDAQKYRDCLRRFKELREINAAWKHYQTLKKHIEEVNAL 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
              E+D  +L    D  + ++ ++E  + +       +   D+ +A +E+ AG GG E+ 
Sbjct: 67  EKTENDPEMLDLIKDEERSLQQQLEQTELKLKDLLIPADPNDAKNAIVEIRAGTGGEEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+ +AE + +K E + ++  E  G K     + G + Y +++ E GVHR+ 
Sbjct: 127 LFAADLFRMYSYYAEMKGWKLEVISMNQTELGGYKEIIFQLSGKDVYSYMRFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S+ R HTS  ++ V P   + I+I+I ESD RID YR++G GGQ VNTTDSAVR
Sbjct: 187 RIPVTESSGRIHTSAVTVAVLP-EAEDIDIDIQESDLRIDVYRSTGHGGQSVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+PTG+VV CQ E+SQ KNKA+A  +LR++L + E+ ++E+   I ++ K ++  G +
Sbjct: 246 ITHLPTGIVVTCQDEKSQIKNKAKALKVLRSRLLDEEISRQEQE--IAKARKAQVSTGDR 303

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT-LAIK 354
              IR+Y   P   V D R N+   +    L G++++F++A  LA +
Sbjct: 304 SAKIRTYNF-PQSRVTDHRINLTSYNLDSFLAGNIEEFIQALRLAWR 349


>gi|42518855|ref|NP_964785.1| peptide chain release factor 1 [Lactobacillus johnsonii NCC 533]
 gi|227889713|ref|ZP_04007518.1| peptide chain release factor 1 [Lactobacillus johnsonii ATCC 33200]
 gi|268319749|ref|YP_003293405.1| Peptide chain release factor 1 (RF-1) [Lactobacillus johnsonii
           FI9785]
 gi|61214647|sp|Q74K25|RF1_LACJO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|41583141|gb|AAS08751.1| peptide chain release factor 1 [Lactobacillus johnsonii NCC 533]
 gi|227849577|gb|EEJ59663.1| peptide chain release factor 1 [Lactobacillus johnsonii ATCC 33200]
 gi|262398124|emb|CAX67138.1| Peptide chain release factor 1 (RF-1) [Lactobacillus johnsonii
           FI9785]
 gi|329667598|gb|AEB93546.1| peptide chain release factor 1 [Lactobacillus johnsonii DPC 6026]
          Length = 362

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 95/342 (27%), Positives = 166/342 (48%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V     L     DP +  +      + +E   +   +   ++ +  + +     E+
Sbjct: 8   LEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADMREVVQKYRKYKSDIKEIDDNKEI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++   +    ++ EV   +       L     D  D  +E+   AGG E+ 
Sbjct: 68  ISTESDNDLVEMAKEENSELEKEVAELEDEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE + +K   ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAETQGWKVSLIDSEPTEVGGYKRVAVMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + ++I++   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RVPVTESQGRVHTSTATVAVMP-EYEQVDIDLDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    +  +        K  +G G  
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNRD--QYDAKRKESVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   V D R  +       +++G+LD+ + A 
Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEIINAL 345


>gi|315038002|ref|YP_004031570.1| peptide chain release factor 1 [Lactobacillus amylovorus GRL 1112]
 gi|312276135|gb|ADQ58775.1| peptide chain release factor 1 [Lactobacillus amylovorus GRL 1112]
 gi|327183282|gb|AEA31729.1| peptide chain release factor 1 [Lactobacillus amylovorus GRL 1118]
          Length = 362

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 100/347 (28%), Positives = 169/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V     L     DP +  +      + +E   L   +   K+ +    +     ++
Sbjct: 8   LEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKQDKKELEDNKKI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++   +    I+ E+   +       L     D  D  +E+   AGG E+ 
Sbjct: 68  IANESDEDLIEMAKEENSEIEKEIPELEDQIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE++ +K   ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAERQGWKVSLIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + ++I+I   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMP-EYEQVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    + +  A      K  +G G  
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQ--AKYDAKRKNAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       V++G+LD+ + A +   +
Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQ 350


>gi|317061399|ref|ZP_07925884.1| peptide chain release factor 2 [Fusobacterium sp. D12]
 gi|313687075|gb|EFS23910.1| peptide chain release factor 2 [Fusobacterium sp. D12]
          Length = 331

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 155/329 (47%), Positives = 218/329 (66%), Gaps = 1/329 (0%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             +T +   W +   +  L++        ++  + + + + +  +L+E     D+ S   
Sbjct: 2   EARTMEEGFWNDKKSSSALIKAMNEEKALLASFQSLVEEIEEEEVLIEFVEAGDE-SSQV 60

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E  +  +++  ++E      LL GE D N+A + +H+GAGGTE+ DWA+ML RMYTRW  
Sbjct: 61  ELEEKHKQLLKDMESFSTGLLLDGEYDGNNAIVTIHSGAGGTEACDWADMLYRMYTRWCH 120

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
            +K+K E ++   G+  GIKS T L+ G +AYG+LK E+G+HRLVRISP+D+N +RHTSF
Sbjct: 121 DKKYKIEEMDFMPGDSVGIKSITFLVSGYHAYGYLKCEKGIHRLVRISPFDANKKRHTSF 180

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S+ V P VD+S+E+E+  +D RIDTYRASGAGGQH+N TDSAVRITH PTG+VV CQ+E
Sbjct: 181 ASVEVVPEVDESVEVEVEAADIRIDTYRASGAGGQHINMTDSAVRITHFPTGIVVTCQKE 240

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQ  N+  A  ML++KL ELEL+K+EE     +  ++EIGWG QIRSYV QPY MVKD 
Sbjct: 241 RSQLNNRETAMKMLQSKLLELELKKKEEEMKKLQGEQSEIGWGSQIRSYVFQPYTMVKDH 300

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           RT +E  +   V+DGDLD+FM   L   K
Sbjct: 301 RTGVEVGNIKAVMDGDLDEFMNGYLRWNK 329


>gi|239907246|ref|YP_002953987.1| peptide chain release factor 2 [Desulfovibrio magneticus RS-1]
 gi|239797112|dbj|BAH76101.1| peptide chain release factor 2 [Desulfovibrio magneticus RS-1]
          Length = 285

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 137/247 (55%), Positives = 179/247 (72%)

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
            +   G  D+ DA LE+H GAGGTE+QDWA MLLRMY RWAE+++F  + L+   G+EAG
Sbjct: 30  LAAFFGPEDNADAILEIHPGAGGTEAQDWAEMLLRMYRRWAERKRFDVKMLDFLPGDEAG 89

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           +KS TL I GP AYG L  E+G+HRL+RISP+DS+ RRHTSF+S+ VYP     I+IE+ 
Sbjct: 90  VKSVTLQISGPYAYGLLAVEKGIHRLIRISPFDSSGRRHTSFASVDVYPDAGVDIDIEVK 149

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           E D R+D +RASG GGQHVN T SA+RITH+PT +VVQCQ E+SQH+N+  A  +L+A+L
Sbjct: 150 EDDLRVDVFRASGPGGQHVNKTSSAIRITHLPTNIVVQCQNEKSQHRNRETAMKVLKARL 209

Query: 285 YELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           Y+LEL+K E        SK  IG+G QIR+Y +QPY++VKD RT ++      VLDGDLD
Sbjct: 210 YDLELKKLEAEKQESYESKNAIGFGSQIRTYTMQPYRLVKDHRTGVDAGDVEAVLDGDLD 269

Query: 345 DFMKATL 351
            F++  L
Sbjct: 270 KFIRGFL 276


>gi|317475302|ref|ZP_07934568.1| peptide chain release factor 1 [Bacteroides eggerthii 1_2_48FAA]
 gi|316908556|gb|EFV30244.1| peptide chain release factor 1 [Bacteroides eggerthii 1_2_48FAA]
          Length = 370

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 100/354 (28%), Positives = 168/354 (47%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   ++T   DP +  +      L +E + L + ++  KE    L       E+
Sbjct: 11  LEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMNARKEYMQVLSGIEEAKEI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L   +      +       + +   DS +A LE+  GAGG E+ 
Sbjct: 71  IANETDAEMREMAREELDACQTRQPELEEQIKLLLVPADPQDSRNAILEIRGGAGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYT++ E + +K +    ++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 IFAGDLFRMYTKYCETKGWKLDISSANEGAAGGFKEIICSVTGDNVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P  ++   + I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +            ++++C + R Q KNK +A + LR  +Y+ E QK   I +I    K
Sbjct: 250 LRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRK 307

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T +  G +   IR+Y   P   + D R N    + S  +DGD+ D +   +  +
Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDGDIQDCIDHLIVAE 360


>gi|160887043|ref|ZP_02068046.1| hypothetical protein BACOVA_05057 [Bacteroides ovatus ATCC 8483]
 gi|237715527|ref|ZP_04546008.1| peptide chain release factor 1 [Bacteroides sp. D1]
 gi|262408537|ref|ZP_06085083.1| peptide chain release factor 1 [Bacteroides sp. 2_1_22]
 gi|293369398|ref|ZP_06615983.1| peptide chain release factor 1 [Bacteroides ovatus SD CMC 3f]
 gi|294646503|ref|ZP_06724140.1| peptide chain release factor 1 [Bacteroides ovatus SD CC 2a]
 gi|294807531|ref|ZP_06766328.1| peptide chain release factor 1 [Bacteroides xylanisolvens SD CC 1b]
 gi|298482182|ref|ZP_07000370.1| peptide chain release factor 1 [Bacteroides sp. D22]
 gi|156107454|gb|EDO09199.1| hypothetical protein BACOVA_05057 [Bacteroides ovatus ATCC 8483]
 gi|229444236|gb|EEO50027.1| peptide chain release factor 1 [Bacteroides sp. D1]
 gi|262353402|gb|EEZ02496.1| peptide chain release factor 1 [Bacteroides sp. 2_1_22]
 gi|292635565|gb|EFF54072.1| peptide chain release factor 1 [Bacteroides ovatus SD CMC 3f]
 gi|292638122|gb|EFF56503.1| peptide chain release factor 1 [Bacteroides ovatus SD CC 2a]
 gi|294445232|gb|EFG13902.1| peptide chain release factor 1 [Bacteroides xylanisolvens SD CC 1b]
 gi|295086791|emb|CBK68314.1| bacterial peptide chain release factor 1 (bRF-1) [Bacteroides
           xylanisolvens XB1A]
 gi|298271739|gb|EFI13312.1| peptide chain release factor 1 [Bacteroides sp. D22]
          Length = 370

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 102/354 (28%), Positives = 168/354 (47%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   ++T   DP +  +      L +E + LD+ +   KE    L +      +
Sbjct: 11  LDGLVARFEEISTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYIQLLGNIEEAKNI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + +   +  +   + E  L        DS +A LE+  GAGG E+ 
Sbjct: 71  LANESDAEMREMAKEEMDNSQERLPVLEEEIKLMLVPADPQDSKNAILEIRGGAGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + +K E    ++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 IFAGDLFRMYAKFCETKGWKMEVSNANEGTAGGFKEIVCSVTGDNVYGILKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P  ++   + I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +I           ++++C + R Q KNK +A   LR  +Y+ E QK   I +I    K
Sbjct: 250 LRYIWKNPNTGIAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIASKRK 307

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T +  G +   IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360


>gi|265999301|ref|ZP_05465736.2| peptide chain release factor 1 [Brucella melitensis bv. 2 str.
           63/9]
 gi|17982074|gb|AAL51373.1| bacterial peptide chain release factor 1 (rf-1) [Brucella
           melitensis bv. 1 str. 16M]
 gi|263093126|gb|EEZ17261.1| peptide chain release factor 1 [Brucella melitensis bv. 2 str.
           63/9]
 gi|326409872|gb|ADZ66937.1| peptide chain release factor 1 [Brucella melitensis M28]
 gi|326539585|gb|ADZ87800.1| peptide chain release factor 1 [Brucella melitensis M5-90]
          Length = 377

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 115/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 28  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 83

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  +        +      +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 84  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 143

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 144 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 203

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 204 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 262

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK    +   ++ ++++G G 
Sbjct: 263 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 319

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V++G+LD+ + A ++  +
Sbjct: 320 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGELDELVDALISDHQ 366


>gi|15618037|ref|NP_224321.1| peptide chain release factor 1 [Chlamydophila pneumoniae CWL029]
 gi|15835649|ref|NP_300173.1| peptide chain release factor 1 [Chlamydophila pneumoniae J138]
 gi|16752931|ref|NP_445202.1| peptide chain release factor 1 [Chlamydophila pneumoniae AR39]
 gi|33241449|ref|NP_876390.1| peptide chain release factor 1 [Chlamydophila pneumoniae TW-183]
 gi|6225941|sp|Q9Z968|RF1_CHLPN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|4376376|gb|AAD18266.1| Peptide Chain Releasing Factor [Chlamydophila pneumoniae CWL029]
 gi|7189573|gb|AAF38472.1| peptide chain release factor 1 [Chlamydophila pneumoniae AR39]
 gi|8978487|dbj|BAA98324.1| peptide chain releasing factor [Chlamydophila pneumoniae J138]
 gi|33235957|gb|AAP98047.1| translation releasing factor RF-1 [Chlamydophila pneumoniae TW-183]
 gi|269302994|gb|ACZ33094.1| peptide chain release factor 1 [Chlamydophila pneumoniae LPCoLN]
          Length = 357

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 113/337 (33%), Positives = 172/337 (51%), Gaps = 11/337 (3%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQ---HLDNAISFIKEIQDRLCDNLILLELAL 77
            RL+ +  K  +P ++ N  E   L +E      L NA   I  ++  L D+   L +  
Sbjct: 10  NRLAEVEIKISNPEIFSNSKEYSALSKEHSYLLELKNAYDKILNLEKVLADDKQALAIEK 69

Query: 78  EEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           + +   +L+E  +  +    ++    +   +     D  +  +E+ AG GG E+  +   
Sbjct: 70  DPEMVVMLEEGINENKVELEKLNKILESLLVPPDPDDDLNVIMELRAGTGGEEAALFVGD 129

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
            +RMY  +A  + +K E L   + +  G K   + I G      L+ E G HR+ R+   
Sbjct: 130 CVRMYHLYASSKGWKYEVLSASESDLKGYKEYVMGISGTGVKRLLQYEAGTHRVQRVPET 189

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIE-ISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           ++  R HTS  +I V P   +      I+E D +IDT+RASGAGGQHVN TDSAVRITH+
Sbjct: 190 ETQGRVHTSAITIAVLPEPSEEDTELLINEKDLKIDTFRASGAGGQHVNVTDSAVRITHL 249

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTGVVV CQ ERSQHKNK +A  +L+A++ + E+QKR   A+   S   ++G G    +I
Sbjct: 250 PTGVVVTCQDERSQHKNKDKAMRILKARIRDAEMQKRHNEASAMRS--AQVGSGDRSERI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           R+Y       V D R  +   +   V++GDLD    A
Sbjct: 308 RTYNFS-QNRVTDHRIGLTLYNLDKVMEGDLDPITTA 343


>gi|294101724|ref|YP_003553582.1| peptide chain release factor 1 [Aminobacterium colombiense DSM
           12261]
 gi|293616704|gb|ADE56858.1| peptide chain release factor 1 [Aminobacterium colombiense DSM
           12261]
          Length = 358

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 112/346 (32%), Positives = 174/346 (50%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+  +    L  +  DP +  N+ E + L ++   +++A+   +E +    D      L
Sbjct: 7   LDDLEKTFVDLEKQMSDPVVAANLKEIQQLAKKHAQIESAVLKYREYKKVKSDLEEAHSL 66

Query: 76  ALEEDDCSILQETSDNLQRI---KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
               D         +  ++    +   +      L     D     +E+  GAGG E+  
Sbjct: 67  LHSGDGDMQELAREEIKEKEPLLECIRDELHVLLLPVDPNDEKSVIMEIRGGAGGEEAAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+ E+  ++ E ++ ++    G+K     I G  AY  LK E GVHR+ R
Sbjct: 127 FSANLYRMYSRFCEREGWRIEIIQSNETGIGGLKEVIFKIDGRGAYSKLKFESGVHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS S++ V P   + ++++I   D +IDTYR+SGAGGQHVN TDSAVRI
Sbjct: 187 VPMTEAGGRIHTSTSTVAVLP-EVEDVDVDIRTEDLKIDTYRSSGAGGQHVNMTDSAVRI 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV CQ ERSQ KN+A+A   LRAKLY LE    ++     E  + +IG G   
Sbjct: 246 THLPTGIVVTCQDERSQIKNRAKAMMYLRAKLYGLEK--EKQAEEQAEERRGQIGSGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R  +        LDGDL + + A     +
Sbjct: 304 ERIRTYNY-PQNRITDHRIGLTLYKLDQYLDGDLYEMIDAMTMADQ 348


>gi|194335257|ref|YP_002017051.1| peptide chain release factor 1 [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|238693362|sp|B4SAR5|RF1_PELPB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|194307734|gb|ACF42434.1| peptide chain release factor 1 [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 357

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 104/352 (29%), Positives = 174/352 (49%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D   +  ++   L     DP+   + +  + L +E   L   +           +   
Sbjct: 1   MLDKLQSIKEKHLDLEQLLSDPNAAADQVRFRKLNKEYSDLREIVQAYDLYAATKTELDE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             +L   E D  + +     +  ++ ++   +       L   EADS +  +E+ AG GG
Sbjct: 61  SRQLLKSESDAEMKELVQAEISELQKKLPELEQQLKILLLPKEEADSRNVIIEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNAYGWLKGEQG 186
            E+  +A  L RMY R+AE + ++ E L  ++     G +  TL + G + YG +K E G
Sbjct: 121 EEAALFAADLTRMYQRYAEHQGWQCETLHFNESSVPGGFREITLSVNGHDVYGTMKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS  S+ V P   + +++EI   D R DTYR+ G GGQ+VN  
Sbjct: 181 VHRVQRVPDTETQGRIHTSAVSVAVLP-EAEEVDVEIRREDLRFDTYRSGGKGGQNVNKV 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++AVRITH+PTG+V  CQ++RSQ +NK +A  MLR KLY+++L ++++        ++ +
Sbjct: 240 ETAVRITHMPTGIVSACQEQRSQLQNKERAMQMLRTKLYDIQLAEQQQQRADL--RRSMV 297

Query: 307 GWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             G +   IR+Y   P   V D R      +   +L GDL D + A     +
Sbjct: 298 TTGDRSAKIRTYNY-PQSRVTDHRIAFTSHALPQILQGDLQDIINALKMHDQ 348


>gi|255693621|ref|ZP_05417296.1| peptide chain release factor 1 [Bacteroides finegoldii DSM 17565]
 gi|260620597|gb|EEX43468.1| peptide chain release factor 1 [Bacteroides finegoldii DSM 17565]
          Length = 370

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 103/354 (29%), Positives = 168/354 (47%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   ++T   DP +  +      L +E + LD+ +   KE    L +      +
Sbjct: 11  LDGLVARFEEISTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYIQLLGNIEEAKNI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAGGTESQ 131
              E D  I +   + +   +  +   + E  L        DS +A LE+  GAGG E+ 
Sbjct: 71  LATESDTDIREMAKEEMDLSQERLPVLEEEIKLMLVPADPQDSKNAILEIRGGAGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + +K E    ++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 IFAGDLFRMYAKYCEVKGWKLEVSNANEGTAGGYKEIVCSVTGDNVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P  ++   + I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +I           ++++C + R Q KNK +A   LR  +Y+ E QK   I +I    K
Sbjct: 250 LRYIWKNPNTGVSEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIASKRK 307

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T +  G +   IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360


>gi|330723258|gb|AEC45628.1| peptide chain release factor 1 [Mycoplasma hyorhinis MCLD]
          Length = 383

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 111/349 (31%), Positives = 176/349 (50%), Gaps = 6/349 (1%)

Query: 11  GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---L 66
             + +  ++  ++   L+ +  DP +  N+ E   + +E   +++ +   K    +   +
Sbjct: 25  KSMLNSLNSIKEKYEHLSNQLLDPEIVSNIKEYTKINKELASIEDIVLAFKNYLKQVSII 84

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D+  LL+    E      +E +   ++I+   +      L   E D  +  +E+   AG
Sbjct: 85  EDSKKLLQEKDVEIHNLAKEEITLATKKIEEIEKELVVLLLPKDENDDKNVIVEIRGAAG 144

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +   L +MY +WAE +K+  + L        G      L+ G   Y  LK E G
Sbjct: 145 GDEANIFVGDLYKMYLKWAESKKWSVKVLNSSLASAGGFTQIVFLVSGDKVYSKLKFESG 204

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ RI   ++  R HTS +++ + P VDD I+++I   D RIDTYR+SGAGGQ VNTT
Sbjct: 205 VHRVQRIPETETQGRVHTSTTTVTIMPEVDDDIQVDIKAQDLRIDTYRSSGAGGQSVNTT 264

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPTG+V   Q  RSQ  NK  A  +L++K+Y LE++K++ I           
Sbjct: 265 DSAVRITHIPTGLVSTSQDGRSQIANKELALKILKSKIYNLEVEKKQAIEGQFRKLAGSG 324

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R +   +   +V+ G+LD  + A LA  K
Sbjct: 325 ARSEKIRTYNY-PQDRVTDHRISFSTS-LKNVIVGNLDPIIDALLAEDK 371


>gi|282889838|ref|ZP_06298377.1| hypothetical protein pah_c004o248 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500412|gb|EFB42692.1| hypothetical protein pah_c004o248 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 354

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 108/340 (31%), Positives = 180/340 (52%), Gaps = 10/340 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLE 74
             + +L  L     +P ++Q+    + L +E  +L    S  +++     ++ DN  +L 
Sbjct: 7   KLLSKLPDLEEALGNPEVFQDQKRYRALTQEHAYLSELKSVWEKMVKSNKQIEDNQEMLA 66

Query: 75  LALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
                +   +  ++T +    ++      +   +     D  +  +E+ AG GG E+  +
Sbjct: 67  DEANAELKEVLEEDTRNLRSLVEKLQVDLENLLVPPDPNDHRNTIVELRAGTGGDEAALF 126

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
               +RMY  +A+ + ++ E L     E  G K   +++ G N Y +L  E G HR+ R+
Sbjct: 127 VGDCVRMYKLYADSKGWRYELLSCTPSEMGGFKEYVMVLSGQNVYRFLHYEGGTHRVQRV 186

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS  ++ +    D+  E+ I E D R+DTYR+SGAGGQHVNTTDSAVR+T
Sbjct: 187 PETEAQGRVHTSAMTVAILLEPDEDTEVVIDEKDLRVDTYRSSGAGGQHVNTTDSAVRLT 246

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H PTG+VV CQ+ERSQHKNK +A  +L+AK+ E E +K++E   I  +   ++G G    
Sbjct: 247 HNPTGIVVYCQEERSQHKNKEKAMRLLKAKIVEAEQRKKQEE--IASNRSQQVGSGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +IR+Y   P   + D R N+ + +   V++GDLD+   A 
Sbjct: 305 RIRTYNF-PQNRITDHRINLTRYNLDRVMEGDLDEITLAL 343


>gi|270264900|ref|ZP_06193164.1| peptide chain release factor 2 [Serratia odorifera 4Rx13]
 gi|270041198|gb|EFA14298.1| peptide chain release factor 2 [Serratia odorifera 4Rx13]
          Length = 248

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 155/247 (62%), Positives = 192/247 (77%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE DS D YL++ AG+GGTE+QDWA+MLLRMY RWAE + FKTE +E  DG+ AG+K
Sbjct: 1   MFSGEYDSADCYLDIQAGSGGTEAQDWASMLLRMYLRWAESKGFKTEVIEESDGDVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ I G  A+GWL+ E GVHRLVR SP+DS  RRHTSFSS+++YP VDD I+I+I+ +
Sbjct: 61  SATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVDDDIDIDINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITH+PT +VVQCQ +RSQHKNK QA+  LRAKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E+QK+       E +K++IGWG QIRSYVL     +KDLRTN+E  +   VLDGDLD F
Sbjct: 181 FEMQKKNADKQQMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTNVETRNTQAVLDGDLDKF 239

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 240 IEASLKA 246


>gi|239832947|ref|ZP_04681276.1| peptide chain release factor 1 [Ochrobactrum intermedium LMG 3301]
 gi|239825214|gb|EEQ96782.1| peptide chain release factor 1 [Ochrobactrum intermedium LMG 3301]
          Length = 357

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 118/348 (33%), Positives = 185/348 (53%), Gaps = 18/348 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L   +  I+E+ D   + + L  +
Sbjct: 10  DQLLKRFSMIESQMANNP----DSETYVKLASEYSELQEVVGKIRELTDARREAVDLAAM 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  +        +      +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 66  RDDAATDAEMRALALEELPEVEKRIGTLEQEVQILLLPKDAADEKNAILEIRAGTGGLEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 126 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 186 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK        ES ++++G G 
Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AETERSESRRSQVGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V++GDLD+ + A ++  +
Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQ 348


>gi|156744082|ref|YP_001434211.1| peptide chain release factor 2 [Roseiflexus castenholzii DSM 13941]
 gi|156235410|gb|ABU60193.1| peptide chain release factor 2 [Roseiflexus castenholzii DSM 13941]
          Length = 317

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 142/310 (45%), Positives = 198/310 (63%), Gaps = 3/310 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+    L   +  I+ +  +L     L++LA  E+D S+  + +  L+R + E+E  + E
Sbjct: 1   MQRLTRLKEEVERIEALDRQLTALADLIDLAAAEEDDSLQADIAAELERTRREIEALEIE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSG  D  DA+L + AG GGT++QDWA MLLRMY RW E+R F+   ++  DGEEAGI
Sbjct: 61  VLLSGPYDDRDAFLSIKAGMGGTDAQDWAEMLLRMYMRWGERRGFQVALIDQSDGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ ++GP AYG  K E GVHRL+R+SP+++ + R TSF+ + V P VDD+ E+ I  
Sbjct: 121 KSATIELRGPYAYGSAKAEAGVHRLIRLSPFNAGNTRQTSFAMVEVLPEVDDAPEVVIRP 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIP---TGVVVQCQQERSQHKNKAQAWNMLRA 282
            D R+D +RASG GGQ VNTTDSAVRIT+ P     +VV CQ ERSQ +N+  A  +LR 
Sbjct: 181 EDIRVDVFRASGHGGQGVNTTDSAVRITYKPGTPEQIVVTCQNERSQLQNRETAMRVLRG 240

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           +L E ELQ++ E          +  +G Q+R+Y L PY +VKD RT+ E +    VLDGD
Sbjct: 241 RLLERELQRKREERARLRGEYRQADFGNQMRTYYLHPYTLVKDHRTDYETSDVQAVLDGD 300

Query: 343 LDDFMKATLA 352
           +D F++A L 
Sbjct: 301 IDPFIEAYLR 310


>gi|320546676|ref|ZP_08040988.1| peptide chain release factor RF1 [Streptococcus equinus ATCC 9812]
 gi|320448731|gb|EFW89462.1| peptide chain release factor RF1 [Streptococcus equinus ATCC 9812]
          Length = 359

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 163/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E       ++  +E +  L +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMALSKEEASTRETVAVYREYKKVLQNIEDAEEM 66

Query: 76  ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +      L+E +    +      +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKDAGGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL+MY ++AE + +K + +E       GIK   +++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLQMYQKYAESQGWKFDVMEASYNGVGGIKEVVVMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E EI   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +   Q  +   +     K+ +G G 
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKVIRARVADHFAQIAQNEQD--AERKSTVGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKLDEIIDALVLFDQ 350


>gi|300172696|ref|YP_003771861.1| peptide chain release factor 1 [Leuconostoc gasicomitatum LMG
           18811]
 gi|299887074|emb|CBL91042.1| Peptide chain release factor 1 [Leuconostoc gasicomitatum LMG
           18811]
          Length = 357

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 96/344 (27%), Positives = 173/344 (50%), Gaps = 8/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               V R   LN +  DP +  +  +   L++E   +   +      Q  +       ++
Sbjct: 8   LQTVVDRYDELNEQLADPDVAGDGQQYMALLKEAGEMRETVEVYTHYQQVMQGISDAEDM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E  + L+  K+ +E + +   L     D  +  +E+   AGG ES  +A
Sbjct: 68  LDDAEMAPLAKEDLNTLKPEKIVLEDQLKILMLPKDPNDDKNIIMEIRGAAGGDESSLFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LL MY R+AEK+++    ++    E  G K   ++I G N Y  LK E G HR+ R+ 
Sbjct: 128 ADLLDMYRRYAEKQRWVVSIIDETITEVGGYKEVAIMITGDNVYSKLKFESGAHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P  ++ I+ E++ESD   + +R+ GAGGQ+VN   +AVR+ H
Sbjct: 188 STETQGRVHTSTATVGVMPEFEE-IDFELAESDLEEEFFRSGGAGGQNVNKVSTAVRLVH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            PTG++V+ Q+ER+Q KN+ +A  +L +++Y+   Q+ E      E  K+ +G G    +
Sbjct: 247 KPTGIMVKMQEERTQIKNRDKARKLLASRVYDFYAQQNEAE--YAEKRKSAVGTGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R  +       +++G+L + + A +   +
Sbjct: 305 IRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELGEIVDALVIADQ 347


>gi|157827015|ref|YP_001496079.1| peptide chain release factor 2 [Rickettsia bellii OSU 85-389]
 gi|157802319|gb|ABV79042.1| peptide chain release factor 2 [Rickettsia bellii OSU 85-389]
          Length = 285

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 171/279 (61%), Positives = 215/279 (77%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A  E+D  I+Q+   +LQ +       + E L SGEADSN+ +LE++AGAGGTES DWA
Sbjct: 1   MAEAENDLEIMQQVEKDLQSLSTIAAKFETECLFSGEADSNNCFLEINAGAGGTESHDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           ++++RMY R+AE+  FKTE + + +GEEAGIKS T+ I G  AYGWLK E GVHRLVRIS
Sbjct: 61  SIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGRRAYGWLKTEAGVHRLVRIS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+++  +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQHVNTTDSAVRITH
Sbjct: 121 PFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           IPTG V QCQ +RSQHKNKAQA  ML+AKLYELE+QKR +  N   ++KT+  WG QIRS
Sbjct: 181 IPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWGHQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           YVLQPYQMVKDLRT+ E +    VLDGDL++F+ A+LA+
Sbjct: 241 YVLQPYQMVKDLRTDYETSDTKGVLDGDLEEFVSASLAM 279


>gi|62185243|ref|YP_220028.1| peptide chain release factor 1 [Chlamydophila abortus S26/3]
 gi|81312600|sp|Q5L5L4|RF1_CHLAB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|62148310|emb|CAH64077.1| peptide chain release factor 1 [Chlamydophila abortus S26/3]
          Length = 361

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 109/340 (32%), Positives = 171/340 (50%), Gaps = 11/340 (3%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL----CDNLILLELA 76
           +RL  +  +  +P ++ N  E  +L +E   L    +    +  +      D   L +  
Sbjct: 10  KRLEEVEVEISNPEIFNNPKEYSLLSKEHARLSELKNTYDRVMAQEKVLSDDKQALAQEK 69

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
             E    + +        ++   +  +   +     D  +  +E+ AG GG E+  +   
Sbjct: 70  DPEMIAMLEEGIQSGKAEVEKLYKILENLLVPPDPDDDLNVIMELRAGTGGDEAALFVGD 129

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
            +RMY  +A  + +K E L   + +  G K   + I G      L+ E G HR+ R+   
Sbjct: 130 CVRMYHLYASAKGWKYEVLSASESDIGGYKEYVMGISGTGVKRLLQYEAGTHRVQRVPET 189

Query: 197 DSNSRRHTSFSSIWVYPVV-DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           ++  R HTS  ++ V P   +D  E+ I E D +IDT+RASGAGGQHVN TDSAVRITH+
Sbjct: 190 ETQGRVHTSAITVAVLPEPAEDDEEVFIDEKDLKIDTFRASGAGGQHVNVTDSAVRITHL 249

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTGVVV CQ ERSQHKNKA+A  +L+A++ + E+Q+R + A+   S   ++G G    +I
Sbjct: 250 PTGVVVTCQDERSQHKNKAKAMRILKARIRDAEIQRRHKEASAMRS--AQVGSGDRSERI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           R+Y       V D R  +   S   V++GDLD    A ++
Sbjct: 308 RTYNFS-QNRVTDHRIGLTLYSLDKVMEGDLDTITSALVS 346


>gi|257453431|ref|ZP_05618726.1| peptide chain release factor 1 [Enhydrobacter aerosaccus SK60]
 gi|257449183|gb|EEV24131.1| peptide chain release factor 1 [Enhydrobacter aerosaccus SK60]
          Length = 364

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 107/336 (31%), Positives = 166/336 (49%), Gaps = 11/336 (3%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
           F  D    R   +     +P    +  + + L  E   L   +    + +    D     
Sbjct: 7   FRLDQMSDRFEEVTAMLSEPETMNDNKKFRELSVEHSDLSALVDVWGKYRQAEEDLATAE 66

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGT 128
           E+  +      ++E +    +   +   +         L     D   A+LE+ AG GG 
Sbjct: 67  EMLSDATGDGDMKEMAQEEIQAAKDTINELEDVLNVMMLPKDPNDKVPAFLEIRAGTGGD 126

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  ++  L RMY R+A  + ++ E L  ++GE  G K     + G   YG LK E G H
Sbjct: 127 EAAIFSGDLFRMYERYAATQGWQVEVLSENEGEHGGYKEIISRVSGTGVYGRLKFESGAH 186

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS  ++ V P V+    ++I+ +D RIDTYRASGAGGQH+N TDS
Sbjct: 187 RVQRVPETESQGRVHTSACTVAVMPEVEIDDTVDINPADLRIDTYRASGAGGQHINKTDS 246

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITHIPTG VV+CQQERSQH N+ +A  ML +K+ + ++QK+ + ++     +  +G 
Sbjct: 247 AVRITHIPTGTVVECQQERSQHANRDKAMKMLVSKIQQEKVQKQIDASSDM--RRNLVGS 304

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           G    +IR+Y   P   + D R N+       ++ G
Sbjct: 305 GDRSERIRTYNF-PQGRMTDHRINLTLYKLDAIMQG 339


>gi|58337080|ref|YP_193665.1| peptide chain release factor 1 [Lactobacillus acidophilus NCFM]
 gi|227903648|ref|ZP_04021453.1| peptide chain release factor 1 [Lactobacillus acidophilus ATCC
           4796]
 gi|75432974|sp|Q5FKZ0|RF1_LACAC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|58254397|gb|AAV42634.1| peptide chain release factor I [Lactobacillus acidophilus NCFM]
 gi|227868535|gb|EEJ75956.1| peptide chain release factor 1 [Lactobacillus acidophilus ATCC
           4796]
          Length = 361

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 99/347 (28%), Positives = 170/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ V     L     DP +  +      + +E   L   +   K+ ++   +     E+
Sbjct: 8   LESLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKENKKEIEDNKEI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++   +    ++ E+   +       L     D  D  +E+   AGG E+ 
Sbjct: 68  ISNETDSDLIEMAKEENAELEKEIPELEDQIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE++ +    ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAERQNWNVSMIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + ++I+I   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMP-EYEQVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    + +  A      K  +G G  
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQ--AQYDAKRKNAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       V++G+LD+ + A +   +
Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTLNKLDRVMNGELDEIIDALILYNQ 350


>gi|119961991|ref|YP_948327.1| peptide chain release factor 1 [Arthrobacter aurescens TC1]
 gi|119948850|gb|ABM07761.1| peptide chain release factor 1 [Arthrobacter aurescens TC1]
          Length = 359

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 109/353 (30%), Positives = 178/353 (50%), Gaps = 15/353 (4%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            +F+     +   + +  +  DP ++ +   A+ L R    L   +    + +    D  
Sbjct: 2   KMFESVQGLLDEHAAIQAQLSDPAVYADQSAARKLGRRSAQLQGIVEAYNKWRGLNDDLE 61

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
              E+A E+ + +      +         E  +   +     D+ +  LEV  G GG E+
Sbjct: 62  AAKEMADEDPEFAAEVVQLEEQIP--AAQERLRRLLIPRDPDDARNVILEVKGGEGGDEA 119

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN------AYGWLKGE 184
             +A  LLRMY R+AE R +KTE +   + +  G K   + IKG +       +  LK E
Sbjct: 120 ALFAGDLLRMYMRYAESRGWKTEMISATESDLGGYKDVAVAIKGNSNDPAQGVFARLKFE 179

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS + + V P VD+  E+EI+++D +ID YR+SG GGQ VN
Sbjct: 180 GGVHRVQRVPVTESQGRIHTSAAGVLVLPEVDEPEELEINQNDLKIDVYRSSGPGGQSVN 239

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRITH+PTG+VV  Q E+SQ +N+     +LRA+L   + ++ +  A   E  K+
Sbjct: 240 TTDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARLLAHQQEQID--AANSEQRKS 297

Query: 305 EI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +I       +IR+Y   P   + D RT  +  +   V++GDL+  +++ +   
Sbjct: 298 QIRTMDRSERIRTYNF-PENRIADHRTGYKAYNLDAVMNGDLEPVIQSAIEAD 349


>gi|330837036|ref|YP_004411677.1| bacterial peptide chain release factor 1 (bRF-1) [Spirochaeta
           coccoides DSM 17374]
 gi|329748939|gb|AEC02295.1| bacterial peptide chain release factor 1 (bRF-1) [Spirochaeta
           coccoides DSM 17374]
          Length = 354

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 106/342 (30%), Positives = 180/342 (52%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+  + L+ L+ K   P   +++   K LM+ER HL   +  ++ ++         L L
Sbjct: 5   LDSFEKELAGLDMKISSPDTMKDMNLFKSLMQERSHLVPIVEELQHLKHVSSQLEESLAL 64

Query: 76  ALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++ T + ++     ++      +   +        +  +E+ AG GG E+ 
Sbjct: 65  LKSETDPDMIEMTKEEIEGLKAEVEASTSRTKVLLIPPDPLSGKNIIMEIRAGTGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYT +AE + +K E L +++    GIK     I G + YG L+ E GVHR+ 
Sbjct: 125 LFAADLYRMYTHYAEAKNWKIEILTLNETGLGGIKEVVCSISGKDVYGSLRWESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P  +++    I   D ++D  R+ G GGQ VNTTDSAVR
Sbjct: 185 RVPETEAGGRIHTSACTVAVLPEAEETDIE-IRPEDLKVDVMRSGGPGGQSVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV CQ E+SQ KNKA+A  +LR++LY++E +K+ +        + ++G G  
Sbjct: 244 MTHLPTGIVVICQDEKSQIKNKAKALRVLRSRLYDMEEEKKAKERADA--RRDQVGSGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   + D R N+       +++G L++  +A 
Sbjct: 302 SERIRTYNF-PQNRLTDHRINLTLYKLDLIMNGQLEEVTEAL 342


>gi|319408172|emb|CBI81825.1| peptide chain release factor 1 [Bartonella schoenbuchensis R1]
          Length = 359

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 119/349 (34%), Positives = 178/349 (51%), Gaps = 18/349 (5%)

Query: 16  WDNAVQRLSFLNTKTE-DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
                +R   + ++    P    N      L  E   L   ++ I+ +     +   L  
Sbjct: 9   IKQIEKRFEIIESQMAGSP----NAETYIKLASEYAELQLIVTPIRTLNALYKEIEELKN 64

Query: 75  LALEEDDCSILQETSDN-----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           +  ++     ++  +        Q+I+      Q   L    AD   A +E+ AG GG+E
Sbjct: 65  IISDKQTDVEMRNLAQEELSLLCQKIEQLERELQILLLPKDIADEKSAIIEIRAGTGGSE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY R+A    +K E + + DG+  G K     + G   +  LK E GVHR
Sbjct: 125 AALFAGDLFRMYERYANTHNWKVEIISLSDGDVGGYKEIVATVSGKGVFSKLKFESGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + RI   ++  R HTS +++ V P   + I+I I   D RIDT RASGAGGQHVNTTDSA
Sbjct: 185 VQRIPETEAGGRIHTSAATVAVLP-EAEEIDIAIHPEDIRIDTMRASGAGGQHVNTTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG++V  Q E+SQH+N+ +A  +LRA+L+++E QK        ES KT+IG G
Sbjct: 244 VRITHIPTGIMV-VQAEKSQHQNRTRALQILRARLFDIERQK--AENERSESRKTQIGSG 300

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V++GDLD+ + A ++  +
Sbjct: 301 DRSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELIHALISNHQ 348


>gi|307565625|ref|ZP_07628103.1| peptide chain release factor 1 [Prevotella amnii CRIS 21A-A]
 gi|307345657|gb|EFN91016.1| peptide chain release factor 1 [Prevotella amnii CRIS 21A-A]
          Length = 370

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 93/354 (26%), Positives = 159/354 (44%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   ++T   DP++  +      L RE + L + +   K     L       ++
Sbjct: 11  LDGLEARFEEVSTLITDPNVINDQARYVKLTREYKDLGDIMEARKRYIACLTTIKEAKDI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E+D  + +   + L   ++     +       +     D+ +  +EV AG GG E+ 
Sbjct: 71  LANENDPDMKEMAREELSDNEILQPKLEEEIKLLLVPKDSEDAKNVQMEVRAGTGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  +  MY R+ +K+ +     +I++G   G K     I G   YG LK E GVHR+ 
Sbjct: 131 LFAGDIFNMYKRFCDKKGWTLSVTDINEGAVGGFKEIDFAISGEGVYGILKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   D+  R  TS +++ V P  D      I+E D + DT+R+SGAGGQ+VN  +S VR
Sbjct: 191 RVPSTDTQGRMQTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKVESGVR 249

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +            ++++C + R Q KNK +A + LR  +Y+ E QK   I +I    K
Sbjct: 250 LRYPWKNPNTGEIEEILIECTETRDQPKNKERALSRLRTFIYDREHQKY--INDIANRRK 307

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + +  G +   IR+Y   P   V D R           ++G++ + + A    +
Sbjct: 308 SLVSTGDRSAKIRTYNY-PQGRVTDHRIGFTSHDLPGFMNGNIQEMIDALTVAE 360


>gi|153807530|ref|ZP_01960198.1| hypothetical protein BACCAC_01810 [Bacteroides caccae ATCC 43185]
 gi|149129892|gb|EDM21104.1| hypothetical protein BACCAC_01810 [Bacteroides caccae ATCC 43185]
          Length = 370

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 101/354 (28%), Positives = 167/354 (47%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   ++T   DP +  +      L +E + LD+ +   KE    L +      +
Sbjct: 11  LDGLVARFEEISTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYMQLLGNIEEARNI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + +   +  +   + E  L        DS +A LE+  G GG E+ 
Sbjct: 71  LANESDADMREMAKEEMDSSQERLPVLEEEIKLMLVPADPQDSKNAILEIRGGTGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + +K E    ++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 IFAGDLFRMYAKYCETKGWKMEVSSANEGAAGGFKEIICSVTGDNVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P  ++   + I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +I           ++++C + R Q KNK +A   LR  +Y+ E QK   I +I    K
Sbjct: 250 LRYIWKNPNTGVAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIASKRK 307

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T +  G +   IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLTAFMDGDIQDCIDHLIVAE 360


>gi|83816205|ref|YP_445488.1| peptide chain release factor 1 [Salinibacter ruber DSM 13855]
 gi|294507374|ref|YP_003571432.1| peptide chain release factor 1 [Salinibacter ruber M8]
 gi|119361602|sp|Q2S2U3|RF1_SALRD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|83757599|gb|ABC45712.1| peptide chain release factor 1 [Salinibacter ruber DSM 13855]
 gi|294343702|emb|CBH24480.1| peptide chain release factor 1 [Salinibacter ruber M8]
          Length = 357

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 104/347 (29%), Positives = 182/347 (52%), Gaps = 12/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   + +   DP +  +    + L +E   L+  +  I   +  L +   L  +
Sbjct: 7   LDKVKHRFQEVESLMADPEVANDPDRMRELGQEHSRLEEVVEAIDRYERLLDERDELEGM 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYLEVHAGAGGTESQD 132
             +E          +  Q        ++    + +     +  +A +E+ AGAGG E+  
Sbjct: 67  IRDESGEMEALAKEELEQLETKLPAVEEDLKQKLIPKDPEEEKNAIVEIRAGAGGDEASL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L R+YT++A+++ +  E ++   G + G +     +KG + YG LK E GVHR+ R
Sbjct: 127 FAGDLFRLYTQYAKQQGWTYELIDASPGTQGGFREVIFAVKGEDVYGTLKYEAGVHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S+ R HTS +++ V P   + ++++I+ SD  I+T++A+G GGQ VNTTDSAVRI
Sbjct: 187 VPETESSGRIHTSAATVAVLP-EAEEVDVDINPSDLTIETFKATGPGGQSVNTTDSAVRI 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311
            H P+GV V CQ E+SQHKN+++A  +LR+++Y  E ++ E+ A   E+ ++ +G G + 
Sbjct: 246 KHAPSGVEVSCQDEKSQHKNRSKAMRVLRSRVY--EKKREEQQAEREEARRSMVGSGDRS 303

Query: 312 --IRSYVLQPYQMVKDLRT--NIEKTSPSDVLDGDLDDFMKATLAIK 354
             IR+Y   P   V D R     +  S   ++DG++D  + A  A +
Sbjct: 304 AKIRTYNF-PQDRVTDHRLEGGQKNHSLQPIMDGEIDPIIDALRAEE 349


>gi|322379487|ref|ZP_08053853.1| Peptide chain release factor RF-2 [Helicobacter suis HS1]
 gi|322380468|ref|ZP_08054667.1| peptide chain release factor 2 [Helicobacter suis HS5]
 gi|321147113|gb|EFX41814.1| peptide chain release factor 2 [Helicobacter suis HS5]
 gi|321148094|gb|EFX42628.1| Peptide chain release factor RF-2 [Helicobacter suis HS1]
          Length = 382

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 158/352 (44%), Positives = 223/352 (63%), Gaps = 4/352 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +    +L  +  +  DP  WQ+   A    +E+  ++  +   +  
Sbjct: 25  LQNKCHNIAQIIKPEGLKVQLEQITQEQVDPAFWQDKTLAAQKNQEKMRIERLLQTYEHT 84

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +  L     L    L ++D   L +  +   ++   V+  +   +L+ + DS DA + + 
Sbjct: 85  KHTLE--EALELFELIQEDTQALTQLFEEAPKLAARVQSMEVSVMLANDQDSMDAIVSIQ 142

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            G GGTESQDWA+ML RMY RWAE++ FK E L+  +GEEAGIK    +I+G N YG++K
Sbjct: 143 PGVGGTESQDWASMLYRMYLRWAERKGFKVELLDYQEGEEAGIKGVAFVIRGVNVYGYMK 202

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E G+HRLVR+SP+++N +RHTSF+S+ V P VDD I I I E D R+DTYRASGAGGQH
Sbjct: 203 NENGIHRLVRMSPFNANGKRHTSFASVQVSPEVDDDINIVIEEKDIRVDTYRASGAGGQH 262

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN T+SA+RITH  TG+VVQCQ +RSQHKNKA A  ML++KLYELEL K+ E +N+    
Sbjct: 263 VNKTESAIRITHFATGIVVQCQNDRSQHKNKAMALKMLKSKLYELELCKQREQSNM--EE 320

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K++IGWG QIRSYVL PYQ +KD R+ I  ++   +LDGDLD  M+  L  +
Sbjct: 321 KSDIGWGHQIRSYVLAPYQQIKDARSEIAYSNVGAILDGDLDTLMEDVLVSR 372


>gi|24379522|ref|NP_721477.1| peptide chain release factor 1 [Streptococcus mutans UA159]
 gi|32171546|sp|Q8DU64|RF1_STRMU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|24377463|gb|AAN58783.1|AE014946_8 putative peptide chain release factor 1 [Streptococcus mutans
           UA159]
          Length = 359

 Score =  213 bits (541), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 163/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  + +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANSRETVAVYREYKQVVQNIADAQEM 66

Query: 76  ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +      L+E +    +      +   E  +F  L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDPELEEMAKEELKNSKVAKEEYEEKLRFLLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + +K E +E       G+K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLNMYQKYAENQGWKFEVMEASANGVGGLKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E EI   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ +G G 
Sbjct: 246 RIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILYDQ 350


>gi|269959607|ref|ZP_06173988.1| peptide chain release factor 2 [Vibrio harveyi 1DA3]
 gi|269835665|gb|EEZ89743.1| peptide chain release factor 2 [Vibrio harveyi 1DA3]
          Length = 260

 Score =  213 bits (541), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 152/258 (58%), Positives = 196/258 (75%), Gaps = 1/258 (0%)

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++ ++E  +F  + SG+ DS+D Y+++ AG+GGTE+QDW NM+LRMY RWAE + FK E 
Sbjct: 1   MEQKLEQLEFRRMFSGDHDSSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKAEV 60

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E+ +GE AG+K AT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP 
Sbjct: 61  IEVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPE 120

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +D++I I+I+ SD RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK 
Sbjct: 121 IDENIAIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKD 180

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           QA   LRAKL+ELELQK+       E +K++IGWG QIRSYVL     +KDLRT +E  +
Sbjct: 181 QAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRN 239

Query: 335 PSDVLDGDLDDFMKATLA 352
              VLDGDLD F++A+L 
Sbjct: 240 TQAVLDGDLDKFIEASLK 257


>gi|302521935|ref|ZP_07274277.1| peptide chain release factor 1 [Streptomyces sp. SPB78]
 gi|318060718|ref|ZP_07979441.1| peptide chain release factor 1 [Streptomyces sp. SA3_actG]
 gi|318075509|ref|ZP_07982841.1| peptide chain release factor 1 [Streptomyces sp. SA3_actF]
 gi|333024405|ref|ZP_08452469.1| putative peptide chain release factor 1 [Streptomyces sp. Tu6071]
 gi|302430830|gb|EFL02646.1| peptide chain release factor 1 [Streptomyces sp. SPB78]
 gi|332744257|gb|EGJ74698.1| putative peptide chain release factor 1 [Streptomyces sp. Tu6071]
          Length = 357

 Score =  213 bits (541), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 116/349 (33%), Positives = 177/349 (50%), Gaps = 15/349 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +  +   + L  K  DP +  +   A+ L +    L   +   +  +    D   
Sbjct: 1   MFEAVEELIGEHAELEQKLADPSVHADQANARRLSKRYAELTPIVGTYRAWRATGDDIAT 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             ELA E+ + +   +  D  +  +   E  +   +    +D  D  LE+ AGAGG ES 
Sbjct: 61  ARELAAEDPEFAAEVKELDERR--EELTEKLRLLLVPRDPSDEKDVILEIKAGAGGDESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG---------PNAYGWLK 182
            +A  LLRMY R+AE+  +KTE L+  + E  G K   + +K             +  +K
Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEILDATESELGGYKDVQVAVKTKGNANPEPGQGVWARMK 178

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHR+ R+   +S  R HTS + + V P   + +++EI+ +D RID YR+SG GGQ 
Sbjct: 179 YEGGVHRVQRVPSTESQGRIHTSAAGVLVTP-EAEEVDVEINPNDLRIDVYRSSGPGGQS 237

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR++L     ++ E  A     S
Sbjct: 238 VNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREAADARRS 297

Query: 303 KTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +   +    +IR+Y   P   + D R   +  +   VLDGDLD  ++A 
Sbjct: 298 QVRTVDRSEKIRTYNF-PENRISDHRVGYKAYNLDQVLDGDLDAVIQAC 345


>gi|315497942|ref|YP_004086746.1| peptide chain release factor 1 [Asticcacaulis excentricus CB 48]
 gi|315415954|gb|ADU12595.1| peptide chain release factor 1 [Asticcacaulis excentricus CB 48]
          Length = 358

 Score =  213 bits (541), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 109/346 (31%), Positives = 173/346 (50%), Gaps = 14/346 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---DNLIL 72
            D  V R   +  + E      +  E   L +E   L   +  +  +        +   L
Sbjct: 9   LDQVVDRFRMIEARMESAT---DGTEIVKLSKEHAELKPVVDAVTALLKARASGPELEEL 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           + L   E      +E  +  +R+               + ++  A LEV AG GG E+  
Sbjct: 66  IALNDPELSPLAQEEFQELKERLPELERGVALLLAPKDKDENASAILEVRAGTGGDEAAL 125

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+A  + ++ E   I +G+  G K     + G   +G LK E GVHR+ R
Sbjct: 126 FAGDLFRMYSRYAASQGWRVEIDSISEGDAGGYKEIIASVTGDGVFGKLKFESGVHRVQR 185

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P   + +EI+I + D RIDTYRASG+GGQHVN TDSAVRI
Sbjct: 186 VPATEAGGRIHTSAATVAVLP-EAEDVEIDIQDKDIRIDTYRASGSGGQHVNKTDSAVRI 244

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+V     E+SQH N+  A   L+A+LY+++ Q  +   +     K+++G G   
Sbjct: 245 THLPTGIVATSS-EKSQHMNRQIAMRNLKARLYDIQRQALDAARSDA--RKSQVGSGDRS 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+   + S  ++G++D  + A +A  +
Sbjct: 302 ERIRTYNY-PQGRVSDHRINLTLYNLSQFMEGEMDQMINALIADDQ 346


>gi|198276935|ref|ZP_03209466.1| hypothetical protein BACPLE_03140 [Bacteroides plebeius DSM 17135]
 gi|198270460|gb|EDY94730.1| hypothetical protein BACPLE_03140 [Bacteroides plebeius DSM 17135]
          Length = 369

 Score =  213 bits (541), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 94/353 (26%), Positives = 161/353 (45%), Gaps = 18/353 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   ++T   DP++  +      L +E + L + ++  KE    +        +
Sbjct: 11  LEGLVSRFEEVSTLITDPNVIADQKRYVKLTKEYKELGDLMAARKEYLQCINGLEEAKMM 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES---LLSGEADSNDAYLEVHAGAGGTESQD 132
             E D         +         E ++      + +   D  +A LE+  G GG E+  
Sbjct: 71  MSENDPEMKEMAREEAASCEARIPELEEEIKLLLVPADPQDDRNAILEIRGGTGGDEAAI 130

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++ E + +K E    ++G   G K     + G   YG LK E GVHR+ R
Sbjct: 131 FAGDLFRMYSKYCESKGWKLEVSSANEGAAGGFKEIICSVTGEKVYGTLKYESGVHRVQR 190

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +S+ V P  +      I+E + + DT+R+ GAGGQ+VN  +S VR+
Sbjct: 191 VPATETQGRVHTSAASVAVLPEAEPFDVE-INEGEIKWDTFRSGGAGGQNVNKVESGVRL 249

Query: 253 THIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            +            ++++C + R Q KNK +A + LR  +Y+ E QK   I +I    KT
Sbjct: 250 RYNWKNPNTGIVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRKT 307

Query: 305 EIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +  G +   IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 308 MVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 359


>gi|260427219|ref|ZP_05781198.1| peptide chain release factor 1 [Citreicella sp. SE45]
 gi|260421711|gb|EEX14962.1| peptide chain release factor 1 [Citreicella sp. SE45]
          Length = 349

 Score =  213 bits (541), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 117/341 (34%), Positives = 177/341 (51%), Gaps = 14/341 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +R  +L  +  +     ++     L RE   L   +  I E      D     E+
Sbjct: 7   LQQIRERFEYLEARMAEGG--GDIA---ALGREYAELKPVVDQIAEWNRLQADLTEAEEM 61

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +  ++ +E    L+       +  Q   L    AD+  A LE+  G GG E+  +A
Sbjct: 62  LADPEMKALAEEELPALRARLPEAEKALQLALLPRDAADARPAILEIRPGTGGEEAALFA 121

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R++E R ++ E +E  D E  G+K   + I+G N +  LK E GVHR+ R+ 
Sbjct: 122 GDLARMYQRYSEARGWRWEVIEEQDTELGGLKELVVRIEGENVFARLKFESGVHRVQRVP 181

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   ++++I+I+  D RIDT R+SGAGGQHVNTTDSAVRITH
Sbjct: 182 ETESGGRIHTSAATVAVLP-EAEAVDIDIASGDLRIDTMRSSGAGGQHVNTTDSAVRITH 240

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV    E+SQH+N+  A N+LRA+LY++E QK           + ++G G    +
Sbjct: 241 LPTGLVVTSS-EKSQHRNREIAMNVLRARLYDMERQK--ADDARASDRRAQVGSGDRSER 297

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R  +       +L GDLD+ + A  A
Sbjct: 298 IRTYNF-PQGRMTDHRIGLTLYRLEAILSGDLDEIVDALTA 337


>gi|290957365|ref|YP_003488547.1| peptide chain release factor 1 (RF-1) [Streptomyces scabiei 87.22]
 gi|260646891|emb|CBG69988.1| peptide chain release factor 1 (RF-1) [Streptomyces scabiei 87.22]
          Length = 358

 Score =  213 bits (541), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 116/350 (33%), Positives = 175/350 (50%), Gaps = 16/350 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +  V   + L  K  DP +  +   A+ L +    L   +   +  +    D   
Sbjct: 1   MFEAVEELVGEHADLEKKLADPSVHADQANARKLNKRYAELTPIVGTYRTWKQTGDDIDT 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E     DD   + E  +  ++ +   E  +   +    +D  D  LE+ AGAGG ES 
Sbjct: 61  AREF--AADDPDFIAEVKELEKQREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG----------PNAYGWL 181
            +A  LLRMY R+AE+  +KTE ++  + E  G K   + +K              +  L
Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDSTESELGGYKDVQVAVKTKGGQGATEPGQGVWARL 178

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   +S  R HTS + + V P   + +++EI+ +D RID YR+SG GGQ
Sbjct: 179 KYEGGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEVDVEINANDLRIDVYRSSGPGGQ 237

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITHIPTGVV  CQ E+SQ +NK QA  +LR++L     ++ E  A     
Sbjct: 238 SVNTTDSAVRITHIPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAEREAADARR 297

Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           S+   +    +IR+Y   P   + D R   +  +   VLDG+LD  ++A 
Sbjct: 298 SQVRTVDRSEKIRTYNF-PENRISDHRVGFKSYNLDQVLDGELDAVIQAC 346


>gi|306833419|ref|ZP_07466546.1| peptide chain release factor RF1 [Streptococcus bovis ATCC 700338]
 gi|304424189|gb|EFM27328.1| peptide chain release factor RF1 [Streptococcus bovis ATCC 700338]
          Length = 359

 Score =  213 bits (541), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 99/348 (28%), Positives = 165/348 (47%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E  +    ++  +E +  L +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMALSKEEANTRETVTVYREYKQILQNIEDAEEM 66

Query: 76  ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +      L+E +    +      +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKDAGGDPELEEMAKEELKDSKASKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A+ LL+MY ++AE + +K + +E       GIK   +++ G + Y  LK E G HR+
Sbjct: 127 ALFASDLLQMYQKYAENQGWKFDVMEASYNGVGGIKEVVVMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E EI   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +   Q  +   +     K+ IG G 
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQNEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVIDALILFDQ 350


>gi|153008371|ref|YP_001369586.1| peptide chain release factor 1 [Ochrobactrum anthropi ATCC 49188]
 gi|166223580|sp|A6WXQ3|RF1_OCHA4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|151560259|gb|ABS13757.1| peptide chain release factor 1 [Ochrobactrum anthropi ATCC 49188]
          Length = 357

 Score =  213 bits (541), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 118/348 (33%), Positives = 185/348 (53%), Gaps = 18/348 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L   +  I+E+ D   + + L  +
Sbjct: 10  DQLLKRFSMIESQMANNP----DSETYVKLASEYSELQEVVGKIRELTDSRKEAVDLAAM 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  +        +      +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 66  RDDASTDAEMRALALEELPGVEKRIEGLEQEVQILLLPKDAADEKNAILEIRAGTGGLEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 126 ALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 186 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK        ES ++++G G 
Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--ADTERSESRRSQVGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V++GDLD+ + A ++  +
Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELVDALISDHQ 348


>gi|88596258|ref|ZP_01099495.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|88191099|gb|EAQ95071.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           84-25]
          Length = 355

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 114/345 (33%), Positives = 178/345 (51%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +R   LN+      +  ++ +   L +E+++L+  +   KE    L +      L
Sbjct: 6   LDPFFKRFEELNSLLSSSDILNDISKMTTLSKEQKNLEPIVLKAKEYLKTLDNIEENKAL 65

Query: 76  ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +      +E     +      E  +   L     D  + +LE+ AG GG E+  + 
Sbjct: 66  LNDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGTGGDEASLFV 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L++ Y R+AE R +K E +   +G   G K   +L+KG  AY  LK E G HR+ R+ 
Sbjct: 126 GDLIKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHRVQRVP 185

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P   D IEIEI+ +D ++D  R+SG GGQ VNTTDSAVRITH
Sbjct: 186 QTESQGRVHTSAITVAVMP-EVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV  Q  +SQHKNK  A  +L+A+LY  E+Q+ E +A   E+ K+++G G    +
Sbjct: 245 IPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQESERLAKESEARKSQVGSGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++ DG  D+ ++  +   +
Sbjct: 303 IRTYNF-PQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQ 346


>gi|239928894|ref|ZP_04685847.1| peptide chain release factor 1 [Streptomyces ghanaensis ATCC 14672]
 gi|291437221|ref|ZP_06576611.1| peptide chain release factor 1 [Streptomyces ghanaensis ATCC 14672]
 gi|291340116|gb|EFE67072.1| peptide chain release factor 1 [Streptomyces ghanaensis ATCC 14672]
          Length = 355

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 117/347 (33%), Positives = 176/347 (50%), Gaps = 13/347 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +  V   + L  K  DP +  +   A+ L +    L   ++  +  +    D   
Sbjct: 1   MFEAVEELVAEHADLEKKLADPSVHSDQANARRLNKRYAELTPIVATYRSWRQTGDDIET 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EL    DD     E  +  Q+ +   E  +   +    +D  D  LE+ AGAGG ES 
Sbjct: 61  AREL--AADDPDFAAEVRELEQQREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP-------NAYGWLKGE 184
            +A  LLRMY R+AE+  +KTE ++  + E  G K   + +K           +  LK E
Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVAVKARGQVEPGQGVWARLKYE 178

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS + + V P   + +++EI+ +D RID YR+SG GGQ VN
Sbjct: 179 GGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEVDVEINPNDLRIDVYRSSGPGGQSVN 237

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR++L  +  ++ E  A     S+ 
Sbjct: 238 TTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRSRLLAMAQEEAEREAADARRSQV 297

Query: 305 E-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +    +IR+Y   P   + D R   +  +   VLDGDL   ++A 
Sbjct: 298 RTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLGAVIQAC 343


>gi|46199879|ref|YP_005546.1| peptide chain release factor 1 [Thermus thermophilus HB27]
 gi|55981909|ref|YP_145206.1| peptide chain release factor 1 [Thermus thermophilus HB8]
 gi|2500140|sp|P96077|RF1_THET8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|81567592|sp|Q72HB8|RF1_THET2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|88192257|pdb|2B64|Y Chain Y, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf1
           From A Crystal Structure Of The Whole Ribosomal Complex.
           This File Contains The 30s Subunit, Trnas, Mrna And
           Release Factor Rf1 From A Crystal Structure Of The Whole
           Ribosomal Complex". The Entire Crystal Structure
           Contains One 70s Ribosome, Trnas, Mrna And Release
           Factor Rf1 And Is Described In Remark 400.
 gi|209156517|pdb|3D5A|X Chain X, Structural Basis For Translation Termination On The 70s
           Ribosome. This File Contains The 30s Subunit, Release
           Factor 1 (Rf1), Two Trna, And Mrna Molecules Of One 70s
           Ribosome. The Entire Crystal Structure Contains Two 70s
           Ribosomes As Described In Remark 400.
 gi|209156573|pdb|3D5C|X Chain X, Structural Basis For Translation Termination On The 70s
           Ribosome. This File Contains The 30s Subunit, Release
           Factor 1 (Rf1), Two Trna, And Mrna Molecules Of The
           Second 70s Ribosome. The Entire Crystal Structure
           Contains Two 70s Ribosomes As Described In Remark 400.
 gi|300508626|pdb|3MR8|V Chain V, Recognition Of The Amber Stop Codon By Release Factor Rf1.
           This Entry 3mr8 Contains 30s Ribosomal Subunit. The 50s
           Ribosomal Subunit Can Be Found In Pdb Entry 3ms1.
           Molecule B In The Same Asymmetric Unit Is Deposited As
           3mrz (50s) And 3ms0 (30s).
 gi|300508681|pdb|3MS0|V Chain V, Recognition Of The Amber Stop Codon By Release Factor Rf1.
           This Entry 3ms0 Contains 30s Ribosomal Subunit. The 50s
           Ribosomal Subunit Can Be Found In Pdb Entry 3mrz.
           Molecule A In The Same Asymmetric Unit Is Deposited As
           3mr8 (30s) And 3ms1 (50s).
 gi|1785848|dbj|BAA13349.1| peptide chain release factor 1 [Thermus thermophilus]
 gi|46197506|gb|AAS81919.1| peptide chain release factor 1 [Thermus thermophilus HB27]
 gi|55773322|dbj|BAD71763.1| peptide chain release factor 1 (RF-1) [Thermus thermophilus HB8]
          Length = 354

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 108/329 (32%), Positives = 165/329 (50%), Gaps = 8/329 (2%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSI-LQETS 89
            DP + ++    + L R    +   I  I+E +  L D      L  + +   +   E  
Sbjct: 20  SDPEVLKDKGRYQSLSRRYAEMGEVIGLIREYRKVLEDLEQAESLLDDPELKEMAKAERE 79

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L R +   +  +   L     D  DA +E+ AG GG E+  +A  L  MY R+AE+  
Sbjct: 80  ALLARKEALEKELERHLLPKDPMDERDAIVEIRAGTGGEEAALFARDLFNMYLRFAEEMG 139

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           F+TE L+ H  +  G       ++GP AYG  K E GVHR+ R+   ++  R HTS +++
Sbjct: 140 FETEVLDSHPTDLGGFSKVVFEVRGPGAYGTFKYESGVHRVQRVPVTETQGRIHTSTATV 199

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P   +  +  ++  + RID  RASG GGQ VNTTDSAVR+ H+PTG++V CQ  RSQ
Sbjct: 200 AVLP-KAEEEDFALNMDEIRIDVMRASGPGGQGVNTTDSAVRVVHLPTGIMVTCQDSRSQ 258

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDL 326
            KN+ +A  +LR++L  LE+++ EE   + ++   +IG G +   IR+Y   P   V D 
Sbjct: 259 IKNREKALMILRSRL--LEMKRAEEAERLRKTRLAQIGTGERSEKIRTYNF-PQSRVTDH 315

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R          VL G L   ++A     +
Sbjct: 316 RIGFTTHDLEGVLSGHLTPILEALKRADQ 344


>gi|302554164|ref|ZP_07306506.1| peptide chain release factor 1 [Streptomyces viridochromogenes DSM
           40736]
 gi|302471782|gb|EFL34875.1| peptide chain release factor 1 [Streptomyces viridochromogenes DSM
           40736]
          Length = 358

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 119/350 (34%), Positives = 173/350 (49%), Gaps = 16/350 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+     V   + L  K  DP +  +   A+ L +    L   ++  +       D   
Sbjct: 1   MFEAVAELVAEHADLEKKLADPSVHADQANARKLNKRYAELTPIVATYRSWTQTGDDIET 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EL    DD     E  D  Q+ +   E  +   +    +D  D  LE+ AGAGG ES 
Sbjct: 61  AREL--AADDPDFAAEVKDLEQQREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI----------KGPNAYGWL 181
            +A  LLRMY R+AE+  +KTE ++  + E  G K   + +           G   +  L
Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVAVKTKGGQGATEPGQGVWARL 178

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   +S  R HTS + + V P   + I++EI+ +D RID YR+SG GGQ
Sbjct: 179 KYEGGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEIDVEINPNDLRIDVYRSSGPGGQ 237

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR++L     ++ E  A     
Sbjct: 238 SVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREAADARR 297

Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           S+   +    +IR+Y   P   + D R   +  +   VLDGDL   ++A 
Sbjct: 298 SQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLGAVIQAC 346


>gi|325300471|ref|YP_004260388.1| Peptide chain release factor 1 [Bacteroides salanitronis DSM 18170]
 gi|324320024|gb|ADY37915.1| Peptide chain release factor 1 [Bacteroides salanitronis DSM 18170]
          Length = 370

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 97/353 (27%), Positives = 158/353 (44%), Gaps = 18/353 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   ++T   DP +  +      L +E + L + +    E    L        +
Sbjct: 12  LDGLVARFEEVSTLITDPSVIADQKRYVKLTKEYKELSDIMKARGEYLQCLNGLEEAKMM 71

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL---LSGEADSNDAYLEVHAGAGGTESQD 132
             E D         +         E ++   L    +   D  +A LE+  G GG E+  
Sbjct: 72  MGENDPELKEMAREEAAACEARIPELEEEIKLLLIPADPQDDRNAILEIRGGTGGDEAAI 131

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++ E++ +K E     +G   G K     + G   YG LK E GVHR+ R
Sbjct: 132 FAGDLFRMYSKYCERKGWKLEVSSASEGASGGFKEIICSVTGDKVYGTLKYESGVHRVQR 191

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +S+ V P  +      I+E + + DT+R+SGAGGQ+VN  +S VR+
Sbjct: 192 VPATETQGRVHTSAASVAVLPEAEPFDVE-INEGEIKWDTFRSSGAGGQNVNKVESGVRL 250

Query: 253 THIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            +            ++++C + R Q KNK +A   LR  +Y+ E QK   I +I    KT
Sbjct: 251 RYNWKNPNTGVVEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIASKRKT 308

Query: 305 EIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +  G +   IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 309 MVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360


>gi|296119521|ref|ZP_06838079.1| peptide chain release factor 1 [Corynebacterium ammoniagenes DSM
           20306]
 gi|295967404|gb|EFG80671.1| peptide chain release factor 1 [Corynebacterium ammoniagenes DSM
           20306]
          Length = 358

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 114/346 (32%), Positives = 173/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V     +  +  DP +  +  + + L +    L   I    ++     D     E+
Sbjct: 8   VDDIVSEYQGIEMQMADPEVASDQNQFRKLSKRYAELRPIIVVHTQLTQAKEDLSDAKEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D     E       +    E          E DS D  +E+ AGAGG E+  +A 
Sbjct: 68  --AYEDHDFQDEAERLEGVVLELEEQLADLLAPRDEHDSEDIIMEIKAGAGGEEAALFAA 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190
            L RMY R+A+K  F  E + I++ +  G+K  T+  K        A+   K E GVHR+
Sbjct: 126 DLARMYERYADKSGFSWEVIGINESDLGGVKDMTITFKSKTPSRDGAWSVFKFEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R  TS + + VYP  D+  E+ I E D R+D YR+SG GGQ VNTTDSAV
Sbjct: 186 QRVPVTESQGRIQTSAAGVLVYPEPDEVAEVHIDEKDLRVDVYRSSGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           R+TH+PTG+VV CQ+ERSQ +NKA+A  +L+A+L ++E + RE  A    +S+   +   
Sbjct: 246 RLTHLPTGLVVTCQRERSQIQNKARAMQVLQARLEQMEREAREAEAGEQRASQVRTMDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R   +  +   VLDGD+   + A  A ++
Sbjct: 306 ERIRTYNW-PENRITDHRIGYKANNLDSVLDGDMGSLIDALQAQER 350


>gi|294055591|ref|YP_003549249.1| peptide chain release factor 1 [Coraliomargarita akajimensis DSM
           45221]
 gi|293614924|gb|ADE55079.1| peptide chain release factor 1 [Coraliomargarita akajimensis DSM
           45221]
          Length = 362

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 169/344 (49%), Gaps = 13/344 (3%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D      +L+ L+ +  DP+ + +   A  + RE Q +   I   +         +    
Sbjct: 6   DIAPFRDKLADLDAQMADPNFYSDQRRAAEVSREHQRVSGLIERFEAFHSAQTQIVENEA 65

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFE-----SLLSGEADSNDAYLEVHAGAGGTE 129
           +  +      L+E +               +      +     DS ++ +E+  GAGG E
Sbjct: 66  MMADSSVEEELREMAAEEVEELKGQIETLEKDVLRAMVPPDATDSRNSVMEIRGGAGGDE 125

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMYTR+AE + ++ E +     E  G +     I G +AY  LK E GVHR
Sbjct: 126 ANIFAGDLYRMYTRYAEAKGWRVEVMSTSPAETGGYREIIFNISGEDAYKHLKFESGVHR 185

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R HTS +++ V P   + ++IEI+  D  I T RASGAGGQHVNTTDSA
Sbjct: 186 VQRVPVTETQGRIHTSTATVAVLP-EAEEVDIEINPQDLEISTMRASGAGGQHVNTTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           V + H PTGV V C  ERSQ KN+A+A  ++R++L  L+ +  EE A      K +IG G
Sbjct: 245 VMMVHKPTGVTVYCADERSQIKNRAKALTVMRSRL--LQAKVDEENAKYAAERKGQIGTG 302

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
               +IR+Y   P   + D R  +  +    V+DG LDD + A 
Sbjct: 303 DRSERIRTYNY-PQGRLTDHRIGMNLS-LPSVIDGALDDLIDAL 344


>gi|227877271|ref|ZP_03995344.1| peptide chain release factor RF1 [Lactobacillus crispatus JV-V01]
 gi|256842834|ref|ZP_05548322.1| peptide chain release factor 1 [Lactobacillus crispatus 125-2-CHN]
 gi|256848802|ref|ZP_05554236.1| peptide chain release factor 1 [Lactobacillus crispatus MV-1A-US]
 gi|262045800|ref|ZP_06018764.1| peptide chain release factor 1 [Lactobacillus crispatus MV-3A-US]
 gi|293381669|ref|ZP_06627650.1| peptide chain release factor 1 [Lactobacillus crispatus 214-1]
 gi|295692623|ref|YP_003601233.1| peptide chain release factor 1 [Lactobacillus crispatus ST1]
 gi|312977646|ref|ZP_07789393.1| peptide chain release factor 1 [Lactobacillus crispatus CTV-05]
 gi|227863127|gb|EEJ70573.1| peptide chain release factor RF1 [Lactobacillus crispatus JV-V01]
 gi|256614254|gb|EEU19455.1| peptide chain release factor 1 [Lactobacillus crispatus 125-2-CHN]
 gi|256714341|gb|EEU29328.1| peptide chain release factor 1 [Lactobacillus crispatus MV-1A-US]
 gi|260573759|gb|EEX30315.1| peptide chain release factor 1 [Lactobacillus crispatus MV-3A-US]
 gi|290921716|gb|EFD98737.1| peptide chain release factor 1 [Lactobacillus crispatus 214-1]
 gi|295030729|emb|CBL50208.1| Peptide chain release factor 1 [Lactobacillus crispatus ST1]
 gi|310895385|gb|EFQ44452.1| peptide chain release factor 1 [Lactobacillus crispatus CTV-05]
          Length = 362

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 101/347 (29%), Positives = 170/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V     L     DP +  +      + +E   L   +   K+ ++   +     E+
Sbjct: 8   LEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKEDKKEIEDNKEI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++   +    I+ E+   +       L     D  D  +E+   AGG E+ 
Sbjct: 68  ISSETDPDLIEMAKEENSEIEKEIPELEDQIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE++ +K   ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAERQNWKVSMIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + ++I+I   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMP-EYEQVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    + +  A      K  +G G  
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQ--AQYDAKRKNAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       V++G+LD+ + A +   +
Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQ 350


>gi|219850039|ref|YP_002464472.1| peptide chain release factor 1 [Chloroflexus aggregans DSM 9485]
 gi|254790871|sp|B8G7K1|RF1_CHLAD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219544298|gb|ACL26036.1| peptide chain release factor 1 [Chloroflexus aggregans DSM 9485]
          Length = 361

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 115/352 (32%), Positives = 172/352 (48%), Gaps = 14/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +   QR   L      P +  NV   +   RE++ L++ ++  +E Q        
Sbjct: 1   MFDKLEAVAQRYDELTQLMAQPEVATNVTLLQQYAREQRELEDIVTTYREYQAAQRAIAE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYLEVHAGAGGT 128
              +  E D         +   + K     ++      L     DS D  +E+  G GG 
Sbjct: 61  AEAMLDENDPELRALAQEELDTQRKRLATLEEQLKVLLLPRDPNDSKDVIMEIRQGEGGD 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMYTR+AE R +K E   + +    GIK     I G  AY  LK E GVH
Sbjct: 121 EAALFAADLFRMYTRFAESRGWKVEVDSLTENGIGGIKEVIFQIHGEGAYSQLKYEGGVH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS +++ V P V+++    I   D RID +R++G GGQ VNTTDS
Sbjct: 181 RVQRVPATEARGRIHTSTATVAVLPEVEETEIE-IKPEDLRIDVFRSAGHGGQGVNTTDS 239

Query: 249 AVRITHIP---TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           AVRI + P     +VV CQ  RSQ +N+ +A  +LRA+LY  E +KR+    IG S   +
Sbjct: 240 AVRIVYKPGTPEEIVVTCQDGRSQIQNRERAMTVLRARLYAREQEKRQ--REIGASRLAQ 297

Query: 306 IGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +G G +   IR+Y   P   + D R     ++   VLDG+LD  ++A +   
Sbjct: 298 VGSGERAEKIRTYNF-PQDRITDHRIGQNFSNLPAVLDGELDKIIEALIVYD 348


>gi|121996859|ref|YP_001001646.1| peptide chain release factor 2 [Halorhodospira halophila SL1]
 gi|121588264|gb|ABM60844.1| bacterial peptide chain release factor 2 (bRF-2) [Halorhodospira
           halophila SL1]
          Length = 291

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 160/289 (55%), Positives = 214/289 (74%), Gaps = 2/289 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           L D   ++ +A EE D   L+    ++QR+  +VE  +F  + SGE D+++A+L++ AG+
Sbjct: 2   LDDADEMVAMAREEGDAETLEAVQADIQRVAGQVETLEFRRMFSGEMDTSNAFLDIQAGS 61

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTE+QDWA MLLRMY RWAE R F+TE +E+  G+EAG+KSAT+ + G  A+GWL+ E 
Sbjct: 62  GGTEAQDWAEMLLRMYLRWAEARGFETEVIEVTAGQEAGVKSATIKVSGEYAFGWLRTET 121

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           GVHRLVR SP+DS  RRHTSFSS++V P + +++++IEI  SD R+D +RASGAGGQHVN
Sbjct: 122 GVHRLVRKSPFDSGGRRHTSFSSVFVSPEIDEENVDIEIDPSDLRVDVFRASGAGGQHVN 181

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TT+SAVRITH PTG+VVQ Q +RSQHKN+A A + LRAKLYELE+Q+R   A   E +K+
Sbjct: 182 TTESAVRITHEPTGIVVQSQNDRSQHKNRATAMSQLRAKLYELEMQRRRAEAEAQEDTKS 241

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 242 DIGWGNQIRSYVLD-QSRIKDLRTGVEIGNTQAVLDGHLDPFIQASLKA 289


>gi|218129333|ref|ZP_03458137.1| hypothetical protein BACEGG_00910 [Bacteroides eggerthii DSM 20697]
 gi|217988510|gb|EEC54831.1| hypothetical protein BACEGG_00910 [Bacteroides eggerthii DSM 20697]
          Length = 370

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 100/354 (28%), Positives = 167/354 (47%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   ++T   DP +  +      L +E + L + +   KE    L       E+
Sbjct: 11  LEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMKARKEYMQVLSGIEEAKEI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L   +      +       + +   DS +A LE+  GAGG E+ 
Sbjct: 71  IANETDAEMREMAREELDACQTRQPELEEQIKLLLVPADPQDSRNAILEIRGGAGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYT++ E + +K +    ++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 IFAGDLFRMYTKYCETKGWKLDISSANEGAAGGFKEIICSVTGDNVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P  ++   + I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +            ++++C + R Q KNK +A + LR  +Y+ E QK   I +I    K
Sbjct: 250 LRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRK 307

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T +  G +   IR+Y   P   + D R N    + S  +DGD+ D +   +  +
Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDGDIQDCIDHLIVAE 360


>gi|158426116|ref|YP_001527408.1| peptide chain release factor 1 [Azorhizobium caulinodans ORS 571]
 gi|158333005|dbj|BAF90490.1| peptide chain release factor 1 [Azorhizobium caulinodans ORS 571]
          Length = 357

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 116/345 (33%), Positives = 171/345 (49%), Gaps = 12/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R + +              E   L RE   L   +  ++ ++    D     EL
Sbjct: 10  LDQLVARHAEVEALLAAG---AEGEEYVRLGREFSDLSPVVEQVRALRAAERDLADAREL 66

Query: 76  ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +       E +     ++   +  +   L     D     LEV AG GG E+  +A
Sbjct: 67  LADPEMRDLAQSEVTRLEAELETLAKEVRLALLPKDAMDERGVILEVRAGTGGDEAALFA 126

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+A ++ +  E L   +G   G K     + G  AY  LK E GVHR+ R+ 
Sbjct: 127 GDLFRMYARYAAEKGWSVELLSESEGTVGGYKEVVAAVHGRGAYARLKFESGVHRVQRVP 186

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +++ R HTS +++ V P   + ++++I+ESD RID YRA GAGGQHVN T+SAVRITH
Sbjct: 187 DTETSGRIHTSAATVAVLP-EAEDVDVDINESDLRIDVYRAQGAGGQHVNKTESAVRITH 245

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV  Q ERSQH+NKA+A  +LR+++ + E QK    AN     K ++G G    +
Sbjct: 246 IPTGMVVAVQDERSQHRNKARAMALLRSRMLDEERQK--ADANRAADRKGQVGSGDRSER 303

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           IR+Y   P   V D R N+      +V+ G  LD+ +   L   +
Sbjct: 304 IRTYNF-PQGRVTDHRINLTLYKLDEVMTGQALDEIIDPLLTEHQ 347


>gi|325954306|ref|YP_004237966.1| peptide chain release factor 1 [Weeksella virosa DSM 16922]
 gi|323436924|gb|ADX67388.1| Peptide chain release factor 1 [Weeksella virosa DSM 16922]
          Length = 362

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 94/347 (27%), Positives = 165/347 (47%), Gaps = 12/347 (3%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           GL D      QR   +      P +  +      L +E   L + +   +E +  L    
Sbjct: 5   GLLDKLRAIKQRFDEVADLIIQPDIITDQARYAKLNKEYSDLRDYVEKQEEYEGLLNVLE 64

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAG 126
               +  +  D  +++           ++   + E           D  +  +E+ AG G
Sbjct: 65  EANAIIADGSDEEMVELAKLEKDEALHKIPKLEEEIKFMLIPKDPEDDKNVIVELRAGTG 124

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +   + RMY  + +++ ++ E L   +    G K   + ++G   YG +K E G
Sbjct: 125 GDEAAIFVEDIYRMYAMYFKQKGWQHEVLNTSEASGKGFKEMVISVEGNAVYGTMKYESG 184

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS  ++ V P   + +++EI+ +D    T R+SGAGGQ+VN  
Sbjct: 185 VHRVQRVPETESQGRVHTSAITVAVLP-EAEEVDVEINPADLEYQTARSSGAGGQNVNKV 243

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++ V++TH P+G+V+ CQ+ RSQHKN+ +A  +LR KLYE+E +K+       E  K+ +
Sbjct: 244 ETKVQLTHKPSGIVIVCQEARSQHKNREKALQLLRTKLYEIEFEKKHAER--SEQRKSLV 301

Query: 307 GWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             G +   IR+Y   P   V D R N    +  + ++GD+ + + A 
Sbjct: 302 STGDRSAKIRTYNY-PQGRVTDHRINKSIYNLDNFMNGDIQEMIDAL 347


>gi|237753220|ref|ZP_04583700.1| peptide chain release factor 1 [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229375487|gb|EEO25578.1| peptide chain release factor 1 [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 356

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 107/341 (31%), Positives = 176/341 (51%), Gaps = 9/341 (2%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           ++R   ++T   DP++  ++     L +E+  L+  +   +   + L        L  ++
Sbjct: 10  IKRYDEISTLLVDPNILNDIKRITELSKEQSDLEELVEKARAYLNNLQSIEENKALLDDK 69

Query: 80  DDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +   + +E     + +        +   L     D  + YLE+ AG GG E+  +   L 
Sbjct: 70  ELGDLAKEEIKETETQNVKLEAEIKVLLLPKDPNDDKNIYLELRAGTGGDEAGIFVGDLF 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           R Y R+A+ + +K E +   +    G K    L+KG  AY  LK E G HR+ R+   +S
Sbjct: 130 RAYVRYADLKGWKVEIISSSENSVGGYKEIIALVKGKGAYSRLKYEGGTHRVQRVPATES 189

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS  ++ + P   D +E+ I+ +D RI+ +RA G GGQ VNTTDSAVRITHIPTG
Sbjct: 190 QGRVHTSAITVAIMP-EVDDVEVVINPNDLRIEVFRAGGHGGQCVNTTDSAVRITHIPTG 248

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315
           + V  Q E+SQHKNK +A  +L+A++YE EL+ + E     E+ K+++G G    +IR+Y
Sbjct: 249 ISVSMQDEKSQHKNKDKAMKILKARIYEAELEAQME--QNAEARKSQVGSGDRSERIRTY 306

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
              P   + D R  +   S  +++  G+LD  +   +A  +
Sbjct: 307 NY-PQNRLTDHRVGLTLYSLEEIMLSGNLDSVIDPIVAYFQ 346


>gi|86742401|ref|YP_482801.1| peptide chain release factor 1 [Frankia sp. CcI3]
 gi|119361540|sp|Q2J6M0|RF1_FRASC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|86569263|gb|ABD13072.1| bacterial peptide chain release factor 1 (bRF-1) [Frankia sp. CcI3]
          Length = 357

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 115/339 (33%), Positives = 173/339 (51%), Gaps = 12/339 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + +  +  DP +  +  +A+ L R    L   +   +E+     D     EL
Sbjct: 5   LDGLIAEHAEIEGQLADPAVHNDPAKARALSRRYAQLAPVVDLARELDRVEGDLAAAREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           AL +       +          +        +     D+ DA LEV AGAGG ES  +A 
Sbjct: 65  ALLDPSFRDEVQDLGEELARLNDRLRAYL--VPIDPDDARDAILEVKAGAGGEESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVH 188
            LLRMY R+AE+R +KTE L+ +  +  G +  ++ +        G   YG L+ E GVH
Sbjct: 123 DLLRMYLRYAERRGWKTEILDANPSDLGGYRDVSVAVKARGPAGPGDGVYGRLRFEGGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V P   + +++EI  +D RID +R+SG GGQ VNTTDS
Sbjct: 183 RVQRVPVTESAGRIHTSAAGVLVLP-EAEEVDVEIDPNDLRIDVFRSSGPGGQSVNTTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307
           AVRITHIPTGVVV CQ E+SQ +NK  A  +LRA+L     +K E  A++  +S+   + 
Sbjct: 242 AVRITHIPTGVVVSCQNEKSQLQNKESALRILRARLLGAAREKAESEASLARASQVRTVD 301

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
              ++R+Y       + D R   +  +   VLDG+LD+ 
Sbjct: 302 RSERVRTYNFA-ENRISDHRVGYKAHNLDQVLDGELDEV 339


>gi|332534752|ref|ZP_08410580.1| peptide chain release factor 2 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332035839|gb|EGI72323.1| peptide chain release factor 2 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 248

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 153/246 (62%), Positives = 189/246 (76%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG  DSNDAYL++ +G+GGTE+QDW N+LLRMY RW E + FK E +E  DG+ AGIK
Sbjct: 1   MFSGPHDSNDAYLDLQSGSGGTEAQDWCNILLRMYLRWGEAKGFKVELVEATDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            AT+   G  AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S +VYP +DD+IEI+I+ S
Sbjct: 61  GATVRFVGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFVYPEIDDNIEIDINPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ ERSQHKNKAQA   L+AKL+E
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNERSQHKNKAQAMKQLKAKLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LELQ++       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDG+LD F
Sbjct: 181 LELQQQNAEKQTQEDAKSDIGWGSQIRSYVLDD-ARIKDLRTGVENRNTQSVLDGNLDKF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|282158488|gb|ADA77879.1| peptide chain release factor 2 [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 248

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 148/246 (60%), Positives = 189/246 (76%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY RWA+   FK    ++ DG+ AGIK
Sbjct: 1   MFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGFKVTVDDVSDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
             TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S+++ P VDD I+IEI+ +
Sbjct: 61  GCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVFISPEVDDDIDIEINPT 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQHKN+  A   L++KLYE
Sbjct: 121 DLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQHKNRDNAMKQLKSKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +ELQKR    N  E SK +IGWG QIRSYVL     +KDLRT +E T+   VLDGDLD F
Sbjct: 181 MELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIKDLRTGVENTNTQAVLDGDLDKF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|328472050|gb|EGF42927.1| peptide chain release factor 2 [Vibrio parahaemolyticus 10329]
          Length = 248

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 150/246 (60%), Positives = 190/246 (77%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ DS+D Y+++ AG+GGTE+QDW NM+LRMY RWAE + FK E +E+ +GE AG+K
Sbjct: 1   MFSGDHDSSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKAEVIEVSEGEVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP +D++I I+I+ +
Sbjct: 61  SATVRISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEIDENIAIDINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+E
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LELQK+       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F
Sbjct: 181 LELQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|154490829|ref|ZP_02030770.1| hypothetical protein PARMER_00746 [Parabacteroides merdae ATCC
           43184]
 gi|154088577|gb|EDN87621.1| hypothetical protein PARMER_00746 [Parabacteroides merdae ATCC
           43184]
          Length = 369

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 94/353 (26%), Positives = 158/353 (44%), Gaps = 18/353 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   ++T   DP++  +      L +E + L+  I   KE    L        +
Sbjct: 11  LDGLVSRFEEVSTLITDPNVIADQKRYVKLTKEYKELNEIIKARKEYMQCLNGLEEARLM 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES---LLSGEADSNDAYLEVHAGAGGTESQD 132
             E D         +         E ++      + +   D  +A +E+  G GG E+  
Sbjct: 71  MAETDPEMREIAREEAAACEARIPELEEEIKLLLVPADPQDDKNAIVEIRGGTGGDEAAL 130

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY ++ E + +K       +G   G K     + G   YG LK E GVHR+ R
Sbjct: 131 FAGDLYRMYVKYCEMKGWKVALSSCSEGAAGGFKEIIFTVSGEKVYGTLKYESGVHRVQR 190

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P  D+     I+E + + DT+R+ GAGGQ+VN  +S VR+
Sbjct: 191 VPATETQGRVHTSAATVAVLPEADEFDVE-INEGEIKWDTFRSGGAGGQNVNKVESGVRL 249

Query: 253 THIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            ++           ++++C + R Q KNK +A   LR+ +Y+ E QK  +  +I    KT
Sbjct: 250 RYVWKNPNTGVSEEILIECTETRDQPKNKERALTRLRSFIYDKEHQKYLD--DIANKRKT 307

Query: 305 EIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +  G +   IR+Y   P   + D R N    + S  +DGD+   +   +  +
Sbjct: 308 MVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDGDIQGCLDQLIVAE 359


>gi|332994017|gb|AEF04072.1| protein chain release factor B, RF-2 [Alteromonas sp. SN2]
          Length = 248

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 157/246 (63%), Positives = 187/246 (76%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S   D+ND Y+++ +G+GGTE+QDWANMLLRMY RW E   FKTE +E+ DG+ AGIK
Sbjct: 1   MFSQPNDANDCYIDIQSGSGGTEAQDWANMLLRMYLRWGEAHGFKTELIEVSDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SATL I G  A+GWL+ E GVHRLVR SP+DS +RRHTSFSS +VYP VDD I+I+I  S
Sbjct: 61  SATLRIAGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSSAFVYPEVDDDIDIDIDPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQHVN TDSAVRITH PTG+VVQCQ +RSQHKNK QA   L+AKLYE
Sbjct: 121 DLRIDTYRASGAGGQHVNRTDSAVRITHEPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            ELQK+       E SK++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F
Sbjct: 181 YELQKQNAEKQAMEDSKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGGLDKF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|257457982|ref|ZP_05623141.1| peptide chain release factor 1 [Treponema vincentii ATCC 35580]
 gi|257444695|gb|EEV19779.1| peptide chain release factor 1 [Treponema vincentii ATCC 35580]
          Length = 355

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 183/347 (52%), Gaps = 12/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   R   L  + +DP L +N    K  MRE  +L   +    +      + +    +
Sbjct: 5   LESLSVRWKELEEEIQDPALIKNQNRYKEAMREHAYLSKLMEEYAQYLRFEQEIIQTRAM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  + +   + L  ++ ++E  +       +     +  +  +E+  G GG E+ 
Sbjct: 65  MQEETDHELKEMAREELHNLEAQLEQSENNLKVLLIPPDPLEEKNIIMEIRGGTGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LL+MYT +AE + +K E L  ++ E  G K  TL I G   YG L+ E GVHR+ 
Sbjct: 125 LFAADLLKMYTHYAELKNWKYEILSSNETELGGFKEVTLSISGKYVYGSLRYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   + + R HTS  ++ V P  +++  + I + D RID  RA G GGQ VNTTDSAVR
Sbjct: 185 RVPETEGSGRIHTSAVTVAVLPEAEETEIV-IKQEDLRIDVMRAGGPGGQCVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV CQ E+SQ KNKA+A  +LR++LY++E  K++      E  K ++G G  
Sbjct: 244 ITHIPTGLVVICQDEKSQIKNKAKAMRVLRSRLYDMEEAKKQSER--AEDRKNQVGSGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA-TLAIK 354
             +IR+Y   P   V D R N+       ++ GDL++ ++A  +A +
Sbjct: 302 SERIRTYNY-PQNRVTDHRINLTLYKLDTIMQGDLNEIVEALCIAAR 347


>gi|32474334|ref|NP_867328.1| peptide chain release factor 2 [Rhodopirellula baltica SH 1]
 gi|32444872|emb|CAD74874.1| peptide chain release factor 2 (RF-2) [Rhodopirellula baltica SH 1]
 gi|327543020|gb|EGF29467.1| peptide chain release factor 2 [Rhodopirellula baltica WH47]
          Length = 337

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 143/326 (43%), Positives = 212/326 (65%), Gaps = 3/326 (0%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P  W +   A+ ++ + + L   +S + E++    D   L E+A E++       + 
Sbjct: 1   MAAPDFWNDSESAQKVVMQLKGLKGIVSPLNELESSAEDLEALFEMADEDESIVDEVRS- 59

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             + R+++ ++  + ++LL+G  DS  A + ++A  GGT++ DWA+MLLRMY+ WA  ++
Sbjct: 60  -EIDRLEVVLDDLELKALLNGPNDSAGAIVTINARDGGTDANDWADMLLRMYSAWAVGQE 118

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K E L+  + EEAGI  A++ ++GP AYG+LKGE+G+HRLVRISP++S S+R TSF+++
Sbjct: 119 YKIELLDRQENEEAGINHASIAVRGPMAYGYLKGEEGMHRLVRISPFNSESKRQTSFAAV 178

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +DDSIE+ + + D R DTYRASGAGGQHVN TDSA+R+THIPT  VVQCQ +RSQ
Sbjct: 179 SVSPEIDDSIEVNVEKKDVREDTYRASGAGGQHVNKTDSAIRLTHIPTNTVVQCQNQRSQ 238

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTN 329
           H+N+  AW MLRAKL  +E ++RE        ++   G+G QIR+Y L P Q VKD RT 
Sbjct: 239 HQNRDTAWKMLRAKLARIEEERREAEEAKKYETQARTGFGSQIRNYFLHPDQRVKDARTG 298

Query: 330 IEKTSPSDVLDG-DLDDFMKATLAIK 354
               + + VLDG +L  F  A L +K
Sbjct: 299 HYVGNFNSVLDGSELQGFFDAFLRLK 324


>gi|16125109|ref|NP_419673.1| peptide chain release factor 1 [Caulobacter crescentus CB15]
 gi|13422113|gb|AAK22841.1| peptide chain release factor 1 [Caulobacter crescentus CB15]
          Length = 385

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 114/345 (33%), Positives = 180/345 (52%), Gaps = 13/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   +  +        +  E   L +E   L      ++ +     +   L  +
Sbjct: 37  LDQVLDRFREVEARMGAAT---DGAEIVKLSKEHAELRPVAEAVERLAKLSAERAELDVM 93

Query: 76  ALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           A + +   ++++    L                   + ++  A LEV AG GG E+  +A
Sbjct: 94  ASDPEMAEMVRDEIQALDEKLPVMERELALMLAPKDKDENASAILEVRAGTGGDEAALFA 153

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+A+ + ++ E   I +GE  G K     I G   +G LK E GVHR+ R+ 
Sbjct: 154 GDLFRMYQRYAQTQGWRVEIDSISEGEMGGFKEIVASITGDGVFGRLKFESGVHRVQRVP 213

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P   + +EIEI ESD RIDTYR+SGAGGQHVN TDSAVRITH
Sbjct: 214 ATEAQGRIHTSAATVAVLP-EAEDVEIEIKESDLRIDTYRSSGAGGQHVNKTDSAVRITH 272

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTGVVV    E+SQH+N+A+A   L+A+LY+++ +  +  +   E+ K+++G G    +
Sbjct: 273 LPTGVVVTSS-EKSQHQNRARAMKNLKARLYDMQREALD--SARSEARKSQVGSGDRSER 329

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           IR+Y   P   V D R N+   + + +++GD LDD +   +A  +
Sbjct: 330 IRTYNF-PQGRVTDHRINLTLYNLARIMEGDALDDVINPLIAEDQ 373


>gi|329121081|ref|ZP_08249712.1| peptide chain release factor RF1 [Dialister micraerophilus DSM
           19965]
 gi|327471243|gb|EGF16697.1| peptide chain release factor RF1 [Dialister micraerophilus DSM
           19965]
          Length = 359

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 106/346 (30%), Positives = 176/346 (50%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC----DNLI 71
                 R   L  K  DP + +N  + +   +E   L   ++  ++ +  +        I
Sbjct: 6   LQGIENRYLTLEDKLSDPSVIENQEKWRKFSKEHAELGEIVTLYRQYKKVVETQNAALEI 65

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L +   EE      ++  +  + I+          +     DS +  LE+ AG GG E+ 
Sbjct: 66  LNDKNQEELFELAKEDLKEAEKEIEKLEHQLHLLLIPKDPNDSRNVILEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   LL+MY ++AE RK+K   +++++ +  G +     I G NAY  LK E GVHR+ 
Sbjct: 126 LFVADLLKMYLKFAEHRKWKCSIVDMNETDLGGYREVICTIDGHNAYSILKFESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S+ R HTS  ++ V P   + ++IEIS+ D R+D YRASGAGGQH+N T SA+R
Sbjct: 186 RIPETESSGRVHTSAVTVAVLP-EAEDVDIEISKEDIRVDVYRASGAGGQHINKTSSAIR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ ER Q +N+ +A  +L+A+LY+  L+K    +   ++ K ++G G  
Sbjct: 245 ITHLPTGIVVTCQNERDQRQNREKAMQILKARLYDEALRK--TKSETAQNRKEQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +IR+Y   P   + D R  +        ++G ++  +   +   
Sbjct: 303 SERIRTYNY-PQGRITDHRIGVSVYQMDSFMNGYMEPIIDRLIEAD 347


>gi|295688344|ref|YP_003592037.1| peptide chain release factor 1 [Caulobacter segnis ATCC 21756]
 gi|295430247|gb|ADG09419.1| peptide chain release factor 1 [Caulobacter segnis ATCC 21756]
          Length = 356

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 114/345 (33%), Positives = 179/345 (51%), Gaps = 13/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   +  +        +  E   L +E   L      ++ +     +   L  +
Sbjct: 8   LDQVLDRFREVEARMGAAT---DGTEIVKLSKEHAELKPVAEAVERLAKLSAERAELDVM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           A + +   ++++    L                   + ++  A LEV AG GG E+  +A
Sbjct: 65  AADPEMADMVRDEMAELDEKLPVLERDLALMLAPKDKDENASAILEVRAGTGGDEAALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+A+   ++ E   I +GE  G K     I G   +G LK E GVHR+ R+ 
Sbjct: 125 GDLFRMYQRYAQLHGWRVEIDSISEGEMGGYKEIVASITGDGVFGRLKFESGVHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P   + +EI+I ESD RIDTYR+SGAGGQHVN TDSAVRITH
Sbjct: 185 ATEAQGRIHTSAATVAVLP-EAEDVEIDIKESDLRIDTYRSSGAGGQHVNKTDSAVRITH 243

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTGVVV    E+SQH+N+A+A   L+A+LY+++ +  +  +   E+ K+++G G    +
Sbjct: 244 LPTGVVVTSS-EKSQHQNRARAMKNLKARLYDMQREALD--SARSEARKSQVGSGDRSER 300

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           IR+Y   P   V D R N+   + S +++GD LDD +   +A  +
Sbjct: 301 IRTYNF-PQGRVTDHRINLTLYNLSRIMEGDALDDVINPLIAEDQ 344


>gi|296158326|ref|ZP_06841157.1| peptide chain release factor 2 [Burkholderia sp. Ch1-1]
 gi|295891270|gb|EFG71057.1| peptide chain release factor 2 [Burkholderia sp. Ch1-1]
          Length = 280

 Score =  212 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 153/266 (57%), Positives = 204/266 (76%), Gaps = 1/266 (0%)

Query: 88  TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
              + Q I+  V   +F  + S  AD N+A+L++ AGAGGTE+ DWA MLLR Y R+ E+
Sbjct: 14  CESDAQGIEQRVADMEFRRMFSNPADPNNAFLDIQAGAGGTEACDWAAMLLRQYLRYCER 73

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           + FKTE LE  DG+ AGIK+AT+ I+G  AYG+L+ E GVHRLVR SP+DS+  RHTSFS
Sbjct: 74  KGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHRLVRKSPFDSSGGRHTSFS 133

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           S++VYP +DDSIE++I+ +D RIDTYRASGAGGQH+N TDSAVRITH+P+G+VVQCQ +R
Sbjct: 134 SVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTDSAVRITHMPSGIVVQCQNDR 193

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQH+N+A+A  ML+++LYE E++KR+E  +  E+ KT++GWG QIRSYVL     +KDLR
Sbjct: 194 SQHRNRAEAMAMLKSRLYEAEIRKRQEEQDKLEAGKTDVGWGHQIRSYVLD-NSRIKDLR 252

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAI 353
           TN+E ++   VLDGDLD F+ A+L  
Sbjct: 253 TNVEISNTKSVLDGDLDPFISASLKQ 278


>gi|188580162|ref|YP_001923607.1| peptide chain release factor 1 [Methylobacterium populi BJ001]
 gi|226739114|sp|B1Z914|RF1_METPB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|179343660|gb|ACB79072.1| peptide chain release factor 1 [Methylobacterium populi BJ001]
          Length = 361

 Score =  212 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 111/349 (31%), Positives = 177/349 (50%), Gaps = 15/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R  F+  +  D     +      L RE   LD  ++ I+  +    +   +  L
Sbjct: 9   LDAILARHEFVTAQLADGS--ADAESIVQLSRELSELDGVVAAIRHYRAAEANLAGIRAL 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130
             E      ++  +   +    E   +     Q   L    AD   A LE+ AG GG E+
Sbjct: 67  IDEPGGDPEMRALAAEEKPEAEEALEQAHRALQLMLLPKDAADEKSAILEIRAGTGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY ++AE + ++ E +   +G   G +     +KG + +  LK E G HR+
Sbjct: 127 ALFAGDLFRMYAKYAESKGWRVEVISESEGTVGGYREVVAEVKGRSVFSRLKFESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++I I+E+D +IDT RA GAGGQHVN T+SA+
Sbjct: 187 QRVPDTETQGRIHTSAATVAVLP-EAEEVDIAINEADLKIDTMRAQGAGGQHVNKTESAI 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTGVVV  Q+ERSQHKN+A+A  +LR+KL++ E   ++  +      K ++G G 
Sbjct: 246 RITHMPTGVVVFVQEERSQHKNRARAMALLRSKLFDAERTAKD--SARAADRKAQVGSGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+      +V+ G  LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQGRVTDHRINLTLYKLEEVMAGPALDEVIDALVTEHQ 351


>gi|323345650|ref|ZP_08085873.1| peptide chain release factor RF1 [Prevotella oralis ATCC 33269]
 gi|323093764|gb|EFZ36342.1| peptide chain release factor RF1 [Prevotella oralis ATCC 33269]
          Length = 370

 Score =  212 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 91/364 (25%), Positives = 155/364 (42%), Gaps = 20/364 (5%)

Query: 7   LNCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           +     + +  D    R   ++T   DP +  +      L +E + L + +   +     
Sbjct: 1   MAENNSILEKLDGLESRYEEVSTLITDPDVINDQQRYVKLTKEYKDLGDIMEARRRYIAC 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEV 121
           L       EL   E D  + +   + L   +      + E           D  +  +E+
Sbjct: 61  LNAIQEAKELLANESDADMKEMAREELATNEALQPKLEEEIKLALVPKDPEDEKNVQMEI 120

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG GG E+  +A  L  MY ++ + + +        +G   G K     + G N YG L
Sbjct: 121 RAGTGGDEAALFAGDLFNMYKKYCDSKGWTLSVTSESEGAVGGFKEIDFAVSGANVYGTL 180

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   ++  R HTS +++ V P  D      I+E D + DT+R+SGAGGQ
Sbjct: 181 KYESGVHRVQRVPATETQGRMHTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQ 239

Query: 242 HVNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  +S VR+ +            ++++C + R Q KNK +A + LR  +Y+ E QK  
Sbjct: 240 NVNKVESGVRLRYPWRNPNTGETEEILIECTETRDQPKNKERALSRLRTFIYDREHQKY- 298

Query: 294 EIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            + +I    K+ +  G +   IR+Y   P   V D R           L G++ + + A 
Sbjct: 299 -VDDIANRRKSLVSTGDRSAKIRTYNF-PQGRVTDHRIGFTTHDLQGFLGGNIQEMIDAL 356

Query: 351 LAIK 354
              +
Sbjct: 357 TVAE 360


>gi|86140561|ref|ZP_01059120.1| peptide chain release factor 1 [Leeuwenhoekiella blandensis MED217]
 gi|85832503|gb|EAQ50952.1| peptide chain release factor 1 [Leeuwenhoekiella blandensis MED217]
          Length = 360

 Score =  212 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 100/342 (29%), Positives = 170/342 (49%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QR   ++     P +  +      L +E + L   +   +             E+
Sbjct: 7   LNFIKQRFDEVSDLIIQPDIISDQKRYVELNKEYKDLRALMDERENYIKHTQRIEEAEEI 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +     L+  K  +   +    F  +     D+ +A +E+ AG GG E+ 
Sbjct: 67  IADGSDPEMTEMAKLQLEEAKEAMPALEEKIRFMLVPKDPEDAKNAVMEIRAGTGGDEAS 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + ++T  ++  +G   G K   + + G + YG L+ E GVHR+ 
Sbjct: 127 IFAGDLYRMYMKYCESKGWRTSTIDYSEGTSGGYKEIQVEVTGEDVYGTLRFEAGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V+P  ++     I   D RID + +SG GGQ VNTT SAVR
Sbjct: 187 RVPQTETQGRVHTSAATVMVFPEAEEFDVE-IDPKDVRIDYFCSSGPGGQSVNTTYSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +TH PTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL K++E         + +  G +
Sbjct: 246 LTHEPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDLELAKKQEEDAAKRG--SMVTSGDR 303

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              IR+Y   P   V D R N+     ++++DGD+   +   
Sbjct: 304 SAKIRTYNY-PQGRVTDHRINLTLYDLANIIDGDIQKIIDEL 344


>gi|162457313|ref|YP_001619680.1| peptide chain release factor RF-1 [Sorangium cellulosum 'So ce 56']
 gi|229470353|sp|A9G9L1|RF1_SORC5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|161167895|emb|CAN99200.1| peptide chain release factor RF-1 [Sorangium cellulosum 'So ce 56']
          Length = 364

 Score =  212 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 99/346 (28%), Positives = 169/346 (48%), Gaps = 12/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLIL 72
            +   +R   L      P +     E + L RER  ++  +      ++++ R+ ++   
Sbjct: 7   LEAVQRRFQELEHLMCSPAVLAAPAELQRLNRERTEIEPVVVAFARMRDVERRIAEDREA 66

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L      +         +  +             L     D+ +  +E+ +G GG E+  
Sbjct: 67  LSDPDLSELAQAELPELELERERLAAELEV--LLLPKDPNDTRNTVIEIRSGEGGEEAAL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RM  R+AE +++K E L + +    G K    LI G + Y  L+ E GVHR+ R
Sbjct: 125 FAADLFRMLCRYAETKRWKVEVLNLSEASAGGYKEVAALITGQDVYSHLRYEGGVHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P   D +++ I E D  I    + G GGQ VNTT+SAV+I
Sbjct: 185 VPSTETQGRIHTSTATVAVLP-EADEVDVHIDEKDLEISIAASGGPGGQGVNTTNSAVQI 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311
            H+PTG++V+CQ ERSQ KNKA+A  +LR++L  LEL++R +        +T +G G + 
Sbjct: 244 KHLPTGMIVKCQDERSQLKNKAKAMKVLRSRL--LELEQRRQEEAQSAERRTMVGTGERA 301

Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +R+Y   P   V D R  +       +++GDL++ + A    ++
Sbjct: 302 QKVRTYNF-PQNRVTDHRIGLTLHKLDKIIEGDLEELIGALRTHRQ 346


>gi|255323257|ref|ZP_05364392.1| peptide chain release factor 1 [Campylobacter showae RM3277]
 gi|255299780|gb|EET79062.1| peptide chain release factor 1 [Campylobacter showae RM3277]
          Length = 355

 Score =  212 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 118/340 (34%), Positives = 177/340 (52%), Gaps = 9/340 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
            R   L+    DP +  ++     L +E+ +L++  S  K     L D      L  + +
Sbjct: 11  DRYDELSRLLSDPSITNDIANMTKLSKEQSNLEDIASAAKSYLQTLADIEENKALLDDAE 70

Query: 81  DCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
              + ++   NL+  K    E  +   L     D  + +LE+ AG GG E+  +A  L  
Sbjct: 71  LGELAKDELKNLESQKENLEEEIKILLLPKDPNDDKNVFLEIRAGTGGDEAALFAGDLFN 130

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
            YTR+AE R +K E +   +G   G K   LLIKG  AY  LK E G HR+ R+   +S 
Sbjct: 131 AYTRYAELRGYKFEIVSQSEGNTGGFKEIILLIKGKGAYSRLKFEGGTHRVQRVPETESQ 190

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ + P V+DS    I+ +D RID  R+SG GGQ VNTTDSAVRITHIPTG+
Sbjct: 191 GRVHTSAVTVAIMPEVEDSEIE-INPNDLRIDVMRSSGHGGQSVNTTDSAVRITHIPTGI 249

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYV 316
           VV  Q  +SQHKNK  A  +L+A+LYE++ ++R  +A      K+++G G    +IR+Y 
Sbjct: 250 VVTNQDGKSQHKNKEAAMKVLKARLYEIQEEER--LAKETSERKSQVGTGDRSGRIRTYN 307

Query: 317 LQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
             P   + D R N+       ++  G  D+ ++  +A  +
Sbjct: 308 F-PQNRISDHRINLTLYRLDAIMAAGLFDEIIEPLIAHYQ 346


>gi|241895238|ref|ZP_04782534.1| peptide chain release factor 1 [Weissella paramesenteroides ATCC
           33313]
 gi|241871544|gb|EER75295.1| peptide chain release factor 1 [Weissella paramesenteroides ATCC
           33313]
          Length = 361

 Score =  212 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 108/352 (30%), Positives = 174/352 (49%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+   + V R   ++    DP +  +      L +E   L   +   K  +  +     
Sbjct: 4   IFEKVQSVVDRYEEVSEMISDPEVIADTKRFLALSKEEGSLRETVETFKHYKQVVVGIEE 63

Query: 72  LLEL-----ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
             E+        E +    +E  D     +   +  +   L     D  +  +E+H  AG
Sbjct: 64  NEEILREEANDSELEELAKEELKDLRVEKEALEDQIKILLLPKDPNDDKNIIMEIHGAAG 123

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E   +A  L  MY R+AEK+ ++ E ++ +  E  G K   L+I G N Y  LK E G
Sbjct: 124 GDEGALFAADLYDMYVRYAEKQGWQVEIIDENKTEIGGYKEIVLMITGNNVYSKLKFENG 183

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P   + ++IEI++ D R+D YR+SGAGGQH+N T
Sbjct: 184 AHRVQRVPETESAGRVHTSTATVGVMP-EYEDVDIEIADKDLRVDVYRSSGAGGQHINKT 242

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+TH+PTG+VV  Q +RSQ +N+A+A  +L+A++Y+    + E      E  KT +
Sbjct: 243 SSAVRMTHLPTGIVVAMQDQRSQQQNRAKAMEILKARVYDYYASQNEAE--YAEQRKTAV 300

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       +++G+L D + A L   +
Sbjct: 301 GTGDRSERIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELSDVIDALLIADQ 351


>gi|238650499|ref|YP_002916351.1| peptide chain release factor 2 [Rickettsia peacockii str. Rustic]
 gi|238624597|gb|ACR47303.1| peptide chain release factor 2 [Rickettsia peacockii str. Rustic]
          Length = 285

 Score =  212 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 167/279 (59%), Positives = 212/279 (75%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A  E+D   L +   +L+ + +     + E L SGEAD N+ +LE++AGAGGTES DWA
Sbjct: 1   MAEAENDLETLSQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEINAGAGGTESHDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           ++++RMY R+AE+  FKTE + + +GEEAGIKS T+ I G  AYGW K E GVHRLVRIS
Sbjct: 61  SIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTEAGVHRLVRIS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+++  +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQHVNTTDSAVRITH
Sbjct: 121 PFNAAGKRMTSFASSWVYPEIDDNIAIIIEDKDLRIDTFRASGAGGQHVNTTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           IPTG+V QCQ +RSQHKNKAQA  ML+AKLYELE+QKR +  N   ++KT+  WG QIRS
Sbjct: 181 IPTGMVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWGHQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           YVLQPYQMVKDLRT+ E +    VLDGDL++F+ A LA+
Sbjct: 241 YVLQPYQMVKDLRTDYETSDTKGVLDGDLEEFVSANLAM 279


>gi|118588514|ref|ZP_01545923.1| peptide chain release factor 1 [Stappia aggregata IAM 12614]
 gi|118439220|gb|EAV45852.1| peptide chain release factor 1 [Stappia aggregata IAM 12614]
          Length = 357

 Score =  212 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 125/346 (36%), Positives = 184/346 (53%), Gaps = 18/346 (5%)

Query: 16  WDNAVQRLSFLNTKTE-DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
            D  + R + L      +P    +      L RE   L+  +  I+ +     D      
Sbjct: 7   LDTLLDRFAELEHMMSANP----DPGAYVKLSREYAGLEPLVGKIRALIKAEQDLAGAKA 62

Query: 75  LALEEDDCSIL-----QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           L  +    + +      E  +  +R++   +  +   L   EADSNDA LEV AG GG E
Sbjct: 63  LLQDPSSDAEMRELAEMERDELEERVEELAQDVRIGLLPKDEADSNDAILEVRAGTGGDE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY R+AE + +K E L   +GE  G K     + G N +  LK E GVHR
Sbjct: 123 AALFAGDLFRMYQRYAELQGWKVEILSASEGEVGGYKEVIASVSGENVFAKLKFESGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P   + ++I++ ESD RIDTYRASGAGGQHVNTTDSA
Sbjct: 183 VQRVPATESGGRIHTSAATVAVLP-QAEDVDIDVQESDLRIDTYRASGAGGQHVNTTDSA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV  Q ERSQHKNKA+A  +LRA++Y+ E ++    +   E+ + ++G G
Sbjct: 242 VRITHLPTGIVVAVQDERSQHKNKARAMQLLRARIYDEERER--AASERTEARRLQVGSG 299

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
               +IR+Y   P   V D R  +       +L G+ L + ++  +
Sbjct: 300 DRSERIRTYNY-PQGRVTDHRIGLTLYKLEQILSGEALGEVIEPLI 344


>gi|302558381|ref|ZP_07310723.1| peptide chain release factor 1 [Streptomyces griseoflavus Tu4000]
 gi|302475999|gb|EFL39092.1| peptide chain release factor 1 [Streptomyces griseoflavus Tu4000]
          Length = 358

 Score =  212 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 117/350 (33%), Positives = 175/350 (50%), Gaps = 16/350 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +  V   + L  K  DP +  +   A+ L +    L   ++  +  +    D   
Sbjct: 1   MFEAVEELVAEHADLEKKLADPSVHSDQANARRLNKRYAELTPIVATYRSWKQTGDDIET 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EL    DD     E  D  ++ +   E  +   +    +D  D  LE+ AGAGG ES 
Sbjct: 61  AREL--AADDPDFAAEVKDLEKQREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI----------KGPNAYGWL 181
            +A  LLRMY R+AE+  +KTE ++  + E  G K   + +           G   +  L
Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVAVKTKGGQGATEPGQGVWARL 178

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   +S  R HTS + + V P   + +++EI+ +D RID YR+SG GGQ
Sbjct: 179 KYEGGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEVDVEINPNDLRIDVYRSSGPGGQ 237

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR++L     ++ E  A     
Sbjct: 238 SVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREAADARR 297

Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           S+   +    +IR+Y   P   + D R   +  +   VLDGDL   ++A 
Sbjct: 298 SQVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLAAVIQAC 346


>gi|226945982|ref|YP_002801055.1| peptide chain release factor 2 [Azotobacter vinelandii DJ]
 gi|226720909|gb|ACO80080.1| peptide chain release factor 2 [Azotobacter vinelandii DJ]
          Length = 280

 Score =  212 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 157/253 (62%), Positives = 198/253 (78%), Gaps = 1/253 (0%)

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
           E  +F  + SGE D+ +AYL+V AG+GGTE+QDWANMLLRMY RWA+K  F TE +E+ +
Sbjct: 26  EKLEFRRMFSGEMDARNAYLDVQAGSGGTEAQDWANMLLRMYLRWADKHGFDTEIVELSE 85

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
           GE AGIKSAT+ ++G  A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++  P VDD+I
Sbjct: 86  GEVAGIKSATVHVRGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFSAVFASPEVDDNI 145

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           EI+I+ +D R+DTYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH N+ +A  M
Sbjct: 146 EIDINPADLRVDTYRSSGAGGQHVNTTDSAVRITHLPTNTVVSCQNERSQHANRDRAMKM 205

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           LRAKLYELE+ KR   A   E +K++IGWG QIRSYVL     +KDLRT IE ++   VL
Sbjct: 206 LRAKLYELEVMKRNVAAQALEDTKSDIGWGHQIRSYVLD-QSRIKDLRTGIENSNCDAVL 264

Query: 340 DGDLDDFMKATLA 352
           DGDLD+F++A+L 
Sbjct: 265 DGDLDEFIEASLK 277


>gi|328954736|ref|YP_004372069.1| bacterial peptide chain release factor 1 (bRF-1) [Coriobacterium
           glomerans PW2]
 gi|328455060|gb|AEB06254.1| bacterial peptide chain release factor 1 (bRF-1) [Coriobacterium
           glomerans PW2]
          Length = 355

 Score =  212 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 115/352 (32%), Positives = 172/352 (48%), Gaps = 14/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D     ++    L  K  DP +  +  E   L +E  +  + ++  +       D   
Sbjct: 1   MLDKLKKLIKAYEDLEKKLSDPAVMGDQKEYTRLAKEHANQADLVAMARAYVTAYDDIEA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
             E+  EE D         ++   + ++   + E           D  +  +E+ + AGG
Sbjct: 61  AKEMLHEETDAQSKAMLLADISENEAKIPGLENEIKVMLIPGDPNDEKNTIMEIRSAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L +MY R+ E  ++K E L     E  G KS    + G   Y  +K E GV
Sbjct: 121 DEAAIFAGDLFKMYERFFEAHRWKMELLSASPSEAGGFKSIEFKVSGDKVYSLMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R  TS +++ V P   D I+I+I + D RIDTY ASG GGQ VNTT 
Sbjct: 181 HRVQRIPKTESQGRIQTSTATVAVLP-EADEIDIKIDQGDLRIDTYCASGPGGQCVNTTY 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PT  VVQ Q++RSQ +N+     MLRA+LYE EL++++    +G   +++IG
Sbjct: 240 SAVRITHLPTNTVVQSQEQRSQIQNREVCMQMLRARLYERELEQQQAE--LGAERQSQIG 297

Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
            G +   IR+Y  QP   V D R     T  + VL GD L   + A  A  +
Sbjct: 298 RGNRSEKIRTYN-QPQDRVTDHRIGFSSTY-NGVLLGDQLATVINALSAADR 347


>gi|305667119|ref|YP_003863406.1| peptide chain release factor 2 [Maribacter sp. HTCC2170]
 gi|88708053|gb|EAR00291.1| peptide chain release factor 2 [Maribacter sp. HTCC2170]
          Length = 313

 Score =  212 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 142/308 (46%), Positives = 208/308 (67%), Gaps = 2/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+  Q   + +      Q  + D  +L+E   E +       +  +     +  E  +F+
Sbjct: 1   MKFIQSKKHWVDDFNAAQTLVGDLEVLMEFLKEGEVSENEVNSQYSKATGLI--EKLEFK 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LS E D   A L++ AGAGGTES DWA ML+RMY  W++K  FK + L   +G+ AGI
Sbjct: 59  NMLSEEGDELTAVLQITAGAGGTESCDWAAMLMRMYMMWSQKNGFKVKELNYQEGDVAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ TL ++G  A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDDSIEI+++ 
Sbjct: 119 KTVTLEVEGEFAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDSIEIDVNP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D  I T R+SGAGGQ+VN  ++ V++ H P+G+ +QC   RSQH N+A A  ML+++LY
Sbjct: 179 ADIEITTARSSGAGGQNVNKVETKVQLVHKPSGIQIQCSDSRSQHDNRATAMKMLKSQLY 238

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+K+ E     ESSK +I WG QIR+YV+ PY++VKD+RT+ E  +   V+DG++D 
Sbjct: 239 EIELRKKMEAREEIESSKMKIEWGSQIRNYVMHPYKLVKDVRTSEETGNVDAVMDGNIDQ 298

Query: 346 FMKATLAI 353
           F+KA L +
Sbjct: 299 FLKAFLMM 306


>gi|269926759|ref|YP_003323382.1| peptide chain release factor 1 [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269790419|gb|ACZ42560.1| peptide chain release factor 1 [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 355

 Score =  212 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 123/346 (35%), Positives = 186/346 (53%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
            DN  +R   L+    DP ++ +      + RER  L++ +S  +E +       ++  L
Sbjct: 5   LDNIEKRFDELDRMMSDPEIFSDPSRLMEVARERSELEDIVSLYREYKKVKLTREEDRRL 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +E    +      +E      R K   E  +   L     D  D  +E+ AG GG E+  
Sbjct: 65  MEDPDPDIRQMAEEEYEQLADREKDLEERLKIALLPKDPNDEKDVIVEIRAGTGGEEAAL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMYTR+AE++ +KTE L   + +  G K     +KG  AY  LK E GVHR+ R
Sbjct: 125 FAADLYRMYTRYAERQGWKTEVLSTSESDAGGFKEIIFEVKGRGAYSRLKYESGVHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P   + +E+EI   D RID +R++G GGQ VNTTDSAVRI
Sbjct: 185 VPVTESQGRIHTSTATVAVLP-EAEEVEVEIDPEDLRIDVFRSTGHGGQSVNTTDSAVRI 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311
           TH+PTG+VV CQ E+SQ KN+A+A  +LRA+LYE+E +KREE        ++ +G G + 
Sbjct: 244 THLPTGLVVTCQDEKSQLKNRAKAMAVLRARLYEMERRKREEELGQV--RRSMVGTGERS 301

Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             IR+Y   P   V D R     ++   +LDG++D  +++     +
Sbjct: 302 EKIRTYNF-PQDRVTDHRIKESFSNLPAILDGEIDRIIESLQVADR 346


>gi|156973278|ref|YP_001444185.1| hypothetical protein VIBHAR_00959 [Vibrio harveyi ATCC BAA-1116]
 gi|156524872|gb|ABU69958.1| hypothetical protein VIBHAR_00959 [Vibrio harveyi ATCC BAA-1116]
          Length = 260

 Score =  212 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 152/258 (58%), Positives = 197/258 (76%), Gaps = 1/258 (0%)

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++ ++E  +F  + SG+ DS+D Y+++ AG+GGTE+QDW NM+LRMY RWAE + FK+E 
Sbjct: 1   MEEKLEQLEFRRMFSGDHDSSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKSEV 60

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E+ +GE AG+K AT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP 
Sbjct: 61  IEVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPE 120

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +D++I+I+I+ SD RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK 
Sbjct: 121 IDENIDIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKD 180

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           QA   LRAKL+ELELQK+       E +K++IGWG QIRSYVL     +KDLRT +E  +
Sbjct: 181 QAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRN 239

Query: 335 PSDVLDGDLDDFMKATLA 352
              VLDGDLD F+ A+L 
Sbjct: 240 TQAVLDGDLDKFIGASLK 257


>gi|160891026|ref|ZP_02072029.1| hypothetical protein BACUNI_03473 [Bacteroides uniformis ATCC 8492]
 gi|270294364|ref|ZP_06200566.1| peptide chain release factor 1 [Bacteroides sp. D20]
 gi|317480970|ref|ZP_07940050.1| peptide chain release factor 1 [Bacteroides sp. 4_1_36]
 gi|156859247|gb|EDO52678.1| hypothetical protein BACUNI_03473 [Bacteroides uniformis ATCC 8492]
 gi|270275831|gb|EFA21691.1| peptide chain release factor 1 [Bacteroides sp. D20]
 gi|316902863|gb|EFV24737.1| peptide chain release factor 1 [Bacteroides sp. 4_1_36]
          Length = 370

 Score =  212 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 97/354 (27%), Positives = 166/354 (46%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   ++T   DP +  +      L +E + L + ++  KE    L       E+
Sbjct: 11  LEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMNARKEYMQVLGGIEEAKEI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L   +      +       + +   D  +A LE+  G GG E+ 
Sbjct: 71  IANETDQEMREMAREELDACQTRQPELEEQIKLLLVPADPQDGRNAILEIRGGTGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYT++ E + ++ E    ++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 IFAGDLFRMYTKYCESKGWRMEISSANEGAAGGFKEIVCSVTGDNVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P  ++   + I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +            ++++C + R Q KNK +A + LR  +Y+ E QK   I +I    K
Sbjct: 250 LRYNWKNPNTGIVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRK 307

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T +  G +   IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360


>gi|58038522|ref|YP_190486.1| peptide chain release factor 1 [Gluconobacter oxydans 621H]
 gi|81557234|sp|Q5FUR9|RF1_GLUOX RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|58000936|gb|AAW59830.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Gluconobacter
           oxydans 621H]
          Length = 353

 Score =  212 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 108/348 (31%), Positives = 172/348 (49%), Gaps = 12/348 (3%)

Query: 14  FD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           FD   +  V R   +        L     +   L +E   L+  ++ I+  +        
Sbjct: 3   FDDRLERIVARSEEVQALMSSGELTG--EDFTRLSQEYAELEPVVASIQAWKSAEEQKAG 60

Query: 72  LLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
              L  + +   + Q     ++          +   L    AD   A LE+   AGG E+
Sbjct: 61  AQALLDDPEMRELAQMELAEIEATLPDLQHALRLALLPKDAADERSAILEIRPAAGGDEA 120

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L   Y R++E+  ++ E +E  + E AG+K     I G + +  LK E GVHR+
Sbjct: 121 GLFAAELFDAYRRFSEQNGWRFEVMEYAENEVAGLKEGMATISGRSVFARLKYESGVHRV 180

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ V P   + +++ +++ D RID YRASGAGGQHVN T+SAV
Sbjct: 181 QRVPATESQGRIHTSTVTVAVLP-EAEEVDVTVNDDDLRIDVYRASGAGGQHVNKTESAV 239

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+TH+P+G+VV  Q+E+SQHKNKA+A  +LRA+LYE E  +    A      K+++G G 
Sbjct: 240 RVTHMPSGIVVAMQEEKSQHKNKAKAMKILRARLYERERAQL--HATRAADRKSQVGTGD 297

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       ++ G+ D+ + A    ++
Sbjct: 298 RSERIRTYNF-PQGRVTDHRINLTLYKIDRIMGGEFDEIIDALTREEQ 344


>gi|289626068|ref|ZP_06459022.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289646233|ref|ZP_06477576.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. aesculi str. 2250]
          Length = 293

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 164/290 (56%), Positives = 215/290 (74%), Gaps = 1/290 (0%)

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D   LL ++ EE+D + + + +  ++R++  +E  +F  + SGE D N+AYL++ A
Sbjct: 3   SGLADAKDLLLMSAEEEDQAAVDDVATEVERLRESLEKLEFRRMFSGEMDPNNAYLDIQA 62

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK AT+ IKG  A+GWL+ 
Sbjct: 63  GSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRT 122

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ SD RIDTYR+SGAGGQHV
Sbjct: 123 EIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRSSGAGGQHV 182

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRA+LYE E+QKR   +   E +K
Sbjct: 183 NTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTK 242

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           ++IGWG QIRSYVL     +KDLRTNIE++    VLDGD+D+++ A+L  
Sbjct: 243 SDIGWGHQIRSYVLD-ASRIKDLRTNIERSDCDKVLDGDIDEYLIASLKQ 291


>gi|239617233|ref|YP_002940555.1| peptide chain release factor 1 [Kosmotoga olearia TBF 19.5.1]
 gi|239506064|gb|ACR79551.1| peptide chain release factor 1 [Kosmotoga olearia TBF 19.5.1]
          Length = 361

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 179/344 (52%), Gaps = 9/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   ++L  +  K  D  +  N  +   L +    L         +  +  +     E+
Sbjct: 7   IELFKKQLEEVEAKLSDSSIVGNPSKLMELSKRHAELKEISRSYDLLASKKQELQEWEEI 66

Query: 76  A--LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
              L  ++    ++    LQ+   ++E      L+  E    D  +E+ AG GG E+  +
Sbjct: 67  KELLSPEEREEAEKNIAELQKEIEQIELNLKFLLIPDELGGKDIIVEIRAGTGGEEAALF 126

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMYTR+AE+  +K E LE ++ +  G K  T  IKG + +  LK E GVHR+ R+
Sbjct: 127 AGDLFRMYTRYAERNSWKVETLESNETDLGGFKEVTFQIKGKDVFRKLKYESGVHRVQRV 186

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS +++ V P     +++ I  S+ RIDT+R+SGAGGQHVN T+SAVRI 
Sbjct: 187 PQTESGGRIHTSTATVAVLP-KASEVDVAIDPSELRIDTFRSSGAGGQHVNRTESAVRIV 245

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ-- 311
           H+PTG+ V  Q ERSQH+NKA+A  +LRA+LY L   ++E  + + +  +++IG G +  
Sbjct: 246 HLPTGITVTVQSERSQHQNKARAMEILRARLYSLYRSQQE--STLSQQRRSQIGTGERSE 303

Query: 312 -IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            IR+Y   P   V D R N       D+LDGDLD+ +       
Sbjct: 304 KIRTYNF-PQNRVTDHRINYTTYRLQDILDGDLDELIAKLAEAD 346


>gi|262395207|ref|YP_003287061.1| peptide chain release factor 2 [Vibrio sp. Ex25]
 gi|262338801|gb|ACY52596.1| peptide chain release factor 2 [Vibrio sp. Ex25]
          Length = 260

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 155/258 (60%), Positives = 198/258 (76%), Gaps = 1/258 (0%)

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++ ++E  +F  + SG+ DS+D Y+++ AG+GGTE+QDW NMLLRMY RWAE + FK E 
Sbjct: 1   MEEKLEKLEFRRMFSGDHDSSDCYIDLQAGSGGTEAQDWTNMLLRMYLRWAEAKGFKAEV 60

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E+ +GE AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP 
Sbjct: 61  IEVSEGEVAGLKSATVRISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPE 120

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +D++I+I+I+ SD RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK 
Sbjct: 121 IDENIDIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKD 180

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           QA   LRAKL+ELELQK+       E +K++IGWG QIRSYVL     +KDLRT IE  +
Sbjct: 181 QAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGIENRN 239

Query: 335 PSDVLDGDLDDFMKATLA 352
              VLDGDLD F++A+L 
Sbjct: 240 TQAVLDGDLDKFIEASLK 257


>gi|298488301|ref|ZP_07006333.1| Peptide chain release factor 2 [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298157123|gb|EFH98211.1| Peptide chain release factor 2 [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 293

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 164/290 (56%), Positives = 215/290 (74%), Gaps = 1/290 (0%)

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D   LL ++ EE+D + + + +  ++R++  +E  +F  + SGE D N+AYL++ A
Sbjct: 3   SGLADAKDLLLMSAEEEDQAAVDDVAAEVERLRESLEKLEFRRMFSGEMDPNNAYLDIQA 62

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK AT+ IKG  A+GWL+ 
Sbjct: 63  GSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRT 122

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ SD RIDTYR+SGAGGQHV
Sbjct: 123 EIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRSSGAGGQHV 182

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRA+LYE E+QKR   +   E +K
Sbjct: 183 NTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTK 242

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           ++IGWG QIRSYVL     +KDLRTNIE++    VLDGD+D+++ A+L  
Sbjct: 243 SDIGWGHQIRSYVLD-ASRIKDLRTNIERSDCDKVLDGDIDEYLIASLKQ 291


>gi|170694748|ref|ZP_02885899.1| peptide chain release factor 2 [Burkholderia graminis C4D1M]
 gi|170140379|gb|EDT08556.1| peptide chain release factor 2 [Burkholderia graminis C4D1M]
          Length = 280

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 151/266 (56%), Positives = 203/266 (76%), Gaps = 1/266 (0%)

Query: 88  TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
              + Q ++  V   +F  + +  AD N+A+L++ AGAGGTE+ DWA MLLR Y R+ E+
Sbjct: 14  CEADAQALEQRVADMEFRRMFANPADPNNAFLDIQAGAGGTEACDWAAMLLRQYLRYCER 73

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           + FKTE LE  DG+ AGIK+AT+ I+G  AYG+L+ E GVHRLVR SP+DS+  RHTSFS
Sbjct: 74  KGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHRLVRKSPFDSSGGRHTSFS 133

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           S++VYP VDDSIE++I+ +D RIDTYRASGAGGQH+N TDSAVRITH+P+G+VVQCQ +R
Sbjct: 134 SVFVYPEVDDSIEVDINPADLRIDTYRASGAGGQHINKTDSAVRITHMPSGIVVQCQNDR 193

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQH+N+A+A  ML+++LYE E++KR+   +  E+ KT++GWG QIRSYVL     +KDLR
Sbjct: 194 SQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAGKTDVGWGHQIRSYVLD-NSRIKDLR 252

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAI 353
           TN+E ++   VLDGDLD F+ A+L  
Sbjct: 253 TNVEISNTKSVLDGDLDPFISASLKQ 278


>gi|83310717|ref|YP_420981.1| protein chain release factor A [Magnetospirillum magneticum AMB-1]
 gi|119361556|sp|Q2W6V3|RF1_MAGMM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|82945558|dbj|BAE50422.1| Protein chain release factor A [Magnetospirillum magneticum AMB-1]
          Length = 354

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 117/345 (33%), Positives = 186/345 (53%), Gaps = 10/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           +D  + R   +  +        +    + L +E   LD  ++ ++  +    D +   E+
Sbjct: 7   FDKVLYRHDEVRAQLSSGEGM-DSQTIQRLSKELSELDPVVTAVQAFRKAREDMVQAAEM 65

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E    L+          Q   L   EAD  +A +EV AG GG E+  +A
Sbjct: 66  MNDPDMKDLAEEEFYALKERLPALEREVQIMLLPKDEADEKNAIIEVRAGTGGEEAALFA 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+A    ++ E ++++D    G+K A+  I G N +  LK E GVHR+ R+ 
Sbjct: 126 AELFRMYERYAGLHGWRFEVMDVNDTGIGGVKEASATITGRNVFARLKFESGVHRVQRVP 185

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ + P   + ++I++++SD R D YR+ G+GGQ VNTTDSAVR+TH
Sbjct: 186 ATESQGRIHTSAATVAIMP-EAEEVDIQLNDSDLRFDVYRSQGSGGQSVNTTDSAVRVTH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+ V CQQE+SQHKNKA A  +LRA+LY  E ++  + A    + K+++G G    +
Sbjct: 245 IPTGLAVACQQEKSQHKNKATALKLLRARLY--ERERSAKDAERAAARKSQVGSGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           IR+Y   P   V D R N+       V+ GD LD+ ++A +A  +
Sbjct: 303 IRTYNF-PQGRVTDHRINMTLYKIDAVMSGDALDELVEALVAADQ 346


>gi|94676864|ref|YP_588739.1| peptide chain release factor 1 [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|119361509|sp|Q1LTH5|RF1_BAUCH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|94220014|gb|ABF14173.1| peptide chain release factor 1 [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 366

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 106/344 (30%), Positives = 174/344 (50%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +R   + T   +  + ++    ++L +E   L +  +  +  Q    +  I   +
Sbjct: 9   LKVLQERYYEVETLLGNSEVAKDRERLRILSKEYAQLTDIHTCFQHWQQVQENISITGPM 68

Query: 76  ALEEDDCSILQETSDNLQ-----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             + +   ++Q+  + L        +  +     +       D    ++EV AG GG E+
Sbjct: 69  LEDPEMHDMVQDELNKLHSLLSTLEQQLLTLLLQKDSNKDPNDERGCFIEVRAGTGGDEA 128

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY+R+AE   ++ + +    G   G K   + +   NAYG LK E G HR+
Sbjct: 129 ALFAGDLFRMYSRYAEIHSWQIDVISASSGPHGGYKEIIVKMSHDNAYGQLKFESGGHRV 188

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            RI   +S  R HTS  ++ V P +  +   EIS  D R+DT+R+SGAGGQHVNTT+SA+
Sbjct: 189 QRIPETESQGRIHTSSCTVAVIPDILHAELPEISPEDIRVDTFRSSGAGGQHVNTTESAI 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VV+CQ ERSQHKNKA+A  +L A+L   E Q R++  +     +  +G G 
Sbjct: 249 RITHLPTGLVVECQDERSQHKNKAKAMAVLSARLRAAEAQCRQQEESCM--RRNLLGSGY 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D R        ++V++G L+  ++  +
Sbjct: 307 RSDRIRTYNF-PQGRITDHRIGFTTYRLNEVIEGKLEILLQPII 349


>gi|261250316|ref|ZP_05942892.1| peptide chain release factor 2 [Vibrio orientalis CIP 102891]
 gi|260939432|gb|EEX95418.1| peptide chain release factor 2 [Vibrio orientalis CIP 102891]
          Length = 263

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 151/257 (58%), Positives = 198/257 (77%), Gaps = 1/257 (0%)

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           + ++E  +F  + SG+ DS+D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FKTE +
Sbjct: 5   EAKLEKLEFRRMFSGDHDSSDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEVI 64

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E+ +GE AG+K AT+ I G  AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP +
Sbjct: 65  EVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEI 124

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD+I+I+I+ SD RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK Q
Sbjct: 125 DDNIQIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQ 184

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A   LRAKL+ELE+QK+       E +K++IGWG QIRSYVL     +KDLRT +E  + 
Sbjct: 185 AMKQLRAKLFELEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNT 243

Query: 336 SDVLDGDLDDFMKATLA 352
             VLDGDLD F++A+L 
Sbjct: 244 QAVLDGDLDKFIEASLK 260


>gi|283953774|ref|ZP_06371305.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           414]
 gi|283794815|gb|EFC33553.1| peptide chain release factor 1 [Campylobacter jejuni subsp. jejuni
           414]
          Length = 355

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 114/345 (33%), Positives = 180/345 (52%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  ++R   LN+   +  +  ++ +   L +E+++L+  +   KE    L +      L
Sbjct: 6   LDPFLKRFEELNSLLSNSDILSDISKMTTLSKEQKNLEPIVLKAKEYLKTLENIEENKAL 65

Query: 76  ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +      +E     +      E  +   L     D  + +LE+ AG GG E+  + 
Sbjct: 66  LNDPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDEKNIFLEIRAGTGGDEASLFV 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L++ Y R+AE R +K E +   +G   G K   +L+KG  AY  LK E G HR+ R+ 
Sbjct: 126 GDLVKAYARYAENRGYKLEIVSSSEGSMGGFKEIIMLVKGTGAYSRLKYEGGTHRVQRVP 185

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P   D IEIEI+ +D ++D  R+SG GGQ VNTTDSAVRITH
Sbjct: 186 QTESQGRVHTSAITVAVMP-EVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV  Q  +SQHKNK  A  +L+A+LY  E+Q+ E +A   E+ K+++G G    +
Sbjct: 245 IPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQESERLAKESEARKSQVGSGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++ DG  D+ ++  +   +
Sbjct: 303 IRTYNF-PQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQ 346


>gi|213962214|ref|ZP_03390478.1| peptide chain release factor 1 [Capnocytophaga sputigena Capno]
 gi|213955220|gb|EEB66538.1| peptide chain release factor 1 [Capnocytophaga sputigena Capno]
          Length = 357

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 98/350 (28%), Positives = 169/350 (48%), Gaps = 12/350 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  +   QR   ++     P +  +      L +E + L   +   +E  +   +   
Sbjct: 1   MLDKLNIVKQRFDEVSDLIIQPDVIADQKRYIQLNKEYKDLKELMDKREEYINVTGNLAE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAGG 127
             E+  +  D  +++     L   K  +   + E           D+ +A +E+ AG GG
Sbjct: 61  AEEIIADGSDAEMVEMAKLQLDESKERLPQLEEEIKYMLIPKDPEDAKNAVMEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYT++ + + + T  ++ ++G   G K     + G N YG LK E GV
Sbjct: 121 DEASIFAGDLYRMYTKYCQSKGWSTSVMDFNEGTAGGYKEIIFEVTGDNVYGTLKFEAGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P  ++     ++ +D  I    ++G GGQ VNTT 
Sbjct: 181 HRVQRVPQTETQGRVHTSAATVMVLPEAEEFDVE-LNMADVNIIRTTSTGPGGQSVNTTY 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SA+++ HIPTG+ V+CQ E+SQHKN  +A  +LR++LYELEL K+ E        K+ + 
Sbjct: 240 SAIQLQHIPTGIEVRCQDEKSQHKNLEKALKVLRSRLYELELAKKME--ADSARRKSMVS 297

Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            G +   IR+Y   P   V D R  +      +V++GD+   +      +
Sbjct: 298 SGDRSAKIRTYNY-PQGRVTDHRIGLTLYDLQNVINGDVQRLIDELQLAE 346


>gi|167011047|ref|ZP_02275978.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica FSC200]
          Length = 248

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 148/246 (60%), Positives = 188/246 (76%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D+N A+L++ +G+GGTE+QDWA ML+RMY RWA+   FK    ++ DG+ AGIK
Sbjct: 1   MFSGKMDANKAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGFKVTVDDVSDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
             TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S+++ P VDD I+IEI+ +
Sbjct: 61  GCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVFISPEVDDDIDIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQHKN+  A   L++KLYE
Sbjct: 121 DLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQHKNRDNAMKQLKSKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +ELQKR    N  E SK +IGWG QIRSYVL     +KDLRT +E T+   VLDGDLD F
Sbjct: 181 MELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIKDLRTGVENTNTQAVLDGDLDKF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|294631400|ref|ZP_06709960.1| peptide chain release factor 1 [Streptomyces sp. e14]
 gi|292834733|gb|EFF93082.1| peptide chain release factor 1 [Streptomyces sp. e14]
          Length = 355

 Score =  211 bits (538), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 175/347 (50%), Gaps = 13/347 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +  V   + L  K  DP +  +   A+ L +    L   ++  +  +    D   
Sbjct: 1   MFEAVEELVAEHADLEKKLADPSVHADQANARKLNKRYAELTPIVATYRSWKQTGDDIET 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EL    DD     E  +  ++ +   E  +   +    +D  D  LE+ AGAGG ES 
Sbjct: 61  AREL--AADDPDFAAEVKELDKQREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP-------NAYGWLKGE 184
            +A  LLRMY R+AE+  +KTE ++  + E  G K   + +K           +  LK E
Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVAVKARGQIEPGQGVWARLKYE 178

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS + + V P   + +++EI+ +D RID YR+SG GGQ VN
Sbjct: 179 GGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEVDVEINPNDLRIDVYRSSGPGGQSVN 237

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR++L     ++ E  A     S+ 
Sbjct: 238 TTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAEREAADARRSQV 297

Query: 305 E-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +    +IR+Y   P   + D R   +  +   VLDGDL   ++A 
Sbjct: 298 RTVDRSEKIRTYNY-PENRISDHRVGFKAYNLDQVLDGDLAAVIQAC 343


>gi|303283714|ref|XP_003061148.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226457499|gb|EEH54798.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 404

 Score =  211 bits (538), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 93/348 (26%), Positives = 169/348 (48%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +++ Q    L  +  DP +  N  E + L +    L + +      ++ + +      +
Sbjct: 49  LESSTQTHKELTFRLADPDVASNAKEFQKLSKALGELTSVVDQYARYKECIEELQEAKAM 108

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130
             +      + E +        E      ES+          D  +  LE+ AG GG E+
Sbjct: 109 VKDAAGDLEMGEMAREEATALNEEMDALEESMTMALLPRDPLDEKNIVLEIRAGTGGDEA 168

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY+R+A+ + +K   L  +  +  G K   + + G + Y  LK E GVHR+
Sbjct: 169 GIWAGDLWRMYSRYADSKGWKASVLTTNPADSGGYKEIVVELVGDSVYSELKWEAGVHRV 228

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R  TS +++ V P   D +E++I + D  + T R+ GAGGQ+VN  ++AV
Sbjct: 229 QRVPATESQGRIQTSTATVAVMP-EVDEVEVKIDDKDIELTTARSGGAGGQNVNKVETAV 287

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ER+Q KN+ +A  +LR++L+EL+++++ +   +    K ++G G 
Sbjct: 288 DLVHKPTGIRIFCTEERTQLKNRIRAMQILRSRLFELQMEEQAKE--VAGRRKAQVGSGA 345

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R   E       ++GD+   + A  A+++
Sbjct: 346 RSEKIRTYNYKD-NRVSDHRVG-ENFPLEGFMNGDVSPAIGACQAMEQ 391


>gi|227832889|ref|YP_002834596.1| peptide chain release factor RF-1 [Corynebacterium aurimucosum ATCC
           700975]
 gi|262182622|ref|ZP_06042043.1| peptide chain release factor RF-1 [Corynebacterium aurimucosum ATCC
           700975]
 gi|254790875|sp|C3PFQ4|RF1_CORA7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|227453905|gb|ACP32658.1| peptide chain release factor RF-1 [Corynebacterium aurimucosum ATCC
           700975]
          Length = 358

 Score =  211 bits (538), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 112/346 (32%), Positives = 180/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +     +  +  DP +  +  + + L +    L   ++  +E+     D     E+
Sbjct: 8   VDDIISEYQGIEMQMADPEVAGDQSQFRKLSKRYAELRPIVAVNEELVQARQDLADAKEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E+ +     +  + L     E            E DS D  +E+ AGAGG E+  +A 
Sbjct: 68  AYEDHEFQSEVDRLEPLVVQLEEQLADLL--APRDEHDSEDIIMEIKAGAGGEEAALFAG 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190
            L RMY R+A+K  F+ E L +++ +  G+K  ++  K        A+   K E GVHR+
Sbjct: 126 DLARMYERFADKAGFQWEVLGLNESDLGGVKDMSISFKSKTPSRDGAWSVFKFEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R  TS + + VYP  ++   + I + D R+D YR+SG GGQ VNTTDSAV
Sbjct: 186 QRVPVTESQGRIQTSAAGVLVYPEPEEIDSVNIDDKDIRVDVYRSSGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG+VV CQ+ERSQ +NKA+A  +L+A+L ++E + RE  A    +S+   +   
Sbjct: 246 RITHLPTGLVVTCQKERSQIQNKARALQVLQARLDQMEREAREAEAGEQRASQVRTMDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R   +  +   VLDGD+ D ++A  A ++
Sbjct: 306 ERIRTYNW-PENRITDHRIGYKANNLDSVLDGDMQDLIEALQAQER 350


>gi|254850994|ref|ZP_05240344.1| peptide chain release factor 2 [Vibrio cholerae MO10]
 gi|258620333|ref|ZP_05715371.1| peptide chain release factor 2 [Vibrio mimicus VM573]
 gi|258624704|ref|ZP_05719638.1| peptide chain release factor 2 [Vibrio mimicus VM603]
 gi|254846699|gb|EET25113.1| peptide chain release factor 2 [Vibrio cholerae MO10]
 gi|258582991|gb|EEW07806.1| peptide chain release factor 2 [Vibrio mimicus VM603]
 gi|258587212|gb|EEW11923.1| peptide chain release factor 2 [Vibrio mimicus VM573]
          Length = 248

 Score =  211 bits (538), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 153/246 (62%), Positives = 192/246 (78%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ DS+D YL++ AG+GGTE+QDW +MLLRMY RWA+ + FKTE +E+ +G+ AG+K
Sbjct: 1   MFSGDHDSSDCYLDLQAGSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSEGDVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP VD++I+IEI+ +
Sbjct: 61  SATVRIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENIDIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+E
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LELQK+       E +K++IGWG QIRSYVL     +KDLRT IE  +   VLDGDLD F
Sbjct: 181 LELQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDKF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|41408560|ref|NP_961396.1| peptide chain release factor 1 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|254774338|ref|ZP_05215854.1| peptide chain release factor 1 [Mycobacterium avium subsp. avium
           ATCC 25291]
 gi|61214644|sp|Q73X48|RF1_MYCPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|41396918|gb|AAS04779.1| PrfA [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 357

 Score =  211 bits (538), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 112/332 (33%), Positives = 165/332 (49%), Gaps = 9/332 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L  +  DP L  N  EA+   R    L   +   +++     D     EL
Sbjct: 8   IDVLLAEHADLERRLSDPDLHSNPDEARKAGRRFARLAPIVGTYRKLMAAREDLETAREL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A ++D  +      ++                     D++D  LEV +G GG ES  +A 
Sbjct: 68  AADDDSFTAEVADLESRVAQLDTQLTDML--APRDPHDADDIVLEVKSGEGGEESALFAA 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190
            L RMY R+AE+  +    L+    +  G K ATL I+         +  +K E GVHR+
Sbjct: 126 DLARMYIRYAERHGWTVTVLDEITSDLGGYKDATLSIRSKGDSADGVWSRMKFEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + VYP  ++  E++I ESD RID +R+SG GGQ VNTTDSAV
Sbjct: 186 QRVPVTESQGRVHTSAAGVLVYPEPEEVAEVQIDESDLRIDVFRSSGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTGVVV CQ ERSQ +NKA+A  +L A+L  +  ++    A+   +S+   +   
Sbjct: 246 RITHLPTGVVVTCQNERSQLQNKARALQVLAARLQAMAEEQASAEASADRASQIRTVDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
            +IR+Y   P   + D R   +  +   VLDG
Sbjct: 306 ERIRTYNF-PENRITDHRIGFKAHNLDQVLDG 336


>gi|300812481|ref|ZP_07092907.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496542|gb|EFK31638.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 361

 Score =  211 bits (538), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 92/345 (26%), Positives = 166/345 (48%), Gaps = 11/345 (3%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +   ++   R   +     DP +  +      + +E   +   +   ++ +    +    
Sbjct: 5   MVQLESLEVRYEEIQEMMADPEVIADTKRYMEITKEEADMREVVQKFRKFKADKEEIAGN 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGT 128
            E+  +  D  +++        ++ E+   +       L     D  D  +E+   AGG 
Sbjct: 65  KEIIADGSDPELVEMAKMENSELEDEISQLEDEIKILMLPKDPNDDKDIIMEIRGAAGGD 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  LLRMY ++AE + +    ++    E  G K   ++I G   Y  LK E G H
Sbjct: 125 EASLFAGDLLRMYEKYAENQGWNVSIVDSEQTEVGGYKRVAIMITGNKVYSKLKYENGAH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ RI   +S  R HTS +++ V P   + ++I++   + R+D YR+SGAGGQH+N T S
Sbjct: 185 RVQRIPVTESAGRVHTSTATVAVMP-EYEQVDIDLDPKEIRVDVYRSSGAGGQHINKTSS 243

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+TH+PTG+VV  Q +RSQ +N+A+A  +L++++Y+    +  +        K  +G 
Sbjct: 244 AVRMTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQNRD--KYDAKRKNAVGT 301

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G    +IR+Y   P   V D R  +       +++G+LD+ + A 
Sbjct: 302 GDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEVIDAL 345


>gi|255007722|ref|ZP_05279848.1| peptide chain release factor 1 [Bacteroides fragilis 3_1_12]
 gi|313145421|ref|ZP_07807614.1| peptide chain release factor 1 [Bacteroides fragilis 3_1_12]
 gi|313134188|gb|EFR51548.1| peptide chain release factor 1 [Bacteroides fragilis 3_1_12]
          Length = 370

 Score =  211 bits (538), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 97/359 (27%), Positives = 168/359 (46%), Gaps = 20/359 (5%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +  D  V R   ++T   DP +  +      L +E + LD+ +   KE    L +  
Sbjct: 6   SILEKLDGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKDLDDLMKARKEYMQLLANIE 65

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAG 126
              ++   E D  + +   + +   +  +   +       + +   D  +A LE+  G G
Sbjct: 66  EAKDILSNESDTDMREMAKEEMDNSQERLPVLEEEIKLLLVPADPQDGKNAILEIRGGTG 125

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMY ++ E + +K E    ++G   G K     + G N YG LK E G
Sbjct: 126 GDEAAIFAGDLFRMYAKFCETKGWKMEVSSANEGAAGGYKEIICSVTGDNVYGTLKYESG 185

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +S+ V P  ++   + I+E + + DT+R+ GAGGQ+VN  
Sbjct: 186 VHRVQRVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKV 244

Query: 247 DSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           +S VR+ +I           ++++C + R Q KNK +A   LR  +Y+ E QK   I +I
Sbjct: 245 ESGVRLRYIWKNPNTGVAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDI 302

Query: 299 GESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               KT +  G +   IR+Y   P   + D R N    + +  +DGD+ + +      +
Sbjct: 303 ASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQECIDKLTVAE 360


>gi|313891751|ref|ZP_07825356.1| peptide chain release factor 1 [Dialister microaerophilus UPII
           345-E]
 gi|313119745|gb|EFR42932.1| peptide chain release factor 1 [Dialister microaerophilus UPII
           345-E]
          Length = 359

 Score =  211 bits (538), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 105/346 (30%), Positives = 175/346 (50%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC----DNLI 71
                 R   L  K  DP + +N  + +   +E   L   ++  ++ +           I
Sbjct: 6   LQGIENRYLTLEDKLSDPSVIENQEKWRKFSKEHAELGEIVTLYRQYKKVFETKNAALEI 65

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L +   EE      ++  +  + I+          +     DS +  LE+ AG GG E+ 
Sbjct: 66  LNDKNQEELFELAKEDLKEAEKEIEKLEHQLHLLLIPKDPNDSRNVILEIRAGTGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   LL+MY ++AE RK++   +++++ +  G +     I G NAY  LK E GVHR+ 
Sbjct: 126 LFVADLLKMYLKFAEHRKWRCSIVDMNETDLGGYREVICTIDGHNAYSILKFESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S+ R HTS  ++ V P   + ++IEIS+ D R+D YRASGAGGQH+N T SA+R
Sbjct: 186 RIPETESSGRVHTSAVTVAVLP-EAEDVDIEISKEDIRVDVYRASGAGGQHINKTSSAIR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ ER Q +N+ +A  +L+A+LY+  L+K    +   ++ K ++G G  
Sbjct: 245 ITHLPTGIVVTCQNERDQRQNREKAMQILKARLYDEALRK--TKSETAQNRKEQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +IR+Y   P   + D R  +        ++G ++  +   +   
Sbjct: 303 SERIRTYNY-PQGRITDHRIGVSVYQMDSFMNGYMEPIIDRLIEAD 347


>gi|153952433|ref|YP_001398893.1| peptide chain release factor 1 [Campylobacter jejuni subsp. doylei
           269.97]
 gi|166223543|sp|A7H5W3|RF1_CAMJD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|152939879|gb|ABS44620.1| peptide chain release factor 1 [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 355

 Score =  211 bits (538), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 114/345 (33%), Positives = 179/345 (51%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  ++R   LN+      +  ++ +   L +E+++L+  +   KE    L +      L
Sbjct: 6   LDPFLKRFEELNSLLSSSDILNDISKMTTLSKEQKNLEPIVLKTKEYLKTLDNIEENKAL 65

Query: 76  ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +      +E     +      E  +   L     D  + +LE+ AG GG E+  + 
Sbjct: 66  LNDPELGELAKEELKTLEELKPKLEEEIKILLLPKDLNDERNIFLEIRAGTGGDEASLFV 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L++ Y R+AE R +K E +   +G   G K   +L+KG  AY  LK E G HR+ R+ 
Sbjct: 126 GDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHRVQRVP 185

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P   D IEIEI+ +D ++D  R+SG GGQ VNTTDSAVRITH
Sbjct: 186 QTESQGRVHTSAITVAVMP-EVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV  Q  +SQHKNK  A  +L+A+LY  E+Q+ E +A   E+ K+++G G    +
Sbjct: 245 IPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQENERLAKESEARKSQVGSGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++ DG  D+ ++  +   +
Sbjct: 303 IRTYNF-PQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQ 346


>gi|78780006|ref|YP_398118.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9312]
 gi|119361576|sp|Q318L3|RF1_PROM9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78713505|gb|ABB50682.1| bacterial peptide chain release factor 1 (bRF-1) [Prochlorococcus
           marinus str. MIT 9312]
          Length = 364

 Score =  211 bits (538), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 100/348 (28%), Positives = 169/348 (48%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
              A +    L  +  DP +  +  + + + RER  L+  +    ++ D   +      L
Sbjct: 10  LKTASESFENLEVQLADPDIANDPKKLESIARERSKLEPLVIDFNKLLDTDKEIEDSKNL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130
             E  +   ++   +       E + +  +            D     LE+ AGAGG+E+
Sbjct: 70  LKENRNDKEMESLINEELINLEECKNQLIQKTTIALLPKDPRDERSVMLEIRAGAGGSEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+ +K  +  + +   + +  G K   + +KG + Y  LK E GVHR+
Sbjct: 130 CIWAGDLARMYERYGQKIGWSVKPVSASESDMGGFKELVISVKGDSVYSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +E++I  +D  + T R+ GAGGQ+VN  ++A+
Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADPVEVKIDPTDLEVGTARSGGAGGQNVNKVETAI 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C QERSQ +N+ +A  +LRAKLYE++L+  E  A       +++G G 
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLK--EANAKERSQRLSQVGTGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R      S   +L G LD+ + A +A ++
Sbjct: 307 RSEKIRTYNFKD-NRTTDHRLG-SNFSLEPILAGQLDEVIDACIAQEQ 352


>gi|53712203|ref|YP_098195.1| peptide chain release factor 1 [Bacteroides fragilis YCH46]
 gi|60680383|ref|YP_210527.1| peptide chain release factor 1 [Bacteroides fragilis NCTC 9343]
 gi|253563758|ref|ZP_04841215.1| peptide chain release factor 1 [Bacteroides sp. 3_2_5]
 gi|265765536|ref|ZP_06093811.1| peptide chain release factor 1 [Bacteroides sp. 2_1_16]
 gi|61214601|sp|Q64XW5|RF1_BACFR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|81316547|sp|Q5LH11|RF1_BACFN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|52215068|dbj|BAD47661.1| peptide chain release factor 1 [Bacteroides fragilis YCH46]
 gi|60491817|emb|CAH06575.1| putative peptide chain release factor 1 [Bacteroides fragilis NCTC
           9343]
 gi|251947534|gb|EES87816.1| peptide chain release factor 1 [Bacteroides sp. 3_2_5]
 gi|263254920|gb|EEZ26354.1| peptide chain release factor 1 [Bacteroides sp. 2_1_16]
 gi|301161917|emb|CBW21461.1| putative peptide chain release factor 1 [Bacteroides fragilis 638R]
          Length = 370

 Score =  211 bits (538), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 97/359 (27%), Positives = 168/359 (46%), Gaps = 20/359 (5%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +  D  V R   ++T   DP +  +      L +E + LD+ +   KE    L +  
Sbjct: 6   SILEKLDGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYMQLLANIE 65

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAG 126
              ++   E D  + +   + +   +  +   +       + +   D  +A LE+  G G
Sbjct: 66  EAKDILSNESDADMREMAKEEMDNSQERLPVLEEEIKLLLVPADPQDGKNAILEIRGGTG 125

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMY ++ E + +K E    ++G   G K     + G N YG LK E G
Sbjct: 126 GDEAAIFAGDLFRMYAKFCETKGWKMEVSSANEGAAGGYKEIICSVTGDNVYGTLKYESG 185

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +S+ V P  ++   + I+E + + DT+R+ GAGGQ+VN  
Sbjct: 186 VHRVQRVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKV 244

Query: 247 DSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           +S VR+ +I           ++++C + R Q KNK +A   LR  +Y+ E QK   I +I
Sbjct: 245 ESGVRLRYIWKNPNTGVAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDI 302

Query: 299 GESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               KT +  G +   IR+Y   P   + D R N    + +  +DGD+ + +      +
Sbjct: 303 ASKRKTMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQECIDKLTVAE 360


>gi|332637164|ref|ZP_08416027.1| peptide chain release factor 1 [Weissella cibaria KACC 11862]
          Length = 361

 Score =  211 bits (538), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 108/352 (30%), Positives = 176/352 (50%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL- 70
           +F+     V R   ++    DP +  +      L +E   L   +   K  +D +     
Sbjct: 4   IFEKVQAVVDRYDEISEMISDPDVISDTQRFMALSKEEGSLRETVETFKRYKDVVDGIEG 63

Query: 71  --ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAG 126
              +L   L + +   + +      + + E   +Q + L       D  +  +E+H  AG
Sbjct: 64  NEEMLNEGLGDAELEEMAKDELKELKAEKETLEEQIKILLLPKDPNDDKNIIMEIHGAAG 123

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E   +A  L  MY R+AEK+ +  E ++ +  E  G K   L+I G N Y  LK E G
Sbjct: 124 GDEGALFAADLYDMYQRYAEKQGWNVEIIDENKTEIGGYKEIVLMITGNNVYSKLKFENG 183

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   +S  R HTS +++ V P   + ++IEI + D R+D YR+SGAGGQHVN T
Sbjct: 184 AHRVQRVPETESAGRVHTSTATVGVMP-EYEDVDIEIEDKDLRVDVYRSSGAGGQHVNKT 242

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+TH+P+G+VV  Q +RSQ +N+A+A  +L+A++Y+    + E      E  KT +
Sbjct: 243 SSAVRMTHLPSGIVVAMQDQRSQQQNRAKALEILKARVYDYYASQNEAE--YAEQRKTAV 300

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       +++G+L+D + A +   +
Sbjct: 301 GTGDRSERIRTYNY-PQNRVTDHRIGLSLNKLDRIMNGELEDVIDALIIADQ 351


>gi|251771816|gb|EES52391.1| peptide chain release factor 1 [Leptospirillum ferrodiazotrophum]
          Length = 362

 Score =  211 bits (538), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 110/347 (31%), Positives = 183/347 (52%), Gaps = 14/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +   R   L+ K   P + ++    + L  ++  L   +    + +    +   L   
Sbjct: 15  LQSMRDRFDELSGKMASPEIARSPDLYRKLAMDQAELAPVVELYDQWKRLRKEQEEL--- 71

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTESQ 131
            L  DD  + +  S   +R++  +E  +       L   + D  + ++E+ AGAGG E+ 
Sbjct: 72  DLIRDDPQMAELVSGEDRRLREVLEGTELRLVDAILPKDQRDERNLFIEIRAGAGGEEAA 131

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+ E++ F+ E +E ++ +  G K   + ++G NA+  LK E GVHR+ 
Sbjct: 132 LFAAELGRMYLRFVERQGFRAEVMESNETDIGGSKEFIIYVQGRNAFSRLKYESGVHRVQ 191

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ + P     +E++I + D RIDT+ +SGAGGQ VNTT SAVR
Sbjct: 192 RVPVTEAGGRIHTSTVTVAILP-EASEVEVDIEQKDLRIDTFCSSGAGGQSVNTTYSAVR 250

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIP+G+VV CQ ERSQ KN+ +A ++LR++L E E+ ++ +   I    KT +G G  
Sbjct: 251 ITHIPSGIVVSCQDERSQLKNRTKAMSVLRSRLLEQEVSRQNQE--IASQRKTLVGSGDR 308

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       V++G+L+  + A  A  +
Sbjct: 309 SERIRTYNF-PQNRVTDHRIGLTLYQLDRVMEGELEPLVDALRAHDR 354


>gi|294678208|ref|YP_003578823.1| peptide chain release factor 1 [Rhodobacter capsulatus SB 1003]
 gi|294477028|gb|ADE86416.1| peptide chain release factor 1 [Rhodobacter capsulatus SB 1003]
          Length = 351

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 120/344 (34%), Positives = 177/344 (51%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL-E 74
                 R  FL  K    +      E   L RE   L   ++ I   +  L D       
Sbjct: 7   LAQITARFEFLEAKL---NTALPPAEIATLSREYSDLRPVVTEIAAYRQSLDDLAEAEGW 63

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           L+  E      +E      RI    +  +   L    AD+  A LE+  G GG E+  +A
Sbjct: 64  LSDPEMKTLAEEELPRLKARIPAMEQALRLALLPKDAADARPAILEIRPGTGGEEAALFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           + L RMY R AEK  ++ E LE    E  G+K A   I+G   +  LK E GVHR+ R+ 
Sbjct: 124 HDLWRMYERHAEKMGWRFERLEFTATELGGVKEAMARIEGEGVFARLKYESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P   + ++I+I  +D RIDT R+SGAGGQHVNTTDSAVRITH
Sbjct: 184 ETEAGGRIHTSAATVAVLP-EAEEVDIDIPAADIRIDTMRSSGAGGQHVNTTDSAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG++V    E+SQH+N+A A  +LRA+LYE+E ++        E+ ++++G G    +
Sbjct: 243 LPTGIIVTSS-EKSQHQNRANAMAVLRARLYEIERERL--ATERAENRRSQVGSGDRSER 299

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+   +   +L GDL + + A +A  +
Sbjct: 300 IRTYNF-PQGRMTDHRINLTLYALPQILAGDLGEVIDALVAHDQ 342


>gi|126728795|ref|ZP_01744610.1| peptide chain release factor 1 [Sagittula stellata E-37]
 gi|126710725|gb|EBA09776.1| peptide chain release factor 1 [Sagittula stellata E-37]
          Length = 349

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 110/344 (31%), Positives = 173/344 (50%), Gaps = 14/344 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 RL ++  +        +++    L RE   L   +  I E +    D      +
Sbjct: 7   LHQIKARLEYVEAQMATGG--GDIV---ALGREFAELSPVVRQIAEWERLTSDIEEAEAM 61

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +  ++ +E   +L+      E   Q   L    AD+  A LE+  G GG E+  +A
Sbjct: 62  LADPEMRALAEEELPDLRAALPAAEKAVQLALLPKDAADARPAVLEIRPGTGGDEAALFA 121

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+AE   ++ + +E    E  G+K   + + G   +  LK E GVHR+ R+ 
Sbjct: 122 GDLARMYQRYAEAHGWRWDVIEEQMSELGGVKELVVRVVGEGVFARLKFESGVHRVQRVP 181

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++I I+ +D RIDT R+SGAGGQHVNTTDSAVRITH
Sbjct: 182 ETESGGRIHTSAATVAVLP-EAEEVDIAIAAADIRIDTMRSSGAGGQHVNTTDSAVRITH 240

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV    E+SQH+N+  A  +LR +L++LE  K    A      K ++G G    +
Sbjct: 241 LPTGIVVTSS-EKSQHRNREIAMQVLRTRLFDLERSK--ADAARSADRKAQVGSGDRSER 297

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R  +       ++ GDLD+ + A ++  +
Sbjct: 298 IRTYNF-PQGRMTDHRIGLTLYKLDAIMGGDLDEIIDALISEHQ 340


>gi|50365449|ref|YP_053874.1| peptide chain release factor 1 [Mesoplasma florum L1]
 gi|61214613|sp|Q6F0I3|RF1_MESFL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|50364005|gb|AAT75990.1| peptide chain release factor 1 [Mesoplasma florum L1]
          Length = 363

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 114/347 (32%), Positives = 176/347 (50%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72
            +   +R+  ++   +   +  +V +   L +ER +L   +    E +     + D   +
Sbjct: 9   LETMQKRVDQIDKDLQSEEIVSDVKKMLELNKERANLIEVVEKFIEYKTIIQSIADAKEI 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L    + +   + +      +     +    +   L     D  +  +E+   AGG E+ 
Sbjct: 69  LGNEKDAEMIELAKMELSENEDAVEPIVAIIEELLLPKDPNDDKNVIVEIRGAAGGDEAN 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY  +AE + +K   L+ +  E  G    + ++KG   Y  LK E G HR+ 
Sbjct: 129 IFAGDLLRMYKLYAETQNWKITMLDANSSEAGGFSQVSFMVKGDRVYSKLKFESGAHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R  TS +++ V P     +EIEI  SD RIDTYR+SGAGGQHVNTTDSAVR
Sbjct: 189 RVPKTEAKGRIQTSTATVAVLP-EMSDVEIEIKNSDLRIDTYRSSGAGGQHVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTGVV   Q  RSQH NK  A  MLRA++YE EL+K++  A+   + K  +G G  
Sbjct: 248 ITHIPTGVVAASQDGRSQHDNKDIAMTMLRARIYEAELEKQQAEAD--ATRKNAVGTGAR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       V++G +DDF+ A +  ++
Sbjct: 306 SEKIRTYNY-PQNRVTDHRVGLTLNKLDQVMEGKIDDFIIALVNDEQ 351


>gi|254387523|ref|ZP_05002762.1| peptide chain release factor 1 [Streptomyces clavuligerus ATCC
           27064]
 gi|294815090|ref|ZP_06773733.1| Peptide chain release factor 1 [Streptomyces clavuligerus ATCC
           27064]
 gi|326443452|ref|ZP_08218186.1| peptide chain release factor 1 [Streptomyces clavuligerus ATCC
           27064]
 gi|197701249|gb|EDY47061.1| peptide chain release factor 1 [Streptomyces clavuligerus ATCC
           27064]
 gi|294327689|gb|EFG09332.1| Peptide chain release factor 1 [Streptomyces clavuligerus ATCC
           27064]
          Length = 356

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 119/347 (34%), Positives = 176/347 (50%), Gaps = 13/347 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  ++ +   + L  +  DP +  +   A+ L +    L   +   +  +    D   
Sbjct: 1   MFEAVEDLIGEHAGLEKQLADPSVHADQANARKLSKRYAELTPIVGTYRSWKLTGEDIDT 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EL    DD     E  +  QR +   E  +   +    +D  D  LEV AGAGG ES 
Sbjct: 61  AREL--AADDPDFAAEVKELEQRREELTEKLRLLLVPRDPSDDKDVILEVKAGAGGDESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-------AYGWLKGE 184
            +A  LLRMY R+AE+  +KTE +   + E  G K   + +K           +  LK E
Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIINSTESELGGYKDVQVAVKTKGNAEPGQGVWARLKYE 178

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS + + V P   + I++EI+ +D RID YR+SG GGQ VN
Sbjct: 179 GGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEIDVEINPNDLRIDVYRSSGPGGQSVN 237

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR++L     ++ E+ A     S+ 
Sbjct: 238 TTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAEKEAADARRSQV 297

Query: 305 E-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +    +IR+Y   P   + D R   +  +   VLDGDLD  ++A 
Sbjct: 298 RTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLDAVIQAC 343


>gi|149192200|ref|ZP_01870417.1| bacterial peptide chain release factor 2 (RF-2) [Vibrio shilonii
           AK1]
 gi|148833958|gb|EDL50978.1| bacterial peptide chain release factor 2 (RF-2) [Vibrio shilonii
           AK1]
          Length = 248

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 150/246 (60%), Positives = 192/246 (78%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D++D Y+++ +G+GGTE+QDW NM+LRMY RWAE + FKTE +E+ +GE AG+K
Sbjct: 1   MFSGDHDASDCYIDLQSGSGGTEAQDWTNMMLRMYLRWAEAKGFKTEVIEVSEGEVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            AT+ I G  AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S +VYP +DD+I+I+I+ S
Sbjct: 61  GATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFVYPEIDDNIQIDINPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVNTT+SAVRITH+PT +VVQCQ +RSQHKNK QA   LRAKL+E
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            ELQK+       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F
Sbjct: 181 FELQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|163739713|ref|ZP_02147121.1| peptide chain release factor 1 [Phaeobacter gallaeciensis BS107]
 gi|161386943|gb|EDQ11304.1| peptide chain release factor 1 [Phaeobacter gallaeciensis BS107]
          Length = 351

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 174/344 (50%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +QR  +L     +     ++     L +E   L      I   +  LCD     ++
Sbjct: 7   LEQILQRFQYLEAAMAEGVAGADIA---ALAKEYSDLRPVAEQITAYRRLLCDLEEAEQM 63

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E    L+          Q   L   EAD+  A LE+  G GG E+  +A
Sbjct: 64  LADPDMAELAEEELPQLRAALPEAEHALQLALLPRDEADARPAMLEIRPGTGGDEAALFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE R +  E +E    E  G+K     +KG N +  LK E GVHR+ R+ 
Sbjct: 124 GDLLRMYQRYAEARGWGFEIIEEQTTELGGLKEVVAHVKGENVFARLKYESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + +++ I   D RIDT RASGAGGQHVNTTDSAVRITH
Sbjct: 184 VTESGGRIHTSAATVAVLP-EAEDVDLRIDPGDLRIDTMRASGAGGQHVNTTDSAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG++V    E+SQH+N+  A  ++R +LY+LE Q+ +          +++G G    +
Sbjct: 243 IPTGIIV-VSSEKSQHRNREIAMQVMRTRLYDLERQRIDSER--SADRASQVGSGDRSER 299

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++ GDLD+ + A  A  +
Sbjct: 300 IRTYNF-PQGRMSDHRINLTLYKLDQIMQGDLDEIIDALTADDQ 342


>gi|161507266|ref|YP_001577220.1| peptide chain release factor 1 [Lactobacillus helveticus DPC 4571]
 gi|260102570|ref|ZP_05752807.1| peptide chain release factor RF1 [Lactobacillus helveticus DSM
           20075]
 gi|172048215|sp|A8YUJ1|RF1_LACH4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|160348255|gb|ABX26929.1| Peptide chain release factor 1 [Lactobacillus helveticus DPC 4571]
 gi|260083597|gb|EEW67717.1| peptide chain release factor RF1 [Lactobacillus helveticus DSM
           20075]
          Length = 362

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 102/347 (29%), Positives = 170/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V     L     DP +  +      + +E   L   +   K+ ++   +     E+
Sbjct: 8   LEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKEDKKEIADNKEI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++   +    I+ E+   +       L     D  D  +E+   AGG E+ 
Sbjct: 68  IANETDSDLIEMAKEENAEIEKEIPELEDQIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE++ +K   ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAERQNWKVSMIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + ++I+I   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMP-EYEQVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    + +  A      K  IG G  
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQ--AKYDAKRKNAIGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       V++G+LD+ + A +   +
Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQ 350


>gi|332877766|ref|ZP_08445507.1| peptide chain release factor 1 [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332684346|gb|EGJ57202.1| peptide chain release factor 1 [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 357

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 97/350 (27%), Positives = 169/350 (48%), Gaps = 12/350 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  +   QR   ++     P +  +      L +E + L   +   +E      +   
Sbjct: 1   MLDKLNIVKQRFDEISDLIIQPDIIADQKRYIQLNKEYKDLKELMDKREEYITVTGNLSE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAGG 127
             E+  +  D  +++     L+  K  +   + E           D+ +A +E+ AG GG
Sbjct: 61  AEEIIADGSDPEMVEMAKLQLEESKERLPQLEEEIKYMLIPKDPEDAKNAVMEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYT++ + + + T  ++ ++G   G K     + G N YG LK E GV
Sbjct: 121 DEASIFAGDLYRMYTKYCQSKGWSTSVMDFNEGTAGGYKEIIFEVTGDNVYGTLKFEAGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P  ++     +  +D +I    ++G GGQ VNTT 
Sbjct: 181 HRVQRVPQTETQGRVHTSAATVIVLPEAEEFDVE-LDMADVKIIRTTSTGPGGQSVNTTY 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SA+++ HIPTG+ V+CQ E+SQHKN  +A  +LR++LYE+EL K+ E        K+ + 
Sbjct: 240 SAIQLQHIPTGIEVRCQDEKSQHKNLDKALKVLRSRLYEMELAKKME--ADSARRKSMVS 297

Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            G +   IR+Y   P   V D R  +      +V++GD+   +      +
Sbjct: 298 SGDRSAKIRTYNY-PQGRVTDHRIGLTLYDLQNVINGDVQRLIDELQLAE 346


>gi|323466867|gb|ADX70554.1| Peptide chain release factor 1 [Lactobacillus helveticus H10]
          Length = 362

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 101/347 (29%), Positives = 170/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V     L     DP +  +      + +E   L   +   K+ ++   +     E+
Sbjct: 8   LEGLVAHYEELQEMMADPEVINDTKRYMEISKEEADLREVVQKYKKYKEDKKEIADNKEI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++   +    I+ E+   +       L     D  D  +E+   AGG E+ 
Sbjct: 68  IANETDSDLIEMAKEENAEIEKEIPELEDQIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE++ +K   ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAERQNWKVSMIDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + ++I+I   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMP-EYEQVDIDIDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    + +  A      K  +G G  
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYESQNQ--AKYDAKRKNAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       V++G+LD+ + A +   +
Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQ 350


>gi|255534225|ref|YP_003094596.1| Peptide chain release factor 1 [Flavobacteriaceae bacterium
           3519-10]
 gi|255340421|gb|ACU06534.1| Peptide chain release factor 1 [Flavobacteriaceae bacterium
           3519-10]
          Length = 361

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 91/346 (26%), Positives = 163/346 (47%), Gaps = 12/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QR + +      P +  +  +   L +E   L   +S   +    +       E+
Sbjct: 9   LEAIKQRYNEVADLIIQPDIISDQKKYSALNKEYSDLGKIVSVFDQYTQAINSIAESDEI 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
             +  D   ++           ++   + E          AD  +  +E+ AG GG E+ 
Sbjct: 69  IADGSDKEFVEMAKMEKNEALEKIPQIEEELKVLLIPKDPADDKNVIVELRAGTGGDEAA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   + R Y  + + + +K E  + ++  + G K   L ++G   YG +K E GVHR+ 
Sbjct: 129 IFVEDVYRAYAMFFKTKGWKHEITDANEASK-GYKELILKVEGEGVYGIMKFESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P   + ++ E++ +D  + T R+ GAGGQ+VN  ++ V+
Sbjct: 188 RVPETESQGRVHTSAITVAVLP-EAEEVDFELNPADIEMQTSRSGGAGGQNVNKVETKVQ 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +TH P+G+VV CQQ RSQ  N+  A  MLR KLY++ELQ+ +   +I    KT +  G +
Sbjct: 247 LTHKPSGMVVVCQQARSQLANRELAMEMLRTKLYDIELQRVQ--GDIAAQRKTMVSTGDR 304

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              I++Y   P   V D R N    +    ++GD+ + + A +  +
Sbjct: 305 SAKIKTYNY-PQGRVTDHRVNKSVYNLDAYMNGDIQEMIDAVIMAE 349


>gi|1526559|dbj|BAA08795.1| peptide termination factor [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 370

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 117/347 (33%), Positives = 181/347 (52%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR---LCDNLIL 72
            +   +RL  +    ED ++ +++ +   L +E+ +L+  +    E +     + D   +
Sbjct: 9   LETMQKRLFQIQKDLEDENILKDIKKFTELNKEKANLEEVVEKFVEYKKAVDHIKDAKAI 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LE   + +   + +   D        ++   +   L     D  +  +E+   AGG E+ 
Sbjct: 69  LENEKDSELIELAKIELDENNDKVEHLQQVIEEMLLPKDPNDEKNVIIEIRGAAGGDEAN 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY  +AE + +K   LE   GE  G      +IKG   Y  LK E G HR+ 
Sbjct: 129 IFAGDLLRMYKLYAETQNWKINILEASLGEAGGYSQVVFMIKGDRVYSKLKFESGAHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R  TS +++ V P     +EIEI  +D RIDTYRASGAGGQHVNTTDSAVR
Sbjct: 189 RVPKTEAKGRIQTSTATVAVLP-EMSEVEIEIRSNDLRIDTYRASGAGGQHVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV  Q  RSQH NK  A  MLRAK+YE E++K++  A+   + K  +G G  
Sbjct: 248 ITHLPTGIVVTSQDGRSQHDNKDIAMTMLRAKVYEAEVEKQQAQAD--ATRKNAVGTGAR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             + R+Y   P   V D R  +       V++G++D+F+ A +  ++
Sbjct: 306 SEKFRTYNY-PQNRVTDHRVGLTLNKLDQVMEGNIDEFIIALINEEQ 351


>gi|116620705|ref|YP_822861.1| peptide chain release factor 2 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116223867|gb|ABJ82576.1| bacterial peptide chain release factor 2 (bRF-2) [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 322

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 161/310 (51%), Positives = 210/310 (67%), Gaps = 2/310 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M++R+ L+ A++   +I+    D   + EL    +   +  +   +L+     +E  +  
Sbjct: 1   MQDRKRLEEAVANDDQIRALTDDLDTMFEL--AREGEPVQADIERDLKPYSELLERLETA 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGE D+  A + +H GAGGTESQDWA MLLRMY RWAE+ KF T   +  +GE AGI
Sbjct: 59  MLLSGENDARSAIVTIHPGAGGTESQDWAEMLLRMYLRWAEREKFATVITDRLEGEGAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KS T  + G NAYG L+ E GVHRLVRISP+D+N+RRHTSF+S++V+P VDD I+I+I +
Sbjct: 119 KSVTFEVNGENAYGLLQSEIGVHRLVRISPFDANARRHTSFASVFVFPQVDDEIKIDIQD 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D RIDT+RASGAGGQHVN TDSAVRITH PTG+VVQCQ ERSQHKN+A A   LRA LY
Sbjct: 179 KDLRIDTFRASGAGGQHVNMTDSAVRITHFPTGIVVQCQNERSQHKNRATAMKQLRACLY 238

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E EL+K+       E SK EI +G QIR+YVL PY++VKDLR+ +       VL+G LD 
Sbjct: 239 EHELEKKRAETRETEDSKLEINFGSQIRNYVLAPYRLVKDLRSKLALGDVDRVLEGGLDP 298

Query: 346 FMKATLAIKK 355
            + + L  +K
Sbjct: 299 LIHSYLVWRK 308


>gi|218263804|ref|ZP_03477780.1| hypothetical protein PRABACTJOHN_03470 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222477|gb|EEC95127.1| hypothetical protein PRABACTJOHN_03470 [Parabacteroides johnsonii
           DSM 18315]
          Length = 369

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 93/353 (26%), Positives = 158/353 (44%), Gaps = 18/353 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   ++T   DP++  +      L +E + L+  I   KE    L        +
Sbjct: 11  LEGLVSRFEEVSTLITDPNVIADQKRYVKLTKEYKELNEIIKARKEYMQCLNGLEEARLM 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES---LLSGEADSNDAYLEVHAGAGGTESQD 132
             E D         +         E ++      + +   D  +A +E+  G GG E+  
Sbjct: 71  MAETDPEMKEIAREEAAACEARIPELEEEIKLLLVPADPQDDKNAIVEIRGGTGGDEAAL 130

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY ++ E + +K       +G   G K     + G   YG LK E GVHR+ R
Sbjct: 131 FAGDLYRMYVKYCEMKGWKVALSSCSEGAAGGFKEIIFTVSGEKVYGTLKYESGVHRVQR 190

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P  D+     I+E + + DT+R+ GAGGQ+VN  +S VR+
Sbjct: 191 VPATETQGRVHTSAATVAVLPEADEFDVE-INEGEIKWDTFRSGGAGGQNVNKVESGVRL 249

Query: 253 THIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            ++           ++++C + R Q KNK +A   LR+ +Y+ E QK  +  +I    KT
Sbjct: 250 RYVWKNPNTGVSEEILIECTETRDQPKNKERALTRLRSFIYDKEHQKYLD--DIANKRKT 307

Query: 305 EIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +  G +   IR+Y   P   + D R N    + S  +DGD+   +   +  +
Sbjct: 308 MVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDGDIQGCLDQLIVAE 359


>gi|323497777|ref|ZP_08102791.1| peptide chain release factor RF-2 [Vibrio sinaloensis DSM 21326]
 gi|323317124|gb|EGA70121.1| peptide chain release factor RF-2 [Vibrio sinaloensis DSM 21326]
          Length = 248

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 148/246 (60%), Positives = 192/246 (78%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D++D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FKTE +E+ +GE AG+K
Sbjct: 1   MFSGDHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEVIEVSEGEVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            AT+ I G  AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I+I+I+ S
Sbjct: 61  GATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNIQIDINPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+E
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LE+QK+       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F
Sbjct: 181 LEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|296387792|ref|ZP_06877267.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa
           PAb1]
          Length = 248

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 156/247 (63%), Positives = 193/247 (78%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE D N+AYL++ AG+GGTE+QDWANMLLRMY RWA+K  F    +E+ +GE AGIK
Sbjct: 1   MFSGEMDPNNAYLDIQAGSGGTEAQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            AT+ IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSF++++V P +DD+IEIEI+ +
Sbjct: 61  GATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFTAVFVSPEIDDNIEIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRAKLYE
Sbjct: 121 DLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LE+QKR   +   E SK++IGWG QIRSYVL     +KDLRT IE++    VLDGDLD++
Sbjct: 181 LEMQKRTAASQALEDSKSDIGWGHQIRSYVLD-QSRIKDLRTGIERSDCDKVLDGDLDEY 239

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 240 LEASLKQ 246


>gi|300781808|ref|YP_003778203.1| hypothetical protein PSPTO_1500 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|290758052|gb|ADD53002.1| protein of unknown function [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 293

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 164/290 (56%), Positives = 215/290 (74%), Gaps = 1/290 (0%)

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D   LL ++ EE+D + + + +  ++R++  +E  +F  + SGE D N+AYL++ A
Sbjct: 3   SGLVDAKDLLLMSAEEEDQAAVDDVAAEVERLRASLEKLEFRRMFSGEMDPNNAYLDIQA 62

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK AT+ IKG  A+GWL+ 
Sbjct: 63  GSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRT 122

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ SD RIDTYR+SGAGGQHV
Sbjct: 123 EIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRSSGAGGQHV 182

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRA+LYE E+QKR   +   E +K
Sbjct: 183 NTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTK 242

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           ++IGWG QIRSYVL     +KDLRTNIE++    VLDGD+D+++ A+L  
Sbjct: 243 SDIGWGHQIRSYVLD-ASRIKDLRTNIERSDCDKVLDGDIDEYLIASLKQ 291


>gi|91784239|ref|YP_559445.1| peptide chain release factor 2 [Burkholderia xenovorans LB400]
 gi|91688193|gb|ABE31393.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia
           xenovorans LB400]
          Length = 280

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 151/266 (56%), Positives = 203/266 (76%), Gaps = 1/266 (0%)

Query: 88  TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
              + Q I+  V   +F  + +  AD N+A+L++ AGAGGTE+ DWA MLLR Y R+ E+
Sbjct: 14  CESDAQGIEQRVADMEFRRMFANPADPNNAFLDIQAGAGGTEACDWAAMLLRQYLRYCER 73

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           + FKTE LE  DG+ AGIK+AT+ I+G  AYG+L+ E GVHRLVR SP+DS+  RHTSFS
Sbjct: 74  KGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHRLVRKSPFDSSGGRHTSFS 133

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           S++VYP +DDSIE++I+ +D RIDTYRASGAGGQH+N TDSAVRITH+P+G+VVQCQ +R
Sbjct: 134 SVFVYPEIDDSIEVDINPADLRIDTYRASGAGGQHINKTDSAVRITHLPSGIVVQCQNDR 193

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQH+N+A+A  ML+++LYE E++KR+   +  E+ KT++GWG QIRSYVL     +KDLR
Sbjct: 194 SQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAGKTDVGWGHQIRSYVLD-NSRIKDLR 252

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAI 353
           TN+E ++   VLDGDLD F+ A+L  
Sbjct: 253 TNVEISNTKSVLDGDLDPFISASLKQ 278


>gi|323491501|ref|ZP_08096683.1| peptide chain release factor RF-2 [Vibrio brasiliensis LMG 20546]
 gi|323314255|gb|EGA67337.1| peptide chain release factor RF-2 [Vibrio brasiliensis LMG 20546]
          Length = 248

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 148/246 (60%), Positives = 192/246 (78%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ DS+D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FKTE +E+ +GE AG+K
Sbjct: 1   MFSGDHDSSDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEVIEVSEGEVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            AT+ I G  AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I+I+I+ +
Sbjct: 61  GATVKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNIQIDINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+E
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LE+QK+       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F
Sbjct: 181 LEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|212697040|ref|ZP_03305168.1| hypothetical protein ANHYDRO_01605 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675815|gb|EEB35422.1| hypothetical protein ANHYDRO_01605 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 238

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 135/236 (57%), Positives = 174/236 (73%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           + +HAGAGG E+ DWA ML+RMYTR+ E+R FK +  ++++ E  GIKSAT+ IKG  AY
Sbjct: 1   MVIHAGAGGLEATDWAEMLMRMYTRFFERRNFKFDITDLNNEEAGGIKSATIHIKGSFAY 60

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
           G+LKGE+GVHRLVRISP+DS+ RRHTSF+SI ++P ++D + +EI   D RIDTYRASGA
Sbjct: 61  GYLKGERGVHRLVRISPFDSSKRRHTSFASIDIFPELNDDMSVEIDPKDLRIDTYRASGA 120

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVN TDSAVRITHIPTGV+   Q ERSQ +NK  A  +L AKL +++ ++  E    
Sbjct: 121 GGQHVNKTDSAVRITHIPTGVIASSQAERSQTQNKETAMKLLLAKLTQIKEEEHREKIED 180

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + + T+I WG QIRSYV  PY +VKD RTN E  +   V+DGD+D F+ A LA K
Sbjct: 181 IQGNYTQIAWGSQIRSYVFHPYTLVKDHRTNFEVGNVESVMDGDIDGFIDAYLANK 236


>gi|163840178|ref|YP_001624583.1| peptide chain release factor 1 [Renibacterium salmoninarum ATCC
           33209]
 gi|189039986|sp|A9WNB3|RF1_RENSM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|162953654|gb|ABY23169.1| peptide chain release factor 1 [Renibacterium salmoninarum ATCC
           33209]
          Length = 360

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 106/352 (30%), Positives = 173/352 (49%), Gaps = 15/352 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+     +   + L  +  DP +  +   A+ L R    L   +    ++Q    D   
Sbjct: 1   MFESIQGLLDEHADLQIRLSDPAVHADQSLARKLGRRYAELSTIVEGYHQVQQLSDDLAA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E+A E+ + +      +         E  +   +     D  D  LEV AG GG ES 
Sbjct: 61  AKEMASEDSEFAAEVPVLEEQLAH--AQEKLRRLLIPRDPDDGRDVILEVKAGEGGDESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI------KGPNAYGWLKGEQ 185
            +A  L+RMY+R+AE + +K E +   + +  G K   + +           +  LK E 
Sbjct: 119 LFAADLVRMYSRYAESKGWKIEVISATESDLGGYKDIQIAVKGRSNDPAEGVFAALKFEG 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS + + V+P VD+  E+EIS++D +ID YR+SG GGQ VNT
Sbjct: 179 GVHRVQRVPVTESQGRIHTSAAGVLVFPEVDEPEEVEISQNDLKIDVYRSSGPGGQSVNT 238

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH PTG+VV  Q E+SQ +N+     +LRA++   + +  +   +     K++
Sbjct: 239 TDSAVRITHFPTGIVVAMQNEKSQLQNREAGMRVLRARILAHQQELIDAENSAV--RKSQ 296

Query: 306 I---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           I       +IR+Y   P   + D RT  +  +   V++GDL   +++ + + 
Sbjct: 297 IRTMDRSERIRTYNF-PENRIADHRTGYKSYNLDAVMNGDLGPVIQSAIEMD 347


>gi|262163922|ref|ZP_06031661.1| peptide chain release factor 2 [Vibrio mimicus VM223]
 gi|262172260|ref|ZP_06039938.1| peptide chain release factor 2 [Vibrio mimicus MB-451]
 gi|261893336|gb|EEY39322.1| peptide chain release factor 2 [Vibrio mimicus MB-451]
 gi|262027450|gb|EEY46116.1| peptide chain release factor 2 [Vibrio mimicus VM223]
          Length = 263

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 155/253 (61%), Positives = 195/253 (77%), Gaps = 1/253 (0%)

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
           E  +F  + SG+ DS+D YL++ AG+GGTE+QDW +MLLRMY RWA+ + FKTE +E+ +
Sbjct: 9   EQLEFRRMFSGDHDSSDCYLDLQAGSGGTEAQDWTSMLLRMYLRWADAKGFKTEVIEVSE 68

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
           G+ AG+KSAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP VD++I
Sbjct: 69  GDVAGLKSATVRIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEVDENI 128

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           +IEI+ +D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   
Sbjct: 129 DIEINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQ 188

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           LRAKL+ELELQK+       E +K++IGWG QIRSYVL     +KDLRT IE  +   VL
Sbjct: 189 LRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGIENRNTQAVL 247

Query: 340 DGDLDDFMKATLA 352
           DGDLD F++A+L 
Sbjct: 248 DGDLDKFIEASLK 260


>gi|160916055|ref|ZP_02078262.1| hypothetical protein EUBDOL_02082 [Eubacterium dolichum DSM 3991]
 gi|158431779|gb|EDP10068.1| hypothetical protein EUBDOL_02082 [Eubacterium dolichum DSM 3991]
          Length = 357

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 109/346 (31%), Positives = 174/346 (50%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72
            +  V R   +N     P +  +      L RE+  L   +    E +     L D   L
Sbjct: 8   LEGMVNRYHEINEMMMSPEIVSDSKMLAKLGREQADLVQVVETYTEYKNSVQALEDAKAL 67

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L    +E       E  +   +I+  +   +   +     DS++A +E+   AGG E   
Sbjct: 68  LMEDDKEIKEMAKMEIEELEPKIEGYLGKLEILLIPKDPNDSHNAIVEIRGAAGGDEGNI 127

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AE + ++ E +E+ D E  G    + ++KG   YG LK E G HR+ R
Sbjct: 128 FAGDLYRMYSKYAESQGWRIEIIEMDDCEAGGFSLVSFMVKGDGVYGRLKFESGSHRVQR 187

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P   ++ + +I  +D  I+T RASGAGGQH+N TDSAVRI
Sbjct: 188 VPKTESQGRIHTSTATVLVTP-EIEAEDFDIDMNDLEIETMRASGAGGQHINKTDSAVRI 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
            H PTG+VV+CQ  RSQH+N+A A   +R+++YE   +K EE   +    +++IG G   
Sbjct: 247 VHKPTGIVVKCQDGRSQHENRATALMTIRSRVYEEHQRKLEEEQGV--ERRSKIGTGDRA 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R          +++G + D + A  +  +
Sbjct: 305 EKIRTYNY-PQNRVTDHRIGYNVNQLDRIMEGRMQDLLDALCSADQ 349


>gi|197104299|ref|YP_002129676.1| peptide chain release factor RF-1 [Phenylobacterium zucineum HLK1]
 gi|196477719|gb|ACG77247.1| peptide chain release factor RF-1 [Phenylobacterium zucineum HLK1]
          Length = 377

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 183/347 (52%), Gaps = 15/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   +  +        +  E   L +E   L      ++ ++    +   L E+
Sbjct: 27  LDQVLDRFREIEARMGA---ASDGAEIVRLSKEHAELKPVADAVQALERARAEQPELEEM 83

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQ--FESLLSGEADSNDAYLEVHAGAGGTESQD 132
           A   D + + L        + +L    ++         + ++  A LEV AG GG E+  
Sbjct: 84  AASGDAEMAALARDELEALKERLPELEREVALLLAPKDKDENASAILEVRAGTGGDEAAL 143

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY R+A+ R ++ E   I +G+  G K     I G   +G LK E GVHR+ R
Sbjct: 144 FAGDLFRMYQRYAQTRGWRVEIDSISEGDAGGYKEIIASITGEGVFGRLKFESGVHRVQR 203

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P   + +EIE+ + D RIDTYR+SGAGGQHVN TDSAVRI
Sbjct: 204 VPATEAQGRIHTSAATVAVLP-EVEDVEIEVRDQDIRIDTYRSSGAGGQHVNKTDSAVRI 262

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV    E+SQH+N+A+A  +L+A+LY  E Q+    +   ES K+++G G   
Sbjct: 263 THLPTGIVVTSS-EKSQHQNRARAMKVLKARLY--EQQREALDSARAESRKSQVGSGDRS 319

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
            +IR+Y   P   V D R N+   + + V++G+ LDD ++  +A  +
Sbjct: 320 ERIRTYNF-PQGRVTDHRINLTLYNLAKVMEGEALDDVIEPLIAEDQ 365


>gi|15890803|ref|NP_356475.1| peptide chain release factor 1 [Agrobacterium tumefaciens str. C58]
 gi|22096038|sp|Q8U8B8|RF1_AGRT5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|15159088|gb|AAK89260.1| peptide chain release factor 1 [Agrobacterium tumefaciens str. C58]
          Length = 360

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 180/344 (52%), Gaps = 18/344 (5%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   +  +    P           L  E   L+  +  I++ +  + +   L  L 
Sbjct: 11  ELERRFGEIEARMSAGPA----ADVYVKLASEYSELEPVVKKIRDYEKAISEAADLEALL 66

Query: 77  LEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            ++     +++ ++        RI+   +  Q   L    AD   A LE+ AG GG+E+ 
Sbjct: 67  ADKTTDKDMRDLAEMELPEVETRIRELEKDMQVLLLPKDAADEKSAILEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A  + +K E L   +GE  G K     I G   +  LK E GVHR+ 
Sbjct: 127 LFAGDLFRMYERFAATKGWKVEVLSASEGEAGGYKEIIATITGRGVFSKLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS +++ V P   + I++EI   D RIDT RASGAGGQHVNTTDSAVR
Sbjct: 187 RVPETEASGRIHTSAATVAVLP-EAEDIDVEIRPEDIRIDTMRASGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG++V    E+SQH+N+A+A  +LR++LY++E QK +         K+++G G  
Sbjct: 246 ITHLPTGLIVTSS-EKSQHQNRAKAMQVLRSRLYDIERQKVDSER--SADRKSQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       V++G++D+ + A +A
Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLYKLDRVIEGEIDELVDALIA 345


>gi|34580696|ref|ZP_00142176.1| peptide chain release factor RF-2 [Rickettsia sibirica 246]
 gi|28262081|gb|EAA25585.1| peptide chain release factor RF-2 [Rickettsia sibirica 246]
          Length = 285

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 166/279 (59%), Positives = 210/279 (75%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A  E+D   L +   +L+ + +     + E L SGEAD N+ +LE++AGAGGTES DWA
Sbjct: 1   MAEAENDLETLSQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEINAGAGGTESHDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           ++++RMY R+AE+  FKTE + + +GEEAGIKS T+ I G  AYGW K E GVHRLVRIS
Sbjct: 61  SIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTETGVHRLVRIS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+++  +R TSF+S WVYP +DD+I I I + D RIDT+RASGAGGQHVNTTDSAVRITH
Sbjct: 121 PFNAAGKRMTSFASSWVYPEIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           IPTG V QCQ +RSQHKNKAQA  ML+AKLYELE+QKR +  N   ++KT+  WG QIRS
Sbjct: 181 IPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWGHQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           YVLQPY MVKDLRT+ E +    VLDGDL++F+ A LA+
Sbjct: 241 YVLQPYHMVKDLRTDYETSDTKGVLDGDLEEFVSANLAM 279


>gi|148244818|ref|YP_001219512.1| peptide chain release factor 1 [Candidatus Vesicomyosocius okutanii
           HA]
 gi|166223616|sp|A5CW65|RF1_VESOH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|146326645|dbj|BAF61788.1| peptide chain release factor RF-1 [Candidatus Vesicomyosocius
           okutanii HA]
          Length = 361

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 115/347 (33%), Positives = 178/347 (51%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    RL  ++    DP +  NV +   L  E   L       +     L +     +L
Sbjct: 9   LEQLSIRLEEVSIMLSDPEVVSNVKKFTKLSIEYAQLTPVNQQFQTYLSHLKNLEDA-QL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
            L EDD  I     + +   K  +     +           DS +  +E+ AG GG E+ 
Sbjct: 68  ILFEDDMEIKTMAKEEILNTKKILSQLDLKLKKSILPKDPNDSRNIIIEIRAGTGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L ++Y+R++EK+K+  E +    GE  G K     I G N Y  LK E G HR+ 
Sbjct: 128 IFSGDLFKIYSRYSEKQKWTIEIISSSIGEHGGFKEIIARISGINVYSKLKFESGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ + P V++  EI I+ +D RIDT+RASGAGGQHVN TDSAVR
Sbjct: 188 RVPTTESQGRIHTSACTVAIMPEVENIEEINININDVRIDTFRASGAGGQHVNKTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR- 310
           ITH+PTG VV+CQ  RSQHKNKAQA ++L +++ + +   +E+      + K  IG G  
Sbjct: 248 ITHLPTGTVVECQDGRSQHKNKAQAMSVLASRILDAQQ--QEQQEQQSSTRKELIGSGDR 305

Query: 311 --QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R N+     +++++G+L   +K  +  ++
Sbjct: 306 SQRIRTYNY-PQGRITDHRINLTLYKLTEIMEGNLSAIIKPLIIEQQ 351


>gi|193078655|gb|ABO13705.2| peptide chain release factor 2 [Acinetobacter baumannii ATCC 17978]
          Length = 305

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 161/293 (54%), Positives = 210/293 (71%), Gaps = 1/293 (0%)

Query: 47  RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
           +E+  L+N I+ +  +  +L D   +L+LA+E DD S+L++    L   + E+   +F  
Sbjct: 3   KEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELSTAEEELAKLEFRR 62

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S   D N  Y+E+ AG+GGTE+QDWA+MLLRMY RW E+  FK E +E+ DG+ AGIK
Sbjct: 63  MFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAGIK 122

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+ S
Sbjct: 123 SATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDINPS 182

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R DTYRASGAGGQH+N TDSAVR+THIPTG+VV CQ +RSQH N+  AW  LRAKLYE
Sbjct: 183 DVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQLRAKLYE 242

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           LE+QKR E A   E SK++IGWG QIRSYVL     +KDLRT +E       L
Sbjct: 243 LEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDD-SRIKDLRTGVEIQILVRFL 294


>gi|332521778|ref|ZP_08398229.1| peptide chain release factor 1 [Lacinutrix algicola 5H-3-7-4]
 gi|332042608|gb|EGI78809.1| peptide chain release factor 1 [Lacinutrix algicola 5H-3-7-4]
          Length = 358

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 101/346 (29%), Positives = 170/346 (49%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLIL 72
                QR   ++     P +  +      L RE + L    +      E  + L +   +
Sbjct: 5   LQIVKQRFDEVSDLIIQPDIITDQKRYVELNREYKDLRLLMDKRELYLEFTNNLAEAEEI 64

Query: 73  LELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +    + +   + +   D  +       E  +   +     D+ +A +E+ AG GG E+ 
Sbjct: 65  IADGSDPEMVEMAKMQYDEAKTAIPELEEEIKVLLIPKDPQDAKNAVVELRAGTGGDEAS 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYT++ E + ++ + ++  +G   G K     + G + YG LK E GVHR+ 
Sbjct: 125 IFAGDLYRMYTKYCESKGWRVDTVDYSEGTNGGFKEIQFEVSGDDVYGTLKFEAGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V+P  ++     I   D RID + +SG GGQ VNTT SAVR
Sbjct: 185 RVPQTETQGRVHTSAATVMVFPEAEEFDVE-IDPKDVRIDYFCSSGPGGQSVNTTYSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +TH PTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL K+ E         T +  G +
Sbjct: 244 LTHEPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDLELAKKMEEDAALRG--TMVTSGDR 301

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              IR+Y   P   V D R  +     S++++GD+   +   +  +
Sbjct: 302 SAKIRTYNY-PQGRVTDHRIGLTLYDLSNIVNGDIQKIIDELMLAE 346


>gi|254472406|ref|ZP_05085806.1| peptide chain release factor 1 [Pseudovibrio sp. JE062]
 gi|211958689|gb|EEA93889.1| peptide chain release factor 1 [Pseudovibrio sp. JE062]
          Length = 357

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 115/352 (32%), Positives = 180/352 (51%), Gaps = 22/352 (6%)

Query: 16  WDNAVQRLSFLNTKTED---PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
            D  + R   +  +      P +         L R+   L+  +  I+E++    D    
Sbjct: 7   LDTLLARFEGIEAEMASGPAPDV------YIKLSRDYAELEPIVMSIRELRKAEGDLEGA 60

Query: 73  LELALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             L  + D  + ++E +   +       +   +  +   L   +ADS+D  LEV AG GG
Sbjct: 61  EALLSDPDSDAEMKELAQLERDELTGVVEELTQKVRIGLLPKDKADSHDVILEVRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY R+A+   +K E +   +G+  G K     + G   +G LK E GV
Sbjct: 121 DEAALFAGDLFRMYQRFADNNGWKVEVMSSSEGDMGGFKEIVAAVTGQEVFGKLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + ++++I+ +D RIDTYRASGAGGQHVNTTD
Sbjct: 181 HRVQRVPETESGGRIHTSAATVAVLP-QAEEVDVDINPADLRIDTYRASGAGGQHVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH PTG+VV  Q ERSQHKNK +A  +LRAK+Y++E ++        E+ + ++G
Sbjct: 240 SAVRITHNPTGIVVAVQDERSQHKNKDRAMKLLRAKIYDVERER--AANERTEARRVQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       ++ G+   + + A     +
Sbjct: 298 SGDRSERIRTYNF-PQGRVTDHRIGLTLYKLDQMMTGEATGEVIDALTMDHQ 348


>gi|212690981|ref|ZP_03299109.1| hypothetical protein BACDOR_00471 [Bacteroides dorei DSM 17855]
 gi|237712531|ref|ZP_04543012.1| peptide chain release factor 1 [Bacteroides sp. 9_1_42FAA]
 gi|237726705|ref|ZP_04557186.1| peptide chain release factor 1 [Bacteroides sp. D4]
 gi|265752224|ref|ZP_06088017.1| peptide chain release factor 1 [Bacteroides sp. 3_1_33FAA]
 gi|212666213|gb|EEB26785.1| hypothetical protein BACDOR_00471 [Bacteroides dorei DSM 17855]
 gi|229435231|gb|EEO45308.1| peptide chain release factor 1 [Bacteroides dorei 5_1_36/D4]
 gi|229453852|gb|EEO59573.1| peptide chain release factor 1 [Bacteroides sp. 9_1_42FAA]
 gi|263237016|gb|EEZ22486.1| peptide chain release factor 1 [Bacteroides sp. 3_1_33FAA]
          Length = 371

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 95/354 (26%), Positives = 163/354 (46%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   ++T   DP++  +      L +E + L++ +   +E    L       ++
Sbjct: 12  LDGLVARFEEVSTLITDPNVIADQKRYVKLTKEYKDLNDIMKARREYIQCLNGLEEAKQI 71

Query: 76  ALEEDDCSILQETSDNLQRIK----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   +     +       E  +   + +   D  +A LE+  G GG E+ 
Sbjct: 72  MTNESDPEMKEMAREEANLCEVRIPELEEEIKLLLVPADPQDDRNAILEIRGGTGGDEAA 131

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++ E + +K E    ++G   G K     + G   YG LK E GVHR+ 
Sbjct: 132 IFAGDLFRMYSKYCETKGWKLEVSSANEGAAGGFKEIICSVTGDKVYGTLKYESGVHRVQ 191

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P  +      I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 192 RVPATETQGRVHTSAASVAVLPEAEPFDVE-INEGEIKWDTFRSGGAGGQNVNKVESGVR 250

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +            ++++C + R Q KNK +A + LR  +Y+ E QK   I +I    K
Sbjct: 251 LRYNWKNPNTGIVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRK 308

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T +  G +   IR+Y   P   + D R N    + +  +DGD+ D +      +
Sbjct: 309 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLTVAE 361


>gi|254304309|ref|ZP_04971667.1| peptide chain release factor RF2 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148324501|gb|EDK89751.1| peptide chain release factor RF2 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 308

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 148/303 (48%), Positives = 209/303 (68%), Gaps = 1/303 (0%)

Query: 53  DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112
            N +S  +++   + D  +L++     +     + +    + +K ++E  +   LL GE 
Sbjct: 5   KNIVSRYEKLATEIDDEEVLIDFVESGETSFENELSE-KHKILKSDIEEFEINLLLDGEY 63

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D N+A + +H+GAGGTE+ DWA+ML RMY RW   + +K   L+  +G+  G+KS T L+
Sbjct: 64  DMNNAIVTIHSGAGGTEACDWADMLYRMYLRWCNLKAYKVSELDFMEGDSVGVKSVTFLV 123

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G NAYG+LK E+GVHRLVRISP+D+N +RHTSF+S+ V P VD+++E+EI+ +D RIDT
Sbjct: 124 EGINAYGYLKSEKGVHRLVRISPFDANKKRHTSFASVEVVPEVDENVEVEINPADIRIDT 183

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           YRASGAGGQHVN TDSAVRITH P+G+VV CQ+ERSQ  N+  A  ML++KL ELEL+K+
Sbjct: 184 YRASGAGGQHVNMTDSAVRITHFPSGIVVTCQKERSQLSNRETAMKMLKSKLLELELKKK 243

Query: 293 EEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           EE     +  +++IGWG QIRSYV QPY +VKD RTN E  +   V+DG +DDF+ + L 
Sbjct: 244 EEEMKKIQGEQSDIGWGNQIRSYVFQPYALVKDHRTNTEIGNVKAVMDGSIDDFINSYLR 303

Query: 353 IKK 355
             K
Sbjct: 304 WIK 306


>gi|150002702|ref|YP_001297446.1| peptide chain release factor 1 [Bacteroides vulgatus ATCC 8482]
 gi|254882204|ref|ZP_05254914.1| peptide chain release factor 1 [Bacteroides sp. 4_3_47FAA]
 gi|294776956|ref|ZP_06742417.1| peptide chain release factor 1 [Bacteroides vulgatus PC510]
 gi|319643236|ref|ZP_07997864.1| peptide chain release factor 1 [Bacteroides sp. 3_1_40A]
 gi|149931126|gb|ABR37824.1| peptide chain release factor 1 [Bacteroides vulgatus ATCC 8482]
 gi|254834997|gb|EET15306.1| peptide chain release factor 1 [Bacteroides sp. 4_3_47FAA]
 gi|294449204|gb|EFG17743.1| peptide chain release factor 1 [Bacteroides vulgatus PC510]
 gi|317385140|gb|EFV66091.1| peptide chain release factor 1 [Bacteroides sp. 3_1_40A]
          Length = 371

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 94/354 (26%), Positives = 163/354 (46%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   ++T   DP++  +      L +E + L++ +   +E    L       ++
Sbjct: 12  LDGLVARFEEVSTLITDPNVIADQKRYVKLTKEYKDLNDIMKARREYIQCLNGLEEAKQI 71

Query: 76  ALEEDDCSILQETSDNLQRIK----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   +     +       E  +   + +   D  +A LE+  G GG E+ 
Sbjct: 72  MTNESDPEMKEMAREEANLCEVRIPELEEEIKLLLVPADPQDDRNAILEIRGGTGGDEAA 131

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++ E + ++ E    ++G   G K     + G   YG LK E GVHR+ 
Sbjct: 132 IFAGDLFRMYSKYCETKGWRLEVSSANEGAAGGFKEIICSVTGDKVYGTLKYESGVHRVQ 191

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P  +      I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 192 RVPATETQGRVHTSAASVAVLPEAEPFDVE-INEGEIKWDTFRSGGAGGQNVNKVESGVR 250

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +            ++++C + R Q KNK +A + LR  +Y+ E QK   I +I    K
Sbjct: 251 LRYNWKNPNTGIVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRK 308

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T +  G +   IR+Y   P   + D R N    + +  +DGD+ D +      +
Sbjct: 309 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLTVAE 361


>gi|298373047|ref|ZP_06983037.1| peptide chain release factor 1 [Bacteroidetes oral taxon 274 str.
           F0058]
 gi|298275951|gb|EFI17502.1| peptide chain release factor 1 [Bacteroidetes oral taxon 274 str.
           F0058]
          Length = 360

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 164/346 (47%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    +   ++T   DP +  +      L +E   L+  I    E    L +     +L
Sbjct: 9   LDGLSSKFDEISTLITDPAIIADTKRFVKLNKEYADLEKIIKKRDEYSLLLKNLQEATDL 68

Query: 76  ALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +           RI+   E  +   + +   D  +A +E+  G GG E+ 
Sbjct: 69  LATEKDEELREMARQEIDAVTPRIEPLEEEIKLLLVPADPQDGKNAIVEIRGGTGGDEAA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MY R+ E R +KTE     +G   G K     + G N YG LK E GVHR+ 
Sbjct: 129 IFAGDLFKMYARYCESRGWKTEVTSFTEGTMGGYKEIIFSVSGDNVYGTLKYESGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P  ++     I ESD R D + ASG GGQ VNTT SA+R
Sbjct: 189 RVPATESQGRVHTSAATVAVLPEAEEFDIE-IKESDIRTDIFCASGHGGQSVNTTYSAIR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           + HIPTG+ VQCQ E+SQ KNKA+A   LR ++Y +E QK   I +I    KT +  G +
Sbjct: 248 LVHIPTGITVQCQDEKSQLKNKAKAMTELRTRIYNIEYQKY--IDDIASKRKTMVSSGDR 305

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              IR+Y   P   + D R N    +    + GD+ + +      +
Sbjct: 306 SAKIRTYNY-PQGRITDHRINYTAYNLPAFVGGDIQECIDQLTIAE 350


>gi|118464752|ref|YP_880755.1| peptide chain release factor 1 [Mycobacterium avium 104]
 gi|166223570|sp|A0QCW7|RF1_MYCA1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118166039|gb|ABK66936.1| peptide chain release factor 1 [Mycobacterium avium 104]
          Length = 357

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 112/332 (33%), Positives = 165/332 (49%), Gaps = 9/332 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L  +  DP L  N  EA+   R    L   +   +++     D     EL
Sbjct: 8   IDVLLAEHADLERRLSDPDLHSNPDEARKAGRRFARLAPIVGTYRKLMAAREDLETAREL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A ++D  +      ++                     D++D  LEV +G GG ES  +A 
Sbjct: 68  AADDDSFTAEVADLESRVAQLDTQLTDML--APRDSHDADDIVLEVKSGEGGEESALFAA 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190
            L RMY R+AE+  +    L+    +  G K ATL I+         +  +K E GVHR+
Sbjct: 126 DLARMYIRYAERHGWTVTVLDEITSDLGGYKDATLSIRSKGDSADGVWSRMKFEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + VYP  ++  E++I ESD RID +R+SG GGQ VNTTDSAV
Sbjct: 186 QRVPVTESQGRVHTSAAGVLVYPEPEEVAEVQIDESDLRIDVFRSSGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTGVVV CQ ERSQ +NKA+A  +L A+L  +  ++    A+   +S+   +   
Sbjct: 246 RITHLPTGVVVTCQNERSQLQNKARALQVLAARLQAMAEEQASAEASADRASQIRTVDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
            +IR+Y   P   + D R   +  +   VLDG
Sbjct: 306 ERIRTYNF-PENRITDHRIGFKAHNLDQVLDG 336


>gi|157828246|ref|YP_001494488.1| peptide chain release factor 2 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165932947|ref|YP_001649736.1| peptide chain release factor 2 [Rickettsia rickettsii str. Iowa]
 gi|157800727|gb|ABV75980.1| peptide chain release factor 2 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908034|gb|ABY72330.1| bacterial peptide chain release factor 2 (RF-2) [Rickettsia
           rickettsii str. Iowa]
          Length = 285

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 166/279 (59%), Positives = 211/279 (75%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A  E+D   L +   +L+ + +     + E L SGEAD N+ +LE++AGAGGTES DWA
Sbjct: 1   MAEAENDLETLSQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEINAGAGGTESHDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           ++++RMY R+AE+  FKTE + + +GEEAGIKS T+ I G  AYGW K E GVHRLVRIS
Sbjct: 61  SIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTEAGVHRLVRIS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+++  +R TSF+S W+YP +DD+I I I + D RIDT+RASGAGGQHVNTTDSAVRITH
Sbjct: 121 PFNAAGKRMTSFASSWIYPEIDDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           IPTG V QCQ +RSQHKNKAQA  ML+AKLYELE+QKR +  N   ++KT+  WG QIRS
Sbjct: 181 IPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWGHQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           YVLQPYQMVKDLRT+ E +    VLDGDL++F+ A LA+
Sbjct: 241 YVLQPYQMVKDLRTDYETSDTKGVLDGDLEEFVSANLAM 279


>gi|68249758|ref|YP_248870.1| peptide chain release factor 2 [Haemophilus influenzae 86-028NP]
 gi|68057957|gb|AAX88210.1| peptide chain release factor 2 [Haemophilus influenzae 86-028NP]
 gi|301169953|emb|CBW29557.1| peptide chain release factor 2 [Haemophilus influenzae 10810]
          Length = 283

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 161/282 (57%), Positives = 210/282 (74%), Gaps = 1/282 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +LELA+E +D     E    L  ++ ++E  +F  + SGE D+ D Y+++ AG+GGTE+Q
Sbjct: 1   MLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQ 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G  A+GWL+ E G+HRLV
Sbjct: 61  DWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETGIHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 121 RKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+       E +K++IGWG Q
Sbjct: 181 ITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGWGSQ 240

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 241 IRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 281


>gi|254229664|ref|ZP_04923074.1| Protein chain release factor B [Vibrio sp. Ex25]
 gi|151937785|gb|EDN56633.1| Protein chain release factor B [Vibrio sp. Ex25]
          Length = 248

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 153/246 (62%), Positives = 191/246 (77%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ DS+D Y+++ AG+GGTE+QDW NMLLRMY RWAE + FK E +E+ +GE AG+K
Sbjct: 1   MFSGDHDSSDCYIDLQAGSGGTEAQDWTNMLLRMYLRWAEAKGFKAEVIEVSEGEVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP +D++I+I+I+ S
Sbjct: 61  SATVRISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEIDENIDIDINPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+E
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LELQK+       E +K++IGWG QIRSYVL     +KDLRT IE  +   VLDGDLD F
Sbjct: 181 LELQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDKF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|144897745|emb|CAM74609.1| peptide chain release factor RF-1 [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 352

 Score =  211 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 114/345 (33%), Positives = 179/345 (51%), Gaps = 13/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   L  +        +      L +E   ++  +  ++ ++    D      +
Sbjct: 7   LDKVLYRYDELREQLAAG----DGGSFARLSKEFSDIEPVVHAVQALKKARADMAEAEAM 62

Query: 76  ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   +  E    L+          Q   L   EAD  +A LEV AG GG E+  +A
Sbjct: 63  MADPDMKDLAAEEYYALKETLPGLERDVQLMLLPKDEADEKNAILEVRAGTGGEEAALFA 122

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+A  R ++ E +++++    G+K A+  I G   +  LK E GVHR+ R+ 
Sbjct: 123 AELFRMYERYASVRGWRFEVMDVNETGIGGMKEASATITGRGVFARLKFESGVHRVQRVP 182

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ + P   + ++I+I + D R D YR+ G+GGQ VNTTDSAVR+TH
Sbjct: 183 ATESGGRIHTSAATVAIMP-EAEEVDIQIDDKDLRFDVYRSQGSGGQSVNTTDSAVRVTH 241

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+ V CQQE+SQHKNKA A  +LRA+LY  E+++  + A    + K+++G G    +
Sbjct: 242 IPTGLAVACQQEKSQHKNKATAMKLLRARLY--EMERASKAAERAANRKSQVGSGDRSER 299

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIKK 355
           IR+Y   P   V D R N+      D+++G  LD+   A +A  +
Sbjct: 300 IRTYNF-PQGRVTDHRINLTLYKIDDMMNGTALDEVADALIAADQ 343


>gi|90420193|ref|ZP_01228101.1| peptide chain release factor 1 [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90335527|gb|EAS49277.1| peptide chain release factor 1 [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 359

 Score =  211 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 114/349 (32%), Positives = 180/349 (51%), Gaps = 18/349 (5%)

Query: 16  WDNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
            D  + R + L  +    P           L  E   L+  ++ I+  Q    +      
Sbjct: 9   LDEILNRFALLEHEMSKGPE----HEVYTKLAAEYSGLEEVVAAIRTYQKAEQELAEARA 64

Query: 75  LALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           +  E      ++E ++       E         +   L    AD   A LE+ AG GG+E
Sbjct: 65  ILDEPAAGRDMRELAEIEIDELKEQLETLTAEIRILLLPKDAADEKGAILEIRAGTGGSE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY R+AE  ++K E +   +GE  G +     I+G   +  LK E GVHR
Sbjct: 125 AGLFAGDLFRMYQRYAEMNRWKVEIISASEGEVGGYREVIAAIRGVGVFSRLKFESGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P   + I++E+   D RIDT RASGAGGQHVNTTDSA
Sbjct: 185 VQRVPETESGGRIHTSAATVAVLP-EAEDIDVEVKTEDIRIDTMRASGAGGQHVNTTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG+VV    E+SQH+N+A+A  +L+A+L+++E Q+ ++  +     K+++G G
Sbjct: 244 VRITHLPTGIVVTSS-EKSQHQNRARAMQVLKARLFDMERQRADDERSAA--RKSQVGSG 300

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       V++G++D+ + A +A  +
Sbjct: 301 DRSERIRTYNF-PQGRVTDHRINLTLYKLDRVIEGEMDELVDALIADHQ 348


>gi|331695519|ref|YP_004331758.1| peptide chain release factor 1 [Pseudonocardia dioxanivorans
           CB1190]
 gi|326950208|gb|AEA23905.1| Peptide chain release factor 1 [Pseudonocardia dioxanivorans
           CB1190]
          Length = 366

 Score =  211 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 116/346 (33%), Positives = 173/346 (50%), Gaps = 10/346 (2%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D  +   + L     DP +  +   A+ L R    +   ++  KE+     D     ELA
Sbjct: 13  DALLAEHADLELMLADPAVHADPARARRLGRRYAEIGPVVAVAKELASVRDDLAAARELA 72

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
            ++       +              +    +     D++D  LEV +G GG ES  +A  
Sbjct: 73  ADDPTFGAEADDLAARVPALEARLAELL--VPRDPHDADDVVLEVKSGEGGEESALFAGD 130

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRLV 191
           L+RMYTR+AE R + TE L+    +  G K  TL ++         +  LK E GVHR+ 
Sbjct: 131 LVRMYTRFAESRGWSTEILDATTSDLGGYKDVTLSVRARVPAADGVWSALKFEGGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIE-IEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           R+   +S  R HTS + + VYP        IEI ++D R+D +R+SG GGQ VNTTDSAV
Sbjct: 191 RVPVTESQGRIHTSAAGVLVYPDTGADDAGIEIDDNDLRVDVFRSSGHGGQSVNTTDSAV 250

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG+VV CQ ERSQ +N+A+A  +LR++L  L  ++    A+    S+   +   
Sbjct: 251 RITHLPTGIVVSCQNERSQLQNRARAMEVLRSRLQALAEEEAAARASDARRSQVRTVDRS 310

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R   +  + S VLDGDL D + A +A  +
Sbjct: 311 ERIRTYNF-PENRIADHRVGYKAHNLSAVLDGDLGDVIAALVAADR 355


>gi|116513791|ref|YP_812697.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|313123397|ref|YP_004033656.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|122275439|sp|Q04BB3|RF1_LACDB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116093106|gb|ABJ58259.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
 gi|312279960|gb|ADQ60679.1| Peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|325125449|gb|ADY84779.1| Peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
 gi|325684404|gb|EGD26572.1| peptide chain release factor RF1 [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 361

 Score =  211 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 92/342 (26%), Positives = 165/342 (48%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   R   +     DP +  +      + +E   +   +   ++ +    +     E+
Sbjct: 8   LESLEVRYEEIQEMMADPEVIADTKRYMEITKEEADMREVVQKFRKFKADKEEIAGNKEI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  +++        ++ E+   +       L     D  D  +E+   AGG E+ 
Sbjct: 68  IADGSDPELVEMAKMENSELEDEISQLEDEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE + +    ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAENQGWNVSIVDSEQTEVGGYKRVAIMITGNKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + ++I++   + R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESAGRVHTSTATVAVMP-EYEQVDIDLDPKEIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q +RSQ +N+A+A  +L++++Y+    +  +        K  +G G  
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQNRD--KYDAKRKNAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   V D R  +       +++G+LD+ + A 
Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEVIDAL 345


>gi|329124057|ref|ZP_08252604.1| peptide chain release factor RF2 [Haemophilus aegyptius ATCC 11116]
 gi|327467482|gb|EGF12980.1| peptide chain release factor RF2 [Haemophilus aegyptius ATCC 11116]
          Length = 283

 Score =  211 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 160/282 (56%), Positives = 211/282 (74%), Gaps = 1/282 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +LELA+E +D     E    L  ++ ++E  +F  + SGE D+ + Y+++ AG+GGTE+Q
Sbjct: 1   MLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACNCYVDLQAGSGGTEAQ 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ + G  A+GWL+ E G+HRLV
Sbjct: 61  DWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETGIHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID YRASGAGGQHVN T+SAVR
Sbjct: 121 RKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK+     + E +K++IGWG Q
Sbjct: 181 ITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQVMEDNKSDIGWGSQ 240

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IRSYVL     +KDLRT +E  +   VLDGDLD F++A+L  
Sbjct: 241 IRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASLKA 281


>gi|308177036|ref|YP_003916442.1| peptide chain release factor 1 [Arthrobacter arilaitensis Re117]
 gi|307744499|emb|CBT75471.1| peptide chain release factor 1 [Arthrobacter arilaitensis Re117]
          Length = 357

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 108/350 (30%), Positives = 179/350 (51%), Gaps = 11/350 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+   + ++  + +  +  DP ++ +   A+ L R    L+  +    + Q    D   
Sbjct: 1   MFESVKSLLEEHAAIQAQLSDPAVYADQALARKLGRRSAQLNGIVEAYNKWQTATDDLEA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E+A E+ D +   +          E   +    +   E D  +  LEV  G GG E+ 
Sbjct: 61  AQEMADEDPDFAEEVQALTEELPQLEEKLRRLL--IPRDENDGRNVILEVKGGEGGDEAA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI------KGPNAYGWLKGEQ 185
            +A  LLRMYTR+AE + +K E +  ++ +  G K A + I           Y  LK E 
Sbjct: 119 LFAADLLRMYTRFAEHKGWKVEMISFNESDLGGYKDAQVAIKGNSNDPAEGVYAQLKFEG 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS + + V P VD+  E++I ++D +ID YR+SG GGQ VNT
Sbjct: 179 GVHRVQRVPVTESQGRIHTSAAGVLVLPEVDEPEEVDIHQNDLKIDVYRSSGPGGQSVNT 238

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PTG+VV  Q E+SQ +N+  A  +LR++L   + +  ++  +   +S+  
Sbjct: 239 TDSAVRITHLPTGIVVAMQNEKSQIQNREAAMRVLRSRLLAHQQEIIDKENSAQRASQIR 298

Query: 306 -IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +    +IR+Y   P   + D RT  +  +   V+DGDL   +++ + + 
Sbjct: 299 TMDRSERIRTYNY-PENRIADHRTGYKAYNLDAVMDGDLQPVVESCIQMD 347


>gi|298209284|ref|YP_003717463.1| peptide chain release factor 1 [Croceibacter atlanticus HTCC2559]
 gi|83849211|gb|EAP87080.1| peptide chain release factor 1 [Croceibacter atlanticus HTCC2559]
          Length = 358

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 97/342 (28%), Positives = 167/342 (48%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72
            +   QR   ++     P +  +      L +E + L   +   +      +R+ +   +
Sbjct: 5   LNIVKQRFDEISDLIIQPDIISDQKRYVELTKEYKDLKKLMDERENYIRVTNRIEEAEEI 64

Query: 73  LELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +    + +   + +   D  +       +  +   +     DS +A +EV AG GG E+ 
Sbjct: 65  IADGSDPEMSEMAKMQLDEAKSELPALDDKIRMMLIPKDPEDSKNAVVEVRAGTGGDEAS 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  + RM T++ E + +    ++  +G   G K     + G + YG LK E GVHR+ 
Sbjct: 125 IFAGDIYRMLTKFCESKGWNCSTVDFSEGTSGGFKEIQFEVSGDDVYGTLKYEAGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V+P  ++     I   D RID + +SG GGQ VNTT SAVR
Sbjct: 185 RVPQTETQGRVHTSAATVMVFPEAEEFDVE-IDPKDVRIDYFCSSGPGGQSVNTTYSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +TH PTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL K++E         + +  G +
Sbjct: 244 LTHEPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDLELAKKQEEDAAKRG--SMVTSGDR 301

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              IR+Y       V D R N+      +++DGD+   +   
Sbjct: 302 SAKIRTYNYA-QGRVTDHRINLTIYDLQNIIDGDIQRIIDEL 342


>gi|163735803|ref|ZP_02143232.1| peptide chain release factor 1 [Roseobacter litoralis Och 149]
 gi|161390889|gb|EDQ15229.1| peptide chain release factor 1 [Roseobacter litoralis Och 149]
          Length = 351

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 174/344 (50%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +R  +L           ++     L +E   L   +  I   Q  L D     E+
Sbjct: 7   LRQITERFQYLEAAMSTGDGGGDIA---TLAKEYSDLRPVVEQISAYQQLLNDLEDAAEM 63

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E    L+          Q   L   +AD+  A LE+  G GG E+  +A
Sbjct: 64  LGDPDMAPLAEEEIPRLKSALPQAEAALQLALLPKDKADAKPAMLEIRPGTGGDEAALFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+AE + +K + +E+ + E  GIK     IKG + +  LK E GVHR+ R+ 
Sbjct: 124 GDLFRMYQRYAETQGWKVDVIELQETELGGIKEVVAHIKGADVFARLKYESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++I I  +D RIDT R+SGAGGQHVNTTDSAVRITH
Sbjct: 184 STESGGRIHTSAATVAVLP-EAEDVDIHIEANDLRIDTMRSSGAGGQHVNTTDSAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV    E+SQH+N+  A  +L+A+LY+LE  + ++          ++G G    +
Sbjct: 243 LPTGLVVTSS-EKSQHRNREIAMQVLKARLYDLERSRVDDER--SADRAAQVGSGDRSER 299

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       +L GDLD+ + A  A  +
Sbjct: 300 IRTYNF-PQGRMTDHRINLTLYRLDAILQGDLDEIIDALTAHAQ 342


>gi|306825267|ref|ZP_07458609.1| peptide chain release factor RF1 [Streptococcus sp. oral taxon 071
           str. 73H25AP]
 gi|304432703|gb|EFM35677.1| peptide chain release factor RF1 [Streptococcus sp. oral taxon 071
           str. 73H25AP]
          Length = 359

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 161/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E       +    QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGHSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|325856854|ref|ZP_08172352.1| peptide chain release factor 1 [Prevotella denticola CRIS 18C-A]
 gi|327314543|ref|YP_004329980.1| peptide chain release factor 1 [Prevotella denticola F0289]
 gi|325483227|gb|EGC86204.1| peptide chain release factor 1 [Prevotella denticola CRIS 18C-A]
 gi|326945459|gb|AEA21344.1| peptide chain release factor 1 [Prevotella denticola F0289]
          Length = 370

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 92/354 (25%), Positives = 157/354 (44%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   ++T   DP +  +      L +E + L + +   +   + L       ++
Sbjct: 11  LDGLEARYEEVSTLITDPSVIADQKRYVKLTKEYKDLGDIMDARRRYVNCLTTIKEAKDI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L   +      +       +     D  +  +E+  GAGG E+ 
Sbjct: 71  IANESDAEMKEMAREELSENEELQPKIEEEIKLLLVPKDPEDGKNVQMEIRGGAGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY R+ +K+ +K     + +G   G K     ++G N YG LK E GVHR+ 
Sbjct: 131 LFAGDLFNMYKRYCDKKGWKLSVTSVSEGAVGGFKEIDFAVEGENVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P  D      I+E D + DT+R+SGAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRMHTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKVESGVR 249

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +            ++++C + R Q KNK +A + L   +Y+ E QK   I +I    K
Sbjct: 250 LRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTYIYDHEHQKY--IDDIASRRK 307

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T +  G +   IR+Y   P   V D R           ++GD+ + + A    +
Sbjct: 308 TLVSTGDRSAKIRTYNF-PQGRVTDHRIGFTTHDLQGFMNGDIQEMIDALTVAE 360


>gi|83951817|ref|ZP_00960549.1| peptide chain release factor 1 [Roseovarius nubinhibens ISM]
 gi|83836823|gb|EAP76120.1| peptide chain release factor 1 [Roseovarius nubinhibens ISM]
          Length = 349

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 120/339 (35%), Positives = 176/339 (51%), Gaps = 14/339 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +QR  F+  +        ++ +   L RE   L   +  I+  +  L        +
Sbjct: 7   LDQILQRFEFIEAQMSAGS--GDIAQ---LGREYAELRPVVEEIRAYRAALDAAEQAEAM 61

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + ++    L+      E   Q   L   EAD+  A +E+  G GG E+  +A
Sbjct: 62  LGDPEMRELAEDELRTLKAELPGREKALQLALLPKDEADARPAIIEIRPGTGGEEAALFA 121

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE R ++ E +E    E  GIK A + +KG + +  LK E GVHR+ R+ 
Sbjct: 122 GDLLRMYARYAEARGWQFEVIEEAQTELGGIKEAVVHVKGAHVFARLKYESGVHRVQRVP 181

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++I I  SD RIDT RASGAGGQHVNTTDSAVRITH
Sbjct: 182 ETESGGRIHTSAATVAVLP-EAEDVDIHIDPSDIRIDTMRASGAGGQHVNTTDSAVRITH 240

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IP+G+VV    E+SQH+N+  A  +L+ +LY+LE QK  +          ++G G    +
Sbjct: 241 IPSGIVVTSS-EKSQHRNREIAMQVLKTRLYDLERQKVHDAR--SADRAAQVGSGDRSER 297

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   + D R N+       V+ GDLDD + A 
Sbjct: 298 IRTYNF-PQGRMTDHRINLTLYKLDQVMAGDLDDIIDAL 335


>gi|104773785|ref|YP_618765.1| peptide chain release factor 1 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|119361552|sp|Q1GAX5|RF1_LACDA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|103422866|emb|CAI97528.1| Peptide chain release factor 1 (RF-1) [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
          Length = 361

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 93/342 (27%), Positives = 166/342 (48%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   R   +     DP +  +      + +E   +   +   ++ +    +     E+
Sbjct: 8   LESLEVRYEEIQEMMADPEVIADTKRYMEITKEEADMREVVQKFRKFKADKEEIAGNKEI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  +++        ++ E+   +       L     D  D  +E+   AGG E+ 
Sbjct: 68  IADGSDPELVEMAKMENSELEDEISQLEDEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE + +    ++    E  G K A ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAENQGWNVSIVDSEQTEVGGYKRAAIMITGNKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + ++I++   + R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESAGRVHTSTATVAVMP-EYEQVDIDLDPKEIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q +RSQ +N+A+A  +L++++Y+    +  +        K  +G G  
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNRAKAMEILKSRVYDYYESQNRD--KYDAKRKNAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   V D R  +       +++G+LD+ + A 
Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELDEVIDAL 345


>gi|163743155|ref|ZP_02150537.1| peptide chain release factor 1 [Phaeobacter gallaeciensis 2.10]
 gi|161383572|gb|EDQ07959.1| peptide chain release factor 1 [Phaeobacter gallaeciensis 2.10]
          Length = 351

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 173/344 (50%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +QR  +L     +     ++     L +E   L      I   +  L D     ++
Sbjct: 7   LEQILQRFQYLEAAMAEGVAGADIA---ALAKEYSDLRPVAEQISAYRRLLSDLEEAEQM 63

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E    L+          Q   L   EAD+  A LE+  G GG E+  +A
Sbjct: 64  LADPDMAELAEEELPQLRAALPEAEHALQLALLPRDEADARPAMLEIRPGTGGDEAALFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE R +  E +E    E  G+K     +KG N +  LK E GVHR+ R+ 
Sbjct: 124 GDLLRMYQRYAEARGWGIEIIEEQTTELGGLKEVVAHVKGENVFARLKYESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + +++ I   D RIDT RASGAGGQHVNTTDSAVRITH
Sbjct: 184 VTESGGRIHTSAATVAVLP-EAEDVDLRIDPGDLRIDTMRASGAGGQHVNTTDSAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG++V    E+SQH+N+  A  ++R +LY+LE Q+ +          +++G G    +
Sbjct: 243 IPTGIIV-VSSEKSQHRNREIAMQVMRTRLYDLERQRIDSER--SADRASQVGSGDRSER 299

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++ GDLD+ + A  A  +
Sbjct: 300 IRTYNF-PQGRMSDHRINLTLYKLDQIMQGDLDEIIDALTADDQ 342


>gi|329939826|ref|ZP_08289127.1| peptide chain release factor 1 [Streptomyces griseoaurantiacus
           M045]
 gi|329301396|gb|EGG45291.1| peptide chain release factor 1 [Streptomyces griseoaurantiacus
           M045]
          Length = 361

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 118/353 (33%), Positives = 177/353 (50%), Gaps = 19/353 (5%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +  V   + L  K  DP +  +   A+ L +    L   ++  +  +    D   
Sbjct: 1   MFEAVEELVGEHADLEKKLADPAVHADQANARRLNKRYAELTPIVATYRSWKRTGDDLGT 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E     DD   + E  +  Q+ +   E  +   +    +D  D  LE+ AGAGG ES 
Sbjct: 61  AREF--AADDPDFVAEVKELEQQREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-------------AY 178
            +A  LLRMY R+AE+  +KTE ++  + E  G K   + +K                 +
Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDATESELGGYKDVQVAVKTKPHGVSQGATEPGQGVW 178

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             LK E GVHR+ R+   +S  R HTS + + V P   + +++EI+ SD RID YR+SG 
Sbjct: 179 ARLKYEGGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEVDVEINPSDLRIDVYRSSGP 237

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR++L     ++ E+ A  
Sbjct: 238 GGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRSRLLAAAQEEAEKEAAD 297

Query: 299 GESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              S+   +    +IR+Y   P   + D R   +  +   VLDGDLD  ++A 
Sbjct: 298 ARRSQVRTVDRSEKIRTYNY-PENRISDHRVGFKAYNLDQVLDGDLDAVIQAC 349


>gi|306840415|ref|ZP_07473178.1| peptide chain release factor 2 [Brucella sp. BO2]
 gi|306289615|gb|EFM60824.1| peptide chain release factor 2 [Brucella sp. BO2]
          Length = 292

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 192/280 (68%), Positives = 238/280 (85%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +  EE D SI+++    ++ +K E++ +Q + LLSGEAD+ND YLEVHAGAGGTESQDWA
Sbjct: 1   MGEEEGDKSIVEDAEKTIRDLKDEIDRRQIDMLLSGEADANDTYLEVHAGAGGTESQDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           +MLLRMYTRWAE+   K E +E+H+GEEAGIKSAT+L+KG N+YG LK E GVHRLVRIS
Sbjct: 61  SMLLRMYTRWAERNGRKVEVMEVHEGEEAGIKSATILVKGHNSYGMLKTESGVHRLVRIS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           PYDSN+RRHTSF+SIWVYPV+DD+IE++++E+D RIDTYRASGAGGQHVNTTDSAVRITH
Sbjct: 121 PYDSNARRHTSFASIWVYPVIDDNIEVQVTEADVRIDTYRASGAGGQHVNTTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           I TG+VVQCQ ERSQHKN+ +AW+MLRA+LYE EL+KREE  +   ++KT+IGWG QIRS
Sbjct: 181 IATGIVVQCQAERSQHKNREKAWSMLRARLYEEELKKREEATDAANATKTDIGWGHQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           YVLQPYQ+VKDLRT +E T+P +VLDG +  FM+A LA +
Sbjct: 241 YVLQPYQLVKDLRTGVESTNPQEVLDGAVTPFMEAALAHR 280


>gi|301165960|emb|CBW25534.1| peptide chain release factor 1 [Bacteriovorax marinus SJ]
          Length = 357

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 113/352 (32%), Positives = 176/352 (50%), Gaps = 13/352 (3%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            +FD  D  ++R   L  K  DP ++    E K +  ER +L+  +   KE +    D  
Sbjct: 2   SMFDKLDAVIERFETLTEKLADPTIYDRQDEFKKISSERSNLEEVVVAYKEYRQMKEDID 61

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAG 126
              E+   E D  + +   + +   + ++   +       L     D  +  +E+ AGAG
Sbjct: 62  EAKEILKNEKDEDMKEMAKEVIAENEPQIPEMEERLTILLLPKDPLDDKNVMMEIRAGAG 121

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +   + RMY+ +     FK E + I +G+E GIK     + G   Y  LK E G
Sbjct: 122 GDEASIFVGDVYRMYSNYFRDLGFKVEQVSISEGDE-GIKEIIFSVSGEKVYSKLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS  ++ V P   D +E ++  +D RID YR+ GAGGQ VNTT
Sbjct: 181 VHRVQRVPKTESQGRVHTSTITVAVMP-ETDDVEFDLDMNDVRIDVYRSGGAGGQSVNTT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVR+THIPTG VV  Q ++SQ KNK +A  +L+ ++Y+  LQ++   A      K  +
Sbjct: 240 DSAVRVTHIPTGTVVANQDQKSQLKNKEKALRILKNRIYDKMLQEKN--AAEAAERKGLV 297

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   + D R  +   S   +++GD+     A +A  +
Sbjct: 298 GTGDRSERIRTYNF-PQGRLTDHRIGLTLYSLDKIIEGDMTPVTDALIAHNQ 348


>gi|329957131|ref|ZP_08297698.1| peptide chain release factor 1 [Bacteroides clarus YIT 12056]
 gi|328523399|gb|EGF50498.1| peptide chain release factor 1 [Bacteroides clarus YIT 12056]
          Length = 370

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 100/354 (28%), Positives = 169/354 (47%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   ++T   DP +  +      L +E + L + ++  KE    L       E+
Sbjct: 11  LEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMNARKEYMQVLSGIEEAKEI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L   +      + E     + +   DS +A LE+  GAGG E+ 
Sbjct: 71  IANETDAEMREMAREELDACQARQPELEEEIKLLLVPADPQDSRNAILEIRGGAGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYT++ E + +K +    ++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 IFAGDLFRMYTKYCETKGWKLDISSANEGAAGGFKEIICSVTGDNVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P  ++   + I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +            ++++C + R Q KNK +A + LR  +Y+ E QK   I +I    K
Sbjct: 250 LRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRK 307

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T +  G +   IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360


>gi|327404087|ref|YP_004344925.1| peptide chain release factor 1 (bRF-1) [Fluviicola taffensis DSM
           16823]
 gi|327319595|gb|AEA44087.1| bacterial peptide chain release factor 1 (bRF-1) [Fluviicola
           taffensis DSM 16823]
          Length = 359

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 105/346 (30%), Positives = 173/346 (50%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   +     DP +  ++     L +E + L+   +  K  ++ L +     E+
Sbjct: 8   LEAIHFRFIEVGKMITDPEIISDMERYVKLNKEYRDLEEVDAAYKSYKNVLDNLKSSKEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +     +  ++ +    + E           D  +A +E+ AG GG E+ 
Sbjct: 68  LEVETDPEMREMAKMEINELEQQRPIIEEEIKVLLIPKDPEDDKNAIIELRAGTGGDEAC 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   + RMYT + ++  +  E +   +G   G K  ++ I G   YG LK E GVHR+ 
Sbjct: 128 IFVEDIYRMYTMYFKEMGWAYEIVNSSEGSAKGYKEVSMSISGAGIYGMLKFESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P   + ++ E+  +D R DT+RASGAGGQH+N T+SA+R
Sbjct: 188 RVPETESQGRVHTSAITVAVLP-EAEEVDFELDMNDVRKDTFRASGAGGQHINKTESAIR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +THIPTG VV+CQ  RSQHKN AQA ++LR++LY+ EL +  +        KT +  G +
Sbjct: 247 LTHIPTGTVVECQDGRSQHKNLAQAISVLRSRLYQAELDRVHQERAAH--RKTLVSTGDR 304

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              IR+Y   P   + D R N    + S  ++GD+ + + A    +
Sbjct: 305 SAKIRTYNY-PQGRITDHRINKTIYNLSAFMNGDVQEMIDALKMAE 349


>gi|223039191|ref|ZP_03609481.1| peptide chain release factor 1 [Campylobacter rectus RM3267]
 gi|222879552|gb|EEF14643.1| peptide chain release factor 1 [Campylobacter rectus RM3267]
          Length = 355

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 117/340 (34%), Positives = 176/340 (51%), Gaps = 9/340 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
            R   L+    DP +  ++     L +E+ +L++  S  K     L D      L  + +
Sbjct: 11  DRYDELSRLLSDPSITSDIANMTKLSKEQSNLEDIASAAKSYLQTLADIEENKALLDDAE 70

Query: 81  DCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
              + ++   NL+  K    E  +   L     D  + +LE+ AG GG E+  +A  L  
Sbjct: 71  LGELAKDELKNLESQKENLEEEIKILLLPKDPNDDKNVFLEIRAGTGGDEAALFAGDLFN 130

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
            Y R+AE R +K E +   +G   G K   LLIKG  AY  LK E G HR+ R+   +S 
Sbjct: 131 AYARYAELRGYKFEIVSQSEGNTGGFKEIILLIKGKGAYSRLKFEGGTHRVQRVPETESQ 190

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ + P V+DS    I+ +D RID  R+SG GGQ VNTTDSAVRITHIPTG+
Sbjct: 191 GRVHTSAVTVAIMPEVEDSEIE-INPNDLRIDVMRSSGHGGQSVNTTDSAVRITHIPTGI 249

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYV 316
           VV  Q  +SQHKNK  A  +L+A+LYE++ ++R  +A      K+++G G    +IR+Y 
Sbjct: 250 VVTNQDGKSQHKNKEAAMKVLKARLYEIQEEER--VAKETSERKSQVGTGDRSGRIRTYN 307

Query: 317 LQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
             P   + D R N+       ++  G  D+ ++  +A  +
Sbjct: 308 F-PQNRISDHRINLTLYRLDAIMAAGLFDEIIEPLIAHYQ 346


>gi|308810022|ref|XP_003082320.1| COG0216: Protein chain release factor A (ISS) [Ostreococcus tauri]
 gi|116060788|emb|CAL57266.1| COG0216: Protein chain release factor A (ISS) [Ostreococcus tauri]
          Length = 1699

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 96/348 (27%), Positives = 167/348 (47%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +  + LN +  DP +  +  E + L +    L+  +      +  + +      +
Sbjct: 59  LEATAKTHAELNERMADPEVTSDPKEFQRLSKACGELNYVVDLYARYRACVDEIEEARAM 118

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130
             +      +   +        E   K  E +          D  +  LE+ AG GG E+
Sbjct: 119 VKDAAGDEEMVAMAREEIDALTEESDKLVEDMTLALLPKDPLDEKNIMLEIRAGTGGDEA 178

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+AE+  ++   +  +  +  G K     IKG + Y  LK E GVHR+
Sbjct: 179 GIWAGDLYRMYMRFAEREGWQATVVTSNTADAGGFKEIVAEIKGADVYSNLKWEAGVHRV 238

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R  TS +++ + P   D +E++I E D  I T R+ GAGGQ+VN  ++A+
Sbjct: 239 QRVPATETQGRIQTSTATVAIMP-EVDEVEVQIDEKDLDISTARSGGAGGQNVNKVETAI 297

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C +ER+Q KN+ +A  +LRAKL+E++L++++    I +  K+++G G 
Sbjct: 298 DLMHKPTGIRVFCTEERTQLKNRIRAMQILRAKLFEIQLEEQQ--KAISDKRKSQVGSGS 355

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R           LDGD+   + A  A+++
Sbjct: 356 RSEKIRTYNWKD-SRVSDHRIG-TNFPLQTFLDGDIKGAIGAMQALEQ 401


>gi|307942489|ref|ZP_07657838.1| peptide chain release factor 1 [Roseibium sp. TrichSKD4]
 gi|307774310|gb|EFO33522.1| peptide chain release factor 1 [Roseibium sp. TrichSKD4]
          Length = 359

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 120/346 (34%), Positives = 183/346 (52%), Gaps = 18/346 (5%)

Query: 16  WDNAVQRLSFLNTKTE-DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
            +  + R + L  +   +P    +      L RE   L+  +  I+ +     +      
Sbjct: 7   LNTLLDRFAELEHQMSANP----DPSTYVKLSREYSGLEPLVHKIRTLIKAEEELAEAEA 62

Query: 75  LALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           +  + D    ++E ++  +       +   +  +   L    AD+NDA LEV AG GG E
Sbjct: 63  MLDDADTDPEMRELAEAERDELAASLETLTQDVRIGLLPKDSADANDAILEVRAGTGGDE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY R+AE   +K E L   +GE  G K     + G N +  LK E GVHR
Sbjct: 123 AALFAGDLFRMYQRFAELNGWKVEVLSASEGEVGGFKEVIASVSGENVFARLKFESGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P   + ++IEI+ESD RIDT+RASGAGGQHVNTTDSA
Sbjct: 183 VQRVPATESGGRIHTSAATVAVLP-QAEDVDIEINESDLRIDTFRASGAGGQHVNTTDSA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH PTG+VV  Q ERSQHKNKA+A  +LRA++Y+   ++    +   E+ + ++G G
Sbjct: 242 VRITHEPTGIVVAVQDERSQHKNKARAMQLLRARIYD--EERARAASERTEARRVQVGSG 299

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
               +IR+Y   P   V D R  +       ++ G+ L + ++A +
Sbjct: 300 DRSERIRTYNF-PQGRVTDHRIGLTLYKLEQIIAGEGLAEVVEALI 344


>gi|146283094|ref|YP_001173247.1| peptide chain release factor 1 [Pseudomonas stutzeri A1501]
 gi|145571299|gb|ABP80405.1| peptide chain release factor 1 [Pseudomonas stutzeri A1501]
          Length = 270

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 157/269 (58%), Positives = 202/269 (75%), Gaps = 1/269 (0%)

Query: 85  LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           + +    ++R++  +E  +F  + S E D N+ YL++ AG+GGTE+QDWAN+LLRMY RW
Sbjct: 1   MNDIVAEVERLREILEKLEFRRMFSHEMDPNNCYLDIQAGSGGTEAQDWANILLRMYLRW 60

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           A+KR F  E +E+ +GE AGIK AT+ IKG  A+GWL+ E GVHRLVR SP+DS +RRHT
Sbjct: 61  ADKRGFSAEIVELSEGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGARRHT 120

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           SFS+++V P +DD +EIEI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ
Sbjct: 121 SFSAVFVSPEIDDKVEIEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQ 180

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
            ERSQH NK  A  MLRAKLYELE+QKR   +   E SK++IGWG QIRSYVL     +K
Sbjct: 181 NERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDSKSDIGWGHQIRSYVLDD-SRIK 239

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           DLRT +E++    VLDGDLD +++A+L  
Sbjct: 240 DLRTGVERSDCQKVLDGDLDGYLEASLKQ 268


>gi|113461617|ref|YP_719686.1| peptide chain release factor 2 [Haemophilus somnus 129PT]
 gi|112823660|gb|ABI25749.1| bacterial peptide chain release factor 2 (bRF-2) [Haemophilus
           somnus 129PT]
          Length = 260

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 149/259 (57%), Positives = 195/259 (75%), Gaps = 1/259 (0%)

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
           ++ ++   +F  + SG+ D+ D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE 
Sbjct: 1   MEKKLAALEFRRMFSGQHDNCDCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTEL 60

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E+  G+ AG+KSAT+ I G  A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP 
Sbjct: 61  VEVSSGDVAGLKSATIRIAGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPE 120

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           +DD IEIEI+ +D RID YRASGAGGQHVN T+SAVRITHIP+G+VVQCQ  RSQH+NK 
Sbjct: 121 IDDDIEIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNGRSQHQNKD 180

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           QA   L+AKLYE+E+ K+       E SK++IGWG QIRSYVL     +KDLRT +E  +
Sbjct: 181 QAMKQLKAKLYEMEIMKKNADKQAMEDSKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRN 239

Query: 335 PSDVLDGDLDDFMKATLAI 353
              VLDGDLD F++A+L  
Sbjct: 240 TQAVLDGDLDRFIEASLKA 258


>gi|167765221|ref|ZP_02437334.1| hypothetical protein BACSTE_03609 [Bacteroides stercoris ATCC
           43183]
 gi|167696849|gb|EDS13428.1| hypothetical protein BACSTE_03609 [Bacteroides stercoris ATCC
           43183]
          Length = 370

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 99/354 (27%), Positives = 169/354 (47%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   ++T   DP +  +      L +E + L + ++  KE    L       E+
Sbjct: 11  LEGLVARFEEVSTLITDPAVIADQKRYVKLTKEYKELGDLMNARKEYMQVLNGIEEAKEI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L   +      + E     + +   DS +A LE+  GAGG E+ 
Sbjct: 71  IANETDAEMREMAREELDACQARQPELEEEIKLLLVPADPQDSRNAILEIRGGAGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYT++ E + ++ +    ++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 IFAGDLFRMYTKYCEAKGWRLDISSANEGAAGGFKEIICSVTGDNVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P  ++   + I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +            ++++C + R Q KNK +A + LR  +Y+ E QK   I +I    K
Sbjct: 250 LRYNWKNPNTGVVEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDIASKRK 307

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T +  G +   IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360


>gi|254513973|ref|ZP_05126034.1| peptide chain release factor 2 [gamma proteobacterium NOR5-3]
 gi|219676216|gb|EED32581.1| peptide chain release factor 2 [gamma proteobacterium NOR5-3]
          Length = 280

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 152/278 (54%), Positives = 205/278 (73%), Gaps = 1/278 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A EE+D + + +    +Q +   +E  +F  + +GE D+N+A+L++ +G+GGTE+QDWA
Sbjct: 1   MASEENDEAAVSDLELEIQGLLKVLELLEFRRMFNGEMDANNAFLDIQSGSGGTEAQDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            MLLRMY RW E R F TE +E   G+ AGIKSAT+   G  A+GWL+ E GVHRLVR S
Sbjct: 61  EMLLRMYLRWGESRGFTTELIEASGGDVAGIKSATIKFSGEYAFGWLRTETGVHRLVRKS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DS +RRHTSF+S++V P +DD+IEIEI+ +D R+DTYRASGAGGQHVN TDSAVR+TH
Sbjct: 121 PFDSGNRRHTSFASVFVAPEIDDNIEIEINPADLRVDTYRASGAGGQHVNKTDSAVRLTH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
            P+G+VVQCQ ERSQH+N+  A  +LR KLYE+E+ KR     + E +K +IGWG QIRS
Sbjct: 181 NPSGIVVQCQTERSQHQNRDNAMKLLRGKLYEMEVLKRNAEKQVMEDNKADIGWGSQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           YVL     +KDLRTN+E ++   VLDG +D F++A+L 
Sbjct: 241 YVLD-ASRIKDLRTNVETSNTQAVLDGAIDQFIEASLK 277


>gi|13472970|ref|NP_104537.1| peptide chain release factor 1 [Mesorhizobium loti MAFF303099]
 gi|20139342|sp|Q98G93|RF1_RHILO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|14023718|dbj|BAB50323.1| peptide chain release factor 1 [Mesorhizobium loti MAFF303099]
          Length = 359

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 118/348 (33%), Positives = 188/348 (54%), Gaps = 18/348 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  V+R   L  +    P           +  E   L + ++ +++++    +   L  +
Sbjct: 10  DQVVKRFEMLEAQMSAGPA----PDAYVKMASEYAELQDMVAKVRQLRSAEHEQADLEAM 65

Query: 76  ALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             ++   + ++  ++       +RI+   +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 66  LADKGTDAEMRALAEADLPDVEERIEALQKDIQILLLPKDAADDKNAILEIRAGTGGDEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A +R ++ E +   DG+  G K     + G   +  LK E GVHR+
Sbjct: 126 ALFAGDLFRMYERYAAERGWRFETVSASDGDAGGFKEIIATVSGKGVFAHLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +++ R HTS +++ V P   + ++IEI   D RIDT RASG+GGQHVNTTDSAV
Sbjct: 186 QRVPATEASGRIHTSAATVAVLP-EAEEVDIEIRAEDIRIDTMRASGSGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG++V  Q E+SQH+N+A+A  +LRA+LY+LE  K +E     ES K+++G G 
Sbjct: 245 RITHLPTGIMV-VQAEKSQHQNRAKAMQILRARLYDLERSKADEER--SESRKSQVGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V+ G+LD+ + A +A  +
Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMMGELDEIVDALIADHQ 348


>gi|148981822|ref|ZP_01816539.1| bacterial peptide chain release factor 2 (RF-2) [Vibrionales
           bacterium SWAT-3]
 gi|145960730|gb|EDK26070.1| bacterial peptide chain release factor 2 (RF-2) [Vibrionales
           bacterium SWAT-3]
          Length = 248

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 150/246 (60%), Positives = 191/246 (77%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE D++D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FKTE +E+ +GE AG+K
Sbjct: 1   MFSGEHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKTEVIEVSEGEVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            AT+ I G  AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I I+I+ S
Sbjct: 61  GATVRISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNITIDINPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +RSQHKNK QA   LRAKL+E
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LE+QK+       E +K++IGWG QIRSYVL     +KDLRT IE  +   VLDGDLD F
Sbjct: 181 LEIQKQNAEKQANEDTKSDIGWGSQIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDKF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|325269739|ref|ZP_08136350.1| peptide chain release factor RF1 [Prevotella multiformis DSM 16608]
 gi|324987940|gb|EGC19912.1| peptide chain release factor RF1 [Prevotella multiformis DSM 16608]
          Length = 370

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 93/354 (26%), Positives = 158/354 (44%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   ++T   DP +  +      L +E + L + +   +   + L       ++
Sbjct: 11  LDGLEARYEEVSTLITDPSVIADQKRYVKLTKEYKDLGDIMDARRRYVNCLTTIKEAKDI 70

Query: 76  ALEEDDCSILQETSDNLQRIK----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L   +       E  +   +     D  +  +E+  GAGG E+ 
Sbjct: 71  IANESDAEMKEMAREELSENEGLQPKIEEEIKLLLVPKDPEDGKNVQMEIRGGAGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY R+ +K+ +K     + +G   G K     ++G N YG LK E GVHR+ 
Sbjct: 131 LFAGDLFNMYKRYCDKKGWKLSVTSVSEGAVGGFKEIDFAVEGENVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P  D      I+E D + DT+R+SGAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRMHTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKVESGVR 249

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +            ++++C + R Q KNK +A + L   +Y+ E QK   I +I    K
Sbjct: 250 LRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTYIYDHEHQKY--IDDIASRRK 307

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T +  G +   IR+Y   P   V D R           ++GD+ + + A    +
Sbjct: 308 TLVSTGDRSAKIRTYNF-PQGRVTDHRIGFTTHDLQGFMNGDIQEMIDALTVAE 360


>gi|237721316|ref|ZP_04551797.1| peptide chain release factor 1 [Bacteroides sp. 2_2_4]
 gi|229449112|gb|EEO54903.1| peptide chain release factor 1 [Bacteroides sp. 2_2_4]
          Length = 370

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 102/354 (28%), Positives = 167/354 (47%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R    +T   DP +  +      L +E + LD+ +   KE    L +      +
Sbjct: 11  LDGLVARFEETSTLITDPAVIADQKRYVKLTKEYKELDDLMKARKEYIQLLGNIEEAKNI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + +   +  +   + E  L        DS +A LE+  GAGG E+ 
Sbjct: 71  LANESDAEMREMAKEEMDNSQERLPVLEEEIKLMLVPADPQDSKNAILEIRGGAGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + +K E    ++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 IFAGDLFRMYAKFCETKGWKMEVSNANEGTAGGFKEVVCSVTGDNVYGILKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +S+ V P  ++   + I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRVHTSAASVAVLPEAEEFDVV-INEGEIKWDTFRSGGAGGQNVNKVESGVR 249

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +I           ++++C + R Q KNK +A   LR  +Y+ E QK   I +I    K
Sbjct: 250 LRYIWKNPNTGIAEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--IDDIASKRK 307

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T +  G +   IR+Y   P   + D R N    + +  +DGD+ D +   +  +
Sbjct: 308 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLAAFMDGDIQDCIDHLIVAE 360


>gi|290580477|ref|YP_003484869.1| putative peptide chain release factor 1 [Streptococcus mutans
           NN2025]
 gi|254997376|dbj|BAH87977.1| putative peptide chain release factor 1 [Streptococcus mutans
           NN2025]
          Length = 359

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 99/348 (28%), Positives = 164/348 (47%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  + +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDIVSDTKCFMKLSREEANSRETVAVYREYKQVVQNIADAQEM 66

Query: 76  ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +  D   L+E +    +      +   E  +F  L     D  +  LE+   AGG E+
Sbjct: 67  IKDASDDPELEEMAKEELKNSKVAKEEYEEKLKFLLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + +K E +E       G+K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLNMYQKYAENQGWKFEVMEASANGVGGLKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E EI   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ +G G 
Sbjct: 246 RIIHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILYDQ 350


>gi|145635061|ref|ZP_01790767.1| peptide chain release factor 2 [Haemophilus influenzae PittAA]
 gi|148826180|ref|YP_001290933.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae PittEE]
 gi|145267669|gb|EDK07667.1| peptide chain release factor 2 [Haemophilus influenzae PittAA]
 gi|148716340|gb|ABQ98550.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae PittEE]
          Length = 248

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 150/247 (60%), Positives = 192/247 (77%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D+ D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+K
Sbjct: 1   MFSGKHDACDCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +
Sbjct: 61  SATIKVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LELQK+       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F
Sbjct: 181 LELQKKNADKQAMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRF 239

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 240 IEASLKA 246


>gi|119715986|ref|YP_922951.1| peptide chain release factor 1 [Nocardioides sp. JS614]
 gi|166223579|sp|A1SHH9|RF1_NOCSJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119536647|gb|ABL81264.1| bacterial peptide chain release factor 1 (bRF-1) [Nocardioides sp.
           JS614]
          Length = 357

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 120/351 (34%), Positives = 181/351 (51%), Gaps = 13/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +  +   + L  +   P    +   AK L +    L + I   +E+Q    D   
Sbjct: 1   MFEAVEGMLAEHADLEQRLGAPETHADARLAKQLNQRYAALSSIIGAYRELQQLDDDIEA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EL   ++D +  +E +    R +   E  +   +    AD  DA LEV +G GG ES 
Sbjct: 61  AREL--AQEDPAFAEEAAALTGRRQEVEERLRRLLVPRDAADDKDAILEVKSGEGGEESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGE 184
            +A  LLRMYTR+AE R +K E L+  + +  G KS T+ +        G   Y  LK E
Sbjct: 119 LFAGDLLRMYTRYAEARGWKVEVLDAAESDLGGYKSVTVAVKAKGTPEPGEAPYALLKFE 178

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS + + V P   + ++++I E+D RID +R+SG GGQ VN
Sbjct: 179 GGVHRVQRVPVTESQGRVHTSAAGVLVLP-EAEQVDVQIDENDLRIDVFRSSGPGGQSVN 237

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRITH+PTG+VV CQ E+SQ +N+ QA  +LR++L     +K +  A     S+ 
Sbjct: 238 TTDSAVRITHLPTGIVVSCQNEKSQLQNREQAMRILRSRLLAAAQEKADAEAGEARRSQV 297

Query: 305 E-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +    +IR+Y   P   + D RT  +  +   VLDGDL   + + +   
Sbjct: 298 RTVDRSERIRTYNF-PENRISDHRTGYKAYNLDQVLDGDLQPVLDSCVEAD 347


>gi|256820779|ref|YP_003142058.1| peptide chain release factor 1 [Capnocytophaga ochracea DSM 7271]
 gi|315223922|ref|ZP_07865767.1| peptide chain release factor RF1 [Capnocytophaga ochracea F0287]
 gi|256582362|gb|ACU93497.1| peptide chain release factor 1 [Capnocytophaga ochracea DSM 7271]
 gi|314946094|gb|EFS98098.1| peptide chain release factor RF1 [Capnocytophaga ochracea F0287]
          Length = 357

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 97/350 (27%), Positives = 169/350 (48%), Gaps = 12/350 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  +   QR   ++     P +  +      L +E + L   +    E  +   +   
Sbjct: 1   MLDKLNIVKQRFDEVSDLIIQPDIIADQKRYIQLNKEYKDLKELMDKRDEYINVTGNLQE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAGG 127
             E+  +  D  +++     L+  K  +   + E           D+ +A +E+ AG GG
Sbjct: 61  AEEIIADGSDAEMVEMAKLQLEESKERLPQLEEEIKYMLIPKDPEDAKNAVMEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYT++ + + + T  ++ ++G   G K     + G N YG LK E GV
Sbjct: 121 DEASIFAGDLYRMYTKYCQSKGWSTSVMDFNEGTAGGYKEIIFEVTGDNVYGTLKFEAGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P  ++     +  +D +I    ++G GGQ VNTT 
Sbjct: 181 HRVQRVPQTETQGRVHTSAATVIVLPEAEEFDVE-LDMADVKIIRTTSTGPGGQSVNTTY 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SA+++ HIPTG+ V+CQ E+SQHKN  +A  +LR++LYE+EL K+ E        K+ + 
Sbjct: 240 SAIQLQHIPTGIEVRCQDEKSQHKNLEKALKVLRSRLYEMELAKKME--ADSARRKSMVS 297

Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            G +   IR+Y   P   V D R  +      +V++GD+   +      +
Sbjct: 298 SGDRSAKIRTYNY-PQGRVTDHRIGLTLYDLQNVINGDVQRLIDELQLAE 346


>gi|261366981|ref|ZP_05979864.1| peptide chain release factor 1 [Subdoligranulum variabile DSM
           15176]
 gi|282571098|gb|EFB76633.1| peptide chain release factor 1 [Subdoligranulum variabile DSM
           15176]
          Length = 359

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 105/350 (30%), Positives = 172/350 (49%), Gaps = 11/350 (3%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
                   +R   L  +   P           +M++ + L   +   +            
Sbjct: 4   FLQLHEVERRYEELAYRMSAPDAAAQPDVYARMMKDYKELTPLVEEYRRYTSLQQQQTET 63

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGT 128
            EL  +E D +        L  I   +   +       L     D  +  LE+ AGAGG 
Sbjct: 64  NELVQQETDPAFKAMVQQELCEIARNLAQSEENLRLLLLPKDADDEKNVILEIRAGAGGE 123

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A+ L RMYT +A KR +  + +  ++ E  G+K     ++G + Y  LK E GVH
Sbjct: 124 EAALFAHSLWRMYTMYASKRGWSCQTISANETELGGVKEVVFSVEGADVYSRLKFESGVH 183

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS  ++ V P   + +E+E+   D RIDT+R+SGAGGQH+N T S
Sbjct: 184 RVQRVPETETQGRIHTSTVTVAVMP-EAEEVELELDPKDLRIDTFRSSGAGGQHINKTSS 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           A+R+TH+PTG+VV+CQ +RSQ +NK +A  +LR++L  L+ +++       E  ++++G 
Sbjct: 243 AIRVTHLPTGMVVECQDQRSQRENKERALTVLRSRL--LQQKQQAYDEAYNEKRQSQVGT 300

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G    +IR+Y   P   V D R  +   +   VLDGDLD  ++  +   +
Sbjct: 301 GDRSEKIRTYNF-PQDRVTDHRIGLTLRNLQGVLDGDLDRVLEPLILADR 349


>gi|86138685|ref|ZP_01057258.1| peptide chain release factor 1 [Roseobacter sp. MED193]
 gi|85824745|gb|EAQ44947.1| peptide chain release factor 1 [Roseobacter sp. MED193]
          Length = 361

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 123/344 (35%), Positives = 174/344 (50%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +QR  +L     +     +  E   L RE   +      I   +  L D      +
Sbjct: 17  LEQILQRFQYLEAAMAEG---ASGAEIANLAREYSEIKPVAEQITAYRQLLTDLEDAEAM 73

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   +  E    L+      E   Q   L    AD+  A LE+  G GG E+  +A
Sbjct: 74  LSDPDMKELAAEEIPELKAALPGAEEALQLALLPKDAADARPAMLEIRPGTGGDEAALFA 133

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE R +K E +E    E  GIK     IKG N +  +K E GVHR+ R+ 
Sbjct: 134 GDLLRMYQRYAEARGWKFEVIEEQATELGGIKEVVAHIKGENVFARMKYESGVHRVQRVP 193

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P     ++++I  SD RIDT RASGAGGQHVNTTDSAVRITH
Sbjct: 194 VTESGGRIHTSAATVAVLP-EAQEVDVQIDPSDIRIDTMRASGAGGQHVNTTDSAVRITH 252

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTGV+V    E+SQH+N+  A  +LRA+LY+LE Q+ +          +++G G    +
Sbjct: 253 IPTGVMV-VSAEKSQHRNREIAMQVLRARLYDLERQRVDSER--SADRASQVGSGDRSER 309

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++ GDLD+ + A  A  +
Sbjct: 310 IRTYNF-PQGRMSDHRINLTLYKLDQIMQGDLDEIIDALTADNQ 352


>gi|237785868|ref|YP_002906573.1| peptide chain release factor 1 [Corynebacterium kroppenstedtii DSM
           44385]
 gi|259585217|sp|C4LJM5|RF1_CORK4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|237758780|gb|ACR18030.1| peptide chain release factor RF-1 [Corynebacterium kroppenstedtii
           DSM 44385]
          Length = 357

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 113/346 (32%), Positives = 177/346 (51%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V     L  +  DP L  +   A+ + +    L   I     +     D     E+
Sbjct: 8   VDDIVSEYQGLEAQLADPDLHNDAARARKVGKRFSELQPIIQTNDRLNAVTDDLEAAEEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E+ + +   E     +    +              D +D  +EV +GAGG E+  +A 
Sbjct: 68  AHEDQEFAAEAERLREEKEELSDKLADLL--APRDPHDGDDIVMEVKSGAGGEEAALFAG 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190
            L+RMY R+A+K  F  + L+    +  GIK  T+ I+        A+   K E GVHR+
Sbjct: 126 ELVRMYQRYADKHGFAIDVLDDAPTDLGGIKDITMSIRSKKPSRDGAWSVFKFEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R  TS + + VYP  D+  ++EI + D R+D YR+SG GGQ VNTTDSAV
Sbjct: 186 QRVPVTESQGRIQTSAAGVLVYPEPDEIEDVEIDDKDIRVDVYRSSGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG++V CQ+ERSQ +NKA+A  +L A+L +++ ++ E  A+   +++   +   
Sbjct: 246 RITHLPTGLIVTCQKERSQIQNKARAMQVLAARLQQMKEEEAEAAASADRAAQVRTMDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N +  +   VLDGDLDD   A  + ++
Sbjct: 306 ERIRTYNF-PENRISDHRINYKAHNLDQVLDGDLDDLFSALQSAER 350


>gi|171057271|ref|YP_001789620.1| peptide chain release factor 1 [Leptothrix cholodnii SP-6]
 gi|238689096|sp|B1XYX1|RF1_LEPCP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|170774716|gb|ACB32855.1| peptide chain release factor 1 [Leptothrix cholodnii SP-6]
          Length = 360

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 114/336 (33%), Positives = 177/336 (52%), Gaps = 7/336 (2%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           RL+ ++    DP +   +   + L RE   +   +   +  + R  D     EL  E + 
Sbjct: 15  RLAEIDAALADPKVCSQIGTLRSLNREHARVSALVDRWQRYEQREQDLAGAQELLDEPEM 74

Query: 82  CSILQETSDNLQRIKLEVEYKQF-ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
             + +      Q     ++ +     +     D  +A++E+ AG GG ES  +A  L RM
Sbjct: 75  AELARAEIGAAQADLDRLDSELLTALMPRDADDDRNAFVEIRAGTGGEESALFAADLARM 134

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y R AE+R +KTE +     +  G K   L I G   +  LK E G HR+ R+   ++  
Sbjct: 135 YLRHAERRGWKTELMSESVSDLGGYKDVVLHIIGDAVFEALKYESGGHRVQRVPATEAQG 194

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS  ++ V    D++ E+ ++ ++ RIDTYRASGAGGQH+N TDSAVR+TH+PTG+V
Sbjct: 195 RIHTSACTVAVLAEADEAEEVSLNPAELRIDTYRASGAGGQHINKTDSAVRVTHLPTGLV 254

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317
            +CQ +RSQH+NKA+A  +L A+L +    ++E+ A    + K+ IG G    +IR+Y  
Sbjct: 255 AECQDDRSQHRNKARALAVLAARLRD--RVRQEQAAKDAAARKSLIGSGDRSDRIRTYNF 312

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            P   + D R N+       VL+GDLD+ + A  A 
Sbjct: 313 -PQGRLTDHRINLTLYKLGAVLEGDLDEVIGALQAA 347


>gi|300727227|ref|ZP_07060643.1| peptide chain release factor 1 [Prevotella bryantii B14]
 gi|299775465|gb|EFI72059.1| peptide chain release factor 1 [Prevotella bryantii B14]
          Length = 370

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 94/359 (26%), Positives = 157/359 (43%), Gaps = 20/359 (5%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +  +    R   ++T   DP +  +      L +E + L + +   K     L    
Sbjct: 6   SILEKLEGLESRFEEVSTLITDPSVIADQPRFVKLTKEYKDLSDIMDARKRYIACLNSIK 65

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAG 126
              ++   E D  + +   + L   +      + E           D+ +  +E+ AGAG
Sbjct: 66  EAKDILANESDPDMKEMAREELSENEALQPKLEEEIKIALVPKDPEDAKNVQMEIRAGAG 125

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L  MY ++ +KR +        +G   G K     I G N YG LK E G
Sbjct: 126 GDEAALFAGDLFNMYKKYCDKRGWTLSITSTSEGAVGGFKEIDCAISGDNVYGVLKYESG 185

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +++ V P  D      I+E D + DT+R+SGAGGQ+VN  
Sbjct: 186 VHRVQRVPATETQGRMHTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKV 244

Query: 247 DSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           +S VR+ +            ++++C + R Q KNK +A + L   +Y+ E QK  +  +I
Sbjct: 245 ESGVRLRYPWKNPNTGEIEEILIECTETRDQPKNKERALSRLYTYIYDHEHQKYLD--DI 302

Query: 299 GESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               K+ +  G +   IR+Y   P   V D R           L+GD+ D + A    +
Sbjct: 303 SSRRKSLVSTGDRSAKIRTYNF-PQGRVTDHRIGYTTHDLQGFLNGDIQDMIDALTVAE 360


>gi|148656981|ref|YP_001277186.1| peptide chain release factor 1 [Roseiflexus sp. RS-1]
 gi|148569091|gb|ABQ91236.1| bacterial peptide chain release factor 1 (bRF-1) [Roseiflexus sp.
           RS-1]
          Length = 364

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 112/349 (32%), Positives = 171/349 (48%), Gaps = 14/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             N   R + L      P +  + +  +  +RE++ L+  +   +  +D          L
Sbjct: 9   LANVAARYNELLDLMAQPEIATDPVRLQQYVREQRDLEPLVEAYQAYRDVERQIEDTRFL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + Q   + L  +       +       L     DS +  +E+  G GG E+ 
Sbjct: 69  LANETDPEVRQLAQEELDHLIERRARLETDIKVLLLPRDPNDSKNVIMELRQGEGGDEAA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE+R +  + +   +    G K     IKG  AY  LK E GVHR+ 
Sbjct: 129 LFAADLFRMYTRYAEQRGWDVDVISATENGPGGYKEIVFEIKGEGAYSRLKYEGGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P ++++    ++ SD R+D +R+SG GGQ VNTTDSAVR
Sbjct: 189 RVPATEARGRIHTSTATVAVLPEIEETEIE-LNPSDYRVDVFRSSGHGGQGVNTTDSAVR 247

Query: 252 ITHIP---TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           I + P     +VV CQ  RSQ KNKA A  +LRA+LY  E +KR +   +GES   ++G 
Sbjct: 248 IVYKPGTPEEIVVTCQDSRSQLKNKASALAVLRARLYAREEEKRRKE--LGESRLAQVGA 305

Query: 309 GRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           G +   IR+Y   P   V D R     ++   +LDGDLD  + A +   
Sbjct: 306 GERAEKIRTYNF-PQDRVTDHRIGQNFSNLPGILDGDLDRLIDALIIAD 353


>gi|163846084|ref|YP_001634128.1| peptide chain release factor 1 [Chloroflexus aurantiacus J-10-fl]
 gi|222523819|ref|YP_002568289.1| peptide chain release factor 1 [Chloroflexus sp. Y-400-fl]
 gi|189039962|sp|A9WE79|RF1_CHLAA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790872|sp|B9LJ02|RF1_CHLSY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|163667373|gb|ABY33739.1| peptide chain release factor 1 [Chloroflexus aurantiacus J-10-fl]
 gi|222447698|gb|ACM51964.1| peptide chain release factor 1 [Chloroflexus sp. Y-400-fl]
          Length = 360

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 113/352 (32%), Positives = 170/352 (48%), Gaps = 14/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD       R   L      P +  NV   +   RE++ +++ ++  +E Q        
Sbjct: 1   MFDKLAAVAARYDELTELMAQPEVATNVTLLQQYAREQREIEDIVNAYREYQATQRAIEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
              +  + D         +   + K      E  +   L     DS D  +E+  G GG 
Sbjct: 61  AEAMLEDSDPELRALAQEELETQRKRLASLEEQLKLLLLPRDPNDSKDVIMEIRQGEGGD 120

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMYTR+AE R +K E   + +    GIK     I G  AY  LK E GVH
Sbjct: 121 EAALFAADLFRMYTRFAESRGWKVEVDSLTENGIGGIKEVIFQIHGEGAYSQLKYEGGVH 180

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS +++ V P V+++    I   D RID +R++G GGQ VNTTDS
Sbjct: 181 RVQRVPATEARGRIHTSTATVAVLPEVEETEIE-IKPEDLRIDVFRSAGHGGQGVNTTDS 239

Query: 249 AVRITHIP---TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           AVRI + P     +VV CQ  RSQ +N+ +A  +LRA+LY  E +KR+    IG S   +
Sbjct: 240 AVRIVYKPGTPEEIVVTCQDGRSQIQNRERAMTVLRARLYAREQEKRQ--REIGASRLAQ 297

Query: 306 IGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +G G +   IR+Y   P   + D R     ++   VLDG+LD  ++A +   
Sbjct: 298 VGSGERAEKIRTYNF-PQDRITDHRIGQNFSNLPAVLDGELDKIIEALIIYD 348


>gi|224373415|ref|YP_002607787.1| peptide chain release factor 1 [Nautilia profundicola AmH]
 gi|254790893|sp|B9L5Z9|RF1_NAUPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|223590043|gb|ACM93779.1| peptide chain release factor 1 [Nautilia profundicola AmH]
          Length = 355

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 106/348 (30%), Positives = 177/348 (50%), Gaps = 12/348 (3%)

Query: 16  WDNAV---QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
            D      ++ + +N     P + Q++     L RE + L+  +   KE ++ +      
Sbjct: 3   LDKLKPFVEKYNEINQMLSSPEITQDIKRMTKLSREARSLEPIVEKAKEYENIINTIEEA 62

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  + +   + +E     +    E+E   +   L     D  + +LE+ AG GG E+ 
Sbjct: 63  KMMLDDPEMAELAKEELKEAEEKLPELEEEIKILLLPKDPNDDKNIFLEIRAGTGGDEAA 122

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   LL+ Y R+A+ + +K E +     +  G K   LLIKG + Y  LK E G HR+ 
Sbjct: 123 LFVGDLLKAYLRYADNKGWKVEIVSESKSDAGGYKEIILLIKGESVYSRLKYEGGTHRVQ 182

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS  ++ + P   D ++IE+   D +I+  RA GAGGQHVN T+SAVR
Sbjct: 183 RIPATESQGRIHTSAVTVAIMP-EVDDVDIELDPKDIKIEVMRAGGAGGQHVNKTESAVR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+ V  Q ERSQ +NK +A  +L+A+++  E  + E +A IGE+ K+++G G  
Sbjct: 242 MTHIPTGITVSMQDERSQQRNKEKAMQILKARVF--EKLENERLAAIGEARKSQVGSGDR 299

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R  +       ++ +G  D+ +   +A  +
Sbjct: 300 SERIRTYNY-PQNRITDHRIGLTLYRLEQIMSEGLFDEIIDPLIAHYQ 346


>gi|290954114|ref|ZP_06558735.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312499|ref|ZP_06803267.1| peptide chain release factor 2 [Francisella tularensis subsp.
           holarctica URFT1]
          Length = 241

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 145/238 (60%), Positives = 182/238 (76%), Gaps = 1/238 (0%)

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
           N A+L++ +G+GGTE+QDWA ML+RMY RWA+   FK    ++ DG+ AGIK  TL I+G
Sbjct: 2   NKAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSHGFKVTVDDVSDGDVAGIKGCTLKIEG 61

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S+++ P VDD I+IEI+ +D R+DTYR
Sbjct: 62  EYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFASVFISPEVDDDIDIEINPADLRVDTYR 121

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASGAGGQHVN TDSAVRITHIPT +VVQ Q +RSQHKN+  A   L++KLYE+ELQKR  
Sbjct: 122 ASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRSQHKNRDNAMKQLKSKLYEMELQKRNA 181

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             N  E SK +IGWG QIRSYVL     +KDLRT +E T+   VLDGDLD F++A+L 
Sbjct: 182 EKNALEDSKADIGWGSQIRSYVLD-QSRIKDLRTGVENTNTQAVLDGDLDKFIEASLK 238


>gi|289663374|ref|ZP_06484955.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289668830|ref|ZP_06489905.1| peptide chain release factor 2 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 276

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 153/259 (59%), Positives = 198/259 (76%), Gaps = 1/259 (0%)

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
            +  VE  +F+ + SG+ D  +A++++ AGAGGTE+QDWA +LLRMY RWAE R +KTE 
Sbjct: 8   YQTHVEKLEFQRMFSGQMDGANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTEL 67

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E+  GE AGIKSAT+ I+G  AYGWLK E GVHRLVR SP+DS++RRHTSF+S++V P 
Sbjct: 68  MEVSGGEVAGIKSATIRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPE 127

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           VDD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT  VV CQ  RSQH+N+ 
Sbjct: 128 VDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRSQHQNRD 187

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A  ML AKLYELE+QKR    +  E++K++IGWG QIR+YVL     +KDLRT IE++ 
Sbjct: 188 NAMKMLAAKLYELEVQKRNVERDALEATKSDIGWGSQIRNYVLD-QSRIKDLRTGIERSD 246

Query: 335 PSDVLDGDLDDFMKATLAI 353
              VLDGDLD+F++A+L  
Sbjct: 247 TQKVLDGDLDEFVEASLKA 265


>gi|328794147|ref|XP_003252002.1| PREDICTED: peptide chain release factor 2-like, partial [Apis
           mellifera]
          Length = 276

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 139/265 (52%), Positives = 182/265 (68%)

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
             +LQ+++ E    + + LLSG+ DS++A +E+H GAGGTE+ DW  MLLRMY R+A+  
Sbjct: 4   ETDLQKLQSEFHNYELDLLLSGKYDSHNALIEIHPGAGGTEAMDWGQMLLRMYQRYADIC 63

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E      GEEAG+KS +  + G NAYG +K E GVHRLVRISP+DS  RRHTSF+S
Sbjct: 64  GFKFEINNYEPGEEAGLKSVSAKVCGKNAYGLMKSENGVHRLVRISPFDSAKRRHTSFAS 123

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P +DDSI+++I+  D RID YR+SGAGGQH+N T SAVRITH+PTG V   Q +RS
Sbjct: 124 VEVIPEIDDSIKVDINPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGFVTTSQAQRS 183

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q +N+  A N LRAKL+ LE +K+ +     +  + EIGWG QIRSYV  PY +VKDLRT
Sbjct: 184 QLQNRETAMNELRAKLFHLEEEKKRQHKQALKGDQKEIGWGSQIRSYVFHPYNLVKDLRT 243

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353
             E +  S V+DG L  F+ + L  
Sbjct: 244 GYETSDTSGVMDGKLQPFVYSYLQW 268


>gi|295134987|ref|YP_003585663.1| peptide chain release factor 1 [Zunongwangia profunda SM-A87]
 gi|294983002|gb|ADF53467.1| peptide chain release factor 1 [Zunongwangia profunda SM-A87]
          Length = 358

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 98/342 (28%), Positives = 167/342 (48%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QR   +N     P +  +      L +E + L   ++  +   +   +     E+
Sbjct: 5   LNIVKQRFDEVNDLIIQPDIIADQKRYVELNKEYKDLRALMNERERYIELTDNLKEAEEI 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +      +  K E+   +       +     D+ +  +E+ AG GG E+ 
Sbjct: 65  ISDGSDPEMTEMAKLQQEEAKQELPALEEKIRMMLVPKDPEDAKNVVMEIRAGTGGDEAS 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYT++ E + +    ++  +G   G K     + G + YG +K E GVHR+ 
Sbjct: 125 IFAGDLYRMYTKYVESKGWSHNIVDFSEGTSGGFKEMIFEVSGEDVYGTMKFEAGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P  ++     I   D RID + +SG GGQ VNTT SAVR
Sbjct: 185 RVPQTETQGRVHTSAATVMVLPEAEEFDVE-IDPKDVRIDYFCSSGPGGQSVNTTYSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +TH PTG+V QCQ ++SQHKN+ +A+ +LR++LYE+EL K+ E         + +  G +
Sbjct: 244 LTHEPTGLVAQCQDQKSQHKNREKAFRVLRSRLYEIELAKKME--ADAAKRNSMVSSGDR 301

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              IR+Y   P   V D R N+     S++++GD+   +   
Sbjct: 302 SAKIRTYNY-PQGRVTDHRINLTLYDLSNIVNGDIQKIIDEL 342


>gi|251799802|ref|YP_003014533.1| peptide chain release factor 1 [Paenibacillus sp. JDR-2]
 gi|247547428|gb|ACT04447.1| peptide chain release factor 1 [Paenibacillus sp. JDR-2]
          Length = 356

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 103/351 (29%), Positives = 179/351 (50%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCD 68
           + D       R   L+    DP +  +    +   +E+  L  A     E +    +L D
Sbjct: 1   MLDRLQALADRYEKLSELLCDPDVASDPKRLREYSKEQSDLQEAYEAFTEYKQVSEQLED 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             ++    L+++   +++   D L   K    E  +   L     D  +  +E+   AGG
Sbjct: 61  AKLMQGEKLDDEMREMVKMEIDELTERKTALDEKIRIVLLPKDPNDDKNVIVEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYT++A+ + ++ E +++++ +  G K    +I G  AY  +K E G 
Sbjct: 121 DEAALFAYELYRMYTKFADAQGWRCELMDLNENDLGGFKEVIFMITGKGAYSKMKYESGA 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS S++       + +E+EI + D RIDT+ +SGAGGQ VNTT 
Sbjct: 181 HRVQRIPVTESGGRIHTSTSTVS-VMPEVEEVEVEILDKDIRIDTFCSSGAGGQSVNTTK 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+ H+PTG++  CQ  +SQ++NKA+A  +LRA++ ++  +++EE A      K ++G
Sbjct: 240 SAVRVLHVPTGIMATCQDGKSQNENKAKALQVLRARISDI--RRQEEEAKYAGERKLKVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +       V++GD+ + + +    ++
Sbjct: 298 TGDRSERIRTYNF-PQSRVTDHRIGLTLHKLDSVMNGDMAEIVSSLTIAEQ 347


>gi|225010612|ref|ZP_03701082.1| peptide chain release factor 1 [Flavobacteria bacterium MS024-3C]
 gi|225005165|gb|EEG43117.1| peptide chain release factor 1 [Flavobacteria bacterium MS024-3C]
          Length = 358

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 101/339 (29%), Positives = 171/339 (50%), Gaps = 11/339 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             QR   ++     P + Q+      L +E + L + +   +       +     E+  +
Sbjct: 8   VKQRFDEVSDLIIQPDIIQDQKRYVQLNKEYKDLKSLMDKRELYISFTNNIEESQEIIDD 67

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             D  +++     L   K  +   +    F  +     D+ +  +E+ AG GG E+  +A
Sbjct: 68  GSDAEMVEMAKMQLDEAKAALPALEEEIKFLLIPKEPEDAKNVVVEIRAGTGGDEASIFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYT++ E R +KT  +++ +G   G K     + G + YG LK E GVHR+ R+ 
Sbjct: 128 GDLFRMYTKYCESRGWKTNVIDLSEGTSGGYKEIQFEVNGEDVYGTLKFEAGVHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P  ++     I   D RID + +SG GGQ VNTT SAVR+TH
Sbjct: 188 QTETQGRVHTSAATVMVLPEAEEFDVQ-IDPKDVRIDFFCSSGPGGQSVNTTYSAVRLTH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           +PTG+V QCQ ++SQHKNK +A+ +LR++LY++EL K++E         +++  G +   
Sbjct: 247 LPTGLVAQCQDQKSQHKNKDKAFVVLRSRLYDMELAKKQE--ADAAKRNSQVSSGDRSAK 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   V D R  +      ++++GD+   +   
Sbjct: 305 IRTYNY-PQGRVTDHRIGLTLYDLQNIVNGDIQKILSEL 342


>gi|322374351|ref|ZP_08048865.1| peptide chain release factor 1 [Streptococcus sp. C300]
 gi|331266424|ref|YP_004326054.1| peptide chain release factor 1 [Streptococcus oralis Uo5]
 gi|321279851|gb|EFX56890.1| peptide chain release factor 1 [Streptococcus sp. C300]
 gi|326683096|emb|CBZ00714.1| peptide chain release factor 1 [Streptococcus oralis Uo5]
          Length = 359

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 97/348 (27%), Positives = 161/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   ++
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEDM 66

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E       +    QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|319776546|ref|YP_004139034.1| peptide chain release factor 2 [Haemophilus influenzae F3047]
 gi|317451137|emb|CBY87370.1| peptide chain release factor 2 [Haemophilus influenzae F3047]
          Length = 248

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 150/247 (60%), Positives = 193/247 (78%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE D+ + Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+K
Sbjct: 1   MFSGEHDACNCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +
Sbjct: 61  SATIKVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LELQK+     + E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F
Sbjct: 181 LELQKKNADKQVMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRF 239

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 240 IEASLKA 246


>gi|227503858|ref|ZP_03933907.1| peptide chain release factor 1 [Corynebacterium striatum ATCC 6940]
 gi|227199481|gb|EEI79529.1| peptide chain release factor 1 [Corynebacterium striatum ATCC 6940]
          Length = 358

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 112/346 (32%), Positives = 174/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V     +  +  DP +  +    + L +    L   ++   ++     D     E+
Sbjct: 8   VDDIVSEYQGIEMQMGDPEVAGDQKLFRKLSKRYAELRPIVAVNNDLVQARQDLEDAKEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D     E       +    E          E DS D  +E+ AGAGG E+  +A 
Sbjct: 68  --AYEDHDFQDEVDRLEPLVVELEEKLADLLAPRDEHDSEDIIMEIKAGAGGEEAALFAG 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190
            L RMY R+A+K  F+ E L +++ +  G+K  ++  K        A+   K E GVHR+
Sbjct: 126 DLARMYERFADKAGFQWEVLGLNESDLGGVKDMSISFKSKTPSRDGAWSVFKFEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R  TS + + VYP  D+   + I E D R+D YR+SG GGQ VNTTDSAV
Sbjct: 186 QRVPVTESQGRIQTSAAGVLVYPEPDEVESVNIDEKDLRVDVYRSSGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG+VV CQ+ERSQ +NKA+A  +L+A+L ++E + RE  A    +S+   +   
Sbjct: 246 RITHLPTGLVVTCQKERSQIQNKARALQVLQARLDQIEREAREAEAGEQRASQVRTLDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R   +  +   VL+GD+ D + A  A ++
Sbjct: 306 ERIRTYNW-PENRITDHRIGYKANNLDAVLNGDMQDLITALQAQER 350


>gi|145631266|ref|ZP_01787039.1| peptide chain release factor 2 [Haemophilus influenzae R3021]
 gi|145633057|ref|ZP_01788789.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae 3655]
 gi|145637033|ref|ZP_01792696.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae PittHH]
 gi|145639267|ref|ZP_01794873.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae PittII]
 gi|145641183|ref|ZP_01796763.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae R3021]
 gi|148828361|ref|YP_001293114.1| peptide chain release factor 2 [Haemophilus influenzae PittGG]
 gi|229844833|ref|ZP_04464971.1| peptide chain release factor 2 [Haemophilus influenzae 6P18H1]
 gi|229846242|ref|ZP_04466354.1| peptide chain release factor 2 [Haemophilus influenzae 7P49H1]
 gi|319897322|ref|YP_004135518.1| peptide chain release factor 2 [Haemophilus influenzae F3031]
 gi|144983193|gb|EDJ90688.1| peptide chain release factor 2 [Haemophilus influenzae R3021]
 gi|144986283|gb|EDJ92862.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae 3655]
 gi|145269687|gb|EDK09627.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae PittHH]
 gi|145271570|gb|EDK11481.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae PittII]
 gi|145274020|gb|EDK13886.1| 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
           [Haemophilus influenzae 22.4-21]
 gi|148719603|gb|ABR00731.1| peptide chain release factor 2 [Haemophilus influenzae PittGG]
 gi|229811246|gb|EEP46963.1| peptide chain release factor 2 [Haemophilus influenzae 7P49H1]
 gi|229812214|gb|EEP47905.1| peptide chain release factor 2 [Haemophilus influenzae 6P18H1]
 gi|317432827|emb|CBY81192.1| peptide chain release factor 2 [Haemophilus influenzae F3031]
          Length = 248

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 151/247 (61%), Positives = 192/247 (77%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE D+ D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+K
Sbjct: 1   MFSGEHDACDCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +
Sbjct: 61  SATIKVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LELQK+       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F
Sbjct: 181 LELQKKNADKQAMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRF 239

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 240 IEASLKA 246


>gi|197335699|ref|YP_002155207.1| peptide chain release factor 2 [Vibrio fischeri MJ11]
 gi|197317189|gb|ACH66636.1| peptide chain release factor 2 [Vibrio fischeri MJ11]
          Length = 248

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 148/246 (60%), Positives = 191/246 (77%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D++D Y+++ +G+GGTE+QDW +M+LRMY RWAE + FK E +E+ +GE AG+K
Sbjct: 1   MFSGDHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKVEVIEVSEGEVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            AT+ I G  AYGWL+ E GVHRLVR SP+DS+ RRHTSF+S ++YP +DD+I+I+I+ S
Sbjct: 61  GATVRIAGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEIDDNIQIDINPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVNTT+SAVRITH+PT +VVQCQ +RSQHKNK QA   LRAKL+E
Sbjct: 121 DLRIDVYRASGAGGQHVNTTESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLRAKLFE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            ELQK+       E +K++IGWG QIRSYVL     +KDLRT IE  +   VLDGDLD F
Sbjct: 181 YELQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDLRTGIENRNTQAVLDGDLDKF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|303237122|ref|ZP_07323692.1| peptide chain release factor 1 [Prevotella disiens FB035-09AN]
 gi|302482509|gb|EFL45534.1| peptide chain release factor 1 [Prevotella disiens FB035-09AN]
          Length = 370

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 94/359 (26%), Positives = 157/359 (43%), Gaps = 20/359 (5%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +  D    R   ++T   DP +  +      L +E + L + +   K     L    
Sbjct: 6   SILEKLDGLEARFLEVSTLITDPDVISDQQRYVKLTKEYKDLGDIMDARKRYIKCLTTIS 65

Query: 71  I----LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
                L     +E       E S+N + +    E  +   +     D  +  +E+ AGAG
Sbjct: 66  EAKDILTNETDQEMKEMARLELSENEELLPNLEEEIKLLLVPKDPEDDKNVQMEIRAGAG 125

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  +  MY R+ +K+ +      + +G   G K     + G   YG LK E G
Sbjct: 126 GDEAALFAGDIFNMYKRYCDKKGWNLSITSVSEGTVGGFKEIDFAVAGTGVYGILKYESG 185

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   D+  R  TS +++ V P  D      I+E D + DT+R+SGAGGQ+VN  
Sbjct: 186 VHRVQRVPSTDTQGRMQTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKV 244

Query: 247 DSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           +S VR+ +            ++++C + R Q KNK +A + LR  +Y+ E QK   + +I
Sbjct: 245 ESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLRTFIYDREHQKY--VNDI 302

Query: 299 GESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               K+ +  G +   IR+Y   P   V D R           ++GD+ D + A    +
Sbjct: 303 ASRRKSLVSTGDRSAKIRTYNY-PQGRVTDHRIGFTTHDLPGFMNGDIQDMIDALTVAE 360


>gi|257463869|ref|ZP_05628255.1| peptide chain release factor 2 [Fusobacterium sp. D12]
          Length = 326

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 154/324 (47%), Positives = 216/324 (66%), Gaps = 1/324 (0%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           +   W +   +  L++        ++  + + + + +  +L+E     D+ S   E  + 
Sbjct: 2   EEGFWNDKKSSSALIKAMNEEKALLASFQSLVEEIEEEEVLIEFVEAGDE-SSQVELEEK 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
            +++  ++E      LL GE D N+A + +H+GAGGTE+ DWA+ML RMYTRW   +K+K
Sbjct: 61  HKQLLKDMESFSTGLLLDGEYDGNNAIVTIHSGAGGTEACDWADMLYRMYTRWCHDKKYK 120

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E ++   G+  GIKS T L+ G +AYG+LK E+G+HRLVRISP+D+N +RHTSF+S+ V
Sbjct: 121 IEEMDFMPGDSVGIKSITFLVSGYHAYGYLKCEKGIHRLVRISPFDANKKRHTSFASVEV 180

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P VD+S+E+E+  +D RIDTYRASGAGGQH+N TDSAVRITH PTG+VV CQ+ERSQ  
Sbjct: 181 VPEVDESVEVEVEAADIRIDTYRASGAGGQHINMTDSAVRITHFPTGIVVTCQKERSQLN 240

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+  A  ML++KL ELEL+K+EE     +  ++EIGWG QIRSYV QPY MVKD RT +E
Sbjct: 241 NRETAMKMLQSKLLELELKKKEEEMKKLQGEQSEIGWGSQIRSYVFQPYTMVKDHRTGVE 300

Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355
             +   V+DGDLD+FM   L   K
Sbjct: 301 VGNIKAVMDGDLDEFMNGYLRWNK 324


>gi|146277160|ref|YP_001167319.1| peptide chain release factor 1 [Rhodobacter sphaeroides ATCC 17025]
 gi|166223594|sp|A4WRK0|RF1_RHOS5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145555401|gb|ABP70014.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 351

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 119/342 (34%), Positives = 179/342 (52%), Gaps = 12/342 (3%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             V+R  FL  +           E   L RE   L   ++ I   +  L D      +  
Sbjct: 9   QIVRRFEFLEARLSAGAA---PAEIAALSREYAELKPVVAEIAAYRTALEDLAEAEAMLA 65

Query: 78  EEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           + +  ++ ++       RI    +  +   L    AD+  A LE+  G GG E+  +A  
Sbjct: 66  DPEMRALAEDELPRLRARIPEMEQALRLALLPRDAADARPAILEIRPGTGGEEAALFAGD 125

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           LLRMY R+AE + ++ E L++   E  GI+ AT  I+G  A+  LK E GVHR+ R+   
Sbjct: 126 LLRMYQRYAEAQGWRFELLDLAPSELGGIREATARIEGEGAFARLKYESGVHRVQRVPET 185

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           ++  R HTS +++ V P   + ++I I  +D RIDT R+SGAGGQHVNTTDSAVRITH+P
Sbjct: 186 EAQGRIHTSAATVAVLP-EAEEVDIAIPAADIRIDTMRSSGAGGQHVNTTDSAVRITHLP 244

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+VV    E+SQH+N+  A  +LRA+LY+LE Q+  E        K ++G G    +IR
Sbjct: 245 TGIVVTSS-EKSQHRNREIAMQVLRARLYDLERQRLAEAR--SADRKAQVGSGDRSERIR 301

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   + D R N+   +   ++ GDL + + A  A  +
Sbjct: 302 TYNF-PQGRMTDHRINLTLYALPQIMAGDLAEVIAALTAHDQ 342


>gi|254446350|ref|ZP_05059826.1| peptide chain release factor 1 [Verrucomicrobiae bacterium DG1235]
 gi|198260658|gb|EDY84966.1| peptide chain release factor 1 [Verrucomicrobiae bacterium DG1235]
          Length = 408

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 108/339 (31%), Positives = 177/339 (52%), Gaps = 12/339 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLELA 76
             R+  ++     P  + +   +  L RE+  L   I     +   + +L +N  +L+ +
Sbjct: 55  KARVEEIDGLMSAPDFYSDARRSAALSREQIKLRQLIEDYDALDKAKQQLAENQEMLDDS 114

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFE--SLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   L E        K+E   ++     +   E DS +  +E+ AGAGG E+  +A
Sbjct: 115 SGDAELKELAEMEIPELEEKVEKLEEKILKAMIPPDETDSRNTIVEIRAGAGGDEASLFA 174

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMYTR AE++ ++ E +   +    G K     I G   Y  LK E GVHR+ R+ 
Sbjct: 175 ADLYRMYTRLAERKGWRVEQMSASESGIDGFKEVIFSITGEEVYKKLKLESGVHRVQRVP 234

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + +++EI+  D  + T RASGAGGQHVNTTDSA+ I H
Sbjct: 235 ETESQGRIHTSTATVAVLP-EAEEVDVEINPQDLEVTTCRASGAGGQHVNTTDSAINIVH 293

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
            PTG+ V C  ERSQ KN+A+A  +L +++  L++++ EE +   E+ K ++G G    +
Sbjct: 294 KPTGITVYCADERSQIKNRAKAMKVLYSRI--LQVKQEEERSKYAENRKKQVGTGDRSER 351

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   + D R  +   S   V+DGD+++ ++  
Sbjct: 352 IRTYNF-PQSRLTDHRIGLTLHSLPAVMDGDMEEILETL 389


>gi|322387784|ref|ZP_08061393.1| peptide chain release factor RF1 [Streptococcus infantis ATCC
           700779]
 gi|321141651|gb|EFX37147.1| peptide chain release factor RF1 [Streptococcus infantis ATCC
           700779]
          Length = 359

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 161/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E       +    QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350


>gi|260914424|ref|ZP_05920893.1| peptide chain release factor RF2 [Pasteurella dagmatis ATCC 43325]
 gi|260631525|gb|EEX49707.1| peptide chain release factor RF2 [Pasteurella dagmatis ATCC 43325]
          Length = 248

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 150/247 (60%), Positives = 191/247 (77%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D+ D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AGIK
Sbjct: 1   MFSGQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +
Sbjct: 61  SATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITHIP+G+VVQCQ +RSQHKNK Q    L+AKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNDRSQHKNKDQCMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +ELQK+       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F
Sbjct: 181 MELQKKNADKQAMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRF 239

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 240 IEASLKA 246


>gi|49475009|ref|YP_033050.1| peptide chain release factor 1 [Bartonella henselae str. Houston-1]
 gi|61214620|sp|Q6G5T7|RF1_BARHE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|49237814|emb|CAF27009.1| Peptide chain release factor 1 [Bartonella henselae str. Houston-1]
          Length = 359

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 121/347 (34%), Positives = 183/347 (52%), Gaps = 18/347 (5%)

Query: 18  NAVQRLSFLNTKTE-DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   + ++   +P    N      L  E   L   +S I+ +     +   L  + 
Sbjct: 11  QLEKRFEIIESQMAKNP----NAEIYVKLASEYAELQPIVSSIRALNALYGEITDLETII 66

Query: 77  LEEDDCSILQETSDN-----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            ++     ++  +        Q+++   +  Q   L    AD   A +E+ AG GG+E+ 
Sbjct: 67  SDKLTDVEMRTLAQEELPLLCQKMEQLEQKLQILLLPKDVADEKSAIVEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A  R +K E + +++GE  G K     I G   +  LK E GVHR+ 
Sbjct: 127 LFAGDLFRMYERYAASRNWKVEVVSLNEGEVGGYKEIIATISGRGVFSKLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAVR
Sbjct: 187 RIPETETGGRIHTSAATVAVLP-EAEEIDIEIRPEDIRIDTMRASGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG++V  Q E+SQH+N+A+A  +LRA+L+++E QK         S K+++G G  
Sbjct: 246 ITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQK--AENERSASRKSQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R N+       VL+GDLD+ + A ++  +
Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLYKLDRVLEGDLDELIHALISDHQ 348


>gi|126462320|ref|YP_001043434.1| peptide chain release factor 1 [Rhodobacter sphaeroides ATCC 17029]
 gi|166223593|sp|A3PJZ6|RF1_RHOS1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|126103984|gb|ABN76662.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 351

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 115/342 (33%), Positives = 180/342 (52%), Gaps = 12/342 (3%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             V+R  FL  +           E   L RE   L   ++ I   +  L D      +  
Sbjct: 9   QIVRRFEFLEARLSAGAA---PAEIAALSREYAELKPVVAEISAYRTALEDLAEAEAMLS 65

Query: 78  EEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           + +  ++ ++    L+       +  +   L    AD+  A LE+  G GG E+  +A  
Sbjct: 66  DPEMRALAEDEIPALRARIPGMEQALRLALLPKDAADARPAILEIRPGTGGEEAALFAGD 125

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           LLRMY R+AE + ++ E L++   E  GI+ AT  ++G  A+  LK E GVHR+ R+   
Sbjct: 126 LLRMYQRYAEGQGWRFELLDLAPSELGGIREATARVEGEGAFARLKYESGVHRVQRVPET 185

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           ++  R HTS +++ V P   + +++EI  +D RIDT R+SGAGGQHVNTTDSAVRITH+P
Sbjct: 186 EAQGRIHTSAATVAVLP-EAEEVDLEIPAADIRIDTMRSSGAGGQHVNTTDSAVRITHLP 244

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG++V    E+SQH+N+  A  +LRA+LY+LE Q+  +        K ++G G    +IR
Sbjct: 245 TGIIVTSS-EKSQHRNREIAMQVLRARLYDLERQRLADAR--SADRKAQVGSGDRSERIR 301

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   + D R N+   +   ++ GDL + + A  A  +
Sbjct: 302 TYNF-PQGRMTDHRINLTLYALPQIMAGDLSEVISALTAHDQ 342


>gi|270292697|ref|ZP_06198908.1| peptide chain release factor 1 [Streptococcus sp. M143]
 gi|270278676|gb|EFA24522.1| peptide chain release factor 1 [Streptococcus sp. M143]
          Length = 359

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 161/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIIDAEEM 66

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E       +    QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKSEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|189485187|ref|YP_001956128.1| peptide chain release factor 1 [uncultured Termite group 1
           bacterium phylotype Rs-D17]
 gi|238054475|sp|B1GZI5|RF1_UNCTG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|170287146|dbj|BAG13667.1| peptide chain release factor 1 [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 356

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 107/356 (30%), Positives = 176/356 (49%), Gaps = 19/356 (5%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KE 61
            +L  L  +F           + +K  D  +  N  E + L ++  +L           +
Sbjct: 4   EKLKLLNSIF---------EEVESKLSDLSVISNQEEYRELTKQHFYLRPLAEKYIRYSK 54

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           + + + D   L +    E       E ++ +++        +   + +   +  +  +E+
Sbjct: 55  LLNEIKDAEELQKSKDAEMKEIAFAEYNNLIEKRNQMENEIKVLLIPTDPNEDKNIIVEI 114

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG GG E+  +   L  MYTR+AE+  +K E L  +     G K     I G   +   
Sbjct: 115 RAGTGGNEAALFVGDLYGMYTRFAERNGWKYEVLGSNPTGLGGYKEVVFEINGGKVWRCF 174

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E+G HR+ R+   +++ R HTS +++ V P   + +++EI   D RIDTYRASGAGGQ
Sbjct: 175 KFERGAHRVQRVPETEASGRVHTSAATVAVLP-EAEEVDVEIKMEDLRIDTYRASGAGGQ 233

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N TDSA+RITH+PTG+VV CQ ERSQ KN+A+A+ +LRAK+Y  E +  E    +   
Sbjct: 234 HINKTDSAIRITHLPTGLVVACQDERSQIKNRAKAFKVLRAKIY--EQRILEHEMRLSSE 291

Query: 302 SKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            K +IG G    +IR+Y   P   + D R      + ++V+DG+L + +   +   
Sbjct: 292 RKQQIGSGDRSEKIRTYNF-PQNRITDHRIGYSVYNITEVMDGNLSELVNKLIKAD 346


>gi|149371331|ref|ZP_01890817.1| peptide chain release factor RF-2 [unidentified eubacterium SCB49]
 gi|149355469|gb|EDM44028.1| peptide chain release factor RF-2 [unidentified eubacterium SCB49]
          Length = 317

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 139/308 (45%), Positives = 202/308 (65%), Gaps = 2/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+  +     ++  +E      D  ++ E   E +  +   E           +E  +F 
Sbjct: 1   MKVLRSKKKWVTDYEEATTLFEDAEVIYEFFKEGEAPAENVEERYKKAF--EAIEALEFR 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LS E D+  A L++ AGAGGTES DWANML+RMY  WAE+  FK + L    G+ AGI
Sbjct: 59  NMLSEEGDAMSAVLQITAGAGGTESCDWANMLMRMYLMWAERNGFKVKELNYQAGDVAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ TL I G  A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+ DD+IEI+I+ 
Sbjct: 119 KTVTLEIDGEYAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLADDTIEIDINP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +D   D  R+ GAGGQ+VN  ++   +TH P+G+V+   + RSQ +N+ +A  ML+++LY
Sbjct: 179 ADIGWDFARSGGAGGQNVNKVETKAILTHKPSGIVIHNSETRSQLENRQKAMQMLKSQLY 238

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+K++      E +K  I WG QIR+YVLQPY++VKD+R N E T+P  +LDG +D+
Sbjct: 239 EIELRKQQAQRAEIEGNKMAIEWGSQIRNYVLQPYKLVKDVRNNHESTNPDAILDGHIDE 298

Query: 346 FMKATLAI 353
           F+KA L +
Sbjct: 299 FLKAYLMM 306


>gi|309803264|ref|ZP_07697361.1| peptide chain release factor 1 [Lactobacillus iners LactinV 11V1-d]
 gi|309805669|ref|ZP_07699710.1| peptide chain release factor 1 [Lactobacillus iners LactinV 09V1-c]
 gi|309806347|ref|ZP_07700360.1| peptide chain release factor 1 [Lactobacillus iners LactinV 03V1-b]
 gi|309809934|ref|ZP_07703782.1| peptide chain release factor 1 [Lactobacillus iners SPIN 2503V10-D]
 gi|312871919|ref|ZP_07732001.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2062A-h1]
 gi|312873839|ref|ZP_07733882.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2052A-d]
 gi|329921112|ref|ZP_08277635.1| peptide chain release factor 1 [Lactobacillus iners SPIN 1401G]
 gi|308164772|gb|EFO67022.1| peptide chain release factor 1 [Lactobacillus iners LactinV 11V1-d]
 gi|308165029|gb|EFO67271.1| peptide chain release factor 1 [Lactobacillus iners LactinV 09V1-c]
 gi|308167331|gb|EFO69497.1| peptide chain release factor 1 [Lactobacillus iners LactinV 03V1-b]
 gi|308169722|gb|EFO71767.1| peptide chain release factor 1 [Lactobacillus iners SPIN 2503V10-D]
 gi|311090621|gb|EFQ49022.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2052A-d]
 gi|311092496|gb|EFQ50858.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2062A-h1]
 gi|328935019|gb|EGG31508.1| peptide chain release factor 1 [Lactobacillus iners SPIN 1401G]
          Length = 362

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 95/342 (27%), Positives = 167/342 (48%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ +     L     DP +  +  +   + +E   L   +   K   +   +     E+
Sbjct: 8   LESLLAHYEELQEMMSDPEVINDTKKYMEISKEEADLREVVEKYKLFCNDQSEIANNKEI 67

Query: 76  ALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  ++    +      + +    E  +   L     D  D  +E+   AGG E+ 
Sbjct: 68  ISHESDSDLIDMAKEENIALEEEVNKLEEEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE + ++   ++  + E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYQKYAENQGWQMSIIDAEETEVGGFKRVAVMISGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + +++++   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMP-EYEQVDLDLDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    + +  A+     K  +G G  
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDFYESQNQ--ASYDAKRKESVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   V D R  +       +++G+L+D + A 
Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELEDIISAL 345


>gi|259501685|ref|ZP_05744587.1| peptide chain release factor RF1 [Lactobacillus iners DSM 13335]
 gi|302191107|ref|ZP_07267361.1| peptide chain release factor 1 [Lactobacillus iners AB-1]
 gi|309808088|ref|ZP_07702006.1| peptide chain release factor 1 [Lactobacillus iners LactinV 01V1-a]
 gi|312874655|ref|ZP_07734679.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2053A-b]
 gi|315653748|ref|ZP_07906668.1| peptide chain release factor RF1 [Lactobacillus iners ATCC 55195]
 gi|325913047|ref|ZP_08175420.1| peptide chain release factor 1 [Lactobacillus iners UPII 60-B]
 gi|259166970|gb|EEW51465.1| peptide chain release factor RF1 [Lactobacillus iners DSM 13335]
 gi|308168690|gb|EFO70790.1| peptide chain release factor 1 [Lactobacillus iners LactinV 01V1-a]
 gi|311089885|gb|EFQ48305.1| peptide chain release factor 1 [Lactobacillus iners LEAF 2053A-b]
 gi|315489110|gb|EFU78752.1| peptide chain release factor RF1 [Lactobacillus iners ATCC 55195]
 gi|325477727|gb|EGC80866.1| peptide chain release factor 1 [Lactobacillus iners UPII 60-B]
          Length = 362

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 95/342 (27%), Positives = 167/342 (48%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ +     L     DP +  +  +   + +E   L   +   K   +   +     E+
Sbjct: 8   LESLLAHYEELQEMMSDPEVINDTKKYMEISKEEADLREVVEKYKLFCNDQSEIANNKEI 67

Query: 76  ALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  ++    +      + +    E  +   L     D  D  +E+   AGG E+ 
Sbjct: 68  ISHESDSDLIDMAKEENIALEEEVTKLEEEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE + ++   ++  + E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYQKYAENQGWQMSIIDAEETEVGGFKRVAVMISGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + +++++   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMP-EYEQVDLDLDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    + +  A+     K  +G G  
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDFYESQNQ--ASYDAKRKESVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   V D R  +       +++G+L+D + A 
Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELEDIISAL 345


>gi|221134749|ref|ZP_03561052.1| Protein chain release factor B, RF-2 [Glaciecola sp. HTCC2999]
          Length = 248

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 150/246 (60%), Positives = 190/246 (77%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + +   D ND YL++ +G+GGTE+QDWANMLLRMY RW E+  FKTE +E+ DG+ AGIK
Sbjct: 1   MFAKPNDGNDCYLDIQSGSGGTEAQDWANMLLRMYLRWGEENGFKTELIEVSDGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+   G  A+GWL+ E GVHRLVR SP+DS +RRHTSF+S ++YP ++D I+I+I+ S
Sbjct: 61  SATIRFGGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASAFIYPEINDDIDIDINPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYRASGAGGQHVN TDSAVRITH+PT +VVQCQ +RSQHKNK QA+  L+AKLYE
Sbjct: 121 DLRIDTYRASGAGGQHVNRTDSAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            ELQK+ E     E SK++IGWG QIRSYVL     +KDLRT +E  +   VLDG+L+ F
Sbjct: 181 YELQKQNEEKQAMEDSKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGNLNKF 239

Query: 347 MKATLA 352
           ++A+L 
Sbjct: 240 IEASLK 245


>gi|240949505|ref|ZP_04753845.1| peptide chain release factor 2 [Actinobacillus minor NM305]
 gi|240296078|gb|EER46739.1| peptide chain release factor 2 [Actinobacillus minor NM305]
          Length = 248

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 146/247 (59%), Positives = 189/247 (76%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D+ D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+K
Sbjct: 1   MFSGQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP VD+ I IE++ +
Sbjct: 61  SATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEVDEDINIEVNPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITHIP+G+VVQCQ  RSQH+NK QA   L+AKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNGRSQHQNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +E+ K+       E SK++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F
Sbjct: 181 MEMMKQNAEKQAMEESKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKF 239

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 240 IEASLKA 246


>gi|297520245|ref|ZP_06938631.1| peptide chain release factor 2 [Escherichia coli OP50]
          Length = 248

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 156/247 (63%), Positives = 187/247 (75%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE DS D YL++ AG+GGTE+QDWA+ML RMY RWAE R FKTE +E  +GE AGIK
Sbjct: 1   MFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           S T+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+IEI+ +
Sbjct: 61  SVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           LE+QK+       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F
Sbjct: 181 LEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQF 239

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 240 IEASLKA 246


>gi|212550858|ref|YP_002309175.1| peptide chain release factor 1 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212549096|dbj|BAG83764.1| peptide chain release factor 1 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 359

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 103/346 (29%), Positives = 172/346 (49%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   +     +P    ++     L +E + L+       + +  L + +    +
Sbjct: 8   LDILIIRFEEIGKLISNPDSITDMKRFVKLNKEYRELEKISLIRDQYKQTLINIIDAQTI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +E D  + +   + L+     +   +       +     D  +A +E+ +G GG E+ 
Sbjct: 68  LEKESDKILREIAKEELEESTSLLNQLEKKIKLLLIPIDPQDGKNAIVEIRSGTGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MY+++ E + +K       +G   G K     + G N Y  LK E GVHR+ 
Sbjct: 128 LFAGDLYKMYSKYCESKGWKIAVTSSSEGTIGGFKEIIFTVNGENVYSTLKYESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V+P     ++IEI ESD R DT+ +SG GGQ VNTT SA+R
Sbjct: 188 RVPITETQGRIHTSAATVAVFP-EAKDVDIEIKESDIRTDTFCSSGPGGQSVNTTYSAIR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +THIPTG+VVQCQ ERSQ KNK +A   LR+++Y +E QK+ +   +    KT +  G +
Sbjct: 247 LTHIPTGIVVQCQDERSQLKNKEKAMTELRSRIYNIEYQKQIDETAL--KRKTMVSTGDR 304

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              IR+Y   P   V D R N    +    L+G++ +F+   +  +
Sbjct: 305 SAKIRTYNY-PQGRVTDHRINYTTYNLLTFLEGNIQEFINQLIIAE 349


>gi|126697059|ref|YP_001091945.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9301]
 gi|166223586|sp|A3PF19|RF1_PROM0 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|126544102|gb|ABO18344.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT
           9301]
          Length = 364

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 100/348 (28%), Positives = 168/348 (48%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
              A +    L  +  DP +  +  + + + RER  L+  +    ++ D   +      L
Sbjct: 10  LKTASESFENLEVQLADPDIANDPKKLESIARERSKLEPLVLDFNKLLDTDKEIEDSKNL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130
             E  +   ++   +       E + +  +            D     LE+ AGAGG E+
Sbjct: 70  LKENRNDKEMESLINEELITLEESKSELIQKTTIALLPKDPRDERSVMLEIRAGAGGNEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+ +K  +  + +   + +  G K   + +KG + Y  LK E GVHR+
Sbjct: 130 CIWAGDLARMYERYGQKIGWSVKPVSASESDMGGFKELVISVKGDSVYSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +E++I  +D  + T R+ GAGGQ+VN  ++A+
Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADPVEVKIDPTDLEVGTARSGGAGGQNVNKVETAI 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C QERSQ +N+ +A  +LRAKLYE++L+  E  A       +++G G 
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLK--EANAKERSQRLSQVGTGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R      S   +L G LD+ + A +A ++
Sbjct: 307 RSEKIRTYNFKD-NRTTDHRLG-SNFSLEPILAGQLDEVINACIAQEQ 352


>gi|119358446|ref|YP_913090.1| peptide chain release factor 1 [Chlorobium phaeobacteroides DSM
           266]
 gi|166223545|sp|A1BJT9|RF1_CHLPD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119355795|gb|ABL66666.1| bacterial peptide chain release factor 1 (bRF-1) [Chlorobium
           phaeobacteroides DSM 266]
          Length = 357

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 106/352 (30%), Positives = 180/352 (51%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD      ++   L  +  DPH  ++    + L +E + L + +               
Sbjct: 1   MFDKLQAIKEKHEDLEQQLLDPHAAEDQNRFRKLNKEYRDLCSIVEAYDRYALAKKQLEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAGG 127
              L   E +  +     D +  ++  +  ++ +  L      E DS +  +E+ AG GG
Sbjct: 61  SRLLLKNEKEQDMRAMVQDEISSLQESILEREKQLKLLLLPKDEVDSRNVIIEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPNAYGWLKGEQG 186
            E+  +A  L+RMY R+AE++ +K E L+ ++     G +   L + G + YG +K E G
Sbjct: 121 EEAALFAADLVRMYQRFAEQQGWKYEVLDFNESSVPGGFREIVLGVSGHDVYGTMKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +S+ V P   + +++EI + D R DTYR+ G GGQ+VN  
Sbjct: 181 VHRVQRVPDTETQGRIHTSAASVAVLP-EAEEVDVEIRKDDLRFDTYRSGGKGGQNVNKV 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++AVRITH P+G+VV CQ+ERSQ +NK +A  MLRAKLY+ +L +++E        ++ +
Sbjct: 240 ETAVRITHQPSGIVVACQEERSQLQNKERAMKMLRAKLYDRQLAEQQEKRAGL--RRSMV 297

Query: 307 GWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             G +   IR+Y   P   V D R      +   ++ GD+ D ++A     +
Sbjct: 298 TTGDRSAKIRTYNY-PQSRVTDHRIGFTSHALPQIMQGDIKDIIEALKMHDQ 348


>gi|239787352|emb|CAX83829.1| Peptide chain release factor RF-1 [uncultured bacterium]
          Length = 354

 Score =  210 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 115/345 (33%), Positives = 176/345 (51%), Gaps = 11/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  ++R   L  + E      +  +   L +E   L+N    I   +  L        +
Sbjct: 7   LDQIIERYLDLQKQLEQE--VCDPKKFAGLSKEYAGLENIYQTILNYKSLLQQKADAEIM 64

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +     + +E         +   +  +   L     D   A LE+ AG GG E+  +A
Sbjct: 65  LTDPGMRQLAEEELGALKLATEETWQMLRVLLLPKDVDDERSAILEIRAGTGGDEAGLFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L+RMY R+A    ++ + L + +     +K A + I G   +  LK E GVHR+ R+ 
Sbjct: 125 ADLMRMYQRYAAIHGWQFDVLGLSETGLGSVKEAQVGIVGKGVFAKLKFESGVHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S+ R HTS +++ V P   + ++IEI + D RID  RASGAGGQHVNTTDSAVR+TH
Sbjct: 185 ETESSGRVHTSAATVAVLP-EVEDVDIEIKDEDLRIDICRASGAGGQHVNTTDSAVRLTH 243

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV  Q ERSQHKNKA+A  ++RA+LY+L  +KRE+        K+++G G    +
Sbjct: 244 LPTGLVVAQQDERSQHKNKAKAMKIMRARLYDL--RKREQDEVRAADRKSQVGSGDRSER 301

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           IR+Y   P   V D R N+       V+ G+ LD+ +   +A  +
Sbjct: 302 IRTYNF-PQGRVTDHRINLTLYKLDQVMQGEALDELIDNLIADDQ 345


>gi|325911742|ref|ZP_08174149.1| peptide chain release factor 1 [Lactobacillus iners UPII 143-D]
 gi|325476508|gb|EGC79667.1| peptide chain release factor 1 [Lactobacillus iners UPII 143-D]
          Length = 362

 Score =  210 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 95/342 (27%), Positives = 167/342 (48%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ +     L     DP +  +  +   + +E   L   +   K   +   +     E+
Sbjct: 8   LESLLAHYEELQEMMSDPEVINDTKKYMEISKEEADLREVVEKYKLFCNDQSEIANNKEI 67

Query: 76  ALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  ++    +      + +    E  +   L     D  D  +E+   AGG E+ 
Sbjct: 68  ISHESDSDLIDMAKEENIALEEEVTKLEEEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE + ++   ++  + E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYQKYAENQGWQMSIIDSEETEVGGFKRVAVMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + +++++   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMP-EYEQVDLDLDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    + +  A+     K  +G G  
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDFYESQNQ--ASYDAKRKESVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   V D R  +       +++G+L+D + A 
Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELEDIISAL 345


>gi|312871649|ref|ZP_07731741.1| peptide chain release factor 1 [Lactobacillus iners LEAF 3008A-a]
 gi|311092874|gb|EFQ51226.1| peptide chain release factor 1 [Lactobacillus iners LEAF 3008A-a]
          Length = 362

 Score =  210 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 95/342 (27%), Positives = 167/342 (48%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ +     L     DP +  +  +   + +E   L   +   K   +   +     E+
Sbjct: 8   LESLLAHYEELQEMMSDPEVINDTKKYMEISKEEADLREVVEKYKLFCNDQSEIANNKEI 67

Query: 76  ALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  ++    +      + +    E  +   L     D  D  +E+   AGG E+ 
Sbjct: 68  ISHESDSDLIDMAKEENIALEEEVNKLEEEIKILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE + ++   ++  + E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYQKYAENQGWQMSIIDSEETEVGGFKRVAVMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + +++++   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMP-EYEQVDLDLDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    + +  A+     K  +G G  
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDFYESQNQ--ASYDAKRKESVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   V D R  +       +++G+L+D + A 
Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGELEDIISAL 345


>gi|114704325|ref|ZP_01437233.1| peptide chain release factor 1 [Fulvimarina pelagi HTCC2506]
 gi|114539110|gb|EAU42230.1| peptide chain release factor 1 [Fulvimarina pelagi HTCC2506]
          Length = 359

 Score =  210 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 120/348 (34%), Positives = 180/348 (51%), Gaps = 16/348 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R + L           +      L  E   L+  ++ I+E +    +      L
Sbjct: 9   LDEILARFTRLEMDMAKG---PDHEVYSKLAAEYASLEEVVAAIREFRALETELADAESL 65

Query: 76  ALEEDDCSILQE-----TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             + +    ++        D   R +      Q   L    AD   A LE+ AG GG+E+
Sbjct: 66  LDDPESDREMRNLAGVEVDDLRSRREGLRGRIQILLLPKDSADEKGAILEIRAGTGGSEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+AE  ++K E L   +GE  G K     IKG   +  LK E GVHR+
Sbjct: 126 GLFAGDLYRMYQRYAELNRWKVELLSASEGEVGGFKEVIAAIKGNGVFSRLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + I+I++   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 186 QRVPETESGGRIHTSAATVAVLP-EAEDIDIDVRNEDIRIDTMRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VV    E+SQH+N+AQA  +L+AKLY++E QK ++  +     K+++G G 
Sbjct: 245 RITHLPTGIVVTSS-EKSQHQNRAQAMQVLKAKLYDMERQKYDDERSAA--RKSQVGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V++G++++ + A +A  +
Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDKVIEGEMEELVDALVADHQ 348


>gi|306829484|ref|ZP_07462674.1| peptide chain release factor RF1 [Streptococcus mitis ATCC 6249]
 gi|307708639|ref|ZP_07645102.1| peptide chain release factor 1 [Streptococcus mitis NCTC 12261]
 gi|315613125|ref|ZP_07888035.1| peptide chain release factor RF1 [Streptococcus sanguinis ATCC
           49296]
 gi|322376710|ref|ZP_08051203.1| peptide chain release factor 1 [Streptococcus sp. M334]
 gi|304428570|gb|EFM31660.1| peptide chain release factor RF1 [Streptococcus mitis ATCC 6249]
 gi|307615213|gb|EFN94423.1| peptide chain release factor 1 [Streptococcus mitis NCTC 12261]
 gi|315314687|gb|EFU62729.1| peptide chain release factor RF1 [Streptococcus sanguinis ATCC
           49296]
 gi|321282517|gb|EFX59524.1| peptide chain release factor 1 [Streptococcus sp. M334]
          Length = 359

 Score =  210 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 161/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E       +    QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|227873770|ref|ZP_03991999.1| peptide chain release factor RF1 [Oribacterium sinus F0268]
 gi|227840386|gb|EEJ50787.1| peptide chain release factor RF1 [Oribacterium sinus F0268]
          Length = 358

 Score =  210 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 114/351 (32%), Positives = 185/351 (52%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +   +    +      P +  ++ + K L+ E+  L+         +        
Sbjct: 1   MFENLEEVKKHYEEIMHNLTIPEVVSDISQYKKLILEQTSLEPIYKAYLAFRKAEQSEEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVE----YKQFESLLSGEADSNDAYLEVHAGAGG 127
            L L   E D  IL+   + LQ+ K + E      Q   L   E D  +  +E+  GAGG
Sbjct: 61  ALSLLDNEKDKEILEMAKEELQQAKEDQERLTKEIQLLLLPKDENDDKNIVMEIRGGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYT +AEKR +KTE +  ++    G+K    ++ G  AY  LK E GV
Sbjct: 121 EEAALFAGSLYRMYTSYAEKRGWKTELVSFNETGLGGLKEVVFIVDGHGAYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS +++ V P   + +++EI+ +D R++ +R+SGAGGQH+N T 
Sbjct: 181 HRVQRVPETESGGRIHTSTATVAVMP-EVEDVQVEINPADVRMEVFRSSGAGGQHINKTS 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+ H PTG+V +CQ+ERSQ +N+ +A  +LRA+LYE+EL+K++         ++++G
Sbjct: 240 SAVRLIHEPTGLVAECQEERSQVQNREKAMRLLRARLYEIELEKQQSEN--AAEKRSQLG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P   V D R  +   +   VL GDLD  +   +   +
Sbjct: 298 TGDRSEKIRTYNF-PQGRVTDHRIKLTLYNIDAVLSGDLDLLIDPLITEDQ 347


>gi|227548000|ref|ZP_03978049.1| peptide chain release factor 1 [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227079906|gb|EEI17869.1| peptide chain release factor 1 [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 357

 Score =  210 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 110/346 (31%), Positives = 178/346 (51%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V     +  +  DP +  +  + + L +    L   I+   E+ +   +     E+
Sbjct: 8   VDDYVSEYEGIQAQMGDPDVAGDAEQFRKLSKRYAELQPIINVYNELSEARENYEAAKEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E+ + +      +       E            E D +D  +E+ AGAGG E+  +A 
Sbjct: 68  ASEDKEFAEEAVRLEGDIARLEEELADLL--APRDEHDGDDIIMEIKAGAGGEEAALFAG 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190
            L RMY ++ EK     E L++ + +  G K  T+ +K        A+  LK E GVHR+
Sbjct: 126 DLARMYQKYCEKNGLSWEVLDLAESDLGGAKDMTVAVKSKTPSRDGAWSKLKFEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R  TS + ++V+P  ++   ++I E D RID YR+SG GGQ VNTTDSAV
Sbjct: 186 QRVPVTESQGRIQTSAAGVYVFPEAEEVASVDIDEKDLRIDVYRSSGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PT +VV CQ ERSQ +N+A+A  +L+A+L +LE +K +  A  G +S+   +   
Sbjct: 246 RITHLPTNIVVTCQNERSQIQNRARAMQVLQARLDQLEREKADAEAAEGRASQVRTMDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N +  +   VLDG++D+ + A    ++
Sbjct: 306 ERIRTYNW-PENRISDHRINYKANNLDSVLDGNMDELISALQKHER 350


>gi|320354565|ref|YP_004195904.1| peptide chain release factor 1 (bRF-1) [Desulfobulbus propionicus
           DSM 2032]
 gi|320123067|gb|ADW18613.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfobulbus
           propionicus DSM 2032]
          Length = 356

 Score =  210 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 110/344 (31%), Positives = 176/344 (51%), Gaps = 13/344 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCD 68
           +FD   +  ++L  L  +  DP L  +    + ++RE  ++             + ++  
Sbjct: 1   MFDNLRDIDEKLGVLERQLADPQLVSDQQRYREIVREHANVAKIAELYAAYTNVRAQIAG 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYK--QFESLLSGEADSNDAYLEVHAGAG 126
           N  L+    ++ D   L +       +K     +  +   L     D  + +LE+ AG G
Sbjct: 61  NQELIRTEQDDPDLVELAKAEIEELVVKQTELEQAIRIRLLPKDPNDDKNIFLEIRAGTG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +   L RMY+R+AE + +K E +  +     G K    L+ G   Y  LK E G
Sbjct: 121 GDEAALFVADLFRMYSRYAEMQGWKVEVMSSNPIGIGGFKELIALVSGTQVYSRLKYESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS  ++ + P   + +++ I  ++ + D YR+SG GGQ VNTT
Sbjct: 181 VHRVQRVPDTETQGRIHTSAVTVAIIP-EAEEVDLHIEPNELKFDVYRSSGPGGQSVNTT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVR+TH+PTG+VV CQ E+SQHKNKA+A  +LRA+L +   Q+R +   I E  K+++
Sbjct: 240 DSAVRVTHLPTGLVVTCQDEKSQHKNKAKALQVLRARLLDKMEQERHD--RISEERKSQV 297

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           G G    +IR+Y   P   V D R N+       V+ G LDD +
Sbjct: 298 GSGDRSERIRTYNF-PQGRVTDHRINLTLYRLDQVMAGMLDDII 340


>gi|315222986|ref|ZP_07864865.1| peptide chain release factor 1 [Streptococcus anginosus F0211]
 gi|315187936|gb|EFU21672.1| peptide chain release factor 1 [Streptococcus anginosus F0211]
          Length = 359

 Score =  210 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 99/348 (28%), Positives = 160/348 (45%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVATYREYKRVLQNITDAEEM 66

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +       +    QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + +K E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 SLFAGDLLTMYQKYAESQGWKFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D RID Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEIVDALVLYDQ 350


>gi|78778239|ref|YP_394554.1| peptide chain release factor 1 [Sulfurimonas denitrificans DSM
           1251]
 gi|119361635|sp|Q30NW2|RF1_SULDN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78498779|gb|ABB45319.1| bacterial peptide chain release factor 1 (bRF-1) [Sulfurimonas
           denitrificans DSM 1251]
          Length = 355

 Score =  210 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 109/341 (31%), Positives = 176/341 (51%), Gaps = 9/341 (2%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           + R + L      P +  ++     L +ER  L+  +   +E +  +       E+  + 
Sbjct: 10  INRYNELGEMLSSPDITSDIKRMTTLSKERSSLEKIVEKAQEYKSVISQINDTKEMLYDA 69

Query: 80  DDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +   + +E    L+    +     +   L     D  +  +E+ AGAGG E+  +   L 
Sbjct: 70  EMAEMAKEELKELEIQIPILENDIKLLLLPKDPNDDRNIIVELRAGAGGDEAAIFVGNLF 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
             YTR+A+ + +K E L     +  G K    LI+G   Y  LK E G HR+ R+   +S
Sbjct: 130 EAYTRYADLKDWKVEILSSSPSDAGGYKEIIALIRGEQVYSRLKYEGGTHRVQRVPATES 189

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS  ++ V P   D +EI+I+E+D +ID  R+SG GGQ VNTTDSAVRITH+PTG
Sbjct: 190 QGRVHTSAITVAVMP-EVDDVEIQINENDLKIDVMRSSGCGGQSVNTTDSAVRITHLPTG 248

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSY 315
           +VV  Q ++SQHKNK +A  +L+A+LY+LE+Q  E IA    +   ++G G    +IR+Y
Sbjct: 249 LVVTNQDQKSQHKNKEKAMKVLKARLYDLEMQ--EAIAKDSANRSAQVGTGDRSGRIRTY 306

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLAIKK 355
              P   + D R  +     ++++ G L D+ ++  +A  +
Sbjct: 307 NY-PQNRMSDHRITLTLYRLAEIMQGGLMDEIIEPLIADHQ 346


>gi|309800291|ref|ZP_07694464.1| peptide chain release factor 1 [Streptococcus infantis SK1302]
 gi|308116075|gb|EFO53578.1| peptide chain release factor 1 [Streptococcus infantis SK1302]
          Length = 359

 Score =  210 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 161/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIIDAEEM 66

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E       +    QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|323356873|ref|YP_004223269.1| protein chain release factor A [Microbacterium testaceum StLB037]
 gi|323273244|dbj|BAJ73389.1| protein chain release factor A [Microbacterium testaceum StLB037]
          Length = 368

 Score =  210 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 105/353 (29%), Positives = 170/353 (48%), Gaps = 15/353 (4%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
           G+F+     +     +  +  DP +  +   AK + R    L+  +   +       D  
Sbjct: 10  GIFESVRGLIDEHREIELELNDPAVHADAARAKRVNRRYAELNRIVHAYQAWVSASDDLE 69

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
              ELA E++  +      +         E  +   +     D+ D  +E+  G GG ES
Sbjct: 70  AARELAREDEAFAAEIPALEERVS--ETQERLRRLLIPRDPDDARDVIMEIKGGEGGAES 127

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI------KGPNAYGWLKGE 184
             +A  LLRMY ++A    +KTE LE  + +  G K   + I           +  LK E
Sbjct: 128 ALFAADLLRMYLQYAASMGWKTELLERTESDLGGYKDVQVAIKGSSSDPAQGVWAHLKYE 187

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS + + V+P VD+  E+ I  +D +ID +R+SG GGQ VN
Sbjct: 188 GGVHRVQRVPATESQGRIHTSTTGVLVFPEVDEPEEVAIDPNDLKIDVFRSSGPGGQSVN 247

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRITH+PTG+VV  Q E+SQ +N+     +LRA+L   + ++R+ +A      ++
Sbjct: 248 TTDSAVRITHVPTGIVVSMQNEKSQLQNREAGMRVLRARLLAKQQEERDAVAADA--RRS 305

Query: 305 EI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +I       +IR+Y   P   + D RT  +  +   V+DG L   +++ +   
Sbjct: 306 QIRGMDRSERIRTYNF-PENRIADHRTGYKAYNLDQVMDGALGPIIESAITAD 357


>gi|307709438|ref|ZP_07645895.1| peptide chain release factor 1 [Streptococcus mitis SK564]
 gi|307619752|gb|EFN98871.1| peptide chain release factor 1 [Streptococcus mitis SK564]
          Length = 359

 Score =  210 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 161/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E       +    QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKVEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASINGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|317052432|ref|YP_004113548.1| peptide chain release factor 1 [Desulfurispirillum indicum S5]
 gi|316947516|gb|ADU66992.1| peptide chain release factor 1 [Desulfurispirillum indicum S5]
          Length = 355

 Score =  210 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 186/347 (53%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72
             +   R   L+ +   P    +    +   RE   L   +   ++ +     L DN  +
Sbjct: 5   LQDIEDRYELLSAELSHPGATADTQRLQQATRELSELREVVEAFQQFKTVRRELADNQEM 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQ 131
           L    + +   ++Q+   +L+  + ++E    E L      D+ +  LE+ AG GG E+ 
Sbjct: 65  LTSEKDRELREMIQQEIQSLRHQEQQLEDTLTELLLPRDPNDTKNIILEIRAGTGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+A++R +K E L +++    G +    +I+G N Y  LK E G HR+ 
Sbjct: 125 LFATDLFRMYSRYADERGWKVEVLSVNETGNGGFREIISMIEGRNVYSRLKFESGTHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S+ R HTS  ++ V P   + ++I+I+ +D RID YR+SGAGGQHVNTTDSAVR
Sbjct: 185 RVPQTESSGRIHTSAVTVAVLP-EAEEVDIDINPADLRIDVYRSSGAGGQHVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTGV V CQ+ RSQHKNK +A ++LR++L +  +Q+    +   +  K ++G G  
Sbjct: 244 VTHIPTGVSVACQEGRSQHKNKEKALSILRSRLLDHAVQQ--SDSQRSQDRKLQVGSGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R N+       VL+GDLD+ +       +
Sbjct: 302 SERIRTYNF-PQGRVTDHRVNLTLHRLEQVLEGDLDEVIDTLTKSAR 347


>gi|332558342|ref|ZP_08412664.1| peptide chain release factor 1 [Rhodobacter sphaeroides WS8N]
 gi|332276054|gb|EGJ21369.1| peptide chain release factor 1 [Rhodobacter sphaeroides WS8N]
          Length = 351

 Score =  210 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 116/342 (33%), Positives = 180/342 (52%), Gaps = 12/342 (3%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             V+R  FL  +           E   L RE   L   ++ I   +  L D      +  
Sbjct: 9   QIVRRFEFLEARLSAGAA---PAEIAALSREYAELKPVVAEISAYRTALEDLAEAEAMLS 65

Query: 78  EEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           + +  ++ ++    L+       +  +   L    AD+  A LE+  G GG E+  +A  
Sbjct: 66  DPEMRALAEDEIPALRARIPGMEQALRLALLPKDAADARPAILEIRPGTGGEEAALFAGD 125

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           LLRMY R+AE + ++ E L++   E  GI+ AT  I+G  A+  LK E GVHR+ R+   
Sbjct: 126 LLRMYQRYAEGQGWRFELLDLAPSELGGIREATARIEGEGAFARLKYESGVHRVQRVPET 185

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           ++  R HTS +++ V P   + +++EI  +D RIDT R+SGAGGQHVNTTDSAVRITH+P
Sbjct: 186 EAQGRIHTSAATVAVLP-EAEEVDLEIPAADIRIDTMRSSGAGGQHVNTTDSAVRITHLP 244

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG++V    E+SQH+N+  A  +LRA+LY+LE Q+  +        K ++G G    +IR
Sbjct: 245 TGIIVTSS-EKSQHRNREIAMQVLRARLYDLERQRLADAR--SADRKAQVGSGDRSERIR 301

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   + D R N+   +   ++ GDL + + A  A  +
Sbjct: 302 TYNF-PQGRMTDHRINLTLYALPQIMAGDLSEVISALTAHDQ 342


>gi|222109995|ref|YP_002552259.1| peptide chain release factor 1 [Acidovorax ebreus TPSY]
 gi|254790879|sp|B9ME05|RF1_DIAST RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|221729439|gb|ACM32259.1| peptide chain release factor 1 [Acidovorax ebreus TPSY]
          Length = 367

 Score =  210 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 112/352 (31%), Positives = 174/352 (49%), Gaps = 17/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QRL  L+       +  ++ + + + RE   +          Q R  D     E+
Sbjct: 9   LERYAQRLQELDFLLSREDIMADMQQYRSISREHAEVTQVAGRYARYQQREADLAGAREM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGTESQDW 133
             + D  + + +   +    +L     + + L       D  +A++E+ AG GG ES  +
Sbjct: 69  LEDPD-MAEMAQEEIHAAETELVQLEDELQRLLLPKDPDDERNAFIEIRAGTGGDESALF 127

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN--------AYGWLKGEQ 185
           A  L RMYTR+A    +K E +  ++ E  G K   L I+G           YG LK E 
Sbjct: 128 AGDLARMYTRYAATVGWKVEVMSANESEIGGYKEVVLRIEGQPGTGPSGSGVYGALKFES 187

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HR+ R+   ++  R HTS  ++ V P  D+   I ++ +D RIDT+RASGAGGQH+N 
Sbjct: 188 GGHRVQRVPATETQGRIHTSACTVAVMPEPDEHQAITLNPADLRIDTFRASGAGGQHINK 247

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+ H+PTG+V +CQ  RSQH NKA+A  +L+A++ E E  +R   A      K  
Sbjct: 248 TDSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSER--AAKEAALRKGL 305

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IG G    +IR+Y   P   + D R N+       +++GDL + ++A    +
Sbjct: 306 IGSGDRSDRIRTYNF-PQGRLTDHRINLTLYKLLAIMEGDLGEVLQALQHAR 356


>gi|295836498|ref|ZP_06823431.1| peptide chain release factor 1 [Streptomyces sp. SPB74]
 gi|197699008|gb|EDY45941.1| peptide chain release factor 1 [Streptomyces sp. SPB74]
          Length = 357

 Score =  210 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 114/349 (32%), Positives = 176/349 (50%), Gaps = 15/349 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +  +   + L     DP +  +   A+ L +    L   +   +  +    D   
Sbjct: 1   MFEAVEELIGEHAELERTLADPSVHADQANARRLSKRYAELTPIVGTYRAWRATGDDIAT 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             ELA E+ + +   +  D  +  +   E  +   +    +D  D  LE+ AGAGG ES 
Sbjct: 61  ARELAAEDPEFAAEIKQLDERR--EELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN---------AYGWLK 182
            +A  LLRMY R+AE+  +KTE L+  + E  G K   + +K             +  +K
Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEILDATESELGGYKDVQVAVKTKGNANPEPGQGVWARMK 178

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHR+ R+   +S  R HTS + + V P   + +++EI+ +D RID YR+SG GGQ 
Sbjct: 179 YEGGVHRVQRVPSTESQGRIHTSAAGVLVTP-EAEEVDVEINPNDLRIDVYRSSGPGGQS 237

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR++L     ++ E  A     S
Sbjct: 238 VNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREAADARRS 297

Query: 303 KTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +   +    +IR+Y   P   + D R   +  +   VLDG+LD  ++A 
Sbjct: 298 QVRTVDRSEKIRTYNF-PENRISDHRVGFKAYNLDQVLDGELDAVIQAC 345


>gi|157165147|ref|YP_001465968.1| peptide chain release factor 1 [Campylobacter concisus 13826]
 gi|166223539|sp|A7ZB10|RF1_CAMC1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|112801757|gb|EAT99101.1| peptide chain release factor 1 [Campylobacter concisus 13826]
          Length = 355

 Score =  210 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 110/340 (32%), Positives = 172/340 (50%), Gaps = 9/340 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
            R   ++T   DP++  ++ +   L +E+  ++   +   +    L D      L  + +
Sbjct: 11  DRYDEISTLLSDPNIANDIEKMTKLSKEQSSIEPVATAATKYLQILNDIEENKALLEDAE 70

Query: 81  DCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
                 +E        +   E  +   L     D  + +LE+ AG GG E+  +A  L  
Sbjct: 71  LGELAKEELKSLEISREKLEEEIKILLLPKDPNDDKNIFLEIRAGTGGDEAALFAGDLFN 130

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
            Y R+AE R +K E +   +G   G K   +LIKG  AY  LK E G HR+ R+   +S 
Sbjct: 131 AYIRYAELRGYKFEIVSQSEGNTGGFKEIIVLIKGKGAYSRLKFEGGTHRVQRVPETESQ 190

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ + P V+DS    I+ +D R+D  R+SG GGQ VNTTDSAVRITHIPTG+
Sbjct: 191 GRVHTSAVTVAIMPEVEDSEIE-INPNDIRVDVMRSSGHGGQSVNTTDSAVRITHIPTGL 249

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYV 316
           VV  Q  +SQHKNK  A  +L+A+LY  E+Q++E +A      K+++G G    +IR+Y 
Sbjct: 250 VVTNQDGKSQHKNKEAAMKVLKARLY--EMQEQERLAKETSERKSQVGTGDRSGRIRTYN 307

Query: 317 LQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
             P   + D R N+       ++  G  D+ ++  +   +
Sbjct: 308 Y-PQNRISDHRINLTLYRLDAIMAAGLFDEIIEPLITHYQ 346


>gi|304570793|ref|YP_002516272.2| peptide chain release factor 1 [Caulobacter crescentus NA1000]
 gi|22096040|sp|Q9A9V5|RF1_CAUCR RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 356

 Score =  210 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 114/345 (33%), Positives = 180/345 (52%), Gaps = 13/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   +  +        +  E   L +E   L      ++ +     +   L  +
Sbjct: 8   LDQVLDRFREVEARMGAAT---DGAEIVKLSKEHAELRPVAEAVERLAKLSAERAELDVM 64

Query: 76  ALEEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           A + +   ++++    L                   + ++  A LEV AG GG E+  +A
Sbjct: 65  ASDPEMAEMVRDEIQALDEKLPVMERELALMLAPKDKDENASAILEVRAGTGGDEAALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+A+ + ++ E   I +GE  G K     I G   +G LK E GVHR+ R+ 
Sbjct: 125 GDLFRMYQRYAQTQGWRVEIDSISEGEMGGFKEIVASITGDGVFGRLKFESGVHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P   + +EIEI ESD RIDTYR+SGAGGQHVN TDSAVRITH
Sbjct: 185 ATEAQGRIHTSAATVAVLP-EAEDVEIEIKESDLRIDTYRSSGAGGQHVNKTDSAVRITH 243

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTGVVV    E+SQH+N+A+A   L+A+LY+++ +  +  +   E+ K+++G G    +
Sbjct: 244 LPTGVVVTSS-EKSQHQNRARAMKNLKARLYDMQREALD--SARSEARKSQVGSGDRSER 300

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           IR+Y   P   V D R N+   + + +++GD LDD +   +A  +
Sbjct: 301 IRTYNF-PQGRVTDHRINLTLYNLARIMEGDALDDVINPLIAEDQ 344


>gi|322385289|ref|ZP_08058934.1| peptide chain release factor RF1 [Streptococcus cristatus ATCC
           51100]
 gi|321270548|gb|EFX53463.1| peptide chain release factor RF1 [Streptococcus cristatus ATCC
           51100]
          Length = 359

 Score =  210 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 161/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E       +    QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|23012458|ref|ZP_00052537.1| COG0216: Protein chain release factor A [Magnetospirillum
           magnetotacticum MS-1]
          Length = 361

 Score =  210 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 108/349 (30%), Positives = 173/349 (49%), Gaps = 15/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   +  +  D            L RE   LD  ++ I   +    +   +  L
Sbjct: 9   LDAILARHEIVTAQLADGS--AEAESIVQLSRELSELDGVVAAIHAYRAAEANLAGIRAL 66

Query: 76  ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E      ++  +   +       +      Q   L    AD   A LE+ AG GG E+
Sbjct: 67  IDEPGGDPEMRALAAEEKPDAEEALEQAHRALQLMLLPKDAADEKSAILEIRAGTGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY ++AE + ++ E +   +G   G +     +KG + +  LK E G HR+
Sbjct: 127 ALFAGDLFRMYAKYAESKGWRVEVISESEGTVGGYREVVAEVKGRSVFSRLKFESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + +++ I+E+D +IDT RA GAGGQHVN T+SA+
Sbjct: 187 QRVPDTETQGRIHTSAATVAVLP-EAEEVDVVINEADLKIDTMRAQGAGGQHVNKTESAI 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTGVVV  Q+ERSQHKN+A+A  +LRA+L++ E  +  + +      K ++G G 
Sbjct: 246 RITHLPTGVVVFVQEERSQHKNRARAMALLRARLFDAE--RSAKDSARAADRKAQVGSGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+      +V+ G  LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQGRVTDHRINLTLYKLEEVMAGPALDEVIDALVTEHQ 351


>gi|295425486|ref|ZP_06818179.1| peptide chain release factor RF1 [Lactobacillus amylolyticus DSM
           11664]
 gi|295064825|gb|EFG55740.1| peptide chain release factor RF1 [Lactobacillus amylolyticus DSM
           11664]
          Length = 362

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 96/347 (27%), Positives = 167/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +        L     DP +  +      + +E   L   +   K+ +    +     ++
Sbjct: 8   LEGLAAHYEELQEMMADPEVINDTKRYMEVSKEEADLREVVQKYKKYKAYQKEIADNKKI 67

Query: 76  ALEEDDCSILQETSDNL----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +E D  +++   +      + +    E  +   L     D  D  +E+   AGG E+ 
Sbjct: 68  ISDESDADLVEMAKEENSELEKELPELEEQIRILMLPKDPNDDKDIIMEIRGAAGGDEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY ++AE++ +K   ++    E  G K   ++I G   Y  LK E G HR+ 
Sbjct: 128 LFAGDLLRMYEKYAERQGWKVSMVDSEPTEVGGYKRVAIMITGDKVYSKLKYENGAHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + ++I++   D R+D YR+SGAGGQH+N T SAVR
Sbjct: 188 RIPVTESQGRVHTSTATVAVMP-EYEQVDIDLDPKDIRVDVYRSSGAGGQHINKTSSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV  Q +RSQ +N+ +A  +L++++Y+    +  +        K  +G G  
Sbjct: 247 MTHLPTGIVVAMQDQRSQQQNREKAMQILKSRVYDYYETQNRD--KYDAKRKNAVGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +       V++G+LD+ + A +   +
Sbjct: 305 SERIRTYNY-PQNRVTDHRIGLTINKLDRVMNGELDEIIDALILYNQ 350


>gi|297157199|gb|ADI06911.1| peptide chain release factor 1 [Streptomyces bingchenggensis BCW-1]
          Length = 356

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 114/347 (32%), Positives = 179/347 (51%), Gaps = 13/347 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +  +   + L  +  DP +  +  EA  L +    L   +   +  +    D   
Sbjct: 1   MFEAVEELIGEHADLEKRLADPAVHADQREATRLGKRYAELTPIVGTYRSWKQTGEDIET 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             ELA  + D +   +  +  +  +   +  +   +    +D  D  LEV AG GG ES 
Sbjct: 61  ARELAQLDADFADEVKELEARR--EELTDRLRLLLVPRDPSDDKDVILEVKAGEGGEESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGE 184
            +A  LLRMY R+AE+  +KTE ++ ++ +  G K   + +        G   +  LK E
Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEIIDANESDLGGYKDVQVAVKAKSNAEPGQGVWARLKYE 178

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS + + V P   + +E+EIS++D RID YR+SG GGQ VN
Sbjct: 179 GGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEVEVEISQNDLRIDVYRSSGPGGQSVN 237

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRITH+PTG+VV CQ E+SQ +NK QA  +LR++L     ++ E  A+    S+ 
Sbjct: 238 TTDSAVRITHLPTGIVVSCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREASDARRSQV 297

Query: 305 E-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +    +IR+Y   P   + D R   +  +   VLDG+LD  ++A 
Sbjct: 298 RTVDRSERIRTYNF-PENRISDHRVGFKAYNLDQVLDGELDPVIQAC 343


>gi|89890298|ref|ZP_01201808.1| peptide chain release factor 1 [Flavobacteria bacterium BBFL7]
 gi|89517213|gb|EAS19870.1| peptide chain release factor 1 [Flavobacteria bacterium BBFL7]
          Length = 358

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 91/342 (26%), Positives = 161/342 (47%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   +N     P +  +      L +E + L   +   +E      +     E+
Sbjct: 5   LNIVKNRFDEVNDLIIQPDIISDQKRYVQLTKEYKDLKALMEVREEYMTLTANLDEAKEI 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  +++         K  +   +       +     D+ +A +E+ AGAGG E+ 
Sbjct: 65  IADGSDADMVEMAQMQYDEAKEAIPELEEKIRMMLVPKDPEDAKNAVMEIRAGAGGDEAS 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++   + + T  ++   G   G K   L + G + YG LK E GVHR+ 
Sbjct: 125 IFAGDLFRMYEKYCSSKGWSTSVVDTSHGTSGGYKEIILEVNGEDVYGTLKFEAGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P  ++     +  ++ RI+   ++G GGQ VNTT SA++
Sbjct: 185 RVPQTETQGRVHTSAATVMVLPEAEEFDVE-LDMTEVRIERTTSTGPGGQSVNTTYSAIK 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           + H PTG++V CQ ++S HKN  +A  +LR++LYE+EL K+ E     E  K+ +  G +
Sbjct: 244 LHHEPTGMIVSCQDQKSSHKNLEKALKVLRSRLYEMELAKKME--ADSEKRKSMVSSGDR 301

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              IR+Y       V D R N+      ++++GD+   +   
Sbjct: 302 SAKIRTYNYS-QGRVTDHRINLTLYDLDNIINGDIQKIIDEL 342


>gi|317502848|ref|ZP_07960949.1| peptide chain release factor RF1 [Prevotella salivae DSM 15606]
 gi|315666037|gb|EFV05603.1| peptide chain release factor RF1 [Prevotella salivae DSM 15606]
          Length = 370

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 90/364 (24%), Positives = 161/364 (44%), Gaps = 20/364 (5%)

Query: 7   LNCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           +     + +  D    R   ++T   DP +  +      L +E + L + ++  K     
Sbjct: 1   MAENNSILEKLDGLESRFEEVSTLITDPDVIADQKRYVKLTKEWKDLGDIMNARKRYISC 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEV 121
           L        +   EDD  + +   + LQ  +      +       +     D+ +  +E+
Sbjct: 61  LDSIKEAKNILANEDDADMKEMAREELQENESLQPKLEEEIKLLLVPKDPEDAKNVQMEI 120

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG GG E+  +A  L  MY ++ + + +     ++ +G   G K     I G + YG +
Sbjct: 121 RAGTGGDEAALFAGDLFNMYKKYCDMKGWILSITDVSEGAVGGYKEIDFAISGTDVYGIM 180

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   +SN R  TS +++ V P  D      I+E D + DT+R+SGAGGQ
Sbjct: 181 KYESGVHRVQRVPVTESNGRMQTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQ 239

Query: 242 HVNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  +S VR+ +            ++++C + R Q KNK +A + L   +++ E QK  
Sbjct: 240 NVNKVESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTFIHDREHQKY- 298

Query: 294 EIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            + +I +  K+ +  G +   IR+Y   P   V D R           L+G++ D + A 
Sbjct: 299 -VDDIADRRKSLVSTGDRSAKIRTYNF-PQGRVTDHRIGYTTHDLQGFLNGNIQDMIDAL 356

Query: 351 LAIK 354
              +
Sbjct: 357 TVAE 360


>gi|222153023|ref|YP_002562200.1| peptide chain release factor 1 [Streptococcus uberis 0140J]
 gi|254790901|sp|B9DS45|RF1_STRU0 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|222113836|emb|CAR41933.1| peptide chain release factor 1 [Streptococcus uberis 0140J]
          Length = 359

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 97/348 (27%), Positives = 163/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +   R   L     DP +  +      L +E  +    ++  ++ +D +       E+
Sbjct: 7   LQSLEDRYEELGELLSDPEVVSDTKRFMELSKEEANTRETVATYRQYKDIIQSISDAEEM 66

Query: 76  ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E      ++E +    +      +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDPEIEEMAKEELKESKVAKEDYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY R+AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLDMYQRFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D RID Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEDVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQ 350


>gi|212550868|ref|YP_002309185.1| peptide chain release factor 2 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212549106|dbj|BAG83774.1| peptide chain release factor 2 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 328

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 119/326 (36%), Positives = 194/326 (59%), Gaps = 11/326 (3%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
            ++   AK  ++    + + +     +Q  + +  +  +     +     +E       +
Sbjct: 1   MKDPGYAKKQIKAIGIIKSWVDAYNVVQTAVEELQLAFDFNK--EGVVSEEEVDKVYSDV 58

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
            L +E  + +++L  E D   A ++++AGAGGTE+QDW  ML RMY+RW E + +K    
Sbjct: 59  VLLIEQLELKNMLHSEEDHLGAVIKINAGAGGTEAQDWVAMLYRMYSRWCEVKMYKVNIT 118

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
              +G++AGIK+ TL ++G +A+G+LK E GVHRLVR+SPY++  +R TSF+S+ V P++
Sbjct: 119 NWLEGDDAGIKTVTLQVEGDDAFGYLKSENGVHRLVRVSPYNAQGKRMTSFASVAVVPLI 178

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP--------TGVVVQCQQER 267
           DD+IEI+I+  D   DT+R+SGAGGQ+VN  ++ VR+ +          + +V++  + R
Sbjct: 179 DDTIEIDINLGDITWDTFRSSGAGGQNVNKVETGVRLHYNYKDPNSGETSEIVIENTESR 238

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQ  NK  A  +L++ LY+LEL++R +     E+ K +I WG QIRSYV    + VKD R
Sbjct: 239 SQFGNKDNAIRLLKSHLYKLELKRRRQAFAKIEAHKKKIEWGSQIRSYVFDD-RRVKDHR 297

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAI 353
           T  + ++   V+DGDLDD +KA L  
Sbjct: 298 TGWQTSNVQAVMDGDLDDLIKAYLMA 323


>gi|284053267|ref|ZP_06383477.1| peptide chain release factor 2 [Arthrospira platensis str. Paraca]
          Length = 309

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 138/296 (46%), Positives = 199/296 (67%), Gaps = 1/296 (0%)

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           ++ +  L D   + EL   EDD S+ QE   N+  +  +++  + + LLSG  D + A L
Sbjct: 5   QDWRKTLEDTGAIAELLELEDDESLRQEAESNVVHLGRDIDRWELQQLLSGPYDRSGAVL 64

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
            ++AGAGGT++QDWA MLLRMYTRW E + +K    E+ +G+EAGIKSATL ++GP AYG
Sbjct: 65  TINAGAGGTDAQDWAEMLLRMYTRWGEAQGYKVHLAELSEGDEAGIKSATLEMEGPYAYG 124

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGA 238
           +LK E+G HRLVRISP+++N +R TSF+ + + P+  + +I ++I E D  I T RA G 
Sbjct: 125 YLKAEKGTHRLVRISPFNANGKRQTSFAGVEIMPILDEGAINLDIPEKDLEITTSRAGGK 184

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ+VN  ++AVRI HIPTG+ V+C QERSQ +N+ +A  +L+AKL  +  ++R +    
Sbjct: 185 GGQNVNKVETAVRIVHIPTGIAVRCTQERSQLQNREKAMALLKAKLLVVAQEQRAQAIAE 244

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                 E  WG QIR+YV  PYQMVKDLRT  E T+ +DV++G+LD F++A L  +
Sbjct: 245 IRGDLVEAAWGNQIRNYVFHPYQMVKDLRTGEETTAINDVMNGELDGFIQAYLRQE 300


>gi|33241929|ref|NP_876870.1| peptide chain release factor 2 [Chlamydophila pneumoniae TW-183]
 gi|33236439|gb|AAP98527.1| translation releasing factor RF-2 [Chlamydophila pneumoniae TW-183]
          Length = 253

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 142/247 (57%), Positives = 182/247 (73%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           +LSGEAD N  +L ++AGAGGTES DW  ML RMY+RWA K ++  E ++  DGE  GIK
Sbjct: 1   MLSGEADKNSCFLTINAGAGGTESCDWVEMLFRMYSRWATKHQWALEVVDRLDGEVVGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
             T+   G  AYG+ K E+GVHRLVRISP+DSN +RHTSF+S+ V+P +DD I+IEI  +
Sbjct: 61  HVTVKFSGMYAYGYAKAERGVHRLVRISPFDSNGKRHTSFASVDVFPEIDDQIKIEIRPN 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDT+R+SGAGGQHVN T+SAVRITH+P+GVVV CQ ERSQ +N+     ML+AKLY+
Sbjct: 121 DLRIDTFRSSGAGGQHVNVTESAVRITHLPSGVVVSCQNERSQIQNRESCMKMLQAKLYQ 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDD 345
             LQ+R E  ++    K EI WG QIR+YV QPY +VKD+RT  E  +   +LDG+ LD+
Sbjct: 181 QVLQERLEKQSLDRKDKKEIAWGSQIRNYVFQPYTLVKDVRTGHETGNVQAMLDGELLDE 240

Query: 346 FMKATLA 352
           F+KA LA
Sbjct: 241 FIKAYLA 247


>gi|111225294|ref|YP_716088.1| peptide chain release factor 1 [Frankia alni ACN14a]
 gi|111152826|emb|CAJ64570.1| peptide chain release factor RF-1 [Frankia alni ACN14a]
          Length = 362

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 113/340 (33%), Positives = 175/340 (51%), Gaps = 15/340 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V   + +  +  DP +  +  +A+ L R    L   +   +E++         L  
Sbjct: 11  LDGLVAEHAEIEGQLADPAVHNDPAKARALSRRYAQLAPVVDLARELER----VEGDLAA 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTESQDW 133
           A E            +   ++L    ++  + L         DA LEV AGAGG ES  +
Sbjct: 67  ARELAAEDTSFRGEVDDLDVELAGLNERLRAYLVPVDPDDARDAILEVKAGAGGEESALF 126

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG------PNAYGWLKGEQGV 187
           A  LLRMY R+AE+R +KTE L+ +  +  G +  ++ +K          YG L+ E GV
Sbjct: 127 AGDLLRMYLRYAERRGWKTEILDANPSDLGGYRDVSVAVKARGSAAGDGVYGRLRFEGGV 186

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS + + V P   + +++EI  +D RID +R+SG GGQ VNTTD
Sbjct: 187 HRVQRVPVTESAGRIHTSAAGVLVLP-EAEEVDVEIDPNDLRIDVFRSSGPGGQSVNTTD 245

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-I 306
           SAVRITH+PTG+VV CQ E+SQ +NK  A  +LRA+L  +  +K E  A++  +S+   +
Sbjct: 246 SAVRITHVPTGLVVSCQNEKSQLQNKESALRILRARLLGVAREKAEAEASLARASQVRTV 305

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
               ++R+Y       + D R   +  +   VLDG+LD+ 
Sbjct: 306 DRSERVRTYNFA-ENRISDHRVGYKAHNLDQVLDGELDEV 344


>gi|111018484|ref|YP_701456.1| peptide chain release factor 1 [Rhodococcus jostii RHA1]
 gi|119361595|sp|Q0SGN8|RF1_RHOSR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|110818014|gb|ABG93298.1| peptide chain release factor RF1 [Rhodococcus jostii RHA1]
          Length = 359

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 113/346 (32%), Positives = 172/346 (49%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +   + L  +  DP L  +   A+   +    L   ++   +++    D     EL
Sbjct: 10  IDDILAEHAGLEQQLADPALHNDPSAARKAGKRFAELAPIMATYAKLKSAQDDLDAAREL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A ++   +      +       +              D +D  LEV +G GG ES  +A+
Sbjct: 70  AADDSSFAAEVPELEAQVLELDKALTDLL--APRDPHDGDDVVLEVKSGEGGEESALFAS 127

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190
            L RMY R+AE+  ++ E L+    +  G K ATL IK         +  LK E GVHR+
Sbjct: 128 DLARMYVRYAERHGWRVEILDATVSDLGGYKDATLSIKSKGDVRDGVWARLKFEGGVHRV 187

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + +YP  ++  E++I E+D RID YR+SG GGQ VNTTDSAV
Sbjct: 188 QRVPVTESQGRVHTSAAGVLIYPEPEEVEEVQIDETDLRIDVYRSSGKGGQGVNTTDSAV 247

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG+VV CQ ERSQ +NKA+A  +L A+L     +  +  A+ G  S+   +   
Sbjct: 248 RITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQAAAEEAADAEASAGRQSQVRTVDRS 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R   +  +   VLDG+LD  + A     +
Sbjct: 308 ERIRTYNF-PENRITDHRIGFKSHNLDAVLDGELDALLDALGKSDR 352


>gi|123969269|ref|YP_001010127.1| peptide chain release factor 1 [Prochlorococcus marinus str.
           AS9601]
 gi|229470358|sp|A2BTA9|RF1_PROMS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|123199379|gb|ABM71020.1| peptide chain release factor RF-1 [Prochlorococcus marinus str.
           AS9601]
          Length = 364

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 100/348 (28%), Positives = 168/348 (48%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
              A +    L  +  DP +  +  + + + RER  L+  +    ++ D   +      L
Sbjct: 10  LKTASESFENLEVQLADPDIANDPKKLESIARERSKLEPLVIDFNKLLDTDKEIEDSKNL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130
             E  +   ++   +       E++ +  +            D     LE+ AGAGG E+
Sbjct: 70  LKENRNDKEMESLINEELINLEEIKNELIQKTTIALLPKDPRDERSVMLEIRAGAGGNEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+ +K  +  + +   + +  G K   + +KG + Y  LK E GVHR+
Sbjct: 130 CIWAGDLARMYERYGQKIGWSVKPVSASESDMGGFKELVISVKGDSVYSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +E++I   D  + T R+ GAGGQ+VN  ++A+
Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADPVEVKIDPIDLEVGTARSGGAGGQNVNKVETAI 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C QERSQ +N+ +A  +LRAKLYE++L  +E  A       +++G G 
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQL--KEANAKERSQRLSQVGTGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R      S   +L G LD+ + A +A ++
Sbjct: 307 RSEKIRTYNFKD-NRTTDHRLG-SNFSLEPILAGQLDEVIDACIAQEQ 352


>gi|319939134|ref|ZP_08013498.1| peptide chain release factor 1 [Streptococcus anginosus 1_2_62CV]
 gi|319812184|gb|EFW08450.1| peptide chain release factor 1 [Streptococcus anginosus 1_2_62CV]
          Length = 359

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 160/348 (45%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  ++ +  L +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVATYRDYKRVLQNITDAEEM 66

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +       +    QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + +K E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 SLFAGDLLTMYQKYAESQGWKFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D RID Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEIVDALVLYDQ 350


>gi|322391878|ref|ZP_08065343.1| peptide chain release factor RF1 [Streptococcus peroris ATCC
           700780]
 gi|321145358|gb|EFX40754.1| peptide chain release factor RF1 [Streptococcus peroris ATCC
           700780]
          Length = 359

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 101/348 (29%), Positives = 164/348 (47%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQTVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E       +    QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKEAGGDADLEEMAKQELKDAKSEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           Q +A  LL+MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D RID Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350


>gi|15616790|ref|NP_240002.1| peptide chain release factor 1 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219681545|ref|YP_002467930.1| peptide chain release factor 1 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682101|ref|YP_002468485.1| peptide chain release factor 1 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471228|ref|ZP_05635227.1| peptide chain release factor 1 [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|11134308|sp|P57268|RF1_BUCAI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790868|sp|B8D8X1|RF1_BUCA5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790869|sp|B8D775|RF1_BUCAT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|25299668|pir||H84949 peptide chain release factor 1 [imported] - Buchnera sp.  (strain
           APS)
 gi|10038853|dbj|BAB12888.1| peptide chain release factor 1 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219621834|gb|ACL29990.1| peptide chain release factor 1 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624388|gb|ACL30543.1| peptide chain release factor 1 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311085914|gb|ADP65996.1| peptide chain release factor 1 [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311087068|gb|ADP67148.1| peptide chain release factor 1 [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 361

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 116/340 (34%), Positives = 173/340 (50%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +   R   +       ++  N    K L +E   L   I +  E +    D   +  L
Sbjct: 9   LKSLRNRYQEIEIMLTQKNVISNRENLKTLSKEYLKLSEIIKYFIEWEKLEVDIENVNIL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND-AYLEVHAGAGGTESQDWA 134
             + +   + +E      + K  +E K  + LL  + +     ++E+ +  GG ES  +A
Sbjct: 69  LNDVEIQGMAEEELYFFNKKKKALEKKINQLLLPEDPNDKHSCFIEIRSATGGDESSIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+AE   +K E +   + E+ G K     I G  A G LK E G HR+ R+ 
Sbjct: 129 GELFRMYLRYAESYSWKVEIMNTSESEKGGFKEIIAKITGRGACGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V PV   + + EI+ SD +IDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSTCTVAVMPVTPKTEKEEINSSDLKIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311
           IPTG VV+CQ ERSQHKNKA+A ++L A++Y  +L+K  + +      K  +G G    +
Sbjct: 249 IPTGNVVECQDERSQHKNKAKALSILSARVYAAKLEKDRQES--SSMRKILLGTGERSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            R+Y   P   + D R N+      +VL G LD  +   +
Sbjct: 307 NRTYNF-PQNRITDHRINLSIYKLDEVLQGKLDLLIDPII 345


>gi|85709577|ref|ZP_01040642.1| protein chain release factor A [Erythrobacter sp. NAP1]
 gi|85688287|gb|EAQ28291.1| protein chain release factor A [Erythrobacter sp. NAP1]
          Length = 355

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 112/346 (32%), Positives = 163/346 (47%), Gaps = 15/346 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLIL 72
            D    R + L  +     L     E     R+   L+        +K +++ +     +
Sbjct: 8   LDQIANRFAELEARMASGTL--EGEEFVAASRDYAELEPVAKIAGEVKAMREEIEGLEEM 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L     +                K               AD+  A LE+ AG GG E+  
Sbjct: 66  LADPEMKAMAEEELSAIREALPEKERSLAIALL--PRDRADAKPAMLEIRAGTGGDEAAL 123

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY ++A ++ ++ E + +   E  G K     + G   +  LK E GVHR+ R
Sbjct: 124 FAGDLFRMYEKYAAEQGWRVEPVSMSASEVGGFKEIVANVSGQGVFAKLKFESGVHRVQR 183

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P   D ++++I   D +IDTYRASGAGGQHVNTTDSA+RI
Sbjct: 184 VPVTESGGRIHTSAATVAVLP-EPDEVDVQIDPGDLKIDTYRASGAGGQHVNTTDSAIRI 242

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH PTG+VV CQ  RSQHKN+ +A  +LRA+LYE      E      E+ K  +G G   
Sbjct: 243 THEPTGLVVTCQDGRSQHKNREKAMQVLRARLYEKTRD--EAQGAEAEARKAMVGSGDRS 300

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIK 354
            +IR+Y   P   V D R  +      +VL G  LD+ + A +A  
Sbjct: 301 ERIRTYNF-PQGRVTDHRIGLTLHKLEEVLAGPGLDELVDALIAED 345


>gi|291298828|ref|YP_003510106.1| peptide chain release factor 1 [Stackebrandtia nassauensis DSM
           44728]
 gi|290568048|gb|ADD41013.1| peptide chain release factor 1 [Stackebrandtia nassauensis DSM
           44728]
          Length = 367

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 111/350 (31%), Positives = 169/350 (48%), Gaps = 16/350 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               +   S L  +  DP +  +   A+ + R    L    +   E+     D     EL
Sbjct: 10  LAVLLAEHSELEKQLADPSIHADAALARRVGRRYAELSPIAACNAELDTVKEDLAAAEEL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A ++ + +              E   +    L     DS D  +E+ AG GG ES  +A 
Sbjct: 70  AGDDPEFAAEATALRERIPQLEEKLAE--LLLPRDPDDSRDVIIEIKAGEGGAESALFAA 127

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVH 188
            LLRMY R+AEK  +  E ++  + E  G+K  ++ +K           +  +K E GVH
Sbjct: 128 DLLRMYLRYAEKHGWVAEIMDSQESEMGGVKDVSVAVKTKGNPEGGHGVWSRMKFEGGVH 187

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V P   + +++EI+  + RID YR+SG GGQ VNTTDS
Sbjct: 188 RVQRVPVTESQGRIHTSAAGVLVMP-EAEEVDVEINMHELRIDVYRSSGPGGQSVNTTDS 246

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI-- 306
           AVRITHIPTGVV  CQ E+SQ +NK  A  +LRA+L  L  ++ E  A  G + K+++  
Sbjct: 247 AVRITHIPTGVVASCQNEKSQLQNKEAAMRILRARL--LAAKQEEAEAAAGAARKSQVRT 304

Query: 307 -GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                ++R+Y   P   V D R      +   V+ GD+D  + A    ++
Sbjct: 305 VDRSERVRTYNF-PQNRVTDHRIGYTSHNLDQVMQGDMDGVLDALATAER 353


>gi|57505831|ref|ZP_00371756.1| peptide chain release factor 1 [Campylobacter upsaliensis RM3195]
 gi|57015861|gb|EAL52650.1| peptide chain release factor 1 [Campylobacter upsaliensis RM3195]
          Length = 355

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 112/340 (32%), Positives = 181/340 (53%), Gaps = 9/340 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +R   LNT   D  +  ++ +   L +E+++L+  +   K+  + L        L  + +
Sbjct: 11  KRYEELNTLLSDTKIINDIEKMTSLSKEQKNLEPIVLKTKDYFNTLTQIEDNKALLNDPE 70

Query: 81  DCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
                 +E  +  +      E  +   L     D  + +LE+ AG GG E+  +   L++
Sbjct: 71  FSELAKEELKNLEEEKINFEEEIKILLLPKDPNDEKNIFLEIRAGTGGDEASLFVGDLVK 130

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
            Y ++A+ R +K E +   +G   G K   +L+KG  AY  LK E G HR+ RI   +S 
Sbjct: 131 AYAKYADLRGYKIEIVSSSEGSAGGFKELIMLVKGTGAYSRLKFESGTHRVQRIPQTESQ 190

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ + P   D IEI+I+ +D +ID  R+SG GGQ VNTTDSAVRITHIP+G+
Sbjct: 191 GRIHTSAITVAIMP-EVDDIEIQINPNDLKIDVMRSSGHGGQSVNTTDSAVRITHIPSGL 249

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316
           VV  Q  +SQHKNK  A  +L+A+LY  E+Q+ E +A   E+ K+++G G    +IR+Y 
Sbjct: 250 VVVNQDGKSQHKNKESAMKILKARLY--EMQESERLAKESEARKSQVGSGDRSERIRTYN 307

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLAIKK 355
             P   + D R N+       +++G L D+ ++  +A  +
Sbjct: 308 F-PQNRISDHRINLTLYRLDAIMEGGLFDELIEPLIAHHQ 346


>gi|157414134|ref|YP_001485000.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9215]
 gi|238686831|sp|A8G733|RF1_PROM2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157388709|gb|ABV51414.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT
           9215]
          Length = 364

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 101/341 (29%), Positives = 169/341 (49%), Gaps = 13/341 (3%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
              L  +  DP +  +  + + + RER  L+  +    ++ D   +      L  E  + 
Sbjct: 17  FENLEVQLADPDIANDPKKLESIARERSKLEPLVIDFNKLLDTDKEIEDSKNLLKENRND 76

Query: 83  SILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTESQDWANML 137
             ++   +    I  E + +  +            D     LE+ AGAGG+E+  WA  L
Sbjct: 77  KEMESLINEELIILEEFKNELIQKTTIALLPKDPRDERSVMLEIRAGAGGSEACIWAGDL 136

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY R+ +K  +  +++   + +  G K   + +KG + Y  LK E GVHR+ R+   +
Sbjct: 137 ARMYERYGQKVGWSVKSVSASESDMGGFKELVISVKGDSVYSQLKFEAGVHRVQRVPATE 196

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  R HTS +++ V P   D +E++I  +D  I T R+ GAGGQ+VN  ++A+ + H PT
Sbjct: 197 SQGRVHTSTATVAVMP-EADPVEVKIDPTDLEIGTARSGGAGGQNVNKVETAIDLLHKPT 255

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314
           G+ V C QERSQ +N+ +A  +LRAKLYE++L+  E  A       +++G G    +IR+
Sbjct: 256 GIRVFCTQERSQLQNRERAMEILRAKLYEIQLK--EANAKERSQRLSQVGTGDRSEKIRT 313

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           Y  +      D R      S   +L G LD+ + A +A ++
Sbjct: 314 YNFKD-NRTTDHRLG-SNFSLEPILAGQLDEVINACIAQEQ 352


>gi|307704777|ref|ZP_07641673.1| peptide chain release factor 1 [Streptococcus mitis SK597]
 gi|307621686|gb|EFO00727.1| peptide chain release factor 1 [Streptococcus mitis SK597]
          Length = 359

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 161/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEESSSRDTVTAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E       +    QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|296138963|ref|YP_003646206.1| peptide chain release factor 1 [Tsukamurella paurometabola DSM
           20162]
 gi|296027097|gb|ADG77867.1| peptide chain release factor 1 [Tsukamurella paurometabola DSM
           20162]
          Length = 362

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 118/350 (33%), Positives = 174/350 (49%), Gaps = 13/350 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +   S L  +  DP L  +   A+ + +    L   ++  ++++    D     EL
Sbjct: 9   IDDILAEYSGLEQQMSDPALHNDASAARKVGKRFAELAPIMATHRKLEAAREDRAAAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A ++   +              +              DS+D  LEV +G GG ES  +A 
Sbjct: 69  AADDSSFADEVTVLTEQIDALEQQLTDLL--APRDPHDSDDVVLEVKSGEGGEESALFAG 126

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG---------PNAYGWLKGEQG 186
            L RMY R+AE+R +K E L     +  G K AT  IK             +  +K E G
Sbjct: 127 DLARMYLRYAEQRGWKVETLGATYSDLGGYKDATFAIKSRGPGADGAIDGVWARMKFEGG 186

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS + + VYP  D+  E++I ESD RID YR+SG GGQ VNTT
Sbjct: 187 VHRVQRVPATESQGRIHTSAAGVLVYPEPDEVEEVQIDESDLRIDVYRSSGKGGQGVNTT 246

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE- 305
           DSAVRITH+PT +VV CQ ERSQ +NKA+A  +L A+L  L  ++ E  A+   +++   
Sbjct: 247 DSAVRITHLPTNIVVTCQNERSQLQNKARAMQVLAARLQALREEEAEAAASDSRAAQIRT 306

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +    +IR+Y   P   + D R   +  +   VLDG+LD  + A  A  +
Sbjct: 307 VDRSERIRTYNF-PENRIADHRIGFKAHNLDQVLDGELDPLLDALQAADR 355


>gi|148984974|ref|ZP_01818217.1| peptide chain release factor 1 [Streptococcus pneumoniae SP3-BS71]
 gi|147922672|gb|EDK73789.1| peptide chain release factor 1 [Streptococcus pneumoniae SP3-BS71]
          Length = 354

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 160/348 (45%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + +   +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNIVDAEEM 66

Query: 76  ALEEDDCSI-----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E    +       QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEELAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|254411738|ref|ZP_05025514.1| peptide chain release factor 2 [Microcoleus chthonoplastes PCC
           7420]
 gi|196181460|gb|EDX76448.1| peptide chain release factor 2 [Microcoleus chthonoplastes PCC
           7420]
          Length = 305

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 142/299 (47%), Positives = 203/299 (67%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +   ++ +  L D   +LEL   E D  +LQE   N+ ++  E++  + E LLSG  D+N
Sbjct: 3   LQQYQQWKSNLEDAKAVLELLELETDEGLLQEAQTNVVKLNRELDRWELEQLLSGPYDAN 62

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
            A L ++AGAGGT++QDWA MLLRMYTRWAE + +K +  E  +G+EAGIKSATL I+G 
Sbjct: 63  GAVLAINAGAGGTDAQDWAEMLLRMYTRWAENQGYKVQLAEFSEGDEAGIKSATLEIQGL 122

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYG+LK E+G HRLVRISPY++N +R TSF+ + V P++++ ++++I E+D  I T R+
Sbjct: 123 RAYGYLKAEKGTHRLVRISPYNANGKRQTSFAGVEVMPILNEDVDLDIPETDLEITTSRS 182

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
            G GGQ+VN  ++AVR+ HIPT + V+C QERSQ +NK +A  +L+AKL  +  ++R + 
Sbjct: 183 GGKGGQNVNKVETAVRVKHIPTDIAVRCTQERSQLQNKEKALALLKAKLLVIAQEQRAQE 242

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                    E  WG QIR+YV  PYQ+VKDLRTN+E T   DVL+G LD F++A L  +
Sbjct: 243 IAEIRGDMVEAAWGNQIRNYVFHPYQLVKDLRTNVETTGVDDVLNGTLDPFIEAYLRQE 301


>gi|304321558|ref|YP_003855201.1| peptide chain release factor 1 [Parvularcula bermudensis HTCC2503]
 gi|303300460|gb|ADM10059.1| peptide chain release factor 1 [Parvularcula bermudensis HTCC2503]
          Length = 360

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 120/347 (34%), Positives = 169/347 (48%), Gaps = 14/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72
            +    R + +  K           E   L +E   L         + + +  L D   L
Sbjct: 7   LNALKTRFAEVEAKMAKAT---EADEIVRLSKEHAELKPVAEAALLLTDARQGLLDAEGL 63

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +    E      +E +    +I+      Q   L   +AD     LEV AG GG E+  
Sbjct: 64  TKSTDPEMAEMAKEEIASLTGQIERLEADLQLMLLPKDKADQAPVILEVRAGTGGDEAAL 123

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY R+A  R ++ E L   +    G K     + G N +G LK E GVHR+ R
Sbjct: 124 FAGDLFRMYQRYAATRGWRVEILSATESGVGGYKEIQANVSGDNVFGRLKFESGVHRVQR 183

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P   + I+I+I ESD RID +RASG GGQ VNTTDSAVRI
Sbjct: 184 VPETETQGRIHTSAATVAVLP-EPEDIDIDIQESDLRIDVFRASGPGGQSVNTTDSAVRI 242

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTGVVV  Q E+SQHKN+A+A  +LRA+LYE E  +           K ++G G   
Sbjct: 243 THIPTGVVVSQQDEKSQHKNRAKAMKVLRARLYEAERSRVAAER--AAERKGQVGSGDRS 300

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
            +IR+Y   P   V D R N+       V+ G+ +DD + A +   +
Sbjct: 301 ERIRTYNF-PQGRVTDHRINLTLYKLDKVIAGEAVDDLIDALIVEDQ 346


>gi|269114934|ref|YP_003302697.1| Peptide chain release factor 1 [Mycoplasma hominis]
 gi|268322559|emb|CAX37294.1| Peptide chain release factor 1 [Mycoplasma hominis ATCC 23114]
          Length = 359

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 109/342 (31%), Positives = 176/342 (51%), Gaps = 6/342 (1%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC----DNLILL 73
           +   +   L  K  DP+++ ++     + +E+  L       K+ Q+          IL 
Sbjct: 11  SIKNQYDELTEKLNDPNIYNDIKAYTRIAKEKSELQEIYDAFKKYQNIEELYFLSKEILT 70

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
               +E       +  + + +++   E  +   L   E D  D  +E+   AGG E+  +
Sbjct: 71  NEKDQELIELAKNDIDNQMNQLQEIEEEIKELLLPQDENDKRDVIMEIRGAAGGDEANIF 130

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           +  L +MY ++AE + FK + ++   G   G       IKG   +  LK E+GVHR+ R+
Sbjct: 131 SGDLFKMYQKYAEIKGFKIKIIDSTYGAAGGYSQIVFSIKGEKVFSQLKFERGVHRVQRV 190

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ V P VD+ ++IEI   D  ++ +R+SGAGGQ VNTTDSAVRIT
Sbjct: 191 PATETQGRVHTSTATVTVLPEVDEDVKIEIRPEDIEVNVFRSSGAGGQSVNTTDSAVRIT 250

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H PTG+VV  Q ERSQ +NK  A  +L+++LYELEL+KREE  +             +IR
Sbjct: 251 HKPTGLVVTSQDERSQIQNKETALKVLKSRLYELELRKREEAESGLRKLAGTGDRSEKIR 310

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   + D R     +    V++G+LD  ++A +A +K
Sbjct: 311 TYNY-PQDRITDHRIGFSTS-LKVVMEGELDKIIEALIADEK 350


>gi|262282281|ref|ZP_06060049.1| peptide chain release factor 1 [Streptococcus sp. 2_1_36FAA]
 gi|262261572|gb|EEY80270.1| peptide chain release factor 1 [Streptococcus sp. 2_1_36FAA]
          Length = 359

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 100/348 (28%), Positives = 164/348 (47%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E       +    QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           Q +A  LL+MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350


>gi|228472858|ref|ZP_04057615.1| peptide chain release factor 1 [Capnocytophaga gingivalis ATCC
           33624]
 gi|228275440|gb|EEK14217.1| peptide chain release factor 1 [Capnocytophaga gingivalis ATCC
           33624]
          Length = 357

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 96/346 (27%), Positives = 169/346 (48%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   QR   ++     P++  +      L +E + L   +   +E      +     E+
Sbjct: 5   LDIVKQRFDEVSDLIIQPNIIADQKRYVQLTKEYKELKQLMDKRQEYITVTRNITEAEEI 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E  D  + +     L+  K  +   +    F  +     DS +A +E+ AG GG E+ 
Sbjct: 65  IKENIDPEMTEMARLQLEEAKERLPQLEEEIKFLLIPKDPEDSKNAVMEIRAGTGGDEAS 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++ + + +    +++++G   G K   L + G + YG LK E GVHR+ 
Sbjct: 125 IFAGDLYRMYSKYCQDKGWSVSVMDMNEGTSGGFKEIILEVNGEDVYGTLKFEAGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P  ++     ++  D +I    ++G GGQ VNTT SA++
Sbjct: 185 RVPQTETQGRVHTSAATVMVLPEAEEFDVE-LNMEDVKIIRTTSTGPGGQSVNTTYSAIQ 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           + HIPTG+ V+CQ E+SQHKN  +A  +LR++LYE+EL K+ E        K+ +  G +
Sbjct: 244 LQHIPTGIEVRCQDEKSQHKNLDKALKVLRSRLYEMELAKKME--ADSARRKSMVSSGDR 301

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              IR+Y   P   V D R  +      ++++GD+   +      +
Sbjct: 302 SAKIRTYNY-PQGRVTDHRIGLTLYDLGNIMNGDIQRLIDELQLAE 346


>gi|149195429|ref|ZP_01872512.1| peptide chain release factor 1 [Caminibacter mediatlanticus TB-2]
 gi|149134434|gb|EDM22927.1| peptide chain release factor 1 [Caminibacter mediatlanticus TB-2]
          Length = 355

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 106/348 (30%), Positives = 180/348 (51%), Gaps = 12/348 (3%)

Query: 16  WDNAV---QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
            +      ++ + +N K   P + +++ +   L RE + L+  ++  KE ++ L +    
Sbjct: 3   LEKLKPFVEKYNEINQKLSSPEITKDIKQMTKLSREARSLEEIVNKAKEYEELLNNLEEA 62

Query: 73  LELALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  + +      +E  +  +++    E  +   L     D  + +LE+ AG GG E+ 
Sbjct: 63  KMMLDDAEMSELAKEEIKEIEEKLPKLEEEIKLLLLPKDPNDDKNIFLEIRAGTGGDEAA 122

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L++ Y R+A+ + +K E +     +  G K   LLIKG  AY  LK E G HR+ 
Sbjct: 123 LFVGDLMKAYLRYADNKGWKVEIVSESKNDIGGYKEIILLIKGEGAYSRLKYEGGTHRVQ 182

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS  ++ V P   D ++IE+   D +I+  RA GAGGQHVN T+SAVR
Sbjct: 183 RIPATESQGRIHTSAVTVAVMP-EVDDVDIELDPKDIKIEVMRAGGAGGQHVNKTESAVR 241

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+ V  Q ERSQ +NK +A  +L+A++YE   ++R E   IG+  K+++G G  
Sbjct: 242 MTHIPTGITVSMQDERSQQRNKEKALQILKARVYEKLEKERLE--KIGKERKSQVGSGDR 299

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD-GDLDDFMKATLAIKK 355
             +IR+Y   P   + D R  +       +++ G  D+ +   +A  +
Sbjct: 300 SERIRTYNY-PQNRITDHRIGLTLYRLEQIMNEGLFDEIIDPLIAHYQ 346


>gi|157825493|ref|YP_001493213.1| peptide chain release factor 2 [Rickettsia akari str. Hartford]
 gi|157799451|gb|ABV74705.1| peptide chain release factor 2 [Rickettsia akari str. Hartford]
          Length = 285

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 159/253 (62%), Positives = 197/253 (77%)

Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
             + E L SGEAD N+ +LE++AGAGGTES DWA++++RMY R+AE+  FKTE + + +G
Sbjct: 27  KFETECLFSGEADGNNCFLEINAGAGGTESHDWASIMMRMYLRFAERLGFKTEIINMLNG 86

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220
           EE GIKS T+ I G  AYGW K E GVHRLVRISP+++  +R TSF+S WVYP +DD+I 
Sbjct: 87  EEVGIKSCTIRIIGKRAYGWFKTEAGVHRLVRISPFNAAGKRMTSFASSWVYPAIDDNIA 146

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           I I + D RIDT+RASGAGGQHVNTTDSAVRITHIPTG V QCQ +RSQHKNKAQA  ML
Sbjct: 147 ITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITHIPTGTVTQCQSDRSQHKNKAQAMKML 206

Query: 281 RAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           +AKLYELE+QKR +  N   ++KT+  WG QIRSY+L PYQMVKDLRT+ E +    VLD
Sbjct: 207 QAKLYELEMQKRTDSVNEQNAAKTDSSWGYQIRSYILHPYQMVKDLRTDYETSDTKGVLD 266

Query: 341 GDLDDFMKATLAI 353
           GDL++F+ A LA+
Sbjct: 267 GDLEEFVSANLAM 279


>gi|254451602|ref|ZP_05065039.1| peptide chain release factor 1 [Octadecabacter antarcticus 238]
 gi|198266008|gb|EDY90278.1| peptide chain release factor 1 [Octadecabacter antarcticus 238]
          Length = 344

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 111/338 (32%), Positives = 168/338 (49%), Gaps = 12/338 (3%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              +R  FL  +  +            + RE   L   +  ++  QD   +      +  
Sbjct: 2   QITERFEFLEAQMGEG---LGGEAFVAVSREYAELRPVVEVVRTYQDLTAEIEGAEAMLS 58

Query: 78  EEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           + +   + +     L++         +   +    AD   A LE+  G GG E+  +A  
Sbjct: 59  DPEMKELAEMELPQLRQQLPAAEAAVKLALIPKDAADGKPALLEIRPGTGGDEAALFAAD 118

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           LLRMY R+AE R +  E LE    E  GIK  T  I G N +  +K E GVHR+ R+   
Sbjct: 119 LLRMYQRYAENRGWTFEILEESQSELGGIKEVTARIAGNNVFARMKYESGVHRVQRVPET 178

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS +++ V P   + ++I+I+ +D RIDT RASG+GGQHVNTTDSAVRITH+P
Sbjct: 179 ESGGRIHTSAATVAVLP-EAEDVDIQINANDIRIDTMRASGSGGQHVNTTDSAVRITHMP 237

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           +G+VV    E+SQH+N+  A  +L+ +LY+ E QK  +          ++G G    +IR
Sbjct: 238 SGIVVTSS-EKSQHRNREIAMQVLKTRLYDAERQKVHDER--SADRAAQVGSGDRSERIR 294

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +Y   P   + D R N+       VL GDLD+ +   +
Sbjct: 295 TYNF-PQGRMTDHRINLTLYKLDAVLQGDLDEVIDGLI 331


>gi|325689728|gb|EGD31732.1| peptide chain release factor RF1 [Streptococcus sanguinis SK115]
          Length = 359

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 163/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L +     ++
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKKVLQNITDAEDM 66

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +       +    QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           Q +A  LL+MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350


>gi|150025963|ref|YP_001296789.1| peptide chain release factor 1 [Flavobacterium psychrophilum
           JIP02/86]
 gi|166223557|sp|A6H0W3|RF1_FLAPJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|149772504|emb|CAL43987.1| Peptide chain release factor 1 (RF-1) [Flavobacterium psychrophilum
           JIP02/86]
          Length = 357

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 100/346 (28%), Positives = 175/346 (50%), Gaps = 12/346 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D      Q+   ++     P +  +      L +E + L + +    E    + +   
Sbjct: 1   MLDRLQIIKQKFDEISDLIIQPDVIADQKRYVALNQEYKGLKSLVEKRDEYVILMANIEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             E+  +  D  +++     L+  K  +   +    F  +     D+ +  +E+ AG GG
Sbjct: 61  ANEIIADGSDADMVEMAKMQLEEAKERLPELEEEIKFLLIPKDAEDAKNVMVEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYT++ E R ++T  +++++G   G K     + G + YG LK E GV
Sbjct: 121 DEASIFAGDLFRMYTKYCENRGWRTSVVDMNEGTSGGFKEVIFEVTGEDVYGTLKFEAGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P  ++     I  +D R+D + +SG GGQ VNTT 
Sbjct: 181 HRVQRVPQTETQGRVHTSAATVMVLPEAEEFDVQ-IDMNDVRVDFFCSSGPGGQSVNTTK 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V QCQ ++SQHKNK +A+ +LR++LYE EL K++    +  +  +++ 
Sbjct: 240 SAVRLTHIPTGLVAQCQDQKSQHKNKDKAFGVLRSRLYEQELAKKQADDAVKRT--SQVS 297

Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            G +   IR+Y       V D R  ++      V++G +  F+   
Sbjct: 298 SGDRSAKIRTYNYS-QGRVTDHRIGLDVFDMDGVMNGKIQKFVDEL 342


>gi|332360425|gb|EGJ38236.1| peptide chain release factor RF1 [Streptococcus sanguinis SK355]
          Length = 359

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 163/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVAAYREYKKVLQNITDAEEM 66

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +       +    QE  +     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDADLEEMAKQELKNAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           Q +A  LL+MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350


>gi|91217382|ref|ZP_01254342.1| peptide chain release factor 1 [Psychroflexus torquis ATCC 700755]
 gi|91184490|gb|EAS70873.1| peptide chain release factor 1 [Psychroflexus torquis ATCC 700755]
          Length = 358

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 98/346 (28%), Positives = 175/346 (50%), Gaps = 12/346 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  +   QR   ++     P +  N      L +E + L   +   +   +   +   
Sbjct: 1   MLDKLNFIKQRFDEVSDLIIQPDIMSNQKRYIELSKEYKDLKAIMDEREIYIELTDNLKE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             ++   E D  +++         K+E+   +       +     D+ +A +EV AGAGG
Sbjct: 61  ANDIISNESDAEMVEMAKLQYDEAKVELPNLEEKIRMMLIPKDPEDAKNAVVEVRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  + RM +++ E + +K + ++ ++G   G K     + G + YG LK E GV
Sbjct: 121 DEASIFAGDIFRMLSKYCEHKGWKVDVVDYNEGTNGGYKEIQFEVSGDDVYGTLKYEAGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V+P  ++     ++  + R+D + +SG GGQ VNTT 
Sbjct: 181 HRVQRVPQTETQGRVHTSAATVMVFPEAEEFDIE-VNPKEVRVDYFCSSGPGGQSVNTTY 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH PTG+V QCQ ++SQHKNK +A+ +LR++LYE+EL K++      E   + + 
Sbjct: 240 SAVRLTHEPTGIVAQCQDQKSQHKNKEKAFRVLRSRLYEMELAKKQAE--DAEKRGSMVT 297

Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            G +   IR+Y       V D R N+      ++++GDL+  +   
Sbjct: 298 SGDRSAKIRTYNYS-QSRVTDHRINLTLYDLDNIINGDLEKIINEL 342


>gi|288925782|ref|ZP_06419713.1| peptide chain release factor 1 [Prevotella buccae D17]
 gi|315608268|ref|ZP_07883258.1| peptide chain release factor RF1 [Prevotella buccae ATCC 33574]
 gi|288337437|gb|EFC75792.1| peptide chain release factor 1 [Prevotella buccae D17]
 gi|315250049|gb|EFU30048.1| peptide chain release factor RF1 [Prevotella buccae ATCC 33574]
          Length = 370

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 90/354 (25%), Positives = 154/354 (43%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   ++T   DP +  +      L +E + L + +   K     L       ++
Sbjct: 11  LDGLESRFEEVSTLITDPDVIADQQRYVKLTKEYKDLGDIMDVRKRYIACLNAIKESKDI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L   +      + E           D+ +  +E+ AGAGG E+ 
Sbjct: 71  LANESDADMKEMAREELATNEDLQPKLEEEIKIALVPKDPEDAKNVQMEIRAGAGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY ++ + + +      + +G   G K     + G + YG LK E GVHR+ 
Sbjct: 131 LFAGDLFNMYKKYCDSKGWNLSVTSVSEGAVGGYKEIDFAVSGVDVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P  D      I+E D + DT+R+SGAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRMHTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKVESGVR 249

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +            ++++C + R Q KNK +A + L   +++ E QK   I +I    K
Sbjct: 250 LRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTFIHDREHQKY--IDDIASRRK 307

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + +  G +   IR+Y   P   V D R           + GD+ D + A    +
Sbjct: 308 SLVSTGDRSAKIRTYNF-PQGRVTDHRIGYTTHDLQGFMGGDIQDMIDALTVAE 360


>gi|332716892|ref|YP_004444358.1| peptide chain release factor 1 [Agrobacterium sp. H13-3]
 gi|325063577|gb|ADY67267.1| peptide chain release factor 1 [Agrobacterium sp. H13-3]
          Length = 360

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 178/344 (51%), Gaps = 18/344 (5%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   +  +    P           L  E   L+  +  ++E +  + +   L  L 
Sbjct: 11  ELERRFGEIEARMSAGPA----ADVYVKLASEYSELEPVVKKVREYEKAVSEAADLQALL 66

Query: 77  LEEDDCSILQE-TSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
            ++     +++     L  ++  +   + E          AD   A LE+ AG GG+E+ 
Sbjct: 67  ADKTTDKDMRDLAEMELPEVEARIGELEKEMQVLLLPKDAADEKSAILEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A  + +K E L   +GE  G K     I G   +  LK E GVHR+ 
Sbjct: 127 LFAGDLFRMYERFASAKGWKVEVLSASEGEAGGYKEIIATISGRGVFSKLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS +++ V P   + I++EI   D RIDT RASGAGGQHVNTTDSAVR
Sbjct: 187 RVPETEASGRIHTSAATVAVLP-EAEDIDVEIRPEDIRIDTMRASGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG++V    E+SQH+N+A+A  +LR++LY++E QK E         K+++G G  
Sbjct: 246 ITHLPTGLIVTSS-EKSQHQNRAKAMQVLRSRLYDIERQKVESER--SADRKSQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       +++G++D+ + A +A
Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLYKLDRMIEGEIDELVDALIA 345


>gi|322411678|gb|EFY02586.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 359

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 94/348 (27%), Positives = 162/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  +       E+
Sbjct: 7   LQAVEDRYEELGELLSDPEVVSDTKRFMALSKEEASTRDTVTTYREYKQVIQAIADAEEM 66

Query: 76  ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             + +    L+E +    +      +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKDANGDPELEEMAKEELKESKAAKEDYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ + P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLIMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEIIDALVMYDQ 350


>gi|332360650|gb|EGJ38459.1| peptide chain release factor RF1 [Streptococcus sanguinis SK49]
          Length = 359

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 99/348 (28%), Positives = 163/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKKVLQNITDAEEM 66

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +       +    QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDADLEEMAKQELKDAKSEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           Q +A  LL+MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350


>gi|163867491|ref|YP_001608690.1| peptide chain release factor 1 [Bartonella tribocorum CIP 105476]
 gi|189039959|sp|A9IMM3|RF1_BART1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|161017137|emb|CAK00695.1| peptide chain release factor 1 [Bartonella tribocorum CIP 105476]
          Length = 358

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 117/349 (33%), Positives = 182/349 (52%), Gaps = 18/349 (5%)

Query: 16  WDNAVQRLSFLNTKTE-DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
                +R   + ++   +P    N      L  E   L   I+ I+ +     +   L  
Sbjct: 9   IKQLEKRFEIIESQMTTNP----NAETYVKLASEYAELQPVIASIRALNALYGEITELET 64

Query: 75  LALEEDDCSILQETSDN-----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           +  ++     ++  +        ++++   +  Q   L    AD   A +E+ AG GG+E
Sbjct: 65  IINDKQTDIEMRHLAQEELPSLHKKVEQLEKELQILLLPKDVADEKSAIVEIRAGTGGSE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  ++  L RMY R+A    +K E + + +GE  G K     I G   +  LK E GVHR
Sbjct: 125 AALFSGDLFRMYERYAHAHHWKVEVISLSEGEVGGYKEIIATISGKGVFSKLKYESGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + RI   ++  R HTS +++ V P   + I+I+I   D RIDT RASGAGGQHVNTTDSA
Sbjct: 185 VQRIPETETGGRIHTSAATVAVLP-EAEEIDIDIRPEDIRIDTMRASGAGGQHVNTTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG++V  Q E+SQH+N+A+A  +LRA+L+++E QK E       S K+++G G
Sbjct: 244 VRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQKVESER--SASRKSQVGSG 300

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       +L+GDLD+ + A ++  +
Sbjct: 301 DRSERIRTYNF-PQGRVTDHRINLTLYKLDRILEGDLDEIIHALISDHQ 348


>gi|167855181|ref|ZP_02477952.1| peptide chain release factor 2 [Haemophilus parasuis 29755]
 gi|219871045|ref|YP_002475420.1| peptide chain release factor 2 [Haemophilus parasuis SH0165]
 gi|167853726|gb|EDS24969.1| peptide chain release factor 2 [Haemophilus parasuis 29755]
 gi|219691249|gb|ACL32472.1| peptide chain release factor 2 [Haemophilus parasuis SH0165]
          Length = 248

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 146/247 (59%), Positives = 189/247 (76%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D+ D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+K
Sbjct: 1   MFSGQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP VDD  +IEI+ +
Sbjct: 61  SATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEVDDDFDIEINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITH+P+G+VVQCQ  RSQH+NK QA   L+AKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNGRSQHQNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +E+ K+       E SK++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F
Sbjct: 181 MEMMKKNAEKQAMEESKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKF 239

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 240 IEASLKA 246


>gi|121593273|ref|YP_985169.1| peptide chain release factor 1 [Acidovorax sp. JS42]
 gi|166223524|sp|A1W4B8|RF1_ACISJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|120605353|gb|ABM41093.1| bacterial peptide chain release factor 1 (bRF-1) [Acidovorax sp.
           JS42]
          Length = 367

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 112/352 (31%), Positives = 175/352 (49%), Gaps = 17/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QRL  L+       +  ++ + + + RE   +          Q R  D     E+
Sbjct: 9   LERYAQRLQELDFLLSREDIMADMQQYRSISREHAEVTQVAGRYARYQQREADLAGAREM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGTESQDW 133
             + D  + + +   +    +L     + + L       D  +A++E+ AG GG ES  +
Sbjct: 69  LEDPD-MAEMAQEEIHAAETELVQLEDELQRLLLPKDPDDERNAFIEIRAGTGGDESALF 127

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN--------AYGWLKGEQ 185
           A  L RMYTR+A    +K E +  ++ E  G K   L I+G +         YG LK E 
Sbjct: 128 AGDLARMYTRYAATVGWKVEVMSANESEIGGYKEVVLRIEGQSGTGPSGSGVYGALKFES 187

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HR+ R+   ++  R HTS  ++ V P  D+   I ++ +D RIDT+RASGAGGQH+N 
Sbjct: 188 GGHRVQRVPATETQGRIHTSACTVAVMPEPDEHQAITLNPADLRIDTFRASGAGGQHINK 247

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+ H+PTG+V +CQ  RSQH NKA+A  +L+A++ E E  +R   A      K  
Sbjct: 248 TDSAVRVVHLPTGIVAECQDGRSQHSNKAKALQVLQARIQEKERSER--AAKEAALRKGL 305

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IG G    +IR+Y   P   + D R N+       +++GDL + ++A    +
Sbjct: 306 IGSGDRSDRIRTYNF-PQGRLTDHRINLTLYKLLAIMEGDLGEVLQALQHAR 356


>gi|332366923|gb|EGJ44664.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1059]
          Length = 359

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 99/348 (28%), Positives = 163/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEESSTRDTVTAYREYKKVLQNITDAEEM 66

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +       +    QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           Q +A  LL+MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350


>gi|126739408|ref|ZP_01755101.1| peptide chain release factor 1 [Roseobacter sp. SK209-2-6]
 gi|126719508|gb|EBA16217.1| peptide chain release factor 1 [Roseobacter sp. SK209-2-6]
          Length = 351

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 118/344 (34%), Positives = 174/344 (50%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +QR  +L     +     +  E   L RE   +      I   +  L D      +
Sbjct: 7   LEQILQRFQYLEAAMAEG---ASGAEIADLAREYSEIKPVAEQICAYRQLLADLEEAEVM 63

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E    L+          Q   L    AD+  A LE+  G GG E+  +A
Sbjct: 64  LADPDMKELAEEEIPTLKAALPDAEHALQLALLPKDAADTRPAMLEIRPGTGGDEASLFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE R +K E +E    E  GIK   + IKG N +  +K E GVHR+ R+ 
Sbjct: 124 GDLLRMYQRYAEARGWKFEVIEEQATELGGIKEVVVHIKGENVFARMKYESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++I I  +D RIDT R+SGAGGQHVNTTDSAVRITH
Sbjct: 184 VTESGGRIHTSAATVAVLP-EAEDVDIHIDANDLRIDTMRSSGAGGQHVNTTDSAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV    E+SQH+N+  A  +L+ +LY+LE Q+ +          +++G G    +
Sbjct: 243 LPTGLVVTSS-EKSQHRNREIAMQVLKTRLYDLERQRIDSER--SADRASQVGSGDRSER 299

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       ++ GDLD+ + A  A  +
Sbjct: 300 IRTYNF-PQGRMSDHRINLTLYKLDQIMQGDLDEIIDALTADHQ 342


>gi|195953354|ref|YP_002121644.1| peptide chain release factor 1 [Hydrogenobaculum sp. Y04AAS1]
 gi|229576658|sp|B4U955|RF1_HYDS0 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|195932966|gb|ACG57666.1| peptide chain release factor 1 [Hydrogenobaculum sp. Y04AAS1]
          Length = 356

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 120/343 (34%), Positives = 183/343 (53%), Gaps = 8/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q+ +    K     + ++    K L ++ + L       K+    L D     EL
Sbjct: 10  IQDIEQKYAQTEEKLASLDITKDADTYKALSKDLKELSYIHELYKDYNKILKDIEDTKEL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134
             ++D   + ++  +NL    L+ E +           DS +  LE+ AGAGG E+  +A
Sbjct: 70  LKDKDLRELAEKELENLNTKLLQKEKELINVLTPKDANDSKNVILEIRAGAGGEEAALFA 129

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE++ +K   LE +     G K   + I+G N Y  LK E GVHR+ R+ 
Sbjct: 130 ADLLRMYQRYAERKGWKFNILEANKTGLGGYKEVIVSIEGKNVYSHLKYESGVHRVQRVP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  D++  + I+  D RI+T+RASGAGGQ+VNTT+SAVRITH
Sbjct: 190 ITESGGRIHTSTITVAVLPEADETDVV-INPQDLRIETFRASGAGGQYVNTTESAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           IPTG+ + CQ ERSQ +NK +A  +L A+L +   ++++E  +  +  K ++G G +   
Sbjct: 249 IPTGISISCQDERSQLQNKLKAMRILYARLKDFYEKQKKEETD--KERKEQVGTGERSEK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IR+Y       V D R N+      DVLDGDLDD + +  A +
Sbjct: 307 IRTYNFS-QNRVTDHRINLTLHKLQDVLDGDLDDIISSLQAKE 348


>gi|221639323|ref|YP_002525585.1| peptide chain release factor 1 [Rhodobacter sphaeroides KD131]
 gi|254790895|sp|B9KST8|RF1_RHOSK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|221160104|gb|ACM01084.1| Peptide chain release factor 1 [Rhodobacter sphaeroides KD131]
          Length = 351

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 115/342 (33%), Positives = 179/342 (52%), Gaps = 12/342 (3%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             V+R  FL  +           E   L RE   L   +  I   +  L D      +  
Sbjct: 9   QIVRRFEFLEARLSAGAA---PAEIAALSREYAELKPVVVEISAYRTALEDLAEAEAMLS 65

Query: 78  EEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           + +  ++ ++    L+       +  +   L    AD+  A LE+  G GG E+  +A  
Sbjct: 66  DPEMRALAEDEIPALRARIPGMEQALRLALLPKDAADARPAILEIRPGTGGEEAALFAGD 125

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           LLRMY R+AE + ++ E L++   E  GI+ AT  ++G  A+  LK E GVHR+ R+   
Sbjct: 126 LLRMYQRYAEGQGWRFELLDLAPSELGGIREATARVEGEGAFARLKYESGVHRVQRVPET 185

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           ++  R HTS +++ V P   + +++EI  +D RIDT R+SGAGGQHVNTTDSAVRITH+P
Sbjct: 186 EAQGRIHTSAATVAVLP-EAEEVDLEIPAADLRIDTMRSSGAGGQHVNTTDSAVRITHLP 244

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG++V    E+SQH+N+  A  +LRA+LY+LE Q+  +        K ++G G    +IR
Sbjct: 245 TGIIVTSS-EKSQHRNREIAMQVLRARLYDLERQRLADAR--SADRKAQVGSGDRSERIR 301

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   + D R N+   +   ++ GDL + + A  A  +
Sbjct: 302 TYNF-PQGRMTDHRINLTLYALPQIMAGDLSEVISALTAHDQ 342


>gi|157150598|ref|YP_001450441.1| peptide chain release factor 1 [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|172046863|sp|P47850|RF1_STRGC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157075392|gb|ABV10075.1| peptide chain release factor 1 [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 359

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 100/348 (28%), Positives = 164/348 (47%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E       +    QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           Q +A  LL+MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350


>gi|77463465|ref|YP_352969.1| peptide chain release factor 1 [Rhodobacter sphaeroides 2.4.1]
 gi|119361594|sp|Q3J2B6|RF1_RHOS4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|77387883|gb|ABA79068.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodobacter
           sphaeroides 2.4.1]
          Length = 351

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 115/342 (33%), Positives = 179/342 (52%), Gaps = 12/342 (3%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             V+R  FL  +           E   L RE   L   +  I   +  L D      +  
Sbjct: 9   QIVRRFEFLEARLSAGAA---PAEIAALSREYAELKPVVVEISAYRTALEDLAEAEAMLS 65

Query: 78  EEDDCSILQETSDNLQRIKL-EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           + +  ++ ++    L+       +  +   L    AD+  A LE+  G GG E+  +A  
Sbjct: 66  DPEMRALAEDEIPALRARIPGMEQALRLALLPKDAADARPAILEIRPGTGGEEAALFAGD 125

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           LLRMY R+AE + ++ E L++   E  GI+ AT  ++G  A+  LK E GVHR+ R+   
Sbjct: 126 LLRMYQRYAEGQGWRFELLDLAPSELGGIREATARVEGEGAFARLKYESGVHRVQRVPET 185

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           ++  R HTS +++ V P   + +++EI  +D RIDT R+SGAGGQHVNTTDSAVRITH+P
Sbjct: 186 EAQGRIHTSAATVAVLP-EAEEVDLEIPAADIRIDTMRSSGAGGQHVNTTDSAVRITHLP 244

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG++V    E+SQH+N+  A  +LRA+LY+LE Q+  +        K ++G G    +IR
Sbjct: 245 TGIIVTSS-EKSQHRNREIAMQVLRARLYDLERQRLADAR--SADRKAQVGSGDRSERIR 301

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   + D R N+   +   ++ GDL + + A  A  +
Sbjct: 302 TYNF-PQGRMTDHRINLTLYALPQIMAGDLSEVISALTAHDQ 342


>gi|163759877|ref|ZP_02166961.1| peptide chain release factor 1 [Hoeflea phototrophica DFL-43]
 gi|162282835|gb|EDQ33122.1| peptide chain release factor 1 [Hoeflea phototrophica DFL-43]
          Length = 361

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 114/346 (32%), Positives = 179/346 (51%), Gaps = 16/346 (4%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              +R   +  +        +      L  E   L   +  I+ +   L +   L  +  
Sbjct: 11  ELERRFGEVEARMAAG---PDPEAYVKLASEYSDLQPLVDQIRALDAALAERSDLEAMLQ 67

Query: 78  EEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +  +   +++ +++  R          E  +   L    AD   A LE+ AG GG+E+  
Sbjct: 68  DTANDKEMRDLAESELRSTKVRIGELEEQIEIMLLPKDAADERSAILEIRAGTGGSEAAL 127

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY R+A  RK+K E L   +GE  G K     I G   +  LK E GVHR+ R
Sbjct: 128 FAGDLFRMYERYASSRKWKVEVLSASEGEAGGYKEIIATISGKGVFARLKFESGVHRVQR 187

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P   + I+IE+   D RIDT RASGAGGQHVNTTDSAVRI
Sbjct: 188 VPETESGGRIHTSAATVAVLP-EAEDIDIEVRSEDIRIDTMRASGAGGQHVNTTDSAVRI 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV    E+SQH+N+A+A  +LRA+LY++E Q+ ++  +     ++++G G   
Sbjct: 247 THLPTGLVVTSS-EKSQHQNRARAMQVLRARLYDMERQRADDERSQS--RRSQVGSGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+       ++ G++D+ + A ++  +
Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTLYKLDRMMMGEIDEVVDALISDHQ 348


>gi|254526537|ref|ZP_05138589.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9202]
 gi|221537961|gb|EEE40414.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9202]
          Length = 364

 Score =  208 bits (530), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 101/341 (29%), Positives = 168/341 (49%), Gaps = 13/341 (3%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
              L  +  DP +  +  + + + RER  L+  +    ++ D   +      L  E  + 
Sbjct: 17  FENLEVQLADPDIANDPKKLESIARERSKLEPLVIDFNKLLDTDKEIEDSKNLLKENRND 76

Query: 83  SILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTESQDWANML 137
             ++   +    I  E + +  +            D     LE+ AGAGG E+  WA  L
Sbjct: 77  KEMESLINEELIILEEFKNELIQKTTIALLPKDPRDERSVMLEIRAGAGGNEACIWAGDL 136

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY R+ +K  +  +++   + +  G K   + +KG + Y  LK E GVHR+ R+   +
Sbjct: 137 ARMYERYGQKIGWSVKSVSASESDMGGFKELVISVKGDSVYSQLKFEAGVHRVQRVPATE 196

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  R HTS +++ V P   D +E++I  +D  I T R+ GAGGQ+VN  ++A+ + H PT
Sbjct: 197 SQGRVHTSTATVAVMP-EADPVEVKIDPTDLEIGTARSGGAGGQNVNKVETAIDLLHKPT 255

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314
           G+ V C QERSQ +N+ +A  +LRAKLYE++L+  E  A       +++G G    +IR+
Sbjct: 256 GIRVFCTQERSQLQNRERAMEILRAKLYEIQLK--EANAKERSQRLSQVGTGDRSEKIRT 313

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           Y  +      D R      S   +L G LD+ + A +A ++
Sbjct: 314 YNFKD-NRTTDHRLG-SNFSLEPILAGQLDEVINACIAQEQ 352


>gi|242309130|ref|ZP_04808285.1| peptide chain release factor 1 [Helicobacter pullorum MIT 98-5489]
 gi|239524171|gb|EEQ64037.1| peptide chain release factor 1 [Helicobacter pullorum MIT 98-5489]
          Length = 356

 Score =  208 bits (530), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 107/341 (31%), Positives = 176/341 (51%), Gaps = 9/341 (2%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           ++R   ++     P +  ++     L +E+  L+  +   K+    L        L  ++
Sbjct: 10  IERYEEISALLIKPEILNDIKRITELSKEQSDLEKLVQKSKQYLQNLQSIEENKSLLDDK 69

Query: 80  DDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +   + +E       + +      +   L     D  + YLE+ AG GG E+  +   L 
Sbjct: 70  ELGDLAKEEIKEAEAQNQELESEIKVLLLPKDPNDEKNIYLELRAGTGGDEAGIFVGDLF 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           + Y R+AE + +K E +  ++    G K    LIKG  AY  LK E G HR+ R+   +S
Sbjct: 130 KAYVRYAESKGWKVEIISSNENNFGGYKEVIALIKGKGAYSRLKYEGGTHRVQRVPETES 189

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS  ++ + P   D +E+ I+ +D +I+ +RA G GGQ VNTTDSAVRITHIPTG
Sbjct: 190 QGRIHTSAITVAIMP-EVDDVEVVINPNDLKIEVFRAGGHGGQCVNTTDSAVRITHIPTG 248

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315
           + V  Q E+SQHKNK +A  +L+A++YE EL+ + E     E+ K+++G G    +IR+Y
Sbjct: 249 ISVSMQDEKSQHKNKDKALKILKARIYEAELEAQME--QNAEARKSQVGSGDRSERIRTY 306

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
              P   + D R  +   S  +++ +GDLD  ++  +A  +
Sbjct: 307 NY-PQNRLSDHRIGLTLYSLEEIMLNGDLDQVIEPIIAYFQ 346


>gi|163850388|ref|YP_001638431.1| peptide chain release factor 1 [Methylobacterium extorquens PA1]
 gi|218528948|ref|YP_002419764.1| peptide chain release factor 1 [Methylobacterium chloromethanicum
           CM4]
 gi|240137464|ref|YP_002961935.1| peptide chain release factor RF-1 [Methylobacterium extorquens AM1]
 gi|254559642|ref|YP_003066737.1| peptide chain release factor RF-1 [Methylobacterium extorquens DM4]
 gi|226739112|sp|A9W1A4|RF1_METEP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790888|sp|B7L246|RF1_METC4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|163661993|gb|ABY29360.1| peptide chain release factor 1 [Methylobacterium extorquens PA1]
 gi|218521251|gb|ACK81836.1| peptide chain release factor 1 [Methylobacterium chloromethanicum
           CM4]
 gi|240007432|gb|ACS38658.1| peptide chain release factor RF-1 [Methylobacterium extorquens AM1]
 gi|254266920|emb|CAX22719.1| peptide chain release factor RF-1 [Methylobacterium extorquens DM4]
          Length = 361

 Score =  208 bits (530), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 110/349 (31%), Positives = 176/349 (50%), Gaps = 15/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   +  +  D     +      L RE   LD  ++ I   +    +   +  +
Sbjct: 9   LDAILARHDIVTAQLADGS--ADAGSIVQLSRELSELDGVVAAIHHYRLAEANLAGIRAM 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130
             E      ++  +   +    E   +     Q   L    AD   A LE+ AG GG E+
Sbjct: 67  IDEPGGDPEMRALAAEEKPEAEEALEQAHRALQLILLPKDAADEKSAILEIRAGTGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+AE + ++ E +   +G   G +     +KG + +  LK E G HR+
Sbjct: 127 ALFAGDLFRMYARYAESKGWRVEVISESEGTAGGYREVVAEVKGRSVFSRLKFESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++I ++E+D +IDT RA GAGGQHVN T+SA+
Sbjct: 187 QRVPDTETQGRIHTSAATVAVLP-EAEEVDIVVNEADLKIDTMRAQGAGGQHVNKTESAI 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTGVVV  Q+ERSQHKN+A+A ++LR+KL++ E   ++  +      K ++G G 
Sbjct: 246 RITHIPTGVVVFVQEERSQHKNRARAMSLLRSKLFDAERTAKD--SARAADRKAQVGSGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
              +IR+Y   P   V D R N+      +V+ G  LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQGRVTDHRINLTLYKLEEVMAGQALDEVIDALVTEHQ 351


>gi|89070966|ref|ZP_01158192.1| peptide chain release factor 1 [Oceanicola granulosus HTCC2516]
 gi|89043473|gb|EAR49687.1| peptide chain release factor 1 [Oceanicola granulosus HTCC2516]
          Length = 351

 Score =  208 bits (530), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 110/346 (31%), Positives = 175/346 (50%), Gaps = 16/346 (4%)

Query: 16  WDNAVQRLSFLNTKTED--PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D  V R  +L  +  +  P       E   + RE   L   +  I   +    +     
Sbjct: 7   LDQIVARQQYLEARMAEGAPG-----AEMIAIAREYSDLKPVVETIARYRALTAELEEAQ 61

Query: 74  ELALEEDDCSILQETS-DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +  E +   + +E      + +    +  +   L    AD+  A +E+  G GG E+  
Sbjct: 62  AMLAEPEMRGLAEEEIARLKEALPEAEQALRLALLPRDAADARPAMIEIRPGTGGEEAAL 121

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LLRMY R+A+ + +  E ++    E  GI+  T  + G   +  LK E GVHR+ R
Sbjct: 122 FAADLLRMYQRYADAKGWSFEIIDEQATELGGIRELTARVAGDGVFARLKFESGVHRVQR 181

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P     ++I+I+ +D RIDT RASGAGGQHVNTTDSAVRI
Sbjct: 182 VPETESGGRIHTSAATVAVLP-EAADVDIDIAPADIRIDTMRASGAGGQHVNTTDSAVRI 240

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV    E+SQH+N+  A  +L+ +L+++E Q+         + K ++G G   
Sbjct: 241 THLPTGLVVTSS-EKSQHRNREIAMQVLKTRLFDMERQR--ASDERSAARKAQVGSGDRS 297

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N+      ++L GDLD+ + A +A  +
Sbjct: 298 ERIRTYNF-PQGRMTDHRINLTLYRLEEILGGDLDETIDALIAETQ 342


>gi|119511140|ref|ZP_01630258.1| peptide chain release factor 2 [Nodularia spumigena CCY9414]
 gi|119464235|gb|EAW45154.1| peptide chain release factor 2 [Nodularia spumigena CCY9414]
          Length = 288

 Score =  208 bits (530), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 130/255 (50%), Positives = 177/255 (69%)

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
           +  + + LLSG  D+  A L ++AGAGGT++QDWA ML+RMYTRWAE   +K    E  +
Sbjct: 25  DQWELQQLLSGPYDAEGAVLTINAGAGGTDAQDWAFMLMRMYTRWAEDHGYKVSLAEESE 84

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
           G+EAGIKSATL I G  AYG+L+ E G HRLVRISP+++N +R TSF+ + + P +D S+
Sbjct: 85  GDEAGIKSATLEITGRYAYGYLRSETGTHRLVRISPFNANGKRQTSFAGVEIMPQLDHSV 144

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           ++EI E D  I T RA G GGQ+VN  ++AVRI H+PTG+ V+C +ERSQ +NK +A   
Sbjct: 145 QLEIPEKDLEITTSRAGGKGGQNVNKVETAVRIVHLPTGIAVRCTEERSQLQNKDKALAR 204

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           L+AKL  +  +++ +          E  WG QIR+YV  PYQMVKDLRTN+E T+ SDV+
Sbjct: 205 LKAKLLVIAREQKAQEVAEIRGDMVEASWGNQIRNYVFHPYQMVKDLRTNVETTAISDVM 264

Query: 340 DGDLDDFMKATLAIK 354
           DGDLD F++A L  +
Sbjct: 265 DGDLDSFIQAYLRQE 279


>gi|134102728|ref|YP_001108389.1| putative peptide chain release factor 1 [Saccharopolyspora
           erythraea NRRL 2338]
 gi|291007815|ref|ZP_06565788.1| putative peptide chain release factor 1 [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133915351|emb|CAM05464.1| putative peptide chain release factor 1 [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 357

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 119/348 (34%), Positives = 177/348 (50%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L  +  DP +  +   A+ L R    L   +   KE+     D     EL
Sbjct: 6   LDGLLAEYAELERRLADPEVHADQAGARKLGRRYAELTPVVRCSKELDQARSDLATAREL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E+   +   E+             +          D++D  LEV +G GG ES  +A 
Sbjct: 66  ADEDPAFAEEAESLAESVPALEAKLTELLL--PRDPHDASDVLLEVKSGEGGEESALFAG 123

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVH 188
            LLRMY R+AE++ ++TE L+  + +  G K AT+ +K           +  LK E GVH
Sbjct: 124 DLLRMYLRFAERQGWRTEILDATESDLGGYKDATVAVKTKAGDTGPDGVWSKLKFEGGVH 183

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + +     + +E+E+ E D RID YR+SG GGQ VNTTDS
Sbjct: 184 RVQRVPVTESQGRVHTSAAGV-LVYPEPEEVEVEVDEKDLRIDVYRSSGPGGQSVNTTDS 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307
           AVRITH+PTG+VV CQ E+SQ +NK +A  +LRA+L  L  ++ E  A+    S+   + 
Sbjct: 243 AVRITHLPTGIVVSCQNEKSQLQNKIRAIQVLRARLQALAEEEAEREASETRRSQVRTVD 302

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   + D R N +  +   VLDGDLD  + A +A  +
Sbjct: 303 RSERIRTYNF-PENRISDHRVNYKAYNLDQVLDGDLDGVLGALVAADR 349


>gi|113476549|ref|YP_722610.1| peptide chain release factor 1 [Trichodesmium erythraeum IMS101]
 gi|119361636|sp|Q110D7|RF1_TRIEI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|110167597|gb|ABG52137.1| bacterial peptide chain release factor 1 (bRF-1) [Trichodesmium
           erythraeum IMS101]
          Length = 369

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 105/348 (30%), Positives = 181/348 (52%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q  + L  +  DP + ++  E + L + R  L+  ++   E ++   +     E+
Sbjct: 10  LKSVEQTYNELTLRLADPDVAKDPSEFQKLAKARSSLEEVVNCYVEWKNAQEELADAKEI 69

Query: 76  ALE-----EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E     E       E  D   +++      +   L     D  +  LE+ AG GG E+
Sbjct: 70  LKEAVGDLEMQEMAKVEVEDLEAKLESLENQMKIALLPRDPNDDKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY+R++E + +K   L     +  G K A L IKG + Y  LK E GVHR+
Sbjct: 130 SIWAGDLVRMYSRYSENQSWKVSLLSESLADMGGFKEAILEIKGDHVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P   D +E+EI + D  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPVTEAGGRVHTSTATVAIMP-EVDDVEVEIDQKDIELSTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C QERSQ +N+ +A  +LRAKLYE++LQ+++   +     ++++G G 
Sbjct: 249 DLFHKPTGIRIFCTQERSQLQNRERAMQILRAKLYEIKLQEQQAEVSSI--RRSQVGTGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R N +  S   +L+GD+++ ++A +   +
Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLN-QNFSLVPLLEGDIENVIQACITQDQ 352


>gi|307706536|ref|ZP_07643343.1| peptide chain release factor 1 [Streptococcus mitis SK321]
 gi|307617991|gb|EFN97151.1| peptide chain release factor 1 [Streptococcus mitis SK321]
          Length = 359

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 97/348 (27%), Positives = 161/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASSRDTVTAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E       +    QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLIMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E ++   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDLDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|293365352|ref|ZP_06612069.1| peptide chain release factor RF1 [Streptococcus oralis ATCC 35037]
 gi|307703894|ref|ZP_07640835.1| peptide chain release factor 1 [Streptococcus oralis ATCC 35037]
 gi|291316802|gb|EFE57238.1| peptide chain release factor RF1 [Streptococcus oralis ATCC 35037]
 gi|307622729|gb|EFO01725.1| peptide chain release factor 1 [Streptococcus oralis ATCC 35037]
          Length = 359

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 97/348 (27%), Positives = 161/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E       +    QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDVDLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ + P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLIMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|323351595|ref|ZP_08087249.1| peptide chain release factor RF1 [Streptococcus sanguinis VMC66]
 gi|322122081|gb|EFX93807.1| peptide chain release factor RF1 [Streptococcus sanguinis VMC66]
 gi|324992933|gb|EGC24853.1| peptide chain release factor RF1 [Streptococcus sanguinis SK405]
 gi|325687437|gb|EGD29458.1| peptide chain release factor RF1 [Streptococcus sanguinis SK72]
 gi|325694524|gb|EGD36433.1| peptide chain release factor RF1 [Streptococcus sanguinis SK150]
 gi|325696481|gb|EGD38371.1| peptide chain release factor RF1 [Streptococcus sanguinis SK160]
 gi|327462229|gb|EGF08556.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1]
 gi|327470059|gb|EGF15523.1| peptide chain release factor RF1 [Streptococcus sanguinis SK330]
 gi|327474249|gb|EGF19656.1| peptide chain release factor RF1 [Streptococcus sanguinis SK408]
 gi|327489584|gb|EGF21376.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1058]
          Length = 359

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 99/348 (28%), Positives = 163/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKKVLQNITDAEEM 66

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +       +    QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           Q +A  LL+MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350


>gi|86132255|ref|ZP_01050850.1| peptide chain release factor 1 [Dokdonia donghaensis MED134]
 gi|85817174|gb|EAQ38357.1| peptide chain release factor 1 [Dokdonia donghaensis MED134]
          Length = 359

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 97/343 (28%), Positives = 167/343 (48%), Gaps = 12/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                QR   ++     P +  +      L +E   L   +   +E  +   +     E+
Sbjct: 5   LQIVKQRFDEVSDLIIQPDIISDQKRYVSLNKEYSDLKALMDVREEYIELTDNFKEAEEI 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  +++      +  K  +   +       +     D+ +  +E+ AG GG E+ 
Sbjct: 65  IADGSDAEMVEMAKMQYEEAKSGIPELEEKIRMMLIPKDPEDAKNVVVEIRAGTGGDEAS 124

Query: 132 DWANMLLRMYTRWAEKR-KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            +A  L RMYT++ +    +K   ++  +G   G K     I G + YG +K E GVHR+
Sbjct: 125 IFAGDLYRMYTKYVDSVPGWKHSTVDYSEGTSGGFKEIQFEITGQDVYGTMKFEAGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P  ++     I   D R+D + +SG GGQ VNTT SAV
Sbjct: 185 QRVPQTETQGRVHTSAATVMVLPEAEEFDVQ-IEPKDVRVDFFCSSGPGGQSVNTTYSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+THIPTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL K++E         +++  G 
Sbjct: 244 RLTHIPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDLELAKKQEE--DAAKRNSQVSSGD 301

Query: 311 Q---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +   IR+Y   P   V D R  +      ++++GD+   ++  
Sbjct: 302 RSAKIRTYNY-PQGRVTDHRIGLTLYDLQNIINGDIQKILEEL 343


>gi|332529974|ref|ZP_08405924.1| peptide chain release factor 1 [Hylemonella gracilis ATCC 19624]
 gi|332040447|gb|EGI76823.1| peptide chain release factor 1 [Hylemonella gracilis ATCC 19624]
          Length = 369

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 125/351 (35%), Positives = 183/351 (52%), Gaps = 15/351 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QRL  LN       +  ++ +   L RE   +        + + R  D     E+
Sbjct: 9   LERYAQRLDELNFLLSREDIMGDMKQFLALSREHNEVTAIAGRYAQYRQRETDLSSAREM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             E D   I QE         + +E + Q   L     D+ +A+LE+ AG GG ES  +A
Sbjct: 69  LAEPDMTDIAQEEITAAMADLVRLEDELQRLLLPKDPDDARNAFLEIRAGTGGDESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN--------AYGWLKGEQG 186
             LLRMYTR+A++R +KTE +     E  G K   L I G N         YG L+ E G
Sbjct: 129 ADLLRMYTRYADQRGWKTEIMSESPSELGGYKEVVLRIDGGNAESPSGLGVYGELRFESG 188

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   ++  R HTS  ++ V P  D+   ++I+ ++ RIDT+RASGAGGQH+N T
Sbjct: 189 GHRVQRVPATETQGRIHTSACTVAVLPEPDEQEAVQINPAELRIDTFRASGAGGQHINKT 248

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTG+V +CQ +RSQH+NKA+A  +L A++ E E  +R   A    + +  I
Sbjct: 249 DSAVRITHLPTGIVAECQDDRSQHRNKAKALQVLAARIQEKERSER--AAKDAATRRGLI 306

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           G G    +IR+Y   P   + D R N+     S V++G LDD ++A    +
Sbjct: 307 GSGDRSDRIRTYNF-PQGRLTDHRINLTLYKLSQVMEGALDDVVQALRHAR 356


>gi|289706369|ref|ZP_06502727.1| peptide chain release factor 1 [Micrococcus luteus SK58]
 gi|289556864|gb|EFD50197.1| peptide chain release factor 1 [Micrococcus luteus SK58]
          Length = 369

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 109/358 (30%), Positives = 171/358 (47%), Gaps = 17/358 (4%)

Query: 13  LFD-------WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           +FD        D  +     L  +  DP + Q+   A+ L R    L   ++  +     
Sbjct: 1   MFDSEQRREAVDRLLAEHRELTARLSDPAVHQDPALARRLNRRFAELGAVVTAHRAWSAA 60

Query: 66  LCDNLILLELALEEDDCSILQETSD--NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           + +     ELA   DD +                  E  +   +     D+ D  LE+  
Sbjct: 61  VEELADARELAAAGDDDAAAFAAEVPGLEAAEAEAAERLRRLLIPRDPDDARDVILEIKG 120

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI------KGPNA 177
           G GG E+  +A  LLRMY R+AE R +KTE L     +  G K   + +           
Sbjct: 121 GEGGEEAALFAGDLLRMYLRYAESRGWKTEVLSATHSDLGGYKDVHVAVRGSAADPADGV 180

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           Y  LK E GVHR+ R+   +S  R HTS + + V P VD   E+ +  +D ++D +R+SG
Sbjct: 181 YARLKFEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEVDAPDEVHLDPNDLKVDVFRSSG 240

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQ VNTTDSAVR+TH+PTG+VV  Q E+SQ +N+  A  +LR++L E +  +++   +
Sbjct: 241 PGGQSVNTTDSAVRLTHLPTGIVVSMQNEKSQIQNREAALRVLRSRLLERQRAEQDAEDS 300

Query: 298 IGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +++   +    +IR+Y   P   + D RT  +  +   VLDGDL+  + + LA+ 
Sbjct: 301 AARAAQVRTMDRSERIRTYNF-PENRIADHRTGYKAHNLDAVLDGDLEAVIASCLALD 357


>gi|322389535|ref|ZP_08063086.1| peptide chain release factor RF1 [Streptococcus parasanguinis ATCC
           903]
 gi|321143810|gb|EFX39237.1| peptide chain release factor RF1 [Streptococcus parasanguinis ATCC
           903]
          Length = 359

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 101/348 (29%), Positives = 164/348 (47%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E       +    QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKEAGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           Q +A  LL+MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D RID Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|49473852|ref|YP_031894.1| peptide chain release factor 1 [Bartonella quintana str. Toulouse]
 gi|61214617|sp|Q6G0R0|RF1_BARQU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|49239355|emb|CAF25688.1| Peptide chain release factor 1 [Bartonella quintana str. Toulouse]
          Length = 359

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 180/344 (52%), Gaps = 18/344 (5%)

Query: 18  NAVQRLSFLNTKTE-DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   + ++   +P    +      L  E   L   ++ I+ +     +   L  + 
Sbjct: 11  QLEKRFEIIESQMAKNP----DSGTYVKLASEYADLQPIVTSIRTLNALSIEITELETII 66

Query: 77  LEEDDCSILQETSDN-----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            ++     ++  +        Q+++   +  Q   L     D   A +E+ AG GG+E+ 
Sbjct: 67  SDKLTDVEMRNLAQEELPPLFQKMEKLEKELQILLLPKDITDEKSAIIEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L RMY R+A    +K E + +++GE  G K     I G   +  LK E GVHR+ 
Sbjct: 127 LFVGDLFRMYERYANAYNWKVEVISLNEGEVGGYKEIIATISGKGVFSKLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAVR
Sbjct: 187 RVPETETSGRIHTSAATVAVLP-EAEEIDIEIRPEDIRIDTMRASGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG++V  Q E+SQH+N+A+A  +LRA+L+++E +K    +    S K ++G G  
Sbjct: 246 ITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIEQKK--AESERSASRKNQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       +L+GDLD+ + A ++
Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLYKLDRILEGDLDELINALIS 345


>gi|126663551|ref|ZP_01734548.1| peptide chain release factor 1 [Flavobacteria bacterium BAL38]
 gi|126624499|gb|EAZ95190.1| peptide chain release factor 1 [Flavobacteria bacterium BAL38]
          Length = 357

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 101/346 (29%), Positives = 168/346 (48%), Gaps = 12/346 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D      QR   ++     P +  +      L +E + L   +   +E      +   
Sbjct: 1   MLDRLQYVKQRFDEISDLIIQPDVIADQKRYVQLNKEYKDLKGLVEKREEYIALDGNIKE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS----GEADSNDAYLEVHAGAGG 127
             E+  +  D  +++     L   K  +   + E           D+ +  +E+ AG GG
Sbjct: 61  ANEIIADGSDAEMVEMAKMQLDEAKDRLPQLEEEIKFMLIPKDPEDAKNVMVEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMYT++ E R ++T  ++I +G   G K     + G + YG LK E GV
Sbjct: 121 DEASIFAGDLFRMYTKYCEARGWRTSVVDISEGTSGGFKEVIFEVTGEDVYGTLKFEAGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P  ++     I  +D R+D + +SG GGQ VNTT 
Sbjct: 181 HRVQRVPQTETQGRVHTSAATVMVLPEAEEFDVQ-IDMNDVRVDFFCSSGPGGQSVNTTK 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPTG+V QCQ ++SQHKNK +A ++LR++LYE EL  ++          +++ 
Sbjct: 240 SAVRLTHIPTGLVAQCQDQKSQHKNKDKALDVLRSRLYEKELAIKQAE--DATKRSSQVS 297

Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            G +   IR+Y       V D R  ++      V++G +  F+   
Sbjct: 298 SGDRSAKIRTYNYS-QGRVTDHRIGLDVFDMDGVMNGKIQKFVDEL 342


>gi|22298070|ref|NP_681317.1| peptide chain release factor 2 [Thermosynechococcus elongatus BP-1]
 gi|22294248|dbj|BAC08079.1| peptide chain release factor 2 [Thermosynechococcus elongatus BP-1]
          Length = 290

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 131/255 (51%), Positives = 180/255 (70%)

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
              + E LLSG  D N+A + ++AGAGGT++QDWA MLLRMYTRWAE+  ++T   E+ +
Sbjct: 32  NRWELEQLLSGPYDKNNAIVTINAGAGGTDAQDWAEMLLRMYTRWAERHGYQTHLAELSE 91

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
           GEEAGIKSATL I+G  AYG+L+ E+G HRLVRISP+++N +R TSF+ + V P +D S+
Sbjct: 92  GEEAGIKSATLEIRGRYAYGYLRSEKGTHRLVRISPFNANGKRQTSFAGVDVMPELDQSV 151

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
            +EI ESD  I T R+ G GGQ+VN  ++AVRI H PTG+ V+C QERSQ +NK +A  +
Sbjct: 152 TVEIPESDLEITTSRSGGKGGQNVNKVETAVRIVHKPTGLAVRCTQERSQLQNKEKALAI 211

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           L+AKL  +  +++ +          E  WG QIR+YV  PYQ+VKDLRT +E T+  DV+
Sbjct: 212 LKAKLLVIAQEQKAKEIADIRGEAVEAAWGNQIRNYVFHPYQLVKDLRTEVETTAIQDVM 271

Query: 340 DGDLDDFMKATLAIK 354
           DG+LD F++A L  +
Sbjct: 272 DGNLDPFIQAYLRQQ 286


>gi|330807738|ref|YP_004352200.1| peptide chain release factor 2 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375846|gb|AEA67196.1| Putative Peptide chain release factor 2 [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 293

 Score =  208 bits (530), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 164/290 (56%), Positives = 212/290 (73%), Gaps = 1/290 (0%)

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D   LL++A+EE+D   + +    L R+   +   +F  + SGE D N+AYL++ A
Sbjct: 3   SGLADCRDLLDMAVEENDEGAVGDVVAELTRLDENLAKLEFRRMFSGEMDMNNAYLDIQA 62

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK AT+ IKG  A+GWL+ 
Sbjct: 63  GSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRT 122

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEIEI+ +D RIDTYR+SGAGGQHV
Sbjct: 123 EIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIEINPADLRIDTYRSSGAGGQHV 182

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRA+LYE E+QKR   +   E +K
Sbjct: 183 NTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTK 242

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           ++IGWG QIRSYVL     +KDLRT+IE++    VLDGD+D+++ A+L  
Sbjct: 243 SDIGWGHQIRSYVLD-ASRIKDLRTSIERSDCDKVLDGDIDEYLIASLKQ 291


>gi|300775397|ref|ZP_07085259.1| peptide chain release factor RF1 [Chryseobacterium gleum ATCC
           35910]
 gi|300506137|gb|EFK37273.1| peptide chain release factor RF1 [Chryseobacterium gleum ATCC
           35910]
          Length = 361

 Score =  208 bits (530), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 92/346 (26%), Positives = 168/346 (48%), Gaps = 12/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QR + +      P +  +      L +E   L   +    + +  L       E+
Sbjct: 9   LEAIKQRYNEVADLIIQPDVISDQKRYSSLNKEYSDLGKIVRVYDQYKGALDSIAESEEI 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  ++    +     + ++   + E          AD  +  +E+ AG GG E+ 
Sbjct: 69  IADGSDRDLVDLAKEEKLEAQAKIPGLEEELKVLLIPKDPADDKNVIVELRAGTGGDEAA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   + RMYT + + + ++ E  + ++  + G K   + ++G   YG +K E GVHR+ 
Sbjct: 129 IFVEDIYRMYTMYFKAKGWRHEVTDSNEAAK-GYKELIMKVEGEGVYGIMKFESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P   + +++EI+ +D  + T R+ GAGGQ+VN  ++ V+
Sbjct: 188 RVPETESQGRVHTSAITVAVLP-EAEEVDVEINPADIEMQTSRSGGAGGQNVNKVETKVQ 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +TH P+G+VV CQQ RSQ  N+  A  MLRAKLY+++LQ+ +   +I    KT +  G +
Sbjct: 247 LTHKPSGLVVVCQQARSQLANRELAMEMLRAKLYDIKLQEVQ--GDIAAQRKTMVSTGDR 304

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              I++Y   P   V D R N    +    ++GD+ + + A +  +
Sbjct: 305 SAKIKTYNY-PQGRVTDHRINKSMYNLDAYMNGDISEMIDAVIMAE 349


>gi|332712139|ref|ZP_08432067.1| bacterial peptide chain release factor 1 [Lyngbya majuscula 3L]
 gi|332348945|gb|EGJ28557.1| bacterial peptide chain release factor 1 [Lyngbya majuscula 3L]
          Length = 370

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 101/348 (29%), Positives = 181/348 (52%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72
            ++  Q    L  +  DP +  +  E + + + R  L+  ++     +    D      +
Sbjct: 10  LNSVEQTYHELTRRLADPDIATDPNELQRVAKARASLEEVVATYDNWKKTQEDLAGARQI 69

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGTES 130
           L+ +  E +   +        + K+E   ++ + L       D  +  LE+ AG GG E+
Sbjct: 70  LKESTGEPEMQEMAALEVEELQTKVEHLERELKILLLPKDPNDEKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY+R++E + ++ + L     +  G K A L I+G   Y  LK E GVHR+
Sbjct: 130 SIWAGDLVRMYSRYSESQNWRVKLLSESLADMGGFKEAILEIQGEQVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   D +++EI   +  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPVTEAGGRVHTSTATVAVMP-EVDEVDVEIDPKEIEISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +N+ +A  +LRAKLYE++LQ+++E   +    + ++G G 
Sbjct: 249 DLYHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEIKLQEQQE--AVTSMRRAQVGTGA 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R   +  S + +L+GDL+  ++A ++  +
Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLG-QNYSLAPLLEGDLEGLIQACISQDQ 352


>gi|257464973|ref|ZP_05629344.1| peptide chain release factor 2 [Actinobacillus minor 202]
 gi|257450633|gb|EEV24676.1| peptide chain release factor 2 [Actinobacillus minor 202]
          Length = 248

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 145/247 (58%), Positives = 188/247 (76%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D+ D Y+++ AG+GGTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+K
Sbjct: 1   MFSGQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSF++ +VYP VD+ I IE++ +
Sbjct: 61  SATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEVDEDINIEVNPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITHIP+ +VVQCQ  RSQH+NK QA   L+AKLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNKTESAVRITHIPSCIVVQCQNGRSQHQNKDQAMKQLKAKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +E+ K+       E SK++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F
Sbjct: 181 MEMMKQNAEKQAMEESKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKF 239

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 240 IEASLKA 246


>gi|323136601|ref|ZP_08071682.1| peptide chain release factor 1 [Methylocystis sp. ATCC 49242]
 gi|322397918|gb|EFY00439.1| peptide chain release factor 1 [Methylocystis sp. ATCC 49242]
          Length = 356

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 114/343 (33%), Positives = 177/343 (51%), Gaps = 15/343 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  ++R   +  K        +      L RER  LD+ +  I+  +D   +   L  +
Sbjct: 7   LDLILRRYDEIGEKLAGG---ADGQTFVALSRERATLDDVVDAIRAWRDAQREVDDLAAM 63

Query: 76  ALEEDDCSILQ-----ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +      ++     ET    ++++      +   L   EAD     LEV AG GG E+
Sbjct: 64  LADSSLDPEMRALAESETDGAREKLEAAANTLRLALLPKDEADEKGVILEVRAGTGGDEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L R Y ++A  + ++ E +    G   G K     I G   YG LK E GVHR+
Sbjct: 124 ALFAGDLFRAYQKYAALKGWRVELVSESPGALGGFKEIVAEIIGRGVYGRLKFESGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++I+I E D +IDT RA GAGGQHVN T+SA+
Sbjct: 184 QRVPETETQGRIHTSAATVAVLPQ-AEDVDIDIDEKDLQIDTMRAQGAGGQHVNKTESAI 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIP+G+VV  Q+ERSQH+NKA+A N+LR++LY+ E Q+ ++     +  K ++G G 
Sbjct: 243 RITHIPSGIVVMMQEERSQHRNKAKAMNVLRSRLYDAERQRLDKER--SDDRKQQVGSGD 300

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              +IR+Y   P   V D R N+       V++G+ D+ + A 
Sbjct: 301 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGEFDEIIDAL 342


>gi|21910335|ref|NP_664603.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS315]
 gi|28895910|ref|NP_802260.1| peptide chain release factor 1 [Streptococcus pyogenes SSI-1]
 gi|25091126|sp|Q8K7I2|RF1_STRP3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|21904531|gb|AAM79406.1| putative peptide chain release factor 1 [Streptococcus pyogenes
           MGAS315]
 gi|28811160|dbj|BAC64093.1| putative peptide chain release factor 1 [Streptococcus pyogenes
           SSI-1]
          Length = 359

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 97/348 (27%), Positives = 162/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  +       E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQTISDAEEM 66

Query: 76  ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +      L+E +    +      +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D RID Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ +G G 
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQ 350


>gi|110635328|ref|YP_675536.1| peptide chain release factor 1 [Mesorhizobium sp. BNC1]
 gi|119361558|sp|Q11E04|RF1_MESSB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|110286312|gb|ABG64371.1| bacterial peptide chain release factor 1 (bRF-1) [Chelativorans sp.
           BNC1]
          Length = 359

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 113/348 (32%), Positives = 178/348 (51%), Gaps = 18/348 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R   + T+    P           L  E   L    + I+ ++    +   L  +
Sbjct: 10  DQVLKRFELIETQMAAGPS----PDAYVKLASEYSELQEVANSIRALRKAEAELEDLDTM 65

Query: 76  -----ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
                   E       +  +   R++   +  Q   L   EAD  +A LE+ AG GG E+
Sbjct: 66  LADKSIDREIRELAEIDREEVESRVEDMQQKLQVLLLPKDEADEKNAILEIRAGTGGDEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A +R ++ E +   +GE  G K     + G   +  LK E GVHR+
Sbjct: 126 ALFAGDLFRMYERYASERGWRVEVVSASEGEAGGYKEIIASVTGRGVFSRLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+++I   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 186 QRVPATEAQGRIHTSAATVAVLP-EAEDIDVDIKPEDIRIDTMRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG++V    E+SQH+N+A+A  +LRA+L+++E  +        E+ + ++G G 
Sbjct: 245 RITHLPTGIMV-VSAEKSQHQNRARAMQILRARLFDMERSR--AANERSEARRLQVGTGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V++G+LD+ + A +A  +
Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGELDEVIDALIADHQ 348


>gi|194398144|ref|YP_002037655.1| peptide chain release factor 1 [Streptococcus pneumoniae G54]
 gi|238690818|sp|B5E4D9|RF1_STRP4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|194357811|gb|ACF56259.1| peptide chain release factor 1 [Streptococcus pneumoniae G54]
          Length = 359

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 160/348 (45%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + +   +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E       +    QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEXDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|25027860|ref|NP_737914.1| peptide chain release factor 1 [Corynebacterium efficiens YS-314]
 gi|259506251|ref|ZP_05749153.1| peptide chain release factor 1 [Corynebacterium efficiens YS-314]
 gi|81749553|sp|Q8FQ31|RF1_COREF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|23493143|dbj|BAC18114.1| putative peptide chain release factor 1 [Corynebacterium efficiens
           YS-314]
 gi|259166155|gb|EEW50709.1| peptide chain release factor 1 [Corynebacterium efficiens YS-314]
          Length = 358

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 116/348 (33%), Positives = 174/348 (50%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +     L  +  DP L  +   A+ + +    L   I+  +++     D     E+
Sbjct: 8   VDDILAEYHGLEEQMADPALHNDPAAARRVGKRYSELQPIINVHRQLVQVRDDLEAAREM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D     E       +    E          E D +D  +E+ AGAGG E+  +A 
Sbjct: 68  --AHEDHEFAAEAERLEVELVELEEKLADLLAPRDEHDGDDIVMEIKAGAGGEEAALFAG 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-----YGWLKGEQGVHRL 190
            LLRMY ++A+K  F  E L+  + +  G+K  TL I+         +   K E GVHR+
Sbjct: 126 DLLRMYQKYADKHGFIIEVLDSAESDLGGVKDITLSIRSRQPSRDGAWSQFKFEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R  TS + + VYP  D+  ++EI E + R+D YR+SG GGQ VNTTDSAV
Sbjct: 186 QRVPVTESQGRIQTSAAGVLVYPEPDEVEDVEIDEKEIRVDVYRSSGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307
           RITH+PTG+VV CQ+ERSQ +N+A+A  +L A+L    LQK E  A   E   ++I    
Sbjct: 246 RITHLPTGIVVTCQKERSQIQNRARAMQVLAARL--QALQKEEADAEAAEGRASQIRTMD 303

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   + D R   +  +   VL+G+LDD   A  A ++
Sbjct: 304 RSERIRTYNW-PENRISDHRIGFKANNLDAVLNGELDDLFTALRAAER 350


>gi|56808656|ref|ZP_00366381.1| COG0216: Protein chain release factor A [Streptococcus pyogenes M49
           591]
 gi|71903502|ref|YP_280305.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS6180]
 gi|71910676|ref|YP_282226.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS5005]
 gi|209559423|ref|YP_002285895.1| peptide chain release factor 1 [Streptococcus pyogenes NZ131]
 gi|119361623|sp|Q48TL0|RF1_STRPM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238054473|sp|B5XLI8|RF1_STRPZ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71802597|gb|AAX71950.1| bacterial peptide chain release factor 1 [Streptococcus pyogenes
           MGAS6180]
 gi|71853458|gb|AAZ51481.1| bacterial peptide chain release factor 1 [Streptococcus pyogenes
           MGAS5005]
 gi|209540624|gb|ACI61200.1| Peptide chain release factor 1 [Streptococcus pyogenes NZ131]
          Length = 359

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 96/348 (27%), Positives = 162/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  +       E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQTISDAEEM 66

Query: 76  ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +      L+E +    +      +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ +G G 
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQ 350


>gi|257785108|ref|YP_003180325.1| peptide chain release factor 1 [Atopobium parvulum DSM 20469]
 gi|257473615|gb|ACV51734.1| peptide chain release factor 1 [Atopobium parvulum DSM 20469]
          Length = 355

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 112/335 (33%), Positives = 165/335 (49%), Gaps = 14/335 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V   + L  K  DP +  +  E   + +E  +  + ++   +    L D     EL
Sbjct: 5   LEKIVDAYAELEQKLADPAVVSDPKEYARVAKEHSNQADLVAHANKYITALDDIEAAKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
                D    +   +++   +  +   + E           D  D  +E+ AG GG E+ 
Sbjct: 65  LNATSDPEEKEMLQEDIAANEEMLPQLEDEIKVMLIPGDPNDEKDTIVEIRAGVGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MY R+AE R +KTE L     E  G K+    + G   Y  +K E GVHR+ 
Sbjct: 125 IFAGDLFKMYERFAEARGWKTEILSSSPSEAGGFKTIEFKVTGDKVYSVMKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R  TS +++ V P   D I+I+I++ D RIDTY ASG GGQ VNTT SAVR
Sbjct: 185 RVPKTESQGRIQTSTATVAVLP-EADEIDIQINQEDLRIDTYCASGPGGQCVNTTYSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---W 308
           ITH+PT  VVQ Q +RSQ +N+     MLRA+LYE+EL++++     G    ++IG    
Sbjct: 244 ITHLPTNTVVQSQDQRSQIQNREVCMQMLRARLYEMELERQQAEQ--GAERLSQIGHGAR 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIE-KTSPSDVLDGD 342
             +IR+Y  QP   V D R       +   VL GD
Sbjct: 302 SEKIRTYN-QPQDRVTDHRVGFNGTYN--GVLLGD 333


>gi|303232564|ref|ZP_07319250.1| peptide chain release factor 1 [Atopobium vaginae PB189-T1-4]
 gi|302481351|gb|EFL44425.1| peptide chain release factor 1 [Atopobium vaginae PB189-T1-4]
          Length = 354

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 111/334 (33%), Positives = 168/334 (50%), Gaps = 13/334 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL---IL 72
            +  +   + L  K  DP +  +  E   + +E  H    ++  KE    L D      +
Sbjct: 5   LEKLIAAYAELEKKMVDPAVVADQKEYTRIAKEHAHQSELVALAKEYIAALDDIEAAKEM 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L  A  ++   +  + + N +++    +  +   +     D  D  +E+ A AGG E+  
Sbjct: 65  LHEASSDEREMLQADIAANEEKLPALEDDIKIMLIPGDPNDEKDTIVEIRAAAGGDEAAI 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L +MY R+A+ + +K E L     E  G K+    + G   Y  +K E GVHR+ R
Sbjct: 125 FAGDLYKMYERFADSKHWKIEVLSSSPSEAGGFKTIEFKMLGDKVYSVMKYESGVHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R  TS +++ V P   D I+++I  +D RIDTY ASG GGQ VNTT SAVRI
Sbjct: 185 VPKTESQGRIQTSTATVAVLP-EADEIDVQIDPTDLRIDTYCASGPGGQCVNTTYSAVRI 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311
           TH+PT  VVQ Q +RSQ +N+     MLRA+LYE+EL+K++     G    ++IG G + 
Sbjct: 244 THLPTNTVVQSQDQRSQIQNREVCMQMLRARLYEMELEKQQAEQ--GAERLSQIGRGNRS 301

Query: 312 --IRSYVLQPYQMVKDLRTNI-EKTSPSDVLDGD 342
             IR+Y  QP   V D R       +   VL GD
Sbjct: 302 EKIRTYN-QPQDRVTDHRIGFNSTYN--GVLLGD 332


>gi|239982315|ref|ZP_04704839.1| peptide chain release factor 1 [Streptomyces albus J1074]
 gi|291454159|ref|ZP_06593549.1| peptide chain release factor 1 [Streptomyces albus J1074]
 gi|291357108|gb|EFE84010.1| peptide chain release factor 1 [Streptomyces albus J1074]
          Length = 358

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 114/350 (32%), Positives = 174/350 (49%), Gaps = 16/350 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +  +   + +  +  DP +  +   A+ L +    L   +   +  +    D   
Sbjct: 1   MFEAVEELIGEHADIEKRLADPAVHADQAGARKLNKRYAELTPIVGTYRSWKQTGEDIET 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EL    DD     E  +     +   E  +   +    +D  D  LE+ AGAGG ES 
Sbjct: 61  AREL--AADDPDFAAEVKELEAAREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN----------AYGWL 181
            +A  LLRMY R+AE+  +KTE ++  + E  G K   + +K              +  L
Sbjct: 119 LFAGDLLRMYLRYAERVGWKTELIDSTESELGGYKDVQVAVKTKGGQGATEPGQGVWARL 178

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   +S  R HTS + + V P   + I++EI+++D RID YR+SG GGQ
Sbjct: 179 KYEGGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEIDVEINQNDLRIDVYRSSGPGGQ 237

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LR++L     ++ E  A     
Sbjct: 238 SVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREAADARR 297

Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           S+   +    +IR+Y   P   + D R   +  +   VLDG+LD  ++A 
Sbjct: 298 SQVRTVDRSEKIRTYNY-PENRISDHRVGFKAYNLDQVLDGELDAVIQAC 346


>gi|110003948|emb|CAK98288.1| peptide chain release factor 1 protein [Spiroplasma citri]
          Length = 358

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 181/347 (52%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++R + +N +   P +  +V +   L +E+  L+  ++     ++ L +      +
Sbjct: 9   LETMLKRWNLINEELTKPEIVNDVKKLTSLAKEQAQLEETVALYLNYKNVLNNINEAKLI 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +++   + L+  ++  E    E           D  +   E+   AGG E  
Sbjct: 69  LETEKDYELIELAKEELKTSEIRKEQLAAELKVILLPKDPNDDKNVIFEIRGAAGGDEGN 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++AE++ +K E +E ++ E  G  + + ++KG   Y  +K E G HR+ 
Sbjct: 129 IFAGDLYRMYIKYAEQQHWKVELIEANESEAGGFSTISFMVKGDRVYSKMKFESGAHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++ V P   + ++ EI  +D +IDTYRASGAGGQHVNTTDSAVR
Sbjct: 189 RIPKTESKGRVHTSTATVAVLP-EIEEVDFEIKTADLKIDTYRASGAGGQHVNTTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG VV  Q  RSQH NKA A   LR+KLYE + +K  E        K  +G G  
Sbjct: 248 ITHLPTGFVVTSQDGRSQHDNKALAMQHLRSKLYEEQQRKINEERWTL--RKDAVGTGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R N+       +++G+LD+ + A +  ++
Sbjct: 306 SEKIRTYNY-PQNRVTDHRINLTLQKLDQIMEGNLDEIVVALINEEQ 351


>gi|121602027|ref|YP_988678.1| peptide chain release factor 1 [Bartonella bacilliformis KC583]
 gi|166223530|sp|A1URS5|RF1_BARBK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|120614204|gb|ABM44805.1| peptide chain release factor 1 [Bartonella bacilliformis KC583]
          Length = 359

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 118/348 (33%), Positives = 180/348 (51%), Gaps = 18/348 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               +R   + ++    P    N      L  E   L   ++ I+ +     +   L  +
Sbjct: 10  KQIEKRFEIIESQMAQNP----NAETYVKLASEYAELQQIVTPIRTLNALYKEVTELEAM 65

Query: 76  ALEEDDCSILQETSDN-----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           A      + +   +        Q+I+   +  Q   L    AD   A +E+ AG GG+E+
Sbjct: 66  ANTTQIDADMYALAQEELVLLRQKIEQLEQEIQILLLPKDIADEKSAIIEIRAGTGGSEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A   K+K E + + D E  G K     I G   +  LK E GVHR+
Sbjct: 126 ALFAGDLFRMYERYANAHKWKVEVVSLSDSEVGGYKEIIATISGKGVFSKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +++ R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 186 QRVPETETSGRIHTSAATVAVLP-EAEEIDIEIRPEDIRIDTMRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LR++L+++E QK    +    S KT++G G 
Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARALQILRSRLFDIERQK--AESERSASRKTQVGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       +++GDLD+ +   ++  +
Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRIMEGDLDELINPLISNHQ 348


>gi|157736354|ref|YP_001489037.1| peptide chain release factor 1 [Arcobacter butzleri RM4018]
 gi|315635491|ref|ZP_07890757.1| peptide chain release factor RF1 [Arcobacter butzleri JV22]
 gi|166977359|sp|A8EQZ4|RF1_ARCB4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157698208|gb|ABV66368.1| peptide chain release factor 1 [Arcobacter butzleri RM4018]
 gi|315480249|gb|EFU70916.1| peptide chain release factor RF1 [Arcobacter butzleri JV22]
          Length = 355

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 176/341 (51%), Gaps = 9/341 (2%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           + R   +N       +  ++     L +E+  +   +S  KE    L D      +  + 
Sbjct: 10  INRFEEINQLLMSSEITSDIKRMTDLSKEQSSIQPIVSKAKEYIKVLEDIEENKLMLDDP 69

Query: 80  DDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +   + +E    L+  K    E  +   +     D  + YLE+ AG GG E+  +   L 
Sbjct: 70  ELGDLAKEELKELETRKPELEEEIKVLMIPKDPNDDRNIYLELRAGTGGDEAAIFVGDLF 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           R Y R+AE   +K E +   D E  G K   +L+KG + Y  LK E G HR+ R+   +S
Sbjct: 130 RAYLRYAENNGWKVEIMSSSDSESGGYKEIVILVKGDHVYSKLKFEGGTHRVQRVPATES 189

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS  ++ V P   D +EIEI+E+D +ID  RASG GGQ VNTTDSAVRITHIP+G
Sbjct: 190 QGRVHTSAITVAVMP-EVDDVEIEINENDLKIDVMRASGNGGQSVNTTDSAVRITHIPSG 248

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSY 315
           +VV  Q ++SQHKNK +A  +L+AKLYE+E++K+ E    G + K ++G G    +IR+Y
Sbjct: 249 IVVTNQDQKSQHKNKDRALKVLKAKLYEIEMEKKME--AEGATRKEQVGTGDRSGRIRTY 306

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
              P   + D R N+       ++ DG   + +   +A  +
Sbjct: 307 NY-PQNRISDHRINLTLYRLDYIMNDGLFGEVIDPLIADHQ 346


>gi|328946334|gb|EGG40478.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1087]
 gi|332361225|gb|EGJ39029.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1056]
          Length = 359

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 99/348 (28%), Positives = 163/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTNRFMELSKEEASTRDTVTAYREYKKVLQNITDAEEM 66

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +       +    QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           Q +A  LL+MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350


>gi|296876522|ref|ZP_06900573.1| peptide chain release factor RF1 [Streptococcus parasanguinis ATCC
           15912]
 gi|296432515|gb|EFH18311.1| peptide chain release factor RF1 [Streptococcus parasanguinis ATCC
           15912]
          Length = 359

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 102/348 (29%), Positives = 164/348 (47%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66

Query: 76  ALEEDDC-----SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E  D         QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKEAGDDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           Q +A  LL+MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D RID Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|226360607|ref|YP_002778385.1| peptide chain release factor 1 [Rhodococcus opacus B4]
 gi|226239092|dbj|BAH49440.1| peptide chain release factor 1 [Rhodococcus opacus B4]
          Length = 359

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 113/346 (32%), Positives = 171/346 (49%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +   + L  +  DP L  +   A+   +    L   ++    ++    D     EL
Sbjct: 10  IDDILAEHAGLEQQLADPALHNDASAARKAGKRFAELAPIMATYTRLKSAQDDLDAAREL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A ++   +      +       +              D +D  LEV +G GG ES  +A+
Sbjct: 70  AADDSSFAAEVPALEEQVLELDKTLTDLL--APRDPHDGDDVVLEVKSGEGGEESALFAS 127

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190
            L RMY R+AE+  ++ E L+    +  G K ATL IK         +  LK E GVHR+
Sbjct: 128 DLARMYVRYAERHGWRVEILDATVSDLGGYKDATLSIKSKGDVRDGVWARLKFEGGVHRV 187

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + +YP  ++  E++I E+D RID YR+SG GGQ VNTTDSAV
Sbjct: 188 QRVPVTESQGRVHTSAAGVLIYPEPEEVEEVQIDETDLRIDVYRSSGKGGQGVNTTDSAV 247

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG+VV CQ ERSQ +NKA+A  +L A+L     +  +  A+ G  S+   +   
Sbjct: 248 RITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQAAAEEAADAEASAGRQSQVRTVDRS 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R   +  +   VLDG+LD  + A     +
Sbjct: 308 ERIRTYNF-PENRITDHRIGFKSHNLDAVLDGELDALLDALGKSDR 352


>gi|229816317|ref|ZP_04446624.1| hypothetical protein COLINT_03367 [Collinsella intestinalis DSM
           13280]
 gi|229808073|gb|EEP43868.1| hypothetical protein COLINT_03367 [Collinsella intestinalis DSM
           13280]
          Length = 355

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 111/341 (32%), Positives = 171/341 (50%), Gaps = 15/341 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +     L  K  DP +  ++ E   L +E  H  + +   +E    L D  +  E+
Sbjct: 5   LEKIIIAFEELEKKLSDPAVASDIKEFTRLNKEYAHQTDLVKAAREYLGALDDIDVAKEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D    +     +   + ++   +       +     D  D  +E+ + AGG E+ 
Sbjct: 65  LHDAVDADEKEMLQMEISENEAKLPQLEEDIKIMLIPGDPMDEKDTIVEIRSAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MY R+ E +K+K   L+    E  G KS    ++G   Y  +K E GVHR+ 
Sbjct: 125 IFAGDLFKMYQRFIESKKWKMTVLDSSPSEAGGFKSIEFKVEGDKVYSVMKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R  TS +++ V P   D I+I+I+++D R+DTY ASG GGQ VNTT SAVR
Sbjct: 185 RVPKTESQGRIQTSTATVAVLP-EADEIDIQINQADLRVDTYCASGPGGQCVNTTYSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---W 308
           ITH+PT  VVQ Q++RSQ +N+     MLRA+LYE+EL+K++    +G     +IG    
Sbjct: 244 ITHLPTNTVVQSQEQRSQIQNREVCMQMLRARLYEMELEKQQAE--LGAERSAQIGHGNR 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNI-EKTSPSDVLDGD-LDDFM 347
             +IR+Y L P   V D R       +   VL GD L D +
Sbjct: 302 SEKIRTYNL-PQDRVTDHRIGFNSTYN--GVLLGDQLSDVI 339


>gi|306823422|ref|ZP_07456797.1| peptide chain release factor RF1 [Bifidobacterium dentium ATCC
           27679]
 gi|309802666|ref|ZP_07696770.1| peptide chain release factor 1 [Bifidobacterium dentium JCVIHMP022]
 gi|304553129|gb|EFM41041.1| peptide chain release factor RF1 [Bifidobacterium dentium ATCC
           27679]
 gi|308220730|gb|EFO77038.1| peptide chain release factor 1 [Bifidobacterium dentium JCVIHMP022]
          Length = 362

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 163/345 (47%), Gaps = 16/345 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +    +  +  +P +  +  + + L R    L   +S     +    D     E+    +
Sbjct: 14  EEYRNIEQQMAEPEVASDPDKMRKLGRRHAELGAIVSAYTAYKQTKDDLEAAKEM--ASE 71

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D    +E       +    E  +   +     D+ D  +E+ AG GG E+  +A  LLRM
Sbjct: 72  DPDFAEEAKRLENELPEFEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAALFAGDLLRM 131

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193
           Y R+AEKR +       +  E  G+K   L I            +  LK E GVHR+ RI
Sbjct: 132 YMRYAEKRGWAVTLQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEGGVHRVQRI 191

Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
              +S  R  TS + + V+P   +D  EI+I   D +ID + +SG GGQ VNTT SAVR+
Sbjct: 192 PVTESQGRIQTSAAGVIVFPEADEDDDEIDIDPKDLKIDIFMSSGPGGQSVNTTYSAVRM 251

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309
           THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++  EE A   +   +++      
Sbjct: 252 THIPTGIVVSMQDEKSQIQNRASALRVLKSRL--LAMKHEEEAAQAADMRHSQVRSLDRS 309

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +IR+Y   P   + D RTN +  +   VLDGDL   + + +   
Sbjct: 310 ERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 353


>gi|119511149|ref|ZP_01630266.1| peptide chain release factor 1 [Nodularia spumigena CCY9414]
 gi|119464137|gb|EAW45057.1| peptide chain release factor 1 [Nodularia spumigena CCY9414]
          Length = 365

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 101/348 (29%), Positives = 174/348 (50%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q    L  +  DP    N  E + + + R  L+  ++  +  +    +     ++
Sbjct: 10  LKSVEQTFHELTRRLADPDTASNPDEYQKIAKSRSSLEEVVNTYETWKIATEELAGARQV 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130
             E +    L E +        E         +   L     D  +  LE+ AG GG E+
Sbjct: 70  LKEANGDPELHEMAALEVNELEEKLEHLEARLKVLLLPRDPNDEKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  LLRMY+R+AE + +K + +    GE  G K   L I+G + Y  LK E GVHR+
Sbjct: 130 SIWAGDLLRMYSRYAELQHWKVKLVSESLGEMGGFKEVILEIQGDSVYSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P   D +EI I   D  + T R+ GAGGQ+VN  ++A 
Sbjct: 190 QRVPATEAGGRVHTSTATVAIMP-EVDDVEIHIDPKDIEMSTARSGGAGGQNVNKVETAA 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +NK +A  +LRAKLYE++L ++++   +    ++++G G 
Sbjct: 249 DLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMKLAEQQD--AVTSMRRSQVGTGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R   +  S + VL+G+L+  +++ ++  +
Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLG-QNYSLNPVLEGELETVIQSCISQDQ 352


>gi|149019616|ref|ZP_01834935.1| peptide chain release factor 1 [Streptococcus pneumoniae SP23-BS72]
 gi|168483091|ref|ZP_02708043.1| peptide chain release factor 1 [Streptococcus pneumoniae
           CDC1873-00]
 gi|147930991|gb|EDK81971.1| peptide chain release factor 1 [Streptococcus pneumoniae SP23-BS72]
 gi|172043551|gb|EDT51597.1| peptide chain release factor 1 [Streptococcus pneumoniae
           CDC1873-00]
 gi|301799986|emb|CBW32576.1| peptide chain release factor 1 [Streptococcus pneumoniae OXC141]
 gi|332200609|gb|EGJ14681.1| peptide chain release factor 1 [Streptococcus pneumoniae GA41317]
          Length = 359

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 160/348 (45%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + +   +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNIVDAEEM 66

Query: 76  ALEEDDCSI-----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E    +       QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEELAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|84503529|ref|ZP_01001580.1| peptide chain release factor 1 [Oceanicola batsensis HTCC2597]
 gi|84388019|gb|EAQ01067.1| peptide chain release factor 1 [Oceanicola batsensis HTCC2597]
          Length = 349

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 176/344 (51%), Gaps = 14/344 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                QR  +L  +  +        +   L RE   L   ++ I   +           L
Sbjct: 7   LAQITQRFEYLEARMAEGG-----GDFAALSREYSELRPVVATIAAWEQAQTALSEAEGL 61

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +  ++  E    L+       +  Q   L    ADS  A +E+  G GG E+  +A
Sbjct: 62  RDDPEMRALADEEIQRLRHDLPELEQALQIALLPKDAADSRPAMIEIRPGTGGDEAALFA 121

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R++E R ++ + +E+++ E  GIK     ++G N +  LK E GVHR+ R+ 
Sbjct: 122 GDLLRMYQRYSEARGWRFQVVELNETELGGIKEVVANVQGENVFARLKFESGVHRVQRVP 181

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++I+I  S+ RIDT RASGAGGQHVNTTDSAVRITH
Sbjct: 182 ETESGGRIHTSAATVAVLP-EAEDVDIQIDPSEIRIDTMRASGAGGQHVNTTDSAVRITH 240

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV    E+SQH+N+A A  +LR +L++LE QK  +          ++G G    +
Sbjct: 241 VPTGIVV-VSSEKSQHQNRAIAMQVLRTRLFDLERQKAADARAADRK--AQVGTGDRSER 297

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       V+ GDLD+ + A  A  +
Sbjct: 298 IRTYNF-PQGRVTDHRINLTLYRLDQVMQGDLDEVIDALTADHQ 340


>gi|33519808|ref|NP_878640.1| peptide chain release factor 1 [Candidatus Blochmannia floridanus]
 gi|81666793|sp|Q7VR74|RF1_BLOFL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33504153|emb|CAD83415.1| peptide chain release factor 1 (RF-1) [Candidatus Blochmannia
           floridanus]
          Length = 358

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 114/334 (34%), Positives = 182/334 (54%), Gaps = 7/334 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           +  QR   L     + +   N      L +E  +L   I + +E  +   + +   ++  
Sbjct: 11  SLKQRFYKLEKSLNNFNTINNKEFY-SLSKEHTYLHEIIKYFEEWLNIQKNIVHTKDMLS 69

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           + D   I+Q+    L   K  +E K    L S   D  + ++E+ AG GG E+  +A  L
Sbjct: 70  DIDMHDIVQDELKILNTSKHNLENKIKILLFSDPQDQYNCFIELRAGTGGKEAAIFAGEL 129

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY+R+ E +++  E +    GE  G K   + +    +YG LK E G HR+ RI   +
Sbjct: 130 FRMYSRYIEMQRWNMEIIHATYGECGGYKEIIIKVPVHGSYGQLKFESGGHRVQRIPNTE 189

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  R HTS  +I V P + ++I  EI+ +D RIDT+R+SGAGGQHVNTTDSA+RITHIP+
Sbjct: 190 SQGRIHTSTCTIAVIPNIPNAILPEINSNDLRIDTFRSSGAGGQHVNTTDSAIRITHIPS 249

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314
           G+ V+CQ ERSQHKNK++A ++L+++LY + ++++++  +     +  IG G    +IR+
Sbjct: 250 GLSVECQDERSQHKNKSKALSVLKSRLYAINIKQKQQEESNV--RRNLIGTGDRSDRIRT 307

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           Y  Q    V D R         D+++G LD  ++
Sbjct: 308 YNFQ-QGRVTDHRIAFTSYKLHDIMNGKLDILIQ 340


>gi|182677881|ref|YP_001832027.1| peptide chain release factor 1 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|238691232|sp|B2IHL7|RF1_BEII9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|182633764|gb|ACB94538.1| peptide chain release factor 1 [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 358

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 112/346 (32%), Positives = 178/346 (51%), Gaps = 18/346 (5%)

Query: 16  WDNAVQRLSFLNTKT-EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
            D  ++R   ++ +  E+P    +      L RE   LD     I+  +D + +   +  
Sbjct: 7   LDLILRRHEEISARLTENP----DAATFVSLSRELAGLDEVAQAIRAYRDEMTEISGMEA 62

Query: 75  L-----ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           +        E      +E  D  QR+    ++ +   L     D   A LE+ AG GG E
Sbjct: 63  MLADPATEPELLALAEEELQDARQRLGAFEQHLRIALLPKDADDEKSAILEIRAGTGGDE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY R+AE + +  E L + +G   G K     I G   +  LK E G HR
Sbjct: 123 AALFAGDLFRMYQRYAEAKGWGVEILSVSEGTAGGYKEIVAEITGKGVFAKLKFESGTHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R HTS +++ V P   + +++EI+E+D +IDT RA GAGGQHVN T+SA
Sbjct: 183 VQRVPDTETQGRIHTSAATVAVLP-QAEEVDVEINEADLKIDTMRAQGAGGQHVNKTESA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +RITH+PTG V+  Q ERSQHKN+A+A ++LR+++Y+ + Q+ E         K ++G G
Sbjct: 242 IRITHLPTGTVIFVQDERSQHKNRARAMSLLRSRIYDAKRQQLEAER--AADRKAQVGSG 299

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
               +IR+Y   P   + D R N+       V+ G+ LD+ + A +
Sbjct: 300 DRSERIRTYNF-PQGRLTDHRINLTLYKLDKVMTGEALDEVIDALI 344


>gi|15902968|ref|NP_358518.1| peptide chain release factor 1 [Streptococcus pneumoniae R6]
 gi|116517153|ref|YP_816384.1| peptide chain release factor 1 [Streptococcus pneumoniae D39]
 gi|148994243|ref|ZP_01823536.1| peptide chain release factor 1 [Streptococcus pneumoniae SP9-BS68]
 gi|148998842|ref|ZP_01826278.1| peptide chain release factor 1 [Streptococcus pneumoniae SP11-BS70]
 gi|149003880|ref|ZP_01828703.1| peptide chain release factor 1 [Streptococcus pneumoniae SP14-BS69]
 gi|149006296|ref|ZP_01830008.1| peptide chain release factor 1 [Streptococcus pneumoniae SP18-BS74]
 gi|149012959|ref|ZP_01833848.1| peptide chain release factor 1 [Streptococcus pneumoniae SP19-BS75]
 gi|168488841|ref|ZP_02713040.1| peptide chain release factor 1 [Streptococcus pneumoniae SP195]
 gi|168491915|ref|ZP_02716058.1| peptide chain release factor 1 [Streptococcus pneumoniae
           CDC0288-04]
 gi|168494449|ref|ZP_02718592.1| peptide chain release factor 1 [Streptococcus pneumoniae
           CDC3059-06]
 gi|168576251|ref|ZP_02722145.1| peptide chain release factor 1 [Streptococcus pneumoniae MLV-016]
 gi|182683968|ref|YP_001835715.1| peptide chain release factor 1 [Streptococcus pneumoniae CGSP14]
 gi|221231773|ref|YP_002510925.1| peptide chain release factor 1 [Streptococcus pneumoniae ATCC
           700669]
 gi|225854521|ref|YP_002736033.1| peptide chain release factor 1 [Streptococcus pneumoniae JJA]
 gi|225856675|ref|YP_002738186.1| peptide chain release factor 1 [Streptococcus pneumoniae P1031]
 gi|225858811|ref|YP_002740321.1| peptide chain release factor 1 [Streptococcus pneumoniae 70585]
 gi|237650077|ref|ZP_04524329.1| peptide chain release factor 1 [Streptococcus pneumoniae CCRI 1974]
 gi|237822154|ref|ZP_04597999.1| peptide chain release factor 1 [Streptococcus pneumoniae CCRI
           1974M2]
 gi|303255576|ref|ZP_07341627.1| peptide chain release factor 1 [Streptococcus pneumoniae BS455]
 gi|303260464|ref|ZP_07346432.1| peptide chain release factor 1 [Streptococcus pneumoniae SP-BS293]
 gi|303262821|ref|ZP_07348758.1| peptide chain release factor 1 [Streptococcus pneumoniae
           SP14-BS292]
 gi|303265291|ref|ZP_07351201.1| peptide chain release factor 1 [Streptococcus pneumoniae BS397]
 gi|303266498|ref|ZP_07352385.1| peptide chain release factor 1 [Streptococcus pneumoniae BS457]
 gi|303268383|ref|ZP_07354179.1| peptide chain release factor 1 [Streptococcus pneumoniae BS458]
 gi|307067803|ref|YP_003876769.1| protein chain release factor A [Streptococcus pneumoniae AP200]
 gi|307127431|ref|YP_003879462.1| peptide chain release factor 1 [Streptococcus pneumoniae 670-6B]
 gi|32171541|sp|Q8DPZ4|RF1_STRR6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|122278730|sp|Q04KR4|RF1_STRP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238691157|sp|B2IPH6|RF1_STRPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790899|sp|C1C6Z5|RF1_STRP7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790900|sp|B8ZPH1|RF1_STRPJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790902|sp|C1CE12|RF1_STRZJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790903|sp|C1CK98|RF1_STRZP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|15458532|gb|AAK99728.1| Peptide chain release factor I [Streptococcus pneumoniae R6]
 gi|116077729|gb|ABJ55449.1| peptide chain release factor 1 [Streptococcus pneumoniae D39]
 gi|147755269|gb|EDK62320.1| peptide chain release factor 1 [Streptococcus pneumoniae SP11-BS70]
 gi|147758110|gb|EDK65114.1| peptide chain release factor 1 [Streptococcus pneumoniae SP14-BS69]
 gi|147762073|gb|EDK69035.1| peptide chain release factor 1 [Streptococcus pneumoniae SP18-BS74]
 gi|147763112|gb|EDK70053.1| peptide chain release factor 1 [Streptococcus pneumoniae SP19-BS75]
 gi|147927384|gb|EDK78415.1| peptide chain release factor 1 [Streptococcus pneumoniae SP9-BS68]
 gi|182629302|gb|ACB90250.1| peptide chain release factor 1 [Streptococcus pneumoniae CGSP14]
 gi|183572574|gb|EDT93102.1| peptide chain release factor 1 [Streptococcus pneumoniae SP195]
 gi|183573754|gb|EDT94282.1| peptide chain release factor 1 [Streptococcus pneumoniae
           CDC0288-04]
 gi|183575581|gb|EDT96109.1| peptide chain release factor 1 [Streptococcus pneumoniae
           CDC3059-06]
 gi|183577929|gb|EDT98457.1| peptide chain release factor 1 [Streptococcus pneumoniae MLV-016]
 gi|220674233|emb|CAR68768.1| peptide chain release factor 1 [Streptococcus pneumoniae ATCC
           700669]
 gi|225720924|gb|ACO16778.1| peptide chain release factor 1 [Streptococcus pneumoniae 70585]
 gi|225723680|gb|ACO19533.1| peptide chain release factor 1 [Streptococcus pneumoniae JJA]
 gi|225724367|gb|ACO20219.1| peptide chain release factor 1 [Streptococcus pneumoniae P1031]
 gi|301794156|emb|CBW36566.1| peptide chain release factor 1 [Streptococcus pneumoniae INV104]
 gi|301801854|emb|CBW34572.1| peptide chain release factor 1 [Streptococcus pneumoniae INV200]
 gi|302597432|gb|EFL64527.1| peptide chain release factor 1 [Streptococcus pneumoniae BS455]
 gi|302636019|gb|EFL66517.1| peptide chain release factor 1 [Streptococcus pneumoniae
           SP14-BS292]
 gi|302638376|gb|EFL68843.1| peptide chain release factor 1 [Streptococcus pneumoniae SP-BS293]
 gi|302642104|gb|EFL72455.1| peptide chain release factor 1 [Streptococcus pneumoniae BS458]
 gi|302643949|gb|EFL74209.1| peptide chain release factor 1 [Streptococcus pneumoniae BS457]
 gi|302645156|gb|EFL75393.1| peptide chain release factor 1 [Streptococcus pneumoniae BS397]
 gi|306409340|gb|ADM84767.1| Protein chain release factor A [Streptococcus pneumoniae AP200]
 gi|306484493|gb|ADM91362.1| peptide chain release factor 1 [Streptococcus pneumoniae 670-6B]
 gi|332073352|gb|EGI83831.1| peptide chain release factor 1 [Streptococcus pneumoniae GA17570]
 gi|332075368|gb|EGI85837.1| peptide chain release factor 1 [Streptococcus pneumoniae GA41301]
 gi|332075634|gb|EGI86102.1| peptide chain release factor 1 [Streptococcus pneumoniae GA17545]
 gi|332202882|gb|EGJ16950.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47901]
          Length = 359

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 160/348 (45%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + +   +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E       +    QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|293363656|ref|ZP_06610406.1| peptide chain release factor 1 [Mycoplasma alligatoris A21JP2]
 gi|292552763|gb|EFF41523.1| peptide chain release factor 1 [Mycoplasma alligatoris A21JP2]
          Length = 354

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 102/341 (29%), Positives = 172/341 (50%), Gaps = 5/341 (1%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLE 74
           +   +   +     +P +  ++ +   L +E   ++  +    +    ++ L +   +L 
Sbjct: 7   SIKSKYEEMQQNLANPDVISDIKKYTKLNKELNSIEEIVVSFNKYLNAEENLKNAKEMLA 66

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
               E       E S+N + +       +   L   E DS +  +E+   AGG E+  +A
Sbjct: 67  EKDSELVELAKIEISENEEIMTKLGAELKILILPKDENDSKNVIVEIRGAAGGDEANIFA 126

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY +W+++   + + L+    E  G    T  + G   Y  LK E GVHR+ RI 
Sbjct: 127 GDLFRMYQKWSDQNDMRLKVLDETRAEAGGFTLITFTVTGEKPYSKLKFESGVHRVQRIP 186

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P +DD IEIE+   D R+D +R+SG GGQ VNTTDSAVR+TH
Sbjct: 187 VTETKGRVHTSTATVTVMPEIDDDIEIEVKPEDIRVDVFRSSGNGGQSVNTTDSAVRLTH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
             TG+VV CQ+ +SQ +NK  A  +L++KLY+LEL+K++E  +             +IR+
Sbjct: 247 NATGIVVSCQEGKSQIQNKEIAMRILKSKLYDLELKKKQEEESGYRKLAGLGFRSEKIRT 306

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           Y   P   V D R +   +  S V++G ++  + + L  ++
Sbjct: 307 YNY-PQDRVTDHRISYSTS-LSPVMEGKVNSIIDSLLTAEQ 345


>gi|319781345|ref|YP_004140821.1| peptide chain release factor 1 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317167233|gb|ADV10771.1| peptide chain release factor 1 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 359

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 116/348 (33%), Positives = 184/348 (52%), Gaps = 18/348 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  V+R   L  +    P           +  E   + + ++ ++ ++    +   L  +
Sbjct: 10  DQVVKRFEMLEAQMSAGPA----PDAYVRMASEYAEIQDMVAKVRALRAAEHEQADLEAM 65

Query: 76  ALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  ++        RI+   +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 66  LADRGTDAEMRALAEAELPGVEDRIEALQKDIQILLLPRDAADDKNAILEIRAGTGGDEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A +R ++ E     DG+  G K     + G   +  LK E GVHR+
Sbjct: 126 ALFAGDLFRMYERYAAERGWRFETASASDGDAGGYKEIIATVSGKGVFAHLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +++ R HTS +++ V P   + ++I+I   D RIDT RASG+GGQHVNTTDSAV
Sbjct: 186 QRVPATEASGRIHTSAATVAVLP-EAEEVDIDIRAEDIRIDTMRASGSGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG++V  Q E+SQH+N+A+A  +LRA+LY+LE  K +E     ES K+++G G 
Sbjct: 245 RITHLPTGIMV-VQAEKSQHQNRAKAMQILRARLYDLERGKADEER--SESRKSQVGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V+ G+LD+ + A +A  +
Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVMMGELDEIINALIADHQ 348


>gi|156742398|ref|YP_001432527.1| peptide chain release factor 1 [Roseiflexus castenholzii DSM 13941]
 gi|156233726|gb|ABU58509.1| peptide chain release factor 1 [Roseiflexus castenholzii DSM 13941]
          Length = 364

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 109/349 (31%), Positives = 168/349 (48%), Gaps = 14/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +   R   L      P +  + +  +   RE++ L+  +   +  +D          L
Sbjct: 9   LASITARYDELLDLMAQPDVATDPVRLQRYAREQRELEPLVEAYRAYRDVERQIEDTSFL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + Q   D L  +       + +           DS +A +E+  G GG E+ 
Sbjct: 69  LEHETDQDVRQLAQDELDHLLERRAQLEQQIKVLLLPRDPNDSKNAIMELRQGEGGDEAA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYTR+AE+R +  E +   +    G K     ++G  AY  LK E GVHR+ 
Sbjct: 129 LFAADLFRMYTRYAEQRGWDIEVISATENGPGGYKEIIFEVRGEGAYSRLKYEGGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P V+++    ++ SD R+D +R+ G GGQ VNTTDSAVR
Sbjct: 189 RVPATEARGRIHTSTATVAVLPEVEETDIE-LNPSDYRVDVFRSGGHGGQGVNTTDSAVR 247

Query: 252 ITHIP---TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           I + P     +VV CQ  RSQ KNKA A  +LRA+LY  E +KR +   +GE+   ++G 
Sbjct: 248 IVYKPGTPEEIVVTCQDSRSQLKNKASALAVLRARLYAREEEKRRKE--LGETRLAQVGA 305

Query: 309 GRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           G +   IR+Y   P   V D R     ++   +LDGDLD  +   +   
Sbjct: 306 GERAEKIRTYNF-PQDRVTDHRIGQNFSNLPGILDGDLDRLIDMLIIAD 353


>gi|77457286|ref|YP_346791.1| peptide chain release factor 2 [Pseudomonas fluorescens Pf0-1]
 gi|77381289|gb|ABA72802.1| putative Peptide chain release factor 2 (RF-2) protein [Pseudomonas
           fluorescens Pf0-1]
          Length = 280

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 154/257 (59%), Positives = 195/257 (75%), Gaps = 1/257 (0%)

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           +  +   +F  + S E D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F    +
Sbjct: 22  EESLSKLEFRRMFSHEMDPNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIM 81

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E+  GE AGIK AT+ IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +
Sbjct: 82  ELSAGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEI 141

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD +EIEI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  
Sbjct: 142 DDKVEIEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDT 201

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A  MLRAKLYE E+QKR   +   E +K++IGWG QIRSYVL     +KDLRTNIE++  
Sbjct: 202 AMKMLRAKLYEQEMQKRNAASQALEDTKSDIGWGHQIRSYVLD-ASRIKDLRTNIERSDC 260

Query: 336 SDVLDGDLDDFMKATLA 352
             VLDGD+D++++A+L 
Sbjct: 261 DKVLDGDIDEYLEASLK 277


>gi|149174661|ref|ZP_01853286.1| peptide chain release factor 1 [Planctomyces maris DSM 8797]
 gi|148846355|gb|EDL60693.1| peptide chain release factor 1 [Planctomyces maris DSM 8797]
          Length = 360

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 112/348 (32%), Positives = 174/348 (50%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               + R   L  + +DP +  N  +   + RE   L      ++E   R  D  +  E+
Sbjct: 6   LQVKLDRYEELEKELQDPEVLANTSKLVEIQREYGGLAKVALAVREFNTRAEDIEVAREM 65

Query: 76  ALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE D +  +          +  +  ++  +   +           +E+ AGAGG E+ 
Sbjct: 66  LEEETDPAAREYAQKELDELCEEHEKHIKELEDLVVAGDSITRGGLIMEIRAGAGGDEAA 125

Query: 132 DWANMLLRMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            +A  L  MY  + E ++ +KTE L +   E  G+K  T  I G  AY  L+ E G HR+
Sbjct: 126 LFARELFDMYMHFVEAQKGWKTEVLNMSATELGGLKEVTFSIAGEGAYHRLQFESGGHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P     +E++I   D R+DT+ ASG GGQ VN T+SAV
Sbjct: 186 QRVPETETQGRVHTSAATVAVLP-EASEVEVDIKPDDIRLDTFHASGPGGQKVNKTESAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH+PTG VVQCQ E+SQHKNKA+A  +LR+++  LE  +++      +  +T IG G 
Sbjct: 245 RITHLPTGTVVQCQDEKSQHKNKAKAMRVLRSRV--LEQMQQKAADERADQRRTLIGSGD 302

Query: 311 ---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       ++ GDL+D + A L   +
Sbjct: 303 RSQRIRTYNF-PQGRVTDHRINLSLYKIDQIMQGDLNDLISALLQFDR 349


>gi|326386588|ref|ZP_08208210.1| peptide chain release factor 1 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208903|gb|EGD59698.1| peptide chain release factor 1 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 356

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 116/346 (33%), Positives = 173/346 (50%), Gaps = 12/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R + L  +     L  +        R+   L+      ++++    +   L  L
Sbjct: 8   LDQIAARFAELEARLASGTL--DAEAFIAASRDYAELEPVAHTARDVRLLRDELASLAAL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFE--SLLSGEADSNDAYLEVHAGAGGTESQDW 133
              + D   L E      R +L    ++     L    ADS+ A LE+ AG GG E+  +
Sbjct: 66  DEPDADMRALAEEEMARIRAELPEAERRLALAMLPRDNADSHPAMLEIRAGTGGDEAALF 125

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMY R+A ++ +K E +  +  +  G K     + G   +  LK E GVHR+ R+
Sbjct: 126 AADLFRMYERYAAEQGWKVEVISANASDIGGFKEVIAHVAGQGVFAKLKYESGVHRVQRV 185

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS +++ V P   D +++ I + D +ID YRASGAGGQHVNTTDSAVRIT
Sbjct: 186 PVTESGGRIHTSAATVAVLP-EPDEVDVSIDDKDLKIDIYRASGAGGQHVNTTDSAVRIT 244

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG+VV  Q ERSQHKNKA+A  +LR +LY+L  ++        E+ +  +G G    
Sbjct: 245 HLPTGIVVTQQDERSQHKNKAKAMQVLRTRLYDLRREQ--AQGAEAEARRAMVGSGDRSE 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIKK 355
           +IR+Y   P   V D R N+      ++L G  L + + A  A  +
Sbjct: 303 RIRTYNF-PQGRVTDHRINLTLHRLPEILAGTGLGELIDALTAEDQ 347


>gi|332523754|ref|ZP_08400006.1| peptide chain release factor 1 [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332315018|gb|EGJ28003.1| peptide chain release factor 1 [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 359

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 96/348 (27%), Positives = 165/348 (47%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +   R   L     DP +  +      L +E  +  + ++  ++ ++ +       E+
Sbjct: 7   LQSLEDRYEELGELLSDPEVVSDTKRFMQLSKEEANTRDTVTTYRQYKEIIQSIADAEEM 66

Query: 76  ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E    + ++E +    +      +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDAEIEEMAKEELKESKAAKENYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLVMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E EI   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEDVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI HIPT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHIPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALIMYDQ 350


>gi|309791603|ref|ZP_07686096.1| peptide chain release factor 1 [Oscillochloris trichoides DG6]
 gi|308226321|gb|EFO80056.1| peptide chain release factor 1 [Oscillochloris trichoides DG6]
          Length = 360

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 112/353 (31%), Positives = 171/353 (48%), Gaps = 15/353 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD   + V R   L      P +  N+   +   RE++ L+  ++  +  Q        
Sbjct: 1   MFDKLQSVVARYDELGELMAQPEVVNNLSLLQQYAREQRELEEVVNAFQAYQRARQAAEE 60

Query: 72  LLELALEEDDCSILQETSDNLQRIK----LEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              +  E  D  + +   + L+  +       E  +   L     D+ D  +E+  G GG
Sbjct: 61  AHTMLNESSDAEMRELAHEELESQRTRIAQLEEEIKLLLLPRDPNDAKDVIIEIRQGEGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  L RMY R+AE R +K E   I D    G K A   I+G NAY  LK E GV
Sbjct: 121 DEAALFAADLYRMYVRYAELRGWKVEVDSITDNGIGGFKEAVFEIRGENAYSQLKYEGGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P V+ ++   I + D R D +R+ G GGQ VNTTD
Sbjct: 181 HRVQRVPATEARGRIHTSTATVAVMPEVEPTVIE-IKDEDVRTDVFRSGGHGGQGVNTTD 239

Query: 248 SAVRITHI---PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           SAVR+ +    P  +VV CQ  RSQ KN+ +A ++LRAKLY  E +K++     G S   
Sbjct: 240 SAVRLVYRGGTPDEIVVTCQDGRSQIKNREKAMSVLRAKLYAREQEKQQ--RAQGASRLA 297

Query: 305 EIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           ++G G +   IR+Y   P   + D R     ++   VL G+LD  + A +   
Sbjct: 298 QVGTGERAEKIRTYNF-PQDRITDHRIGQNFSNLPGVLAGNLDKIIDALIVYD 349


>gi|125717977|ref|YP_001035110.1| peptide chain release factor 1 [Streptococcus sanguinis SK36]
 gi|166223611|sp|A3CN05|RF1_STRSV RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|125497894|gb|ABN44560.1| Protein chain release factor A, putative [Streptococcus sanguinis
           SK36]
 gi|324991176|gb|EGC23110.1| peptide chain release factor RF1 [Streptococcus sanguinis SK353]
 gi|324994440|gb|EGC26353.1| peptide chain release factor RF1 [Streptococcus sanguinis SK678]
          Length = 359

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 99/348 (28%), Positives = 163/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMDLSKEEASTRDTVTAYREYKKVLQNITDAEEM 66

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +       +    QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           Q +A  LL+MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350


>gi|327460378|gb|EGF06715.1| peptide chain release factor RF1 [Streptococcus sanguinis SK1057]
          Length = 359

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 100/348 (28%), Positives = 163/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMDLSKEEASTRDTVTAYREYKKVLQNITDAEEM 66

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +       +    QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           Q +A  LL+MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D RID Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350


>gi|251782311|ref|YP_002996613.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390940|dbj|BAH81399.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|323127208|gb|ADX24505.1| peptide chain release factor 1 [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 359

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 95/348 (27%), Positives = 162/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  +       E+
Sbjct: 7   LQAVEDRYEELGELLSDPEVVSDTKRFMALSKEEASTRDTVTTYREYKQVIQAIADAEEM 66

Query: 76  ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    S L+E +    +      +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDSELEEMAKEELKESKAAKEDYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ + P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLIMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEIIDALVMYDQ 350


>gi|171741092|ref|ZP_02916899.1| hypothetical protein BIFDEN_00158 [Bifidobacterium dentium ATCC
           27678]
 gi|171276706|gb|EDT44367.1| hypothetical protein BIFDEN_00158 [Bifidobacterium dentium ATCC
           27678]
          Length = 362

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 106/345 (30%), Positives = 165/345 (47%), Gaps = 16/345 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +    +  +  +P +  +  + + L R    L   +S     +    D     E+A E+ 
Sbjct: 14  EEYRNIEQQMAEPEVASDPDKMRKLGRRHAELGAIVSAYTAYKQTKDDLEAAKEMASEDP 73

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D +   +  +N      E        +     D+ D  +E+ AG GG E+  +A  LLRM
Sbjct: 74  DFAEEAKRLENELPEIEEKLRTAL--IPRDPDDARDTIMEIKAGTGGEEAALFAGDLLRM 131

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193
           Y R+AEKR +       +  E  G+K   L I            +  LK E GVHR+ RI
Sbjct: 132 YMRYAEKRGWAVTLQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEGGVHRVQRI 191

Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
              +S  R  TS + + V+P   +D  EI+I   D +ID + +SG GGQ VNTT SAVR+
Sbjct: 192 PVTESQGRIQTSAAGVIVFPEADEDDDEIDIDPKDLKIDIFMSSGPGGQSVNTTYSAVRM 251

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309
           THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++  EE A   +   +++      
Sbjct: 252 THIPTGIVVSMQDEKSQIQNRASALRVLKSRL--LAMKHEEEAAQAADMRHSQVRSLDRS 309

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +IR+Y   P   + D RTN +  +   VLDGDL   + + +   
Sbjct: 310 ERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 353


>gi|154246564|ref|YP_001417522.1| peptide chain release factor 1 [Xanthobacter autotrophicus Py2]
 gi|226739122|sp|A7IIM2|RF1_XANP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|154160649|gb|ABS67865.1| peptide chain release factor 1 [Xanthobacter autotrophicus Py2]
          Length = 360

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 120/349 (34%), Positives = 172/349 (49%), Gaps = 16/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R + +              E   L RE   L   +  ++ ++D   D     EL
Sbjct: 9   LDQLVARHAEIEAALSRG---AEGEEYVRLGREFSDLSPVVEQVRALKDAERDLEGANEL 65

Query: 76  ALEEDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E      ++E           RI+      +   L     D     LEV AG GG E+
Sbjct: 66  LAESAADPEMREMAEAEVERLQDRIEALATAVRLALLPKDAMDERGIILEVRAGTGGDEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMYTR+A ++ +  E L   +G   G K     + G  AY  LK E GVHR+
Sbjct: 126 ALFAGDLYRMYTRYAAEKGWSVEILSESEGTMGGYKEIVAALHGRGAYARLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +++ R HTS +++ V P   + ++++I+E+D RID YRA GAGGQHVN T+SAV
Sbjct: 186 QRVPATETSGRIHTSAATVAVLP-EAEDVDVDINEADLRIDVYRAQGAGGQHVNKTESAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PT  VV  Q ERSQH+NKA+A  +LRA+L + E QK+E  A      K ++G G 
Sbjct: 245 RITHLPTNTVVAVQDERSQHRNKARAMALLRARLLDDERQKKE--AGRAAERKGQVGSGD 302

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+      +V+ G  LD+ +   L   +
Sbjct: 303 RSERIRTYNF-PQGRVTDHRINLTLYKLDEVIAGTALDEIIDPLLTEHQ 350


>gi|315638047|ref|ZP_07893232.1| peptide chain release factor RF1 [Campylobacter upsaliensis JV21]
 gi|315481895|gb|EFU72514.1| peptide chain release factor RF1 [Campylobacter upsaliensis JV21]
          Length = 355

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 116/340 (34%), Positives = 185/340 (54%), Gaps = 9/340 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +R   LNT   D  +  ++ +   L +E+++L+  +   K+  + L        L  + +
Sbjct: 11  KRYEELNTLLSDTKIINDIEKMTSLSKEQKNLEPIVLKTKDYFNTLTQIEDNKALLNDPE 70

Query: 81  DCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
              + +E   NL+  K+  E   +   L     D  + +LE+ AG GG E+  +   L++
Sbjct: 71  FSELAKEELKNLEEAKINFEEEIKILLLPKDPNDEKNIFLEIRAGTGGDEASLFVGDLVK 130

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
            Y R+A+ R +K E +   +G   G K   +L+KG  AY  LK E G HR+ RI   +S 
Sbjct: 131 AYARYADLRGYKIEIVSSSEGSAGGFKELIMLVKGTGAYSRLKFESGTHRVQRIPQTESQ 190

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ + P   D IEI+I+ +D +ID  R+SG GGQ VNTTDSAVRITHIP+G+
Sbjct: 191 GRIHTSAITVAIMP-EVDDIEIQINPNDLKIDVMRSSGHGGQSVNTTDSAVRITHIPSGL 249

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316
           VV  Q  +SQHKNK  A  +L+A+LY  E+Q+ E +A   E+ K+++G G    +IR+Y 
Sbjct: 250 VVVNQDGKSQHKNKESAMKILKARLY--EMQESERLAKESEARKSQVGSGDRSERIRTYN 307

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLAIKK 355
             P   + D R N+       +++G L D+ ++  +A  +
Sbjct: 308 F-PQNRISDHRINLTLYRLDAIMEGGLFDELIEPLIAHHQ 346


>gi|225621133|ref|YP_002722391.1| peptide chain release factor 1 [Brachyspira hyodysenteriae WA1]
 gi|254790865|sp|C0QWA1|RF1_BRAHW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|225215953|gb|ACN84687.1| peptide chain release factor 1 [Brachyspira hyodysenteriae WA1]
          Length = 358

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 115/353 (32%), Positives = 183/353 (51%), Gaps = 14/353 (3%)

Query: 12  GLFDWDNAVQR-LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + D  + V++    +  K  D ++ ++    + LM+++  +++ +   K+++  L +  
Sbjct: 2   SIIDKLSLVEKTYEDIVQKLNDANI-KDNRVIQDLMKKKSEIEDIVEEYKKLKVVLKEIE 60

Query: 71  ILLELALEEDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
              E+    D    L++       D  Q+ +  V   +   L   + D  +  +E+  G 
Sbjct: 61  ESNEMVNNPDTDKELKDMALLEIEDLNQKKEDIVNGLRLLLLPKDKNDGKNIIVEIRVGT 120

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG ES  +   L RMYTR+ E+   K E ++    E  G K     + G +AY  LK E 
Sbjct: 121 GGDESALFVGDLFRMYTRFIERTNLKMEIIDTSPTELGGYKEVIFSVSGKDAYRTLKFES 180

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HR+ RI   +S  R HTS S++ V P   +S  + I + D R+D +R+SG GGQ VNT
Sbjct: 181 GTHRVQRIPATESGGRIHTSASTVAVMPEAMESDVV-IKDEDIRVDIFRSSGPGGQSVNT 239

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PTG+VVQCQ E+SQHKNKA+A  +LRA++YE E  +R   A   +  + +
Sbjct: 240 TDSAVRITHLPTGLVVQCQDEKSQHKNKAKALKVLRARIYEKEEAER--KAKEAKERREQ 297

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IG G    +IR+Y   P   V D R N+        +DG++ +   A    ++
Sbjct: 298 IGSGDRSERIRTYNF-PQNRVTDHRINVTLYKLDRFMDGEITEITDALFKKEQ 349


>gi|139439315|ref|ZP_01772757.1| Hypothetical protein COLAER_01773 [Collinsella aerofaciens ATCC
           25986]
 gi|133775339|gb|EBA39159.1| Hypothetical protein COLAER_01773 [Collinsella aerofaciens ATCC
           25986]
          Length = 355

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 112/334 (33%), Positives = 175/334 (52%), Gaps = 12/334 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++    L  K  DP +  ++ E   L +E  H  + I+  +E    L D     E+
Sbjct: 5   LEKIIKAYEELEKKLSDPAVASDIKEFTRLNKEYAHQSDLIAASREYIGALDDIEAAKEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D    +    ++   + ++   +    +  + S   D  +  +E+ + AGG E+ 
Sbjct: 65  LRDTTDADEKEMLQMDISENEEKLPQLEEDIKYMLIPSDPNDDKNTIVEIRSAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MY R+ E R +KT  L+    E  G KS    ++G   Y  +K E GVHR+ 
Sbjct: 125 IFAGDLYKMYQRFCESRGWKTTVLDSSPSEAGGFKSIEFKVEGDRVYSVMKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R  TS +++ V P   + I+++I++SD RIDTY ASG GGQ VNTT SAVR
Sbjct: 185 RVPKTESQGRIQTSTATVAVLP-EAEEIDVQINQSDLRIDTYCASGPGGQCVNTTYSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---W 308
           ITH+PT  VVQ Q++RSQ +N+     MLRA+LYE+EL+K++    +G   +++IG    
Sbjct: 244 ITHLPTNTVVQSQEQRSQIQNREVCMQMLRARLYEMELEKQQAE--LGAERQSQIGHGNR 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             +IR+Y  QP   V D R     T  + VL GD
Sbjct: 302 SEKIRTYN-QPQDRVTDHRIGFNSTY-NGVLLGD 333


>gi|88797976|ref|ZP_01113563.1| peptide chain release factor 2 [Reinekea sp. MED297]
 gi|88779173|gb|EAR10361.1| peptide chain release factor 2 [Reinekea sp. MED297]
          Length = 280

 Score =  208 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 159/279 (56%), Positives = 210/279 (75%), Gaps = 1/279 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A+EEDD   + + S+ L  ++ ++E  +F  + SGE D ++AYL++ AG+GGTE+QDWA
Sbjct: 1   MAVEEDDEGSVADVSEELAGLQRQLEELEFRRMFSGEMDPSNAYLDIQAGSGGTEAQDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            MLLRMY RW E++ FKTE +E   G+ AGIKSAT+  +G  A+GWL+ E GVHRLVR S
Sbjct: 61  EMLLRMYLRWGEEKGFKTELMEASAGDVAGIKSATVRFEGEYAFGWLRTETGVHRLVRKS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DS +RRHTSFSS++V P +DD++EIEI+ +D RID YRASGAGGQHVN T+SAVRITH
Sbjct: 121 PFDSGNRRHTSFSSVFVSPEIDDNVEIEINPADLRIDVYRASGAGGQHVNRTESAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
            PTG+V QCQ +RSQHKNK QA   L+AKLYE E+ +R+E A + E +K++IGWG QIRS
Sbjct: 181 EPTGIVTQCQNDRSQHKNKDQAMKQLKAKLYEREMLQRQEAAQLVEDNKSDIGWGSQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           YVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 241 YVLDD-ARIKDLRTGVENRNTQAVLDGALDPFIEASLKQ 278


>gi|85705322|ref|ZP_01036421.1| peptide chain release factor 1 [Roseovarius sp. 217]
 gi|85670195|gb|EAQ25057.1| peptide chain release factor 1 [Roseovarius sp. 217]
          Length = 426

 Score =  208 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 109/341 (31%), Positives = 172/341 (50%), Gaps = 14/341 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +R  F+  +        ++     L RE   L   +  I+  +  L D      +
Sbjct: 85  LQQIAERFEFIEAQMMQGG--GDIAR---LGREYSELRPLVEEIRAYRQILADIEGARAM 139

Query: 76  ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +       E      R+       Q   L   EA++  A LE+  G GG E+  +A
Sbjct: 140 LGDPEMRDLARDELEVLEARLPGMEAALQLALLPRDEANARPAILEIRPGTGGEEAALFA 199

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L+RMY R+AE R +  + +E    E  GI+   + IKG   +  LK E GVHR+ R+ 
Sbjct: 200 ADLMRMYQRYAEARGWVFDVIEEQQSELGGIRELVVHIKGEGVFARLKFESGVHRVQRVP 259

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++++I+ +D RIDT R+SGAGGQHVNTTDSAVRITH
Sbjct: 260 ETESGGRIHTSAATVAVLP-EAEDVDVQINPNDLRIDTMRSSGAGGQHVNTTDSAVRITH 318

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IP+G+VV    E+SQH+N+  A  +L+++L+++E  + +       +   ++G G    +
Sbjct: 319 IPSGIVVTSS-EKSQHRNREIAMQVLKSRLFDMERSRVDSER--SANRAAQVGSGDRSER 375

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       V+ GDLD+ + A  A
Sbjct: 376 IRTYNF-PQGRMTDHRINLTLYKLEQVMGGDLDEVIDALTA 415


>gi|319899228|ref|YP_004159321.1| peptide chain release factor 1 [Bartonella clarridgeiae 73]
 gi|319403192|emb|CBI76751.1| peptide chain release factor 1 [Bartonella clarridgeiae 73]
          Length = 357

 Score =  208 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 118/348 (33%), Positives = 180/348 (51%), Gaps = 18/348 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               +R   + ++  + P    N      L  E   L   I  I+ +     +   L  +
Sbjct: 10  KQLEKRFETIESQMAENP----NAETYVKLASEYAELQPIIVLIRALNSLCKEIAELETI 65

Query: 76  ALEEDDCSILQETSDN-----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  +        Q+++   +  Q   L    AD     +E+ AG GG+E+
Sbjct: 66  ISDTQTDTEMRNLAQEELSSLYQKVQQLEQELQILLLPKDIADEKSVIIEIRAGTGGSEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A    +K E + + DGE  G K     I G   +  LK E GVHR+
Sbjct: 126 ALFAGNLFRMYERYANTHNWKVEVISLSDGEVGGYKEIIATISGKGVFSKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            RI   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 186 QRIPETETGGRIHTSAATVAVLP-EAEEIDIEIRPEDIRIDTMRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+L+++E QK    +    S KT++G G 
Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQK--AESERSASRKTQVGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       +++GDL++ + A ++  +
Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRIMEGDLNELINALISDHQ 348


>gi|225436757|ref|XP_002269884.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|296086617|emb|CBI32252.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score =  208 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 110/350 (31%), Positives = 186/350 (53%), Gaps = 17/350 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++A +    L+ K  DP +  N  E + L +    LD  +S  K  +D          L
Sbjct: 53  LESAEKTWKELSVKLADPDIVSNPSEYQKLAQSMAELDEVVSTFKRFKDCEKQLEEAKAL 112

Query: 76  ALEEDDCSILQETS-----DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           A E+   + + E           ++K   E  +   L S   DS +  LEV AG GG E+
Sbjct: 113 AKEDGIDADMAEMIAYEIGTLTNQLKELEENIKVLLLPSDPLDSRNILLEVRAGTGGDEA 172

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY +++E+  +K   +   + E+ G K+  L +KG   Y  LK E GVHR+
Sbjct: 173 GIWAGDLVRMYQKYSERNSWKYAPVSSSEAEKGGFKTYVLEVKGNCVYSKLKYESGVHRV 232

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P   D +E+ I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 233 QRVPQTETQGRVHTSTATVAIMP-EADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAV 291

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ER+Q +N+++A  +LRAKLYE+++++++E+  I    K+++G G 
Sbjct: 292 DLFHKPTGIRIFCTEERTQLQNRSRALQLLRAKLYEIKVREQQEL--IRNQRKSQVGTGA 349

Query: 310 --RQIRSYVLQPYQMVKDLR--TNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R   N E T     LDGD++  +++ +A+++
Sbjct: 350 RAEKIRTYNYKD-NRVTDHRLKMNFELT---SFLDGDIETAVQSCVAMEQ 395


>gi|281425822|ref|ZP_06256735.1| peptide chain release factor 1 [Prevotella oris F0302]
 gi|281400083|gb|EFB30914.1| peptide chain release factor 1 [Prevotella oris F0302]
          Length = 370

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 90/359 (25%), Positives = 158/359 (44%), Gaps = 20/359 (5%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +  D    R   ++T   DP +  +      L +E + L + ++  K     L    
Sbjct: 6   SILEKLDGLESRFEEVSTLITDPDVIADQTRYVKLTKEWKDLGDIMNARKRYIACLDSIR 65

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAG 126
              ++   E D  +     + LQ+ +      +       +     D+ +  +E+ AG G
Sbjct: 66  EAKDILANESDSDMKDMAREELQQNETLQPQLEEEIKLLLIPKEPEDAKNVQMEIRAGTG 125

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L  MY R+ + + +     ++ +G   G K     I G + YG +K E G
Sbjct: 126 GDEAALFAGDLFNMYKRFCDMKGWTLSVTDVSEGAVGGYKEIDFAISGTDVYGTMKYESG 185

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +SN R  TS +++ V P  D      I+E D + DT+R+SGAGGQ+VN  
Sbjct: 186 VHRVQRVPVTESNGRMQTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKV 244

Query: 247 DSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           +S VR+ +            ++++C + R Q KNK +A + L   +++ E QK   + +I
Sbjct: 245 ESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTFIHDREHQKY--VDDI 302

Query: 299 GESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               K+ +  G +   IR+Y   P   V D R           L G++ D + A    +
Sbjct: 303 ASRRKSLVSTGDRSAKIRTYNF-PQGRVTDHRIGYTTHDLQGFLGGNIQDMIDALTVAE 360


>gi|254438684|ref|ZP_05052178.1| peptide chain release factor 1 [Octadecabacter antarcticus 307]
 gi|198254130|gb|EDY78444.1| peptide chain release factor 1 [Octadecabacter antarcticus 307]
          Length = 344

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 111/338 (32%), Positives = 169/338 (50%), Gaps = 12/338 (3%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              +R  FL  +  +  L  +      + RE   L   +  ++  QD   +      +  
Sbjct: 2   QITERFEFLEARMGE-GLGGD--AFVSVSREYAELRPVVEVVRHYQDLTEEIEGAQAMLS 58

Query: 78  EEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           + +   + +     L+          +   +    AD   A LE+  G GG E+  +A  
Sbjct: 59  DPEMKELAEMELPQLRERLPDAEAAVKLALIPKDAADGKPALLEIRPGTGGDEAALFAGD 118

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           LLRMY R+AE R +  E LE    E  GIK  T  I G N +  +K E GVHR+ R+   
Sbjct: 119 LLRMYQRYAESRGWTFEILEESQSELGGIKEVTARIAGNNVFARMKYESGVHRVQRVPET 178

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS +++ V P   + ++I+I+ +D RIDT RASG+GGQHVNTTDSAVRITH+P
Sbjct: 179 ESGGRIHTSAATVAVLP-EAEDVDIQINANDIRIDTMRASGSGGQHVNTTDSAVRITHMP 237

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           +G+VV    E+SQH+N+  A  +L+ +LY+ E QK  +          ++G G    +IR
Sbjct: 238 SGIVVTSS-EKSQHRNREIAMQVLKTRLYDAERQKVHDER--SADRAAQVGSGDRSERIR 294

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +Y   P   + D R N+       +L GDLD+ +   +
Sbjct: 295 TYNF-PQGRMTDHRINLTLYKLDAILQGDLDEVIDGLI 331


>gi|312865182|ref|ZP_07725410.1| peptide chain release factor 1 [Streptococcus downei F0415]
 gi|311099293|gb|EFQ57509.1| peptide chain release factor 1 [Streptococcus downei F0415]
          Length = 359

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 99/348 (28%), Positives = 161/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE       ++  +E +  L       E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMQLSREEASSRETVTVYREYKQILQAISDAEEM 66

Query: 76  ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E      L+E +    +      +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKEAGGDPELEEMAKEELKDSKIAKEDYEEKMKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLNMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVLYDQ 350


>gi|240849863|ref|YP_002971251.1| peptide chain release factor 1 [Bartonella grahamii as4aup]
 gi|240266986|gb|ACS50574.1| peptide chain release factor 1 [Bartonella grahamii as4aup]
          Length = 358

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 182/347 (52%), Gaps = 18/347 (5%)

Query: 18  NAVQRLSFLNTKTE-DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   +  +   +P    N      L  E   L   I+ I+ +     +   L  + 
Sbjct: 11  QLEKRFEIIERQMTTNP----NAETYVKLASEYAELQPVIASIRALNALYKEITELETII 66

Query: 77  LEEDDCSILQETSDN-----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            ++     ++  +        ++++   +  Q   L    AD  +A +E+ AG GG+E+ 
Sbjct: 67  NDKQTDVEMRNLAQEELPLLYKKVEQFEKELQILLLPKDVADEKNAIVEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY R+A    +K E + + +GE  G K     I G   +  LK E GVHR+ 
Sbjct: 127 LFSGDLFRMYERYAHAHHWKVEVISLSEGEVGGYKEIIATISGKGVFSKLKYESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   ++  R HTS +++ V P   + I+I+I   D RIDT RASGAGGQHVNTTDSAVR
Sbjct: 187 RIPETETGGRIHTSAATVAVLP-EAEEIDIDIRPEDIRIDTMRASGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG++V  Q E+SQH+N+A+A  +LRA+L+++E QK    +    S K+++G G  
Sbjct: 246 ITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQK--AESERSASRKSQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R N+       +L+GDLD+ + A ++  +
Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLYKLDRILEGDLDELLHALISDHQ 348


>gi|210634612|ref|ZP_03298189.1| hypothetical protein COLSTE_02111 [Collinsella stercoris DSM 13279]
 gi|210158740|gb|EEA89711.1| hypothetical protein COLSTE_02111 [Collinsella stercoris DSM 13279]
          Length = 355

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 113/341 (33%), Positives = 171/341 (50%), Gaps = 13/341 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +     L  K  DP +  ++ E   L +E  H  + +   +E    L D     E+
Sbjct: 5   LEKIIIAFEELEKKLSDPSIASDIKEFTRLNKEYAHQTDLVKAAREYLGALDDIEAAKEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E  D    +     +   + ++   +       +     D  D  +E+ + AGG E+ 
Sbjct: 65  LREATDADEKEMLQMEISENEAKLPQLEEDIKIMLIPGDPMDEKDTIVEIRSAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MY R+ E +K+K E L+    +  G KS    + G   Y  +K E GVHR+ 
Sbjct: 125 IFAGDLFKMYQRFIESKKWKMEVLDSSPSDAGGFKSIEFKVTGDRVYSVMKYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R  TS +++ V P   D I+++I++SD RIDTY ASG GGQ VNTT SAVR
Sbjct: 185 RVPKTESQGRIQTSTATVAVLP-EADEIDVQINQSDLRIDTYCASGPGGQCVNTTYSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---W 308
           ITH+PT  VVQ Q++RSQ +N+     MLRA+LYE+EL+K++    +G     +IG    
Sbjct: 244 ITHLPTNTVVQSQEQRSQIQNREVCMQMLRARLYEMELEKQQAE--LGAERSAQIGHGNR 301

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMK 348
             +IR+Y  QP   V D R     T  + VL GD L   ++
Sbjct: 302 SEKIRTYN-QPQDRVTDHRIGFNSTY-NGVLLGDQLSSVIE 340


>gi|87124992|ref|ZP_01080839.1| peptide chain release factor [Synechococcus sp. RS9917]
 gi|86167312|gb|EAQ68572.1| peptide chain release factor [Synechococcus sp. RS9917]
          Length = 365

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 102/348 (29%), Positives = 163/348 (46%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + A      L  +  DP +  +    + + RER  L+  +     +Q    +      L
Sbjct: 10  LEAASTSFRNLERQLADPDVAADPKRLETIARERSRLEPLVQDFASLQQVESERDQAKAL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE-----YKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E  +   +QE +                      L +   D     LE+ AGAGG E+
Sbjct: 70  LRESREDPAMQELAQQELDQLEVRRSALLEQLTLALLPTDPRDGRSVMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+  ++ +  + +  +  +  G +   L +KG   +  LK E GVHR+
Sbjct: 130 CLWAGDLARMYERYGTRQHWTVQPVSANAADLGGYRELILSVKGEAVFSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +E++I  ++  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADPVEVQIDPTELEISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C QERSQ +N+ +A  +LRAKLY  E Q  E  A    + + ++G G 
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERALEILRAKLY--ERQLAEANARESSARRAQVGTGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R          VL+G LD+ + A +A ++
Sbjct: 307 RSEKIRTYNAKD-NRVTDHRLGRNFG-LDPVLEGQLDEVIGACIAEEQ 352


>gi|293399752|ref|ZP_06643898.1| peptide chain release factor 1 [Erysipelotrichaceae bacterium
           5_2_54FAA]
 gi|291306152|gb|EFE47395.1| peptide chain release factor 1 [Erysipelotrichaceae bacterium
           5_2_54FAA]
          Length = 358

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 107/346 (30%), Positives = 174/346 (50%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V R   +      P +  +  E   L RE+  L   +   ++ +  +       EL
Sbjct: 8   LEGMVNRYHEITELMMQPDIVSDSRELAKLGREQADLTQVVETYQDYKHSMEALEEAKEL 67

Query: 76  ALEEDDC---SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             EED         E  +   +I+  +   +   +     DS++A +E+   AGG E   
Sbjct: 68  LKEEDKEIKEMAKMEIEELEPKIEEYLGKLEILLIPKDPNDSHNAIVEIRGAAGGDEGNI 127

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AE + +K E +E+ D E  G    + ++KG   YG LK E G HR+ R
Sbjct: 128 FAGDLYRMYSKYAESQGWKIEIVEMDDSEAGGFSLVSFMVKGDGVYGKLKFESGSHRVQR 187

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P   ++ + +I  +D  I+T R+SGAGGQH+N TDSAVRI
Sbjct: 188 VPKTESQGRIHTSTATVLVTP-EIEAEDFDIDMNDLEIETMRSSGAGGQHINKTDSAVRI 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
            H PTG+ V+CQ  RSQH+N+A A   +R+++YE   +K EE   +    +++IG G   
Sbjct: 247 VHKPTGITVKCQDGRSQHENRATALMTIRSRVYEEHQRKLEEEQGM--ERRSKIGTGDRA 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R          +++G + D + A  +  +
Sbjct: 305 EKIRTYNY-PQNRVTDHRIGYTVNQLDRIMEGKMQDLLDALTSADQ 349


>gi|289643112|ref|ZP_06475242.1| peptide chain release factor 1 [Frankia symbiont of Datisca
           glomerata]
 gi|289507076|gb|EFD28045.1| peptide chain release factor 1 [Frankia symbiont of Datisca
           glomerata]
          Length = 356

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 112/345 (32%), Positives = 175/345 (50%), Gaps = 10/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L ++  DP +  +   A+ L R    L  A+   +E+     D     E 
Sbjct: 5   LDALLTEHAELESRLADPSVHADPALARSLGRRYAELTPAVETARELDRVAADLATAREF 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E+          +  Q             + +   D+ DA LE+ AGAGG ES  +A 
Sbjct: 65  AAEDTSFRAEVAELEAEQETLRNRLRAHL--VPTDPDDARDAILEIKAGAGGEESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL-----LIKGPNAYGWLKGEQGVHRL 190
            LLRMY R+AE+R ++TE L+ +  +  G +  ++            +G L+ E GVHR+
Sbjct: 123 DLLRMYLRYAERRGWRTEILDANPSDLGGYRDVSVAVKAGRGASEGVFGRLRFEGGVHRV 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + V P     +E++I  +D RID YR+SG GGQ VNTTDSAV
Sbjct: 183 QRVPVTESAGRIHTSAAGVLVLP-EAADVEVDIDPNDLRIDVYRSSGPGGQSVNTTDSAV 241

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+P+G+VV CQ E+SQ +NK  A  +LRA+L  +  ++ +  A+   +S+   +   
Sbjct: 242 RITHLPSGLVVSCQNEKSQLQNKESALRILRARLLSVARERAQAEASAARASQVRTVDRS 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            ++R+Y       + D R   +  +   VLDG+LDD + A +A  
Sbjct: 302 ERVRTYNFA-ENRISDHRVGYKAYNLDQVLDGELDDVLNALIAAD 345


>gi|260592403|ref|ZP_05857861.1| peptide chain release factor 1 [Prevotella veroralis F0319]
 gi|260535639|gb|EEX18256.1| peptide chain release factor 1 [Prevotella veroralis F0319]
          Length = 370

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 92/354 (25%), Positives = 157/354 (44%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   ++T   DP +  +      L +E + L + +   K     L       ++
Sbjct: 11  LDGLEARYEEVSTLITDPSVIADQSRYVKLTKEYKDLGDIMDARKRYITCLTTIKEAKDI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L   +      +       +     D+ +  +E+  GAGG E+ 
Sbjct: 71  IANESDAEMKEMAREELAENEELQPRLEEEIKILLVPKDPEDAKNVQMEIRGGAGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY R+ +K+ +K     + +G   G K     ++G N YG LK E GVHR+ 
Sbjct: 131 LFAGDLFNMYKRYCDKKGWKLSITSVSEGAVGGFKEIDFAVEGENVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P  D      I+E D + DT+R+SGAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRMHTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKVESGVR 249

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +            ++++C + R Q KNK +A + L   +Y+ E QK   I +I    K
Sbjct: 250 LRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTYIYDHEHQKY--IDDIASRRK 307

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T +  G +   IR+Y   P   V D R           ++G++ + + A    +
Sbjct: 308 TLVSTGDRSAKIRTYNF-PQGRVTDHRIGFTTHDLQGFMNGEIQEMIDALTVAE 360


>gi|33519726|ref|NP_878558.1| peptide chain release factor 2 [Candidatus Blochmannia floridanus]
 gi|33504071|emb|CAD83332.1| peptide chain release factor 2 (RF-2) [Candidatus Blochmannia
           floridanus]
          Length = 365

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 147/343 (42%), Positives = 213/343 (62%), Gaps = 2/343 (0%)

Query: 10  LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           L  +FD +   + L  +  K +   +W ++        +    +N    +  +   L D 
Sbjct: 17  LRIVFDCNVQKELLKKIIVKLKSVDIWSSLSHNMTADGQCNSFENIGELVNYMVKDLQDL 76

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             L+++ +  D   I +     +   ++ +   +   + S + D  + Y+++ +G+GGTE
Sbjct: 77  SDLIKIVVHNDSLLINEIQEQLIHIDRI-LFQLEMCQMFSKKYDDCNCYVDIQSGSGGTE 135

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +QDWANMLLRMY +W + + F  E +    G+ +GIKS T+ + GP  YGWL+ E G+HR
Sbjct: 136 AQDWANMLLRMYLKWIDNKGFNVEIVTESCGDFSGIKSTTIKVIGPYVYGWLRTESGIHR 195

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           LVR SP+D+  +RHTSF+S++VYP +DD+I+I+I   D RID YRASGAGGQHVN T+SA
Sbjct: 196 LVRKSPFDATGKRHTSFASVFVYPELDDNIDIQIRPEDLRIDVYRASGAGGQHVNRTESA 255

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPT +V QCQ +RSQHKNK QA   L+AKLY  EL K+     I E+ K +I WG
Sbjct: 256 VRITHIPTNIVTQCQSDRSQHKNKNQAIKQLKAKLYNFELHKKRIEKKIRENKKKDITWG 315

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            QIRSYVL  +  +KDLRT +EK +   VL+GDLDDF+K ++ 
Sbjct: 316 NQIRSYVLD-HSRIKDLRTGLEKHNVKAVLNGDLDDFIKTSIK 357


>gi|307327906|ref|ZP_07607088.1| peptide chain release factor 1 [Streptomyces violaceusniger Tu
           4113]
 gi|306886424|gb|EFN17428.1| peptide chain release factor 1 [Streptomyces violaceusniger Tu
           4113]
          Length = 359

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 116/350 (33%), Positives = 180/350 (51%), Gaps = 16/350 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +  +   + L  +  DP +  +  EA+ L +    L   I+  +  +    D   
Sbjct: 1   MFEAVEELIGEHADLEKRLADPAVHADQREARRLNKRYAELTPVIAAYRAWKQAGEDIET 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EL   +DD   ++E  +  Q  +   +  +   +    +D  D  LEV AG GG ES 
Sbjct: 61  AREL--AQDDPDFVEEAKELEQSREGLTDRLRLLLVPRDPSDDKDIILEVKAGEGGEESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG----------PNAYGWL 181
            +A  LLRMY R+AE+  +KTE L+ ++ +  G K   + +K              +  L
Sbjct: 119 LFAGDLLRMYLRYAERVGWKTEILDANESDLGGYKDVQVAVKTKGGNGATEPGQGVWARL 178

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   +S  R HTS + + V P   + +E+EI  +D RID YR+SG GGQ
Sbjct: 179 KYEGGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEVEVEIGPNDLRIDVYRSSGPGGQ 237

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITH+PTG+VV CQ E+SQ +NK QA  +LR++L     ++ E  A+    
Sbjct: 238 SVNTTDSAVRITHLPTGIVVSCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREASDARR 297

Query: 302 SKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           S+   +    +IR+Y   P   + D R   +  +   VLDG+L+  ++A 
Sbjct: 298 SQVRTVDRSERIRTYNY-PENRISDHRVGFKAYNLDQVLDGELEPVIQAC 346


>gi|302346475|ref|YP_003814773.1| peptide chain release factor 1 [Prevotella melaninogenica ATCC
           25845]
 gi|302150829|gb|ADK97090.1| peptide chain release factor 1 [Prevotella melaninogenica ATCC
           25845]
          Length = 370

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 91/354 (25%), Positives = 158/354 (44%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   ++T   DP +  +      L +E + L + +   +   + L       ++
Sbjct: 11  LDGLEARYEEVSTLITDPSVIADQSRYVKLTKEYKDLGDIMDARRRYINCLTTIKEAKDI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L   +      +       +     D+ +  +E+  GAGG E+ 
Sbjct: 71  IANESDAEMKEMAREELSENEALQPALEEEIKLLLVPKDPEDAKNVQMEIRGGAGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY R+ +K+ +K     + +G   G K     ++G N YG LK E GVHR+ 
Sbjct: 131 LFAGDLFNMYKRYCDKKGWKLSITSVSEGTAGGFKEIDFAVEGDNVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P  D      I+E D + DT+R+SGAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRMHTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKVESGVR 249

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +            ++++C + R Q KNK +A + L   +Y+ E QK   + +I    K
Sbjct: 250 LRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTYIYDHEHQKY--VDDIASRRK 307

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T +  G +   IR+Y   P   V D R           ++G++ D + A    +
Sbjct: 308 TLVSTGDRSAKIRTYNY-PQGRVTDHRIGFTTHDLQGFMNGEIQDMIDALTVAE 360


>gi|229818480|ref|ZP_04448761.1| hypothetical protein BIFANG_03788 [Bifidobacterium angulatum DSM
           20098]
 gi|229784350|gb|EEP20464.1| hypothetical protein BIFANG_03788 [Bifidobacterium angulatum DSM
           20098]
          Length = 362

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 106/349 (30%), Positives = 169/349 (48%), Gaps = 16/349 (4%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
             A++    L  +   P +  +  + + L R    L + ++  K       D     E+A
Sbjct: 10  QAALKEYQSLEEQMASPEVVTDPNKMRKLGRRHAELGSIVTAYKAYLAVKNDLEAAREMA 69

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
            E+ D +   +  ++      E        +     D+ D  +E+ AG GG E+  +A  
Sbjct: 70  SEDPDFAAEAKRLESELPDVEEKLRTAL--IPRDPDDARDTIMEIKAGTGGEEAALFAGD 127

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHR 189
           LLRMYTR+AEKR +       +  E  G+K   + I            +  LK E GVHR
Sbjct: 128 LLRMYTRYAEKRGWTVSVQSENTTELGGVKDVQVAIRAKGTPAPEDGVWASLKYEGGVHR 187

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           + R+   +S  R  TS + + V+P   DD+ EI+I   D +ID + +SG GGQ VNTT S
Sbjct: 188 VQRVPVTESQGRIQTSAAGVIVFPEADDDNDEIDIDPKDLKIDIFMSSGPGGQSVNTTYS 247

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI-- 306
           AVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++  +E A   +   +++  
Sbjct: 248 AVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRS 305

Query: 307 -GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                +IR+Y   P   + D RTN +  +   VLDGDL   + + +   
Sbjct: 306 LDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 353


>gi|76788237|ref|YP_329784.1| peptide chain release factor 1 [Streptococcus agalactiae A909]
 gi|77405475|ref|ZP_00782567.1| peptide chain release factor 1 [Streptococcus agalactiae H36B]
 gi|119361618|sp|Q3K119|RF1_STRA1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|76563294|gb|ABA45878.1| peptide chain release factor 1 [Streptococcus agalactiae A909]
 gi|77175872|gb|EAO78649.1| peptide chain release factor 1 [Streptococcus agalactiae H36B]
          Length = 359

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 97/348 (27%), Positives = 165/348 (47%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  + +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQNISDAEEM 66

Query: 76  ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + L+E +    +      +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDAELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E EI + D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYEIDQKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ +G G 
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQ 350


>gi|120434841|ref|YP_860527.1| peptide chain release factor 1 [Gramella forsetii KT0803]
 gi|166223562|sp|A0LYL5|RF1_GRAFK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|117576991|emb|CAL65460.1| peptide chain release factor 1 [Gramella forsetii KT0803]
          Length = 358

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 98/346 (28%), Positives = 164/346 (47%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   QR   +N     P +  +      L +E + L   +   ++      +     E+
Sbjct: 5   LNIVKQRFDEVNDLIIQPDVISDQKRYIELNKEYKDLRALMDEREKYISITDNIQEAEEI 64

Query: 76  ALEEDDCSILQETSDNLQRIK----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  + +     L   K       +  +   +     D  +  +E+ AG GG E+ 
Sbjct: 65  ISDGSDPEMTEMAKLQLDEAKGQLPALEDKIRMMLIPKDPEDGKNIVMEIRAGTGGDEAS 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYT++ E R +    ++  +G   G K     + G + YG +K E GVHR+ 
Sbjct: 125 IFAGDLYRMYTKYVEGRGWSHNIVDFSEGTSGGFKEMIFEVSGDDVYGTMKFEAGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P  ++     I   + RID + +SG GGQ VNTT SAVR
Sbjct: 185 RVPQTETQGRVHTSAATVMVLPEAEEFDVE-IDPKEVRIDYFCSSGPGGQSVNTTYSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +TH PTG+V QCQ ++SQHKNK +A+ +LR++LYE+EL K+ E         + +  G +
Sbjct: 244 LTHEPTGLVAQCQDQKSQHKNKEKAFRVLRSRLYEMELAKKME--ADAAKRNSMVSSGDR 301

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              IR+Y       V D R N+     S++++GD+   +      +
Sbjct: 302 SAKIRTYNYA-QSRVTDHRINLTLYDLSNIINGDIQKIIDELQLAE 346


>gi|15675118|ref|NP_269292.1| peptide chain release factor 1 [Streptococcus pyogenes M1 GAS]
 gi|20139346|sp|Q99ZP5|RF1_STRP1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|13622277|gb|AAK34013.1| putative peptide chain release factor 1 [Streptococcus pyogenes M1
           GAS]
          Length = 359

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 96/348 (27%), Positives = 162/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  +       E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSREETNTRETVTAYREYKQVIQTISDAEEM 66

Query: 76  ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +      L+E +    +      +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ +G G 
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQ 350


>gi|332290785|ref|YP_004429394.1| peptide chain release factor 1 [Krokinobacter diaphorus 4H-3-7-5]
 gi|332168871|gb|AEE18126.1| peptide chain release factor 1 [Krokinobacter diaphorus 4H-3-7-5]
          Length = 359

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 95/343 (27%), Positives = 166/343 (48%), Gaps = 12/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRLCDNLIL 72
                QR   ++     P +  +      L +E   L           E+ + L +   +
Sbjct: 5   LQIVKQRFDEISDLIIQPDIITDQKRYVQLNKEYSDLKALMEVREVYIELSENLKEAEEI 64

Query: 73  LELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +    + +   + +   +  +       E  +   +     D+ +  +E+ AG GG E+ 
Sbjct: 65  IADGSDAEMVEMAKMQYEEAKTGIPELEEKIRMMLIPKDPEDAKNVVVEIRAGTGGDEAS 124

Query: 132 DWANMLLRMYTRWAEKR-KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            +A  L RMYT++ +    +K   ++  +G   G K     I G + YG +K E GVHR+
Sbjct: 125 IFAGDLYRMYTKYVDSVPGWKHSTVDYSEGTSGGFKEIQFEITGQDVYGTMKFEAGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P  ++     I   D R+D + +SG GGQ VNTT SAV
Sbjct: 185 QRVPQTETQGRVHTSAATVMVLPEAEEFDVQ-IEPKDVRVDFFCSSGPGGQSVNTTYSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+THIPTG+V QCQ ++SQHKNK +A+ +LR++LY++EL K++E         +++  G 
Sbjct: 244 RLTHIPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDMELAKKQEE--DAAKRNSQVSSGD 301

Query: 311 Q---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +   IR+Y   P   V D R  +      ++++GD+   ++  
Sbjct: 302 RSAKIRTYNY-PQGRVTDHRIGLTLYDLQNIVNGDIQKILEEL 343


>gi|288802476|ref|ZP_06407915.1| peptide chain release factor 1 [Prevotella melaninogenica D18]
 gi|288335004|gb|EFC73440.1| peptide chain release factor 1 [Prevotella melaninogenica D18]
          Length = 370

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 91/354 (25%), Positives = 159/354 (44%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   ++T   DP +  +      L +E + L + +   +   + L       ++
Sbjct: 11  LDGLEARYEEVSTLITDPSVIADQSRYVKLTKEYKDLGDIMDARRRYINCLTTIKEAKDI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E+D  + +   + L   +      +       +     D+ +  +E+  GAGG E+ 
Sbjct: 71  ITNENDAEMKEMAREELSENEALQPALEEEIKLLLVPKDPEDAKNVQMEIRGGAGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY R+ +K+ +K     + +G   G K     ++G N YG LK E GVHR+ 
Sbjct: 131 LFAGDLFNMYKRYCDKKDWKLSITSVSEGTAGGFKEIDFAVEGDNVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P  D      I+E D + DT+R+SGAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRMHTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKVESGVR 249

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +            ++++C + R Q KNK +A + L   +Y+ E QK   + +I    K
Sbjct: 250 LRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTYIYDHEHQKY--VDDIASRRK 307

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T +  G +   IR+Y   P   V D R           ++G++ D + A    +
Sbjct: 308 TLVSTGDRSAKIRTYNY-PQGRVTDHRIGFTTHDLQGFMNGEIQDMIDALTVAE 360


>gi|322373126|ref|ZP_08047662.1| peptide chain release factor 1 [Streptococcus sp. C150]
 gi|321278168|gb|EFX55237.1| peptide chain release factor 1 [Streptococcus sp. C150]
          Length = 359

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 163/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  + +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPEVVSDTKRFMELSREEANTRETVTVYREYKQVIQNITDAEEM 66

Query: 76  ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E      L+E +    +      +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKEASGDPDLEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLNMYQKYAETQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + ++ EI   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVDYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ +G G 
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350


>gi|239917332|ref|YP_002956890.1| bacterial peptide chain release factor 1 (bRF-1) [Micrococcus
           luteus NCTC 2665]
 gi|281414188|ref|ZP_06245930.1| bacterial peptide chain release factor 1 (bRF-1) [Micrococcus
           luteus NCTC 2665]
 gi|239838539|gb|ACS30336.1| bacterial peptide chain release factor 1 (bRF-1) [Micrococcus
           luteus NCTC 2665]
          Length = 369

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 108/358 (30%), Positives = 170/358 (47%), Gaps = 17/358 (4%)

Query: 13  LFD-------WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           +FD        D  +     L  +  DP + Q+   A+ L R    L   ++  +     
Sbjct: 1   MFDSEQRREAVDRLLAEHRELTARLSDPAVHQDPALARRLNRRFAELGAVVTAHRAWSAA 60

Query: 66  LCDNLILLELALEEDDCSILQETSD--NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             +     ELA   DD +                  E  +   +     D+ D  LE+  
Sbjct: 61  AEELADARELAAAGDDDAAAFAAEVPGLEAAEAEAAERLRRLLIPRDPDDARDVILEIKG 120

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI------KGPNA 177
           G GG E+  +A  LLRMY R+A+ R +KTE L     +  G K   + +           
Sbjct: 121 GEGGEEAALFAGDLLRMYLRYADSRGWKTEVLSATHSDLGGYKDVHVAVRGSAADPADGV 180

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           Y  LK E GVHR+ R+   +S  R HTS + + V P VD   E+ +  +D ++D +R+SG
Sbjct: 181 YARLKFEGGVHRVQRVPVTESQGRIHTSAAGVLVLPEVDAPDEVHLDPNDLKVDVFRSSG 240

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQ VNTTDSAVR+TH+PTG+VV  Q E+SQ +N+  A  +LR++L E +  +++   +
Sbjct: 241 PGGQSVNTTDSAVRLTHLPTGIVVSMQNEKSQIQNREAALRVLRSRLLERQRAEQDAEDS 300

Query: 298 IGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +++   +    +IR+Y   P   + D RT  +  +   VLDGDL+  + + LA+ 
Sbjct: 301 AARAAQVRTMDRSERIRTYNF-PENRIADHRTGYKAHNLDAVLDGDLEAVIASCLALD 357


>gi|94988610|ref|YP_596711.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS9429]
 gi|94990486|ref|YP_598586.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS10270]
 gi|94992434|ref|YP_600533.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS2096]
 gi|94994408|ref|YP_602506.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS10750]
 gi|139473768|ref|YP_001128484.1| peptide chain release factor 1 [Streptococcus pyogenes str.
           Manfredo]
 gi|119361619|sp|Q1JBR9|RF1_STRPB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361620|sp|Q1JLQ2|RF1_STRPC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361621|sp|Q1JGV2|RF1_STRPD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361622|sp|Q1J6M1|RF1_STRPF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223610|sp|A2REH9|RF1_STRPG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|94542118|gb|ABF32167.1| bacterial peptide chain release factor 1 (RF-1) [Streptococcus
           pyogenes MGAS9429]
 gi|94543994|gb|ABF34042.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Streptococcus
           pyogenes MGAS10270]
 gi|94545942|gb|ABF35989.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Streptococcus
           pyogenes MGAS2096]
 gi|94547916|gb|ABF37962.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Streptococcus
           pyogenes MGAS10750]
 gi|134272015|emb|CAM30254.1| peptide chain release factor 1 [Streptococcus pyogenes str.
           Manfredo]
          Length = 359

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 96/348 (27%), Positives = 163/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  +       E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQTISDAEEM 66

Query: 76  ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +      L+E +    +      +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I + D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDQKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ +G G 
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQ 350


>gi|325281736|ref|YP_004254278.1| Peptide chain release factor 1 [Odoribacter splanchnicus DSM 20712]
 gi|324313545|gb|ADY34098.1| Peptide chain release factor 1 [Odoribacter splanchnicus DSM 20712]
          Length = 368

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 91/350 (26%), Positives = 165/350 (47%), Gaps = 19/350 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   +     DP + Q++     L +E + L+       + +  L       ++
Sbjct: 9   LETYYIRFKEIGQLITDPEVIQDMERYVRLTKEYKELETITRTADKFKAALLSVEESKDI 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L E+D  + +     ++ ++ ++   +       + +   DS +  LE+  G GG E+ 
Sbjct: 69  LLHEEDKELREMAEMEIEELEDKLPGMEQELKLLLVPADPDDSKNVILEIRGGTGGDEAC 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E++ +K E    ++G   G K     + G   YG +K E GVHR+ 
Sbjct: 129 LFAGDLFRMYAKFCERKGWKVEVTNANEGTAGGYKEIVASVTGKGVYGIMKYESGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P  +      I+E   + DT+R+ GAGGQ+VN  +S VR
Sbjct: 189 RVPATETQGRVHTSAATVAVLPEAEAFEVE-INEGAIKWDTFRSGGAGGQNVNKVESGVR 247

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + ++           ++++C + R Q KNK +A + LR  +Y+ E QK   I +I    K
Sbjct: 248 LRYVWQNPNTGVAEEILIECTETRDQPKNKERALSRLRTFIYDKEHQKY--IDDISAKRK 305

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           T +  G +   IR+Y   P   V D R N    +   V+DG++D+ ++  
Sbjct: 306 TMVSTGDRSAKIRTYNY-PQGRVTDHRINFTLYNLQAVMDGEIDEIIEKL 354


>gi|295394649|ref|ZP_06804868.1| peptide chain release factor RF1 [Brevibacterium mcbrellneri ATCC
           49030]
 gi|294972542|gb|EFG48398.1| peptide chain release factor RF1 [Brevibacterium mcbrellneri ATCC
           49030]
          Length = 359

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 120/335 (35%), Positives = 180/335 (53%), Gaps = 6/335 (1%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           + +     +  +  +P +  N   A+ L R    LD      +E+   L D     ELA 
Sbjct: 14  SLLDEHERIEAELANPDVHANAGLARKLTRRYSELDQIAKTYRELNQCLSDVEDAKELAS 73

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           E+   +   ++ +    I++  +  +   +     D+ DA +EV AG GG ES  +A  L
Sbjct: 74  EDPAFAEEAKSLEER--IEVLQDKLRELLIPKDPDDARDAIIEVKAGEGGDESALFAGDL 131

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN--AYGWLKGEQGVHRLVRISP 195
           +RMY RWA+ R + TE L+  +    G K  T+ IK      YGWLK E GVHR+ R+  
Sbjct: 132 VRMYQRWADHRGWSTEVLDSTEANLGGYKDITIAIKSREGGVYGWLKFEGGVHRVQRVPV 191

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS + + V+P VD+  EI++ ++D +ID YR+SG GGQ VNTTDSAVRITH+
Sbjct: 192 TESQGRIHTSAAGVLVFPEVDEPEEIQLDDNDLKIDVYRSSGPGGQSVNTTDSAVRITHL 251

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRS 314
           PTG+V  CQ E+SQ +NK  A  MLRA++   + ++    AN    S+   +    +IR+
Sbjct: 252 PTGIVASCQNEKSQLQNKEAAMRMLRARILAKQAEEAAAEANDMRRSQVRTVDRSERIRT 311

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           Y   P   + D RT  +  +   VLDG LDD +++
Sbjct: 312 YNF-PENRIVDHRTGFKAYNLDQVLDGRLDDVVES 345


>gi|299140684|ref|ZP_07033822.1| peptide chain release factor 1 [Prevotella oris C735]
 gi|298577650|gb|EFI49518.1| peptide chain release factor 1 [Prevotella oris C735]
          Length = 370

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 90/359 (25%), Positives = 158/359 (44%), Gaps = 20/359 (5%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            + +  D    R   ++T   DP +  +      L +E + L + ++  K     L    
Sbjct: 6   SILEKLDGLESRFEEVSTLITDPDVIADQTRYVKLTKEWKDLGDIMNARKRYIACLDSIR 65

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAG 126
              ++   E D  +     + LQ+ +      +       +     D+ +  +E+ AG G
Sbjct: 66  EAKDILANESDSDMKDMAREELQQNETLQPQLEEEIKLLLIPKDPEDAKNVQMEIRAGTG 125

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L  MY R+ + + +     ++ +G   G K     I G + YG +K E G
Sbjct: 126 GDEAALFAGDLFNMYKRFCDMKGWTLSVTDVSEGAVGGYKEIDFAISGTDVYGTMKYESG 185

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +SN R  TS +++ V P  D      I+E D + DT+R+SGAGGQ+VN  
Sbjct: 186 VHRVQRVPVTESNGRMQTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKV 244

Query: 247 DSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           +S VR+ +            ++++C + R Q KNK +A + L   +++ E QK   + +I
Sbjct: 245 ESGVRLRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTFIHDREHQKY--VDDI 302

Query: 299 GESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               K+ +  G +   IR+Y   P   V D R           L G++ D + A    +
Sbjct: 303 ANRRKSLVSTGDRSAKIRTYNF-PQGRVTDHRIGYTTHDLQGFLGGNIQDMIDALTVAE 360


>gi|23335569|ref|ZP_00120804.1| COG0216: Protein chain release factor A [Bifidobacterium longum
           DJO10A]
 gi|189440751|ref|YP_001955832.1| peptide chain release factor 1 [Bifidobacterium longum DJO10A]
 gi|238692046|sp|B3DR51|RF1_BIFLD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189429186|gb|ACD99334.1| Protein chain release factor A [Bifidobacterium longum DJO10A]
          Length = 362

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 103/345 (29%), Positives = 163/345 (47%), Gaps = 16/345 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +    +  +   P +  N  + + L R    L   +   K       D     E+A E+ 
Sbjct: 14  EEYQSIEEQMASPEVVSNPDKLRKLGRRHAELGAIVDAYKAWLQVKDDLAAAQEMAGEDA 73

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D +   +  ++      E        +     D+ D  +E+ AG GG E+  +A  LLRM
Sbjct: 74  DFAEEAKRLEDELPGVEEKLRTAL--IPRDPDDARDTIMEIKAGTGGEEAALFAGDLLRM 131

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193
           YTR+AEKR +       +  E  G+K   + I            +  +K E GVHR+ RI
Sbjct: 132 YTRYAEKRGWSVNVQSENTTELGGVKDVQIAIRAKGTPAPEDGVWASMKYEGGVHRVQRI 191

Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
              +S  R  TS + + V+P   +D  EIEI   D +ID + +SG GGQ VNTT SAVR+
Sbjct: 192 PVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRM 251

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309
           TH+PTG+ V  Q E+SQ +N+A A  +L+++L  L ++  +E A   +   +++      
Sbjct: 252 THLPTGITVNMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLDRS 309

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +IR+Y   P   + D RTN +  +   VLDGDL   + + +   
Sbjct: 310 ERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 353


>gi|298292694|ref|YP_003694633.1| peptide chain release factor 1 [Starkeya novella DSM 506]
 gi|296929205|gb|ADH90014.1| peptide chain release factor 1 [Starkeya novella DSM 506]
          Length = 365

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 116/345 (33%), Positives = 169/345 (48%), Gaps = 18/345 (5%)

Query: 16  WDNAVQRLSFLNTKTE-DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
            D  + R + +      +P    +      L RE   L      +K ++           
Sbjct: 9   LDQLLARHAEIEHALSANP----DAETYVRLSREFAELSPLTDSVKALRSAERQLTDART 64

Query: 75  LALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           LA E      +   ++       ++++      +   L     D     LEV AG GG E
Sbjct: 65  LAAEAAGDKEMAALAEEEVASLEEQVETLTHAVRLALLPKDAMDERGVILEVRAGTGGDE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY R+A    +  E L + +G   G K     + G  AY  LK E GVHR
Sbjct: 125 AALFAGDLFRMYERFAGLNGWSVEVLSLTEGTAGGFKEIVAALHGSGAYAKLKFESGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   + + R HTS +++ V P   + ++I I+ESD RID +RASGAGGQHVN T+SA
Sbjct: 185 VQRVPETEGSGRIHTSAATVAVLP-EVEDVDIAINESDLRIDVFRASGAGGQHVNKTESA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITH+PTG VV  Q ERSQHKNKA+A  MLRA++YE E +KR+  +      K ++G G
Sbjct: 244 VRITHLPTGTVVAVQDERSQHKNKARAMGMLRARIYEAEREKRD--SARASERKVQVGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
               +IR+Y   P   V D R  +      ++L G+ L + + A 
Sbjct: 302 DRSERIRTYNF-PQGRVTDHRIGLTLHKLPEILSGEGLGELVDAL 345


>gi|22537235|ref|NP_688086.1| peptide chain release factor 1 [Streptococcus agalactiae 2603V/R]
 gi|32171547|sp|Q8DZM4|RF1_STRA5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|22534102|gb|AAM99958.1|AE014241_9 peptide chain release factor 1 [Streptococcus agalactiae 2603V/R]
          Length = 359

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 97/348 (27%), Positives = 164/348 (47%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE       ++  +E +  + +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSREEASTRETVTAYREYKQVIQNISDAEEM 66

Query: 76  ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + L+E +    +      +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDAELEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E EI + D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYEIDQKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ +G G 
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQ 350


>gi|163793919|ref|ZP_02187893.1| Protein chain release factor A [alpha proteobacterium BAL199]
 gi|159181030|gb|EDP65547.1| Protein chain release factor A [alpha proteobacterium BAL199]
          Length = 356

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 121/347 (34%), Positives = 180/347 (51%), Gaps = 14/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPH-LWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLI 71
            D  + R   L  +   P        + + L +E   L   +     ++  +  L D   
Sbjct: 7   LDRVLTRALELEARLASPDGFV--QSDFQRLSKELAELTPVVETVGLLRRTRAELADAQA 64

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L E +  E      +E +    ++           L   EAD+ +A LEV AG GG E+ 
Sbjct: 65  LAEESDGEMRELAEEEAAAIEAKLPDLERAMMLHLLPRDEADARNAILEVRAGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY R+A+ R ++ E +E+ + E  G K A   I G + +  LK E GVHR+ 
Sbjct: 125 LFAADLFAMYQRYAQGRGWRFEVMEVSENEIGGYKEAIATISGQSVFAHLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P   + +++ I + D RID YR+SGAGGQHVNTTDSAVR
Sbjct: 185 RVPATESQGRIHTSAATVAVLP-EAEEVDVAIDDKDLRIDVYRSSGAGGQHVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTGVVV  Q E+SQHKN+A+A  +LRA+L++ E  +R+         K++IG G  
Sbjct: 244 ITHLPTGVVVTQQDEKSQHKNRAKAMKILRARLFDQERTRRDSER--AADRKSQIGSGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354
             +IR+Y   P   V D R N+       V+ G+ LD+ + A +A  
Sbjct: 302 SERIRTYNF-PQGRVTDHRINLTLYKIDKVMSGEALDEIVDALIAED 347


>gi|15900891|ref|NP_345495.1| peptide chain release factor 1 [Streptococcus pneumoniae TIGR4]
 gi|111658249|ref|ZP_01408941.1| hypothetical protein SpneT_02000563 [Streptococcus pneumoniae
           TIGR4]
 gi|20139341|sp|Q97R20|RF1_STRPN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|14972493|gb|AAK75135.1| peptide chain release factor 1 [Streptococcus pneumoniae TIGR4]
          Length = 359

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 160/348 (45%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + +   +E +  L + +   E+
Sbjct: 7   LQVVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNIVDAEEM 66

Query: 76  ALEEDDCSI-----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E    +       QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEELAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|302542528|ref|ZP_07294870.1| peptide chain release factor 1 [Streptomyces hygroscopicus ATCC
           53653]
 gi|302460146|gb|EFL23239.1| peptide chain release factor 1 [Streptomyces himastatinicus ATCC
           53653]
          Length = 356

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 177/347 (51%), Gaps = 13/347 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  ++ +   + L  +  DP +  +  EAK L +    L   I   ++ +    D   
Sbjct: 1   MFEAVEDLIGEHAALEKRLADPAVHADQREAKRLNKRYAELTPIIDTYRDWKQTGDDIET 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EL   +DD     E  +   R     +  +   +    +D  D  LEV AG GG ES 
Sbjct: 61  AQEL--AQDDPDFADEVKELELRRAELTDRLRLLLVPRDPSDDKDVILEVKAGEGGEESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGE 184
            +A  LLRMY R+AE+  +KTE ++ ++ +  G K   + +        G   +  LK E
Sbjct: 119 LFAGDLLRMYLRYAERIGWKTEIIDANESDLGGYKDVQVAVKAKGTIEPGQGVWARLKYE 178

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS + + V P   + +E+EI  +D RID YR+SG GGQ VN
Sbjct: 179 GGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEVEVEIGPNDLRIDVYRSSGPGGQSVN 237

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRITH+PTG+VV CQ E+SQ +NK QA  +LR++L     ++ E  A+    S+ 
Sbjct: 238 TTDSAVRITHLPTGIVVSCQNEKSQLQNKEQALRILRSRLLAAAQEEAEREASDARRSQV 297

Query: 305 E-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +    +IR+Y   P   + D R   +  +   VLDG+L   ++A 
Sbjct: 298 RTVDRSERIRTYNF-PENRISDHRVGFKAYNLDQVLDGELAPVIQAC 343


>gi|227535953|ref|ZP_03966002.1| peptide chain release factor RF2 [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|300771659|ref|ZP_07081534.1| peptide chain release factor RF2 [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|227244196|gb|EEI94211.1| peptide chain release factor RF2 [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|300761648|gb|EFK58469.1| peptide chain release factor RF2 [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 283

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 136/264 (51%), Positives = 194/264 (73%)

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
               Q    ++E  +F+++LS E D  DA L++ AGAGGTES DWA ML+RMY  W EK 
Sbjct: 16  ESQYQTALQDIEELEFKNMLSAEEDQLDAILQITAGAGGTESCDWAAMLMRMYIMWGEKH 75

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
             K    +  +G+ AGIK+ TL   G  AYG+LKGE GVHRLVRISP+DSN++RHTSF+S
Sbjct: 76  GCKVTEQDSQEGDVAGIKTVTLQFSGNFAYGYLKGENGVHRLVRISPFDSNAKRHTSFAS 135

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           ++VYP++DD+IEI++ +S+   DT+R+ GAGGQ+VN  ++AVR+ H PTG++++ Q+ RS
Sbjct: 136 VYVYPLIDDNIEIDVKDSEIEWDTFRSGGAGGQNVNKVETAVRLHHKPTGIIIKNQETRS 195

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q +NK  A  +L+++LYE+E++KR+E   + E SK +I WG QIR+YVL PY++VKDLRT
Sbjct: 196 QLQNKENALRLLKSQLYEIEMRKRQEATAVIEGSKKKIEWGSQIRNYVLHPYKLVKDLRT 255

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
           ++E ++   VLDGD+D F+KA L 
Sbjct: 256 SVETSNTQAVLDGDIDMFLKAYLM 279


>gi|21672454|ref|NP_660521.1| peptide chain release factor 1 [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25009047|sp|Q8K9X0|RF1_BUCAP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|21623068|gb|AAM67732.1| peptide chain release factor 1 [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 361

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 113/342 (33%), Positives = 170/342 (49%), Gaps = 8/342 (2%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            +F+   +   R   +           N  + K L +E   +   +    + +    D  
Sbjct: 4   SIFNKLKSLRNRYEEIEIMLSQKDTISNQEKFKNLSKEYLQISEIVKNFIKWEKLETDIK 63

Query: 71  ILLELALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
            +  L  + +   I QE      ++ K   E  +   L     D +  ++E+ A  GG E
Sbjct: 64  NINLLFNDVEMHDIAQEELFIVKKQKKKLEEKIKILLLPVDPNDQHSCFIEIRAATGGDE 123

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           S  +A  L RMYTR+AE   +KTE +   + E  G K     + G  A G LK E G HR
Sbjct: 124 SSIFAGELFRMYTRYAENYMWKTEIMSSSENERGGFKEIIAKVTGKGACGRLKFESGGHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS  ++ + PV   + + EI  SD +IDT+R+SGAGGQHVNTTDSA
Sbjct: 184 VQRVPETESQGRIHTSTCTVAIMPVRPKTKKEEIKVSDLKIDTFRSSGAGGQHVNTTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +RITHIP+G VV+CQ ERSQHKNKA+A ++L A++Y  +L K ++        +  +G G
Sbjct: 244 IRITHIPSGNVVECQDERSQHKNKAKALSILSARVYADKLAKSQKEN--SSMRRILLGTG 301

Query: 310 R---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
               + R+Y       + D R N+     ++VL G LD  + 
Sbjct: 302 ERSDRNRTYNFA-QNRITDHRINLTIYKLNEVLQGKLDLLID 342


>gi|116671165|ref|YP_832098.1| peptide chain release factor 1 [Arthrobacter sp. FB24]
 gi|166223528|sp|A0JY78|RF1_ARTS2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116611274|gb|ABK03998.1| bacterial peptide chain release factor 1 (bRF-1) [Arthrobacter sp.
           FB24]
          Length = 357

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 103/352 (29%), Positives = 175/352 (49%), Gaps = 15/352 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+     +   + +  +  DP ++ +   A+ L R    L+  +      +    D   
Sbjct: 1   MFESVQGLLDEHAAIQAQLGDPAVYADQKLARKLGRRSAQLNGIVEAYHRWESIRDDLAA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E+   ++D     E  +    ++      +   +     D+ +  LEV  G GG E+ 
Sbjct: 61  AKEM--ADEDPEFAAEVPELEASLETAAAKLRRLLIPRDPDDARNVILEVKGGEGGDEAA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI------KGPNAYGWLKGEQ 185
            +A  LLRMY+R+AE R +KTE +   + +  G K   + +           Y  LK E 
Sbjct: 119 LFAADLLRMYSRYAESRGWKTELISATESDLGGYKDVQMAVKGNSNDPAEGVYARLKFEG 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS + + V P VD+  E+EI+++D +ID YR+SG GGQ VNT
Sbjct: 179 GVHRVQRVPVTESQGRIHTSAAGVLVLPEVDEPEELEINQNDLKIDVYRSSGPGGQSVNT 238

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PTG+VV  Q E+SQ +N+     +LRA++   + ++ +         K++
Sbjct: 239 TDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARILAHQQEQIDAEN--SAQRKSQ 296

Query: 306 I---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           I       +IR+Y   P   + D RT  +  +   V++GDL+  +++ + + 
Sbjct: 297 IRTMDRSERIRTYNY-PENRIADHRTGYKAYNLDQVMNGDLEPVIQSAIEMD 347


>gi|328944392|ref|ZP_08241854.1| peptide chain release factor RF1 [Atopobium vaginae DSM 15829]
 gi|327490976|gb|EGF22753.1| peptide chain release factor RF1 [Atopobium vaginae DSM 15829]
          Length = 354

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 111/334 (33%), Positives = 163/334 (48%), Gaps = 13/334 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + L  K  DP +  +  E   + +E     + ++  +E    L D     E+
Sbjct: 5   LEKLIAAYAELEKKMIDPAIVADPKEYARIAKEHARQGDLVARAREYLQALDDIEAAKEM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEV---EYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         D     +      +  +   +     D  D  +E+ AG GG E+  
Sbjct: 65  LHDADADEREMLQEDIAANEEKLPALEDEIKIMLIPGDPNDEKDTIVEIRAGVGGDEAAI 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L +MY R+AE + +K E L     E  G K+    + G   Y  +K E GVHR+ R
Sbjct: 125 FAGDLYKMYERFAESKNWKVEILSSSPSEVGGFKTIEFKMLGEKVYSVMKYESGVHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R  TS +++ V P   D I+I+I  +D RIDTY ASG GGQ VNTT SAVRI
Sbjct: 185 VPKTESQGRIQTSTATVAVLP-EADEIDIQIDPTDLRIDTYCASGPGGQCVNTTYSAVRI 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WG 309
           TH+PT  VVQ Q +RSQ +N+     MLRA+LYE+EL+K++E    G +  ++IG     
Sbjct: 244 THLPTNTVVQSQDQRSQIQNREVCMQMLRARLYEMELEKQQEEQ--GAARLSQIGHGNRS 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIE-KTSPSDVLDGD 342
            +IR+Y  QP   V D R       +   VL GD
Sbjct: 302 EKIRTYN-QPQDRVTDHRIGFNATYN--GVLLGD 332


>gi|294786650|ref|ZP_06751904.1| peptide chain release factor 1 [Parascardovia denticolens F0305]
 gi|315226253|ref|ZP_07868041.1| peptide chain release factor RF1 [Parascardovia denticolens DSM
           10105]
 gi|294485483|gb|EFG33117.1| peptide chain release factor 1 [Parascardovia denticolens F0305]
 gi|315120385|gb|EFT83517.1| peptide chain release factor RF1 [Parascardovia denticolens DSM
           10105]
          Length = 366

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 165/345 (47%), Gaps = 16/345 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
                +  +   P +  +  + + L R    L   +S  +  +    D     E A E++
Sbjct: 15  DEYHEIERQMSQPEVASDPDKIRKLGRRHAELGQIVSAYESYRQIRDDLEAAQEFASEDE 74

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
             +   +  +         E  +   +     D+ D  +E+ AGAGG E+  +A  LLRM
Sbjct: 75  SFAQEAQRLEADLP--EAAEKLRTALIPRDPDDARDTIMEIKAGAGGEEAALFAGDLLRM 132

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193
           YTR+AEKR + TE +  +  E  G+K   +              +  LK E GVHR+ RI
Sbjct: 133 YTRYAEKRSWSTEIMSQNMTELGGVKDIQIAFRSKGVVAPADGVWASLKYEGGVHRVQRI 192

Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
              +S  R  TS + + V+P   DD  EIE+   D +ID + +SG GGQ VNTT SAVR+
Sbjct: 193 PVTESQGRIQTSAAGVIVFPEADDDDDEIEVDPKDLKIDIFMSSGPGGQSVNTTYSAVRM 252

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309
           THIPTG+VV  Q E+SQ +N+  A  +L+++L  L ++  EE     +   +++      
Sbjct: 253 THIPTGIVVSMQDEKSQIQNRQAALRVLKSRL--LAMKHEEEAQEAADMRHSQVRSLDRS 310

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +IR+Y   P   + D RTN +  +   VLDGDL   + + +   
Sbjct: 311 ERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIKAD 354


>gi|206890892|ref|YP_002247867.1| peptide chain release factor 2 [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206742830|gb|ACI21887.1| peptide chain release factor 2 [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 287

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 140/264 (53%), Positives = 196/264 (74%)

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            + ++ IK ++E+ + + LL GE D N+A + +H GAGGTESQDWA +L+RMY RWAEK+
Sbjct: 18  EEEVENIKSQIEHLEIKLLLKGEHDKNNAIVSIHPGAGGTESQDWAEILMRMYLRWAEKK 77

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK E +++  GEEAGIK  T  ++G  AYG+LK E GVHRLVR+SP+D+N RRHTSF++
Sbjct: 78  GFKVEIVDLQLGEEAGIKDVTFTVEGQYAYGYLKCESGVHRLVRVSPFDANKRRHTSFAA 137

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P ++D+I++EI + D R+DT+RASGAGGQHVN   SAVRI HIPTG++V CQ ERS
Sbjct: 138 VSVLPEIEDNIQVEIKDEDIRVDTFRASGAGGQHVNKVSSAVRIVHIPTGIIVTCQTERS 197

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QH+N+  A  +LR+K+Y L  +++E+       +K EI WG QIRSY+L PY+++KD RT
Sbjct: 198 QHRNREIAMKILRSKIYALLQKEQEDKIKSITGNKKEIAWGSQIRSYILHPYRLIKDHRT 257

Query: 329 NIEKTSPSDVLDGDLDDFMKATLA 352
           +IE  +  DVLDG++D F++  L 
Sbjct: 258 DIEVYNVEDVLDGNIDIFIETYLK 281


>gi|88855314|ref|ZP_01129978.1| peptide chain release factor 1 [marine actinobacterium PHSC20C1]
 gi|88815221|gb|EAR25079.1| peptide chain release factor 1 [marine actinobacterium PHSC20C1]
          Length = 359

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 110/352 (31%), Positives = 173/352 (49%), Gaps = 15/352 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+   + +     L  +  DP L  + + +K + R    L   ++     +    D   
Sbjct: 1   MFESVQSLLTEHGELEGQLADPELHSDPVRSKKVNRRYAELSRIVAAYNNWRQLTDDLAA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E+A E++  +              E   +    +     DS D  +E+  G GG ES 
Sbjct: 61  ATEMADEDESFAAEIPGLTETLDTAQEKLRRIL--IPRDPNDSRDVIMEIKMGEGGAESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI------KGPNAYGWLKGEQ 185
            +A  LLRMY  +AE +K+KTE +E    +  GIK   L +           +  LK E 
Sbjct: 119 LFAGDLLRMYLHYAESKKWKTEIIEQTSSDLGGIKDVQLAVKGNSSDPAEGVWAHLKYEG 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS + + V+P VD+  E+EIS++D +ID YR+SG GGQ VNT
Sbjct: 179 GVHRVQRVPATESQGRIHTSAAGVLVFPEVDEPEEVEISQNDLKIDVYRSSGPGGQSVNT 238

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PTG+VV  Q E+SQ +N+     +LRA++  L   + E  A   E  K++
Sbjct: 239 TDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARI--LARYQEEADAEASEYRKSQ 296

Query: 306 I---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           I       +IR+Y   P   + D RT  +  +    ++G L+  +++ +   
Sbjct: 297 IRTMDRSERIRTYNF-PENRIADHRTGYKAYNLDQAINGALEPVIQSCIMAD 347


>gi|288922982|ref|ZP_06417139.1| peptide chain release factor 1 [Frankia sp. EUN1f]
 gi|288345658|gb|EFC80030.1| peptide chain release factor 1 [Frankia sp. EUN1f]
          Length = 356

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 113/348 (32%), Positives = 171/348 (49%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + +   + +  +  DP +  +   A+ L R    L   +     ++    D     EL
Sbjct: 5   LASMIAEHADIEKRLADPAIHNDPSVARELSRRYAELATPVDLALRLESVEGDLEAAREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A ++          ++ +             + +   DS DA LEV AGAGG ES  +A 
Sbjct: 65  AEQDASFRDEITALEDSRAELASRLRAYL--VPTDPDDSRDAILEVKAGAGGEESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-------AYGWLKGEQGVH 188
            LLRMY R+AE+R ++TE L+ +  +  G +  ++ +K           +G L+ E GVH
Sbjct: 123 DLLRMYLRYAERRGWRTEILDANPSDLGGYRDVSVAVKARGSAGPGQGVFGRLRFEGGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V P   D        +D RID +R+SG GGQ VNTTDS
Sbjct: 183 RVQRVPVTESAGRIHTSAAGVLVLPEAADVDVDV-DPNDLRIDVFRSSGPGGQSVNTTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307
           AVRITH+PTGVVV CQ E+SQ +NK  A  +LR++L     +K E  A    +S+   + 
Sbjct: 242 AVRITHLPTGVVVSCQNEKSQLQNKESAMRILRSRLLAAAREKAESEAAAARASQVRTVD 301

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   + D R N +  +   VLDGDLD  + A +   +
Sbjct: 302 RSEKIRTYNF-PENRISDHRINYKAHNLEQVLDGDLDAVVDALIEADQ 348


>gi|254424165|ref|ZP_05037883.1| peptide chain release factor 1 [Synechococcus sp. PCC 7335]
 gi|196191654|gb|EDX86618.1| peptide chain release factor 1 [Synechococcus sp. PCC 7335]
          Length = 367

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 105/348 (30%), Positives = 179/348 (51%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +    L  +  DP + ++  E + + + R  L+  +    + Q+   +     E+
Sbjct: 10  LESVEETFGELTRRMADPDVAKDPDEFQKIAKMRASLEETVQTYHQWQETDGELAGAREV 69

Query: 76  ALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E    S ++E +        E      +  +   L     D  +  LE+ AG GG E+
Sbjct: 70  YKEAASDSEMKEMAAMEVTELEESLAALEKRLKILLLPRDPNDDKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  LLR+Y+R+AE + +K   L     +  G+K A + I+G   Y  LK E GVHR+
Sbjct: 130 GIWAGDLLRLYSRYAEGQGWKANLLSESRADMGGVKEAIVEIQGNQVYSKLKFESGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +EI I   +  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPLTESGGRVHTSTATVAVMP-EVDDVEIHIDPKEIVMTTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C +ERSQ +N+ +A  +LRAKLYE++LQ++++   I    K+++G G 
Sbjct: 249 DLIHKPTGIRVFCTEERSQLQNRERAMQILRAKLYEMKLQEQKDE--ISSMRKSQVGSGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R N +  S   VL+GD++  ++  ++  +
Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLN-QNFSLPAVLEGDIETVVQTCISQDQ 352


>gi|228469749|ref|ZP_04054715.1| peptide chain release factor 2, programmed [Porphyromonas uenonis
           60-3]
 gi|228308684|gb|EEK17417.1| peptide chain release factor 2, programmed [Porphyromonas uenonis
           60-3]
          Length = 328

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 129/321 (40%), Positives = 197/321 (61%), Gaps = 11/321 (3%)

Query: 41  EAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE 100
            A+  MR    + + I   + +     +  +  +     ++    Q+  D   R    VE
Sbjct: 3   RAQQQMRRVGEIRSWIEAFEAVDAATQEVALAYDFYK--EEAVEEQDVDDAYARAIKLVE 60

Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
             +  ++LS E D   A L+V+AGAGGTESQDWA+ML+RMY RWAE+  +K       DG
Sbjct: 61  DLELRNMLSAEEDRLGAVLKVNAGAGGTESQDWASMLVRMYQRWAERSGYKVTITNWQDG 120

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220
           ++AG+K+ T+ I+G  AYG+LK E GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE
Sbjct: 121 DDAGVKTVTMQIEGELAYGFLKSENGVHRLVRVSPYNAQGKRMTSFASVFVVPLVDDSIE 180

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG--------VVVQCQQERSQHKN 272
           +E++ +    DT+R+SGAGGQ+VN  ++ VR+ +  T         +V++  + RSQ +N
Sbjct: 181 VEVNPALLSWDTFRSSGAGGQNVNKVETGVRLHYQYTDPDTGVPEEIVIENTETRSQLEN 240

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           +  A  +LR++LY+ EL++R    N  E++K +I WG QIRSYV    + VKD RT  + 
Sbjct: 241 RENALRLLRSQLYDKELERRRAAQNEVEANKKKIEWGSQIRSYVFDD-RRVKDHRTGYQT 299

Query: 333 TSPSDVLDGDLDDFMKATLAI 353
           +  + V+DGD+D F+KA L  
Sbjct: 300 SDVNGVMDGDIDAFIKAYLMQ 320


>gi|25011160|ref|NP_735555.1| peptide chain release factor 1 [Streptococcus agalactiae NEM316]
 gi|76798425|ref|ZP_00780665.1| peptide chain release factor 1 [Streptococcus agalactiae 18RS21]
 gi|77408667|ref|ZP_00785400.1| peptide chain release factor 1 [Streptococcus agalactiae COH1]
 gi|77410552|ref|ZP_00786913.1| peptide chain release factor 1 [Streptococcus agalactiae CJB111]
 gi|77413289|ref|ZP_00789485.1| peptide chain release factor 1 [Streptococcus agalactiae 515]
 gi|32171550|sp|Q8E5C3|RF1_STRA3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|23095559|emb|CAD46768.1| peptide chain release factor 1 [Streptococcus agalactiae NEM316]
 gi|76586220|gb|EAO62738.1| peptide chain release factor 1 [Streptococcus agalactiae 18RS21]
 gi|77160676|gb|EAO71791.1| peptide chain release factor 1 [Streptococcus agalactiae 515]
 gi|77163500|gb|EAO74450.1| peptide chain release factor 1 [Streptococcus agalactiae CJB111]
 gi|77172715|gb|EAO75851.1| peptide chain release factor 1 [Streptococcus agalactiae COH1]
 gi|319745079|gb|EFV97405.1| peptide chain release factor RF1 [Streptococcus agalactiae ATCC
           13813]
          Length = 359

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 97/348 (27%), Positives = 165/348 (47%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  + +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQNISDAEEM 66

Query: 76  ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + L+E +    +      +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDAELEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E EI + D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYEIDQKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ +G G 
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQ 350


>gi|281420644|ref|ZP_06251643.1| peptide chain release factor 1 [Prevotella copri DSM 18205]
 gi|281405417|gb|EFB36097.1| peptide chain release factor 1 [Prevotella copri DSM 18205]
          Length = 369

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 89/354 (25%), Positives = 155/354 (43%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   ++T   DP +  +      L +E + L + +   K   + L       ++
Sbjct: 10  LEGLESRYEEVSTLITDPDVIADQPRYVKLTKEWKDLGDIMDARKRYINCLNSIKEAKDI 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L   +      + E           D+ +  +E+  GAGG E+ 
Sbjct: 70  LANESDPEMKEMAREELNENEALQPKLEEEIKIALVPKDPEDAKNVQMEIRGGAGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY ++ E + +      + +G   G K     + G + YG LK E GVHR+ 
Sbjct: 130 LFAGDLFNMYKKYCESKGWTVSVTSVSEGAVGGYKEIDFAVSGTDVYGTLKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P  D      I+E D + DT+R+SGAGGQ+VN  +S VR
Sbjct: 190 RVPATETQGRMHTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKVESGVR 248

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +            ++++C + R Q KNK +A + L   +++ E QK   + +I    K
Sbjct: 249 LRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTFIHDREHQKY--VDDIASRRK 306

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + +  G +   IR+Y   P   V D R        +  L GD+ D + A    +
Sbjct: 307 SLVSTGDRSAKIRTYNF-PQGRVTDHRIGYTTHDLNGFLAGDIQDMIDALTVAE 359


>gi|300867105|ref|ZP_07111771.1| Peptide chain release factor 1 [Oscillatoria sp. PCC 6506]
 gi|300334860|emb|CBN56937.1| Peptide chain release factor 1 [Oscillatoria sp. PCC 6506]
          Length = 365

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 101/348 (29%), Positives = 181/348 (52%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q  + L  +  DP + ++  E + + + R  L+  ++  +  ++   +     ++
Sbjct: 10  LKSVEQTFNELTRRMADPDVAKDPNEFQRVAKARSSLEEVVNTFELWKETQENLAGAKQI 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130
             E      +QE +        +         +   L     D  +  LE+ AG GG E+
Sbjct: 70  LKESASDPEMQEMASLEVGELEDKSDYLESRLKVLLLPRDPNDDKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY+R+A+ + ++ + L    GE  G K A L I+G + Y  LK E GVHR+
Sbjct: 130 SIWAADLVRMYSRYAQSQNWQVKMLSESVGESRGFKEAILEIQGDSVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   D +EI I   D  + T R+ GAGGQ+VN  ++A 
Sbjct: 190 QRVPVTEAGGRVHTSTATVAVMP-EVDDVEIHIDPKDIEMSTARSGGAGGQNVNKVETAA 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +NK +A  +LRAKLYE++L+++++   +    ++++G G 
Sbjct: 249 DLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMKLREQQDE--VTSMRRSQVGTGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R   E  S + +L+GD+DD ++A +++ +
Sbjct: 307 RSEKIRTYNYKD-NRATDHRLG-ENFSLNTILEGDIDDVIQACISLDQ 352


>gi|257056964|ref|YP_003134796.1| peptide chain release factor 1 [Saccharomonospora viridis DSM
           43017]
 gi|256586836|gb|ACU97969.1| bacterial peptide chain release factor 1 (bRF-1) [Saccharomonospora
           viridis DSM 43017]
          Length = 358

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 110/354 (31%), Positives = 173/354 (48%), Gaps = 16/354 (4%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
             L GL D        + L  +  DP +  +   A+ L R    L   +  + E++    
Sbjct: 4   ESLRGLLD------EYAELEKQLADPAVHADQARARKLGRRYSELSPVVKTVGELETTRS 57

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           +     ELA E+   +   +              +          D +D  +E+ +G GG
Sbjct: 58  ELEAAKELAAEDSSFAEEVDRLGKRVSALETKLAELLL--PRDPYDGSDVVMEIKSGEGG 115

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLK 182
            ES  +A  LLRMY R+AE++ +  E L+    +  G K  T+ +K         +  LK
Sbjct: 116 EESALFAGDLLRMYLRFAERQGWTAEILDATPSDLGGYKDVTVSVKSKGTEAEGVWACLK 175

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E GVHR+ R+   +S  R HTS + + +Y    + IE+EI  +D RID +R+SG GGQ 
Sbjct: 176 FEGGVHRVQRVPATESQGRIHTSAAGVLIY-PEPEEIEVEIDPNDLRIDVFRSSGPGGQS 234

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVR+TH+PTG+VV CQ E+SQ +N+A+A  +L+A+L  L  ++    A     S
Sbjct: 235 VNTTDSAVRVTHLPTGIVVSCQNEKSQIQNRARAIQVLQARLQALAEEEAAAKAADARRS 294

Query: 303 KTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +   +    ++R+Y   P   + D R N +  +   VLDG+L   ++A  A  +
Sbjct: 295 QVRTVDRSERVRTYNF-PENRISDHRVNYKAYNLDQVLDGELSGVLEALRAADR 347


>gi|222149911|ref|YP_002550868.1| peptide chain release factor 1 [Agrobacterium vitis S4]
 gi|254790856|sp|B9JT13|RF1_AGRVS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|221736893|gb|ACM37856.1| peptide chain release factor 1 [Agrobacterium vitis S4]
          Length = 359

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 176/344 (51%), Gaps = 18/344 (5%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILL 73
              +R   +  +    P           L  E   L   +  I+E+   +  + D   LL
Sbjct: 11  ELERRFGEIEARMSAGPA----ADVYVKLASEYSELQPVVKAIRELGLAEKEVADLKALL 66

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA--DSNDAYLEVHAGAGGTESQ 131
                + +   L E        +LE   K+ +  L  +   D   A LE+ AG GG+E+ 
Sbjct: 67  ADKSTDREMRDLAEMELPDVEARLEGLEKEIQIQLLPKDAADEKSAILEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A  + +K E L   +G+  G K     + G   +  LK E GVHR+ 
Sbjct: 127 LFAGDLFRMYERFAAGKGWKVEVLSSSEGDAGGFKEIIATVTGRGVFSKLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + I+IE+   D RIDT R+SGAGGQHVNTTDSAVR
Sbjct: 187 RVPDTETQGRIHTSAATVAVLP-EAEEIDIEVRAEDIRIDTMRSSGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV    E+SQH+N+A+A  +LR++L+++E Q+    +      K+++G G  
Sbjct: 246 ITHLPTGLVVTSS-EKSQHQNRAKAMQVLRSRLFDMERQR--ADSERSADRKSQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       ++ G++D+ + A +A
Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLYKLDRMMMGEIDEVVDALIA 345


>gi|157825817|ref|YP_001493537.1| peptide chain release factor 1 [Rickettsia akari str. Hartford]
 gi|166223595|sp|A8GNQ4|RF1_RICAH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157799775|gb|ABV75029.1| peptide chain release factor 1 [Rickettsia akari str. Hartford]
          Length = 355

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 124/349 (35%), Positives = 184/349 (52%), Gaps = 16/349 (4%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           +    + +   L  K     +  +  E     +E   L++ +  IKE      +      
Sbjct: 6   NLAKILDKYDNLGKKLSS-GIMGD--EFVKASKEYAELEDVVVKIKEYNKAKSELEEANN 62

Query: 75  LALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LE    +      ++   I            +   L   +ADS  A +EV AG+GG E
Sbjct: 63  FKLELGFDNATLAMIEDEIHILENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGGEE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A +L  MY R+AE + ++ E L I D    G K A+  IKG + +  LK E GVHR
Sbjct: 123 AALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P   + ++I+I + D RIDTYRASGAGGQHVNTTDSA
Sbjct: 183 VQRVPETESQGRIHTSAATVAVLP-EAEEVDIKIEDKDLRIDTYRASGAGGQHVNTTDSA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG+ V  Q E+SQHKNKA+A  +LRA++Y  E ++R +     +S + +IG G
Sbjct: 242 VRITHIPTGITVALQDEKSQHKNKAKALKILRARIY--EEERRNKEQERADSRRGQIGSG 299

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIK 354
               +IR+Y   P   V D R N+      +V+ +G LD+F++A +A  
Sbjct: 300 DRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFIEALIAED 347


>gi|282879521|ref|ZP_06288252.1| peptide chain release factor 1 [Prevotella timonensis CRIS 5C-B1]
 gi|281306469|gb|EFA98498.1| peptide chain release factor 1 [Prevotella timonensis CRIS 5C-B1]
          Length = 370

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 91/354 (25%), Positives = 154/354 (43%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   ++T   DP +  +      L +E + L + +   K     L       ++
Sbjct: 11  LEGLEARFEEVSTLITDPDVIADQPRYVKLTKEYKDLGDIMDIRKRYIACLNAIRESKDI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + LQ  +      + E           D+ +  +E+ AG GG E+ 
Sbjct: 71  LANETDADMKEMAREELQANEDMQPQLEEEIKLALVPKDPEDAKNVQMEIRAGTGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY  + + + +      +++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 LFAGDLFNMYKHYCDSKGWTLSVTSVNEGSVGGYKEIDFAVSGDNVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P  D      I+E D + DT+R+SGAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRMHTSAATVAVLPEADQFEVN-INEGDIKWDTFRSSGAGGQNVNKVESGVR 249

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +            ++++C + R Q KNK +A + LR  +Y+ E QK   I +I    K
Sbjct: 250 LRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLRTFIYDREHQKY--IDDIANRRK 307

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + +  G +   IR+Y   P   V D R           + GD+   + A    +
Sbjct: 308 SLVSTGDRSAKIRTYNY-PQGRVTDHRIGYTTHDLQGFIGGDIQGVIDALTVAE 360


>gi|297559304|ref|YP_003678278.1| peptide chain release factor 1 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296843752|gb|ADH65772.1| peptide chain release factor 1 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 356

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 112/349 (32%), Positives = 170/349 (48%), Gaps = 12/349 (3%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
              D+ +     L  +  DP +  +   A+ L +    L   I   + +++   D     
Sbjct: 1   MKLDDLLGEYYELEQQLADPEVHADQARARTLGKRYAQLTPIIETYRALKEVESDIDTAR 60

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ELA E+   +   +        +   E  +   +    AD  +  +EV AG GG ES  +
Sbjct: 61  ELAAEDSSFAEEADRLTEEA--ERLTERLRVLLIPRDPADDKNLIMEVKAGEGGEESALF 118

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-------YGWLKGEQG 186
           A  L+RMY R+AE++ +KTE ++    +  G K  T+  K           +  LK E G
Sbjct: 119 AGDLVRMYLRYAERQGWKTEVIDSTHSDLGGYKDITIAFKNKGTPEPGSGVWPMLKFEGG 178

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS + + V P   + IE+EI E D R+D YR+SG GGQ VNTT
Sbjct: 179 VHRVQRVPVTESQGRIHTSAAGVLVVP-EAEDIEVEIHEKDLRVDVYRSSGPGGQSVNTT 237

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE- 305
           DSAVRITH+PTG+V  CQ E+SQ +NK QA  +LRA++Y       +  A     S+   
Sbjct: 238 DSAVRITHLPTGIVASCQNEKSQLQNKEQAMRILRARIYAEAQASADAEAAAERKSQVRT 297

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +    ++R+Y   P   + D R   +  +   VLDG+L   +KA +   
Sbjct: 298 VDRSERVRTYNF-PENRISDHRVGYKAYNLDQVLDGELGGVVKALVDAD 345


>gi|291297042|ref|YP_003508440.1| peptide chain release factor 1 [Meiothermus ruber DSM 1279]
 gi|290472001|gb|ADD29420.1| peptide chain release factor 1 [Meiothermus ruber DSM 1279]
          Length = 358

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 101/348 (29%), Positives = 168/348 (48%), Gaps = 9/348 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + +  ++       L  +  DP +  N  E + + +    + + +  I+  ++ L     
Sbjct: 1   MLEKLESLEAEYQALERQLADPAVLANQSEYQRISKRYAEMGHLVETIRSYKEALTHLAE 60

Query: 72  LLELALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             EL  + +   + +        RI+      +   L     D  +A +E+ AG GG E+
Sbjct: 61  ARELQFDPELGEMARADIAALEPRIRELEAELELLLLPKDPLDEKNAIVEIRAGTGGEEA 120

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L  M   +A++  ++ E L+    +  G+      + GP AYG+LK E GVHR+
Sbjct: 121 ALFAAELRDMIMEYAKQGGYRVEVLDTSLTDLGGVSKVVFEVSGPGAYGYLKYEAGVHRV 180

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++++I  +D  I   RASG GGQ VNTTDSAV
Sbjct: 181 QRVPATETQGRIHTSTATVAVMP-EAEEVDVQIDPADLEITVSRASGPGGQGVNTTDSAV 239

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG--- 307
           ++ H PTG++V C + RSQ KNK +A ++LR++L  LE+++ EE A   E    +IG   
Sbjct: 240 QVLHKPTGMIVSCMESRSQIKNKEKALSILRSRL--LEMKRAEEAARRREDRLAQIGAGE 297

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R          VL GDL    +A     +
Sbjct: 298 RSEKIRTYNF-PQSRVTDHRIGFTTHDLEGVLAGDLSKLHEALRKADQ 344


>gi|94496666|ref|ZP_01303242.1| peptide chain release factor 1 [Sphingomonas sp. SKA58]
 gi|94424026|gb|EAT09051.1| peptide chain release factor 1 [Sphingomonas sp. SKA58]
          Length = 361

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 113/348 (32%), Positives = 175/348 (50%), Gaps = 15/348 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   +        L     +   L +E   ++   +  +E++    +   L  +
Sbjct: 8   IAQIEARRDEVQASMTRADLA--PDQFVRLSKEYAEIEPVAAAARELRRLRQELAALEMM 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
              E+    +++ +    ++              + L    AD+  A LE+ AG GG E+
Sbjct: 66  TGGEEADPAMRDMAQEEMQLLKSQLPAAERALALQLLPRDAADARPAMLEIRAGTGGDEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A+ + +K E L  +  E+ G K     I G   +  LK E GVHR+
Sbjct: 126 ALFAGDLFRMYQRYADTQGWKMEMLSANASEQGGFKEVVASINGAGVFAKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + ++++I+++D +ID YRASGAGGQHVNTTDSAV
Sbjct: 186 QRVPVTESGGRIHTSAATVAVLP-EPEEVDVQIADADLKIDIYRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VV  Q ERSQHKNKA+A  +LRA+LYE E ++ +         K  +G G 
Sbjct: 245 RITHVPTGIVVTQQDERSQHKNKAKAMQVLRARLYEAERERTQNEQAGA--RKAMVGSGD 302

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIK 354
              +IR+Y   P   V D R N+      ++L+G  L + + A  A  
Sbjct: 303 RSERIRTYNF-PQGRVTDHRINLTLHRLPEILEGPGLSEVIDALTAED 349


>gi|313889382|ref|ZP_07823030.1| peptide chain release factor 1 [Streptococcus pseudoporcinus SPIN
           20026]
 gi|313122214|gb|EFR45305.1| peptide chain release factor 1 [Streptococcus pseudoporcinus SPIN
           20026]
          Length = 359

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 97/348 (27%), Positives = 164/348 (47%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +   R   L     DP +  +      L +E     + ++  ++ ++ +       E+
Sbjct: 7   LQSLEDRYEELGELLSDPEVVSDTKRFMQLSKEEASTRDTVTAYRQYKEIIQSIADAEEM 66

Query: 76  ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E    S ++E +    +      +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDSEIEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLVMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E EI   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEDVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI HIPT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHIPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEIVDALIMYDQ 350


>gi|299529204|ref|ZP_07042649.1| peptide chain release factor 2 [Comamonas testosteroni S44]
 gi|298722827|gb|EFI63739.1| peptide chain release factor 2 [Comamonas testosteroni S44]
          Length = 248

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 144/247 (58%), Positives = 186/247 (75%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           +  GEAD  + ++++ AGAGGTE+ DWA+MLLR Y ++AE++ FK    E   G+ AGIK
Sbjct: 1   MFGGEADPLNCFIDIQAGAGGTEACDWASMLLRQYLKYAERKGFKATVEEETPGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ ++G  AYG L+ E GVHRLVR SP+DS+  RHTSFSS++VYP +DDSIEI I+ S
Sbjct: 61  SATIKVEGEYAYGLLRTETGVHRLVRKSPFDSSGGRHTSFSSLFVYPEIDDSIEININPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D R DTYRASGAGGQH+N TDSAVR+THIPTG+VVQCQ  RSQH N+  AW  LR++LY+
Sbjct: 121 DVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYD 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E++KR E     E +KT++GWG QIRSYVL     +KDLRTN+E ++   VLDGDLD F
Sbjct: 181 FEMRKRMEEQQKLEDTKTDVGWGHQIRSYVLD-NSRIKDLRTNVEVSATQKVLDGDLDVF 239

Query: 347 MKATLAI 353
           ++A+L  
Sbjct: 240 IEASLKQ 246


>gi|88807914|ref|ZP_01123425.1| peptide chain release factor 1 [Synechococcus sp. WH 7805]
 gi|88787953|gb|EAR19109.1| peptide chain release factor 1 [Synechococcus sp. WH 7805]
          Length = 365

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 101/348 (29%), Positives = 165/348 (47%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + A      L  +  DP +  +    + + RER  L+  ++    +Q    +     EL
Sbjct: 10  LEAARDSFHNLERQLADPDVASDPTRLQSIARERSRLEPLVNDYTSLQSVQAEREQAREL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130
             +      +   +        +      + L          D     LE+ AGAGG E+
Sbjct: 70  LRDSRGDEEMANLAQLELEELDKRHEVLIQRLTLALLPKDPRDERSVMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R++ +R +  + +   + +  G K   L +KG + +  LK E GVHR+
Sbjct: 130 CLWAGDLARMYERFSSRRGWTVQPVSASEADLGGFKELILSVKGDSVFSELKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +E++I  +D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADPVEVQIEPADLEISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H P+G+ V C QERSQ +N+ +A  +LRAKLY  E Q  E  A    + + ++G G 
Sbjct: 249 DLMHRPSGIRVFCTQERSQLQNRERAMEILRAKLY--ERQLAEANARESSARRAQVGTGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R     +    VL G ++D + A +A ++
Sbjct: 307 RSEKIRTYNAKD-NRVTDHRLGRNFS-LDPVLQGQMEDVIGACIAEEQ 352


>gi|91205113|ref|YP_537468.1| peptide chain release factor 1 [Rickettsia bellii RML369-C]
 gi|119361596|sp|Q1RJT5|RF1_RICBR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91068657|gb|ABE04379.1| Peptide chain release factor RF-1 [Rickettsia bellii RML369-C]
          Length = 357

 Score =  206 bits (525), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 122/346 (35%), Positives = 181/346 (52%), Gaps = 15/346 (4%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           +    + +   L+ K     +     E     +E   L++ +  IKE      +      
Sbjct: 9   NLTKILGKYEDLSEKLSS-GIGG--EEFVKASKEYADLEDIVQKIKEYNKAKAELEEANN 65

Query: 75  LALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E        E  +   R   +         +   L   EADS  A +E+ AG GG E
Sbjct: 66  FKQEPSLDKATLEMIEEEIRNLEDSLPTLERSVKIALLPKDEADSKSAIIEIRAGTGGEE 125

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L  MY R+AE + ++ E L I +    G K  +  IKG + +  LK E GVHR
Sbjct: 126 AALFAAKLFNMYQRYAELKGWRFEILSIDETGIGGYKEVSASIKGKDVFSKLKFESGVHR 185

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P   + ++I++ E D RIDTYRASGAGGQHVNTTDSA
Sbjct: 186 VQRVPETESQGRIHTSAATVAVLP-EVEDVDIKLEEKDLRIDTYRASGAGGQHVNTTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG+ V  Q E+SQHKNKA+A  +LRA++YE E +K+++      + + +IG G
Sbjct: 245 VRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKDQER--ANNRRKQIGSG 302

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               +IR+Y   P   V D R N+      +V++G LD+F++A +A
Sbjct: 303 DRSERIRTYNF-PQGRVSDHRINLTLYKIDEVINGQLDEFIEALIA 347


>gi|325002820|ref|ZP_08123932.1| peptide chain release factor 1 [Pseudonocardia sp. P1]
          Length = 358

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 118/345 (34%), Positives = 178/345 (51%), Gaps = 8/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +   + L  +  DP +  + ++A+ L +    L   +   +++     D     EL
Sbjct: 6   VDSLLDEYAELEQRLADPEVLADQVQARKLGKRYAQLGPVVRCARDLAQAREDRDAAREL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D S   E      R+           +     DS+D  +EV +G GG ES  +A 
Sbjct: 66  --ASEDRSFAAEADALDVRVVELETELAELLVPRDPHDSDDVLMEVKSGEGGEESALFAG 123

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA----YGWLKGEQGVHRLV 191
            L+RMYTR+AE R +K E L     +  G K  TL ++  +     +  LK E GVHR+ 
Sbjct: 124 DLVRMYTRYAESRGWKVELLGSTPSDLGGFKDVTLSVRSKDPAQGAWAALKFEGGVHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS + + V+P  D++ ++EI E D R+D +RASG GGQ VNTTDSAVR
Sbjct: 184 RVPVTESQGRIHTSAAGVLVFPDADETPDVEIDEKDIRVDVFRASGHGGQSVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGR 310
           ITH+P+G+VV CQ ERSQ +NKA+A ++LRA+L      +  E A+    S+   +    
Sbjct: 244 ITHLPSGIVVSCQNERSQLQNKARAMDVLRARLQAKAEAEAAEAASEQRRSQVRTVDRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   + D R   +  + S VLDG+L D   A  A  +
Sbjct: 304 RIRTYNF-PENRISDHRVGFKAHNLSSVLDGNLTDVFAALTAADR 347


>gi|258648524|ref|ZP_05735993.1| peptide chain release factor 1 [Prevotella tannerae ATCC 51259]
 gi|260851292|gb|EEX71161.1| peptide chain release factor 1 [Prevotella tannerae ATCC 51259]
          Length = 371

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 96/354 (27%), Positives = 163/354 (46%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   ++T   DP +  +      L +E + L++ +   K   + L +      L
Sbjct: 12  LDGLRSRFEEVSTLITDPSVIADQTRYVRLTKEYKELEDLMQARKRYAELLSNLQESKNL 71

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
            L E D  + +   + +   + E+   +       +     D  +A LE+ AG GG E+ 
Sbjct: 72  LLTETDAELKELAREEVAACEAEIPTCEEQIKLMLVPKDPEDGKNAILEIRAGTGGDEAA 131

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + +K E    ++G   G K     + G + YG LK E GVHR+ 
Sbjct: 132 LFAGDLFRMYAKFCESKGWKFEVSSANEGAVGGFKEVVASVTGADVYGTLKYESGVHRVQ 191

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P  +      I E + R +T+R+SGAGGQ+VN  +S VR
Sbjct: 192 RVPATETQGRVHTSAATVAVLPEAEAFDVE-IHEGEIRWETFRSSGAGGQNVNKVESGVR 250

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +            ++++C + R Q KNK +A   LR  +Y+ E QK   + +I    K
Sbjct: 251 LRYDWKNPNTGETEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY--VDDIANRRK 308

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T +  G +   IR+Y   P   + D R N    +    +DGD+ D +   +  +
Sbjct: 309 TLVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLPAFVDGDIQDCIDQLMVAE 361


>gi|66361428|pdb|1ZBT|A Chain A, Crystal Structure Of Peptide Chain Release Factor 1 (Rf-1)
           (Smu.1085) From Streptococcus Mutans At 2.34 A
           Resolution
          Length = 371

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 95/348 (27%), Positives = 157/348 (45%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  + +     E 
Sbjct: 19  LQAVEDRYEELGELLSDPDVVSDTKRFXELSREEANSRETVAVYREYKQVVQNIADAQEX 78

Query: 76  ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +      L+E +    +      +   E  +F  L     D  +  LE+   AGG E+
Sbjct: 79  IKDASGDPELEEXAKEELKNSKVAKEEYEEKLRFLLLPKDPNDDKNIILEIRGAAGGDEA 138

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL  Y ++AE + +K E  E       G+K     + G + Y  LK E G HR+
Sbjct: 139 ALFAGDLLNXYQKYAENQGWKFEVXEASANGVGGLKEVVAXVSGQSVYSKLKYESGAHRV 198

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++       + +E EI   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 199 QRVPVTESQGRVHTSTATVL-VXPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 257

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ +G G 
Sbjct: 258 RIIHLPTNIKVEXQEERTQQKNRDKAXKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 315

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 316 RSERIRTYNF-PQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILYDQ 362


>gi|268678716|ref|YP_003303147.1| peptide chain release factor 1 [Sulfurospirillum deleyianum DSM
           6946]
 gi|268616747|gb|ACZ11112.1| peptide chain release factor 1 [Sulfurospirillum deleyianum DSM
           6946]
          Length = 355

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 114/340 (33%), Positives = 177/340 (52%), Gaps = 9/340 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
            R + L     DP++  ++ +   L +E+ +L+       E    L        L  +E+
Sbjct: 11  DRYNELTMLLSDPNVSNDIKKMTALSKEQSNLEPIKEKTLEYFSTLEQIEENRFLLEDEE 70

Query: 81  DCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
              + +E    L+  K    +  +   L     D  + +LE+ AG GG E+  +A  L +
Sbjct: 71  LGELAKEELKLLEPHKEILEDEIKLLLLPKDPNDERNIFLEIRAGTGGDEAAIFAADLFK 130

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
            Y R+AE R +K E + + +G   G K    LIKG  A+  LK E GVHR+ R+   +S 
Sbjct: 131 SYLRYAENRGWKVEVVSLSEGVLNGYKEVIALIKGQGAFSRLKYEGGVHRVQRVPLTESQ 190

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ V P   D +E++I E D +ID  R+SG GGQ VNTTDSAVRITH+PTG+
Sbjct: 191 GRVHTSAVTVAVMP-EVDDVEVDIQEKDLKIDVMRSSGNGGQSVNTTDSAVRITHLPTGI 249

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYV 316
           VV  Q  +SQHKNK  A  +L+AKLY++++Q+R   A   E+ K ++G G    +IR+Y 
Sbjct: 250 VVVNQDGKSQHKNKDAAMKILKAKLYDMQMQERN--AKESEARKQQVGSGDRSARIRTYN 307

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLAIKK 355
             P   + D R  +       +++G L D+ +   +   +
Sbjct: 308 Y-PQNRITDHRVGLTLYRLDAIMEGGLYDELIDPIITHYQ 346


>gi|311898376|dbj|BAJ30784.1| putative peptide chain release factor 1 [Kitasatospora setae
           KM-6054]
          Length = 358

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 174/347 (50%), Gaps = 13/347 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +  +   + L  +  DP +  +   A+ L +    L          +    D + 
Sbjct: 1   MFEAVEELLVEHADLEKRLADPSVHADQANARKLAKRYAELTPITRTYLAWRQAGEDIVA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EL    +D   + E   +  R     E  +   +     D  D  LEV AG GG ES 
Sbjct: 61  AREL--ATEDPDFIAEAKASEARQDELTEELRLLLVPRDPNDDKDVILEVKAGEGGEESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-------AYGWLKGE 184
            +A  LLRMY R+AE+  +KTE ++ ++ +  G K  ++ +K           +  LK E
Sbjct: 119 LFAGDLLRMYLRYAERVGWKTELIDANESDLGGYKDVSVAVKTRGSAEPGQGVWARLKYE 178

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS + + V P   + +E+EI  +D RID YR+SG GGQ VN
Sbjct: 179 GGVHRVQRVPATESQGRIHTSAAGVLVTP-EAEEVEVEIHANDLRIDVYRSSGPGGQSVN 237

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRITH+PTG+V  CQ E+SQ +NK QA  +LR++L     ++ E  A+    S+ 
Sbjct: 238 TTDSAVRITHLPTGIVASCQNEKSQLQNKEQAMRILRSRLLAAAQEEAEREASDARRSQV 297

Query: 305 E-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +    +IR+Y   P   + D RT  +  +   VLDGDL+  +++ 
Sbjct: 298 RTVDRSERIRTYNF-PENRISDHRTGFKSYNLDQVLDGDLNAVIQSC 343


>gi|194364499|ref|YP_002027109.1| peptide chain release factor 1 [Stenotrophomonas maltophilia
           R551-3]
 gi|238693440|sp|B4SKS8|RF1_STRM5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|194347303|gb|ACF50426.1| peptide chain release factor 1 [Stenotrophomonas maltophilia
           R551-3]
          Length = 360

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 107/323 (33%), Positives = 169/323 (52%), Gaps = 8/323 (2%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN- 91
           P +  +    + L RE   L+   + + +      D      +  + D   +  E     
Sbjct: 26  PDVVADNTRFRDLSREFAQLEPIATALADETRAKADLAAAEGMRADPDLRELADEEIAAA 85

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
             R++   +      +     D  + +LEV AG GG E+  +A  L RMY R+AE++ +K
Sbjct: 86  QARLQELEQELALLLVPRDPRDDGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWK 145

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E    + GE  G K     + G  A+  LK E G HR+ R+   +S  R HTS +++ +
Sbjct: 146 VEIESDNPGEHGGYKEVVARVVGRGAFSRLKFESGTHRVQRVPATESQGRIHTSAATVAI 205

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P  D+  +I I+ +D R+DT+R+SGAGGQHVN T+SA+RITH+PTGVVV+CQ ERSQH 
Sbjct: 206 IPEADEVDDIVINPADLRVDTFRSSGAGGQHVNKTESAIRITHVPTGVVVECQTERSQHA 265

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRT 328
           N+ +A   L+A+L + E Q+++  A   ES + ++G G    +IR+Y   P   + D R 
Sbjct: 266 NRDKAMKRLKAQLLDAERQRQD--AAQAESRRLQVGSGDRSQRIRTYNF-PQGRITDHRV 322

Query: 329 -NIEKTSPSDVLDGDLDDFMKAT 350
             +      ++L GDLD  ++  
Sbjct: 323 EGLTLYDLPNILAGDLDPLLQRL 345


>gi|183984069|ref|YP_001852360.1| peptide chain release factor 1 PrfA [Mycobacterium marinum M]
 gi|238690952|sp|B2HQL3|RF1_MYCMM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|183177395|gb|ACC42505.1| peptide chain release factor 1 PrfA [Mycobacterium marinum M]
          Length = 357

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 109/332 (32%), Positives = 159/332 (47%), Gaps = 9/332 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L     DP L     EA+   R    L   ++  +++     D     EL
Sbjct: 8   IDVLLAEHADLERALADPELHSRPDEARKAGRRFARLAPIVATYRKLVAAREDLETAHEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A  ++  +      +                      D++D  LEV +G GG ES  +A 
Sbjct: 68  AATDESFAAEAAELEARVAELDSQLTDML--APRDPHDADDIVLEVKSGEGGEESALFAA 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-----KGPNAYGWLKGEQGVHRL 190
            L RMY R+AE+  +    L     +  G K ATL I          +  +K E GVHR+
Sbjct: 126 DLARMYIRYAERHGWTVTVLGETTSDLGGYKDATLAIASKGDTADGVWSRMKFEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + VYP  ++  E++I ESD RID YR+SG GGQ VNTTDSAV
Sbjct: 186 QRVPVTESQGRVHTSAAGVLVYPEPEEVGEVQIDESDLRIDVYRSSGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG+VV CQ ERSQ +NK +A  +L A+L  +  ++    A+   +S+   +   
Sbjct: 246 RITHLPTGIVVTCQNERSQLQNKIRAMQVLGARLQAIAEEQAMADASADRASQIRTVDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
            +IR+Y   P   + D R   +  +   VLDG
Sbjct: 306 ERIRTYNF-PENRITDHRIGYKSHNLDQVLDG 336


>gi|319407578|emb|CBI81228.1| peptide chain release factor 1 [Bartonella sp. 1-1C]
          Length = 359

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 119/348 (34%), Positives = 181/348 (52%), Gaps = 18/348 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               +R   + ++  + P    N      L  E   L   I+ I+ +     +   L  +
Sbjct: 10  KQLEKRFKIIESQMAENP----NAETYVKLASEYAELQPIIAPIRTLNSLRKEIAELETI 65

Query: 76  ALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  +        Q+I+   +  Q   L    AD     +E+ AG GG+E+
Sbjct: 66  ISDIQTDTEMRNLAQEELSSLSQKIQELEKELQILLLPKDIADEKSVIIEIRAGTGGSEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A    +K E + + DGE  G K     I G   +  LK E GVHR+
Sbjct: 126 ALFAGNLFRMYERYANTHNWKVEIISLSDGEVGGYKEIIATISGKGVFSKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            RI   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 186 QRIPETETGGRIHTSAATVAVLP-EAEEIDIEIRSEDIRIDTMRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+L+++E QK    +    S KT++G G 
Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQK--AESERSASRKTQVGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       +++GDL++ + A ++  +
Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRIMEGDLNELINALISDHQ 348


>gi|304394129|ref|ZP_07376052.1| peptide chain release factor 1 [Ahrensia sp. R2A130]
 gi|303293569|gb|EFL87946.1| peptide chain release factor 1 [Ahrensia sp. R2A130]
          Length = 358

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 123/350 (35%), Positives = 178/350 (50%), Gaps = 19/350 (5%)

Query: 16  WDNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
            +  V R + +     + P    +      L +E   LD  +  I E+Q    +   L  
Sbjct: 7   IEQLVSRHAEVARLMSENP----DQETYVKLAKEYAELDPVVIKIGEMQAAQSEFADLAG 62

Query: 75  LALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           +  + D  + ++E +           +      Q   L   EAD+ +A LE+ AG GG+E
Sbjct: 63  MLADGDTDAEMKEMAQAEMEPLKAAIEEHEAELQILLLPRDEADAKNAILEIRAGTGGSE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY R AE   +K + L    GE  G K     I G   +  LK E GVHR
Sbjct: 123 AALFAGDLFRMYQRHAETSGWKVDVLSESAGEVGGYKEIIASINGTGVFARLKFESGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P   + ++IEI   D RIDT RASGAGGQHVNTTDSA
Sbjct: 183 VQRVPETESGGRVHTSAATVAVLP-EAEDVDIEIRNEDIRIDTMRASGAGGQHVNTTDSA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTGVVV    E+SQH+N+A A   LR +LY++E QK ++     +S K ++G G
Sbjct: 242 VRITHIPTGVVVLST-EKSQHQNRANAMKELRTRLYDMERQKVDQER--ADSRKGQVGSG 298

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
               +IR+Y   P   V D R N+       ++ G+ LD+ + A +   +
Sbjct: 299 DRSERIRTYNF-PQGRVSDHRINLTLYKLDKMIAGEGLDEMLDALITDHQ 347


>gi|283783535|ref|YP_003374289.1| peptide chain release factor 1 [Gardnerella vaginalis 409-05]
 gi|283441331|gb|ADB13797.1| peptide chain release factor 1 [Gardnerella vaginalis 409-05]
          Length = 365

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 165/345 (47%), Gaps = 16/345 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +    + ++   P +  N    + L R    L + ++     +    D     E+A ++ 
Sbjct: 17  EEYRDIESRMGSPEVASNPDAIRKLGRRHAELGSIVNAYLNYKQLCDDFEAANEMASDDP 76

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D +   +  +       E        +     D+ D  +E+ AG GG E+  +A  LLRM
Sbjct: 77  DFAEEAKRLEEQIPAAKEKLRTAL--IPRDPDDARDMIMEIKAGTGGEEAALFAGDLLRM 134

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193
           Y R+AEKR + T     +  E  G+K   L I            +  +K E GVHR+ RI
Sbjct: 135 YMRYAEKRGWTTVIQSENSTELGGVKDVQLAIRAKGTPAPEDGVWASMKYEGGVHRVQRI 194

Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
              +S  R  TS + + V+P   +D  EIEI   D +ID + +SG GGQ VNTT SAVR+
Sbjct: 195 PVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRM 254

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309
           THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++  +E A   +   +++      
Sbjct: 255 THIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLDRS 312

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +IR+Y   P   + D RTN +  +   VLDGDL   + + +   
Sbjct: 313 ERIRTYNF-PENRIVDHRTNYKAYNLDQVLDGDLQPVIDSDIQAD 356


>gi|148238741|ref|YP_001224128.1| peptide chain release factor 1 [Synechococcus sp. WH 7803]
 gi|166223613|sp|A5GIR6|RF1_SYNPW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|147847280|emb|CAK22831.1| Peptide chain release factor 1 [Synechococcus sp. WH 7803]
          Length = 365

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 102/348 (29%), Positives = 164/348 (47%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + A      L  +  DP +  +    + + RER  L+  ++    +Q    +     EL
Sbjct: 10  LEAARSSFHNLERQLADPDVASDPTRLQSIARERSRLEPLVNDYASLQAVQSEREQAREL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130
             +      +   +               E L          D     LE+ AGAGG E+
Sbjct: 70  LRDSRGDEEMAHLAQLELDELDIRHEALIERLTLALLPRDPRDERSVMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R++ +R +  + +   + +  G K   L +KG + +  LK E GVHR+
Sbjct: 130 CLWAGDLARMYERFSSRRGWTVQPVSASEADLGGFKELILSVKGESVFSELKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +E++I  +D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADPVEVQIEPADLEISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H P+G+ V C QERSQ +N+ +A  +LRAKLY  E Q  E  A    + + ++G G 
Sbjct: 249 DLMHRPSGIRVFCTQERSQLQNRERAMEILRAKLY--ERQLAEANARESSARRAQVGTGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R     +    VL G ++D + A +A ++
Sbjct: 307 RSEKIRTYNAKD-NRVTDHRLGRNFS-LDPVLQGQMEDVIGACIAEEQ 352


>gi|50914205|ref|YP_060177.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS10394]
 gi|61214586|sp|Q5XC69|RF1_STRP6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|50903279|gb|AAT86994.1| Bacterial Peptide Chain Release Factor 1 [Streptococcus pyogenes
           MGAS10394]
          Length = 359

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 95/348 (27%), Positives = 162/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  +       E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQTISDAEEM 66

Query: 76  ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +      L+E +    +      +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ +G G 
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G +++ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMNEVIDALVMYDQ 350


>gi|297243816|ref|ZP_06927746.1| protein chain release factor A [Gardnerella vaginalis AMD]
 gi|296888237|gb|EFH26979.1| protein chain release factor A [Gardnerella vaginalis AMD]
          Length = 365

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 165/345 (47%), Gaps = 16/345 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +    + ++   P +  N    + L R    L + ++     +    D     E+A ++ 
Sbjct: 17  EEYRDIESRMGSPEVASNPDAIRKLGRRHAELGSIVNAYLNYKQLCDDFEAANEMASDDP 76

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D +   +  +       E        +     D+ D  +E+ AG GG E+  +A  LLRM
Sbjct: 77  DFAEEAKRLEEQLPAAKEKLRTAL--IPRDPDDACDMIMEIKAGTGGEEAALFAGDLLRM 134

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193
           Y R+AEKR + T     +  E  G+K   L I            +  +K E GVHR+ RI
Sbjct: 135 YMRYAEKRGWTTVIQSENSTELGGVKDVQLAIRAKGTPAPEDGVWASMKYEGGVHRVQRI 194

Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
              +S  R  TS + + V+P   +D  EIEI   D +ID + +SG GGQ VNTT SAVR+
Sbjct: 195 PVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRM 254

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309
           THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++  +E A   +   +++      
Sbjct: 255 THIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLDRS 312

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +IR+Y   P   + D RTN +  +   VLDGDL   + + +   
Sbjct: 313 ERIRTYNF-PENRIVDHRTNYKAYNLDQVLDGDLQPVIDSDIQAD 356


>gi|42521715|ref|NP_967095.1| peptide chain release factor RF-1 [Bdellovibrio bacteriovorus
           HD100]
 gi|61214632|sp|Q6MRK9|RF1_BDEBA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|39574245|emb|CAE77749.1| peptide chain release factor RF-1 [Bdellovibrio bacteriovorus
           HD100]
          Length = 357

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 99/348 (28%), Positives = 172/348 (49%), Gaps = 12/348 (3%)

Query: 13  LF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F   D    R   +N   + P +  N  + + LM+E  +L+  +   ++ + +  +   
Sbjct: 1   MFSKLDAVESRYEEVNMALQRPDIASNQTQYRALMKELGNLEKIVLVYRDYRKKTENLKA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
             EL   E D  + +   + ++ ++ E+   +       +     D  +  LE+ AGAGG
Sbjct: 61  SKELLTAEQDAEMRELIREEVKELEAELPDLEQQLKIALIPKDPNDDKNTILEIRAGAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A+ L R Y  +A  + +K E +   +G   G K     I G + +  +K E GV
Sbjct: 121 DEAALFADELFRGYVHYASTQGWKVEMISFSEGNAGGAKEIIASITGDSVFSKMKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS  ++ V P V+ S    I  SD RI+T R+ G+GGQ VN T+
Sbjct: 181 HRVQRVPKTEAAGRIHTSTVTVAVIPEVEVSEIK-IPMSDVRIETMRSQGSGGQSVNRTE 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+ H+PTG+ V+CQ+ +SQ  N+ +A+ +L AKL ++E +K  + A+       +IG
Sbjct: 240 SAVRVVHLPTGIDVKCQEGKSQSTNRERAFQILYAKLQQIEDEKARKEASDVRLE--QIG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            G    +IR+Y   P   + D R  +       V+ G  +  +   +A
Sbjct: 298 TGDRSERIRTYNF-PQTRITDHRIGLTIHQLDQVMSGSFELLIDPLIA 344


>gi|213691478|ref|YP_002322064.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|254790863|sp|B7GP74|RF1_BIFLI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|213522939|gb|ACJ51686.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|320457551|dbj|BAJ68172.1| peptide chain release factor [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 362

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 103/345 (29%), Positives = 162/345 (46%), Gaps = 16/345 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +    +  +   P +  N  + + L R    L   +   K       D     E+A E+ 
Sbjct: 14  EEYQSIEEQMASPEVVSNPDKLRKLGRRHAELGAIVGAYKTWLQVKDDLAAAQEMAGEDA 73

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D +   +  +       E        +     D+ D  +E+ AG GG E+  +A  LLRM
Sbjct: 74  DFAEEAKRLEAELPGVEEKLRTAL--IPRDPDDARDTIMEIKAGTGGEEAALFAGDLLRM 131

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193
           YTR+AEKR +       +  E  G+K   + I            +  +K E GVHR+ RI
Sbjct: 132 YTRYAEKRGWSVNVQSENTTELGGVKDVQIAIRAKGTPAPEDGVWASMKYEGGVHRVQRI 191

Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
              +S  R  TS + + V+P   +D  EIEI   D +ID + +SG GGQ VNTT SAVR+
Sbjct: 192 PVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRM 251

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309
           TH+PTG+ V  Q E+SQ +N+A A  +L+++L  L ++  +E A   +   +++      
Sbjct: 252 THLPTGITVNMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLDRS 309

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +IR+Y   P   + D RTN +  +   VLDGDL   + + +   
Sbjct: 310 ERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 353


>gi|284032945|ref|YP_003382876.1| peptide chain release factor 1 [Kribbella flavida DSM 17836]
 gi|283812238|gb|ADB34077.1| peptide chain release factor 1 [Kribbella flavida DSM 17836]
          Length = 359

 Score =  206 bits (524), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 111/349 (31%), Positives = 169/349 (48%), Gaps = 17/349 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+         + L  +  DP L  +   A+ + +    L   +    E      D   
Sbjct: 1   MFEAVQTLKAEYADLERQMSDPELHSDQANARRVGKRYAALAPVVRTYDEWLQTADDIEA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EL    +D +   E      R +   E  +   +     D  DA LE+ AG GG ES 
Sbjct: 61  AKEL--AAEDPAFADEAVKLEARREELTEKLRLLLVPRDAGDDKDAILEIKAGEGGDESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGE 184
            +A  LL+MY ++AE + +KTE L+  + +  G KS T+ +        G   Y  LK E
Sbjct: 119 LFAGDLLKMYLKFAETQNWKTEVLDSAESDLGGYKSITVAVKAKGTPEPGEAPYAKLKFE 178

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS + + V P   + +++EI  +D RID +R+SG GGQ VN
Sbjct: 179 GGVHRVQRVPVTESQGRIHTSAAGVLVLP-EAEDVDVEIDPNDLRIDVFRSSGPGGQSVN 237

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRITH+PTG+VV  Q E+SQ +N+ QA  +LR++L  L   +        ++ ++
Sbjct: 238 TTDSAVRITHLPTGIVVSMQNEKSQLQNREQAMRVLRSRL--LAAAQEAADQEASDARRS 295

Query: 305 EI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +I       +IR+Y   P     D R   +  +   VL GDL   ++A 
Sbjct: 296 QIRTVDRSERIRTYNF-PENRFSDHRVGYKAHNLDQVLGGDLAPVIQAL 343


>gi|310816145|ref|YP_003964109.1| peptide chain release factor 1 [Ketogulonicigenium vulgare Y25]
 gi|308754880|gb|ADO42809.1| peptide chain release factor 1 [Ketogulonicigenium vulgare Y25]
          Length = 352

 Score =  206 bits (524), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 116/341 (34%), Positives = 172/341 (50%), Gaps = 12/341 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R  FL  K +      +  E   L RE   L   +  +   Q    D     E 
Sbjct: 7   LAQLTDRFQFLEAKMQSG---LSGAEIAALGREYSELKPVVDTLARYQALEADLASAEEW 63

Query: 76  ALEEDDCSILQETSD-NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D  +  +E                Q   L    AD   A LE+  G GG E+  +A
Sbjct: 64  LADPDMRAFAEEELPRLRTAFAEAEIEMQKALLPRDAADGRPAMLEIRPGTGGDEASLFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R++E + ++ E +E  + E  GIK   + I+G   +  +K E GVHR+ R+ 
Sbjct: 124 ADLLRMYQRYSESKGWRFEIIEEAETELGGIKEVVVRIEGEGVFARMKYESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   ++++IEI+  D RIDT RASGAGGQHVNTTDSAVRITH
Sbjct: 184 ETESGGRIHTSAATVAVLP-EAEAVDIEINPGDIRIDTMRASGAGGQHVNTTDSAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG++V    ++SQH+N+  A ++LRA+LY++E  + +         K ++G G    +
Sbjct: 243 LPTGIIVTSS-QKSQHRNRELAMDVLRARLYDMERSRVD--GARSADRKAQVGSGDRSER 299

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       +L GDLD+ + A +A
Sbjct: 300 IRTYNF-PQGRMTDHRINMTLYRLDQILQGDLDEIVDALVA 339


>gi|325971906|ref|YP_004248097.1| peptide chain release factor 1 [Spirochaeta sp. Buddy]
 gi|324027144|gb|ADY13903.1| Peptide chain release factor 1 [Spirochaeta sp. Buddy]
          Length = 354

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 111/342 (32%), Positives = 185/342 (54%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                ++L+ ++ K   P   Q++   K L +ER HL   I  ++ +       +   +L
Sbjct: 5   LPEYEKQLADIDEKLSRPETMQDMKLYKSLNQERSHLAPIIDQLQLMHSLQTQIIGAHQL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
             EE D  +L+ T + L  ++ E+E  + ++          +  D  +E+ AG GG E+ 
Sbjct: 65  MKEETDQEMLEMTREELHELENELEVCEKKTKMLLIPPDPLEGKDIIMEIRAGTGGEEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+ +A+++ +K E L  ++    G K   + I G + YG L+ E GVHR+ 
Sbjct: 125 LFAANLFRMYSHYADEKGWKMEILSSNETGIGGYKELVISISGKDVYGSLRWESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P  +++    I + D +ID  RA G GGQ VNTTDSAVR
Sbjct: 185 RVPETESGGRIHTSAVTVAVLPEAEETDIE-IRQEDLKIDVMRAGGPGGQCVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV CQ E+SQ KN+A+A  +LR++L++LE  K+       E+ K+++G G  
Sbjct: 244 LTHLPTGLVVICQDEKSQIKNRAKALRVLRSRLFDLEEDKKNRER--AEARKSQVGSGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   + D R N+       +++G LD+ ++  
Sbjct: 302 SERIRTYNF-PQNRLTDHRINLTLYKLELIMEGQLDEVVEGL 342


>gi|325963840|ref|YP_004241746.1| bacterial peptide chain release factor 1 (bRF-1) [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323469927|gb|ADX73612.1| bacterial peptide chain release factor 1 (bRF-1) [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 357

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 104/352 (29%), Positives = 174/352 (49%), Gaps = 15/352 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+     +     +  +  DP ++ +   A+ L R    L+  +    + +    D   
Sbjct: 1   MFESVQGLLDEHDAIQAQLGDPAVYADQRLARKLGRRSAQLNGIVEAYHKWEGIRDDLAA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E+    +D     E  +    ++      +   +     D+ +  LEV  G GG E+ 
Sbjct: 61  AKEM--ASEDPEFAAEVPELEASLEEAAAKLRRLLIPRDPDDARNVILEVKGGEGGDEAA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI------KGPNAYGWLKGEQ 185
            +A  LLRMYTR+AE R +KTE +   + +  G K   + +           Y  LK E 
Sbjct: 119 LFAGDLLRMYTRYAESRGWKTEIISATESDLGGYKDVQVAVKGNSNDPAEGVYARLKFEG 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS + + V P VD+  E+EI+++D +ID YR+SG GGQ VNT
Sbjct: 179 GVHRVQRVPVTESQGRIHTSAAGVLVLPEVDEPEELEINQNDLKIDVYRSSGPGGQSVNT 238

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PTG+VV  Q E+SQ +N+     +LRA++   + ++ +         K++
Sbjct: 239 TDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARILAHQQEQIDAEN--SAQRKSQ 296

Query: 306 I---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           I       +IR+Y   P   + D RT  +  +   V++GDL+  +++ + + 
Sbjct: 297 IRTMDRSERIRTYNY-PENRIADHRTGYKAYNLDQVMNGDLEPVIQSAIEMD 347


>gi|291457338|ref|ZP_06596728.1| peptide chain release factor 1 [Bifidobacterium breve DSM 20213]
 gi|291381173|gb|EFE88691.1| peptide chain release factor 1 [Bifidobacterium breve DSM 20213]
          Length = 362

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 103/345 (29%), Positives = 163/345 (47%), Gaps = 16/345 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +    +  +   P +  N  + + L R    L   +   K       D     E+A E+ 
Sbjct: 14  EEYQSIEEQMASPEVVSNPDKLRKLGRRHAELGAIVGAYKAWLQLKDDLEAAQEMAGEDA 73

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D +   +  ++      E        +     D+ D  +E+ AG GG E+  +A  LLRM
Sbjct: 74  DFAEEAKRLESELPGAEEKLRTAL--IPRDPDDARDTIMEIKAGTGGEEAALFAGDLLRM 131

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193
           YTR+AEKR +       +  E  G+K   + I            +  +K E GVHR+ RI
Sbjct: 132 YTRYAEKRGWSVNIQSENTTELGGVKDVQIAIRAKGTPAPEDGVWASMKYEGGVHRVQRI 191

Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
              +S  R  TS + + V+P   +D  EIEI   D +ID + +SG GGQ VNTT SAVR+
Sbjct: 192 PVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRM 251

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309
           TH+PTG+ V  Q E+SQ +N+A A  +L+++L  L ++  +E A   +   +++      
Sbjct: 252 THLPTGITVNMQDEKSQIQNRASALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLDRS 309

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +IR+Y   P   + D RTN +  +   VLDGDL   + + +   
Sbjct: 310 ERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 353


>gi|19746088|ref|NP_607224.1| peptide chain release factor 1 [Streptococcus pyogenes MGAS8232]
 gi|24418636|sp|Q8P125|RF1_STRP8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|19748260|gb|AAL97723.1| putative peptide chain release factor 1 [Streptococcus pyogenes
           MGAS8232]
          Length = 359

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 96/348 (27%), Positives = 163/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  +       E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQTISDAEEM 66

Query: 76  ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +      L+E +    +      +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I + D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDQKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ +G G 
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDIILSGKMDEVIDALVMYDQ 350


>gi|291276374|ref|YP_003516146.1| peptide chain release factor 1 [Helicobacter mustelae 12198]
 gi|290963568|emb|CBG39400.1| peptide chain release factor 1 [Helicobacter mustelae 12198]
          Length = 352

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 106/340 (31%), Positives = 176/340 (51%), Gaps = 10/340 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            ++R   +     DP +  ++     L +E+  +       K     L     L +L LE
Sbjct: 9   IIKRHDEITALLVDPAITSDIKALTNLSKEQSEIQEITQQTKAYMATLDTIRDLEDLILE 68

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTESQDWANM 136
           +   + + +    + R + +   +  ++LL  +  +   + YLE+ AG GG E+  +   
Sbjct: 69  DKALAGMAKEELEVLRERAKNLEESIKTLLIPKDPNDGKNIYLELRAGTGGDEAGIFVGD 128

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L R Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+   
Sbjct: 129 LFRAYCRYADLKKWKVEIISSSENNVGGYKEIIALIKGEGVYSRLKFESGTHRVQRVPAT 188

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS  ++ + P   D +E+ ++ SD RI+ +RA G GGQ VNTTDSAVRITHIP
Sbjct: 189 ESQGRIHTSAITVALMP-EVDEVEVVLNPSDLRIEVFRAGGHGGQCVNTTDSAVRITHIP 247

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+ V  Q E+SQHKNK +A  +LR+++Y+ ++++++      ++ K ++G G    +IR
Sbjct: 248 TGINVSIQDEKSQHKNKEKALKILRSRIYDAQMEQQQ--VQNAQTRKNQVGSGDRSERIR 305

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           +Y   P   + D R  +   S  +V+  G+LD  +    A
Sbjct: 306 TYNY-PQNRLTDHRIGLTLYSLEEVMLSGNLDPIIDPLTA 344


>gi|186681801|ref|YP_001864997.1| peptide chain release factor 2 [Nostoc punctiforme PCC 73102]
 gi|186464253|gb|ACC80054.1| peptide chain release factor 2 [Nostoc punctiforme PCC 73102]
          Length = 289

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 128/255 (50%), Positives = 175/255 (68%)

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
           +  + + LLSG  D+  A L + AGAGGT++QDWA ML+RMYTRW E   +K    E  +
Sbjct: 26  DQWELQQLLSGPYDAEGAVLTISAGAGGTDAQDWAFMLMRMYTRWGEAHGYKVTLAEESE 85

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
           G+EAGIKSATL I G  AYG+L+ E G HRLVRISP+++N +R TSF+ + V P +D+S+
Sbjct: 86  GDEAGIKSATLEITGRYAYGYLRSEMGTHRLVRISPFNANGKRQTSFAGVEVMPQIDNSV 145

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           ++EI + D  I T R+ G GGQ+VN  ++AVRI HIPTG+ V+C +ERSQ +NK +A N 
Sbjct: 146 QLEIPDKDLEITTTRSGGKGGQNVNKVETAVRIVHIPTGLAVRCTEERSQLQNKEKALNR 205

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           L+AKL  +  ++R +          E  WG QIR+YV  PYQMVKDLRTN E T+  DV+
Sbjct: 206 LKAKLLVIAKEQRAQEIAEIRGDMVEASWGNQIRNYVFHPYQMVKDLRTNTETTAIGDVM 265

Query: 340 DGDLDDFMKATLAIK 354
           +G+LD F++A L  +
Sbjct: 266 NGELDPFIQAYLRQE 280


>gi|23466257|ref|NP_696860.1| peptide chain release factor 1 [Bifidobacterium longum NCC2705]
 gi|227546609|ref|ZP_03976658.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|239621640|ref|ZP_04664671.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|312134004|ref|YP_004001343.1| prfa [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482079|ref|ZP_07941103.1| peptide chain release factor 1 [Bifidobacterium sp. 12_1_47BFAA]
 gi|322689793|ref|YP_004209527.1| peptide chain release factor [Bifidobacterium longum subsp.
           infantis 157F]
 gi|322691739|ref|YP_004221309.1| peptide chain release factor [Bifidobacterium longum subsp. longum
           JCM 1217]
 gi|81753501|sp|Q8G3P5|RF1_BIFLO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|23327005|gb|AAN25496.1| peptide chain release factor 1 [Bifidobacterium longum NCC2705]
 gi|227212926|gb|EEI80805.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|239515515|gb|EEQ55382.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|291516325|emb|CBK69941.1| bacterial peptide chain release factor 1 (bRF-1) [Bifidobacterium
           longum subsp. longum F8]
 gi|311773307|gb|ADQ02795.1| PrfA [Bifidobacterium longum subsp. longum BBMN68]
 gi|316916438|gb|EFV37836.1| peptide chain release factor 1 [Bifidobacterium sp. 12_1_47BFAA]
 gi|320456595|dbj|BAJ67217.1| peptide chain release factor [Bifidobacterium longum subsp. longum
           JCM 1217]
 gi|320461129|dbj|BAJ71749.1| peptide chain release factor [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 362

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 103/345 (29%), Positives = 163/345 (47%), Gaps = 16/345 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +    +  +   P +  N  + + L R    L   +   K       D     E+A E+ 
Sbjct: 14  EEYQSIEEQMASPEVVSNPDKLRKLGRRHAELGAIVGAYKAWLQVKDDLAAAQEMAGEDA 73

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D +   +  ++      E        +     D+ D  +E+ AG GG E+  +A  LLRM
Sbjct: 74  DFAEEAKRLEDELPGVEEKLRTAL--IPRDPDDARDTIMEIKAGTGGEEAALFAGDLLRM 131

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193
           YTR+AEKR +       +  E  G+K   + I            +  +K E GVHR+ RI
Sbjct: 132 YTRYAEKRGWSVNVQSENTTELGGVKDVQIAIRAKGTPAPEDGVWASMKYEGGVHRVQRI 191

Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
              +S  R  TS + + V+P   +D  EIEI   D +ID + +SG GGQ VNTT SAVR+
Sbjct: 192 PVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRM 251

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309
           TH+PTG+ V  Q E+SQ +N+A A  +L+++L  L ++  +E A   +   +++      
Sbjct: 252 THLPTGITVNMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLDRS 309

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +IR+Y   P   + D RTN +  +   VLDGDL   + + +   
Sbjct: 310 ERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 353


>gi|255324516|ref|ZP_05365633.1| peptide chain release factor 1 [Corynebacterium tuberculostearicum
           SK141]
 gi|255298422|gb|EET77722.1| peptide chain release factor 1 [Corynebacterium tuberculostearicum
           SK141]
          Length = 358

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 177/346 (51%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V     +  +  DP +  +  + + L +    L   I    E+     D     E+
Sbjct: 8   VDDIVSEYQGIEMQMADPEVAGDQKQFRKLSKRYAELRPIIMVNDELTQAREDLADAKEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D    +E     + ++   E          E DS D  +E+ AGAGG E+  +A 
Sbjct: 68  --AYEDHDFQEEADRLEKSVENLEEKLADLLAPRDEQDSEDIIMEIKAGAGGEEAALFAG 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190
            L RMY R+A+K  F  E L +++ +  G+K  T+  +        A+   K E GVHR+
Sbjct: 126 DLARMYERYADKTGFNWEVLGLNESDLGGVKDMTISFRSKSPSRDGAWSVFKFEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R  TS + + VYP  ++   + I + D R+D YR+SG GGQ VNTTDSAV
Sbjct: 186 QRVPVTESQGRIQTSAAGVLVYPEPEEVESVNIDDKDIRVDVYRSSGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG++V CQ+ERSQ +NKA+A  +L+A+L ++E + RE  A    +S+   +   
Sbjct: 246 RITHLPTGLIVTCQKERSQIQNKARALQVLQARLDQMEREAREAEAGEQRASQVRTMDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R   +  +   VL+GD++D +KA    ++
Sbjct: 306 ERIRTYNW-PENRITDHRIGYKANNLDSVLNGDMNDLIKALQDQER 350


>gi|169833220|ref|YP_001694464.1| peptide chain release factor 1 [Streptococcus pneumoniae
           Hungary19A-6]
 gi|238688292|sp|B1IBH9|RF1_STRPI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|168995722|gb|ACA36334.1| peptide chain release factor 1 [Streptococcus pneumoniae
           Hungary19A-6]
          Length = 359

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 99/348 (28%), Positives = 160/348 (45%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + +   +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTRRFMELSKEEASNRDTVIAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E       +    QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ M A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVMDALVLYDQ 350


>gi|149204050|ref|ZP_01881018.1| peptide chain release factor 1 [Roseovarius sp. TM1035]
 gi|149142492|gb|EDM30537.1| peptide chain release factor 1 [Roseovarius sp. TM1035]
          Length = 417

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 111/341 (32%), Positives = 173/341 (50%), Gaps = 14/341 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               V+R  ++  +        ++     L RE   L   +  I+  +  + D      +
Sbjct: 76  LQQIVERFDYVEAQMMQGG--GDIAR---LGREYSELRPVVEEIRAYRLAVNDLDGARAM 130

Query: 76  ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +      +E +    R+    +  Q   L   EAD+  A LE+  G GG E+  + 
Sbjct: 131 LADPEMRDLAREEVAVLEARLPEMEQRLQLALLPRDEADARPAILEIRPGTGGEEAALFG 190

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L+RMY R++E R +  E +E    E  GI+   + I G   +  LK E GVHR+ R+ 
Sbjct: 191 ADLMRMYQRYSEARGWSFEVIEEQQSELGGIRELVVRIGGEGVFARLKFESGVHRVQRVP 250

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++I+I+ +D RIDT R+SGAGGQHVNTTDSAVRITH
Sbjct: 251 ETESGGRIHTSAATVAVLP-EAEDVDIQINANDLRIDTMRSSGAGGQHVNTTDSAVRITH 309

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV    E+SQH+N+  A  +L+ +LY+LE  + +       +   ++G G    +
Sbjct: 310 LPTGIVVTSS-EKSQHRNREIAMQVLKTRLYDLERNRVDSER--SANRAAQVGSGDRSER 366

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       VL GDLD+ + A  A
Sbjct: 367 IRTYNF-PQGRMTDHRINLTLYKLEQVLGGDLDEVIDALTA 406


>gi|328947853|ref|YP_004365190.1| peptide chain release factor 1 [Treponema succinifaciens DSM 2489]
 gi|328448177|gb|AEB13893.1| Peptide chain release factor 1 [Treponema succinifaciens DSM 2489]
          Length = 361

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 111/342 (32%), Positives = 170/342 (49%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   R + ++    D  L ++  + K  MRE Q L   +S   E +  L        L
Sbjct: 7   LEDLSVRYTVVSELIGDASLIKDQKKYKETMREHQQLTELMSLYDEYKKILKGIEDATVL 66

Query: 76  ALEEDDCSI----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE+D  +     +E  +  ++     E  + + +     D  +  LE+ + AGG E+ 
Sbjct: 67  ITEEEDRDMKELAREELKELEEKKPKLEEEIKLKLIPPDPLDEKNIILEIRSAAGGDEAS 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L  MY   AE++ +KTE +E  + E  G       I G   YG L+ E GVHR+ 
Sbjct: 127 LFVRDLWEMYMHLAERKGWKTETMEAQETEVGGFNKIVTSIAGKFVYGTLRWESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R  TS  ++ V P  +++    I   D R+D  RA G GGQ VNTTDSAVR
Sbjct: 187 RVPATESQGRLQTSTVTVAVLPEAEETEIQ-IRPEDVRVDVMRAGGPGGQCVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+VV  Q E+SQHKNK +A+ +LRA+L++LE  KR+         K  +G G  
Sbjct: 246 LTHIPTGIVVIQQDEKSQHKNKDKAFRVLRARLFDLEESKRQSERADA--RKNMVGSGAR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   V D R N+   +    + G++D+ + A 
Sbjct: 304 SEKIRTYNF-PQDRVTDHRINLSLHNLPSFMMGNMDEMLDAL 344


>gi|149369846|ref|ZP_01889697.1| peptide chain release factor 1 [unidentified eubacterium SCB49]
 gi|149356337|gb|EDM44893.1| peptide chain release factor 1 [unidentified eubacterium SCB49]
          Length = 358

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 100/342 (29%), Positives = 175/342 (51%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72
                 R   ++     P +  +  +   L +E + L+  +   +      + + +   +
Sbjct: 5   LQIVKNRFDEVSDLIIQPDVISDQKQYISLTKEYKDLNALMKKREAYIMATEHIAEAEEI 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L    + D   + +   D  +       E  +   +     D+ +A +E+ AG GG E+ 
Sbjct: 65  LADGSDADMVEMAKMQMDEAKSNIAVLEEEIKLMLIPKDPEDAKNAVMEIKAGTGGDEAS 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYT++ E + +KT  ++  +G   G K+  + ++G + YG LK E GVHR+ 
Sbjct: 125 IFAGDLHRMYTKYCESKGWKTSVVDFSEGTSGGYKAIQMEVEGDDVYGTLKFEAGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V+P  ++     I   D RID + +SG GGQ VNTT SAVR
Sbjct: 185 RVPQTETQGRVHTSAATVMVFPEAEEFDV-HIEMKDVRIDYFCSSGPGGQSVNTTYSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +TH+PTG+V QCQ ++SQHKNK +A+ +LR++LY+LEL K++    +     +++  G +
Sbjct: 244 LTHVPTGLVAQCQDQKSQHKNKEKAFKVLRSRLYDLELAKKQAEDALKRG--SQVTSGDR 301

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              IR+Y       V D R N+     S+++DGD+   +   
Sbjct: 302 SAKIRTYNYS-QGRVTDHRINLTLYDLSNIIDGDIQKIIDEL 342


>gi|300789609|ref|YP_003769900.1| peptide chain release factor RF-1 [Amycolatopsis mediterranei U32]
 gi|299799123|gb|ADJ49498.1| peptide chain release factor RF-1 [Amycolatopsis mediterranei U32]
          Length = 356

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 112/346 (32%), Positives = 172/346 (49%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               +   + L T+  DP +  +   A+ L R    L   +  + ++     D     E+
Sbjct: 6   LKGLLAEHAELETQLADPAVHADQARARKLGRRYAELTPVVRAVHDLDTVRDDLAATREM 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E+ + +   E              +          D +D  +E+ +G GG ES  +A 
Sbjct: 66  ASEDAEFAAEAEELAARIPDLESRLTELLL--PRDPYDGSDVVMEIKSGEGGEESALFAG 123

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190
            LLRMY R+AE+  +K E L+  D +  G K  TL IK         +  LK E GVHR+
Sbjct: 124 DLLRMYLRYAERHGWKAEVLDSVDSDLGGFKDVTLSIKSKAAAVDGVWSRLKFEGGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS S + +Y    + +E+EI  +D RID +R+SG GGQ VNTTDSAV
Sbjct: 184 QRVPATESQGRIHTSASGVLIY-PEPEEVEVEIDPNDLRIDVFRSSGPGGQSVNTTDSAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG+VV CQ E+SQ +N+A+A  +L+A+L  +  ++    A+    S+   +   
Sbjct: 243 RITHLPTGIVVSCQNEKSQIQNRARALQVLQARLQAVAEEEAAAKASDARRSQVRTVDRS 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            ++R+Y   P   + D R N +  +   VLDGDLD  + A     +
Sbjct: 303 ERVRTYNF-PENRISDHRVNYKAYNLDQVLDGDLDGVLDALATADR 347


>gi|291334339|gb|ADD93998.1| peptide chain release factor 1 [uncultured marine bacterium
           MedDCM-OCT-S11-C310]
          Length = 355

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 104/342 (30%), Positives = 174/342 (50%), Gaps = 12/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLIL 72
                 R   LN    DP +  +    + + +E + ++  +      ++++ ++ DN  L
Sbjct: 5   LAEVEARYEELNRLLADPVVLSDQNRLRDVAKEHREVEELVEIYRSYRQLETQIQDNKEL 64

Query: 73  LELALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +    + +      +E  +    ++   +      +     D  +  LE+ AG GG E+ 
Sbjct: 65  IADGEDPELTELAKEELPELETELQNLTDKINVLLMPKDPNDDKNVLLEIRAGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+R+AE+  ++ + + + +G + G+K   + ++    +  +K E GVHR+ 
Sbjct: 125 LFAGDLFRMYSRYAERSGWRVDVMSMSEGTQGGVKEVIVWLRA-TTFFCVKYESGVHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ V P  +++    I   D RIDTYR+ GAGGQHVNTTDSAVR
Sbjct: 184 RVPATESQGRIHTSAATVAVMPEAEEAEID-IRNEDLRIDTYRSQGAGGQHVNTTDSAVR 242

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VVQCQ E+SQ KN+A+A  +L ++L +   QK  E A      K  +  G  
Sbjct: 243 ITHLPTGMVVQCQDEKSQIKNRAKAMKVLSSRLLDFIRQK--EAAERAAERKELVRTGDR 300

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   + D R      +   VL GDL+  + A 
Sbjct: 301 SEKIRTYNF-PQDRITDHRIGFSAHNLPAVLQGDLEAVLIAL 341


>gi|254821298|ref|ZP_05226299.1| peptide chain release factor 1 [Mycobacterium intracellulare ATCC
           13950]
          Length = 357

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 114/332 (34%), Positives = 165/332 (49%), Gaps = 9/332 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L  +  DP L  N  EA+   R    L   +   +++     D     EL
Sbjct: 8   IDVLLAEHADLERRLADPELHSNPDEARKAGRRFARLAPIVGTYRKLMAAREDLEAAREL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A ++D  +      ++                     D++D  LEV +G GG ES  +A 
Sbjct: 68  AADDDSFAAEASDLESRVAELDTQLTDML--APRDPHDADDIVLEVKSGEGGEESALFAA 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-----KGPNAYGWLKGEQGVHRL 190
            L RMY R+AE+  +    L+    +  G K ATL I          +  +K E GVHR+
Sbjct: 126 DLARMYIRYAERHGWTVTVLDETTSDLGGYKDATLSIASKGDSADGVWSRMKFEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + VYP  ++  E++I ESD RID YR+SG GGQ VNTTDSAV
Sbjct: 186 QRVPVTESQGRVHTSAAGVLVYPEPEEIGEVQIDESDLRIDVYRSSGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG+VV CQ ERSQ +NKA+A  +L A+L  L  ++    A+   +S+   +   
Sbjct: 246 RITHLPTGIVVTCQNERSQLQNKARALQVLAARLQSLAEEQALADASADRASQIRTVDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
            +IR+Y   P   + D R N +  +   VLDG
Sbjct: 306 ERIRTYNF-PENRIADHRINFKSHNLDQVLDG 336


>gi|298252617|ref|ZP_06976411.1| protein chain release factor A [Gardnerella vaginalis 5-1]
 gi|297532981|gb|EFH71865.1| protein chain release factor A [Gardnerella vaginalis 5-1]
          Length = 366

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 165/345 (47%), Gaps = 16/345 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +    + ++   P +  N    + L R    L + ++     +    D     E+A ++ 
Sbjct: 18  EEYRDIESRMGSPEVASNPDAIRKLGRRHAELGSIVNAYLNYKQLCDDFEAANEMASDDP 77

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D +   +  +       E        +     D+ D  +E+ AG GG E+  +A  LLRM
Sbjct: 78  DFAEEAKRLEEQIPAAKEKLRTAL--IPRDPDDARDMIMEIKAGTGGEEAALFAGDLLRM 135

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193
           Y R+AEKR + T     +  E  G+K   L I            +  +K E GVHR+ RI
Sbjct: 136 YMRYAEKRGWTTVIQSENSTELGGVKDVQLAIRAKGTPAPEDGVWASMKYEGGVHRVQRI 195

Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
              +S  R  TS + + V+P   +D  EIEI   D +ID + +SG GGQ VNTT SAVR+
Sbjct: 196 PVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRM 255

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309
           THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++  +E A   +   +++      
Sbjct: 256 THIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLDRS 313

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +IR+Y   P   + D RTN +  +   VLDGDL   + + +   
Sbjct: 314 ERIRTYNF-PENRIVDHRTNYKAYNLDQVLDGDLQPVIDSDIQAD 357


>gi|326335566|ref|ZP_08201753.1| peptide chain release factor RF1 [Capnocytophaga sp. oral taxon 338
           str. F0234]
 gi|325692332|gb|EGD34284.1| peptide chain release factor RF1 [Capnocytophaga sp. oral taxon 338
           str. F0234]
          Length = 366

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 96/346 (27%), Positives = 170/346 (49%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   QR   ++     P++  +      L +E + L   +   +E      +     E+
Sbjct: 14  LDIVKQRFDEVSDLIIQPNIIADQKRYVQLTKEYKELKQLMDKREEYIVITGNIAEAEEI 73

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +  D  +++     L+  K  +   +    F  +     DS +A +E+ AG GG E+ 
Sbjct: 74  IKDGSDAEMVEMAHLQLEEAKERLPQLEEEIKFLLIPKDPEDSKNAVMEIRAGTGGDEAS 133

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++ + + +    +++++G   G K   L I G + YG LK E GVHR+ 
Sbjct: 134 IFAGDLYRMYSKYCQDKGWSVSVMDMNEGTSGGFKEIILEINGEDVYGTLKFEAGVHRVQ 193

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P  ++     ++  D +I    ++G GGQ VNTT SA++
Sbjct: 194 RVPQTETQGRVHTSAATVIVLPEAEEFDVE-LNMEDVKIIRTTSTGPGGQSVNTTYSAIQ 252

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           + HIPTG+ V+CQ E+SQHKN  +A  +LR++LYE+EL K+ E        K+ +  G +
Sbjct: 253 LQHIPTGIEVRCQDEKSQHKNLDKALKVLRSRLYEMELAKKME--ADSARRKSMVSSGDR 310

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              IR+Y   P   V D R  +      ++++GD+   +      +
Sbjct: 311 SAKIRTYNY-PQGRVTDHRIGLTLYDLGNIINGDIQRLIDELQLAE 355


>gi|220913097|ref|YP_002488406.1| peptide chain release factor 1 [Arthrobacter chlorophenolicus A6]
 gi|254790860|sp|B8HB03|RF1_ARTCA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219859975|gb|ACL40317.1| peptide chain release factor 1 [Arthrobacter chlorophenolicus A6]
          Length = 357

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 106/352 (30%), Positives = 175/352 (49%), Gaps = 15/352 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+     +     +  +  DP ++ +   A+ L R    L+  +      +    D   
Sbjct: 1   MFESVQGLLDEHDSIQAQLGDPAVYADQRLARKLGRRSAQLNGIVEAYHRWEGLRDDLSA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E+    +D     E  +    ++      +   +     D+ +  LEV  G GG E+ 
Sbjct: 61  AREM--AAEDPEFAAEVPELEASLETAAAKLRRLLIPRDPDDARNVILEVKGGEGGDEAA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI------KGPNAYGWLKGEQ 185
            +A  LLRMYTR+AE R +KTE +   + +  G K   + +           Y  LK E 
Sbjct: 119 LFAGDLLRMYTRYAESRGWKTEIISATESDLGGYKDVQVAVKGSSNDPAEGVYARLKFEG 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS + + V P VD+  E+EI+++D +ID YR+SG GGQ VNT
Sbjct: 179 GVHRVQRVPVTESQGRIHTSAAGVLVLPEVDEPEELEINQNDLKIDVYRSSGPGGQSVNT 238

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PTG+VV  Q E+SQ +N+     +LRA++   + ++ +  A   E  K++
Sbjct: 239 TDSAVRITHLPTGIVVAMQNEKSQLQNREAGMRVLRARILAHQQEQID--AANSEQRKSQ 296

Query: 306 I---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           I       +IR+Y   P   + D RT  +  +   V++GDL+  +++ + + 
Sbjct: 297 IRTMDRSERIRTYNY-PENRIADHRTGYKAYNLDQVMNGDLEPVIQSAIEMD 347


>gi|146318502|ref|YP_001198214.1| peptide chain release factor 1 [Streptococcus suis 05ZYH33]
 gi|146320693|ref|YP_001200404.1| peptide chain release factor 1 [Streptococcus suis 98HAH33]
 gi|145689308|gb|ABP89814.1| Protein chain release factor A [Streptococcus suis 05ZYH33]
 gi|145691499|gb|ABP92004.1| Protein chain release factor A [Streptococcus suis 98HAH33]
 gi|292558283|gb|ADE31284.1| Peptide chain release factor 1 [Streptococcus suis GZ1]
          Length = 364

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 96/348 (27%), Positives = 164/348 (47%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 12  LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEATTRDTVTAYREYKTVLQNIVDAEEM 71

Query: 76  ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E    + L+E +    +      +   E  +   L     D  +  LE+   AGG E+
Sbjct: 72  IKESSGDADLEEMAKEELKQAKADKEAYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 131

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 132 ALFAGDLLTMYQKYAEGQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 191

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ + P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 192 QRVPVTESQGRVHTSTATVLIMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 250

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 251 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 308

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 309 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVVDALVLYDQ 355


>gi|319404588|emb|CBI78194.1| peptide chain release factor 1 [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 359

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 119/348 (34%), Positives = 181/348 (52%), Gaps = 18/348 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               +R   + ++  + P    N      L  E   L   I+ I+ +     +   L  +
Sbjct: 10  KQLEKRFKIIESQMAENP----NAETYVKLASEYAELQPIIAPIRTLNSLHKEIAELETI 65

Query: 76  ALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  +        Q+I+   +  Q   L    AD     +E+ AG GG+E+
Sbjct: 66  ISDTQTDTEMRNLAQEELSSLSQKIQELEQELQILLLPKDIADEKSVIIEIRAGTGGSEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A    +K E + + DGE  G K     I G   +  LK E GVHR+
Sbjct: 126 ALFAGNLFRMYERYANTHNWKVEIISLSDGEVGGYKEIIATISGKGVFSKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            RI   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 186 QRIPETETGGRIHTSAATVAVLP-EAEEIDIEIRPEDIRIDTMRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+L+++E QK    +    S KT++G G 
Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQK--AESERSASRKTQVGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       +++GDL++ + A ++  +
Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLYKLDRIMEGDLNELINALISDHQ 348


>gi|313886616|ref|ZP_07820328.1| peptidyl-tRNA hydrolase domain protein [Porphyromonas
           asaccharolytica PR426713P-I]
 gi|312923912|gb|EFR34709.1| peptidyl-tRNA hydrolase domain protein [Porphyromonas
           asaccharolytica PR426713P-I]
          Length = 328

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 129/321 (40%), Positives = 195/321 (60%), Gaps = 11/321 (3%)

Query: 41  EAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE 100
            A+  MR    + + I   + +     +  +  +     ++    Q+  D   R    VE
Sbjct: 3   RAQQQMRRVGEIRSWIEAFEAVDAATQEVALAYDFYK--EEAVEEQDVDDAYARAIKLVE 60

Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
             +  ++LS E D   A L+++AGAGGTESQDWA+ML+RMY RWAE+  +K       DG
Sbjct: 61  DLELRNMLSAEEDRLGAVLKINAGAGGTESQDWASMLVRMYQRWAERSGYKVTITNWQDG 120

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220
           ++AGIK+ T+ I+G  AYG+LK E GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE
Sbjct: 121 DDAGIKTVTMQIEGELAYGFLKSENGVHRLVRVSPYNAQGKRMTSFASVFVVPLVDDSIE 180

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG--------VVVQCQQERSQHKN 272
           +E++      DT+R+SGAGGQ+VN  ++ VR+ +  T         +V++  + RSQ  N
Sbjct: 181 VEVNPGLLSWDTFRSSGAGGQNVNKVETGVRLHYQYTDPDTGETEEIVIENTETRSQMDN 240

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
           +  A  +LR++LY+ EL++R    +  E++K +I WG QIRSYV    + VKD RT  + 
Sbjct: 241 RENALRLLRSQLYDKELERRRAAQSEVEANKKKIEWGSQIRSYVFDD-RRVKDHRTGYQT 299

Query: 333 TSPSDVLDGDLDDFMKATLAI 353
           +  + V+DGDLD F+KA L  
Sbjct: 300 SDVNGVMDGDLDAFIKAYLMQ 320


>gi|228477589|ref|ZP_04062222.1| peptide chain release factor 1 [Streptococcus salivarius SK126]
 gi|228250733|gb|EEK09931.1| peptide chain release factor 1 [Streptococcus salivarius SK126]
          Length = 359

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 99/348 (28%), Positives = 162/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  +       E+
Sbjct: 7   LQAVEDRYEELGELLSDPEVVSDTKRFMELSREEANTRETVTAYREYKQVIQSISDAEEM 66

Query: 76  ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E      L+E +    +      +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKEASGDPDLEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLAMYQKYAETQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E EI   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ +G G 
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKLDEVVDALVLYDQ 350


>gi|152991659|ref|YP_001357380.1| peptide chain release factor 1 [Sulfurovum sp. NBC37-1]
 gi|166223612|sp|A6Q6B4|RF1_SULNB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|151423520|dbj|BAF71023.1| peptide chain release factor 1 [Sulfurovum sp. NBC37-1]
          Length = 355

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 108/341 (31%), Positives = 177/341 (51%), Gaps = 9/341 (2%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           + R + ++     P +  ++     L +E+  L   +       +         EL  +E
Sbjct: 10  IDRYNEISELLSSPDIASDINRMTELSKEQSGLAPLVEKANLYIETADAIAENKELLSDE 69

Query: 80  DDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +   + +E    L+ +     E  +   +   + D  + +LE+ AGAGG ES  +   + 
Sbjct: 70  ELGDLAKEELSELEPMLPKLEEEIKILMIPKDKNDDKNIFLELRAGAGGDESALFVADVF 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY+R+AE+  +K E +  +DG   G K     IKG   Y  LK E G HR+ R+   ++
Sbjct: 130 RMYSRYAEQMGWKVEIVSTNDGTAGGYKELIAEIKGQGVYSQLKYEAGTHRVQRVPDTET 189

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS  ++ V P   D +E++I  ++ ++D YR+SG GGQ VNTTDSAVR+THIPTG
Sbjct: 190 QGRVHTSAITVAVIP-EVDDVEVDIKPNEVKMDVYRSSGCGGQSVNTTDSAVRLTHIPTG 248

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315
           +VV  Q E+SQHKN+ +A  +L+A++YE ELQK+ +        K ++G G    +IR+Y
Sbjct: 249 IVVAIQDEKSQHKNRDKAMKVLKARVYESELQKQLDE--TAGQRKLQVGSGDRSEKIRTY 306

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
              P   + D R  +   +  DV+ +G+L   +   +A  +
Sbjct: 307 NY-PQNRLTDHRIGLTLYALDDVMNNGNLKLVIDPLIAHAQ 346


>gi|326332906|ref|ZP_08199163.1| peptide chain release factor 1 [Nocardioidaceae bacterium Broad-1]
 gi|325949264|gb|EGD41347.1| peptide chain release factor 1 [Nocardioidaceae bacterium Broad-1]
          Length = 359

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 119/351 (33%), Positives = 179/351 (50%), Gaps = 16/351 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++    L  +  +P    +   AK L +    L + I   +  Q    D     EL
Sbjct: 7   VEGLIEEHEGLEKRLAEPETHADARLAKKLNQRYAELSSIIDAYRSWQQLGDDIEAAREL 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D +  +E    + + +   E  +   +     D  DA LEV +G GG ES  +A 
Sbjct: 67  --AGEDPAFAEEAEALVPQREAAEERLRRLLVPRDPTDDKDAILEVKSGEGGEESALFAG 124

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVH 188
            LLRMYTR+AE++ +K E L+  + +  G KS T+ +        G   Y  LK E GVH
Sbjct: 125 DLLRMYTRYAERQGWKLEFLDATESDLGGYKSVTVAVKAKGNPEPGRAPYALLKFEGGVH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V P   + +++EI+++D RID YR+SG GGQ VNTTDS
Sbjct: 185 RVQRVPVTESQGRVHTSAAGVLVVP-EAEPVDVEINDNDLRIDVYRSSGPGGQSVNTTDS 243

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307
           AVRITHIPTG+VV  Q E+SQ +NK QA  +LR++L +      +  A+    S+   + 
Sbjct: 244 AVRITHIPTGIVVSMQNEKSQLQNKEQAMRVLRSRLLQAAQDAADAEASDARRSQVRTVD 303

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM----KATLAIK 354
              +IR+Y   P   + D RT  +  +   VLDGDL+  +     A LA +
Sbjct: 304 RSERIRTYNF-PENRISDHRTGYKSYNLDQVLDGDLEPVIGSAVDADLAAR 353


>gi|253751628|ref|YP_003024769.1| peptide chain release factor 1 [Streptococcus suis SC84]
 gi|253753530|ref|YP_003026671.1| peptide chain release factor 1 [Streptococcus suis P1/7]
 gi|253755645|ref|YP_003028785.1| peptide chain release factor 1 [Streptococcus suis BM407]
 gi|251815917|emb|CAZ51531.1| peptide chain release factor 1 [Streptococcus suis SC84]
 gi|251818109|emb|CAZ55903.1| peptide chain release factor 1 [Streptococcus suis BM407]
 gi|251819776|emb|CAR45680.1| peptide chain release factor 1 [Streptococcus suis P1/7]
 gi|319758066|gb|ADV70008.1| peptide chain release factor 1 [Streptococcus suis JS14]
          Length = 359

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 96/348 (27%), Positives = 164/348 (47%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEATTRDTVTAYREYKTVLQNIVDAEEM 66

Query: 76  ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E    + L+E +    +      +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKESSGDADLEEMAKEELKQAKADKEAYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEGQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ + P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLIMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVVDALVLYDQ 350


>gi|258652312|ref|YP_003201468.1| peptide chain release factor 1 [Nakamurella multipartita DSM 44233]
 gi|258555537|gb|ACV78479.1| peptide chain release factor 1 [Nakamurella multipartita DSM 44233]
          Length = 361

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 117/346 (33%), Positives = 172/346 (49%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V     L  K  DP +  +   ++ L R    L   ++  +++     D     EL
Sbjct: 9   VDALVAEYEDLQVKLSDPAVHADQAVSRKLGRRYAELTPIVTTARDLAATRGDLQAAQEL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
             E+   +    T         +   +          D  D  +EV AG GG ES  +A 
Sbjct: 69  GAEDAGFAEEARTLAGRVDELEQRLSELL--APRDPDDGKDVLVEVKAGEGGEESALFAG 126

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP-----NAYGWLKGEQGVHRL 190
            LLRMY R+AE+R +KTE L   + +  G K  T+ +K P       +  LK E GVHR+
Sbjct: 127 DLLRMYLRYAERRGWKTEVLSATESDLGGYKDVTVAVKSPAATPDGVWARLKFEGGVHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + ++V P V+D  ++EI+++D RID +R+SG GGQ VNTTDSAV
Sbjct: 187 QRVPVTESQGRVHTSAAGVFVAPEVEDVNDVEIADADLRIDVFRSSGPGGQSVNTTDSAV 246

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG+VV CQ E+SQ +NK QA  +LRA++        +  A     S+   +   
Sbjct: 247 RITHLPTGIVVSCQNEKSQLQNKEQAMRILRARMLAAARATADAAAADARRSQVRTVDRS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            ++R+Y   P   + D R   +  +   VLDGDLD  + A  A  +
Sbjct: 307 ERVRTYNY-PENRIADHRVGYKAYNLDAVLDGDLDAVLDALSAADR 351


>gi|297567138|ref|YP_003686110.1| peptide chain release factor 1 [Meiothermus silvanus DSM 9946]
 gi|296851587|gb|ADH64602.1| peptide chain release factor 1 [Meiothermus silvanus DSM 9946]
          Length = 364

 Score =  206 bits (523), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 103/344 (29%), Positives = 168/344 (48%), Gaps = 8/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  Q    L     DP +  +  E + L +    +   ++ I+E +    D      L
Sbjct: 5   LESLEQEYQSLEASLADPAVLSDQREYQRLSKRYAEMGELVATIREYKKAHSDLEEAKSL 64

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +   +   +RI       +   L     D  +  +E+ AG GG E+  +A
Sbjct: 65  LHDPDMAEMARLEVEEIRRRIPELEAKLELLLLPKDPLDDKNVIVEIRAGTGGEEAALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L  M   +A ++ F+TE L+++  +  G+   +  + G  AYG LK E GVHR+ R+ 
Sbjct: 125 AELRDMIMEFARRKGFRTEILDVNLTDLGGVSKVSFEVIGAGAYGVLKYEAGVHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P   + +++E+  +D  I   RASG GGQ VNTTDSAV++ H
Sbjct: 185 ATEAQGRIHTSTATVAVMP-EAEEVDVELDPADLEITVSRASGPGGQGVNTTDSAVQVLH 243

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WGRQ 311
            PTG++V C + RSQ KNK +A  +LR++L  LE+++ EE A   E    +IG      +
Sbjct: 244 KPTGMIVSCMESRSQIKNKEKALTILRSRL--LEMKRAEEAARRREDRLAQIGAGERSEK 301

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R      +   VL GDL +  +A     +
Sbjct: 302 IRTYNF-PQSRVTDHRIGFTTHNLEGVLSGDLFELHEALKRADQ 344


>gi|330994789|ref|ZP_08318711.1| Peptide chain release factor 1 [Gluconacetobacter sp. SXCC-1]
 gi|329758050|gb|EGG74572.1| Peptide chain release factor 1 [Gluconacetobacter sp. SXCC-1]
          Length = 353

 Score =  206 bits (523), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 112/348 (32%), Positives = 171/348 (49%), Gaps = 13/348 (3%)

Query: 14  FD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           FD   D  V R   L     +     +  +A    RE   L+  ++ +  ++        
Sbjct: 4   FDHRLDRIVARCDELQALLAEGLSGADFSQA---SREYAELEPIVARVNALRAAEEAERD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             ++  + +   + Q   D L+          +   L   EAD   A LE+   AGG E+
Sbjct: 61  ASQMLADPEMRELAQAELDALRTQIPTLRHDIRLAMLPRDEADERSAILEIRPAAGGDEA 120

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L   Y R+A+ R ++ E LE    E  G++     I G   +  LK E GVHR+
Sbjct: 121 GLFAAELFGAYQRYADLRGWRFEVLEYDQSELGGLREGIASITGRGVFARLKYESGVHRV 180

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ V P   + +++E++E D RID YRASGAGGQHVN T+SAV
Sbjct: 181 QRVPATESQGRIHTSTVTVAVLP-EAEEVDVEVNEGDLRIDVYRASGAGGQHVNKTESAV 239

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PT +VV  Q+E+SQHKN+A+A  +LRA+LY  E  +           + ++G G 
Sbjct: 240 RITHLPTNIVVAMQEEKSQHKNRAKAMKILRARLY--ERNRAAAHETRAADRRAQVGTGD 297

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       V+ G+LD+F+ A    ++
Sbjct: 298 RSERIRTYNF-PQGRVTDHRIGLTLYKIDRVMAGELDEFVDALTQEEQ 344


>gi|319947033|ref|ZP_08021267.1| peptide chain release factor RF1 [Streptococcus australis ATCC
           700641]
 gi|319747081|gb|EFV99340.1| peptide chain release factor RF1 [Streptococcus australis ATCC
           700641]
          Length = 359

 Score =  206 bits (523), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 101/348 (29%), Positives = 164/348 (47%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDMVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E       +    QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKEAGGDSDLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
           Q +A  LL+MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 QLFAGDLLQMYQKYAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D RID Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EIEEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|50954441|ref|YP_061729.1| peptide chain release factor 1 [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|61214606|sp|Q6AG71|RF1_LEIXX RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|50950923|gb|AAT88624.1| peptide chain release factor 1 [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 358

 Score =  206 bits (523), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 113/352 (32%), Positives = 172/352 (48%), Gaps = 15/352 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD     +     L  +  DP L  + + +K + R    L   ++   E +    D   
Sbjct: 1   MFDSVTGLIAEHDDLQQQLSDPELHSDPVRSKKVNRRYAELSRIVAAYTEWKQLTDDLEA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             ELA E+D  +      +     +   E  +   +     DS DA +E+  G GG ES 
Sbjct: 61  ARELAAEDDAFAAEIPGLEQGL--EESEEKLRRLLIPRDPNDSRDAIMEIKMGEGGAESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI------KGPNAYGWLKGEQ 185
            +A  LL MY  +A+ R++K E +E    +  GIK   +             +  LK E 
Sbjct: 119 LFAGDLLSMYLHYADSRRWKAEIIEQTSSDLGGIKDVQVAFKGSSSDPAEGVWAHLKYEG 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS + + V+P VD+  E+EI+ +D +ID +R+SG GGQ VNT
Sbjct: 179 GVHRVQRVPATESQGRIHTSAAGVLVFPEVDEPEEVEINPNDLKIDVFRSSGPGGQSVNT 238

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH PTG+VV  Q E+SQ +N+  A  +LRA+L  L  Q+ E  A   E  K +
Sbjct: 239 TDSAVRITHAPTGIVVSMQNEKSQLQNREAAMRVLRARL--LAKQQEEADAEAAEFRKGQ 296

Query: 306 I---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           I       +IR+Y   P   + D RT  +  +   V++G L   +++ +   
Sbjct: 297 IRTMERSERIRTYNF-PENRIADHRTGYKAYNLDAVMNGALGPVIESCILAD 347


>gi|260906196|ref|ZP_05914518.1| peptide chain release factor 1 [Brevibacterium linens BL2]
          Length = 359

 Score =  206 bits (523), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 113/341 (33%), Positives = 167/341 (48%), Gaps = 6/341 (1%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             +   + L ++  DP +  +   AK L R    LD      +       D     ELA 
Sbjct: 13  ALLDEHARLQSELSDPAVHADAGRAKKLTRRYAELDKVAVTARHFAQLEEDAAAAEELAD 72

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           ++ +     +                   + S   D+ DA +E+ AG GG ES  +A  L
Sbjct: 73  DDAEFGAEAKRLHAEAADVETELRDLL--VPSDPDDARDAIIEIKAGEGGDESALFAGDL 130

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL--LIKGPNAYGWLKGEQGVHRLVRISP 195
           LRMY RW + R + ++ L+    +  G K  TL    K   AYGW+K E GVHR+ R+  
Sbjct: 131 LRMYQRWIDSRGWSSQILDATHSDLGGYKDVTLALKAKDDGAYGWVKFEGGVHRVQRVPV 190

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS + + V+P VD+  E+ + ++D RID YR+SG GGQ VNTTDSAVRITH+
Sbjct: 191 TESQGRIHTSAAGVLVFPEVDEPEEVALDDNDLRIDVYRSSGPGGQSVNTTDSAVRITHV 250

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRS 314
           PTG+   CQ E+SQ +NK  A  MLRA++   + ++    A     S+   +    +IR+
Sbjct: 251 PTGITASCQNEKSQLQNKEAALRMLRARILAKQAEEAAAEAADIRRSQVRTVDRSERIRT 310

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           Y   P   + D RT  +  +   VL G+LD  + +     K
Sbjct: 311 YNF-PENRITDHRTGYKAYNLDQVLAGELDPVIGSCREADK 350


>gi|297626232|ref|YP_003687995.1| peptide chain release factor 1 (RF-1) [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
 gi|296921997|emb|CBL56559.1| Peptide chain release factor 1 (RF-1) [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
          Length = 359

 Score =  206 bits (523), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 112/349 (32%), Positives = 168/349 (48%), Gaps = 11/349 (3%)

Query: 13  LFDWDN-AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+      Q  + L  +  DP +  +   ++ + R    L   +  + E Q    D   
Sbjct: 1   MFESAQGLRQEFADLEKQLADPAVVSDQARSRKVGRRYSELTGVVHALDEHQQLTEDLSA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             ELA ++   +   +            +            DSNDA +E+ +G GG ES 
Sbjct: 61  ARELADDDPAFAAEADQISARLD--EVTDKLTALLAPRDPLDSNDAIMEIKSGEGGEESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQG 186
            +A  LL MY  +AE+  + TE ++    +  G KS TL  +         YG LK E G
Sbjct: 119 LFAGDLLNMYQHFAEREGWSTEIIDAEPTDLGGFKSVTLAFRATGHDAQAPYGALKFEGG 178

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS + + V P V++S    I+  D RID YR++G GGQ VNTT
Sbjct: 179 VHRVQRVPVTESQGRIHTSAAGVLVMPDVEESEIE-INPDDLRIDVYRSTGKGGQGVNTT 237

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE- 305
           DSAVRITH+PTGVVV  Q +RSQ +NK QA  +LRA+L     ++  + A     S+   
Sbjct: 238 DSAVRITHLPTGVVVTSQDQRSQLQNKEQALRVLRARLVAAAEEQAAQQAEQARKSQVRT 297

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +    +IR+Y   P   + D R   +  +   VL G+L+  ++A  A  
Sbjct: 298 VDRSERIRTYNF-PENRITDHRIGFKAHNLDAVLGGELEPLIEALQAAD 345


>gi|262340849|ref|YP_003283704.1| peptide chain release factor 2 [Blattabacterium sp. (Blattella
           germanica) str. Bge]
 gi|262272186|gb|ACY40094.1| peptide chain release factor 2 [Blattabacterium sp. (Blattella
           germanica) str. Bge]
          Length = 365

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 136/353 (38%), Positives = 225/353 (63%), Gaps = 3/353 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S +++ +  +   D     L     +  +P+ W++  ++K  +R    +  +I    ++
Sbjct: 10  ISEKIHRMHDVLKIDQIKAILDKEQNQILNPNFWKDYKKSKDSIRSLHEMKTSIKDFMKL 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L +  I+        + ++ +E      +    +   +F++LLS + DS +A L++ 
Sbjct: 70  KNALEELEIIFSF---SKEENLEKELEIQFHKTMKLLSNIEFKNLLSEKEDSLNAILQIS 126

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTES DW +ML+RMY  WAEK  F  + +    G+  GIKS TL I G  A+G+LK
Sbjct: 127 SGAGGTESCDWTSMLMRMYFMWAEKHNFSVKKINFISGDITGIKSVTLEIDGIYAFGYLK 186

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRL+RISP+DSNS+RHTSFSS++VYP+++D+I+I+I  SD + +T+R+SGAGGQ+
Sbjct: 187 GENGVHRLIRISPFDSNSKRHTSFSSVYVYPMINDNIDIDIKTSDIQWETFRSSGAGGQN 246

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  ++ VR+ H PTG+ ++  + RSQ +N+ +A  +L+++L+E+E+ K+ E     +S 
Sbjct: 247 VNKVETGVRLRHHPTGITIENTESRSQMQNRQKALLLLKSRLFEIEMIKKNEKKEKIKSE 306

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           K +I WG QIR+Y++ PY++VKDLRT  + T    V+DG++D F+K  L  KK
Sbjct: 307 KKKIEWGSQIRNYIMHPYKLVKDLRTGYQTTQIQSVMDGEIDTFLKKFLMYKK 359


>gi|296121187|ref|YP_003628965.1| peptide chain release factor 1 [Planctomyces limnophilus DSM 3776]
 gi|296013527|gb|ADG66766.1| peptide chain release factor 1 [Planctomyces limnophilus DSM 3776]
          Length = 363

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 108/347 (31%), Positives = 168/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               + R   L  + +DP +  +V +   + RE   L    S ++E      D L    +
Sbjct: 9   LQAKLARFEELEAQLQDPEVLADVSKMLEIQREHGGLSKIASTVREFNTLQDDLLAAETM 68

Query: 76  ALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E  D    +           R +      +               +E+ AG GG E+ 
Sbjct: 69  LAEATDDETKEIAQAEIDELKPRFEPLKTELEDMVTAGDSLTRGSLIMEIRAGTGGDEAA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MYTR+ + + +K E +E+   E  G+K   + I G  AY  L+ E G HR+ 
Sbjct: 129 LFARDLYEMYTRYVDLQGWKYEVMELTTSELGGLKEVVITITGSGAYHRLQFESGGHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V       I++EI + D RIDT RA G GGQ VN T+SAVR
Sbjct: 189 RVPETETQGRVHTSAATVAVMA-EASEIDVEIRDEDLRIDTMRAGGPGGQKVNKTESAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIP+G+VV+ Q E+SQHKNKA+A  +LR++L   EL++ +  A   E  +T +G G  
Sbjct: 248 ITHIPSGLVVRIQDEKSQHKNKAKALRVLRSRLM--ELRESQAHAVRAEQRRTLVGSGDR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R  +       ++ G+LD+ +   LA  +
Sbjct: 306 SERIRTYNF-PQNRLTDHRIGLTVYKLDQIMQGNLDELINPILAFDR 351


>gi|271963194|ref|YP_003337390.1| peptide chain release factor 1 [Streptosporangium roseum DSM 43021]
 gi|270506369|gb|ACZ84647.1| peptide chain release factor 1 [Streptosporangium roseum DSM 43021]
          Length = 350

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 114/347 (32%), Positives = 173/347 (49%), Gaps = 12/347 (3%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            + D  +   + L  K  DP +  +  +A+   R    L   I+  +E++    D     
Sbjct: 1   MNLDELLSEYAELELKLADPTVHAHPAQARTFGRRYAELTPIITTYRELEGVQNDLDTAR 60

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ELA E++  +   +  +       +        +     D  D  +E+ AG GG ES  +
Sbjct: 61  ELASEDEAFAEEAKELEGRVPELEDKLRHLL--IPRDPNDDKDIIMEIKAGEGGEESALF 118

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK---GPNAYGWLKGEQGVHRL 190
           A  LLRMY R+AE+  +KTE ++    +  G K  T+ +K       +  LK E GVHR+
Sbjct: 119 AGDLLRMYLRYAERVGWKTELIDATHSDLGGYKDVTVALKARGDEGVWSRLKFEGGVHRV 178

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + VYP   + +++++  +D RID YR+SG GGQ VNTTDSAV
Sbjct: 179 QRVPVTESQGRIHTSAAGVLVYP-EAEEVDVQVDPNDLRIDVYRSSGPGGQSVNTTDSAV 237

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307
           RITHIPTGVV  CQ E+SQ +NK  A  +LRA+L  +     E  A      K++I    
Sbjct: 238 RITHIPTGVVASCQNEKSQLQNKESAMRILRARLQAIAE--EEANAAAMAERKSQIRTVD 295

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +IR+Y   P   + D R   +  +   VLDGDL   +++ L  +
Sbjct: 296 RSERIRTYNF-PENRISDHRVGFKAYNLDQVLDGDLTAVIQSLLDAE 341


>gi|312139166|ref|YP_004006502.1| peptide chain release factor 1 prfa [Rhodococcus equi 103S]
 gi|325673529|ref|ZP_08153220.1| peptide chain release factor RF1 [Rhodococcus equi ATCC 33707]
 gi|311888505|emb|CBH47817.1| peptide chain release factor 1 PrfA [Rhodococcus equi 103S]
 gi|325555550|gb|EGD25221.1| peptide chain release factor RF1 [Rhodococcus equi ATCC 33707]
          Length = 359

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 110/346 (31%), Positives = 172/346 (49%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +   + L  +  DP L  +   A+   +    L   ++   +++    D     EL
Sbjct: 10  IDDILAEHAGLEQQLADPALHNDPSAARKAGKRFAELAPVMATYAKLKSAQDDLDAAREL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A ++   +      +       +              D +D  LE+ +G GG ES  +A+
Sbjct: 70  AADDAAFAAEIPALEETVTELDKTLTDLL--APRDPHDGDDVVLELKSGEGGEESALFAS 127

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190
            L RMY R+AE+  ++ E L+    +  G K AT+ IK         +  LK E GVHR+
Sbjct: 128 DLARMYVRYAERAGWRVEILDATVSDLGGYKDATISIKSKGDVRDGVWSRLKFEGGVHRV 187

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + +YP  ++  E++I E+D RID YR+SG GGQ VNTTDSAV
Sbjct: 188 QRVPVTESQGRVHTSAAGVLIYPEPEEVEEVQIDETDLRIDVYRSSGKGGQGVNTTDSAV 247

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG+VV CQ ERSQ +NKA+A  +L A+L     +  +  A+ G  S+   +   
Sbjct: 248 RITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQAAAEEAADAEASAGRQSQVRTVDRS 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R   +  +   VLDGD++  + A     +
Sbjct: 308 ERIRTYNF-PENRITDHRIGFKAHNLDAVLDGDMEALLDALGKADR 352


>gi|260911915|ref|ZP_05918480.1| peptide chain release factor RF1 [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260633938|gb|EEX52063.1| peptide chain release factor RF1 [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 370

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 92/350 (26%), Positives = 152/350 (43%), Gaps = 19/350 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   ++T   DP +  +      L RE + L + ++  K     L       ++
Sbjct: 11  LDGLESRYEEVSTLITDPAVIADQERYVKLTREYKDLGDIMNARKRYVACLNSIAEAKDI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +     + L   + E    +       +     D+ +  +E+ AG GG E+ 
Sbjct: 71  LANETDAEMKDMAREELSTNEAERPKLEEEIKLLLVPKDPEDAKNVQMEIRAGTGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY R+ + + +        +G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 LFAGDLFGMYKRYCDSKGWNLSVTASSEGAVGGFKEIDFAVSGDNVYGILKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P  D      I+E D + DT+R+SGAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRMHTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKVESGVR 249

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +            ++++C + R Q KNK +A + LR  +Y+ E QK   + +I    K
Sbjct: 250 LRYPWKNPNTGETEEILIECTETRDQPKNKERALSRLRTFIYDREHQKY--VDDIANRRK 307

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           + +  G +   IR+Y   P   V D R           + GD+   + A 
Sbjct: 308 SLVSTGDRSAKIRTYNY-PQGRVTDHRIGYTTHDLQGFIGGDIQAMIDAL 356


>gi|119025459|ref|YP_909304.1| peptide chain release factor 1 [Bifidobacterium adolescentis ATCC
           15703]
 gi|154486885|ref|ZP_02028292.1| hypothetical protein BIFADO_00718 [Bifidobacterium adolescentis
           L2-32]
 gi|229470348|sp|A1A0I9|RF1_BIFAA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118765043|dbj|BAF39222.1| peptide chain release factor 1 [Bifidobacterium adolescentis ATCC
           15703]
 gi|154084748|gb|EDN83793.1| hypothetical protein BIFADO_00718 [Bifidobacterium adolescentis
           L2-32]
          Length = 362

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 162/345 (46%), Gaps = 16/345 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +    +  +  +P +  N  + + L R    L   +S     +    D     E+    +
Sbjct: 14  EEYHNIEQQMAEPEVASNPDKMRKLGRRHAELGAIVSAYTAYKQVKDDLEAAREM--ASE 71

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D    +E       +    E  +   +     D+ D  +E+ AG GG E+  +A  LLRM
Sbjct: 72  DPDFAEEAKRLEGELPAAEEKLRTALIPRDPDDARDTIMEIKAGTGGEEAALFAGDLLRM 131

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193
           Y R+AEKR +       +  E  G+K   L I            +  LK E GVHR+ RI
Sbjct: 132 YMRYAEKRGWSVTVQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEGGVHRVQRI 191

Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
              +S  R  TS + + V+P   +D  EIEI   D +ID + +SG GGQ VNTT SAVR+
Sbjct: 192 PVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRM 251

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309
           THIPTG+ V  Q E+SQ +N+A A  +L+++L  L ++  +E A   +   +++      
Sbjct: 252 THIPTGITVNMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLDRS 309

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +IR+Y   P   + D RTN +  +   VLDGDL   + + +   
Sbjct: 310 ERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 353


>gi|294673455|ref|YP_003574071.1| peptide chain release factor 1 [Prevotella ruminicola 23]
 gi|294472502|gb|ADE81891.1| peptide chain release factor 1 [Prevotella ruminicola 23]
          Length = 371

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 88/354 (24%), Positives = 154/354 (43%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   ++T   DP +  +      L +E + L + +   K     L       ++
Sbjct: 12  LDGLEARFEEVSTLITDPAVIADQQRFVKLTKEYKDLGDIMDARKRYIACLNGIKEAKDI 71

Query: 76  ALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   +      +      E  +   +     D+ +  +E+ AG GG E+ 
Sbjct: 72  LANETDPEMKEMAREELAINEELQPQLEEEIKIALIPKDPEDAKNVEMEIRAGTGGDEAA 131

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MY  + E + ++     + +G   G K     + G + YG LK E GVHR+ 
Sbjct: 132 LFAGDLFKMYKNYCESKGWQVSITYVSEGAVGGFKEVDFSVTGADVYGTLKYESGVHRVQ 191

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +SN R  TS +++ V P  D      ++E + + DT+R+SGAGGQ+VN  +S VR
Sbjct: 192 RVPVTESNGRMQTSAATVAVLPEADKFEV-HVNEGEIKWDTFRSSGAGGQNVNKVESGVR 250

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + ++           ++++C + R Q KNK +A + L   +Y+ E QK   + +I    K
Sbjct: 251 LRYMWKNPNTGETEEILIECTETRDQPKNKERALSRLYTFIYDKEHQKY--VDDIANRRK 308

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + +  G +   IR+Y   P   V D R           L GD+   + A    +
Sbjct: 309 SLVSTGDRSAKIRTYNF-PQGRVTDHRIGYTTHDLQGFLGGDIQAMIDALTVAE 361


>gi|296454711|ref|YP_003661854.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           longum JDM301]
 gi|296184142|gb|ADH01024.1| peptide chain release factor 1 [Bifidobacterium longum subsp.
           longum JDM301]
          Length = 362

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 103/345 (29%), Positives = 162/345 (46%), Gaps = 16/345 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +    +  +   P +  N  + + L R    L   +   K       D     E+A E+ 
Sbjct: 14  EEYQSIEEQMASPEVVSNPDKLRKLGRRHAELGAIVGAYKTWLQVKDDLAAAQEMAGEDA 73

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D +   +  +       E        +     D+ D  +E+ AG GG E+  +A  LLRM
Sbjct: 74  DFAEEAKRLEAELPDAEEKLRTAL--IPRDPDDARDTIMEIKAGTGGEEAALFAGDLLRM 131

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193
           YTR+AEKR +       +  E  G+K   + I            +  +K E GVHR+ RI
Sbjct: 132 YTRYAEKRGWSVNVQSENTTELGGVKDVQIAIRAKGTPAPEDGVWASMKYEGGVHRVQRI 191

Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
              +S  R  TS + + V+P   +D  EIEI   D +ID + +SG GGQ VNTT SAVR+
Sbjct: 192 PVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRM 251

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309
           TH+PTG+ V  Q E+SQ +N+A A  +L+++L  L ++  +E A   +   +++      
Sbjct: 252 THLPTGITVNMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLDRS 309

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +IR+Y   P   + D RTN +  +   VLDGDL   + + +   
Sbjct: 310 ERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 353


>gi|297568589|ref|YP_003689933.1| peptide chain release factor 1 [Desulfurivibrio alkaliphilus AHT2]
 gi|296924504|gb|ADH85314.1| peptide chain release factor 1 [Desulfurivibrio alkaliphilus AHT2]
          Length = 357

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 112/346 (32%), Positives = 175/346 (50%), Gaps = 12/346 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+   +   R   L  +  DP L Q+    K L +E   +               D   
Sbjct: 1   MFEQLADIKDRKKNLEDRLSDPDLMQDPARFKGLAKEHAQVSKLDDLYARYLKAQHDFAA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
             +L  EE+D  +L         ++  +   + E           D  +  LE+ AG GG
Sbjct: 61  NRQLIEEEEDEEMLALARAENGELRESIAVLEKELRLALLPKDPNDEKNVLLEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +   L RMY+R+AE+  +K E L  +     G K    LI G + Y  LK E GV
Sbjct: 121 DEAALFVADLFRMYSRYAEQLGWKVETLSSNPIGIGGYKEIIALISGEHVYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS  ++ V P   + +E++I+ S+ + D +R+SG GGQ VNTTD
Sbjct: 181 HRVQRVPATETQGRVHTSAVTVAVLP-EAEEVELKINPSELKFDVFRSSGPGGQSVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+VV CQ E+SQHKNKA+A  +LRA+L  L+  ++E+   I    K+++G
Sbjct: 240 SAVRVTHLPTGLVVSCQDEKSQHKNKAKALQVLRARL--LDKLQQEQHDQISSDRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            G    ++R+Y   P   + + R N+      DV+ G LD+ ++  
Sbjct: 298 SGDRSERVRTYNF-PQNRLTEHRINLTIYRLDDVMMGHLDEVVEPL 342


>gi|217977729|ref|YP_002361876.1| peptide chain release factor 1 [Methylocella silvestris BL2]
 gi|254790890|sp|B8EI32|RF1_METSB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|217503105|gb|ACK50514.1| peptide chain release factor 1 [Methylocella silvestris BL2]
          Length = 360

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 108/349 (30%), Positives = 176/349 (50%), Gaps = 16/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  ++R   ++ +  +            L RE   L+   + I++ + ++ +   L  +
Sbjct: 7   LDLILRRYDEVSARLNE---AVEPALYVQLSREFAGLEQVAAAIRDYRSQMQEVEGLAAM 63

Query: 76  ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    S ++  ++   R      +      +   L    AD   A LEV AG GG E+
Sbjct: 64  LADPTTDSEMRGLAEEELRDAKERLEALEHQLKIALLPKDAADERSAILEVRAGTGGDEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+AE + +  E +  ++G   G K     I G   +  LK E G HR+
Sbjct: 124 ALFAGDLFRMYQRYAESKGWSVEIISANEGAAGGFKEIIAEIAGRGVFAKLKFESGAHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P     +++EI+E+D +IDT RA GAGGQHVN T+SA+
Sbjct: 184 QRVPDTETQGRIHTSAATVAVLP-EAQEVDVEINEADLKIDTMRAQGAGGQHVNKTESAI 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG +V  Q ERSQHKN+A+A  +LR+++Y+ + QK +         ++++G G 
Sbjct: 243 RITHIPTGTIVFVQDERSQHKNRARAMALLRSRIYDEQRQKLDAER--AADRRSQVGSGD 300

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V+ G+ LD+ + A     +
Sbjct: 301 RSERIRTYNF-PQGRVTDHRINLTLYKLDKVITGEALDEVIDALTTHHQ 348


>gi|288928094|ref|ZP_06421941.1| peptide chain release factor 1 [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|288330928|gb|EFC69512.1| peptide chain release factor 1 [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 370

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 92/350 (26%), Positives = 153/350 (43%), Gaps = 19/350 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   ++T   DP +  +      L RE + L + ++  K     L       ++
Sbjct: 11  LDGLESRYEEVSTLITDPAVIADQERYVKLTREYKDLGDIMNARKRYVACLNSIAEAKDI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L   + E    +       +     D+ +  +E+ AG GG E+ 
Sbjct: 71  LANESDAEMKEMAREELSANETERPKLEEEIKLLLVPKDPEDAKNVQMEIRAGTGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY R+ + + +        +G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 LFAGDLFGMYKRFCDSKGWNLSVTASSEGAVGGFKEIDFAVSGDNVYGVLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P  D      I+E D + DT+R+SGAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRMHTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKVESGVR 249

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +            ++++C + R Q KNK +A + LR  +Y+ E QK   + +I    K
Sbjct: 250 LRYPWKNPNTGETEEILIECTETRDQPKNKERALSRLRTFIYDREHQKY--VDDIANRRK 307

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           + +  G +   IR+Y   P   V D R           + GD+   + A 
Sbjct: 308 SLVSTGDRSAKIRTYNY-PQGRVTDHRIGYTTHDLQGFIAGDIQAMIDAL 356


>gi|225350887|ref|ZP_03741910.1| hypothetical protein BIFPSEUDO_02461 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158343|gb|EEG71585.1| hypothetical protein BIFPSEUDO_02461 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 362

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 106/345 (30%), Positives = 166/345 (48%), Gaps = 16/345 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +    +  +  +P +  +  + + L R    L   +S     +    D     E+A E+ 
Sbjct: 14  EEYHNIEQQMAEPEVASDPDKMRKLGRRHAELGVIVSAYTAYKQVKDDLEAAKEMASEDP 73

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D +   +  ++      E        +     D+ D  +E+ AG GG E+  +A  LLRM
Sbjct: 74  DFAEEAKRLESELPAVEEKLRTAL--IPRDPDDARDTIMEIKAGTGGEEAALFAGDLLRM 131

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193
           Y R+AEKR +       +  E  G+K   L I            +  LK E GVHR+ RI
Sbjct: 132 YMRYAEKRGWTVTLQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEGGVHRVQRI 191

Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
              +S  R  TS + + V+P   +D  EIEI + D +ID + +SG GGQ VNTT SAVR+
Sbjct: 192 PVTESQGRIQTSAAGVIVFPEADEDDDEIEIDQKDLKIDIFMSSGPGGQSVNTTYSAVRM 251

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309
           THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++  EE A   +   +++      
Sbjct: 252 THIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEEEAAQAADMRHSQVRSLDRS 309

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +IR+Y   P   + D RTN +  +   VLDGDL   + + +   
Sbjct: 310 ERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 353


>gi|312115445|ref|YP_004013041.1| peptide chain release factor 1 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220574|gb|ADP71942.1| peptide chain release factor 1 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 361

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 114/349 (32%), Positives = 179/349 (51%), Gaps = 17/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               V R   +  +  +     +    K L +E   LD  ++ IK ++    +   L ++
Sbjct: 9   LKRLVGRWETIQAQLSEG---CDQETFKKLSKEFSDLDPLVAAIKTLEAAEEERDSLRQM 65

Query: 76  ALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +      + E +         R++      Q   L    AD   A LEV AG GG E+
Sbjct: 66  IEDPAAEPDMAELAREELEAAEPRVEQLEHELQIMLLPKDAADEKSAILEVRAGTGGEEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A+ + +K   L + D +  G +     I G   +  +K E GVHR+
Sbjct: 126 ALFAADLFRMYQRYADLKGWKVNVLSVSDADAGGFREIVASISGKGVFARMKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + +++EI E D RIDT RASGAGGQHVNTTDSAV
Sbjct: 186 QRVPETENQGRIHTSAATVAVLP-EAEEVDVEIREQDIRIDTMRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITHIPTG++V    E+SQH+N+A+A  +LRA+L+++E  + +E        K +IG G 
Sbjct: 245 RITHIPTGIIVTSS-EKSQHQNRARAMQVLRARLFDMERTRIDEAR--AAERKDQIGSGD 301

Query: 311 ---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
              +IR+Y   P   V D R N+   +   +++G+ LD  + A +  ++
Sbjct: 302 RSQRIRTYNF-PQGRVTDHRVNVTLYNLPQIMEGEGLDTIIDALITERQ 349


>gi|150397700|ref|YP_001328167.1| peptide chain release factor 1 [Sinorhizobium medicae WSM419]
 gi|166223607|sp|A6UCF2|RF1_SINMW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|150029215|gb|ABR61332.1| peptide chain release factor 1 [Sinorhizobium medicae WSM419]
          Length = 360

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 174/344 (50%), Gaps = 18/344 (5%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   +  +    P           L  E   L   +S I+  +    +   +  + 
Sbjct: 11  ELERRFGEIEARMSAGPS----ADVYVKLASEYSELQPVVSKIRAYEKATAELADIGAML 66

Query: 77  LEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            +      +++ ++  +       +   +  Q   L    AD   A LE+ AG GG+E+ 
Sbjct: 67  ADRATDKDMRDLAELEKPEIEERVEALEQEIQILLLPKDAADEKSAILEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A  + ++ E L   +GE  G K     + G   +  LK E GVHR+ 
Sbjct: 127 LFAGDLFRMYERYAAGKGWRVEVLSASEGEAGGYKEIIATVSGRGVFSRLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + I+I+I   D R+DT R+SGAGGQHVNTTDSAVR
Sbjct: 187 RVPETEAGGRIHTSAATVAVLP-EAEDIDIDIRSEDIRVDTMRSSGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV    E+SQH+N+A+A  +LR++LY++E Q+    +      + ++G G  
Sbjct: 246 ITHLPTGLVVTSS-EKSQHQNRAKAMQVLRSRLYDMERQR--ADSERSADRRNQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       V++G++D+ + A LA
Sbjct: 303 SERIRTYNF-PQGRLTDHRINLTIYKLDRVMEGEIDEIVDALLA 345


>gi|300088066|ref|YP_003758588.1| peptide chain release factor 1 [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527799|gb|ADJ26267.1| peptide chain release factor 1 [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 356

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 100/351 (28%), Positives = 180/351 (51%), Gaps = 12/351 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D  +   +R   +     DP +  ++     L +ER  ++  I   +  +        
Sbjct: 1   MLDKLEIIERRYLEIEQAIADPSVATDITLLTRLAKERASMEALIGMYRRYKRNEQSLTE 60

Query: 72  LLELALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
             ++   E D  + +   +      Q  +   E  +   L        +  +E+ AG GG
Sbjct: 61  AEQMLETETDEEMRELAKEEVKRLKQEQEELYEQLKIALLPKDPNAERNIIIEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E++ +A  L RMYTR+AE + +K E +++ +      K A   I G + Y  LK E GV
Sbjct: 121 DEAKLFAGDLFRMYTRYAELKGWKVEIIDLTEQSGGTFKEAVFEIDGEDVYSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +++ R HTS +++ V P V + IE++I   D RID Y + GAGGQ+VN   
Sbjct: 181 HRVQRVPVTEASGRIHTSTATVAVMP-VAEDIEVDIKPEDLRIDIYHSGGAGGQNVNKVA 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           +AVR+TH+P+G+VV CQ+ERSQ KN+ +A ++L+A+L  +E +K+++   + ++ + ++G
Sbjct: 240 TAVRMTHLPSGLVVACQEERSQLKNRQKAMSVLKARLLAMEQEKQDKE--MTDNRRAQVG 297

Query: 308 ---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                 +IR+Y   P   + D R  +   +   +++G LDD + A    ++
Sbjct: 298 SADRSEKIRTYNY-PQDRLTDHRIGLSVHNLPKIMEGYLDDIIDALATDEQ 347


>gi|119383645|ref|YP_914701.1| peptide chain release factor 1 [Paracoccus denitrificans PD1222]
 gi|166223583|sp|A1B0G1|RF1_PARDP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119373412|gb|ABL69005.1| bacterial peptide chain release factor 1 (bRF-1) [Paracoccus
           denitrificans PD1222]
          Length = 351

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 109/343 (31%), Positives = 175/343 (51%), Gaps = 14/343 (4%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
             V+R  +L  +    P       E   + RE   L   ++ I + +    D      + 
Sbjct: 9   QIVERFEYLEARLNAGPA----AEEIAAISREYAELKPVVAQIAQWRSVQEDIRQAQAML 64

Query: 77  LEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
            + +       E S     +       +   L    AD+  A LE+  G GG E+  +A 
Sbjct: 65  ADHEMRELAQDELSRLRAGLPALEHALRVALLPRDAADARPAILEIRPGTGGEEAALFAG 124

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            LL MY R+AE + ++ + LE+   +  G++ A   I+G   +  LK E GVHR+ R+  
Sbjct: 125 DLLDMYRRFAESQGWQFQMLELVRSDLGGVREAMARIEGEGVFARLKYESGVHRVQRVPE 184

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS +++ V P   + ++++I  +D RIDT RASGAGGQHVNTTDSAVRITH+
Sbjct: 185 TESGGRIHTSAATVAVLP-EAEEVDVDIPAADIRIDTMRASGAGGQHVNTTDSAVRITHL 243

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           PTG+VV    E+SQH+N+A A  +LRA+LY++E  +    A      K+++G G    +I
Sbjct: 244 PTGIVVTSS-EKSQHQNRANAMAVLRARLYDMERSR--ADAERAADRKSQVGSGDRSERI 300

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R+Y   P   + D R  +   +   ++ G++ + ++A  A  +
Sbjct: 301 RTYNF-PQGRMTDHRIGLTLYALDRIMQGEIGEIVEALAAHDQ 342


>gi|319777684|ref|YP_004137335.1| peptide chain release factor 1 [Mycoplasma fermentans M64]
 gi|318038759|gb|ADV34958.1| Peptide chain release factor 1 [Mycoplasma fermentans M64]
          Length = 358

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 174/347 (50%), Gaps = 6/347 (1%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCD 68
           +F+   +       L  K +D  +  N+ E   + +E   + +      +    Q+   D
Sbjct: 5   MFNSLSDIKNTYDNLVKKLDDHEVINNIKEYTKISKEVNKIKDIAETFTKYLNLQNDYND 64

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
             +++    EE+         +N  ++    E  +   L   E D  +  +E+   AGG 
Sbjct: 65  AKVMINSKNEEEVLFAKSIIEENEVKLAQLEEELKILILPKDENDDKNVIMEIRGAAGGD 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L +MYT++AE   FK + +        G       IKG  AY  LK E GVH
Sbjct: 125 EANIFAGDLFKMYTKFAEDLNFKLKVISSSAASVGGFTQIVFSIKGDKAYSKLKFESGVH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS +++ V P +DDS++IEI   D +IDTYR+SGAGGQ VNTTDS
Sbjct: 185 RVQRVPVTESAGRIHTSTATVTVMPEIDDSVDIEIKPQDLQIDTYRSSGAGGQSVNTTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VV  Q ERSQ  N+  A  +L++KLY+LE+QK+++              
Sbjct: 245 AVRITHLPTGIVVSSQDERSQIANRETALTVLKSKLYDLEIQKKQQEEAGYRKLAGHGDR 304

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R     +    V++G L   ++A L  ++
Sbjct: 305 SEKIRTYNY-PQDRVTDHRIGYSTS-LKQVMEGKLLTIIEALLTEEQ 349


>gi|311740614|ref|ZP_07714441.1| peptide chain release factor RF1 [Corynebacterium pseudogenitalium
           ATCC 33035]
 gi|311304134|gb|EFQ80210.1| peptide chain release factor RF1 [Corynebacterium pseudogenitalium
           ATCC 33035]
          Length = 362

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 177/346 (51%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V     +  +  DP +  +  + + L +    L   I    E+     D     E+
Sbjct: 12  VDDIVSEYQGIEMQMADPEVAGDQKQFRKLSKRYAELRPIIMVNDELTQAREDLADAKEM 71

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D    +E     + ++   E          E DS D  +E+ AGAGG E+  +A 
Sbjct: 72  --AYEDHDFQEEADRLEKSVESLEEKLADLLAPRDEQDSEDIIMEIKAGAGGEEAALFAG 129

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190
            L RMY R+A+K  F  E L +++ +  G+K  T+  +        A+   K E GVHR+
Sbjct: 130 DLARMYERYADKTGFNWEVLGLNESDLGGVKDMTISFRSKSPSRDGAWSVFKFEGGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R  TS + + VYP  ++   + I + D R+D YR+SG GGQ VNTTDSAV
Sbjct: 190 QRVPVTESQGRIQTSAAGVLVYPEPEEVESVNIDDKDIRVDVYRSSGKGGQGVNTTDSAV 249

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG++V CQ+ERSQ +NKA+A  +L+A+L ++E + RE  A    +S+   +   
Sbjct: 250 RITHLPTGLIVTCQKERSQIQNKARALQVLQARLDQMEREAREAEAGEQRASQVRTMDRS 309

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R   +  +   VL+GD++D +KA    ++
Sbjct: 310 ERIRTYNW-PENRITDHRIGYKANNLDSVLNGDMNDLIKALQDQER 354


>gi|282900531|ref|ZP_06308475.1| Peptide chain release factor 2 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281194584|gb|EFA69537.1| Peptide chain release factor 2 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 291

 Score =  205 bits (522), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 132/266 (49%), Positives = 182/266 (68%)

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              + ++  +++  + + LLSG  DS  A L ++AGAGGT++QDWA ML+RMYTRWAE  
Sbjct: 18  ETTINQMHRDLDQWELQQLLSGPYDSQGAVLTINAGAGGTDAQDWAFMLMRMYTRWAEAH 77

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +K    E  +G+EAGIKSATL I G  AYG+L+ E G HRLVRISP+++N +R TSF+ 
Sbjct: 78  GYKVTLAEESEGDEAGIKSATLEITGRYAYGYLRAEMGTHRLVRISPFNANGKRQTSFAG 137

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P +D+S+ +EI E D  I T RA G GGQ+VN  ++AVRI HIPTGV V+C +ERS
Sbjct: 138 VEVMPQIDNSVTLEIPEKDLEITTSRAGGKGGQNVNKVETAVRIVHIPTGVAVRCTEERS 197

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q +NK +A   L+AKL  +  ++R +          E  WG QIR+YV  PYQ+VKDLRT
Sbjct: 198 QLQNKEKALARLKAKLLVIAREQRAQEIAEIRGDMVEASWGNQIRNYVFHPYQIVKDLRT 257

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
           N+E T+  DV++GDLD+F++A L  +
Sbjct: 258 NLETTAIGDVMNGDLDNFIQAYLRQE 283


>gi|159027581|emb|CAO86953.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 366

 Score =  205 bits (522), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 106/348 (30%), Positives = 178/348 (51%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q  + L  +  DP +  N  E   L + R  L+  ++  +  Q    D +   ++
Sbjct: 10  LQSVEQTYTELTRRLADPDVTSNPGELHRLAKSRASLEETVNTYEIWQKSQEDLIGAKQI 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E      L+E +               +      L     D  +  LE+ AG GG E+
Sbjct: 70  FKESASDPELREMAALEVAELEAKIATLEDQLTILLLPRDPLDEKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+R+Y+++AE + +K   L     +  G K A L IKG N Y  LK E GVHR+
Sbjct: 130 SIWAGDLVRLYSKYAETQNWKVSLLSESPADMGGFKEAILEIKGDNVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +++ R HTS +++ + P   D +E+ I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPLTEASGRVHTSTATVAIMP-EVDDVEVHIDPKDIELTTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C +ERSQ +N+ +A  +LRAKLY+++LQ+++E   +    ++++G G 
Sbjct: 249 DLIHKPTGIRVFCTEERSQLQNRERAMQILRAKLYDIKLQEQQE--AVSSMRRSQVGTGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    + D R N E  S   +LDGD++D +++ +A  +
Sbjct: 307 RSEKIRTYNYKD-NRLTDHRLN-ENFSLDRILDGDIEDVIQSCIAKDQ 352


>gi|319760481|ref|YP_004124419.1| peptide chain release factor 1 [Candidatus Blochmannia vafer str.
           BVAF]
 gi|318039195|gb|ADV33745.1| peptide chain release factor 1 [Candidatus Blochmannia vafer str.
           BVAF]
          Length = 360

 Score =  205 bits (522), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 115/337 (34%), Positives = 178/337 (52%), Gaps = 7/337 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             +R   L    E P+  QN  +   + +E  HL + +++ ++  +   + L   E+  +
Sbjct: 13  LQERFYKLKQLIEHPNHIQNNKDFHSISKEYAHLAHIVTYFEQWLNIQKEILHTKEILTD 72

Query: 79  EDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
            D   +  +    L  I+    +  +   L +   D    ++E+ AG GG E+  ++  L
Sbjct: 73  IDLHDLALDELKKLNIIENNLEKKIKILLLPTDPNDKYGCFIELRAGTGGKEAAIFSGEL 132

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMYTR+AE +++  E +    GE  G K     I    AY  LK E G HR+ R+   +
Sbjct: 133 FRMYTRYAETQRWNIEIIHATYGEYGGYKEIIAKISCNGAYNQLKFESGGHRVQRVPYTE 192

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  R HTS  ++ V P + D     I+ +D RIDT+R+SGAGGQHVNTTDSA+RITHIP+
Sbjct: 193 SQGRIHTSTCTVAVIPKIPDIKLPNINPNDLRIDTFRSSGAGGQHVNTTDSAIRITHIPS 252

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314
           G+ V+CQ ERSQHKNK++A ++LR++LY + +++R          +  IG G    +IR+
Sbjct: 253 GLSVECQDERSQHKNKSKALSILRSRLYAMNIKRR--KIEESNFRRNLIGSGDRSDRIRT 310

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           Y  Q    V D R +      SDV+DG L   +K  +
Sbjct: 311 YNFQ-QGRVTDHRIDFTSYKLSDVMDGALGILIKPII 346


>gi|189183642|ref|YP_001937427.1| peptide chain release factor RF-2 [Orientia tsutsugamushi str.
           Ikeda]
 gi|189180413|dbj|BAG40193.1| peptide chain release factor RF-2 [Orientia tsutsugamushi str.
           Ikeda]
          Length = 287

 Score =  205 bits (522), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 159/280 (56%), Positives = 212/280 (75%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +  +A++E+D   +       ++++ E +  Q E L + + D ND +L+++AGAGGTES 
Sbjct: 1   MSNIAIKENDIEFIHNIEQEWKKLQEEAKKLQVECLFTSDVDVNDCFLDINAGAGGTESN 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+M+LRMY R+AE   FKTE + + DGEEAG+KSA++ I G NAYGW K E GVHRLV
Sbjct: 61  DWASMMLRMYLRFAESMNFKTEVVYLLDGEEAGVKSASVKICGHNAYGWFKTESGVHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+++  +R TSF+S WVYPV++D+I++ I + D RIDTYRASGAGGQHVNTTDSA+R
Sbjct: 121 RNSPFNALGKRMTSFASAWVYPVINDNIQVVIEDKDIRIDTYRASGAGGQHVNTTDSAIR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITH PT +VVQCQ +RSQHKNKA+A  ML+AK+YELE +K+ EI N   ++KT+  WG  
Sbjct: 181 ITHFPTKIVVQCQNDRSQHKNKAEAMRMLKAKIYELEQKKQNEIINNHNAAKTDNSWGYH 240

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IRSYVLQPYQ+VKDLRTN+E +    VLDGDL+ F+ A+L
Sbjct: 241 IRSYVLQPYQLVKDLRTNVETSDTKRVLDGDLEKFIYASL 280


>gi|113954440|ref|YP_729638.1| peptide chain release factor 1 [Synechococcus sp. CC9311]
 gi|119361628|sp|Q0ID34|RF1_SYNS3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|113881791|gb|ABI46749.1| peptide chain release factor 1 [Synechococcus sp. CC9311]
          Length = 364

 Score =  205 bits (522), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 102/348 (29%), Positives = 168/348 (48%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + A      L  +  DP +  +    + + RER  L+  +     +Q    + +    L
Sbjct: 10  LEAASSSFHNLERQLADPDVAADPQRLETIARERSRLEPLVLDYTSLQKVEAEQVQAKSL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130
             E    + ++E +    +          + +          D     LE+ AGAGG E+
Sbjct: 70  LKESRGDAAMEELAQQELQELDRHHADLIQRITLALLPKDPRDERSVMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R++ +R +    +  ++ +  G K   L +KG   +  LK E GVHR+
Sbjct: 130 CLWAGDLARMYERFSSRRGWSVTPVSANEADLGGYKELILSVKGDAVFSELKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +E++I   D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPSTESQGRVHTSTATVAVMP-EADPVEVQIDPRDLDISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C QERSQ +N+ +A  +LRAKLY  E Q  E  A+   + ++++G G 
Sbjct: 249 DLMHKPTGIRVFCTQERSQMQNRERALEILRAKLY--ERQLAEANASERSARRSQVGTGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    + D R     +    VL+G +DD + A +A ++
Sbjct: 307 RSEKIRTYNAKD-NRMTDHRLGRNFS-LDPVLEGQMDDVIDACIAEEQ 352


>gi|322517017|ref|ZP_08069906.1| peptide chain release factor RF1 [Streptococcus vestibularis ATCC
           49124]
 gi|322124434|gb|EFX95931.1| peptide chain release factor RF1 [Streptococcus vestibularis ATCC
           49124]
          Length = 359

 Score =  205 bits (521), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 97/348 (27%), Positives = 162/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  +       E+
Sbjct: 7   LQAVEDRYEELGELLSDPEVVSDTKRFMELSREEANTRETVTVYREYKQVIQSISDAEEM 66

Query: 76  ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E      L+E +    +      +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKEASGDPDLEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ + +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLAMYQKYAETQGWRFDVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E EI   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ +G G 
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKMDEVIDALVLYDQ 350


>gi|302529800|ref|ZP_07282142.1| peptide chain release factor 1 [Streptomyces sp. AA4]
 gi|302438695|gb|EFL10511.1| peptide chain release factor 1 [Streptomyces sp. AA4]
          Length = 356

 Score =  205 bits (521), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 109/346 (31%), Positives = 172/346 (49%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               +   + L  +  DP +  +   A+ L R    L   +  ++E+     D     EL
Sbjct: 6   LKGLLDEHARLEQELADPAVHADQARARKLGRRYAELSPVVRAVRELDQARDDLSAAKEL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           + E+   +   +              +          D +D  +E+ +G GG ES  +A 
Sbjct: 66  SAEDATFAAEADELTAKIPQLEAKLTELLL--PRDPYDGSDVVMEIKSGEGGEESALFAG 123

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190
            LLRMY R+AE+  +K E L+  + +  G K  TL +K         +  LK E GVHR+
Sbjct: 124 DLLRMYLRYAERHNWKAEVLDSTESDLGGYKDVTLSLKSKTADVEGVWARLKFEGGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS S + +Y    + +E+EI  +D RID +R+SG GGQ VNTTDSAV
Sbjct: 184 QRVPATESQGRIHTSASGVLIY-PEPEEVEVEIDPNDLRIDVFRSSGPGGQSVNTTDSAV 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG+VV CQ E+SQ +N+A+A  +L+A+L  +  ++    A+    S+   +   
Sbjct: 243 RITHLPTGIVVSCQNEKSQIQNRARALQVLQARLQAIAEEEAAAKASDARRSQVRTVDRS 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            ++R+Y   P   + D R N +  +   VLDG+LD  + A  A  +
Sbjct: 303 ERVRTYNF-PENRISDHRVNYKAYNLDQVLDGELDGVLDALAAADR 347


>gi|227823188|ref|YP_002827160.1| peptide chain release factor 1 [Sinorhizobium fredii NGR234]
 gi|227342189|gb|ACP26407.1| peptide chain release factor 1 [Sinorhizobium fredii NGR234]
          Length = 352

 Score =  205 bits (521), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 180/347 (51%), Gaps = 18/347 (5%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLILL 73
              +R + +  +    P           L  E   L   ++ I+  +     L D  +LL
Sbjct: 3   ELERRFAEIEARMSAGPS----ADVYVKLASEYSELQPVVTKIRAYEKATAELADIEVLL 58

Query: 74  ELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
                + +   L E       +RI+   E  Q   L    AD   A LE+ AG GG+E+ 
Sbjct: 59  SDRATDKEMRDLAEMERPEVEERIEALEEEIQILLLPKDAADEKSAILEIRAGTGGSEAA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A  + ++ E L   +GE  G K     + G   +  LK E GVHR+ 
Sbjct: 119 LFAGDLFRMYERYAAAKGWRVEVLSASEGEAGGYKEIIATVSGRGVFSRLKFESGVHRVQ 178

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS +++ V P   + I+IEI   D RIDT R+SGAGGQHVNTTDSAVR
Sbjct: 179 RVPETEASGRIHTSAATVAVLP-EAEEIDIEIRAEDIRIDTMRSSGAGGQHVNTTDSAVR 237

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV    E+SQH+N+A+A  +LR++L+++E Q+    +      K+++G G  
Sbjct: 238 ITHLPTGIVVTSS-EKSQHQNRAKAMQVLRSRLFDMERQR--ADSERSADRKSQVGSGDR 294

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R N+       +++G++D+ + A LA  +
Sbjct: 295 SERIRTYNF-PQGRLTDHRINLTLYKLDRMMEGEIDEVVDALLADHQ 340


>gi|157803730|ref|YP_001492279.1| peptide chain release factor 1 [Rickettsia canadensis str. McKiel]
 gi|166223597|sp|A8EYR1|RF1_RICCK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157784993|gb|ABV73494.1| peptide chain release factor 1 [Rickettsia canadensis str. McKiel]
          Length = 355

 Score =  205 bits (521), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 124/347 (35%), Positives = 183/347 (52%), Gaps = 16/347 (4%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           +    V +   L  K     +  +  E     +E   L+  +  IKE      +      
Sbjct: 6   NLAKIVDKYENLGKKLSS-GIMGD--EFVKASKEYAELEEVVEKIKEYNKAKSELEEANN 62

Query: 75  LALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LE    +   E  ++                +   L   EADS  A +EV AG+GG E
Sbjct: 63  FKLEVGLDNATLEMIEDEIHTLENSLPKLERAVKIALLPKDEADSKSAIIEVRAGSGGEE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A +L  MY R+AE + +  E L I D    G K A+  IKG + +  LK E GVHR
Sbjct: 123 AALFAAILFNMYQRYAELKGWHFEILAIVDTGIGGYKEASASIKGKDVFSKLKCESGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + RI   +S+ R HTS +++ V P   + ++I++ + D RIDTYR+SGAGGQHVNTT+SA
Sbjct: 183 VQRIPETESHGRIHTSAATVAVLP-EVEDVDIKLEDKDLRIDTYRSSGAGGQHVNTTNSA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG+ V  Q E+SQHKNKA+A  +LRA++YE E +K+E+      + + ++G G
Sbjct: 242 VRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQ--KRANNRRGQVGSG 299

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
               +IR+Y   P   V D R N+      +V+ +G LD+F+ A +A
Sbjct: 300 DRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVDALIA 345


>gi|289167970|ref|YP_003446239.1| peptide chain release factor I [Streptococcus mitis B6]
 gi|288907537|emb|CBJ22374.1| peptide chain release factor I [Streptococcus mitis B6]
          Length = 359

 Score =  205 bits (521), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 160/348 (45%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +         L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSETKRFMELSKEEASSRDTVTAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E       +    QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASINGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|190893591|ref|YP_001980133.1| peptide chain release factor 1 protein [Rhizobium etli CIAT 652]
 gi|190698870|gb|ACE92955.1| peptide chain release factor 1 protein [Rhizobium etli CIAT 652]
          Length = 351

 Score =  205 bits (521), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 112/344 (32%), Positives = 179/344 (52%), Gaps = 18/344 (5%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   +  +    P           L  E   L   ++ I+  +  + +   L  L 
Sbjct: 3   ELERRFDEIEARMSAGPA----ADVYVKLASEYSELQPVVTKIRAYEKAVAELADLDTLL 58

Query: 77  LEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            ++     +++ ++       +RI+   +  Q   L    AD   A LE+ AG GG+E+ 
Sbjct: 59  EDKAVDREMRDLAELELPEVKERIEALEQEMQILLLPKDAADEKSAILEIRAGTGGSEAA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A ++ +K E L   +GE  G K     I G   +  LK E GVHR+ 
Sbjct: 119 LFAGDLFRMYERFAAEKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQ 178

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + I+IEI   D RIDT R+SGAGGQHVNTTDSAVR
Sbjct: 179 RVPETEAGGRIHTSAATVAVLP-EAEEIDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVR 237

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+P+G+VV    E+SQH+N+A+A  +LR++LY+ E Q+    +      K+++G G  
Sbjct: 238 ITHLPSGIVVTSS-EKSQHQNRAKAMQVLRSRLYDAERQR--ADSERSADRKSQVGSGDR 294

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       +++G++++ + A +A
Sbjct: 295 SERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVDALMA 337


>gi|149196233|ref|ZP_01873288.1| peptide chain release factor 1 [Lentisphaera araneosa HTCC2155]
 gi|149140494|gb|EDM28892.1| peptide chain release factor 1 [Lentisphaera araneosa HTCC2155]
          Length = 358

 Score =  205 bits (521), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 105/344 (30%), Positives = 179/344 (52%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLIL 72
            +    R   + ++  DP ++ +    + L +E Q L + +      +E++  L DN  +
Sbjct: 8   VERLRMRFKQVESELSDPSVFDDKDRYQDLSKEHQRLSSLVQTYDRQEEVKAELADNKEM 67

Query: 73  LELALEEDDCSILQ-ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L    +E+   +++ + +   + + L  +      +     DS +  +E+   AGG E+ 
Sbjct: 68  LSGESDEELKEMIKLDMAGLEEELPLLEKKLMMLIVPPDPNDSRNCIVEIRPAAGGDEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L++MY  ++  + +K E +E    +  G+K+    +KG + +  L  E GVHR+ 
Sbjct: 128 LFAEDLMKMYQIYSSNKSWKVEVMEYTPSDLGGLKATVFSVKGEDVFRELNFESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   ++  R HTS  ++ V P   + +++ I   + + DTYR+SGAGGQ VNTTDSAVR
Sbjct: 188 RIPKTETQGRVHTSTVTVAVLP-EAEEVDLHIDPKELKFDTYRSSGAGGQCVNTTDSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+    QQERSQH+NK  A  +LR+KL  L+ + R+E   + +  + +IG G  
Sbjct: 247 VTHIPTGLACYSQQERSQHQNKEIAMQLLRSKL--LDEKIRQEKQKMSDERRGQIGTGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R  +   +  DV+ G   D M   LA
Sbjct: 305 SERIRTYNY-PQSRITDHRFGVTVHNLPDVMAGKFADVMDKILA 347


>gi|308190290|ref|YP_003923221.1| peptide chain release factor 1 [Mycoplasma fermentans JER]
 gi|307625032|gb|ADN69337.1| peptide chain release factor 1 [Mycoplasma fermentans JER]
          Length = 371

 Score =  205 bits (521), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 174/347 (50%), Gaps = 6/347 (1%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCD 68
           +F+   +       L  K +D  +  N+ E   + +E   + +      +    Q+   D
Sbjct: 18  MFNSLSDIKNTYDNLVKKLDDHEVINNIKEYTKISKEVNKIKDIAETFTKYLNLQNDYND 77

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
             +++    EE+         +N  ++    E  +   L   E D  +  +E+   AGG 
Sbjct: 78  AKVMINSKNEEEVLFAKSIIEENEVKLAQLEEELKILILPKDENDDKNVIMEIRGAAGGD 137

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L +MYT++AE   FK + +        G       IKG  AY  LK E GVH
Sbjct: 138 EANIFAGDLFKMYTKFAEDLNFKLKVISSSAASVGGFTQIVFSIKGDKAYSKLKFESGVH 197

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS +++ V P +DDS++IEI   D +IDTYR+SGAGGQ VNTTDS
Sbjct: 198 RVQRVPVTESAGRIHTSTATVTVMPEIDDSVDIEIKPQDLQIDTYRSSGAGGQSVNTTDS 257

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VV  Q ERSQ  N+  A  +L++KLY+LE+QK+++              
Sbjct: 258 AVRITHLPTGIVVSSQDERSQIANRETALTVLKSKLYDLEIQKKQQEEAGYRKLAGHGDR 317

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R     +    V++G L   ++A L  ++
Sbjct: 318 SEKIRTYNY-PQDRVTDHRIGYSTS-LKQVMEGKLLTIIEALLTEEQ 362


>gi|257461132|ref|ZP_05626230.1| peptide chain release factor 1 [Campylobacter gracilis RM3268]
 gi|257441506|gb|EEV16651.1| peptide chain release factor 1 [Campylobacter gracilis RM3268]
          Length = 355

 Score =  205 bits (521), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 115/340 (33%), Positives = 173/340 (50%), Gaps = 9/340 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
            R   L+    DP +  ++     L +E++ ++       E    L        L  + D
Sbjct: 11  DRYDELSRMLSDPAITADIANMTALSKEQRSIEPIKEAASEYLKILNQIEENKALLSDAD 70

Query: 81  DCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
              + +E   NL+  K +  E  +   L     D  + +LE+ AG GG E+  +A  LL 
Sbjct: 71  LGELAKEELKNLETQKPQLEEKIKILLLPKDPNDDKNIFLEIRAGTGGDEAALFAGDLLG 130

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
            Y R+A+ R +K E +   +G   G K   LL+KG  AY  LK E G HR+ R+   +S 
Sbjct: 131 AYLRYADLRGYKCEIVSTSEGSVGGYKEVILLVKGAGAYSRLKFEGGTHRVQRVPETESQ 190

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ V P ++DS    I+ +D RID  R+SG GGQ VNTTDSAVRITHIPTG+
Sbjct: 191 GRVHTSAITVAVMPEIEDSEIQ-INPNDLRIDVMRSSGHGGQSVNTTDSAVRITHIPTGL 249

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYV 316
           VV  Q  + QHKNK  A  +L+A+LY+++ Q+R E     +  K ++G G    +IR+Y 
Sbjct: 250 VVTNQDGKDQHKNKEAAMKVLKARLYDMQEQERLE--KERKDRKDQVGTGDRSGRIRTYN 307

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLAIKK 355
             P   + D R N+       ++ G L D+ +   +A  +
Sbjct: 308 Y-PQNRISDHRINLTLYRLDAIMAGGLFDEIIDPLIAHSQ 346


>gi|312891182|ref|ZP_07750704.1| bacterial peptide chain release factor 2 (bRF-2) [Mucilaginibacter
           paludis DSM 18603]
 gi|311296349|gb|EFQ73496.1| bacterial peptide chain release factor 2 (bRF-2) [Mucilaginibacter
           paludis DSM 18603]
          Length = 286

 Score =  205 bits (521), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 129/279 (46%), Positives = 199/279 (71%)

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
               ++   +  +E  +         E  +F+++LS E D   A L++ AGAGGTES DW
Sbjct: 1   MFEFQQSGDATPEEVQEQYNIALKAAEELEFKNMLSAEEDQLSAVLQITAGAGGTESCDW 60

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A+ML+RMY  WA+K  +K   ++  +G+ AG+K+ TL   G  +YG+LKGE GVHRLVR+
Sbjct: 61  ASMLMRMYMMWAQKNGYKITEIDYQEGDVAGVKTVTLQFDGDFSYGYLKGENGVHRLVRV 120

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+D+N++RHTSF+S++VYP+VDD+I I+++ +D   +T+R+ GAGGQ+VN  ++AVR+ 
Sbjct: 121 SPFDANAKRHTSFASVYVYPLVDDTINIDVNPADIEFETFRSGGAGGQNVNKVETAVRLY 180

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H P+G++++ Q+ RSQ +NK  A  +L+++LYE E++KR EI++  E +K +I WG QIR
Sbjct: 181 HKPSGIIIKNQESRSQLQNKENAIRLLKSQLYEAEMRKRMEISDAIEGNKKKIEWGSQIR 240

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           +YVL PY++VKDLRT+ E ++   VLDG+LD+F+KA L 
Sbjct: 241 NYVLHPYKLVKDLRTDYETSNAQAVLDGELDEFLKAYLM 279


>gi|288800098|ref|ZP_06405557.1| peptide chain release factor 1 [Prevotella sp. oral taxon 299 str.
           F0039]
 gi|288333346|gb|EFC71825.1| peptide chain release factor 1 [Prevotella sp. oral taxon 299 str.
           F0039]
          Length = 369

 Score =  205 bits (521), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 90/354 (25%), Positives = 156/354 (44%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   ++T   DP +  +      L +E + L + +   K+    L       ++
Sbjct: 10  LEGLESRFEEVSTLITDPAVIADQNRYVRLTKEYKDLGDIMEARKKYVTCLNVIKEAKDI 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + LQ  +  +   + E           D+ +  +E+ AG GG E+ 
Sbjct: 70  LANETDQDMREIAREELQANEPLLPKLEEEIKIALVPKDPEDAKNVEVEIRAGTGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MY ++ +   +        +G   G K     + G N YG LK E GVHR+ 
Sbjct: 130 LFAGDLFQMYKKYCDSMGWSISITNESEGTMGGFKEIAFSVTGTNVYGILKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P  D      I+E D + DT+R+SGAGGQ+VN  +S VR
Sbjct: 190 RVPATETQGRMHTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKVESGVR 248

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +            ++++C + R Q KNK +A + LR  +Y+ E QK   + +I    K
Sbjct: 249 LRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLRTFIYDREHQKY--VDDIASRRK 306

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + +  G +   IR+Y   P   V D R           + GD+   + A +  +
Sbjct: 307 SLVSTGDRSAKIRTYNY-PQGRVTDHRIGYTTHDLQGFVGGDIQAMIDALIVAE 359


>gi|157827554|ref|YP_001496618.1| peptide chain release factor 1 [Rickettsia bellii OSU 85-389]
 gi|166223596|sp|A8GXI1|RF1_RICB8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157802858|gb|ABV79581.1| peptide chain release factor 1 [Rickettsia bellii OSU 85-389]
          Length = 357

 Score =  205 bits (521), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 122/346 (35%), Positives = 181/346 (52%), Gaps = 15/346 (4%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           +    + +   L+ K     +     E     +E   L++ +  IKE      +      
Sbjct: 9   NLTKILGKYEDLSEKLSS-GIGG--EEFVKASKEYADLEDIVQKIKEYNKAKAELEEANN 65

Query: 75  LALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
              E        E  +   R   +         +   L   EADS  A +E+ AG GG E
Sbjct: 66  FKQEPSLDKATLEMIEEEIRNLEDSLPTLERSVKIALLPKDEADSKSAIIEIRAGTGGEE 125

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L  MY R+AE + ++ E L I +    G K  +  IKG + +  LK E GVHR
Sbjct: 126 AALFAAKLFNMYQRYAELKGWRFEILSIDETGIGGYKEVSASIKGKDVFSKLKFESGVHR 185

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P   + ++I++ E D RIDTYRASGAGGQHVNTTDSA
Sbjct: 186 VQRVPETESQGRIHTSAATVAVLP-EVEDVDIKLEEKDLRIDTYRASGAGGQHVNTTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG+ V  Q E+SQHKNKA+A  +LRA++YE E +K+++      + + +IG G
Sbjct: 245 VRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKDQER--ANNRREQIGSG 302

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               +IR+Y   P   V D R N+      +V++G LD+F++A +A
Sbjct: 303 DRSERIRTYNF-PQGRVSDHRINLTLYKIDEVINGQLDEFIEALIA 347


>gi|262277365|ref|ZP_06055158.1| peptide chain release factor 2 [alpha proteobacterium HIMB114]
 gi|262224468|gb|EEY74927.1| peptide chain release factor 2 [alpha proteobacterium HIMB114]
          Length = 248

 Score =  205 bits (521), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 167/244 (68%), Positives = 202/244 (82%)

Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167
           +SG+AD  D YLEVHAGAGGTESQDWA+M+ +MY +W+EK     E +    GEEAGIKS
Sbjct: 1   MSGDADKFDCYLEVHAGAGGTESQDWADMIRKMYLKWSEKTDRSCELISESKGEEAGIKS 60

Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
           +T+ I G N++G+LK E GVHRLVRISP+DSN RRHTSF+S+WVYPV+DD IEIEI E D
Sbjct: 61  STIKIGGLNSFGYLKNESGVHRLVRISPFDSNQRRHTSFASVWVYPVIDDKIEIEIKEKD 120

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            R+DTYR+SGAGGQHVNTTDSAVRITH+PT +VVQCQ ERSQHKNK  A  ML+++LYEL
Sbjct: 121 LRVDTYRSSGAGGQHVNTTDSAVRITHLPTKIVVQCQNERSQHKNKDTAMKMLKSRLYEL 180

Query: 288 ELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           EL+KREE A   E SKT+IGWG QIRSYVLQPYQ+VKD RTN+E TSP DVL+G++ +F+
Sbjct: 181 ELKKREESAQSAEDSKTDIGWGHQIRSYVLQPYQLVKDNRTNVESTSPDDVLNGEIGEFL 240

Query: 348 KATL 351
           ++ L
Sbjct: 241 ESAL 244


>gi|118469567|ref|YP_889202.1| peptide chain release factor 1 [Mycobacterium smegmatis str. MC2
           155]
 gi|118170854|gb|ABK71750.1| peptide chain release factor 1 [Mycobacterium smegmatis str. MC2
           155]
          Length = 359

 Score =  205 bits (521), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 115/334 (34%), Positives = 171/334 (51%), Gaps = 9/334 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + L  +  DP L  +   A+ + R    +   ++  ++++    D     EL
Sbjct: 10  IEALLAEHADLERQLADPALHADAGAARKVGRRFAQVSPIVACYRKLEAARGDLEAAREL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               DD S   E  +   ++                 D++D  LEV +G GG ES  +A 
Sbjct: 70  --AADDASFADEVEELTAKVAELDNQLTDLLAPRDPHDADDIVLEVKSGEGGEESALFAA 127

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRL 190
            L RMY R+AE+  +    L+    +  G K ATL I+         +  LK E GVHR+
Sbjct: 128 DLARMYIRYAERHGWTVTLLDETTSDLGGYKDATLSIRSRGDSADGVWARLKFEGGVHRV 187

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + VYP  ++  E++I ESD RID YR+SG GGQ VNTTDSAV
Sbjct: 188 QRVPVTESQGRVHTSAAGVLVYPEPEEVEEVQIDESDLRIDVYRSSGKGGQGVNTTDSAV 247

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG+VV CQ ERSQ +NKA+A  +L A+L  L  ++ E  A+   +S+   +   
Sbjct: 248 RITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQALAEEQAEADASADRASQIRTVDRS 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL 343
            +IR+Y   P   + D R N +  +   VLDGD+
Sbjct: 308 ERIRTYNF-PENRIADHRINFKAHNLDQVLDGDM 340


>gi|86609051|ref|YP_477813.1| peptide chain release factor 1 [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|119361626|sp|Q2JL68|RF1_SYNJB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|86557593|gb|ABD02550.1| peptide chain release factor 1 [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 360

 Score =  205 bits (521), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 172/344 (50%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72
             N       L  +  DP +  +  E + + + R  L+  +    + Q    D      L
Sbjct: 10  LKNVEATFQELTVRLADPDVATDPAELQRIAKARSSLEATVQAFHDWQKLNRDLQQTEEL 69

Query: 73  LELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           L  +  + +   +          R +   E      L     D  +  LE+ AG GG E+
Sbjct: 70  LRESASDPELEAMARAELEQLRARQEQLEEKLTLLLLPRDPNDDKNIMLEIRAGTGGEEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMYTR+AEK  +      + +GE  G K A L I+G   Y  LK E GVHR+
Sbjct: 130 ALWAADLARMYTRYAEKLGWSVRLASLSEGELGGYKEAILEIQGDQVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   D +E+ I   D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPVTEAQGRVHTSTATVAVMP-EVDEVEVVIDPKDIEIKTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C +ERSQ +N+ +A  +LRAKLYE++LQ+++  A+I  + + ++G G 
Sbjct: 249 DLLHKPTGIRVFCTEERSQLQNRQRAMQILRAKLYEMKLQEQQ--ASISSARRMQVGTGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y  +    V D R N +      +LDG+LDD ++A +
Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLN-QNFPLQPILDGELDDLIQACI 348


>gi|223932122|ref|ZP_03624126.1| peptide chain release factor 1 [Streptococcus suis 89/1591]
 gi|302023743|ref|ZP_07248954.1| peptide chain release factor 1 [Streptococcus suis 05HAS68]
 gi|330832776|ref|YP_004401601.1| peptide chain release factor 1 [Streptococcus suis ST3]
 gi|223899103|gb|EEF65460.1| peptide chain release factor 1 [Streptococcus suis 89/1591]
 gi|329306999|gb|AEB81415.1| peptide chain release factor 1 [Streptococcus suis ST3]
          Length = 359

 Score =  205 bits (521), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 96/348 (27%), Positives = 164/348 (47%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEAATRDTVTAYREYKTVLQNMVDAEEM 66

Query: 76  ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E    + L+E +    +      +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKESSGDADLEEMAKEELKQAKADKEAYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEGQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ + P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLIMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVVDALVLYDQ 350


>gi|262199727|ref|YP_003270936.1| peptide chain release factor 1 [Haliangium ochraceum DSM 14365]
 gi|262083074|gb|ACY19043.1| peptide chain release factor 1 [Haliangium ochraceum DSM 14365]
          Length = 363

 Score =  205 bits (521), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 121/344 (35%), Positives = 187/344 (54%), Gaps = 7/344 (2%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +   +R   ++       +  N  E   L RE   L   ++  +E ++          + 
Sbjct: 12  EALERRYQEVSDLLGQNEVISNRSEFTKLSREHAELAKLVAAWQEYRELRTQESEARAMV 71

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E D  + +   + L+ ++  +E K+       L     D  +  LE+ AG GG E+  
Sbjct: 72  ASESDAEMRELAREELRALQESLEVKEQHIKILLLPKDPNDGKNILLELRAGTGGDEAAL 131

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY R+AE++ +KTE + + DG   G+K A +LI G + Y  LK E GVHR+ R
Sbjct: 132 FAGDLYRMYMRYAERQGWKTEIMSMSDGAAGGMKEAVVLIAGKDVYSSLKYESGVHRVQR 191

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P   + ++I++ E D RID YR+SG GGQ VNTTDSAVR+
Sbjct: 192 VPATESQGRVHTSAATVVVMP-EAEEVDIKLEEKDLRIDVYRSSGPGGQSVNTTDSAVRV 250

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG-WGRQ 311
           TH+PTG+VV CQ E+SQHKNKA+A  +LR+++ ++E+ K+E        S  + G    +
Sbjct: 251 THLPTGIVVICQDEKSQHKNKAKAMRILRSRVLDVEIAKQEAEERDQRRSMVKSGDRSEK 310

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+ + + S VLDGDL D + A  A  +
Sbjct: 311 IRTYNF-PQDRLTDHRINLTRHNLSSVLDGDLYDVVDALRAHYQ 353


>gi|225861003|ref|YP_002742512.1| peptide chain release factor 1 [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298230460|ref|ZP_06964141.1| peptide chain release factor 1 [Streptococcus pneumoniae str.
           Canada MDR_19F]
 gi|298255330|ref|ZP_06978916.1| peptide chain release factor 1 [Streptococcus pneumoniae str.
           Canada MDR_19A]
 gi|298502960|ref|YP_003724900.1| peptide chain release factor 1 [Streptococcus pneumoniae
           TCH8431/19A]
 gi|254790904|sp|C1CRE0|RF1_STRZT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|225726985|gb|ACO22836.1| peptide chain release factor 1 [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298238555|gb|ADI69686.1| peptide chain release factor 1 [Streptococcus pneumoniae
           TCH8431/19A]
 gi|327389396|gb|EGE87741.1| peptide chain release factor 1 [Streptococcus pneumoniae GA04375]
 gi|332201491|gb|EGJ15561.1| peptide chain release factor 1 [Streptococcus pneumoniae GA47368]
          Length = 359

 Score =  205 bits (521), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 97/348 (27%), Positives = 159/348 (45%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E     + +   +E +  L + +   E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNIVDAEEM 66

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E       +    QE  D     +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKESGGDADLEEMAKQELKDAKAEKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       G K    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVGGFKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V     + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVML-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNREKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEVVDALVLYDQ 350


>gi|312863805|ref|ZP_07724043.1| peptide chain release factor 1 [Streptococcus vestibularis F0396]
 gi|311101341|gb|EFQ59546.1| peptide chain release factor 1 [Streptococcus vestibularis F0396]
          Length = 359

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 162/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  +       E+
Sbjct: 7   LQAVEDRYEELGELLSDPEVVSDTKRFMELSREEANTRETVTVYREYKQVIQSISDAEEM 66

Query: 76  ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E      L+E +    +      +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKEASGDPDLEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLAMYQKYAETQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E EI   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ +G G 
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKMDEVIDALVLYDQ 350


>gi|117927849|ref|YP_872400.1| peptide chain release factor 1 [Acidothermus cellulolyticus 11B]
 gi|166223522|sp|A0LSK4|RF1_ACIC1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|117648312|gb|ABK52414.1| bacterial peptide chain release factor 1 (bRF-1) [Acidothermus
           cellulolyticus 11B]
          Length = 364

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 112/343 (32%), Positives = 174/343 (50%), Gaps = 9/343 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +  ++  + L  +  DP +  +   A+ L R    L   +   +  +    D  +
Sbjct: 1   MFEAVEEVLREYADLERRLADPAVHADPRTARTLGRRYAQLGPIVEAYRRWKAL--DADV 58

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
                L   D +   E        +   E  +     +   D  D  +++ AG GG ES 
Sbjct: 59  AAAHELAAADPAFRAEIPALEAEREAVAERLRSLLAPADPNDGKDVIMQIKAGEGGEESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA---YGWLKGEQGVH 188
            +A  LLRMY R+AE+R +KTE L+  + +  G K  T+ I+   +   +  LK E GVH
Sbjct: 119 LFAGDLLRMYLRYAERRGWKTEILDATESDLGGYKDVTVAIRADGSEGAWSRLKFEGGVH 178

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS   + V P   + ++++I  +D RID +R+SG GGQ VNTTDS
Sbjct: 179 RVQRVPVTESQGRIHTSAVGVLVMP-EAEEVDVQIDPNDLRIDVFRSSGPGGQSVNTTDS 237

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307
           AVRITH+PTG+VV CQ E+SQ +NK  A  +LR++L  L  ++ E  A     S+   + 
Sbjct: 238 AVRITHLPTGIVVSCQNEKSQLQNKETALRILRSRLLALAQEEAEAQAAAQRRSQVRTVD 297

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              +IR+Y   P   + D R N +  +   VLDGDLD  ++A 
Sbjct: 298 RSERIRTYNF-PENRISDHRVNYKAYNLDQVLDGDLDGVIQAL 339


>gi|283782510|ref|YP_003373265.1| peptide chain release factor 1 [Pirellula staleyi DSM 6068]
 gi|283440963|gb|ADB19405.1| peptide chain release factor 1 [Pirellula staleyi DSM 6068]
          Length = 358

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 99/346 (28%), Positives = 163/346 (47%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  + R   L     DP L  +  +   + RE   L       +  +    +   L+E+
Sbjct: 5   LEQKLARFEELERMMTDPSLMSDSSKMGNVAREHGSLAKLAVKYRRFKQLNDEVAALVEM 64

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEAD--SNDAYLEVHAGAGGTESQD 132
           +   D     + E      R + E  + +   +  G  D   +   +E+ AG GG E   
Sbjct: 65  SKVSDPDEREMAEAEIPNVRAERERIWSEVLDMTVGGEDAQRSRCVMEIRAGVGGAEGAL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L +MY R+ EK+ +K E +E    +  G K   L  +G   +  L+ E G HR+ R
Sbjct: 125 FAQDLYQMYKRFGEKKGWKVELMEASPTDMGGFKEVILGFEGEGVFRELQYESGGHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P   + +E+ I   + R+D + ASG GGQHVN T+SAVR+
Sbjct: 185 VPETEAKGRVHTSAATVAVLP-EPEDVEVNIKPDEYRLDKFCASGPGGQHVNKTESAVRL 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH  TG+VV  Q E+SQHKN A+A  +L+++LY+   Q+  E A      K+ +G G   
Sbjct: 244 THYETGIVVSMQDEKSQHKNLAKALRILKSRLYDFYRQR--EQAKRAAERKSLVGSGDRS 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P     D R  +       +++GDL   +   +   +
Sbjct: 302 ERIRTYNF-PENRCTDHRIGLTLYKLDQIINGDLQPVLDGLIEHDR 346


>gi|119486315|ref|ZP_01620374.1| Peptide chain release factor 2 [Lyngbya sp. PCC 8106]
 gi|119456528|gb|EAW37658.1| Peptide chain release factor 2 [Lyngbya sp. PCC 8106]
          Length = 308

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 138/299 (46%), Positives = 197/299 (65%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +   ++ Q  + D   ++EL   E D S+L E   NL R+  +++  + + LLS   D N
Sbjct: 1   MQQYQQWQKTIEDTDAIVELLELESDESLLAEAESNLTRLNHDLDRWELQQLLSAPYDKN 60

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
            A L ++AGAGGT++QDWA MLLRMYTRW E   +K    E+ +G+EAGIKS TL I+G 
Sbjct: 61  GAVLTINAGAGGTDAQDWAEMLLRMYTRWGEAHGYKVYLAELSEGDEAGIKSVTLEIEGR 120

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYG+LK E+G HRLVRISP+++N +R TSF+ + + P++D  + +EI E D  + T RA
Sbjct: 121 YAYGYLKCEKGTHRLVRISPFNANGKRQTSFAGVEIMPMIDQGVHLEIPEKDLEVTTSRA 180

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
            G GGQ+VN  ++AVRI H+PTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R + 
Sbjct: 181 GGKGGQNVNKVETAVRIVHLPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQE 240

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                    E  WG QIR+YV  PYQMVKDLRT+ E T+  DV++G+LD F++A L  +
Sbjct: 241 IAEIRGDLVEAAWGNQIRNYVFHPYQMVKDLRTSEETTAIDDVMNGELDRFIQAYLRQE 299


>gi|304382675|ref|ZP_07365169.1| peptide chain release factor RF1 [Prevotella marshii DSM 16973]
 gi|304336300|gb|EFM02542.1| peptide chain release factor RF1 [Prevotella marshii DSM 16973]
          Length = 370

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 88/354 (24%), Positives = 156/354 (44%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   + T   DP +  +      L +E + L++ +   +   + +       ++
Sbjct: 11  LDGLESRYEEVATLITDPDVIADQERYVRLTKEYKDLEDIMDARRRYINCINAIQEAKDI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + LQ  +      + E           D+ +  +E+ AG GG E+ 
Sbjct: 71  LNNETDADLKEMAREELQSNETLQPQLEEEIKIALVPKDPEDAKNVQMEIRAGTGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY ++ + + +      + +G   G K     + G + YG LK E GVHR+ 
Sbjct: 131 LFAGDLFNMYKKFCDSKGWTLSITSVSEGAVGGFKEIDFAVSGTDVYGILKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P  D      I+E D + DT+R+SGAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRMHTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKVESGVR 249

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +            ++++C + R Q KNK +A + LR  +Y+ E QK   + +I    K
Sbjct: 250 LRYPWKNPNTGETEEILIECTETRDQPKNKERALSRLRTFIYDREHQKY--VDDIASRRK 307

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + +  G +   IR+Y  Q    V D R           L G++ + + A    +
Sbjct: 308 SLVSTGDRSAKIRTYNYQ-QGRVTDHRIGFTTHDLQGFLAGNIQEMIDALTVAE 360


>gi|332876543|ref|ZP_08444305.1| peptide chain release factor 1 [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332685510|gb|EGJ58345.1| peptide chain release factor 1 [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 370

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 94/364 (25%), Positives = 162/364 (44%), Gaps = 20/364 (5%)

Query: 7   LNCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           +     + D  +  V R   + T   DP++  +      L +E + L + +   KE  D 
Sbjct: 1   MAENNSILDKLEGLVSRYEEVGTLITDPNVISDQKRYVKLTKEYKDLGDIMKARKEYMDS 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEV 121
           L       E+   EDD  + +   + +   +  +   +       + +   D  +  +E+
Sbjct: 61  LQTLQDAKEMLATEDDPEMKEMAREEMAATEKHIPEMEERIKLLLVPADPEDDKNVIMEI 120

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
             G GG E+  +A  L RMYT++ E + +K       +G   G K     + G   YG L
Sbjct: 121 RGGTGGDEAALFAGDLFRMYTKYCEMKGWKIAISSFTEGAAGGFKEIIFSVTGEKVYGTL 180

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   ++  R HTS +++ V P   +     I+E + + DT+R+SGAGGQ
Sbjct: 181 KYESGVHRVQRVPATETQGRVHTSAATVAVLPEAQEFDVE-INEGEIKWDTFRSSGAGGQ 239

Query: 242 HVNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  +S VR  ++           ++++C + R Q KNK +A   LR  +Y+ E QK  
Sbjct: 240 NVNKVESGVRARYLWKNPNTGETEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY- 298

Query: 294 EIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            I +I    KT +  G +   IR+Y   P   + D R      +    +DG++ D +   
Sbjct: 299 -IDDIANRRKTMVSTGDRSAKIRTYNY-PQSRITDHRIGYNMQNLPSFMDGNIQDCIDQL 356

Query: 351 LAIK 354
              +
Sbjct: 357 TVAE 360


>gi|307321056|ref|ZP_07600462.1| peptide chain release factor 1 [Sinorhizobium meliloti AK83]
 gi|306893331|gb|EFN24111.1| peptide chain release factor 1 [Sinorhizobium meliloti AK83]
          Length = 360

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 177/344 (51%), Gaps = 18/344 (5%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   +  +    P           L  E   L   +S I+  +    +   +  + 
Sbjct: 11  ELERRFGEIEARMSAGPS----ADVYVKLASEYSELQPVVSKIRAYEKATAELADIAAML 66

Query: 77  LEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            +      +++ ++  +      I+   +  Q   L    AD   A LE+ AG GG+E+ 
Sbjct: 67  ADRATDKDMRDLAEMEKPEVEEKIEALEQEIQILLLPKDAADEKSAILEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A  + ++ E L   +GE  G K     + G   +  LK E GVHR+ 
Sbjct: 127 LFAGNLFRMYERYAASKGWRVEVLSASEGEAGGYKEIIATVSGRGVFSRLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS +++ V P   + I+I++   D R+DT R+SGAGGQHVNTTDSAVR
Sbjct: 187 RVPETEASGRIHTSAATVAVLP-EAEEIDIDVRPEDIRVDTMRSSGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV    E+SQH+N+A+A  +LR++LY++E Q+    +      ++++G G  
Sbjct: 246 ITHIPTGIVVTSS-EKSQHQNRAKAMQVLRSRLYDMERQR--ADSERSADRRSQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       +++G++DD + A LA
Sbjct: 303 SERIRTYNF-PQGRLTDHRINLTLYKLDRMMEGEIDDVVDALLA 345


>gi|57239178|ref|YP_180314.1| peptide chain release factor 1 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58579136|ref|YP_197348.1| peptide chain release factor 1 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58617189|ref|YP_196388.1| peptide chain release factor 1 [Ehrlichia ruminantium str. Gardel]
 gi|75432752|sp|Q5FGZ2|RF1_EHRRG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|81557311|sp|Q5HB80|RF1_EHRRW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|57161257|emb|CAH58178.1| peptide release factor 1 [Ehrlichia ruminantium str. Welgevonden]
 gi|58416801|emb|CAI27914.1| Peptide chain release factor 1 (RF-1) [Ehrlichia ruminantium str.
           Gardel]
 gi|58417762|emb|CAI26966.1| Peptide chain release factor 1 (RF-1) [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 359

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 123/352 (34%), Positives = 183/352 (51%), Gaps = 16/352 (4%)

Query: 14  FD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           FD   +   ++   L    EDP     V       +E   L   IS I E      D   
Sbjct: 3   FDSGLEELSEKFYKLKHLLEDPSQLS-VESFVNASKEYSELLPIISVIDEYNAVQKDIKD 61

Query: 72  LLELALEEDDCSILQETSDNLQRIK-----LEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
           L EL   ++  + L+  +                  +   L   + D+ +A LE+ AG G
Sbjct: 62  LQELINNQETDTELKNLAKEEFYELQKQLPKVKHKLKLSLLPKDKDDARNAILEIRAGTG 121

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +   L RMY ++AEK+ +K E +        G K  +L + G N +  LK E G
Sbjct: 122 GEEAALFVTDLYRMYIKYAEKKNWKIEQINSSSTGIGGHKEVSLCVSGSNVFAKLKFESG 181

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +++ R HTS +++ V P   + ++++I E D RID YR+SG GGQ VNTT
Sbjct: 182 VHRVQRVPETEASGRLHTSAATVAVLP-EIEEVDLKIDEKDLRIDVYRSSGPGGQSVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIP+G+VV  Q E+SQHKNK +A  +LRA+LY+LE QKR+   +     K++I
Sbjct: 241 DSAVRITHIPSGIVVIQQDEKSQHKNKNKALKVLRARLYDLEKQKRDAEISQL--RKSQI 298

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIK 354
           G G    +IR+Y   P   + D R N+      D++ +GDLD+ ++A +A  
Sbjct: 299 GSGDRSERIRTYNF-PQSRITDHRINLTLYRLEDIMKEGDLDELIEALIAED 349


>gi|114327270|ref|YP_744427.1| peptide chain release factor 1 [Granulibacter bethesdensis CGDNIH1]
 gi|119361545|sp|Q0BUJ8|RF1_GRABC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|114315444|gb|ABI61504.1| bacterial peptide chain release factor 1 (RF-1) [Granulibacter
           bethesdensis CGDNIH1]
          Length = 352

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 117/345 (33%), Positives = 173/345 (50%), Gaps = 11/345 (3%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           + D  V R   L     +     N        RE   L+  ++ I+E+            
Sbjct: 6   NLDRIVARAEELRASLSEG---LNGDSFAAASRELAELEPVVARIEELWAAERGLAEAEA 62

Query: 75  LALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           +  + D       E     +++       +   L   EAD   A LE+   AGG E+  +
Sbjct: 63  MLADPDMRELAESEAEILREKLPSLTREIRIALLPKDEADERSAILEIRPAAGGDEASLF 122

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L  MY R+AE R ++ E LE  D    G+K     I G + +  LK E GVHR+ R+
Sbjct: 123 AAQLFSMYQRYAEIRGWRFEILEYDDTGLGGLKGGMAEITGRSVFARLKYESGVHRVQRV 182

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS  ++ V P   + +++++ E D RID YRASGAGGQHVN T+SAVRIT
Sbjct: 183 PATESQGRIHTSTVTVAVLP-EAEDVDVQVDEGDLRIDVYRASGAGGQHVNKTESAVRIT 241

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+P+G+VV  Q+E+SQHKN+A+A  +L+A+LY  E Q+    A+     + ++G G    
Sbjct: 242 HLPSGIVVAMQEEKSQHKNRAKAMKILKARLY--EQQRAALHASRAADRRAQVGTGDRSE 299

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R N+       V+ G+LDDF+ A  A  +
Sbjct: 300 RIRTYNF-PQGRVSDHRINLTLYKIDRVMLGELDDFVDALTAEDQ 343


>gi|119361587|sp|Q2K3T1|RF1_RHIEC RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 359

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 178/344 (51%), Gaps = 18/344 (5%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   +  +    P           L  E   L   ++ I+  +  + +   L  L 
Sbjct: 11  ELERRFGEIEARMSAGPA----ADVYVKLASEYSELQPVVTKIRAYEKAVAELADLETLL 66

Query: 77  LEEDDCSILQETSDN-----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            ++     +++ ++        RI+   +  Q   L    AD   A LE+ AG GG+E+ 
Sbjct: 67  EDKSVDREMRDLAELELPEVRARIEALEQEMQILLLPKDAADEKSAILEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A ++ +K E L   +GE  G K     I G   +  LK E GVHR+ 
Sbjct: 127 LFAGDLFRMYERFASEKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + I+IEI   D RIDT R+SGAGGQHVNTTDSAVR
Sbjct: 187 RVPETEAGGRIHTSAATVAVLP-EAEEIDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV    E+SQH+N+A+A  +LR++LY+ E Q+    +      K+++G G  
Sbjct: 246 ITHLPTGIVVTSS-EKSQHQNRAKAMQVLRSRLYDAERQR--ADSERSADRKSQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       +++G++++ + A +A
Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVDALMA 345


>gi|190572913|ref|YP_001970758.1| peptide chain release factor 1 [Stenotrophomonas maltophilia K279a]
 gi|229576662|sp|B2FQ14|RF1_STRMK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|190010835|emb|CAQ44444.1| putative peptide chain release factor 1 [Stenotrophomonas
           maltophilia K279a]
          Length = 360

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 106/323 (32%), Positives = 167/323 (51%), Gaps = 8/323 (2%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN- 91
           P +  +    + L RE   L+     + +      D      +  + D   +  E     
Sbjct: 26  PDVVADNTRFRDLSREFAQLEPIAIALADESRAKADLAAAEGMRADPDLRELADEEIAAA 85

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
             R+    +      +     D  + +LEV AG GG E+  +A  L RMY R+AE++ +K
Sbjct: 86  QARLLELEQELALLLVPRDPRDEGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWK 145

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E    + GE  G K     + G  A+  LK E G HR+ R+   +S  R HTS +++ +
Sbjct: 146 VEIESDNPGEHGGYKEVVARVVGRGAFSRLKFESGTHRVQRVPATESQGRIHTSAATVAI 205

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P  D+  +I I+ +D ++DT+R+SGAGGQHVN T+SA+RITH+PTGVVV+CQ ERSQH 
Sbjct: 206 IPEADEVDDIVINPADLKVDTFRSSGAGGQHVNKTESAIRITHVPTGVVVECQTERSQHA 265

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRT 328
           N+ +A   L+A+L + E Q+++  A   ES + ++G G    +IR+Y   P   + D R 
Sbjct: 266 NRDKAMKRLKAQLLDAERQRQD--AAQAESRRLQVGSGDRSQRIRTYNF-PQGRITDHRV 322

Query: 329 -NIEKTSPSDVLDGDLDDFMKAT 350
             +      ++L GDLD  ++  
Sbjct: 323 EGLTLYDLPNILAGDLDPLLQRL 345


>gi|86359340|ref|YP_471232.1| peptide chain release factor 1 [Rhizobium etli CFN 42]
 gi|86283442|gb|ABC92505.1| peptide chain release factor 1 protein [Rhizobium etli CFN 42]
          Length = 351

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 178/344 (51%), Gaps = 18/344 (5%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   +  +    P           L  E   L   ++ I+  +  + +   L  L 
Sbjct: 3   ELERRFGEIEARMSAGPA----ADVYVKLASEYSELQPVVTKIRAYEKAVAELADLETLL 58

Query: 77  LEEDDCSILQETSDN-----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            ++     +++ ++        RI+   +  Q   L    AD   A LE+ AG GG+E+ 
Sbjct: 59  EDKSVDREMRDLAELELPEVRARIEALEQEMQILLLPKDAADEKSAILEIRAGTGGSEAA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A ++ +K E L   +GE  G K     I G   +  LK E GVHR+ 
Sbjct: 119 LFAGDLFRMYERFASEKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQ 178

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + I+IEI   D RIDT R+SGAGGQHVNTTDSAVR
Sbjct: 179 RVPETEAGGRIHTSAATVAVLP-EAEEIDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVR 237

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV    E+SQH+N+A+A  +LR++LY+ E Q+    +      K+++G G  
Sbjct: 238 ITHLPTGIVVTSS-EKSQHQNRAKAMQVLRSRLYDAERQR--ADSERSADRKSQVGSGDR 294

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       +++G++++ + A +A
Sbjct: 295 SERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVDALMA 337


>gi|238810252|dbj|BAH70042.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 373

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 174/347 (50%), Gaps = 6/347 (1%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCD 68
           +F+   +       L  K +D  +  N+ E   + +E   + +      +    Q+   D
Sbjct: 20  MFNSLSDIKNTYDNLVKKLDDHEVINNIKEYTKISKEVNKIKDIAETFTKYLNLQNDYND 79

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
             +++    EE+         +N  ++    E  +   L   E D  +  +E+   AGG 
Sbjct: 80  AKVMINSKNEEEVLFAKSIIEENEVKLAQLEEELKILILPKDENDDKNVIMEIRGAAGGD 139

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L +MYT++AE   FK + +        G       IKG  AY  LK E GVH
Sbjct: 140 EANIFAGDLFKMYTKFAEDLNFKLKVISSSAASVGGFTQIVFSIKGDKAYSKLKFESGVH 199

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS +++ V P +DDS++IEI   D +IDTYR+SGAGGQ VNTTDS
Sbjct: 200 RVQRVPVTESAGRIHTSTATVTVMPEIDDSVDIEIKPQDLQIDTYRSSGAGGQSVNTTDS 259

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VV  Q ERSQ  N+  A  +L++KLY+LE+QK+++              
Sbjct: 260 AVRITHLPTGIVVSSQDERSQIANRETALTVLKSKLYDLEIQKKQQEEAGYRKLAGHGDR 319

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R     +    V++G L   ++A L  ++
Sbjct: 320 SEKIRTYNY-PQDRVTDHRIGYSTS-LKQVMEGKLLTIIEALLTEEQ 364


>gi|15966364|ref|NP_386717.1| peptide chain release factor 1 [Sinorhizobium meliloti 1021]
 gi|307313049|ref|ZP_07592676.1| peptide chain release factor 1 [Sinorhizobium meliloti BL225C]
 gi|20139338|sp|Q92MK5|RF1_RHIME RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|15075635|emb|CAC47190.1| Probable peptide chain release factor 1 (RF-1) protein
           [Sinorhizobium meliloti 1021]
 gi|306899368|gb|EFN30002.1| peptide chain release factor 1 [Sinorhizobium meliloti BL225C]
          Length = 360

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 177/344 (51%), Gaps = 18/344 (5%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   +  +    P           L  E   L   +S I+  +    +   +  + 
Sbjct: 11  ELERRFGEIEARMSAGPS----ADVYVKLASEYSELQPVVSKIRAYEKATAELADIAAML 66

Query: 77  LEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            +      +++ ++  +      I+   +  Q   L    AD   A LE+ AG GG+E+ 
Sbjct: 67  ADRATDKDMRDLAEMEKPEVEEKIEALEQEIQILLLPKDAADEKSAILEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A  + ++ E L   +GE  G K     + G   +  LK E GVHR+ 
Sbjct: 127 LFAGDLFRMYERYAASKGWRVEVLSASEGEAGGYKEIIATVSGRGVFSRLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS +++ V P   + I+I++   D R+DT R+SGAGGQHVNTTDSAVR
Sbjct: 187 RVPETEASGRIHTSAATVAVLP-EAEEIDIDVRPEDIRVDTMRSSGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV    E+SQH+N+A+A  +LR++LY++E Q+    +      ++++G G  
Sbjct: 246 ITHIPTGIVVTSS-EKSQHQNRAKAMQVLRSRLYDMERQR--ADSERSADRRSQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       +++G++DD + A LA
Sbjct: 303 SERIRTYNF-PQGRLTDHRINLTLYKLDRMMEGEIDDVVDALLA 345


>gi|75908996|ref|YP_323292.1| peptide chain release factor 2 [Anabaena variabilis ATCC 29413]
 gi|75702721|gb|ABA22397.1| bacterial peptide chain release factor 2 (bRF-2) [Anabaena
           variabilis ATCC 29413]
          Length = 292

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 124/255 (48%), Positives = 178/255 (69%)

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
           +  + + LLSG  D+  A L ++AGAGGT++QDWA MLLRMYTRWAE + +K    E  +
Sbjct: 29  DQWELQQLLSGPYDAEGAVLTINAGAGGTDAQDWAFMLLRMYTRWAEDQGYKVALAEESE 88

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
           G+EAGIKSATL I G  AYG+L+ E G HRLVRISP+++N +R TSF+ + V P +D+++
Sbjct: 89  GDEAGIKSATLEITGRYAYGYLRSETGTHRLVRISPFNANGKRQTSFAGVEVMPQLDNTV 148

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           +++I + D  I T R+ G GGQ+VN  ++AVR+ H+PTG+ V+C +ERSQ +NK +A   
Sbjct: 149 QLDIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAVRCTEERSQLQNKEKALAR 208

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           L+AKL  +  +++ +          E  WG QIR+YV  PYQMVKDLRTN E T+ +DV+
Sbjct: 209 LKAKLLVIAQEQKAQEIAQIRGDMVEASWGNQIRNYVFHPYQMVKDLRTNAETTAIADVM 268

Query: 340 DGDLDDFMKATLAIK 354
           +G+LD F++A L  +
Sbjct: 269 NGELDMFIQAYLRQE 283


>gi|326335638|ref|ZP_08201825.1| peptide chain release factor RF2 [Capnocytophaga sp. oral taxon 338
           str. F0234]
 gi|325692404|gb|EGD34356.1| peptide chain release factor RF2 [Capnocytophaga sp. oral taxon 338
           str. F0234]
          Length = 296

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 135/288 (46%), Positives = 206/288 (71%), Gaps = 2/288 (0%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           L +  ++L+     ++    +E      +    +E  +F ++LS E D+  A L++ AGA
Sbjct: 2   LEELQVMLDFYK--ENAISAEEVEAFYAKTLTHIENLEFRNMLSDEGDALSAVLQITAGA 59

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTES DWA+ML+RMY  WA ++ F  + L   +G+ AG+K+ TL I G  A+G+LKGE 
Sbjct: 60  GGTESCDWASMLMRMYIMWANRQGFSVKELNYQEGDVAGVKTVTLEIDGEFAFGYLKGEN 119

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVRISP+DSN++RHTSF+S++VYP+ DD+IEIEI+ +D   +T R+SGAGGQ+VN 
Sbjct: 120 GVHRLVRISPFDSNAKRHTSFASVYVYPLADDTIEIEINPADISFETMRSSGAGGQNVNK 179

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
            ++AVR+ H PTG++++  + RSQ  NK +A  +L+++LYE+EL+KR+   +  E++K +
Sbjct: 180 VETAVRLRHHPTGIIIENSETRSQLDNKNKALQLLKSQLYEMELKKRQAKRDEIEANKMK 239

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           I WG QIR+YV+QPY++VKD+RTN E T+   V++G++DDF+KA L +
Sbjct: 240 IEWGSQIRNYVMQPYKLVKDVRTNYETTNVDAVMNGEIDDFLKAYLML 287


>gi|296445919|ref|ZP_06887870.1| peptide chain release factor 1 [Methylosinus trichosporium OB3b]
 gi|296256587|gb|EFH03663.1| peptide chain release factor 1 [Methylosinus trichosporium OB3b]
          Length = 356

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 103/343 (30%), Positives = 169/343 (49%), Gaps = 15/343 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL---IL 72
            D  ++R   +  +        +      L RE   LD+ ++ I+  +    +      +
Sbjct: 7   LDLILRRHDEIGARLAAG---PDAASFVALSRELATLDDVVARIRTWRATSAEIAGLGEM 63

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA--DSNDAYLEVHAGAGGTES 130
           L     E +     E   +     L    ++ +  L  +   D     LEV AG GG E+
Sbjct: 64  LADPALEPEMRAFVEGELDAAESALASAEQELKLALLPKDSADEKGVILEVRAGTGGDEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L R Y ++A  + +  E L   +G   G K     I G   Y  LK E GVHR+
Sbjct: 124 ALFAGDLFRAYQKYAGVKGWGVEILSASEGALGGYKEIVAEISGRGVYARLKFESGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + +++ I + D +I+T R+ GAGGQHVN T+SA+
Sbjct: 184 QRVPATETQGRIHTSAATVAVLP-QAEEVDVAIDDKDLQIETMRSGGAGGQHVNKTESAI 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+P+G+VV  Q+ERSQH+N+A+A  +LR++L++ E Q+ +  +      K ++G G 
Sbjct: 243 RITHLPSGIVVMMQEERSQHRNRAKAMEVLRSRLFDAERQRLD--SARAADRKAQVGSGD 300

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              +IR+Y   P   V D R N+       V++G+LD+   A 
Sbjct: 301 RSERIRTYNF-PQGRVTDHRINLTLYKLDRVIEGELDEIFDAL 342


>gi|225630064|ref|YP_002726855.1| peptide chain release factor 1 [Wolbachia sp. wRi]
 gi|225592045|gb|ACN95064.1| peptide chain release factor 1 [Wolbachia sp. wRi]
          Length = 357

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 123/348 (35%), Positives = 189/348 (54%), Gaps = 15/348 (4%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           +  +  ++ + +    E+P       E   L +E   L   I  I E      +   L E
Sbjct: 4   NLQDLKKKFNDIERNLENPTNLS-QKEFITLSKEYSELRPIIKIIDEYNTLKEEISDLEE 62

Query: 75  LALEEDDCSILQETSDNLQRIK------LEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           +  +E+    ++E +      K            +   L   E DS +A LE+ AG GG 
Sbjct: 63  IMKDENSEGDIKELAKEEFFEKHKVLLPKIKAKLKLALLPKDEDDSRNAILEIRAGTGGE 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A ML RMY ++AE+R +K E + I +    G K A+ LI G   +  LK E GVH
Sbjct: 123 EAALFAAMLFRMYQKYAERRNWKFEPISISNTGIGGYKEASALINGTEVFARLKFESGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S+ R HTS +++ + P   + ++ +I E D RID YR+SG GGQ VNTTDS
Sbjct: 183 RVQRVPETESSGRLHTSAATVAILP-EVEEVDFKIEEKDLRIDVYRSSGPGGQSVNTTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+TH+PTG+VV  Q E+SQHKNKA+A  +LRA+LYE+E QK+E   +     K++IG 
Sbjct: 242 AVRVTHLPTGIVVIQQDEKSQHKNKAKALKVLRARLYEIERQKKEMERSTM--RKSQIGS 299

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           G    +IR+Y   P   + D R N+       ++ +G+LD+F++A ++
Sbjct: 300 GDRSERIRTYNF-PQSRITDHRINLTSHRLEQIIKEGELDEFIEALIS 346


>gi|15604386|ref|NP_220902.1| peptide chain release factor 1 [Rickettsia prowazekii str. Madrid
           E]
 gi|6225942|sp|Q9ZD21|RF1_RICPR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|3861078|emb|CAA14978.1| PEPTIDE CHAIN RELEASE FACTOR 1 (prfA) [Rickettsia prowazekii]
 gi|292572142|gb|ADE30057.1| Peptide chain release factor RF-1 [Rickettsia prowazekii Rp22]
          Length = 355

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 127/347 (36%), Positives = 184/347 (53%), Gaps = 16/347 (4%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           +    + +   L  K     +  +  E     +E   L++ +  IK+      +      
Sbjct: 6   NLVKILDKYENLGKKLSS-GIIGD--EFVKASKEYAELEDVVVKIKQYNKAKSELEEANN 62

Query: 75  LALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LE    +   E  DN                +   L   EADS  A +EV AG+GG E
Sbjct: 63  FRLEMALDNATLEMIDNEIHTLENLLPKLERAVRISLLPKDEADSKSAIIEVRAGSGGEE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A +L  MY R++E + ++ E L I D    G K A+  IKG + +  LK E GVHR
Sbjct: 123 AALFAAVLFNMYQRYSEFKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + RI   +S  R HTS +++ V P   + I+I+I + D RIDTYRASGAGGQHVNTTDSA
Sbjct: 183 VQRIPETESQGRIHTSAATVAVLP-EAEGIDIKIEDKDLRIDTYRASGAGGQHVNTTDSA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG+ V  Q E+SQHKNKA+A  +LRA+LY  E ++R++     +S + ++G G
Sbjct: 242 VRITHIPTGITVALQDEKSQHKNKAKALKILRARLY--EEKRRQKEQERSDSRRGQVGSG 299

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD-GDLDDFMKATLA 352
               +IR+Y   P   V D R N+      +V+  G LD+F++A +A
Sbjct: 300 DRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKHGQLDEFIEALIA 345


>gi|298346212|ref|YP_003718899.1| peptide subunit release factor RF1 [Mobiluncus curtisii ATCC 43063]
 gi|304390026|ref|ZP_07371980.1| peptide chain release factor RF1 [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|298236273|gb|ADI67405.1| peptide chain release factor RF1 [Mobiluncus curtisii ATCC 43063]
 gi|304326508|gb|EFL93752.1| peptide chain release factor RF1 [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
          Length = 367

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 107/347 (30%), Positives = 167/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++    L  +  DP L  N   A+ + R    L    + ++       D     E+
Sbjct: 11  VEALLEEYHQLEVQMSDPDLHSNQAHARKVGRRYAELSRVNTVVQSWLQARDDLEAGREM 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D     E        +                D+ D  +E+ AG GG ES  +A 
Sbjct: 71  --AGEDPDFAAEIPGLEAAFEQANADLIEALTPRDPDDARDVIMEIKAGEGGEESALFAG 128

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVH 188
            L+RMY  +AEK  +  + L + + +  G+K A++              +  LK E GVH
Sbjct: 129 DLMRMYQHYAEKMGWAVQVLGLTESDLGGVKDASIAFKAKGNPSPEEGVWAHLKYEGGVH 188

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V P  +++ +IEI  +D RID YR+SG GGQ VNTTDS
Sbjct: 189 RVQRVPVTESQGRIHTSAAGVLVMPEAEETGDIEIDPNDLRIDVYRSSGPGGQSVNTTDS 248

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307
           AVRITH+PTG+VV  Q E+SQ +NK     +LR++L +LE +KRE  A    +S+   + 
Sbjct: 249 AVRITHLPTGIVVSMQNEKSQLQNKEAGMRVLRSRLMQLEAEKREAEAAEARASQVRTVD 308

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +IR+Y   P   + D RT  +  +   VL+GDL   +++ +   
Sbjct: 309 RSERIRTYNF-PENRIADHRTGYKAYNLDQVLNGDLAPVIQSAIDAD 354


>gi|296127053|ref|YP_003634305.1| peptide chain release factor 1 [Brachyspira murdochii DSM 12563]
 gi|296018869|gb|ADG72106.1| peptide chain release factor 1 [Brachyspira murdochii DSM 12563]
          Length = 358

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 110/345 (31%), Positives = 177/345 (51%), Gaps = 13/345 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
                  +  K  D ++ ++    + LM+++  +++ +   ++++  L +     E+   
Sbjct: 10  VENTYEDIVQKLNDANI-KDNRVIQDLMKKKSEIEDIVEEYRKLKTVLKEIDDSNEMINN 68

Query: 79  EDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
            +    L+E       +  Q+ +  +   +   L   + D  +  +E+  G GG ES  +
Sbjct: 69  PETDKDLKEMALAEIEELNQKKEDIINSLRLLLLPKDKNDGKNIIIEIRVGTGGDESALF 128

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
              L RMY+R+ E+   K E ++    E  G K     + G NAY  LK E G HR+ RI
Sbjct: 129 VGDLFRMYSRFIERANLKMEIIDTSPTELGGYKEVIFSVSGKNAYRALKFESGTHRVQRI 188

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS S++ V P   +S  + I + D R+D +R+SG GGQ VNTTDSAVRIT
Sbjct: 189 PATESGGRIHTSASTVAVMPEAMESDVV-IKDEDIRVDIFRSSGPGGQSVNTTDSAVRIT 247

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG+VVQCQ E+SQHKNKA+A  +LRA++YE E  +R   A   +  + +IG G    
Sbjct: 248 HLPTGLVVQCQDEKSQHKNKAKALKVLRARIYEKEEAER--KAKEAKERREQIGSGDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R N+        +DG++ +   A    ++
Sbjct: 306 RIRTYNF-PQNRVTDHRINLTLYKLDRFMDGEITEITDALFKKEQ 349


>gi|306827355|ref|ZP_07460642.1| peptide chain release factor RF1 [Streptococcus pyogenes ATCC
           10782]
 gi|304430502|gb|EFM33524.1| peptide chain release factor RF1 [Streptococcus pyogenes ATCC
           10782]
          Length = 359

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 95/348 (27%), Positives = 161/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    ++  +E +  +       E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQTISDAEEM 66

Query: 76  ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +      L+E +    +      +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDPELEEMAKEELKESKAAKEEYEEKLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ +G G 
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y       V D R  +       +L G +D+ + A +   +
Sbjct: 304 RSERIRTYNFS-QNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQ 350


>gi|315657282|ref|ZP_07910164.1| peptide chain release factor RF1 [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|315491754|gb|EFU81363.1| peptide chain release factor RF1 [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 367

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 107/347 (30%), Positives = 167/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++    L  +  DP L  N   A+ + R    L    + ++       D     E+
Sbjct: 11  VEALLEEYHQLEVQMSDPDLHSNQAHARKVGRRYAELSRVNTVVQSWLQARDDLEAGREM 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D     E        +                D+ D  +E+ AG GG ES  +A 
Sbjct: 71  --AGEDPDFAAEIPGLEAAFEQSNADLIEALTPRDPDDARDVIMEIKAGEGGEESALFAG 128

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVH 188
            L+RMY  +AEK  +  + L + + +  G+K A++              +  LK E GVH
Sbjct: 129 DLMRMYQHYAEKMGWTVQVLGLTESDLGGVKDASIAFKAKGNPSPEEGVWAHLKYEGGVH 188

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V P  +++ +IEI  +D RID YR+SG GGQ VNTTDS
Sbjct: 189 RVQRVPVTESQGRIHTSAAGVLVMPEAEETGDIEIDPNDLRIDVYRSSGPGGQSVNTTDS 248

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307
           AVRITH+PTG+VV  Q E+SQ +NK     +LR++L +LE +KRE  A    +S+   + 
Sbjct: 249 AVRITHLPTGIVVSMQNEKSQLQNKEAGMRVLRSRLMQLEAEKREAEAAEARASQVRTVD 308

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +IR+Y   P   + D RT  +  +   VL+GDL   +++ +   
Sbjct: 309 RSERIRTYNF-PENRIADHRTGYKAYNLDQVLNGDLAPVIQSAIDAD 354


>gi|168702592|ref|ZP_02734869.1| peptide chain release factor 2 [Gemmata obscuriglobus UQM 2246]
          Length = 342

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 131/333 (39%), Positives = 193/333 (57%), Gaps = 5/333 (1%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
             L  K  +   W N  +AK ++ + +  +  +   +E+     D   + EL   E+D +
Sbjct: 3   DQLEAKQAEGDFWNNPEKAKSVIGQLKVCNALLKPYEELTAAANDIKAMAEL--AEEDAA 60

Query: 84  ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
              E    LQ+ + + E  + + ++ G+ DS  A + +  GAGGT++ D+A ML R Y R
Sbjct: 61  FESELEPALQKAETQYEAFELQIMMGGKHDSRSAIVTIKPGAGGTDACDFAEMLFRAYGR 120

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           WA++  F  E  +I   +EAG+ S +  I GP AYG+++ E GVHRLVRISP+     R 
Sbjct: 121 WAQRHGFSVEDEDIEPNQEAGVASVSFKIVGPYAYGYMQSEIGVHRLVRISPFGGGDTRQ 180

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TSF++I V P + D IEI I ++D  + T+   G GGQHVN T S VR+ H  +G+  +C
Sbjct: 181 TSFAAIDVLPELPDDIEIVIKDTDYEVQTFSTGGPGGQHVNKTQSGVRLIHK-SGIRAEC 239

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMV 323
           +  RSQHKNKA+A  ML+ +L  +E QKR   A     +K EI +G QIRSYVLQPY +V
Sbjct: 240 RMGRSQHKNKAEALKMLQTRLEAVEEQKRMGDAVKSYDAKGEIAFGSQIRSYVLQPYTLV 299

Query: 324 KDLR--TNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +D R   +++  + +DVLDG+ D FM A L  K
Sbjct: 300 RDERDGIDVKTPAVNDVLDGNFDQFMHAYLRHK 332


>gi|73748899|ref|YP_308138.1| peptide chain release factor 1 [Dehalococcoides sp. CBDB1]
 gi|147669660|ref|YP_001214478.1| peptide chain release factor 1 [Dehalococcoides sp. BAV1]
 gi|289432895|ref|YP_003462768.1| peptide chain release factor 1 [Dehalococcoides sp. GT]
 gi|119361532|sp|Q3ZYA9|RF1_DEHSC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039969|sp|A5FQC5|RF1_DEHSB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|73660615|emb|CAI83222.1| peptide chain release factor 1 [Dehalococcoides sp. CBDB1]
 gi|146270608|gb|ABQ17600.1| bacterial peptide chain release factor 1 (bRF-1) [Dehalococcoides
           sp. BAV1]
 gi|288946615|gb|ADC74312.1| peptide chain release factor 1 [Dehalococcoides sp. GT]
          Length = 355

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 98/345 (28%), Positives = 172/345 (49%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N  +R   +  +   P +  +    + L +ER  L + +   +  +    +      L
Sbjct: 5   LENCEKRFIEIEEEISKPEVINDARLVRTLAQERADLQDKVEMYRRYKTMAKELEEAKNL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLE----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +       ++ ++       E   FE L     D     +E+ AG GG E+ 
Sbjct: 65  LESEKDEDMRGMVRGEIENLEKSLTDLYEQMTFELLPKDPNDDKSIIMEIRAGTGGDEAG 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A+ L +MY R+A  + +KTE ++I+      IK     + G  A+  LK E+GVHR+ 
Sbjct: 125 LFASDLYKMYIRYALLKNWKTEVIDINGNVAGIIKEVVFEVNGKGAFSRLKYERGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS +++ V P   + ++I+I+  + R+D + +SGAGGQ+V    +A+R
Sbjct: 185 RVPQTEASGRIHTSTATVAVLP-QVEEVDIDINMDEVRVDIFHSSGAGGQNVQKVATAIR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA-NIGESSKTEIGWGR 310
           +TH+PTG+VV CQ ERSQ KNK +A+ +LRA+L ELE  K +E       +   +     
Sbjct: 244 LTHMPTGLVVCCQDERSQLKNKNKAFAVLRARLMELEQSKVDEERTESRRAQVGQADRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   + D R  +   +   +L+G LD+ +      ++
Sbjct: 304 KIRTYNF-PQDRLTDHRIGLTAHNLPHILEGYLDEIIDTLATHEQ 347


>gi|330995510|ref|ZP_08319414.1| peptide chain release factor 1 [Paraprevotella xylaniphila YIT
           11841]
 gi|329575422|gb|EGG56964.1| peptide chain release factor 1 [Paraprevotella xylaniphila YIT
           11841]
          Length = 370

 Score =  205 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 94/364 (25%), Positives = 162/364 (44%), Gaps = 20/364 (5%)

Query: 7   LNCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           +     + D  +  V R   + T   DP++  +      L +E + L + +   KE  D 
Sbjct: 1   MAENNSILDKLEGLVSRYEEVGTLITDPNVISDQKRYVKLTKEYKDLGDIMKARKEYMDS 60

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEV 121
           L       E+   EDD  + +   + +   +  +   +       + +   D  +  +E+
Sbjct: 61  LQTLQDAKEMLAIEDDPEMKEMAREEMAAAEKHIPEMEERIKLLLVPADPEDDKNVIMEI 120

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
             G GG E+  +A  L RMYT++ E + +K       +G   G K     + G   YG L
Sbjct: 121 RGGTGGDEAALFAGDLFRMYTKYCEMKGWKIAISSFTEGAAGGFKEIIFSVTGEKVYGTL 180

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   ++  R HTS +++ V P   +     I+E + + DT+R+SGAGGQ
Sbjct: 181 KYESGVHRVQRVPATETQGRVHTSAATVAVLPEAQEFDVE-INEGEIKWDTFRSSGAGGQ 239

Query: 242 HVNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           +VN  +S VR  ++           ++++C + R Q KNK +A   LR  +Y+ E QK  
Sbjct: 240 NVNKVESGVRARYLWKNPNTGETEEILIECTETRDQPKNKERALARLRTFIYDKEHQKY- 298

Query: 294 EIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            I +I    KT +  G +   IR+Y   P   + D R      +    +DG++ D +   
Sbjct: 299 -IDDIANRRKTMVSTGDRSAKIRTYNY-PQSRITDHRIGYNMQNLPSFMDGNIQDCIDQL 356

Query: 351 LAIK 354
              +
Sbjct: 357 TVAE 360


>gi|257064123|ref|YP_003143795.1| bacterial peptide chain release factor 1 (bRF-1) [Slackia
           heliotrinireducens DSM 20476]
 gi|256791776|gb|ACV22446.1| bacterial peptide chain release factor 1 (bRF-1) [Slackia
           heliotrinireducens DSM 20476]
          Length = 352

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 117/346 (33%), Positives = 170/346 (49%), Gaps = 12/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               V     L  K  DP +  +  E   L +E       +   +E      D      +
Sbjct: 5   LSKIVAGYKELEQKLGDPAVLADQKEYTRLSKEYSKQGPLVEKAREYLQACEDIDDAKSM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D     QET    +       E  +F  +    AD  D  +E+   AGG E+  +A
Sbjct: 65  LGDADMREFAQETIAECEAKLPGLEEDIKFMLIPEDPADEKDIIVEIRGAAGGDEAAIFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L +MY R+ E +++K E +++   E  G K     +KG + Y  +K E GVHR+ R+ 
Sbjct: 125 GDLYKMYARFCESQRWKIETMDVSASEAGGYKEIQFKVKGDHVYSLMKFESGVHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   D I++EI+E+D RID YRA G GGQ VNTTDSAVRITH
Sbjct: 185 KTESQGRIHTSTATVAVLP-EADEIDVEINENDLRIDVYRAGGPGGQCVNTTDSAVRITH 243

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +P+G+VVQ Q ++SQ +NK  A  +LR++LYE  L +++  A  G     +IG G    +
Sbjct: 244 LPSGLVVQSQDQKSQLQNKIAAMAVLRSRLYEKMLAEQQ--AAEGAERLAQIGSGDRAEK 301

Query: 312 IRSYVLQPYQMVKDLRTNIE-KTSPSDVLDGD-LDDFMKATLAIKK 355
           IR+Y   P   V D R       +   VL GD L D + A  A  +
Sbjct: 302 IRTYN-APQDRVTDHRIGYNGTYN--GVLLGDGLGDLITALQAADR 344


>gi|184200614|ref|YP_001854821.1| peptide chain release factor 1 [Kocuria rhizophila DC2201]
 gi|238689221|sp|B2GLX4|RF1_KOCRD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|183580844|dbj|BAG29315.1| peptide chain release factor 1 [Kocuria rhizophila DC2201]
          Length = 369

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 109/338 (32%), Positives = 168/338 (49%), Gaps = 10/338 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            +   + L  +  DP +  +   A+ L R    L+  +   + ++    D     EL   
Sbjct: 8   LLDEHAQLQRELADPAVHADAGRARKLGRRYSELNGIVEAHRRVERLSEDLEAARELGSM 67

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           + + +   +  +    +  E   ++   +     D  +  LEV AG GG ES  +A  LL
Sbjct: 68  DPELAAEVKPLEEELAVAREALRRKL--VPRDPDDGRNVILEVKAGEGGDESALFAGDLL 125

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI------KGPNAYGWLKGEQGVHRLVR 192
           RMY R+AE+   KTE L     E  G K   L +          A+   K E GVHR+ R
Sbjct: 126 RMYMRFAEQSGLKTEILSSTPTELGGYKDVQLAVKGSSSDPSEGAWARFKYEGGVHRVQR 185

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS + + V+P VD+  EI+IS++D +ID YR+SG GGQ VNTTDSAVRI
Sbjct: 186 VPVTESQGRVHTSAAGVLVFPEVDEPDEIDISQNDLKIDVYRSSGPGGQSVNTTDSAVRI 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311
           TH+PTG+VV  Q E+SQ +N+  A  +LRA+L   + ++ +        S+   +    +
Sbjct: 246 THVPTGIVVSMQNEKSQLQNREAAMRVLRARLLAHQQEQIDAENAAARKSQVRTVDRSER 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           IR+Y   P   + D RT  +  +   VLDG L+  + +
Sbjct: 306 IRTYNF-PENRIADHRTGYKAYNLDHVLDGALEPVIAS 342


>gi|189182919|ref|YP_001936704.1| peptide chain release factor 1 [Orientia tsutsugamushi str. Ikeda]
 gi|238692229|sp|B3CQD1|RF1_ORITI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189179690|dbj|BAG39470.1| peptide chain release factor RF-1 [Orientia tsutsugamushi str.
           Ikeda]
          Length = 359

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 124/345 (35%), Positives = 182/345 (52%), Gaps = 14/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +Q+   L        L  +  E  ++ +E  +L   I  +        +   L ++
Sbjct: 7   LNKILQKYQDLEADLNGGKL--DNKELALISKEYSNLKPIIEKLNRYLKAHENIKYLQQV 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +       L      +   + E           D  +A +EV AG GG E+ 
Sbjct: 65  IDTEQDLELKSIAEVELYDTLNYLPKLEEEVKISLLPKESDDHKNAIIEVRAGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MY R+AE++K+K E L I D E  G K A+ LI G   +  LK E GVHR+ 
Sbjct: 125 LFAASLFQMYNRYAERKKWKFELLSISDTEIGGYKEASALISGNGVFANLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +SN R HTS +++ V P   + ++++I   D +IDTYRASGAGGQHVNTTDSAVR
Sbjct: 185 RIPKTESNGRIHTSAATVVVLP-EAEEVDVKIDAKDLKIDTYRASGAGGQHVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTGVVV  Q E+SQHKNKA+A  +L A+LY+LE QK ++   +    K ++G G  
Sbjct: 244 ITHIPTGVVVSQQDEKSQHKNKAKAMKILYARLYDLEKQKSQQEQAMS--RKVQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
             +IR+Y   P   V D R N+      +++ +G LD+ +   ++
Sbjct: 302 SERIRTYNY-PQGRVTDHRINLTLYKIEEIIQEGKLDEIINNLIS 345


>gi|33241132|ref|NP_876074.1| peptide chain release factor 1 [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
 gi|81663962|sp|Q7V9Z0|RF1_PROMA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33238662|gb|AAQ00727.1| Protein chain release factor A [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
          Length = 365

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 105/348 (30%), Positives = 170/348 (48%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
            + A    + L  +  DP +  +  + + + RER  L+  +   KE+Q       +   L
Sbjct: 10  LETASATFNNLELQLADPDVASDPKKLETIARERARLEPLVLDYKELQAIDLEYKEAKEL 69

Query: 73  LELALEEDDCSI--LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           L  +  + +      +E     +  K  V       L     D     LE+ AGAGG E+
Sbjct: 70  LRQSKSDKEMEALAQEELIRLEELEKDLVNRLTLALLPKDPRDERSVMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+  K  +  +A+   + +  G +   + +KG   +  LK E GVHR+
Sbjct: 130 CIWAGDLARMYERYGLKVGWVVKAMSATEADLGGFRELIISVKGKAVFSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +E+++  +D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADPVEVKLEPTDLEISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C QERSQ +N+ +A  +LRAKL E E++  E  A    +   ++G G 
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERALEILRAKLLEREIE--EANAKERSARLAQVGTGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R  +       VL+G+LDD + A +A ++
Sbjct: 307 RSEKIRTYNYKD-NRTTDHRLGVNFP-LETVLEGELDDLIGACIAEEQ 352


>gi|300871300|ref|YP_003786173.1| peptide chain release factor 1 [Brachyspira pilosicoli 95/1000]
 gi|300689001|gb|ADK31672.1| peptide chain release factor 1 [Brachyspira pilosicoli 95/1000]
          Length = 358

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 113/348 (32%), Positives = 182/348 (52%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +     + +  K  D ++ ++    + LM+++  +++ ++  K+++  L +     E+
Sbjct: 7   LSSVENTYNDIVDKLNDANI-KDNRVIQDLMKKKSEIEDIVNEYKKLKTVLKEIEDANEM 65

Query: 76  ALEEDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
               D    L+        +  Q+ +  +   +   L   + D  +  +E+  G GG ES
Sbjct: 66  LNHSDTDKELKNMALLEIEELNQKKENIINDLRLLLLPKDKNDGKNIIVEIRVGTGGDES 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +   L RMY+R+ E+  FK E ++I   E  G K     + G NAY  LK E G HR+
Sbjct: 126 ALFVGDLFRMYSRFIERANFKMEIIDISPTELGGYKEVIFSVSGKNAYRTLKFESGTHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            RI   +S  R HTS S++ + P  ++S  I I + D R+D +R+SG GGQ VNTTDSAV
Sbjct: 186 QRIPATESGGRIHTSASTVAIMPEAEESDVI-IKDEDIRVDIFRSSGPGGQSVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VVQCQ E+SQHKNKA+A  +LRA++YE E  +R   A   +  + +IG G 
Sbjct: 245 RITHLPTGLVVQCQDEKSQHKNKAKALKVLRARIYEKEEAER--KAKEDKERRDKIGSGD 302

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+        +DG++ +   A    ++
Sbjct: 303 RSERIRTYNF-PQNRVTDHRINVTLYKLDRFMDGEITEITDALFKKEQ 349


>gi|218672481|ref|ZP_03522150.1| peptide chain release factor 1 [Rhizobium etli GR56]
          Length = 352

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 112/344 (32%), Positives = 179/344 (52%), Gaps = 18/344 (5%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   +  +    P           L  E   L   ++ I+  +  + +   L  L 
Sbjct: 11  ELERRFDEIEARMSAGPA----ADVYVKLASEYSELQPVVTKIRAYEKAVAELADLDTLL 66

Query: 77  LEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            ++     +++ ++       +RI+   +  Q   L    AD   A LE+ AG GG+E+ 
Sbjct: 67  EDKSVDREMRDLAELELPEVKERIEALEQEMQILLLPKDAADEKSAILEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A ++ +K E L   +GE  G K     I G   +  LK E GVHR+ 
Sbjct: 127 LFAGDLFRMYERFAAEKSWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + I+IEI   D RIDT R+SGAGGQHVNTTDSAVR
Sbjct: 187 RVPETEAGGRIHTSAATVAVLP-EAEEIDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+P+G+VV    E+SQH+N+A+A  +LR++LY+ E Q+    +      K+++G G  
Sbjct: 246 ITHLPSGIVVTSS-EKSQHQNRAKAMQVLRSRLYDAERQR--ADSERSADRKSQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       +++G++++ + A +A
Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVDALMA 345


>gi|329116672|ref|ZP_08245389.1| peptide chain release factor 1 [Streptococcus parauberis NCFD 2020]
 gi|326907077|gb|EGE53991.1| peptide chain release factor 1 [Streptococcus parauberis NCFD 2020]
          Length = 359

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 93/348 (26%), Positives = 161/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E       +   ++ +D +       E+
Sbjct: 7   LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEAGTRETVDVYRKYKDVIQAIADAEEM 66

Query: 76  ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    S ++E +    +      +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKDSGGDSDIEEMAREELKESKAAKETYEEQLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKFAESQNWRFEVMEATYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ + P   + ++ +I   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLIMP-EVEEVDYQIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+ HIPT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RMVHIPTNIKVEMQEERTQQKNRDKAIKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEIVDALVLYDQ 350


>gi|300361282|ref|ZP_07057459.1| peptide chain release factor RF2 [Lactobacillus gasseri JV-V03]
 gi|300353901|gb|EFJ69772.1| peptide chain release factor RF2 [Lactobacillus gasseri JV-V03]
          Length = 270

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 137/255 (53%), Positives = 181/255 (70%)

Query: 99  VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
               +   LLS + D ++A +E+H GAGGTE+ DWA+MLLRMY R+A     K E  +  
Sbjct: 8   FHDYELSLLLSDKYDQHNALMEIHPGAGGTEAMDWADMLLRMYQRYAANHDLKFEIEDYE 67

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
            GEEAG+KS ++ I+G NA+G LK E GVHRLVRISP+DS  RRHTSF+S+ V P +D S
Sbjct: 68  PGEEAGVKSVSIRIQGKNAFGLLKSENGVHRLVRISPFDSAKRRHTSFASVEVIPEIDQS 127

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           IE++I+  D RID YR+SGAGGQH+N T SAVRITH+PTG+V   Q +RSQ +N+  A N
Sbjct: 128 IEVDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQLQNRETAMN 187

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           MLRAKL++LE +K+++     + ++ EIG+G QIRSYV  PY MVKD RTN E +  + V
Sbjct: 188 MLRAKLFQLEEEKKKKQTEELKGNQKEIGFGSQIRSYVFHPYNMVKDHRTNFETSDVNGV 247

Query: 339 LDGDLDDFMKATLAI 353
           +DG LD+F+ A L  
Sbjct: 248 MDGKLDNFIYAYLQW 262


>gi|296533064|ref|ZP_06895708.1| peptide chain release factor RF1 [Roseomonas cervicalis ATCC 49957]
 gi|296266608|gb|EFH12589.1| peptide chain release factor RF1 [Roseomonas cervicalis ATCC 49957]
          Length = 351

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 114/345 (33%), Positives = 173/345 (50%), Gaps = 16/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72
            D  + R   L    E         +   L +E   L+  ++ ++ +   +    +   L
Sbjct: 7   LDRLLYRADELRALLETAE----GAQVGALAKELSELEPLVAQVEALRAAERARDEAEAL 62

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L      +          +   +           L    AD+  A LE+   AGG E+  
Sbjct: 63  LADPEMRELAEAEYYAQRDAVPVLERELRL--MLLPKDAADAGSAILEIRPAAGGDEAGL 120

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L   Y ++A  R ++   L+  + E  GIK A   ++G   +  LK E GVHR+ R
Sbjct: 121 FAAELFAAYQKYAAARGWRFGVLDYDESELGGIKGAVAEVEGQGVFARLKFESGVHRVQR 180

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P  +D ++++I+ESD RIDTYRASGAGGQHVN TDSAVRI
Sbjct: 181 VPATETQGRIHTSTVTVAVLPQAED-VDVQINESDLRIDTYRASGAGGQHVNKTDSAVRI 239

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG VV  Q+ERSQHKN+A+A  +LRA+LY  E Q+ + +A+     + ++G G   
Sbjct: 240 THIPTGTVVAMQEERSQHKNRAKAMKVLRARLY--EAQRSQAVASRSADRRAQVGTGDRS 297

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +IR+Y   P   V D R  +       V+ G++DD + A +A  
Sbjct: 298 ERIRTYNF-PQGRVTDHRIGLTLHKIDRVMQGEMDDIIDALIAED 341


>gi|224283865|ref|ZP_03647187.1| peptide chain release factor 1 [Bifidobacterium bifidum NCIMB
           41171]
 gi|310287872|ref|YP_003939130.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bifidobacterium
           bifidum S17]
 gi|311064752|ref|YP_003971477.1| peptide chain release factor 1 (RF-1) PrfA [Bifidobacterium bifidum
           PRL2010]
 gi|313141020|ref|ZP_07803213.1| peptide chain release factor 1 [Bifidobacterium bifidum NCIMB
           41171]
 gi|309251808|gb|ADO53556.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bifidobacterium
           bifidum S17]
 gi|310867071|gb|ADP36440.1| PrfA Bacterial Peptide Chain Release Factor 1 (RF-1)
           [Bifidobacterium bifidum PRL2010]
 gi|313133530|gb|EFR51147.1| peptide chain release factor 1 [Bifidobacterium bifidum NCIMB
           41171]
          Length = 362

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 105/349 (30%), Positives = 165/349 (47%), Gaps = 16/349 (4%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
             A++    +  +   P +  N  + + L R    L   +S  +       D     E+A
Sbjct: 10  QTALEEYQSIEQQMASPEVVTNPDKMRKLGRRHAELGAIVSAYQSYTAVRDDLEAAREMA 69

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
            E+ + +   +  +       E        +     D+ D  +E+ AG GG E+  +A  
Sbjct: 70  GEDPEFADEAKRLEAELPAAEEKLRNAL--IPRDPDDARDVIMEIKAGTGGEEAALFAGD 127

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHR 189
           LLRMY R+AEKR +       +  E  G+K   + I            +  LK E GVHR
Sbjct: 128 LLRMYLRYAEKRGWAVTVQSENTTELGGVKDVQIAIRAKGTPAPEDGVWASLKYEGGVHR 187

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           + RI   +S  R  TS + + V+P   +D  EIEI   D +ID + +SG GGQ VNTT S
Sbjct: 188 VQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYS 247

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI-- 306
           AVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++  +E A   +   +++  
Sbjct: 248 AVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRS 305

Query: 307 -GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                +IR+Y   P   + D RTN +  +   VLDGDL   + + +   
Sbjct: 306 LDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 353


>gi|56751121|ref|YP_171822.1| peptide chain release factor 2 [Synechococcus elongatus PCC 6301]
 gi|56686080|dbj|BAD79302.1| peptide chain release factor RF-2 [Synechococcus elongatus PCC
           6301]
          Length = 304

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 141/294 (47%), Positives = 199/294 (67%)

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           + Q    D   +LEL   E D ++ +E   N+QR++ E++  + + LLSG  D+  A L 
Sbjct: 2   DWQQLDADITAILELLAIEPDPALFEEAETNVQRLQRELDQWELQQLLSGPYDAEGAILS 61

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           ++AGAGGT++QDWA MLLRMYTRWAE + +K    E+ +GEEAGIKS TL I+G  AYG+
Sbjct: 62  INAGAGGTDAQDWAEMLLRMYTRWAEDQGYKVRITELSEGEEAGIKSVTLEIEGKYAYGY 121

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E+G HRLVRISP+++N +R TSF+ + V PV+D  I++EI E D  I T RA G GG
Sbjct: 122 LKAEKGTHRLVRISPFNANDKRQTSFAGVEVMPVLDTDIDLEIPEKDLEITTSRAGGKGG 181

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN  ++AVRI H+PTG+ V+C +ERSQ +NK +A  +LRAKL  +  +++ +      
Sbjct: 182 QNVNKVETAVRIVHLPTGLAVRCTEERSQLQNKEKALVILRAKLLVVLQEQKAKEVAEIR 241

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               E  WG QIR+YV  PYQ+VKDLRT +E  + +DV++GDL+ F++A L   
Sbjct: 242 GDMVEAAWGNQIRNYVFHPYQLVKDLRTGVETKAIADVMNGDLNPFIQAYLRQD 295


>gi|42520141|ref|NP_966056.1| peptide chain release factor 1 [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|58698355|ref|ZP_00373269.1| peptide chain release factor 1 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|81652805|sp|Q73IC2|RF1_WOLPM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|42409878|gb|AAS13990.1| peptide chain release factor 1 [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|58535109|gb|EAL59194.1| peptide chain release factor 1 [Wolbachia endosymbiont of
           Drosophila ananassae]
          Length = 359

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 123/348 (35%), Positives = 189/348 (54%), Gaps = 15/348 (4%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           +  +  ++ + +    E+P       E   L +E   L   I  I E      +   L E
Sbjct: 6   NLQDLKKKFNDIERNLENPTNLS-QKEFITLSKEYSELRPIIKIIDEYNTLKEEISDLEE 64

Query: 75  LALEEDDCSILQETSDNLQRIK------LEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           +  +E+    ++E +      K            +   L   E DS +A LE+ AG GG 
Sbjct: 65  IMKDENSEGDIKELAKEEFFEKHKVLLPKIKAKLKLALLPKDEDDSRNAILEIRAGTGGE 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A ML RMY ++AE+R +K E + I +    G K A+ LI G   +  LK E GVH
Sbjct: 125 EAALFAAMLFRMYQKYAERRNWKFEPISISNTGIGGYKEASALINGTEVFARLKFESGVH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S+ R HTS +++ + P   + ++ +I E D RID YR+SG GGQ VNTTDS
Sbjct: 185 RVQRVPETESSGRLHTSAATVAILP-EVEEVDFKIEEKDLRIDVYRSSGPGGQSVNTTDS 243

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+TH+PTG+VV  Q E+SQHKNKA+A  +LRA+LYE+E QK+E   +     K++IG 
Sbjct: 244 AVRVTHLPTGIVVIQQDEKSQHKNKAKALKVLRARLYEIERQKKEMERSTM--RKSQIGS 301

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           G    +IR+Y   P   + D R N+       ++ +G+LD+F++A ++
Sbjct: 302 GDRSERIRTYNF-PQSRITDHRINLTSHRLEQIIKEGELDEFIEALIS 348


>gi|225870517|ref|YP_002746464.1| peptide chain release factor 1 [Streptococcus equi subsp. equi
           4047]
 gi|254790898|sp|C0MC15|RF1_STRE4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|225699921|emb|CAW93851.1| peptide chain release factor 1 [Streptococcus equi subsp. equi
           4047]
          Length = 360

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 95/348 (27%), Positives = 160/348 (45%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E       ++  ++ +  +       E+
Sbjct: 7   LQAVEDRYEELGELLSDPEVVSDTKRFMALSKEEASTRETVAAYRQYKAIIQSIDDAEEM 66

Query: 76  ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E      ++E +    +      +   +  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKEAGGDPDIEEMAKEELKEAKSAKEAYEDKLKLLLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLAMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D RID Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEIVDALVLYDQ 350


>gi|213969083|ref|ZP_03397222.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudomonas
           syringae pv. tomato T1]
 gi|213926081|gb|EEB59637.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudomonas
           syringae pv. tomato T1]
          Length = 280

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 160/279 (57%), Positives = 211/279 (75%), Gaps = 1/279 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           ++ EE+D + + + +  ++R++  +E  +F  + SGE D N+AYL++ AG+GGTE+QDWA
Sbjct: 1   MSAEEEDQAAVDDVAAEVERLRASLEKLEFRRMFSGEMDPNNAYLDIQAGSGGTEAQDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           N+LLRMY RWA+KR F    +E+  GE AGIK AT+ IKG  A+GWL+ E GVHRLVR S
Sbjct: 61  NILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DS +RRHTSFS+++V P +DD+IEI+I+ SD RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 121 PFDSGNRRHTSFSAVFVSPEIDDNIEIDINPSDLRIDTYRSSGAGGQHVNTTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           +PT  VV CQ ERSQH NK  A  MLRA+LYE E+QKR   +   E +K++IGWG QIRS
Sbjct: 181 VPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTKSDIGWGHQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           YVL     +KDLRTNIE++    VLDGD+D+++ A+L  
Sbjct: 241 YVLD-ASRIKDLRTNIERSDCDKVLDGDIDEYLIASLKQ 278


>gi|91215788|ref|ZP_01252758.1| putative peptide chain release factor [Psychroflexus torquis ATCC
           700755]
 gi|91186254|gb|EAS72627.1| putative peptide chain release factor [Psychroflexus torquis ATCC
           700755]
          Length = 316

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 133/307 (43%), Positives = 199/307 (64%), Gaps = 2/307 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+        +      +  + D  +L E   E D      +           +E  +F+
Sbjct: 1   MQAINDEKQWVKSFDFAKQLVEDLNVLFEFFEEGDVSEDEIKEKYAEA--LELIEDLEFK 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LS E+D   A L++ AGAGGTES DWA ML+RMY  WA++R FK   L    G+ AGI
Sbjct: 59  NMLSEESDPLTAILQITAGAGGTESCDWAEMLMRMYIMWADRRNFKIRELNHQGGDVAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ TL I+G  A+GWLKGE GVHRLVRISP+DSN++RHTSF+S++VYP+VDD+IEI+I+ 
Sbjct: 119 KTVTLEIEGEYAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIDINP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           S+ + +  R+ GAGGQ+VN  ++   +TH P+G+V+   + RSQ +N+ +A  ML+++LY
Sbjct: 179 SEIKWEFARSGGAGGQNVNKVETKAILTHYPSGIVIHNSETRSQLENRQKAMQMLKSQLY 238

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           E+EL+K++   +  ES K  I WG QIR+YV+ PY++VKD+RT  E  +  D+++G +D 
Sbjct: 239 EIELKKQQAARSEIESEKKSIEWGSQIRNYVMHPYKLVKDVRTGFESGNVDDIMNGHIDS 298

Query: 346 FMKATLA 352
           F+K+ L 
Sbjct: 299 FLKSYLM 305


>gi|331000229|ref|ZP_08323913.1| peptide chain release factor 2 [Parasutterella excrementihominis
           YIT 11859]
 gi|329572395|gb|EGG54048.1| peptide chain release factor 2 [Parasutterella excrementihominis
           YIT 11859]
          Length = 280

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 150/279 (53%), Positives = 205/279 (73%), Gaps = 1/279 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +A EEDD + L+    ++  +K EVE+ +F+ + + E D  + +LE+ AGAGGTE+QDWA
Sbjct: 1   MAKEEDDDASLEAVEADINNLKKEVEHLEFQRMFNQEHDEANCFLEIQAGAGGTEAQDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           +ML RMY ++AE++ FK E +E  +G+ AGIK  T+ I G  AYGWL+ E G+HRLVR S
Sbjct: 61  SMLERMYIKFAERQSFKPEIVEETEGDVAGIKGCTIKITGDYAYGWLRTETGIHRLVRKS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DSN+RRHTSF+S++V P VDDS EIE++ +D RIDT+RASGAGGQH+  TDSAVRITH
Sbjct: 121 PFDSNARRHTSFASVFVVPEVDDSFEIEVNPADLRIDTFRASGAGGQHIQKTDSAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           IPTG+V   Q  RSQH+NK +A  +L+++LYE EL+KR+      E +K++I WG QIRS
Sbjct: 181 IPTGIVAVSQTSRSQHQNKEEAMTILKSRLYEAELRKRQATQQALEDNKSDISWGHQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           YVL     VKDLRTN+E  + + VLDG L+ F++A+L  
Sbjct: 241 YVLD-QSRVKDLRTNVETGNTTAVLDGALESFIEASLKQ 278


>gi|55820816|ref|YP_139258.1| peptide chain release factor 1 [Streptococcus thermophilus LMG
           18311]
 gi|55822719|ref|YP_141160.1| peptide chain release factor 1 [Streptococcus thermophilus
           CNRZ1066]
 gi|116627620|ref|YP_820239.1| peptide chain release factor 1 [Streptococcus thermophilus LMD-9]
 gi|81559540|sp|Q5M0B7|RF1_STRT1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|81560720|sp|Q5M4W4|RF1_STRT2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|122267782|sp|Q03L79|RF1_STRTD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|55736801|gb|AAV60443.1| peptide chain release factor 1 [Streptococcus thermophilus LMG
           18311]
 gi|55738704|gb|AAV62345.1| peptide chain release factor 1 [Streptococcus thermophilus
           CNRZ1066]
 gi|116100897|gb|ABJ66043.1| bacterial peptide chain release factor 1 (bRF-1) [Streptococcus
           thermophilus LMD-9]
 gi|312278142|gb|ADQ62799.1| Peptide chain release factor 1 [Streptococcus thermophilus ND03]
          Length = 359

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 163/348 (46%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L RE  +    +   +E +  + +     E+
Sbjct: 7   LQAVEDRYEELGELLSDPEVVSDTKRFMELSREEANTRETVIAYREYKQVIQNISDAEEM 66

Query: 76  ALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E    + L+E +    +      +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKEASGDADLEEMAKEELKKSKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLAMYQKYAETQGWRFEVMEASYNGVGGIKEVVAMVSGESVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P V++    EI   D R+D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMPEVEEME-YEIDPKDLRVDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ +G G 
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKALKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILAGKMDEVIDALVLYDQ 350


>gi|118619169|ref|YP_907501.1| peptide chain release factor 1 [Mycobacterium ulcerans Agy99]
 gi|166223575|sp|A0PUL1|RF1_MYCUA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118571279|gb|ABL06030.1| peptide chain release factor 1 PrfA [Mycobacterium ulcerans Agy99]
          Length = 357

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 109/332 (32%), Positives = 158/332 (47%), Gaps = 9/332 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L     DP L     EA+   R    L   ++  +++     D     EL
Sbjct: 8   IDVLLAEHADLERALADPELHSRPDEARKAGRRFARLARIVATYRKLVAAREDLETAHEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A  ++         +                      D++D  LEV +G GG ES  +A 
Sbjct: 68  AATDESFVAEAAELEARVAELDSQLTDML--APRDPHDADDIVLEVKSGEGGEESALFAA 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-----KGPNAYGWLKGEQGVHRL 190
            L RMY R+AE+  +    L     +  G + ATL I          +  +K E GVHR+
Sbjct: 126 DLARMYIRYAERHGWTVTVLGETTSDLGGYRDATLAIASKGDTADGVWSRMKFEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + VYP  ++  E++I ESD RID YR+SG GGQ VNTTDSAV
Sbjct: 186 QRVPVTESQGRVHTSAAGVLVYPEPEEVGEVQIDESDLRIDVYRSSGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG+VV CQ ERSQ +NK +A  +L A+L  +  ++    A+   +S+   +   
Sbjct: 246 RITHLPTGIVVTCQNERSQLQNKIRAMQVLGARLQAIAEERAMADASADRASQIRTVDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
            +IR+Y   P   V D R   +  +   VLDG
Sbjct: 306 ERIRTYNF-PENRVTDHRIGYKSHNLDQVLDG 336


>gi|227498082|ref|ZP_03928255.1| peptide chain release factor RF1 [Actinomyces urogenitalis DSM
           15434]
 gi|226832520|gb|EEH64903.1| peptide chain release factor RF1 [Actinomyces urogenitalis DSM
           15434]
          Length = 366

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 165/344 (47%), Gaps = 11/344 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            ++    +  +  DP +  +    + L R    L   +S  +  Q    D    +ELA  
Sbjct: 15  LLEEYFGIEREMADPAISSDPGAMRRLGRRYAELGRVVSAYRAWQAAQADYDDAVELAEG 74

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           + D +              E   +    +     D+ D  +EV AG GG ES  +A+ L 
Sbjct: 75  DPDFAAEVPGLQAAAETATEHLREVL--VPRDPDDARDVIIEVKAGEGGEESALFASDLA 132

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLV 191
           RMYTR+AE+  +  E L+  D +  G K   L +            +  LK E GVHR+ 
Sbjct: 133 RMYTRYAERMGWAVEVLDATDSDLGGYKDVRLAVKARSAVEPQDGVWAHLKYEGGVHRVQ 192

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS + + V P VDD  E+EI  +D RID +R+SG GGQ VNTTDSAVR
Sbjct: 193 RVPVTESQGRIHTSAAGVLVMPEVDDPGELEIDPNDLRIDVFRSSGPGGQSVNTTDSAVR 252

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGR 310
           ITH+PTG+VV  Q E+SQ +NK  A  +LRA+L      +          S+   +    
Sbjct: 253 ITHLPTGIVVSMQNEKSQLQNKEAALRVLRARLLAERAAQAAAEEAEARRSQVRTVDRSE 312

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   + D RT  +  + S VLDGDL   + + +A+ 
Sbjct: 313 RIRTYNF-PENRITDHRTGYKAYNLSTVLDGDLGPVIDSAIAMD 355


>gi|240169515|ref|ZP_04748174.1| peptide chain release factor 1 [Mycobacterium kansasii ATCC 12478]
          Length = 357

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 111/332 (33%), Positives = 160/332 (48%), Gaps = 9/332 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L     DP L  N   A+   R    L   ++  +++     D     EL
Sbjct: 8   IDVLLAEHADLEHALSDPELHSNPGAARKAGRRFALLAPIVATHRKLVAAREDLETAREL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A  +D         +                      D++D  LEV +G GG ES  +A 
Sbjct: 68  AASDDSFVAEAAELEARVAELDAQLTDML--APRDPHDADDIVLEVKSGEGGEESALFAA 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-----KGPNAYGWLKGEQGVHRL 190
            L RMY R+AE+R +    L+    +  G K ATL I          +  +K E GVHR+
Sbjct: 126 DLARMYIRYAERRGWTVTVLDETTSDLGGYKDATLAIASKGDSVDGVWSRMKFEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + VYP  ++  E++I ESD RID YR+SG GGQ VNTTDSAV
Sbjct: 186 QRVPVTESQGRVHTSAAGVLVYPEPEEVGEVQIDESDLRIDVYRSSGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG+VV CQ ERSQ +NK +A  +L A+L  +  ++    A+   +S+   +   
Sbjct: 246 RITHLPTGIVVTCQNERSQLQNKTRALQVLAARLQSMAEEQALADASADRASQIRTVDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
            +IR+Y   P   + D R   +  +   VLDG
Sbjct: 306 ERIRTYNF-PENRITDHRIGYKAYNLDQVLDG 336


>gi|81299215|ref|YP_399423.1| peptide chain release factor 2 [Synechococcus elongatus PCC 7942]
 gi|81168096|gb|ABB56436.1| bacterial peptide chain release factor 2 (bRF-2) [Synechococcus
           elongatus PCC 7942]
          Length = 304

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 140/294 (47%), Positives = 199/294 (67%)

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           + Q    D   +LEL   E D ++ +E   N+QR++ E++  + + LLSG  D+  A L 
Sbjct: 2   DWQQLDADITAILELLAIEPDPALFEEAETNVQRLQRELDQWELQQLLSGPYDAEGAILS 61

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           ++AGAGGT++QDWA MLLRMYTRWAE + +K    E+ +GEEAGIKS TL I+G  AYG+
Sbjct: 62  INAGAGGTDAQDWAEMLLRMYTRWAEDQGYKVRITELSEGEEAGIKSVTLEIEGKYAYGY 121

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E+G HRLVRISP+++N +R TSF+ + V PV+D  I++EI E D  I T RA G GG
Sbjct: 122 LKAEKGTHRLVRISPFNANDKRQTSFAGVEVMPVLDTDIDLEIPEKDLEITTSRAGGKGG 181

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN  ++AVRI H+PTG+ V+C +ERSQ +NK +A  +L+AKL  +  +++ +      
Sbjct: 182 QNVNKVETAVRIVHLPTGLAVRCTEERSQLQNKEKALVILKAKLLVVLQEQKAKEVAEIR 241

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               E  WG QIR+YV  PYQ+VKDLRT +E  + +DV++GDL+ F++A L   
Sbjct: 242 GDMVEAAWGNQIRNYVFHPYQLVKDLRTGVETKAIADVMNGDLNPFIQAYLRQD 295


>gi|124024969|ref|YP_001014085.1| peptide chain release factor 2 [Prochlorococcus marinus str.
           NATL1A]
 gi|123960037|gb|ABM74820.1| peptide chain release factor RF-2 [Prochlorococcus marinus str.
           NATL1A]
          Length = 313

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 139/308 (45%), Positives = 199/308 (64%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MR+   +   +  +   +  + D  + LEL   + D  IL E  + L+++K E++  + E
Sbjct: 1   MRQLDEVKAQLEKLITWRGAIEDANLSLELYELDLDEEILSEAHNGLEKLKQELDRWETE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSG  D   A L ++AGAGGT++QDWA MLLRMYTRWA+    K    E+ +GEEAGI
Sbjct: 61  RLLSGIYDKEGAVLSINAGAGGTDAQDWAQMLLRMYTRWADNNGMKVIINELSEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KS T+ I+G  AYG+L+ E+G HRLVRISP+++N +R TSF+ + V P +D+ +E+EI E
Sbjct: 121 KSVTIEIEGVYAYGFLQNEKGTHRLVRISPFNANGKRQTSFAGVEVMPKLDEEVELEIPE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D  I T R+ GAGGQ+VN  ++AVRI H+PTG+ V+C QERSQ +NK +A  +L++KL 
Sbjct: 181 KDLEITTSRSGGAGGQNVNKVETAVRILHVPTGIAVRCTQERSQLQNKDKAMALLKSKLM 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            + L++R            E  WG QIR+YV  PYQMVKDLRT  E T    V++G++D 
Sbjct: 241 VIALEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQMVKDLRTEQETTDVDSVMNGEIDI 300

Query: 346 FMKATLAI 353
           F+++ L  
Sbjct: 301 FIQSLLRQ 308


>gi|261880577|ref|ZP_06007004.1| peptide chain release factor RF1 [Prevotella bergensis DSM 17361]
 gi|270332696|gb|EFA43482.1| peptide chain release factor RF1 [Prevotella bergensis DSM 17361]
          Length = 369

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 90/354 (25%), Positives = 152/354 (42%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   + T   DP +  +      L +E + L + +   K   D L       ++
Sbjct: 10  LDGLESRFEEVKTLITDPSVIADQKRYVKLTKEYKDLSDIMDARKRYIDCLNAIKESKDI 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L   +      + E           D+ +  +E+ AGAGG E+ 
Sbjct: 70  MTNESDADMKEMAREELSINESLQPQLEEEIKMALVPKDPEDAKNVQMEIRAGAGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY ++ + + +      + +G   G K     + G N YG LK E GVHR+ 
Sbjct: 130 LFAGDLFNMYKKFCDTKGWSVSVTSVSEGSVGGYKEIDFAVSGDNVYGVLKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P  D      I+E D + DT+R+SGAGGQ+VN  +S VR
Sbjct: 190 RVPATETQGRMHTSAATVAVLPEADKFEVN-INEGDIKWDTFRSSGAGGQNVNKVESGVR 248

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +            ++++C + R Q KNK +A + L   +Y+ E  K   + +I    K
Sbjct: 249 LRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLYTYIYDHERSKY--LNDISSRRK 306

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           + +  G +   IR+Y   P   + D R           L GD+ D +      +
Sbjct: 307 SLVSTGDRSAKIRTYNF-PQGRITDHRIGYTTHDLQGFLGGDIQDMIDHLTVAE 359


>gi|148284270|ref|YP_001248360.1| peptide chain release factor [Orientia tsutsugamushi str. Boryong]
 gi|166223581|sp|A5CCS8|RF1_ORITB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|146739709|emb|CAM79522.1| peptide chain release factor [Orientia tsutsugamushi str. Boryong]
          Length = 359

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 124/345 (35%), Positives = 182/345 (52%), Gaps = 14/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +Q+   L        L  +  E  ++ +E  +L   I  +        +   L ++
Sbjct: 7   LNKILQKYQDLEADLNGGKL--DNKELALISKEYSNLKPIIEKLNRYLKAHENIKYLQQV 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +       L      +   + E           D  +A +EV AG GG E+ 
Sbjct: 65  IDTEQDLELKSIAEVELYDTLNYLPKLEEEVKISLLPKESDDHKNAIIEVRAGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MY ++AE++K+K E L I D E  G K A+ LI G   +  LK E GVHR+ 
Sbjct: 125 LFAASLFQMYNKYAERKKWKFELLSISDTEIGGCKEASALISGNGVFANLKFESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +SN R HTS +++ V P   + ++++I   D +IDTYRASGAGGQHVNTTDSAVR
Sbjct: 185 RIPKTESNGRIHTSAATVVVLP-EAEEVDVKIDAKDLKIDTYRASGAGGQHVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTGVVV  Q E+SQHKNKA+A  +L A+LY+LE QK ++   I    K ++G G  
Sbjct: 244 ITHIPTGVVVSQQDEKSQHKNKAKAMKILYARLYDLEKQKSKQEQAIS--RKVQVGTGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
             +IR+Y   P   V D R N+      +++ +G LD+ +   ++
Sbjct: 302 SERIRTYNY-PQGRVTDHRINLTLYKIEEIIQEGKLDEIINNLIS 345


>gi|294790651|ref|ZP_06755809.1| peptide chain release factor 1 [Scardovia inopinata F0304]
 gi|294458548|gb|EFG26901.1| peptide chain release factor 1 [Scardovia inopinata F0304]
          Length = 365

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 108/345 (31%), Positives = 166/345 (48%), Gaps = 16/345 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
                +  +   P +  N  + + L R    L   ++  ++ +    D     E A E+D
Sbjct: 15  DEYHDIERQMSQPEIASNPDKIRKLGRRHAELAQIVTAYQDYKRLSDDLDAAKEFAAEDD 74

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
             +   +  +       E        +     D+ D  +E+ AGAGG E+  +A  LLRM
Sbjct: 75  SFAAEAQRLEEKLPAAEEKLRTAL--IPRDPDDARDTIMEIKAGAGGEEAALFAGDLLRM 132

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193
           YTR+AEKR + TE +  +  E  G+K   +              +  LK E GVHR+ RI
Sbjct: 133 YTRYAEKRGWATEIMSQNMTELGGVKDIQIAFRNKGAVAPEDGVWASLKYEGGVHRVQRI 192

Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
              +S  R  TS + + V+P   DD  EIEI   D +ID + +SG GGQ VNTT SAVR+
Sbjct: 193 PVTESQGRIQTSAAGVIVFPEADDDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRM 252

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309
           THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++  EE     +   +++      
Sbjct: 253 THIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEEEAQEAADMRHSQVRSLDRS 310

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +IR+Y   P   + D RTN +  +   VLDGDL   + + +   
Sbjct: 311 ERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 354


>gi|195978153|ref|YP_002123397.1| peptide chain release factor 1 [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225868513|ref|YP_002744461.1| peptide chain release factor 1 [Streptococcus equi subsp.
           zooepidemicus]
 gi|238689817|sp|B4U317|RF1_STREM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|259585255|sp|C0MF07|RF1_STRS7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|195974858|gb|ACG62384.1| peptide chain release factor 1 PrfA [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225701789|emb|CAW99200.1| peptide chain release factor 1 [Streptococcus equi subsp.
           zooepidemicus]
          Length = 360

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 95/348 (27%), Positives = 159/348 (45%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP +  +      L +E       ++  ++ +  +       E+
Sbjct: 7   LQAVEDRYEELGELLSDPEVVSDTKRFMALSKEEASTRETVAAYRQYKAIIQSIDDAEEM 66

Query: 76  ALEEDDCSILQETSDNLQRIKL-----EVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E      ++E +    +          +  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKEAGGDPDIEEMAKEELKEAKAAKETYEDKLKLLLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLAMYQKFAESQGWRFEVMEASYNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E +I   D RID Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYDIDPKDLRIDIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT + V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ IG G 
Sbjct: 246 RIVHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTIGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G LD+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKLDEIVDALVLYDQ 350


>gi|294010049|ref|YP_003543509.1| peptide chain release factor RF-1 [Sphingobium japonicum UT26S]
 gi|292673379|dbj|BAI94897.1| peptide chain release factor RF-1 [Sphingobium japonicum UT26S]
          Length = 363

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 115/350 (32%), Positives = 174/350 (49%), Gaps = 17/350 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   +        L     E   L +E   ++       E++    +   L  +
Sbjct: 8   IAQIEARRDEVQASMTRADLA--PEEFVRLSKEYAEIEPVAKAAHEVRRLRQELSALEYM 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-------QFESLLSGEADSNDAYLEVHAGAGGT 128
           A  ED  S         + ++L              + L    AD+  A LE+ AG GG 
Sbjct: 66  AGGEDADSDPLMREMAQEEMQLIKSRLPDAERALALQLLPKDAADARPAMLEIRAGTGGD 125

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY R+A+ + +K E +  +  E  G K     + G   +  LK E GVH
Sbjct: 126 EAALFAGDLFRMYQRYADAQGWKMELISANASEVGGYKEVVASVTGTGVFAKLKFESGVH 185

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS +++ V P   + ++++I++SD +ID YRASGAGGQHVNTTDS
Sbjct: 186 RVQRVPVTESGGRIHTSAATVAVLP-EPEEVDVQIADSDLKIDIYRASGAGGQHVNTTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+P+G+VV  Q ERSQHKNKA+A  +LRA++YE E ++    +    + K  +G 
Sbjct: 245 AVRITHLPSGIVVTQQDERSQHKNKAKAMQVLRARIYEAERER--AQSEQAGARKAMVGS 302

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIK 354
           G    +IR+Y   P   V D R N+      ++L+G  L + + A +A  
Sbjct: 303 GDRSERIRTYNF-PQGRVTDHRINLTLHRLPEILEGPGLSEVIDALVAED 351


>gi|224417848|ref|ZP_03655854.1| peptide chain release factor 1 [Helicobacter canadensis MIT
           98-5491]
 gi|253827187|ref|ZP_04870072.1| peptide chain release factor 1 [Helicobacter canadensis MIT
           98-5491]
 gi|313141390|ref|ZP_07803583.1| peptide chain release factor 1 [Helicobacter canadensis MIT
           98-5491]
 gi|253510593|gb|EES89252.1| peptide chain release factor 1 [Helicobacter canadensis MIT
           98-5491]
 gi|313130421|gb|EFR48038.1| peptide chain release factor 1 [Helicobacter canadensis MIT
           98-5491]
          Length = 356

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 107/341 (31%), Positives = 173/341 (50%), Gaps = 9/341 (2%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           + R   ++       +  ++     L +E+  L+  +   K+    L        L  ++
Sbjct: 10  IDRYDEISNLLIQTEILSDIKRMTELSKEQSDLEKLVQKSKQYLKNLESIEENKGLLDDK 69

Query: 80  DDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +   + +E     +   +      +   L     D  + YLE+ AG GG E+  +   L 
Sbjct: 70  ELGDLAKEEIKEAELENQNLESEIKILLLPKDPNDEKNIYLELRAGTGGDEAGIFVGDLF 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           + Y R+AE + +K E +   +    G K    LIKG  AY  LK E G HR+ R+   +S
Sbjct: 130 KAYIRYAESKGWKVEIISSSENNVGGYKEVIALIKGKGAYSRLKFEGGTHRVQRVPETES 189

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS  ++ + P   D +E+ I+ +D RI+ +RA G GGQ VNTTDSAVRITHIPTG
Sbjct: 190 QGRIHTSAITVAIMP-EVDDVEVVINPNDLRIEVFRAGGHGGQCVNTTDSAVRITHIPTG 248

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315
           + V  Q E+SQHKNK +A  +L+A++YE EL+ + E     E+ K+++G G    +IR+Y
Sbjct: 249 ISVSMQDEKSQHKNKDKALKILKARIYEAELEAQME--QNAEARKSQVGSGDRSERIRTY 306

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
              P   + D R  +   S  +++ +GDLD  ++  +A  +
Sbjct: 307 NY-PQNRLSDHRIGLTLYSLEEIMLNGDLDQVIEPIIAYFQ 346


>gi|297182948|gb|ADI19096.1| protein chain release factor a [uncultured alpha proteobacterium
           HF0070_34A12]
          Length = 353

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 120/348 (34%), Positives = 181/348 (52%), Gaps = 14/348 (4%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D  + R + + ++  D        E   L RE   L      I  ++    D    + LA
Sbjct: 2   DKVLARRNEVESRLADAASMS-PDELASLSRELSELRPVCEQIDLVKRLEGDRDAAVMLA 60

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQ-----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
            E  + + + E +    +       ++        L     DS +A LEV AG GG E+ 
Sbjct: 61  EEAAEDAEMAEMAQAEIQEIEARLPEEMNSLQLLLLPRDRDDSRNAILEVRAGTGGDEAA 120

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A+ L  MY R+A K  ++ E +E+ +    G K AT  I G + +  LK E GVHR+ 
Sbjct: 121 LFASDLFGMYQRFAGKHGWRFEVMEVSETGIGGYKEATANIAGSDVFARLKFESGVHRVQ 180

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + ++I++ ESD RID +RASG GGQ VNTTDSAVR
Sbjct: 181 RVPETEAGGRIHTSAATVAVLP-EAEDVDIDVQESDLRIDVFRASGPGGQSVNTTDSAVR 239

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV  Q E+SQHKN+A+A  +LRA+LY+ E  + +       S K ++G G  
Sbjct: 240 ITHIPTGIVVSQQDEKSQHKNRAKAMKILRARLYDAERARLQAER--AASRKGQVGSGDR 297

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
             +IR+Y   P   V D R N+       V+ G+ LD+ ++A +A  +
Sbjct: 298 SERIRTYNF-PQGRVTDHRINLTLYKLDKVIAGEALDEVVEALVAEDQ 344


>gi|146300308|ref|YP_001194899.1| peptide chain release factor 2 [Flavobacterium johnsoniae UW101]
 gi|146154726|gb|ABQ05580.1| bacterial peptide chain release factor 2 (bRF-2) [Flavobacterium
           johnsoniae UW101]
          Length = 254

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 128/247 (51%), Positives = 182/247 (73%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           +LS E DS  A +++ AGAGGTES DWA ML+RMY  W E   +K + L   +G+ AGIK
Sbjct: 1   MLSDEGDSLSAVVQITAGAGGTESCDWAGMLMRMYMMWGESYGYKIKELNFQEGDVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           + TL  +G  ++G+LKGE GVHRLVRISP+DSN++RHTSF S++VYP+VDDSIEI+I+ +
Sbjct: 61  TVTLEFEGDYSFGYLKGENGVHRLVRISPFDSNAKRHTSFVSVYVYPLVDDSIEIDINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D  I T R+SGAGGQ+VN  ++ V++ H PTG+ +QC + RSQ  N+ +A  MLR++LYE
Sbjct: 121 DIEITTSRSSGAGGQNVNKVETKVQLVHKPTGIQIQCSETRSQQDNRQRAMQMLRSQLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +EL+K++      E+ K +I WG QIR+YV+QPY++VKD+RT  E +    V++G++D F
Sbjct: 181 IELKKQQAQRADIEAGKMKIEWGSQIRNYVMQPYKLVKDVRTGYETSDVDGVMNGNIDAF 240

Query: 347 MKATLAI 353
           +KA L +
Sbjct: 241 LKAYLMM 247


>gi|227487967|ref|ZP_03918283.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227542608|ref|ZP_03972657.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227092058|gb|EEI27370.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227181806|gb|EEI62778.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 358

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 114/348 (32%), Positives = 173/348 (49%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +     L  +  DP    +    +   +    L   ++   +++    D     EL
Sbjct: 8   VDDILAEYQGLEAQMADPEFANDPDNVRKAGKRYSQLQPIVNLNTQLEQARADLADAKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E+   +   E  +       E              D +D  +E+ AGAGG E+  +A 
Sbjct: 68  AYEDSAFTAEVERLEPKVVELEEKLADML--APRDPHDPDDMVMEIKAGAGGEEAALFAG 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190
            L+RMY R+AEK  F TE L+  + +  G+K  TL I+        A+   K E GVHR+
Sbjct: 126 ELVRMYQRYAEKHGFITEVLDESESDLGGVKDMTLSIRSKNPSQDGAWSVFKFEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            RI   +SN R  TS + + VYP  D+  ++EI E D R+D YR+SG GGQ VNTTDSAV
Sbjct: 186 QRIPVTESNGRIQTSAAGVLVYPEPDEVGQVEIDEKDIRVDVYRSSGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307
           R+TH+PTG++V CQ+ERSQ +NKA+A  +L+A+L ++E    +  A   E    ++    
Sbjct: 246 RLTHLPTGIIVTCQKERSQIQNKARAMQVLQARLQQIEE--EKAEAEAAEGRHAQVRTMD 303

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   + D R   +  +   VLDGD+D  + A     +
Sbjct: 304 RSERIRTYNW-PENRITDHRIGYKANNLDSVLDGDMDALLMALQDADR 350


>gi|17227769|ref|NP_484317.1| peptide chain release factor 2 [Nostoc sp. PCC 7120]
 gi|17135251|dbj|BAB77797.1| peptide chain release factor [Nostoc sp. PCC 7120]
          Length = 292

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 123/255 (48%), Positives = 179/255 (70%)

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
           +  + + LLSG  D+  A L ++AGAGGT++QDWA MLLRMYTRWAE + +K    E  +
Sbjct: 29  DQWELQQLLSGPYDAEGAVLTINAGAGGTDAQDWAFMLLRMYTRWAEDQGYKVALAEESE 88

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
           G+EAGIKSATL I G  AYG+L+ E G HRLVRISP+++N +R TSF+ + V P +D+++
Sbjct: 89  GDEAGIKSATLEITGRYAYGYLRSETGTHRLVRISPFNANGKRQTSFAGVEVMPQLDNTV 148

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           +++I + D  I T R+ G GGQ+VN  ++AVR+ H+PTG+ V+C +ERSQ +NK +A   
Sbjct: 149 QLDIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAVRCTEERSQLQNKEKALAR 208

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           L+AKL  +  +++ +          E  WG QIR+YV  PYQMVKDLRTN+E T+ +DV+
Sbjct: 209 LKAKLLVIAQEQKAQEIAQIRGDMVEASWGNQIRNYVFHPYQMVKDLRTNVETTAIADVM 268

Query: 340 DGDLDDFMKATLAIK 354
           +G+LD F+++ L  +
Sbjct: 269 NGELDMFIQSYLRQE 283


>gi|251771888|gb|EES52462.1| peptide chain release factor 2 [Leptospirillum ferrodiazotrophum]
          Length = 294

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 141/257 (54%), Positives = 189/257 (73%), Gaps = 2/257 (0%)

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
           +  + E +LS E   + A LE+H GAGGTESQDWA MLLRMY RWAE + ++T  +++  
Sbjct: 23  DQLELEEILSDEYSDSPALLEIHPGAGGTESQDWAQMLLRMYLRWAESKGYETAVIDLQP 82

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
           GEEAGIKSATL +KG +A+G+L+ E GVHRLVRISP+D+  RRHTSF+S++VYP ++  +
Sbjct: 83  GEEAGIKSATLRVKGESAFGYLQAESGVHRLVRISPFDAAKRRHTSFASVFVYPEIEGEV 142

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
            +EI + D RIDT+RAS AGGQHVN T SAVR+THIPTG+V+  Q ERSQ +N+  A+ +
Sbjct: 143 TVEIRDEDIRIDTFRASSAGGQHVNKTSSAVRLTHIPTGIVISSQNERSQIQNREMAFKV 202

Query: 280 LRAKLYELELQKREEIANIGES--SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           L+A+L+ELE QK++   +      SK E  WG QIRSYVLQPYQ+VKD RT IE +   +
Sbjct: 203 LKARLFELERQKKKAELDAISGAESKKENAWGSQIRSYVLQPYQIVKDHRTGIESSRVDE 262

Query: 338 VLDGDLDDFMKATLAIK 354
           VLDG +D +++  L  +
Sbjct: 263 VLDGKIDLYIRGYLLAR 279


>gi|116075738|ref|ZP_01472997.1| peptide chain release factor 1 [Synechococcus sp. RS9916]
 gi|116067053|gb|EAU72808.1| peptide chain release factor 1 [Synechococcus sp. RS9916]
          Length = 364

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 105/357 (29%), Positives = 172/357 (48%), Gaps = 20/357 (5%)

Query: 14  FDWDNAVQRLS-------FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
            D +  + RL         L  +  DP +  +    + + RER  L+  +   + +Q   
Sbjct: 1   MDLETLISRLDAATNSFHNLERQLADPDVASDPKRLQSIARERSRLEPLVQDYQSLQQVE 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEV 121
            +      L  E    S ++E +    +   E +    E +      S   D     LE+
Sbjct: 61  EERQQAESLLKESRGDSGMEELARLEIQDLNERQATLIERVTLALLPSDPRDERSVMLEI 120

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG E+  WA  L RMY R+  ++ +  + +  +  +  G +   L +KG   +  L
Sbjct: 121 RAGAGGDEACLWAGDLARMYERYGSRQGWNVQPVSANAADLGGYRELILSVKGDAVFSQL 180

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   +S  R HTS +++ V P   D +E++I  ++  I T R+ GAGGQ
Sbjct: 181 KFEAGVHRVQRVPATESQGRVHTSTATVAVMP-EADPVEVQIDPTELEISTARSGGAGGQ 239

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++AV + H PTG+ V C QERSQ +N+ +A  +LRAKLY  E Q  E  A    +
Sbjct: 240 NVNKVETAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAKLY--ERQLAEANAAESSA 297

Query: 302 SKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            + ++G G    +IR+Y  +    V D R     +    +L+G +DD + A +A ++
Sbjct: 298 RRAQVGTGDRSEKIRTYNAKD-NRVTDHRLGRNFS-LDPMLEGQMDDVIGACIAEEQ 352


>gi|212716435|ref|ZP_03324563.1| hypothetical protein BIFCAT_01359 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660688|gb|EEB21263.1| hypothetical protein BIFCAT_01359 [Bifidobacterium catenulatum DSM
           16992]
          Length = 383

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 106/345 (30%), Positives = 166/345 (48%), Gaps = 16/345 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +    +  +  +P +  +  + + L R    L   +S     +    D     E+A E+ 
Sbjct: 35  EEYHNIEQQMAEPEVASDPDKMRKLGRRHAELGVIVSAYTAYKQVKDDLEAAKEMASEDP 94

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D +   +  ++      E        +     D+ D  +E+ AG GG E+  +A  LLRM
Sbjct: 95  DFAEEAKRLESELPAAEEKLRTAL--IPRDPDDARDTIMEIKAGTGGEEAALFAGDLLRM 152

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193
           Y R+AEKR +       +  E  G+K   L I            +  LK E GVHR+ RI
Sbjct: 153 YMRYAEKRGWSVAVQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEGGVHRVQRI 212

Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
              +S  R  TS + + V+P   +D  EIEI + D +ID + +SG GGQ VNTT SAVR+
Sbjct: 213 PVTESQGRIQTSAAGVIVFPEADEDDDEIEIDQKDLKIDIFMSSGPGGQSVNTTYSAVRM 272

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309
           THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++  EE A   +   +++      
Sbjct: 273 THIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEEEAAQAADMRHSQVRSLDRS 330

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +IR+Y   P   + D RTN +  +   VLDGDL   + + +   
Sbjct: 331 ERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 374


>gi|332707784|ref|ZP_08427811.1| bacterial peptide chain release factor 2 [Lyngbya majuscula 3L]
 gi|332353487|gb|EGJ33000.1| bacterial peptide chain release factor 2 [Lyngbya majuscula 3L]
          Length = 294

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 146/289 (50%), Positives = 199/289 (68%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + D   +LEL   E D ++L E   NL ++  E++  + E LLSG  D+  A L ++AGA
Sbjct: 1   MEDTKAILELLELETDDALLAEAQTNLTQLNKELDRWELEQLLSGTYDAKGAVLTINAGA 60

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGT++QDWA++LLRMYTRWAE   +K    E+  G+EAGIKSATL I G  AYG+LK E+
Sbjct: 61  GGTDAQDWADLLLRMYTRWAENHGYKVHLAELSPGDEAGIKSATLEIDGLRAYGYLKAEK 120

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HRLVRISP+++N +R TSF+ + V P VD+++E+EI E D  I T RA G GGQ+VN 
Sbjct: 121 GTHRLVRISPFNANGKRQTSFAGVEVMPAVDNTVELEIPEKDLEITTSRAGGKGGQNVNK 180

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
            ++AVRI HIPTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R +          E
Sbjct: 181 VETAVRIVHIPTGLAVRCTQERSQLQNKEKALVLLKAKLLVIAEEQRAQEIAEIRGDMVE 240

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             WG QIR+YV  PYQMVKDLRT++E T+ +DVLDG+LD F++A L  +
Sbjct: 241 AAWGNQIRNYVFHPYQMVKDLRTSVETTAVNDVLDGNLDLFIEAYLRQE 289


>gi|254465069|ref|ZP_05078480.1| peptide chain release factor 1 [Rhodobacterales bacterium Y4I]
 gi|206685977|gb|EDZ46459.1| peptide chain release factor 1 [Rhodobacterales bacterium Y4I]
          Length = 351

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 170/344 (49%), Gaps = 12/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +QR  +L     D        +   L +E   L      +   +    D      +
Sbjct: 7   LEQILQRFQYLEAAMADGAG---GGDIAALAKEYSDLRPVAEQVAAYRKLQSDLREAELM 63

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   +  E    L+          Q   L    ADS  A LE+  G GG E+  +A
Sbjct: 64  LADPDMKELAAEEIPALKAAIPEAEHALQLALLPKDAADSRPAMLEIRPGTGGDEAALFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE + +K + +E    E  GIK     IKG N +  LK E GVHR+ R+ 
Sbjct: 124 GDLLRMYQRYAEGQGWKFDIIEEQMTELGGIKEVVAHIKGDNVFARLKYESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++I I  +D RIDT RASGAGGQHVNTTDSAVRITH
Sbjct: 184 ATESGGRIHTSAATVAVLP-EAEDVDIHIDANDIRIDTMRASGAGGQHVNTTDSAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG++V    E+SQH+N+  A  +L+ +LY+LE Q+ +          +++G G    +
Sbjct: 243 LPTGIIVTSS-EKSQHRNREIAMQVLKTRLYDLERQRIDSER--SADRASQVGSGDRSER 299

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       V+ GDLD+ + A  A  +
Sbjct: 300 IRTYNF-PQGRMTDHRINLTLYKLDQVMGGDLDEIIDALTADNQ 342


>gi|209527112|ref|ZP_03275626.1| peptide chain release factor 1 [Arthrospira maxima CS-328]
 gi|209492452|gb|EDZ92793.1| peptide chain release factor 1 [Arthrospira maxima CS-328]
          Length = 371

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 100/351 (28%), Positives = 174/351 (49%), Gaps = 16/351 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q    L  +  DP +  +  E + + + R  L++ ++  ++ +    +     ++
Sbjct: 10  LKSVEQTFQELTLRLADPEIATDPDEFQRVAKTRSSLEDVVNAYQDWKTTQTELAGAKQI 69

Query: 76  --------ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
                    L+E       E  +   +++      +   L     D  +  LE+ AG GG
Sbjct: 70  LRETGNDPELKEMKEMAALEVEELTTKLQELETRLKILLLPQDPNDDKNIMLEIRAGTGG 129

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  WA  L+RMY+R+AE + ++   L     +  G K A L I+G   Y  LK E GV
Sbjct: 130 DEASIWAGDLVRMYSRYAETKGWRVRLLSESLADMGGFKEAILEIQGARVYSQLKFEAGV 189

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ + P   D +E++I   D  + T R+ GAGGQ+VN  +
Sbjct: 190 HRVQRVPVTEAGGRVHTSTATVAIMP-EVDDVEVQIDPKDIEMTTARSGGAGGQNVNKVE 248

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           +AV + H PTG+ V C +ERSQ KN+ +A  +LRAKLYE +L  RE+   +    ++++G
Sbjct: 249 TAVDLFHKPTGIRVFCTEERSQLKNRERAMQILRAKLYEAKL--REQQDAVTSMRRSQVG 306

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y  +    V D R     +  + VL+G + D ++A +   +
Sbjct: 307 TGSRSEKIRTYNYKD-NRVTDHRLGHNFS-LAPVLEGGIGDLIQACIIQDQ 355


>gi|94264416|ref|ZP_01288206.1| Peptide chain release factor 1 [delta proteobacterium MLMS-1]
 gi|93455173|gb|EAT05391.1| Peptide chain release factor 1 [delta proteobacterium MLMS-1]
          Length = 354

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 178/346 (51%), Gaps = 12/346 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+   +  +R   L  +  DP +  +    + L +E  H+        + +    D   
Sbjct: 1   MFEQLADIAERKRDLEDRLADPAVSGDPGRYRSLAKEHSHVSRLEELYADYRKTSDDLEA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
             +L  EEDD  IL+      + ++  +     E           D  +  LE+ AG GG
Sbjct: 61  NGQLLQEEDDPEILELARQEGEELRQRLAQLDKELRLALVPPDPNDEKNILLEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +   L RMY+R+AE+  +K E L     E  G K    LI G + +  LK E GV
Sbjct: 121 DEASLFVANLFRMYSRYAEQLGWKVEVLSSSATEVGGYKEIIALISGDHVFSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS  ++ V P   + +E+ I+ ++ + D +R+SG GGQ VNTTD
Sbjct: 181 HRVQRVPETETQGRVHTSAVTVAVLP-EAEEVELTINPAELKYDVFRSSGPGGQSVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+VV CQ E+SQHKNKA+A  +LRA+L  L+  ++++   +    K+++G
Sbjct: 240 SAVRVTHLPTGLVVICQDEKSQHKNKAKALQVLRARL--LDQMQQQQHDQMSSDRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            G    +IR+Y   P   + D R N+      DV+ G LD+ ++  
Sbjct: 298 SGDRSERIRTYNF-PQNRLTDHRINLTSYRLEDVMLGRLDEVIEPL 342


>gi|88657945|ref|YP_507408.1| peptide chain release factor 1 [Ehrlichia chaffeensis str.
           Arkansas]
 gi|119361539|sp|Q2GGM5|RF1_EHRCR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|88599402|gb|ABD44871.1| peptide chain release factor 1 [Ehrlichia chaffeensis str.
           Arkansas]
          Length = 359

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 125/352 (35%), Positives = 186/352 (52%), Gaps = 16/352 (4%)

Query: 14  FD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           FD   +   Q+   L +  EDP     V       +E   L   IS I +      D   
Sbjct: 3   FDNSLEELSQKFYKLKSMLEDPSQLS-VDSFVAASKEYSELLPVISVIDQYNILQKDIAG 61

Query: 72  LLELALEEDDCSILQETSDNLQRIK-----LEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
           L EL    +    L+  +      +           +   L   + D+ +A LE+ AG G
Sbjct: 62  LEELINNPETDHELKSLAKEEFYERQKQLPKVKHKLKLSLLPKDKDDARNAILEIRAGTG 121

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +   L RMYT++AE++ +K E +        G K  +L I G N +  LK E G
Sbjct: 122 GEEAALFVTDLYRMYTKYAEQKNWKFEQINSSSTGIGGHKEISLCISGSNVFARLKFESG 181

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +++ R HTS +++ V P   + ++++I E D RID YR+SG GGQ VNTT
Sbjct: 182 VHRVQRVPETEASGRLHTSAATVAVLP-EIEEVDLKIDEKDLRIDVYRSSGPGGQSVNTT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIP+G+VV  Q E+SQHKNK++A  +LRA+LY LE QKR+    I +  K++I
Sbjct: 241 DSAVRITHIPSGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKRDAE--ISQMRKSQI 298

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIK 354
           G G    +IR+Y   P   + D R N+      D++ +G+LD+F++A +A  
Sbjct: 299 GSGDRSERIRTYNF-PQSRITDHRINLTLYRLDDIMKEGNLDEFIEALIAED 349


>gi|169351467|ref|ZP_02868405.1| hypothetical protein CLOSPI_02247 [Clostridium spiroforme DSM 1552]
 gi|169291689|gb|EDS73822.1| hypothetical protein CLOSPI_02247 [Clostridium spiroforme DSM 1552]
          Length = 358

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 109/352 (30%), Positives = 181/352 (51%), Gaps = 11/352 (3%)

Query: 11  GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD---NAISFIKEIQDRL 66
             + +       R   L     DP +  ++ +   + +E+  L    +     KEI++ +
Sbjct: 3   ESMLERLKTMENRYEELGHMLMDPDIGSDIKKMTDVTKEQASLQAAYDLYQEYKEIENGI 62

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            +   L +    E       E ++  +++   ++  + E +     D+ D  +E+   AG
Sbjct: 63  EEAKELAKEHDPEIKEMAKMELAELEEKLPDVIKKLEIELIPKDPNDNKDVIMEIRGAAG 122

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E   +A  L RMY ++AE + +K E +E  D E  G    + ++KG   YG LK E G
Sbjct: 123 GDEGNIFAGDLYRMYVKYAESQGWKVEVMEAIDAEAGGYSLISFMVKGEGVYGKLKFESG 182

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   ++  R HTS +++ V P   + +++EI+++D RIDTYRASGAGGQH+N T
Sbjct: 183 SHRVQRVPKTETQGRVHTSTATVLVMP-EVEEVDVEINKNDLRIDTYRASGAGGQHINKT 241

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITHIPTG+V   Q  RSQH NK +A   L A++Y+   Q++++        K+++
Sbjct: 242 DSAVRITHIPTGIVAASQDGRSQHDNKDKAMKALIARIYDYYQQQQDQQVE--SERKSKV 299

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R  +       +++G LDD + A +   +
Sbjct: 300 GTGDRAEKIRTYNY-PQNRVTDHRIGLTIQQLDRIIEGKLDDIITALINEDQ 350


>gi|88606704|ref|YP_505023.1| peptide chain release factor 1 [Anaplasma phagocytophilum HZ]
 gi|119361507|sp|Q2GKS8|RF1_ANAPZ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|88597767|gb|ABD43237.1| peptide chain release factor 1 [Anaplasma phagocytophilum HZ]
          Length = 359

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 125/349 (35%), Positives = 184/349 (52%), Gaps = 14/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           ++   ++   L  +   P          +  RE   L   +S I++ +    +   L EL
Sbjct: 7   FEGLCEKFRILKQQLSAPETLGTQA-FVVASREYSDLLPIMSLIEKYKSTQKEIAELEEL 65

Query: 76  ALEEDDCSILQETSDNLQRIK-----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
                    L+  + +   IK           Q   L     DS +A LE+ AG GG E+
Sbjct: 66  VNSASTDPELRSLAKDESHIKQKLLPKLRHELQLSLLPKDRDDSRNAILEIRAGTGGEEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +   L RMY ++AE++ +K E + I      G K A+  I G + +  LK E GVHR+
Sbjct: 126 ALFVGNLYRMYLKYAERKNWKVETINISTTGIGGYKEASFSIGGKDVFARLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S+ R HTS +++ V P   + ++++I E D RID YR+SG GGQ VNTTDSAV
Sbjct: 186 QRVPETESSGRLHTSAATVAVLP-EVEEVDLKIDEKDLRIDVYRSSGPGGQSVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG+VV  Q E+SQHKNK++A  +LRA+LY LE QKREE   I +  K++IG G 
Sbjct: 245 RITHIPTGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKREEE--ISKMRKSQIGSGD 302

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
              +IR+Y       + D R N+       V+ +GDLD+F+ A +A  +
Sbjct: 303 RSERIRTYNFL-QSRITDHRINLTSYRLDYVMKEGDLDEFIDALVADDQ 350


>gi|73667064|ref|YP_303080.1| peptide chain release factor 1 [Ehrlichia canis str. Jake]
 gi|119361538|sp|Q3YS23|RF1_EHRCJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|72394205|gb|AAZ68482.1| bacterial peptide chain release factor 1 (bRF-1) [Ehrlichia canis
           str. Jake]
          Length = 359

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 122/349 (34%), Positives = 182/349 (52%), Gaps = 14/349 (4%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           + +   Q+   L +  EDP     V       +E   L   IS I +      D   L E
Sbjct: 6   NLEELYQKFCKLKSILEDPSQLS-VDSFVAASKEYSELLPVISVIDQYNSLQKDIADLEE 64

Query: 75  LALEEDDCSILQETSDNLQRIK-----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           L    +    L+  +      +           +   +     D+ +A LE+ AG GG E
Sbjct: 65  LINNPETDHELKSLAKEEFYERQKQLPKIKNKLKLSLIPKDRDDARNAILEIRAGTGGEE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +   L RMYT++AE++ +K E +        G K  +L I G N +  LK E GVHR
Sbjct: 125 AALFVTDLYRMYTKYAEQKNWKFEQINSSSTGIGGHKEVSLCISGSNVFARLKFESGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +++ R HTS +++ V P   + ++++I E D RID YR+SG GGQ VNTTDSA
Sbjct: 185 VQRVPETEASGRLHTSAATVAVLP-EIEEVDLKIDEKDLRIDVYRSSGPGGQSVNTTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIP+G+VV  Q E+SQHKNK +A  +LRA+LY LE QKR+    I +  K++IG G
Sbjct: 244 VRITHIPSGIVVIQQDEKSQHKNKNKALKVLRARLYNLEKQKRDSE--ISQMRKSQIGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIK 354
               +IR+Y   P   + D R N+      D++ +G+LD+F+ A +A  
Sbjct: 302 DRSERIRTYNF-PQSRITDHRINLTLYRLEDIMKEGNLDEFIDALIAED 349


>gi|229496829|ref|ZP_04390538.1| peptide chain release factor 2, programmed [Porphyromonas
           endodontalis ATCC 35406]
 gi|229316240|gb|EEN82164.1| peptide chain release factor 2, programmed [Porphyromonas
           endodontalis ATCC 35406]
          Length = 318

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 128/315 (40%), Positives = 195/315 (61%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MR+ + +   I   + ++  + +    L     ++  +  +E     Q     +E  +  
Sbjct: 1   MRKVKEIRRWIEAYESVESAVEEVK--LSFDFYKEGVAEEEEVDQAYQIALSLIENVELR 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  E D   A L+V+AGAGGTESQDWA+ML+R+Y RWAE   +K       DG+EAGI
Sbjct: 59  NMLRREEDRLGAVLKVNAGAGGTESQDWASMLVRLYQRWAENHDYKVTITNWQDGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T+ I+G  AYG+LK E GVHRLVR+SPY++  +R TSF+S++V P+VDDSIEI ++ 
Sbjct: 119 KTVTMQIEGDLAYGFLKSENGVHRLVRVSPYNAQGKRMTSFASVFVVPLVDDSIEIAVNP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAW 277
           ++   DT+R+SGAGGQ+VN  ++ VR+ +            +V++  + RSQ  N+  A 
Sbjct: 179 ANLSWDTFRSSGAGGQNVNKVETGVRLHYQFKDPDTGEEREIVIENTESRSQLDNRENAL 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
            +LR++LY++EL+KR       E+ K +I WG QIRSYV    + VKD RTN + ++ + 
Sbjct: 239 RLLRSQLYDIELEKRRAAQAEVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSNVNA 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DGD+DDF+KA L 
Sbjct: 298 VMDGDIDDFIKAYLM 312


>gi|315654795|ref|ZP_07907700.1| peptide chain release factor RF1 [Mobiluncus curtisii ATCC 51333]
 gi|315490756|gb|EFU80376.1| peptide chain release factor RF1 [Mobiluncus curtisii ATCC 51333]
          Length = 367

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 107/347 (30%), Positives = 167/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++    L  +  DP L  N   A+ + R    L    + ++       D     E+
Sbjct: 11  VEALLEEYHQLEVQMSDPDLHSNQAHARKVGRRYAELSRVNTVVQGWLQARDDLEAGREM 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D     E        +                D+ D  +E+ AG GG ES  +A 
Sbjct: 71  --AGEDPDFAAEIPGLEAAFEQANADLIEALTPRDPDDARDVIMEIKAGEGGEESALFAG 128

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVH 188
            L+RMY  +AEK  +  + L + + +  G+K A++              +  LK E GVH
Sbjct: 129 DLMRMYQHYAEKMGWTVQVLGLTESDLGGVKDASIAFKAKGNPSPEEGVWAHLKYEGGVH 188

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V P  +++ +IEI  +D RID YR+SG GGQ VNTTDS
Sbjct: 189 RVQRVPVTESQGRIHTSAAGVLVMPEAEETGDIEIDPNDLRIDVYRSSGPGGQSVNTTDS 248

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307
           AVRITH+PTG+VV  Q E+SQ +NK     +LR++L +LE +KRE  A    +S+   + 
Sbjct: 249 AVRITHLPTGIVVSMQNEKSQLQNKEAGMRVLRSRLMQLEAEKREAEAAEARASQVRTVD 308

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +IR+Y   P   + D RT  +  +   VL+GDL   +++ +   
Sbjct: 309 RSERIRTYNF-PENRIADHRTGYKAYNLDQVLNGDLAPVIQSAIDAD 354


>gi|296282001|ref|ZP_06859999.1| peptide chain release factor 1 [Citromicrobium bathyomarinum JL354]
          Length = 355

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 113/345 (32%), Positives = 169/345 (48%), Gaps = 13/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R + +  +     L     E     R+   L+       E++    +   L E+
Sbjct: 8   LDQIANRFAEIEARMASGQL--EGEEFVQASRDYAELEPVAKLALELKAAREEVAGLDEM 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFE--SLLSGEADSNDAYLEVHAGAGGTESQDW 133
             + +    + E        ++    +Q     L    AD+  A LE+ AG GG E+  +
Sbjct: 66  LADPE-MRDMAEEELEALNQRIPELEQQLAVAMLPRDSADAKPAMLEIRAGTGGDEAALF 124

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMY R+A ++ +K E + +   E  G K     + G   +  LK E GVHR+ R+
Sbjct: 125 AGDLYRMYERFAGEQGWKVEPVSMSASEVGGFKEIVAHVTGTGVFAKLKFESGVHRVQRV 184

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS +++ V P   D +++++   D +IDTYRASGAGGQHVNTTDSA+RIT
Sbjct: 185 PETESGGRIHTSAATVAVLP-EPDEVDVQVDPGDLKIDTYRASGAGGQHVNTTDSAIRIT 243

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG+VV CQ  RSQHKN+ QA  +LRA+LY  E Q+        E+ K  +G G    
Sbjct: 244 HLPTGLVVTCQDGRSQHKNREQAMQVLRARLY--EQQRDAAQGAEAEARKAMVGSGDRSE 301

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIK 354
           +IR+Y   P   V D R  +       ++ G  L + + A +A  
Sbjct: 302 RIRTYNF-PQGRVTDHRIGLTLQKLPQIIAGPGLGELVDALIAED 345


>gi|71894205|ref|YP_278313.1| peptide chain release factor 1 [Mycoplasma synoviae 53]
 gi|119361563|sp|Q4A6L9|RF1_MYCS5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71850993|gb|AAZ43602.1| peptide chain release factor 1 [Mycoplasma synoviae 53]
          Length = 359

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 109/334 (32%), Positives = 167/334 (50%), Gaps = 6/334 (1%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN----LILL 73
           N  ++   L ++   P +  ++ +   L +E   +   +    E  +   +      +L 
Sbjct: 11  NIKEKYQDLKSQLNLPEIIADIKKYTKLSKEINSISEIVETFDEFLNLEENIKSSKELLD 70

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
                E      +E S    +     E  +   L   + D+ D  +E+   AGG E+  +
Sbjct: 71  IETDAEVIMLAKEEISQAQSKQLELEEKLKVLLLPKDKNDNKDVIVEIRGAAGGDEANIF 130

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  L RMYT+W ++   K   L++      G    T  I+G  AY  LK E GVHR+ RI
Sbjct: 131 AGDLYRMYTKWCQQNNMKLSTLDLSPAVSGGFTLVTFSIQGEKAYSKLKFESGVHRVQRI 190

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ V P +DD IEIEI + D RID +R+SG GGQ VNTTDSAVRIT
Sbjct: 191 PVTETKGRVHTSTATVTVMPEIDDDIEIEIKKEDLRIDVFRSSGNGGQSVNTTDSAVRIT 250

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H PTG+VV CQ+ +SQ +NK  A  +L++KLY+LELQK++   +             +IR
Sbjct: 251 HFPTGIVVSCQEGKSQIQNKDIAMRILKSKLYDLELQKKQSEESGYRKLAGSGARSEKIR 310

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +Y   P   V D R     +  + V++G L+  +
Sbjct: 311 TYNY-PQDRVTDHRIGYSTS-LNYVMEGRLNPII 342


>gi|58579040|ref|YP_197252.1| peptide chain release factor 2 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58617098|ref|YP_196297.1| peptide chain release factor 2 [Ehrlichia ruminantium str. Gardel]
 gi|58416710|emb|CAI27823.1| Peptide chain release factor 2 (RF-2) [Ehrlichia ruminantium str.
           Gardel]
 gi|58417666|emb|CAI26870.1| Peptide chain release factor 2 (RF-2) [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 251

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 148/249 (59%), Positives = 194/249 (77%), Gaps = 1/249 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALEIHDGEEAGI 165
           + S EAD ND ++E+ +GAGGTES DW+NMLLRMY RWAE    FKT+ +   DGEE G+
Sbjct: 1   MFSDEADQNDCFIEIQSGAGGTESNDWSNMLLRMYIRWAEIYHNFKTQVVYKLDGEETGV 60

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSA + + G NAYGW K E G+HRLVRISP++SN++RHT+F+S+ V PV +++ +I+I +
Sbjct: 61  KSAIIKVIGYNAYGWSKTESGIHRLVRISPFNSNAKRHTTFASVLVSPVTNENFDIQIHD 120

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D RIDTYRASGAGGQHVN T+SAVRITHIP+G+VVQCQ  RSQH+N  +A+N+LR++LY
Sbjct: 121 KDLRIDTYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNNRSQHQNLGEAYNLLRSRLY 180

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           +L+LQ++E+      S + +IGWG QIRSYV+ PYQMVKD+RT  E  + + VLDGDLD 
Sbjct: 181 QLKLQEKEKKMAQEHSQRCDIGWGNQIRSYVMHPYQMVKDIRTGYETGNVNSVLDGDLDA 240

Query: 346 FMKATLAIK 354
           F+ ATL  K
Sbjct: 241 FIIATLTKK 249


>gi|27904663|ref|NP_777789.1| peptide chain release factor 1 [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
 gi|29427417|sp|P59456|RF1_BUCBP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|27904060|gb|AAO26894.1| peptide chain release factor 1 [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
          Length = 362

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 106/343 (30%), Positives = 177/343 (51%), Gaps = 7/343 (2%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +   ++  +R   + +   D  +  N  + + L +E   L +      + ++   D +  
Sbjct: 6   MKKLESLHRRYEEIESMLSDRTVISNQEKFRELSQEYLKLSDINYCFVQWKNCNHDVIET 65

Query: 73  LELALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             L L+ +   + ++      +++K      Q   L     D  + +LE+ + +GG E+ 
Sbjct: 66  KLLLLDSELHDVAEQELQMLSKKMKKIETEIQVLLLPCDPNDQQNCFLEIRSASGGDEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            ++  L RMY +++E + +KT  + +    + G K   + I G  +YG LK E G HR+ 
Sbjct: 126 IFSGDLFRMYIKYSEFQNWKTNIIHMTHSLKGGYKDIIVKITGKGSYGKLKFESGGHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS   + V PVV      +++ +D +IDT+R+SGAGGQHVNTTDSAVR
Sbjct: 186 RVPKTESQGRVHTSTCIVAVIPVVPKKEIEKVNINDLKIDTFRSSGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIP+G VV+CQ ERSQHKNKA+A ++L +++   EL  + +   I    +  +G G  
Sbjct: 246 ITHIPSGQVVECQDERSQHKNKAKALSVLVSRIKAAELYNQRKKNAI--QRRDLLGTGMR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             + R+Y       V D R N+      +VLDG LD  ++  +
Sbjct: 304 SDRNRTYNFA-QNRVTDHRINLVVYCLDEVLDGKLDVLIEPII 345


>gi|84494539|ref|ZP_00993658.1| peptide chain release factor 1 [Janibacter sp. HTCC2649]
 gi|84384032|gb|EAP99912.1| peptide chain release factor 1 [Janibacter sp. HTCC2649]
          Length = 360

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 103/351 (29%), Positives = 170/351 (48%), Gaps = 13/351 (3%)

Query: 13  LFDW-DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +   Q  + L  +  DP +  +  + + + +    L   ++     Q    D   
Sbjct: 1   MFESAEVLAQEHATLEREMGDPAIASDPDKLREINKRYAALGPTVAAYAAWQLATDDLEA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             ELA E+   +      +       +   +        +        EV AG GG ES 
Sbjct: 61  ARELATEDAGFAAEVPALETSANDAADRLRRLLIPRDPDDDRDVIV--EVKAGEGGEESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGE 184
            +A  LLRMY R+AE+R ++TE L   + +  G K   + +        G   +  LK E
Sbjct: 119 LFAGDLLRMYLRYAERRGWRTEVLGSTETDLGGFKDVQVSVKSKKAPLPGEGPWARLKYE 178

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   ++  R HTS + +WV P   + +E+EI  +D RID +R+SG GGQ VN
Sbjct: 179 GGVHRVQRVPITETQGRIHTSAAGVWVMP-EAEEVEVEIHANDLRIDVFRSSGPGGQSVN 237

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVR+TH+PTG VV CQ E+SQ +N+  A  +LRA+L+++ + +    +    +S+ 
Sbjct: 238 TTDSAVRLTHLPTGTVVICQNEKSQLQNREAAMRVLRARLHQMAMDEANAASADIRASQV 297

Query: 305 E-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +    +IR+Y       + D RT  +  +   VL G+LD  +++ +   
Sbjct: 298 RTVDRSERIRTYNFA-ENRISDHRTGFKAYNLDTVLGGELDAVVESAMTAD 347


>gi|261338133|ref|ZP_05966017.1| peptide chain release factor 1 [Bifidobacterium gallicum DSM 20093]
 gi|270276761|gb|EFA22615.1| peptide chain release factor 1 [Bifidobacterium gallicum DSM 20093]
          Length = 362

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 106/344 (30%), Positives = 165/344 (47%), Gaps = 16/344 (4%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
             A++    +  +   P +  +    + L R    L   +   +  +  + D     E+A
Sbjct: 10  QTALEEYRNIEQRMAQPDVASDPNAMRKLGRRHAELAGIVGPYQRYRSMIDDLEAAREMA 69

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
            E+ D +   +  +       E        +     D+ D  +E+ AG GG E+  +A  
Sbjct: 70  AEDPDFAEEAKRLETQLDDAAEALRTAL--IPRDPDDARDMIMEIKAGTGGEEAALFAGD 127

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHR 189
           LLRMYTR+AEKR +       +  E  G+K   L I            +  LK E GVHR
Sbjct: 128 LLRMYTRYAEKRGWSVTIQSENSTELGGVKDVQLAIRAKGTVAPEDGVWASLKYEGGVHR 187

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           + RI   +S  R  TS + + V+P   +D  EIEI   D +ID + +SG GGQ VNTT S
Sbjct: 188 VQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYS 247

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI-- 306
           AVR+THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++  +E A   +   +++  
Sbjct: 248 AVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRS 305

Query: 307 -GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
                +IR+Y   P   + D RTN +  +   VLDGDL   + +
Sbjct: 306 LDRSERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDS 348


>gi|19552424|ref|NP_600426.1| peptide chain release factor 1 [Corynebacterium glutamicum ATCC
           13032]
 gi|62390088|ref|YP_225490.1| peptide chain release factor 1 [Corynebacterium glutamicum ATCC
           13032]
 gi|145295339|ref|YP_001138160.1| peptide chain release factor 1 [Corynebacterium glutamicum R]
 gi|24418635|sp|Q8NR57|RF1_CORGL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223553|sp|A4QDG1|RF1_CORGB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|21323967|dbj|BAB98593.1| Protein chain release factor A [Corynebacterium glutamicum ATCC
           13032]
 gi|41325424|emb|CAF19904.1| PEPTIDE CHAIN RELEASE FACTOR 1 (RF-1) [Corynebacterium glutamicum
           ATCC 13032]
 gi|140845259|dbj|BAF54258.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 358

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 112/346 (32%), Positives = 172/346 (49%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +     L  +  DP L  +   A+ + +    L   I+  +++     D     E+
Sbjct: 8   VDDILSEYHGLEQQMADPELHNDAAAARRVGKRYSELQPIINVHRDLVSAQEDLEAAREM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D     E       +    E            D  D  +E+ AGAGG E+  +A 
Sbjct: 68  --AHEDHEFQAEAERLEVEVVELEEKLADLLAPRDPHDGEDIVMEIKAGAGGEEAALFAG 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-----YGWLKGEQGVHRL 190
            LLRMY ++A+K  F  E L+  + +  G+K  TL I+         +   K E GVHR+
Sbjct: 126 DLLRMYQKFADKHGFVVEVLDSAESDLGGVKDITLSIRSRQPSRDGAWSQFKFEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R  TS + + VYP  D+   +EI E D R+D YR+SG GGQ VNTTDSAV
Sbjct: 186 QRVPVTESQGRIQTSAAGVLVYPEPDEVENVEIDEKDIRVDVYRSSGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG+VV CQ+ERSQ +N+A+A  +L A+L  ++ ++    A  G +++   +   
Sbjct: 246 RITHLPTGLVVTCQKERSQIQNRARAMQVLAARLQAMKEEEAAAEAATGRAAQIRTMDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R   +  +   VLDG+LDD   A  A ++
Sbjct: 306 ERIRTYNW-PENRISDHRIGFKANNLDSVLDGELDDLFTALQAAER 350


>gi|190570518|ref|YP_001974876.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213019274|ref|ZP_03335081.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|238054477|sp|B3CL87|RF1_WOLPP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|190356790|emb|CAQ54152.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995383|gb|EEB56024.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 363

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 124/348 (35%), Positives = 188/348 (54%), Gaps = 15/348 (4%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           +  +  ++ S +    E+P       E     +E   L   I  I E      +   L E
Sbjct: 6   NLQDLKKKFSDVERNLENPTNLS-QKEFVSFSKEYSELRPIIEIIDEYNILKEEISDLEE 64

Query: 75  LALEEDDCSILQETSDNLQRIK------LEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           +  +E+    ++E +      K            +   L   E DS +A LE+ AG GG 
Sbjct: 65  IMKDENSDGDIKELAKEELLEKQKIVLPKVKAKLKLALLPKDEDDSRNAILEIRAGTGGE 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A ML RMY ++AE+R +K E + I +    G K A+ LI G   +  LK E GVH
Sbjct: 125 EAALFAAMLFRMYQKYAERRNWKFEPISISNTGIGGYKEASALINGTEVFARLKFESGVH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S+ R HTS +++ + P   + ++ EI E D RID YR+SG GGQ VNTTDS
Sbjct: 185 RVQRVPETESSGRLHTSAATVAILP-EVEEVDFEIEEKDLRIDVYRSSGPGGQSVNTTDS 243

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+TH+PTG+VV  Q E+SQHKNKA+A  +LRA+LYE+E QK+E   +     K++IG 
Sbjct: 244 AVRVTHLPTGIVVIQQDEKSQHKNKAKALKVLRARLYEIERQKKEMERSTM--RKSQIGS 301

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           G    +IR+Y   P   + D R N+       ++ +G+LD+F++A ++
Sbjct: 302 GDRSERIRTYNF-PQSRITDHRINLTSHRLEQIIKEGELDEFIEALIS 348


>gi|57234023|ref|YP_181923.1| peptide chain release factor 1 [Dehalococcoides ethenogenes 195]
 gi|119361531|sp|Q3Z776|RF1_DEHE1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|57224471|gb|AAW39528.1| peptide chain release factor 1 [Dehalococcoides ethenogenes 195]
          Length = 355

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 99/345 (28%), Positives = 169/345 (48%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N  +R   +  +   P +  +    + L +ER  L   +   +  +    +      L
Sbjct: 5   LENCEKRFREIEEEISKPEVINDARLVRTLAQERADLQTKVEMYRRYKAISKELEDTKNL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY----KQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +       +  ++  +         E L     D     +E+ AG GG E+ 
Sbjct: 65  LEIEKDEDMKDMVRGEIASLEKSMADLYTQMTLELLPKDPNDDKSIIMEIRAGTGGDEAG 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MYTR+A  + +KTE ++I+      IK     + G  A+  LK E+GVHR+ 
Sbjct: 125 LFAADLYKMYTRYALLKNWKTEVIDINGNVAGIIKEVVFEVNGKGAFSRLKYERGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS +++ V P   + ++I+I+  D R+D + +SGAGGQ+V    +A+R
Sbjct: 185 RVPQTEASGRIHTSTATVAVLP-QVEEVDIDINMDDVRVDIFHSSGAGGQNVQKVATAIR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA-NIGESSKTEIGWGR 310
           +THIPTG+VV CQ ERSQ KNK +A+ +LRA+L ELE  K +E       +   +     
Sbjct: 244 LTHIPTGLVVCCQDERSQLKNKNKAFAVLRARLMELEQSKVDEERTESRRAQVGQADRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   + D R  +   +   +L+G LD+ +      ++
Sbjct: 304 KIRTYNF-PQDRLTDHRIGLTAHNLPHILEGYLDEIIDTLATHEQ 347


>gi|157363244|ref|YP_001470011.1| peptide chain release factor 1 [Thermotoga lettingae TMO]
 gi|157313848|gb|ABV32947.1| peptide chain release factor 1 [Thermotoga lettingae TMO]
          Length = 347

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 114/335 (34%), Positives = 174/335 (51%), Gaps = 13/335 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  ++   L  K    +L  ++ + +    E   L  A+   ++++    +       
Sbjct: 9   IKDVNKKTIELEQKLSSSNL--DIEQLREFSVEYSRLKEALEIYQQLKQVEEEM----NF 62

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
             E        E      R + E    Q  S L    + N+   E+ AG GG E+  +A 
Sbjct: 63  WQEAMKEDPSLEEDFLKARKQYEDIISQLISHLLPFEEHNNVIFEIRAGTGGEEAALFAA 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY R+AE++ ++ E  + HD    G K     +KG +AY +LK E GVHR+ R+  
Sbjct: 123 DLYRMYIRYAERKGWQVELSDFHDTGLGGFKEIVFFVKGKSAYKYLKYESGVHRVQRVPV 182

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S+ R HTS +++ V P     +EI I   D +IDT++ASG GGQ+VN T+SAVRITH+
Sbjct: 183 TESSGRIHTSTATVAVLP-EVSDVEIHIDPKDLKIDTFKASGHGGQYVNKTESAVRITHL 241

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WGRQI 312
           PTG++V CQ ERSQH+N+ +A  +LRAKLYE+E +K    + +    K +IG      +I
Sbjct: 242 PTGIIVSCQSERSQHQNRERALVILRAKLYEIEQEKIN--SQLSNQRKNQIGSAERSEKI 299

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           R+Y   P   V D R N       ++LDGDLD+ +
Sbjct: 300 RTYNF-PQNRVTDHRINYTTYRLQEILDGDLDELI 333


>gi|114569197|ref|YP_755877.1| peptide chain release factor 1 [Maricaulis maris MCS10]
 gi|119361557|sp|Q0ARZ8|RF1_MARMM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|114339659|gb|ABI64939.1| bacterial peptide chain release factor 1 (bRF-1) [Maricaulis maris
           MCS10]
          Length = 357

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 170/347 (48%), Gaps = 15/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               + R   +  +        +  E   L +E   L         ++    +   L E+
Sbjct: 8   LAQVIDRFDQVEARLGAAG---DADEIVKLSKEHAELKPVAEKANALKSARAELAELAEM 64

Query: 76  ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
              +D         +     +             L   + DS +A +E+ AG GG E+  
Sbjct: 65  MEGDDAEMAEMAREEFYALKERLPELEHAMSLMLLPKDKDDSANAMIEIRAGTGGDEAAI 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L  MY R+A+ + +  E +   +GE  G K     I G   +G LK E GVHR+ R
Sbjct: 125 FAGNLYGMYQRYAQLQGWSWELVSASEGEHGGYKEVVAAISGNGVFGRLKFESGVHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ + P   + I+IE+   D R+DT RASGAGGQHVN TDSAVR+
Sbjct: 185 VPATESQGRIHTSAATVAIMP-QPEDIDIELDMGDVRVDTMRASGAGGQHVNKTDSAVRM 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIPTG+VV CQ E+SQH+N+A+A  +L+AKLY+  +Q+    A      K +IG G   
Sbjct: 244 THIPTGLVVVCQ-EKSQHQNRARAQEILKAKLYD--MQREAANAERAAERKGQIGSGDRS 300

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
            +IR+Y   P   V D R N+      D++ GD LD+ + A +A  +
Sbjct: 301 ERIRTYNY-PQGRVSDHRINLTLYKLDDIVAGDGLDEVVAALIAEDQ 346


>gi|115522190|ref|YP_779101.1| peptide chain release factor 1 [Rhodopseudomonas palustris BisA53]
 gi|122298096|sp|Q07VB3|RF1_RHOP5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|115516137|gb|ABJ04121.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodopseudomonas
           palustris BisA53]
          Length = 359

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 168/344 (48%), Gaps = 16/344 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R + L  +   P    N      + RE   L+  +  +K  +    +   +  L
Sbjct: 9   LDILLARHAALEAQLLGP---VNSEHYVKITRELAELNPLVDAVKAYRQVRDEIGDIDSL 65

Query: 76  ALEEDDCSILQETSDNLQ-----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             + D    L+  +               +  +   L     D  +  LEV AG GG E+
Sbjct: 66  IADPDSDPELRAMAQAEHAALEEHEAELAQQIRIALLPKDAMDDRNVMLEVRAGTGGDEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY ++A  + +  E +   +G   G K     +KG  A+  LK E GVHR+
Sbjct: 126 SLFAGDLFRMYEKFAALQGWSVEVISASEGAAGGFKEIIAEVKGRGAFAKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + +++EI + D +IDT RA GAGGQHVN T+SA+
Sbjct: 186 QRVPDTETQGRIHTSAATVAVMP-EVEEVDVEIKQDDLKIDTMRAQGAGGQHVNKTESAI 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VV  Q  RSQHKN+A A N+LR+++Y+ E Q+ +  A      K ++G G 
Sbjct: 245 RITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAEQQRLD--AARSAERKEKVGSGD 302

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
              +IR+Y   P   V D R N+       V+ G+ L + + A 
Sbjct: 303 RSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGEALGELVDAL 345


>gi|220920161|ref|YP_002495462.1| peptide chain release factor 1 [Methylobacterium nodulans ORS 2060]
 gi|254790889|sp|B8IUB4|RF1_METNO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219944767|gb|ACL55159.1| peptide chain release factor 1 [Methylobacterium nodulans ORS 2060]
          Length = 359

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 108/347 (31%), Positives = 171/347 (49%), Gaps = 13/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   +           +      L RE   LD+ ++ I+  +    +   +  +
Sbjct: 9   LDAILARHDIVTATLSAGE--ADSESFVQLSRELSDLDDVVAAIRAYRAADAELRGVEAM 66

Query: 76  ALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E D         +            +  Q   L    AD   A LE+ AG GG E+  
Sbjct: 67  LEEGDPEMRALAAEEKPEVEAARDAAAKALQILLLPKDSADEKSAILEIRAGTGGDEAAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY R+A+ + +K E +    G   G +     +KG   +  LK E G HR+ R
Sbjct: 127 FAGDLFRMYARYADLKGWKVEVVSESPGTMGGYREVVAEVKGRGVFARLKFESGAHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P   + ++I ++E+D +IDT RA GAGGQHVN T+SA+RI
Sbjct: 187 VPETETQGRIHTSAATVAVLP-EAEEVDIHVNEADLKIDTMRAQGAGGQHVNKTESAIRI 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+P+G+VV  Q+ERSQHKN+A+A  +LRA+LY  E ++ ++ A      + ++G G   
Sbjct: 246 THMPSGIVVFVQEERSQHKNRARAMAVLRARLY--EQERSQKDAARAADRRAQVGSGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+      +VL G  LD+ + A +   +
Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTLYKLEEVLAGTALDELVDALVTEHQ 349


>gi|170077656|ref|YP_001734294.1| peptide chain release factor 1 [Synechococcus sp. PCC 7002]
 gi|238689045|sp|B1XJH8|RF1_SYNP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169885325|gb|ACA99038.1| peptide chain release factor 1 [Synechococcus sp. PCC 7002]
          Length = 363

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 105/348 (30%), Positives = 177/348 (50%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q    +  +  DP +  N  E + + + R  L+  ++   + ++   +     E+
Sbjct: 10  LKSVEQTFQEMTRRLADPDIATNPDELQRVAKIRSSLEETVNTFNQWKEAQEELRGAKEI 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130
             E      ++E +                  +   L     D  +  LE+ AG GG E+
Sbjct: 70  LKESAGDPEMKEMAALEVEELENTIDTLENRLKILLLPKDPNDEKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  LLRMY+R+AE + ++ + L     +  G K+  L I+G   Y  LK E GVHR+
Sbjct: 130 SIWAGDLLRMYSRYAEGQNWRVKLLSESAADMGGFKAVILEIQGEQVYSKLKYEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS ++I V P   D +E+EI   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPVTEAGGRVHTSTATIAVMP-EVDDVEVEIDPKDIEMTTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C +ERSQ +N+ +A  +LRAKLYE+ELQ+++E   +    K+++G G 
Sbjct: 249 DLFHKPTGIRVFCTEERSQLQNRERAMQILRAKLYEMELQRQQEE--VSSMRKSQVGTGA 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R   +  S +  L+GD++D ++A ++  +
Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLG-QNFSLAPALEGDIEDMLQACISQDQ 352


>gi|289675203|ref|ZP_06496093.1| peptide chain release factor 2 [Pseudomonas syringae pv. syringae
           FF5]
 gi|302185552|ref|ZP_07262225.1| peptide chain release factor 2 [Pseudomonas syringae pv. syringae
           642]
 gi|330896019|gb|EGH28242.1| peptide chain release factor 2 [Pseudomonas syringae pv. japonica
           str. M301072PT]
 gi|330936871|gb|EGH41012.1| peptide chain release factor 2 [Pseudomonas syringae pv. pisi str.
           1704B]
 gi|330968992|gb|EGH69058.1| peptide chain release factor 2 [Pseudomonas syringae pv. aceris
           str. M302273PT]
 gi|330975436|gb|EGH75502.1| peptide chain release factor 2 [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 248

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 152/247 (61%), Positives = 192/247 (77%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SG+ D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK
Sbjct: 1   MFSGDMDPNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            AT+ IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ +
Sbjct: 61  GATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPA 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRA+LYE
Sbjct: 121 DLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E+QKR   +   E +K++IGWG QIRSYVL     +KDLRTNIE++    VLDGD+D++
Sbjct: 181 QEVQKRNAASQALEDTKSDIGWGHQIRSYVLD-ASRIKDLRTNIERSDCDKVLDGDIDEY 239

Query: 347 MKATLAI 353
           + A+L  
Sbjct: 240 LIASLKQ 246


>gi|148377997|ref|YP_001256873.1| peptide chain release factor 1 [Mycoplasma agalactiae PG2]
 gi|238686692|sp|A5IZH6|RF1_MYCAP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|148292043|emb|CAL59435.1| Peptide chain release factor 1 [Mycoplasma agalactiae PG2]
          Length = 358

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 110/349 (31%), Positives = 171/349 (48%), Gaps = 6/349 (1%)

Query: 11  GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
             +F       Q    L  K +DP +  N+ E   + +E   +          ++ L D 
Sbjct: 3   KTMFKSLSEIKQSYLELLKKIDDPEVISNIKEYSAINKEIAKIREISEKFITYENILKDV 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYLEVHAGAG 126
                +   +++  +        +      E ++      L   E D  +  +E+   AG
Sbjct: 63  EQAKIMLESKNEEEVEFAKMIIDENSLKLDELEEKLKILILPQDENDDKNIIVEIRGAAG 122

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMY+++A++  F+ + L  +     G       IKG  AY   K E G
Sbjct: 123 GDEANIFAGDLFRMYSKFADELGFRLKILSTNSASAGGFSQIVFSIKGEKAYSKFKFESG 182

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS +++ V P +DDS+EIEI  SD +ID +R+SGAGGQ VNTT
Sbjct: 183 VHRVQRVPVTESQGRIHTSTTTVTVMPEIDDSVEIEIKPSDLKIDVFRSSGAGGQSVNTT 242

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PT +VV  Q ERSQ  N+  A  +L++KLY+LE+QK+ E  +         
Sbjct: 243 DSAVRITHLPTNIVVTSQDERSQIANRETALTILKSKLYDLEMQKKAEEESGYRKLAGHG 302

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R +   +    +++G L   + A LA ++
Sbjct: 303 DRSEKIRTYNY-PQDRVTDHRISFSTS-LKPIMEGKLTPIIDALLAEEQ 349


>gi|94271210|ref|ZP_01291905.1| Peptide chain release factor 1 [delta proteobacterium MLMS-1]
 gi|93450530|gb|EAT01680.1| Peptide chain release factor 1 [delta proteobacterium MLMS-1]
          Length = 354

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 178/346 (51%), Gaps = 12/346 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+   +  +R   L  +  DP +  +    + L +E  H+        + +    D   
Sbjct: 1   MFEQLADIAERKRDLEDRLADPAVSGDPGRYRSLAKEHSHVSRLEELYADYRKTSDDLEA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGG 127
             +L  EEDD  IL+      + ++  +     E           D  +  LE+ AG GG
Sbjct: 61  NGQLLQEEDDPEILELARQEGEELRQRLAQLDKELRLALVPPDPNDEKNILLEIRAGTGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +   L RMY+R+AE+  +K E L     E  G K    LI G + +  LK E GV
Sbjct: 121 DEASLFVANLFRMYSRYAEQLGWKVEVLSSSTTEVGGYKEIIALISGDHVFSRLKYESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS  ++ V P   + +E+ I+ ++ + D +R+SG GGQ VNTTD
Sbjct: 181 HRVQRVPETETQGRVHTSAVTVAVLP-EAEEVELSINPAELKYDVFRSSGPGGQSVNTTD 239

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+PTG+VV CQ E+SQHKNKA+A  +LRA+L  L+  ++++   +    K+++G
Sbjct: 240 SAVRVTHLPTGLVVICQDEKSQHKNKAKALQVLRARL--LDQMQQQQHDQMSSDRKSQVG 297

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            G    +IR+Y   P   + D R N+      DV+ G LD+ ++  
Sbjct: 298 SGDRSERIRTYNF-PQNRLTDHRINLTSYRLEDVMLGRLDEVIEPL 342


>gi|328773067|gb|EGF83104.1| hypothetical protein BATDEDRAFT_85755 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 367

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 145/354 (40%), Positives = 219/354 (61%), Gaps = 5/354 (1%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQHLDNAISFIKE 61
           +S+    +    +W+    + S L  + +D +LW  +  EA  + ++   L++ I+   +
Sbjct: 8   ISKLFKTIDEKKNWEVVESKASDLRDRLKDDNLWTTDTKEAIEIQKDISRLESEIAEHSK 67

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              +  +   ++ELA EE D ++L+E   +++ ++ ++     +SL++ E D +  Y+E+
Sbjct: 68  FTVKWNETQSMIELAKEEGDDTLLKEVVADMEDLEAQLRQYFIKSLMTDEVDQSGCYIEI 127

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG ES DW +ML RMY RW   +     ++    G+ AG+KS+T  I+G  AYGW 
Sbjct: 128 RAGAGGAESCDWVSMLTRMYERWGADQGHTVTSIAQVKGDVAGLKSSTTQIQGDYAYGWS 187

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV----VDDSIEIEISESDCRIDTYRASG 237
           K E GVHR VR+SP+DSN++RHTSF S+ V P+       +  IEIS ++ +++  RA G
Sbjct: 188 KNESGVHRFVRVSPFDSNAKRHTSFVSVQVLPILSTSRLSTKTIEISTNELKLEFMRAQG 247

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           AGGQHVN T+SAVR+THIPTG+ V CQ ERSQ +NKA A  ML++KLY++EL K      
Sbjct: 248 AGGQHVNKTESAVRMTHIPTGITVFCQSERSQVQNKATALEMLKSKLYQVELDKLSRQKQ 307

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              ++  E  WG  IRSYVLQPYQ+VKD RT  + T+  DVL+G L +FM++ L
Sbjct: 308 EHHANLGENAWGNHIRSYVLQPYQLVKDTRTGTQTTNVQDVLNGGLQEFMESAL 361


>gi|307296979|ref|ZP_07576795.1| peptide chain release factor 1 [Sphingobium chlorophenolicum L-1]
 gi|306877505|gb|EFN08733.1| peptide chain release factor 1 [Sphingobium chlorophenolicum L-1]
          Length = 363

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 114/350 (32%), Positives = 175/350 (50%), Gaps = 17/350 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   +        L     E   L +E   ++       E++    +   L  +
Sbjct: 8   IAQIEARRDEVQASMTRADLA--PEEFVRLSKEYAEIEPVARAAHEVRRLRQELSALEYM 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-------QFESLLSGEADSNDAYLEVHAGAGGT 128
           A  ED  +         + ++L              + L    AD+  A LE+ AG GG 
Sbjct: 66  AGGEDADADPLMREMAQEEMQLIKSRLPDAERALALQLLPKDAADARPAMLEIRAGTGGD 125

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY R+A+ + +K E +  +  E  G K     + G   +  LK E GVH
Sbjct: 126 EAALFAGDLFRMYQRYADAQGWKMELISANASEVGGYKEVVASVTGVGVFAKLKFESGVH 185

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS +++ V P   + ++++I++SD +ID YRASGAGGQHVNTTDS
Sbjct: 186 RVQRVPVTESGGRIHTSAATVAVLP-EPEEVDVQIADSDLKIDIYRASGAGGQHVNTTDS 244

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+P+G+VV  Q ERSQHKNKA+A  +LRA++YE+E ++    +    + K  +G 
Sbjct: 245 AVRITHLPSGIVVTQQDERSQHKNKAKAMQVLRARIYEVERER--AQSEQAGARKAMVGS 302

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIK 354
           G    +IR+Y   P   V D R N+      ++L+G  L + + A +A  
Sbjct: 303 GDRSERIRTYNF-PQGRVTDHRINLTLHRLPEILEGPGLSEVIDALVAED 351


>gi|291320737|ref|YP_003516002.1| peptide chain release factor 1 [Mycoplasma agalactiae]
 gi|290753073|emb|CBH41049.1| Peptide chain release factor 1 [Mycoplasma agalactiae]
          Length = 358

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 113/349 (32%), Positives = 173/349 (49%), Gaps = 6/349 (1%)

Query: 11  GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
             +F       Q    L  K +DP +  N+ E   + +E   +          ++ L D 
Sbjct: 3   KTMFKSLSEIKQSYLELLKKIDDPEVISNIKEYSAINKEIAKIREISEKFITYENILKDV 62

Query: 70  LILLEL---ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
                +     EE+         +N  +++   E  +   L   E D  +  +E+   AG
Sbjct: 63  EQAKIMLESKSEEEVEFAKMIIDENSLKLEELEERLKILILPQDENDDKNIIVEIRGAAG 122

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMY+++A++  F+ + L  +     G       IKG  AY   K E G
Sbjct: 123 GDEANIFAGDLFRMYSKFADELGFRLKILSTNSASAGGFSQIVFSIKGEKAYSKFKFESG 182

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS +++ V P +DDS+EIEI  SD +ID +R+SGAGGQ VNTT
Sbjct: 183 VHRVQRVPVTESQGRIHTSTTTVTVMPEIDDSVEIEIKPSDLKIDVFRSSGAGGQSVNTT 242

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PT +VV  Q ERSQ  N+  A  +L++KLY+LE+QK+ E  +         
Sbjct: 243 DSAVRITHLPTNIVVTSQDERSQIANRETALTILKSKLYDLEMQKKAEEESGYRKLAGHG 302

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R +   +    +++G L   + A LA ++
Sbjct: 303 DRSEKIRTYNY-PQDRVTDHRISFSTS-LKPIMEGKLTPIIDALLAEEQ 349


>gi|261749632|ref|YP_003257318.1| peptide chain release factor 2 [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497725|gb|ACX84175.1| peptide chain release factor 2 [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 367

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 144/349 (41%), Positives = 227/349 (65%), Gaps = 3/349 (0%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +S ++N L  + + D   + +     K  + + W+N  +AK   +    +   I    E+
Sbjct: 10  ISEKINKLQEVLNIDQIKESIEKEEKKISNQNFWKNCKKAKNFTKRLHAMKTCIKNFFEL 69

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           ++ L +  IL  L+ EED    ++   +     K  +   +F++LLS E D  +A L++ 
Sbjct: 70  KNALEELEILFSLSKEEDLEKEVKIQLNKT---KNLLSNIEFKNLLSEEEDIFNAVLQIS 126

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +GAGGTES DW +ML+RMY  WAEK KF  + +    G+  GIKS TL + G  A+G+LK
Sbjct: 127 SGAGGTESCDWTSMLMRMYIMWAEKNKFSVKNIHHIPGDITGIKSVTLELDGLYAFGYLK 186

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
           GE GVHRL+R+SP+D+NS+RHTSFSS++VYP+VD  I+I I+ SD + +T+R+SG+GGQ+
Sbjct: 187 GENGVHRLIRLSPFDNNSKRHTSFSSVYVYPLVDKDIDININMSDIQWNTFRSSGSGGQN 246

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VN  +S VR+ H PTG++++  + RSQ +N+ +A ++L+++L+E+E+ K+ E  N  ESS
Sbjct: 247 VNKVESGVRLRHHPTGIIIENTETRSQMQNRQKALHLLKSRLFEIEISKKNEKKNKIESS 306

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           K +I WG QIR+Y++ PY++VKDLRT  E T    V++G++D F+K  L
Sbjct: 307 KKKIEWGSQIRNYIMHPYKLVKDLRTGYETTQIHSVMNGEIDIFLKKFL 355


>gi|123966944|ref|YP_001012025.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9515]
 gi|229470357|sp|A2BYQ7|RF1_PROM5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|123201310|gb|ABM72918.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT
           9515]
          Length = 364

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 99/348 (28%), Positives = 168/348 (48%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
              A +    L  +  DP +  N  + +++ +ER  L+  +    ++ D   +     +L
Sbjct: 10  LKTASKSFVNLEMQLADPDIANNPKKLELIAKERAKLEPLVLDFNQLLDTDKEIDDSRQL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130
             +  +   ++   +        ++    + +          D     LE+ AGAGG E+
Sbjct: 70  LKDNRNDKDMELLINEELCNLEVLKNSLIQKVTIALLPKDPRDERSVMLEIRAGAGGNEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+ +K  +  + +   + +  G K   + IKG + Y  LK E GVHR+
Sbjct: 130 CIWAGDLARMYERYGQKIGWSVKPISASESDMGGFKELVISIKGDSVYSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +E++I  SD  I T R+ GAGGQ+VN  ++A+
Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADPVEVKIDPSDLEIGTARSGGAGGQNVNKVETAI 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C QERSQ +N+ +A  +LRAKLYE++L+  E           ++G G 
Sbjct: 249 DLIHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLK--EANDKERSQRLMQVGTGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R      +   +L G LD+ + A +A ++
Sbjct: 307 RSEKIRTYNFKD-NRTTDHRLG-SNFALEPILAGQLDEVIDACIAQEQ 352


>gi|282898121|ref|ZP_06306116.1| Peptide chain release factor 2 [Raphidiopsis brookii D9]
 gi|281197265|gb|EFA72166.1| Peptide chain release factor 2 [Raphidiopsis brookii D9]
          Length = 290

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 130/266 (48%), Positives = 182/266 (68%)

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
              + ++  +++  + + LLSG  DS  A L ++AGAGGT++QDWA ML+RMYTRWAE  
Sbjct: 17  ETTINQMHRDLDQWELQQLLSGPYDSQGAVLTINAGAGGTDAQDWAFMLMRMYTRWAEAH 76

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +K    E  +G+EAGIKSATL I G  AYG+L+ E G HRLVRISP+++N +R TSF+ 
Sbjct: 77  GYKVTLAEESEGDEAGIKSATLEITGRYAYGYLRAEMGTHRLVRISPFNANGKRQTSFAG 136

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P +D+S+ +EI E D  + T RA G GGQ+VN  ++AVRI HIPTG+ V+C +ERS
Sbjct: 137 VEVMPQIDNSVTLEIPEKDLEVTTSRAGGKGGQNVNKVETAVRIVHIPTGIAVRCTEERS 196

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           Q +NK +A   L+AKL  +  ++R +          E  WG QIR+YV  PYQ+VKDLRT
Sbjct: 197 QLQNKEKALARLKAKLLVIAREQRAQEIAEIRGDMVEASWGNQIRNYVFHPYQIVKDLRT 256

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
           N+E T+  DV++GDLD+F++A L  +
Sbjct: 257 NLETTAIIDVMNGDLDNFIQAYLRQE 282


>gi|284929590|ref|YP_003422112.1| peptide chain release factor 1 [cyanobacterium UCYN-A]
 gi|284810034|gb|ADB95731.1| bacterial peptide chain release factor 1 (bRF-1) [cyanobacterium
           UCYN-A]
          Length = 367

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 97/348 (27%), Positives = 175/348 (50%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q  + L  +  DP +  N  E + + + R  L+  ++  ++ +    + L   ++
Sbjct: 10  LHSVEQTFNELTRRLADPSIATNPNELQKVAKTRSSLEETVNAYEQWKKTEKELLETKQI 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY-----KQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +      ++E +    +             +   L     D  +  LE+ AG GG E+
Sbjct: 70  VKDAGGDHEMREMASIEAKELEIKLNNLEELMKILLLPRDPNDDKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY+R+AE + +  +       +  GIK   L I G   +  LK E GVHR+
Sbjct: 130 SIWAGDLARMYSRYAESQNWVVKLANESLADMGGIKETILEITGDKVFSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P   D +E++I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPVTEAGGRVHTSTATVAIMP-EVDEVEVKIDAKDIDMSTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +N+ +A  +LRAKLYE +L++++E   I    K+++G G 
Sbjct: 249 DLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEAKLREQQEE--ISSMRKSQVGTGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R   +  + S +L+GD+D  +++ ++  +
Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLG-QNFALSGILEGDIDILIESCISQDQ 352


>gi|282877960|ref|ZP_06286769.1| peptide chain release factor 1 [Prevotella buccalis ATCC 35310]
 gi|281299961|gb|EFA92321.1| peptide chain release factor 1 [Prevotella buccalis ATCC 35310]
          Length = 370

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 90/350 (25%), Positives = 153/350 (43%), Gaps = 19/350 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    R   ++T    P +  +      L +E + L + +   K     L       ++
Sbjct: 11  LEGLEARFEEVSTLITAPDVIADQPRYVKLTKEYKDLGDIMDIRKRYIACLNAIRESKDI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + LQ  +      + E           D+ +  +E+ AG GG E+ 
Sbjct: 71  LANETDADMKEMAREELQANEDMQPQLEEEIKLALVPKDPEDAKNVQMEIRAGTGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY  + + + +      +++G   G K     + G N YG LK E GVHR+ 
Sbjct: 131 LFAGDLFNMYKHYCDSKGWTLSVTSVNEGSVGGYKEIDFAVSGDNVYGTLKYESGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P  D      I+E D + DT+R+SGAGGQ+VN  +S VR
Sbjct: 191 RVPATETQGRMHTSAATVAVLPEADQFEVN-INEGDIKWDTFRSSGAGGQNVNKVESGVR 249

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + +            ++++C + R Q KNK +A + LR  +Y+ E QK   I +I    K
Sbjct: 250 LRYPWKNPNTGEVEEILIECTETRDQPKNKERALSRLRTFIYDREHQKY--IDDIANRRK 307

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           + +  G +   IR+Y   P   V D R           ++GD+   + A 
Sbjct: 308 SLVSTGDRSAKIRTYNY-PQGRVTDHRIGYTTHDLQGFVNGDIQAMIDAL 356


>gi|237750909|ref|ZP_04581389.1| peptide chain release factor 1 [Helicobacter bilis ATCC 43879]
 gi|229373354|gb|EEO23745.1| peptide chain release factor 1 [Helicobacter bilis ATCC 43879]
          Length = 356

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 110/345 (31%), Positives = 173/345 (50%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               ++R   L        +  ++ +   L +E+   D  ++  KE    L D      L
Sbjct: 6   LKPIIERNDALAAMLSTEEVINDIAKLTALSKEKSESDEIVAKAKEYLKVLDDITSNKAL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  +    +  +   +     D  + YLE+ AG GG E+  + 
Sbjct: 66  LEDKELGELAKEELKELEIAQKNLEDEIKILLIPKDPNDKKNIYLEIRAGTGGDEAGIFV 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L   Y R+A+ +++K E +   +    G K    L+KG  AY  LK E G HR+ R+ 
Sbjct: 126 GDLFSAYCRYADSKQWKVEIISSSENSVGGYKEMIALVKGDGAYSRLKYEGGTHRVQRVP 185

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P VD      I+ +D +ID +R+ G GGQ VNTTDSAVRITH
Sbjct: 186 KTESQGRIHTSAITVAIMPEVDSLEIN-INPNDLKIDVFRSGGHGGQSVNTTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+ V  Q E+SQHKNK +A  +L+A+LYE EL+ +   A   ES K ++G G    +
Sbjct: 245 IPTGISVSMQDEKSQHKNKDKALKILQARLYEAELEAQN--AQNRESRKNQVGSGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+   S  +++  GDLD  +   +A  +
Sbjct: 303 IRTYNY-PQNRMSDHRINLTLYSLEEIMLSGDLDKVIDPLIAHAQ 346


>gi|33866628|ref|NP_898187.1| peptide chain release factor 1 [Synechococcus sp. WH 8102]
 gi|46576726|sp|Q7U4H2|RF1_SYNPX RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33633406|emb|CAE08611.1| peptide chain release factor RF-1 [Synechococcus sp. WH 8102]
          Length = 365

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 102/348 (29%), Positives = 170/348 (48%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72
            + A      L  +  DP +  +    + + RER  L+  +   +E+   +     +  L
Sbjct: 10  LEAATASFRNLERQLADPDVAADPTRLEKIARERARLEPLVLDFEELQVLEGEQKQSREL 69

Query: 73  LELALEEDDCSI--LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           L+    +         + +   +R     E      L     D     LE+ AGAGG E+
Sbjct: 70  LKECRGDAAMEELAQDDLASLNRRHAELTEKLTVALLPRDPRDERSVMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+++K  +  + +  ++ +  G +   L +KG + +  LK E GVHR+
Sbjct: 130 CIWAGDLARMYERYSQKLGWNVQPISSNEADLGGFRELILSVKGDSVFSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D++E+++   D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADAVEVQLDPKDLEISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H P+G+ V C QERSQ +N+ +A  +LRAKL  LE ++RE  A      + ++G G 
Sbjct: 249 DLLHKPSGIRVFCTQERSQLQNRERALEILRAKL--LEQEQREAAARESSDRRAQVGSGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R     +    VLDG L+D + A +A ++
Sbjct: 307 RSEKIRTYNYKD-NRTTDHRLGRNFS-LDPVLDGQLEDLIGACIAEEQ 352


>gi|319957818|ref|YP_004169081.1| bacterial peptide chain release factor 1 (brf-1) [Nitratifractor
           salsuginis DSM 16511]
 gi|319420222|gb|ADV47332.1| bacterial peptide chain release factor 1 (bRF-1) [Nitratifractor
           salsuginis DSM 16511]
          Length = 355

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 100/341 (29%), Positives = 174/341 (51%), Gaps = 9/341 (2%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           + R   +N     P +  +V +   L +E+  +   +   ++  +          +  + 
Sbjct: 10  IDRYEEINRLLSSPEIAADVKKMTELSKEQSSIAPLVEKAQKYLEISEAIEENKAMLSDP 69

Query: 80  DDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +   + +E    L+       E  +   +     D  + YLE+ AGAGG ES  +   + 
Sbjct: 70  EFGELAKEELSELEPQLPRLEEEIKVLMIPKDPNDDKNIYLELRAGAGGDESALFVEDMF 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           +MY R+AE++ +K E +   +G   G K    L+KG   Y  LK E G HR+ R+   ++
Sbjct: 130 KMYLRFAERQGWKVEIVSSSEGTAGGYKELIALVKGEGVYSKLKFEAGTHRVQRVPATET 189

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS  ++ V P   + +EI+I  ++ ++D YR+SG GGQ VNTTDSAVR+TH+PTG
Sbjct: 190 QGRVHTSAITVAVIP-EVEDVEIDIKPNEIKMDVYRSSGCGGQSVNTTDSAVRLTHLPTG 248

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315
           +VV  Q E+SQHKN+ +A  +L+A+++E  ++++ E        K ++G G    +IR+Y
Sbjct: 249 IVVAIQDEKSQHKNRDKAMKVLKARVHEAMMREQMEE--TAGQRKLQVGSGDRSEKIRTY 306

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
              P   + D R  +   +  DV+ +G L+  +   +A  +
Sbjct: 307 NY-PQNRITDHRIGLTLYALDDVMNNGTLEQVIDPLIAHAQ 346


>gi|72383384|ref|YP_292739.1| peptide chain release factor 2 [Prochlorococcus marinus str.
           NATL2A]
 gi|72003234|gb|AAZ59036.1| bacterial peptide chain release factor 2 (bRF-2) [Prochlorococcus
           marinus str. NATL2A]
          Length = 313

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 139/308 (45%), Positives = 198/308 (64%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MR+   +   +  +   +  + D  + +EL   + D  IL E  + L+++K E+E  + E
Sbjct: 1   MRQLDEVKAELEKLITWRGAIEDANLSVELYELDPDEEILSEAHNGLEQLKQELERWETE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSG  D   A L ++AGAGGT++QDWA MLLRMYTRWAE    K    E+ +GEEAGI
Sbjct: 61  RLLSGIYDKEGAVLSINAGAGGTDAQDWAQMLLRMYTRWAENNGMKVSINELSEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KS T+ I+G  AYG+L+ E+G HRLVRISP+++N +R TSF+ + V P +D+ +E+EI E
Sbjct: 121 KSVTIEIEGVYAYGFLQNEKGTHRLVRISPFNANGKRQTSFAGVEVMPKLDEEVELEIPE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D  I T R+ GAGGQ+VN  ++AVRI H+PTG+ V+C QERSQ +NK +A  +L++KL 
Sbjct: 181 KDLEITTSRSGGAGGQNVNKVETAVRILHVPTGIAVRCTQERSQLQNKDKAMALLKSKLM 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            + +++R            E  WG QIR+YV  PYQMVKDLRT  E T    V++G +D 
Sbjct: 241 VIAVEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQMVKDLRTEQETTDVDSVMNGKIDI 300

Query: 346 FMKATLAI 353
           F+++ L  
Sbjct: 301 FIQSLLRQ 308


>gi|186684480|ref|YP_001867676.1| peptide chain release factor 1 [Nostoc punctiforme PCC 73102]
 gi|238691196|sp|B2ITM5|RF1_NOSP7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|186466932|gb|ACC82733.1| peptide chain release factor 1 [Nostoc punctiforme PCC 73102]
          Length = 365

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 106/348 (30%), Positives = 177/348 (50%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q  + L  +  DP    N  E + + + R  L+  ++  +  +    D +   E+
Sbjct: 10  LKSVEQTFNELTRRLGDPDTASNPDEYQEIAKSRSSLEEVVNTYEIWKTAQEDLIGAREV 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130
             E      LQE +    +   E         +   L     D  +  LE+ AG GG E+
Sbjct: 70  YKESASDPELQEMASLEVKELEEKIEHLESRLKVLLLPRDPNDEKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L++MYTR+A+ + +K   +    GE  G K   L IKG + Y  LK E GVHR+
Sbjct: 130 SIWAGDLMQMYTRYAQTQGWKVSLVSESRGEMGGWKEVILEIKGNDVYSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ + P   D +EI I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESGGRVHTSTATVAIMP-EVDDVEIHIDPKDIEMTTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +NK +A  +LRAKLY+++L +++  A +    ++++G G 
Sbjct: 249 DLMHKPTGIRIFCTEERSQLQNKERAMQILRAKLYDIKLGEQQ--AAVTSMRRSQVGTGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R   +  S + VLDGDL+  +++ +++ +
Sbjct: 307 RSEKIRTYNYKD-NRATDHRLG-QNYSLTPVLDGDLETLIQSCISLDQ 352


>gi|270308380|ref|YP_003330438.1| peptide chain release factor 1 [Dehalococcoides sp. VS]
 gi|270154272|gb|ACZ62110.1| peptide chain release factor 1 [Dehalococcoides sp. VS]
          Length = 355

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 100/345 (28%), Positives = 171/345 (49%), Gaps = 7/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N  +R   +  +   P +  +    + L +ER  L   +   +  +    +      L
Sbjct: 5   LENCEKRFREIEEEISKPEVINDARLVRTLAQERADLQTKVEMYRRYKAMSKELEEAKNL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  +       ++ ++  +    E    E L     D     +E+ AG GG E+ 
Sbjct: 65  LEIEKDEDMRDMVRGEIENLEKSMANLYEQMTLELLPKDPNDDKSIIMEIRAGTGGDEAG 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L +MYTR+A  + +KTE ++I+      IK     + G  A+  LK E+GVHR+ 
Sbjct: 125 LFAADLYKMYTRYALLKNWKTEVIDINGNVAGIIKEVVFEVNGKGAFSRLKYERGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS +++ V P   + ++I+I+  D R+D + +SGAGGQ+V    +A+R
Sbjct: 185 RVPQTEASGRIHTSTATVAVLP-QAEEVDIDINMDDVRVDIFHSSGAGGQNVQKVATAIR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA-NIGESSKTEIGWGR 310
           +THIPTG+VV CQ ERSQ KNK +A+ +LRA+L ELE  K +E       +   +     
Sbjct: 244 LTHIPTGLVVCCQDERSQLKNKNKAFAVLRARLMELEQSKVDEERTESRRAQVGQADRSE 303

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   + D R  +   +   +L+G LD+ +      ++
Sbjct: 304 KIRTYNF-PQDRLTDHRIGLTAHNLPHILEGYLDEIIDTLATHEQ 347


>gi|33862085|ref|NP_893646.1| peptide chain release factor 1 [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
 gi|81575585|sp|Q7UZX1|RF1_PROMP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33634303|emb|CAE19988.1| peptide chain release factor RF-1 [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
          Length = 364

 Score =  203 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 104/348 (29%), Positives = 171/348 (49%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             NA +    L  +  DP +  N  + + + RER  L+  +    ++ D   +     +L
Sbjct: 10  LKNASESFVNLEMQLADPDIANNPKKLESIARERAKLEPLVLDFNQLLDTDKEIGDSKQL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130
             E  +   ++   +       +++ +  E L          D     LE+ AGAGG E+
Sbjct: 70  LKENRNDKDMESLINEELFSLEDLKNQLIEKLTIALLPKDPRDERSVMLEIRAGAGGNEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+ +K  +  + +   + +  G K   + +KG + Y  LK E GVHR+
Sbjct: 130 CIWAGDLARMYERYGQKIGWTVKPISASESDMGGFKELVISVKGDSVYSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +E++I  ++  I T R+ GAGGQ+VN  ++A+
Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADPVEVKIDPTEIEIGTARSGGAGGQNVNKVETAI 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C QERSQ +N+ +A  +LRAKLYE++L+  E  A        ++G G 
Sbjct: 249 DLIHKPTGIRVFCTQERSQLQNRERAMEILRAKLYEIQLK--EANAKERSQRLMQVGSGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R      +   +L G LDD + A LA ++
Sbjct: 307 RSEKIRTYNFKD-NRTTDHRLG-SNFALEPILAGQLDDVIYACLAQEQ 352


>gi|237800110|ref|ZP_04588571.1| peptide chain release factor 2 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|257487126|ref|ZP_05641167.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|320323152|gb|EFW79241.1| peptide chain release factor 2 [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320329576|gb|EFW85565.1| peptide chain release factor 2 [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330867549|gb|EGH02258.1| peptide chain release factor 2 [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|330872776|gb|EGH06925.1| peptide chain release factor 2 [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330878328|gb|EGH12477.1| peptide chain release factor 2 [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330894559|gb|EGH27220.1| peptide chain release factor 2 [Pseudomonas syringae pv. mori str.
           301020]
 gi|330959166|gb|EGH59426.1| peptide chain release factor 2 [Pseudomonas syringae pv. maculicola
           str. ES4326]
 gi|330964102|gb|EGH64362.1| peptide chain release factor 2 [Pseudomonas syringae pv. actinidiae
           str. M302091]
 gi|330985076|gb|EGH83179.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
           syringae pv. lachrymans str. M301315]
 gi|331009249|gb|EGH89305.1| peptide chain release factor 2 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|331022966|gb|EGI03023.1| peptide chain release factor 2 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 248

 Score =  203 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 154/247 (62%), Positives = 192/247 (77%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + SGE D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+  GE AGIK
Sbjct: 1   MFSGEMDPNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            AT+ IKG  A+GWL+ E GVHRLVR SP+DS +RRHTSFS+++V P +DD+IEI+I+ S
Sbjct: 61  GATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEIDDNIEIDINPS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDTYR+SGAGGQHVNTTDSAVRITH+PT  VV CQ ERSQH NK  A  MLRA+LYE
Sbjct: 121 DLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E+QKR   +   E +K++IGWG QIRSYVL     +KDLRTNIE++    VLDGD+D++
Sbjct: 181 QEVQKRNAASQALEDTKSDIGWGHQIRSYVLD-ASRIKDLRTNIERSDCDKVLDGDIDEY 239

Query: 347 MKATLAI 353
           + A+L  
Sbjct: 240 LIASLKQ 246


>gi|311743960|ref|ZP_07717766.1| peptide chain release factor RF1 [Aeromicrobium marinum DSM 15272]
 gi|311313090|gb|EFQ83001.1| peptide chain release factor RF1 [Aeromicrobium marinum DSM 15272]
          Length = 353

 Score =  203 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 119/353 (33%), Positives = 178/353 (50%), Gaps = 22/353 (6%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD  +  V   + L  K  DP +  + ++AK + +    L   I   +E Q    D   
Sbjct: 1   MFDAVETLVAEHAELERKMADPSVHADPVQAKRIGQRYAELTAVIRTYREWQQTGDDLQA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EL +++D   +               E  Q   +     D+ D  LE+  G GG ES 
Sbjct: 61  ARELRMDDDVVQLEARLP-------ELGERLQRLLVPRDPGDAKDVILEIKGGEGGEESA 113

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGE 184
            +A  LLRMYTR+AE+R ++ + L+  +    G KS T  +        G      LK E
Sbjct: 114 LFAADLLRMYTRFAERRGWRVDILDSTESALGGYKSVTAAVKARSTPEPGEAPGALLKFE 173

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +S  R HTS + + V P   + +++EI +SD RID YR+SG GGQ VN
Sbjct: 174 GGVHRVQRVPVTESQGRIHTSAAGVLVLP-EAEDVDVEIHDSDLRIDVYRSSGPGGQSVN 232

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRITH+PTGVV  CQ E+SQ +NK QA  +LRA+L  LE  +    A   ++ ++
Sbjct: 233 TTDSAVRITHVPTGVVASCQNEKSQLQNKEQALRILRARL--LEAAQATADAEASDARRS 290

Query: 305 EI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +I       ++R+Y   P   + D RT  +  +   V+DG L+D + + +   
Sbjct: 291 QIRTVDRSERVRTYNF-PENRISDHRTGFKAYNLDAVMDGGLEDVIGSLVEAD 342


>gi|148555445|ref|YP_001263027.1| peptide chain release factor 1 [Sphingomonas wittichii RW1]
 gi|166223608|sp|A5V9C3|RF1_SPHWW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|148500635|gb|ABQ68889.1| bacterial peptide chain release factor 1 (bRF-1) [Sphingomonas
           wittichii RW1]
          Length = 360

 Score =  203 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 112/348 (32%), Positives = 171/348 (49%), Gaps = 15/348 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L        L  +      L ++   ++       E++    +  +L  +
Sbjct: 9   IAQIEARRDELQALMARGDLPSDQ--FVQLSKDYAEIEPVAQAAGEVRRLRAELDVLKGM 66

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTES 130
           A +E   +       +  + I+  +   +     + L    AD   A LE+ AG GG E+
Sbjct: 67  AEDEAGDAELRAMAIEEAEEIRARLPEAERALALKLLPRDAADERSAMLEIRAGTGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+AE R ++ E +     +  G K     + G   +  LK E GVHR+
Sbjct: 127 ALFAGDLFRMYQRYAEDRGWRVELISASAADLGGYKEVVASVTGAGVFARLKFESGVHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +++ I + D RID YR+SG GGQ VNTTDSAV
Sbjct: 187 QRVPVTESGGRIHTSAATVAVLP-EAEEVDVHIDDKDLRIDVYRSSGPGGQSVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VV  Q E+SQHKNKA+A  +LR +LYE+E ++           K+ +G G 
Sbjct: 246 RITHLPTGLVVIQQDEKSQHKNKAKALKVLRTRLYEMERERLASERAGA--RKSMVGSGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIK 354
              +IR+Y   P   V D R N+     S++L+G  LDD + A +A  
Sbjct: 304 RSERIRTYNF-PQGRVTDHRINLTLHRLSEILEGPGLDDLVGALIAED 350


>gi|119484803|ref|ZP_01619285.1| Peptide chain release factor 1 [Lyngbya sp. PCC 8106]
 gi|119457621|gb|EAW38745.1| Peptide chain release factor 1 [Lyngbya sp. PCC 8106]
          Length = 368

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 104/352 (29%), Positives = 182/352 (51%), Gaps = 19/352 (5%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  L          Q  + L  +  DP +  N  E + + +ER  ++  ++  +  +   
Sbjct: 7   IEKLRSF------EQTFNELTLRLADPDVSNNPTELQRIAKERSSIEEVVNTYQLWKTAQ 60

Query: 67  CDNLILLELALEEDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            +     ++  E  +   ++E       +   +++    + +   L S   D  +  LE+
Sbjct: 61  EELTGARQVQKEAGEDPEMKEMAALEVEELQNQLEQLETHLKVLLLPSDPNDDKNIMLEI 120

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG GG E+  WA  L+RMY+R+AE +K++ + +     +  G K A L IKG   Y  L
Sbjct: 121 RAGTGGDEASIWAGDLVRMYSRYAEGQKWQVKIVSESSADMGGFKEAILEIKGDQVYSKL 180

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   ++  R HTS +++ V P   D +++EI   D  + T R+ GAGGQ
Sbjct: 181 KFEAGVHRVQRVPLTEAGGRVHTSTATVAVMP-EVDEVDVEIDPKDIEMSTARSGGAGGQ 239

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++AV + H PTG+ + C +ERSQ +N+ +A  +LRAKLYE++L++++E   +   
Sbjct: 240 NVNKVETAVDLIHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLREQQE--AVTSM 297

Query: 302 SKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            ++++G G    +IR+Y  +    V D R   +  S S VL+G +DD + A 
Sbjct: 298 RRSQVGTGARSEKIRTYNYKD-NRVTDHRLG-QNFSLSPVLEGGMDDVVDAC 347


>gi|56552405|ref|YP_163244.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|241761553|ref|ZP_04759640.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|260753918|ref|YP_003226811.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|81598182|sp|Q5NMC7|RF1_ZYMMO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56543979|gb|AAV90133.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|241373861|gb|EER63394.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|258553281|gb|ACV76227.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 358

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 113/346 (32%), Positives = 169/346 (48%), Gaps = 13/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               + R   L  +   P L  +      L RE   ++      + +     +   L  +
Sbjct: 9   LAAIIARREELQAEMARPDL--DSNRLVALSREYSEVEPVALAAENVGRLREEGETLEAM 66

Query: 76  ALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             ++D         +   N   +           L    AD   A LE+ AG GG E+  
Sbjct: 67  TKDDDPELQAMAVEELEANKTALAEAERALALSLLPRDAADERSAILEIRAGTGGDEAAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +   LLRMY+R+AE+  ++ E +     E  G K   + I G   +  LK E GVHR+ R
Sbjct: 127 FGGDLLRMYSRYAEEHGWRVEMISASAAELGGYKEVVISITGAGVFARLKFESGVHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P   + ++++I E D RID +R+SG GGQ VNTTDSAVRI
Sbjct: 187 VPVTESGGRIHTSAATVAVLP-EAEEVDVDIDERDLRIDIFRSSGPGGQSVNTTDSAVRI 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIP+G+VV  Q E+SQHKNKA+A  +LRA+LYE E ++    +      K+ +G G   
Sbjct: 246 THIPSGIVVSQQDEKSQHKNKAKAMKVLRARLYERERERL--HSERAGQRKSMVGSGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIK 354
            +IR+Y   P   V D R N+      ++L G  LD+ + A +A  
Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTLHRLPEILAGPGLDEVISALIAED 348


>gi|306835871|ref|ZP_07468866.1| peptide chain release factor RF1 [Corynebacterium accolens ATCC
           49726]
 gi|304568236|gb|EFM43806.1| peptide chain release factor RF1 [Corynebacterium accolens ATCC
           49726]
          Length = 358

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 176/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V     +  +  DP +  +    + L +    L   I   +E+     D     E+
Sbjct: 8   VDDIVSEYQGIEMQMGDPEIAGDQQAFRKLSKRYAELRPIIKVNEELTQAREDLADAKEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D    +E       ++   E          E DS D  +E+ AGAGG E+  +A 
Sbjct: 68  --AYEDHDFQEEADRLAASVEELEEKLADLLAPRDEQDSEDIIMEIKAGAGGEEAALFAG 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190
            L RMY R+A+K  FK E L +++ +  G+K  T+  +        A+   K E GVHR+
Sbjct: 126 DLARMYERFADKIDFKWEVLGLNESDLGGVKDMTISFRAKSPTRDGAWSVFKFEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R  TS + + VYP  ++   + I + D R+D YR+SG GGQ VNTTDSAV
Sbjct: 186 QRVPVTESQGRIQTSAAGVLVYPEPEEVESVNIDDKDIRVDVYRSSGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG++V CQ+ERSQ +NKA+A  +L+A+L ++E + RE  A    +S+   +   
Sbjct: 246 RITHLPTGLIVTCQKERSQIQNKARALQVLQARLDQMEREAREAEAGEQRASQVRTMDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            ++R+Y   P   + D R   +  +   VL+GD+ D +KA    ++
Sbjct: 306 ERVRTYNW-PENRITDHRIGYKANNLDSVLNGDMQDLIKALQDQER 350


>gi|72162818|ref|YP_290475.1| peptide chain release factor 1 [Thermobifida fusca YX]
 gi|119361632|sp|Q47M70|RF1_THEFY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71916550|gb|AAZ56452.1| bacterial peptide chain release factor 1 (bRF-1) [Thermobifida
           fusca YX]
          Length = 355

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 119/349 (34%), Positives = 174/349 (49%), Gaps = 12/349 (3%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
              D+ +     L  +  DP +  +  +A+ L +    L   ++  +E+     D     
Sbjct: 1   MKLDDLLGEYYELEQQLADPAVHADQAQARTLAKRYSQLTPIVATYRELNRVESDIETAQ 60

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           EL    +D S   E      + +  V+  +   +     D  D  LEV AG GG ES  +
Sbjct: 61  EL--AAEDPSFADEAKQLAAQREELVQRLRTLLIPRDPNDDKDVILEVKAGEGGEESALF 118

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-------YGWLKGEQG 186
           A+ L+RMY R+AE++ +KTE +     +  G K  T+ IK           +  LK E G
Sbjct: 119 ASDLVRMYLRYAERQGWKTEIISATHSDLGGYKDITIAIKNRGTVEPGQGVWHRLKFEGG 178

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS   + V P   + IE+EI+ESD RID YR+SG GGQ VNTT
Sbjct: 179 VHRVQRVPVTESQGRIHTSAVGVLVLP-EAEEIEVEINESDLRIDVYRSSGPGGQSVNTT 237

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE- 305
           DSAVRITH+PTG+VV CQ E+SQ +NK QA  +LRA+L        E  A     S+   
Sbjct: 238 DSAVRITHLPTGIVVSCQNEKSQLQNKEQALRVLRARLLAEAQAAAEAEAAAERRSQVRT 297

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +    ++R+Y   P   + D R   +  +   VLDG+LD  ++A +   
Sbjct: 298 VDRSERVRTYNF-PENRISDHRVGYKAYNLDQVLDGELDGVIQALVDAD 345


>gi|126658019|ref|ZP_01729171.1| peptide chain release factor 1 [Cyanothece sp. CCY0110]
 gi|126620657|gb|EAZ91374.1| peptide chain release factor 1 [Cyanothece sp. CCY0110]
          Length = 369

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 99/348 (28%), Positives = 179/348 (51%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q    L  +  DP +  N  E + + + R  L+  ++  K  Q+   +     ++
Sbjct: 10  LQSVEQTYQELTRRLADPDIATNPDELQRVAKARSSLEETVNTYKTWQETQEELKGAKQI 69

Query: 76  ALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E      ++E +        ++++   E  +   L     D  +  LE+ AG GG E+
Sbjct: 70  VKEAGGDPEMREMAAMEVSELEEQLQQLEEQLKILLLPRDPNDDKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY+R+AE +K+  + +     +  G K A L I G   Y  LK E GVHR+
Sbjct: 130 SIWAGDLVRMYSRYAESQKWNVKLVSESLADMGGFKEAILEITGDQVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P   D +EI+I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPVTEAGGRVHTSTATVAIMP-EVDEVEIQIDPKDIEMTTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +N+ +A  +LRAKLYE +L++++E   +    ++++G G 
Sbjct: 249 DLMHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEAKLREQQE--AVSSMRRSQVGTGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R   +  + +  L+G++D+ ++  ++  +
Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLG-QNFALAGALEGNIDNIIETCISQDQ 352


>gi|22297692|ref|NP_680939.1| peptide chain release factor 1 [Thermosynechococcus elongatus BP-1]
 gi|32171539|sp|Q8DMG9|RF1_THEEB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|22293869|dbj|BAC07701.1| peptide chain release factor 1 [Thermosynechococcus elongatus BP-1]
          Length = 364

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 110/348 (31%), Positives = 181/348 (52%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                Q  + L  +  DP +  N  E + + R R  L+  ++   E Q      +   +L
Sbjct: 10  LRTVEQTFTELTRRLADPDVAVNPTEFQKVARSRAALEETVNAYHEWQSLNQQLVDARQL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130
             E  +   L++ ++           +     +   L     D  +  LE+ AGAGG E+
Sbjct: 70  HKEAANEPELRQMAEEEIAHLSHRIAQLEERLKILLLPRDPNDEKNIMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY+R+A+ + ++   +     E  G K A L IKG   Y  LK E GVHR+
Sbjct: 130 GIWAGDLVRMYSRYAKTQGWQVTLVSESLAEMGGFKEAILEIKGDRVYSKLKYESGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +++ R HTS +++ V P   D +E+EI   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATEASGRIHTSTATVAVMP-EVDEVEVEIDPKDIELTTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ KNK +A+ +LRAKLYE++L++++E   I    ++++G G 
Sbjct: 249 DLYHKPTGIRIFCTEERSQLKNKERAFQILRAKLYEIKLREQQE--AITSMRRSQVGTGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R   +  S S VL+GDL+  ++A ++  +
Sbjct: 307 RSEKIRTYNYKD-DRVTDHRLG-QNFSLSSVLEGDLEPIIQACISRDQ 352


>gi|319406093|emb|CBI79723.1| peptide chain release factor 1 [Bartonella sp. AR 15-3]
          Length = 359

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 118/348 (33%), Positives = 180/348 (51%), Gaps = 18/348 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               +R   + ++  + P    N      L  E   L   I  I+ +     +   +  +
Sbjct: 10  KQLEKRFKIIESQMAENP----NAETYVKLASEYAELQPIIVSIRALNSLCKEITDIETI 65

Query: 76  ALEEDDCSILQETSDN-----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  +        Q+I+   +  Q   L    AD     +E+ AG GG+E+
Sbjct: 66  ISDTQTDTEMRNLAQEELSSLYQKIQELEQELQILLLPKDIADEKSVIIEIRAGTGGSEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A    +K E + + DGE  G K     I G   +  LK E GVHR+
Sbjct: 126 ALFAGDLFRMYERYANTHNWKVEVISLSDGEVGGYKEIIATISGKGVFSKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            RI   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 186 QRIPETETGGRIHTSAATVAVLP-EAEEIDIEICPEDIRIDTMRASGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+L+++E QK    +    S KT++G G 
Sbjct: 245 RITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQK--AESERSASRKTQVGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       +++GDL++ + A ++  +
Sbjct: 302 RSERIRTYNF-PQGRVTDHRINMTLYKLDRIMEGDLNELINALISDHQ 348


>gi|170742857|ref|YP_001771512.1| peptide chain release factor 1 [Methylobacterium sp. 4-46]
 gi|226739116|sp|B0UAV4|RF1_METS4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|168197131|gb|ACA19078.1| peptide chain release factor 1 [Methylobacterium sp. 4-46]
          Length = 359

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 110/347 (31%), Positives = 172/347 (49%), Gaps = 13/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   +           +      L RE   LD+ ++ I+  +    +   +  +
Sbjct: 9   LDAILARHDIVTATLSAGE--ADSESFVQLSRELSDLDDVVAAIRAYRAAEAELRGVEAM 66

Query: 76  ALEEDDCSILQETSDN---LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E D         +            +  Q   L    AD   A LE+ AG GG E+  
Sbjct: 67  LQEGDPEMRALAAEEKPEVEAARDAAAKALQIMLLPKDAADEKSAILEIRAGTGGDEAAL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LLRMY R+A+ + +K E +    G   G +     +KG   +  LK E G HR+ R
Sbjct: 127 FAGDLLRMYARYADLKGWKIEVVSESPGTMGGYREVVAEVKGRGVFARLKFESGAHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P   + ++I ++E+D +IDT RA GAGGQHVN T+SA+RI
Sbjct: 187 VPETETQGRIHTSAATVAVLP-EAEEVDIHVNEADLKIDTMRAQGAGGQHVNKTESAIRI 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIP+G+VV  Q+ERSQHKN+A+A  +LRA+LY  E ++ ++ A      + ++G G   
Sbjct: 246 THIPSGIVVFVQEERSQHKNRARAMAVLRARLY--EQERSQKDAARAADRRAQVGSGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+      +VL G  LD+ + A +   +
Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTLYKLEEVLAGTALDELVDALVTEHQ 349


>gi|284050702|ref|ZP_06380912.1| peptide chain release factor 1 [Arthrospira platensis str. Paraca]
 gi|291567816|dbj|BAI90088.1| peptide chain release factor 1 [Arthrospira platensis NIES-39]
          Length = 371

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 101/351 (28%), Positives = 174/351 (49%), Gaps = 16/351 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q    L  +  DP +  +  E + + + R  L++ ++  +E +    +     ++
Sbjct: 10  LKSVEQTFQELTLRLADPEIATDPDEFQRVAKTRSSLEDVVNAYQEWKTTQTELAGAKQI 69

Query: 76  --------ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
                    L+E       E  +   +++      +   L     D  +  LE+ AG GG
Sbjct: 70  LRETGNDPELKEMKEMAALEVEELTTKLQELETRLKILLLPQDPNDDKNIMLEIRAGTGG 129

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  WA  L+RMY+R+AE + ++   L     +  G K A L I+G   Y  LK E GV
Sbjct: 130 DEASIWAGDLVRMYSRYAETKGWRVRLLSESLADMGGFKEAILEIQGDRVYSQLKFEAGV 189

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ + P   D +E++I   D  + T R+ GAGGQ+VN  +
Sbjct: 190 HRVQRVPVTEAGGRVHTSTATVAIMP-EVDDVEVQIDAKDIEMTTARSGGAGGQNVNKVE 248

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           +AV + H PTG+ V C +ERSQ KN+ +A  +LRAKLYE +L  RE+   +    ++++G
Sbjct: 249 TAVDLFHKPTGIRVFCTEERSQLKNRERAMQILRAKLYEAKL--REQQDAVTSMRRSQVG 306

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y  +    V D R     +  + VL+G + D ++A +   +
Sbjct: 307 TGSRSEKIRTYNYKD-NRVTDHRLGHNFS-LAPVLEGGIGDLIQACVIQDQ 355


>gi|188995108|ref|YP_001929360.1| putative peptide chain release factor RF-2 [Porphyromonas
           gingivalis ATCC 33277]
 gi|188594788|dbj|BAG33763.1| putative peptide chain release factor RF-2 [Porphyromonas
           gingivalis ATCC 33277]
          Length = 319

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 129/315 (40%), Positives = 197/315 (62%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MR+ + L + I +   I     +  +  E     +  S  +E  +        +E  + +
Sbjct: 1   MRKVKELKSWIGYYDAIDTATEEVKLAYEYCK--EGISTEEEVDEAYAHAIRLIEEVELK 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  E D   A L+V+AGAGGTESQDWA+ML+RMY RWA+K+ ++       DG+EAGI
Sbjct: 59  NMLRSEEDHFGAVLKVNAGAGGTESQDWASMLVRMYQRWADKQGYQVTITNWQDGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T+ ++G  AYG+LK E GVHRLVR+SPY++  +R TSF+S++V P+VDDSIEIEI+ 
Sbjct: 119 KTVTMQVEGNLAYGFLKSENGVHRLVRVSPYNAQGKRMTSFASVFVVPLVDDSIEIEINA 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAW 277
           +    DT+R+ GAGGQ+VN  ++ VR+ +            +V++  + R+Q+ N+  A 
Sbjct: 179 AGISWDTFRSGGAGGQNVNKVETGVRLHYKYKDPETGEDKEIVIENTESRTQYDNRENAM 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
            +LR++LYE+ELQ+R       E+ K +I WG QIRSYV    + VKD RTN + ++ + 
Sbjct: 239 RLLRSQLYEMELQRRRAAEAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSNVNA 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DGD+D+F+KA L 
Sbjct: 298 VMDGDIDEFIKAYLM 312


>gi|222087303|ref|YP_002545840.1| peptide chain release factor 1 [Agrobacterium radiobacter K84]
 gi|254790855|sp|B9JB75|RF1_AGRRK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|221724751|gb|ACM27907.1| peptide chain release factor 1 [Agrobacterium radiobacter K84]
          Length = 359

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 174/344 (50%), Gaps = 18/344 (5%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   +  +    P           L  E   L   ++ I++ +  + +   L  + 
Sbjct: 11  ELERRFGEIEARMSAGPA----ADVYVKLASEYSELQPVVAKIRDYEKAIAEASDLEAML 66

Query: 77  LEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            ++     +++ +D       E      +  Q   L    AD   A LE+ AG GG+E+ 
Sbjct: 67  ADKSVDREMRDLADMELPEVKERIEVLEQDIQILLLPKDAADEKSAILEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L RMY R+A    +K E L   DGE  G K     I G   +  LK E GVHR+ 
Sbjct: 127 LFGGDLFRMYERFAANNGWKVEILSASDGEAGGYKEVIATITGKGVFSRLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + I+IEI   D RIDT R+SGAGGQHVNTTDSAVR
Sbjct: 187 RVPETEAGGRIHTSAATVAVLP-EAEEIDIEIRAEDIRIDTMRSSGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+P+G+VV    E+SQH+N+A+A  +LR++L+++E Q+    +      K+++G G  
Sbjct: 246 ITHLPSGIVVTSS-EKSQHQNRAKAMQVLRSRLFDMERQR--ADSERSADRKSQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       +++G++D+ + A  A
Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIDEVVDALRA 345


>gi|227501694|ref|ZP_03931743.1| peptide chain release factor 1 [Corynebacterium accolens ATCC
           49725]
 gi|227077719|gb|EEI15682.1| peptide chain release factor 1 [Corynebacterium accolens ATCC
           49725]
          Length = 352

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 176/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V     +  +  DP +  +    + L +    L   I   +E+     D     E+
Sbjct: 2   VDDIVSEYQGIEMQMGDPEIAGDQQAFRKLSKRYAELRPIIKVNEELTQAREDLADAKEM 61

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D    +E       ++   E          E DS D  +E+ AGAGG E+  +A 
Sbjct: 62  --AYEDHDFQEEADRLAASVEELEEKLADLLAPRDEQDSEDIIMEIKAGAGGEEAALFAG 119

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190
            L RMY R+A+K  FK E L +++ +  G+K  T+  +        A+   K E GVHR+
Sbjct: 120 DLARMYERFADKIDFKWEVLGLNESDLGGVKDMTISFRAKSPTRDGAWSVFKFEGGVHRV 179

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R  TS + + VYP  ++   + I + D R+D YR+SG GGQ VNTTDSAV
Sbjct: 180 QRVPVTESQGRIQTSAAGVLVYPEPEEVESVNIDDKDIRVDVYRSSGKGGQGVNTTDSAV 239

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG++V CQ+ERSQ +NKA+A  +L+A+L ++E + RE  A    +S+   +   
Sbjct: 240 RITHLPTGLIVTCQKERSQIQNKARALQVLQARLDQMEREAREAEAGEQRASQVRTMDRS 299

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            ++R+Y   P   + D R   +  +   VL+GD+ D +KA    ++
Sbjct: 300 ERVRTYNW-PENRITDHRIGYKANNLDSVLNGDMQDLIKALQDQER 344


>gi|283768251|ref|ZP_06341164.1| peptide chain release factor 1 [Bulleidia extructa W1219]
 gi|283105128|gb|EFC06499.1| peptide chain release factor 1 [Bulleidia extructa W1219]
          Length = 358

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 110/338 (32%), Positives = 169/338 (50%), Gaps = 10/338 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           QR   +     D  ++ N      L +E+  L  A+    +++          E+  E D
Sbjct: 13  QRYQTITNDLMDEKVFSNPALLTKLSKEQASLTQAVEAWHKLKALDERIEQANEMMKESD 72

Query: 81  ---DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
                    E  + L   +  +E+ Q   +     D +D  +E+  GAGG E   +A  L
Sbjct: 73  VELKEIAKMELEECLPVQEELLEHIQHLLIPKDPDDDHDVIMEIRGGAGGDEGNIFAGDL 132

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMYTR+AE + +K + +E    E  G       IKG   Y  LK E GVHR+ R+   +
Sbjct: 133 YRMYTRYAESKGWKVQVMETSISEAGGFSQVIFSIKGNEVYRDLKWESGVHRVQRVPKTE 192

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  R HTS +++   P  +++    I  +D  I+T+RASGAGGQH+N TDSAVRI H+PT
Sbjct: 193 SQGRVHTSTATVLCQPEAEEADIE-IDPADLTIETHRASGAGGQHINKTDSAVRIVHVPT 251

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314
           G+ V CQ+ RSQ +N+  A  ++RA++YE   ++R+E A  G + + +IG G    +IR+
Sbjct: 252 GITVNCQEGRSQIENRETAMRLIRARVYEEIKRQRDEEA--GAARRAKIGTGDRSEKIRT 309

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           Y   P   V D R  +  T    +++G LD  +    A
Sbjct: 310 YNY-PQNRVTDHRIGLTITQLDRIMEGKLDGIIAGLQA 346


>gi|308235424|ref|ZP_07666161.1| peptide chain release factor 1 [Gardnerella vaginalis ATCC 14018]
 gi|311114831|ref|YP_003986052.1| peptide chain release factor RF1 [Gardnerella vaginalis ATCC 14019]
 gi|310946325|gb|ADP39029.1| peptide chain release factor RF1 [Gardnerella vaginalis ATCC 14019]
          Length = 365

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 166/345 (48%), Gaps = 16/345 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
                +  +  +P +  N    + L R    L + +S     +    D  +  E+A E++
Sbjct: 17  NEYRDIENRMGEPEVASNPDAIRKLGRRHAELGSIVSAYLNYKQLCEDYEVANEMASEDE 76

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D +   +  +       E        +     D+ D  +E+ AG GG E+  +A  LLRM
Sbjct: 77  DLAKEAKQLEEQIPAAKEKLRTAL--IPRDPDDARDMIMEIKAGTGGEEAALFAGDLLRM 134

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193
           Y R+AEKR + T     +  E  G+K   L I            +  +K E GVHR+ RI
Sbjct: 135 YMRYAEKRGWTTVIQSENSTELGGVKDVQLAIRAKGTPAPEDGVWASMKYEGGVHRVQRI 194

Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
              +S  R  TS + + V+P   +D  EIEI   D +ID + +SG GGQ VNTT SAVR+
Sbjct: 195 PVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRM 254

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309
           THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++  +E A   +   +++      
Sbjct: 255 THIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLDRS 312

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +IR+Y   P   + D RTN +  +   VL+GDL   + + +   
Sbjct: 313 ERIRTYNF-PENRIVDHRTNYKAYNLDQVLNGDLQPVIDSDIQAD 356


>gi|17231677|ref|NP_488225.1| peptide chain release factor 1 [Nostoc sp. PCC 7120]
 gi|20139331|sp|Q8YPK9|RF1_ANASP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|17133320|dbj|BAB75884.1| translation releasing factor RF-1 [Nostoc sp. PCC 7120]
          Length = 366

 Score =  202 bits (513), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 100/348 (28%), Positives = 177/348 (50%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q  + L  +  DP   +N  E + + + R  L+  +      +    + +   ++
Sbjct: 10  LKSVEQTFNELTRRLGDPDTAKNPDEYQKIAKSRSSLEEVVETYDNWKIAQEELIGARQV 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130
             E +    + E +    +   E         +   L     D  +  LE+ AG GG E+
Sbjct: 70  LKEANSDPDMHEMAALEVKELEEKIDYLETRLKVLLLPRDPNDDKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  LLRMY+R+A+ + ++ + +    GE  G K   L I+G + Y  LK E GVHR+
Sbjct: 130 SIWAGDLLRMYSRYADTQGWRVKLVSESLGEMGGFKEVILEIQGESVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P   D +EI I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATEAGGRVHTSTATVAIMP-EVDEVEIHIDPKDIEMTTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +NK +A  +LRAKLYE++L++++E   +    ++++G G 
Sbjct: 249 DLMHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQQEE--VTSMRRSQVGTGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R   +  S + VL+GDL+  +++ ++  +
Sbjct: 307 RSEKIRTYNYKD-SRATDHRLG-QNFSLNPVLEGDLETVIQSCISQDQ 352


>gi|317125570|ref|YP_004099682.1| bacterial peptide chain release factor 1 (bRF-1) [Intrasporangium
           calvum DSM 43043]
 gi|315589658|gb|ADU48955.1| bacterial peptide chain release factor 1 (bRF-1) [Intrasporangium
           calvum DSM 43043]
          Length = 359

 Score =  202 bits (513), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 110/352 (31%), Positives = 170/352 (48%), Gaps = 14/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + +     +   + L  +  DP +  +    + L +    L   ++  +  Q    D   
Sbjct: 1   MLESVQAILDEYADLEARLADPAVHADQDLVRTLNKRYAALGPTVASARAWQTARDDVEA 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EL  E+   +      + +     E   +Q         D  D  LEV AG GG ES 
Sbjct: 61  ARELGAEDAAFAAEVPALEGVLAETEEHLLRQLVP--RDPDDDRDVILEVKAGEGGEESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG--------PNAYGWLKG 183
            +A  LLRMY R+AE+R ++T   +  + +  G K   + I+            +  LK 
Sbjct: 119 LFAGDLLRMYLRYAERRGWRTVVEDATESDLGGYKDVRVSIRSRGHQPGPGEAPWARLKY 178

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHR+ R+   +S  R HTS + + V P   + +E+ I   D RID YR+SG GGQ V
Sbjct: 179 EGGVHRVQRVPVTESQGRVHTSAAGVLVMP-EAEEVEVTIDPHDLRIDVYRSSGPGGQSV 237

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVRITH+PTG+VV CQ E+SQ +NK  A  +LRA+L++L   + +  A+    S+
Sbjct: 238 NTTDSAVRITHLPTGLVVSCQNEKSQLQNKEAALRVLRARLHQLAKDEADAEASAARRSQ 297

Query: 304 TE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +    +IR+Y   P   + D RT  +  +   V+DGDLD  +++ +   
Sbjct: 298 VRTVDRSERIRTYNF-PENRISDHRTGYKSYNLDHVIDGDLDPVVQSAIDAD 348


>gi|168036672|ref|XP_001770830.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677889|gb|EDQ64354.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 376

 Score =  202 bits (513), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 104/348 (29%), Positives = 187/348 (53%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
            D+A +    L+ +  DP +  N  E + + +    L+      +  ++   +L D   +
Sbjct: 18  LDSAERTYKELSMRLADPDVANNNNEYQKIAKSLAELEEIYQTYQRFKECEAQLDDAKEM 77

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD--SNDAYLEVHAGAGGTES 130
            + A  + + + +     N+   ++E   +Q + +L       S +  LEV AG GG E+
Sbjct: 78  AKDAAGDREMAEMAAEEANILAQQVEELEEQLKVMLLPSDPLDSRNIMLEVRAGTGGDEA 137

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY +++E+  ++   +   + E+ G K   L I G   Y  LK E GVHR+
Sbjct: 138 GIWAGDLVRMYQKFSERNNWRCSPVSCTEAEKGGYKEFVLEITGERVYSKLKYESGVHRV 197

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ + P   D +E+ I   D  + T R+ GAGGQ+VN  ++A+
Sbjct: 198 QRVPATESQGRVHTSTATVAIMP-EVDEVEVVIDPKDIELTTARSGGAGGQNVNKVETAI 256

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ KNK +A+ +LRAKLYE++L++++E   I  + ++++G G 
Sbjct: 257 DLFHKPTGIRIFCTEERSQLKNKIRAFQLLRAKLYEIKLREQQET--IRNARQSQVGTGA 314

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D RT I     + VL+G+L+  +++  A+++
Sbjct: 315 RSEKIRTYNYKD-NRVSDHRTKI-NFDLTTVLNGELEGPVQSCAALEQ 360


>gi|189218443|ref|YP_001939084.1| protein chain release factor A [Methylacidiphilum infernorum V4]
 gi|189185301|gb|ACD82486.1| Protein chain release factor A [Methylacidiphilum infernorum V4]
          Length = 377

 Score =  202 bits (513), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 105/347 (30%), Positives = 173/347 (49%), Gaps = 12/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   ++   L T+     L+ +  +   + +E   L   +    E++        +  L
Sbjct: 7   IEKIQKKFDKLQTELSKEELYTDPSKTIEIAKEHTRLKETLDLYGELKQIENAKSSVESL 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQF-----ESLLSGEADSNDAYLEVHAGAGGTES 130
           A E  D  I +     + R+  +++                  S +  +E+ AG GG E+
Sbjct: 67  AKETVDPEIQELAQQEITRLSNKIQELTMAILGSLFPPEENKSSKNVIIEIRAGTGGEEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY+++AEK+ +K E L  +  E  G+K     ++G  A+  +K E GVHR+
Sbjct: 127 ALFAADLYRMYSKYAEKKGWKQELLHFNPSELGGLKEVIFTVQGKEAFRKMKFESGVHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V     + +E++I   D RI+  RASG GGQ VNTTDSAV
Sbjct: 187 QRVPATESQGRIHTSTATVAVLL-ETEEVELDIKAEDLRIEVCRASGPGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           ++ HIP+G++V+CQ ERSQ KNK +A  +L+A+L  L  ++ EE     +  K+ IG G 
Sbjct: 246 QVFHIPSGIMVRCQDERSQIKNKEKALKILKARL--LARKQEEEAQKRAQERKSMIGSGE 303

Query: 311 Q---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +   IR+Y   P   V D R  I   +    +DGD+D  +   +  +
Sbjct: 304 RTEKIRTYNF-PQGRVTDHRIPITLYNLQSFMDGDIDPIVDQLMQKE 349


>gi|110680314|ref|YP_683321.1| peptide chain release factor 1 [Roseobacter denitrificans OCh 114]
 gi|119361597|sp|Q164F8|RF1_ROSDO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|109456430|gb|ABG32635.1| peptide chain release factor 1 [Roseobacter denitrificans OCh 114]
          Length = 351

 Score =  202 bits (513), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 115/315 (36%), Positives = 168/315 (53%), Gaps = 9/315 (2%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK-LEVEYKQ 103
           L +E   L   +  I   Q  L D     E+  + D   + +E    L+          Q
Sbjct: 33  LAKEYSDLRPVVEQISAYQQLLSDLEDAAEMLGDPDMAPLAEEEIPRLKSALPQAEAALQ 92

Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
              L   +AD+  A LE+  G GG E+  +A  L RMY R+AE + +K + +E+ + E  
Sbjct: 93  LALLPKDKADAKPAMLEIRPGTGGDEAALFAGDLFRMYQRYAETQGWKVDLIELQETELG 152

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           GIK     IKG + +  LK E GVHR+ R+   +S  R HTS +++ V P   + ++I I
Sbjct: 153 GIKEVVAHIKGADVFARLKYESGVHRVQRVPSTESGGRIHTSAATVAVLP-EAEDVDIHI 211

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
             +D RIDT R+SGAGGQHVNTTDSAVRITH+PTG+VV    E+SQH+N+  A  +L+A+
Sbjct: 212 DANDLRIDTMRSSGAGGQHVNTTDSAVRITHLPTGLVVTSS-EKSQHRNREIAMQVLKAR 270

Query: 284 LYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           LY+LE  + ++          ++G G    +IR+Y   P   + D R N+       VL 
Sbjct: 271 LYDLERSRVDDER--SADRAAQVGSGDRSERIRTYNF-PQGRMTDHRINLTLYRLDAVLQ 327

Query: 341 GDLDDFMKATLAIKK 355
           GDLD+ + A  A  +
Sbjct: 328 GDLDEIIDALTAHAQ 342


>gi|284992528|ref|YP_003411082.1| peptide chain release factor 1 [Geodermatophilus obscurus DSM
           43160]
 gi|284065773|gb|ADB76711.1| peptide chain release factor 1 [Geodermatophilus obscurus DSM
           43160]
          Length = 363

 Score =  202 bits (513), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 105/342 (30%), Positives = 160/342 (46%), Gaps = 8/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               +   + L T+  DP +  +   A+ L R    L   +   + +     D     EL
Sbjct: 16  LSGLLAEHAALETELADPAVHADASRARRLGRRYAQLAPLVETKRALDAVRDDLAAAREL 75

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E+   +      +       E        +     D  D  LE+ AG GG ES  +A 
Sbjct: 76  ADEDASFAAEAAALEQRVPELEERLRSLL--VPEDPDDDKDVILEIKAGEGGAESALFAG 133

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK---GPNAYGWLKGEQGVHRLVR 192
            LLRMY R+AE+R + TE L+    +  G K   + +K       +  LK E GVHR+ R
Sbjct: 134 DLLRMYLRYAERRGWATEVLDAVPADLGGYKDVAIAVKSRSDEGIWSRLKFEGGVHRVQR 193

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS   + V P   + +++ +  +D RID +R+SG GGQ VNTTDSAVRI
Sbjct: 194 VPVTESQGRIHTSAVGVLVLP-EAEEVDVTVDPNDLRIDVFRSSGPGGQSVNTTDSAVRI 252

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311
           TH+PTG+VV  Q E+SQ +N+  A  +LR++L      +    A+    S+   +    +
Sbjct: 253 THLPTGIVVSSQNEKSQLQNRESALRVLRSRLLAAARDEAAAAASDQRRSQVRTVDRSER 312

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +R+Y   P   + D R   +  +   VLDG+LD  + A    
Sbjct: 313 VRTYNF-PESRISDHRVGFKAHNLDQVLDGELDPVIDALTRA 353


>gi|78188007|ref|YP_378345.1| peptide chain release factor 2 [Chlorobium chlorochromatii CaD3]
 gi|78170206|gb|ABB27302.1| bacterial peptide chain release factor 2 (bRF-2) [Chlorobium
           chlorochromatii CaD3]
          Length = 312

 Score =  202 bits (513), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 138/308 (44%), Positives = 204/308 (66%), Gaps = 1/308 (0%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           ++E   L +      ++  +       +++ALE  D S   E ++ +  ++  +   +F 
Sbjct: 2   LKELADLKSWTDEYDKLSAKARYCQDEMDIALELQDESFGDELTNTITELEQAIAAIEFR 61

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++LSG+ D+ +A + +HAGAGGTE+QDWA ML RMY RWAE++ FKT   +  +G+ AGI
Sbjct: 62  NMLSGKDDAGNAMVTIHAGAGGTEAQDWAEMLYRMYMRWAERKGFKTFTDDYQEGDGAGI 121

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ATL I+G  AYG+LK E GVHRLVR+SP+D+N+RRHTSF+S++ YP     +EIE+ +
Sbjct: 122 KTATLEIQGAYAYGYLKAENGVHRLVRVSPFDANARRHTSFASVYTYPEAPPDVEIEVRK 181

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D  + T+R+ G GGQ+VN  ++AVRI H+PTG+VV CQ+ERSQ +N+ +A  ML A+LY
Sbjct: 182 EDLELSTFRSGGKGGQNVNKVETAVRIKHLPTGIVVGCQEERSQLQNRERAMKMLMAQLY 241

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           + + ++ +      E  K +I WG QIRSYVL   + +KD RTN E+     VLDGDLDD
Sbjct: 242 QRQREEEDAKKREIEGKKKKIEWGSQIRSYVLDD-RRIKDHRTNYERFDIETVLDGDLDD 300

Query: 346 FMKATLAI 353
           FM+  L+ 
Sbjct: 301 FMEKYLSQ 308


>gi|254412235|ref|ZP_05026010.1| peptide chain release factor 1 [Microcoleus chthonoplastes PCC
           7420]
 gi|196181201|gb|EDX76190.1| peptide chain release factor 1 [Microcoleus chthonoplastes PCC
           7420]
          Length = 371

 Score =  202 bits (513), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 180/348 (51%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q    L  +  DP +  + +E + + + R  L+  +   +  +    +     ++
Sbjct: 10  LQSVEQTFHELTRRLADPDIATDPVEVQRVAKARSSLEEVVITYELWKTAQEELTGARQI 69

Query: 76  ALEEDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E +    + E       +   +++   +  +   L     D  +  LE+ AG GG E+
Sbjct: 70  LKEANGDGEMHEMASLEVEELQTKLEELEKRLKILLLPRDPNDDKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY+R+AE + ++ + L     +  G K A L I+G   Y  LK E GVHR+
Sbjct: 130 SIWAGDLVRMYSRYAETQNWRVKLLSESPADMGGFKEAILEIQGEQVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   D +EIE+   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPVTEAGGRVHTSTATVAVMP-EVDDVEIEVDPKDLEVSTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +N+ +A  +LRAKLYE++L++++E   +    ++++G G 
Sbjct: 249 DLFHKPTGIRIFCTEERSQLQNRERALQILRAKLYEMKLREQQE--AVTSMRRSQVGTGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R + +  S + +L+GD++  ++A +   +
Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLS-QNYSLNSLLEGDIESVIQACITQDQ 352


>gi|157828568|ref|YP_001494810.1| peptide chain release factor 1 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165933282|ref|YP_001650071.1| peptide chain release factor 1 [Rickettsia rickettsii str. Iowa]
 gi|166223598|sp|A8GSC7|RF1_RICRS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039987|sp|B0BXT9|RF1_RICRO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157801049|gb|ABV76302.1| peptide chain release factor 1 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908369|gb|ABY72665.1| bacterial peptide chain release factor 1 (RF-1) [Rickettsia
           rickettsii str. Iowa]
          Length = 355

 Score =  202 bits (513), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 124/347 (35%), Positives = 187/347 (53%), Gaps = 16/347 (4%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           +    + +   L  K     +  +  E     +E   L++ ++ IKE      +      
Sbjct: 6   NLAKILDKYENLGNKLSS-GIMGD--EFVKASKEYAELEDVVAKIKEYNKAKSELEEANN 62

Query: 75  LALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LE    +   E  ++                +   L   +ADS  A +EV AG+GG E
Sbjct: 63  FKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGGEE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A +L  MY R+AE + ++ E L I D    G K A+  IKG + +  LK E GVHR
Sbjct: 123 AALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P   + ++I+I + D RIDTYRASGAGGQHVNTTDSA
Sbjct: 183 VQRVPETESQGRIHTSAATVAVLP-EAEEVDIKIEDKDLRIDTYRASGAGGQHVNTTDSA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG+ V  Q E+SQHKNKA+A  +LRA++YE E +K+E+     +S + ++G G
Sbjct: 242 VRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQAR--ADSRRGQVGSG 299

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
               +IR+Y   P   V D R ++      +V+ +G LD+F++A +A
Sbjct: 300 DRSERIRTYNF-PQGRVSDHRIHLTLYKIDEVVKNGQLDEFVEALIA 345


>gi|183602493|ref|ZP_02963858.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219683536|ref|YP_002469919.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|241190567|ref|YP_002967961.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|241195973|ref|YP_002969528.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|254790862|sp|B8DTL4|RF1_BIFA0 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|183218134|gb|EDT88780.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|219621186|gb|ACL29343.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|240248959|gb|ACS45899.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|240250527|gb|ACS47466.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|295793554|gb|ADG33089.1| peptide chain release factor 1 [Bifidobacterium animalis subsp.
           lactis V9]
          Length = 365

 Score =  202 bits (513), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 166/345 (48%), Gaps = 16/345 (4%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +    +  +  +  +W N  + + L R +  L   ++  +   +   D     E+    +
Sbjct: 14  EEYENIERQMGEQEVWSNPDKMRKLGRRQAQLGTIVNAYRTWLNIRNDLDAAQEM--AGE 71

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
           D    QE       +    E  +   +     D+ D  +E+ AGAGG E+  +A  LLRM
Sbjct: 72  DPDFAQEAKRLESELPEAEEKLRTALIPRDPDDARDVIMEIKAGAGGEEAALFAGDLLRM 131

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRI 193
           Y R+AEKR +       +  E  G+K   + I            +  LK E GVHR+ RI
Sbjct: 132 YMRYAEKRGWGVTIQSENSTELGGVKDVQMAIRAKGNPSPEEGVWASLKYEGGVHRVQRI 191

Query: 194 SPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
              +S  R  TS + + V+P   +D  EIEI   D +ID + +SG GGQ VNTT SAVR+
Sbjct: 192 PVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQSVNTTYSAVRM 251

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309
           THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++  +E A   +   +++      
Sbjct: 252 THIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLDRS 309

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +IR+Y   P   + D RTN +  +   VLDGDL   + + +   
Sbjct: 310 ERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 353


>gi|167644945|ref|YP_001682608.1| peptide chain release factor 1 [Caulobacter sp. K31]
 gi|167347375|gb|ABZ70110.1| peptide chain release factor 1 [Caulobacter sp. K31]
          Length = 334

 Score =  202 bits (513), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 111/323 (34%), Positives = 173/323 (53%), Gaps = 10/323 (3%)

Query: 38  NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKL 97
           +  E   L +E   L      ++ +     +   L E+  + +  +++ +    L     
Sbjct: 6   DGAEIVKLSKEHAELRPVAEAVQALAKLAAERADLEEMTADPEMAAMVSDEIQALDEKLP 65

Query: 98  -EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
                         + ++  A LEV AG GG E+  +A  L RMY R+A+ + +K E   
Sbjct: 66  VMERELALMLAPRDKDENASAILEVRAGTGGDEAALFAGDLFRMYQRYAQLQGWKVEVDS 125

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
           + +GE  G K     + G   +G  K E GVHR+ R+   ++  R HTS +++ V P   
Sbjct: 126 VSEGEMGGYKEIIASVTGDGVFGRWKFESGVHRVQRVPATEAQGRIHTSAATVAVLP-EA 184

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + +EIEI+++D RIDTYR+SGAGGQHVN TDSAVRITH+PTGVVV    E+SQH+N+A+A
Sbjct: 185 EDVEIEINDADIRIDTYRSSGAGGQHVNKTDSAVRITHLPTGVVVTSS-EKSQHQNRARA 243

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
              L+A+LY+L  Q+        ++ K+++G G    +IR+Y   P   V D R N+   
Sbjct: 244 MKNLKARLYDL--QRTALDTARSDARKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTVY 300

Query: 334 SPSDVLDGD-LDDFMKATLAIKK 355
           +   V++GD LDD +K  +A  +
Sbjct: 301 NLPKVMEGDALDDIIKPLIAEDQ 323


>gi|317486373|ref|ZP_07945201.1| peptide chain release factor 2 [Bilophila wadsworthia 3_1_6]
 gi|316922362|gb|EFV43620.1| peptide chain release factor 2 [Bilophila wadsworthia 3_1_6]
          Length = 329

 Score =  202 bits (513), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 152/319 (47%), Positives = 198/319 (62%), Gaps = 10/319 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLEL----------ALEEDDCSILQETSDNLQRI 95
           +RE+  L+  +  +  +++     L   E+              D    L+  S  ++R+
Sbjct: 2   LREKSRLEAELDRLDTLKNCHASMLDWQEMAQELSGGAEIKEGGDAAEALESLSAEIERL 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
              +E  +   LLS E D  DA LE+H GAGGTE+QDWA ML RMY RWA+   F  E L
Sbjct: 62  TELLEETETNLLLSSEEDHADAILEIHPGAGGTEAQDWAQMLQRMYLRWADSHGFSVEEL 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           +   G+EAGIKS +L I G N YG+LKGE+G+HRL+RISP+DS+ RRHTSF+S+ V P  
Sbjct: 122 DFLPGDEAGIKSVSLRISGENVYGFLKGERGIHRLIRISPFDSSGRRHTSFASVDVIPDA 181

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
            D IEIEI ESD R+D + ASG GGQ VNTT SAVRITHIP+G+ VQCQ ERSQH NK  
Sbjct: 182 GDDIEIEIKESDLRVDIFCASGPGGQGVNTTYSAVRITHIPSGISVQCQNERSQHHNKDS 241

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A  +LR +LY+LEL KR+       + K  I +G QIR+Y LQPY++VKD R N E    
Sbjct: 242 AMRILRGRLYDLELSKRDAARQAEYAGKNAISFGSQIRTYTLQPYRLVKDHRNNCEIGDT 301

Query: 336 SDVLDGDLDDFMKATLAIK 354
             VLDG +D  ++  L  +
Sbjct: 302 DAVLDGRIDKLLRDYLLWQ 320


>gi|269219853|ref|ZP_06163707.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 848 str.
           F0332]
 gi|269210758|gb|EEZ77098.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 848 str.
           F0332]
          Length = 365

 Score =  202 bits (513), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 108/349 (30%), Positives = 166/349 (47%), Gaps = 12/349 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +  +     + T+   P    +  + K L R    L   +   +  +    D     E+ 
Sbjct: 9   EQVLAEHRKIETEMSSPEALSSPEKMKSLGRRYAELGRVVRVYQAYRRAEADLSETREIV 68

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTESQDWA 134
               + + L        +          +  L         DA +EV AG GG ES  +A
Sbjct: 69  EAGGEDAELFRPELPGLQEAYAQAEAALKDALIPRDPDDARDAIVEVKAGEGGEESALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI--------KGPNAYGWLKGEQG 186
             LLRMY R+AE+  ++T+ L     E  G K   L +             +  LK E G
Sbjct: 129 GDLLRMYERYAERMGWQTQILSSVPTELGGFKDVQLAVRLRSAPEDPADGVWAHLKFEAG 188

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS + + V+  VDD  E+EI+++D R+D +R+SG GGQ VNTT
Sbjct: 189 VHRVQRVPVTESQGRLHTSAAGVLVFAEVDDPGEVEIADADIRVDVFRSSGPGGQSVNTT 248

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE- 305
           DSAVRITHIPTG+VV CQ E+SQ KN+  A  +LRA+L +++L+++ E       S+   
Sbjct: 249 DSAVRITHIPTGLVVSCQDEKSQIKNREAAMRVLRARLRQMQLEQQAEENAAMRRSQVRT 308

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +    +IR+Y   P   + D RT  +  +   VL G+L   + +   + 
Sbjct: 309 VDRSERIRTYNF-PENRISDHRTGYKAYNLDQVLAGNLGPLVDSAREMD 356


>gi|260577564|ref|ZP_05845503.1| peptide chain release factor 1 [Corynebacterium jeikeium ATCC
           43734]
 gi|258604288|gb|EEW17526.1| peptide chain release factor 1 [Corynebacterium jeikeium ATCC
           43734]
          Length = 358

 Score =  201 bits (512), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 177/346 (51%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +     L  +  DP L  +   A+ + +    L   I   ++++    D+    E+
Sbjct: 8   IDDILAEYQGLEMQLSDPELHNDPAAARKVGKRFSELQPIIQTHQKLEQAREDHEAASEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E+ + +   +  +       E              D +D  +E+ +GAGG E+  +A 
Sbjct: 68  AAEDKEFAEEAKRLEEEIGELEEQLTDLL--APRDPHDGDDIVMEIKSGAGGEEAALFAG 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-----YGWLKGEQGVHRL 190
            L RMY R+AE+  F TE L +++ +  G+K  TL I+         +   K E GVHR+
Sbjct: 126 ELARMYQRYAERHGFSTEILGLNETDLGGVKDMTLSIRSKQPSRDGAWSEFKFEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            RI   +S  R  TS + + VYP  D+  ++ I + D R+D YR+SG GGQ VNTTDSAV
Sbjct: 186 QRIPVTESQGRIQTSAAGVLVYPEPDEVEDVHIDDKDIRVDVYRSSGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PT +VV CQ+ERSQ +N+A+A  +L A+L +L+ ++ E  A  G +++   +   
Sbjct: 246 RITHLPTNIVVTCQKERSQIQNRARAMQVLAARLQQLKEEEAEAEAAEGRAAQIRTMDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R   +  +   VLDGDL+  + A     +
Sbjct: 306 ERIRTYNF-PESRVSDHRIGYKANNLDSVLDGDLEALLAALKEADR 350


>gi|72382938|ref|YP_292293.1| peptide chain release factor 1 [Prochlorococcus marinus str.
           NATL2A]
 gi|119361577|sp|Q46IT8|RF1_PROMT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|72002788|gb|AAZ58590.1| bacterial peptide chain release factor 1 (bRF-1) [Prochlorococcus
           marinus str. NATL2A]
          Length = 365

 Score =  201 bits (512), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 102/348 (29%), Positives = 170/348 (48%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + A      L  +  DP +  +  + + + RER  L+  ++   ++Q    + L    L
Sbjct: 10  LETAKSSFQNLELQLADPDVASDPKQLETIARERSRLEPLVNDYLKLQIIEKECLEAKGL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130
             E  D   ++  +    +     + +  + L          D     LE+ AGAGG E+
Sbjct: 70  VKESRDDKEMELLAREELQNLELSKNELIQKLTLALLPKDPRDERSVMLEIRAGAGGNEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+ +K  +  + +   + +  G +   + +KG + Y  LK E GVHR+
Sbjct: 130 CLWAGDLARMYERYGQKLGWNVKPISSTEADMGGFREMIISVKGESVYSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +E++I  +D  I T R+ GAGGQ+VN  ++A+
Sbjct: 190 QRVPSTESQGRVHTSTATVAVMP-EADPVEVKIESTDLEISTARSGGAGGQNVNKVETAI 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H P+G+ V C QERSQ +N+ +A  +LRAKL ELEL   E  A    +  +++G G 
Sbjct: 249 DLFHKPSGIRVFCTQERSQMQNRERAMEILRAKLLELELA--EANAKERSARLSQVGTGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R  +       VL G L+D + A +A ++
Sbjct: 307 RSEKIRTYNYKD-NRTTDHRLGVNFP-LEQVLSGQLEDVIGACIAEEQ 352


>gi|32475815|ref|NP_868809.1| peptide chain release factor 1 [Rhodopirellula baltica SH 1]
 gi|81659907|sp|Q7ULT3|RF1_RHOBA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|32446358|emb|CAD76186.1| peptide chain release factor 1 [Rhodopirellula baltica SH 1]
 gi|327538345|gb|EGF25018.1| peptide chain release factor 1 [Rhodopirellula baltica WH47]
          Length = 360

 Score =  201 bits (512), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 107/347 (30%), Positives = 172/347 (49%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  + R   L     DP +  +        RE   L+   +  +  +    +    + +
Sbjct: 9   LEEKLARFEKLENDMSDPEVLSDGARMSATAREHGGLNRLANQYRTFKRLTDEIHQCVAM 68

Query: 76  ALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSND---AYLEVHAGAGGTESQ 131
             + +D    +     ++   K      +    L+   + +      +E+ AG GG E+ 
Sbjct: 69  VADAEDVDEREMAESEMESLRKERETVWEDLLSLTVGGEDSHRTRCVMEIRAGTGGDEAA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MYTR+AEK  +KTE ++    E  G K  TL ++G N +  L+ E G HR+ 
Sbjct: 129 LFARDLFEMYTRYAEKVGWKTELMDASPTEMGGFKDVTLTLEGDNVFRDLQYESGGHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + +EI++   D R D + ASG GGQHVN TDSAVR
Sbjct: 189 RVPETETQGRVHTSAATVAVMP-EPEDVEIDLKPDDYRKDFFGASGPGGQHVNKTDSAVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +TH  TG+VVQCQ E+SQHKN A+A  +L+A++Y  E ++ EE A   E+ K  IG G +
Sbjct: 248 LTHHETGIVVQCQDEKSQHKNLAKALRVLKARIY--EKKREEEAAKQAEARKGLIGSGDR 305

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              IR+Y   P   + D R N+       ++ GDL+   +A +   +
Sbjct: 306 SQRIRTYNF-PQNRLTDHRINLTIYKLDQIIAGDLNPVTEALIEYDR 351


>gi|68536431|ref|YP_251136.1| peptide chain release factor 1 [Corynebacterium jeikeium K411]
 gi|119361528|sp|Q4JUI9|RF1_CORJK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|68264030|emb|CAI37518.1| peptide chain release factor RF-1 [Corynebacterium jeikeium K411]
          Length = 358

 Score =  201 bits (512), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 176/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +     L  +  DP L  +   A+ + +    L   I   ++++    D     E+
Sbjct: 8   IDDILAEYQGLEMQLSDPELHNDPAAARKVGKRFSELQPIIQTHQKLEQAREDQEAASEM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E+ + +   +  +       E              D +D  +E+ +GAGG E+  +A 
Sbjct: 68  ASEDKEFAEEAKRLEEEISELEEQLTDLL--APRDPHDGDDIVMEIKSGAGGEEAALFAG 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-----YGWLKGEQGVHRL 190
            L RMY R+AE+  F TE L +++ +  G+K  TL I+         +   K E GVHR+
Sbjct: 126 ELARMYQRYAERHGFSTEILGLNETDLGGVKDMTLSIRSKQPSRDGAWSEFKFEGGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            RI   +S  R  TS + + VYP  D+  ++ I + D R+D YR+SG GGQ VNTTDSAV
Sbjct: 186 QRIPVTESQGRIQTSAAGVLVYPEPDEVEDVHIDDKDIRVDVYRSSGKGGQGVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PT +VV CQ+ERSQ +N+A+A  +L A+L +L+ ++ E  A  G +++   +   
Sbjct: 246 RITHLPTNIVVTCQKERSQIQNRARAMQVLAARLQQLKEEEAEAEAAEGRAAQIRTMDRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R   +  +   VLDGDL+  + A     +
Sbjct: 306 ERIRTYNF-PESRVSDHRIGYKANNLDSVLDGDLEALLAALKEADR 350


>gi|209551100|ref|YP_002283017.1| peptide chain release factor 1 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|238054472|sp|B5ZRR4|RF1_RHILW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|209536856|gb|ACI56791.1| peptide chain release factor 1 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 359

 Score =  201 bits (512), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 109/344 (31%), Positives = 179/344 (52%), Gaps = 18/344 (5%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   +  +    P           L  E   L   ++ I+  +  + +   L  L 
Sbjct: 11  ELERRFGEIEARMSAGPA----ADVYVKLASEYSELQPVVTKIRAYEKAIAELADLETLL 66

Query: 77  LEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            ++     +++ ++       ++I+   +  Q   L    AD   A LE+ AG GG+E+ 
Sbjct: 67  EDKSVDREMRDLAELELPEVKEQIEALEQEMQILLLPKDAADEKSAILEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R++ ++ +K E L   +GE  G K     I G   +  LK E GVHR+ 
Sbjct: 127 LFAGDLFRMYERFSAEKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + I+IEI   D RIDT R+SGAGGQHVNTTDSAVR
Sbjct: 187 RVPETEAGGRIHTSAATVAVLP-EAEEIDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+P+G+VV    E+SQH+N+A+A  +LR++LY+ E Q+    +      K+++G G  
Sbjct: 246 ITHLPSGIVVTSS-EKSQHQNRAKAMQVLRSRLYDAERQR--ADSERSADRKSQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   + D R N+       +++G++++ + A +A
Sbjct: 303 SERIRTYNF-PQGRITDHRINLTLYKLDRMMEGEIEEVVDALMA 345


>gi|288956982|ref|YP_003447323.1| peptide chain release factor RF-1 [Azospirillum sp. B510]
 gi|288909290|dbj|BAI70779.1| peptide chain release factor RF-1 [Azospirillum sp. B510]
          Length = 361

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 115/352 (32%), Positives = 172/352 (48%), Gaps = 19/352 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
           +D  + R   L              +   L +E   L    + I E++       D   +
Sbjct: 7   FDKVMARYDELRDTLAAG--LAESGDFARLSKEYADLTPIAAAIAELKRGRAEAADLAEM 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESL------LSGEADSNDAYLEVHAGAG 126
           +   + +        +    +   L     + E           EAD  +A LEV AG G
Sbjct: 65  IAAMMGDSGADPEMRSMAEEEFHLLTKRIPELERKVQISLLPKDEADEKNAILEVRAGTG 124

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L  MY R+A    ++ EA+++ +    G K AT  I G   +  LK E G
Sbjct: 125 GDEAALFAAELFEMYRRYAGLHGWRFEAMDVSETGIGGYKEATANITGRGVFAKLKFESG 184

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +++ V P   + ++I I E D RID +R+SG GGQ VNTT
Sbjct: 185 VHRVQRVPATEAQGRIHTSAATVAVLP-EAEEVDIHIDEKDLRIDVFRSSGPGGQSVNTT 243

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTG+VV  Q E+SQHKNKA+A  +LRA+LY+ E  +++  A      K ++
Sbjct: 244 DSAVRITHLPTGLVVSQQDEKSQHKNKAKALKVLRARLYDRERAEKD--AARAADRKNQV 301

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354
           G G    +IR+Y   P   V D R N+       V+ G+ LD+ + A +A  
Sbjct: 302 GSGDRSERIRTYNF-PQGRVTDHRINLTLYKIDKVMAGEALDELVDALVAED 352


>gi|154149107|ref|YP_001407141.1| peptide chain release factor 1 [Campylobacter hominis ATCC BAA-381]
 gi|166223542|sp|A7I3Q0|RF1_CAMHC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|153805116|gb|ABS52123.1| peptide chain release factor 1 [Campylobacter hominis ATCC BAA-381]
          Length = 355

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 113/340 (33%), Positives = 178/340 (52%), Gaps = 9/340 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +R   ++    DP +  ++     L +E++ ++   +   +  + L +      L  + +
Sbjct: 11  KRYDEISESLSDPKILSDISLVTKLSKEQRSIEPVRNATLQYLEVLKNIEDNKSLINDTE 70

Query: 81  DCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
              + +E   NL+  +    E  +   +     D  + +LE+ AG GG E+  +A  LL 
Sbjct: 71  LGDLAKEELKNLEISQNKLEEEIKILLIPKDPNDEKNIFLEIRAGTGGDEAALFAGDLLD 130

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
            Y R+AE R +KTE +   +G   G K   LL+KG  AY  LK E G HR+ R+   +S 
Sbjct: 131 AYLRYAELRGYKTEIVSQSEGSAGGFKEVILLVKGDGAYSRLKFEGGTHRVQRVPETESQ 190

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ + P ++DS    I+E+D RID  RASG GGQ VNTTDSAVRITHIPTG+
Sbjct: 191 GRVHTSAITVAIMPEIEDSEIQ-INENDLRIDVMRASGHGGQCVNTTDSAVRITHIPTGL 249

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYV 316
           VV  Q  +SQHKNK  A  +L+A+LY+L+ ++R+         K ++G G    +IR+Y 
Sbjct: 250 VVTNQDGKSQHKNKEAAMKVLKARLYDLQEKERKAKEQ--SERKDQVGTGDRSGRIRTYN 307

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLAIKK 355
             P   + D R N+       ++ G L D+ +   +A  +
Sbjct: 308 Y-PQNRITDHRINLTLYRLDAIMAGGLFDEIIDPLIAHAQ 346


>gi|302842492|ref|XP_002952789.1| hypothetical protein VOLCADRAFT_105686 [Volvox carteri f.
           nagariensis]
 gi|300261829|gb|EFJ46039.1| hypothetical protein VOLCADRAFT_105686 [Volvox carteri f.
           nagariensis]
          Length = 415

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 177/342 (51%), Gaps = 14/342 (4%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
              L  K  DP +  N  E + + +    L+  ++  +  +D         E    E   
Sbjct: 65  FKELQMKMADPEVAANSTEFQKVAKAAADLEETVNAYRTYKDTEKQLSDASEYLKNEAAD 124

Query: 83  SILQETSDNLQRIKLE------VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
                     +  +LE       +  + + +     D  +  LE+ AGAGG E+  WA  
Sbjct: 125 DPEMAEFARAEIAELEVSLAQLQDKLRLQLVPKDPLDDRNIMLEIRAGAGGDEASIWAGD 184

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           ++RMY R+A ++ +K   +    GE  G K   L I G + Y  LK E GVHR+ R+   
Sbjct: 185 MMRMYQRYANRQGWKASLVSCTQGESGGYKEVILEISGTSVYSKLKWEAGVHRVQRVPAT 244

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           ++  R HTS +++ V P   + ++++I+ S+  +   RASGAGGQ+VN  ++AV + H P
Sbjct: 245 EAAGRVHTSTATVAVMP-EVEDVDVQINPSEIEVKFARASGAGGQNVNKVETAVDLMHKP 303

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+ V CQ+ER+Q +NK +A+ +LRAKLYE+E+Q+++    I  + K+++G G    +I+
Sbjct: 304 TGIRVFCQEERTQAQNKERAFQILRAKLYEMEIQRQQAE--IYAARKSQVGTGDRSEKIK 361

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y  +    V D R   +    + VL+GDL+D ++A ++  +
Sbjct: 362 TYNYKD-SRVSDHRIK-QNFDLNSVLEGDLEDSLQAMISADQ 401


>gi|168705097|ref|ZP_02737374.1| peptide chain release factor 1 [Gemmata obscuriglobus UQM 2246]
          Length = 358

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 94/340 (27%), Positives = 157/340 (46%), Gaps = 10/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  + R + L  +  DP +  + ++A  + +ER  L   +    E +           +
Sbjct: 5   LEPQLARYAELEQQLYDPAIAGDPVKAGAIGKERGALAKIVEPYIEYKRLCRAIADAEVM 64

Query: 76  ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           A + D   +  E   +L+  +       + + LL    D +   +E+ AG GG E+  +A
Sbjct: 65  AADPDLKDMADEELADLRPKRDALHARIEEKLLLDPSEDFSKLIIEIRAGTGGDEAALFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L  MYTR+A ++ +K E +    GE  G K     + G + Y  L+ E G HR+ R+ 
Sbjct: 125 GNLYEMYTRYAREKGWKIEEIASSPGEAGGFKEVAFGVTGDDVYQLLRYESGGHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P  +++       +D   +  RA GAGGQHVN T+SAVRI +
Sbjct: 185 ATETQGRIHTSAATVAVLPEPEEAQVEINEANDIEWERMRAGGAGGQHVNKTESAVRIWY 244

Query: 255 I---PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR- 310
               P  + V+CQ  RSQ KN  QA  +LR++L+E + ++           K +IG G  
Sbjct: 245 KKGTPDEMEVKCQDGRSQGKNYEQAMRILRSRLFERQQERI--HRERASMRKEQIGSGDR 302

Query: 311 --QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
             +IR+Y   P     D R          ++ G LD  ++
Sbjct: 303 NARIRTYNF-PQNRCTDHRIEFTVYKLDAIMAGALDQMIQ 341


>gi|172038958|ref|YP_001805459.1| peptide chain release factor 1 [Cyanothece sp. ATCC 51142]
 gi|171700412|gb|ACB53393.1| peptide chain release factor 1 [Cyanothece sp. ATCC 51142]
          Length = 375

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 99/348 (28%), Positives = 179/348 (51%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q    L  +  DP +  N  E + + + R  L+  ++  K  Q+   +     ++
Sbjct: 16  LQSVEQTYQELTRRLADPDIATNPDELQRVAKARSSLEETVNTYKTWQETQEELKGAKQI 75

Query: 76  ALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E      ++E +        ++++   E  +   L     D  +  LE+ AG GG E+
Sbjct: 76  VKEAGGDPEMREMAAMEVSELEEKLEQLEERLKILLLPRDPNDDKNIMLEIRAGTGGDEA 135

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY+R+AE +K+  + +     +  G K A L I G   Y  LK E GVHR+
Sbjct: 136 SIWAGDLVRMYSRYAESQKWNVKLVSESLADMGGFKEAILEITGDQVYSKLKFEAGVHRV 195

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P   D +EI+I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 196 QRVPVTEAGGRVHTSTATVAIMP-EVDEVEIQIDPKDIEMTTARSGGAGGQNVNKVETAV 254

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +N+ +A  +LRAKLYE +L++++E   +    ++++G G 
Sbjct: 255 DLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEAKLREQQE--AVSSMRRSQVGTGS 312

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R   +  + +  L+G++D+ ++  ++  +
Sbjct: 313 RSEKIRTYNYKD-NRVTDHRLG-QNFALAGALEGNIDNIIETCISQDQ 358


>gi|329848654|ref|ZP_08263682.1| peptide chain release factor 1 [Asticcacaulis biprosthecum C19]
 gi|328843717|gb|EGF93286.1| peptide chain release factor 1 [Asticcacaulis biprosthecum C19]
          Length = 358

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 107/346 (30%), Positives = 173/346 (50%), Gaps = 14/346 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R   +  + E      +  E   L +E   +      ++ +         L E+
Sbjct: 9   LDQVMDRFRMIEARMES---TTDGAEIVRLSKEHAEIKPVCDAVERLLKARNQVPELEEM 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ---FESLLSGEADSNDAYLEVHAGAGGTESQD 132
               D         +     +   + ++          + ++  A LE+ AG GG E+  
Sbjct: 66  IALGDPDLAPLAEEELGALKESLPDLERGVALLLAPKDKDENASAILELRAGTGGDEAAL 125

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+A  + +K E   + +GE  G K     + G   +G LK E GVHR+ R
Sbjct: 126 FAGDLFRMYSRYAAAQGWKVEVDSLSEGEAGGFKEIIASVTGEGVFGKLKFESGVHRVQR 185

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P   + +EIEI + D RIDTYR+SGAGGQHVN TDSAVRI
Sbjct: 186 VPATEAGGRIHTSAATVAVLP-EAEDVEIEIHDKDLRIDTYRSSGAGGQHVNKTDSAVRI 244

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV    E+SQH+N+A A   L+A++Y+  +Q++       +S K+++G G   
Sbjct: 245 THLPTGIVVTSS-EKSQHQNRAIAMRNLKARMYD--MQRQALDTARSDSRKSQVGSGDRS 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+   +    ++GD+   + A +A  +
Sbjct: 302 ERIRTYNY-PQGRVSDHRINLTLYNLPQFMEGDMGQMINALIAEDQ 346


>gi|150021273|ref|YP_001306627.1| peptide chain release factor 1 [Thermosipho melanesiensis BI429]
 gi|149793794|gb|ABR31242.1| peptide chain release factor 1 [Thermosipho melanesiensis BI429]
          Length = 358

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 128/333 (38%), Positives = 179/333 (53%), Gaps = 14/333 (4%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           L FL  K           E K    +   +   +   K+  +        +EL  EE   
Sbjct: 18  LKFLEEKLSSQLT---PEEIKKYSEKYSKMKEIVELSKKYLEL----EEEIELWKEEMPE 70

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
               E      + +  ++      L   E    + +LE+ AG GG E+  +A  LLRMY 
Sbjct: 71  GFENEIEKLSDQQRKIMQELITLVLPKNEYSGKNVFLEIRAGTGGEEAALFAADLLRMYL 130

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           R+ EK+ FK E ++ +  +  G K   + IKG N    LK E GVHR+ R+   +S  R 
Sbjct: 131 RYVEKKNFKAEIVDENKTDLGGYKEVVVRIKGKNVGNLLKYESGVHRVQRVPTTESGGRI 190

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTS +++ V P    ++EIEI+ SD RIDTYRASGAGGQ+VN T+SAVRITHIPTG+VV 
Sbjct: 191 HTSTATVAVLP-EVSNVEIEINPSDIRIDTYRASGAGGQYVNKTESAVRITHIPTGIVVT 249

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQP 319
           CQ ERSQ +NK QA N+LRA+LY+L+L+  E+   I  + K++IG G +   IR+Y   P
Sbjct: 250 CQSERSQLQNKEQAMNILRARLYKLKLE--EQAKKISSNRKSQIGTGERSEKIRTYNF-P 306

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              V D R N    +   VLDG+LD+F+   + 
Sbjct: 307 QNRVTDHRINYTSYNLQAVLDGELDEFITRLMR 339


>gi|315453082|ref|YP_004073352.1| peptide chain release factor 1 [Helicobacter felis ATCC 49179]
 gi|315132134|emb|CBY82762.1| peptide chain release factor 1 [Helicobacter felis ATCC 49179]
          Length = 349

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 107/345 (31%), Positives = 174/345 (50%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               VQR   +      P +  ++ +   L +E+  L+      K     L        L
Sbjct: 6   LQAIVQRYDAIAHSLTQPEVLGDIKQLTELSKEQAGLEELAQVAKTYLQTLEGIQENKSL 65

Query: 76  ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++      +E     +      E  +   +     D+ + YLE+ AG GG E+  + 
Sbjct: 66  LEDKELGELAKEELKVLEEEKLSLEERIKILLIPKDPNDNKNIYLELRAGTGGDEAGIFV 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 126 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEMIALIKGQGVYSRLKFEAGTHRVQRVP 185

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P   D +E+ I+ +D RI+ +RA G GGQ VNTTDSAVRITH
Sbjct: 186 ETESQGRIHTSAVTVAIMP-EVDDVEVNINPNDLRIEVFRAGGHGGQCVNTTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+ V  Q E+SQHKN+ +A  +L+A+LYE +++++++     ES K ++G G    +
Sbjct: 245 IPTGISVSMQDEKSQHKNRDKALKILKARLYEKQIEEQQQAN--SESRKMQVGSGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+   S  +++  G+LD  ++  +A  +
Sbjct: 303 IRTYNY-PQNRLSDHRINLTLYSLEEIMLSGNLDPVIEPLIAHAQ 346


>gi|256833004|ref|YP_003161731.1| peptide chain release factor 1 [Jonesia denitrificans DSM 20603]
 gi|256686535|gb|ACV09428.1| peptide chain release factor 1 [Jonesia denitrificans DSM 20603]
          Length = 361

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 170/344 (49%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + +  +  D  +  +   A+ L R    L   +S  +  +    D     ++
Sbjct: 8   VEPLLGEYADIEAQLSDASVHSDQARARQLGRRYAELGQVVSAYRAWRSATDDLDAARDM 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E+   +      ++      E   +    +     DS D  LE+ AG GG ES  +A 
Sbjct: 68  AEEDPSFAEEIPAMEHAAAEASERLRRVL--IPRDPDDSRDVILEIKAGEGGAESALFAA 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVH 188
            LLRMY R+AE++ ++TE +   + +  G K   + +            +  LK E GVH
Sbjct: 126 DLLRMYLRYAERQGWRTEIIGATESDLGGYKDVQVAVKARGQVTPEEGVWAHLKYEGGVH 185

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS   + V+P V+D  E+EI ++D RID YR+SG GGQ VNTTDS
Sbjct: 186 RVQRVPVTESQGRIHTSAVGVLVFPEVEDEGELEIDQNDLRIDVYRSSGPGGQSVNTTDS 245

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307
           AVRITHIPTG+VV  Q E+SQ +N+ QA  +LRA+L     ++    A     S+   + 
Sbjct: 246 AVRITHIPTGIVVSMQNEKSQLQNREQAMRVLRARLLAARQEEAAAAAQDMRRSQVRTVD 305

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y   P   + D RT  +  +   VLDGD+   +++ +
Sbjct: 306 RSERIRTYNF-PENRIADHRTGFKSYNLDQVLDGDVQPVVQSAI 348


>gi|160885362|ref|ZP_02066365.1| hypothetical protein BACOVA_03361 [Bacteroides ovatus ATCC 8483]
 gi|237716574|ref|ZP_04547055.1| peptide chain release factor RF-2 [Bacteroides sp. D1]
 gi|237720319|ref|ZP_04550800.1| peptide chain release factor RF-2 [Bacteroides sp. 2_2_4]
 gi|260172304|ref|ZP_05758716.1| peptide chain release factor RF-2 [Bacteroides sp. D2]
 gi|262405351|ref|ZP_06081901.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|293370547|ref|ZP_06617099.1| putative peptide chain release factor 2 [Bacteroides ovatus SD CMC
           3f]
 gi|294644599|ref|ZP_06722352.1| putative peptide chain release factor 2 [Bacteroides ovatus SD CC
           2a]
 gi|294810341|ref|ZP_06769002.1| putative peptide chain release factor 2 [Bacteroides xylanisolvens
           SD CC 1b]
 gi|315920609|ref|ZP_07916849.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156108984|gb|EDO10729.1| hypothetical protein BACOVA_03361 [Bacteroides ovatus ATCC 8483]
 gi|229442557|gb|EEO48348.1| peptide chain release factor RF-2 [Bacteroides sp. D1]
 gi|229450070|gb|EEO55861.1| peptide chain release factor RF-2 [Bacteroides sp. 2_2_4]
 gi|262356226|gb|EEZ05316.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292634281|gb|EFF52818.1| putative peptide chain release factor 2 [Bacteroides ovatus SD CMC
           3f]
 gi|292640036|gb|EFF58301.1| putative peptide chain release factor 2 [Bacteroides ovatus SD CC
           2a]
 gi|294442449|gb|EFG11255.1| putative peptide chain release factor 2 [Bacteroides xylanisolvens
           SD CC 1b]
 gi|295086344|emb|CBK67867.1| bacterial peptide chain release factor 2 (bRF-2) [Bacteroides
           xylanisolvens XB1A]
 gi|313694484|gb|EFS31319.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 319

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 123/315 (39%), Positives = 188/315 (59%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+  + L   I    E++    +  +  +     ++    ++      +    VE  + +
Sbjct: 1   MKLVKDLQKWIEGYNELKTLADELELAFDFYK--EELVTEEDVDAAYAKASEAVEALELK 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  EAD  D  L++++GAGGTESQDWA+ML+RMY R+AE   +K     + +G+EAGI
Sbjct: 59  NMLRDEADQMDCVLKINSGAGGTESQDWASMLMRMYLRYAETNGYKATIANLQEGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T+ I+G  AYG+LKGE GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+ I  
Sbjct: 119 KTCTINIEGDFAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNILP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAW 277
           ++   DT+R+ GAGGQ+VN  +S VR+ +            ++++  + R Q KN+  A 
Sbjct: 179 ANISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNRENAM 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
             LR+ LY+ ELQ R       E+ K +I WG QIRSYV    + VKD RTN + +  + 
Sbjct: 239 RQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNG 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DG +D F+KA L 
Sbjct: 298 VMDGKIDGFIKAYLM 312


>gi|120602348|ref|YP_966748.1| peptide chain release factor 2 [Desulfovibrio vulgaris DP4]
 gi|120562577|gb|ABM28321.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfovibrio
           vulgaris DP4]
          Length = 310

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 158/300 (52%), Positives = 206/300 (68%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L+  I+ ++ ++    D    L LA E++    L+   + + R++  +E  +   LLSG+
Sbjct: 2   LEGEINRLEALETCRNDVSEWLLLAEEDESAEALESLEEQIIRLEQLIEETEMNLLLSGK 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D   A LE+H GAGGTE+QDWA MLLRMY RWA+   +KTE L+  DG+EAGIKS TL 
Sbjct: 62  EDRFAALLEIHPGAGGTEAQDWAEMLLRMYLRWADTHGYKTEYLDYLDGDEAGIKSVTLR 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I GPNAYG LKGE+G+HRL+RISP+D++ RRHTSF+S+ V P V   I+IEI ++D RID
Sbjct: 122 IAGPNAYGLLKGERGIHRLIRISPFDASGRRHTSFASVDVIPDVGQDIKIEIKDTDLRID 181

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            +R+SG GGQ VNTT SAVR+THIPTG+V QCQ E+SQH NK  A  +LR +LYELEL+K
Sbjct: 182 VFRSSGPGGQSVNTTSSAVRVTHIPTGIVAQCQNEKSQHHNKDSALQILRGRLYELELRK 241

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            EE       +K  IG+G QIR+Y LQPY++VKD RTN E      VLDG LD  ++  L
Sbjct: 242 LEEEKKAQYGAKDAIGFGSQIRTYTLQPYRLVKDHRTNTEVGDVEAVLDGRLDKLLRDYL 301


>gi|285017297|ref|YP_003375008.1| peptide chain release factor 1 (rf-1) protein [Xanthomonas
           albilineans GPE PC73]
 gi|283472515|emb|CBA15020.1| probable peptide chain release factor 1 (rf-1) protein [Xanthomonas
           albilineans]
          Length = 361

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 106/325 (32%), Positives = 163/325 (50%), Gaps = 8/325 (2%)

Query: 31  EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED-DCSILQETS 89
            DP +  +    +   RE   L    + + E      +      +  + +      +E +
Sbjct: 24  SDPEVVSDHQRFRDYSREFAQLQPVATALAEETAAKANLASAEAMRADPELRELAEEEIA 83

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
                +           +     D  + +LEV AG GG E+  +A  L RMY R+AE++ 
Sbjct: 84  AAQAHLADLDAQLALLLVPRDPRDDGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQG 143

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +K E    + GE  G K     I G  AY  LK E G HR+ R+   +S  R HTS +++
Sbjct: 144 WKVEVESDNPGEHGGYKEIVARIVGRGAYSKLKFESGTHRVQRVPATESQGRIHTSAATV 203

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            + P  DD  EI ++ +D +IDT+R+SGAGGQHVN T+SA+RITH+P+GVVV+CQ ERSQ
Sbjct: 204 AIIPEADDVEEIAVNPADLKIDTFRSSGAGGQHVNKTESAIRITHVPSGVVVECQTERSQ 263

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDL 326
           H N+ +A   L+A+L + E  K+   A   +  K ++G G    +IR+Y   P   + D 
Sbjct: 264 HANRDKALKRLKAQLLDAERNKQ--AAAEAQDRKLQVGSGDRSQRIRTYNF-PQGRITDH 320

Query: 327 RT-NIEKTSPSDVLDGDLDDFMKAT 350
           R   +       V++GDLD  ++  
Sbjct: 321 RVEGLTLYDLPHVIEGDLDALIERL 345


>gi|86606113|ref|YP_474876.1| peptide chain release factor 1 [Synechococcus sp. JA-3-3Ab]
 gi|119361625|sp|Q2JUK1|RF1_SYNJA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|86554655|gb|ABC99613.1| peptide chain release factor 1 [Synechococcus sp. JA-3-3Ab]
          Length = 361

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 112/345 (32%), Positives = 171/345 (49%), Gaps = 14/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
             N       L  +  DP +  +  E + + + R  L+  +    E Q     L     L
Sbjct: 10  LKNVEATFQELTVRLADPDVATDPAELQRIAKARSSLEATVQTFHEWQKLTRELKQTEEL 69

Query: 73  LELALEEDDC---SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           L     +D         E      R +   E      L     D  +  LE+ AG GG E
Sbjct: 70  LREVASDDPELEAMARAELEQLRVRQEQLEEKLTLLLLPRDPNDEKNIMLEIRAGTGGEE 129

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  WA  L RMYTR+AEK  +      + +GE  G K A L I+G   Y  LK E GVHR
Sbjct: 130 AALWAADLARMYTRYAEKMGWSVRLASLSEGEMGGYKEAILEIRGDQVYSKLKFEAGVHR 189

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R HTS +++ V P   D +E+ I   D  I T R+ GAGGQ+VN  ++A
Sbjct: 190 VQRVPVTEAQGRVHTSTATVAVMP-EVDEVEVVIDPKDIEIKTARSGGAGGQNVNKVETA 248

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           V + H PTG+ V C +ERSQ +N+ +A  +LRAKLYE++LQ+++  A+I  + + ++G G
Sbjct: 249 VDLLHKPTGIRVFCTEERSQLQNRQRAMQILRAKLYEMKLQEQQ--ASISSARRMQVGTG 306

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
               +IR+Y  +    V D R N +      +L+G+LD+ ++A +
Sbjct: 307 SRSEKIRTYNYKD-NRVTDHRLN-QNFLLEPILEGELDELIQACI 349


>gi|220963008|gb|ACL94364.1| bacterial peptide chain Release factor 1 (RF-1) [Caulobacter
           crescentus NA1000]
          Length = 335

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 112/323 (34%), Positives = 175/323 (54%), Gaps = 10/323 (3%)

Query: 38  NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKL 97
           +  E   L +E   L      ++ +     +   L  +A + +   ++++    L     
Sbjct: 6   DGAEIVKLSKEHAELRPVAEAVERLAKLSAERAELDVMASDPEMAEMVRDEIQALDEKLP 65

Query: 98  -EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
                         + ++  A LEV AG GG E+  +A  L RMY R+A+ + ++ E   
Sbjct: 66  VMERELALMLAPKDKDENASAILEVRAGTGGDEAALFAGDLFRMYQRYAQTQGWRVEIDS 125

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
           I +GE  G K     I G   +G LK E GVHR+ R+   ++  R HTS +++ V P   
Sbjct: 126 ISEGEMGGFKEIVASITGDGVFGRLKFESGVHRVQRVPATEAQGRIHTSAATVAVLP-EA 184

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           + +EIEI ESD RIDTYR+SGAGGQHVN TDSAVRITH+PTGVVV    E+SQH+N+A+A
Sbjct: 185 EDVEIEIKESDLRIDTYRSSGAGGQHVNKTDSAVRITHLPTGVVVTSS-EKSQHQNRARA 243

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
              L+A+LY+++ +  +  +   E+ K+++G G    +IR+Y   P   V D R N+   
Sbjct: 244 MKNLKARLYDMQREALD--SARSEARKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLY 300

Query: 334 SPSDVLDGD-LDDFMKATLAIKK 355
           + + +++GD LDD +   +A  +
Sbjct: 301 NLARIMEGDALDDVINPLIAEDQ 323


>gi|326382082|ref|ZP_08203775.1| peptide chain release factor 1 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326199508|gb|EGD56689.1| peptide chain release factor 1 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 364

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 113/348 (32%), Positives = 167/348 (47%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +   + L  +  DP L  +   A+ + +    L   ++   ++     D     EL
Sbjct: 16  IDDILAEHAGLQAQLSDPALHDDPANARRVGKRFAELAPVMTTYTKLTAARDDLEAAREL 75

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A  +   +      +                      DS+D  LEV +GAGG ES  +A+
Sbjct: 76  AEADAAFAEEIPALEATVTELDATLTDLL--APRDPHDSDDVVLEVKSGAGGEESALFAS 133

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190
            L+RMY ++ E+  +K   L   + +  G K ATL IK         +  LK E GVHR+
Sbjct: 134 DLVRMYLKYCERHGWKATVLGATESDLGGYKEATLSIKARETVRDGVWSRLKFEGGVHRV 193

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + +YP  D+  EI+I ESD RID YR+SG GGQ VNTTDSAV
Sbjct: 194 QRVPVTESQGRIHTSAAGVLIYPEPDEVEEIQIDESDLRIDVYRSSGKGGQGVNTTDSAV 253

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307
           RITH+PT +VV CQ ERSQ +NKA+A  +L A+       + E  A      + +I    
Sbjct: 254 RITHLPTNIVVTCQNERSQLQNKARAMQVLAAR--LKAAAEEEAEAEASAGRQAQIRTVD 311

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   + D R   +  +   VL G++D  + A +   K
Sbjct: 312 RSERIRTYNF-PENRITDHRIGYKANNLDSVLGGEMDALLDALVEADK 358


>gi|291460253|ref|ZP_06599643.1| peptide chain release factor 1 [Oribacterium sp. oral taxon 078
           str. F0262]
 gi|291417200|gb|EFE90919.1| peptide chain release factor 1 [Oribacterium sp. oral taxon 078
           str. F0262]
          Length = 360

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 117/352 (33%), Positives = 185/352 (52%), Gaps = 12/352 (3%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            +F+  +   +    L      P L  ++   + L+RE+  L+         +       
Sbjct: 2   RMFENLEEVRRHYEELMLSLTRPELSNDIARYRKLIREQSELEPLYKTYLAFRKAEESER 61

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAG 126
             LEL  +E D  +L+   + LQ  K E     E  +   L   E D  +  +E+  GAG
Sbjct: 62  DALELLQKEKDPELLEMAKEELQNAKEEQSLLGEKLRLLLLPKDENDDKNIVMEIRGGAG 121

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMY  +AE+R F+TE +  H+    G+K    ++ G  AY  LK E G
Sbjct: 122 GEEAALFAAELYRMYMSYAERRGFRTELVSFHETGLGGLKEVIFIVDGQGAYSRLKYESG 181

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS +++ V P     +E+EI  SD R++ +R+SGAGGQH+N T
Sbjct: 182 VHRVQRVPETESGGRIHTSTATVAVMP-EAGEVEVEIKPSDVRMEVFRSSGAGGQHINKT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            SAVR+ HIP+G+V +CQ+ERSQ +N+ +A  +LRA+LYE+E +KR E +      ++++
Sbjct: 241 SSAVRLIHIPSGMVAECQEERSQLQNREKAMRLLRARLYEIESRKRHEES--AAEKRSQL 298

Query: 307 GWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G +   IR+Y   P   V D R  +      ++L GDLD  +   +  ++
Sbjct: 299 GTGERSEKIRTYNF-PQGRVTDHRIKLSLYCLEEILGGDLDPLIDPLITAEQ 349


>gi|158312864|ref|YP_001505372.1| peptide chain release factor 1 [Frankia sp. EAN1pec]
 gi|238686837|sp|A8L3V1|RF1_FRASN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|158108269|gb|ABW10466.1| peptide chain release factor 1 [Frankia sp. EAN1pec]
          Length = 356

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 112/343 (32%), Positives = 170/343 (49%), Gaps = 12/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               +   + +  +  DP +  +   A+ L R    L   +   + ++    D     E 
Sbjct: 5   LAGMIAEHADIEKRLADPDIHNDPARARELTRRYAELATPVDLAQRLERVEGDLETAREF 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A ++          +  Q             +     DS DA LEV AGAGG ES  +A 
Sbjct: 65  AEQDPSFRDEVVALEASQADLAARLRAYL--VPVDPDDSRDAILEVKAGAGGEESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-------YGWLKGEQGVH 188
            LLRMY R+AE+R ++T+ L+ +  +  G +  ++ +K           +G L+ E GVH
Sbjct: 123 DLLRMYLRYAERRGWRTQILDANPSDLGGYRDVSVAVKSRGTAAPGQGVFGRLRFEGGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V P     ++IE+  +D RID +R+SG GGQ VNTTDS
Sbjct: 183 RVQRVPVTESAGRIHTSAAGVLVLP-EAADVDIEVDPNDLRIDVFRSSGPGGQSVNTTDS 241

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307
           AVRITH+PTGVVV CQ E+SQ +NK  A  +LRA+L     +K E  A    +S+   + 
Sbjct: 242 AVRITHLPTGVVVSCQNEKSQLQNKESAMRILRARLLAAAREKAETAAAAARASQVRTVD 301

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              ++R+Y   P   + D R   +  +   VLDGDLD  ++A 
Sbjct: 302 RSEKVRTYNF-PENRISDHRIGYKAHNLEAVLDGDLDAVIEAL 343


>gi|124026680|ref|YP_001015795.1| peptide chain release factor 1 [Prochlorococcus marinus str.
           NATL1A]
 gi|229470356|sp|A2C4X1|RF1_PROM1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|123961748|gb|ABM76531.1| peptide chain release factor RF-1 [Prochlorococcus marinus str.
           NATL1A]
          Length = 365

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 101/348 (29%), Positives = 170/348 (48%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + A      L  +  DP +  +  + + + RER  L+  ++   ++Q    + L    L
Sbjct: 10  LETAKSSFQNLELQLADPDVASDPKQLETIARERSRLEPLVNDYLKLQIIEKECLEAKGL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130
             E  D   ++  +    +     + +  + L          D     LE+ AGAGG E+
Sbjct: 70  VKESRDDKEMELLAREELQNLELSKNELIQKLTLALLPKDPRDERSVMLEIRAGAGGNEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+ +K  +  + +   + +  G +   + +KG + Y  LK E GVHR+
Sbjct: 130 CLWAGDLARMYERYGQKLGWNVKPISSTEADMGGFREMIISVKGESVYSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +E++I  +D  I T R+ GAGGQ+VN  ++A+
Sbjct: 190 QRVPSTESQGRVHTSTATVAVMP-EADPVEVKIESTDLEISTARSGGAGGQNVNKVETAI 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H P+G+ V C QERSQ +N+ +A  +LRAKL ELE+   E  A    +  +++G G 
Sbjct: 249 DLFHKPSGIRVFCTQERSQMQNRERAMEILRAKLLELEIA--EANAKERSARLSQVGTGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R  +       VL G L+D + A +A ++
Sbjct: 307 RSEKIRTYNYKD-NRTTDHRLGVNFP-LEQVLSGQLEDVIGACIAEEQ 352


>gi|91201018|emb|CAJ74075.1| strongly similar to class I peptide chain release factor
           [Candidatus Kuenenia stuttgartiensis]
          Length = 360

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 105/339 (30%), Positives = 176/339 (51%), Gaps = 8/339 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R + L     DP +  +      LM+E   L   +    ++            L
Sbjct: 10  LEDMQKRYNELENLLADPQVIADSGRYMSLMKEHGCLSKIVHKYAQLTKTYIRKQDAENL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN-DAYLEVHAGAGGTESQDWA 134
             + +   + +   D L+  +  +  +  E  ++ +  +N +   E+ AG GG E+  +A
Sbjct: 70  LSDGEFADMARMELDELEGHEKAIMDEIKELFIAEDKTANKNVIAEIRAGTGGEEAAIFA 129

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY ++AE + +KTE  + ++ +  G K  T  I+G N Y  L+ E G HR+ R+ 
Sbjct: 130 ADLFRMYIKYAESQNWKTELFDYNETDLGGFKEVTFSIEGRNVYQKLRFESGTHRVQRVP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +++ R HTS +++ + P   + +EI+I+ +D  I+T+RASG GGQ VN T SAVRITH
Sbjct: 190 QTEASGRVHTSTATVAILP-EVEEVEIDINPADILIETFRASGPGGQKVNKTSSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           I TG+VV+C  E+SQHKNKA+A  +LR++L+E   +K +   +     + +IG G    +
Sbjct: 249 ISTGIVVKCLDEKSQHKNKAKAMRILRSRLHESIEEKNQLERDQV--RRIQIGTGDRSEK 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y       V D R N    +   V+ G LD+ + A 
Sbjct: 307 IRTYNYS-QNRVTDHRINFSVYNLEHVMLGYLDEIIAAL 344


>gi|297180646|gb|ADI16856.1| protein chain release factor a [uncultured alpha proteobacterium
           HF0010_13E22]
          Length = 359

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 120/348 (34%), Positives = 179/348 (51%), Gaps = 14/348 (4%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D  + R   + +   D        E   L RE   L      I  ++    D    + LA
Sbjct: 8   DKVLARRDEVESWLADAASMS-PDELASLSRELSELRPVCEQIDLVRRLEGDRDAAVMLA 66

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQ-----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
            E  D + + E +    +       ++        L     DS +A LEV AG GG E+ 
Sbjct: 67  EEAADDAEMAEMAQAEIQEIEARLPEEMNSLQLLLLPRDRDDSRNAILEVRAGTGGDEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A+ L  MY R+A K  ++ E +E+ +    G K AT  I G + +  LK E GVHR+ 
Sbjct: 127 LFASDLFGMYQRFAAKHGWRFEVMEVSETGIGGYKEATANIAGSDVFARLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + ++I++ +SD RID +RASG GGQ VNTTDSAVR
Sbjct: 187 RVPETEAGGRIHTSAATVAVLP-EAEDVDIDVQDSDLRIDVFRASGPGGQSVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+VV  Q E+SQHKN+A+A  +LRA+LY+ E  + +       S K ++G G  
Sbjct: 246 ITHIPTGIVVSQQDEKSQHKNRAKAMKILRARLYDAERARLQAER--AASRKGQVGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
             +IR+Y   P   V D R N+       V+ G+ LD+ ++A +A  +
Sbjct: 304 SERIRTYNF-PQGRVTDHRINLTLYKLDKVIAGEALDEVVEALVAEDR 350


>gi|75906944|ref|YP_321240.1| peptide chain release factor 1 [Anabaena variabilis ATCC 29413]
 gi|119361508|sp|Q3MF91|RF1_ANAVT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|75700669|gb|ABA20345.1| bacterial peptide chain release factor 1 (bRF-1) [Anabaena
           variabilis ATCC 29413]
          Length = 366

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 102/348 (29%), Positives = 179/348 (51%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q  + L  +  DP   +N  E + + + R  L+  ++  +  +    + +   ++
Sbjct: 10  LKSVEQTFNELTRRLADPDTARNPDEYQKIAKSRSSLEEVVNTYETWKIAQEELIGARQV 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130
             E +    LQE +        E         +   L     D  +  LE+ AG GG E+
Sbjct: 70  LKESNSDPELQEIAALEVNELEEKIKYLETRLKVLLLPRDPNDDKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  LLRMY+R+A+ + ++ + +    GE  G K   L I+G + Y  LK E GVHR+
Sbjct: 130 SIWAGDLLRMYSRYADTQGWRVKLVSESLGEMGGFKEVILEIQGDSVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P   D +EI I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATEAGGRVHTSTATVAIMP-EVDEVEIHIDPKDIEMTTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +NK +A  +LRAKLYE++L++++E   +    ++++G G 
Sbjct: 249 DLMHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQQEE--VTSMRRSQVGTGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R   +  S + VL+GDL+  +++ ++  +
Sbjct: 307 RSEKIRTYNYKD-SRATDHRLG-QNFSLNPVLEGDLETVIQSCISQDQ 352


>gi|32491094|ref|NP_871348.1| hypothetical protein WGLp345 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|30173141|sp|Q8D2K9|RF1_WIGBR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|25166301|dbj|BAC24491.1| prfA [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 364

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 107/340 (31%), Positives = 175/340 (51%), Gaps = 7/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   +     DP   +      +L +E   L+    ++K ++           +
Sbjct: 15  LKKLKNRYKEIKIILSDPFSAKKQKNFFLLSKEYSKLNILNKYLKSLESINNTIESTKTM 74

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134
            L+ +   + +   +  +  K  +E K     + + +    + ++E+ +G GG E+  + 
Sbjct: 75  LLDPEMHDLAKNEINIYKNKKKLIEKKIILYLIPNEDEYICNCFIEIRSGTGGKEASLFV 134

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY +++E + +KT+ +   + E  G K   + I   NAY  LK E G HR+ RI 
Sbjct: 135 RDLCRMYIKYSEIKNWKTDIINYSNSEHGGYKEVIIKICNKNAYNKLKFESGGHRVQRIP 194

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  +I V P + D    +I  SD RIDT+R+SGAGGQH+NTTDSA+RITH
Sbjct: 195 ETESQGRIHTSTCTIAVMPEMLDFKLPKIKTSDLRIDTFRSSGAGGQHINTTDSAIRITH 254

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPT +VV+CQ ERSQHKNK++A  +L+++L    L+ +++   I    K+ +G G    +
Sbjct: 255 IPTNIVVECQDERSQHKNKSKAMLVLKSRLQANLLKNKKQKEEII--RKSLLGSGDRSDR 312

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           IR+Y   P   + D R N+      +V+DG+L+  +   L
Sbjct: 313 IRTYNF-PQGRITDHRINLTIYKIDEVMDGNLNILINPIL 351


>gi|224531646|ref|ZP_03672278.1| peptide chain release factor 1 [Borrelia valaisiana VS116]
 gi|224511111|gb|EEF81517.1| peptide chain release factor 1 [Borrelia valaisiana VS116]
          Length = 357

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 128/342 (37%), Positives = 192/342 (56%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLI- 71
            ++A  ++  L  K +D +L +N  E   +++E  HL+   +     ++I  ++ DN   
Sbjct: 6   LNSATSKIKSLEEKLQDINLIKNQKEYSKIIKEYTHLEKINTKKIEYEKILSQINDNKTI 65

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L +   +E    I QE  D  ++ +      +   L   E DS +  +E+ AG GG E+ 
Sbjct: 66  LEKEEQQEMKELIKQELIDLDKKKEDIEHQIKILLLPQDENDSKNIIIEIRAGTGGEEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +AN L  MY +++EK+K+KTE +  ++ E  G K     IKG + +  LK E GVHR+ 
Sbjct: 126 LFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +SN R  TS +++ V P ++++     +E D RID YR+SGAGGQHVNTTDSAVR
Sbjct: 186 RIPITESNGRLQTSAATVAVLPNIEETEIEI-NEKDLRIDVYRSSGAGGQHVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PT +VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++G G  
Sbjct: 245 ITHLPTRIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   + D R NI      + + G+LD  +   
Sbjct: 303 SERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDPLLDPL 343


>gi|298491428|ref|YP_003721605.1| peptide chain release factor 1 ['Nostoc azollae' 0708]
 gi|298233346|gb|ADI64482.1| peptide chain release factor 1 ['Nostoc azollae' 0708]
          Length = 364

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 104/348 (29%), Positives = 177/348 (50%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q    L  +  DP   +N  E + + + R  L+  ++  +  +    + +   ++
Sbjct: 10  LQSVEQTFHELTRRLADPDTAKNPDEYQKIAKSRSSLEEVVNTYETWKIAQEELVGARQV 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130
             E +    LQE +    +   E         +   L     D  +  LE+ AG GG E+
Sbjct: 70  LKESNSDPELQEMAALEVKELEEKLEYLESRLKVLLLPCDPNDDKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  LLRMY+R+A+ + +K + +    GE  G K   L I+G   Y  LK E GVHR+
Sbjct: 130 SIWAGDLLRMYSRYADTQGWKVKLVSQSLGEMGGFKEVILEIQGDRVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS ++I + P   D +EI I   D  + T R+ GAGGQ+VN  ++A 
Sbjct: 190 QRVPATESGGRVHTSTATIAIMP-EVDDVEIHIDPKDIEMSTARSGGAGGQNVNKVETAA 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +NK +A  +LRAKLYE++L++++E   +    ++++G G 
Sbjct: 249 DLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQQE--AVTSMRRSQVGTGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R      + + VL+GDL+  +++ ++  +
Sbjct: 307 RSEKIRTYNYKD-SRVTDHRLG-NNFTLNPVLEGDLETIVQSCISQYQ 352


>gi|78211899|ref|YP_380678.1| peptide chain release factor 1 [Synechococcus sp. CC9605]
 gi|119361630|sp|Q3AMQ9|RF1_SYNSC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78196358|gb|ABB34123.1| peptide chain release factor 1 [Synechococcus sp. CC9605]
          Length = 365

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 101/348 (29%), Positives = 169/348 (48%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + A      L  +  DP +  +    + + RER  L+  +   +E+Q    +     +L
Sbjct: 10  LETATASFRNLERQLADPDVAADPKRLESIARERSRLEPLVLDFEELQRLESERDSARQL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130
             +    + ++E + +      E      E L          D     LE+ AGAGG E+
Sbjct: 70  LKDSRGDAAMEELAQDELASLQEQHATLTERLTLALLPRDPRDERSVMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+++K  +  +++   + +  G +   L ++G + Y  LK E GVHR+
Sbjct: 130 CLWAGDLARMYERYSQKVGWAVQSISCTEADLGGFRELILSVRGDSVYSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D++E+++   D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADAVEVQLDPKDLDISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C QERSQ +N+ +A  +LRAKL  LE ++           + ++G G 
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERALEILRAKL--LEREQAAAAERESSDRRAQVGSGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R     T    VL+G L+D + A +A ++
Sbjct: 307 RSEKIRTYNYKD-NRTTDHRLGRNFT-LEPVLEGQLEDLIGACIAEEQ 352


>gi|16332286|ref|NP_443014.1| peptide chain release factor 1 [Synechocystis sp. PCC 6803]
 gi|2500139|sp|P74707|RF1_SYNY3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|1653916|dbj|BAA18826.1| peptide chain release factor [Synechocystis sp. PCC 6803]
          Length = 365

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 97/348 (27%), Positives = 169/348 (48%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q    L     DP +  N  E + + + R  L+  +   +  +    D     ++
Sbjct: 10  LASVEQTYQELTRMLADPDIATNPDELQRVAKARSSLEETVDTYETWKRSQEDLKGARQI 69

Query: 76  ALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E  +   ++E +               +      L     D  +  LE+ AG GG E+
Sbjct: 70  VKESGNDPEMREMAQLEVEELENAIGELEKRLTILLLPKDPNDEKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMYTR+AE + +K   L     +  G K A L +KG   Y  LK E GVHR+
Sbjct: 130 SIWAGDLVRMYTRYAESQGWKVSLLSESLADMGGFKEAILEVKGDRVYSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P   D +E++I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPVTEAGGRVHTSTATVAIMP-EVDDVEVKIDPKDIEMSTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +N+ +A  +LRAKLY++ LQ++ +   I  + ++++G G 
Sbjct: 249 DLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYDMMLQEQND--AISSNRRSQVGTGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R        +  L+G++   +++ ++  +
Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLGR-NFDLNTALEGEIHTIIESCISQDQ 352


>gi|56416889|ref|YP_153963.1| peptide chain release factor 1 [Anaplasma marginale str. St.
           Maries]
 gi|222475254|ref|YP_002563670.1| peptide chain release factor 1 (prfA) [Anaplasma marginale str.
           Florida]
 gi|255003238|ref|ZP_05278202.1| peptide chain release factor 1 [Anaplasma marginale str. Puerto
           Rico]
 gi|255004365|ref|ZP_05279166.1| peptide chain release factor 1 [Anaplasma marginale str. Virginia]
 gi|81599140|sp|Q5PAH2|RF1_ANAMM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790858|sp|B9KIV2|RF1_ANAMF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56388121|gb|AAV86708.1| peptide chain release factor 1 [Anaplasma marginale str. St.
           Maries]
 gi|222419391|gb|ACM49414.1| peptide chain release factor 1 (prfA) [Anaplasma marginale str.
           Florida]
          Length = 359

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 126/349 (36%), Positives = 183/349 (52%), Gaps = 14/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   ++   L  +  DP     V    +  RE   L   +S I+E Q    +   L  L
Sbjct: 7   LEGLCEKFRILKQQLSDPESLG-VQAFVVASREYSDLLPIMSLIEEYQTAQKEIEELEGL 65

Query: 76  ALEEDDCSILQETSDNLQRIK-----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
               D  + L   +      K           Q   L   + DS  A LE+ AG GG E+
Sbjct: 66  INSTDTDAELVHLAREELYTKQKLIPKLKHQLQLSLLPKDKDDSRSAILEIRAGTGGEEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +   L RMY ++AE++ +K E + I      G K A+L I G + +  LK E GVHR+
Sbjct: 126 ALFVCDLYRMYIKYAERKSWKVEPIGISTTGIGGYKEASLCIGGKDVFARLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S+ R HTS +++ V P   + ++++I E D RID YR+SG GGQ VNTTDSAV
Sbjct: 186 QRVPETESSGRLHTSAATVAVLP-EVEEVDLKIDEKDLRIDVYRSSGPGGQSVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG+VV  Q E+SQHKNK++A  +LRA+LY LE QK E+   I +  K++IG G 
Sbjct: 245 RITHIPTGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKIEDE--ISKMRKSQIGSGD 302

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
              +IR+Y       + D R N+       ++ +GDLD+F+ A +A  +
Sbjct: 303 RSERIRTYNFL-QSRITDHRINMTLYRLEHIMKEGDLDEFVDALIADDQ 350


>gi|320102129|ref|YP_004177720.1| peptide chain release factor 1 (bRF-1) [Isosphaera pallida ATCC
           43644]
 gi|319749411|gb|ADV61171.1| bacterial peptide chain release factor 1 (bRF-1) [Isosphaera
           pallida ATCC 43644]
          Length = 364

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 109/352 (30%), Positives = 176/352 (50%), Gaps = 13/352 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA---ISFIKEIQDRLCD 68
           +F+      +R   LN +   P L  +      LMRER  L       +   E+  R  +
Sbjct: 1   MFEKIKADYRRYEELNRELASPDLVNDPGRLAALMRERSALAKLAVPYARYLELTRRRAE 60

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ--FESLLSGEADSNDAYLEVHAGAG 126
              ++E   + +     Q   D L + + E            +  +D     +E+ AG G
Sbjct: 61  VQQVIETESDPEMKEYAQAEFDQLAQAEAESAEYLKTLIYEQATGSDHAGVIVEIRAGTG 120

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L  MY R+ E++ ++ E LEI   E  G + A+  ++G  AY  L+ E G
Sbjct: 121 GDEAALFARDLYEMYRRFVERQGWRFEPLEIAPTELGGFREASFGVRGEGAYRHLQFESG 180

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
            HR+ R+   ++  R HTS +++ V P   + +EIE+ + D +ID  RA G GGQH N T
Sbjct: 181 GHRVQRVPVTETQGRIHTSAATVAVLP-EPEEVEIELRDEDLQIDVMRAGGPGGQHQNKT 239

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +S VRITH+P+G+VV C+ ERSQHKNKA+A  +LR++LY  E Q+    +   ++ ++ I
Sbjct: 240 ESGVRITHLPSGIVVNCRDERSQHKNKAKALRILRSRLY--EAQRNAAQSQRSQTRRSLI 297

Query: 307 GWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R N+       ++ G+L+   +  +   +
Sbjct: 298 GSGDRSQRIRTYNF-PQNRVTDHRINLTLHQLDRIVAGELELVTRPLIEHDR 348


>gi|319787948|ref|YP_004147423.1| peptide chain release factor 1 [Pseudoxanthomonas suwonensis 11-1]
 gi|317466460|gb|ADV28192.1| peptide chain release factor 1 [Pseudoxanthomonas suwonensis 11-1]
          Length = 360

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 107/321 (33%), Positives = 166/321 (51%), Gaps = 8/321 (2%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP +  +    + L RE   L+   + +        D      +  + +   + QE    
Sbjct: 25  DPGVMGDPARFRDLSREFSQLEPVATALAAEARAREDLATAEAMRDDPELAELAQEEIAA 84

Query: 92  LQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
            +    +         +     D  + +LEV AG GG E+  +A  L RMY R+AE++ +
Sbjct: 85  ARGRLEQLDHELALLLVPKDPRDEGNLFLEVRAGTGGDEAALFAGDLFRMYARYAERQGW 144

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K E    + GE  G K     I G  AY  LK E G HR+ R+   +S  R HTS +++ 
Sbjct: 145 KVEVESDNPGEHGGHKEIVARIVGRGAYSKLKFESGTHRVQRVPATESQGRIHTSAATVA 204

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           + P  D+  EI I+ +D ++DT+R+SGAGGQHVN TDSA+RITH+P+G+VV+ Q ERSQH
Sbjct: 205 IIPEADEIEEITINPADLKVDTFRSSGAGGQHVNKTDSAIRITHLPSGLVVESQTERSQH 264

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLR 327
            N+ +A   L+A+L + E  K++  A   ES + ++G G    +IR+Y   P   + D R
Sbjct: 265 ANRDKAMKRLKAQLLDAERSKQQ--AAQAESRRLQVGSGDRSQRIRTYNF-PQGRITDHR 321

Query: 328 T-NIEKTSPSDVLDGDLDDFM 347
              +      ++L+GDLD  +
Sbjct: 322 VEGLTLYDLPNILEGDLDPLV 342


>gi|20139347|sp|Q9AG29|RF1_STRAG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|13487345|gb|AAK27505.1|AF343879_1 peptide chain release factor 1 [Streptococcus agalactiae]
          Length = 359

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 97/348 (27%), Positives = 165/348 (47%), Gaps = 12/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L     DP++  +      L RE  +    ++  +E +  + +     E+
Sbjct: 7   LQPVEDRYEELGELLSDPYVVSDTKRFMELSREEANTRETVTAYREYKQVIQNISDAEEM 66

Query: 76  ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + L+E +    +      +   E  +   L     D  +  LE+   AGG E+
Sbjct: 67  IKDASGDAELEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL MY ++AE + ++ E +E       GIK    ++ G + Y  LK E G HR+
Sbjct: 127 ALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + +E EI + D R D Y ASGAGGQ+VN   +AV
Sbjct: 187 QRVPVTESQGRVHTSTATVLVMP-EVEEVEYEIDQKDLRADIYHASGAGGQNVNKVATAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           R+ HIPTG+ V+ Q+ER+Q KN+ +A  ++RA++ +   Q  ++  +     K+ +G G 
Sbjct: 246 RMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQD--AERKSTVGTGD 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L G +D+ + A +   +
Sbjct: 304 RSERIRTYNF-PQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQ 350


>gi|255262532|ref|ZP_05341874.1| peptide chain release factor 1 [Thalassiobium sp. R2A62]
 gi|255104867|gb|EET47541.1| peptide chain release factor 1 [Thalassiobium sp. R2A62]
          Length = 351

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 118/341 (34%), Positives = 169/341 (49%), Gaps = 12/341 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  + R  FL  K           +   L +E   L   I  I E Q    D      +
Sbjct: 7   LEQILGRFQFLEAKMASGDA---ADDIAALAKEYSDLRPVIDVITEYQTLEADLAEAELM 63

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E    L+       +  Q   L    AD+  A +E+  G GG E+  +A
Sbjct: 64  MSDPDMKELAEEELPMLRARLPEIEQNLQIALLPKDAADARPAMIEIRPGTGGDEAALFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMY R+AE R +  E +E    E  GIK  T  +KG   +  +K E GVHR+ R+ 
Sbjct: 124 GDLLRMYQRYAEARGWTFEIIEEQSTELGGIKEVTAHVKGEGVFARMKYESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   + ++I+I   D RIDT RASG+GGQHVNTTDSAVRITH
Sbjct: 184 TTESGGRIHTSAATVAVLP-EAEDVDIQIDPGDLRIDTMRASGSGGQHVNTTDSAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IP+G+VV    E+SQH+N+  A   L+ +LY+ E Q+ +           +IG G    +
Sbjct: 243 IPSGIVV-VSSEKSQHRNREIAMLTLKTRLYDAERQRVDGER--SADRAAQIGSGDRSER 299

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   + D R N+       V+ GDLD+ ++A  A
Sbjct: 300 IRTYNF-PQGRMTDHRINLTLYKLDQVMQGDLDETIEALTA 339


>gi|166368082|ref|YP_001660355.1| peptide chain release factor 1 [Microcystis aeruginosa NIES-843]
 gi|189039979|sp|B0JYC5|RF1_MICAN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166090455|dbj|BAG05163.1| peptide chain release factor 1 [Microcystis aeruginosa NIES-843]
          Length = 366

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 105/348 (30%), Positives = 178/348 (51%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q    L  +  DP +  N  E   L + R  L+  ++  +  Q    D +   ++
Sbjct: 10  LQSVEQTYKELTRRLADPDVTGNPGELHRLAKSRASLEETVNTYEIWQKSQEDLIGAKQI 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E      L+E +        E      +      L     D  +  LE+ AG GG E+
Sbjct: 70  FKESASDPELREMAALEVAELEEKIATLEDQLTILLLPRDPLDEKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+R+Y+++AE + +K   L     +  G K A L IKG N Y  LK E GVHR+
Sbjct: 130 SIWAGDLVRLYSKYAETQNWKVSLLSESQADMGGFKEAILEIKGDNVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +++ R HTS +++ + P   D +E+ I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPLTEASGRVHTSTATVAIMP-EVDDVEVHIDPKDIELTTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C +ERSQ +N+ +A  +LRAKLY+++LQ+++E   +    ++++G G 
Sbjct: 249 DLIHKPTGIRVFCTEERSQLQNRERAMQILRAKLYDMKLQEQQE--AVSSMRRSQVGTGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    + D R N +  S   +LDGD+++ +++ +A  +
Sbjct: 307 RSEKIRTYNYKD-NRLTDHRLN-QNFSLDRILDGDIEEVIQSCIAKDQ 352


>gi|126664153|ref|ZP_01735146.1| peptide chain release factor RF-2 [Flavobacteria bacterium BAL38]
 gi|126623867|gb|EAZ94562.1| peptide chain release factor RF-2 [Flavobacteria bacterium BAL38]
          Length = 285

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 131/279 (46%), Positives = 198/279 (70%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +   ++     +E     Q     +E  +F ++LS E DS  A L++ AGAGGTES DWA
Sbjct: 1   MDFYKEGDVTEEEVETQYQHTLSHIEDLEFRNMLSDEGDSMSAVLQITAGAGGTESCDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           +ML+RMY  W EK+ +K + L   +GE AGIK+ TL  +G  A+G+LKGE GVHRLVRIS
Sbjct: 61  SMLMRMYLMWGEKQGYKIKELNFQEGEVAGIKTVTLEFEGDFAFGYLKGENGVHRLVRIS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DSN++RHTSF+S++VYP+VDD+IEI+I+ +D  I T R+SGAGGQ+VN  ++ V++ H
Sbjct: 121 PFDSNAKRHTSFASVYVYPLVDDTIEIDINPADIEIITSRSSGAGGQNVNKVETKVQLFH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
            PTG+ +QC + RSQ  N+ +A  ML+++LYE+EL+K++   +  E+ K +I WG QIR+
Sbjct: 181 KPTGIQIQCSETRSQQDNRQRAMQMLKSQLYEIELKKQQAQRSDIEAGKMKIEWGSQIRN 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           YV+ PY++VKD+R+  E +    +++G++D+F+KA L +
Sbjct: 241 YVMHPYKLVKDVRSGHESSDVEGIMNGEIDNFLKAYLMM 279


>gi|307154812|ref|YP_003890196.1| peptide chain release factor 1 [Cyanothece sp. PCC 7822]
 gi|306985040|gb|ADN16921.1| peptide chain release factor 1 [Cyanothece sp. PCC 7822]
          Length = 370

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 177/348 (50%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +       L  +  DP +  N  E + + + R  L+  ++  +  Q    +     ++
Sbjct: 10  LKSVELTYRELTRRLADPDIATNPDELQRVAKARSSLEETVNTYETWQKTKEELAGARQI 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130
             E      L+E +    +   +         +   L     D  +  LE+ AG GG E+
Sbjct: 70  LKESAGDLELREMAALEVQELEQQLETLESRLKVLLLPRDPNDDKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY+R+AE +++  + +     +  G K A L I+G + Y  LK E GVHR+
Sbjct: 130 SIWAGDLVRMYSRYAESQRWAVKLVSESLADMGGFKEAILEIQGDSVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P   D +E++I   D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPVTEAGGRVHTSTATVAIMP-EVDEVEVQIDPKDLEISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +N+ +A  +LRAKLYE++L++++E   +    ++++G G 
Sbjct: 249 DLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLREQQE--AVSSMRRSQVGTGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R   +  S    L+GD+D+ +++ ++  +
Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLG-QNFSLVGALEGDIDEIIQSCISRDQ 352


>gi|332827204|gb|EGJ99978.1| hypothetical protein HMPREF9455_03672 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 318

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 131/315 (41%), Positives = 196/315 (62%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+  + L   I   +E++    +  +  +   E        + +         VE  + +
Sbjct: 1   MKIIRGLKGWIEGYEEVKGAAEELQLAFDFQKEGVTSEEEVDAAYENAV--KLVENLELK 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  E D   A L+V++GAGGTE QDWA+ML RMY RW + R +KT      DG+EAGI
Sbjct: 59  NMLRREEDKLGAVLKVNSGAGGTEGQDWASMLFRMYQRWCDARGYKTTITHWQDGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ATL ++G  AYG+LK E GVHRLVR+SPY++  +R TSF+S++V P+VDD+IEIE+++
Sbjct: 119 KTATLQVEGEYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVYVVPLVDDTIEIEVNQ 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAW 277
           SD   DT+R+SGAGGQ+VN  ++ VR+ +            +V++  + RSQ  NK  A 
Sbjct: 179 SDITWDTFRSSGAGGQNVNKVETGVRLHYKYKDPETGEEKEIVIENTESRSQFGNKDNAI 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
            +L+++LYE+EL++R    +  E+ K +I WG QIRSYV    + VKD RTN + ++ + 
Sbjct: 239 RLLKSQLYEMELERRSREQSKIEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSNVNA 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DGDLDDF+KA L 
Sbjct: 298 VMDGDLDDFIKAYLM 312


>gi|241206502|ref|YP_002977598.1| peptide chain release factor 1 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240860392|gb|ACS58059.1| peptide chain release factor 1 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 359

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 112/344 (32%), Positives = 175/344 (50%), Gaps = 18/344 (5%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   +  +    P           L  E   L   ++ I+  +  + +   L  L 
Sbjct: 11  ELERRFGEIEARMSAGPA----ADVYVKLASEYSELQPVVTKIRVYEKAVAELADLETLL 66

Query: 77  LEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            +      ++E ++       E      +  Q   L    AD   A LE+ AG GG+E+ 
Sbjct: 67  EDRSVDREMRELAELELPEVKEQIEVLEQEMQILLLPKDAADEKSAILEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A ++ +K E L   +GE  G K     I G   +  LK E GVHR+ 
Sbjct: 127 LFAGDLFRMYERFAAEKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + I+IEI   D RIDT R+SGAGGQHVNTTDSAVR
Sbjct: 187 RVPETEAGGRIHTSAATVAVLP-EAEEIDIEIRAEDIRIDTMRSSGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+P+G+VV    E+SQH+N+A+A  +LR++LY+ E Q+    +      K+++G G  
Sbjct: 246 ITHLPSGIVVTSS-EKSQHQNRAKAMQVLRSRLYDAERQR--ADSERSADRKSQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       +++G++++ + A +A
Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVDALMA 345


>gi|306818471|ref|ZP_07452194.1| peptide chain release factor RF1 [Mobiluncus mulieris ATCC 35239]
 gi|304648644|gb|EFM45946.1| peptide chain release factor RF1 [Mobiluncus mulieris ATCC 35239]
          Length = 366

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 106/347 (30%), Positives = 169/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++  + +  +  DP L  +   A+ + R    L    +  +   +   D     E+
Sbjct: 11  VEPLLEEYAAVEREMSDPDLHSDQSRARRVGRRYAELGRVAAAARAFLEAQDDLEAGREM 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E+ D +                  +          D+ D  +E+ AG GG ES  +A 
Sbjct: 71  AAEDPDFAAELPKLQEAFYTVQAALIEIL--TPRDPDDARDVIMEIKAGEGGEESALFAG 128

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVH 188
            L+RMY  +AEK  +  + L + + +  G+K A +              +  LK E GVH
Sbjct: 129 DLMRMYQHYAEKMGWAVQILGLTESDLGGVKDAQIAFKAKGNPTPEEGVWAHLKYEGGVH 188

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V P  +++ +IEI  +D RID YR+SG GGQ VNTTDS
Sbjct: 189 RVQRVPVTESQGRIHTSAAGVLVMPEAEETGDIEIDPNDLRIDVYRSSGPGGQSVNTTDS 248

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307
           AVRITHIPTG+VV  Q E+SQ +NK     +LR++L +LE +KRE  A    +S+   + 
Sbjct: 249 AVRITHIPTGIVVSMQNEKSQLQNKEAGMRVLRSRLMQLEQEKREAEAAEARASQVRTVD 308

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +IR+Y   P   + D RT  +  +   VL+G+L   +++ +   
Sbjct: 309 RSERIRTYNF-PENRIADHRTGYKAYNLDAVLNGELAPVIQSAIDAD 354


>gi|116254019|ref|YP_769857.1| peptide chain release factor 1 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|119361588|sp|Q1MBB2|RF1_RHIL3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|115258667|emb|CAK09771.1| putative peptide chain release factor 1 [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 359

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 178/344 (51%), Gaps = 18/344 (5%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
              +R   +  +    P           L  E   L   ++ I+  +  + +   L  L 
Sbjct: 11  ELERRFGEIEARMSAGPA----ADVYVKLASEYSELQPVVTKIRVYEKAVTELADLETLL 66

Query: 77  LEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            +      +++ ++       ++I+   +  Q   L    AD   A LE+ AG GG+E+ 
Sbjct: 67  EDRSVDREMRDLAELELPEVKEQIEALEQEMQILLLPKDAADEKSAILEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY R+A ++ +K E L   +GE  G K     I G   +  LK E GVHR+ 
Sbjct: 127 LFAGDLFRMYERFAAEKGWKVEVLSASEGEAGGYKEIIATITGKGVFAKLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + I+IEI   D RIDT R+SGAGGQHVNTTDSAVR
Sbjct: 187 RVPETEAGGRIHTSAATVAVLP-EAEEIDIEIRAEDIRIDTMRSSGAGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+P+G+VV    E+SQH+N+A+A  +LR++LY+ E Q+    +      K+++G G  
Sbjct: 246 ITHLPSGIVVTSS-EKSQHQNRAKAMQVLRSRLYDAERQR--ADSERSADRKSQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       +++G++++ + A +A
Sbjct: 303 SERIRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVDALMA 345


>gi|218249952|ref|YP_002374604.1| peptide chain release factor 2 [Borrelia burgdorferi ZS7]
 gi|223889107|ref|ZP_03623696.1| peptide chain release factor 2 [Borrelia burgdorferi 64b]
 gi|224533928|ref|ZP_03674513.1| peptide chain release factor 2 [Borrelia burgdorferi CA-11.2a]
 gi|226322014|ref|ZP_03797539.1| peptide chain release factor 2 [Borrelia burgdorferi Bol26]
 gi|218165140|gb|ACK75201.1| peptide chain release factor 2 [Borrelia burgdorferi ZS7]
 gi|223885356|gb|EEF56457.1| peptide chain release factor 2 [Borrelia burgdorferi 64b]
 gi|224512931|gb|EEF83297.1| peptide chain release factor 2 [Borrelia burgdorferi CA-11.2a]
 gi|226232604|gb|EEH31358.1| peptide chain release factor 2 [Borrelia burgdorferi Bol26]
          Length = 282

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 138/280 (49%), Positives = 189/280 (67%), Gaps = 1/280 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +    ++             ++ + +     S    E D+N+A+L +H+GAGGTE+ DW 
Sbjct: 1   MCEIAENEKDTSGLEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGGTEACDWV 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+HRL+RIS
Sbjct: 61  AMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRIS 119

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+D+  +RHTSF+S++V PV+DD IEI I   D RIDTYRASGAGGQHVN T SAVRITH
Sbjct: 120 PFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITH 179

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           I TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     + +K EI WG QIRS
Sbjct: 180 IETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGNQIRS 239

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           YV QPY +VKD RT  E ++ + V+DG++D+F++  L  K
Sbjct: 240 YVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 279


>gi|124024426|ref|YP_001018733.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964712|gb|ABM79468.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT
           9303]
          Length = 319

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 141/308 (45%), Positives = 196/308 (63%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           MR+   +   +  IK  +  + D    LEL   E D  +L E    LQ+++  ++  + E
Sbjct: 1   MRQLDEVKAQLVQIKLWRSAVNDAQATLELYDLEPDDEMLSEAQSGLQQLRQGLDRWELE 60

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSGE D   A L ++AGAGGT++QDWA MLLRMYTRWAE    +    E+ +GEEAGI
Sbjct: 61  RLLSGEYDKKGAVLSINAGAGGTDAQDWAQMLLRMYTRWAEDHDMRVTVDELSEGEEAGI 120

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           KSAT+ I+G  AYG+L+ E+G HRLVRISP+++N +R TSF+ + + P +D  +E++I E
Sbjct: 121 KSATVEIEGRYAYGYLRNEKGTHRLVRISPFNANGKRQTSFAGVEIMPKIDQEVELDIPE 180

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D  + T R+ GAGGQ+VN  ++AVRI HIPTG+ V+C QERSQ +NK +A  +L+AKL 
Sbjct: 181 KDLEVTTSRSGGAGGQNVNKVETAVRILHIPTGLAVRCTQERSQLQNKEKALALLKAKLM 240

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
            +  ++R            E  WG QIR+YV  PYQMVKDLRT  E T    V++G+LD 
Sbjct: 241 VIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQMVKDLRTAEETTDVQAVMNGELDR 300

Query: 346 FMKATLAI 353
           F++  L  
Sbjct: 301 FIQTLLRQ 308


>gi|218440653|ref|YP_002378982.1| peptide chain release factor 1 [Cyanothece sp. PCC 7424]
 gi|226739098|sp|B7KI17|RF1_CYAP7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|218173381|gb|ACK72114.1| peptide chain release factor 1 [Cyanothece sp. PCC 7424]
          Length = 370

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 177/348 (50%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q    L  +  DP +  N  E + + + R  L+  ++  +  Q    +     ++
Sbjct: 10  LKSVEQTYKELTRRLADPDIATNPDELQRVAKARSSLEETVNTYETWQKTKEEITGARQI 69

Query: 76  ALEEDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E    S ++E       +  ++++      +   L     D  +  LE+ AG GG E+
Sbjct: 70  LKEAGGDSEMREMAALEVEELEEQLEQLENKLKVLLLPRDPNDDKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY+R+AE + +  + +     +  G K A L IKG   Y  LK E GVHR+
Sbjct: 130 SIWAGDLVRMYSRYAESQNWVVKLVSESLADMGGFKEAILEIKGDQVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P   D +E++I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPVTEAGGRVHTSTATVAIMP-EVDEVEVQIDPKDIEVSTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +N+ +A  +LRAKLYE++L++++E   +    ++++G G 
Sbjct: 249 DLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLREQQE--AVSSMRRSQVGTGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R   +  S    L+GD++  +++ +   +
Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLG-QNFSLVGALEGDIEVIIQSCIGKDQ 352


>gi|195941813|ref|ZP_03087195.1| peptide chain release factor 2 [Borrelia burgdorferi 80a]
          Length = 282

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 138/280 (49%), Positives = 189/280 (67%), Gaps = 1/280 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +    ++             ++ + +     S    E D+N+A+L +H+GAGGTE+ DW 
Sbjct: 1   MCEIAENEKDTNGLEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGGTEACDWV 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+HRL+RIS
Sbjct: 61  AMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRIS 119

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+D+  +RHTSF+S++V PV+DD IEI I   D RIDTYRASGAGGQHVN T SAVRITH
Sbjct: 120 PFDAAKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITH 179

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           I TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     + +K EI WG QIRS
Sbjct: 180 IETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGNQIRS 239

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           YV QPY +VKD RT  E ++ + V+DG++D+F++  L  K
Sbjct: 240 YVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 279


>gi|254431314|ref|ZP_05045017.1| peptide chain release factor 1 [Cyanobium sp. PCC 7001]
 gi|197625767|gb|EDY38326.1| peptide chain release factor 1 [Cyanobium sp. PCC 7001]
          Length = 365

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 106/348 (30%), Positives = 166/348 (47%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + A +    L  +  DP +  N  + + + RER  L+  +   +++Q  L +      L
Sbjct: 10  LEAARRTFETLERQLADPAVASNPDQLQAIARERARLEPLVLDQRQLQKLLAEEADARTL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ-----FESLLSGEADSNDAYLEVHAGAGGTES 130
             +      ++E +    +   E  +          L     D     LE+ AGAGG E+
Sbjct: 70  LRDHRGDRAMEELASEELKQLAERIHSLRTSLTIALLPRDPRDERSVMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+A+   ++ E +   + E  G K   L I+G   +  LK E GVHR+
Sbjct: 130 AIWAGDLARMYERYAQSVGWRVEPVSASEAELGGYKELILSIRGEGVFSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +E++I   D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADPVEVQIEPGDVEISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H P+G+ V C QERSQ +N+ +A  +LRAKLY  E Q  E  A    +   ++G G 
Sbjct: 249 DLLHKPSGIRVFCTQERSQMQNRERAMEILRAKLY--ERQLAEANARERSARLAQVGSGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R     +    VL+G L D + A +A  +
Sbjct: 307 RSEKIRTYNYKD-NRATDHRLGRNFS-LEPVLNGQLQDVIGACIAADQ 352


>gi|154252199|ref|YP_001413023.1| peptide chain release factor 1 [Parvibaculum lavamentivorans DS-1]
 gi|171769599|sp|A7HTY3|RF1_PARL1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|154156149|gb|ABS63366.1| peptide chain release factor 1 [Parvibaculum lavamentivorans DS-1]
          Length = 355

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 113/349 (32%), Positives = 171/349 (48%), Gaps = 20/349 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQN--VIEAKMLMRERQHLDNAISFIKEI---QDRLCDNL 70
             + + R   + ++        +        L +E   L+   + I  +   +    D  
Sbjct: 7   LQSVIARFEAVQSEMN-----SDVPRDRFVALSKEFSELEPVAAAIGHLLARRREYADAE 61

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            LL +    +         +            Q   L    AD  +  LEV AG GG E+
Sbjct: 62  QLLRVRDMAEMAKEEIARLNEELPRLEH--EVQLMLLPKDAADDRNVILEVRAGTGGDEA 119

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A  + +K E +   +GE  G K     I GP  Y  LK E GVHR+
Sbjct: 120 ALFAGDLFRMYERYASNQGWKVELIAASEGEMGGYKEIIAGISGPGVYAKLKFESGVHRV 179

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +   R HTS +++ V P   + +++EI + D RID YRASGAGGQHVN T+SAV
Sbjct: 180 QRVPVTEGGGRIHTSAATVAVLP-EAEEVDVEIEDKDLRIDVYRASGAGGQHVNKTESAV 238

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VV  Q E+SQHKNKA+A  +LRA++++ E ++ +   +     K ++G G 
Sbjct: 239 RITHLPTGIVVAQQDEKSQHKNKARAMQILRARIFDAERERLDRERSAA--RKGQVGSGD 296

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       VL+G+ L + + A +A  +
Sbjct: 297 RSERIRTYNF-PQSRVTDHRINLTLHKLDQVLEGEALGELIDALIAEDQ 344


>gi|283455530|ref|YP_003360094.1| peptide chain release factor 1 [Bifidobacterium dentium Bd1]
 gi|283102164|gb|ADB09270.1| prfA Bacterial Peptide Chain Release Factor 1 (RF-1)
           [Bifidobacterium dentium Bd1]
          Length = 340

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 106/336 (31%), Positives = 162/336 (48%), Gaps = 16/336 (4%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P +  +  + + L R    L   +S     +    D     E+A E+ D +   +  
Sbjct: 1   MAEPEVASDPDKMRKLGRRHAELGAIVSAYTAYKQTKDDLEAAKEMASEDPDFAEEAKRL 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           +N      E        +     D+ D  +E+ AG GG E+  +A  LLRMY R+AEKR 
Sbjct: 61  ENELPEIEEKLRTAL--IPRDPDDARDTIMEIKAGTGGEEAALFAGDLLRMYMRYAEKRG 118

Query: 150 FKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           +       +  E  G+K   L I            +  LK E GVHR+ RI   +S  R 
Sbjct: 119 WAVTLQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLKYEGGVHRVQRIPVTESQGRI 178

Query: 203 HTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
            TS + + V+P   +D  EI+I   D +ID + +SG GGQ VNTT SAVR+THIPTG+VV
Sbjct: 179 QTSAAGVIVFPEADEDDDEIDIDPKDLKIDIFMSSGPGGQSVNTTYSAVRMTHIPTGIVV 238

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQ 318
             Q E+SQ +N+A A  +L+++L  L ++  EE A   +   +++       +IR+Y   
Sbjct: 239 SMQDEKSQIQNRASALRVLKSRL--LAMKHEEEAAQAADMRHSQVRSLDRSERIRTYNF- 295

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           P   + D RTN +  +   VLDGDL   + + +   
Sbjct: 296 PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 331


>gi|150024963|ref|YP_001295789.1| peptide chain release factor 2 [Flavobacterium psychrophilum
           JIP02/86]
 gi|149771504|emb|CAL42973.1| Peptide chain release factor 2 (RF-2) [Flavobacterium psychrophilum
           JIP02/86]
          Length = 293

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 135/286 (47%), Positives = 199/286 (69%), Gaps = 2/286 (0%)

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            +  +  +   E +      +           +E  + +++LS E D+  A L++ AGAG
Sbjct: 3   DELQLAYDFYKEGELSEQELDQQYEATNT--HIEGIELKNMLSDEGDALSAVLQITAGAG 60

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           GTES DWA ML+RMY  WA+ + +K + L    G+ AGIK+ TL I+G  ++G+LKGE G
Sbjct: 61  GTESCDWAEMLMRMYIMWAQNQGYKIKELNFQKGDAAGIKTVTLEIEGDYSFGYLKGENG 120

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHRLVRISP+DSN++RHTSF+S++VYP+VDD+IEIEI+ +D  I T R+SGAGGQ+VN  
Sbjct: 121 VHRLVRISPFDSNAKRHTSFASVYVYPLVDDTIEIEINPADIEIITARSSGAGGQNVNKV 180

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           ++ V++TH PTG+ +QC + RSQH N+ +A  MLR++LYE+EL+K++E  N  E+ K +I
Sbjct: 181 ETKVQLTHKPTGIQIQCSETRSQHDNRNRAMQMLRSQLYEIELKKQQEQRNDIEAGKMKI 240

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
            WG QIR+YV+QPY++VKD+RT  E +    V++G++D F+KA L 
Sbjct: 241 EWGSQIRNYVMQPYKLVKDVRTGHETSDVDSVMNGNIDAFLKAYLM 286


>gi|289549312|ref|YP_003474300.1| peptide chain release factor 1 [Thermocrinis albus DSM 14484]
 gi|289182929|gb|ADC90173.1| peptide chain release factor 1 [Thermocrinis albus DSM 14484]
          Length = 359

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 111/338 (32%), Positives = 177/338 (52%), Gaps = 4/338 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + A +R   L  +  DP + ++ ++   + +E + L+      +E +  L +     EL
Sbjct: 10  LNLAEKRYLQLQAEVLDPDIVKDRLKFAQISKELKELEELHRLHQEYRKILKELEETKEL 69

Query: 76  ALEEDDCSILQETS-DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
               +   + +E      + ++   +  +   L   E DS +  LE+ AG GG E+  +A
Sbjct: 70  LKNPELEPLAKEEIKRLEKELESTEKRIKIHLLPKDERDSKNVILEIRAGVGGEEAALFA 129

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LL MY R+AE++ +K   L        G K    L++G  AY  LK E GVHR+ R+ 
Sbjct: 130 RDLLHMYQRYAEEKGWKFSILSAQKTGLGGYKEVIALVEGEGAYSRLKYESGVHRVQRVP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P  D++    I   D +I+T+RAS AGGQ+VNTT++AVRITH
Sbjct: 190 VTEAGGRIHTSTATVAVLPEADETEV-HIDPKDLKIETFRASSAGGQYVNTTETAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGWGRQIR 313
           +PTG+VV CQ ERSQ++N+ +A  +L A+L +  + QKREE+A              +IR
Sbjct: 249 LPTGIVVTCQDERSQYQNRMKALKILYARLKDFYDRQKREELAKEKREQIGTGERSEKIR 308

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +Y       V D R N+      DVL+G LD+ + A +
Sbjct: 309 TYNFI-QNRVTDHRINLTIYRLQDVLEGKLDEIIDALI 345


>gi|254995073|ref|ZP_05277263.1| peptide chain release factor 1 [Anaplasma marginale str.
           Mississippi]
          Length = 359

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 125/349 (35%), Positives = 183/349 (52%), Gaps = 14/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   ++   L  +  DP     V    +  RE   L   +S ++E Q    +   L  L
Sbjct: 7   LEGLCEKFRILKQQLSDPESLG-VQAFVVASREYSDLLPIMSLVEEYQTAQKEIEELEGL 65

Query: 76  ALEEDDCSILQETSDNLQRIK-----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
               D  + L   +      K           Q   L   + DS  A LE+ AG GG E+
Sbjct: 66  INSTDTDAELVHLAKEELYTKQKLIPKLKHQLQLSLLPKDKDDSRSAILEIRAGTGGEEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +   L RMY ++AE++ +K E + I      G K A+L I G + +  LK E GVHR+
Sbjct: 126 ALFVCDLYRMYIKYAERKSWKVEPIGISTTGIGGYKEASLCIGGKDVFARLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S+ R HTS +++ V P   + ++++I E D RID YR+SG GGQ VNTTDSAV
Sbjct: 186 QRVPETESSGRLHTSAATVAVLP-EVEEVDLKIDEKDLRIDVYRSSGPGGQSVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG+VV  Q E+SQHKNK++A  +LRA+LY LE QK E+   I +  K++IG G 
Sbjct: 245 RITHIPTGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKIEDE--ISKMRKSQIGSGD 302

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
              +IR+Y       + D R N+       ++ +GDLD+F+ A +A  +
Sbjct: 303 RSERIRTYNFL-QSRITDHRINMTLYRLEHIMKEGDLDEFVDALIADDQ 350


>gi|86570230|gb|ABD04787.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodopseudomonas
           palustris HaA2]
          Length = 373

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 106/349 (30%), Positives = 172/349 (49%), Gaps = 16/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72
            D  +   + L  +        +      + RE   L+  +      +E++D L D   L
Sbjct: 21  LDVLLAHHASLEAQLLGEVAAND---YVRITRELSELNPLVEAVKAYREVRDELGDIDDL 77

Query: 73  LELALEEDDCSILQETSDN--LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           LE    + +   + E   +      +  ++  +   L     D  +  LE+ AG GG E+
Sbjct: 78  LEDPATDPEMRAMAEAERDALDAHREDLIQQIRVALLPKDAMDERNVMLEIRAGTGGDEA 137

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY ++A  + +  E +   +G   G K     +KG  A+  LK E GVHR+
Sbjct: 138 SLFAGDLFRMYEKFAALQGWSVEVISASEGTVGGFKEIIAEVKGRGAFAKLKFESGVHRV 197

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++++I   D +IDT RA GAGGQHVN T+SA+
Sbjct: 198 QRVPDTETQGRIHTSAATVAVLP-EVEEVDVDIKPDDLKIDTMRAQGAGGQHVNKTESAI 256

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VV  Q  RSQHKN+A A N+LR+++Y+ E Q+ +  +      K ++G G 
Sbjct: 257 RITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAEQQRID--SARSAERKQKVGSGD 314

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V+ G+ L + + A     +
Sbjct: 315 RSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGEALGELIDALTTEHQ 362


>gi|269958696|ref|YP_003328483.1| peptide chain release factor 1 [Anaplasma centrale str. Israel]
 gi|269848525|gb|ACZ49169.1| peptide chain release factor 1 [Anaplasma centrale str. Israel]
          Length = 359

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 125/349 (35%), Positives = 183/349 (52%), Gaps = 14/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   ++   L  +  DP     V    +  RE   L   +S ++E Q    +   L  L
Sbjct: 7   LEGLCEKFRILKQQLSDPESLG-VQAFVVASREYSDLLPIMSLVEEYQTAQKEIEELEGL 65

Query: 76  ALEEDDCSILQETSDNLQRIK-----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
               D  + L   +      K           Q   L   + DS  A LE+ AG GG E+
Sbjct: 66  INSTDTDAELVHLAREELYTKQKLIPKLKHQLQLSLLPKDKDDSRSAILEIRAGTGGEEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +   L RMY ++AE++ +K E + I      G K A+L I G + +  LK E GVHR+
Sbjct: 126 ALFVCDLYRMYIKYAERKSWKVEPIGISTTGIGGYKEASLCIGGKDVFARLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S+ R HTS +++ V P   + ++++I E D RID YR+SG GGQ VNTTDSAV
Sbjct: 186 QRVPETESSGRLHTSAATVAVLP-EVEEVDLKIDEKDLRIDVYRSSGPGGQSVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG+VV  Q E+SQHKNK++A  +LRA+LY LE QK E+   I +  K++IG G 
Sbjct: 245 RITHIPTGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKIEDE--ISKMRKSQIGSGD 302

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
              +IR+Y       + D R N+       ++ +GDLD+F+ A +A  +
Sbjct: 303 RSERIRTYNFL-QSRITDHRINMTLYRLEHIMKEGDLDEFVDALIADDQ 350


>gi|297181089|gb|ADI17288.1| protein chain release factor a [uncultured alpha proteobacterium
           HF0070_17D04]
          Length = 359

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 120/348 (34%), Positives = 180/348 (51%), Gaps = 14/348 (4%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D  + R   + ++  D        E   L RE   L      I  ++    D    + LA
Sbjct: 8   DKVLARRDEVESRLADAASMS-PDELASLSRELFELRPVCEQIDLVRRLEGDRDAAVMLA 66

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQ-----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
            E  D + + E +    +       ++        L     DS +A LEV AG GG E+ 
Sbjct: 67  EEAADDAEMAEMAQAEIQEIEARLPEEMNSLQLLLLPRDRDDSRNAILEVRAGTGGDEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A+ L  MY R+A K  ++ E +E+ +    G K AT  I G + +  LK E GVHR+ 
Sbjct: 127 LFASDLFGMYQRFAAKHGWRFEVMEVSETGIGGYKEATANIAGSDVFARLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + ++I++ ESD RID +RASG GGQ VNTTDSAVR
Sbjct: 187 RVPETEAGGRIHTSAATVAVLP-EAEDVDIDVQESDLRIDVFRASGPGGQSVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG++V  Q E+SQHKN+A+A  +LRA+LY+ E  + +       S K ++G G  
Sbjct: 246 ITHIPTGIMVSQQDEKSQHKNRAKAMKILRARLYDAERARLQAER--AASRKGQVGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
             +IR+Y   P   V D R N+       V+ G+ LD+ ++A +A  +
Sbjct: 304 SERIRTYNF-PQGRVTDHRINLTLYKLDKVIAGEALDEVVEALVAEDQ 350


>gi|260435474|ref|ZP_05789444.1| peptide chain release factor 1 [Synechococcus sp. WH 8109]
 gi|260413348|gb|EEX06644.1| peptide chain release factor 1 [Synechococcus sp. WH 8109]
          Length = 365

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 101/348 (29%), Positives = 169/348 (48%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + A      L  +  DP +  +    + + RER  L+  +   +E+Q    +     +L
Sbjct: 10  LETATASFRNLERQLADPDVAADPKRLESIARERSRLEPLVLDFEELQRLESERDSARQL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130
             +    + ++E + +      E      E L          D     LE+ AGAGG E+
Sbjct: 70  LKDSRGDAAMEELAQDELASLQEQHATLTERLTLALLPRDPRDERSVMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+++K  +  +++   + +  G +   L ++G + Y  LK E GVHR+
Sbjct: 130 CLWAGDLARMYERYSQKVGWAVQSMSCTEADLGGFRELILSVRGESVYSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D++E+++   D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADAVEVQLDPKDLDISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C QERSQ +N+ +A  +LRAKL  LE ++           + ++G G 
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERALEILRAKL--LEREQAAAAERESSDRRAQVGSGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R     T    VL+G L+D + A +A ++
Sbjct: 307 RSEKIRTYNYKD-NRTTDHRLGRNFT-LEPVLEGQLEDLIGACIAEEQ 352


>gi|297180848|gb|ADI17053.1| protein chain release factor a [uncultured alpha proteobacterium
           HF0010_30A23]
          Length = 358

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 122/351 (34%), Positives = 183/351 (52%), Gaps = 20/351 (5%)

Query: 16  WDNAVQRLSFLNTKTED---PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
            +  V+R   +     D   P           L RE   ++  +  ++  Q  + D    
Sbjct: 8   LETVVRRHEEIQALLADHPEPGSAD----YTKLTREYAEMNPIVEEMRAFQKSVQDLEDA 63

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGT 128
             LA  EDD  +     D  + ++ E++  +           EADS +A LE+  G GG 
Sbjct: 64  RALAASEDDADMRAMAEDEARELQAEIDATEQRMKVLLLPRDEADSRNAILEIRPGTGGD 123

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  LL MY R+AE + +K E LE+ + +  G+K  +  I G N +  LK E GVH
Sbjct: 124 EAGLFAGDLLAMYRRYAELQGWKFEILEMSENDVGGLKEVSAKINGTNVFAALKFESGVH 183

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS +++ V P   + ++IEI   D RIDT RASGAGGQHVNTTDS
Sbjct: 184 RVQRVPMTESGGRIHTSAATVAVLP-EAEDVDIEIKAEDIRIDTMRASGAGGQHVNTTDS 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG++V  Q ++SQH+N+ +A  +LRA+LYE   +  E  A    + K ++G 
Sbjct: 243 AVRITHLPTGIIVT-QSQKSQHRNREEAMRVLRARLYEKARE--EANAERAANRKGQVGS 299

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           G    +IR+Y   P   V D R N+       ++ GD L + ++A  A  +
Sbjct: 300 GDRSERIRTYNY-PQGRVSDHRINLTLHKLDRIVAGDGLGEVIEALTAEDQ 349


>gi|167752837|ref|ZP_02424964.1| hypothetical protein ALIPUT_01098 [Alistipes putredinis DSM 17216]
 gi|167659906|gb|EDS04036.1| hypothetical protein ALIPUT_01098 [Alistipes putredinis DSM 17216]
          Length = 315

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 118/311 (37%), Positives = 184/311 (59%), Gaps = 11/311 (3%)

Query: 50  QHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS 109
             +   +     +   + D  ++ E   E        +        ++  E  +  ++L 
Sbjct: 2   AGIKAWVEEYDAVVKEVEDLRLMPEFVKEGVVTEQELDEQYARAMHRI--EELELRNMLR 59

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            + D   A +++++GAGGTE+ DWA MLLRMYTRW E   +K + L+   GEE G+KS T
Sbjct: 60  RDEDRMGAIMDINSGAGGTEALDWAGMLLRMYTRWGEAHGYKVKVLDYQAGEEVGVKSCT 119

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           L  +G  AYG+LK E GVHR+VR+SP+++N++R T+F+S++V P +DD+IEI ++ +D  
Sbjct: 120 LEFEGEYAYGYLKSENGVHRMVRLSPFNANNKRQTTFASVFVSPAIDDTIEITVNPADIE 179

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAWNMLR 281
            DT+R+SGAGGQ+VN  ++AVR+ +         P   +++  + RSQ  N+  A  +L+
Sbjct: 180 WDTFRSSGAGGQNVNKVETAVRLRYHGKDADTGEPIEYLIENMETRSQLMNRENAMRILK 239

Query: 282 AKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           +KLY+ EL KR       E++K  I WG QIRSYV    + VKD RT ++ +    V+DG
Sbjct: 240 SKLYQRELDKRMATQQALEATKKRIEWGSQIRSYVFDD-RRVKDHRTGVQTSDVEGVMDG 298

Query: 342 DLDDFMKATLA 352
           DLD+F+KA L 
Sbjct: 299 DLDEFIKAYLM 309


>gi|256370594|ref|YP_003108419.1| peptide chain release factor 1 [Candidatus Sulcia muelleri SMDSEM]
 gi|256009386|gb|ACU52746.1| peptide chain release factor 1 [Candidatus Sulcia muelleri SMDSEM]
          Length = 348

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 107/336 (31%), Positives = 177/336 (52%), Gaps = 7/336 (2%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
            + L+     P + +N  +  +L +E + L   I++   ++    +   +  L  ++ + 
Sbjct: 17  FNSLSKLISTPEIIKNYKKYILLSKEYKFLYKIINYYNNLKKNKTNIKEIENLLKKDSEL 76

Query: 83  SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
             L         ++ +    + E+LL  + + N   +E+ AG GG E+  +   + RMYT
Sbjct: 77  LELAFLEKKNLFLEKKKILNKIENLLKKK-NYNKILMELRAGTGGDEACIFVEDIFRMYT 135

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
            + ++  +K + L +  G   G K   L I+G N Y  LK E GVHR+ RI   +S  R 
Sbjct: 136 LYFKELGWKYDILNMQQGSIKGYKEIILEIEGKNVYDKLKFESGVHRVQRIPYTESQGRL 195

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
           HTS  ++ V P       I+I  SD + +T++ASGAGGQHVN T+SA+R+THIPTG+V +
Sbjct: 196 HTSAITVAVIPENYYKNNIKIVLSDLKRETFKASGAGGQHVNKTESAIRLTHIPTGIVAE 255

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQP 319
           CQ+ERSQHKN  +A  +LRA++Y  E +K+ E+  + +  K+ I  G +   IR+Y   P
Sbjct: 256 CQEERSQHKNYEKAIKVLRARIYNSEFKKKNEL--LSKKRKSLISTGERSEKIRTYNY-P 312

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              V D R N         ++G L++ + A   ++K
Sbjct: 313 QGRVTDHRINKSIYYLDHFMNGKLNEMITALQILEK 348


>gi|227875209|ref|ZP_03993351.1| peptide chain release factor 1 [Mobiluncus mulieris ATCC 35243]
 gi|269978100|ref|ZP_06185050.1| peptide chain release factor 1 [Mobiluncus mulieris 28-1]
 gi|307700819|ref|ZP_07637844.1| peptide chain release factor 1 [Mobiluncus mulieris FB024-16]
 gi|227844114|gb|EEJ54281.1| peptide chain release factor 1 [Mobiluncus mulieris ATCC 35243]
 gi|269933609|gb|EEZ90193.1| peptide chain release factor 1 [Mobiluncus mulieris 28-1]
 gi|307613814|gb|EFN93058.1| peptide chain release factor 1 [Mobiluncus mulieris FB024-16]
          Length = 366

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 105/347 (30%), Positives = 169/347 (48%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++  + +  +  DP L  +   A+ + R    L    +  +   +   D     E+
Sbjct: 11  VEPLLEEYAAVEREMSDPDLHSDQSRARRVGRRYAELGRVAAAARAFLEAQDDLEAGREM 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E+ D +                  +          D+ D  +E+ AG GG ES  +A 
Sbjct: 71  AAEDPDFAAELPKLQEAFDTVQAALIEIL--TPRDPDDARDVIMEIKAGEGGEESALFAG 128

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVH 188
            L+RMY  +AEK  +  + L + + +  G+K A +              +  LK E GVH
Sbjct: 129 DLMRMYQHYAEKMGWAVQILGLTESDLGGVKDAQIAFKAKGNPTPEEGVWAHLKYEGGVH 188

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V P  +++ +IEI  +D RID YR+SG GGQ VNTTDS
Sbjct: 189 RVQRVPVTESQGRIHTSAAGVLVMPEAEETGDIEIDPNDLRIDVYRSSGPGGQSVNTTDS 248

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307
           AVRITH+PTG+VV  Q E+SQ +NK     +LR++L +LE +KRE  A    +S+   + 
Sbjct: 249 AVRITHLPTGIVVSMQNEKSQLQNKEAGMRVLRSRLMQLEQEKREAEAAEARASQVRTVD 308

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +IR+Y   P   + D RT  +  +   VL+G+L   +++ +   
Sbjct: 309 RSERIRTYNF-PENRIADHRTGYKAYNLDAVLNGELAPVIQSAIDAD 354


>gi|167629003|ref|YP_001679502.1| peptide chain release factor 1 [Heliobacterium modesticaldum Ice1]
 gi|238687991|sp|B0TI71|RF1_HELMI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|167591743|gb|ABZ83491.1| peptide chain release factor 1 [Heliobacterium modesticaldum Ice1]
          Length = 354

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 103/329 (31%), Positives = 172/329 (52%), Gaps = 10/329 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72
            +   Q+   L     DP + Q+    +   +++  +   +   +  +     + D   +
Sbjct: 5   LEIIEQKYDELTQLLSDPEIIQDQTRWQRHAKQQAGMTEIVDTFRAYKGVLQGIDDARAM 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L  +  E       E  + L R +   +  +   L     D  +  +E+ AG GG E+  
Sbjct: 65  LAESDPELQEMASLELDELLARKEELEQRLKVLLLPKDPNDDKNVIIEIRAGTGGEEAAL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+A+++ ++TE L  +  +  G K   +LI+G  A+  LK E GVHR+ R
Sbjct: 125 FAGDLYRMYSRFADRQGWRTELLSANYTDIGGFKEVIVLIEGQGAFSKLKFESGVHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S+ R HTS +++ V P   + +EIE++ ++ RID + +SGAGGQHVN T+SAVRI
Sbjct: 185 VPATESSGRIHTSAATVAVLP-EAEEVEIEVNPNELRIDVFCSSGAGGQHVNKTESAVRI 243

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV CQ E+SQ KN+ +A  +LRA+L  LE  + E+   +  + K+ +G G   
Sbjct: 244 THLPTGIVVSCQDEKSQLKNREKAMRVLRARL--LEKAREEQHGEMASARKSMVGSGDRS 301

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
            +IR+Y   P   V D R  +       +
Sbjct: 302 ERIRTYNF-PQGRVTDHRIGLTLHRLETI 329


>gi|87198313|ref|YP_495570.1| peptide chain release factor 1 [Novosphingobium aromaticivorans DSM
           12444]
 gi|119361571|sp|Q2GBN7|RF1_NOVAD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|87133994|gb|ABD24736.1| bacterial peptide chain release factor 1 (bRF-1) [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 354

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 110/344 (31%), Positives = 173/344 (50%), Gaps = 10/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R + L  +     L     +     R+   L+      +E+++   + + L  L
Sbjct: 8   LAQIAARFAELEARLASGTL--EGADFIAASRDYAELEPVARVAEEVREMRGELVSLAAL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
              +      +E +     +           L    AD+  A LE+ AG GG E+  +A 
Sbjct: 66  DDPDMRELADEELARIRAELPEAEHRLAVAMLPRDSADARPAMLEIRAGTGGDEAALFAA 125

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L RMY R+A ++ ++ E + ++  +  G K     + G   +  LK E GVHR+ R+  
Sbjct: 126 DLFRMYERYAAEQGWRVETISVNANDLGGYKEVVANVAGQGVFAKLKFESGVHRVQRVPV 185

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS +++ V P   D +++ I + D +ID YRASGAGGQHVNTTDSAVRITH+
Sbjct: 186 TESGGRIHTSAATVAVLP-EPDEVDVAIEDKDLKIDIYRASGAGGQHVNTTDSAVRITHL 244

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQI 312
           P+G+VV CQ ERSQHKNKA+A  +LR +LY+  +++        E+ K  +G G    +I
Sbjct: 245 PSGLVVTCQDERSQHKNKAKAMQVLRTRLYD--MRREAAQGAEAEARKAMVGSGDRSERI 302

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIKK 355
           R+Y   P   V D R N+      ++L+G  L + + A +A  +
Sbjct: 303 RTYNF-PQGRVTDHRINLTLHRLPEILEGPGLAELIDALIAEDQ 345


>gi|225552175|ref|ZP_03773115.1| peptide chain release factor 2 [Borrelia sp. SV1]
 gi|225371173|gb|EEH00603.1| peptide chain release factor 2 [Borrelia sp. SV1]
          Length = 282

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 138/280 (49%), Positives = 190/280 (67%), Gaps = 1/280 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +    ++             ++ + +     S    E D+N+A+L +H+GAGGTE+ DW 
Sbjct: 1   MCEIAENEKDTSGLEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGGTEACDWV 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            ML RMY+R+AE++K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+HRL+RIS
Sbjct: 61  AMLYRMYSRYAERKKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRIS 119

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+D++ +RHTSF+S++V PV+DD IEI I   D RIDTYRASGAGGQHVN T SAVRITH
Sbjct: 120 PFDADKKRHTSFASVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITH 179

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           I TG+V Q Q +RSQHKNK  A  +L+++LYE    K +E     + +K EI WG QIRS
Sbjct: 180 IETGIVTQSQSDRSQHKNKDLAMKVLKSRLYEYYKNKEDEKNKSKQDTKKEISWGNQIRS 239

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           YV QPY +VKD RT  E ++ + V+DG++D+F++  L  K
Sbjct: 240 YVFQPYNLVKDHRTKFENSNTTSVMDGNIDNFIEEYLKWK 279


>gi|58584615|ref|YP_198188.1| peptide chain release factor 1 [Wolbachia endosymbiont strain TRS
           of Brugia malayi]
 gi|75497913|sp|Q5GSS8|RF1_WOLTR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|58418931|gb|AAW70946.1| Protein chain release factor A [Wolbachia endosymbiont strain TRS
           of Brugia malayi]
          Length = 359

 Score =  200 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 124/348 (35%), Positives = 191/348 (54%), Gaps = 15/348 (4%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           +  +  ++ +++  K E+P       E   L +E   L   I  I E      + L L E
Sbjct: 6   NLQDLKRKFNYIERKLENPTNLS-QKEFINLSKEYSELRPIIKIINEYDTLKKEILDLEE 64

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESL------LSGEADSNDAYLEVHAGAGGT 128
           +  +E+    ++E +      K +V   Q ++          E DS +A LE+ AG GG 
Sbjct: 65  IIKDENSEYDIKELAKEEFFEKQKVLLPQVKAKLKLALLPKDEDDSRNAILEIRAGTGGE 124

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A ML RMY ++AE+R +K E + I      G K A+ LI G   +  LK E GVH
Sbjct: 125 EAALFAAMLFRMYQKYAERRNWKFEPISISSTGIGGYKEASALINGTEVFARLKFESGVH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S+ R HTS +++ + P   + ++ +I E D RID YR+SG GGQ VNTTDS
Sbjct: 185 RVQRVPETESSGRLHTSAATVAILP-EVEEVDFKIEEKDLRIDVYRSSGPGGQSVNTTDS 243

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+TH+PT +VV  Q E+SQHKNKA+A  +LRA+LYE+E QK+E         K++IG 
Sbjct: 244 AVRVTHLPTEMVVIQQDEKSQHKNKAKALKVLRARLYEIERQKKE--IERSTMRKSQIGS 301

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           G    +IR+Y   P   + D R N+       ++ +G+LD+F++  ++
Sbjct: 302 GDRSERIRTYNF-PQSRITDHRINLTSHQLEQIIKEGELDEFIEVLIS 348


>gi|172040385|ref|YP_001800099.1| peptide chain release factor 1 [Corynebacterium urealyticum DSM
           7109]
 gi|171851689|emb|CAQ04665.1| peptide chain release factor RF-1 [Corynebacterium urealyticum DSM
           7109]
          Length = 371

 Score =  200 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 113/345 (32%), Positives = 178/345 (51%), Gaps = 9/345 (2%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D+ +     L  +  DP L  +   A+ + +  Q L   I   + +     D+    E+ 
Sbjct: 22  DDILSEYQGLEAQLADPELHNDPKAARRVGKRFQELQPVIQTYERLNTAREDHEAAAEM- 80

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
              +D    +E +     I+   E            + +D  +E+ +GAGG E+  +A  
Sbjct: 81  -ASEDAEFAEEATRLEAEIEELQEKLTDLLAPRDPKNGDDIIMEIKSGAGGEEAALFAGE 139

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-----YGWLKGEQGVHRLV 191
           L RMY R+AE+  F TE L +++ +  G+K  T+ I+         +   K E GVHR+ 
Sbjct: 140 LARMYQRYAERHGFATEVLGLNETDLGGVKDMTMSIRSKQPSRDGAWADFKFEGGVHRVQ 199

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R  TS + + VYP  D+  ++EI E D R+D YR+SG GGQ VNTTDSAVR
Sbjct: 200 RVPVTESQGRIQTSAAGVLVYPEPDEVEDVEIDEKDIRVDVYRSSGKGGQGVNTTDSAVR 259

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGR 310
           ITH+PTGVVV CQ+ERSQ +N+A+A  +L A+L +++ ++ E  A  G +++   +    
Sbjct: 260 ITHLPTGVVVTCQKERSQIQNRARAMQVLAARLQQMKEEEAEAEAAEGRAAQIRTMDRSE 319

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R   +  +   VLDGDL+    A    ++
Sbjct: 320 RIRTYNF-PESRVSDHRIGYKANNLDSVLDGDLESLFAALKEAER 363


>gi|302869596|ref|YP_003838233.1| peptide chain release factor 1 [Micromonospora aurantiaca ATCC
           27029]
 gi|315503942|ref|YP_004082829.1| peptide chain release factor 1 [Micromonospora sp. L5]
 gi|302572455|gb|ADL48657.1| peptide chain release factor 1 [Micromonospora aurantiaca ATCC
           27029]
 gi|315410561|gb|ADU08678.1| peptide chain release factor 1 [Micromonospora sp. L5]
          Length = 362

 Score =  200 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 109/350 (31%), Positives = 170/350 (48%), Gaps = 16/350 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               +   + L  +  DP +  +   A+ + R    L        E++    D     EL
Sbjct: 6   LAALLDEYAELERRLADPAIHADQGTARRVGRRYAELVPLHKAAGELEQARADLAAAREL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E+   ++  +T         E   +    +     D+ D  +E+ AG GG ES  +A 
Sbjct: 66  AAEDATFAVEADTIAASLPALEERLAELL--IPRDPHDAKDVIVEIKAGEGGEESALFAG 123

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVH 188
            LLRMYTR+AE+  + TE ++  D +  G+K  +L IK           +  LK E GVH
Sbjct: 124 DLLRMYTRYAERHGWVTEVIDAQDSDLGGVKDVSLAIKSKGVPEGGNGVWSRLKWEGGVH 183

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V P   + +++ I  ++ RID +R+SG GGQ VNTTDS
Sbjct: 184 RVQRVPVTESQGRIHTSAAGVLVLP-EAEDVDVTIDPNELRIDVFRSSGPGGQSVNTTDS 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE--- 305
           AVRITH+PTG+VV CQ E+SQ +N+ QA  +LRA+L  L   + +  A   ++ K +   
Sbjct: 243 AVRITHVPTGIVVSCQNEKSQLQNREQAMRILRARL--LAAAQEQADAAASDARKAQVRT 300

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +    +IR+Y   P   + D R      +    L G+LD  + A     +
Sbjct: 301 VDRSERIRTYNF-PQNRITDHRIGYTAYNLDLALAGELDGVLDALAEADR 349


>gi|224131216|ref|XP_002321029.1| predicted protein [Populus trichocarpa]
 gi|222861802|gb|EEE99344.1| predicted protein [Populus trichocarpa]
          Length = 416

 Score =  200 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 181/345 (52%), Gaps = 17/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72
            ++A +    L+ K  DP +  N  E + L +    LD  +S  K  +     L D   L
Sbjct: 58  LESAEKTWKELSVKLGDPDVVSNPSEYQKLAQSVAELDEVVSIFKRFKDCEKMLEDTRAL 117

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQF--ESLLSGEADSNDAYLEVHAGAGGTES 130
            +    ++D + +          +L+   ++     L S   D+ +  LEV AG GG E+
Sbjct: 118 AKEDGNDEDMAEMIAYEIESLSSELKQLEEKLTVLLLPSDPLDARNILLEVRAGTGGDEA 177

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY R++E+  +K   +   + E+ G K+  + +KG + Y  LK E GVHR+
Sbjct: 178 GLWAGDLVRMYQRYSEQNSWKVSVISSSEAEKGGYKTYVMEVKGKSVYSKLKYESGVHRV 237

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P   D +E+ I   +  + T R+ GAGGQ+VN  ++AV
Sbjct: 238 QRVPQTEAQGRVHTSTATVAIMP-EVDEVEVVIDPKEYELTTARSGGAGGQNVNKVETAV 296

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ER+Q +N+ +A  +LRAKLYE+++++++E  +I    K ++G G 
Sbjct: 297 DLIHKPTGIRIFCTEERTQLQNRNRALQLLRAKLYEIKVREQQE--SIRNQRKMQVGTGA 354

Query: 310 --RQIRSYVLQPYQMVKDLR--TNIEKTSPSDVLDGDLDDFMKAT 350
              +IR+Y  +    V D R   N E T     L GD+++ ++A 
Sbjct: 355 RAEKIRTYNYKD-NRVTDHRLKVNFELT---SFLAGDIENAVQAC 395


>gi|320528629|ref|ZP_08029782.1| peptide chain release factor 1 [Solobacterium moorei F0204]
 gi|320130995|gb|EFW23572.1| peptide chain release factor 1 [Solobacterium moorei F0204]
          Length = 358

 Score =  200 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 168/345 (48%), Gaps = 10/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK---EIQDRLCDNLIL 72
                ++   +  K  D  +  +      L +E+  L   +       E+  R+     +
Sbjct: 8   LSEIEKQYKEIVEKLMDEKVMSDPKLLTKLSKEQARLTQPVEAYHQLLELDSRIAQADEM 67

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L+    E       E  +     ++ +E  Q   +     D +D  +E+  GAGG E   
Sbjct: 68  LKENDPELKEMARMEKDECEPEREVLLERIQHLLVPRDPDDDHDVIMEIRGGAGGDEGNI 127

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AE + +K + LE    E  G       +KG + Y  LK E GVHR+ R
Sbjct: 128 FAGDLYRMYSKYAESKGWKVQVLEASVSEAGGYTQIIFSVKGTDVYKELKFESGVHRVQR 187

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++   P  +D+    I   D  I+T+RASGAGGQH+N TDSAVRI
Sbjct: 188 VPKTETQGRIHTSTATVLCQPEAEDTDIE-IDPKDLTIETHRASGAGGQHINKTDSAVRI 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
            H+PTG+ V CQ  RSQ +N+  A  ++RA++Y  E  KR +    G+  + +IG G   
Sbjct: 247 VHVPTGITVNCQDGRSQIENRETAMRLIRARVY--EELKRIQEEEAGKIRRAKIGTGDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +IR+Y   P   V D R ++  T    +++G LD  ++  LA +
Sbjct: 305 EKIRTYNY-PQNRVTDHRISLTITQLDRIMEGKLDGVIEGLLAEE 348


>gi|162138527|ref|YP_483698.2| peptide chain release factor 1 [Rhodopseudomonas palustris HaA2]
 gi|119361590|sp|Q2J423|RF1_RHOP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 361

 Score =  200 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 106/349 (30%), Positives = 172/349 (49%), Gaps = 16/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72
            D  +   + L  +        +      + RE   L+  +      +E++D L D   L
Sbjct: 9   LDVLLAHHASLEAQLLGEVAAND---YVRITRELSELNPLVEAVKAYREVRDELGDIDDL 65

Query: 73  LELALEEDDCSILQETSDN--LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           LE    + +   + E   +      +  ++  +   L     D  +  LE+ AG GG E+
Sbjct: 66  LEDPATDPEMRAMAEAERDALDAHREDLIQQIRVALLPKDAMDERNVMLEIRAGTGGDEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY ++A  + +  E +   +G   G K     +KG  A+  LK E GVHR+
Sbjct: 126 SLFAGDLFRMYEKFAALQGWSVEVISASEGTVGGFKEIIAEVKGRGAFAKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++++I   D +IDT RA GAGGQHVN T+SA+
Sbjct: 186 QRVPDTETQGRIHTSAATVAVLP-EVEEVDVDIKPDDLKIDTMRAQGAGGQHVNKTESAI 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VV  Q  RSQHKN+A A N+LR+++Y+ E Q+ +  +      K ++G G 
Sbjct: 245 RITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAEQQRID--SARSAERKQKVGSGD 302

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V+ G+ L + + A     +
Sbjct: 303 RSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGEALGELIDALTTEHQ 350


>gi|242050470|ref|XP_002462979.1| hypothetical protein SORBIDRAFT_02g035755 [Sorghum bicolor]
 gi|241926356|gb|EER99500.1| hypothetical protein SORBIDRAFT_02g035755 [Sorghum bicolor]
          Length = 363

 Score =  200 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 120/337 (35%), Positives = 198/337 (58%), Gaps = 4/337 (1%)

Query: 1   MKLS-RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
           ++L+  ++N +      +   + ++ L  K+ D  LW +  +A+ ++     + + +  +
Sbjct: 27  VELALERVNEVRQSAGLEQLEEDIASLEKKSADSSLWDDPSKAQEILVSLTEVKDRVKLL 86

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSGEADSNDA 117
            + + ++ +   +++L  E D          +         ++  +   LLSG  D   A
Sbjct: 87  NDFKLQVEEAETIVKLTEELDSIDTGLLEEASKIIKALNKALDNFEMTQLLSGPYDKEGA 146

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            + + AGAGGT++QDWA+MLLRMY RW EK+++KT  +E   GEEAGIKSAT+ ++G  A
Sbjct: 147 VINISAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSATVELEGRYA 206

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRAS 236
           YG++ GE+G HR+VR SP+++   R TSF+ + V P+  ++S+ ++I E D  I   RA 
Sbjct: 207 YGYISGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESMAVDIPEEDLDISFTRAG 266

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ+VN  ++AVR+ HIPTG+ V+C +ERSQ  NK +A N L+AKL  +  ++R    
Sbjct: 267 GKGGQNVNKVETAVRMVHIPTGIAVRCSEERSQLANKIKALNRLKAKLLVIAEEQRASEI 326

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
                   +  WG+QIR+YV  PY++VKD+RT  E +
Sbjct: 327 KQIRGDMVKAEWGQQIRNYVFHPYKLVKDVRTGCETS 363


>gi|313678884|ref|YP_004056624.1| peptide chain release factor 1 [Mycoplasma bovis PG45]
 gi|312950243|gb|ADR24838.1| peptide chain release factor 1 [Mycoplasma bovis PG45]
          Length = 358

 Score =  200 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 108/343 (31%), Positives = 171/343 (49%), Gaps = 5/343 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                Q    L  K +DP +  N+ E   + +E   +          ++ L D      +
Sbjct: 9   LSEIKQSYLELLKKVDDPAVINNIKEYSAINKEIAKIREISEKFITYENLLKDVEQAKLM 68

Query: 76  ---ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
                +E+         +N  +++   E  +   L   E D  +  +E+   AGG E+  
Sbjct: 69  LESKSDEEVEFAKMIIDENSLKLEELEEKLKILILPQDENDDKNIIVEIRGAAGGDEANI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY ++A++  F+ + L  +     G       IKG  AY   K E GVHR+ R
Sbjct: 129 FAGDLFRMYNKFADELGFRLKILSTNSANAGGFSQIVFSIKGEKAYSKFKFESGVHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ V P +DD+++IEI  SD +ID +R+SGAGGQ VNTTDSAVRI
Sbjct: 189 VPVTESQGRIHTSTTTVTVMPEIDDTVDIEIKPSDLKIDVFRSSGAGGQSVNTTDSAVRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH+PT +VV  Q ERSQ  N+  A  +L++KLY+LE+QK+ +  +             +I
Sbjct: 249 THLPTNIVVTSQDERSQIANRETALTILKSKLYDLEMQKKADEESGYRKLAGHGDRSEKI 308

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R+Y   P   V D R +   +    +++G L   ++A LA ++
Sbjct: 309 RTYNY-PQDRVTDHRISFSTS-LKPIMEGKLTPIVEALLAEEQ 349


>gi|322379189|ref|ZP_08053581.1| peptide chain release factor 1 [Helicobacter suis HS1]
 gi|322379995|ref|ZP_08054263.1| peptide chain release factor 1 [Helicobacter suis HS5]
 gi|321147584|gb|EFX42216.1| peptide chain release factor 1 [Helicobacter suis HS5]
 gi|321148391|gb|EFX42899.1| peptide chain release factor 1 [Helicobacter suis HS1]
          Length = 352

 Score =  200 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 109/345 (31%), Positives = 173/345 (50%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               V R   L      P +  +V     L +E+  L+      K     L        L
Sbjct: 6   LKEVVARYDALALCLTQPEVLNDVKRLTELSKEQASLEELAQAAKRYLKILDQIQENKAL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E   +L+     +    +   +     DS + YLE+ AG GG E+  + 
Sbjct: 66  LEDKELGELAKEELKSLEEQSKNLGDHIKILLIPKDPNDSKNIYLELRAGTGGDEAGIFV 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L R Y R+A+ +++K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 126 GDLFRTYCRYADLKRWKVEIVSSSENSVGGYKEMIALIKGQGVYSRLKFEAGTHRVQRVP 185

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P   D +EI I+ SD RI+ +RA G GGQ VNTTDSAVRITH
Sbjct: 186 ETESQGRIHTSAITVAIMP-EADDVEININPSDLRIEVFRAGGHGGQCVNTTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+ V  Q E+SQHKN+ +A  +L+A+LYE +++++++        K ++G G    +
Sbjct: 245 IPTGISVSMQDEKSQHKNRDKALKILKARLYEKQIEEQQQ--AHSAERKMQVGSGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+   S  +++  G+LD  ++  +A  +
Sbjct: 303 IRTYNY-PQNRLSDHRINLTLYSLEELMLSGNLDPVIEPLIAHAQ 346


>gi|85375680|ref|YP_459742.1| peptide chain release factor 1 [Erythrobacter litoralis HTCC2594]
 gi|122543160|sp|Q2N5U6|RF1_ERYLH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|84788763|gb|ABC64945.1| protein chain release factor A [Erythrobacter litoralis HTCC2594]
          Length = 355

 Score =  200 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 113/344 (32%), Positives = 173/344 (50%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R + L  +     L     E     R+   L+       E++    +   L E+
Sbjct: 8   LDQIANRFAELEARMASGTL--EGEEFVQASRDYAELEPVAKVAAEVKAMREEIGGLEEM 65

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +  ++ QE    ++     +        L    AD+  A LE+ AG GG E+  +A
Sbjct: 66  LADPEMKAMAQEELAAIREALPEKERQLAIAMLPKDSADNKPAMLEIRAGTGGDEAALFA 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+A ++ +K E + ++  E  G K     + G   +  LK E GVHR+ R+ 
Sbjct: 126 GDLYRMYERFAGEQGWKVEPVSMNASEVGGFKEIVANVSGTGVFAKLKFESGVHRVQRVP 185

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   D ++++I + D +ID YRASGAGGQHVNTTDSAVRITH
Sbjct: 186 ETESGGRIHTSAATVAVLP-EPDEVDVQIDDKDLKIDIYRASGAGGQHVNTTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VVQ Q ERSQHKNKA+A  +LR +LY+   ++ +       + K  +G G    +
Sbjct: 245 LPTGIVVQQQDERSQHKNKAKAMQVLRTRLYDHLREQSQGE--EAAARKAMVGSGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIK 354
           IR+Y   P   V D R  +      +++ G  L + + A +A  
Sbjct: 303 IRTYNF-PQGRVTDHRIGLTLHKLDEIIAGPGLGELVGALIAED 345


>gi|75674575|ref|YP_316996.1| peptide chain release factor 1 [Nitrobacter winogradskyi Nb-255]
 gi|119361570|sp|Q3SVP7|RF1_NITWN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|74419445|gb|ABA03644.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrobacter
           winogradskyi Nb-255]
          Length = 358

 Score =  200 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 104/349 (29%), Positives = 170/349 (48%), Gaps = 16/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R + L ++        +      + RE   L+  +  +K  +    +   +  +
Sbjct: 7   LDLLLARHAALESELLS---HVSADRYVQMTRELAELNPIVDAVKNWRAVTAEIAGIDAM 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  ++  +        +  + +          D  +  LEV AG GG E+
Sbjct: 64  IADPATDAEMRAMAEAERPALEARNDELMQKIRVALLPKDAMDERNVMLEVRAGTGGDEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A  + +K E +   +G   G K     ++G  AY  +K E GVHR+
Sbjct: 124 SLFAGDLFRMYERFAALQGWKVEVISASEGTMGGYKEIVAQVQGRGAYARMKFESGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++++I   D RI+T RA GAGGQHVN T+SA+
Sbjct: 184 QRVPDTEAQGRVHTSAATVAVLP-EAEEVDVDIRPDDLRIETMRAQGAGGQHVNKTESAI 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG+VV  Q  RSQHKN+A A N+LR+++Y+ E Q+    A      K ++G G 
Sbjct: 243 RITHIPTGIVVSMQDSRSQHKNRASAMNILRSRIYDAERQRIN--AARSADRKDQVGSGD 300

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V+ GD L + + A     +
Sbjct: 301 RSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGDALHELIDALTTEHQ 348


>gi|148272337|ref|YP_001221898.1| peptide chain release factor 1 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|166223547|sp|A5CQ48|RF1_CLAM3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|147830267|emb|CAN01201.1| peptide chain release factor RF-1 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 359

 Score =  200 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 106/346 (30%), Positives = 168/346 (48%), Gaps = 14/346 (4%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             ++    L  +  DP L  +   ++ + R    L   ++   E      D     ELA 
Sbjct: 7   QLLEEHEELQQQLGDPELHADASRSRKVNRRYAELSRIVAAHAEWTQLGDDLAAARELAE 66

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           E+   +      +         E  +   +     D+ D  +E+  G GG ES  +A  L
Sbjct: 67  EDPAFADEIPGLEQALD--AAQEKLRRLLIPRDPDDARDVIMEIKMGEGGAESALFAADL 124

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA------YGWLKGEQGVHRLV 191
           LRMY  +AE R++KTE L     +  G K   + IKG +       +  LK E GVHR+ 
Sbjct: 125 LRMYLHYAESRRWKTEVLSQTQSDLGGYKDVQVAIKGTSDDPALGVWAHLKYEGGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS + + V P V++  E+ I  +D +ID YR+SG GGQ VNTTDSAVR
Sbjct: 185 RVPATESQGRIHTSAAGVLVIPEVEEVEEVAIDPNDLKIDVYRSSGPGGQSVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GW 308
           ITH+PTG+VV  Q E+SQ +N+     +LRA++   + ++ +  A+     +++I     
Sbjct: 245 ITHLPTGIVVAMQNEKSQLQNREAGMRVLRARVLAKQQEEIDAEASAV--RRSQIRTMDR 302

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +IR+Y   P   + D RT  +  +   V+DG LD  +++ +   
Sbjct: 303 SERIRTYNF-PENRIADHRTGYKAYNLDAVMDGALDPVVESCIQAD 347


>gi|16331171|ref|NP_441899.1| peptide chain release factor 2 [Synechocystis sp. PCC 6803]
 gi|1653665|dbj|BAA18577.1| peptide chain release factor [Synechocystis sp. PCC 6803]
          Length = 288

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 136/281 (48%), Positives = 195/281 (69%), Gaps = 1/281 (0%)

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +EL   EDD ++L E    L++++ E++  + + LLSG  D+  A L ++AGAGGT++QD
Sbjct: 1   MELLELEDDQALLTEAETTLEQLQKELDRWELQQLLSGPYDAKGATLTINAGAGGTDAQD 60

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA MLLRMYTRW+EK+ +K    EI +G+EAG+KS TL I+G  AYG+LK E+G HRLVR
Sbjct: 61  WAEMLLRMYTRWSEKQGYKVHLAEISEGDEAGLKSVTLEIEGRYAYGYLKSEKGTHRLVR 120

Query: 193 ISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           ISP+++N +R TSF+ + V P+  +++I ++I + D  I T RA G GGQ+VN  ++AVR
Sbjct: 121 ISPFNANGKRQTSFAGVEVMPLLGEEAISLDIPDKDLDISTSRAGGKGGQNVNKVETAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           I H+PTG+ V+C QERSQ +NK +A  +L+AKL  +  ++R +          E  WG Q
Sbjct: 181 IVHLPTGLAVRCTQERSQLQNKEKALAILKAKLLIVLEEQRAQAIAEIRGDMVEAAWGTQ 240

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+YV  PYQ+VKDLRTN+E T    V+DG+L DF++A L 
Sbjct: 241 IRNYVFHPYQLVKDLRTNVETTDVGGVMDGELSDFIEAYLR 281


>gi|227495018|ref|ZP_03925334.1| peptide chain release factor 1 [Actinomyces coleocanis DSM 15436]
 gi|226831470|gb|EEH63853.1| peptide chain release factor 1 [Actinomyces coleocanis DSM 15436]
          Length = 369

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 109/345 (31%), Positives = 175/345 (50%), Gaps = 12/345 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            ++  + +     DP +  +  + + L +    L    +    +     D     E+A  
Sbjct: 14  LLEEYAQVEASLADPEVLADRTQQRKLAKRFSELSVIKNAADALSMAADDLEAAKEMAK- 72

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
            +D S   E  +    ++          +    AD+++  LE+ AG GG ES  +A  L 
Sbjct: 73  -EDSSFAAEIPEMEVALEAAHARLVKILIPRDPADADNVILEIKAGEGGEESALFAAELA 131

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLV 191
           RMYTR+AE + +K + L        G+K  +L I            +  LK E GVHR+ 
Sbjct: 132 RMYTRYAETKGWKVKELSSTYTGLGGVKEVSLSIAAKSDVAPEDGVWAHLKFEGGVHRVQ 191

Query: 192 RISPYDSNSRRHTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
           R+   +S  R HTS   + V P   DD+ ++ I ++D RID +R+SG GGQ VNTTDSAV
Sbjct: 192 RVPVTESQGRIHTSAVGVLVTPEVEDDTEDLVIDQNDLRIDVFRSSGPGGQSVNTTDSAV 251

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITHIPTGVVV  Q E+SQ +NK  A  +LR++L +LE +K+E  A+   +S+   +   
Sbjct: 252 RITHIPTGVVVSMQNEKSQLQNKEAAMRVLRSRLIQLEREKKEAEASAMRASQVRTVDRS 311

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +IR+Y   P   + D RT  +  + + VL+G+L   +++ + ++
Sbjct: 312 ERIRTYNF-PENRIADHRTGYKAYNLATVLEGELGPVIESAIVLE 355


>gi|157964580|ref|YP_001499404.1| peptide chain release factor 1 [Rickettsia massiliae MTU5]
 gi|166977368|sp|A8F1S1|RF1_RICM5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157844356|gb|ABV84857.1| Peptide chain release factor RF-1 [Rickettsia massiliae MTU5]
          Length = 361

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 123/347 (35%), Positives = 185/347 (53%), Gaps = 16/347 (4%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           +    + +   L  K     +  +  E     +E   L++ ++ IKE      +      
Sbjct: 6   NLAKILDKYENLGNKLSS-GIMGD--EFVKASKEYAELEDVVAKIKEYNKAKSELEEANN 62

Query: 75  LALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LE    +   E  ++                +   L   +ADS  A +EV AG+GG E
Sbjct: 63  FKLEVGLDNATLEMIEDEIHTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGGEE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A +L  MY R+AE + ++ E L I D    G K A+  IKG + +  LK E GVHR
Sbjct: 123 AALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P   + ++I+I + D RIDTYRASGAGGQHVNTTDSA
Sbjct: 183 VQRVPETESQGRIHTSAATVAVLP-EAEEVDIQIEDKDLRIDTYRASGAGGQHVNTTDSA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG+ V  Q E+SQHKNKA+A  +LRA++YE E +  ++     +S + ++G G
Sbjct: 242 VRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERR--KKEQERADSRRGQVGSG 299

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
               +IR+Y   P   V D R N+      +V+ +G LD+F++A +A
Sbjct: 300 DRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345


>gi|216263966|ref|ZP_03435960.1| peptide chain release factor 1 [Borrelia afzelii ACA-1]
 gi|215980010|gb|EEC20832.1| peptide chain release factor 1 [Borrelia afzelii ACA-1]
          Length = 357

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 125/342 (36%), Positives = 196/342 (57%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72
            ++   R+  +  K +D +L +N  +   +++E  +L+   +     + I +++ DN  +
Sbjct: 6   LNSVTSRIKSIEEKLQDINLIKNQKKYSKIIKEYTYLEKINTKKIEYENILNQINDNKTI 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LE   +++   ++++   +L + K       +   L   E DS +  +E+ AG GG E+ 
Sbjct: 66  LEKEEQQEMKELIKQELIDLDKKKENLEHEIKILLLPQDENDSKNIIIEIRAGTGGEEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +AN L  MY +++EK+K+KTE +  ++ E  G K     IKG + +  LK E GVHR+ 
Sbjct: 126 LFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +SN R  TS +++ V P ++++    I+E D RID YR+SGAGGQHVNTTDSAVR
Sbjct: 186 RIPITESNGRLQTSAATVAVLPNIEETEID-INEKDLRIDVYRSSGAGGQHVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++G G  
Sbjct: 245 ITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSNNRKQQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   + D R NI      + + G+LD  +   
Sbjct: 303 SERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDQLLDPL 343


>gi|220906439|ref|YP_002481750.1| peptide chain release factor 1 [Cyanothece sp. PCC 7425]
 gi|254790876|sp|B8HXV0|RF1_CYAP4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219863050|gb|ACL43389.1| peptide chain release factor 1 [Cyanothece sp. PCC 7425]
          Length = 364

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 100/348 (28%), Positives = 173/348 (49%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +       L  +  DP +  +  E + + + R  L+  +      +          ++
Sbjct: 10  LKSVELTFHELTRRLADPEVATDPEEFQRVAKARASLEETVDTYDTWKTVQQHLAEARQI 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130
           A E      LQE +        E         +   L     D  +  LE+ AG GG E+
Sbjct: 70  AREAASDPELQEMAVQEVNELTEKSAHLEQRLKILLLPRDPNDDKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+R+Y+R+AE ++++ + +    GE  G K A L I+G   Y  LK E GVHR+
Sbjct: 130 SIWAGDLVRLYSRYAESQRWRVKLVSESLGEMGGFKEAILEIQGEQVYSKLKYEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +++ R HTS +++ + P   D +E++I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATEASGRVHTSTATVAIMP-EVDEVEVKIDPKDIELTTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +NK +A  +LRAKLYE++LQ+++    I    ++++G G 
Sbjct: 249 DLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMKLQEQQSE--ITSRRRSQVGTGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R   +    + VL+GD++  ++A +   +
Sbjct: 307 RSEKIRTYNYKD-NRATDHRLG-QNFPLNQVLEGDIEGIIQACITQDQ 352


>gi|29348961|ref|NP_812464.1| peptide chain release factor RF-2 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29340868|gb|AAO78658.1| peptide chain release factor RF-2 [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 319

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 122/315 (38%), Positives = 186/315 (59%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+  + L   I    E++    +    L     +++     +      +    VE  + +
Sbjct: 1   MKLVKDLQKWIDGYNEVKTLADELE--LSFDFYKEELVTEGDVDAAYAKASEAVEALELK 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  EAD     L++++GAGGTESQDWA+ML+RMY R+AE   +K     + +G+EAGI
Sbjct: 59  NMLRDEADQMACVLKINSGAGGTESQDWASMLMRMYLRYAETNGYKATIANLQEGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T+ I+G  AYG+LKGE GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+ I  
Sbjct: 119 KTCTINIEGDFAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNILP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAW 277
           +    DT+R+ GAGGQ+VN  +S VR+ +            ++++  + R Q KN+  A 
Sbjct: 179 ACISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNRENAM 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
             LR+ LY+ ELQ R       E+ K +I WG QIRSYV    + VKD RTN + +  + 
Sbjct: 239 RQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNG 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DG +++F+KA L 
Sbjct: 298 VMDGKIEEFIKAYLM 312


>gi|282898327|ref|ZP_06306318.1| Peptide chain release factor 1 [Raphidiopsis brookii D9]
 gi|281196858|gb|EFA71763.1| Peptide chain release factor 1 [Raphidiopsis brookii D9]
          Length = 364

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 99/348 (28%), Positives = 178/348 (51%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q    L  +  DP   ++  E + + + R  L+  ++  +  ++   + +   ++
Sbjct: 10  LKSVEQTFHELTRRLADPDTAKSPDEYQKIAKSRSSLEEVVTAYETWKNSQEELVGARQI 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130
             E +    L E +    +             +   L     D  +  LE+ AG GG E+
Sbjct: 70  LKESNGDPELHEMATIEVKDLESKIEHLEEQLKILLLPRDPNDEKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  LLRMY+R+A+ + +K + +    GE  G K   L I+G + Y  LK E GVHR+
Sbjct: 130 SIWAGDLLRMYSRYADTQGWKVKLVSESPGEMGGFKEVILEIQGNSVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P   D +E+ I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATEAGGRVHTSTATVAIMP-EVDDVEVHIDPKDIEMTTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +NK +A  +LRAKLYE++L++++E   +    ++++G G 
Sbjct: 249 DLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQQE--AVTSMRRSQVGTGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R   +  + S VL+GDL+  +++ ++  +
Sbjct: 307 RSEKIRTYNYKD-SRATDHRLG-QNFTLSPVLEGDLEILIQSCISQDQ 352


>gi|83592089|ref|YP_425841.1| peptide chain release factor 1 [Rhodospirillum rubrum ATCC 11170]
 gi|119361593|sp|Q2RWE1|RF1_RHORT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|83575003|gb|ABC21554.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodospirillum
           rubrum ATCC 11170]
          Length = 354

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 123/346 (35%), Positives = 171/346 (49%), Gaps = 11/346 (3%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           +    V R   L                  + RE   L   +  I  + D   +      
Sbjct: 6   NLSRVVARHDELRALLSTSA--GGGEGFVRMSRELADLAPVVEAIGRLDDAKAELAGARA 63

Query: 75  LALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           L  + D      +E       I       +   L   EAD     LEV AG GG E+  +
Sbjct: 64  LLDDPDMRDLAREEVLRLEAEIPALEHGVKLLLLPRDEADDRGVILEVRAGTGGDEAALF 123

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  LLRMY R+A++R ++ E +E  D +  GIK A+  I G   +  LK E GVHR+ R+
Sbjct: 124 AGDLLRMYERYAQERGWRFEVMEASDTDIGGIKEASAAISGRGVFARLKFESGVHRVQRV 183

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +   R HTS +++ V P   + +++EI E D RIDTYR+ GAGGQHVNTTDSAVRIT
Sbjct: 184 PVTEGGGRIHTSAATVAVLP-EAEEVDVEIEEKDLRIDTYRSQGAGGQHVNTTDSAVRIT 242

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+P+GVV QCQ E+SQHKNKA+A  MLR KLY+   Q         E+ + ++G G    
Sbjct: 243 HLPSGVVAQCQDEKSQHKNKAKAMRMLRTKLYDHARQ--TADDARAEARRVQVGSGDRSE 300

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIKK 355
           +IR+Y   P   V D R  +      +VL G  LD+ ++  +A  +
Sbjct: 301 RIRTYNF-PQGRVTDHRIGLTLHRLPEVLAGTALDEVIEPLIAEDQ 345


>gi|282899982|ref|ZP_06307943.1| Peptide chain release factor 1 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195252|gb|EFA70188.1| Peptide chain release factor 1 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 364

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 177/348 (50%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q    L  +  DP   ++  E + + + R  L+  +   +  ++   + +   ++
Sbjct: 10  LKSVEQTFHELTRRLADPDTAKSPDEYQKIAKSRSSLEEVVIAYETWKNSQEELVGARQI 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130
             E +    L E +    +             +   L     D  +  LE+ AG GG E+
Sbjct: 70  LKESNGDPELHEMATMEVKDLENKIEHLEEQLKILLLPRDPNDEKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  LLRMY+R+A+ + ++ + +    GE  G K   L I+G + Y  LK E GVHR+
Sbjct: 130 SIWAGDLLRMYSRYADTQGWRVKLVSESPGEMGGFKEVILEIQGDSVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P   D +E+ I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATEAGGRVHTSTATVAIMP-EVDDVEVHIDPKDIEMTTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +NK +A  +LRAKLYE++L++++E   +    ++++G G 
Sbjct: 249 DLFHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEIKLREQQE--AVTSMRRSQVGTGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R   +  + S VL+GDL+  +++ ++  +
Sbjct: 307 RSEKIRTYNYKD-SRATDHRLG-QNFTLSPVLEGDLETLIQSCISQDQ 352


>gi|224533030|ref|ZP_03673636.1| peptide chain release factor 2 [Borrelia burgdorferi WI91-23]
 gi|224512024|gb|EEF82419.1| peptide chain release factor 2 [Borrelia burgdorferi WI91-23]
          Length = 269

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 138/267 (51%), Positives = 186/267 (69%), Gaps = 1/267 (0%)

Query: 88  TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
                  ++ + +     S    E D+N+A+L +H+GAGGTE+ DW  ML RMY+R+AE+
Sbjct: 1   MEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGGTEACDWVAMLYRMYSRYAER 60

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           +K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+HRL+RISP+D+  +RHTSF+
Sbjct: 61  KKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRISPFDAAKKRHTSFA 119

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           S++V PV+DD IEI I   D RIDTYRASGAGGQHVN T SAVRITHI TG+V Q Q +R
Sbjct: 120 SVFVDPVIDDKIEITIKPEDIRIDTYRASGAGGQHVNKTSSAVRITHIETGIVTQSQSDR 179

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQHKNK  A  +L+++LYE    K +E     + +K EI WG QIRSYV QPY +VKD R
Sbjct: 180 SQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGNQIRSYVFQPYNLVKDHR 239

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T  E ++ + V+DG++D+F++  L  K
Sbjct: 240 TKFENSNTTSVMDGNIDNFIEEYLKWK 266


>gi|170781877|ref|YP_001710209.1| peptide chain release factor 1 [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|189039963|sp|B0RAQ5|RF1_CLAMS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169156445|emb|CAQ01593.1| peptide chain release factor 1 (RF-1) [Clavibacter michiganensis
           subsp. sepedonicus]
          Length = 359

 Score =  199 bits (506), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 105/346 (30%), Positives = 167/346 (48%), Gaps = 14/346 (4%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
             ++    L  +  DP L  +   ++ + R    L   ++   E      D     ELA 
Sbjct: 7   QLLEEHEELQQQLGDPELHADASRSRKVNRRYAELSRIVAAHAEWTQLGDDLAAARELAE 66

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           E+          +         E  +   +     D+ D  +E+  G GG ES  +A  L
Sbjct: 67  EDPAFVDEIPGLEEQLD--QAQEKLRRLLIPRDPDDARDVIMEIKMGEGGAESALFAADL 124

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA------YGWLKGEQGVHRLV 191
           LRMY  +AE R++KTE L     +  G K   + IKG +       +  LK E GVHR+ 
Sbjct: 125 LRMYLHYAESRRWKTEVLSQTQSDLGGYKDVQVAIKGTSDDPALGVWAHLKYEGGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS + + V P V++  E+ +  +D +ID YR+SG GGQ VNTTDSAVR
Sbjct: 185 RVPATESQGRIHTSAAGVLVIPEVEEVEEVPLDPNDLKIDVYRSSGPGGQSVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GW 308
           ITH+PTG+VV  Q E+SQ +N+     +LRA++   + ++ +  A+     +++I     
Sbjct: 245 ITHLPTGIVVAMQNEKSQLQNREAGMRVLRARVLAKQQEEIDAEASAV--RRSQIRTMDR 302

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +IR+Y   P   + D RT  +  +   V+DG LD  +++ +   
Sbjct: 303 SERIRTYNF-PENRIADHRTGYKAYNLDAVMDGALDPVVESCIQAD 347


>gi|269794320|ref|YP_003313775.1| peptide chain release factor 1 [Sanguibacter keddieii DSM 10542]
 gi|269096505|gb|ACZ20941.1| bacterial peptide chain release factor 1 (bRF-1) [Sanguibacter
           keddieii DSM 10542]
          Length = 361

 Score =  199 bits (506), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 114/343 (33%), Positives = 174/343 (50%), Gaps = 11/343 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +  +   + +  +  DP +  +   A+ L R    L   ++  +  +  + D     ELA
Sbjct: 9   EPLLAEHAEIEQQLADPAVHADAARARTLGRRYAELGQVVAAYRGWRSAVDDAEAAAELA 68

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
            EE   +              E   +    +     D  D  LE+ AG GG ES  +A  
Sbjct: 69  AEEPAFAEELPALQTAATDAAEKLRRVL--IPRDPDDGRDVILEIKAGEGGEESALFAGD 126

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHR 189
           LLRMY R+AE+R +KTE +E  + +  G K   + +            +  LK E GVHR
Sbjct: 127 LLRMYLRYAERRGWKTEVIEATESDLGGYKDVQVAVKAKGTVAPEDGPWANLKYEGGVHR 186

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS + + V+P V+D+ E+EI ++D RID YR+SG GGQ VNTTDSA
Sbjct: 187 VQRVPVTESQGRIHTSAAGVLVFPEVEDAGELEIDQNDLRIDVYRSSGPGGQSVNTTDSA 246

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308
           VRITH+PTG+VV  Q E+SQ +N+ QA  +LRA+L     ++    AN    S+   +  
Sbjct: 247 VRITHVPTGIVVSMQNEKSQLQNREQAMRVLRARLLAARQEEEAAAANDIRRSQVRTVDR 306

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             +IR+Y   P   + D RT  +  +   VLDGDL+  +++ +
Sbjct: 307 SERIRTYNY-PENRIADHRTGYKSYNLDQVLDGDLEPVVRSAI 348


>gi|255010031|ref|ZP_05282157.1| putative peptide chain release factor [Bacteroides fragilis 3_1_12]
          Length = 319

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 124/315 (39%), Positives = 187/315 (59%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+  + L   I    E++    +  +  +     D+    QE  +   +    VE  + +
Sbjct: 1   MKLVKGLQKWIDGYNEVKTLADELELAFDFYK--DELVTEQEVDEAYAKALEHVENLELQ 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  EAD     L++++GAGGTESQDWA+ML+RMY R+AE   +K     + +G+EAGI
Sbjct: 59  NMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYLRYAETNGYKATMANLQEGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T+ I+G  AYG+LKGE GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+ I  
Sbjct: 119 KTCTIQIEGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNILP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAW 277
           +    DT+R+ GAGGQ+VN  +S VR+ +            ++++  + R Q KN+  A 
Sbjct: 179 ACISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNRENAM 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
             LR+ LY+ ELQ R       E+ K +I WG QIRSYV    + VKD RTN + +  + 
Sbjct: 239 RQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNG 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DG ++ F+KA L 
Sbjct: 298 VMDGKIEGFIKAYLM 312


>gi|150008712|ref|YP_001303455.1| peptide chain release factor 1 [Parabacteroides distasonis ATCC
           8503]
 gi|255014510|ref|ZP_05286636.1| peptide chain release factor 1 [Bacteroides sp. 2_1_7]
 gi|256841252|ref|ZP_05546759.1| peptide chain release factor 1 [Parabacteroides sp. D13]
 gi|298375991|ref|ZP_06985947.1| peptide chain release factor 1 [Bacteroides sp. 3_1_19]
 gi|301311522|ref|ZP_07217449.1| peptide chain release factor 1 [Bacteroides sp. 20_3]
 gi|166223582|sp|A6LDR9|RF1_PARD8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|149937136|gb|ABR43833.1| peptide chain release factor 1 [Parabacteroides distasonis ATCC
           8503]
 gi|256737095|gb|EEU50422.1| peptide chain release factor 1 [Parabacteroides sp. D13]
 gi|298267028|gb|EFI08685.1| peptide chain release factor 1 [Bacteroides sp. 3_1_19]
 gi|300830608|gb|EFK61251.1| peptide chain release factor 1 [Bacteroides sp. 20_3]
          Length = 369

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 93/354 (26%), Positives = 159/354 (44%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   + T   DP +  ++     L +E + L+  +    E    L        L
Sbjct: 10  LDGLVSRFEEVGTLITDPAVIADMKRFVKLNKEYRDLEKIVGARSEYVKVLNGIEEAKAL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L      +   +       + +   D  +A +E+  G GG E+ 
Sbjct: 70  LESEQDPEMREMAREELDTCNERIPALEEEIKLLLVPADPQDDKNAIVEIRGGTGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + +K       +G   G K     + G   YG LK E GVHR+ 
Sbjct: 130 LFAGDLYRMYVKYCELKGWKISVSSFSEGSSGGFKEIIFTVSGEKVYGTLKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P  D+     I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 190 RVPATETQGRVHTSAATVAVLPEADEFDVE-INEGEIKWDTFRSGGAGGQNVNKVESGVR 248

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + ++           ++++C + R Q KNK +A   LR+ +Y+ E QK  +  +I    K
Sbjct: 249 LRYVWKNPITGVSEEILIECTETRDQPKNKERALTRLRSFIYDKEHQKYLD--DIASKRK 306

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T +  G +   IR+Y   P   + D R N    + S  +DG++ D +   +  +
Sbjct: 307 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDGEIQDCLDHLIVAE 359


>gi|189025285|ref|YP_001933057.1| peptide chain release factor 1 [Treponema pallidum subsp. pallidum
           SS14]
 gi|238689313|sp|B2S1Z9|RF1_TREPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189017860|gb|ACD70478.1| peptide chain release factor 1 [Treponema pallidum subsp. pallidum
           SS14]
 gi|291059466|gb|ADD72201.1| peptide chain release factor 1 [Treponema pallidum subsp. pallidum
           str. Chicago]
          Length = 351

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 106/342 (30%), Positives = 169/342 (49%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    +   L  + E+P L+ +    +  MR+  +L   +                  L
Sbjct: 5   LEELRAQWRKLQQEVENPSLFSSTQSYRERMRDHAYLSRLMEEYDRYLLTEKQLEDAHVL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQF----ESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +E D          ++ ++  +   Q       +        +  +E+  G GG E+ 
Sbjct: 65  IQDESDADFKDVIRQEIRTLEAALHTSQKRLKTLLIPPDPLQEKNIIMEIRGGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYT +AE ++++ E L + + E  G K  T  I G + YG L+ E GVHR+ 
Sbjct: 125 LFAADLFRMYTHYAESKQWRYEVLAVSETELGGFKEITFSISGRDVYGSLRYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS  ++ V P ++++    I   D R+D  RASG GGQ VNTTDSAVR
Sbjct: 185 RVPSTEASGRIHTSAVTVAVLPEMEETEVD-IRAEDVRVDVMRASGPGGQCVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV CQ E+SQ KNKA+A  +LR+++Y+LE  KR+         K+++G G  
Sbjct: 244 LTHLPTGIVVVCQDEKSQIKNKAKAMRVLRSRVYDLEESKRQ--VARARERKSQVGSGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   V D R  +       V+ G LDD ++  
Sbjct: 302 SERIRTYNF-PQNRVTDHRVRVTLYKLDAVMQGALDDIIEPL 342


>gi|15594541|ref|NP_212330.1| peptide chain release factor 1 [Borrelia burgdorferi B31]
 gi|216264551|ref|ZP_03436543.1| peptide chain release factor 1 [Borrelia burgdorferi 156a]
 gi|218249543|ref|YP_002374724.1| peptide chain release factor 1 [Borrelia burgdorferi ZS7]
 gi|221217544|ref|ZP_03589014.1| peptide chain release factor 1 [Borrelia burgdorferi 72a]
 gi|223889241|ref|ZP_03623829.1| peptide chain release factor 1 [Borrelia burgdorferi 64b]
 gi|224532854|ref|ZP_03673469.1| peptide chain release factor 1 [Borrelia burgdorferi WI91-23]
 gi|224534094|ref|ZP_03674677.1| peptide chain release factor 1 [Borrelia burgdorferi CA-11.2a]
 gi|225549805|ref|ZP_03770769.1| peptide chain release factor 1 [Borrelia burgdorferi 118a]
 gi|226321514|ref|ZP_03797040.1| peptide chain release factor 1 [Borrelia burgdorferi Bol26]
 gi|3914620|sp|O51214|RF1_BORBU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739097|sp|B7J1C9|RF1_BORBZ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|2688096|gb|AAC66592.1| peptide chain release factor 1 (prfA) [Borrelia burgdorferi B31]
 gi|215981024|gb|EEC21831.1| peptide chain release factor 1 [Borrelia burgdorferi 156a]
 gi|218164731|gb|ACK74792.1| peptide chain release factor 1 [Borrelia burgdorferi ZS7]
 gi|221192607|gb|EEE18824.1| peptide chain release factor 1 [Borrelia burgdorferi 72a]
 gi|223885274|gb|EEF56376.1| peptide chain release factor 1 [Borrelia burgdorferi 64b]
 gi|224512243|gb|EEF82629.1| peptide chain release factor 1 [Borrelia burgdorferi WI91-23]
 gi|224512793|gb|EEF83161.1| peptide chain release factor 1 [Borrelia burgdorferi CA-11.2a]
 gi|225369613|gb|EEG99062.1| peptide chain release factor 1 [Borrelia burgdorferi 118a]
 gi|226232703|gb|EEH31456.1| peptide chain release factor 1 [Borrelia burgdorferi Bol26]
 gi|312148526|gb|ADQ31185.1| peptide chain release factor 1 [Borrelia burgdorferi JD1]
          Length = 357

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 123/347 (35%), Positives = 191/347 (55%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++A  ++  +  K +D +L ++  +   +++E  +L+   +   E +  L        +
Sbjct: 6   LNSATSKIKLIEEKLQDINLIKDQKKYSKIIKEYTYLEKINTKKIEYEKILSQINDTKTI 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +ED   + +     L  +  + E  +       L   E DS +  +E+ AG GG E+ 
Sbjct: 66  LEKEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGTGGEEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +AN L  MY +++EK+K+KTE +  ++ E  G K     IKG + +  LK E GVHR+ 
Sbjct: 126 LFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +SN R  TS +++ V P ++++    I+E D RID YR+SGAGGQHVNTTDSAVR
Sbjct: 186 RIPITESNGRLQTSAATVAVLPNIEETEID-INEKDLRIDVYRSSGAGGQHVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++G G  
Sbjct: 245 ITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R NI      + + G+LD  +   +   +
Sbjct: 303 SERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDPLLDPLMIALQ 348


>gi|154248977|ref|YP_001409802.1| peptide chain release factor 1 [Fervidobacterium nodosum Rt17-B1]
 gi|154152913|gb|ABS60145.1| peptide chain release factor 1 [Fervidobacterium nodosum Rt17-B1]
          Length = 347

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 119/332 (35%), Positives = 176/332 (53%), Gaps = 16/332 (4%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + L  +  K  + +L   + E   +  E          I E  + L +  +  +    
Sbjct: 8   VKKTLEEIEKKMME-NL--ELKEMIKISAEFTKFKEIDELINEYFNLLDEKELWEQEPGS 64

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           ED+       +    +I+          L   E    + +LE+ AG GG E+  +A  LL
Sbjct: 65  EDE------IAKLDSKIEKISNEIIALLLPDDEFRDRNVFLEIRAGTGGEEAALFAGDLL 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY R++E+  + TE ++    +  G K   + IKG N+  ++K E+GVHR+ RI   +S
Sbjct: 119 RMYLRYSERMGWSTEIIDESKSDLGGYKEVVVRIKGKNSGTYMKYERGVHRVQRIPVTES 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS +++ V P     +++ I   D RIDTYRASGAGGQ+VN T+SA+RITHIPTG
Sbjct: 179 GGRIHTSTATVAVLP-EMKDVDVYIDPKDIRIDTYRASGAGGQYVNKTESAIRITHIPTG 237

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSY 315
           +VV CQ ERSQH+NK +A  +LRAKLYEL  ++++E   +    K +IG G +   IR+Y
Sbjct: 238 IVVTCQSERSQHQNKEKAMMVLRAKLYELARKEQDE--KLSSQRKNQIGSGERSEKIRTY 295

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
              P   V D R N+   +   VLDGDLD  +
Sbjct: 296 NF-PQNRVTDHRINLTIYNLQAVLDGDLDLII 326


>gi|67459154|ref|YP_246778.1| peptide chain release factor 1 [Rickettsia felis URRWXCal2]
 gi|75536414|sp|Q4ULG0|RF1_RICFE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|67004687|gb|AAY61613.1| Peptide chain release factor RF-1 [Rickettsia felis URRWXCal2]
          Length = 355

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 123/347 (35%), Positives = 185/347 (53%), Gaps = 16/347 (4%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           +    + +   L  K     +  +  E     +E   L++ ++ IKE      +      
Sbjct: 6   NLAKILDKYENLGKKLSS-GIMGD--EFVKASKEYAELEDVVAKIKEYNKAKSELEEANN 62

Query: 75  LALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LE    +   E  ++                +   L   +ADS  A +EV AG+GG E
Sbjct: 63  FKLEVGLDNATLEMIEDEIHTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGGEE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A +L  MY R+AE + ++ E L I D    G K A+  IKG + +  LK E GVHR
Sbjct: 123 AALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P   + ++I+I + D RIDTYRASGAGGQHVNTTDSA
Sbjct: 183 VQRVPETESQGRIHTSAATVAVLP-EAEEVDIKIEDKDLRIDTYRASGAGGQHVNTTDSA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG+ V  Q E+SQHKNKA+A  +LRA++YE E +  ++     +S + ++G G
Sbjct: 242 VRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERR--KKEQERADSRRGQVGSG 299

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
               +IR+Y   P   V D R N+      +V+ +G LD+F++A +A
Sbjct: 300 DRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345


>gi|262383596|ref|ZP_06076732.1| peptide chain release factor 1 [Bacteroides sp. 2_1_33B]
 gi|262294494|gb|EEY82426.1| peptide chain release factor 1 [Bacteroides sp. 2_1_33B]
          Length = 369

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 93/354 (26%), Positives = 159/354 (44%), Gaps = 19/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   + T   DP +  ++     L +E + L+  +    E    L        L
Sbjct: 10  LDGLVSRFEEVGTLITDPAVIADMKRFVKLNKEYRDLEKIVGARSEYVKVLNGIEEAKAL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
              E D  + +   + L      +   +       + +   D  +A +E+  G GG E+ 
Sbjct: 70  LESEQDPEMREMAREELDACNERIPALEEEIKLLLVPADPQDDKNAIVEIRGGTGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY ++ E + +K       +G   G K     + G   YG LK E GVHR+ 
Sbjct: 130 LFAGDLYRMYVKYCELKGWKISVSSFSEGSSGGFKEIIFTVSGEKVYGTLKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P  D+     I+E + + DT+R+ GAGGQ+VN  +S VR
Sbjct: 190 RVPATETQGRVHTSAATVAVLPEADEFDVE-INEGEIKWDTFRSGGAGGQNVNKVESGVR 248

Query: 252 ITHIP--------TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           + ++           ++++C + R Q KNK +A   LR+ +Y+ E QK  +  +I    K
Sbjct: 249 LRYVWKNPITGVSEEILIECTETRDQPKNKERALTRLRSFIYDKEHQKYLD--DIASKRK 306

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T +  G +   IR+Y   P   + D R N    + S  +DG++ D +   +  +
Sbjct: 307 TMVSTGDRSAKIRTYNY-PQGRITDHRINYTIYNLSAFMDGEIQDCLDHLIVAE 359


>gi|226226590|ref|YP_002760696.1| peptide chain release factor 1 [Gemmatimonas aurantiaca T-27]
 gi|226089781|dbj|BAH38226.1| peptide chain release factor 1 [Gemmatimonas aurantiaca T-27]
          Length = 356

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 112/350 (32%), Positives = 177/350 (50%), Gaps = 12/350 (3%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L+ L        A+QR   +     DP   ++      L RE   L   ++    +Q   
Sbjct: 2   LSHLRDRM--AEALQRAIEVEQLLADPETTKDAPRLAELGREHHRLAQVVARATRLQKAE 59

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVE-YKQFESLLSGEAD--SNDAYLEVHA 123
            +     ELA  +D     +  ++ ++  +      K+   LL          A +E+ A
Sbjct: 60  QELNEARELANGDDPDFAAEARTEMVRLEEETAVLEKELLPLLIPRDPLDERPAIVEIRA 119

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G GG E+  +A  LLRMYTR+ E+R ++ E +   +G   G+K +   + G   +G L+ 
Sbjct: 120 GTGGDEAGLFAGDLLRMYTRFLERRGWRIEPISYSEGTLGGVKESVFKVSGDGVFGVLRW 179

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHR+ R+   +S  R HTS +++ V P  ++     I + D RID +R+SG GGQ V
Sbjct: 180 ESGVHRVQRVPATESQGRIHTSAATVAVLPEAEELDMR-IEDKDLRIDVFRSSGPGGQSV 238

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTTDSAVRITHIPTG+VV  Q ++SQ +NKA+A ++LRA+L +L L ++E         K
Sbjct: 239 NTTDSAVRITHIPTGIVVSQQDQKSQLQNKAKAMDVLRARLLDLRLSEQEAER--SRMRK 296

Query: 304 TEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           +++  G +   IR+Y   P   V D R  +       V++G++  F+ A 
Sbjct: 297 SQVSTGDRSAKIRTYNF-PQGRVTDHRVGLTLYDIDSVMNGEISSFLDAL 345


>gi|225159115|ref|ZP_03725422.1| peptide chain release factor 1 [Opitutaceae bacterium TAV2]
 gi|224802321|gb|EEG20586.1| peptide chain release factor 1 [Opitutaceae bacterium TAV2]
          Length = 373

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 109/348 (31%), Positives = 167/348 (47%), Gaps = 12/348 (3%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D     +R   L+ +   P  + +   A  + RE Q +   ++     +  L +      
Sbjct: 6   DISLFQRRADELDAQMRSPTFYNDARAAAAVTREHQQVTQLLADHAAHRKTLAEIAEAQA 65

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFE-----SLLSGEADSNDAYLEVHAGAGGTE 129
           L  +      L+E ++           + F       +     DS D  LE+ AG GG E
Sbjct: 66  LIKDPSADPDLRELAEAELPELEARRERLFRTVLAGMIPPEPTDSRDTVLEIRAGTGGEE 125

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY R+AE R +  E     + E  G +  + +I+G + Y  LK E GVHR
Sbjct: 126 AALFAAELARMYHRYAEDRGWTVEPTGSSESERGGFREVSFIIRGQDVYKQLKFESGVHR 185

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++N R HTS  ++ V P     ++I I   D  I   RASG GGQ VNTTDSA
Sbjct: 186 VQRVPLTEANGRIHTSTVTVAVLP-EAQEVDIRIDPQDLEITVQRASGPGGQGVNTTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRI H PTG++V C   RSQ KNKA A ++LRA+L  L+ ++ EE A      + +IG G
Sbjct: 245 VRIVHKPTGMIVYCADGRSQQKNKASAMSVLRARL--LQRKQDEEAAKYAAQRRGQIGTG 302

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               +IR+Y   P   + D R  +   S + V++G L++ ++     +
Sbjct: 303 DRSERIRTYNF-PQNRLTDHRIGLTLYSLTQVMEGALNEVVQPLQKAE 349


>gi|319428670|gb|ADV56693.1| peptide chain release factor [Phaseolus vulgaris]
          Length = 498

 Score =  199 bits (505), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 104/336 (30%), Positives = 177/336 (52%), Gaps = 17/336 (5%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           K  DP +  +  E + L +    LD  +S  ++ +D          LA +  +   + E 
Sbjct: 138 KLADPDVVSDPKEYQKLAQSVAELDEVVSIYRKFKDCEKHLEEAKALAKDGGNDEDMVEM 197

Query: 89  SD-----NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
                    +++    +  +   L S   D+ +  +EV AG GG E+  WA  L+RMY R
Sbjct: 198 ISFEIDLLSKQLAELEDNLKVLLLPSDPLDARNIMIEVRAGTGGDEAGIWAGDLVRMYER 257

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
           ++E+  +K   +     E+ G K+  + IKG   Y  LK E GVHR+ R+   ++  R H
Sbjct: 258 YSERNSWKYSLVSSSAAEKGGFKTYVMEIKGNRVYSKLKYESGVHRVQRVPLTEAQGRVH 317

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
           TS +++ + P   D +E+ I   D  + T R+ GAGGQ+VN  ++A+ + H PTG+ + C
Sbjct: 318 TSTATVAIMP-EVDEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLVHKPTGIRIFC 376

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320
            +ER+Q KNK +A+ +LRAKLYE++L++++E  ++    K+++G G    +IR+Y  +  
Sbjct: 377 TEERTQLKNKNRAFQLLRAKLYEIKLREQQE--SLRNQRKSQVGTGARAEKIRTYNYKD- 433

Query: 321 QMVKDLR--TNIEKTSPSDVLDGDLDDFMKATLAIK 354
             V D R  TN E T     LDGD++D ++ +   +
Sbjct: 434 NRVTDHRLKTNYELT---SFLDGDIEDAVQISTKSR 466


>gi|111115018|ref|YP_709636.1| peptide chain release factor 1 [Borrelia afzelii PKo]
 gi|119361512|sp|Q0SNW8|RF1_BORAP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|110890292|gb|ABH01460.1| peptide chain release factor 1 [Borrelia afzelii PKo]
          Length = 357

 Score =  199 bits (505), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 126/342 (36%), Positives = 197/342 (57%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72
            ++A  R+  +  K +D +L +N  +   +++E  +L+   +     + I +++ DN  +
Sbjct: 6   LNSATSRIKSIEEKLQDINLIKNQKKYSKIIKEYTYLEKINTKKIEYENILNQINDNKTI 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LE   +++   ++++   +L + K       +   L   E DS +  +E+ AG GG E+ 
Sbjct: 66  LEKEEQQEMKELIKQELIDLDKKKENLEHEIKILLLPQDENDSKNIIIEIRAGTGGEEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +AN L  MY +++EK+K+KTE +  ++ E  G K     IKG + +  LK E GVHR+ 
Sbjct: 126 LFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +SN R  TS +++ V P ++++    I+E D RID YR+SGAGGQHVNTTDSAVR
Sbjct: 186 RIPITESNGRLQTSAATVAVLPNIEETEID-INEKDLRIDVYRSSGAGGQHVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++G G  
Sbjct: 245 ITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSNNRKQQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   + D R NI      + + G+LD  +   
Sbjct: 303 SERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDQLLDPL 343


>gi|216264821|ref|ZP_03436813.1| peptide chain release factor 2 [Borrelia burgdorferi 156a]
 gi|226320754|ref|ZP_03796310.1| peptide chain release factor 2 [Borrelia burgdorferi 29805]
 gi|215981294|gb|EEC22101.1| peptide chain release factor 2 [Borrelia burgdorferi 156a]
 gi|226233809|gb|EEH32534.1| peptide chain release factor 2 [Borrelia burgdorferi 29805]
          Length = 269

 Score =  199 bits (505), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 138/267 (51%), Positives = 186/267 (69%), Gaps = 1/267 (0%)

Query: 88  TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
                  ++ + +     S    E D+N+A+L +H+GAGGTE+ DW  ML RMY+R+AE+
Sbjct: 1   MEIEFNTLEKQYKDLLTISYFKEELDANNAFLTIHSGAGGTEACDWVAMLYRMYSRYAER 60

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           +K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+HRL+RISP+D+  +RHTSF+
Sbjct: 61  KKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRISPFDAAKKRHTSFA 119

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           S++V PV+DD IEI I   D RIDTYRASGAGGQHVN T SAVRITHI TG+V Q Q +R
Sbjct: 120 SVFVDPVIDDKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITHIETGIVTQSQSDR 179

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQHKNK  A  +L+++LYE    K +E     + +K EI WG QIRSYV QPY +VKD R
Sbjct: 180 SQHKNKDLAMKVLKSRLYEYYKSKEDEKNKSKQDTKKEISWGNQIRSYVFQPYNLVKDHR 239

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T  E ++ + V+DG++D+F++  L  K
Sbjct: 240 TKFENSNTTSVMDGNIDNFIEEYLKWK 266


>gi|162447071|ref|YP_001620203.1| peptide chain release factor RF-1 [Acholeplasma laidlawii PG-8A]
 gi|226739094|sp|A9NEP7|RF1_ACHLI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|161985178|gb|ABX80827.1| peptide chain release factor RF-1 [Acholeplasma laidlawii PG-8A]
          Length = 354

 Score =  199 bits (505), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 109/347 (31%), Positives = 172/347 (49%), Gaps = 14/347 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +   +    L  K        +V E   LM+E + L++A+   ++          
Sbjct: 1   MFERLEVMRKTYYALQEKLASG--ISDVKEITKLMKELKSLEDAVVAYEKYLSLKEQLKD 58

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
           L EL   E + S+L+      + ++ ++E  +       L     D  +  +E+   AGG
Sbjct: 59  LEELLELETESSVLEMAKAEEKSLESDIENLEESLRILLLPKDPDDDKNVIIEIKGAAGG 118

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E   +A  L +MY+++AE   +K   +    G   G      +I G NA+ +LK E GV
Sbjct: 119 DEGNIFAGDLFKMYSKYAESMGWKVTLVNTTPGSSGGFAGIEFIISGENAFSYLKHESGV 178

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS + +   P   + IE ++   D R DTY +SGAGGQ VNTT 
Sbjct: 179 HRVQRVPETESQGRIHTSTAVVLALP-EQEDIEYDVKWEDIRFDTYNSSGAGGQSVNTTY 237

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIPT VVV  Q+ERSQH NK +A+ +L  ++Y+   Q++ E    GES K  IG
Sbjct: 238 SAVRLTHIPTNVVVTSQEERSQHANKDRAYKLLVTRIYDKIQQEQLE--KEGESRKALIG 295

Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            G +   IR+Y   P   V D R  +       +++G +D  ++  +
Sbjct: 296 RGNRSEKIRTYNY-PQNRVTDHRIGLTINRLDAIMEGRIDLIIEPLI 341


>gi|293977757|ref|YP_003543187.1| bacterial peptide chain release factor 1 [Candidatus Sulcia
           muelleri DMIN]
 gi|292667688|gb|ADE35323.1| bacterial peptide chain release factor 1 (bRF-1) [Candidatus Sulcia
           muelleri DMIN]
          Length = 352

 Score =  199 bits (505), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 108/340 (31%), Positives = 179/340 (52%), Gaps = 8/340 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L+     P +  +  +   L +E + +   I++    +++      +  L
Sbjct: 11  IEVLKKRFYELSFLIIKPEIIHDNKKYVKLSKEYKIIYKIINYYNSYKEKKKYLKEIESL 70

Query: 76  ALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
                D  +L+      ++   +LE   K+ E LL    ++N+  +E+ AG GG E+  +
Sbjct: 71  IKLSSDKELLEFAIFEKKKNLLELEFLIKKIEYLLKKNNNTNNVLMELRAGTGGDEACIF 130

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
              + RMYT + ++  +K E L +  G   G K   + I+G N YG LK E GVHR+ R+
Sbjct: 131 VENIFRMYTMYFKELCWKYEILNMQQGTIKGYKEIIIEIQGKNVYGTLKFESGVHRVQRV 190

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS  ++ + P  D +  I I  SD + +T+RASGAGGQHVN T+SA+R+T
Sbjct: 191 PSTESQGRLHTSAITVAILPEEDYNNNINIVLSDLKRETFRASGAGGQHVNKTESAIRLT 250

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ-- 311
           HIPTG++ +CQ+ERSQHKN  +A  +LRA++Y+ EL+ + E   + +  K+ I  G +  
Sbjct: 251 HIPTGIIAECQEERSQHKNYEKAMKVLRARIYQSELKIKNE--KLSKERKSLISTGDRSA 308

Query: 312 -IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            IR+Y   P   V D R N         ++G +++ + A 
Sbjct: 309 KIRTYNY-PQGRVTDHRINKSIYYLDKFMNGKINEMITAL 347


>gi|224534432|ref|ZP_03675010.1| peptide chain release factor 1 [Borrelia spielmanii A14S]
 gi|224514534|gb|EEF84850.1| peptide chain release factor 1 [Borrelia spielmanii A14S]
          Length = 357

 Score =  199 bits (505), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 125/342 (36%), Positives = 189/342 (55%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++A  ++  +  K +D +L +N  +   +++E  HL+   +   E +  L        +
Sbjct: 6   LNSATSKIKSIEEKLQDINLIKNQKKYSKIIKEYTHLEKINTKKIEYEKILNQINDNKTI 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
             +ED   + +     L  +  + E  + E         E DS +  +E+ AG GG E+ 
Sbjct: 66  LEKEDQQEMKELIKQELIDLDKKKEEVEHEIKILLLPQDENDSKNIIIEIRAGTGGEEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +AN L  MY +++EK+K+KTE +  ++ E  G K     IKG + +  LK E GVHR+ 
Sbjct: 126 LFANNLYGMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +SN R  TS +++ V P ++++    I+E D RID YR+SGAGGQHVNTTDSAVR
Sbjct: 186 RIPITESNGRLQTSAATVAVLPNIEETEID-INEKDLRIDVYRSSGAGGQHVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++G G  
Sbjct: 245 ITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSNNRKQQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   + D R NI      + + G+LD  +   
Sbjct: 303 SERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDPLLDPL 343


>gi|94502363|ref|ZP_01308828.1| peptide chain release factor 1 [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
 gi|161833646|ref|YP_001597842.1| peptide chain release factor 1 [Candidatus Sulcia muelleri GWSS]
 gi|94451077|gb|EAT14037.1| peptide chain release factor 1 [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
 gi|152206135|gb|ABS30445.1| peptide chain release factor 1 [Candidatus Sulcia muelleri GWSS]
          Length = 355

 Score =  199 bits (505), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 109/345 (31%), Positives = 183/345 (53%), Gaps = 8/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L+     P +  +  +   L +E + +   I++    +++      +  L
Sbjct: 11  IEVLKKRFYELSFLIIKPEIIHDNKKYVKLSKEYKIIYKIINYYNSYKEKKKYLKEIESL 70

Query: 76  ALEEDDCSILQETSDNLQRI--KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
              + D  +L+      ++   +LE   K+ E LL    ++N+  +E+ AG GG E+  +
Sbjct: 71  IKLDSDKELLEFAIFEKKKNLLELEFLIKKIEYLLKKNNNTNNVLMELRAGTGGDEACIF 130

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
              + RMYT + ++  +K E L +  G   G K   + I+G N YG LK E GVHR+ R+
Sbjct: 131 VENIFRMYTMYFKELCWKYEILNMQQGTIKGYKEIIIEIQGKNVYGTLKFESGVHRVQRV 190

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS  ++ + P  D +  I I  SD + +T+RASGAGGQHVN T+SA+R+T
Sbjct: 191 PSTESQGRLHTSAITVAILPEEDYNNNINIVLSDLKRETFRASGAGGQHVNKTESAIRLT 250

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ-- 311
           HIPTG++ +CQ+ERSQHKN  +A  +LRA++Y+ EL+ + E   + +  K+ I  G +  
Sbjct: 251 HIPTGIIAECQEERSQHKNYEKAMKVLRARIYQSELKIKNE--KLSKERKSLISTGDRSA 308

Query: 312 -IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            IR+Y   P   V D R N         ++G +++ + A   ++K
Sbjct: 309 KIRTYNY-PQGRVTDHRINKSIYYLDKFMNGKINEMITALKILEK 352


>gi|224532320|ref|ZP_03672952.1| peptide chain release factor 2 [Borrelia valaisiana VS116]
 gi|224511785|gb|EEF82191.1| peptide chain release factor 2 [Borrelia valaisiana VS116]
          Length = 269

 Score =  199 bits (505), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 136/267 (50%), Positives = 184/267 (68%), Gaps = 1/267 (0%)

Query: 88  TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
                  ++ + +     S    E D+N A+L +H+GAGGTE+ DW  ML RMY+R+ E+
Sbjct: 1   MEIEFNILEKQYKDLLTISYFKEELDANGAFLTIHSGAGGTEACDWVAMLYRMYSRYVER 60

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           +K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+HRL+RISP+D+  +RHTSF+
Sbjct: 61  KKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRISPFDAAKKRHTSFA 119

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           S++V PV+D+ IEI I   D RIDTYRASGAGGQHVN T SAVRITHI TG+V Q Q +R
Sbjct: 120 SVFVDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITHIETGIVTQSQSDR 179

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQHKNK  A  +L+++LYE    K +E     + +K EI WG QIRSYV QPY +VKD R
Sbjct: 180 SQHKNKEMAMKVLKSRLYEYYKNKEDEKNKSKQDTKKEISWGNQIRSYVFQPYNLVKDHR 239

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T  E ++ + V+DG++D+F++  L  K
Sbjct: 240 TKFENSNTTSVMDGNIDNFIEEYLKWK 266


>gi|145596156|ref|YP_001160453.1| peptide chain release factor 1 [Salinispora tropica CNB-440]
 gi|145305493|gb|ABP56075.1| bacterial peptide chain release factor 1 (bRF-1) [Salinispora
           tropica CNB-440]
          Length = 362

 Score =  199 bits (505), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 105/336 (31%), Positives = 163/336 (48%), Gaps = 12/336 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            +   + L  +  DP +  +   A+ + R    L        E+     D     ELA E
Sbjct: 9   LLDEYAELENRLADPAIHADQNTARRVGRRYAELVPLHKAATELTQARADLAAAKELAAE 68

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +   +   E          E   +    +     D+ D  +E+ AG GG ES  +A  LL
Sbjct: 69  DPAFAAEAEAIAATLPALEECLAELL--IPRDPHDAKDVIVEIKAGEGGEESALFAGDLL 126

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVHRLV 191
           RMYTR+AE+  +  E ++  D +  G+K  +L IK           +  LK E GVHR+ 
Sbjct: 127 RMYTRYAERCGWLVEVIDAQDSDLGGVKDVSLAIKSKGVPEGGNGVWSRLKWEGGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS + + + P   + I++ I  ++ RID +R+SG GGQ VNTTDSAVR
Sbjct: 187 RVPVTESQGRIHTSAAGVLMLP-EAEEIDVTIDPNELRIDVFRSSGPGGQSVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGR 310
           ITH+PTG+VV CQ E+SQ +N+ QA  +LRA+L  +  ++ +  A+    ++   +    
Sbjct: 246 ITHLPTGIVVSCQNEKSQLQNREQAMRILRARLLAVAQEQADAAASDARKAQVRTVDRSE 305

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +IR+Y   P   + D R      +    L G+LD  
Sbjct: 306 RIRTYNF-PQNRITDHRIGYTAYNLDLALAGELDGV 340


>gi|38233635|ref|NP_939402.1| peptide chain release factor 1 [Corynebacterium diphtheriae NCTC
           13129]
 gi|81564890|sp|Q6NHU0|RF1_CORDI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|38199895|emb|CAE49561.1| peptide chain release factor 1 (RF-1) [Corynebacterium diphtheriae]
          Length = 356

 Score =  199 bits (505), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 117/346 (33%), Positives = 175/346 (50%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V     +  +  DP    +    + L +    L   I+   ++     D+    E+
Sbjct: 7   VDDIVSEYQGIEAQMSDPETMGDQTLFRKLSKRYSELQPIINVNNKLVQARDDHEAAEEM 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E+ + +   E          E              D +D  +EV AGAGG E+  +A 
Sbjct: 67  AYEDKEFAAEAERLAEEIVSLEEQLADLL--APRDPHDGDDIVMEVKAGAGGEEAALFAG 124

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190
            L+RMY R+AEK  F  E L + + +  G+K  TL I+        A+   K E GVHR+
Sbjct: 125 ELVRMYQRYAEKHGFTVEVLGLSESDLGGVKDMTLSIRSKTPSRDGAWSVFKFEGGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R  TS + + VYP  D+  E+EI + D R+D YR+SG GGQ VNTTDSAV
Sbjct: 185 QRVPVTESQGRIQTSAAGVLVYPEPDEVAEVEIDDKDLRVDVYRSSGKGGQGVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG+VV CQ+ERSQ +NKA+A  +L A+L  +  ++ E  A  G +++   +   
Sbjct: 245 RITHLPTGLVVTCQKERSQIQNKARAMQVLAARLQAMAEEQAEAEAAEGRAAQIRTMDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R   +  +   VL+GDLDD   A  A ++
Sbjct: 305 ERIRTYNW-PENRISDHRIGYKANNLDSVLNGDLDDLFSALQAAER 349


>gi|118475342|ref|YP_892837.1| peptide chain release factor 1 [Campylobacter fetus subsp. fetus
           82-40]
 gi|166223541|sp|A0RRK4|RF1_CAMFF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118414568|gb|ABK82988.1| peptide chain release factor 1 [Campylobacter fetus subsp. fetus
           82-40]
          Length = 355

 Score =  198 bits (504), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 108/341 (31%), Positives = 173/341 (50%), Gaps = 9/341 (2%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           + R + LN+   DP +  ++     L +E+++L++     +     L        L  + 
Sbjct: 10  IDRYNELNSILSDPEVINDISRMTKLSKEQRNLESIKDATQRYLSILNGIEENKTLLEDP 69

Query: 80  DDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +   + ++    L+       E  +   L     D  + +LE+ AG GG E+  +   L 
Sbjct: 70  ELGELAKDELKALETELPKLEEEIKLLLLPKDPNDEKNIFLELRAGTGGDEAALFVGDLA 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
             Y R+ E+R +K E +   +G   G K   LLIKG  AY  LK E G HR+ R+   +S
Sbjct: 130 TAYIRYTEERGYKYEIVSSSEGSAGGYKELILLIKGEGAYSRLKYEGGTHRVQRVPETES 189

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS  ++ + P V+DS    I+ +D +ID  R+SG GGQ VNTTDSAVR+THIPTG
Sbjct: 190 QGRVHTSAITVAIMPEVEDSEID-INPNDLKIDVMRSSGHGGQSVNTTDSAVRVTHIPTG 248

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSY 315
           +VV  Q  +SQHKNK  A  +L+A+LY+++ ++R E     +  K ++G G    +IR+Y
Sbjct: 249 LVVVNQDGKSQHKNKDAAIKVLKARLYDMQERERRE--KESKERKDQVGTGDRSGRIRTY 306

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
              P   + D R N+       ++  G  D+ +   +A  +
Sbjct: 307 NY-PQNRISDHRINLTLYRLDAIMAAGLFDEIIDPLIAHYQ 346


>gi|53711665|ref|YP_097657.1| peptide chain release factor RF-2 [Bacteroides fragilis YCH46]
 gi|60679910|ref|YP_210054.1| putative peptide chain release factor [Bacteroides fragilis NCTC
           9343]
 gi|253564278|ref|ZP_04841735.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|265765049|ref|ZP_06093324.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|52214530|dbj|BAD47123.1| peptide chain release factor RF-2 [Bacteroides fragilis YCH46]
 gi|60491344|emb|CAH06092.1| putative peptide chain release factor [Bacteroides fragilis NCTC
           9343]
 gi|251948054|gb|EES88336.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|263254433|gb|EEZ25867.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|301161435|emb|CBW20975.1| putative peptide chain release factor [Bacteroides fragilis 638R]
          Length = 319

 Score =  198 bits (504), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 123/315 (39%), Positives = 187/315 (59%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+  + L   I    +++    +  +  +     D+    QE  +   +    VE  + +
Sbjct: 1   MKLVKGLQKWIEGYNDVKTLTDELELAFDFYK--DELVTEQEVDEAYAKALEHVENLELQ 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  EAD     L++++GAGGTESQDWA+ML+RMY R+AE   +K     + +G+EAGI
Sbjct: 59  NMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYLRYAETNGYKATMANLQEGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T+ I+G  AYG+LKGE GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+ I  
Sbjct: 119 KTCTIQIEGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNILP 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAW 277
           +    DT+R+ GAGGQ+VN  +S VR+ +            ++++  + R Q KN+  A 
Sbjct: 179 ACISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNRENAM 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
             LR+ LY+ ELQ R       E+ K +I WG QIRSYV    + VKD RTN + +  + 
Sbjct: 239 RQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNG 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DG ++ F+KA L 
Sbjct: 298 VMDGKIEGFIKAYLM 312


>gi|15892685|ref|NP_360399.1| peptide chain release factor 1 [Rickettsia conorii str. Malish 7]
 gi|20139335|sp|Q92HK9|RF1_RICCN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|15619858|gb|AAL03300.1| peptide chain release factor RF-1 [Rickettsia conorii str. Malish
           7]
          Length = 355

 Score =  198 bits (504), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 123/347 (35%), Positives = 184/347 (53%), Gaps = 16/347 (4%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           +    + +   L  K     +  +  E     +E   L++ ++ IKE      +      
Sbjct: 6   NLAKILDKYENLGNKLSS-GIMGD--EFVKASKEYAELEDVVAKIKEYNKAKSELEEANN 62

Query: 75  LALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LE    +   E  ++                +   L   +ADS  A +EV AG+GG E
Sbjct: 63  FKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGGEE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A +L  MY R+AE + +  E L I D    G K A+  IKG + +  LK E GVHR
Sbjct: 123 AALFAAVLFNMYQRYAELKGWHFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P   + ++I+I + D RIDTYRASGAGGQHVNTTDSA
Sbjct: 183 VQRVPETESQGRIHTSAATVAVLP-EAEEVDIKIEDKDLRIDTYRASGAGGQHVNTTDSA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG+ V  Q E+SQHKNKA+A  +LRA++YE E +  ++     +S + ++G G
Sbjct: 242 VRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERR--KKEQERADSRRGQVGSG 299

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
               +IR+Y   P   V D R N+      +V+ +G LD+F++A +A
Sbjct: 300 DRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345


>gi|297622890|ref|YP_003704324.1| peptide chain release factor 1 [Truepera radiovictrix DSM 17093]
 gi|297164070|gb|ADI13781.1| peptide chain release factor 1 [Truepera radiovictrix DSM 17093]
          Length = 373

 Score =  198 bits (504), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 105/347 (30%), Positives = 165/347 (47%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N  +    L     DP L  +    +  M     L   +   +E +D +       E 
Sbjct: 5   LENLRREFDELEASLGDPELIADQARYREAMGRYSELQTIVRTYREYKDLVDGLQNAREA 64

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E       +++      +   L     D  +  +E+ A AGG E+  +A
Sbjct: 65  LADPELAEMAREEIAALEPQLEALERRLERLLLPKDPFDDKNVIVEIRAAAGGDEASLFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             +  MY R+AE + FKTE L+ H     G    +  I G  AY   K E GVHR+ R+ 
Sbjct: 125 AEVFEMYRRYAEAQGFKTEVLDSHPSSVGGFSKVSFEILGRGAYSKFKFESGVHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P   + +++++S +D R+D +R+SG GGQ VNTTDSAVRIT+
Sbjct: 185 ATETQGRIHTSTVTVAVLP-EAEDVDVQLSPADYRVDVFRSSGPGGQSVNTTDSAVRITY 243

Query: 255 IP---TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
            P     +VV CQ  +SQ KNK +A  +LRA+L E E ++    A        +IG G +
Sbjct: 244 KPGTSDEIVVTCQDGKSQIKNKEKALAVLRARLLERERERAAAEAREARL--VQIGSGER 301

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              IR+Y   P   + D R      + SDVL G LD+  +A  + ++
Sbjct: 302 SEKIRTYNF-PQSRITDHRIGYTTHNLSDVLLGKLDELTEALSSAEQ 347


>gi|217077770|ref|YP_002335488.1| peptide chain release factor 1 [Thermosipho africanus TCF52B]
 gi|217037625|gb|ACJ76147.1| peptide chain release factor 1 [Thermosipho africanus TCF52B]
          Length = 358

 Score =  198 bits (504), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 124/336 (36%), Positives = 178/336 (52%), Gaps = 14/336 (4%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
            + L  L  K           + +    +   +       KE  +   +      L  EE
Sbjct: 15  KKLLKSLEEKLSSQLT---PDQIRTYSEKYSKMKEIFQLAKEYLEIEDEIE----LWKEE 67

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
                  E     ++ +  ++      L   E    + +LE+ AG GG E+  +A  LLR
Sbjct: 68  MPEGFEHEVEKLQKKQEDIMQDLISLVLPESEYSGKNVFLEIRAGTGGEEAALFAADLLR 127

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY R+ EK+ FK E ++ +  +  G K   + IKG N    LK E GVHR+ R+   +S 
Sbjct: 128 MYLRYVEKKNFKAEIVDENKTDLGGYKEVVIKIKGKNVGNLLKYESGVHRVQRVPTTESG 187

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS +++ V P    ++EIEI+ SD RIDTYRASGAGGQ+VN T+SAVRITHIPTG+
Sbjct: 188 GRIHTSTATVAVLP-EVSNVEIEINPSDIRIDTYRASGAGGQYVNKTESAVRITHIPTGI 246

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYV 316
           VV CQ ERSQ +NK QA N+LRA+L++L+L+  E+   I  + K++IG G +   IR+Y 
Sbjct: 247 VVTCQSERSQLQNKEQAMNILRARLFKLKLE--EQERKISSNRKSQIGTGERSEKIRTYN 304

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             P   V D R N    +   VLDG+LD+F+   + 
Sbjct: 305 F-PQNRVTDHRINYTSYNLQAVLDGELDEFITRLMR 339


>gi|269128128|ref|YP_003301498.1| peptide chain release factor 1 [Thermomonospora curvata DSM 43183]
 gi|268313086|gb|ACY99460.1| peptide chain release factor 1 [Thermomonospora curvata DSM 43183]
          Length = 361

 Score =  198 bits (504), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 114/350 (32%), Positives = 172/350 (49%), Gaps = 13/350 (3%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            + D  +   + +  K  DP +  +   A+ L +    L   +   ++++    D     
Sbjct: 1   MNLDELIGEYTEIEGKLADPAVHADQNAARRLGKRYAQLRPIVETARQLRSVEGDLEAAR 60

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ELA E+   +      +  +      +  +   +     D  D  LE+ AG GG ES  +
Sbjct: 61  ELAAEDGAFAAEAAELEKRRTELE--QKLRKLLIPRDPNDDKDVILEIKAGEGGEESALF 118

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN--------AYGWLKGEQ 185
           A  LLRMY R+AE+  +KTE L     +  G K  T+ +K           A+  LK E 
Sbjct: 119 AGDLLRMYLRYAERIGWKTEILSSQPSDLGGYKDVTVAVKARPGPDGEPIGAWSHLKFEG 178

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS   + V P   + I+++I  +D RID YR+SG GGQ VNT
Sbjct: 179 GVHRVQRVPVTESQGRIHTSAVGVLVTP-EAEEIDVQIDPNDLRIDVYRSSGPGGQSVNT 237

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITH+PTGVVV CQ E+SQ +NK QA  +LR++L  L  Q+ E  A     S+  
Sbjct: 238 TDSAVRITHLPTGVVVSCQNEKSQLQNKEQAMRILRSRLLALAQQEAEAAAAAERRSQVR 297

Query: 306 -IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +    ++R+Y   P   + D R   +  +   VLDGDL + ++  +   
Sbjct: 298 TVDRSERVRTYNF-PENRISDHRVGYKAYNLDQVLDGDLHNVIQTLVEAD 346


>gi|225548553|ref|ZP_03769601.1| peptide chain release factor 1 [Borrelia burgdorferi 94a]
 gi|225370816|gb|EEH00251.1| peptide chain release factor 1 [Borrelia burgdorferi 94a]
          Length = 357

 Score =  198 bits (504), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 123/347 (35%), Positives = 190/347 (54%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++A  ++  +  K +D +L ++  +   +++E   L+   +   E +  L        +
Sbjct: 6   LNSATSKIKLIEEKLQDINLIKDQKKYSKIIKEYTCLEKINTKKIEYEKILSQINDTKTI 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +ED   + +     L  +  + E  +       L   E DS +  +E+ AG GG E+ 
Sbjct: 66  LEKEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGTGGEEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +AN L  MY +++EK+K+KTE +  ++ E  G K     IKG + +  LK E GVHR+ 
Sbjct: 126 LFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +SN R  TS +++ V P ++++    I+E D RID YR+SGAGGQHVNTTDSAVR
Sbjct: 186 RIPITESNGRLQTSAATVAVLPNIEETEID-INEKDLRIDVYRSSGAGGQHVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++G G  
Sbjct: 245 ITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R NI      + + G+LD  +   +   +
Sbjct: 303 SERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDPLLDPLMIALQ 348


>gi|154490399|ref|ZP_02030660.1| hypothetical protein PARMER_00632 [Parabacteroides merdae ATCC
           43184]
 gi|154089010|gb|EDN88054.1| hypothetical protein PARMER_00632 [Parabacteroides merdae ATCC
           43184]
          Length = 322

 Score =  198 bits (504), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 130/315 (41%), Positives = 190/315 (60%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M++ + L   I    E+     +  +  +     +     +E  +        VE  +F 
Sbjct: 1   MKKVKELKKWIELYNEVHAAAEELQLAYDYVK--EGIVSEEEVDEAYGNAIQLVESLEFR 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  EAD     L++++GAGGTESQDWA+MLLRMYTRWAE   +K       +G+EAGI
Sbjct: 59  NMLRQEADQMSCVLKINSGAGGTESQDWASMLLRMYTRWAEANGYKISVANYQEGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ATL I+G  AYG+LKGE GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE++I +
Sbjct: 119 KTATLNIEGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVKIDQ 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAW 277
           +    DT+R+ GAGGQ+VN  +S VR+ +            ++++  + R Q KN+  A 
Sbjct: 179 AAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAM 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
             LR+ LY+ ELQ R E     E+ K +I WG QIRSYV    + VKD RTN + +  + 
Sbjct: 239 RQLRSILYDKELQHRMEEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNFQTSDVNG 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DG +DDF+KA L 
Sbjct: 298 VMDGKIDDFIKAYLM 312


>gi|296116158|ref|ZP_06834776.1| peptide chain release factor 1 [Gluconacetobacter hansenii ATCC
           23769]
 gi|295977264|gb|EFG84024.1| peptide chain release factor 1 [Gluconacetobacter hansenii ATCC
           23769]
          Length = 353

 Score =  198 bits (504), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 110/348 (31%), Positives = 172/348 (49%), Gaps = 13/348 (3%)

Query: 14  FD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           FD   D  V R   L     +     +        RE   LD  ++ +  ++        
Sbjct: 4   FDERLDRIVARGEELQALLAEG---LSGAAFSQASREFAELDPIVAKVNALRATEQAVQD 60

Query: 72  LLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
              L  + +   + +     L+R         +   L   EAD   A LE+   AGG E+
Sbjct: 61  TQALLDDPEMRGLAESELAELRRRIPELEHDIRIAMLPRDEADDRSAILEIRPAAGGDEA 120

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  +   Y R+A++R ++ E LE  + E  G++     I G   +  LK E GVHR+
Sbjct: 121 ALFAGQMFGAYQRYADQRGWRFEILEYDESELGGLREGIASITGRGVFARLKYESGVHRV 180

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS  ++ V P   + +++EI+++D RID YRASGAGGQHVN T+SAV
Sbjct: 181 QRVPATESQGRIHTSTVTVAVLP-EAEEVDVEINDNDLRIDVYRASGAGGQHVNKTESAV 239

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+P+G+VV  Q+E+SQHKN+A+A  +LRA+LY  E  +           ++++G G 
Sbjct: 240 RITHMPSGIVVAMQEEKSQHKNRAKAMKILRARLY--ERNRAAAHETRAADRRSQVGTGD 297

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       V+ G+ D+F+ A    ++
Sbjct: 298 RSERIRTYNF-PQGRVTDHRIGLTLYKIDKVMGGEFDEFVDALTQEEQ 344


>gi|300025029|ref|YP_003757640.1| peptide chain release factor 1 [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299526850|gb|ADJ25319.1| peptide chain release factor 1 [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 359

 Score =  198 bits (504), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 110/326 (33%), Positives = 169/326 (51%), Gaps = 14/326 (4%)

Query: 39  VIEAKMLMRERQHLDN---AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
             +   L +E   L      I  +++ +    D   LL     + D + L          
Sbjct: 29  QAQYVKLTKEFAELSPAAAQIEALRKAEAESADLEQLLRDPSADKDMADLAYAERAALAE 88

Query: 96  KLEVEYKQFESLLSGEA--DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
           ++    +Q    L  +   D   A LEV AG GG E+  +A  L RMY+R+A+ R +K E
Sbjct: 89  RIGGLEQQLRIALLPKDAADEKSAILEVRAGTGGDEAALFAADLFRMYSRYADLRGWKVE 148

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            +   + +  G K     I G   +  LK E GVHR+ R+   +++ R HTS +++ V P
Sbjct: 149 VISASENDLGGYKEIVASITGEGVFARLKFESGVHRVQRVPATEASGRIHTSAATVAVLP 208

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
              + +EI+I   D RIDT RA GAGGQHVN T+SAVRITH+PTG+VV    E+SQH+N+
Sbjct: 209 -EAEDVEIDIKPDDIRIDTMRAGGAGGQHVNKTESAVRITHLPTGIVV-VSAEKSQHQNR 266

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRTNI 330
             A N+L+A++YELE +K        ++ K+++G G    +IR+Y   P   V D R N+
Sbjct: 267 RLAMNVLKARVYELEREK--AATERSDARKSQVGSGDRSQRIRTYNF-PQGRVTDHRINL 323

Query: 331 EKTSPSDVLDGD-LDDFMKATLAIKK 355
              +  +V+ G+ LD  + A +   +
Sbjct: 324 TLYNLDEVMVGNGLDALVDALITDHQ 349


>gi|254778803|ref|YP_003056908.1| peptide chain release factor 1 [Helicobacter pylori B38]
 gi|254000714|emb|CAX28630.1| Peptide chain release factor 1 (RF-1) [Helicobacter pylori B38]
          Length = 352

 Score =  198 bits (504), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 103/345 (29%), Positives = 176/345 (51%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L D     EL
Sbjct: 8   LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLEDIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    +  +     D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y   K E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRFKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P   D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PT + V  Q E+SQHKNK +A  +L+ +LYE ++++++      +  K ++G G    +
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKVRLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + + R N+   S  +++  G+LD+ +   +A  +
Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348


>gi|218259544|ref|ZP_03475251.1| hypothetical protein PRABACTJOHN_00909 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225027|gb|EEC97677.1| hypothetical protein PRABACTJOHN_00909 [Parabacteroides johnsonii
           DSM 18315]
          Length = 322

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 130/315 (41%), Positives = 190/315 (60%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M++ + L   I    E+     +  +  +     +     +E  +        VE  +F 
Sbjct: 1   MKKVKELKKWIELYNEVHAAAEELQLAYDYVK--EGIVSEEEVDEAYGNAIQLVESLEFR 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  EAD     L++++GAGGTESQDWA+MLLRMYTRWAE   +K       +G+EAGI
Sbjct: 59  NMLRQEADQMSCVLKINSGAGGTESQDWASMLLRMYTRWAEANGYKISVANYQEGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ATL I+G  AYG+LKGE GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE++I +
Sbjct: 119 KTATLNIEGDYAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVKIDQ 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAW 277
           +    DT+R+ GAGGQ+VN  +S VR+ +            ++++  + R Q KN+  A 
Sbjct: 179 AAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAM 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
             LR+ LY+ ELQ R E     E+ K +I WG QIRSYV    + VKD RTN + +  + 
Sbjct: 239 RQLRSILYDKELQHRMEEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNG 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DG +DDF+KA L 
Sbjct: 298 VMDGKIDDFIKAYLM 312


>gi|15639045|ref|NP_218491.1| peptide chain release factor 1 [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|6093956|sp|O83090|RF1_TREPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|3322309|gb|AAC65047.1| peptide chain release factor 1 (prfA) [Treponema pallidum subsp.
           pallidum str. Nichols]
          Length = 351

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 106/342 (30%), Positives = 169/342 (49%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    +   L  + E+P L+ +    +  MR+  +L   +                  L
Sbjct: 5   LEELRAQWRKLQQEVENPSLFSSTQSYRERMRDHAYLSRLMEEYDRYLLTEKQLEDAHVL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQF----ESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +E D          ++ ++  +   Q       +        +  +E+  G GG E+ 
Sbjct: 65  IQDESDADFKDVIRQEIRTLEAALHTSQKRLKTLLIPPDSLQEKNIIMEIRGGTGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMYT +AE ++++ E L + + E  G K  T  I G + YG L+ E GVHR+ 
Sbjct: 125 LFAADLFRMYTHYAESKQWRYEVLAVSETELGGFKEITFSISGRDVYGSLRYESGVHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS  ++ V P ++++    I   D R+D  RASG GGQ VNTTDSAVR
Sbjct: 185 RVPSTEASGRIHTSAVTVAVLPEMEETEVD-IRAEDVRVDVMRASGPGGQCVNTTDSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +TH+PTG+VV CQ E+SQ KNKA+A  +LR+++Y+LE  KR+         K+++G G  
Sbjct: 244 LTHLPTGIVVVCQDEKSQIKNKAKAMRVLRSRVYDLEESKRQ--VARARERKSQVGSGDR 301

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   V D R  +       V+ G LDD ++  
Sbjct: 302 SERIRTYNF-PQNRVTDHRVRVTLYKLDAVMQGALDDIIEPL 342


>gi|298711208|emb|CBJ32429.1| peptide chain release factor 1 [Ectocarpus siliculosus]
          Length = 448

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 93/352 (26%), Positives = 164/352 (46%), Gaps = 17/352 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +  + L  +  DP +  N      + +ER  ++  ++   E      D     E+
Sbjct: 80  LSGIDRTFNELTERLGDPDVLANPKLIMEVSQERASVEEIVNCYAEYTKAAEDLEGAKEM 139

Query: 76  A--------LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
                      E      +E  D  + ++      +   L +   D  +  LE+ AG GG
Sbjct: 140 FTESSGAGGDAEMKEMAREEIRDLEEVMEALETKMKLLLLPTDPNDDRNVMLEIRAGTGG 199

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  WA  LL +Y ++A ++ +  + +E    E  G ++    + G   Y  LK E GV
Sbjct: 200 DEAALWAAELLGVYKKYALEQGWSLKVIESAMVEAGGFRTVIAEVNGDKVYSKLKYEAGV 259

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ + P   D + + I   D  I T R+ G+GGQ+VN  +
Sbjct: 260 HRVQRVPATETQGRVHTSTATVAIMP-EVDEVAVNIRPEDIEIKTARSGGSGGQNVNKVE 318

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAV + H PTG+ + C QERSQ KN+  A  +LR+++Y++EL+K++       + K ++G
Sbjct: 319 SAVDLFHKPTGIRIFCTQERSQLKNREVAMKLLRSRVYDIELEKQQAE--TSGNRKAQVG 376

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIKK 355
            G    +IR+Y  +      D R   +    ++ L G  LDD + A + + +
Sbjct: 377 SGSRSEKIRTYNWKD-SRCSDHRIG-KNFPLNNFLSGSGLDDMIGACILLDQ 426


>gi|312148979|gb|ADQ29050.1| peptide chain release factor 1 [Borrelia burgdorferi N40]
          Length = 357

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 121/347 (34%), Positives = 190/347 (54%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   ++  +  K +D +L ++  +   +++E  +L+   +   E +  L        +
Sbjct: 6   LNSTTSKIKLIEEKLQDINLIKDQKKYSKIIKEYTYLEKINTKKIEYEKILSQINDTKTI 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +ED   + +     L  +  + E  +       L   E DS +  +E+ AG GG E+ 
Sbjct: 66  LEKEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGTGGEEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +AN L  MY +++EK+K+KTE +  ++ E  G K     IKG + +  LK E GVHR+ 
Sbjct: 126 LFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +SN R  TS +++ V P ++++    I+E D RID YR+SGAGGQHVNTTDSAVR
Sbjct: 186 RIPITESNGRLQTSAATVAVLPNIEETEID-INEKDLRIDVYRSSGAGGQHVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VVQCQ ERSQ+KNK QA  +LRA+LYE E  K++E      + K ++G G  
Sbjct: 245 ITHLPTGIVVQCQNERSQYKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R NI      + + G+LD  +   +   +
Sbjct: 303 SERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDPLLDPLMIALQ 348


>gi|159039554|ref|YP_001538807.1| peptide chain release factor 1 [Salinispora arenicola CNS-205]
 gi|157918389|gb|ABV99816.1| peptide chain release factor 1 [Salinispora arenicola CNS-205]
          Length = 362

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 104/339 (30%), Positives = 163/339 (48%), Gaps = 12/339 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               +   + L  +  DP +  +   A+ + R    L        E++    D     EL
Sbjct: 6   LAALLDEYADLEKRLADPAIHADQNMARRVGRRYAELVPLHKAASELEQARADLAAAKEL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E+       E          E   +    +     D+ D  +E+ AG GG ES  +A 
Sbjct: 66  AAEDPAFVGEAEAMAAALPALEEGLAELL--IPRDPHDAKDVIVEIKAGEGGEESALFAG 123

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVH 188
            LLRMYTR+AE+  +  E ++  D +  G+K  +L IK           +  LK E GVH
Sbjct: 124 DLLRMYTRYAERCGWLVEVIDAQDSDLGGVKDVSLAIKSKGVPEGGNGVWSRLKWEGGVH 183

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + + P   + +++ I  ++ RID +R+SG GGQ VNTTDS
Sbjct: 184 RVQRVPVTESQGRIHTSAAGVLMLP-EAEEVDVTIDPNELRIDVFRSSGPGGQSVNTTDS 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307
           AVRITH+PTG+VV CQ E+SQ +N+ QA  +LRA+L  +  ++ +  A+    ++   + 
Sbjct: 243 AVRITHLPTGIVVSCQNEKSQLQNREQALRILRARLLAVAQEQADAAASDARKAQVRTVD 302

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
              +IR+Y   P   + D R      +    L G+LD  
Sbjct: 303 RSERIRTYNF-PQNRITDHRIGYTAYNLDLALAGELDGV 340


>gi|261886265|ref|ZP_06010304.1| peptide chain release factor 1 [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 355

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 105/341 (30%), Positives = 172/341 (50%), Gaps = 9/341 (2%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           + R + LN+   DP +  ++     L +E+++L++     +     L        L  + 
Sbjct: 10  IDRYNELNSILSDPEVINDISRMTKLSKEQRNLESIKDATQRYLSILNGIEENKTLLEDP 69

Query: 80  DDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +   + ++    L+       E  +   L     D  + +LE+ AG GG E+  +   L 
Sbjct: 70  ELGELAKDELKALETELPKLEEEIKLLLLPKDPNDEKNIFLELRAGTGGDEAALFVGDLA 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
             Y R+ E+R +K E +   +G   G K   LLIKG  AY  LK E G HR+ R+   +S
Sbjct: 130 TAYIRYTEERGYKYEIVSSSEGSAGGYKELILLIKGEGAYSRLKYEGGTHRVQRVPETES 189

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS  ++ + P V+DS    I+ +D +ID  R+SG GGQ VNT+ S+VR+THIPTG
Sbjct: 190 QGRVHTSAITVAIMPEVEDSEID-INPNDLKIDVMRSSGHGGQSVNTSVSSVRVTHIPTG 248

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSY 315
           +VV  Q  +SQHKNK  A  +L+A+LY+++ ++R E     +  K ++G G    +IR+Y
Sbjct: 249 LVVVNQDGKSQHKNKDAAIKVLKARLYDMQERERRE--KESKERKDQVGTGDRSGRIRTY 306

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
              P   + D R N+       ++  G  D+ +   +A  +
Sbjct: 307 NY-PQNRISDHRINLTLYRLDAIMAAGLFDEIIDPLIAHYQ 346


>gi|308183875|ref|YP_003928008.1| peptide chain release factor 1 [Helicobacter pylori SJM180]
 gi|308059795|gb|ADO01691.1| peptide chain release factor 1 [Helicobacter pylori SJM180]
          Length = 352

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 179/345 (51%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L     +  +  ++ +   L +E+  ++      KE    L D     EL
Sbjct: 8   LSSILKRYDELTALLSNAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLEDIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    +  +     D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEVVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P   D +E+ ++ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++      +  K ++G G    +
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + + R N+   S  +++  G+LD+ +   +A  +
Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348


>gi|153809227|ref|ZP_01961895.1| hypothetical protein BACCAC_03538 [Bacteroides caccae ATCC 43185]
 gi|149128203|gb|EDM19423.1| hypothetical protein BACCAC_03538 [Bacteroides caccae ATCC 43185]
          Length = 319

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 124/315 (39%), Positives = 188/315 (59%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+  + L   IS   E++    +  +  +     ++    ++      +    VE  + +
Sbjct: 1   MKLVKDLQKWISGYNEVKTLADELELAFDFYK--EELVTEEDVDAAYAKASEAVEALELK 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  EAD  D  L++++GAGGTESQDWA+ML+RMY R+AE   +K     + +G+EAGI
Sbjct: 59  NMLRDEADQMDCVLKINSGAGGTESQDWASMLMRMYLRYAETNGYKATIANLQEGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T+ I+G  AYG+LKGE GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+ I  
Sbjct: 119 KTCTINIEGDFAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNIET 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAW 277
           +    DT+R+ GAGGQ+VN  +S VR+ +            ++++  + R Q KN+  A 
Sbjct: 179 ARISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNRENAM 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
             LR+ LY+ ELQ R       E+ K +I WG QIRSYV    + VKD RTN + +  + 
Sbjct: 239 RQLRSILYDKELQHRMAEQAKVEAGKMKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNG 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DG +D F+KA L 
Sbjct: 298 VMDGKIDGFIKAYLM 312


>gi|229586782|ref|YP_002845283.1| peptide chain release factor 1 [Rickettsia africae ESF-5]
 gi|259585242|sp|C3PNN0|RF1_RICAE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|228021832|gb|ACP53540.1| Peptide chain release factor RF-1 [Rickettsia africae ESF-5]
          Length = 355

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 123/347 (35%), Positives = 185/347 (53%), Gaps = 16/347 (4%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           +    + +   L  K     +  +  E     +E   L++ ++ IKE      +      
Sbjct: 6   NLAKILDKYENLGNKLSS-GIMGD--EFVKASKEYAELEDVVAKIKEYNKAKSELEEANN 62

Query: 75  LALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LE    +   E  ++                +   L   +ADS  A +EV AG+GG E
Sbjct: 63  FKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGGEE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A +L  MY R+AE + ++ E L I D    G K A+  IKG + +  LK E GVHR
Sbjct: 123 AALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P   + ++I+I + D RIDTYRASGAGGQHVNTTDSA
Sbjct: 183 VQRVPETESQGRIHTSAATVAVLP-EAEEVDIKIEDKDLRIDTYRASGAGGQHVNTTDSA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG+ V  Q E+SQHKNKA+A  +LRA++YE E +  ++     +S + ++G G
Sbjct: 242 VRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERR--KKEQERADSRRGQVGSG 299

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
               +IR+Y   P   V D R N+      +V+ +G LD+F++A +A
Sbjct: 300 NRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345


>gi|332886361|gb|EGK06605.1| peptide chain release factor 2 [Dysgonomonas mossii DSM 22836]
          Length = 318

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 128/315 (40%), Positives = 197/315 (62%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+  + L   I    E++    +  +  +     +  +  +E  +  +     +E  + +
Sbjct: 1   MKIIRGLKGWIEGYNEVKASTDELQLAFDFQK--EGITTEEEVDEAYKNALSLIENLELK 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  E D   A L++++GAGGTE QDWA+ML RMY RW E +K+KT      DG+EAGI
Sbjct: 59  NMLRREEDKLGAVLKINSGAGGTEGQDWASMLFRMYQRWCEDKKYKTTITNWQDGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ATL ++G  AYG+LK E GVHRLVR+SP+++  +R TSF+S++V P+VDD+I+I+I+ 
Sbjct: 119 KTATLQVEGEYAYGYLKSENGVHRLVRVSPFNAQGKRMTSFASVFVVPLVDDTIDIDINL 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG--------VVVQCQQERSQHKNKAQAW 277
           SD   DT+R+SGAGGQ+VN  ++ VR+ +            +V++  + RSQ  NK  A 
Sbjct: 179 SDITWDTFRSSGAGGQNVNKVETGVRLHYKYKDPETGEEKEIVIENTESRSQFGNKDNAI 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
            +L+++LYELEL++R    +  E+ K +I WG QIRSYV    + VKD RTN + ++ + 
Sbjct: 239 RLLKSQLYELELERRSREQSKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSNVNA 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DGDLDDF+K  L 
Sbjct: 298 VMDGDLDDFIKEYLM 312


>gi|219123603|ref|XP_002182112.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406713|gb|EEC46652.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 406

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 125/359 (34%), Positives = 182/359 (50%), Gaps = 12/359 (3%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ--NVIEAKMLMRERQ---HLDNAISFIKEI 62
             L           +++ L T+   P  W   N   A ++  +      L   I   +E 
Sbjct: 36  KNLASTTKLPALQSQIADLETEQSQPDFWDEANTSRAAIVNAQVSTATRLLTRIQAWQEW 95

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
                  L +L     E+   +L E    + R++ + +  + E LLSG  D   A L + 
Sbjct: 96  HGDAQAALEILSQLASEERAMLLDEFRSAIARLREDSDRFELELLLSGPYDHAPARLLLT 155

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           AGAGGTE+ DW   L RMY R  E         +   GE  G KS  LL+ G NAYGWL+
Sbjct: 156 AGAGGTEANDWVGDLKRMYQRHCEAMGLSCVVQDEQAGEAVGYKSVELLVSGDNAYGWLQ 215

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI------SESDCRIDTYRAS 236
           GE+G HR+VR+SP+++N++R T+F+ + V P + +  +          ES+  I T RA 
Sbjct: 216 GEKGAHRMVRLSPFNANNKRQTTFAGVDVAPDILNQDDDAYWNTIDVPESELEITTMRAG 275

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ+VN  +SAVRI H+P+G+ V+C QERSQ  NK  A   L+A+L  +  ++R    
Sbjct: 276 GKGGQNVNKVNSAVRIKHLPSGLQVKCAQERSQSMNKNIALKRLKAQLLAIVQEQRVAEI 335

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354
                   E  WG QIR+YV  PY+MVKD RT  E ++    +DGD L++ + + L  K
Sbjct: 336 KEIRGDMVEASWGAQIRNYVFHPYKMVKDQRTGWETSNVQAFMDGDLLEECIGSFLRHK 394


>gi|34580401|ref|ZP_00141881.1| peptide chain release factor RF-1 [Rickettsia sibirica 246]
 gi|28261786|gb|EAA25290.1| peptide chain release factor RF-1 [Rickettsia sibirica 246]
          Length = 355

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 123/347 (35%), Positives = 185/347 (53%), Gaps = 16/347 (4%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           +    + +   L  K     +  +  E     +E   L++ ++ IKE      +      
Sbjct: 6   NLAKILDKYENLGNKLSS-GIMGD--EFVKASKEYAELEDVVAKIKEYNKAKSELEEANN 62

Query: 75  LALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LE    +   E  ++                +   L   +ADS  A +EV AG+GG E
Sbjct: 63  FKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGGEE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A +L  MY R+AE + ++ E L I D    G K A+  IKG + +  LK E GVHR
Sbjct: 123 AALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P   + ++I+I + D RIDTYRASGAGGQHVNTTDSA
Sbjct: 183 VQRVPETESQGRIHTSAATVAVLP-EAEEVDIKIEDKDLRIDTYRASGAGGQHVNTTDSA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG+ V  Q E+SQHKNKA+A  +LRA++YE E +  ++     +S + ++G G
Sbjct: 242 VRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERR--KKEQERADSRRGQVGSG 299

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
               +IR+Y   P   V D R N+      +V+ +G LD+F++A +A
Sbjct: 300 DRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345


>gi|330469860|ref|YP_004407603.1| peptide chain release factor 1 [Verrucosispora maris AB-18-032]
 gi|328812831|gb|AEB47003.1| peptide chain release factor 1 [Verrucosispora maris AB-18-032]
          Length = 362

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 111/350 (31%), Positives = 170/350 (48%), Gaps = 16/350 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               +   + L  +  DP +  +   A+ + R    L        E++    D     EL
Sbjct: 6   LARLLDEYAELEKRLADPAIHADQGTARRVGRRYAELVPLHKAAAELEQARADLAAAREL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E+   +   ET         E   +    +     D+ D  +E+ AG GG ES  +A 
Sbjct: 66  AAEDPSFAAEAETLAAELPALEERLAELL--IPRDPHDAKDVIVEIKAGEGGEESALFAG 123

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVH 188
            LLRMYTR+AE+R + TE ++  D +  G+K  +L IK           +  LK E GVH
Sbjct: 124 DLLRMYTRYAERRGWLTEVIDAQDSDLGGVKDVSLAIKTKGVPEGGNGVWSRLKWEGGVH 183

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V P   + +++ I  ++ RID +R+SG GGQ VNTTDS
Sbjct: 184 RVQRVPVTESQGRIHTSAAGVLVLP-EAEEVDVTIDPNELRIDVFRSSGPGGQSVNTTDS 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE--- 305
           AVRITH+PTG+VV CQ E+SQ +N+ QA  +LRA+L  L   + +  A   ++ K +   
Sbjct: 243 AVRITHLPTGIVVSCQNEKSQLQNREQAMRILRARL--LAAAQEQADAAASDARKAQVRT 300

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +    +IR+Y   P   + D R      +    L G+LD  + A     +
Sbjct: 301 VDRSERIRTYNF-PQNRITDHRIGYTAYNLDLALAGELDGVLDALSEADR 349


>gi|85713812|ref|ZP_01044802.1| Peptide chain release factor 1 [Nitrobacter sp. Nb-311A]
 gi|85699716|gb|EAQ37583.1| Peptide chain release factor 1 [Nitrobacter sp. Nb-311A]
          Length = 358

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 106/349 (30%), Positives = 172/349 (49%), Gaps = 16/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R + L  +        +      + RE   L+  +  +K+ +    +   +  +
Sbjct: 7   LDLLLARHAALENELLS---HVSADRYVQMTRELAELNPVVEAVKDWRAITAEIAGIDAM 63

Query: 76  ALEEDDCSILQETSDNLQR-----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  ++  +          ++  +   L     D  +  LEV AG GG E+
Sbjct: 64  IADPATDAEMRAMAEAERPALEARNNELMQQIRIALLPKDAMDERNVMLEVRAGTGGDEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A  + +K E +   +G   G K     ++G  AY  +K E GVHR+
Sbjct: 124 SLFAGDLFRMYERFAALQGWKVEVISASEGTMGGYKEIVAEVQGRGAYAKMKFESGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + +++EI   D RI+T RA GAGGQHVN T+SA+
Sbjct: 184 QRVPDTEAQGRVHTSAATVAVLP-EAEEVDVEIKPDDLRIETMRAQGAGGQHVNKTESAI 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG+VV  Q  RSQHKN+A A N+LR+++Y++E Q+    A      K ++G G 
Sbjct: 243 RITHIPTGIVVNMQDSRSQHKNRASAMNILRSRIYDVERQRIN--AARSADRKDQVGSGD 300

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V+ GD L + + A     +
Sbjct: 301 RSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGDALHELIDALTTEHQ 348


>gi|92116091|ref|YP_575820.1| peptide chain release factor 1 [Nitrobacter hamburgensis X14]
 gi|119361567|sp|Q1QQY7|RF1_NITHX RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91798985|gb|ABE61360.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrobacter
           hamburgensis X14]
          Length = 361

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 106/349 (30%), Positives = 169/349 (48%), Gaps = 16/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  + R + L  +               + RE   L+  +  +K  +    +   +  +
Sbjct: 9   LDILLARHAALENELLSQ--IS-AERYVQMTRELSELNPVVEAVKNWRAVKTEIAGIDAM 65

Query: 76  ALEEDDCSILQETSDNLQRIK-----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  ++  +           +  +   L     D  +  LE+ AG GG E+
Sbjct: 66  IADPATDAEMRAMAEAERPALGARGDELAQKIRVALLPKDAMDERNVMLEIRAGTGGDEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A  + +K EA+   +G   G K     ++G  AY  LK E GVHR+
Sbjct: 126 SLFAGDLFRMYERFAGLQGWKVEAISASEGTMGGYKEIVAEVRGRGAYAKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++++I   D RI+T RA GAGGQHVN T+SA+
Sbjct: 186 QRVPDTETQGRVHTSAATVAVLP-EAEEVDVDIKTDDLRIETMRAQGAGGQHVNKTESAI 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG+VV  Q  RSQHKN+A A N+LR+++Y+ E Q+    A      K ++G G 
Sbjct: 245 RITHIPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAERQRIN--AARSADRKDQVGSGD 302

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V+ GD L + + A     +
Sbjct: 303 RSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGDALHELIDALTTEHQ 350


>gi|224437763|ref|ZP_03658710.1| peptide chain release factor 1 [Helicobacter cinaedi CCUG 18818]
 gi|313144209|ref|ZP_07806402.1| peptide chain release factor 1 [Helicobacter cinaedi CCUG 18818]
 gi|313129240|gb|EFR46857.1| peptide chain release factor 1 [Helicobacter cinaedi CCUG 18818]
          Length = 354

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 112/345 (32%), Positives = 177/345 (51%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               V R   +++      +  +V +   L +E+  ++  +   K     L        L
Sbjct: 6   LKPIVARYDEISSLLLSQEILSSVKQLTQLSKEQSDIEPIVQSAKMYFSVLEGIADNRAL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K E+E +    L      DS + YLE+ AG GG E+  + 
Sbjct: 66  LEDKELGELAKEELKELESKKAELEEEIKLLLIPKDPNDSKNIYLEIRAGTGGDEAGIFV 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG  +Y  LK E G HR+ R+ 
Sbjct: 126 GDLFKAYCRYADLQKWKVEIISSSENNVGGYKEVIALIKGQGSYSKLKYEGGTHRVQRVP 185

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P   D +E+ I+ SD +ID +R+ G GGQ VNTTDSAVRITH
Sbjct: 186 ETESQGRIHTSAITVAIMP-EVDDVEVNINPSDLKIDVFRSGGHGGQSVNTTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+ V  Q E+SQHKNK +A  +L+A+LYE EL+ +       E+ KT++G G    +
Sbjct: 245 IPTGISVSMQDEKSQHKNKDKALKILKARLYEAELEAQNAQNK--EARKTQVGSGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           IR+Y   P   + D R  +   S  +++ G  LD+ +   +A  +
Sbjct: 303 IRTYNY-PQNRLTDHRIGLTLYSLEEIMLGGLLDECINPLIAHAQ 346


>gi|254521606|ref|ZP_05133661.1| peptide chain release factor 1 [Stenotrophomonas sp. SKA14]
 gi|219719197|gb|EED37722.1| peptide chain release factor 1 [Stenotrophomonas sp. SKA14]
          Length = 360

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 106/323 (32%), Positives = 169/323 (52%), Gaps = 8/323 (2%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS-DN 91
           P +  +    + L RE   L+   + + +      D      +  + D   +  E     
Sbjct: 26  PDVVADNTRFRDLSREFAQLEPVAAALADEARAKADLAAAEGMRADPDLRELADEEIGAA 85

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
             R++   +      +     D  + +LEV AG GG E+  +A  L RMY R+AE++ +K
Sbjct: 86  QTRLQQLEQELALLLVPRDPRDEGNLFLEVRAGTGGDEAAIFAGDLFRMYARYAERQGWK 145

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E    + GE  G K     + G  A+  LK E G HR+ R+   +S  R HTS +++ +
Sbjct: 146 VEIESDNPGEHGGYKEVVARVVGRGAFSRLKFESGTHRVQRVPATESQGRIHTSAATVAI 205

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P  D+  +I I+ +D ++DT+R+SGAGGQHVN T+SA+RITH+PTGVVV+CQ ERSQH 
Sbjct: 206 IPETDEVDDIVINPADLKVDTFRSSGAGGQHVNKTESAIRITHVPTGVVVECQTERSQHA 265

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRT 328
           N+ +A   L+A+L + E Q+++  A   ES + ++G G    +IR+Y   P   + D R 
Sbjct: 266 NRDKAMKRLKAQLLDAERQRQD--AAQAESRRLQVGSGDRSQRIRTYNF-PQGRITDHRV 322

Query: 329 -NIEKTSPSDVLDGDLDDFMKAT 350
             +      ++L GDLD  ++  
Sbjct: 323 EGLTLYDLPNILAGDLDPLLQRL 345


>gi|219684506|ref|ZP_03539449.1| peptide chain release factor 1 [Borrelia garinii PBr]
 gi|219671868|gb|EED28922.1| peptide chain release factor 1 [Borrelia garinii PBr]
          Length = 357

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 125/342 (36%), Positives = 189/342 (55%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++A  ++  L  K +D +L +N  +   +++E  HL+   +   E +  L        +
Sbjct: 6   LNSATSKIKSLEEKLQDINLIKNQKKYSKIIKEYTHLEKINTKKIEYEKILSQINDNKTI 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +ED   + +     L  +  + E  +       L   E DS +  +E+ AG GG E+ 
Sbjct: 66  LEKEDQQEMKELIKQELIDLDKKREDLEHQIKILLLPQDENDSKNIIIEIRAGTGGEEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +AN L  MY +++E++K+KTE +  ++ E  G K     IKG + +  LK E GVHR+ 
Sbjct: 126 LFANNLYSMYIKYSERKKWKTEIINFNETELGGFKEIVFEIKGKDVFKKLKYESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +SN R  TS +++ V P ++++    I+E D RID YR+SGAGGQHVNTTDSAVR
Sbjct: 186 RIPITESNGRLQTSAATVAVLPNIEETEID-INEKDLRIDVYRSSGAGGQHVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++G G  
Sbjct: 245 ITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   + D R NI      + + G+LD  +   
Sbjct: 303 SERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDQLLDPL 343


>gi|294085498|ref|YP_003552258.1| protein chain release factor A [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292665073|gb|ADE40174.1| Protein chain release factor A [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 358

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 116/348 (33%), Positives = 182/348 (52%), Gaps = 14/348 (4%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA---ISFIKEIQDRLCDNLILL 73
           D  + R + +     D      V E     RE   L      I  ++ +   L D  +++
Sbjct: 8   DKVLARRTEVENILNDAASLS-VDEMANFARELSELRPVCEQIELVQRLTSELSDAEVMV 66

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGTESQ 131
             A ++ D   +        + ++  E ++ + L       D+ +A LEV AG GG E+ 
Sbjct: 67  GEAGDDPDMLEMARLEMQELQAQIPDEQQKLQLLLLPKDRDDARNAILEVRAGTGGDEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A+ L  MY R++ K  +K E +E+ +    G K AT  I G + +  LK E GVHR+ 
Sbjct: 127 LFASDLFGMYQRFSAKYGWKFEVMEVSETGIGGYKEATATITGSDVFARLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + +++E+ ESD RID +RASG GGQ VNTTDSAVR
Sbjct: 187 RVPETETGGRIHTSAATVAVLP-EAEDVDVEVVESDLRIDVFRASGPGGQSVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV  Q E+SQHKN+A+A  +LRA+LY+ E  + +         K ++G G  
Sbjct: 246 ITHMPTGIVVSQQDEKSQHKNRAKAMKILRARLYDAERARVQAER--AADRKGQVGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
             +IR+Y   P   V D R N+       V+ G+ LD+ + A ++  +
Sbjct: 304 SERIRTYNF-PQGRVTDHRINLTLYKLDRVIAGEALDEVIDALISEDQ 350


>gi|297379299|gb|ADI34186.1| peptide chain release factor 1 [Helicobacter pylori v225d]
          Length = 352

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 179/345 (51%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L     +  +  ++ +   L +E+  ++      KE    L D     EL
Sbjct: 8   LSSILKRYDELTALLSNAEVISDIKKLTELSKEQSSIEEISVASKEYLSVLEDIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    +  +     D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P   D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++      +  K ++G G    +
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + + R N+   S  +++  G+LD+ +   +A  +
Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348


>gi|56751903|ref|YP_172604.1| peptide chain release factor 1 [Synechococcus elongatus PCC 6301]
 gi|81301012|ref|YP_401220.1| peptide chain release factor 1 [Synechococcus elongatus PCC 7942]
 gi|81561678|sp|Q5N0T6|RF1_SYNP6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361627|sp|Q31L36|RF1_SYNE7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56686862|dbj|BAD80084.1| peptide chain release factor RF-1 [Synechococcus elongatus PCC
           6301]
 gi|81169893|gb|ABB58233.1| bacterial peptide chain release factor 1 (bRF-1) [Synechococcus
           elongatus PCC 7942]
          Length = 368

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 103/348 (29%), Positives = 180/348 (51%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q    L  +  DP +  +  E + + R R  ++  ++  +E + R  +     E+
Sbjct: 10  LQSVEQTFQDLTRRLADPEIATDPREFQRVARMRSSMEELVTTYEEWKQRDAELKGAREI 69

Query: 76  ALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E      L+E +               E  +   L     D  +  LE+ AG GG E+
Sbjct: 70  LRESSGDPELREMAALEVNELEALLVSLEERLKILLLPRDPNDDKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  LLRMY+R+AE + ++ + L    GE  G K A L I+G + Y  LK E GVHR+
Sbjct: 130 SLWAGDLLRMYSRYAESQGWRVKLLSESTGELGGYKEAILEIQGESVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P   D +E+ I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATEAGGRVHTSTATVAIMP-EVDEVEVSIDPKDIELTTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +N+ +A  +LRAKLYE++LQ+++E   +    ++++G G 
Sbjct: 249 DLFHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLQEQQE--AVSSMRRSQVGTGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R  +  +  + VL+G++++ ++A ++  +
Sbjct: 307 RSEKIRTYNYKD-NRATDHRLGLNFS-LNPVLEGEIEEVIQACISKDQ 352


>gi|208434043|ref|YP_002265709.1| peptide chain release factor RF-1 [Helicobacter pylori G27]
 gi|238058715|sp|B5Z680|RF1_HELPG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|208431972|gb|ACI26843.1| peptide chain release factor RF-1 [Helicobacter pylori G27]
          Length = 352

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 178/345 (51%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L D     EL
Sbjct: 8   LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLEDIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    +  +     D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P   D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++      +  K ++G G    +
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + + R N+   S  +++  G+LD+ +   +A  +
Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348


>gi|169838345|ref|ZP_02871533.1| Protein chain release factor B [candidate division TM7 single-cell
           isolate TM7a]
          Length = 243

 Score =  198 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 144/242 (59%), Positives = 183/242 (75%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
            N+A L +++GAGGTE+ DWA ML RMY RWA +  FK E L+   GEEAGIKS TL IK
Sbjct: 1   MNNAILTINSGAGGTEACDWAEMLYRMYDRWANRHNFKVEVLDSLAGEEAGIKSITLNIK 60

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G  AYG+LKGE+GVHRLVRISP+DSN+RRHTSF+++ V P ++D ++I+I   D ++DTY
Sbjct: 61  GNYAYGYLKGEKGVHRLVRISPFDSNARRHTSFAAVNVTPEIEDDVKIDIRPEDLKVDTY 120

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           RASGAGGQHVNTTDSAVRITHIPT  VV CQ ERSQ KN+  A  +L++KL+ELEL+KRE
Sbjct: 121 RASGAGGQHVNTTDSAVRITHIPTNTVVTCQNERSQLKNRETAMKILKSKLFELELEKRE 180

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +     + ++++I WG QIRSYV QPY+MVKD RT  E+ +   V+DGD+D F+   L  
Sbjct: 181 KEMAELKGTESKIEWGSQIRSYVFQPYKMVKDHRTKAEEGNVEKVMDGDIDLFINEYLKY 240

Query: 354 KK 355
            K
Sbjct: 241 AK 242


>gi|219685818|ref|ZP_03540627.1| peptide chain release factor 1 [Borrelia garinii Far04]
 gi|219672651|gb|EED29681.1| peptide chain release factor 1 [Borrelia garinii Far04]
          Length = 357

 Score =  198 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 125/342 (36%), Positives = 189/342 (55%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++A  ++  L  K +D +L +N  +   +++E  HL+   +   E +  L        +
Sbjct: 6   LNSATTKIKSLEEKLQDVNLIKNQKKYSKIIKEYTHLEKINTKKIEYEKILSQINDNKTI 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +ED   + +     L  +  + E  +       L   E DS +  +E+ AG GG E+ 
Sbjct: 66  LEKEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGTGGEEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +AN L  MY +++E++K+KTE +  ++ E  G K     IKG + +  LK E GVHR+ 
Sbjct: 126 LFANNLYSMYIKYSERKKWKTEIINFNETELGGFKEIVFEIKGKDVFKKLKYESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +SN R  TS +++ V P ++++    I+E D RID YR+SGAGGQHVNTTDSAVR
Sbjct: 186 RIPITESNGRLQTSAATVAVLPNIEETEID-INEKDLRIDVYRSSGAGGQHVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++G G  
Sbjct: 245 ITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   + D R NI      + + G+LD  +   
Sbjct: 303 SERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDQLLDPL 343


>gi|225011020|ref|ZP_03701485.1| peptide chain release factor 2 [Flavobacteria bacterium MS024-3C]
 gi|225004825|gb|EEG42782.1| peptide chain release factor 2 [Flavobacteria bacterium MS024-3C]
          Length = 288

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 133/280 (47%), Positives = 188/280 (67%)

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
            +   +       E     Q     +E  +F ++LS E D+  A L++ AGAGGTES DW
Sbjct: 1   MMEFADAGEITEDELKIAYQNTLDVLEDLEFRNMLSEEGDNLSAVLQITAGAGGTESCDW 60

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A ML+RMY  W++K  FK + L   +G+ AG+K+ TL I+G  A+GWLKGE GVHRLVRI
Sbjct: 61  AAMLMRMYMMWSQKAGFKIKELNYQEGDVAGVKTVTLGIEGDFAFGWLKGENGVHRLVRI 120

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
           SP+DSN++RHTSF+S++VYP++DDSIEI I+ +D      R+ GAGGQ+VN  ++ V +T
Sbjct: 121 SPFDSNAKRHTSFASVYVYPLIDDSIEIVINPADISWAFARSGGAGGQNVNKVETKVILT 180

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H PTG+++   + RSQ  N+  A  +L+++LYE+EL+KR+E  +  ESSK +I WG QIR
Sbjct: 181 HHPTGIIIHNSETRSQLDNRENAMKLLKSQLYEIELRKRQEARSEIESSKMKIEWGSQIR 240

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +YVL PY++VKD+R+  E      VLDG LD F+K  L +
Sbjct: 241 NYVLHPYKLVKDVRSGTETGDVDAVLDGHLDPFLKGFLML 280


>gi|13508100|ref|NP_110049.1| peptide chain release factor 1 [Mycoplasma pneumoniae M129]
 gi|2500138|sp|P75420|RF1_MYCPN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|1674166|gb|AAB96123.1| peptide chain release factor 1 [Mycoplasma pneumoniae M129]
          Length = 359

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 107/347 (30%), Positives = 174/347 (50%), Gaps = 14/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+    L      P L    I+A  + +E +H    +   KE +  +   L    +
Sbjct: 11  VEKIVELAEQLEKDLNKPDLTFEQIKA--INKELKHKQPLVVKFKEFKRLIDQALEAEAI 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
               +   +  E    L+R++  V   +       L   E +  +  +E+   AGG ES 
Sbjct: 69  LENNELKELHDEAKKELERVRSVVPEYEEALKLLLLPIDENNQKNVIVELRPAAGGDESC 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L  MY  +   + +K +  E+      G+   +  + G + +  LK E GVHR+ 
Sbjct: 129 IFLADLFNMYRNFCSNKGWKLQINEMIPSSV-GLNFVSFEVNGVDVFAKLKFESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P ++  +E+ I+ +D R+DTYRASGAGGQHVN T+SAVR
Sbjct: 188 RVPATESKGRVHTSTVTVAVLPQLEA-VEVHINPADLRVDTYRASGAGGQHVNRTESAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ+ +SQ  N+  A  MLRAKL+  E  + E+++      K+++G G  
Sbjct: 247 ITHLPTGIVVSCQEGKSQFTNRDTAMKMLRAKLW--EKAQNEQLSTQAGLRKSQVGSGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +     + ++ GDLD+ ++A  A +K
Sbjct: 305 AEKIRTYNY-PQNRVTDHRIKLTVNKLNTIILGDLDEIIEALQADEK 350


>gi|51598456|ref|YP_072644.1| peptide chain release factor 1 [Borrelia garinii PBi]
 gi|61214604|sp|Q662G9|RF1_BORGA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|51573027|gb|AAU07052.1| peptide chain release factor 1 [Borrelia garinii PBi]
          Length = 357

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 123/342 (35%), Positives = 189/342 (55%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++A  ++  +  K +D +L +N  +   +++E  +L+   +   E +  L        +
Sbjct: 6   LNSATSKIKLIEEKLQDINLIKNQKKYSKIIKEYTYLEKINTKKIEYEKILSQINDNKTI 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +ED   + +     L  +  + E  +       L   E DS +  +E+ AG GG E+ 
Sbjct: 66  LEKEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGTGGEEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +AN L  MY +++E++K+KTE +  ++ E  G K     IKG + +  LK E GVHR+ 
Sbjct: 126 LFANNLYSMYIKYSERKKWKTEIINFNETELGGFKEIVFEIKGKDVFKKLKYESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +SN R  TS +++ V P ++++    I+E D RID YR+SGAGGQHVNTTDSAVR
Sbjct: 186 RIPITESNGRLQTSAATVAVLPNIEETEID-INEKDLRIDVYRSSGAGGQHVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++G G  
Sbjct: 245 ITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   + D R NI      + + G+LD  +   
Sbjct: 303 SERIRTYNF-PQNRITDHRANITLYKLEEFMQGELDPLLDPL 343


>gi|281358665|ref|ZP_06245143.1| peptide chain release factor 1 [Victivallis vadensis ATCC BAA-548]
 gi|281314895|gb|EFA98930.1| peptide chain release factor 1 [Victivallis vadensis ATCC BAA-548]
          Length = 362

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 172/344 (50%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN----LI 71
            +N   R + L     DP ++    E + + +E + L+       + +  L +      +
Sbjct: 10  IENLHGRFAELEAALADPAIYARGAECRRVSQEHRKLETLFRKFDDWRKALAELADNREM 69

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           L      E    I  + +D  +R +      Q   L     D+ +  + +   AGG E+ 
Sbjct: 70  LTAETDAELRELIAADIADLEERAQKLEADIQISLLPPDPNDAKNIIVGIKPAAGGDEAA 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L R Y ++AEK+ ++ E L+  D E  GIK  +  + G   Y  +K E GVHR+ 
Sbjct: 130 LFAGELFRAYMKFAEKKGWRIEVLDQTDTELGGIKDVSFSLSGDEVYSLMKYESGVHRVQ 189

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P   + +E++I   D R D +R+SG GGQ VNTTDSAVR
Sbjct: 190 RVPATEAGGRIHTSTVTVAVMP-EAEEVELDIRPEDLRFDVFRSSGPGGQCVNTTDSAVR 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           +THIPTG+ V  QQE+SQH+NK  A  +L A+L  LE +++EE        ++++G G  
Sbjct: 249 VTHIPTGIAVASQQEKSQHRNKEIALRILYARL--LEHKQQEEADKQAADKRSQVGTGDR 306

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
             +IR+Y   P   V D R N+       +++G+LD  +   L 
Sbjct: 307 SERIRTYNF-PQNRVTDHRFNVNTFDLPKLMEGELDLILDQILM 349


>gi|195941927|ref|ZP_03087309.1| peptide chain release factor 1 [Borrelia burgdorferi 80a]
          Length = 357

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 122/347 (35%), Positives = 190/347 (54%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   ++  +  K +D +L ++  +   +++E  +L+   +   E +  L        +
Sbjct: 6   LNSTTSKIKLIEEKLQDINLIKDQKKYSKIIKEYTYLEKINTKKIEYEKILSQINDTKTI 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +ED   + +     L  +  + E  +       L   E DS +  +E+ AG GG E+ 
Sbjct: 66  LEKEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGTGGEEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +AN L  MY +++EK+K+KTE +  ++ E  G K     IKG + +  LK E GVHR+ 
Sbjct: 126 LFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +SN R  TS +++ V P ++++    I+E D RID YR+SGAGGQHVNTTDSAVR
Sbjct: 186 RIPITESNGRLQTSAATVAVLPNIEETEID-INEKDLRIDVYRSSGAGGQHVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++G G  
Sbjct: 245 ITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R NI      + + G+LD  +   +   +
Sbjct: 303 SERIRTYNF-PQNRITDHRANITLYRLEEFMQGELDPLLDPLMIALQ 348


>gi|300858256|ref|YP_003783239.1| peptide chain release factor RF-1 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300685710|gb|ADK28632.1| peptide chain release factor RF-1 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302205977|gb|ADL10319.1| Peptide chain release factor 1 [Corynebacterium pseudotuberculosis
           C231]
 gi|302330530|gb|ADL20724.1| Peptide chain release factor 1 [Corynebacterium pseudotuberculosis
           1002]
 gi|308276212|gb|ADO26111.1| Peptide chain release factor RF-1 [Corynebacterium
           pseudotuberculosis I19]
          Length = 356

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 176/347 (50%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V     +  +  DP    + +  + L +    L   I+   ++     D  +  E+
Sbjct: 7   VDDIVSEYQGIEAQMADPETMGDQMLFRKLSKRYSELQPIINVNNKLVQARDDYEVAKEM 66

Query: 76  -ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
              + +           +  ++ ++             D +D  +EV AGAGG E+  +A
Sbjct: 67  AHEDHEFQEEAARLETEVVVLEEQLAD---LLAPRDPHDGDDIVMEVKAGAGGEEAALFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHR 189
             L+RMY R+A+K  F  E L+  + +  G+K  TL I+        A+   K E GVHR
Sbjct: 124 GELVRMYQRYADKHGFAIEVLDSSESDLGGVKDMTLSIRSKTPSRDGAWSVFKFEGGVHR 183

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R  TS + + VYP  D+  EIEI + D RID YR+SG GGQ VNTTDSA
Sbjct: 184 VQRVPVTESQGRIQTSAAGVLVYPEPDEVAEIEIDDKDLRIDVYRSSGKGGQGVNTTDSA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308
           VRITH+PTG+VV CQ+ERSQ +NKA+A  +L A+L  +  ++ E  A  G +++   +  
Sbjct: 244 VRITHLPTGLVVTCQKERSQIQNKARAMQVLAARLQSMAEEQAEAEAAEGRAAQIRTMDR 303

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R   +  +   VL+G+LDD   A  A ++
Sbjct: 304 SERIRTYNW-PENRISDHRIGFKANNLDSVLNGELDDLFTALRAAER 349


>gi|241116888|ref|XP_002401657.1| protein releasing factor, putative [Ixodes scapularis]
 gi|215493201|gb|EEC02842.1| protein releasing factor, putative [Ixodes scapularis]
          Length = 358

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 123/347 (35%), Positives = 184/347 (53%), Gaps = 16/347 (4%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           +    + +   L  K     +  +  E     +E   L + ++ IKE      +      
Sbjct: 9   NLAKILDKYENLGKKLSS-GIMGD--EFVKASKEYAELKDVVAKIKEYNKAKSELEEANN 65

Query: 75  LALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LE    +   E  ++                +   L   +ADS  A +EV AG+GG E
Sbjct: 66  FKLEVGLDNATLEMIEDEIHTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGGEE 125

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A +L  MY R+AE + ++ E L I D    G K A+ LIKG + +  LK E GVHR
Sbjct: 126 AALFAAVLFNMYQRYAELKGWRFEILAISDMGIGGYKEASALIKGKDVFSKLKFESGVHR 185

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P   + ++I+I + D +IDTYRASGAGGQHVNTTDSA
Sbjct: 186 VQRVPETESQGRIHTSAATVAVLP-EAEEVDIKIEDKDLKIDTYRASGAGGQHVNTTDSA 244

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPT + V  Q E+SQHKNKA+A  +LRA++YE E   R++     +S + ++G G
Sbjct: 245 VRITHIPTSITVALQDEKSQHKNKAKALKILRARIYEEER--RKKEQERADSRRGQVGSG 302

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
               +IR+Y   P   V D R N+      +V+ +G LD+F++A +A
Sbjct: 303 DRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 348


>gi|149185458|ref|ZP_01863774.1| protein chain release factor A [Erythrobacter sp. SD-21]
 gi|148830678|gb|EDL49113.1| protein chain release factor A [Erythrobacter sp. SD-21]
          Length = 355

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 112/344 (32%), Positives = 173/344 (50%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R + L  +     L  +  E     R+   L+       E++    +   L ++
Sbjct: 8   LDQIAHRFAELEARMASGTLEGD--EFVQASRDYAELEPVAKVAAEVKAAREEIASLEDM 65

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +  ++ +E    LQ+             L    AD+  A LE+ AG GG E+  +A
Sbjct: 66  LADPEMKAMAEEELAELQKRLPAAERQLAIAMLPRDSADNKPAMLEIRAGTGGDEAALFA 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+A +  +K E + ++  E  G K     + GPN +  LK E GVHR+ R+ 
Sbjct: 126 GDLFRMYERYAAEMGWKVEPVSMNASEVGGFKEIVASVTGPNVFAKLKFESGVHRVQRVP 185

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   D +++++  ++ +IDTYRASGAGGQHVNTTDSA+RITH
Sbjct: 186 ETESGGRIHTSAATVAVLP-EPDEVDVQLDPTELKIDTYRASGAGGQHVNTTDSAIRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG VV CQ  RSQHKNK +A  +LR +LY+ + +         E+ K  +G G    +
Sbjct: 245 LPTGTVVTCQDGRSQHKNKEKAMQVLRTRLYDAQRE--ATQGAEAEARKAMVGSGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAIK 354
           IR+Y   P   V D R  +       ++ G  L + ++A +A  
Sbjct: 303 IRTYNY-PQGRVTDHRIGLTLQKLPQIIAGPGLAELVEALIAED 345


>gi|67923568|ref|ZP_00517041.1| Peptide chain release factor 1 [Crocosphaera watsonii WH 8501]
 gi|67854594|gb|EAM49880.1| Peptide chain release factor 1 [Crocosphaera watsonii WH 8501]
          Length = 370

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 99/348 (28%), Positives = 178/348 (51%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q    L  +  DP +  N  E + + + R  L+  ++  +  Q+   +     ++
Sbjct: 10  LQSVEQTYQELTRRLADPDIATNPDELQRVAKLRSSLEETVNTYQTWQETQEELKGAKQI 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130
             E      ++E +        E   +     +   L     D  +  LE+ AG GG E+
Sbjct: 70  LKEAGSDPEMREMASMEVSELEENIEQLEERLKILLLPRDPNDDKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY+R+AE +++  + +     +  G K A L I G   Y  LK E GVHR+
Sbjct: 130 SIWAGDLVRMYSRYAESQRWNVKLVSESLADMGGFKEAILEITGEQVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P   D +EIEI   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPVTEAGGRVHTSTATVAIMP-EVDDVEIEIDPKDIEMTTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +N+ +A  +LRAKLYE++L++++E   +    ++++G G 
Sbjct: 249 DLMHKPTGIRIFCTEERSQLQNRERAMQILRAKLYEMKLREQQE--AVSSMRRSQVGTGS 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R + +  +    L+GD+D+ +++ ++  +
Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLS-QNFALVGALEGDIDNIIESCISQDQ 352


>gi|145352937|ref|XP_001420790.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581025|gb|ABO99083.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 343

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 93/334 (27%), Positives = 165/334 (49%), Gaps = 13/334 (3%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             DP +  +  E + L +    L + +      ++ + +      +A +      +   +
Sbjct: 1   MADPSVTGDPKEFQKLSKALGELTSVVEQYARYKECMKEISEARAMAKDAAGDDEMVAMA 60

Query: 90  DNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
                          E++          D  +  LE+ AG GG E+  WA  L RMY R+
Sbjct: 61  KEEIDALTTESDALVETMTLALLPKDPLDEKNIMLEIRAGTGGDEAGIWAGDLYRMYMRF 120

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           AE+  ++T  +  +  +  G K   + IKG + Y  LK E GVHR+ R+   ++  R  T
Sbjct: 121 AEREGWQTSVVTNNPADAGGYKEIVVEIKGDDVYSSLKWEAGVHRVQRVPATETQGRIQT 180

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           S +++ V P   D +E++I ++D  I T R+ GAGGQ+VN  ++A+ + H PTG+ V C 
Sbjct: 181 STATVAVMP-EVDEVEVKIDDNDLDISTARSGGAGGQNVNKVETAIDLMHKPTGIRVFCT 239

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQ 321
           +ER+Q KN+ +A  +LRAKL+EL+L+++     + +  K+++G G    +IR+Y  +   
Sbjct: 240 EERTQMKNRIRAMQILRAKLFELQLEEQR--KAVSDKRKSQVGSGSRSEKIRTYNWKD-S 296

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            V D R     +   + LDGD+   +    A+++
Sbjct: 297 RVSDHRIGANFS-LQNFLDGDIKGAIGGMQALEQ 329


>gi|116072171|ref|ZP_01469439.1| peptide chain release factor 1 [Synechococcus sp. BL107]
 gi|116065794|gb|EAU71552.1| peptide chain release factor 1 [Synechococcus sp. BL107]
          Length = 365

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 97/348 (27%), Positives = 164/348 (47%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLIL 72
              A      L  +  DP +  +    + + RER  L+  +     +++++    D   L
Sbjct: 10  LQTATASFRSLERQLADPDVANDPKRLETIARERSRLEPLVLDFEALQKLEQEQVDAREL 69

Query: 73  LELALEEDDCSILQETSDNL--QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           L  +  +     L +        +    ++      L     D     LE+ AGAGG E+
Sbjct: 70  LRESRSDAAMQELAQNELCELEAQHAALLQRLTLALLPRDPRDDRSVMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+ +K  +  + L   + +  G +   + +KG + +  LK E GVHR+
Sbjct: 130 CIWAGDLARMYERYGQKLGWSVQQLSCTEADLGGYRELIVSVKGASVFSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D++E+++   D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADAVEVQLDPKDLEISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C Q+RSQ +N+ +A  +LRAKL  LE +            ++++G G 
Sbjct: 249 DLLHKPTGIRVFCTQQRSQLQNRERALEILRAKL--LERELAAAAERESSDRRSQVGSGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R     +    VL G L+D + A +A ++
Sbjct: 307 RSEKIRTYNYKD-NRTTDHRLGRNFS-LEPVLQGQLEDLIGACIAEEQ 352


>gi|294155813|ref|YP_003560197.1| peptide chain release factor 1 [Mycoplasma crocodyli MP145]
 gi|291600475|gb|ADE19971.1| peptide chain release factor 1 [Mycoplasma crocodyli MP145]
          Length = 358

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 108/346 (31%), Positives = 174/346 (50%), Gaps = 11/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72
             N   + + +     DP++  ++ +   + +E   ++  +         +     +  +
Sbjct: 9   LTNIKNKYNEMQEMLNDPNVINDIKKYTKINKELNSIEEIVKCFNHYLNAEQNFKSSKEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L    EE       E + + + +    E  +   L   + D  D  +E+   AGG E+  
Sbjct: 69  LSEKDEEMVELAKIEITQSEEIMTKLTEELKILILPKDKNDDKDVIVEIRGAAGGDEANI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY +W+++   K + L+ +  E  G    T  I G  AY  LK E GVHR+ R
Sbjct: 129 FAGDLFRMYQKWSDQNDMKLKVLDENRAEAGGFTLITFSILGDKAYSKLKFESGVHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           I   ++  R HTS +++ V P +DD IEIE+   D RID +R+SG GGQ VNTTDSAVRI
Sbjct: 189 IPVTETKGRVHTSTATVTVMPEIDDDIEIEVKSEDIRIDVFRSSGNGGQSVNTTDSAVRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH  +G+VV CQ+ +SQ +NK  A  +L++KLY+LEL   ++        +   G G   
Sbjct: 249 THASSGIVVSCQEGKSQIQNKEIAMRILKSKLYDLEL---KKKEEEESGYRKLAGSGFRS 305

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R +   +  S V++G L+  + A LA+++
Sbjct: 306 EKIRTYNY-PQDRVTDHRISYSTS-LSPVMEGKLNSIIDALLAMEQ 349


>gi|242069313|ref|XP_002449933.1| hypothetical protein SORBIDRAFT_05g025920 [Sorghum bicolor]
 gi|241935776|gb|EES08921.1| hypothetical protein SORBIDRAFT_05g025920 [Sorghum bicolor]
          Length = 412

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 101/348 (29%), Positives = 180/348 (51%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+A +    ++ +  DP +  +  E + L +    LD  ++  ++ +D          L
Sbjct: 54  LDSAEKAWKEMSVRLADPDIVSDPSEYQKLAQSVSELDQVVTTYRQFKDCERQLEETKAL 113

Query: 76  ALEEDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E +D   + E           ++    E  +   L S   DS +  LEV AGAGG E+
Sbjct: 114 EKENEDDPDMSEMITSELEALSNQLAELEEKLKLLLLPSDPLDSRNILLEVRAGAGGDEA 173

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY ++ E+  +K + +   + +  G K+  + +KG   Y  LK E GVHR+
Sbjct: 174 GIWAGDLVRMYQKYCERNNWKFKPVSCSEADMGGYKTYVMEVKGKQVYSKLKFESGVHRV 233

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P   D +++ I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 234 QRVPLTETMGRVHTSTATVAIMP-EADEVDVVIDPKDIELKTARSGGAGGQNVNKVETAV 292

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +NK +A+ +LRAKLYE++L++++E  +I    K ++G G 
Sbjct: 293 DLIHKPTGIRIFCTEERSQLQNKERAFQLLRAKLYEIKLREQQE--SIRNQRKMQVGTGA 350

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R  +     +  L GD++  +++   +++
Sbjct: 351 RSEKIRTYNYKD-NRVTDHRLKM-NYELTGFLLGDIESAVQSCATLEQ 396


>gi|315122704|ref|YP_004063193.1| peptide chain release factor 1 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313496106|gb|ADR52705.1| peptide chain release factor 1 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 357

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 114/347 (32%), Positives = 174/347 (50%), Gaps = 18/347 (5%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           N   R S +  +  + P +         L  E   +   IS I   + +  +   L  + 
Sbjct: 11  NLKNRFSEIELRMSESPSV----DVYIKLTEEYAAISPIISKIDIYEKKKGEEQDLRTII 66

Query: 77  LEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
            ++D    +++ +        + IK          L     D     LE+ AG GG+E+ 
Sbjct: 67  DDQDSDLGIRDLAKAEIGEVEKEIKALEYEISCLLLPKDTDDDKSCILEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L RMY R+A  +K+K E L   D ++ G K     I G   +  +K E GVHR+ 
Sbjct: 127 LFVGDLFRMYERYATYQKWKVEILSSSDNDDGGYKEIVATISGNGVFYRMKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS +++ V P   + I++ I+  D RIDT RASG+GGQHVNTTDSAVR
Sbjct: 187 RVPATEASGRVHTSAATVAVLP-EAEEIDVAIATEDIRIDTMRASGSGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG++V    E+SQH+N+ QA  +LRA+LY++E ++        E+ K +IG G  
Sbjct: 246 ITHIPTGIMVTSS-EKSQHQNRLQAMKVLRARLYDIERKRMAHER--SENRKAQIGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R N+       VL G LD+ + A L   +
Sbjct: 303 SERIRTYNF-PQGRITDHRINLTLYKLEYVLQGYLDEIVNALLTAHQ 348


>gi|239947714|ref|ZP_04699467.1| peptide chain release factor 1 [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921990|gb|EER22014.1| peptide chain release factor 1 [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 355

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 123/347 (35%), Positives = 184/347 (53%), Gaps = 16/347 (4%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           +    + +   L  K     +  +  E     +E   L + ++ IKE      +      
Sbjct: 6   NLAKILDKYENLGKKLSS-GIMGD--EFVKASKEYAELKDVVAKIKEYNKAKSELEEANN 62

Query: 75  LALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LE    +   E  ++                +   L   +ADS  A +EV AG+GG E
Sbjct: 63  FKLEVGLDNATLEMIEDEIHTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGGEE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A +L  MY R+AE + ++ E L I D    G K A+ LIKG + +  LK E GVHR
Sbjct: 123 AALFAAVLFNMYQRYAELKGWRFEILAISDMGIGGYKEASALIKGKDVFSKLKFESGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P   + ++I+I + D +IDTYRASGAGGQHVNTTDSA
Sbjct: 183 VQRVPETESQGRIHTSAATVAVLP-EAEEVDIKIEDKDLKIDTYRASGAGGQHVNTTDSA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPT + V  Q E+SQHKNKA+A  +LRA++YE E   R++     +S + ++G G
Sbjct: 242 VRITHIPTSITVALQDEKSQHKNKAKALKILRARIYEEER--RKKEQERADSRRGQVGSG 299

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
               +IR+Y   P   V D R N+      +V+ +G LD+F++A +A
Sbjct: 300 DRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345


>gi|183222627|ref|YP_001840623.1| peptide chain release factor 1 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189912661|ref|YP_001964216.1| peptide chain release factor 1 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|238687790|sp|B0SH84|RF1_LEPBA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238687821|sp|B0SQV0|RF1_LEPBP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|167777337|gb|ABZ95638.1| Peptide chain release factor 1 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167781049|gb|ABZ99347.1| Peptide chain release factor 1 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 353

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 102/351 (29%), Positives = 160/351 (45%), Gaps = 15/351 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D      ++   +  +             K L +ER  L    +   E      D   
Sbjct: 1   MIDRLKKIQEKYLRIEDELAKATA---SDTLKNLSKERSRLTPVYTKADEYLKITKDCQD 57

Query: 72  LLELALEEDDCSILQE----TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
              L   E+D  +         +  ++++   +  +   L           +E+ AG GG
Sbjct: 58  AKSLLESENDPDMHSMLKSEIEEGEKKLEELAKELEIMLLPPDPNSGKSILVEIRAGTGG 117

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            ES  +   L RMY ++A+K+  + E +++      G K     +    AY   K E G 
Sbjct: 118 EESGLFCADLFRMYNKYADKKGLRVEIIDMSQTGIGGYKEIVFSLDDDKAYDLFKFESGT 177

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS  ++ + P  ++     I ESD RID YR+SGAGGQHVNTTD
Sbjct: 178 HRVQRIPETESGGRIHTSAVTVAILPEAEEKEVE-IKESDLRIDVYRSSGAGGQHVNTTD 236

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG+VV  Q+ERSQ KN+ +A  +LRA++ +   +      +     K ++G
Sbjct: 237 SAVRITHIPTGIVVASQEERSQIKNRDKAMRVLRARIADQAAE--TAKLSADALKKAQVG 294

Query: 308 WG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            G    +IR+Y   P     D R      +   +++GDLD+ + A +   +
Sbjct: 295 SGDRSERIRTYNF-PQGRCTDHRIGFTSHNLPAIMEGDLDELIDALIQEDR 344


>gi|148258772|ref|YP_001243357.1| peptide chain release factor 1 [Bradyrhizobium sp. BTAi1]
 gi|146410945|gb|ABQ39451.1| bacterial peptide chain release factor 1 (bRF-1) [Bradyrhizobium
           sp. BTAi1]
          Length = 361

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 169/344 (49%), Gaps = 16/344 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72
            D  +   + L  +        N      + RE   L+  I  +K  +     L D   L
Sbjct: 9   LDVLLAHHASLEAELLGQ---VNSDRYVQITRELAELNPLIEAVKAYRAGVKELADTEAL 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTES 130
           +     + +   + E   +    +     ++    L  +      +  LE+ AG GG E+
Sbjct: 66  IADPATDAEMRAMAEAERDELIARRGELEQKIRVALLPKDAMDDRNVVLEIRAGTGGDEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A  + +K E +   +G   G K     ++G  A+  LK E GVHR+
Sbjct: 126 SLFAGDLFRMYERFASLQGWKVEVISASEGTVGGYKEIIAEVQGRGAFAKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++++I + D RI+T RA GAGGQHVN T+SA+
Sbjct: 186 QRVPDTETQGRIHTSAATVAVLP-EVEEVDVDIKQDDLRIETMRAQGAGGQHVNKTESAI 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG+VV  Q  RSQHKN+A A N+LR+++Y+ E QK +  A      K ++G G 
Sbjct: 245 RITHIPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAERQKVD--AARSAERKEKVGSGD 302

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
              +IR+Y   P   V D R N+       V+ G+ L + + A 
Sbjct: 303 RSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGEALGELIDAL 345


>gi|301633339|gb|ADK86893.1| peptide chain release factor 1 [Mycoplasma pneumoniae FH]
          Length = 359

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 107/347 (30%), Positives = 174/347 (50%), Gaps = 14/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+    L      P L    I+A  + +E +H    +   KE +  +   L    +
Sbjct: 11  VEKIVELAEQLEKDLNKPDLTFEQIKA--INKELKHKQPLVVKFKEFKRLIDQALEAEAI 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
               +   +  E    L+R++  V   +       L   E +  +  +E+   AGG ES 
Sbjct: 69  LENNELKELHDEAKKELERVRSVVPEYEEALKLLLLPIDENNQKNVIVELRPAAGGDESC 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L  MY  +   + +K +  E+      G+   +  + G + +  LK E GVHR+ 
Sbjct: 129 IFLADLFNMYRNFCTNKGWKLQINEMIPSSV-GLNFVSFEVNGVDVFAKLKFESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P ++  +E+ I+ +D R+DTYRASGAGGQHVN T+SAVR
Sbjct: 188 RVPATESKGRVHTSTVTVAVLPQLEA-VEVHINPADLRVDTYRASGAGGQHVNRTESAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQ+ +SQ  N+  A  MLRAKL+  E  + E+++      K+++G G  
Sbjct: 247 ITHLPTGIVVSCQEGKSQFTNRDTAMKMLRAKLW--EKAQNEQLSTQAGLRKSQVGSGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   V D R  +     + ++ GDLD+ ++A  A +K
Sbjct: 305 AEKIRTYNY-PQNRVTDHRIKLTVNKLNTIILGDLDEIIEALQADEK 350


>gi|255692994|ref|ZP_05416669.1| peptide chain release factor 2 [Bacteroides finegoldii DSM 17565]
 gi|260621306|gb|EEX44177.1| peptide chain release factor 2 [Bacteroides finegoldii DSM 17565]
          Length = 319

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 123/315 (39%), Positives = 189/315 (60%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M+  + L   I    E++    +  +  +     ++    ++      + +  VE  + +
Sbjct: 1   MKLVKDLQKWIDGYNEVKTLADELELAFDFYK--EELVTEEDVDTAYAKAREAVEALELK 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  EAD  D  L++++GAGGTESQDWA+ML+RMY R+AE   +K     + +G+EAGI
Sbjct: 59  NMLRDEADQMDCVLKINSGAGGTESQDWASMLMRMYLRYAETNGYKATIANLQEGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T+ I+G  AYG+LKGE GVHRLVR+SPY++  +R TSF+S++V P+VDDSIE+ I  
Sbjct: 119 KTCTINIEGDFAYGYLKGENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDSIEVNIET 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIP--------TGVVVQCQQERSQHKNKAQAW 277
           +    DT+R+ GAGGQ+VN  +S VR+ +            ++++  + R Q KN+  A 
Sbjct: 179 ARISWDTFRSGGAGGQNVNKVESGVRLRYQYKDPYTGEEEEILIENTETRDQPKNRENAM 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
             LR+ LY+ ELQ R       E+ K +I WG QIRSYV    + VKD RTN + +  + 
Sbjct: 239 RQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNG 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DG ++DF+KA L 
Sbjct: 298 VMDGKIEDFIKAYLM 312


>gi|111114896|ref|YP_709514.1| peptide chain release factor 2 [Borrelia afzelii PKo]
 gi|216263773|ref|ZP_03435767.1| peptide chain release factor 2 [Borrelia afzelii ACA-1]
 gi|110890170|gb|ABH01338.1| peptide chain release factor 2 [Borrelia afzelii PKo]
 gi|215979817|gb|EEC20639.1| peptide chain release factor 2 [Borrelia afzelii ACA-1]
          Length = 269

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 137/267 (51%), Positives = 186/267 (69%), Gaps = 1/267 (0%)

Query: 88  TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
                  ++ + +     S    E D+NDA+L +H+GAGGTE+ DW  ML RMY+R+AE+
Sbjct: 1   MEIEFNILEKQYKDLLTISYFKEELDANDAFLTIHSGAGGTEACDWVAMLYRMYSRYAER 60

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           +K+KTE +++ + E  GIKS T+ IKG  AYG LK E G+HRL+RISP+D+  +RHTSF+
Sbjct: 61  KKYKTELIDLLEAE-GGIKSVTIEIKGEYAYGLLKSEVGIHRLIRISPFDAAKKRHTSFA 119

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           S+++ PV+D+ IEI I   D RIDTYRASGAGGQHVN T SAVRITHI TG+V Q Q +R
Sbjct: 120 SVFIDPVIDEKIEIIIKPEDIRIDTYRASGAGGQHVNKTSSAVRITHIETGIVTQSQSDR 179

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           SQHKNK  A  +L+++LYE    K +E     + +K EI WG QIRSYV QPY +VKD R
Sbjct: 180 SQHKNKDMAMKVLKSRLYEYYKNKEDEKNKSKQDTKKEISWGNQIRSYVFQPYNLVKDHR 239

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIK 354
           T  E ++ + V+DG++D+F++  L  K
Sbjct: 240 TKFENSNITSVMDGNIDNFIEEYLKWK 266


>gi|115486501|ref|NP_001068394.1| Os11g0657100 [Oryza sativa Japonica Group]
 gi|77552370|gb|ABA95167.1| Peptide chain release factor 1, putative, expressed [Oryza sativa
           Japonica Group]
 gi|113645616|dbj|BAF28757.1| Os11g0657100 [Oryza sativa Japonica Group]
 gi|215686469|dbj|BAG87730.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215694739|dbj|BAG89930.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218186139|gb|EEC68566.1| hypothetical protein OsI_36894 [Oryza sativa Indica Group]
 gi|222616368|gb|EEE52500.1| hypothetical protein OsJ_34701 [Oryza sativa Japonica Group]
          Length = 416

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 103/350 (29%), Positives = 184/350 (52%), Gaps = 17/350 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+A +    ++ +  DP +  +  E + L +    LD  +S  ++ +D          L
Sbjct: 58  LDSAEKAWKEMSVRLADPDIVSDPSEYQKLAQSVAELDQVVSTYRQFKDCEKQIEETKVL 117

Query: 76  ALEEDDCSIL-----QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E +D   +      E      +++   E  +   L +   D+ +  LEV AGAGG E+
Sbjct: 118 QKENEDDPDMAEMIDSEMESLSNQLEELEEKLKLLLLPNDPLDARNILLEVRAGAGGDEA 177

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY ++ E+  +K + +   + E+ G K+  + +KG   Y  LK E GVHR+
Sbjct: 178 GIWAGDLVRMYQKYCERNSWKFKPVSSSEAEKGGFKTYVMEVKGKQVYSKLKFESGVHRV 237

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P   D +++ I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 238 QRVPQTETMGRVHTSTATVAIMP-EADEVDVVIDPKDIELKTARSGGAGGQNVNKVETAV 296

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +N+ +A+ +LRAKLYE++L++++E  +I    K ++G G 
Sbjct: 297 DLIHKPTGIRIFCTEERSQLQNRERAFQLLRAKLYEIKLREQQE--SIRNQRKLQVGTGA 354

Query: 310 --RQIRSYVLQPYQMVKDLR--TNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R   N E T     L GD++  +++  ++++
Sbjct: 355 RSEKIRTYNYKD-NRVTDHRLKMNFELT---GFLMGDIESAVQSCSSMEQ 400


>gi|22331914|ref|NP_191850.2| APG3 (ALBINO AND PALE GREEN); translation release factor/
           translation release factor, codon specific [Arabidopsis
           thaliana]
 gi|19699096|gb|AAL90914.1| AT3g62910/T20O10_10 [Arabidopsis thaliana]
 gi|21928033|gb|AAM78045.1| AT3g62910/T20O10_10 [Arabidopsis thaliana]
 gi|34392768|dbj|BAC82693.1| Chloroplast Release Factor 1 [Arabidopsis thaliana]
 gi|332646889|gb|AEE80410.1| Peptide chain release factor 1 [Arabidopsis thaliana]
          Length = 422

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 105/355 (29%), Positives = 184/355 (51%), Gaps = 16/355 (4%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            +  +   ++  +    L+ K  DP +  N  E + L +    LD  ++  +  +D    
Sbjct: 57  LIRKM---ESVEKTWKELSVKLADPDVVSNQSEYQKLAQSMSELDEVVTVFRRFKDCEKQ 113

Query: 69  NLILLELALEEDDCSILQETS-----DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            L    LA E  D   + E          + I+   +  +   L S   D+ +  LEV A
Sbjct: 114 LLESKVLAKEAGDDEDMAEMIGSEINSLTKEIEELEKQLKVLLLPSDPLDARNILLEVRA 173

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G GG E+  W   L+RMY R++E+  +K   +   + E  G K+  + IKG   Y  LK 
Sbjct: 174 GTGGDEAAIWTGDLVRMYQRYSERSSWKFSMVSCSEAEHGGYKTCVMEIKGNRVYSKLKY 233

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHR+ R+   ++  R HTS +++ + P   D +E+ I   D  + + R+ GAGGQ+V
Sbjct: 234 ESGVHRVQRVPQTETQGRVHTSTATVAIMP-EADEVEVVIDPKDIELTSARSGGAGGQNV 292

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N  ++A+ + H P+G+ + C +ER+Q +NKA+A+ +LRAKLYE+++++++E   I    K
Sbjct: 293 NKVETAIDLFHKPSGIRIFCTEERTQIRNKARAFQLLRAKLYEIKVREQQE--KIRNERK 350

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +++G G    +IR+Y  +    V D R  +   + +  LDG L+D ++A  A+++
Sbjct: 351 SQVGTGARSEKIRTYNYKD-SRVTDHRLKM-NFALTTFLDGALEDAVQACAALEQ 403


>gi|300781422|ref|ZP_07091276.1| peptide chain release factor RF1 [Corynebacterium genitalium ATCC
           33030]
 gi|300533129|gb|EFK54190.1| peptide chain release factor RF1 [Corynebacterium genitalium ATCC
           33030]
          Length = 360

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 180/346 (52%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V     +  +  DP +  +    + L +    L   I+   E+     D     E+
Sbjct: 10  VDDYVSEYQGIQAQMGDPDVVGDQDLFRKLSKRYAQLQPIINVNNELTQAREDLEAAQEM 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E+ + +      +       E            E D++D  +E+ AGAGG E+  +A 
Sbjct: 70  AAEDKEFAEEATRLEGEIVRLEEELADLL--APRDEHDADDVIMEIKAGAGGEEAALFAG 127

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190
            L RMY ++AEK     + L++ + +  G+K  T+ +K        A+  LK E GVHR+
Sbjct: 128 DLARMYQKYAEKAGLSWDVLDLSESDLGGVKDMTVAVKAKNPSRDGAWSMLKFEGGVHRV 187

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            RI   +S  R  TS + + VYP  ++   ++I E D R+D YR+SG GGQ VNTTDSAV
Sbjct: 188 QRIPVTESQGRIQTSAAGVLVYPEPEEVEAVDIDEKDLRVDVYRSSGKGGQGVNTTDSAV 247

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG+VV CQ+ERSQ +N+A+A  +L+A+L +LE +K E  A  G +S+   +   
Sbjct: 248 RITHLPTGIVVTCQKERSQIQNRARAMQVLQARLDQLEREKAEAEAAEGRASQVRTMDRS 307

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R N +  +   VLDG++DD + A    ++
Sbjct: 308 ERIRTYNW-PENRISDHRINYKSNNLDAVLDGNMDDIITALQTHER 352


>gi|300933612|ref|ZP_07148868.1| peptide chain release factor 1 [Corynebacterium resistens DSM
           45100]
          Length = 353

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 178/346 (51%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +     L  +  DP L  +   A+ + +    L   I   ++++    D+    E+
Sbjct: 2   VDDILAEYQGLEAQLGDPELHNDPAAARKVGKRFSELQPIIQTHQQLEQAREDHEAAAEM 61

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E+ + +   +  +       E              D +D  +E+ +GAGG E+  +A 
Sbjct: 62  ASEDAEFAEEAKRLETEIAELEEKLTDLL--APRDPHDGDDIVMEIKSGAGGEEAALFAG 119

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-----YGWLKGEQGVHRL 190
            L RMY R+AE+  F TE L++++ +  G+K  T+ I+         +   K E GVHR+
Sbjct: 120 ELARMYQRYAERHGFATEVLDLNETDLGGVKDMTMSIRSKQPSRDGAWAEFKFEGGVHRV 179

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            RI   +S  R  TS + + VYP  D+  +++I E D RID YR+SG GGQ VNTTDSAV
Sbjct: 180 QRIPVTESQGRIQTSAAGVLVYPEPDEVEDVQIDEKDLRIDVYRSSGKGGQGVNTTDSAV 239

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTGVVV CQ+ERSQ +NKA+A  +L A+L ++E +K E  A  G +++   +   
Sbjct: 240 RITHLPTGVVVTCQKERSQIQNKARAMQVLAARLQQMEEEKAEAEAAEGRAAQIRTMDRS 299

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R   +  +   VL GDL+    A     +
Sbjct: 300 ERIRTYNF-PESRVSDHRIGYKANNLDAVLGGDLESLFAALKDADR 344


>gi|256825643|ref|YP_003149603.1| peptide chain release factor 1 [Kytococcus sedentarius DSM 20547]
 gi|256689036|gb|ACV06838.1| bacterial peptide chain release factor 1 (bRF-1) [Kytococcus
           sedentarius DSM 20547]
          Length = 357

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 113/345 (32%), Positives = 165/345 (47%), Gaps = 11/345 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
              A+   + L  +   P +  +    +   R    L+         +    D     EL
Sbjct: 5   LGEALAEHARLEAEMARPEVVGDPARFRAAARGYAALEPVARAAARREAAEQDLAAAREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A EE D +              E   +          D  D  LEV AG GG ES  +A+
Sbjct: 65  AAEEPDFAAELPALVEELEAAQEALTRALVP--RDPDDDRDVILEVKAGEGGQESALFAH 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVH 188
            L+RMY R AE+R +    LE    +  G+K A + I        G   +  LK E GVH
Sbjct: 123 ELVRMYLRHAERRGWAATVLESTASDLGGVKDARVAIRARGAGEPGDAPWARLKFEGGVH 182

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS   + V P VDD  E+EI+ +D ++D YR+SG GGQ VNTTDS
Sbjct: 183 RVQRVPVTESQGRIHTSAVGVLVLPEVDDPGEVEIAPADLKVDVYRSSGPGGQSVNTTDS 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307
           AVR+TH+PTGVVV CQ E+SQ +NK  A  +L ++L  + L++ +   +    ++   + 
Sbjct: 243 AVRLTHLPTGVVVTCQNEKSQLQNKEAALRVLASRLRRMALEEAQAEVSQARRAQVRTVD 302

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
              ++R+Y   P   V D RT  +  +   VLDGDLD  + + +A
Sbjct: 303 RSERVRTYNF-PESRVSDHRTGYKAHNLPAVLDGDLDAVIDSLVA 346


>gi|257058120|ref|YP_003136008.1| peptide chain release factor 1 [Cyanothece sp. PCC 8802]
 gi|256588286|gb|ACU99172.1| peptide chain release factor 1 [Cyanothece sp. PCC 8802]
          Length = 370

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 177/348 (50%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q    L  +  DP +  N  E + + R R  L+  +      +    + +   ++
Sbjct: 10  LQSVDQTYQELTHRLADPDIATNPDELQRVARLRSSLEETVLTYDSWKQTQEELIGAKQI 69

Query: 76  ALEEDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +      ++E       +  ++++   +  +   L     D  +  LE+ AG GG E+
Sbjct: 70  LKDAGGDPEMREMAALEVEELAEKLEELEKKLKILLLPRDPNDDKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY+R+AE +K+  + +     +  G K A L I+G   Y  LK E GVHR+
Sbjct: 130 SIWAGDLVRMYSRYAESQKWTVKLVSESLADMGGFKEAILEIQGDRVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P   D +E++I   D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPVTEAGGRVHTSTATVAIMP-EVDDVEVQIDAKDIEITTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + + P G+ + C +ERSQ +N+ +A  +LRAKLYEL+L  RE+   +    K+++G G 
Sbjct: 249 DLFYKPLGIRIFCTEERSQLQNRERAMQILRAKLYELKL--REQQDAVSSMRKSQVGTGA 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R   +  S +  L+GD+++ +++ ++  +
Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLG-QNFSLAGTLEGDIEEIIQSCISQDQ 352


>gi|317008750|gb|ADU79330.1| peptide chain release factor 1 [Helicobacter pylori India7]
          Length = 352

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 178/345 (51%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L +     EL
Sbjct: 8   LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISVASKEYLSVLENIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    +  +     D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P   D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++      +  K ++G G    +
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + + R N+   S  +++  G+LD+ +   +A  +
Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348


>gi|218245097|ref|YP_002370468.1| peptide chain release factor 1 [Cyanothece sp. PCC 8801]
 gi|226739099|sp|B7K205|RF1_CYAP8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|218165575|gb|ACK64312.1| peptide chain release factor 1 [Cyanothece sp. PCC 8801]
          Length = 370

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 97/348 (27%), Positives = 177/348 (50%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q    L  +  DP +  N  E + + R R  L+  +      +    + +   ++
Sbjct: 10  LQSVDQTYQELTHRLADPDIATNPDELQRVARLRSSLEETVLTYDSWKQTQEELIGAKQI 69

Query: 76  ALEEDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +      ++E       +  ++++   +  +   L     D  +  LE+ AG GG E+
Sbjct: 70  LKDAGGDPEMREMAALEVEELAEKLEELEKKLKILLLPRDPNDDKNIMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY+R+AE +K+  + +     +  G K A L I+G   Y  LK E GVHR+
Sbjct: 130 SIWAGDLVRMYSRYAESQKWTVKLVSESLADMGGFKEAILEIQGDRVYSKLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P   D +E++I   D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPVTEAGGRVHTSTATVAIMP-EVDDVEVQIDAKDIEITTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + + P G+ + C +ERSQ +N+ +A  +LRAKLY+L+L  RE+   +    K+++G G 
Sbjct: 249 DLFYKPLGIRIFCTEERSQLQNRERAMQILRAKLYDLKL--REQQDAVSSMRKSQVGTGA 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R   +  S +  L+GD+++ +++ ++  +
Sbjct: 307 RSEKIRTYNYKD-NRVTDHRLG-QNFSLAGTLEGDIEEIIQSCISQDQ 352


>gi|121608524|ref|YP_996331.1| peptide chain release factor 1 [Verminephrobacter eiseniae EF01-2]
 gi|166223615|sp|A1WI56|RF1_VEREI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|121553164|gb|ABM57313.1| bacterial peptide chain release factor 1 (bRF-1) [Verminephrobacter
           eiseniae EF01-2]
          Length = 359

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 115/335 (34%), Positives = 174/335 (51%), Gaps = 9/335 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           QRL  L+     P +  ++++ + + RE   +            R  D     EL L + 
Sbjct: 14  QRLGELDFLLARPDIMADMVQYRSIAREHAEVTQVAGRYARYLQREADLGAAREL-LADP 72

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTESQDWANMLL 138
             + L +   +  + +L     + + LL  +      +A++E+ AG GG ES  +A  L 
Sbjct: 73  GMAELAQEEIDSSQTELRQLEDELQRLLLPKEPDDARNAFVEIRAGTGGDESALFAGDLT 132

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTR+A +R ++ + L  +  E  G K   L I G   YG LK E G HR+ R+   ++
Sbjct: 133 RMYTRYAARRGWQVQVLSENPAELGGYKEIVLRIDGEQVYGTLKFESGGHRVQRVPATET 192

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS  ++ V P  D +  I ++ ++ RIDT+RASGAGGQH+N TDSAVR+ H+PTG
Sbjct: 193 QGRVHTSACTVAVMPEPDPARAIALNPAELRIDTFRASGAGGQHINKTDSAVRVVHLPTG 252

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSY 315
           +V +CQ  RSQH NKA+A  +L+A+L E E  +R   A      K  IG G    +IR+Y
Sbjct: 253 IVAECQDGRSQHGNKARALQVLQARLQEKERSER--AAKEAALRKGLIGSGERSDRIRTY 310

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              P   + D R  +       +LDG+LD  ++A 
Sbjct: 311 NF-PQGRLTDHRIQLTLYQLQQLLDGELDPMLQAL 344


>gi|209883257|ref|YP_002287114.1| peptide chain release factor 1 [Oligotropha carboxidovorans OM5]
 gi|229470351|sp|B6JA06|RF1_OLICO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|209871453|gb|ACI91249.1| peptide chain release factor 1 [Oligotropha carboxidovorans OM5]
          Length = 358

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 107/349 (30%), Positives = 174/349 (49%), Gaps = 16/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72
            D  + R + L  +        N        RE   L   +  +K  +     L D   +
Sbjct: 7   LDILLARHAALEAELLGQ---LNAEAYVRATRELAELTPVVDAVKAYRAGASELSDLDAM 63

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTES 130
           ++    + +   + E+   + + + E   +Q    L  +      +  LEV AG GG E+
Sbjct: 64  IDDPTTDAEMRAMAESERPVLQERQENLEQQIRIALLPKDAMDERNVVLEVRAGTGGDEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A  + +K E +   +G   G K     ++G  A+  LK E GVHR+
Sbjct: 124 SLFAGDLFRMYERFAALQGWKVEVISASEGTVGGYKEIVAQVQGRGAFAKLKFESGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +++ R HTS +++ V P   + I+I+I ++D RI+T RA GAGGQHVN T+SA+
Sbjct: 184 QRVPDTEASGRIHTSAATVAVLP-EAEEIDIDIKDTDLRIETMRAQGAGGQHVNKTESAI 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG+VV  Q  RSQHKN+A A N+LR+++ + E Q+    +      + ++G G 
Sbjct: 243 RITHIPTGIVVMMQDSRSQHKNRASAMNILRSRILDAERQR--AASERSADRRGQVGSGD 300

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
              ++R+Y   P   V D R N+       V+ G+ L++ + A     +
Sbjct: 301 RSERVRTYNF-PQGRVTDHRINLTLYKLPQVIAGEALNELIDALTTEHQ 348


>gi|256372571|ref|YP_003110395.1| peptide chain release factor 1 [Acidimicrobium ferrooxidans DSM
           10331]
 gi|256009155|gb|ACU54722.1| peptide chain release factor 1 [Acidimicrobium ferrooxidans DSM
           10331]
          Length = 357

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 112/346 (32%), Positives = 175/346 (50%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLIL 72
           ++      + +  +  DP ++Q+   A+ + R  + L+  +  ++ +Q    D      L
Sbjct: 6   YERFEHEYARVLEELADPAIFQDQRRAREVARRHKELEAIVGALRRVQALEGDRDAAREL 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
              A   +   +  E  +    +    E  +   L S   D     LE+    GG E+  
Sbjct: 66  YRGASPAEREELKAELDEIDAALARAREALELLLLPSDPNDGRAVILEIRGAEGGEEANL 125

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L  MY RWA++R +K E L     +  G    TLL++G +A+  LK E G HR+ R
Sbjct: 126 FAKDLADMYERWADRRSWKVEVLSRSVSDLGGYDDVTLLVRGDDAWKRLKHEAGPHRVQR 185

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++   P   D IE+ I  SD RID YR++G GGQ VNTTDSAVRI
Sbjct: 186 VPVTETQGRVHTSSATVTALP-EADEIEVSIDPSDLRIDVYRSTGPGGQSVNTTDSAVRI 244

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWG 309
           TH+PTG+VV  Q E+SQ +N+A+A  +LRA+L +LE  KR+    +  + K +I   G  
Sbjct: 245 THLPTGIVVAMQDEKSQIQNRAKALQVLRARLLKLEQDKRQAE--LTATRKAQIRSGGRS 302

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y  +    V D R  +       +L GDLD+   A L  ++
Sbjct: 303 EKIRTYNFK-ENRVTDHRIGLTLYRLDQILQGDLDELSDALLVHER 347


>gi|225552361|ref|ZP_03773301.1| peptide chain release factor 1 [Borrelia sp. SV1]
 gi|225371359|gb|EEH00789.1| peptide chain release factor 1 [Borrelia sp. SV1]
          Length = 357

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 123/347 (35%), Positives = 191/347 (55%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++A  ++  +  K +D +L ++  +   +++E  +L+   +   E +  L        +
Sbjct: 6   LNSATSKIKLIEEKLQDINLIKDQKKYSKIVKEYTYLEKINTKKIEYEKILSQINDTKTI 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +ED   + +     L  +  + E  +       L   E DS +  +E+ AG GG E+ 
Sbjct: 66  LEKEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGTGGEEAA 125

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +AN L  MY +++EK+K+KTE +  ++ E  G K     IKG + +  LK E GVHR+ 
Sbjct: 126 LFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRVQ 185

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +SN R  TS +++ V P ++++    I+E D RID YR+SGAGGQHVNTTDSAVR
Sbjct: 186 RIPITESNGRLQTSAATVAVLPNIEETEID-INEKDLRIDVYRSSGAGGQHVNTTDSAVR 244

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E      + K ++G G  
Sbjct: 245 ITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQE--QRSSNRKQQVGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y   P   + D R NI      + + G+LD  +   +   +
Sbjct: 303 SERIRTYNF-PQNRITDHRANITLYKLEEFIQGELDPLLDPLMIALQ 348


>gi|193216649|ref|YP_001999891.1| peptide chain release factor 1 [Mycoplasma arthritidis 158L3-1]
 gi|226739117|sp|B3PMD5|RF1_MYCA5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|193001972|gb|ACF07187.1| peptide chain release factor 1 [Mycoplasma arthritidis 158L3-1]
          Length = 355

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 99/342 (28%), Positives = 173/342 (50%), Gaps = 6/342 (1%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLILLE 74
           +  ++   L  +     ++ ++ +   + +E   +++           +     +  +L+
Sbjct: 7   SIKEKYELLAQELTKLEIFNDIKKYTKIQKEHASIEDIAIAFINYLAAESSYNLSKEILQ 66

Query: 75  LALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
              +E+  ++ +E  D     ++   +  +   L   E D+ +  +E+   AGG E   +
Sbjct: 67  NEKDEELIALAKEDIDEQSTLMQKLEQELKELLLPQDENDNKNVIMEIRGAAGGDEGDIF 126

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           +  L +MY ++ E   FK + ++   G   G      ++KG   +  LK E+GVHR+ R+
Sbjct: 127 SGDLFKMYQKFCEANDFKIKIVDSVYGTAGGYSRIVFIVKGEKVFSKLKFERGVHRVQRV 186

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ V P VDD ++IEI   D  +D +R+SGAGGQ VNTTDSAVRIT
Sbjct: 187 PQTETQGRVHTSTATVTVLPEVDDDVKIEIRPEDIEVDVFRSSGAGGQSVNTTDSAVRIT 246

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
           H  TG++V  Q ERSQ  N+  A  +L+AKLYE+E++KREE                +IR
Sbjct: 247 HKKTGIIVTSQDERSQIMNRETALKILKAKLYEIEVKKREEEEQGLRKLAGTGDRSEKIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   + D R     +   +V++G+LD  + A +A +K
Sbjct: 307 TYNY-PQDRITDHRIGFSLS-LKNVMEGNLDKIIDALIADEK 346


>gi|297821206|ref|XP_002878486.1| hypothetical protein ARALYDRAFT_907869 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297324324|gb|EFH54745.1| hypothetical protein ARALYDRAFT_907869 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 417

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 105/355 (29%), Positives = 193/355 (54%), Gaps = 16/355 (4%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DR 65
            +  +   ++  +    L+ K  DP +  N  E + L +    LD  ++  +  +    +
Sbjct: 57  LIRKM---ESVEKTWKELSVKLADPAVVSNQSEYQKLAQSMSELDEVVTVFRRFKDCEKQ 113

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD--SNDAYLEVHA 123
           L ++ +L + A +++D + +  +  N   I++E   KQ + LL       + +  LEV A
Sbjct: 114 LLESKVLAKEAGDDEDMAEMIGSEINSLSIEIEGLEKQLKVLLLPSDPLDARNILLEVRA 173

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G GG E+  W   L+RMY R++E+  +K   +   + E  G K+  + IKG   Y  LK 
Sbjct: 174 GTGGDEAAIWTGDLVRMYQRYSERSSWKFSMVSCSEAEHGGYKTCVMEIKGNRVYSKLKY 233

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHR+ R+   ++  R HTS +++ + P   D +E+ I   D  + + R+ GAGGQ+V
Sbjct: 234 ESGVHRVQRVPQTETQGRVHTSTATVAIMP-EADEVEVVIDPKDIELTSARSGGAGGQNV 292

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N  ++A+ + H P+G+ + C +ER+Q +NKA+A+ +LRAKLYE+++++++E   I    K
Sbjct: 293 NKVETAIDLFHKPSGIRIFCTEERTQIRNKARAFQLLRAKLYEIKVREQQE--KIRNERK 350

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +++G G    +IR+Y  +    V D R  +   + +  LDG L+D ++A  A+++
Sbjct: 351 SQVGTGARSEKIRTYNYKD-SRVTDHRLKM-NFALTSFLDGALEDAVQACAALEQ 403


>gi|229819782|ref|YP_002881308.1| peptide chain release factor 1 [Beutenbergia cavernae DSM 12333]
 gi|229565695|gb|ACQ79546.1| peptide chain release factor 1 [Beutenbergia cavernae DSM 12333]
          Length = 373

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 112/346 (32%), Positives = 166/346 (47%), Gaps = 11/346 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +  +     +     DP +  +   A+ L R    L   +   +  +    D     ELA
Sbjct: 18  EPMLAEHREIEAALADPAVHADAGRARALGRRYAELGRVVGAYRAWRRAADDATAAAELA 77

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           +E+D  +         +    E   +    +     D  D  LE+ AG GG ES  +A  
Sbjct: 78  VEDDAFASEVPALQVAEADAAEHLRRVL--VPRDPDDGRDVILEIKAGEGGEESALFAGD 135

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHR 189
           LLRMY R+AE+R ++T+ LE  + +  G K   + +            +  LK E GVHR
Sbjct: 136 LLRMYLRFAERRGWQTQVLEATESDLGGYKDVQVAVKSRGAAAPEDGVWAALKYEGGVHR 195

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS + + V P VDD  E+EI   D RID +R+SG GGQ VNTTDSA
Sbjct: 196 VQRVPVTESQGRIHTSAAGVLVLPEVDDPGEVEIEGGDLRIDVFRSSGPGGQSVNTTDSA 255

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308
           VRITH+PTG+VV  Q E+SQ +N+ QA  +LRA+L   + +     A     S+   +  
Sbjct: 256 VRITHLPTGIVVSMQNEKSQLQNREQAMRVLRARLLAAQQEAAAAEAAEARRSQVRTVDR 315

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +IR+Y   P   + D RT  +  +   VL GDLD  + + +   
Sbjct: 316 SERIRTYNF-PENRIADHRTGYKAYNLDAVLAGDLDAVVASAVEAD 360


>gi|187251505|ref|YP_001875987.1| peptide chain release factor 1 [Elusimicrobium minutum Pei191]
 gi|186971665|gb|ACC98650.1| Peptide chain release factor [Elusimicrobium minutum Pei191]
          Length = 358

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 105/348 (30%), Positives = 184/348 (52%), Gaps = 13/348 (3%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D    ++    L  +    ++     E +   +    L   +    E++          
Sbjct: 7   MDISKYLEEFKTLEAEMSSGNMPS--EELQKKSKRHAFLRPIVEKGLELEAAQKGIKDAQ 64

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTE 129
           E+  +  D  + Q  ++ ++ +  ++   + E           DS   YLE+  GAGG E
Sbjct: 65  EIIKDGSDKEMSQMAAEEMETLNAQIPVLEAELRVLVIPPDPNDSKSIYLELRPGAGGDE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           S  +A  +LR+Y R+A+ + +KTE LE       G K A++ IKG  AY WL+ E G HR
Sbjct: 125 SSIFAAEMLRVYQRFADAKGWKTELLEYTPTGLKGCKYASMFIKGDGAYSWLRDESGTHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +++ R HTS  ++ + P   + ++I+I+ +D  ++T RA GAGGQ+VN  ++A
Sbjct: 185 VQRVPDTETSGRVHTSTITVAIMP-EAEEVDIQINPADIEMETCRAGGAGGQNVNKVETA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR+ H PTGVVV C++ERSQ  N+ +A NMLRAKLY++E +KR +   I ++ K+++G G
Sbjct: 244 VRLIHKPTGVVVSCREERSQGANRIKAMNMLRAKLYQMEEEKRNKE--IYDTRKSQVGTG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
               +IR+Y   P   V D RT     + +++++G +++ +     ++
Sbjct: 302 DRSEKIRTYNF-PQSRVTDHRTEKSYHNITEIMEGQIEEILNDLRTLR 348


>gi|88608013|ref|YP_506293.1| peptide chain release factor 1 [Neorickettsia sennetsu str.
           Miyayama]
 gi|119361566|sp|Q2GE03|RF1_NEOSM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|88600182|gb|ABD45650.1| peptide chain release factor 1 [Neorickettsia sennetsu str.
           Miyayama]
          Length = 367

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 117/355 (32%), Positives = 186/355 (52%), Gaps = 16/355 (4%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           ++ L G+   +  + R ++L  +   P    +      L +E   L   +  I   +   
Sbjct: 1   MDNLWGV--LEEILNRHTYLADRLRCPEAIASQE-FSKLSKEYAELKPKVELIARYKKLK 57

Query: 67  CDNLILLELALEE-DDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEV 121
            +   L  L     +D  I +    +LQ I+  +   + E         + D+ +  LEV
Sbjct: 58  EEQAYLELLVKNPLEDQEIREIGKSDLQAIQDVIPKLELEIKRMLLPKDKDDALNVMLEV 117

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG GG E+  +A  L  MY ++AE+ K++ E + I   E  G K A   I G + +  L
Sbjct: 118 RAGTGGDEAALFAASLFHMYQKYAERMKWRFEIISISHNEIGGYKEANASISGSDVFAKL 177

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   +S  R HTS +++ V P   + ++++I++ D RID YR+SG GGQ
Sbjct: 178 KFESGVHRVQRVPETESAGRIHTSTATVAVLP-EPEDVDVKINDKDLRIDVYRSSGPGGQ 236

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTTDSAVRITHIPTG+VV  Q E+SQHKN+A+A  +LR +LYE+E  K ++   I   
Sbjct: 237 SVNTTDSAVRITHIPTGIVVIQQDEKSQHKNRAKAMKVLRVRLYEIERNKVQQE--ISSM 294

Query: 302 SKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSD-VLDGDLDDFMKATLA 352
            K++IG G +    R+Y   P   + D R N+     ++ V +G+L+  ++A + 
Sbjct: 295 RKSQIGSGERSEKTRTYNF-PQGRITDHRINLTTYRINETVKEGELEPIIEALIR 348


>gi|238060791|ref|ZP_04605500.1| peptide chain release factor 1 [Micromonospora sp. ATCC 39149]
 gi|237882602|gb|EEP71430.1| peptide chain release factor 1 [Micromonospora sp. ATCC 39149]
          Length = 362

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 109/341 (31%), Positives = 167/341 (48%), Gaps = 16/341 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               +   + L  +  DP +  +   A+ + R    L        E++    D     EL
Sbjct: 6   LAALLDEYAELEKRLADPAIHADQNAARRVGRRYAELSPLHKAAAELEQARADLAAAREL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E+   +   E+         E   +    +     D+ D  +E+ AG GG ES  +A 
Sbjct: 66  AAEDPSFAAETESIAAGLPALEERLAELL--IPRDPHDAKDVIVEIKAGEGGEESALFAG 123

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-------PNAYGWLKGEQGVH 188
            LLRMYTR+AE+R + TE ++  D +  G+K  +L IK           +  LK E GVH
Sbjct: 124 DLLRMYTRYAERRGWLTEVIDAQDSDLGGVKDVSLAIKTKGVPEGGNGVWSRLKWEGGVH 183

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V P   + +++ +  +D RID +R+SG GGQ VNTTDS
Sbjct: 184 RVQRVPVTESQGRIHTSAAGVLVLP-EAEDVDVSVDPNDLRIDVFRSSGPGGQSVNTTDS 242

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE--- 305
           AVRITH+PTG+VV CQ E+SQ +N+ QA  +LRA+L  L   + +  A   ++ K +   
Sbjct: 243 AVRITHVPTGIVVSCQNEKSQLQNREQAMRILRARL--LAAAQEQADAAASDARKAQVRT 300

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           +    +IR+Y   P   + D R      +    L G+LD  
Sbjct: 301 VDRSERIRTYNF-PQNRITDHRIGYTAYNLDLALAGELDGV 340


>gi|320449740|ref|YP_004201836.1| peptide chain release factor 2, programmed [Thermus scotoductus
           SA-01]
 gi|320149909|gb|ADW21287.1| peptide chain release factor 2, programmed [Thermus scotoductus
           SA-01]
          Length = 307

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 138/299 (46%), Positives = 185/299 (61%), Gaps = 5/299 (1%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +   + ++  L   L L +    E+  ++       L     ++E    E+LLS      
Sbjct: 1   MDTFRSLESDLEGLLELWQEFPAEEREALRP----ELLEAAKKLESLYHETLLSFPHAEK 56

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +A L +  GAGGTE+ DWA MLLRMYTR+AE++ F+ E +++  G EAGI  A ++++G 
Sbjct: 57  NAILTIQPGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDVTPGAEAGIDYAQIIVRGE 116

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NAYG L  E GVHRLVR SP+D++ RRHTSF+ + V P VDD++E+ I   D RID +R+
Sbjct: 117 NAYGLLAPEAGVHRLVRPSPFDASGRRHTSFAGVEVMPEVDDTVEVVIRPEDLRIDVFRS 176

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
            G GGQ VNTTDSAVRI H+PTG+ V CQ  RSQ KNK  A  +LR++LYELE +K++E 
Sbjct: 177 QGHGGQGVNTTDSAVRIVHLPTGITVTCQTTRSQIKNKELAMKVLRSRLYELEWKKKQEE 236

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                     I WG QIRSYVL     VKD RT + +  P +VLDGDL DF+ A L  K
Sbjct: 237 LRKLRGEVRPIEWGSQIRSYVLDKQ-YVKDHRTGLMRFDPQNVLDGDLLDFIWAGLEWK 294


>gi|295105808|emb|CBL03351.1| bacterial peptide chain release factor 1 (bRF-1) [Gordonibacter
           pamelaeae 7-10-1-b]
          Length = 357

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 118/346 (34%), Positives = 174/346 (50%), Gaps = 12/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +Q    L  +  DP +  +  E   L +E           +E      D     E+
Sbjct: 10  LEKIIQAYEDLQGRMGDPAVLADQKEYNRLAKEYASQGPLAKKAREYVQASDDLAAAKEM 69

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D     QE    ++       E  +F  + +  AD  D  +E+ A AGG E+  +A
Sbjct: 70  MADPDMREFAQEEIAGIEAKLPALEEDIKFMLIPADPADDKDIIVEIRAAAGGDEAAIFA 129

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L +MY R+A  + +KTE +++   E  G K     +KG + Y  +K E GVHR+ R+ 
Sbjct: 130 GDLYKMYERFAGAQGWKTETMDVSASEAGGFKEIQFKVKGDHVYSVMKFESGVHRVQRVP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   D +E++I+E+D RID YRA G GGQ VNTTDSAVRITH
Sbjct: 190 KTESQGRIHTSTATVAVLP-EADEVEVDINENDLRIDVYRAGGPGGQCVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +P+G+VVQ Q ++SQ +NK  A  +LRA+LYE  L +++  A  G     +IG G    +
Sbjct: 249 LPSGLVVQSQDQKSQLQNKIAAMAVLRARLYEKMLAEQQ--AAEGAERLAQIGSGDRSEK 306

Query: 312 IRSYVLQPYQMVKDLRTNIE-KTSPSDVLDGD-LDDFMKATLAIKK 355
           IR+Y   P   V D R       +   VL GD L D + A  A  +
Sbjct: 307 IRTYN-GPQDRVTDHRIGYNGTYN--GVLLGDGLGDVITALQAADR 349


>gi|238650227|ref|YP_002916078.1| peptide chain release factor 1 [Rickettsia peacockii str. Rustic]
 gi|259585243|sp|C4K0C9|RF1_RICPU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238624325|gb|ACR47031.1| peptide chain release factor 1 [Rickettsia peacockii str. Rustic]
          Length = 355

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 122/347 (35%), Positives = 184/347 (53%), Gaps = 16/347 (4%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           +    + +   L        +  +  E     +E   L++ ++ IKE      +      
Sbjct: 6   NLAKILDKYENLGNTLSS-GIMGD--EFVKASKEYAELEDVVAKIKEYNKAKSELEEANN 62

Query: 75  LALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             LE    +   E  ++                +   L   +ADS  A +EV AG+GG E
Sbjct: 63  FKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGGEE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A +L  MY R+AE + ++ E L I D    G K A+  IKG + +  LK E GVHR
Sbjct: 123 AALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P   + ++I+I + D RIDTYRASGAGGQHVNTTDSA
Sbjct: 183 VQRVPETESQGRIHTSAATVAVLP-EAEEVDIKIEDKDLRIDTYRASGAGGQHVNTTDSA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG+ V  Q E+SQHKNKA+A  +LRA++YE E +  ++     +S + ++G G
Sbjct: 242 VRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERR--KKEQERADSRRGQVGSG 299

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
               +IR+Y   P   V D R N+      +V+ +G LD+F++A +A
Sbjct: 300 DRSERIRTYNF-PQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIA 345


>gi|78185551|ref|YP_377985.1| peptide chain release factor 1 [Synechococcus sp. CC9902]
 gi|119361629|sp|Q3AW64|RF1_SYNS9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|78169845|gb|ABB26942.1| bacterial peptide chain release factor 1 (bRF-1) [Synechococcus sp.
           CC9902]
          Length = 365

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 98/348 (28%), Positives = 165/348 (47%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---SFIKEIQDRLCDNLIL 72
              A      L  +  DP +  +    + + RER  L+  +     +++++    D   L
Sbjct: 10  LQTATASFRSLERQLADPDVANDPKRLETIARERSRLEPLVLDFEALQKLEQEQADAREL 69

Query: 73  LELALEEDDCSILQETS--DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
           L  +  +     L +    +   +    ++      L     D     LE+ AGAGG E+
Sbjct: 70  LRESRSDAAMQELAQDELSELEAQHTALLQRLTLALLPRDPRDDRSVMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+ +K  +  + L   + +  G +   + +KG + +  LK E GVHR+
Sbjct: 130 CIWAGDLARMYERYGQKLGWSVQQLSCTEADLGGYRELIVSVKGTSVFSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D++E+E+   D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADAVEVELDPKDLEISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C Q+RSQ +N+ +A  +LRAKL  LE +            ++++G G 
Sbjct: 249 DLLHKPTGIRVFCTQQRSQLQNRERALEILRAKL--LERELAAAAERESSHRRSQVGSGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R     +    VL G L+D + A +A ++
Sbjct: 307 RSEKIRTYNYKD-NRTTDHRLGRNFS-LEPVLQGQLEDLIGACIAEEQ 352


>gi|317179883|dbj|BAJ57669.1| peptide chain release factor 1 [Helicobacter pylori F32]
          Length = 352

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 103/345 (29%), Positives = 175/345 (50%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L +     EL
Sbjct: 8   LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLENIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K       +   +     D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEVVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P   D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++      +  K ++G G    +
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + + R N+   S  +++  G+LD+ +   +A  +
Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348


>gi|25453244|sp|P59102|RF2_BUCAP RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 364

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 158/352 (44%), Positives = 239/352 (67%), Gaps = 1/352 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL ++   L    D+     R+  ++ +     +W+       L +E+  L+  I+ I  
Sbjct: 12  KLIQRKKDLKRYLDYVAKSTRILEIDLELSSTEIWKKKEYVHNLNKEKNLLNIIINKINN 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  + + +I L+LA+E  D +I+QE S+ +++I  +++  +F  + S + D  + Y++V
Sbjct: 72  IEKNIKEMIIFLDLAIETKDNAIIQEISEEIKKIAEKIQELEFYRMFSNQHDHCNCYIDV 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG+GG ++QDW+ +LLRMY +W++K+ FKTE +E   GE  GIKS+T+ + G  A+GWL
Sbjct: 132 QAGSGGVDAQDWSKILLRMYLKWSDKKGFKTEIIEESTGEIVGIKSSTIKVSGQYAFGWL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           + E G+HRL+R SP+DS  RRHTSFSSI++YP ++D I IEI+ SD RID YRASGAGGQ
Sbjct: 192 RTETGIHRLIRKSPFDSGKRRHTSFSSIFIYPDIEDKINIEINPSDLRIDVYRASGAGGQ 251

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVN T+SAVRITH+PT +V QCQ  RSQHKNK QA   +++KLYE+++++++E     E 
Sbjct: 252 HVNRTESAVRITHLPTNIVTQCQNNRSQHKNKEQAIKQMKSKLYEMKIKEKKEKQKKIEK 311

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +K++I WG QIRSY+L     +KDLRT +EK +   VLDGDLDDF++ +L +
Sbjct: 312 NKSDISWGNQIRSYILD-NSKIKDLRTGVEKYNVQSVLDGDLDDFIEQSLIM 362


>gi|207091639|ref|ZP_03239426.1| peptide chain release factor 1 [Helicobacter pylori HPKX_438_AG0C1]
          Length = 352

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 178/345 (51%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L +     EL
Sbjct: 8   LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLENIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    +  +     D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P   D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++      +  K ++G G    +
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + + R N+   S  +++  G+LD+ +   +A  +
Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348


>gi|109948016|ref|YP_665244.1| peptide chain release factor 1 [Helicobacter acinonychis str.
           Sheeba]
 gi|122973223|sp|Q17VT1|RF1_HELAH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|109715237|emb|CAK00245.1| peptide chain release factor RF-1 [Helicobacter acinonychis str.
           Sheeba]
          Length = 352

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 175/345 (50%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L +     EL
Sbjct: 8   LSSILKRYDELTALLSSAEVINDIKKLTELSKEQSSIEEISVASKEYLSVLENIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K       +   +     D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIKKSELETTIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P   D +EI I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEISINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++      +  K ++G G    +
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + + R N+   S  +++  G+LD+ +   +A  +
Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348


>gi|209965909|ref|YP_002298824.1| peptide chain release factor 1 PrfA [Rhodospirillum centenum SW]
 gi|209959375|gb|ACJ00012.1| peptide chain release factor 1 PrfA [Rhodospirillum centenum SW]
          Length = 360

 Score =  196 bits (498), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 119/340 (35%), Positives = 177/340 (52%), Gaps = 13/340 (3%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
           R   L  +     L           +E   L+   + I E++    D   L  +A  +D 
Sbjct: 18  RYDELRDQLASGTLSG--EVFVRSSQEYAELEPVATAIAELRRARADMADLQAMAEGDDA 75

Query: 82  CSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
                   + ++  +             L   EAD  +A LEV AG GG E+  +A  L 
Sbjct: 76  EMATLARDELVEADRRIPELERRIMLALLPKDEADEKNAILEVRAGTGGDEAALFAAELF 135

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
            MY R+A  + ++ E +E+++    G K A+  I G N +  LK E GVHR+ R+   ++
Sbjct: 136 EMYRRYAGIQGWRFETIEVNETGLGGYKEASASITGRNVFRRLKFESGVHRVQRVPETEA 195

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS +++ V P   + ++I I E D RID +R+ G+GGQ VNTTDSAVRITH+PT 
Sbjct: 196 GGRIHTSAATVAVLP-EAEEVDIHIEEKDLRIDVFRSQGSGGQSVNTTDSAVRITHLPTN 254

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315
           +VVQCQ E+SQHKNKA+A  +LRA+LYE+E Q+R+       S +T++G G    +IR+Y
Sbjct: 255 IVVQCQDEKSQHKNKAKALKVLRARLYEIERQRRDSER--AASRRTQVGSGDRSERIRTY 312

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354
              P   V D R N+       V+ G+ LD+ + A +A  
Sbjct: 313 NF-PQGRVTDHRINLTLYKIDKVMAGEALDELVDALVASD 351


>gi|124024025|ref|YP_001018332.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964311|gb|ABM79067.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT
           9303]
          Length = 367

 Score =  196 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 101/348 (29%), Positives = 165/348 (47%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + A      L  +  DP +  +    + + RER  L+  +   + +Q    +     +L
Sbjct: 12  LETAKTSFQSLERQLADPDVAADPKLLESIARERARLEPLVLDFEALQHVEQEWQETKQL 71

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ-----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E      ++  +    +     +           L S   D     LE+ AGAGG E+
Sbjct: 72  LRESRGDEAMESLAQEELQQLEARKTVLVRRLTLALLPSDPRDQRSVMLEIRAGAGGNEA 131

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+ ++  +  + L   + +  G +   L IKG   +  LK E GVHR+
Sbjct: 132 CLWAGDLARMYERYGQRIGWSVQPLSATEADLGGFRELILSIKGDAVFSQLKFEAGVHRV 191

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D++E++I  S+  I T R+ GAGGQ+VN  ++AV
Sbjct: 192 QRVPTTESQGRVHTSTATVAVMP-EADAVEVQIDPSELEISTARSGGAGGQNVNKVETAV 250

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C Q+RSQ +N+ +A  +LRAKL  LE Q  E  A    + + ++G G 
Sbjct: 251 DLLHKPTGIRVFCTQQRSQLQNRERAMEILRAKL--LERQIAEANARESSTRRAQVGTGD 308

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R     +    VL G L++ + A +A ++
Sbjct: 309 RSEKIRTYNYKD-NRTTDHRLGRNFS-LEPVLTGQLEELIGACIAEEQ 354


>gi|114797902|ref|YP_759355.1| peptide chain release factor 1 [Hyphomonas neptunium ATCC 15444]
 gi|119361550|sp|Q0C4I8|RF1_HYPNA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|114738076|gb|ABI76201.1| peptide chain release factor 1 [Hyphomonas neptunium ATCC 15444]
          Length = 352

 Score =  196 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 110/347 (31%), Positives = 173/347 (49%), Gaps = 15/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72
               + R   +  +        N  E   L +E   L   +   + +   +  L +   +
Sbjct: 3   LQQVIDRYEEVEARMGA---TSNTNEIIALSKEHAELRPVVEKARALMTVRKGLSEAEAM 59

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +     E       E  D  +R+    +  Q   L     D  D  LEV AG GG E+  
Sbjct: 60  IASGDREMAELAEMEIDDLRERLPGLEQEMQLLLLPKDVDDKADIVLEVRAGTGGDEAAL 119

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMYTR+A+   +  E +++  G+  G K     + G   +G +K E GVHR+ R
Sbjct: 120 FAGDLFRMYTRFAQIMGWSVEIVDVAPGDAGGYKEIIANVSGDGVFGRMKWESGVHRVQR 179

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P   ++IEIE+   D RIDT R+SGAGGQHVNTTDSAVRI
Sbjct: 180 VPATETQGRIHTSAATVAVLP-APENIEIEVRADDIRIDTMRSSGAGGQHVNTTDSAVRI 238

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311
           TH+PTG++V    E+SQH N+ +A + L+ +LY  E ++ E+ A   E+  ++IG G + 
Sbjct: 239 THLPTGIMVTSS-EKSQHVNREKAMDQLKIRLY--ERERAEKDAARSEARASQIGSGDRS 295

Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
             +R+Y   P   + D R  +   S   ++ GD L D ++A +   +
Sbjct: 296 QKVRTYNY-PENRLTDHRIGLTLYSLDRIITGDKLGDVIEALITEDQ 341


>gi|317968845|ref|ZP_07970235.1| peptide chain release factor 1 [Synechococcus sp. CB0205]
          Length = 367

 Score =  196 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 107/361 (29%), Positives = 165/361 (45%), Gaps = 22/361 (6%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  +L      F           L  +  DP +  N  + + + RER  L+  +    ++
Sbjct: 6   LRERLETARTTF---------ETLERQLADPDVAANPAQLEPIARERARLEPLVLGYDQL 56

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDA 117
                      +L  E      ++  +         +I    E      L     D    
Sbjct: 57  CQWRKQEQEARQLLKESRGDQEMEALAQEELSGLATQIAAMEEQLTLALLPRDPRDERSV 116

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            LE+ AGAGG E+  WA  L RMY R+A+   +K + +   + E  G K   L I+G + 
Sbjct: 117 MLEIRAGAGGDEAAIWAGDLARMYERYAQSVGWKVQPVSASEAELGGYKELILAIQGDSV 176

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           +  LK E GVHR+ R+   +S  R HTS +++ V P   D +E++I  +D  I T R+ G
Sbjct: 177 FSQLKYEAGVHRVQRVPATESQGRVHTSTATVAVMP-EADPVEVQIDPTDLEISTARSGG 235

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           AGGQ+VN  ++AV + H PTG+ V C QERSQ +N+ +A  +LRAKLYE EL   E  A 
Sbjct: 236 AGGQNVNKVETAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAKLYERELA--EANAK 293

Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +   ++G G    +IR+Y  +      D R     +    VL G L + + A ++  
Sbjct: 294 ERSARLAQVGSGDRSEKIRTYNYKD-NRTTDHRLGRNFS-LEPVLQGQLAELIGACVSAD 351

Query: 355 K 355
           +
Sbjct: 352 Q 352


>gi|217034576|ref|ZP_03439984.1| hypothetical protein HP9810_903g1 [Helicobacter pylori 98-10]
 gi|216942931|gb|EEC22416.1| hypothetical protein HP9810_903g1 [Helicobacter pylori 98-10]
          Length = 352

 Score =  196 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 178/345 (51%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L +     EL
Sbjct: 8   LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISVASKEYLSILENIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    +  +     D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P   D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++      +  K ++G G    +
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + + R N+   S  +++  G+LD+ +   +A  +
Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348


>gi|256842350|ref|ZP_05547853.1| peptide chain release factor RF-2 [Parabacteroides sp. D13]
 gi|256735957|gb|EEU49288.1| peptide chain release factor RF-2 [Parabacteroides sp. D13]
          Length = 322

 Score =  196 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 123/315 (39%), Positives = 186/315 (59%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M++ + L   I    E+     +  +  E     ++    +E     ++    +E  +F 
Sbjct: 1   MKKVKELKKWIELYSEVHAAAEELELAYEYVK--EEIITEEEVDAAYKKALHLLEDLEFR 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  EAD     L++++GAGGTESQDWA+ML+RMY RWAE   +K       +G+EAGI
Sbjct: 59  NMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYQRWAENNGYKISIANYQEGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T  I+G  AYG+LK E GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+++  
Sbjct: 119 KTVTFNIEGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVKVEA 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAW 277
           +    DT+R+ GAGGQ+VN  +S VR+ +            ++++  + R Q KN+  A 
Sbjct: 179 AAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAM 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
             LR+ LY+ ELQ R       E+ K +I WG QIRSYV    + VKD RTN + +  + 
Sbjct: 239 RQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNG 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DG +DDF+KA L 
Sbjct: 298 VMDGKIDDFIKAYLM 312


>gi|159904190|ref|YP_001551534.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9211]
 gi|238687119|sp|A9BCL8|RF1_PROM4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|159889366|gb|ABX09580.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT
           9211]
          Length = 365

 Score =  196 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 101/349 (28%), Positives = 170/349 (48%), Gaps = 15/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR------LCDN 69
            + A      L  +  DP +  +    + + RER  L+  +   +++ +       + D 
Sbjct: 10  LETARSSFQNLELQLADPDVASDPKRLETIARERARLEPLVLDYEKLLEIEEELLEVKDV 69

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           L   +   + ++ +  +     L +  L  +      L     D     LE+ AGAGG E
Sbjct: 70  LRESKSDKDLEELAQDEMRKLELFKTNLINQLT-LALLPKDPRDERSVMLEIRAGAGGDE 128

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  WA  L RMY R+ +K  +    +   D +  G +   + +KG + +  LK E GVHR
Sbjct: 129 ACIWAGDLARMYERYGQKIGWSVRPISSTDADLGGFRELIISVKGDSVFSQLKFEAGVHR 188

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P   D +E+++   D  I T R+ GAGGQ+VN  ++A
Sbjct: 189 VQRVPATESQGRVHTSTATVAVMP-EADPVEVQLDPGDLEISTARSGGAGGQNVNKVETA 247

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           V + H PTG+ V C QERSQ +N+ +A  +LRAKL  LE++  E  A    +   ++G G
Sbjct: 248 VDLLHKPTGIRVFCTQERSQLQNRERAMEILRAKL--LEMEIAEANAKERSARLAQVGTG 305

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y  +      D R  I      +VL+G+LD+ + A +A ++
Sbjct: 306 DRSEKIRTYNYKD-NRTTDHRLGINFP-LENVLEGELDNLIGACIAEEQ 352


>gi|317176897|dbj|BAJ54686.1| peptide chain release factor 1 [Helicobacter pylori F16]
          Length = 352

 Score =  196 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 178/345 (51%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L +     EL
Sbjct: 8   LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSFIEEISITSKEYLSVLENIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    +  +     D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P   D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++      +  K ++G G    +
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + + R N+   S  +++  G+LD+ +   +A  +
Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348


>gi|159899315|ref|YP_001545562.1| peptide chain release factor 1 [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159892354|gb|ABX05434.1| peptide chain release factor 1 [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 365

 Score =  196 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 108/345 (31%), Positives = 163/345 (47%), Gaps = 14/345 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   LN +   P    + +    L RE+  L   +   +E             L
Sbjct: 9   LARVEARYIELNDEMTQPDALSDHVRLTTLAREQTELGELVGRYREFMQAEKSVEEAKAL 68

Query: 76  ALEEDDCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EE+D  + +     +     R++      +   L     D  +  +E+  G GG E+ 
Sbjct: 69  LREENDPELREMAQLEIDELSARMEAIGAEVRVLLLPRDPNDEKNVIIEIRQGEGGDEAA 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   + RMY R+AE R +KTE + + +    G K     ++G  A+  LK E GVHR+ 
Sbjct: 129 LFGADVYRMYQRYAEIRGWKTEVMSLSENGIGGFKEVIFEVQGQGAWSRLKYEGGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS  ++ V P   +   +EI + D RID YR+ G GGQ VNTTDSAVR
Sbjct: 189 RVPATEARGRIHTSTITVAVLP-EVEETAVEIKQEDYRIDVYRSGGHGGQGVNTTDSAVR 247

Query: 252 ITHI---PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           I +    P  +VV CQ  RSQ KN+  A N+LRA+LY  E +KR++   +GES   ++G 
Sbjct: 248 IVYKAGTPEEIVVVCQDTRSQIKNRESALNVLRARLYAREQEKRQKE--LGESRLAQVGS 305

Query: 309 GRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           G +   +R+Y   P   + D R     ++   VLDG LD  + A 
Sbjct: 306 GERAEKMRTYNY-PQDRITDHRIGQNISNLPVVLDGALDRLIDAL 349


>gi|315586075|gb|ADU40456.1| peptide chain release factor RF1 [Helicobacter pylori 35A]
          Length = 352

 Score =  196 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 105/345 (30%), Positives = 178/345 (51%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L +     EL
Sbjct: 8   LSSILKRYDELTALLSSAEVVSDIKKLTELSKEQSSIEEISIASKEYLSVLENIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    +  +     D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKLLETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P   D +EI I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEISINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++      +  K ++G G    +
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + + R N+   S  +++  G+LD+ +   +A  +
Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348


>gi|33864028|ref|NP_895588.1| peptide chain release factor 1 [Prochlorococcus marinus str. MIT
           9313]
 gi|81576937|sp|Q7V518|RF1_PROMM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|33635612|emb|CAE21936.1| peptide chain release factor RF-1 [Prochlorococcus marinus str. MIT
           9313]
          Length = 365

 Score =  196 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 101/348 (29%), Positives = 165/348 (47%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + A      L  +  DP +  +    + + RER  L+  +   + +Q    +     +L
Sbjct: 10  LETAKTSFQSLERQLADPDVAADPKLLESIARERARLEPLVLDFEALQHVEQEWQETKQL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ-----FESLLSGEADSNDAYLEVHAGAGGTES 130
             E      ++  +    +     +           L S   D     LE+ AGAGG E+
Sbjct: 70  LRESRGDDAMESLAQEELQQLEARKTVLVRRLTLALLPSDPRDQRSVMLEIRAGAGGNEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+ ++  +  + L   + +  G +   L IKG   +  LK E GVHR+
Sbjct: 130 CLWAGDLARMYERYGQRIGWSVQPLSATEADLGGFRELILSIKGDAVFSQLKFEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D++E++I  S+  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADAVEVQIDPSELEISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C Q+RSQ +N+ +A  +LRAKL  LE Q  E  A    + + ++G G 
Sbjct: 249 DLLHKPTGIRVFCTQQRSQLQNRERAMEILRAKL--LERQIAEANARESSTRRAQVGTGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R     +    VL G L++ + A +A ++
Sbjct: 307 RSEKIRTYNYKD-NRTTDHRLGRNFS-LEPVLTGQLEELIGACIAEEQ 352


>gi|168830308|gb|ACA34405.1| PrfA [uncultured bacterium pTW2]
          Length = 360

 Score =  196 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 109/329 (33%), Positives = 163/329 (49%), Gaps = 8/329 (2%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           DP    +    + L RE   L+     +        D      +  + +   + +E    
Sbjct: 25  DPGTIADAERFRALSREFAQLEPVAVALAAENRAQRDLAAAQAMRSDPELGGLAEEEIAA 84

Query: 92  LQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
                +        + +     D  + YLEV AG GG E+  +A  L RMY R+AE++ +
Sbjct: 85  ANARLQELESELMAQLVRRDPRDDGNLYLEVRAGTGGDEAAIFAGDLFRMYARYAERQGW 144

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K E      GE  G K     ++G  AY  LK E G HR+ R+   +S  R HTS +++ 
Sbjct: 145 KLEVESASVGEHGGYKEIVARVEGRGAYSKLKFESGTHRVQRVPDTESQGRIHTSAATVA 204

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           +       + IEI+ +D RIDT+R+SGAGGQHVN TDSA+RITH+P+GVVV+ Q ERSQH
Sbjct: 205 IIAEDSSDVAIEINPADLRIDTFRSSGAGGQHVNKTDSAIRITHLPSGVVVENQTERSQH 264

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLR 327
            N+ +A   LRA L E E  +RE  A   +  K ++G G    +IR+Y   P   + D R
Sbjct: 265 ANRDKAMKRLRAMLVEAETSRRE--AAQAQDRKLQVGSGDRSQRIRTYNY-PQGRITDHR 321

Query: 328 T-NIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +      +VL+G+LD  ++     ++
Sbjct: 322 VEGLTLYDLPNVLEGNLDALIERLAREQQ 350


>gi|150009345|ref|YP_001304088.1| peptide chain release factor RF-2 [Parabacteroides distasonis ATCC
           8503]
 gi|262384740|ref|ZP_06077873.1| peptide chain release factor RF-2 [Bacteroides sp. 2_1_33B]
 gi|149937769|gb|ABR44466.1| peptide chain release factor RF-2 [Parabacteroides distasonis ATCC
           8503]
 gi|262293721|gb|EEY81656.1| peptide chain release factor RF-2 [Bacteroides sp. 2_1_33B]
          Length = 322

 Score =  196 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 123/315 (39%), Positives = 186/315 (59%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M++ + L   I    E+     +  +  E     ++    +E     ++    +E  +F 
Sbjct: 1   MKKVKELKKWIELYGEVHAAAEELELAYEYVK--EEIITEEEVDAAYKKALHLLEDLEFR 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  EAD     L++++GAGGTESQDWA+ML+RMY RWAE   +K       +G+EAGI
Sbjct: 59  NMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYQRWAENNGYKISIANYQEGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T  I+G  AYG+LK E GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+++  
Sbjct: 119 KTVTFNIEGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVKVET 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAW 277
           +    DT+R+ GAGGQ+VN  +S VR+ +            ++++  + R Q KN+  A 
Sbjct: 179 AAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAM 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
             LR+ LY+ ELQ R       E+ K +I WG QIRSYV    + VKD RTN + +  + 
Sbjct: 239 RQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNG 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DG +DDF+KA L 
Sbjct: 298 VMDGKIDDFIKAYLM 312


>gi|261838950|gb|ACX98715.1| peptide chain release factor RF-1 [Helicobacter pylori 52]
          Length = 352

 Score =  196 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 103/345 (29%), Positives = 178/345 (51%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L +     EL
Sbjct: 8   LSSILKRYDELTALLSSAEVVSDIKKLTELSKEQSSIEEISITSKEYLSVLENIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    +  +     D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P   D +E+ ++ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSLNPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++      +  K ++G G    +
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + + R N+   S  +++  G+LD+ +   +A  +
Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348


>gi|113475767|ref|YP_721828.1| peptide chain release factor 2 [Trichodesmium erythraeum IMS101]
 gi|110166815|gb|ABG51355.1| bacterial peptide chain release factor 2 (bRF-2) [Trichodesmium
           erythraeum IMS101]
          Length = 288

 Score =  195 bits (496), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 130/255 (50%), Positives = 182/255 (71%)

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
           +  + + LLSG  D N A + ++AGAGGT++QDWA MLLRMYTRW E+ K+K +  EI +
Sbjct: 25  DQWELQQLLSGLYDQNGAVVTINAGAGGTDAQDWAEMLLRMYTRWGEEHKYKVQLAEISE 84

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
           G+EAG+KSATL I G  AYG+LK E+G HRLVRISP+++N +R TSF+ + V P++D S+
Sbjct: 85  GDEAGLKSATLEIIGRYAYGYLKAEKGTHRLVRISPFNANGKRQTSFAGVEVMPILDHSV 144

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           E++I E D  I T R+ G GGQ+VN  ++AVR+ HIPTG+ V+C QERSQ +NK +A  +
Sbjct: 145 ELDIPEKDLEITTSRSGGKGGQNVNKVETAVRVVHIPTGLSVRCTQERSQLQNKDKALAL 204

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           L+A+L  +  ++R +  N       E  WG QIR+YV  PYQMVKDLRT  E T+ +DV+
Sbjct: 205 LKARLLIIAQEQRAQEINEIRGDMVEAAWGNQIRNYVFHPYQMVKDLRTQKETTAINDVM 264

Query: 340 DGDLDDFMKATLAIK 354
           +G+LD F++A L  +
Sbjct: 265 NGELDQFIEAYLRQE 279


>gi|203284116|ref|YP_002221856.1| peptide chain release factor A [Borrelia duttonii Ly]
 gi|201083559|gb|ACH93150.1| peptide chain release factor A [Borrelia duttonii Ly]
          Length = 359

 Score =  195 bits (496), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 125/342 (36%), Positives = 188/342 (54%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +    ++  L  K +D +L +N  E   +++E  +L+       E Q  L       ++
Sbjct: 8   LNPIESKIKILEEKLQDVNLIKNQKEYSKIIKEYNYLEKIKEKKDEYQHILNQINENQKI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EED+  +       +  +  + +  +       L   E D  +  +E+ AG GG E+ 
Sbjct: 68  LSEEDNLEMKDLIKQEIAHLYSKKDEIENTIKILLLHQDENDDKNIIIEIRAGTGGEEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A+ L  MYT+++EK+K+KTE +  ++ E  G K  +  IKG + +  LK E GVHR+ 
Sbjct: 128 LFAHNLYEMYTKYSEKKKWKTELINFNETELGGFKEVSFEIKGKDVFKKLKHESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +SN +  TS +++ V P V+D+    I++ D RID YR+SGAGGQHVNTTDSAVR
Sbjct: 188 RIPITESNGKLQTSAATVAVLPEVEDTDIE-INDKDLRIDVYRSSGAGGQHVNTTDSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+V QCQ ERSQHKNK QA  +LRA+LYELE  K++E        K ++G G  
Sbjct: 247 ITHLPTGIVAQCQNERSQHKNKEQAMKILRARLYELENLKKQE--QRSNDRKQQVGSGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   V D R NI      +++ G+LD  +   
Sbjct: 305 SERIRTYNF-PQNRVTDHRANISLYKLEEIMQGELDSLLNTL 345


>gi|15644707|ref|NP_206877.1| peptide chain release factor 1 [Helicobacter pylori 26695]
 gi|2500136|sp|P55998|RF1_HELPY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|2313158|gb|AAD07148.1| peptide chain release factor RF-1 (prfA) [Helicobacter pylori
           26695]
          Length = 352

 Score =  195 bits (496), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 178/345 (51%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L +     EL
Sbjct: 8   LSSILKRYDELTALLSSAEVVSDIKKLTELSKEQSSIEEISIASKEYLSVLENIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    +  +     D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P   D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++      +  K ++G G    +
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + + R N+   S  +++  G+LD+ +   +A  +
Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348


>gi|317179532|dbj|BAJ57320.1| peptide chain release factor 1 [Helicobacter pylori F30]
          Length = 352

 Score =  195 bits (496), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 104/343 (30%), Positives = 178/343 (51%), Gaps = 9/343 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           + ++R   L        +  ++ +   L +E+  ++      KE    L +     EL  
Sbjct: 10  SILKRYDELTALLSSTEVISDIKKLTELSKEQSSIEEISVASKEYLSVLENIKENKELLE 69

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           +++   + +E    L+  K ++E    +  +     D  + YLE+ AG GG E+  +   
Sbjct: 70  DKELSELAKEELKLLETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFVGD 129

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+   
Sbjct: 130 LFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSKLKFEAGTHRVQRVPET 189

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS  ++ + P   D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH+P
Sbjct: 190 ESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITHLP 248

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           T + V  Q E+SQHKNK +A  +L+A+LYE ++++++      +  K ++G G    +IR
Sbjct: 249 TNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           +Y   P   + + R N+   S  +++  G+LD+ +   +A  +
Sbjct: 307 TYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348


>gi|255016197|ref|ZP_05288323.1| peptide chain release factor RF-2 [Bacteroides sp. 2_1_7]
          Length = 322

 Score =  195 bits (496), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 123/315 (39%), Positives = 186/315 (59%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M++ + L   I    E+     +  +  E     ++    +E     ++    +E  +F 
Sbjct: 1   MKKVKELKKWIELYGEVHAAAEELELAYEYVK--EEIITEEEVDAAYKKALHLLEDLEFR 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  EAD     L++++GAGGTESQDWA+ML+RMY RWAE   +K       +G+EAGI
Sbjct: 59  NMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYQRWAENNGYKISIANYQEGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T  I+G  AYG+LK E GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+++  
Sbjct: 119 KTVTFNIEGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVKVEA 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAW 277
           +    DT+R+ GAGGQ+VN  +S VR+ +            ++++  + R Q KN+  A 
Sbjct: 179 AAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAM 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
             LR+ LY+ ELQ R       E+ K +I WG QIRSYV    + VKD RTN + +  + 
Sbjct: 239 RQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNG 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DG +DDF+KA L 
Sbjct: 298 VMDGKIDDFIKAYLM 312


>gi|108562503|ref|YP_626819.1| peptide chain release factor 1 [Helicobacter pylori HPAG1]
 gi|119361549|sp|Q1CV77|RF1_HELPH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|107836276|gb|ABF84145.1| peptide chain release factor RF-1 [Helicobacter pylori HPAG1]
          Length = 352

 Score =  195 bits (496), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 103/345 (29%), Positives = 178/345 (51%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L +     EL
Sbjct: 8   LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLENIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    +  +     D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGNEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K++ E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWRVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P   D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++      +  K ++G G    +
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + + R N+   S  +++  G+LD+ +   +A  +
Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348


>gi|308062940|gb|ADO04827.1| peptide chain release factor 1 [Helicobacter pylori Sat464]
          Length = 352

 Score =  195 bits (496), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 179/345 (51%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R + L        +  ++ +   L +E+  ++      KE    L +     EL
Sbjct: 8   LSSILKRYNELTALLSSAEVVSDIKKLTELSKEQSSIEEISVASKEYLSVLENIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    +  +     D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P   D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++      +  K ++G G    +
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + + R N+   S  +++  G+LD+ +   +A  +
Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348


>gi|146337703|ref|YP_001202751.1| peptide chain release factor 1 [Bradyrhizobium sp. ORS278]
 gi|146190509|emb|CAL74508.1| peptide chain release factor 1 [Bradyrhizobium sp. ORS278]
          Length = 361

 Score =  195 bits (496), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 109/345 (31%), Positives = 170/345 (49%), Gaps = 18/345 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L  +        N      + RE   L+  I  +K  +  + +      L
Sbjct: 9   LDVLLAHHASLEAELLGQ---VNSDRYVQITRELAELNPLIDAVKAYRAGVKELADTEAL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL------LSGEADSNDAYLEVHAGAGGTE 129
             + D  + ++      +R +L     + E             D  +  LE+ AG GG E
Sbjct: 66  IADPDTDAEMR-AMAESERDELVARRGELEQKIRIALLPKDAMDDRNVVLEIRAGTGGDE 124

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  L RMY R+A  + +K E +   +G   G K     ++G  A+  LK E GVHR
Sbjct: 125 ASLFAGDLFRMYERFASLQGWKVEVISASEGTVGGYKEIIAEVQGRGAFAKLKFESGVHR 184

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R HTS +++ V P   + ++++I + D RI+T RA GAGGQHVN T+SA
Sbjct: 185 VQRVPDTETQGRIHTSAATVAVLP-EIEDVDVDIKQDDLRIETMRAQGAGGQHVNKTESA 243

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           +RITHIPTG+VV  Q  RSQHKN+A A N+LR+++Y+ E QK +  A      K ++G G
Sbjct: 244 IRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAERQKVD--AARSAERKEKVGSG 301

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
               +IR+Y   P   V D R N+       V+ G+ L + + A 
Sbjct: 302 DRSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGEALGELVDAL 345


>gi|317181378|dbj|BAJ59162.1| peptide chain release factor 1 [Helicobacter pylori F57]
 gi|332672916|gb|AEE69733.1| peptide chain release factor RF1 [Helicobacter pylori 83]
          Length = 352

 Score =  195 bits (496), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 104/343 (30%), Positives = 178/343 (51%), Gaps = 9/343 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           + ++R   L        +  ++ +   L +E+  ++      KE    L +     EL  
Sbjct: 10  SILKRYDELTALLSSAEVVSDIKKLTELSKEQSSIEEISVASKEYLSVLENIKENKELLE 69

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           +++   + +E    L+  K ++E    +  +     D  + YLE+ AG GG E+  +   
Sbjct: 70  DKELSELAKEELKLLETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFVGD 129

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+   
Sbjct: 130 LFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVPET 189

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS  ++ + P   D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH+P
Sbjct: 190 ESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITHLP 248

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           T + V  Q E+SQHKNK +A  +L+A+LYE ++++++      +  K ++G G    +IR
Sbjct: 249 TNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           +Y   P   + + R N+   S  +++  G+LD+ +   +A  +
Sbjct: 307 TYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348


>gi|188526883|ref|YP_001909570.1| peptide chain release factor 1 [Helicobacter pylori Shi470]
 gi|238691882|sp|B2URQ8|RF1_HELPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|188143123|gb|ACD47540.1| peptide chain release factor 1 [Helicobacter pylori Shi470]
          Length = 352

 Score =  195 bits (496), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 178/345 (51%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L +     EL
Sbjct: 8   LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISVASKEYLSVLENIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    +  +     D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P   D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINSSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++      +  K ++G G    +
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + + R N+   S  +++  G+LD+ +   +A  +
Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348


>gi|108804488|ref|YP_644425.1| peptide chain release factor 1 [Rubrobacter xylanophilus DSM 9941]
 gi|119361598|sp|Q1AVG5|RF1_RUBXD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|108765731|gb|ABG04613.1| bacterial peptide chain release factor 1 (bRF-1) [Rubrobacter
           xylanophilus DSM 9941]
          Length = 364

 Score =  195 bits (496), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 112/342 (32%), Positives = 168/342 (49%), Gaps = 11/342 (3%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
            R   L  +  DP ++ +      + RE   +       +   + L +     EL    +
Sbjct: 14  ARYRELTEELSDPAIFNDQRRYAEVAREHSRMRRGAELSERFLEALREEREARELIPAAE 73

Query: 81  DCSILQETSDNLQ----RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
                +  +   +    R     E  + E +     D  D  LE+ AG GG E+  +A  
Sbjct: 74  SAEEREFFAGEAREAGRRAGELAEEIRSELIDRDPNDDKDVILEIRAGTGGDEAALFAGD 133

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L  MY R+A++  F+   L+    E  G K   + I+G  AY   K E G HR+ R+   
Sbjct: 134 LYEMYARYADRLGFRHRVLDASPAEVGGYKEIIVEIEGDGAYSVFKHEGGTHRVQRVPKT 193

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS +++ V P   + +E+EI+ +D  ID YR+SG GGQ VNTTDSAVRITH P
Sbjct: 194 ESQGRIHTSTATVAVLP-EAEEVEVEINPNDLEIDVYRSSGPGGQSVNTTDSAVRITHKP 252

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IR 313
           TG+VV CQ E+SQ +NK QA  +LR++L  LE + RE     G+    + G G +   IR
Sbjct: 253 TGLVVTCQNEKSQLQNKEQALRILRSRL--LEREMRERQEREGQMRLAQFGSGDRSAKIR 310

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   + D R  +   +   VL G+L++F KA  A ++
Sbjct: 311 TYNF-PQGRITDHRVGLTVHNLEAVLGGELEEFTKALAAKER 351


>gi|319948468|ref|ZP_08022604.1| peptide chain release factor 1 [Dietzia cinnamea P4]
 gi|319437888|gb|EFV92872.1| peptide chain release factor 1 [Dietzia cinnamea P4]
          Length = 361

 Score =  195 bits (496), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 114/346 (32%), Positives = 169/346 (48%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +     L  +  DP L ++   A+ + +    L   +   + +     D     EL
Sbjct: 12  IDDVLSEYGGLEAQLSDPTLHEDAAAARRVGKRFAELTPIVQCHRALVSTRDDAAAAREL 71

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A ++   +   +  D                      D++D  +E+ +G GG ES  +A 
Sbjct: 72  AGDDPSFAEEADRLDAEAAELEARLADLL--APRDPHDADDVVMEIKSGEGGEESALFAA 129

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-----YGWLKGEQGVHRL 190
            L RMYTR+AEK  +  E L + + +  G K A+  I+         +  LK E GVHR+
Sbjct: 130 DLARMYTRYAEKHGWIVEVLGVTESDLGGYKDASFSIRSRQPSRDGVWSRLKFEGGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + V+P  +D   +EI ESD RID YR+SG GGQ VNTTDSAV
Sbjct: 190 QRVPVTESQGRVHTSAAGVLVFPEPEDVGPVEIDESDLRIDVYRSSGKGGQGVNTTDSAV 249

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG VV CQ ERSQ +NK +A  +L A+L     +     A  G +S+   +   
Sbjct: 250 RITHLPTGTVVTCQNERSQLQNKQRALQVLAARLQAAAEEAAGAEAAEGRASQVRTVDRS 309

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R   +  +   VLDGDLD  + A  A ++
Sbjct: 310 ERIRTYNY-PENRIADHRVGFKAHNLDAVLDGDLDAVLDALAAEER 354


>gi|255559292|ref|XP_002520666.1| peptide chain release factor, putative [Ricinus communis]
 gi|223540051|gb|EEF41628.1| peptide chain release factor, putative [Ricinus communis]
          Length = 370

 Score =  195 bits (496), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 107/350 (30%), Positives = 173/350 (49%), Gaps = 17/350 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++A +    L+ K  DP +  N  E + L +    LD  +S  +  +D          L
Sbjct: 12  LESAEKTWKELSVKLADPDVVSNPTEYQKLAQSVAELDQVVSVYRRFKDCEKQLEETKAL 71

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY-----KQFESLLSGEADSNDAYLEVHAGAGGTES 130
           A EE     + E                    +   L S   D+ +  LEV AG GG E+
Sbjct: 72  AKEEGTDEDMAEMIALEIDSLSTELKGLEEKLKVLLLPSDPLDARNIMLEVRAGTGGDEA 131

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY ++ E+  +K   +   + E+ G K+  + +KG   Y  LK E GVHR+
Sbjct: 132 GLWAGDLVRMYEKYCEQNSWKYAIVSCSEAEKGGYKTYVMEVKGNRVYSKLKYESGVHRV 191

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P   D +E+ I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 192 QRVPQTETQGRVHTSTATVAIMP-EADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAV 250

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ER+Q +NK +A  +LRAKLY  E++ RE+  +I    K ++G G 
Sbjct: 251 DLFHKPTGIRIFCTEERTQLQNKTRALQLLRAKLY--EMKVREQQESIRNQRKLQVGTGA 308

Query: 310 --RQIRSYVLQPYQMVKDLR--TNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R   N E T     L GD+++ ++A  + ++
Sbjct: 309 RAEKIRTYNYKD-NRVTDHRLKMNFELT---SFLQGDIENAVQACASTEQ 354


>gi|222100137|ref|YP_002534705.1| Peptide chain release factor 2 [Thermotoga neapolitana DSM 4359]
 gi|221572527|gb|ACM23339.1| Peptide chain release factor 2 [Thermotoga neapolitana DSM 4359]
          Length = 218

 Score =  195 bits (496), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 120/210 (57%), Positives = 155/210 (73%)

Query: 142 TRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            RWAE++ F  E +E   GEEAGIK AT+LIKG  AYG+LK E GVHRLVRISP+D+  R
Sbjct: 1   MRWAERKGFDVEIVEYQPGEEAGIKDATILIKGEYAYGYLKHESGVHRLVRISPFDAARR 60

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           RHTSF+S+ V P ++D + IEI   D +I+T+RASG GGQHVN T+SAVRITHIPTG+VV
Sbjct: 61  RHTSFASVNVIPEIEDDVHIEIKPEDLKIETFRASGHGGQHVNKTESAVRITHIPTGIVV 120

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
            CQ ERSQH+NK  A  +L+A+LY+LEL+K+ +     +    +I WG QIRSYV  PY 
Sbjct: 121 TCQNERSQHQNKQTALKILKARLYQLELEKKRKEIQEIQGELKDISWGNQIRSYVFHPYT 180

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +VKD RT +E ++   V+DGD+D F++A L
Sbjct: 181 LVKDHRTGVETSNVDAVMDGDIDIFIEAEL 210


>gi|317010358|gb|ADU84105.1| peptide chain release factor 1 [Helicobacter pylori SouthAfrica7]
          Length = 352

 Score =  195 bits (496), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 179/345 (51%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++   +  KE    L +     EL
Sbjct: 8   LSSILKRYDELTALLSSAEVVNDIKKLTELSKEQSSIEEISTASKEYLSVLENIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K E+E    +  +     D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKALEIKKSELEATIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P   D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++      +  K ++G G    +
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           +R+Y   P   + + R N+   S  +++  G+LD+ +   +A  +
Sbjct: 305 VRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348


>gi|39933683|ref|NP_945959.1| peptide chain release factor 1 [Rhodopseudomonas palustris CGA009]
 gi|192289040|ref|YP_001989645.1| peptide chain release factor 1 [Rhodopseudomonas palustris TIE-1]
 gi|61214634|sp|Q6NC66|RF1_RHOPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229470355|sp|B3QCF6|RF1_RHOPT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|39647529|emb|CAE26050.1| peptide chain release factor 1 [Rhodopseudomonas palustris CGA009]
 gi|192282789|gb|ACE99169.1| peptide chain release factor 1 [Rhodopseudomonas palustris TIE-1]
          Length = 361

 Score =  195 bits (496), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 101/349 (28%), Positives = 170/349 (48%), Gaps = 16/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L  +       ++      + RE   L+  +  +K  +    +   + EL
Sbjct: 9   LDVLLAHHAALEAQLMAQVGAED---YVRITRELSELNPLVEAVKSYRQVRDELGEIDEL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130
             +      ++  ++  +        +  + +          D  +  LE+ AG GG E+
Sbjct: 66  LEDPATEPEMRAMAEAERDALDAHRDELIQQIRIALLPKDAMDERNVMLEIRAGTGGDEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY ++A  + +  E +   +G   G K     +KG  A+  LK E GVHR+
Sbjct: 126 SLFAGDLFRMYEKFAALQGWSVEVISASEGTVGGYKEIIAEVKGRGAFAKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++++I + D RI+T RA GAGGQHVN T+SA+
Sbjct: 186 QRVPDTETQGRIHTSAATVAVLP-EVEDVDVDIKQDDLRIETMRAQGAGGQHVNKTESAI 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VV  Q  RSQHKN+A A N+LR+++Y+ E Q+ +  A      K ++G G 
Sbjct: 245 RITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAEQQRLD--AARSAERKAKVGSGD 302

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V+ G+ L + + A     +
Sbjct: 303 RSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGEALGELIDALTTEHQ 350


>gi|116515052|ref|YP_802681.1| hypothetical protein BCc_111 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|122285552|sp|Q057W1|RF1_BUCCC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116256906|gb|ABJ90588.1| peptide chain release factor 1 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 357

 Score =  195 bits (495), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 110/344 (31%), Positives = 173/344 (50%), Gaps = 7/344 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  +R   L     + +   +  E   L +E+ +L +             +   +  L
Sbjct: 9   LKSLKKRYIQLEKLLSNNYSKFDKREFSKLSKEKANLYDLYKEFMSWLSIKSEIKDIQLL 68

Query: 76  ALEED-DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D      +E    L+R K   +  +   +     D N  ++E+ A  GG E+  ++
Sbjct: 69  LNDLDLSTLAQEELLIALKRKKEIEKKIKMLLIPIDPYDKNSCFIEIRAATGGHEAAIFS 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L +MY ++A+ + +K + + +H+GE+ G K   L + G  A G LK E G HR+ R+ 
Sbjct: 129 GDLCKMYMKYADFKSWKVDIINMHEGEKGGYKEIILKVIGIGACGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P V  S  I ++ SD +IDT+R+SGAGGQHVNTTDSAVRITH
Sbjct: 189 QTESQGRVHTSACTVAIMPEVPKSKRIILNTSDLKIDTFRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR---Q 311
           +PTG VV+CQ ERSQHKNK +A ++L AK+Y       E+        K+ +G G    +
Sbjct: 249 LPTGCVVECQDERSQHKNKEKALSVLSAKIYSKM--NAEKKLKNSLMRKSLLGTGERSDR 306

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            R+Y       V D R N+     ++VL G LD  ++  L   +
Sbjct: 307 NRTYNFS-QNRVTDHRINLTIYRLNEVLLGKLDLLIEPLLQEHQ 349


>gi|257791638|ref|YP_003182244.1| peptide chain release factor 1 [Eggerthella lenta DSM 2243]
 gi|257475535|gb|ACV55855.1| peptide chain release factor 1 [Eggerthella lenta DSM 2243]
          Length = 352

 Score =  195 bits (495), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 117/346 (33%), Positives = 173/346 (50%), Gaps = 12/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               ++    +  K  DP +  +  E   L +E  +        +E      D     E+
Sbjct: 5   LTKIIEAYEDVQAKMGDPAVLADQKEYNRLAKEYANQGPLAKKAREYVQAADDLAEAREM 64

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D      E    ++       E  +F  + +  AD  D  +E+ A AGG E+  +A
Sbjct: 65  LADPDMKEFALEEIAGIEAKLPALEEDIKFMLIPADPADDKDIIVEIRAAAGGDEAAIFA 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L +MY R+A  + +KTE +++   E  G K     +KG + Y  +K E GVHR+ R+ 
Sbjct: 125 GELYKMYERFASAQGWKTETMDMSASEAGGFKEIQFKVKGDHVYSVMKFESGVHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   D +E+EI+E+D RID YRA G GGQ VNTTDSAVRITH
Sbjct: 185 KTESQGRIHTSTATVAVLP-EADEVEVEINENDLRIDVYRAGGPGGQCVNTTDSAVRITH 243

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +P+G+VVQ Q ++SQ +NK  A  +LRA+LYE  L +++  A  G     +IG G    +
Sbjct: 244 LPSGLVVQSQDQKSQLQNKIAAMAVLRARLYEKMLAEQQ--AAEGAKRLAQIGSGDRSEK 301

Query: 312 IRSYVLQPYQMVKDLRTNIE-KTSPSDVLDGD-LDDFMKATLAIKK 355
           IR+Y   P   V D R       +   VL GD L D + A  A  +
Sbjct: 302 IRTYN-GPQDRVTDHRIGFNGTYN--GVLLGDGLGDVITALQAADR 344


>gi|145220477|ref|YP_001131186.1| peptide chain release factor 2 [Prosthecochloris vibrioformis DSM
           265]
 gi|145206641|gb|ABP37684.1| bacterial peptide chain release factor 2 (bRF-2) [Chlorobium
           phaeovibrioides DSM 265]
          Length = 300

 Score =  195 bits (495), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 139/297 (46%), Positives = 198/297 (66%), Gaps = 1/297 (0%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +   +++          L LA E  + S  +E   ++  I+ E++  +F ++LSG+ D  
Sbjct: 1   MEGYRKMASDATSCREELTLADELGEESYAEELDASIAAIEAEMDAIEFRNMLSGKDDEG 60

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           +A + +HAGAGGTE+QDWA ML RMY RWAE++ FK    +   G+ AGIK+ATL I+GP
Sbjct: 61  NAIITIHAGAGGTEAQDWAEMLYRMYMRWAERKGFKIYTDDYQAGDGAGIKTATLEIQGP 120

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYG+LK E GVHRLVR+SP+DSN+RRHTSF+S++ YP     +EIE+ + D  + T+R+
Sbjct: 121 YAYGYLKAENGVHRLVRVSPFDSNARRHTSFASVYTYPEAPPDVEIEVRKEDLELSTFRS 180

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
            G GGQ+VN  ++AVRI H+P+G+VV CQQERSQ +N+ +A  ML A+LY+ + ++ +  
Sbjct: 181 GGKGGQNVNKVETAVRIKHVPSGIVVGCQQERSQFQNRERAMKMLMAQLYQRQREEEDAK 240

Query: 296 ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               E  K +I WG QIRSYVL   + +KD RTN E+     VLDGD+DDFM A L+
Sbjct: 241 KREVEGKKKKIEWGSQIRSYVLDD-RRIKDHRTNHERFDIETVLDGDIDDFMHAYLS 296


>gi|51473710|ref|YP_067467.1| peptide chain release factor 1 [Rickettsia typhi str. Wilmington]
 gi|61214605|sp|Q68WK7|RF1_RICTY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|51460022|gb|AAU03985.1| peptide chain release factor 1 (RF-1) [Rickettsia typhi str.
           Wilmington]
          Length = 355

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 125/347 (36%), Positives = 186/347 (53%), Gaps = 16/347 (4%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           +    + +   L  K     +  +  E     +E   L++ +  IKE      +      
Sbjct: 6   NLVKILDKYENLGRKLSS-GIIGD--EFVKASKEYAELEDIVVKIKEYNKVKSELEEANN 62

Query: 75  LALEEDDCSILQETSDNLQRIKLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           L LE    +   E  +N   I            +   L   EADS  A +EV AG+GG E
Sbjct: 63  LRLEVALDNATLEMINNEIYILENLLPKLERAVRISLLPKDEADSKSAIIEVRAGSGGEE 122

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A +L  MY R+AE + ++ E L I +    G K A+  IKG + +  LK E GVHR
Sbjct: 123 AALFAAVLFNMYQRYAEFKGWRFEILAISNTGIGGYKEASASIKGKDVFSKLKFESGVHR 182

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P   + ++I+I + D RIDTYR+SGAGGQHVNTTDSA
Sbjct: 183 VQRVPETESQGRIHTSAATVAVLP-EAEGVDIKIEDKDLRIDTYRSSGAGGQHVNTTDSA 241

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRITHIPTG+ V  Q E+SQHKNKA+A  +LRA+LY  E ++R++     +S + ++G G
Sbjct: 242 VRITHIPTGITVALQDEKSQHKNKAKALKILRARLY--EEKRRQKEQERSDSRRWQVGSG 299

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD-GDLDDFMKATLA 352
               +IR+Y    +  V D R N+      +V+  G LD+F++A +A
Sbjct: 300 DRSERIRTYNFL-HGRVSDHRINLTLYKIDEVVKHGQLDEFIEALIA 345


>gi|318042535|ref|ZP_07974491.1| peptide chain release factor 1 [Synechococcus sp. CB0101]
          Length = 365

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 112/361 (31%), Positives = 169/361 (46%), Gaps = 22/361 (6%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           LS +L+     FD          L  +  DP +  N  + + + RER  L+  +    E+
Sbjct: 6   LSERLDAARTTFD---------TLERQLADPDVAANPAQLEPIARERARLEPLVMGYDEL 56

Query: 63  QD---RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF--ESLLSGEADSNDA 117
           Q    +      LL  +  + D   L +        ++    +Q     L     D    
Sbjct: 57  QTLQGQEQQARELLRESRGDLDLEALAQEELAELATRISALEEQLTLALLPRDPRDERSV 116

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            LE+ AGAGG E+  WA  L RMY R+A+   +K + +   + E  G K   L IKG   
Sbjct: 117 MLEIRAGAGGDEAALWAGDLARMYERYAQSVGWKVQPVSASEAELGGYKELILAIKGDGV 176

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           +  LK E GVHR+ R+   +S  R HTS +++ V P   D +E++I   D  I T R+ G
Sbjct: 177 FSQLKFEAGVHRVQRVPATESQGRVHTSTATVAVMP-EADPVEVQIDPGDLEISTARSGG 235

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           AGGQ+VN  ++AV + H PTG+ V C QERSQ +N+ +A  +LRAKLYE EL      A 
Sbjct: 236 AGGQNVNKVETAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAKLYERELA--TANAE 293

Query: 298 IGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +   ++G G    +IR+Y  +      D R     +    VL G L + + A ++  
Sbjct: 294 ERSARLAQVGTGDRSEKIRTYNYKD-NRTTDHRLGRNFS-LEPVLQGQLAELIGACVSAD 351

Query: 355 K 355
           +
Sbjct: 352 Q 352


>gi|261837535|gb|ACX97301.1| peptide chain release factor RF-1 [Helicobacter pylori 51]
          Length = 352

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 104/343 (30%), Positives = 178/343 (51%), Gaps = 9/343 (2%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           + ++R   L        +  ++ +   L +E+  ++      KE    L +     EL  
Sbjct: 10  SILKRYDELTALLSSTEVVSDIKKLTELSKEQSSIEEISVASKEYLSVLENIKENKELLE 69

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           +++   + +E    L+  K ++E    +  +     D  + YLE+ AG GG E+  +   
Sbjct: 70  DKELSELAKEELKLLETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFVGD 129

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+   
Sbjct: 130 LFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVPET 189

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS  ++ + P   D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH+P
Sbjct: 190 ESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITHLP 248

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           T + V  Q E+SQHKNK +A  +L+A+LYE ++++++      +  K ++G G    +IR
Sbjct: 249 TNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSERIR 306

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           +Y   P   + + R N+   S  +++  G+LD+ +   +A  +
Sbjct: 307 TYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348


>gi|308061372|gb|ADO03260.1| peptide chain release factor 1 [Helicobacter pylori Cuz20]
          Length = 352

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 178/345 (51%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L +     EL
Sbjct: 8   LSSILKRYDELTALLSSTEVVSDIKKLTELSKEQSSIEEISVASKEYLSVLENIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    +  +     D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P   D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++      +  K ++G G    +
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + + R N+   S  +++  G+LD+ +   +A  +
Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348


>gi|91974579|ref|YP_567238.1| peptide chain release factor 1 [Rhodopseudomonas palustris BisB5]
 gi|119361592|sp|Q13F02|RF1_RHOPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91681035|gb|ABE37337.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodopseudomonas
           palustris BisB5]
          Length = 361

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 107/349 (30%), Positives = 171/349 (48%), Gaps = 16/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72
            D  +   + L  +     +     E   + RE   L+  +      +E++D L D   L
Sbjct: 9   LDVLLAHHASLEAQLL-GEVGA--SEYVRITRELSELNPLVEAVKAYREVRDELGDVDAL 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTES 130
           LE    + +   + E   +          ++    L  +      +  LE+ AG GG E+
Sbjct: 66  LEDPDTDSEMRAMAEAERDALDAHRAELIQEIRVALLPKDAMDERNVMLEIRAGTGGDEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY ++A  + +  E +   +G   G K     +KG  A+  LK E GVHR+
Sbjct: 126 SLFAGDLFRMYEKFAALQGWSVEVISASEGSMGGFKEIIAEVKGRGAFAKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++++I   D +IDT RA GAGGQHVN T+SA+
Sbjct: 186 QRVPDTETQGRIHTSAATVAVLP-EVEEVDVDIKADDLKIDTMRAQGAGGQHVNKTESAI 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VV  Q  RSQHKN+A A N+LR+++Y+ E Q+ +  A      K ++G G 
Sbjct: 245 RITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAEQQRLD--AARSAERKEKVGSGD 302

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V+ G+ L + + A     +
Sbjct: 303 RSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGEALGELIDALTTEHQ 350


>gi|308182253|ref|YP_003926380.1| peptide chain release factor 1 [Helicobacter pylori PeCan4]
 gi|308064438|gb|ADO06330.1| peptide chain release factor 1 [Helicobacter pylori PeCan4]
          Length = 352

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 103/345 (29%), Positives = 174/345 (50%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L       EL
Sbjct: 8   LSSILKRYDELTALLSSAEVVSDIKKLTELSKEQSSIEEISIASKEYLSVLEGIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K       +   +     D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P   D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++      +  K ++G G    +
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + + R N+   S  +++  G+LD+ +   +A  +
Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348


>gi|255079106|ref|XP_002503133.1| predicted protein [Micromonas sp. RCC299]
 gi|226518399|gb|ACO64391.1| predicted protein [Micromonas sp. RCC299]
          Length = 366

 Score =  195 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 90/348 (25%), Positives = 167/348 (47%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +++ +    L  +  DP +  +  E + L +    L   +      ++   +     E+
Sbjct: 11  LESSERTHKELTFRLADPDVASDAKEFQKLSKALGELTGVVDMYARYKECQAEEADAREM 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  +            +  E +          D  +  LE+ AG GG E+
Sbjct: 71  VKDAAGDAEMEAMAREEIAALKGEMDELEEKMTIALLPKDPLDDKNIMLEIRAGTGGDEA 130

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+A+ + +    L  +  +  G K   + I G + Y  LK E GVHR+
Sbjct: 131 GIWAGDLWRMYQRYAQSKGWSATILSSNAADFGGYKEIVVEINGDSVYSELKWEAGVHRV 190

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R  TS +++ V P   D +E++I + D  I + R+ GAGGQ+VN  ++A+
Sbjct: 191 QRVPATESQGRVQTSTATVAVMP-EVDEVEVKIDDKDIEISSARSGGAGGQNVNKVETAI 249

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C +ER+Q KN+ +A+ +LRAKL+E++L+++++   I    K ++G G 
Sbjct: 250 DLLHKPTGIRVFCTEERTQLKNRIRAFQILRAKLFEIQLEEQQKE--IAGRRKAQVGSGA 307

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R   +     + + GD+   +    A+++
Sbjct: 308 RSEKIRTYNWKD-SRVSDHRLG-QNFPLDNFIGGDIGPAIGGCQAMEQ 353


>gi|317013501|gb|ADU80937.1| peptide chain release factor 1 [Helicobacter pylori Gambia94/24]
          Length = 352

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 102/345 (29%), Positives = 175/345 (50%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++     L +E+  ++      KE    L +     EL
Sbjct: 8   LSSILKRYDELTALLSSVEVVSDIKRLTELSKEQSSIEEISVASKEYLSVLENIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K       +   +     D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K   +LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P   D +E+ ++ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++      +  K ++G G    +
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + + R N+   S  +++  G+LD+ +   +A  +
Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348


>gi|298377870|ref|ZP_06987820.1| peptide chain release factor 2, programmed [Bacteroides sp. 3_1_19]
 gi|301312251|ref|ZP_07218168.1| peptide chain release factor 2, programmed [Bacteroides sp. 20_3]
 gi|298265316|gb|EFI06979.1| peptide chain release factor 2, programmed [Bacteroides sp. 3_1_19]
 gi|300829673|gb|EFK60326.1| peptide chain release factor 2, programmed [Bacteroides sp. 20_3]
          Length = 322

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 123/315 (39%), Positives = 187/315 (59%), Gaps = 11/315 (3%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           M++ + L   I    E+     +  +  E     ++    +E     ++    +E  +F 
Sbjct: 1   MKKVKELKKWIELYGEVHAAAEELELAYEYVK--EEIITEEEVDAAYKKALHLLEDLEFR 58

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           ++L  EAD     L++++GAGGTESQDWA+ML+RMY RWAE   +K       +G+EAGI
Sbjct: 59  NMLRDEADQMSCVLKINSGAGGTESQDWASMLMRMYQRWAENNGYKISIANYQEGDEAGI 118

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K+ T+ I+G  AYG+LK E GVHRLVR+SPY++  +R TSF+S++V P+VDD+IE+++  
Sbjct: 119 KTVTIDIEGDYAYGYLKSENGVHRLVRVSPYNAQGKRMTSFASVFVTPLVDDTIEVKVEA 178

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHI--------PTGVVVQCQQERSQHKNKAQAW 277
           +    DT+R+ GAGGQ+VN  +S VR+ +            ++++  + R Q KN+  A 
Sbjct: 179 AAISWDTFRSGGAGGQNVNKVESGVRLRYQFKDPYTGEEEEILIENTETRDQPKNRENAM 238

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
             LR+ LY+ ELQ R       E+ K +I WG QIRSYV    + VKD RTN + +  + 
Sbjct: 239 RQLRSILYDKELQHRMAEQAKVEAGKKKIEWGSQIRSYVFDD-RRVKDHRTNYQTSDVNG 297

Query: 338 VLDGDLDDFMKATLA 352
           V+DG +DDF+KA L 
Sbjct: 298 VMDGKIDDFIKAYLM 312


>gi|87309295|ref|ZP_01091431.1| peptide chain release factor 1 [Blastopirellula marina DSM 3645]
 gi|87287934|gb|EAQ79832.1| peptide chain release factor 1 [Blastopirellula marina DSM 3645]
          Length = 358

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 99/346 (28%), Positives = 162/346 (46%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  + R  FL  +  DP +  N  +   + RE   L    +  +  ++ + +     EL
Sbjct: 5   LEEKLSRFEFLEKQMSDPDVMGNSHQMATIAREHGSLAKLATKYRTFKNTIDEMGEAKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS---GEADSNDAYLEVHAGAGGTESQD 132
              +D+       +D +       +  Q    ++    +A+     LE+  GAGG E+  
Sbjct: 65  LESDDEEMCELAAADIVTLKAKREKLWQELLDMTIGGDDANRTRIVLEIRGGAGGDEAAL 124

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L  MY R+AE +K+K E +E +  E  G K   + ++G   Y  L+ E G HR+ R
Sbjct: 125 FARDLYEMYKRYAETKKWKYEVMEANPTELGGFKEVIISVEGEGVYRELQYESGGHRVQR 184

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V P  +D       E         +SG GGQHVN T SAVR+
Sbjct: 185 VPETEAKGRVHTSAATVAVMPEPEDVEFELNPEDYEVERYAASSGPGGQHVNKTASAVRL 244

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311
            H   GV+VQC +ERSQHKN A+A  +L+ KLY  E+++ EE     +  K+ +G G + 
Sbjct: 245 IHKD-GVIVQCCEERSQHKNLAKALRLLKTKLY--EVKRAEEEKQRSDHRKSLVGSGDRS 301

Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             IR+Y   P   V D R N+       ++ G +   +   +   +
Sbjct: 302 QRIRTYNF-PENRVTDHRINLTLYKLDQIIAGAIQPVIDGLVDYDR 346


>gi|47459025|ref|YP_015887.1| peptide chain release factor 1 [Mycoplasma mobile 163K]
 gi|61214626|sp|Q6KIA0|RF1_MYCMO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|47458353|gb|AAT27676.1| peptide chain release factor 1 [Mycoplasma mobile 163K]
          Length = 358

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 107/343 (31%), Positives = 173/343 (50%), Gaps = 5/343 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72
             +  ++      K   P ++ N+ E   + +E   +   +    +    +  + D  IL
Sbjct: 9   LKSIKEKYDSNEKKLLLPEVFNNIKEYTKISKENNSISEIVENFNKFLINEQTIKDAKIL 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L+   EE       E   +    +   +  +   L   E D  +  +E+   AGG E+  
Sbjct: 69  LDEKDEEMVSFAKNEIHKSELENQELEKKLRILILPKDENDERNVIIEIRGAAGGDEANI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LL+MY +WA+  K K + L+  +    G    T L++G  AY  LK E GVHR+ R
Sbjct: 129 FAGDLLKMYNKWADINKMKLKLLDYANASSGGFSQVTFLVEGDKAYSKLKFESGVHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           I   ++  R HTS +++ V P VDD  E+EI+  D +IDT+R+SG GGQ VNTTDSAVRI
Sbjct: 189 IPVTETQGRVHTSTTTVTVMPEVDDVAEVEINPVDLKIDTFRSSGPGGQSVNTTDSAVRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
           TH+P+G+VV  Q E+SQ  N+  A  +L++KLY+LE++KR E                +I
Sbjct: 249 THLPSGIVVSSQDEKSQISNRESALKILKSKLYDLEIKKRNEETGKFRKLAGSGARSEKI 308

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R+Y   P   + D R     +     ++G +++ ++A  A ++
Sbjct: 309 RTYNY-PQDRITDHRIGFSTS-LKIAMEGKINNIIEALHAEEQ 349


>gi|317487895|ref|ZP_07946487.1| peptide chain release factor 1 [Eggerthella sp. 1_3_56FAA]
 gi|325830623|ref|ZP_08164044.1| peptide chain release factor 1 [Eggerthella sp. HGA1]
 gi|316913021|gb|EFV34538.1| peptide chain release factor 1 [Eggerthella sp. 1_3_56FAA]
 gi|325487369|gb|EGC89811.1| peptide chain release factor 1 [Eggerthella sp. HGA1]
          Length = 357

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 117/346 (33%), Positives = 173/346 (50%), Gaps = 12/346 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               ++    +  K  DP +  +  E   L +E  +        +E      D     E+
Sbjct: 10  LTKIIEAYEDVQAKMGDPAVLADQKEYNRLAKEYANQGPLAKKAREYVQAADDLAEAREM 69

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D      E    ++       E  +F  + +  AD  D  +E+ A AGG E+  +A
Sbjct: 70  LADPDMKEFALEEIAGIEAKLPALEEDIKFMLIPADPADDKDIIVEIRAAAGGDEAAIFA 129

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L +MY R+A  + +KTE +++   E  G K     +KG + Y  +K E GVHR+ R+ 
Sbjct: 130 GELYKMYERFASAQGWKTETMDMSASEAGGFKEIQFKVKGDHVYSVMKFESGVHRVQRVP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   D +E+EI+E+D RID YRA G GGQ VNTTDSAVRITH
Sbjct: 190 KTESQGRIHTSTATVAVLP-EADEVEVEINENDLRIDVYRAGGPGGQCVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +P+G+VVQ Q ++SQ +NK  A  +LRA+LYE  L +++  A  G     +IG G    +
Sbjct: 249 LPSGLVVQSQDQKSQLQNKIAAMAVLRARLYEKMLAEQQ--AAEGAKRLAQIGSGDRSEK 306

Query: 312 IRSYVLQPYQMVKDLRTNIE-KTSPSDVLDGD-LDDFMKATLAIKK 355
           IR+Y   P   V D R       +   VL GD L D + A  A  +
Sbjct: 307 IRTYN-GPQDRVTDHRIGFNGTYN--GVLLGDGLGDVITALQAADR 349


>gi|307636767|gb|ADN79217.1| peptide chain release factor 1 [Helicobacter pylori 908]
 gi|325995353|gb|ADZ50758.1| Peptide chain release factor 1 [Helicobacter pylori 2018]
 gi|325996950|gb|ADZ49158.1| Peptide chain release factor 1 [Helicobacter pylori 2017]
          Length = 352

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 102/345 (29%), Positives = 174/345 (50%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++     L +E+  ++      KE    L       EL
Sbjct: 8   LSSILRRYDELTALLSSAEVVSDIKRLTELSKEQSSIEEISVASKEYLSVLEGIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K       +   +     D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K   +LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P   D +E+ ++ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++      +  K ++G G    +
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + + R N+   S  +++  G+LD+ +   +A  +
Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348


>gi|15828576|ref|NP_325936.1| peptide chain release factor 1 [Mycoplasma pulmonis UAB CTIP]
 gi|20139344|sp|Q98RA5|RF1_MYCPU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|14089518|emb|CAC13278.1| PEPTIDE CHAIN RELEASE FACTOR 1 (RF-1) [Mycoplasma pulmonis]
          Length = 359

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 165/344 (47%), Gaps = 6/344 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + + +   LN +   P +  ++   K   RE   + +      +  +          +
Sbjct: 9   LKSILDKYQELNQELLKPEVLSDIKLYKKFSRELNSIKSISEEFSKYLNYEKTIESSKII 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEV----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +E D  ++      +   + ++    E  +   L   + D  D  +E+   AGG E+ 
Sbjct: 69  LAQEKDEELISLAKKEILECEEKMSSLVEELKILLLPKDKNDELDVIMEIRGAAGGDEAN 128

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY++WA     K   L+ +     G       I G  AY  LK E GVHR+ 
Sbjct: 129 IFAGDLFEMYSKWANNNNMKVSVLDRNYATSGGFTLIVFTISGEKAYSKLKFESGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS +++   P +DD IE+EI+ SD +IDT+R+SGAGGQ VNTTDSAVR
Sbjct: 189 RIPVTESKGRVHTSTATVTAMPEIDDDIEVEINPSDLKIDTFRSSGAGGQSVNTTDSAVR 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           ITHIPTG++   Q+ RSQ  N+  A  +L+AKLY+ E QK+ E                +
Sbjct: 249 ITHIPTGIISSSQEGRSQISNRELALKILKAKLYDHENQKKLEKVGQYRKLAGSGARSEK 308

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N   +S   +++G L   + + LA ++
Sbjct: 309 IRTYNY-PQDRVTDHRINF-SSSLKQIMEGKLQIIIDSLLAEEQ 350


>gi|254796771|ref|YP_003081607.1| peptide chain release factor 1 [Neorickettsia risticii str.
           Illinois]
 gi|254590013|gb|ACT69375.1| peptide chain release factor 1 [Neorickettsia risticii str.
           Illinois]
          Length = 367

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 181/346 (52%), Gaps = 14/346 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  + R ++L  +   P    +      L +E   L   +  I   +    +   L  L
Sbjct: 8   LEEILNRHTYLADRLRCPETIPSQE-FSKLSKEYAELKPKVELITRYKKLKEEQAYLELL 66

Query: 76  ALEE-DDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTES 130
                +D  I +    +LQ I+  V   +FE         + D+ +  LEV AG GG E+
Sbjct: 67  VKNPLEDQEIREIGKSDLQAIQDVVPKLEFEIRRMLLPKDKDDALNVMLEVRAGTGGDEA 126

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L  MY ++AE+ K++ E + I   E  G K A   I G   +  LK E GVHR+
Sbjct: 127 ALFAASLFHMYQKYAERMKWRFEIISISHNEIGGYKEANASISGSEVFAKLKFESGVHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   + ++++I++ D RID YR+SG GGQ VNTTDSAV
Sbjct: 187 QRVPETESAGRIHTSTATVAVLP-EPEDVDVKINDKDLRIDVYRSSGPGGQSVNTTDSAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           R+THIPTG+VV  Q E+SQHKN+A+A  +L+ +LYE+E  K ++   I    K++IG G 
Sbjct: 246 RVTHIPTGIVVIQQDEKSQHKNRAKAMKVLKVRLYEIERNKVQQE--ISSMRKSQIGSGE 303

Query: 311 Q---IRSYVLQPYQMVKDLRTNIEKTSPSD-VLDGDLDDFMKATLA 352
           +    R+Y   P   + D R N+     ++ V +G+L+  ++A + 
Sbjct: 304 RSEKTRTYNF-PQGRITDHRINLTTYRINETVKEGELEPIIEALIR 348


>gi|203287654|ref|YP_002222669.1| peptide chain release factor A [Borrelia recurrentis A1]
 gi|201084874|gb|ACH94448.1| peptide chain release factor A [Borrelia recurrentis A1]
          Length = 359

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 124/342 (36%), Positives = 187/342 (54%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +++  L  K +D +L +N  E   +++E  +L+       E Q  L       ++
Sbjct: 8   LNPIEKKIKILEEKLQDVNLIKNQKEYSKIIKEYNYLEKIKEKKDEYQHILNQINENQKI 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EED+  +       +  +  + +  +       L   E D  +  +E+ AG GG E+ 
Sbjct: 68  LSEEDNLEMKDLIKQEIAHLYSKKDEIENTIKILLLHQDENDDKNIIIEIRAGTGGEEAA 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A+ L  MYT+++EK+K+KTE +  +  E  G K  +  IKG + +  LK E GVHR+ 
Sbjct: 128 LFAHNLYEMYTKYSEKKKWKTELINFNKTELGGFKEVSFEIKGKDVFKKLKHESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +SN +  TS +++ V P V+D+    I++ D R D YR+SGAGGQHVNTTDSAVR
Sbjct: 188 RIPITESNGKLQTSAATVAVLPEVEDTDIE-INDKDLRTDVYRSSGAGGQHVNTTDSAVR 246

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+V QCQ ERSQHKNK QA  +LRA+LYELE  K++E        K ++G G  
Sbjct: 247 ITHLPTGIVAQCQNERSQHKNKEQAMKILRARLYELENLKKQE--QRSNDRKQQVGSGDR 304

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
             +IR+Y   P   V D R NI      +++ G+LD  +   
Sbjct: 305 SERIRTYNF-PQNRVTDHRANISLYKLEEIMQGELDSLLNTL 345


>gi|15611143|ref|NP_222794.1| peptide chain release factor 1 [Helicobacter pylori J99]
 gi|7388059|sp|Q9ZMZ0|RF1_HELPJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|4154581|gb|AAD05656.1| PEPTIDE CHAIN RELEASE FACTOR 1 [Helicobacter pylori J99]
          Length = 352

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 103/345 (29%), Positives = 175/345 (50%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L       EL
Sbjct: 8   LSSILKRYDELTALLSSVEVVSDIKKLTELSKEQSSIEEISVASKEYLSVLEGIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K       +   +     D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K   +LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P   D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++      +  K ++G G    +
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + + R N+   S  +++  G+LD+ +   +A  +
Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQ 348


>gi|300868546|ref|ZP_07113164.1| peptide chain release factor 2 [Oscillatoria sp. PCC 6506]
 gi|300333459|emb|CBN58356.1| peptide chain release factor 2 [Oscillatoria sp. PCC 6506]
          Length = 291

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 126/255 (49%), Positives = 181/255 (70%)

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
           +  + + LLSG  D+  A L ++AGAGGT++QDWA MLLRMYTRW E++ +K    EI +
Sbjct: 28  DQWELQQLLSGPYDAGGAVLTINAGAGGTDAQDWAEMLLRMYTRWGERQGYKVHLAEISE 87

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
           G+EAG+KSATL I G  AYG+L+ E+G HRLVRISP+++N +R TSF+ + V P++D S+
Sbjct: 88  GDEAGLKSATLEIVGRYAYGYLRSEKGTHRLVRISPFNANDKRQTSFAGVEVMPILDRSV 147

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           E++I E D  + T RA G GGQ+VN  ++AVRI H+PTG+ V+C +ERSQ +NK +A  +
Sbjct: 148 ELDIPEKDLEVTTSRAGGKGGQNVNKVETAVRIVHLPTGLAVRCTEERSQLQNKEKALVL 207

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           L+AKL  +  ++R +          E  WG QIR+YV  PYQMVKDLRT +E T+ +DV+
Sbjct: 208 LKAKLLVVAREQRAKEIAEIRGDMVEAAWGNQIRNYVFHPYQMVKDLRTGVETTAIADVM 267

Query: 340 DGDLDDFMKATLAIK 354
           +G+L+ F++A L  +
Sbjct: 268 NGELEPFIQAYLRQE 282


>gi|217033144|ref|ZP_03438604.1| hypothetical protein HPB128_185g4 [Helicobacter pylori B128]
 gi|298736978|ref|YP_003729508.1| peptide chain release factor RF-1 [Helicobacter pylori B8]
 gi|216945129|gb|EEC23827.1| hypothetical protein HPB128_185g4 [Helicobacter pylori B128]
 gi|298356172|emb|CBI67044.1| peptide chain release factor RF-1 [Helicobacter pylori B8]
          Length = 352

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 104/345 (30%), Positives = 176/345 (51%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L       EL
Sbjct: 8   LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLEGIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES-LLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K ++E    +  +     D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P   D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++      +  K ++G G    +
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + + R N+   S  +++  G LD+ +   +A  +
Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGSLDEVINPLIAHAQ 348


>gi|194477029|ref|YP_002049208.1| peptide chain release factor 1 [Paulinella chromatophora]
 gi|171192036|gb|ACB42998.1| peptide chain release factor 1 [Paulinella chromatophora]
          Length = 366

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 101/348 (29%), Positives = 168/348 (48%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + A +    L  +  DP +  N  + +   RE   L+  +   K ++         + L
Sbjct: 10  LETATRTFENLERQLADPDVAVNPDQLQKFAREHSRLEPIVIDSKALKQAQKQREEAILL 69

Query: 76  ALEEDDCSILQETSDN-----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E  +   ++  ++       + I+   +      L     D     LE+ +G GG E+
Sbjct: 70  LREHRNDPEMEALANEEIGALDEVIERLTKQLTLALLPRDSRDERSVMLEIRSGTGGGEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+++   ++ +AL   + E  G +   L I+G   Y  LK E GVHR+
Sbjct: 130 CIWAGDLARMYERYSQSVGWQVQALSSSEAELGGFRELILAIRGEGVYSKLKYEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +E+++   D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADKVEVQLDPKDIEISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C QERSQ +N+ +A  +LRAKL  LE Q  E  A    + K ++G G 
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERALEILRAKL--LERQLAEAAAAESSARKAQVGTGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R   +  S   +L+G+L++ +   +A+ +
Sbjct: 307 RSEKIRTYNYKD-NRTTDHRLG-QNFSLDSILNGNLEEIIDTCIALDQ 352


>gi|12045113|ref|NP_072924.1| peptide chain release factor 1 [Mycoplasma genitalium G37]
 gi|255660257|ref|ZP_05405666.1| peptide chain release factor 1 [Mycoplasma genitalium G37]
 gi|1350577|sp|P47500|RF1_MYCGE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|1045950|gb|AAC71478.1| peptide chain release factor 1 [Mycoplasma genitalium G37]
 gi|166078949|gb|ABY79567.1| peptide chain release factor 1 [synthetic Mycoplasma genitalium
           JCVI-1.0]
          Length = 359

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 113/350 (32%), Positives = 180/350 (51%), Gaps = 14/350 (4%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
            F+ +  V+    L      P+L  +  + K++ +E +H    I   KE+Q  + +    
Sbjct: 8   FFNVEKIVELTEQLEKDLNKPNL--SFEQIKVINKELKHKQPLIVKFKELQKLVENANEA 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGT 128
            ++        + +E    L++IK  +   +    F  L   E +  +  +E+   AGG 
Sbjct: 66  EQILNNSSLKELHEEAKKELEKIKASLPSLEEEIKFLLLPVDENNQKNVIVEIRPAAGGD 125

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           ES  + + L  MY  +   + +  E  EI      GI   +  + G + +  LK E GVH
Sbjct: 126 ESCIFLSDLFNMYKNYCTSKNWTVELNEIIPASV-GINFVSFAVNGTDVFAKLKFESGVH 184

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS  ++ V P +++ +EI I+ SD RIDTYRASGAGGQHVN T+S
Sbjct: 185 RVQRVPLTEAKGRVHTSTVTVAVLPQLEE-VEITINPSDLRIDTYRASGAGGQHVNRTES 243

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITH+PTG+VV CQ+ +SQ  N+ +A  MLRAKL+E    K+          K+++G 
Sbjct: 244 AVRITHLPTGIVVACQEGKSQFSNRDKAMKMLRAKLWENAQNKQLSTQADL--RKSQVGS 301

Query: 309 GRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G +   IR+Y   P   + D R  +     + V+ GDLD+ ++A  A +K
Sbjct: 302 GERAEKIRTYNY-PQNRITDHRIKLTINKLNTVILGDLDEIIEALQADEK 350


>gi|269957243|ref|YP_003327032.1| peptide chain release factor 1 [Xylanimonas cellulosilytica DSM
           15894]
 gi|269305924|gb|ACZ31474.1| peptide chain release factor 1 [Xylanimonas cellulosilytica DSM
           15894]
          Length = 366

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 164/346 (47%), Gaps = 11/346 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            +   + +     DP +  +   A+ L R    L+  +   +       D     EL   
Sbjct: 12  LLAEHAEIERALADPAVHADAGRARTLGRRYAELNQVVGAYRAWAAARDDAEAAAELLEL 71

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTESQDWANM 136
            D             +       +    +L         D  LE+ AG GG ES  +A  
Sbjct: 72  SDGLEEELAAELPGLQAAEADAAEHLRRVLVPRDPDDGRDVILEIKAGEGGEESALFAGD 131

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHR 189
           LLRMY R+AE++ + T+ LE  D +  G K   + I        G   +  LK E GVHR
Sbjct: 132 LLRMYLRYAERKGWSTQVLEATDTDLGGYKDVQVAIKARSVNDPGDGVWAHLKYEGGVHR 191

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   ++  R HTS + + V+P VDD  E+EI  +D RID YR+SG GGQ VNTTDSA
Sbjct: 192 VQRVPVTETQGRIHTSAAGVLVFPEVDDPGEVEIDPNDLRIDVYRSSGPGGQSVNTTDSA 251

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308
           VRITH+PTG+VV  Q E+SQ +NK QA  +LRA+L   + ++    A     S+   +  
Sbjct: 252 VRITHLPTGIVVSMQNEKSQLQNKEQAMRVLRARLLAAQQEEAAAQAADLRRSQVRTVDR 311

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +IR+Y   P   + D RT  +  +   VL GDL+  +++ +   
Sbjct: 312 SERIRTYNF-PENRIADHRTGYKAYNLDAVLGGDLEPVVRSAIEAD 356


>gi|210134282|ref|YP_002300721.1| peptide chain release factor 1 [Helicobacter pylori P12]
 gi|238058714|sp|B6JPI0|RF1_HELP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|210132250|gb|ACJ07241.1| peptide chain release factor RF-1 [Helicobacter pylori P12]
          Length = 352

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 103/345 (29%), Positives = 173/345 (50%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L       EL
Sbjct: 8   LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLEGIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K       +   +     D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P   D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++      +  K ++G G    +
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + + R N+   S  +++  G LD+ +   +A  +
Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGSLDEVINPLIAHAQ 348


>gi|191166656|ref|ZP_03028484.1| peptide chain release factor 1 [Escherichia coli B7A]
 gi|190903305|gb|EDV63026.1| peptide chain release factor 1 [Escherichia coli B7A]
          Length = 321

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 109/310 (35%), Positives = 169/310 (54%), Gaps = 7/310 (2%)

Query: 50  QHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN-LQRIKLEVEYKQFESLL 108
             L +      + Q    D      +  + +   + Q+      ++ +   +  Q   L 
Sbjct: 4   ASLSDVSRCFTDWQQVQEDIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLP 63

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
               D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K  
Sbjct: 64  KDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEI 123

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
              I G   YG LK E G HR+ R+   +S  R HTS  ++ V P + D+   +I+ +D 
Sbjct: 124 IAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADL 183

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E
Sbjct: 184 RIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAE 243

Query: 289 LQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDD 345
           + KR++      + +  +G G    + R+Y   P   V D R N+      +V++G LD 
Sbjct: 244 MAKRQQ--AEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLDM 300

Query: 346 FMKATLAIKK 355
            ++  +   +
Sbjct: 301 LIEPIIQEHQ 310


>gi|316932075|ref|YP_004107057.1| peptide chain release factor 1 [Rhodopseudomonas palustris DX-1]
 gi|315599789|gb|ADU42324.1| peptide chain release factor 1 [Rhodopseudomonas palustris DX-1]
          Length = 361

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 101/349 (28%), Positives = 170/349 (48%), Gaps = 16/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L  +       ++      + RE   L+  +  +K  +    +   + EL
Sbjct: 9   LDVLLAHHAALEAQLMAQVGAED---YVRITRELSELNPLVEAVKSYRQVRDELGEIDEL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130
             +      ++  ++  +        +  + +          D  +  LE+ AG GG E+
Sbjct: 66  LEDPATEPEMRAMAEAERDALDAHRDELIQQIRIALLPKDAMDERNVMLEIRAGTGGDEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY ++A  + +  E +   +G   G K     +KG  A+  LK E GVHR+
Sbjct: 126 SLFAGDLFRMYEKFAALQGWSVEVISASEGTVGGFKEIIAEVKGRGAFAKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++++I + D RI+T RA GAGGQHVN T+SA+
Sbjct: 186 QRVPDTETQGRIHTSAATVAVLP-EVEDVDVDIKQEDLRIETMRAQGAGGQHVNKTESAI 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VV  Q  RSQHKN+A A N+LR+++Y+ E Q+ +  A      K ++G G 
Sbjct: 245 RITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAERQRVD--AARSAERKEKVGSGD 302

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V+ G+ L + + A     +
Sbjct: 303 RSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGEALGELIDALTTEHQ 350


>gi|317011921|gb|ADU82529.1| peptide chain release factor 1 [Helicobacter pylori Lithuania75]
          Length = 352

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 172/342 (50%), Gaps = 9/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + ++R   L        +  ++ +   L +E+  ++      KE    L       EL
Sbjct: 8   LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEYLSVLEGIKENKEL 67

Query: 76  ALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E    L+  K       +   +     D  + YLE+ AG GG E+  + 
Sbjct: 68  LEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFV 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +   +    G K    LIKG   Y  LK E G HR+ R+ 
Sbjct: 128 GDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQRVP 187

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P   D +E+ I+ SD +I+ +RA G GGQ VNTTDSAVRITH
Sbjct: 188 ETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITH 246

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PT + V  Q E+SQHKNK +A  +L+A+LYE ++++++      +  K ++G G    +
Sbjct: 247 LPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSER 304

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
           IR+Y   P   + + R N+   S  +++  G LD+ +   +A
Sbjct: 305 IRTYNY-PQNRLSEHRINLTLYSLEEIMLSGSLDEVINPLIA 345


>gi|162147699|ref|YP_001602160.1| peptide chain release factor 1 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209542323|ref|YP_002274552.1| peptide chain release factor 1 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|189039975|sp|A9HJ50|RF1_GLUDA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|161786276|emb|CAP55858.1| putative peptide chain release factor 1 [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209530000|gb|ACI49937.1| peptide chain release factor 1 [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 352

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 170/344 (49%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ-DRLCDNLILLE 74
            D  V R   L     +  +           RE   L+  +  I E++     +      
Sbjct: 7   LDRIVARSEELQAALAEGLV---GEAFAKASREYAELEPIVDRIGELRLAEQEERQSQAL 63

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           LA  E       E  D   RI +  +  +   L   EAD   A LE+   AGG E+  +A
Sbjct: 64  LADPEMRELAEAELEDLRARIPVLRQDIRIAMLPRDEADERSAILEIRPAAGGDEAALFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L   Y R+A  R ++ E +E  + E  G++     I G   +  LK E GVHR+ R+ 
Sbjct: 124 AELFDAYRRYAALRGWRFEIMEFDESELGGLREGIANITGRGVFARLKYESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P     ++++I++ D RID YRASGAGGQHVN T+SAVRITH
Sbjct: 184 ATESQGRIHTSTVTVAVLP-EAGDVDVQINDGDLRIDVYRASGAGGQHVNKTESAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV  Q+E+SQHKN+A+A  +L A+LY  E ++    A      K+++G G    +
Sbjct: 243 LPTGLVVAMQEEKSQHKNRAKAMKILMARLY--ERERAAAHATRAADRKSQVGTGDRSER 300

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       V+ G+ D+F+ A    ++
Sbjct: 301 IRTYNF-PQGRVTDHRINLTAYKIDRVMMGEFDEFVDALTQDEQ 343


>gi|297182760|gb|ADI18914.1| protein chain release factor a [uncultured SAR11 cluster bacterium
           HF0010_09O16]
          Length = 356

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 109/344 (31%), Positives = 179/344 (52%), Gaps = 15/344 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  + R S L       ++  +        +E   L+  ++  K+      D + L ++
Sbjct: 7   IEELISRHSSLEKDLASGNV--DKKLFAEKSKEYSDLNEIVNSAKKYASYKNDKIELEKI 64

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +++           E S+   + +   +  +   L   EAD  +A +E+ AG GG E+
Sbjct: 65  LNDKNSDEELMKMAHTELSELNSQFEQNEKKLKLFLLPKDEADKKNAIIEIRAGTGGLEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L +MY +   K+K+  E + I   +  G+K     IKG N Y  LK E GVHR+
Sbjct: 125 SLFAGDLFKMYEKVCNKKKWSLELISISRSDAGGLKEVIASIKGNNIYSTLKYESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++++I+E+D RID +RA G GGQ VNTTDSAV
Sbjct: 185 QRVPDTETQGRVHTSAATVAVLP-EAEEVDLKINETDLRIDVFRAGGPGGQSVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+P+G+ V  Q E+SQHKNKA+   +LRA+LYELE  + ++        K++IG G 
Sbjct: 244 RITHLPSGLSVSQQDEKSQHKNKAKGMKILRARLYELERTRIDQER--SADRKSKIGTGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
              +IR+Y   P   V D R N+      + L+G+  D+ +++ 
Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLHKLEEFLEGEAFDEIIESL 344


>gi|330863233|emb|CBX73359.1| peptide chain release factor 1 [Yersinia enterocolitica W22703]
          Length = 330

 Score =  193 bits (490), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 108/312 (34%), Positives = 163/312 (52%), Gaps = 7/312 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D ++  +    + L RE   L +     KE +    D      +
Sbjct: 9   LEALQERHEEVLAHLGDANVIADQDRFRALSREYAQLTDVTRCFKEWRSVQDDIEAAEMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+       R +   +  Q   L     D  D +LE+ AG GG E+  +A
Sbjct: 69  LDDPEMREMAQDELKEAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             + RMY+R+AE R++K E +   +GE  G K     + G   +G LK E G HR+ R+ 
Sbjct: 129 GDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVSGDGVFGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR++        +  +G G    +
Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQQ--AEASERRNLLGSGDRSDR 306

Query: 312 IRSYVLQPYQMV 323
            R+Y   P   V
Sbjct: 307 NRTYNF-PQGRV 317


>gi|187918069|ref|YP_001883632.1| peptide chain release factor 1 [Borrelia hermsii DAH]
 gi|238689283|sp|B2RZQ6|RF1_BORHD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119860917|gb|AAX16712.1| bacterial peptide chain release factor 1 [Borrelia hermsii DAH]
          Length = 357

 Score =  193 bits (489), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 127/339 (37%), Positives = 191/339 (56%), Gaps = 11/339 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              ++  L  K +D +L +N  E    ++E  +L+   +   E ++ L       ++  E
Sbjct: 9   IESKIKILEEKLQDINLVKNQKEYAKTVKEYNYLEKIKAKKDEYENILSQINENQKILSE 68

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           E++  + +     L  + L+ +  +       L   E DS +  +E+ AG GG E+  +A
Sbjct: 69  EENLEMKELVKQELAHLNLKKDEVEHMIKILLLHQDENDSKNIIIEIRAGTGGEEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           + L  MYT+++EK+K+KTE +  ++ E  G K  +  IKG + +  LK E GVHR+ R+ 
Sbjct: 129 HNLYEMYTKYSEKKKWKTELINFNETELGGFKEVSFEIKGKDVFKKLKHESGVHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +SN R  TS +++ V P V+D+    I+E D RID YR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 ITESNGRLQTSAATVAVLPEVEDTDIE-INEKDLRIDVYRSSGAGGQHVNTTDSAVRITH 247

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VVQCQ ERSQHKNK QA  +LRA+LYE E  K++E        K ++G G    +
Sbjct: 248 LPTGIVVQCQNERSQHKNKDQAMKILRARLYEFENLKKQE--QRSNDRKQQVGSGDRSER 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
           IR+Y   P   V D R NI      +++ G+LD  +   
Sbjct: 306 IRTYNF-PQNRVTDHRANISLYKLEEIMQGELDFLLDTL 343


>gi|295707229|ref|YP_003600304.1| peptide chain release factor 1 [Bacillus megaterium DSM 319]
 gi|294804888|gb|ADF41954.1| peptide chain release factor 1 [Bacillus megaterium DSM 319]
          Length = 325

 Score =  193 bits (489), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 100/321 (31%), Positives = 161/321 (50%), Gaps = 11/321 (3%)

Query: 42  AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN----LQRIKL 97
            +   +E+  +   ++  +E +D          +  ++ D  +     +       + + 
Sbjct: 1   MREYSKEQSDIQQTVAAYQEYKDVKEQLSEAKTMLEDKLDADMRDMVKEEIAELETQQEE 60

Query: 98  EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
            VE  +   +     D  +  +EV   AGG E+  +A  L RMY+R+AE + +KTE +E 
Sbjct: 61  LVEKLRILLIPKDPNDDKNVIMEVRGAAGGDEAALFAANLYRMYSRFAESQGWKTEVMEA 120

Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217
                 G K    +I G  AY  +K E G HR+ R+   +S  R HTS +++   P   +
Sbjct: 121 TTTGVGGYKEIIFMINGKGAYSKMKFENGAHRVQRVPETESGGRIHTSTATVACLP-EAE 179

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
            +E++I E D R+DT+ +SG GGQ VNTT SAVR+TH+PT  VV CQ E+SQ KNK +A 
Sbjct: 180 EVEVDIHEKDIRVDTFASSGPGGQSVNTTMSAVRLTHLPTNTVVSCQDEKSQIKNKEKAM 239

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTS 334
            +LRA++Y+    +RE  A    + K  +G G    +IR+Y   P   V D R  +    
Sbjct: 240 KVLRARVYDKF--QREAQAEYDATRKQAVGSGDRSERIRTYNF-PQNRVTDHRIGLTIQK 296

Query: 335 PSDVLDGDLDDFMKATLAIKK 355
              +L+G LD+ + A +   +
Sbjct: 297 LDQILEGKLDEIIDALVMEDQ 317


>gi|159475365|ref|XP_001695789.1| peptide chain release factor [Chlamydomonas reinhardtii]
 gi|158275349|gb|EDP01126.1| peptide chain release factor [Chlamydomonas reinhardtii]
          Length = 383

 Score =  193 bits (489), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 100/342 (29%), Positives = 174/342 (50%), Gaps = 14/342 (4%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
              L  +  DP +  +  E + + +    L+  ++  +  QD         +   EE   
Sbjct: 34  FKELQMRMADPEVAASATEFQKVAKAASDLETTVNTYRAYQDTEQQLADAQKYLKEEASS 93

Query: 83  SILQETSDNLQRIK------LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
                     +  +         +  + + +     D  +  LE+ AGAGG E+  WA  
Sbjct: 94  DPEMAEFAREEIAELEASLTKLQDALRLQLVPRDPLDDRNIMLEIRAGAGGDEASIWAGD 153

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L+RMY R+A K+ +K   +     E  G K   L I G + Y  LK E GVHR+ R+   
Sbjct: 154 LMRMYQRYANKQGWKASLVSCTQAEAGGYKEIILQINGDSVYSKLKWEAGVHRVQRVPAT 213

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           ++  R HTS +++ V P   + +++ ++ +D  +   RASGAGGQ+VN  ++AV + H P
Sbjct: 214 EAAGRVHTSTATVAVMP-EVEEVDVALNMNDIDLKFARASGAGGQNVNKVETAVDLMHKP 272

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+ V CQ+ER+Q +NK +A+ +LRAKLYELELQ+++    I  + K+++G G    +I+
Sbjct: 273 TGIRVFCQEERTQAQNKERAFQILRAKLYELELQRQQAE--IYAARKSQVGTGDRSEKIK 330

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y  +    V D R  +     + +++GDL+D ++A ++  +
Sbjct: 331 TYNYKD-SRVSDHRIKM-NFDLNSIIEGDLEDTLQAMISADQ 370


>gi|299132853|ref|ZP_07026048.1| peptide chain release factor 1 [Afipia sp. 1NLS2]
 gi|298592990|gb|EFI53190.1| peptide chain release factor 1 [Afipia sp. 1NLS2]
          Length = 358

 Score =  193 bits (489), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 106/349 (30%), Positives = 171/349 (48%), Gaps = 16/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72
            D  + R + L  +        +        RE   +   +  +K  +     + D   +
Sbjct: 7   LDILLARHAALEAELMAQ---VSAETYVRATRELAEISPVVEAVKAYRAGASEIADLEAM 63

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTES 130
           +     + D   + E+   +   + E   +Q    L  +      +  LE+ AG GG E+
Sbjct: 64  IADPATDADMRAMAESERPVLLERQESLEQQIRVALLPKDAMDERNVVLEIRAGTGGDEA 123

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A  + +K E +   +G   G K     ++G  A+  LK E GVHR+
Sbjct: 124 SLFAGDLFRMYERFAALQGWKVEVMSASEGTMGGYKEIVAEVQGRGAFAKLKFESGVHRV 183

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +++ R HTS +++ V P   + ++I+I +SD RI+T RA GAGGQHVN T+SA+
Sbjct: 184 QRVPDTEASGRIHTSAATVAVLP-EAEDVDIDIKDSDLRIETMRAQGAGGQHVNKTESAI 242

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG+VV  Q  RSQHKN+A A N+LR+++ + E Q+    A      + ++G G 
Sbjct: 243 RITHIPTGIVVMMQDSRSQHKNRASAMNILRSRVLDGERQR--AAAERSADRRGQVGSGD 300

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V+ G+ L + + A     +
Sbjct: 301 RSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGEALGELVDALTTEHQ 348


>gi|284046083|ref|YP_003396423.1| peptide chain release factor 1 [Conexibacter woesei DSM 14684]
 gi|283950304|gb|ADB53048.1| peptide chain release factor 1 [Conexibacter woesei DSM 14684]
          Length = 349

 Score =  193 bits (489), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 113/342 (33%), Positives = 173/342 (50%), Gaps = 14/342 (4%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL-A 76
               R   L  +  DP +  +        R+ + L+ A     E +  + D     EL  
Sbjct: 8   QVESRFQELEAQMSDPEVIGDRQRYAETGRQYRDLEEAARLAAEWRRAVDDEAGARELLE 67

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
              DD  +    +   +RI    E  +   +    AD  +  +E+  GAGG E+  +A  
Sbjct: 68  EGGDDAEVRDMLARARERIDALDEEIRLAMVEKDPADEKNVIVEIRPGAGGDEAGLFAGD 127

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L RM TR+AE+R FKTEAL   DG        T  +KG  AY   K E G HR+ R+   
Sbjct: 128 LYRMLTRYAERRGFKTEALSESDG------QYTFAVKGEGAYSVFKFEGGTHRVQRVPET 181

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS +++ V P   + +++E++++D ++D YR+SG GGQ VNTTDSAVRITH P
Sbjct: 182 ESQGRIHTSTATVAVLP-EAEEVDVEVNDNDLQVDVYRSSGPGGQSVNTTDSAVRITHKP 240

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IR 313
           +G+VV  Q E+SQ +N+ +A  +LRA+LYE  L +++    +  +   ++G G +   IR
Sbjct: 241 SGIVVSMQDEKSQLQNRDKAMRVLRARLYEAALAEQQAE--LSATRLAQVGSGERAEKIR 298

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   + D R  +   +    L G+LDD   A    +K
Sbjct: 299 TYNF-PQGRITDHRIKLTVHNLDAALAGELDDVTDALQDDEK 339


>gi|57504876|ref|ZP_00370851.1| peptide chain release factor 1 [Campylobacter coli RM2228]
 gi|305432416|ref|ZP_07401578.1| peptide chain release factor RF1 [Campylobacter coli JV20]
 gi|57019304|gb|EAL56006.1| peptide chain release factor 1 [Campylobacter coli RM2228]
 gi|304444455|gb|EFM37106.1| peptide chain release factor RF1 [Campylobacter coli JV20]
          Length = 355

 Score =  193 bits (489), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 119/345 (34%), Positives = 186/345 (53%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  ++R   LN+      +  ++ +   L +E+++L+  +   KE    L        L
Sbjct: 6   LDPFLKRFEELNSLLSSSDIISDISKMTALSKEQKNLEPIVLKAKEYLKTLDSIEENKTL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-LSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + +E   NL+ +K ++E +    L      D  + +LE+ AG GG E+  + 
Sbjct: 66  LNDAELGELAKEELKNLEELKPKLEEELKILLLPKDPNDERNIFLEIRAGTGGDEASLFV 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L++ Y R+AE R +K E +   +G   G K   +L+KG  A+  LK E G HR+ R+ 
Sbjct: 126 GDLVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGAGAFSRLKYEGGTHRVQRVP 185

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  +I V P   D IEIEI+ +D +ID  R+SG GGQ VNTTDSAVRITH
Sbjct: 186 QTESQGRIHTSAITIAVMP-EVDDIEIEINPNDLKIDVMRSSGHGGQSVNTTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV  Q  +SQHKNK  A  +L+A+LY  E+Q+ E +A   E+ K+++G G    +
Sbjct: 245 LPTGIVVVNQDGKSQHKNKESAMKVLKARLY--EMQESERLAQESEARKSQVGSGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
           IR+Y   P   + D R N+       +L DG  D+ ++  +A  +
Sbjct: 303 IRTYNF-PQNRISDHRINLTLYRLDAILQDGLFDEVIEPLIAHYQ 346


>gi|323342350|ref|ZP_08082582.1| peptide chain release factor RF1 [Erysipelothrix rhusiopathiae ATCC
           19414]
 gi|322463462|gb|EFY08656.1| peptide chain release factor RF1 [Erysipelothrix rhusiopathiae ATCC
           19414]
          Length = 359

 Score =  193 bits (489), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 101/346 (29%), Positives = 169/346 (48%), Gaps = 10/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC---DNLIL 72
            +    R   +        +  +      L +E+  +   +   ++  +          +
Sbjct: 10  LEKIQARDEEITEMMMSSEVLSDRKMMAKLGKEQSSMQQVLHAYRQFLEAEDFFTQAQEM 69

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L +   E       E+++  +++   +E  +   +    +DS DA +E+   AGG E   
Sbjct: 70  LAVDEPELQELAAMESAEYSEKMVKIIEELEVLLVPKDPSDSFDAIVEIRGAAGGDEGNI 129

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMYTR+AE   +K E +E  D E  G    + ++KG   +   K E G HR+ R
Sbjct: 130 FAGDLYRMYTRYAESLGYKYELIEAMDAEAGGYSLISFVVKGAEPFRHFKFESGAHRVQR 189

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +++ V     +  EI+I  +D  IDT R+SGAGGQHVN TDSAVRI
Sbjct: 190 VPKTETQGRIHTSTATVLVLA-DVEDEEIDIDPNDLEIDTMRSSGAGGQHVNKTDSAVRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
            H PTG+ V+CQ  RSQH NK +A  ++RA++YE   ++ +E        ++++G G   
Sbjct: 249 VHKPTGIAVKCQDGRSQHDNKDKAMRLVRARVYEEHQRRIQEER--HGERQSKVGTGARS 306

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R  +       +++G LD+ + A L  ++
Sbjct: 307 EKIRTYNY-PQNRVSDHRIGLTLQKLDIIMEGKLDEIVNALLEQEQ 351


>gi|27375329|ref|NP_766858.1| peptide chain release factor 1 [Bradyrhizobium japonicum USDA 110]
 gi|32171530|sp|Q89XT9|RF1_BRAJA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|27348465|dbj|BAC45483.1| peptide chain release factor 1 [Bradyrhizobium japonicum USDA 110]
          Length = 361

 Score =  192 bits (488), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 102/348 (29%), Positives = 165/348 (47%), Gaps = 24/348 (6%)

Query: 16  WDNAVQRLSFLNT----KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
            D  +   + L      +               + RE   +   I  +K  +  + +   
Sbjct: 9   LDVLLAHHASLEAESLGQLAS-------ERYVQITRELAEITPLIEAVKTYRSAVKELAD 61

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAG 126
              L  +    + ++  ++  +           + +          D  +  LE+ AG G
Sbjct: 62  TEALIADPATDAEMRGMAEAERDELAPRIEDLVQKIRVALLPKDAMDDRNVVLEIRAGTG 121

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  L RMY R+A  + +K E +   +G   G K     ++G  A+  LK E G
Sbjct: 122 GDEASLFAGDLFRMYERFASLQGWKVEVISASEGTVGGYKEIIAEVQGRGAFSKLKFESG 181

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   ++  R HTS +++ V P   + ++++I   D RI+T RA GAGGQHVN T
Sbjct: 182 VHRVQRVPDTETQGRIHTSAATVAVLP-EVEDVDVDIKNDDLRIETMRAQGAGGQHVNKT 240

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           +SA+RITHIPTG+VV  Q  RSQHKN+A A N+LR+++Y+ E Q+ +  A      K ++
Sbjct: 241 ESAIRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAERQRVD--AARSAERKEKV 298

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
           G G    +IR+Y   P   V D R N+       V+ G+ L + + A 
Sbjct: 299 GSGDRSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGEALGELIDAL 345


>gi|307265645|ref|ZP_07547198.1| peptide chain release factor 1 [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919289|gb|EFN49510.1| peptide chain release factor 1 [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 246

 Score =  192 bits (488), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 103/240 (42%), Positives = 153/240 (63%), Gaps = 7/240 (2%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +E+ AGAGG E+  +A+ L RMY+ +AEK+ +K E +  ++ +  G K   L I G  AY
Sbjct: 1   MEIRAGAGGEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGAY 60

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             LK E GVHR+ R+   ++  R HTS +++ V P   + +++EI+ SD +ID +R+ G 
Sbjct: 61  SRLKYESGVHRVQRVPTTEAGGRIHTSTATVAVLP-EVEEVDVEINPSDIKIDVFRSGGH 119

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVR+THIPTG+VV CQ ERSQ +N+ +A  +LRAKLYE+ LQ+++    I
Sbjct: 120 GGQSVNTTDSAVRVTHIPTGIVVTCQDERSQIQNRERALKILRAKLYEMALQEQQ--REI 177

Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            E+ K+++G G    +IR+Y   P   V D R  +      +VLDGDLD+ + A +   +
Sbjct: 178 AETRKSQVGTGERSERIRTYNF-PQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALILNDQ 236


>gi|319441088|ref|ZP_07990244.1| peptide chain release factor 1 [Corynebacterium variabile DSM
           44702]
          Length = 361

 Score =  192 bits (488), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 114/348 (32%), Positives = 172/348 (49%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +     L  +  DP L  +   A+ + +    L   I     +     D+    E+
Sbjct: 11  VDDILSEYQGLEMQLSDPVLHNDAAAARRVAKRFSELQPVIQTYNRLTQAREDHEAAAEM 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E+ + +   +          E              DS+D  +EV +GAGG E+  +A 
Sbjct: 71  ASEDAEFAAEADRLAAEIPALEEKLTDLL--APRDPHDSDDVVMEVKSGAGGEEAALFAG 128

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-----YGWLKGEQGVHRL 190
            L+RMY R+AEK  F  E L+ ++ +  G+K  T+ I+         +   K E GVHR+
Sbjct: 129 ELVRMYQRYAEKHGFTCEVLDTNETDLGGVKDLTMSIRSKQPTRDGAWSVFKFEGGVHRV 188

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            RI   +S  R  TS + + VYP  D+  +++I + D R+D YR+SG GGQ VNTTDSAV
Sbjct: 189 QRIPVTESQGRIQTSAAGVLVYPEPDEVEDVQIDDKDLRVDVYRSSGKGGQGVNTTDSAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307
           RITH+PTG+VV CQ+ERSQ +NKA+A  +L A+L   ++++ E  A   E    +I    
Sbjct: 249 RITHLPTGIVVTCQKERSQIQNKARAMQVLAARL--QQMKEEEADAAAAEGRHAQIRTMD 306

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   V D R   +  +   VLDGDL+    A     +
Sbjct: 307 RSERIRTYNF-PESRVSDHRIGYKANNLDAVLDGDLEALFGALHDADR 353


>gi|34557214|ref|NP_907029.1| peptide chain release factor 1 [Wolinella succinogenes DSM 1740]
 gi|46576699|sp|Q7M9M4|RF1_WOLSU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|34482930|emb|CAE09929.1| PEPTIDE CHAIN RELEASE FACTOR 1 [Wolinella succinogenes]
          Length = 355

 Score =  192 bits (488), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 99/341 (29%), Positives = 167/341 (48%), Gaps = 9/341 (2%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
           ++R   +        +  ++     L +E+  L+  +   KE             L  ++
Sbjct: 10  IERFEEITRLLGTMEVISDIKRMTELSKEQSALEALVLKAKEYLQTHRSIQENRALFEDK 69

Query: 80  D-DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +      +E     + ++      +   +     D  + YLE+ AG GG E+  +   L 
Sbjct: 70  ELGDLAKEENKLLEESLESLESEIKLLLIPKDPNDDKNIYLEIRAGTGGDEAGIFVGDLF 129

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           + Y R+A+ + +K E +   +    G K    LIKG   Y  LK E G HR+ R+   +S
Sbjct: 130 KSYCRYADLKGWKVEIISSSENSVGGYKEVIALIKGNGVYSRLKYEGGTHRVQRVPETES 189

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             R HTS  ++ + P   D +E+ I+ +D +ID +R+ G GGQ VNTTDSAVRITH+PTG
Sbjct: 190 QGRIHTSAITVAIMP-EVDDVEVNINPNDLKIDVFRSGGHGGQSVNTTDSAVRITHLPTG 248

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSY 315
           + V  Q E+SQHKNK +A  +L+A+LYE EL+   +++    + K ++G G    +IR+Y
Sbjct: 249 ISVSMQDEKSQHKNKDKALKILKARLYEAELE--AKLSENSAARKLQVGSGDRSERIRTY 306

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIKK 355
              P   + D R  +   S  +++  G+ D  +   +A  +
Sbjct: 307 NY-PQNRLTDHRIGLTLYSLEEIMLSGNFDQVVDPIVAHYQ 346


>gi|306842976|ref|ZP_07475610.1| peptide chain release factor 1 [Brucella sp. BO2]
 gi|306286904|gb|EFM58429.1| peptide chain release factor 1 [Brucella sp. BO2]
          Length = 315

 Score =  192 bits (487), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 109/308 (35%), Positives = 171/308 (55%), Gaps = 13/308 (4%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSG 110
           +  I+E+ D   +   L  +  +    + ++  +        +      +  Q   L   
Sbjct: 2   VGKIRELSDARKEASDLAAMRDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKD 61

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
            AD  +A LE+ AG GG E+  +A  L RMY R+A ++ ++ E +   +G+  G K    
Sbjct: 62  VADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 121

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            + G   +  LK E GVHR+ R+   ++  R HTS +++ V P   + I+IEI   D RI
Sbjct: 122 TVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRI 180

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E Q
Sbjct: 181 DTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQ 239

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           K    +   ++ ++++G G    +IR+Y   P   V D R N+       V++GDLD+ +
Sbjct: 240 K--AESERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGDLDELV 296

Query: 348 KATLAIKK 355
            A ++  +
Sbjct: 297 DALISDHQ 304


>gi|256751358|ref|ZP_05492237.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|256749740|gb|EEU62765.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus
           CCSD1]
          Length = 246

 Score =  192 bits (487), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 101/240 (42%), Positives = 153/240 (63%), Gaps = 7/240 (2%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +E+ AGAGG E+  +A+ L RMY+ +AEK+ +K E +  ++ +  G K   L I G  +Y
Sbjct: 1   MEIRAGAGGEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGSY 60

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             LK E GVHR+ R+   ++  R HTS +++ V P   + +++EI+ +D +ID +R+ G 
Sbjct: 61  SRLKYESGVHRVQRVPTTEAGGRIHTSTATVAVLP-EVEEVDVEINPNDIKIDVFRSGGH 119

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ VNTTDSAVR+THIPTG+VV CQ ERSQ +N+ +A  +LRAKLYE+ LQ+++    I
Sbjct: 120 GGQSVNTTDSAVRVTHIPTGIVVTCQDERSQIQNRERALKILRAKLYEMALQEQQ--REI 177

Query: 299 GESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            E+ K+++G G    +IR+Y   P   V D R  +      +VLDGDLD+ + A +   +
Sbjct: 178 AETRKSQVGTGERSERIRTYNF-PQGRVTDHRIGLTLYRLQEVLDGDLDEIIDALILNDQ 236


>gi|225022790|ref|ZP_03711982.1| hypothetical protein CORMATOL_02835 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305682007|ref|ZP_07404811.1| peptide chain release factor 1 [Corynebacterium matruchotii ATCC
           14266]
 gi|224944397|gb|EEG25606.1| hypothetical protein CORMATOL_02835 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305658480|gb|EFM47983.1| peptide chain release factor 1 [Corynebacterium matruchotii ATCC
           14266]
          Length = 360

 Score =  192 bits (487), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 110/346 (31%), Positives = 169/346 (48%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V     +  +  DP    +    + L +    L   +     ++    D     E+
Sbjct: 11  VDDIVSEYQGIEAQMSDPETVGDQALFRKLSKRYSELQPIMKVNTALEQARADLADAKEM 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D     E       +    E            D +D  +E+ AGAGG E+  +A 
Sbjct: 71  --AYEDSEFAPEADRLAGEVVELEEKLADLLAPRDPHDGDDIVMEIKAGAGGEEAALFAG 128

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA-----YGWLKGEQGVHRL 190
            L+RMY R+A+K  F TE L + + +  G+K  TL I+         +   K E GVHR+
Sbjct: 129 ELVRMYQRYADKHGFSTEVLGLSESDLGGVKDMTLSIRSKQPSRDGAWSVFKFEGGVHRV 188

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R  TS + + VYP  D+   +EI + D R+D YR+SG GGQ VNTTDSAV
Sbjct: 189 QRVPVTESQGRIQTSAAGVLVYPEPDEIAAVEIDDKDIRVDVYRSSGKGGQGVNTTDSAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG+VV CQ+ERSQ +NKA+A  +L A+L  L  ++ E  A  G +++   +   
Sbjct: 249 RITHLPTGIVVTCQKERSQIQNKARALQVLAARLQALAEEQAEAEAAQGRAAQIRTLDRS 308

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R   +  +   VL+GD++D   A    ++
Sbjct: 309 ERIRTYNW-PENRISDHRIGFKANNLDSVLNGDMEDLFTALRTAER 353


>gi|297183691|gb|ADI19816.1| protein chain release factor a [uncultured alpha proteobacterium
           EB000_37G09]
          Length = 357

 Score =  192 bits (487), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 115/348 (33%), Positives = 176/348 (50%), Gaps = 14/348 (4%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLILL 73
           +  + R   + ++           E   L RE   +      +   + +   L D   ++
Sbjct: 8   EKVLARREEIESQLSQSGSLS-SDELTKLSRELAEVRPVAEQVFVVRHLAQALADARQMI 66

Query: 74  ELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           E    + + + + ET  +    +        +   L     DS +A LEV AG GG E+ 
Sbjct: 67  EEEGADPEMAEMAETEISELGPQLTEAEHDLKLLLLPKDTDDSRNAILEVRAGTGGDEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L  MY R A +  +K E +EI +    G K AT  I G + +  LK E GVHR+ 
Sbjct: 127 LFAADLFGMYQRTASRYGWKFEVMEISETGIGGYKEATANISGQDVFARLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P     ++IE+SESD R+D +RASG GGQ VNTTDSAVR
Sbjct: 187 RVPETETGGRIHTSAATVAVLP-EAQDVDIEVSESDLRVDVFRASGPGGQSVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV  Q E+SQHKN+A+A  +LRA++Y+ E  +++       S K ++G G  
Sbjct: 246 ITHLPTGIVVSQQDEKSQHKNRAKAMKILRARIYDAERARQQAER--AASRKGQVGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
             +IR+Y   P   V D R N        VL G+ +D+ + A  +  +
Sbjct: 304 SERIRTYNF-PQGRVTDHRINFTLYKLDKVLAGEAIDEVIDALASEDQ 350


>gi|153005568|ref|YP_001379893.1| peptide chain release factor 2 [Anaeromyxobacter sp. Fw109-5]
 gi|152029141|gb|ABS26909.1| peptide chain release factor 2 [Anaeromyxobacter sp. Fw109-5]
          Length = 309

 Score =  192 bits (487), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 145/278 (52%), Positives = 194/278 (69%)

Query: 57  SFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND 116
           +    ++  L D   L ELA E  D +  QE +   + +  ++E  +F+ +LSGE D   
Sbjct: 3   AAYARVRRSLDDAEALAELADEARDEATRQEAAQQCEVVAKDLEALEFQKMLSGEHDRAG 62

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
           A +EV +GAGG E+ DWA ML RMYTR+ E+R +  E  ++  GEEAGI  A+ + +G  
Sbjct: 63  AIVEVKSGAGGVEAMDWAAMLYRMYTRYCERRGWSVEPADLVAGEEAGISQASFIARGEF 122

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           AYG+LK E+GVHRLVRISP+D  +RR TSF+++ V P ++D I ++I E+D RIDTYR+S
Sbjct: 123 AYGFLKAERGVHRLVRISPFDQAARRQTSFAAVDVTPEIEDDIVVDIKEADVRIDTYRSS 182

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQ VN TDSAVR+TH+PTG+VV  Q ERSQ KN+  AW +LRAKLYELE +KR E  
Sbjct: 183 GAGGQKVNKTDSAVRLTHLPTGIVVAVQNERSQQKNRGVAWKILRAKLYELEEKKRAEAR 242

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           +  E++K +I +G QIRSYVLQPY+MVKDLRT +E   
Sbjct: 243 DAVEATKKDIDFGSQIRSYVLQPYRMVKDLRTGVETGK 280


>gi|24212814|ref|NP_710295.1| peptide chain release factor 1 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|45656013|ref|YP_000099.1| peptide chain release factor 1 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|32171561|sp|Q8F9S6|RF1_LEPIN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|59798055|sp|Q72W38|RF1_LEPIC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|24193465|gb|AAN47313.1| peptide chain release factor 1 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|45599246|gb|AAS68736.1| peptide chain release factor 1 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 354

 Score =  192 bits (487), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 113/347 (32%), Positives = 177/347 (51%), Gaps = 14/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA---ISFIKEIQDRLCDNLIL 72
            +   ++   ++ +       ++    K L +ER  L      +    +I     D   L
Sbjct: 5   LEKIQEKYLRISEELNQ---AKDPSSLKNLYKERSRLTPLYLKVEEYLKIYKDRKDAEEL 61

Query: 73  LELALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           ++   +E+  S+L+E                +   L        +  +E+ AG GG E+ 
Sbjct: 62  IQSEKDEEMHSMLKEEIREANLKLETLEREFEILLLPPDPNSGKNILVEIRAGTGGEEAG 121

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L RMY+++A+K+K KTE ++       G+K     ++   AY   K E G HR+ 
Sbjct: 122 LFVADLFRMYSKFADKQKIKTEIIDSSPTGIGGLKEIIFALEDDRAYDLFKFEGGTHRVQ 181

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS  ++ V P   D  E++I+ESD RID YR+SGAGGQHVNTTDSAVR
Sbjct: 182 RIPSTESGGRIHTSAVTVAVLP-EADEEEVQINESDLRIDVYRSSGAGGQHVNTTDSAVR 240

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTGVVV CQ E+SQHKNKA+A  +L A++ E + + +++ ++  +  K  IG G  
Sbjct: 241 ITHIPTGVVVACQDEKSQHKNKAKALRILSARILEKQAEDKKQASDAIK--KQMIGSGDR 298

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             ++R+Y   P     D R      + S +++GDLD+ + A     +
Sbjct: 299 SERVRTYNF-PQGRCTDHRIGFTSHNLSAIMEGDLDELIGALTEEDR 344


>gi|158334426|ref|YP_001515598.1| peptide chain release factor 1 [Acaryochloris marina MBIC11017]
 gi|189039957|sp|B0C424|RF1_ACAM1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|158304667|gb|ABW26284.1| peptide chain release factor 1 [Acaryochloris marina MBIC11017]
          Length = 363

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 180/344 (52%), Gaps = 13/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q    L  +  DP +  N  E + + + R  L+  ++  ++ +    +     ++
Sbjct: 10  LKSVEQTFHELTRRLGDPEVATNPTEFQEVAKARASLEETVNTFEDWKATQQELADAQQM 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-----QFESLLSGEADSNDAYLEVHAGAGGTES 130
           A + D+   L+E +        E         +   L     D  +  LE+ AGAGG E+
Sbjct: 70  AKDGDEDPELKEMAAMEAAELTEKLDGLETKLKVLLLPRDPNDEKNIMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+R+Y+++AE +K++ + L    GE  G K A L I+G   Y  LK E GVHR+
Sbjct: 130 SIWAGDLVRIYSKYAESQKWRVKLLSESGGEMGGFKEAILEIQGERVYSKLKYEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +++ R HTS +++ V P   D +EIEI   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATEASGRVHTSTATVAVMP-EVDDVEIEIDPKDIEMSTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +NK +A  +LRAKLYE+ELQ+++  A++    ++++G G 
Sbjct: 249 DLVHKPTGIRIFCTEERSQLQNKERAMQILRAKLYEMELQEQQ--ASVTSMRRSQVGTGA 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              +IR+Y  +      D R N +      VL GD++  ++  +
Sbjct: 307 RSEKIRTYNYKD-NRATDHRLN-QNFPLEKVLVGDIELILETCI 348


>gi|254293181|ref|YP_003059204.1| peptide chain release factor 1 [Hirschia baltica ATCC 49814]
 gi|254041712|gb|ACT58507.1| peptide chain release factor 1 [Hirschia baltica ATCC 49814]
          Length = 359

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 108/349 (30%), Positives = 172/349 (49%), Gaps = 17/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               + R      +     +  +  E   L ++   L       +E+ D          +
Sbjct: 9   LTQVIDRFEQTEARMS---VATDPTEIVQLSKDHAELKLVADKARELMDAREALAEADAI 65

Query: 76  ALEEDDCSILQETSDNLQRIKL-----EVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             ++D  + ++E +   +           +  Q   L   E D  +A LEV AG GG E+
Sbjct: 66  LSDKDSDADMKELAQEEREELKSSLPELEQSLQLLLLPKDEDDEANAMLEVRAGTGGDEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A+ + +K +     +G+  G K     + G   +G +K E GVHR+
Sbjct: 126 ALFAGDLFRMYQRYAQIQGWKLDIESQSEGDAGGYKEIIASVTGKGVFGKMKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +S+ V P   + + IEI   + RIDT R+SGAGGQHVNTTDSAV
Sbjct: 186 QRVPKTESAGRIHTSAASVAVLP-APEQVNIEIKPEEIRIDTMRSSGAGGQHVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RI H+PT ++V    E+SQH N+A+A  ML+ +LYE E  +++  A + ++ KT++G G 
Sbjct: 245 RIIHLPTNIMVTSS-EKSQHANRARAMEMLKIRLYEKERAEKD--AAMADARKTQVGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
              +IR+Y   P   V D R  +       +L GD + + + A +A  +
Sbjct: 302 RSEKIRTYNF-PENRVSDHRIKLTLYKLEQILAGDSISEVIDALIAEDQ 349


>gi|256827314|ref|YP_003151273.1| peptide chain release factor 1 [Cryptobacterium curtum DSM 15641]
 gi|256583457|gb|ACU94591.1| bacterial peptide chain release factor 1 (bRF-1) [Cryptobacterium
           curtum DSM 15641]
          Length = 357

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 114/349 (32%), Positives = 174/349 (49%), Gaps = 15/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  ++    L T+  DP +  +  E   L +E  H     +  +     + D     E+
Sbjct: 7   LEKIIEAYRDLQTRMSDPAVISDQKEYNRLAKEYAHQGPLATAARTYVQDIDDLAEAKEM 66

Query: 76  ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D     QE    ++       +  +F  + +  AD  D  +E+ AGAGG E+  +A
Sbjct: 67  ISDADMREFAQEEITRIENELPGLEDDIKFMLIPADPADDKDIIVEIRAGAGGDEAALFA 126

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L +MY+ +A+ + +K E L     E  G K     +KG   Y  +K E GVHR+ R+ 
Sbjct: 127 GDLFKMYSHFADVKGWKIEVLNASASEAGGYKEIQFKVKGDKVYSEMKFESGVHRVQRVP 186

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS +++ V P   D +E+++ + D RID YRA G GGQ VNTTDSAVRITH
Sbjct: 187 KTESQGRIHTSTATVAVLP-EADEVEVDVKQEDLRIDVYRAGGPGGQCVNTTDSAVRITH 245

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VVQ Q ++SQ +NK  A  +LRA+LYE  L+++   A  G   + +IG G    +
Sbjct: 246 LPTGLVVQSQDQKSQLQNKIAAMAVLRARLYEKMLEEQR--AAEGAERRAQIGTGDRSEK 303

Query: 312 IRSYVLQPYQMVKDLRTNIE-KTSPSDVL--DG--DLDDFMKATLAIKK 355
           IR+Y   P   V D R       +   +L   G   L+D + A  A  +
Sbjct: 304 IRTYN-GPQDRVTDHRIGYNGTYN--GILMNAGGAGLEDLITALQAADR 349


>gi|15644115|ref|NP_229164.1| peptide chain release factor 1 [Thermotoga maritima MSB8]
 gi|7388056|sp|Q9X183|RF1_THEMA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|52695394|pdb|1RQ0|A Chain A, Crystal Structure Of Peptide Releasing Factor 1
 gi|52695395|pdb|1RQ0|B Chain B, Crystal Structure Of Peptide Releasing Factor 1
 gi|52695396|pdb|1RQ0|C Chain C, Crystal Structure Of Peptide Releasing Factor 1
 gi|4981923|gb|AAD36433.1|AE001790_5 peptide chain release factor RF-1 [Thermotoga maritima MSB8]
          Length = 342

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 114/326 (34%), Positives = 171/326 (52%), Gaps = 18/326 (5%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
               P L     + K    E   ++   +    I++      +L             +  
Sbjct: 11  LLARPDLT--PEQMKNYGMEYAKIEEIENITNRIKETQEFIELL---------REEGENE 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            +  +  K   +  Q    L     S+ A +E+  G GG E+  +A  L RMYTR+AE++
Sbjct: 60  LEIEKYEKELDQLYQELLFLLSPEASDKAIVEIRPGTGGEEAALFARDLFRMYTRYAERK 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +  E  EIH+ +  GI+     +KG NAYG LK E GVHR+ R+   +S  R HTS ++
Sbjct: 120 GWNLEVAEIHETDLGGIREVVFFVKGKNAYGILKYESGVHRVQRVPVTESGGRIHTSTAT 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P +++     I   D +I+T+RASG GGQ+VN T+SAVRITH+PTG+VV CQ ERS
Sbjct: 180 VAVLPEIEEKDIE-IRPEDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERS 238

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKD 325
           Q++NK  A  +LRA+LY+L  QK ++   I +  K++IG G +   IR+Y   P   V D
Sbjct: 239 QYQNKQTALRILRARLYQL--QKEQKEREISQKRKSQIGTGERSEKIRTYNF-PQNRVTD 295

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
            R N       ++LDGDLD+ +   +
Sbjct: 296 HRINYTSYRLQEILDGDLDEIISKLI 321


>gi|260879267|ref|ZP_05891622.1| peptide chain release factor 1 [Vibrio parahaemolyticus AN-5034]
 gi|308089661|gb|EFO39356.1| peptide chain release factor 1 [Vibrio parahaemolyticus AN-5034]
          Length = 325

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 107/311 (34%), Positives = 164/311 (52%), Gaps = 9/311 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  +  + + L +E   L+      +  Q    D     E+
Sbjct: 9   LETLVERYEEVQHLLGDPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQDDLAAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE---YKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           A E+D+        +     +         Q   L     D  + +LE+ AGAGG E+  
Sbjct: 69  AKEDDEEMREMAQEEIKDAKEAIERLADELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+++AEKR ++ E +  ++ E  G K     + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RI
Sbjct: 189 VPATESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG VV+CQ ERSQHKNKA+A  +L A++ + E ++R     + ++ +  +G G   
Sbjct: 249 THLPTGTVVECQDERSQHKNKAKAMAVLAARIVQAEQERRAAE--VSDTRRNLLGSGDRS 306

Query: 310 RQIRSYVLQPY 320
            +IR+Y   P 
Sbjct: 307 DRIRTYNY-PQ 316


>gi|6469929|gb|AAF13494.1|AF130466_1 peptide chain release factor 2 [Campylobacter jejuni]
          Length = 269

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 150/260 (57%), Positives = 188/260 (72%), Gaps = 2/260 (0%)

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           +  +   +   LLSGE D  +A + +H GAGGTES DWA++L RMY R+ E+  FK E L
Sbjct: 10  EDTITSLEISMLLSGENDGKNAIVSIHPGAGGTESNDWASILYRMYLRFCEREGFKVETL 69

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           +  +GEEAG+K  + L+KG NAYG+LK E G+HRLVR SP+DS  RRHTSFSS+ V P +
Sbjct: 70  DFQEGEEAGLKDVSFLVKGENAYGYLKAENGIHRLVRTSPFDSAGRRHTSFSSVMVSPEL 129

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD IEIEI E D RID YRASGAGGQHVN T+SAVRITH PTG+VVQCQ +RSQHKNKA 
Sbjct: 130 DDDIEIEIEEKDIRIDYYRASGAGGQHVNKTESAVRITHFPTGIVVQCQNDRSQHKNKAT 189

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A+ ML+++LYELEL K+++ AN     K+EIGWG QIRSYVL PYQ VKD R+    +  
Sbjct: 190 AFKMLKSRLYELELMKQQDSANT--GEKSEIGWGHQIRSYVLFPYQQVKDNRSGEAFSQV 247

Query: 336 SDVLDGDLDDFMKATLAIKK 355
            ++LDGD+   ++  L   K
Sbjct: 248 DNILDGDIKKMIEGVLIALK 267


>gi|332671313|ref|YP_004454321.1| peptide chain release factor 1 [Cellulomonas fimi ATCC 484]
 gi|332340351|gb|AEE46934.1| peptide chain release factor 1 [Cellulomonas fimi ATCC 484]
          Length = 362

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 166/344 (48%), Gaps = 11/344 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            +   + +  +  DP +  +   A+ L R    L       +  +    D     ELA  
Sbjct: 11  LLDEHAEIEARLADPAVHADAALARRLGRRYAELGRVAQAYRAWRAASDDAEAAAELAEV 70

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           ++  +       ++ R            +     D+ D  LE+ AG GG ES  +A  LL
Sbjct: 71  DEAFAAELPALQDVARTAEARLRDVL--VPRDPDDARDVILEIKAGEGGEESALFAGDLL 128

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLV 191
           RMYTR+AE+  ++T+ LE  + +  G K   L +            +  LK E GVHR+ 
Sbjct: 129 RMYTRYAERMGWQTQVLESTESDLGGFKDVHLSVKARGAVAPEDGVWAHLKYEGGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS + + V P  +D  E++I  +D RID YR+SG GGQ VNTTDSAVR
Sbjct: 189 RVPVTESQGRIHTSAAGVLVLPEAEDEGEVDIDPNDLRIDVYRSSGPGGQSVNTTDSAVR 248

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGR 310
           ITH+PTG+VV  Q E+SQ +N+ QA  +LRA+L     ++    A+    S+   +    
Sbjct: 249 ITHLPTGIVVSMQNEKSQLQNREQAMRVLRARLLAARQEEAAAAASQARRSQVRTVDRSE 308

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   + D RT  +  +   VL GDL   +++ +   
Sbjct: 309 RIRTYNF-PENRIADHRTGYKAYNLDAVLGGDLGPVVQSAIDAD 351


>gi|168056816|ref|XP_001780414.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668174|gb|EDQ54787.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 362

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 122/354 (34%), Positives = 183/354 (51%), Gaps = 19/354 (5%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            G+        R S LN    +        E   L +E   L++ ++ I  +++   +  
Sbjct: 7   RGML---AIEHRHSRLNQALSESAAC--PDEIIRLSKELSKLEDLMACITSLKNTRKEIE 61

Query: 71  ILLELALEEDDCSILQETSDNLQRIK-----LEVEYKQFESLLSGEADSNDAYLEVHAGA 125
            L  L  E  +   +++ +    R        +++      L   EADS    LEV AG 
Sbjct: 62  GLKMLIEESAEDEDMKQAAAEELRSVSNLETEDLQRMLLLMLPKDEADSRGCILEVRAGT 121

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A+ + RMY R+A+K+ +  E L I      G K A+  I G   YG LK E 
Sbjct: 122 GGDEASLFASDIFRMYERYAQKKLWSFEVLSITQTNSKGYKEASASITGDGVYGKLKFES 181

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   + + R HTS +S+ V P   D +++++   D RIDTYRA GAGGQH NT
Sbjct: 182 GVHRVQRVPVTEKSGRVHTSAASVAVLPQ-ADEVDVQMRNEDLRIDTYRAGGAGGQHANT 240

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T SAVR+TH+PTG+V+  Q ERSQH N+A++  +LRAKL+E E  ++    +       +
Sbjct: 241 TSSAVRVTHLPTGIVIAIQDERSQHMNRAKSLKLLRAKLFERERMQQAMARSTLRLE--Q 298

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           IG G    +IR+Y   P   V D R NI + S   ++ G+ LD F+ A L +K+
Sbjct: 299 IGSGDRSERIRTYNF-PQGRVTDHRVNITQHSIVQIMQGEGLDGFIDA-LTMKQ 350


>gi|93279782|pdb|2FVO|A Chain A, Docking Of The Modified Rf1 X-Ray Structure Into The Low
           Resolution Cryo-Em Map Of E.Coli 70s Ribosome Bound With
           Rf1
          Length = 333

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 114/326 (34%), Positives = 171/326 (52%), Gaps = 18/326 (5%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
               P L     + K    E   ++   +    I++      +L             +  
Sbjct: 11  LLARPDLT--PEQMKNYGMEYAKIEEIENITNRIKETQEFIELL---------REEGENE 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            +  +  K   +  Q    L     S+ A +E+  G GG E+  +A  L RMYTR+AE++
Sbjct: 60  LEIEKYEKELDQLYQELLFLLSPEASDKAIVEIRPGTGGEEAALFARDLFRMYTRYAERK 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +  E  EIH+ +  GI+     +KG NAYG LK E GVHR+ R+   +S  R HTS ++
Sbjct: 120 GWNLEVAEIHETDLGGIREVVFFVKGKNAYGILKYESGVHRVQRVPVTESGGRIHTSTAT 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P +++     I   D +I+T+RASG GGQ+VN T+SAVRITH+PTG+VV CQ ERS
Sbjct: 180 VAVLPEIEEKDIE-IRPEDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERS 238

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKD 325
           Q++NK  A  +LRA+LY+L  QK ++   I +  K++IG G +   IR+Y   P   V D
Sbjct: 239 QYQNKQTALRILRARLYQL--QKEQKEREISQKRKSQIGTGERSEKIRTYNF-PQNRVTD 295

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
            R N       ++LDGDLD+ +   +
Sbjct: 296 HRINYTSYRLQEILDGDLDEIISKLI 321


>gi|293189723|ref|ZP_06608439.1| peptide chain release factor 1 [Actinomyces odontolyticus F0309]
 gi|292821313|gb|EFF80256.1| peptide chain release factor 1 [Actinomyces odontolyticus F0309]
          Length = 364

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 108/344 (31%), Positives = 156/344 (45%), Gaps = 11/344 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            +Q    +  +  DP    +    + + R    L    +    +     D     ELA E
Sbjct: 13  LLQEYEQVEAQMADPQTLADPQLMRRVGRRYAELGRVKAAADRLASASGDLEAARELAAE 72

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +   +      +  +    E   K          D+ D  LE+ AG GG ES  +A+ L 
Sbjct: 73  DRSFADEIPALEEEEAAAHEALVKIL--APRDPEDAMDVILEIKAGEGGEESALFASDLA 130

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLV 191
           RMY R+AE   +    +     E  G K  TL I            +  LK E GVHR+ 
Sbjct: 131 RMYARYAEAHGWSVTEMSATHTELGGFKDITLAIRAKGTPAPDEGVWAHLKYEGGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS + ++V P ++D  EI I  +D RID YR+SG GGQ VNTTDSAVR
Sbjct: 191 RVPVTESQGRIHTSAAGVFVMPEIEDDEEIVIDPNDLRIDVYRSSGPGGQSVNTTDSAVR 250

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGR 310
           ITHIP+G+VV  Q E+SQ +NK  A  +L ++L      K+E  A+    S+   +    
Sbjct: 251 ITHIPSGIVVSMQNEKSQLQNKEAALRVLASRLAAEARAKKEAEASAQRLSQVRTVDRSE 310

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   + D RT  +  +   VL G LD  + +     
Sbjct: 311 RIRTYNF-PENRIADHRTGFKAHNLDAVLSGALDAVIASLQEAD 353


>gi|154509273|ref|ZP_02044915.1| hypothetical protein ACTODO_01798 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798907|gb|EDN81327.1| hypothetical protein ACTODO_01798 [Actinomyces odontolyticus ATCC
           17982]
          Length = 364

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 156/344 (45%), Gaps = 11/344 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            +Q    +  +  DP    +    + + R    L    +    +     D     ELA E
Sbjct: 13  LLQEYEQVEAQMADPQTLADPQLMRRVGRRYAELGRVKAAADRLASASGDLEAARELAAE 72

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +   +      +  +    E   K          D+ D  LE+ AG GG ES  +A+ L 
Sbjct: 73  DRSFADEIPALEEEEAAAHEALVKIL--APRDPEDAMDVILEIKAGEGGEESALFASDLA 130

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLV 191
           RMY R+AE   +    +     E  G K  TL I            +  LK E GVHR+ 
Sbjct: 131 RMYARYAEAHGWSVTEMSATHTELGGFKDITLAIRAKGTPAPDEGVWAHLKYEGGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS + ++V P ++D  EI I  +D RID YR+SG GGQ VNTTDSAVR
Sbjct: 191 RVPVTESQGRIHTSAAGVFVMPEIEDDEEIVIDPNDLRIDVYRSSGPGGQSVNTTDSAVR 250

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGR 310
           ITHIP+G+VV  Q E+SQ +NK  A  +L ++L      ++E  A+    S+   +    
Sbjct: 251 ITHIPSGIVVSMQNEKSQLQNKEAALRVLASRLAAEARARKEAEASAQRLSQVRTVDRSE 310

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +IR+Y   P   + D RT  +  +   VL G LD  + +     
Sbjct: 311 RIRTYNF-PENRIADHRTGFKAHNLDAVLSGALDAVIASLQEAD 353


>gi|126643323|ref|YP_001086307.1| peptide chain release factor 2 [Acinetobacter baumannii ATCC 17978]
          Length = 278

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 155/268 (57%), Positives = 197/268 (73%), Gaps = 1/268 (0%)

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +L+LA+E DD S+L++    L   + E+   +F  + S   D N  Y+E+ AG+GGTE+Q
Sbjct: 1   MLDLAVEADDESLLEDVQSELSTAEEELAKLEFRRMFSNPMDPNPCYVEIQAGSGGTEAQ 60

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
           DWA+MLLRMY RW E+  FK E +E+ DG+ AGIKSAT+ ++G  AYGWL+ E GVHRLV
Sbjct: 61  DWASMLLRMYMRWIERHGFKAELMEVSDGDVAGIKSATIRVEGEYAYGWLRTESGVHRLV 120

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS +RRHTSFS++++ P VDD+IEI+I+ SD R DTYRASGAGGQH+N TDSAVR
Sbjct: 121 RKSPFDSGNRRHTSFSAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVR 180

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +THIPTG+VV CQ +RSQH N+  AW  LRAKLYELE+QKR E A   E SK++IGWG Q
Sbjct: 181 LTHIPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMQKRNEAAQALEDSKSDIGWGSQ 240

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           IRSYVL     +KDLRT +E       L
Sbjct: 241 IRSYVLDD-SRIKDLRTGVEIQILVRFL 267


>gi|269215990|ref|ZP_06159844.1| peptide chain release factor 1 [Slackia exigua ATCC 700122]
 gi|269130249|gb|EEZ61327.1| peptide chain release factor 1 [Slackia exigua ATCC 700122]
          Length = 356

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 115/347 (33%), Positives = 168/347 (48%), Gaps = 14/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               ++  + +  K  DP +  +  E   L +E  +    +    +      D     E+
Sbjct: 9   LTKIIEGYAEIEEKLGDPAVLADQREYTRLSKEFANQAALVGKANDYLQACRDIDDAKEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY-KQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D     QET    +     +    +   +    AD  D  +E+   AGG E+  +A
Sbjct: 69  LGDPDMREFAQETIAESEAKLPALAETIKVMLIPDDPADEKDIIVEIRGAAGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L +MY R+ E R +K E L+    E  G K     +KG + Y  +K E GVHR+ R+ 
Sbjct: 129 GDLYKMYVRFCESRGWKVENLDASASEAGGFKKIEFKVKGDHVYSLMKFESGVHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R  TS +++ V P   D I++EI+E D RID YRA G GGQ VNTTDSAVRITH
Sbjct: 189 KTESQGRIQTSTATVAVLP-EADEIDVEINEGDLRIDVYRAGGPGGQCVNTTDSAVRITH 247

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +P+G+VVQ Q ++SQ +NK  A  +LRA+LYE  L +++  A  G     +IG G    +
Sbjct: 248 LPSGLVVQSQDQKSQLQNKIAAMAVLRARLYEKMLAEQQ--AAEGAERLAQIGSGDRAEK 305

Query: 312 IRSYVLQPYQMVKDLRTNIE-KTSPSDVL--DGDLDDFMKATLAIKK 355
           IR+Y   P   V D R       +   VL  DG L D + A  A  +
Sbjct: 306 IRTYN-APQDRVTDHRIGYNGTYN--GVLLADG-LADLIVALQAADR 348


>gi|170289255|ref|YP_001739493.1| peptide chain release factor 1 [Thermotoga sp. RQ2]
 gi|281412857|ref|YP_003346936.1| peptide chain release factor 1 [Thermotoga naphthophila RKU-10]
 gi|170176758|gb|ACB09810.1| peptide chain release factor 1 [Thermotoga sp. RQ2]
 gi|281373960|gb|ADA67522.1| peptide chain release factor 1 [Thermotoga naphthophila RKU-10]
          Length = 342

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 116/326 (35%), Positives = 172/326 (52%), Gaps = 18/326 (5%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
               P L     + K    E   ++   +    I++      +L             +  
Sbjct: 11  LLARPDLT--PEQMKNYGIEYAKIEEIENIANRIKETQEFIELL---------REEGENE 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            +  +  K   +  Q   LL      + A +E+  GAGG E+  +A  L RMYTR+AE++
Sbjct: 60  LEIEKYEKELDQLYQELLLLLSSEVGDKAIVEIRPGAGGEEAALFARDLFRMYTRYAERK 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +  E  EIH+ +  GI+     +KG NAYG LK E GVHR+ RI   +S  R HTS ++
Sbjct: 120 GWNLEVAEIHETDLGGIREVVFFVKGKNAYGILKYESGVHRVQRIPVTESGGRIHTSTAT 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P +++     I   D +I+T+RASG GGQ+VN T+SAVRITHIPTG+VV CQ ERS
Sbjct: 180 VAVLPEIEEKDIE-IRPEDLKIETFRASGHGGQYVNKTESAVRITHIPTGIVVSCQNERS 238

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKD 325
           Q++N+  A  +LRA+LY+L  QK ++   I +  K++IG G +   IR+Y   P   V D
Sbjct: 239 QYQNRQTALRILRARLYQL--QKEQKEREISQKRKSQIGTGERSEKIRTYNF-PQNRVTD 295

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
            R N       ++LDGDLD+ +   +
Sbjct: 296 HRINYTSYRLQEILDGDLDEIISKLI 321


>gi|32267276|ref|NP_861308.1| peptide chain release factor 1 [Helicobacter hepaticus ATCC 51449]
 gi|46576742|sp|Q7VFA0|RF1_HELHP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|32263329|gb|AAP78374.1| peptide chain release factor 1 [Helicobacter hepaticus ATCC 51449]
          Length = 355

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 110/345 (31%), Positives = 180/345 (52%), Gaps = 9/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               V R   +++      +  N+ +   L +E+  +++     K     L + +    L
Sbjct: 6   LKPIVARYDEISSLLSSESVLSNIKQLTELSKEQSDIESIAQNAKTYFSILENIVQNKAL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             +++   + +E   +L+  K    E  +   +     D+ + YLE+ AG GG E+  + 
Sbjct: 66  LEDKELGELAKEELKDLESAKATLEEEIKLLLIPKDPNDNKNIYLEIRAGTGGDEAGIFV 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L + Y R+A+ +K+K E +  ++    G K    L+KG  AY  LK E G HR+ R+ 
Sbjct: 126 GDLFKAYCRYADLQKWKVEIISSNENNVGGYKEVIALVKGNGAYSKLKFEGGTHRVQRVP 185

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ + P   D +EI I+ +D +ID +R+ G GGQ VNTTDSAVRITH
Sbjct: 186 ETESQGRIHTSAITVAIMP-EVDDVEININPNDLKIDVFRSGGHGGQSVNTTDSAVRITH 244

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTG+ V  Q E+SQHKNK +A  +L+A+LYE EL+ +       E+ KT++G G    +
Sbjct: 245 IPTGISVSMQDEKSQHKNKDKALKILKARLYEAELEAQNAQNK--EARKTQVGSGDRSER 302

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           IR+Y   P   + D R  +   S  +++ G  LD+F+   +A  +
Sbjct: 303 IRTYNY-PQNRLTDHRIGLTLYSLEEIMLGGLLDEFINPLIAHAQ 346


>gi|312194810|ref|YP_004014871.1| peptide chain release factor 1 [Frankia sp. EuI1c]
 gi|311226146|gb|ADP79001.1| peptide chain release factor 1 [Frankia sp. EuI1c]
          Length = 360

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 116/332 (34%), Positives = 174/332 (52%), Gaps = 13/332 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + +  +  DP +  +V EA+ L R    L   +   +EI+    D     EL
Sbjct: 5   LERMLDEHAVIEKRLADPAVHNDVGEARALGRRYAELAPIVELAREIEQANGDLETAREL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D S   E +D    I+   +  +     +   D  DA LEV AGAGG ES  +A 
Sbjct: 65  --AVEDPSFRAEVTDLETAIQDRRQRLRTLLAPTDPDDGRDAILEVKAGAGGEESALFAG 122

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG--------PNAYGWLKGEQGV 187
            LLRMY R+AE+R +KTE LE +  +  G +  ++ +K         P  YG L+ E GV
Sbjct: 123 DLLRMYLRYAERRGWKTEILEANPSDLGGYRDVSVAVKYRGQVPPGQPGVYGRLRFEGGV 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS + + V P   + ++++I  +D RID +R+SG GGQ VNTTD
Sbjct: 183 HRVQRVPVTESAGRIHTSAAGVLVMP-EAEEVDVQIDPNDLRIDVFRSSGPGGQSVNTTD 241

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-I 306
           SAVRITH+PTGVVV CQ E+SQ +NK  A  +LRA+L  +  +K E   +   +S+   +
Sbjct: 242 SAVRITHVPTGVVVSCQNEKSQLQNKESALRILRARLLTVAREKAESEKSAARASQVRTM 301

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
               ++R+Y   P   + D R N +  +   V
Sbjct: 302 DRSDKVRTYNF-PENRIADHRVNYKAHNLEAV 332


>gi|295698346|ref|YP_003603001.1| peptide chain release factor 2 [Candidatus Riesia pediculicola
           USDA]
 gi|291156977|gb|ADD79422.1| peptide chain release factor 2 [Candidatus Riesia pediculicola
           USDA]
          Length = 369

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 154/373 (41%), Positives = 228/373 (61%), Gaps = 24/373 (6%)

Query: 1   MKLSRQLNC----------LGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQ 50
           M++ + L            L  +F ++     L+ L  K     +W     +K L     
Sbjct: 1   MEIKKILEDFKRSYREFQNLKNIFRYEEKKIELTTLRNKISSNEIW----RSKKLSS-LI 55

Query: 51  HLDNAISFIKEIQ-------DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ 103
            L   ++  +            L +  IL+E   E+ D   L+ET  +L  ++  +E  +
Sbjct: 56  GLQKLVAIKEIEIEKIEKIKQYLENIEILIECLKEKRDEDFLKETYRDLFNVRSMIENLK 115

Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
              L S E D  D Y+++ +G+GG +SQDW +MLL+MY +W++ + F++  L    GE  
Sbjct: 116 IFRLFSKENDFCDCYIDLQSGSGGIDSQDWTSMLLKMYLKWSDLKNFRSYVLNTSYGEIT 175

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI-E 222
           GIKS+T++IKG  AYGWL+ E G+HRLVR SP+DS+ RRHTSFSS++VYPV++D  +   
Sbjct: 176 GIKSSTIMIKGRYAYGWLRTETGIHRLVRKSPFDSSGRRHTSFSSVFVYPVLEDPDQEIR 235

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I  SD +ID+Y++SGAGGQH N T+SA+RITHIPTG+V QCQ  RSQHKNK QA   L+ 
Sbjct: 236 IQSSDLKIDSYKSSGAGGQHTNKTESAIRITHIPTGIVTQCQSNRSQHKNKEQALKQLKN 295

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           KLYE++ ++++E   + E++K +I WG QIRSY+L  +  VKDLRT IE+ +   VL+G 
Sbjct: 296 KLYEIQKKEKQENQKVIENNKFDIAWGNQIRSYILD-HSRVKDLRTGIEERNVRSVLEGK 354

Query: 343 LDDFMKATLAIKK 355
           +D F+KA L ++K
Sbjct: 355 IDKFIKANLILRK 367


>gi|303279527|ref|XP_003059056.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226458892|gb|EEH56188.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 337

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 109/337 (32%), Positives = 173/337 (51%), Gaps = 9/337 (2%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            D  +    L+ L+ +  +  LW +   AK +M +   +   +      +D+L D    L
Sbjct: 1   LDPPSLRAMLADLDKRASEATLWDDPKNAKAVMEQLADVREQLELAAAFEDKLGDARTAL 60

Query: 74  ELALEEDDCSILQETSDNLQRI----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           E+  ++    ++ E +  +       +  +E  +   LL G  D+  A + ++AG GG +
Sbjct: 61  EMIADDPSSDVVPELASEISDAIASLEAALETWETRRLLVGTYDALGATVFINAGFGGFD 120

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           + +WA  L   Y  WA +R F         GEE G++S TL I G  AYG+L  E+G HR
Sbjct: 121 AHEWAERLESCYVAWARRRGFAVRVEARTPGEEVGLRSVTLEIDGRFAYGYLASEKGAHR 180

Query: 190 LVRISPYDSNSRR--HTSFSSIWVYPV---VDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           +VRI      + R  H++F ++ V P       SI     +    I T R+ GAGGQ+VN
Sbjct: 181 MVRIGGVAGQTPRGRHSNFVAVDVAPTLEEKARSIHWSPYDRVRVITTMRSGGAGGQNVN 240

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
             ++AVR+ H+PTG+VV+C++ERSQ  N+A+A   L+AKL  +  ++R            
Sbjct: 241 KVETAVRMKHLPTGIVVRCEEERSQAMNRAKAIARLKAKLAAVAEERRLADVAAVRGDVV 300

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
               G+QIR+YVL PY++VKD+RT +E +    VL G
Sbjct: 301 RAERGQQIRNYVLHPYKLVKDVRTGVETSDVDGVLSG 337


>gi|296775701|gb|ADH42977.1| protein chain release factor A [uncultured SAR11 cluster alpha
           proteobacterium H17925_38M03]
          Length = 358

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 109/345 (31%), Positives = 177/345 (51%), Gaps = 14/345 (4%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           + + +   L  +     +  +        +E  +L + I   K       +   L  +  
Sbjct: 9   DIINKHMSLEKELSTGDI--DPKLFAKKSKEYSNLGSIIDSAKSFVKFDNEKKDLENIVK 66

Query: 78  EEDDCSIL-----QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           ++ +   +     ++ S+  +R +      +   L   E D  +A +E+ AG GG E+  
Sbjct: 67  DKTNDPEMIDLAEKDLSELFKRREKWENDLKIFLLPKDEDDDKNAIVEIRAGTGGLEASL 126

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +   L +MY +   K+K+  E + I   E  G K     + G + Y +LK E GVHR+ R
Sbjct: 127 FCADLFKMYEKVCSKKKWNLEIINISKSEAGGFKEVIFSVNGNDIYSYLKYESGVHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           I   ++  R HTS +++ V P   + ++IEI ESD R+D +RA G GGQ VNTTDSAVRI
Sbjct: 187 IPETETQGRVHTSAATVAVLP-EVEEVDIEIKESDLRVDVFRAGGPGGQSVNTTDSAVRI 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           THIP+GVVV  Q E+SQHKNKA+A  +LR+++YE E +K+++      + +++IG G   
Sbjct: 246 THIPSGVVVSQQDEKSQHKNKAKALKILRSRVYEAEKRKKDQER--SSNRRSQIGSGDRS 303

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            +IR+Y   P   V D R N+      + L GD+ + M   L ++
Sbjct: 304 ERIRTYNF-PQGRVTDHRINLTLHKLEEFLSGDIHEEMNQELRLQ 347


>gi|326510949|dbj|BAJ91822.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 411

 Score =  190 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 97/348 (27%), Positives = 181/348 (52%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLIL 72
            D+  +    ++ +  DP +  +  E + L +   +L   ++     KE + ++ +   L
Sbjct: 54  LDSTEKAWKEMSIRLGDPDIVSDPGEYQKLAQSVSNLGEVVTAYGEFKECERQIEETKAL 113

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQF--ESLLSGEADSNDAYLEVHAGAGGTES 130
            +   ++ D + +  +       +L    ++     L S   +S +  LEV AG GG E+
Sbjct: 114 QKENGDDPDMAEMIASELESLSDQLAELEERLTVLLLPSDPLNSRNILLEVRAGTGGDEA 173

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY R+ E   +K + +   + E+ G K+  + +KG   Y  LK E GVHR+
Sbjct: 174 GIWAGDLVRMYQRYCELNNWKFKPVSCSEAEKGGFKTYVMEVKGKQVYSKLKFESGVHRV 233

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P   D +++ I   D  +   R+ GAGGQ+VN  ++A+
Sbjct: 234 QRVPQTETMGRVHTSTATVAIMP-EADEVDVVIDPKDIELKAARSGGAGGQNVNKVETAI 292

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + C +ERSQ +NK +A+ +LRAKLYE++L++++E  +I      ++G G 
Sbjct: 293 DLIHKPTGIRIFCTEERSQLQNKERAFQLLRAKLYEIKLREQQE--SIRTQRLLQVGTGA 350

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R  +     S  L GD++  +++  A+++
Sbjct: 351 RSEKIRTYNYKD-NRVTDHRLKM-NFILSSFLLGDIESAIQSCAALEQ 396


>gi|313837661|gb|EFS75375.1| peptide chain release factor 1 [Propionibacterium acnes HL037PA2]
 gi|314972601|gb|EFT16698.1| peptide chain release factor 1 [Propionibacterium acnes HL037PA3]
          Length = 388

 Score =  190 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 111/343 (32%), Positives = 169/343 (49%), Gaps = 8/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  +  +  +P +  +      L +    L + +S    +     D     +L
Sbjct: 36  IDEIRRRLREIEIQLANPAVLSDPSAMGRLGKRHARLRHVVSVADNVDQLNADIEAAEDL 95

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D   +QE      ++ L           S   D  DA +E+H+G GG ES  +A 
Sbjct: 96  --ANEDPVFVQEAERLRGQLDLARTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 153

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192
            LLRMYTR+AE+  +    L     +  G ++  + +       AYG+LK E GVHR+ R
Sbjct: 154 DLLRMYTRYAERVGWSVRELTSELTDLGGYRTVVVAVGGVPSRPAYGYLKHEGGVHRVQR 213

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S+ R HTS   + V P VD++    I  +D R+D YR+SG GGQ VNTTDSAVR+
Sbjct: 214 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPADIRVDVYRSSGPGGQGVNTTDSAVRL 272

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311
           TH+PTG+VV CQ ERSQ +NKA+A  MLRAK+  L  Q+  +  +     +   +    +
Sbjct: 273 THLPTGIVVSCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 332

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +R+Y   P   + D R   +      +L GDL + + A  A +
Sbjct: 333 VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGEVLDALHADE 374


>gi|90422036|ref|YP_530406.1| peptide chain release factor 1 [Rhodopseudomonas palustris BisB18]
 gi|119361591|sp|Q21BZ9|RF1_RHOPB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|90104050|gb|ABD86087.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodopseudomonas
           palustris BisB18]
          Length = 361

 Score =  190 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 103/349 (29%), Positives = 170/349 (48%), Gaps = 16/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L  + +   +  +      LMRE   L+  I  +K  +    +   +  L
Sbjct: 9   LDVLLAHHASLENQLQSQ-VGADT--YVKLMRELAELNPLIEAVKAYRQVGAERGEIDAL 65

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  ++         E +  + +          D  +  LE+ AG GG E+
Sbjct: 66  LADAATDAEMRAMAEAEHAALEAQEAELAQQIRVALLPKDAMDDRNVMLEIRAGTGGDEA 125

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY ++A  + +  E +   +G   G K     +KG  A+  LK E GVHR+
Sbjct: 126 SLFAGDLFRMYEKFAVLQGWSVEVVSASEGTMGGYKEIIAEVKGRGAFAKLKFESGVHRV 185

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++++I   D RI+T RA GAGGQHVN T+SA+
Sbjct: 186 QRVPDTETQGRIHTSAATVAVLP-EVEEVDVDIKPDDLRIETMRAQGAGGQHVNKTESAI 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG+ V  Q  RSQHKN+A A N+LR+++Y+ E Q+ + +       K ++G G 
Sbjct: 245 RITHIPTGLQVMMQDSRSQHKNRASAMNILRSRIYDAEQQRIDSVR--SAERKEKVGSGD 302

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
              +IR+Y   P   V D R N+       V+ G+ L + + A     +
Sbjct: 303 RSERIRTYNF-PQGRVTDHRINLTLYKLPQVIAGEALGELIDALTTEHQ 350


>gi|314927458|gb|EFS91289.1| peptide chain release factor 1 [Propionibacterium acnes HL044PA1]
          Length = 388

 Score =  190 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 110/343 (32%), Positives = 168/343 (48%), Gaps = 8/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  +  +  +P +  +      L +    L + +S    +     D     +L
Sbjct: 36  IDEIRRRLREIEIQLANPAVLSDPSAMGRLGKRHARLRHVVSVADNVDQLNADIEAAEDL 95

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D   +QE      ++ L           S   D  DA +E+H+G GG ES  +A 
Sbjct: 96  --ANEDPVFVQEAERLRGQLDLARTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 153

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192
            LLRMYTR+AE+  +    L     +  G ++  + +       AYG+LK E GVHR+ R
Sbjct: 154 DLLRMYTRYAERVGWSVRELTSELTDLGGYRTVVVAVGGVPSRPAYGYLKHEGGVHRVQR 213

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S+ R HTS   + V P VD++    I  +D R+D YR+SG GGQ VNTTDSAVR+
Sbjct: 214 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPADIRVDVYRSSGPGGQGVNTTDSAVRL 272

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311
           TH+PTG+V  CQ ERSQ +NKA+A  MLRAK+  L  Q+  +  +     +   +    +
Sbjct: 273 THLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 332

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +R+Y   P   + D R   +      +L GDL + + A  A +
Sbjct: 333 VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGEVLDALHADE 374


>gi|297570956|ref|YP_003696730.1| peptide chain release factor 1 [Arcanobacterium haemolyticum DSM
           20595]
 gi|296931303|gb|ADH92111.1| peptide chain release factor 1 [Arcanobacterium haemolyticum DSM
           20595]
          Length = 370

 Score =  190 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 102/349 (29%), Positives = 164/349 (46%), Gaps = 12/349 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           D  V     +  +   P +     + + L R    L   +S  +  +    D   + E+ 
Sbjct: 8   DAMVAEYQHIEEQMASPEVLARPEKLRSLGRRYAQLGRVVSRYRTWEKAEADLADIREII 67

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGAGGTESQDWA 134
               D + L E                     +     DS DA +EV AG GG ES  +A
Sbjct: 68  ELGGDDAELFEEELPRLEEAASTAAASLRDALIPRDPDDSRDAIVEVKAGEGGEESALFA 127

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI--------KGPNAYGWLKGEQG 186
             L+RMY R+AE + +  + L     E  G K   L +             +  LK E G
Sbjct: 128 ADLVRMYQRYAESKGWSVQTLSATHTELGGYKDIQLAVKSSSIPEDPADGVWAHLKFEAG 187

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS + + V+  VD+  E+++++++ RID +R+SG GGQ VNTT
Sbjct: 188 VHRVQRVPATESQGRIHTSAAGVLVFAEVDEPEEVQVADNELRIDVFRSSGPGGQSVNTT 247

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE- 305
           DSAVRITH+PTG+ V  Q E+SQ KN+  A  +L A+L +L+L+++         S+   
Sbjct: 248 DSAVRITHLPTGITVSMQDEKSQIKNREAAMRVLLARLRQLQLEEQAAKEADQRRSQVRT 307

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +    ++R+Y   P   + D RT  +  +   VL+G+L+  + +   + 
Sbjct: 308 VDRSERVRTYNF-PENRIADHRTGYKAHNLDAVLNGELEPVITSLREMD 355


>gi|54023021|ref|YP_117263.1| peptide chain release factor 1 [Nocardia farcinica IFM 10152]
 gi|61214587|sp|Q5Z0Z2|RF1_NOCFA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|54014529|dbj|BAD55899.1| putative peptide chain release factor 1 [Nocardia farcinica IFM
           10152]
          Length = 356

 Score =  190 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 112/329 (34%), Positives = 168/329 (51%), Gaps = 9/329 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +   + L T+  DP L  +   A+ + +    L   ++  ++++    D     EL
Sbjct: 7   IDDILAEHAGLETQLADPTLHNDPSAARRVGKRFAELAPIMATYRKLESARADLTAAREL 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A ++   +      +       +              D +D  LEV +G GG ES  +A 
Sbjct: 67  AADDASFAAEVPELERQVDELEQALADLL--APRDPHDGDDVVLEVKSGEGGEESALFAA 124

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190
            L RMY R+AE+R ++ E L+    +  G K ATL IK         +   K E GVHR+
Sbjct: 125 DLARMYMRYAERRGWRVEVLDATVSDLGGYKEATLSIKSRDAARDGVWSRFKFEGGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + +YP  D+  E++I ESD RID YR+SG GGQ VNTTDSAV
Sbjct: 185 QRVPVTESQGRIHTSAAGVLIYPEPDEVAEVQIDESDLRIDVYRSSGKGGQGVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG+VV CQ ERSQ +NKA+A  +L A+L  L  ++ E+ A  G +S+   +   
Sbjct: 245 RITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQALAEEQAEQEAAAGRASQIRTVDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
            +IR+Y   P   + D R   +  +   V
Sbjct: 305 ERIRTYNF-PENRITDHRIGYKSHNLDAV 332


>gi|26553517|ref|NP_757451.1| peptide chain release factor 1 [Mycoplasma penetrans HF-2]
 gi|32171558|sp|Q8EWY5|RF1_MYCPE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|26453523|dbj|BAC43855.1| peptide chain release factor 1 [Mycoplasma penetrans HF-2]
          Length = 359

 Score =  190 bits (481), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 175/344 (50%), Gaps = 14/344 (4%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           +  ++ + LN + E   L  +V     + +  +     +   KE +  L D     +L  
Sbjct: 13  SMEEKFNDLNKELETEGL--SVKRMSEINKSIKETTPIVEKFKEYKRTLNDIDSAEKLIK 70

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQDW 133
            E D  I++     L   K  +E  ++E           D  +  +E+   AGG ES  +
Sbjct: 71  SEKDNEIIELAQLELSEKKPLIEKYEYELKVLLLPKDPNDDKNVIVEMRPAAGGDESSIF 130

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
              L   Y R+A+   +K + LE+ +    G    + +I G N Y  +K E GVHR+ R+
Sbjct: 131 VGDLFSAYKRYADSLGWKVKMLEVQESSH-GYGFISFMINGENVYSKMKFESGVHRVQRV 189

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS  ++ V P   + +E+ I+ SD +IDTYRASGAGGQH+N T+SAVRIT
Sbjct: 190 PATESKGRVHTSTITVAVLP-ELEEVELVINNSDLKIDTYRASGAGGQHINKTESAVRIT 248

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ-- 311
           HIPTG+ V CQ+ +SQ +N+  A  MLRAKL+  E ++ E   NI +  K ++G G +  
Sbjct: 249 HIPTGIFVACQEGKSQIENRETAMKMLRAKLW--EKKEEENRKNISDLRKGQVGTGERAE 306

Query: 312 -IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            IR+Y   P   V D R N+      +V+ G+L + + + ++  
Sbjct: 307 KIRTYNY-PQNRVTDHRINLTLNKLDNVMLGNLSEIIDSLISHD 349


>gi|312601125|gb|ADQ90380.1| Peptide chain release factor 1 [Mycoplasma hyopneumoniae 168]
          Length = 357

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 111/348 (31%), Positives = 173/348 (49%), Gaps = 7/348 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+      Q+   L    E   +  +  +   + +E   +   I   ++  D       
Sbjct: 1   MFNSLMKIHQKYQDLKQLLETDQILNDQKQYLQIAKEIASISEIIEVFQKFLDDQKVLED 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGG 127
              + ++EDD  ++Q     +  +   +E  +       L   + D  D  +E+   AGG
Sbjct: 61  AKTILIQEDDPELIQLAKVEIATMSKNIEEYEKKLLILMLPKDKNDEKDVIVEIRGAAGG 120

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +   L +MY +WA+ +K K + L        G       I G   Y  LK E GV
Sbjct: 121 DEANIFVGDLFKMYHKWADSQKAKVKVLSSSLALAGGFSQIIFQISGQKIYSKLKFESGV 180

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS +++ V P +D+ IEIEI+ SD +IDTYR+SGAGGQ VNTTD
Sbjct: 181 HRVQRVPATETMGRIHTSTATVTVMPKIDEKIEIEINPSDLKIDTYRSSGAGGQSVNTTD 240

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITHIPTG+V   Q ERSQ  NK  A  +L++K+Y LELQK+++  +          
Sbjct: 241 SAVRITHIPTGIVATSQDERSQIGNKEIAMGILKSKIYNLELQKQQQKQSDFRKLAGSGA 300

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y   P   + D R N   +    ++ G+L+  ++A LA +K
Sbjct: 301 RSEKIRTYNY-PQDRLTDHRINFSTS-LKPIIQGNLNPIIEALLAQEK 346


>gi|148270549|ref|YP_001245009.1| peptide chain release factor 1 [Thermotoga petrophila RKU-1]
 gi|147736093|gb|ABQ47433.1| bacterial peptide chain release factor 1 (bRF-1) [Thermotoga
           petrophila RKU-1]
          Length = 342

 Score =  189 bits (480), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 115/326 (35%), Positives = 172/326 (52%), Gaps = 18/326 (5%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
               P L     + K    E   ++   +    I++      +L             +  
Sbjct: 11  LLARPDLT--PEQMKNYGMEYAKIEEIENITNRIKETQEFIELL---------REEGENE 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
            +  +  K   +  Q   LL      + A +E+  GAGG E+  +A  L RMYTR+AE++
Sbjct: 60  LEIEKYEKELDQLYQELLLLLSSEVGDKAIVEIRPGAGGEEAALFARDLFRMYTRYAERK 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            +  E  EIH+ +  GI+     +KG NAYG LK E GVHR+ R+   +S  R HTS ++
Sbjct: 120 GWNLEVAEIHETDLGGIREVVFFVKGKNAYGILKYESGVHRVQRVPVTESGGRIHTSTAT 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + V P +++     I   D +I+T+RASG GGQ+VN T+SAVRITH+PTG+VV CQ ERS
Sbjct: 180 VAVLPEIEEKDIE-IRPEDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERS 238

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKD 325
           Q++NK  A  +LRA+LY+L  QK ++   I +  K++IG G +   IR+Y   P   V D
Sbjct: 239 QYQNKQTALRILRARLYQL--QKEQKEREISQKRKSQIGTGERSEKIRTYNF-PQNRVTD 295

Query: 326 LRTNIEKTSPSDVLDGDLDDFMKATL 351
            R N       ++LDGDLD+ +   +
Sbjct: 296 HRINYTSYRLQEILDGDLDEIISKLI 321


>gi|54020410|ref|YP_115756.1| peptide chain release factor 1 [Mycoplasma hyopneumoniae 232]
 gi|61214589|sp|Q601F9|RF1_MYCH2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|53987583|gb|AAV27784.1| peptide chain release factor 1 (RF-1), peptide termination factor
           [Mycoplasma hyopneumoniae 232]
          Length = 361

 Score =  189 bits (479), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 112/350 (32%), Positives = 174/350 (49%), Gaps = 7/350 (2%)

Query: 11  GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
             +F+      Q+   L    E   +  +  +   + +E   +   I   ++  D     
Sbjct: 3   KKMFNSLMKIHQKYQDLKQLLETDQILNDQKQYLQIAKEIASITEIIEVFQKFLDDQKVL 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGA 125
                + ++EDD  ++Q     +  +   +E  +       L   + D  D  +E+   A
Sbjct: 63  EDAKTILIQEDDPELIQLAKVEIATMSKNIEEYEKKLLILMLPKDKNDEKDVIVEIRGAA 122

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +   L +MY +WA+ +K K + L        G       I G   Y  LK E 
Sbjct: 123 GGDEANIFVGDLFKMYHKWADSQKAKVKVLSSSLALAGGFSQIIFQISGQKIYSKLKFES 182

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   ++  R HTS +++ V P +D+ IEIEI+ SD +IDTYR+SGAGGQ VNT
Sbjct: 183 GVHRVQRVPATETMGRIHTSTATVTVMPKIDEKIEIEINPSDLKIDTYRSSGAGGQSVNT 242

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITHIPTG+VV  Q ERSQ  NK  A  +L++K+Y LELQK+++  +        
Sbjct: 243 TDSAVRITHIPTGIVVTSQDERSQIGNKEIAMGILKSKIYNLELQKQQQKQSDFRKLAGS 302

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                +IR+Y   P   + D R N   +    ++ G+L+  ++A LA +K
Sbjct: 303 GARSEKIRTYNY-PQDRLTDHRINFSTS-LKPIIQGNLNPIIEALLAQEK 350


>gi|330813117|ref|YP_004357356.1| peptide chain release factor 1 [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327486212|gb|AEA80617.1| peptide chain release factor 1 [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 357

 Score =  189 bits (479), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 110/335 (32%), Positives = 170/335 (50%), Gaps = 14/335 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ V R + L +      +  +  E     +E   +   I  IK   D + D   L ++
Sbjct: 7   LESIVNRYNDLESSLSKTDI--DKKEFVKNSKEYSSIGEIIETIKSYIDAIKDKEDLKKI 64

Query: 76  ALEED-----DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             ++D           +  +   + +   +  +   L   EAD  +A +E+ AG GG E+
Sbjct: 65  LSDKDSDIEIREMAEHDLEEIKSKEQEYEKKVKVFLLPKDEADEKNAIVEIRAGTGGLEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A+ L  MY + +    ++ E L +   E  G K     I G N +  LK E GVHR+
Sbjct: 125 SLFASDLFNMYQKVSSINGWRVEVLSVSASEAGGYKEIVFTITGKNVFSKLKFESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V     + ++++I E+D RID +R+ G GGQ VNTTDSAV
Sbjct: 185 QRVPDTETQGRVHTSAATVAVLA-EAEEVDVKIDENDLRIDVFRSGGPGGQSVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTGVVV  Q E+SQHKNKA+A  +LR++LYE E  + E   ++    K++IG G 
Sbjct: 244 RITHIPTGVVVAIQDEKSQHKNKAKAMTILRSRLYEAERLRLENERSVA--RKSQIGTGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
              +IR+Y   P   V D R N+     +  L GD
Sbjct: 302 RSERIRTYNF-PQGRVSDHRINLTLHKLTGFLAGD 335


>gi|145222895|ref|YP_001133573.1| peptide chain release factor 1 [Mycobacterium gilvum PYR-GCK]
 gi|315443360|ref|YP_004076239.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp.
           Spyr1]
 gi|189039980|sp|A4T8L3|RF1_MYCGI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145215381|gb|ABP44785.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium
           gilvum PYR-GCK]
 gi|315261663|gb|ADT98404.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium sp.
           Spyr1]
          Length = 357

 Score =  189 bits (479), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 106/324 (32%), Positives = 159/324 (49%), Gaps = 9/324 (2%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
                L  +  DP L  +   A+ + R    +   ++  ++++    D     ELA ++ 
Sbjct: 13  AEYGELEQRLADPDLHADAGAARKVGRRFAQISPIVATYRKLEAARGDLEAARELAADDA 72

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRM 140
             +   +   +                     D++D  LEV +G GG ES  +A  L RM
Sbjct: 73  SFAAEVDELTDQIGDLDRALTDLL--APRDPHDADDIVLEVKSGEGGEESALFAADLARM 130

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQGVHRLVRISP 195
           Y R+AE+  +    L     +  G K ATL I          +  LK E GVHR+ R+  
Sbjct: 131 YIRYAERHGWTVTMLGETTSDLGGYKDATLSIASKGDSADGVWARLKFEGGVHRVQRVPV 190

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS + + VYP  D+  +++I ESD R+D YR+SG GGQ VNTTDSAVRITH+
Sbjct: 191 TESQGRVHTSAAGVLVYPEPDEVEQVQIDESDLRVDVYRSSGKGGQGVNTTDSAVRITHL 250

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRS 314
           PTG+VV CQ ERSQ +NKA+A  +L A+L  L  ++    A+   +S+   +    +IR+
Sbjct: 251 PTGIVVTCQNERSQLQNKARAMQVLAARLQALAEEQASADASADRASQIRTVDRSERIRT 310

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDV 338
           Y   P   + D R N +  +   V
Sbjct: 311 YNF-PENRIADHRINFKAHNLDQV 333


>gi|328907544|gb|EGG27310.1| peptide chain release factor 1 [Propionibacterium sp. P08]
          Length = 361

 Score =  189 bits (479), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 110/343 (32%), Positives = 168/343 (48%), Gaps = 8/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  +  +  +P +  +      L +    L + +S    +     D     +L
Sbjct: 9   IDEIRRRLREIEIQLANPAVLSDPSAMGRLGKRHARLRHVVSVADNVDQLNADIEAAEDL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D   +QE      ++ L           S   D  DA +E+H+G GG ES  +A 
Sbjct: 69  --ANEDPVFVQEAERLRGQLDLARTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 126

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192
            LLRMYTR+AE+  +    L     +  G ++  + +       AYG+LK E GVHR+ R
Sbjct: 127 DLLRMYTRYAERVGWSVRELTSELTDLGGYRTVVVAVGGVPSRPAYGYLKHEGGVHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S+ R HTS   + V P VD++    I  +D R+D YR+SG GGQ VNTTDSAVR+
Sbjct: 187 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPADIRVDVYRSSGPGGQGVNTTDSAVRL 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311
           TH+PTG+V  CQ ERSQ +NKA+A  MLRAK+  L  Q+  +  +     +   +    +
Sbjct: 246 THLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +R+Y   P   + D R   +      +L GDL + + A  A +
Sbjct: 306 VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGEVLDALHADE 347


>gi|320334062|ref|YP_004170773.1| peptide chain release factor 1 [Deinococcus maricopensis DSM 21211]
 gi|319755351|gb|ADV67108.1| Peptide chain release factor 1 [Deinococcus maricopensis DSM 21211]
          Length = 362

 Score =  188 bits (478), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 100/351 (28%), Positives = 164/351 (46%), Gaps = 17/351 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72
                     +     DP++  +  + + + R  + L   ++  +E      +  D   L
Sbjct: 6   LAALEHEYEQVEAHLADPNIISDQGQYRRVARRHRELTPIVNLWREYCTLDTQARDAREL 65

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           L      D      + S+    ++      +   L +   D +D  +E+ AGAGG E+  
Sbjct: 66  LSDPEMRDLARADLDASEAR--MRAIDTELEVLLLPTDPHDPHDCIVEIRAGAGGDEAAL 123

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LL MY R+AE    K   L+ ++ +  G+   T  + G  A+   + E+GVHR+ R
Sbjct: 124 FAADLLSMYERYAEGAGLKLAVLDANESDLGGLSKVTFEVTGDGAFRAFRFERGVHRVQR 183

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P V+D+    +  S+ RID +R+ GAGGQ VNTTDSAVR 
Sbjct: 184 VPATETQGRIHTSTVTVAVLPQVEDAEVD-LDLSEVRIDVFRSQGAGGQGVNTTDSAVRA 242

Query: 253 THIP---TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
            + P     +VV CQ  RSQ KN+ +A  +LRA+L E E   RE  A        ++G G
Sbjct: 243 VYRPGTPDEIVVVCQDGRSQIKNREKALVVLRARLAERERAVRE--AQERADRAAQVGSG 300

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTS--PSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   V D R + +  +     V+ G L   + A + +++
Sbjct: 301 DRSEKIRTYNY-PQNRVTDHRLSGDVKNFPLETVVAGGLAPLIAALVNVER 350


>gi|262201848|ref|YP_003273056.1| peptide chain release factor 1 [Gordonia bronchialis DSM 43247]
 gi|262085195|gb|ACY21163.1| peptide chain release factor 1 [Gordonia bronchialis DSM 43247]
          Length = 364

 Score =  188 bits (478), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 109/346 (31%), Positives = 172/346 (49%), Gaps = 9/346 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ +   + L  +  DP L  +   A+ + +    L   ++    +     D     EL
Sbjct: 15  IDDILAEHAGLEQQLSDPALHDDPAAARRVGKRFAELAPVMATHARLVAARDDLAAAREL 74

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A ++   +      ++                     D +D  LE+ +GAGG ES  +A 
Sbjct: 75  AADDPAFAEEIPALESTVAELDATLTDLL--APRDPHDGDDVVLEIKSGAGGEESALFAA 132

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-----GPNAYGWLKGEQGVHRL 190
            L RMY ++ E+  +K + L + + +  G K ATL IK         +  LK E GVHR+
Sbjct: 133 DLARMYLKYCERHGWKAQVLGVTESDLGGYKEATLSIKAKEAVREGVWSRLKFEGGVHRV 192

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + +YP  ++  ++ I ESD RID YR+SG GGQ VNTTDSAV
Sbjct: 193 QRVPVTESQGRIHTSAAGVLIYPEPEELEQVAIDESDLRIDVYRSSGKGGQGVNTTDSAV 252

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG+VV CQ ERSQ +NKA+A  +L A+L     ++ +  A  G +++   +   
Sbjct: 253 RITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQAAAEEEAQAAAAQGRAAQIRTVDRS 312

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   + D R   +  +   VL G++D  + A +A  +
Sbjct: 313 ERIRTYNF-PENRIADHRIGYKANNLDAVLGGEMDGLLDALVAADR 357


>gi|222100202|ref|YP_002534770.1| Peptide chain release factor 1 [Thermotoga neapolitana DSM 4359]
 gi|221572592|gb|ACM23404.1| Peptide chain release factor 1 [Thermotoga neapolitana DSM 4359]
          Length = 349

 Score =  188 bits (478), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 113/316 (35%), Positives = 170/316 (53%), Gaps = 16/316 (5%)

Query: 39  VIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLE 98
             E K    E   L+   S +  I++              E      ++  +  +  K  
Sbjct: 26  PEEMKNYGIEYAKLEEIESVVNRIRETQ---------EFIELLKEEEEDEQEIDRYEKEL 76

Query: 99  VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
               Q   LL      + A +E+  G GG E+  +A  L RMYTR+AE++ +  E  E+H
Sbjct: 77  DSLFQELFLLLSPETGDKAIVEIRPGTGGEEAALFARDLFRMYTRYAERKGWDVEIAEMH 136

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           + +  G+K A   +KG NAY  LK E GVHR+ R+   +S  R HTS +++ V P +++ 
Sbjct: 137 ETDLGGVKEAVFFVKGKNAYSILKYESGVHRVQRVPITESGGRIHTSTATVVVLPEIEER 196

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
               I   D +I+T+RASG GGQ+VN T+SAVRITHIPTG+VV CQ ERSQ++NK  A  
Sbjct: 197 DIE-IRPEDLKIETFRASGHGGQYVNKTESAVRITHIPTGIVVSCQNERSQYQNKQTALR 255

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSP 335
           +LRA+LY+L+ ++ E+   + +  K++IG G +   IR+Y   P   V D R N      
Sbjct: 256 ILRARLYQLQREQLEKE--LSQKRKSQIGTGERSEKIRTYNF-PQNRVTDHRINYTSYRL 312

Query: 336 SDVLDGDLDDFMKATL 351
            ++LDGDLD+ +   +
Sbjct: 313 QEILDGDLDEIIAKLI 328


>gi|281205221|gb|EFA79414.1| class I peptide chain release factor [Polysphondylium pallidum
           PN500]
          Length = 434

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 141/361 (39%), Positives = 218/361 (60%), Gaps = 10/361 (2%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ----NVIEAKMLMRERQHLDNAIS 57
           ++ R ++ L G   + +  QRL  +  + +   +      +  +A+ L +E Q L   I 
Sbjct: 76  EVRRIISLLVGGKHYQDKKQRLVLIENELKSNGVESQLSIDNKKAQTL-KECQRLKRDIE 134

Query: 58  FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA 117
            I+E+Q        +   A +++D S+L E S+ +  +  +    +F+S++SGE D  D 
Sbjct: 135 QIEELQSNFMYYEEISGEAKKKNDQSMLSEMSECISDLYQQSTDLEFKSIMSGENDHEDC 194

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
           YLE+HAGAGG +S DW+ +L  MY +W++++ FK   ++I  GE  G K A L I+G  A
Sbjct: 195 YLEIHAGAGGADSMDWSEILSNMYRKWSQRKDFKVTLVDISPGEV-GYKRAILKIEGEFA 253

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
           YGW + E GVH+L+R+SP+DS+ +RHTSF+S+  YP VDDSI I++   D  I+T R+SG
Sbjct: 254 YGWCRSESGVHKLIRLSPFDSSGKRHTSFASVLAYPAVDDSISIDLQTKDLLIETMRSSG 313

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQH N T+SAVRITH PTG+ V    +RSQH+NK+ A ++L+AK+   E++KR +   
Sbjct: 314 PGGQHSNKTESAVRITHTPTGISVAVSDQRSQHQNKSIAMDLLKAKIMASEIKKRAQQEE 373

Query: 298 IGESSKTEIGW-GRQI-RSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
              S     GW   +I R+Y + P   VKD RTN+E  +  ++L+G  +LD F+K  L+ 
Sbjct: 374 SFRSDLGVNGWASDRIVRTYTMHPQTRVKDQRTNLESLNIDEILEGGDELDIFIKTALSQ 433

Query: 354 K 354
           K
Sbjct: 434 K 434


>gi|13357561|ref|NP_077833.1| peptide chain release factor 1 [Ureaplasma parvum serovar 3 str.
           ATCC 700970]
 gi|170762199|ref|YP_001752083.1| peptide chain release factor 1 [Ureaplasma parvum serovar 3 str.
           ATCC 27815]
 gi|171920085|ref|ZP_02690833.2| peptide chain release factor 1 [Ureaplasma parvum serovar 1 str.
           ATCC 27813]
 gi|183508605|ref|ZP_02689678.2| peptide chain release factor 1 [Ureaplasma parvum serovar 14 str.
           ATCC 33697]
 gi|186701604|ref|ZP_02553446.2| peptide chain release factor 1 [Ureaplasma parvum serovar 6 str.
           ATCC 27818]
 gi|13124459|sp|Q9PRE0|RF1_UREPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039997|sp|B1AHY9|RF1_UREP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|11277784|pir||D82945 translation releasing factor RF-1 UU003 [imported] - Ureaplasma
           urealyticum
 gi|6898949|gb|AAF30410.1|AE002100_3 peptide chain release factor 1 [Ureaplasma parvum serovar 3 str.
           ATCC 700970]
 gi|168827776|gb|ACA33038.1| peptide chain release factor 1 [Ureaplasma parvum serovar 3 str.
           ATCC 27815]
 gi|171902439|gb|EDT48728.1| peptide chain release factor 1 [Ureaplasma parvum serovar 1 str.
           ATCC 27813]
 gi|182676062|gb|EDT87967.1| peptide chain release factor 1 [Ureaplasma parvum serovar 14 str.
           ATCC 33697]
 gi|186700834|gb|EDU19116.1| peptide chain release factor 1 [Ureaplasma parvum serovar 6 str.
           ATCC 27818]
          Length = 359

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 103/362 (28%), Positives = 175/362 (48%), Gaps = 19/362 (5%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           M+ +++L         +    +   L  + E   +  +  + K +  + +          
Sbjct: 1   MEYNKKLYEA-----IERVAIKNDALKKELE--TVVTDFKKIKEINIQLKKTTKIAEAFA 53

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSND 116
           + + +L   +   ++   E D  +++    +L   K+ +   +       L +   D  +
Sbjct: 54  KYKQKLDTGIAAEKILNTEKDLELIELAQMDLDEAKINIPIIENDLKIMLLPTDPNDDKN 113

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             +E+   AGG ES  +   L   Y  +AE   +K + +E+      G    + +I G  
Sbjct: 114 VIVEMRPAAGGDESSIFVGNLFDTYRAYAENNNWKMKIIEMTPNAV-GFSFISFMISGEE 172

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
            Y  +K E GVHR+ R+   +S  R HTS  ++ V P   D +++ I+ ++ RIDTYRAS
Sbjct: 173 VYSRMKFESGVHRVQRVPATESKGRVHTSTITVAVLP-EQDEVDVVINPTELRIDTYRAS 231

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQHVN T+SAVRITHIPTGVV  CQ+ +SQ +N+  A  MLRAKL+E   +++    
Sbjct: 232 GAGGQHVNRTESAVRITHIPTGVVAACQEGKSQIENRETAMKMLRAKLWEAAQEQQNAEF 291

Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
                 K ++G G    +IR+Y   P   V D R N+       ++ G+LD+ + A +A 
Sbjct: 292 ANL--RKNQVGTGDRSEKIRTYNY-PQNRVTDHRINLTLNKLDQIMMGELDEIIDALIAD 348

Query: 354 KK 355
           ++
Sbjct: 349 EQ 350


>gi|301629497|ref|XP_002943876.1| PREDICTED: peptide chain release factor 1-like [Xenopus (Silurana)
           tropicalis]
          Length = 460

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 98/258 (37%), Positives = 146/258 (56%), Gaps = 6/258 (2%)

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
              Q   L     D+ +A+LE+ AG GG ES  +A  L R+YTR+A    ++ E +  ++
Sbjct: 194 NELQRLLLPKDPDDARNAFLEIRAGTGGDESALFAGDLARVYTRYAATVGWRVEIMSANE 253

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
            E  G K   L I+G + YG L+ E G HR+ R+   ++  R HTS  ++ V P  D+  
Sbjct: 254 SELGGYKEVVLRIEGDHVYGALRFESGGHRVQRVPATETQGRIHTSACTVAVMPEPDEQQ 313

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
            I ++ +D RIDT+RASGAGGQH+N TDSAVR+ HIPTG+V +CQ  RSQH NKA+A  +
Sbjct: 314 AIMLNPADLRIDTFRASGAGGQHINKTDSAVRVVHIPTGIVAECQDGRSQHSNKAKALQV 373

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPS 336
           L+A++ + E  +R   A      +  IG G    +IR+Y   P     D R N+      
Sbjct: 374 LQARIQDKERSER--AAKEAAVRRGLIGSGDRSDRIRTYNF-PQGRFTDHRINLTLYKLL 430

Query: 337 DVLDGDLDDFMKATLAIK 354
            +++GDL + ++A    +
Sbjct: 431 AIMEGDLGEVLQALQHAR 448


>gi|224003217|ref|XP_002291280.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220973056|gb|EED91387.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 343

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 125/343 (36%), Positives = 188/343 (54%), Gaps = 20/343 (5%)

Query: 19  AVQRLSFLNTKTEDPHLWQ--NVIEAKMLMRE---RQHLDNAISFIKEIQ-------DRL 66
              RL  L T+T  P  W   N   ++++ RE      L   +   + ++       + L
Sbjct: 1   IQSRLQDLETETSSPSFWDASNSDRSEVVTREIGRYTRLKGEMEGWERLRGDALGALELL 60

Query: 67  CDNLI------LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            D L         E   +E      +E   + Q++  + +  + ++LLSG  DS    L+
Sbjct: 61  QDLLDGSSGGDNFEEDEDEMILLTFEECQSSAQKLLEQSQKYELQTLLSGPYDSAQCTLQ 120

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + AGAGGTE+ DW +ML RMY R A+   +K   LE   G+  G KS  LL++G NAYGW
Sbjct: 121 LTAGAGGTEACDWVSMLYRMYMRHAQFMDYKVTVLEESVGDVVGYKSVELLVEGVNAYGW 180

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP--VVDDSIEIEISESDCRIDTYRASGA 238
            KGE+G HRLVR+SP+++N++R T+F+ + V P        EI+I E +  I T R+ G 
Sbjct: 181 FKGEKGAHRLVRLSPFNANNKRQTTFAGVDVIPLLEEGTVSEIDIPEKELEITTMRSGGK 240

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ+VN  ++ VR+ HIP+G+ ++C QERSQ +NK  A   L+ +L  +  +++ +  N 
Sbjct: 241 GGQNVNKVETGVRVKHIPSGIAIKCTQERSQSQNKQIALTRLKGQLLVIAQEQQLQSINA 300

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
                 E  WG QIR+YV+QPY+MVKD R+  E +    VLDG
Sbjct: 301 IRGDIVEASWGAQIRNYVMQPYKMVKDARSGWETSDVEGVLDG 343


>gi|226492409|ref|NP_001142228.1| hypothetical protein LOC100274396 [Zea mays]
 gi|194707706|gb|ACF87937.1| unknown [Zea mays]
          Length = 416

 Score =  188 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 124/345 (35%), Positives = 187/345 (54%), Gaps = 15/345 (4%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             QR ++L  +   P    +  E     +E + L++ +  IK+++ +  +   L  L   
Sbjct: 68  IEQRSAYLQEQINQPA--ASPEEYSRANKEFRKLESTMELIKDLRSKQEEIEGLKSLVAN 125

Query: 79  EDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           + +   ++E ++    +     K          L   EAD  D  LEV AG GG E+  +
Sbjct: 126 DHEEKDMREMAEEELLVAVEEEKRLQHELFRSLLPKDEADEKDCILEVRAGTGGEEASLF 185

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  + RMY ++A+K  +K + ++I +    G K A+  I GP A+G LK E G+HR+ R+
Sbjct: 186 AMDIFRMYEKYAQKNGWKFDVIDIMESAVKGYKEASGTISGPGAFGKLKFESGIHRVQRV 245

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              + + R HTS  S+ V P   D +++++   D RIDTYR+ G+GGQ VNTTDSAVRIT
Sbjct: 246 PATEKSGRMHTSAVSVAVLPQ-ADEVDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRIT 304

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           HIPTG VV  Q ERSQH NKA+A  +LRA+LYELE ++     +   S   +IG G    
Sbjct: 305 HIPTGTVVAIQDERSQHMNKAKALKVLRARLYELERRRLHMDRSKLRSE--QIGSGDRSE 362

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354
           +IR+Y   P   V D R  +   S +DV++G+ LD F+ A L  +
Sbjct: 363 RIRTYNF-PQGRVTDHRVGVTHHSIADVMEGESLDMFVDALLLQE 406


>gi|71893491|ref|YP_278937.1| peptide chain release factor 1 [Mycoplasma hyopneumoniae J]
 gi|119361562|sp|Q4AAJ5|RF1_MYCHJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71851618|gb|AAZ44226.1| peptide chain release factor RF-1 [Mycoplasma hyopneumoniae J]
          Length = 361

 Score =  188 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 112/350 (32%), Positives = 173/350 (49%), Gaps = 7/350 (2%)

Query: 11  GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
             +F+      Q+   L    E   +  +  +   + +E   +   I   ++  D     
Sbjct: 3   KKMFNSLMKIHQKYQDLKQLLETDQILNDQKQYLQIAKEIASISEIIEVFQKFLDDQKVL 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGA 125
                + ++EDD  ++Q     +  +   +E  +       L   + D  D  +E+   A
Sbjct: 63  EDAKTILIQEDDPELIQLAKVEIATMSKNIEEYEKKLLILMLPKDKNDEKDVIVEIRGAA 122

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +   L +MY +WA+ +K K + L        G       I G   Y  LK E 
Sbjct: 123 GGDEANIFVGDLFKMYHKWADSQKAKVKVLSSSLALAGGFSQIIFQISGQKIYSKLKFES 182

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   ++  R HTS +++ V P +D+ IEIEI+ SD +IDTYR+SGAGGQ VNT
Sbjct: 183 GVHRVQRVPATETMGRIHTSTATVTVMPKIDEKIEIEINPSDLKIDTYRSSGAGGQSVNT 242

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITHIPTG+VV  Q ERSQ  NK  A  +L++K+Y LELQK+++  +        
Sbjct: 243 TDSAVRITHIPTGIVVTSQDERSQIGNKEIAMGILKSKIYNLELQKQQQKQSDFRKLAGS 302

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                +IR+Y   P   + D R N   +    ++ G L+  ++A LA +K
Sbjct: 303 GARSEKIRTYNY-PQDRLTDHRINFSTS-LKPIIQGSLNPIIEALLAQEK 350


>gi|317506166|ref|ZP_07963987.1| peptide chain release factor 1 protein [Segniliparus rugosus ATCC
           BAA-974]
 gi|316255511|gb|EFV14760.1| peptide chain release factor 1 protein [Segniliparus rugosus ATCC
           BAA-974]
          Length = 354

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 123/346 (35%), Positives = 176/346 (50%), Gaps = 15/346 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +     L  +  DP L ++V  AK + +    L        + ++    +L     
Sbjct: 5   LDELIAEYESLQERWADPSLQEDVAAAKKVGKRVAELAPIYEAHAQ-REAAQADLAAAHE 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
             E D     +E      RI    E            D  D  LEV AGAGG ES  +A 
Sbjct: 64  LAELDPEFAKEEVERLTGRISELDEELDELLAPRDPHDGEDVVLEVKAGAGGEESALFAG 123

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG--------PNAYGWLKGEQGV 187
            L+RMYT++AE+R+++ E L I + +  G+K AT+ IK            + WLK E GV
Sbjct: 124 DLIRMYTKFAERRRWRVEVLSIAESDLGGVKDATISIKRTGGDQSPAQGVWAWLKHEGGV 183

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS + +  YP  +D+ E+ I ES+ RID YR+SG GGQ VNTTD
Sbjct: 184 HRVQRVPATESQGRIHTSAAGVLAYPEPEDAPEVVIDESELRIDVYRSSGKGGQGVNTTD 243

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI- 306
           SAVRITH+PTG+VV CQ ERSQ +NKA+A  +L A+L +L  +K    A+     K +I 
Sbjct: 244 SAVRITHLPTGLVVTCQNERSQLQNKARAMVVLAARLEQLREEK--AAADAASGRKEQIR 301

Query: 307 --GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
                 +IR+Y   P   + D R   + ++   VL+GDL+  +   
Sbjct: 302 TVDRSERIRTYNF-PENRIADHRIGYKASNLDMVLEGDLEPMLSEL 346


>gi|72080478|ref|YP_287536.1| peptide chain release factor 1 [Mycoplasma hyopneumoniae 7448]
 gi|119361561|sp|Q4A8M6|RF1_MYCH7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71913602|gb|AAZ53513.1| peptide chain release factor RF-1 [Mycoplasma hyopneumoniae 7448]
          Length = 361

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 112/350 (32%), Positives = 173/350 (49%), Gaps = 7/350 (2%)

Query: 11  GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
             +F+      Q+   L    E   +  +  +   + +E   +   I   ++  D     
Sbjct: 3   KKMFNSLMKIHQKYQDLKQLLETDQILNDQKQYLQIAKEIASITEIIEVFQKFLDDQKVL 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGA 125
                + ++EDD  ++Q     +  +   +E  +       L   + D  D  +E+   A
Sbjct: 63  EDAKTILIQEDDPELIQLAKVEIATMSKNIEEYEKKLLILMLPKDKNDEKDVIVEIRGAA 122

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +   L +MY +WA+ +K K + L        G       I G   Y  LK E 
Sbjct: 123 GGDEANIFVGDLFKMYHKWADSQKAKVKVLSSSLALAGGFSQIIFQISGQKIYSKLKFES 182

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   ++  R HTS +++ V P +D+ IEIEI+ SD +IDTYR+SGAGGQ VNT
Sbjct: 183 GVHRVQRVPATETMGRIHTSTATVTVMPKIDEKIEIEINPSDLKIDTYRSSGAGGQSVNT 242

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITHIPTG+VV  Q ERSQ  NK  A  +L++K+Y LELQK+++  +        
Sbjct: 243 TDSAVRITHIPTGIVVTSQDERSQIGNKEIAMGILKSKIYNLELQKQQQKQSDFRKLAGS 302

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
                +IR+Y   P   + D R N   +    ++ G L+  ++A LA +K
Sbjct: 303 GARSEKIRTYNY-PQDRLTDHRINFSTS-LKPIIQGSLNPIIEALLAQEK 350


>gi|195973766|gb|ACG63448.1| peptide chain release factor 2 [Francisella philomiragia]
          Length = 294

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 154/296 (52%), Positives = 207/296 (69%), Gaps = 3/296 (1%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L R++  L+N +   + I + L    +   L L E+D S++QE 
Sbjct: 2   ELEDGSIWNNPEYAQNLGRQKVELENVVHNCEYISETLE--TLTELLELAEEDESLMQEI 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           + + Q +  E+E  +F  + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 60  AKDTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK    ++ DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +K
Sbjct: 240 QHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIK 294


>gi|65317305|ref|ZP_00390264.1| COG0216: Protein chain release factor A [Bacillus anthracis str.
           A2012]
          Length = 323

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 110/317 (34%), Positives = 169/317 (53%), Gaps = 11/317 (3%)

Query: 46  MRERQHLDNAISFIKEIQD---RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           ++    +   +   +E +D    L D   +LE  L+ +   +++E    L+  +  +  +
Sbjct: 3   IQRNXDIQETVEVYREYKDVREXLKDAKAMLEDKLDAEMREMVKEEVSELESQEKTLSER 62

Query: 103 -QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
            +   +     D  +  +EV   AGG E+  +A  L RMY+R+AE + +KTE +E    E
Sbjct: 63  LKILLVPKDPNDDKNVIVEVRGAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTE 122

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
             G K    +I G  A+  LK E G HR+ R+   +S  R HTS +++ V P   + +EI
Sbjct: 123 LGGYKEIIFMINGKGAFAKLKFENGAHRVQRVPETESGGRIHTSTATVAVLP-EAEEVEI 181

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           +I E D R+DT+ +SG GGQ VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LR
Sbjct: 182 DIHEKDVRVDTFASSGPGGQSVNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLR 241

Query: 282 AKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           A++Y+   Q  E  A   ++ K  +G G    +IR+Y   P   V D R  +       +
Sbjct: 242 ARVYDKFRQ--EAQAEYDQNRKQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQI 298

Query: 339 LDGDLDDFMKATLAIKK 355
           L G LDDF+ A +   +
Sbjct: 299 LQGKLDDFINALVMEDQ 315


>gi|315080405|gb|EFT52381.1| peptide chain release factor 1 [Propionibacterium acnes HL078PA1]
          Length = 361

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 109/343 (31%), Positives = 166/343 (48%), Gaps = 8/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  + T+  D  +  +      L +    L + +S    +     D     +L
Sbjct: 9   IDEVRRRLREIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D +   E      ++ L           S   D  DA +E+H+G GG ES  +A 
Sbjct: 69  TE--EDPAFGLEAERLRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 126

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192
            LLRMYTR+AE+  +    L     +  G ++  + +        YG+LK E GVHR+ R
Sbjct: 127 DLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPVYGYLKHEGGVHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S+ R HTS   + V P VD++    I  ++ R+D YR+SG GGQ VNTTDSAVR+
Sbjct: 187 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPAEVRVDVYRSSGPGGQGVNTTDSAVRL 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311
           TH+PTG+V  CQ ERSQ +NKA+A  MLRAK+  L  Q+  +  +     +   +    +
Sbjct: 246 THLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +R+Y   P   + D R   +      +L GDL D + A  A +
Sbjct: 306 VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 347


>gi|195973762|gb|ACG63446.1| peptide chain release factor 2 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|195973768|gb|ACG63449.1| peptide chain release factor 2 [Francisella philomiragia]
          Length = 294

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 153/296 (51%), Positives = 207/296 (69%), Gaps = 3/296 (1%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L R++  L+N +   + I + L    +   L L E+D S++QE 
Sbjct: 2   ELEDGSIWDNPEYAQNLGRQKVELENVVHNCEYISETLE--TLTELLELAEEDESLMQEI 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           + + Q +  E+E  +F  + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 60  AKDTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK    ++ DG+ AGIK  TL ++G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKVEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +K
Sbjct: 240 QHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIK 294


>gi|50842731|ref|YP_055958.1| peptide chain release factor 1 [Propionibacterium acnes KPA171202]
 gi|289425142|ref|ZP_06426919.1| peptide chain release factor 1 [Propionibacterium acnes SK187]
 gi|295130812|ref|YP_003581475.1| peptide chain release factor 1 [Propionibacterium acnes SK137]
 gi|50840333|gb|AAT83000.1| peptide chain release factor 1 [Propionibacterium acnes KPA171202]
 gi|289154120|gb|EFD02808.1| peptide chain release factor 1 [Propionibacterium acnes SK187]
 gi|291375831|gb|ADD99685.1| peptide chain release factor 1 [Propionibacterium acnes SK137]
 gi|313764216|gb|EFS35580.1| peptide chain release factor 1 [Propionibacterium acnes HL013PA1]
 gi|313772062|gb|EFS38028.1| peptide chain release factor 1 [Propionibacterium acnes HL074PA1]
 gi|313791908|gb|EFS40009.1| peptide chain release factor 1 [Propionibacterium acnes HL110PA1]
 gi|313810262|gb|EFS47983.1| peptide chain release factor 1 [Propionibacterium acnes HL083PA1]
 gi|313812711|gb|EFS50425.1| peptide chain release factor 1 [Propionibacterium acnes HL025PA1]
 gi|313816309|gb|EFS54023.1| peptide chain release factor 1 [Propionibacterium acnes HL059PA1]
 gi|313818790|gb|EFS56504.1| peptide chain release factor 1 [Propionibacterium acnes HL046PA2]
 gi|313820562|gb|EFS58276.1| peptide chain release factor 1 [Propionibacterium acnes HL036PA1]
 gi|313822633|gb|EFS60347.1| peptide chain release factor 1 [Propionibacterium acnes HL036PA2]
 gi|313827397|gb|EFS65111.1| peptide chain release factor 1 [Propionibacterium acnes HL063PA2]
 gi|313830592|gb|EFS68306.1| peptide chain release factor 1 [Propionibacterium acnes HL007PA1]
 gi|313833628|gb|EFS71342.1| peptide chain release factor 1 [Propionibacterium acnes HL056PA1]
 gi|313838323|gb|EFS76037.1| peptide chain release factor 1 [Propionibacterium acnes HL086PA1]
 gi|314915694|gb|EFS79525.1| peptide chain release factor 1 [Propionibacterium acnes HL005PA4]
 gi|314917937|gb|EFS81768.1| peptide chain release factor 1 [Propionibacterium acnes HL050PA1]
 gi|314920320|gb|EFS84151.1| peptide chain release factor 1 [Propionibacterium acnes HL050PA3]
 gi|314924927|gb|EFS88758.1| peptide chain release factor 1 [Propionibacterium acnes HL036PA3]
 gi|314931540|gb|EFS95371.1| peptide chain release factor 1 [Propionibacterium acnes HL067PA1]
 gi|314957925|gb|EFT02028.1| peptide chain release factor 1 [Propionibacterium acnes HL002PA1]
 gi|314960548|gb|EFT04650.1| peptide chain release factor 1 [Propionibacterium acnes HL002PA2]
 gi|314962564|gb|EFT06664.1| peptide chain release factor 1 [Propionibacterium acnes HL082PA1]
 gi|314967573|gb|EFT11672.1| peptide chain release factor 1 [Propionibacterium acnes HL037PA1]
 gi|314973593|gb|EFT17689.1| peptide chain release factor 1 [Propionibacterium acnes HL053PA1]
 gi|314975815|gb|EFT19910.1| peptide chain release factor 1 [Propionibacterium acnes HL045PA1]
 gi|314983706|gb|EFT27798.1| peptide chain release factor 1 [Propionibacterium acnes HL005PA1]
 gi|314987887|gb|EFT31978.1| peptide chain release factor 1 [Propionibacterium acnes HL005PA2]
 gi|314989698|gb|EFT33789.1| peptide chain release factor 1 [Propionibacterium acnes HL005PA3]
 gi|315084734|gb|EFT56710.1| peptide chain release factor 1 [Propionibacterium acnes HL027PA2]
 gi|315085418|gb|EFT57394.1| peptide chain release factor 1 [Propionibacterium acnes HL002PA3]
 gi|315095866|gb|EFT67842.1| peptide chain release factor 1 [Propionibacterium acnes HL038PA1]
 gi|315098771|gb|EFT70747.1| peptide chain release factor 1 [Propionibacterium acnes HL059PA2]
 gi|315101459|gb|EFT73435.1| peptide chain release factor 1 [Propionibacterium acnes HL046PA1]
 gi|315105832|gb|EFT77808.1| peptide chain release factor 1 [Propionibacterium acnes HL030PA1]
 gi|315108751|gb|EFT80727.1| peptide chain release factor 1 [Propionibacterium acnes HL030PA2]
 gi|327326418|gb|EGE68208.1| peptide chain release factor 1 [Propionibacterium acnes HL096PA2]
 gi|327329874|gb|EGE71628.1| peptide chain release factor 1 [Propionibacterium acnes HL097PA1]
 gi|327445686|gb|EGE92340.1| peptide chain release factor 1 [Propionibacterium acnes HL043PA2]
 gi|327448330|gb|EGE94984.1| peptide chain release factor 1 [Propionibacterium acnes HL043PA1]
 gi|327450545|gb|EGE97199.1| peptide chain release factor 1 [Propionibacterium acnes HL087PA3]
 gi|327453373|gb|EGF00028.1| peptide chain release factor 1 [Propionibacterium acnes HL092PA1]
 gi|328753199|gb|EGF66815.1| peptide chain release factor 1 [Propionibacterium acnes HL025PA2]
 gi|328753962|gb|EGF67578.1| peptide chain release factor 1 [Propionibacterium acnes HL087PA1]
 gi|328754695|gb|EGF68311.1| peptide chain release factor 1 [Propionibacterium acnes HL020PA1]
 gi|328760891|gb|EGF74456.1| peptide chain release factor 1 [Propionibacterium acnes HL099PA1]
          Length = 361

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 110/343 (32%), Positives = 167/343 (48%), Gaps = 8/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  + T+  D  +  +      L +    L + +S    +     D     +L
Sbjct: 9   IDEVRRRLREIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D +   E      ++ L           S   D  DA +E+H+G GG ES  +A 
Sbjct: 69  TE--EDPAFGLEAERLRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 126

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192
            LLRMYTR+AE+  +    L     +  G ++  + +       AYG+LK E GVHR+ R
Sbjct: 127 DLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGGVHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S+ R HTS   + V P VD++    I  ++ R+D YR+SG GGQ VNTTDSAVR+
Sbjct: 187 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPAEVRVDVYRSSGPGGQGVNTTDSAVRL 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311
           TH+PTG+V  CQ ERSQ +NKA+A  MLRAK+  L  Q+  +  +     +   +    +
Sbjct: 246 THLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +R+Y   P   + D R   +      +L GDL D + A  A +
Sbjct: 306 VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 347


>gi|308805082|ref|XP_003079853.1| COG0216: Protein chain release factor A (ISS) [Ostreococcus tauri]
 gi|116058310|emb|CAL53499.1| COG0216: Protein chain release factor A (ISS) [Ostreococcus tauri]
          Length = 1134

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 116/343 (33%), Positives = 177/343 (51%), Gaps = 15/343 (4%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           + A +R   L      P     +       +E   LD  +     ++    +   L ELA
Sbjct: 549 EAATKRHDELIALISAPDAA--IDRVIEANKELARLDPLVKQYSMVKSLRDERESLDELA 606

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQD 132
              D+  I +   + L+ I  ++  ++       L   +AD   A LEV AGAGG E+  
Sbjct: 607 RTSDEKDITELAREELRAIDAKLPEQEHALRIMLLPRDDADDRGAILEVRAGAGGDEAAL 666

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY   A K  ++ E L + + +  GI+  +  + G   +G LK E GVHR+ R
Sbjct: 667 FAAELFRMYALHARKSGWRFETLNMSETDGKGIREGSAEVLGDGVFGRLKFESGVHRVQR 726

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS +S+ V P   + ++++I + D RI+T RASGAGGQHVNTT+SAVR+
Sbjct: 727 VPETETQGRVHTSTASVAVLPHAAE-VDMDIRDEDVRIETMRASGAGGQHVNTTNSAVRL 785

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+ V  Q ERSQHKNKA+A+++L+++LY++E +K         S  + IG G   
Sbjct: 786 THLPTGITVAIQDERSQHKNKAKAFSVLKSRLYDMEREKLANERAELRS--SLIGTGDRS 843

Query: 310 RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGD-LDDFMKAT 350
            ++R+Y   P   VKD R            +DG  LDD +   
Sbjct: 844 EKVRTYNF-PQGRVKDHRVDGNVSGDIKGFMDGFLLDDLVDKL 885


>gi|256370731|ref|YP_003108556.1| peptide chain release factor 2 [Candidatus Sulcia muelleri SMDSEM]
 gi|256009523|gb|ACU52883.1| peptide chain release factor 2 [Candidatus Sulcia muelleri SMDSEM]
          Length = 360

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 117/343 (34%), Positives = 199/343 (58%), Gaps = 5/343 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KLS ++  +    +    +  L     K   P  W+N  ++K +++        ++    
Sbjct: 9   KLSNKIKEISISLEIKKKISFLKKEEKKLMSPFFWKNKKQSKKIIKSLSETKKWLNTFNL 68

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +++   D  IL       ++  +          I+  +   + ++    + D+++A L++
Sbjct: 69  LKESFNDLKILFFYFKSGEETELEINNLLKK--IENLISKIELKNFFFEKEDASNAVLQI 126

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGTES DW +ML RMY  WAEK  FK + L    G+  G KS T  +KG   +G+L
Sbjct: 127 SAGAGGTESCDWVSMLYRMYFLWAEKNNFKIKKLNSLQGDIIGFKSITFEVKGFYPFGYL 186

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE GVHRLVRISP+D++ R HTSF+S+++YP++   + ++I  SD   DT+R+ GAGGQ
Sbjct: 187 KGENGVHRLVRISPFDNSKR-HTSFASVYIYPLIKKDLNLDIKASDITWDTFRSGGAGGQ 245

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++ VR+ H PT ++++  + RSQ +NK +A  +L+++LY +E QK     +  + 
Sbjct: 246 NVNKVETGVRLHHRPTNIIIENSETRSQIQNKNKALKLLKSRLYYIEKQKL--FKSKMKF 303

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           +K +I WG QIR+Y++ PY++VKD++T  E +    VL+G+++
Sbjct: 304 NKKKIEWGSQIRNYIMHPYKLVKDIKTGYETSDIHSVLNGEIN 346


>gi|195973770|gb|ACG63450.1| peptide chain release factor 2 [Francisella philomiragia]
          Length = 294

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 154/296 (52%), Positives = 207/296 (69%), Gaps = 3/296 (1%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L R++  L+N +   + I + L    +   L L E+D S++QE 
Sbjct: 2   ELEDGSIWDNPEYAQNLGRQKVELENVVHNCEYISETLE--TLTELLELAEEDESLMQEI 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           + + Q +  E+E  +F  + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 60  AKDTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK    ++ DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +K
Sbjct: 240 QHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIK 294


>gi|195973774|gb|ACG63452.1| peptide chain release factor 2 [Francisella noatunensis]
 gi|198417115|gb|ACH87844.1| PrfB [Francisella noatunensis subsp. noatunensis]
          Length = 294

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 153/296 (51%), Positives = 207/296 (69%), Gaps = 3/296 (1%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L R++  L+N +   + I + L    +   L L E+D S++QE 
Sbjct: 2   ELEDGSIWDNPEYAQNLGRQKVELENIVHNCEHISETLE--TLTELLELAEEDESLMQEI 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           + + Q +  E+E  +F  + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 60  AKDTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK    ++ DG+ AGIK  TL I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQH+N TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHINKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +K
Sbjct: 240 QHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIK 294


>gi|171920548|ref|ZP_02695589.3| peptide chain release factor 1 [Ureaplasma urealyticum serovar 13
           str. ATCC 33698]
 gi|185178800|ref|ZP_02554523.2| peptide chain release factor 1 [Ureaplasma urealyticum serovar 5
           str. ATCC 27817]
 gi|188024350|ref|ZP_02570606.2| peptide chain release factor 1 [Ureaplasma urealyticum serovar 7
           str. ATCC 27819]
 gi|188518435|ref|ZP_02556548.2| peptide chain release factor 1 [Ureaplasma urealyticum serovar 11
           str. ATCC 33695]
 gi|188524208|ref|ZP_02557610.2| peptide chain release factor 1 [Ureaplasma urealyticum serovar 12
           str. ATCC 33696]
 gi|195867475|ref|ZP_03079479.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 9
           str. ATCC 33175]
 gi|198273256|ref|ZP_03205792.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 4
           str. ATCC 27816]
 gi|225550782|ref|ZP_03771731.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 2
           str. ATCC 27814]
 gi|225551438|ref|ZP_03772384.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 8
           str. ATCC 27618]
 gi|171903245|gb|EDT49534.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 13
           str. ATCC 33698]
 gi|184209423|gb|EDU06466.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 5
           str. ATCC 27817]
 gi|188018616|gb|EDU56656.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 7
           str. ATCC 27819]
 gi|188998234|gb|EDU67331.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 11
           str. ATCC 33695]
 gi|195660120|gb|EDX53500.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 12
           str. ATCC 33696]
 gi|195660951|gb|EDX54204.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 9
           str. ATCC 33175]
 gi|198249776|gb|EDY74556.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 4
           str. ATCC 27816]
 gi|225379253|gb|EEH01618.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 8
           str. ATCC 27618]
 gi|225379936|gb|EEH02298.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 2
           str. ATCC 27814]
          Length = 359

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 104/362 (28%), Positives = 174/362 (48%), Gaps = 19/362 (5%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           M+ +++L         +    +   L  + E   +  +  + K +  + +          
Sbjct: 1   MEYNKKLYEA-----IERVAVKNKTLKQELE--TITSDFKKIKEINIQLKKTTKIAEAFA 53

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSND 116
           + + ++   ++  EL   E D  +++    +L   K  +   +       L +   D  +
Sbjct: 54  KYKQKIDAGIVAEELLNTEKDLELVELAQMDLDDAKASIPVIENELKIMLLPTDPNDDKN 113

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             +E+   AGG ES  +   L   Y  + E   +K + +E+      G    + +I G  
Sbjct: 114 VIVEMRPAAGGDESSIFVGNLFDTYRAYTESNNWKMKIIEMTPNAV-GFSFISFMISGEE 172

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
            Y  +K E GVHR+ R+   +S  R HTS  ++ V P   D +++ I+ SD RIDTYRAS
Sbjct: 173 VYSRMKFESGVHRVQRVPATESKGRVHTSTITVAVLP-EQDEVDVVINPSDLRIDTYRAS 231

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQHVN T+SAVRITHIPTGVV  CQ+ +SQ +N+  A  MLRAKL+E   +++    
Sbjct: 232 GAGGQHVNRTESAVRITHIPTGVVAACQEGKSQIENRETAMKMLRAKLWEAAQEQQNAEF 291

Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
                 K ++G G    +IR+Y   P   V D R ++       ++ G+LD+ + A +A 
Sbjct: 292 ANL--RKNQVGTGDRSEKIRTYNY-PQNRVTDHRISLTLNKLDQIMMGELDEIIDALIAD 348

Query: 354 KK 355
           ++
Sbjct: 349 EQ 350


>gi|168203426|gb|ACA21561.1| protein release factor class I [Candidatus Pelagibacter ubique]
          Length = 356

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 111/344 (32%), Positives = 177/344 (51%), Gaps = 15/344 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  + +   L        +  +        +E   L+  I+  K+      D   L ++
Sbjct: 7   IEELINKHMQLEKDLSSDKI--DKKLFAEKSKEYSDLNEIIADAKKYLSFENDKTELKKI 64

Query: 76  ALEEDDC-----SILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +++           E  D   + +   +  +   L   EAD  +A +E+ AG GG E+
Sbjct: 65  LEDQNSDEELLKMAETEIKDLQIQFEKNEKKLKLFLLPRDEADKKNAIIEIRAGTGGLEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L +MY + + K+K+  E + I   E  G+K     IKG N Y  LK E GVHR+
Sbjct: 125 SLFAGDLFKMYEKVSHKKKWLVEIISISKSEAGGLKEVIASIKGTNIYSTLKYESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++++I++SD RID +RA G GGQ VNTTDSAV
Sbjct: 185 QRVPDTETQGRVHTSAATVAVLP-EAEEVDLKINDSDLRIDVFRAGGPGGQSVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG+ V  Q E+SQHKNKA+   +LRA+LYELE  + ++  +     K++IG G 
Sbjct: 244 RITHIPTGLSVSQQDEKSQHKNKAKGMKILRARLYELERTRIDQERSQ--DRKSKIGTGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
              +IR+Y   P   V D R N+      + L+G+  D+ +++ 
Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTIHKLEEFLEGEAFDEMIESL 344


>gi|195973764|gb|ACG63447.1| peptide chain release factor 2 [Francisella philomiragia]
          Length = 294

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 150/296 (50%), Positives = 200/296 (67%), Gaps = 3/296 (1%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L R++  L+N +   + I + L     LLELA E++        
Sbjct: 2   ELEDGSIWDNPEYAQNLGRQKVELENVVHNCEYISETLETLTELLELAEEDESLMQEIAK 61

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
                  ++  E  +F  + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 62  DTQEVTAEI--EKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK    ++ DG+ AGIK  TL ++G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKVEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +K
Sbjct: 240 QHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIK 294


>gi|326561958|gb|EGE12292.1| peptide chain release factor 1 [Moraxella catarrhalis 103P14B1]
          Length = 319

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 110/314 (35%), Positives = 158/314 (50%), Gaps = 7/314 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   +     DP    +  + + L  E   L    +  ++      D     EL
Sbjct: 9   LDQMVDRFEEVTALLSDPDTISDNKKFRELSMEHSDLSEITTTWQDFVQAEADLQTANEL 68

Query: 76  ALEEDDCSIL-QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   +   E       I+   E      L     D   A+LE+ AG GG E+  ++
Sbjct: 69  LSDPEMKEMALDEIEVARANIETLEERLNVMMLPKDPNDKATAFLEIRAGTGGDEAAIFS 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY ++ + + ++ E L  ++GE  G K     + G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYQKYTQSQGWQVEVLSANEGEHGGYKEIIARVSGIGVYGRLKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P V+    +EI+ SD RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 ATESQGRVHTSACTVAVMPEVEIDDTVEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           IPTGVV +CQQERSQH NK +A  ML A++ + ++Q   +I    +  +  +G G    +
Sbjct: 249 IPTGVVAECQQERSQHANKEKAMKMLVARIQQAKVQ--AQIDATSDMRRNLVGSGDRSER 306

Query: 312 IRSYVLQPYQMVKD 325
           IR+Y   P   + D
Sbjct: 307 IRTYNF-PQGRMTD 319


>gi|295111639|emb|CBL28389.1| peptide chain release factor 2 [Synergistetes bacterium SGP1]
          Length = 224

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 126/219 (57%), Positives = 161/219 (73%)

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
           MLLRMY R+AE+   K   LE  + EEAGIKSAT++++G NAYG+LK E+GVHRLVRISP
Sbjct: 1   MLLRMYLRYAERDGLKATVLEATNDEEAGIKSATVMMEGDNAYGFLKAERGVHRLVRISP 60

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           +DS  RRHTSF+S+ V P   D ++++I   D ++DTYRASGAGGQ+VN TDSA+RITH+
Sbjct: 61  FDSAHRRHTSFASVLVTPEFSDDVDVDIRPEDLKVDTYRASGAGGQYVNRTDSAIRITHL 120

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315
           PTG+VV CQ ERSQH N+  A ++LR+KLYE  LQ+R++        K E  WG QIRSY
Sbjct: 121 PTGIVVTCQNERSQHMNRQVAMHVLRSKLYERALQERQDELASVVGDKKETTWGSQIRSY 180

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           VL PY +VKD RT +EK +   VLDGD+DDF+   L  +
Sbjct: 181 VLHPYTLVKDHRTGLEKGNAQAVLDGDIDDFIMEYLRFR 219


>gi|225624841|gb|ACN96555.1| PrfB [Francisella noatunensis subsp. orientalis]
          Length = 294

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 149/296 (50%), Positives = 198/296 (66%), Gaps = 3/296 (1%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L R++  L+N +   + I + L     LLELA E++        
Sbjct: 2   ELEDGSIWDNPEYAQNLGRQKVELENVVHNCEHISETLETLTELLELAEEDESLIQEIAK 61

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
                  ++  E  +F  + SG+ D N+ +L + +G+GGTE+QDWA ML+RMY RWA+ +
Sbjct: 62  DTQDVTAEI--EKLEFRRMFSGQMDPNNVFLNIQSGSGGTEAQDWAEMLMRMYMRWADSQ 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK    ++ DG+ AGIK  TL I+G  AYGW + E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWFRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +K
Sbjct: 240 QHKNRDSAMKQLKSKLYEMELQKRNAEKNDLEDSKADIGWGSQIRSYVLD-QSRIK 294


>gi|262277608|ref|ZP_06055401.1| peptide chain release factor 1 [alpha proteobacterium HIMB114]
 gi|262224711|gb|EEY75170.1| peptide chain release factor 1 [alpha proteobacterium HIMB114]
          Length = 355

 Score =  186 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 115/335 (34%), Positives = 170/335 (50%), Gaps = 14/335 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL-ILLE 74
               + R   L        +  +        +E   + + I  +K     + D       
Sbjct: 7   VKEIISRYETLEKTLSQTDI--DKNTYVKNSKEYSSIGDIIIDVKNYIKMVEDKEGSEKI 64

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGTES 130
           L  +  D  + +     L  IK ++   + +     L   EAD  +A +E+ AG GG E+
Sbjct: 65  LEDKSADKELKEMAELELNEIKEKIGDLETKIKIFMLPKDEADEKNAIIEIRAGTGGLEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L  MY + A    +KTE + I D +  G K     + G N +  LK E GVHR+
Sbjct: 125 SLFAGDLFEMYQKVASNNGWKTEIISISDSDAGGYKEVVFSVTGKNVFSKLKFESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++++I E++ RID +R+SG GGQ VNTTDSAV
Sbjct: 185 QRVPKTETQGRVHTSAATVAVLP-EAEDVDVKIDENELRIDVFRSSGPGGQSVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIP+G+VV  Q E+SQHKNKA+A  +LR+KLYELE  K E+      + K++IG G 
Sbjct: 244 RITHIPSGIVVSQQDEKSQHKNKAKALKILRSKLYELERSKLEKER--SSARKSQIGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
              +IR+Y   P   V D R N+     SD L GD
Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLHKLSDFLSGD 335


>gi|313801610|gb|EFS42850.1| peptide chain release factor 1 [Propionibacterium acnes HL110PA2]
          Length = 361

 Score =  186 bits (473), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 111/343 (32%), Positives = 167/343 (48%), Gaps = 8/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  + T+  D  +  +      L R    L + +S    +     D     +L
Sbjct: 9   IDEVRRRLREIETQLADSAVLSDPSAMGRLGRRHARLRHVVSVADRVDQLRADVEAAEDL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D +   E      ++ L           S   D  DA +E+H+G GG ES  +A 
Sbjct: 69  TE--EDPAFGLEAERLRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 126

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192
            LLRMYTR+AE+  +    L     +  G ++  + +       AYG+LK E GVHR+ R
Sbjct: 127 DLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGGVHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S+ R HTS   + V P VD++    I  ++ R+D YR+SG GGQ VNTTDSAVR+
Sbjct: 187 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPAEVRVDVYRSSGPGGQGVNTTDSAVRL 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311
           TH+PTG+V  CQ ERSQ +NKA+A  MLRAK+  L  Q+  +  +     +   +    +
Sbjct: 246 THLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +R+Y   P   + D R   +      +L GDL D + A  A +
Sbjct: 306 VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 347


>gi|297182853|gb|ADI19004.1| protein chain release factor a [uncultured alpha proteobacterium
           HF0070_05I22]
          Length = 334

 Score =  186 bits (472), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 116/331 (35%), Positives = 177/331 (53%), Gaps = 13/331 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA---ISFIKEIQDRLCDNLILL 73
           D  ++R   + TK        +   A  L RE   L      I  ++ ++  L D + ++
Sbjct: 8   DKVLERRQEVETKLSRSAELSSKALA-DLSRELSELRPVCEQIELVRALESELKDAITMV 66

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYK--QFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             A  +D+   + E    L + ++ +E +  Q   L   + DS +A LEV AG GG E+ 
Sbjct: 67  VEAAGDDEMQAMAEAEVTLLKERIPIEKERLQLLLLPKDKDDSRNAILEVRAGTGGDEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L  MY R+A K  ++ E +E+ +    G K AT  I G + +  LK E GVHR+ 
Sbjct: 127 LFGANLFSMYQRFAAKNGWRFEVMEVSETGIGGYKEATATISGIDVFARLKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ V P   + ++I+I E+D RID +R+SG GGQ VNTTDSAVR
Sbjct: 187 RVPETEAGGRIHTSAATVAVLP-EAEEVDIDIDENDLRIDVFRSSGPGGQSVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV  Q E+SQHKN+A+A  +LRA+LY+ E  + E       + K ++G G  
Sbjct: 246 ITHMPTGIVVSQQDEKSQHKNRAKAMKILRARLYDAERARVESER--AAARKGQVGSGDR 303

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
             +IR+Y   P   V D R N+       V+
Sbjct: 304 SERIRTYNF-PQGRVTDHRINLTLYKLDRVM 333


>gi|270285531|ref|ZP_06194925.1| peptide chain release factor 2 [Chlamydia muridarum Nigg]
 gi|301336928|ref|ZP_07225130.1| peptide chain release factor 2 [Chlamydia muridarum MopnTet14]
          Length = 220

 Score =  186 bits (472), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 125/214 (58%), Positives = 155/214 (72%), Gaps = 1/214 (0%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY+RWA    +K E ++  DGE AGIK  TL + G  AYG+ K E GVHRLVRISP+DSN
Sbjct: 1   MYSRWANSHGWKVEVIDRLDGEVAGIKHITLKLIGEYAYGYAKAESGVHRLVRISPFDSN 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
           ++RHTSF+S+ V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAVRITH PTG+
Sbjct: 61  AKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGI 120

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           VV CQ ERSQ +N+    NMLRA++Y+  LQ+R E  N     K EI WG QIR+YV QP
Sbjct: 121 VVSCQSERSQIQNREACMNMLRARIYQKLLQERLEKQNTNRKEKKEISWGSQIRNYVFQP 180

Query: 320 YQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
           Y +VKD+RT  E  +   ++DG+ LD F+KA LA
Sbjct: 181 YTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYLA 214


>gi|195973772|gb|ACG63451.1| peptide chain release factor 2 [Francisella noatunensis subsp.
           orientalis]
          Length = 294

 Score =  186 bits (471), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 149/296 (50%), Positives = 198/296 (66%), Gaps = 3/296 (1%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+ L R++  L+N +   + I + L     LLELA E++        
Sbjct: 2   ELEDGSIWDNPEYAQNLGRQKVELENVVHNCEHISETLETLTELLELAEEDESLIQEIAK 61

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
                  ++  E  +F  + SG+ D N+ +L + +G+GGTE+QDWA ML+RMY RWA+ +
Sbjct: 62  DTQDVTAEI--EKLEFRRMFSGQMDPNNVFLNIQSGSGGTEAQDWAEMLMRMYMRWADSQ 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK    ++ DG+ AGIK  TL I+G  AYGW + E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVTVDDVSDGDVAGIKGCTLKIEGEYAYGWFRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQHVN TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPADXRVDTYRASGAGGQHVNKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +K
Sbjct: 240 QHKNRDSAMKQLKSKLYEMELQKRNAEKNDLEDSKADIGWGSQIRSYVLD-QSRIK 294


>gi|314955551|gb|EFS99954.1| peptide chain release factor 1 [Propionibacterium acnes HL027PA1]
          Length = 361

 Score =  186 bits (471), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 110/343 (32%), Positives = 167/343 (48%), Gaps = 8/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  + T+  D  +  +      L +    L + +S    +     D     +L
Sbjct: 9   IDEVRRRLRDIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D +   E      ++ L           S   D  DA +E+H+G GG ES  +A 
Sbjct: 69  TE--EDPAFGLEAERLRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 126

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192
            LLRMYTR+AE+  +    L     +  G ++  + +       AYG+LK E GVHR+ R
Sbjct: 127 DLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGGVHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S+ R HTS   + V P VD++    I  ++ R+D YR+SG GGQ VNTTDSAVR+
Sbjct: 187 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPAEVRVDVYRSSGPGGQGVNTTDSAVRL 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311
           TH+PTG+V  CQ ERSQ +NKA+A  MLRAK+  L  Q+  +  +     +   +    +
Sbjct: 246 THLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +R+Y   P   + D R   +      +L GDL D + A  A +
Sbjct: 306 VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 347


>gi|319760398|ref|YP_004124336.1| peptide chain release factor 2 [Candidatus Blochmannia vafer str.
           BVAF]
 gi|318039112|gb|ADV33662.1| peptide chain release factor 2 [Candidatus Blochmannia vafer str.
           BVAF]
          Length = 265

 Score =  186 bits (471), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 142/256 (55%), Positives = 180/256 (70%), Gaps = 2/256 (0%)

Query: 99  VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK-FKTEALEI 157
            +  +   +   E D+ + Y+++ +G+GG E+QDWANMLLRMY +W + +K F  +    
Sbjct: 6   FDKLEMYRMFFQEHDNCNCYVDIQSGSGGIEAQDWANMLLRMYLKWLDSKKGFYVKKTTE 65

Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217
             GE  GIKSAT+ I GP AYGWLK E GVHRLVR SP+DS  RRHTSF+SI+VYP +DD
Sbjct: 66  TSGEFLGIKSATIKIIGPYAYGWLKTESGVHRLVRKSPFDSGGRRHTSFASIFVYPELDD 125

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
           +I I I   D R+D YRASGAGGQHVN T+SAVR+THIPT VV QCQ +RSQHKNK QA 
Sbjct: 126 NITINIRPEDLRVDVYRASGAGGQHVNRTESAVRVTHIPTNVVTQCQSDRSQHKNKNQAI 185

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
             L+AKLY LELQK++    I E+ K +I WG QIRSY+L     +KDLRT +EK +   
Sbjct: 186 KQLKAKLYNLELQKKQYEKKIRENKKLDITWGSQIRSYILDD-SRIKDLRTGLEKRNVKA 244

Query: 338 VLDGDLDDFMKATLAI 353
           VL+GDLDDF+  ++  
Sbjct: 245 VLNGDLDDFVTMSIKQ 260


>gi|1865700|emb|CAA67778.1| peptide release factor 2 [Bacillus firmus]
          Length = 282

 Score =  186 bits (471), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 138/282 (48%), Positives = 191/282 (67%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++++L    G  D +   +R++ L+     P  W +   A+ ++ E   L   ++   E+
Sbjct: 1   MAKRLTDFRGSLDLEAKQERMAELDEFMTAPDFWDDQEAAQTVINESNGLKEQVNVFLEL 60

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +++  +  +  EL  EE D  + +E    ++ +   +   + + LLS   D N+A LE+H
Sbjct: 61  EEKYENLEVSYELVKEEADEELEKELEAGVKELISRLNDFELQLLLSEPYDKNNAILELH 120

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+MLLRMYTRW+E+R FK E ++   G+EAG+KS TLLIKG NAYG+LK
Sbjct: 121 PGAGGTESQDWASMLLRMYTRWSEQRGFKVETMDYLPGDEAGVKSVTLLIKGHNAYGYLK 180

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DS+ RRHTSF S  V P +DD++EI+I   D ++DTYRASGAGGQH
Sbjct: 181 AEKGVHRLVRISPFDSSGRRHTSFVSCEVMPELDDNVEIDIRTEDLKVDTYRASGAGGQH 240

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           +NTTDSA+RITH+PT  VV CQ ERSQ KN+ QA  ML+AKL
Sbjct: 241 INTTDSAIRITHLPTNTVVTCQSERSQIKNRDQAMKMLKAKL 282


>gi|32423703|gb|AAP81246.1| peptide chain release factor [Candidatus Portiera aleyrodidarum]
          Length = 297

 Score =  186 bits (471), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 146/295 (49%), Positives = 203/295 (68%), Gaps = 2/295 (0%)

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           K +++ + +N  LL LA+ E D   L     ++   + E+       L SG+ D N+AY+
Sbjct: 2   KTVENGIYNNAELLHLAITELDSKPLSFIKQDINFFEKELAKLDAVRLFSGDFDKNNAYV 61

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           E+ AG+GG ESQDWANMLLRMY+RWA    FKTE + ++ G+  G+KSATL IKG  A+G
Sbjct: 62  EIKAGSGGVESQDWANMLLRMYSRWAVTHDFKTETVNLNIGDLLGVKSATLHIKGDYAFG 121

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI-EISESDCRIDTYRASGA 238
           W++ E+G+HRLVR SP+DS+ RRHTSF+S++VYP +   +   +I+ ++ RIDTYR+SGA
Sbjct: 122 WMRTEKGIHRLVRKSPFDSSKRRHTSFTSVFVYPEITMKVHNIKINTNELRIDTYRSSGA 181

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVNTTDSAVRITH+PT +VV+CQ ERSQH NK +A  +L+ KLY+ + +K E     
Sbjct: 182 GGQHVNTTDSAVRITHLPTKIVVECQSERSQHSNKERALTLLKTKLYDFDKKKGEVERIN 241

Query: 299 GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
            E  K  I WG QIRSYVL     +KDLRT ++  +   VL+G+LD F++A++  
Sbjct: 242 IEKKKAGICWGNQIRSYVLDAQ-RIKDLRTGVKNNNCEKVLNGELDLFIEASIKQ 295


>gi|307128516|ref|YP_003880546.1| peptide chain release factor 1 [Candidatus Sulcia muelleri CARI]
 gi|306482978|gb|ADM89848.1| peptide chain release factor 1 [Candidatus Sulcia muelleri CARI]
          Length = 355

 Score =  185 bits (470), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 106/345 (30%), Positives = 185/345 (53%), Gaps = 8/345 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L +    P +  N      + +E ++++  I++    + +L +   +  L
Sbjct: 12  IESIKKRFYELYSLIIKPDIIHNNKNYIKIYKEYKNINKIINYYNNYKKKLKNLKEIENL 71

Query: 76  ALEEDDCSILQ--ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
              + D   L+        Q ++L++  K+ +     + +  +A +E+ AG GG E+  +
Sbjct: 72  IKLDSDKEFLELANIDKKSQILELKLILKKIQIYFENQNNHKNALMELRAGTGGDEACIF 131

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
              + RMYT + ++  +  E L +  G   G K   L I+G N YG LK E GVHR+ R+
Sbjct: 132 VEDIFRMYTMYFKELCWNYEILNMQHGPIKGYKEIILEIQGKNVYGTLKFESGVHRVQRV 191

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS  ++ ++P  D   +I +  SD + DT+RASGAGGQHVN T+SA+R+T
Sbjct: 192 PYTESQGRLHTSAITVAIFPEEDYKKKINLILSDIKRDTFRASGAGGQHVNKTESAIRLT 251

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ-- 311
           HIPTG++ +CQ+ERSQHKN  +A  +LRA++Y+ EL +++E   + +  K  I  G +  
Sbjct: 252 HIPTGIIAECQEERSQHKNYEKAMKVLRARIYQSELNQKKE--KLSKERKDLISTGDRSA 309

Query: 312 -IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            IR+Y   P   V D R N    +    ++G +++ + A   +++
Sbjct: 310 KIRTYNY-PQGRVTDHRINKSIYNLDHFMNGKINEMITALKILER 353


>gi|209554361|ref|YP_002284416.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 10
           str. ATCC 33699]
 gi|238054476|sp|B5ZAH6|RF1_UREU1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|209541862|gb|ACI60091.1| peptide chain release factor 1 [Ureaplasma urealyticum serovar 10
           str. ATCC 33699]
          Length = 359

 Score =  185 bits (470), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 103/362 (28%), Positives = 173/362 (47%), Gaps = 19/362 (5%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           M+ +++L         +    +   L  + E   +  +  + K +  + +          
Sbjct: 1   MEYNKKLYEA-----IERVAVKNKTLKQELE--TITSDFKKIKEINIQLKKTTKIAEAFA 53

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSND 116
           + + ++   ++  EL   E D  +++    +L   K  +   +       L +   D  +
Sbjct: 54  KYKQKIDAGIVAEELLNTEKDLELVELAQMDLDDAKASIPVIENELKIMLLPTDPNDDKN 113

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             +E+   AGG ES  +   L   Y  + E   +K + +E+      G    + +I G  
Sbjct: 114 VIVEMRPAAGGDESSIFVGNLFDTYRAYTESNNWKMKIIEMTPNAV-GFSFISFMISGEE 172

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
            Y  +K E GVHR+ R+   +S  R HTS  ++ V P   D +++ I+ SD RIDTYRAS
Sbjct: 173 VYSRMKFESGVHRVQRVPATESKGRVHTSTITVAVLP-EQDEVDVVINPSDLRIDTYRAS 231

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQHVN T+SAVRITHIPTGVV  CQ+ +SQ +N+  A  MLRAKL+E   +++    
Sbjct: 232 GAGGQHVNRTESAVRITHIPTGVVAACQEGKSQIENRETAMKMLRAKLWEAAQEQQNAEF 291

Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
                 K ++G G    +IR+Y   P   V D R ++       ++ G+LD+ + A +  
Sbjct: 292 ANL--RKNQVGTGDRSEKIRTYNY-PQNRVTDHRISLTLNKLDQIMMGELDEIIDALITD 348

Query: 354 KK 355
           ++
Sbjct: 349 EQ 350


>gi|315604645|ref|ZP_07879708.1| peptide chain release factor RF1 [Actinomyces sp. oral taxon 180
           str. F0310]
 gi|315313657|gb|EFU61711.1| peptide chain release factor RF1 [Actinomyces sp. oral taxon 180
           str. F0310]
          Length = 364

 Score =  185 bits (470), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 108/343 (31%), Positives = 156/343 (45%), Gaps = 11/343 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +     +  +  DP    +    + + R    L    +    +     D     EL
Sbjct: 10  LEPLLAEYEQVEAQMADPRTLADPQLMRRVGRRYAELGRVKAAADRLSAAAGDLQAAREL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A+E+   +      +  +    E   K          D+ D  LE+ AG GG ES  +A+
Sbjct: 70  AVEDRSFADEIPALEEEEAAAHEALVKIL--APRDPEDAMDVILEIKAGEGGEESALFAS 127

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVH 188
            L RMY R+AE   +    L     E  G K  TL I            +  LK E GVH
Sbjct: 128 DLARMYGRYAEAHGWSVTELSATHTELGGFKDVTLAIRAKGTPAPDEGVWAHLKYEGGVH 187

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS   ++V P ++D  EI I  +D RID YR+SG GGQ VNTTDS
Sbjct: 188 RVQRVPITESQGRIHTSAVGVFVMPEIEDDDEIVIDPADLRIDVYRSSGPGGQSVNTTDS 247

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307
           AVRITH+P+G+VV  Q E+SQ +NK  A  +L ++L      KRE  A+    S+   + 
Sbjct: 248 AVRITHLPSGIVVSMQNEKSQLQNKEAALRVLASRLAAEARAKREAEASAQRLSQVRTVD 307

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
              +IR+Y   P   + D RT  +  +   VL G LD  + + 
Sbjct: 308 RSERIRTYNF-PENRIADHRTGFKAHNLDAVLSGALDAVISSL 349


>gi|297517277|ref|ZP_06935663.1| peptide chain release factor 1 [Escherichia coli OP50]
          Length = 274

 Score =  185 bits (469), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 103/251 (41%), Positives = 152/251 (60%), Gaps = 6/251 (2%)

Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167
                D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E +   +GE  G K 
Sbjct: 16  PKDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKE 75

Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
               I G   YG LK E G HR+ R+   +S  R HTS  ++ V P + D+   +I+ +D
Sbjct: 76  IIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPAD 135

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  
Sbjct: 136 LRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAA 195

Query: 288 ELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLD 344
           E+ KR++      + +  +G G    + R+Y   P   V D R N+      +V++G LD
Sbjct: 196 EMAKRQQ--AEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVMEGKLD 252

Query: 345 DFMKATLAIKK 355
             ++  +   +
Sbjct: 253 MLIEPIIQEHQ 263


>gi|24638472|sp|P96314|RF2_BACFI RecName: Full=Peptide chain release factor 2; Short=RF-2
          Length = 294

 Score =  185 bits (469), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 138/282 (48%), Positives = 191/282 (67%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           ++++L    G  D +   +R++ L+     P  W +   A+ ++ E   L   ++   E+
Sbjct: 13  MAKRLTDFRGSLDLEAKQERMAELDEFMTAPDFWDDQEAAQTVINESNGLKEQVNVFLEL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
           +++  +  +  EL  EE D  + +E    ++ +   +   + + LLS   D N+A LE+H
Sbjct: 73  EEKYENLEVSYELVKEEADEELEKELEAGVKELISRLNDFELQLLLSEPYDKNNAILELH 132

Query: 123 AGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
            GAGGTESQDWA+MLLRMYTRW+E+R FK E ++   G+EAG+KS TLLIKG NAYG+LK
Sbjct: 133 PGAGGTESQDWASMLLRMYTRWSEQRGFKVETMDYLPGDEAGVKSVTLLIKGHNAYGYLK 192

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQH 242
            E+GVHRLVRISP+DS+ RRHTSF S  V P +DD++EI+I   D ++DTYRASGAGGQH
Sbjct: 193 AEKGVHRLVRISPFDSSGRRHTSFVSCEVMPELDDNVEIDIRTEDLKVDTYRASGAGGQH 252

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           +NTTDSA+RITH+PT  VV CQ ERSQ KN+ QA  ML+AKL
Sbjct: 253 INTTDSAIRITHLPTNTVVTCQSERSQIKNRDQAMKMLKAKL 294


>gi|327454116|gb|EGF00771.1| peptide chain release factor 1 [Propionibacterium acnes HL083PA2]
          Length = 361

 Score =  185 bits (469), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 110/343 (32%), Positives = 167/343 (48%), Gaps = 8/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  + T+  D  +  +      L +    L + +S    +     D     +L
Sbjct: 9   IDEVRRRLREIETQLADSAVLSDSSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D +   E      ++ L           S   D  DA +E+H+G GG ES  +A 
Sbjct: 69  TE--EDPAFGLEAERLRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 126

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192
            LLRMYTR+AE+  +    L     +  G ++  + +       AYG+LK E GVHR+ R
Sbjct: 127 DLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGGVHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S+ R HTS   + V P VD++    I  ++ R+D YR+SG GGQ VNTTDSAVR+
Sbjct: 187 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPAEVRVDVYRSSGPGGQGVNTTDSAVRL 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311
           TH+PTG+V  CQ ERSQ +NKA+A  MLRAK+  L  Q+  +  +     +   +    +
Sbjct: 246 THLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +R+Y   P   + D R   +      +L GDL D + A  A +
Sbjct: 306 VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 347


>gi|213859593|ref|ZP_03385297.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 317

 Score =  185 bits (469), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 108/302 (35%), Positives = 166/302 (54%), Gaps = 7/302 (2%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLS 109
            L +      + Q    D      +  + +   + QE      ++ +   +  Q   L  
Sbjct: 1   QLSDVSRCFTDWQQVQDDIETAQMMLDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPK 60

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
              D  +A+LEV AG GG E+  +A  L RMY+R+AE R+++ E + + +GE  G K   
Sbjct: 61  DPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEII 120

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +I+ +D R
Sbjct: 121 AKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLR 180

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E 
Sbjct: 181 IDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAET 240

Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            KR++      + +  +G G    + R+Y   P   V D R N+      + ++G LD  
Sbjct: 241 AKRQQ--AEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDML 297

Query: 347 MK 348
           ++
Sbjct: 298 IE 299


>gi|116326889|ref|YP_796609.1| peptide chain release factor 1 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116329879|ref|YP_799597.1| peptide chain release factor 1 [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122282347|sp|Q04W81|RF1_LEPBJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|122285261|sp|Q056R9|RF1_LEPBL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116119633|gb|ABJ77676.1| Peptide chain release factor 1 [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116123568|gb|ABJ74839.1| Peptide chain release factor 1 [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 354

 Score =  185 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 112/347 (32%), Positives = 181/347 (52%), Gaps = 14/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA---ISFIKEIQDRLCDNLIL 72
            +   ++   ++ +       ++    K L +ER  L      +    +I     D   L
Sbjct: 5   LEKIQEKYLRISEELNS---AKDPSSLKSLYKERSRLTPLYLKVEEYLKIYKDKKDAEEL 61

Query: 73  LELALEEDDCSILQETS-DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +    +E+  S+L+E      ++++   +  +   L        +  +E+ AG GG E+ 
Sbjct: 62  IPSEKDEEMHSMLKEEIRRASKKLEELEKELEILLLTPDPNSGKNILVEIRAGTGGEEAG 121

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L RMY+++A+K+K K+E ++       G+K     ++   AY   K E G HR+ 
Sbjct: 122 LFVADLFRMYSKFADKQKIKSEIIDSAPTGIGGLKEIIFALEDERAYDLFKFEGGTHRVQ 181

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   +S  R HTS  ++ V P   D  EIEI+E+D RID YR+SGAGGQHVNTTDSAVR
Sbjct: 182 RIPSTESGGRIHTSAVTVAVLP-EADEEEIEINENDLRIDVYRSSGAGGQHVNTTDSAVR 240

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTGVVV CQ E+SQHKNKA+A  +L A++ E + + +++ ++  +  K  IG G  
Sbjct: 241 ITHIPTGVVVACQDEKSQHKNKAKALRILSARILEKQTEDKKQASDAIK--KQMIGSGDR 298

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             ++R+Y   P     D R      + S +++GDL++ + A     +
Sbjct: 299 SERVRTYNF-PQGRCTDHRIGFTSHNLSAIMEGDLEELIGALTEEDR 344


>gi|220918000|ref|YP_002493304.1| peptide chain release factor 2 [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219955854|gb|ACL66238.1| peptide chain release factor 2 [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 309

 Score =  185 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 153/292 (52%), Positives = 206/292 (70%)

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            ++  L D   L ELA E  D +   E ++  + +  ++E  + + +LSG  D+  A +E
Sbjct: 7   AVRRALDDAQALCELAEEARDEATRAEAAEAAEAVGRQLEGLELQKMLSGPHDAAGAIVE 66

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           V +GAGG E+ DWA ML RMY R+ E+R ++ E  ++  GEEAGI SA+ +++G + YGW
Sbjct: 67  VKSGAGGVEAMDWAAMLYRMYVRYCERRGWEVEPADLVAGEEAGISSASFIVRGDHPYGW 126

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E+GVHRLVRISP+D N+RR TSF+++ V P ++D I I+I E+D RIDTYR+SGAGG
Sbjct: 127 LKAEKGVHRLVRISPFDQNARRQTSFAAVDVTPEIEDDIVIDIKEADVRIDTYRSSGAGG 186

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VN TDSAVR+TH+PTG+VV  Q ERSQ KN++ AW +LRAKLY+LE +KR    +  E
Sbjct: 187 QKVNKTDSAVRMTHLPTGIVVAVQNERSQQKNRSVAWKILRAKLYDLEEKKRAAARDAAE 246

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           + K +I +G QIRSYVLQPYQMVKDLRT +E     DVLDGDLD F++  L 
Sbjct: 247 ALKKDIDFGSQIRSYVLQPYQMVKDLRTGVETGKVDDVLDGDLDPFIQPYLM 298


>gi|87300884|ref|ZP_01083726.1| peptide chain release factor 1 [Synechococcus sp. WH 5701]
 gi|87284755|gb|EAQ76707.1| peptide chain release factor 1 [Synechococcus sp. WH 5701]
          Length = 367

 Score =  185 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 105/348 (30%), Positives = 168/348 (48%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA---ISFIKEIQDRLCDNLIL 72
            + A +    L  +  DP +  +  E + L +ER  L+     +   + +Q +L +   L
Sbjct: 10  LEAADRTFQALERQLADPAVAADPSELRRLSKERARLEPLATGLGHWQSLQRQLKEAQQL 69

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQF--ESLLSGEADSNDAYLEVHAGAGGTES 130
              +  + +   L +        +L+   +Q     L S   D     LE+ AG GG E+
Sbjct: 70  ARQSKGDPEMEALIQEELRELGAQLDGLEQQLTLALLPSDPRDERSVMLEIRAGTGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R+A+   +  + L   + +  G K   L I+G   Y  LK E GVHR+
Sbjct: 130 ALWAGDLARMYERFAQTVGWSVQPLSASESDLGGFKELILAIRGDGVYSQLKYEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D +E+++  +D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADPVEVQLDPADLDISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
            + H PTG+ V C QERSQ +N+ +A  +LRAKL E EL +     +       ++G G 
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERALEILRAKLLERELAEAAAAESSARR--AQVGSGE 306

Query: 311 Q---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +   IR+Y  +    V D R      +   VL G L + + A +A ++
Sbjct: 307 RSEKIRTYNAKD-NRVTDHRLGR-NFALEPVLQGQLAEVIGACVAAEQ 352


>gi|37523990|ref|NP_927367.1| peptide chain release factor 1 [Gloeobacter violaceus PCC 7421]
 gi|46576716|sp|Q7ND15|RF1_GLOVI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|35214996|dbj|BAC92362.1| translation releasing factor RF-1 [Gloeobacter violaceus PCC 7421]
          Length = 364

 Score =  185 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 95/347 (27%), Positives = 180/347 (51%), Gaps = 12/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +  + L T+  DP L  N  E   ++R R  L+  +      Q    +   + ++
Sbjct: 11  LNDIERTYNDLTTRLGDPSLASNPQEMLRIVRMRAGLERTVEAYDHWQRLCAERNAVRQM 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +E D  + +   +    ++  +   +       L     D  +  LE+ AG GG E+ 
Sbjct: 71  IRDEQDPELRELAEEEHTGLEERIARLEDEITLLLLPRDPNDDKNVMLEIRAGTGGDEAA 130

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L+RMY R+AE + +  +       E  G K   L I+G + Y  LK E GVHR+ 
Sbjct: 131 IFAGDLMRMYIRYAEGQGWSVKLASESPAEMGGFKEVILEIRGESVYSKLKFEAGVHRVQ 190

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   ++  R HTS +++ + P   + +++EI+ +D  I T R+ GAGGQ+VN  ++AV 
Sbjct: 191 RVPVTETQGRVHTSTATVAIMP-EVEEVDVEINPNDIEITTTRSGGAGGQNVNKVETAVH 249

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           + H P+G+ + CQ+ERSQ +NKA+A  +LR KLY++  ++RE+   +    ++++G G  
Sbjct: 250 LVHKPSGIHIHCQEERSQLQNKARAMQILRVKLYDI--KQREQHEQVSGLRRSQVGTGDR 307

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y  +    V D R + +  + +  ++G+++  +++ +A  +
Sbjct: 308 SEKIRTYNYKD-NRVTDHRLS-QNFTLNTAIEGEIETLIQSAIAAAQ 352


>gi|242089427|ref|XP_002440546.1| hypothetical protein SORBIDRAFT_09g002890 [Sorghum bicolor]
 gi|241945831|gb|EES18976.1| hypothetical protein SORBIDRAFT_09g002890 [Sorghum bicolor]
          Length = 416

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 126/345 (36%), Positives = 185/345 (53%), Gaps = 15/345 (4%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL--- 75
             QR ++L  +   P    +  E     +E + L++ +  IKE++ +  +   L  L   
Sbjct: 68  IEQRSAYLQEQINQPA--ASPEEYSRANKEFRKLESTMELIKELRSKREEIEGLKSLVTN 125

Query: 76  --ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
               ++      +E  + ++  K          L   EAD  D  LEV AG GG E+  +
Sbjct: 126 AREEKDMREMAAEELLEAVEVEKRLQHELFRSLLPKDEADERDCILEVRAGTGGEEASLF 185

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  + RMY ++A+K  +K + ++I +    G K A+  I GP A+G LK E G+HR+ R+
Sbjct: 186 AMDIFRMYEKYAQKNGWKFDVIDIMESAVKGYKEASGTISGPGAFGKLKFESGIHRVQRV 245

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              + + R HTS  S+ V P   D +++++   D RIDTYR+ G+GGQ VNTTDSAVRIT
Sbjct: 246 PVTEKSGRVHTSAVSVAVLPQ-ADEVDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRIT 304

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           HIPTG VV  Q ERSQH NKA+A  +LRA+LYELE  +     +   S   +IG G    
Sbjct: 305 HIPTGTVVAIQDERSQHMNKAKALKVLRARLYELERHRLHMDRSKLRSE--QIGSGDRSE 362

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354
           +IR+Y   P   V D R  I   S +DV++G+ LD F+ A L  +
Sbjct: 363 RIRTYNF-PQGRVTDHRVGITHHSIADVMEGESLDVFVDALLLQE 406


>gi|320169793|gb|EFW46692.1| peptide chain release factor 1 [Capsaspora owczarzaki ATCC 30864]
          Length = 523

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 107/368 (29%), Positives = 189/368 (51%), Gaps = 25/368 (6%)

Query: 2   KLSRQLN-CLGGLFDWDNAVQRLSFLNTKTED--PHLWQNVIEAKMLMR-ERQHLDNAIS 57
           ++  +L   +       N  +    L  +     P   + +     +++ +   L+  + 
Sbjct: 143 EIKSKLTPAIRSY--LSNVTRDYQALTQQMTSISPSATKEIN----VLKGQIAALNPLVD 196

Query: 58  FIKEI---QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSG 110
            ++ +   +  + D   ++E +  E+D  + +           ++   + E     +   
Sbjct: 197 ALQRMTAKRKDIDDLDAMVEASRNENDVEMRKMAQSEWTDAVEQLYELEQELLNVLVPKN 256

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D  +A LEV AG GG E+  +++ +  MY  +AE R +K E ++I   +  G K A+ 
Sbjct: 257 EVDDRNAILEVRAGTGGLEASLFSSDMFTMYQNYAEIRGWKFEVIDISRSDVGGFKEASA 316

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G   +G LK E GVHR+ R+   +S  R HTS  ++ + P     ++IE++E D RI
Sbjct: 317 TISGYGVFGHLKFESGVHRVQRVPQTESQGRVHTSTVTVALLP-EAQDVDIELNERDLRI 375

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           +T RASGAGGQHVN T+SA+R+THIP+G+ V  Q++RSQHKN+A+A+++LRA+LYE++ +
Sbjct: 376 ETMRASGAGGQHVNKTESAIRVTHIPSGIAVHVQEDRSQHKNRAKAYSVLRARLYEIQRE 435

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDF 346
           K  +      +   ++G G    +IR+Y   P   V D R N+      + L G+ LD+ 
Sbjct: 436 KLAQERAAHRAE--QVGTGSRSERIRTYNF-PQDRVTDHRVNVTLHGVPEFLLGEGLDEI 492

Query: 347 MKATLAIK 354
           + +    +
Sbjct: 493 IASLRTHE 500


>gi|195973776|gb|ACG63453.1| peptide chain release factor 2 [Francisella noatunensis]
          Length = 294

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 151/296 (51%), Positives = 205/296 (69%), Gaps = 3/296 (1%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           + ED  +W N   A+   R++  L+N +   + I + L    +   L L E+D S++QE 
Sbjct: 2   ELEDGSIWDNPEYAQNFGRQKVELENIVHNCEHISETLE--TLTELLELAEEDESLMQEI 59

Query: 89  SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
           + + Q +  E+E  +F  + SG+ D N+A+L++ +G+GGTE+QDWA ML+RMY RWA+  
Sbjct: 60  AKDTQDVTAEIEKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWAEMLMRMYMRWADSH 119

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            FK    ++ DG+ AGIK   L I+G  AYGWL+ E G+HRLVR SP+DSNS+RHTSF+S
Sbjct: 120 GFKVTVDDVSDGDVAGIKGCALKIEGEYAYGWLRTETGIHRLVRKSPFDSNSKRHTSFAS 179

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           +++ P VDD I+IEI+ +D R+DTYRASGAGGQH+N TDSAVRITHIPT +VVQ Q +RS
Sbjct: 180 VFISPEVDDDIDIEINPADLRVDTYRASGAGGQHINKTDSAVRITHIPTNIVVQSQSDRS 239

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           QHKN+  A   L++KLYE+ELQKR    N  E SK +IGWG QIRSYVL     +K
Sbjct: 240 QHKNRDSAMKQLKSKLYEMELQKRNAEKNALEDSKADIGWGSQIRSYVLD-QSRIK 294


>gi|289428601|ref|ZP_06430285.1| peptide chain release factor 1 [Propionibacterium acnes J165]
 gi|289158295|gb|EFD06514.1| peptide chain release factor 1 [Propionibacterium acnes J165]
 gi|313807753|gb|EFS46240.1| peptide chain release factor 1 [Propionibacterium acnes HL087PA2]
 gi|313825434|gb|EFS63148.1| peptide chain release factor 1 [Propionibacterium acnes HL063PA1]
 gi|314978719|gb|EFT22813.1| peptide chain release factor 1 [Propionibacterium acnes HL072PA2]
 gi|315088524|gb|EFT60500.1| peptide chain release factor 1 [Propionibacterium acnes HL072PA1]
 gi|327331707|gb|EGE73444.1| peptide chain release factor 1 [Propionibacterium acnes HL096PA3]
 gi|327443483|gb|EGE90137.1| peptide chain release factor 1 [Propionibacterium acnes HL013PA2]
 gi|332675656|gb|AEE72472.1| peptide chain release factor 1 [Propionibacterium acnes 266]
          Length = 361

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 109/343 (31%), Positives = 166/343 (48%), Gaps = 8/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  + T+  D  +  +      L +    L + +S    +     D     +L
Sbjct: 9   IDEVRRRLREIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D +   E      ++ L           S   D  DA +E+H+G GG ES  +A 
Sbjct: 69  TE--EDPAFGLEAERLRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 126

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192
            LLRMYTR+AE+  +    L     +  G ++  + +       AYG+LK E GVHR+ R
Sbjct: 127 DLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGGVHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S+ R HTS   + V P VD++    I  ++ R+D YR+SG GGQ VNTTDSAVR+
Sbjct: 187 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPAEVRVDVYRSSGPGGQGVNTTDSAVRL 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311
           TH+ TG+V  CQ ERSQ +NKA+A  MLRAK+  L  Q+  +  +     +   +    +
Sbjct: 246 THLRTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +R+Y   P   + D R   +      +L GDL D + A  A +
Sbjct: 306 VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 347


>gi|315077778|gb|EFT49829.1| peptide chain release factor 1 [Propionibacterium acnes HL053PA2]
          Length = 361

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 109/343 (31%), Positives = 166/343 (48%), Gaps = 8/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +RL  + T+  D  +  +      L +    L + +S    +     D     +L
Sbjct: 9   IDEVRRRLREIETQLADSAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D +   E      ++ L           S   D  DA +E+H+G GG ES  +A 
Sbjct: 69  TE--EDPAFGLEAERLRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 126

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192
            LLRMYTR+AE+  +    L     +  G ++  + +       AYG+LK E GVHR+ R
Sbjct: 127 DLLRMYTRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPSRPAYGYLKHEGGVHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S+ R HTS   + V P VD++    I  ++ R+D YR+SG GGQ VNTTDSAVR+
Sbjct: 187 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPAEVRVDVYRSSGPGGQGVNTTDSAVRL 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311
           TH+PTG+V  CQ ERSQ +NKA+A  MLRAK+  L  Q+  +  +     +   +    +
Sbjct: 246 THLPTGIVASCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +R+Y       + D R   +      +L GDL D + A  A +
Sbjct: 306 VRTYNFS-ENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 347


>gi|254780874|ref|YP_003065287.1| peptide chain release factor 1 [Candidatus Liberibacter asiaticus
           str. psy62]
 gi|254040551|gb|ACT57347.1| peptide chain release factor 1 [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 357

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 106/347 (30%), Positives = 167/347 (48%), Gaps = 18/347 (5%)

Query: 18  NAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQ---HLDNAISFIKEIQDRLCDNLILL 73
           +   R + +  +  + P +         L  E      + + IS   + +    D   ++
Sbjct: 11  DLKNRFAEIELRMSESPSV----DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQF--ESLLSGEADSNDAYLEVHAGAGGTESQ 131
                + +   L +        ++     +     L     D     LE+ AG GG+E+ 
Sbjct: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L RMY R+A  RK+K E L   D ++ G K     I G   +  +K E GVHR+ 
Sbjct: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +++ R HTS +++ V P     I+++I   D RIDT RASG+GGQHVNTTDSAVR
Sbjct: 187 RVPATEASGRVHTSAATVAVLP-EAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG++V    E+SQH+N+ +A  +LRA+LY++E ++         + K +IG G  
Sbjct: 246 ITHIPTGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANER--SANRKLQIGSGDR 302

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             +IR+Y       + D R N+       VL G +DD +   L   +
Sbjct: 303 SERIRTYNFS-QGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQ 348


>gi|311086167|gb|ADP66249.1| peptide chain release factor 2 [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
          Length = 248

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 133/247 (53%), Positives = 184/247 (74%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S + D  D Y+++ +G+GGT++QDW+ MLLRMY RWA+K+ F TE ++   GE  GIK
Sbjct: 1   MFSKKNDHYDCYIDIQSGSGGTDAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           S+T+ + G  A+GW + E G+HRL+R SP+DS  RRHTSFSSI++YP +++ I+I I+ S
Sbjct: 61  SSTIKVSGEYAFGWFRTETGIHRLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITH+PT +V QCQ  RSQHKNK QA   +++KLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNRTESAVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           ++++K++E     E +K++I WG QIRSY+L     +KDLRT +EK     VLDGDLDDF
Sbjct: 181 IQMRKKQEEKQKIEQNKSDITWGNQIRSYILD-NSKIKDLRTGVEKNHVQSVLDGDLDDF 239

Query: 347 MKATLAI 353
           ++ +L +
Sbjct: 240 IEQSLIM 246


>gi|119952993|ref|YP_945202.1| peptide chain release factor 1 [Borrelia turicatae 91E135]
 gi|254790864|sp|A1QYZ0|RF1_BORT9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119861764|gb|AAX17532.1| bacterial peptide chain release factor 1 [Borrelia turicatae
           91E135]
          Length = 357

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 120/331 (36%), Positives = 187/331 (56%), Gaps = 11/331 (3%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              ++  L  K +D +L +N  E   +++E  +L+       E ++ +       ++  E
Sbjct: 9   IESKIKILEEKLQDTNLIKNQKEYAKVIKEYNYLEKIKEKKDEYENIISQIDENQKILSE 68

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           E++  + +     L  + L+ +  +       L   E D+ +  +E+ AG GG E+  +A
Sbjct: 69  EENLEMKELIKQELTHLNLKKDEIEHTIKILLLHQDENDNKNIIIEIRAGTGGEEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           + L  MYT+++EK+K+KTE +  ++ E  G K  +  IKG   +  LK E GVHR+ R+ 
Sbjct: 129 HNLYEMYTKYSEKKKWKTELINFNETELGGFKEVSFEIKGKEVFKKLKHESGVHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +SN R  TS +++ V P V+++    I+E D RID YR+SGAGGQHVNTTDSAVRITH
Sbjct: 189 ITESNGRLQTSAATVAVLPEVEETDIE-INEKDLRIDVYRSSGAGGQHVNTTDSAVRITH 247

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VVQCQ ERSQHKNK QA  +LRA+LY+ E  K++E        K ++G G    +
Sbjct: 248 LPTGIVVQCQNERSQHKNKDQAMKILRARLYKFEDLKKQE--QRSNDRKQQVGSGDRSER 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           IR+Y   P   V + R NI      +++ G+
Sbjct: 306 IRTYNF-PQNRVTEHRANISLYKLEEIMQGE 335


>gi|91762346|ref|ZP_01264311.1| protein release factor Class I (RF-1) [Candidatus Pelagibacter
           ubique HTCC1002]
 gi|91718148|gb|EAS84798.1| protein release factor Class I (RF-1) [Candidatus Pelagibacter
           ubique HTCC1002]
          Length = 357

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 110/344 (31%), Positives = 179/344 (52%), Gaps = 15/344 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLIL 72
            ++ + + S L  +     +  +        +E   L+  I         +    D   +
Sbjct: 7   IEDLISKHSVLEKELSSGEV--DKKLFAEKSKEYSDLNEVIDDARKYFSYEGEKKDLEKI 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS--GEADSNDAYLEVHAGAGGTES 130
           L  +  +++   + E      +++ E   K+ +  L    EAD  +A +E+ AG GG E+
Sbjct: 65  LSDSNSDNEFKEMAEVELKDLKLENETIEKKLKLFLLPKDEADKKNAIIEIRAGTGGLEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L +MY + + ++K++ E + +   E  G+K     I+G N Y  LK E GVHR+
Sbjct: 125 SLFAADLFKMYEKVSHQKKWELELISMSQSEAGGLKEVIASIRGKNIYSTLKYESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++I+I++SD RID +RA G GGQ VNTTDSAV
Sbjct: 185 QRVPDTETQGRVHTSAATVAVLP-EAEEVDIKINDSDLRIDVFRAGGPGGQSVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG+ V  Q ++SQHKNKA+   +LR++LYELE  + E      E  K++IG G 
Sbjct: 244 RITHIPTGLSVSQQDQKSQHKNKAKGMLILRSRLYELERSRIEGER--SEDRKSKIGTGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
              +IR+Y   P   V D R N+        L+G+  D+ ++  
Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLHKLEAFLEGEAFDEMVENL 344


>gi|86159138|ref|YP_465923.1| peptide chain release factor 2 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85775649|gb|ABC82486.1| bacterial peptide chain release factor 2 (bRF-2) [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 309

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 154/292 (52%), Positives = 205/292 (70%)

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            ++  L D   L ELA E  D +   E ++  + +  ++E  + + +LSG  D+  A +E
Sbjct: 7   AVRRSLDDAQALNELAEEARDEATRAEAAEAAEAVGRQLEGLELQKMLSGPHDAAGAIVE 66

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           V +GAGG E+ DWA ML RMY R+ E+R ++ E  ++  GEEAGI SA+ +++G + YGW
Sbjct: 67  VKSGAGGVEAMDWAAMLYRMYVRYCERRGWEVEPADLVAGEEAGISSASFIVRGDHPYGW 126

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LK E+GVHRLVRISP+D N+RR TSF+++ V P +DD I I+I E+D RIDTYR+SGAGG
Sbjct: 127 LKAERGVHRLVRISPFDQNARRQTSFAAVDVTPEIDDDIVIDIKEADVRIDTYRSSGAGG 186

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VN TDSAVR+TH+PTG+VV  Q ERSQ KN+  AW +LRAKLY+LE +KR    +  E
Sbjct: 187 QKVNKTDSAVRMTHLPTGIVVAVQNERSQQKNRNVAWKILRAKLYDLEEKKRAAARDAAE 246

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           + K +I +G QIRSYVLQPYQMVKDLRT +E     DVLDGDLD F++  L 
Sbjct: 247 ALKKDIDFGSQIRSYVLQPYQMVKDLRTGVETGKVDDVLDGDLDPFIQPYLM 298


>gi|68171785|ref|ZP_00545129.1| Peptide chain release factor 1 [Ehrlichia chaffeensis str. Sapulpa]
 gi|67998796|gb|EAM85504.1| Peptide chain release factor 1 [Ehrlichia chaffeensis str. Sapulpa]
          Length = 311

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 111/305 (36%), Positives = 173/305 (56%), Gaps = 10/305 (3%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEAD 113
           I     +Q  +     L+     + +   L +     ++ +L     + +       + D
Sbjct: 1   IDQYNILQKDIAGLEELINNPETDHELKSLAKEEFYERQKQLPKVKHKLKLSLLPKDKDD 60

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
           + +A LE+ AG GG E+  +   L RMYT++AE++ +K E +        G K  +L I 
Sbjct: 61  ARNAILEIRAGTGGEEAALFVTDLYRMYTKYAEQKNWKFEQINSSSTGIGGHKEISLCIS 120

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G N +  LK E GVHR+ R+   +++ R HTS +++ V P   + ++++I E D RID Y
Sbjct: 121 GSNVFARLKFESGVHRVQRVPETEASGRLHTSAATVAVLP-EIEEVDLKIDEKDLRIDVY 179

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R+SG GGQ VNTTDSAVRITHIP+G+VV  Q E+SQHKNK++A  +LRA+LY LE QKR+
Sbjct: 180 RSSGPGGQSVNTTDSAVRITHIPSGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKRD 239

Query: 294 EIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKA 349
               I +  K++IG G    +IR+Y   P   + D R N+      D++ +G+LD+F++A
Sbjct: 240 AE--ISQMRKSQIGSGDRSERIRTYNF-PQSRITDHRINLTLYRLDDIMKEGNLDEFIEA 296

Query: 350 TLAIK 354
            +A  
Sbjct: 297 LIAED 301


>gi|71083224|ref|YP_265943.1| protein release factor class I [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|119361574|sp|Q4FN99|RF1_PELUB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71062337|gb|AAZ21340.1| protein release factor Class I (RF-1) [Candidatus Pelagibacter
           ubique HTCC1062]
          Length = 357

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 110/344 (31%), Positives = 179/344 (52%), Gaps = 15/344 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLIL 72
            ++ + + S L  +     +  +        +E   L+  I         +    D   +
Sbjct: 7   IEDLISKHSILEKELSSGEV--DKKLFAEKSKEYSDLNEVIDDARKYFSYEGEKKDLEKI 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS--GEADSNDAYLEVHAGAGGTES 130
           L  +  +++   + E      +++ E   K+ +  L    EAD  +A +E+ AG GG E+
Sbjct: 65  LSDSNSDNEFKEMAEVELKDLKLENETIEKKLKLFLLPKDEADKKNAIIEIRAGTGGLEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L +MY + + ++K++ E + +   E  G+K     I+G N Y  LK E GVHR+
Sbjct: 125 SLFAADLFKMYEKVSHQKKWELELISMSQSEAGGLKEVIASIRGKNIYSTLKYESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++I+I++SD RID +RA G GGQ VNTTDSAV
Sbjct: 185 QRVPDTETQGRVHTSAATVAVLP-EAEEVDIKINDSDLRIDVFRAGGPGGQSVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG+ V  Q ++SQHKNKA+   +LR++LYELE  + E      E  K++IG G 
Sbjct: 244 RITHIPTGLSVSQQDQKSQHKNKAKGMLILRSRLYELERSRIEGER--SEDRKSKIGTGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
              +IR+Y   P   V D R N+        L+G+  D+ ++  
Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLHKLEAFLEGEAFDEMVENL 344


>gi|254690018|ref|ZP_05153272.1| peptide chain release factor 1 [Brucella abortus bv. 6 str. 870]
          Length = 337

 Score =  183 bits (464), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 110/324 (33%), Positives = 173/324 (53%), Gaps = 18/324 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 23  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 78

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  +        +      +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 79  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 138

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 139 TLFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 198

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 199 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 257

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK    +   ++ ++++G G 
Sbjct: 258 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 314

Query: 310 --RQIRSYVLQPYQMVKDLRTNIE 331
              +IR+Y   P   V D R N+ 
Sbjct: 315 RSERIRTYNF-PQGRVTDHRINLT 337


>gi|311086739|gb|ADP66820.1| peptide chain release factor 2 [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
          Length = 248

 Score =  183 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 133/247 (53%), Positives = 184/247 (74%), Gaps = 1/247 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S + D  D Y+++ +G+GGT++QDW+ MLLRMY RWA+K+ F TE ++   GE  GIK
Sbjct: 1   MFSKKNDHYDCYIDIQSGSGGTDAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           S+T+ + G  A+GW + E G+HRL+R SP+DS  RRHTSFSSI++YP +++ I+I I+ S
Sbjct: 61  SSTIKVSGEYAFGWFRTETGIHRLIRKSPFDSGKRRHTSFSSIFIYPDINEKIDININYS 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RID YRASGAGGQHVN T+SAVRITH+PT +V QCQ  RSQHKNK QA   +++KLYE
Sbjct: 121 DLRIDVYRASGAGGQHVNRTESAVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYE 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           ++++K++E     E +K++I WG QIRSY+L     +KDLRT +EK     VLDGDLDDF
Sbjct: 181 IQIRKKQEEKQKIEQNKSDITWGNQIRSYILD-NSKIKDLRTGVEKNHVQSVLDGDLDDF 239

Query: 347 MKATLAI 353
           ++ +L +
Sbjct: 240 IEQSLIM 246


>gi|195650889|gb|ACG44912.1| peptide chain release factor 1 [Zea mays]
          Length = 356

 Score =  182 bits (462), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 124/345 (35%), Positives = 187/345 (54%), Gaps = 15/345 (4%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             QR ++L  +   P    +  E     +E + L++ +  IK+++ +  +   L  L   
Sbjct: 8   IEQRSAYLQEQINQPA--ASPEEYSRANKEFRKLESTMELIKDLRSKQEEIEGLKSLVAN 65

Query: 79  EDDCSILQETSDNLQRI-----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           + +   ++E ++    +     K          L   EAD  D  LEV AG GG E+  +
Sbjct: 66  DHEEKDMREMAEEELLVAVEEEKRLQHELFRSLLPKDEADEKDCILEVRAGTGGEEASLF 125

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  + RMY ++A+K  +K + ++I +    G K A+  I GP A+G LK E G+HR+ R+
Sbjct: 126 AMDIFRMYEKYAQKNGWKFDVIDIMESAVKGYKEASGTISGPGAFGKLKFESGIHRVQRV 185

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              + + R HTS  S+ V P   D +++++   D RIDTYR+ G+GGQ VNTTDSAVRIT
Sbjct: 186 PATEKSGRMHTSAVSVAVLPQ-ADEVDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRIT 244

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           HIPTG VV  Q ERSQH NKA+A  +LRA+LYELE ++     +   S   +IG G    
Sbjct: 245 HIPTGTVVAIQDERSQHMNKAKALKVLRARLYELERRRLHMDRSKLRSE--QIGSGDRSE 302

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354
           +IR+Y   P   V D R  +   S +DV++G+ LD F+ A L  +
Sbjct: 303 RIRTYNF-PQGRVTDHRVGVTHHSIADVMEGESLDMFVDALLLQE 346


>gi|260755553|ref|ZP_05867901.1| peptide chain release factor 1 [Brucella abortus bv. 6 str. 870]
 gi|260675661|gb|EEX62482.1| peptide chain release factor 1 [Brucella abortus bv. 6 str. 870]
          Length = 342

 Score =  182 bits (462), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 110/324 (33%), Positives = 173/324 (53%), Gaps = 18/324 (5%)

Query: 17  DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 28  DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 83

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +    + ++  +        +      +  Q   L    AD  +A LE+ AG GG E+
Sbjct: 84  RDDASTDAEMRALAVEELPEVEKRIAVLEQDVQILLLPKDAADDKNAILEIRAGTGGLEA 143

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L RMY R+A ++ ++ E +   +G+  G K     + G   +  LK E GVHR+
Sbjct: 144 TLFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIATVSGKGVFSKLKFESGVHRV 203

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I+IEI   D RIDT RASGAGGQHVNTTDSAV
Sbjct: 204 QRVPETEAGGRIHTSAATVAVLP-EAEDIDIEIRNEDIRIDTMRASGAGGQHVNTTDSAV 262

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK    +   ++ ++++G G 
Sbjct: 263 RITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK--AESERSQARRSQVGSGD 319

Query: 310 --RQIRSYVLQPYQMVKDLRTNIE 331
              +IR+Y   P   V D R N+ 
Sbjct: 320 RSERIRTYNF-PQGRVTDHRINLT 342


>gi|212697120|ref|ZP_03305248.1| hypothetical protein ANHYDRO_01686 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675895|gb|EEB35502.1| hypothetical protein ANHYDRO_01686 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 263

 Score =  182 bits (462), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 104/257 (40%), Positives = 158/257 (61%), Gaps = 7/257 (2%)

Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
            +   +     D  D  +E+ AGAGG E+  +A  L RMY  +A+K+ +KTE +++    
Sbjct: 1   MKILLIPQDPNDHKDVIVEIRAGAGGEEAGLFAGNLYRMYHMYADKQNYKTEDIDVSSQG 60

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
             G+K AT +++G  AY  LK E GVHR+ R+   +S  R HTS +++ V P   D ++I
Sbjct: 61  IGGMKEATFIVRGEGAYSKLKYESGVHRVQRVPETESGGRIHTSTATVAVLP-EADEVDI 119

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           +I  +D R D YR+SG GGQ VNTTDSAVR+THIPTG+VV CQ E+SQ KNK +A  +LR
Sbjct: 120 KIDPNDIRTDVYRSSGNGGQSVNTTDSAVRLTHIPTGLVVTCQDEKSQIKNKDKAMRVLR 179

Query: 282 AKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           A+LYE+E +KR++   I ++ K+++G G    +IR+Y   P   + D R N       D 
Sbjct: 180 ARLYEMEEEKRQKE--ISDNRKSQVGTGDRSERIRTYNY-PQGRITDHRINKTIYQLDDF 236

Query: 339 LDGDLDDFMKATLAIKK 355
           LDG++++ + + +   +
Sbjct: 237 LDGNIEEMIDSLITEDQ 253


>gi|115462961|ref|NP_001055080.1| Os05g0277300 [Oryza sativa Japonica Group]
 gi|113578631|dbj|BAF16994.1| Os05g0277300 [Oryza sativa Japonica Group]
          Length = 349

 Score =  182 bits (461), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 122/342 (35%), Positives = 185/342 (54%), Gaps = 15/342 (4%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA-L 77
             QR ++L  +   P    +  E     +E   L++ +  I+E++ +  +   L  L   
Sbjct: 1   IEQRSAYLQEQINQPD--ASPEEYSRANKELHKLESTMDMIEELRSKQEEIEGLKSLMTN 58

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQDW 133
             ++    +  +  L +   E +  Q +         EAD  D  LEV AG GG E+  +
Sbjct: 59  SVEEKDFREMAAQELLQALEEEKQLQHKLFRSLLPKDEADERDCILEVRAGTGGEEASLF 118

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  + +MY ++++K  +K +A++I +    G K A+  I GP AYG LK E G+HR+ R+
Sbjct: 119 AMDIFKMYEKYSQKNGWKFDAIDIMESALKGYKEASGTISGPGAYGKLKFESGIHRVQRV 178

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              + + R HTS  S+ + P   D +++++   D RIDTYR+ G+GGQ VNTTDSAVRIT
Sbjct: 179 PVTEKSGRVHTSAVSVAILPQ-ADEVDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRIT 237

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG VV  Q ERSQH+NKA+A  +LRA+LYE+E  +     +   S   +IG G    
Sbjct: 238 HVPTGTVVAIQDERSQHQNKAKALKVLRARLYEIERHRLHMDRSKLRSE--QIGSGDRSE 295

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
           +IR+Y   P   V D R  I   S  DV++G+ LD F+ A L
Sbjct: 296 RIRTYNF-PQGRVTDHRVGITHHSIEDVMEGESLDIFIDALL 336


>gi|218196470|gb|EEC78897.1| hypothetical protein OsI_19275 [Oryza sativa Indica Group]
 gi|222630945|gb|EEE63077.1| hypothetical protein OsJ_17885 [Oryza sativa Japonica Group]
          Length = 368

 Score =  182 bits (461), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 122/342 (35%), Positives = 185/342 (54%), Gaps = 15/342 (4%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA-L 77
             QR ++L  +   P    +  E     +E   L++ +  I+E++ +  +   L  L   
Sbjct: 20  IEQRSAYLQEQINQPD--ASPEEYSRANKELHKLESTMDMIEELRSKQEEIEGLKSLMTN 77

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQDW 133
             ++    +  +  L +   E +  Q +         EAD  D  LEV AG GG E+  +
Sbjct: 78  SVEEKDFREMAAQELLQALEEEKQLQHKLFRSLLPKDEADERDCILEVRAGTGGEEASLF 137

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  + +MY ++++K  +K +A++I +    G K A+  I GP AYG LK E G+HR+ R+
Sbjct: 138 AMDIFKMYEKYSQKNGWKFDAIDIMESALKGYKEASGTISGPGAYGKLKFESGIHRVQRV 197

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              + + R HTS  S+ + P   D +++++   D RIDTYR+ G+GGQ VNTTDSAVRIT
Sbjct: 198 PVTEKSGRVHTSAVSVAILPQ-ADEVDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRIT 256

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG VV  Q ERSQH+NKA+A  +LRA+LYE+E  +     +   S   +IG G    
Sbjct: 257 HVPTGTVVAIQDERSQHQNKAKALKVLRARLYEIERHRLHMDRSKLRSE--QIGSGDRSE 314

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
           +IR+Y   P   V D R  I   S  DV++G+ LD F+ A L
Sbjct: 315 RIRTYNF-PQGRVTDHRVGITHHSIEDVMEGESLDIFIDALL 355


>gi|39938500|ref|NP_950266.1| protein chain release factor A [Onion yellows phytoplasma OY-M]
 gi|81565140|sp|Q6YRK0|RF1_ONYPE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|39721609|dbj|BAD04099.1| protein chain release factor A [Onion yellows phytoplasma OY-M]
          Length = 351

 Score =  182 bits (461), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 99/347 (28%), Positives = 167/347 (48%), Gaps = 15/347 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D      Q+   L     +    QN+ +   +++    L+  +       +   +   
Sbjct: 1   MLDRLKIIKQKYQDLQKLLLNE---QNINQKIDILKNLSKLEPTVELFNRYLNLETEFTQ 57

Query: 72  LLELALEEDDCSILQETSDNLQRI----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           +  +   + D  +L         I    K  ++  +   L     D  +  LE+   +GG
Sbjct: 58  IQTILKTQQDQELLLLAHQEKDTILSEKKTTLDQLKILLLPQDPFDKKNVVLEIKGASGG 117

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  LLR Y ++AE +K+K E L ++   + G+ S  LLI G N Y +LK E GV
Sbjct: 118 NEANLFAADLLRTYVKYAESKKWKVEILNLNPSIKGGLSSVELLISGKNIYSFLKYESGV 177

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS + + V P  ++     I   D R DT+ +SG GGQ VNTT 
Sbjct: 178 HRVQRVPATEAQGRIHTSTAVVLVVPEAEELELK-IDWHDIRTDTFNSSGPGGQSVNTTK 236

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+THIP+G+ V CQ+ +SQH+NK +A+ +L+ ++Y   L  ++E  N     K  +G
Sbjct: 237 SAVRLTHIPSGISVACQEGKSQHENKDKAFTILKTRIYNQMLTAKQEEENKH--RKNLVG 294

Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            G +   IR+Y   P   + D R  +       +++G LD  ++  +
Sbjct: 295 TGERSEKIRTYNY-PQNRITDHRIGLTLQKLDIIMEGKLDLVIEPLI 340


>gi|48926665|gb|AAT47454.1| putative peptide chain release factor [Oryza sativa Japonica Group]
          Length = 350

 Score =  181 bits (460), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 122/342 (35%), Positives = 185/342 (54%), Gaps = 15/342 (4%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA-L 77
             QR ++L  +   P    +  E     +E   L++ +  I+E++ +  +   L  L   
Sbjct: 2   IEQRSAYLQEQINQPD--ASPEEYSRANKELHKLESTMDMIEELRSKQEEIEGLKSLMTN 59

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQDW 133
             ++    +  +  L +   E +  Q +         EAD  D  LEV AG GG E+  +
Sbjct: 60  SVEEKDFREMAAQELLQALEEEKQLQHKLFRSLLPKDEADERDCILEVRAGTGGEEASLF 119

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  + +MY ++++K  +K +A++I +    G K A+  I GP AYG LK E G+HR+ R+
Sbjct: 120 AMDIFKMYEKYSQKNGWKFDAIDIMESALKGYKEASGTISGPGAYGKLKFESGIHRVQRV 179

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              + + R HTS  S+ + P   D +++++   D RIDTYR+ G+GGQ VNTTDSAVRIT
Sbjct: 180 PVTEKSGRVHTSAVSVAILPQ-ADEVDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRIT 238

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+PTG VV  Q ERSQH+NKA+A  +LRA+LYE+E  +     +   S   +IG G    
Sbjct: 239 HVPTGTVVAIQDERSQHQNKAKALKVLRARLYEIERHRLHMDRSKLRSE--QIGSGDRSE 296

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
           +IR+Y   P   V D R  I   S  DV++G+ LD F+ A L
Sbjct: 297 RIRTYNF-PQGRVTDHRVGITHHSIEDVMEGESLDIFIDALL 337


>gi|291243180|ref|XP_002741481.1| PREDICTED: CG5705-like [Saccoglossus kowalevskii]
          Length = 411

 Score =  181 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 101/349 (28%), Positives = 174/349 (49%), Gaps = 15/349 (4%)

Query: 12  GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
            +F +         +              + K L R +  L   +  +K+ +++  +   
Sbjct: 44  RMF-FKKIKNEYDDIQKDLLSESASITGSKLKNLHRRKLELLPIVDLLKKWEEKNVELEE 102

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL-----SGEADSNDAYLEVHAGAG 126
           +  L  + +D  ++    +    +   +   + E          + D++D  +E+ AG G
Sbjct: 103 INILLQDSNDNEMISLAKEEKLEMMAAIRELEDEIFSLLVPKDEDDDTSDVLVEISAGVG 162

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E+  +A  +  MY R+A  ++++ + L++   +  GI+ AT+ + GP  Y ++K E G
Sbjct: 163 GQEAMLFAAEMFEMYQRYAHFQRWQFDVLDVGKSDIGGIRHATVSVSGPGVYSYMKYEGG 222

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +   R HTS  ++ V P     I+++I  SD +I+T RASGAGGQHVNTT
Sbjct: 223 VHRVQRVPKTEKQGRVHTSTMTVAVLP-QPREIDLQIKPSDLKIETKRASGAGGQHVNTT 281

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRI H+PTG+  +CQQERSQ KNKA A  +L  +LY  +L++++ I       K ++
Sbjct: 282 DSAVRIVHLPTGIAAECQQERSQIKNKAMAMKVLETRLYNKQLEEQQHIQRQS--RKLQV 339

Query: 307 ---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKAT 350
              G   +IR+Y       + D R      +    L G  DL+D +++ 
Sbjct: 340 GSSGRSEKIRTYNFN-QDRITDHRIGQHLHNIDGFLSGGDDLNDLIESL 387


>gi|307104974|gb|EFN53225.1| hypothetical protein CHLNCDRAFT_25946 [Chlorella variabilis]
          Length = 360

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 100/348 (28%), Positives = 180/348 (51%), Gaps = 16/348 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLIL 72
            +   +    L  +  DP +  N    + L+R    + +A+      K+++ +L D   L
Sbjct: 10  LEETEKSFKELQERMADPEVSGNNTGYQKLVRAVSDIQDAVDGYTAYKDLERQLADAKEL 69

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD--SNDAYLEVHAGAGGTES 130
           L+ +  + + + L        +  +E + ++ + LL  +      +  LEV AG GG E+
Sbjct: 70  LKESEGDPEMAELAREEMEALQAAIEQQGERLKYLLLPKDPLDEKNIMLEVRAGTGGEEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L+RMY ++A+ + +K   +     E  G K   L I G      LK E GVHR+
Sbjct: 130 ALWAADLIRMYQKYADTQGWKVSLMSESSAEAGGYKECVLQITGD---RQLKYESGVHRV 186

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +++ R HTS +++ + P   D + ++I   D  + T RA GAGGQ+VN  ++AV
Sbjct: 187 QRVPATETSGRVHTSTATVAIMP-EVDDVAVKIDPKDIALTTARAGGAGGQNVNKVETAV 245

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ + CQ+ER+Q +N+ +A  +LRAKL+ELEL+K+     I    K+++G G 
Sbjct: 246 DLMHKPTGIRIFCQEERTQGRNRERAMALLRAKLFELELEKQRSE--ISARRKSQVGTGS 303

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +I++Y  +    + D R+ I     + V++G LD+ ++  + + +
Sbjct: 304 RSEKIKTYNYKD-TRMSDHRSKI-NYDLNKVMEGALDECIQTMVMLDQ 349


>gi|294660260|ref|NP_852919.2| peptide chain release factor 1 [Mycoplasma gallisepticum str.
           R(low)]
 gi|46576715|sp|Q7NBX3|RF1_MYCGA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|284811917|gb|AAP56487.2| Peptide chain release factor 1 [Mycoplasma gallisepticum str.
           R(low)]
 gi|284930381|gb|ADC30320.1| Peptide chain release factor 1 [Mycoplasma gallisepticum str.
           R(high)]
          Length = 360

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 99/345 (28%), Positives = 163/345 (47%), Gaps = 14/345 (4%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
                   LN + E   L  +      + +E +     +   +     +   L   ++  
Sbjct: 13  AIRATAQKLNKELES--LTNDFKRIHAINKELKQKKQLLEVFELYDKLVVSGLEAEKIIN 70

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQDW 133
           +       +    +L   K ++   + +       +   D  +  +E+   AGG ES  +
Sbjct: 71  DNAMKEFHELAILDLDAAKEQIPDLEEKLKVLLLPADPNDDKEVIVEMRPAAGGDESSIF 130

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
              +  +Y  +  K  +K   +E+      G    +  I G + Y  +K E GVHR+ R+
Sbjct: 131 VGNMFDLYKEYCSKHNWKINVIEMLPTSV-GYSFISFEINGEDVYSKMKFESGVHRVQRV 189

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS  +I V P   D +EIEI+ +D RIDTYRASGAGGQHVN T+SAVRIT
Sbjct: 190 PATEAKGRVHTSTITIAVLPQ-QDDVEIEINPADLRIDTYRASGAGGQHVNRTESAVRIT 248

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           HIPTG+V  CQ+ +SQ  N+  A  MLR+KL+E   +++ +  +     K ++G G    
Sbjct: 249 HIPTGIVAACQEGKSQIANRETAMKMLRSKLWEAAEKEKNDALSAL--RKNQVGSGDRAE 306

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R N+   S    + G++D+ + A  + ++
Sbjct: 307 KIRTYNY-PQNRVTDHRINMSLNSLDRFMMGEIDEMIDALRSKEQ 350


>gi|284931146|gb|ADC31084.1| Peptide chain release factor 1 [Mycoplasma gallisepticum str. F]
          Length = 360

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 99/345 (28%), Positives = 163/345 (47%), Gaps = 14/345 (4%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
                   LN + E   L  +      + +E +     +   +     +   L   ++  
Sbjct: 13  AIRATAQKLNKELES--LTNDFKRIHAINKELKQKKQLLEVFELYDKLVVSGLEAEKIIN 70

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQDW 133
           +       +    +L   K ++   + +       +   D  +  +E+   AGG ES  +
Sbjct: 71  DNTMKEFHELAILDLDAAKEQIPDLEEKLKVLLLPADPNDDKEVIVEMRPAAGGDESSIF 130

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
              +  +Y  +  K  +K   +E+      G    +  I G + Y  +K E GVHR+ R+
Sbjct: 131 VGNMFDLYKEYCSKHNWKINVIEMLPTSV-GYSFISFEINGEDVYSKMKFESGVHRVQRV 189

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS  +I V P   D +EIEI+ +D RIDTYRASGAGGQHVN T+SAVRIT
Sbjct: 190 PATEAKGRVHTSTITIAVLPQ-QDDVEIEINPADLRIDTYRASGAGGQHVNRTESAVRIT 248

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           HIPTG+V  CQ+ +SQ  N+  A  MLR+KL+E   +++ +  +     K ++G G    
Sbjct: 249 HIPTGIVAACQEGKSQIANRETAMKMLRSKLWEAAEKEKNDALSAL--RKNQVGSGDRAE 306

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R N+   S    + G++D+ + A  + ++
Sbjct: 307 KIRTYNY-PQNRVTDHRINMSLNSLDRFMMGEIDEMIDALRSKEQ 350


>gi|326403021|ref|YP_004283102.1| peptide chain release factor 1 [Acidiphilium multivorum AIU301]
 gi|325049882|dbj|BAJ80220.1| peptide chain release factor 1 [Acidiphilium multivorum AIU301]
          Length = 352

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 105/346 (30%), Positives = 162/346 (46%), Gaps = 15/346 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA---ISFIKEIQDRLCDNLIL 72
            D  V R   L           +        RE   ++     I  ++  +    +    
Sbjct: 7   LDRIVLRAEELRAMLAAG---VDGERFVAASRELAEIEPVEQQILLLRAAERARDEAEAA 63

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
                  +      ++              +   L    AD   A LE+   AGG E+  
Sbjct: 64  RVDPELRELADAELDSLRETLPRLEH--EIRLALLPRDAADERPAILEIRPAAGGDEAAL 121

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L   Y R+A+ R ++ E L+  + E  G++     I G   +  LK E GVHR+ R
Sbjct: 122 FAAELFAAYRRYADLRGWRFEILDYTETELGGLREGIAEITGRAVFARLKFESGVHRVQR 181

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   ++  R HTS  ++ V P   + +++E++E+D RID +RASGAGGQHVN T+SAVRI
Sbjct: 182 VPATETQGRIHTSTVTVAVLP-EAEDVDVEVNEADLRIDVFRASGAGGQHVNKTESAVRI 240

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--- 309
           TH+PTG+VV  Q+ERSQHKN+A+A  +LRA+LY  E  +    A      K+++G G   
Sbjct: 241 THLPTGIVVAMQEERSQHKNRAKAMKILRARLY--EQTRAAAAAGRAADRKSQVGTGDRS 298

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +IR+Y   P   V D R N+       V+ G+ D+ + A     +
Sbjct: 299 ERIRTYNF-PQGRVTDHRINLTLHKIDRVMLGEFDEIIDALTEEDQ 343


>gi|85057288|ref|YP_456204.1| peptide chain release factor 1 [Aster yellows witches'-broom
           phytoplasma AYWB]
 gi|84789393|gb|ABC65125.1| bacterial peptide chain release factor 1 [Aster yellows
           witches'-broom phytoplasma AYWB]
          Length = 351

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 100/347 (28%), Positives = 168/347 (48%), Gaps = 15/347 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           + D      Q+   L     +    QN+ +   + +    L+  +       +   + + 
Sbjct: 1   MLDRLKKIKQKYQDLQKLLLNE---QNITQKIDIFKNLSKLEPTVELFNRYLNLETEFIQ 57

Query: 72  LLELALEEDDCSILQETSDNLQRI----KLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           +  +   E D  +L         I    K+ +E  +   L     D  +  LE+   AGG
Sbjct: 58  VQTILETEQDQELLLLARQEKDTILSKKKITLEKLKILLLPQDPFDKKNVVLEIKGAAGG 117

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
            E+  +A  LLR Y ++AE +K+K E L ++   + G+ S  LLI G N Y +LK E GV
Sbjct: 118 NEANLFAADLLRTYVKYAESKKWKVEILNLNPSIKGGLSSVELLISGKNIYSFLKYESGV 177

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS + + V+P  ++     I   D R DT+ +SG GGQ VNTT 
Sbjct: 178 HRVQRVPTTEAQGRIHTSTAVVLVFPEAEELELK-IDWHDIRTDTFNSSGPGGQSVNTTK 236

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVR+TH+P+G+ V CQ+ +SQH+NK +A+ +L+ ++Y   L  ++E        K  +G
Sbjct: 237 SAVRLTHVPSGISVACQEGKSQHENKDKAFTLLKTRIYNQMLNIKQEEEKTH--RKKLVG 294

Query: 308 WGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
            G +   IR+Y   P   + D R  +       +++G LD  ++  +
Sbjct: 295 TGERSEKIRTYNY-PQNRITDHRIGLTLQKLDIIMEGKLDLVIEPLI 340


>gi|189347853|ref|YP_001944382.1| peptide chain release factor 2 [Chlorobium limicola DSM 245]
 gi|189342000|gb|ACD91403.1| peptide chain release factor 2 [Chlorobium limicola DSM 245]
          Length = 249

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 128/246 (52%), Positives = 175/246 (71%), Gaps = 1/246 (0%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           +LSG+ D  +A + +HAGAGGTE+QDWA +L RMY RWAE++ FK    +  +G+ AGIK
Sbjct: 1   MLSGKDDPGNAIITIHAGAGGTEAQDWAEILYRMYMRWAERKGFKVYTDDYQEGDGAGIK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           +ATL I+G  AYG+LK E GVHRLVR+SP+DSN+RRHTSF+S++ YP     +EI++ + 
Sbjct: 61  TATLEIQGQYAYGYLKAENGVHRLVRVSPFDSNARRHTSFASVYTYPEAPPDVEIDVRKE 120

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D  + T+R+ G GGQ+VN  ++AVRI HIP+G+VV CQQERSQ +N+ +A  ML A+LY+
Sbjct: 121 DLELSTFRSGGKGGQNVNKVETAVRIKHIPSGIVVGCQQERSQFQNRERAMKMLMAQLYQ 180

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            + ++ E      E  K +I WG QIRSYVL   + +KD RTN E+     VLDGDLD F
Sbjct: 181 RQREEEEAKKREIEGKKKKIEWGSQIRSYVLDD-RRIKDHRTNYERFDIETVLDGDLDAF 239

Query: 347 MKATLA 352
           M+  L+
Sbjct: 240 MEKYLS 245


>gi|320533186|ref|ZP_08033906.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320134600|gb|EFW26828.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 340

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 109/326 (33%), Positives = 159/326 (48%), Gaps = 11/326 (3%)

Query: 37  QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK 96
            +    + L R    L   +S  +  Q    D   + ELA E++D +             
Sbjct: 4   ADPGAMRRLGRRYAELGRVVSAYRAWQAASADLADVRELAAEDEDFAAEVPAL-ETAEAA 62

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
                ++   +     D+ D  +EV AG GG ES  +A+ L RMY+R+AE++ +  E L+
Sbjct: 63  AGEHLREVL-VPRDPDDARDVIIEVKAGEGGEESALFASDLARMYSRYAERQGWAVEVLD 121

Query: 157 IHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
             D +  G K   L I            +  LK E GVHR+ R+   +S  R HTS + +
Sbjct: 122 ATDSDLGGYKDVRLAIKTRGPTEPQDGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGV 181

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  DD  E++I  +D RID +R+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ
Sbjct: 182 LVMPEADDPGELQIDAADLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSMQNEKSQ 241

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRT 328
            +NK  A  +LRA+L           A     S+   +    +IR+Y   P   + D RT
Sbjct: 242 LQNKEAAMRVLRARLLAERAAAAAAEAAQARRSQVRTVDRSERIRTYNF-PENRIADHRT 300

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIK 354
             +  +   VLDGDL   + + +A+ 
Sbjct: 301 GFKAYNLDAVLDGDLGPVIASAIAMD 326


>gi|225437801|ref|XP_002274067.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297744098|emb|CBI37068.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 118/350 (33%), Positives = 180/350 (51%), Gaps = 18/350 (5%)

Query: 19  AVQRLSFLNTKTE-DPHLWQNVI----EAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
             QRLS +  ++               E     +E + L ++I  I E++++  +   L 
Sbjct: 28  MEQRLSAIEHRSAYLQDFINRPEASPVEYARANKELRKLRSSIEHITELRNKQKEIDGLK 87

Query: 74  ELALEEDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
            L  E  +   +   +        +  K          L   EAD  D  LEV AG GG 
Sbjct: 88  SLMAECSEDKDMLNMAAEELGQAAEEEKRLQNLLLKSLLPKDEADERDCILEVRAGTGGE 147

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  + +MY ++++K  +K E ++I + +  G K A+  I G   YG LK E G+H
Sbjct: 148 EASLFAMDIFKMYEKYSQKNGWKFEVVDITESDLKGYKEASGAISGSGVYGKLKFESGIH 207

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   + + R HTS  S+ + P   D +++++   D RIDTYR+ G+GGQH NTT+S
Sbjct: 208 RVQRVPVTEKSGRVHTSAVSVAILPQ-ADEVDVQLRNEDLRIDTYRSGGSGGQHANTTNS 266

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVRITHIP+G+ V  Q ERSQH NKA+A  +L AKLYE+E  + ++  +       +IG 
Sbjct: 267 AVRITHIPSGMTVAIQDERSQHMNKAKALKVLCAKLYEIERSRIQKDRSKLRME--QIGS 324

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354
           G    +IR+Y   P   V D R  I   S +DV+ G+ LD F+ A L  +
Sbjct: 325 GDRSERIRTYNF-PQGRVTDHRVGITHHSVNDVMQGENLDVFIDALLLQQ 373


>gi|296393116|ref|YP_003658000.1| peptide subunit release factor 1 [Segniliparus rotundus DSM 44985]
 gi|296180263|gb|ADG97169.1| peptide chain release factor 1 [Segniliparus rotundus DSM 44985]
          Length = 354

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 117/346 (33%), Positives = 173/346 (50%), Gaps = 15/346 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               +     L  +  DP L  +V  AK + +    L        + ++    +L     
Sbjct: 5   LPELIAEYESLQKRWADPSLQDDVSAAKKIGKRVAELGPVYEAHTQ-REAARADLAAAHE 63

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
             E D     +E      RI                 D +D  LEV +GAGG ES  +A 
Sbjct: 64  LAELDPEFGREEVERLTGRIHELDAALAELLAPRDPHDGDDVVLEVKSGAGGEESALFAG 123

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG--------PNAYGWLKGEQGV 187
            L+RMYT++AE+R+++ E L + + +  G+K AT+ IK            + WLK E GV
Sbjct: 124 DLMRMYTKFAERRRWRVEVLSMAESDLGGVKDATISIKRTGGDQSPANGVWAWLKHEGGV 183

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   +S  R HTS + +  YP  +D+ +I I E++ RID YR+SG GGQ VNTTD
Sbjct: 184 HRVQRVPATESQGRIHTSAAGVLAYPEPEDAPDIVIDETELRIDVYRSSGKGGQGVNTTD 243

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI- 306
           SAVRITH+PTG+VV CQ ERSQ +NKA+A  +L A+L +L  ++ +  A      K +I 
Sbjct: 244 SAVRITHLPTGLVVTCQNERSQLQNKARAMVVLAARLEQL--REEKAAAEAASGRKEQIR 301

Query: 307 --GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
                 +IR+Y   P   + D R   +  +   VL+GDL+  +   
Sbjct: 302 TVDRSERIRTYNF-PENRITDHRIGYKANNLDMVLEGDLEAMLSEL 346


>gi|260220347|emb|CBA27793.1| Peptide chain release factor 1 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 329

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 108/265 (40%), Positives = 147/265 (55%), Gaps = 14/265 (5%)

Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
             Q   L     D+  A++E+ AG GG ES  +A  L RMYTR+ + +  +TE +   + 
Sbjct: 55  ELQRMLLPKDPDDARPAFVEIRAGTGGDESALFAVDLARMYTRYCDAKGLRTEIMSASES 114

Query: 161 EEAGIKSATLLIK--------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E  G K   L I+           AYG LK E G HR+ R+   ++  R HTS  +I V 
Sbjct: 115 ELGGYKEVVLRIEGSTTTSAGSCGAYGMLKFESGGHRVQRVPATETQGRIHTSACTIAVL 174

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
              D++  I+I+ SD RIDTYRASGAGGQH+N TDSAVRITHIPTG+V +CQ  RSQH N
Sbjct: 175 AEQDEAEAIKINPSDLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVAECQDGRSQHSN 234

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTN 329
           KAQA  +L A++   E  + E  A      K+ +G G    +IR+Y   P   + D R N
Sbjct: 235 KAQALKVLTARI--HEKDRSERAAKDAAERKSLVGSGDRSDRIRTYNY-PQGRLTDHRIN 291

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +        ++GDLDD ++A  A +
Sbjct: 292 LTLYKLDRAMEGDLDDVIEALQAYE 316


>gi|326771965|ref|ZP_08231250.1| peptide chain release factor 1 [Actinomyces viscosus C505]
 gi|326638098|gb|EGE38999.1| peptide chain release factor 1 [Actinomyces viscosus C505]
          Length = 364

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 165/346 (47%), Gaps = 12/346 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +  +   + +  +   P         + L R    L   ++  +  Q    D     ELA
Sbjct: 9   EPLLAEYADIEAEMAGPAAAD-PGAMRRLGRRYAELGRVVAAYRAWQSASADLADARELA 67

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
            E++D +      +  +    E   +    +     DS D  +EV AG GG ES  +A+ 
Sbjct: 68  AEDEDFAAEVPALEAAEAAAGEHLREVL--VPRDPDDSRDVIIEVKAGEGGEESALFASD 125

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHR 189
           L RMY+R+AE++ +  E L+  D +  G K   L I            +  LK E GVHR
Sbjct: 126 LARMYSRYAERQGWAVEVLDATDSDLGGYKDVRLAIKARGPVEPQDGVWAHLKYEGGVHR 185

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS + + V P  DD  E++I  +D RID +R+SG GGQ VNTTDSA
Sbjct: 186 VQRVPVTESQGRIHTSAAGVLVMPEADDPGELQIDAADLRIDVFRSSGPGGQSVNTTDSA 245

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308
           VRITH+PTG+VV  Q E+SQ +NK  A  +LRA+L           A     S+   +  
Sbjct: 246 VRITHLPTGIVVSMQNEKSQLQNKEAAMRVLRARLLAERAAAAAAEAAQARRSQVRTVDR 305

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +IR+Y   P   + D RT  +  +   VLDGDL   + + +A+ 
Sbjct: 306 SERIRTYNF-PENRIADHRTGFKAYNLDAVLDGDLGPVIASAIAMD 350


>gi|297183483|gb|ADI19614.1| protein chain release factor a [uncultured SAR11 cluster bacterium
           HF0770_37D02]
          Length = 358

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 111/334 (33%), Positives = 176/334 (52%), Gaps = 14/334 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + V     L  +    ++  +  +     +E   ++  I+  +   D   +   L ++
Sbjct: 7   VKSIVNTYKTLEKELASGNI--DKKDFVKKSKEYSSIEEVINEARGYIDFGKEKKELEKI 64

Query: 76  ALEEDDCSILQETSDNLQRIK-----LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E+D    + + ++N             +  +   L   EAD+ +A LE+ AG GG E+
Sbjct: 65  IDEKDGDKEMIKLAENELIQLSKKKSEYEQKLKIYLLPKDEADAKNAILEIRAGTGGLEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +   L +MY +   K+K+  E + I   E  G K   LLIKG N Y +LK E GVHR+
Sbjct: 125 TLFVADLYKMYEKVCLKKKWLLEIINISKSEAGGFKEVILLIKGNNIYSFLKFESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++I+I+E D RID +R+SG GGQ VNTTDSAV
Sbjct: 185 QRVPKTETQGRVHTSAATVAVLP-EAEEVDIKINEKDLRIDVFRSSGPGGQSVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+P+GVVV  Q E+SQHKN+A+A  +LR+++YE E +K+++        K +IG G 
Sbjct: 244 RITHLPSGVVVSQQDEKSQHKNRAKAMKILRSRVYENEREKKDKER--SRDRKNQIGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
              +IR+Y   P   V D R N+      + L+G
Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLHKLEEFLNG 334


>gi|313606725|gb|EFR83443.1| peptide chain release factor 1 [Listeria monocytogenes FSL F2-208]
          Length = 309

 Score =  180 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 99/302 (32%), Positives = 166/302 (54%), Gaps = 8/302 (2%)

Query: 58  FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSND 116
             K + +++ +   LL   L+++   + +E    LQ+ K ++E + +   +     D  +
Sbjct: 1   EYKNVNEQINETKELLGEKLDDEMREMAKEEFAELQKEKADLEERLKLLLVPKDPNDDKN 60

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             LE+   AGG E+  +A  L RMY+++AE R +K E ++ +     G K    ++ G +
Sbjct: 61  VILEIRGAAGGDEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGND 120

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A+  +K E G HR+ R+   +S  R HTS +++ + P   + +EIE+ + D R DT+ ++
Sbjct: 121 AFSRMKYENGAHRVQRVPETESGGRIHTSTATVAILP-EAEEVEIELHDKDIRTDTFAST 179

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQ VNTT SAVR+THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+    +RE   
Sbjct: 180 GAGGQSVNTTMSAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKF--EREARE 237

Query: 297 NIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
               + K+ +G G    +IR+Y   P   V D R  +       +++G LD+ + A +  
Sbjct: 238 EYDANRKSAVGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILE 296

Query: 354 KK 355
            +
Sbjct: 297 DQ 298


>gi|149038509|gb|EDL92839.1| rCG41113 [Rattus norvegicus]
          Length = 384

 Score =  180 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 111/305 (36%), Positives = 158/305 (51%), Gaps = 9/305 (2%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            L  A   + E +  L D   LL    E+       E +   + I           + S 
Sbjct: 67  QLAAAARLLNEKERELRDTESLLHDENEDLKKLAESEIALCQKEIAELKHRIISLLVPSE 126

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           + D +D  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+ 
Sbjct: 127 DMDGSDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSELGGLRHASA 186

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I GP AY  +K E GVHR+ R+   +   R HTS  ++ + P     I++ I+  D RI
Sbjct: 187 SIGGPEAYRHMKFEGGVHRVQRVPKTERQGRIHTSTMTVAILP-QPTEIKLVINPKDLRI 245

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT RASGAGGQHVNTTDSAVRI H+PTG++ +CQQERSQ KN+  A   LRA+LY + L+
Sbjct: 246 DTKRASGAGGQHVNTTDSAVRIVHLPTGIISECQQERSQLKNRELAMKKLRARLYSMRLE 305

Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345
             EE A    + K ++   G   +IR+Y   P   V D R N         + GD  LDD
Sbjct: 306 --EETAKRYSARKIQVGTKGRSEKIRTYNF-PQNRVTDHRINKSLHDLESFMQGDCLLDD 362

Query: 346 FMKAT 350
            +++ 
Sbjct: 363 LIQSL 367


>gi|28493402|ref|NP_787563.1| peptide chain release factor RF-1 [Tropheryma whipplei str. Twist]
 gi|28572487|ref|NP_789267.1| peptide chain release factor 1 [Tropheryma whipplei TW08/27]
 gi|28410619|emb|CAD67005.1| peptide chain release factor 1 [Tropheryma whipplei TW08/27]
 gi|28476443|gb|AAO44532.1| peptide chain release factor RF-1 [Tropheryma whipplei str. Twist]
          Length = 347

 Score =  180 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 109/351 (31%), Positives = 163/351 (46%), Gaps = 16/351 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  D  ++  S +  +        +  E K L      L    +  +E Q    D   
Sbjct: 1   MFETIDTLLREHSIIEDRLSRCD--ASPSEMKDLSLRYSKLSRVKAAYEEFQKISLDLSA 58

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             ELA ++    +                          E D  D  +E+  G GG ES 
Sbjct: 59  ARELADDDPGFLVEIPVLTEKLSDAQARLQSLL--TRRDENDHRDVIMEIKGGEGGAESA 116

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQG 186
            +A  LLRMY  +A+   +K E L   +    G K   L I+         +  LK E G
Sbjct: 117 LFAADLLRMYAYFADSNGWKVEILSYSENTLGGYKDVQLAIRKTPSSTHGVWELLKYEGG 176

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS + + V+P VD   EIEI+  + RID +R+SG GGQ VNTT
Sbjct: 177 VHRVQRVPATESQGRIHTSTTGVLVFPEVDAPGEIEITNDEIRIDVFRSSGPGGQSVNTT 236

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVRITH+PTG+VV CQ E+SQ +N+  A  +LRA+L  +  ++ E       + K++I
Sbjct: 237 DSAVRITHLPTGIVVSCQNEKSQIQNRESAMRILRARL--IAKRQDEIEKTTHAARKSQI 294

Query: 307 ---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                  +IR+Y   P   V D RT  +  +   VL+GD+   +++ +   
Sbjct: 295 RAMDRSERIRTYNF-PENRVVDHRTGYKAYNLDQVLNGDVSQLIRSCIEAD 344


>gi|30425080|ref|NP_780583.1| peptide chain release factor 1-like, mitochondrial precursor [Mus
           musculus]
 gi|81874010|sp|Q8BJU9|RF1ML_MOUSE RecName: Full=Peptide chain release factor 1-like, mitochondrial;
           AltName: Full=Mitochondrial translational release factor
           1-like; Flags: Precursor
 gi|26347595|dbj|BAC37446.1| unnamed protein product [Mus musculus]
 gi|74186873|dbj|BAE20502.1| unnamed protein product [Mus musculus]
 gi|148671619|gb|EDL03566.1| mitochondrial translational release factor 1-like [Mus musculus]
          Length = 373

 Score =  179 bits (455), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 111/305 (36%), Positives = 159/305 (52%), Gaps = 9/305 (2%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            L  A   + E +  L D   LL    E+       E +   ++I           + S 
Sbjct: 56  QLAAAARLLSEKERELRDTESLLHDENEDLKKLAESEIALCQKQITELKHQIISLLVPSE 115

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D +D  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+ 
Sbjct: 116 EMDGSDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSELGGLRHASA 175

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            + GP AY  +K E GVHR+ R+   +   R HTS  ++ + P     I++ I+  D RI
Sbjct: 176 SVGGPEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILP-QPTEIKLVINPKDLRI 234

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT RASGAGGQHVNTTDSAVRI H+PTG++ +CQQERSQ KN+  A   LRA+LY + L+
Sbjct: 235 DTKRASGAGGQHVNTTDSAVRIVHLPTGIISECQQERSQLKNRELAMKKLRARLYSMHLE 294

Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345
             EE A    + K ++   G   +IR+Y   P   V D R N         + GD  LDD
Sbjct: 295 --EETAKRYNARKIQVGTKGRSEKIRTYNF-PQNRVTDHRINKSLHDLESFMQGDCLLDD 351

Query: 346 FMKAT 350
            +++ 
Sbjct: 352 MIQSL 356


>gi|126311212|ref|XP_001381267.1| PREDICTED: similar to Mitochondrial translational release factor
           1-like [Monodelphis domestica]
          Length = 567

 Score =  179 bits (455), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 111/305 (36%), Positives = 156/305 (51%), Gaps = 9/305 (2%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            L  A   ++E +  L +   LLE   E+       E     + +    +      + S 
Sbjct: 66  ELAMAARKLREKEQELQEIERLLEDENEDLRKLAENEIISCQKELTKLKQKIILLLIPSE 125

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D ND  LE+ AG GG E+  +   +  MY R+A  +K+  E LE    E  G++ A+ 
Sbjct: 126 ETDENDLILELTAGVGGQEAMLFTAEMFDMYQRYATYKKWHFEILEYFPSEIGGLRHASA 185

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I GP AY  +K E GVHR+ R+   +   R HTS  ++ + P     I + I+  + RI
Sbjct: 186 SIGGPEAYRHMKFEGGVHRVQRVPKTEKQGRMHTSTMTVAILP-QPTEINLVINPKELRI 244

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           +T RASGAGGQHVNTTDSAVRI H+PTGV  +CQQERSQ KNK  A   LRAKLY + L+
Sbjct: 245 ETKRASGAGGQHVNTTDSAVRIVHLPTGVATECQQERSQIKNKEMAMKKLRAKLYSMLLE 304

Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345
             EE      + K +I   G   +IR+Y   P   V D R +         + G+  LD+
Sbjct: 305 --EETNKRYSARKIQIGTKGRSEKIRTYHF-PQNRVTDHRISKSLYDIQSFMLGEYLLDE 361

Query: 346 FMKAT 350
            +++ 
Sbjct: 362 LIQSL 366


>gi|296199479|ref|XP_002747187.1| PREDICTED: peptide chain release factor 1-like, mitochondrial
           [Callithrix jacchus]
          Length = 382

 Score =  179 bits (455), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 113/305 (37%), Positives = 155/305 (50%), Gaps = 9/305 (2%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            L   +  + E +  L +   LL    E+       E +   + I           + S 
Sbjct: 63  ELVAVVKLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D ND  LEV AG GG E+  + + +  MY R+A  +++  E LE    E  G++ A+ 
Sbjct: 123 ETDENDLILEVTAGVGGQEAMLFTSEMFDMYQRYAAFKRWHFETLEYFPSEIGGLRHASA 182

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P     I + I+  D RI
Sbjct: 183 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILP-QPTEINLVINPKDLRI 241

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  A   LRAKLY + L+
Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMKKLRAKLYSMHLE 301

Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345
             EE      + K +I   G   +IR+Y   P   V D R +         + GD  LD+
Sbjct: 302 --EETNKRDNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRISKSLHDLQTFMQGDYLLDE 358

Query: 346 FMKAT 350
            +++ 
Sbjct: 359 LVQSL 363


>gi|219119372|ref|XP_002180448.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217407921|gb|EEC47856.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 358

 Score =  179 bits (455), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 96/348 (27%), Positives = 169/348 (48%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +    L  +  DP +  +    + +M +R  ++  +   +E      +     EL
Sbjct: 5   LDGIRRSYQALTERLADPDVINDSNLLRQVMTDRSQIEEVVMVFEEYVALQEELSGAKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +  D   ++E + +  +          E  +   L     D+ +  LE+ AG GG+E+
Sbjct: 65  FQDAGDDPDMKEMARDEMKAIEPQLDSLEEKIKVLLLPKDPNDARNVMLEIRAGTGGSEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL +Y ++   + +++  ++   G++ G K+  L IKG   Y  LK E GVHR+
Sbjct: 125 NIFAGDLLDVYRKYISTQGWQSNLIDSSSGDDGGYKNVVLDIKGDMVYSKLKWEAGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ + P  D+ ++I+I   +  + T R+ GAGGQ+VN  ++AV
Sbjct: 185 QRVPATESQGRVHTSTATVAIMPECDE-VDIKIDPKEIEMSTMRSGGAGGQNVNKVETAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ ++C QERSQ KNK  A  ML AKLY++E +KRE          +++G G 
Sbjct: 244 DLLHKPTGIRIKCTQERSQLKNKELAMKMLMAKLYDMENEKREMEERARRG--SQVGTGG 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R   +    +  L GD+     + +A  +
Sbjct: 302 RSEKIRTYNWKD-SRCSDHRLG-QNFPLAQFLSGDIGSMHDSMIAKDQ 347


>gi|68171151|ref|ZP_00544559.1| Peptide chain release factor 2 [Ehrlichia chaffeensis str. Sapulpa]
 gi|67999421|gb|EAM86062.1| Peptide chain release factor 2 [Ehrlichia chaffeensis str. Sapulpa]
          Length = 221

 Score =  179 bits (455), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 130/217 (59%), Positives = 167/217 (76%), Gaps = 1/217 (0%)

Query: 136 MLLRMYTRWAE-KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           ML RMY RWAE    FKTE +   DGEE G+KSAT+ + G NAYGW K E G+HRLVRIS
Sbjct: 1   MLFRMYVRWAEIYHNFKTEIVHKLDGEEVGVKSATIKVIGDNAYGWAKTESGIHRLVRIS 60

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P++SN++RHT+FSSI V PV+++   IEI + D RIDTYRASGAGGQHVN T+SAVRITH
Sbjct: 61  PFNSNAKRHTTFSSILVSPVINEDTNIEILDKDLRIDTYRASGAGGQHVNKTESAVRITH 120

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           IP+G+VVQCQ  RSQH+N A+A N+L+++LY+L+LQ++E+      + +  IGWG QIRS
Sbjct: 121 IPSGIVVQCQNNRSQHQNLAEAHNLLKSRLYQLKLQEKEKKMAEEHNKRCNIGWGNQIRS 180

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           YV+ PYQMVKD+RT  E  + + VLDG+LD F+ + L
Sbjct: 181 YVMHPYQMVKDIRTGHEIGNVNSVLDGNLDSFIISAL 217


>gi|223997436|ref|XP_002288391.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975499|gb|EED93827.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 366

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 94/348 (27%), Positives = 164/348 (47%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   +    L  +  DP +  +    + +M++R   +  +    E      +     EL
Sbjct: 11  LDGIRRSFQALTERLADPDVIADSNLLRQVMKDRSQSEETVQAFDEYCQLETELEGAQEL 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEY-----KQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E  D   ++E + +  +             +   L     D  +  LE+ AG GG+E+
Sbjct: 71  FQEAGDDVEMREMARSEMKEIEVRLDELETLIKILLLPKDPNDDRNCMLEIRAGTGGSEA 130

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LL +Y ++     ++   ++   G++ G K+  L +KG + Y  LK E GVHR+
Sbjct: 131 NIFAGDLLDVYRKFMSAEGWQVSMMDSSPGDDGGYKNVVLEVKGDSVYSKLKWEAGVHRV 190

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ + P  D+ ++++I   D  + T R+ GAGGQ+VN  ++AV
Sbjct: 191 QRVPATETQGRVHTSTATVAIMPECDE-VDVKIDPKDIEMSTMRSGGAGGQNVNKVETAV 249

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ ++C QERSQ KNK  A  ML A+LY++E +KRE           +IG G 
Sbjct: 250 DLLHKPTGIRIKCTQERSQLKNKELAMKMLMARLYDIENEKREAEERERRG--VQIGTGG 307

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +    V D R   +     + L GD+   +   +   +
Sbjct: 308 RSEKIRTYNWKD-SRVSDHRLG-QNFPLQNFLSGDVGPIIDGLIIKDQ 353


>gi|15080204|gb|AAH11873.1| Mitochondrial translational release factor 1-like [Homo sapiens]
 gi|119568097|gb|EAW47712.1| mitochondrial translational release factor 1-like, isoform CRA_a
           [Homo sapiens]
 gi|119568101|gb|EAW47716.1| mitochondrial translational release factor 1-like, isoform CRA_a
           [Homo sapiens]
 gi|312151704|gb|ADQ32364.1| mitochondrial translational release factor 1-like [synthetic
           construct]
          Length = 380

 Score =  179 bits (454), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 115/305 (37%), Positives = 156/305 (51%), Gaps = 9/305 (2%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            L   I  + E +  L +   LL    E+       E +   + I           + S 
Sbjct: 63  ELLAVIKLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+ 
Sbjct: 123 ETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASA 182

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P     I + I+  D RI
Sbjct: 183 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILP-QPTEINLVINPKDLRI 241

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  A   LRAKLY + L+
Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLE 301

Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345
             EEI     + K +I   G   +IR+Y   P   V D R N         + GD  LD+
Sbjct: 302 --EEINKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLLDE 358

Query: 346 FMKAT 350
            +++ 
Sbjct: 359 LVQSL 363


>gi|293977889|ref|YP_003543319.1| bacterial peptide chain release factor 2 [Candidatus Sulcia
           muelleri DMIN]
 gi|292667820|gb|ADE35455.1| bacterial peptide chain release factor 2 (bRF-2) [Candidatus Sulcia
           muelleri DMIN]
          Length = 345

 Score =  179 bits (454), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 124/351 (35%), Positives = 207/351 (58%), Gaps = 17/351 (4%)

Query: 2   KLSRQLNCLGGLFDWDNA-VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           K+S +L  +    + +     RL       E  +  + + ++  L  +++     +++  
Sbjct: 9   KISIKLKEIYYYLNIEQKYRSRLEK-----ESHNFCKKIKKSNTLFFKKKQ---ILNYFY 60

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            I+  L +  ILLE     +   +  +   N   I+      +F     G+ D+ +A L+
Sbjct: 61  SIKVLLNELKILLEFFPYGEVTELEIDFIYNK--IEKFFSKIEFTKFFFGKEDNLNAVLQ 118

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + AGAGGTES DWA+ML RMY  WAEK  FK + +    G+  G++S T ++KG + +G+
Sbjct: 119 ISAGAGGTESCDWASMLYRMYIMWAEKHNFKIKKINSLQGDIIGLRSITFIVKGLSPFGY 178

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           LKGE GVHRLVRISP+D++ R HTSF+S+++YP++DD I I+I+ SD   +T+R+ G+GG
Sbjct: 179 LKGENGVHRLVRISPFDNSKR-HTSFASVYIYPLIDDDINIKINTSDISWNTFRSRGSGG 237

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN  +S VR+ H PT ++++  + +SQ  NK +A  +L+++L+ +E     + +    
Sbjct: 238 QNVNKVESGVRLHHHPTNIIIENSETKSQFNNKIKALKLLKSRLFYIE-----KKSKNTT 292

Query: 301 SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             K +I W  QIR+Y++ PY++VKDLRT  E +    VL+G++D F+K  L
Sbjct: 293 CIKKKIEWSSQIRNYIMHPYKLVKDLRTGYETSDIESVLNGEIDIFLKKNL 343


>gi|329945388|ref|ZP_08293151.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 170 str.
           F0386]
 gi|328529010|gb|EGF55941.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 170 str.
           F0386]
          Length = 364

 Score =  179 bits (454), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 166/346 (47%), Gaps = 12/346 (3%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +  +   + +  +   P         + L R    L   ++  +  Q    D     ELA
Sbjct: 9   EPLLAEYADIEAEMAGPAAAD-PGAMRRLGRRYAELGRVVAAYRAWQSASTDLADARELA 67

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
            E++D +    T +  +    E   +    +     D+ D  +EV AG GG ES  +A+ 
Sbjct: 68  AEDEDFAAEVPTLEAAEAAAGEHLREVL--VPRDPDDARDVIIEVKAGEGGEESALFASD 125

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVHR 189
           L RMY+R+AE++ +  E L+  D +  G K   L I            +  LK E GVHR
Sbjct: 126 LARMYSRYAERQGWAVEVLDATDSDLGGYKDVRLAIKTRGPVEPQNGVWAHLKYEGGVHR 185

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS + + V P  DD  E++I  +D RID +R+SG GGQ VNTTDSA
Sbjct: 186 VQRVPVTESQGRIHTSAAGVLVMPEADDPGELQIDAADLRIDVFRSSGPGGQSVNTTDSA 245

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGW 308
           VRITH+PTG+VV  Q E+SQ +NK  A  +LRA+L           A     S+   +  
Sbjct: 246 VRITHLPTGIVVSMQNEKSQLQNKEAAMRVLRARLLAERAAAVAAEAAQARRSQVRTVDR 305

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +IR+Y   P   + D RT  +  +   VLDGDL   + + +A+ 
Sbjct: 306 SERIRTYNF-PENRIADHRTGFKAYNLDAVLDGDLGPVIASAIAMD 350


>gi|332213665|ref|XP_003255945.1| PREDICTED: peptide chain release factor 1-like, mitochondrial
           isoform 1 [Nomascus leucogenys]
          Length = 380

 Score =  179 bits (454), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 114/305 (37%), Positives = 155/305 (50%), Gaps = 9/305 (2%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            L   I  + E +  L +   LL    E+       E +   + I           + S 
Sbjct: 63  ELLAVIKLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+ 
Sbjct: 123 ETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASA 182

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P     I + I+  D RI
Sbjct: 183 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILP-QPTEINLVINPKDLRI 241

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  A   LRAKLY + L+
Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLE 301

Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345
             EE      + K +I   G   +IR+Y   P   V D R N         + GD  LD+
Sbjct: 302 --EETNKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINRTLHDLETFMQGDYLLDE 358

Query: 346 FMKAT 350
            +++ 
Sbjct: 359 LVQSL 363


>gi|152965225|ref|YP_001361009.1| peptide chain release factor 1 [Kineococcus radiotolerans SRS30216]
 gi|189039977|sp|A6W7F6|RF1_KINRD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|151359742|gb|ABS02745.1| peptide chain release factor 1 [Kineococcus radiotolerans SRS30216]
          Length = 355

 Score =  179 bits (453), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 107/349 (30%), Positives = 168/349 (48%), Gaps = 11/349 (3%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+     +   + L  +  DP +  +   A+ L R    L   +        R   +  
Sbjct: 1   MFEAVTPLLDEHAELERRLADPAVHADAALARTLGRRYAELGAVVVA--HAAWRAAADDA 58

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
                L  +D +   E     +  +   E  +   L     DS D  LE+ AG GG ES 
Sbjct: 59  EAARELAAEDAAFAAELPALQRAAEEAGEKLRRLLLPRDPDDSRDVILEIKAGEGGEESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG-----PNAYGWLKGEQG 186
            +A  LLRMY R+AE+  + TE L+ +  +  G K  ++ +K         +  LK E G
Sbjct: 119 LFAGDLLRMYLRYAERHGWVTEVLDANPSDLGGYKDVSVAVKTRGAAAEGVWHRLKYEGG 178

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +S  R HTS     +     + +E+ +  +D R+D +R+SG GGQ VNTT
Sbjct: 179 VHRVQRVPVTESQGRVHTSAV-GVLVVPEAEEVEVAVDPNDLRVDVFRSSGPGGQSVNTT 237

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE- 305
           DSAVRITH+PTGVV  CQ E+SQ +N+ QA  +LRA+L+ L  +  +  A+    S+   
Sbjct: 238 DSAVRITHLPTGVVATCQNEKSQLQNREQAMRILRARLHALAQEAADAQASAARRSQVRT 297

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +    ++R+Y       + D RT  +  +   VLDGDLD  +++ +   
Sbjct: 298 VDRSERVRTYNYG-ENRIADHRTGFKAYNLDTVLDGDLDPVIQSAIDAD 345


>gi|166795303|ref|NP_061914.3| peptide chain release factor 1-like, mitochondrial isoform a [Homo
           sapiens]
 gi|74753314|sp|Q9UGC7|RF1ML_HUMAN RecName: Full=Peptide chain release factor 1-like, mitochondrial;
           AltName: Full=Mitochondrial translational release factor
           1-like; AltName: Full=mtRF1a; Flags: Precursor
 gi|6706658|emb|CAB65994.1| mitochondrial translational release factor 1-like [Homo sapiens]
 gi|158254756|dbj|BAF83351.1| unnamed protein product [Homo sapiens]
          Length = 380

 Score =  178 bits (452), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 115/305 (37%), Positives = 156/305 (51%), Gaps = 9/305 (2%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            L   I  + E +  L +   LL    E+       E +   + I           + S 
Sbjct: 63  ELLAVIKLLNEKERELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+ 
Sbjct: 123 ETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASA 182

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P     I + I+  D RI
Sbjct: 183 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILP-QPTEINLVINPKDLRI 241

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  A   LRAKLY + L+
Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLE 301

Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345
             EEI     + K +I   G   +IR+Y   P   V D R N         + GD  LD+
Sbjct: 302 --EEINKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLLDE 358

Query: 346 FMKAT 350
            +++ 
Sbjct: 359 LVQSL 363


>gi|297679452|ref|XP_002817544.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           isoform 1 [Pongo abelii]
          Length = 380

 Score =  178 bits (452), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 114/305 (37%), Positives = 155/305 (50%), Gaps = 9/305 (2%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            L   I  + E +  L +   LL    E+       E +   + I           + S 
Sbjct: 63  ELLAVIKLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+ 
Sbjct: 123 ETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRQASA 182

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P     I + I+  D RI
Sbjct: 183 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILP-QPTEINLVINPKDLRI 241

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  A   LRAKLY + L+
Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLE 301

Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345
             EE      + K +I   G   +IR+Y   P   V D R N         + GD  LD+
Sbjct: 302 --EETNKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKTLHDLETFMRGDYLLDE 358

Query: 346 FMKAT 350
            +++ 
Sbjct: 359 LVQSL 363


>gi|71043904|ref|NP_001020894.1| peptide chain release factor 1-like, mitochondrial precursor
           [Rattus norvegicus]
 gi|81907899|sp|Q4V7E5|RF1ML_RAT RecName: Full=Peptide chain release factor 1-like, mitochondrial;
           AltName: Full=Mitochondrial translational release factor
           1-like; Flags: Precursor
 gi|66910900|gb|AAH97970.1| Mitochondrial translational release factor 1-like [Rattus
           norvegicus]
          Length = 373

 Score =  178 bits (452), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 111/305 (36%), Positives = 158/305 (51%), Gaps = 9/305 (2%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            L  A   + E +  L D   LL    E+       E +   + I           + S 
Sbjct: 56  QLAAAARLLNEKERELRDTESLLHDENEDLKKLAESEIALCQKEIAELKHRIISLLVPSE 115

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           + D +D  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+ 
Sbjct: 116 DMDGSDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSELGGLRHASA 175

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I GP AY  +K E GVHR+ R+   +   R HTS  ++ + P     I++ I+  D RI
Sbjct: 176 SIGGPEAYRHMKFEGGVHRVQRVPKTERQGRIHTSTMTVAILP-QPTEIKLVINPKDLRI 234

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT RASGAGGQHVNTTDSAVRI H+PTG++ +CQQERSQ KN+  A   LRA+LY + L+
Sbjct: 235 DTKRASGAGGQHVNTTDSAVRIVHLPTGIISECQQERSQLKNRELAMKKLRARLYSMRLE 294

Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345
             EE A    + K ++   G   +IR+Y   P   V D R N         + GD  LDD
Sbjct: 295 --EETAKRYSARKIQVGTKGRSEKIRTYNF-PQNRVTDHRINKSLHDLESFMQGDCLLDD 351

Query: 346 FMKAT 350
            +++ 
Sbjct: 352 LIQSL 356


>gi|303280341|ref|XP_003059463.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459299|gb|EEH56595.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 289

 Score =  178 bits (452), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 102/253 (40%), Positives = 150/253 (59%), Gaps = 3/253 (1%)

Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
            +   LL G  D+  A + ++AGAGGT++QDW+ ML R Y +WA++R F         G+
Sbjct: 32  WEARRLLGGTYDALGATVFIYAGAGGTDAQDWSEMLERCYLQWADRRGFAVRVEARTPGD 91

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
           EAG+KS TL I+G  AYG+L  E+G HRLVR SP++  +    SF              +
Sbjct: 92  EAGLKSVTLEIEGRYAYGYLASEKGTHRLVRTSPFNKGA---FSFIHATRQTSFAAVDVM 148

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
              E    + T R+ GAGGQ+VN  ++AVR+ H+PTG+VV+C++ERSQ  N+A+A   L+
Sbjct: 149 PTLEDKIEVTTMRSGGAGGQNVNKVETAVRMKHLPTGIVVRCEEERSQAMNRAKAIARLK 208

Query: 282 AKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           AKL  +  ++R            +  WG+QIR+YV  PY+MVKD+RT +E +    V++G
Sbjct: 209 AKLAAVAEERRLADVAAVRGDVVKAEWGQQIRNYVFHPYKMVKDVRTGMETSDVEGVMNG 268

Query: 342 DLDDFMKATLAIK 354
            LD+F  A L  +
Sbjct: 269 KLDEFQNAWLRWR 281


>gi|218507716|ref|ZP_03505594.1| peptide chain release factor 1 [Rhizobium etli Brasil 5]
          Length = 282

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 102/260 (39%), Positives = 152/260 (58%), Gaps = 8/260 (3%)

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           +   +  Q   L    AD   A LE+ AG GG+E+  +A  L RMY R+A ++ +K E L
Sbjct: 14  EALEQEMQILLLPKDAADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAAEKGWKVEVL 73

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
              +GE  G K     I G   +  LK E GVHR+ R+   ++  R HTS +++ V P  
Sbjct: 74  SASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLP-E 132

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
            + I+IEI   D RIDT R+SGAGGQHVNTTDSAVRITH+P+G+VV    E+SQH+N+A+
Sbjct: 133 AEEIDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVRITHLPSGIVVTSS-EKSQHQNRAK 191

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEK 332
           A  +LR++LY+ E Q+    +      K+++G G    +IR+Y   P   V D R N+  
Sbjct: 192 AMQVLRSRLYDAERQR--ADSERSADRKSQVGSGDRSERIRTYNF-PQGRVTDHRINLTL 248

Query: 333 TSPSDVLDGDLDDFMKATLA 352
                +++G++++ + A +A
Sbjct: 249 YKLDRMMEGEIEEVVDALMA 268


>gi|254455525|ref|ZP_05068954.1| peptide chain release factor 1 [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207082527|gb|EDZ59953.1| peptide chain release factor 1 [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 357

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 110/344 (31%), Positives = 172/344 (50%), Gaps = 15/344 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  + + S L        L           +E   +   I   K+      D   L  +
Sbjct: 7   IEELILKHSTLEKDLSSRDL--EKKVFAEKSKEYSDISEVIVSAKKYLSYEKDKKELENI 64

Query: 76  ALEEDDCSI-----LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             +             E  +     +   +  +   L   EAD  +A +E+ AG GG E+
Sbjct: 65  LNDNSVDEELKKLADTELLELKDEYERNEKKLKLFLLPKDEADKKNAIIEIRAGTGGLEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A+ L +MY + + K+K+  E + I   +  G+K     IKG N Y  LK E GVHR+
Sbjct: 125 SLFASDLFKMYEKVSHKKKWALELISISRSDAGGLKEVIASIKGTNIYSTLKYESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++++I+E+D RID +RA G GGQ VNTTDSAV
Sbjct: 185 QRVPDTETQGRVHTSAATVAVLP-EAEEVDLKINEADLRIDVFRAGGPGGQSVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG+ V  Q E+SQHKNKA+   +LR++LYELE  + ++  +     KT+IG G 
Sbjct: 244 RITHIPTGLTVSQQDEKSQHKNKAKGMKILRSRLYELERSRIDQERSQ--DRKTKIGTGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
              +IR+Y   P   V D R N+      + L+G+  D+ +++ 
Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTLHRLEEFLEGEAFDEMIESL 344


>gi|320096082|ref|ZP_08027682.1| peptide chain release factor RF1 [Actinomyces sp. oral taxon 178
           str. F0338]
 gi|319976962|gb|EFW08705.1| peptide chain release factor RF1 [Actinomyces sp. oral taxon 178
           str. F0338]
          Length = 366

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 100/347 (28%), Positives = 153/347 (44%), Gaps = 11/347 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + +      P    +    + + R    L    +    +     D     E+
Sbjct: 11  LEPLLAEYAQVEQDMASPATLADPARLRRVGRRYAELGRVKAAADRLAAARDDLGAAREI 70

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E+   +      +       E   +          D+ +A LE+ AG GG ES  +A+
Sbjct: 71  AAEDPSFAQEVPALEEEAAAAHEALMRIL--APRDPQDALNAILEIKAGEGGEESALFAS 128

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVH 188
            L RMY R+AE   +    +     E  G K  TL I            +  LK E GVH
Sbjct: 129 DLARMYARYAEAHGWSVTEMSATRTELGGFKDVTLAIRAKGSPAPDEGVWAHLKYEGGVH 188

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS   ++  P ++D  ++ I  +D RID YR+SG GGQ VNTTDS
Sbjct: 189 RVQRVPVTESAGRIHTSAVGVFAMPEIEDDEDVVIDPNDLRIDVYRSSGPGGQSVNTTDS 248

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307
           AVR+TH+P+G+VV  Q E+SQ +NK  A  +L ++L      KRE  A+    S+   + 
Sbjct: 249 AVRVTHLPSGIVVSMQNEKSQLQNKEAALRVLASRLAAEARAKREAEASAQRLSQVRTVD 308

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
              +IR+Y   P   + D RT  +  +   VL G LD  + +     
Sbjct: 309 RSERIRTYNF-PENRIADHRTGFKAHNLDQVLGGALDPVIASLREAD 354


>gi|114609863|ref|XP_518818.2| PREDICTED: mitochondrial translational release factor 1-like
           isoform 6 [Pan troglodytes]
          Length = 380

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 114/305 (37%), Positives = 155/305 (50%), Gaps = 9/305 (2%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            L   I  + E +  L +   LL    E+       E +   + I           + S 
Sbjct: 63  ELLAVIRLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+ 
Sbjct: 123 ETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASA 182

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P     I + I+  D RI
Sbjct: 183 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILP-QPTEINLVINPKDLRI 241

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  A   LRAKLY + L+
Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLE 301

Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345
             EE      + K +I   G   +IR+Y   P   V D R N         + GD  LD+
Sbjct: 302 --EETNKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLLDE 358

Query: 346 FMKAT 350
            +++ 
Sbjct: 359 LVQSL 363


>gi|297828437|ref|XP_002882101.1| hypothetical protein ARALYDRAFT_904175 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297327940|gb|EFH58360.1| hypothetical protein ARALYDRAFT_904175 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 410

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 116/354 (32%), Positives = 182/354 (51%), Gaps = 17/354 (4%)

Query: 9   CLGGLFD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
            L  + D        R + L      P    +  E     +E + L +++  I +++ + 
Sbjct: 48  DLIKIMDQRLSAIEHRNALLQKLINQPEY--SPEEFSRANKELRKLRDSMFLINDLRAKQ 105

Query: 67  CDNLILLELALEEDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            +   L  L  E  D   + +       + ++  K          L   EAD  D  LEV
Sbjct: 106 KEIDGLKSLVSESSDDKDMLDMAVSELDEAVEEEKRLQTLLLKSLLPKDEADERDCILEV 165

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG GG E+  +A  + RMY R+++K+ +K + ++I + +  G K A+  I G + YG L
Sbjct: 166 RAGTGGEEASLFAMDIFRMYERYSQKKAWKFDIVDITESDMKGYKEASAAICGASVYGKL 225

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HR+ RI   + + R HTS  S+ + P   D +++++   D RIDTYR+ G+GGQ
Sbjct: 226 KFESGIHRVQRIPITEKSGRIHTSAISVAILPQ-ADEVDVQLRNEDLRIDTYRSGGSGGQ 284

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H NTT+SAVRI H+PTG++V  Q ERSQH N+A+A  +L A+LYE+E  + +   +   S
Sbjct: 285 HANTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVLCARLYEIERLRIQSSRSKLRS 344

Query: 302 SKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
              +IG G +   IR+Y   P   V D R  I   +  D++ G+ LD F+ A L
Sbjct: 345 D--QIGSGDRSGRIRTYNF-PQGRVTDHRVGITLHAIEDMMQGEILDSFIDALL 395


>gi|221124304|ref|XP_002161242.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
          Length = 281

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 108/265 (40%), Positives = 147/265 (55%), Gaps = 14/265 (5%)

Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
             Q   L     D+  A++E+ AG GG ES  +A  L RMYTR+ + +  +TE +   + 
Sbjct: 7   ELQRMLLPKDPDDARPAFVEIRAGTGGDESALFAVDLARMYTRYCDAKGLRTEIMSASES 66

Query: 161 EEAGIKSATLLIK--------GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
           E  G K   L I+           AYG LK E G HR+ R+   ++  R HTS  +I V 
Sbjct: 67  ELGGYKEVVLRIEGSTTTSAGSCGAYGMLKFESGGHRVQRVPATETQGRIHTSACTIAVL 126

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
              D++  I+I+ SD RIDTYRASGAGGQH+N TDSAVRITHIPTG+V +CQ  RSQH N
Sbjct: 127 AEQDEAEAIKINPSDLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVAECQDGRSQHSN 186

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTN 329
           KAQA  +L A++   E  + E  A      K+ +G G    +IR+Y   P   + D R N
Sbjct: 187 KAQALKVLTARI--HEKDRSERAAKDAAERKSLVGSGDRSDRIRTYNY-PQGRLTDHRIN 243

Query: 330 IEKTSPSDVLDGDLDDFMKATLAIK 354
           +        ++GDLDD ++A  A +
Sbjct: 244 LTLYKLDRAMEGDLDDVIEALQAYE 268


>gi|327327350|gb|EGE69126.1| peptide chain release factor 1 [Propionibacterium acnes HL103PA1]
          Length = 400

 Score =  178 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 108/343 (31%), Positives = 165/343 (48%), Gaps = 8/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   + L  + T+  D  +  +      L +    L + +S    +     D     +L
Sbjct: 48  IDEVRRCLREIETQLADFAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 107

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D +   E      ++ L           S   D  DA +E+H+G GG ES  +A 
Sbjct: 108 TE--EDPAFGLEAERLRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 165

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192
            LLRMY R+AE+  +    L     +  G ++  + +       AYG+LK E GVHR+ R
Sbjct: 166 DLLRMYIRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPLRPAYGYLKHEGGVHRVQR 225

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S+ R HTS   + V P VD++    I  ++ R+D YR+SG GGQ VNTTDSAVR+
Sbjct: 226 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPAEIRVDVYRSSGPGGQGVNTTDSAVRL 284

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311
           TH+ TG+VV CQ ERSQ +NKA+A  MLRAK+  L  Q+  +  +     +   +    +
Sbjct: 285 THLSTGIVVSCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 344

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +R+Y   P   + D R   +      +L GDL D + A  A +
Sbjct: 345 VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 386


>gi|301786516|ref|XP_002928673.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           [Ailuropoda melanoleuca]
          Length = 380

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 112/306 (36%), Positives = 157/306 (51%), Gaps = 9/306 (2%)

Query: 50  QHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS 109
             L  A   + E +  L +   LL    E+       E +   + I           + S
Sbjct: 62  SELLAAAKLLSEKEQELQETEHLLHDENEDLRKLAENEITSCQKEITQLKHQIILLLVPS 121

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            E D+ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+
Sbjct: 122 EETDANDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSEIGGLRHAS 181

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G  AY  +K E GVHR+ R+   +   R HTS  ++ V P     I + I+  D R
Sbjct: 182 ASIGGLEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAVLP-QPTEINLVINPKDLR 240

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+  A   LRAKLY + L
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSMYL 300

Query: 290 QKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LD 344
           +  EE +    + K ++   G   +IR+Y   P   V D R N         + G+  LD
Sbjct: 301 E--EETSKRYSARKIQVGTKGRSEKIRTYNF-PQNRVTDHRINKSLHDLETFMQGEYLLD 357

Query: 345 DFMKAT 350
           + +++ 
Sbjct: 358 ELVQSL 363


>gi|42569997|ref|NP_182225.3| peptide chain release factor, putative [Arabidopsis thaliana]
 gi|124301088|gb|ABN04796.1| At2g47020 [Arabidopsis thaliana]
 gi|330255695|gb|AEC10789.1| Peptide chain release factor 1 [Arabidopsis thaliana]
          Length = 413

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 116/354 (32%), Positives = 182/354 (51%), Gaps = 17/354 (4%)

Query: 9   CLGGLFD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
            L  + D        R + L      P    +  E     +E + L +++  I +++ + 
Sbjct: 51  DLIKIMDQRLSAIEHRNAVLQKLINQPEY--SPEEFSRANKELRKLRDSMLLINDLRAKQ 108

Query: 67  CDNLILLELALEEDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            +   L  L  E  D   + +       + ++  K          L   EAD  D  LEV
Sbjct: 109 KEIDGLKSLVSESSDDKDMLDLAVGELDEAVEEEKRLQTLLLKSLLPKDEADERDCILEV 168

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AG GG E+  +A  + RMY R+++K+ +K + ++I + +  G K A+  I G + YG L
Sbjct: 169 RAGTGGEEASLFAMDIFRMYERYSQKKGWKFDIVDITESDMKGYKEASAAICGASVYGKL 228

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E G+HR+ RI   + + R HTS  S+ + P   D +++++   D RIDTYR+ G+GGQ
Sbjct: 229 KFESGIHRVQRIPITEKSGRIHTSAISVAILPQ-ADEVDVQLRNEDLRIDTYRSGGSGGQ 287

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H NTT+SAVRI H+PTG++V  Q ERSQH N+A+A  +L A+LYE+E  + +   +   S
Sbjct: 288 HANTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVLCARLYEIERLRIQSSRSKLRS 347

Query: 302 SKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
              +IG G +   IR+Y   P   V D R  I   +  D++ G+ LD F+ A L
Sbjct: 348 D--QIGSGDRSGRIRTYNF-PQGRVTDHRVGITHHAIEDMMQGENLDMFIDALL 398


>gi|149183883|ref|ZP_01862274.1| peptide chain release factor 1 [Bacillus sp. SG-1]
 gi|148848402|gb|EDL62661.1| peptide chain release factor 1 [Bacillus sp. SG-1]
          Length = 253

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 96/248 (38%), Positives = 142/248 (57%), Gaps = 7/248 (2%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
             D  +  +EV   AGG E+  +A  L RMY+R+AE + +KTE +E +     G K    
Sbjct: 1   PNDDKNVIMEVRGAAGGDEAALFAGDLYRMYSRFAEAQGWKTEVMEANSTGVGGYKEIIF 60

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
           +I G  AY  +K E G HR+ R+   +S  R HTS +++   P   + +EI+I E D R+
Sbjct: 61  MINGNGAYSKMKYENGAHRVQRVPETESGGRIHTSTATVACLP-EAEEVEIDIHEKDIRV 119

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT+ +SG GGQ VNTT SAVR+TH+PTGVVV CQ E+SQ KNK +A  +LRA++Y+    
Sbjct: 120 DTFASSGPGGQSVNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKF-- 177

Query: 291 KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
           +RE  A    + K+ +G G    +IR+Y   P   V D R  +       +L+G +D+ +
Sbjct: 178 QREVQAEYDANRKSAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILEGKMDEVI 236

Query: 348 KATLAIKK 355
            A +   +
Sbjct: 237 DALILEDQ 244


>gi|148243244|ref|YP_001228401.1| peptide chain release factor 1 [Synechococcus sp. RCC307]
 gi|166223614|sp|A5GVY9|RF1_SYNR3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|147851554|emb|CAK29048.1| Peptide chain release factor 1 [Synechococcus sp. RCC307]
          Length = 364

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 99/348 (28%), Positives = 164/348 (47%), Gaps = 13/348 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +  + L  +  DP +  +  +   L +ER  L+  +   + +Q    ++    +L
Sbjct: 10  LEATCRTFNALERQLADPSVAADPEQLLTLAKERSRLEPLVLDYQRLQQLHAEHQQAQQL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-----LSGEADSNDAYLEVHAGAGGTES 130
             E    + L+  +    +     + +  + L      S   D     LE+ AGAGG E+
Sbjct: 70  LKESKGDAELEALAQEELQQLSSEQEQLNQRLKVALLPSDPRDERSVMLEIRAGAGGDEA 129

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             WA  L RMY R A+   ++   +   + E  G K   L I+G   +  LK E GVHR+
Sbjct: 130 CLWAGDLARMYERHAQTCGWQVNPVSASEAELGGFKELILAIRGDAVFSQLKYEAGVHRV 189

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS +++ V P   D ++++I   D  I T R+ GAGGQ+VN  ++AV
Sbjct: 190 QRVPATESQGRVHTSTATVAVMP-EADPVDVQIDPKDLDISTARSGGAGGQNVNKVETAV 248

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
            + H PTG+ V C QERSQ +N+ +A  +LRAK   L  ++ E  A    + + ++G G 
Sbjct: 249 DLLHKPTGIRVFCTQERSQLQNRERAMEILRAK--LLAKEEEEAAAAESSARRAQVGSGD 306

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +IR+Y  +      D R   +      VL+G L D ++A     +
Sbjct: 307 RSEKIRTYNYKD-NRTTDHRLG-KNFPLETVLNGQLSDLIEACTHADQ 352


>gi|314981451|gb|EFT25545.1| peptide chain release factor 1 [Propionibacterium acnes HL110PA3]
          Length = 379

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 108/343 (31%), Positives = 165/343 (48%), Gaps = 8/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   + L  + T+  D  +  +      L +    L + +S    +     D     +L
Sbjct: 27  IDEVRRCLREIETQLADFAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 86

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D +   E      ++ L           S   D  DA +E+H+G GG ES  +A 
Sbjct: 87  TE--EDPAFGLEAERLRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 144

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192
            LLRMY R+AE+  +    L     +  G ++  + +       AYG+LK E GVHR+ R
Sbjct: 145 DLLRMYIRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPLRPAYGYLKHEGGVHRVQR 204

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S+ R HTS   + V P VD++    I  ++ R+D YR+SG GGQ VNTTDSAVR+
Sbjct: 205 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPAEIRVDVYRSSGPGGQGVNTTDSAVRL 263

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311
           TH+ TG+VV CQ ERSQ +NKA+A  MLRAK+  L  Q+  +  +     +   +    +
Sbjct: 264 THLSTGIVVSCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 323

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +R+Y   P   + D R   +      +L GDL D + A  A +
Sbjct: 324 VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 365


>gi|255548277|ref|XP_002515195.1| peptide chain release factor, putative [Ricinus communis]
 gi|223545675|gb|EEF47179.1| peptide chain release factor, putative [Ricinus communis]
          Length = 422

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 113/350 (32%), Positives = 179/350 (51%), Gaps = 18/350 (5%)

Query: 19  AVQRLSFLNTKTE-DPHLWQN----VIEAKMLMRERQHLD---NAISFIKEIQDRLCDNL 70
             QRLS +  ++    +          E     +E + L      IS ++ IQ  +    
Sbjct: 65  MEQRLSAIEHRSAYLENFIDKLEASPAEYSRANKELRKLRRPVELISELRSIQKEIDGLR 124

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGT 128
            L+    E+     +     N    + +            + +AD  D  LEV AG GG 
Sbjct: 125 SLMAECPEDKHMIDMANEELNQAIEEEKRLQNVLLKSLLPTDDADERDCILEVRAGTGGE 184

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  ++  + RMY R+++K+ +K E ++I + +  G K A+  I G   +G LK E G+H
Sbjct: 185 EASLFSMDIFRMYERYSQKKGWKFEVVDITESDLKGYKEASAAISGAGVFGKLKFESGIH 244

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   + + R HTS  S+ + P   D +++++   D RIDTYR+ G+GGQH NTT+S
Sbjct: 245 RVQRVPVTEKSGRVHTSAVSVAILPQ-ADEVDVQLRNEDLRIDTYRSGGSGGQHANTTNS 303

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+TH+PTG+ V  Q ERSQH NKA+A  +L AKLYE+E  + +   +   S   +IG 
Sbjct: 304 AVRVTHLPTGMTVSIQDERSQHMNKAKALKVLCAKLYEIERSRIQMSRSKLRSE--QIGS 361

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354
           G    +IR+Y   P   V D R  I   + ++++ G+ LD F+ A L  +
Sbjct: 362 GDRSERIRTYNF-PQGRVTDHRVGITHHAINNMMQGESLDVFIDALLLQQ 410


>gi|314923482|gb|EFS87313.1| peptide chain release factor 1 [Propionibacterium acnes HL001PA1]
 gi|315092954|gb|EFT64930.1| peptide chain release factor 1 [Propionibacterium acnes HL060PA1]
 gi|315103525|gb|EFT75501.1| peptide chain release factor 1 [Propionibacterium acnes HL050PA2]
          Length = 379

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 108/343 (31%), Positives = 165/343 (48%), Gaps = 8/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   + L  + T+  D  +  +      L +    L + +S    +     D     +L
Sbjct: 27  IDEVRRCLREIETQLADFAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 86

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D +   E      ++ L           S   D  DA +E+H+G GG ES  +A 
Sbjct: 87  TE--EDPAFGLEAERLRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 144

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192
            LLRMY R+AE+  +    L     +  G ++  + +       AYG+LK E GVHR+ R
Sbjct: 145 DLLRMYIRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPLRPAYGYLKHEGGVHRVQR 204

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S+ R HTS   + V P VD++    I  ++ R+D YR+SG GGQ VNTTDSAVR+
Sbjct: 205 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPAEIRVDVYRSSGPGGQGVNTTDSAVRL 263

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311
           TH+ TG+VV CQ ERSQ +NKA+A  MLRAK+  L  Q+  +  +     +   +    +
Sbjct: 264 THLSTGIVVSCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 323

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +R+Y   P   + D R   +      +L GDL D + A  A +
Sbjct: 324 VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 365


>gi|314966526|gb|EFT10625.1| peptide chain release factor 1 [Propionibacterium acnes HL082PA2]
          Length = 379

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 108/343 (31%), Positives = 165/343 (48%), Gaps = 8/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   + L  + T+  D  +  +      L +    L + +S    +     D     +L
Sbjct: 27  IDEVRRCLREIETQLADFAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 86

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D +   E      ++ L           S   D  DA +E+H+G GG ES  +A 
Sbjct: 87  TE--EDPAFGLEAERLRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 144

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192
            LLRMY R+AE+  +    L     +  G ++  + +       AYG+LK E GVHR+ R
Sbjct: 145 DLLRMYIRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPLRPAYGYLKHEGGVHRVQR 204

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S+ R HTS   + V P VD++    I  ++ R+D YR+SG GGQ VNTTDSAVR+
Sbjct: 205 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPAEIRVDVYRSSGPGGQGVNTTDSAVRL 263

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311
           TH+ TG+VV CQ ERSQ +NKA+A  MLRAK+  L  Q+  +  +     +   +    +
Sbjct: 264 THLSTGIVVSCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 323

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +R+Y   P   + D R   +      +L GDL D + A  A +
Sbjct: 324 VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 365


>gi|321310997|ref|YP_004193326.1| peptide chain release factor 1 [Mycoplasma haemofelis str. Langford
           1]
 gi|319802841|emb|CBY93487.1| peptide chain release factor 1 [Mycoplasma haemofelis str. Langford
           1]
          Length = 364

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 110/347 (31%), Positives = 174/347 (50%), Gaps = 16/347 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                ++   LN + E         E   + +E   L+       E +  L +    LE+
Sbjct: 13  LATIHEKYVQLNKRLEQET---EGKEIIQINKEIAKLEKIAQGFIEYKKELENLDECLEI 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             +E +   ++     L+  K  +   +       + +   D  +  +E+ + AGG ES 
Sbjct: 70  IKKESNPEFVKLAQSELEAGKRRIPELENSLKRLLIPTDPMDEKNVIVEMRSAAGGDEST 129

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   L   Y R+A+   +K   L I +    G+      + G N +  +K E GVHR+ 
Sbjct: 130 IFVENLFDTYKRYADMNNWKLTILNIQENSI-GMHFLAFSLSGKNVFSKMKFESGVHRVQ 188

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P   D IEI I  SD RID YRASGAGGQHVN T+S+VR
Sbjct: 189 RVPATESKGRVHTSTITVSVMP-EQDDIEINIDPSDLRIDVYRASGAGGQHVNKTESSVR 247

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITH+PTG+VV CQQE+SQ +N+A A  MLR+KL+E E +K+ +   I E+ + +IG G  
Sbjct: 248 ITHLPTGIVVACQQEKSQIQNRAFAMKMLRSKLWEHEQEKQSKE--IAETVRKQIGRGFR 305

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLAIK 354
             +IR+Y   P   + D R ++     ++++  GDL +  ++ L  +
Sbjct: 306 CEKIRTYNY-PQNRITDHRVSLTLNKLNEIMIGGDLTEIHESLLNQQ 351


>gi|281345517|gb|EFB21101.1| hypothetical protein PANDA_018665 [Ailuropoda melanoleuca]
          Length = 379

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 112/306 (36%), Positives = 157/306 (51%), Gaps = 9/306 (2%)

Query: 50  QHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS 109
             L  A   + E +  L +   LL    E+       E +   + I           + S
Sbjct: 62  SELLAAAKLLSEKEQELQETEHLLHDENEDLRKLAENEITSCQKEITQLKHQIILLLVPS 121

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            E D+ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+
Sbjct: 122 EETDANDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSEIGGLRHAS 181

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G  AY  +K E GVHR+ R+   +   R HTS  ++ V P     I + I+  D R
Sbjct: 182 ASIGGLEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAVLP-QPTEINLVINPKDLR 240

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+  A   LRAKLY + L
Sbjct: 241 IDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSMYL 300

Query: 290 QKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LD 344
           +  EE +    + K ++   G   +IR+Y   P   V D R N         + G+  LD
Sbjct: 301 E--EETSKRYSARKIQVGTKGRSEKIRTYNF-PQNRVTDHRINKSLHDLETFMQGEYLLD 357

Query: 345 DFMKAT 350
           + +++ 
Sbjct: 358 ELVQSL 363


>gi|197294284|ref|YP_001798825.1| Protein chain release factor A [Candidatus Phytoplasma
           australiense]
 gi|226739118|sp|B1V950|RF1_PHYAS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|171853611|emb|CAM11482.1| Protein chain release factor A [Candidatus Phytoplasma
           australiense]
          Length = 354

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 101/349 (28%), Positives = 167/349 (47%), Gaps = 16/349 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN----LI 71
                Q+   L           N I    + +    L+  +   ++              
Sbjct: 5   LKKIQQKYQNLQQDLLQNQSISNKIN---IFKNLSKLEPIVELFQQYLTLEEQLTNITKA 61

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGTE 129
           L +  +E+ +   L +        + +V + Q   L       D  +  LE+    GG E
Sbjct: 62  LNQDQIEDKEILELAQKEKETLSQQKKVLWNQLRILLLPQDPEDQKNVILEIKGAVGGNE 121

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  LLR Y ++AE +K+K E L +H   + G+ S  LLI G N Y +LK E GVHR
Sbjct: 122 ANLFAADLLRTYMKYAESKKWKVEILNLHPSIKGGLSSVELLISGQNIYSFLKYESGVHR 181

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +   R HTS + + V P     +EI+I  +D R DT+ +SG GGQ VNTT SA
Sbjct: 182 VQRVPATEVQGRIHTSTAIVLVLP-EAKEVEIKIDWNDIRTDTFNSSGPGGQSVNTTKSA 240

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VR++H+P+G+ V CQ+ +SQH+NK +A+ +L+A++Y   L  ++E  N     K+ +G G
Sbjct: 241 VRLSHLPSGISVACQEGKSQHENKEKAFTLLKARIYNQILNAKQEAENKH--RKSLVGTG 298

Query: 310 ---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
               +IR+Y   P   + D R  +       +++G LD  ++  +   +
Sbjct: 299 DRSEKIRTYNY-PQNRITDHRIGLTLQKLDIIMEGKLDFIIEPLIDATQ 346


>gi|330840796|ref|XP_003292395.1| hypothetical protein DICPUDRAFT_40482 [Dictyostelium purpureum]
 gi|325077351|gb|EGC31069.1| hypothetical protein DICPUDRAFT_40482 [Dictyostelium purpureum]
          Length = 330

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 123/333 (36%), Positives = 187/333 (56%), Gaps = 10/333 (3%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
                  +           ++E   L   I     + +   D   ++E++ +E D  +L 
Sbjct: 4   EELLSSNNNID-----IKDIKEYNSLKAVIDEFNSLNNSFKDYQEIVEMSKKEGDQEMLN 58

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
           E+ + L  +       +   L+ GE D N  ++EVHAG GG +S DW  ++ +MY  WAE
Sbjct: 59  ESRNLLNSLYSICTDLEINVLMIGEEDDNSCFIEVHAGVGGADSMDWTEIIHKMYINWAE 118

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSF 206
           ++ F+   +E   GE  G++ ATL I G NAYGWL+ E G+H+L+RISP+  + +RHTSF
Sbjct: 119 RKGFQVSIIESIPGEF-GLRRATLKIDGKNAYGWLRTEMGIHKLIRISPFSPDFKRHTSF 177

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           +S+ VYP  D+SI +++  +D +I+  R+SGAGGQHVNTT+SAVRI HIPT + V C  E
Sbjct: 178 ASVVVYPSSDNSINVDLKPNDLKIEFTRSSGAGGQHVNTTESAVRIVHIPTNISVFCSSE 237

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG--WGRQIRSYVLQPYQMVK 324
           RSQH+NKA   ++L+ K++   L  + E            G   G  +RSY + P + VK
Sbjct: 238 RSQHQNKAIGLDLLKTKIFRHYLSIKNEKEKKFRDELGTNGFASGNIVRSYTMHPQERVK 297

Query: 325 DLRTNIEKTSPSDVLDGD--LDDFMKATLAIKK 355
           D RT  E +  S +L+GD  LD  +K  L++ +
Sbjct: 298 DQRTGFETSQLSKILEGDEELDKMIKLALSVSQ 330


>gi|296128915|ref|YP_003636165.1| peptide chain release factor 1 [Cellulomonas flavigena DSM 20109]
 gi|296020730|gb|ADG73966.1| peptide chain release factor 1 [Cellulomonas flavigena DSM 20109]
          Length = 392

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 108/342 (31%), Positives = 169/342 (49%), Gaps = 11/342 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  +   + +     DP +  +   A+ L R    L   +   ++ +    D     EL
Sbjct: 36  VEAMLAEHAQIERDLADPAVHADAARARRLGRRYAELGRVVQAYRQWRAAADDAQAAAEL 95

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           A E+   +              E  ++    +     D  D  LE+ AG GG ES  +A 
Sbjct: 96  AAEDASFATEVPALQAAADEAAERLHRVL--VPRDPDDGRDVILEIKAGEGGEESALFAG 153

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-------KGPNAYGWLKGEQGVH 188
            LLRMYTR+AE++ +  + L+  + +  G+K A + +            +  LK E GVH
Sbjct: 154 DLLRMYTRYAERQGWSVQVLDATESDLGGVKDAQVAVKARAAGPPEDGVWAHLKYEGGVH 213

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   +S  R HTS + + V+P  DD  +++I ++D RID YR+SG GGQ VNTTDS
Sbjct: 214 RVQRVPVTESQGRIHTSAAGVMVFPEADDDGDVDIDQNDLRIDVYRSSGPGGQSVNTTDS 273

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IG 307
           AVRITH+PTG+VV  Q E+SQ +N+ QA  +LRA+L     ++    A+    S+   + 
Sbjct: 274 AVRITHVPTGIVVSMQNEKSQLQNREQAMRVLRARLLAARQEEAAAAASEARRSQVRTVD 333

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              +IR+Y   P   + D RT  +  +   VLDGDL   + +
Sbjct: 334 RSERIRTYNF-PENRIADHRTGYKAYNLDQVLDGDLGPVIAS 374


>gi|282853790|ref|ZP_06263127.1| peptide chain release factor 1 [Propionibacterium acnes J139]
 gi|282583243|gb|EFB88623.1| peptide chain release factor 1 [Propionibacterium acnes J139]
          Length = 361

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 108/343 (31%), Positives = 165/343 (48%), Gaps = 8/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   + L  + T+  D  +  +      L +    L + +S    +     D     +L
Sbjct: 9   IDEVRRCLREIETQLADFAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D +   E      ++ L           S   D  DA +E+H+G GG ES  +A 
Sbjct: 69  TE--EDPAFGLEAERLRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 126

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192
            LLRMY R+AE+  +    L     +  G ++  + +       AYG+LK E GVHR+ R
Sbjct: 127 DLLRMYIRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPLRPAYGYLKHEGGVHRVQR 186

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S+ R HTS   + V P VD++    I  ++ R+D YR+SG GGQ VNTTDSAVR+
Sbjct: 187 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPAEIRVDVYRSSGPGGQGVNTTDSAVRL 245

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311
           TH+ TG+VV CQ ERSQ +NKA+A  MLRAK+  L  Q+  +  +     +   +    +
Sbjct: 246 THLSTGIVVSCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 305

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +R+Y   P   + D R   +      +L GDL D + A  A +
Sbjct: 306 VRTYNF-PENRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 347


>gi|40062805|gb|AAR37689.1| peptide chain release factor 1 [uncultured marine bacterium 440]
          Length = 359

 Score =  176 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 107/332 (32%), Positives = 172/332 (51%), Gaps = 14/332 (4%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            V     L  +    ++  +  +     +E   +   I+  K       + + L ++  +
Sbjct: 10  IVDTYKTLEIQLASGNI--SKKDFVKKSKEYSSIGEVINQAKGYLSFEKEKIELEKIIED 67

Query: 79  EDDCSILQETSDNL-----QRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           ++    + + +        ++ K   +  +   L    AD+ +A LE+ AG GG E+  +
Sbjct: 68  KESDEEMVQLAKKELNELLEKNKTHEKILRIYLLPKDGADAKNAILEIRAGTGGDEAGLF 127

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
              L +MY +     K+  E + I      G K   LLIKG N Y +LK E+GVHR+ R+
Sbjct: 128 VADLYKMYEKVCLNNKWSFEIISISKSGAGGFKEVILLIKGNNIYSFLKYERGVHRVQRV 187

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              ++  R HTS +++ V P   + ++I+I E D RID YR++G+GGQ VNTTDSAVRIT
Sbjct: 188 PKTETQGRVHTSAATVAVLP-EAEEVDIKIQEKDLRIDVYRSTGSGGQSVNTTDSAVRIT 246

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           HIPTG+VV  Q E+SQHKN+A+   +LR+++YE E +K+++     +  K +IG G    
Sbjct: 247 HIPTGIVVTNQDEKSQHKNRAKGMKILRSRVYEAEREKKDKER--SKDRKNQIGSGDRSE 304

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           +IR+Y   P   V D R N+      + L GD
Sbjct: 305 RIRTYNF-PQGRVTDHRINVTLHKLKEFLSGD 335


>gi|311243768|ref|XP_003121185.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           [Sus scrofa]
          Length = 380

 Score =  176 bits (446), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 112/305 (36%), Positives = 155/305 (50%), Gaps = 9/305 (2%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            L      + E +  L +   LL    E+       E     + I           + S 
Sbjct: 63  ELVAVAKLLTEKERELLETEHLLHDESEDLRKLAENEIISCQKEIAQLKHQIVLLLVPSE 122

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           EAD ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+ 
Sbjct: 123 EADENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFEILEYFPSEIGGLRHASA 182

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P     I + I+  D RI
Sbjct: 183 SIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILP-QPTEINLVINPKDLRI 241

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+  A   LRAKLY L L+
Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSLHLE 301

Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345
             EE +    + K ++   G   +IR+Y   P   V D R N         + G+  LD+
Sbjct: 302 --EETSKRYNARKVQVGTKGRSEKIRTYNF-PQNRVTDHRINKSLYDLGTFMQGEYLLDE 358

Query: 346 FMKAT 350
            +++ 
Sbjct: 359 LVQSL 363


>gi|315092115|gb|EFT64091.1| peptide chain release factor 1 [Propionibacterium acnes HL110PA4]
          Length = 379

 Score =  176 bits (446), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 107/343 (31%), Positives = 164/343 (47%), Gaps = 8/343 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D   + L  + T+  D  +  +      L +    L + +S    +     D     +L
Sbjct: 27  IDEVRRCLREIETQLADFAVLSDPSAMGRLGKRHARLRHVVSVADRVDQLRADVEAAEDL 86

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
               +D +   E      ++ L           S   D  DA +E+H+G GG ES  +A 
Sbjct: 87  TE--EDPAFGLEAERLRGQLDLASTELTELLAPSDPLDQEDALVEIHSGEGGEESALFAA 144

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI---KGPNAYGWLKGEQGVHRLVR 192
            LLRMY R+AE+  +    L     +  G ++  + +       AYG+LK E GVHR+ R
Sbjct: 145 DLLRMYIRYAERVGWSVRELTSEPTDLGGYRTVVIAVAGVPLRPAYGYLKHEGGVHRVQR 204

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S+ R HTS   + V P VD++    I  ++ R+D YR+SG GGQ VNTTDSAVR+
Sbjct: 205 VPVTESSGRIHTSAVGVLVMPDVDETEVD-IDPAEIRVDVYRSSGPGGQGVNTTDSAVRL 263

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQ 311
           TH+ TG+VV CQ ERSQ +NKA+A  MLRAK+  L  Q+  +  +     +   +    +
Sbjct: 264 THLSTGIVVSCQNERSQLQNKAEAMRMLRAKVAALAAQQAADENDRMRRDQVRTVDRSAR 323

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +R+Y       + D R   +      +L GDL D + A  A +
Sbjct: 324 VRTYNFS-QNRLTDHRIGYKSRKLDQILAGDLGDVLDALHADE 365


>gi|114052078|ref|NP_001039843.1| peptide chain release factor 1-like, mitochondrial precursor [Bos
           taurus]
 gi|122135943|sp|Q2KI15|RF1ML_BOVIN RecName: Full=Peptide chain release factor 1-like, mitochondrial;
           AltName: Full=Mitochondrial translational release factor
           1-like; Flags: Precursor
 gi|86826548|gb|AAI12807.1| Mitochondrial translational release factor 1-like [Bos taurus]
          Length = 380

 Score =  176 bits (446), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 111/305 (36%), Positives = 156/305 (51%), Gaps = 9/305 (2%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            L      + + +  L +   LL    E+       E +   + I           + S 
Sbjct: 63  ELVAVAKLLSDKEQELQETQHLLHDENEDLRKLAENEITSCEKEIAQLKHQIILLLVPSE 122

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+ 
Sbjct: 123 ETDKNDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSEIGGLRHASA 182

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P     I + I+  D RI
Sbjct: 183 SIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILP-QPTEINLVINPKDLRI 241

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT RASGAGGQHVNTTDSAVRI H+PTG+V +CQQERSQ KNK  A   LRAKLY L+L+
Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTGIVSECQQERSQLKNKEMAMKKLRAKLYSLQLE 301

Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345
             EE +    + K +I   G   +IR+Y   P   V D R N         + G+  LD+
Sbjct: 302 --EETSKRYNARKIQIGTKGRSEKIRTYNF-PQNRVTDHRINKSLHDLETFMQGEYLLDE 358

Query: 346 FMKAT 350
            +++ 
Sbjct: 359 LVQSL 363


>gi|296483896|gb|DAA26011.1| peptide chain release factor 1-like, mitochondrial precursor [Bos
           taurus]
          Length = 380

 Score =  176 bits (446), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 111/305 (36%), Positives = 156/305 (51%), Gaps = 9/305 (2%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            L      + + +  L +   LL    E+       E +   + I           + S 
Sbjct: 63  ELVAVAKLLSDKEQELQETQHLLHDENEDLRKLAENEITSCEKEIAQLKHQIILLLVPSE 122

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+ 
Sbjct: 123 ETDKNDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSEIGGLRHASA 182

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P     I + I+  D RI
Sbjct: 183 SIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILP-QPTEINLVINPKDLRI 241

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT RASGAGGQHVNTTDSAVRI H+PTG+V +CQQERSQ KNK  A   LRAKLY L+L+
Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTGIVSECQQERSQLKNKEMAMKKLRAKLYSLQLE 301

Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345
             EE +    + K +I   G   +IR+Y   P   V D R N         + G+  LD+
Sbjct: 302 --EETSKRYNARKIQIGTKGRSEKIRTYNF-PQNRVTDHRINKSLHDLETFMQGEYLLDE 358

Query: 346 FMKAT 350
            +++ 
Sbjct: 359 LVQSL 363


>gi|325283363|ref|YP_004255904.1| Peptide chain release factor 1 [Deinococcus proteolyticus MRP]
 gi|324315172|gb|ADY26287.1| Peptide chain release factor 1 [Deinococcus proteolyticus MRP]
          Length = 377

 Score =  176 bits (445), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 107/352 (30%), Positives = 165/352 (46%), Gaps = 18/352 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNV-IEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLI 71
               V     +     DP +      E   L R  + L   ++  +E +       D+  
Sbjct: 6   LSELVSEFGMVERALGDPAVLAEGGREYTRLTRRHRELSPLVTLYREYETLGQEQQDSRE 65

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           LL      +      E               +   L +   D NDA LE+ +GAGG E+ 
Sbjct: 66  LLADPELREMAQAELERISARLA--EVESELEVLLLPTDPLDPNDAVLEIRSGAGGAEAA 123

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLRMY+R+AE    + E L+ ++ +  G       + G  AY  LK E GVHR+ 
Sbjct: 124 LFAADLLRMYSRYAESAGLRLEVLDSNESDLGGFAKVVAEVTGEFAYRTLKWESGVHRVQ 183

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS  ++ V P V+ S    +  S+ RID +R+ GAGGQ VNTTDSAVR
Sbjct: 184 RVPATESQGRIHTSTVTVAVLPQVEQSEVQ-LDLSEVRIDVFRSQGAGGQSVNTTDSAVR 242

Query: 252 ITHI---PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
            T+    P  ++V CQ  RSQ KN+ +A  +L ++L E E +K++  A+  E+  ++IG 
Sbjct: 243 ATYRAGTPDEIMVVCQDGRSQIKNREKALMILASRLAEREREKQQ--ASEREARSSQIGS 300

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTS--PSDVLDGDLDDFMKATLAIKK 355
           G    ++R+Y   P   V D R   E  +     V+ G L++ + A    ++
Sbjct: 301 GDRSEKVRTYNY-PQNRVTDHRLEGETKNFPLETVIGGRLEELVGALARQQR 351


>gi|148260023|ref|YP_001234150.1| peptide chain release factor 1 [Acidiphilium cryptum JF-5]
 gi|166223523|sp|A5FX99|RF1_ACICJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|146401704|gb|ABQ30231.1| bacterial peptide chain release factor 1 (bRF-1) [Acidiphilium
           cryptum JF-5]
          Length = 352

 Score =  176 bits (445), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 164/344 (47%), Gaps = 11/344 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  V R   L           +        RE   ++     I  ++            
Sbjct: 7   LDRIVLRAEELRAMLAAG---VDGERFVAASRELAEIEPVEQQILLLRAAERARDEAEAA 63

Query: 76  ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   +     D+L+          +   L    AD   A LE+   AGG E+  +A
Sbjct: 64  RADPELRELADAELDSLRETLPRLEHEIRLALLPRDAADERPAILEIRPAAGGDEAALFA 123

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L   Y R+A+ R ++ E L+  + E  G++     I G   +  LK E GVHR+ R+ 
Sbjct: 124 AELFAAYRRYADLRGWRFEILDYTETELGGLREGIAEITGRAVFARLKFESGVHRVQRVP 183

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS  ++ V P   + +++E++E+D RID +RASGAGGQHVN T+SAVRITH
Sbjct: 184 ATETQGRIHTSTVTVAVLP-EAEDVDVEVNEADLRIDVFRASGAGGQHVNKTESAVRITH 242

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +PTG+VV  Q+ERSQHKN+A+A  +LRA+LY  E  +    A      K+++G G    +
Sbjct: 243 LPTGIVVAMQEERSQHKNRAKAMKILRARLY--EQTRAAAAAGRAADRKSQVGTGDRSER 300

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           IR+Y   P   V D R N+       V+ G+ D+ + A     +
Sbjct: 301 IRTYNF-PQGRVTDHRINLTLHKIDRVMLGEFDEIIDALTEEDQ 343


>gi|281208935|gb|EFA83110.1| peptide chain release factor 1 [Polysphondylium pallidum PN500]
          Length = 463

 Score =  176 bits (445), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 100/341 (29%), Positives = 181/341 (53%), Gaps = 14/341 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 + + L +  E   L  +  + K    + Q ++ ++   ++  + + +   L  +
Sbjct: 110 LKMMSNKYTTLKSLMESQTL--SQEDIKRTSNDAQQIEESVQLFRQYVNEIGNIKELKMM 167

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL----LSGEADSNDAYLEVHAGAGGTESQ 131
              E + +  +   ++L+ +  ++   +   +     + + D  +A +E+ AG GG E+Q
Sbjct: 168 LDMEKEEASREMIIEDLKAMGEQLAALEKSLIYSLLPADKDDDGNAIIEIRAGTGGGEAQ 227

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A+ + RMY  +A  + ++ E+L+I   +  G + A+  I G   +G+LK E GVHR+ 
Sbjct: 228 LFAHEMFRMYEGYAATKGWRFESLDISYTDVGGCREASAAISGKGVFGFLKNESGVHRVQ 287

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI   ++  R HTS +++ + P     ++I+I++ D +ID +R+SG GGQ VNTTDSAVR
Sbjct: 288 RIPDTETQGRIHTSTTTVAIMP-EPKEVDIKINDRDLKIDVFRSSGNGGQSVNTTDSAVR 346

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---W 308
           I H+PTG+ V  Q ERSQ +NK++A  +LRA+LYE+E  + +          ++IG    
Sbjct: 347 IVHLPTGITVSMQDERSQLQNKSKAMKVLRARLYEMERVRLQTER--SAERNSQIGGATR 404

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMK 348
             +IR+Y   P   V D R NI       ++ G+ L DF++
Sbjct: 405 SERIRTYNF-PQDRVTDHRVNITTNDIDAIMTGETLGDFIE 444


>gi|149744102|ref|XP_001501636.1| PREDICTED: similar to Mitochondrial translational release factor
           1-like [Equus caballus]
          Length = 380

 Score =  176 bits (445), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 110/305 (36%), Positives = 155/305 (50%), Gaps = 9/305 (2%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            L      + E +  L +   LL    E+       E +   + I           + S 
Sbjct: 63  ELVAVARLLSEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E + ND  LEV AG GG E+  + + +  MY R+A  +++  E LE    E  G++ A+ 
Sbjct: 123 ETNENDLILEVTAGVGGQEAMLFTSEIFDMYQRYAAFKRWHFETLEYFPSEIGGLRHASA 182

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P     I + I+  D RI
Sbjct: 183 SIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILP-QPTEINLVINPKDLRI 241

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+  A   LRAKLY + ++
Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSMHVE 301

Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345
             EE +    + K +I   G   +IR+Y   P   V D R N         + G+  LD+
Sbjct: 302 --EETSKRYNARKVQIGTKGRSEKIRTYNF-PQNRVTDHRINKSLHDLETFMQGENLLDE 358

Query: 346 FMKAT 350
            +++ 
Sbjct: 359 LVQSL 363


>gi|7573420|emb|CAB87736.1| translation releasing factor RF-1-like protein [Arabidopsis
           thaliana]
          Length = 419

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 98/355 (27%), Positives = 174/355 (49%), Gaps = 19/355 (5%)

Query: 9   CLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            +  +   ++  +    L+ K  DP +  N  E + L +    LD  ++  +  +D    
Sbjct: 57  LIRKM---ESVEKTWKELSVKLADPDVVSNQSEYQKLAQSMSELDEVVTVFRRFKDCEKQ 113

Query: 69  NLILLELALEEDDCSILQETS-----DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            L    LA E  D   + E          + I+   +  +   L S   D+ +  LEV A
Sbjct: 114 LLESKVLAKEAGDDEDMAEMIGSEINSLTKEIEELEKQLKVLLLPSDPLDARNILLEVRA 173

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G GG E+  W   L+       ++ +              G K+  + IKG   Y  LK 
Sbjct: 174 GTGGDEAAIWTGDLVGADVSEVQRAQLLEVFNGFMLR---GYKTCVMEIKGNRVYSKLKY 230

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHR+ R+   ++  R HTS +++ + P   D +E+ I   D  + + R+ GAGGQ+V
Sbjct: 231 ESGVHRVQRVPQTETQGRVHTSTATVAIMP-EADEVEVVIDPKDIELTSARSGGAGGQNV 289

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           N  ++A+ + H P+G+ + C +ER+Q +NKA+A+ +LRAKLYE+++++++E   I    K
Sbjct: 290 NKVETAIDLFHKPSGIRIFCTEERTQIRNKARAFQLLRAKLYEIKVREQQE--KIRNERK 347

Query: 304 TEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +++G G    +IR+Y  +    V D R  +   + +  LDG L+D ++A  A+++
Sbjct: 348 SQVGTGARSEKIRTYNYKD-SRVTDHRLKM-NFALTTFLDGALEDAVQACAALEQ 400


>gi|54288338|gb|AAV31626.1| predicted protein chain release factor A [uncultured alpha
           proteobacterium EBAC2C11]
          Length = 335

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 109/307 (35%), Positives = 158/307 (51%), Gaps = 13/307 (4%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
             N   A+ L RE   L      I+ ++    +    L +  E  + + + E       +
Sbjct: 27  MANSELAQ-LARELSELRPICDQIELVRRIEAELADALLMVEEAGEDADMLEMVQAEAGL 85

Query: 96  KLE-----VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
                       Q   L   + D+ +A LEV AG GG E+  +A+ L  MY R+A K  +
Sbjct: 86  LKTRLPEAHSALQIMLLPKDKDDARNAILEVRAGTGGDEAALFASNLFSMYQRFAAKHGW 145

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
             E +E+ +    G K AT  I G + +  LK E GVHR+ R+   ++  R HTS +++ 
Sbjct: 146 NFEVMEVSETGIGGYKEATATISGNDVFARLKFESGVHRVQRVPETEAGGRIHTSAATVA 205

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P   + ++I I ESD R+D +RASG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQH
Sbjct: 206 VLP-EAEDVDIRIDESDLRVDVFRASGPGGQSVNTTDSAVRITHLPTGIVVSQQDEKSQH 264

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLR 327
           KN+A+A  +LRA++Y+ E  + E  A      K ++G G    +IR+Y   P   V D R
Sbjct: 265 KNRAKAMKILRARIYDAERARVE--AQRAAERKGQVGSGDRSERIRTYNF-PQGRVTDHR 321

Query: 328 TNIEKTS 334
            N     
Sbjct: 322 INFTLYK 328


>gi|325186400|emb|CCA20906.1| peptide chain release factor 1 putative [Albugo laibachii Nc14]
          Length = 397

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 114/348 (32%), Positives = 174/348 (50%), Gaps = 17/348 (4%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
            ++R   L+ +   P    +    K L  E   L   ++ I+++Q  L     L E+   
Sbjct: 43  LLERHKSLSEQLYSPQGKMSSFVLKNLSIELAELTPKVTTIQKLQSTLQTIDELSEILAS 102

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQ-------FESLLSGEADSNDAYLEVHAGAGGTESQ 131
               +  +      + ++   E           + L    AD  +  LE+ AG GG E+ 
Sbjct: 103 PSSQNDKELIQLAKEELQEAKEDAIALEKSLTRQLLPRDPADDKNCILEIRAGTGGEEAC 162

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +AN LL++Y + A  R +  + L I   +  G K     I+G   YG  K E GVHR+ 
Sbjct: 163 LFANDLLKLYQKIAIMRNWHFQILSISHTDLGGCKECVCTIQGRGVYGQTKFESGVHRVQ 222

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   D   R HTS  S+ V P   + IE+E++  + RID YRASG+GGQHVNTT+SAVR
Sbjct: 223 RVPINDV--RVHTSAVSVVVLP-EIEEIEMELNPKELRIDVYRASGSGGQHVNTTESAVR 279

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG-- 309
           ITHIPTG+    Q ERSQH+NKA+A ++LRA++Y+    +R+  +   +    +IG G  
Sbjct: 280 ITHIPTGIQAAVQDERSQHQNKAKAMSILRARVYDQMRDQRD--SKRHQLRSLQIGSGDR 337

Query: 310 -RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDL-DDFMKATLAIKK 355
             +IR+Y   P   V D R N+        L+G+L D  + A +  ++
Sbjct: 338 SERIRTYNF-PQSRVSDHRVNVTLYGIERFLNGELMDPLVDALVLDEQ 384


>gi|32491189|ref|NP_871443.1| hypothetical protein WGLp440 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166396|dbj|BAC24586.1| prfB [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 278

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 139/274 (50%), Positives = 191/274 (69%), Gaps = 1/274 (0%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           ++LEE+D   L E ++ +  +   ++  +       + D  + Y+++  G+GG ++QDWA
Sbjct: 1   MSLEENDSKSLLEVNNEIILLNKRMKKIELMCYFFEKNDRCNCYMDIQPGSGGIDAQDWA 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           ++LLRMY +WA++  FKT+ +     E AGIKSAT+   G  AYGWLK E G+HRLVR S
Sbjct: 61  SILLRMYLKWADRNNFKTDIIYKSSSEIAGIKSATVKFLGSYAYGWLKKETGIHRLVRKS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DSN +RHTSF SI+VYP ++D IEI+I+ SD RID YR+SGAGGQHVN T+SAVRITH
Sbjct: 121 PFDSNGKRHTSFCSIFVYPDINDKIEIKINLSDLRIDVYRSSGAGGQHVNRTESAVRITH 180

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           +PT +  QCQ +RSQHKNK +A N L++KLYE EL+K+ +   I E SK++I WG QIRS
Sbjct: 181 LPTKITTQCQSDRSQHKNKEKAINQLKSKLYEFELRKKNKDKKIIEKSKSKIAWGNQIRS 240

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           Y+     +VKDLRT IE      +LDGDL+ F+ 
Sbjct: 241 YIFD-NSIVKDLRTGIESKKIQSILDGDLNIFLN 273


>gi|291397162|ref|XP_002714988.1| PREDICTED: mitochondrial translational release factor 1-like
           [Oryctolagus cuniculus]
          Length = 380

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 109/305 (35%), Positives = 156/305 (51%), Gaps = 9/305 (2%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            L  A   + E +  L +   LL    E+       E +   + I    +      + S 
Sbjct: 63  ELVAAAKLLSEKEQELRETEHLLRDENEDLRRLAENEITLCQKEITQLKQQIVLLLVPSE 122

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+ 
Sbjct: 123 ETDENDLVLEVTAGIGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSEIGGLRHASA 182

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P     I + ++  D RI
Sbjct: 183 SIGGSEAYKLMKFEGGVHRVQRVPKTERQGRIHTSTMTVAILP-QPTEINLVVNPKDLRI 241

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT RASGAGGQHVNTTDSAVRI H+PTG+V +CQQERSQ KN+  A   L AKLY + L+
Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTGIVSECQQERSQLKNREMAMKKLCAKLYSMHLE 301

Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345
             EE +    + K ++   G   +IR+Y   P   V D R N         + GD  LD+
Sbjct: 302 --EETSKRYNARKIQVGTKGRSEKIRTYNF-PQNRVTDHRINKSVHDLEAFMKGDYQLDE 358

Query: 346 FMKAT 350
            +++ 
Sbjct: 359 MIQSL 363


>gi|147818957|emb|CAN67129.1| hypothetical protein VITISV_040170 [Vitis vinifera]
          Length = 1542

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 115/368 (31%), Positives = 174/368 (47%), Gaps = 50/368 (13%)

Query: 2    KLSRQL-NCLGGLFDWDNAVQRLSFLNTKTE-DPHLWQNVI----EAKMLMRERQHLDNA 55
            +L  QL   L G+ +     QRLS +  ++               E     +E + L ++
Sbjct: 1198 ELQPQLSTDLIGIME-----QRLSAIEHRSAYLQDFINRPEASPVEYARANKELRKLRSS 1252

Query: 56   ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI-----KLEVEYKQFESLLSG 110
            I  I E++++  +   L  L  E  +   +   +           K          L   
Sbjct: 1253 IEHITELRNKQKEIDGLKSLMAECSEDKDMLNMAAEELGQAAGEEKRLQNLLLKSLLPKD 1312

Query: 111  EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
            EAD  D  LEV AG GG E+  +A  + +MY ++++K  +K E ++I + +  G K A+ 
Sbjct: 1313 EADERDCILEVRAGTGGEEASLFAMDIFKMYEKYSQKNGWKFEVVDITESDLKGYKEASG 1372

Query: 171  LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
             I G   YG LK E G+HR+                            +++++   D RI
Sbjct: 1373 AISGSGVYGKLKFESGIHRVQ---------------------------VDVQLRNEDLRI 1405

Query: 231  DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
            DTYR+ G+GGQH NTT+SAVRITHIP+G+ V  Q ERSQH NKA+A  +L AKLYE+E  
Sbjct: 1406 DTYRSGGSGGQHANTTNSAVRITHIPSGMTVAIQDERSQHMNKAKALKVLCAKLYEIERS 1465

Query: 291  KREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDF 346
            + ++  +       +IG G    +IR+Y   P   V D R  I   S +DV+ G+ LD F
Sbjct: 1466 RIQKDRSKLRME--QIGSGDRSERIRTYNF-PQGRVTDHRVGITHHSVNDVMQGENLDVF 1522

Query: 347  MKATLAIK 354
            + A L  +
Sbjct: 1523 IDALLLQQ 1530


>gi|301094068|ref|XP_002997878.1| peptide chain release factor 1 [Phytophthora infestans T30-4]
 gi|262109801|gb|EEY67853.1| peptide chain release factor 1 [Phytophthora infestans T30-4]
          Length = 366

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 117/355 (32%), Positives = 181/355 (50%), Gaps = 24/355 (6%)

Query: 17  DNAVQRLSFLNTKTE--DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           D   +R   L  +    D     +  +   L  E   L+  +  ++E+Q +      L E
Sbjct: 10  DLLGRRYDELAHELSHNDGSFSSD--KITNLSIEMAELEPKVIAVRELQSQEKAVEELDE 67

Query: 75  LALEED----------DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
           +  E+                +E  + L+ I           L   EAD   + LE+ AG
Sbjct: 68  MINEQADSDEPDALELRHMAEEERRELLEAIINLEGEVVRLMLPRDEADDKSSILEIRAG 127

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           +GG E+  +A  +L+MY + A  + +K E + I + +  G+K     + G  AYG +K E
Sbjct: 128 SGGDEACLFAGDILKMYQKVALAKGWKFELMSISETDLGGVKECVCSLTGRGAYGRMKFE 187

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   D   R HTS  S+ V P   + +E+EI   D RID YRASGAGGQHVN
Sbjct: 188 SGVHRVQRVPVNDV--RVHTSAVSVVVLP-EAEEVEVEIDPKDLRIDVYRASGAGGQHVN 244

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TT+SAVRITHIPTG+V   Q ERSQH+NKA+A  +LRA++++   +KR+       +  +
Sbjct: 245 TTESAVRITHIPTGIVAAVQDERSQHQNKAKALKILRARVFDGIRRKRDAERQTMRN--S 302

Query: 305 EIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIKK 355
           ++G G    ++R+Y   P   V D R N+       +L+G+ LD+ + A +  ++
Sbjct: 303 QVGSGDRSERVRTYNF-PQSRVSDHRVNVTVFGIERMLNGELLDEIVDALVVDEQ 356


>gi|302847640|ref|XP_002955354.1| hypothetical protein VOLCADRAFT_106758 [Volvox carteri f.
           nagariensis]
 gi|300259426|gb|EFJ43654.1| hypothetical protein VOLCADRAFT_106758 [Volvox carteri f.
           nagariensis]
          Length = 242

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 93/226 (41%), Positives = 140/226 (61%), Gaps = 2/226 (0%)

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            DWA ML RMY RWAE++      ++   GEEAG+KS  L + G   YG+L+ E+G HRL
Sbjct: 1   MDWAEMLERMYLRWAEQQGHGVRLVDRAPGEEAGVKSVELEVAGRYVYGYLRAEKGTHRL 60

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID--TYRASGAGGQHVNTTDS 248
           VR SP+++   R TSF+ + V PV+      ++  ++  ++  T R+ G GGQ+VN  ++
Sbjct: 61  VRNSPFNAKGLRQTSFAGVDVMPVLGPGDLPDLDLNERDLEFSTMRSGGKGGQNVNKVET 120

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
            VRI H+PTG+ V+C QERSQ +N+  A ++L+++L  +  ++             +  W
Sbjct: 121 GVRIVHLPTGISVKCTQERSQSQNREIAMDILKSRLLVVLEEQNARRVAEIRGDLVKAEW 180

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           G+QIR+YV  PY++VKD RT +E +  + VLDGDL DFM A L +K
Sbjct: 181 GQQIRNYVFHPYKLVKDTRTGVETSDVAAVLDGDLADFMAAYLRMK 226


>gi|257069075|ref|YP_003155330.1| peptide chain release factor 1 [Brachybacterium faecium DSM 4810]
 gi|256559893|gb|ACU85740.1| bacterial peptide chain release factor 1 (bRF-1) [Brachybacterium
           faecium DSM 4810]
          Length = 378

 Score =  173 bits (439), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 109/354 (30%), Positives = 172/354 (48%), Gaps = 15/354 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                +  + L     DP L ++   A+ + R    L+  +     ++    D   + EL
Sbjct: 10  LAPLRREHAALQEAMADPALHEDAARARRVGRRYAELEGVLDAAARLEATAADLETVHEL 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
               +    L   +  L+    +     +         D+ D  LE+ AGAGG ES  +A
Sbjct: 70  EALGEGDEELAREAAQLRERLEQEREHLEDLLAPRDPDDARDVILEIKAGAGGEESALFA 129

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-------AYGWLKGEQGV 187
             +LRMY  +AE + ++ E L   + E  G K  T+ I            Y  LK E GV
Sbjct: 130 AEMLRMYRAYAESQGWRVEVLTSAESELGGFKDVTVAIAARGAGGSGSGVYAHLKHEAGV 189

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE-----ISESDCRIDTYRASGAGGQH 242
           HR+ R+   +S  R HTS   + V P  D++ E E     ++ ++ RID +R+SG GGQ 
Sbjct: 190 HRVQRVPVTESQGRIHTSAVGVLVLPEADEADESELLAEAMAPANLRIDVFRSSGPGGQS 249

Query: 243 VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
           VNTTDSAVRITH+PTGVVV CQ ++SQ +N+ QA  +LR +L +    ++E  ++    S
Sbjct: 250 VNTTDSAVRITHLPTGVVVSCQDQKSQLQNREQALRILRTRLLDARRAEQEAQSSAARRS 309

Query: 303 KTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +   +    +IR+Y   P   V D RT  +  + + VL GDL+D + ++   ++
Sbjct: 310 QVRTVDRSERIRTYNF-PESRVADHRTGYKAGNLAQVLSGDLEDLIASSREAER 362


>gi|156389000|ref|XP_001634780.1| predicted protein [Nematostella vectensis]
 gi|156221867|gb|EDO42717.1| predicted protein [Nematostella vectensis]
          Length = 273

 Score =  173 bits (438), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 107/249 (42%), Positives = 153/249 (61%), Gaps = 9/249 (3%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           +   EAD NDA LEV AG GG E+  +A+ +  MY R+A  +K+K + L+I   +  G K
Sbjct: 6   IPKDEADENDAILEVRAGTGGQEASLFASEMFIMYQRFAAFKKWKFDILDIARSDTGGYK 65

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            A+  I G   +G +K E GVHR+ R+   ++  R HTS  ++ V P     +++ IS +
Sbjct: 66  EASASISGYGVFGKMKFEVGVHRVQRVPVTEAQGRVHTSTMTVAVLP-QPQEVDVIISPN 124

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D +IDT+RASGAGGQHVNTTDSAVRITHIP+G+VV  Q+ERSQ KNKA+A  +LRA+LY+
Sbjct: 125 DLKIDTFRASGAGGQHVNTTDSAVRITHIPSGMVVSSQEERSQFKNKAKAMQVLRARLYD 184

Query: 287 LELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD- 342
           L  Q++E  +    + +T+IG      +IR+Y   P   V D R  +   +    L+G  
Sbjct: 185 L--QRQEADSARVHARRTQIGTAERSEKIRTYNF-PQGRVTDHRIGMTSHTVDKFLEGGV 241

Query: 343 -LDDFMKAT 350
            L+D + A 
Sbjct: 242 LLEDMIDAL 250


>gi|224130870|ref|XP_002320945.1| predicted protein [Populus trichocarpa]
 gi|222861718|gb|EEE99260.1| predicted protein [Populus trichocarpa]
          Length = 358

 Score =  173 bits (438), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 112/348 (32%), Positives = 175/348 (50%), Gaps = 15/348 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R + L      P    +  E     +E + L  ++  I  ++ +  +   L  L
Sbjct: 5   LSAIEHRSACLENFMNQPE--ASPTEFSRANKELRKLRGSMELITYLRTKQKEIDGLRSL 62

Query: 76  ALEEDDCSILQETSDN-----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             E  +   + + ++      ++  K          L   +AD  D  LEV AG+GG E+
Sbjct: 63  MTECPEDKDMLDMANEELSQAMEEEKRLQNLLLKSLLPRDDADERDCILEVRAGSGGEEA 122

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  + +MY R+++   +K E + I + +  G K A+  I G + +G LK E G+HR+
Sbjct: 123 SLFAMDIFKMYERFSQNNGWKFEVVYITESDLKGYKEASAAISGADVFGKLKFESGIHRV 182

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +   R HTS  S+ + P   D +++++   D RIDTYR+ G+GGQH NTT+SAV
Sbjct: 183 QRVPVTEKLGRVHTSAVSVAILPQ-ADEVDLQLRNEDLRIDTYRSGGSGGQHANTTNSAV 241

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+ V  Q ERSQH NK++A  +L AKLYE+E  +     +       +IG G 
Sbjct: 242 RITHLPTGITVSIQDERSQHMNKSKALKVLCAKLYEMERSRL--HMSRSRLRSEQIGSGD 299

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354
              +IR+Y   P   V D R  I   S +DV+ G+ LD F+ A L  +
Sbjct: 300 RSERIRTYNF-PQGRVTDHRVGITHHSINDVMQGESLDVFIDALLLQQ 346


>gi|126642199|ref|YP_001085183.1| peptide chain release factor 1 [Acinetobacter baumannii ATCC 17978]
          Length = 296

 Score =  173 bits (438), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 102/258 (39%), Positives = 147/258 (56%), Gaps = 6/258 (2%)

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           +          +     DSN AYLE+ AG GG E+  ++  L RMY+++AE + ++ E L
Sbjct: 24  EELESQLNILMIPKDPNDSNAAYLEIRAGTGGDEAAIFSGDLFRMYSKYAESQGWRIEVL 83

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
             ++GE  G K     + G   YG LK E G HR+ R+   +S  R HTS  ++ + P +
Sbjct: 84  SENEGEHGGFKEVICRVDGDGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEI 143

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           D    +EI+ +D RIDTYRASGAGGQH+N TDSAVRITHIPTG VV+CQ+ERSQHKNKA+
Sbjct: 144 DVDTNVEINPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGTVVECQEERSQHKNKAK 203

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEK 332
           A  +L ++L   +       A   E  +  +G G    +IR+Y   P   + D R N+  
Sbjct: 204 AMALLVSRLENAKR--AAADAATSEMRRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTL 260

Query: 333 TSPSDVLDGDLDDFMKAT 350
                +++GDL + + + 
Sbjct: 261 YKLDAIMEGDLTELLDSL 278


>gi|145348023|ref|XP_001418457.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578686|gb|ABO96750.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 373

 Score =  173 bits (438), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 120/350 (34%), Positives = 178/350 (50%), Gaps = 17/350 (4%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI---KEIQDRLCDNLILL 73
           + A++R   L        +  ++       +E   ++         K+++        L+
Sbjct: 22  EAALRRREELIALISRQGV--DIDRVVEANKELSRIEPIAEQYEVVKKLRAEKASLEELV 79

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQ-----FESLLSGEADSNDAYLEVHAGAGGT 128
             A    D   L E +    R        Q        L   +AD   A LEV AGAGG 
Sbjct: 80  RDASSGGDSKELAELAREELRAVDIDLPDQELALQLLFLPHDDADDRGAILEVRAGAGGD 139

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +A  L RMY   A K  ++ + L + + +  G++ A+  I G   +G LK E GVH
Sbjct: 140 EAALFAAELFRMYALHARKSGWRFDTLNVSETDGKGVREASAEILGKGVFGRLKFESGVH 199

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ R+   ++  R HTS +SI V P   + +E++I E D RIDT RASGAGGQHVNTT+S
Sbjct: 200 RVQRVPETETQGRVHTSTASIAVLPH-AEEVEMDIKEEDVRIDTMRASGAGGQHVNTTNS 258

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
           AVR+TH PTG+ V  Q ERSQHKNKA+A+++L+A+LY+LE +K  +  +   S  + IG 
Sbjct: 259 AVRLTHAPTGIQVVIQDERSQHKNKAKAFSVLKARLYDLEREKMAKERSELRS--SLIGT 316

Query: 309 G---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           G    +IR+Y       VKD R     +  + ++DG L D +   L  K+
Sbjct: 317 GDRSERIRTYNFA-QGRVKDHRVEGTISDVNALMDGFLLDEITEKLKRKR 365


>gi|210076204|ref|XP_504279.2| YALI0E22759p [Yarrowia lipolytica]
 gi|199426952|emb|CAG79876.2| YALI0E22759p [Yarrowia lipolytica]
          Length = 389

 Score =  173 bits (438), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 84/334 (25%), Positives = 157/334 (47%), Gaps = 11/334 (3%)

Query: 24  SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCS 83
                    P+  ++  + K L+ +   L      +   ++ +     L+ +  + +   
Sbjct: 44  KEYEALQASPN--EDQFKDKKLIAKINLLGQVTHELDSYRNSIVQYDELMSMCDDPELKK 101

Query: 84  ILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
             ++    ++   +  ++  +   L +         +E+  G GG E+  + + LL MYT
Sbjct: 102 DAEDEIPTVEAEAEKAIKKLETLLLPTHPYGDIGCIIEMRPGIGGEEACLFTDNLLNMYT 161

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
            +A++  +  +   +   ++ GI    L + G  +Y  L+ E GVHR+ R+   +S+ R 
Sbjct: 162 GYADEMGWPYQITNVTRNDKGGITEVILSVDGEGSYNMLQHEGGVHRVQRVPVTESSGRV 221

Query: 203 HTSFSSIWVYPVVDDS----IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           HTS +++ V P + +S     +I+ +  + RID  RA GAGGQHVN T+SAVR+ HIPT 
Sbjct: 222 HTSAAAVIVLPQISESSVAADDIQFAPGEVRIDVMRAQGAGGQHVNKTESAVRLVHIPTK 281

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQIRSYVL 317
            +V  Q  RSQ +NK  A+ +LR +L E + +++   +    +S+ +      +IR+Y  
Sbjct: 282 TMVVMQNSRSQRQNKEMAFMILRGRLAEQKRREQAAKSKNARTSQVSATDRSDKIRTYNF 341

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKAT 350
                V D R      +   V+ G  LD  ++A 
Sbjct: 342 H-QNRVTDHRCGY-SGNLDVVMSGKKLDAVLEAL 373


>gi|194246573|ref|YP_002004212.1| Bacterial peptide chain release factor 1 [Candidatus Phytoplasma
           mali]
 gi|193806930|emb|CAP18362.1| Bacterial peptide chain release factor 1 [Candidatus Phytoplasma
           mali]
          Length = 347

 Score =  172 bits (436), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 96/349 (27%), Positives = 169/349 (48%), Gaps = 17/349 (4%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +FD      Q+   L           N  +   L +E  +L   +    E  +   + L 
Sbjct: 1   MFDKLKKINQKYLNLQKLILLET---NSKKKVQLFKEIGNLKEIVDNYNEYLNLEKELLK 57

Query: 72  LLELALEEDDCSI------LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           +      + + +        QE     ++I  E++  ++        D+ +  +++   A
Sbjct: 58  IKHFIQNDSNNNDDLLNLAFQEQEILNEKIHNELKKIKYLLFPLEPEDNKNVIMQIKGAA 117

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  ++  L RMY ++AE + +K E L +    + GI S   ++ G   Y +LK E 
Sbjct: 118 GGDEANLFSADLFRMYCKYAELKNWKLEILNLMTNIKGGISSVEFILSGKKVYYFLKYES 177

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +   R HTS S++ V P   D I+ +I   D R DT+ +SG GGQ VNT
Sbjct: 178 GVHRVQRVPTTEVQGRIHTSTSTVLVMP-EVDEIDFKIDWKDIRFDTFNSSGPGGQSVNT 236

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T SAVR+TH+P+ + V CQ  +SQH+NK +A+++L+A++Y+   ++  E  N  +  K  
Sbjct: 237 TKSAVRLTHLPSNISVACQIGKSQHENKKKAFSLLKARIYDKIHKQNMEKEN--KKRKFL 294

Query: 306 IG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +G      +IR+Y   P   + D R ++       +++G LD  ++  +
Sbjct: 295 VGDGQRSEKIRTYNY-PQNRITDHRISLNLKKLDIIMEGKLDFIIEPLI 342


>gi|167470794|ref|ZP_02335498.1| peptide chain release factor 1 [Yersinia pestis FV-1]
          Length = 303

 Score =  172 bits (436), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 105/295 (35%), Positives = 155/295 (52%), Gaps = 3/295 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +     KE +    D      +
Sbjct: 9   LEALQERHEEVLAYLGDASVIADQDRFRALSREYAQLTDVTRCFKEWRSAQDDIEAAEMM 68

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   +  +E      R +   +  Q   L     D  D +LE+ AG GG E+  +A
Sbjct: 69  LDDLEMREMAQEELKIAKARSEELEQQLQVLLLPKDPDDERDCFLEIRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             + RMY+R+AE R++K E +   +GE  G K     I G   +G LK E G HR+ R+ 
Sbjct: 129 GDMFRMYSRYAETRRWKVEIMSASEGEHGGYKEIIAKISGDGVFGQLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   EI+  D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVMPAIPEAELPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           IPTG+VV+CQ ERSQHKNKA+A ++L A++   E+QKR+         +  +G G
Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQ--LAEASERRNLLGTG 301


>gi|50286945|ref|XP_445902.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525208|emb|CAG58821.1| unnamed protein product [Candida glabrata]
          Length = 405

 Score =  172 bits (435), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 106/343 (30%), Positives = 163/343 (47%), Gaps = 21/343 (6%)

Query: 19  AVQRLSFLNTKTE---DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             + L+ L  +     D  +     +   LM     L +     KE      +   ++++
Sbjct: 53  VSKELAELEKQISNGYDEDV---QRKYNSLM----SLQDVYDRYKEQLGNYRELKEMIDV 105

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
                + +  +   + +  +K   +      +           LE+  G GG+E+  +A 
Sbjct: 106 DKSLAEEAAAE-LHELVPNLKKTTQDLLHRLIPPHPFAEKACMLELRPGVGGSEAMIFAK 164

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            LL MY  +A  +K+K   + I + E   GI  A L I  P  Y  LK E GVHR+ RI 
Sbjct: 165 DLLNMYIGYAHNKKWKHHIVSIRENEAGSGIMDAVLAIDEPGTYNILKYEAGVHRVQRIP 224

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDS------IEIEISESDCRIDTYRASGAGGQHVNTTDS 248
             +S  R HTS +++ V P + D        E      + RID  RASG GGQHVNTT+S
Sbjct: 225 ATESKGRTHTSTAAVVVLPQLGDEGKDLDAFERSFKPEEIRIDVKRASGKGGQHVNTTES 284

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIG 307
           AVR+THIPTG+++  Q ERSQH+NKA+A+++LR+KL ELE Q++ E        + T + 
Sbjct: 285 AVRLTHIPTGIMIHMQDERSQHRNKAKAFSILRSKLAELEQQQKAEKERQVRKEQVTTMD 344

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKA 349
              +IR+Y       + D R  +       V+ G+ LDD + A
Sbjct: 345 RSDKIRTYNFS-QNRITDHRCGLNLYDLEGVISGERLDDVINA 386


>gi|145347488|ref|XP_001418196.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578425|gb|ABO96489.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 278

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 107/260 (41%), Positives = 162/260 (62%), Gaps = 2/260 (0%)

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
             ++  +   LL G+ D+  A L+++AGAGG ++QDW  ML RMY  W EKR F   A E
Sbjct: 14  KALDAWELRRLLGGKYDAFGAVLQIYAGAGGLDAQDWTEMLERMYLGWCEKRGFAVRATE 73

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP--V 214
             +GE  G+K+ATL ++G  AYG+L  E+G HRLVR SP++ ++ R TSF+++ V P   
Sbjct: 74  RLEGEGGGLKTATLEVEGRYAYGYLSSEKGTHRLVRQSPFNKDAARQTSFAAVDVIPLFE 133

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
            D    +++ ++D  + T R+ GAGGQ+VN  ++AVRI HIPTG+ V+ ++ R+Q  N+ 
Sbjct: 134 EDMEEVVKVPDTDLEVTTMRSGGAGGQNVNKVETAVRIKHIPTGITVKAEEHRTQQLNRQ 193

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
            A   ++AKL  L  + R            +  WG+QIR+YVL PY++VKD+RT +E + 
Sbjct: 194 AAMLRIKAKLTALAEEARVADIAELRGDIVKAEWGQQIRNYVLHPYKLVKDVRTGVETSD 253

Query: 335 PSDVLDGDLDDFMKATLAIK 354
            + VL+G LD++M   L  K
Sbjct: 254 ANKVLNGALDEYMNGYLRWK 273


>gi|255716670|ref|XP_002554616.1| KLTH0F09482p [Lachancea thermotolerans]
 gi|238935999|emb|CAR24179.1| KLTH0F09482p [Lachancea thermotolerans]
          Length = 400

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 100/347 (28%), Positives = 153/347 (44%), Gaps = 21/347 (6%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +   + L  L           +V       ++   L   +         +     L ++ 
Sbjct: 40  EKYAEELKALEKWMAKGEGTFDVER----QKKFSRLCAVVDSFHRYSREIELLKDLQDMM 95

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTESQDWA 134
            ++       +      R +LE         L            LE+  G GG E+  +A
Sbjct: 96  KDDPSLRDEAQQEMAEIRPQLEKTSSSLLGQLLPPHPFADRPCILEIRPGVGGIEAMIFA 155

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
             LL MY  +A  +++K   +     E   GI  A L I  P +Y  L+ E GVHR+ RI
Sbjct: 156 QDLLGMYINYAHNKRWKYHIISQSANESGSGIVDAILSIDEPGSYDKLRFEAGVHRVQRI 215

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIE-------IEISESDCRIDTYRASGAGGQHVNTT 246
              ++  R HTS +++ V P + +  E             + RID  RA G GGQHVNTT
Sbjct: 216 PATETKGRTHTSTAAVVVLPQMAEDNEKEAESYERTFKPDEIRIDVMRARGKGGQHVNTT 275

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVR+TH P+G+V+  Q ERSQHKNKA+A+ +LRA+L E+E + +EE A      K ++
Sbjct: 276 DSAVRLTHYPSGIVINMQNERSQHKNKAKAFAILRARLAEIEQKAKEEKARAA--RKGQV 333

Query: 307 G---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKA 349
                  ++R+Y   P   + D R          ++ G+ LDD + A
Sbjct: 334 STTDRSDKVRTYNF-PQNRITDHRCGFNLHDMEGIMAGERLDDVIDA 379


>gi|226356572|ref|YP_002786312.1| peptide chain release factor 1 [Deinococcus deserti VCD115]
 gi|259585218|sp|C1CWJ1|RF1_DEIDV RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226318562|gb|ACO46558.1| putative Peptide chain release factor 1 (RF-1) [Deinococcus deserti
           VCD115]
          Length = 366

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 99/349 (28%), Positives = 151/349 (43%), Gaps = 13/349 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                     +     DP    +      L R  + L   ++ ++E +    D     EL
Sbjct: 5   LSELAAEFGMVERALGDPAALADPQAYTRLTRRHRELLPLVTLLREREALESDLRGAQEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLE-VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + Q           +     +   L +   D  +  LE+ AGAGG E+  + 
Sbjct: 65  LSDPDMRELAQNEITEATARLEQLGAELEVLLLPTDPDDLKNVILELRAGAGGAEAGLFV 124

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE R  +   LE  + +  G       I G  A+   K E+GVHR+ R+ 
Sbjct: 125 MDLLRMYTRYAEDRGLRLNVLEASESDLGGASKVVAEISGEFAFRAFKWERGVHRVQRVP 184

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  +      +  S+ RID +R+ GAGGQ VNTTDSAVR  +
Sbjct: 185 ATESQGRIHTSTVTVAVLPEAEQGEVQ-LDLSEVRIDVFRSQGAGGQGVNTTDSAVRAVY 243

Query: 255 I---PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
               P  ++V CQ  RSQ KN+ +A  +L ++L E E   R+  A        ++G G +
Sbjct: 244 RAGTPDEIMVVCQDGRSQIKNREKALVVLASRLAERERAARD--AQEARDRAAQVGSGER 301

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTS--PSDVLDGDLDDFMKATLAIKK 355
              IR+Y   P   V D R   +  +     V+ G L   + A    ++
Sbjct: 302 SEKIRTYNY-PQNRVTDHRLEGDSKNHPLDSVMAGGLGPVVSALARDER 349


>gi|260944632|ref|XP_002616614.1| hypothetical protein CLUG_03855 [Clavispora lusitaniae ATCC 42720]
 gi|238850263|gb|EEQ39727.1| hypothetical protein CLUG_03855 [Clavispora lusitaniae ATCC 42720]
          Length = 406

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 99/346 (28%), Positives = 157/346 (45%), Gaps = 20/346 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +  S L  +        +             + + +      Q  + +   LLE+
Sbjct: 48  VETMTKEFSVLEKQMSSNEF--DQDTVVK----FSSISSVLDKYHTYQQDMENLSSLLEI 101

Query: 76  ALEEDDCSILQETSDN----LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E+ D  +++E ++     + R+       +   L      +  A LE+  G GG+E+ 
Sbjct: 102 INEDLDAELVEEANEELKEVVPRVVKASSSLKKRLLPPIVHSNKPAILELRPGVGGSEAA 161

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +   LL MY  +A    +  + L         +  A + I  P AY  L+ E GVHR+ 
Sbjct: 162 LFTQDLLNMYINFANYMSWPYKILSESHSSNGFLNEAIISIDAPGAYNVLRHESGVHRVQ 221

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRIDTYRASGAGGQHVN 244
           RI   +S  R HTS +++ V P + D         E   +  + RIDT R+ G GGQHVN
Sbjct: 222 RIPATESKGRIHTSTAAVVVLPKMSDGTEQSLKEDERSFAPGEIRIDTMRSGGKGGQHVN 281

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK- 303
           TTDSAVRI HIPTG++V  Q ERSQ KNKA+A+++LR++L ++E +K         S + 
Sbjct: 282 TTDSAVRIVHIPTGIMVVQQDERSQPKNKAKAFSILRSRLAQMEREKEIAEQKKLRSDQV 341

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMK 348
           T      +IR+Y   P   V D R N         + G  L++ ++
Sbjct: 342 TTTDRSDKIRTYNY-PQNRVTDHRCNYSVHDLPGFMAGPKLEEMIE 386


>gi|145627802|ref|ZP_01783603.1| peptide chain release factor 2 [Haemophilus influenzae 22.1-21]
 gi|144979577|gb|EDJ89236.1| peptide chain release factor 2 [Haemophilus influenzae 22.1-21]
          Length = 183

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 113/182 (62%), Positives = 141/182 (77%), Gaps = 1/182 (0%)

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           + G  A+GWL+ E G+HRLVR SP+DSN+RRHTSFS+ +VYP +DD I+IEI+ +D RID
Sbjct: 1   MSGEYAFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEIDDDIDIEINPADLRID 60

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            YRASGAGGQHVN T+SAVRITH+P+G+VVQCQ +RSQHKNK QA   L+AKLYELELQK
Sbjct: 61  VYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQK 120

Query: 292 REEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           +       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDGDLD F++A+L
Sbjct: 121 KNADKQAMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDRFIEASL 179

Query: 352 AI 353
             
Sbjct: 180 KA 181


>gi|217963389|ref|YP_002349067.1| peptide chain release factor 2, programmed [Listeria monocytogenes
           HCC23]
 gi|217332659|gb|ACK38453.1| peptide chain release factor 2, programmed [Listeria monocytogenes
           HCC23]
          Length = 304

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 139/287 (48%), Positives = 187/287 (65%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              R++ L  +  DP+ W +   A+ ++ E             +++      I LEL  E
Sbjct: 1   MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D  + +E   +++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLL
Sbjct: 61  EADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLL 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS
Sbjct: 121 RMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDS 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
           + RRHTSF S+ V P +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G
Sbjct: 181 SGRRHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSG 240

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           +VV CQ ERSQ KN+ QA  ML+ KLY+ E +++E         + +
Sbjct: 241 IVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKK 287


>gi|221128345|ref|XP_002163029.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 400

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 102/331 (30%), Positives = 174/331 (52%), Gaps = 10/331 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++ + +   LN K  D        E K    E   +  A+     +  +  + + L  L
Sbjct: 43  IEDVMFKYKQLNEKLLDSKNLT-PTEIKNYSSECHRMKPAVEIYNLLLKKREEIIELAAL 101

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGAGGTESQDW 133
            ++  +     +   +  ++ +     +     +   + DSN+A +E+ AG GG E+  +
Sbjct: 102 GIDNKEMKEFVQEEISACQVCIADLELRLLDSIIPKDKDDSNNAIMEIRAGTGGREAAIF 161

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           A  +L MY +++   ++K E L+  +  + G+K  ++ I G   +G LK E GVHR+ R+
Sbjct: 162 AAEMLSMYDKYSSSNQWKFEVLDESESTDGGLKEVSVNIIGSGVFGKLKHEIGVHRVQRV 221

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              +S  R HTS  ++ V P   +SI++ ++  D ++DT+R+SGAGGQHVNTTDSAVR+T
Sbjct: 222 PITESLGRVHTSTVTVAVLP-QPESIDVVLNMKDVKVDTFRSSGAGGQHVNTTDSAVRLT 280

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           HIP+G+VV  Q +RSQ +NK++A  +L A+LY+ E  +  +     E  +T+IG G    
Sbjct: 281 HIPSGLVVAVQSQRSQIENKSRALKILSAQLYDFERTRVVQER--VELRRTQIGSGHRSE 338

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           +IR+Y   P   + D R     +  SD + G
Sbjct: 339 RIRTYNF-PQDRITDHRIGETLSGLSDFMLG 368


>gi|254572401|ref|XP_002493310.1| hypothetical protein [Pichia pastoris GS115]
 gi|238033108|emb|CAY71131.1| hypothetical protein PAS_chr3_1249 [Pichia pastoris GS115]
 gi|328352673|emb|CCA39071.1| Peptide chain release factor 1 [Pichia pastoris CBS 7435]
          Length = 405

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 100/343 (29%), Positives = 158/343 (46%), Gaps = 18/343 (5%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              +L  L +K      +          R+   L + +    E      +   L  +  E
Sbjct: 48  LSSQLKDLESKLSSSDEFSYQD-----SRDYSLLVSTVETYNEFLRETENVEELQRMLHE 102

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTESQDWANM 136
           +       E+       KL+    + ++ L    +       LE+  G GG+E+  +   
Sbjct: 103 DPSLKEEIESELTQAAPKLKRLTSKLKTKLLPPHEFADKPCILELRPGIGGSEANLFTED 162

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
           LL MY ++A+  ++  E +  +      G+  A ++I  P +Y  L+ E GVHR+ R+  
Sbjct: 163 LLSMYEKYAQHHRWSYEIISRNPHPSGNGLVDAAIVINEPGSYNRLRFEAGVHRVQRVPA 222

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSI---EIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
            +S  R HTS +++ V P +D+            D RID  RASG+GGQHVNTT+SAVR+
Sbjct: 223 TESKGRTHTSTAAVVVLPKIDEDDTSLNRTFLPDDIRIDVMRASGSGGQHVNTTESAVRV 282

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WG 309
           THIP+G+VV  Q ERSQHKNKA+A  +L+A+L E E    E+        K ++      
Sbjct: 283 THIPSGIVVLIQDERSQHKNKAKALTILKARLAEKER--VEKEEKELAERKGQVSSTDRS 340

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATL 351
            +IR+Y       + D R      +    L+G  LD+ + A L
Sbjct: 341 DKIRTYNFS-QNRITDHRCGYSLHNVEGCLNGYKLDEIIDALL 382


>gi|169628533|ref|YP_001702182.1| peptide chain release factor 1 [Mycobacterium abscessus ATCC 19977]
 gi|238688924|sp|B1MLV1|RF1_MYCA9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169240500|emb|CAM61528.1| Probable peptide chain release factor 1 (RF-1) [Mycobacterium
           abscessus]
          Length = 356

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 113/332 (34%), Positives = 166/332 (50%), Gaps = 9/332 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D  +   + L  +  DP L  +   A+   R    L   ++  +++     D     EL
Sbjct: 7   IDAMLAEHAELEKQLADPALHADAAAARKAGRRFAMLSPIVATHRKLATARDDLATAREL 66

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           + ++   +      ++                     D +D  LEV +G GG ES  +A 
Sbjct: 67  SADDPSFADEVTELESSIAELETQLSDML--APRDPHDGDDILLEVKSGEGGEESALFAA 124

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI-----KGPNAYGWLKGEQGVHRL 190
            L RMY R+AE+  +K   L+  + +  G K ATL I          +  LK E GVHR+
Sbjct: 125 DLARMYIRYAERHGWKVTVLDETESDLGGYKDATLAIASKGDSADGVWSRLKFEGGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +S  R HTS + + VYP  ++  EI+I ESD RID YR+SG GGQ VNTTDSAV
Sbjct: 185 QRVPVTESQGRVHTSAAGVLVYPEPEEVEEIQIDESDLRIDVYRSSGKGGQGVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWG 309
           RITH+PTG+VV CQ ERSQ +NKA+A  +L A+L  L  ++ +  A+ G +S+   +   
Sbjct: 245 RITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQALAEEQAQADASAGRASQIRTVDRS 304

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
            +IR+Y   P   + D R   +  +   VLDG
Sbjct: 305 ERIRTYNF-PENRITDHRVGFKAHNLDQVLDG 335


>gi|302785656|ref|XP_002974599.1| hypothetical protein SELMODRAFT_101651 [Selaginella moellendorffii]
 gi|300157494|gb|EFJ24119.1| hypothetical protein SELMODRAFT_101651 [Selaginella moellendorffii]
          Length = 386

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 116/350 (33%), Positives = 183/350 (52%), Gaps = 23/350 (6%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           +   R + L+    +P +  +  E   + +E + LD ++  IK ++ +  + + L EL  
Sbjct: 26  SIEDRHACLSKALLEPGIASD--ELIKMNKELRKLDYSVDMIKALRAKEKEVIGLKELVK 83

Query: 78  EEDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA--------G 124
           E  +   ++           + ++        + +   EADS    LE           G
Sbjct: 84  ESVEDEEMRRLASGELQTATREVRDAQHDVLLKLIPKDEADSRGCILEASCLICFIYLLG 143

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           AGG E+  +A+ L +MY ++A    ++ E L I   +  G K A+ +I G + YG LK E
Sbjct: 144 AGGDEASIFASDLFKMYEKYAANNSWRFEVLSITTTDTRGYKEASAVISGDDVYGALKFE 203

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   +   R HTS +S+ + P   + +++EI   + +IDTYRA GAGGQHVN
Sbjct: 204 SGVHRVQRVPVTEKAGRIHTSTASVAILP-EANEVDVEIRNDEIKIDTYRAGGAGGQHVN 262

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TT SAVR+TH PTG+VV  Q ERSQHKNKA+A ++L A+LYELE  +    A+  E  + 
Sbjct: 263 TTCSAVRVTHAPTGIVVAIQDERSQHKNKAKALSILYARLYELERSR--AAASRSELRQD 320

Query: 305 EIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKAT 350
           +IG      +IR+Y   P   V D R  + + S   +++G  L+ F+ A 
Sbjct: 321 QIGSSDRSERIRTYNF-PQGRVTDHRVGVTQHSIEQIMEGIGLEIFVNAL 369


>gi|40062641|gb|AAR37562.1| peptide chain release factor 1 [uncultured marine bacterium 313]
          Length = 358

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 106/335 (31%), Positives = 166/335 (49%), Gaps = 14/335 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF---IKEIQDRLCDNLIL 72
               V     L  +     +     +     +E   +   I       + +    +   +
Sbjct: 7   IQQIVNTYKTLEKELASSDIG--KKDFVKKSKEYSGIGEIIDEAKGYLDFEKEKLELDKI 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGTES 130
           +E    + +   L ++  N    K +   K  +       EADS +A +E+ AG GG E+
Sbjct: 65  IEDKKSDKEMIQLVKSELNELLKKKQSYEKILKVYLLPKDEADSKNAIVEIRAGTGGLEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +   L +MY +    +K+  E + +   E  G K   LLIKG N Y +LK E GVHR+
Sbjct: 125 TLFVADLYKMYEKVCLNKKWSFEIINLSKSEAGGFKEVILLIKGANIYSFLKFESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++++I + D RID +R++GAGGQ VNTTDSAV
Sbjct: 185 QRVPETETQGRVHTSAATVAVLP-EAEEVDVKIEDKDLRIDVFRSTGAGGQSVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG+VV  Q E+SQHKN+A+   +LR+++YE E    ++        K +IG G 
Sbjct: 244 RITHIPTGIVVTNQDEKSQHKNRAKGMKILRSRIYESER--EKKEKERSRDRKNQIGTGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
              +IR+Y   P   V D R N+      + L+GD
Sbjct: 302 RSERIRTYNF-PQGRVTDHRINLTIHKLQEFLNGD 335


>gi|261749210|ref|YP_003256895.1| peptide chain release factor 1 [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497302|gb|ACX83752.1| peptide chain release factor 1 [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 364

 Score =  169 bits (429), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 101/359 (28%), Positives = 182/359 (50%), Gaps = 21/359 (5%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           +  +  +  ++   +    +      PH+  N  + K L+++ + L+  ++  ++ + +L
Sbjct: 1   MKKISLIKKFEILEKEFHGIGNSIIQPHIVSNQKKYKTLLKKYRKLEKVVNIYEKYKKKL 60

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES-----------LLSGEADSN 115
                   +   + D  + +       +I  ++   + +S             + E D  
Sbjct: 61  TALQEANSILKNDSDPEMKEIAYLEKNKILEDLSNIEKKSDDLLFSTSPTGRENLENDHR 120

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI--- 172
           +A +E+ +G GG E+  +   +LRMY  + ++  +K + +    G   G K   L +   
Sbjct: 121 NAIVELRSGTGGDEACLFVEDILRMYIMYFKQVGWKYKIIHAQKGGIQGYKEIILDVSGK 180

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G   YG LK E GVHR+ RI   +S  R HTS  ++ V P     IE++I  SD + DT
Sbjct: 181 EGEGVYGNLKFESGVHRVQRIPKTESQGRVHTSAITVAVLP-EIKDIEMKIHLSDIKKDT 239

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +R+SG+GGQHVN T+SAVR+THIPT + V+CQ+ERSQHKN  +A N+LR+++Y+ E +KR
Sbjct: 240 FRSSGSGGQHVNKTESAVRLTHIPTKITVECQEERSQHKNFEKAMNVLRSRIYQNEKEKR 299

Query: 293 EEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +  +I    K+ +  G +   IR+Y   P   V D R +    +    ++G++ + + 
Sbjct: 300 FKERSI--KRKSLVSTGDRSVKIRTYNY-PKGRVTDHRIHKSIYNLVGFMNGNIQEMIN 355


>gi|159474546|ref|XP_001695386.1| hypothetical protein CHLREDRAFT_49544 [Chlamydomonas reinhardtii]
 gi|158275869|gb|EDP01644.1| hypothetical protein CHLREDRAFT_49544 [Chlamydomonas reinhardtii]
          Length = 336

 Score =  169 bits (429), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 108/309 (34%), Positives = 156/309 (50%), Gaps = 15/309 (4%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           + + RE   L         +     +   L  LA + D         +     +   +  
Sbjct: 8   RDVGREYARLQPLAHGYSRLLQVRAELSDLAGLARDPDAGVRAMAADEAAALRQEAADLT 67

Query: 103 Q---FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR-----WAEKRKFKTEA 154
           +      +    + S  A LEV AGAGG E+  +A+ LL MY R         R +  E 
Sbjct: 68  RRLLLALVPPEPSASRPALLEVRAGAGGAEAALFASELLAMYRRLAQARTCASRGWTWEV 127

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           LE+ + E  G++ AT+   G   YG L GE GVHR+ R+   ++  R HTS +++ V P 
Sbjct: 128 LELGNSEHGGVRHATVAGAGEGVYGVLSGESGVHRVQRVPVTEAGGRLHTSTAAVVVLPQ 187

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
             D +++ + E D R++T RASGAGGQHVN TDSAVRITH+PTG+VV CQ ERSQH N+A
Sbjct: 188 -ADEVDVRLREEDLRVETMRASGAGGQHVNVTDSAVRITHLPTGLVVSCQNERSQHLNRA 246

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIE 331
            A  +LR++LY+LE Q+R      GE     +  G    ++R+Y   P   V D R ++ 
Sbjct: 247 AALKVLRSRLYDLEAQRR--ARQAGEQRSALVASGDRSERVRTYNF-PQGRVTDHRIHLT 303

Query: 332 KTSPSDVLD 340
                 VL+
Sbjct: 304 VHDLGSVLE 312


>gi|307069624|ref|YP_003878101.1| putative peptide chain release factor RF-1 [Candidatus Zinderia
           insecticola CARI]
 gi|306482884|gb|ADM89755.1| putative peptide chain release factor RF-1 [Candidatus Zinderia
           insecticola CARI]
          Length = 345

 Score =  169 bits (428), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 94/324 (29%), Positives = 165/324 (50%), Gaps = 6/324 (1%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           L  K +D +++ N+ + K + +    +   I +    +  +       +   +++  +I 
Sbjct: 23  LLKKIQDKNIFNNLKKYKKICKNIFKIRPIIKYYNLYKKEINKIKENKKFINDKEFKNIA 82

Query: 86  QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
            +     +     +  K  ++++  +  +N   LE+ A +GG E+  +   L +MY  ++
Sbjct: 83  LDEIKKCKDKIFFLNKKIEKNIIINKNINNKILLEIRAASGGEEAALFVKDLYKMYFNFS 142

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           +K  +K + L        G K   + I G N+Y  LK E G HR+ RI   +S+ + HTS
Sbjct: 143 QKNNWKIKILSFIKSNNNGYKEIIIQIYGLNSYSLLKNESGNHRVQRIPITESHDKVHTS 202

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
             +I V   + ++ +I I+  D +I T++ASGAGGQHVN TDSAVRI HIPT + V+CQ 
Sbjct: 203 TCTIAVINKIKNNKKILINNKDLKIHTFKASGAGGQHVNKTDSAVRIFHIPTKITVECQS 262

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQM 322
            RSQH NK  A  +L+ K+  L++ K        +  K+ IG G    +IR+Y   P   
Sbjct: 263 NRSQHINKKNALKILKYKI--LKINKNSIKNKEDKFRKSLIGTGKRSEKIRTYNF-PQNR 319

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDF 346
           V + + N+   + + +L+G+L+  
Sbjct: 320 VTNHKINLTVYNLNSILNGNLEKI 343


>gi|241998776|ref|XP_002434031.1| protein releasing factor, putative [Ixodes scapularis]
 gi|215495790|gb|EEC05431.1| protein releasing factor, putative [Ixodes scapularis]
          Length = 356

 Score =  169 bits (428), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 98/341 (28%), Positives = 163/341 (47%), Gaps = 18/341 (5%)

Query: 23  LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDC 82
           L  +  + E      +    + L  +   L + ++ +K+I +   +   L +L  +    
Sbjct: 6   LKQVEEELEKCS--HDSQRTRELTAKMSRLSSIVALVKKINELNREMEGLKDLERDFTRT 63

Query: 83  SILQETSDNLQRIKLEVEYKQFESL-------LSGEADSNDAYLEVHAGAGGTESQDWAN 135
                 S  +   K      +  +             D+ +  LEV AG GG E+  +  
Sbjct: 64  GDKDMVSMAVDDQKNCQAELKQLNDQILDQIVPPDPIDTTEVLLEVTAGVGGQEAMLFTK 123

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            +L MY R+A  + +    ++    +  G++ A+L + G +A   LK E GVHR+ R+  
Sbjct: 124 DVLDMYVRYASWKGWSCRIVDYETSDMGGVRHASLNVGGRDAGKCLKFESGVHRVQRVPQ 183

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +   R HTS  ++ V P +   +++ ++  D  + T RASG GGQHVNTT+SAV+I HI
Sbjct: 184 TERAGRIHTSTMAVAVLP-LPAEVDVVLNSKDLVMKTKRASGPGGQHVNTTESAVQIQHI 242

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWGRQI 312
           P+G++V+  QERSQ +NK  A   LRAKLYE+EL K+   ++     K ++   G   +I
Sbjct: 243 PSGIMVESSQERSQLQNKELALKKLRAKLYEIELNKK--TSSHVTQRKLQVGTRGRSEKI 300

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351
           R+Y       V D R  +   +  D L G  +LD  ++  L
Sbjct: 301 RTYNFA-QDRVTDHRIPVTVHNVEDFLHGQDNLDSVIRRLL 340


>gi|167041273|gb|ABZ06029.1| putative peptidyl-tRNA hydrolase domain protein [uncultured marine
           microorganism HF4000_005D21]
 gi|167045778|gb|ABZ10424.1| putative peptidyl-tRNA hydrolase domain protein [uncultured marine
           bacterium HF4000_APKG3108]
          Length = 358

 Score =  169 bits (427), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 108/335 (32%), Positives = 169/335 (50%), Gaps = 14/335 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72
               V     L  +     +  N  +     +    +   I+  +     +    +   +
Sbjct: 7   VKQIVSTYETLEKELASGDI--NKKDFANKSKGYSSIREVINQARSYLGFEKEKVELEKI 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGTES 130
           +E    + D   L +        K E   K  +     + EADS +A LE+ AG GG E+
Sbjct: 65  IEDKKSDKDMIELAKNELIQLSKKKEENEKILKVYLLPNDEADSKNAILEIRAGTGGLEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +   L +MY R    +K+  E + +   E  G K   LLIKG N Y +LK E GVHR+
Sbjct: 125 TLFVADLYKMYERVCLNKKWSFEIINLSKSEAGGFKEVILLIKGTNIYSFLKFESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + ++++I+E D RID +R+SG GGQ VNTTDSAV
Sbjct: 185 QRVPETETQGRVHTSAATVAVLP-EAEEVDVKINEKDLRIDVFRSSGPGGQSVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+ V  Q E+SQHKN+A+A  +LR+++Y+ E +K+++  +       +IG G 
Sbjct: 244 RITHLPTGIAVSQQDEKSQHKNRAKAMKILRSRVYDAEREKKDKKRSKDRK--NQIGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
              +IR+Y   P   V D R N+      + L+GD
Sbjct: 302 RSERIRTYNF-PQSRVTDHRINLTIHKLQEFLNGD 335


>gi|297182635|gb|ADI18793.1| protein chain release factor a [uncultured SAR11 cluster bacterium
           HF4000_37C10]
          Length = 358

 Score =  169 bits (427), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 110/335 (32%), Positives = 168/335 (50%), Gaps = 14/335 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI---QDRLCDNLIL 72
               V     L  +     +  N  +     +    +   I+  +     +    +   +
Sbjct: 7   VQQIVSTYETLEKELASGDI--NKKDFANKSKGYSSIREVINQARSYLSFKKEQAELEKI 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGEADSNDAYLEVHAGAGGTES 130
           +E    + D   L +        K E   K  +       EADS +A LE+ AG GG E+
Sbjct: 65  IEDKKSDKDIIELAKNELIQLSKKREENEKILKVYLLPKDEADSKNAILEIRAGTGGLEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +   L +MY R    +K+  E + +   E  G K   LLIKG N Y +LK E GVHR+
Sbjct: 125 TLFVADLYKMYERVCLNKKWSFEIINLSKSEAGGFKEVILLIKGTNIYSFLKFESGVHRV 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   ++  R HTS +++ V P   + I++ I+E D RID +R+SG GGQ VNTTDSAV
Sbjct: 185 QRVPETETQGRVHTSAATVAVLP-EAEEIDVNINEKDLRIDVFRSSGPGGQSVNTTDSAV 243

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITH+PTG+VV  Q E+SQHKN+A+A  +LR+++Y+ E +K+++  +       +IG G 
Sbjct: 244 RITHLPTGIVVSQQDEKSQHKNRAKAMKILRSRVYDAEREKKDKKRSKDRK--NQIGSGD 301

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
              +IR+Y   P   V D R N+      + L+GD
Sbjct: 302 RSERIRTYNF-PQSRVTDHRINLTIHKLQEFLNGD 335


>gi|262341278|ref|YP_003284133.1| peptide chain release factor 1 [Blattabacterium sp. (Blattella
           germanica) str. Bge]
 gi|262272615|gb|ACY40523.1| peptide chain release factor 1 [Blattabacterium sp. (Blattella
           germanica) str. Bge]
          Length = 361

 Score =  169 bits (427), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 101/347 (29%), Positives = 178/347 (51%), Gaps = 18/347 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            + + +    ++     P++  +  + K+L+++   L+  +S  ++   +L        +
Sbjct: 10  LEGSKKEFYEISKSIIQPNIISDQKKYKILLKKYLKLEKIVSLYEKYNKKLALLQEADFI 69

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLL----------SGEADSNDAYLEVHAGA 125
              + D  + +  S    +I   +   + ES                +  +A +E+ +G 
Sbjct: 70  LKNDSDADLKELASIEKYKILENLSSIEKESYDLIFSLSNETEETTENHRNAIVELRSGT 129

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK-GPNAYGWLKGE 184
           GG E+  +   +LRMYT + +K  +K + +    G   G K   L +      YG LK E
Sbjct: 130 GGDEACLFVEDILRMYTMYFKKSGWKYKIIHAQKGGIKGYKEIILDVNGKEGVYGNLKFE 189

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ RI   +S  R HTS  ++ V P V D IE+ I+ SD + +T+R+SGAGGQHVN
Sbjct: 190 SGVHRVQRIPKTESQGRVHTSAITVAVLPQVKD-IEVNINLSDIKKETFRSSGAGGQHVN 248

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T+SAVR+TH+P+ + V+CQ+ERSQHKN  +A N+LR+++Y+ E +KR +  +I    K+
Sbjct: 249 KTESAVRLTHLPSKITVECQEERSQHKNFEKAINVLRSRIYQNEKEKRLKEISI--KRKS 306

Query: 305 EIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            +  G +   IR+Y   P   V D R +      +  ++G++ + + 
Sbjct: 307 LVSTGDRSVKIRTYNY-PKSRVTDHRIHKSIYDLAGFMNGNIQEMIN 352


>gi|28950278|emb|CAD71246.1| related to translation releasing factor RF-1, mitochondrial
           [Neurospora crassa]
          Length = 430

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 93/364 (25%), Positives = 156/364 (42%), Gaps = 36/364 (9%)

Query: 18  NAVQRLSFLNTKTE---DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
                   L  + E   +P        A  + +    L        + +  L +   LLE
Sbjct: 43  KLAAEHKQLTKQLESEYEPTAA---KRAGEISKVVAALQEL----DKAKAALDELNGLLE 95

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
               E       +     + ++                      +E+H G GGTE + +A
Sbjct: 96  SDDAELRQLANDDLDATKKHLETLGLNLSATLTPKHPFADMPCLIELHPGPGGTEGRHFA 155

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGE--------EAGIKSATLLIKGPNAYGWLKGEQG 186
           + L RMY R+ E + +    +   + E        E  I  A L +  P A+   +GE G
Sbjct: 156 DTLFRMYQRYCENKGYSARVISYQEAEDRTPGLDGEVPISEAILEVTDPGAFAAFRGEAG 215

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYP------------VVDDSIEIEISESDCRIDTYR 234
           +HR+ RI   +   R HTS  ++WV P              +   +  +  ++ + +  R
Sbjct: 216 MHRVQRIPATEKQGRTHTSAVAVWVLPSFPENSTDAENDFNNPESDFYVDPTEVKSEKMR 275

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASGAGGQHVN T+SA+R+THIPTG+ V  Q  RSQ +N+ +AW +LR+++  L  ++RE 
Sbjct: 276 ASGAGGQHVNKTESAIRLTHIPTGIQVSMQDSRSQQQNRERAWRLLRSRIASLRREQREA 335

Query: 295 IANIGES---SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKA 349
            A        S++++  G +IR+Y  Q      D R+ ++  +  +VL G   LD  + +
Sbjct: 336 QAKDLRDSVLSQSQMSRGDKIRTYNYQ-QDRCTDHRSGLDVHNLPNVLQGGEVLDKVINS 394

Query: 350 TLAI 353
             + 
Sbjct: 395 VQSW 398


>gi|150865313|ref|XP_001384475.2| hypothetical protein PICST_58482 [Scheffersomyces stipitis CBS
           6054]
 gi|149386569|gb|ABN66446.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 376

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 100/346 (28%), Positives = 156/346 (45%), Gaps = 21/346 (6%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +   Q    +  K        +    + L  +  +L   +   ++    L     L  + 
Sbjct: 14  EVMKQEFDLVEEKMSSGDF--D----QELSIKFSNLSVILENYEKYTSDLSTFEELKSII 67

Query: 77  LEEDDCSIL-----QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
           +E +           E +  +  ++  +   Q   L   +     A LE+  G GG+E+ 
Sbjct: 68  VEPNQDPEFLEEAISEANVTIPHLEKSISTLQSRLLPPMKFSDKPAILEMRPGVGGSEAS 127

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L++MY  +A   ++K   +   +G    +    + I  P +Y  L+ E GVHR+ 
Sbjct: 128 LFAGDLMQMYINFANHMRWKYTIVSKSEGNGGFVNEVIMSIDTPGSYNVLRHESGVHRVQ 187

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRIDTYRASGAGGQHVN 244
           RI   +S  R HTS ++I V P + D         E + +  + RIDT RA G GGQHVN
Sbjct: 188 RIPSTESKGRIHTSTAAIVVLPKMSDGNESSLKEDERQFAPGEVRIDTMRAGGKGGQHVN 247

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK- 303
           TTDSAVR+ HIPTGV V  Q ERSQ KNKA+A+++LRA+L  LE  K         + + 
Sbjct: 248 TTDSAVRLVHIPTGVTVMQQDERSQPKNKAKAFSILRARLAALERDKEFAEQRKMRTDQV 307

Query: 304 TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMK 348
           T      +IR+Y   P   V D R        +  + G+ L D ++
Sbjct: 308 TTTDRSDKIRTYNY-PQNRVTDHRCGFSLHDLTGCMAGNRLMDIIE 352


>gi|164424709|ref|XP_960901.2| hypothetical protein NCU06721 [Neurospora crassa OR74A]
 gi|157070629|gb|EAA31665.2| hypothetical protein NCU06721 [Neurospora crassa OR74A]
          Length = 415

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 93/364 (25%), Positives = 156/364 (42%), Gaps = 36/364 (9%)

Query: 18  NAVQRLSFLNTKTE---DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
                   L  + E   +P        A  + +    L        + +  L +   LLE
Sbjct: 28  KLAAEHKQLTKQLESEYEPTAA---KRAGEISKVVAALQEL----DKAKAALDELNGLLE 80

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
               E       +     + ++                      +E+H G GGTE + +A
Sbjct: 81  SDDAELRQLANDDLDATKKHLETLGLNLSATLTPKHPFADMPCLIELHPGPGGTEGRHFA 140

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGE--------EAGIKSATLLIKGPNAYGWLKGEQG 186
           + L RMY R+ E + +    +   + E        E  I  A L +  P A+   +GE G
Sbjct: 141 DTLFRMYQRYCENKGYSARVISYQEAEDRTPGLDGEVPISEAILEVTDPGAFAAFRGEAG 200

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYP------------VVDDSIEIEISESDCRIDTYR 234
           +HR+ RI   +   R HTS  ++WV P              +   +  +  ++ + +  R
Sbjct: 201 MHRVQRIPATEKQGRTHTSAVAVWVLPSFPENSTDAENDFNNPESDFYVDPTEVKSEKMR 260

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASGAGGQHVN T+SA+R+THIPTG+ V  Q  RSQ +N+ +AW +LR+++  L  ++RE 
Sbjct: 261 ASGAGGQHVNKTESAIRLTHIPTGIQVSMQDSRSQQQNRERAWRLLRSRIASLRREQREA 320

Query: 295 IANIGES---SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKA 349
            A        S++++  G +IR+Y  Q      D R+ ++  +  +VL G   LD  + +
Sbjct: 321 QAKDLRDSVLSQSQMSRGDKIRTYNYQ-QDRCTDHRSGLDVHNLPNVLQGGEVLDKVINS 379

Query: 350 TLAI 353
             + 
Sbjct: 380 VQSW 383


>gi|289615662|emb|CBI57583.1| unnamed protein product [Sordaria macrospora]
          Length = 436

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 90/364 (24%), Positives = 155/364 (42%), Gaps = 36/364 (9%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
                   L  + E      +   A    +    +   ++ ++E+         L  L  
Sbjct: 49  KLAAEHQQLTKQLE-----SDYEPAAA--KRAGEISKVVAALQELDKAKAALDELHGLLK 101

Query: 78  EED---DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
            +D         +     + ++                      +E+H G GGTE + +A
Sbjct: 102 SDDAELRQLANDDLDATKKHLETLGTNLSATLTPKHPFADMPCLIELHPGPGGTEGRHFA 161

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGE--------EAGIKSATLLIKGPNAYGWLKGEQG 186
           + L RMY ++ E + +    L   + E        E  I  A L +  P A+   +GE G
Sbjct: 162 DTLFRMYQKYCENKGYTARVLSYQEAEDRTPGLDGEVPISEAVLEVTDPGAFAAFRGEAG 221

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYP------------VVDDSIEIEISESDCRIDTYR 234
           +HR+ RI   +   R HTS  ++WV P              +   +  I  ++ + +  R
Sbjct: 222 MHRVQRIPATEKQGRTHTSAVAVWVLPSFPENSTDAENDFNNPESDFYIDPTEVKSEKMR 281

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASGAGGQHVN T+SA+R+THIPTG+ V  Q  RSQ +N+ +AW +LR+++  L  ++R+ 
Sbjct: 282 ASGAGGQHVNKTESAIRLTHIPTGIQVSMQDSRSQSQNREKAWRLLRSRIASLRREQRDA 341

Query: 295 IANIGES---SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKA 349
            A        S+ ++  G +IR+Y  Q      D R+ ++  +  +VL G   LD  + +
Sbjct: 342 QAKDLRDSVLSQAQMSRGDKIRTYNYQ-QDRCTDHRSGLDVHNLPNVLQGGEILDKVINS 400

Query: 350 TLAI 353
             + 
Sbjct: 401 VQSW 404


>gi|73946154|ref|XP_541157.2| PREDICTED: similar to mitochondrial translational release factor
           1-like [Canis familiaris]
          Length = 280

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 101/257 (39%), Positives = 140/257 (54%), Gaps = 9/257 (3%)

Query: 99  VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
                   + S E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE  
Sbjct: 11  YLQIILLLVPSEETDKNDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYF 70

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
             E  G++ A+  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P     
Sbjct: 71  PSEIGGLRHASASIGGLEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILP-QPTE 129

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           I + I+  D RI T RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+  A  
Sbjct: 130 INLVINPKDLRIHTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMK 189

Query: 279 MLRAKLYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
            LRAKLY + L+  EE +    + K ++   G   +IR+Y   P   V D R N      
Sbjct: 190 KLRAKLYSMYLE--EETSKRYSARKIQVGTKGRSEKIRTYNF-PQNRVTDHRINKSLHDL 246

Query: 336 SDVLDGD--LDDFMKAT 350
              + G+  LD+ +++ 
Sbjct: 247 ETFMQGEYLLDELVQSL 263


>gi|294659861|ref|XP_002770657.1| DEHA2G17204p [Debaryomyces hansenii CBS767]
 gi|199434289|emb|CAR65990.1| DEHA2G17204p [Debaryomyces hansenii]
          Length = 411

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 107/345 (31%), Positives = 164/345 (47%), Gaps = 20/345 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           ++       L TK  +     +    +    +  ++   +    + Q  + +   LLE+ 
Sbjct: 54  ESMKDEFKILETKISEGSF--D----QETNVKFSNISVILDNYHKYQHEIENLQSLLEIL 107

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYK----QFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            EE+D  ++ E S+ L+ +  +V       Q   L         A LE+  G GG+E+  
Sbjct: 108 HEEEDAEMVHEASNELKEVIPKVFNFTKVLQSRLLPPVTHSDRPAMLELRPGVGGSEAAL 167

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  LL MY  +A   K+K   +    G    +  A + I  P AY  L+ E GVHR+ R
Sbjct: 168 FAGDLLNMYINFANHMKWKWTMISESHGNNGSVNEAIISIDNPGAYSILRHESGVHRVQR 227

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRIDTYRASGAGGQHVNT 245
           I   ++  R HTS +++ V P + +         E +    + RIDT RA G GGQHVNT
Sbjct: 228 IPSTETKGRIHTSTAAVVVLPKMSEGTESSLKDDERQFQPGEVRIDTMRAGGKGGQHVNT 287

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-T 304
           TDSAVR+THIPTG+ VQ Q ERSQ KNKA+A+++LRA+L  LE  K         + + T
Sbjct: 288 TDSAVRLTHIPTGIQVQQQDERSQPKNKAKAFSILRARLAALERDKEIAEQRKLRTDQVT 347

Query: 305 EIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMK 348
                 +IR+Y   P   V D R           ++G  L++ ++
Sbjct: 348 TTDRSDKIRTYNY-PQNRVTDHRCGFSLYDIDGCMEGYRLNEIVE 391


>gi|167842465|gb|ACA03160.1| RF2 [Dictyostelium fasciculatum]
 gi|328868131|gb|EGG16511.1| class I peptide chain release factor [Dictyostelium fasciculatum]
          Length = 425

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 135/364 (37%), Positives = 206/364 (56%), Gaps = 16/364 (4%)

Query: 2   KLSRQLNCL--GGLFDWDNAVQRLSFLNTKTEDPHLWQ----NVIEAKMLMRERQHLDNA 55
           ++ R +  L  G +  +     RL  L     D  L      +  +   L++E  H+   
Sbjct: 63  EIRRVIELLLNGTM--YKKMKIRLKEL-QPIHDRSLVDITTIDQNDTGSLLKEYNHIRVQ 119

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           +  I ++  +  D L L+++A    D  ++QE     +++  +    +F+SL+S + D++
Sbjct: 120 VDQIDQLPVQFKDYLELVKMAKTAGDREMMQEAQSTTEQLMSQCNELEFKSLMSNDMDND 179

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
            AY+E+HAGAGGT+S DW  ML  MY +WA +R F  + ++   G+  G K   L I GP
Sbjct: 180 SAYMEIHAGAGGTDSMDWTQMLSSMYIKWASRRGFDAQIIDESHGDICGYKKVILKISGP 239

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS--ESDCRIDTY 233
            AYGW + E GVH+L+R+SP+++N +RHTSF+S++VYP  D   ++ +     D  I+T 
Sbjct: 240 YAYGWTRTENGVHKLIRMSPFNTNGKRHTSFASVFVYPSSDADEKVAVDLVSRDLVIETM 299

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R+SGAGGQH N T+SAVRITH P+G+ V   QERSQHKNK  A ++L++KL  LEL+KR+
Sbjct: 300 RSSGAGGQHTNKTESAVRITHTPSGLSVNISQERSQHKNKQIAMDLLKSKLLSLELRKRD 359

Query: 294 EIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMK 348
           E      S +  I   G G   R Y   P   +KD RT  E ++  + L G  +LD  +K
Sbjct: 360 EQEKNLRSEQMGINGFGSGSINRVYTQHPQTRIKDQRTGQESSNFEEFLQGGEELDQMIK 419

Query: 349 ATLA 352
             L+
Sbjct: 420 EVLS 423


>gi|190348057|gb|EDK40443.2| hypothetical protein PGUG_04541 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 421

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 100/341 (29%), Positives = 153/341 (44%), Gaps = 20/341 (5%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +  S L       +   +    +       +L   +         + +   L E+  EE 
Sbjct: 69  KEYSVLEEAITKGNF--D----QETNVRYSNLSVILDNYHRYVQDMENVAALKEMIAEET 122

Query: 81  DCSILQETSDNLQR----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           D  + QE    LQ     ++  V+  Q   L           LE+  G GG+E+  +   
Sbjct: 123 DPEMQQEAIKELQHLVPNVQRSVKVLQARLLPPVSHSDKATILELRPGVGGSEAALFCGD 182

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L+ MY  +A  +K+K   +         +    + I  P +Y  L+ E GVHR+ RI   
Sbjct: 183 LVNMYINFANNKKWKWTKISEGLTNSGSLNEVIMSIDVPGSYNLLRHESGVHRVQRIPAT 242

Query: 197 DSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           ++  R HTS +++ V P + +         E + +  + RIDT RA G GGQHVNTTDSA
Sbjct: 243 ETKGRIHTSTAAVVVLPKISEGTESSLKDDERQFAPGEVRIDTMRAGGKGGQHVNTTDSA 302

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGW 308
           VR+THIPTG+ VQ Q ERSQ KNKA+A+++LRA+L  LE  K         + + T    
Sbjct: 303 VRLTHIPTGIQVQQQDERSQPKNKAKAFSILRARLAALERDKEIAEQRKLRTDQVTTTDR 362

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMK 348
             +IR+Y   P   V D R           + G  L++ ++
Sbjct: 363 SDKIRTYNF-PQNRVTDHRCGFSLHDIDGCMQGYKLEEIIE 402


>gi|307128661|ref|YP_003880691.1| peptide chain release factor RF2 [Candidatus Sulcia muelleri CARI]
 gi|306483123|gb|ADM89993.1| peptide chain release factor RF2 [Candidatus Sulcia muelleri CARI]
          Length = 337

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 110/285 (38%), Positives = 180/285 (63%), Gaps = 7/285 (2%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           I+  L D  I L                + L +IK  +   + + + + +    +A +++
Sbjct: 45  IKKLLYDIKIFLYEIKSLKKRE----LINKLNKIKNFINQIESQIIFTKKEYKLNAIIQI 100

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
             GAGGTES DW +ML RMYT WAEK  +  + L    G+  G+K     ++G + +G+L
Sbjct: 101 TPGAGGTESCDWVSMLYRMYTMWAEKNNYSIKELYNLQGDVGGLKYILFEVQGFSPFGFL 160

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           KGE GVHRLVRISP+D++ R HTSF+S+++YP+++D I+I+I+ SD +  T+R+ G+GGQ
Sbjct: 161 KGENGVHRLVRISPFDNSKR-HTSFASVYIYPLINDDIKIKINNSDIKWSTFRSGGSGGQ 219

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           +VN  ++ VR+ H PT ++++  + RSQ KNK +A  +L+++LY +E Q +  I    + 
Sbjct: 220 NVNKVETGVRLHHKPTNIIIENTETRSQIKNKTKALKLLKSRLYYIEKQNKNIIRKKNKL 279

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            K  I WG QIR+Y++ PY++VKDL+T  E ++ + V+DG+L++F
Sbjct: 280 KK--IEWGSQIRNYIMHPYKLVKDLKTGYETSNINSVMDGNLNNF 322


>gi|308233416|ref|ZP_07664153.1| peptide chain release factor 1 [Atopobium vaginae DSM 15829]
          Length = 300

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 103/283 (36%), Positives = 152/283 (53%), Gaps = 10/283 (3%)

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           D +     +L  A  ++   + ++ + N +++    +  +   +     D  D  +E+ A
Sbjct: 2   DDIEAAKEMLHDADADEREMLQEDIAANEEKLPALEDEIKIMLIPGDPNDEKDTIVEIRA 61

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G GG E+  +A  L +MY R+AE + +K E L     E  G K+    + G   Y  +K 
Sbjct: 62  GVGGDEAAIFAGDLYKMYERFAESKNWKVEILSSSPSEVGGFKTIEFKMLGEKVYSVMKY 121

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHR+ R+   +S  R  TS +++ V P   D I+I+I  +D RIDTY ASG GGQ V
Sbjct: 122 ESGVHRVQRVPKTESQGRIQTSTATVAVLP-EADEIDIQIDPTDLRIDTYCASGPGGQCV 180

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NTT SAVRITH+PT  VVQ Q +RSQ +N+     MLRA+LYE+EL+K++E    G +  
Sbjct: 181 NTTYSAVRITHLPTNTVVQSQDQRSQIQNREVCMQMLRARLYEMELEKQQEEQ--GAARL 238

Query: 304 TEIG---WGRQIRSYVLQPYQMVKDLRTNIE-KTSPSDVLDGD 342
           ++IG      +IR+Y  QP   V D R       +   VL GD
Sbjct: 239 SQIGHGNRSEKIRTYN-QPQDRVTDHRIGFNATYN--GVLLGD 278


>gi|148988472|ref|ZP_01819919.1| peptide chain release factor 1 [Streptococcus pneumoniae SP6-BS73]
 gi|147926153|gb|EDK77227.1| peptide chain release factor 1 [Streptococcus pneumoniae SP6-BS73]
          Length = 294

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 84/255 (32%), Positives = 133/255 (52%), Gaps = 7/255 (2%)

Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
              L     D  +  LE+   AGG E+  +A  LL MY ++AE + ++ E +E       
Sbjct: 35  ILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAEAQGWRFEVMEASMNGVG 94

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G K    ++ G + Y  LK E G HR+ R+   +S  R HTS +++ V P   + +E +I
Sbjct: 95  GFKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMP-EVEEVEYDI 153

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
              D R+D Y ASGAGGQ+VN   +AVRI H+PT + V+ Q+ER+Q KN+ +A  ++RA+
Sbjct: 154 DPKDLRVDIYHASGAGGQNVNKVATAVRIVHLPTNIKVEMQEERTQQKNREKAMKIIRAR 213

Query: 284 LYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           + +   Q  ++  +     K+ IG G    +IR+Y   P   V D R  +       +L 
Sbjct: 214 VADHFAQIAQDEQD--AERKSTIGTGDRSERIRTYNF-PQNRVTDHRIGLTLQKLDTILS 270

Query: 341 GDLDDFMKATLAIKK 355
           G LD+ + A +   +
Sbjct: 271 GKLDEVVDALVLYDQ 285


>gi|254577375|ref|XP_002494674.1| ZYRO0A07040p [Zygosaccharomyces rouxii]
 gi|238937563|emb|CAR25741.1| ZYRO0A07040p [Zygosaccharomyces rouxii]
          Length = 393

 Score =  166 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 102/345 (29%), Positives = 158/345 (45%), Gaps = 21/345 (6%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           Q +  L+        +          +    + +  S  +E Q+ L +   L E+   + 
Sbjct: 45  QEIVQLDQALSKGDGFD-----AETQKTYSRVSSIRSMYEEYQELLDNLKGLQEMIQTDP 99

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTESQDWANMLL 138
                 ++  +    +           L            LE+  G GGTE+  +   LL
Sbjct: 100 SLKDDAKSEFDNSLPQFRQVSNNLLRKLLPPHPFAEKACILELRPGVGGTEAMIFTQDLL 159

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            MY  +A+   +K   +  ++ +   G+  A L I  P AY  LK E GVHR+ RI   +
Sbjct: 160 NMYIGYAQYHHWKYHVIAQNENQSGNGLVDAILSIDEPGAYDKLKYESGVHRVQRIPATE 219

Query: 198 SNSRRHTSFSSIWVYPVVDDSI------EIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           +  R HTS +++ V P + +S+      E      + RID  RA G GGQHVNTTDSAVR
Sbjct: 220 TKGRTHTSTAAVIVLPQIVESVKDAEQSERSFRPDEIRIDVMRAGGKGGQHVNTTDSAVR 279

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GW 308
           ITH P+G+VV  Q ERSQHKNKA+A+ +LRA+L   E +++E+  +   + K ++     
Sbjct: 280 ITHFPSGIVVAMQDERSQHKNKAKAFAVLRARLA--ERERKEKENSERAARKDQVTTTDR 337

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLA 352
             +IR+Y   P   + D R N        V  G  LD+ + +  A
Sbjct: 338 SDKIRTYNY-PQNRITDHRCNFTLYDIEGVTSGVKLDEVIDSMAA 381


>gi|146415684|ref|XP_001483812.1| hypothetical protein PGUG_04541 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 421

 Score =  166 bits (420), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 100/341 (29%), Positives = 153/341 (44%), Gaps = 20/341 (5%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +  S L       +   +    +       +L   +         + +   L E+  EE 
Sbjct: 69  KEYSVLEEAITKGNF--D----QETNVRYSNLSVILDNYHRYVQDMENVAALKEMIAEET 122

Query: 81  DCSILQETSDNLQR----IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
           D  + QE    LQ     ++  V+  Q   L           LE+  G GG+E+  +   
Sbjct: 123 DPEMQQEAIKELQHLVPNVQRSVKVLQARLLPPVSHSDKATILELRPGVGGSEAALFCGD 182

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           L+ MY  +A  +K+K   +         +    + I  P +Y  L+ E GVHR+ RI   
Sbjct: 183 LVNMYINFANNKKWKWTKILEGLTNSGSLNEVIMSIDVPGSYNLLRHESGVHRVQRIPAT 242

Query: 197 DSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           ++  R HTS +++ V P + +         E + +  + RIDT RA G GGQHVNTTDSA
Sbjct: 243 ETKGRIHTSTAAVVVLPKISEGTESSLKDDERQFAPGEVRIDTMRAGGKGGQHVNTTDSA 302

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGW 308
           VR+THIPTG+ VQ Q ERSQ KNKA+A+++LRA+L  LE  K         + + T    
Sbjct: 303 VRLTHIPTGIQVQQQDERSQPKNKAKAFSILRARLAALERDKEIAEQRKLRTDQVTTTDR 362

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMK 348
             +IR+Y   P   V D R           + G  L++ ++
Sbjct: 363 SDKIRTYNF-PQNRVTDHRCGFSLHDIDGCMQGYKLEEIIE 402


>gi|149409336|ref|XP_001510216.1| PREDICTED: similar to low density lipoprotein receptor-related
           protein 10 [Ornithorhynchus anatinus]
          Length = 380

 Score =  166 bits (420), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 108/286 (37%), Positives = 147/286 (51%), Gaps = 9/286 (3%)

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
            +L+    EE       E     + I        F  + S EAD ND  LE+ AG GG E
Sbjct: 82  ELLMHDEDEELRKLAESEIITCQKEIAELNRQIVFLLIPSEEADENDLILELTAGIGGQE 141

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +   +  MY ++A  +K+  E LE    E  G++ AT  I G  AY  LK E GVHR
Sbjct: 142 AMLFTAEMFDMYEQYAAYKKWHFETLEYFPSEIGGLRHATASIGGHEAYKHLKFEGGVHR 201

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +   R HTS  ++ V P     I + I   D RI+T RASGAGGQHVNTTDSA
Sbjct: 202 VQRVPKTERQGRTHTSTMTVAVLP-QPTEINLVIHPKDLRIETKRASGAGGQHVNTTDSA 260

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI--- 306
           VRI H+PTG+  +CQQERSQ KN+  A   LRAKLY ++L+  EE +    + K +I   
Sbjct: 261 VRIVHVPTGIASECQQERSQLKNREMAMKKLRAKLYSIQLE--EETSKRYSARKIQIGTK 318

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKAT 350
           G   +IR+Y       V D R +         + G+  LD+ + + 
Sbjct: 319 GRSEKIRTYNFS-QDRVTDHRISKSFHDIESFMLGERLLDELIHSL 363


>gi|328870409|gb|EGG18783.1| peptide chain release factor 1 [Dictyostelium fasciculatum]
          Length = 530

 Score =  166 bits (420), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 114/341 (33%), Positives = 177/341 (51%), Gaps = 13/341 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
             +   L    E   L     E K + +E   L   ++  K +  +  +   L E+  E 
Sbjct: 179 ETKFDGLQRLIESQSL--PQSEIKKVSKELDELREQVNSWKVLLVKCQELRELEEMVSEV 236

Query: 80  DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
            D    +  + +L+ +  +V+  +       L S + D  +A +E+ AG GG+E+Q +A 
Sbjct: 237 KDKEEKELMNQDLKEMVEQVKDSERALVMSLLPSDKDDEGNAIMEIRAGTGGSEAQLFAL 296

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAG---IKSATLLIKGPNAYGWLKGEQGVHRLVR 192
            +L MY  +A+   +K E LEI   +  G    + A+  I G   +G+LK E GVHR+ R
Sbjct: 297 EMLGMYEGYAQTMGWKFEVLEIGWTDAVGNKACRDASASISGRGVFGFLKNESGVHRVQR 356

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           I   ++  R HTS  ++ + P     ++I+I +S+ RID YR+SG GGQ VNTTDSAVRI
Sbjct: 357 IPETETMGRVHTSTVTVAILP-EPKEVDIKIRDSELRIDVYRSSGNGGQSVNTTDSAVRI 415

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQ 311
           TH+PTG VV  Q ERSQ  N+A+A  +LRA+LYE E  +     +   SS+  +     +
Sbjct: 416 THLPTGTVVAMQDERSQLMNRAKAMKILRARLYEAERSRLHNERSSHRSSQIGDASRSEK 475

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
           IR+Y   P   V D R NI   +   V+ G+ L+D ++  +
Sbjct: 476 IRTYNF-PQDRVTDHRVNISTNNIESVMAGESLNDLIEEII 515


>gi|224035189|gb|ACN36670.1| unknown [Zea mays]
          Length = 301

 Score =  166 bits (420), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 112/299 (37%), Positives = 169/299 (56%), Gaps = 13/299 (4%)

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           + ++  + ++    ++    ++  ++    +   + +L         L   EAD  D  L
Sbjct: 2   EGLKSLVANDHEEKDMREMAEEELLVAVEEEKRLQHELFRS-----LLPKDEADEKDCIL 56

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           EV AG GG E+  +A  + RMY ++A+K  +K + ++I +    G K A+  I GP A+G
Sbjct: 57  EVRAGTGGEEASLFAMDIFRMYEKYAQKNGWKFDVIDIMESAVKGYKEASGTISGPGAFG 116

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
            LK E G+HR+ R+   + + R HTS  S+ V P   D +++++   D RIDTYR+ G+G
Sbjct: 117 KLKFESGIHRVQRVPATEKSGRMHTSAVSVAVLPQ-ADEVDVQLRNEDLRIDTYRSGGSG 175

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVRITHIPTG VV  Q ERSQH NKA+A  +LRA+LYELE ++     +  
Sbjct: 176 GQSVNTTDSAVRITHIPTGTVVAIQDERSQHMNKAKALKVLRARLYELERRRLHMDRSKL 235

Query: 300 ESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354
            S   +IG G    +IR+Y   P   V D R  +   S +DV++G+ LD F+ A L  +
Sbjct: 236 RSE--QIGSGDRSERIRTYNF-PQGRVTDHRVGVTHHSIADVMEGESLDMFVDALLLQE 291


>gi|40062727|gb|AAR37632.1| peptide chain release factor 1, degenerate [uncultured marine
           bacterium 438]
          Length = 358

 Score =  165 bits (418), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 170/344 (49%), Gaps = 14/344 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLIL 72
            ++ + + S L  +     +  +        +E   L+  I         +    D   +
Sbjct: 7   IEDLISKHSILEKELSSGEV--DKKLFAEKSKEYSDLNEVIDDARKYFSYEGEKKDLEKI 64

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS--GEADSNDAYLEVHAGAGGTES 130
           L  +  +++   + E      +++ E   K+ +  L    EAD  +A +E+ AG GG E+
Sbjct: 65  LSDSSSDNEFKEMAEVELKDLKLENETIEKKLKLFLLPKDEADKKNAIIEIRAGTGGLEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  L +MY + + ++K++ E + +   E  G+K     I+G N Y  LK E G    
Sbjct: 125 SLFAADLFKMYEKVSHQKKWELELISMSQSEAGGLKEVIASIRGKNIYSTLKYESGSSSC 184

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            + S Y ++    T     W      + ++I+I++SD RID +RA G GGQ VNTTDSAV
Sbjct: 185 SKSSRYRNSREEFTLLQQQWAVLPEAEEVDIKINDSDLRIDVFRAGGPGGQSVNTTDSAV 244

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG- 309
           RITHIPTG+ V  Q ++SQHKNKA+   +LR++LYELE  + E      E  K++IG G 
Sbjct: 245 RITHIPTGLSVSQQDQKSQHKNKAKGMLILRSRLYELERSRIEGER--SEDRKSKIGTGD 302

Query: 310 --RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
              +IR+Y   P   V D R N+        L+G+  D+ +++ 
Sbjct: 303 RSERIRTYNF-PQGRVTDHRINLTLHKLEAFLEGEAFDEMVESL 345


>gi|3522941|gb|AAC34223.1| putative peptide chain release factor [Arabidopsis thaliana]
          Length = 395

 Score =  165 bits (418), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 115/379 (30%), Positives = 181/379 (47%), Gaps = 42/379 (11%)

Query: 9   CLGGLFD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
            L  + D        R + L      P    +  E     +E + L +++  I +++ + 
Sbjct: 8   DLIKIMDQRLSAIEHRNAVLQKLINQPEY--SPEEFSRANKELRKLRDSMLLINDLRAKQ 65

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRI------------------------------K 96
               +L  +       S+++ T    +                                K
Sbjct: 66  KVVNLLYRIIYLFQRSSLIRFTFCWQEIDGLKSLVSESSDDKDMLDLAVGELDEAVEEEK 125

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
                     L   EAD  D  LEV AG GG E+  +A  + RMY R+++K+ +K + ++
Sbjct: 126 RLQTLLLKSLLPKDEADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKGWKFDIVD 185

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
           I + +  G K A+  I G + YG LK E G+HR+ RI   + + R HTS  S+ + P   
Sbjct: 186 ITESDMKGYKEASAAICGASVYGKLKFESGIHRVQRIPITEKSGRIHTSAISVAILPQ-A 244

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           D +++++   D RIDTYR+ G+GGQH NTT+SAVRI H+PTG++V  Q ERSQH N+A+A
Sbjct: 245 DEVDVQLRNEDLRIDTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKA 304

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKT 333
             +L A+LYE+E  + +   +   S   +IG G +   IR+Y   P   V D R  I   
Sbjct: 305 LKVLCARLYEIERLRIQSSRSKLRSD--QIGSGDRSGRIRTYNF-PQGRVTDHRVGITHH 361

Query: 334 SPSDVLDGD-LDDFMKATL 351
           +  D++ G+ LD F+ A L
Sbjct: 362 AIEDMMQGENLDMFIDALL 380


>gi|299739044|ref|XP_001835016.2| peptide chain release factor 1 [Coprinopsis cinerea okayama7#130]
 gi|298403596|gb|EAU86782.2| peptide chain release factor 1 [Coprinopsis cinerea okayama7#130]
          Length = 345

 Score =  165 bits (418), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 111/332 (33%), Positives = 173/332 (52%), Gaps = 15/332 (4%)

Query: 26  LNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL 85
           ++    D     +V   K + +E + L  A    KE +  L +   LL            
Sbjct: 4   ISEDMSDKD---DVSRLKQV-KESEPLQEAWDQWKETRKLLDETNALLSDPDPSMRAMAS 59

Query: 86  QETSDNLQRIKLEVEYKQ-FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
           +E++     ++  VE       L         A LE+ +G GG+ES  +A  LLRMY R 
Sbjct: 60  EESTALNSTLQTLVESTFPSLLLPPSPTAQLSALLELKSGVGGSESSLFAGDLLRMYQRL 119

Query: 145 AEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
           A +R +K E    +D ++ G+K   + IKG  AY  L+ E GVHR+ R+   +S  R HT
Sbjct: 120 AVQRGWKAEIAAKNDTDDGGVKDVIMEIKGVGAYDALRWESGVHRVQRVPATESKGRVHT 179

Query: 205 SFSSIWVYPVVDDSI---EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           S  ++ V P+V+++    E      D +I+  RA GAGGQHVN T+SAVR+THIP+G+ V
Sbjct: 180 SAVAVLVLPLVEENDTHGEDLFKMEDVKIEVMRARGAGGQHVNRTESAVRLTHIPSGITV 239

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WGRQIRSYVLQ 318
             Q ERSQH+N+ +A+ +LR++L  L+ +   E+A    + +  +       +IR+Y   
Sbjct: 240 SMQDERSQHQNRRRAFQVLRSRL--LDQKIHREMAERRATRRNLVSGSDRSDKIRTYNF- 296

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKA 349
           P + V D R  +  T+ S VL+G+ L+DF+ A
Sbjct: 297 PQERVTDHRIGLTLTNLSSVLEGEGLEDFIDA 328


>gi|215764957|dbj|BAG86654.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 314

 Score =  165 bits (417), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 114/304 (37%), Positives = 169/304 (55%), Gaps = 10/304 (3%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL--LSGE 111
           + I  ++  Q+ +     L+  ++EE D   +          + +    +         E
Sbjct: 2   DMIEELRSKQEEIEGLKSLMTNSVEEKDFREMAAQELLQALEEEKQLQHKLFRSLLPKDE 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           AD  D  LEV AG GG E+  +A  + +MY ++++K  +K +A++I +    G K A+  
Sbjct: 62  ADERDCILEVRAGTGGEEASLFAMDIFKMYEKYSQKNGWKFDAIDIMESALKGYKEASGT 121

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRID 231
           I GP AYG LK E G+HR+ R+   + + R HTS  S+ + P   D +++++   D RID
Sbjct: 122 ISGPGAYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAILPQ-ADEVDVQLRNEDLRID 180

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           TYR+ G+GGQ VNTTDSAVRITH+PTG VV  Q ERSQH+NKA+A  +LRA+LYE+E  +
Sbjct: 181 TYRSGGSGGQSVNTTDSAVRITHVPTGTVVAIQDERSQHQNKAKALKVLRARLYEIERHR 240

Query: 292 REEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFM 347
                +   S   +IG G    +IR+Y   P   V D R  I   S  DV++G+ LD F+
Sbjct: 241 LHMDRSKLRSE--QIGSGDRSERIRTYNF-PQGRVTDHRVGITHHSIEDVMEGESLDIFI 297

Query: 348 KATL 351
            A L
Sbjct: 298 DALL 301


>gi|292620387|ref|XP_002664272.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           [Danio rerio]
 gi|220679232|emb|CAX12803.1| novel protein similar to H.sapiens MTRF1L, mitochondrial
           translational release factor 1-like (MTRF1L) [Danio
           rerio]
          Length = 431

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 108/304 (35%), Positives = 155/304 (50%), Gaps = 9/304 (2%)

Query: 49  RQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL 108
             HL + I  ++  Q  + D   LL+    E       E    L  I+   +      + 
Sbjct: 110 LAHLVHNIKKLEVKQKEMEDMQDLLKDNDPELLELAETEKEAVLADIQDLRQKILSLLIP 169

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
             E+D ++  LEV AG GG E+  +   +  MY  +A    +  + LE +  E  G++ A
Sbjct: 170 EEESDMSELVLEVSAGVGGQEAMLFTAEIFEMYQNYAAFNGWSFDVLEANASELGGVRHA 229

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
           +  + GP +Y  LK E GVHR+ R+   +S  R HTS  ++ + P     I   I+  D 
Sbjct: 230 SASVSGPLSYKKLKFEAGVHRVQRVPKTESKGRTHTSTMTVAILP-QPTEISFTINPKDL 288

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           +I+T RASGAGGQHVNTTDSAVRITH+PTG V +CQQERSQ KNK  A  +LRAKLY   
Sbjct: 289 KIETKRASGAGGQHVNTTDSAVRITHLPTGTVAECQQERSQIKNKDTAMKLLRAKLYSAR 348

Query: 289 LQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--L 343
           L+  EE +   ++ K +I   G   +IR+Y  Q    + D R           L G+  L
Sbjct: 349 LE--EETSRRYQARKLQIGTRGRSEKIRTYNFQ-QDRITDHRIGKTVHDVHGFLQGEELL 405

Query: 344 DDFM 347
           ++ +
Sbjct: 406 EEMI 409


>gi|266622716|ref|ZP_06115651.1| peptide chain release factor 2 [Clostridium hathewayi DSM 13479]
 gi|288865539|gb|EFC97837.1| peptide chain release factor 2 [Clostridium hathewayi DSM 13479]
          Length = 275

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 129/273 (47%), Positives = 194/273 (71%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E+P  W++  ++  +++  ++L + ++  K+++ +  D  +++E+  EE+D S++ E  
Sbjct: 1   MEEPGFWEDPEKSTKIVQLAKNLKDTVNGYKDLEQQYEDIGVMIEMGNEENDPSVVPEVE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
           + L+  K ++E  +  +LLSGE DS++A L ++AGAGGTES DW +ML RMY RWAEK+ 
Sbjct: 61  EMLKEFKDKLEEIRINTLLSGEYDSDNAILRLNAGAGGTESCDWCSMLYRMYCRWAEKKG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           +  E L+  DGEEAGIKS T+ I G NA+G+LK E+GVHRLVRISP+++  +R TSF S 
Sbjct: 121 YSVEVLDYLDGEEAGIKSVTIQINGENAFGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P +++ ++++I+E D RIDTYR+SGAGGQH+N T SA+RITH+PTG+VVQCQ ERSQ
Sbjct: 181 DVMPDIEEDLDVDINEEDLRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANIGESS 302
            +NK +A  ML+AKLY L+ Q+  E  +     
Sbjct: 241 FQNKDKAMQMLKAKLYMLKQQENAEKLSDIRGD 273


>gi|326493842|dbj|BAJ85383.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 236

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 97/213 (45%), Positives = 141/213 (66%), Gaps = 1/213 (0%)

Query: 143 RWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           RW  K+++K+  +E   GEEAGIKSAT+ ++G  AYG+L GE+G HR+VR SP+++   R
Sbjct: 13  RWGGKQRYKSRVVEKSPGEEAGIKSATVELEGRYAYGYLSGEKGTHRIVRQSPFNAKGLR 72

Query: 203 HTSFSSIWVYPV-VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
            TSF+ + V P+  ++S+++EI E D  I   RA G GGQ+VN  ++AVR+ HIPTG+ V
Sbjct: 73  QTSFAGVEVMPLLPEESLDVEIPEEDLDISFTRAGGKGGQNVNKVETAVRMVHIPTGIAV 132

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQ 321
           +C +ERSQ  NK +A   L+AKL  +  ++R            +  WG+QIR+YV  PY+
Sbjct: 133 RCAEERSQLANKIKALRRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 192

Query: 322 MVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +VKD+RT  E +  S V+DG+LD F+KA L  K
Sbjct: 193 LVKDVRTACETSDISGVMDGELDPFIKAYLQYK 225


>gi|50309221|ref|XP_454617.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|1172907|sp|P41767|RF1M_KLULA RecName: Full=Peptide chain release factor 1, mitochondrial;
           Short=MRF-1; Short=MtRF-1; Flags: Precursor
 gi|641909|gb|AAB18362.1| peptide termination factor [Kluyveromyces lactis]
 gi|49643752|emb|CAG99704.1| KLLA0E14807p [Kluyveromyces lactis]
          Length = 396

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 98/341 (28%), Positives = 151/341 (44%), Gaps = 20/341 (5%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
             L  L         + ++ +     +    L   +    + ++ +     L E+   + 
Sbjct: 45  NELRELEDLLSQGGSF-DLEK----QKNFAKLSTIVDSYSKYREEVNQYKELQEILELDP 99

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTESQDWANMLL 138
                 E         L        + L          + LE+  G GG+E+  +   LL
Sbjct: 100 SLREEAEADIAALLPDLNKTGDSLLNKLLPPHPFADKPSILELRPGVGGSEAMIFTQDLL 159

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            MY  +A   K+K   +   +     G+  A L I  P +Y  LK E GVHR+ R+   +
Sbjct: 160 NMYINYANYHKWKWNLISKTENASGSGVLEAILNIDEPGSYDKLKFEAGVHRVQRVPATE 219

Query: 198 SNSRRHTSFSSIWVYPVVDDSIE-----IEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           S  R HTS +++ V P + +  E           + RID  RASG GGQHVNTTDSAVR+
Sbjct: 220 SKGRTHTSTAAVIVLPKMGEESESDAYERTFKPDEIRIDVMRASGKGGQHVNTTDSAVRL 279

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WG 309
           TH P+G+V+  Q+ERSQH+NKA+A+ +LRA+L E E    E+      + K ++      
Sbjct: 280 THYPSGIVISMQEERSQHRNKAKAFAILRARLAEKER--LEKEEKERNARKDQVSTTDRS 337

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKA 349
            +IR+Y   P   + D R          V+ G+ LDD + A
Sbjct: 338 DKIRTYNY-PQNRITDHRCGFTLYDIEGVMKGERLDDVIDA 377


>gi|167842463|gb|ACA03159.1| RF1 [Dictyostelium fasciculatum]
          Length = 515

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 114/341 (33%), Positives = 177/341 (51%), Gaps = 13/341 (3%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
             +   L    E   L     E K + +E   L   ++  K +  +  +   L E+  E 
Sbjct: 164 ETKFDGLQRLIESQSL--PQSEIKKVSKELDELREQVNSWKVLLVKCQELRELEEMVSEV 221

Query: 80  DDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
            D    +  + +L+ +  +V+  +       L S + D  +A +E+ AG GG+E+Q +A 
Sbjct: 222 KDKEEKELMNQDLKEMVEQVKDSERALVMSLLPSDKDDEGNAIMEIRAGTGGSEAQLFAL 281

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAG---IKSATLLIKGPNAYGWLKGEQGVHRLVR 192
            +L MY  +A+   +K E LEI   +  G    + A+  I G   +G+LK E GVHR+ R
Sbjct: 282 EMLGMYEGYAQTMGWKFEVLEIGWTDAVGNKACRDASASISGRGVFGFLKNESGVHRVQR 341

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           I   ++  R HTS  ++ + P     ++I+I +S+ RID YR+SG GGQ VNTTDSAVRI
Sbjct: 342 IPETETMGRVHTSTVTVAILP-EPKEVDIKIRDSELRIDVYRSSGNGGQSVNTTDSAVRI 400

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQ 311
           TH+PTG VV  Q ERSQ  N+A+A  +LRA+LYE E  +     +   SS+  +     +
Sbjct: 401 THLPTGTVVAMQDERSQLMNRAKAMKILRARLYEAERSRLHNERSSHRSSQIGDASRSEK 460

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
           IR+Y   P   V D R NI   +   V+ G+ L+D ++  +
Sbjct: 461 IRTYNF-PQDRVTDHRVNISTNNIESVMAGESLNDLIEEII 500


>gi|301613862|ref|XP_002936423.1| PREDICTED: peptide chain release factor 1-like, mitochondrial
           [Xenopus (Silurana) tropicalis]
          Length = 420

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 103/245 (42%), Positives = 142/245 (57%), Gaps = 9/245 (3%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E++ ND  +EV AG GG E+  +   +  MY  +A  + +  + LE    E  G++ AT+
Sbjct: 156 ESEDNDLIMEVTAGVGGQEAMLFTAEMFDMYQHYAVHKNWSFDLLEYFSSELGGLRHATV 215

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G +AY  LK E GVHR+ R+   +   R HTS  ++ + P     I + I+  D RI
Sbjct: 216 SIGGQDAYKCLKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQ-PSEINLVINPKDLRI 274

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           +T RASGAGGQHVNTTDSAVRI HIPTGVV +CQQERSQ KNK +A  +LRAKLY ++L+
Sbjct: 275 ETKRASGAGGQHVNTTDSAVRIVHIPTGVVSECQQERSQIKNKEKAMQVLRAKLYTMKLE 334

Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345
             EE +    + K +I   G   +IR+Y   P   V D R      +    L G+  LDD
Sbjct: 335 --EETSKRYNARKIQIGTRGRSEKIRTYNY-PQDRVTDHRIGKSLHNIEGFLFGEELLDD 391

Query: 346 FMKAT 350
            +++ 
Sbjct: 392 LIQSL 396


>gi|302307223|ref|NP_983812.2| ADL284Cp [Ashbya gossypii ATCC 10895]
 gi|299788896|gb|AAS51636.2| ADL284Cp [Ashbya gossypii ATCC 10895]
          Length = 397

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 98/346 (28%), Positives = 154/346 (44%), Gaps = 20/346 (5%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
             L  L         +          ++   L + +   +  QD +     L ++  ++ 
Sbjct: 44  AELETLEKLLSKGESFD-----VEKQKKYSKLSSIVDTFRAYQDNVHMYRELQDMIAQDA 98

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTESQDWANMLL 138
                 +   +     L          L            +E+  G GG E+  +   LL
Sbjct: 99  SLRTEAQAELDELAPTLARSADTLLDKLLPPHPFAEKPCIVELRPGVGGIEAMIFTQDLL 158

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            MY  +A+  ++K       +     G+  A L I  P +Y  LK E GVHR+ RI   +
Sbjct: 159 NMYIGYAQHHRWKWSVTSATENTTGAGLSEAILSIDEPGSYDRLKFESGVHRVQRIPATE 218

Query: 198 SNSRRHTSFSSIWVYPVVDDSIE-----IEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           S  R HTS +++ V P + +  E           + RID  RASG GGQHVNTTDSAVRI
Sbjct: 219 SKGRTHTSTAAVVVLPKMAEEAESDAYERTFKPGEIRIDVMRASGKGGQHVNTTDSAVRI 278

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WG 309
           TH P+G+ +  Q+ERSQH+NKA+A+ +LRAKL +LE   +E  A    + K ++      
Sbjct: 279 THFPSGIAIHMQEERSQHRNKAKAFQILRAKLADLER--KEREARERSARKDQVSSTDRS 336

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLAIK 354
            +IR+Y   P   V D R  +   + ++V+ G+ LD+ + +     
Sbjct: 337 DKIRTYNF-PQNRVTDHRCAVSLHALAEVVTGERLDELIDSMARYD 381


>gi|145629736|ref|ZP_01785532.1| peptide chain release factor 1 [Haemophilus influenzae 22.1-21]
 gi|144978073|gb|EDJ87852.1| peptide chain release factor 1 [Haemophilus influenzae 22.1-21]
          Length = 267

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 93/257 (36%), Positives = 137/257 (53%), Gaps = 1/257 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +R   L     D  +  +  + +   +E   L+  +           +      L
Sbjct: 10  LESLKERYEELEALLGDVSVISDQDKFRAYSKEYSQLEEVVKCFNRWTQLNQNIEEAEIL 69

Query: 76  ALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q   +  +  I+   +  Q   L     D  + YLE+ AG GG E+  +A
Sbjct: 70  LDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFA 129

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE +++  E L  ++ E+ G K   +L+ G   YG LK E G HR+ R+ 
Sbjct: 130 GDLFRMYSRYAESKRWSMEVLSENESEQGGFKEIIVLVSGEGVYGQLKFESGGHRVQRVP 189

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + +S   EI+ +D RIDTYR+SGAGGQHVNTTDSAVRITH
Sbjct: 190 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 249

Query: 255 IPTGVVVQCQQERSQHK 271
           IPTG+VV+CQ ERSQHK
Sbjct: 250 IPTGIVVECQDERSQHK 266


>gi|302829783|ref|XP_002946458.1| hypothetical protein VOLCADRAFT_103042 [Volvox carteri f.
           nagariensis]
 gi|300268204|gb|EFJ52385.1| hypothetical protein VOLCADRAFT_103042 [Volvox carteri f.
           nagariensis]
          Length = 400

 Score =  164 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 106/350 (30%), Positives = 156/350 (44%), Gaps = 40/350 (11%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLE---V 99
           + + RE   L    +  + +     +   L  L  + D         +  +  +      
Sbjct: 26  RDVGREYSLLKPLATAYERLLRVRRELEDLAALLKDPDSRVRAMAEEEGRELQQQAAGLT 85

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
                  +     D   A LE+ AGAGG E+  +   LL MY ++A  R +  + +E+  
Sbjct: 86  RRLLLALVPRDPRDGRAALLEMRAGAGGQEAALFCGELLEMYRKFAMSRGWSWQVVELTA 145

Query: 160 GEE-AGIKSATLLIKGPN-------------------------------AYGWLKGEQGV 187
            E   G+K     +                                    YG L  E GV
Sbjct: 146 SEVPGGVKHVVAAVADGRGAGRRAGEIGDGGEGYDGGEGNGDQDGDAIGVYGTLLPESGV 205

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS  ++ V P   D +++++ + D RI+T RASGAGGQHVN TD
Sbjct: 206 HRVQRVPVTEAQGRVHTSTVAVVVLPQ-ADEVDVKLRDEDLRIETMRASGAGGQHVNVTD 264

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS-KTEI 306
           SAVRITH+PTG+VV CQ ERSQH N+A A  +LRA+LY+LE+QKR +  +   S+     
Sbjct: 265 SAVRITHVPTGLVVSCQNERSQHLNRAAALKILRARLYDLEMQKRAKEMDEQRSALVASA 324

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAIK 354
               +IR+Y   P   V D RT++       VL G   L   M    A +
Sbjct: 325 DRSERIRTYNF-PQGRVTDHRTHLTLHDLDSVLVGGEGLQRLMGVLRAAR 373


>gi|115403013|ref|XP_001217583.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114189429|gb|EAU31129.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 447

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 101/361 (27%), Positives = 156/361 (43%), Gaps = 30/361 (8%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           +       L+ K ED     +   AK +  E   +   +       + + +   +LE   
Sbjct: 49  SLAAEHKSLSAKLED-SF--DAKTAKRIG-ELAAITKVLKEWDTANESIAELKSMLEDPD 104

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN--DAYLEVHAGAGGTESQDWAN 135
            + +   L        +  L V     +  L            LE+  GAGG E+  +A 
Sbjct: 105 TDGELRSLAVEDLESSKNNLPVLSDSLKQALVPRHPFAELPCLLEIRPGAGGDEAGLFAF 164

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAG---IKSATLLIKGPNAYGWLKGEQGVHRLVR 192
            LLRMYT +  +R F++  +++   + AG   +  A L ++   AY  L+ E GVHR+ R
Sbjct: 165 ELLRMYTAFCSRRGFRSSVIKLDVADGAGDDRLTEAILEVEANGAYDVLRTESGVHRVQR 224

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVD--------------DSIEIEISESDCRIDTYRASGA 238
           +   +S  R HTS  S+ V P                  + +  +   + R +  RA GA
Sbjct: 225 VPATESKGRTHTSAVSVMVLPSFPDSGAGSDSALNVDDPNSDYYVDPQEVRSEKMRAGGA 284

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVN T+SA+R+THIPTG+VV  Q  RSQH N+ +AW +LRA+L E   + RE+    
Sbjct: 285 GGQHVNKTESAIRLTHIPTGIVVSMQDSRSQHANRKKAWQILRARLAEARQEAREQELVE 344

Query: 299 GE----SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLA 352
                      +G G +IR+Y         D R+     +   VLDG   L+  M +   
Sbjct: 345 LRRGVMGGVARMGRGDKIRTYNYG-QSRCTDHRSGTTIHNLDSVLDGGDGLETVMDSVRT 403

Query: 353 I 353
            
Sbjct: 404 W 404


>gi|323172435|gb|EFZ58072.1| peptide chain release factor 1 [Escherichia coli LT-68]
          Length = 227

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 90/219 (41%), Positives = 135/219 (61%), Gaps = 6/219 (2%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ R+   +S 
Sbjct: 1   MYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQ 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+
Sbjct: 61  GRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGI 120

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316
           VV+CQ ERSQHKNKA+A ++L A+++  E+ KR++      + +  +G G    + R+Y 
Sbjct: 121 VVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDRNRTYN 178

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             P   V D R N+      +V++G LD  ++  +   +
Sbjct: 179 F-PQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 216


>gi|322699423|gb|EFY91185.1| putative translation releasing factor RF-1 [Metarhizium acridum
           CQMa 102]
          Length = 800

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 94/368 (25%), Positives = 150/368 (40%), Gaps = 39/368 (10%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
                    L           +  +A    R    L    + +   Q  L     L  +A
Sbjct: 421 KALSAEHEALQKSLNAQ---FDSQKA----RRAGELHRVAAALSAWQQSLSSIRDLQAMA 473

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQD 132
            +E D  +     D LQ  + ++   +                   +E   G GG E + 
Sbjct: 474 DDEQDPDLAAIARDELQAEEAKLGSLEKNLSASLTPRHPFADMPCMIEFRPGPGGLEGRY 533

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAG----------IKSATLLIKGPNAYGWLK 182
           + + L +MY     +R ++   L+    + AG          ++ A L I+   AY   +
Sbjct: 534 FTDSLFKMYKALCTRRGYRANVLKYEMADAAGDQSSSAGENPVQEAILEIQDQGAYDMFR 593

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD------------DSIEIEISESDCRI 230
            E G+HR+ RI   +S  R HTS  ++WV P                  +  ++  + ++
Sbjct: 594 SEAGMHRVQRIPSTESKGRVHTSAVAVWVLPSFPESSSGGEADADDPESDFYVNPQEVKV 653

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           +T RA GAGGQHVN T+SA+R+TH+PTG  V  Q  RSQ +N+  AW +LR+++     +
Sbjct: 654 ETMRARGAGGQHVNKTESAIRMTHLPTGTTVSMQDHRSQQRNREDAWKLLRSRIASQRAE 713

Query: 291 KREEIANIGESS---KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345
            R   A    +S   +T+I  G +IR+Y         D R  ++  +  DVLDG   LD 
Sbjct: 714 LRMHEAARLRNSVLAQTQITRGDKIRTYNYN-QDRCTDHRAGLDVHNLPDVLDGGETLDR 772

Query: 346 FMKATLAI 353
            M A    
Sbjct: 773 VMDAAKEW 780


>gi|326915756|ref|XP_003204179.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           [Meleagris gallopavo]
          Length = 393

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 107/306 (34%), Positives = 160/306 (52%), Gaps = 9/306 (2%)

Query: 50  QHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS 109
             L   I  +++ +  L D   L      ED   + +    + +    E++++    L+ 
Sbjct: 74  TELAARIQRLRDKERELRDTRELALQDESEDLRKLAEREIVSCEEEIAELKHQIVLLLIP 133

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            E  ++D  +EV AG GG E+  + + +  MY R+A  +K+K E LE    E  G++ A 
Sbjct: 134 SEETNSDLVMEVTAGVGGQEAMLFTSEIFDMYRRYAAYKKWKFEILEYFPSEIGGLRHAV 193

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G +AY ++K E GVHR+ R+   +   R HTS  ++ + P   +     I+  D R
Sbjct: 194 ASIAGLDAYKYMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEMELK-INPKDLR 252

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           I+T RASGAGGQHVNTTDSAVRI HIPTGV  +CQQERSQ +NK +A  ML AKLY ++L
Sbjct: 253 IETKRASGAGGQHVNTTDSAVRIVHIPTGVASECQQERSQIRNKEKAMQMLCAKLYNIKL 312

Query: 290 QKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LD 344
           +  EE        K +I   G   +IR+Y   P   + D R +         + G+  LD
Sbjct: 313 E--EETKKRNSVRKIQIGTKGRSEKIRTYNF-PQDRITDHRISRSVHHIECFMLGEEMLD 369

Query: 345 DFMKAT 350
           + ++  
Sbjct: 370 EMIQTL 375


>gi|76664975|emb|CAJ17928.1| protein chain release factor 2 [Candidatus Phytoplasma solani]
          Length = 175

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 95/165 (57%), Positives = 122/165 (73%), Gaps = 1/165 (0%)

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR+SP+DSN++RHTSF S  V P + D I+I +   D +ID +R+SGAGGQHVNTTD
Sbjct: 1   HRLVRVSPFDSNAKRHTSFVSCDVLPEIKDEIKINVKPEDLKIDVFRSSGAGGQHVNTTD 60

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA-NIGESSKTEI 306
           SAVRITH+PTG+VV CQ ERSQ KN+ +A  ML+ KL++L L++++E      +S + EI
Sbjct: 61  SAVRITHLPTGLVVGCQNERSQIKNREKALQMLKTKLFQLALKEQKEETVKQFQSDQKEI 120

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           GWG QIRSYV  PY+MVKD RTN E      V+DG+LDDF+   L
Sbjct: 121 GWGSQIRSYVFHPYKMVKDHRTNQENFQLEQVMDGNLDDFINGYL 165


>gi|94984716|ref|YP_604080.1| peptide chain release factor 1 [Deinococcus geothermalis DSM 11300]
 gi|119361533|sp|Q1J0S3|RF1_DEIGD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|94554997|gb|ABF44911.1| peptide chain release factor 1 [Deinococcus geothermalis DSM 11300]
          Length = 370

 Score =  162 bits (410), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 102/349 (29%), Positives = 154/349 (44%), Gaps = 13/349 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +        +     DP +  +  E   L R  + L   ++  +E      D     EL
Sbjct: 6   LEELAAEFGLVERALGDPAMLADPREYARLTRRHRELTPIVTLYREHAVLSSDLEGAREL 65

Query: 76  ALEEDDCS-ILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D       E      R+       +   L +   D+ +  LE+ AGAGG E+  +A
Sbjct: 66  LADPDMRELAQGEIESLSARLAQIEAELEVLLLPTDPDDAKNVILELRAGAGGAEAALFA 125

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LLRMYTR+AE    K   L+  + +  G       + G  A+   K E+GVHR+ R+ 
Sbjct: 126 VDLLRMYTRYAEGAGLKLNVLDASESDLGGASKVVAEVTGEFAFRAFKWERGVHRVQRVP 185

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P  +      +  S+ RID +R+ GAGGQ VNTTDSAVR  +
Sbjct: 186 ATESQGRIHTSTVTVAVLPEAEQGEVS-VDPSEVRIDVFRSQGAGGQGVNTTDSAVRAVY 244

Query: 255 IP---TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
            P     +VV CQ  RSQ KN+ +A  +L ++L E E   REE      +   ++G G +
Sbjct: 245 RPGTPDEIVVVCQDSRSQIKNREKALVVLASRLAERERAAREERERETRA--AQVGTGER 302

Query: 312 ---IRSYVLQPYQMVKDLRTNIEKTS--PSDVLDGDLDDFMKATLAIKK 355
              IR+Y   P   V D R   +  +     V+ G L   + A    ++
Sbjct: 303 SEKIRTYNY-PQNRVTDHRLEGDAKNFALDSVMAGGLAPIVAALSRDER 350


>gi|50730809|ref|XP_417026.1| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 455

 Score =  162 bits (410), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 101/352 (28%), Positives = 157/352 (44%), Gaps = 21/352 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +    ++         +N  E + L R R  L    +  +EI++   +   L  +
Sbjct: 86  LETLSKEYQQVDHLLNADS--KNEFEQRTLRRRRADLSPVATAFQEIREAESELQELETM 143

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-------LSGEADSNDAYLEVHAG--AG 126
             E D     Q     L+  +   +                 + D +   LEV AG   G
Sbjct: 144 CRELDSRDEKQLLELALEEKETLDKKINTLCRKLFQLLVPKEKYDKSHVILEVTAGRTTG 203

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G   Q +   +  MY  +A+ + +  + L     E  G+  A   I G + Y  LK E G
Sbjct: 204 GDICQQFTKEMFEMYQNYADYKCWTFDILNYVPAEIGGLHHAAAHISGDDVYRHLKYEGG 263

Query: 187 VHRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            HR+ RI     +SR     + +   +     + +++++   D RIDT+RA GAGGQHVN
Sbjct: 264 THRVQRIPETGLSSRMQRIHTGTMSVIVLPQPEEVDVKVDPKDLRIDTFRAKGAGGQHVN 323

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            TDSAVRI H+PTGVVV+CQQERSQ  NK  A   LRAKLY+  ++K+        + K 
Sbjct: 324 KTDSAVRIVHLPTGVVVECQQERSQQMNKEIALRTLRAKLYQQIIEKQLSQEQ--SARKL 381

Query: 305 EIGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351
           ++G      +IR+Y       V D R + +  +  ++L G  +LD  +   L
Sbjct: 382 QLGTRAQSERIRTYNF-TQDRVTDHRISYDARNIKEILSGKEELDKLINRLL 432


>gi|118088382|ref|XP_419682.2| PREDICTED: similar to Mitochondrial translational release factor
           1-like [Gallus gallus]
          Length = 394

 Score =  162 bits (409), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 109/316 (34%), Positives = 162/316 (51%), Gaps = 10/316 (3%)

Query: 41  EAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK-LEV 99
           +A++    +  L   I  +++ +  L D   L      ED   + +    + +       
Sbjct: 65  KARVQGEAKPELAARIQRLRDKERELQDTRELALQDESEDLRKLAEREIVSCEEEIAELK 124

Query: 100 EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
                  + S E D++D  +EV AG GG E+  + + +  MY R+A  +K+K E LE   
Sbjct: 125 HQIVLLLIPSEETDNSDLVMEVTAGVGGQEAMLFTSEIFDMYRRYAAYKKWKFEILEYFP 184

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
            E  G++ A   I G +AY ++K E GVHR+ R+   +   R HTS  ++ + P   +  
Sbjct: 185 SEIGGLRHAVASIAGLDAYKYMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEME 244

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
              I+  D RI+T RASGAGGQHVNTTDSAVRI HIPTGV  +CQQERSQ +NK +A  M
Sbjct: 245 LK-INPKDLRIETKRASGAGGQHVNTTDSAVRIVHIPTGVTSECQQERSQIRNKEKAMQM 303

Query: 280 LRAKLYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
           L AKLY ++L+  EE      + K +I   G   +IR+Y   P   + D R +       
Sbjct: 304 LCAKLYNIKLE--EENKKRNSARKIQIGTKGRSEKIRTYNF-PQDRITDHRISRSVHHTE 360

Query: 337 DVLDGD--LDDFMKAT 350
             + G+  LD+ +K  
Sbjct: 361 CFMLGEEMLDEMIKTL 376


>gi|156055958|ref|XP_001593903.1| hypothetical protein SS1G_05331 [Sclerotinia sclerotiorum 1980]
 gi|154703115|gb|EDO02854.1| hypothetical protein SS1G_05331 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 490

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 94/342 (27%), Positives = 156/342 (45%), Gaps = 33/342 (9%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL-----QRIKLE 98
            + +    L +  + +K+ ++       L  L  +      L+E +          ++  
Sbjct: 130 KVAKRIGELQDVATALKKWEETKESLSELDALLQDSSTDEELRELAVEDLTTTTAHLEEL 189

Query: 99  VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
                               +E+  GAGG E+  +A  LLRMY  +  +++F++  ++  
Sbjct: 190 SRNLTTSLTPKHPFAELPCLVEIRPGAGGGEAAIFAADLLRMYRAYCARKRFRSTIIKYE 249

Query: 159 DGEEAG------IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
             +  G      I    L I+ P +Y  L+GE GVHR+ R+   +   R HTS  S+ V 
Sbjct: 250 TADGEGAGSDSPISEVVLEIETPGSYDSLRGEAGVHRVQRVPATEKQGRTHTSAVSVMVL 309

Query: 213 PVVD----------------DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           P                    + +  ++ +D R D  RA GAGGQHVNTTDSAVR+TH+P
Sbjct: 310 PSFPTTGQEGQEYWEADLNDPNSDYYVNPADVRTDVMRARGAGGQHVNTTDSAVRLTHVP 369

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS---KTEIGWGRQIR 313
           T  VV  Q+ RSQ +N+ +AW +LR++L   + + REE       S     ++G G +IR
Sbjct: 370 TNTVVSMQEGRSQLQNRQKAWQVLRSRLAAAKREAREEQLINLRRSVIGVAKMGRGDKIR 429

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
           +Y     Q V D R+ +   +  DV++G  +L+  + +  A 
Sbjct: 430 TYNWG-QQRVTDHRSGLSVHNLDDVMEGGDELEKVIDSVKAW 470


>gi|229032803|ref|ZP_04188759.1| Peptide chain release factor 2 [Bacillus cereus AH1271]
 gi|228728476|gb|EEL79496.1| Peptide chain release factor 2 [Bacillus cereus AH1271]
          Length = 272

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 138/269 (51%), Positives = 179/269 (66%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
                 W +   A+ ++ E   L   +   +++ +   +  I  EL  EE D  + +E  
Sbjct: 1   MMGAGFWDDQQGAQAVINEANALKEMVGKFRQLDETFENLEITHELLKEEYDEDLHEELE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             ++ +  E+   + + LLS   D N+A LE+H GAGGTESQDW +MLLRMYTRWAEKR 
Sbjct: 61  SEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FK E ++   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS+ RRHTSF S 
Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180

Query: 210 WVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQ 269
            V P  +D +EIEI   D +IDTYRASGAGGQH+NTTDSAVRITH PT  VV CQ ERSQ
Sbjct: 181 EVVPEFNDEVEIEIRSEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSERSQ 240

Query: 270 HKNKAQAWNMLRAKLYELELQKREEIANI 298
            KN+  A  ML+AKLY+ +L++++   + 
Sbjct: 241 IKNREHAMKMLKAKLYQKKLEEQQAELDE 269


>gi|330919897|ref|XP_003298803.1| hypothetical protein PTT_09620 [Pyrenophora teres f. teres 0-1]
 gi|311327840|gb|EFQ93110.1| hypothetical protein PTT_09620 [Pyrenophora teres f. teres 0-1]
          Length = 416

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 103/359 (28%), Positives = 165/359 (45%), Gaps = 28/359 (7%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
                   L  K  +     +   AK L  E   + +A+    +  + + +   ++  + 
Sbjct: 46  AITSEHKELTEKLAN-GF--DTRAAKKLG-EYSPIVSALGEWDKANESVTELTSMIHDST 101

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND--AYLEVHAGAGGTESQDWAN 135
            + +   L        R +L    +   + L            LE+  GAGG+E+  +A 
Sbjct: 102 TDPELRSLASDDLEETRTQLVNASQSLITSLVPVHPFAHLPCLLEIRPGAGGSEAAIFAG 161

Query: 136 MLLRMYTRWAEKRKFKTE---ALEIHDGEEAGI--KSATLLIKGPNAYGWLKGEQGVHRL 190
            L RMY+ +  +  F+T       I+   EAG+    A + ++  NAYG  + E GVHR+
Sbjct: 162 DLFRMYSAFCNRNGFRTNLIKYENINGTSEAGVPLSEAIMEVENENAYGVFRCEAGVHRV 221

Query: 191 VRISPYDSNSRRHTSFSSIWVYP-----------VVDDSIEIEISESDCRIDTYRASGAG 239
            R+   ++  R HTS +S+ V P             +   +  I   + +++  RASGAG
Sbjct: 222 QRVPATETKGRTHTSAASVHVLPSLQENSAEEQDFDNPESDYYIDPKEVKLEVMRASGAG 281

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQHVN T+SAVR+THIPT  VV  Q  RSQHKNK +AW +LRA++ +   +KREE     
Sbjct: 282 GQHVNKTESAVRLTHIPTNTVVAMQDSRSQHKNKEKAWALLRARIAQTRREKREEEMANM 341

Query: 300 ESS---KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATLAI 353
             S     ++G G ++R+Y     Q V D R+ +      DV+ G   LD  M++  + 
Sbjct: 342 RRSVIGVAKMGRGDKVRTYNWG-QQRVTDHRSGMTVHDLDDVMGGGQTLDKVMESVRSW 399


>gi|47218188|emb|CAF97052.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 409

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 108/305 (35%), Positives = 156/305 (51%), Gaps = 12/305 (3%)

Query: 50  QHLDNAISFIKEIQDRLCDNLILLELALEEDDCSIL---QETSDNLQRIKLEVEYKQFES 106
             L   I  I+E++ +  + +    L  +ED         E  + ++ I+   +      
Sbjct: 89  SLLAPLIRSIRELETKQMEMVETETLLEDEDPALRELAETERENCVKDIQDLSKKILDLL 148

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           +   EAD N+  LEV AG GG E+  +   +  MY  +A+   +  + LE    +  G++
Sbjct: 149 IPEEEADLNELVLEVTAGVGGQEAMLFTAEVFDMYQGYAQHHGWSFDTLEYMTSDLGGLR 208

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            A+  I G   Y  +K E GVHR+ R+   +   R HTS  ++ V P     I   I++ 
Sbjct: 209 HASASISGRLCYKKMKFEGGVHRVQRVPKTEKQGRMHTSTMTVAVLP-QPTEISFTINQK 267

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+ +A   LRAKLY 
Sbjct: 268 DLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVAECQQERSQLKNREKAMKALRAKLYS 327

Query: 287 LELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD- 342
           L+L+  EE +      K +I   G   +IR+Y       + D R  +      + L G+ 
Sbjct: 328 LKLE--EETSKRYNQRKIQIGTKGRSEKIRTYNFA-QDRITDHRIGMTLHDIKNFLLGED 384

Query: 343 -LDDF 346
            LD+ 
Sbjct: 385 LLDEM 389


>gi|39961534|ref|XP_364694.1| hypothetical protein MGG_09539 [Magnaporthe oryzae 70-15]
 gi|145011042|gb|EDJ95698.1| hypothetical protein MGG_09539 [Magnaporthe oryzae 70-15]
          Length = 425

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 92/364 (25%), Positives = 165/364 (45%), Gaps = 32/364 (8%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           N       L+T+ E  +   +  +AK  M E   + +A+      Q  + +   L +   
Sbjct: 36  NLTDEHDQLHTELEA-NF--DSTKAKR-MGEISKVADALKAWDAAQASINELTGLSKSQD 91

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
           EE      +E       +    +  +               +E   G GG E + + + L
Sbjct: 92  EEMRELAKEELETTNNELGTLSDKIKIALTPKHPFADMPCLIEFRPGPGGMEGRLFTDAL 151

Query: 138 LRMYTRWAEKRKFKTEALEIH-------DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
            +MY  +   + ++T+ +             E  ++ A L +  P +Y   +GE G+HR+
Sbjct: 152 FKMYQSYCTFKGYRTKTVTYERVDGPPGADGETPLQEAILEVINPGSYDIFRGEAGMHRV 211

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVD---------------DSIEIEISESDCRIDTYRA 235
            R+   + + R HTS +++WV P                   + +  I  ++ R++T RA
Sbjct: 212 QRVPATEKSGRIHTSAAAVWVLPSFPEEAGASDEGTTDVNDPNSDFYIDPTEVRVETMRA 271

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
            GAGGQHVN T+SA+R+TH+PTG +V  Q ERSQ +N+  AW +LR+++ +   ++REE+
Sbjct: 272 RGAGGQHVNKTESAIRLTHMPTGTMVSMQDERSQQRNREAAWKVLRSRIAQKRREQREEM 331

Query: 296 ANIGES---SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKAT 350
           A    S   SK +I  G +IR+Y     +   D R+ ++  +   V+ G  +LD  + + 
Sbjct: 332 AQNLRSSVLSKDKITRGEKIRTYNYV-QKRCTDHRSGLDIHNLPGVMMGGPELDRIIASV 390

Query: 351 LAIK 354
              +
Sbjct: 391 HEWQ 394


>gi|170114318|ref|XP_001888356.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164636668|gb|EDR00961.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 338

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 105/326 (32%), Positives = 164/326 (50%), Gaps = 11/326 (3%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
              P    +V+  K L +E + L  A     + +  L +   LL+          + E +
Sbjct: 1   MSSPE---DVLRLKQL-KESKALQTAWDEWTQTRQLLDNTAPLLDDPDPTMRSLAVDEYT 56

Query: 90  DNLQRIKLEVEYKQ-FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
                +   +E       +         A +E+ +G GG+ES  +   LLRMY R A   
Sbjct: 57  SLTSTLTQFLESTFPSLLVPPSTTSHLSALMEMKSGVGGSESSLFLGDLLRMYQRLANVN 116

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
           ++K + +  +D +  G K A + IKG  AY  L+ E GVHR+ R+   +S+ R HTS  S
Sbjct: 117 RWKAQVVAQNDNDGGGTKDAIIEIKGDGAYDALRFESGVHRVQRVPATESSGRVHTSTVS 176

Query: 209 IWVYPVVDDSIEIE---ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           I V P+V+++        S SD +++  RA GAGGQHVN T+SAVR+THIPTG+ V  Q 
Sbjct: 177 IVVLPLVEETDTQAEELFSMSDIKLEVMRARGAGGQHVNKTESAVRLTHIPTGITVSMQD 236

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVK 324
           ERSQH+N+ +A+ +LR++L + +L +  E       +         +IR+Y     + V 
Sbjct: 237 ERSQHQNRRRAFQVLRSRLLDKKLTREMEERRDTRRNLVRGADRSEKIRTYNFV-QERVT 295

Query: 325 DLRTNIEKTSPSDVLDGD-LDDFMKA 349
           D R  +   + S VL+GD + DF+ A
Sbjct: 296 DHRIGLTLMNLSSVLEGDGIQDFIDA 321


>gi|218459801|ref|ZP_03499892.1| peptide chain release factor 1 [Rhizobium etli Kim 5]
          Length = 230

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 89/221 (40%), Positives = 133/221 (60%), Gaps = 8/221 (3%)

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R+A ++ +K E L   +GE  G K     I G   +  LK E GVHR+ R+ 
Sbjct: 1   GDLFRMYERFASEKGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQRVP 60

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P   + I+IEI   D RIDT R+SGAGGQHVNTTDSAVRITH
Sbjct: 61  ETEAGGRIHTSAATVAVLP-EAEEIDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVRITH 119

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQ 311
           +P+G+VV    E+SQH+N+A+A  +LR++LY+ E Q+    +      K+++G G    +
Sbjct: 120 LPSGIVVTSS-EKSQHQNRAKAMQVLRSRLYDAERQR--ADSERSADRKSQVGSGDRSER 176

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IR+Y   P   V D R N+       +++G++++ + A +A
Sbjct: 177 IRTYNF-PQGRVTDHRINLTLYKLDRMMEGEIEEVVDALMA 216


>gi|326914097|ref|XP_003203364.1| PREDICTED: peptide chain release factor 1, mitochondrial-like
           [Meleagris gallopavo]
          Length = 455

 Score =  161 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 100/352 (28%), Positives = 156/352 (44%), Gaps = 21/352 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +    +N+        +N  E + L R    L    +  +EI++   +   L  +
Sbjct: 86  LETLSKEYQQVNSLLNADS--KNEFEQRTLRRRSADLSPVATAFQEIKEAEGELRELETM 143

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-------LSGEADSNDAYLEVHAG--AG 126
             E       Q     L+  +   +                 + D +   LEV AG   G
Sbjct: 144 CRELGSREEKQLLELALEEKETLNKKINTLCRKLFQLLVPKEKYDKSHVILEVTAGRTTG 203

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G   Q +   +  MY  +A+ + +  + L     E  G+  A   I G + Y  LK E G
Sbjct: 204 GDICQQFTKEMFEMYQNYADYKCWTFDILNYVPAEIGGLHHAAAHISGDDVYRHLKYEGG 263

Query: 187 VHRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            HR+ RI     +SR     + +   +     + +++++   D RIDT+RA GAGGQHVN
Sbjct: 264 THRVQRIPETGLSSRMQRIHTGTMSVIVLPQPEEVDVKVDPKDLRIDTFRAKGAGGQHVN 323

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            TDSAVRI H+PTGVVV+CQQERSQ  NK  A   LRAKLY+  ++K+        + K 
Sbjct: 324 KTDSAVRIVHLPTGVVVECQQERSQQMNKEIALRTLRAKLYQQIIEKQLSQEQ--SARKL 381

Query: 305 EIGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351
           ++G      +IR+Y       V D R + +  +  ++L G  +LD  +   L
Sbjct: 382 QLGTRAQSERIRTYNF-TQDRVTDHRISYDARNIKEILSGKEELDKLINRLL 432


>gi|289678406|ref|ZP_06499296.1| peptide chain release factor 1 [Pseudomonas syringae pv. syringae
           FF5]
          Length = 219

 Score =  161 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 91/213 (42%), Positives = 127/213 (59%), Gaps = 6/213 (2%)

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E+R  + E L  ++GE  G K     ++G + YG LK E G HR+ R+   +S  R HTS
Sbjct: 1   ERRGGRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQRVPETESQGRIHTS 60

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
             ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TDSA+RITH+P+G+VV+CQ+
Sbjct: 61  ACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTDSAIRITHLPSGIVVECQE 120

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQM 322
           ERSQHKN+A+A + L AKL +   Q       I    K  +G G    +IR+Y   P   
Sbjct: 121 ERSQHKNRARAMSWLSAKLND--QQTSAAANAIASERKLLVGSGDRSERIRTYNF-PQGR 177

Query: 323 VKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           V D R N+   S  +VL G +D  ++  LA  +
Sbjct: 178 VTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQ 210


>gi|295099339|emb|CBK88428.1| bacterial peptide chain release factor 1 (bRF-1) [Eubacterium
           cylindroides T2-87]
          Length = 316

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 100/299 (33%), Positives = 150/299 (50%), Gaps = 6/299 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D+ V+R + +N       +  +  +   L RE+  L   +    E +    +      L
Sbjct: 8   LDSLVERYNEINELMMSSSVVSDRKQMAKLGREQNELTPIVETYAEYKQAKEEFEEAKTL 67

Query: 76  ALEEDDCSI---LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             E+D         E       IK  ++  +   +     DS++A++E+   AGG E+  
Sbjct: 68  QKEDDKELRELANAEIERLEPAIKEYLDRLELLLVPKDPNDSHNAFMEIRGAAGGDEANI 127

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY ++AE + +K E  +  D E  G    T  + G NAYG LK E G HR+ R
Sbjct: 128 FAGDLFRMYAKYAESKGWKVEVTDSEDSEAGGFSLITFKVTGQNAYGTLKFESGSHRVQR 187

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R  TS +++  YP   D  + +I  +D  I+  RASGAGGQHVN TDSAVRI
Sbjct: 188 VPKTESQGRIQTSTATVLCYP-ELDEEDFDIDMNDLEIEAMRASGAGGQHVNKTDSAVRI 246

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
            H PTG+VV+CQ  RSQH+N+A A   + A++   E  +RE     G   +T+IG G +
Sbjct: 247 VHKPTGIVVKCQDGRSQHENRATALATIAARV--KEEHQRELDEKAGAERRTKIGTGDR 303


>gi|325973695|ref|YP_004250759.1| peptide chain release factor 1 [Mycoplasma suis str. Illinois]
 gi|325990139|ref|YP_004249838.1| peptide chain release factor 1 [Mycoplasma suis KI3806]
 gi|323575224|emb|CBZ40889.1| Peptide chain release factor 1 [Mycoplasma suis]
 gi|323652297|gb|ADX98379.1| peptide chain release factor 1 [Mycoplasma suis str. Illinois]
          Length = 359

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 101/334 (30%), Positives = 164/334 (49%), Gaps = 17/334 (5%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
            Q++        D    +N+     L +E       I      +  + D     E   + 
Sbjct: 17  KQKILE-EKLLSDSANIKNIA----LQKEISKNRELIEKFSSYKKYISDYEECKESISKG 71

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQDWAN 135
            D        +  + ++ ++E  + E       S + D  +  +E+H+ AGG E+  + +
Sbjct: 72  KDAEFKSLLEEECRLLEKKIEQLEQELKSDLFPSNKYDGKNIVIEMHSAAGGEEAAIFVS 131

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            L   Y ++A + K+K   +++ + E  G+   T  + G   Y  +K E GVHR+ R+  
Sbjct: 132 NLFDSYKKYANENKWKLNVVDLRESER-GLAFITFTLSGSKVYSKMKYESGVHRVQRVPE 190

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
            +S  R HTS  ++ V P   D IEI++  SD RID YRASGAGGQHVN T+SAVR+ HI
Sbjct: 191 TESKGRVHTSTITVSVLP-EADEIEIQLDPSDIRIDVYRASGAGGQHVNKTESAVRLVHI 249

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---I 312
           PT ++V CQQERSQ  NK  A+ +L+ KL+  E +K+ +      + K +IG G +   I
Sbjct: 250 PTNIMVACQQERSQMLNKEIAFKILKTKLW--EREKKLQKEEFFSNLKQQIGKGERAEKI 307

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
           R+Y   P   + D R  +   + + V++G  +  
Sbjct: 308 RTYNY-PQNRITDHRILLTINNLTSVMEGHFEQI 340


>gi|295698659|ref|YP_003603314.1| peptide chain release factor 1 [Candidatus Riesia pediculicola
           USDA]
 gi|291157243|gb|ADD79688.1| peptide chain release factor 1 [Candidatus Riesia pediculicola
           USDA]
          Length = 346

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 121/343 (35%), Positives = 186/343 (54%), Gaps = 10/343 (2%)

Query: 11  GGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
             +F+ +    ++   +     +     N      L RE   L   IS  K+I+    + 
Sbjct: 3   KSIFEEYQKIKKKFKTIQKNFLNKSSIYNSKSRPSLQREYTKLFKIISNFKKIESIRKEI 62

Query: 70  LILLELALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGT 128
             + +L L+E+  S+  E  + L  +K +VE + + +     + D  D +LE+ AG GG+
Sbjct: 63  EEIKKLILDEELKSLALEELNKLINLKKKVENRLRNQLTPKDQNDRKDCFLEIKAGTGGS 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGV 187
           E+  +A  L RMY ++AE   +K E + I++ E   G K     I G   Y  LK E G 
Sbjct: 123 EAAIFAKDLFRMYCKYAESCSWKVEIISINEIESGSGYKEIIAKISGKEVYRKLKFESGG 182

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ RI   +S  R HTS   + +   VD S    I+++D RIDT+R+SGAGGQHVNTT+
Sbjct: 183 HRVQRIPETESRGRIHTSSCKVAILLKVDASEIK-INQNDIRIDTFRSSGAGGQHVNTTN 241

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SA+R+THIPTG+ V+CQ ERSQHKN+A+A ++L A+L  LEL+K  +  +  +  K   G
Sbjct: 242 SAIRVTHIPTGISVECQDERSQHKNRAKAMSVLLARLKNLELKKVAQEKSYKK--KFLFG 299

Query: 308 WGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFM 347
            G    +IR+Y  Q   +V D RTN      ++V++G L+  +
Sbjct: 300 SGERSDRIRTYNFQRGTIV-DHRTNSVTYQINEVMNGKLEILI 341


>gi|323249834|gb|EGA33733.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
          Length = 281

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 98/272 (36%), Positives = 149/272 (54%), Gaps = 1/272 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE      ++ +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E + + +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESRRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           +PTG+VV+CQ ERSQHKNKA+A ++L A+++ 
Sbjct: 249 LPTGIVVECQDERSQHKNKAKALSVLGARIHA 280


>gi|301617313|ref|XP_002938091.1| PREDICTED: LOW QUALITY PROTEIN: peptide chain release factor 1,
           mitochondrial-like [Xenopus (Silurana) tropicalis]
          Length = 446

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 103/351 (29%), Positives = 158/351 (45%), Gaps = 21/351 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  +    L        + ++   +    R    L   I  +++I++   D   L  +
Sbjct: 79  LQSLSKEHERLTEMLGQTSVREDDRRSA--SRRHSELSRLIGLLRDIKETEQDVRELELM 136

Query: 76  ALEEDDCSILQE-------TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG--AG 126
              ++     Q         +   Q I           L   + D NDA LEV +G   G
Sbjct: 137 CAGKNXLEEGQMLALALEEKNTLKQNINKLRGKLLQALLPHEKYDMNDAVLEVTSGRTTG 196

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G   Q +   +  MY  +A  + +  E L     E  G+  A   I G   Y  LK E G
Sbjct: 197 GDICQQFTKEIFDMYQNYAYYKSWSFEILNYSPAEYGGLHHAAARISGEGVYKRLKYEGG 256

Query: 187 VHRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            HR+ RI     +SR     + +   +     D +E++I   D RIDT+R+ GAGGQHVN
Sbjct: 257 THRVQRIPEVGLSSRMQRIHTGTMTVIVLPQPDEVEVKIDSKDLRIDTFRSKGAGGQHVN 316

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRI HIPTG+ V+CQQERSQ  NK +A  +LR +LYE  +++  E+     + K 
Sbjct: 317 TTDSAVRIVHIPTGIAVECQQERSQIANKEKALRILRMRLYEQTVEQ--ELLERRSARKL 374

Query: 305 EIGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKAT 350
           ++G      +IR+Y       + D R + E  +  + L+G+  LDD ++  
Sbjct: 375 QVGTRAQSERIRTYNF-TQDRLTDHRIHYEVRNIKEFLNGEELLDDLIQKL 424


>gi|327262069|ref|XP_003215848.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           [Anolis carolinensis]
          Length = 394

 Score =  159 bits (403), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 103/294 (35%), Positives = 153/294 (52%), Gaps = 10/294 (3%)

Query: 63  QDRLCDNLILLELALEEDDCSILQETS-DNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ L D   L      ED   + +       + I           + S E D +D  +EV
Sbjct: 83  EEELGDTERLAREDENEDLRKLAETEIVFCQEEIAELKRQIMLHLIPSEETDESDLIMEV 142

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +G GG E+  +   +  MY ++A  + +  + LE    +  G++ A+  I G  AY  +
Sbjct: 143 TSGVGGQEAMLFTAEMFDMYQQYAAYKNWNFDILEYAPSDIGGLRYASAAIAGHEAYRQM 202

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K E GVHR+ R+   +   R HTS  ++ + P   + I + I+  + RI+T RASGAGGQ
Sbjct: 203 KFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQ-PNEINLTINPKELRIETKRASGAGGQ 261

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVRI HIPTGVV +CQQERSQ KNKA+A  +LRAKLY ++L+  +E      +
Sbjct: 262 HVNTTDSAVRILHIPTGVVSECQQERSQIKNKAKAIQILRAKLYNMKLE--DESRKRETA 319

Query: 302 SKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKAT 350
            K +    G   +IR+Y   P   V D R +         + G+  LD+ ++A 
Sbjct: 320 RKIQTGTKGRSEKIRTYNF-PQDRVTDHRISRSVHHIEQFMLGEELLDEMIQAL 372


>gi|224043444|ref|XP_002196330.1| PREDICTED: mitochondrial translational release factor 1
           [Taeniopygia guttata]
          Length = 418

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 96/352 (27%), Positives = 156/352 (44%), Gaps = 21/352 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++  +    ++ +     L  +  + + L R    L    +  +EI++   +   L  +
Sbjct: 50  LESLSKEYQQVSHQLSAHSL-NDFEQ-RTLRRRCADLSPIAAAFQEIKEAEREVQELEAM 107

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESL-------LSGEADSNDAYLEVHAG--AG 126
             E D     Q     L+  +   +                 + D +   LEV AG   G
Sbjct: 108 CTELDSRDEKQLLELALEEKESLDKKMNMLCRKLFQLLVPKEKYDRSSVILEVTAGRTTG 167

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G   Q +   +  MY  +A+ +++  + +     E  G+  A   I G N Y  LK E G
Sbjct: 168 GDICQQFTKEMFDMYQSYADYKRWTFDIVNYTPAEIGGLHHAAAHISGENVYRHLKYEGG 227

Query: 187 VHRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            HR+ RI     +SR     + +   +     + +++++   D RIDT+RA GAG QHVN
Sbjct: 228 THRVQRIPETGMSSRMQRIHTGTMSVIVLPQPEEVDVKVDPKDLRIDTFRAKGAGEQHVN 287

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            TDSAVRI H+PTG+ V+CQQERSQ  NK  A   LRAKLY+  ++K+        + K 
Sbjct: 288 KTDSAVRIVHLPTGLAVECQQERSQQLNKEIALRTLRAKLYQQLVEKQLSQEQ--SARKL 345

Query: 305 EIGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351
           ++G      +IR+Y       V D R + +  +  ++L G   LD  +   L
Sbjct: 346 QLGTRAQSERIRTYNF-TQDRVTDHRISYDARNIKEILSGKEALDKLINRLL 396


>gi|315304796|ref|ZP_07874958.1| peptide chain release factor 1 [Listeria ivanovii FSL F6-596]
 gi|313626836|gb|EFR95807.1| peptide chain release factor 1 [Listeria ivanovii FSL F6-596]
          Length = 229

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 81/222 (36%), Positives = 129/222 (58%), Gaps = 7/222 (3%)

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           + RMY+++AE R +K E ++ +     G K    ++ G +A+  +K E G HR+ R+   
Sbjct: 1   MFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQRVPET 60

Query: 197 DSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +S  R HTS +++ + P   + +EIE+ + D R DT+ ++GAGGQ VNTT SAVR+THIP
Sbjct: 61  ESGGRIHTSTATVAILP-EAEEVEIELHDKDIRTDTFASTGAGGQSVNTTMSAVRLTHIP 119

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIR 313
           TG+VV  Q ERSQ KNK +A  +LRA++Y+    +RE       + K+ +G G    +IR
Sbjct: 120 TGIVVSMQDERSQLKNKDKAMKVLRARVYDKF--EREAREEYDANRKSAVGTGDRSERIR 177

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +Y   P   V D R  +       +++G LD+ + A +   +
Sbjct: 178 TYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQ 218


>gi|66810982|ref|XP_639198.1| peptide chain release factor 1 [Dictyostelium discoideum AX4]
 gi|60467811|gb|EAL65826.1| peptide chain release factor 1 [Dictyostelium discoideum AX4]
          Length = 430

 Score =  159 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 102/348 (29%), Positives = 176/348 (50%), Gaps = 15/348 (4%)

Query: 13  LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +F  +   ++   L     D ++     E K + +E Q     + +  ++ ++L +   L
Sbjct: 76  VFRLNLMGKKSKELRN-MIDSNMGLGQSEIKKISKELQETAEPLGYFGDLIEKLKELKEL 134

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDA-----YLEVHAGAGG 127
             + +EE D    Q    ++ ++K E      + LL      +        LE+ AG GG
Sbjct: 135 QTMLVEETDEDGKQMIKSDINKLKQEEIEPLEKQLLFSLLPGSKDDAGDAILEIRAGTGG 194

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           +E+Q +   +  MY  +  ++ +  E LE+   E  G +  T+ + G   +G+LK E GV
Sbjct: 195 SEAQLFTQDVYEMYRSYCLQKGWTFEPLELSVTEVGGYRDVTVSVSGKGVFGFLKYESGV 254

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HR+ R+   ++  R HTS  ++ + P     ++I+I + D ++D YR+SG GGQ VNTTD
Sbjct: 255 HRVQRVPLTETQGRIHTSTITVAILP-EPKDVDIQIHDRDLKVDIYRSSGNGGQSVNTTD 313

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG 307
           SAVRITH+PTG+ V  Q ERSQH+N+++A  +L+A++YE E  + +           +IG
Sbjct: 314 SAVRITHLPTGITVAMQDERSQHQNRSKAMKILKARIYERERIRLQNER--VSERNAQIG 371

Query: 308 ---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
                 +IR+Y   P   + D R +I   + +  ++ D LD F+   L
Sbjct: 372 SALRSERIRTYNY-PQDRITDHRVSI-NGNLNSCMNSDGLDSFIDEIL 417


>gi|158300562|ref|XP_320450.4| AGAP012078-PA [Anopheles gambiae str. PEST]
 gi|157013219|gb|EAA00316.4| AGAP012078-PA [Anopheles gambiae str. PEST]
          Length = 760

 Score =  159 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 103/303 (33%), Positives = 155/303 (51%), Gaps = 21/303 (6%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES---LLSGEADSNDAY 118
           +Q  L D+          D+   L +         L     +  +    +  E D     
Sbjct: 456 LQRELKDDKD--------DEMVQLLKEEREAYGSILFRLDSEILNGILSMDDEEDYGSLI 507

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +EV AG GG E+  +A  L  MY  + E + ++ E L+  + +  G + AT +I GP+AY
Sbjct: 508 MEVTAGVGGQEAMLFARELFDMYCGYVEYKGWEVEMLQTENTDIGGTRHATTVISGPDAY 567

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
            +LK E GVHR+ RI   + + R HTS  ++ + P  DD  ++E+ E D +I+T RASGA
Sbjct: 568 RYLKHEGGVHRVQRIPATEKSGRIHTSTVTVSIIPRPDDF-QVELKEKDLKIETKRASGA 626

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVNTTDSAVRI H+PTG+ V+CQ ERSQ KN+  A   L AKL ++EL+ R      
Sbjct: 627 GGQHVNTTDSAVRIVHLPTGIAVECQTERSQQKNREIAKQKLTAKLMQIELEARFSSTQA 686

Query: 299 GESSKTEIG---WGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDG--DLDDFMKATLA 352
            +  K+++G      +IR+Y       + D R       +    L+G   LDD ++    
Sbjct: 687 LK--KSQVGQSLRNEKIRTYNFN-QDRITDHRIEGGTAHNLKGFLEGGEQLDDMIEKLRR 743

Query: 353 IKK 355
            ++
Sbjct: 744 SQR 746


>gi|301029486|ref|ZP_07192568.1| putative peptide chain release factor 1 [Escherichia coli MS 196-1]
 gi|299877629|gb|EFI85840.1| putative peptide chain release factor 1 [Escherichia coli MS 196-1]
          Length = 219

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 85/211 (40%), Positives = 128/211 (60%), Gaps = 6/211 (2%)

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           R+++ E +   +GE  G K     I G   YG LK E G HR+ R+   +S  R HTS  
Sbjct: 1   RRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSAC 60

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ER
Sbjct: 61  TVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDER 120

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324
           SQHKNKA+A ++L A+++  E+ KR++      + +  +G G    + R+Y   P   V 
Sbjct: 121 SQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDRNRTYNF-PQGRVT 177

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           D R N+      +V++G LD  ++  +   +
Sbjct: 178 DHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 208


>gi|6321295|ref|NP_011372.1| Mrf1p [Saccharomyces cerevisiae S288c]
 gi|400276|sp|P30775|RF1M_YEAST RecName: Full=Peptide chain release factor 1, mitochondrial;
           Short=MRF-1; Short=MtRF-1; Flags: Precursor
 gi|3972|emb|CAA42932.1| mitochondrial release factor 1 [Saccharomyces cerevisiae]
 gi|1322722|emb|CAA96855.1| MRF1 [Saccharomyces cerevisiae]
 gi|1498241|emb|CAA68219.1| MRF1 [Saccharomyces cerevisiae]
 gi|151943668|gb|EDN61978.1| mitochondrial translation release factor [Saccharomyces cerevisiae
           YJM789]
 gi|190407089|gb|EDV10356.1| mitochondrial polypeptide chain release factor [Saccharomyces
           cerevisiae RM11-1a]
 gi|207345440|gb|EDZ72262.1| YGL143Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256272236|gb|EEU07227.1| Mrf1p [Saccharomyces cerevisiae JAY291]
 gi|259146366|emb|CAY79623.1| Mrf1p [Saccharomyces cerevisiae EC1118]
 gi|285812067|tpg|DAA07967.1| TPA: Mrf1p [Saccharomyces cerevisiae S288c]
 gi|323304985|gb|EGA58739.1| Mrf1p [Saccharomyces cerevisiae FostersB]
          Length = 413

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 106/345 (30%), Positives = 161/345 (46%), Gaps = 18/345 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +     L  L+       +  +V +     +    L        E +++L +   L E+ 
Sbjct: 58  EKYEAELKDLDKDLSC-GIHFDVNK----QKHYAKLSALTDTFIEYKEKLNELKSLQEMI 112

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQF--ESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           + +       E        + E    +   + L         + LE+  G GG E+  + 
Sbjct: 113 VSDPSLRAEAEQEYAELVPQYETTSSRLVNKLLPPHPFADKPSLLELRPGVGGIEAMIFT 172

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
             LL MY  +A  RK+K   +  ++ E   GI  A L I+   +Y  L+ E GVHR+ RI
Sbjct: 173 QNLLDMYIGYANYRKWKYRIISKNENESGSGIIDAILSIEEAGSYDRLRFEAGVHRVQRI 232

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSI-------EIEISESDCRIDTYRASGAGGQHVNTT 246
              ++  R HTS +++ V P + D         E      + R+D  RASG GGQHVNTT
Sbjct: 233 PSTETKGRTHTSTAAVVVLPQIGDESAKSIDAYERTFKPGEIRVDIMRASGKGGQHVNTT 292

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TE 305
           DSAVR+THIP+G+VV  Q ERSQHKNKA+A+ +LRA+L E E  ++EE       S+ + 
Sbjct: 293 DSAVRLTHIPSGIVVSMQDERSQHKNKAKAFTILRARLAEKERLEKEEKERKARKSQVSS 352

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKA 349
                +IR+Y   P   + D R          VL G+ LD+ ++A
Sbjct: 353 TNRSDKIRTYNF-PQNRITDHRCGFTLLDLPGVLSGERLDEVIEA 396


>gi|224048051|ref|XP_002187712.1| PREDICTED: mitochondrial translational release factor 1-like
           [Taeniopygia guttata]
          Length = 421

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 100/259 (38%), Positives = 143/259 (55%), Gaps = 9/259 (3%)

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
              +      + S E D +D  +EV AG GG E+  + + +  MY R+A  +K+K E LE
Sbjct: 145 ELKQQIVLLLIPSEETDESDLVMEVTAGVGGQEAMLFTSEIFDMYQRYAAYKKWKFEVLE 204

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
               E  G++ A   I G  AY ++K E GVHR+ R+   +   R HTS  ++ + P   
Sbjct: 205 YFPSELGGLRHAVASIAGLEAYKYMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPT 264

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           +   ++I+  D RI+T RASGAGGQHVNTTDSAVRI HIPTG+V +CQQERSQ +NK +A
Sbjct: 265 EM-RLQINPKDLRIETKRASGAGGQHVNTTDSAVRIVHIPTGIVSECQQERSQIRNKEKA 323

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKT 333
             ML AKLY  +L+  EE      + K +I   G   +IR+Y   P   + D R +    
Sbjct: 324 MQMLCAKLYNAKLE--EETKKRNYARKIQIGTKGRSEKIRTYNF-PQDRITDHRISRSVH 380

Query: 334 SPSDVLDGD--LDDFMKAT 350
                + G+  LD+ ++  
Sbjct: 381 HVESFMLGEEMLDEMIQTL 399


>gi|156844661|ref|XP_001645392.1| hypothetical protein Kpol_534p13 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156116054|gb|EDO17534.1| hypothetical protein Kpol_534p13 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 404

 Score =  158 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 100/346 (28%), Positives = 157/346 (45%), Gaps = 22/346 (6%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           ++    L  L     D + +          ++            E + +L D   L E+ 
Sbjct: 47  ESYCDELDKLKKDMFDGNAFD-----VEQQKKYARFSTIADAFHEYKSQLDDYKGLNEMI 101

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTESQDWA 134
             +                 L          L    +       +E+  G GG E+  +A
Sbjct: 102 KSDPALKDEASQELEQLIPLLNRSSSVLLDKLLPPHEFADKPCIIELRPGVGGIEAMIFA 161

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
             LL MY  +A  +K+K E +  ++ E   GI  A L I  P AY  ++ E GVHR+ R+
Sbjct: 162 QDLLNMYIGYATSKKWKHEIISRNENESGSGIVDAILSINEPGAYDRMRLEVGVHRVQRV 221

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIE-------ISESDCRIDTYRASGAGGQHVNTT 246
              ++  R HTS +++ V P + +  E E           + RID  RA G GGQHVNTT
Sbjct: 222 PATETKGRTHTSTAAVVVLPQLGNGSEREAEAYERTFKPDEIRIDVMRARGKGGQHVNTT 281

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           DSAVR+TH P+G+V+  Q ERSQHKNKA+A+ +L++KL E+E    E+      + K ++
Sbjct: 282 DSAVRLTHFPSGIVISMQDERSQHKNKAKAFAILKSKLAEIER--LEKEEKERSARKEQV 339

Query: 307 G---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMK 348
                  +IR+Y   P   + D R  +   + ++V+ G+ LD+ M 
Sbjct: 340 STTDRSDKIRTYNY-PQNRITDHRCGLTLYALNEVITGERLDEVMD 384


>gi|329913866|ref|ZP_08275999.1| peptide chain release factor RF-2 [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327545272|gb|EGF30526.1| peptide chain release factor RF-2 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 164

 Score =  158 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 99/162 (61%), Positives = 128/162 (79%), Gaps = 1/162 (0%)

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+DS + RHTSFSS++VYP VDDS+EI+I+ +D R+DTYRASGAGGQH+N TDSAVR
Sbjct: 2   RKSPFDSANGRHTSFSSLFVYPEVDDSLEIDINPADVRVDTYRASGAGGQHINKTDSAVR 61

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +TH PTG+VVQCQ +RSQH+N+A+AW ML+++LYE E++KR       E SKT+IGWG Q
Sbjct: 62  LTHGPTGIVVQCQNDRSQHRNRAEAWAMLKSRLYEHEMRKRMSDQQKLEDSKTDIGWGHQ 121

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           IRSYVL     +KDLRT+ E  +   VLDGD+D+F+ A+L  
Sbjct: 122 IRSYVLD-QSRIKDLRTSFETGNTKAVLDGDIDEFIAASLKQ 162


>gi|289812362|ref|ZP_06542991.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 288

 Score =  158 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 94/259 (36%), Positives = 139/259 (53%), Gaps = 1/259 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +      + Q    D      +
Sbjct: 30  LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 89

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE      ++ +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 90  LDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 149

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E + + +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 150 GDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 209

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 210 ATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 269

Query: 255 IPTGVVVQCQQERSQHKNK 273
           +PTG+VV+CQ ERSQHKNK
Sbjct: 270 LPTGIVVECQDERSQHKNK 288


>gi|302759765|ref|XP_002963305.1| hypothetical protein SELMODRAFT_405087 [Selaginella moellendorffii]
 gi|300168573|gb|EFJ35176.1| hypothetical protein SELMODRAFT_405087 [Selaginella moellendorffii]
          Length = 927

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 104/330 (31%), Positives = 174/330 (52%), Gaps = 18/330 (5%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLILLE 74
           +   R + L+    +P +  +  E   + +E + LD ++  IK ++ +  +      L++
Sbjct: 26  SIEDRHACLSKALLEPGIASD--ELIKMNKELRKLDYSVDMIKALRAKEKEVIGLKELVK 83

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
            ++E+++   L          ++          L  + +++        GAGG E+  +A
Sbjct: 84  ESVEDEEMRRLASGELQTATREVRDAQHDVLLELIPKDEADSR------GAGGDEASIFA 137

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           + L +MY ++     ++ E L I   +  G K A+ +I G   YG LK E GVHR+ R+ 
Sbjct: 138 SDLFKMYEKYTANNSWRFEVLSITTTDTRGYKEASAVISGDGVYGALKFESGVHRVQRVP 197

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +   R HTS +S+ + P   + +++EI   + +IDTYRA GAGGQHVNTT SAVR+TH
Sbjct: 198 VTEKAGRIHTSTASVAILP-EANEVDVEIRNDEIKIDTYRAGGAGGQHVNTTCSAVRVTH 256

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WGRQ 311
            PTG+VV  Q ERSQHKNKA+A ++L A+LYELE  +    A+  E  + +IG      +
Sbjct: 257 APTGIVVAIQDERSQHKNKAKALSILYARLYELERSR--AAASRSELRQDQIGSSDRSER 314

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           IR+Y   P   V D +  + + +   +++G
Sbjct: 315 IRTYNF-PQGRVTDHQVGVTQHAIEQIMEG 343


>gi|325278151|ref|ZP_08143660.1| peptide chain release factor 2 [Pseudomonas sp. TJI-51]
 gi|324096726|gb|EGB95063.1| peptide chain release factor 2 [Pseudomonas sp. TJI-51]
          Length = 157

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 99/156 (63%), Positives = 120/156 (76%), Gaps = 1/156 (0%)

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S +RRHTSFS+++V P +DD +EIEI+ SD RIDTYR+SGAGGQHVNTTDSAVRITH+PT
Sbjct: 1   SGARRHTSFSAVFVSPEIDDKVEIEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITHVPT 60

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
             VV CQ ERSQH NK  A  MLRAKLYELE+QKR   +   E SK++IGWG QIRSYVL
Sbjct: 61  NTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDSKSDIGWGHQIRSYVL 120

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
                +KDLRT +E++    VLDGDLD +++A+L  
Sbjct: 121 DD-SRIKDLRTGVERSDCQKVLDGDLDQYLEASLKQ 155


>gi|114052118|ref|NP_001040455.1| mitochondrial translational release factor 1 [Bombyx mori]
 gi|95102962|gb|ABF51422.1| mitochondrial translational release factor 1 [Bombyx mori]
          Length = 401

 Score =  156 bits (395), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 100/333 (30%), Positives = 159/333 (47%), Gaps = 14/333 (4%)

Query: 33  PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN- 91
            +L   + ++    R  Q +   ++ +++          L EL  +E D S +++     
Sbjct: 50  ENLLSKMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDSEIKKMIKEE 109

Query: 92  ---LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKR 148
                +   E++      LL          LE+ AGAGG E+  +A  L  MY  +A  +
Sbjct: 110 AAIYLKRLKEIDDDLQLILLEPPLTEGGVLLELTAGAGGQEAMLFAKELFNMYQSYAINK 169

Query: 149 KFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSS 208
            ++ +       E  G++  ++LI+G      ++ E GVHR+ RI   +   R HTS  +
Sbjct: 170 GWEVDIASFDLTEIGGVRKGSMLIQGFGVPELMRMEAGVHRVQRIPATEKGGRIHTSTVT 229

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + + P     IE+ I E D  I+T RASGAGGQHVNTTDSAVR+ H PTG  V+CQ+ RS
Sbjct: 230 VAILPQ-PSEIELNIPERDVVIETKRASGAGGQHVNTTDSAVRLIHTPTGTTVECQEGRS 288

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKD 325
           Q KNK  A   LR  L  LE Q +E+   +    K+++G G +   IR+Y   P   V +
Sbjct: 289 QIKNKQIAMQKLRTLL--LEKQIQEQALKLQSERKSQVGSGNRNEKIRTYNF-PQDRVTE 345

Query: 326 LR-TNIEKTSPSDVLDG--DLDDFMKATLAIKK 355
            R       +    ++G   L+   ++ L  ++
Sbjct: 346 HRDGGGTFHNLKGFMEGGEQLEQLQESLLKKER 378


>gi|312220543|emb|CBY00484.1| similar to peptide chain release factor 1 [Leptosphaeria maculans]
          Length = 418

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 103/355 (29%), Positives = 166/355 (46%), Gaps = 28/355 (7%)

Query: 22  RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDD 81
               L  K  D     +   AK L  E   + NA+    +  + + +   L+  +  + +
Sbjct: 52  EHKQLAAKLND-GF--DTRIAKKLG-EYSPIVNALGKWDKANESVTELTSLIHDSTTDPE 107

Query: 82  CSILQETSDNLQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
              L        R +L    +   +  +           LE+  GAGG+E+  +A  L R
Sbjct: 108 LRELAADDLIETREQLSAASQSLITALVPVHPFAHLPCLLELRPGAGGSEAAIFAGDLFR 167

Query: 140 MYTRWAEKRKFKTE---ALEIHDGEEAGI--KSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           MY  +  +  F+T       I+   EAG+    A L ++  NAYG  + E GVHR+ R+ 
Sbjct: 168 MYLAFCNRNGFRTNLLKYENINGTSEAGVPLSEAVLEVENDNAYGVFRCEAGVHRVQRVP 227

Query: 195 PYDSNSRRHTSFSSIWVYP-----------VVDDSIEIEISESDCRIDTYRASGAGGQHV 243
             ++  R HTS  S+ V P             D   +  I   + +++  RASGAGGQHV
Sbjct: 228 ATETKGRTHTSAVSVHVLPSLQENNSSEENFDDPDSDYYIDVKEVKVEVMRASGAGGQHV 287

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS- 302
           N T+SAVR+TH+PT  VV  Q  RSQHKNK +AW +LR+++ +   ++REE  +    S 
Sbjct: 288 NKTESAVRLTHLPTNTVVAMQDSRSQHKNKEKAWALLRSRIAQSRREQREEEISNMRRSV 347

Query: 303 --KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
               ++G G ++R+Y     Q V D R+ +      DV++G  +L+  M++  + 
Sbjct: 348 IGVAKMGRGDKVRTYNWG-QQRVTDHRSGLTVHDLDDVMEGGQNLEKVMESVRSW 401


>gi|159462370|ref|XP_001689415.1| peptide chain release factor [Chlamydomonas reinhardtii]
 gi|158283403|gb|EDP09153.1| peptide chain release factor [Chlamydomonas reinhardtii]
          Length = 263

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 99/256 (38%), Positives = 145/256 (56%), Gaps = 9/256 (3%)

Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
            +   LL G  D   A L + AGAGG ++ DWA ML RMY RWAE   ++   L+   G+
Sbjct: 1   WELRRLLCGPYDDRGARLTISAGAGGVDAMDWAEMLERMYMRWAEAGGYQVAVLDRAAGD 60

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
           EAGI          +AYG+L+ E+G HRLVR SP+++   R TSF+ + V PV+      
Sbjct: 61  EAGITGG------RHAYGYLRCEKGTHRLVRNSPFNAKGLRQTSFAGVDVMPVLGPDDLP 114

Query: 222 --EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
             +++E D  I T R+ G GGQ+VN  ++ VRI H+PTG+ V+C QERSQ +NKA A ++
Sbjct: 115 ELDLNEKDLEITTMRSGGKGGQNVNKVETGVRILHVPTGLAVKCTQERSQAQNKAIALDL 174

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGW-GRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           L+A+L     +   E A     +  +      +++  +  PY++VKD RT  E +    V
Sbjct: 175 LKARLLANSREPPMEEAGSRMGAVADCNTHAHRVQGCLFHPYKLVKDTRTGTETSDVQAV 234

Query: 339 LDGDLDDFMKATLAIK 354
           +DG+L  FM A L  +
Sbjct: 235 MDGELGGFMAAVLRQR 250


>gi|218514632|ref|ZP_03511472.1| peptide chain release factor 1 [Rhizobium etli 8C-3]
          Length = 236

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 83/208 (39%), Positives = 125/208 (60%), Gaps = 8/208 (3%)

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           + +K E L   +GE  G K     I G   +  LK E GVHR+ R+   ++  R HTS +
Sbjct: 20  KGWKVEVLSASEGEAGGYKEIIATITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSAA 79

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           ++ V P   + I+IEI   D RIDT R+SGAGGQHVNTTDSAVRITH+P+G+VV    E+
Sbjct: 80  TVAVLP-EAEEIDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAVRITHLPSGIVVTSS-EK 137

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVK 324
           SQH+N+A+A  +LR++LY+ E Q+    +      K+++G G    +IR+Y   P   V 
Sbjct: 138 SQHQNRAKAMQVLRSRLYDAERQR--ADSERSADRKSQVGSGDRSERIRTYNF-PQGRVT 194

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           D R N+       +++G++++ + A +A
Sbjct: 195 DHRINLTLYKLDRMMEGEIEEVVDALMA 222


>gi|46117472|ref|XP_384754.1| hypothetical protein FG04578.1 [Gibberella zeae PH-1]
          Length = 445

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 92/360 (25%), Positives = 165/360 (45%), Gaps = 33/360 (9%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
            +       L           +   AK +  E   +  A+  +++ Q  + +   +L+ A
Sbjct: 61  QSLTTEHDALQKNLNS-SF--DSTTAKRVG-ELSRVAEALKALEKSQTSVKELKQMLDDA 116

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN--DAYLEVHAGAGGTESQDWA 134
             + D + +     + +  +LE   ++  + L+           LE   G GG E + + 
Sbjct: 117 SLDQDLAAIARDELSSETGQLEALARKLSASLTPRHPFADFPCMLEFRPGPGGLEGRFFM 176

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAG----------IKSATLLIKGPNAYGWLKGE 184
           + L +MY     +R ++   ++    + AG          ++ A L +    A+   +GE
Sbjct: 177 DTLFKMYKGLCMRRGYRHTVVKYEFADGAGDSSSSAGENPLQEAILEVHDQGAFDIFRGE 236

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYP-----------VVDDSIEIEISESDCRIDTY 233
            G+HR+ RI   ++  R HTS  ++WV P             D   +  ++  + +I+T 
Sbjct: 237 AGMHRVQRIPSTETKGRVHTSAVAVWVLPSFPENSATSIDFEDPESDFYVNPQELKIETM 296

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           RA GAGGQHVN T+SA+R+TH+PTG  V  Q  RSQ +N+ +AW ++R+++ +   ++RE
Sbjct: 297 RARGAGGQHVNKTESAIRMTHLPTGTTVSMQDHRSQQRNREEAWKLMRSRIADQRREQRE 356

Query: 294 EIANIGES---SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMK 348
           + A+   +   SKT+I  G +IR+Y         D R  I+     +VL+G   LD  M 
Sbjct: 357 QEASQLRNSVLSKTQITRGDKIRTYNYN-QDRCTDHRAGIDVHGLPNVLEGGEKLDKIMD 415


>gi|66805655|ref|XP_636549.1| class I peptide chain release factor [Dictyostelium discoideum AX4]
 gi|60464924|gb|EAL63039.1| class I peptide chain release factor [Dictyostelium discoideum AX4]
          Length = 424

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 125/342 (36%), Positives = 193/342 (56%), Gaps = 8/342 (2%)

Query: 18  NAVQRLSFLNT-KTEDPHLWQNVIEAKML--MRERQHLDNAISFIKEIQDRLCDNLILLE 74
              +R   +   +  +  +  +      +  ++       +I  +  +     D L ++E
Sbjct: 83  AIFKRFEEMKLPEMIESGIGIDASNMDTINQIKNYNQTKQSIEELNLLSKEFNDYLEVVE 142

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           ++    D   L+ET   + ++       + ++L++G+ DS    LE+ AGAGG +S DW 
Sbjct: 143 MSKNIGDNDWLKETRSLINQLFSNCSELEVKALMNGKDDSKGCLLEIQAGAGGNDSMDWT 202

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
            +L  MY +W  ++ +  E ++  DGE  G + A+L I G NAYGWL+ E G+HRL+RIS
Sbjct: 203 KILFEMYCKWGARKGYNVEIIDTADGEF-GYRHASLKIDGHNAYGWLRTEMGIHRLIRIS 261

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+ S+ +RHTSF+S+ VYP+ DDSI+I I   D   +T R+SGAGGQHVN T+SAVRI H
Sbjct: 262 PFSSSGKRHTSFASVVVYPISDDSIKINIDPKDLHFETLRSSGAGGQHVNKTESAVRIVH 321

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG--RQI 312
           IPTG+ V    ERSQH+NK+    +L++KLY  EL+K+ E          +  W     +
Sbjct: 322 IPTGISVLSSSERSQHQNKSNGLLLLKSKLYSHELKKKIEAEKSFRDELGKNSWASDSVV 381

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLA 352
           R+Y + P + VKD RT IE    S +LDG  +LD+ +K  L+
Sbjct: 382 RNYSMHPQERVKDQRTGIEVLQISKILDGEEELDNMIKKALS 423


>gi|116198067|ref|XP_001224845.1| hypothetical protein CHGG_07189 [Chaetomium globosum CBS 148.51]
 gi|88178468|gb|EAQ85936.1| hypothetical protein CHGG_07189 [Chaetomium globosum CBS 148.51]
          Length = 400

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 95/363 (26%), Positives = 156/363 (42%), Gaps = 32/363 (8%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
                   L+   E+     +  +AK    E   + +A+  +++ +  L +   LLE   
Sbjct: 17  KLAIEHDQLSAALEN-DF--DAKKAKRAG-ELSRVASAVKELEKAKAALVELQGLLESND 72

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
            E       +      ++                       LE+  G GG E + +A+ L
Sbjct: 73  AEMRELARDDLEATNAQLAESSHNLSVALTPKHPFADMPCLLEIRPGPGGLEGRFFADSL 132

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGI---------KSATLLIKGPNAYGWLKGEQGVH 188
            +MY  +   + ++T  ++    +  G          + A L ++   AYG  +GE G+H
Sbjct: 133 FQMYKAYCSNKGYRTRIVQYEASDSDGSTGSEGEIPLQEAVLEVQEEGAYGLFRGEAGMH 192

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYP-------------VVDDSIEIEISESDCRIDTYRA 235
           R+ R+   + + R HTS  ++WV P                   +  I  ++ R +T RA
Sbjct: 193 RVQRVPATEKSGRTHTSAVAVWVLPSFPENGTSDSEADWDKPESDFYIDPNEVRSETMRA 252

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
            GAGGQHVN T+SA+R+THIPTG  V  Q  RSQ +N+  AW +LR++L +   + REE 
Sbjct: 253 GGAGGQHVNKTESAIRLTHIPTGTTVSMQDSRSQQRNREDAWRLLRSRLAQQRREAREEQ 312

Query: 296 ANIGESSK---TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKAT 350
           A    SS    ++I  G +IR+Y  Q      D R+ +   +  DVL G   L+  M + 
Sbjct: 313 ARQLRSSVLANSQITRGDKIRTYQYQ-QDRCTDHRSGLNTHNLPDVLRGGETLEKVMDSV 371

Query: 351 LAI 353
              
Sbjct: 372 QNW 374


>gi|14042548|dbj|BAB55295.1| unnamed protein product [Homo sapiens]
          Length = 238

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 93/225 (41%), Positives = 126/225 (56%), Gaps = 9/225 (4%)

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             + + +  MY ++A  +++  E LE    E  G++ A+  I G  AY  +K E GVHR+
Sbjct: 1   MLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASASIGGSEAYRHMKFEGGVHRV 60

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +   R HTS  ++ + P     I + I+  D RIDT RASGAGGQHVNTTDSAV
Sbjct: 61  QRVPKTEKQGRVHTSTMTVAILPQ-PTEINLVINPKDLRIDTKRASGAGGQHVNTTDSAV 119

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307
           RI H+PTGVV +CQQERSQ KNK  A   LRAKLY + L+  EEI     + K +I   G
Sbjct: 120 RIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLE--EEINKRQNARKIQIGSKG 177

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKAT 350
              +IR+Y   P   V D R N         + GD  LD+ +++ 
Sbjct: 178 RSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLLDELVQSL 221


>gi|114609867|ref|XP_001140527.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
 gi|114609869|ref|XP_001140612.1| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes]
          Length = 238

 Score =  156 bits (393), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 92/225 (40%), Positives = 125/225 (55%), Gaps = 9/225 (4%)

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             + + +  MY ++A  +++  E LE    E  G++ A+  I G  AY  +K E GVHR+
Sbjct: 1   MLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASASIGGSEAYRHMKFEGGVHRV 60

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +   R HTS  ++ + P     I + I+  D RIDT RASGAGGQHVNTTDSAV
Sbjct: 61  QRVPKTEKQGRVHTSTMTVAILPQ-PTEINLVINPKDLRIDTKRASGAGGQHVNTTDSAV 119

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307
           RI H+PTGVV +CQQERSQ KNK  A   LRAKLY + L+  EE      + K +I   G
Sbjct: 120 RIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLE--EETNKRQNARKIQIGSKG 177

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKAT 350
              +IR+Y   P   V D R N         + GD  LD+ +++ 
Sbjct: 178 RSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLLDELVQSL 221


>gi|327267784|ref|XP_003218679.1| PREDICTED: peptide chain release factor 1, mitochondrial-like
           [Anolis carolinensis]
          Length = 443

 Score =  155 bits (392), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 100/354 (28%), Positives = 154/354 (43%), Gaps = 21/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
             +  Q    +     D +        + L +    L       KEIQ+   +   L  L
Sbjct: 74  LQDVSQEHQSIGQLLND-NSISEYKR-RDLSKRHAELFPLAVSFKEIQEAKKEMQDLEAL 131

Query: 76  ALEEDDCSILQETSDN-------LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG--AG 126
             + +                   Q+I+   +      +   + D  D  LEV +G   G
Sbjct: 132 CAKLNSSEEKALLELAIEEKGVIDQKIRELYQKLFQILIPRDKYDECDVLLEVTSGRTTG 191

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G   Q +   +  MY  +A+ + +  E  +    E  G+  A   I G + Y  LK E G
Sbjct: 192 GDICQQFTKEVFDMYQNYADYKCWTFEIRKYTPSEYGGLHHAAAYISGDDVYRHLKYEGG 251

Query: 187 VHRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           +HR+ RI     +SR     + +   +     + I I++   D RIDT+RA GAGGQHVN
Sbjct: 252 IHRVQRIPETGLSSRMQRIHTGTMSVIVLPQLEEINIKVDPKDLRIDTFRAKGAGGQHVN 311

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVRI HIPTG+ V+CQQERSQ  N+ +A   L+ KLY+  +++  E++    + K 
Sbjct: 312 TTDSAVRIVHIPTGITVECQQERSQQVNREKAMQALKDKLYQQAIER--ELSQKQSARKM 369

Query: 305 EIGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATLAI 353
           ++G      +IR+Y       V D R + E      +L G   LD+ +   L  
Sbjct: 370 QLGTRSQSERIRTYNFN-QDRVSDHRISYEVRDIKGILSGKGVLDELINKLLEA 422


>gi|68486252|ref|XP_712983.1| hypothetical protein CaO19.8883 [Candida albicans SC5314]
 gi|46434408|gb|EAK93818.1| hypothetical protein CaO19.8883 [Candida albicans SC5314]
          Length = 394

 Score =  155 bits (392), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 93/349 (26%), Positives = 152/349 (43%), Gaps = 21/349 (6%)

Query: 17  DNAVQRLSFLNTKTED---PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
               Q    L+ K  D   P L         ++     L+       E+   + D+  L 
Sbjct: 55  QTIQQEHKELSEKLADKYIPDLQMKFDNYTNILSMFGKLETLTQEYIEL-TEITDDPDLY 113

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           + A EE    ++ +        +  V   + +     +  +    +E+  G GG E+  +
Sbjct: 114 KEAQEELKSIVIPQI-------EKLVSELRVKLRPPVKYANKGCIIELRPGVGGNEASLF 166

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
              LL MY  +A +  +K + +         I  A L I    +Y  ++ E GVHR+ RI
Sbjct: 167 TGDLLNMYMNFASEMNWKYKIISEGKNSSGFINEAILSIDTLGSYDIMRHESGVHRVQRI 226

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRIDTYRASGAGGQHVNTT 246
              ++  R HTS +++ V P + +         E   +  + RIDT RA G GGQHVNTT
Sbjct: 227 PETETKGRVHTSTAAVVVLPKLSEGNESSLKDDERVFAPGEVRIDTMRAGGKGGQHVNTT 286

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TE 305
           DSAVR+ HIPTG++V  Q ERSQ  NKA+A+ +LR++L + E ++         + + + 
Sbjct: 287 DSAVRLLHIPTGMIVIQQDERSQPLNKAKAFAILRSRLAQKEQEEEMLKQKKLRTDQVSS 346

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAI 353
                +I++Y  +    V D R N        VL+G  L   +    + 
Sbjct: 347 TDRSDKIKTYNYK-ENRVTDHRINYSMHDLEGVLEGRKLGQLIDVYRSQ 394


>gi|116515195|ref|YP_802824.1| hypothetical protein BCc_269 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|116257049|gb|ABJ90731.1| peptide chain release factor RF-2 [Buchnera aphidicola str. Cc
           (Cinara cedri)]
          Length = 365

 Score =  155 bits (392), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 130/278 (46%), Positives = 191/278 (68%), Gaps = 1/278 (0%)

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
              E+D +IL+E +   + IK ++   +   + + + D N+ YL++ +G+GG ESQDW  
Sbjct: 87  FKLENDINILKEINIQYKAIKNKIYVLESYMMFNHKNDKNNCYLDIQSGSGGLESQDWTK 146

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
           MLL+MY ++  K+KF T+ +    G+  GIKS TL IKG  A+GWL+ E G+HRLVR SP
Sbjct: 147 MLLKMYLKYLYKKKFVTKIISETVGDNGGIKSITLSIKGKFAFGWLRTETGIHRLVRKSP 206

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           +D+  +RHT+FSSI+VYP + ++I+I +   + RID YR+SGAGGQHVN T+SAVRITH+
Sbjct: 207 FDAGKKRHTTFSSIFVYPALTNNIDINLQSKNLRIDVYRSSGAGGQHVNRTESAVRITHL 266

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315
           PTG+V QCQ  RSQHKNK  A   L+AKLYE+E++K++         K+ I  G QIRSY
Sbjct: 267 PTGIVTQCQNSRSQHKNKNTAIKQLKAKLYEIEIKKKKIEKKKINKKKSNIRSGNQIRSY 326

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +L     +KD+RT +E+   ++VL+GD+ +F+K +L +
Sbjct: 327 ILDD-SRIKDMRTKLERKDINNVLNGDIHEFIKKSLKM 363


>gi|68486191|ref|XP_709944.1| hypothetical protein CaO19.1303 [Candida albicans SC5314]
 gi|46434441|gb|EAK93850.1| hypothetical protein CaO19.1303 [Candida albicans SC5314]
 gi|238881487|gb|EEQ45125.1| peptide chain release factor 1, mitochondrial precursor [Candida
           albicans WO-1]
          Length = 394

 Score =  155 bits (392), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 91/348 (26%), Positives = 155/348 (44%), Gaps = 19/348 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
               Q    L+ K  D ++    ++         +  N +S   +++    + + L E+ 
Sbjct: 55  QTIQQEHKELSEKLADKYIPDLQVKF-------DNYTNILSMFDKLETLTQEYIELTEIT 107

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQF--ESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
            + D     QE   ++   ++E    +   +     +       +E+  G GG E+  + 
Sbjct: 108 DDPDLYKEAQEELKSIVIPQIEKLVSELRVKLRPPVKYADKGCIIELRPGVGGNEASLFT 167

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LL MY  +A +  +K + +         I  A L I    +Y  ++ E GVHR+ RI 
Sbjct: 168 GDLLNMYMNFASEMNWKYKIISEGKNSSGFINEAILSIDTLGSYDIMRHESGVHRVQRIP 227

Query: 195 PYDSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRIDTYRASGAGGQHVNTTD 247
             ++  R HTS +++ V P + +         E   +  + RIDT RA G GGQHVNTTD
Sbjct: 228 ETETKGRVHTSTAAVVVLPKLSEGNESSLKDDERVFAPGEVRIDTMRAGGKGGQHVNTTD 287

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEI 306
           SAVR+ HIPTG++V  Q ERSQ  NKA+A+ +LR++L + E ++         + + +  
Sbjct: 288 SAVRLLHIPTGMIVIQQDERSQPLNKAKAFAILRSRLAQKEQEEEMLKQKKLRTDQVSST 347

Query: 307 GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKATLAI 353
               +I++Y  +    V D R N        VL+G  L   +    + 
Sbjct: 348 DRSDKIKTYNYK-ENRVTDHRINYSMHDLEGVLEGRKLGQLIDVYRSQ 394


>gi|226329845|ref|ZP_03805363.1| hypothetical protein PROPEN_03757 [Proteus penneri ATCC 35198]
 gi|225200640|gb|EEG82994.1| hypothetical protein PROPEN_03757 [Proteus penneri ATCC 35198]
          Length = 274

 Score =  155 bits (392), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 91/260 (35%), Positives = 135/260 (51%), Gaps = 1/260 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     +  +  +    + L +E   L +  +   + +    D      +
Sbjct: 9   LEALQERYEEIQALLSEADVIASQERFRALSKEYSQLTDVTACFSQWRKVQDDIEAAEMM 68

Query: 76  ALEEDDCSILQETSDNLQR-IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE     Q       +  Q   L     D  + +LE+ AG GG E+  +A
Sbjct: 69  LDDPEMKEMAQEELKEAQALNDDLEQQLQVLLLPKDPDDEFNCFLEIRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +  ++GE  G K     + G  AYG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAESRRWRIEVMNANEGEHGGYKEVIAKVVGDGAYGVLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V   V ++   +IS SD RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ETESQGRIHTSACTVAVLAEVPEAELPDISPSDLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKA 274
           IPTG+VV+CQ ERSQHK   
Sbjct: 249 IPTGIVVECQDERSQHKKTK 268


>gi|226493092|ref|NP_001141218.1| hypothetical protein LOC100273305 [Zea mays]
 gi|194703328|gb|ACF85748.1| unknown [Zea mays]
          Length = 407

 Score =  155 bits (392), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 93/360 (25%), Positives = 163/360 (45%), Gaps = 33/360 (9%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
            +       L     +     +   AK +  E   +  A+   +  Q  + +   +L+  
Sbjct: 25  QSLTSEHDDLQKTLNN-SF--DSSIAKRVG-ELSRVAEALKAWQTSQASVAELTSMLDDP 80

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN--DAYLEVHAGAGGTESQDWA 134
            ++ D + +     + +  KLE   ++  + L+           LE   G GG E + + 
Sbjct: 81  DQDADLAAIARDELSSETGKLESLARRLSASLTPRHPFADFPCMLEFRPGPGGLEGRYFM 140

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAG----------IKSATLLIKGPNAYGWLKGE 184
           + L +MY     +R ++   ++    + AG          ++ A L +  P A+   + E
Sbjct: 141 DTLFKMYKALCMRRGYRHTVVKYEFADTAGDSSSSAGENPLQEAILEVHDPGAFDIFRSE 200

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYP-----------VVDDSIEIEISESDCRIDTY 233
            G+HR+ RI   ++  R HTS  ++WV P             D   +  ++  + +I+T 
Sbjct: 201 AGMHRVQRIPSTETKGRVHTSAVAVWVLPSFPENGAANIDFDDPESDFYVNPQEVKIETM 260

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           RA GAGGQHVN T+SA+R+TH+PTG  V  Q  RSQ +N+ +AW +LR+++ +   + RE
Sbjct: 261 RARGAGGQHVNKTESAIRMTHLPTGTTVSMQDHRSQQRNREEAWKLLRSRIADQRREARE 320

Query: 294 EIANIGES---SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMK 348
           E A+   +   SKT+I  G +IR+Y         D R  ++     +VL+G   LD  M 
Sbjct: 321 EEASNLRNSVLSKTQITRGDKIRTYNYN-QDRCTDHRAGVDVHDLPNVLEGGEKLDRIMD 379


>gi|312375908|gb|EFR23156.1| hypothetical protein AND_13424 [Anopheles darlingi]
          Length = 406

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 103/314 (32%), Positives = 158/314 (50%), Gaps = 14/314 (4%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI----KLEVEYKQFESL 107
           L N +   ++ +  + +   L EL  ++DD  I     +         +L+ E  +    
Sbjct: 83  LSNVVEMYEQRKIVVENLGSLKELKDDKDDEMIQLLKEEREAYSNILGRLDREIMEGILS 142

Query: 108 LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167
           +  + +     +EV AG GG E+  +A  L  MY  + E + ++ E L+    +  GI+ 
Sbjct: 143 MDEDEEYGSLIMEVTAGVGGQEAMLFARELFDMYCGYVEHKDWEVEMLQTEGTDLGGIRH 202

Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
           AT++I G + Y  LK E GVHR+ RI   + + R HTS  ++ + P  DD     + E D
Sbjct: 203 ATIIINGTDVYRCLKYEGGVHRVQRIPATEKSGRIHTSTVTVAIIPRPDDFEVD-LKEKD 261

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+CQ ERSQ KN+  A   L AKL + 
Sbjct: 262 LKIETKRASGAGGQHVNTTDSAVRIVHLPTGIAVECQTERSQVKNREIAKQKLVAKLMQQ 321

Query: 288 ELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDG-- 341
           EL+ R       +  K+++G      +IR+Y       + D R       +    L+G  
Sbjct: 322 ELEARFASTQALK--KSQVGQSLRNEKIRTYNFN-QDRITDHRIEGGTVHNLKGFLEGGQ 378

Query: 342 DLDDFMKATLAIKK 355
            LDD +      ++
Sbjct: 379 QLDDMIDKLHRSER 392


>gi|157134367|ref|XP_001663262.1| mitochondrial peptide chain release factor [Aedes aegypti]
 gi|108870516|gb|EAT34741.1| mitochondrial peptide chain release factor [Aedes aegypti]
          Length = 422

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 102/323 (31%), Positives = 167/323 (51%), Gaps = 14/323 (4%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELA-LEEDDCSILQETSDNLQRIKLEVEY 101
           K  ++    L + +   ++ +  + +   L E++  +++D   L           L    
Sbjct: 89  KKDIKRMALLSHVVEMYEQRRIIMDNLNSLQEMSAEKDEDMLQLMREEKEAYTNILRKLD 148

Query: 102 KQFES---LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
            +  +    +  E D N   LEV AG GG E+  ++  L  MY  + + + ++TE +E  
Sbjct: 149 GEIMNGILSMDDEEDYNTLILEVAAGVGGQEAMLFSRELFDMYCGFIDYKGWETEVIETE 208

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           D E  GI+ A++++ G +AY +LK E GVHR+ R+   + ++R HTS +++ V P  D+ 
Sbjct: 209 DTELGGIRHASIVVHGRDAYRYLKFEAGVHRVQRVPTTEKSARIHTSTATVSVIPRPDEF 268

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
               + + D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+CQ ERSQ KNK  A  
Sbjct: 269 EIE-LKDKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGMAVECQTERSQVKNKEIAKQ 327

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTS 334
            L AKL + EL+ +       +  K+++G      +IR+Y       + D R       +
Sbjct: 328 KLLAKLTQQELESKFNATQSMK--KSQVGSSLRNEKIRTYNYN-QDRITDHRVDGGTTHN 384

Query: 335 PSDVLDG--DLDDFMKATLAIKK 355
               L+G   L+D +    A+ +
Sbjct: 385 LKAFLEGGSQLEDMIAKLQAMHR 407


>gi|154310299|ref|XP_001554481.1| hypothetical protein BC1G_07069 [Botryotinia fuckeliana B05.10]
 gi|150851401|gb|EDN26594.1| hypothetical protein BC1G_07069 [Botryotinia fuckeliana B05.10]
          Length = 402

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 93/342 (27%), Positives = 155/342 (45%), Gaps = 33/342 (9%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNL-----QRIKLE 98
            + +    L +    +++ ++       L +L  +      L+E +          ++  
Sbjct: 42  KIAKRIGELQDVAVALRKWEETKESLSELDDLLKDSATDEELRELAVEDLTTTTAHLEEL 101

Query: 99  VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
                               LE+  GAGG E+  +A  LLRMY  +  +++F++  ++  
Sbjct: 102 SRNLTTSLTPKHPFAELPCLLEIRPGAGGGEAAIFAADLLRMYRAYCARKRFRSTIIKYE 161

Query: 159 DGEEAG------IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
             +  G      I    L I+   +Y  L+GE GVHR+ R+   +   R HTS  S+ V 
Sbjct: 162 TTDGEGAGSDAPISEVVLEIESSGSYDSLRGEAGVHRVQRVPATEKQGRTHTSAVSVMVL 221

Query: 213 PVVD----------------DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           P                    + +  ++ +D R D  RA GAGGQHVNTTDSAVR+TH+P
Sbjct: 222 PSFPTTGQEGQEYWEADLNDPNSDYYVNPADVRTDVMRARGAGGQHVNTTDSAVRLTHVP 281

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESS---KTEIGWGRQIR 313
           T  VV  Q+ RSQ +N+ +AW +LR++L   + + REE       S     ++G G +IR
Sbjct: 282 TNTVVSMQEGRSQLQNRQKAWQVLRSRLAAAKREAREEQLINLRRSVIGVAKMGRGDKIR 341

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
           +Y     Q V D R+ +   +  DV++G  +L+  + +  A 
Sbjct: 342 TYNWG-QQRVTDHRSGLSVHNLDDVMEGGDELEKIIDSVKAW 382


>gi|157133587|ref|XP_001656262.1| mitochondrial peptide chain release factor [Aedes aegypti]
 gi|108870765|gb|EAT34990.1| mitochondrial peptide chain release factor [Aedes aegypti]
          Length = 422

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 102/323 (31%), Positives = 166/323 (51%), Gaps = 14/323 (4%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLEL-ALEEDDCSILQETSDNLQRIKLEVEY 101
           K  ++    L + +   ++ +  + +   L E+   +++D   L           L    
Sbjct: 89  KKDIKRMALLSHVVEMYEQRRIIMDNLNSLQEMSTEKDEDMLQLMREEKEAYTNILRKLD 148

Query: 102 KQFES---LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
            +  +    +  E D N   LEV AG GG E+  ++  L  MY  + + + ++TE +E  
Sbjct: 149 GEIMNGILSMDDEEDYNTLILEVAAGVGGQEAMLFSRELFDMYCGFIDYKGWETEVIETE 208

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
           D E  GI+ A++++ G +AY +LK E GVHR+ R+   + ++R HTS +++ V P  D+ 
Sbjct: 209 DTELGGIRHASIVVHGRDAYRYLKFEAGVHRVQRVPTTEKSARIHTSTATVSVIPRPDEF 268

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
               + + D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+CQ ERSQ KNK  A  
Sbjct: 269 EIE-LKDKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGMAVECQTERSQVKNKEIAKQ 327

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTS 334
            L AKL + EL+ +       +  K+++G      +IR+Y       + D R       +
Sbjct: 328 KLLAKLTQQELESKFNATQSMK--KSQVGSSLRNEKIRTYNYN-QDRITDHRVDGGTTHN 384

Query: 335 PSDVLDG--DLDDFMKATLAIKK 355
               L+G   L+D +    A+ +
Sbjct: 385 LKAFLEGGPQLEDMIAKLQAMHR 407


>gi|15806000|ref|NP_294700.1| peptide chain release factor 1 [Deinococcus radiodurans R1]
 gi|7388053|sp|P56905|RF1_DEIRA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|6458704|gb|AAF10553.1|AE001950_5 peptide chain release factor 1 [Deinococcus radiodurans R1]
          Length = 375

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 101/354 (28%), Positives = 155/354 (43%), Gaps = 18/354 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V     +  +  DP    +  E   L R  + L   ++ ++E +    D     EL
Sbjct: 7   LNELVSEFGLVERRLGDPQALADGREYARLTRRHRELLPLVTLVREREQAEADLSGAREL 66

Query: 76  ALEEDDCSILQETSDN------LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
             + D      +            R+       +   L +   D  D  LE+ AGAGG E
Sbjct: 67  LQDPDMRDPDMKELAQLEVGGLQARLAEIEAELEVLLLPTDPDDGKDVILELRAGAGGAE 126

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +   LLRMY R+A     K   L+  + +  G       + G  A+  LK E+GVHR
Sbjct: 127 AGLFVMDLLRMYERYAAGLNLKLNVLDAAESDLGGASKVVAEVTGDFAFRALKWERGVHR 186

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + R+   +S  R HTS +++ V P  +      +  S+ RID +R+ GAGGQ VNTTDSA
Sbjct: 187 VQRVPATESQGRIHTSTATVAVLPEAEPGEV-NLDLSEVRIDVFRSQGAGGQGVNTTDSA 245

Query: 250 VRITHI---PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           VR  +    P  ++V CQ  RSQ KN+ +A  +L A+L E E   RE       +  +++
Sbjct: 246 VRAVYRAGTPDEIMVICQDGRSQIKNREKALQVLTARLAERERAAREAQERQERA--SQV 303

Query: 307 GWG---RQIRSYVLQPYQMVKDLRTNIEKTS--PSDVLDGDLDDFMKATLAIKK 355
           G G    +IR+Y   P   V D R   E  +     V+ G L   + A    ++
Sbjct: 304 GSGDRSEKIRTYNY-PQNRVTDHRLEGEDKNHPLDAVMAGGLAPVVSALARAQR 356


>gi|109502759|ref|XP_001073018.1| PREDICTED: CG5705-like [Rattus norvegicus]
 gi|149050030|gb|EDM02354.1| rCG37077, isoform CRA_b [Rattus norvegicus]
          Length = 446

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 92/351 (26%), Positives = 152/351 (43%), Gaps = 21/351 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +        L+   +D  + ++  + +   R    L   ++  +EIQ+       L  + 
Sbjct: 81  EGLNDEYQSLDQCLQD--ISEDEGDRRASHRRHAELAPLVAVYQEIQEAEQAIEELESMC 138

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG---------AGG 127
              +     Q      +  ++  +          E        +              GG
Sbjct: 139 KSLNKQDEKQLQELVSEERQIIDQKIHRLYSELLEHLVPKEKCDRSNVILEVTSGRTTGG 198

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G + Y  LK E G+
Sbjct: 199 DICQQFTREIFDMYQNYSYYKHWRFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 258

Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           HR+ RI     +SR     + +   +     D +++++   D R+DT+RA GAGGQHVNT
Sbjct: 259 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKVDPRDLRVDTFRARGAGGQHVNT 318

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+ HIPTG+VV+CQQERSQ KNK  A  +LRA+LY+  ++K  +      + K +
Sbjct: 319 TDSAVRLVHIPTGLVVECQQERSQLKNKEIALRVLRARLYQQIIEK--DKCQQQNARKLQ 376

Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351
           +G      +IR+Y       V D R   E     + L G+  LD  ++  L
Sbjct: 377 VGTRAQSERIRTYNF-TQDRVTDHRIAYEVRDIKEFLRGEKCLDQLIERLL 426


>gi|149730260|ref|XP_001492759.1| PREDICTED: similar to Mitochondrial translational release factor 1
           [Equus caballus]
          Length = 446

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 99/325 (30%), Positives = 152/325 (46%), Gaps = 19/325 (5%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           + L R    L    +  +EIQ+       L  +    +     Q     L+  +   +  
Sbjct: 105 RSLNRRHAELAPLAAIYREIQEAEQAIEELESMCKSLNKQDEKQLQELALEERQTVAQKL 164

Query: 103 QFESL-------LSGEADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTE 153
                          + D ND  LEV +G   GG   Q +   +  MY  ++  +++K E
Sbjct: 165 NALYRELFQSLVPKEKYDKNDVILEVTSGRTTGGDICQQFTREIFDMYQNYSSYKRWKFE 224

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH--TSFSSIWV 211
            L     +  G+  A   I G + Y  LK E G+HR+ RI     +SR     + +   +
Sbjct: 225 LLNYTPADYGGLHHAAARISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVI 284

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
                D +++++   D RIDT+RA GAGGQHVNTTDSAVR+ H+PTG+VV+CQQERSQ K
Sbjct: 285 VLPQPDEVDVKVDPKDLRIDTFRAKGAGGQHVNTTDSAVRLVHVPTGLVVECQQERSQIK 344

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW---GRQIRSYVLQPYQMVKDLRT 328
           NK  A  +LRA+LY+  ++K  +      + K ++G      +IR+Y       V D R 
Sbjct: 345 NKEIALRVLRARLYQQIIEK--DKRQQQSARKLQVGTRAQSERIRTYNF-TQDRVTDHRI 401

Query: 329 NIEKTSPSDVLDGD--LDDFMKATL 351
             E  +  + L G+  LD  ++  L
Sbjct: 402 AYEVRNIKEFLHGEKCLDHLIQRLL 426


>gi|78042486|ref|NP_001030185.1| peptide chain release factor 1, mitochondrial precursor [Bos
           taurus]
 gi|118573310|sp|Q3MHI7|RF1M_BOVIN RecName: Full=Peptide chain release factor 1, mitochondrial;
           Short=MRF-1; Short=MtRF-1; Flags: Precursor
 gi|75773697|gb|AAI05225.1| Mitochondrial translational release factor 1 [Bos taurus]
 gi|296481791|gb|DAA23906.1| peptide chain release factor 1, mitochondrial precursor [Bos
           taurus]
          Length = 447

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 101/325 (31%), Positives = 150/325 (46%), Gaps = 19/325 (5%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           + L R    L       KEIQ+       L  +    +     Q     L+  +   +  
Sbjct: 106 RSLTRRHAELAPLAVIYKEIQEAEQAIEELESMCKSLNKQDEKQLQELALEERQTIAQKI 165

Query: 103 QFESL-------LSGEADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTE 153
                          + D ND  LEV +G   GG   Q +   +  MY  ++  + ++ E
Sbjct: 166 NMLYSELFQSLLPKEKYDKNDVILEVTSGRTTGGDICQQFTREIFDMYQNYSSYKHWRFE 225

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH--TSFSSIWV 211
            L     +  G+  A   I G N Y  LK E G+HR+ RI     +SR     + +   +
Sbjct: 226 LLNYTPADYGGLHHAAARISGDNVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVI 285

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
                D +++++   D RIDT+RA GAGGQHVNTTDSAVR+ HIPTG+VV+CQQERSQ K
Sbjct: 286 VLPHPDEVDVKVDPKDLRIDTFRAKGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQIK 345

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW---GRQIRSYVLQPYQMVKDLRT 328
           NK  A  +LRA+LY+  ++K  +      + K ++G      +IR+Y       V D R 
Sbjct: 346 NKEIALRVLRARLYQQIIEK--DKCQQRSARKLQVGTRAQSERIRTYNF-TQDRVTDHRI 402

Query: 329 NIEKTSPSDVLDGD--LDDFMKATL 351
             E  +  + L G+  LD  ++  L
Sbjct: 403 AYEVRNIKEFLCGEKCLDQLIQRLL 427


>gi|91081965|ref|XP_967739.1| PREDICTED: similar to AGAP012082-PA, partial [Tribolium castaneum]
          Length = 383

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 103/310 (33%), Positives = 152/310 (49%), Gaps = 14/310 (4%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL-- 108
            L   I+ + E +D + +   L EL  E+DD        + L          +       
Sbjct: 66  QLQPLINALNERKDAVENIQNLSELLNEKDDDIRKLAEEEKLTFESRIKSIDEKLLEAIL 125

Query: 109 --SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
               E + N   LEV+AG GG E+  +AN L  MY  +AE + ++T+  +    +  GI+
Sbjct: 126 PSDKEDECNSIVLEVNAGVGGQEAMLFANELFEMYCNFAEHQGWETQIADYSPVDIGGIR 185

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            A+ LI GP  + + K E GVHR+ RI   +   R HTS  S+ V       IE+ I   
Sbjct: 186 HASALINGPQVFQFFKHEAGVHRVQRIPTTEKAGRIHTSTVSV-VALPQPTEIEVNIDNK 244

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D +I+T RASGAGGQHVNTT+SAVR+TH+PTG  V+CQ +RSQ KN+  A   LRA +Y+
Sbjct: 245 DLKIETKRASGAGGQHVNTTESAVRVTHLPTGFSVECQVDRSQVKNRQIALAKLRALIYQ 304

Query: 287 LELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGD 342
            +L+++          K ++       +IR+Y   P   + D R       +    L G+
Sbjct: 305 RDLEEQIARNENM--RKNQVRSNFRNEKIRTYNF-PQDRITDHRLQGCNVHNLKGFLQGN 361

Query: 343 --LDDFMKAT 350
             L   +K  
Sbjct: 362 DALGSLIKKL 371


>gi|270007320|gb|EFA03768.1| hypothetical protein TcasGA2_TC013879 [Tribolium castaneum]
          Length = 387

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 103/310 (33%), Positives = 152/310 (49%), Gaps = 14/310 (4%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL-- 108
            L   I+ + E +D + +   L EL  E+DD        + L          +       
Sbjct: 66  QLQPLINALNERKDAVENIQNLSELLNEKDDDIRKLAEEEKLTFESRIKSIDEKLLEAIL 125

Query: 109 --SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
               E + N   LEV+AG GG E+  +AN L  MY  +AE + ++T+  +    +  GI+
Sbjct: 126 PSDKEDECNSIVLEVNAGVGGQEAMLFANELFEMYCNFAEHQGWETQIADYSPVDIGGIR 185

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
            A+ LI GP  + + K E GVHR+ RI   +   R HTS  S+ V       IE+ I   
Sbjct: 186 HASALINGPQVFQFFKHEAGVHRVQRIPTTEKAGRIHTSTVSV-VALPQPTEIEVNIDNK 244

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D +I+T RASGAGGQHVNTT+SAVR+TH+PTG  V+CQ +RSQ KN+  A   LRA +Y+
Sbjct: 245 DLKIETKRASGAGGQHVNTTESAVRVTHLPTGFSVECQVDRSQVKNRQIALAKLRALIYQ 304

Query: 287 LELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGD 342
            +L+++          K ++       +IR+Y   P   + D R       +    L G+
Sbjct: 305 RDLEEQIARNENM--RKNQVRSNFRNEKIRTYNF-PQDRITDHRLQGCNVHNLKGFLQGN 361

Query: 343 --LDDFMKAT 350
             L   +K  
Sbjct: 362 DALGSLIKKL 371


>gi|326436517|gb|EGD82087.1| peptide chain release factor 2 [Salpingoeca sp. ATCC 50818]
          Length = 449

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 108/352 (30%), Positives = 168/352 (47%), Gaps = 25/352 (7%)

Query: 16  WDNAVQRLSFLNT---KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
            D  ++R   L T   +  +     +        +     D          D   +   L
Sbjct: 81  LDRVLERRRDLQTTIVRLAEEG---DSESVVEKTQLLAKTDALAEAASAWFDLSKEMEEL 137

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFE----SLLSGEADSNDAYLEVHAGAGGT 128
             +   E D  +       L+ ++      +       +   +AD   A +E+ AG GGT
Sbjct: 138 EHMQRTETDPDLKAMAVSELKEVRARAPEVEQLLLSAMVPHDDADDGSAIVEIRAGTGGT 197

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE----EAGIKSATLLIKGPNAYGWLKGE 184
           E+  +A  L ++Y   A +R ++ + +     E    + G+K  T  + G +A+G LK E
Sbjct: 198 EAAIFAKDLYKLYQHLAVRRGWRVQEMTTSYTEGVGSDDGLKEVTFSVNGQDAFGSLKFE 257

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            GVHR+ R+   ++  R HTS +++ V P     + + I E D ++DTYR+ GAGGQHVN
Sbjct: 258 SGVHRVQRVPITEAAGRIHTSTATVAVLP-QASEVTVSIHERDIKMDTYRSGGAGGQHVN 316

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVR+THIPTG+VV  Q ERSQH+N+  A  M+RA++Y+ E +K        E  + 
Sbjct: 317 TTDSAVRLTHIPTGIVVAVQSERSQHRNRDVAMKMIRARVYQQEREK--AQLERAEQRRA 374

Query: 305 EIG-----WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
            IG        +IR+Y   P   V D R N+ + S S VL+ D LD  + + 
Sbjct: 375 LIGGTPGSRSDRIRTYNF-PQDRVTDHRVNV-RASLSSVLEDDGLDGIISSL 424


>gi|255083621|ref|XP_002508385.1| predicted protein [Micromonas sp. RCC299]
 gi|226523662|gb|ACO69643.1| predicted protein [Micromonas sp. RCC299]
          Length = 366

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 115/325 (35%), Positives = 167/325 (51%), Gaps = 22/325 (6%)

Query: 16  WDNAVQRLSFLNTKT-EDPHLWQNVIEAKML---MRERQHLDNAISFIKEIQDRLCDNLI 71
            +    R   L      DP        A  +    +E    +  +     +++R  +   
Sbjct: 9   LEAVSARHDALVAALVADP-----PPRAAEIARINKELARAERVVRAYAAVKERRHETAS 63

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG------EADSNDAYLEVHAGA 125
           L ++  E              +   LE      E  L+       EAD +   LEV AGA
Sbjct: 64  LEQVIAESAGVDAEMAQMAEDELATLEETTPALEETLAHLLLPADEADDSGVILEVRAGA 123

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  LLRMY  +A K  ++ E +  +  E  G+K AT  + G + YG LK E 
Sbjct: 124 GGDEAALFAADLLRMYEMFARKTGWRFELVAANASEAGGVKEATASLAGDDVYGRLKFES 183

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   ++  R HTS +S+ V P   +++E++I + D +IDT RASGAGGQHVNT
Sbjct: 184 GVHRVQRVPATETQGRVHTSTASVAVLP-QAETVELDIRDDDLKIDTMRASGAGGQHVNT 242

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVRITH+PTGV V  Q ERSQHKNK +A  +LRA++YELE +K  +     +  ++ 
Sbjct: 243 TNSAVRITHVPTGVTVVMQDERSQHKNKEKAMKVLRARVYELERRKLADAR--ADQRRSL 300

Query: 306 IGWG---RQIRSYVLQPYQMVKDLR 327
           IG G    ++R+Y  +    VKD R
Sbjct: 301 IGSGDRSERVRTYNYK-EGRVKDHR 324


>gi|301760227|ref|XP_002915915.1| PREDICTED: peptide chain release factor 1, mitochondrial-like
           [Ailuropoda melanoleuca]
 gi|281349098|gb|EFB24682.1| hypothetical protein PANDA_003948 [Ailuropoda melanoleuca]
          Length = 445

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 102/325 (31%), Positives = 151/325 (46%), Gaps = 19/325 (5%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           K L R    L    +  +EIQ+       L  +    +     Q     L+  +   +  
Sbjct: 104 KSLNRRHAELAPLAAIYQEIQEAEQAIEELDSMCKSLNKQDEKQLQELALEERQTIAQKI 163

Query: 103 QFES-------LLSGEADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTE 153
                      +   + D ND  LEV AG   GG   Q +   +  MY  ++  + +K E
Sbjct: 164 NMLYSELFQSLVPKEKYDKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYSSYKNWKFE 223

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH--TSFSSIWV 211
            L     +  G+  A   I G + Y  LK E G+HR+ RI     +SR     + +   +
Sbjct: 224 LLNYTPADYGGLHHAAARISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVI 283

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
                D +++++   D RIDT+RA GAGGQHVNTTDSAVR+ HIPTG+VV+CQQERSQ K
Sbjct: 284 VLPQPDEVDVKVDPKDLRIDTFRAKGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQIK 343

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW---GRQIRSYVLQPYQMVKDLRT 328
           NK  A  +LRA+LY+  ++K  +      + K ++G      +IR+Y       V D R 
Sbjct: 344 NKEIALRVLRARLYQQIIEK--DKCQQQSTRKLQVGTRAQSERIRTYNF-TQDRVTDHRI 400

Query: 329 NIEKTSPSDVLDGD--LDDFMKATL 351
             E     + L G+  LD  ++  L
Sbjct: 401 AYEVRDIKEFLCGEKCLDQLIQTLL 425


>gi|270132345|ref|NP_666072.3| peptide chain release factor 1, mitochondrial precursor [Mus
           musculus]
 gi|27151667|sp|Q8K126|RF1M_MOUSE RecName: Full=Peptide chain release factor 1, mitochondrial;
           Short=MRF-1; Short=MtRF-1; Flags: Precursor
 gi|20810364|gb|AAH28898.1| Mitochondrial translational release factor 1 [Mus musculus]
 gi|26336078|dbj|BAC31724.1| unnamed protein product [Mus musculus]
 gi|148703819|gb|EDL35766.1| mitochondrial translational release factor 1, isoform CRA_a [Mus
           musculus]
          Length = 446

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 100/351 (28%), Positives = 159/351 (45%), Gaps = 21/351 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           ++  +    L+   +   + +N  + + L R    L    +  +EIQ+       L  L 
Sbjct: 81  EDLNKEYQTLDQCLQ--GISENEGDRRALHRRHAQLAPLAAVYQEIQEAEQAIEELESLC 138

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFES-------LLSGEADSNDAYLEVHAG--AGG 127
              +     Q      +  ++  +             +   + D +D  LEV +G   GG
Sbjct: 139 KSLNKQDEKQLQELVSEERQIIDQKIHRLYSELLERLVPKEKYDWSDVILEVTSGRTTGG 198

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + +K E L     +  G+  A   I G + Y  LK E G+
Sbjct: 199 DICQQFTREIFDMYQNYSYYKHWKFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 258

Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           HR+ RI     +SR     + +   +     D +++++   D R+DT+RA GAGGQHVNT
Sbjct: 259 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKVDPKDLRVDTFRARGAGGQHVNT 318

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+ HIPTG+VV+CQQERSQ KNK  A  +LRA+LY+  ++K           K +
Sbjct: 319 TDSAVRLVHIPTGLVVECQQERSQLKNKEIALRVLRARLYQQIIEKDRCQQQNA--RKLQ 376

Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351
           +G      +IR+Y       V D R   E     + L G+  LD  ++  L
Sbjct: 377 VGTRAQSERIRTYNF-TQDRVTDHRIAYEVRDIKEFLRGEKCLDQLIERLL 426


>gi|149003372|ref|ZP_01828261.1| peptide chain release factor 2 [Streptococcus pneumoniae SP14-BS69]
 gi|147758555|gb|EDK65553.1| peptide chain release factor 2 [Streptococcus pneumoniae SP14-BS69]
          Length = 145

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 71/143 (49%), Positives = 98/143 (68%)

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P +DD+IE+EI E D ++DT+R+ GAGGQ+VN   + VR+THIPTG+VVQ   +R+Q+ 
Sbjct: 1   MPELDDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 60

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           N+ +A  ML+AKLY++E +K+    +  +  K EI WG QIRSYV  PY MVKD RT+ E
Sbjct: 61  NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 120

Query: 332 KTSPSDVLDGDLDDFMKATLAIK 354
                 V+DGDLD F+ A L  +
Sbjct: 121 VAQVDKVMDGDLDGFIDAYLKWR 143


>gi|47096965|ref|ZP_00234541.1| peptide chain release factor 1 [Listeria monocytogenes str. 1/2a
           F6854]
 gi|47014675|gb|EAL05632.1| peptide chain release factor 1 [Listeria monocytogenes str. 1/2a
           F6854]
          Length = 314

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 87/276 (31%), Positives = 142/276 (51%), Gaps = 5/276 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   LN    DP +  +    + L +E+  +   +   +E ++         EL
Sbjct: 5   LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQINETKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E+ D  + +   +    ++ E    +       +     D  +  LE+   AGG E+ 
Sbjct: 65  LGEKLDDEMREMAKEEFAELQKEKADLEERLKLLLVPKDPNDDKNVILEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  L RMY+++AE R +K E ++ +     G K    ++ G +A+  +K E G HR+ 
Sbjct: 125 LFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMMNGNDAFSRMKYENGAHRVQ 184

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R+   +S  R HTS +++ + P   + +EIE+ + D R DT+ ++GAGGQ VNTT SAVR
Sbjct: 185 RVPETESGGRIHTSTATVAILP-EAEEVEIELHDKDIRTDTFASTGAGGQSVNTTMSAVR 243

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           +THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+ 
Sbjct: 244 LTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDK 279


>gi|291393031|ref|XP_002713016.1| PREDICTED: mitochondrial translational release factor 1
           [Oryctolagus cuniculus]
          Length = 446

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 103/351 (29%), Positives = 161/351 (45%), Gaps = 21/351 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           ++  +    L+   +   +  +    K L R    L    +  +EI +       L  + 
Sbjct: 81  EDLHKEYQTLDECLQRISV-NDGGR-KSLTRRHAELAPLAAIYQEILEAQQAIEELESMC 138

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFES-------LLSGEADSNDAYLEVHAG--AGG 127
              +     Q  +  L+  +   E             +   + D ND  LEV +G   GG
Sbjct: 139 KSLNTQDEKQLQALALEERQTIDEKLNMLYSELFQNLVPKEKYDKNDVILEVISGRTTGG 198

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + +K E L     E  G+  A   I G + Y  LK E G+
Sbjct: 199 DICQQFTREIFDMYQNYSCYKHWKFELLNYTPAEYGGLHHAAARISGDSVYKHLKYEGGI 258

Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           HR+ RI     +SR     + +   +     D +++++   D RIDT+RA GAGGQHVNT
Sbjct: 259 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKVDPKDLRIDTFRAKGAGGQHVNT 318

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+ HIPTG+VV+CQQERSQ KNK  A ++LRA+LY+  ++K  +      + K +
Sbjct: 319 TDSAVRLVHIPTGLVVECQQERSQIKNKEIALHVLRARLYQQIIEK--DKCQQQSARKLQ 376

Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351
           +G      +IR+Y       V D R + E     + L G+  LD  ++  L
Sbjct: 377 VGTRAQSERIRTYNF-TQDRVTDHRISYEVRDIKEFLCGEKCLDQLIQRLL 426


>gi|158300556|ref|XP_320444.4| AGAP012082-PA [Anopheles gambiae str. PEST]
 gi|157013216|gb|EAA00433.4| AGAP012082-PA [Anopheles gambiae str. PEST]
          Length = 384

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 105/326 (32%), Positives = 166/326 (50%), Gaps = 14/326 (4%)

Query: 40  IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL-ALEEDDCSILQETSDNLQRIKLE 98
              +  ++    L N +   ++ +  + +   L EL   ++D+   L +         L 
Sbjct: 49  QRTRKDIQRMLLLSNVVEMYEQRKIIVDNLSSLKELKDDKDDEMVQLLKEEREAYGSILF 108

Query: 99  VEYKQFES---LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
               +  +    +  E D     +EV AG GG E+  +A  L  MY  + E + ++ E L
Sbjct: 109 RLDSEILNGILSMDDEEDYGSLIMEVTAGVGGQEAMLFARELFDMYCGYVEYKGWEVEML 168

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           +  + +  G + AT +I GP+AY +LK E GVHR+ RI   + + R HTS  ++ + P  
Sbjct: 169 QTENTDIGGTRHATTVISGPDAYRYLKHEGGVHRVQRIPATEKSGRIHTSTVTVSIIPRP 228

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD  ++E+ E D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+CQ ERSQ KN+  
Sbjct: 229 DDF-QVELKEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGIAVECQTERSQQKNREI 287

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRT-NIE 331
           A   L AKL ++EL+ R       +  K+++G      +IR+Y       + D R     
Sbjct: 288 AKQKLTAKLMQIELEARFSSTQALK--KSQVGQSLRNEKIRTYNFN-QDRITDHRIEGGT 344

Query: 332 KTSPSDVLDG--DLDDFMKATLAIKK 355
             +    L+G   LDD ++     ++
Sbjct: 345 AHNLKGFLEGGEQLDDMIEKLRRSQR 370


>gi|294994856|ref|ZP_06800547.1| peptide chain release factor 1 [Mycobacterium tuberculosis 210]
          Length = 206

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 81/200 (40%), Positives = 113/200 (56%), Gaps = 7/200 (3%)

Query: 162 EAGIKSATLLIKG-----PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
             G K ATL I          +  +K E GVHR+ R+   +S  R HTS + + VYP  +
Sbjct: 1   MGGYKDATLAIASKADTPDGVWSRMKFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPE 60

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           +  +++I ESD RID +R+SG GGQ VNTTDSAVRITH+PTG+VV CQ ERSQ +NK +A
Sbjct: 61  EVGQVQIDESDLRIDVFRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKTRA 120

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTE-IGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
             +L A+L  +  ++    A+   +S+   +    +IR+Y   P   + D R   +  + 
Sbjct: 121 LQVLAARLQAMAEEQALADASADRASQIRTVDRSERIRTYNF-PENRITDHRIGYKSHNL 179

Query: 336 SDVLDGDLDDFMKATLAIKK 355
             VLDGDLD    A  A  K
Sbjct: 180 DQVLDGDLDALFDALSAADK 199


>gi|297693940|ref|XP_002824258.1| PREDICTED: peptide chain release factor 1, mitochondrial-like
           isoform 1 [Pongo abelii]
 gi|297693942|ref|XP_002824259.1| PREDICTED: peptide chain release factor 1, mitochondrial-like
           isoform 2 [Pongo abelii]
          Length = 445

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 100/351 (28%), Positives = 156/351 (44%), Gaps = 21/351 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +N  +    L    +   +  N    + L R    L    +  +EIQ+       L  + 
Sbjct: 80  ENLSKEYQTLEQCLQHIPV--NEENQRSLNRRHAELAPLAAIYQEIQETEQAIEELESMC 137

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFES-------LLSGEADSNDAYLEVHAG--AGG 127
              +     Q     L+  +   +             +   + D ND  LEV AG   GG
Sbjct: 138 KSLNKQDEKQLQELALEERQAIDQKINMLYNELFQSLVPKEKYDKNDVILEVAAGRTTGG 197

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G   Y  LK E G+
Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGI 257

Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           HR+ RI     +SR     + ++  +     D +++++   D RIDT+RA G GGQHVN 
Sbjct: 258 HRVQRIPEVGLSSRMQRIHTGTTSVIVLPQPDEVDVKLDPKDLRIDTFRAKGPGGQHVNK 317

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+ HIPTG+VV+CQQERSQ KNK  A+ +LRA+LY+  ++K  +      + K +
Sbjct: 318 TDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEK--DKRQQQSARKLQ 375

Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351
           +G      +IR+Y       + D R   E     + L G   LD  ++  L
Sbjct: 376 VGTRAQSERIRTYNF-TQDRISDHRIAYEVRDIKEFLCGGKGLDQLIQRLL 425


>gi|313636342|gb|EFS02127.1| peptide chain release factor 2 [Listeria seeligeri FSL S4-171]
          Length = 142

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 82/139 (58%), Positives = 100/139 (71%)

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           DD IEIE+   D +IDTYRA+GAGGQH+NTTDSAVR+THIP+G+VV CQ ERSQ KN+ Q
Sbjct: 2   DDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQLKNRDQ 61

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A  ML+ KLY+ E +++E         + EIGWG QIRSYV  PY MVKD RTN E  + 
Sbjct: 62  AMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNYETGNI 121

Query: 336 SDVLDGDLDDFMKATLAIK 354
             V+DGDLDDF+ A L  +
Sbjct: 122 QAVMDGDLDDFINAYLRSR 140


>gi|193786181|dbj|BAG51464.1| unnamed protein product [Homo sapiens]
          Length = 445

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 102/351 (29%), Positives = 156/351 (44%), Gaps = 21/351 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +N  +    L    +   +  N    + L R    L    +  +EIQ+       L  + 
Sbjct: 80  ENLSKEYQTLEQCLQHIPV--NEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMC 137

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFES-------LLSGEADSNDAYLEVHAG--AGG 127
              +     Q     L+  +   +             +   + D ND  LEV AG   GG
Sbjct: 138 KSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 197

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G   Y  LK E G+
Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADNGGLHHAAARISGDGVYKHLKYEGGI 257

Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           HR+ RI     +SR     + +   +     D +++++   D RIDT+RA GAGGQHVN 
Sbjct: 258 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHVNK 317

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+ HIPTG+VV+CQQERSQ KNK  A+ +LRA+LY+  ++K  +      + K +
Sbjct: 318 TDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEK--DKRQQQSARKLQ 375

Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351
           +G      +IR+Y       V D R   E     + L G   LD  ++  L
Sbjct: 376 VGTRAQSERIRTYNF-TQDRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLL 425


>gi|332241803|ref|XP_003270069.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 1
           [Nomascus leucogenys]
 gi|332241805|ref|XP_003270070.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 2
           [Nomascus leucogenys]
          Length = 445

 Score =  153 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 103/351 (29%), Positives = 159/351 (45%), Gaps = 21/351 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +N  +    L    +   +  N    + L R    L    +  +EIQ+       L  + 
Sbjct: 80  ENLSKEYQTLEQCLQHIPV--NEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMC 137

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFES-------LLSGEADSNDAYLEVHAG--AGG 127
              +     Q     L+  +   +             +   + D ND  LEV AG   GG
Sbjct: 138 KSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 197

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G + Y  LK E G+
Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 257

Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           HR+ RI     +SR     + +   +     D ++++++  D RIDT+RA GAGGQHVNT
Sbjct: 258 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLNPKDLRIDTFRAKGAGGQHVNT 317

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+ HIPTG+VV+CQQERSQ KNK  A+ +LRA+LY+  ++K  +      + K +
Sbjct: 318 TDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEK--DRRQQQSARKLQ 375

Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351
           +G      +IR+Y       V D R   E     + L G   LD  ++  L
Sbjct: 376 VGTRAQSERIRTYNF-TQDRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLL 425


>gi|145485050|ref|XP_001428534.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124395620|emb|CAK61136.1| unnamed protein product [Paramecium tetraurelia]
          Length = 390

 Score =  153 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 103/346 (29%), Positives = 173/346 (50%), Gaps = 21/346 (6%)

Query: 19  AVQRLSFLNTKTE---DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ---DRLCDNLIL 72
             QRL  LNT+ E   D  +  ++ E K   R    L   I   K+IQ     + D   L
Sbjct: 30  INQRLGELNTEYETYQDQTIKGDMNEIKR--RRMNELQPKIHIYKQIQASVSVIEDAKQL 87

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS--NDAYLEVHAGAGGTES 130
           + +    D+ S+L E   +      + +      L+  +         +EV AG GG+E 
Sbjct: 88  IGMGGSSDEISMLNEEIQSQIEYLKKYQDDALSQLIEEDEYDHIRQLNVEVRAGVGGSEG 147

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEE--AGIKSATLLIKGPNAYGWLKGEQGVH 188
             +A  ++ M   +A  + +    + I    +   G K+  L I G N Y  LK E GVH
Sbjct: 148 SLFAEDIIGMIQNYASLQNWDCRVISIQKDNQIGKGCKTGILQINGENVYQHLKCESGVH 207

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           +++R+   ++  R H+S +S+ V P    +    +S+ D R +  RASG GGQHVN T+S
Sbjct: 208 KVIRVPETEAKGRLHSSTASMIVLP--KVTDSFHLSDKDLRYEYMRASGPGGQHVNKTES 265

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI-- 306
           A RITH+PTG+ V   ++RSQ +NK +A+ +LR KL+ + +Q+++E   + ++ K+++  
Sbjct: 266 ACRITHVPTGIQVVNMEDRSQERNKQRAYQILRDKLFAIHVQEKQE--RMAQTRKSQVTG 323

Query: 307 -GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
                +IR+Y   P + + D RTN+       +L G+ L +F++  
Sbjct: 324 SDRSDKIRTYNF-PQERITDHRTNLTLYGMEKMLSGELLGEFIQKY 368


>gi|34577120|ref|NP_004285.2| peptide chain release factor 1, mitochondrial precursor [Homo
           sapiens]
 gi|114651371|ref|XP_509647.2| PREDICTED: peptide chain release factor 1, mitochondrial isoform 5
           [Pan troglodytes]
 gi|114651373|ref|XP_001150158.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 3
           [Pan troglodytes]
 gi|114651375|ref|XP_001150218.1| PREDICTED: mitochondrial translational release factor 1 isoform 4
           [Pan troglodytes]
 gi|62512140|sp|O75570|RF1M_HUMAN RecName: Full=Peptide chain release factor 1, mitochondrial;
           Short=MRF-1; Short=MtRF-1; Flags: Precursor
 gi|27503783|gb|AAH42196.1| Mitochondrial translational release factor 1 [Homo sapiens]
 gi|55958420|emb|CAI16615.1| mitochondrial translational release factor 1 [Homo sapiens]
 gi|119629053|gb|EAX08648.1| mitochondrial translational release factor 1, isoform CRA_a [Homo
           sapiens]
 gi|119629054|gb|EAX08649.1| mitochondrial translational release factor 1, isoform CRA_a [Homo
           sapiens]
 gi|119629056|gb|EAX08651.1| mitochondrial translational release factor 1, isoform CRA_a [Homo
           sapiens]
 gi|119629058|gb|EAX08653.1| mitochondrial translational release factor 1, isoform CRA_a [Homo
           sapiens]
          Length = 445

 Score =  153 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 102/351 (29%), Positives = 156/351 (44%), Gaps = 21/351 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +N  +    L    +   +  N    + L R    L    +  +EIQ+       L  + 
Sbjct: 80  ENLSKEYQTLEQCLQHIPV--NEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMC 137

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFES-------LLSGEADSNDAYLEVHAG--AGG 127
              +     Q     L+  +   +             +   + D ND  LEV AG   GG
Sbjct: 138 KSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 197

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G   Y  LK E G+
Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGI 257

Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           HR+ RI     +SR     + +   +     D +++++   D RIDT+RA GAGGQHVN 
Sbjct: 258 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHVNK 317

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+ HIPTG+VV+CQQERSQ KNK  A+ +LRA+LY+  ++K  +      + K +
Sbjct: 318 TDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEK--DKRQQQSARKLQ 375

Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351
           +G      +IR+Y       V D R   E     + L G   LD  ++  L
Sbjct: 376 VGTRAQSERIRTYNF-TQDRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLL 425


>gi|294623963|ref|ZP_06702760.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292601738|gb|EFF45678.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 178

 Score =  153 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 85/145 (58%), Positives = 109/145 (75%), Gaps = 1/145 (0%)

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           ++V P VDD+IEI+I+ +D R D YR+SGAGGQHVN T+SAVRITHIPT  VV CQ  RS
Sbjct: 1   MFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTVVACQTGRS 60

Query: 269 QHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT 328
           QH+N+  A  ML AKLYELE+QKR    +  E++K++IGWG QIR+YVL     +KDLRT
Sbjct: 61  QHQNRDNAMKMLAAKLYELEVQKRNVERDALEATKSDIGWGSQIRNYVLD-QSRIKDLRT 119

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAI 353
            IE++    VLDGDLD+F++A+L  
Sbjct: 120 GIERSDTQKVLDGDLDEFVEASLKA 144


>gi|241954572|ref|XP_002420007.1| peptide chain release factor, mitochondrial precursor, putative
           [Candida dubliniensis CD36]
 gi|223643348|emb|CAX42223.1| peptide chain release factor, mitochondrial precursor, putative
           [Candida dubliniensis CD36]
          Length = 392

 Score =  153 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 92/346 (26%), Positives = 146/346 (42%), Gaps = 21/346 (6%)

Query: 17  DNAVQRLSFLNTKTED---PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
               Q    L+ K  D   P L         ++     L+       E+ +   D     
Sbjct: 53  QTIQQEHKELSEKLADKYIPDLQVKFDNYTNILSMFGKLETLTQEYIELTEITDD----- 107

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
                    +  +  S  + +I+  V     +     +       +E+  G GG E+  +
Sbjct: 108 ---PGLYKEAQEELKSIVIPQIEKLVSELTVKLRPPVKYADKGCIIELRPGVGGNEASLF 164

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
              LL MY  +A +  +K + +         I  A L I    +Y  ++ E GVHR+ RI
Sbjct: 165 TGDLLNMYINFASEMNWKYKIISEGKNSSGFINEAILSIDTLGSYDIMRHESGVHRVQRI 224

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRIDTYRASGAGGQHVNTT 246
              ++  R HTS S++ V P + +         E   +  + RIDT RA G GGQHVNTT
Sbjct: 225 PETETKGRVHTSTSAVVVLPKLSEGNESSLKDDERVFAPGEVRIDTMRAGGKGGQHVNTT 284

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TE 305
           DSAVR+ HIPTG++V  Q ERSQ  NKA+A+ +LR++L + E ++         + + + 
Sbjct: 285 DSAVRLVHIPTGMIVIQQDERSQPLNKAKAFAILRSRLAQKEQEEEILRQKKLRTDQVSS 344

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKAT 350
                +I++Y  +    V D R N        VL+G  L   +   
Sbjct: 345 TDRSDKIKTYNYK-ENRVTDHRINYSMHDLQGVLEGRKLGQLIDTY 389


>gi|194040714|ref|XP_001926694.1| PREDICTED: peptide chain release factor 1, mitochondrial-like
           isoform 1 [Sus scrofa]
 gi|311266318|ref|XP_003131053.1| PREDICTED: peptide chain release factor 1, mitochondrial-like
           isoform 2 [Sus scrofa]
          Length = 446

 Score =  152 bits (384), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 101/325 (31%), Positives = 150/325 (46%), Gaps = 19/325 (5%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           + L R    L       KEIQ+       L  +    +     Q     L+  +   +  
Sbjct: 105 RSLNRRHAELAPLAVIYKEIQEAEQAIEELESMCKSLNKQDEKQLQELALEEKRTIAQKI 164

Query: 103 QFES-------LLSGEADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTE 153
                      +   + D ND  LEV +G   GG   Q +   +  MY  ++  + +  E
Sbjct: 165 NMLYHELFQSLVPKEKYDKNDVILEVTSGRTTGGDICQQFTREIFDMYQNYSSYKHWTFE 224

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH--TSFSSIWV 211
            L     +  G+  A   I G N Y  LK E G+HR+ RI     +SR     + +   +
Sbjct: 225 LLNYTPADYGGLHHAAARISGANVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVI 284

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
                D +++++   D RIDT+RA GAGGQHVNTTDSAVR+ H+PTG+VV+CQQERSQ K
Sbjct: 285 VLPQPDEVDVKVDPKDLRIDTFRAKGAGGQHVNTTDSAVRLVHVPTGLVVECQQERSQIK 344

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW---GRQIRSYVLQPYQMVKDLRT 328
           NK  A  +LRA+LY+  ++K  E      + K ++G      +IR+Y       V D R 
Sbjct: 345 NKEIALRVLRARLYQQIIEK--EKCQQQSARKLQVGTRAQSERIRTYNF-TQDRVTDHRI 401

Query: 329 NIEKTSPSDVLDGD--LDDFMKATL 351
             E  +  + L G+  LD  ++  L
Sbjct: 402 AYEVRNIKEFLCGEKCLDLLIQRLL 426


>gi|315047700|ref|XP_003173225.1| peptide chain release factor 1 [Arthroderma gypseum CBS 118893]
 gi|311343611|gb|EFR02814.1| peptide chain release factor 1 [Arthroderma gypseum CBS 118893]
          Length = 438

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 86/341 (25%), Positives = 153/341 (44%), Gaps = 31/341 (9%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           +   +    L    + +++          L  L  E    + L+  +++     +     
Sbjct: 71  RAAAKRIGELAPVANALRDWDTAHESITELQGLVNEPSTDAELKSLAEDDITTTIGTLSS 130

Query: 103 -----QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
                +   +           +E+  GAGG E+  +A  +LRMYT +   R  +T  +++
Sbjct: 131 LSATLKRALIPRHPFADMPCLIEIRPGAGGDEAGLFAAEMLRMYTSFCSSRGLRTTIIKM 190

Query: 158 HDGEEAG------IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
              + AG      +    + ++ P +Y  L+ E GVHR+ R+   ++  R HTS  S+ +
Sbjct: 191 EAEDGAGAGAEDRLSEVVMEVETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMI 250

Query: 212 YP-------------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
            P               D + +  ++  D + + +RASGAGGQHVN T+SAVR+TH+PTG
Sbjct: 251 LPSFPESNQEDSPLNFDDPNSDYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHVPTG 310

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRS 314
            V+  Q  RSQH+N+ +AW +LRAKL +   + RE+              + G G +IR+
Sbjct: 311 TVISMQDSRSQHENRRKAWLLLRAKLAQARREAREQEMMELRRGAMGGVNKTGRGDKIRT 370

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
           Y         D R+ +   +   V+DG  +L+  +++    
Sbjct: 371 YNF-TQSRCTDHRSGMTVHNIGKVMDGGENLEKIIESVQNW 410


>gi|73989054|ref|XP_848713.1| PREDICTED: similar to mitochondrial translational release factor 1
           isoform 2 [Canis familiaris]
          Length = 444

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 102/325 (31%), Positives = 150/325 (46%), Gaps = 19/325 (5%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           K L R    L    +  +EIQ+       L  +          Q     L+  +   E  
Sbjct: 103 KSLNRRHAELAPLAAIYQEIQEAEQAIEELDSMCKSLSKQDEKQLQELALEERQTIAEKI 162

Query: 103 QFES-------LLSGEADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTE 153
                      +   + D ND  +EV +G   GG   Q +   +  MY  ++  + +K E
Sbjct: 163 NVLYSELFQSLVPKEKYDKNDVIIEVTSGRTTGGDICQQFTREIFDMYQNYSSYKNWKFE 222

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH--TSFSSIWV 211
            L     +  G+  A   I G N Y  LK E GVHR+ RI     ++R     + +   +
Sbjct: 223 LLNYTPADYGGLHHAAARISGDNVYKHLKYEGGVHRVQRIPEVGLSARMQRIHTGTMSVI 282

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
                D +++++   D RIDT+RA GAGGQHVNTTDSAVR+ HIPTG+VV+CQQERSQ K
Sbjct: 283 VLPQPDEVDVKVDPKDLRIDTFRAKGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQIK 342

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW---GRQIRSYVLQPYQMVKDLRT 328
           NK  A  +LRA+LY+  ++K  +      + K ++G      +IR+Y       V D R 
Sbjct: 343 NKEIALRVLRARLYQQIIEK--DKCQQQSTRKLQVGTRAQSERIRTYNF-TQDRVTDHRI 399

Query: 329 NIEKTSPSDVLDGD--LDDFMKATL 351
             E     + L G+  LD  ++  L
Sbjct: 400 AYEVRGIKEFLCGEKCLDQLIQRLL 424


>gi|109120568|ref|XP_001090893.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 3
           [Macaca mulatta]
 gi|109120570|ref|XP_001090782.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 2
           [Macaca mulatta]
          Length = 445

 Score =  152 bits (383), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 103/351 (29%), Positives = 158/351 (45%), Gaps = 21/351 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +N  +    L    +   +  N    + L R    L    +  +EIQ+       L  + 
Sbjct: 80  ENLNKEYQTLEQCLQHIPV--NEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMC 137

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFES-------LLSGEADSNDAYLEVHAG--AGG 127
              +     Q     L+  +   +             L   + D ND  LEV +G   GG
Sbjct: 138 KSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLLPKEKYDKNDVILEVTSGRTTGG 197

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G + Y  LK E G+
Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 257

Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           HR+ RI     +SR     + +   +     D +++++   D RIDT+RA GAGGQHVNT
Sbjct: 258 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHVNT 317

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+ HIPTG+VV+CQQERSQ KNK  A+ +LRA+LY+  ++K  +      + K +
Sbjct: 318 TDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEK--DKCQQRSARKLQ 375

Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351
           +G      +IR+Y       V D R   E     + L G   LD  ++  L
Sbjct: 376 VGTRAQSERIRTYNF-TQDRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLL 425


>gi|67969776|dbj|BAE01236.1| unnamed protein product [Macaca fascicularis]
          Length = 378

 Score =  152 bits (383), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 102/351 (29%), Positives = 157/351 (44%), Gaps = 21/351 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +N  +    L    +   +  N    + L R    L    +  +EIQ+       L  + 
Sbjct: 13  ENLNKEYQTLEQCLQHIPV--NEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMC 70

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFES-------LLSGEADSNDAYLEVHAG--AGG 127
              +     Q     L+  +   +             L   + D ND  LEV +G   GG
Sbjct: 71  KSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLLPKEKYDKNDVILEVTSGRTTGG 130

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G + Y  LK E G+
Sbjct: 131 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 190

Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           HR+ RI     +SR     + +   +     D +++++   D RIDT+RA GAGGQHVNT
Sbjct: 191 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHVNT 250

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T SAVR+ HIPTG+VV+CQQERSQ KNK  A+ +LRA+LY+  ++K  +      + K +
Sbjct: 251 TVSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEK--DKCQQQSARKLQ 308

Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351
           +G      +IR+Y       V D R   E     + L G   LD  ++  L
Sbjct: 309 VGTRAQSERIRTYNF-TQDRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLL 358


>gi|310796023|gb|EFQ31484.1| RF-1 domain-containing protein [Glomerella graminicola M1.001]
          Length = 397

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 91/342 (26%), Positives = 151/342 (44%), Gaps = 32/342 (9%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
               R    L + ++ ++E +        L  L   +D         +            
Sbjct: 35  TKTARRLGELSSVVTALREWEQATSSVAELNGLLGSKDKELRDMAAEELESTRDQLAAVS 94

Query: 103 QFES---LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
           +  S               LE+  G GG E + +A+ L RMY ++  ++ ++ E ++   
Sbjct: 95  RRLSASLTPKDPYAHMPCLLEIRPGPGGLEGRFFADTLFRMYKQYCSRKGYRAEVIKYET 154

Query: 160 GEEAG----------IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
            + AG          ++ A + I  P AY   +GE G+HR+ RI   + N R HTS  ++
Sbjct: 155 ADAAGDQSTAAGESPLQEAIVEIHDPGAYDLFRGEAGMHRVQRIPATEKNGRVHTSAVAV 214

Query: 210 WVYP-------------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           WV P             + +   +  I  ++ +I+T RA GAGGQHVN T+SA+R+TH+P
Sbjct: 215 WVLPSFQESGGEGGAQDMDNPESDFYIDPAEVKIETMRARGAGGQHVNKTESAIRMTHVP 274

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES---SKTEIGWGRQIR 313
           TG VV  Q  RSQ +N+  AW ++R+++  +  + REE A        S+  I    +IR
Sbjct: 275 TGTVVSMQDSRSQSRNREDAWKLMRSRVALIRREAREEAAAQLRDSVLSQHRISRSDKIR 334

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATLAI 353
           +Y       V D R  ++  +  DV++G   LD  + A    
Sbjct: 335 TYNYN-QDRVTDHRAGLDVYNLDDVINGGESLDKIVDAVRDW 375


>gi|302820744|ref|XP_002992038.1| hypothetical protein SELMODRAFT_430253 [Selaginella moellendorffii]
 gi|300140160|gb|EFJ06887.1| hypothetical protein SELMODRAFT_430253 [Selaginella moellendorffii]
          Length = 654

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 82/197 (41%), Positives = 121/197 (61%), Gaps = 4/197 (2%)

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS 218
            GEEAGIKSATL I G  AYG++ GE+G HRLVR  P++S   R TSF+ + V  V    
Sbjct: 118 PGEEAGIKSATLEIDGRYAYGYISGEKGTHRLVRQLPFNSKGLRQTSFAGVEVMHVRTKL 177

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
              +  ++       R+ G GGQ+VN  ++AVR+THIPTG+ ++C ++RSQ +NK +A  
Sbjct: 178 NSTQPGQATL----CRSGGKGGQNVNMVETAVRVTHIPTGIALRCSEKRSQLQNKIKAIV 233

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           +L++KL  +   +R            +  WG+QIR+YV  PY++V DLRTN+E +  S +
Sbjct: 234 LLKSKLLVILEDQRAAEIKEIRGDVVKAEWGQQIRNYVFHPYKLVMDLRTNVETSDISGI 293

Query: 339 LDGDLDDFMKATLAIKK 355
           +DG L+  + A L  K+
Sbjct: 294 MDGKLEPLLTAYLMSKQ 310



 Score = 44.4 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           DLRTN E +  S ++ G+L+  + A L  K+
Sbjct: 81  DLRTNTETSDISVIMGGNLEPLLTAYLMSKQ 111


>gi|3328106|gb|AAD12759.1| translational release factor 1 [Homo sapiens]
          Length = 445

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 101/351 (28%), Positives = 155/351 (44%), Gaps = 21/351 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +N  +    L    +   +  N    + L R    L    +  +E Q+       L  + 
Sbjct: 80  ENLSKEYQTLEQCLQHIPV--NEESRRSLNRRHAELAPLAAIYQETQETEQAIEELGSMC 137

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFES-------LLSGEADSNDAYLEVHAG--AGG 127
              +     Q     L+  +   +             +   + D ND  LEV AG   GG
Sbjct: 138 KSLNKRDEKQLLELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 197

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G   Y  LK E G+
Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFEPLNYTPADYGGLHHAAARISGDGVYKHLKYEGGI 257

Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           HR+ RI     +SR     + +   +     D +++++   D RIDT+RA GAGGQHVN 
Sbjct: 258 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHVNK 317

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+ HIPTG+VV+CQQERSQ KNK  A+ +LRA+LY+  ++K  +      + K +
Sbjct: 318 TDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEK--DKRQQQSARKLQ 375

Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351
           +G      +IR+Y       V D R   E     + L G   LD  ++  L
Sbjct: 376 VGTRAQSERIRTYNF-TQDRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLL 425


>gi|149237364|ref|XP_001524559.1| peptide chain release factor 1, mitochondrial precursor
           [Lodderomyces elongisporus NRRL YB-4239]
 gi|146452094|gb|EDK46350.1| peptide chain release factor 1, mitochondrial precursor
           [Lodderomyces elongisporus NRRL YB-4239]
          Length = 392

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 86/303 (28%), Positives = 141/303 (46%), Gaps = 10/303 (3%)

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
            +    E    L +   L  +   +      +E  + + +    +E    + L   +   
Sbjct: 70  VLKTYDEFSRILLEIRELSTIRDPDLISEAQEELQELVPKYTSIIEELNNKLLPPVKYAE 129

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
               +E+  G GG E+  + + L++MY  +A  + +    +         +    L I  
Sbjct: 130 CGCMIELRPGVGGNEASLFTDDLMQMYLNFASIQSWPALVISRSTNSSGFVNEIILSINQ 189

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD-------DSIEIEISESD 227
           P AY  L+ E GVHR+ RI   ++  R HTS S++ + P +         + E++    +
Sbjct: 190 PGAYDVLRHESGVHRVQRIPETENKGRVHTSTSAVIILPKMSDGNENSLRADEMQFKPGE 249

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            RIDT RA G GGQHVNTTDSAVR+ HIPTG++V  Q ERSQ +NKA+A+ +LRA+L E 
Sbjct: 250 VRIDTMRAGGKGGQHVNTTDSAVRLVHIPTGIMVMQQDERSQPQNKAKAFAILRARLAEK 309

Query: 288 EL-QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDD 345
           E  ++      +  S  +      +IR+Y   P   V D R        +  + G+ L++
Sbjct: 310 ERVEELNRQRQMRTSQVSSTDRSDKIRTYNY-PQNRVTDHRCGFSLHDIAGCMGGNKLNE 368

Query: 346 FMK 348
            + 
Sbjct: 369 IID 371


>gi|302653122|ref|XP_003018392.1| hypothetical protein TRV_07586 [Trichophyton verrucosum HKI 0517]
 gi|291182035|gb|EFE37747.1| hypothetical protein TRV_07586 [Trichophyton verrucosum HKI 0517]
          Length = 438

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 86/341 (25%), Positives = 153/341 (44%), Gaps = 31/341 (9%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           +   +    +    + +K+          L  L  E    + L+  +++     +     
Sbjct: 71  RAAAKRIGEIAPVANALKDWDTAHESITELQGLIDEPSTDTELKSLAEDDITTTIGTLSS 130

Query: 103 -----QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
                +   +           +E+  GAGG E+  +A  +LRMYT +   R  +T  +++
Sbjct: 131 LSATLKRALIPRHPFADMPCLIEIRPGAGGDEAGLFAAEMLRMYTSFCSSRGLRTTIIKM 190

Query: 158 HDGEEAG------IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
              +  G      +    + ++ P +Y  L+ E GVHR+ R+   ++  R HTS  S+ +
Sbjct: 191 EAEDGVGAGAEERLSEVVMEVETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMI 250

Query: 212 YP-------------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
            P               D + +  ++  D + + +RASGAGGQHVN T+SAVR+THIPTG
Sbjct: 251 LPSFPENNQEDSPLNFDDPNSDYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHIPTG 310

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRS 314
            V+  Q  RSQH+N+ +AW +LRAKL +   + RE+              + G G +IR+
Sbjct: 311 TVISMQDSRSQHENRRKAWLLLRAKLAQARREAREQEMMELRRGAMGGVNKTGRGDKIRT 370

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
           Y         D R+ +   +   V+DG  +L+  +++  + 
Sbjct: 371 YNF-TQSRCTDHRSGMTVHNIGKVMDGGENLEKIIESVQSW 410


>gi|302901381|ref|XP_003048424.1| hypothetical protein NECHADRAFT_84223 [Nectria haematococca mpVI
           77-13-4]
 gi|256729357|gb|EEU42711.1| hypothetical protein NECHADRAFT_84223 [Nectria haematococca mpVI
           77-13-4]
          Length = 412

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 96/360 (26%), Positives = 161/360 (44%), Gaps = 33/360 (9%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
            +       L  KT +     +  +AK +  E   +  A+   ++ Q  + +   +L   
Sbjct: 29  QSMTSEYDEL-QKTLNASF--DSTKAKRVG-ELSRVAEALKAWEKSQASVAELTAMLNDP 84

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN--DAYLEVHAGAGGTESQDWA 134
            ++ D   +       +  KLE   +   + L+           +E   G GG E + + 
Sbjct: 85  EQDADLVSIARDELESETGKLESLARNLSASLTPRHPFADFPCMIEFRPGPGGLEGRYFT 144

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAG----------IKSATLLIKGPNAYGWLKGE 184
           + L +MY     ++ ++   ++    + AG          ++ A L I+   A+   + E
Sbjct: 145 DTLFKMYKALCMRKGYRHSVMKYEFADTAGDSSSSAGENPLQEAVLEIQDQGAFDLFRSE 204

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYP-----------VVDDSIEIEISESDCRIDTY 233
            G+HR+ RI   +S  R HTS  ++WV P             D   +  ++  D +I+  
Sbjct: 205 AGMHRVQRIPSTESKGRVHTSAVAVWVLPSFPESGAGSVDFEDPESDFYVNPQDVKIEAM 264

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           RA GAGGQHVN T+SA+R+TH+PTG  V  Q  RSQ +N+ +AW M+RA++ +   + RE
Sbjct: 265 RARGAGGQHVNKTESAIRMTHLPTGTTVSMQDHRSQQRNRDEAWKMMRARIADQRREARE 324

Query: 294 EIANIGES---SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMK 348
           E A    +   SKT+I  G +IR+Y         D R  I+     +VL+G   LD  M 
Sbjct: 325 EEAARLRNSVLSKTQITRGDKIRTYNYN-QDRCTDHRAGIDVHDLPNVLEGGEKLDRIMD 383


>gi|255945217|ref|XP_002563376.1| Pc20g08530 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211588111|emb|CAP86182.1| Pc20g08530 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 423

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 93/338 (27%), Positives = 143/338 (42%), Gaps = 29/338 (8%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK-----LE 98
              +    L    + +KE  +     + L  L  + +  + L+  +              
Sbjct: 67  KTAKRAGELAPVANILKEWVNANDSIVELNSLLTDPNTDAELRSLATEDLESSRDALPSI 126

Query: 99  VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT---EAL 155
            +  +   +           LE+  GAGG E+  +A  +LRMY  +  +R  +    +  
Sbjct: 127 SDRLKKALIPRHPFADLPCLLEIRPGAGGDEAGLFAFEMLRMYVAFCSRRGLRPTILKQD 186

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-- 213
                 E  +  A + I+   AY  L+ E GVHR+ R+   ++  R HTS  S+ V P  
Sbjct: 187 TEVGPSEDRLSEAVIEIQANGAYDILRTESGVHRVQRVPATETKGRTHTSAVSVMVLPSF 246

Query: 214 ------------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
                         D S +  I   + R++  RA GAGGQHVN T+SA+R+THIPT  VV
Sbjct: 247 PEDTSEMDNALNFEDPSSDYYIDPQEVRVEKMRAGGAGGQHVNKTESAIRLTHIPTNTVV 306

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRSYVL 317
             Q ERSQ  N+ +AW +LRAKL E   + RE+              ++G G +IR+Y  
Sbjct: 307 SMQDERSQQANRRKAWQVLRAKLAEARQEAREQELMQLRRGILGGVAKMGRGDKIRTYNF 366

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
                  D RT I   +   +LDG   L+  M +    
Sbjct: 367 G-QSRCTDHRTGITIHNLDGILDGGDGLETVMDSVRTW 403


>gi|323445681|gb|EGB02173.1| hypothetical protein AURANDRAFT_35500 [Aureococcus anophagefferens]
          Length = 268

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 106/259 (40%), Positives = 150/259 (57%), Gaps = 9/259 (3%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           + E+ ++G  D  D  LE+ AGAGG ++Q+W  M+ RMY R+ EKR F     E  +G+ 
Sbjct: 1   ELEAAMTGPYDGCDCRLEITAGAGGLDAQEWTAMVARMYARFGEKRGFSVVEAERSEGDH 60

Query: 163 AGIKSAT-LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
            G      L I+G NA+G  +GE+G HRLVR SP++S ++R TSF+S+   P + D    
Sbjct: 61  PGCVKGVSLEIRGANAFGLFRGEKGAHRLVRQSPFNSAAKRQTSFASVEPTPDLPDDHPD 120

Query: 222 EI------SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
                     +D  + T RA GAGGQ+VN  ++AVR+TH+PTG+ V+C +ER+Q  NKA 
Sbjct: 121 LPADVAELDPADLEVTTARAGGAGGQNVNKVETAVRMTHVPTGLRVRCARERTQGANKAI 180

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A  MLRAKL     ++R          +    +G  +RSYVL PY++VKD     E    
Sbjct: 181 ALTMLRAKLVAAMAEQRAATLADIRGDRVAADFGASVRSYVLHPYKLVKD--DKHETPHA 238

Query: 336 SDVLDGDLDDFMKATLAIK 354
           +DVLDGDL  F+ A L  +
Sbjct: 239 TDVLDGDLGPFLDAELRRR 257


>gi|196013797|ref|XP_002116759.1| hypothetical protein TRIADDRAFT_31311 [Trichoplax adhaerens]
 gi|190580737|gb|EDV20818.1| hypothetical protein TRIADDRAFT_31311 [Trichoplax adhaerens]
          Length = 271

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 101/248 (40%), Positives = 154/248 (62%), Gaps = 9/248 (3%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
           + EAD ++A +E+ A  GG E+  +A  L +MY R+A  R +K EAL  H+ E  G K A
Sbjct: 4   NDEADDSNAIIEIRAATGGLEAALFAADLFQMYKRYASHRNWKFEALSFHENEVGGFKEA 63

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
              I G   +G +K E GVHR+ R+   +S+ R HTS +++ + P   + I+I I+++D 
Sbjct: 64  IASIVGAGVFGEMKLESGVHRVQRVPITESDGRVHTSTATVAILP-QPEEIDIVINKNDI 122

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           + DT+RA GAGGQHVNTTDSAVR+THIPTG++V  Q+E+SQH+NKA+A  +L+AKL++  
Sbjct: 123 KFDTFRAQGAGGQHVNTTDSAVRLTHIPTGMIVAVQEEKSQHRNKAKAIQILQAKLFD-- 180

Query: 289 LQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--L 343
            Q+++   +   + + +IG G    +IR+Y  Q    + D R N+      D L G+  L
Sbjct: 181 EQRQQNQTDRVHARRQQIGTGARSERIRTYNYQ-QDRITDHRINMSLYGIDDFLSGNESL 239

Query: 344 DDFMKATL 351
           +  M + L
Sbjct: 240 NHLMSSLL 247


>gi|58260798|ref|XP_567809.1| hypothetical protein CNK01240 [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134117261|ref|XP_772857.1| hypothetical protein CNBK2280 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255475|gb|EAL18210.1| hypothetical protein CNBK2280 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229890|gb|AAW46292.1| hypothetical protein CNK01240 [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 480

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 99/347 (28%), Positives = 155/347 (44%), Gaps = 21/347 (6%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           N  ++++    K  D  +   +  A+ + +E   L    +   E++  + +    LE + 
Sbjct: 114 NVYKKVTEDEAKATDIDIKSQIERAR-VQKELAPLVEVWNKYLELKQSIIEIKPFLEDSD 172

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQ-FESLLSGEADSNDAYLEVHAGAGGTESQDWANM 136
                    E +     +   +        L      +  A + ++AG GG ES      
Sbjct: 173 PTLRQMFEAEHASLGTELDALITSTLPIVLLPPLSTAALPAVMSLNAGVGGLESALCTED 232

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-----------AYGWLKGEQ 185
           L RMY R+A  R +K E +   +G           +                YG L+ E+
Sbjct: 233 LARMYLRFATNRGWKVEEISRVEGTGGKGGGGIRELTVKFEPPQYAEEGIEVYGALQWEK 292

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQHVN 244
           GVHR+ R+   ++  R HTS  ++ V P+  D+     +   D RID  RA GAGGQHVN
Sbjct: 293 GVHRIQRVPANETQGRIHTSTVAVIVLPMYPDTAEAPLVDPKDVRIDVMRARGAGGQHVN 352

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T+SAVR+THIPTG+ V  Q  RSQH+N+  AW +LRA+L   E +  EE+     S + 
Sbjct: 353 RTESAVRLTHIPTGITVSMQDSRSQHQNRTWAWEILRARLS--EKKHNEEVEARRASRRD 410

Query: 305 EI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFM 347
           ++       +IR+Y       + D R  I  T    VLDG+ L+D +
Sbjct: 411 QVKGADRSDKIRTYNFN-QDRLTDHRFGITVTGLQHVLDGEGLEDVI 456


>gi|303310501|ref|XP_003065262.1| Peptidyl-tRNA hydrolase domain containing protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240104924|gb|EER23117.1| Peptidyl-tRNA hydrolase domain containing protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|320034924|gb|EFW16867.1| peptide chain release factor 1 [Coccidioides posadasii str.
           Silveira]
          Length = 438

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 92/340 (27%), Positives = 151/340 (44%), Gaps = 30/340 (8%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI-----KL 97
           K   +    L   +  +KE          L  L  +      L+E + +  +        
Sbjct: 68  KETAKRVGELTATVQALKEWDKAHESIAELNHLLDDPSSDPELRELASDDLQTTVSSLFA 127

Query: 98  EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
                +   +           +E+  GAGG E+  +A+ LLRMY  +  +   +T  L+ 
Sbjct: 128 LSGKLKESLIPRHPFAELPCLVEIRPGAGGDEAGLFASELLRMYLAFCSRHGLRTAILKK 187

Query: 158 HDGEEAG-------IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
              + AG       +  A + I+ P +Y  L+ E GVHR+ RI   ++  R HTS  S+ 
Sbjct: 188 DVEDGAGGSGSEDRLSEAVMEIEAPGSYNILRTEAGVHRVQRIPATEAKGRVHTSAVSVM 247

Query: 211 VYP-----------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
           + P             D + +  I+  D + +  RASGAGGQHVN T+SA+R+TH+PT  
Sbjct: 248 ILPSFSEQNDSALNFDDPNSDYYINPQDVQSEKMRASGAGGQHVNKTESAIRLTHVPTST 307

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRSY 315
           VV  Q  RSQH+N+ +AW +LR+K+ ++  + RE+               +G G ++R+Y
Sbjct: 308 VVAVQDSRSQHENRRKAWRLLRSKIAQMRREAREQELVELRRGIMGGVARMGRGDKVRTY 367

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
                    D R+ +   +   VLDG   LD+ M++    
Sbjct: 368 NFG-QNRCTDHRSGVTIHNLGSVLDGGEGLDNIMESVSNW 406


>gi|255721217|ref|XP_002545543.1| peptide chain release factor 1, mitochondrial precursor [Candida
           tropicalis MYA-3404]
 gi|240136032|gb|EER35585.1| peptide chain release factor 1, mitochondrial precursor [Candida
           tropicalis MYA-3404]
          Length = 390

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 87/344 (25%), Positives = 149/344 (43%), Gaps = 18/344 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           ++  +    L+ K  +     +      L  +  +  N +    ++     +   L+ + 
Sbjct: 52  ESIRKEHKELSEKLSN-DYIPD------LQVKYDNYTNILGLYDKLNTYRSEYQELVNIT 104

Query: 77  LEED-DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
            + D      +E       ++  V     +     +       +E+  G GG E+  +  
Sbjct: 105 DDPDLRKEAQEELETIAPEVEKLVSQLSVKLRPPVKYAEKGCMIELRPGVGGNEASLFTG 164

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
            LL MY  +A +  +K++ +         +  A L I    +Y  ++ E GVHR+ RI  
Sbjct: 165 DLLNMYMGFASEMNWKSKIISEGRNASGFLNEAILCIDTLGSYDIMRHESGVHRVQRIPE 224

Query: 196 YDSNSRRHTSFSSIWVYPVVDD-------SIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
            ++  R HTS +++ V P + +         E   +  + RIDT RASG GGQHVNTTDS
Sbjct: 225 TETKGRVHTSTAAVVVLPKLSEGNESSLKEDERVFAPGEVRIDTMRASGKGGQHVNTTDS 284

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIG 307
           AVR+ HIPTG++V  Q ERSQ  NKA+A+ +LR++L + E ++           + +   
Sbjct: 285 AVRLVHIPTGMIVYQQDERSQPMNKAKAFAVLRSRLAQKEQEEEMIRQKNLRLDQVSSTD 344

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKAT 350
              +I++Y  +    V D R N        VL G  L   +   
Sbjct: 345 RSDKIKTYNFK-ENRVTDHRVNYSMHDLQGVLSGRKLGQLIDVY 387


>gi|119195451|ref|XP_001248329.1| peptide chain release factor 1, mitochondrial precursor (MRF-1)
           [Coccidioides immitis RS]
          Length = 438

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 92/340 (27%), Positives = 151/340 (44%), Gaps = 30/340 (8%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI-----KL 97
           K   +    L   +  +KE          L  L  +      L+E + +  +        
Sbjct: 68  KETAKRVGELTATVQALKEWDKAHESIAELNHLLDDPSSDPELRELASDDLQTTVSSLFA 127

Query: 98  EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
                +   +           +E+  GAGG E+  +A+ LLRMY  +  +   +T  L+ 
Sbjct: 128 LSGKLKESLIPRHPFAELPCLVEIRPGAGGDEAGLFASELLRMYLAFCSRHGLRTAILKK 187

Query: 158 HDGEEAG-------IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
              + AG       +  A + I+ P +Y  L+ E GVHR+ RI   ++  R HTS  S+ 
Sbjct: 188 DVEDGAGGSGSEDRLSEAVMEIEAPGSYNILRTEAGVHRVQRIPATEAKGRVHTSAVSVM 247

Query: 211 VYP-----------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
           + P             D + +  I+  D + +  RASGAGGQHVN T+SA+R+TH+PT  
Sbjct: 248 ILPSFSEQNDSALNFDDPNSDYYINPQDVQSEKMRASGAGGQHVNKTESAIRLTHVPTST 307

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRSY 315
           VV  Q  RSQH+N+ +AW +LR+K+ ++  + RE+               +G G ++R+Y
Sbjct: 308 VVAVQDSRSQHENRRKAWRLLRSKIAQMRREAREQELVELRRGIMGGVARMGRGDKVRTY 367

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
                    D R+ +   +   VLDG   LD+ M++    
Sbjct: 368 NFG-QNRCTDHRSGVTIHNLGSVLDGGEGLDNIMESVSNW 406


>gi|213026460|ref|ZP_03340907.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 201

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 84/202 (41%), Positives = 124/202 (61%), Gaps = 6/202 (2%)

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           E R+++ E + + +GE  G K     I G   YG LK E G HR+ R+   +S  R HTS
Sbjct: 1   EARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTS 60

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
             ++ V P + ++   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ 
Sbjct: 61  ACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQD 120

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQM 322
           ERSQHKNKA+A ++L A+++  E  KR++      + +  +G G    + R+Y   P   
Sbjct: 121 ERSQHKNKAKALSVLGARIHAAETAKRQQ--AEASTRRNLLGSGDRSDRNRTYNF-PQGR 177

Query: 323 VKDLRTNIEKTSPSDVLDGDLD 344
           V D R N+      + ++G LD
Sbjct: 178 VTDHRINLTLYRLDETMEGKLD 199


>gi|149192359|ref|ZP_01870562.1| peptide chain release factor 1 [Vibrio shilonii AK1]
 gi|148833798|gb|EDL50832.1| peptide chain release factor 1 [Vibrio shilonii AK1]
          Length = 229

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 89/221 (40%), Positives = 135/221 (61%), Gaps = 6/221 (2%)

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
            RMY+++AEK+ ++ E +  ++ E+ G K     + G  AYG LK E G HR+ R+   +
Sbjct: 1   FRMYSKYAEKKGWRIEVMSSNESEQGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPATE 60

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           S  R HTS  ++ V   + ++   EI  +D +IDT+RASGAGGQHVNTTDSA+RITH+PT
Sbjct: 61  SQGRVHTSACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHLPT 120

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314
           G VV+CQ ERSQHKNKA+A ++L A+   +  ++ +  A + ++ +  +G G    +IR+
Sbjct: 121 GTVVECQDERSQHKNKAKAMSVLAAR--IIAAEEAKRAAEVSDTRRNLLGSGDRSDRIRT 178

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           Y   P   V D R N+     S+V++GDL   +   L   +
Sbjct: 179 YNY-PQGRVSDHRINLTLYRLSEVMEGDLQSLVDPVLQEHQ 218


>gi|170070084|ref|XP_001869460.1| peptide chain release factor 1 [Culex quinquefasciatus]
 gi|167866004|gb|EDS29387.1| peptide chain release factor 1 [Culex quinquefasciatus]
          Length = 425

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 105/352 (29%), Positives = 170/352 (48%), Gaps = 27/352 (7%)

Query: 16  WDNAVQRLSFLN--TKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            +N       L    +     +           +    L + +   ++ +  + +   L 
Sbjct: 74  LENIRLEYYSLKVLEQMNKQDI-----------KRMALLSHVVEMYEQRRIIVDNLSSLA 122

Query: 74  ELA-LEEDDCSILQETSDNLQRIKLEVEYKQFES---LLSGEADSNDAYLEVHAGAGGTE 129
           E+   +++D   L +         L     +       +  E D +   LEV AG GG E
Sbjct: 123 EMGAEKDEDMLQLMKEEKEAYTNILRKLDGEIMDGILSMDEEEDYSSLILEVAAGVGGQE 182

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHR 189
           +  +A  +  MY  + E + ++ E L+  D E  GI+ A+++I G +AY +LK E GVHR
Sbjct: 183 AMLFAREVFDMYCGFVEFKGWEIEMLQTEDTELGGIRHASMVINGRDAYRFLKFEAGVHR 242

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + RI   + ++R HTS +++ V P  D+  +IE+ + D +I+T RASGAGGQHVNTTDSA
Sbjct: 243 VQRIPSTEKSARIHTSTATVSVLPRPDEF-QIELKDKDLKIETKRASGAGGQHVNTTDSA 301

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
           VRI H+PTG+ V+CQ ERSQ KNK  A   L AKL + EL+ +       +  K+++G  
Sbjct: 302 VRIVHLPTGMAVECQTERSQGKNKEIAKQKLLAKLTQQELESKFNAKQSLK--KSQVGSS 359

Query: 310 ---RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGD--LDDFMKATLAIKK 355
               +IR+Y   P   + D R       +    ++G   L D ++      +
Sbjct: 360 TRNEKIRTYNY-PQDRITDHRLEGGTTHNLKVFMEGGPPLGDMVEKLRKDHR 410


>gi|194377328|dbj|BAG57612.1| unnamed protein product [Homo sapiens]
          Length = 468

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 97/335 (28%), Positives = 148/335 (44%), Gaps = 19/335 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +N  +    L    +   +  N    + L R    L    +  +EIQ+       L  + 
Sbjct: 93  ENLSKEYQTLEQCLQHIPV--NEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMC 150

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFES-------LLSGEADSNDAYLEVHAG--AGG 127
              +     Q     L+  +   +             +   + D ND  LEV AG   GG
Sbjct: 151 KSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 210

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G   Y  LK E G+
Sbjct: 211 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGI 270

Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           HR+ RI     +SR     + +   +     D +++++   D RIDT+RA GAGGQHVN 
Sbjct: 271 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHVNK 330

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+ HIPTG+VV+CQQERSQ KNK  A+ +LRA+LY+  ++K  +      + K +
Sbjct: 331 TDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEK--DKRQQQSARKLQ 388

Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           +G      +IR+Y       V D R   E      
Sbjct: 389 VGTRAQSERIRTYNF-TQDRVSDHRIAYEVRDIKA 422


>gi|26346685|dbj|BAC36991.1| unnamed protein product [Mus musculus]
          Length = 446

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 100/351 (28%), Positives = 159/351 (45%), Gaps = 21/351 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           ++  +    L+   +   + +N  + + L R    L    +  +EIQ+       L  L 
Sbjct: 81  EDLNKEYQTLDQCLQ--GISENEGDRRALHRRHAQLAPLAAVYQEIQEAEQAIEELESLC 138

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFES-------LLSGEADSNDAYLEVHAG--AGG 127
              +     Q      +  ++  +             +   + D +D  LEV +G   GG
Sbjct: 139 KSLNKQDEKQLQELVSEERQIIDQKIHRLYSELLERLVPKEKYDWSDVILEVTSGRTTGG 198

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + +K E L     +  G+  A   I G + Y  LK E G+
Sbjct: 199 DICQQFTREIFDMYQNYSYYKHWKFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 258

Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           HR+ RI     +SR     + +   +     D +++++   D R+DT+RA GAGGQHVNT
Sbjct: 259 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKVDPKDLRVDTFRARGAGGQHVNT 318

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+ HIPTG+VV+CQQERSQ KNK  A  +LRA+LY+  ++K           K +
Sbjct: 319 TDSAVRLVHIPTGLVVECQQERSQLKNKEIALRVLRARLYQQIIEKDRCQQQNA--RKLQ 376

Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351
           +G      +IR+Y       V D R   E     + L G+  LD  ++  L
Sbjct: 377 VGTRAQSERIRTYNF-TQDRVTDPRIAYEVRDIKEFLRGEKCLDQLIERLL 426


>gi|321264047|ref|XP_003196741.1| peptide chain release factor 1, mitochondrial precursor
           [Cryptococcus gattii WM276]
 gi|317463218|gb|ADV24954.1| Peptide chain release factor 1, mitochondrial precursor, putative
           [Cryptococcus gattii WM276]
          Length = 476

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 102/347 (29%), Positives = 158/347 (45%), Gaps = 21/347 (6%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           N  +++     K  D  +   +  A+ + +E   L    +   E++  + D    LE + 
Sbjct: 110 NVYKKVMENEAKATDIDVKGQIERAR-VQKELAPLLEVWNRYLELKQSIIDMKPFLEDSD 168

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN-DAYLEVHAGAGGTESQDWANM 136
                    E +     +   +       LL   + ++  A + ++AG GG ES      
Sbjct: 169 PTLREMFETEHASLCTELDTLIISTFPTVLLPPSSTASLPAVMSLNAGVGGLESALCTED 228

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN-----------AYGWLKGEQ 185
           L RMY R+A  R +K E +   +G           +                YG L+ E+
Sbjct: 229 LARMYLRFATNRGWKVEEISRVEGTGGKGGGGIRELTVKFEPPQYAEEGTEVYGALQWEK 288

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-IEIEISESDCRIDTYRASGAGGQHVN 244
           GVHR+ R+   ++  R HTS  ++ V P+  D+     +   D RID  RA GAGGQHVN
Sbjct: 289 GVHRIQRVPANETQGRIHTSTVAVIVLPMYPDTAEAPLVDPKDVRIDVMRARGAGGQHVN 348

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
            T+SAVR+THIPTG+ V  Q  RSQH+N+A AW +LRA+L   E +  EE+     S + 
Sbjct: 349 RTESAVRLTHIPTGITVSMQDSRSQHQNRAWAWEILRARLS--EKKHNEEVEARRASRRD 406

Query: 305 EI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFM 347
           ++       +IR+Y       + D R  I  T    VLDG+ L+D +
Sbjct: 407 QVKGADRSDKIRTYNFN-QDRLTDHRFGITVTGLQRVLDGEGLEDVI 452


>gi|300176358|emb|CBK23669.2| unnamed protein product [Blastocystis hominis]
          Length = 244

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 97/220 (44%), Positives = 141/220 (64%), Gaps = 2/220 (0%)

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
           MLL MYT +A+K  +K + +   D  ++   S+ L ++G +   +L  E GVHRLVRISP
Sbjct: 1   MLLAMYTSFAQKMNWKCKLISKLDDGDS-CHSSILKLEGDDLASYLSLESGVHRLVRISP 59

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           +D N RRHTSF+S+ V PV + +  + I  ++ +ID +R+SG GGQHVN T+SAVR+TH+
Sbjct: 60  FDKNQRRHTSFASVSVSPVPEAASSLRILPTELQIDRFRSSGPGGQHVNKTESAVRVTHL 119

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315
           P+G+V +CQ ER+QH+N   A  M+++KL   E +K  E      + K    W  QIRSY
Sbjct: 120 PSGIVAECQAERNQHQNLEIAMEMVKSKLLLREAEKEAEKKQEDHARKDVNAWSSQIRSY 179

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           VL PY+MVKD R  +E+     +L GDL  F++  +A +K
Sbjct: 180 VLHPYKMVKDHRFGVEEGDVEKILGGDLKGFVEE-IARRK 218


>gi|331657262|ref|ZP_08358224.1| peptide chain release factor 1 [Escherichia coli TA206]
 gi|331055510|gb|EGI27519.1| peptide chain release factor 1 [Escherichia coli TA206]
          Length = 323

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 86/271 (31%), Positives = 132/271 (48%), Gaps = 7/271 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+      ++ +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +S  R HTS  ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH
Sbjct: 189 ATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITH 248

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           +PTG+++  +       N       L+  LY
Sbjct: 249 LPTGLLLNVRT------NVHNIKTKLKHFLY 273


>gi|302496498|ref|XP_003010250.1| hypothetical protein ARB_03505 [Arthroderma benhamiae CBS 112371]
 gi|291173792|gb|EFE29610.1| hypothetical protein ARB_03505 [Arthroderma benhamiae CBS 112371]
          Length = 438

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 87/341 (25%), Positives = 153/341 (44%), Gaps = 31/341 (9%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           +   +    +    + +K+          L  L  E    + L+  +++     +     
Sbjct: 71  RAAAKRIGEIAPVANALKDWDTAHESITELQGLIDEPSTDTELKSLAEDDITTTIGTLSS 130

Query: 103 -----QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
                +   +           +E+  GAGG E+  +A  +LRMYT +   R  +T  +++
Sbjct: 131 LSATLKRALIPRHPFADMPCLIEIRPGAGGDEAGLFAAEMLRMYTSFCSSRGLRTTIIKM 190

Query: 158 HDGEEAG------IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
              +  G      +    + ++ P +Y  L+ E GVHR+ R+   ++  R HTS  S+ +
Sbjct: 191 EAEDGVGAGAEERLSEVVMEVETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMI 250

Query: 212 YP-------------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
            P               D + +  ++  D + + +RASGAGGQHVN T+SAVR+THIPTG
Sbjct: 251 LPSFPESNQEDSPLNFDDPNSDYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHIPTG 310

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRS 314
            V+  Q  RSQH+N+ +AW +LRAKL +   + RE+              + G G +IR+
Sbjct: 311 TVISMQDSRSQHENRRKAWLLLRAKLAQARREAREQEMMELRRGAMGGVNKTGRGDKIRT 370

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
           Y         D R+ +   +   V+DG  +L+  M++  + 
Sbjct: 371 YNF-TQSRCTDHRSGMTVHNIGKVMDGGENLEKIMESVQSW 410


>gi|195031191|ref|XP_001988305.1| GH11092 [Drosophila grimshawi]
 gi|193904305|gb|EDW03172.1| GH11092 [Drosophila grimshawi]
          Length = 395

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 107/320 (33%), Positives = 159/320 (49%), Gaps = 16/320 (5%)

Query: 48  ERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR----IKLEVEYKQ 103
               LD  ++ +++ +    +     ELA E+D+        +N        K E +  Q
Sbjct: 58  RLSRLDPVVNSLEKHRALQRNITPKQELAAEKDEDMRALMQEENNVYADLLRKQEEDMLQ 117

Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
               L+   D      EV AGAGG E+  +A  L  MYT + E   ++ E       +  
Sbjct: 118 ELLTLADNVDYPALIFEVKAGAGGQEAMLFAQELYDMYTSYFEHMGWEYEEFAYETTDIG 177

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G++ A LL+  P AY WL+ E GVHR+ R+   + + R HTS +SI V P     + + +
Sbjct: 178 GLRHANLLVSDPEAYNWLRYEAGVHRVQRVPTTEKSGRMHTSTASITVIP-RPADVHVHL 236

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           ++ D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+CQ ERSQ KN+  A   L+AK
Sbjct: 237 TDRDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVECQSERSQLKNRELALKRLQAK 296

Query: 284 LYELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRT--NIEKTSPSDV 338
           L + +L+     A+   + K++ G      +IR+Y       V D R        + S  
Sbjct: 297 LMQQQLE--SAEASKQATRKSQQGNLNRNEKIRTYNFM-QDRVTDHRVQQGGTLHNLSGF 353

Query: 339 LDG--DLDDFMKAT-LAIKK 355
           L G   L   ++   L  +K
Sbjct: 354 LAGGQQLSVLIERLQLEQRK 373


>gi|327306561|ref|XP_003237972.1| peptide chain release factor 1 [Trichophyton rubrum CBS 118892]
 gi|326460970|gb|EGD86423.1| peptide chain release factor 1 [Trichophyton rubrum CBS 118892]
          Length = 438

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 87/341 (25%), Positives = 153/341 (44%), Gaps = 31/341 (9%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           +   +    +    + +K+          L  L  E    + L+  +++     +     
Sbjct: 71  RAAAKRIGEIAPVANALKDWDTAHESITELQGLIDEPSTDTELKSLAEDDITTTIGTLSS 130

Query: 103 -----QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
                +   +           +E+  GAGG E+  +A  +LRMYT +   R  +T  +++
Sbjct: 131 LSATLKRALIPRHPFADMPCLIEIRPGAGGDEAGLFAAEMLRMYTSFCSSRGLRTTIIKM 190

Query: 158 HDGEEAG------IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
              +  G      +    + ++ P +Y  L+ E GVHR+ R+   ++  R HTS  S+ +
Sbjct: 191 EAEDGVGAGAEERLSEVVMEVETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMI 250

Query: 212 YP-------------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
            P               D + +  ++  D + + +RASGAGGQHVN T+SAVR+THIPTG
Sbjct: 251 LPSFPENNQEDSPLNFDDPNSDYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHIPTG 310

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRS 314
            V+  Q  RSQH+N+ +AW +LRAKL +   + RE+              + G G +IR+
Sbjct: 311 TVISMQDSRSQHENRRKAWLLLRAKLAQARREAREQEMMELRRGAMGGVNKTGRGDKIRT 370

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
           Y         D R+ +   +   V+DG  +L+  M++  + 
Sbjct: 371 YNF-TQSRCTDHRSGMTVHNIGKVMDGGENLEKIMESVQSW 410


>gi|261188569|ref|XP_002620699.1| peptide chain release factor 1 [Ajellomyces dermatitidis SLH14081]
 gi|239593183|gb|EEQ75764.1| peptide chain release factor 1 [Ajellomyces dermatitidis SLH14081]
 gi|239613247|gb|EEQ90234.1| peptide chain release factor 1 [Ajellomyces dermatitidis ER-3]
          Length = 438

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 155/365 (42%), Gaps = 34/365 (9%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           +     + L +K  +     +   AK    E      A+   ++  + + +   LL+   
Sbjct: 51  SIANEHATLTSKLAE-TF--DPKTAKRAG-ELATTARALKKWEDANETIAELNNLLKDPS 106

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN--DAYLEVHAGAGGTESQDWAN 135
            + +   L           L +     +  L            LE+  GAGG E+  +AN
Sbjct: 107 TDSELHSLALEDLQSTTTSLAILSTNLKQALIPRHPFADLPCLLELRPGAGGEEAGIFAN 166

Query: 136 MLLRMYTRWAEKRKFKT---EALEIHDGEEAGIKSA----TLLIKGPNAYGWLKGEQGVH 188
            LLRMYT +   R       +    + G   G +       + I+ P +Y  L+ E GVH
Sbjct: 167 ELLRMYTMFCSNRGLHVTLLKKESENAGASGGSEDRLVEAVMEIETPGSYETLRTEAGVH 226

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYP--------------VVDDSIEIEISESDCRIDTYR 234
           R+ R+   +S  R HTS  S+ + P                D + +  I   +  ++  R
Sbjct: 227 RVQRVPATESKGRTHTSAVSVVILPSFPNNGEEGDSEMNFDDPNSDYYIDPQEVNVEKMR 286

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           A GAGGQHVN T+SA+R+THIPTG+VV  Q  RSQH+N+ +AW++LRA++ +   + REE
Sbjct: 287 AGGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWHLLRARIAQQRREAREE 346

Query: 295 IANIGE----SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMK 348
                         ++G G +IR+Y         D R+     +   +++G   L+  M 
Sbjct: 347 EMVKLRRGAMGGVGKMGRGDKIRTYNFG-QNRCTDHRSGFTVHNLGSIMEGGDGLEKIMD 405

Query: 349 ATLAI 353
           +    
Sbjct: 406 SVRGW 410


>gi|325190234|emb|CCA24711.1| peptide chain release factor putative [Albugo laibachii Nc14]
          Length = 372

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 119/314 (37%), Positives = 184/314 (58%), Gaps = 2/314 (0%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++  +L  +  + + +   +    L  ++     W N   A  + +    +++ +  +  
Sbjct: 55  QVKDKLAVIQNILETEKTTENTQRLREESSTLGFWGNAANAIAISQRLSAMESQLQRVSA 114

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            + +  +   L  L+  E D  +++E  + ++ I+  V+    E +LSG+ D    +LE+
Sbjct: 115 YRAQFLETKELYLLSEAEKDQEMMEECFETMESIRKAVQTLSMELMLSGKDDRLPCFLEI 174

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGGT+SQDW  ML +MY RWA+ +K+K + ++    E  G +S  L I G  AYGW+
Sbjct: 175 QAGAGGTDSQDWVAMLSKMYERWAQHKKYKVQYVDGLRTELGGFRSVCLRIDGDLAYGWI 234

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV--DDSIEIEISESDCRIDTYRASGAG 239
           K E GVHRL+R+SPYD   RRHTSF+ + VYP+   + +    +S  D RIDT+RA+G G
Sbjct: 235 KLEAGVHRLIRLSPYDQQKRRHTSFAQVRVYPIEAAEATTRTAVSGKDLRIDTFRATGPG 294

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQHVN+TDSAVRITH+P+G+VVQCQ ERSQH+NKAQA  +L AKL   E+ +++      
Sbjct: 295 GQHVNSTDSAVRITHLPSGIVVQCQSERSQHRNKAQAMEVLLAKLNNQEIAEQQSAKRQY 354

Query: 300 ESSKTEIGWGRQIR 313
                +  WG Q+R
Sbjct: 355 AKGLGDNAWGNQVR 368


>gi|114651379|ref|XP_001150035.1| PREDICTED: mitochondrial translational release factor 1 isoform 1
           [Pan troglodytes]
          Length = 455

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 97/335 (28%), Positives = 148/335 (44%), Gaps = 19/335 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +N  +    L    +   +  N    + L R    L    +  +EIQ+       L  + 
Sbjct: 80  ENLSKEYQTLEQCLQHIPV--NEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMC 137

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFES-------LLSGEADSNDAYLEVHAG--AGG 127
              +     Q     L+  +   +             +   + D ND  LEV AG   GG
Sbjct: 138 KSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 197

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G   Y  LK E G+
Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGI 257

Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           HR+ RI     +SR     + +   +     D +++++   D RIDT+RA GAGGQHVN 
Sbjct: 258 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHVNK 317

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+ HIPTG+VV+CQQERSQ KNK  A+ +LRA+LY+  ++K  +      + K +
Sbjct: 318 TDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLYQQIIEK--DKRQQQSARKLQ 375

Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSD 337
           +G      +IR+Y       V D R   E      
Sbjct: 376 VGTRAQSERIRTYNF-TQDRVSDHRIAYEVRDIKA 409


>gi|327357433|gb|EGE86290.1| peptide chain release factor 1 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 438

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 155/365 (42%), Gaps = 34/365 (9%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           +     + L +K  +     +   AK    E      A+   ++  + + +   LL+   
Sbjct: 51  SIANEHATLTSKLAE-TF--DPKTAKRAG-ELATTARALKKWEDANETIAELNNLLKDPS 106

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN--DAYLEVHAGAGGTESQDWAN 135
            + +   L           L +     +  L            LE+  GAGG E+  +AN
Sbjct: 107 TDSELHSLALEDLQSTTTSLAILSTNLKQALIPRHPFADLPCLLELRPGAGGEEAGIFAN 166

Query: 136 MLLRMYTRWAEKRKFKT---EALEIHDGEEAGIKSA----TLLIKGPNAYGWLKGEQGVH 188
            LLRMYT +   R       +    + G   G +       + I+ P +Y  L+ E GVH
Sbjct: 167 ELLRMYTMFCSNRGLHVTLLKKESENAGASGGSEDRLVEAVMEIETPGSYETLRTEAGVH 226

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYP--------------VVDDSIEIEISESDCRIDTYR 234
           R+ R+   +S  R HTS  S+ + P                D + +  I   +  ++  R
Sbjct: 227 RVQRVPATESKGRTHTSAVSVVILPSFPNNGEEGDSEMNFDDPNSDYYIDPQEVNVEKMR 286

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           A GAGGQHVN T+SA+R+THIPTG+VV  Q  RSQH+N+ +AW++LRA++ +   + REE
Sbjct: 287 AGGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWHLLRARIAQQRREAREE 346

Query: 295 IANIGE----SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMK 348
                         ++G G +IR+Y         D R+     +   +++G   L+  M 
Sbjct: 347 EMVKLRRGAMGGVGKMGRGDKIRTYNFG-QNRCTDHRSGFTVHNLGSIMEGGDGLEKIMD 405

Query: 349 ATLAI 353
           +    
Sbjct: 406 SVRGW 410


>gi|321479100|gb|EFX90056.1| hypothetical protein DAPPUDRAFT_299896 [Daphnia pulex]
          Length = 417

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 90/301 (29%), Positives = 150/301 (49%), Gaps = 12/301 (3%)

Query: 49  RQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL 108
           +QH+ +      ++     D   L  L+ ++D    L +          ++  +    +L
Sbjct: 92  KQHIQSLAGLGGKLLQTENDLQELKALSADDDKNGDLAKMVSEEFSQLKQILVQIQNEVL 151

Query: 109 S-----GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
                     +    +E  AG GG ES  + N +L+MY  + E   +  E  +I   +  
Sbjct: 152 ELILQEDNHQTEGIIMEFSAGVGGQESMLFCNEILQMYITYCESEGWDYELTDIEKSDLE 211

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           GI+ A + I   +AY  L+ E GVHR+ R+   +   R HTS  ++ + P     + + I
Sbjct: 212 GIRHAAICINNSDAYDRLQFESGVHRVQRVPKTEKAGRVHTSTVAVAILP-RPSEVTVNI 270

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
            + D +I+T RASGAGGQHVNTT+SAVRI HIP+GVV +CQ +RSQ +N+  A + +RA+
Sbjct: 271 EQKDLKIETKRASGAGGQHVNTTESAVRIVHIPSGVVAECQTQRSQMQNRKVAIDKIRAR 330

Query: 284 LYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           L+++++ ++        S K ++   G   +IR+Y   P   + D R N    +  + L 
Sbjct: 331 LFQMKIDQQLAT--TRSSRKLQVGSSGRSEKIRTYNF-PQDRITDHRINFTSHNLGEFLR 387

Query: 341 G 341
           G
Sbjct: 388 G 388


>gi|326470521|gb|EGD94530.1| peptide chain release factor 1 [Trichophyton tonsurans CBS 112818]
          Length = 438

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 86/341 (25%), Positives = 152/341 (44%), Gaps = 31/341 (9%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           +   +    +    + +K+          L  L  E    + L+  +++     +     
Sbjct: 71  RAAAKRIGEIAPVANALKDWDTAHESITELQGLIDEPSTDTELKSLAEDDITTTIGTLSS 130

Query: 103 -----QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
                +   +           +E+  GAGG E+  +A  +LRMYT +   R  +T  +++
Sbjct: 131 LSDTLKRALIPRHPFADMPCLIEIRPGAGGDEAGLFAAEMLRMYTSFCSSRGLRTTIIKM 190

Query: 158 HDGEEAG------IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
              +  G      +    + ++ P +Y  L+ E GVHR+ R+   ++  R HTS  S+ +
Sbjct: 191 EAEDGVGAGAEERLSEVVMEVETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMI 250

Query: 212 YP-------------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
            P               D + +  ++  D + + +RASGAGGQHVN T+SAVR+THIPTG
Sbjct: 251 LPSFPENNQEDSPLNFDDPNSDYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHIPTG 310

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRS 314
            V+  Q  RSQH+N+ +AW +LRAKL +   + RE+              + G G +IR+
Sbjct: 311 TVISMQDSRSQHENRRKAWLLLRAKLAQARREAREQEMMELRRGAMGGVNKTGRGDKIRT 370

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
           Y         D R+ +   +   V+DG  +L+  +++    
Sbjct: 371 YNF-TQSRCTDHRSGMTVHNIGKVMDGGENLEKIIESVQNW 410


>gi|119625009|gb|EAX04604.1| hCG2025689 [Homo sapiens]
          Length = 238

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 90/225 (40%), Positives = 124/225 (55%), Gaps = 9/225 (4%)

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             + + +  MY ++A  +++  E LE    E  G++ A+  I G  AY  +K E GVHR+
Sbjct: 1   MLFTSEIFDMYQQYAAFKRWHFETLEYFPSEVGGLRHASASIGGSEAYRHMKFEGGVHRV 60

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAV 250
            R+   +     HTS  ++ + P     I + I+  D RIDT RASGAG QHVNTTDSAV
Sbjct: 61  QRVPKTEKQGCVHTSTMTVAILPQ-PTEINLVINPKDLRIDTKRASGAGEQHVNTTDSAV 119

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---G 307
           RI H+PTGVV +CQQERSQ KNK  A   LRAKLY + ++  EEI     + K +I   G
Sbjct: 120 RIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHVE--EEINKRQNARKIQIGSKG 177

Query: 308 WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKAT 350
              +IR+Y   P   V D R N         + GD  LD+ +++ 
Sbjct: 178 RSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLLDELVQSL 221


>gi|193613150|ref|XP_001944471.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           [Acyrthosiphon pisum]
          Length = 400

 Score =  149 bits (376), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 88/300 (29%), Positives = 151/300 (50%), Gaps = 11/300 (3%)

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES--LLSGEA 112
            +S I+ ++  L           ++++     +        +L +   +  +  + +   
Sbjct: 82  LVSAIRSLKVDLQSLDEFEIEKEKDEEFGEQLQKEKKSHEEQLTLLELELLNSLVPNENF 141

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           D  D  LE+ AG GG E+  +   L  MY  +A  + +K+E  +    E  GI+ A L++
Sbjct: 142 DCEDVMLEITAGVGGQEAMIFTQELFEMYNSFAHYKGWKSEVADYCHTEMGGIRHACLML 201

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G + Y  L+ E GVHR+ R+   + + R HTS  ++ + P   +   + I++ D  I+T
Sbjct: 202 SGTDCYSLLQHEGGVHRVQRVPKTEKSGRIHTSTVTVAILPQPTELDVV-INDRDLVIET 260

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASGAGGQHVN TDSA+R+ H PTGV+V+CQ +RSQ KN+  A   LRA +Y+ +L+++
Sbjct: 261 KRASGAGGQHVNKTDSAIRMHHKPTGVIVECQTDRSQIKNRKIALQKLRAIIYKKQLEQQ 320

Query: 293 EEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFM 347
           + +     + K ++G      +IR+Y       + D R      +    L+G   LD  +
Sbjct: 321 QSL--TRSARKQQVGSSARSEKIRTYNFN-QDRITDHRLTKSFHNLVGFLEGREYLDKVV 377


>gi|213421201|ref|ZP_03354267.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 148

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 89/147 (60%), Positives = 110/147 (74%), Gaps = 1/147 (0%)

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           SS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+SAVRITHIPTG+V QCQ +
Sbjct: 1   SSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQND 60

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG QIRSYVL     +KDL
Sbjct: 61  RSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWGSQIRSYVLDD-SRIKDL 119

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLAI 353
           RT +E  +   VLDG LD F++A+L  
Sbjct: 120 RTGVETRNTQAVLDGSLDQFIEASLKA 146


>gi|72024372|ref|XP_797931.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115937037|ref|XP_001184225.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 422

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 102/318 (32%), Positives = 159/318 (50%), Gaps = 17/318 (5%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF------ 104
            L   +   +E+     +   L  L  E  D S  +E  +     K +++          
Sbjct: 89  ELGAVLDKWEELTSAEEEITELQRLIEEPSDTSQDKEMQELAAAEKDDLDAMIADISEEL 148

Query: 105 --ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
               L S E D ND  +E  AG GG E+  +A  +  MY R+A  R +    LE    + 
Sbjct: 149 VDLLLPSEETDDNDVIMEFTAGVGGQEAMLFAADMFEMYQRYAAYRGWTFSVLEYFTTDM 208

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G++ A++ + G  AY  L+ E GVHR+ R+   +S  R HTS  +I V P     I+++
Sbjct: 209 GGLRHASVSMSGDQAYLLLRQEAGVHRVQRVPRTESKGRIHTSTMAIAVLP-QPKEIDLK 267

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           +   D R++T +ASGAGGQHVNTTDSAVRITH+PTG+  + QQERSQHKN++ A  ML+ 
Sbjct: 268 LDPKDLRVETKKASGAGGQHVNTTDSAVRITHLPTGISAESQQERSQHKNRSIAMTMLQT 327

Query: 283 KLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           ++Y   L   ++ ++      +++G G    +IR+Y  Q    + D R         + L
Sbjct: 328 RIYNRILA--DQTSSERSMRSSQVGTGGRSEKIRTYNYQ-QDRITDHRRGRTVHGVPEYL 384

Query: 340 DGD--LDDFMKATLAIKK 355
            G   LD+ + + +   +
Sbjct: 385 LGSELLDEMVTSCVEGDQ 402


>gi|153210408|ref|ZP_01947622.1| peptide chain release factor 1 [Coxiella burnetii 'MSU Goat Q177']
 gi|120575132|gb|EAX31756.1| peptide chain release factor 1 [Coxiella burnetii 'MSU Goat Q177']
          Length = 267

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 83/259 (32%), Positives = 129/259 (49%), Gaps = 3/259 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD---RLCDNLIL 72
                 R S +     D  +  +    + L +E   L+  +   ++ Q     +     +
Sbjct: 9   LKTLTYRYSEIGGLLSDSTVINDQDRYRELGKEYAQLEPIVKCFQQFQQNEKAIESAEEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +    E      +E      + +   +  +   +     D  + +LE+ AG GG E+  
Sbjct: 69  QQEKDPELRKLAEEELEQLTLKKEELEDQLKLLLVPKDPNDERNVFLEIRAGTGGNEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY R+AE + ++   +  H+GE  G K     + G   Y  LK E G HR+ R
Sbjct: 129 FAGDLFRMYARYAETKGWRVNIVSAHEGEHGGFKEVIARVIGEGVYSQLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS  ++ + P VD+  +I+I+ ++ RIDT+RASGAGGQHVN TDSA+RI
Sbjct: 189 VPVTESQGRIHTSACTVAIMPEVDEIDQIKINPAELRIDTFRASGAGGQHVNRTDSAIRI 248

Query: 253 THIPTGVVVQCQQERSQHK 271
           TH+PTGVVV+CQ ER   K
Sbjct: 249 THLPTGVVVECQDERRNTK 267


>gi|296804966|ref|XP_002843310.1| peptide chain release factor 1 [Arthroderma otae CBS 113480]
 gi|238845912|gb|EEQ35574.1| peptide chain release factor 1 [Arthroderma otae CBS 113480]
          Length = 438

 Score =  148 bits (374), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 90/341 (26%), Positives = 150/341 (43%), Gaps = 31/341 (9%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           +   R    L    + +K+          L  L  E    + L+  + +     +     
Sbjct: 71  RAAARRLGELAPVANALKDWDRANESITELQGLINEPSTDAELKSLAQDDITSTIATLSS 130

Query: 103 -----QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
                +   +           +E+  GAGG E+  +A  +LRMY  +   R  +T  ++ 
Sbjct: 131 LSATLKRALIPRHPFADMPCLIEIRPGAGGDEAGLFAAEMLRMYMAFCSSRGLRTAIIKK 190

Query: 158 HDGEEAG------IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
              +  G      +  A + I+ P +Y  L+ E GVHR+ R+   ++  R HTS  S+ +
Sbjct: 191 ETEDGVGAGAEERLSEAVMEIETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMI 250

Query: 212 YP-------------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
            P               D + +  ++  D + + +RASGAGGQHVN T+SAVR+THIPTG
Sbjct: 251 LPSFPDNNQGDSPLNFDDPNSDYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHIPTG 310

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRS 314
            V+  Q  RSQH+N+ +AW +LRAKL +   + RE+              + G G +IR+
Sbjct: 311 TVISMQDSRSQHENRRKAWLLLRAKLAQARREAREQEMMELRRGAMGGVNKTGRGDKIRT 370

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
           Y         D R+ +   +   V+DG  +L+  M++    
Sbjct: 371 YNF-TQSRCTDHRSGMTVHNIGKVMDGGENLEKIMESVQNW 410


>gi|83773134|dbj|BAE63261.1| unnamed protein product [Aspergillus oryzae]
          Length = 388

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 95/338 (28%), Positives = 153/338 (45%), Gaps = 29/338 (8%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ 103
            + +    L    + + E          L  L  + D    L+  +              
Sbjct: 29  RIAKRVGELAPIANVLDEWDRANESISELNALLFDPDTDLELKSLAIEDLETVKAALPTI 88

Query: 104 FES-----LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
            E+     +      +    LE+  GAGG E+  +A  LLRMYT +  +R F++  +++ 
Sbjct: 89  SENLKKALVPRHPFAALPCLLEIRPGAGGDEAGLFAFELLRMYTAFCSRRGFRSNVIKLE 148

Query: 159 DGE---EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-- 213
            G+   E  +  A + ++   AY  L+ E GVHR+ R+   ++  R HTS  S+ V P  
Sbjct: 149 VGDGPAEDRLNEAVMEVEADGAYEILRTESGVHRVQRVPATETKGRTHTSAVSVMVLPSF 208

Query: 214 ------------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
                         D + +  +   + R +  RA GAGGQHVN T+SA+R+TH+PTG+VV
Sbjct: 209 PETGGAMDNALNFDDPNSDYYVDPQEVRSEKMRAGGAGGQHVNKTESAIRLTHMPTGIVV 268

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRSYVL 317
             Q  RSQH N+ +AW +LRA+L E   + RE+               +G G +IR+Y  
Sbjct: 269 SMQDSRSQHANRKKAWQILRARLAEARQEAREQKFVELRRGVLGGVARMGRGDKIRTYNY 328

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
                  D R++I   + +DVLDG   L+  M++  + 
Sbjct: 329 G-QSRCTDHRSSITIHNLNDVLDGGEGLETVMESVRSW 365


>gi|126337707|ref|XP_001368579.1| PREDICTED: similar to Mitochondrial translational release factor 1
           [Monodelphis domestica]
          Length = 447

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 98/351 (27%), Positives = 156/351 (44%), Gaps = 21/351 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           ++       L+       +  +    + + R    L    +  KEIQ+       L  + 
Sbjct: 79  EDLTGEYQRLDRLLHHVSV-SDGDR-RTMSRRHAELAQFTAIYKEIQESEKAIEDLESMC 136

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESL-------LSGEADSNDAYLEVHAG--AGG 127
              ++    Q      +  ++  +                 + D +D  LEV +G   GG
Sbjct: 137 KSLNEQDEKQLLELAFEEREVIDQKINRLCQELFQSLVPKEKDDKSDVILEVTSGRTTGG 196

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + +  E L     +  G+  A   I G + Y ++K E G+
Sbjct: 197 DICQQFTKEIFEMYQSYSCYKGWNFEILNYTTADYGGLHHAAARISGDSVYEYMKYEGGI 256

Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           HR+ RI     +SR     + +   +     D ++I +   D RIDT+RA GAGGQHVNT
Sbjct: 257 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDIRVEPKDLRIDTFRAKGAGGQHVNT 316

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRI HIPTG+VV+CQQ+RSQ +NK  A+ +LRAKLY+  ++K +         K +
Sbjct: 317 TDSAVRIVHIPTGLVVECQQQRSQIQNKDTAFRLLRAKLYQQTIEKEQSKKQSV--RKLQ 374

Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351
           +G      +IR+Y       V D R + E     + L G   LD  ++  L
Sbjct: 375 VGTRAQSERIRTYNF-TQDRVTDHRISYEARDIKEFLCGGRPLDTLIQRLL 424


>gi|317151025|ref|XP_001824394.2| peptide chain release factor 1 [Aspergillus oryzae RIB40]
          Length = 427

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 95/338 (28%), Positives = 153/338 (45%), Gaps = 29/338 (8%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQ 103
            + +    L    + + E          L  L  + D    L+  +              
Sbjct: 68  RIAKRVGELAPIANVLDEWDRANESISELNALLFDPDTDLELKSLAIEDLETVKAALPTI 127

Query: 104 FES-----LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
            E+     +      +    LE+  GAGG E+  +A  LLRMYT +  +R F++  +++ 
Sbjct: 128 SENLKKALVPRHPFAALPCLLEIRPGAGGDEAGLFAFELLRMYTAFCSRRGFRSNVIKLE 187

Query: 159 DGE---EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-- 213
            G+   E  +  A + ++   AY  L+ E GVHR+ R+   ++  R HTS  S+ V P  
Sbjct: 188 VGDGPAEDRLNEAVMEVEADGAYEILRTESGVHRVQRVPATETKGRTHTSAVSVMVLPSF 247

Query: 214 ------------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
                         D + +  +   + R +  RA GAGGQHVN T+SA+R+TH+PTG+VV
Sbjct: 248 PETGGAMDNALNFDDPNSDYYVDPQEVRSEKMRAGGAGGQHVNKTESAIRLTHMPTGIVV 307

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRSYVL 317
             Q  RSQH N+ +AW +LRA+L E   + RE+               +G G +IR+Y  
Sbjct: 308 SMQDSRSQHANRKKAWQILRARLAEARQEAREQKFVELRRGVLGGVARMGRGDKIRTYNY 367

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
                  D R++I   + +DVLDG   L+  M++  + 
Sbjct: 368 G-QSRCTDHRSSITIHNLNDVLDGGEGLETVMESVRSW 404


>gi|153845428|ref|ZP_01993769.1| peptide chain release factor 2 [Vibrio parahaemolyticus AQ3810]
 gi|149745113|gb|EDM56364.1| peptide chain release factor 2 [Vibrio parahaemolyticus AQ3810]
          Length = 148

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 88/146 (60%), Positives = 109/146 (74%), Gaps = 1/146 (0%)

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
            S  +YP +D++I I+I+ +D RID YRASGAGGQHVNTT+SAVRITH+PT  VVQCQ +
Sbjct: 1   MSALIYPEIDENIAIDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQND 60

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
           RSQHKNK QA   LRAKL+ELELQK+       E +K++IGWG QIRSYVL     +KDL
Sbjct: 61  RSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQIRSYVLDD-SRIKDL 119

Query: 327 RTNIEKTSPSDVLDGDLDDFMKATLA 352
           RT +E  +   VLDGDLD F++A+L 
Sbjct: 120 RTGVENRNTQAVLDGDLDKFIEASLK 145


>gi|297291498|ref|XP_001095577.2| PREDICTED: mitochondrial translational release factor 1-like
           isoform 2 [Macaca mulatta]
          Length = 326

 Score =  148 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 85/200 (42%), Positives = 113/200 (56%), Gaps = 9/200 (4%)

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E+  G   G++ A+  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P  
Sbjct: 114 EVTAGVGGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILP-Q 172

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
              I + I+  D RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KN+  
Sbjct: 173 PTEINLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREL 232

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEK 332
           A   LRAKLY + L+K  E      + K +I   G   +IR+Y   P   V D R +   
Sbjct: 233 AMKKLRAKLYSMHLEK--EANKTQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRISKTL 289

Query: 333 TSPSDVLDGD--LDDFMKAT 350
                 + GD  LD+ +++ 
Sbjct: 290 HDLETFMQGDYLLDELVQSL 309


>gi|195398186|ref|XP_002057705.1| GJ17953 [Drosophila virilis]
 gi|194141359|gb|EDW57778.1| GJ17953 [Drosophila virilis]
          Length = 393

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 104/318 (32%), Positives = 161/318 (50%), Gaps = 12/318 (3%)

Query: 48  ERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
               LD  ++ +++ +    +     +LA E+D+        +N    +L  + ++    
Sbjct: 58  RLSRLDPVVNSLEKHRALQRNITPEQDLAAEKDEDMRALMLEENNVYAELLRKQEEAMLQ 117

Query: 108 ----LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
               L+   D      EV+AGAGG E+  +A  L  MYT + E   ++ E       +  
Sbjct: 118 ELLALADHEDYPSLIFEVNAGAGGQEAMLFAQELYDMYTSYFEHMGWEYEQYAHETTDIG 177

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G++ A LL+  P AY WL+ E GVHR+ R+   + + R HTS +SI V P     +++ I
Sbjct: 178 GLRYANLLVNDPEAYNWLRYEAGVHRVQRVPATEKSGRMHTSTASITVIP-RPADVQVHI 236

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +E D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+  A   L+AK
Sbjct: 237 AERDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVESQSERSQLKNRELALKRLQAK 296

Query: 284 LYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPYQMVKDLRT--NIEKTSPSDVLD 340
           L + +L+  E        + +  +    +IR+Y       V D R      + + S  L+
Sbjct: 297 LMQQQLESSEATKQATRKAQQGNLNRNEKIRTYNFV-QDRVTDHRVQQGGTQHNLSGFLE 355

Query: 341 GD--LDDFMKAT-LAIKK 355
           G   L D ++   L  +K
Sbjct: 356 GGQPLSDLIERLHLEQRK 373


>gi|317033212|ref|XP_001395081.2| peptide chain release factor 1 [Aspergillus niger CBS 513.88]
          Length = 429

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 92/338 (27%), Positives = 145/338 (42%), Gaps = 29/338 (8%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV---- 99
            L +    L    S +KE +        LL L  + +  + L+  +              
Sbjct: 68  KLAKRVGELAPIASTLKEWEHANSSISELLSLLDDPETDAELRSLAVEDLESSKIALPAI 127

Query: 100 -EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
            +  +   +           LE+  GAGG E+  +A  +LRMY  +  +R F+   ++  
Sbjct: 128 ADNLKKALIPRHPFADLPCLLEIRPGAGGDEAGLFAFEVLRMYIAFCSRRGFRYSIIKQD 187

Query: 159 DGE---EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-- 213
             +   +  +  A L +    AY  L+ E GVHR+ R+   ++  R HTS  S+ + P  
Sbjct: 188 VADGPAQDRLSEAVLEVDADGAYDILRTESGVHRVQRVPATEAKGRTHTSAVSVMILPSF 247

Query: 214 ------------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
                         D + +  +   + R +  RA GAGGQHVN T+SA+R+THIPTG VV
Sbjct: 248 PDSGSGLDSSLNFEDPNSDYYVDPQEVRTEKMRAGGAGGQHVNKTESAIRLTHIPTGTVV 307

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEI----ANIGESSKTEIGWGRQIRSYVL 317
             Q  RSQH N+ +AW +LRA+L E   + RE+               +G G +IR+Y  
Sbjct: 308 SMQDSRSQHANRKKAWQVLRARLAEARREAREQELVNLRRGAMGGVARMGRGDKIRTYNY 367

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
                  D R+ +   +   VLDG   L+  M +    
Sbjct: 368 G-QNRCTDHRSGLTIHNLDSVLDGGEGLETVMDSVRTW 404


>gi|134079787|emb|CAK40922.1| unnamed protein product [Aspergillus niger]
          Length = 462

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 92/338 (27%), Positives = 145/338 (42%), Gaps = 29/338 (8%)

Query: 44  MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV---- 99
            L +    L    S +KE +        LL L  + +  + L+  +              
Sbjct: 101 KLAKRVGELAPIASTLKEWEHANSSISELLSLLDDPETDAELRSLAVEDLESSKIALPAI 160

Query: 100 -EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH 158
            +  +   +           LE+  GAGG E+  +A  +LRMY  +  +R F+   ++  
Sbjct: 161 ADNLKKALIPRHPFADLPCLLEIRPGAGGDEAGLFAFEVLRMYIAFCSRRGFRYSIIKQD 220

Query: 159 DGE---EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-- 213
             +   +  +  A L +    AY  L+ E GVHR+ R+   ++  R HTS  S+ + P  
Sbjct: 221 VADGPAQDRLSEAVLEVDADGAYDILRTESGVHRVQRVPATEAKGRTHTSAVSVMILPSF 280

Query: 214 ------------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
                         D + +  +   + R +  RA GAGGQHVN T+SA+R+THIPTG VV
Sbjct: 281 PDSGSGLDSSLNFEDPNSDYYVDPQEVRTEKMRAGGAGGQHVNKTESAIRLTHIPTGTVV 340

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEI----ANIGESSKTEIGWGRQIRSYVL 317
             Q  RSQH N+ +AW +LRA+L E   + RE+               +G G +IR+Y  
Sbjct: 341 SMQDSRSQHANRKKAWQVLRARLAEARREAREQELVNLRRGAMGGVARMGRGDKIRTYNY 400

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
                  D R+ +   +   VLDG   L+  M +    
Sbjct: 401 G-QNRCTDHRSGLTIHNLDSVLDGGEGLETVMDSVRTW 437


>gi|171693921|ref|XP_001911885.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946909|emb|CAP73713.1| unnamed protein product [Podospora anserina S mat+]
          Length = 431

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 91/364 (25%), Positives = 151/364 (41%), Gaps = 37/364 (10%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
                  L  +  D +   +    + + +    +       K+ +        L  L   
Sbjct: 46  LTAEHDQLTAQLAD-NF--D----EKIAKRAGEVHRIAEAFKKFEHAKASLRELEGLLKS 98

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFES---LLSGEADSNDAYLEVHAGAGGTESQDWAN 135
           +D         D     +   E  +  S               +EV  G GGTE + +A+
Sbjct: 99  DDAEMREMAQEDLAATNEQLAESSRNLSVALTPKHPFADMPCLIEVVPGPGGTEGRFFAD 158

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGI---------KSATLLIKGPNAYGWLKGEQG 186
            + +MY  +   + F+T+ ++    +  G          + A L +    AY   +GE G
Sbjct: 159 SVFKMYQAYCANKGFRTKVVQYLAADSTGEKGGDGETALQEAVLEVMEEGAYAHFRGEAG 218

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYP------------VVDDSIEIEISESDCRIDTYR 234
           +HR+ R+   + + R HTS  ++WV P              +   +  I  ++ + +  R
Sbjct: 219 MHRVQRVPATEKSGRTHTSAVAVWVLPSFAENATASDGDWDNPESDFYIDPAEVKSEKMR 278

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASGAGGQHVN T+SA+R+THIPTG+ V  Q  RSQH N+A AW +LR+++ +   + REE
Sbjct: 279 ASGAGGQHVNKTESAIRLTHIPTGITVSMQDSRSQHTNRADAWRLLRSRIAQKRREAREE 338

Query: 295 IANIGESSK---TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKA 349
            A    SS     ++  G +IR+Y         D R  ++  +  DVL G   L   + A
Sbjct: 339 AARALRSSVLSSAQLTRGDKIRTYNYG-QDRCTDHRAGLDVHNLPDVLRGGDTLGKVIDA 397

Query: 350 TLAI 353
               
Sbjct: 398 VHGW 401


>gi|296422823|ref|XP_002840958.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295637185|emb|CAZ85149.1| unnamed protein product [Tuber melanosporum]
          Length = 309

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 83/260 (31%), Positives = 125/260 (48%), Gaps = 15/260 (5%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA-EKRKFKTEALEIHDGEEAG--I 165
                   A +E+  G GG+E+  +A  LL++YT +    R +    + +  G E G  +
Sbjct: 40  PHPFAHLSALVEIRPGTGGSEASLFAGDLLKLYTMYCANIRNWPLSMVSLTAGAEGGDGV 99

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD-------- 217
           + A   ++   AY   +GE GVHR+ R+   +   R HTS  ++ V P   +        
Sbjct: 100 QEAIFEVEASGAYEIFRGEAGVHRVQRVPATEKQGRTHTSTVNVVVLPSFPEVQLGEGEE 159

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
             +  I   D R+D  RA GAGGQHVNTTDSAVR+THIPTG+V   Q  RSQHKN+A+A 
Sbjct: 160 DPDSIIDMKDVRVDVMRARGAGGQHVNTTDSAVRMTHIPTGIVAAIQDSRSQHKNRAKAM 219

Query: 278 NMLRAKLYELELQKREEIANIGESS--KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
            +L++++ E    +RE        S  K   G   ++R+Y       V D R        
Sbjct: 220 VVLKSRIAEKRRAEREAEELALRRSVAKVNAGRSDKMRTYNYI-QNRVTDHRCGFSLHDL 278

Query: 336 SDVLDGD-LDDFMKATLAIK 354
              ++G+ LD  +      +
Sbjct: 279 PSFMNGETLDSMIDRVRKWQ 298


>gi|322704975|gb|EFY96565.1| putative translation releasing factor RF-1 [Metarhizium anisopliae
           ARSEF 23]
          Length = 415

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 93/371 (25%), Positives = 148/371 (39%), Gaps = 42/371 (11%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
                    L           +  +A    R    L    + +   Q        L  +A
Sbjct: 31  KALSAEHEALQKSLNAQ---FDSQKA----RRAGELHRVAAALSAWQQSHSSIRDLQAMA 83

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQD 132
            +E D  +     D LQ  + ++   +                   +E   G GG E + 
Sbjct: 84  DDEQDPDLAAIARDELQAEEEKLASLEKNLSASLTPQHPFADMPCMIEFRPGPGGLEGRY 143

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAG----------IKSATLLIKGPNAYGWLK 182
           + + L +MY     +R ++   L+    + AG          ++ A L I+   AY   +
Sbjct: 144 FTDSLFKMYKALCARRGYRANVLKYEMADAAGDQSSSAGENPVQEAILEIQDQGAYDLFR 203

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD---------------DSIEIEISESD 227
            E G+HR+ RI   +S  R HTS  ++WV P                     +  ++  +
Sbjct: 204 SEAGMHRVQRIPSTESKGRVHTSAVAVWVLPSFPEGGSSGGGGEADADDPESDFYVNPQE 263

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            R++T RA GAGGQHVN T+SA+R+TH+PTG  V  Q  RSQ +N+  AW +LR+++   
Sbjct: 264 VRVETMRARGAGGQHVNKTESAIRMTHLPTGTTVSMQDHRSQQRNREDAWKLLRSRIAGQ 323

Query: 288 ELQKREEIANIGESS---KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-- 342
             + R   A    +S   + +I  G +IR+Y         D R  ++  +  DVLDG   
Sbjct: 324 RAELRMHEAARLRNSVLAQAQITRGDKIRTYNYN-QDRCTDHRAGLDVHNLPDVLDGGET 382

Query: 343 LDDFMKATLAI 353
           LD  M A    
Sbjct: 383 LDRVMDAAKEW 393


>gi|295657325|ref|XP_002789232.1| peptide chain release factor 1 [Paracoccidioides brasiliensis Pb01]
 gi|226284000|gb|EEH39566.1| peptide chain release factor 1 [Paracoccidioides brasiliensis Pb01]
          Length = 438

 Score =  146 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 98/351 (27%), Positives = 156/351 (44%), Gaps = 32/351 (9%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           +     + L +K  +     N   AK +  E      A+    +  + + +   LLE + 
Sbjct: 51  SIADEHASLTSKLAE-SF--NPKTAKRVG-ELATTATALKEWDKAHESISELNALLEDSS 106

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN--DAYLEVHAGAGGTESQDWAN 135
            + D   L           L V  +  +  L            LE+  GAGG E+  +AN
Sbjct: 107 TDSDLRSLALEDLQTTTASLSVLSENLKQALIPRHPFADLPCLLELRPGAGGDEAGIFAN 166

Query: 136 MLLRMYTRWAEKRKFKT---EALEIHDGEEAGIKSA----TLLIKGPNAYGWLKGEQGVH 188
            LLRMYT +   R  +    +    + G   G +       + I+ P +Y  L+ E GVH
Sbjct: 167 ELLRMYTMFCANRGLRATLLKKESENAGASGGSEDRLAEAVMEIETPGSYETLRTEAGVH 226

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYP--------------VVDDSIEIEISESDCRIDTYR 234
           R+ R+   +S  R HTS  S+ + P                D + +  I   +  ++  R
Sbjct: 227 RVQRVPATESKGRTHTSAVSVVILPSFPRNGEEGDGELNFDDPNSDFYIDPREVNVEKMR 286

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASGAGGQHVN T+SA+R+THIPTG+VV  Q  RSQH+N+ +AW +LRA++ +   + REE
Sbjct: 287 ASGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWQLLRARIAQQRREAREE 346

Query: 295 IANIGE----SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
                         ++G G +IR+Y         D R+ +   +  D+++G
Sbjct: 347 EMVKLRRGAMGGVGKMGRGDKIRTYNFG-QNRCTDHRSGLTLHNLVDIMEG 396


>gi|161833777|ref|YP_001597973.1| peptide chain release factor RF2 [Candidatus Sulcia muelleri GWSS]
 gi|152206267|gb|ABS30577.1| peptide chain release factor RF2 [Candidatus Sulcia muelleri GWSS]
          Length = 214

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 94/216 (43%), Positives = 148/216 (68%), Gaps = 4/216 (1%)

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISP 195
           ML RMY  WAEK  FK + +    G+  G++S T ++KG + +G+LKGE GVHRLVRISP
Sbjct: 1   MLYRMYIMWAEKHNFKIKKINSLQGDIIGLRSITFIVKGLSPFGYLKGENGVHRLVRISP 60

Query: 196 YDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           +D++ R HTSF+S+++YP++DD I I+I+ SD   +T+R+ G+GGQ+VN  +S VR+ H 
Sbjct: 61  FDNSKR-HTSFASVYIYPLIDDDINIKINTSDISWNTFRSRGSGGQNVNKVESGVRLHHH 119

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSY 315
           PT ++++  + +SQ  NK +A  +L+++L+ +E + +    N     K +I W  QIR+Y
Sbjct: 120 PTNIIIENSETKSQFNNKIKALKLLKSRLFYIEKKSKNTTCNKL---KKKIEWSSQIRNY 176

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           ++ PY++VKDLRT  E +    VL+G++D F+K  L
Sbjct: 177 IMHPYKLVKDLRTGYETSDIESVLNGEIDIFLKKNL 212


>gi|302830560|ref|XP_002946846.1| hypothetical protein VOLCADRAFT_103257 [Volvox carteri f.
           nagariensis]
 gi|300267890|gb|EFJ52072.1| hypothetical protein VOLCADRAFT_103257 [Volvox carteri f.
           nagariensis]
          Length = 361

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 105/325 (32%), Positives = 150/325 (46%), Gaps = 37/325 (11%)

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
           +L D   LL+           +E  +  Q+            +     D   A LE+ AG
Sbjct: 11  QLEDLAALLKDPDSRVRAMAEEEGRELQQQAAGLTRRLLLALVPRDPRDGRAALLEMRAG 70

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGPN------- 176
           AGG E+  +   LL MY ++A  R +  + +E+   E   G+K     +           
Sbjct: 71  AGGQEAALFCGELLEMYRKFAMSRGWSWQVVELTASEVPGGVKHVVAAVAAGRGAGRRAG 130

Query: 177 ------------------------AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVY 212
                                    YG L  E GVHR+ R+   ++  R HTS  ++ V 
Sbjct: 131 GIGDGGEGYDGGEGNSDQDGDAIGVYGTLLPESGVHRVQRVPVTEAQGRVHTSTVAVVVL 190

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P   D +++++ + D RI+T RASGAGGQHVN TDSAVRITH+PTG+VV CQ ERSQH N
Sbjct: 191 P-QADEVDVKLRDEDLRIETMRASGAGGQHVNVTDSAVRITHVPTGLVVSCQNERSQHLN 249

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESS-KTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
           +A A  +LRA+LY+LE+QKR +  +   S+         +IR+Y   P   V D R ++ 
Sbjct: 250 RAAALKILRARLYDLEMQKRAKEMDEQRSALVASADRSERIRTYNF-PQGRVTDHRIHLT 308

Query: 332 KTSPSDVLDG--DLDDFMKATLAIK 354
                 VL G   L   M    A +
Sbjct: 309 LHDLDSVLVGGEGLQRLMGVLRAAR 333


>gi|146161938|ref|XP_001008252.2| Peptidyl-tRNA hydrolase domain containing protein [Tetrahymena
           thermophila]
 gi|146146594|gb|EAR88007.2| Peptidyl-tRNA hydrolase domain containing protein [Tetrahymena
           thermophila SB210]
          Length = 452

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 80/342 (23%), Positives = 154/342 (45%), Gaps = 18/342 (5%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
              + +           ++   + L ++   L       ++++  +     L +   E  
Sbjct: 90  NEYTDIQKILSQEQQQADI-NLEQLRKKINVLQPLNDVFEKLEQNIKTLQELQKQKEESA 148

Query: 81  DCSILQETSDNLQRIKLEVEYK------QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
               +    +       ++  +      +         D ++  LEV  GAGG+ES  +A
Sbjct: 149 SDPEMLALIEEEMENSKQLIDELQDECLEQLLPKGKHDDCSEITLEVRGGAGGSESSLFA 208

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEE--AGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
             + +MY  +  ++ ++              G K   L + G N Y  +  E GVH+++R
Sbjct: 209 EEVFKMYQAFFAQQGYQFSIDSFQVDMAINKGCKLGVLKVSGTNIYKKMMNESGVHKVIR 268

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R H+S  S+    +    ++ ++ E D + +  R+ GAGGQHVN  +SA R+
Sbjct: 269 VPETESKGRLHSSTISVV--VMPVVPMDFKVDEKDLKFEFMRSQGAGGQHVNKVESACRV 326

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ- 311
           TH+PTG+ V CQ +R Q +NK +A  +L  KL+++E++K  +     +  K++IG G + 
Sbjct: 327 THLPTGISVLCQDDRQQERNKQRALKLLTEKLFQVEVEKSNQ--QQSDQRKSQIGGGDRS 384

Query: 312 --IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKAT 350
             IR+Y   P   + D RTN+       ++ G+ L++F+   
Sbjct: 385 DKIRTYNF-PQGRITDHRTNLTLFGIEKMMKGEFLEEFIDEY 425


>gi|73989052|ref|XP_542584.2| PREDICTED: similar to mitochondrial translational release factor 1
           isoform 1 [Canis familiaris]
          Length = 456

 Score =  146 bits (367), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 102/337 (30%), Positives = 150/337 (44%), Gaps = 31/337 (9%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           K L R    L    +  +EIQ+       L  +          Q     L+  +   E  
Sbjct: 103 KSLNRRHAELAPLAAIYQEIQEAEQAIEELDSMCKSLSKQDEKQLQELALEERQTIAEKI 162

Query: 103 QFES-------LLSGEADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTE 153
                      +   + D ND  +EV +G   GG   Q +   +  MY  ++  + +K E
Sbjct: 163 NVLYSELFQSLVPKEKYDKNDVIIEVTSGRTTGGDICQQFTREIFDMYQNYSSYKNWKFE 222

Query: 154 ALEIHDGE------------EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSR 201
            L     +              G+  A   I G N Y  LK E GVHR+ RI     ++R
Sbjct: 223 LLNYTPADYGSDLKPCGFVIVGGLHHAAARISGDNVYKHLKYEGGVHRVQRIPEVGLSAR 282

Query: 202 RH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
                + +   +     D +++++   D RIDT+RA GAGGQHVNTTDSAVR+ HIPTG+
Sbjct: 283 MQRIHTGTMSVIVLPQPDEVDVKVDPKDLRIDTFRAKGAGGQHVNTTDSAVRLVHIPTGL 342

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW---GRQIRSYV 316
           VV+CQQERSQ KNK  A  +LRA+LY+  ++K  +      + K ++G      +IR+Y 
Sbjct: 343 VVECQQERSQIKNKEIALRVLRARLYQQIIEK--DKCQQQSTRKLQVGTRAQSERIRTYN 400

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351
                 V D R   E     + L G+  LD  ++  L
Sbjct: 401 F-TQDRVTDHRIAYEVRGIKEFLCGEKCLDQLIQRLL 436


>gi|156546340|ref|XP_001606563.1| PREDICTED: similar to ENSANGP00000017484 [Nasonia vitripennis]
          Length = 402

 Score =  146 bits (367), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 94/293 (32%), Positives = 158/293 (53%), Gaps = 8/293 (2%)

Query: 53  DNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEA 112
              I    +I + + +   L+E   +    +  ++ S+  +  +++ E     +      
Sbjct: 85  KTLIDERTKIYENIKNLAELVEEDKDMKKLAEEEKLSNEARLKEIDNELFSALAQSLSGD 144

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           + ++  LE+ AG GG E+  +   LL MY +      +  + +E+ +  + G + A+++I
Sbjct: 145 NFDEIILEITAGVGGQEAMLFVKNLLEMYIKHLSYLGYSYDIIEMDESPQGGCRHASIMI 204

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
            G  ++  L+ E GVHR+ R+   + + R HTS  S+ V P   + I++EI   D RIDT
Sbjct: 205 SGKESFEKLRHEAGVHRVQRVPATEKSGRIHTSVVSVGVLPQ-PNDIQVEIHAKDLRIDT 263

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASGAGGQHVNTT+SAVR+TH+PTG+ V+CQ +RSQ +N+  A   LRAK+YE +L ++
Sbjct: 264 MRASGAGGQHVNTTNSAVRVTHLPTGMSVECQTDRSQIRNRELAMAKLRAKMYEQKLARQ 323

Query: 293 EEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLR-TNIEKTSPSDVLDG 341
             + +  E  K ++G G +   IR+Y       V D R +N    +    L+G
Sbjct: 324 --LRSASEMRKQQMGMGERHEKIRTYNFN-QDRVTDHRLSNGTLHNLKGFLEG 373


>gi|325089543|gb|EGC42853.1| peptide chain release factor 1 [Ajellomyces capsulatus H88]
          Length = 438

 Score =  145 bits (366), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 92/368 (25%), Positives = 154/368 (41%), Gaps = 40/368 (10%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           +     S L ++  +     +      +++    L    + +KE +        L  L  
Sbjct: 51  SIADEHSTLTSRLAE-TF--DP----KIVKRAGELATTATTLKEWEKANESISELNNLLE 103

Query: 78  EEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +    S L+  +    R             +   +           LE+  GAGG E+  
Sbjct: 104 DPSTDSELRSLALEDLRSAKASLAILSSNLKQTLIPRHPFADLPCLLELRPGAGGEEAGI 163

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-------KSATLLIKGPNAYGWLKGEQ 185
           +AN LLRMYT +   R  +   L+                  A + I+ P +Y  L+ E 
Sbjct: 164 FANELLRMYTMFCSNRSLRATLLKKECENAGANGGSEDRLIEAVMEIETPGSYETLRTEA 223

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI--------------EIEISESDCRID 231
           GVHR+ R+   ++  R HTS  S+ + P    +I              +  I   +  ++
Sbjct: 224 GVHRVQRVPATENKGRTHTSAVSVVILPSFPSNIGEGDSELNFDDPNSDYYIDPQEVNVE 283

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
             RA GAGGQHVN T+SA+R+THIPTG+VV  Q  RSQH+N+ +AW++LRA++ +   + 
Sbjct: 284 KMRAGGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWHLLRARIAQQRREA 343

Query: 292 REEIANIGE----SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDD 345
           REE              ++G G +IR+Y         D R+ +   +   +++G   L+ 
Sbjct: 344 REEEMVKLRRGVMGGVAKMGRGDKIRTYNFG-QNRCTDHRSGLTLHNLGSIMEGGDGLEK 402

Query: 346 FMKATLAI 353
            M +    
Sbjct: 403 IMDSVRGW 410


>gi|240279273|gb|EER42778.1| peptide chain release factor 1 [Ajellomyces capsulatus H143]
          Length = 438

 Score =  145 bits (366), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 92/368 (25%), Positives = 154/368 (41%), Gaps = 40/368 (10%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           +     S L ++  +     +      +++    L    + +KE +        L  L  
Sbjct: 51  SIADEHSTLTSRLAE-TF--DP----KIVKRAGELATTATTLKEWEKANESISELNNLLE 103

Query: 78  EEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +    S L+  +    R             +   +           LE+  GAGG E+  
Sbjct: 104 DPSTDSELRSLALEDLRSAKASLAILSSNLKQTLIPRHPFADLPCLLELRPGAGGEEAGI 163

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-------KSATLLIKGPNAYGWLKGEQ 185
           +AN LLRMYT +   R  +   L+                  A + I+ P +Y  L+ E 
Sbjct: 164 FANELLRMYTMFCSNRSLRATLLKKECENAGANGGSEDRLIEAVMEIETPGSYETLRTEA 223

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI--------------EIEISESDCRID 231
           GVHR+ R+   ++  R HTS  S+ + P    +I              +  I   +  ++
Sbjct: 224 GVHRVQRVPATENKGRTHTSAVSVVILPSFPSNIGEGDSELNFDDPNSDYYIDPQEVNVE 283

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
             RA GAGGQHVN T+SA+R+THIPTG+VV  Q  RSQH+N+ +AW++LRA++ +   + 
Sbjct: 284 KMRAGGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWHLLRARIAQQRREA 343

Query: 292 REEIANIGE----SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDD 345
           REE              ++G G +IR+Y         D R+ +   +   +++G   L+ 
Sbjct: 344 REEEMVKLRRGVMGGVAKMGRGDKIRTYNFG-QNRCTDHRSGLTLHNLGSIMEGGDGLEK 402

Query: 346 FMKATLAI 353
            M +    
Sbjct: 403 IMDSVRGW 410


>gi|19113899|ref|NP_592987.1| mitochondrial peptide chain release factor (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|1172908|sp|Q09691|RF1M_SCHPO RecName: Full=Putative peptide chain release factor 1,
           mitochondrial; Short=MRF-1; Short=MtRF-1; Flags:
           Precursor
 gi|1052800|emb|CAA90504.1| mitochondrial peptide chain release factor (predicted)
           [Schizosaccharomyces pombe]
          Length = 396

 Score =  145 bits (366), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 91/327 (27%), Positives = 154/327 (47%), Gaps = 12/327 (3%)

Query: 37  QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK 96
            +   AK + R  + + NA S  K + +++ D   +     + +   +     + +    
Sbjct: 64  NDTDLAKRIAR-LRRVHNAYSKFKSLSEQISDLKQMEAQESDAEVKMMAVTEINEISNKI 122

Query: 97  -LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
              +E  +   L   ++ +  A +E+  G GGTE+  +AN L+ MY ++A  + +  + +
Sbjct: 123 PKSIEDLENTLLPQADSYALPALIEIRPGVGGTEAAIFANELVEMYFQYANFKGWNCKFI 182

Query: 156 EIHD-GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
                     I  A   I+G  AYG L  E GVHR+ R    ++  R HTS +S+ V P 
Sbjct: 183 SKSAVQGLEAITEAIFSIEGEGAYGHLMLEGGVHRVQRTPATETKGRVHTSTASVIVLPQ 242

Query: 215 VDDSIEIE-ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
           V +         S+ +I+  R+ GAGGQHVN T+SAVR+THIPTG+ V  Q  RSQH+NK
Sbjct: 243 VSNDESSSLYDSSEVKIEVMRSRGAGGQHVNRTESAVRLTHIPTGITVSMQDSRSQHQNK 302

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNI 330
            +A+ +L ++L  L   K  E   +    K ++       ++R+Y       V D R  +
Sbjct: 303 EKAFLVLNSRLAALNAAKENEAERL--KRKNQVTSSDRSEKLRTYNFN-QNRVTDHRIGL 359

Query: 331 EKTSPSDVLDGD--LDDFMKATLAIKK 355
                S  + G+   D+F++      +
Sbjct: 360 SMHDLSTFMQGEEKFDEFLEKIRIWNR 386


>gi|302759755|ref|XP_002963300.1| hypothetical protein SELMODRAFT_405078 [Selaginella moellendorffii]
 gi|300168568|gb|EFJ35171.1| hypothetical protein SELMODRAFT_405078 [Selaginella moellendorffii]
          Length = 509

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 102/306 (33%), Positives = 162/306 (52%), Gaps = 24/306 (7%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
           ++  +  +  +  +KE+     ++  +  LA  E   +  +        +   +   + +
Sbjct: 2   IKALRAKEKEVIGLKELVKESVEDEEMRRLASGELQTATREVRDAQHDVLLELIPKDEAD 61

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           S                 GAGG E+  +A+ L +MY ++A    ++ E L I   +  G 
Sbjct: 62  SR----------------GAGGDEASIFASDLFKMYDKYAANNSWRFEVLSITTTDTRGY 105

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K A+  I G   YG LK E GVHR+ R+   +   R HTS +S+ + P   + I++EI  
Sbjct: 106 KEASAAISGDGVYGALKFESGVHRVQRVPVTEKAGRIHTSTASVAILP-EANEIDVEIRN 164

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            + +IDTYRA GAGGQHVNTT SAVR+TH PTG+VV  Q ERSQHKNKA+A ++L A+LY
Sbjct: 165 DEIKIDTYRAGGAGGQHVNTTCSAVRVTHTPTGIVVAIQDERSQHKNKAKALSILYARLY 224

Query: 286 ELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG- 341
           ELE  +   +A+  E  + +IG      +IR+Y   P   V D R  + + +   +++G 
Sbjct: 225 ELERSR--AVASRSELRQDQIGSSDRSERIRTYNF-PQGRVTDHRVGVTQHAIEQIMEGI 281

Query: 342 DLDDFM 347
           D+D+++
Sbjct: 282 DVDNWI 287


>gi|147836146|emb|CAN74766.1| hypothetical protein VITISV_041859 [Vitis vinifera]
          Length = 450

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 87/343 (25%), Positives = 164/343 (47%), Gaps = 5/343 (1%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            + + A  R+          +LW +V ++  ++ +       +  +K++  +  +  ++ 
Sbjct: 106 LELEEA-SRIRQ-EEMIRKYNLWDDVTKSNEILGKLADSSKVVDTLKDLTYKAEEAKLIT 163

Query: 74  ELALEED-DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +L   +  +  + ++  +    +   +   +   LL G+ D   A L + AG  G  S+ 
Sbjct: 164 QLVEMDAINHGLFEQAYNASVDVSKFLYQYEMSKLLRGQFDMEGACLTIKAGPRGIYSEI 223

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA  LL MYT+WAEK+ +K   +E +  +  GIKSAT+  +    YG+L GE+GVH ++R
Sbjct: 224 WAEQLLSMYTKWAEKQGYKGRVVEKYASKNGGIKSATIEFESEYGYGYLSGERGVHHMIR 283

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
            S  +S     T  + + V P+  ++      +         +    G     T  AV I
Sbjct: 284 SSDDESILHEQTGSAVVDVIPLFLETAPDLQIDDGDLR--ISSPSCHGVEQGRTGHAVCI 341

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
            HIPTG+ VQ   ERS   NK +A N L+AKL    +++        +       W ++ 
Sbjct: 342 QHIPTGISVQSSGERSHFANKMRALNRLKAKLVVTAMEQGIPEVGGIKREAIADMWKQET 401

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R YV  P ++V+D++T+I+    + VLDG+++  + A +++++
Sbjct: 402 RRYVFHPNKLVQDVKTDIQLPDLNSVLDGNIEPLIGANISMRQ 444


>gi|290982185|ref|XP_002673811.1| predicted protein [Naegleria gruberi]
 gi|284087397|gb|EFC41067.1| predicted protein [Naegleria gruberi]
          Length = 324

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 102/260 (39%), Positives = 146/260 (56%), Gaps = 17/260 (6%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKS 167
              + +++A +E+  G GG E+  +A  L +MY  +A KR +K E L +       G K 
Sbjct: 47  HQISPNSNAIIEIRPGTGGDEASLFAMELFKMYEFYATKRGWKFEVLSLSANNGGEGCKE 106

Query: 168 ATLLIKGPN--------AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
              LI G +         YG +K E GVHR+ R+   +S  R HTS +SI V P V ++ 
Sbjct: 107 GIALISGSSYGDDEGLGVYGCMKFESGVHRVQRVPATESQGRVHTSSASIVVLPEVTEAD 166

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
              I+ +D RIDT RASGAGGQHVNTTDSAVR+THIPTG VV    ERSQH+NK +A+ +
Sbjct: 167 VK-INLADVRIDTMRASGAGGQHVNTTDSAVRLTHIPTGTVVCIADERSQHRNKEKAFKI 225

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPS 336
           L ++LY  + Q+ E+I  +    K +IG G +   IR+Y   P   + D R +  +    
Sbjct: 226 LHSRLY--QKQQDEKIQKMSSERKEQIGSGDRSDKIRTYNF-PQDRITDHRISFSQFGLD 282

Query: 337 DVLDGD-LDDFMKATLAIKK 355
            ++DG+ LD F +     +K
Sbjct: 283 KMMDGEILDSFFEILAKQEK 302


>gi|332375689|gb|AEE62985.1| unknown [Dendroctonus ponderosae]
          Length = 400

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 93/306 (30%), Positives = 153/306 (50%), Gaps = 14/306 (4%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL-- 108
            L   I+ I +  + + + + L ELA   D         +  +        ++       
Sbjct: 77  ELQPVINIITKRDELITNIVDLKELAASPDKDLAALAKEEETELETKLYHLEETLIDALL 136

Query: 109 --SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
               E   +   LEV AG GG E+  +A  +  MY  +   + +K + ++    +  GI+
Sbjct: 137 PEDREDSFDTIILEVQAGVGGQEAMLFAQEMFDMYCSFISLKGWKYDIVDYMGTDLGGIR 196

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
             ++L+ G  AY + K E GVHR+ RI   + +SR HTS  S+   P   + I+I I   
Sbjct: 197 RGSILVNGSKAYKFFKHEGGVHRVQRIPSTEKSSRIHTSTVSVTALPQ-PNEIDIRIDPK 255

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D +I+T R++GAGGQHVNTTDSAVRI H+PT ++V+CQ +RSQ KN+  A   LRA LY+
Sbjct: 256 DLKIETKRSTGAGGQHVNTTDSAVRIVHLPTNIMVECQVDRSQIKNRKLALTKLRALLYQ 315

Query: 287 LELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLR-TNIEKTSPSDVLD-G 341
            EL+++        + K+++    +   IR+Y       + D R + +   +    ++ G
Sbjct: 316 RELEEQLAQQE--STKKSQVSSNNRNEKIRTYNFN-QDRITDHRLSGVHFHNIKMFMETG 372

Query: 342 -DLDDF 346
            DL++ 
Sbjct: 373 ADLEEL 378


>gi|299469865|emb|CBN76719.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 364

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 100/348 (28%), Positives = 171/348 (49%), Gaps = 22/348 (6%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   R   +        +   V E   + +E   L+  +    +++++  +   L E+
Sbjct: 5   LEHMKGRHEEIVESMTKGEV--PVREMGSVGKELGRLEAVLDLQAKVEEKAAEIQDLEEV 62

Query: 76  ALEEDDCSILQETSDNLQRIKLE----------VEYKQFESLLSGEADSNDAYLEVHAGA 125
               +      +   +    +                    L   E DS +A LEV +G+
Sbjct: 63  MQATNAGGAEADREMHGIAKEEHADCTAALEKLRLDLTSLLLPRDEGDSKNALLEVRSGS 122

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  L  MY R+AE + +K E +     +  G + A+  I+G + YG LK E 
Sbjct: 123 GGDEAAAFAKELFEMYRRFAELKGWKFEGMTCSSIDAGGYREASASIRGEDVYGSLKFEN 182

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+    ++ R HTS +S+ V  +  + +++++ +SD R + +RASGAGGQHVNT
Sbjct: 183 GVHRVQRVP--SNSPRLHTSAASVVVM-MEAEEMDLKLEQSDLRFEAFRASGAGGQHVNT 239

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVRITH+PTG+    Q ERSQH NK +A  +LR++++E+   +            + 
Sbjct: 240 TESAVRITHVPTGITASIQDERSQHSNKEKALKVLRSRVFEVRRDEI--ARKEAAVRASA 297

Query: 306 IGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKA 349
           +G G    +IR+Y   P   + D R N  +     ++ G+ L DF++A
Sbjct: 298 VGSGDRSERIRTYNF-PQDRITDHRANYSRHGWEAMMRGEMLGDFLEA 344


>gi|225559538|gb|EEH07820.1| peptide chain release factor 1 [Ajellomyces capsulatus G186AR]
          Length = 438

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 94/368 (25%), Positives = 154/368 (41%), Gaps = 40/368 (10%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           +     S L ++  +     +   A    +    L    + +KE +        L  L  
Sbjct: 51  SIADEHSTLTSRLAE-TF--DPKTA----KRAGELATTATTLKEWEKANESISELNNLLE 103

Query: 78  EEDDCSILQETSDNLQRIKLEV-----EYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +    S L+  +    R             +   +           LE+  GAGG E+  
Sbjct: 104 DPSTDSELRSLALEDLRSAKASLTILSSNLKQTLIPRHPFADLPCLLELRPGAGGEEAGI 163

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-------KSATLLIKGPNAYGWLKGEQ 185
           +AN LLRMYT +   R  +T  L+                  A + I+ P +Y  L+ E 
Sbjct: 164 FANELLRMYTMFCSNRSLRTTLLKKECENAGANGGSEDRLIEAVMEIETPGSYETLRTEA 223

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI--------------EIEISESDCRID 231
           GVHR+ R+   ++  R HTS  S+ + P    +I              +  I   +  ++
Sbjct: 224 GVHRVQRVPTTENKGRTHTSAVSVVILPSFSSNIGEGDSELNFDDPNSDYYIDPQEVNVE 283

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
             RA GAGGQHVN T+SA+R+THIPTG+VV  Q  RSQH+N+ +AW++LRA++ +   + 
Sbjct: 284 KMRAGGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWHLLRARIAQQRREA 343

Query: 292 REEIANIGE----SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDD 345
           REE              ++G G +IR+Y         D R+ +   +   +++G   L+ 
Sbjct: 344 REEEMVKLRRGVMGGVAKMGRGDKIRTYNFG-QNRCTDHRSGLTLHNLGSIMEGGDGLEK 402

Query: 346 FMKATLAI 353
            M +    
Sbjct: 403 IMDSVRGW 410


>gi|56203458|emb|CAI18897.1| mitochondrial translational release factor 1-like [Homo sapiens]
          Length = 231

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 88/200 (44%), Positives = 114/200 (57%), Gaps = 9/200 (4%)

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E+  G   G++ A+  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P  
Sbjct: 19  EVTAGVGGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQ- 77

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
              I + I+  D RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  
Sbjct: 78  PTEINLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKEL 137

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEK 332
           A   LRAKLY + L+  EEI     + K +I   G   +IR+Y   P   V D R N   
Sbjct: 138 AMTKLRAKLYSMHLE--EEINKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKTL 194

Query: 333 TSPSDVLDGD--LDDFMKAT 350
                 + GD  LD+ +++ 
Sbjct: 195 HDLETFMQGDYLLDELVQSL 214


>gi|148703820|gb|EDL35767.1| mitochondrial translational release factor 1, isoform CRA_b [Mus
           musculus]
          Length = 440

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 96/337 (28%), Positives = 152/337 (45%), Gaps = 20/337 (5%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           ++  +    L+   +   + +N  + + L R    L    +  +EIQ+       L  L 
Sbjct: 99  EDLNKEYQTLDQCLQ--GISENEGDRRALHRRHAQLAPLAAVYQEIQEAEQAIEELESLC 156

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFES-------LLSGEADSNDAYLEVHAG--AGG 127
              +     Q      +  ++  +             +   + D +D  LEV +G   GG
Sbjct: 157 KSLNKQDEKQLQELVSEERQIIDQKIHRLYSELLERLVPKEKYDWSDVILEVTSGRTTGG 216

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + +K E L     +  G+  A   I G + Y  LK E G+
Sbjct: 217 DICQQFTREIFDMYQNYSYYKHWKFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 276

Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           HR+ RI     +SR     + +   +     D +++++   D R+DT+RA GAGGQHVNT
Sbjct: 277 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKVDPKDLRVDTFRARGAGGQHVNT 336

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+ HIPTG+VV+CQQERSQ KNK  A  +LRA+LY+  ++K           K +
Sbjct: 337 TDSAVRLVHIPTGLVVECQQERSQLKNKEIALRVLRARLYQQIIEKDRCQQQNA--RKLQ 394

Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           +G      +IR+Y       V D R   E      V+
Sbjct: 395 VGTRAQSERIRTYNF-TQDRVTDHRIAYEVRDI-KVM 429


>gi|332213669|ref|XP_003255947.1| PREDICTED: peptide chain release factor 1-like, mitochondrial
           isoform 3 [Nomascus leucogenys]
          Length = 344

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 106/305 (34%), Positives = 138/305 (45%), Gaps = 45/305 (14%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            L   I  + E +  L +   LL    E+       E +   + I           + S 
Sbjct: 63  ELLAVIKLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D ND  LEV AG GG                                    G++ A+ 
Sbjct: 123 ETDENDLILEVTAGVGG------------------------------------GLRHASA 146

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P     I + I+  D RI
Sbjct: 147 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQ-PTEINLVINPKDLRI 205

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  A   LRAKLY + L+
Sbjct: 206 DTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLE 265

Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345
             EE      + K +I   G   +IR+Y   P   V D R N         + GD  LD+
Sbjct: 266 --EETNKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINRTLHDLETFMQGDYLLDE 322

Query: 346 FMKAT 350
            +++ 
Sbjct: 323 LVQSL 327


>gi|195116636|ref|XP_002002858.1| GI17608 [Drosophila mojavensis]
 gi|193913433|gb|EDW12300.1| GI17608 [Drosophila mojavensis]
          Length = 393

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 98/312 (31%), Positives = 154/312 (49%), Gaps = 11/312 (3%)

Query: 48  ERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
               LD  ++ +++ +    +     +L  E+D+        +N     L  + ++    
Sbjct: 57  RLTRLDPVVNSLEKHRALQRNITSEKDLLAEKDEDMRALMEEENNVYTSLLRKQEEDMLQ 116

Query: 108 ----LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
               LS + D      EV+AGAGG E+  +A  L  MYT + +   ++ E  +    +  
Sbjct: 117 ELLALSDDEDYPAVIFEVNAGAGGQEAMLFAQELYDMYTSYFDHMGWEYEEFDRETTDIG 176

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G++ A L +  P AY WL+ E GVHR+ R+   + + R HTS +SI V P     ++++I
Sbjct: 177 GLRHANLQVNDPEAYNWLRFEAGVHRVQRVPATEKSGRIHTSTASITVIP-RPADVQVQI 235

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +E D +I+T RASGAGGQHVNTTDSAVRI H+P+G+ V+ Q ERSQ KN+  A   L+AK
Sbjct: 236 AERDLKIETKRASGAGGQHVNTTDSAVRIVHLPSGLAVESQSERSQLKNREVALKRLQAK 295

Query: 284 LYELELQKREEIANIGE-SSKTEIGWGRQIRSYVLQPYQMVKDLRT--NIEKTSPSDVLD 340
           L   +LQ  E        + +  +    +IR+Y       V D R        +    L+
Sbjct: 296 LIHQQLQSAEATKKATRKAQQGNLNRNEKIRTYNFV-QDRVTDHRVQQGGTLHNLPGFLE 354

Query: 341 G--DLDDFMKAT 350
           G   L   ++  
Sbjct: 355 GGQQLSGLIERL 366


>gi|194387338|dbj|BAG60033.1| unnamed protein product [Homo sapiens]
          Length = 344

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 107/305 (35%), Positives = 139/305 (45%), Gaps = 45/305 (14%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            L   I  + E +  L +   LL    E+       E +   + I           + S 
Sbjct: 63  ELLAVIKLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D ND  LEV AG GG                                    G++ A+ 
Sbjct: 123 ETDENDLILEVTAGVGG------------------------------------GLRHASA 146

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P     I + I+  D RI
Sbjct: 147 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQ-PTEINLVINPKDLRI 205

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  A   LRAKLY + L+
Sbjct: 206 DTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLE 265

Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345
             EEI     + K +I   G   +IR+Y   P   V D R N         + GD  LD+
Sbjct: 266 --EEINKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLLDE 322

Query: 346 FMKAT 350
            +++ 
Sbjct: 323 LVQSL 327


>gi|328463686|gb|EGF35274.1| peptide chain release factor 1 [Lactobacillus rhamnosus MTCC 5462]
          Length = 198

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 75/193 (38%), Positives = 113/193 (58%), Gaps = 7/193 (3%)

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           K   ++I G N Y  LK E G HR+ R+   +S  R HTS +++ V P   D ++++I  
Sbjct: 1   KEVVVMITGDNVYSKLKYENGAHRVQRVPVTESAGRVHTSTATVGVMP-EYDEVDLKIDP 59

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D R D YR+SGAGGQHVN T SAVR+THIPTG+VV  Q ERSQ +N+A+A  +LR+++Y
Sbjct: 60  KDIRTDVYRSSGAGGQHVNKTSSAVRMTHIPTGIVVSMQDERSQQENRARAMQILRSRVY 119

Query: 286 ELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           +    + +E     ++ K  IG G    +IR+Y   P   V D R  +       +++G+
Sbjct: 120 DYYETENQE--KYDQNRKNAIGTGDRSERIRTYNY-PQNRVTDHRIGLTLNKLDRIMNGE 176

Query: 343 LDDFMKATLAIKK 355
           LD+ + A +   +
Sbjct: 177 LDEIIDALIVHDQ 189


>gi|121727222|ref|ZP_01680389.1| peptide chain release factor 1 [Vibrio cholerae V52]
 gi|121630467|gb|EAX62860.1| peptide chain release factor 1 [Vibrio cholerae V52]
          Length = 193

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 78/184 (42%), Positives = 115/184 (62%), Gaps = 6/184 (3%)

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             AYG LK E G HR+ R+   ++  R HTS  ++ V P + ++   EI  SD +IDT+R
Sbjct: 2   DGAYGTLKFESGGHRVQRVPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFR 61

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A++ + E  KR  
Sbjct: 62  SSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAA 121

Query: 295 IANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
              I ++ +  +G G    +IR+Y   P   V D R N+     ++V++GD+   +   +
Sbjct: 122 E--ISDTRRNLLGSGDRSDRIRTYNY-PQGRVSDHRINLTVYRLTEVMEGDMQSLIDPVI 178

Query: 352 AIKK 355
              +
Sbjct: 179 HEHQ 182


>gi|71028468|ref|XP_763877.1| peptide chain release factor 2 [Theileria parva strain Muguga]
 gi|68350831|gb|EAN31594.1| peptide chain release factor 2, putative [Theileria parva]
          Length = 376

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 91/275 (33%), Positives = 143/275 (52%), Gaps = 18/275 (6%)

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK----- 149
            KL+   K  E   + + D N   L + +G GG+ES DW  +L  MY ++          
Sbjct: 65  CKLKDSNKSAELDPTRKYDRNYCKLIIKSGVGGSESFDWCRILAEMYKKFISSYDPPPGP 124

Query: 150 -----FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHT 204
                 + + +++  G   G +     + G  AY  LKGE G HRL+R SP++S+ +R T
Sbjct: 125 NLPTSLRLKEVDVCPGTSGGFRRVEYDVIGDYAYRLLKGENGTHRLIRNSPFNSDHKRQT 184

Query: 205 SFSSIWVYPVVDDSI--------EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           +F+++   P++ D+           +I + D  I++ R+SG GGQ+VN  ++AVR+ H P
Sbjct: 185 TFATVQAVPILSDTDEEIINFKKNRQILKKDLIIESMRSSGKGGQNVNKVETAVRVYHKP 244

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316
           TG+ V+ QQER+  +N+  A  ML   + E  L+K  E  +  + +     WG  IR+Y 
Sbjct: 245 TGLSVKVQQERTNTQNREIAIRMLTKLVDEHYLKKLNEKLDDIKGADLVGTWGSHIRTYT 304

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           L P Q VKD RTN E    ++VL+GDL   +   L
Sbjct: 305 LNPEQRVKDHRTNFETAKATNVLNGDLLPIILNLL 339


>gi|297679454|ref|XP_002817545.1| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           isoform 2 [Pongo abelii]
          Length = 344

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 106/305 (34%), Positives = 138/305 (45%), Gaps = 45/305 (14%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            L   I  + E +  L +   LL    E+       E +   + I           + S 
Sbjct: 63  ELLAVIKLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D ND  LEV AG GG                                    G++ A+ 
Sbjct: 123 ETDENDLILEVTAGVGG------------------------------------GLRQASA 146

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P     I + I+  D RI
Sbjct: 147 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQ-PTEINLVINPKDLRI 205

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  A   LRAKLY + L+
Sbjct: 206 DTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLE 265

Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345
             EE      + K +I   G   +IR+Y   P   V D R N         + GD  LD+
Sbjct: 266 --EETNKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKTLHDLETFMRGDYLLDE 322

Query: 346 FMKAT 350
            +++ 
Sbjct: 323 LVQSL 327


>gi|121591760|ref|ZP_01678968.1| peptide chain release factor 1 [Vibrio cholerae 2740-80]
 gi|121546377|gb|EAX56631.1| peptide chain release factor 1 [Vibrio cholerae 2740-80]
          Length = 242

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 72/234 (30%), Positives = 112/234 (47%), Gaps = 3/234 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72
            ++ V+R   +     DP +  +  + + L +E   L+      +  Q    D      +
Sbjct: 9   LESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +    E       E       I+   +  Q   L     D  + +LE+ AGAGG E+  
Sbjct: 69  AQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +A  L RMY+R+AEK+ ++ E +   + E  G K     + G  AYG LK E G HR+ R
Sbjct: 129 FAGDLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +   ++  R HTS  ++ V P + ++   EI  SD +IDT+R+SGAGGQHVNTT
Sbjct: 189 VPATEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTT 242


>gi|114609865|ref|XP_001140693.1| PREDICTED: mitochondrial translational release factor 1-like
           isoform 4 [Pan troglodytes]
          Length = 344

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 106/305 (34%), Positives = 138/305 (45%), Gaps = 45/305 (14%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            L   I  + E +  L +   LL    E+       E +   + I           + S 
Sbjct: 63  ELLAVIRLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D ND  LEV AG GG                                    G++ A+ 
Sbjct: 123 ETDENDLILEVTAGVGG------------------------------------GLRHASA 146

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P     I + I+  D RI
Sbjct: 147 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQ-PTEINLVINPKDLRI 205

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  A   LRAKLY + L+
Sbjct: 206 DTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLE 265

Query: 291 KREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDD 345
             EE      + K +I   G   +IR+Y   P   V D R N         + GD  LD+
Sbjct: 266 --EETNKRQNARKIQIGSKGRSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGDYLLDE 322

Query: 346 FMKAT 350
            +++ 
Sbjct: 323 LVQSL 327


>gi|218297203|ref|ZP_03497865.1| Class I peptide chain release factor [Thermus aquaticus Y51MC23]
 gi|218242480|gb|EED09019.1| Class I peptide chain release factor [Thermus aquaticus Y51MC23]
          Length = 176

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 85/163 (52%), Positives = 108/163 (66%), Gaps = 1/163 (0%)

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           R SP+D++ RRHTSF+ + V P VDD++E+ I   D RID +R+ G GGQ VNTTDSAVR
Sbjct: 2   RPSPFDASGRRHTSFAGVEVMPEVDDTVEVVIRPEDLRIDVFRSQGHGGQGVNTTDSAVR 61

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           I H+PTG+ V CQ  RSQ KNK  A  +LR++L+ELE +K++E           I WG Q
Sbjct: 62  IVHLPTGITVTCQTTRSQIKNKELALKVLRSRLFELEWKKKQEELQKLRGEVRPIEWGSQ 121

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           IRSYVL     VKD RT + +  P +VLDGDL DF+ A L  K
Sbjct: 122 IRSYVLDKQ-YVKDHRTGLMRFDPQNVLDGDLMDFIWAGLEWK 163


>gi|302811530|ref|XP_002987454.1| hypothetical protein SELMODRAFT_426218 [Selaginella moellendorffii]
 gi|300144860|gb|EFJ11541.1| hypothetical protein SELMODRAFT_426218 [Selaginella moellendorffii]
          Length = 505

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 102/313 (32%), Positives = 166/313 (53%), Gaps = 16/313 (5%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLILLELALEEDDCSILQETSDN 91
              +  +   + +E ++LD ++  IK ++ +  +      L++ ++E+++   L      
Sbjct: 17  FHAHGEKLIKMNKELRNLDYSVDMIKALRAKEKEVIGLKELVKESVEDEEMRRLASGELQ 76

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
               ++          L  + +++        GAGG E+  +A+ L +MY ++A    ++
Sbjct: 77  TATREVRDAQHDVLLELIPKDEADSR------GAGGDEASIFASDLFKMYEKYAANNSWR 130

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            E L I   +    K A+  I G   YG LK E GVHR+ R+   +   R HTS +S+ +
Sbjct: 131 FEVLSITTTDTRCYKEASAAISGDGVYGALKFESGVHRVQRVPVTEKAGRIHTSTASVAI 190

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P   + I++EI   + +IDTYRA GAGGQHVNTT SAVR+TH PTG+VV  Q ERSQHK
Sbjct: 191 LP-EANEIDVEIRNDEIKIDTYRAGGAGGQHVNTTCSAVRVTHAPTGIVVAIQDERSQHK 249

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRT 328
           NKA+A ++L A+LYELE  +    A+  E  + +IG      +IR+Y   P   V D R 
Sbjct: 250 NKAKALSILYARLYELERSR--AAASRSELRQDQIGSSDRSERIRTYNF-PQGRVTDRRV 306

Query: 329 NIEKTSPSDVLDG 341
            + + +   +++G
Sbjct: 307 GVTQHAIEQIMEG 319


>gi|164660096|ref|XP_001731171.1| hypothetical protein MGL_1354 [Malassezia globosa CBS 7966]
 gi|159105071|gb|EDP43957.1| hypothetical protein MGL_1354 [Malassezia globosa CBS 7966]
          Length = 395

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 95/345 (27%), Positives = 154/345 (44%), Gaps = 37/345 (10%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
            +  + L+         +++L        L   E D  +L+     L +++ E + +   
Sbjct: 36  SQRIKDLEAVHKTWSAWREQLQCVQDTQRLCETEKDKDMLEMAEQELSQMRDEADARHEA 95

Query: 106 SLLSGEADSNDAY-----LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
                 ++S         +E+  G GG ES  +   +LRMY ++ E R  K +  +    
Sbjct: 96  LKQQILSNSRSIQSKGAIMELRQGVGGQESCLFLGEMLRMYIKFCETRAQKAQDEDDPSM 155

Query: 161 EEAGI----------------------KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
             AG                       + A L I GPNA+  L+ E GVHR+ RI    +
Sbjct: 156 LGAGWSTDLLSATPVDVSATSGAGDAYREAILQIHGPNAFEALRFEAGVHRVQRIPATQN 215

Query: 199 NSRRHTSFSSIWVYPVVDDSI--EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
             +  TS  +I V P+  ++   +  +   D R++T RA GAGGQHVN T+SAVR+TH P
Sbjct: 216 LGKLQTSTMAIIVLPMQAENDVSKDIVDSKDVRVETMRARGAGGQHVNRTESAVRLTHDP 275

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQIRSY 315
           +G+ V  Q  RSQH+N+ +AW++LRA+L ++ LQK          S+        ++R+Y
Sbjct: 276 SGITVSMQDSRSQHQNRVKAWDVLRARLLDIHLQKEASENRALRRSQVASAERSERVRTY 335

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGD------LDDFMKATLAIK 354
              P   V D R  I  +     +DGD      L   ++  +A +
Sbjct: 336 NF-PQDRVTDHRIGISLSDIHRFMDGDDSSGTGLSYLIEELMARE 379


>gi|297304301|ref|XP_001086824.2| PREDICTED: peptide chain release factor 1-like, mitochondrial-like,
           partial [Macaca mulatta]
          Length = 346

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 90/259 (34%), Positives = 126/259 (48%), Gaps = 5/259 (1%)

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
            + E E ++ E LL  E +      E        E     + ++ +     E  + + + 
Sbjct: 73  NEKEQELRETEPLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSEETDENELQD 132

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           LE    E  G++ A+  I G  AY  +K E GVHR+ R+       R HTS  ++ + P 
Sbjct: 133 LEYFPSEIGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTQKQGRIHTSTMTVAILPQ 192

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
               I + I+  D RIDT +ASGAGGQHVNTTDSAVRI H+PT VV +CQQERSQ KN+ 
Sbjct: 193 -PTEINLVINPKDLRIDTKQASGAGGQHVNTTDSAVRIVHLPTSVVSKCQQERSQLKNRE 251

Query: 275 QAWNMLRAKLYELELQKREEIANIGES-SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
            A   LRAKLY + L+K                G   +IR+Y   P   V D R +    
Sbjct: 252 LAMTKLRAKLYSMHLEKETNKRQNARKIRIGSKGRSEKIRTYNF-PQNRVTDHRISKTLH 310

Query: 334 SPSDVLDGD--LDDFMKAT 350
                + GD  LD+ +++ 
Sbjct: 311 DLETFMQGDDLLDELVQSL 329


>gi|72071048|ref|XP_793802.1| PREDICTED: similar to Mitochondrial translational release factor
           1-like [Strongylocentrotus purpuratus]
 gi|115937039|ref|XP_001184371.1| PREDICTED: similar to Mitochondrial translational release factor
           1-like [Strongylocentrotus purpuratus]
          Length = 298

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 93/256 (36%), Positives = 140/256 (54%), Gaps = 9/256 (3%)

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             L S E D ND  +E  AG GG E+  +A  +  MY R+A  R +    LE    +  G
Sbjct: 27  LLLPSEETDDNDVIMEFTAGVGGQEAMLFAADMFEMYQRFAAYRGWTFSVLEYFTTDMGG 86

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++ A++ + G  AY  L+ E GVHR+ R+   +S  R HTS  +I V P     I++++ 
Sbjct: 87  LRHASVSMSGDQAYLLLRQEAGVHRVQRVPRTESKGRIHTSTMAIAVLP-QPKEIDLKLD 145

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
             D R++T +ASGAGGQHVNTTDSAVRITH+PTG+  + QQERSQHKN+  A  ML+ ++
Sbjct: 146 PKDLRVETKKASGAGGQHVNTTDSAVRITHLPTGISAESQQERSQHKNRFIAMTMLQTRI 205

Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           Y   L   ++ ++      +++G G    +IR+Y  Q    + D R         + L G
Sbjct: 206 YNRILA--DQTSSERSIRSSQVGTGGRSEKIRTYNYQ-QDRITDHRRGRTVHGVPEYLLG 262

Query: 342 D--LDDFMKATLAIKK 355
              LD+ + + +   +
Sbjct: 263 SELLDEMVTSCVEGDQ 278


>gi|213581389|ref|ZP_03363215.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 197

 Score =  143 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 77/182 (42%), Positives = 113/182 (62%), Gaps = 6/182 (3%)

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             I G   YG LK E G HR+ R+   +S  R HTS  ++ V P + ++   +I+ +D R
Sbjct: 1   AKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLR 60

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           IDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E 
Sbjct: 61  IDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAET 120

Query: 290 QKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            KR++      + +  +G G    + R+Y   P   V D R N+      + ++G LD  
Sbjct: 121 AKRQQ--AEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDML 177

Query: 347 MK 348
           ++
Sbjct: 178 IE 179


>gi|302759769|ref|XP_002963307.1| hypothetical protein SELMODRAFT_405091 [Selaginella moellendorffii]
 gi|300168575|gb|EFJ35178.1| hypothetical protein SELMODRAFT_405091 [Selaginella moellendorffii]
          Length = 622

 Score =  142 bits (357), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 97/332 (29%), Positives = 159/332 (47%), Gaps = 24/332 (7%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           +   R + L+    +P +     +   + +E ++LD ++  IK ++ +  + + L EL  
Sbjct: 53  SIEDRHACLSKALLEPGIAS--EKLIKMNKELRNLDYSVDMIKALRAKEKEVIGLKELVK 110

Query: 78  EEDDCSILQET-----SDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           E  +   ++           + ++        E +   EADS    LE          + 
Sbjct: 111 ESVEDEEMRRLASGELQTATREVRDAQHDVLLELIPKDEADSRGYILEELEVTKRQFLRL 170

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
            ++    ++    E      E  +      +G             YG LK E GVHR+ R
Sbjct: 171 ISSRCRHVFLVHVECLLDFYECSQEASAVISG----------DGVYGALKFESGVHRVQR 220

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +   R HTS +S+ + P   + +++EI   + +IDTYRA GAGGQHVNTT SAVR+
Sbjct: 221 VPVTEKAGRIHTSTASVAILP-EANEVDVEIRNDEIKIDTYRAGGAGGQHVNTTCSAVRV 279

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WG 309
           TH PTG+VV  Q ERSQHKNKA+A ++L A+LYELE  +   +A+  E  + +IG     
Sbjct: 280 THAPTGIVVAIQDERSQHKNKAKALSILYARLYELERSR--AVASRSELRQDQIGSSDRS 337

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
            +IR+Y   P   V D R  + + +   +++G
Sbjct: 338 ERIRTYNF-PQGRVTDHRVGVTQHAIEQIMEG 368


>gi|300175228|emb|CBK20539.2| unnamed protein product [Blastocystis hominis]
          Length = 299

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 89/268 (33%), Positives = 135/268 (50%), Gaps = 6/268 (2%)

Query: 91  NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKF 150
               I L        +L +   D  +  +EV AGAGG E+  +   ++ MY  +   + +
Sbjct: 22  EANIISLPSNKYCCITLFTPREDHKNCTIEVRAGAGGAEACLFTEDIMNMYKNYCSLKDW 81

Query: 151 KTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
           K   L  +     GIK A + I G  ++G L+ E GVHR+ R+   +S  R HTS  ++ 
Sbjct: 82  KWSVLSCNAPTGGGIKEAIIKITGEGSFGVLRTESGVHRVQRVPETESQGRIHTSTMTVA 141

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           V P V++   + I  SD RID +R+SG GGQHVN T+SAVRITH+PTG+VV  Q ER+QH
Sbjct: 142 VLPEVENMETL-IRPSDLRIDLFRSSGKGGQHVNKTESAVRITHLPTGIVVSNQDERNQH 200

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKT---EIGWGRQIRSYVLQPYQMVKDLR 327
            NKA+A  +L  +L   +     E  +    S     +     + R+Y   P   + D R
Sbjct: 201 MNKAKAMQILAIRLQNRQNSLFNEEIDSERRSYPFAFDWARCEKNRTYNY-PNSRITDHR 259

Query: 328 TNIEKTSPSDVLDGD-LDDFMKATLAIK 354
             +       +++G+ LD+F  A    +
Sbjct: 260 IGLTLYGMDKMMNGELLDEFAVALKQWR 287


>gi|303287338|ref|XP_003062958.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226455594|gb|EEH52897.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 294

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 105/258 (40%), Positives = 146/258 (56%), Gaps = 11/258 (4%)

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
             L S +AD   A LE+ AGAGG E+  +A  L RMY  +A +R +  E +     +E G
Sbjct: 34  LLLPSDDADDGGAILEIRAGAGGDEAARFAANLARMYDMFARRRGWTFERMTATTTDEGG 93

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN--SRRHTSFSSIWVYPVVDDSIEIE 222
            K  T  + G + YG LK E GVHR VR     S    + HTS +S+ V P   + +E++
Sbjct: 94  YKDVTFNVSGDDVYGTLKYESGVHRRVRRVQRVSGDEGKVHTSTASVAVMPH-AEEVELD 152

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + + D RIDT RASGAGGQHVNTT+SAVR+TH+P+G VV    ERSQHKNK +A+ +LRA
Sbjct: 153 LRDEDVRIDTMRASGAGGQHVNTTNSAVRLTHVPSGTVVVMMDERSQHKNKEKAFKILRA 212

Query: 283 KLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           ++Y  E  + E      +  K+ IG G    ++R+Y  +    VKD R N +      +L
Sbjct: 213 RIY--EGLRAEAHRERADQRKSLIGSGDRSERVRTYNYKD-GRVKDHRVNAQVNDLEGLL 269

Query: 340 DG--DLDDFMKATLAIKK 355
           +G   L D + A    +K
Sbjct: 270 NGGDALSDIVDALRTEEK 287


>gi|125984748|ref|XP_001356138.1| GA19071 [Drosophila pseudoobscura pseudoobscura]
 gi|54644457|gb|EAL33198.1| GA19071 [Drosophila pseudoobscura pseudoobscura]
          Length = 392

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 92/300 (30%), Positives = 146/300 (48%), Gaps = 8/300 (2%)

Query: 48  ERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR----IKLEVEYKQ 103
               L+  ++ +++ +    +     ++  E+D+        +N        K E    Q
Sbjct: 58  RLSQLEGVVNALEQRRVLERNITSAKDIEQEKDEDMRKLMEEENEVYADLLSKQEQTMLQ 117

Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
               L+ +         V+AGAGG E+  +A  L  MYT + E   ++ E       +  
Sbjct: 118 ELLALADDEVYPALIFGVNAGAGGQEAMLFAQELFEMYTSYFEHMGWEYEEFARETTDIG 177

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G++ A +++ G +A+ WL+ E GVHR+ R+   +   R HTS  SI V P     + + I
Sbjct: 178 GLRHANVMVNGADAFHWLRFEAGVHRVQRVPATEKAGRMHTSTVSITVIP-RPADVHVHI 236

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +E D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+  A   L+A+
Sbjct: 237 AEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELALKRLQAR 296

Query: 284 LYELELQKREEIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDG 341
           L + +L+  E       ++ +  +    +IR+Y       V D R       +    L G
Sbjct: 297 LVQQQLESSEASKQATKKAQQGSLNRNEKIRTYNFV-QDRVTDHRIQGGTLHNLDGFLKG 355


>gi|297739884|emb|CBI30066.3| unnamed protein product [Vitis vinifera]
          Length = 414

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 89/343 (25%), Positives = 168/343 (48%), Gaps = 6/343 (1%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            + + A  R+          +LW +V ++  ++ +       +  +K++  +  +  ++ 
Sbjct: 71  LELEEA-SRIRQ-EEMIRKYNLWDDVTKSNEILGKLADSSKVVDTLKDLTYKAEEAKLIT 128

Query: 74  ELALEED-DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +L   +  +  + ++  +    +   +   +   LL G+ D   A L + AG  G  S+ 
Sbjct: 129 QLVEMDAINHGLFEQAYNASVDVSKFLYQYEMSKLLRGQFDMEGACLTIKAGPRGIYSEI 188

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA  LL MYT+WAEK+ +K   +E +  +  GIKSAT+  +    YG+L GE+GVH ++R
Sbjct: 189 WAEQLLSMYTKWAEKQGYKGRVVEKYASKNGGIKSATIEFESEYGYGYLSGERGVHHMIR 248

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
            S  +S      S     +   ++ + +++I + D RI    +    G     T  AV I
Sbjct: 249 SSDDESILHETGSAVVDVIPLFLETAPDLQIDDGDLRI---SSPSCHGVEQGRTGHAVCI 305

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
            HIPTG+ VQ   ERS   NK +A N L+AKL    +++        +       W ++ 
Sbjct: 306 QHIPTGISVQSSGERSHFANKMRALNRLKAKLVVTAMEQGIPEVGGIKREAIADMWKQET 365

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R YV  P ++V+D++T+I+    + VLDG+++  + A +++++
Sbjct: 366 RRYVFHPNKLVQDVKTDIQLPDLNSVLDGNIEPLIGANISMRQ 408


>gi|225441347|ref|XP_002274658.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 417

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 89/343 (25%), Positives = 168/343 (48%), Gaps = 6/343 (1%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            + + A  R+          +LW +V ++  ++ +       +  +K++  +  +  ++ 
Sbjct: 74  LELEEA-SRIRQ-EEMIRKYNLWDDVTKSNEILGKLADSSKVVDTLKDLTYKAEEAKLIT 131

Query: 74  ELALEED-DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +L   +  +  + ++  +    +   +   +   LL G+ D   A L + AG  G  S+ 
Sbjct: 132 QLVEMDAINHGLFEQAYNASVDVSKFLYQYEMSKLLRGQFDMEGACLTIKAGPRGIYSEI 191

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA  LL MYT+WAEK+ +K   +E +  +  GIKSAT+  +    YG+L GE+GVH ++R
Sbjct: 192 WAEQLLSMYTKWAEKQGYKGRVVEKYASKNGGIKSATIEFESEYGYGYLSGERGVHHMIR 251

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
            S  +S      S     +   ++ + +++I + D RI    +    G     T  AV I
Sbjct: 252 SSDDESILHETGSAVVDVIPLFLETAPDLQIDDGDLRI---SSPSCHGVEQGRTGHAVCI 308

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
            HIPTG+ VQ   ERS   NK +A N L+AKL    +++        +       W ++ 
Sbjct: 309 QHIPTGISVQSSGERSHFANKMRALNRLKAKLVVTAMEQGIPEVGGIKREAIADMWKQET 368

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           R YV  P ++V+D++T+I+    + VLDG+++  + A +++++
Sbjct: 369 RRYVFHPNKLVQDVKTDIQLPDLNSVLDGNIEPLIGANISMRQ 411


>gi|296203802|ref|XP_002749048.1| PREDICTED: peptide chain release factor 1, mitochondrial
           [Callithrix jacchus]
          Length = 488

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 101/393 (25%), Positives = 162/393 (41%), Gaps = 63/393 (16%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +N  +    L    +  H   N  + + L R +  L    +  +EIQ+       L  + 
Sbjct: 81  ENLHKESQTLEQCLQ--HFSVNEEKRRSLNRRQAELAPLAAVYQEIQEAEQAIEELESMC 138

Query: 77  LEEDDCSILQETSD------------------------------NLQRIKLEVEYKQFES 106
                 ++                                      ++ + +++    E 
Sbjct: 139 KSRQGSALWPRLECSGAVITDCSLNLPGSSDPPASASQVAGTTGLNKQDEKQLQELALEE 198

Query: 107 L-------------------LSGEADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWA 145
                                  + D ND  LEV +G   GG   Q +   +  MY  ++
Sbjct: 199 RQTLVQKINMLYSELFQSLVPKEKYDKNDVILEVTSGKTTGGDICQQFTREIFDMYQNYS 258

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH-- 203
             + ++ E L     +  G+  A   I G + Y  LK E G+HR+ RI     +SR    
Sbjct: 259 CYKHWQFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQRI 318

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
            + +   +     D +++++   D RIDT+RA GAGGQHVNTTDSAVR+ HIPTG+VV+C
Sbjct: 319 HTGTMSVIILPQPDEVDVKLDPKDLRIDTFRARGAGGQHVNTTDSAVRLVHIPTGLVVEC 378

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320
           QQERSQ +NK  A ++LRA+LY+  ++K         + K ++G G    +IR+Y     
Sbjct: 379 QQERSQIRNKEIALSVLRARLYQQIIEKN--KCQQHSTRKLQVGTGAQSERIRTYNF-TQ 435

Query: 321 QMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351
             V D R   E     + + G   LD  ++  L
Sbjct: 436 DRVTDHRIAYEVRDIKEFVCGGKALDQLIQRLL 468


>gi|189191194|ref|XP_001931936.1| peptide chain release factor 1 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187973542|gb|EDU41041.1| peptide chain release factor 1 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 321

 Score =  141 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 90/268 (33%), Positives = 135/268 (50%), Gaps = 22/268 (8%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE---ALEIHDGEEA 163
           +           LE+  GAGG+E+  +A  L RMY  +  +  F+T       I+   EA
Sbjct: 38  VPVHPFAHLPCLLEIRPGAGGSEAAIFAGDLFRMYMAFCNRNGFRTNLLKYENINGTTEA 97

Query: 164 GI--KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-------- 213
           G+    A + ++  NAYG  + E GVHR+ R+   ++  R HTS +S+ V P        
Sbjct: 98  GVPLSEAIMEVENENAYGVFRCEAGVHRVQRVPATETKGRTHTSAASVHVLPSLQENSAE 157

Query: 214 ---VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
                +   +  I   + +++  RASGAGGQHVN T+SAVR+TH+PT  VV  Q  RSQH
Sbjct: 158 EQDFDNPESDYYIDPKEVKLEVMRASGAGGQHVNKTESAVRLTHMPTNTVVAMQDSRSQH 217

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESS---KTEIGWGRQIRSYVLQPYQMVKDLR 327
           KNK +AW +LRA++ +   +KREE       S      +G G ++R+Y     Q V D R
Sbjct: 218 KNKEKAWALLRARIAQTRREKREEEMANMRRSVIGVARMGRGDKVRTYNWG-QQRVTDHR 276

Query: 328 TNIEKTSPSDVLDGD--LDDFMKATLAI 353
           +        DV+ G   L+  M++  + 
Sbjct: 277 SGTTVHDLDDVMGGGQTLEKVMESVRSW 304


>gi|195472530|ref|XP_002088553.1| GE18626 [Drosophila yakuba]
 gi|194174654|gb|EDW88265.1| GE18626 [Drosophila yakuba]
          Length = 392

 Score =  141 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 93/316 (29%), Positives = 153/316 (48%), Gaps = 10/316 (3%)

Query: 48  ERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI----KLEVEYKQ 103
               L+  +S +++ +          ++  E+D+        +N   +    K +    Q
Sbjct: 58  RLAQLEGVVSALEQRRVLERHITSAKDMEAEKDEDMRELMREENEVYVDLLGKQDQALLQ 117

Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
               LS +         ++AGAGG E+  +A  L  MYT + +   +  E       +  
Sbjct: 118 ELLTLSDDEQYPALIFGLNAGAGGQEAMLFAQELYEMYTGYFDHMGWNWEEFAGESTDIG 177

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G++ A+L++ G +A+ WL+ E GVHR+ R+   + + R HTS +SI V P     I++ I
Sbjct: 178 GLRHASLMVSGEDAFRWLRFEAGVHRVQRVPATEKSGRMHTSTASITVIP-RPADIQVHI 236

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +E D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+  A   LR++
Sbjct: 237 AEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMKRLRSR 296

Query: 284 LYELELQKREEIA-NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDG 341
           L + +L+  E       ++ +  +    +IR+Y       + D R       +    L G
Sbjct: 297 LVQQQLESVEANKMATKKAQQGSLNRNEKIRTYNFV-QDRITDHRIQGGTLHNLDGFLKG 355

Query: 342 --DLDDFMKATLAIKK 355
              L   ++      +
Sbjct: 356 GDQLSGLIEKLQMEHR 371


>gi|213162329|ref|ZP_03348039.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
          Length = 194

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 129/193 (66%), Positives = 154/193 (79%)

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
           D YL++ AG+GGTE+QDWA+MLLRMY RWAE R FKTE +E  +GE AGIKSAT+ I G 
Sbjct: 2   DCYLDIQAGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            AYGWL+ E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRA
Sbjct: 62  YAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRA 121

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SGAGGQHVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+   
Sbjct: 122 SGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAE 181

Query: 296 ANIGESSKTEIGW 308
               E +K++IGW
Sbjct: 182 KQAMEDTKSDIGW 194


>gi|19921226|ref|NP_609617.1| CG5705 [Drosophila melanogaster]
 gi|7298021|gb|AAF53262.1| CG5705 [Drosophila melanogaster]
 gi|16769148|gb|AAL28793.1| LD18447p [Drosophila melanogaster]
 gi|220943136|gb|ACL84111.1| CG5705-PA [synthetic construct]
 gi|220953196|gb|ACL89141.1| CG5705-PA [synthetic construct]
          Length = 392

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 94/311 (30%), Positives = 155/311 (49%), Gaps = 10/311 (3%)

Query: 48  ERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI----KLEVEYKQ 103
               L+  +S +++ +          ++  E+D+        +N   +    K +    Q
Sbjct: 58  RLAQLEGVVSALEQRRVLERHITSAKDMEAEKDEDMRELMREENEVYVDLLGKQDQALLQ 117

Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
               LS + +       ++AGAGG E+  +A  L  MYT + E   ++ E       +  
Sbjct: 118 ELLTLSDDEEYPALIFGLNAGAGGQEAMLFAQELYEMYTGYFEHMGWEWEEFASEGTDIG 177

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G++ A+L++ G +A+ WL+ E GVHR+ R+   + + R HTS +SI V P     I++ I
Sbjct: 178 GLRHASLMVSGEDAFRWLRYEAGVHRVQRVPATEKSGRMHTSTASITVIP-RPADIQVHI 236

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +E D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+  A   LR++
Sbjct: 237 AEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMKRLRSR 296

Query: 284 LYELELQKREE-IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDG 341
           L + +L+  E       ++ +  +    +IR+Y       + D R       + +  L G
Sbjct: 297 LVQQQLESVEASKMATKKAQQGSLNRNEKIRTYNFV-QDRITDHRIQGGTLHNLNGFLKG 355

Query: 342 --DLDDFMKAT 350
              L   ++  
Sbjct: 356 GDQLSGLIEKL 366


>gi|323337560|gb|EGA78805.1| Mrf1p [Saccharomyces cerevisiae Vin13]
 gi|323348703|gb|EGA82945.1| Mrf1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 303

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 96/255 (37%), Positives = 136/255 (53%), Gaps = 11/255 (4%)

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA- 163
           + L         + LE+  G GG E+  +   LL MY  +A  RK+K   +  ++ E   
Sbjct: 33  KLLPPHPFADKPSLLELRPGVGGIEAMIFTQNLLDMYIGYANYRKWKYRIISKNENESGS 92

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI---- 219
           GI  A L I+   +Y  L+ E GVHR+ RI   ++  R HTS +++ V P + D      
Sbjct: 93  GIIDAILSIEEAGSYDRLRFEAGVHRVQRIPSTETKGRTHTSTAAVVVLPQIGDESAKSI 152

Query: 220 ---EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
              E      + R+D  RASG GGQHVNTTDSAVR+THIP+G+VV  Q ERSQHKNKA+A
Sbjct: 153 DAYERTFKPGEIRVDIMRASGKGGQHVNTTDSAVRLTHIPSGIVVSMQDERSQHKNKAKA 212

Query: 277 WNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           + +LRA+L E E  ++EE       S+ +      +IR+Y   P   + D R        
Sbjct: 213 FTILRARLAEKERLEKEEKERKARKSQVSSTNRSDKIRTYNF-PQNRITDHRCGFTLLDL 271

Query: 336 SDVLDGD-LDDFMKA 349
             VL G+ LD+ ++A
Sbjct: 272 PGVLSGERLDEVIEA 286


>gi|255641350|gb|ACU20952.1| unknown [Glycine max]
          Length = 230

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 75/221 (33%), Positives = 131/221 (59%), Gaps = 12/221 (5%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY R++E+  +K   +     E+ G K+  + IKG   Y  LK E GVHR+ R+   ++ 
Sbjct: 1   MYERYSERNSWKYSLVSSSAAEKGGYKTYVMEIKGNRVYSKLKYESGVHRVQRVPLTETQ 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS +++ + P   D +E+ I   D  + T R+ GAGGQ+VN  ++A+ + H PTG+
Sbjct: 61  GRVHTSTATVAIMP-EADEVEVVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGI 119

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316
            + C +ER+Q KN+ +A+ +LRAKLYE+++++++E  ++    K ++G G    +IR+Y 
Sbjct: 120 RIFCTEERTQLKNRNRAFQLLRAKLYEIKVREQQE--SLRNQRKLQVGTGARSEKIRTYN 177

Query: 317 LQPYQMVKDLR--TNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +    V D R   N E T     LDGD++D +++ + +++
Sbjct: 178 YKD-NRVTDHRLKINYELT---SFLDGDIEDAVQSCVTMEQ 214


>gi|114651377|ref|XP_001150094.1| PREDICTED: mitochondrial translational release factor 1 isoform 2
           [Pan troglodytes]
          Length = 487

 Score =  139 bits (351), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 101/393 (25%), Positives = 158/393 (40%), Gaps = 63/393 (16%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +N  +    L    +   +  N    + L R    L    +  +EIQ+       L  + 
Sbjct: 80  ENLSKEYQTLEQCLQHIPV--NEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMC 137

Query: 77  LEEDDCSILQETSD------------------------------NLQRIKLEVEYKQFES 106
                 ++                                      ++ + +++    E 
Sbjct: 138 KSRQSLALWPRLECSNVITAHFNLELLDSSSPPTSASQVAGTTGLNKQDEKQLQELALEE 197

Query: 107 L-------------------LSGEADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWA 145
                                  + D ND  LEV AG   GG   Q +   +  MY  ++
Sbjct: 198 RQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYS 257

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH-- 203
             + ++ E L     +  G+  A   I G   Y  LK E G+HR+ RI     +SR    
Sbjct: 258 CYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGIHRVQRIPEVGLSSRMQRI 317

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
            + +   +     D +++++   D RIDT+RA GAGGQHVN TDSAVR+ HIPTG+VV+C
Sbjct: 318 HTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVEC 377

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW---GRQIRSYVLQPY 320
           QQERSQ KNK  A+ +LRA+LY+  ++K  +      + K ++G      +IR+Y     
Sbjct: 378 QQERSQIKNKEIAFRVLRARLYQQIIEK--DKRQQQSARKLQVGTRAQSERIRTYNF-TQ 434

Query: 321 QMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351
             V D R   E     + L G   LD  ++  L
Sbjct: 435 DRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLL 467


>gi|255017364|ref|ZP_05289490.1| peptide chain release factor 2 [Listeria monocytogenes FSL F2-515]
          Length = 231

 Score =  139 bits (351), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 113/231 (48%), Positives = 150/231 (64%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              R++ L  +  DP+ W +   A+ ++ E             +++      I LEL  E
Sbjct: 1   MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E D  + +E   +++     +   + + +LS   D N+A LE+H GAGGTESQDW +MLL
Sbjct: 61  EADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLL 120

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMY RW+EK+ FK E L+   G+EAGIKS TLLIKG NAYG+LK E+GVHRLVRISP+DS
Sbjct: 121 RMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDS 180

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           + RRHTSF S+ V P +DD IEIE+   D +IDTYRA+GAGGQH+NTTDSA
Sbjct: 181 SGRRHTSFVSVDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSA 231


>gi|119629057|gb|EAX08652.1| mitochondrial translational release factor 1, isoform CRA_c [Homo
           sapiens]
          Length = 487

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 101/393 (25%), Positives = 158/393 (40%), Gaps = 63/393 (16%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +N  +    L    +   +  N    + L R    L    +  +EIQ+       L  + 
Sbjct: 80  ENLSKEYQTLEQCLQHIPV--NEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMC 137

Query: 77  LEEDDCSILQETSD------------------------------NLQRIKLEVEYKQFES 106
                 ++                                      ++ + +++    E 
Sbjct: 138 KSRQSLALWPRLECSSVIIAHFNLELLDSSNPPTSASQVAGTTGLNKQDEKQLQELALEE 197

Query: 107 L-------------------LSGEADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWA 145
                                  + D ND  LEV AG   GG   Q +   +  MY  ++
Sbjct: 198 RQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYS 257

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH-- 203
             + ++ E L     +  G+  A   I G   Y  LK E G+HR+ RI     +SR    
Sbjct: 258 CYKHWQFELLNYTPADYGGLHHAAARISGDGVYKHLKYEGGIHRVQRIPEVGLSSRMQRI 317

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
            + +   +     D +++++   D RIDT+RA GAGGQHVN TDSAVR+ HIPTG+VV+C
Sbjct: 318 HTGTMSVIVLPQPDEVDVKLDPKDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVEC 377

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW---GRQIRSYVLQPY 320
           QQERSQ KNK  A+ +LRA+LY+  ++K  +      + K ++G      +IR+Y     
Sbjct: 378 QQERSQIKNKEIAFRVLRARLYQQIIEK--DKRQQQSARKLQVGTRAQSERIRTYNF-TQ 434

Query: 321 QMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351
             V D R   E     + L G   LD  ++  L
Sbjct: 435 DRVSDHRIAYEVRDIKEFLCGGKGLDQLIQRLL 467


>gi|331242267|ref|XP_003333780.1| peptide chain release factor 1 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309312770|gb|EFP89361.1| peptide chain release factor 1 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 416

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 92/318 (28%), Positives = 162/318 (50%), Gaps = 23/318 (7%)

Query: 44  MLMRERQHLDNA---ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE 100
            ++++++ +      +    E+    C+   + E   +ED   I       ++   L   
Sbjct: 69  EIIKKQKAIQPLKLAVEKYDELSSLACELKTISEKDPDEDMREIAITELKTIEERALRTI 128

Query: 101 YKQFE-----SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
            +  +     +    E+    A +E+  G GG E+  +A +L+ +YTR A ++++  + +
Sbjct: 129 EQVKQGLIQVASPRPESYDQSALVEIKPGVGGVEASHFATLLMNLYTRLATRKRWHIKPV 188

Query: 156 EIHDGEEA----GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
            +          G++ A L I+G   YG L+ E GVHR+ R+    + +  HTS +S+ V
Sbjct: 189 SVEYMTSGQGQDGLREAVLEIEGQAVYGSLRWEAGVHRVQRVPVMQNTASIHTSTASVIV 248

Query: 212 YPVVD-----DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
            P+       +  E    E D +++T R+ GAGGQHVN T+SAVR+THIPTG VV  Q  
Sbjct: 249 LPLNPSGSEENESEDLFDEKDIKLETMRSQGAGGQHVNKTESAVRLTHIPTGTVVSMQDS 308

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMV 323
           RSQH+N+ +A+ +LRA+L +L+L  R+++    ES  +++       +IR+Y  Q    V
Sbjct: 309 RSQHQNRERAYMILRARLLDLKL--RQKVIENRESRLSQVKNTNRSEKIRTYNFQ-QGRV 365

Query: 324 KDLRTNIEKTSPSDVLDG 341
            D R  +     +D++DG
Sbjct: 366 TDHRIGLTLPRLNDIIDG 383


>gi|194860855|ref|XP_001969666.1| GG23822 [Drosophila erecta]
 gi|190661533|gb|EDV58725.1| GG23822 [Drosophila erecta]
          Length = 392

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 94/311 (30%), Positives = 152/311 (48%), Gaps = 10/311 (3%)

Query: 48  ERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI----KLEVEYKQ 103
               L+  +S +++ +          ++  E+D+        +N   +    K +    Q
Sbjct: 58  RLAQLEGVVSALEQRRVLERQITSAKDMEAEKDEDMRELMREENEVYVDLLGKQDQALLQ 117

Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
               LS +         ++AGAGG E+  +A  L  MYT + E   ++ E       +  
Sbjct: 118 ELLTLSDDEMYPALIFGLNAGAGGQEAMLFAQELYEMYTGFFEHMGWEWEEFASEITDIG 177

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G++ A+L++ G +A+ WL+ E GVHR+ R+   + + R HTS +SI V P     I + I
Sbjct: 178 GLRHASLMVSGEDAFRWLRHEAGVHRVQRVPATEKSGRMHTSTASITVIP-RPADIHVHI 236

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +E D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+  A   LR++
Sbjct: 237 AEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMKRLRSR 296

Query: 284 LYELELQKREE-IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDG 341
           L + +L+  E       ++ +  +    +IR+Y       + D R       +    L G
Sbjct: 297 LVQQQLESAEASKMATKKAQQGSLNRNEKIRTYNFV-QDRITDHRIQGGTMHNLDGFLKG 355

Query: 342 --DLDDFMKAT 350
              L   ++  
Sbjct: 356 GDQLCGLIEKL 366


>gi|301347896|ref|ZP_07228637.1| peptide chain release factor 1 [Acinetobacter baumannii AB056]
 gi|301513180|ref|ZP_07238417.1| peptide chain release factor 1 [Acinetobacter baumannii AB058]
 gi|301597157|ref|ZP_07242165.1| peptide chain release factor 1 [Acinetobacter baumannii AB059]
          Length = 239

 Score =  139 bits (349), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 70/231 (30%), Positives = 107/231 (46%), Gaps = 1/231 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    + L RE   L        + +    D      +
Sbjct: 9   LDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLTEITEVWGKYRQAEEDIETAEMM 68

Query: 76  ALEEDDCSILQETSDNLQRI-KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + +E     + + +          +     DSN AYLE+ AG GG E+  ++
Sbjct: 69  KSDPDFKDMAEEEIQANKVLLEELESQLNILMIPKDPNDSNAAYLEIRAGTGGDEAAIFS 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+++AE + ++ E L  ++GE  G K     + G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSKYAESQGWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLKFESGAHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
             +S  R HTS  ++ + P +D    +EI+ +D RIDTYRASGAGGQH+N 
Sbjct: 189 ATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQHINK 239


>gi|194761148|ref|XP_001962794.1| GF14253 [Drosophila ananassae]
 gi|190616491|gb|EDV32015.1| GF14253 [Drosophila ananassae]
          Length = 392

 Score =  139 bits (349), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 90/311 (28%), Positives = 156/311 (50%), Gaps = 10/311 (3%)

Query: 48  ERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
               L+  ++ +++ +    +     ++ LE+D+        +N     L  + +Q    
Sbjct: 58  RLAQLEGVVTALEQRRVLERNITSAQDMELEKDEDMRSLMQEENAIYTDLLSKQEQTLLR 117

Query: 108 ----LSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
               ++ +         ++AGAGG E+  +A  L  MYT + E + +  E       +  
Sbjct: 118 ELLAMADDEVYPALIFGINAGAGGQEAMLFAQELYEMYTNYFEHKGWDYEEFAHETTDIG 177

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           GI+ A++++ G +A+ WL+ E GVHR+ R+   + + R HTS +SI V P     +++ I
Sbjct: 178 GIRHASIMVSGEDAFTWLRHEAGVHRVQRVPATEKSGRMHTSTASITVIP-RPADVQVHI 236

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           ++ D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+  A + LR++
Sbjct: 237 ADKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMSRLRSR 296

Query: 284 LYELELQKREEIANI-GESSKTEIGWGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDG 341
           L + +L+  E       ++ +  +    +IR+Y       + D R       +    L G
Sbjct: 297 LVQRQLESAEASTKATKKAQQGSLNRNEKIRTYNFV-QDRITDHRLQGGTMHNLDGFLKG 355

Query: 342 --DLDDFMKAT 350
              L   ++  
Sbjct: 356 GEQLTSLIEKL 366


>gi|195435374|ref|XP_002065668.1| GK14545 [Drosophila willistoni]
 gi|194161753|gb|EDW76654.1| GK14545 [Drosophila willistoni]
          Length = 397

 Score =  139 bits (349), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 97/317 (30%), Positives = 154/317 (48%), Gaps = 11/317 (3%)

Query: 48  ERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI----KLEVEYKQ 103
               L+  ++ +++ +    +     +L  E+D+        +N        K E    Q
Sbjct: 60  RLSQLEGVVNALEQRRVLERNLTSQKDLEQEKDEDMRQLMEEENQVYTDLLAKQEQTMLQ 119

Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
               L+ +         V++GAGG E+  +A  L  MYT + E   +  E       +  
Sbjct: 120 ELLTLADDEVYPSLLFGVNSGAGGQEAMLFAQELYEMYTSYFEHMDWDYEEFARETTDIG 179

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G++ A +LI   +AY WL+ E GVHR+ R+   + + R HTS +SI V P     +++  
Sbjct: 180 GLRHANILINDQDAYNWLRYEAGVHRVQRVPATEKSGRIHTSTASITVIP-KPADVQVHT 238

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +E D RI+T RASGAGGQHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+  A   L+A+
Sbjct: 239 AEKDLRIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNREVALKRLQAR 298

Query: 284 LYELELQKREE-IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDG 341
           L + +L+  E       ++ +  +    +IR+Y       + D R  N    + +  L G
Sbjct: 299 LVQQQLESSEATHLATKKAQQGSLNRNEKIRTYNFV-QDRITDHRIQNGTLHNLNGFLQG 357

Query: 342 --DLDDFMKAT-LAIKK 355
              L   ++   L  +K
Sbjct: 358 GEQLSGLIEKLQLEQRK 374


>gi|258566533|ref|XP_002584011.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237907712|gb|EEP82113.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 412

 Score =  139 bits (349), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 92/326 (28%), Positives = 144/326 (44%), Gaps = 28/326 (8%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK-----L 97
               +    L  A+  +KE          L  L  +      L+E               
Sbjct: 44  TETAKRVGELTLAVQALKEWDKAQETIAELNVLREDSSTDHELRELVSEDLETAVSSLPT 103

Query: 98  EVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
                +   +           +E+  GAGG E+  +A+ LLRMY     +R F+T  L+ 
Sbjct: 104 LSNKLKESLVPRHPFAEFPCLVEIRPGAGGAEASLFASELLRMYLAVCSRRGFRTTILKK 163

Query: 158 HDGEEAGI-------KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
              +  G          A + I+ P +Y   + E GVHR+ RI   ++  R HTS  S+ 
Sbjct: 164 DTEDGYGSGGSEDLLSEAVVEIETPRSYDIFRTEAGVHRVQRIPATEAKGRVHTSAVSVM 223

Query: 211 VYP-----------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
           + P             D + +  I+  + + +  RASGAGGQHVN T+SAVR+THIPTG 
Sbjct: 224 ILPSFPEQNDGALNFDDPNSDYYINPQEVQSEKMRASGAGGQHVNKTESAVRLTHIPTGT 283

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRSY 315
           VV  Q  RSQH+N+ +AW +LR+K+ ++  + RE+              ++G G ++R+Y
Sbjct: 284 VVAVQDTRSQHENRRKAWRLLRSKIAQMRREAREQQLVELRRGIMGGVAKMGRGDKVRTY 343

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDG 341
                    D R+ +   + SDVL+G
Sbjct: 344 NFG-QNRCTDHRSGMTIHNLSDVLEG 368


>gi|212545056|ref|XP_002152682.1| mitochondrial translation release factor (RF-1), putative
           [Penicillium marneffei ATCC 18224]
 gi|210065651|gb|EEA19745.1| mitochondrial translation release factor (RF-1), putative
           [Penicillium marneffei ATCC 18224]
          Length = 421

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 92/338 (27%), Positives = 149/338 (44%), Gaps = 28/338 (8%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN---LQRIKLEV 99
             + +    L      +K+          L  L  + +  S L+  +       + +L +
Sbjct: 67  TKVAKRLGELAPVAQAVKDWDKTHETITELNSLISDPETDSELRSLALEDLDQTQTQLPI 126

Query: 100 EYKQFESLLSGEADSN--DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
              + +S L            LE+  GAGG E+  +A  LLRMY  +  ++  +T  ++ 
Sbjct: 127 VSDKLKSALIPRHPFAALPCLLEIRPGAGGDEAGLFAYELLRMYQNFCSRKGLRTSIVKQ 186

Query: 158 HDGEEAGIKS---ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
              E         A + I+ P +Y  L+ E GVHR+ R+   ++  R HTS  S+ + P 
Sbjct: 187 DMEEAISNDRLSEAVVEIETPGSYDILRTEIGVHRVQRVPATEAKGRTHTSAVSVMILPN 246

Query: 215 VD-------------DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
                           + +  ++  + + +  RASGAGGQHVN T+SA+R+THIPTG+ V
Sbjct: 247 FPESGANEENLNFEDPNSDYYVNPQEVKSEKMRASGAGGQHVNKTESAIRLTHIPTGLTV 306

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKRE----EIANIGESSKTEIGWGRQIRSYVL 317
             Q  RSQH N+ +AW +LRAKL E   + RE    ++         ++G G ++R+Y  
Sbjct: 307 SMQDSRSQHANRKKAWQLLRAKLAERRREAREEEMVKLRRGAMGGVAKMGRGDKVRTYNF 366

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
                  D R+ I       VLDG   L+  M +    
Sbjct: 367 S-QSRCTDHRSGITVHDLDSVLDGGHGLETVMDSVRTW 403


>gi|149050029|gb|EDM02353.1| rCG37077, isoform CRA_a [Rattus norvegicus]
          Length = 436

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 83/351 (23%), Positives = 141/351 (40%), Gaps = 31/351 (8%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +        L+   +D  + ++  + +   R    L   ++  +EIQ+       L  + 
Sbjct: 81  EGLNDEYQSLDQCLQD--ISEDEGDRRASHRRHAELAPLVAVYQEIQEAEQAIEELESMC 138

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG---------AGG 127
              +     Q      +  ++  +          E        +              GG
Sbjct: 139 KSLNKQDEKQLQELVSEERQIIDQKIHRLYSELLEHLVPKEKCDRSNVILEVTSGRTTGG 198

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + ++ E L     +  G+  A   I G + Y  LK E G+
Sbjct: 199 DICQQFTREIFDMYQNYSYYKHWRFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 258

Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           HR+ RI     +SR     + +   +     D +++++   D R+DT+RA GAGGQHVNT
Sbjct: 259 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKVDPRDLRVDTFRARGAGGQHVNT 318

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TD  V          V+CQQERSQ KNK  A  +LRA+LY+  ++K  +      + K +
Sbjct: 319 TDRLV----------VECQQERSQLKNKEIALRVLRARLYQQIIEK--DKCQQQNARKLQ 366

Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351
           +G      +IR+Y       V D R   E     + L G+  LD  ++  L
Sbjct: 367 VGTRAQSERIRTYNF-TQDRVTDHRIAYEVRDIKEFLRGEKCLDQLIERLL 416


>gi|320592214|gb|EFX04653.1| mitochondrial translation release factor [Grosmannia clavigera
           kw1407]
          Length = 437

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 94/344 (27%), Positives = 159/344 (46%), Gaps = 31/344 (9%)

Query: 42  AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101
           A     E Q +  A++  +E Q    +   +     E+++   L +        +L+   
Sbjct: 66  AAKRAGEIQGVAQALAEWEEAQRTAEELRTMASAQEEDEELRKLAKDELEATEARLDGVA 125

Query: 102 KQFESLLSGEADS--NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD 159
           +Q  + L+ +         LE   G GG E + + + L  MY  +  ++ ++   ++   
Sbjct: 126 QQLTTTLTPKHPFGEMPCLLEFRPGPGGLEGRFFTDSLFHMYQSYCTRQGYRARVIKYEV 185

Query: 160 GEEAGI---------KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
            +  G          + A L ++   AY   +GE G+HR+ RI   + N R HTS +++W
Sbjct: 186 SDSLGETGADGESALQEAVLEVQEAGAYDVFRGEAGIHRVQRIPATEKNGRTHTSAAAVW 245

Query: 211 VYP--------------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
           V P                D   +  +  +D R++T RA GAGGQHVN T+SA+R+TH+P
Sbjct: 246 VLPSFPDSSGEGDSANDYDDPESDFYVQPADVRVETMRARGAGGQHVNKTESAIRLTHVP 305

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES---SKTEIGWGRQIR 313
           +G VV  Q  RSQH+N+  AW +LRA++ +   ++REE A        SK ++    +IR
Sbjct: 306 SGTVVSMQDSRSQHQNRDSAWKILRARIAQRRREQREEEARRLRDAVLSKAQVTRSDKIR 365

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATLAIKK 355
           +Y       V D R  ++  +  DVL G   L   + A  A ++
Sbjct: 366 TYNYS-QDRVTDHRCGLDVHNLPDVLAGGDTLARIVSAVCAWQR 408


>gi|167517235|ref|XP_001742958.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778057|gb|EDQ91672.1| predicted protein [Monosiga brevicollis MX1]
          Length = 416

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 105/362 (29%), Positives = 172/362 (47%), Gaps = 41/362 (11%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             +RL+ L T+   P+      E   + R    +      I      L     L ++   
Sbjct: 33  LSERLTQLTTENGAPN------EIASISRRLAKVAALTEVIHARDKALEAIAELQDMLKT 86

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFES----LLSGEADSNDAYLEVHAGAGGTESQDWA 134
           E+D  + +  + +L + + +++  + E     +    AD   A +E+ AG GG E+  +A
Sbjct: 87  EEDSELRELAASDLAQEQTQLQELEQELLQALVPEDTADEASAVVELRAGTGGREAALFA 146

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           + L  MY   A+++++  + L+    ++ G++ A+L I G   +G LK E GVHR+ RI 
Sbjct: 147 HDLKLMYQGLAQQQRWSFKVLDEQATDDGGLREASLSISGSGVFGMLKFESGVHRVQRIP 206

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             ++  R HTS +++ V P     +E+E+ + D  ++TYRA GAGGQHVNTTDSAVR+TH
Sbjct: 207 TTETAGRIHTSTATVAVLP-EPTDVEVEVLDKDIHVETYRAGGAGGQHVNTTDSAVRLTH 265

Query: 255 IPTGVVVQCQQERSQH-------------------------KNKAQAWNMLRAKLYELEL 289
           +PTG VV CQ ERSQH                         +NKA A  +L+A+++    
Sbjct: 266 LPTGTVVACQTERSQHKLEHIVSTRVAIDQCVLFNRVHHLVQNKAAAMKVLKARIFAQVR 325

Query: 290 QKREEIANIGESSKTEI---GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDD 345
            K+EE        +          +IR+Y + P   V D R      +   +L G  L +
Sbjct: 326 AKQEEERRAARREQISTTPGERSDRIRTYNM-PQDRVTDHRIKASLNNVETLLKGISLPE 384

Query: 346 FM 347
            +
Sbjct: 385 LI 386


>gi|84996385|ref|XP_952914.1| peptide chain release factor [Theileria annulata strain Ankara]
 gi|65303911|emb|CAI76290.1| peptide chain release factor, putative [Theileria annulata]
          Length = 364

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 91/286 (31%), Positives = 140/286 (48%), Gaps = 39/286 (13%)

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK-----------FKTE 153
           E     + D N   L + +G GG+ES DW  +L  MY ++    +            + +
Sbjct: 75  ELDPLRKYDRNSCKLIIKSGVGGSESFDWCRILTEMYKKFISHYEPPDSDDNFPSSLRLK 134

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            +++  G   G +     + G  AY  LKGE G HRL+R SP++S ++R TSF S+ V P
Sbjct: 135 EVDVCPGSTGGFRRVEFDVIGDYAYRLLKGENGTHRLIRNSPFNSENKRQTSFGSVQVVP 194

Query: 214 VVDDSI--------EIEISESDCRIDTYRASGAGGQHVNTTDSA---------------- 249
           ++ D+           ++ + D  I++ R+SG GGQ+VN  ++A                
Sbjct: 195 ILSDTDEEVVNFKKNRQLLKKDLIIESMRSSGKGGQNVNKVETAGNLLFLKSIFTKSTID 254

Query: 250 ----VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
               VR+ H PTG+ V+ QQER+  +N+  A  ML   + +  L+K  E  N  +     
Sbjct: 255 IFVLVRVYHKPTGLSVKVQQERTNTQNREIAIRMLTKLVDQHYLKKLNEKVNEIKGEDLV 314

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
             WG  IR+Y L P Q VKD RTN E +  ++VL+GDL  F+   L
Sbjct: 315 GTWGSHIRTYTLNPEQRVKDHRTNFETSKATNVLNGDLLPFILTYL 360


>gi|224086914|ref|XP_002308002.1| predicted protein [Populus trichocarpa]
 gi|222853978|gb|EEE91525.1| predicted protein [Populus trichocarpa]
          Length = 374

 Score =  138 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 85/342 (24%), Positives = 166/342 (48%), Gaps = 8/342 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            ++   R         + +LW++  ++  ++ +      AI  +K+++ +  +  ++ +L
Sbjct: 35  LEHEEARRIKQEEMIHECNLWEDPAKSNEILIKLAGSAKAIDALKDLKYKAEEAKLISQL 94

Query: 76  ALEEDDCSI-LQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
              E       ++       ++  ++  +   LL G  D   A + + AG+ G   + W 
Sbjct: 95  VEMEAINYQLFKQAYTASLDVRKLLDQYEMSRLLKGPYDKQGACVVIRAGSKGLNHEIWK 154

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             LL MY +WAEK  +K   +E H     GI+SAT+  +   AYG+L GE+G+H   +I+
Sbjct: 155 EELLNMYVKWAEKLGYKGRLVEKHTSMHGGIESATIEFEFECAYGYLSGERGIHH--KIN 212

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             + +     + + + V P+   +      + +  I +   S    +   T +  V + H
Sbjct: 213 SQNGSVHHEVTTACVDVVPLFLGTGFDFQIDDEELIVSCSPSLLRDRKSRT-ELTVCLQH 271

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI--GWGRQI 312
           IPTG+ VQ   ERS   NK +A N L+AKL  +  +++  + ++    + +I   W ++ 
Sbjct: 272 IPTGISVQSSGERSHFANKVKAHNRLKAKLLVIAEEQK--VCDVSSIRRADIVDEWQKET 329

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           R YV QPY++V+D+RT IE    + +LDG+++  + A + I+
Sbjct: 330 RRYVSQPYKLVQDVRTGIELPDLNSILDGNINTLIGAHINIR 371


>gi|260792424|ref|XP_002591215.1| hypothetical protein BRAFLDRAFT_62179 [Branchiostoma floridae]
 gi|229276418|gb|EEN47226.1| hypothetical protein BRAFLDRAFT_62179 [Branchiostoma floridae]
          Length = 353

 Score =  138 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 95/315 (30%), Positives = 158/315 (50%), Gaps = 12/315 (3%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET------SDNLQRIK 96
           + L++  + L + +  +++++    + + + +L    +D                   +K
Sbjct: 15  RRLVQRWEELRHIVEKVQQVETTQKELVEVEKLLSGLEDGETEMRDLALQEKEAYENDMK 74

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
              +      + + EAD ND  LEV AG GG E+  + + +  MY ++A  + +  + L 
Sbjct: 75  HLEDEILTLLVPADEADENDIILEVVAGVGGQEAMLFTSDMFEMYCQYAAYKNWHMQVLT 134

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
           +      G++ AT  IKG NAY  LK E GVHR+ R+   +   R HTS  ++ V P   
Sbjct: 135 MDTSTLGGLRHATASIKGLNAYKLLKLEAGVHRVQRVPKTEKAGRVHTSTMTVAVLPQ-P 193

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT-GVVVQCQQERSQHKNKAQ 275
             I+    +S+ +I+T +ASGAGGQHVN T+SAVRI HIPT    V+CQQERSQ +N+A 
Sbjct: 194 KEIDNTWDKSEFKIETKKASGAGGQHVNKTESAVRIVHIPTGENAVECQQERSQLRNRAI 253

Query: 276 AWNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           A   ++A+LY+++L ++     +    +        +IR+Y       V D R  +   +
Sbjct: 254 AMTTIQARLYQMKLDQQRSQQQLARQQQMGTAARSEKIRTYNF-TQDRVTDHRAGVNMFN 312

Query: 335 PSDVLDG--DLDDFM 347
             D L G   LD+ +
Sbjct: 313 LQDFLLGGDRLDEMI 327


>gi|302672683|ref|XP_003026029.1| hypothetical protein SCHCODRAFT_27452 [Schizophyllum commune H4-8]
 gi|300099709|gb|EFI91126.1| hypothetical protein SCHCODRAFT_27452 [Schizophyllum commune H4-8]
          Length = 251

 Score =  138 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 80/239 (33%), Positives = 122/239 (51%), Gaps = 9/239 (3%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           LE+  G GG E   +   L RMYTR+A +  ++   +   + E  G++   + +      
Sbjct: 7   LELKPGVGGAEGALFCVDLERMYTRYAAEHGWQLTPVNRSETESGGLREVLMEV--RKGK 64

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP---VVDDSIEIEISESDCRIDTYRA 235
           G    E G HR+ RI   +S+ R HTS +S+ V P       +        D RI+  RA
Sbjct: 65  GRGDFESGAHRVQRIPATESSGRVHTSTASVLVLPLVEEGTPTTTPLFKMEDVRIEVMRA 124

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
            GAGGQHVN T+SAVR+THIPTG+VV  Q ERSQH N+ +A+ +L ++L    L +  E 
Sbjct: 125 RGAGGQHVNKTESAVRLTHIPTGIVVAMQDERSQHVNRRRAFTVLTSRLLAQRLVQEAED 184

Query: 296 ANIGESS-KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATLA 352
                +S  + +    +IR+Y   P   + D R  +   +   V++G  L+  ++A  A
Sbjct: 185 RRKRRNSLVSGVDRSDKIRTYNW-PQSRITDHRIGMSV-NLEPVMEGHGLETLIRALAA 241


>gi|148703821|gb|EDL35768.1| mitochondrial translational release factor 1, isoform CRA_c [Mus
           musculus]
          Length = 436

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 91/351 (25%), Positives = 148/351 (42%), Gaps = 31/351 (8%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           ++  +    L+   +   + +N  + + L R    L    +  +EIQ+       L  L 
Sbjct: 81  EDLNKEYQTLDQCLQ--GISENEGDRRALHRRHAQLAPLAAVYQEIQEAEQAIEELESLC 138

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFES-------LLSGEADSNDAYLEVHAG--AGG 127
              +     Q      +  ++  +             +   + D +D  LEV +G   GG
Sbjct: 139 KSLNKQDEKQLQELVSEERQIIDQKIHRLYSELLERLVPKEKYDWSDVILEVTSGRTTGG 198

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
              Q +   +  MY  ++  + +K E L     +  G+  A   I G + Y  LK E G+
Sbjct: 199 DICQQFTREIFDMYQNYSYYKHWKFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGI 258

Query: 188 HRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           HR+ RI     +SR     + +   +     D +++++   D R+DT+RA GAGGQHVNT
Sbjct: 259 HRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKVDPKDLRVDTFRARGAGGQHVNT 318

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TD  V          V+CQQERSQ KNK  A  +LRA+LY+  ++K           K +
Sbjct: 319 TDRLV----------VECQQERSQLKNKEIALRVLRARLYQQIIEKDRCQQQNA--RKLQ 366

Query: 306 IGW---GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKATL 351
           +G      +IR+Y       V D R   E     + L G+  LD  ++  L
Sbjct: 367 VGTRAQSERIRTYNF-TQDRVTDHRIAYEVRDIKEFLRGEKCLDQLIERLL 416


>gi|302759761|ref|XP_002963303.1| hypothetical protein SELMODRAFT_438470 [Selaginella moellendorffii]
 gi|300168571|gb|EFJ35174.1| hypothetical protein SELMODRAFT_438470 [Selaginella moellendorffii]
          Length = 391

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 88/342 (25%), Positives = 156/342 (45%), Gaps = 33/342 (9%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD---NLILLE 74
           +   R + L+    +P +     +   + +E ++LD ++  IK ++ +  +      L++
Sbjct: 57  SIEDRHACLSEALLEPGIAS--EKLIKMNKELRNLDYSVDMIKALRAKEKEVIGLKELVK 114

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
            ++E+++   L          ++          L  + ++  +     +        D  
Sbjct: 115 ESVEDEEMRRLASGELQTATREVRDAQHDVLLELIPKDEAARSRAGKCSLM--CLMFDMF 172

Query: 135 NMLLRM--YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           +++ R   Y ++A    ++ E L I   +  G K A+  I G   YG LK E GVHR+ R
Sbjct: 173 HLIFRSWRYDKYAANNSWRFEVLSITTTDTRGYKEASAAISGDGVYGALKFESGVHRVQR 232

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +   R HTS +S+ + P   + +++EI   + +IDTYRA GAGGQHVNTT SAVR+
Sbjct: 233 VPVTEKAGRIHTSTASVAILP-EANEVDVEIRNDEIKIDTYRAGGAGGQHVNTTCSAVRV 291

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WG 309
           TH PTG+VV  Q  R                    EL++    A+  E  + +IG     
Sbjct: 292 THAPTGIVVAIQDTRLY------------------ELERSRAAASRSELRQDQIGSSDRS 333

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG-DLDDFMKAT 350
            +IR+Y   P   V D R  + + +   +++G  L+ F+ A 
Sbjct: 334 ERIRTYNF-PQGRVTDHRVGVTQHAIEQIMEGIGLEIFVNAL 374


>gi|213622420|ref|ZP_03375203.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 240

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 142/233 (60%), Positives = 171/233 (73%)

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
           D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ AG+GG
Sbjct: 1   DVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGG 60

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
           TE+QDWA+MLLRMY RWAE R FKTE +E  +GE AGIKSAT+ I G  AYGWL+ E GV
Sbjct: 61  TEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLRTETGV 120

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           HRLVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHVN T+
Sbjct: 121 HRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTE 180

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+QK+       E
Sbjct: 181 SAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAME 233


>gi|242814526|ref|XP_002486386.1| mitochondrial translation release factor (RF-1), putative
           [Talaromyces stipitatus ATCC 10500]
 gi|218714725|gb|EED14148.1| mitochondrial translation release factor (RF-1), putative
           [Talaromyces stipitatus ATCC 10500]
          Length = 427

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 94/338 (27%), Positives = 150/338 (44%), Gaps = 28/338 (8%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ---ETSDNLQRIKLEV 99
             + +    L      +K+          L  L  + +  S L+          + +L +
Sbjct: 68  TKVAKRMGELAPVAQAVKDWDKTHETITELNSLINDPETDSELRSLAIEDLEQTQTQLPI 127

Query: 100 EYKQFESLLSGEADSN--DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
             ++ +S L            LE+  GAGG E+  +A  LLRMY  +  ++  +T  ++ 
Sbjct: 128 VSEKLKSALIPRHPFAALPCLLEIRPGAGGDEAGLFAYELLRMYQSFCSRKGLRTSIVKQ 187

Query: 158 HDGEEAGIKSAT---LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP- 213
              E       T   + I+ P +Y  L+ E GVHR+ R+   ++  R HTS  S+ + P 
Sbjct: 188 DMEESTSNDRVTEAVVEIETPGSYDILRTEIGVHRVQRVPATEAKGRTHTSAVSVMILPS 247

Query: 214 ------------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
                         D + +  ++  + R +  RASGAGGQHVN T+SA+R+THIPTG+ V
Sbjct: 248 FPESGANEDNLNFEDPNSDYYVNPQEVRSEKMRASGAGGQHVNKTESAIRLTHIPTGLTV 307

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKRE----EIANIGESSKTEIGWGRQIRSYVL 317
             Q  RSQH N+ +AW +LRAKL E   + RE    ++         ++G G ++R+Y  
Sbjct: 308 SMQDSRSQHANRKKAWQLLRAKLAERRREAREEEMVKLRRGAMGGVAKMGRGDKVRTYNF 367

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATLAI 353
                  D R+ I       VLDG   L+  M +    
Sbjct: 368 S-QSRCTDHRSGITVHDLDSVLDGGHGLETVMDSVRTW 404


>gi|256079594|ref|XP_002576071.1| peptide chain release factor [Schistosoma mansoni]
 gi|238661330|emb|CAZ32306.1| peptide chain release factor, putative [Schistosoma mansoni]
          Length = 1202

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 86/375 (22%), Positives = 157/375 (41%), Gaps = 57/375 (15%)

Query: 8   NCLGGLFD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER---------QHLDNAI 56
             L   FD    N +     +                    +E          ++L   +
Sbjct: 36  EDLREHFDAFKKNIISEYENVTKLMTSG------------AKECDLLPLSECWKNLRPIV 83

Query: 57  SFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD--- 113
             I+E+   L  +  + +L  +        + +D     +LE + +  +     +     
Sbjct: 84  DVIEELDILLEADKEVDQLVTDIVGTDTEDDVNDLKAIAELERKQRNVQREALEKKLLSL 143

Query: 114 ---------SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE-------- 156
                    ++   +E+ AGAGG E+  +A+ L+ MY  +A ++ +    L         
Sbjct: 144 LLPIDERDLNSAVIMELFAGAGGKEAGLFAHDLMNMYHAFAVQQNWSFTVLHKTVMSNEE 203

Query: 157 -----------IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
                          E  G  +    +    AYG LK E GVHR+ R+    S ++ HTS
Sbjct: 204 CAPSHNETSLSYVRVEIEGEPTTEAGVMSLGAYGQLKWEAGVHRVQRVPVTSSQNKIHTS 263

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
             ++ + P   + ++++I ++D + + +R +G GGQ+VN + SAVR+TH+PTG+V+ CQ+
Sbjct: 264 TVAVSIQP-KYEDVDVDIPDNDLKWEFHRPTGPGGQNVNKSTSAVRLTHLPTGIVISCQR 322

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQIRSYVLQPYQMVK 324
           ER QH NK  A +ML+ +L E+ L+ +  + +    S    +    +IR+Y   P   V 
Sbjct: 323 ERYQHVNKILALDMLKERLREIHLKSQSHLIDSIRRSHLGNLDRSEKIRTYNF-PQDRVT 381

Query: 325 DLRTNIEKTSPSDVL 339
           D R N    +    +
Sbjct: 382 DHRLNHSWNNLYRFM 396


>gi|47218558|emb|CAG10257.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 438

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 90/336 (26%), Positives = 142/336 (42%), Gaps = 32/336 (9%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           L+R    L    + +  ++    D   ++ L          +  +  L+  +  +  K  
Sbjct: 95  LLRRHAELLPVATALDSVRRASRDREEVVSLLQSSSGVDEDKLFTQQLEEEEGHISQKLL 154

Query: 105 ESL--------LSGEADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
                       +   DS++  LEV +G   GG   Q +   +  MY  +A  + +  E 
Sbjct: 155 SLRRDLVKALLPADPLDSSNVLLEVVSGRTTGGDICQQFTREVFDMYQGFASHKNWDFEP 214

Query: 155 LEIHDGE------------EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
           +   + E              G+  A   I G N Y  LK E G HR+ RI     +SR 
Sbjct: 215 VNYTNAEYGCDVRGCCLLLSGGLHHAAARITGENVYRHLKHEGGTHRVQRIPEVGLSSRM 274

Query: 203 H--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
               + +   +       +++ +   D RIDT+R+ GAGGQ VNTTDSAVR+ H+PTG+ 
Sbjct: 275 QRIHTGTMTVIILPQPAELDLHVDPKDLRIDTFRSRGAGGQSVNTTDSAVRVVHLPTGIA 334

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW---GRQIRSYVL 317
           V+CQQ RSQ +N+  A   LRA+LY+  L K  E      + + ++G      +IR+Y  
Sbjct: 335 VECQQSRSQLQNRDTAMRALRARLYQARLGK--ESQRRLSARRQQVGTRSQSERIRTYNF 392

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351
                V D RT        + + G   L D +   L
Sbjct: 393 S-QDRVTDHRTGYTARDIKEFMRGGQALQDLIGDVL 427


>gi|255637443|gb|ACU19049.1| unknown [Glycine max]
          Length = 155

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 65/140 (46%), Positives = 90/140 (64%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
            D+S+ +EI E D  I   RA G GGQ+VN  ++AVRITHIPTGV V+C +ERSQ  NK 
Sbjct: 5   PDESMNVEIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKI 64

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           +A + L+AKL  +  ++R            +  WG+QIR+YV  PY++VKD+RT  E T 
Sbjct: 65  RALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETTD 124

Query: 335 PSDVLDGDLDDFMKATLAIK 354
            + V+DG+LD F+K+ L  K
Sbjct: 125 ITSVMDGELDPFIKSYLKHK 144


>gi|315926256|ref|ZP_07922444.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus
           ATCC 23263]
 gi|315620443|gb|EFV00436.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus
           ATCC 23263]
          Length = 173

 Score =  136 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 92/170 (54%), Positives = 120/170 (70%), Gaps = 2/170 (1%)

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           G HRLVRISP+D+  RR TSF+ + V PVV+++  ++I  SD R+D + ASG GGQ VNT
Sbjct: 1   GTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVDIPGSDLRVDVFHASGPGGQGVNT 60

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVR+TH+PTG+VV CQ ERSQ +NKA A  +L+AKL E   +++E   N  +S    
Sbjct: 61  TDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSEGN- 119

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
             WG Q+RSYVL PYQMVKDLRTN E  +   V DGD+DDF+ A +  ++
Sbjct: 120 -SWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDDFIDAGIRWRR 168


>gi|255023944|ref|ZP_05295930.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-208]
          Length = 184

 Score =  135 bits (340), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 68/177 (38%), Positives = 103/177 (58%), Gaps = 7/177 (3%)

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           K   G HR+ R+   +S  R HTS +++ + P   + +EIE+ + D R DT+ ++GAGGQ
Sbjct: 1   KYXNGAHRVQRVPETESGGRIHTSTATVAILP-EAEEVEIELHDKDIRTDTFASTGAGGQ 59

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
            VNTT SAVR+THIPTG+VV  Q ERSQ KNK +A  +LRA++Y+    +RE       +
Sbjct: 60  SVNTTMSAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARVYDKF--EREAREEYDAN 117

Query: 302 SKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            K+ +G G    +IR+Y   P   V D R  +       +++G LD+ + A +   +
Sbjct: 118 RKSAVGTGDRSERIRTYNY-PQNRVTDHRIGLTIQKLDQIMEGKLDEIIDALILEDQ 173


>gi|170595371|ref|XP_001902354.1| Peptidyl-tRNA hydrolase domain containing protein [Brugia malayi]
 gi|158590015|gb|EDP28797.1| Peptidyl-tRNA hydrolase domain containing protein [Brugia malayi]
          Length = 382

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 97/355 (27%), Positives = 159/355 (44%), Gaps = 24/355 (6%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           +       F+      +L  L    +D     N            HL+   +   +  D+
Sbjct: 17  RTETARTYFEV--IFSKLKALQKDGKDESRINNSAL-------VTHLETVTTLAHKFYDK 67

Query: 66  LCDNLILLELALEEDDCSILQET--SDNLQRIKLEVEYKQFESLLSGEADS---NDAYLE 120
           L     L  L  E +D  I +           +L+    +   ++    +    N+  LE
Sbjct: 68  LEMLTQLDLLLKEGNDPEIQEIAKLDSEQLTEELDSVVNKLTDVVIPVTEYDLLNNCQLE 127

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +  G GG E+  +A+ L +MY  +A+  K+K    ++      GI+SA + ++G  A+  
Sbjct: 128 ITPGVGGVEASLFASELAQMYHNYAQFMKWKWTPYQMDVSPSGGIRSAVVFVRGNGAFRT 187

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E GVHR+ R    D   R HTS S + V P   D IE  ++ +D +++T RASG GG
Sbjct: 188 LRYEAGVHRVQRFPVTDKT-RMHTSTSVVAVLP-EPDKIEACVTPADVKVETMRASGPGG 245

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN   +AVR+TH  TGV V C  ER+Q+ N   A+  L A L + +L   E       
Sbjct: 246 QNVNQRSTAVRLTHRETGVTVHCTDERTQYSNMEIAYKRLAAILLQRKLD--ETQKQYSS 303

Query: 301 SSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKAT 350
           S K +IG      ++R+Y  +  Q V D R        ++V+ G+  L+  +++ 
Sbjct: 304 SRKLQIGTKARAEKVRTYNFKDDQ-VTDHRLGRAWQGVANVMKGNSVLNQIIQSL 357


>gi|194705206|gb|ACF86687.1| unknown [Zea mays]
 gi|195648693|gb|ACG43814.1| hypothetical protein [Zea mays]
          Length = 230

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 73/221 (33%), Positives = 128/221 (57%), Gaps = 12/221 (5%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY R+ E+  +K + +   + E  G K+  + +KG   Y  LK E GVHR+ R+   ++ 
Sbjct: 1   MYQRYCERNNWKFKPVSCSEAEMGGYKTYVMEVKGKQVYSKLKFESGVHRVQRVPLTEAM 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS +++ + P   D +++ I   D  + T R+ GAGGQ+VN  ++AV + H PTG+
Sbjct: 61  GRVHTSTATVAIMP-EADEVDVVIDPKDIELKTARSGGAGGQNVNKVETAVDLIHKPTGI 119

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYV 316
            + C +ERSQ +N+ +A+ +LRAKLYE++L++++E  ++    K ++G G    +IR+Y 
Sbjct: 120 RIFCTEERSQLQNRERAFQLLRAKLYEIKLREQQE--SLRNQRKLQVGTGARSEKIRTYN 177

Query: 317 LQPYQMVKDLR--TNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            +    V D R   N E T     L GD++  +++   +++
Sbjct: 178 YKD-NRVTDHRLKMNFELT---SFLLGDIESAIQSCATMEQ 214


>gi|329942484|ref|ZP_08291294.1| peptide chain release factor 2 [Chlamydophila psittaci Cal10]
 gi|328815394|gb|EGF85382.1| peptide chain release factor 2 [Chlamydophila psittaci Cal10]
          Length = 272

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 117/240 (48%), Positives = 160/240 (66%)

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
           + +    L       D  + ++        +  +   + + LLSGE D N  +L ++AGA
Sbjct: 1   MDNLAFFLNDGDVSADPELREDLEKEFAICENILSEWETQRLLSGEVDKNPCFLTINAGA 60

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GGTES DW  ML RMY RWA + ++K E ++  +G+ AGIK  T+   G  AYG+ K E+
Sbjct: 61  GGTESCDWVEMLFRMYCRWAAQHQWKVEVIDRQEGDVAGIKHVTVKFSGDYAYGYAKAER 120

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHRLVRISP+DSN++RHTSF+S+ VYP +DD IEI+I  +D RIDT+R+SGAGGQHVN 
Sbjct: 121 GVHRLVRISPFDSNAKRHTSFASVDVYPEIDDEIEIDIRPNDLRIDTFRSSGAGGQHVNV 180

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           TDSAVRITHIPTG++V CQ+ERSQ +N+     MLRA++Y+  LQ+R E   I   +K +
Sbjct: 181 TDSAVRITHIPTGIMVSCQRERSQIQNRESCMKMLRARMYQQILQERLEKQLIDRKNKKK 240


>gi|330951103|gb|EGH51363.1| peptide chain release factor 1 [Pseudomonas syringae Cit 7]
          Length = 243

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 71/235 (30%), Positives = 110/235 (46%), Gaps = 3/235 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  ++   ++     D      L
Sbjct: 9   LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVALYAQLLRVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +  +  +         Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LKDSDPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           ++  L RMY+R+AE+R ++ E L  ++GE  G K     ++G + YG LK E G HR+ R
Sbjct: 129 FSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQR 188

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
           +   +S  R HTS  ++ V P  D+   IEI+ +D R+DTYR+SGAGGQHVN TD
Sbjct: 189 VPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTYRSSGAGGQHVNKTD 243


>gi|301347115|ref|ZP_07227856.1| peptide chain release factor 2 [Acinetobacter baumannii AB056]
 gi|301512357|ref|ZP_07237594.1| peptide chain release factor 2 [Acinetobacter baumannii AB058]
 gi|301597511|ref|ZP_07242519.1| peptide chain release factor 2 [Acinetobacter baumannii AB059]
          Length = 113

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 69/112 (61%), Positives = 84/112 (75%), Gaps = 1/112 (0%)

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N TDSAVR+THIPTG+VV CQ +RSQH N+  AW  LRAKLYELE+QKR E A   E 
Sbjct: 1   HINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQLRAKLYELEMQKRNEAAQALED 60

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           SK++IGWG QIRSYVL     +KDLRT +E ++   VLDGDLD F++A+L  
Sbjct: 61  SKSDIGWGSQIRSYVLDD-SRIKDLRTGVENSNTGAVLDGDLDRFIEASLKQ 111


>gi|67526009|ref|XP_661066.1| hypothetical protein AN3462.2 [Aspergillus nidulans FGSC A4]
 gi|40743816|gb|EAA63002.1| hypothetical protein AN3462.2 [Aspergillus nidulans FGSC A4]
          Length = 367

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 91/351 (25%), Positives = 148/351 (42%), Gaps = 38/351 (10%)

Query: 18  NAVQRLSFLNTKTE---DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           N     + L+ +     DP           + R    L        E  +       L  
Sbjct: 19  NLAAEHANLSNQLTTSFDP----------KIARRAGELGPVAKAWAEWSNANESMSELHS 68

Query: 75  LALEEDDCSILQETSDNLQRIKL-----EVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           +  + D  + L+  +    +          +  +   +           LE+  GAGG E
Sbjct: 69  MLEDPDTEAELRSIAVEELQTTEAKLTAISDNLKRALVPRHPFADLSCLLEIRPGAGGDE 128

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGE--EAGIKSATLLIKGPNAYGWLKGEQGV 187
           +  +A  LL+MY  +   +  ++  +++  G+     +  A L ++   AY  L+ E GV
Sbjct: 129 ASIFAFELLQMYVAFCAHQGLRSTLMKLERGDNRADALTEAVLEVEAEGAYDLLRTESGV 188

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYP-------------VVDDSIEIEISESDCRIDTYR 234
           HR+ R+   ++  R HTS  S+ V P               D + +  I   + R +  R
Sbjct: 189 HRVQRVPTTEAKGRTHTSAVSVMVLPSFPDTGGGDGAFNFDDPNSDYYIDPQEVRTEKMR 248

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASGAGGQHVN T+SA+R+TH+PTG+VV  Q  RSQH N+ +AW +LRAKL E   + RE+
Sbjct: 249 ASGAGGQHVNKTESAIRLTHMPTGIVVSMQDSRSQHANRKKAWQILRAKLAEARQEAREQ 308

Query: 295 I----ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
                          +G G ++R+Y         D R+     +  +VL+G
Sbjct: 309 ELVELRRGAMGGIGRMGRGDKVRTYNYG-QSRCTDHRSGFTVHNLDNVLEG 358


>gi|328853865|gb|EGG03001.1| hypothetical protein MELLADRAFT_109720 [Melampsora larici-populina
           98AG31]
          Length = 413

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 91/337 (27%), Positives = 158/337 (46%), Gaps = 18/337 (5%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +R    N        W N    K   +    + + +   + + + + +  ++     + D
Sbjct: 50  KRFIKTNETIPSQGSWSNGEFLKK-SKRVDSIKSTLEEWERVMNLVSELQLISNTDPDPD 108

Query: 81  DCSI--------LQETSDNLQRIKLEVEYKQFESLLSGEADSNDA-YLEVHAGAGGTESQ 131
              I           +          ++ +  ESL         +  +E+  G GG E+ 
Sbjct: 109 MRQIALTELESLYSSSDQESSNNLSNIKSRLLESLFPTPISHRQSALVEIKPGVGGVEAA 168

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEA----GIKSATLLIKGPNAYGWLKGEQGV 187
            +A  L+ +Y R A ++K+K + + +          G++ ATL I+G + Y  ++ E GV
Sbjct: 169 HFATSLMNLYNRHALRQKWKVKPVNVEFMVSGHSMDGLREATLEIEGEDVYKRMRWEAGV 228

Query: 188 HRLVRISPYDSNSRRHTSFSSIW--VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           HR+ R+    + S  HTS +++        D   E    E D R++T R+ GAGGQHVN 
Sbjct: 229 HRVQRVPVMQNTSSVHTSTAAVLPLDPGNQDSQEEALFEEKDVRMETMRSQGAGGQHVNK 288

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVR+TH+PTG+VV  Q  RSQH+N+A+A+ +LRA+L +L  Q+++        S+ +
Sbjct: 289 TESAVRLTHVPTGIVVSMQDSRSQHQNRARAFMILRARLSDLRNQQKQVEERGLRLSQVK 348

Query: 306 IG-WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
                ++IR+Y  Q    V D R  +      DV++G
Sbjct: 349 TSDRNQKIRTYNFQ-QGRVTDHRIGLTLPRLHDVMEG 384


>gi|198421557|ref|XP_002128173.1| PREDICTED: similar to mitochondrial translational release factor
           1-like [Ciona intestinalis]
          Length = 432

 Score =  132 bits (332), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 67/293 (22%), Positives = 126/293 (43%), Gaps = 8/293 (2%)

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSD---NLQRIKLEVEYKQFESLLSGE 111
            +  + E    L +   L +    +++     E        +  +++    +        
Sbjct: 109 VVETLNERLHDLGEIEKLSKEFKSDEEMFKETEIERRSLEDEISEIKTSIVESLVTDKDS 168

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK--SAT 169
            D++ A LEV  G GG E+  +A  +  MY ++  +  +  + +E   GE   +   +A 
Sbjct: 169 EDNDGAVLEVTPGIGGVEAAMFATEIFDMYQKFCHRSGYDLDVVEYDMGENGALVKANAV 228

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           +      AY   K E G+HR+ R+   + + R HTS  S+ V P   + I   +   D +
Sbjct: 229 VSSGDGYAYSLFKHEAGIHRVQRVPKTEKSGRLHTSTVSVAVLP-KSNEILPPLQRKDLK 287

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           I   ++SG GGQH N+T S   + HIPTG +V+ ++ R Q  N  +A   L   ++   +
Sbjct: 288 ITFSKSSGHGGQHANSTLSCAVVCHIPTGNIVRVEETRCQKTNLDRAQQKLTHIVHSEAM 347

Query: 290 QKREEIANIGESSKTEI-GWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           + ++   N     +T       +IR+Y    +  + D R  +  +   + L+G
Sbjct: 348 KAKQAQVNSVRRKQTRSRERSDKIRTYNFH-HSRITDHRIGVTLSGIEEFLNG 399


>gi|30692917|ref|NP_198466.2| HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109); translation release
           factor/ translation release factor, codon specific
           [Arabidopsis thaliana]
 gi|332006669|gb|AED94052.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana]
          Length = 391

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 102/269 (37%), Positives = 158/269 (58%), Gaps = 4/269 (1%)

Query: 1   MKL-SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
           +++ S ++  +    +     Q ++ L +K  D   W +  +A+  +     L + +  +
Sbjct: 88  VEIASARVEEIRASANLQQLEQEITNLESKATDTSFWDDRTKAQETLSSLNDLKDRMRLL 147

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK--LEVEYKQFESLLSGEADSNDA 117
            E +  + D   +++L  E D   +           +    ++  +   LLSG  D   A
Sbjct: 148 SEFKTMVEDAETIVKLTEEMDSTDVSLLEEAMGIIKELNKSLDKFELTQLLSGPYDKEGA 207

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            + + AGAGGT++QDWA+MLLRMY RW EK+++KT+ +E+ +GEEAGIKSATL I+G  A
Sbjct: 208 VVYITAGAGGTDAQDWADMLLRMYMRWGEKQRYKTKVVEMSNGEEAGIKSATLEIEGRYA 267

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRAS 236
           YG++ GE+G HR+VR SP++S   R TSFS + V P + ++++ IEI E D  I   RA 
Sbjct: 268 YGYISGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAG 327

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           G GGQ+VN  ++AVRITHIPTGV V+C  
Sbjct: 328 GKGGQNVNKVETAVRITHIPTGVAVRCTD 356


>gi|323452428|gb|EGB08302.1| hypothetical protein AURANDRAFT_13671 [Aureococcus anophagefferens]
          Length = 235

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 96/232 (41%), Positives = 137/232 (59%), Gaps = 7/232 (3%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           + E+ ++G  D  D  LE+ AGAGG ++Q+W  M+ RMY R+ EKR F     E  +G+ 
Sbjct: 1   ELEAAMTGPYDGCDCRLEITAGAGGLDAQEWTAMVARMYARFGEKRGFSVVEAERSEGDH 60

Query: 163 AGIKSAT-LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
            G      L I+G NA+G  +GE+G HRLVR SP++S ++R TSF+S+   P + D    
Sbjct: 61  PGCVKGVSLEIRGANAFGLFRGEKGAHRLVRQSPFNSAAKRQTSFASVEPTPDLPDDHPD 120

Query: 222 EI------SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
                     +D  + T RA GAGGQ+VN  ++AVR+TH+PTG+ V+C +ER+Q  NKA 
Sbjct: 121 LPADVAELDPADLEVTTARAGGAGGQNVNKVETAVRVTHVPTGLRVRCARERTQGANKAI 180

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           A  MLRAKL     ++R          +    +G  +RSYVL PY++VKD R
Sbjct: 181 ALTMLRAKLVAAMAEQRAATLADIRGDRVAADFGASVRSYVLHPYKLVKDDR 232


>gi|328788515|ref|XP_001119866.2| PREDICTED: peptide chain release factor 1-like, mitochondrial-like
           [Apis mellifera]
          Length = 354

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 96/292 (32%), Positives = 142/292 (48%), Gaps = 11/292 (3%)

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES---LLSGEA 112
           I            N    +     ++   L +  +     +L    +Q  +         
Sbjct: 34  IKKYLNYLMNAYQNEDERKGINGNEELKNLAKEEELTYMQQLLEIDEQILNIIIKYIDVE 93

Query: 113 DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
             ++  +E+  G GG E+  +A  LL MY ++     F  E LEI   E  G++ AT+LI
Sbjct: 94  HYDNIIMEIVPGVGGQEAMLFAKDLLNMYIKYFNHIGFNYEILEILSNELNGLRKATVLI 153

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
              NA+  LK E GVHR+ RI   + + R HTS + + + P     ++I++ + D  I++
Sbjct: 154 SDNNAFKKLKYEGGVHRVQRIPATEKSGRLHTSTAVVTILP-EPKDVDIKLEDKDLIIES 212

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            +ASGAGGQHVNTTDSA+RITHIPTG +V CQ  RSQ KNK  A   L++ LYE EL K+
Sbjct: 213 KKASGAGGQHVNTTDSAIRITHIPTGTIVTCQTNRSQIKNKQIALTKLKSLLYEEELNKQ 272

Query: 293 EEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLD 340
               N     K +IG      +IR+Y       V D R  N    +  + ++
Sbjct: 273 VSFINQI--RKKQIGKRLRNEKIRTYNFN-QDRVTDHRIPNGTMYNLKEFME 321


>gi|259485545|tpe|CBF82657.1| TPA: mitochondrial translation release factor (RF-1), putative
           (AFU_orthologue; AFUA_3G05410) [Aspergillus nidulans
           FGSC A4]
          Length = 418

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 91/351 (25%), Positives = 148/351 (42%), Gaps = 38/351 (10%)

Query: 18  NAVQRLSFLNTKTE---DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           N     + L+ +     DP           + R    L        E  +       L  
Sbjct: 47  NLAAEHANLSNQLTTSFDP----------KIARRAGELGPVAKAWAEWSNANESMSELHS 96

Query: 75  LALEEDDCSILQETSDNLQRIKL-----EVEYKQFESLLSGEADSNDAYLEVHAGAGGTE 129
           +  + D  + L+  +    +          +  +   +           LE+  GAGG E
Sbjct: 97  MLEDPDTEAELRSIAVEELQTTEAKLTAISDNLKRALVPRHPFADLSCLLEIRPGAGGDE 156

Query: 130 SQDWANMLLRMYTRWAEKRKFKTEALEIHDGE--EAGIKSATLLIKGPNAYGWLKGEQGV 187
           +  +A  LL+MY  +   +  ++  +++  G+     +  A L ++   AY  L+ E GV
Sbjct: 157 ASIFAFELLQMYVAFCAHQGLRSTLMKLERGDNRADALTEAVLEVEAEGAYDLLRTESGV 216

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYP-------------VVDDSIEIEISESDCRIDTYR 234
           HR+ R+   ++  R HTS  S+ V P               D + +  I   + R +  R
Sbjct: 217 HRVQRVPTTEAKGRTHTSAVSVMVLPSFPDTGGGDGAFNFDDPNSDYYIDPQEVRTEKMR 276

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASGAGGQHVN T+SA+R+TH+PTG+VV  Q  RSQH N+ +AW +LRAKL E   + RE+
Sbjct: 277 ASGAGGQHVNKTESAIRLTHMPTGIVVSMQDSRSQHANRKKAWQILRAKLAEARQEAREQ 336

Query: 295 I----ANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
                          +G G ++R+Y         D R+     +  +VL+G
Sbjct: 337 ELVELRRGAMGGIGRMGRGDKVRTYNYG-QSRCTDHRSGFTVHNLDNVLEG 386


>gi|326520682|dbj|BAJ92704.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 236

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 71/221 (32%), Positives = 128/221 (57%), Gaps = 8/221 (3%)

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
           +RMY R+ E   +K + +   + E+ G K+  + +KG   Y  LK E GVHR+ R+   +
Sbjct: 6   VRMYQRYCELNNWKFKPVSCSEAEKGGFKTYVMEVKGKQVYSKLKFESGVHRVQRVPQTE 65

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
           +  R HTS +++ + P   D +++ I   D  +   R+ GAGGQ+VN  ++A+ + H PT
Sbjct: 66  TMGRVHTSTATVAIMP-EADEVDVVIDPKDIELKAARSGGAGGQNVNKVETAIDLIHKPT 124

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS 314
           G+ + C +E+SQ +NK +A+ +LRAKLYE++L++++E  +I      ++G G    +IR+
Sbjct: 125 GIRIFCTEEKSQLQNKERAFQLLRAKLYEIKLREQQE--SIRTQRLLQVGTGARSEKIRT 182

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           Y  +    V D R  +     S  L GD++  +++  A+++
Sbjct: 183 YNYKD-NRVTDHRLKM-NFILSSFLLGDIESAIQSCAALEQ 221


>gi|312082910|ref|XP_003143641.1| peptidyl-tRNA hydrolase domain-containing protein [Loa loa]
 gi|307761198|gb|EFO20432.1| peptidyl-tRNA hydrolase domain-containing protein [Loa loa]
          Length = 384

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 92/355 (25%), Positives = 157/355 (44%), Gaps = 24/355 (6%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           +       F       +L+ L     +     +            HL+   +  +   D+
Sbjct: 17  RTETAQTYFQI--ISAKLNALQKDGNNESRINDSAS-------ITHLETVTTLARRFYDK 67

Query: 66  LCDNLILLELALEEDD--CSILQETSDNLQRIKLEVEYKQFESLLSGEADS---NDAYLE 120
           L     L  L  E +D     + +       ++L+    +   ++    +    N+  LE
Sbjct: 68  LGMLTELDMLLKEGNDAEIQKIAKLDSEQLTVELDSIVNELTDVVIPVTEYDSLNNCQLE 127

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           +  G GG E+  +A+ L  MY  +A+  K+K    ++      GI+SA + ++G  A+  
Sbjct: 128 IIPGVGGVEASLFASELAEMYHNYAQFMKWKWTPYQVDASPSGGIRSAVVFVRGNGAFRA 187

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           L+ E GVHR+ R    D   R HTS S + V P   + IE  ++ +D +++T RASG GG
Sbjct: 188 LRYEAGVHRVQRFPVTDKT-RMHTSTSVVAVLP-EPEKIEACVTPADVKVETMRASGPGG 245

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q+VN   +AVR+TH  TG+ V C  ER+Q+ N   A+  L A L + +L   E       
Sbjct: 246 QNVNQRSTAVRLTHRETGIAVHCVDERTQYSNMEIAYKRLAAILLQRKLD--ETQKQYSS 303

Query: 301 SSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD--LDDFMKAT 350
           S K ++G      ++R+Y  +  Q V D R        ++V+ G   LD  +++ 
Sbjct: 304 SRKLQVGTKARAEKVRTYNFKDDQ-VIDHRLGKAWQGVANVMKGSSVLDQIIQSL 357


>gi|71900150|ref|ZP_00682291.1| Class I peptide chain release factor [Xylella fastidiosa Ann-1]
 gi|71730099|gb|EAO32189.1| Class I peptide chain release factor [Xylella fastidiosa Ann-1]
          Length = 175

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 62/162 (38%), Positives = 100/162 (61%), Gaps = 7/162 (4%)

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +   +S  R HTS +++ + P  D+  +I I+ +D +IDT+R+SGAGGQHVN T+SA+RI
Sbjct: 1   MPATESQGRIHTSAATVAIIPEADEIADISINPADLKIDTFRSSGAGGQHVNKTESAIRI 60

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR-- 310
           TH+PTGVVV+ Q ERSQH N+ +A   L+A+L  +E ++ ++      + K ++G G   
Sbjct: 61  THLPTGVVVESQTERSQHANRDKAMKRLKAQL--IESERSQQATAEAMTRKLQVGSGDRS 118

Query: 311 -QIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDGDLDDFMKAT 350
            +IR+Y   P   + D R  N+      ++++GDLD  +   
Sbjct: 119 QRIRTYNF-PQGRITDHRVENLTLYDLPNIIEGDLDPLIDRL 159


>gi|330802966|ref|XP_003289482.1| hypothetical protein DICPUDRAFT_92304 [Dictyostelium purpureum]
 gi|325080440|gb|EGC33996.1| hypothetical protein DICPUDRAFT_92304 [Dictyostelium purpureum]
          Length = 226

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 80/216 (37%), Positives = 126/216 (58%), Gaps = 9/216 (4%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY  + E++ +K E LE    E  G +  T+ I G   +G+LK E GVHR+ R+   ++ 
Sbjct: 1   MYRNYCEQKGWKFETLESQSSEVGGFRDCTISISGKGVFGFLKYESGVHRVQRVPDTETQ 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ + P     ++++I + D ++D +R+SG GGQ VNTTDSAVR+TH+PTG+
Sbjct: 61  GRIHTSTITVAILP-EPKEVDLQIHDRDIKVDVFRSSGNGGQSVNTTDSAVRMTHLPTGI 119

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WGRQIRSYV 316
           VVQ Q ERSQ +N+A+A  +LRA++YE E Q+            ++IG      +IR+Y 
Sbjct: 120 VVQMQDERSQLQNRAKALKILRARVYEQERQRLHSERE--RERNSQIGNATRSERIRTYN 177

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGD-LDDFMKATL 351
             P   + D R +I   + S  ++ + L+ F+   L
Sbjct: 178 Y-PQDRITDHRVSI-NGNLSSCMEEEGLEGFIDEIL 211


>gi|224001842|ref|XP_002290593.1| peptide chain release factor 1 [Thalassiosira pseudonana CCMP1335]
 gi|220974015|gb|EED92345.1| peptide chain release factor 1 [Thalassiosira pseudonana CCMP1335]
          Length = 282

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 88/252 (34%), Positives = 137/252 (54%), Gaps = 19/252 (7%)

Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK----------RKFKTE 153
                  +  S+DA +++ AG GG E+  +A+ +L  Y   A+           + +  E
Sbjct: 36  LNPDDLQDLTSSDAVIDIRAGTGGDEACLFASEILACYEATAKAGGADESGNGGKSWDLE 95

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            L +   +  GIK A+L++K    YG+ + E GVHR+ R+   D+  +  TS  S+ V P
Sbjct: 96  FLSLSRTDLGGIKEASLILKQLGPYGFFQYESGVHRVQRVPVNDN--KLQTSAVSVAVLP 153

Query: 214 VVDDS-IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
            V DS I   +  ++ +I+T RASGAGGQHVNTT+SAVR+THIPTG++   Q+ERSQHKN
Sbjct: 154 SVPDSLIAEALPPTELKIETMRASGAGGQHVNTTESAVRVTHIPTGIMAYMQEERSQHKN 213

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTN 329
           KA+A  ++ +++Y L  +K +E  N   +  + +G      +IR+Y   P   + D R  
Sbjct: 214 KAKALKLVASRVYAL--RKEQERKNRSAARSSLMGGGDRSERIRTYNF-PQDRITDHRCK 270

Query: 330 IEKTSPSDVLDG 341
           +        L G
Sbjct: 271 VSVQGVQSWLGG 282


>gi|324506204|gb|ADY42656.1| Peptide chain release factor 1 [Ascaris suum]
          Length = 376

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 81/311 (26%), Positives = 141/311 (45%), Gaps = 18/311 (5%)

Query: 45  LMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQF 104
           L +E     + +  +  +     D   L  +A  E      +        +   +   + 
Sbjct: 56  LSKEFIMRRDELLQLNALMSAESDV-ELETMARNERVLLESELNDLARNIVDAVMPRTEL 114

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
                     +   LEV AG GG E+  + + L+ MY  +A  + +    ++  + +  G
Sbjct: 115 -------DVLSKCQLEVTAGVGGIEAMLFTSELVDMYRNFAAFKGWTWTVMQQDNIQLGG 167

Query: 165 IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
           ++SA + + G  AYG L+ E GVHR+ R+   D   R HTS +S+ V P   + ++  + 
Sbjct: 168 VRSALIAVSGDEAYGRLRFEAGVHRVQRMPITDKT-RMHTSTASVSVLP-EPEKVDAYVP 225

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            +  +I+T RASG GGQ+VN   +AVR+TH  +G+ V C  ER QH N   A+  L A L
Sbjct: 226 SNSVKIETMRASGPGGQNVNKRSTAVRVTHKSSGISVHCMDERFQHLNIQIAFRRLAAIL 285

Query: 285 YELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
            + ++ +  E      + K ++G      ++R+Y  +    V D R     +  +DV+ G
Sbjct: 286 MQEKMDRIYE--KSAAARKLQVGSKARAEKVRTYNFKD-DRVTDHRLKKSWSRVTDVMRG 342

Query: 342 --DLDDFMKAT 350
             +LD  +   
Sbjct: 343 GHELDAIINEL 353


>gi|213403996|ref|XP_002172770.1| peptide chain release factor 1 [Schizosaccharomyces japonicus
           yFS275]
 gi|212000817|gb|EEB06477.1| peptide chain release factor 1 [Schizosaccharomyces japonicus
           yFS275]
          Length = 312

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 79/246 (32%), Positives = 123/246 (50%), Gaps = 9/246 (3%)

Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
                 L        A LEV AG GG+E+  +A+ LL MY R+   R +K + L +   E
Sbjct: 31  MHKLLSLKPNNYQAPALLEVRAGVGGSEAALFASELLSMYERYCAFRNWKWKPLSLSKTE 90

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI-- 219
                +  ++    + YG L  E GVHR+ R    ++  R HTS  S+ V P V+     
Sbjct: 91  NGNGITEAIVSVSGHVYGELFHEAGVHRVQRTPATETKGRLHTSTVSVIVLPTVNSQTLE 150

Query: 220 -EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
            E ++  +D R+D  RA GAGGQHVN T+SAVR+THIP+G+ V  Q  RSQH+NK +A  
Sbjct: 151 TESKLDANDIRVDVMRAKGAGGQHVNRTESAVRLTHIPSGITVCMQDSRSQHENKERALL 210

Query: 279 MLRAKLYELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           +LR+++  L  +  +      ++ + ++       +IR+Y       + D R +      
Sbjct: 211 ILRSRVAALRHENLQ--KQQHDARRKQVSSPVRSEKIRTYNYA-QNRITDHRCSCSMYDT 267

Query: 336 SDVLDG 341
              ++G
Sbjct: 268 EGFMEG 273


>gi|159900504|ref|YP_001546751.1| ATPase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159893543|gb|ABX06623.1| ATPase AAA-2 domain protein [Herpetosiphon aurantiacus ATCC 23779]
          Length = 1027

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 74/353 (20%), Positives = 143/353 (40%), Gaps = 17/353 (4%)

Query: 2    KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            +L  +L  L    +   A +R + L  +   P  W +  +A+ L+ E  ++   +    +
Sbjct: 685  QLHNRLKHLIKQLNVVEARERQTELMDEMSSPSFWDDHEQAQFLLTELSNVARRVGRCDD 744

Query: 62   IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
            ++    D   LL+   E ++  +  E     +R++ ++ + + E L S   D +DAY+ +
Sbjct: 745  LRRLYDDADQLLQRIRERNERRLFPELMRMAKRLERDLRFAELEMLFSNPEDWHDAYIIL 804

Query: 122  HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
             +   G     W   L   Y  W+  ++F+ + ++    E+  +   TL I G  A+G L
Sbjct: 805  ESDQAGLR---WVRNLANAYLEWSLGKRFEAKVIDETPAEDN-LIRVTLQISGSGAFGLL 860

Query: 182  KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
            + E G HR+      +   +  T      +    +D+     S+ +  +   RA G   +
Sbjct: 861  RSEAGTHRISETGG-EPRLKTVTQVQITVLPVPTEDTPAPASSDIEMAVMNTRADGYFLR 919

Query: 242  HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
             +  T  A+                      +A    +L   L  L +++ ++     + 
Sbjct: 920  KLRVTGRAIH-------RYSGAAAFACAGSERAVREMLLSILLGRLAMKQLDDFIQPSDD 972

Query: 302  SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                  WG  +RSY L     +KD RT I  T+P   L G+LD F++A L  +
Sbjct: 973  -----AWGSVVRSYHLGKRSTIKDPRTEIVHTNPKAALAGELDLFIEAALRWR 1020


>gi|23335364|ref|ZP_00120601.1| COG1186: Protein chain release factor B [Bifidobacterium longum
           DJO10A]
          Length = 240

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 77/226 (34%), Positives = 121/226 (53%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +   +   +    D D     +  L T+   P LW +   A+ +       ++ +  +  
Sbjct: 12  EARAKYESIAKALDVDRLKADIKDLETQAAAPGLWDDPENAQKITSRLSAAESQLKRLNS 71

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
              R+ D   L+EL  EE D   L E    +  I+ +++  + ++LL GE D   A + +
Sbjct: 72  ASQRIDDVETLVELGHEEGDQDSLDEAQSEIGEIQKDLDQMEIQTLLDGEYDERSAVVTI 131

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            +GAGG ++ D+A MLLRMY R+ E+  FK + ++    EEAGIKSAT  +  P AYG L
Sbjct: 132 RSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRL 191

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
             E G HRLVRISP+D+  RR TSF+++ V P+V+ +  I+I  +D
Sbjct: 192 SVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPYTD 237


>gi|225685111|gb|EEH23395.1| peptide chain release factor 1 [Paracoccidioides brasiliensis Pb03]
          Length = 316

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 81/260 (31%), Positives = 129/260 (49%), Gaps = 26/260 (10%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT---EALEIHDGEEA 163
           +           LE+  GAGG E+  +AN LLRMYT +   R  +    +    + G   
Sbjct: 16  IPRHPFADLPCLLELRPGAGGDEAGIFANELLRMYTMFCANRGLRATLLKKESENAGASG 75

Query: 164 GIKSA----TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP------ 213
           G +       + I+ P +Y  L+ E GVHR+ R+   +S  R HTS  S+ + P      
Sbjct: 76  GSEDRLAEAVMEIETPGSYETLRTEAGVHRVQRVPATESKGRTHTSAVSVVILPSFPRNG 135

Query: 214 --------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
                     D + +  I   +  ++  RASGAGGQHVN T+SA+R+THIPTG+VV  Q 
Sbjct: 136 EEGDGELNFDDPNSDFYIDPQEVNVEKMRASGAGGQHVNKTESAIRLTHIPTGIVVGMQD 195

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKRE----EIANIGESSKTEIGWGRQIRSYVLQPYQ 321
            RSQH+N+ +AW +LRA++ +   + RE    ++         ++G G +IR+Y      
Sbjct: 196 SRSQHENRRKAWQLLRARIAQRRREAREEEMVKLRRGAMGGVGKMGRGDKIRTYNFG-QN 254

Query: 322 MVKDLRTNIEKTSPSDVLDG 341
              D R+ +   +  ++++G
Sbjct: 255 RCTDHRSGLTLHNLVNIMEG 274


>gi|60279679|ref|NP_001012512.1| peptide chain release factor 1, mitochondrial [Danio rerio]
 gi|58701973|gb|AAH90173.1| Zgc:113104 [Danio rerio]
          Length = 235

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 69/210 (32%), Positives = 109/210 (51%), Gaps = 8/210 (3%)

Query: 137 LLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPY 196
           +  MY  +A  + +  E       E  G+  A++ + G   + WLK E G HR+ RI   
Sbjct: 1   MFDMYQGFASYKNWDFELFNYTPAEYGGLHHASVRVSGECVFRWLKFEGGTHRVQRIPEV 60

Query: 197 DSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
             +SR     + +   +     + ++I+I+  D RIDT+R+ GAGGQHVNTTDSAVR+ H
Sbjct: 61  GLSSRMQRIHTGTMTVIVLPQMEEVDIDIAPKDLRIDTFRSRGAGGQHVNTTDSAVRLVH 120

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW---GRQ 311
           +PTG V +CQQ RSQ KN+  A  +LRA+L++  + ++ E      + + ++G      +
Sbjct: 121 LPTGTVSECQQFRSQLKNRETALRVLRARLHQCMMGQQRE--QTHTARRLQVGTRAQSER 178

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           IR+Y       V D R         + + G
Sbjct: 179 IRTYNF-TQDRVTDHRIGFVTRDIKEFMRG 207


>gi|256045467|ref|ZP_05448354.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 141

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 62/134 (46%), Positives = 90/134 (67%), Gaps = 7/134 (5%)

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
             D RIDT RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A  +LRA+L
Sbjct: 1   NEDIRIDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARL 59

Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           Y++E QK    +   ++ ++++G G    +IR+Y   P   V D R N+       V++G
Sbjct: 60  YDMERQK--AESERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEG 116

Query: 342 DLDDFMKATLAIKK 355
           +LD+ + A ++  +
Sbjct: 117 ELDELVDALISDHQ 130


>gi|307198741|gb|EFN79544.1| Peptide chain release factor 1-like, mitochondrial [Harpegnathos
           saltator]
          Length = 362

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 93/292 (31%), Positives = 149/292 (51%), Gaps = 16/292 (5%)

Query: 54  NAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113
             +  I+ +QD +  +  + +LA EE+     Q    +   + + +     E        
Sbjct: 51  QLVENIQNLQDLVKQDTEIKKLAEEEELVYKEQLDELDKNLLDIILADMCKEC------- 103

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
            ++  +E+ AG GG E+  +   L  MY  +AE      E L++   +  G ++ T+++ 
Sbjct: 104 CDNIIIEITAGVGGQEAMLFVKNLYEMYIGYAEYLGLCHEVLDMDTTDCNGYRNVTIIVS 163

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G       + E GVHR+ R+   +   R HTS +S+ + P+    +EI I+E D +I+T 
Sbjct: 164 GKQTSK-FRYEGGVHRVQRVPTTEKLGRVHTSTASVAILPI-PSEVEIVINERDLKIETK 221

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           RASG+GGQHVN T+SAVRITHIPTG++V+CQ  RSQ +NK  A   LR  +YE +L K+ 
Sbjct: 222 RASGSGGQHVNKTNSAVRITHIPTGLIVECQVHRSQIRNKKLAMMRLRNMMYEQQLNKQT 281

Query: 294 EIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDG 341
              +     K +IG G    ++R+Y       V D R  N    + S+ + G
Sbjct: 282 SFRSEL--RKKQIGMGFRNEKVRTYNYN-QDRVTDHRLQNGTFYNLSEFMQG 330


>gi|242087755|ref|XP_002439710.1| hypothetical protein SORBIDRAFT_09g018740 [Sorghum bicolor]
 gi|241944995|gb|EES18140.1| hypothetical protein SORBIDRAFT_09g018740 [Sorghum bicolor]
          Length = 409

 Score =  125 bits (314), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 79/362 (21%), Positives = 160/362 (44%), Gaps = 13/362 (3%)

Query: 3   LSRQLNCL--------GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN 54
           L +++               + + A QR+          +LW N  ++   +        
Sbjct: 51  LKKRIEDAVVRVETTASSALELEEA-QRIKQ-EEVLRKRNLWDNPAKSHETLSALADAIR 108

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEAD 113
            +  +K+++ +  +  ++ +L+  +     L + +          ++  Q   LL G  D
Sbjct: 109 VVDHLKDLRFKAEEAKLISQLSEMDAINGELFKQAYKSSVDASEYLDRYQMYKLLKGPYD 168

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
              A + V A + G  S+ WA  +  MYT WA K+ +K   +E        I+SA + I+
Sbjct: 169 KEGACIIVTAVSNGVTSELWAEKVFGMYTSWARKQGYKVGLIEKIFSTSGHIQSAAMEIE 228

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
               +G L GE+G+H+++  S  +S+  +  S     +   +D  +++ + + D  I+T 
Sbjct: 229 SEYMFGTLSGEKGMHQMIYSSLENSDIDQALSARVDIIPLFLDRPVDLHLDDGD--IETS 286

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
            +     +      +AVR+ H+P+GV  +   ERS   NK +A + L+AKL  +  + R 
Sbjct: 287 PSPSVHKKRGRRNGAAVRVQHVPSGVTAESSGERSYFANKLKATSRLKAKLLLVARELRV 346

Query: 294 EIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
               +      E     + R Y   P+++V DL T I+ +  + VL+GD++ F++  +  
Sbjct: 347 SDVKLINRQAIEDKCNSETRRYTFGPHKLVHDLNTGIQLSDLNSVLEGDIEPFIRGRVTS 406

Query: 354 KK 355
           ++
Sbjct: 407 RQ 408


>gi|56755637|gb|AAW25997.1| SJCHGC05491 protein [Schistosoma japonicum]
          Length = 431

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 88/374 (23%), Positives = 154/374 (41%), Gaps = 43/374 (11%)

Query: 14  FD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           FD    N + +   ++          +      L    + L   +  I+E+   L  +  
Sbjct: 42  FDAFKKNTISKYEDISKLMTSGA--GDCDLL-SLSESWKKLRPLVDVIEELDILLEADKE 98

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS------------NDAYL 119
           + +L  +        + +D     +LE + +        +               +   +
Sbjct: 99  VEQLVADIVGTDAEDDVNDLKALAELEHKQRNILREALEKKLLNLLLPVDQRDLESTVIM 158

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL-------------------EIHDG 160
           E+ AGAGG E+  +A+ LL MY   A +R +                             
Sbjct: 159 ELFAGAGGKEAGLFAHDLLIMYQALAIQRNWSFNIKQETVMSSEECTPSHNEKSLSYVRV 218

Query: 161 EEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIE 220
           E  G  +A   I    AYG LK E GVHR+ R+    S ++ HTS  ++ + P   D   
Sbjct: 219 EIQGEPTAESGILSLGAYGQLKWEAGVHRVQRVPVTSSQNKIHTSTVAVSIQPNYGDVDV 278

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
              S+ D + + +R +G GGQ++N + SAVR+TH+PTG++V CQ+ER QH NK  A  ML
Sbjct: 279 DI-SDDDLKWEFHRPTGPGGQNLNKSTSAVRLTHLPTGIIVSCQRERHQHTNKKHALGML 337

Query: 281 RAKLYELELQKREEIANIGESSK-TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           + KL +++L+ +  + +    S    +    +IR+Y   P   + D R      +    +
Sbjct: 338 KEKLRDIQLKSQLHLIDSIRQSHLGNLDRSEKIRTYNF-PQDRITDHRLGNSWNNLHRFM 396

Query: 340 D---GDLDDFMKAT 350
               G L + +++ 
Sbjct: 397 KQAVG-LSELIESL 409


>gi|323446989|gb|EGB02968.1| hypothetical protein AURANDRAFT_12526 [Aureococcus anophagefferens]
          Length = 305

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 99/263 (37%), Positives = 138/263 (52%), Gaps = 29/263 (11%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             +EV A AGG E+  +A  LL MY R+A +R+   + L +   +  G+  A   +KGP 
Sbjct: 44  CLVEVKAAAGGDEASLFAGDLLAMYERFAGRRRHGWDLLSVTKSDCGGVSHAYAEVKGPG 103

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV--VDDSIEIEISESDCRIDTYR 234
           AYG L+ E GVHR+ R+   D   R HTS +S+ V+P    D    ++   ++ RIDT+R
Sbjct: 104 AYGALRFESGVHRVQRVPRNDV--RIHTSTASVVVFPAGAEDRGATVDFDPAELRIDTFR 161

Query: 235 ASGAGGQH------------------VNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           ASGAGGQH                  VNTT+SAVR+TH+PTG VV  Q ERSQH+NKA+A
Sbjct: 162 ASGAGGQHATTRMEIFNPTSMRAYQNVNTTNSAVRVTHLPTGTVVSIQDERSQHRNKAKA 221

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
             +L +++   +       A    S     G G    +IR+Y   P+  V D R+     
Sbjct: 222 LKVLASRVVGAQA--AAAAAARSASRAKLAGSGDRAERIRTYN-APHDRVTDHRSGFTAN 278

Query: 334 SPSDVLDGD-LDDFMKATLAIKK 355
           S   VL GD LDD + +  A  +
Sbjct: 279 SVDRVLRGDLLDDVVASLEAADR 301


>gi|71008811|ref|XP_758238.1| hypothetical protein UM02091.1 [Ustilago maydis 521]
 gi|46097913|gb|EAK83146.1| hypothetical protein UM02091.1 [Ustilago maydis 521]
          Length = 526

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 91/367 (24%), Positives = 162/367 (44%), Gaps = 45/367 (12%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              QRL  L           + +++  + ++ + LD       +   +    +  + ++ 
Sbjct: 138 EKRQRLLELT----------DGVDSADIGKQLKELDPLRQAWDKFSAKRKQLISTISISQ 187

Query: 78  EEDDCSIL-------QETSDNLQRIKLEVEYKQFESLLSGEADSN-DAYLEVHAGAGGTE 129
            + D  +            + L  ++ +++    ES+          A LEV  G GG E
Sbjct: 188 NDPDEDMRALASEEILLLEEELLELRSDMQELILESVTDPIEAKAVGAVLEVRPGVGGQE 247

Query: 130 SQDWANMLLRMYTRWAEKR--------KFKTEA--------LEIHDGEEAGIKSATLLIK 173
           S  +   + RMY R+ E++        +++ E              G  +G+K A + +K
Sbjct: 248 STLFTAEVARMYQRFCEQKPVEEDGSGEWQVEMLSSTSVDVSTSSSGSGSGLKEAIIEVK 307

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE---ISESDCRI 230
           G   +  LK E GVHR+ RI    S  +  TS  ++ V P+ + S       +   D ++
Sbjct: 308 GKGVFKKLKYEAGVHRVQRIPSTQSLGKLQTSTIAVMVLPISEGSEHKADDLVDPKDVKV 367

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           +  R+ GAGGQHVN T+SA+R+TH PTG+ V  Q  RSQH+N+ +AW +LRA+L +  L+
Sbjct: 368 EVMRSRGAGGQHVNKTESAIRLTHEPTGISVSMQDSRSQHQNRTKAWAVLRARLLDRRLK 427

Query: 291 KREEIANIGE-SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD------L 343
           +  E       +    +    ++R+Y   P   V D R N+       +++G+      L
Sbjct: 428 QEVEGNRERRLAQVASMDRSDRVRTYNF-PQDRVTDHRINLSLNGIDAIMEGEHDPGTGL 486

Query: 344 DDFMKAT 350
           D  M++ 
Sbjct: 487 DYIMESL 493


>gi|323964710|gb|EGB60181.1| peptide chain release [Escherichia coli M863]
          Length = 160

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 63/152 (41%), Positives = 98/152 (64%), Gaps = 6/152 (3%)

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
            ++ V P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ E
Sbjct: 1   MTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDE 60

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMV 323
           RSQHKNKA+A ++L A+++  E+ KR++      + +  +G G    + R+Y   P   V
Sbjct: 61  RSQHKNKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDRNRTYNF-PQGRV 117

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            D R N+      +V++G LD  ++  +   +
Sbjct: 118 TDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQ 149


>gi|62719461|gb|AAX93331.1| peptide chain release factor 2 [Lactobacillus sanfranciscensis]
          Length = 156

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 84/156 (53%), Positives = 108/156 (69%), Gaps = 1/156 (0%)

Query: 178 YGWLKGEQGV-HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           YG+LK  +G    LVR+SP+DS  RRHTS +S+ V P +D++   +I+  D RID +R+S
Sbjct: 1   YGYLKIRKGEFIGLVRLSPFDSAGRRHTSLASVNVMPELDENANGDINPDDLRIDVFRSS 60

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQH+N T SAVRITH+PTG+V   Q +RSQ +N+  A NML++KLYELE +K+ E  
Sbjct: 61  GAGGQHINKTSSAVRITHLPTGIVTSSQAQRSQLQNRVTAMNMLKSKLYELEEEKKAEEK 120

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEK 332
              E  + EIGWG QIRSYV  PY MVKD  T  E 
Sbjct: 121 AKIEGKQLEIGWGSQIRSYVFHPYTMVKDHGTGHET 156


>gi|332027664|gb|EGI67732.1| Peptide chain release factor 1-like, mitochondrial [Acromyrmex
           echinatior]
          Length = 406

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 89/292 (30%), Positives = 150/292 (51%), Gaps = 8/292 (2%)

Query: 57  SFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL---SGEAD 113
           S   E    + +   L  L  ++ +   L +    L + +L    ++   ++     +  
Sbjct: 88  SLFNERIQLVENIQNLHNLGQQDIEIKKLADEETMLYKEQLNELDERLLHMILTNMCKDF 147

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
            ++  +E+ AG GG E+  +   L  MY  +A+      E ++I   +  GI+  +++I 
Sbjct: 148 YSNIIIEITAGVGGQEAMLFVKDLYDMYIDYAKCLDLDHEVIDIEMTDNKGIRHVSIMIS 207

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G       + E GVHR+ R+   + + R HTS +S+ + P V   I+I I+E+D +I+T 
Sbjct: 208 GDQVDK-FQHEGGVHRVQRVPATEKSGRVHTSTASVAILP-VPSEIQIMINENDLKIETK 265

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R+SGAGGQHVNTTDSAVRITH+P+G+ V CQ +RSQ++NK  A + LR+ LYE +L K+ 
Sbjct: 266 RSSGAGGQHVNTTDSAVRITHLPSGLSVTCQVDRSQNRNKKIAMDKLRSILYEQQLNKQT 325

Query: 294 EIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNIE-KTSPSDVLDGDL 343
              +     +  +G    +IR+Y       V D R       +  + + G +
Sbjct: 326 SFTSKLRQKQMGMGFRNEKIRTYNYN-QNRVTDHRLGQNGTFNLIEFMQGGI 376


>gi|71000757|ref|XP_755060.1| mitochondrial translation release factor (RF-1) [Aspergillus
           fumigatus Af293]
 gi|66852697|gb|EAL93022.1| mitochondrial translation release factor (RF-1), putative
           [Aspergillus fumigatus Af293]
 gi|159128074|gb|EDP53189.1| mitochondrial translation release factor (RF-1), putative
           [Aspergillus fumigatus A1163]
          Length = 256

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 73/208 (35%), Positives = 102/208 (49%), Gaps = 21/208 (10%)

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP------------ 213
             A + I    AY  L+ E GVHR+ R+   ++  R HTS  S+ V P            
Sbjct: 30  SEAVVEIDADGAYDLLRTESGVHRVQRVPATETKGRTHTSAVSVMVLPSFPEAGPSMDSA 89

Query: 214 --VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
               D + +  +   + R +  RASGAGGQHVN T+SA+R+THIPTG+VV  Q  RSQH 
Sbjct: 90  LNFDDPNSDYYVDPQEVRTEKMRASGAGGQHVNKTESAIRLTHIPTGIVVSMQDSRSQHA 149

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           N+ +AW +LRAKL E   + RE+               +G G +IR+Y         D R
Sbjct: 150 NRKKAWQVLRAKLAEARQEAREQELVELRRGVLGGVARMGRGDKIRTYNYG-QSRCTDHR 208

Query: 328 TNIEKTSPSDVLDGD--LDDFMKATLAI 353
           + I   +  +VLDG   L+  M +    
Sbjct: 209 SGITVHNLDNVLDGGESLETIMDSVRTW 236


>gi|265991893|ref|ZP_06104450.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263002901|gb|EEZ15252.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 133

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 57/126 (45%), Positives = 85/126 (67%), Gaps = 7/126 (5%)

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASGAGGQHVNTTDSAVRITHIPTG++V  Q E+SQH+N+A+A  +LRA+LY++E QK 
Sbjct: 1   MRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK- 58

Query: 293 EEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              +   ++ ++++G G    +IR+Y   P   V D R N+       V++G+LD+ + A
Sbjct: 59  -AESERSQARRSQVGSGDRSERIRTYNF-PQGRVTDHRINLTLYKLDRVMEGELDELVDA 116

Query: 350 TLAIKK 355
            ++  +
Sbjct: 117 LISDHQ 122


>gi|119493428|ref|XP_001263904.1| mitochondrial peptide chain release factor [Neosartorya fischeri
           NRRL 181]
 gi|119412064|gb|EAW22007.1| mitochondrial peptide chain release factor [Neosartorya fischeri
           NRRL 181]
          Length = 256

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 73/208 (35%), Positives = 101/208 (48%), Gaps = 21/208 (10%)

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP------------ 213
             A + I    AY  L+ E GVHR+ R+   ++  R HTS  S+ V P            
Sbjct: 30  SEAVVEIDADGAYDLLRTESGVHRVQRVPATETKGRTHTSAVSVMVLPSFPEAGASMDSA 89

Query: 214 --VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
               D   +  +   + R +  RASGAGGQHVN T+SA+R+THIPTG+VV  Q  RSQH 
Sbjct: 90  LNFDDPDSDYYVDPQEVRTEKMRASGAGGQHVNKTESAIRLTHIPTGIVVSMQDSRSQHA 149

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           N+ +AW +LRAKL E   + RE+               +G G +IR+Y         D R
Sbjct: 150 NRKKAWQVLRAKLAEARQEAREQELVELRRGVLGGVARMGRGDKIRTYNYG-QSRCTDHR 208

Query: 328 TNIEKTSPSDVLDGD--LDDFMKATLAI 353
           + I   +  +VLDG   L+  M +    
Sbjct: 209 SGITVHNLDNVLDGGESLETIMDSVRTW 236


>gi|17542784|ref|NP_500737.1| hypothetical protein W03F8.3 [Caenorhabditis elegans]
 gi|6093954|sp|O44568|RF1M_CAEEL RecName: Full=Probable peptide chain release factor 1,
           mitochondrial; Short=MRF-1; Short=MtRF-1; Flags:
           Precursor
 gi|2736385|gb|AAB94190.1| Hypothetical protein W03F8.3 [Caenorhabditis elegans]
          Length = 389

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 86/314 (27%), Positives = 148/314 (47%), Gaps = 15/314 (4%)

Query: 42  AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101
            + + ++   + +  S + +++  + D     E+    +      E +   +  +L V  
Sbjct: 67  WESISKQSAKVSDGRSELSQLRTIINDPKETEEMRKLAEVDVESIEENLETELQELAV-- 124

Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
                 L+     +   +E+  GAGG E+  +   LL MY + A    +K + L++ +  
Sbjct: 125 --KIVPLNNLDVLSKCQIELSCGAGGQEAMLFTGELLDMYQKLAAVNSWKWDPLQVDNVP 182

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
             G++SA + + G   Y  ++ E GVHR+ R+   DS  R HTS +SI V P  ++   +
Sbjct: 183 LGGVRSALIAVSGEKVYAKMRFEAGVHRVQRVPVNDS--RMHTSTASISVLPEPEEVSVV 240

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
             S+S  +I+  RASG GGQ+VN   +AVR+TH  TG+ V C  ER QH N   A+  L 
Sbjct: 241 VPSDSV-KIEAMRASGPGGQNVNKRSTAVRMTHKETGIAVHCMDERFQHLNIQIAYKRLA 299

Query: 282 AKLYELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           A L + ++    E   I    K ++G      +IR+Y  Q +  V D R  +  T  ++ 
Sbjct: 300 AILMQKQVDAMLE--KIVSKRKLQVGSKARAEKIRTYNFQ-HDRVTDHRIQMSITGVAEF 356

Query: 339 L-DGD-LDDFMKAT 350
           L  G+ L   ++  
Sbjct: 357 LSAGETLQTMIERL 370


>gi|237830659|ref|XP_002364627.1| peptide chain release factor 1, putative [Toxoplasma gondii ME49]
 gi|211962291|gb|EEA97486.1| peptide chain release factor 1, putative [Toxoplasma gondii ME49]
 gi|221507504|gb|EEE33108.1| peptide chain release factor, putative [Toxoplasma gondii VEG]
          Length = 545

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 80/255 (31%), Positives = 135/255 (52%), Gaps = 3/255 (1%)

Query: 88  TSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
                 + +   +   F+     +A   DA LE+ AG GG ++  ++  LL MY  ++  
Sbjct: 250 KEKKNAQEEKRDKSMIFDPENDEQALQGDAVLEIQAGVGGEDAALFSRDLLGMYEAFSLA 309

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
           R +    L+I + E+ G + A+  ++GP+A+  L  E G+HR+ R+ P ++  R  TS +
Sbjct: 310 RGWVFRVLDIQETEKGGYRRASAQVEGPDAFRLLSLEAGIHRVQRVPPTEARGRMQTSAT 369

Query: 208 SIWVYPVVDD-SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           ++ V P   +   +I++S    +ID  RASG GGQ VN +++AVRITH PTGV V C + 
Sbjct: 370 AVTVLPRSGNLEDKIDLSPPTLKIDFMRASGPGGQSVNKSETAVRITHKPTGVSVHCMRT 429

Query: 267 RSQHKNKAQAWNMLRAKLYELELQKREEIANIG-ESSKTEIGWGRQIRSYVLQPYQMVKD 325
           +SQ +NK+ A  +LRA+L +  +++  E      ++ K       +IR+Y  Q   +V D
Sbjct: 430 QSQMENKSLALELLRAQLLQQLMRQASEERGRALDAQKGSKDRSEKIRTYNFQ-RDVVTD 488

Query: 326 LRTNIEKTSPSDVLD 340
            R  +      + LD
Sbjct: 489 HRCRMHVNGVEEFLD 503


>gi|308454222|ref|XP_003089760.1| hypothetical protein CRE_07913 [Caenorhabditis remanei]
 gi|308269005|gb|EFP12958.1| hypothetical protein CRE_07913 [Caenorhabditis remanei]
          Length = 390

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 89/342 (26%), Positives = 153/342 (44%), Gaps = 20/342 (5%)

Query: 16  WDNAVQRLSFLNT--KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
               ++RL        +  P         + + ++   + +  S + ++   + D     
Sbjct: 43  LKTVIERLKECQEGNASAAPEQIS---YWEAIAKQASIVSDTRSELSQLNSIINDLKETE 99

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E+    +      + +   +  +L          L+     +   +E+ +GAGG E+  +
Sbjct: 100 EMRKLAEGDVESIKETLESELQELATRV----VPLNNLDVLSKCQIELSSGAGGQEAMLF 155

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
              LL MY + A    +K + L++ +    G++SA + + G N Y  ++ E GVHR+ R+
Sbjct: 156 TGELLDMYQKLAASNSWKWDPLQVDNVPLGGVRSALIAVSGENVYAKMRFEAGVHRVQRV 215

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              DS  R HTS SSI V P  ++   +  S+S  +I+  RASG GGQ+VN   +AVR+T
Sbjct: 216 PVNDS--RMHTSTSSISVLPEPEEVSVVVPSDSV-KIEAMRASGPGGQNVNKRSTAVRMT 272

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WGR 310
           H  TG+ V C  ER QH N   A+  L A L + ++    E   I    K ++G      
Sbjct: 273 HKETGIAVHCMDERFQHLNIQIAYKRLAAILMQRQVDAMLE--KIVSRRKLQVGSKARAE 330

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGD-LDDFMKAT 350
           +IR+Y  Q +  V D R  +  T  ++ L  G+ L   +   
Sbjct: 331 KIRTYNFQ-HDKVTDHRIQMAITGVNEFLSAGETLHAMIDRL 371


>gi|315254829|gb|EFU34797.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli MS 85-1]
          Length = 155

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 62/147 (42%), Positives = 95/147 (64%), Gaps = 6/147 (4%)

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
            P + D+   +I+ +D RIDT+R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHK
Sbjct: 1   MPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHK 60

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRT 328
           NKA+A ++L A+++  E+ KR++      + +  +G G    + R+Y   P   V D R 
Sbjct: 61  NKAKALSVLGARIHAAEMAKRQQ--AEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRI 117

Query: 329 NIEKTSPSDVLDGDLDDFMKATLAIKK 355
           N+      +V++G LD  ++  +   +
Sbjct: 118 NLTLYRLDEVMEGKLDMLIEPIIQEHQ 144


>gi|145627801|ref|ZP_01783602.1| peptide chain release factor 2 [Haemophilus influenzae 22.1-21]
 gi|144979576|gb|EDJ89235.1| peptide chain release factor 2 [Haemophilus influenzae 22.1-21]
          Length = 174

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 71/165 (43%), Positives = 105/165 (63%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           L C GG+FD+D  V+RL  +N + E P +W    +A+ L +ER  L+  ++ IK ++  L
Sbjct: 7   LQCFGGIFDFDAKVERLEEVNAELEQPDVWNAPDKAQALGKERVSLEQVVNTIKNLEQGL 66

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            D   LLELA+E +D     E    L  ++ ++E  +F  +  GE D+ D Y+++ AG+G
Sbjct: 67  EDVDGLLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFGGEHDACDCYVDLQAGSG 126

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           GTE+QDW  MLLRMY RWAE + FKTE +E+ DG+ AG+KSAT+ 
Sbjct: 127 GTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIK 171


>gi|163803524|ref|ZP_02197393.1| protein chain release factor B [Vibrio sp. AND4]
 gi|159172659|gb|EDP57512.1| protein chain release factor B [Vibrio sp. AND4]
          Length = 103

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 58/101 (57%), Positives = 72/101 (71%), Gaps = 1/101 (0%)

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           +TH+PT  VVQCQ +RSQHKNK QA   LRAKL+ELELQK+       E +K++IGWG Q
Sbjct: 1   MTHVPTNTVVQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEDAKSDIGWGSQ 60

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           IRSYVL     +KDLRT +E  +   VLDGDLD F++A+L 
Sbjct: 61  IRSYVLDD-SRIKDLRTGVENRNTQAVLDGDLDKFIEASLK 100


>gi|121704606|ref|XP_001270566.1| mitochondrial peptide chain release factor [Aspergillus clavatus
           NRRL 1]
 gi|119398712|gb|EAW09140.1| mitochondrial peptide chain release factor [Aspergillus clavatus
           NRRL 1]
          Length = 251

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 74/208 (35%), Positives = 100/208 (48%), Gaps = 21/208 (10%)

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP------------ 213
             A + I    AY  L+ E GVHR+ R+   ++  R HTS  S+ V P            
Sbjct: 30  SEAVIEIDAGGAYDLLRTESGVHRVQRVPATETKGRTHTSAVSVMVLPSFPDTATGAEGA 89

Query: 214 --VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
               D + +  I   + R +  RASGAGGQHVN T+SA+R+THIPTG VV  Q  RSQH 
Sbjct: 90  LNFDDPNSDYYIDPQEVRTEKMRASGAGGQHVNKTESAIRLTHIPTGTVVSMQDSRSQHA 149

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           N+ +AW +LRAKL E   + RE+               +G G +IR+Y         D R
Sbjct: 150 NRKKAWQVLRAKLAEARQESREQELVELRRGVLGGVARMGRGDKIRTYNYG-QSRCTDHR 208

Query: 328 TNIEKTSPSDVLDG--DLDDFMKATLAI 353
           + I   +  D+L G   LD  M +    
Sbjct: 209 SGITVHNLDDILGGGQGLDTVMDSVRTW 236


>gi|268552039|ref|XP_002634002.1| Hypothetical protein CBG20109 [Caenorhabditis briggsae]
 gi|187023852|emb|CAP37210.1| hypothetical protein CBG_20109 [Caenorhabditis briggsae AF16]
          Length = 389

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 82/301 (27%), Positives = 139/301 (46%), Gaps = 13/301 (4%)

Query: 42  AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101
            + + ++   + +    + ++   + D     E+    +      + +      +L    
Sbjct: 67  WEAIAKQSSVVSDTRFELAQLNSIIKDPNETEEMRKLAEADVESLKETLETGLKELAARV 126

Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
                 L+     +   +E+ +GAGG E+  +   LL MY + A    +K + L++    
Sbjct: 127 ----VPLTNLDVLSKCQIELSSGAGGQEAMLFTGELLDMYQKLAATNSWKWDPLQVDSVP 182

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
             G++SA + + G N Y  ++ E GVHR+ R+   DS  R HTS +SI V P  ++   +
Sbjct: 183 LGGVRSALIAVSGENVYSKMRFEAGVHRVQRVPVNDS--RMHTSTASISVLPEPEEVSVV 240

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
             S+S  +I+  RASG GGQ+VN   +AVR+TH  TG+ V C  ER QH N   A+  L 
Sbjct: 241 VPSDSV-KIEAMRASGPGGQNVNKRSTAVRMTHKETGIAVHCMDERFQHLNIQIAYKRLA 299

Query: 282 AKLYELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVKDLRTNIEKTSPSDV 338
           A L + ++    E   I    K ++G      +IR+Y  Q +  V D R  +  T   + 
Sbjct: 300 AILMQRQVDAMLE--KIVSRRKLQVGSKARAEKIRTYNFQ-HDKVTDHRIGMAITGVEEF 356

Query: 339 L 339
           L
Sbjct: 357 L 357


>gi|297604413|ref|NP_001055378.2| Os05g0375600 [Oryza sativa Japonica Group]
 gi|255676317|dbj|BAF17292.2| Os05g0375600 [Oryza sativa Japonica Group]
          Length = 407

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 68/321 (21%), Positives = 133/321 (41%), Gaps = 10/321 (3%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
           +LW N  ++   +         +  +K+++ +  +  ++ +L+  +     L + +    
Sbjct: 95  NLWDNPAKSHETLSALADAIRVVDHLKDLRYKAEEAKLISQLSEMDVINVELFKQAYKTS 154

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
               E   +     L       +    +               +  MY+ WA K+  K  
Sbjct: 155 VDATEFLDRYQMYKLLKGPYDKEGACIIVTAGSD-------ERIFCMYSSWARKQGCKDG 207

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            +E        + +A + I+    +G L GE+G HR++  S  ++ +   TS     +  
Sbjct: 208 LVEKITSTSGRVWTAAIEIESEYMFGTLTGEKGTHRMIYPSVDNAGTYEATSARVDIIPL 267

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
            +D  + + + E+D  I    +      H N   SA+R+ HI TGV  +   ERS   NK
Sbjct: 268 FLDRPVNLHLDENDLEISPSPSDHKRRDHRN---SAIRVQHIRTGVTAESSGERSYFANK 324

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKT 333
            +A + L+AKL  +  + R       +    E  + R+ R Y   P ++V DL T ++ +
Sbjct: 325 MKAISRLKAKLLVISRELRSSNLKTIKRQTVEELYSRETRRYKFGPQKLVHDLNTGLQLS 384

Query: 334 SPSDVLDGDLDDFMKATLAIK 354
             + VLDGD+D F++  +  +
Sbjct: 385 ELNSVLDGDIDPFIRGRIVSR 405


>gi|308478247|ref|XP_003101335.1| hypothetical protein CRE_13471 [Caenorhabditis remanei]
 gi|308263236|gb|EFP07189.1| hypothetical protein CRE_13471 [Caenorhabditis remanei]
          Length = 390

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 89/342 (26%), Positives = 151/342 (44%), Gaps = 20/342 (5%)

Query: 16  WDNAVQRLSFLNT--KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
               ++RL        +  P         + + ++   + +  S + ++   + D     
Sbjct: 43  LKTVIERLKECQEGNASAAPEQIS---YWEAIAKQAAIVSDTRSELFQLNSIINDLKETE 99

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E+    +      + +   +   L          L+     +   +E+ +GAGG E+  +
Sbjct: 100 EMRKLAEGDVESIKETLESELQVLATRV----VPLNNLDVLSKCQIELSSGAGGQEAMLF 155

Query: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
              LL MY + A    +K + L++ +    G++SA + + G N Y  ++ E GVHR+ R+
Sbjct: 156 TGELLDMYQKLAASNSWKWDPLQVDNVPLGGVRSALIAVSGENVYAKMRFEAGVHRVQRV 215

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
              DS  R HTS SSI V P  ++   +  S+S  +I+  RASG GGQ+VN   +AVR+T
Sbjct: 216 PVNDS--RMHTSTSSISVLPEPEEVSVVVPSDSV-KIEAMRASGPGGQNVNKRSTAVRMT 272

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WGR 310
           H  TG+ V C  ER QH N   A+  L A L + ++    E   I    K ++G      
Sbjct: 273 HKETGIAVHCMDERFQHLNIQIAYKRLAAILMQRQVDAMLE--KIVSRRKLQVGSKARAE 330

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVL-DGD-LDDFMKAT 350
           +IR+Y  Q +  V D R  +  T   + L  G+ L   +   
Sbjct: 331 KIRTYNFQ-HDKVTDHRIQMAITGVDEFLSAGETLHAMIDRL 371


>gi|331674376|ref|ZP_08375136.1| peptide chain release factor 2 (RF-2) [Escherichia coli TA280]
 gi|331068470|gb|EGI39865.1| peptide chain release factor 2 (RF-2) [Escherichia coli TA280]
          Length = 184

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 91/184 (49%), Positives = 117/184 (63%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            E P +W     A+ L +ER  L+  +  + +++  L D   LLELA+E DD     E  
Sbjct: 1   MEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEADDEETFNEAV 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             L  ++ ++   +F  + SGE DS D YL++ AG+GGTE+QDWA+ML RMY RWAE R 
Sbjct: 61  AELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRG 120

Query: 150 FKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           FKTE +E  +GE AGIKS T+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSFSS 
Sbjct: 121 FKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSA 180

Query: 210 WVYP 213
             YP
Sbjct: 181 VCYP 184


>gi|242021553|ref|XP_002431209.1| peptide chain release factor, putative [Pediculus humanus corporis]
 gi|212516458|gb|EEB18471.1| peptide chain release factor, putative [Pediculus humanus corporis]
          Length = 413

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 68/285 (23%), Positives = 122/285 (42%), Gaps = 9/285 (3%)

Query: 67  CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
            + L    +          +E    +  +      ++         + +   + +    G
Sbjct: 76  DNFLEKKYIEEIRHSIDKKKEIECEILALNTVNSEEKILPHNFDGGEESQIEIHIFPAVG 135

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQG 186
           G E++ +A  L  MY  +   + +     EI    + G     L ++G   Y  L  E G
Sbjct: 136 GEEAKYFAEELFNMYVNYIIYKNWNCIRAEIKQDTKVGH----LTLQGNTIYNSLICEAG 191

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           VHR+ R+   +   R HTS  S+ ++     + EI I+  D  I+T R+ G GGQ+VN  
Sbjct: 192 VHRVQRVPETEKFGRTHTSTCSLNIF-QKSLNNEIIINPKDIIIETLRSGGPGGQNVNKV 250

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-GESSKTE 305
           ++ VRI HIPTG++++ Q+ R Q++NK +A+  L++ L  +   K         +     
Sbjct: 251 ETRVRIKHIPTGLIIESQESRYQYENKIKAFKKLQSTLLNMYEDKINSSKKATLKDQTGN 310

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMK 348
             +  +IR+Y       + D R N    +    L G  +LDD ++
Sbjct: 311 NDYSDKIRTYNFN-QNRITDHRINYSLYNMDAFLSGGKELDDMIE 354


>gi|253795640|ref|YP_003038736.1| putative peptide chain release factor RF1 [Candidatus Hodgkinia
           cicadicola Dsem]
 gi|253739948|gb|ACT34283.1| putative peptide chain release factor RF1 [Candidatus Hodgkinia
           cicadicola Dsem]
          Length = 240

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 89/233 (38%), Positives = 128/233 (54%), Gaps = 3/233 (1%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA 177
            LE+ AG GG E+  +A+ LLRMY R+A K +++    E+  G + GIK A   + G   
Sbjct: 1   MLELRAGVGGREAGLFASQLLRMYERFAAKMRWRVTLTEVSFGCDGGIKRAVADVVGEGV 60

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
             WL  E GVHR+ R+   ++  R HTS  ++ + P    S E+ +  SD +I+T RASG
Sbjct: 61  GLWLAHEAGVHRVQRVPKTETRGRVHTSTVTLALLPSAGASCELGLLNSDLKIETMRASG 120

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           AGGQHVNTTDSAVRITH+PTGV   C   RSQH+N+A A  +LR ++    L      A 
Sbjct: 121 AGGQHVNTTDSAVRITHLPTGV-TACASCRSQHQNRAMALKLLRERVAARALSNAAADAA 179

Query: 298 IGESSK-TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
              +++  +     + R+Y       V D +        + VLDG+L   ++A
Sbjct: 180 GVRAAQVADGARAHRARTYSFV-MDKVTDHKLGRSVVGVARVLDGELQLLVRA 231


>gi|30694592|ref|NP_191278.2| peptide chain release factor, putative [Arabidopsis thaliana]
 gi|332646104|gb|AEE79625.1| putative peptide chain release factor [Arabidopsis thaliana]
          Length = 406

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 79/325 (24%), Positives = 155/325 (47%), Gaps = 13/325 (4%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
            LW +  ++  ++ +      A+  +K+++ +  +  ++++L   +     L E + +  
Sbjct: 87  DLWDDPAKSDEILLKLADRAKAVDSLKDLKYKAEEAKLIIQLGEMDAIDYSLFEQAYDSS 146

Query: 94  RIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
                   + +   LL  + D+  A + + +G+ G +SQ W   ++ MY +WAE+     
Sbjct: 147 LDVSRSLHHYEMSKLLRDQYDAEGACMIIKSGSPGAKSQIWTEQVVSMYIKWAERLGQNA 206

Query: 153 EALEIHD--GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
              E       ++G+ SAT+  +   AYG+L GE+GVHRL+      S S    S +   
Sbjct: 207 RVAEKCSLLSNKSGVSSATIEFEFEFAYGYLLGERGVHRLI----ISSTSNEECSATVDI 262

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           +   +  S + E+ E D  +     S    +     ++ V I HIP+GV +Q   ER++ 
Sbjct: 263 IPLFLRASPDFEVKEGDLIV-----SYPAKEDHKIAENMVCIHHIPSGVTLQSSGERNRF 317

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
            N+ +A N L+AKL  +  +++    N    SK  +    + RSYV + ++MV D +T +
Sbjct: 318 ANRIKALNRLKAKLLVIAKEQKVSDVNKI-DSKNILEPREETRSYVSKGHKMVVDRKTGL 376

Query: 331 EKTSPSDVLDGDLDDFMKATLAIKK 355
           E      VLDG++   + A +++++
Sbjct: 377 EILDLKSVLDGNIGPLLGAHISMRR 401


>gi|213580224|ref|ZP_03362050.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 209

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 128/207 (61%), Positives = 153/207 (73%)

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ A
Sbjct: 3   QGLDDVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQA 62

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTE+QDWA+MLLRMY RWAE R FKTE +E  +GE AGIKSAT+ I G  AYGWL+ 
Sbjct: 63  GSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLRT 122

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHV
Sbjct: 123 ETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHV 182

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQH 270
           N T+SAVRITHIPTG+V QCQ +RSQH
Sbjct: 183 NRTESAVRITHIPTGIVTQCQNDRSQH 209


>gi|156094764|ref|XP_001613418.1| peptide chain release factor [Plasmodium vivax SaI-1]
 gi|148802292|gb|EDL43691.1| peptide chain release factor, putative [Plasmodium vivax]
          Length = 334

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 85/275 (30%), Positives = 132/275 (48%), Gaps = 34/275 (12%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIH---DGEEAGI 165
             +   N   L + +G GGTE+ D+ +ML  MY ++  K K K             E GI
Sbjct: 57  YSKYFKNSCSLILSSGTGGTEACDFCSMLYNMYMKYLSKLKNKKNIKYEVIDLSKNEVGI 116

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS- 224
           K   + I G  ++     E+G+HR+VR SP+++ +++ TSF  + V P +  +    I+ 
Sbjct: 117 KKVEIKIDGEYSFYNFVSEKGIHRMVRNSPFNAQNKKMTSFVKVDVIPTLSYNDTNVINF 176

Query: 225 ----------------------------ESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
                                       +SD  I T R+ G GGQ+VN  ++AVRI H P
Sbjct: 177 LNIAESSSPSVKKNMNSRNINVNEIALNKSDLVIQTMRSGGKGGQNVNKVETAVRILHKP 236

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316
           T + V+   ERSQ  NK  A   +  KL  L+L+   +      S+K+   +G QIR+Y+
Sbjct: 237 TNISVKVSSERSQILNKRIALKTIYEKLLYLQLE-ALKNKKYEFSNKSLTHFGEQIRNYI 295

Query: 317 LQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKAT 350
           L   +M+KD RTN+  T    VL  G+++ F+ A 
Sbjct: 296 LYGNKMIKDTRTNVSSTDVDRVLSQGEIELFVDAY 330


>gi|281414235|ref|ZP_06245977.1| peptide chain release factor 2 [Micrococcus luteus NCTC 2665]
          Length = 129

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 53/120 (44%), Positives = 74/120 (61%), Gaps = 1/120 (0%)

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +SG   Q V    SAVR+TH+PTG+VV  Q E+SQ +N+A A  +L+++L  L   + + 
Sbjct: 1   SSGPASQSVGAPHSAVRMTHLPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLLRKAEEDA 60

Query: 295 IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                     +  WG Q+RSYVL PYQMVKDLRT  E+ +PS V DG +DDF+ A +  +
Sbjct: 61  KKKEMAGD-VKASWGDQMRSYVLNPYQMVKDLRTGHEEGNPSSVFDGHIDDFVDAGIRWR 119


>gi|22135990|gb|AAM91577.1| putative protein [Arabidopsis thaliana]
 gi|30725574|gb|AAP37809.1| At3g57190 [Arabidopsis thaliana]
          Length = 372

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 79/325 (24%), Positives = 155/325 (47%), Gaps = 13/325 (4%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
            LW +  ++  ++ +      A+  +K+++ +  +  ++++L   +     L E + +  
Sbjct: 53  DLWDDPAKSDEILLKLADRAKAVDSLKDLKYKAEEAKLIIQLGEMDAIDYSLFEQAYDSS 112

Query: 94  RIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKT 152
                   + +   LL  + D+  A + + +G+ G +SQ W   ++ MY +WAE+     
Sbjct: 113 LDVSRSLHHYEMSKLLRDQYDAEGACMIIKSGSPGAKSQIWTEQVVSMYIKWAERLGQNA 172

Query: 153 EALEIHD--GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIW 210
              E       ++G+ SAT+  +   AYG+L GE+GVHRL+      S S    S +   
Sbjct: 173 RVAEKCSLLSNKSGVSSATIEFEFEFAYGYLLGERGVHRLI----ISSTSNEECSATVDI 228

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           +   +  S + E+ E D  +     S    +     ++ V I HIP+GV +Q   ER++ 
Sbjct: 229 IPLFLRASPDFEVKEGDLIV-----SYPAKEDHKIAENMVCIHHIPSGVTLQSSGERNRF 283

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
            N+ +A N L+AKL  +  +++    N    SK  +    + RSYV + ++MV D +T +
Sbjct: 284 ANRIKALNRLKAKLLVIAKEQKVSDVNKI-DSKNILEPREETRSYVSKGHKMVVDRKTGL 342

Query: 331 EKTSPSDVLDGDLDDFMKATLAIKK 355
           E      VLDG++   + A +++++
Sbjct: 343 EILDLKSVLDGNIGPLLGAHISMRR 367


>gi|322499707|emb|CBZ34781.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 439

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 75/304 (24%), Positives = 143/304 (47%), Gaps = 11/304 (3%)

Query: 42  AKMLMRERQHLDNAISFIKEIQDR-LCDNLILLELALEEDDCSILQETSDNLQRIKLEVE 100
           A+ +    + LD  ++   ++Q + +          + ++D + L +    L+     V 
Sbjct: 105 AEKVCAVLRQLDENVTLHDQLQSKSVRSREDEEIFDMAKEDIATLTDQLRVLEGEVNAVM 164

Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW-AEKRKFKTEALEIHD 159
            ++  S     + +N   + V   AGG E+  +A  L  MY  +  E R +K   +   D
Sbjct: 165 ERRIGSDDLVGSVTNVWNINVEGKAGGEEASLFAAELAEMYRMYATEFRNWKVRPVVKDD 224

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
           G EA   S    + G   Y  ++ E GVH++ R+   D+  +  TS +   + P V D +
Sbjct: 225 GSEA-ANSNEFQVCGEGVYRNMRHEIGVHKVQRVPVTDAAGKMQTSTAVFTMMP-VLDPV 282

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
            +++ ESDC+ID  R SG GGQ + ++ + V +TH P+G+ V+C Q RS   NK  A   
Sbjct: 283 SVDVHESDCKIDFVRGSGPGGQGMQSSSNCVVLTHKPSGISVKCHQSRSALGNKELALQT 342

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPS 336
           +  ++  L  + +E+ +++ ++ + +   G +   +R+Y   P   V D R   +  + S
Sbjct: 343 VAQQI--LVQRVKEQNSSLHKAWQNQWSSGERSDKMRTYNY-PQNRVTDHRIG-KDYALS 398

Query: 337 DVLD 340
             ++
Sbjct: 399 SFME 402


>gi|146088922|ref|XP_001466182.1| peptide chain release factor-like protein [Leishmania infantum
           JPCM5]
 gi|134070284|emb|CAM68621.1| peptide chain release factor-like protein [Leishmania infantum
           JPCM5]
          Length = 439

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 75/304 (24%), Positives = 143/304 (47%), Gaps = 11/304 (3%)

Query: 42  AKMLMRERQHLDNAISFIKEIQDR-LCDNLILLELALEEDDCSILQETSDNLQRIKLEVE 100
           A+ +    + LD  ++   ++Q + +          + ++D + L +    L+     V 
Sbjct: 105 AEKVCAVLRQLDENVTLHDQLQSKSVRSREDEEIFDMAKEDIATLTDQLRVLEGEVNAVM 164

Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW-AEKRKFKTEALEIHD 159
            ++  S     + +N   + V   AGG E+  +A  L  MY  +  E R +K   +   D
Sbjct: 165 ERRIGSDDLVGSVTNVWNINVEGKAGGEEASLFAAELAEMYRMYATEFRNWKVRPVVKDD 224

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
           G EA   S    + G   Y  ++ E GVH++ R+   D+  +  TS +   + P V D +
Sbjct: 225 GSEA-ANSNEFQVCGEGVYRNMRHEIGVHKVQRVPVTDAAGKMQTSTAVFTMMP-VLDPV 282

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
            +++ ESDC+ID  R SG GGQ + ++ + V +TH P+G+ V+C Q RS   NK  A   
Sbjct: 283 SVDVHESDCKIDFVRGSGPGGQGMQSSSNCVVLTHKPSGISVKCHQSRSALGNKELALQT 342

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPS 336
           +  ++  L  + +E+ +++ ++ + +   G +   +R+Y   P   V D R   +  + S
Sbjct: 343 VAQQI--LVQRVKEQNSSLHKAWQNQWSSGERSDKMRTYNY-PQNRVTDHRIG-KDYALS 398

Query: 337 DVLD 340
             ++
Sbjct: 399 SFME 402


>gi|307176123|gb|EFN65821.1| Peptide chain release factor 1-like, mitochondrial [Camponotus
           floridanus]
          Length = 412

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 94/335 (28%), Positives = 162/335 (48%), Gaps = 22/335 (6%)

Query: 16  WDNAVQRL-----SFLNTKTEDPHLWQ--NVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            ++ ++R           +    + ++  ++     L+ +R HL   +  I+ +QD    
Sbjct: 58  LEDKIRRYLDYVTKEYKNEASKSNFFEFIDLKTVGHLLDDRTHL---VENIQNLQDLAKQ 114

Query: 69  NLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           ++ + +LA EE+     Q    + + +   +     E         +   +E+ AG GG 
Sbjct: 115 DVEMKKLAKEEETLYKEQLNELDERLLDNILINICKE-------SYDSIIIEITAGVGGQ 167

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
           E+  +   L  MY  +A+      E +++   +  GI+  ++L+ G   Y  L+ E GVH
Sbjct: 168 EAMLFVKDLYEMYMGYAKYLDLTHEVIDMETNDNNGIRHVSILLSGDETYK-LQYEGGVH 226

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           R+ RI   + + R HTS +S+ + P     ++I I++ D +I+T RASGAGGQHVNTTDS
Sbjct: 227 RVQRIPATERSGRVHTSTASVAILP-TPSKVQIVINDKDLKIETKRASGAGGQHVNTTDS 285

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI-G 307
           AVRI ++P+G+ V CQ  RSQ KNK  A   LR+ LYE +L K+    +     +  +  
Sbjct: 286 AVRIIYLPSGLSVSCQMHRSQIKNKEVAMIKLRSILYEQQLNKQTTFISELRQKQMGMKS 345

Query: 308 WGRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDG 341
              ++R+Y       V D R  N    +  + + G
Sbjct: 346 RNEKVRTYNYN-QDRVTDHRLQNGTMYNLPEFMQG 379


>gi|157870704|ref|XP_001683902.1| peptide chain release factor-like protein [Leishmania major]
 gi|68126969|emb|CAJ05291.1| peptide chain release factor-like protein [Leishmania major strain
           Friedlin]
          Length = 439

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 77/304 (25%), Positives = 143/304 (47%), Gaps = 11/304 (3%)

Query: 42  AKMLMRERQHLDNAISFIKEIQDR-LCDNLILLELALEEDDCSILQETSDNLQRIKLEVE 100
           A  +    + LD   +   ++Q + L +      L + ++D + L      L+     V 
Sbjct: 105 AAKVCAVLRQLDENATLHDQLQSKSLRNREDEEILDMVKEDIATLMNQLRLLEGEVNAVM 164

Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW-AEKRKFKTEALEIHD 159
            ++  S     + +N   + V   AGG E+  +A  L  MY  +  E R +K   +   D
Sbjct: 165 ERRIGSDDLVGSVTNVWNINVEGKAGGEEASLFAAELAEMYRMYATEFRNWKVRPVVKDD 224

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
           G EA   S    + G   Y  ++ E GVH++ R+   D+  +  TS +   + P V D +
Sbjct: 225 GSEA-ANSNEFQVCGEGVYRNMRHEIGVHKVQRVPVTDAAGKMQTSTAVFTMMP-VLDPV 282

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
            +++ E+DC+ID  R SG GGQ + ++ + V +TH P+G+ V+C Q RS   NK  A  M
Sbjct: 283 SVDVHENDCKIDFVRGSGPGGQGMQSSSNCVVLTHKPSGISVKCHQSRSALGNKELALQM 342

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPS 336
           +  ++  L  + +E+ +++ ++ + +   G +   +R+Y   P   V D R   +  + S
Sbjct: 343 VAQQI--LAQRVKEQNSSLHKAWQNQWSSGERSDKMRTYN-HPQNRVTDHRLG-KDYALS 398

Query: 337 DVLD 340
             ++
Sbjct: 399 SFME 402


>gi|169607138|ref|XP_001796989.1| hypothetical protein SNOG_06624 [Phaeosphaeria nodorum SN15]
 gi|160707160|gb|EAT86455.2| hypothetical protein SNOG_06624 [Phaeosphaeria nodorum SN15]
          Length = 294

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 76/252 (30%), Positives = 115/252 (45%), Gaps = 28/252 (11%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           +           LE+  GAGG+E+  +A  L RMY  +  +  F+T  L+          
Sbjct: 49  VPVHPFAHLPCILEIRPGAGGSEAAIFAGDLFRMYQTFCNRSGFRTSLLKYE------NV 102

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           + T     P +    + E      V  S  D                  +   +  I + 
Sbjct: 103 NGTTEAGVPLSEAIFEIENADAYGVFRSQED----------------FENPESDYYIDQK 146

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           + +++  RASGAGGQHVN T+SAVR+THIPT  VV  Q  RSQHKNK  AW+++R+++ +
Sbjct: 147 EIKLEVMRASGAGGQHVNKTESAVRLTHIPTNTVVSMQDSRSQHKNKESAWSLMRSRIAQ 206

Query: 287 LELQKREEIANIGESS---KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD- 342
           L  +KREE       S     ++G G ++R+Y     Q V D R+ I      DV+ G  
Sbjct: 207 LRREKREEEMVNLRRSVVGVAKMGRGDKVRTYNWG-QQRVTDHRSGITVHDLDDVMGGGQ 265

Query: 343 -LDDFMKATLAI 353
            L+  M++    
Sbjct: 266 TLEKVMESVRGW 277


>gi|221051906|ref|XP_002257529.1| peptidyl-trna hydrolase [Plasmodium knowlesi strain H]
 gi|193807359|emb|CAQ37864.1| peptidyl-trna hydrolase, putative [Plasmodium knowlesi strain H]
          Length = 334

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 84/275 (30%), Positives = 132/275 (48%), Gaps = 34/275 (12%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG---EEAGI 165
             +   N   L + +G GGTE+ D+ +ML  MY ++  K K K             E GI
Sbjct: 57  YSKYFKNSCSLILSSGTGGTEACDFCSMLYNMYMKYLSKLKNKKNIKYEVMDLSKNEVGI 116

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI---- 221
           K   + I G  ++     E+G+HR+VR SP+++ +++ TSF  + V P +  +       
Sbjct: 117 KKVEIKIDGEYSFYNFVSEKGIHRMVRNSPFNAQNKKMTSFVKVDVIPTLSYNDTNVINF 176

Query: 222 -------------------------EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
                                     +++SD  I T R+ G GGQ+VN  ++AVRI H P
Sbjct: 177 LNIAESSSTPVKKTLNSRNINVNEIPLNKSDLVIQTMRSGGKGGQNVNKVETAVRILHKP 236

Query: 257 TGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYV 316
           T + V+   ERSQ  NK  A   +  KL  L+L+   +      S+K+   +G QIR+Y+
Sbjct: 237 TNISVKVSSERSQILNKRIALKTIYEKLLYLQLE-ALKNKKYEFSNKSLTHFGEQIRNYI 295

Query: 317 LQPYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKAT 350
           L   +M+KD RTN+  T    VL  G+++ F+ A 
Sbjct: 296 LYGNKMIKDTRTNVFSTDVDRVLSQGEIELFVDAY 330


>gi|238506130|ref|XP_002384267.1| mitochondrial translation release factor (RF-1), putative
           [Aspergillus flavus NRRL3357]
 gi|220690381|gb|EED46731.1| mitochondrial translation release factor (RF-1), putative
           [Aspergillus flavus NRRL3357]
          Length = 267

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 70/205 (34%), Positives = 105/205 (51%), Gaps = 21/205 (10%)

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP------------ 213
             A + ++   AY  L+ E GVHR+ R+   ++  R HTS  S+ V P            
Sbjct: 30  NEAVMEVEADGAYEILRTESGVHRVQRVPATETKGRTHTSAVSVMVLPSFPETGGAMDNA 89

Query: 214 --VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHK 271
               D + +  +   + R +  RA GAGGQHVN T+SA+R+TH+PTG+VV  Q  RSQH 
Sbjct: 90  LNFDDPNSDYYVDPQEVRSEKMRAGGAGGQHVNKTESAIRLTHMPTGIVVSMQDSRSQHA 149

Query: 272 NKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           N+ +AW +LRA+L E   + RE+               +G G +IR+Y         D R
Sbjct: 150 NRKKAWQILRARLAEARQEAREQKFVELRRGVLGGVARMGRGDKIRTYNYG-QSRCTDHR 208

Query: 328 TNIEKTSPSDVLDG--DLDDFMKAT 350
           ++I   + +DVLDG   L+  M++ 
Sbjct: 209 SSITIHNLNDVLDGGEGLETVMESF 233


>gi|322492443|emb|CBZ27717.1| peptide chain release factor-like protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 439

 Score =  116 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 78/304 (25%), Positives = 144/304 (47%), Gaps = 11/304 (3%)

Query: 42  AKMLMRERQHLDNAISFIKEIQDR-LCDNLILLELALEEDDCSILQETSDNLQRIKLEVE 100
           A+ +    + LD  ++   ++Q + +        L + ++D + L E    L+     V 
Sbjct: 105 AEKVCVVLRQLDENVTLHDQLQSKSVRSREDEEILDMLKEDIATLTEQLRLLEGEVNAVM 164

Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW-AEKRKFKTEALEIHD 159
            ++  S     + +N   + V   AGG E+  +A  L  MY  +  E R +K   +   D
Sbjct: 165 ERRIGSDDLVGSVTNVWNINVEGKAGGEEASLFAAELAEMYRTYATEFRNWKVRPVVKDD 224

Query: 160 GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
           G EA   S    + G   Y  +  E GVH++ R+   D+  +  TS +   + P V D +
Sbjct: 225 GSEA-ASSNEFQVSGEGVYRNMHHEIGVHKVQRVPVTDAAGKMQTSTAVFTMMP-VLDPV 282

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
            +++ ESDC+ID  R SG GGQ + ++ + V +TH P+G+ V+C Q RS   NK  A  M
Sbjct: 283 SVDVHESDCKIDFVRGSGPGGQGMQSSSNCVVLTHKPSGISVKCHQSRSALGNKELALQM 342

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPS 336
           +  ++  L  + +E+ +++ ++ + +   G +   +R+Y   P   V D R   +  + S
Sbjct: 343 VAQQI--LAQRVKEQNSSLHKAWQNQWSSGERSDKMRTYNY-PQNRVTDHRIG-KDYALS 398

Query: 337 DVLD 340
             ++
Sbjct: 399 SFME 402


>gi|73667063|ref|YP_303079.1| class I peptide chain release factor domain-containing protein
           [Ehrlichia canis str. Jake]
 gi|72394204|gb|AAZ68481.1| Class I peptide chain release factor domain [Ehrlichia canis str.
           Jake]
          Length = 173

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 73/162 (45%), Positives = 105/162 (64%), Gaps = 9/162 (5%)

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
           +K E GVHR+ R+   +++ R +TS +++ V P   + ++++I E D RID YR+SG GG
Sbjct: 1   MKFESGVHRVQRVPETEASGRLYTSAATVAVLP-EIEEVDLKIDEKDLRIDVYRSSGPGG 59

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           Q VNTTDSAVRITHIP+G+VV  + E+SQHKNK  A  +LRA+LY LE QKR+    I +
Sbjct: 60  QSVNTTDSAVRITHIPSGIVVIQRDEKSQHKNK--ALKVLRARLYNLEKQKRDSE--ISQ 115

Query: 301 SSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
             K++IG G    +IR+Y   P   + D R N+      D++
Sbjct: 116 MRKSQIGSGDRSERIRTYNF-PQSRITDHRINLTLYRLEDIM 156


>gi|301346253|ref|ZP_07226994.1| peptide chain release factor 2 [Acinetobacter baumannii AB056]
 gi|301513591|ref|ZP_07238828.1| peptide chain release factor 2 [Acinetobacter baumannii AB058]
 gi|301596660|ref|ZP_07241668.1| peptide chain release factor 2 [Acinetobacter baumannii AB059]
          Length = 201

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 103/199 (51%), Positives = 143/199 (71%)

Query: 47  RERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES 106
           +E+  L+N I+ +  +  +L D   +L+LA+E DD S+L++    L   + E+   +F  
Sbjct: 3   KEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELSTAEEELAKLEFRR 62

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           + S   D N  Y+E+ AG+GGTE+QDWA+MLLRMY RW E+  FK E +E+ DG+ AGIK
Sbjct: 63  MFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAGIK 122

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SAT+ ++G  AYGWL+ E GVHRLVR SP+DS +RRHTSFS++++ P VDD+IEI+I+ S
Sbjct: 123 SATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDINPS 182

Query: 227 DCRIDTYRASGAGGQHVNT 245
           D R DTYRASGAGGQH+N 
Sbjct: 183 DVRTDTYRASGAGGQHINK 201


>gi|322801718|gb|EFZ22324.1| hypothetical protein SINV_03599 [Solenopsis invicta]
          Length = 300

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 81/231 (35%), Positives = 126/231 (54%), Gaps = 6/231 (2%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
            +   +E+ AG GG E+  +   L  MY  +A+      E +++   +  GI+  +++I 
Sbjct: 41  YDSIIIEITAGVGGQEAMLFVKDLYDMYLGYAKYLDLDHEIIDMEVTDNKGIRHVSVIIS 100

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G       + E GVHR+ R+   +  SR HTS +S+ + P V   I+I I+E D +I+T 
Sbjct: 101 GNQVDK-FQHEGGVHRVQRVPATERLSRVHTSTASVAILP-VPSEIQIMINEKDLKIETK 158

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R+SGAGGQHVNTTDSAVRITH+P+GV V C+  RSQ KN+  A + L++ LYE +L K+ 
Sbjct: 159 RSSGAGGQHVNTTDSAVRITHLPSGVSVTCEVHRSQDKNRKMAMDKLKSVLYERQLNKQT 218

Query: 294 EIANIGESSKTEIG-WGRQIRSYVLQPYQMVKDLRTNI--EKTSPSDVLDG 341
              +     +  +G    +IR+Y       V D R        + ++ + G
Sbjct: 219 SFTSELRQKQMGMGFRNEKIRTYNYN-QDRVTDHRLGQNGTLYNLAEFMQG 268


>gi|167948500|ref|ZP_02535574.1| peptide chain release factor 2 (programmed frameshift) [Endoriftia
           persephone 'Hot96_1+Hot96_2']
          Length = 105

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 60/102 (58%), Positives = 74/102 (72%), Gaps = 1/102 (0%)

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH PTG+VVQCQ +RSQHKNK QA   L+AKLYELE+QK+ E     E +K++IGW  
Sbjct: 2   RITHNPTGIVVQCQNDRSQHKNKDQAMKQLKAKLYELEIQKQRETQQAVEDTKSDIGWDS 61

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           QIRSYVL     +KDLRTN+E  +   VLDG LD F++A+L 
Sbjct: 62  QIRSYVLD-ASRIKDLRTNVETGNTQAVLDGGLDIFIEASLK 102


>gi|88607753|ref|YP_505069.1| peptide chain release factor 2, truncation [Anaplasma
           phagocytophilum HZ]
 gi|88598816|gb|ABD44286.1| peptide chain release factor 2, truncated [Anaplasma
           phagocytophilum HZ]
          Length = 226

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 105/216 (48%), Positives = 142/216 (65%), Gaps = 1/216 (0%)

Query: 37  QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK 96
            +  +AK L+ ER  +   ++  + ++    D   L E+  + DD   L   +  LQ +K
Sbjct: 3   DDAEKAKSLLSERSRVSAVLTSFRVLEKEHKDLAELAEMISDSDDRDFLATINAELQSLK 62

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE-KRKFKTEAL 155
           L +  K+ E + S EAD+N  +L + +GAGGTES DW  MLLRMYT+WAE   +F  E +
Sbjct: 63  LRISQKKTECMFSHEADANSCFLTIRSGAGGTESSDWVCMLLRMYTKWAESFHEFTVETV 122

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           +  DGEE G+K+ T+ I G  AYGW + E G+HRLVRISP+D  ++RHTSF+S+ V PVV
Sbjct: 123 DSVDGEETGLKAVTVKICGIGAYGWARTESGIHRLVRISPFDHAAKRHTSFASVEVSPVV 182

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           D  I+I+I E D RIDTYRASGAGGQHVN T+SAVR
Sbjct: 183 DHEIDIKILEKDLRIDTYRASGAGGQHVNKTESAVR 218


>gi|6735298|emb|CAB68125.1| putative protein [Arabidopsis thaliana]
          Length = 409

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 80/328 (24%), Positives = 156/328 (47%), Gaps = 16/328 (4%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
            LW +  ++  ++ +      A+  +K+++ +  +  ++++L   +     L E + +  
Sbjct: 87  DLWDDPAKSDEILLKLADRAKAVDSLKDLKYKAEEAKLIIQLGEMDAIDYSLFEQAYDSS 146

Query: 94  RIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGGTESQD---WANMLLRMYTRWAEKRK 149
                   + +   LL  + D+  A + + +G+ G +SQD   W   ++ MY +WAE+  
Sbjct: 147 LDVSRSLHHYEMSKLLRDQYDAEGACMIIKSGSPGAKSQDLQIWTEQVVSMYIKWAERLG 206

Query: 150 FKTEALEIHD--GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
                 E       ++G+ SAT+  +   AYG+L GE+GVHRL+      S S    S +
Sbjct: 207 QNARVAEKCSLLSNKSGVSSATIEFEFEFAYGYLLGERGVHRLI----ISSTSNEECSAT 262

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
              +   +  S + E+ E D  +     S    +     ++ V I HIP+GV +Q   ER
Sbjct: 263 VDIIPLFLRASPDFEVKEGDLIV-----SYPAKEDHKIAENMVCIHHIPSGVTLQSSGER 317

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           ++  N+ +A N L+AKL  +  +++    N    SK  +    + RSYV + ++MV D +
Sbjct: 318 NRFANRIKALNRLKAKLLVIAKEQKVSDVNKI-DSKNILEPREETRSYVSKGHKMVVDRK 376

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           T +E      VLDG++   + A +++++
Sbjct: 377 TGLEILDLKSVLDGNIGPLLGAHISMRR 404


>gi|82540115|ref|XP_724399.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
 gi|23479026|gb|EAA15964.1| Peptidyl-tRNA hydrolase domain, putative [Plasmodium yoelii yoelii]
          Length = 330

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 87/275 (31%), Positives = 135/275 (49%), Gaps = 32/275 (11%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI---HDGEEAGI 165
             +   N   L + +G GGTE+ D+ NML  MY ++  K K K             E GI
Sbjct: 55  YSKYFKNSCSLILSSGTGGTEACDFCNMLYNMYMKYLGKIKNKKNIKYEVIDISKNEIGI 114

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS- 224
           K   + + G  ++  L  E+G+HRLVR SP++S +++ TSF  + V P +  +    ++ 
Sbjct: 115 KKVEIKVDGEYSFYNLISEKGIHRLVRNSPFNSQNKKMTSFVKVDVIPSLSYNDTNIVNF 174

Query: 225 --------------------------ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
                                     +SD  I T R+ G GGQ+VN  ++AVRI H PT 
Sbjct: 175 LNINENDNISLKKNNNMRNMNEMLVNKSDLVIQTMRSGGKGGQNVNKVETAVRIIHKPTN 234

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           + V+   ERSQ  NK  A  M+  KL  L+++   +      S+K+   +G QIR+Y+L 
Sbjct: 235 ISVKVSSERSQILNKRIALKMIYEKLLYLQIE-ALKNVKYELSNKSLTHFGEQIRNYILY 293

Query: 319 PYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
             +M+KD RTN+  T    +L  G++D F++A   
Sbjct: 294 GNKMIKDTRTNVFSTEIDKILSQGEIDIFVEAYQK 328


>gi|1149684|emb|CAA60204.1| prfA [Clostridium perfringens]
          Length = 136

 Score =  112 bits (281), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 62/128 (48%), Positives = 84/128 (65%), Gaps = 6/128 (4%)

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           D +EIEI++ D +ID +RASG GGQ VNTTDSAVRITH+P+G+VV CQ E+SQ KNK +A
Sbjct: 11  DDVEIEINDKDIKIDVFRASGNGGQCVNTTDSAVRITHLPSGLVVSCQDEKSQLKNKEKA 70

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
             +LRA+L+  E  + E +A I E  K+++G G    +IR+Y   P   V D R N+   
Sbjct: 71  MKVLRARLF--EQAEAERLAGIAEDRKSQVGTGDRSERIRTYNY-PQGRVTDHRINMTLY 127

Query: 334 SPSDVLDG 341
                L+G
Sbjct: 128 KLDSFLEG 135


>gi|261326766|emb|CBH09739.1| peptide chain release factor 1, putative [Trypanosoma brucei
           gambiense DAL972]
          Length = 459

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 79/303 (26%), Positives = 138/303 (45%), Gaps = 22/303 (7%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            L + +   + + D   D      L + E+D   L E   ++      V  ++     + 
Sbjct: 131 KLKDQLHSHETLSDDDRDI-----LLMVEEDVRELVEKVRDMDSDVNAVMTRRLNLSDAL 185

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW-AEKRKFKTEAL----EIHDGEEAG- 164
            + +N   LEV   AGG E+  +A+ LL MY  +  E R +  +      +       G 
Sbjct: 186 GSCTNTWSLEVAGKAGGEEASLFASELLEMYRAYATEIRHWSVDVDGGEGDGEPVSSGGP 245

Query: 165 ---IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
                   + +KG   Y  L+ E GVH++ R+   D + +  TS + + + P V D + +
Sbjct: 246 AVGGNGMKIKVKGEGVYRNLRHEIGVHKVQRVPVTDQDGKMQTSTAVVTLMP-VLDPVSV 304

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           ++ E DC I+  R SG GGQ + ++ +AV +TH P+G+ V+C Q RS   NK  A  M+ 
Sbjct: 305 DVHERDCNIEFVRGSGPGGQGMQSSSNAVCLTHKPSGISVKCHQSRSALGNKELALQMVA 364

Query: 282 AKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDV 338
            +L  L  + +++ +++ E+   +   G +   +R+Y   P   V D R   +  S    
Sbjct: 365 QQL--LVRRVKDQNSSLHETWCNQWSSGERSDKMRTYNY-PQNRVTDHRLGRD-YSLGTF 420

Query: 339 LDG 341
           LDG
Sbjct: 421 LDG 423


>gi|72386553|ref|XP_843701.1| peptide chain release factor 1 [Trypanosoma brucei TREU927]
 gi|62175752|gb|AAX69880.1| peptide chain release factor 1, putative [Trypanosoma brucei]
 gi|70800233|gb|AAZ10142.1| peptide chain release factor 1, putative [Trypanosoma brucei brucei
           strain 927/4 GUTat10.1]
          Length = 459

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 79/303 (26%), Positives = 138/303 (45%), Gaps = 22/303 (7%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            L + +   + + D   D      L + E+D   L E   ++      V  ++     + 
Sbjct: 131 KLKDQLHSHETLSDDDRDI-----LLMVEEDVRELVEKVRDMDSDVNAVMTRRLNLSDAL 185

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRW-AEKRKFKTEAL----EIHDGEEAG- 164
            + +N   LEV   AGG E+  +A+ LL MY  +  E R +  +      +       G 
Sbjct: 186 GSCTNTWSLEVAGKAGGEEASLFASELLEMYRAYATEIRHWSVDVDGGEGDGEPVSSGGP 245

Query: 165 ---IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
                   + +KG   Y  L+ E GVH++ R+   D + +  TS + + + P V D + +
Sbjct: 246 AVGGNGMKIKVKGEGVYRNLRHEIGVHKVQRVPVTDQDGKMQTSTAVVTLMP-VLDPVSV 304

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           ++ E DC I+  R SG GGQ + ++ +AV +TH P+G+ V+C Q RS   NK  A  M+ 
Sbjct: 305 DVHEKDCNIEFVRGSGPGGQGMQSSSNAVCLTHKPSGISVKCHQSRSALGNKELALQMVA 364

Query: 282 AKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDV 338
            +L  L  + +++ +++ E+   +   G +   +R+Y   P   V D R   +  S    
Sbjct: 365 QQL--LVRRVKDQNSSLHETWCNQWSSGERSDKMRTYNY-PQNRVTDHRLGRD-YSLGTF 420

Query: 339 LDG 341
           LDG
Sbjct: 421 LDG 423


>gi|297817036|ref|XP_002876401.1| hypothetical protein ARALYDRAFT_324229 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322239|gb|EFH52660.1| hypothetical protein ARALYDRAFT_324229 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 409

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 77/328 (23%), Positives = 153/328 (46%), Gaps = 16/328 (4%)

Query: 34  HLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQ 93
            LW +  ++  ++ +       +  +K+++ +  +  ++++L   +     L E + +  
Sbjct: 87  DLWDDPAKSDEILLKLADRAKTVDSLKDLKYKAEEAKLIIQLGEMDAIDYSLFEQAYDSS 146

Query: 94  RIKLEV-EYKQFESLLSGEADSNDAYLEVHAGAGGTESQD---WANMLLRMYTRWAEKRK 149
                   + +   LL+ + D+  A + + +G+   +SQD   W   ++ MY +WAEK  
Sbjct: 147 LDVSRSLHHYEMSKLLTDQYDAEGACMIIKSGSQDAKSQDLQIWTEQVVSMYIKWAEKLG 206

Query: 150 FKTEALEIHD--GEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
                 E       ++G+ SAT+  +   AYG+L GE+GVHRL+      S S    S +
Sbjct: 207 QNARVAEKCSFLSNKSGVNSATIEFEFDFAYGYLLGERGVHRLI----ISSTSSEECSAT 262

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
              +   +  S + E+ E D  +     S    ++    ++ V I HIP+G+ V+   ER
Sbjct: 263 VDIIPLFLRASPDFEVKEDDLIV-----SYPAKENHKIAENMVSIQHIPSGITVESSGER 317

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLR 327
           ++  N+ +A N L+AKL  +  +++    N   S      W  + R YV +  +MV D +
Sbjct: 318 NRFANRIKALNRLKAKLLVIAKEQKISDVNKINSKNILKPW-EETRRYVSKGQKMVVDTK 376

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           T +E      VLDG++   + A +++++
Sbjct: 377 TGLEILDLKSVLDGNIGPLLGAHISMRR 404


>gi|56808306|ref|ZP_00366070.1| COG1186: Protein chain release factor B [Streptococcus pyogenes M49
           591]
          Length = 214

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 90/216 (41%), Positives = 132/216 (61%), Gaps = 2/216 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             + ++ L     +P    + I A+   +E   L         +Q+   +  +LLE+  E
Sbjct: 1   MEEEIALLENHMTEPDFXNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDE 60

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           +D   + +E  +NL ++   +   +   LLS   D N+A LE+H G+GGTE+QDW ++LL
Sbjct: 61  DDS--LKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLL 118

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           RMYTR+     FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLVRISP+DS
Sbjct: 119 RMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDS 178

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             RRHTSF+S+ V P +DD+IE+E+ + D ++DT++
Sbjct: 179 AKRRHTSFASVEVMPELDDTIEVEVRDDDIKMDTFQ 214


>gi|296775660|gb|ADH42937.1| protein chain release factor A [uncultured SAR11 cluster alpha
           proteobacterium H17925_23J24]
          Length = 181

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 64/154 (41%), Positives = 94/154 (61%), Gaps = 6/154 (3%)

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
            + ++        + ++I+I++SD RID +R+SG GGQ VNTTDSAVRITH P+G+VV  
Sbjct: 21  HTSAATVAILPEAEDVDIKINDSDLRIDVFRSSGPGGQSVNTTDSAVRITHGPSGIVVTQ 80

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPY 320
           Q E+SQHKNKA+A  +LRA+LY  E +K ++        K++IG G    +IR+Y   P 
Sbjct: 81  QDEKSQHKNKAKALKILRARLY--ESEKLKKERQRSSERKSQIGTGDRSERIRTYNF-PQ 137

Query: 321 QMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             V D R N      +D L+G++ + M   L +K
Sbjct: 138 GRVTDHRINFTLHKLTDFLNGEIHEEMNENLRLK 171


>gi|163803384|ref|ZP_02197260.1| putative peptide chain release factor 2 [Vibrio sp. AND4]
 gi|159172846|gb|EDP57688.1| putative peptide chain release factor 2 [Vibrio sp. AND4]
          Length = 193

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 91/192 (47%), Positives = 131/192 (68%)

Query: 36  WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRI 95
           W     A+ L +ER  L+  +  I +++  + D   LLELA+EE+D     E    L  +
Sbjct: 2   WNEPERAQALGKERASLEAIVETIVQLEQGVEDVEGLLELAVEEEDQETFDEIEPELAEL 61

Query: 96  KLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           + ++E  +F  + SG+ DS+D Y+++ AG+GGTE+QDW NM+LRMY RWAE + FK+E +
Sbjct: 62  EGKLEKLEFRRMFSGDHDSSDCYIDLQAGSGGTEAQDWTNMMLRMYLRWAEAKGFKSEVI 121

Query: 156 EIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVV 215
           E+ +GE AG+K AT+ I G  AYGWL+ E GVHRLVR SP+DS  RRHTSF+S ++YP +
Sbjct: 122 EVSEGEVAGLKGATVKISGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFASAFIYPEI 181

Query: 216 DDSIEIEISESD 227
           DD+I I+I+ SD
Sbjct: 182 DDNINIDINPSD 193


>gi|68072219|ref|XP_678023.1| peptide chain release factor [Plasmodium berghei strain ANKA]
 gi|56498354|emb|CAH99275.1| peptide chain release factor, putative [Plasmodium berghei]
          Length = 329

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 85/275 (30%), Positives = 131/275 (47%), Gaps = 33/275 (12%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI---HDGEEAGI 165
             +   N   L + +G GGTE+ D+ NML  MY ++  K K K             E GI
Sbjct: 55  YSKYFKNSCSLILSSGTGGTEACDFCNMLYNMYMKYLGKIKNKKYIKYEVIDISKNEIGI 114

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS- 224
           K   + + G  ++  L  E+G+HRLVR SP++S +++ TSF  + V P +  +    ++ 
Sbjct: 115 KKVEIKVDGEYSFYNLISEKGIHRLVRNSPFNSQNKKMTSFVKVDVIPSLSYNDTNIVNF 174

Query: 225 --------------------------ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
                                     +SD  I T R+ G GGQ+VN  ++AVRI H PT 
Sbjct: 175 LNINENDNISLKKNNNMRNMNEMLVNKSDLVIQTMRSGGKGGQNVNKVETAVRIIHKPTN 234

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           + V+   ERSQ  NK  A  M+   LY      +     +   +K+   +G QIR+Y+L 
Sbjct: 235 ISVKVSSERSQILNKRIALKMIEKLLYLQIEALKNVKYELS--NKSLTHFGEQIRNYILY 292

Query: 319 PYQMVKDLRTNIEKTSPSDVL-DGDLDDFMKATLA 352
             +M+KD RTN+  T    +L  G++D F++A   
Sbjct: 293 GNKMIKDTRTNVFSTEIDKILSQGEIDIFVEAYQK 327


>gi|154338826|ref|XP_001565635.1| peptide chain release factor-like protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134062687|emb|CAM39130.1| peptide chain release factor-like protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 302

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 65/228 (28%), Positives = 116/228 (50%), Gaps = 10/228 (4%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRW-AEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
             + V   AGG E+  +A  L  MY  +  E  K++   + + DG EA   S    ++G 
Sbjct: 44  WNINVEGKAGGEEASLFAAELAEMYRTYAMEFCKWEVCPVAMDDGSEA-CSSNEFQVRGE 102

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
             Y  +  E GVH++ R+   D+  +  TS +   + P V D + +++ ESDC+ID  R 
Sbjct: 103 GVYRNMHHEIGVHKVQRVPVTDATGKMQTSTAVFTLMP-VLDPVSVDVHESDCKIDFVRG 161

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQ + ++ + V +TH P+G+ V+C Q RS   NK  A  M+  ++  L  + +E+ 
Sbjct: 162 SGPGGQGMQSSSNCVVLTHKPSGISVKCHQCRSALGNKELALQMVAQQI--LARRVKEQN 219

Query: 296 ANIGESSKTEIGWGR---QIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
           +++ ++ + +   G    ++R+Y   P   V D R   +  + S  ++
Sbjct: 220 SSLHKAWQNQWSSGERSDRMRTYNY-PQNRVTDHRIG-KDYALSSFME 265


>gi|154270254|ref|XP_001535983.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150410054|gb|EDN05442.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 223

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 60/195 (30%), Positives = 96/195 (49%), Gaps = 21/195 (10%)

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI--------------EIEIS 224
              + E GVHR+ R+   ++  R HTS  S+ + P     I              +  I 
Sbjct: 2   RRFETEAGVHRVQRVPTTENKGRTHTSAVSVVILPSYPSIIGEGDSELNFDDPNSDYYID 61

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
             +  ++  RA GAGGQHVN T+SA+R+THIPTG+VV  Q  RSQH+N+ +AW++LRA++
Sbjct: 62  PQEVNVEKMRAGGAGGQHVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWHLLRARI 121

Query: 285 YELELQKREEIANIGE----SSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLD 340
            +   + REE              ++G G +IR+Y         D R+ +   +   +++
Sbjct: 122 AQQRREAREEEMVKLRRGVMGGVAKMGRGDKIRTYNFG-QNRCTDHRSGLTLHNLGSIME 180

Query: 341 G--DLDDFMKATLAI 353
           G   L+  M +    
Sbjct: 181 GGDGLEKIMDSVRGW 195


>gi|213861334|ref|ZP_03385804.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 197

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 120/195 (61%), Positives = 143/195 (73%)

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ A
Sbjct: 3   QGLDDVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQA 62

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
           G+GGTE+QDWA+MLLRMY RWAE R FKTE +E  +GE AGIKSAT+ I G  AYGWL+ 
Sbjct: 63  GSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLRT 122

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
           E GVHRLVR SP+DS  RRHTSFSS +VYP VDD I+I+I+ +D RID YRASGAGGQHV
Sbjct: 123 ETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHV 182

Query: 244 NTTDSAVRITHIPTG 258
           N T+SAVRITHIPTG
Sbjct: 183 NRTESAVRITHIPTG 197


>gi|213583820|ref|ZP_03365646.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 95

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 49/94 (52%), Positives = 64/94 (68%), Gaps = 1/94 (1%)

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
           + QCQ +RSQHKNK QA   ++AKLYELE+QK+       E +K++IGWG QIRSYVL  
Sbjct: 1   MTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWGSQIRSYVLDD 60

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
              +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 61  -SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 93


>gi|315283645|ref|ZP_07871778.1| peptide chain release factor 2 [Listeria marthii FSL S4-120]
 gi|313612712|gb|EFR86721.1| peptide chain release factor 2 [Listeria marthii FSL S4-120]
          Length = 70

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 32/68 (47%), Positives = 41/68 (60%)

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
            E +++E         + EIGWG QIRSYV  PY MVKD RT+ E  +   V+DGDLDDF
Sbjct: 1   KEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTSYETGNIQAVMDGDLDDF 60

Query: 347 MKATLAIK 354
           + A L  +
Sbjct: 61  INAYLRSR 68


>gi|149919721|ref|ZP_01908199.1| peptide chain release factor RF-1 [Plesiocystis pacifica SIR-1]
 gi|149819492|gb|EDM78922.1| peptide chain release factor RF-1 [Plesiocystis pacifica SIR-1]
          Length = 311

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 59/287 (20%), Positives = 101/287 (35%), Gaps = 11/287 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +N  +R   L     D  +  +      L RE   L        ++ +         EL
Sbjct: 9   IENIAERHEELGEMICDQEVMADKRRFLELSREHAELTPVAMAFAKLVELERQLGETREL 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + D   + Q        +++                D+ +  LE+ AG GG E+  + 
Sbjct: 69  LDDPDMRELAQADVRELGGQVEDAETELTRLLTPKDPNDAKNVILEIRAGTGGDEAGLFV 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY R++E+ ++  + +E  +    G K  T  ++G  A+  LK E+GVHR+ R+ 
Sbjct: 129 ADLWRMYNRFSERHRWAIDQVEFSENSAGGFKEITGRVQGKGAWAQLKFERGVHRVQRVP 188

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI---------DTYRASGAGGQHVNT 245
             +S  R HTS +++ + P    S    I  +              T      G      
Sbjct: 189 ATESQGRIHTSTATVAIMPEPRTSTSTSIPRTSSSRPCARAARAGSTSTPRLRGPPAPQA 248

Query: 246 TDSAVRITHIPTGVVVQCQQE-RSQHKNKAQAWNMLRAKLYELELQK 291
               VR             +  RS+  ++ Q+    R      E QK
Sbjct: 249 HGHRVRCDQRSPAQNASSHEALRSRCSDQIQSKQRRRPWSDRREAQK 295


>gi|219129897|ref|XP_002185114.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403293|gb|EEC43246.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 283

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 89/246 (36%), Positives = 126/246 (51%), Gaps = 29/246 (11%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA 168
             +   +DA +E+ AG GG E+  +A+ LL  Y + A   ++K E L     +  GI+ A
Sbjct: 42  DEDDYESDAIIEIRAGTGGDEASLFASELLEAYQKAAMAIRWKVEVLAESRTDIGGIREA 101

Query: 169 TLLIKGPN-------------------AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSI 209
           ++ I G                      YG  K E GVHR+ R+   DS  R HTS  SI
Sbjct: 102 SISISGNASFRLPATDSEREDSGPLLGPYGAFKFESGVHRVQRVPINDS--RIHTSACSI 159

Query: 210 WVYPV--VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
            V P      + +  +  S+ RI+T R+SGAGGQHVNTTDSAVRITH+PTG+    Q ER
Sbjct: 160 AVLPFVSSISNEKELLPMSELRIETMRSSGAGGQHVNTTDSAVRITHLPTGITAAIQDER 219

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVK 324
           SQHKNKA+A  ++ A++ +   Q+ +     GE     +G      +IR+Y   P   + 
Sbjct: 220 SQHKNKAKALKLITARVRD--RQRTDAQLARGELRSNLMGGGDRSERIRTYNY-PQDRIT 276

Query: 325 DLRTNI 330
           D R  +
Sbjct: 277 DHRCKV 282


>gi|315254830|gb|EFU34798.1| PCRF domain protein [Escherichia coli MS 85-1]
          Length = 210

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/194 (26%), Positives = 81/194 (41%), Gaps = 1/194 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+      ++ +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSFSS 208
             +S  R HTS   
Sbjct: 189 ATESQGRIHTSACY 202


>gi|124507187|ref|XP_001352190.1| peptide release factor, putative [Plasmodium falciparum 3D7]
 gi|23505221|emb|CAD52001.1| peptide release factor, putative [Plasmodium falciparum 3D7]
          Length = 404

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 73/321 (22%), Positives = 138/321 (42%), Gaps = 11/321 (3%)

Query: 29  KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET 88
           K  +   + ++I+ +        L+  +   K++   + D+    E  L++++       
Sbjct: 38  KISEHKAYSDIIKLQKHSHMLHTLNEELDIYKQLLKEIIDSKESYEERLKKNEDINQLNC 97

Query: 89  SDNLQRIKLEVEYKQFESLL---SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWA 145
                   +  +   F           D+ +  +E+ AG GG E++ ++  L  MY  + 
Sbjct: 98  HIESVTNLIIDDIILFYKSYVNQDHHLDATEIKMEITAGVGGFEAKMFSKELFHMYENFC 157

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
             R +  E  E+ + E    K+  L I+G N Y     E G+HR+ R+    ++++  TS
Sbjct: 158 RVRNYDYEMKEVINDEAKENKNIVLYIRGNNIYEDFYQENGIHRVQRVP--INSNKVQTS 215

Query: 206 FSSIWVYPVVDDSIEIE----ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
            S +++         I      S+ D  I T R+ GAGGQ VN  ++ V+I H PT + V
Sbjct: 216 TSIVFICDEKKQKDNIMKKINFSKQDLLIQTKRSGGAGGQSVNKNETCVKILHKPTNIFV 275

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQ-KREEIANIGESSKTEIGWGRQIRSYVLQPY 320
           + Q+  SQ  NK  A  +L+ KLY    + ++       ++ K       +IR+Y    +
Sbjct: 276 EVQKTSSQIHNKNLAMQLLKDKLYNFYYELEKNNFLKEKKNQKQSADRSHKIRTYNFL-H 334

Query: 321 QMVKDLRTNIEKTSPSDVLDG 341
            ++ D  TN + +   +   G
Sbjct: 335 DVIIDHITNTQYSGIQNFFKG 355


>gi|291533125|emb|CBL06238.1| Protein chain release factor B [Megamonas hypermegale ART12/1]
          Length = 182

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 103/169 (60%), Positives = 133/169 (78%), Gaps = 1/169 (0%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY RWAE+  F  E  ++  G+EAG+KS TLLIKG NAYG+LK E+GVHRLVRISP+D+N
Sbjct: 1   MYGRWAERNGFSVETADLLPGDEAGVKSVTLLIKGHNAYGYLKSEKGVHRLVRISPFDAN 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
           SRRHTSFS+  V P +DD +E++I+ +D R+DTYRASGAGGQH+N TDSAVR+THIPTGV
Sbjct: 61  SRRHTSFSACDVMPEIDDDVEVDINMADVRVDTYRASGAGGQHINKTDSAVRMTHIPTGV 120

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE-SSKTEIG 307
           V QCQ ERSQ +N+ Q   +LRA+L+ELE++K+E+     + +SK   G
Sbjct: 121 VAQCQSERSQLQNREQCLRLLRARLFELEMEKKEKNLQHLKVTSKKLNG 169


>gi|270289542|ref|ZP_06195844.1| peptide chain release factor 2 [Chlamydia muridarum Weiss]
          Length = 182

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 98/166 (59%), Positives = 121/166 (72%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY+RWA    +K E ++  DGE AGIK  TL + G  AYG+ K E GVHRLVRISP+DSN
Sbjct: 1   MYSRWANSHGWKVEVIDRLDGEVAGIKHITLKLIGEYAYGYAKAESGVHRLVRISPFDSN 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
           ++RHTSF+S+ V+P +DD IE+EI   D RIDTYR+SGAGGQHVN TDSAVRITH PTG+
Sbjct: 61  AKRHTSFASVEVFPEIDDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGI 120

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           VV CQ ERSQ +N+    NMLRA++Y+  LQ+R E  N     K +
Sbjct: 121 VVSCQSERSQIQNREACMNMLRARIYQKLLQERLEKQNTNRKEKKK 166


>gi|313622391|gb|EFR92858.1| peptide chain release factor 2 [Listeria innocua FSL J1-023]
          Length = 55

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 31/53 (58%), Positives = 36/53 (67%)

Query: 302 SKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            + EIGWG QIRSYV  PY MVKD RTN E  +   V+DGDLDDF+ A L  +
Sbjct: 1   EQKEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSR 53


>gi|169838094|ref|ZP_02871282.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [candidate division
           TM7 single-cell isolate TM7a]
          Length = 190

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 86/172 (50%), Positives = 118/172 (68%), Gaps = 2/172 (1%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           M+TR+AE+ ++KTE +E ++    G+K  T LIKG  AY  LK E GVHR+ R+   +S+
Sbjct: 1   MFTRYAERNRWKTEIIEKNEIGVGGLKEVTFLIKGHGAYSRLKFESGVHRVQRVPATESS 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ V P +DD  E+EI+ SD +IDTYR+SGAGGQHVNTTDSAVRITH+PTG+
Sbjct: 61  GRVHTSTITVAVLPEIDDVSEVEINPSDLKIDTYRSSGAGGQHVNTTDSAVRITHLPTGL 120

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ 311
           VV  Q  RSQ KNK  A  +L +KLYE+E +K+          ++++G G +
Sbjct: 121 VVTSQDGRSQIKNKEAAMKVLVSKLYEMECEKQRSAVEN--ERRSQVGSGDR 170


>gi|156305180|ref|XP_001617535.1| hypothetical protein NEMVEDRAFT_v1g157388 [Nematostella vectensis]
 gi|156194391|gb|EDO25435.1| predicted protein [Nematostella vectensis]
          Length = 80

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/78 (50%), Positives = 51/78 (65%), Gaps = 1/78 (1%)

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
               LRAKLYE+E+ KR   A   E SK +IGWG QIRSYVL     +KDLRT ++ ++ 
Sbjct: 2   CMKQLRAKLYEMEMMKRNAAAQELEDSKADIGWGSQIRSYVLDDQ-RIKDLRTGVQTSNC 60

Query: 336 SDVLDGDLDDFMKATLAI 353
             VLDG+LD F++A+L  
Sbjct: 61  DRVLDGELDMFIEASLKA 78


>gi|146332693|gb|ABQ22852.1| mitochondrial peptide chain release factor 1 precursor-like protein
           [Callithrix jacchus]
          Length = 192

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 67/175 (38%), Positives = 98/175 (56%), Gaps = 10/175 (5%)

Query: 184 EQGVHRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           E G+HR+ RI     +SR     + +   +     D +++++   D RIDT+RA GAGGQ
Sbjct: 1   EGGIHRVQRIPEVGLSSRMQRIHTGTMSVIILPQPDEVDVKLDPKDLRIDTFRARGAGGQ 60

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           HVNTTDSAVR+ HIPTG+VV+CQQERSQ +NK  A ++LRA+LY+  ++K         +
Sbjct: 61  HVNTTDSAVRLVHIPTGLVVECQQERSQIRNKEIALSVLRARLYQQIIEKN--KCQQHST 118

Query: 302 SKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG--DLDDFMKATL 351
            K ++G G    +I +Y       V D R   E     + + G   LD  ++  L
Sbjct: 119 RKLQVGTGAQSERILTYNF-TQDRVTDHRIAYEVRDIKEFVCGGKALDQLIQRLL 172


>gi|323964709|gb|EGB60180.1| peptide chain release [Escherichia coli M863]
          Length = 200

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 50/192 (26%), Positives = 81/192 (42%), Gaps = 1/192 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     +     +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGEAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + Q+      ++ +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
             L RMY+R+AE R+++ E +   +GE  G K     I G   YG LK E G HR+ R+ 
Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVP 188

Query: 195 PYDSNSRRHTSF 206
             +S  R HTS 
Sbjct: 189 ATESQGRIHTSA 200


>gi|213419806|ref|ZP_03352872.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 133

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 53/118 (44%), Positives = 77/118 (65%), Gaps = 6/118 (5%)

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R+SGAGGQHVNTTDSA+RITH+PTG+VV+CQ ERSQHKNKA+A ++L A+++  E  KR+
Sbjct: 1   RSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQ 60

Query: 294 EIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
           +      + +  +G G +    R+Y   P   V D R N+      + ++G LD  ++
Sbjct: 61  Q--AEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIE 115


>gi|46190861|ref|ZP_00121023.2| COG1186: Protein chain release factor B [Bifidobacterium longum
           DJO10A]
          Length = 115

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 45/104 (43%), Positives = 65/104 (62%), Gaps = 1/104 (0%)

Query: 251 RITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
           RITH+PTG+VV  Q ERSQ +N+A A  +L+++L  L  ++  +          +  WG 
Sbjct: 2   RITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVLRHEEEAKKKKELAGD-IKASWGD 60

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           Q+RSYVL PYQMVKDLRT  E +    V DGD++ F++A +  +
Sbjct: 61  QMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINAFIEAGIRWR 104


>gi|322829249|gb|EFZ32717.1| peptide chain release factor 1, putative [Trypanosoma cruzi]
          Length = 476

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 73/291 (25%), Positives = 131/291 (45%), Gaps = 29/291 (9%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           L++ E+D   L     N+      V  ++ ES  +  + S    LEV   AGG E+  +A
Sbjct: 155 LSMLEEDMESLLNQVRNMDDCVNGVMARRLESSDTLGSSSRAWVLEVTGKAGGEEASLFA 214

Query: 135 NMLLRMYTRWAE-KRKFKTEALE--------------------IHDGEEAGIKSATLLIK 173
           + L  MY  ++   R ++ E  E                                     
Sbjct: 215 SELAEMYREYSTGVRNWRIEEAENGAGGGGGGAAGGGGGGDASALSAPALASTGVKFKAI 274

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G + Y  L+ E GVH++ R+   D + +  TS + + + P V D + + + E+DC+I+  
Sbjct: 275 GDSVYRNLRHEIGVHKVQRVPLTDQDGKMQTSTAVVTLMP-VLDPVSVNVHENDCKIEFV 333

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R SG GGQ + ++ +AV +THIP+G+ V+C Q RS   NK  A  ++  +L  L  + ++
Sbjct: 334 RGSGPGGQGMQSSSNAVCLTHIPSGISVKCHQSRSALGNKETALQLVAQQL--LAQRVKD 391

Query: 294 EIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           + ++  E+ + +   G +   +R+Y   P   V D R   +    +  ++G
Sbjct: 392 QNSSFHEAWRNQWSSGERSDKMRTYNF-PQNRVTDHRLGKDFP-LNTFMEG 440


>gi|71650872|ref|XP_814125.1| peptide chain release factor 1 [Trypanosoma cruzi strain CL Brener]
 gi|70879071|gb|EAN92274.1| peptide chain release factor 1, putative [Trypanosoma cruzi]
          Length = 456

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 77/322 (23%), Positives = 139/322 (43%), Gaps = 27/322 (8%)

Query: 42  AKMLMRERQHLDNAISFIKEIQDRLCDN-LILLELALEEDDCSILQETSDNLQRIKLEVE 100
           A+ +      L+  +    +I             L++ E+D   L     N+      V 
Sbjct: 104 AEEISGYLVKLNENVKLRDQILLEKDSVGEDRDLLSILEEDMESLLNQVRNMDDCVNGVM 163

Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE-KRKFKTEALE--- 156
            ++ ES  +  + S    LEV   AGG E+  +A  L  MY  ++   R ++ E  E   
Sbjct: 164 ARRLESSDTLGSSSRAWVLEVTGKAGGEEASLFAAELAEMYREYSTGVRNWRIEEAENGA 223

Query: 157 --------------IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRR 202
                                          G N Y  L+ E GVH++ R+   D + + 
Sbjct: 224 GGAAGGGGGGGDASALSAPALASTGVKFKAIGDNVYRNLRHEIGVHKVQRVPLTDQDGKM 283

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
            TS + + + P V D + + + E+DC+I+  R SG GGQ + ++ +AV +THIP+G+ V+
Sbjct: 284 QTSTAVVTLMP-VLDPVSVNVHENDCKIEFVRGSGPGGQGMQSSSNAVCLTHIPSGISVK 342

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQP 319
           C Q RS   NK  A  ++  +L  L  + +++ +++ E+ + +   G +   +R+Y   P
Sbjct: 343 CHQSRSALGNKEIALQLVAQQL--LAQRVKDQNSSLHEAWRNQWSSGERSDKMRTYNY-P 399

Query: 320 YQMVKDLRTNIEKTSPSDVLDG 341
              V D R   +    +  ++G
Sbjct: 400 QNRVTDHRLGKDFP-LNTFMEG 420


>gi|328466430|gb|EGF37577.1| peptide chain release factor 2 [Lactobacillus rhamnosus MTCC 5462]
          Length = 189

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 99/189 (52%), Positives = 136/189 (71%)

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           +  +E D  +  E    L+ ++ +++  + + LL+G  D N+A LE+H GAGGTESQDW 
Sbjct: 1   MLQDEPDPDLQHEEETKLKDLQEKLDQYEMQLLLNGPYDHNNAILEIHPGAGGTESQDWG 60

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           +ML+RMY RWA++  FK E  +   G+EAGIKS TLLI G NAYG LK E+GVHRLVRIS
Sbjct: 61  SMLMRMYQRWADQNGFKVEVADYQPGDEAGIKSVTLLINGENAYGLLKSEKGVHRLVRIS 120

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P+DS  RRHTSF+S+ V P +D+SIE++I   D +++ +R+SGAGGQH+N T SAVR+ H
Sbjct: 121 PFDSAGRRHTSFASVDVMPELDNSIEVDIRPEDIKMEVFRSSGAGGQHINKTSSAVRLIH 180

Query: 255 IPTGVVVQC 263
           +PTG+V   
Sbjct: 181 LPTGIVTSS 189


>gi|145362209|ref|NP_973706.2| peptide chain release factor, putative [Arabidopsis thaliana]
 gi|110735990|dbj|BAE99969.1| putative peptide chain release factor [Arabidopsis thaliana]
 gi|330255694|gb|AEC10788.1| Peptide chain release factor 1 [Arabidopsis thaliana]
          Length = 256

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 83/240 (34%), Positives = 132/240 (55%), Gaps = 6/240 (2%)

Query: 39  VIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQET-----SDNLQ 93
             E     +E + L +++  I +++ +  +   L  L  E  D   + +       + ++
Sbjct: 16  PEEFSRANKELRKLRDSMLLINDLRAKQKEIDGLKSLVSESSDDKDMLDLAVGELDEAVE 75

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
             K          L   EAD  D  LEV AG GG E+  +A  + RMY R+++K+ +K +
Sbjct: 76  EEKRLQTLLLKSLLPKDEADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKGWKFD 135

Query: 154 ALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
            ++I + +  G K A+  I G + YG LK E G+HR+ RI   + + R HTS  S+ + P
Sbjct: 136 IVDITESDMKGYKEASAAICGASVYGKLKFESGIHRVQRIPITEKSGRIHTSAISVAILP 195

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
              D +++++   D RIDTYR+ G+GGQH NTT+SAVRI H+PTG++V  Q ERSQH ++
Sbjct: 196 -QADEVDVQLRNEDLRIDTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMSQ 254


>gi|325119759|emb|CBZ55312.1| hypothetical protein NCLIV_057350 [Neospora caninum Liverpool]
          Length = 427

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 63/186 (33%), Positives = 97/186 (52%), Gaps = 5/186 (2%)

Query: 157 IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
                  G  +   L   P+A+ +L  E G+HR+ R+ P ++  R  TS +++ V P   
Sbjct: 201 EIQAGVGGEDA--ALFSRPDAFRFLSLEAGIHRVQRVPPTEARGRMQTSATAVTVLPRSS 258

Query: 217 D-SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           +   +I++S    +ID  RASG GGQ VN +++AVRITH PTGV V C + +SQ +NK  
Sbjct: 259 NLEDKIDLSPPTLKIDFMRASGPGGQSVNKSETAVRITHKPTGVSVHCMRTQSQTENKNL 318

Query: 276 AWNMLRAKLYELELQKREEIA-NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTS 334
           A  +LRA+L +  ++K  E      ++ K       +IR+Y  Q   +V D R  +    
Sbjct: 319 ALELLRAQLLQQMMRKASEERGRAIDAQKGSKDRSEKIRTYNFQ-RDVVTDHRCRMHVNG 377

Query: 335 PSDVLD 340
             D LD
Sbjct: 378 VEDFLD 383


>gi|330951102|gb|EGH51362.1| peptide chain release factor 1 [Pseudomonas syringae Cit 7]
          Length = 111

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 6/105 (5%)

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---R 310
           H+P+G+VV+CQ+ERSQHKN+A+A + L AKL +   Q       I    K  +G G    
Sbjct: 1   HLPSGIVVECQEERSQHKNRARAMSWLSAKLND--QQTSAAANAIASERKLLVGSGDRSE 58

Query: 311 QIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +IR+Y   P   V D R N+   S  +VL G +D  ++  LA  +
Sbjct: 59  RIRTYNF-PQGRVTDHRVNLTLYSLDEVLAGGVDAVIEPLLAEYQ 102


>gi|116334943|ref|YP_802438.1| putative peptide chain release factor A [Candidatus Carsonella
           ruddii PV]
 gi|116235224|dbj|BAF35072.1| putative peptide chain release factor A [Candidatus Carsonella
           ruddii PV]
          Length = 229

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 67/235 (28%), Positives = 117/235 (49%), Gaps = 12/235 (5%)

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
           N   +E+  G GG ES ++A  + +MY ++ EK+    E +   +      K   L ++ 
Sbjct: 3   NYLIIEIRQGIGGEESINFAKDIYKMYVKFFEKQNINFEIISNSN-----FKEIILKVEN 57

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
                 L  E G+HR+ RI   ++  R HTS  +++V   ++    +++   D +I+  +
Sbjct: 58  NVFDKKLLNESGIHRVQRIPKSETQGRVHTSTCTVFVA-NINLDNNLKLKNEDLKIEICK 116

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +SG+GGQHVN T+SA++I H+PT + V+C  ERSQ+ NK +A  +L  K+  L+ QK   
Sbjct: 117 SSGSGGQHVNKTNSAIKIIHLPTKIAVECSDERSQNLNKTKALIILNMKI--LKFQKNNY 174

Query: 295 IANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDF 346
              +    K  I    +   IR+Y       + D   N      + +L+G+ +  
Sbjct: 175 NTQLNNVRKKLISNSERAKKIRTYNF-TNNKITDHINNKNYFQLNKILNGEFNLI 228


>gi|298369317|ref|ZP_06980635.1| peptide chain release factor 1 [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298283320|gb|EFI24807.1| peptide chain release factor 1 [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 106

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 6/100 (6%)

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSY 315
           +VV+CQ  RSQH NKAQA  +L A+L +   QKRE  A      K+ IG G +   IR+Y
Sbjct: 1   MVVECQDGRSQHANKAQAMKVLAARLNDA--QKREAQAKEAAERKSLIGSGDRSECIRTY 58

Query: 316 VLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              P   V D R N+       V+DGDL++   A +A  +
Sbjct: 59  NY-PQGRVTDHRINLTLHKLDFVMDGDLEEITNALIAEHQ 97


>gi|71393327|ref|XP_802218.1| peptide chain release factor 1 [Trypanosoma cruzi strain CL Brener]
 gi|70859733|gb|EAN80772.1| peptide chain release factor 1, putative [Trypanosoma cruzi]
          Length = 270

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/175 (28%), Positives = 93/175 (53%), Gaps = 8/175 (4%)

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
               G + Y  L+ E GVH++ R+   D + +  TS + + + P V D + + + E+DC+
Sbjct: 65  FKAIGDSVYRNLRHEIGVHKVQRVPLTDQDGKMQTSTAVVTLMP-VLDPVSVNVHENDCK 123

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           I+  R SG GGQ + ++ +AV +THIP+G+ V+C Q RS   NK  A  ++  +L  L  
Sbjct: 124 IEFVRGSGPGGQGMQSSSNAVCLTHIPSGISVKCHQSRSALGNKETALQLVAQQL--LAQ 181

Query: 290 QKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           + +++ ++  E+ + +   G +   +R+Y   P   V D R   +    +  ++G
Sbjct: 182 RVKDQNSSFHEAWRNQWSSGERSDKMRTYNF-PQNRVTDHRLGKDFP-LNTFMEG 234


>gi|213855686|ref|ZP_03383926.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 78

 Score =  101 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/77 (48%), Positives = 50/77 (64%), Gaps = 1/77 (1%)

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
              ++AKLYELE+QK+       E +K++IGWG QIRSYVL     +KDLRT +E  +  
Sbjct: 1   MKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQ 59

Query: 337 DVLDGDLDDFMKATLAI 353
            VLDG LD F++A+L  
Sbjct: 60  AVLDGSLDQFIEASLKA 76


>gi|237840539|ref|XP_002369567.1| peptide chain release factor 1, putative [Toxoplasma gondii ME49]
 gi|211967231|gb|EEB02427.1| peptide chain release factor 1, putative [Toxoplasma gondii ME49]
 gi|221503426|gb|EEE29124.1| peptide chain release factor, putative [Toxoplasma gondii VEG]
          Length = 497

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 61/186 (32%), Positives = 98/186 (52%), Gaps = 9/186 (4%)

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G+      ++GP  Y  L  E GVHR+ R+   ++  R HTS +++ +     +   +E
Sbjct: 272 GGVTCIAFRVEGPGVYRQLLKESGVHRVQRVPRTEAQGRIHTSTATVAIVA-EHNFRGVE 330

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I+++D  I T R+SG GGQ+VN  ++AV + H+PTG+ V CQQER+Q  NK  A  +L  
Sbjct: 331 INDADLVIRTARSSGCGGQNVNKVETAVDLLHVPTGIRVFCQQERTQAANKKAAKAVLLK 390

Query: 283 KLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLR-TNIE-KTSPSD 337
           KL     +  E +  + E  + ++  G    ++R+Y  +    V + R T  E   S   
Sbjct: 391 KLAARHEE--EVVQQMREERRDQVSSGLRSERVRTYNFRD-GRVNEHRLTGGEGLFSLKS 447

Query: 338 VLDGDL 343
           VL+G L
Sbjct: 448 VLEGQL 453


>gi|146340|gb|AAA23958.1| peptide-chain-release factor 2 [Escherichia coli]
          Length = 72

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 1/71 (1%)

Query: 283 KLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           KLYELE+QK+       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDG 
Sbjct: 1   KLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGS 59

Query: 343 LDDFMKATLAI 353
           LD F++A+L  
Sbjct: 60  LDQFIEASLKA 70


>gi|218196675|gb|EEC79102.1| hypothetical protein OsI_19734 [Oryza sativa Indica Group]
 gi|222631381|gb|EEE63513.1| hypothetical protein OsJ_18329 [Oryza sativa Japonica Group]
          Length = 214

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 3/215 (1%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY+ WA K+  K   +E        + +A + I+    +G L GE+G HR++  S  ++ 
Sbjct: 1   MYSSWARKQGCKDGLVEKITSTSGRVWTAAIEIESEYMFGTLTGEKGTHRMIYPSVDNAG 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
           +   TS     +   +D  + + + E+D  I    +      H N   SA+R+ HI TGV
Sbjct: 61  TYEATSARVDIIPLFLDRPVNLHLDENDLEISPSPSDHKRRDHRN---SAIRVQHIRTGV 117

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQP 319
             +   ERS   NK +A + L+AKL  +  + R       +    E  + R+ R Y   P
Sbjct: 118 TAESSGERSYFANKMKAISRLKAKLLVISRELRSSNLKTIKRQTVEELYSRETRRYKFGP 177

Query: 320 YQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
            ++V DL T ++ +  + VLDGD+D F++  +  +
Sbjct: 178 QKLVHDLNTGLQLSELNSVLDGDIDPFIRGRIVSR 212


>gi|326478702|gb|EGE02712.1| peptide chain release factor 1 [Trichophyton equinum CBS 127.97]
          Length = 360

 Score = 99.9 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 78/298 (26%), Positives = 134/298 (44%), Gaps = 28/298 (9%)

Query: 43  KMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           +   +    +    + +K+          L  L  E    + L+  +++     +     
Sbjct: 44  RAAAKRIGEIAPVANALKDWDTAHESITELQGLIDEPSTDTELKSLAEDDITTTIGTLSS 103

Query: 103 -----QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEI 157
                +   +           +E+  GAGG E+  +A  +LRMYT +   R  +T  +++
Sbjct: 104 LSDTLKRALIPRHPFADMPCLIEIRPGAGGDEAGLFAAKMLRMYTSFCSSRGLRTTIIKM 163

Query: 158 HDGEEAG------IKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
              +  G      +    + ++ P +Y  L+ E GVHR+ R+   ++  R HTS  S+ +
Sbjct: 164 EAEDGVGAGAEERLSEVVMEVETPGSYNILRTEAGVHRVQRVPATEAKGRTHTSAVSVMI 223

Query: 212 YP-------------VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
            P               D + +  ++  D + + +RASGAGGQHVN T+SAVR+THIPTG
Sbjct: 224 LPSFPENNQEDSPLNFDDPNSDYYVNPQDVQSEKFRASGAGGQHVNKTESAVRLTHIPTG 283

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE----SSKTEIGWGRQI 312
            V+  Q  RSQH+N+ +AW +LRAKL +   + RE+              + G G +I
Sbjct: 284 TVISMQDSRSQHENRRKAWLLLRAKLAQARREAREQEMMELRRGAMGGVNKTGRGDKI 341


>gi|95007275|emb|CAJ20495.1| peptide chain release factor 1, putative [Toxoplasma gondii RH]
 gi|221482780|gb|EEE21111.1| peptide chain release factor, putative [Toxoplasma gondii GT1]
          Length = 497

 Score = 99.9 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 59/186 (31%), Positives = 97/186 (52%), Gaps = 9/186 (4%)

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
            G+      ++GP  Y  L  E GVHR+ R+   ++  R HTS +++ +     +   + 
Sbjct: 272 GGVTCIAFRVEGPGVYRQLLKESGVHRVQRVPRTEAQGRIHTSTATVAIVA-EHNFQGVA 330

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I+++D  I T R+SG GGQ+VN  ++AV + H+PTG+ V CQQER+Q  NK  A  +L  
Sbjct: 331 INDADLVIRTARSSGCGGQNVNKVETAVDLLHVPTGIRVFCQQERTQAANKKAAKAVLLK 390

Query: 283 KLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLR-TNIE-KTSPSD 337
           KL     +  E +  + E  + ++  G    ++R+Y  +    V + R T  E   S   
Sbjct: 391 KLAARHEE--EVVQQMREERRDQVSSGLRSERVRTYNFRD-GRVNEHRLTGGEGLFSLKS 447

Query: 338 VLDGDL 343
           +L+G L
Sbjct: 448 ILEGQL 453


>gi|156081736|ref|XP_001608361.1| peptide release factor [Plasmodium vivax SaI-1]
 gi|148800932|gb|EDL42337.1| peptide release factor, putative [Plasmodium vivax]
          Length = 446

 Score = 99.5 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 63/239 (26%), Positives = 113/239 (47%), Gaps = 9/239 (3%)

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE-IHDGEEAGIKSA 168
              D+++  LE+  G GG E++ + + LL MY  + + + F+   +    D  + G ++ 
Sbjct: 180 HHLDTDEVKLEITPGVGGLEAKLFCSDLLSMYEHFCKLKDFQCTLIRGESDDAKDGHRNI 239

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP----VVDDSIEIEIS 224
             ++KG   Y     E G+HR+ R+    ++ +  TS S ++VY           ++ + 
Sbjct: 240 VAVVKGERVYEHFVQENGIHRVQRVP--VNSKKIQTSTSVVFVYDEESLRKKIKKKMNLK 297

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           +SD  I+T R+ G GGQ VN  ++ V++ H PT + V+ Q+  SQ +N+  A   L+ KL
Sbjct: 298 KSDLIIETKRSGGPGGQSVNKNETCVKVLHKPTNISVEVQKTSSQMQNRNMAIEALKTKL 357

Query: 285 YE-LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
           +     Q+++       S K       +IRSY       V D  +N++         GD
Sbjct: 358 FSFYYQQEKDLFFKCRRSHKMSGDRSEKIRSYNFI-NDFVTDHLSNVQYPGIDLFFRGD 415


>gi|294949753|ref|XP_002786323.1| peptide chain release factor 1, putative [Perkinsus marinus ATCC
           50983]
 gi|239900543|gb|EER18119.1| peptide chain release factor 1, putative [Perkinsus marinus ATCC
           50983]
          Length = 423

 Score = 99.5 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 75/340 (22%), Positives = 129/340 (37%), Gaps = 33/340 (9%)

Query: 40  IEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEV 99
            E   +  E   L+      +  +    D  +      E D         +N     L  
Sbjct: 79  DEMLSVSDEIAKLEQ-----ESAKLERNDISMKSMFNAEVDSQLEKIIEIENRLFDHLHT 133

Query: 100 EY----KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
                     +  +   D++D  +E+  G GG E+  W   +  M  R+A    +    +
Sbjct: 134 RMSNEGIDCATWHAYVKDASDCTVEIRPGVGGVEAGKWCKDIFDMLERFAGIMGWAAPEV 193

Query: 156 EIHDG-EEAGIKSATLLI---------KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           ++ +   ++G +                    +G+LK E G+HR+ R+  + ++S   TS
Sbjct: 194 KVMEQGWQSGYRQIIADFFLKPGVKRTPEKGIFGYLKFEAGIHRVQRVPSWPADSLPQTS 253

Query: 206 FSSIWVYPVVDDS---IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
             S+ V P  D +   I +          T ++SG GGQ VN    AVRI HI +GV   
Sbjct: 254 ACSVVVLPREDPNSNLIPVLKPHEYKVWITKKSSGPGGQCVNAAHQAVRIRHIESGVEGF 313

Query: 263 CQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQP 319
               R+   NKA A   +  K+ E + +K  +   I    K  +G G    +IRSY    
Sbjct: 314 ADCYRALKSNKALALQQVSQKIMEEKGKKIAKERGII--RKQHMGSGDRSEKIRSYNYL- 370

Query: 320 YQMVKDLR---TNIEKTSPSDVLDGD--LDDFMKATLAIK 354
              V D R   +     +  +++DG+  L D ++     +
Sbjct: 371 NGTVVDHRLPKSEDGPNALEEIMDGEGLLHDIIEPLRLQE 410


>gi|20799561|gb|AAM28548.1|AF494518_1 peptide releasing factor 1 [Tomato big bud phytoplasma]
          Length = 269

 Score = 99.1 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 85/275 (30%), Positives = 134/275 (48%), Gaps = 19/275 (6%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKM--LMRERQHLDNAISFIKEIQDRLCDN 69
           +FD  +   ++      K  +     N    +   L++E   L   +   +E      + 
Sbjct: 1   MFDKLELIKKKYLQNQKKILE-----NPKNFQNINLLKEMNKLQKIVFAYEEYIQLKKEY 55

Query: 70  LILL------ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS----NDAYL 119
             +          + E++   L E   N   IK++ +  Q E LL  +  +     D  +
Sbjct: 56  KTIQKTLSQXNDKILEEEIIQLAEXEKNNLIIKIKXKTNQLEKLLYPDQYNAEDKQDVIV 115

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
           E+  G GG E+  + + L R Y ++ E +K+K E + +    + GI S   +I G N + 
Sbjct: 116 EIKKGIGGQEANLFVSDLFRAYKKYIEYKKWKLEIINLLSTSKEGISSVEFVINGKNVFY 175

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           +LK E G+HR+ RI   ++  R HTS   I V P  +   +IEI+ +D R+DT+ ASG G
Sbjct: 176 YLKYESGIHRVQRIPKTENKGRIHTSTVKILVIPNNNHQ-KIEINWNDIRVDTFNASGPG 234

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
           GQ VNTT SAVR+TH+PTG+   CQ  +SQH NK 
Sbjct: 235 GQSVNTTKSAVRLTHLPTGISSSCQIAKSQHDNKE 269


>gi|407639|gb|AAD12326.1| unknown [Mycoplasma genitalium]
          Length = 113

 Score = 99.1 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 6/113 (5%)

Query: 246 TDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           T+SAVRITH+PTG+VV CQ+ +SQ  N+ +A  MLRAKL+E    K+          K++
Sbjct: 1   TESAVRITHLPTGIVVACQEGKSQFSNRDKAMKMLRAKLWENAQNKQLSTQADL--RKSQ 58

Query: 306 IGWGRQ---IRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           +G G +   IR+Y   P   + D R  +     + V+ GDLD+ ++A  A ++
Sbjct: 59  VGSGERAEKIRTYNY-PQNRITDHRIKLTINKLNTVILGDLDEIIEALQADER 110


>gi|225714246|gb|ACO12969.1| Peptide chain release factor 1 [Lepeophtheirus salmonis]
          Length = 352

 Score = 98.7 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 79/330 (23%), Positives = 134/330 (40%), Gaps = 36/330 (10%)

Query: 33  PHLWQNVI--EAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSD 90
           P     +   E+  L  E +  +   S I  +Q  L +   L  +A EE D         
Sbjct: 24  PEFINYIKDIESSPLRHENKLFNVLRSDIYALQTGLQEIEALKSMAQEEKDFEKEVLEDL 83

Query: 91  NLQRIKLEVEYKQFES---LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEK 147
           +    +++    +  +   + +   D ++A LEV  GAGG E+  +A  +  +Y  +   
Sbjct: 84  SKLEPQVDELVTRLANNILISNQRYDQDNAVLEVLPGAGGLEASVFAAEVFNLYCSYCRD 143

Query: 148 RKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
                  ++ H           +        G                   + R  TS  
Sbjct: 144 YLGYNVEVQEHVETTGASDYFAISKASILIKG-----------------SKSDRLQTSTR 186

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           S+ V P++ D   I+++ SD  +   R+SG GGQ VNTT+SAVR+ H PT +   CQ+ R
Sbjct: 187 SLSVLPLLTDFSRIDVNPSDLSVTYCRSSGPGGQGVNTTNSAVRMIHNPTKISAHCQELR 246

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIG---WGRQIRSYVLQPYQMVK 324
           + H+N   A   L+ +LY +  +K  E + +  + K++IG      +IR+Y       V 
Sbjct: 247 TAHENYGLALEKLKRELYRVMFEK--ENSKVSSTRKSQIGQMNRNEKIRTYHYG-RNTVL 303

Query: 325 DLRTN---IEKTSPSDVLDGD-----LDDF 346
           D R      +  +  D + G+     LD F
Sbjct: 304 DHRIQGVVKQVPNLFDFMKGEYGFTILDQF 333


>gi|124808906|ref|XP_001348439.1| peptide chain release factor 1, putative [Plasmodium falciparum
           3D7]
 gi|23497333|gb|AAN36878.1|AE014820_28 peptide chain release factor 1, putative [Plasmodium falciparum
           3D7]
          Length = 304

 Score = 98.7 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 70/245 (28%), Positives = 112/245 (45%), Gaps = 17/245 (6%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
             + N   +E   G GG E+  W+  LL  Y  +AE+ K K E ++             L
Sbjct: 60  NDNKNFIRIEFRPGVGGEEAFTWSKELLNTYKLFAERNKCKVEKIQDISDSLVISSKENL 119

Query: 171 LIKGP------NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
            I         N Y   K E G+H++ RI   DS +R H+S +++ ++    +  + EI+
Sbjct: 120 RIIKEDKQIEINLYDLFKNESGIHQVKRIPKNDSKNRIHSSTATVAIFFHKKEEPKYEIN 179

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
             D +I T+R+S  GGQ+VN  +S V I H PTG+  +CQ+ER+Q  NK  A   L  K+
Sbjct: 180 LKDLKISTFRSSKPGGQNVNKIESGVCILHKPTGIQTECQEERTQELNKKLAMKRLIQKI 239

Query: 285 YELELQKREEIANIGESSK-TEIGWGRQIRSYVLQPYQMVKDLRTN--------IEKTSP 335
             +E +++E +     +    E     +IR+Y       + D   N         EK   
Sbjct: 240 QHMESKEKENMVQHERAKLIKESNRSNRIRTYNFF-RGYITDH-INKKKIDLIYFEKGKL 297

Query: 336 SDVLD 340
             +L+
Sbjct: 298 EYILN 302


>gi|10092253|gb|AAG12666.1|AC027033_1 peptide chain release factor, putative; 62597-62246 [Arabidopsis
           thaliana]
          Length = 88

 Score = 98.7 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/81 (48%), Positives = 52/81 (64%)

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNI 330
            NKA A  +L++ L +LE+ ++  +      S TEI WG QIR+YVL  Y+MVKDLRTN 
Sbjct: 1   MNKASAMAVLQSWLDQLEMARQTSVNAQHTRSLTEISWGNQIRTYVLHQYRMVKDLRTNY 60

Query: 331 EKTSPSDVLDGDLDDFMKATL 351
           E + P  VL+GDLD F+   L
Sbjct: 61  EVSDPDSVLEGDLDGFISKLL 81


>gi|116248645|gb|ABJ90461.1| peptide chain release factor 1 [Pseudoalteromonas haloplanktis]
          Length = 158

 Score = 98.7 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 77/158 (48%), Positives = 108/158 (68%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY+R+AE +K+K E +  ++GE  G K     I G   YG LK E GVHR+ R+   +S 
Sbjct: 1   MYSRYAEDKKWKVEVVSTNEGEHGGYKEVIANISGEGVYGQLKFESGVHRVQRVPETESQ 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS  ++ V   V ++  I+I+ +D ++DT+RASGAGGQHVN TDSA+R+THIPTGV
Sbjct: 61  GRVHTSACTVAVMAEVPEAEAIQINTADLKVDTFRASGAGGQHVNKTDSAIRLTHIPTGV 120

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
           VV+CQ +RSQHKN+A+A ++L A+L + E +KR     
Sbjct: 121 VVECQDQRSQHKNRAKAMSVLAARLQQAEDEKRHAAEA 158


>gi|124511698|ref|XP_001348982.1| peptide chain release factor, putative [Plasmodium falciparum 3D7]
 gi|23498750|emb|CAD50820.1| peptide chain release factor, putative [Plasmodium falciparum 3D7]
          Length = 352

 Score = 98.0 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 50/137 (36%), Positives = 75/137 (54%), Gaps = 2/137 (1%)

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
              +  I++SD  I T R+ G GGQ+VN  ++AVRI H PT + V+   ER+Q  NK  A
Sbjct: 215 KMNDFVINKSDLVIQTMRSGGKGGQNVNKVETAVRILHKPTNISVKASSERTQLLNKRNA 274

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
              +  KL  L+ +   +      ++K+   +G QIR+YVL   +M+KD RTN+  T   
Sbjct: 275 LKRIYEKLLYLQTE-ALKNKKYELANKSLTHFGEQIRNYVLYGNKMIKDTRTNVFSTDID 333

Query: 337 DVL-DGDLDDFMKATLA 352
            VL  G++D F+ A   
Sbjct: 334 KVLYQGEIDIFIDAYQK 350


>gi|294894730|ref|XP_002774927.1| peptide chain release factor 1, putative [Perkinsus marinus ATCC
           50983]
 gi|239880702|gb|EER06743.1| peptide chain release factor 1, putative [Perkinsus marinus ATCC
           50983]
          Length = 272

 Score = 97.6 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 66/259 (25%), Positives = 110/259 (42%), Gaps = 21/259 (8%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
             +   D++D  +E+  G GG E+  W   +  M  R+A    +    +++ +       
Sbjct: 11  WHAYVKDASDCTVEIRPGVGGVEAGKWCKDIFDMLERFAGIMGWAAPEVKVMEQG----- 65

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS---IEIEI 223
                      +G+LK E G+HR+ R+  + ++S   TS  S+ V P  D +   I +  
Sbjct: 66  --VKRTPEKGIFGYLKFEAGIHRVQRVPSWPADSLPQTSACSVVVLPREDPNSNLIPVLK 123

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
                   T ++SG GGQ VN    AVRI HI +GV       R+   NKA A   +  K
Sbjct: 124 PHEYKVWITKKSSGPGGQCVNAAHQAVRIRHIESGVEGFADCYRALKSNKALALQQVSQK 183

Query: 284 LYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLR---TNIEKTSPSD 337
           + E + +K  +   I    K  +G G    +IRSY       V D R   +     +  +
Sbjct: 184 IMEEKGKKIAKERGII--RKQHMGSGDRSEKIRSYNYL-NGTVVDHRLPKSEDGPNALEE 240

Query: 338 VLDGD--LDDFMKATLAIK 354
           ++DG+  L D ++     +
Sbjct: 241 IMDGEGLLHDIIEPLRLQE 259


>gi|149003371|ref|ZP_01828260.1| peptide chain release factor 2 [Streptococcus pneumoniae SP14-BS69]
 gi|147758554|gb|EDK65552.1| peptide chain release factor 2 [Streptococcus pneumoniae SP14-BS69]
          Length = 165

 Score = 97.2 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 65/165 (39%), Positives = 90/165 (54%), Gaps = 2/165 (1%)

Query: 27  NTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
             K  +P  W + I A+   +E   L N  +   ++++   +  ILL+   E++      
Sbjct: 2   ENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHDEL 61

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
                       +   +   LLS   D N+A LE+H G+GGTE+QDW +MLLRMYTR+  
Sbjct: 62  VAQLAELD--KIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGN 119

Query: 147 KRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            + FK E L+   G+EAGIKS TL  +GPNAYG LK E GVHRLV
Sbjct: 120 AKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLV 164


>gi|222872913|gb|EEF10044.1| predicted protein [Populus trichocarpa]
          Length = 245

 Score = 97.2 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 45/83 (54%), Positives = 57/83 (68%), Gaps = 1/83 (1%)

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           +PTG+VVQCQ  RSQH N+  AW  LR+KLYE E+QKR       E +KT++GWG QIRS
Sbjct: 1   MPTGIVVQCQDGRSQHSNRDVAWQRLRSKLYEHEMQKRMVEQQKLEDTKTDVGWGHQIRS 60

Query: 315 YVLQPYQMVKDLRTNIEKTSPSD 337
           YVL     +KDLRTN+E ++   
Sbjct: 61  YVLD-NSRIKDLRTNVEISATQK 82


>gi|221060184|ref|XP_002260737.1| Peptide chain release factor [Plasmodium knowlesi strain H]
 gi|193810811|emb|CAQ42709.1| Peptide chain release factor, putative [Plasmodium knowlesi strain
           H]
          Length = 263

 Score = 96.4 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 8/240 (3%)

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
             +  V             + N   +E   G GG E+  W+  LL  Y  +AE+   + E
Sbjct: 1   MRRSSVLNLHVRKEDPSVQNKNCVRIEFRPGVGGEEAFLWSTELLNTYKAFAERINCRVE 60

Query: 154 ALE------IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
            +       +         +          Y  LK E G+H++ R+   +S  + H+S +
Sbjct: 61  RVHDASESLLVVSPSDVCITQEGYEIKTTLYDLLKNESGIHQVKRVPRNESKGKIHSSTA 120

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           +I V+   D+  + EI+  D RI T+R+S  GGQ+VN  +S V I H PTG+  +CQ+ER
Sbjct: 121 TIAVFLHEDEQKKDEINLKDLRITTFRSSKPGGQNVNKIESGVSILHKPTGIKTECQEER 180

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQIRSYVLQPYQMVKDL 326
           +Q  NK  A   L  K+ +   ++ EE      +    +     +IR+Y       + D 
Sbjct: 181 TQEMNKKIAMKRLIQKVLQFRHKQSEEELRGERAKLIKDSSRSSRIRTYNFF-RGYITDH 239


>gi|119513510|ref|ZP_01632531.1| peptide chain release factor 2 [Nodularia spumigena CCY9414]
 gi|119461826|gb|EAW42842.1| peptide chain release factor 2 [Nodularia spumigena CCY9414]
          Length = 66

 Score = 96.4 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 32/57 (56%), Positives = 39/57 (68%)

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
                  E  WG QIR+YV  PYQMVKDLRTN+E T+ SDV+DGDLD F++A L  +
Sbjct: 1   EIRGDMVEASWGNQIRNYVFHPYQMVKDLRTNVETTAISDVMDGDLDSFIQAYLRQE 57


>gi|332213667|ref|XP_003255946.1| PREDICTED: peptide chain release factor 1-like, mitochondrial
           isoform 2 [Nomascus leucogenys]
          Length = 271

 Score = 95.6 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 76/208 (36%), Positives = 105/208 (50%), Gaps = 1/208 (0%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            L   I  + E +  L +   LL    E+       E +   + I           + S 
Sbjct: 63  ELLAVIKLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+ 
Sbjct: 123 ETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASA 182

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P     I + I+  D RI
Sbjct: 183 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILP-QPTEINLVINPKDLRI 241

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTG 258
           DT RASGAGGQHVNTTDSAVRI H+PT 
Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTD 269


>gi|156101992|ref|XP_001616689.1| peptide chain release factor 1 [Plasmodium vivax SaI-1]
 gi|148805563|gb|EDL46962.1| peptide chain release factor 1, putative [Plasmodium vivax]
          Length = 263

 Score = 95.6 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 64/240 (26%), Positives = 107/240 (44%), Gaps = 8/240 (3%)

Query: 94  RIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTE 153
             +  V +   +       + N   +E   G GG E+  W+  LL  Y  +AE+   + E
Sbjct: 1   MRRRRVLHLHVKKEDPSVKNKNCIRIEFRPGVGGEEALLWSRELLNTYKTFAERMNCRVE 60

Query: 154 ALE------IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFS 207
            +       +         +        + Y   K E G+H++ R+   +S  + H+S +
Sbjct: 61  RVHDAGESLVVTSPSDVCIAKQGQEIKASLYDLFKNESGIHQVKRVPRNESKGKIHSSTA 120

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
           +I V+   D+  + E++  D RI T+R+S  GGQ+VN  +S V I H PTG+  +CQ+ER
Sbjct: 121 TIAVFLHTDEHRKDEVNLKDLRIKTFRSSKPGGQNVNKIESGVSILHKPTGMQTECQEER 180

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESS-KTEIGWGRQIRSYVLQPYQMVKDL 326
           +Q  NK  A   L  K+  L  ++ EE      S    +    R+IR+Y       + D 
Sbjct: 181 TQEMNKKIALKRLTEKISHLRHKQSEEQLRRERSKLVKDSSRSRRIRTYNFF-RGYITDH 239


>gi|119568099|gb|EAW47714.1| mitochondrial translational release factor 1-like, isoform CRA_c
           [Homo sapiens]
          Length = 271

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 76/208 (36%), Positives = 105/208 (50%), Gaps = 1/208 (0%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            L   I  + E +  L +   LL    E+       E +   + I           + S 
Sbjct: 63  ELLAVIKLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+ 
Sbjct: 123 ETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASA 182

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P     I + I+  D RI
Sbjct: 183 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILP-QPTEINLVINPKDLRI 241

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTG 258
           DT RASGAGGQHVNTTDSAVRI H+PT 
Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTD 269


>gi|332825293|ref|XP_003311599.1| PREDICTED: mitochondrial translational release factor 1-like [Pan
           troglodytes]
          Length = 281

 Score = 95.3 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 77/208 (37%), Positives = 106/208 (50%), Gaps = 1/208 (0%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            L   I  + E +  L +   LL    E+       E +   + I           + S 
Sbjct: 63  ELLAVIRLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+ 
Sbjct: 123 ETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASA 182

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P     I + I+  D RI
Sbjct: 183 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILP-QPTEINLVINPKDLRI 241

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTG 258
           DT RASGAGGQHVNTTDSAVRI H+PTG
Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTG 269


>gi|325067255|ref|ZP_08125928.1| peptide chain release factor 1 [Actinomyces oris K20]
          Length = 397

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 79/179 (44%), Positives = 105/179 (58%), Gaps = 7/179 (3%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           +     DS D  +EV AG GG ES  +A+ L RMY+R+AE++ +  E L+  D +  G K
Sbjct: 206 VPRDPDDSRDVIIEVKAGEGGEESALFASDLARMYSRYAERQGWAVEVLDATDSDLGGYK 265

Query: 167 SATLLI-------KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI 219
              L I            +  LK E GVHR+ R+   +S  R HTS + + V P  DD  
Sbjct: 266 DVRLAIKARGPVEPQDGVWAHLKYEGGVHRVQRVPVTESQGRIHTSAAGVLVMPEADDPG 325

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           E++I  +D RID +R+SG GGQ VNTTDSAVRITH+PTG+VV  Q E+SQ +NK  A  
Sbjct: 326 ELQIDAADLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSMQNEKSQLQNKEAAMR 384


>gi|302823050|ref|XP_002993180.1| hypothetical protein SELMODRAFT_431302 [Selaginella moellendorffii]
 gi|300139071|gb|EFJ05820.1| hypothetical protein SELMODRAFT_431302 [Selaginella moellendorffii]
          Length = 221

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/94 (32%), Positives = 56/94 (59%), Gaps = 4/94 (4%)

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVK 324
           +ERSQ +NK +A  +L++KL  +  +++            +  WG++IR+YV  PY++V 
Sbjct: 18  KERSQLENKIKAIALLKSKLLVILEEQKAAEIKEIRGDVVKAEWGQEIRNYVFHPYRLVH 77

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKAT----LAIK 354
           DLRTN+E +  S ++DG+++  + A     LA +
Sbjct: 78  DLRTNVETSDISGIMDGNVEPLLTAYLISSLAWR 111


>gi|221054928|ref|XP_002258603.1| peptide release factor [Plasmodium knowlesi strain H]
 gi|193808672|emb|CAQ39375.1| peptide release factor, putative [Plasmodium knowlesi strain H]
          Length = 407

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 70/334 (20%), Positives = 140/334 (41%), Gaps = 20/334 (5%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---FIKEIQDRLCDNLILLE 74
             + ++   +   +   L  ++     L +E   +D  ++    I+E++     +     
Sbjct: 54  QKITKIQERSKILK--TLHDDLDVYTELFQESGFIDGGLNPDKTIQEVKSSSLMDTDDDI 111

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             L      +       +      V   +         D+ +  +E+  G GG E++ + 
Sbjct: 112 KELLRTIEDVGSLLLQEVVDFYKSVVNTE------HHLDTEEVKVEITPGVGGLEAKLFC 165

Query: 135 NMLLRMYTRWAEKRKFKTEALE-IHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           N L  MY ++ +++ F+   ++   +  + G +S   +IKG   Y     E G+HR+ RI
Sbjct: 166 NDLFSMYEQFCKEKNFQCNLIKGESEDTKDGYRSIVAIIKGERVYEHFVQENGIHRVQRI 225

Query: 194 SPYDSNSRRHTSFSSIWVYP----VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
               ++ +  TS S ++V            ++   ++D  I+T R+ GAGGQ VN  ++ 
Sbjct: 226 P--VNSKKIQTSTSVVFVSDEESLKKKIQKKMNFGKNDLLIETKRSGGAGGQSVNKNETC 283

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE-LELQKREEIANIGESSKTEIGW 308
           V+I H PT + V+ Q+  SQ +N++ A   L+ KL+     Q+++      +S K     
Sbjct: 284 VKILHKPTNLSVEVQKTSSQIQNRSMAIQALKNKLFSFYYQQEKDLYFKYKKSHKMSGDR 343

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGD 342
             +IR+Y       + D   N++         GD
Sbjct: 344 SEKIRTYNFV-GNFITDHLRNVQYPGIDLFFRGD 376


>gi|166795305|ref|NP_001107656.1| peptide chain release factor 1-like, mitochondrial isoform b [Homo
           sapiens]
 gi|15680165|gb|AAH14428.1| MTRF1L protein [Homo sapiens]
 gi|56203459|emb|CAI18898.1| mitochondrial translational release factor 1-like [Homo sapiens]
 gi|193787809|dbj|BAG53012.1| unnamed protein product [Homo sapiens]
          Length = 271

 Score = 94.9 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 76/208 (36%), Positives = 105/208 (50%), Gaps = 1/208 (0%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            L   I  + E +  L +   LL    E+       E +   + I           + S 
Sbjct: 63  ELLAVIKLLNEKERELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+ 
Sbjct: 123 ETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASA 182

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P     I + I+  D RI
Sbjct: 183 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILP-QPTEINLVINPKDLRI 241

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTG 258
           DT RASGAGGQHVNTTDSAVRI H+PT 
Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTD 269


>gi|114609871|ref|XP_001140771.1| PREDICTED: mitochondrial translational release factor 1-like
           isoform 5 [Pan troglodytes]
          Length = 271

 Score = 94.5 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 76/208 (36%), Positives = 105/208 (50%), Gaps = 1/208 (0%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            L   I  + E +  L +   LL    E+       E +   + I           + S 
Sbjct: 63  ELLAVIRLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D ND  LEV AG GG E+  + + +  MY ++A  +++  E LE    E  G++ A+ 
Sbjct: 123 ETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASA 182

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P     I + I+  D RI
Sbjct: 183 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILP-QPTEINLVINPKDLRI 241

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTG 258
           DT RASGAGGQHVNTTDSAVRI H+PT 
Sbjct: 242 DTKRASGAGGQHVNTTDSAVRIVHLPTD 269


>gi|226510582|ref|NP_001146175.1| hypothetical protein LOC100279745 [Zea mays]
 gi|219886065|gb|ACL53407.1| unknown [Zea mays]
          Length = 184

 Score = 93.7 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 59/167 (35%), Positives = 103/167 (61%), Gaps = 3/167 (1%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           MY R+ E+  +K + +   + E  G K+  + +KG   Y  LK E GVHR+ R+   ++ 
Sbjct: 1   MYQRYCERNNWKFKPVSCSEAEMGGYKTYVMEVKGKQVYSKLKFESGVHRVQRVPLTEAM 60

Query: 200 SRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            R HTS +++ + P   D +++ I   D  + T R+ GAGGQ+VN  ++AV + H PTG+
Sbjct: 61  GRVHTSTATVAIMP-EADEVDVVIDPKDIELKTARSGGAGGQNVNKVETAVDLIHKPTGI 119

Query: 260 VVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
            + C +ERSQ +N+ +A+ +LRAKLYE++L++++E  ++    K ++
Sbjct: 120 RIFCTEERSQLQNRERAFQLLRAKLYEIKLREQQE--SLRNQRKLQV 164


>gi|302781616|ref|XP_002972582.1| hypothetical protein SELMODRAFT_97037 [Selaginella moellendorffii]
 gi|300160049|gb|EFJ26668.1| hypothetical protein SELMODRAFT_97037 [Selaginella moellendorffii]
          Length = 163

 Score = 93.3 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 61/144 (42%), Positives = 88/144 (61%), Gaps = 13/144 (9%)

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R HTS +S+ + P   + ++++I   + +IDTYRA GA GQHVNTT SAVR+TH+PTG+V
Sbjct: 1   RIHTSTASVAILP-EVNEVDVDIRNDEIKIDTYRAGGADGQHVNTTCSAVRVTHVPTGIV 59

Query: 261 VQCQQERSQH------KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ--- 311
           V  Q ERS+H      +NKA+A ++L A+LYELE  +    A+  E  + +IG   +   
Sbjct: 60  VAIQDERSRHKEGPSARNKAKALSILYARLYELERSR--AAASRSELQQDQIGSSDRSES 117

Query: 312 IRSYVLQPYQMVKDLRTNIEKTSP 335
           IR+Y   P   V D R  + + S 
Sbjct: 118 IRTYNF-PQDRVTDHRVGVTQHSI 140


>gi|82538743|ref|XP_723804.1| peptide chain release factor 1 [Plasmodium yoelii yoelii str.
           17XNL]
 gi|23478225|gb|EAA15369.1| peptide chain release factor 1 [Plasmodium yoelii yoelii]
          Length = 358

 Score = 93.3 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 68/306 (22%), Positives = 130/306 (42%), Gaps = 7/306 (2%)

Query: 41  EAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVE 100
           +   +    + L  A   +   +  L +N+ L  L  +E+   I     ++   +K  + 
Sbjct: 24  KITKIQNMSKQLKIAWEELDIYKQLLTENMKL-TLRKDEESKKIDTINFNDYSEVKEIIY 82

Query: 101 YKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE--IH 158
             +       +   +     +  G GG E++ +AN L  MY  + + + ++       + 
Sbjct: 83  NLENICDSIVKQLLDIYTNFIVPGVGGQEAKMFANELFSMYEHFCKLKNYECLIKNNKLI 142

Query: 159 DGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD- 217
           +  +   K+    IKG   Y     E G+HR+ RI       +  TS   ++      + 
Sbjct: 143 EEGKGIYKNIVADIKGEGVYIDFIQEIGIHRVQRIPINSKKMQTSTSIVLLFDEKQTKEK 202

Query: 218 -SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
              +++I +++  I+T R+ GAGGQ VN  ++ V+I H PT + V+ Q+  SQ +NK+ A
Sbjct: 203 LEKKMKIPKNEFLIETKRSGGAGGQSVNKNETCVKIIHKPTNIFVEVQKTSSQIQNKSIA 262

Query: 277 WNMLRAKLYE-LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
             M++ KLY     Q++       ++ K       +IR+Y    +  V D   N++ T  
Sbjct: 263 MEMIKNKLYNFYYEQEKINFLKDKKNQKQNGDRSEKIRTYNFS-HNTVIDHIANVQYTGI 321

Query: 336 SDVLDG 341
                G
Sbjct: 322 DQFFKG 327


>gi|213616409|ref|ZP_03372235.1| hypothetical protein SentesTyp_18844 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 65

 Score = 92.9 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 290 QKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKA 349
           QK+       E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A
Sbjct: 1   QKKNAEKQAMEDTKSDIGWGSQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEA 59

Query: 350 TLAI 353
           +L  
Sbjct: 60  SLKA 63


>gi|71900159|ref|ZP_00682300.1| PCRF [Xylella fastidiosa Ann-1]
 gi|71730108|gb|EAO32198.1| PCRF [Xylella fastidiosa Ann-1]
          Length = 270

 Score = 92.6 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 1/168 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   L     DP +  +    +   RE   L    + + E      D      L
Sbjct: 9   LEALAERHEELERLLSDPKIASDTDRFRTYSRELAQLAPIATTLAEETRTKADLAAAETL 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYK-QFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + ++     Q     ++ + Q   +     D  + +LEV AG GG E+  +A
Sbjct: 69  RTDPEMRELAEQEIAIAQAHLTTLDEQLQRLLIPQDPRDECNLFLEVRAGTGGDEAAIFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
             L RMYTR+AE++++K E      GE  G K     I G  AY  LK
Sbjct: 129 GNLFRMYTRYAERQRWKVEVESDTPGEHGGYKEIIARIVGRGAYSRLK 176


>gi|221133260|ref|XP_002171178.1| PREDICTED: similar to predicted protein, partial [Hydra
           magnipapillata]
          Length = 205

 Score = 91.8 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 72/204 (35%), Positives = 121/204 (59%), Gaps = 3/204 (1%)

Query: 68  DNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFES--LLSGEADSNDAYLEVHAGA 125
           + + L  L ++  +     +   +  ++ +     +     +   + DSN+A +E+ AG 
Sbjct: 1   EIIELAALGIDNKEMKEFVQEEISACQVCIADLELRLLDSIIPKDKDDSNNAIMEIRAGT 60

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  +L MY +++   ++K E L+  +  + G+K  ++ I G   +G LK E 
Sbjct: 61  GGREAAIFAAEMLSMYDKYSSSNQWKFEVLDESESTDGGLKEVSVNIIGSGVFGKLKHEI 120

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           GVHR+ R+   +S  R HTS  ++ V P   +SI++ ++  D ++DT+R+SGAGGQHVNT
Sbjct: 121 GVHRVQRVPITESLGRVHTSTVTVAVLP-QPESIDVVLNMKDVKVDTFRSSGAGGQHVNT 179

Query: 246 TDSAVRITHIPTGVVVQCQQERSQ 269
           TDSAVR+THIP+G+VV  Q +RSQ
Sbjct: 180 TDSAVRLTHIPSGLVVAVQSQRSQ 203


>gi|23010857|ref|ZP_00051405.1| COG1186: Protein chain release factor B [Magnetospirillum
           magnetotacticum MS-1]
          Length = 136

 Score = 91.4 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 94/110 (85%), Positives = 104/110 (94%)

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +HRLVRISPYDSN+RRHTSF+S+WVYPV+DD IEIEI ESDCRIDTYR+SGAGGQHVNTT
Sbjct: 1   MHRLVRISPYDSNARRHTSFASVWVYPVIDDRIEIEIKESDCRIDTYRSSGAGGQHVNTT 60

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           DSAVRITH PTG+VV CQQERSQHKN+A AWNMLRA+LYELEL+KREE A
Sbjct: 61  DSAVRITHNPTGIVVACQQERSQHKNRATAWNMLRARLYELELKKREEKA 110


>gi|301344980|ref|ZP_07225721.1| peptide chain release factor 1 [Acinetobacter baumannii AB056]
 gi|301513510|ref|ZP_07238747.1| peptide chain release factor 1 [Acinetobacter baumannii AB058]
 gi|301597421|ref|ZP_07242429.1| peptide chain release factor 1 [Acinetobacter baumannii AB059]
          Length = 127

 Score = 91.4 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/112 (40%), Positives = 65/112 (58%), Gaps = 6/112 (5%)

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H+N TDSAVRITHIPTG VV+CQ+ERSQHKNKA+A  +L ++L   +       A   E 
Sbjct: 1   HINKTDSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKR--AAADAATSEM 58

Query: 302 SKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKAT 350
            +  +G G    +IR+Y   P   + D R N+       +++GDL + + + 
Sbjct: 59  RRDLVGSGDRSERIRTYNY-PQGRMTDHRINLTLYKLDAIMEGDLTELLDSL 109


>gi|253730877|ref|ZP_04865042.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253725386|gb|EES94115.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 59

 Score = 91.0 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
              E +K++IGWG QIRSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 2   KAMEGNKSDIGWGNQIRSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 57


>gi|255024491|ref|ZP_05296477.1| peptide chain release factor 1 [Listeria monocytogenes FSL J1-208]
          Length = 165

 Score = 90.6 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 64/161 (39%), Gaps = 4/161 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   LN    DP +  +    + L +E+  +   +   +E ++         EL
Sbjct: 5   LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNEQINETKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQ----FESLLSGEADSNDAYLEVHAGAGGTESQ 131
             E+ D  + +   + L  ++ E    +       +     D  +  LE+   AGG E+ 
Sbjct: 65  LGEKLDDEMREMAKEELAELQKEKADLEERLKLLLVPKDPNDDKNVILEIRGAAGGDEAA 124

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
            +A  L RMY+++AE R +K E ++ +     G K    ++
Sbjct: 125 LFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKEIIAMM 165


>gi|82540995|ref|XP_724771.1| peptide chain release factor 1 [Plasmodium yoelii yoelii str. 17XNL]
 gi|23479536|gb|EAA16336.1| peptide chain release factor 1 [Plasmodium yoelii yoelii]
          Length = 2075

 Score = 90.2 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 62/221 (28%), Positives = 111/221 (50%), Gaps = 9/221 (4%)

Query: 113  DSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
            + N   +E  +G GG E++ W+N L ++Y  +AEK+K   ++++             + I
Sbjct: 1835 NKNHVRIEFRSGIGGDEAELWSNELKKIYQNYAEKKKCTVKSVKDATNSLIIKSPNDVKI 1894

Query: 173  KGP------NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
                     + Y   K E G+H++ RI   ++  +  +S ++I V+ + D + + EI+  
Sbjct: 1895 NKEGEEIQISLYDLFKNESGIHQVKRIPKNENKEKIQSSTATIAVF-IQDYANKYEINSK 1953

Query: 227  DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
            D +I T+R+S  GGQ+VN  +SAVRI H  TG+  + Q+ER+Q  NK  A   L  K+++
Sbjct: 1954 DLKIMTFRSSKPGGQNVNKIESAVRIVHTHTGIQAESQKERTQELNKKIAMKKLTQKIHD 2013

Query: 287  LE-LQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDL 326
            L   +K + + N       +     +IR+Y       + D 
Sbjct: 2014 LRNREKEQSLQNERSKFTKDCSRSNRIRTYNFFT-GYITDH 2053


>gi|289178305|gb|ADC85551.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Bifidobacterium
           animalis subsp. lactis BB-12]
          Length = 115

 Score = 89.9 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 6/106 (5%)

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---GW 308
           +THIPTG+VV  Q E+SQ +N+A A  +L+++L  L ++  +E A   +   +++     
Sbjct: 1   MTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRL--LAMKHEQEAAEAADMRHSQVRSLDR 58

Query: 309 GRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
             +IR+Y   P   + D RTN +  +   VLDGDL   + + +   
Sbjct: 59  SERIRTYNF-PENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQAD 103


>gi|239982309|ref|ZP_04704833.1| peptide chain release factor 1 [Streptomyces albus J1074]
          Length = 241

 Score = 89.1 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 64/219 (29%), Gaps = 4/219 (1%)

Query: 12  GLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            +F+  +  +   + +  +  DP +  +   A+ L +    L   +   +  +    D  
Sbjct: 18  KMFEAVEELIGEHADIEKRLADPAVHADQAGARKLNKRYAELTPIVGTYRSWKQTGEDIE 77

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
              EL    DD     E  +     +   E  +   +    +D  D  LE+ AGAGG ES
Sbjct: 78  TAREL--AADDPDFAAEVKELEAAREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDES 135

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +A  LLR   RW                   G +SA      P      +      R 
Sbjct: 136 ALFAGDLLRPPRRW-RGDGGAHRPAARPRRPGPGCRSAAGSPAAPRTPPARRPWPASSRR 194

Query: 191 VRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
              +      R        W +P          S     
Sbjct: 195 PWRASAPVRRRPRPRRYGPWRWPGASAWRPPARSWPGRP 233


>gi|291454153|ref|ZP_06593543.1| peptide chain release factor 1 [Streptomyces albus J1074]
 gi|291357102|gb|EFE84004.1| peptide chain release factor 1 [Streptomyces albus J1074]
          Length = 223

 Score = 88.7 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 64/218 (29%), Gaps = 4/218 (1%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +  +   + +  +  DP +  +   A+ L +    L   +   +  +    D   
Sbjct: 1   MFEAVEELIGEHADIEKRLADPAVHADQAGARKLNKRYAELTPIVGTYRSWKQTGEDIET 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EL    DD     E  +     +   E  +   +    +D  D  LE+ AGAGG ES 
Sbjct: 61  AREL--AADDPDFAAEVKELEAAREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESA 118

Query: 132 DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
            +A  LLR   RW                   G +SA      P      +      R  
Sbjct: 119 LFAGDLLRPPRRW-RGDGGAHRPAARPRRPGPGCRSAAGSPAAPRTPPARRPWPASSRRP 177

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
             +      R        W +P          S     
Sbjct: 178 WRASAPVRRRPRPRRYGPWRWPGASAWRPPARSWPGRP 215


>gi|195351215|ref|XP_002042131.1| GM10257 [Drosophila sechellia]
 gi|194123955|gb|EDW45998.1| GM10257 [Drosophila sechellia]
          Length = 166

 Score = 88.7 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 51/141 (36%), Positives = 75/141 (53%), Gaps = 5/141 (3%)

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
                I++ I+E D +I+T RASGAGGQHVNTTDSAVRI H+PTG+ V+ Q ERSQ KN+
Sbjct: 1   PRPADIQVHIAEKDLKIETKRASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNR 60

Query: 274 AQAWNMLRAKLYELELQKREE-IANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRT-NIE 331
             A   LR++L + +L+  E       ++ +  +    +IR+Y       + D R     
Sbjct: 61  ELAMKRLRSRLVQQQLESVEASKMATKKAQQGSLNRNEKIRTYNFV-QDRITDHRIQGGT 119

Query: 332 KTSPSDVLDG--DLDDFMKAT 350
             +    L G   L   ++  
Sbjct: 120 LHNLDGFLKGGDQLSGLIEKL 140


>gi|261885046|ref|ZP_06009085.1| peptide chain release factor 2 [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 83

 Score = 88.3 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/79 (45%), Positives = 50/79 (63%), Gaps = 2/79 (2%)

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPS 336
              L+++LYE EL K++E  N  E  K+EIGWG QIRSYVL PYQ VKD R+    +   
Sbjct: 1   MKWLKSRLYEFELMKQQEANNAIE--KSEIGWGHQIRSYVLFPYQQVKDTRSGEAYSQTD 58

Query: 337 DVLDGDLDDFMKATLAIKK 355
            +LDGD+   +++ L  +K
Sbjct: 59  AILDGDIKKIIESVLISQK 77


>gi|323333643|gb|EGA75036.1| Mrf1p [Saccharomyces cerevisiae AWRI796]
          Length = 311

 Score = 87.9 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 71/250 (28%), Positives = 109/250 (43%), Gaps = 15/250 (6%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +     L  L+       +  +V +     +    L        E +++L +   L E+ 
Sbjct: 58  EKYEAELKDLDKDLSC-GIHFDVNK----QKHYAKLSALTDTFIEYKEKLNELKSLQEMI 112

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQF--ESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           + +       E        + E    +   + L         + LE+  G GG E+  + 
Sbjct: 113 VSDPSLRAEAEQEYAELVPQYETTSSRLVNKLLPPHPFADKPSLLELRPGVGGIEAMIFT 172

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
             LL MY  +A  RK+K   +  ++ E   GI  A L I+   +Y  L+ E GVHR+ RI
Sbjct: 173 QNLLDMYIGYANYRKWKYRIISKNENESGSGIIDAILSIEEAGSYDRLRFEAGVHRVQRI 232

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSI-------EIEISESDCRIDTYRASGAGGQHVNTT 246
              ++  R HTS +++ V P + D         E      + R+D  RASG GGQHVNTT
Sbjct: 233 PSTETKGRTHTSTAAVVVLPQIGDESAKSIDAYERTFKPGEIRVDIMRASGKGGQHVNTT 292

Query: 247 DSAVRITHIP 256
           DSAVR+THIP
Sbjct: 293 DSAVRLTHIP 302


>gi|70951470|ref|XP_744973.1| peptide chain release factor 1 [Plasmodium chabaudi chabaudi]
 gi|56525140|emb|CAH78733.1| peptide chain release factor 1, putative [Plasmodium chabaudi
           chabaudi]
          Length = 260

 Score = 87.6 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 66/223 (29%), Positives = 112/223 (50%), Gaps = 9/223 (4%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
             + N   +E   G GG E++ W+N L + Y  +AEK+K   ++++             +
Sbjct: 18  NKNKNHIRIEFRPGIGGDEAELWSNELKKTYQNYAEKKKCSVKSVKDITNSIIIKSPTDV 77

Query: 171 LIKGP------NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
            I         + Y   K E G H++ RI   +S  + H+S ++I ++ + DD+ + EI+
Sbjct: 78  QINKDGEEIQISLYDLFKNESGTHQVKRIPKNESKDKIHSSTATIAIF-IQDDADKYEIN 136

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
             D +I T+R+S  GGQ+VN  +S VRI HIPTG+  + Q+ER+Q  NK  A   L  K+
Sbjct: 137 SKDLKIMTFRSSKPGGQNVNKIESGVRIVHIPTGIQTESQEERTQELNKRIAMKKLTQKI 196

Query: 285 YELELQKREEIANIGESS-KTEIGWGRQIRSYVLQPYQMVKDL 326
           ++L  +++EE      S    +     +IR+Y       + D 
Sbjct: 197 HDLRSREKEEELQNERSKLVKKCHRSSRIRTYNFFT-GYITDH 238


>gi|194699680|gb|ACF83924.1| unknown [Zea mays]
          Length = 174

 Score = 87.2 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 83/172 (48%), Positives = 115/172 (66%), Gaps = 1/172 (0%)

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
            LLSG  D   A + + AGAGGT++QDWA+MLLRMY RW EK+++KT  +E   GEEAGI
Sbjct: 3   QLLSGPYDKEGAVINISAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGI 62

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP-VVDDSIEIEIS 224
           KSAT+ ++G  AYG+L GE+G HR+VR SP+++   R TSF+ + V P + ++S+ ++I 
Sbjct: 63  KSATVELEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESMAVDIP 122

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
           E D  I   RA G GGQ+VN  ++AVR+ HIPTG+ V+C    S        
Sbjct: 123 EEDLEISFTRAGGKGGQNVNKVETAVRMVHIPTGIAVRCSGIISHQFAFVLC 174


>gi|332878808|ref|ZP_08446523.1| putative peptide chain release factor H [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332683159|gb|EGJ56041.1| putative peptide chain release factor H [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 235

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 4/204 (1%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLI 172
             +  +++ AG G  E Q     +L+++ + A ++      +   +G+    IKS T+ +
Sbjct: 1   MEEKIIQITAGRGPLECQWVVAKVLKVFLQEATQKGIDYTIVSREEGDANLTIKSVTVQL 60

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG     +LK   G    V  S +    +R   +  ++    +D       SE D +  T
Sbjct: 61  KGKELSAFLKSWLGTVCWVGKSTFRKFHQRSNWYIGVF---ELDQLQRQSFSERDVQFQT 117

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ G GGQ+VN  +SAVR TH+PTGV V  Q  RSQ  NK  A N LR KL E+ELQ+ 
Sbjct: 118 TRSQGNGGQNVNKVNSAVRATHLPTGVSVFAQDSRSQLDNKKLALNRLREKLAEIELQQL 177

Query: 293 EEIANIGESSKTEIGWGRQIRSYV 316
            E A    ++ T++  G  +R++ 
Sbjct: 178 AEQAQNHWNNHTQVQRGNPVRTFN 201


>gi|241205972|ref|YP_002977068.1| peptide chain release factor H [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240859862|gb|ACS57529.1| peptide chain release factor H [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 204

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 65/197 (32%), Positives = 93/197 (47%)

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGW 180
           + AG G  E +     LL +  R A +     E       ++ G KSA + + G  A   
Sbjct: 8   ITAGNGPVECRMALAALLGILEREAVRLGCSFETNLGPMPDQHGAKSAIVSLNGFEAEQI 67

Query: 181 LKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGG 240
                G  R    S      +R   + S+       +  E+ I  +D R +T RA G GG
Sbjct: 68  ANDYCGTIRFTFKSQVRPGHKRQNWYVSVQRIDTKPEGGEVTIDPADLRFETLRAGGPGG 127

Query: 241 QHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           QH NTTDSAVR+ H PTG+V   + ERSQH+NKA A   L A L  LE++K+E   +   
Sbjct: 128 QHQNTTDSAVRVLHRPTGLVATARDERSQHRNKALALRRLEAMLRHLEVEKQEAAKSGRF 187

Query: 301 SSKTEIGWGRQIRSYVL 317
            +   I  G +++S+ L
Sbjct: 188 IANRTIERGNEVKSFKL 204


>gi|121730460|ref|ZP_01682775.1| conserved domain protein [Vibrio cholerae V52]
 gi|121627803|gb|EAX60412.1| conserved domain protein [Vibrio cholerae V52]
          Length = 156

 Score = 86.8 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 60/147 (40%), Gaps = 3/147 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LIL 72
            ++ V+R   +     DP +  +  + + L +E   L+      +  Q    D      +
Sbjct: 9   LESLVERYEEVQHLLGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEM 68

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
            +    E       E       I+   +  Q   L     D  + +LE+ AGAGG E+  
Sbjct: 69  AQEDDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGI 128

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHD 159
           +A  L RMY+R+AEK+ ++ E +   +
Sbjct: 129 FAGDLFRMYSRFAEKKGWRIEVMSSSE 155


>gi|156084766|ref|XP_001609866.1| peptide chain release factor 2 [Babesia bovis T2Bo]
 gi|154797118|gb|EDO06298.1| peptide chain release factor 2, putative [Babesia bovis]
          Length = 281

 Score = 86.4 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 77/254 (30%), Positives = 114/254 (44%), Gaps = 24/254 (9%)

Query: 80  DDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLR 139
           D        S+   ++K +        L   E D N   + + AG GGTE+ D+  ML R
Sbjct: 8   DTILCSVFLSNEHTKLKAKNASNSDLYLDLCEYDKNHCKVTITAGVGGTEAFDFCKMLGR 67

Query: 140 MYTRWAEKRKFKTEALEI----------------HDGEEAGIKSATLLIKGPNAYGWLKG 183
           MY R+ +                             G++AG +     + G  AY   KG
Sbjct: 68  MYKRFIQHYCQPESWNRELYGDLPRSLHYVDGTVVPGDKAGYRILEFEVHGDYAYKLFKG 127

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYP--------VVDDSIEIEISESDCRIDTYRA 235
           E+G HRLVR SPY++  +R T+FSS+ V P        V        ++E D  ++T R+
Sbjct: 128 EKGTHRLVRNSPYNAMRKRQTTFSSVQVVPLLSADDRDVQHYESSKHVTEKDVIVETMRS 187

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
            G GGQ+VN  ++AVRITH  TG+ V+ Q ERSQ +N+  A   +   +     ++  E 
Sbjct: 188 GGKGGQNVNKVETAVRITHKKTGLSVRVQTERSQSQNREIAMRRISEMVDAHYKEQLREK 247

Query: 296 ANIGESSKTEIGWG 309
            N     + E  WG
Sbjct: 248 CNELRGEEVEADWG 261


>gi|213583753|ref|ZP_03365579.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 166

 Score = 86.4 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 1/158 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
             + +   + QE      ++ +   +  Q   L     D  +A+LEV AG GG E+  +A
Sbjct: 69  LDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFA 128

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
             L RMY+R+AE R+++ E + + +GE  G K     I
Sbjct: 129 GDLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKI 166


>gi|207109382|ref|ZP_03243544.1| peptide chain release factor 1 [Helicobacter pylori HPKX_438_CA4C1]
          Length = 196

 Score = 83.7 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 74/204 (36%), Positives = 106/204 (51%), Gaps = 10/204 (4%)

Query: 55  AISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
            +  IKE ++ L D   L ELA EE     +Q++       +          +     D 
Sbjct: 3   VLENIKENKELLED-KELSELAKEELKILEIQKSDLETAIKQ--------LLIPKDPNDD 53

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
            + YLE+ AG GG E+  +   L + Y R+A+ +K+K E +   +    G K    LIKG
Sbjct: 54  KNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKG 113

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
              Y  LK E G HR+ R+   +S  R HTS  ++ + P   D +E+ I+ SD +I+ +R
Sbjct: 114 KGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMP-EVDDVEVSINPSDLKIEVFR 172

Query: 235 ASGAGGQHVNTTDSAVRITHIPTG 258
           A G GGQ VNTTDSAVRITH+PT 
Sbjct: 173 AGGHGGQCVNTTDSAVRITHLPTN 196


>gi|325114215|emb|CBZ49772.1| putative peptide chain release factor 1 [Neospora caninum
           Liverpool]
          Length = 489

 Score = 83.7 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 70/264 (26%), Positives = 109/264 (41%), Gaps = 33/264 (12%)

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
              ++N A +E+   AGG E+Q WA  L  MYTR+ E +K    A     G  AG KS  
Sbjct: 194 ENKNANVAIVEIRPAAGGEEAQLWATDLAEMYTRFFELQKTWRFAQLQLAGPNAGSKSPA 253

Query: 170 LLIKGPNAYGWLKGE-----------------------QGVHRLVRISPYDSNSRRHTSF 206
           L  +   A    K                           +   V          + +  
Sbjct: 254 LQRRDDAAPARRKSRAGSSRPTSKEEERNAVSGALGGVTCIAFRVEGPGVYRQLLKESGV 313

Query: 207 SSIWVYPVV--DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
             +   P     +   + + E+D  I T R+SG GGQ+VN  ++AV + H PTG+ + CQ
Sbjct: 314 HRVQRVPRTETQNFQGVALDEADLVIRTARSSGCGGQNVNKVETAVDLLHAPTGIRIFCQ 373

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQ 321
           QER+Q  NK  A  +L  KL     +  E +  + E  + ++  G    ++R+Y  +   
Sbjct: 374 QERTQAANKKAAKEILLKKLAARHEE--EVVQQMREERREQVCSGLRSERVRTYNFRD-G 430

Query: 322 MVKDLR-TNIE-KTSPSDVLDGDL 343
            V + R T  E   +   +L+G L
Sbjct: 431 RVNEHRLTGGEGLFALKPILEGQL 454


>gi|226329846|ref|ZP_03805364.1| hypothetical protein PROPEN_03758 [Proteus penneri ATCC 35198]
 gi|225200641|gb|EEG82995.1| hypothetical protein PROPEN_03758 [Proteus penneri ATCC 35198]
          Length = 90

 Score = 82.5 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 6/75 (8%)

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLRTNIEKT 333
            ++L A++   E+QKR+E        +  +G G +   IR+Y   P   V D R N+   
Sbjct: 1   MSVLGARIRAAEMQKRQE--AEASERRNLLGSGDRSDRIRTYNF-PQGRVTDHRINLTFY 57

Query: 334 SPSDVLDGDLDDFMK 348
              +V++G LD  ++
Sbjct: 58  RLDEVMEGKLDPLIQ 72


>gi|68076525|ref|XP_680182.1| peptide chain release factor 1 [Plasmodium berghei strain ANKA]
 gi|56501082|emb|CAH94168.1| peptide chain release factor 1, putative [Plasmodium berghei]
          Length = 252

 Score = 81.4 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 58/223 (26%), Positives = 107/223 (47%), Gaps = 9/223 (4%)

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
             + N   +E   G GG E++ W+  L ++Y  +A K+K K ++++             +
Sbjct: 10  NKNKNHIRIEFRPGIGGDEAELWSKELKKIYQSYANKKKLKVKSVKDITNSLIIKSPNDV 69

Query: 171 LIKGP------NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEIS 224
            I         + Y   K E G H++ RI   ++  +  +S ++I ++ + +   + EI+
Sbjct: 70  KINKDGKEIQISLYDLFKNESGTHQVKRIPKNENKEKIQSSTATIAIF-IQNYINKYEIN 128

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
             D +I T+R+S  GGQ+VN  +SAVRI H  TG+  +  +ER+Q  NK  A   L  K+
Sbjct: 129 LKDLKIMTFRSSKPGGQNVNKIESAVRIVHTHTGIQAESHEERTQELNKKIAMKRLTQKI 188

Query: 285 YELELQKREEIANIGESS-KTEIGWGRQIRSYVLQPYQMVKDL 326
           ++L+ +++EE           +     +IR+Y       + D 
Sbjct: 189 HDLQNREKEEFLQNERIKFTKDCNRSNRIRTYNFFT-GYITDH 230


>gi|156086270|ref|XP_001610544.1| peptide chain release factor 1 [Babesia bovis T2Bo]
 gi|154797797|gb|EDO06976.1| peptide chain release factor 1, putative [Babesia bovis]
          Length = 276

 Score = 81.4 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 62/257 (24%), Positives = 112/257 (43%), Gaps = 25/257 (9%)

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
             +   A +    +E+  G GGTE+  WA  L + + ++ + +K   +   I       I
Sbjct: 10  PEVPRSATNAQVVVEIRPGVGGTEANTWAQELAKAFKKFCQNKKCNVKEENIGSIIILHI 69

Query: 166 KSATLLIKGPNAYG---WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
           +      +     G       E G+H++ R+   +   R H+S +++ V P      + E
Sbjct: 70  QGDDDKFRENGCTGLEERFLREAGIHQVKRVPTSEKAGRMHSSTATVAVLPTELTKAKYE 129

Query: 223 -------ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
                  I   D    T R+SGAGGQ+VN  ++A  +TH PTG+ ++ Q+ER+Q KNK  
Sbjct: 130 DILAKIVIDPRDIEWKTCRSSGAGGQNVNKVETAAALTHKPTGIRIESQEERTQSKNKEI 189

Query: 276 AWNMLRAKLY-ELELQKREEIANIGESSKTEIG------------WGRQIRSYVLQPYQM 322
           A   L+ +L  ++E   R +  N  +     I                ++++Y    +Q+
Sbjct: 190 ALEKLKIQLAKDIESDVRHDAQNRRKEQVKAIEMNYICTQIKGSKRSERLKTYFFNTHQI 249

Query: 323 VKDLRTNIEKTSPSDVL 339
           + D R   +  + +D L
Sbjct: 250 IND-RCGCK-YNLNDFL 264


>gi|222100136|ref|YP_002534704.1| Peptide chain release factor 2 [Thermotoga neapolitana DSM 4359]
 gi|221572526|gb|ACM23338.1| Peptide chain release factor 2 [Thermotoga neapolitana DSM 4359]
          Length = 160

 Score = 81.0 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/137 (30%), Positives = 76/137 (55%), Gaps = 2/137 (1%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L ++   +  + + +   + L  L  K  DP +W +  +A+   ++ + L N    +K 
Sbjct: 14  ELEKKFKDVLSIVNEEEVNRELKELEKKLSDPSVWDDQKKAREYTQKLKRLKNISEDLKR 73

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++    D  + +EL   E+D  ++ +  + +Q ++  V+  + E +L+G+ D N+AYL V
Sbjct: 74  VRSLFEDLEVAIEL--SEEDMDMVNQVEEIVQDLEKAVKKLELEIILNGKYDPNNAYLSV 131

Query: 122 HAGAGGTESQDWANMLL 138
           H GAGGTESQDWA MLL
Sbjct: 132 HPGAGGTESQDWAQMLL 148


>gi|99034620|ref|ZP_01314576.1| hypothetical protein Wendoof_01000612 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 89

 Score = 80.6 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 7/81 (8%)

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEK 332
           A  +LRA+LYE+E QK+E   +     K++IG G    +IR+Y   P   + D R N+  
Sbjct: 1   ALKVLRARLYEIERQKKEMERSTM--RKSQIGSGDRSERIRTYNF-PQSRITDHRINLTS 57

Query: 333 TSPSDVL-DGDLDDFMKATLA 352
                ++ +G+LD+F++A ++
Sbjct: 58  HRLEQIIKEGELDEFIEALIS 78


>gi|207111206|ref|ZP_03245368.1| peptide chain release factor 2 [Helicobacter pylori HPKX_438_CA4C1]
          Length = 55

 Score = 80.6 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/52 (55%), Positives = 36/52 (69%)

Query: 303 KTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           K EIGWG QIRSYVL PYQ VKD R+NI  ++   +LDGD+D  ++  L  K
Sbjct: 3   KDEIGWGHQIRSYVLAPYQQVKDARSNIAYSNVEAILDGDIDAILEGVLIAK 54


>gi|213963016|ref|ZP_03391275.1| putative peptide chain release factor H [Capnocytophaga sputigena
           Capno]
 gi|213954357|gb|EEB65680.1| putative peptide chain release factor H [Capnocytophaga sputigena
           Capno]
          Length = 230

 Score = 80.2 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 4/202 (1%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLI 172
             +  +++ AG G  E Q     +L+ + + A +       L   +G+    +KS TL +
Sbjct: 1   MQEKIIQITAGRGPLECQWVVAKVLKTFLQEAAQAGIDYTILSREEGDANLTVKSVTLQL 60

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG     +LK   G    V  S +    +R   +  ++    +D       SE D +  T
Sbjct: 61  KGKELAPFLKTWLGTVCWVGKSTFRKFHQRSNWYIGVF---ELDQLQRQTFSERDVQFQT 117

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ G GGQ+VN  +SAVR TH+PTG+ V  Q  RSQ  NK  A   L+ KL E+ELQ+ 
Sbjct: 118 TRSQGNGGQNVNKVNSAVRATHLPTGISVLAQDSRSQLDNKKLALARLKEKLAEMELQQL 177

Query: 293 EEIANIGESSKTEIGWGRQIRS 314
            E A    ++ T++  G  +R+
Sbjct: 178 AEQAQSHWNNHTQVQRGNPVRT 199


>gi|228472445|ref|ZP_04057207.1| putative peptide chain release factor H [Capnocytophaga gingivalis
           ATCC 33624]
 gi|228276130|gb|EEK14877.1| putative peptide chain release factor H [Capnocytophaga gingivalis
           ATCC 33624]
          Length = 231

 Score = 79.8 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 4/202 (1%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLI 172
             +  +++ AG G  E Q     +L+ + + A +       L   +G+    +KS TL +
Sbjct: 1   MEEKIIQITAGRGPLECQWVVAKVLKTFLQEATQAGISYTILSREEGDANLTVKSVTLQL 60

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG     +LK   G    V  S +    +R   +  ++    +D       SE D +  T
Sbjct: 61  KGKELASFLKTWLGTVCWVGKSTFRKFHQRSNWYIGVF---ELDQLQRQLFSERDVQFQT 117

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ G GGQ+VN  +SAVR TH+PTG+ V  Q  RSQ  NK  A   L+ KL E+ELQ+ 
Sbjct: 118 TRSQGNGGQNVNKVNSAVRATHLPTGISVLAQDSRSQLDNKKLALARLKEKLAEMELQQL 177

Query: 293 EEIANIGESSKTEIGWGRQIRS 314
            E A    ++ T++  G  +R+
Sbjct: 178 AEQAQNHWNNHTQVQRGNPVRT 199


>gi|329848554|ref|ZP_08263582.1| putative peptide chain release factor H [Asticcacaulis biprosthecum
           C19]
 gi|328843617|gb|EGF93186.1| putative peptide chain release factor H [Asticcacaulis biprosthecum
           C19]
          Length = 208

 Score = 79.8 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 5/202 (2%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
             +  L + +G G  E       L + +TR   ++    + L+  +   A   S  L + 
Sbjct: 1   MTEIILHISSGKGPDECCWVVTKLAQAFTREGAEQGVTCDVLDAGEALPA---SLLLSVS 57

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G  A  +++   G  + V  SP+    +R   F  + + P        ++ ESD    T 
Sbjct: 58  GEAAPAFVRERIGTIQWVGDSPFRPLHKRRNWFVGVALAP--SPQSVPDLRESDITFSTM 115

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           RASG GGQHVN TDSAVR  H PTG+V   Q++RSQH N+  A   L   L E  ++   
Sbjct: 116 RASGPGGQHVNKTDSAVRAVHRPTGLVATAQEQRSQHANRKLATLKLALMLEERRVEAGG 175

Query: 294 EIANIGESSKTEIGWGRQIRSY 315
           +      S+   +  G  +R+Y
Sbjct: 176 QARRDQWSAHQALERGNPVRTY 197


>gi|56203457|emb|CAI18896.1| mitochondrial translational release factor 1-like [Homo sapiens]
          Length = 164

 Score = 79.8 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 68/128 (53%), Positives = 84/128 (65%), Gaps = 1/128 (0%)

Query: 162 EAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEI 221
           + G++ A+  I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P     I +
Sbjct: 38  QGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQ-PTEINL 96

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
            I+  D RIDT RASGAGGQHVNTTDSAVRI H+PTGVV +CQQERSQ KNK  A   LR
Sbjct: 97  VINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLR 156

Query: 282 AKLYELEL 289
           AKLY + L
Sbjct: 157 AKLYSMHL 164


>gi|326334366|ref|ZP_08200579.1| peptide chain release factor H [Capnocytophaga sp. oral taxon 338
           str. F0234]
 gi|325693450|gb|EGD35376.1| peptide chain release factor H [Capnocytophaga sp. oral taxon 338
           str. F0234]
          Length = 233

 Score = 79.8 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 4/202 (1%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLI 172
             +  +++ AG G  E Q     +L+++ + A +       L   +G+    +KS T+ +
Sbjct: 1   MQEKIIQITAGRGPLECQWVVAKVLKVFLQEATQAGISYTILSREEGDANLTVKSVTVQL 60

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           KG     +LK   G    V  S +    +R   +  ++    +D       SE D +  T
Sbjct: 61  KGKELAAFLKTWLGTVCWVGKSTFRKFHQRSNWYIGVF---ELDQLQRQPFSECDVQFQT 117

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+ G GGQ+VN  +SAVR TH+PTG+ V  Q  RSQ  NK  A   L+ KL E+ELQ+ 
Sbjct: 118 TRSQGNGGQNVNKVNSAVRATHLPTGISVLAQDSRSQLDNKKFALARLKEKLIEIELQQL 177

Query: 293 EEIANIGESSKTEIGWGRQIRS 314
            E A    ++ T++  G  +R+
Sbjct: 178 SEQAQSHWNNHTQVQRGNPVRT 199


>gi|194697006|gb|ACF82587.1| unknown [Zea mays]
          Length = 95

 Score = 79.5 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 7/88 (7%)

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLR 327
            NKA+A  +LRA+LYELE ++     +   S   +IG G    +IR+Y   P   V D R
Sbjct: 1   MNKAKALKVLRARLYELERRRLHMDRSKLRSE--QIGSGDRSERIRTYNF-PQGRVTDHR 57

Query: 328 TNIEKTSPSDVLDGD-LDDFMKATLAIK 354
             +   S +DV++G+ LD F+ A L  +
Sbjct: 58  VGVTHHSIADVMEGESLDMFVDALLLQE 85


>gi|218682457|ref|ZP_03530058.1| peptide chain release factor-like protein [Rhizobium etli CIAT 894]
          Length = 186

 Score = 79.5 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 61/183 (33%), Positives = 90/183 (49%)

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
           + LL +  R A       E       +  G KSA + + G  A G      G  R    S
Sbjct: 4   SALLDIIEREAVGLGCSFEKSLGPMPDRHGAKSAVVSLDGLEAEGIASSYCGTIRFTFKS 63

Query: 195 PYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           P     +R   + ++       +  ++ I  +D R +T RA G GGQH NTTDSAVRI H
Sbjct: 64  PARPGHKRQNWYVAVQRIDAGTEGGKVTIDPADLRFETLRAGGPGGQHQNTTDSAVRILH 123

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
            PTG++V+ + ERSQH+NKA A   L A L  +E++K+E   +    +   I  G +++S
Sbjct: 124 RPTGLMVRARDERSQHRNKALALRRLEAMLRHIEVEKQEAAKSGRFVANRTIERGNEVKS 183

Query: 315 YVL 317
           + L
Sbjct: 184 FKL 186


>gi|315497766|ref|YP_004086570.1| peptide chain release factor h [Asticcacaulis excentricus CB 48]
 gi|315415778|gb|ADU12419.1| peptide chain release factor H [Asticcacaulis excentricus CB 48]
          Length = 208

 Score = 79.1 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 59/202 (29%), Positives = 90/202 (44%), Gaps = 5/202 (2%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
             +  L + +G G  E       L R +TR A K     E +   +   A   S  + + 
Sbjct: 1   MTEIILHLTSGKGPDECCWVVAQLSRAFTREALKDGVACEVINSGEELPA---SLLMSVT 57

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G  A  ++    G  + +  SP+    +R   F  + + P        ++ + D    T 
Sbjct: 58  GDQAQAFVSARVGTIQWIGDSPFRPRHKRRNWFVGVNIAP--SPDAMPDLRDEDIVFQTM 115

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           RASG GGQHVN TDSAVR TH  TG+VV  Q++RSQH N+  A   L   L E   +  +
Sbjct: 116 RASGPGGQHVNKTDSAVRATHRSTGLVVTAQEQRSQHANRKLARQKLAVLLDEQRQKASD 175

Query: 294 EIANIGESSKTEIGWGRQIRSY 315
               +  S+   +  G+ +R+Y
Sbjct: 176 SARQVQWSAHQNLERGKSVRTY 197


>gi|116335021|ref|YP_802516.1| peptide chain release factor B [Candidatus Carsonella ruddii PV]
 gi|116235302|dbj|BAF35150.1| peptide chain release factor B [Candidatus Carsonella ruddii PV]
          Length = 270

 Score = 79.1 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 62/181 (34%), Positives = 103/181 (56%), Gaps = 2/181 (1%)

Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
             + L+ + ++ + ++E+ +  GG ++ D     L  Y +W  K KF  E + +      
Sbjct: 36  LINNLNIKFNNLNCFVEIISNQGGIDTHDLNKFFLNFYYKWLLKNKFNVEIINLEQSPY- 94

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G K + LLI    ++   K E G+HR++R +P  S+ +  TS+ ++ + P + +++   I
Sbjct: 95  GYKKSLLLINNFFSFFLFKNESGLHRIIRKNPLISSKKIQTSYLNLNIVPKIINNVNF-I 153

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +++D  I+ YR+ G+GGQHVNTT+SA+RI H PT +VV  Q ERSQ  NK  A   L  K
Sbjct: 154 NKNDLIIENYRSKGSGGQHVNTTNSAIRIVHKPTNIVVTSQSERSQMLNKKFAMQTLEYK 213

Query: 284 L 284
           L
Sbjct: 214 L 214


>gi|169838354|ref|ZP_02871542.1| protease Do [candidate division TM7 single-cell isolate TM7a]
          Length = 351

 Score = 79.1 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 35/74 (47%), Gaps = 4/74 (5%)

Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
             L+ +  +E A +    ++ IG G    +IR+Y   P   + D R +  ++     +DG
Sbjct: 270 RLLQSKIEKEQAKLTAERRSLIGSGDRSEKIRTYNF-PQDRITDHRISYSRSGIPQAMDG 328

Query: 342 DLDDFMKATLAIKK 355
           +++D  +   + ++
Sbjct: 329 NINDLTEHLQSYER 342


>gi|325066842|ref|ZP_08125515.1| peptide chain release factor RF1 [Actinomyces oris K20]
          Length = 68

 Score = 78.7 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 306 IGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           +    +IR+Y   P   + D RT  +  +   VLDGDL   + + +A+ 
Sbjct: 7   VDRSERIRTYNF-PENRIADHRTGFKAYNLDAVLDGDLGPVIASAIAMD 54


>gi|226320937|ref|ZP_03796485.1| Peptide chain release factor 1 [Borrelia burgdorferi 29805]
 gi|226233639|gb|EEH32372.1| Peptide chain release factor 1 [Borrelia burgdorferi 29805]
          Length = 88

 Score = 78.7 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 6/82 (7%)

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKT 333
             +LRA+LYE E  K++E      + K ++G G    +IR+Y   P   + D R NI   
Sbjct: 1   MKILRARLYEFEDSKKQE--QRSSNRKQQVGSGDRSERIRTYNF-PQNRITDHRANITLY 57

Query: 334 SPSDVLDGDLDDFMKATLAIKK 355
              + + G+LD  +   +   +
Sbjct: 58  KLEEFMQGELDPLLDPLMIALQ 79


>gi|226294427|gb|EEH49847.1| peptide chain release factor 1 [Paracoccidioides brasiliensis Pb18]
          Length = 153

 Score = 78.3 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/104 (34%), Positives = 61/104 (58%), Gaps = 5/104 (4%)

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE----EIAN 297
           HVN T+SA+R+THIPTG+VV  Q  RSQH+N+ +AW +LRA++ +   + RE    ++  
Sbjct: 9   HVNKTESAIRLTHIPTGIVVGMQDSRSQHENRRKAWQLLRARIAQRRREAREEEMVKLRR 68

Query: 298 IGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
                  ++G G +IR+Y         D R+ +   +  ++++G
Sbjct: 69  GAMGGVGKMGRGDKIRTYNFG-QNRCTDHRSGLTLHNLVNIMEG 111


>gi|238022850|ref|ZP_04603276.1| hypothetical protein GCWU000324_02770 [Kingella oralis ATCC 51147]
 gi|237865658|gb|EEP66796.1| hypothetical protein GCWU000324_02770 [Kingella oralis ATCC 51147]
          Length = 206

 Score = 78.3 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 63/197 (31%), Positives = 87/197 (44%), Gaps = 5/197 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
            YL++  G    E Q +A  +LR   R AE      E L     +  GI SA   + G  
Sbjct: 2   IYLQLSTGQSPAECQIFAQFVLRKILREAEAAGVAAELLSQTASKH-GILSAVFALSGAG 60

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A    +   G  + +  SP      R   +  ++  P     I     +   R +T RA 
Sbjct: 61  AEDLAQRWLGTLQWIGNSPVRPKHPRKNWYIGVFRLP----QIPALPDDDSIRFETCRAG 116

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVN TDSAVR TH+ TGV V+ + ERSQH NK +A  +L  KL E       + +
Sbjct: 117 GKGGQHVNKTDSAVRATHLATGVSVRVESERSQHANKKRARELLALKLAEQHSAALGQHS 176

Query: 297 NIGESSKTEIGWGRQIR 313
               S   ++  G  +R
Sbjct: 177 AHAHSQLYQVERGNPVR 193


>gi|300770278|ref|ZP_07080157.1| peptide chain release factor RF4 [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300762754|gb|EFK59571.1| peptide chain release factor RF4 [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 232

 Score = 77.9 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 61/203 (30%), Positives = 92/203 (45%), Gaps = 4/203 (1%)

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIK 173
            D  + V AG G  E       +++   + A     + + L+  +G   G   SA+L I 
Sbjct: 1   MDKIIGVTAGRGPEECSWVVAQVIKKIIQEAPTFDVEVQVLDRQEGSINGTVISASLKIS 60

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G N   +     G  + +  S +  + +R   F  ++    +  S        D R    
Sbjct: 61  GENCMAFSALWTGTIQWIGKSDFRKSHKRKNWFIEVF---EIKPSASWIFDVKDIRYQAM 117

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R+SGAGGQHVN   SAVR TH+PTGV V     RSQH+NK  A   L+ K+ EL L   +
Sbjct: 118 RSSGAGGQHVNKVSSAVRATHMPTGVSVVAMDSRSQHQNKKIATERLQTKVNELNLLHWK 177

Query: 294 EIANIGESSKTEIGWGRQIRSYV 316
           E       ++ ++  G  IR++V
Sbjct: 178 ENEKYKWFNQIQVERGNAIRTFV 200


>gi|70936414|ref|XP_739155.1| peptide release factor [Plasmodium chabaudi chabaudi]
 gi|56515938|emb|CAH84701.1| peptide release factor, putative [Plasmodium chabaudi chabaudi]
          Length = 210

 Score = 77.9 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 4/179 (2%)

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD--SIEIEI 223
           K+    IKG   Y     E G+HR+ RI       +  TS   ++      +    +++I
Sbjct: 2   KNIIAHIKGEGVYVDFIQEIGIHRVQRIPINSKKMQTSTSIVLLFDEKQTKEKLEKKMKI 61

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
            ++D  I+T R+ GAGGQ VN  ++ V+ITH PT + V+ Q+  SQ +NK+ A +M++ K
Sbjct: 62  PKNDFIIETKRSGGAGGQSVNKNETCVKITHKPTNIFVEVQKTSSQIQNKSIAMDMIKNK 121

Query: 284 LYE-LELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
           LY     Q++       ++ K       +IR+Y    +  V D   N++ T       G
Sbjct: 122 LYNFYYEQEKMNFLKDKKNQKQNGDRSEKIRTYNFS-HNTVIDHIANVQYTGIDQFFKG 179


>gi|325267596|ref|ZP_08134248.1| peptide chain release factor RF2 [Kingella denitrificans ATCC
           33394]
 gi|324980946|gb|EGC16606.1| peptide chain release factor RF2 [Kingella denitrificans ATCC
           33394]
          Length = 202

 Score = 77.5 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 60/197 (30%), Positives = 88/197 (44%), Gaps = 5/197 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
            YL++  G    E Q +A   LR   R AE      E L     +  G++SA + + G  
Sbjct: 2   IYLQLSTGQAPAECQYFARFALRQMLREAEAAGLDVEILSETPSKH-GLRSAVVAVSGSL 60

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
              + +   G  + V  SP+  N  R   F ++   P           E + R +T RA 
Sbjct: 61  QDNFAQRWLGTLQWVCASPFRPNHARKNWFVAVSRLPDFPAL----PEEGEVRFETCRAG 116

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVN T+SAVR  H  TG+ V+ + ERSQH NK +A  +L  KL     ++    A
Sbjct: 117 GKGGQHVNKTESAVRAVHTATGISVRVESERSQHANKKRALELLAVKLAAQHAEQMGRHA 176

Query: 297 NIGESSKTEIGWGRQIR 313
               +   ++  G  +R
Sbjct: 177 ADAHAQLYQLERGNAVR 193


>gi|167933019|ref|ZP_02520106.1| Protein chain release factor B [candidate division TM7 single-cell
           isolate TM7b]
          Length = 106

 Score = 77.2 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 46/92 (50%), Positives = 63/92 (68%), Gaps = 1/92 (1%)

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQ VNTTDSAVRITH+PTG+ V  Q ERSQ +NK  A  +LR+KL +++ ++  E  N  
Sbjct: 1   GQGVNTTDSAVRITHLPTGITVAIQNERSQIQNKETALKILRSKLAQIQTEQHAETINDL 60

Query: 300 ESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIE 331
            + ++   WG QIR+Y+L PY ++KD RT  E
Sbjct: 61  RAGES-ANWGSQIRNYILHPYTLIKDTRTKYE 91


>gi|225631245|ref|ZP_03787932.1| peptide chain release factor 1 [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225591056|gb|EEH12251.1| peptide chain release factor 1 [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 178

 Score = 76.8 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 7/176 (3%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           +  +  ++ + +    E+P       E   L +E   L   I  I E      +   L E
Sbjct: 4   NLQDLKKKFNDIERNLENPTNLS-QKEFITLSKEYSELRPIIKIIDEYNTLKEEISDLEE 62

Query: 75  LALEEDDCSILQETSDNLQRIK------LEVEYKQFESLLSGEADSNDAYLEVHAGAGGT 128
           +  +E+    ++E +      K            +   L   E DS +A LE+ AG GG 
Sbjct: 63  IMKDENSEGDIKELAKEEFFEKHKVLLPKIKAKLKLALLPKDEDDSRNAILEIRAGTGGE 122

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
           E+  +A ML RMY ++AE+R +K E + I +    G K A+ LI G   +  LK E
Sbjct: 123 EAALFAAMLFRMYQKYAERRNWKFEPISISNTGIGGYKEASALINGTEVFARLKFE 178


>gi|145629735|ref|ZP_01785531.1| peptide chain release factor 1 [Haemophilus influenzae 22.1-21]
 gi|144978072|gb|EDJ87851.1| peptide chain release factor 1 [Haemophilus influenzae 22.1-21]
          Length = 102

 Score = 76.4 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 45/91 (49%), Gaps = 6/91 (6%)

Query: 268 SQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVK 324
              KNKA+A ++L +++ + E +++       +  +  +G G +   IR+Y   P   V 
Sbjct: 4   HSTKNKAKAMSVLASRIVQAEQERQAAEQ--TDMRRNLLGSGDRSDKIRTYNY-PQGRVT 60

Query: 325 DLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           D R N+      +V++G +D+ ++  +   +
Sbjct: 61  DHRINLTIYRLDEVINGKIDELIQPIITEYQ 91


>gi|326201214|ref|ZP_08191086.1| peptide chain release factor H [Clostridium papyrosolvens DSM 2782]
 gi|325988782|gb|EGD49606.1| peptide chain release factor H [Clostridium papyrosolvens DSM 2782]
          Length = 205

 Score = 76.0 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 4/198 (2%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +++ +G G  E +   ++ L+ +     K + K   ++   GE +G   + LL    + +
Sbjct: 3   IQISSGKGPVECELAVSLFLKAFENECNKNQIKINIIDAVPGEISGNYKSVLLSLDCSEH 62

Query: 179 GWLKGE-QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
             +     G    +  SPY  N +R   F ++ V+       ++   E D R ++ R+SG
Sbjct: 63  QVIDNIKSGTVLWICKSPYRPNHKRKNWFINVDVF---QIPDKLSFCEKDVRFESMRSSG 119

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQ+VN  ++AVR  H+PTG+    ++ERSQ+ NK  A   L   + E+   K      
Sbjct: 120 PGGQNVNKVETAVRAIHLPTGLTATAREERSQYMNKKLALCRLSNLIREMNDSKFSVQKR 179

Query: 298 IGESSKTEIGWGRQIRSY 315
                   +  G  IR Y
Sbjct: 180 NLWEQHNALERGNPIRIY 197


>gi|296775661|gb|ADH42938.1| protein chain release factor A [uncultured SAR11 cluster alpha
           proteobacterium H17925_23J24]
          Length = 214

 Score = 76.0 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 42/191 (21%), Positives = 76/191 (39%), Gaps = 7/191 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
               ++R   L  +     +           +E   L N +   KE  D   +   L  +
Sbjct: 7   VKKVIERYISLEKELSTGKV--EPKLLAKKSKEYSDLKNILPSAKEYVDFEKNKKDLNNI 64

Query: 76  ALEEDDCSIL-----QETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
             ++ +   +     +E  D ++  +   +  +   L   + D  +  +E+ AG GG E+
Sbjct: 65  IEDKKNDKEMISLAEKELKDAIENKEKNEKKLKIFLLPKDKDDEKNTIVEIRAGTGGLEA 124

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             +   L RMY +   K+ +K E + I   E  G K     + G N Y +LK E GVHR+
Sbjct: 125 TLFVADLFRMYEKVCSKKGWKIEIISISKSEAKGFKEVIFSVIGENIYSYLKYESGVHRV 184

Query: 191 VRISPYDSNSR 201
            R+   ++  R
Sbjct: 185 QRVPTTEAQGR 195


>gi|319637886|ref|ZP_07992652.1| peptide chain release factor H [Neisseria mucosa C102]
 gi|317401041|gb|EFV81696.1| peptide chain release factor H [Neisseria mucosa C102]
          Length = 206

 Score = 76.0 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 2/200 (1%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
            YL++    G  E + +A  +L      A+ +    E +     ++ GI SATL ++G  
Sbjct: 2   IYLQISTAQGPAECRIFARFVLGKLLAEAQAKGIDAELVTETA-DKHGILSATLKLEGQK 60

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A    +  QG  + +  SP      R   +  ++  P +  + E+  SE+     T R+ 
Sbjct: 61  AESLAQTWQGTLQWICPSPVRPKHPRKNWYIGVFRLPDMPQTYEM-PSENGIEFQTCRSG 119

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVN T+SAVR TH  +G+ V+ + ERSQH NK  A  +L  KL E    +    A
Sbjct: 120 GKGGQHVNKTESAVRATHKESGISVRVESERSQHANKKLAVMLLAQKLAEHHAGQAGSFA 179

Query: 297 NIGESSKTEIGWGRQIRSYV 316
               +   ++  G   R++V
Sbjct: 180 QEQHAQLYQVERGNPKRTFV 199


>gi|289678407|ref|ZP_06499297.1| peptide chain release factor 1 [Pseudomonas syringae pv. syringae
           FF5]
          Length = 145

 Score = 75.6 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 3/136 (2%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            D    R   L     D  +  +    +   RE   ++  ++   ++     D      L
Sbjct: 9   LDVLSDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVVTLYAQLLRVQGDLEGAQAL 68

Query: 76  ALEEDDCSILQETSDNLQRIK---LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
             + D         +  +  +         Q   L     D  + +LE+ AG GG E+  
Sbjct: 69  LKDSDPDMREMAVEEVRETRQQLVELEAQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAI 128

Query: 133 WANMLLRMYTRWAEKR 148
           ++  L RMY+R+AE+R
Sbjct: 129 FSGDLFRMYSRYAERR 144


>gi|261379932|ref|ZP_05984505.1| putative peptide chain release factor H [Neisseria subflava NJ9703]
 gi|284797642|gb|EFC52989.1| putative peptide chain release factor H [Neisseria subflava NJ9703]
          Length = 212

 Score = 75.6 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 2/200 (1%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
            YL++    G  E + +A  +L      A+ +    E +     ++ GI SATL ++G  
Sbjct: 8   IYLQISTAQGPAECRIFARFVLGKLLAQAQAKGIDAELVTETA-DKHGILSATLKLEGQK 66

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A    +  QG  + +  SP      R   +  ++  P +    E+  SE+     T R+ 
Sbjct: 67  AESLAQTWQGTLQWICPSPVRPKHPRKNWYIGVFRLPDMPQMYEM-PSENGIEFQTCRSG 125

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVN T+SAVR TH  +G+ V+ + ERSQH NK  A  +L  KL E    +    A
Sbjct: 126 GKGGQHVNKTESAVRATHKESGISVRVESERSQHANKKLAVMLLAQKLAEHHAGQAGSFA 185

Query: 297 NIGESSKTEIGWGRQIRSYV 316
               +   ++  G   R++V
Sbjct: 186 QEQHAQLYQVERGNPKRTFV 205


>gi|108763642|ref|YP_629741.1| ClpA/B family protein [Myxococcus xanthus DK 1622]
 gi|108467522|gb|ABF92707.1| ClpA/B family protein [Myxococcus xanthus DK 1622]
          Length = 966

 Score = 75.6 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 58/334 (17%), Positives = 120/334 (35%), Gaps = 40/334 (11%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
              QR + L  +T+ P+LW +   A  ++R  + ++  ++ ++ ++        L+  A 
Sbjct: 661 QLEQRRAELLAETQAPNLWDDPTRAAEVIRAFRTVEAQLNELERLEAAGLFARRLVREAK 720

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
            E          +++ R        +            +A +++ A         W   L
Sbjct: 721 NEVQLGSAARQVEDVAREVQMA---EALHASGATTQDTEALVDICASDSVEAQATWVQEL 777

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
             MY  WA++R ++  A+   +          + I GP AYG+L GE G+HR +      
Sbjct: 778 ATMYLGWAQRRGYEAVAVAEAEEP----SRVVVRIAGPGAYGFLAGEAGMHRRLE----- 828

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
            + +R  ++  +     + +     +      +         G ++    + V +    +
Sbjct: 829 -DEKRQRAYVRVHRGGSLSEEELAYLEVQGRPMK-----SHEGAYLQRVRTEVTVKDESS 882

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVL 317
           G V+         + K  A  ++             + +N  E+ +  +G G        
Sbjct: 883 GRVLTLTGATELDELKDIAARVVYG-----------QGSNTDEARRYYLGRG-------- 923

Query: 318 QPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
                V+D RT        DVL G+LD F+ A +
Sbjct: 924 ---ARVEDPRTGAGTPRVKDVLRGELDVFIAAWI 954


>gi|326525162|dbj|BAK07851.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 149

 Score = 75.6 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 2/139 (1%)

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
              +   + ++D  I    +    G   N     VR+ HIP+GV  +   ERS   NK +
Sbjct: 11  TRPVNFHLDDNDLEISPLPSKCENGDRRNGA--TVRVQHIPSGVTAESSGERSYFANKLK 68

Query: 276 AWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
           A + L+AKL  +  + R     + E    E G  R+ R Y L P ++V DL T I+ +  
Sbjct: 69  AVSRLKAKLLIITRELRVPDPKMMEKQAVEEGCNRETRRYTLGPQELVHDLNTGIQLSDL 128

Query: 336 SDVLDGDLDDFMKATLAIK 354
           + VL+GD++ F++  +  +
Sbjct: 129 NSVLEGDIEPFIRGRIVSR 147


>gi|261822834|ref|YP_003260940.1| peptide chain release factor-like protein [Pectobacterium wasabiae
           WPP163]
 gi|261606847|gb|ACX89333.1| peptide chain release factor H [Pectobacterium wasabiae WPP163]
          Length = 207

 Score = 75.6 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 6/197 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L++ A  G  E        L+   R A ++  ++E +E   G+ AG  +SA +L+ G 
Sbjct: 2   ILLQLSAAQGPDECMLATAKALQALIRDAARQGIESEIIETEAGKRAGTLRSALVLLNGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A        G  +    SP+     R   F  I  +       E   ++++ R +T ++
Sbjct: 62  QAEPLAASWCGTLQWTCNSPWRKGGGRKNWFIGIARF-----HQERAFADNEIRFETTKS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN T+SAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L  L+ Q+  E+
Sbjct: 117 SGPGGQHVNKTESAVRATHVASGITVKVQSERSQHANKRLACYLIAYRLEALQQQQHAEL 176

Query: 296 ANIGESSKTEIGWGRQI 312
                    +I  G  I
Sbjct: 177 RAQRRLFHHQIERGNPI 193


>gi|270659693|ref|ZP_06222357.1| peptide chain release factor 1 [Haemophilus influenzae HK1212]
 gi|270316971|gb|EFA28651.1| peptide chain release factor 1 [Haemophilus influenzae HK1212]
          Length = 170

 Score = 75.2 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 1/148 (0%)

Query: 67  CDNLILLELALEEDDCSILQETSDNLQ-RIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
            +      L  + +   + Q   +  +  I+   +  Q   L     D  + YLE+ AG 
Sbjct: 2   QNIEEAEILLDDPEMKEMAQMEIEESKAEIEEVEQQLQILLLPKDPNDEYNCYLEIRAGT 61

Query: 126 GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQ 185
           GG E+  +A  L RMY+R+AE ++++ E L  ++ E+ G K   + + G   YG LK E 
Sbjct: 62  GGDEAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKELIVKVTGEGVYGQLKFES 121

Query: 186 GVHRLVRISPYDSNSRRHTSFSSIWVYP 213
           G HR+ R+   +S  R HTS  ++ V P
Sbjct: 122 GGHRVQRVPKTESQGRIHTSACTVAVMP 149


>gi|225076746|ref|ZP_03719945.1| hypothetical protein NEIFLAOT_01797 [Neisseria flavescens
           NRL30031/H210]
 gi|224951914|gb|EEG33123.1| hypothetical protein NEIFLAOT_01797 [Neisseria flavescens
           NRL30031/H210]
          Length = 212

 Score = 75.2 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 58/200 (29%), Positives = 92/200 (46%), Gaps = 2/200 (1%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
            YL++    G  E + +A  +L      A+ +    E +     ++ GI SATL ++G  
Sbjct: 8   IYLQISTAQGPAECRIFARFVLGKLLAEAQVKGIDAELVTETA-DKHGILSATLKLEGQK 66

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
                +  QG  + +  SP      R   +  ++  P +    E+  SE+     T R+ 
Sbjct: 67  TESLAQTWQGTLQWICPSPIRPKHPRKNWYIGVFRLPDMPQRYEM-PSENGIEFQTCRSG 125

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVN T+SAVR TH  +G+ V+ + ERSQH NK  A  +L  KL E    +    A
Sbjct: 126 GKGGQHVNKTESAVRATHKESGISVRVESERSQHANKKLAVMLLAQKLAEHHAGQAGNFA 185

Query: 297 NIGESSKTEIGWGRQIRSYV 316
               +   ++  G   R++V
Sbjct: 186 QEQHAQLYQVERGNPKRTFV 205


>gi|254472541|ref|ZP_05085940.1| putative peptide chain release factor H [Pseudovibrio sp. JE062]
 gi|211958005|gb|EEA93206.1| putative peptide chain release factor H [Pseudovibrio sp. JE062]
          Length = 212

 Score = 75.2 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 1/198 (0%)

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
              L + +G G  E +      +    + A+K      +        A + SA + + G 
Sbjct: 6   TVRLLLSSGDGPAECRLALCHSVAAMEKTAKKLGLSFASDPERSDLSANVASAEVTLAGE 65

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A  + K   G  +    SP+  N +R   F  ++  P V  +   E +  D R +T RA
Sbjct: 66  GAKTFAKAWCGTIKWTCQSPFRPNHKRQNWFIGVYELP-VSAAEAGEFNAEDLRFETLRA 124

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
            G GGQH N T+SAVR+TH+PTG+ V  + ERSQH+NK  A   L+ KL  L  ++   +
Sbjct: 125 GGPGGQHQNKTESAVRVTHVPTGLSVVARDERSQHRNKQIALQRLQEKLSGLSAEEGARL 184

Query: 296 ANIGESSKTEIGWGRQIR 313
                    ++  G  +R
Sbjct: 185 RKSERLLHHQLERGNPVR 202


>gi|115372342|ref|ZP_01459651.1| chaperone ClpB [Stigmatella aurantiaca DW4/3-1]
 gi|310819555|ref|YP_003951913.1| ClpA/B family protein [Stigmatella aurantiaca DW4/3-1]
 gi|115370555|gb|EAU69481.1| chaperone ClpB [Stigmatella aurantiaca DW4/3-1]
 gi|309392627|gb|ADO70086.1| ClpA/B family protein [Stigmatella aurantiaca DW4/3-1]
          Length = 939

 Score = 74.5 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 61/334 (18%), Positives = 125/334 (37%), Gaps = 40/334 (11%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
             +R + L ++T+ P+LW +   A   +R  + ++  I+ ++ ++  +     L+  A  
Sbjct: 636 LEERRNQLLSETQAPNLWDDPARAAATLRAFRTVEAQINELERMEQAVTFARRLVREAKN 695

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
           E   +   +  + + R        +        A+  +A +++           W   L 
Sbjct: 696 EVQLTSAAKQVEEVAREVQMS---EALHASGATANDVEALVDICVSDSVEAQDAWIQELA 752

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
            MY  WA+KR ++   +   +          + I GP AYG+L GE G+HR +       
Sbjct: 753 TMYLGWAQKRGYEAMLVAEAESPA----RVVVRIAGPGAYGFLAGEAGLHRRIE------ 802

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
             +R  ++  +     +D   ++E+S     +  +      G  +    + V +    TG
Sbjct: 803 EEKRQRAYVRVHRGGALDAPEDLELSVEGRPVKQHE-----GAFLERVRTEVTVKDSATG 857

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
            V+         + K  A  ++             +  +  E+ +  +G G         
Sbjct: 858 RVLTLMGSGELDELKGIATRVVSG-----------QATSTDEARRYYLGRG--------- 897

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
               V+D RT        DVL GD+D F+ A ++
Sbjct: 898 --ARVEDPRTGAGTPRVKDVLRGDMDLFIAAWIS 929


>gi|50122538|ref|YP_051705.1| peptide chain release factor-like protein [Pectobacterium
           atrosepticum SCRI1043]
 gi|49613064|emb|CAG76515.1| putative peptide chain release factor [Pectobacterium atrosepticum
           SCRI1043]
          Length = 207

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 6/195 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L++ A  G  E        L   TR A ++  + E +E   G+ AG  +SA +L+ G 
Sbjct: 2   ILLQLSAAQGPDECMLATAKALHALTRDAARQGIECEIIETEVGKRAGTLRSALVLLNGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A        G  +    SP+     R   F  +  +       E   ++ + R +T ++
Sbjct: 62  QAEPLAASWCGTLQWTCNSPWRKGGGRKNWFIGVARF-----HQEQAFADDEIRFETTKS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN T+SAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L  L+ Q+  E+
Sbjct: 117 SGPGGQHVNKTESAVRATHVASGITVKVQSERSQHANKRLACYLIAYRLEALQQQQHAEL 176

Query: 296 ANIGESSKTEIGWGR 310
                    +I  G 
Sbjct: 177 RAQRRLFHHQIERGN 191


>gi|88607060|ref|YP_505064.1| peptide chain release factor 2, truncation [Anaplasma
           phagocytophilum HZ]
 gi|88598123|gb|ABD43593.1| peptide chain release factor 2, truncated [Anaplasma
           phagocytophilum HZ]
          Length = 72

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 19/38 (50%), Positives = 25/38 (65%)

Query: 315 YVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
           Y + PY+MVKDLRT  E  +   V++GDLD F+ A L 
Sbjct: 23  YKMHPYRMVKDLRTGHETGNVDAVMNGDLDAFITAALM 60


>gi|303240867|ref|ZP_07327379.1| peptide chain release factor H [Acetivibrio cellulolyticus CD2]
 gi|302591595|gb|EFL61331.1| peptide chain release factor H [Acetivibrio cellulolyticus CD2]
          Length = 204

 Score = 74.1 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 6/197 (3%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +++ +G G  E +   ++ L+ Y    + +   T  ++   G  +G   + LL     A 
Sbjct: 3   IQISSGKGPDECELAVSLFLKSYQNECKNKGIITNVIDAIPGNISGNLKSVLLSLECQAQ 62

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             L    G    +  SPY  N +R   F ++  +     + ++  SE D   ++ R+SG 
Sbjct: 63  EEL---NGTVLWICKSPYRPNHKRKNWFINVEAF---QSTEKLNFSEKDVSFESMRSSGP 116

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQ+VN  +SAVR  H+PTG+ V   +ERSQ+ NK  A   L   +  +  +        
Sbjct: 117 GGQNVNKVESAVRAIHLPTGLTVTASEERSQYMNKKLALGRLSNLIKAINNEDSASHKKT 176

Query: 299 GESSKTEIGWGRQIRSY 315
                 ++  G  IR Y
Sbjct: 177 MWMQHNDLERGNPIRIY 193


>gi|307688011|ref|ZP_07630457.1| peptide chain release factor 2 [Clostridium cellulovorans 743B]
          Length = 80

 Score = 73.7 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 52/80 (65%), Positives = 63/80 (78%)

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           +D YR SGAGGQHVN T+SAVRITHIPTG+V QCQ +RSQHKNK QA   ++AKLYELE+
Sbjct: 1   MDVYRTSGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEM 60

Query: 290 QKREEIANIGESSKTEIGWG 309
           QK+       E +K++IGWG
Sbjct: 61  QKKNAEKQAMEDNKSDIGWG 80


>gi|300775389|ref|ZP_07085251.1| probable peptide chain release factor H [Chryseobacterium gleum
           ATCC 35910]
 gi|300506129|gb|EFK37265.1| probable peptide chain release factor H [Chryseobacterium gleum
           ATCC 35910]
          Length = 232

 Score = 73.7 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 57/201 (28%), Positives = 100/201 (49%), Gaps = 4/201 (1%)

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIK 173
            +  +++ +G G  E Q  A  +L+ +   A++     E +   +G+E   +KS T+L+K
Sbjct: 1   MEKIIQITSGRGPLECQWVAAKVLKTFLEEAKQNTIDYEIIHRENGDENLTLKSVTILLK 60

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G     +LK   G       S +    +R   F  I+    +++   I+ +E D R  T 
Sbjct: 61  GKEINLFLKNWLGTVCWTGKSTFRKLHKRSNWFIGIF---ELENVKMIDFNEKDIRFQTA 117

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R+ G+GGQ+VN  ++AVR THIPT   V  Q  RSQ +NK ++   L+ K+  + +Q+ E
Sbjct: 118 RSQGSGGQNVNKVNTAVRATHIPTNETVFVQDSRSQLENKKRSVIRLKEKVMAVYIQQLE 177

Query: 294 EIANIGESSKTEIGWGRQIRS 314
                  S + ++  G  +R+
Sbjct: 178 RKMKDTWSLQMQVERGNPVRT 198


>gi|218670324|ref|ZP_03519995.1| peptide chain release factor-like protein [Rhizobium etli GR56]
          Length = 175

 Score = 73.3 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 54/153 (35%), Positives = 77/153 (50%)

Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217
              +  G KSA + + G +A     G  G  R    SP     +R   + ++       +
Sbjct: 16  PMPDRHGAKSAIVNLDGLHADRIAGGYCGKIRFTFESPVRPGHKRQNWYVAVQRIQAGPE 75

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
             ++ I+ +D R  T RA G GGQH NTTDSAVR+ H PTG+VV  + ERSQH+NKA A 
Sbjct: 76  GGQVTINPADQRFQTLRAGGPGGQHQNTTDSAVRVLHRPTGLVVTARDERSQHRNKALAL 135

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWGR 310
             L A L ++E +K+E   +    +   I  G 
Sbjct: 136 RRLEAMLRQVEAEKQEAAKSGRFIANRTIERGN 168


>gi|300697304|ref|YP_003747965.1| peptide chain release factor homolog protein [Ralstonia
           solanacearum CFBP2957]
 gi|299074028|emb|CBJ53565.1| putative peptide chain release factor homolog protein [Ralstonia
           solanacearum CFBP2957]
          Length = 210

 Score = 73.3 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 6/195 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L+  +  G  E +      L    R + +   + E +E  DGE AG  +SA + ++G 
Sbjct: 5   ILLQFSSAQGPAECELAVVKALACLLRESARAGVRAEIVEQEDGECAGTLRSALVSLEGD 64

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
                 +  +G  +    SPY     R   F  +        +       S+ R +T RA
Sbjct: 65  AEADVAQRWEGTIQWTCPSPYRPRHARKNWFFGVARC-----AAPAVTLPSEIRFETTRA 119

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN T+SAVR  H+ TG+ V+ Q ERSQH NK  A  +L  +L   E       
Sbjct: 120 SGPGGQHVNKTESAVRAIHVATGISVKVQTERSQHANKRLAVLLLAHRLANHEEAMNAAQ 179

Query: 296 ANIGESSKTEIGWGR 310
                +   ++  G 
Sbjct: 180 RAQRRTLHHQVERGN 194


>gi|302420205|ref|XP_003007933.1| peptide chain release factor 1 [Verticillium albo-atrum VaMs.102]
 gi|261353584|gb|EEY16012.1| peptide chain release factor 1 [Verticillium albo-atrum VaMs.102]
          Length = 253

 Score = 73.3 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 64/191 (33%), Positives = 97/191 (50%), Gaps = 28/191 (14%)

Query: 140 MYTRWAEKRKFKTEALEIHDGEEAGI----------KSATLLIKGPNAYGWLKGEQGVHR 189
           MY ++     ++  AL+    + AG           + A L IK   AYG  +GE G+HR
Sbjct: 1   MYKQYCAYMGYRAVALKYEMADGAGSASTSAGEEPLQEAVLEIKDAGAYGLFRGEAGMHR 60

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSI------------------EIEISESDCRID 231
           + R+   + + R HTS  ++WV P   DS                   +  +  ++ RI+
Sbjct: 61  VQRVPDTEKSGRTHTSAVAVWVLPSFPDSHEAAGGGGGGDMNVDDPASDFYLDPAELRIE 120

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T RA GAGGQHVN T+SA+R+TH+PTG VV  Q  R Q +N+  AW ++R+++  L  + 
Sbjct: 121 TMRARGAGGQHVNKTESAIRMTHLPTGTVVSMQDSRQQSRNREDAWKLMRSRVALLRREA 180

Query: 292 REEIANIGESS 302
           REE A     +
Sbjct: 181 REEQAARLRDN 191


>gi|239623937|ref|ZP_04666968.1| peptide chain release factor 2 [Clostridiales bacterium 1_7_47_FAA]
 gi|239521968|gb|EEQ61834.1| peptide chain release factor 2 [Clostridiales bacterium 1_7_47FAA]
          Length = 196

 Score = 72.9 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 12/199 (6%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             +++ +G G  E +    +  R   +     +    A         G            
Sbjct: 1   MRVQISSGQGPAECELAVGLFYRQLQKERRDMRLVQSAH--------GKTGRGYSSIMFE 52

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
               ++  +G    +  SP+    RR   F  + +   + D+ E        R +T+ + 
Sbjct: 53  TEEDMRELEGSVLWICKSPFRPEHRRKNWFIDVSILEQLPDAREDM----KLRFETFCSG 108

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVN  ++ VRI H+PTG+ V   + RSQH NK  A N L   L ++EL+ R+   
Sbjct: 109 GKGGQHVNKVETGVRIIHVPTGISVVSTEARSQHMNKKLAMNRLCDILADMELENRQREK 168

Query: 297 NIGESSKTEIGWGRQIRSY 315
            +     T +  G  +R Y
Sbjct: 169 ELAWLEHTRLERGNPVRIY 187


>gi|15896625|ref|NP_349974.1| protein chain release factor B [Clostridium acetobutylicum ATCC
           824]
 gi|15026468|gb|AAK81314.1|AE007835_3 Protein chain release factor B [Clostridium acetobutylicum ATCC
           824]
 gi|325510788|gb|ADZ22424.1| Protein chain release factor B [Clostridium acetobutylicum EA 2018]
          Length = 204

 Score = 72.9 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 60/200 (30%), Positives = 95/200 (47%), Gaps = 4/200 (2%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL-LIKGPNA 177
           L++ AG G  ES  +  + L +  +  + R  K E L+   GE+ G   +    + G  A
Sbjct: 3   LQISAGTGPVESCRFVYLFLNLVKKECKYRNIKIEVLDFVPGEKIGTLKSVFLKLSGEGA 62

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
             +     G H L+  S Y  N RR   F ++  +    +     +++ D  I+  R+SG
Sbjct: 63  KTYASSITGTHLLIWESEYRKNHRRKNWFIAVNSFSYETNED---LNDKDIIIEKMRSSG 119

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQHVN T++AVRITH  TG+VV   +ERSQ  N   A   L  +L +L  ++R+   +
Sbjct: 120 KGGQHVNKTETAVRITHKKTGIVVNSSEERSQFANIKLAKARLIIELKKLSDERRKRNRS 179

Query: 298 IGESSKTEIGWGRQIRSYVL 317
              ++   I  G  +  Y  
Sbjct: 180 ERWTAGINIVRGNPVNVYTY 199


>gi|256426219|ref|YP_003126872.1| peptide chain release factor-like protein [Chitinophaga pinensis
           DSM 2588]
 gi|256041127|gb|ACU64671.1| peptide chain release factor H [Chitinophaga pinensis DSM 2588]
          Length = 210

 Score = 72.5 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 10/203 (4%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI- 172
            N + ++V AG G  E       ++ M  + A  +      LE   G   G   + +L+ 
Sbjct: 1   MNKSIIQVTAGRGPEECSRVVARVVEMMMKDARGKALDITLLESTKGHLKGTLLSAVLLI 60

Query: 173 ------KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
                        +++  +G  + V  SP+    +R   F  + V+ V         +  
Sbjct: 61  QTGGISSNKTLEAFIQEWRGTIQWVAQSPFRKYHKRKNWFVGVEVFDVNKQQE---WNLK 117

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D ++++ RASG GGQHVN  ++AVR TH+P+G+ V     RSQ +NK      L AK   
Sbjct: 118 DVKLESCRASGPGGQHVNKVETAVRGTHLPSGMQVLAMDSRSQLENKQLCLKRLEAKFMA 177

Query: 287 LELQKREEIANIGESSKTEIGWG 309
            ++++             E+  G
Sbjct: 178 WQMEQLLAKQQDQWQEHNELERG 200


>gi|315652605|ref|ZP_07905584.1| chain release factor B [Eubacterium saburreum DSM 3986]
 gi|315485145|gb|EFU75548.1| chain release factor B [Eubacterium saburreum DSM 3986]
          Length = 199

 Score = 72.5 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 52/199 (26%), Positives = 83/199 (41%), Gaps = 9/199 (4%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             L++ AG G  E Q     + +   +     +  +           G +  T      +
Sbjct: 1   MILQISAGMGPVECQRAVFGICKALMKEIPSLEILSYVD--------GEEKETFYSVMLS 52

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           +   L   +G    +  S Y    +R   F  + + P    +++   SE+D  ++ + AS
Sbjct: 53  SDEDLSYIEGTMLWICKSRYRPEHKRKNWFVDVSIIP-ETVNVDDNFSEADIIVEKFHAS 111

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ+VN  ++ VR+ HIPTG+ +   +ERSQ  NK  A   L   L      + E+  
Sbjct: 112 GPGGQNVNKVETGVRVIHIPTGIRISSTRERSQLMNKKDALRKLAIVLKNKNTSQIEQSK 171

Query: 297 NIGESSKTEIGWGRQIRSY 315
           N   S  TEI  G  IR Y
Sbjct: 172 NNAWSKHTEIVRGNPIRVY 190


>gi|266622715|ref|ZP_06115650.1| peptide chain release factor 2 [Clostridium hathewayi DSM 13479]
 gi|288865552|gb|EFC97850.1| peptide chain release factor 2 [Clostridium hathewayi DSM 13479]
          Length = 51

 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/37 (54%), Positives = 24/37 (64%)

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           +QPY MVKD RTN E  + + VLDG LD F+ A L  
Sbjct: 1   MQPYTMVKDHRTNAETGNVNSVLDGALDLFIYAYLRW 37


>gi|70729456|ref|YP_259194.1| peptide chain release factor-like protein [Pseudomonas fluorescens
           Pf-5]
 gi|68343755|gb|AAY91361.1| peptide chain release factor 2 [Pseudomonas fluorescens Pf-5]
          Length = 206

 Score = 72.1 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 6/199 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGP 175
             L++ +  G  E +      LR     AE +  +   +E    +     +S  + + G 
Sbjct: 3   MLLQLSSAQGPAECELAVTHALRRLHHEAEAQNVRLGIIEQVASQARDAHRSVLVSLDGE 62

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           +A    +   G    +  SP     RR   + +    P             + R +  RA
Sbjct: 63  HAANLARRWTGTLLWICKSPLRPAHRRKNWYFAGQ--PFCALEEA---EGGEIRFEAMRA 117

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ TG+ V+ Q ERSQH NK  A  +++ +L + + Q  +E+
Sbjct: 118 SGPGGQHVNKTDSAVRATHVATGISVKVQSERSQHDNKRLARLLIQQRLADRQEQSVQEL 177

Query: 296 ANIGESSKTEIGWGRQIRS 314
                 +   +  G  +R+
Sbjct: 178 RLQRRDAHHRVERGNAVRT 196


>gi|227325964|ref|ZP_03829988.1| peptide chain release factor-like protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 207

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 57/195 (29%), Positives = 91/195 (46%), Gaps = 6/195 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L++ A  G  E        L+  TR A ++  + E +E   G+ +G  +SA +L+ G 
Sbjct: 2   ILLQLSAAQGPDECMLATAKALQALTRDAARQGIECEVIETEAGKRSGTLRSALVLLNGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A        G  +    SP+     R   F  I  +       E   ++++ R +  ++
Sbjct: 62  QAEPLAASWCGTLQWTCNSPWRKGGGRKNWFIGIARF-----HQEQAFADNEIRFEATKS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN T+SAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L  L+ Q+  E+
Sbjct: 117 SGPGGQHVNKTESAVRATHVASGITVKVQSERSQHANKRLACYLIAYRLEALQQQQHAEL 176

Query: 296 ANIGESSKTEIGWGR 310
                    +I  G 
Sbjct: 177 RAQRRLFHHQIERGN 191


>gi|207724424|ref|YP_002254821.1| peptide chain release factor homolog protein [Ralstonia
           solanacearum MolK2]
 gi|206589645|emb|CAQ36606.1| peptide chain release factor homolog protein [Ralstonia
           solanacearum MolK2]
          Length = 207

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 6/195 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L+  +  G  E +      L    R + +   + E +E  DGE AG  +SA + ++G 
Sbjct: 2   ILLQFSSAQGPAECELAVVKALACLLRESARAGVRAEIVEQEDGEHAGTLRSALVSLEGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
                 +  +G  +    SPY     R   F  +        +       S+ R +T RA
Sbjct: 62  AEADIAQRWEGTIQWTCPSPYRPRHARKNWFFGVARC-----AAPAVTLPSEIRFETTRA 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN T+SAVR  H+ TG+ V+ Q ERSQH NK  A  +L  +L   E       
Sbjct: 117 SGPGGQHVNKTESAVRAVHVATGISVKVQTERSQHANKRLAVLLLAHRLASHEETMNAAQ 176

Query: 296 ANIGESSKTEIGWGR 310
                +   ++  G 
Sbjct: 177 RAQRRTLHHQVERGN 191


>gi|260596640|ref|YP_003209211.1| putative peptide chain release factor [Cronobacter turicensis
           z3032]
 gi|260215817|emb|CBA28276.1| Putative peptide chain release factor homolog [Cronobacter
           turicensis z3032]
          Length = 240

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 59/206 (28%), Positives = 88/206 (42%), Gaps = 6/206 (2%)

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KS 167
           +         L++ +  G  E     +  L    + A +       +E   G  AG  +S
Sbjct: 29  NQRGAKRMILLQLSSAQGPDECCLAVSKALEALRKEAAQADVALSVIEEEPGPRAGTLRS 88

Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
           A + ++G NA    +   G  + +  SPY     R   F    V+     +   ++ +SD
Sbjct: 89  ALVSLEGENAQPLAQRWCGTLQWICESPYRPRHARKNWFIGAAVF-----TPVGDMPQSD 143

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
            R D  RASG GGQHVN TDSA+R TH+ +G+ V+ Q ERSQH NK  A  ++  KL E 
Sbjct: 144 IRFDALRASGPGGQHVNKTDSAIRATHVASGISVKVQSERSQHANKRLATLLIAHKLEEQ 203

Query: 288 ELQKREEIANIGESSKTEIGWGRQIR 313
              +             +I  G   R
Sbjct: 204 RDAQSAGQKAQRRWFHHQIARGNPTR 229


>gi|227112372|ref|ZP_03826028.1| peptide chain release factor-like protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 207

 Score = 71.8 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 57/195 (29%), Positives = 88/195 (45%), Gaps = 6/195 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L++ A  G  E        L   TR A ++    E +E   G+ AG  +SA +L+ G 
Sbjct: 2   ILLQLSAAQGPDECMLATTKALHALTRDAARQGVNCEIIETEAGKRAGTLRSALVLLNGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A        G  +    SP+     R   F  +  +       E   ++ + R +  ++
Sbjct: 62  QAEPLAANWCGTLQWTCNSPWRKGGGRKNWFIGVARF-----HQEQAFADHEIRFEATKS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN T+SAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L  L+ Q+  E+
Sbjct: 117 SGPGGQHVNKTESAVRATHVASGITVKVQSERSQHANKRLACYLIAYRLEALQQQQHAEL 176

Query: 296 ANIGESSKTEIGWGR 310
                    +I  G 
Sbjct: 177 RPQRRLFHHQIERGN 191


>gi|146301198|ref|YP_001195789.1| peptide chain release factor-like protein [Flavobacterium
           johnsoniae UW101]
 gi|146155616|gb|ABQ06470.1| Class I peptide chain release factor [Flavobacterium johnsoniae
           UW101]
          Length = 229

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 4/197 (2%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA-TLLIKGPN 176
            +++ AG G  E       +L+     A+ +      L+   GEE G     ++ +KG N
Sbjct: 4   IIQITAGRGPAECTWVVAQVLKKVLEEAQDQNLDVVLLQREKGEENGTIETASISVKGKN 63

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A  ++K   G  + +  S +    +R   F  I+    ++      +SE+D +    R+S
Sbjct: 64  ADQFVKSWIGTIQWIGQSQFRKMHKRKNWFIGIF---EIEPQKNASVSENDIQYQAMRSS 120

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQHVN   SA+R THIPTG+ V     RSQH+NK  A   L  KL + +L + +   
Sbjct: 121 GAGGQHVNKVSSAIRATHIPTGIAVVAMDSRSQHQNKKLATERLLKKLEDEKLVQLKNHV 180

Query: 297 NIGESSKTEIGWGRQIR 313
                ++  +  G  IR
Sbjct: 181 GKQWENQLNVERGNPIR 197


>gi|160897900|ref|YP_001563482.1| peptide chain release factor H [Delftia acidovorans SPH-1]
 gi|160363484|gb|ABX35097.1| peptide chain release factor H [Delftia acidovorans SPH-1]
          Length = 199

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 57/194 (29%), Positives = 79/194 (40%), Gaps = 7/194 (3%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNA- 177
           +++ A  G  E +    + LR   R         + LE      AG KS  L  +G    
Sbjct: 4   IQLTASHGPAECEHAVRLTLRELLRDCAASGIAVDVLEETPTP-AGYKSVLLRCEGDTGL 62

Query: 178 -YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
            +G L    G  + V  SP   +  R   F    V     +      ++ +      +AS
Sbjct: 63  LHGTLGAWLGTIQWVFDSPLRPHHPRRNWF----VAVQKCEPPRQLPADGEIVFQACKAS 118

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVNTTDSAV   H+P+G+ V+   ERSQH NK  A  +L  KL  L  Q   +  
Sbjct: 119 GKGGQHVNTTDSAVHALHVPSGISVKVMSERSQHANKRLARELLALKLARLNAQGEGQAR 178

Query: 297 NIGESSKTEIGWGR 310
                   E+  G 
Sbjct: 179 RTRSQQHWEVERGS 192


>gi|261345238|ref|ZP_05972882.1| putative peptide chain release factor H [Providencia rustigianii
           DSM 4541]
 gi|282566935|gb|EFB72470.1| putative peptide chain release factor H [Providencia rustigianii
           DSM 4541]
          Length = 203

 Score = 71.8 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 6/194 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             L+  +  G  E           + + A     + + LE    ++ G+KS  + ++G  
Sbjct: 2   TLLQFSSAQGPDECCIAVEKAFSCFLKEAALLDVQIDVLESFPSKQ-GLKSVLVSLEGKQ 60

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           +   +    G  +    SP     +R   F S+  +  +    E     S+   +  ++ 
Sbjct: 61  SEQLVNVWSGTVQWQCQSPLRPRHKRKNWFISVIAFSPIQPLEE-----SEIEYEFTKSQ 115

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQHVN T SAVR  H+ TG+ V+ Q ERSQH NK  A  ++  KL E + Q+R ++ 
Sbjct: 116 GAGGQHVNKTCSAVRAKHVSTGISVKVQSERSQHANKRLAKELIHWKLSEFQSQQRTDLD 175

Query: 297 NIGESSKTEIGWGR 310
                S  +I  G 
Sbjct: 176 KQRHHSHYQIERGN 189


>gi|212710167|ref|ZP_03318295.1| hypothetical protein PROVALCAL_01221 [Providencia alcalifaciens DSM
           30120]
 gi|212687166|gb|EEB46694.1| hypothetical protein PROVALCAL_01221 [Providencia alcalifaciens DSM
           30120]
          Length = 203

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 6/194 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             L+  +  G  E           + + A   K  TE LE    ++ G+KS  + + G +
Sbjct: 2   ILLQFSSAQGPEECCIAVENAFACFVKEAALLKVNTELLESCPSKQ-GLKSVLIALDGIH 60

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A    +   G  +    SP     +R   F S+ ++     +    +  S+   +  ++ 
Sbjct: 61  AEKMAERWSGTIQWQCQSPLRPRHKRKNWFISVMMF-----TPIQPLENSEIEYEFTQSQ 115

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQHVN T SAVR  H+ TG+ V+ Q ERSQH NK  A  ++  KL E + Q+   + 
Sbjct: 116 GAGGQHVNKTCSAVRAKHVATGISVKVQSERSQHANKKLAKELIHWKLCEYQSQQLNTLD 175

Query: 297 NIGESSKTEIGWGR 310
                S  +I  G 
Sbjct: 176 KQRHLSHYQIERGN 189


>gi|294668973|ref|ZP_06734059.1| putative peptide chain release factor H [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308965|gb|EFE50208.1| putative peptide chain release factor H [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 205

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 61/194 (31%), Positives = 92/194 (47%), Gaps = 5/194 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
            YL++    G  E + +A  +L+     AE R  K E       ++ GI SA L+++G  
Sbjct: 2   IYLQISTAQGPAECRIFARFVLKKLLAEAEARNVKAEIAGETA-DKHGILSAVLILEGAA 60

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A    +  QG  + V  SP      R   +  I+  P   +      SES+    T R+ 
Sbjct: 61  ADTLAQSWQGTLQWVCASPVRPKHPRKNWYIGIFRLPEKPE----MPSESEIEFQTCRSG 116

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVN T+SAVR TH  +G+ V+ + ERSQH NK +A  +L  K+ E +  +  + A
Sbjct: 117 GKGGQHVNKTESAVRATHKASGISVRVESERSQHANKKRALELLAYKMAEHQTAQNADYA 176

Query: 297 NIGESSKTEIGWGR 310
               S   ++  G 
Sbjct: 177 KQQHSGLYQVERGN 190


>gi|183600289|ref|ZP_02961782.1| hypothetical protein PROSTU_03848 [Providencia stuartii ATCC 25827]
 gi|188020079|gb|EDU58119.1| hypothetical protein PROSTU_03848 [Providencia stuartii ATCC 25827]
          Length = 202

 Score = 71.0 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 6/194 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             L+  +  G  E        L  +   A+KR+     LE    +  G+KSA + ++G  
Sbjct: 1   MLLQFSSAQGPEECCIAVEKALACFFIEAKKREVMVNTLETVASKH-GLKSALVALEGHG 59

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A    +   G  +    SP     +R   F ++  +  +    E     SD   +  +A 
Sbjct: 60  AEELAQLWSGTIQWQCQSPLRPKHKRKNWFINVIRFSPIQTIEE-----SDIEFEFIKAQ 114

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVN T SAVR  H+ TG+ V+ Q ERSQH NK  A  ++  +L E + Q+   + 
Sbjct: 115 GPGGQHVNKTCSAVRAKHLATGISVKVQSERSQHANKKLAKQLIYWRLNEYQDQQASALN 174

Query: 297 NIGESSKTEIGWGR 310
               ++  +I  G 
Sbjct: 175 KQRHNAHYQIERGN 188


>gi|126737179|ref|ZP_01752914.1| putative peptide chain release factor [Roseobacter sp. SK209-2-6]
 gi|126721764|gb|EBA18467.1| putative peptide chain release factor [Roseobacter sp. SK209-2-6]
          Length = 213

 Score = 70.6 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 57/199 (28%), Positives = 82/199 (41%), Gaps = 3/199 (1%)

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
               + V +G+G  E Q     +L +     E      +        + G KSA +L+ G
Sbjct: 5   RHISVLVTSGSGPAECQQAVANVLNVMR--TEAELLAVDFDTNGARSKHGYKSAVVLVSG 62

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             A  + K  +G  +    S      +R   F  ++  P         I  SD  +DT+R
Sbjct: 63  AEAEAFAKNWRGTIQWRAQSNLRPKHKRANWFIGVFDLP-ASVRTPERIQASDVILDTFR 121

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           A G GGQH NTTDSAVR TH PTG+    ++ERSQH+NKA A   L+  +          
Sbjct: 122 AGGPGGQHQNTTDSAVRATHRPTGLSAVAREERSQHRNKALALERLQHLMAAQAAADEAA 181

Query: 295 IANIGESSKTEIGWGRQIR 313
                      +  G  +R
Sbjct: 182 QKASRNELHYALERGNPVR 200


>gi|239982310|ref|ZP_04704834.1| peptide chain release factor 1 [Streptomyces albus J1074]
 gi|291454154|ref|ZP_06593544.1| peptide chain release factor 1 [Streptomyces albus J1074]
 gi|291357103|gb|EFE84005.1| peptide chain release factor 1 [Streptomyces albus J1074]
          Length = 121

 Score = 70.6 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 3/123 (2%)

Query: 13  LFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           +F+  +  +   + +  +  DP +  +   A+ L +    L   +   +  +    D   
Sbjct: 1   MFEAVEELIGEHADIEKRLADPAVHADQAGARKLNKRYAELTPIVGTYRSWKQTGEDIET 60

Query: 72  LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
             EL    DD     E  +     +   E  +   +    +D  D  LE+ AGAGG ES 
Sbjct: 61  AREL--AADDPDFAAEVKELEAAREELTEKLRLLLVPRDPSDDKDVILEIKAGAGGDESA 118

Query: 132 DWA 134
            +A
Sbjct: 119 LFA 121


>gi|312891971|ref|ZP_07751474.1| peptide chain release factor H [Mucilaginibacter paludis DSM 18603]
 gi|311295602|gb|EFQ72768.1| peptide chain release factor H [Mucilaginibacter paludis DSM 18603]
          Length = 205

 Score = 70.2 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 49/202 (24%), Positives = 93/202 (46%), Gaps = 4/202 (1%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLI 172
                +++ +G G  E       + R+  + A++     + LE  + + +G   SAT++ 
Sbjct: 1   MEKMMIQITSGKGPAECCRVVACVQRLMLKQAKQFGVDIQVLENREADLSGTFLSATMMA 60

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G     + +  +G  R +  SPY    +R   F  +      D    ++ +  D +++T
Sbjct: 61  QGMQLEVFRREWEGTIRWIAQSPYRRYHQRKNWFVGV---AFFDIKQLMQWNPKDVKLET 117

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+SG GGQHVN  ++AVR TH+P+G+ V     RSQ +NK      L AK+   + ++ 
Sbjct: 118 TRSSGPGGQHVNKVETAVRGTHLPSGIQVMAMDSRSQLENKKLCLARLEAKIMVWQTEQL 177

Query: 293 EEIANIGESSKTEIGWGRQIRS 314
            E  +        +  G  +++
Sbjct: 178 MEQQHSQWLQHHALERGNPVKT 199


>gi|289806630|ref|ZP_06537259.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 97

 Score = 70.2 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 6/81 (7%)

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQ---IRSYVLQPYQMVKDLR 327
           K KA+A ++L A+++  E  KR++      + +  +G G +    R+Y   P   V D R
Sbjct: 2   KTKAKALSVLGARIHAAETAKRQQ--AEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHR 58

Query: 328 TNIEKTSPSDVLDGDLDDFMK 348
            N+      + ++G LD  ++
Sbjct: 59  INLTLYRLDETMEGKLDMLIE 79


>gi|209526204|ref|ZP_03274734.1| peptide chain release factor 1 [Arthrospira maxima CS-328]
 gi|209493301|gb|EDZ93626.1| peptide chain release factor 1 [Arthrospira maxima CS-328]
          Length = 98

 Score = 70.2 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 52/88 (59%), Gaps = 7/88 (7%)

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLR 327
           +   +A  +LRAKLY+++LQ+R+E   +    ++++G G    +IR+Y  +    + D R
Sbjct: 3   ELLERAIQILRAKLYDIKLQERQE--KVTSLRRSQVGTGARSEKIRTYNYKD-NRITDHR 59

Query: 328 TNIEKTSPSDVLDGDLDDFMKATLAIKK 355
              +  + +++LDGD+D  M+A ++  +
Sbjct: 60  LG-QNFTLANILDGDIDQVMEACISQDQ 86


>gi|255067533|ref|ZP_05319388.1| putative peptide chain release factor H [Neisseria sicca ATCC
           29256]
 gi|255048154|gb|EET43618.1| putative peptide chain release factor H [Neisseria sicca ATCC
           29256]
          Length = 219

 Score = 69.8 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 5/208 (2%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
            +  + +    YL++    G  E + +A  +L      A+    + E +     ++ G+ 
Sbjct: 3   RIKMKQNLQTIYLQISTAQGPAECRIFARFVLGRLLAEAKAESVEAEIISETA-DKHGMM 61

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISES 226
           SA L + G +A    +  QG  + +  SP      R   +  ++  P + D      SES
Sbjct: 62  SAVLKLDGKHAETLAQRWQGSLQWICASPVRPKHPRKNWYIGVFRMPDMPDM----PSES 117

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           +    + R+ G GGQHVN T+SAVR TH  +G+ V+ + ERSQH NK  A  +L  KL E
Sbjct: 118 EIEFQSCRSGGKGGQHVNKTESAVRATHKASGISVRVESERSQHANKKLALTLLTQKLAE 177

Query: 287 LELQKREEIANIGESSKTEIGWGRQIRS 314
               + +  A    S   ++  G   R+
Sbjct: 178 HHAGQTDNYARAQHSRLYQVERGNPKRT 205


>gi|325278153|ref|ZP_08143661.1| peptide chain release factor 2 [Pseudomonas sp. TJI-51]
 gi|324096712|gb|EGB95050.1| peptide chain release factor 2 [Pseudomonas sp. TJI-51]
          Length = 141

 Score = 69.8 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 64/140 (45%), Positives = 94/140 (67%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L   +  + ++ + L D   LL++A+EE+D   + +    L+ ++  +   +F  + SGE
Sbjct: 2   LAQVVETLDKLSNGLGDCQDLLDMAVEENDEGAVGDVVTELEGLEENLAQLEFRRMFSGE 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
            D N+AYL++ AG+GGTE+QDWAN+LLRMY RWA+KR F    +E+ +GE AGIK AT+ 
Sbjct: 62  MDMNNAYLDIQAGSGGTEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVH 121

Query: 172 IKGPNAYGWLKGEQGVHRLV 191
           IKG  A+GWL+ E GVHRLV
Sbjct: 122 IKGEYAFGWLRTEIGVHRLV 141


>gi|307943084|ref|ZP_07658429.1| putative peptide chain release factor H [Roseibium sp. TrichSKD4]
 gi|307773880|gb|EFO33096.1| putative peptide chain release factor H [Roseibium sp. TrichSKD4]
          Length = 217

 Score = 69.8 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 1/201 (0%)

Query: 110 GEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
               ++ A L V +G G  E +   +++L   T  A K +   E     +G      SA 
Sbjct: 5   CTDKTDTARLLVTSGDGPRECRRAVSLVLARITTEAAKLRVNVEETLSTEGPNQDPASAI 64

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           L + G +A    K   G  R    SP+  + +R   F  ++     +      +S SD +
Sbjct: 65  LRLSGKDASEIAKRWTGTIRWTCQSPFRPHHKRKNWFVGVFALA-TERDQTETLSPSDLK 123

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
            +T+RA G GGQH NTTDSAVR+TH+PTG+ V  + ERSQH+N+A A N L  +LY L  
Sbjct: 124 FETFRAGGPGGQHQNTTDSAVRLTHLPTGLSVVARDERSQHRNRAAALNRLHDRLYLLAA 183

Query: 290 QKREEIANIGESSKTEIGWGR 310
           +      +       ++  G 
Sbjct: 184 EADAGAKSSENLLHRQLERGN 204


>gi|221065979|ref|ZP_03542084.1| peptide chain release factor H [Comamonas testosteroni KF-1]
 gi|220711002|gb|EED66370.1| peptide chain release factor H [Comamonas testosteroni KF-1]
          Length = 195

 Score = 69.8 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 46/191 (24%), Positives = 79/191 (41%), Gaps = 7/191 (3%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +++ +  G  E +    + LR   +         E LE            ++L++     
Sbjct: 4   MQLSSAHGPAECEYALQLTLRKLLQACAAEDLAVEVLEEFRTPAG---YRSVLLRCERET 60

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             L+   G  + +  SP+     R   F ++       +       + + +  + +ASG 
Sbjct: 61  PALREWLGTIQWIFASPFRPRHPRKNWFVAVQRC----EPPRQLTMDGEIQFQSCKASGK 116

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVNTTDSAV   H+P+G+ V+   ERSQH NK  A  +L  KL     + + +   +
Sbjct: 117 GGQHVNTTDSAVHALHVPSGMAVKVMSERSQHANKQLARELLAIKLARHNARSQGQAQRL 176

Query: 299 GESSKTEIGWG 309
                 E+  G
Sbjct: 177 RSQQHREVERG 187


>gi|323355075|gb|EGA86905.1| Mrf1p [Saccharomyces cerevisiae VL3]
          Length = 201

 Score = 69.4 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 61/160 (38%), Positives = 84/160 (52%), Gaps = 8/160 (5%)

Query: 105 ESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA- 163
           + L         + LE+  G GG E+  +   LL MY  +A  RK+K   +  ++ E   
Sbjct: 33  KLLPPHPFADKPSLLELRPGVGGIEAMIFTQNLLDMYIGYANYRKWKYRIISKNENESGS 92

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSI---- 219
           GI  A L I+   +Y  L+ E GVHR+ RI   ++  R HTS +++ V P + D      
Sbjct: 93  GIIDAILSIEEAGSYDRLRFEAGVHRVQRIPSTETKGRTHTSTAAVVVLPQIGDESAKSI 152

Query: 220 ---EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIP 256
              E      + R+D  RASG GGQHVNTTDSAVR+THIP
Sbjct: 153 DAYERTFKPGEIRVDIMRASGKGGQHVNTTDSAVRLTHIP 192


>gi|149197057|ref|ZP_01874109.1| peptide chain release factor-like protein [Lentisphaera araneosa
           HTCC2155]
 gi|149139603|gb|EDM28004.1| peptide chain release factor-like protein [Lentisphaera araneosa
           HTCC2155]
          Length = 203

 Score = 69.4 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 81/197 (41%), Gaps = 4/197 (2%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD-GEEAGIKSATLLIKGPNA 177
           ++  +G G  E +     + +++ R AE    + E ++     E+   +S  + ++G   
Sbjct: 5   IQFSSGQGPRECERVLWHIFKIFCREAEDENIQCELIKAEKGSEKNSFRSLLISLEGNQL 64

Query: 178 YGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASG 237
               K  +G       SP+  + +R   F             + E+  S  + +  R SG
Sbjct: 65  ETLRKNWEGSLLWRAPSPFRPHHKRRNWFVQA---SFFAIPAKAELDLSQIKFEAQRGSG 121

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIAN 297
            GGQHVN   +A+R  + P  + + C +ERSQ++NK  A   +   L     QK  E + 
Sbjct: 122 PGGQHVNKCATAIRAYYAPLQLSILCNEERSQYRNKMLAMARVLEALNLHHSQKEGEESK 181

Query: 298 IGESSKTEIGWGRQIRS 314
                  ++  G   R+
Sbjct: 182 AQRQKHYQLERGNPCRT 198


>gi|71032615|ref|XP_765949.1| peptide chain release factor 1 [Theileria parva strain Muguga]
 gi|68352906|gb|EAN33666.1| peptide chain release factor 1, putative [Theileria parva]
          Length = 216

 Score = 69.4 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 48/153 (31%), Positives = 82/153 (53%), Gaps = 17/153 (11%)

Query: 183 GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDS-----------IEIEISESDCRID 231
            E GVH++ R+   + + R H+S +++ V P                  +EI+ SD    
Sbjct: 48  REGGVHQVKRVPMTEKSGRMHSSTATVAVLPSEMAKGRGTNNFEDVLEAVEINPSDIEWK 107

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
           T RASG GGQ+VN  ++AV + H PTG+ V+C +ERSQ KNK  A   LR ++  + +++
Sbjct: 108 TCRASGPGGQNVNKVETAVSLYHKPTGIKVECSEERSQGKNKELALKKLREEIARIRIEE 167

Query: 292 REEIANIGESSKTEIGWGRQIRSY-VLQPYQMV 323
               A +    K+++ +   I++Y  L  Y+++
Sbjct: 168 MFSEARVR--RKSQVHF---IQNYSTLHIYKLI 195


>gi|300693607|ref|YP_003749580.1| peptide chain release factor homolog protein [Ralstonia
           solanacearum PSI07]
 gi|299075644|emb|CBJ34941.1| putative peptide chain release factor homolog protein [Ralstonia
           solanacearum PSI07]
          Length = 207

 Score = 69.1 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 54/195 (27%), Positives = 82/195 (42%), Gaps = 6/195 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L+  +  G  E +      L    R + +   + E +E  DGE  G  +SA + ++G 
Sbjct: 2   ILLQFSSAQGPVECELAVVKALAYLQRESAQAGVRVEVIEQEDGERPGTLRSALVSLEGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
                 +  +G  +    SPY     R   F  +        +       S+ R +T R+
Sbjct: 62  AEAAAAQRWEGTIQWTSPSPYRPRHARKNWFFGVARC-----ATPAVTLPSEIRFETTRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN T+SAVR  H+ TG+ V+ Q ERSQH NK  A  +L  KL   +       
Sbjct: 117 SGPGGQHVNKTESAVRAIHMATGISVKVQTERSQHANKRLAVLLLAHKLASHDEAMNAAQ 176

Query: 296 ANIGESSKTEIGWGR 310
                +   ++  G 
Sbjct: 177 RAQRRTLHRQVERGN 191


>gi|225023353|ref|ZP_03712545.1| hypothetical protein EIKCOROL_00211 [Eikenella corrodens ATCC
           23834]
 gi|224943831|gb|EEG25040.1| hypothetical protein EIKCOROL_00211 [Eikenella corrodens ATCC
           23834]
          Length = 204

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 62/194 (31%), Positives = 84/194 (43%), Gaps = 5/194 (2%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
            YL++    G  E Q +A   L+   R AE    + E LE    +  GI SA L + G  
Sbjct: 2   IYLQISTAQGPAECQMFARFALQKILREAEAAGVEAEILEQTPSKH-GILSAVLKLSGSR 60

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A     G QG  + V  SP      R   +  ++  P     I            T RA 
Sbjct: 61  AESLATGWQGTLQWVCPSPLRPQHPRKNWYIGVFRLP----EIPALPESEGIEFQTCRAG 116

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVN T+SAVR  H+ +G+ V+ + ERSQH NK +A  +L  KL E       + A
Sbjct: 117 GKGGQHVNKTESAVRAVHLASGIAVRAEGERSQHANKKRALGLLALKLAEHHQTALRQHA 176

Query: 297 NIGESSKTEIGWGR 310
                S  ++  G 
Sbjct: 177 ADAHKSLYQVERGN 190


>gi|268592903|ref|ZP_06127124.1| putative peptide chain release factor H [Providencia rettgeri DSM
           1131]
 gi|291311693|gb|EFE52146.1| putative peptide chain release factor H [Providencia rettgeri DSM
           1131]
          Length = 203

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 56/194 (28%), Positives = 86/194 (44%), Gaps = 6/194 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             L+  +  G  E        L  + + A+K     + LE       G+KSA + ++G N
Sbjct: 2   ILLQFSSAQGPEECCIAVEKALACFFQEAKKLSVIADTLEFFPSRY-GLKSALISLEGEN 60

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A    +   G  +    S      +R   F S+  +  +    +     S+   +  +A 
Sbjct: 61  AEILSQKWTGTIQWQCQSQIRPRHKRKNWFLSVTRFSPIKPIED-----SEIEFEFTKAQ 115

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           GAGGQHVN T SAVR  H+ TG+ V+ Q ERSQH NK  A  +++ KL E + Q+  E+ 
Sbjct: 116 GAGGQHVNKTSSAVRAKHVATGITVKVQSERSQHANKKLAKQLIQWKLNEHQSQQLNELD 175

Query: 297 NIGESSKTEIGWGR 310
                S  +I  G 
Sbjct: 176 KQRHHSHYQIERGN 189


>gi|167948499|ref|ZP_02535573.1| hypothetical protein Epers_18991 [Endoriftia persephone
           'Hot96_1+Hot96_2']
 gi|110589280|gb|ABG77149.1| hypothetical protein [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 153

 Score = 69.1 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 64/128 (50%), Positives = 83/128 (64%)

Query: 95  IKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEA 154
            +  +   +F  + SGE D ++A+L++ AG+GGTE+QDWA MLLRMY RW E   FKTE 
Sbjct: 2   FEQRIAELEFRRMFSGEMDPSNAFLDIQAGSGGTEAQDWAEMLLRMYLRWGEAHGFKTEL 61

Query: 155 LEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPV 214
           +E   GE AGIKSAT+  +G  A+GWL+ E GVHRLVR SP+DS +RRHTSFS+      
Sbjct: 62  MEASPGEVAGIKSATIRFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFSASVCLAG 121

Query: 215 VDDSIEIE 222
                   
Sbjct: 122 NRRLDRDR 129


>gi|253689801|ref|YP_003018991.1| peptide chain release factor H [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251756379|gb|ACT14455.1| peptide chain release factor H [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 207

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 6/195 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L++ A  G  E        L+   + A ++  + E +E  +G+ +G  +SA +L+ G 
Sbjct: 2   ILLQLSAAQGPDECMLATAKALQALIQDAARQGIECEIIETEEGKRSGTLRSALVLLNGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
                     G  +    SP+     R   F  +  +       E   ++++ R +  ++
Sbjct: 62  RTEPLAASWCGTLQWTCNSPWRKGGGRKNWFIGVARF-----HQEQAFADNEIRFEATKS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN T+SAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L  L+ Q+  E+
Sbjct: 117 SGPGGQHVNKTESAVRATHVASGITVKVQSERSQHANKRLACYLIAYRLKALQQQQHAEL 176

Query: 296 ANIGESSKTEIGWGR 310
                    +I  G 
Sbjct: 177 RAQRRLFHHQIERGN 191


>gi|69249982|ref|ZP_00605073.1| PCRF [Enterococcus faecium DO]
 gi|68194043|gb|EAN08594.1| PCRF [Enterococcus faecium DO]
          Length = 139

 Score = 68.3 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 71/134 (52%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W +   A+ ++ E             + + L +  +++E+  EE D ++ +E  
Sbjct: 1   MAEPGFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVEMLQEEPDAAMQEEAE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRK 149
             +  +  +++  +   LL G  D N+A +E+H GAGGTESQDW +MLLRMYTRWAE+  
Sbjct: 61  TRINALDEKMKTYELSMLLDGPYDRNNAIVELHPGAGGTESQDWGSMLLRMYTRWAEQHG 120

Query: 150 FKTEALEIHDGEEA 163
           ++ E L+    +  
Sbjct: 121 YQVETLDYQKSQXG 134


>gi|46203521|ref|ZP_00208999.1| COG1186: Protein chain release factor B [Magnetospirillum
           magnetotacticum MS-1]
          Length = 51

 Score = 68.3 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/38 (65%), Positives = 31/38 (81%)

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIK 354
           LQPYQ+VKDLRT  + T P +VLDGDLD FM+A+LA +
Sbjct: 2   LQPYQLVKDLRTGTQSTDPDEVLDGDLDPFMEASLAQR 39


>gi|323486906|ref|ZP_08092222.1| hypothetical protein HMPREF9474_03973 [Clostridium symbiosum
           WAL-14163]
 gi|323691951|ref|ZP_08106201.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673]
 gi|323399769|gb|EGA92151.1| hypothetical protein HMPREF9474_03973 [Clostridium symbiosum
           WAL-14163]
 gi|323504009|gb|EGB19821.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673]
          Length = 197

 Score = 68.3 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 78/199 (39%), Gaps = 12/199 (6%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             +++ +G G  E +  A +  R   +     +              G K+         
Sbjct: 1   MRIQISSGQGPAECELAAELFYRQLQKEIGDIRMV--------QCVRGSKAKGFSSVIFE 52

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
               +   +G    V  SPY    +R   +  + +     +++     E   R +T+R+ 
Sbjct: 53  TEEDMSSLEGSILWVCKSPYRPKHKRKNWYIDVSIL----ENMPKLTQELKLRFETFRSG 108

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ+VN  ++ VR+ HIPTG+ V   + RSQH NK  A N L   L E  ++   +  
Sbjct: 109 GKGGQNVNKVETGVRVIHIPTGISVVSTEARSQHMNKKLAVNRLCDILAERNMESGRKEK 168

Query: 297 NIGESSKTEIGWGRQIRSY 315
            +       +  G  +R Y
Sbjct: 169 ELAWLEHNRLERGNPVRIY 187


>gi|89093039|ref|ZP_01165990.1| peptide chain release factor 2 [Oceanospirillum sp. MED92]
 gi|89082689|gb|EAR61910.1| peptide chain release factor 2 [Oceanospirillum sp. MED92]
          Length = 207

 Score = 67.9 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 9/201 (4%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE-AGIKSATLLIKGP 175
             L++ AG G  E      + L+   + A+ +    + +     E+  G KS  L     
Sbjct: 2   ILLQLSAGQGPDECAYAVGLALKQLDKDAKAQAVSIKLISGTPSEKRGGYKSLLLQCDAD 61

Query: 176 NAYG---WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +      + +  QGV   +  SP+    +R   F S  VY      I  E ++ +    T
Sbjct: 62  SPQRAKQFAETWQGVLLWICQSPFRPKHKRKNWFFSGQVY-----EIAEETNDGEITYQT 116

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASGAGGQHVNTTDSAVR TH+ +G+ V+ + ERSQH NK  A  ++  KL E   +++
Sbjct: 117 CRASGAGGQHVNTTDSAVRATHVSSGISVRVESERSQHANKRLAKLLILQKLAEQVREEQ 176

Query: 293 EEIANIGESSKTEIGWGRQIR 313
             +         E+  G   R
Sbjct: 177 SRLDKAHWLQHQELERGNPAR 197


>gi|160935130|ref|ZP_02082513.1| hypothetical protein CLOBOL_00025 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441861|gb|EDP19558.1| hypothetical protein CLOBOL_00025 [Clostridium bolteae ATCC
           BAA-613]
          Length = 198

 Score = 67.9 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 12/199 (6%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             +++ +G G  E +    ML     + A   +          G   G K   +      
Sbjct: 1   MRVQISSGQGPAECELAVAMLYEELRKEAGDVRLV--------GCTPGKKPGCMSSVVFE 52

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
               L+  +G  + +  SPY    RR   +  + +   V    E  +     R +T+R+ 
Sbjct: 53  TDRDLRELEGSVQWICKSPYRPGHRRKNWYVDVSILDQVPRISEERM----VRFETFRSG 108

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVN  ++ VR  HIPTG  V   Q RSQH NK  A + L + L E+  + +++  
Sbjct: 109 GKGGQHVNKVETGVRAIHIPTGTAVVSTQARSQHMNKQIAMDRLCSILAEMNARNQQKEK 168

Query: 297 NIGESSKTEIGWGRQIRSY 315
           ++       +  G  +R Y
Sbjct: 169 SLAWMEHARLERGNPVRIY 187


>gi|264679478|ref|YP_003279385.1| class I peptide chain release factor [Comamonas testosteroni CNB-2]
 gi|262209991|gb|ACY34089.1| Class I peptide chain release factor [Comamonas testosteroni CNB-2]
          Length = 195

 Score = 67.5 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 47/194 (24%), Positives = 80/194 (41%), Gaps = 7/194 (3%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +++ +  G  E +    + LR   +         E LE            ++L++     
Sbjct: 4   MQLSSAHGPAECEYALQLTLRKLLQACAAEDLAVEVLEEFRTPAG---YRSVLLRCERET 60

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             L+   G  + +  SP+     R   F ++               + + +  + +ASG 
Sbjct: 61  PALREWLGTIQWIFASPFRPRHPRKNWFVAVQRCEPPRQLAM----DGEIQFQSCKASGK 116

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVNTTDSAV   H+P+G+ V+   ERSQH NK  A  +L  KL +   +   +   +
Sbjct: 117 GGQHVNTTDSAVHALHVPSGIAVKVMSERSQHANKRLARELLAIKLAQHNARSEGQAQRL 176

Query: 299 GESSKTEIGWGRQI 312
                 E+  G+ I
Sbjct: 177 RSQQHWEVERGQAI 190


>gi|225390312|ref|ZP_03760036.1| hypothetical protein CLOSTASPAR_04065 [Clostridium asparagiforme
           DSM 15981]
 gi|225043636|gb|EEG53882.1| hypothetical protein CLOSTASPAR_04065 [Clostridium asparagiforme
           DSM 15981]
          Length = 196

 Score = 67.5 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 49/202 (24%), Positives = 78/202 (38%), Gaps = 15/202 (7%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
             D  +++ +G G  E +    +  +   R  E    + + +    G   G  S  L   
Sbjct: 1   MADMRIQISSGQGPEECELAVGLFYQALRREVE----EIQMVSCVKGRRGGFSSVVLEAD 56

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
                G           V  SP     +R   +  + +     + I     E   R +T+
Sbjct: 57  WSGLEG-------SVLWVCKSPLRPGHKRKNWYIDVSIL----EEIPRTSKEMQVRFETF 105

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R+ G GGQ+VN  ++ VR+ HIPTG+ V   + RSQH NK  A N L   L + +LQ   
Sbjct: 106 RSGGKGGQNVNKVETGVRVVHIPTGIAVVSTEARSQHMNKQIALNRLCDILADRDLQCAR 165

Query: 294 EIANIGESSKTEIGWGRQIRSY 315
               +       +  G  +R Y
Sbjct: 166 REKELAWMEHNRLERGNPVRIY 187


>gi|330467788|ref|YP_004405531.1| peptide chain release factor-like protein [Verrucosispora maris
           AB-18-032]
 gi|328810759|gb|AEB44931.1| peptide chain release factor-like protein [Verrucosispora maris
           AB-18-032]
          Length = 202

 Score = 67.1 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 49/200 (24%), Positives = 74/200 (37%), Gaps = 3/200 (1%)

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIK 173
               L + AG G  E       LLR     A +++ +   ++   G+  G  +S  + + 
Sbjct: 1   MTVRLLLSAGRGPQECAWALAHLLRRLEAEAARQRLRVHRVDTVAGDRPGTYRSVLVEVG 60

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G     +     G       SPY +   R   + +    P   D       ESD  +   
Sbjct: 61  GAGVEAFAASWTGTLCWQAPSPYRAGVGRKNWYVTAQ--PCPADPDATCFEESDVEVVAC 118

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R  G GGQH N   +AVR TH PTG+VV    ER    N+  A  +LR +L   +     
Sbjct: 119 RTGGPGGQHRNKVSTAVRATHRPTGLVVVVDTERQFSLNRRIALRLLRQRLANRDETAVR 178

Query: 294 EIANIGESSKTEIGWGRQIR 313
           +           +  G  +R
Sbjct: 179 DATTARWQLHDRLVRGDPVR 198


>gi|331001770|ref|ZP_08325292.1| peptide chain release factor H [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330412744|gb|EGG92127.1| peptide chain release factor H [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 200

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 53/199 (26%), Positives = 82/199 (41%), Gaps = 9/199 (4%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             L++ AG G  E Q     + R   +                   AG +  T L     
Sbjct: 1   MILQLSAGMGPVECQRAVFGICRELMKEI--------PSPEILNYVAGAEDETFLSVMLY 52

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           +   +   +G    +  S Y    +R   F  + + P   +  E   SE+D RI+ + A+
Sbjct: 53  SKQDVSYLEGSMLWICKSKYRPWHKRKNWFIDVSIIPETTEMEEN-FSENDLRIEKFHAN 111

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ+VN  ++ VR+ HIP+G+ V   +ERSQ  NK  A   L   L      ++ +  
Sbjct: 112 GPGGQNVNKVETGVRVIHIPSGIRVSSTRERSQLLNKKDAIRKLAIVLKSRNDFEKVKSR 171

Query: 297 NIGESSKTEIGWGRQIRSY 315
           N   S  +EI  G  +R Y
Sbjct: 172 NNAWSKHSEIVRGNPVRIY 190


>gi|207109871|ref|ZP_03244033.1| peptide chain release factor 2 [Helicobacter pylori HPKX_438_CA4C1]
          Length = 130

 Score = 66.4 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 74/113 (65%), Positives = 90/113 (79%)

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA++L RMY RWAE+R FK+E L+  DGEEAGIK    +IKG NAYG+LK E GVHRLVR
Sbjct: 1   WASILYRMYLRWAERRGFKSEILDYQDGEEAGIKGVAFIIKGENAYGYLKNESGVHRLVR 60

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNT 245
           ISP+D+N++RHTSF+S+ + P +DD I+IEI E D R D YRASGAGGQHVN 
Sbjct: 61  ISPFDANAKRHTSFASVQISPELDDDIDIEIDEKDVRYDYYRASGAGGQHVNK 113


>gi|269119386|ref|YP_003307563.1| peptide chain release factor H [Sebaldella termitidis ATCC 33386]
 gi|268613264|gb|ACZ07632.1| peptide chain release factor H [Sebaldella termitidis ATCC 33386]
          Length = 206

 Score = 66.0 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 2/194 (1%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             + + +G G  E +       +   +   K   +   +E   G +A     +++++   
Sbjct: 1   MRMIISSGNGPQECEKAVYEYFKYLKKEFAKYNIEYRYIESEAGNKA-KTFRSVVLQIKE 59

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
              +     G    +  S Y  N RR   +    V    ++ +   IS+    I T R+S
Sbjct: 60  NTKFTNIYTGTILWINESIYRKNHRRKNWYIKS-VLIKENEFLNKSISKKTTEITTMRSS 118

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ+VN  ++AVRI HIPTG+ +  ++ER+Q+ NK  A   L  KL  +E+  ++E  
Sbjct: 119 GNGGQNVNKLETAVRIKHIPTGISIVSREERTQYANKKAAVKKLEEKLTNMEIYHQKEEE 178

Query: 297 NIGESSKTEIGWGR 310
               S K EI  G 
Sbjct: 179 MKIWSVKNEIERGN 192


>gi|301631891|ref|XP_002945028.1| PREDICTED: hypothetical protein LOC100485311 [Xenopus (Silurana)
           tropicalis]
          Length = 782

 Score = 66.0 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 51/189 (26%), Positives = 71/189 (37%), Gaps = 2/189 (1%)

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGE 184
               E +    + LR   R A+         +                    A  WL   
Sbjct: 589 VRPAECERAVAITLRALLRDAQAHAIALAVAQEVATAAGFKSVLLQGAASAAALQWLATW 648

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
           QG  + V  SP+    RR   F    V           + +        RASG GGQHVN
Sbjct: 649 QGSVQCVFTSPWRPGHRRKNWFVG--VQRCAAPETVAGLDDGAIVYQACRASGKGGQHVN 706

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAV   H+ +G+ V+   ERSQH NK  A  ++  +L E +  + E+         T
Sbjct: 707 TTDSAVHALHLASGIAVKVMGERSQHANKRLARALIALRLAERQTAQAEDAGRQRRLQHT 766

Query: 305 EIGWGRQIR 313
            +  GR +R
Sbjct: 767 AVQRGRPVR 775


>gi|162455289|ref|YP_001617656.1| putative peptide chain release factor homolog protein [Sorangium
           cellulosum 'So ce 56']
 gi|161165871|emb|CAN97176.1| putative peptide chain release factor homolog protein [Sorangium
           cellulosum 'So ce 56']
          Length = 222

 Score = 66.0 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 7/207 (3%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
            + +++++ AG G  E + +   L        ++R      + +H  E+A    +  ++ 
Sbjct: 1   MSRSWVQISAGRGPIEVRRFVARLAERMEALCQERGLAVVDVTLHGDEDAPA--SVEILV 58

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV-----YPVVDDSIEIEISESDC 228
             +A   L+GE G H LV  S     + R   F+ + +              + +   + 
Sbjct: 59  EGDARRCLEGELGTHALVERSAARGKAARKRWFAGVAIHAAGADAGAGAGEGVGVDLREL 118

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
            I   RASG GGQHVN T SAVRI H P+G+ V+   ERSQ  N  +    +  +L E  
Sbjct: 119 EISACRASGPGGQHVNKTLSAVRIHHRPSGITVRVADERSQRANVRRGVERIAERLAERA 178

Query: 289 LQKREEIANIGESSKTEIGWGRQIRSY 315
            ++  E      S    I  G  +R+Y
Sbjct: 179 ARRVAEGEAARWSEHDRIVRGEPVRTY 205


>gi|220679233|emb|CAX12804.1| novel protein similar to H.sapiens MTRF1L, mitochondrial
           translational release factor 1-like (MTRF1L) [Danio
           rerio]
          Length = 273

 Score = 65.6 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 6/166 (3%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L + +  IK+++ +  +   + +L  + D           L   + E      + L   E
Sbjct: 110 LAHLVHNIKKLEVKQKEMEDMQDLLKDNDP------ELLELAETEKEAVLADIQDLRQKE 163

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
           +D ++  LEV AG GG E+  +   +  MY  +A    +  + LE +  E  G++ A+  
Sbjct: 164 SDMSELVLEVSAGVGGQEAMLFTAEIFEMYQNYAAFNGWSFDVLEANASELGGVRHASAS 223

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDD 217
           + GP +Y  LK E GVHR+ R+   +S  R HTS  ++ + P   +
Sbjct: 224 VSGPLSYKKLKFEAGVHRVQRVPKTESKGRTHTSTMTVAILPQPTE 269


>gi|213161326|ref|ZP_03347036.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
          Length = 42

 Score = 65.6 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 1/41 (2%)

Query: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           RSYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 1   RSYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 40


>gi|239835036|ref|ZP_04683364.1| Peptide chain release factor 2 [Ochrobactrum intermedium LMG 3301]
 gi|239823099|gb|EEQ94668.1| Peptide chain release factor 2 [Ochrobactrum intermedium LMG 3301]
          Length = 136

 Score = 65.6 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 1/134 (0%)

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
               + LV  SP     +R   F S+        +  + I  +D R +T RA G GGQH 
Sbjct: 4   WLTRYLLVFKSPVRPQHKRQHWFISVSRIARPAINDIV-IQPNDVRFETLRAGGPGGQHQ 62

Query: 244 NTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           NT+DSAVR+ HIPTG+ +  + ERSQH+NKA A   L   L  L+  + E    +     
Sbjct: 63  NTSDSAVRVVHIPTGIQLIARNERSQHRNKATALERLEMVLKHLQEDEIENAEAVRHHEN 122

Query: 304 TEIGWGRQIRSYVL 317
             I  G +++++  
Sbjct: 123 RNIERGNEVKTFRF 136


>gi|281414236|ref|ZP_06245978.1| peptide chain release factor 2 [Micrococcus luteus NCTC 2665]
          Length = 107

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 44/95 (46%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L   L  +  + D D     ++ L  +   P LW +  EA+ +  +  H    +  I  +
Sbjct: 13  LRHTLASIEQVSDLDRIKADIAELEQQASAPDLWDDPEEAQKVTSKLSHRQTDLKRITSL 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKL 97
           + R+ D   ++ELA EED+ S+L + +  L  I+ 
Sbjct: 73  ESRIEDLETMVELAAEEDEPSLLDDANQELTSIRK 107


>gi|331645440|ref|ZP_08346544.1| putative peptide chain release factor H [Escherichia coli M605]
 gi|331045602|gb|EGI17728.1| putative peptide chain release factor H [Escherichia coli M605]
          Length = 232

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 6/204 (2%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATL 170
            +     L++ +  G  E        L    + A ++      LE   G  +  ++SA +
Sbjct: 25  REKRMILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALI 84

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            + G NA+   +   G  + +  SPY  +  R   F  I        + + +        
Sbjct: 85  SLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIHY 139

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +
Sbjct: 140 ETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQE 199

Query: 291 KREEIANIGESSKTEIGWGRQIRS 314
               + +       +I  G   R+
Sbjct: 200 NSAALKSQRRMFHHQIERGNPRRT 223


>gi|317491073|ref|ZP_07949509.1| RF-1 domain-containing protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920620|gb|EFV41943.1| RF-1 domain-containing protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 205

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 6/198 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL-LIKGP 175
             L++ +  G  E      + L+   + A     K    E      AG   + L  + G 
Sbjct: 2   ILLQISSAQGPDECALAVALALKQLQKEAAALGVKVTVAEQEPARRAGTLRSVLLSLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A        G  +    SP+   + R   F  +          E  + E + + ++ ++
Sbjct: 62  AAEHISNTWCGTLQWTCESPWRGGNGRKNWFIGV-----ARYCFEDVVIEGEIKFESLKS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN T+SA+R TH+ +G+VV+ Q ERSQH NK  A  ++  KL + +   + EI
Sbjct: 117 SGPGGQHVNKTESAIRATHLASGIVVKVQTERSQHANKRLAKLLIAHKLEQQQQNMQSEI 176

Query: 296 ANIGESSKTEIGWGRQIR 313
                    +I  G  +R
Sbjct: 177 KAQRRMFHHQITRGNPVR 194


>gi|227357000|ref|ZP_03841372.1| peptide chain release factor [Proteus mirabilis ATCC 29906]
 gi|227162878|gb|EEI47837.1| peptide chain release factor [Proteus mirabilis ATCC 29906]
          Length = 203

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 54/194 (27%), Positives = 79/194 (40%), Gaps = 6/194 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             L+  +  G  E        L  +    E+R+     LE       G+KS  + +KG  
Sbjct: 1   MLLQFSSAQGPEECCIAVEKTLNYFLTVTEQRQVDVIILEQEPSRY-GLKSVLVSLKGAE 59

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A    +   G  +    S      +R   F  I            EI +++   +T RA+
Sbjct: 60  AKAIAQQWSGTVQWQCTSTLRPKHKRKNWFIGI-----AYFEPPQEIQDTEILFETMRAN 114

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVN T SAVR THI TG+ V+ Q +RSQH NK  A  ++   L     Q++    
Sbjct: 115 GPGGQHVNKTSSAVRATHIATGISVKIQSQRSQHANKKLAKQLIAWHLNHYLSQQQASFN 174

Query: 297 NIGESSKTEIGWGR 310
           N    +   +  G 
Sbjct: 175 NQRHLAHHRVIRGN 188


>gi|266622646|ref|ZP_06115581.1| putative peptide chain release factor H [Clostridium hathewayi DSM
           13479]
 gi|288865627|gb|EFC97925.1| putative peptide chain release factor H [Clostridium hathewayi DSM
           13479]
          Length = 206

 Score = 64.4 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/199 (23%), Positives = 77/199 (38%), Gaps = 12/199 (6%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             +++ +G G  E +    +L     R A   +  +           G K          
Sbjct: 1   MRIQISSGQGPAECELAVGLLYEELKREAPDIRLLSFTQ--------GKKREGFSSIMFE 52

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
                   +G    +  SPY    +R   +  + +     +++     E   R +T+++ 
Sbjct: 53  TEHDFTSLEGSVLWICKSPYRPEHKRKNWYVDVSIL----ETVPRVTEEKLVRFETFKSG 108

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ+VN  ++ VR  HIPTG  V   + RSQH NK  A N L   L E+ L+      
Sbjct: 109 GKGGQNVNKVETGVRAIHIPTGTAVVSTEARSQHMNKQAALNRLCEILAEMNLESGRREK 168

Query: 297 NIGESSKTEIGWGRQIRSY 315
           N+     T +  G  +R Y
Sbjct: 169 NLAWMEHTRLERGNPVRVY 187


>gi|170684096|ref|YP_001742396.1| peptide chain release factor-like protein [Escherichia coli
           SMS-3-5]
 gi|170521814|gb|ACB19992.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli SMS-3-5]
          Length = 204

 Score = 64.4 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 6/199 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G     ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAITVLETEAGRYPDTMRSALISLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I        + + +      R +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAAL 176

Query: 296 ANIGESSKTEIGWGRQIRS 314
            +       +I  G   R+
Sbjct: 177 KSQRRMFHHQIERGNPRRT 195


>gi|330910076|gb|EGH38586.1| hypothetical protein ECAA86_00359 [Escherichia coli AA86]
          Length = 204

 Score = 64.4 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 6/199 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G  +  ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALISLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I        + + +        +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIHYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAAL 176

Query: 296 ANIGESSKTEIGWGRQIRS 314
            +       +I  G   R+
Sbjct: 177 KSQRRMFHHQIERGNPRRT 195


>gi|117622538|ref|YP_851451.1| peptide chain release factor-like protein [Escherichia coli APEC
           O1]
 gi|115511662|gb|ABI99736.1| peptide chain release factor-like protein [Escherichia coli APEC
           O1]
          Length = 232

 Score = 64.4 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 6/204 (2%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATL 170
            +     L++ +  G  E        L    + A ++      LE   G  +  ++SA +
Sbjct: 25  REKRMILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALI 84

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            + G NA+   +   G  + +  SPY  +  R   F  I        + + +      R 
Sbjct: 85  SLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRY 139

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +
Sbjct: 140 ETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQE 199

Query: 291 KREEIANIGESSKTEIGWGRQIRS 314
               + +       +I  G   R+
Sbjct: 200 NSAALKSQRRMFHHQIERGNPRRT 223


>gi|163754646|ref|ZP_02161768.1| putative peptide chain release factor [Kordia algicida OT-1]
 gi|161325587|gb|EDP96914.1| putative peptide chain release factor [Kordia algicida OT-1]
          Length = 198

 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 7/191 (3%)

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
           N  ++++ +G+G  E       L    +R         E +         +         
Sbjct: 3   NQFWVQISSGSGPEECCLAVKYLTEKLSRLPNYTFNVIELVATKYQNYKSVWLRATG--- 59

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
            ++  +    QG  + +  SPY ++ +R   F  + VY +     +I  S  + ++ T R
Sbjct: 60  -DSAEFKNHWQGSIQFIFRSPYRAHHQRKNWFVDVKVYVMPT---QISWSPKEIQVKTAR 115

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           +SGAGGQHVN  ++AV + HIPTG+ VQ  +ERSQ  NK  A+  L   +     +++  
Sbjct: 116 SSGAGGQHVNKVETAVSMIHIPTGITVQASEERSQFLNKKLAFARLDIAIKAQNQKQQNA 175

Query: 295 IANIGESSKTE 305
           I         +
Sbjct: 176 IEKQKWMQHKQ 186


>gi|293403381|ref|ZP_06647472.1| prfH [Escherichia coli FVEC1412]
 gi|293408390|ref|ZP_06652229.1| peptide chain release factor H [Escherichia coli B354]
 gi|298378993|ref|ZP_06988874.1| prfH [Escherichia coli FVEC1302]
 gi|300898963|ref|ZP_07117256.1| putative peptide chain release factor H [Escherichia coli MS 198-1]
 gi|59889806|emb|CAH19162.1| Probable peptide chain release factor [Escherichia coli]
 gi|284920069|emb|CBG33127.1| putative peptide chain release factor [Escherichia coli 042]
 gi|291429234|gb|EFF02254.1| prfH [Escherichia coli FVEC1412]
 gi|291471568|gb|EFF14051.1| peptide chain release factor H [Escherichia coli B354]
 gi|298280106|gb|EFI21610.1| prfH [Escherichia coli FVEC1302]
 gi|300357405|gb|EFJ73275.1| putative peptide chain release factor H [Escherichia coli MS 198-1]
          Length = 204

 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 6/199 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G  +  ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAITVLETETGRYSDTLRSALISLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I        + + +      R +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAAL 176

Query: 296 ANIGESSKTEIGWGRQIRS 314
            +       +I  G   R+
Sbjct: 177 KSQRRMFHHQIERGNPRRT 195


>gi|302857242|ref|XP_002959826.1| hypothetical protein VOLCADRAFT_101339 [Volvox carteri f.
           nagariensis]
 gi|300254224|gb|EFJ39110.1| hypothetical protein VOLCADRAFT_101339 [Volvox carteri f.
           nagariensis]
          Length = 194

 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 55/102 (53%), Positives = 71/102 (69%), Gaps = 1/102 (0%)

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
            YG L  E GVHR+ R+   ++  R HTS  ++ V P   D +++++ + D RI+T RAS
Sbjct: 94  VYGTLLPESGVHRVQRVPVTEAQGRVHTSTVAVVVLPQ-ADEVDVKLRDEDLRIETMRAS 152

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           GAGGQHVN TDSAVRITH+PTG+VV CQ ERSQH N+A A  
Sbjct: 153 GAGGQHVNVTDSAVRITHVPTGLVVSCQNERSQHLNRAAALK 194


>gi|104779685|ref|YP_606183.1| peptide chain release factor-like protein [Pseudomonas entomophila
           L48]
 gi|95108672|emb|CAK13366.1| putative peptide chain release factor [Pseudomonas entomophila L48]
          Length = 206

 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 56/195 (28%), Positives = 75/195 (38%), Gaps = 6/195 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL-LIKGP 175
             L++ A  G  E        L      A+ +      LE   G   G   + L  + G 
Sbjct: 2   ILLQLSAAQGPDECALAVAKALLRLQAEADAQAVAVRILEEEPGPRRGTLRSVLLALDGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A        G  +    SPY     R   F     +             S+   +T R+
Sbjct: 62  QAERLADHWTGSLQWTCSSPYRPGHARKNWFFGGARFAPPAPE-----LASEIHFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVNTTDSAVR TH+ +GV V+ Q ERSQH NK  A  ++  +L +   Q   E+
Sbjct: 117 SGPGGQHVNTTDSAVRATHLASGVSVKVQSERSQHANKRLALLLIGQRLAQQAEQVDSEL 176

Query: 296 ANIGESSKTEIGWGR 310
                     I  G 
Sbjct: 177 RAERRLFHHRIERGN 191


>gi|301019126|ref|ZP_07183330.1| putative peptide chain release factor H [Escherichia coli MS 69-1]
 gi|300399385|gb|EFJ82923.1| putative peptide chain release factor H [Escherichia coli MS 69-1]
          Length = 204

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 6/199 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G  +  ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALVSLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I        + + +      R +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQKNSAAL 176

Query: 296 ANIGESSKTEIGWGRQIRS 314
            +       +I  G   R+
Sbjct: 177 KSQRRMFHHQIERGNPRRT 195


>gi|312964708|ref|ZP_07778959.1| putative peptide chain release factor H [Escherichia coli 2362-75]
 gi|312290729|gb|EFR18607.1| putative peptide chain release factor H [Escherichia coli 2362-75]
          Length = 204

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 6/199 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G  +  ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I        + + +      R +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAAL 176

Query: 296 ANIGESSKTEIGWGRQIRS 314
            +       +I  G   R+
Sbjct: 177 KSQRRMFHHQIERGNPRRT 195


>gi|237707745|ref|ZP_04538226.1| peptide chain release factor 2 [Escherichia sp. 3_2_53FAA]
 gi|306813274|ref|ZP_07447467.1| peptide chain release factor-like protein [Escherichia coli NC101]
 gi|91070898|gb|ABE05779.1| peptide chain release factor-like protein [Escherichia coli UTI89]
 gi|226898955|gb|EEH85214.1| peptide chain release factor 2 [Escherichia sp. 3_2_53FAA]
 gi|281177449|dbj|BAI53779.1| peptide chain release factor [Escherichia coli SE15]
 gi|294492701|gb|ADE91457.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli IHE3034]
 gi|305854037|gb|EFM54476.1| peptide chain release factor-like protein [Escherichia coli NC101]
 gi|307628262|gb|ADN72566.1| peptide chain release factor-like protein [Escherichia coli UM146]
 gi|315287746|gb|EFU47149.1| putative peptide chain release factor H [Escherichia coli MS 110-3]
 gi|320197281|gb|EFW71897.1| peptide chain release factor-like protein [Escherichia coli
           WV_060327]
 gi|323953122|gb|EGB48990.1| RF-1 domain-containing protein [Escherichia coli H252]
 gi|323958696|gb|EGB54397.1| RF-1 domain-containing protein [Escherichia coli H263]
 gi|324010206|gb|EGB79425.1| putative peptide chain release factor H [Escherichia coli MS 57-2]
          Length = 204

 Score = 64.1 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 6/199 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G  +  ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALISLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I        + + +      R +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAAL 176

Query: 296 ANIGESSKTEIGWGRQIRS 314
            +       +I  G   R+
Sbjct: 177 KSQRRMFHHQIERGNPRRT 195


>gi|191171385|ref|ZP_03032934.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli F11]
 gi|300991271|ref|ZP_07179531.1| putative peptide chain release factor H [Escherichia coli MS 200-1]
 gi|110342064|gb|ABG68301.1| putative peptide chain release factor [Escherichia coli 536]
 gi|190908319|gb|EDV67909.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli F11]
 gi|300305588|gb|EFJ60108.1| putative peptide chain release factor H [Escherichia coli MS 200-1]
 gi|324015571|gb|EGB84790.1| putative peptide chain release factor H [Escherichia coli MS 60-1]
          Length = 204

 Score = 64.1 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 6/199 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G  +  ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALISLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I        + + +      R +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLSSGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAAL 176

Query: 296 ANIGESSKTEIGWGRQIRS 314
            +       +I  G   R+
Sbjct: 177 KSQRRMFHHQIERGNPRRT 195


>gi|313226924|emb|CBY22069.1| unnamed protein product [Oikopleura dioica]
          Length = 394

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 67/285 (23%), Positives = 118/285 (41%), Gaps = 14/285 (4%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
             + L +N+     A  +D      + ++       E  +       + EA+  +  +E 
Sbjct: 69  YLNELSENVAKESDAEMKDLLQEEIKEAEERIGEIEEEVFDVLAEYETEEAEKANFVVE- 127

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
            AGAGG E+  +A  LL  Y  + E   +  E +   D E   +    +++ G NA+   
Sbjct: 128 -AGAGGDEAGIFARELLDHYLLFFEFMNWDYEQVN-RDEENGMLTEGHIVVSGLNAFNRN 185

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
             E GVHR+ RI    +  + HTS  ++ V P+++    I+I E +  I + R SG GGQ
Sbjct: 186 LAEAGVHRVARIPQNAT--KLHTSTCAVKVTPILERR-LIDIPEKELDISSCRGSGKGGQ 242

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI--- 298
            +NT  +   + HIP+G+      E  ++   A      + +L  +   +++        
Sbjct: 243 KINTVHARAVVKHIPSGITTT-YFEPGRNNTLAANIEKAKEELRSILQARQDAEFEREFL 301

Query: 299 --GESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
               S  T    G +IR+Y      +V D RT  +  +      G
Sbjct: 302 GFKNSMNTNFERGERIRNYSWS-NNIVTDYRTKRK-FNLQKYFSG 344


>gi|227538749|ref|ZP_03968798.1| peptide chain release factor family protein [Sphingobacterium
           spiritivorum ATCC 33300]
 gi|227241258|gb|EEI91273.1| peptide chain release factor family protein [Sphingobacterium
           spiritivorum ATCC 33300]
          Length = 170

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 55/171 (32%), Positives = 76/171 (44%), Gaps = 4/171 (2%)

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIK 173
            D  + V AG G  E       +++   + A     +   L+  +G   G   SA+L I 
Sbjct: 1   MDKIIGVTAGRGPEECSWVVAQVIKKIIQEAATFDVEVRVLDRQEGSINGTVISASLQIS 60

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G N   +     G  + +  S +  + +R   F  ++    +  S      E D      
Sbjct: 61  GENCMAFAALWTGTIQWIGKSDFRKSHKRKNWFIEVF---EIKQSASWIFDEKDVGYQAM 117

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           R+SGAGGQHVN   SAVR THIPTGV V     RSQH+NK  A   L+ KL
Sbjct: 118 RSSGAGGQHVNKVSSAVRATHIPTGVSVVSMDSRSQHQNKKIATKRLQKKL 168


>gi|324114895|gb|EGC08861.1| RF-1 domain-containing protein [Escherichia fergusonii B253]
          Length = 204

 Score = 63.7 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 6/199 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G  +  ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALVSLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I        + + +        +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIHYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL +   +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQRQENSAAL 176

Query: 296 ANIGESSKTEIGWGRQIRS 314
            +       +I  G   R+
Sbjct: 177 KSQRRMFHHQIERGNPRRT 195


>gi|323976247|gb|EGB71340.1| RF-1 domain-containing protein [Escherichia coli TW10509]
          Length = 204

 Score = 63.7 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 6/199 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G  +  ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I        + + +        +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTSDEQEQSDAIHYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL +   +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQRQENSAAL 176

Query: 296 ANIGESSKTEIGWGRQIRS 314
            +       +I  G   R+
Sbjct: 177 KSQRRMFHHQIERGNPRRT 195


>gi|299530560|ref|ZP_07043980.1| Class I peptide chain release factor [Comamonas testosteroni S44]
 gi|298721536|gb|EFI62473.1| Class I peptide chain release factor [Comamonas testosteroni S44]
          Length = 195

 Score = 63.7 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 76/191 (39%), Gaps = 7/191 (3%)

Query: 119 LEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAY 178
           +++ +  G  E +    + LR   +         + LE            ++L++     
Sbjct: 4   MQLSSAHGPAECEYALQLTLRKLLQACAAEDLAVKVLEESRTPAG---CRSVLLRCERET 60

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
             L+   G  + +  SP+     R   F ++               + + +  + +ASG 
Sbjct: 61  PALREWLGTIQWIFASPFRPRHPRKNWFVAVQRCEPPRQLAM----DGEIQFQSCKASGK 116

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVNTTDSAV   H+P+G+ V+   ERSQH NK  A  +L  KL +       +   +
Sbjct: 117 GGQHVNTTDSAVHALHVPSGIAVKVMSERSQHANKRLARELLAIKLAQHNALSEGQAQRL 176

Query: 299 GESSKTEIGWG 309
                  +  G
Sbjct: 177 RNQQHWGVERG 187


>gi|323965216|gb|EGB60674.1| RF-1 domain-containing protein [Escherichia coli M863]
 gi|327254578|gb|EGE66194.1| putative peptide chain release factor H [Escherichia coli STEC_7v]
          Length = 204

 Score = 63.7 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 6/199 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G  +  ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I        + + +        +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIHYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL +   +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGIRVKVQSERSQHANKRLARLLIAWKLEQQRQENSAAL 176

Query: 296 ANIGESSKTEIGWGRQIRS 314
            +       +I  G   R+
Sbjct: 177 KSQRRMFHHQIERGNPRRT 195


>gi|221133060|ref|XP_002169670.1| PREDICTED: similar to peptide chain release factor, putative,
           partial [Hydra magnipapillata]
          Length = 171

 Score = 63.7 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 69/166 (41%), Gaps = 8/166 (4%)

Query: 14  FD--WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           FD   +  V+R   L          ++  +   L +E   L +    I +++++  +   
Sbjct: 3   FDNKLNRLVERHIDLRDLLATHD-MKDAKDFAKLSKEYSDLTDIAEAIADLRNKQAEKND 61

Query: 72  LLELALEEDDCSILQETSDNLQRIK-----LEVEYKQFESLLSGEADSNDAYLEVHAGAG 126
           L  +  +    + +++ + +   +         +  +   L     D  +A LEV AG G
Sbjct: 62  LAAMLSDSSLDTEMKQLAQSDYDLLLEELPNIEQQIKVLLLPKDADDERNAILEVRAGTG 121

Query: 127 GTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           G E+  +A +L RMY R+A  + ++ E + + D     IK A+  I
Sbjct: 122 GEEAGLFAAVLFRMYQRYAANKGWRFEIIAMSDTGLGAIKEASASI 167


>gi|328852101|gb|EGG01250.1| hypothetical protein MELLADRAFT_92621 [Melampsora larici-populina
           98AG31]
          Length = 174

 Score = 63.7 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 50/183 (27%), Positives = 78/183 (42%), Gaps = 29/183 (15%)

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV----YPVVDDSI 219
           G++ A L IKG + Y  ++ E GVH +  +    + S  HTS +++ V        D   
Sbjct: 9   GLREAPLEIKGEDVYKRMRWEAGVHCVQCVPVMQNTSLVHTSTAAVIVLAFDPGNQDRQE 68

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
           E    + D R +T R+ G GGQHVN T+S VR+TH+P                  + + +
Sbjct: 69  EALFEDKDVRTETMRSQGVGGQHVNKTESVVRLTHVPNWNS--------------RVFMI 114

Query: 280 LRAKLYELELQKREEIANIGESSKTEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSPSDVL 339
           LRA L +L  Q+++         +        I   V      V D R  +       V+
Sbjct: 115 LRAILSDLRNQQKQVEERGLRLLQL-------I--CVF--QGRVTDHRIGLTLPRLHYVM 163

Query: 340 DGD 342
           +GD
Sbjct: 164 EGD 166


>gi|227884748|ref|ZP_04002553.1| peptide chain release factor family protein [Escherichia coli
           83972]
 gi|300977367|ref|ZP_07173858.1| putative peptide chain release factor H [Escherichia coli MS 45-1]
 gi|301045877|ref|ZP_07193064.1| putative peptide chain release factor H [Escherichia coli MS 185-1]
 gi|331656314|ref|ZP_08357276.1| putative peptide chain release factor H [Escherichia coli TA206]
 gi|331681653|ref|ZP_08382286.1| putative peptide chain release factor H [Escherichia coli H299]
 gi|26106678|gb|AAN78863.1|AE016756_46 Peptide chain release factor homolog [Escherichia coli CFT073]
 gi|222032084|emb|CAP74823.1| Peptide chain release factor homolog [Escherichia coli LF82]
 gi|227838349|gb|EEJ48815.1| peptide chain release factor family protein [Escherichia coli
           83972]
 gi|300302127|gb|EFJ58512.1| putative peptide chain release factor H [Escherichia coli MS 185-1]
 gi|300409892|gb|EFJ93430.1| putative peptide chain release factor H [Escherichia coli MS 45-1]
 gi|307552166|gb|ADN44941.1| peptide chain release factor-like protein [Escherichia coli ABU
           83972]
 gi|312944860|gb|ADR25687.1| peptide chain release factor-like protein [Escherichia coli O83:H1
           str. NRG 857C]
 gi|315295160|gb|EFU54495.1| putative peptide chain release factor H [Escherichia coli MS 153-1]
 gi|315300862|gb|EFU60084.1| putative peptide chain release factor H [Escherichia coli MS 16-3]
 gi|323191394|gb|EFZ76656.1| putative peptide chain release factor H [Escherichia coli RN587/1]
 gi|331054562|gb|EGI26571.1| putative peptide chain release factor H [Escherichia coli TA206]
 gi|331080855|gb|EGI52020.1| putative peptide chain release factor H [Escherichia coli H299]
          Length = 204

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 6/199 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G  +  ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVRKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALISLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I        + + +      R +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAAL 176

Query: 296 ANIGESSKTEIGWGRQIRS 314
            +       +I  G   R+
Sbjct: 177 KSQRRMFHHQIERGNPRRT 195


>gi|323938779|gb|EGB35025.1| RF-1 domain-containing protein [Escherichia coli E1520]
          Length = 185

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%)

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           + + G NA+   +   G  + +  SPY  +  R   F  I        + + +      R
Sbjct: 37  ISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAVR 91

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
            +T R+SG GGQHVN TDSAVR TH+ TG+ V+ Q ERSQH NK  A  ++  +L + + 
Sbjct: 92  YETLRSSGPGGQHVNKTDSAVRATHLATGISVKVQSERSQHANKRLARLLIAWRLEQQQQ 151

Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314
           +    + +       +I  G   R+
Sbjct: 152 ENSAALKSQRRMIHHQIERGNPRRT 176


>gi|300934927|ref|ZP_07149981.1| putative peptide chain release factor H [Escherichia coli MS 21-1]
 gi|300459833|gb|EFK23326.1| putative peptide chain release factor H [Escherichia coli MS 21-1]
          Length = 204

 Score = 63.3 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 6/199 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G  +  ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALISLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I        + + +      R +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNNTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAAL 176

Query: 296 ANIGESSKTEIGWGRQIRS 314
            +       +I  G   R+
Sbjct: 177 KSQRRMFHHQIERGNPRRT 195


>gi|289806047|ref|ZP_06536676.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 41

 Score = 63.3 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 1/40 (2%)

Query: 314 SYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAI 353
           SYVL     +KDLRT +E  +   VLDG LD F++A+L  
Sbjct: 1   SYVLDD-SRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 39


>gi|197287314|ref|YP_002153186.1| peptide chain release factor [Proteus mirabilis HI4320]
 gi|194684801|emb|CAR46873.1| probable peptide chain release factor [Proteus mirabilis HI4320]
          Length = 203

 Score = 62.9 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 53/194 (27%), Positives = 78/194 (40%), Gaps = 6/194 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             L+  +  G  E        L  +    E+R+     LE       G+KS  + +KG  
Sbjct: 1   MLLQFSSAQGPEECCIAVEKTLNYFLTVTEQRQVDVIILEQEPSRY-GLKSVLVSLKGAE 59

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A    +   G  +    S      +R   F  I            EI +++   +T RA+
Sbjct: 60  AKAIAQQWSGTVQWQCTSTLRPKHKRKNWFIGI-----AYFDPPQEIQDTEILFETMRAN 114

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVN T SAVR THI TG+ V+ Q +R QH NK  A  ++   L     Q++    
Sbjct: 115 GPGGQHVNKTSSAVRATHIATGISVKIQSQRIQHANKKLAKQLIAWHLTHYLSQQQASFN 174

Query: 297 NIGESSKTEIGWGR 310
           N    +   +  G 
Sbjct: 175 NQRHLAHHRVIRGN 188


>gi|325498389|gb|EGC96248.1| prfH [Escherichia fergusonii ECD227]
          Length = 204

 Score = 62.9 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 6/195 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G  +  ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALVSLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I        + + +        +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIHYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAAL 176

Query: 296 ANIGESSKTEIGWGR 310
            +       +I  G 
Sbjct: 177 KSQRRMFHHQIERGN 191


>gi|194432592|ref|ZP_03064878.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae 1012]
 gi|194419153|gb|EDX35236.1| peptidyl-tRNA hydrolase domain protein [Shigella dysenteriae 1012]
 gi|320178936|gb|EFW53898.1| peptide chain release factor-like protein [Shigella boydii ATCC
           9905]
 gi|332085764|gb|EGI90928.1| putative peptide chain release factor H [Shigella dysenteriae
           155-74]
 gi|332094999|gb|EGJ00038.1| putative peptide chain release factor H [Shigella boydii 5216-82]
          Length = 204

 Score = 62.9 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 6/199 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G  +  ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALISLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I        + + +      R +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQGQSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVL 176

Query: 296 ANIGESSKTEIGWGRQIRS 314
            +       +I  G   R+
Sbjct: 177 KSQRRMFHHQIERGNPRRT 195


>gi|17548920|ref|NP_522260.1| peptide chain release factor-like protein [Ralstonia solanacearum
           GMI1000]
 gi|17431170|emb|CAD17850.1| putative peptide chain release factor homolog protein [Ralstonia
           solanacearum GMI1000]
          Length = 207

 Score = 62.9 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 56/195 (28%), Positives = 81/195 (41%), Gaps = 6/195 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             L+  +  G  E +      L    R +     + E LE  DGE  G  +SA + ++G 
Sbjct: 2   ILLQFSSAQGPAECELAVLKGLACLQRESALAGVRVEVLEQEDGEHPGTLRSALVSLEGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
                 +  +G  +    SPY     R   F  +        +       S+ R +T RA
Sbjct: 62  AEAAVAQRWEGTIQWTCPSPYRPRHARKNWFFGVARC-----AAPAATLPSEIRFETARA 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN T+SAVR  H+ TG+ V+ Q ERSQH NK  A  +L  KL   +       
Sbjct: 117 SGPGGQHVNKTESAVRAIHLATGISVKVQTERSQHANKRLAVLLLAHKLASHDAAASAAQ 176

Query: 296 ANIGESSKTEIGWGR 310
                +   ++  G 
Sbjct: 177 RAHRRTLHHQVARGN 191


>gi|68171148|ref|ZP_00544556.1| hypothetical protein EchaDRAFT_0701 [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|67999418|gb|EAM86059.1| hypothetical protein EchaDRAFT_0701 [Ehrlichia chaffeensis str.
           Sapulpa]
          Length = 39

 Score = 62.5 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 18/35 (51%), Positives = 25/35 (71%)

Query: 317 LQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATL 351
           + PYQMVKD+RT  E  + + VLDG+LD F+ + L
Sbjct: 1   MHPYQMVKDIRTGHEVGNINSVLDGNLDSFIISAL 35


>gi|323943355|gb|EGB39508.1| RF-1 domain-containing protein [Escherichia coli E482]
          Length = 185

 Score = 62.5 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%)

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           + + G NA+   +   G  + +  SPY  +  R   F  I        + + +      R
Sbjct: 37  VSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 91

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
            +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + 
Sbjct: 92  YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 151

Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314
           +    + +       +I  G   R+
Sbjct: 152 ENSAALKSQRRMFHHQIERGNPRRT 176


>gi|300947294|ref|ZP_07161497.1| putative peptide chain release factor H [Escherichia coli MS 116-1]
 gi|300955685|ref|ZP_07168035.1| putative peptide chain release factor H [Escherichia coli MS 175-1]
 gi|301643547|ref|ZP_07243589.1| putative peptide chain release factor H [Escherichia coli MS 146-1]
 gi|260450569|gb|ACX40991.1| peptide chain release factor H [Escherichia coli DH1]
 gi|300317436|gb|EFJ67220.1| putative peptide chain release factor H [Escherichia coli MS 175-1]
 gi|300453095|gb|EFK16715.1| putative peptide chain release factor H [Escherichia coli MS 116-1]
 gi|301078047|gb|EFK92853.1| putative peptide chain release factor H [Escherichia coli MS 146-1]
          Length = 178

 Score = 62.5 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%)

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           + + G NA+   +   G  + +  SPY  +  R   F  I        + + +      R
Sbjct: 30  VSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 84

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
            +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + 
Sbjct: 85  YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 144

Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314
           +    + +       +I  G   R+
Sbjct: 145 ENSAALKSQRRMFHHQIERGNPRRT 169


>gi|302780523|ref|XP_002972036.1| hypothetical protein SELMODRAFT_412495 [Selaginella moellendorffii]
 gi|300160335|gb|EFJ26953.1| hypothetical protein SELMODRAFT_412495 [Selaginella moellendorffii]
          Length = 402

 Score = 62.5 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 4/60 (6%)

Query: 285 YELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDG 341
              EL++    A+  E  + +IG      +IR+    P   V D R  + + S   +++G
Sbjct: 187 MLYELERSRTAASRSELQQDQIGSSDRLERIRTCNF-PQDRVTDHRVGVTQHSIEQIMEG 245


>gi|153846265|ref|ZP_01993846.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ3810]
 gi|149744945|gb|EDM56287.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ3810]
          Length = 116

 Score = 62.5 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 33/103 (32%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +  V+R   +     DP +  +  + + L +E   L+      +  Q    D     E+
Sbjct: 9   LETLVERYEEVQHLLGDPDVIGDQDKFRALSKEYSQLEEVTKCFQAYQQAQDDLAAAEEM 68

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
           A E+D+        +     +          +L    D ND  
Sbjct: 69  AKEDDEEMREMAQEEIKDAKEAIERLADELQILLLPKDPNDDR 111


>gi|53714002|ref|YP_099994.1| peptide chain release factor-like protein [Bacteroides fragilis
           YCH46]
 gi|253567006|ref|ZP_04844457.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|265764352|ref|ZP_06092920.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|52216867|dbj|BAD49460.1| putative peptide chain release factor [Bacteroides fragilis YCH46]
 gi|251944130|gb|EES84639.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|263256960|gb|EEZ28306.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|301163677|emb|CBW23231.1| putative peptide chain release factor [Bacteroides fragilis 638R]
          Length = 206

 Score = 62.5 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 60/198 (30%), Positives = 88/198 (44%), Gaps = 4/198 (2%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK-SATLLI 172
               YL++ +G G  E      ++L    R A+KRK + E LE   G       S  + +
Sbjct: 1   MEKTYLQITSGRGPVECCRVVALVLEKILREAQKRKLRVEILEKETGPVNRTLLSVVVAL 60

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G          +G    +  SPY  + RR   F  +  + + +        E D R +T
Sbjct: 61  EGAGCDVLADEWEGTVLWIARSPYRIHHRRKNWFVGVQTFLLSESREAT---EDDIRYET 117

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASG GGQHVN T+SAVR  HIP+G+ V    +RSQ +NK  A   L  KL    +++ 
Sbjct: 118 LRASGPGGQHVNKTESAVRAVHIPSGISVVASDQRSQWQNKKLATERLLVKLTAWNIEQA 177

Query: 293 EEIANIGESSKTEIGWGR 310
              A    S+   +  G 
Sbjct: 178 MIQAQTNWSNHNSLQRGN 195


>gi|323963546|gb|EGB59104.1| RF-1 domain-containing protein [Escherichia coli H489]
          Length = 185

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%)

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           + + G NA+   +   G  + +  SPY  +  R   F  I        + + +      R
Sbjct: 37  VSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEKEQSDAIR 91

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
            +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + 
Sbjct: 92  YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 151

Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314
           +    + +       +I  G   R+
Sbjct: 152 ENSAALKSQRRMFHHQIERGNPRRT 176


>gi|332885245|gb|EGK05496.1| peptide chain release factor H [Dysgonomonas mossii DSM 22836]
          Length = 206

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 4/198 (2%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA-TLLI 172
           +N  YL++ +G G  E      ++L    + A + K + E LE   GE      +  + +
Sbjct: 2   NNKIYLQITSGRGPAECCRAVALVLEKILKQARELKLEAEVLEREQGEINRTLFSAIISL 61

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G      +   +GV +    SPY    +R   F  +        S   ++        T
Sbjct: 62  EGNKIDEIVNEWEGVIQWTAQSPYRIYHKRKNWFVGV---KSFTPSELSDVDMKYITYQT 118

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            R+SGAGGQHVN T++AVR  H P+G+ V    +RSQH+NK  A   L  KL     ++ 
Sbjct: 119 LRSSGAGGQHVNKTETAVRAIHNPSGLSVIASDQRSQHQNKKLATERLLVKLSAWTEEQM 178

Query: 293 EEIANIGESSKTEIGWGR 310
            + A     +   +  G 
Sbjct: 179 MQEAQKNWDNHNSLERGN 196


>gi|300929514|ref|ZP_07144981.1| putative peptide chain release factor H [Escherichia coli MS 187-1]
 gi|300462556|gb|EFK26049.1| putative peptide chain release factor H [Escherichia coli MS 187-1]
 gi|323972417|gb|EGB67624.1| RF-1 domain-containing protein [Escherichia coli TA007]
          Length = 178

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%)

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           + + G NA+   +   G  + +  SPY  +  R   F  I        + + +      R
Sbjct: 30  VSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEKEQSDAIR 84

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
            +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + 
Sbjct: 85  YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 144

Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314
           +    + +       +I  G   R+
Sbjct: 145 ENSAALKSQRRMFHHQIERGNPRRT 169


>gi|331671827|ref|ZP_08372623.1| putative peptide chain release factor H [Escherichia coli TA280]
 gi|331070816|gb|EGI42175.1| putative peptide chain release factor H [Escherichia coli TA280]
          Length = 232

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 6/200 (3%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATL 170
            +     L++ +  G  E        L    + A ++      LE   G  +  ++SA +
Sbjct: 25  REKRMILLQLSSAQGPEECCLAVKKALDRLIKEATRQDVAVTVLETETGRYSDTLRSALI 84

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            + G +A+   +   G  + +  SPY  +  R   F  I        + + +      R 
Sbjct: 85  SLDGDSAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRY 139

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +
Sbjct: 140 ETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQE 199

Query: 291 KREEIANIGESSKTEIGWGR 310
               + +       +I  G 
Sbjct: 200 NSAALKSQRRMFHHQIERGN 219


>gi|209917447|ref|YP_002291531.1| peptide chain release factor-like protein [Escherichia coli SE11]
 gi|209910706|dbj|BAG75780.1| peptide chain release factor [Escherichia coli SE11]
          Length = 202

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 6/198 (3%)

Query: 118 YLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGPN 176
            L++ +  G  E        L    + A ++      LE   G  +  ++SA + + G N
Sbjct: 1   MLQLSSAQGPEECCLAVKKALERLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGDN 60

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
           A+   +   G  + +  SPY  +  R   F  I        + + +      R +T R+S
Sbjct: 61  AWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRYETLRSS 115

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    + 
Sbjct: 116 GPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVLK 175

Query: 297 NIGESSKTEIGWGRQIRS 314
           +       +I  G   R+
Sbjct: 176 SQRRMFHHQIERGNPRRT 193


>gi|331675918|ref|ZP_08376635.1| putative peptide chain release factor H [Escherichia coli H591]
 gi|331076478|gb|EGI47755.1| putative peptide chain release factor H [Escherichia coli H591]
          Length = 232

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 6/204 (2%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATL 170
            +     L++ +  G  E        L    + A ++      LE   G  +  ++SA +
Sbjct: 25  REKRMILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALV 84

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            + G NA+   +   G  + +  SPY  +  R   F  I        + + +      R 
Sbjct: 85  SLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRY 139

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +
Sbjct: 140 ETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQE 199

Query: 291 KREEIANIGESSKTEIGWGRQIRS 314
               + +       +I  G   R+
Sbjct: 200 NSAVLKSQRRMFHHQIERGNPRRT 223


>gi|256020250|ref|ZP_05434115.1| peptide chain release factor-like protein [Shigella sp. D9]
 gi|332281412|ref|ZP_08393825.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella sp. D9]
 gi|323181570|gb|EFZ66990.1| putative peptide chain release factor H [Escherichia coli 1357]
 gi|332103764|gb|EGJ07110.1| peptidyl-tRNA hydrolase domain-containing protein [Shigella sp. D9]
          Length = 204

 Score = 62.1 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 6/199 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G  +  ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I        +   +      R +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTANEQEQSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVL 176

Query: 296 ANIGESSKTEIGWGRQIRS 314
            +       +I  G   R+
Sbjct: 177 KSQRRMFHHQIERGNPRRT 195


>gi|168238579|ref|ZP_02663637.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|194735122|ref|YP_002113341.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|194710624|gb|ACF89845.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197288612|gb|EDY27989.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
          Length = 204

 Score = 62.1 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 12/201 (5%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD-GEEAGIKSATLLIKGP 175
             L++ +  G  E        L   T+ A + K     LE         ++SA + + G 
Sbjct: 2   ILLQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A  + +   G    +  SPY  +  R   +  I        S + ++   +   +T R+
Sbjct: 62  KAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGI-----GRFSADEQMQSDEIHFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L   E Q++ E 
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWRL---EQQRQNEC 173

Query: 296 ANIGESSK---TEIGWGRQIR 313
           A +    +    +I  G  +R
Sbjct: 174 AALKSERRLFHHQIERGNPLR 194


>gi|157156041|ref|YP_001461424.1| peptide chain release factor-like protein [Escherichia coli
           E24377A]
 gi|187732116|ref|YP_001879031.1| peptide chain release factor-like protein [Shigella boydii CDC
           3083-94]
 gi|300817246|ref|ZP_07097464.1| putative peptide chain release factor H [Escherichia coli MS 107-1]
 gi|300823448|ref|ZP_07103578.1| putative peptide chain release factor H [Escherichia coli MS 119-7]
 gi|307313497|ref|ZP_07593118.1| peptide chain release factor H [Escherichia coli W]
 gi|309797856|ref|ZP_07692238.1| putative peptide chain release factor H [Escherichia coli MS 145-7]
 gi|331666568|ref|ZP_08367442.1| putative peptide chain release factor H [Escherichia coli TA271]
 gi|157078071|gb|ABV17779.1| putative peptide chain release factor H [Escherichia coli E24377A]
 gi|187429108|gb|ACD08382.1| peptidyl-tRNA hydrolase domain protein [Shigella boydii CDC
           3083-94]
 gi|300524066|gb|EFK45135.1| putative peptide chain release factor H [Escherichia coli MS 119-7]
 gi|300530222|gb|EFK51284.1| putative peptide chain release factor H [Escherichia coli MS 107-1]
 gi|306906665|gb|EFN37176.1| peptide chain release factor H [Escherichia coli W]
 gi|308118540|gb|EFO55802.1| putative peptide chain release factor H [Escherichia coli MS 145-7]
 gi|320176701|gb|EFW51738.1| peptide chain release factor-like protein [Shigella dysenteriae CDC
           74-1112]
 gi|320185048|gb|EFW59829.1| peptide chain release factor-like protein [Shigella flexneri CDC
           796-83]
 gi|323379877|gb|ADX52145.1| peptide chain release factor H [Escherichia coli KO11]
 gi|331065792|gb|EGI37676.1| putative peptide chain release factor H [Escherichia coli TA271]
          Length = 204

 Score = 62.1 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 6/199 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G  +  ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I        + + +      R +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVL 176

Query: 296 ANIGESSKTEIGWGRQIRS 314
            +       +I  G   R+
Sbjct: 177 KSQRRMFHHQIERGNPRRT 195


>gi|218703550|ref|YP_002411069.1| peptide chain release factor-like protein [Escherichia coli UMN026]
 gi|218430647|emb|CAR11515.1| putative peptide chain release factor [Escherichia coli UMN026]
          Length = 166

 Score = 62.1 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%)

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           + + G NA+   +   G  + +  SPY  +  R   F  I        + + +      R
Sbjct: 18  ISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 72

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
            +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + 
Sbjct: 73  YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 132

Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314
           +    + +       +I  G   R+
Sbjct: 133 ENSAALKSQRRMFHHQIERGNPRRT 157


>gi|293418352|ref|ZP_06660787.1| peptide chain release factor H [Escherichia coli B088]
 gi|291324880|gb|EFE64295.1| peptide chain release factor H [Escherichia coli B088]
 gi|323945388|gb|EGB41442.1| RF-1 domain-containing protein [Escherichia coli H120]
 gi|324115579|gb|EGC09518.1| RF-1 domain-containing protein [Escherichia coli E1167]
          Length = 204

 Score = 62.1 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 6/199 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G  +  ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALISLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I        + + +      R +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVL 176

Query: 296 ANIGESSKTEIGWGRQIRS 314
            +       +I  G   R+
Sbjct: 177 KSQRRMFHHQIERGNPRRT 195


>gi|260853488|ref|YP_003227379.1| putative peptide chain release factor RF-1 [Escherichia coli
           O26:H11 str. 11368]
 gi|260866434|ref|YP_003232836.1| putative peptide chain release factor RF-1 [Escherichia coli
           O111:H- str. 11128]
 gi|257752137|dbj|BAI23639.1| predicted peptide chain release factor RF-1 [Escherichia coli
           O26:H11 str. 11368]
 gi|257762790|dbj|BAI34285.1| predicted peptide chain release factor RF-1 [Escherichia coli
           O111:H- str. 11128]
 gi|323178470|gb|EFZ64048.1| putative peptide chain release factor H [Escherichia coli 1180]
          Length = 204

 Score = 62.1 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 6/199 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE-IHDGEEAGIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE         ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGHYSDTLRSALISLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I        + + +      R +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVL 176

Query: 296 ANIGESSKTEIGWGRQIRS 314
            ++      +I  G   R+
Sbjct: 177 KSLRRMFHHQIERGNPRRT 195


>gi|157159718|ref|YP_001457036.1| peptide chain release factor-like protein [Escherichia coli HS]
 gi|191165713|ref|ZP_03027552.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B7A]
 gi|300921975|ref|ZP_07138121.1| putative peptide chain release factor H [Escherichia coli MS 182-1]
 gi|301325442|ref|ZP_07218928.1| putative peptide chain release factor H [Escherichia coli MS 78-1]
 gi|157065398|gb|ABV04653.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli HS]
 gi|190904220|gb|EDV63930.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B7A]
 gi|300421645|gb|EFK04956.1| putative peptide chain release factor H [Escherichia coli MS 182-1]
 gi|300847740|gb|EFK75500.1| putative peptide chain release factor H [Escherichia coli MS 78-1]
 gi|320201148|gb|EFW75731.1| peptide chain release factor-like protein [Escherichia coli
           EC4100B]
 gi|323169568|gb|EFZ55240.1| putative peptide chain release factor H [Shigella sonnei 53G]
 gi|324019875|gb|EGB89094.1| putative peptide chain release factor H [Escherichia coli MS 117-3]
          Length = 204

 Score = 62.1 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 6/199 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G  +  ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALERLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I        + + +      R +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVL 176

Query: 296 ANIGESSKTEIGWGRQIRS 314
            +       +I  G   R+
Sbjct: 177 KSQRRMFHHQIERGNPRRT 195


>gi|193063214|ref|ZP_03044305.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E22]
 gi|194427638|ref|ZP_03060186.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B171]
 gi|260842481|ref|YP_003220259.1| putative peptide chain release factor RF-1 [Escherichia coli
           O103:H2 str. 12009]
 gi|192931122|gb|EDV83725.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli E22]
 gi|194414408|gb|EDX30682.1| peptidyl-tRNA hydrolase domain protein [Escherichia coli B171]
 gi|257757628|dbj|BAI29125.1| predicted peptide chain release factor RF-1 [Escherichia coli
           O103:H2 str. 12009]
          Length = 204

 Score = 62.1 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 6/199 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G  +  ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALISLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I        + + +      R +T R+
Sbjct: 62  NAWALSESWCGAIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAVL 176

Query: 296 ANIGESSKTEIGWGRQIRS 314
            +       +I  G   R+
Sbjct: 177 KSQRRMFHHQIERGNPRRT 195


>gi|16759310|ref|NP_454927.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. CT18]
 gi|16763697|ref|NP_459312.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|29142917|ref|NP_806259.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
 gi|62178886|ref|YP_215303.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|161615515|ref|YP_001589480.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Paratyphi B str. SPB7]
 gi|167993332|ref|ZP_02574427.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168232270|ref|ZP_02657328.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168465389|ref|ZP_02699271.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168819094|ref|ZP_02831094.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194443695|ref|YP_002039557.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194472201|ref|ZP_03078185.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|198241865|ref|YP_002214270.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|200389746|ref|ZP_03216357.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|207855800|ref|YP_002242451.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|213025683|ref|ZP_03340130.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
 gi|213161389|ref|ZP_03347099.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
 gi|213416713|ref|ZP_03349857.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E01-6750]
 gi|213425142|ref|ZP_03357892.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E02-1180]
 gi|213649630|ref|ZP_03379683.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. J185]
 gi|213852433|ref|ZP_03381965.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. M223]
 gi|224582156|ref|YP_002635954.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|289826861|ref|ZP_06545771.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-3139]
 gi|25513287|pir||AI0542 probable peptide chain release factor prfH [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16418816|gb|AAL19271.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|16501601|emb|CAD08785.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29138549|gb|AAO70119.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|62126519|gb|AAX64222.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161364879|gb|ABX68647.1| hypothetical protein SPAB_03287 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194402358|gb|ACF62580.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194458565|gb|EDX47404.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|195631774|gb|EDX50294.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197936381|gb|ACH73714.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|199602191|gb|EDZ00737.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205328589|gb|EDZ15353.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205333479|gb|EDZ20243.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205344152|gb|EDZ30916.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|206707603|emb|CAR31885.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224466683|gb|ACN44513.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261245540|emb|CBG23335.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267992008|gb|ACY86893.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 14028S]
 gi|301156930|emb|CBW16412.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312911285|dbj|BAJ35259.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|320084570|emb|CBY94362.1| Peptide chain release factor 1 RF-1 [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321224975|gb|EFX50036.1| Peptide chain release protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322713338|gb|EFZ04909.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
 gi|323128632|gb|ADX16062.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
 gi|326622014|gb|EGE28359.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Dublin str. 3246]
 gi|332987265|gb|AEF06248.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. UK-1]
          Length = 204

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 12/201 (5%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD-GEEAGIKSATLLIKGP 175
             L++ +  G  E        L   T+ A + K     LE         ++SA + + G 
Sbjct: 2   ILLQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A  + +   G    +  SPY  +  R   +  I        S +  I   + R +T R+
Sbjct: 62  KAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGI-----GRFSADEHIQSDEIRFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L   E Q++ E 
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWRL---EQQRQNEC 173

Query: 296 ANIGESSK---TEIGWGRQIR 313
           A +    +    +I  G  +R
Sbjct: 174 AALKSERRLFHHQIERGNPLR 194


>gi|167553099|ref|ZP_02346849.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205322360|gb|EDZ10199.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
          Length = 204

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 12/201 (5%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD-GEEAGIKSATLLIKGP 175
             L++ +  G  E        L   T+ A + K     LE         ++SA + + G 
Sbjct: 2   ILLQLSSAQGPDECCLAVKKTLDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A  + +   G    +  SPY  +  R   +  I        S +  I   + R +T R+
Sbjct: 62  KAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGI-----GRFSADEHIQSDEIRFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L   E Q++ E 
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWRL---EQQRQNEC 173

Query: 296 ANIGESSK---TEIGWGRQIR 313
           A +    +    +I  G  +R
Sbjct: 174 AALKSERRLFHHQIERGNPLR 194


>gi|60682199|ref|YP_212343.1| peptide chain release factor-like protein [Bacteroides fragilis
           NCTC 9343]
 gi|60493633|emb|CAH08422.1| putative peptide chain release factor [Bacteroides fragilis NCTC
           9343]
          Length = 206

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 60/198 (30%), Positives = 88/198 (44%), Gaps = 4/198 (2%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK-SATLLI 172
               YL++ +G G  E      ++L    R A+KRK + E LE   G       S  + +
Sbjct: 1   MEKTYLQITSGRGPVECCRVVALVLEKILREAQKRKLRVEILEKETGPVNRTLLSVVVAL 60

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G          +G    +  SPY  + RR   F  +  + + +        E D R +T
Sbjct: 61  EGAGCDVLADEWEGTVLWIARSPYRIHHRRKNWFVGVQTFLLSESCEAT---EDDIRYET 117

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASG GGQHVN T+SAVR  HIP+G+ V    +RSQ +NK  A   L  KL    +++ 
Sbjct: 118 LRASGPGGQHVNKTESAVRAVHIPSGISVVASDQRSQWQNKKLATERLLVKLTAWNIEQA 177

Query: 293 EEIANIGESSKTEIGWGR 310
              A    S+   +  G 
Sbjct: 178 MIQAQTNWSNHNSLQRGN 195


>gi|56414557|ref|YP_151632.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|197363487|ref|YP_002143124.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|56128814|gb|AAV78320.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197094964|emb|CAR60501.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
          Length = 204

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 12/201 (5%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD-GEEAGIKSATLLIKGP 175
             L++ +  G  E        L   T+ A + K     LE         ++SA + + G 
Sbjct: 2   ILLQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A  + +   G    +  SPY  +  R   +  I        S +  I   + R +T R+
Sbjct: 62  KAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGI-----GRFSADEHIQSDEIRFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN +DSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L   E Q++ E 
Sbjct: 117 SGPGGQHVNKSDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWRL---EQQRQNEC 173

Query: 296 ANIGESSK---TEIGWGRQIR 313
           A +    +    +I  G  +R
Sbjct: 174 AALKSERRLFHHQIERGNPLR 194


>gi|197248567|ref|YP_002145297.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|204927397|ref|ZP_03218599.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|197212270|gb|ACH49667.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|204324062|gb|EDZ09257.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
          Length = 204

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 12/201 (5%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD-GEEAGIKSATLLIKGP 175
             L++ +  G  E        L   T+ A + K     LE         ++SA + + G 
Sbjct: 2   ILLQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A  + +   G    +  SPY  +  R   +  I        S + ++   + R +T R+
Sbjct: 62  KAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGI-----GRFSADEQMQSDEIRFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L   E Q++ E 
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWRL---EQQRQNEC 173

Query: 296 ANIGESSK---TEIGWGRQIR 313
           A +    +    +I  G  +R
Sbjct: 174 AALKSERRLFHHQIERGNPLR 194


>gi|238913295|ref|ZP_04657132.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
          Length = 204

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 12/201 (5%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD-GEEAGIKSATLLIKGP 175
             L++ +  G  E        L   T+ A + K     LE         ++SA + + G 
Sbjct: 2   ILLQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A  + +   G    +  SPY  +  R   +  I        S +  I   + R +T R+
Sbjct: 62  KAMAFSERWCGTLLWICTSPYRPHHGRKNWYIGI-----GRFSADEHIQSDEIRFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L   E Q++ E 
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWRL---EQQRQNEC 173

Query: 296 ANIGESSK---TEIGWGRQIR 313
           A +    +    +I  G  +R
Sbjct: 174 AALKSERRLFHHQIERGNPLR 194


>gi|322614608|gb|EFY11537.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322620127|gb|EFY16999.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322623421|gb|EFY20260.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322629281|gb|EFY26060.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322632001|gb|EFY28755.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322637261|gb|EFY33963.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322642458|gb|EFY39060.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322646289|gb|EFY42803.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322652443|gb|EFY48797.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322653395|gb|EFY49728.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322660457|gb|EFY56693.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322664609|gb|EFY60802.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322669338|gb|EFY65488.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322670884|gb|EFY67017.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322678877|gb|EFY74932.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322681906|gb|EFY77931.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322688032|gb|EFY83998.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|323194387|gb|EFZ79582.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323197802|gb|EFZ82934.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323203402|gb|EFZ88427.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323206853|gb|EFZ91806.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323210378|gb|EFZ95270.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323214620|gb|EFZ99371.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323223176|gb|EGA07519.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323224853|gb|EGA09116.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323230057|gb|EGA14177.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323233795|gb|EGA17884.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323238511|gb|EGA22569.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323244199|gb|EGA28208.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323246359|gb|EGA30342.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323251985|gb|EGA35848.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323257982|gb|EGA41661.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|323259921|gb|EGA43552.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323265065|gb|EGA48564.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323272628|gb|EGA56035.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
          Length = 204

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 12/201 (5%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD-GEEAGIKSATLLIKGP 175
             L++ +  G  E        L    + A + K     LE         ++SA + + G 
Sbjct: 2   ILLQLSSAQGPDECCLAVKKALDCLAKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A  + +   G    +  SPY  +  R   +  I        S + ++   + R +T R+
Sbjct: 62  KAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGI-----GRFSADEQMQSDEIRFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L   E Q++ E 
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWRL---EQQRQNEC 173

Query: 296 ANIGESSK---TEIGWGRQIR 313
           A +    +    +I  G  +R
Sbjct: 174 AALKSERRLFHHQIERGNPLR 194


>gi|213610056|ref|ZP_03369882.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-2068]
          Length = 204

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 58/198 (29%), Positives = 89/198 (44%), Gaps = 12/198 (6%)

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD-GEEAGIKSATLLIKGPNAY 178
           ++ +  G  E        L   T+ A + K     LE         ++SA + + G  A 
Sbjct: 5   QLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGEKAM 64

Query: 179 GWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGA 238
            + +   G    +  SPY  +  R   +  I        S +  I   + R +T R+SG 
Sbjct: 65  AFSERWCGTLLWICTSPYRPHHGRKNWYVGI-----GRFSADEHIQSDEIRFETLRSSGP 119

Query: 239 GGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI 298
           GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L   E Q++ E A +
Sbjct: 120 GGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWRL---EQQRQNECAAL 176

Query: 299 GESSK---TEIGWGRQIR 313
               +    +I  G  +R
Sbjct: 177 KSERRLFHHQIERGNPLR 194


>gi|218297204|ref|ZP_03497866.1| PCRF domain protein [Thermus aquaticus Y51MC23]
 gi|218242481|gb|EED09020.1| PCRF domain protein [Thermus aquaticus Y51MC23]
          Length = 148

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 52/144 (36%), Positives = 77/144 (53%), Gaps = 4/144 (2%)

Query: 46  MRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFE 105
            +E   L   +   + ++  L   + L E    E+  +        L     ++E    E
Sbjct: 2   SQEAARLRRTVETFRSLEGDLEGLMELWEELPAEEREA----LKPELLEAAKKLEVLYHE 57

Query: 106 SLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI 165
           +LL+      +A L +  GAGGTE+ DWA MLLRMYTR+AE++ F+ E +++  G EAG+
Sbjct: 58  TLLNFPHAEKNAILTIQPGAGGTEACDWAEMLLRMYTRFAERQGFEVEVVDLRPGAEAGV 117

Query: 166 KSATLLIKGPNAYGWLKGEQGVHR 189
             A +L+KG NAYG L  E GVHR
Sbjct: 118 DYAQILVKGENAYGLLSAEAGVHR 141


>gi|89107109|ref|AP_000889.1| predicted peptide chain release factor [Escherichia coli str. K-12
           substr. W3110]
 gi|256024120|ref|ZP_05437985.1| peptide chain release factor-like protein [Escherichia sp. 4_1_40B]
 gi|307136901|ref|ZP_07496257.1| peptide chain release factor-like protein [Escherichia coli H736]
 gi|331640765|ref|ZP_08341900.1| putative peptide chain release factor H [Escherichia coli H736]
 gi|115311624|sp|P28369|RFH_ECOLI RecName: Full=Putative peptide chain release factor homolog;
           Short=RF-H
 gi|1552804|gb|AAB08656.1| PrfH [Escherichia coli]
 gi|85674391|dbj|BAA77905.2| predicted peptide chain release factor [Escherichia coli str. K12
           substr. W3110]
 gi|315134921|dbj|BAJ42080.1| peptide chain release factor 2 [Escherichia coli DH1]
 gi|315616801|gb|EFU97418.1| putative peptide chain release factor H [Escherichia coli 3431]
 gi|331037563|gb|EGI09783.1| putative peptide chain release factor H [Escherichia coli H736]
          Length = 166

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%)

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           + + G NA+   +   G  + +  SPY  +  R   F  I        + + +      R
Sbjct: 18  VSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 72

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
            +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + 
Sbjct: 73  YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 132

Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314
           +    + +       +I  G   R+
Sbjct: 133 ENSAALKSQRRMFHHQIERGNPRRT 157


>gi|215485384|ref|YP_002327815.1| peptide chain release factor-like protein [Escherichia coli O127:H6
           str. E2348/69]
 gi|215263456|emb|CAS07777.1| predicted peptide chain release factor [Escherichia coli O127:H6
           str. E2348/69]
          Length = 193

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 6/195 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175
             L++ +  G  E        L    + A ++      LE   G  +  ++SA + + G 
Sbjct: 2   ILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETETGRYSDTLRSALVSLDGD 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           NA+   +   G  + +  SPY  +  R   F  I        + + +      R +T R+
Sbjct: 62  NAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIRYETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +    +
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAAL 176

Query: 296 ANIGESSKTEIGWGR 310
            +       +I  G 
Sbjct: 177 KSQRRMFHHQIERGN 191


>gi|194438235|ref|ZP_03070327.1| putative peptide chain release factor H [Escherichia coli 101-1]
 gi|253774739|ref|YP_003037570.1| peptide chain release factor-like protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254160350|ref|YP_003043458.1| peptide chain release factor-like protein [Escherichia coli B str.
           REL606]
 gi|297520538|ref|ZP_06938924.1| peptide chain release factor-like protein [Escherichia coli OP50]
 gi|312970362|ref|ZP_07784543.1| putative peptide chain release factor H [Escherichia coli 1827-70]
 gi|194422899|gb|EDX38894.1| putative peptide chain release factor H [Escherichia coli 101-1]
 gi|242376066|emb|CAQ30751.1| prfH [Escherichia coli BL21(DE3)]
 gi|253325783|gb|ACT30385.1| peptide chain release factor H [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253972251|gb|ACT37922.1| peptide chain release factor 2 [Escherichia coli B str. REL606]
 gi|253976460|gb|ACT42130.1| peptide chain release factor 2 [Escherichia coli BL21(DE3)]
 gi|310337011|gb|EFQ02149.1| putative peptide chain release factor H [Escherichia coli 1827-70]
 gi|332341589|gb|AEE54923.1| peptide chain release factor-like protein PrfH [Escherichia coli
           UMNK88]
          Length = 166

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%)

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           + + G NA+   +   G  + +  SPY  +  R   F  I        + + +      R
Sbjct: 18  VSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEKEQSDAIR 72

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
            +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + 
Sbjct: 73  YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 132

Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314
           +    + +       +I  G   R+
Sbjct: 133 ENSAALKSQRRMFHHQIERGNPRRT 157


>gi|331651168|ref|ZP_08352193.1| putative peptide chain release factor H [Escherichia coli M718]
 gi|331050909|gb|EGI22961.1| putative peptide chain release factor H [Escherichia coli M718]
          Length = 166

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%)

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           + + G NA+   +   G  + +  SPY  +  R   F  I        + + +      R
Sbjct: 18  ISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 72

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
            +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + 
Sbjct: 73  YETQRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 132

Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314
           +    + +       +I  G   R+
Sbjct: 133 ENSAALKSQRRMFHHQIERGNPRRT 157


>gi|161486311|ref|NP_752319.2| peptide chain release factor-like protein [Escherichia coli CFT073]
 gi|162138491|ref|YP_539310.2| peptide chain release factor-like protein [Escherichia coli UTI89]
 gi|218557192|ref|YP_002390105.1| peptide chain release factor-like protein [Escherichia coli S88]
 gi|218688128|ref|YP_002396340.1| peptide chain release factor-like protein [Escherichia coli ED1a]
 gi|218363961|emb|CAR01626.1| putative peptide chain release factor [Escherichia coli S88]
 gi|218425692|emb|CAR06484.1| putative peptide chain release factor [Escherichia coli ED1a]
          Length = 166

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%)

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           + + G NA+   +   G  + +  SPY  +  R   F  I        + + +      R
Sbjct: 18  ISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 72

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
            +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + 
Sbjct: 73  YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 132

Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314
           +    + +       +I  G   R+
Sbjct: 133 ENSAALKSQRRMFHHQIERGNPRRT 157


>gi|78066331|ref|YP_369100.1| peptide chain release factor-like protein [Burkholderia sp. 383]
 gi|77967076|gb|ABB08456.1| Class I peptide chain release factor [Burkholderia sp. 383]
          Length = 204

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 55/203 (27%), Positives = 85/203 (41%), Gaps = 8/203 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGI-KSATLLIKGP 175
             +++ +  G  E Q  A   LR     A+ ++     L+   GE  G  +SA L + G 
Sbjct: 1   MLMQISSAHGPLECQLAAANALRRLQAEADAQRVVVTVLDAEPGERPGTLRSALLDLDGA 60

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A        G  + +  SPY     R   F  +        +    + + D R +  RA
Sbjct: 61  GAQALADRWTGTLQWICASPYRLRHPRKNWFIGVTRC-----ADAQPLPDGDVRFEAMRA 115

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
            G GGQHVN T SA+R TH+ TG+ V+ + ERSQH NK  A  +L+ +L +   +   + 
Sbjct: 116 RGPGGQHVNKTSSAIRATHVATGLSVRVESERSQHANKRLALQLLQVRLQQEADRHASDA 175

Query: 296 ANIGESSKTEIGWGRQIRSYVLQ 318
                     +  G  +R  V  
Sbjct: 176 RRQRRMQHFALERGNPVR--VFH 196


>gi|162138281|ref|YP_668200.2| peptide chain release factor-like protein [Escherichia coli 536]
          Length = 166

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%)

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           + + G NA+   +   G  + +  SPY  +  R   F  I        + + +      R
Sbjct: 18  ISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 72

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
            +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + 
Sbjct: 73  YETLRSSGPGGQHVNKTDSAVRATHLSSGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 132

Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314
           +    + +       +I  G   R+
Sbjct: 133 ENSAALKSQRRMFHHQIERGNPRRT 157


>gi|15799941|ref|NP_285953.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           EDL933]
 gi|15829517|ref|NP_308290.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. Sakai]
 gi|82775830|ref|YP_402177.1| peptide chain release factor-like protein [Shigella dysenteriae
           Sd197]
 gi|168750219|ref|ZP_02775241.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4113]
 gi|168757264|ref|ZP_02782271.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4401]
 gi|168763477|ref|ZP_02788484.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4501]
 gi|168770034|ref|ZP_02795041.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4486]
 gi|168776124|ref|ZP_02801131.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4196]
 gi|168782997|ref|ZP_02808004.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4076]
 gi|168789709|ref|ZP_02814716.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC869]
 gi|168800326|ref|ZP_02825333.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC508]
 gi|195938639|ref|ZP_03084021.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. EC4024]
 gi|208806453|ref|ZP_03248790.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4206]
 gi|208812358|ref|ZP_03253687.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4045]
 gi|208821267|ref|ZP_03261587.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4042]
 gi|209398288|ref|YP_002268863.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4115]
 gi|217325768|ref|ZP_03441852.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. TW14588]
 gi|254791396|ref|YP_003076233.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. TW14359]
 gi|261223709|ref|ZP_05937990.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. FRIK2000]
 gi|261255882|ref|ZP_05948415.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. FRIK966]
 gi|291281080|ref|YP_003497898.1| putative peptide chain release factor [Escherichia coli O55:H7 str.
           CB9615]
 gi|309786024|ref|ZP_07680653.1| putative peptide chain release factor H [Shigella dysenteriae 1617]
 gi|12513007|gb|AAG54561.1|AE005201_14 probable peptide chain release factor [Escherichia coli O157:H7
           str. EDL933]
 gi|13359720|dbj|BAB33686.1| probable peptide chain release factor [Escherichia coli O157:H7
           str. Sakai]
 gi|81239978|gb|ABB60688.1| probable peptide chain release factor [Shigella dysenteriae Sd197]
 gi|187768441|gb|EDU32285.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4196]
 gi|188015585|gb|EDU53707.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4113]
 gi|188999642|gb|EDU68628.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4076]
 gi|189355734|gb|EDU74153.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4401]
 gi|189361064|gb|EDU79483.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4486]
 gi|189366361|gb|EDU84777.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4501]
 gi|189370775|gb|EDU89191.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC869]
 gi|189377360|gb|EDU95776.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC508]
 gi|208726254|gb|EDZ75855.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4206]
 gi|208733635|gb|EDZ82322.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4045]
 gi|208741390|gb|EDZ89072.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4042]
 gi|209159688|gb|ACI37121.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. EC4115]
 gi|209745314|gb|ACI70964.1| probable peptide chain release factor [Escherichia coli]
 gi|209745316|gb|ACI70965.1| probable peptide chain release factor [Escherichia coli]
 gi|209745318|gb|ACI70966.1| probable peptide chain release factor [Escherichia coli]
 gi|209745320|gb|ACI70967.1| probable peptide chain release factor [Escherichia coli]
 gi|209745322|gb|ACI70968.1| probable peptide chain release factor [Escherichia coli]
 gi|217321989|gb|EEC30413.1| putative peptide chain release factor H [Escherichia coli O157:H7
           str. TW14588]
 gi|254590796|gb|ACT70157.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. TW14359]
 gi|290760953|gb|ADD54914.1| Probable peptide chain release factor [Escherichia coli O55:H7 str.
           CB9615]
 gi|308926135|gb|EFP71613.1| putative peptide chain release factor H [Shigella dysenteriae 1617]
 gi|320190210|gb|EFW64860.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. EC1212]
 gi|320638171|gb|EFX07920.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. G5101]
 gi|320643253|gb|EFX12452.1| peptide chain release factor-like protein [Escherichia coli O157:H-
           str. 493-89]
 gi|320648900|gb|EFX17518.1| peptide chain release factor-like protein [Escherichia coli O157:H-
           str. H 2687]
 gi|320660248|gb|EFX27758.1| peptide chain release factor-like protein [Escherichia coli O55:H7
           str. USDA 5905]
 gi|320665014|gb|EFX32124.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. LSU-61]
 gi|326338757|gb|EGD62576.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. 1044]
 gi|326342456|gb|EGD66236.1| peptide chain release factor-like protein [Escherichia coli O157:H7
           str. 1125]
          Length = 166

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%)

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           + + G NA+   +   G  + + +SPY  +  R   F  I        + + +      R
Sbjct: 18  ISLDGDNAWALSESWCGTIQWICLSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 72

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
            +T R SG GGQHVN TDSAVR TH+ TG+ V+ Q ERSQH NK  A  ++  KL + + 
Sbjct: 73  YETLRPSGPGGQHVNKTDSAVRATHLATGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 132

Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314
           +    + +       +I  G   R+
Sbjct: 133 ENSAVLKSQRRMFHHQIERGNPRRT 157


>gi|115634718|ref|XP_787728.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115976393|ref|XP_001185397.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 90

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 6/83 (7%)

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVL 317
            + QQERSQHKN++ A  ML+  +Y   L   ++ ++      +++G G    +IR+Y  
Sbjct: 11  AESQQERSQHKNRSIAMTMLQPHIYNRILA--DQTSSERSMRSSQVGTGGRSEKIRTYNY 68

Query: 318 QPYQMVKDLRTNIEKTSPSDVLD 340
           Q    + D R  +        +D
Sbjct: 69  Q-QDRITDHRRGLTVHGVPSAID 90


>gi|145594573|ref|YP_001158870.1| class I peptide chain release factor [Salinispora tropica CNB-440]
 gi|145303910|gb|ABP54492.1| Class I peptide chain release factor [Salinispora tropica CNB-440]
          Length = 202

 Score = 61.4 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/195 (24%), Positives = 73/195 (37%), Gaps = 3/195 (1%)

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKGPNAYG 179
           + AG G  E       LL      A +       L+   G+  G  +S  + + G     
Sbjct: 7   LSAGRGPQECAWALARLLSRLEADAVRNDVDVVRLDSVVGDRPGTYRSVLVRLTGTGVEA 66

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           +     G       SPY +   R   + +        D      +E+D  +   R  G G
Sbjct: 67  FAARWTGTLCWQAPSPYRTGHGRKNWYVAAR--QCEVDVPVTPFTEADVEVLAVRTGGPG 124

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQH N   +AVR TH PTG VV    ER    N++ A  +LR ++   +   R  +  I 
Sbjct: 125 GQHRNKASTAVRATHRPTGTVVVVDTERQLSLNRSIALRLLRQRITAGDEAARRALVAIR 184

Query: 300 ESSKTEIGWGRQIRS 314
             +  E+  G   R+
Sbjct: 185 RRAHDEVVRGGPTRT 199


>gi|320654680|gb|EFX22681.1| peptide chain release factor-like protein [Escherichia coli O55:H7
           str. 3256-97 TW 07815]
          Length = 166

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 5/145 (3%)

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           + + G NA+   +   G  + + +SPY  +  R   F  I        + + +      R
Sbjct: 18  ISLDGDNAWALSESWCGTIQWICLSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 72

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
            +T R SG GGQHVN TD AVR TH+ TG+ V+ Q ERSQH NK  A  ++  KL + + 
Sbjct: 73  YETLRPSGPGGQHVNKTDLAVRATHLATGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 132

Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314
           +    + +       +I  G   R+
Sbjct: 133 ENSAVLKSQRRMFHHQIERGNPRRT 157


>gi|224538378|ref|ZP_03678917.1| hypothetical protein BACCELL_03269 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520007|gb|EEF89112.1| hypothetical protein BACCELL_03269 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 205

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 4/198 (2%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK-SATLLI 172
               Y+++ +G G  E      ++L    + A  +  KTE +E   G       SA + +
Sbjct: 1   MEKVYMQITSGRGPAECCRVVALVLEKILKQAVAKGVKTEIVERETGPLNRTLLSAVISL 60

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G + +  ++  +G  + +  SPY    +R   F  +  +     S   E +E++ R +T
Sbjct: 61  QGGDYHALIEDWEGSVQWIAQSPYRIYHKRKNWFVGVQTF---TLSESQEATEAEIRYET 117

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASG GGQHVN T+SAVR  HIPTG+ V    +RSQ +NK  A   L  KL    +++ 
Sbjct: 118 LRASGPGGQHVNKTESAVRAVHIPTGMSVVASDQRSQWQNKKLATERLLLKLASWSIEQA 177

Query: 293 EEIANIGESSKTEIGWGR 310
              A    S+   +  G 
Sbjct: 178 MIQAQANWSNHNCLQRGN 195


>gi|255009670|ref|ZP_05281796.1| peptide chain release factor-like protein [Bacteroides fragilis
           3_1_12]
 gi|313147455|ref|ZP_07809648.1| class I peptide chain release factor [Bacteroides fragilis 3_1_12]
 gi|313136222|gb|EFR53582.1| class I peptide chain release factor [Bacteroides fragilis 3_1_12]
          Length = 207

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 4/198 (2%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK-SATLLI 172
               YL++ +G G  E      ++L    + A+ RK K E +E   G       SA + +
Sbjct: 2   MEKTYLQITSGRGPVECCRVVALVLERILKQAQTRKLKVEIVEKEAGPANRTLLSAVIAL 61

Query: 173 KGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDT 232
           +G      ++  +G    +  SPY  + RR   F  +  + + +        E++ R +T
Sbjct: 62  EGAGCDTLVEEWEGTVLWIARSPYRIHHRRKNWFVGVQTFLLSESREAT---ENEIRYET 118

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            RASG GGQHVN T+SAVR  HIP+G+ V    +RSQ +NK  A   L  KL    +++ 
Sbjct: 119 LRASGPGGQHVNKTESAVRAVHIPSGISVVASDQRSQWQNKKLATERLLVKLTAWNVEQA 178

Query: 293 EEIANIGESSKTEIGWGR 310
              A    S+   +  G 
Sbjct: 179 MIQAQANWSNHNSLQRGN 196


>gi|218698820|ref|YP_002406449.1| peptide chain release factor-like protein [Escherichia coli IAI39]
 gi|218368806|emb|CAR16554.1| putative peptide chain release factor [Escherichia coli IAI39]
          Length = 166

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%)

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           + + G NA+   +   G  + +  SPY  +  R   F  I        + + +      R
Sbjct: 18  ISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 72

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
            +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + 
Sbjct: 73  YETLRSSGPGGQHVNNTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 132

Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314
           +    + +       +I  G   R+
Sbjct: 133 ENSAALKSQRRMFHHQIERGNPRRT 157


>gi|332829815|gb|EGK02457.1| peptide chain release factor H [Dysgonomonas gadei ATCC BAA-286]
          Length = 207

 Score = 61.0 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 53/200 (26%), Positives = 86/200 (43%), Gaps = 4/200 (2%)

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSA-TL 170
             +   YL++ +G G  E      + +      A+K     E +E   GE      +  +
Sbjct: 1   MRNCKIYLQITSGRGPAECGRVVALTVEKILTQAKKIGLDVEVVEREPGEINRTLFSAVI 60

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I+G  A   ++  +G  + +  SPY    +R   F  +          +  + E +   
Sbjct: 61  SIEGLKADEIVREWEGTIQWIAQSPYRIYHKRKNWFVGV---RSFTIPDKHNVDEREISY 117

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
            T RASG GGQHVN T+SAVR THI +G+ V    +RSQ +NK  A   L  KL    ++
Sbjct: 118 QTLRASGPGGQHVNKTESAVRATHISSGLSVTASDQRSQLQNKKLAVERLLIKLAAWNME 177

Query: 291 KREEIANIGESSKTEIGWGR 310
           +  + A    ++   +  G 
Sbjct: 178 QNMQKAQENWNNHNTLQRGN 197


>gi|168240054|ref|ZP_02664986.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|194449085|ref|YP_002044299.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|197263075|ref|ZP_03163149.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|194407389|gb|ACF67608.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|197241330|gb|EDY23950.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|205339954|gb|EDZ26718.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
          Length = 204

 Score = 60.6 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 12/201 (5%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD-GEEAGIKSATLLIKGP 175
             L++ +  G  E        L   T+ A + K     LE         ++SA + + G 
Sbjct: 2   ILLQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A  + +   G    +  SPY  +  R   +  I        S +  I   + R +T R+
Sbjct: 62  KAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGI-----GRFSADEHIQSDEIRFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L   E Q++ E 
Sbjct: 117 SGPGGQHVNKTDSAVRATHLVSGISVKVQSERSQHANKRLARLLIAWRL---EQQRQNEC 173

Query: 296 ANIGESSK---TEIGWGRQIR 313
           A +    +    +I  G  +R
Sbjct: 174 AALKSERRLFHHQIERGNPLR 194


>gi|29346864|ref|NP_810367.1| peptide chain release factor-like protein [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|29338761|gb|AAO76561.1| putative peptide chain release factor [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 206

 Score = 60.6 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 60/196 (30%), Positives = 88/196 (44%), Gaps = 4/196 (2%)

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK-SATLLIKG 174
             YL++ +G G  E      ++L    R A+    K E +E   G       SAT+ ++G
Sbjct: 4   KVYLQITSGRGPAECCRVVALVLERIVRQAQASGLKMEMIEREVGPVNRTLLSATIALQG 63

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             +       +G  + +  SPY    +R   F  +        S   E +E D R +T R
Sbjct: 64  AASGELADEWEGTVQWIAQSPYRIYHKRKNWFVGVH---SFVLSESQEATERDFRYETLR 120

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASG GGQHVN T+SAVR  HIP+G+ V    +RSQ +NK  A   L  KL    +++   
Sbjct: 121 ASGPGGQHVNKTESAVRAVHIPSGMSVVASDQRSQWQNKKLATERLLVKLSSWTMEQAMI 180

Query: 295 IANIGESSKTEIGWGR 310
            A    S+   +  G 
Sbjct: 181 QAQENWSNHNHLQRGN 196


>gi|332213671|ref|XP_003255948.1| PREDICTED: peptide chain release factor 1-like, mitochondrial
           isoform 4 [Nomascus leucogenys]
          Length = 235

 Score = 60.6 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 68/208 (32%), Positives = 88/208 (42%), Gaps = 37/208 (17%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            L   I  + E +  L +   LL    E+       E +   + I           + S 
Sbjct: 63  ELLAVIKLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D ND  LEV AG GG                                    G++ A+ 
Sbjct: 123 ETDENDLILEVTAGVGG------------------------------------GLRHASA 146

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P     I + I+  D RI
Sbjct: 147 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQ-PTEINLVINPKDLRI 205

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTG 258
           DT RASGAGGQHVNTTDSAVRI H+PT 
Sbjct: 206 DTKRASGAGGQHVNTTDSAVRIVHLPTD 233


>gi|290475750|ref|YP_003468639.1| putative peptide chain release factor [Xenorhabdus bovienii
           SS-2004]
 gi|289175072|emb|CBJ81875.1| putative peptide chain release factor (modular protein)
           [Xenorhabdus bovienii SS-2004]
          Length = 205

 Score = 60.6 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 6/199 (3%)

Query: 117 AYLEVHAGAGGTESQDWA-NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
             L++ A  G  E        L R+     E         +        ++S  + I+G 
Sbjct: 2   ILLQISAAQGPDECALAVRKALERLIDEADELGIMVNILEKESGRRSRTLRSVMVAIQGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
           N   + +   G  + +  SP+     R   F  +            +I ES+ R +T RA
Sbjct: 62  NEQQFFERWDGTIKWICASPWRKGDGRKNWFIGV-----AQFKPLQQIMESEIRFETLRA 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN T+SA+R  HI +G+ V+ Q ERSQH N+  A  +L  +L + +   + ++
Sbjct: 117 SGPGGQHVNKTESAIRAVHIASGISVKVQSERSQHANRRLACLLLEHRLQQQQDMHQAQL 176

Query: 296 ANIGESSKTEIGWGRQIRS 314
                    +I  G  +R+
Sbjct: 177 KAERRLFHNQIERGNPVRT 195


>gi|212697039|ref|ZP_03305167.1| hypothetical protein ANHYDRO_01604 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675814|gb|EEB35421.1| hypothetical protein ANHYDRO_01604 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 115

 Score = 60.2 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 41/100 (41%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G   D DN  + +  +  +T   + W +  +A+ +M +     +       
Sbjct: 13  ELDKNLKMIGAHLDPDNLFKEIKNIEKETLKENFWDDSQKAQEIMADLSDKKDDYKTFIN 72

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101
           +++ L D   L+++  E ++        +N   +  +  +
Sbjct: 73  LKEELEDQSDLIDIIEETNEELDSLVDVENSLNMLKKKYH 112


>gi|253572326|ref|ZP_04849729.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251838101|gb|EES66189.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 206

 Score = 60.2 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 60/196 (30%), Positives = 88/196 (44%), Gaps = 4/196 (2%)

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK-SATLLIKG 174
             YL++ +G G  E      ++L    R A+    K E +E   G       SAT+ ++G
Sbjct: 4   KVYLQITSGRGPAECCRVVALVLERIVRQAQASGLKVEMIEREVGPVNRTLLSATIALQG 63

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             +       +G  + +  SPY    +R   F  +        S   E +E D R +T R
Sbjct: 64  AASGELADEWEGTVQWIAQSPYRIYHKRKNWFVGVH---SFVLSESQEATERDFRYETLR 120

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASG GGQHVN T+SAVR  HIP+G+ V    +RSQ +NK  A   L  KL    +++   
Sbjct: 121 ASGPGGQHVNKTESAVRAVHIPSGMSVVASDQRSQWQNKKLATERLLVKLSSWTMEQAMI 180

Query: 295 IANIGESSKTEIGWGR 310
            A    S+   +  G 
Sbjct: 181 QAQENWSNHNHLQRGN 196


>gi|298386489|ref|ZP_06996045.1| peptide chain release factor H [Bacteroides sp. 1_1_14]
 gi|298260866|gb|EFI03734.1| peptide chain release factor H [Bacteroides sp. 1_1_14]
          Length = 206

 Score = 60.2 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 60/196 (30%), Positives = 88/196 (44%), Gaps = 4/196 (2%)

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK-SATLLIKG 174
             YL++ +G G  E      ++L    R A+    K E +E   G       SAT+ ++G
Sbjct: 4   KVYLQITSGRGPAECCRVVALVLERIVRQAQASGLKVEMIEREVGPVNRTLLSATIALQG 63

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
             +       +G  + +  SPY    +R   F  +        S   E +E D R +T R
Sbjct: 64  TASGELADEWEGTVQWIAQSPYRIYHKRKNWFVGVH---SFVLSESQEATERDFRYETLR 120

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
           ASG GGQHVN T+SAVR  HIP+G+ V    +RSQ +NK  A   L  KL    +++   
Sbjct: 121 ASGPGGQHVNKTESAVRAVHIPSGMSVVASDQRSQWQNKKLATERLLVKLSSWTMEQAMI 180

Query: 295 IANIGESSKTEIGWGR 310
            A    S+   +  G 
Sbjct: 181 QAQENWSNHNHLQRGN 196


>gi|218550059|ref|YP_002383850.1| peptide chain release factor-like protein [Escherichia fergusonii
           ATCC 35469]
 gi|218357600|emb|CAQ90239.1| putative peptide chain release factor [Escherichia fergusonii ATCC
           35469]
          Length = 166

 Score = 60.2 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 5/141 (3%)

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           + + G NA+   +   G  + +  SPY  +  R   F  I        + + +      R
Sbjct: 18  VSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 72

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
            +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + 
Sbjct: 73  YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 132

Query: 290 QKREEIANIGESSKTEIGWGR 310
           +    + +       +I  G 
Sbjct: 133 ENSAALKSQRRMFHHQIERGN 153


>gi|326789649|ref|YP_004307470.1| peptide chain release factor H [Clostridium lentocellum DSM 5427]
 gi|326540413|gb|ADZ82272.1| peptide chain release factor H [Clostridium lentocellum DSM 5427]
          Length = 195

 Score = 60.2 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 4/150 (2%)

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G                   +QG    +  SPY +N +R   +  + +     + ++   
Sbjct: 40  GKAKGCFTYITCELDEAADLKQGSVLWICESPYRANCKRKNWYIDVSIL----EEVKKVS 95

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK 283
           +E   R +T+R+ G GGQHVN  ++ VR  H+PTG+ V   + RSQH NK  A N L   
Sbjct: 96  TEEIIRFETFRSGGKGGQHVNKVETGVRAIHMPTGIAVVSTEARSQHMNKQIAMNRLLDL 155

Query: 284 LYELELQKREEIANIGESSKTEIGWGRQIR 313
           L ++     ++   +    +  +  G  IR
Sbjct: 156 LAQVNEDANQKEKQLAWLEQNRLIRGNPIR 185


>gi|77415494|gb|AAI05974.1| MTRF1L protein [Homo sapiens]
          Length = 235

 Score = 60.2 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 68/208 (32%), Positives = 88/208 (42%), Gaps = 37/208 (17%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            L   I  + E +  L +   LL    E+       E +   + I           + S 
Sbjct: 63  ELLAVIKLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D ND  LEV AG GG                                    G++ A+ 
Sbjct: 123 ETDENDLILEVTAGVGG------------------------------------GLRHASA 146

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P     I + I+  D RI
Sbjct: 147 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQ-PTEINLVINPKDLRI 205

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTG 258
           DT RASGAGGQHVNTTDSAVRI H+PT 
Sbjct: 206 DTKRASGAGGQHVNTTDSAVRIVHLPTD 233


>gi|302866524|ref|YP_003835161.1| peptide chain release factor H [Micromonospora aurantiaca ATCC
           27029]
 gi|315502934|ref|YP_004081821.1| peptide chain release factor h [Micromonospora sp. L5]
 gi|302569383|gb|ADL45585.1| peptide chain release factor H [Micromonospora aurantiaca ATCC
           27029]
 gi|315409553|gb|ADU07670.1| peptide chain release factor H [Micromonospora sp. L5]
          Length = 201

 Score = 60.2 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 53/194 (27%), Positives = 76/194 (39%), Gaps = 3/194 (1%)

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG-IKSATLLIKGPNAYG 179
           + AG G  E       LL      A +R  +TE +E   G+ AG  +S  + I G  A  
Sbjct: 6   LSAGRGPAECAWALARLLSRLEGEAARRGLRTERVETVPGDRAGTYRSVLVRITGAGAEA 65

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           +  G  G       SPY +   R   + +        D +     E+D      R  G G
Sbjct: 66  FAAGWTGTLCWQAPSPYRTGHGRKNWYVTART--CRTDVVVTPFHEADVEFVPCRTGGPG 123

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIG 299
           GQH N   +AVR TH P+G  V    ER  H N+  A  +LR ++   +   R    +  
Sbjct: 124 GQHRNKASTAVRATHRPSGRTVVVDTERHLHLNRRIAVELLRQRIAADDEAARRAGVDAR 183

Query: 300 ESSKTEIGWGRQIR 313
                E+  G  +R
Sbjct: 184 WRVHDELVRGDPVR 197


>gi|149369402|ref|ZP_01889254.1| putative peptide chain release factor [unidentified eubacterium
           SCB49]
 gi|149356829|gb|EDM45384.1| putative peptide chain release factor [unidentified eubacterium
           SCB49]
          Length = 238

 Score = 60.2 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 4/208 (1%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG-EEAGI 165
           +L      N   +++ AG G  E        L+   +         E +   +G E   I
Sbjct: 1   MLEWTNKMNTQIIQITAGRGPAECCWVVAQTLKFLIKELTATNITYEIISKENGFENRTI 60

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
           +S TL +KG     +L    G  + V  S +  + +R   F + +    V+++ ++E+  
Sbjct: 61  QSVTLQLKGKQLDTFLANWLGTIQWVGTSTFRKHHKRKNWFIACF---KVEETNKLELVL 117

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
           ++      R+SG GGQHVN   SA+R TH  +G+ V     RSQH+N+  A   L+ K+ 
Sbjct: 118 NEVSFQAMRSSGPGGQHVNKVSSAIRATHKKSGLQVVAMDSRSQHQNRKIAIKRLQEKVS 177

Query: 286 ELELQKREEIANIGESSKTEIGWGRQIR 313
                  +   +    +  EI  G  +R
Sbjct: 178 NFNRNTLQNSVDDQWRNHLEIKRGNPVR 205


>gi|90019981|ref|YP_525808.1| putative peptide chain release factor [Saccharophagus degradans
           2-40]
 gi|89949581|gb|ABD79596.1| Class I peptide chain release factor [Saccharophagus degradans
           2-40]
          Length = 248

 Score = 59.8 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 48/174 (27%), Positives = 74/174 (42%), Gaps = 3/174 (1%)

Query: 144 WAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH 203
             E   F       H        S  L I+G  A  +     G H+    S Y    +R 
Sbjct: 65  VVESLAFDKMLRNQHIVMPDAYLSVLLRIEGEQAQLFANEWCGTHKWQGESIYRPKHKRI 124

Query: 204 TSFSSIWVY---PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
             F  +        V+ SI  +  +     ++ ++SGAGGQHVNTT+SAVR TH P+G+ 
Sbjct: 125 NWFVGVERITPVKPVETSINYQQLQRQLVFESMKSSGAGGQHVNTTNSAVRATHTPSGIT 184

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           V+   +RSQH+NK  A   +   L   E +   +  N       ++  G  +++
Sbjct: 185 VRVDTDRSQHRNKRLALERIAMLLLSAEKEGANKQVNERWLQHYQVKRGSPVKT 238


>gi|74310877|ref|YP_309296.1| peptide chain release factor-like protein [Shigella sonnei Ss046]
 gi|82542839|ref|YP_406786.1| peptide chain release factor-like protein [Shigella boydii Sb227]
 gi|188494291|ref|ZP_03001561.1| putative peptide chain release factor H [Escherichia coli 53638]
 gi|73854354|gb|AAZ87061.1| probable peptide chain release factor [Shigella sonnei Ss046]
 gi|81244250|gb|ABB64958.1| probable peptide chain release factor [Shigella boydii Sb227]
 gi|188489490|gb|EDU64593.1| putative peptide chain release factor H [Escherichia coli 53638]
 gi|323171088|gb|EFZ56737.1| putative peptide chain release factor H [Escherichia coli LT-68]
 gi|332098554|gb|EGJ03520.1| putative peptide chain release factor H [Shigella boydii 3594-74]
          Length = 166

 Score = 59.8 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%)

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           + + G NA+   +   G  + +  SPY  +  R   F  I        + + +      R
Sbjct: 18  VSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 72

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
            +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + 
Sbjct: 73  YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 132

Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314
           +    + +       +I  G   R+
Sbjct: 133 ENSAVLKSQRRMFHHQIERGNPRRT 157


>gi|218552840|ref|YP_002385753.1| peptide chain release factor-like protein [Escherichia coli IAI1]
 gi|218359608|emb|CAQ97149.1| putative peptide chain release factor [Escherichia coli IAI1]
          Length = 166

 Score = 59.8 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%)

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           + + G NA+   +   G  + +  SPY  +  R   F  I        + + +      R
Sbjct: 18  ISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 72

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
            +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + 
Sbjct: 73  YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 132

Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314
           +    + +       +I  G   R+
Sbjct: 133 ENSAVLKSQRRMFHHQIERGNPRRT 157


>gi|195611870|gb|ACG27765.1| peptide chain release factor 2 [Zea mays]
          Length = 262

 Score = 59.8 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 42/187 (22%), Positives = 84/187 (44%), Gaps = 3/187 (1%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            + + A QR+       +  +LW N  ++   +         +  +K+++ +  +  ++ 
Sbjct: 69  LELEEA-QRIKQ-EEVLQKRNLWDNPAKSHETLSALADAIRVVDHLKDLRFKAEEAKLIS 126

Query: 74  ELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +L+  +     L + +          ++  Q   LL G  D   A + V A + G  S+ 
Sbjct: 127 QLSEMDAINGELFKQAYKSSVDASEYLDRYQMYKLLKGPYDKEGACIIVTAVSNGVTSEL 186

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA  +  MYT WA K+ +K   +E        I+SAT+ I+    +G L GE+G+H+++ 
Sbjct: 187 WAEKVFGMYTSWARKQGYKVGLIEKIFSTSGHIQSATMEIESEYMFGTLSGEKGMHQMIY 246

Query: 193 ISPYDSN 199
            S  +S+
Sbjct: 247 SSIENSD 253


>gi|218693719|ref|YP_002401386.1| peptide chain release factor-like protein [Escherichia coli 55989]
 gi|218350451|emb|CAU96139.1| putative peptide chain release factor [Escherichia coli 55989]
          Length = 166

 Score = 59.4 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%)

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           + + G NA+   +   G  + +  SPY  +  R   F  I        + + +      R
Sbjct: 18  ISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 72

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
            +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + 
Sbjct: 73  YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 132

Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314
           +    + +       +I  G   R+
Sbjct: 133 ENSAVLKSQRRMFHHQIERGNPRRT 157


>gi|323160301|gb|EFZ46254.1| putative peptide chain release factor H [Escherichia coli E128010]
          Length = 166

 Score = 59.4 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 5/145 (3%)

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           + + G NA+   +   G  + +  SPY  +  R   F  I        + + +      R
Sbjct: 18  ISLDGDNAWALSESWCGAIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 72

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
            +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + 
Sbjct: 73  YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 132

Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314
           +    + +       +I  G   R+
Sbjct: 133 ENSAVLKSQRRMFHHQIERGNPRRT 157


>gi|56203460|emb|CAI18899.1| mitochondrial translational release factor 1-like [Homo sapiens]
          Length = 235

 Score = 59.4 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 68/208 (32%), Positives = 88/208 (42%), Gaps = 37/208 (17%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            L   I  + E +  L +   LL    E+       E +   + I           + S 
Sbjct: 63  ELLAVIKLLNEKERELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D ND  LEV AG GG                                    G++ A+ 
Sbjct: 123 ETDENDLILEVTAGVGG------------------------------------GLRHASA 146

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P     I + I+  D RI
Sbjct: 147 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQ-PTEINLVINPKDLRI 205

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTG 258
           DT RASGAGGQHVNTTDSAVRI H+PT 
Sbjct: 206 DTKRASGAGGQHVNTTDSAVRIVHLPTD 233


>gi|323158080|gb|EFZ44179.1| putative peptide chain release factor H [Escherichia coli EPECa14]
          Length = 166

 Score = 59.4 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 5/145 (3%)

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           + + G NA+   +   G  + +  SPY  +  R   F  I        + + +      R
Sbjct: 18  ISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 72

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
            +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + 
Sbjct: 73  YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQ 132

Query: 290 QKREEIANIGESSKTEIGWGRQIRS 314
           +    + ++      +I  G   R+
Sbjct: 133 ENSAVLKSLRRMFHHQIERGNPRRT 157


>gi|114609873|ref|XP_001140447.1| PREDICTED: mitochondrial translational release factor 1-like
           isoform 1 [Pan troglodytes]
          Length = 235

 Score = 59.0 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 68/208 (32%), Positives = 88/208 (42%), Gaps = 37/208 (17%)

Query: 51  HLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            L   I  + E +  L +   LL    E+       E +   + I           + S 
Sbjct: 63  ELLAVIRLLNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSE 122

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATL 170
           E D ND  LEV AG GG                                    G++ A+ 
Sbjct: 123 ETDENDLILEVTAGVGG------------------------------------GLRHASA 146

Query: 171 LIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
            I G  AY  +K E GVHR+ R+   +   R HTS  ++ + P     I + I+  D RI
Sbjct: 147 SIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQ-PTEINLVINPKDLRI 205

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTG 258
           DT RASGAGGQHVNTTDSAVRI H+PT 
Sbjct: 206 DTKRASGAGGQHVNTTDSAVRIVHLPTD 233


>gi|319935093|ref|ZP_08009534.1| hypothetical protein HMPREF9488_00365 [Coprobacillus sp. 29_1]
 gi|319809988|gb|EFW06365.1| hypothetical protein HMPREF9488_00365 [Coprobacillus sp. 29_1]
          Length = 195

 Score = 59.0 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/208 (22%), Positives = 87/208 (41%), Gaps = 13/208 (6%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             +++++G G  E +    ML +   +     +  +  +              L     +
Sbjct: 1   MLIQINSGQGPKECEYACYMLYQELLKEYSSLEVVSRYVS---------DQKCLKSITFS 51

Query: 177 AYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
            +  L   +G  + +  SP+  + +R   F  I +               D + +T+R+S
Sbjct: 52  IHEDLSYLEGTVQWICQSPFRPHHKRRNWFVDISIIKEELKIEN----VEDIKFETFRSS 107

Query: 237 GAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           G GGQ+VN   +A+R  HIPTG+ V    +RSQ +NK  A+  L  K+ ++     + I 
Sbjct: 108 GKGGQNVNKVSTAIRAIHIPTGISVVAMDQRSQLQNKKIAYLRLMEKINQVNSSHHKRID 167

Query: 297 NIGESSKTEIGWGRQIRSYVLQPYQMVK 324
            +  +   +I  G  IR Y    ++ +K
Sbjct: 168 YLNWNKHNQIVRGNPIRVYSGMKFKRIK 195


>gi|168261270|ref|ZP_02683243.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|205349709|gb|EDZ36340.1| putative peptide chain release factor H [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
          Length = 204

 Score = 59.0 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 12/201 (5%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD-GEEAGIKSATLLIKGP 175
             L++ +  G  E        L   T+ A + K     LE         ++SA + + G 
Sbjct: 2   ILLQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A  + +   G    +  SPY  +  R   +  I        S +  I   + R +T R+
Sbjct: 62  KAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGI-----GRFSADEHIQSDEIRFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L   E Q++ E 
Sbjct: 117 SGPGGQHVNKTDSAVRATHLVSGISVKVQSERSQHANKRLARLLIAWRL---EQQRQNEC 173

Query: 296 ANIGESSK---TEIGWGRQIR 313
           A +    +    +I  G  +R
Sbjct: 174 AVLKSERRLFHHQIERGNPLR 194


>gi|219362723|ref|NP_001136772.1| hypothetical protein LOC100216914 [Zea mays]
 gi|194697000|gb|ACF82584.1| unknown [Zea mays]
          Length = 262

 Score = 59.0 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/187 (22%), Positives = 84/187 (44%), Gaps = 3/187 (1%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
            + + A QR+       +  +LW N  ++   +         +  +K+++ +  +  ++ 
Sbjct: 69  LELEEA-QRIKQ-EEVLQKRNLWDNPAKSHETLSALADAIRVVDHLKDLRFKAEEAKLIS 126

Query: 74  ELALEEDDCSILQETSDNLQRIK-LEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           +L+  +     L + +          ++  Q   LL G  D   A + V A + G  S+ 
Sbjct: 127 QLSEMDAINGELFKQAYKSSVDASEYLDRYQMYKLLKGPYDKEGACIIVTAVSNGVTSEL 186

Query: 133 WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVR 192
           WA  +  MYT WA K+ +K   +E        I+SAT+ I+    +G L GE+G+H+++ 
Sbjct: 187 WAEKVFGMYTSWARKQGYKVGLIEKIFSTSGHIQSATMEIESEYMFGTLSGEKGMHQMIY 246

Query: 193 ISPYDSN 199
            S  +S+
Sbjct: 247 SSLENSD 253


>gi|323249067|gb|EGA32987.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
          Length = 56

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 310 RQIRSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMK 348
            + R+Y   P   V D R N+      + ++G LD  ++
Sbjct: 1   DRNRTYNF-PQGRVTDHRINLTLYRLDETMEGKLDMLIE 38


>gi|205351639|ref|YP_002225440.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|205271420|emb|CAR36228.1| putative peptide chain release factor [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|326626670|gb|EGE33013.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9]
          Length = 204

 Score = 58.7 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 58/201 (28%), Positives = 89/201 (44%), Gaps = 12/201 (5%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD-GEEAGIKSATLLIKGP 175
             L++ +  G  E        L   T+ A + K     LE         ++SA + + G 
Sbjct: 2   ILLQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A  + +   G    +  SPY  +  R   +  I        S +  I   + R +T R+
Sbjct: 62  KAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGI-----GRFSADEHIQSDEIRFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  +L   E Q++   
Sbjct: 117 SGPGGQHVNKTDSAVRATHLVSGISVKVQSERSQHANKRLARLLIAWRL---EQQRQNGC 173

Query: 296 ANIGESSK---TEIGWGRQIR 313
           A +    +    +I  G  +R
Sbjct: 174 AALKSERRLFHHQIERGNPLR 194


>gi|271961827|ref|YP_003336023.1| peptide chain release factor-like protein [Streptosporangium roseum
           DSM 43021]
 gi|270505002|gb|ACZ83280.1| peptide chain release factor-like protein [Streptosporangium roseum
           DSM 43021]
          Length = 219

 Score = 58.3 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/167 (27%), Positives = 69/167 (41%), Gaps = 3/167 (1%)

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGPNAYG 179
           + AG G  E       LLR     A ++  +T   +   G+     +S  + I G  A  
Sbjct: 7   LSAGRGPQECAWALARLLRRLEADATRQNLETHRAQTVPGDRPDTYRSVLIQISGAGAEA 66

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAG 239
           +     G       SPY + + R   +      P   D+     +E+D  I   R  G G
Sbjct: 67  FAASWTGTLCWQAPSPYRAGTGRKNWYVIAQ--PCQVDTPRTTFAEADVDIVACRTGGPG 124

Query: 240 GQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           GQH N   +AVR TH P+G+VV    ER    N+  A  +LR ++ +
Sbjct: 125 GQHRNKASTAVRATHRPSGIVVVVDTERQFSLNRRIAMRLLRQRIED 171


>gi|195161900|ref|XP_002021796.1| GL26306 [Drosophila persimilis]
 gi|194103596|gb|EDW25639.1| GL26306 [Drosophila persimilis]
          Length = 313

 Score = 57.9 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 45/154 (29%), Gaps = 10/154 (6%)

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           L+      +  +    F+             +     +   +T      G +H N   + 
Sbjct: 131 LIFGVNAGAGGQEAMLFAQELFEMYTSYFEHMGWEYEEFARETTDIG--GLRHANVMVNG 188

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANI-GESSKTEIGW 308
               H              + + +  A   L+A+L + +L+  E       ++ +  +  
Sbjct: 189 ADAFH-WLRFEAGVH----RVQTRELALKRLQARLVQQQLESSEASKQATKKAQQGSLNR 243

Query: 309 GRQIRSYVLQPYQMVKDLRT-NIEKTSPSDVLDG 341
             +IR+Y       V D R       +    L G
Sbjct: 244 NEKIRTYNFV-QDRVTDHRIQGGTLHNLDGFLKG 276



 Score = 45.6 bits (106), Expect = 0.011,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 64/150 (42%), Gaps = 4/150 (2%)

Query: 48  ERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQR----IKLEVEYKQ 103
               L+  ++ +++ +    +     ++  E+D+        +N        K E    Q
Sbjct: 58  RLSQLEGVVNALEQRRVLERNITSAKDIEQEKDEDMRKLMEEENEVYADLLSKQEQTMLQ 117

Query: 104 FESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA 163
               L+ +         V+AGAGG E+  +A  L  MYT + E   ++ E       +  
Sbjct: 118 ELLALADDEVYPALIFGVNAGAGGQEAMLFAQELFEMYTSYFEHMGWEYEEFARETTDIG 177

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
           G++ A +++ G +A+ WL+ E GVHR+   
Sbjct: 178 GLRHANVMVNGADAFHWLRFEAGVHRVQTR 207


>gi|319937084|ref|ZP_08011493.1| hypothetical protein HMPREF9488_02327 [Coprobacillus sp. 29_1]
 gi|319807862|gb|EFW04447.1| hypothetical protein HMPREF9488_02327 [Coprobacillus sp. 29_1]
          Length = 197

 Score = 56.7 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/147 (27%), Positives = 63/147 (42%), Gaps = 4/147 (2%)

Query: 169 TLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC 228
            L          L   +G  + +  SPY  + +R   F  + +              +D 
Sbjct: 46  CLKSAIFYTEKDLSFLEGTVQWICQSPYRPHHKRKNWFIDVSIIKEDIKIDN----TNDI 101

Query: 229 RIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           R + +R+SG GGQ+VN   +A+R  HIPTG+V     +RSQ +NK  A+  L  K+ E  
Sbjct: 102 RYEVFRSSGKGGQNVNKVSTAIRAIHIPTGIVTVSMDQRSQLQNKKIAYLRLLEKIDETS 161

Query: 289 LQKREEIANIGESSKTEIGWGRQIRSY 315
               + I  +      +I  G  IR Y
Sbjct: 162 SSINKSIHYLNWVKHNQIERGNPIRVY 188


>gi|84999208|ref|XP_954325.1| peptide chain release factor 1, mitochondrial precursor [Theileria
           annulata]
 gi|65305323|emb|CAI73648.1| peptide chain release factor 1, mitochondrial precursor, putative
           [Theileria annulata]
          Length = 194

 Score = 56.7 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 64/155 (41%), Gaps = 11/155 (7%)

Query: 129 ESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVH 188
                     ++  R+        + + + +    G     +             E GVH
Sbjct: 21  RGAHLGIRTRQILFRYHMLNYIINKCVRLIESTVQGRIVKLMNKSTEGLEDRFLREGGVH 80

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDS-----------IEIEISESDCRIDTYRASG 237
           ++ R+   + + R H+S +++ V P                 E+E++ SD    T RASG
Sbjct: 81  QVKRVPITEKSGRMHSSTATVAVLPSDMVKGNDMNNFDKLVEEVELNPSDIEWKTCRASG 140

Query: 238 AGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
            GGQ+VN  +++V + H PTG+ ++C +ER +   
Sbjct: 141 PGGQNVNKVETSVSLYHKPTGIKIECSEERYRVTE 175


>gi|213419088|ref|ZP_03352154.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 118

 Score = 56.7 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 37/110 (33%), Gaps = 1/110 (0%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +   +R   +     D  +  +    + L RE   L +      + Q    D      +
Sbjct: 9   LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 68

Query: 76  ALEEDDCSILQETSDN-LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
             + +   + QE      ++ +   +  Q   L     D  +A+LEV AG
Sbjct: 69  LDDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAG 118


>gi|212697119|ref|ZP_03305247.1| hypothetical protein ANHYDRO_01685 [Anaerococcus hydrogenalis DSM
          7454]
 gi|212675894|gb|EEB35501.1| hypothetical protein ANHYDRO_01685 [Anaerococcus hydrogenalis DSM
          7454]
          Length = 87

 Score = 56.7 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 29/83 (34%)

Query: 15 DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
          + ++  +    L  K  DP +  +  + K + RE   L   +    EI+          E
Sbjct: 4  NLEHMRENFKELEKKLADPEVLSDTDKFKKVSREYNQLKPIVEKYNEIRAAEDMIEENTE 63

Query: 75 LALEEDDCSILQETSDNLQRIKL 97
          L  E +D  ++      +   K 
Sbjct: 64 LLKEAEDKEMIDLLKAEIDENKK 86


>gi|315305718|ref|ZP_07875316.1| peptide chain release factor 1 [Listeria ivanovii FSL F6-596]
 gi|313625914|gb|EFR95448.1| peptide chain release factor 1 [Listeria ivanovii FSL F6-596]
          Length = 81

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 26/77 (33%)

Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                R   LN    DP +  +    + L +E+  +   +   +E ++         EL
Sbjct: 5  LQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITATVETYREYKNVNAQIEETKEL 64

Query: 76 ALEEDDCSILQETSDNL 92
            E+ D  + +   +  
Sbjct: 65 LSEKLDDDMREMAKEEF 81


>gi|167590758|ref|ZP_02383146.1| peptide chain release factor-like protein [Burkholderia ubonensis
           Bu]
          Length = 177

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 50/182 (27%), Positives = 75/182 (41%), Gaps = 6/182 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPN 176
             L++ +  G  E Q  A   L+     A+  +     L++  GE  G   + LL     
Sbjct: 1   MLLQISSAHGPAECQLAAAKALQRLQAEADACRVALTVLDLQPGERPGTVRSVLLDLDGA 60

Query: 177 AYGWLK-GEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
               L     G  + +  SPY     R   F  +        +    + +   + +  RA
Sbjct: 61  DAAALADRWAGTLQWICASPYRLRHPRKNWFVGVTRC-----ADAPPLPDGAVKFEAMRA 115

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
            G GGQHVN T SA+R TH+ TG  V+ + ERSQH NK  A  +L A+L E   ++    
Sbjct: 116 RGPGGQHVNKTSSAIRATHLATGTSVRVESERSQHANKRLALQLLHARLREQADREAGHA 175

Query: 296 AN 297
             
Sbjct: 176 RE 177


>gi|307265646|ref|ZP_07547199.1| peptide chain release factor 1 [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919290|gb|EFN49511.1| peptide chain release factor 1 [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 90

 Score = 56.4 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 32/85 (37%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L+ K  DP++  NV E +  ++E   +++ +   +E +  L D     EL
Sbjct: 5   LQAIEDRYVELSQKISDPNIISNVNEWRKYVKEHAAIEDIVLKYREYKKVLEDIEATKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE 100
               D+        +  Q  + +  
Sbjct: 65  LSSNDEELKEMAEEELSQLEEKKKN 89


>gi|323172436|gb|EFZ58073.1| peptide chain release factor 1 domain protein [Escherichia coli
          LT-68]
          Length = 145

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 21/76 (27%)

Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9  LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76 ALEEDDCSILQETSDN 91
            + +   + Q+    
Sbjct: 69 LDDPEMREMAQDELRE 84


>gi|116053620|ref|YP_793947.1| peptide chain release factor-like protein [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|115588841|gb|ABJ14856.1| putative peptide chain release factor [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 204

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 54/194 (27%), Positives = 82/194 (42%), Gaps = 6/194 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
             L++ A  G  E               A +   + E LE   GE     +S  L ++G 
Sbjct: 2   ILLQLSAAQGPAECCLAVAKAFERLCLEAAQAGVEVEVLEEVAGERPRTWRSLLLGLRGI 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A    +   G  + +  SPY +   R   F     +     +      E + R +T R+
Sbjct: 62  AAEALAEHWCGGIQWICTSPYRARHARKNWFIGAERF-----AAPPASLEGEIRFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVNTTDSAVR TH+ +G+ V+ Q +RSQH NK  A  ++  +L +      + +
Sbjct: 117 SGPGGQHVNTTDSAVRATHLASGISVRVQSQRSQHANKRLAILLIARRLADQASSAADAL 176

Query: 296 ANIGESSKTEIGWG 309
                 +   I  G
Sbjct: 177 RAERRQAHGRISRG 190


>gi|296392334|ref|ZP_06881809.1| peptide chain release factor-like protein [Pseudomonas aeruginosa
           PAb1]
          Length = 204

 Score = 56.4 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 53/194 (27%), Positives = 83/194 (42%), Gaps = 6/194 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEA-GIKSATLLIKGP 175
             L++ A  G  E               A +   + E +E   GE +   +S  L ++G 
Sbjct: 2   ILLQLSAAQGPAECCLAVAKAFERLCLEAAQAGVEVEVIEEVAGERSRTWRSLLLGLRGT 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A    +   G  + +  SPY +   R   F     +     +      E + R +T R+
Sbjct: 62  AAEALAERWCGGIQWICPSPYRARHARKNWFIGAERF-----AAPPASLEGEIRFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVNTTDSAVR TH+ +G+ V+ Q +RSQH NK  A  ++  +L +      + +
Sbjct: 117 SGPGGQHVNTTDSAVRATHLASGISVRVQSQRSQHANKRLAILLIARRLADQASSAADAL 176

Query: 296 ANIGESSKTEIGWG 309
                 +   I  G
Sbjct: 177 RAERRQAHGRISRG 190


>gi|281356039|ref|ZP_06242532.1| peptide chain release factor H [Victivallis vadensis ATCC BAA-548]
 gi|281317408|gb|EFB01429.1| peptide chain release factor H [Victivallis vadensis ATCC BAA-548]
          Length = 204

 Score = 56.0 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 86/200 (43%), Gaps = 3/200 (1%)

Query: 114 SNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIK 173
               +LE+ +G G  E +     L+   T    +     E     + E++ +KS    ++
Sbjct: 1   MKRLFLEISSGQGPEECELLVAKLMVRLTSELRREVRFREVALNGNREKSLVKSVLFELE 60

Query: 174 GPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTY 233
           G  A   +    G  + +  SP+  + +R   ++ I ++   +   E+    +D      
Sbjct: 61  GEGAAVSVAPWLGTIQWIAASPFRPHHKRRNWYAGIRLF---EAEPELAFDPNDVEFSAS 117

Query: 234 RASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKRE 293
           R+SG GGQHVNT+++ ++  H PTG      +ERSQ +N+  A   L AK+         
Sbjct: 118 RSSGPGGQHVNTSNTRIQAFHRPTGQCAVAGEERSQLRNRELALARLAAKVATRGSAGSA 177

Query: 294 EIANIGESSKTEIGWGRQIR 313
            +      +  E+  G+ +R
Sbjct: 178 RLGLEAWRAHRELERGKPVR 197


>gi|213026980|ref|ZP_03341427.1| peptide chain release factor 1 [Salmonella enterica subsp.
          enterica serovar Typhi str. 404ty]
          Length = 102

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 10/76 (13%), Positives = 22/76 (28%)

Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           +   +R   +     D  +  +    + L RE   L +      + Q    D      +
Sbjct: 14 LEALHERHEEVQALLGDAGIIADQDRFRALSREYAQLSDVSRCFTDWQQVQDDIETAQMM 73

Query: 76 ALEEDDCSILQETSDN 91
            + +   + QE    
Sbjct: 74 LDDPEMREMAQEELRE 89


>gi|218894572|ref|YP_002443442.1| peptide chain release factor-like protein [Pseudomonas aeruginosa
           LESB58]
 gi|218774801|emb|CAW30619.1| probable peptide chain release factor [Pseudomonas aeruginosa
           LESB58]
          Length = 204

 Score = 56.0 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 52/194 (26%), Positives = 81/194 (41%), Gaps = 6/194 (3%)

Query: 117 AYLEVHAGAGGTESQD-WANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGP 175
             L++ A  G  E     A    R+    A+         E+        +S  L ++G 
Sbjct: 2   ILLQLSAAQGPAECCLAVAKAFERLCLEAAQAGVEVEVLEEVTGERPRTWRSLLLGLRGI 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A    +   G  + +  SPY +   R   F     +     +      E + R +T R+
Sbjct: 62  AAEALAEHWCGGIQWICTSPYRARHARKNWFIGAERF-----AAPPASLEGEIRFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVNTTDSAVR TH+ +G+ V+ Q +RSQH NK  A  ++  +L +      + +
Sbjct: 117 SGPGGQHVNTTDSAVRATHLASGISVRVQSQRSQHANKRLAILLIARRLADQASSAADAL 176

Query: 296 ANIGESSKTEIGWG 309
                 +   I  G
Sbjct: 177 RAERRQAHGRISRG 190


>gi|313111591|ref|ZP_07797390.1| putative peptide chain release factor [Pseudomonas aeruginosa
           39016]
 gi|310883892|gb|EFQ42486.1| putative peptide chain release factor [Pseudomonas aeruginosa
           39016]
          Length = 204

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 53/194 (27%), Positives = 81/194 (41%), Gaps = 6/194 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
             L++ A  G  E               A +   + E +E   GE     +S  L ++G 
Sbjct: 2   ILLQLSAAQGPAECCLAVAKAFERLCLEAAQAGVEVEVIEEVAGERPRTWRSLLLGLRGT 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A    +   G  + +  SPY +   R   F           +      E + R +T R+
Sbjct: 62  AAEALAERWCGGIQWICPSPYRARHARKNWFIGAE-----RLAAPPASLEGEIRFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVNTTDSAVR TH+ +G+ V+ Q +RSQH NK  A  ++  +L +      + +
Sbjct: 117 SGPGGQHVNTTDSAVRATHLASGISVRVQSQRSQHANKRLAILLIARRLADQASSAADAL 176

Query: 296 ANIGESSKTEIGWG 309
                 +   I  G
Sbjct: 177 RAERRRAHGRISRG 190


>gi|256751359|ref|ZP_05492238.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|256749741|gb|EEU62766.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus
           CCSD1]
          Length = 90

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 32/85 (37%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                 R   L+ K  DP++  NV E +  ++E   +++ +   +E +  L D     EL
Sbjct: 5   LQAIEDRYVDLSQKISDPNIISNVAEWRKYVKEHAAIEDIVLKYREYKKVLEDIEATKEL 64

Query: 76  ALEEDDCSILQETSDNLQRIKLEVE 100
               D+        +  Q  + +  
Sbjct: 65  LSSNDEELKEMAEEELSQLEEKKKN 89


>gi|107104573|ref|ZP_01368491.1| hypothetical protein PaerPA_01005652 [Pseudomonas aeruginosa PACS2]
          Length = 207

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 6/194 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
             L++ A  G  E               A +   + E +E   GE     +S  L ++G 
Sbjct: 5   ILLQLSAAQGPAECCLAVAKAFERLCLEAAQAGVEVEVIEEVAGERPRTWRSLLLGLRGT 64

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A    +   G  + +  SPY +   R   F     +     +      E + R +T R+
Sbjct: 65  AAEALAERWCGGIQWICPSPYRARHARKNWFIGAERF-----AAPPASLEGEIRFETLRS 119

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVNTTDSAVR TH+ +G+ V+ Q +RSQH NK  A  ++  +L +      + +
Sbjct: 120 SGPGGQHVNTTDSAVRATHLASGISVRVQSQRSQHANKRLAILLIARRLADQASSAADAL 179

Query: 296 ANIGESSKTEIGWG 309
                 +   I  G
Sbjct: 180 RAERRRAHGRISRG 193


>gi|15600663|ref|NP_254157.1| peptide chain release factor-like protein [Pseudomonas aeruginosa
           PAO1]
 gi|254237846|ref|ZP_04931169.1| hypothetical protein PACG_03946 [Pseudomonas aeruginosa C3719]
 gi|254243022|ref|ZP_04936344.1| hypothetical protein PA2G_03810 [Pseudomonas aeruginosa 2192]
 gi|9951802|gb|AAG08855.1|AE004959_11 probable peptide chain release factor [Pseudomonas aeruginosa PAO1]
 gi|126169777|gb|EAZ55288.1| hypothetical protein PACG_03946 [Pseudomonas aeruginosa C3719]
 gi|126196400|gb|EAZ60463.1| hypothetical protein PA2G_03810 [Pseudomonas aeruginosa 2192]
          Length = 204

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 6/194 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE-EAGIKSATLLIKGP 175
             L++ A  G  E               A +   + E +E   GE     +S  L ++G 
Sbjct: 2   ILLQLSAAQGPAECCLAVAKAFERLCLEAAQAGVEVEVIEEVAGERPRTWRSLLLGLRGT 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A    +   G  + +  SPY +   R   F     +     +      E + R +T R+
Sbjct: 62  AAEALAERWCGGIQWICPSPYRARHARKNWFIGAERF-----AAPPASLEGEIRFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEI 295
           SG GGQHVNTTDSAVR TH+ +G+ V+ Q +RSQH NK  A  ++  +L +      + +
Sbjct: 117 SGPGGQHVNTTDSAVRATHLASGISVRVQSQRSQHANKRLAILLIARRLADQASSAADAL 176

Query: 296 ANIGESSKTEIGWG 309
                 +   I  G
Sbjct: 177 RAERRRAHGRISRG 190


>gi|170728229|ref|YP_001762255.1| peptide chain release factor H [Shewanella woodyi ATCC 51908]
 gi|169813576|gb|ACA88160.1| peptide chain release factor H [Shewanella woodyi ATCC 51908]
          Length = 218

 Score = 55.6 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/207 (25%), Positives = 85/207 (41%), Gaps = 9/207 (4%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT------- 169
             L++ AG G         + L+   +   ++    + +E  + +E     +        
Sbjct: 2   ILLQLSAGQGPAACCKAIGLALKEIEKQCREKGVAFDLIEAIETKERFCFKSVLLQLESK 61

Query: 170 --LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESD 227
             +L +   A    K  QG    +  SP+     R  +    W +            + +
Sbjct: 62  QSVLGEDDLAKQLAKSWQGAMLWICQSPFQLEKNRVKNKRKNWFFSGQMYEFNETELDKE 121

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
               T RASGAGGQHVNTTDSAVR  H+ TG+ V+ + ERSQH NK  A  +L  KL   
Sbjct: 122 VSFQTCRASGAGGQHVNTTDSAVRAIHVATGISVRVESERSQHANKRLARALLFQKLEST 181

Query: 288 ELQKREEIANIGESSKTEIGWGRQIRS 314
           ++++             E+  G  +++
Sbjct: 182 KVEQMSLQEKARWQQHWEVERGNPVKT 208


>gi|557260|emb|CAA57573.1| protein release factor 1 [Pseudomonas aeruginosa PAO1]
          Length = 96

 Score = 55.2 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 19/66 (28%)

Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D    R   L     D  +  +    +   RE   ++  I   ++ +    D      L
Sbjct: 9  LDVLSDRYEELTALLGDAEVISDQDPFRAYSREYAEVEPVILRFRDYRKVQADLEGAQAL 68

Query: 76 ALEEDD 81
            + D 
Sbjct: 69 LKDSDP 74


>gi|207093409|ref|ZP_03241196.1| peptide chain release factor 2 [Helicobacter pylori HPKX_438_AG0C1]
          Length = 111

 Score = 54.8 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 49/99 (49%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13  LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63  QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101
           +D L +++ L ELA  ++D   L    +    ++  V+ 
Sbjct: 73  KDSLDESVELFELAQNDNDEITLSLLYEEAPILEHSVQK 111


>gi|297569022|ref|YP_003690366.1| ABC transporter related protein [Desulfurivibrio alkaliphilus AHT2]
 gi|296924937|gb|ADH85747.1| ABC transporter related protein [Desulfurivibrio alkaliphilus AHT2]
          Length = 668

 Score = 53.7 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 21/60 (35%), Gaps = 1/60 (1%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKEIQDRLCDNLILL 73
           + +   QR   L     DP ++    E   L +E   L+  +     + +    +   +L
Sbjct: 606 EVEKQEQRKDELEKLLADPEIYHRQEEFAELSKEYAELERRLERLYDQWEKVNSEIEEIL 665


>gi|703443|gb|AAB02290.1| release factor 1 [Streptococcus gordonii]
          Length = 67

 Score = 53.7 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 20/60 (33%)

Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
                R   L     DP +  +      L +E     + ++  +E +  L + +   E+
Sbjct: 7  LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASTRDTVTAYREYKQVLQNIVDAEEM 66


>gi|169841079|ref|ZP_02874192.1| hypothetical protein cdivTM_28268 [candidate division TM7
          single-cell isolate TM7a]
          Length = 65

 Score = 53.3 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 26/66 (39%), Gaps = 1/66 (1%)

Query: 7  LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
          +   GG+FD +N    ++ L  +T +   W N   ++ +++        +    ++    
Sbjct: 1  MKKSGGIFDIENLKNEINELEKRTFEADFW-NTDNSQEILKNISAKKKLLEEYDKLNGLF 59

Query: 67 CDNLIL 72
           D   +
Sbjct: 60 EDVSTI 65


>gi|293413513|ref|ZP_06656162.1| hypothetical protein ECDG_00053 [Escherichia coli B185]
 gi|291433571|gb|EFF06544.1| hypothetical protein ECDG_00053 [Escherichia coli B185]
          Length = 122

 Score = 52.9 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 35/84 (41%), Positives = 49/84 (58%)

Query: 231 DTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQ 290
           DT R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + + +
Sbjct: 30  DTLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQE 89

Query: 291 KREEIANIGESSKTEIGWGRQIRS 314
               + +       +I  G   R+
Sbjct: 90  NSAALKSQRRMFHHQIERGNPRRT 113


>gi|261884219|ref|ZP_06008258.1| peptide chain release factor 2 [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 115

 Score = 52.5 bits (124), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 44/113 (38%), Positives = 67/113 (59%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           + N +   K ++  + D   L ELA  EDD   +    ++ Q ++ ++   +   +LSGE
Sbjct: 2   ISNMLCKFKNVKSAISDAYELYELANAEDDEQTINSLFEDAQNLENKITNLEISMMLSGE 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAG 164
            DS +A + +H GAGGTES DWA+ML RMY R+ E+  FK E L+  +G+EAG
Sbjct: 62  DDSKNAIVSIHPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGDEAG 114


>gi|290984795|ref|XP_002675112.1| predicted protein [Naegleria gruberi]
 gi|284088706|gb|EFC42368.1| predicted protein [Naegleria gruberi]
          Length = 156

 Score = 52.1 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 60/150 (40%), Positives = 91/150 (60%), Gaps = 2/150 (1%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L++ ++FI      + +N  LL+L+  E+D  +++    +L  +   +E K+ ES LSG 
Sbjct: 2   LEDQLNFIDNTIADINNNEELLKLSEMENDKEMIEYIQKSLSDLINVLEKKEIESFLSGP 61

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE--EAGIKSAT 169
            DS D YLE+H GAGG ++ DW+ MLL MY       +  +  + + D    E GI+SA 
Sbjct: 62  HDSKDCYLEIHTGAGGEDASDWSQMLLNMYINCLRGSELSSFEVTLEDTSFKETGIRSAL 121

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSN 199
           L I G  AYG+LK EQGVHRLVR+SP++++
Sbjct: 122 LFISGRYAYGYLKHEQGVHRLVRLSPFNAD 151


>gi|328463691|gb|EGF35277.1| peptide chain release factor 1 [Lactobacillus rhamnosus MTCC
          5462]
          Length = 76

 Score = 52.1 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 20/55 (36%)

Query: 17 DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
          D  + R   L     DP +  +      L +E   + + ++  K+ +  L D   
Sbjct: 2  DGLLVRYEGLEELMSDPEVISDTKRYLALSKEEGGMRDVVAAYKKYKQVLSDIKE 56


>gi|213420646|ref|ZP_03353712.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 112

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 57/109 (52%), Positives = 72/109 (66%)

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             L D   LLELA+E DD     E    L  ++ ++   +F  + SGE DS D YL++ A
Sbjct: 3   QGLDDVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQA 62

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLI 172
           G+GGTE+QDWA+MLLRMY RWAE R FKTE +E  +GE AGIKSAT+ I
Sbjct: 63  GSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKI 111


>gi|169840002|ref|ZP_02873190.1| peptide chain release factor 2 [candidate division TM7 single-cell
           isolate TM7a]
          Length = 86

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/86 (48%), Positives = 58/86 (67%)

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
            + E+ I++ D RID YR+ G GGQ VNTTDSAVRITH+PTG+ V  Q ERSQ +NK  A
Sbjct: 1   TTDEVNINDKDLRIDVYRSGGRGGQGVNTTDSAVRITHLPTGITVAIQNERSQIQNKETA 60

Query: 277 WNMLRAKLYELELQKREEIANIGESS 302
             +LR+KL +++ ++  E  N   + 
Sbjct: 61  LKILRSKLAQIQTEQHAETINDLRAR 86


>gi|326564767|gb|EGE14979.1| peptide chain release factor 2 [Moraxella catarrhalis 46P47B1]
          Length = 62

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 20/37 (54%)

Query: 8  NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKM 44
             GG+FD ++  +RL  +N + E+P +W N   A  
Sbjct: 3  KSFGGIFDIESKKERLEEVNLELENPDIWNNPDLATK 39


>gi|283780964|ref|YP_003371719.1| peptide chain release factor I [Pirellula staleyi DSM 6068]
 gi|283439417|gb|ADB17859.1| Class I peptide chain release factor [Pirellula staleyi DSM 6068]
          Length = 191

 Score = 51.3 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 7/112 (6%)

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
            S   V      ++ +E    +C+I+  R  G GGQH N  ++AV ITH PTG+  Q  +
Sbjct: 18  ASLAMVDAPHPAALPLEKLARECQIEFTRRGGPGGQHRNKVETAVVITHQPTGLAGQASE 77

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIA-------NIGESSKTEIGWGR 310
            RSQ  N+ +A+  LR +L      +RE  A          +    +I  G 
Sbjct: 78  TRSQDHNREEAYQRLRIELATGLRTRREPTAPISPLWEKFRKGRAVQINPGH 129


>gi|207108877|ref|ZP_03243039.1| peptide chain release factor 2 [Helicobacter pylori
          HPKX_438_CA4C1]
          Length = 85

 Score = 51.3 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 37/71 (52%)

Query: 3  LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
          L  + + +  +   +   Q L  +  + EDP+ WQ+V++A+   +E+  L+  +   ++ 
Sbjct: 13 LQNKCDNIALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEKVRLNRLLETYQKT 72

Query: 63 QDRLCDNLILL 73
          +D L +++  L
Sbjct: 73 KDSLDESVDCL 83


>gi|291533126|emb|CBL06239.1| hypothetical protein MHY_13580 [Megamonas hypermegale ART12/1]
          Length = 121

 Score = 51.0 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 45/95 (47%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
             +P  W +  +A+ + +E   +   +   K I  +  +  IL E+ +E+ D ++  +  
Sbjct: 1   MGEPTFWDDPDQAQKITQELNGVKAGVDKYKNILHKFEEMQILWEMGMEDKDETVCDDVE 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
             ++ I   +E  + E LLSG+ D+N+A  +    
Sbjct: 61  AEIKEINEAIEQLELELLLSGKYDANNAIFDSTCR 95


>gi|259235601|gb|ACW20312.1| peptide release factor protein 2 [Francisella cf. novicida 3523]
          Length = 111

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/113 (33%), Positives = 63/113 (55%), Gaps = 2/113 (1%)

Query: 30  TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETS 89
            ED  +W N   A+ L +++  L+N +   + I + L     LLELA E++         
Sbjct: 1   LEDGSIWDNPEYAQNLGKQKVELENVVHNCEHISETLETLSELLELAEEDETLMQEIAKD 60

Query: 90  DNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYT 142
                 ++  E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA ML+RMY 
Sbjct: 61  TQDVASEI--EKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWAEMLMRMYM 111


>gi|297851766|ref|XP_002893764.1| hypothetical protein ARALYDRAFT_473511 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339606|gb|EFH70023.1| hypothetical protein ARALYDRAFT_473511 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 256

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/116 (35%), Positives = 53/116 (45%), Gaps = 9/116 (7%)

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
                V          +     CR++T+R SG GGQH N  DSAVR+ H+PTG+V Q  +
Sbjct: 75  SVVADVQSPNYLKFTDDELMKQCRLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVAQAVE 134

Query: 266 ERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI---------GWGRQI 312
           +RSQHKN+A A N LR  L      K +  A        +I           G QI
Sbjct: 135 DRSQHKNRASALNRLRTLLAIKVRNKVDLEAYAPPPELLQILPPKSTIRTSSGSQI 190


>gi|297517598|ref|ZP_06935984.1| peptide chain release factor 1 [Escherichia coli OP50]
          Length = 92

 Score = 50.6 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 21/76 (27%)

Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           +   +R   +     D     +    + L RE   L +      + Q    D      +
Sbjct: 9  LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMM 68

Query: 76 ALEEDDCSILQETSDN 91
            + +   + Q+    
Sbjct: 69 LDDPEMREMAQDELRE 84


>gi|110224569|emb|CAJ98782.1| peptide release factor protein 2 [Francisella novicida]
 gi|259236249|gb|ACW20342.1| PrfB [Francisella sp. FnSp1]
          Length = 101

 Score = 50.2 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 2/103 (1%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           D  +W N   A+ L +++  L+N +   + I + L     L++LA E++           
Sbjct: 1   DGSIWDNPEYAQNLGKQKVELENVVHNCEHISETLQTLTELIDLAEEDESLMQEIAKDTQ 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
               ++  E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA
Sbjct: 61  DVASEI--EKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWA 101


>gi|94269500|ref|ZP_01291480.1| ABC transporter related [delta proteobacterium MLMS-1]
 gi|93451197|gb|EAT02108.1| ABC transporter related [delta proteobacterium MLMS-1]
          Length = 301

 Score = 50.2 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 4/61 (6%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQH----LDNAISFIKEIQDRLCDNL 70
           + D    R + L  +  DP  +    +   L +E       L++      ++Q  L    
Sbjct: 240 EVDKLEGRKAALEKQLADPETYNRQDQFTELSKEYAEVQRRLESLYEQWDQLQQELETLQ 299

Query: 71  I 71
            
Sbjct: 300 T 300


>gi|94263448|ref|ZP_01287261.1| ABC transporter related [delta proteobacterium MLMS-1]
 gi|93456178|gb|EAT06317.1| ABC transporter related [delta proteobacterium MLMS-1]
          Length = 682

 Score = 50.2 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 4/61 (6%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQH----LDNAISFIKEIQDRLCDNL 70
           + D    R + L  +  DP  +    +   L +E       L++      ++Q  L    
Sbjct: 621 EVDKLEGRKAALEKQLADPETYNRQDQFTELSKEYAEVQRRLESLYEQWDQLQQELETLQ 680

Query: 71  I 71
            
Sbjct: 681 T 681


>gi|12329992|emb|CAC24560.1| mitochondrial peptide chain release factor [Platichthys flesus]
          Length = 183

 Score = 50.2 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 43/190 (22%), Positives = 76/190 (40%), Gaps = 12/190 (6%)

Query: 50  QHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLS 109
           + L+   S ++       ++  ++++  EE+             +I    E      + +
Sbjct: 1   RDLEEVRSLLQGSAGAKDEDEQVMQMLKEEE--------EHISSKILALREDLIKALVPA 52

Query: 110 GEADSNDAYLEVHAG--AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS 167
              DS++  LEV +G   GG   Q +   +  MY  +A  + +  E       +  G+  
Sbjct: 53  DPLDSSNDLLEVVSGRTTGGDICQQFTKEMFDMYQGFAFYKNWDFEVYNYTSADFGGLHH 112

Query: 168 ATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRH--TSFSSIWVYPVVDDSIEIEISE 225
           A + I G N Y  LK E G HR+ RI     +SR     + +   +        ++ I  
Sbjct: 113 AAVRIAGDNVYRHLKHEGGTHRVQRIPEVGLSSRMQRIHTGTMTVIILPQPVEFDVHIDP 172

Query: 226 SDCRIDTYRA 235
            D RIDT+RA
Sbjct: 173 KDLRIDTFRA 182


>gi|39943940|ref|XP_361507.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|58257471|gb|AAW69357.1| peptide chain release factor-like protein [Magnaporthe grisea]
 gi|145014700|gb|EDJ99268.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 195

 Score = 49.8 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 13/154 (8%)

Query: 163 AGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE 222
           AG    ++  +      + +    +      S +     +  +F++ W+      S    
Sbjct: 5   AGHMMISIFARCRQVVSFSQSIGALSHHSGRSGWSHPMPQARTFTTSWLPLKQMPSRPKP 64

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
             E++      + SG GGQ +N T+SAV++ HIPTG+VV+CQ+ RS+ +N+  A  +L  
Sbjct: 65  PPETEIEESFLKGSGPGGQKINKTNSAVQLKHIPTGIVVKCQETRSRDQNRKIARQLLAT 124

Query: 283 KLYEL-------------ELQKREEIANIGESSK 303
           +L +L                K+   A    + K
Sbjct: 125 RLDDLNNGDQSRSAIVGAHKVKKRASAAKKSARK 158


>gi|116878616|ref|YP_357940.2| putative peptide chain release factor [Pelobacter carbinolicus DSM
           2380]
 gi|114843252|gb|ABA89770.2| putative peptide chain release factor [Pelobacter carbinolicus DSM
           2380]
          Length = 138

 Score = 49.4 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 4/118 (3%)

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
           +  +S   S  +R  S  +    P    +  + I++ D  I  ++A G GGQH N T++A
Sbjct: 1   MTHMSVLRSIDKRKISTMAGLKRPAPSRNGVMTINKQDLDITFFKAGGPGGQHRNKTETA 60

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA----NIGESSK 303
           VRI H P+G+ V   + RS+  N   A   L  +L  +  + R  IA          +
Sbjct: 61  VRIHHRPSGITVTASERRSRQANIEHALERLAQRLEAMRRKPRRRIATKPGKAARERR 118


>gi|281599646|gb|ADA72630.1| putative peptide chain release factor H [Shigella flexneri 2002017]
 gi|313646632|gb|EFS11091.1| putative peptide chain release factor H [Shigella flexneri 2a str.
           2457T]
 gi|332761634|gb|EGJ91914.1| putative peptide chain release factor H [Shigella flexneri 4343-70]
 gi|332761778|gb|EGJ92057.1| putative peptide chain release factor H [Shigella flexneri 2747-71]
 gi|332764451|gb|EGJ94684.1| putative peptide chain release factor H [Shigella flexneri K-671]
 gi|332768583|gb|EGJ98765.1| putative peptide chain release factor H [Shigella flexneri 2930-71]
 gi|333008731|gb|EGK28195.1| putative peptide chain release factor H [Shigella flexneri K-218]
 gi|333009717|gb|EGK29167.1| putative peptide chain release factor H [Shigella flexneri VA-6]
 gi|333010787|gb|EGK30213.1| putative peptide chain release factor H [Shigella flexneri K-272]
 gi|333021285|gb|EGK40538.1| putative peptide chain release factor H [Shigella flexneri K-227]
 gi|333022100|gb|EGK41343.1| putative peptide chain release factor H [Shigella flexneri K-304]
          Length = 131

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 5/119 (4%)

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           + + G NA+   +   G  + +  SPY  +  R   F  I        + + +      R
Sbjct: 18  ISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 72

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
            +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + +
Sbjct: 73  YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLDQQQ 131


>gi|320352217|ref|YP_004193556.1| ABC transporter-like protein [Desulfobulbus propionicus DSM 2032]
 gi|320120719|gb|ADW16265.1| ABC transporter related protein [Desulfobulbus propionicus DSM
           2032]
          Length = 666

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 7/68 (10%), Positives = 20/68 (29%), Gaps = 1/68 (1%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS-FIKEIQDRLCDNLILL 73
           + +    R + L     DP L+ +        +E   ++  +    +  ++       + 
Sbjct: 599 EIERYESRKAELEALMADPDLYGDQERWSATSKEYGQVERHLERAYQRWEEAQQAIEAIE 658

Query: 74  ELALEEDD 81
                 D 
Sbjct: 659 REVAAHDQ 666


>gi|24111726|ref|NP_706236.1| peptide chain release factor 2 [Shigella flexneri 2a str. 301]
 gi|30061853|ref|NP_836024.1| peptide chain release factor 2 [Shigella flexneri 2a str. 2457T]
 gi|24050507|gb|AAN41943.1| probable peptide chain release factor [Shigella flexneri 2a str.
           301]
 gi|30040097|gb|AAP15830.1| probable peptide chain release factor [Shigella flexneri 2a str.
           2457T]
          Length = 151

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 5/119 (4%)

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           + + G NA+   +   G  + +  SPY  +  R   F  I        + + +      R
Sbjct: 38  ISLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGI-----GRFTADEQEQSDAIR 92

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
            +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK  A  ++  KL + +
Sbjct: 93  YETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLDQQQ 151


>gi|260792422|ref|XP_002591214.1| hypothetical protein BRAFLDRAFT_247522 [Branchiostoma floridae]
 gi|229276417|gb|EEN47225.1| hypothetical protein BRAFLDRAFT_247522 [Branchiostoma floridae]
          Length = 99

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 4/74 (5%)

Query: 277 WNMLRAKLYELELQKREEIANIGESSK-TEIGWGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
              ++A+LY+++L ++     +    +        +IR+Y       V D R  +   + 
Sbjct: 1   MTTIQARLYQMKLDQQRSQQQLARQQQMGTAARSEKIRTYNF-TQDRVTDHRAGVNMFNL 59

Query: 336 SDVLDG--DLDDFM 347
            D L G   LD+ +
Sbjct: 60  QDFLLGGDRLDEMI 73


>gi|12322377|gb|AAG51209.1|AC051630_6 peptide chain release factor, putative; 8726-9996 [Arabidopsis
           thaliana]
          Length = 255

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 51/97 (52%), Gaps = 9/97 (9%)

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
              CR++T+R SG GGQH N  DSAVR+ H+PTG+V Q  ++RSQHKN+A A N LR  L
Sbjct: 95  MKQCRLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVAQAVEDRSQHKNRASALNRLRTLL 154

Query: 285 YELELQKREEIANIGESSKTEI---------GWGRQI 312
                 K +  A        +I           G QI
Sbjct: 155 AIKVRNKVDIEAYAPPPELLQILPPKSTIRTSSGSQI 191


>gi|30692851|ref|NP_174601.2| peptide chain release factor, putative [Arabidopsis thaliana]
 gi|12322576|gb|AAG51290.1|AC027035_13 unknown protein [Arabidopsis thaliana]
 gi|26450075|dbj|BAC42157.1| putative peptide chain release factor [Arabidopsis thaliana]
 gi|29824307|gb|AAP04114.1| putative peptide chain release factor [Arabidopsis thaliana]
 gi|332193463|gb|AEE31584.1| Class I peptide chain release factor [Arabidopsis thaliana]
          Length = 257

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/97 (41%), Positives = 51/97 (52%), Gaps = 9/97 (9%)

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
              CR++T+R SG GGQH N  DSAVR+ H+PTG+V Q  ++RSQHKN+A A N LR  L
Sbjct: 95  MKQCRLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVAQAVEDRSQHKNRASALNRLRTLL 154

Query: 285 YELELQKREEIANIGESSKTEI---------GWGRQI 312
                 K +  A        +I           G QI
Sbjct: 155 AIKVRNKVDIEAYAPPPELLQILPPKSTIRTSSGSQI 191


>gi|224127830|ref|XP_002329188.1| predicted protein [Populus trichocarpa]
 gi|222870969|gb|EEF08100.1| predicted protein [Populus trichocarpa]
          Length = 257

 Score = 48.3 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/63 (49%), Positives = 42/63 (66%)

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
              C +DT++ASG GGQH N  +SAVR+ H+PTG++ Q  ++RSQH N+A A   LRA L
Sbjct: 99  MRQCEMDTFKASGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHMNRASALKRLRALL 158

Query: 285 YEL 287
              
Sbjct: 159 AIR 161


>gi|225629578|ref|ZP_03787603.1| Protein chain release factor B [Wolbachia endosymbiont of
          Muscidifurax uniraptor]
 gi|225591567|gb|EEH12582.1| Protein chain release factor B [Wolbachia endosymbiont of
          Muscidifurax uniraptor]
          Length = 69

 Score = 48.3 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 29/52 (55%)

Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
          RL  L+++  +  LWQ+  +A+ +++ER  + N +    +++    D + L+
Sbjct: 2  RLEELDSQASNDDLWQDNQKAQEVLKERSKIKNDVESFLKLESDYNDAISLM 53


>gi|169838095|ref|ZP_02871283.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [candidate
          division TM7 single-cell isolate TM7a]
          Length = 157

 Score = 48.3 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 24/73 (32%)

Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           D+ V +   L  K  DP +  +  +     +    +D  +      + R  +   L E 
Sbjct: 5  LDDVVLKHKELTEKLMDPEVVSDPKKIMEYNKALNSIDEVVKKYTYYKSRKEELEGLKED 64

Query: 76 ALEEDDCSILQET 88
             E D  + +  
Sbjct: 65 LKIEKDAEMKEMM 77


>gi|148988471|ref|ZP_01819918.1| peptide chain release factor 1 [Streptococcus pneumoniae
          SP6-BS73]
 gi|147926152|gb|EDK77226.1| peptide chain release factor 1 [Streptococcus pneumoniae
          SP6-BS73]
          Length = 67

 Score = 48.3 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 17/55 (30%)

Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
                R   L     DP +  +      L +E     + +   +E +  L +N 
Sbjct: 7  LQAVEDRYEELGELLSDPDVVSDTKRFMELSKEEASNRDTVIAYREYKQVLQNNR 61


>gi|47226435|emb|CAG08451.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 156

 Score = 48.3 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 8/108 (7%)

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
            F  ++            ++E D      R SG GGQ  N T + V + HIP+G+VV+C 
Sbjct: 36  GFLCVFAAGKKGLIDPPVLNEDDLEEQFVRGSGPGGQATNKTSNCVVLKHIPSGIVVKCH 95

Query: 265 QERSQHKNKAQAWNMLRAKLYELEL--------QKREEIANIGESSKT 304
           Q RS   N+ +A +++R KL  L+         +K+E      +  K 
Sbjct: 96  QTRSVDINRKRARDIMREKLDVLQKGELSEILVKKKESELRKQDKRKK 143


>gi|148252694|ref|YP_001237279.1| class I peptide chain release factor domain-containing protein
           [Bradyrhizobium sp. BTAi1]
 gi|146404867|gb|ABQ33373.1| putative Class I peptide chain release factor domain protein
           [Bradyrhizobium sp. BTAi1]
          Length = 207

 Score = 48.3 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 3/153 (1%)

Query: 158 HDGEEAGIKSATLLIKGPNAYGWLKGEQ-GVHRLVRISPYDSNSRRHTSFSSIWVYPVVD 216
           ++ +  G  SA +++ GP A    +    G    V  SP   +  R   F  I   P   
Sbjct: 42  NEADRLGPASAIVVLDGPLADQIAQRWTQGPLLWVCRSPLRPHHGRKNWFVGIVDLP--L 99

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
                +++ +D R +++RA G GGQH N T+SAVR  H+PTG+    +  RSQH+N+A A
Sbjct: 100 PHQVPDLAAADVRCESFRAGGPGGQHQNKTESAVRAIHLPTGLTAIARDGRSQHRNRALA 159

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG 309
              L A L           A +  ++   +  G
Sbjct: 160 LTRLAALLDGRARLAEAGEARLVHAAHDRVQRG 192


>gi|302791615|ref|XP_002977574.1| hypothetical protein SELMODRAFT_417426 [Selaginella moellendorffii]
 gi|300154944|gb|EFJ21578.1| hypothetical protein SELMODRAFT_417426 [Selaginella moellendorffii]
          Length = 207

 Score = 48.3 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/59 (50%), Positives = 43/59 (72%)

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            C++DT+RA+G GGQH N T+SAVR+ H+PTG+V Q  ++RSQH+N+  A   LR  + 
Sbjct: 48  QCKMDTFRATGPGGQHRNKTESAVRLKHLPTGLVSQASEDRSQHRNRDSAVQRLRHTIA 106


>gi|302786792|ref|XP_002975167.1| hypothetical protein SELMODRAFT_415236 [Selaginella moellendorffii]
 gi|300157326|gb|EFJ23952.1| hypothetical protein SELMODRAFT_415236 [Selaginella moellendorffii]
          Length = 411

 Score = 48.3 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/59 (50%), Positives = 43/59 (72%)

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            C++DT+RA+G GGQH N T+SAVR+ H+PTG+V Q  ++RSQH+N+  A   LR  + 
Sbjct: 48  QCKMDTFRATGPGGQHRNKTESAVRLKHLPTGLVSQASEDRSQHRNRESAVQRLRHTIA 106


>gi|77415301|ref|ZP_00791262.1| peptide chain release factor 1 [Streptococcus agalactiae 515]
 gi|77158648|gb|EAO69998.1| peptide chain release factor 1 [Streptococcus agalactiae 515]
          Length = 53

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 17/52 (32%)

Query: 22 RLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
          R   L     DP +  +      L RE  +    ++  +E +  + +     
Sbjct: 1  RYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVISNISDAE 52


>gi|71027353|ref|XP_763320.1| peptide chain release factor 1 [Theileria parva strain Muguga]
 gi|68350273|gb|EAN31037.1| peptide chain release factor 1, putative [Theileria parva]
          Length = 299

 Score = 47.9 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 58/228 (25%), Positives = 93/228 (40%), Gaps = 22/228 (9%)

Query: 35  LWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN---LILLELALEEDDCSILQETSDN 91
             +   E+    +E       +S   +I  ++  +     L ++ +   D +        
Sbjct: 48  FIEEPNES---TKELVD-SEILSLYHQIYPQILQHSLGENLTDMNVNLRDMNENLRDEFV 103

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFK 151
             R KL        S      + +   L+V  G GG ES  +A  L  MY         K
Sbjct: 104 NLRRKLVDMQNSLFSGSLHTLNYHKILLQVLQGVGGEESGKFAAELYDMYANICNLNNLK 163

Query: 152 TEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWV 211
                        IK     ++        + E GVHR+ R+    ++ R  TS + + V
Sbjct: 164 H------------IKHPNNTLEIFQGLDRFRYEFGVHRVQRVPF--NSRRIQTSSAVVTV 209

Query: 212 YPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 259
            P  +   +I I  SD  ++T R+SG+GGQ VN +++AVRITHIPTG+
Sbjct: 210 VPHFNV-EDINIKSSDLMVETMRSSGSGGQSVNKSETAVRITHIPTGI 256


>gi|149626821|ref|XP_001515177.1| PREDICTED: similar to peptide chain release factor 1, putative,
           partial [Ornithorhynchus anatinus]
          Length = 612

 Score = 47.1 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 62/238 (26%), Positives = 95/238 (39%), Gaps = 21/238 (8%)

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++   CD     +L     D   L  TS    R KL     Q          +      +
Sbjct: 41  VESDCCDASATQQLLFRVFDEICLGATSQPKTRTKLTQLKSQLCCGDLYRTPNPTNGGGI 100

Query: 122 HAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWL 181
             G GG E+  +AN L  MY  +      +   +  +  E          +       +L
Sbjct: 101 TPGIGGAEAAYFANELFEMYKNFCHSTNIQNTQINQNTLE-------IFDLGFSQNAKYL 153

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP------------VVDDSIEIEISESDCR 229
             E GVHR+ RI    +++R  TS + + V P                 I      SD  
Sbjct: 154 LYEFGVHRVQRIPK--NSNRIQTSTAVVTVVPTGWSSCHGGRGSKDSPHIGDSFKPSDVI 211

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           ++T R+ GAGGQ VN +++AVR+TH+PTG+ V CQ   SQ  NK+ A   ++    ++
Sbjct: 212 METMRSRGAGGQSVNKSETAVRVTHVPTGMSVSCQDTSSQIDNKSLALGKVKGMSLDM 269


>gi|209736218|gb|ACI68978.1| C12orf65 homolog [Salmo salar]
          Length = 166

 Score = 47.1 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 3/105 (2%)

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
            S + +      D      ++E +      R SG GGQ  N T + V + HIPTG+VV+C
Sbjct: 32  VSLAHVQSNGKKDYIDLPVLNEDELDEQFVRGSGPGGQATNKTSNCVVLRHIPTGIVVKC 91

Query: 264 QQERSQHKNKAQAWNMLRAKL---YELELQKREEIANIGESSKTE 305
            Q RS   N+ +A  ++R KL   Y+ E     +        K +
Sbjct: 92  HQTRSVETNRKRARRIMREKLEVTYKGEESDILKNKKESIQRKQD 136


>gi|72012906|ref|XP_786280.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115976395|ref|XP_001185479.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 101

 Score = 46.7 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 31/86 (36%), Gaps = 15/86 (17%)

Query: 277 WNMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRS-------YVLQPYQMVKDL 326
             ML+ ++Y   L   ++ ++      +++  G    +IR+       Y  Q    + D 
Sbjct: 1   MTMLQPRIYNRILA--DQTSSERSMRCSQVSRGGRSEKIRTTNPNLYNYNYQ-QDRITDH 57

Query: 327 RTNIEKTSPSDVLDGD--LDDFMKAT 350
           R           L G   LD+ + + 
Sbjct: 58  RRGRTVHGVPAYLLGSELLDEMVTSY 83


>gi|291239031|ref|XP_002739431.1| PREDICTED: C12orf65 homolog [Saccoglossus kowalevskii]
          Length = 160

 Score = 46.7 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 9/93 (9%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I+E +      R SG GGQ  N T + V + HIP+G+ V+C Q RSQ KN+  +  +LR 
Sbjct: 51  INEDELDEQFVRGSGPGGQATNKTSNCVVLKHIPSGITVKCHQTRSQSKNRELSRRILRE 110

Query: 283 KLY---------ELELQKREEIANIGESSKTEI 306
           KL           +  +K+EE     +  K+++
Sbjct: 111 KLDVFYKGDESIIVIEKKKEEKRRQEKKRKSKV 143


>gi|213514146|ref|NP_001134302.1| CL065 protein [Salmo salar]
 gi|209732210|gb|ACI66974.1| C12orf65 homolog [Salmo salar]
          Length = 166

 Score = 46.3 bits (108), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 3/105 (2%)

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
            S + +      D      ++E +      R SG GGQ  N T + V + HIPTG+VV+C
Sbjct: 32  VSLAHVQSNGKKDYIDLPVLNEDELDEQFVRGSGPGGQATNKTSNCVVLRHIPTGIVVKC 91

Query: 264 QQERSQHKNKAQAWNMLRAKL---YELELQKREEIANIGESSKTE 305
            Q RS   N+ +A  ++R KL   Y+ E     +        K +
Sbjct: 92  HQTRSVETNRKRARQIMREKLEVTYKGEESDILKNKKESIQRKQD 136


>gi|146343293|ref|YP_001208341.1| class I peptide chain release factor domain-containing protein
           [Bradyrhizobium sp. ORS278]
 gi|146196099|emb|CAL80126.1| putative Class I peptide chain release factor domain protein
           [Bradyrhizobium sp. ORS278]
          Length = 207

 Score = 46.3 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 40/128 (31%), Positives = 58/128 (45%), Gaps = 2/128 (1%)

Query: 182 KGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQ 241
           +  +G    V  SP   +  R   F  I   P    +    +S SD R +++RA G GGQ
Sbjct: 67  RWTRGSLLWVCRSPLRPHHGRKNWFVGIVDLP--LPAQLPMLSTSDVRFESFRAGGPGGQ 124

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGES 301
           H N T+SAVR  H+P+G+    +  RSQH NKA A   L A L             + ++
Sbjct: 125 HQNKTESAVRAVHLPSGLTAIARDGRSQHGNKALAIARLAALLDGRARVAEAGEVRLVQA 184

Query: 302 SKTEIGWG 309
           +   +  G
Sbjct: 185 AHGRVERG 192


>gi|255945923|ref|XP_002563729.1| Pc20g12440 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211588464|emb|CAP86573.1| Pc20g12440 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 186

 Score = 46.3 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 36/100 (36%), Positives = 55/100 (55%)

Query: 189 RLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDS 248
           RL   +   + +     FS   + P       ++IS++D  I   + +G GGQ +N T+S
Sbjct: 4   RLHWWTSSRTLAAPARLFSQTPIVPAKPLPPRLKISDADISISYLKGTGPGGQKINKTNS 63

Query: 249 AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           AV+I H P+GVVV+CQ  RSQ +N   A ++L  K+  LE
Sbjct: 64  AVQIIHKPSGVVVKCQATRSQSQNAKIARSLLADKIEALE 103


>gi|207094293|ref|ZP_03242080.1| hypothetical protein HpylHP_16247 [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 34

 Score = 46.3 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 288 ELQKREEIANIGESSKTEIGWGRQIRSYVLQ 318
           + +++   A        +IGWG QIRSYVL 
Sbjct: 4   KQEEQAAKAAGIRGDVKDIGWGSQIRSYVLH 34


>gi|225715830|gb|ACO13761.1| C12orf65 homolog [Esox lucius]
          Length = 167

 Score = 46.0 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 3/108 (2%)

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
                 +      D      ++E +      R SG GGQ  N T + V + H PTG+VV+
Sbjct: 32  AVGIGKVQTAGRKDYIDLPALNEDELDEQFVRGSGPGGQATNKTSNCVVLRHNPTGIVVK 91

Query: 263 CQQERSQHKNKAQAWNMLRAKL---YELELQKREEIANIGESSKTEIG 307
           C Q RS   N+ +A  ++R KL   Y+ E     +        K + G
Sbjct: 92  CHQTRSVETNRKRARQIMREKLEVIYKGEESDILKNKKESIQRKQDKG 139


>gi|55639161|ref|XP_509459.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like isoform 5 [Pan troglodytes]
 gi|114647627|ref|XP_001169334.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like isoform 1 [Pan troglodytes]
 gi|114647629|ref|XP_001169362.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
 gi|114647631|ref|XP_001169383.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like isoform 3 [Pan troglodytes]
 gi|114647633|ref|XP_001169404.1| PREDICTED: hypothetical protein isoform 4 [Pan troglodytes]
 gi|332840720|ref|XP_003314049.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like [Pan troglodytes]
 gi|332840723|ref|XP_003314050.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like [Pan troglodytes]
          Length = 166

 Score = 45.6 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 7/103 (6%)

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + +    D    + + E++      +  G GGQ  N T + V + HIP+G+VV+C Q RS
Sbjct: 41  VQMAGKKDYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRS 100

Query: 269 QHKNKAQAWNMLRAKLYELE-------LQKREEIANIGESSKT 304
             +N+  A  +L+ K+            ++++E     +  K 
Sbjct: 101 VDQNRKLARKILQEKVDVFYNGENSPVHKEKQEAVKKKQERKK 143


>gi|332030644|gb|EGI70332.1| Uncharacterized protein C12orf65-like protein [Acromyrmex
           echinatior]
          Length = 163

 Score = 45.6 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 36/92 (39%), Positives = 49/92 (53%)

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
            +D S   ++ E D      R SG GGQ  N T++AV + H PTG+VV+C + RSQ  NK
Sbjct: 47  YLDYSNVPKLDEIDLEEQFIRGSGPGGQATNKTNNAVLLKHKPTGLVVKCHETRSQWDNK 106

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTE 305
            +A  +L  KL  L  ++R   A I    K E
Sbjct: 107 KRAREILVTKLDNLLNKERSIEAQIHALEKKE 138


>gi|125528646|gb|EAY76760.1| hypothetical protein OsI_04716 [Oryza sativa Indica Group]
          Length = 246

 Score = 45.2 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 28/66 (42%), Positives = 41/66 (62%)

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
              C + T++ASG GGQH N  +SAVR+ H PTG++ Q  ++RSQH N+A A + LR  +
Sbjct: 83  MGQCEMGTFKASGPGGQHRNKRESAVRLRHRPTGIIAQAVEDRSQHMNRASALSRLRTLI 142

Query: 285 YELELQ 290
                +
Sbjct: 143 ALKVRK 148


>gi|213401645|ref|XP_002171595.1| peptide release factor [Schizosaccharomyces japonicus yFS275]
 gi|211999642|gb|EEB05302.1| peptide release factor [Schizosaccharomyces japonicus yFS275]
          Length = 144

 Score = 45.2 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 3/102 (2%)

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
              +VYP         + E+D      R  G GGQ +N T    ++ H P+G++V+CQ+ 
Sbjct: 19  RQSFVYPAFIQQRFYHLVEADLDETFIRGHGPGGQKINKTSIVCQLRHKPSGLIVRCQET 78

Query: 267 RSQHKNKAQAWNMLRAKLYEL---ELQKREEIANIGESSKTE 305
           RS+ +N+  A   L  KL  L   E  +  +        K +
Sbjct: 79  RSREQNRKIARKRLAEKLDLLANGEKSRLAQDRQRILRRKRQ 120


>gi|302761410|ref|XP_002964127.1| hypothetical protein SELMODRAFT_405812 [Selaginella moellendorffii]
 gi|300167856|gb|EFJ34460.1| hypothetical protein SELMODRAFT_405812 [Selaginella moellendorffii]
          Length = 388

 Score = 45.2 bits (105), Expect = 0.014,   Method: Composition-based stats.
 Identities = 13/32 (40%), Positives = 20/32 (62%)

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           KDLRTN E +  S ++ G+L+  + A L  K+
Sbjct: 66  KDLRTNAETSDISVIMGGNLEPLLTAYLMSKQ 97


>gi|330720433|gb|EGG98747.1| Peptide chain release factor 1 [gamma proteobacterium IMCC2047]
          Length = 44

 Score = 45.2 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 17/32 (53%)

Query: 324 KDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
            D R N+      ++++GD+D  ++A +   +
Sbjct: 2   TDHRINLTLYKLPEIMEGDMDSVIQALVNEHQ 33


>gi|326517198|dbj|BAJ99965.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 170

 Score = 45.2 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 28/66 (42%), Positives = 43/66 (65%)

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
            + C + T+++SG GGQH N  +SAVR+ H PTG+V Q  ++RSQHKN++ A + LR  +
Sbjct: 7   MAQCDMGTFKSSGPGGQHRNKRESAVRLRHHPTGIVAQAVEDRSQHKNRSSALSRLRTLI 66

Query: 285 YELELQ 290
                +
Sbjct: 67  ALKVRR 72


>gi|254443205|ref|ZP_05056681.1| ABC transporter, ATP-binding protein [Verrucomicrobiae bacterium
           DG1235]
 gi|198257513|gb|EDY81821.1| ABC transporter, ATP-binding protein [Verrucomicrobiae bacterium
           DG1235]
          Length = 644

 Score = 45.2 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 9/66 (13%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L+ +L       +  +   + S    +  DP  +++  +++ ++         I    E+
Sbjct: 575 LTDKLKKAEA--EIADLESQQSEYEKQMADPDFYKDPKKSQEVLTTYDDNKAKIEAAYEL 632

Query: 63  QDRLCD 68
              L D
Sbjct: 633 WSDLSD 638


>gi|225717004|gb|ACO14348.1| C12orf65 homolog [Esox lucius]
          Length = 167

 Score = 44.8 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 3/106 (2%)

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
                 +      D      ++E +      R SG GGQ  N T + V + H PTG+VV+
Sbjct: 32  AVGIGKVQAAGKKDYIDLPALNEDELDEQFVRGSGPGGQATNKTSNCVVLRHNPTGIVVK 91

Query: 263 CQQERSQHKNKAQAWNMLRAKL---YELELQKREEIANIGESSKTE 305
           C Q RS   N+ +A  ++R KL   Y+ E     +        K +
Sbjct: 92  CHQTRSVETNRKRARQIMREKLEVIYKGEESDILKNKKESIQRKQD 137


>gi|224071118|ref|XP_002189696.1| PREDICTED: similar to CL065 protein [Taeniopygia guttata]
          Length = 228

 Score = 44.8 bits (104), Expect = 0.018,   Method: Composition-based stats.
 Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 9/92 (9%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           ISE+D      R  G GGQ  N T++ V + HIP+G+VV+C Q RS  KN+  A  +L+ 
Sbjct: 119 ISEADLEEQFVRGDGPGGQATNKTNNCVVLKHIPSGIVVKCHQTRSLEKNRKIAREILQE 178

Query: 283 KLYE---------LELQKREEIANIGESSKTE 305
           K+Y           + +K  E     +  + +
Sbjct: 179 KVYLFYKGEDSDVFKEKKASEKQKQEKKRRAK 210


>gi|262196479|ref|YP_003267688.1| class I peptide chain release factor [Haliangium ochraceum DSM
           14365]
 gi|262079826|gb|ACY15795.1| Class I peptide chain release factor [Haliangium ochraceum DSM
           14365]
          Length = 196

 Score = 44.8 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 45/129 (34%), Positives = 65/129 (50%)

Query: 185 QGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVN 244
            G H LV  S       R   F+ + ++     +   EI   +  +   RA G GGQHVN
Sbjct: 54  VGTHVLVARSSRRGRRARKRWFAGVSIHAQQAATAVAEIRPDEVEVTASRAGGPGGQHVN 113

Query: 245 TTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           TTDSAVR+ H  +G+ V+   ERSQH+N++ A   LR  L E E ++R E A     +  
Sbjct: 114 TTDSAVRVRHKASGISVRVAGERSQHRNRSVALTRLRELLGEREQRERAERAKRRRRAHY 173

Query: 305 EIGWGRQIR 313
           ++  G  +R
Sbjct: 174 QLERGGAVR 182


>gi|194214381|ref|XP_001492966.2| PREDICTED: similar to My030 protein [Equus caballus]
          Length = 166

 Score = 44.8 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 3/119 (2%)

Query: 166 KSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
            S + L + P     ++      RL       S  R   + + + +    D      + E
Sbjct: 1   MSTSGLFRFPAPLTRIRTVSWGLRLWERPTLLSPGR---AVTRVQMAGKKDRPALPSLEE 57

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           S+      +  G GGQ  N T + V + H+P+G+VV+C Q RS  +N+  A  +L+ K+
Sbjct: 58  SELEEQFVKGHGPGGQATNKTSNCVVLKHMPSGIVVKCHQTRSVDQNRKLARKILQEKV 116


>gi|229368188|gb|ACQ59074.1| C12orf65 homolog [Anoplopoma fimbria]
          Length = 169

 Score = 44.8 bits (104), Expect = 0.020,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 8/106 (7%)

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           + + +    D      + E +      R SG GGQ  N T + V + HIP+G VV+C Q 
Sbjct: 38  TCVMIAGKKDLIDLPVLDEDELEEQFVRGSGPGGQATNKTGNCVVLKHIPSGTVVKCHQT 97

Query: 267 RSQHKNKAQAWNMLRAKLY--------ELELQKREEIANIGESSKT 304
           RS   N+ +A +++R KL         E+ ++K+E      E  + 
Sbjct: 98  RSVDINRKRARDIMREKLDVVYKGELSEIIVKKKESELRKQEKRRK 143


>gi|74198326|dbj|BAB28408.3| unnamed protein product [Mus musculus]
          Length = 142

 Score = 44.8 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 3/102 (2%)

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           + S++ V    D    + ++ES+      +  G GGQ  N T + V + H+P+G+VV+C 
Sbjct: 40  AASTVQVAGRKDYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCH 99

Query: 265 QERSQHKNKAQAWNMLRAKL---YELELQKREEIANIGESSK 303
           Q RS  +N+  A  +L+ K+   Y  E     +     E  K
Sbjct: 100 QTRSVDQNRKIARKVLQEKVDVFYNGENSPVHKEKLEAERRK 141


>gi|39996074|ref|NP_952025.1| peptidyl-tRNA hydrolase domain-containing protein [Geobacter
           sulfurreducens PCA]
 gi|39982839|gb|AAR34298.1| peptidyl-tRNA hydrolase domain protein [Geobacter sulfurreducens
           PCA]
 gi|298505090|gb|ADI83813.1| hydrolase, putative [Geobacter sulfurreducens KN400]
          Length = 107

 Score = 44.8 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 8/104 (7%)

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           + ++I ++D +++ YRASG GGQH NTTDSAVRI H+PTG+VVQ  + RSQ +N+ +A  
Sbjct: 1   MTVDIRDADIKVEYYRASGPGGQHRNTTDSAVRIRHLPTGIVVQASESRSQAQNREKAME 60

Query: 279 MLRAKLYELELQKREE--------IANIGESSKTEIGWGRQIRS 314
            LR  L + E + ++               + K  +G  +++RS
Sbjct: 61  RLRIALEKRERKAKKRIATTVPRGAREKRLTEKKLVGMKKKLRS 104


>gi|110224565|emb|CAJ98780.1| peptide release factor protein 2 [Francisella tularensis subsp.
           mediasiatica]
          Length = 101

 Score = 44.4 bits (103), Expect = 0.025,   Method: Composition-based stats.
 Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 2/103 (1%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           D  +W N   A+ L +++  L+N +   + I   L     LLEL  E++           
Sbjct: 1   DGSIWDNPEYAQNLGKQKVELENVVHNCEYISKTLETLSELLELGKEDESLMQEIAKDTQ 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
               ++  E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA
Sbjct: 61  NVASEI--EKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWA 101


>gi|242059479|ref|XP_002458885.1| hypothetical protein SORBIDRAFT_03g042170 [Sorghum bicolor]
 gi|241930860|gb|EES04005.1| hypothetical protein SORBIDRAFT_03g042170 [Sorghum bicolor]
          Length = 259

 Score = 44.4 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 29/66 (43%), Positives = 43/66 (65%)

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
              C + T++ASG GGQH N  +SAVR+ H+PTG++ Q  ++RSQHKN+A A + LR  +
Sbjct: 96  MEQCDMGTFKASGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHKNRASALSRLRTLI 155

Query: 285 YELELQ 290
                +
Sbjct: 156 ALKVRR 161


>gi|224924358|gb|ACN69129.1| mitochondrial polypeptide chain release factor [Stomoxys
           calcitrans]
          Length = 183

 Score = 44.4 bits (103), Expect = 0.030,   Method: Composition-based stats.
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 7/90 (7%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
             ++E D      R SG GGQ +N T + V + H+PT +VV+C   RS  KN+ +A  +L
Sbjct: 60  PTLNEEDLEETFTRGSGPGGQALNKTSNCVLLRHLPTNIVVKCHIHRSAQKNRVEARKIL 119

Query: 281 RAKL-------YELELQKREEIANIGESSK 303
             KL       Y ++ Q ++         K
Sbjct: 120 LEKLDAQLNGEYSIQSQLKQLENKKSAERK 149


>gi|60679074|gb|AAX33818.1| putative peptide chain release factor 2 [Campylobacter jejuni
           subsp. jejuni]
          Length = 40

 Score = 44.0 bits (102), Expect = 0.030,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 20/37 (54%)

Query: 319 PYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLAIKK 355
           PYQ VKD R+    +   ++LDGD+   ++  L   K
Sbjct: 2   PYQQVKDNRSGEAFSQVDNILDGDIKKMIEGVLIALK 38


>gi|302343659|ref|YP_003808188.1| class I peptide chain release factor [Desulfarculus baarsii DSM
           2075]
 gi|301640272|gb|ADK85594.1| Class I peptide chain release factor [Desulfarculus baarsii DSM
           2075]
          Length = 113

 Score = 44.0 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 25/73 (34%), Positives = 40/73 (54%)

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
            S      E +   + +RASG GGQH N  ++ VR+TH+P+G+VV   + RS+ +N+  A
Sbjct: 1   MSKPSPPPEHELSWEYFRASGPGGQHRNKVETGVRLTHLPSGLVVSATERRSREQNRQAA 60

Query: 277 WNMLRAKLYELEL 289
              L  +L +   
Sbjct: 61  LERLARRLADQAK 73


>gi|149063270|gb|EDM13593.1| rCG21417, isoform CRA_a [Rattus norvegicus]
          Length = 220

 Score = 44.0 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 24/80 (30%), Positives = 44/80 (55%)

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           + +++ V    D    + ++ES+      +  G GGQ  N T + V + H+P+G+VV+C 
Sbjct: 76  AATAMQVAGKKDYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCH 135

Query: 265 QERSQHKNKAQAWNMLRAKL 284
           Q RS  +N+  A  +L+ K+
Sbjct: 136 QTRSVDQNRKMARKILQEKV 155


>gi|226320894|ref|ZP_03796445.1| Peptide chain release factor 1 [Borrelia burgdorferi 29805]
 gi|226233666|gb|EEH32396.1| Peptide chain release factor 1 [Borrelia burgdorferi 29805]
          Length = 86

 Score = 44.0 bits (102), Expect = 0.031,   Method: Composition-based stats.
 Identities = 34/86 (39%), Positives = 51/86 (59%)

Query: 107 LLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK 166
           +   E DS +  +E+ AG GG E+  +AN L  MY +++EK+K+KTE +  ++ E  G K
Sbjct: 1   MPQDENDSKNIIIEIRAGTGGEEAALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFK 60

Query: 167 SATLLIKGPNAYGWLKGEQGVHRLVR 192
                IKG + +  LK E GVHR+ R
Sbjct: 61  EIIFEIKGKDVFKKLKYESGVHRVQR 86


>gi|218779987|ref|YP_002431305.1| ABC transporter [Desulfatibacillum alkenivorans AK-01]
 gi|218761371|gb|ACL03837.1| ABC transporter related [Desulfatibacillum alkenivorans AK-01]
          Length = 666

 Score = 44.0 bits (102), Expect = 0.032,   Method: Composition-based stats.
 Identities = 7/72 (9%), Positives = 26/72 (36%), Gaps = 3/72 (4%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-KE 61
           + +++              R + ++    DP ++ +  +++ L+ E Q + + +  +   
Sbjct: 588 IQKRVQEAEK--KISKLEAREAEISELLADPDVFSDSEKSQPLLEEYQKVKDGLDNLMTA 645

Query: 62  IQDRLCDNLILL 73
            +        L 
Sbjct: 646 WEADQEAIEELE 657


>gi|326469360|gb|EGD93369.1| peptidyl-tRNA hydrolase [Trichophyton tonsurans CBS 112818]
 gi|326483473|gb|EGE07483.1| hypothetical protein TEQG_06610 [Trichophyton equinum CBS 127.97]
          Length = 191

 Score = 44.0 bits (102), Expect = 0.033,   Method: Composition-based stats.
 Identities = 33/96 (34%), Positives = 47/96 (48%)

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R    F +  +           I ES+      + SG GGQ +N T SAV++ HIPT  V
Sbjct: 27  RNVRFFQASALSLAKQMPPRPTIDESEITGTYLKGSGPGGQKINKTSSAVQLIHIPTNTV 86

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIA 296
           V+CQ  RSQ +N+  A  +L  K+  LE  ++   A
Sbjct: 87  VKCQATRSQSQNRKIAKRILAEKIELLEKGEQSRAA 122


>gi|325185474|emb|CCA19957.1| unnamed protein product putative [Albugo laibachii Nc14]
          Length = 152

 Score = 44.0 bits (102), Expect = 0.035,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 3/99 (3%)

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
                    +      E D      + SG GGQ +N   + V + H PTG+ V+CQ+ R 
Sbjct: 22  CAANLFQTRNFASAFREEDLNEQFVKGSGKGGQKINKVRNCVLLKHSPTGIQVRCQKTRC 81

Query: 269 QHKNKAQAWNMLRAKLYEL---ELQKREEIANIGESSKT 304
              N+  A  +L  KL +L   E   R +     +  K 
Sbjct: 82  LDDNRRIARKLLTEKLDDLYNGEKSVRNQKIQKIQKRKA 120


>gi|213865384|ref|ZP_03387503.1| peptide chain release factor 1 [Salmonella enterica subsp.
          enterica serovar Typhi str. M223]
          Length = 55

 Score = 44.0 bits (102), Expect = 0.037,   Method: Composition-based stats.
 Identities = 6/47 (12%), Positives = 13/47 (27%)

Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           +   +R   +     D     +    + L RE   L +      + 
Sbjct: 9  LEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDW 55


>gi|253700800|ref|YP_003021989.1| class I peptide chain release factor [Geobacter sp. M21]
 gi|251775650|gb|ACT18231.1| Class I peptide chain release factor [Geobacter sp. M21]
          Length = 105

 Score = 44.0 bits (102), Expect = 0.037,   Method: Composition-based stats.
 Identities = 38/85 (44%), Positives = 52/85 (61%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +EI + D +++ YRASG GGQH NTTDSAVRI H+PTGVV Q  + RSQ +N+ +A   L
Sbjct: 1   MEIRDVDIKVEFYRASGPGGQHRNTTDSAVRIRHLPTGVVAQASESRSQFENREKAMERL 60

Query: 281 RAKLYELELQKREEIANIGESSKTE 305
              L   E + ++ +A        E
Sbjct: 61  AELLRRREQKAKKRVATKVPRRAKE 85


>gi|242214518|ref|XP_002473081.1| predicted protein [Postia placenta Mad-698-R]
 gi|220727819|gb|EED81727.1| predicted protein [Postia placenta Mad-698-R]
          Length = 268

 Score = 44.0 bits (102), Expect = 0.037,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 56/159 (35%), Gaps = 3/159 (1%)

Query: 146 EKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTS 205
           +   F    L I +  E G        +   +            +               
Sbjct: 85  DPESFDRFKLNITEHTELGSNDTIRDPQPVGSPHRNTHLARPILISSADAAKETPSTQVP 144

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
                +       +  E+ E D      R SG GGQ +N T++ V++ H PTG+ V CQ+
Sbjct: 145 RYYSQLKKAHKQRVVPELKEEDLEEAFVRGSGPGGQSINKTENNVQLLHKPTGLRVSCQE 204

Query: 266 ERSQHKNKAQAWNMLRAKLYELE---LQKREEIANIGES 301
            RS  +N+  A  +L  KL  L    L K+E    + + 
Sbjct: 205 TRSLSQNRKLARRILLGKLDALYNPGLSKQEVKKALQQE 243


>gi|197927088|ref|NP_001102535.2| hypothetical protein LOC498179 [Rattus norvegicus]
 gi|195539878|gb|AAI68187.1| RGD1563482 protein [Rattus norvegicus]
          Length = 181

 Score = 44.0 bits (102), Expect = 0.038,   Method: Composition-based stats.
 Identities = 24/80 (30%), Positives = 44/80 (55%)

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           + +++ V    D    + ++ES+      +  G GGQ  N T + V + H+P+G+VV+C 
Sbjct: 37  AATAMQVAGKKDYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCH 96

Query: 265 QERSQHKNKAQAWNMLRAKL 284
           Q RS  +N+  A  +L+ K+
Sbjct: 97  QTRSVDQNRKMARKILQEKV 116


>gi|74180243|dbj|BAE24439.1| unnamed protein product [Mus musculus]
          Length = 152

 Score = 44.0 bits (102), Expect = 0.039,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 44/80 (55%)

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           + S++ V    D    + ++ES+      +  G GGQ  N T + V + H+P+G+VV+C 
Sbjct: 40  AASTVQVAGRKDYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCH 99

Query: 265 QERSQHKNKAQAWNMLRAKL 284
           Q RS  +N+  A  +L+ K+
Sbjct: 100 QTRSVDQNRKIARKVLQEKV 119


>gi|156064005|ref|XP_001597924.1| hypothetical protein SS1G_00010 [Sclerotinia sclerotiorum 1980]
 gi|154690872|gb|EDN90610.1| hypothetical protein SS1G_00010 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 201

 Score = 43.6 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 1/100 (1%)

Query: 194 SPYDSNSRRHTSFS-SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           +  +S+S    S   +  ++          I E++        SG GGQ +N T SAV++
Sbjct: 29  NVVNSSSIIKRSICSTTTLWKKKMPDRPAPIDEAEFTEVFLHGSGPGGQKINKTSSAVQL 88

Query: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
            HIPTG+V++ Q  RS+ +N+  A  ML  ++  LE  K 
Sbjct: 89  KHIPTGMVLKVQATRSRTQNRKIARQMLAERVELLEKGKE 128


>gi|197118419|ref|YP_002138846.1| hydrolase [Geobacter bemidjiensis Bem]
 gi|197087779|gb|ACH39050.1| hydrolase, putative [Geobacter bemidjiensis Bem]
          Length = 105

 Score = 43.6 bits (101), Expect = 0.040,   Method: Composition-based stats.
 Identities = 38/85 (44%), Positives = 52/85 (61%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
           +EI + D +++ YRASG GGQH NTTDSAVRI H+PTGVV Q  + RSQ +N+ +A   L
Sbjct: 1   MEIRDVDIKVEFYRASGPGGQHRNTTDSAVRIRHLPTGVVAQASESRSQFENREKAMERL 60

Query: 281 RAKLYELELQKREEIANIGESSKTE 305
              L   E + ++ +A        E
Sbjct: 61  AELLRRREQKAKKRVATKVPRRAKE 85


>gi|312370878|gb|EFR19185.1| hypothetical protein AND_22936 [Anopheles darlingi]
          Length = 225

 Score = 43.6 bits (101), Expect = 0.042,   Method: Composition-based stats.
 Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 6/130 (4%)

Query: 180 WLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIE----ISESDCRIDTYRA 235
             +    +     I+   S +    + +    + +   SI+      + E D      R 
Sbjct: 67  CSRYASCLLLWPTIAVRASTATTTITNAYSGGWRMFSKSIDNSRVPVLQEDDLEESFVRG 126

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE--LQKRE 293
           SG GGQ V  T++ V +TH PTG+VVQC   RS  +N+  A  +L  KL +L    Q  E
Sbjct: 127 SGPGGQSVAKTNNKVVLTHKPTGLVVQCHTSRSLFENRRIARQLLVTKLDQLINGEQSVE 186

Query: 294 EIANIGESSK 303
                 +  K
Sbjct: 187 AQRQRLDQRK 196


>gi|169597527|ref|XP_001792187.1| hypothetical protein SNOG_01549 [Phaeosphaeria nodorum SN15]
 gi|160707538|gb|EAT91198.2| hypothetical protein SNOG_01549 [Phaeosphaeria nodorum SN15]
          Length = 236

 Score = 43.6 bits (101), Expect = 0.043,   Method: Composition-based stats.
 Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 2/90 (2%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
              + + +SD        SG GGQ +N T SAV++ HIPTG+VV+ Q  RS+  N+  A 
Sbjct: 36  PPRVPLPDSDIIEKFLHGSGPGGQKINKTSSAVQLKHIPTGIVVKYQDTRSRTVNRKMAR 95

Query: 278 NMLRAKLYELEL--QKREEIANIGESSKTE 305
            +L+ ++ E EL    R ++    +S K +
Sbjct: 96  KILQERIEEAELGDDARTKVKQREKSRKKQ 125


>gi|61886963|ref|XP_584238.1| PREDICTED: chromosome 12 open reading frame 65 ortholog [Bos
           taurus]
 gi|297484729|ref|XP_002694521.1| PREDICTED: chromosome 12 open reading frame 65 ortholog [Bos
           taurus]
 gi|296478551|gb|DAA20666.1| chromosome 12 open reading frame 65 ortholog [Bos taurus]
          Length = 172

 Score = 43.6 bits (101), Expect = 0.043,   Method: Composition-based stats.
 Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 8/89 (8%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + E +      +  G GGQ  N T + V + H+P+G+VV+C Q RS  +N+  A  +L+ 
Sbjct: 55  LDERELEEQFVKGHGPGGQATNKTSNCVVLRHVPSGIVVKCHQTRSVDQNRKLARRILQE 114

Query: 283 KLYELE--------LQKREEIANIGESSK 303
           K+             +KRE      E  K
Sbjct: 115 KVDVFYNGENSLVCREKREAEKRKQERKK 143


>gi|126324306|ref|XP_001375022.1| PREDICTED: similar to RIKEN cDNA 2810006K23 gene [Monodelphis
           domestica]
          Length = 212

 Score = 43.6 bits (101), Expect = 0.044,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 2/100 (2%)

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
            +   P     R         V    D    + ++E D      +  G GGQ  N T + 
Sbjct: 63  WLWKKPVFLFPRM--GACGPQVTGKTDAHNLLPLNERDLEEQFVKGHGPGGQATNKTSNC 120

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL 289
           V + HIP+G+VV+C Q RS  +N+  A  +L+ K+     
Sbjct: 121 VVLKHIPSGIVVKCHQTRSVDQNRKLAREILQGKVDLFYR 160


>gi|229917818|ref|YP_002886464.1| ABC transporter [Exiguobacterium sp. AT1b]
 gi|229469247|gb|ACQ71019.1| ABC transporter related [Exiguobacterium sp. AT1b]
          Length = 633

 Score = 43.6 bits (101), Expect = 0.046,   Method: Composition-based stats.
 Identities = 7/66 (10%), Positives = 25/66 (37%), Gaps = 3/66 (4%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER-QHLDNAISFIK 60
           ++ +++  +      +    RL  +     +P ++ +   A+ L  E     ++  +   
Sbjct: 569 RIKQRIEEIEQA--IEQHENRLDEIEQLLCEPDVFNDFARAQELSTESDAAKESITALYA 626

Query: 61  EIQDRL 66
           E ++  
Sbjct: 627 EWEELH 632


>gi|171694017|ref|XP_001911933.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946957|emb|CAP73761.1| unnamed protein product [Podospora anserina S mat+]
          Length = 187

 Score = 43.6 bits (101), Expect = 0.046,   Method: Composition-based stats.
 Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 13/101 (12%)

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
             S      ES+      + SG GGQ +N T+SAV+I H+PT +V++CQ  RS+ +N+  
Sbjct: 1   MPSRPKPPPESEIEESFLKGSGPGGQKINKTNSAVQIKHLPTNIVIKCQATRSRSQNRKI 60

Query: 276 AWNMLRAKLYELE-------------LQKREEIANIGESSK 303
           A ++L  +L EL               +KR + A      K
Sbjct: 61  ARDILAERLDELYNGSQSRVAIVGSVKKKRADSAAKKSRRK 101


>gi|322801028|gb|EFZ21809.1| hypothetical protein SINV_15156 [Solenopsis invicta]
          Length = 220

 Score = 43.6 bits (101), Expect = 0.046,   Method: Composition-based stats.
 Identities = 33/93 (35%), Positives = 50/93 (53%)

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
             +D S   +++E+D      R SG GGQ  N T++AV + H PTG +V+C + RSQ  N
Sbjct: 103 HYLDYSNVPKLNEADLEEQFIRGSGPGGQATNKTNNAVLLKHKPTGFIVKCHETRSQWDN 162

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSKTE 305
           K +A  +L  KL  L  ++R   A I    + +
Sbjct: 163 KKRAREILITKLDNLLNKERSIEAQIRALEEKQ 195


>gi|194042870|ref|XP_001928322.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like [Sus scrofa]
          Length = 202

 Score = 43.6 bits (101), Expect = 0.048,   Method: Composition-based stats.
 Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 8/89 (8%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + E +      +  G GGQ  N T + V + HIP+G+VV+C Q RS  +N+  A  +L+ 
Sbjct: 55  LDERELEEQFVKGHGPGGQATNKTSNCVVLRHIPSGIVVKCHQTRSVDQNRKLARRILQE 114

Query: 283 KLYE--------LELQKREEIANIGESSK 303
           K+          +  +KRE      E  K
Sbjct: 115 KVDVFYNGENSPVYKEKREAEKRKQERKK 143


>gi|95930653|ref|ZP_01313387.1| ABC transporter related [Desulfuromonas acetoxidans DSM 684]
 gi|95133305|gb|EAT14970.1| ABC transporter related [Desulfuromonas acetoxidans DSM 684]
          Length = 646

 Score = 43.6 bits (101), Expect = 0.051,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 3/71 (4%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKE 61
           L +QL  L    D + A    + L  +  DP L+Q+  +   L  + +    A+    ++
Sbjct: 576 LEKQLQQLEA--DIETAETHQADLEQQLADPELYQDQAQFSQLSDQHRDQAEALEGMYEQ 633

Query: 62  IQDRLCDNLIL 72
            +    D   L
Sbjct: 634 WEKLQHDLTTL 644


>gi|110224561|emb|CAJ98778.1| peptide release factor protein 2 [Francisella tularensis subsp.
           tularensis]
 gi|110224571|emb|CAJ98783.1| peptide release factor protein 2 [Francisella tularensis subsp.
           tularensis ATCC 6223]
 gi|110224573|emb|CAJ98784.1| peptide release factor protein 2 [Francisella tularensis subsp.
           tularensis]
 gi|110224575|emb|CAJ98785.1| peptide release factor protein 2 [Francisella novicida]
          Length = 101

 Score = 43.6 bits (101), Expect = 0.051,   Method: Composition-based stats.
 Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 2/103 (1%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           D  +W N   A+ L +++  L+N +   + I + L     LLEL  E++           
Sbjct: 1   DGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELGEEDESLMQEIAKDTQ 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
               ++  E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA
Sbjct: 61  NVASEI--EKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWA 101


>gi|110224557|emb|CAJ98776.1| peptide release factor protein 2 [Francisella tularensis subsp.
           mediasiatica]
 gi|110224559|emb|CAJ98777.1| peptide release factor protein 2 [Francisella novicida]
 gi|110224563|emb|CAJ98779.1| peptide release factor protein 2 [Francisella novicida]
 gi|110224587|emb|CAJ98791.1| peptide release factor protein 2 [Francisella tularensis subsp.
           mediasiatica]
          Length = 101

 Score = 43.6 bits (101), Expect = 0.051,   Method: Composition-based stats.
 Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 2/103 (1%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           D  +W N   A+ L +++  L+N +   + I + L     LLELA E++           
Sbjct: 1   DGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELAEEDESLMQEIAKDTQ 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
               ++  E  +F  + SG+ D+N+A+L++ +G+GGTE+QDWA
Sbjct: 61  NVASEI--EKLEFRRMFSGKMDANNAFLDIQSGSGGTEAQDWA 101


>gi|77919634|ref|YP_357449.1| ABC transporter ATPase [Pelobacter carbinolicus DSM 2380]
 gi|77545717|gb|ABA89279.1| ABC-type transport system, ATPase component [Pelobacter
           carbinolicus DSM 2380]
          Length = 642

 Score = 43.3 bits (100), Expect = 0.052,   Method: Composition-based stats.
 Identities = 8/54 (14%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS-FIKEIQDRLCD 68
            +   + L+ L  +  DP L+++   ++ +  E Q L + +    +  +    +
Sbjct: 586 IETGEENLAQLEARLADPGLYEDPERSRQIAAEYQSLQDEVGVLYQRWESLQLE 639


>gi|197927090|ref|NP_001128189.1| probable peptide chain release factor C12orf65 homolog,
           mitochondrial isoform a [Mus musculus]
 gi|81895172|sp|Q80VP5|CL065_MOUSE RecName: Full=Probable peptide chain release factor C12orf65
           homolog, mitochondrial; Flags: Precursor
 gi|28422444|gb|AAH46909.1| RIKEN cDNA 2810006K23 gene [Mus musculus]
 gi|148687649|gb|EDL19596.1| RIKEN cDNA 2810006K23, isoform CRA_b [Mus musculus]
          Length = 184

 Score = 43.3 bits (100), Expect = 0.054,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 44/80 (55%)

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           + S++ V    D    + ++ES+      +  G GGQ  N T + V + H+P+G+VV+C 
Sbjct: 40  AASTVQVAGRKDYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCH 99

Query: 265 QERSQHKNKAQAWNMLRAKL 284
           Q RS  +N+  A  +L+ K+
Sbjct: 100 QTRSVDQNRKIARKVLQEKV 119


>gi|219111103|ref|XP_002177303.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411838|gb|EEC51766.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 491

 Score = 43.3 bits (100), Expect = 0.054,   Method: Composition-based stats.
 Identities = 28/72 (38%), Positives = 36/72 (50%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
                  E++E D      R SG GGQ  N T + V + H PT + V+CQ  RS  +N+ 
Sbjct: 380 YTARELPELNEDDLTETFVRGSGPGGQKTNKTSNKVALLHGPTQLRVECQDTRSLQQNRK 439

Query: 275 QAWNMLRAKLYE 286
            A   LRAKL E
Sbjct: 440 IARKRLRAKLDE 451


>gi|328955493|ref|YP_004372826.1| ABC transporter related protein [Coriobacterium glomerans PW2]
 gi|328455817|gb|AEB07011.1| ABC transporter related protein [Coriobacterium glomerans PW2]
          Length = 675

 Score = 43.3 bits (100), Expect = 0.058,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 23/76 (30%), Gaps = 6/76 (7%)

Query: 2   KLSRQLNCLGGLF-----DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           +L+R+L            D      R   L        L+++ +     + E   L   I
Sbjct: 593 ELNRRLKQRRTRLSTVDADLARKRARYDELMAIMSSEGLYEDQVAFNRALAEYGALKKEI 652

Query: 57  SFI-KEIQDRLCDNLI 71
           S + +E  D       
Sbjct: 653 SVLEEEWLDLSAQLEE 668


>gi|110224725|emb|CAJ98860.1| peptide release factor protein 2 [Francisella philomiragia]
 gi|110224727|emb|CAJ98861.1| peptide release factor protein 2 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 101

 Score = 43.3 bits (100), Expect = 0.058,   Method: Composition-based stats.
 Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 2/103 (1%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           D  +W N   A+ L R++  L+N +   + I + L     LLELA E++           
Sbjct: 1   DGSIWDNPEYAQNLGRQKVELENVVHNCEYISETLETLTELLELAEEDESLMQEIAKDTQ 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
               ++  E  +F  + SG+ D N+A+L++ +G+GGTE+QDWA
Sbjct: 61  DVTAEI--EKLEFRRMFSGQMDPNNAFLDIQSGSGGTEAQDWA 101


>gi|307946753|ref|ZP_07662088.1| GCN20-type ATP-binding cassette protein GCN3 [Roseibium sp.
           TrichSKD4]
 gi|307770417|gb|EFO29643.1| GCN20-type ATP-binding cassette protein GCN3 [Roseibium sp.
           TrichSKD4]
          Length = 637

 Score = 43.3 bits (100), Expect = 0.059,   Method: Composition-based stats.
 Identities = 9/72 (12%), Positives = 26/72 (36%), Gaps = 4/72 (5%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQHLD-NAISFIK 60
           L +++       +     +++  L+    DP  +Q +   A    +ER + +   +   +
Sbjct: 567 LQQKIKAAEK--EMARLQEKIEKLDEALADPAFFQTDPDRAAKFAKERAYCEKKLVKTEE 624

Query: 61  EIQDRLCDNLIL 72
           E  +   +    
Sbjct: 625 EWLELSAEFEEA 636


>gi|171914371|ref|ZP_02929841.1| Class I peptide chain release factor [Verrucomicrobium spinosum DSM
           4136]
          Length = 141

 Score = 43.3 bits (100), Expect = 0.060,   Method: Composition-based stats.
 Identities = 35/91 (38%), Positives = 49/91 (53%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
               +++ I E D      R +GAGGQ +N T S V +TH+PTG+ V+CQ+ERSQ  N+ 
Sbjct: 16  HQRMLKLGIREEDLEETFIRGTGAGGQKINKTSSTVVLTHVPTGLEVRCQRERSQSLNRV 75

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTE 305
            A   L +KL E     + E  N  E  K +
Sbjct: 76  VAREELCSKLEERLAAVKLERRNEVEKKKRQ 106


>gi|315053701|ref|XP_003176225.1| hypothetical protein MGYG_00314 [Arthroderma gypseum CBS 118893]
 gi|311338071|gb|EFQ97273.1| hypothetical protein MGYG_00314 [Arthroderma gypseum CBS 118893]
          Length = 192

 Score = 43.3 bits (100), Expect = 0.060,   Method: Composition-based stats.
 Identities = 30/81 (37%), Positives = 43/81 (53%)

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
                  I +S+      + SG GGQ +N T SAV++ HIPT  VV+CQ  RSQ +N+  
Sbjct: 42  QMPPRPTIDDSEITGTYLKGSGPGGQKINKTSSAVQLIHIPTNTVVKCQATRSQSQNRKI 101

Query: 276 AWNMLRAKLYELELQKREEIA 296
           A  +L  K+  LE  ++   A
Sbjct: 102 AKRILAEKIELLEKGEQSRAA 122


>gi|148264585|ref|YP_001231291.1| class I peptide chain release factor [Geobacter uraniireducens Rf4]
 gi|146398085|gb|ABQ26718.1| Class I peptide chain release factor [Geobacter uraniireducens Rf4]
          Length = 108

 Score = 43.3 bits (100), Expect = 0.061,   Method: Composition-based stats.
 Identities = 40/80 (50%), Positives = 57/80 (71%)

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           + +EI ESD +I+ YRASG GGQH NTTDSAVRI H+PTG+VVQ  + RSQ +N+  A +
Sbjct: 1   MAMEIKESDIKIEFYRASGPGGQHRNTTDSAVRIRHLPTGIVVQASESRSQAQNREVAMH 60

Query: 279 MLRAKLYELELQKREEIANI 298
            L+  L + E + ++ +A+ 
Sbjct: 61  RLQEALLKRERKVKKRVASR 80


>gi|139439680|ref|ZP_01773093.1| Hypothetical protein COLAER_02121 [Collinsella aerofaciens ATCC
           25986]
 gi|133775021|gb|EBA38841.1| Hypothetical protein COLAER_02121 [Collinsella aerofaciens ATCC
           25986]
          Length = 678

 Score = 43.3 bits (100), Expect = 0.063,   Method: Composition-based stats.
 Identities = 9/70 (12%), Positives = 21/70 (30%), Gaps = 6/70 (8%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI----SF 58
           +  QL  +    + D    R   L        L+ +  +    + E   L   +      
Sbjct: 604 VRNQLKKIET--ELDKKRARYDELMELMASEELYADQDKFNAALGEYNGLKQELPKLEDE 661

Query: 59  IKEIQDRLCD 68
             E+  ++ +
Sbjct: 662 WLELSTQIEE 671


>gi|110224567|emb|CAJ98781.1| peptide release factor protein 2 [Francisella tularensis subsp.
           holarctica]
 gi|110224577|emb|CAJ98786.1| peptide release factor protein 2 [Francisella tularensis subsp.
           holarctica]
 gi|110224579|emb|CAJ98787.1| peptide release factor protein 2 [Francisella tularensis subsp.
           holarctica]
 gi|110224581|emb|CAJ98788.1| peptide release factor protein 2 [Francisella tularensis subsp.
           holarctica]
 gi|110224583|emb|CAJ98789.1| peptide release factor protein 2 [Francisella tularensis subsp.
           holarctica]
 gi|110224585|emb|CAJ98790.1| peptide release factor protein 2 [Francisella tularensis subsp.
           holarctica]
          Length = 101

 Score = 43.3 bits (100), Expect = 0.063,   Method: Composition-based stats.
 Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 2/103 (1%)

Query: 32  DPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDN 91
           D  +W N   A+ L +++  L+N +   + I + L     LLEL  E++           
Sbjct: 1   DGSIWDNPEYAQNLGKQKVELENVVHNCEYISETLETLSELLELGEEDESLMQEIAKDTQ 60

Query: 92  LQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
               ++  E  +F  + SG+ D+N A+L++ +G+GGTE+QDWA
Sbjct: 61  NVASEI--EKLEFRRMFSGKMDANKAFLDIQSGSGGTEAQDWA 101


>gi|168701291|ref|ZP_02733568.1| peptide chain release factor 2 [Gemmata obscuriglobus UQM 2246]
          Length = 185

 Score = 43.3 bits (100), Expect = 0.063,   Method: Composition-based stats.
 Identities = 32/68 (47%), Positives = 43/68 (63%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
            +  +     C +DTYRASG GGQ  N T SAVR+ H PTG++V  ++ RSQH+NKA+A 
Sbjct: 18  HLTEDQLLRQCEVDTYRASGPGGQKRNKTSSAVRLRHAPTGLIVIAEESRSQHENKAKAL 77

Query: 278 NMLRAKLY 285
             L   L+
Sbjct: 78  KRLWHALF 85


>gi|121703728|ref|XP_001270128.1| peptidyl-tRNA hydrolase domain protein [Aspergillus clavatus NRRL
           1]
 gi|119398272|gb|EAW08702.1| peptidyl-tRNA hydrolase domain protein [Aspergillus clavatus NRRL
           1]
          Length = 203

 Score = 43.3 bits (100), Expect = 0.067,   Method: Composition-based stats.
 Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 2/91 (2%)

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P       ++I+++D  I   + +G GGQ +N T+SAV++ H PTG+VV+ Q  RS+ +N
Sbjct: 36  PEKQLPPRLKINDADLTISYLKGTGPGGQKINKTNSAVQLIHKPTGLVVKSQATRSRSQN 95

Query: 273 KAQAWNMLRAKLYELELQKREEIANIGESSK 303
           +  A  +L  K+   ELQK +E     ++ +
Sbjct: 96  EKIARQILADKVE--ELQKGDESRRAIKAER 124


>gi|302024126|ref|ZP_07249337.1| peptide chain release factor 2 [Streptococcus suis 05HAS68]
          Length = 50

 Score = 43.3 bits (100), Expect = 0.067,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 20/46 (43%)

Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
            +P  W + + A+   +E   L N      ++ D   ++ ILL+ 
Sbjct: 1  MTEPDFWNDNLAAQKTSQELNELKNTYGNFHQMLDLYDESEILLDF 46


>gi|108758265|ref|YP_629628.1| peptidyl-tRNA hydrolase domain-containing protein [Myxococcus
           xanthus DK 1622]
 gi|108462145|gb|ABF87330.1| peptidyl-tRNA hydrolase domain protein [Myxococcus xanthus DK 1622]
          Length = 129

 Score = 43.3 bits (100), Expect = 0.067,   Method: Composition-based stats.
 Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 23/102 (22%)

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL--- 284
           C +D + ASG GGQH NTT S VR+TH PT + V   + RSQ +NK  A   LR  L   
Sbjct: 30  CEVDYFIASGPGGQHRNTTASGVRLTHAPTELSVSATERRSQVQNKGVALERLREGLKVL 89

Query: 285 ------------------YELELQKREEIANIGESSKTEIGW 308
                               LE +KR        +SK+  GW
Sbjct: 90  TFVPKVRRATKPTAGSKRRRLEGKKRTSEKKALRNSKS--GW 129


>gi|255556733|ref|XP_002519400.1| peptide chain release factor, putative [Ricinus communis]
 gi|223541467|gb|EEF43017.1| peptide chain release factor, putative [Ricinus communis]
          Length = 185

 Score = 42.9 bits (99), Expect = 0.069,   Method: Composition-based stats.
 Identities = 28/49 (57%), Positives = 37/49 (75%)

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
              C +DTY+ASG GGQH N  +SAVRI H+PTG++ Q  ++RSQHKN+
Sbjct: 1   MRQCEMDTYKASGPGGQHRNKRESAVRIKHLPTGIISQAVEDRSQHKNR 49


>gi|307197489|gb|EFN78723.1| Uncharacterized protein C12orf65-like protein [Harpegnathos
           saltator]
          Length = 165

 Score = 42.9 bits (99), Expect = 0.070,   Method: Composition-based stats.
 Identities = 31/92 (33%), Positives = 49/92 (53%)

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
            +D S   ++ E+D +    R SG GGQ  N T++AV + H PTG+VV+C + RS   N+
Sbjct: 49  YLDYSNLPKLEEADLKEQFVRGSGPGGQATNKTNNAVVLKHKPTGIVVKCHETRSLWDNQ 108

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTE 305
            +A  +L  KL  L  ++    A I    + +
Sbjct: 109 KRARELLVTKLDNLLNKEHSIEAQIRAIQQKQ 140


>gi|118792472|ref|XP_320337.3| AGAP012195-PA [Anopheles gambiae str. PEST]
 gi|116116915|gb|EAA00473.4| AGAP012195-PA [Anopheles gambiae str. PEST]
          Length = 151

 Score = 42.9 bits (99), Expect = 0.072,   Method: Composition-based stats.
 Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 9/97 (9%)

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           D S    + + D      R SG GGQ V  T++ V +TH PTG+VVQC   RS  +N+ +
Sbjct: 33  DHSRLPVLRDEDLEESFVRGSGPGGQAVAKTNNKVVLTHKPTGIVVQCHTTRSLFENRRE 92

Query: 276 AWNMLRAKLYEL---------ELQKREEIANIGESSK 303
           A  ML  KL +L         +LQ+ E       + +
Sbjct: 93  ARKMLIGKLDQLYNGDQSVEAQLQRIEAKKQTETARR 129


>gi|150004575|ref|YP_001299319.1| ABC transporter ATP-binding protein [Bacteroides vulgatus ATCC
           8482]
 gi|149932999|gb|ABR39697.1| ABC transporter ATP-binding protein [Bacteroides vulgatus ATCC
           8482]
          Length = 647

 Score = 42.9 bits (99), Expect = 0.076,   Method: Composition-based stats.
 Identities = 8/74 (10%), Positives = 28/74 (37%), Gaps = 5/74 (6%)

Query: 2   KLSRQLNCLGGLF-DWDNAVQRLS----FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           +L++++  L     D +  +++L      +      P    ++   +   + ++ LD  +
Sbjct: 572 ELNKKIRKLEKRIADCEQKIEKLETEIGEVEADMATPEGASDMALYEKHQKLKKDLDQTV 631

Query: 57  SFIKEIQDRLCDNL 70
              + +   L +  
Sbjct: 632 EEWETVSMELEEMQ 645


>gi|294776766|ref|ZP_06742230.1| ABC transporter, ATP-binding protein [Bacteroides vulgatus PC510]
 gi|294449421|gb|EFG17957.1| ABC transporter, ATP-binding protein [Bacteroides vulgatus PC510]
          Length = 647

 Score = 42.9 bits (99), Expect = 0.077,   Method: Composition-based stats.
 Identities = 8/74 (10%), Positives = 28/74 (37%), Gaps = 5/74 (6%)

Query: 2   KLSRQLNCLGGLF-DWDNAVQRLS----FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           +L++++  L     D +  +++L      +      P    ++   +   + ++ LD  +
Sbjct: 572 ELNKKIRKLEKRIADCEQKIEKLETEIGEVEADMATPEGASDMALYEKHQKLKKDLDQTV 631

Query: 57  SFIKEIQDRLCDNL 70
              + +   L +  
Sbjct: 632 EEWETVSMELEEMQ 645


>gi|327309086|ref|XP_003239234.1| peptidyl-tRNA hydrolase [Trichophyton rubrum CBS 118892]
 gi|326459490|gb|EGD84943.1| peptidyl-tRNA hydrolase [Trichophyton rubrum CBS 118892]
          Length = 190

 Score = 42.9 bits (99), Expect = 0.079,   Method: Composition-based stats.
 Identities = 30/81 (37%), Positives = 43/81 (53%)

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
                  I +S+      + SG GGQ +N T SAV++ HIPT  VV+CQ  RSQ +N+  
Sbjct: 42  QMPPRPTIDDSEITGTYLKGSGPGGQKINKTSSAVQLIHIPTNTVVKCQATRSQSQNRKI 101

Query: 276 AWNMLRAKLYELELQKREEIA 296
           A  +L  K+  LE  ++   A
Sbjct: 102 AKRILAEKIELLEKGEQSRAA 122


>gi|196010673|ref|XP_002115201.1| hypothetical protein TRIADDRAFT_28629 [Trichoplax adhaerens]
 gi|190582584|gb|EDV22657.1| hypothetical protein TRIADDRAFT_28629 [Trichoplax adhaerens]
          Length = 125

 Score = 42.9 bits (99), Expect = 0.081,   Method: Composition-based stats.
 Identities = 24/71 (33%), Positives = 39/71 (54%)

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             +   + +I   D      + SG GGQ VN + + V + H PTG+V++C Q RSQ+ N+
Sbjct: 12  YTNYYAQSQIPTKDIEESFVKGSGPGGQKVNKSSNCVILKHKPTGIVIKCHQSRSQYHNR 71

Query: 274 AQAWNMLRAKL 284
             A  +L+ K+
Sbjct: 72  IIARQLLKDKI 82


>gi|145550427|ref|XP_001460892.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124428723|emb|CAK93495.1| unnamed protein product [Paramecium tetraurelia]
          Length = 723

 Score = 42.9 bits (99), Expect = 0.082,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 43/85 (50%)

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
              ++ I +  +      +EI ++D      +  G GGQ +N T + V++TH PTG+ ++
Sbjct: 593 SKFYAFISIKEMKMSRKPVEIHQTDLEWKFIKGGGPGGQAINKTSNCVQLTHTPTGIQIK 652

Query: 263 CQQERSQHKNKAQAWNMLRAKLYEL 287
           CQ+ R    NK  A   L+ KL E 
Sbjct: 653 CQKSRDLETNKNYAIKALKEKLDEQ 677


>gi|118396926|ref|XP_001030799.1| Peptidyl-tRNA hydrolase domain containing protein [Tetrahymena
           thermophila]
 gi|89285114|gb|EAR83136.1| Peptidyl-tRNA hydrolase domain containing protein [Tetrahymena
           thermophila SB210]
          Length = 636

 Score = 42.9 bits (99), Expect = 0.082,   Method: Composition-based stats.
 Identities = 26/75 (34%), Positives = 34/75 (45%)

Query: 213 PVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKN 272
           P   + I+ +I E D      + SG GGQ VN T +   + H PTG+ V+    R   KN
Sbjct: 512 PQKKERIKPQIDEKDLEWKFVKGSGPGGQSVNKTSNNAVLIHKPTGIQVRSHASRELDKN 571

Query: 273 KAQAWNMLRAKLYEL 287
           K      L  KL  L
Sbjct: 572 KQYCMKQLSEKLDVL 586


>gi|115756417|ref|XP_001202254.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
 gi|115938185|ref|XP_798467.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 156

 Score = 42.5 bits (98), Expect = 0.089,   Method: Composition-based stats.
 Identities = 28/100 (28%), Positives = 49/100 (49%)

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R  ++ ++         S   ++ E +      R SG GGQ  N T + V + HIPTG+V
Sbjct: 10  RCKSTTTTRDKLRARIRSKLPDLKEEELEEQFVRGSGPGGQATNKTSNCVVLKHIPTGLV 69

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGE 300
           V+C Q RSQ +N+  A  +++ +L +     +  I+   +
Sbjct: 70  VKCHQTRSQSENQKIARLLMKERLDQHLHADQSAISQYQQ 109


>gi|260785096|ref|XP_002587599.1| hypothetical protein BRAFLDRAFT_95745 [Branchiostoma floridae]
 gi|229272748|gb|EEN43610.1| hypothetical protein BRAFLDRAFT_95745 [Branchiostoma floridae]
          Length = 177

 Score = 42.5 bits (98), Expect = 0.090,   Method: Composition-based stats.
 Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 8/81 (9%)

Query: 232 TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY------ 285
             R  G GGQ  N T++ V + H+PTG+VV+C Q RS  +N+  A   +R KL       
Sbjct: 75  FQRGWGPGGQATNKTNNCVLLKHVPTGIVVKCHQTRSLDENRKIARQHMREKLDLHLKGQ 134

Query: 286 --ELELQKREEIANIGESSKT 304
             EL  +KRE      E  K 
Sbjct: 135 ESELVKEKRELAIKKREKRKK 155


>gi|296121082|ref|YP_003628860.1| class I peptide chain release factor [Planctomyces limnophilus DSM
           3776]
 gi|296013422|gb|ADG66661.1| Class I peptide chain release factor [Planctomyces limnophilus DSM
           3776]
          Length = 203

 Score = 42.5 bits (98), Expect = 0.091,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 3/115 (2%)

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
                D  ++ H S    W +PV+    ++    S+C+    + SG GGQH N  ++ V 
Sbjct: 19  EPVEIDPQTQPHASQIQGWKHPVLLSHEQL---LSECKARRQKTSGPGGQHRNKVETGVF 75

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEI 306
           + H PTGV  Q  + RSQ +N+++A   LR +L      ++  +       K+ +
Sbjct: 76  LKHTPTGVEAQATERRSQAENQSKALKRLRLQLALEIRSQKSALEAPSPLWKSRV 130


>gi|170094760|ref|XP_001878601.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647055|gb|EDR11300.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 294

 Score = 42.5 bits (98), Expect = 0.091,   Method: Composition-based stats.
 Identities = 27/73 (36%), Positives = 36/73 (49%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
                  E+ E D      R SG GGQ +N T++ V++ H PTG+ V CQ  RS   N+ 
Sbjct: 178 HLQRSIPELREEDLEETFVRGSGPGGQSINKTENNVQLLHKPTGLRVSCQDTRSLSLNRK 237

Query: 275 QAWNMLRAKLYEL 287
            A   L  KL +L
Sbjct: 238 LARRWLLEKLDKL 250


>gi|289807125|ref|ZP_06537754.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. AG3]
          Length = 145

 Score = 42.5 bits (98), Expect = 0.091,   Method: Composition-based stats.
 Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 5/107 (4%)

Query: 170 LLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCR 229
           + + G  A  + +   G    +  SPY  +  R   +  I        S +  I   + R
Sbjct: 43  VSLDGEKAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGI-----GRFSADEHIQSDEIR 97

Query: 230 IDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
            +T R+SG GGQHVN TDSAVR TH+ +G+ V+ Q ERSQH NK   
Sbjct: 98  FETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLG 144


>gi|239906239|ref|YP_002952979.1| putative ABC transporter ATP-binding protein [Desulfovibrio
           magneticus RS-1]
 gi|239796104|dbj|BAH75093.1| putative ABC transporter ATP-binding protein [Desulfovibrio
           magneticus RS-1]
          Length = 666

 Score = 42.5 bits (98), Expect = 0.098,   Method: Composition-based stats.
 Identities = 7/61 (11%), Positives = 23/61 (37%), Gaps = 4/61 (6%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL----DNAISFIKEIQDRLCDNL 70
           + +  + + S +     DP  +        L +E   L    ++ ++ +  +++ + D  
Sbjct: 597 ELETLLAKQSEVEAVMADPETYAQRELFSKLSKEYSDLSREAEDLLARMAVMEEEIADLE 656

Query: 71  I 71
            
Sbjct: 657 A 657


>gi|170049046|ref|XP_001853980.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167870988|gb|EDS34371.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 142

 Score = 42.5 bits (98), Expect = 0.099,   Method: Composition-based stats.
 Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 2/85 (2%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
             + + D      R SG GGQ V  T++ V +TH PTG+V+QC   RS  KN+ +A  +L
Sbjct: 31  PVLRDEDLEEAFVRGSGPGGQSVAKTNNKVVLTHKPTGIVIQCHSSRSLFKNREEARRLL 90

Query: 281 RAKLYELE--LQKREEIANIGESSK 303
             KL ELE   Q  E      E+ K
Sbjct: 91  ILKLDELENGDQSVEAQRQKIEAKK 115


>gi|224477038|ref|YP_002634644.1| putative ABC transporter ATP-binding protein [Staphylococcus
           carnosus subsp. carnosus TM300]
 gi|222421645|emb|CAL28459.1| putative ABC transporter ATP-binding protein [Staphylococcus
           carnosus subsp. carnosus TM300]
          Length = 642

 Score = 42.5 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 33/69 (47%), Gaps = 6/69 (8%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQ----HLDNAIS 57
           ++ RQ+       + +   Q+++ +N +   P ++ +  +A  L  E+      L+  + 
Sbjct: 575 QIERQIENCEA--EIEACEQKIADINEQLTQPEIFSDPEKAGELADEKNNTEQQLEQIMI 632

Query: 58  FIKEIQDRL 66
             +E+Q+++
Sbjct: 633 RWEELQEKI 641


>gi|148266078|ref|YP_001232784.1| class I peptide chain release factor [Geobacter uraniireducens Rf4]
 gi|146399578|gb|ABQ28211.1| Class I peptide chain release factor [Geobacter uraniireducens Rf4]
          Length = 127

 Score = 42.5 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 27/74 (36%), Positives = 37/74 (50%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
                 + + E D      R+SG GGQHVN T + V + H PTG+ V+C +ERSQ  N+ 
Sbjct: 15  RQKMESLGVREEDIDEQFIRSSGKGGQHVNKTSTCVYLKHKPTGIEVKCMRERSQSLNRF 74

Query: 275 QAWNMLRAKLYELE 288
            A   L  K+    
Sbjct: 75  LARRELLEKIEARA 88


>gi|317405183|gb|EFV85524.1| ABC transporter ATP-binding protein [Achromobacter xylosoxidans
           C54]
          Length = 644

 Score = 42.5 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 30/84 (35%), Gaps = 15/84 (17%)

Query: 2   KLSRQLNCLGGLFD---------WDNAVQRLSFLNTKTEDPHLWQNVIEA--KMLMRER- 49
           +  ++L+ L    +          +    +L  L+    DP L+ +   A  + +M E  
Sbjct: 557 EQRQRLSALRKPLEAKLAKVEAEMEKLRAKLQALDAVIADPDLYSDARRAERQKVMAEHG 616

Query: 50  ---QHLDNAISFIKEIQDRLCDNL 70
              + ++       E+Q  L +  
Sbjct: 617 EHGKRMETLEEQWLELQGSLEEIE 640


>gi|254883053|ref|ZP_05255763.1| ABC transporter ATP-binding protein [Bacteroides sp. 4_3_47FAA]
 gi|319643572|ref|ZP_07998192.1| ABC transporter ATP-binding protein [Bacteroides sp. 3_1_40A]
 gi|254835846|gb|EET16155.1| ABC transporter ATP-binding protein [Bacteroides sp. 4_3_47FAA]
 gi|317384741|gb|EFV65700.1| ABC transporter ATP-binding protein [Bacteroides sp. 3_1_40A]
          Length = 647

 Score = 42.5 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 8/74 (10%), Positives = 28/74 (37%), Gaps = 5/74 (6%)

Query: 2   KLSRQLNCLGGLF-DWDNAVQRLS----FLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           +L++++  L     D +  +++L      +      P    ++   +   + ++ LD  +
Sbjct: 572 ELNKKIRKLEKRVADCEQKIEKLETEIGEVEADMATPEGASDMALYEKHQKLKKDLDQTV 631

Query: 57  SFIKEIQDRLCDNL 70
              + +   L +  
Sbjct: 632 EEWETVSMELEEMQ 645


>gi|319941613|ref|ZP_08015937.1| hypothetical protein HMPREF9464_01156 [Sutterella wadsworthensis
           3_1_45B]
 gi|319804843|gb|EFW01697.1| hypothetical protein HMPREF9464_01156 [Sutterella wadsworthensis
           3_1_45B]
          Length = 646

 Score = 42.5 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 30/73 (41%), Gaps = 4/73 (5%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ--NVIEAKMLMRERQHLDNAISFIK 60
           L ++L  +    + +   ++L  L+T+  DP  +   +  +    +RE   L   +  ++
Sbjct: 570 LKKELEKVER--EMNALSEKLKALDTQLADPAFYNGADQGKVAQTLREHGELAPKVEALE 627

Query: 61  EIQDRLCDNLILL 73
                L + +  L
Sbjct: 628 MHWLELSEKIEAL 640


>gi|242781170|ref|XP_002479747.1| peptidyl-tRNA hydrolase domain protein [Talaromyces stipitatus ATCC
           10500]
 gi|218719894|gb|EED19313.1| peptidyl-tRNA hydrolase domain protein [Talaromyces stipitatus ATCC
           10500]
          Length = 174

 Score = 42.5 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 1/94 (1%)

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
                 ++ + D      + +G GGQ +N T+SAV++ H PTG+VV+ Q  RS+ +N+  
Sbjct: 36  QLPPRPKLDDKDITGSYLKGTGPGGQKINKTNSAVQLIHKPTGIVVKSQATRSRSQNQKI 95

Query: 276 AWNMLRAKLYELEL-QKREEIANIGESSKTEIGW 308
           A  +L AK+ ELE  ++  E        K +   
Sbjct: 96  AREILAAKVEELEKGEQSREAIKNALKRKRKASS 129


>gi|157131147|ref|XP_001662139.1| hypothetical protein AaeL_AAEL012009 [Aedes aegypti]
 gi|157137107|ref|XP_001663890.1| hypothetical protein AaeL_AAEL013711 [Aedes aegypti]
 gi|108869799|gb|EAT34024.1| conserved hypothetical protein [Aedes aegypti]
 gi|108871632|gb|EAT35857.1| conserved hypothetical protein [Aedes aegypti]
          Length = 142

 Score = 42.5 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/85 (36%), Positives = 44/85 (51%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
             + + D      R SG GGQ V  T++ V +TH PTG+V+QC   RS  KN+ +A  +L
Sbjct: 31  PALRDDDLEETFVRGSGPGGQAVAKTNNKVVLTHKPTGIVIQCHSSRSLFKNREEARRLL 90

Query: 281 RAKLYELELQKREEIANIGESSKTE 305
            AKL ELE   +   A      + +
Sbjct: 91  VAKLDELENGDQSVEAQQRRIDQKK 115


>gi|169854029|ref|XP_001833692.1| hypothetical protein CC1G_03909 [Coprinopsis cinerea okayama7#130]
 gi|116505342|gb|EAU88237.1| hypothetical protein CC1G_03909 [Coprinopsis cinerea okayama7#130]
          Length = 264

 Score = 42.5 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/74 (37%), Positives = 39/74 (52%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
               I  E+ E D      R SG GGQ +N T++ V++ H PTG+ V CQ+ RS  +N+ 
Sbjct: 150 HTQRIVPELKEEDLEESFVRGSGPGGQSINKTENNVQLLHKPTGIRVSCQETRSLSQNRK 209

Query: 275 QAWNMLRAKLYELE 288
            A   L  KL +L 
Sbjct: 210 IARKRLLEKLDKLA 223


>gi|187607772|ref|NP_001119948.1| hypothetical protein LOC100004874 [Danio rerio]
 gi|162416112|sp|A5WUX7|CL065_DANRE RecName: Full=Probable peptide chain release factor C12orf65
           homolog, mitochondrial; Flags: Precursor
 gi|148726035|emb|CAN87842.1| novel protein [Danio rerio]
          Length = 156

 Score = 42.1 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 9/109 (8%)

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
             S +             + E +      R SG GGQ  N T + V + HIP+G+VV+C 
Sbjct: 24  WPSVLPAAGKKYQIELPVVHEEELEEQFVRGSGPGGQATNKTSNCVVLRHIPSGIVVKCH 83

Query: 265 QERSQHKNKAQAWNMLRAKL---------YELELQKREEIANIGESSKT 304
           + RS   N+ +A  +LR KL           L+++K        +  K 
Sbjct: 84  ETRSVDLNRKRAREILREKLEVAYKGEESELLKMKKESMQKKQDKRRKV 132


>gi|222053782|ref|YP_002536144.1| Class I peptide chain release factor [Geobacter sp. FRC-32]
 gi|221563071|gb|ACM19043.1| Class I peptide chain release factor [Geobacter sp. FRC-32]
          Length = 139

 Score = 42.1 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 27/70 (38%), Positives = 36/70 (51%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
                 + + E D      R+SG GGQHVN T + V + H PTG+ V+C  ERSQ  N+ 
Sbjct: 15  RQKMDLLGVREEDLDEQFIRSSGKGGQHVNKTSTCVYLRHRPTGIEVKCMAERSQSLNRF 74

Query: 275 QAWNMLRAKL 284
            A   L  K+
Sbjct: 75  LARRQLLEKI 84


>gi|207110569|ref|ZP_03244731.1| peptide chain release factor 1 [Helicobacter pylori
          HPKX_438_CA4C1]
          Length = 54

 Score = 42.1 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 6/47 (12%), Positives = 17/47 (36%)

Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
            + ++R   L        +  ++ +   L +E+  ++      KE 
Sbjct: 8  LSSILKRYDELTALLSSAEVISDIKKLTELSKEQSSIEEISIASKEY 54


>gi|189519733|ref|XP_001340041.2| PREDICTED: probable peptide chain release factor C12orf65 homolog,
           mitochondrial [Danio rerio]
          Length = 156

 Score = 42.1 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 9/109 (8%)

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
             S +             + E +      R SG GGQ  N T + V + HIP+G+VV+C 
Sbjct: 24  WPSVLPAAGKKYQIELPVVHEEELEEQFVRGSGPGGQATNKTSNCVVLRHIPSGIVVKCH 83

Query: 265 QERSQHKNKAQAWNMLRAKL---------YELELQKREEIANIGESSKT 304
           + RS   N+ +A  +LR KL           L+++K        +  K 
Sbjct: 84  ETRSVDLNRKRAREILREKLEVAYKGEESELLKMKKESMQKKQDKRRKV 132


>gi|149197233|ref|ZP_01874285.1| putative peptide chain release factor 2 [Lentisphaera araneosa
           HTCC2155]
 gi|149139779|gb|EDM28180.1| putative peptide chain release factor 2 [Lentisphaera araneosa
           HTCC2155]
          Length = 125

 Score = 42.1 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 36/79 (45%), Positives = 51/79 (64%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            +C+   +RASGAGGQHVNTTDSAVR+ H PTG+VVQ  + RSQH+N+      LR  L 
Sbjct: 23  RECQFSAFRASGAGGQHVNTTDSAVRLVHFPTGLVVQSSESRSQHRNREICLKKLRQSLV 82

Query: 286 ELELQKREEIANIGESSKT 304
               ++++ +A   + S +
Sbjct: 83  MAGRKRKKRVATRKKRSVS 101


>gi|207111372|ref|ZP_03245534.1| peptide chain release factor 1 [Helicobacter pylori HPKX_438_CA4C1]
          Length = 51

 Score = 42.1 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 6/53 (11%)

Query: 278 NMLRAKLYELELQKREEIANIGESSKTEIGWG---RQIRSYVLQPYQMVKDLR 327
            +L+A+LYE ++++++      +  K ++G G    +IR+Y   P   + + R
Sbjct: 2   KILKARLYEKQIEEQQ--LANAKDRKEQVGSGDRSERIRTYNY-PQNRLSEHR 51


>gi|78222830|ref|YP_384577.1| class I peptide chain release factor [Geobacter metallireducens
           GS-15]
 gi|78194085|gb|ABB31852.1| Class I peptide chain release factor [Geobacter metallireducens
           GS-15]
          Length = 107

 Score = 42.1 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 35/65 (53%), Positives = 44/65 (67%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
            IEI+E+D + + YR SG GGQH N T+S VRI H+PTGVVVQ  + RSQ +N+  A   
Sbjct: 1   MIEINEADLKFEFYRGSGPGGQHRNVTESGVRIRHVPTGVVVQACESRSQARNREIALER 60

Query: 280 LRAKL 284
           LR  L
Sbjct: 61  LRQIL 65


>gi|295702444|ref|YP_003595519.1| putative ABC transporter ATP-binding protein [Bacillus megaterium
           DSM 319]
 gi|294800103|gb|ADF37169.1| putative ABC transporter, ATP-binding protein [Bacillus megaterium
           DSM 319]
          Length = 644

 Score = 42.1 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 17/38 (44%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53
                + L  L TK  DP ++ + ++ + L +E   L 
Sbjct: 94  LKKMEKELRTLETKMGDPDIFNDSVQYEKLTKEYDQLQ 131


>gi|197120075|ref|YP_002140502.1| peptidyl-tRNA hydrolase-like protein [Geobacter bemidjiensis Bem]
 gi|197089435|gb|ACH40706.1| peptidyl-tRNA hydrolase-related protein [Geobacter bemidjiensis
           Bem]
          Length = 132

 Score = 42.1 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/69 (40%), Positives = 38/69 (55%)

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
              E+ +SE         ASG GGQHVN + S V + H+PTGV V+C + RSQ  N+  A
Sbjct: 17  KMEELGVSEQQIEERFVHASGRGGQHVNKSSSCVYLKHLPTGVEVKCMESRSQSLNRFLA 76

Query: 277 WNMLRAKLY 285
             +L  K+ 
Sbjct: 77  RRLLLEKIA 85


>gi|294497079|ref|YP_003560779.1| putative ABC transporter ATP-binding protein [Bacillus megaterium
           QM B1551]
 gi|294347016|gb|ADE67345.1| putative ABC transporter, ATP-binding protein [Bacillus megaterium
           QM B1551]
          Length = 644

 Score = 42.1 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 17/38 (44%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53
                + L  L TK  DP ++ + ++ + L +E   L 
Sbjct: 94  LKKMEKELRTLETKMGDPDIFNDSVQYEKLTKEYDQLQ 131


>gi|242223756|ref|XP_002477455.1| predicted protein [Postia placenta Mad-698-R]
 gi|220722947|gb|EED77345.1| predicted protein [Postia placenta Mad-698-R]
          Length = 275

 Score = 42.1 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 3/90 (3%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
               +  E+ E D      R SG GGQ +N T++ V++ H PTG+ V CQ+ RS  +N+ 
Sbjct: 159 HKQRVVPELKEEDLEEAFVRGSGPGGQSINKTENNVQLLHKPTGLRVSCQETRSLSQNRK 218

Query: 275 QAWNMLRAKLYELE---LQKREEIANIGES 301
            A  +L  KL  L    L K+E    + + 
Sbjct: 219 LARRILLGKLDALYNPGLSKQEVKKALQQE 248


>gi|227486228|ref|ZP_03916544.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Anaerococcus lactolyticus ATCC 51172]
 gi|227235859|gb|EEI85874.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Anaerococcus lactolyticus ATCC 51172]
          Length = 640

 Score = 42.1 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 6/70 (8%), Positives = 26/70 (37%), Gaps = 3/70 (4%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-KE 61
           +  ++  +    D +   +++  L  ++     + +      + RE + L++    + +E
Sbjct: 573 IKNKIKSIEK--DMEEIDKKIKDLTKESLAEGFYDDQARVAEVFREMKDLEDMRDDLDEE 630

Query: 62  IQDRLCDNLI 71
             +   +   
Sbjct: 631 WLNLNMELEE 640


>gi|298249625|ref|ZP_06973429.1| Class I peptide chain release factor [Ktedonobacter racemifer DSM
           44963]
 gi|297547629|gb|EFH81496.1| Class I peptide chain release factor [Ktedonobacter racemifer DSM
           44963]
          Length = 118

 Score = 42.1 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/72 (38%), Positives = 42/72 (58%)

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
             I+ +  E DC I+ + A G GGQH N  +S VR+ H P+G VV   + RSQ+ N+  A
Sbjct: 6   YPIDRDSLERDCTIEFFIAGGPGGQHRNKVESGVRLIHRPSGQVVTATERRSQYANREMA 65

Query: 277 WNMLRAKLYELE 288
           +  + A+L  L+
Sbjct: 66  FERMAARLERLQ 77


>gi|307170845|gb|EFN62956.1| Uncharacterized protein C12orf65-like protein [Camponotus
           floridanus]
          Length = 138

 Score = 42.1 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 32/92 (34%), Positives = 48/92 (52%)

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
            +D S   ++ E+D      R SG GGQ  N T++AV + H PTG+VV+C + RS   NK
Sbjct: 22  HLDYSKVPKLDEADLEEKFIRGSGPGGQATNKTNNAVSLKHKPTGLVVKCHETRSLWDNK 81

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTE 305
            +A  ++  KL  L  ++    A I    K +
Sbjct: 82  KRAREIMITKLDNLLNKEYSIEAQIRGLEKKQ 113


>gi|328544007|ref|YP_004304116.1| ABC transporter nucleotide binding/ATPase protein [polymorphum
           gilvum SL003B-26A1]
 gi|326413751|gb|ADZ70814.1| ABC transporter, nucleotide binding/ATPase protein [Polymorphum
           gilvum SL003B-26A1]
          Length = 623

 Score = 42.1 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 9/72 (12%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLW-QNVIEAKMLMRERQHLDNAI-SFIK 60
           L +++       +      ++  L+    DP  + ++   A    RER  ++  + +  +
Sbjct: 554 LRKKIEAAEK--EMARLQDKIVMLDQTMADPDFFLRDPERAAKFARERAFIEKKLAATEE 611

Query: 61  EIQDRLCDNLIL 72
           E      +    
Sbjct: 612 EWLQLAAELEEA 623


>gi|282890772|ref|ZP_06299292.1| hypothetical protein pah_c026o105 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499365|gb|EFB41664.1| hypothetical protein pah_c026o105 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 118

 Score = 42.1 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 33/66 (50%), Positives = 44/66 (66%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            +C +  +RA G+GGQHVN TDSAVR+TH PTG+V+ CQ  RSQH NK +    LR ++ 
Sbjct: 15  KECTMTAFRARGSGGQHVNVTDSAVRLTHNPTGIVITCQVHRSQHLNKKECLVKLREEVE 74

Query: 286 ELELQK 291
               +K
Sbjct: 75  RRNYRK 80


>gi|284802519|ref|YP_003414384.1| hypothetical protein LM5578_2275 [Listeria monocytogenes 08-5578]
 gi|284995661|ref|YP_003417429.1| hypothetical protein LM5923_2226 [Listeria monocytogenes 08-5923]
 gi|284058081|gb|ADB69022.1| hypothetical protein LM5578_2275 [Listeria monocytogenes 08-5578]
 gi|284061128|gb|ADB72067.1| hypothetical protein LM5923_2226 [Listeria monocytogenes 08-5923]
          Length = 650

 Score = 41.7 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 9/70 (12%), Positives = 30/70 (42%), Gaps = 6/70 (8%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFI 59
            R+L  +      +   ++++ L  +  +P ++Q+  +A  + +E    +   +  +   
Sbjct: 583 KRKLEEIEKSM--EETDEKIAELELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEW 640

Query: 60  KEIQDRLCDN 69
           ++I + L   
Sbjct: 641 EQISEELESI 650


>gi|16804112|ref|NP_465597.1| hypothetical protein lmo2073 [Listeria monocytogenes EGD-e]
 gi|224501129|ref|ZP_03669436.1| hypothetical protein LmonFR_01170 [Listeria monocytogenes FSL
           R2-561]
 gi|254827039|ref|ZP_05231726.1| ABC transporter [Listeria monocytogenes FSL N3-165]
 gi|16411543|emb|CAD00151.1| lmo2073 [Listeria monocytogenes EGD-e]
 gi|258599421|gb|EEW12746.1| ABC transporter [Listeria monocytogenes FSL N3-165]
          Length = 650

 Score = 41.7 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 9/70 (12%), Positives = 30/70 (42%), Gaps = 6/70 (8%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFI 59
            R+L  +      +   ++++ L  +  +P ++Q+  +A  + +E    +   +  +   
Sbjct: 583 KRKLEEIEKSM--EETDEKIAELELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEW 640

Query: 60  KEIQDRLCDN 69
           ++I + L   
Sbjct: 641 EQISEELESI 650


>gi|253702397|ref|YP_003023586.1| class I peptide chain release factor [Geobacter sp. M21]
 gi|251777247|gb|ACT19828.1| Class I peptide chain release factor [Geobacter sp. M21]
          Length = 132

 Score = 41.7 bits (96), Expect = 0.15,   Method: Composition-based stats.
 Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 4/99 (4%)

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
              E+ +SE         ASG GGQHVN + S V + H+PTGV V+C + RSQ  N+  A
Sbjct: 17  KMEELGVSEQQIEERFVHASGRGGQHVNKSSSCVYLKHLPTGVEVKCMESRSQSLNRFLA 76

Query: 277 WNMLRAKLYE----LELQKREEIANIGESSKTEIGWGRQ 311
             +L  K+      L  +++       + ++ +   G +
Sbjct: 77  RRLLLEKITAAGGGLTKKEQAAEKLKRQKARRKKRSGAK 115


>gi|332982851|ref|YP_004464292.1| ABC transporter-like protein [Mahella australiensis 50-1 BON]
 gi|332700529|gb|AEE97470.1| ABC transporter related protein [Mahella australiensis 50-1 BON]
          Length = 617

 Score = 41.7 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 7/49 (14%), Positives = 18/49 (36%), Gaps = 1/49 (2%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKEI 62
           +      R++ L     DP ++ +  + + L  E   L   +    ++ 
Sbjct: 568 EIVTIEDRIAELEAAMCDPDVYTDGQKMRQLTDEHAKLKTELEELYEKW 616


>gi|297693336|ref|XP_002823974.1| PREDICTED: uncharacterized protein C12orf65-like isoform 1 [Pongo
           abelii]
 gi|297693338|ref|XP_002823975.1| PREDICTED: uncharacterized protein C12orf65-like isoform 2 [Pongo
           abelii]
 gi|297693340|ref|XP_002823976.1| PREDICTED: uncharacterized protein C12orf65-like isoform 3 [Pongo
           abelii]
 gi|297693342|ref|XP_002823977.1| PREDICTED: uncharacterized protein C12orf65-like isoform 4 [Pongo
           abelii]
 gi|297693344|ref|XP_002823978.1| PREDICTED: uncharacterized protein C12orf65-like isoform 5 [Pongo
           abelii]
          Length = 166

 Score = 41.7 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 40/76 (52%)

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + +    D    + + E++      +  G GGQ  N T + V + HIP+G+VV+C Q RS
Sbjct: 41  VQMAGKKDYPALLYLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRS 100

Query: 269 QHKNKAQAWNMLRAKL 284
             +N+  A  +L+ K+
Sbjct: 101 VDQNRKLARKILQEKV 116


>gi|182414215|ref|YP_001819281.1| class I peptide chain release factor [Opitutus terrae PB90-1]
 gi|177841429|gb|ACB75681.1| Class I peptide chain release factor [Opitutus terrae PB90-1]
          Length = 131

 Score = 41.7 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 30/75 (40%), Positives = 38/75 (50%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           +   +      R SG GGQ +N T S V + H PTGV V+CQ ERSQ  N+  AW  L  
Sbjct: 16  VRVEEVDERFVRGSGPGGQKINKTSSTVWLRHGPTGVEVRCQAERSQAANREVAWWELCE 75

Query: 283 KLYELELQKREEIAN 297
           KL     ++RE    
Sbjct: 76  KLEARVRREREASLQ 90


>gi|320587327|gb|EFW99807.1| peptidyl-tRNA hydrolase domain containing protein [Grosmannia
           clavigera kw1407]
          Length = 149

 Score = 41.7 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 2/82 (2%)

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           E +      + +G GGQ +N T+SAV++ H PTG+VV+ Q  RS+ +N+  A  +L A+L
Sbjct: 52  EDEIEEMFVKGTGPGGQKINKTNSAVQLIHRPTGIVVKSQATRSRSQNRTIARQVLAARL 111

Query: 285 YELE--LQKREEIANIGESSKT 304
            EL    Q R  I    +  K 
Sbjct: 112 DELHNGSQSRTAIVADSKRRKK 133


>gi|154757477|gb|AAI51776.1| C17H12ORF65 protein [Bos taurus]
          Length = 143

 Score = 41.7 bits (96), Expect = 0.16,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 8/81 (9%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + E +      +  G GGQ  N T + V + H+P+G+VV+C Q RS  +N+  A  +L+ 
Sbjct: 55  LDERELEEQFVKGHGPGGQATNKTSNCVVLRHVPSGIVVKCHQTRSVDQNRKLARRILQE 114

Query: 283 KLYELE--------LQKREEI 295
           K+             +KRE  
Sbjct: 115 KVDVFYNGENSLVCREKREAE 135


>gi|311107251|ref|YP_003980104.1| ABC transporter [Achromobacter xylosoxidans A8]
 gi|310761940|gb|ADP17389.1| ABC transporter family protein 64 [Achromobacter xylosoxidans A8]
          Length = 638

 Score = 41.7 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 28/74 (37%), Gaps = 8/74 (10%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEA--KMLMRER----QHLDNAI 56
           L  +L  +    + +    +L  L+    DP L+ +   A  + +M E     + +D   
Sbjct: 563 LESKLAKIET--EMEKLRAKLHALDAVIADPDLYSDARRAERQKVMAEHGEHGKRMDELE 620

Query: 57  SFIKEIQDRLCDNL 70
               EIQ  L +  
Sbjct: 621 EQWLEIQGSLEEIE 634


>gi|296213216|ref|XP_002753183.1| PREDICTED: uncharacterized protein C12orf65-like [Callithrix
           jacchus]
          Length = 170

 Score = 41.7 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 40/76 (52%)

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + +    D    + + E++      +  G GGQ  N T + V + HIP+G+VV+C Q RS
Sbjct: 41  VQIAGKKDYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRS 100

Query: 269 QHKNKAQAWNMLRAKL 284
             +N+  A  +L+ K+
Sbjct: 101 VDQNRKLARKILQEKV 116


>gi|213583737|ref|ZP_03365563.1| peptide chain release factor-like protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-0664]
          Length = 147

 Score = 41.7 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 44/151 (29%), Positives = 66/151 (43%), Gaps = 6/151 (3%)

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHD-GEEAGIKSATLLIKGP 175
             L++ +  G  E        L   T+ A + K     LE         ++SA + + G 
Sbjct: 2   ILLQLSSAQGPDECCLAVKKALDCLTKEAAREKVSLTRLETEPGRLPDTLRSALVSLDGE 61

Query: 176 NAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRA 235
            A  + +   G    +  SPY  +  R   +  I        S +  I   + R +T R+
Sbjct: 62  KAMAFSERWCGTLLWICTSPYRPHHGRKNWYVGI-----GRFSADEHIQSDEIRFETLRS 116

Query: 236 SGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
           SG GGQHVN TDSAVR TH+ +G+ V+ Q E
Sbjct: 117 SGPGGQHVNKTDSAVRATHLASGISVKVQSE 147


>gi|303232237|ref|ZP_07318936.1| ABC transporter, ATP-binding protein [Atopobium vaginae PB189-T1-4]
 gi|302481647|gb|EFL44708.1| ABC transporter, ATP-binding protein [Atopobium vaginae PB189-T1-4]
          Length = 699

 Score = 41.7 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 20/51 (39%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
            R + L  K  D  L+ +      +M E   L   +S ++E    L D + 
Sbjct: 646 ARKAELEEKLADSDLYNDKAAFGDVMSEYNALVEKVSALEEEWLELSDVVD 696


>gi|256085783|ref|XP_002579092.1| hypothetical protein [Schistosoma mansoni]
 gi|238664498|emb|CAZ35331.1| conserved hypothetical protein [Schistosoma mansoni]
          Length = 155

 Score = 41.7 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 5/108 (4%)

Query: 201 RRHTSFSSIWVYPVV-----DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHI 255
           R  +  +   + P           +   +E D        SG GGQ +N T + V + HI
Sbjct: 3   RICSWLAKCSLSPHHFSLRFHSKNQWLFNECDLSEMAVLGSGPGGQSINKTANCVVLKHI 62

Query: 256 PTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           PTG+VV+CQ  R   +N+  A   L  KL      +   I  +    K
Sbjct: 63  PTGIVVKCQDSRELERNRILARQRLNDKLDVHFNGENSRIEQLRHREK 110


>gi|73995153|ref|XP_543374.2| PREDICTED: similar to CG30100-PA [Canis familiaris]
          Length = 440

 Score = 41.7 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 40/82 (48%)

Query: 203 HTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQ 262
             + + +      D      + ES+      +  G GGQ  N T + V + HIP+G+VV+
Sbjct: 309 RVAVTLVQAAGKKDRPALPLLDESELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVK 368

Query: 263 CQQERSQHKNKAQAWNMLRAKL 284
           C Q RS  +N+  A  +L+ K+
Sbjct: 369 CHQTRSVDQNRKLARQILQEKV 390


>gi|37523609|ref|NP_926986.1| hypothetical protein glr4040 [Gloeobacter violaceus PCC 7421]
 gi|35214614|dbj|BAC91981.1| glr4040 [Gloeobacter violaceus PCC 7421]
          Length = 125

 Score = 41.7 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 32/65 (49%), Positives = 44/65 (67%)

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           E DC ++   ASG GGQH N T+S VR+TH P+GVVV   + RSQH+N+  A+  + AKL
Sbjct: 22  ERDCTLEFVIASGPGGQHRNKTESGVRLTHRPSGVVVSATERRSQHQNREVAFERMAAKL 81

Query: 285 YELEL 289
            +L+ 
Sbjct: 82  ADLQR 86


>gi|270013378|gb|EFA09826.1| hypothetical protein TcasGA2_TC011973 [Tribolium castaneum]
          Length = 179

 Score = 41.7 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 34/103 (33%), Positives = 50/103 (48%)

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           R     SI  +  +D S   ++ ES+      R SG GGQ  N T + V + H+PTG+VV
Sbjct: 51  RTRLIFSIVRFKHIDYSRVPQLVESELEEQHVRGSGPGGQATNKTSNCVVLKHVPTGLVV 110

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           +C + RS  +N+ +A   L  KL  L    +   A + E  K 
Sbjct: 111 KCHETRSLDQNRKKARQYLVTKLDNLLNGDQSVEAQMREIEKK 153


>gi|56962646|ref|YP_174372.1| ABC transporter ATP-binding protein [Bacillus clausii KSM-K16]
 gi|56908884|dbj|BAD63411.1| ABC transporter ATP-binding protein [Bacillus clausii KSM-K16]
          Length = 637

 Score = 41.3 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 8/63 (12%), Positives = 26/63 (41%), Gaps = 6/63 (9%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER----QHLDNAISFI 59
            R++  +    + +     +S L+ +  DP ++ +  +A+ +  E       L+  +   
Sbjct: 575 QRRIEAIET--ELEQIEASISALHEQLADPDVYTDHQKAQTIQAELEQQNNALEALMEEW 632

Query: 60  KEI 62
           + +
Sbjct: 633 ETL 635


>gi|300361281|ref|ZP_07057458.1| peptide chain release factor [Lactobacillus gasseri JV-V03]
 gi|300353900|gb|EFJ69771.1| peptide chain release factor [Lactobacillus gasseri JV-V03]
          Length = 53

 Score = 41.3 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 22/50 (44%)

Query: 30 TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
            +P  W +  +A+ L+ E   +       K+++++  D    LEL   +
Sbjct: 1  MAEPGFWDDQEQAQSLINETNRMKEKSENFKQLEEKFEDAQTALELLKTD 50


>gi|210634150|ref|ZP_03298012.1| hypothetical protein COLSTE_01933 [Collinsella stercoris DSM 13279]
 gi|210158897|gb|EEA89868.1| hypothetical protein COLSTE_01933 [Collinsella stercoris DSM 13279]
          Length = 126

 Score = 41.3 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 31/82 (37%), Positives = 51/82 (62%), Gaps = 4/82 (4%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            +C +  +RASG GGQ VNTTDSAVR+ H+P+G+VV  ++ RSQ +N+A     L+A+L 
Sbjct: 24  RECEVQVFRASGPGGQGVNTTDSAVRMRHVPSGIVVTARESRSQFQNRASCLRKLKAELE 83

Query: 286 EL----ELQKREEIANIGESSK 303
                 + +K  + +   ++ +
Sbjct: 84  RRARPPKQRKPTKPSKAAKARR 105


>gi|238494178|ref|XP_002378325.1| peptidyl-tRNA hydrolase domain protein [Aspergillus flavus
           NRRL3357]
 gi|317148917|ref|XP_003190253.1| peptidyl-tRNA hydrolase domain protein [Aspergillus oryzae RIB40]
 gi|220694975|gb|EED51318.1| peptidyl-tRNA hydrolase domain protein [Aspergillus flavus
           NRRL3357]
          Length = 176

 Score = 41.3 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 55/110 (50%), Gaps = 3/110 (2%)

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
                 +      ++  +         +++ ++D  I   + +G GGQ +N T+SAV++ 
Sbjct: 13  PYTQPIASLRCFTTTFHLT-NKPLPPRLKLHDADLTISYLKGTGPGGQKINKTNSAVQLI 71

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
           H PTG+VV+ Q  RS+ +N+  A  +L  K+ +LE  K ++     ++ +
Sbjct: 72  HKPTGLVVKSQATRSRSQNEKIARQLLADKVEQLE--KGDQSRAAIKADR 119


>gi|332254315|ref|XP_003276272.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like isoform 1 [Nomascus leucogenys]
 gi|332254317|ref|XP_003276273.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like isoform 2 [Nomascus leucogenys]
 gi|332254319|ref|XP_003276274.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like isoform 3 [Nomascus leucogenys]
 gi|332254321|ref|XP_003276275.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like isoform 4 [Nomascus leucogenys]
          Length = 166

 Score = 41.3 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 40/76 (52%)

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + +    D    + + E++      +  G GGQ  N T + V + HIP+G+VV+C Q RS
Sbjct: 41  VQMAGKKDYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRS 100

Query: 269 QHKNKAQAWNMLRAKL 284
             +N+  A  +L+ K+
Sbjct: 101 VDQNRKLARKILQEKV 116


>gi|22748627|ref|NP_689482.1| probable peptide chain release factor C12orf65, mitochondrial [Homo
           sapiens]
 gi|219879802|ref|NP_001137377.1| probable peptide chain release factor C12orf65, mitochondrial [Homo
           sapiens]
 gi|303304971|ref|NP_001181924.1| probable peptide chain release factor C12orf65, mitochondrial [Homo
           sapiens]
 gi|74733574|sp|Q9H3J6|CL065_HUMAN RecName: Full=Probable peptide chain release factor C12orf65,
           mitochondrial; Flags: Precursor
 gi|12002002|gb|AAG43144.1|AF061733_1 My030 protein [Homo sapiens]
 gi|17390320|gb|AAH18145.1| Chromosome 12 open reading frame 65 [Homo sapiens]
 gi|21755354|dbj|BAC04665.1| unnamed protein product [Homo sapiens]
 gi|38382804|gb|AAH62329.1| Chromosome 12 open reading frame 65 [Homo sapiens]
 gi|119618802|gb|EAW98396.1| hypothetical protein FLJ38663, isoform CRA_b [Homo sapiens]
 gi|312152346|gb|ADQ32685.1| chromosome 12 open reading frame 65 [synthetic construct]
          Length = 166

 Score = 41.3 bits (95), Expect = 0.20,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 40/76 (52%)

Query: 209 IWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERS 268
           + +    D    + + E++      +  G GGQ  N T + V + HIP+G+VV+C Q RS
Sbjct: 41  VQMAGKKDYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRS 100

Query: 269 QHKNKAQAWNMLRAKL 284
             +N+  A  +L+ K+
Sbjct: 101 VDQNRKLARKILQEKV 116


>gi|50545671|ref|XP_500374.1| YALI0B01144p [Yarrowia lipolytica]
 gi|49646240|emb|CAG82589.1| YALI0B01144p [Yarrowia lipolytica]
          Length = 154

 Score = 41.3 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 29/90 (32%), Positives = 46/90 (51%)

Query: 198 SNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPT 257
            ++ R  S S   +          ++ E++ R    R SG GGQ +N   +  +ITHIPT
Sbjct: 3   KSASRAFSTSRALLKKTPQMPPRPKVDENEIRESFIRGSGPGGQCINRRSTRCQITHIPT 62

Query: 258 GVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           G+VV  Q+ RS  +N+  A  +L  KL ++
Sbjct: 63  GLVVSSQKTRSLEENRKIARQILADKLEQM 92


>gi|210633119|ref|ZP_03297686.1| hypothetical protein COLSTE_01595 [Collinsella stercoris DSM 13279]
 gi|210159273|gb|EEA90244.1| hypothetical protein COLSTE_01595 [Collinsella stercoris DSM 13279]
          Length = 673

 Score = 41.3 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 9/75 (12%), Positives = 20/75 (26%), Gaps = 9/75 (12%)

Query: 3   LSRQLNCLGGLFD-----WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI- 56
           L+R+L              +    R   L        L+ +  +    + E   L   + 
Sbjct: 592 LNRRLKGTKDRLKKVEAALEVKRARYDELMALMASEELYADQDKFNEALAEYNALKQELP 651

Query: 57  ---SFIKEIQDRLCD 68
                  E+   + +
Sbjct: 652 GLEDEWLELSTTIEE 666


>gi|322419681|ref|YP_004198904.1| Class I peptide chain release factor [Geobacter sp. M18]
 gi|320126068|gb|ADW13628.1| Class I peptide chain release factor [Geobacter sp. M18]
          Length = 106

 Score = 41.3 bits (95), Expect = 0.21,   Method: Composition-based stats.
 Identities = 39/101 (38%), Positives = 50/101 (49%), Gaps = 15/101 (14%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
            +EI ESD +++ YRASG GGQH NTTDSAVRI H+PTG+V Q  + RSQ +N+ +A   
Sbjct: 1   MVEIKESDIKVEFYRASGPGGQHRNTTDSAVRIRHLPTGIVAQASESRSQAQNREKALER 60

Query: 280 LRAKLYEL---------------ELQKREEIANIGESSKTE 305
           L   L                    +KR          K  
Sbjct: 61  LAEMLRRREQKRKKRIATKVPRGAKEKRLSDKKAVSERKKL 101


>gi|46446182|ref|YP_007547.1| putative peptide chain release factor 2 [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|46399823|emb|CAF23272.1| putative peptide chain release factor 2 [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 118

 Score = 41.3 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 31/65 (47%), Positives = 47/65 (72%)

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           +C++ T+R+SG+GGQH+N T+SAVR+TH PTG+VV  Q  RSQ++NK      LR  + +
Sbjct: 18  ECQVQTFRSSGSGGQHINVTNSAVRLTHFPTGIVVSSQTFRSQYRNKQNCLAKLRQTVEK 77

Query: 287 LELQK 291
           L  ++
Sbjct: 78  LNYRQ 82


>gi|254502936|ref|ZP_05115087.1| ABC transporter, ATP-binding protein [Labrenzia alexandrii DFL-11]
 gi|222439007|gb|EEE45686.1| ABC transporter, ATP-binding protein [Labrenzia alexandrii DFL-11]
          Length = 628

 Score = 41.3 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 9/72 (12%), Positives = 27/72 (37%), Gaps = 4/72 (5%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQHLD-NAISFIK 60
           L ++++      +     Q+++ ++    DP  +Q +   A    +ER   +   +   +
Sbjct: 558 LRQKIDAAEK--EMTRLQQKIAKIDDMLADPEFFQTDPNRAAKFAKERAFCEKKLVKTEE 615

Query: 61  EIQDRLCDNLIL 72
           E  +   +    
Sbjct: 616 EWLELSAEFEEA 627


>gi|189426554|ref|YP_001953731.1| class I peptide chain release factor [Geobacter lovleyi SZ]
 gi|189422813|gb|ACD97211.1| Class I peptide chain release factor [Geobacter lovleyi SZ]
          Length = 107

 Score = 41.3 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 1/88 (1%)

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           + IEI+E+D R++ YRASG GGQH NTTDSAVRI H+PTG+VV   + RSQ +N+  A  
Sbjct: 1   MSIEINETDIRVEFYRASGPGGQHRNTTDSAVRIRHLPTGIVVHAAENRSQLRNREVAME 60

Query: 279 MLRAKLYELEL-QKREEIANIGESSKTE 305
            LR  L +    +K+     + +  K +
Sbjct: 61  RLRLALEKRNRVEKKRMATKVPKGQKLQ 88


>gi|229815396|ref|ZP_04445731.1| hypothetical protein COLINT_02443 [Collinsella intestinalis DSM
           13280]
 gi|229809176|gb|EEP44943.1| hypothetical protein COLINT_02443 [Collinsella intestinalis DSM
           13280]
          Length = 670

 Score = 41.3 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 8/69 (11%), Positives = 19/69 (27%), Gaps = 6/69 (8%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI----SFI 59
             +L  +    + D    R   L        L+ +  +    + E   L   +       
Sbjct: 597 KDRLKKVEA--ELDVKRARYDELMALMASEELYADQDKFNAALVEYNGLKQELPALEDEW 654

Query: 60  KEIQDRLCD 68
            E+   + +
Sbjct: 655 LELSTTIEE 663


>gi|254831686|ref|ZP_05236341.1| hypothetical protein Lmon1_10043 [Listeria monocytogenes 10403S]
          Length = 650

 Score = 41.3 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 8/70 (11%), Positives = 30/70 (42%), Gaps = 6/70 (8%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFI 59
            R+L  +      +   ++++ +  +  +P ++Q+  +A  + +E    +   +  +   
Sbjct: 583 KRKLEEIEKSM--EETDEKIAEIELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEW 640

Query: 60  KEIQDRLCDN 69
           ++I + L   
Sbjct: 641 EQISEELESI 650


>gi|118590101|ref|ZP_01547504.1| putative abc transporter atp-binding protein [Stappia aggregata IAM
           12614]
 gi|118437073|gb|EAV43711.1| putative abc transporter atp-binding protein [Stappia aggregata IAM
           12614]
          Length = 627

 Score = 41.3 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 8/72 (11%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLW-QNVIEAKMLMRERQHLD-NAISFIK 60
           L ++++      +      ++  L+    DP  + ++   A    +ER   +   I   +
Sbjct: 557 LKQKIDAAEK--EMKRLQDKIIKLDEALADPEFFAKDPERAAKFAKERAFCEKKLIKTEE 614

Query: 61  EIQDRLCDNLIL 72
           +  +   +    
Sbjct: 615 DWLELSAEFEEA 626


>gi|222623231|gb|EEE57363.1| hypothetical protein OsJ_07511 [Oryza sativa Japonica Group]
          Length = 1610

 Score = 41.3 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 34/114 (29%), Gaps = 2/114 (1%)

Query: 15   DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD-NLILL 73
            D  N   RL    T+      W+   E K + +E+  L   +  ++  + R+ D      
Sbjct: 1438 DKKNLHDRLHEAETQLSQFKAWK-REELKKITKEKNALAERLKGVEASRKRVDDEFKTQY 1496

Query: 74   ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
               LE      +   +         +   + E+L +           +    G 
Sbjct: 1497 IHTLETSIQEEMARHAPVYGVGVEALSLDELETLTNIHERGLRQIHAIRQRKGS 1550


>gi|70984320|ref|XP_747675.1| peptidyl-tRNA hydrolase domain protein [Aspergillus fumigatus
           Af293]
 gi|66845302|gb|EAL85637.1| peptidyl-tRNA hydrolase domain protein [Aspergillus fumigatus
           Af293]
 gi|159122461|gb|EDP47582.1| peptidyl-tRNA hydrolase domain protein [Aspergillus fumigatus
           A1163]
          Length = 208

 Score = 41.3 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 2/103 (1%)

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
              SF+             ++I ++D  +   + +G GGQ +N T+SAV++ H PTG+VV
Sbjct: 32  LRRSFTLASSLSAKQLPPRLKIDDADLTVSYLKGTGPGGQKINKTNSAVQLIHKPTGIVV 91

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           + Q  RS+ +N+  A  +L  K+   EL K +   N   + + 
Sbjct: 92  KSQATRSRSQNEKIARQILADKVE--ELLKGDASRNAIRAERA 132


>gi|291414256|ref|XP_002723382.1| PREDICTED: hypothetical protein [Oryctolagus cuniculus]
          Length = 165

 Score = 41.3 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 8/82 (9%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
             + E++ R    +  G GGQ  N T + V + H+P+G+VV+C Q RS  +N+  A  +L
Sbjct: 53  PPLDENELREQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQNRKLARRIL 112

Query: 281 RAKLY--------ELELQKREE 294
           + K+          +  +K+E 
Sbjct: 113 QEKVDVFYHGENSLVYREKQEA 134


>gi|307946015|ref|ZP_07661350.1| holdfast attachment protein C [Roseibium sp. TrichSKD4]
 gi|307769679|gb|EFO28905.1| holdfast attachment protein C [Roseibium sp. TrichSKD4]
          Length = 605

 Score = 41.3 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 9/63 (14%), Positives = 24/63 (38%), Gaps = 4/63 (6%)

Query: 16  WDNAVQRLSFLNTKTEDPHLW-QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
            +    +L  L  +  DP+L+ +N  +   L      + +       ++++  +  +L E
Sbjct: 545 IEALEAKLEKLQAEMNDPNLYAKNPDKFAKLS---AQITDVTEQKGALEEQWLELEMLNE 601

Query: 75  LAL 77
              
Sbjct: 602 EMN 604


>gi|189241033|ref|XP_971712.2| PREDICTED: similar to AGAP012195-PA [Tribolium castaneum]
          Length = 132

 Score = 41.3 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 34/103 (33%), Positives = 50/103 (48%)

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
           R     SI  +  +D S   ++ ES+      R SG GGQ  N T + V + H+PTG+VV
Sbjct: 4   RTRLIFSIVRFKHIDYSRVPQLVESELEEQHVRGSGPGGQATNKTSNCVVLKHVPTGLVV 63

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           +C + RS  +N+ +A   L  KL  L    +   A + E  K 
Sbjct: 64  KCHETRSLDQNRKKARQYLVTKLDNLLNGDQSVEAQMREIEKK 106


>gi|210620550|ref|ZP_03292098.1| hypothetical protein CLOHIR_00041 [Clostridium hiranonis DSM 13275]
 gi|210155264|gb|EEA86270.1| hypothetical protein CLOHIR_00041 [Clostridium hiranonis DSM 13275]
          Length = 638

 Score = 40.9 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 7/65 (10%), Positives = 29/65 (44%), Gaps = 3/65 (4%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKEI 62
             ++  L    D +   ++++ L+       ++ N  ++K +  E+  L++ ++   ++ 
Sbjct: 576 KNKIKKLED--DIEQTEKKIAGLDMMLCQEEIYSNPEKSKEVNLEKAELEDKLASLYEKW 633

Query: 63  QDRLC 67
           +  + 
Sbjct: 634 EQIME 638


>gi|148726036|emb|CAN87843.1| novel protein [Danio rerio]
          Length = 137

 Score = 40.9 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 9/109 (8%)

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
             S +             + E +      R SG GGQ  N T + V + HIP+G+VV+C 
Sbjct: 5   WPSVLPAAGKKYQIELPVVHEEELEEQFVRGSGPGGQATNKTSNCVVLRHIPSGIVVKCH 64

Query: 265 QERSQHKNKAQAWNMLRAKL---------YELELQKREEIANIGESSKT 304
           + RS   N+ +A  +LR KL           L+++K        +  K 
Sbjct: 65  ETRSVDLNRKRAREILREKLEVAYKGEESELLKMKKESMQKKQDKRRKV 113


>gi|222056398|ref|YP_002538760.1| Class I peptide chain release factor [Geobacter sp. FRC-32]
 gi|221565687|gb|ACM21659.1| Class I peptide chain release factor [Geobacter sp. FRC-32]
          Length = 108

 Score = 40.9 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 39/78 (50%), Positives = 56/78 (71%)

Query: 219 IEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWN 278
           + +EI E+D +++ YRASG GGQH NTTDSAVRI H+PTG+VVQ  + RSQ +N+  A +
Sbjct: 1   MTMEIKETDIKVEFYRASGPGGQHRNTTDSAVRIRHLPTGIVVQAAENRSQWQNRELAMS 60

Query: 279 MLRAKLYELELQKREEIA 296
            L+  L + E + ++ IA
Sbjct: 61  RLQQALIKRERKTKKRIA 78


>gi|317127421|ref|YP_004093703.1| LPXTG-motif cell wall anchor domain protein [Bacillus
            cellulosilyticus DSM 2522]
 gi|315472369|gb|ADU28972.1| LPXTG-motif cell wall anchor domain protein [Bacillus
            cellulosilyticus DSM 2522]
          Length = 1287

 Score = 40.9 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 36/104 (34%), Gaps = 9/104 (8%)

Query: 2    KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            +L  ++  L G  +  +   RLS +    E   L  N  E +  +    HL+  I  +K+
Sbjct: 1147 ELQARIADLEGSSEIADLENRLSEIEGLLE--ELKSNFNELEEYV---SHLEALIKDLKD 1201

Query: 62   ----IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101
                ++ +L D         EEDD      + +           
Sbjct: 1202 EIAALKAQLEDLPEAPGAPEEEDDDKDGPASKEEKDANDSPKND 1245


>gi|297734721|emb|CBI16955.3| unnamed protein product [Vitis vinifera]
          Length = 224

 Score = 40.9 bits (94), Expect = 0.27,   Method: Composition-based stats.
 Identities = 25/54 (46%), Positives = 37/54 (68%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             E     C + T+++SG GGQH N  +SAVR+ H+PTG++ Q  ++RSQHKN+
Sbjct: 56  SDEQLMKQCEMSTFKSSGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHKNR 109


>gi|225459890|ref|XP_002263666.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 507

 Score = 40.9 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 25/54 (46%), Positives = 37/54 (68%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
             E     C + T+++SG GGQH N  +SAVR+ H+PTG++ Q  ++RSQHKN+
Sbjct: 56  SDEQLMKQCEMSTFKSSGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQHKNR 109


>gi|269123013|ref|YP_003305590.1| YadA domain-containing protein [Streptobacillus moniliformis DSM
            12112]
 gi|268314339|gb|ACZ00713.1| YadA domain protein [Streptobacillus moniliformis DSM 12112]
          Length = 2092

 Score = 40.9 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 7/97 (7%)

Query: 15   DWDNAVQRLSFLNTKTEDPHLWQNVIEAKM---LMRERQHLDNAISFIKEIQDRLCDNLI 71
            + D   ++L   N K     + QN    +    L +E + L + IS I++I+    D   
Sbjct: 1929 ELDGINKKLEEQNNKL----IAQNNKLNEKRGDLSKELKELKDKISVIEKIKMNEDDLYT 1984

Query: 72   LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL 108
            L    L   + +  QE        +L   YK  +  +
Sbjct: 1985 LDGYRLGIHELTKSQEEMLMNIVRELNENYKNRKIYI 2021


>gi|298531050|ref|ZP_07018451.1| ABC transporter related protein [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509073|gb|EFI32978.1| ABC transporter related protein [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 651

 Score = 40.9 bits (94), Expect = 0.29,   Method: Composition-based stats.
 Identities = 9/63 (14%), Positives = 24/63 (38%), Gaps = 4/63 (6%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL----DNAISFIKEIQDRLCDNLI 71
            + ++ R   L      P   Q+    + L RE + +    D+ +  ++E++ ++     
Sbjct: 589 LEQSLLRQEELENAMSLPETCQDPDRIRELSREYREVCAQNDSLMHRLEELEQQITQLEA 648

Query: 72  LLE 74
              
Sbjct: 649 AKP 651


>gi|297621679|ref|YP_003709816.1| putative peptide chain release factor 1 [Waddlia chondrophila WSU
           86-1044]
 gi|297376980|gb|ADI38810.1| putative peptide chain release factor 1 [Waddlia chondrophila WSU
           86-1044]
          Length = 139

 Score = 40.9 bits (94), Expect = 0.29,   Method: Composition-based stats.
 Identities = 28/90 (31%), Positives = 42/90 (46%)

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           +  +      + I   D        SG GGQ VN T S V + H P+G+ ++CQ ERS+ 
Sbjct: 8   INELQRRMESLGIRNEDLTEKFILGSGKGGQKVNKTASCVYLKHEPSGIEIKCQLERSRE 67

Query: 271 KNKAQAWNMLRAKLYELELQKREEIANIGE 300
            N+  A  +L  K+ E  L+ + E     E
Sbjct: 68  LNRFYARRLLCEKIEEKILKIKTEKQKEIE 97


>gi|294658124|ref|XP_460455.2| DEHA2F02090p [Debaryomyces hansenii CBS767]
 gi|202952893|emb|CAG88762.2| DEHA2F02090p [Debaryomyces hansenii]
          Length = 180

 Score = 40.9 bits (94), Expect = 0.29,   Method: Composition-based stats.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 3/90 (3%)

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRID---TYRASGAGGQHVNTTDSAVRITHIPTG 258
             TS+ +  +          +    +  ID        G GGQ +N ++S V++TH PTG
Sbjct: 15  VSTSYVNYAIPKKNKMPPRPKWLIVEEEIDEAFLKGGRGPGGQKINKSNSKVQLTHKPTG 74

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           +VV CQ  RSQ +N+ +A  +L  KL EL+
Sbjct: 75  LVVTCQYSRSQEQNRKRAREILALKLDELQ 104


>gi|56753039|gb|AAW24729.1| SJCHGC03759 protein [Schistosoma japonicum]
          Length = 163

 Score = 40.9 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 31/109 (28%), Positives = 43/109 (39%), Gaps = 5/109 (4%)

Query: 200 SRRHTSFSSIWVYPVV-----DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITH 254
           SR +   +     P           +   +E D      R  G GGQ +NTT + V + H
Sbjct: 12  SRVYNWLAKCNSSPYCFISRFYSKNQWLFNECDLSEMFVRGWGPGGQSINTTANCVVLKH 71

Query: 255 IPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSK 303
            PTG++V+CQ  R   KN+  A   L  KL      +   I  I    K
Sbjct: 72  EPTGIMVKCQDSRELEKNRELARRRLNDKLDVHFNGENSRIQQIHRQQK 120


>gi|269123085|ref|YP_003305662.1| YadA domain-containing protein [Streptobacillus moniliformis DSM
            12112]
 gi|268314411|gb|ACZ00785.1| YadA domain protein [Streptobacillus moniliformis DSM 12112]
          Length = 2075

 Score = 40.9 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 7/61 (11%)

Query: 15   DWDNAVQRLSFLNTKTEDPHLWQNVIEAKM---LMRERQHLDNAISFIKEIQDRLCDNLI 71
            + D   ++L   N K     + QN    +    L +E + L + IS I++I+    D   
Sbjct: 1912 ELDGINKKLEEQNNKL----IAQNNKLNEKRGDLSKELKELKDKISVIEKIKMNEDDLYT 1967

Query: 72   L 72
            L
Sbjct: 1968 L 1968


>gi|19075491|ref|NP_587991.1| sorting nexin Snx12 (predicted) [Schizosaccharomyces pombe 972h-]
 gi|74625851|sp|Q9USN1|SNX12_SCHPO RecName: Full=Sorting nexin-12
 gi|5748684|emb|CAB53076.1| sorting nexin Snx12 (predicted) [Schizosaccharomyces pombe]
          Length = 1010

 Score = 40.9 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 41/122 (33%), Gaps = 3/122 (2%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           ++LS  ++ L    + +    +L+ +NT  +   L  +  + K L +  Q ++ AI   +
Sbjct: 623 LQLSESIDELNN--NIEELKAQLNAINTLIKKAELVADQKQLKSLTKNHQEIEKAIHRKE 680

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
             +D+        +L           + S         V   + E  L      +   + 
Sbjct: 681 RQRDQYMSQEEDSKLFNRSRVSIDSFKISKEENTPDFAVYTIRIE-RLENGHVRSGWMVA 739

Query: 121 VH 122
             
Sbjct: 740 RR 741


>gi|33592829|ref|NP_880473.1| ABC transporter ATP-binding protein [Bordetella pertussis Tohama I]
 gi|33572477|emb|CAE42048.1| probable ABC transporter ATP-binding protein [Bordetella pertussis
           Tohama I]
 gi|332382242|gb|AEE67089.1| ABC transporter ATP-binding protein [Bordetella pertussis CS]
          Length = 641

 Score = 40.9 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 15/84 (17%)

Query: 2   KLSRQLNCLGGLF---------DWDNAVQRLSFLNTKTEDPHLWQNVIEA--KMLMRER- 49
           +  ++L  L             D + A  RL  L+    D  L+ +      + +M E  
Sbjct: 553 EQRQRLATLRKPLAAKLAKVEADMERARARLQELDAVIADADLYSDARRTERQQVMTEHG 612

Query: 50  ---QHLDNAISFIKEIQDRLCDNL 70
              + L++      EIQ  L +  
Sbjct: 613 ESGKRLNDLEEQWLEIQQALEEIE 636


>gi|88706760|ref|ZP_01104461.1| ABC transporter, ATP-binding protein [Congregibacter litoralis
           KT71]
 gi|88698941|gb|EAQ96059.1| ABC transporter, ATP-binding protein [Congregibacter litoralis
           KT71]
          Length = 629

 Score = 40.9 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 5/56 (8%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQH----LDNAISFIKEIQDR 65
           D +    R   L T   DP  ++ +  E K L+ E       L+  I    E+++R
Sbjct: 573 DIEALESRQGELETLCADPAFYERDPREVKDLLAELASIGGTLEEKIERWTELEER 628


>gi|33601163|ref|NP_888723.1| ABC transporter ATP-binding protein [Bordetella bronchiseptica
           RB50]
 gi|33575598|emb|CAE32676.1| probable ABC transporter ATP-binding protein [Bordetella
           bronchiseptica RB50]
          Length = 641

 Score = 40.9 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 15/84 (17%)

Query: 2   KLSRQLNCLGGLF---------DWDNAVQRLSFLNTKTEDPHLWQNVIEA--KMLMRER- 49
           +  ++L  L             D + A  RL  L+    D  L+ +      + +M E  
Sbjct: 553 EQRQRLATLRKPLAAKLAKVEADMERARARLQELDAVIADADLYSDARRTERQQVMTEHG 612

Query: 50  ---QHLDNAISFIKEIQDRLCDNL 70
              + L++      EIQ  L +  
Sbjct: 613 ESGKRLNDLEEQWLEIQQALEEIE 636


>gi|24654113|ref|NP_725560.1| CG30100 [Drosophila melanogaster]
 gi|21627121|gb|AAM68513.1| CG30100 [Drosophila melanogaster]
 gi|157816290|gb|ABV82139.1| AT22563p [Drosophila melanogaster]
          Length = 146

 Score = 40.9 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 8/93 (8%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
             + ESD      R SG GGQ VN T + V + H+PT + V+C   R   KN+ +A  +L
Sbjct: 28  PVLQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHRLASKNRVEARKLL 87

Query: 281 RAKLYEL--------ELQKREEIANIGESSKTE 305
             KL              K +E     E  + +
Sbjct: 88  LEKLDVHLNGEHSIAAQVKAQEQRKSTERRRRQ 120


>gi|33596608|ref|NP_884251.1| ABC transporter ATP-binding protein [Bordetella parapertussis
           12822]
 gi|33573309|emb|CAE37292.1| probable ABC transporter ATP-binding protein [Bordetella
           parapertussis]
          Length = 641

 Score = 40.9 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 15/84 (17%)

Query: 2   KLSRQLNCLGGLF---------DWDNAVQRLSFLNTKTEDPHLWQNVIEA--KMLMRER- 49
           +  ++L  L             D + A  RL  L+    D  L+ +      + +M E  
Sbjct: 553 EQRQRLATLRKPLAAKLAKVEADMERARARLQELDAVIADADLYSDARRTERQQVMTEHG 612

Query: 50  ---QHLDNAISFIKEIQDRLCDNL 70
              + L++      EIQ  L +  
Sbjct: 613 ESGKRLNDLEEQWLEIQQALEEIE 636


>gi|118587642|ref|ZP_01545052.1| ABC transporter, ATP-binding protein [Stappia aggregata IAM 12614]
 gi|118439264|gb|EAV45895.1| ABC transporter, ATP-binding protein [Stappia aggregata IAM 12614]
          Length = 603

 Score = 40.9 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 19/58 (32%), Gaps = 1/58 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLW-QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
            +    RL  L  +  DP L+ +N  +   + ++   L       +E    L      
Sbjct: 545 IEKLEARLETLQAEMNDPQLYVKNPDKFAKISQQITDLTAEKDAAEEQWLELEMLNEA 602


>gi|118581948|ref|YP_903198.1| class I peptide chain release factor [Pelobacter propionicus DSM
           2379]
 gi|118504658|gb|ABL01141.1| Class I peptide chain release factor [Pelobacter propionicus DSM
           2379]
          Length = 109

 Score = 40.9 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 39/73 (53%), Positives = 49/73 (67%)

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
            +  +EI E D RI+ YRASG GGQH NTTDSAVRI H+PTG+V Q  + RSQ +N+ +A
Sbjct: 1   MTTMVEIREEDIRIEYYRASGPGGQHRNTTDSAVRIRHLPTGIVAQASESRSQSRNRERA 60

Query: 277 WNMLRAKLYELEL 289
              L A L + E 
Sbjct: 61  MERLTAALEKRER 73


>gi|153873069|ref|ZP_02001774.1| ABC transporter ATP-binding protein [Beggiatoa sp. PS]
 gi|152070465|gb|EDN68226.1| ABC transporter ATP-binding protein [Beggiatoa sp. PS]
          Length = 625

 Score = 40.9 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 8/69 (11%), Positives = 28/69 (40%), Gaps = 2/69 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L  ++  +    + D   +  + +     DP ++ +  + +  +R++  L   +   +E+
Sbjct: 553 LQNRVKKVET--ELDRLTKEKAAIEALLGDPTIYDDKNKVQEYVRQQTTLSQNLQQAEEM 610

Query: 63  QDRLCDNLI 71
              + + L 
Sbjct: 611 WLEITEILE 619


>gi|189485401|ref|YP_001956342.1| peptidyl-tRNA hydrolase-like protein [uncultured Termite group 1
           bacterium phylotype Rs-D17]
 gi|170287360|dbj|BAG13881.1| peptidyl-tRNA hydrolase-like protein [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 136

 Score = 40.9 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 29/78 (37%), Positives = 42/78 (53%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + ESD      R+SG GGQ+VN   + V + H PTG+ V+C++ER Q  N+  A  +L  
Sbjct: 23  VQESDIEEKFIRSSGKGGQNVNKVSTTVYLKHYPTGIEVKCRRERIQGLNRFFARRLLAE 82

Query: 283 KLYELELQKREEIANIGE 300
           K+ E  L +  E     E
Sbjct: 83  KIEEKVLGRISEKRQKIE 100


>gi|119467602|ref|XP_001257607.1| peptidyl-tRNA hydrolase domain protein [Neosartorya fischeri NRRL
           181]
 gi|119405759|gb|EAW15710.1| peptidyl-tRNA hydrolase domain protein [Neosartorya fischeri NRRL
           181]
          Length = 208

 Score = 40.6 bits (93), Expect = 0.34,   Method: Composition-based stats.
 Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 2/103 (1%)

Query: 202 RHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVV 261
              SF+             ++I ++D  +   + +G GGQ +N T+SAV++ H PTG+VV
Sbjct: 32  LRRSFTLASSLSAKQLPPRLKIDDADLTVSYLKGTGPGGQKINKTNSAVQLIHKPTGIVV 91

Query: 262 QCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           + Q  RS+ +N+  A  +L  K+   EL K +   N   + + 
Sbjct: 92  KSQATRSRSQNEKIARQILADKVE--ELLKGDASRNAIRAERA 132


>gi|281212159|gb|EFA86319.1| ABC transporter family [Polysphondylium pallidum PN500]
          Length = 825

 Score = 40.6 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 61/182 (33%), Gaps = 15/182 (8%)

Query: 3   LSRQLNCLGG----LFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA--- 55
           L R+++ L        D +   +R+  +  + E+P    +   A+ L+++   L +    
Sbjct: 301 LRREMDELESQDASSSDMEAICERIGEIMLELEEPD--DSKERAEALLKKLGFLKSMRDG 358

Query: 56  -ISFIK-EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113
            +S +    + RL   L L                  +       +     +++      
Sbjct: 359 SVSALSGGWRARLEMALALFAEPEILFLDEPTNHLDLHAVFQLASILRNNHQNMTVIVVS 418

Query: 114 SNDAYLEVHAGA----GGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSAT 169
            + ++L++ +       G   Q  A        + AE ++F     E    EEA   ++T
Sbjct: 419 HDASFLDLVSTDILSINGCMLQQMAGNYSAFEEKAAEYKRFHEHIYENRVREEARQNAST 478

Query: 170 LL 171
             
Sbjct: 479 AQ 480


>gi|229815133|ref|ZP_04445470.1| hypothetical protein COLINT_02176 [Collinsella intestinalis DSM
           13280]
 gi|229809363|gb|EEP45128.1| hypothetical protein COLINT_02176 [Collinsella intestinalis DSM
           13280]
          Length = 126

 Score = 40.6 bits (93), Expect = 0.35,   Method: Composition-based stats.
 Identities = 31/64 (48%), Positives = 42/64 (65%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            DC I  +RASG GGQ VNTTDSAVR+ H+P+G+VV  ++ RSQ +N+A     L+ +L 
Sbjct: 24  RDCDIQAFRASGPGGQGVNTTDSAVRMRHVPSGIVVTARESRSQFQNRASCLRKLKEELT 83

Query: 286 ELEL 289
               
Sbjct: 84  RRAR 87


>gi|291166817|gb|EFE28863.1| ABC transporter, ATP-binding protein [Filifactor alocis ATCC 35896]
          Length = 643

 Score = 40.6 bits (93), Expect = 0.37,   Method: Composition-based stats.
 Identities = 11/74 (14%), Positives = 30/74 (40%), Gaps = 6/74 (8%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER----QHLDNAIS 57
           +L +Q+  L          +++  L+ +     ++ N  EA  + +E+      L+  + 
Sbjct: 572 QLKKQIQTLEET--IMQLEEKIEQLDLELCKEEVYSNPSEAMRVQKEKENASSSLEQTML 629

Query: 58  FIKEIQDRLCDNLI 71
             +E+ + L +   
Sbjct: 630 EWEELHETLEEMDE 643


>gi|39996025|ref|NP_951976.1| ABC transporter ATP-binding protein [Geobacter sulfurreducens PCA]
 gi|39982790|gb|AAR34249.1| ABC transporter, ATP-binding protein [Geobacter sulfurreducens PCA]
          Length = 645

 Score = 40.6 bits (93), Expect = 0.37,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 22/61 (36%), Gaps = 3/61 (4%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKEIQ 63
           ++L  L            L+ L  +  DP  + +  +A+    E   L   I+   +E +
Sbjct: 583 KRLEELESA--IAAEEGLLADLEARMADPAFFDDHEQARRGGEEHAGLTARIASLYEEWE 640

Query: 64  D 64
            
Sbjct: 641 S 641


>gi|302690942|ref|XP_003035150.1| hypothetical protein SCHCODRAFT_52216 [Schizophyllum commune H4-8]
 gi|300108846|gb|EFJ00248.1| hypothetical protein SCHCODRAFT_52216 [Schizophyllum commune H4-8]
          Length = 257

 Score = 40.6 bits (93), Expect = 0.37,   Method: Composition-based stats.
 Identities = 27/68 (39%), Positives = 40/68 (58%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
            E+ E D      R SG GGQ +N T + V++ H PTG+ V CQ+ RS  +N+ +A  ++
Sbjct: 151 PELREEDLEESFVRGSGPGGQAINKTANNVQLVHKPTGIRVVCQETRSLEQNRKRARKIM 210

Query: 281 RAKLYELE 288
            AKL +L 
Sbjct: 211 IAKLDQLY 218


>gi|195334889|ref|XP_002034109.1| GM21684 [Drosophila sechellia]
 gi|194126079|gb|EDW48122.1| GM21684 [Drosophila sechellia]
          Length = 146

 Score = 40.6 bits (93), Expect = 0.37,   Method: Composition-based stats.
 Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 8/93 (8%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
             + ESD      R SG GGQ VN T + V + H+PT + V+C   R   KN+ +A  +L
Sbjct: 28  PALQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHRLASKNRVEARKLL 87

Query: 281 RAKLYEL--------ELQKREEIANIGESSKTE 305
             KL              K +E     E  + +
Sbjct: 88  LEKLDVHLNGEHSIAAQIKAQEQRKSTERRRRQ 120


>gi|195558953|ref|XP_002077323.1| GD20369 [Drosophila simulans]
 gi|194202425|gb|EDX16001.1| GD20369 [Drosophila simulans]
          Length = 146

 Score = 40.6 bits (93), Expect = 0.38,   Method: Composition-based stats.
 Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 8/93 (8%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
             + ESD      R SG GGQ VN T + V + H+PT + V+C   R   KN+ +A  +L
Sbjct: 28  PALQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHRLASKNRVEARKLL 87

Query: 281 RAKLYEL--------ELQKREEIANIGESSKTE 305
             KL              K +E     E  + +
Sbjct: 88  LEKLDVHLNGEHSIAAQIKAQEQRKSTERRRRQ 120


>gi|327276060|ref|XP_003222789.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like [Anolis carolinensis]
          Length = 197

 Score = 40.6 bits (93), Expect = 0.39,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 39/63 (61%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
            ++E+D      R SG GGQ  N T + V + H+P+G+VV+C Q RS  +N+ +A  +L+
Sbjct: 87  PLNEADLEEQFVRGSGPGGQATNKTSNCVVLKHLPSGIVVKCHQTRSVEQNRKKARTILQ 146

Query: 282 AKL 284
            K+
Sbjct: 147 EKV 149


>gi|156552109|ref|XP_001605206.1| PREDICTED: similar to conserved hypothetical protein [Nasonia
           vitripennis]
          Length = 159

 Score = 40.6 bits (93), Expect = 0.39,   Method: Composition-based stats.
 Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 8/93 (8%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
            +I+E D  I   R SG GGQ  N T + V + H+PTG+V++C + RSQ +N   A   L
Sbjct: 43  PKINEDDLEIQYVRGSGPGGQSTNKTSNNVVMKHLPTGLVIKCHETRSQTQNLKIAKEKL 102

Query: 281 RAKLYELE--------LQKREEIANIGESSKTE 305
             KL  L          +K+       E  + +
Sbjct: 103 INKLDLLYNGEDAVENQKKKLLAKKTSEKQRRQ 135


>gi|213423387|ref|ZP_03356375.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 62

 Score = 40.6 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 34/62 (54%)

Query: 141 YTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNS 200
           Y+R+AE R+++ E + + +GE  G K     I G   YG LK E G HR+ R+   +S  
Sbjct: 1   YSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQG 60

Query: 201 RR 202
           R 
Sbjct: 61  RI 62


>gi|323488873|ref|ZP_08094112.1| ABC transporter ATP-binding protein [Planococcus donghaensis
           MPA1U2]
 gi|323397436|gb|EGA90243.1| ABC transporter ATP-binding protein [Planococcus donghaensis
           MPA1U2]
          Length = 644

 Score = 40.6 bits (93), Expect = 0.42,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 27/85 (31%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEE 79
             +L  L  +  +P ++ N  E   +M+E   L +        Q       IL  +    
Sbjct: 98  EAKLRHLEAQMANPDVYNNPEENNKVMKEYDLLQHDFKDAGGYQYESDTRAILHGMKFYP 157

Query: 80  DDCSILQETSDNLQRIKLEVEYKQF 104
            D      +    Q+ +L +     
Sbjct: 158 HDYDKKVTSLSGGQKTRLMLAKHLL 182


>gi|319784383|ref|YP_004143859.1| ABC transporter [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317170271|gb|ADV13809.1| ABC transporter related protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 625

 Score = 40.6 bits (93), Expect = 0.42,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 17  DNAVQRLSFLNTKTEDPHLW-QNVIEAKMLMRERQHLDNAISFIKE 61
           D   +R+  +  +  +P ++ ++   A  L +ER  L   ++  +E
Sbjct: 565 DRIRKRIDGIEDELSNPAVYEKDPSTATRLAKERSQLAQTLAGHEE 610


>gi|139437086|ref|ZP_01771246.1| Hypothetical protein COLAER_00223 [Collinsella aerofaciens ATCC
           25986]
 gi|133776733|gb|EBA40553.1| Hypothetical protein COLAER_00223 [Collinsella aerofaciens ATCC
           25986]
          Length = 132

 Score = 40.6 bits (93), Expect = 0.42,   Method: Composition-based stats.
 Identities = 33/77 (42%), Positives = 46/77 (59%)

Query: 208 SIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQER 267
             W        + +E    DC +  +RA+G GGQ VNTTDSAVR+ H PTG+VV  ++ R
Sbjct: 12  MGWREYAHYAEMSVEELARDCEVQVFRATGPGGQGVNTTDSAVRMKHGPTGIVVTARESR 71

Query: 268 SQHKNKAQAWNMLRAKL 284
           SQ +N++     LRA+L
Sbjct: 72  SQFQNRSCCLRKLRAEL 88


>gi|322421630|ref|YP_004200853.1| Class I peptide chain release factor [Geobacter sp. M18]
 gi|320128017|gb|ADW15577.1| Class I peptide chain release factor [Geobacter sp. M18]
          Length = 143

 Score = 40.6 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 27/69 (39%), Positives = 39/69 (56%)

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
               ++ ++E D       ASG GGQHVN + S V + HIP+G+ V+C + RSQ  N+  
Sbjct: 16  TKMEQLGVAEKDLEERFVHASGRGGQHVNKSSSCVYLKHIPSGLEVKCMESRSQSLNRFL 75

Query: 276 AWNMLRAKL 284
           A  +L  KL
Sbjct: 76  ARRLLLEKL 84


>gi|327355568|gb|EGE84425.1| peptidyl-tRNA hydrolase domain-containing protein [Ajellomyces
           dermatitidis ATCC 18188]
          Length = 184

 Score = 40.6 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 1/120 (0%)

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
                 +   +     FS      V       ++  S+      + +G GGQ +N T+SA
Sbjct: 4   WRIRPQWRQPNGILRLFSHCCRLFVKQMPPRPKLDPSEVTGSYLKGTGPGGQAINKTNSA 63

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-YELELQKREEIANIGESSKTEIGW 308
           V++ H PTG+VV+ Q  RS+ +N+  A  +L  K+  +L+ +K           K +   
Sbjct: 64  VQLIHKPTGIVVKSQATRSRTQNQKIAMGILAEKVELQLKGEKSRAAIKAETKRKRKASR 123


>gi|212526542|ref|XP_002143428.1| peptidyl-tRNA hydrolase domain protein [Penicillium marneffei ATCC
           18224]
 gi|210072826|gb|EEA26913.1| peptidyl-tRNA hydrolase domain protein [Penicillium marneffei ATCC
           18224]
          Length = 177

 Score = 40.6 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 32/100 (32%), Positives = 51/100 (51%)

Query: 205 SFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQ 264
           SFS+     V       ++ + D      + +G GGQ +N T+SAV++ H PTG+VV+ Q
Sbjct: 23  SFSTCPALAVKQLPPRPKLDDKDITGSYLKGTGPGGQKINKTNSAVQLIHKPTGIVVKSQ 82

Query: 265 QERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
             RS+ +N+  A  +L AK+  LE  ++   A      K 
Sbjct: 83  ATRSRSQNQKIAKEILAAKVEVLEKGEQSREAIKNALKKK 122


>gi|164655297|ref|XP_001728779.1| hypothetical protein MGL_4114 [Malassezia globosa CBS 7966]
 gi|159102663|gb|EDP41565.1| hypothetical protein MGL_4114 [Malassezia globosa CBS 7966]
          Length = 248

 Score = 40.2 bits (92), Expect = 0.45,   Method: Composition-based stats.
 Identities = 26/75 (34%), Positives = 37/75 (49%)

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
              + I++ E D R    R SG GGQ +N   + V + HIPT   + CQ  RS+ +N+  
Sbjct: 123 SKKMPIDLDERDIRERFIRGSGPGGQAINKLSTNVELVHIPTSTRITCQLTRSRAQNREL 182

Query: 276 AWNMLRAKLYELELQ 290
           A   L  +L  L  Q
Sbjct: 183 ARRQLSQRLEWLIKQ 197


>gi|299821508|ref|ZP_07053396.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Listeria grayi DSM 20601]
 gi|299817173|gb|EFI84409.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Listeria grayi DSM 20601]
          Length = 650

 Score = 40.2 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 17/39 (43%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53
           +     ++L  +  K  DP +  N  + + L+++   L 
Sbjct: 93  ELQQMERQLREIELKIADPEIISNEAQFQSLLKQYDELQ 131



 Score = 39.8 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 32/70 (45%), Gaps = 6/70 (8%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEA----KMLMRERQHLDNAIS 57
           KL R+L  +    + +    ++S L +   +P ++Q+  +       L +++Q  +  + 
Sbjct: 583 KLERRLTEIEK--ELEKTEAQISELESLLTEPTVYQDHEKVYEVNTQLEQQKQAAEKWME 640

Query: 58  FIKEIQDRLC 67
             +E+ + L 
Sbjct: 641 EWEEVSENLE 650


>gi|225180872|ref|ZP_03734320.1| ABC transporter related protein [Dethiobacter alkaliphilus AHT 1]
 gi|225168353|gb|EEG77156.1| ABC transporter related protein [Dethiobacter alkaliphilus AHT 1]
          Length = 641

 Score = 40.2 bits (92), Expect = 0.46,   Method: Composition-based stats.
 Identities = 8/58 (13%), Positives = 23/58 (39%), Gaps = 4/58 (6%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFIKEIQDRLCD 68
           +     +R++ L  +   P ++++   A    +E    +  L+   +  +E    L +
Sbjct: 583 EISRVEERINELEAELACPEVFEDYKLASEKGQEMEELKAMLEKLFASWEEYTILLEE 640


>gi|110634105|ref|YP_674313.1| ABC transporter related [Mesorhizobium sp. BNC1]
 gi|110285089|gb|ABG63148.1| ABC transporter related protein [Chelativorans sp. BNC1]
          Length = 625

 Score = 40.2 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 31/75 (41%), Gaps = 11/75 (14%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQHL--------D 53
           L++++    GL   +   +R+  +  +  DP L+  +  +   L +ER  L        +
Sbjct: 553 LAKEIKATEGL--IERTRKRIEAIEAQMADPGLYARDPGKISTLGKERADLAQALARQEE 610

Query: 54  NAISFIKEIQDRLCD 68
             +    E ++ + +
Sbjct: 611 KWLELSTEYEEGVAE 625


>gi|290892220|ref|ZP_06555216.1| ABC transporter [Listeria monocytogenes FSL J2-071]
 gi|290558343|gb|EFD91861.1| ABC transporter [Listeria monocytogenes FSL J2-071]
          Length = 650

 Score = 40.2 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 8/70 (11%), Positives = 29/70 (41%), Gaps = 3/70 (4%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-KEI 62
            R+L  +      +   ++++ L  +  +P ++Q+  +A  + +E   +      + +E 
Sbjct: 583 KRKLEEVEKSM--EATDEKIAELEHQLTNPEVFQDHEKALEITQELDAVKATGEKLMEEW 640

Query: 63  QDRLCDNLIL 72
           +    +   +
Sbjct: 641 ETLSEELESM 650


>gi|217963778|ref|YP_002349456.1| ABC transporter ATP-binding protein [Listeria monocytogenes HCC23]
 gi|217333048|gb|ACK38842.1| ABC transporter, ATP-binding protein [Listeria monocytogenes HCC23]
 gi|307571649|emb|CAR84828.1| ABC transporter, ATP-binding protein [Listeria monocytogenes L99]
          Length = 650

 Score = 40.2 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 8/70 (11%), Positives = 29/70 (41%), Gaps = 3/70 (4%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-KEI 62
            R+L  +      +   ++++ L  +  +P ++Q+  +A  + +E   +      + +E 
Sbjct: 583 KRKLEEVEKSM--EATDEKIAELEHQLTNPEVFQDHEKALEITQELDAVKATGEKLMEEW 640

Query: 63  QDRLCDNLIL 72
           +    +   +
Sbjct: 641 ETLSEELESM 650


>gi|118087494|ref|XP_419285.2| PREDICTED: similar to Hook-related protein 1 [Gallus gallus]
          Length = 1888

 Score = 40.2 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 45/142 (31%), Gaps = 3/142 (2%)

Query: 17  DNAVQRLSFLNTKT--EDPHLWQNVIEAKMLMRERQHLDNAISFIKE-IQDRLCDNLILL 73
               +++  L  +   E   L  N   +K LM+E++ L+     ++E ++ ++       
Sbjct: 501 QRLNKKIEELEKEIVQEKQSLQDNQNLSKDLMKEKEQLEKKFETLRENLERQIKLLEQEN 560

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E + +       +       ++K   +  +       E  S    LE        E + +
Sbjct: 561 ERSNQTIASLRQRSQISAEAQMKEIEKENKILHESIKETSSKLNKLEFEIKQVRKEMEHY 620

Query: 134 ANMLLRMYTRWAEKRKFKTEAL 155
                R      E    + E  
Sbjct: 621 KEKAERAEELENELHHLEKENE 642


>gi|169838093|ref|ZP_02871281.1| hypothetical protein cdivTM_13518 [candidate division TM7
           single-cell isolate TM7a]
          Length = 38

 Score = 40.2 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 8/25 (32%), Positives = 14/25 (56%)

Query: 331 EKTSPSDVLDGDLDDFMKATLAIKK 355
                  +LDGDLD+ + A +A ++
Sbjct: 2   TLHRLEGILDGDLDEMIDALIAYEQ 26


>gi|328544687|ref|YP_004304796.1| ABC transporter ATPase [polymorphum gilvum SL003B-26A1]
 gi|326414429|gb|ADZ71492.1| ABC transporter, ATPase subunit [Polymorphum gilvum SL003B-26A1]
          Length = 603

 Score = 40.2 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 15/57 (26%), Gaps = 1/57 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
            +    +L  L     DP L+  N      L  E   L       +E    L     
Sbjct: 543 IEKLDAQLEKLQADMADPDLYSRNPDRFARLSAEITKLTEEKDAAEEQWLELEMLKE 599


>gi|225683891|gb|EEH22175.1| predicted protein [Paracoccidioides brasiliensis Pb03]
          Length = 247

 Score = 40.2 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 12/113 (10%)

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
             FS      V       +++ ++      + SG GGQ +N T+SAV++ H PTG+VV+ 
Sbjct: 97  RFFSHCHQLSVKQMPPRPKLNPAEVTGTYLKGSGPGGQAINKTNSAVQLIHKPTGIVVKS 156

Query: 264 QQERSQHKNKAQAWNMLRAKLYEL------------ELQKREEIANIGESSKT 304
           Q  RS+ +N+  A  +L  K+               E +K+ +  ++ ++ + 
Sbjct: 157 QATRSRTQNQKIAMGILAEKVELHLKGDKSRAAIVAETKKKRKARSVKKARRK 209


>gi|221194820|ref|ZP_03567877.1| ABC transporter, ATP-binding protein [Atopobium rimae ATCC 49626]
 gi|221185724|gb|EEE18114.1| ABC transporter, ATP-binding protein [Atopobium rimae ATCC 49626]
          Length = 678

 Score = 40.2 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 23/69 (33%), Gaps = 2/69 (2%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
            ++L  +        A QR   L     D  L+ +  +    M E   L   I  +++  
Sbjct: 608 KKRLKEVEAA--LQPAHQRYDELMALMADEDLYNDAEKFDACMAEYNALAKKIPALEQEW 665

Query: 64  DRLCDNLIL 72
             L + +  
Sbjct: 666 LELSEKMEA 674


>gi|195488245|ref|XP_002092233.1| GE11778 [Drosophila yakuba]
 gi|194178334|gb|EDW91945.1| GE11778 [Drosophila yakuba]
          Length = 146

 Score = 40.2 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 8/93 (8%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
             + ESD      R SG GGQ VN T + V + H+PT + V+C   R   KN+ +A  +L
Sbjct: 28  PALQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHRLASKNRVEARKLL 87

Query: 281 RAKLYEL--------ELQKREEIANIGESSKTE 305
             KL              K +E     E  + +
Sbjct: 88  LEKLDVHLNGEHSIAAQVKAQEQRKSTERRRRQ 120


>gi|47095782|ref|ZP_00233387.1| ABC transporter, ATP-binding protein [Listeria monocytogenes str.
           1/2a F6854]
 gi|224498481|ref|ZP_03666830.1| hypothetical protein LmonF1_01814 [Listeria monocytogenes Finland
           1988]
 gi|254899229|ref|ZP_05259153.1| hypothetical protein LmonJ_05434 [Listeria monocytogenes J0161]
 gi|254912630|ref|ZP_05262642.1| ABC transporter [Listeria monocytogenes J2818]
 gi|254936957|ref|ZP_05268654.1| ABC transporter [Listeria monocytogenes F6900]
 gi|47015786|gb|EAL06714.1| ABC transporter, ATP-binding protein [Listeria monocytogenes str.
           1/2a F6854]
 gi|258609559|gb|EEW22167.1| ABC transporter [Listeria monocytogenes F6900]
 gi|293590624|gb|EFF98958.1| ABC transporter [Listeria monocytogenes J2818]
          Length = 650

 Score = 40.2 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 8/70 (11%), Positives = 30/70 (42%), Gaps = 6/70 (8%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFI 59
            R+L  +      +   ++++ L  +  +P ++Q+  ++  + +E    +   +  +   
Sbjct: 583 KRKLEEIEKSM--EETDEKIAELELQLTNPEVFQDHEKSLEITQELDAVKADGEKLMEEW 640

Query: 60  KEIQDRLCDN 69
           ++I + L   
Sbjct: 641 EQISEELESI 650


>gi|116333264|ref|YP_794791.1| ABC transporter ATPase [Lactobacillus brevis ATCC 367]
 gi|116098611|gb|ABJ63760.1| ATPase component of ABC transporter with duplicated ATPase domains
           [Lactobacillus brevis ATCC 367]
          Length = 650

 Score = 40.2 bits (92), Expect = 0.50,   Method: Composition-based stats.
 Identities = 8/56 (14%), Positives = 18/56 (32%), Gaps = 1/56 (1%)

Query: 8   NCLGGLF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           N +  +F +      R+  L  +  DP +  +  + + +      L    S     
Sbjct: 85  NEMLSVFAEVRAMENRIHDLEQQMSDPTVIADTEQFQQISAAYDQLQQDFSDHNGY 140


>gi|194882555|ref|XP_001975376.1| GG20592 [Drosophila erecta]
 gi|190658563|gb|EDV55776.1| GG20592 [Drosophila erecta]
          Length = 148

 Score = 40.2 bits (92), Expect = 0.51,   Method: Composition-based stats.
 Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 8/93 (8%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
             + ESD      R SG GGQ VN T + V + H+PT + V+C   R   KN+ +A  +L
Sbjct: 28  PALQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHRLASKNRVEARKLL 87

Query: 281 RAKLYELE--------LQKREEIANIGESSKTE 305
             KL              K +E     E  + +
Sbjct: 88  LEKLDVHLNGEHSIATQVKAQEQRKSTERRRRQ 120


>gi|13476570|ref|NP_108140.1| ABC transporter, ATP-binding component [Mesorhizobium loti
           MAFF303099]
 gi|14027332|dbj|BAB53601.1| ABC transporter, ATP-binding component [Mesorhizobium loti
           MAFF303099]
          Length = 625

 Score = 40.2 bits (92), Expect = 0.51,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 17  DNAVQRLSFLNTKTEDPHLW-QNVIEAKMLMRERQHLDNAISFIKE 61
           D   +R+  +  +  +P ++ ++   A  L +ER  L   ++  +E
Sbjct: 565 DRIRKRIDGIEDELANPAIYEKDPSTATRLAKERSQLAQTLAGHEE 610


>gi|319654658|ref|ZP_08008738.1| ABC transporter ATP-binding protein uup [Bacillus sp. 2_A_57_CT2]
 gi|317393652|gb|EFV74410.1| ABC transporter ATP-binding protein uup [Bacillus sp. 2_A_57_CT2]
          Length = 640

 Score = 40.2 bits (92), Expect = 0.51,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 15/38 (39%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53
                ++L  L  +  DP +  N    + +++E   L 
Sbjct: 94  LQKQEKQLRSLEEQMADPDILNNSDAYERILKEYDKLQ 131


>gi|193599082|ref|XP_001946758.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
           mitochondrial-like isoform 1 [Acyrthosiphon pisum]
 gi|328703300|ref|XP_003242163.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
           mitochondrial-like [Acyrthosiphon pisum]
 gi|328703303|ref|XP_003242164.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
           mitochondrial-like [Acyrthosiphon pisum]
          Length = 150

 Score = 40.2 bits (92), Expect = 0.51,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 3/91 (3%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
             I+E++      + SG GG  VN   + V + H PTG+V++C + R    N+  A   L
Sbjct: 39  PIINENELEEMFVKGSGPGGSAVNKNANCVVLKHKPTGIVIKCHESRCVEDNRKMAREKL 98

Query: 281 RAKLYELELQK---REEIANIGESSKTEIGW 308
             KL  +E        +   I E    +  W
Sbjct: 99  AIKLDVIENGNNSVEAQKKAIIEKKNAQKEW 129


>gi|212703970|ref|ZP_03312098.1| hypothetical protein DESPIG_02023 [Desulfovibrio piger ATCC 29098]
 gi|212672673|gb|EEB33156.1| hypothetical protein DESPIG_02023 [Desulfovibrio piger ATCC 29098]
          Length = 668

 Score = 40.2 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++   L G  + + A+   S + T   DP ++ +   +  L++    L +    + E 
Sbjct: 586 LQQKYAALEG--ELEKAMNEQSDVETLLADPAVYADGARSTELLKRFNDLRDLTERLMED 643

Query: 63  QDRLCDNLILL 73
              L + +  +
Sbjct: 644 MAALEEQIAAI 654


>gi|301165780|emb|CBW25352.1| putative ABC transporter ATP-binding protein [Bacteriovorax marinus
           SJ]
          Length = 614

 Score = 40.2 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 8/73 (10%), Positives = 27/73 (36%), Gaps = 3/73 (4%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS-FIKE 61
           L ++++ L    D     +++  +N +  +     +  +   L R    L   +    +E
Sbjct: 533 LKKRMDELES--DIFAKEEKIDEINDQMLEASSSGDNKKISELSRNLGVLQKLLDIEYEE 590

Query: 62  IQDRLCDNLILLE 74
           +      +  +++
Sbjct: 591 LSTITDKHEEIIQ 603


>gi|254500775|ref|ZP_05112926.1| ABC transporter, ATP-binding protein [Labrenzia alexandrii DFL-11]
 gi|222436846|gb|EEE43525.1| ABC transporter, ATP-binding protein [Labrenzia alexandrii DFL-11]
          Length = 603

 Score = 40.2 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 20/58 (34%), Gaps = 1/58 (1%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLW-QNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
           D +    +L  L +   DP L+ +N  +   L  +   L      ++E    L     
Sbjct: 545 DIEKIEAQLEKLQSDMNDPELYAKNPDKFAKLSAQITDLSTKKDAMEEQWLELEMLNE 602


>gi|153006316|ref|YP_001380641.1| class I peptide chain release factor [Anaeromyxobacter sp. Fw109-5]
 gi|152029889|gb|ABS27657.1| Class I peptide chain release factor [Anaeromyxobacter sp. Fw109-5]
          Length = 122

 Score = 40.2 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 32/96 (33%), Positives = 40/96 (41%), Gaps = 14/96 (14%)

Query: 228 CRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
           C    +   G GGQH N T+SAVR+ H PTGV V   + RSQ +N+  A   LR +L  L
Sbjct: 25  CEETFFVGGGPGGQHRNKTESAVRLVHRPTGVTVTATERRSQLQNREAALARLRERLGPL 84

Query: 288 EL--------------QKREEIANIGESSKTEIGWG 309
                           Q+R   A      K     G
Sbjct: 85  AHRPKARRPTRPTRGSQERRIAAKKRRGEKKAGRRG 120


>gi|317490594|ref|ZP_07949067.1| RF-1 domain-containing protein [Eggerthella sp. 1_3_56FAA]
 gi|325831509|ref|ZP_08164763.1| peptidyl-tRNA hydrolase domain protein [Eggerthella sp. HGA1]
 gi|316910296|gb|EFV31932.1| RF-1 domain-containing protein [Eggerthella sp. 1_3_56FAA]
 gi|325486763|gb|EGC89211.1| peptidyl-tRNA hydrolase domain protein [Eggerthella sp. HGA1]
          Length = 124

 Score = 40.2 bits (92), Expect = 0.54,   Method: Composition-based stats.
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 15/98 (15%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            DC +  +RASG GGQ VNTTDSAVR+TH+P+G+    ++ RSQ +N+      LR +  
Sbjct: 24  RDCDVQAFRASGPGGQCVNTTDSAVRMTHVPSGMTATSRESRSQFRNRQLCLQKLRDRFA 83

Query: 286 ELE---------------LQKREEIANIGESSKTEIGW 308
                              ++R         +K + G 
Sbjct: 84  REAVPPKARRATKATRASKERRLAQKRRRSQTKAQRGR 121


>gi|260469584|ref|ZP_05813749.1| ABC transporter related protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259028610|gb|EEW29921.1| ABC transporter related protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 625

 Score = 40.2 bits (92), Expect = 0.55,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 17  DNAVQRLSFLNTKTEDPHLW-QNVIEAKMLMRERQHLDNAISFIKE 61
           D   +R+  +  +  +P ++ ++   A  L +ER  L   ++  +E
Sbjct: 565 DRIRKRIDGIEDELANPAIYEKDPSTATRLAKERSQLAQTLAGHEE 610


>gi|253699344|ref|YP_003020533.1| ABC transporter [Geobacter sp. M21]
 gi|251774194|gb|ACT16775.1| ABC transporter related protein [Geobacter sp. M21]
          Length = 648

 Score = 40.2 bits (92), Expect = 0.56,   Method: Composition-based stats.
 Identities = 6/51 (11%), Positives = 14/51 (27%), Gaps = 1/51 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL-DNAISFIKEIQDR 65
                  L+ L      P  + +   A++       L +   S  +  +  
Sbjct: 598 IATKEGELAELEQAMAKPDFFSDHEAARIAGERHAQLTEEIASLYQAWEAA 648


>gi|46581455|ref|YP_012263.1| ABC transporter ATP-binding protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46450877|gb|AAS97523.1| ABC transporter, ATP-binding protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311235108|gb|ADP87962.1| ABC transporter related protein [Desulfovibrio vulgaris RCH1]
          Length = 659

 Score = 40.2 bits (92), Expect = 0.56,   Method: Composition-based stats.
 Identities = 7/61 (11%), Positives = 23/61 (37%), Gaps = 4/61 (6%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL----DNAISFIKEIQDRLCDNL 70
           D +  +     +  +  DP ++ +   A  L++    L    +  +  + E++  + +  
Sbjct: 589 DLEKLLDEQGTVEAELADPDVYADGARASALLQRFGELQAASEKLLERMGELEPVIAELE 648

Query: 71  I 71
            
Sbjct: 649 A 649


>gi|310792386|gb|EFQ27913.1| RF-1 domain-containing protein [Glomerella graminicola M1.001]
          Length = 193

 Score = 39.8 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 28/75 (37%), Positives = 41/75 (54%)

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
                      +S+      + SG GGQ +N T SAV++ HIPTGVVV+ Q  RS+ +N+
Sbjct: 39  HEMPPRPKPPPDSEIEESYLKGSGPGGQKINKTSSAVQLKHIPTGVVVKSQATRSRTQNR 98

Query: 274 AQAWNMLRAKLYELE 288
             A  +L  KL +L+
Sbjct: 99  KIAREILAQKLDDLQ 113


>gi|126651230|ref|ZP_01723440.1| ABC transporter (ATP-binding protein) [Bacillus sp. B14905]
 gi|126592068|gb|EAZ86134.1| ABC transporter (ATP-binding protein) [Bacillus sp. B14905]
          Length = 551

 Score = 39.8 bits (91), Expect = 0.57,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 17/48 (35%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA 55
             LG   +   A + L  L  +  +P    N  + + +M+      + 
Sbjct: 95  EMLGAFTELQEAEKELRELEMQMGEPSCINNPEKLEQVMKIYASKSDW 142


>gi|120601374|ref|YP_965774.1| ABC transporter [Desulfovibrio vulgaris DP4]
 gi|120561603|gb|ABM27347.1| ABC transporter related protein [Desulfovibrio vulgaris DP4]
          Length = 659

 Score = 39.8 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 7/61 (11%), Positives = 23/61 (37%), Gaps = 4/61 (6%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL----DNAISFIKEIQDRLCDNL 70
           D +  +     +  +  DP ++ +   A  L++    L    +  +  + E++  + +  
Sbjct: 589 DLEKLLDEQGTVEAELADPDVYADGARASALLQRFGELQAASEKLLERMGELEPVIAELE 648

Query: 71  I 71
            
Sbjct: 649 A 649


>gi|116328132|ref|YP_797852.1| peptidyl-tRNA hydrolase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331415|ref|YP_801133.1| peptidyl-tRNA hydrolase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116120876|gb|ABJ78919.1| Peptidyl-tRNA hydrolase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125104|gb|ABJ76375.1| Peptidyl-tRNA hydrolase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 154

 Score = 39.8 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 4/93 (4%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
              +E+ E++      R+ G GGQ+VN   +AV + H PTG+ V+C   R+Q  N+ +A 
Sbjct: 19  MDVLEVKENELEESFTRSGGKGGQNVNKVSTAVHLKHKPTGIEVKCSLYRTQGLNRYKAR 78

Query: 278 NMLRAKLYELELQKR----EEIANIGESSKTEI 306
            +L  K+ E   +K+    +E  N   + + + 
Sbjct: 79  AILCEKIQEENRKKQGTVSDERKNTIRNKQKDA 111


>gi|251795070|ref|YP_003009801.1| ABC transporter [Paenibacillus sp. JDR-2]
 gi|247542696|gb|ACS99714.1| ABC transporter related [Paenibacillus sp. JDR-2]
          Length = 642

 Score = 39.8 bits (91), Expect = 0.58,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 17/53 (32%), Gaps = 1/53 (1%)

Query: 4   SRQLNCLGGLF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNA 55
              +  +  +F     A Q L  L  +  DP L  N    + ++       + 
Sbjct: 80  RTIIEEMRAVFSHLIEAEQELRELERQIADPALHDNPKRYEDVLDRYSRKSDW 132


>gi|302670497|ref|YP_003830457.1| ABC transporter ATP-binding protein [Butyrivibrio proteoclasticus
           B316]
 gi|302394970|gb|ADL33875.1| ABC transporter ATP-binding protein [Butyrivibrio proteoclasticus
           B316]
          Length = 692

 Score = 39.8 bits (91), Expect = 0.59,   Method: Composition-based stats.
 Identities = 8/58 (13%), Positives = 21/58 (36%), Gaps = 1/58 (1%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKEIQDRLCDNLI 71
           D      R   +  +  DP +  ++ + + L  E+  + + +S    E +    +   
Sbjct: 634 DISKLEGRDGEITEQLSDPSVGTDLAKLRKLTDEQTEIQDKLSSLYDEWEKISSELSE 691


>gi|50304901|ref|XP_452406.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49641539|emb|CAH01257.1| KLLA0C04642p [Kluyveromyces lactis]
          Length = 168

 Score = 39.8 bits (91), Expect = 0.59,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 11/84 (13%)

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE---- 288
           +   G GGQ +N  +S V++ H+PTG+VV CQ  RS+ +N+  A   L  +L + E    
Sbjct: 54  HGGRGPGGQKINKCNSKVQLRHVPTGIVVDCQATRSRDQNRKIAREKLALRLAQWENGDQ 113

Query: 289 -------LQKREEIANIGESSKTE 305
                    + E+ +   +  K +
Sbjct: 114 PIERELAKIQWEQQSKRSKERKAK 137


>gi|86159828|ref|YP_466613.1| class I peptide chain release factor [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85776339|gb|ABC83176.1| Class I peptide chain release factor [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 123

 Score = 39.8 bits (91), Expect = 0.59,   Method: Composition-based stats.
 Identities = 25/64 (39%), Positives = 35/64 (54%)

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           +C    +   G GGQH N T+S VR+ H PT + V   + RSQ +N+  A   LRA+L  
Sbjct: 25  ECDESFFVGGGPGGQHRNKTESGVRLVHRPTEITVTATERRSQLQNRGAALERLRARLQP 84

Query: 287 LELQ 290
           L  +
Sbjct: 85  LAHR 88


>gi|315283123|ref|ZP_07871384.1| ABC transporter, ATP-binding protein [Listeria marthii FSL S4-120]
 gi|313613225|gb|EFR87108.1| ABC transporter, ATP-binding protein [Listeria marthii FSL S4-120]
          Length = 650

 Score = 39.8 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 9/68 (13%), Positives = 28/68 (41%), Gaps = 6/68 (8%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFI 59
            R+L  +      +   ++++ L  +   P ++Q+  +A  + +E    +   +  +   
Sbjct: 583 KRKLEEVEQAM--EETEEKIAELELQLTKPEVFQDHEKALEITQELDAVKADGEKLMEEW 640

Query: 60  KEIQDRLC 67
           + I + L 
Sbjct: 641 ETISEELE 648


>gi|289613196|emb|CBI59790.1| unnamed protein product [Sordaria macrospora]
          Length = 250

 Score = 39.8 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 25/69 (36%), Positives = 42/69 (60%)

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
                 ++ E +      + SG GGQ +N T+SAV++ HIPT +V++CQ+ RS+ +N+  
Sbjct: 76  QMPPRPKLPEDELEEVYLKGSGPGGQKINKTNSAVQLRHIPTNIVIKCQETRSRTQNRKL 135

Query: 276 AWNMLRAKL 284
           A  +L AK+
Sbjct: 136 AREILAAKV 144


>gi|138893891|ref|YP_001124344.1| ABC transporter ATP-binding protein Uup [Geobacillus
           thermodenitrificans NG80-2]
 gi|134265404|gb|ABO65599.1| ABC transporter ATP-binding protein Uup [Geobacillus
           thermodenitrificans NG80-2]
          Length = 643

 Score = 39.8 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 5/56 (8%), Positives = 26/56 (46%), Gaps = 4/56 (7%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFIKEIQDRL 66
           + +    +++ +  +  DP ++ +    + L +E    ++ ++  ++  +++   L
Sbjct: 588 EIETLEAQIAEVEQQLCDPSIYGDYETVQRLSQENEERKRQVEKLLAEWEQLYSSL 643



 Score = 38.6 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 5/41 (12%), Positives = 16/41 (39%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58
              ++L+ L ++  DP +  +    + +++    L      
Sbjct: 96  AIEKQLAALGSQLGDPDVLADPARYEKILKAYDELQEQYKE 136


>gi|192362423|ref|YP_001984000.1| ABC transporter ATP-binding protein [Cellvibrio japonicus Ueda107]
 gi|190688588|gb|ACE86266.1| ABC transporter, ATP-binding protein [Cellvibrio japonicus Ueda107]
          Length = 630

 Score = 39.8 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 29/72 (40%), Gaps = 4/72 (5%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEA--KMLMRERQHLDNAISFIK 60
           L+ +L  L      +   +RL  + +   D  ++ +  +A  + L+ E+  L   +   +
Sbjct: 558 LANKLKNLEA--QLEKLQKRLGDIESLLGDTSIYDDKNKATLQELLAEQSQLTAQLQETE 615

Query: 61  EIQDRLCDNLIL 72
           E    + + L  
Sbjct: 616 ENWLLISEELEA 627


>gi|194757281|ref|XP_001960893.1| GF13589 [Drosophila ananassae]
 gi|190622191|gb|EDV37715.1| GF13589 [Drosophila ananassae]
          Length = 141

 Score = 39.8 bits (91), Expect = 0.61,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 8/107 (7%)

Query: 207 SSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQE 266
                   +D S    + ESD      R SG GGQ VN T + V + H+PT + ++C   
Sbjct: 16  LRCKSTAHLDYSRYPTLQESDIEETFTRGSGPGGQAVNKTSNCVFLRHLPTNITIKCHTH 75

Query: 267 RSQHKNKAQAWNMLRAKLYEL--------ELQKREEIANIGESSKTE 305
           R   KN+ +A  +L  KL              K +E     E  + +
Sbjct: 76  RLASKNRVEARKLLLEKLDAHLNGENSIAAQIKVQEQRKSTERRRRQ 122


>gi|325110517|ref|YP_004271585.1| class I peptide chain release factor [Planctomyces brasiliensis DSM
           5305]
 gi|324970785|gb|ADY61563.1| Class I peptide chain release factor [Planctomyces brasiliensis DSM
           5305]
          Length = 168

 Score = 39.8 bits (91), Expect = 0.63,   Method: Composition-based stats.
 Identities = 28/72 (38%), Positives = 39/72 (54%)

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
           +    +  E   S+C +   R SG GGQH N  ++A+RI H PTGV  Q  + RSQ +N+
Sbjct: 1   MHPTELTDEKLLSECDVTRQRRSGPGGQHRNKVETAIRIEHRPTGVTGQASERRSQEENR 60

Query: 274 AQAWNMLRAKLY 285
             A   LR +L 
Sbjct: 61  KVALFRLRVELA 72


>gi|254826171|ref|ZP_05231172.1| ABC transporter [Listeria monocytogenes FSL J1-194]
 gi|293595411|gb|EFG03172.1| ABC transporter [Listeria monocytogenes FSL J1-194]
          Length = 650

 Score = 39.8 bits (91), Expect = 0.64,   Method: Composition-based stats.
 Identities = 9/68 (13%), Positives = 30/68 (44%), Gaps = 6/68 (8%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFI 59
            R+L  +      +   ++++ L  +  +P ++Q+  +A  + +E    +   +  +   
Sbjct: 583 KRKLEEVEKSM--EATDEKIAELELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEW 640

Query: 60  KEIQDRLC 67
           ++I + L 
Sbjct: 641 EQISEELE 648


>gi|189425837|ref|YP_001953014.1| class I peptide chain release factor [Geobacter lovleyi SZ]
 gi|189422096|gb|ACD96494.1| Class I peptide chain release factor [Geobacter lovleyi SZ]
          Length = 124

 Score = 39.8 bits (91), Expect = 0.64,   Method: Composition-based stats.
 Identities = 28/78 (35%), Positives = 41/78 (52%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           + E +      RASG GGQH+N T SAV++ H+PTG+  +C +ERSQ  N+  A   L  
Sbjct: 25  VKEEELEEQFVRASGRGGQHLNKTSSAVQVRHLPTGIEARCGRERSQSLNRFLARRELLE 84

Query: 283 KLYELELQKREEIANIGE 300
           K+        E+   +  
Sbjct: 85  KIARHLGLVTEQDRELAR 102


>gi|221101663|ref|XP_002163246.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 159

 Score = 39.8 bits (91), Expect = 0.65,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 3/106 (2%)

Query: 211 VYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           +  V   S  + + ESD +    + SG GGQ +N T + V + H  TG++V+CQ+ RS  
Sbjct: 44  IEAVEKKSDTVILKESDFQEKFIKGSGPGGQKINKTSNCVELKHDATGIIVKCQETRSLE 103

Query: 271 KNKAQAWNMLRAKLYELE---LQKREEIANIGESSKTEIGWGRQIR 313
           +N+  A   L  KL  L      K+++  +  +  +  I   R++R
Sbjct: 104 RNRVIARERLLEKLRFLYNPSESKQQQRLDAKQKQEKNIERKRRLR 149


>gi|261196175|ref|XP_002624491.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
 gi|239587624|gb|EEQ70267.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
          Length = 196

 Score = 39.8 bits (91), Expect = 0.65,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 1/120 (0%)

Query: 190 LVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSA 249
                 +   +     FS      V       ++  S+      + +G GGQ +N T+SA
Sbjct: 4   WRIRPQWRQPNGILRLFSHCCRLFVKQMPPRPKLDPSEVTGSYLKGTGPGGQAINKTNSA 63

Query: 250 VRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-YELELQKREEIANIGESSKTEIGW 308
           V++ H PTG+VV+ Q  RS+ +N+  A  +L  K+  +L+ +K           K +   
Sbjct: 64  VQLIHKPTGIVVKSQATRSRTQNQKIAMGILAEKVELQLKGEKSRAAIKAETKRKRKASR 123


>gi|195121186|ref|XP_002005101.1| GI19248 [Drosophila mojavensis]
 gi|193910169|gb|EDW09036.1| GI19248 [Drosophila mojavensis]
          Length = 141

 Score = 39.8 bits (91), Expect = 0.65,   Method: Composition-based stats.
 Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 1/111 (0%)

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
                ++   +     +D S    + ESD      R SG GGQ VN T++ V + H+PTG
Sbjct: 8   AGSLSSNLCRLASNAHLDYSRYPTLQESDIEETLMRGSGPGGQAVNKTNNCVFLRHLPTG 67

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLY-ELELQKREEIANIGESSKTEIGW 308
           + V+C   R   KN+ +A  +L  KL   L  +K           K     
Sbjct: 68  ITVKCHLHRLASKNRIEARKILLEKLDVHLNGEKSIAAQQKALDQKKSTER 118


>gi|254933501|ref|ZP_05266860.1| ABC transporter [Listeria monocytogenes HPB2262]
 gi|293585065|gb|EFF97097.1| ABC transporter [Listeria monocytogenes HPB2262]
 gi|332312522|gb|EGJ25617.1| ABC transporter related protein [Listeria monocytogenes str. Scott
           A]
          Length = 650

 Score = 39.8 bits (91), Expect = 0.65,   Method: Composition-based stats.
 Identities = 9/68 (13%), Positives = 30/68 (44%), Gaps = 6/68 (8%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFI 59
            R+L  +      +   ++++ L  +  +P ++Q+  +A  + +E    +   +  +   
Sbjct: 583 KRKLEEVEKSM--EATDEKIAELELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEW 640

Query: 60  KEIQDRLC 67
           ++I + L 
Sbjct: 641 EQISEELE 648


>gi|255521638|ref|ZP_05388875.1| ABC transporter (ATP-binding protein) [Listeria monocytogenes FSL
           J1-175]
          Length = 650

 Score = 39.8 bits (91), Expect = 0.67,   Method: Composition-based stats.
 Identities = 9/68 (13%), Positives = 30/68 (44%), Gaps = 6/68 (8%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFI 59
            R+L  +      +   ++++ L  +  +P ++Q+  +A  + +E    +   +  +   
Sbjct: 583 KRKLEEVEKSM--EATDEKIAELELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEW 640

Query: 60  KEIQDRLC 67
           ++I + L 
Sbjct: 641 EQISEELE 648


>gi|157363011|ref|YP_001469778.1| peptidoglycan-binding LysM [Thermotoga lettingae TMO]
 gi|157313615|gb|ABV32714.1| Peptidoglycan-binding LysM [Thermotoga lettingae TMO]
          Length = 573

 Score = 39.8 bits (91), Expect = 0.69,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 22/56 (39%), Gaps = 2/56 (3%)

Query: 16 WDNAVQRLSFLNTKTED--PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           +   +RL  L  +        + N    + L +E   ++N +S  K++ D   + 
Sbjct: 25 LEQINRRLDELEYRIAQIEKSTYNNQKNIEKLQQEVSKINNEVSSAKKLLDEQKNL 80


>gi|325278846|ref|YP_004251388.1| ATP-binding cassette protein, ChvD family [Odoribacter splanchnicus
           DSM 20712]
 gi|324310655|gb|ADY31208.1| ATP-binding cassette protein, ChvD family [Odoribacter splanchnicus
           DSM 20712]
          Length = 562

 Score = 39.8 bits (91), Expect = 0.70,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 44/122 (36%), Gaps = 2/122 (1%)

Query: 1   MKLSRQLNCL--GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58
           ++  + +  +   G+ D  +A++    +N K  DP + +N  +   L+  +  L + I  
Sbjct: 83  LESGKTVKEIVQEGVQDIVDALKEFEEVNQKFGDPEVLENPDKLNALINRQAELQDKIDA 142

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
                        +  L    +D  +   +    +R+ L     Q   +L  +  +N   
Sbjct: 143 TDAWNLDSRLERAMDALRCPPEDQVVDTLSGGERRRVALCRLLLQQPDVLLLDEPTNHLD 202

Query: 119 LE 120
            E
Sbjct: 203 AE 204


>gi|226320895|ref|ZP_03796446.1| Peptide chain release factor 1 [Borrelia burgdorferi 29805]
 gi|226233667|gb|EEH32397.1| Peptide chain release factor 1 [Borrelia burgdorferi 29805]
          Length = 81

 Score = 39.8 bits (91), Expect = 0.70,   Method: Composition-based stats.
 Identities = 10/69 (14%), Positives = 30/69 (43%)

Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
           ++A  ++  +  K +D +L ++  +   +++E  +L+   +   E +  L        +
Sbjct: 6  LNSATSKIKLIEEKLQDINLIKDQKKYSKIIKEYTYLEKINTKKIEYEKILSQINDTKTI 65

Query: 76 ALEEDDCSI 84
            +ED   +
Sbjct: 66 LEKEDQQEM 74


>gi|78224169|ref|YP_385916.1| class I peptide chain release factor [Geobacter metallireducens
           GS-15]
 gi|78195424|gb|ABB33191.1| Class I peptide chain release factor [Geobacter metallireducens
           GS-15]
          Length = 121

 Score = 39.8 bits (91), Expect = 0.71,   Method: Composition-based stats.
 Identities = 28/75 (37%), Positives = 45/75 (60%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
            +   E+ ++E+D      R+SGAGGQHVN T + V+I H PTG+ V+C ++RSQ  N+ 
Sbjct: 17  REKMTELGVAEADLEESFVRSSGAGGQHVNKTATCVQIKHRPTGIEVKCMKDRSQSVNRF 76

Query: 275 QAWNMLRAKLYELEL 289
            A   +  ++  L+ 
Sbjct: 77  LARREILVRIERLQK 91


>gi|196251106|ref|ZP_03149786.1| ABC transporter-related protein [Geobacillus sp. G11MC16]
 gi|196209400|gb|EDY04179.1| ABC transporter-related protein [Geobacillus sp. G11MC16]
          Length = 554

 Score = 39.8 bits (91), Expect = 0.72,   Method: Composition-based stats.
 Identities = 5/56 (8%), Positives = 26/56 (46%), Gaps = 4/56 (7%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFIKEIQDRL 66
           + +    +++ +  +  DP ++ +    + L +E    ++ ++  ++  +++   L
Sbjct: 499 EIETLEAQIAEVEQQLCDPSIYGDYETVQRLSQENEERKRQVEKLLAEWEQLYSSL 554



 Score = 38.2 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 5/41 (12%), Positives = 16/41 (39%)

Query: 18 NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58
             ++L+ L ++  DP +  +    + +++    L      
Sbjct: 7  AIEKQLAALGSQLGDPDVLADPARYEKILKAYDELQEQYKE 47


>gi|256848117|ref|ZP_05553561.1| ABC transporter ATP-binding component [Lactobacillus coleohominis
           101-4-CHN]
 gi|256715177|gb|EEU30154.1| ABC transporter ATP-binding component [Lactobacillus coleohominis
           101-4-CHN]
          Length = 645

 Score = 39.8 bits (91), Expect = 0.72,   Method: Composition-based stats.
 Identities = 6/57 (10%), Positives = 17/57 (29%), Gaps = 1/57 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE-IQDRLCDNLI 71
            D    +   +  +  DP +  ++ +   L +E +     +   +E           
Sbjct: 586 LDQLQAQHDQIEQQMSDPEIATDIAKLSDLQKELEQCQTEMDQAEENWTSAAEQLEE 642


>gi|119911989|ref|XP_582998.3| PREDICTED: smoothelin-like isoform 1 [Bos taurus]
          Length = 1072

 Score = 39.8 bits (91), Expect = 0.74,   Method: Composition-based stats.
 Identities = 50/330 (15%), Positives = 89/330 (26%), Gaps = 35/330 (10%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDP------HLWQNVIEAKMLMRERQHLDNA 55
           +L   L  L    D    VQ L+  N K  D          Q+   A+ L +E + L   
Sbjct: 390 ELQATLQELS---DQQQMVQELTAENEKLADEKTLLETSFHQHRERAEQLSQENEKLMTL 446

Query: 56  IS-------------FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           +               I E++ +  + L       E+      Q T       +      
Sbjct: 447 LQERVKGEEPGAQEGKILELEQKCTEILEQGRFEREKLLSIQQQLTCRLRAVEEEHRSAL 506

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           +    L          LE+   +GG  ++  A   L +     E    +           
Sbjct: 507 ELVRHLQEVNGELTTRLELEQHSGGPTAEIPAARQLPVEGLQVENGSLQASLENEEQKTG 566

Query: 163 A---------GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
                     G     +L         L+      R   +  +    R  +  + +    
Sbjct: 567 GASPLGPMAEGCDVQEMLTVARAEKDQLEQSCSELRQELLKAHGEVKRVSSLLAKVEKDY 626

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
                I    +E   R        A        D    I      +  Q +Q R+   + 
Sbjct: 627 SYLKEICDHQAEQLSRTSLKLQEKASESDAEIKDMKETIF----ELEDQVEQHRAVKLHN 682

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSK 303
            Q  + L + + +LE QK +    +   +K
Sbjct: 683 NQLISELESSVMKLEEQKSDLERQLKTLTK 712


>gi|297486864|ref|XP_002695865.1| PREDICTED: smoothelin-like [Bos taurus]
 gi|296476629|gb|DAA18744.1| smoothelin-like [Bos taurus]
          Length = 1072

 Score = 39.8 bits (91), Expect = 0.74,   Method: Composition-based stats.
 Identities = 50/330 (15%), Positives = 89/330 (26%), Gaps = 35/330 (10%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDP------HLWQNVIEAKMLMRERQHLDNA 55
           +L   L  L    D    VQ L+  N K  D          Q+   A+ L +E + L   
Sbjct: 390 ELQATLQELS---DQQQMVQELTAENEKLADEKTLLETSFHQHRERAEQLSQENEKLMTL 446

Query: 56  IS-------------FIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYK 102
           +               I E++ +  + L       E+      Q T       +      
Sbjct: 447 LQERVKGEEPGAQEGKILELEQKCTEILEQGRFEREKLLSIQQQLTCRLRAVEEEHRSAL 506

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           +    L          LE+   +GG  ++  A   L +     E    +           
Sbjct: 507 ELVRHLQEVNGELTTRLELEQHSGGPTAEIPAARQLPVEGLQVENGSLQASLENEEQKTG 566

Query: 163 A---------GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYP 213
                     G     +L         L+      R   +  +    R  +  + +    
Sbjct: 567 GASPLGPMAEGCDVQEMLTVARAEKDQLEQSCSELRQELLKAHGEVKRVSSLLAKVEKDY 626

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
                I    +E   R        A        D    I      +  Q +Q R+   + 
Sbjct: 627 SYLKEICDHQAEQLSRTSLKLQEKASESDAEIKDMKETIF----ELEDQVEQHRAVKLHN 682

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSK 303
            Q  + L + + +LE QK +    +   +K
Sbjct: 683 NQLISELESSVMKLEEQKSDLERQLKTLTK 712


>gi|71022895|ref|XP_761677.1| hypothetical protein UM05530.1 [Ustilago maydis 521]
 gi|46101154|gb|EAK86387.1| hypothetical protein UM05530.1 [Ustilago maydis 521]
          Length = 713

 Score = 39.8 bits (91), Expect = 0.74,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 37/68 (54%)

Query: 220 EIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNM 279
            + + E D      R SG GGQ +N   + V++TH+PTG  V CQ+ RS+ +N+  A   
Sbjct: 597 PLTLDEKDLAEKFIRGSGPGGQAINKLSTNVQLTHLPTGTKVTCQETRSRDRNRELARRR 656

Query: 280 LRAKLYEL 287
           +   L +L
Sbjct: 657 MSLTLEKL 664


>gi|239614579|gb|EEQ91566.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3]
          Length = 196

 Score = 39.4 bits (90), Expect = 0.75,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 1/104 (0%)

Query: 206 FSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQ 265
           FS      V       ++  S+      + +G GGQ +N T+SAV++ H PTG+VV+ Q 
Sbjct: 20  FSHCCRLFVKQMPPRPKLDPSEVTGSYLKGTGPGGQAINKTNSAVQLIHKPTGIVVKSQA 79

Query: 266 ERSQHKNKAQAWNMLRAKL-YELELQKREEIANIGESSKTEIGW 308
            RS+ +N+  A  +L  K+  +L+ +K           K +   
Sbjct: 80  TRSRTQNQKIAMGILAEKVELQLKGEKSRAAIKAETKRKRKASR 123


>gi|332373588|gb|AEE61935.1| unknown [Dendroctonus ponderosae]
          Length = 138

 Score = 39.4 bits (90), Expect = 0.76,   Method: Composition-based stats.
 Identities = 34/100 (34%), Positives = 47/100 (47%)

Query: 214 VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNK 273
            +D S    ++E D      + SG GGQ V+ T S + + HIPTG+VV+CQ+ RS  +NK
Sbjct: 22  HIDYSQVPALNEQDLEEKQVKGSGPGGQKVSKTSSCIVLKHIPTGIVVKCQETRSVLQNK 81

Query: 274 AQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
             A   L  KL      +    A I      + G   Q R
Sbjct: 82  KIARLHLITKLDNTINGENSVEAQIKRLENKKRGCNEQKR 121


>gi|254853990|ref|ZP_05243338.1| ABC transporter [Listeria monocytogenes FSL R2-503]
 gi|300765509|ref|ZP_07075490.1| ABC transporter, ATP-binding protein [Listeria monocytogenes FSL
           N1-017]
 gi|258607379|gb|EEW19987.1| ABC transporter [Listeria monocytogenes FSL R2-503]
 gi|300513820|gb|EFK40886.1| ABC transporter, ATP-binding protein [Listeria monocytogenes FSL
           N1-017]
          Length = 650

 Score = 39.4 bits (90), Expect = 0.77,   Method: Composition-based stats.
 Identities = 9/68 (13%), Positives = 30/68 (44%), Gaps = 6/68 (8%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFI 59
            R+L  +      +   ++++ L  +  +P ++Q+  +A  + +E    +   +  +   
Sbjct: 583 KRKLEEVEKSM--EATDKKIAELELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEW 640

Query: 60  KEIQDRLC 67
           ++I + L 
Sbjct: 641 EQISEELE 648


>gi|303248994|ref|ZP_07335239.1| ABC transporter related protein [Desulfovibrio fructosovorans JJ]
 gi|302489580|gb|EFL49520.1| ABC transporter related protein [Desulfovibrio fructosovorans JJ]
          Length = 665

 Score = 39.4 bits (90), Expect = 0.78,   Method: Composition-based stats.
 Identities = 7/61 (11%), Positives = 22/61 (36%), Gaps = 4/61 (6%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL----DNAISFIKEIQDRLCDNL 70
           + +  + + S +     DP  +        L +E   L    +  ++ +  +++ + D  
Sbjct: 596 ELETLLAKQSEVEAVMADPETYAKRELFSQLSKEYGTLSHAAEELLARMAVLEEEIADLE 655

Query: 71  I 71
            
Sbjct: 656 A 656


>gi|254992571|ref|ZP_05274761.1| ABC transporter (ATP-binding protein) [Listeria monocytogenes FSL
           J2-064]
          Length = 650

 Score = 39.4 bits (90), Expect = 0.78,   Method: Composition-based stats.
 Identities = 9/68 (13%), Positives = 30/68 (44%), Gaps = 6/68 (8%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFI 59
            R+L  +      +   ++++ L  +  +P ++Q+  +A  + +E    +   +  +   
Sbjct: 583 KRKLEEVEKSM--EATDKKIAELELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEW 640

Query: 60  KEIQDRLC 67
           ++I + L 
Sbjct: 641 EQISEELE 648


>gi|195382982|ref|XP_002050205.1| GJ20325 [Drosophila virilis]
 gi|195404316|ref|XP_002060447.1| GJ15534 [Drosophila virilis]
 gi|194145002|gb|EDW61398.1| GJ20325 [Drosophila virilis]
 gi|194156312|gb|EDW71496.1| GJ15534 [Drosophila virilis]
          Length = 142

 Score = 39.4 bits (90), Expect = 0.78,   Method: Composition-based stats.
 Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 2/108 (1%)

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTG 258
                ++   +     +D S    + ESD      R SG GGQ VN T++ V + H+PTG
Sbjct: 8   AGALSSNLCRLASTAHLDYSRYPSLQESDIEETLLRGSGPGGQAVNKTNNCVFLRHLPTG 67

Query: 259 VVVQCQQERSQHKNKAQAWNMLRAKLYELE--LQKREEIANIGESSKT 304
           + V+C   R   KN+ +A  +L  KL       Q       + +  K+
Sbjct: 68  ITVKCHLHRLASKNRIEARKILLDKLDAHLNGEQSIAAQQKVLDQKKS 115


>gi|46908309|ref|YP_014698.1| ABC transporter ATP-binding protein [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|46881580|gb|AAT04875.1| ABC transporter, ATP-binding protein [Listeria monocytogenes
           serotype 4b str. F2365]
          Length = 650

 Score = 39.4 bits (90), Expect = 0.78,   Method: Composition-based stats.
 Identities = 9/68 (13%), Positives = 30/68 (44%), Gaps = 6/68 (8%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFI 59
            R+L  +      +   ++++ L  +  +P ++Q+  +A  + +E    +   +  +   
Sbjct: 583 KRKLEEVEKSM--EATDKKIAELELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEW 640

Query: 60  KEIQDRLC 67
           ++I + L 
Sbjct: 641 EQISEELE 648


>gi|47091741|ref|ZP_00229536.1| ABC transporter, ATP-binding protein [Listeria monocytogenes str.
           4b H7858]
 gi|226224679|ref|YP_002758786.1| ABC transporter (ATP-binding protein) [Listeria monocytogenes
           Clip81459]
 gi|47019752|gb|EAL10490.1| ABC transporter, ATP-binding protein [Listeria monocytogenes str.
           4b H7858]
 gi|225877141|emb|CAS05853.1| Putative ABC transporter (ATP-binding protein) [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
          Length = 650

 Score = 39.4 bits (90), Expect = 0.78,   Method: Composition-based stats.
 Identities = 9/68 (13%), Positives = 30/68 (44%), Gaps = 6/68 (8%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFI 59
            R+L  +      +   ++++ L  +  +P ++Q+  +A  + +E    +   +  +   
Sbjct: 583 KRKLEEVEKSM--EATDKKIAELELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEW 640

Query: 60  KEIQDRLC 67
           ++I + L 
Sbjct: 641 EQISEELE 648


>gi|297582875|ref|YP_003698655.1| ABC transporter-like protein [Bacillus selenitireducens MLS10]
 gi|297141332|gb|ADH98089.1| ABC transporter related protein [Bacillus selenitireducens MLS10]
          Length = 642

 Score = 39.4 bits (90), Expect = 0.79,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 29/64 (45%), Gaps = 2/64 (3%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
           R++  +      +    R+  + ++   P ++Q+  E+  L  E + L +A+  + +  +
Sbjct: 581 RRIEEIEST--VEGHESRVEEIESELIKPEVFQDHEESARLQTELESLQDALETLMDEWE 638

Query: 65  RLCD 68
            L D
Sbjct: 639 ALQD 642


>gi|108805097|ref|YP_645034.1| ABC transporter-like protein [Rubrobacter xylanophilus DSM 9941]
 gi|108766340|gb|ABG05222.1| ABC transporter related [Rubrobacter xylanophilus DSM 9941]
          Length = 613

 Score = 39.4 bits (90), Expect = 0.81,   Method: Composition-based stats.
 Identities = 8/57 (14%), Positives = 26/57 (45%), Gaps = 2/57 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI 59
           L+ +L  + G  + +   +R++ L  +     L+ +   ++ ++ E + L   +  +
Sbjct: 543 LAARLVAVEG--EIEAVERRINRLEKELATADLYADGRRSREVVLEHRELKGVLERL 597


>gi|328791281|ref|XP_003251540.1| PREDICTED: peptide chain release factor 2-like [Apis mellifera]
          Length = 178

 Score = 39.4 bits (90), Expect = 0.82,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 42/85 (49%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
            ++ ESD +    +  G GGQ  N T +A+ + H PTG+VV+C + RS  +N+  A  +L
Sbjct: 69  PKLEESDLQEQFVKGCGPGGQATNKTSNAIVLKHKPTGLVVKCHETRSLDQNRKIARKIL 128

Query: 281 RAKLYELELQKREEIANIGESSKTE 305
             +L  L   +        +  K +
Sbjct: 129 LTRLDNLVNDQNSLQNQKEQLMKRD 153


>gi|260947746|ref|XP_002618170.1| hypothetical protein CLUG_01629 [Clavispora lusitaniae ATCC 42720]
 gi|238848042|gb|EEQ37506.1| hypothetical protein CLUG_01629 [Clavispora lusitaniae ATCC 42720]
          Length = 180

 Score = 39.4 bits (90), Expect = 0.83,   Method: Composition-based stats.
 Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 1/74 (1%)

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
               G GGQ +N ++S V++TH PTG+VV CQ  RSQ +N+ +A  +L  KL EL+    
Sbjct: 60  KGGRGPGGQKINKSNSKVQLTHKPTGIVVTCQYSRSQEQNRKKAREILALKLEELQ-DPE 118

Query: 293 EEIANIGESSKTEI 306
                I    K+ +
Sbjct: 119 NSRTAILNKRKSMV 132


>gi|224047486|ref|XP_002199585.1| PREDICTED: coiled-coil domain containing 88A [Taeniopygia guttata]
          Length = 1884

 Score = 39.4 bits (90), Expect = 0.83,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 42/136 (30%), Gaps = 3/136 (2%)

Query: 17  DNAVQRLSFLNTKTEDP--HLWQNVIEAKMLMRERQHLDNAISFIKE-IQDRLCDNLILL 73
               ++L  L  +       L  +  ++K LM+E+  L+  +  ++E  + ++       
Sbjct: 500 QRLSKKLEELENEISQEKQSLQNSQNQSKDLMKEKAQLEKTLEALRENSERQIKLLEQEN 559

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E   +       +       R+K   +  +       E  S    LE        E + +
Sbjct: 560 EHLNQTVASLRQRSEISAEARMKEIEKENKILHESIKETSSKLNKLEFEKKQVRKELEHY 619

Query: 134 ANMLLRMYTRWAEKRK 149
                R      E  +
Sbjct: 620 KEKGERAEELENELHR 635


>gi|293331715|ref|NP_001169537.1| hypothetical protein LOC100383413 [Zea mays]
 gi|224029957|gb|ACN34054.1| unknown [Zea mays]
          Length = 229

 Score = 39.4 bits (90), Expect = 0.83,   Method: Composition-based stats.
 Identities = 28/66 (42%), Positives = 42/66 (63%)

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
              C + T++ASG GGQH N  +SAVR+ H+P G++ Q  ++RSQHKN+A A + LR  +
Sbjct: 7   MEQCDMGTFKASGPGGQHCNKRESAVRLKHLPIGIIAQAVEDRSQHKNRASALSRLRTLI 66

Query: 285 YELELQ 290
                +
Sbjct: 67  ALKVRR 72


>gi|262273399|ref|ZP_06051213.1| glutathione-regulated potassium-efflux system ATP-binding protein
           [Grimontia hollisae CIP 101886]
 gi|262222377|gb|EEY73688.1| glutathione-regulated potassium-efflux system ATP-binding protein
           [Grimontia hollisae CIP 101886]
          Length = 640

 Score = 39.4 bits (90), Expect = 0.85,   Method: Composition-based stats.
 Identities = 10/78 (12%), Positives = 33/78 (42%), Gaps = 8/78 (10%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ--NVIEAKMLMRE----RQHLDNAI 56
           + ++++ L      +    +++ + ++  +P L+   N  +   L+RE    +  L+   
Sbjct: 563 IRKKIDTLDT--QLEKFSVKIADIESQLAEPSLYDASNKEKLTELLREQATAKSSLEEVE 620

Query: 57  SFIKEIQDRLCDNLILLE 74
               ++Q++L       +
Sbjct: 621 LEWMDLQEQLEQMEAAFQ 638


>gi|322705423|gb|EFY97009.1| peptidyl-tRNA hydrolase domain protein [Metarhizium anisopliae
           ARSEF 23]
          Length = 182

 Score = 39.4 bits (90), Expect = 0.87,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 49/101 (48%)

Query: 192 RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVR 251
           RI      +     F+   +             +++      + SG GGQ +N T+SAV+
Sbjct: 9   RIPRTHPLAALSRPFTLTALRSKNLPPRPKPPPDAEIEESFLKGSGPGGQKINKTNSAVQ 68

Query: 252 ITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           + H+PTG+VV+ Q  RS+ +N+  A  +L  K+ +L   ++
Sbjct: 69  LKHVPTGIVVKSQATRSRSQNRKHARELLAQKVDDLLHGEQ 109


>gi|260161668|emb|CAN89149.1| VP2 protein [Epizootic hemorrhagic disease virus (serotype 8 /
           strain CPR 3961A)]
          Length = 970

 Score = 39.4 bits (90), Expect = 0.87,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 90/303 (29%), Gaps = 28/303 (9%)

Query: 49  RQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLL 108
           R   +  ++   E +    D +    +  +++     ++    ++ +K   EY+      
Sbjct: 57  RNVFERTVNS--EYRISFPDAINYGIMRYDDEHERYNEKNLMLVEGLKPIGEYEIMLRTS 114

Query: 109 SGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIK-- 166
                    Y   +A      S  ++  +LR+++++ E  KF     E  D +       
Sbjct: 115 VKHQRIKPEYGTQNARI----SFLFSGGILRVHSKFVESLKFDVINYEKEDCDHTDWDAH 170

Query: 167 -SATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISE 225
                        G          LV I     +++      +  V PV    I      
Sbjct: 171 YDMIQRGAVMIGSGTCYDLLKQLELVVIGDIRLSTQERRHLITNQVIPVGTPEITNREPY 230

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            D +       G     +     + R      G+ V+   ER          + +  +  
Sbjct: 231 KDKQTKVRAQQGPRFNELKQNIFSCR-----YGLEVK-HVERLHDDPIISRLDEIADEWM 284

Query: 286 ELELQKR--------EEIANIGESSKTEIG--WGRQIRSYVLQPYQMVKDLRTNIEKTSP 335
             +  +R        E      ++++T      G ++R Y +    +VK   T  E  + 
Sbjct: 285 RRQSSERIEEICDLLEAKGKEVKTARTNAEYYRGARVRLYNVLKQNLVK---TTDEIRNI 341

Query: 336 SDV 338
             V
Sbjct: 342 RGV 344


>gi|197123884|ref|YP_002135835.1| class I peptide chain release factor [Anaeromyxobacter sp. K]
 gi|196173733|gb|ACG74706.1| Class I peptide chain release factor [Anaeromyxobacter sp. K]
          Length = 128

 Score = 39.4 bits (90), Expect = 0.87,   Method: Composition-based stats.
 Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 16/98 (16%)

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           +C    +   G GGQH N T+S VR+ H PT + V   + RSQ +N+  A   LRA+L  
Sbjct: 30  ECDESFFVGGGPGGQHRNKTESGVRLVHRPTAITVTATERRSQLQNRGAALERLRARLQP 89

Query: 287 L---------------ELQKREEIANIGESSK-TEIGW 308
           L                 ++R          K +  GW
Sbjct: 90  LAHRPKPRRPTKPTRGAKERRLSEKKRRGERKASRRGW 127


>gi|331270393|ref|YP_004396885.1| ABC transporter-like protein [Clostridium botulinum BKT015925]
 gi|329126943|gb|AEB76888.1| ABC transporter related protein [Clostridium botulinum BKT015925]
          Length = 637

 Score = 39.4 bits (90), Expect = 0.88,   Method: Composition-based stats.
 Identities = 7/61 (11%), Positives = 24/61 (39%), Gaps = 6/61 (9%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER----QHLDNAISFIKE 61
           ++  L    D  +  + +  L  K     ++ +  +++ + +E       L+   +  +E
Sbjct: 578 RVKNLEQ--DIASLEKDIEELQQKLCLEEIYSDPNKSEEVNKELLTKENELELLYTSWEE 635

Query: 62  I 62
           +
Sbjct: 636 L 636


>gi|257784522|ref|YP_003179739.1| ABC transporter-like protein [Atopobium parvulum DSM 20469]
 gi|257473029|gb|ACV51148.1| ABC transporter related [Atopobium parvulum DSM 20469]
          Length = 672

 Score = 39.4 bits (90), Expect = 0.88,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 25/71 (35%), Gaps = 2/71 (2%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +  ++L+ +        A +R   L     D  L+ +  +    M E Q L   I  ++ 
Sbjct: 600 ETKKRLDEVEAA--LTPAHKRYDELMALMADEALYNDQQKFDECMTEYQALSKKIPALEA 657

Query: 62  IQDRLCDNLIL 72
               L + +  
Sbjct: 658 EWLELSEKMEA 668


>gi|197117086|ref|YP_002137513.1| ABC transporter ATP-binding protein [Geobacter bemidjiensis Bem]
 gi|197086446|gb|ACH37717.1| ABC transporter, ATP-binding protein [Geobacter bemidjiensis Bem]
          Length = 648

 Score = 39.4 bits (90), Expect = 0.89,   Method: Composition-based stats.
 Identities = 6/48 (12%), Positives = 14/48 (29%), Gaps = 1/48 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL-DNAISFIKEIQDR 65
               L+ L      P  + +   A++       L +   S  +  +  
Sbjct: 601 KEGELAELEQAMAAPDFFSDHEAARLAGERHAQLTEEIASLYQAWESA 648


>gi|254516546|ref|ZP_05128605.1| ABC transporter, ATP-binding protein [gamma proteobacterium NOR5-3]
 gi|219674969|gb|EED31336.1| ABC transporter, ATP-binding protein [gamma proteobacterium NOR5-3]
          Length = 632

 Score = 39.4 bits (90), Expect = 0.92,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 5/56 (8%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQH----LDNAISFIKEIQDR 65
           + +    R S L T   DP  ++ +  E K L+ E       L++ I    E+++R
Sbjct: 576 EIEALESRQSELETLCADPAFYERDAEEVKDLLAELSDIAPTLESKIERWTELEER 631


>gi|220918650|ref|YP_002493954.1| Class I peptide chain release factor [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219956504|gb|ACL66888.1| Class I peptide chain release factor [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 123

 Score = 39.4 bits (90), Expect = 0.92,   Method: Composition-based stats.
 Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 16/98 (16%)

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           +C    +   G GGQH N T+S VR+ H PT + V   + RSQ +N+  A   LRA+L  
Sbjct: 25  ECDESFFVGGGPGGQHRNKTESGVRLVHRPTAITVTATERRSQLQNRGAALERLRARLQP 84

Query: 287 L---------------ELQKREEIANIGESSK-TEIGW 308
           L                 ++R          K +  GW
Sbjct: 85  LAHRPKPRRPTRPTRGAKERRLTEKKRRGERKASRRGW 122


>gi|261418563|ref|YP_003252245.1| ABC transporter [Geobacillus sp. Y412MC61]
 gi|297528591|ref|YP_003669866.1| ABC transporter [Geobacillus sp. C56-T3]
 gi|319765377|ref|YP_004130878.1| ABC transporter [Geobacillus sp. Y412MC52]
 gi|261375020|gb|ACX77763.1| ABC transporter related protein [Geobacillus sp. Y412MC61]
 gi|297251843|gb|ADI25289.1| ABC transporter related protein [Geobacillus sp. C56-T3]
 gi|317110243|gb|ADU92735.1| ABC transporter related protein [Geobacillus sp. Y412MC52]
          Length = 641

 Score = 39.4 bits (90), Expect = 0.95,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 15/40 (37%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58
             ++L+ L+ +  DP +  +    +  ++    L      
Sbjct: 97  LEKQLAELSMQLGDPDVLADPARYEKTLKTYDELQEQYKE 136



 Score = 37.9 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 7/64 (10%), Positives = 28/64 (43%), Gaps = 6/64 (9%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFIKEI 62
           L+ +    +      +++ +  +  DP ++ +    + L +E    +Q ++  ++  +++
Sbjct: 580 LDEIEA--EIAALEAQIAEIEQQLCDPSVYGDYETMQRLTQENDERKQRVEMLLAEWEQL 637

Query: 63  QDRL 66
              L
Sbjct: 638 YTSL 641


>gi|54020851|ref|NP_001005671.1| ribosome binding protein 1 homolog 180kDa [Xenopus (Silurana)
           tropicalis]
 gi|49250498|gb|AAH74706.1| ribosome binding protein 1 homolog 180kDa (dog) [Xenopus (Silurana)
           tropicalis]
          Length = 1037

 Score = 39.4 bits (90), Expect = 0.95,   Method: Composition-based stats.
 Identities = 32/302 (10%), Positives = 84/302 (27%), Gaps = 18/302 (5%)

Query: 19  AVQRLSFLNTKTED-----PHLWQNVIEAKMLMRERQHLDNAISFIK-EIQDRLCDNLIL 72
             +RL  +N +         +L  +  +AK   +    L   +   + E + +  +   L
Sbjct: 581 LQKRLDEVNEELRKSQSTYQNLLADTEKAKAEQKNHADLQTKLQSYEAESKQKSEELDKL 640

Query: 73  LEL-----ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
            +               ++     L+  + +   K+ +     EA++    + +      
Sbjct: 641 NKQLQGVSGENSQLMERIKSIEALLEAGQNKDTDKEKQQQEVREAETAQLQIRLQEKDSH 700

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGV 187
             S +     L+      + +            E  G+   T            K ++ +
Sbjct: 701 IASLEKETSELKEAVEQQKNKNNDLREKNWQAMEALGLSEKTSE---EKLNSEKKAKEEM 757

Query: 188 HRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTD 247
            + +      +       +  I + P    S  ++           + +  GG   +   
Sbjct: 758 VQQLNAVQIQTKETLQLLYPQITIEPQQSYSEWLQEFRQRTTEFLSQPTEKGGSSESQLK 817

Query: 248 SAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELEL---QKREEIANIGESSKT 304
                    + +  +C+Q R+           L+  + E E     K          S +
Sbjct: 818 LK-EAEDTQSALQTECEQYRTILGETEAMLKALQKSVEEEEQVWKAKLAASEEDLSKSHS 876

Query: 305 EI 306
           ++
Sbjct: 877 QV 878


>gi|39995653|ref|NP_951604.1| peptidyl-tRNA hydrolase domain-containing protein [Geobacter
           sulfurreducens PCA]
 gi|39982416|gb|AAR33877.1| peptidyl-tRNA hydrolase domain protein [Geobacter sulfurreducens
           PCA]
 gi|298504676|gb|ADI83399.1| peptidyl-tRNA hydrolase-related protein [Geobacter sulfurreducens
           KN400]
          Length = 126

 Score = 39.4 bits (90), Expect = 0.95,   Method: Composition-based stats.
 Identities = 30/73 (41%), Positives = 44/73 (60%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
            D   E+ +SE+D      R+SGAGGQHVN T + V+I H PTG+ V+C ++RSQ  N+ 
Sbjct: 17  RDKMAELGVSEADLEETFVRSSGAGGQHVNKTATCVQIRHRPTGIEVKCMKDRSQSVNRF 76

Query: 275 QAWNMLRAKLYEL 287
            A   +  ++  L
Sbjct: 77  LARREILERIERL 89


>gi|56418775|ref|YP_146093.1| ABC transporter ATP-binding protein [Geobacillus kaustophilus
           HTA426]
 gi|56378617|dbj|BAD74525.1| ABC transporter (ATP-binding protein) [Geobacillus kaustophilus
           HTA426]
          Length = 641

 Score = 39.4 bits (90), Expect = 0.95,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 15/40 (37%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58
             ++L+ L+ +  DP +  +    +  ++    L      
Sbjct: 97  LEKQLAELSMQLGDPDVLADPARYEKTLKTYDELQEQYKE 136



 Score = 37.5 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 7/64 (10%), Positives = 28/64 (43%), Gaps = 6/64 (9%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFIKEI 62
           L+ +    +      +++ +  +  DP ++ +    + L +E    +Q ++  ++  +++
Sbjct: 580 LDEIEA--EIATLEAQIAEIEQQLCDPSVYGDYETMQRLTQENDERKQRVEMLLAEWEQL 637

Query: 63  QDRL 66
              L
Sbjct: 638 YTSL 641


>gi|218191159|gb|EEC73586.1| hypothetical protein OsI_08052 [Oryza sativa Indica Group]
          Length = 1667

 Score = 39.4 bits (90), Expect = 0.97,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 1/54 (1%)

Query: 15   DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            D  N   RL    T+      W+   E K + +E+  L   +  ++  + R+ D
Sbjct: 1437 DKKNLHDRLHEAETQLSQFKAWK-REELKKITKEKNALAERLKGVEASRKRVDD 1489


>gi|189196084|ref|XP_001934380.1| peptidyl-tRNA hydrolase domain containing protein [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187980259|gb|EDU46885.1| peptidyl-tRNA hydrolase domain containing protein [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 175

 Score = 39.0 bits (89), Expect = 0.99,   Method: Composition-based stats.
 Identities = 28/72 (38%), Positives = 45/72 (62%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
              + + +SD   +  + SG GGQ +N T SAV++ HIPTG+VV+ Q  RS+  N+  A 
Sbjct: 25  PPRVPLPDSDLIENFLKGSGPGGQKINKTSSAVQLKHIPTGIVVKYQDTRSREINRKMAR 84

Query: 278 NMLRAKLYELEL 289
            +L+ ++ EL+L
Sbjct: 85  RILQDRIEELQL 96


>gi|332701466|ref|ZP_08421554.1| ABC transporter related protein [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332551615|gb|EGJ48659.1| ABC transporter related protein [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 659

 Score = 39.0 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 6/55 (10%), Positives = 21/55 (38%), Gaps = 4/55 (7%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN----AISFIKEIQDRL 66
            +      + LN +   P L+ +    + +      +++    A++  +E++   
Sbjct: 591 IEALETEQAELNARLSSPGLYSDPQSVQKVQARMAEIESGLDRALARWEELESAQ 645


>gi|46125917|ref|XP_387512.1| hypothetical protein FG07336.1 [Gibberella zeae PH-1]
          Length = 189

 Score = 39.0 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 26/63 (41%), Positives = 41/63 (65%)

Query: 225 ESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL 284
           ES+      + SG GGQ +N T+SAV++ H+PTG+VV+ Q  RS+ +N+  A  +L  ++
Sbjct: 44  ESEIEESYVKGSGPGGQKINKTNSAVQLKHVPTGIVVKSQATRSRDQNRKHARELLAQRV 103

Query: 285 YEL 287
            EL
Sbjct: 104 DEL 106


>gi|149179343|ref|ZP_01857902.1| hypothetical protein PM8797T_29083 [Planctomyces maris DSM 8797]
 gi|148841815|gb|EDL56219.1| hypothetical protein PM8797T_29083 [Planctomyces maris DSM 8797]
          Length = 179

 Score = 39.0 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 23/60 (38%), Positives = 33/60 (55%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLY 285
            +C+I+  R SG GGQH N  ++ V I HIPT    +  + R Q +N++ A   LR  L 
Sbjct: 27  KNCQIEQVRRSGPGGQHRNKVETGVVIKHIPTNFTGEASERRQQGRNRSMALFRLRVNLA 86


>gi|327438491|dbj|BAK14856.1| ATPase component of ABC transporters with duplicated ATPase domains
           [Solibacillus silvestris StLB046]
          Length = 646

 Score = 39.0 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 1/77 (1%)

Query: 8   NCLGGLF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           + +  +F +  N  Q L  L  +  DP ++++  +   +M E   L +        Q   
Sbjct: 85  DEMMTIFANLQNQEQTLRQLEQQMADPAIYEDSEQYARIMAEYDQLQHDFKDAGGYQYEA 144

Query: 67  CDNLILLELALEEDDCS 83
               +L  +    +D  
Sbjct: 145 DTRSVLHGMQFFPEDYQ 161


>gi|167761759|ref|ZP_02433886.1| hypothetical protein BACSTE_00097 [Bacteroides stercoris ATCC
           43183]
 gi|167700395|gb|EDS16974.1| hypothetical protein BACSTE_00097 [Bacteroides stercoris ATCC
           43183]
          Length = 656

 Score = 39.0 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 10/74 (13%), Positives = 26/74 (35%), Gaps = 5/74 (6%)

Query: 2   KLSRQLNCLGGLF-----DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           +L+++L  L         + +     +S L  K   P    ++   +   + +  LD+ +
Sbjct: 582 ELNKRLKKLERRVADCEAEIEQTEAAISILEAKMATPEGASDMALYEQHQKLKAQLDSVM 641

Query: 57  SFIKEIQDRLCDNL 70
                +   L +  
Sbjct: 642 EEWDAVSCELEEAR 655


>gi|85860191|ref|YP_462393.1| peptide chain release factor [Syntrophus aciditrophicus SB]
 gi|85723282|gb|ABC78225.1| peptide chain release factor [Syntrophus aciditrophicus SB]
          Length = 136

 Score = 39.0 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 31/85 (36%), Positives = 46/85 (54%)

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
                + ISE D R    R+SG GGQ+VN T + V + H+PTG+ V+CQQ+RSQ  N+  
Sbjct: 13  QRMARLGISEDDLRETFIRSSGPGGQNVNKTATCVYLVHLPTGLSVKCQQDRSQTVNRLL 72

Query: 276 AWNMLRAKLYELELQKREEIANIGE 300
           A  +L  ++  L+  +        E
Sbjct: 73  ARRLLLDRIERLKTGRIAAEKARIE 97


>gi|256422750|ref|YP_003123403.1| ABC transporter [Chitinophaga pinensis DSM 2588]
 gi|256037658|gb|ACU61202.1| ABC transporter related [Chitinophaga pinensis DSM 2588]
          Length = 667

 Score = 39.0 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 7/60 (11%), Positives = 21/60 (35%), Gaps = 1/60 (1%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-KEIQDRLCDNLILLE 74
                ++ + + T   +P ++ +  + + L  E   L   +    +E +      + L  
Sbjct: 607 LAKLNEKKATIETAMNNPDVYADRKKFQQLEAEYNQLGKELKQATEEYEKVFEILMELEN 666


>gi|320037150|gb|EFW19088.1| hypothetical protein CPSG_04634 [Coccidioides posadasii str.
           Silveira]
          Length = 172

 Score = 39.0 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 1/93 (1%)

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
                  I ES+      + SG GGQ +N T SAV++ H+PT  VV+ Q  RS+ +N+  
Sbjct: 36  QMPPRPTIDESEITGTYLKGSGPGGQKINKTSSAVQLIHLPTNTVVKSQATRSRSQNRKI 95

Query: 276 AWNMLRAKLYELEL-QKREEIANIGESSKTEIG 307
           A  +L  K+  L+   +           K +  
Sbjct: 96  ALQILAEKVELLQKGDESRAAIVAETKRKRKAS 128


>gi|195426674|ref|XP_002061432.1| GK20726 [Drosophila willistoni]
 gi|194157517|gb|EDW72418.1| GK20726 [Drosophila willistoni]
          Length = 167

 Score = 39.0 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 2/93 (2%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
               IE    ESD      R SG GGQ VN T + V + H+PT + ++C   R   KN+ 
Sbjct: 47  NPLEIEFSFKESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNLTIKCHTHRLASKNRI 106

Query: 275 QAWNMLRAKLYELELQKR--EEIANIGESSKTE 305
           +A  +L  KL E    +          E  K+ 
Sbjct: 107 EARKLLLEKLDEHLNGENSIAAQIKGQEQRKSL 139


>gi|300676892|gb|ADK26764.1| coiled-coil domain containing 88A [Zonotrichia albicollis]
          Length = 1881

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/142 (12%), Positives = 44/142 (30%), Gaps = 3/142 (2%)

Query: 17  DNAVQRLSFLNTKTEDP--HLWQNVIEAKMLMRERQHLDNAISFIKE-IQDRLCDNLILL 73
               ++L  L  +       L  +  ++K L++E+  L+  +  ++E  + ++       
Sbjct: 500 QRLNKKLEELENEISQEKQSLQNSQNQSKDLLKEKAQLEKTLEALRENSERQIKLLEQEN 559

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E   +       +       R+K   +  +       E  S    +E        E + +
Sbjct: 560 EHLNQTVASLRQRSQISAEARMKEIEKENKILHESIKETSSKLNKMEFEKKQVRKELEHY 619

Query: 134 ANMLLRMYTRWAEKRKFKTEAL 155
                R      E  + + E  
Sbjct: 620 KEKGERAEELENELHRLEKENE 641


>gi|85708088|ref|ZP_01039154.1| ABC transporter [Erythrobacter sp. NAP1]
 gi|85689622|gb|EAQ29625.1| ABC transporter [Erythrobacter sp. NAP1]
          Length = 604

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 20/65 (30%), Gaps = 11/65 (16%)

Query: 15  DWDNAVQRLSFLNT-------KTEDPH-LWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           D++    R+  L            DP     +      + +    L+NA     E ++R 
Sbjct: 539 DYEQLPARIEELEAAIAKAEGILADPDLFASDPQRFATISK---GLENARRQKDEAEERW 595

Query: 67  CDNLI 71
            D   
Sbjct: 596 LDIAE 600


>gi|254785803|ref|YP_003073232.1| ABC transporter [Teredinibacter turnerae T7901]
 gi|237684364|gb|ACR11628.1| ABC transporter [Teredinibacter turnerae T7901]
          Length = 632

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/78 (12%), Positives = 31/78 (39%), Gaps = 3/78 (3%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQHLDNAISFIKEI 62
           ++++  L          ++L  + ++  DP ++  +  E   L++ +  L   +  I+  
Sbjct: 557 NKRIKQLEQ--KLSKTTEKLEKVESRLADPDIYDGDGAELSELLKTQATLKQEVDDIELA 614

Query: 63  QDRLCDNLILLELALEED 80
                +    LE ++  +
Sbjct: 615 WMEESEAKEALEASIRAE 632


>gi|78486102|ref|YP_392027.1| ABC transporter related [Thiomicrospira crunogena XCL-2]
 gi|78364388|gb|ABB42353.1| ABC transporter ATP-binding protein homolog [Thiomicrospira
           crunogena XCL-2]
          Length = 642

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 21/57 (36%), Gaps = 5/57 (8%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER----QHLDNAISFIKEIQDRLCD 68
            +   Q L  LN +   P  +Q     + ++         L+ A    ++++  L D
Sbjct: 587 IETLEQELEKLNVQMSAPDFYQ-QENTQAVIDRLNTCESELEAAFERWEKLEALLND 642


>gi|45201377|ref|NP_986947.1| AGR281Cp [Ashbya gossypii ATCC 10895]
 gi|44986311|gb|AAS54771.1| AGR281Cp [Ashbya gossypii ATCC 10895]
          Length = 176

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 9/81 (11%)

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL-------- 284
           +   G GGQ +N  +S V++ H+P+G+V++CQ  RS+ +N+  A   L A L        
Sbjct: 59  HGGRGPGGQKINKCNSKVQLRHVPSGIVIECQATRSREQNRKLAREKLAAALAQPPGSAS 118

Query: 285 -YELELQKREEIANIGESSKT 304
             EL L+         ++ K+
Sbjct: 119 ERELALRTWARQGKHAQARKS 139


>gi|226293278|gb|EEH48698.1| hypothetical protein PADG_04777 [Paracoccidioides brasiliensis
           Pb18]
          Length = 177

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 29/101 (28%), Positives = 49/101 (48%)

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
             FS      V       +++ ++      + SG GGQ +N T+SAV++ H PTG+VV+ 
Sbjct: 25  RFFSHCHQLSVKQMPPRPKLNPAEVTGTYLKGSGPGGQAINKTNSAVQLIHKPTGIVVKS 84

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           Q  RS+ +N+  A  +L  K+       +   A + E+ K 
Sbjct: 85  QATRSRTQNQKIAMGILAEKVELHLKGDKSRAAIVAETKKK 125


>gi|283853147|ref|ZP_06370401.1| ABC transporter related protein [Desulfovibrio sp. FW1012B]
 gi|283571486|gb|EFC19492.1| ABC transporter related protein [Desulfovibrio sp. FW1012B]
          Length = 658

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 6/61 (9%), Positives = 22/61 (36%), Gaps = 4/61 (6%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL----DNAISFIKEIQDRLCDNL 70
           + +  + +   +     DP  +        L +E   L    ++ ++ +  +++ + D  
Sbjct: 589 ELEALLAKQGEVEATMADPETYAQKELFSTLSKEYGALSHAAEDLLARMAVLEEEIGDLE 648

Query: 71  I 71
            
Sbjct: 649 A 649


>gi|154483682|ref|ZP_02026130.1| hypothetical protein EUBVEN_01386 [Eubacterium ventriosum ATCC
           27560]
 gi|149735592|gb|EDM51478.1| hypothetical protein EUBVEN_01386 [Eubacterium ventriosum ATCC
           27560]
          Length = 656

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 22/51 (43%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLI 71
            RL+ L+    DP +  N  +   + +E+  +   +  + +  + L D L 
Sbjct: 606 DRLNELDELLADPAVSTNSAKLNEISKEQNEISERLDELMDQWEILSDQLD 656


>gi|292492579|ref|YP_003528018.1| ABC transporter [Nitrosococcus halophilus Nc4]
 gi|291581174|gb|ADE15631.1| ABC transporter related protein [Nitrosococcus halophilus Nc4]
          Length = 635

 Score = 38.6 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 27/73 (36%), Gaps = 9/73 (12%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++L+ + G    +      S L+ +   P L+Q+  +     +E   L   +     +
Sbjct: 560 LQKKLDEIEGT--LEKLQAEKSTLDQELAHPDLYQDPQQ-----KEH--LKALLMKQARL 610

Query: 63  QDRLCDNLILLEL 75
           +  L +      +
Sbjct: 611 EQTLIETEEAWLM 623


>gi|227510674|ref|ZP_03940723.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus brevis subsp. gravesensis ATCC 27305]
 gi|227189795|gb|EEI69862.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus brevis subsp. gravesensis ATCC 27305]
          Length = 652

 Score = 38.6 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 30/73 (41%), Gaps = 6/73 (8%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER----QHLDNAIS 57
           KL+R++  L      D   +  + +  +   P ++ ++ +A  L ++     Q +    S
Sbjct: 582 KLNREVTDLES--QLDELSKSKNNIENQMAQPEVFNDLDKASDLQKKLEMVDQEIKETES 639

Query: 58  FIKEIQDRLCDNL 70
             ++   +L D  
Sbjct: 640 KWEQKSLQLEDIE 652


>gi|149245034|ref|XP_001527051.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146449445|gb|EDK43701.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 172

 Score = 38.6 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 9/81 (11%)

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE---- 288
           +  SG GGQ +N T+S V++TH PTG+VV CQ+ RSQ +N+ +A  +L  KL +++    
Sbjct: 43  HGGSGPGGQKINKTNSKVQLTHKPTGIVVSCQESRSQDQNRKKAREILALKLEDIQNPQG 102

Query: 289 -----LQKREEIANIGESSKT 304
                L++R +        K 
Sbjct: 103 SRNTILKERAQTVKANRMKKA 123


>gi|300676795|gb|ADK26671.1| coiled-coil domain containing 88A [Zonotrichia albicollis]
          Length = 1881

 Score = 38.6 bits (88), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/142 (12%), Positives = 44/142 (30%), Gaps = 3/142 (2%)

Query: 17  DNAVQRLSFLNTKTEDP--HLWQNVIEAKMLMRERQHLDNAISFIKE-IQDRLCDNLILL 73
               ++L  L  +       L  +  ++K L++E+  L+  +  ++E  + ++       
Sbjct: 500 QRLNKKLEELENEISQEKQSLQNSQNQSKDLLKEKAQLEKTLEALRENSERQIKLLEQEN 559

Query: 74  ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
           E   +       +       R+K   +  +       E  S    +E        E + +
Sbjct: 560 EHLNQTVASLRQRSQISAEARMKEIEKENKILHESIKETSSKLNKMEFEKKQVRKELEHY 619

Query: 134 ANMLLRMYTRWAEKRKFKTEAL 155
                R      E  + + E  
Sbjct: 620 KEKGERAEELENELHRLEKENE 641


>gi|326391034|ref|ZP_08212582.1| glycosyltransferase 36 [Thermoanaerobacter ethanolicus JW 200]
 gi|325992902|gb|EGD51346.1| glycosyltransferase 36 [Thermoanaerobacter ethanolicus JW 200]
          Length = 2888

 Score = 38.6 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/126 (11%), Positives = 44/126 (34%), Gaps = 8/126 (6%)

Query: 1    MKLSRQLNCLGGLFDWDNAVQRL--SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58
            ++L++ L     + D +   + +  + LN KT  P  W+  +    +  +    ++ +  
Sbjct: 1154 IELAKGLKDTIKMLDIEGITEDIFRNILNKKTLMPSDWE--VFLSKISEKLSSTEDEVGN 1211

Query: 59   IKEIQDRL----CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
            I+ +++ +     +    L     ++     +      +  +     K+ E +       
Sbjct: 1212 IERLKNIIGALKREMKEFLAWTEFDERQKEQEIFKRYKEVFEEHSSPKELEKVYKNYLLE 1271

Query: 115  NDAYLE 120
             +   E
Sbjct: 1272 IEEVFE 1277


>gi|149640804|ref|XP_001509593.1| PREDICTED: similar to Hook-related protein 1 isoform 2
           [Ornithorhynchus anatinus]
          Length = 1880

 Score = 38.6 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/170 (12%), Positives = 51/170 (30%), Gaps = 11/170 (6%)

Query: 2   KLSRQLNCLGG----LFDWDN----AVQRLSFLNTKTEDP--HLWQNVIEAKMLMRERQH 51
           +L   +  + G    +   +       ++L  L  +       L  +   +K LM+E+  
Sbjct: 477 ELRSSVGSVEGNNSKILKLEKENQRLSKKLEGLENEISQEKQSLQNSQNLSKDLMKEKAQ 536

Query: 52  LDNAISFIKE-IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
           L+  +  ++E  + ++       E   +       +       R+K   +  +       
Sbjct: 537 LEKTVETLRENSERQIKILEQENEHLNQTVTSLRQRSQISAEARMKDIEKENKILHESIK 596

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
           E  S    +E        E + +     R      E  + + E   +   
Sbjct: 597 ETSSKLNKIEFEKRQVRKELEHFKEKGERAEELENELHRLEKENESLQKK 646


>gi|149640806|ref|XP_001509508.1| PREDICTED: similar to Hook-related protein 1 isoform 1
           [Ornithorhynchus anatinus]
          Length = 1853

 Score = 38.6 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/170 (12%), Positives = 51/170 (30%), Gaps = 11/170 (6%)

Query: 2   KLSRQLNCLGG----LFDWDN----AVQRLSFLNTKTEDP--HLWQNVIEAKMLMRERQH 51
           +L   +  + G    +   +       ++L  L  +       L  +   +K LM+E+  
Sbjct: 477 ELRSSVGSVEGNNSKILKLEKENQRLSKKLEGLENEISQEKQSLQNSQNLSKDLMKEKAQ 536

Query: 52  LDNAISFIKE-IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
           L+  +  ++E  + ++       E   +       +       R+K   +  +       
Sbjct: 537 LEKTVETLRENSERQIKILEQENEHLNQTVTSLRQRSQISAEARMKDIEKENKILHESIK 596

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDG 160
           E  S    +E        E + +     R      E  + + E   +   
Sbjct: 597 ETSSKLNKIEFEKRQVRKELEHFKEKGERAEELENELHRLEKENESLQKK 646


>gi|256045469|ref|ZP_05448355.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str.
          Rev.1]
          Length = 128

 Score = 38.6 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/76 (14%), Positives = 29/76 (38%), Gaps = 5/76 (6%)

Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
          D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 23 DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 78

Query: 76 ALEEDDCSILQETSDN 91
            +    + ++  +  
Sbjct: 79 RDDASTDAEMRALAVE 94


>gi|295666315|ref|XP_002793708.1| hypothetical protein PAAG_04618 [Paracoccidioides brasiliensis
           Pb01]
 gi|226278002|gb|EEH33568.1| hypothetical protein PAAG_04618 [Paracoccidioides brasiliensis
           Pb01]
          Length = 175

 Score = 38.6 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 29/101 (28%), Positives = 49/101 (48%)

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC 263
             FS      V       +++ ++      + SG GGQ +N T+SAV++ H PTG+VV+ 
Sbjct: 25  RFFSHCHQLSVKQMPPRPKLNPAEITGTYLKGSGPGGQAINKTNSAVQLIHKPTGIVVKS 84

Query: 264 QQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKT 304
           Q  RS+ +N+  A  +L  K+       +   A + E+ K 
Sbjct: 85  QATRSRTQNQKIAMGILAEKVELHLKGDKSRAAIVAETKKK 125


>gi|218260605|ref|ZP_03475832.1| hypothetical protein PRABACTJOHN_01496 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224451|gb|EEC97101.1| hypothetical protein PRABACTJOHN_01496 [Parabacteroides johnsonii
           DSM 18315]
          Length = 562

 Score = 38.6 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 43/122 (35%), Gaps = 2/122 (1%)

Query: 1   MKLSRQLNCL--GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58
           ++  + +  +   G+ D  + ++    +N K  DP + ++  +   L+  +  L + I  
Sbjct: 83  LEPGKTVKEIVQEGVQDIVDTLKEYEEVNEKFGDPEVLEDPDKMDALINRQAELQDKIDA 142

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
                        +  L    +D  +   +    +R+ L     Q   +L  +  +N   
Sbjct: 143 TDAWNLDSRLERAMDALRCPPEDQVVDTLSGGERRRVALCRLLLQQPDVLLLDEPTNHLD 202

Query: 119 LE 120
            E
Sbjct: 203 AE 204


>gi|313622946|gb|EFR93247.1| ABC transporter, ATP-binding protein [Listeria innocua FSL J1-023]
          Length = 650

 Score = 38.6 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 8/68 (11%), Positives = 29/68 (42%), Gaps = 6/68 (8%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFI 59
            R+L  +      +   ++++ L  +   P ++Q+  +A  + +E    +   +  +   
Sbjct: 583 KRKLEEVEKSM--EETDEKIAELELQLTKPEIFQDHEKAFEITQELDVVKARGEKLMEEW 640

Query: 60  KEIQDRLC 67
           +++ + L 
Sbjct: 641 EKVSEELE 648


>gi|313676944|ref|YP_004054940.1| ABC transporter related protein [Marivirga tractuosa DSM 4126]
 gi|312943642|gb|ADR22832.1| ABC transporter related protein [Marivirga tractuosa DSM 4126]
          Length = 561

 Score = 38.6 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 7/46 (15%), Positives = 18/46 (39%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           N ++    +N K  DP +  N  +   L+ ++  +   +      +
Sbjct: 101 NLLKEFEEINEKFADPEVLDNPDKMNDLIEQQAKVQEKLDHANAWE 146


>gi|223042066|ref|ZP_03612242.1| ABC transporter ATP-binding protein [Actinobacillus minor 202]
 gi|223017141|gb|EEF15577.1| ABC transporter ATP-binding protein [Actinobacillus minor 202]
          Length = 639

 Score = 38.6 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 27/75 (36%), Gaps = 5/75 (6%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLMRERQHLDNAISFIK 60
           L +++  L    D D A  +L+ L        ++  +N  +    + ++      +  I+
Sbjct: 565 LRKKITQLEK--DLDKASSQLAELEALLASSEIYEAENKAKLTETLAKQVEAKQKVEQIE 622

Query: 61  -EIQDRLCDNLILLE 74
            E  +       +L 
Sbjct: 623 MEWLEAQEQLEAMLN 637


>gi|324521421|gb|ADY47851.1| Peptide chain release factor [Ascaris suum]
          Length = 141

 Score = 38.6 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 35/97 (36%), Positives = 43/97 (44%), Gaps = 11/97 (11%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
            EI   DC       SG GGQ VNT  +AV + HIPTG+VV+  + R   KN   A+  L
Sbjct: 35  PEIRREDCEQKFISGSGPGGQKVNTAQNAVMLKHIPTGIVVKVHESRLLPKNIEIAYERL 94

Query: 281 RAKL-----------YELELQKREEIANIGESSKTEI 306
           R K            YE +L+K E         K E 
Sbjct: 95  RLKYALDRHVNKEKCYEEQLKKLERAKEEKLKRKREA 131


>gi|298386913|ref|ZP_06996468.1| ABC transporter, ATP-binding protein [Bacteroides sp. 1_1_14]
 gi|298260587|gb|EFI03456.1| ABC transporter, ATP-binding protein [Bacteroides sp. 1_1_14]
          Length = 680

 Score = 38.6 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 9/74 (12%), Positives = 31/74 (41%), Gaps = 5/74 (6%)

Query: 2   KLSRQLNCL-GGLFDWDNAVQR----LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           +L++++  L   + D + +++     ++ L  K   P    ++   +   + ++ LD  +
Sbjct: 606 ELNKKIKKLERQVADCEASIEETESAIAILEAKMATPEGASDMQLYERHQKLKKQLDTTV 665

Query: 57  SFIKEIQDRLCDNL 70
              + +   L +  
Sbjct: 666 EEWERVSMELEEVK 679


>gi|205372354|ref|ZP_03225168.1| ABC transporter ATP-binding protein uup [Bacillus coahuilensis
           m4-4]
          Length = 642

 Score = 38.6 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 8/35 (22%), Positives = 18/35 (51%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER 49
           D     +++  L  +  DP +++N  E + +M+E 
Sbjct: 93  DVQELERQIRSLEQQMADPTIYENATEYERVMKEY 127



 Score = 35.9 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 8/53 (15%), Positives = 16/53 (30%), Gaps = 7/53 (13%)

Query: 16  WDNAVQRLSFLN-------TKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            +    R+  L            DP ++Q+    + L  E       +  + E
Sbjct: 584 LEEVEARIEELEVAIATNEEALCDPEVFQDHEAVQKLTDEINAYKQEVDDLME 636


>gi|116873510|ref|YP_850291.1| ABC transporter, ATP-binding protein [Listeria welshimeri serovar
           6b str. SLCC5334]
 gi|116742388|emb|CAK21512.1| ABC transporter, ATP-binding protein [Listeria welshimeri serovar
           6b str. SLCC5334]
          Length = 650

 Score = 38.6 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 9/70 (12%), Positives = 28/70 (40%), Gaps = 3/70 (4%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI-KEI 62
            R+L  +      +   ++++ L  +   P ++QN  +A  + +E   +      + +E 
Sbjct: 583 KRKLEEIEKSM--EETDEKIAELELQLTKPEIFQNHEKALEITQELDVIKANGESLMEEW 640

Query: 63  QDRLCDNLIL 72
           +    +   +
Sbjct: 641 ETVSEELESM 650


>gi|54296203|ref|YP_122572.1| hypothetical protein lpp0229 [Legionella pneumophila str. Paris]
 gi|53749988|emb|CAH11376.1| hypothetical protein lpp0229 [Legionella pneumophila str. Paris]
          Length = 136

 Score = 38.6 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 42/85 (49%)

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           +    + I E+D        SG GGQ ++ T S V + H+PTG+ V+CQ+ RS+  N+  
Sbjct: 12  EKMTNLHIYETDLSEKFILGSGKGGQKLHKTASTVYLKHLPTGMEVKCQESRSREDNRYF 71

Query: 276 AWNMLRAKLYELELQKREEIANIGE 300
           A   L  KL  +   ++ +     E
Sbjct: 72  ARQRLCEKLQAVFSDEKTKTQQRIE 96


>gi|323143446|ref|ZP_08078129.1| ABC transporter, ATP-binding protein [Succinatimonas hippei YIT
           12066]
 gi|322416731|gb|EFY07382.1| ABC transporter, ATP-binding protein [Succinatimonas hippei YIT
           12066]
          Length = 641

 Score = 38.6 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/78 (12%), Positives = 34/78 (43%), Gaps = 9/78 (11%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ--NVIEAKMLMRERQHL-----DNA 55
           L +++  +    + +    R++ + +   D  ++   +  E + L++ER  L     +  
Sbjct: 564 LKQKIEKIER--ELEQIKNRMAEIESILADSSIYNVEHKAELENLLKERGTLISNQEELE 621

Query: 56  ISFIKEIQDRLCDNLILL 73
           ++++ E+++       L 
Sbjct: 622 VNYLLELENLENKEKELH 639


>gi|242079757|ref|XP_002444647.1| hypothetical protein SORBIDRAFT_07g025350 [Sorghum bicolor]
 gi|241940997|gb|EES14142.1| hypothetical protein SORBIDRAFT_07g025350 [Sorghum bicolor]
          Length = 806

 Score = 38.6 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 23/206 (11%), Positives = 65/206 (31%), Gaps = 7/206 (3%)

Query: 2   KLSRQLNCLGG-LFDWD-NAVQRLSFLNT-KTEDPHLWQNVIEAKMLMRERQHLDNAISF 58
           K+  QL+     + + +     +   LN  K +   +W N    +   +E   +      
Sbjct: 118 KIKEQLHEREQYILELEMKLNDKDRELNALKIDHQTVWANQDLIREQTKELATVRRERDN 177

Query: 59  IK----EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
            +    +   ++ D   LL     +      Q  +     +  + + ++  + +S   + 
Sbjct: 178 SEAERAQHLKQIHDLQELLREKESQFIALDEQHRAAQDNILYKDEQLREAHAWVSQVREM 237

Query: 115 NDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKG 174
           +    +          + +    +    ++AE ++     ++    E A  +++     G
Sbjct: 238 DALQSQSLQVELRERMEQFNQYWISFQQQYAEMQRSLLHTIQQLQQELAETRASGAQKDG 297

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNS 200
           P        E    + +  S   + S
Sbjct: 298 PQVSREGSAESSHVQSIANSVASNGS 323


>gi|114571176|ref|YP_757856.1| ABC transporter-like protein [Maricaulis maris MCS10]
 gi|114341638|gb|ABI66918.1| ABC transporter related protein [Maricaulis maris MCS10]
          Length = 602

 Score = 38.6 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 7/60 (11%), Positives = 19/60 (31%), Gaps = 4/60 (6%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER----QHLDNAISFIKEIQDRLCDNL 70
           + +   Q ++ L     DP L+ +      + +      Q   +      E++    +  
Sbjct: 542 EIEKLSQEIARLEADMADPKLFADSARFTAVSKRLGEAMQDRADKEDRWLELEALREEIE 601


>gi|157115053|ref|XP_001652537.1| hypothetical protein AaeL_AAEL007062 [Aedes aegypti]
 gi|108877071|gb|EAT41296.1| hypothetical protein AaeL_AAEL007062 [Aedes aegypti]
          Length = 729

 Score = 38.6 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 41/141 (29%), Gaps = 14/141 (9%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
            +  L    D D+       LN + EDPH+  +      L    Q  +  +   + +   
Sbjct: 354 TVELLRFYLDVDS-------LNKELEDPHITTDP---TKLSSLHQQSEKLLQTYQSMMKN 403

Query: 66  LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGA 125
             ++ I   L    +            +  K   +  ++  L+ G  D  +   +     
Sbjct: 404 EKESSIATTLNEAHERVK----EKLEDKWRKQFSKTFEYFELIYGNRDIKENSDKKSPEG 459

Query: 126 GGTESQDWANMLLRMYTRWAE 146
           GG      ++          +
Sbjct: 460 GGGSGTKLSSKFKEAIRGAVD 480


>gi|50287521|ref|XP_446190.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525497|emb|CAG59114.1| unnamed protein product [Candida glabrata]
          Length = 187

 Score = 38.6 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 37/62 (59%)

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKR 292
           +  +G GGQ +N  +S V+I H+P+ +VV CQ  RS+ +N+  A   L  +L   +L + 
Sbjct: 57  HGGTGPGGQKINKCNSKVQIKHVPSNIVVTCQATRSRDQNRKIAREKLALELERWQLGQE 116

Query: 293 EE 294
           ++
Sbjct: 117 KD 118


>gi|298505048|gb|ADI83771.1| ABC transporter, ATP-binding protein [Geobacter sulfurreducens
           KN400]
          Length = 645

 Score = 38.6 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 22/61 (36%), Gaps = 3/61 (4%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKEIQ 63
           ++L  L            L+ L  +  DP  + +  +A+    E   L   I+   +E +
Sbjct: 583 KRLEELESA--IAAEEGHLAALEGRMADPAFFDDHEQARRGGEEHAMLTARIATLYEEWE 640

Query: 64  D 64
            
Sbjct: 641 S 641


>gi|237843561|ref|XP_002371078.1| plectin, putative [Toxoplasma gondii ME49]
 gi|211968742|gb|EEB03938.1| plectin, putative [Toxoplasma gondii ME49]
          Length = 3686

 Score = 38.6 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 76/305 (24%), Gaps = 20/305 (6%)

Query: 19   AVQRLSFLNTKTEDPHLWQNVIEAKMLMRER-QHLDNAISFIKEIQDRLCDNL------I 71
              + L+ +  +            A  L RE         +    +Q  L +         
Sbjct: 3173 KNEELAQVTAELAAQE-----EHAAALRRELEAQAQQFAASEATLQAALSEAEKKSLACE 3227

Query: 72   LLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQ 131
                   ++  +         +     V  ++ + + + EA+      E        +  
Sbjct: 3228 ARMREELQNHVAAASRIKAEEESRMQFVLEQEKKKVAAEEAEKLRKTFERLWDEESAKML 3287

Query: 132  DWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLV 191
                 + R           K E LE     EA  + A L      +      E+   R  
Sbjct: 3288 QAYEAVARQLAEAQRAMHAKGEELEEVKKREAEARRAALDATQEASEVQELREKLAARDA 3347

Query: 192  RISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDC--RIDTYRASGAGGQHV-NTTDS 248
             +S   S ++  T   +         + E          + DT        +        
Sbjct: 3348 ELSELRSANKEQTEELATVRANQTRLAEEAARQREALEKQRDTLEKEREVLRGQVEDAKD 3407

Query: 249  AVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGW 308
              R     T     C +     +        LR ++ E EL+  +      E        
Sbjct: 3408 RERERARQTEEQESCLRRALAEREDEARQKTLRLQVLEEELETEKHRNASAEKR-----R 3462

Query: 309  GRQIR 313
            G +IR
Sbjct: 3463 GEEIR 3467


>gi|297587287|ref|ZP_06945932.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Finegoldia magna ATCC 53516]
 gi|297575268|gb|EFH93987.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Finegoldia magna ATCC 53516]
          Length = 637

 Score = 38.6 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD-NAISFIK 60
           KL +Q+  +    + D   +R+  +        ++ +  +   L  E ++L+ +  S   
Sbjct: 565 KLRKQIETIES--NIDKIDERIKEIEDMFCQNDIYDDPKKILQLNEELENLNADKNSLYS 622

Query: 61  EIQDRLCDNLI 71
           + +D+  +   
Sbjct: 623 DWEDKQLEYED 633


>gi|172058791|ref|YP_001815251.1| ABC transporter related [Exiguobacterium sibiricum 255-15]
 gi|171991312|gb|ACB62234.1| ABC transporter related [Exiguobacterium sibiricum 255-15]
          Length = 633

 Score = 38.6 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 27/62 (43%), Gaps = 3/62 (4%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD-NAISFIKEI 62
            +QL  L    + +    R   +     +P ++ ++ +A  L  ER  +D + +  +++ 
Sbjct: 572 KQQLEQLEQ--EIERLENRSVEIEQLLCEPEVFNDIPKATALSAERDQIDVDLLELMEQW 629

Query: 63  QD 64
           + 
Sbjct: 630 ES 631


>gi|52840422|ref|YP_094221.1| peptide chain release factor [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52627533|gb|AAU26274.1| peptide chain release factor [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 136

 Score = 38.6 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 42/85 (49%)

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           +    + I E+D        SG GGQ ++ T S V + H+PTG+ V+CQ+ RS+  N+  
Sbjct: 12  EKMTNLHIYETDLSEKFILGSGKGGQKLHKTASTVYLKHLPTGMEVKCQESRSREDNRYF 71

Query: 276 AWNMLRAKLYELELQKREEIANIGE 300
           A   L  KL  +   ++ +     E
Sbjct: 72  ARQRLCEKLQAVFSDEKTKTQQRIE 96


>gi|55958422|emb|CAI16617.1| mitochondrial translational release factor 1 [Homo sapiens]
          Length = 226

 Score = 38.6 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 48/146 (32%), Gaps = 11/146 (7%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELA 76
           +N  +    L    +   +  N    + L R    L    +  +EIQ+       L  + 
Sbjct: 80  ENLSKEYQTLEQCLQHIPV--NEENRRSLNRRHAELAPLAAIYQEIQETEQAIEELESMC 137

Query: 77  LEEDDCSILQETSDNLQRIKLEVEYKQFES-------LLSGEADSNDAYLEVHAG--AGG 127
              +     Q     L+  +   +             +   + D ND  LEV AG   GG
Sbjct: 138 KSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVILEVTAGRTTGG 197

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTE 153
              Q +   +  MY  ++  + ++ E
Sbjct: 198 DICQQFTREIFDMYQNYSCYKHWQFE 223


>gi|330941932|ref|XP_003306099.1| hypothetical protein PTT_19132 [Pyrenophora teres f. teres 0-1]
 gi|311316572|gb|EFQ85807.1| hypothetical protein PTT_19132 [Pyrenophora teres f. teres 0-1]
          Length = 205

 Score = 38.6 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 28/83 (33%), Positives = 46/83 (55%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
              + + +SD   +  + SG GGQ +N T SAV++ HIPTG+VV+ Q  RS+  N+  A 
Sbjct: 20  PPRVPLPDSDLIENFLKGSGPGGQKINKTSSAVQLKHIPTGIVVKYQDTRSREINRKMAR 79

Query: 278 NMLRAKLYELELQKREEIANIGE 300
            +L+ ++ EL+L +         
Sbjct: 80  RILQDRIEELQLGEDARTRVRAR 102


>gi|16801244|ref|NP_471512.1| hypothetical protein lin2179 [Listeria innocua Clip11262]
 gi|16414692|emb|CAC97408.1| lin2179 [Listeria innocua Clip11262]
          Length = 650

 Score = 38.2 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 8/68 (11%), Positives = 29/68 (42%), Gaps = 6/68 (8%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFI 59
            R+L  +      +   ++++ L  +   P ++Q+  +A  + +E    +   +  +   
Sbjct: 583 KRKLEEVEKSM--EETDKKIAELELQLTKPEIFQDHEKAFEITQELDVVKARGEKLMEEW 640

Query: 60  KEIQDRLC 67
           +++ + L 
Sbjct: 641 EKVSEELE 648


>gi|282858138|ref|ZP_06267333.1| ABC transporter, ATP-binding protein [Pyramidobacter piscolens
           W5455]
 gi|282584060|gb|EFB89433.1| ABC transporter, ATP-binding protein [Pyramidobacter piscolens
           W5455]
          Length = 644

 Score = 38.2 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 8/67 (11%), Positives = 22/67 (32%), Gaps = 11/67 (16%)

Query: 15  DWDNAVQRLSFLN-------TKTEDPHLWQNVIEAKMLMRER----QHLDNAISFIKEIQ 63
           +     +R+  L         +   P +  +    + LM++       L+ A    +E+ 
Sbjct: 575 ELAALEERIDDLERRKGRDEKELCRPEVIADSNRIQTLMKDLADAGAELEAATGRWEELM 634

Query: 64  DRLCDNL 70
           + +    
Sbjct: 635 EIIEKIE 641


>gi|115378407|ref|ZP_01465569.1| peptidyl-tRNA hydrolase domain protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|310819398|ref|YP_003951756.1| peptidyl-tRNA hydrolase domain-containing protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|115364597|gb|EAU63670.1| peptidyl-tRNA hydrolase domain protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309392470|gb|ADO69929.1| Peptidyl-tRNA hydrolase domain protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 125

 Score = 38.2 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 32/99 (32%), Positives = 41/99 (41%), Gaps = 21/99 (21%)

Query: 226 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKL- 284
             C ++ + ASG GGQH NTT S VR+TH  T + V   + RSQ +NK  A   LR  L 
Sbjct: 24  KTCEVEYFIASGPGGQHRNTTASGVRLTHPSTELSVTATERRSQIQNKGVALERLREGLK 83

Query: 285 --------------------YELELQKREEIANIGESSK 303
                                 LE +K+E         K
Sbjct: 84  VLTFVPKVRRATKPTKGSQRRRLEGKKQESQKKALRGKK 122


>gi|312880801|ref|ZP_07740601.1| ABC transporter related protein [Aminomonas paucivorans DSM 12260]
 gi|310784092|gb|EFQ24490.1| ABC transporter related protein [Aminomonas paucivorans DSM 12260]
          Length = 659

 Score = 38.2 bits (87), Expect = 1.7,   Method: Composition-based stats.
 Identities = 8/54 (14%), Positives = 21/54 (38%), Gaps = 1/54 (1%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKEIQDRLCDNLIL 72
             R + +     DP +  +    + LM+E + L  ++    +E +    +   +
Sbjct: 605 EARKTQVEALLCDPAVLGDSSRVQDLMKELRLLQESLKTRYEEWEALSLEMEAI 658


>gi|302911185|ref|XP_003050437.1| hypothetical protein NECHADRAFT_84770 [Nectria haematococca mpVI
           77-13-4]
 gi|256731374|gb|EEU44724.1| hypothetical protein NECHADRAFT_84770 [Nectria haematococca mpVI
           77-13-4]
          Length = 186

 Score = 38.2 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/60 (40%), Positives = 38/60 (63%)

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           +      + SG GGQ +N T+SAV++ HIPTG+VV+ Q  RS+ +N+  A  +L  ++ E
Sbjct: 47  EIEESYVKGSGPGGQKINKTNSAVQLKHIPTGIVVKSQATRSRDQNRKHARELLAQRVDE 106


>gi|253680857|ref|ZP_04861660.1| ABC transporter, ATP-binding protein [Clostridium botulinum D str.
           1873]
 gi|253562706|gb|EES92152.1| ABC transporter, ATP-binding protein [Clostridium botulinum D str.
           1873]
          Length = 637

 Score = 38.2 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 7/53 (13%), Positives = 22/53 (41%), Gaps = 1/53 (1%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS-FIKEIQDRL 66
           D  +  + +  L  K     ++ +  +++ + +E    +N +     E ++ L
Sbjct: 585 DIASLEKDIEELQQKLCLEEIYSDPNKSEEVNKELLTKENKLELLYTEWEELL 637


>gi|148358384|ref|YP_001249591.1| peptide chain release factor [Legionella pneumophila str. Corby]
 gi|296105734|ref|YP_003617434.1| peptide chain release factor [Legionella pneumophila 2300/99 Alcoy]
 gi|148280157|gb|ABQ54245.1| peptide chain release factor [Legionella pneumophila str. Corby]
 gi|295647635|gb|ADG23482.1| peptide chain release factor [Legionella pneumophila 2300/99 Alcoy]
          Length = 136

 Score = 38.2 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 42/85 (49%)

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           +    + I E+D        SG GGQ ++ T S V + H+PTG+ V+CQ+ RS+  N+  
Sbjct: 12  EKMTNLHIYETDLSEKFILGSGKGGQKLHKTASTVYLKHLPTGMEVKCQESRSREDNRYF 71

Query: 276 AWNMLRAKLYELELQKREEIANIGE 300
           A   L  KL  +   ++ +     E
Sbjct: 72  ARQRLCEKLQAVFSDEKTKTQQRIE 96


>gi|265991894|ref|ZP_06104451.1| peptide chain release factor [Brucella melitensis bv. 1 str.
          Rev.1]
 gi|263002907|gb|EEZ15253.1| peptide chain release factor [Brucella melitensis bv. 1 str.
          Rev.1]
          Length = 133

 Score = 38.2 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/76 (14%), Positives = 29/76 (38%), Gaps = 5/76 (6%)

Query: 17 DNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
          D  ++R S + ++  + P    +      L  E   L + +  I+E+ D   +   L  +
Sbjct: 28 DQLLKRFSMIESQMANNP----DSDTYVKLASEYSELQDVVGKIRELSDARMEASDLAAM 83

Query: 76 ALEEDDCSILQETSDN 91
            +    + ++  +  
Sbjct: 84 RDDASTDAEMRALAVE 99


>gi|288958910|ref|YP_003449251.1| ABC transporter ATP-binding protein [Azospirillum sp. B510]
 gi|288911218|dbj|BAI72707.1| ABC transporter ATP-binding protein [Azospirillum sp. B510]
          Length = 609

 Score = 38.2 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/72 (13%), Positives = 22/72 (30%), Gaps = 7/72 (9%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPH-LWQNVIEAKMLMRER----QHLDNAISF 58
            R+L+ L    D       ++ L     DP    ++  + +    +       L  A   
Sbjct: 536 QRELDELPARMD--TLSAEIAKLEKLLADPDLFTRDAAKFQKTSEQLHARQAALATAEER 593

Query: 59  IKEIQDRLCDNL 70
             E++    +  
Sbjct: 594 WLELEAMREELE 605


>gi|85101373|ref|XP_961134.1| hypothetical protein NCU04174 [Neurospora crassa OR74A]
 gi|16944642|emb|CAD11402.1| conserved hypothetical protein [Neurospora crassa]
 gi|28922674|gb|EAA31898.1| predicted protein [Neurospora crassa OR74A]
          Length = 172

 Score = 38.2 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 25/68 (36%), Positives = 42/68 (61%)

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
                ++ E +      + SG GGQ +N T+SAV++ HIPT +V++CQ+ RS+ +N+  A
Sbjct: 1   MPPRPKLPEDELEEVYLKGSGPGGQKINKTNSAVQLRHIPTNIVIKCQETRSRTQNRKLA 60

Query: 277 WNMLRAKL 284
             +L AK+
Sbjct: 61  REILAAKV 68


>gi|241951644|ref|XP_002418544.1| conserved hypothetical protein [Candida dubliniensis CD36]
 gi|223641883|emb|CAX43846.1| conserved hypothetical protein [Candida dubliniensis CD36]
          Length = 171

 Score = 38.2 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 26/56 (46%), Positives = 36/56 (64%)

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           +   G GGQ +N ++S V++THIPTG+VV CQ  RSQ +N+A A   L  KL +  
Sbjct: 46  HGGRGPGGQKINKSNSKVQLTHIPTGMVVSCQATRSQEQNRAIAREKLALKLDDYY 101


>gi|322421144|ref|YP_004200367.1| ABC transporter-like protein [Geobacter sp. M18]
 gi|320127531|gb|ADW15091.1| ABC transporter related protein [Geobacter sp. M18]
          Length = 648

 Score = 38.2 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 8/62 (12%), Positives = 17/62 (27%), Gaps = 3/62 (4%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD-NAISFIKEI 62
            R+L  +            L+ L  K   P  + +   A+        L     +  +  
Sbjct: 588 ERKLTEIED--KIGTKEGELAKLEEKMAAPEFFADHEAARAAGERHAQLTAEIAALYEAW 645

Query: 63  QD 64
           + 
Sbjct: 646 ES 647


>gi|327393366|dbj|BAK10788.1| ABC transporter ATP-binding protein Uup [Pantoea ananatis AJ13355]
          Length = 639

 Score = 38.2 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/70 (14%), Positives = 25/70 (35%), Gaps = 7/70 (10%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNV-IEAKMLMRERQHLDNAISF--- 58
           L+R+L  L      +    R+  L  K   P  +     + + ++ E   ++  +     
Sbjct: 570 LTRELEQLPQ--KLEQLEARIGELQAKMSHPDFFSQPHDKTQPVLDELADVEQQLETAFA 627

Query: 59  -IKEIQDRLC 67
             +E++    
Sbjct: 628 RWEELESLRN 637


>gi|73662141|ref|YP_300922.1| ABC transporter ATPase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72494656|dbj|BAE17977.1| ATPase component of ABC transporter with duplicated ATPase domains
           [Staphylococcus saprophyticus subsp. saprophyticus ATCC
           15305]
          Length = 642

 Score = 38.2 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 31/69 (44%), Gaps = 6/69 (8%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAK--MLMRERQH--LDNAIS 57
           ++ RQ+       D +    +++ +N +   P ++    +A    + ++     L+  +S
Sbjct: 575 QIERQIETCEA--DIEQFEAQINEINEQLTLPDVYSTPEKANDLAISKQHTEQKLEQVMS 632

Query: 58  FIKEIQDRL 66
              E+Q++L
Sbjct: 633 EWAELQEKL 641


>gi|332283975|ref|YP_004415886.1| ABC transporter ATP-binding protein [Pusillimonas sp. T7-7]
 gi|330427928|gb|AEC19262.1| ABC transporter ATP-binding protein [Pusillimonas sp. T7-7]
          Length = 644

 Score = 38.2 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 24/81 (29%), Gaps = 12/81 (14%)

Query: 4   SRQLNCLGGLFDWDNAV---------QRLSFLNTKTEDPHLWQNVIEAK--MLMRERQHL 52
            ++L  L    D              QRL  LN    DP  + +    +   ++ E   L
Sbjct: 561 RQRLALLRKPLDAKLKKVDADMERAGQRLQVLNALIADPEFYSDARRDERLKVLEEHGEL 620

Query: 53  DNAISFI-KEIQDRLCDNLIL 72
                 + +E      +   L
Sbjct: 621 SKKHGQLEEEWLMLQEELEAL 641


>gi|226943534|ref|YP_002798607.1| ABC transporter ATP binding protein [Azotobacter vinelandii DJ]
 gi|226718461|gb|ACO77632.1| ABC transporter, ATP binding component [Azotobacter vinelandii DJ]
          Length = 639

 Score = 38.2 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 4/71 (5%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL R+L  + G    D     L+ L  +  DP  +Q    A         L++    +  
Sbjct: 573 KLQRELEAIPG--QIDALEAELAELQERIADPAFYQQP--AAQTAPLLARLESLQQELDR 628

Query: 62  IQDRLCDNLIL 72
           + +R  +    
Sbjct: 629 LLERWAELEEA 639


>gi|254555765|ref|YP_003062182.1| ABC transporter, ATP-binding protein [Lactobacillus plantarum JDM1]
 gi|254044692|gb|ACT61485.1| ABC transporter, ATP-binding protein [Lactobacillus plantarum JDM1]
          Length = 660

 Score = 38.2 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 5/47 (10%), Positives = 17/47 (36%), Gaps = 1/47 (2%)

Query: 8   NCLGGLF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53
             +  +F +     +R+  L  +  DP +  +    +  ++    + 
Sbjct: 85  EEMSSVFAELHAIEKRMHQLENQLSDPSIMNDEQAYQQTLKTYDQIQ 131


>gi|53715387|ref|YP_101379.1| ABC transporter ATP-binding protein [Bacteroides fragilis YCH46]
 gi|60683356|ref|YP_213500.1| putative ABC transporter ATP-binding protein [Bacteroides fragilis
           NCTC 9343]
 gi|253567409|ref|ZP_04844857.1| ABC transporter ATP-binding protein [Bacteroides sp. 3_2_5]
 gi|265768285|ref|ZP_06095544.1| ABC transporter ATP-binding protein [Bacteroides sp. 2_1_16]
 gi|52218252|dbj|BAD50845.1| ABC transporter ATP-binding protein [Bacteroides fragilis YCH46]
 gi|60494790|emb|CAH09596.1| putative ATP-binding component of ABC transporter [Bacteroides
           fragilis NCTC 9343]
 gi|251943791|gb|EES84330.1| ABC transporter ATP-binding protein [Bacteroides sp. 3_2_5]
 gi|263252220|gb|EEZ23768.1| ABC transporter ATP-binding protein [Bacteroides sp. 2_1_16]
 gi|301164843|emb|CBW24403.1| putative ATP-binding component of ABC transporter [Bacteroides
           fragilis 638R]
          Length = 651

 Score = 38.2 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 33/75 (44%), Gaps = 5/75 (6%)

Query: 2   KLSRQLNCLGGLF-DWDNAVQR----LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           +L++++  L  L  D + A+++    ++ L  K   P    ++   +   + +Q LD+ +
Sbjct: 576 ELNKKIKKLERLVADCEAAIEQTESAIAILEEKMATPDGASDMSLYEQHQKLKQQLDHTV 635

Query: 57  SFIKEIQDRLCDNLI 71
              + +   L +   
Sbjct: 636 EEWERVSMELEEMNE 650


>gi|85091004|ref|XP_958690.1| hypothetical protein NCU08921 [Neurospora crassa OR74A]
 gi|28920070|gb|EAA29454.1| predicted protein [Neurospora crassa OR74A]
 gi|28950290|emb|CAD70744.1| hypothetical protein [Neurospora crassa]
          Length = 1157

 Score = 38.2 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 8/56 (14%), Positives = 17/56 (30%), Gaps = 13/56 (23%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58
           L   L  +   F+      R+  L  +             + + + RQ  +  I+ 
Sbjct: 606 LKSNLKSIRAAFELQEIENRIEELEKQ-------------QKVNQRRQEAERDIAE 648


>gi|145250303|ref|XP_001396665.1| peptidyl-tRNA hydrolase domain protein [Aspergillus niger CBS
           513.88]
 gi|134082184|emb|CAL00939.1| unnamed protein product [Aspergillus niger]
          Length = 198

 Score = 38.2 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 28/70 (40%), Positives = 44/70 (62%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
              ++I ++D  +   + +G GGQ +N T+SAV+I H PTGVVV+ Q  RS+ +N+  A 
Sbjct: 40  PPRLKIQDADVTVSYLKGTGPGGQKINKTNSAVQIIHKPTGVVVKSQATRSRSQNEKIAR 99

Query: 278 NMLRAKLYEL 287
            +L  K+ EL
Sbjct: 100 QLLADKVEEL 109


>gi|322697002|gb|EFY88787.1| peptidyl-tRNA hydrolase domain protein [Metarhizium acridum CQMa
           102]
          Length = 187

 Score = 38.2 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 2/82 (2%)

Query: 213 PVVDDSIEIEISESDCRID--TYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           P   +         DC I+    + SG GGQ +N T+SAV++ H+PTG+VV+ Q  RS+ 
Sbjct: 28  PQSKNLPPRPKPPPDCEIEESFLKGSGPGGQKINKTNSAVQLKHVPTGIVVKSQATRSRS 87

Query: 271 KNKAQAWNMLRAKLYELELQKR 292
           +N+  A  +L  K+ +L   ++
Sbjct: 88  QNRKHARELLAQKVDDLLHGEQ 109


>gi|83859973|ref|ZP_00953493.1| hypothetical protein OA2633_08229 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83852332|gb|EAP90186.1| hypothetical protein OA2633_08229 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 603

 Score = 38.2 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 21/72 (29%), Gaps = 7/72 (9%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPH-LWQNVIEAKMLMRERQHLDN----AISF 58
              L  L G  + +     L+ L T+  D     +N        +E   L +        
Sbjct: 532 KHALETLPG--EIEKIEATLAKLETELADSTLFTKNPERFNAATKEHARLTDDKAAKEER 589

Query: 59  IKEIQDRLCDNL 70
             E++    +  
Sbjct: 590 WLELEMLREEIE 601


>gi|291616938|ref|YP_003519680.1| Uup [Pantoea ananatis LMG 20103]
 gi|291151968|gb|ADD76552.1| Uup [Pantoea ananatis LMG 20103]
          Length = 639

 Score = 38.2 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/67 (14%), Positives = 25/67 (37%), Gaps = 7/67 (10%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNV-IEAKMLMRERQHLDNAISF--- 58
           L+R+L  L      +    R+  L  K   P  +     + + ++ E   ++  +     
Sbjct: 570 LTRELEQLPQ--KLEQLEARIGELQAKMSHPDFFSQPHDKTQPVLDELADVEQQLETAFA 627

Query: 59  -IKEIQD 64
             +E++ 
Sbjct: 628 RWEELES 634


>gi|115379294|ref|ZP_01466406.1| ABC transporter, ATP-binding protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|310821039|ref|YP_003953397.1| ABC transporter ATP-binding protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115363704|gb|EAU62827.1| ABC transporter, ATP-binding protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309394111|gb|ADO71570.1| ABC transporter, ATP-binding protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 656

 Score = 38.2 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 15/68 (22%)

Query: 15  DWDNAVQRLSFLN-------TKTEDPHLWQNVIEAKMLM------RERQHLDNAISFIKE 61
           +     +R+S L         +  DP L+ +   AK LM      +E   L++  +  + 
Sbjct: 586 EIARIEERISKLETAQKEREAQLADPDLYNDFARAKPLMDTHRAGKE--ELESLYAAWEA 643

Query: 62  IQDRLCDN 69
            Q++L + 
Sbjct: 644 AQEKLAEA 651


>gi|227514364|ref|ZP_03944413.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus fermentum ATCC 14931]
 gi|227087230|gb|EEI22542.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus fermentum ATCC 14931]
          Length = 662

 Score = 38.2 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 28/71 (39%), Gaps = 6/71 (8%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER----QHLDNAIS 57
           KL R +  L      +   ++   + T+  DP +  ++ +   L +E     + L++   
Sbjct: 591 KLQRTVADLEEQM--NQLGEQQEQVETQMADPDVATDIGKLTDLQKELDALTKQLEDVEE 648

Query: 58  FIKEIQDRLCD 68
                 +RL +
Sbjct: 649 QWTAAAERLEE 659


>gi|189911793|ref|YP_001963348.1| peptidyl-tRNA hydrolase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167776469|gb|ABZ94770.1| Peptidyl-tRNA hydrolase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
          Length = 131

 Score = 38.2 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 3/79 (3%)

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
                + I ESD +    +ASG GGQ+VN   +AV + H+PTG  V+C   RSQ  N+ +
Sbjct: 20  KRMEALGIRESDLKEQFVKASGKGGQNVNKVATAVVLLHLPTGKQVKCSIYRSQGLNRYK 79

Query: 276 AWNMLRAKLYELELQKREE 294
           A ++L     ELE ++R E
Sbjct: 80  ARDLLC---LELEKEQRPE 95


>gi|24372474|ref|NP_716516.1| ABC transporter, ATP-binding protein [Shewanella oneidensis MR-1]
 gi|24346463|gb|AAN53961.1|AE015533_12 ABC transporter, ATP-binding protein [Shewanella oneidensis MR-1]
          Length = 637

 Score = 38.2 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 29/80 (36%), Gaps = 8/80 (10%)

Query: 2   KLSRQLNCLGGL-----FDWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLMRERQHLDN 54
           +L ++++ L         D     +RL+ L     D  L+   N  +   ++ ER  L  
Sbjct: 552 ELRQKVSPLKRKQAKLEIDQQKLSERLAELEHLLADGELYDQDNKAKLTSVLSERTSLTQ 611

Query: 55  AISFIK-EIQDRLCDNLILL 73
            +   + +  +   +   + 
Sbjct: 612 TLEESEMQWLELQEEIDTME 631


>gi|196230546|ref|ZP_03129408.1| Class I peptide chain release factor [Chthoniobacter flavus
           Ellin428]
 gi|196225476|gb|EDY19984.1| Class I peptide chain release factor [Chthoniobacter flavus
           Ellin428]
          Length = 132

 Score = 37.9 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 27/79 (34%), Positives = 38/79 (48%)

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           D      R+SG GGQHVN   +AV + H+P+G  V  Q  RSQ  N+  AW  L   + E
Sbjct: 24  DFEEKFSRSSGPGGQHVNKVSTAVMLRHVPSGAAVTVQDTRSQSMNRQLAWTRLLDAIEE 83

Query: 287 LELQKREEIANIGESSKTE 305
               +R    +  E  + +
Sbjct: 84  QRRAERAARRSEIEKKRRQ 102


>gi|54293184|ref|YP_125599.1| hypothetical protein lpl0230 [Legionella pneumophila str. Lens]
 gi|53753016|emb|CAH14459.1| hypothetical protein lpl0230 [Legionella pneumophila str. Lens]
          Length = 136

 Score = 37.9 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 43/85 (50%)

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
           +    + I E+D       +SG GGQ ++ T S V + H+PTG+ V+CQ+ RS+  N+  
Sbjct: 12  EKMTNLHIYETDLSEKFILSSGKGGQKLHKTASTVYLKHLPTGMEVKCQESRSREDNRYF 71

Query: 276 AWNMLRAKLYELELQKREEIANIGE 300
           A   L  KL  +   ++ +     E
Sbjct: 72  ARQRLCEKLQAVFSDEKTKTQQRIE 96


>gi|193215052|ref|YP_001996251.1| ABC transporter-like protein [Chloroherpeton thalassium ATCC 35110]
 gi|193088529|gb|ACF13804.1| ABC transporter-related protein [Chloroherpeton thalassium ATCC
           35110]
          Length = 647

 Score = 37.9 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 5/58 (8%), Positives = 18/58 (31%), Gaps = 11/58 (18%)

Query: 15  DWDNAVQRLSFLNT-------KTEDPHLWQNVIEAKMLMRER----QHLDNAISFIKE 61
           +     +++  L T       +  +P  + +  +++  + E       L+        
Sbjct: 587 EISKLERKIEELETKKSDYETQMAEPDFYADEKKSQKTLGEYERVTAELEKLYESWDA 644


>gi|257458160|ref|ZP_05623314.1| ABC transporter, ATP-binding protein [Treponema vincentii ATCC
           35580]
 gi|257444454|gb|EEV19543.1| ABC transporter, ATP-binding protein [Treponema vincentii ATCC
           35580]
          Length = 662

 Score = 37.9 bits (86), Expect = 2.2,   Method: Composition-based stats.
 Identities = 7/53 (13%), Positives = 22/53 (41%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLC 67
           +      ++  L T+   P ++ +  + + + ++ Q L    + + E  + L 
Sbjct: 610 ELAQTEDKIKELETQLASPEVYADGEKVRSVQQQIQALQENAAALTEQWEALN 662


>gi|312959622|ref|ZP_07774139.1| ABC transporter-like protein [Pseudomonas fluorescens WH6]
 gi|311286339|gb|EFQ64903.1| ABC transporter-like protein [Pseudomonas fluorescens WH6]
          Length = 639

 Score = 37.9 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 4/70 (5%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL R+L  L G  D D   Q+++ +  +  D   +Q    A    +    L+     ++ 
Sbjct: 574 KLQRELEALPG--DIDAKEQQIAAVEAEMADAGFYQRP--AAETAKVIASLEALNQELEV 629

Query: 62  IQDRLCDNLI 71
           + +R  +   
Sbjct: 630 LVERWAELDA 639


>gi|167039632|ref|YP_001662617.1| putative carbohydrate-binding protein [Thermoanaerobacter sp. X514]
 gi|300915119|ref|ZP_07132434.1| glycosyltransferase 36 [Thermoanaerobacter sp. X561]
 gi|307725042|ref|YP_003904793.1| glycosyltransferase 36 [Thermoanaerobacter sp. X513]
 gi|166853872|gb|ABY92281.1| putative carbohydrate binding [Thermoanaerobacter sp. X514]
 gi|300888843|gb|EFK83990.1| glycosyltransferase 36 [Thermoanaerobacter sp. X561]
 gi|307582103|gb|ADN55502.1| glycosyltransferase 36 [Thermoanaerobacter sp. X513]
          Length = 2887

 Score = 37.9 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/150 (9%), Positives = 49/150 (32%), Gaps = 8/150 (5%)

Query: 1    MKLSRQLNCLGGLFDWDNAVQRL--SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58
            ++L++ L     + + +   + +  + LN KT  P  W+  +    +  +    ++ +  
Sbjct: 1153 IELAKGLKDTIKMLNIEGITEDIFRNILNKKTLMPSDWE--VFLSKISEKLSSTEDEVGN 1210

Query: 59   IKEIQDRL----CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADS 114
            I+ +++ +     +    L     ++     +      +  +     K+ E +       
Sbjct: 1211 IERLKNIIGALKREMKEFLAWTEFDERQKEQEIFKRYKEVFEEHSSPKELEKVYKNYLLE 1270

Query: 115  NDAYLEVHAGAGGTESQDWANMLLRMYTRW 144
             +   E          +   + + R   + 
Sbjct: 1271 IEEVFEKATEEEKALLKSQKDKVARALEKI 1300


>gi|150388645|ref|YP_001318694.1| ABC transporter related [Alkaliphilus metalliredigens QYMF]
 gi|149948507|gb|ABR47035.1| ABC transporter related [Alkaliphilus metalliredigens QYMF]
          Length = 640

 Score = 37.9 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 7/51 (13%), Positives = 21/51 (41%), Gaps = 4/51 (7%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFIKE 61
           D     +RL+ L +      ++ +  +++ + +E    +Q L+      + 
Sbjct: 586 DILELEERLNALESLMCQEDIYTDPQKSREVHQETLTTKQSLEKLYEEWEN 636


>gi|187736226|ref|YP_001878338.1| peptide chain release factor [Akkermansia muciniphila ATCC BAA-835]
 gi|187426278|gb|ACD05557.1| peptide chain release factor [Akkermansia muciniphila ATCC BAA-835]
          Length = 120

 Score = 37.9 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 43/91 (47%)

Query: 215 VDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
            +    + I E D      R SG GGQ VN T++ V + H PTG+ V+C  +RS+  N+ 
Sbjct: 11  RERMEALGIREQDLEESFVRGSGRGGQKVNKTNNCVYLRHTPTGIAVKCHADRSRELNRF 70

Query: 275 QAWNMLRAKLYELELQKREEIANIGESSKTE 305
            A   L   + +++  +      + +  + +
Sbjct: 71  LARRELCDAVEQMQTGRCAARTRVIQRMRKQ 101


>gi|149278773|ref|ZP_01884908.1| fused predicted transporter subunit of ABC superfamily: ATP-binding
           component [Pedobacter sp. BAL39]
 gi|149230392|gb|EDM35776.1| fused predicted transporter subunit of ABC superfamily: ATP-binding
           component [Pedobacter sp. BAL39]
          Length = 559

 Score = 37.9 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 7/53 (13%), Positives = 22/53 (41%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
            G+ +    ++    +N +   P ++++    + LM  +  L + I  +   +
Sbjct: 94  EGVAEITAILKEYESINEQFGLPEVYEDADAMEKLMNRQGELQDKIDAVNAWE 146


>gi|120553410|ref|YP_957761.1| ABC transporter related [Marinobacter aquaeolei VT8]
 gi|120323259|gb|ABM17574.1| ABC transporter related protein [Marinobacter aquaeolei VT8]
          Length = 648

 Score = 37.9 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/57 (15%), Positives = 21/57 (36%), Gaps = 8/57 (14%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
           +   Q+L+ +     DP L+ +  + +        L   ++   E++  L D     
Sbjct: 584 EQLQQKLATVEHNLADPGLYDDQQKLR--------LKELLAEQTELKRELDDVEAEW 632


>gi|330808496|ref|YP_004352958.1| ABC transporter ATP-binding protein [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327376604|gb|AEA67954.1| Putative ABC transporter, ATP-binding component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 639

 Score = 37.9 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 4/70 (5%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL R+L  L G  D D   Q+++ +  +  D   +Q    A    +   HL+     +  
Sbjct: 574 KLQRELEALPG--DIDAKEQQIAAVEAEMADAGFYQRP--AAETAKVIAHLEQLQVELDA 629

Query: 62  IQDRLCDNLI 71
           + +R  +   
Sbjct: 630 LVERWAELDA 639


>gi|316976972|gb|EFV60157.1| nicotinamide phosphoribosyltransferase [Trichinella spiralis]
          Length = 544

 Score = 37.9 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 34/67 (50%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
             + E D         G GGQ+VN   + V + H+PTG+ V+  ++R   +N+  A   L
Sbjct: 412 PPLEEPDLEEKFVSGHGPGGQNVNKRQNCVFLRHVPTGLSVKVHEDRLLQRNRIIARVRL 471

Query: 281 RAKLYEL 287
           + KL +L
Sbjct: 472 QEKLDQL 478


>gi|148284146|ref|YP_001248236.1| ABC transporter, ATP-binding protein [Orientia tsutsugamushi str.
           Boryong]
 gi|146739585|emb|CAM79335.1| ABC transporter, ATP-binding protein [Orientia tsutsugamushi str.
           Boryong]
          Length = 601

 Score = 37.9 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 32/75 (42%), Gaps = 11/75 (14%)

Query: 2   KLSRQLN-CLGGLFD-----WDNAVQRLSFLNTKTEDPHLW-QNVIEAKMLMRERQ---- 50
           KLS +L+     + D           ++  L  K  DP+L+  N  +  +  +E +    
Sbjct: 525 KLSTKLSYKFQRMLDSIPKEITQLETQVEDLEKKLADPNLYQNNQDKFLLFSKELETSKL 584

Query: 51  HLDNAISFIKEIQDR 65
            ++   +  ++I++R
Sbjct: 585 RIEELFNTWQKIENR 599


>gi|299782881|gb|ADJ40879.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus fermentum CECT 5716]
          Length = 647

 Score = 37.9 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 28/71 (39%), Gaps = 6/71 (8%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER----QHLDNAIS 57
           KL R +  L      +   ++   + T+  DP +  ++ +   L +E     + L++   
Sbjct: 576 KLQRTVADLEEQM--NQLGEQQEQVETQMADPDVATDIGKLTDLQKELDALTKQLEDVEE 633

Query: 58  FIKEIQDRLCD 68
                 +RL +
Sbjct: 634 QWTAAAERLEE 644


>gi|149633371|ref|XP_001507092.1| PREDICTED: similar to My030 protein [Ornithorhynchus anatinus]
          Length = 217

 Score = 37.9 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 43/84 (51%)

Query: 201 RRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVV 260
           R       + +    D    + ++ES+      +  G GGQ  N T + V + HIP+G+V
Sbjct: 77  RPGRVQRPLQLAGKKDSQHLLVLNESELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIV 136

Query: 261 VQCQQERSQHKNKAQAWNMLRAKL 284
           V+C Q RS  +N+ +A  +L+ K+
Sbjct: 137 VKCHQTRSVDQNRKKAREILQEKV 160


>gi|308179741|ref|YP_003923869.1| ABC transporter, ATP-binding protein [Lactobacillus plantarum
           subsp. plantarum ST-III]
 gi|308045232|gb|ADN97775.1| ABC transporter, ATP-binding protein [Lactobacillus plantarum
           subsp. plantarum ST-III]
          Length = 660

 Score = 37.9 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 5/47 (10%), Positives = 17/47 (36%), Gaps = 1/47 (2%)

Query: 8   NCLGGLF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53
             +  +F +     +R+  L  +  DP +  +    +  ++    + 
Sbjct: 85  EEMSSVFAELHAIEKRMHQLENQLSDPAIMNDEQAYQQTLKTYDQIQ 131


>gi|255692713|ref|ZP_05416388.1| putative ABC transporter, ATP-binding protein [Bacteroides
           finegoldii DSM 17565]
 gi|260621548|gb|EEX44419.1| putative ABC transporter, ATP-binding protein [Bacteroides
           finegoldii DSM 17565]
          Length = 685

 Score = 37.9 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 9/74 (12%), Positives = 31/74 (41%), Gaps = 5/74 (6%)

Query: 2   KLSRQLNCL-GGLFDWDNAVQR----LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           +L++++  L   + D + +++     ++ +  K   P    ++   +   + +Q LD  +
Sbjct: 611 ELNKKIKKLERQVADCEASIEETEAAIAIVEEKMATPEGASDMQLYERHQKLKQQLDTIV 670

Query: 57  SFIKEIQDRLCDNL 70
              + +   L +  
Sbjct: 671 EEWERVSMELEEVK 684


>gi|255539765|ref|XP_002510947.1| conserved hypothetical protein [Ricinus communis]
 gi|223550062|gb|EEF51549.1| conserved hypothetical protein [Ricinus communis]
          Length = 205

 Score = 37.9 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 25/78 (32%), Gaps = 17/78 (21%)

Query: 3  LSRQLNCLGGLF-DW------------DNAVQRLSFLNTKTEDPHLWQNVIE---AKMLM 46
          L ++L  L     D              +  QRL FL T      +  +  +    + + 
Sbjct: 8  LQKKLQELESFLKDVFSLNPLDHNLHSQDIEQRLEFLKTLLSA-EITSSPEKPHHLQHIS 66

Query: 47 RERQHLDNAISFIKEIQD 64
          +    L++ +    + + 
Sbjct: 67 KRLSELESIVRDWHDYKT 84


>gi|195150095|ref|XP_002015990.1| GL10726 [Drosophila persimilis]
 gi|194109837|gb|EDW31880.1| GL10726 [Drosophila persimilis]
          Length = 181

 Score = 37.9 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 2/86 (2%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
            ++ ES+      R SG GGQ VN T + V + H+PT + ++C   R   KN+ +A  +L
Sbjct: 67  PKLQESEIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITIKCHTHRLASKNRVEARKLL 126

Query: 281 RAKLYELELQKR--EEIANIGESSKT 304
             KL      +        + E  K+
Sbjct: 127 LDKLDAHFNGENSIAAQIKVLEQRKS 152


>gi|289663375|ref|ZP_06484956.1| peptide chain release factor 2 [Xanthomonas campestris pv.
          vasculorum NCPPB702]
 gi|289668831|ref|ZP_06489906.1| peptide chain release factor 2 [Xanthomonas campestris pv.
          musacearum NCPPB4381]
          Length = 48

 Score = 37.9 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 20/40 (50%)

Query: 36 WQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
          W +   A+ L RER  L+  +  I ++   L D   LLEL
Sbjct: 2  WNDAERAQALGRERSMLEKTVIGIADVLSGLADAGDLLEL 41


>gi|253571378|ref|ZP_04848785.1| ABC transporter ATP-binding protein [Bacteroides sp. 1_1_6]
 gi|251839331|gb|EES67415.1| ABC transporter ATP-binding protein [Bacteroides sp. 1_1_6]
          Length = 680

 Score = 37.9 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/74 (13%), Positives = 31/74 (41%), Gaps = 5/74 (6%)

Query: 2   KLSRQLNCL-GGLFDWDNAVQR----LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           +L++++  L   + D + +++     ++ L  K   P    ++   +   + +Q LD  +
Sbjct: 606 ELNKKIKKLERQVADCEASIEETESAIAILEAKMATPEGASDMQLYERHQKLKQQLDTTV 665

Query: 57  SFIKEIQDRLCDNL 70
              + +   L +  
Sbjct: 666 EEWERVSMELEEVK 679


>gi|281207985|gb|EFA82163.1| hypothetical protein PPL_04583 [Polysphondylium pallidum PN500]
          Length = 2079

 Score = 37.9 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 36/122 (29%), Gaps = 7/122 (5%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNV-IEA-KMLMRERQHLDNAISF 58
           ++L   +  L       +  +R S L               +A + L RER  LD+    
Sbjct: 496 LQLKETIAGLES-----DLEKRSSELRETLSASESINTQMKKADEKLSRERSTLDSLTER 550

Query: 59  IKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAY 118
             ++     ++    +   ++   +  +       +  L+    +     +         
Sbjct: 551 YNKLNSEFEESDKHCKSLTQQIVETNEKLQLAEQAKQDLQSTNTKLNEDTAKLQSDLQER 610

Query: 119 LE 120
           +E
Sbjct: 611 VE 612


>gi|329735442|gb|EGG71731.1| ABC transporter, ATP-binding protein [Staphylococcus epidermidis
           VCU028]
          Length = 644

 Score = 37.9 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 5/55 (9%), Positives = 25/55 (45%), Gaps = 4/55 (7%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF----IKEIQDRL 66
            +    ++S +  +   P ++ + ++A     ++  ++  +       +++Q++L
Sbjct: 590 IEELEAQISHIEEQLTQPEVFNDPLKASKFANQKSDIEQKLEQIMLEWEKLQEKL 644


>gi|290953693|ref|ZP_06558314.1| hypothetical protein FtulhU_05096 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312967|ref|ZP_06803679.1| hypothetical protein FtulhU_05081 [Francisella tularensis subsp.
           holarctica URFT1]
          Length = 35

 Score = 37.9 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/19 (73%), Positives = 15/19 (78%)

Query: 300 ESSKTEIGWGRQIRSYVLQ 318
           E SK +IGWG QIRSYVL 
Sbjct: 1   EDSKADIGWGSQIRSYVLD 19


>gi|300767548|ref|ZP_07077458.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus plantarum subsp. plantarum ATCC 14917]
 gi|300494533|gb|EFK29691.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus plantarum subsp. plantarum ATCC 14917]
          Length = 660

 Score = 37.9 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 5/47 (10%), Positives = 17/47 (36%), Gaps = 1/47 (2%)

Query: 8   NCLGGLF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53
             +  +F +     +R+  L  +  DP +  +    +  ++    + 
Sbjct: 85  EEMSSVFAELHAIEKRMHQLENQLSDPAIMNDEQAYQQTLKTYDQIQ 131


>gi|203459047|ref|YP_002224203.1| gp204 [Mycobacterium phage ScottMcG]
 gi|197312494|gb|ACH62849.1| gp204 [Mycobacterium phage ScottMcG]
          Length = 118

 Score = 37.9 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 27/56 (48%), Positives = 37/56 (66%)

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           DC ++T R SG GGQ+ N  D+AVRI H P+G V + Q+ERSQ +NK  A+  +  
Sbjct: 13  DCVVETKRGSGKGGQNRNKRDTAVRIVHPPSGAVGESQEERSQLQNKKTAFRRMAE 68


>gi|28377587|ref|NP_784479.1| ABC transporter, ATP-binding protein [Lactobacillus plantarum
           WCFS1]
 gi|28270419|emb|CAD63322.1| ABC transporter, ATP-binding protein [Lactobacillus plantarum
           WCFS1]
          Length = 660

 Score = 37.9 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 5/47 (10%), Positives = 17/47 (36%), Gaps = 1/47 (2%)

Query: 8   NCLGGLF-DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53
             +  +F +     +R+  L  +  DP +  +    +  ++    + 
Sbjct: 85  EEMSSVFAELHAIEKRMHQLENQLSDPAIMNDEQAYQQTLKTYDQIQ 131


>gi|117921830|ref|YP_871022.1| ABC transporter-like protein [Shewanella sp. ANA-3]
 gi|117614162|gb|ABK49616.1| ABC transporter related [Shewanella sp. ANA-3]
          Length = 637

 Score = 37.9 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 22/62 (35%), Gaps = 3/62 (4%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLMRERQHLDNAISFIK-EIQDRLCDNLI 71
           D     +RL+ L     D  L+   N  +   ++ ER  L   +   + +  +   +   
Sbjct: 570 DQQKLSERLAELEHLLADSELYDQDNKAKLTSVLSERTSLTQTLEESEMQWLELQEEIDA 629

Query: 72  LL 73
           + 
Sbjct: 630 ME 631


>gi|284045996|ref|YP_003396336.1| ABC transporter [Conexibacter woesei DSM 14684]
 gi|283950217|gb|ADB52961.1| ABC transporter related protein [Conexibacter woesei DSM 14684]
          Length = 644

 Score = 37.9 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 19/54 (35%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
           + ++A   LS L  +  DP  W +                A+  +    +R+ D
Sbjct: 591 EIESAEAALSELEAELADPAAWADSERTAASSERHAAAKRAVEELYARYERVAD 644


>gi|68489326|ref|XP_711504.1| hypothetical protein CaO19.12943 [Candida albicans SC5314]
 gi|68489375|ref|XP_711480.1| hypothetical protein CaO19.5488 [Candida albicans SC5314]
 gi|46432785|gb|EAK92252.1| hypothetical protein CaO19.5488 [Candida albicans SC5314]
 gi|46432811|gb|EAK92277.1| hypothetical protein CaO19.12943 [Candida albicans SC5314]
 gi|238882388|gb|EEQ46026.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 171

 Score = 37.9 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 27/54 (50%), Positives = 36/54 (66%)

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYE 286
           +   G GGQ +N T+S V++THIPTG+VV CQ  RSQ +N+A A   L  KL +
Sbjct: 46  HGGRGPGGQKINKTNSKVQLTHIPTGMVVSCQATRSQEQNRAIAREKLALKLDD 99


>gi|70983422|ref|XP_747238.1| conserved hypothetical protein [Aspergillus fumigatus Af293]
 gi|66844864|gb|EAL85200.1| conserved hypothetical protein [Aspergillus fumigatus Af293]
 gi|159123756|gb|EDP48875.1| conserved hypothetical protein [Aspergillus fumigatus A1163]
          Length = 1142

 Score = 37.9 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 10/90 (11%), Positives = 28/90 (31%), Gaps = 7/90 (7%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL   +N L    +  N  ++   +     +   +      + L++ +  L+  ++ +K 
Sbjct: 554 KLKNTINELR--MELGNLEEKRKDIEESLAEAEKFN-----QELLQTKSELEGQVATLKT 606

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDN 91
                 +         +E+    L      
Sbjct: 607 NIKEAQEAHEQELERQKEERAEALANQKQE 636


>gi|315920342|ref|ZP_07916582.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides
           sp. D2]
 gi|313694217|gb|EFS31052.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides
           sp. D2]
          Length = 670

 Score = 37.9 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 9/74 (12%), Positives = 31/74 (41%), Gaps = 5/74 (6%)

Query: 2   KLSRQLNCL-GGLFDWDNAVQR----LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           +L++++  L   + D + +++     ++ +  K   P    ++   +   + +Q LD  +
Sbjct: 596 ELNKKIKKLERQVADCEASIEETESAIAIVEAKMATPEGASDMQLYERHQKLKQQLDGIV 655

Query: 57  SFIKEIQDRLCDNL 70
              + +   L +  
Sbjct: 656 EEWERVSMELEEAK 669


>gi|324558223|gb|ADY49829.1| Peptide chain release factor 1 [Ascaris suum]
          Length = 51

 Score = 37.9 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 23/48 (47%), Positives = 32/48 (66%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQH 270
           +  +  +I+T RASG GGQ+VN   +AVR+TH  +G+ V C  ER QH
Sbjct: 1   MPSNSVKIETMRASGPGGQNVNKRSTAVRVTHKSSGISVHCMDERFQH 48


>gi|224369062|ref|YP_002603226.1| hypothetical protein HRM2_19610 [Desulfobacterium autotrophicum
           HRM2]
 gi|223691779|gb|ACN15062.1| hypothetical protein HRM2_19610 [Desulfobacterium autotrophicum
           HRM2]
          Length = 118

 Score = 37.9 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 26/62 (41%), Positives = 37/62 (59%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           I+++D      + SG GGQ VN T  AV + H+PTG+ V+C  ERSQH N+  A   L  
Sbjct: 21  INKADIEEKFVKGSGRGGQKVNKTSVAVFLRHLPTGITVKCGSERSQHLNRFLALRRLVD 80

Query: 283 KL 284
           ++
Sbjct: 81  RI 82


>gi|293371621|ref|ZP_06618032.1| ABC transporter, ATP-binding protein [Bacteroides ovatus SD CMC 3f]
 gi|292633318|gb|EFF51888.1| ABC transporter, ATP-binding protein [Bacteroides ovatus SD CMC 3f]
          Length = 651

 Score = 37.9 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 9/74 (12%), Positives = 31/74 (41%), Gaps = 5/74 (6%)

Query: 2   KLSRQLNCL-GGLFDWDNAVQR----LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           +L++++  L   + D + +++     ++ +  K   P    ++   +   + +Q LD  +
Sbjct: 577 ELNKKIKKLERQVADCEASIEETESAIAIVEAKMATPEGASDMQLYERHQKLKQQLDGIV 636

Query: 57  SFIKEIQDRLCDNL 70
              + +   L +  
Sbjct: 637 EEWERVSMELEEAK 650


>gi|260172031|ref|ZP_05758443.1| ABC transporter ATP-binding protein [Bacteroides sp. D2]
          Length = 651

 Score = 37.9 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 9/74 (12%), Positives = 31/74 (41%), Gaps = 5/74 (6%)

Query: 2   KLSRQLNCL-GGLFDWDNAVQR----LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           +L++++  L   + D + +++     ++ +  K   P    ++   +   + +Q LD  +
Sbjct: 577 ELNKKIKKLERQVADCEASIEETESAIAIVEAKMATPEGASDMQLYERHQKLKQQLDGIV 636

Query: 57  SFIKEIQDRLCDNL 70
              + +   L +  
Sbjct: 637 EEWERVSMELEEAK 650


>gi|255718823|ref|XP_002555692.1| KLTH0G15158p [Lachancea thermotolerans]
 gi|238937076|emb|CAR25255.1| KLTH0G15158p [Lachancea thermotolerans]
          Length = 155

 Score = 37.9 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 11/84 (13%)

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE---- 288
           +   G GGQ +N  +S V++ H+P+G+VV+CQ+ RS+ +N+  A   L  ++ + +    
Sbjct: 42  HGGRGPGGQKINKCNSKVQLKHLPSGIVVECQETRSRDQNRKLAREKLALRIAQWQGGGG 101

Query: 289 -------LQKREEIANIGESSKTE 305
                  L + E      +  K++
Sbjct: 102 PVAREVALHEWERQGKRSKERKSK 125


>gi|304390874|ref|ZP_07372826.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Mobiluncus curtisii subsp. curtisii ATCC 35241]
 gi|304325757|gb|EFL93003.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Mobiluncus curtisii subsp. curtisii ATCC 35241]
          Length = 560

 Score = 37.9 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 53/193 (27%), Gaps = 14/193 (7%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            G+++    + R + ++ +  DP       +   LM E   L  AI              
Sbjct: 91  EGVWEIKAKLDRYNEISAQMADPD-----ADFDALMEEMGQLQEAIDAADAWDLDSQLEQ 145

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            +  L     D  +   +    +R+ L     +   LL  +  +N             ES
Sbjct: 146 AMDALRCPPADADVKTLSGGERRRVALCKLLLEAPDLLLLDEPTNHL---------DAES 196

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             W    L  Y             L+   G  A +    L     N   +L+ +Q    +
Sbjct: 197 VLWLEQHLSQYKGAVIAVTHDRYFLDHVAGWIAEVDRGHLYPYEGNYSTYLEKKQERLEV 256

Query: 191 VRISPYDSNSRRH 203
                     R  
Sbjct: 257 QGRKDAKLQKRLK 269


>gi|237719583|ref|ZP_04550064.1| ABC transporter ATP-binding protein [Bacteroides sp. 2_2_4]
 gi|298482501|ref|ZP_07000687.1| ABC transporter, ATP-binding protein [Bacteroides sp. D22]
 gi|229450852|gb|EEO56643.1| ABC transporter ATP-binding protein [Bacteroides sp. 2_2_4]
 gi|298271480|gb|EFI13055.1| ABC transporter, ATP-binding protein [Bacteroides sp. D22]
          Length = 651

 Score = 37.9 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 9/74 (12%), Positives = 31/74 (41%), Gaps = 5/74 (6%)

Query: 2   KLSRQLNCL-GGLFDWDNAVQR----LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           +L++++  L   + D + +++     ++ +  K   P    ++   +   + +Q LD  +
Sbjct: 577 ELNKKIKKLERQVADCEASIEETESAIAIVEAKMATPEGASDMQLYERHQKLKQQLDGIV 636

Query: 57  SFIKEIQDRLCDNL 70
              + +   L +  
Sbjct: 637 EEWERVSMELEEAK 650


>gi|154251352|ref|YP_001412176.1| ABC transporter-like protein [Parvibaculum lavamentivorans DS-1]
 gi|154155302|gb|ABS62519.1| ABC transporter related [Parvibaculum lavamentivorans DS-1]
          Length = 599

 Score = 37.9 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 10/71 (14%), Positives = 21/71 (29%), Gaps = 10/71 (14%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQ-NVIEAKMLMRERQHLDNAISFIK 60
           +L  ++  L          + +  +  K  DP L+  +       M     L   ++  +
Sbjct: 533 ELQTRMPEL---------AREIENVEKKLADPDLYARDPELFHKTMTRHDALKAELASAE 583

Query: 61  EIQDRLCDNLI 71
           E    L     
Sbjct: 584 EHWLELEMKRE 594


>gi|108757726|ref|YP_631538.1| ABC transporter ATP-binding protein [Myxococcus xanthus DK 1622]
 gi|108461606|gb|ABF86791.1| ABC transporter, ATP-binding protein [Myxococcus xanthus DK 1622]
          Length = 657

 Score = 37.9 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 27/68 (39%), Gaps = 15/68 (22%)

Query: 15  DWDNAVQRLSFLNT-------KTEDPHLWQNVIEAKMLM------RERQHLDNAISFIKE 61
           +      R++ +         +  DP L+ +   AK LM      +E   L++  +  + 
Sbjct: 587 EIAKLEARIAEVEAGQKEREAQLADPALYNDFARAKPLMDTHRASKE--ELEDLYARWEA 644

Query: 62  IQDRLCDN 69
            Q++L + 
Sbjct: 645 AQEKLAEA 652


>gi|254498257|ref|ZP_05110999.1| peptide chain release factor [Legionella drancourtii LLAP12]
 gi|254352506|gb|EET11299.1| peptide chain release factor [Legionella drancourtii LLAP12]
          Length = 135

 Score = 37.5 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 41/83 (49%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
             ++ I+E          SG GGQ ++ T S V + H+P+G+ ++CQ+ RS+  N+  A 
Sbjct: 14  MEKLHINEDSLIEKFIIGSGKGGQKLHKTASTVYLKHVPSGIEIKCQESRSREGNRYFAR 73

Query: 278 NMLRAKLYELELQKREEIANIGE 300
             L  K + +   ++ +     E
Sbjct: 74  VRLCEKYHAIISDEKTKEQQRVE 96


>gi|160885652|ref|ZP_02066655.1| hypothetical protein BACOVA_03655 [Bacteroides ovatus ATCC 8483]
 gi|156109274|gb|EDO11019.1| hypothetical protein BACOVA_03655 [Bacteroides ovatus ATCC 8483]
          Length = 651

 Score = 37.5 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 9/74 (12%), Positives = 31/74 (41%), Gaps = 5/74 (6%)

Query: 2   KLSRQLNCL-GGLFDWDNAVQR----LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           +L++++  L   + D + +++     ++ +  K   P    ++   +   + +Q LD  +
Sbjct: 577 ELNKKIKKLERQVADCEASIEETESAIAIVEAKMATPEGASDMQLYERHQKLKQQLDGIV 636

Query: 57  SFIKEIQDRLCDNL 70
              + +   L +  
Sbjct: 637 EEWERVSMELEEAK 650


>gi|187477916|ref|YP_785940.1| ABC transporter ATP-binding protein [Bordetella avium 197N]
 gi|115422502|emb|CAJ49027.1| ABC transporter ATP-binding protein [Bordetella avium 197N]
          Length = 640

 Score = 37.5 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 26/74 (35%), Gaps = 8/74 (10%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEA--KMLMRERQHLDNAI---- 56
           L  +L+ +    + +    RL  L+    D  L+ +      + +M E   L   +    
Sbjct: 566 LQARLSKVES--EMEKLRVRLQTLDALIADADLYSDARRTERQQVMAEHGELGKRMGTLE 623

Query: 57  SFIKEIQDRLCDNL 70
               EIQ  L +  
Sbjct: 624 EEWLEIQTSLEEID 637


>gi|29349217|ref|NP_812720.1| ABC transporter ATP-binding protein [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29341125|gb|AAO78914.1| ABC transporter ATP-binding protein [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 651

 Score = 37.5 bits (85), Expect = 2.8,   Method: Composition-based stats.
 Identities = 10/74 (13%), Positives = 31/74 (41%), Gaps = 5/74 (6%)

Query: 2   KLSRQLNCL-GGLFDWDNAVQR----LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           +L++++  L   + D + +++     ++ L  K   P    ++   +   + +Q LD  +
Sbjct: 577 ELNKKIKKLERQVADCEASIEETESAIAILEAKMATPEGASDMQLYERHQKLKQQLDTTV 636

Query: 57  SFIKEIQDRLCDNL 70
              + +   L +  
Sbjct: 637 EEWERVSMELEEVK 650


>gi|124009950|ref|ZP_01694615.1| ABC transporter, ATP-binding protein [Microscilla marina ATCC
           23134]
 gi|123984034|gb|EAY24412.1| ABC transporter, ATP-binding protein [Microscilla marina ATCC
           23134]
          Length = 642

 Score = 37.5 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 4/56 (7%), Positives = 20/56 (35%), Gaps = 4/56 (7%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI----SFIKEIQDRLCDNLI 71
            ++   +  K  D  ++ +  + +   +E   +   +       +E+  ++ +   
Sbjct: 585 EKKQEEIELKLADNTIYNDPEKLEKTQQEFAKVQEELAAANDAWEELVMKIDELEA 640


>gi|113969085|ref|YP_732878.1| ABC transporter-like protein [Shewanella sp. MR-4]
 gi|114048771|ref|YP_739321.1| ABC transporter-like protein [Shewanella sp. MR-7]
 gi|113883769|gb|ABI37821.1| ABC transporter related [Shewanella sp. MR-4]
 gi|113890213|gb|ABI44264.1| ABC transporter related [Shewanella sp. MR-7]
          Length = 637

 Score = 37.5 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 22/62 (35%), Gaps = 6/62 (9%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLMRERQHLDNAIS----FIKEIQDRLCD 68
           D     +RL+ L     D  L+   N  +   ++ ER  L   +        E+Q+ +  
Sbjct: 570 DQQKLSERLAELEHLLADSELYDQDNKAKLTSVLSERTSLTQTLEESEMQWLELQEEIDS 629

Query: 69  NL 70
             
Sbjct: 630 ME 631


>gi|294673355|ref|YP_003573971.1| ABC transporter ATP-binding protein [Prevotella ruminicola 23]
 gi|294473067|gb|ADE82456.1| ABC transporter, ATP-binding protein [Prevotella ruminicola 23]
          Length = 662

 Score = 37.5 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 24/73 (32%), Gaps = 5/73 (6%)

Query: 2   KLSRQLNCLGGLFD-----WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           +L ++ N L           +   QRL  L+     P    ++         ++ LD  +
Sbjct: 588 ELQKRKNRLEKAVKQHEAKIEQLEQRLKELDELLMQPENASDMTMVTEYTGIKRDLDEEV 647

Query: 57  SFIKEIQDRLCDN 69
              ++  + L   
Sbjct: 648 ERWEKASEELESL 660


>gi|184154799|ref|YP_001843139.1| ABC transporter ATP-binding component [Lactobacillus fermentum IFO
           3956]
 gi|183226143|dbj|BAG26659.1| ABC transporter ATP-binding component [Lactobacillus fermentum IFO
           3956]
          Length = 647

 Score = 37.5 bits (85), Expect = 2.9,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 25/60 (41%), Gaps = 2/60 (3%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL R +  L      +   ++   + T+  DP +  ++ +   L +E   L   +  ++E
Sbjct: 576 KLQRTVADLEEQM--NQLGEQQEQVETQMADPDVATDIGKLTDLQKELDALTKQLEDVEE 633


>gi|302335693|ref|YP_003800900.1| ABC transporter related protein [Olsenella uli DSM 7084]
 gi|301319533|gb|ADK68020.1| ABC transporter related protein [Olsenella uli DSM 7084]
          Length = 671

 Score = 37.5 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 18/58 (31%), Gaps = 2/58 (3%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
            R+L  +    +      R   L        L+ +       M E   L   I+ ++E
Sbjct: 601 RRRLRQVESALEPAQ--TRYQELMELMASEELYADAARFDQCMGEYNALSKKIASLEE 656


>gi|296126911|ref|YP_003634163.1| AAA ATPase [Brachyspira murdochii DSM 12563]
 gi|296018727|gb|ADG71964.1| AAA ATPase [Brachyspira murdochii DSM 12563]
          Length = 1284

 Score = 37.5 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 22/218 (10%), Positives = 60/218 (27%), Gaps = 2/218 (0%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALE 78
              +++ +  K  D  +  +  + + L +E +++   IS +K     L +    L     
Sbjct: 682 LKSKMNEIRDKMSDADISDD--DYEKLSKEFRNIKKEISQLKNNSFELKETYKALLDESI 739

Query: 79  EDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLL 138
             + +  + T+   + I   +   +    +    +      +        +  +     L
Sbjct: 740 IKEYNDTKNTNIIKECIDKNILKIEKIKNVFNNIEEYSNTYKYSLKEEDIKELENNFKSL 799

Query: 139 RMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDS 198
           +   +  ++ +           ++         I        +       R    +  +S
Sbjct: 800 QGRIKIIDEEEINLRNSINDTNKKIRNIKKETNIPENTPNSEIYNVLSSKRDEAKTLLES 859

Query: 199 NSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRAS 236
                  F S                E++   DTY  S
Sbjct: 860 QKEFRDKFGSFIKDFNERLEHVDINYENEYFKDTYINS 897


>gi|198276135|ref|ZP_03208666.1| hypothetical protein BACPLE_02324 [Bacteroides plebeius DSM 17135]
 gi|198270947|gb|EDY95217.1| hypothetical protein BACPLE_02324 [Bacteroides plebeius DSM 17135]
          Length = 644

 Score = 37.5 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 8/74 (10%), Positives = 28/74 (37%), Gaps = 5/74 (6%)

Query: 2   KLSRQLNCLGG-LFDWDNAVQRLSF----LNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           +L++++  L   + D +  +++L      L  +   P    ++   +   + ++ +  A 
Sbjct: 571 ELNKKIRKLEKQVADCEAKIEKLEEQVAQLEEQMATPEGASDMKLYEQHQQLKKQIAEAE 630

Query: 57  SFIKEIQDRLCDNL 70
                +   L +  
Sbjct: 631 EEWTLLLSELEEMK 644


>gi|242241814|ref|ZP_04796259.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Staphylococcus epidermidis W23144]
 gi|242234732|gb|EES37043.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Staphylococcus epidermidis W23144]
          Length = 644

 Score = 37.5 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 6/55 (10%), Positives = 25/55 (45%), Gaps = 4/55 (7%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQH----LDNAISFIKEIQDRL 66
            +    ++S +  +   P ++ + ++A     ++      L+  +   +++Q++L
Sbjct: 590 IEELESQISHIEEQLTQPEVFNDPLKASKFANQKSETEQKLEQIMLEWEKLQEKL 644


>gi|298345317|ref|YP_003718004.1| ABC transporter ATP-binding protein [Mobiluncus curtisii ATCC
           43063]
 gi|298235378|gb|ADI66510.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Mobiluncus curtisii ATCC 43063]
          Length = 560

 Score = 37.5 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 54/193 (27%), Gaps = 14/193 (7%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            G+++  + + R + ++ +  DP       +   LM E   L  AI              
Sbjct: 91  EGVWEIKSKLDRYNEISAQMADPD-----ADFDALMEEMGQLQEAIDAADAWDLDSQLEQ 145

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            +  L     D  +   +    +R+ L     +   LL  +  +N             ES
Sbjct: 146 AMDALRCPPADADVKTLSGGERRRVALCKLLLEAPDLLLLDEPTNHL---------DAES 196

Query: 131 QDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRL 190
             W    L  Y             L+   G  A +    L     N   +L+ +Q    +
Sbjct: 197 VLWLEQHLSQYKGAVIAVTHDRYFLDHVAGWIAEVDRGHLYPYEGNYSTYLEKKQERLEV 256

Query: 191 VRISPYDSNSRRH 203
                     R  
Sbjct: 257 QGRKDAKLQKRLK 269


>gi|147903393|ref|NP_001090775.1| integrin, beta 6 [Xenopus (Silurana) tropicalis]
 gi|134023735|gb|AAI35122.1| LOC100037861 protein [Xenopus (Silurana) tropicalis]
          Length = 696

 Score = 37.5 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 26/219 (11%), Positives = 49/219 (22%), Gaps = 9/219 (4%)

Query: 52  LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGE 111
           L   I+  KE++  +   L +L               ++       + ++ +    +S  
Sbjct: 361 LQLIINAYKELRSEIE--LEVLGDTEGLSLSFTALCNNNTAIPHSKKCQHLKVGDRVSFS 418

Query: 112 ADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLL 171
                A  E H      +       L          +  + E           ++    +
Sbjct: 419 VSITSASCEKHTRHIVIKPVGLEESLEVEIQSECSCQCHREERSSECSKGNGALECGVCV 478

Query: 172 IKGPNAYGWLKGEQGVHRLVRISPYDS-NSRRHTSFSSIWVYPVVDDSIEIEISESDCRI 230
              P      +  +G          DS   R          YP V   I           
Sbjct: 479 CYPPYLGDHCQCNEGSLNSSSCKELDSCGGRGECYCGQCICYPSVYGRI---YGSHCECD 535

Query: 231 DTYRASGAG---GQHVNTTDSAVRITHIPTGVVVQCQQE 266
           D       G     H +            +G    C  +
Sbjct: 536 DFSCLRHRGVICAGHGDCECGECICHSGWSGSYCNCTMD 574


>gi|15614867|ref|NP_243170.1| nucleotide sugar epimerase [Bacillus halodurans C-125]
 gi|10174924|dbj|BAB06023.1| nucleotide sugar epimerase [Bacillus halodurans C-125]
          Length = 315

 Score = 37.5 bits (85), Expect = 3.0,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 8/70 (11%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTEDP-HLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
           ++ L  +F  D    +L FL     +P   W ++ +A+ L+R        +  ++ I+  
Sbjct: 252 ISMLESIFQKDA---KLQFLEKPFGEPMSTWADISKAEKLLR----YSPNVPLLQGIEKE 304

Query: 66  LCDNLILLEL 75
           + D L L ++
Sbjct: 305 VDDLLDLYQI 314


>gi|260663173|ref|ZP_05864065.1| ABC transporter ATP-binding component [Lactobacillus fermentum
           28-3-CHN]
 gi|260552365|gb|EEX25416.1| ABC transporter ATP-binding component [Lactobacillus fermentum
           28-3-CHN]
          Length = 647

 Score = 37.5 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 25/60 (41%), Gaps = 2/60 (3%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL R +  L      +   ++   + T+  DP +  ++ +   L +E   L   +  ++E
Sbjct: 576 KLQRTVADLEEQM--NQLGEQQEQVETQMADPDVATDIGKLTDLQKELDALTKQLEDVEE 633


>gi|331084080|ref|ZP_08333187.1| hypothetical protein HMPREF0992_02111 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330402442|gb|EGG82012.1| hypothetical protein HMPREF0992_02111 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 636

 Score = 37.5 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 20/51 (39%), Gaps = 4/51 (7%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQH----LDNAISFIKEI 62
            +    R S ++ +   P +  NV E   L +E+      L+      +E+
Sbjct: 584 IEELETRDSEIDEEMAKPEVATNVAECVRLSKEKAEIAQKLEELYEKWEEL 634


>gi|227513690|ref|ZP_03943739.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus buchneri ATCC 11577]
 gi|227083009|gb|EEI18321.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus buchneri ATCC 11577]
          Length = 652

 Score = 37.5 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 32/73 (43%), Gaps = 6/73 (8%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---- 57
           KL+R++  L      D   +  + + ++   P ++ ++ +A  L ++ + +D  I     
Sbjct: 582 KLNREVTDLES--QLDELSKSKNNIESQMAQPEVFNDLDKASDLQKKLEMIDQKIKETES 639

Query: 58  FIKEIQDRLCDNL 70
             ++   +L D  
Sbjct: 640 KWEQKSLQLEDIE 652


>gi|260587629|ref|ZP_05853542.1| ABC transporter, ATP-binding protein [Blautia hansenii DSM 20583]
 gi|260541894|gb|EEX22463.1| ABC transporter, ATP-binding protein [Blautia hansenii DSM 20583]
          Length = 636

 Score = 37.5 bits (85), Expect = 3.1,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 20/51 (39%), Gaps = 4/51 (7%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQH----LDNAISFIKEI 62
            +    R S ++ +   P +  NV E   L +E+      L+      +E+
Sbjct: 584 IEELETRDSEIDEEMAKPEVATNVAECVRLSKEKAEIAQKLEELYEKWEEL 634


>gi|320104951|ref|YP_004180542.1| ABC transporter-like protein [Isosphaera pallida ATCC 43644]
 gi|319752233|gb|ADV63993.1| ABC transporter related protein [Isosphaera pallida ATCC 43644]
          Length = 644

 Score = 37.5 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 20/54 (37%), Gaps = 1/54 (1%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKEIQDRLC 67
           D  +A  +L+ L  +  DP  ++N   AK        L   +       ++ L 
Sbjct: 588 DIAHAEAQLAELEVQLADPETYKNPERAKACKLRHDQLTADLERLYAHWEEALE 641


>gi|291522361|emb|CBK80654.1| ATPase components of ABC transporters with duplicated ATPase
           domains [Coprococcus catus GD/7]
          Length = 645

 Score = 37.5 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 27/69 (39%), Gaps = 1/69 (1%)

Query: 4   SRQLNCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
            ++ N L    +  D    RL  L+       ++ NV     + +E++ LD     + E+
Sbjct: 574 RKRKNQLKKTMERIDAIDARLKELDELLVQEDVYTNVSRLMEINKEKEALDEEQLTLMEL 633

Query: 63  QDRLCDNLI 71
            + L  +  
Sbjct: 634 WEELEGDDD 642


>gi|255725070|ref|XP_002547464.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
 gi|240135355|gb|EER34909.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
          Length = 172

 Score = 37.5 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 45/102 (44%)

Query: 187 VHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTT 246
           +   V+      ++     ++   +  +      +   E       +   G GGQ +N  
Sbjct: 1   MFNRVQSLQRQLSTSTRVFYAIPKINKLPPRPKHLIKEEELEEKFLHGGRGPGGQKINKC 60

Query: 247 DSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
           +S V++ HIPTG+V+ CQ  RS+ +N+A A   L  KL +  
Sbjct: 61  NSKVQLKHIPTGIVIDCQATRSKEQNRAIAREKLALKLDDYY 102


>gi|299147511|ref|ZP_07040576.1| ABC transporter, ATP-binding protein [Bacteroides sp. 3_1_23]
 gi|298514789|gb|EFI38673.1| ABC transporter, ATP-binding protein [Bacteroides sp. 3_1_23]
          Length = 651

 Score = 37.5 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 9/74 (12%), Positives = 31/74 (41%), Gaps = 5/74 (6%)

Query: 2   KLSRQLNCL-GGLFDWDNAVQR----LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           +L++++  L   + D + +++     ++ +  K   P    ++   +   + +Q LD  +
Sbjct: 577 ELNKKIKKLERQVADCEASIEETESAIAIVEAKMATPEGASDMQLYERHQKLKQQLDGIV 636

Query: 57  SFIKEIQDRLCDNL 70
              + +   L +  
Sbjct: 637 EEWERVSMELEETK 650


>gi|228474487|ref|ZP_04059221.1| ATP-binding ABC transporter protein [Staphylococcus hominis SK119]
 gi|228271571|gb|EEK12931.1| ATP-binding ABC transporter protein [Staphylococcus hominis SK119]
          Length = 645

 Score = 37.5 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 30/56 (53%), Gaps = 6/56 (10%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEA-----KMLMRERQHLDNAISFIKEIQDRL 66
            +   + ++ ++ +   P ++ + I+A     + L  E Q L+N ++  +E+Q+++
Sbjct: 591 IEKYEEHITQIDQQLTQPDIFNDPIKANELAEQKLSIE-QQLENVMAEWEELQEKI 645


>gi|228476899|ref|ZP_04061544.1| ABC transporter ATP binding protein [Streptococcus salivarius
           SK126]
 gi|228251473|gb|EEK10618.1| ABC transporter ATP binding protein [Streptococcus salivarius
           SK126]
          Length = 639

 Score = 37.5 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 29/70 (41%), Gaps = 9/70 (12%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL----DNAIS 57
           KLSR++  +    + +   +RL  ++    +     +V E   L +E   L    +  + 
Sbjct: 574 KLSRRIEQIEN--ELETIEERLEEISAAMLE---TNDVAELSDLQKELDDLSVSQEALME 628

Query: 58  FIKEIQDRLC 67
              ++ ++L 
Sbjct: 629 EWSDLSEQLE 638


>gi|311748330|ref|ZP_07722115.1| ABC transporter, ATP-binding protein [Algoriphagus sp. PR1]
 gi|126576838|gb|EAZ81086.1| ABC transporter, ATP-binding protein [Algoriphagus sp. PR1]
          Length = 559

 Score = 37.5 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 37/103 (35%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           N ++    +N K  DP L ++      L+  +  +   +      +  +  +  +  L L
Sbjct: 101 NLLKEFEEINEKFMDPALMEDPDAMNKLIERQGEVQEKLDAANAWELDVMLDKAMDALRL 160

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
              D ++   +    +R+ L     Q   +L  +  +N    E
Sbjct: 161 PPSDANVENLSGGEKRRVALCRLLLQEPDVLLLDEPTNHLDAE 203


>gi|108756949|ref|YP_630627.1| ABC transporter ATP-binding protein [Myxococcus xanthus DK 1622]
 gi|108460829|gb|ABF86014.1| ABC transporter, ATP-binding protein [Myxococcus xanthus DK 1622]
          Length = 642

 Score = 37.5 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 3/57 (5%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
            + A  R + L  +  DP ++ N  +   + +E   LD A++ +  +  R  +   L
Sbjct: 584 IEAAESRKAGLEAQLADPAVYSNGPKVAEVQKE---LDAAVAEVDRLYTRWQELQDL 637


>gi|126651454|ref|ZP_01723658.1| ABC transporter (ATP-binding protein) [Bacillus sp. B14905]
 gi|126591707|gb|EAZ85803.1| ABC transporter (ATP-binding protein) [Bacillus sp. B14905]
          Length = 647

 Score = 37.5 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 26/77 (33%), Gaps = 1/77 (1%)

Query: 8   NCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
           + +  +F+      Q L  L  +  DP +++N      +M E   L +        Q   
Sbjct: 85  DEMMTIFEPLLAQEQTLRSLEQQMADPTVYENPTLYAKVMSEYDQLQHTFKDAGGYQYES 144

Query: 67  CDNLILLELALEEDDCS 83
               +L  +    +D  
Sbjct: 145 DIRSVLHGMQFYPEDYD 161


>gi|314935996|ref|ZP_07843345.1| ABC transporter, ATP-binding protein [Staphylococcus hominis subsp.
           hominis C80]
 gi|313655813|gb|EFS19556.1| ABC transporter, ATP-binding protein [Staphylococcus hominis subsp.
           hominis C80]
          Length = 645

 Score = 37.5 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 30/56 (53%), Gaps = 6/56 (10%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEA-----KMLMRERQHLDNAISFIKEIQDRL 66
            +   + ++ ++ +   P ++ + I+A     + L  E Q L+N ++  +E+Q+++
Sbjct: 591 IEKYEEHITQIDQQLTQPDIFNDPIKANELAEQKLSIE-QQLENVMAEWEELQEKI 645


>gi|323340147|ref|ZP_08080411.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus ruminis ATCC 25644]
 gi|323092338|gb|EFZ34946.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus ruminis ATCC 25644]
          Length = 650

 Score = 37.5 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 9/73 (12%), Positives = 26/73 (35%), Gaps = 3/73 (4%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L R +     L   +    + + L  +   P  + ++ +   L  + Q +   ++  +E
Sbjct: 579 RLKRSVEEFEQL--VEKLDAQKNDLENQMSSPENYNDLEKMGELQAKLQEISKKLAEAEE 636

Query: 62  -IQDRLCDNLILL 73
             +    +    L
Sbjct: 637 NWEQASMELEEFL 649


>gi|237715209|ref|ZP_04545690.1| ABC transporter ATP-binding protein [Bacteroides sp. D1]
 gi|262405054|ref|ZP_06081604.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294645143|ref|ZP_06722867.1| ABC transporter, ATP-binding protein [Bacteroides ovatus SD CC 2a]
 gi|294808700|ref|ZP_06767434.1| ABC transporter, ATP-binding protein [Bacteroides xylanisolvens SD
           CC 1b]
 gi|229444518|gb|EEO50309.1| ABC transporter ATP-binding protein [Bacteroides sp. D1]
 gi|262355929|gb|EEZ05019.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292639526|gb|EFF57820.1| ABC transporter, ATP-binding protein [Bacteroides ovatus SD CC 2a]
 gi|294444139|gb|EFG12872.1| ABC transporter, ATP-binding protein [Bacteroides xylanisolvens SD
           CC 1b]
          Length = 651

 Score = 37.5 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 9/74 (12%), Positives = 31/74 (41%), Gaps = 5/74 (6%)

Query: 2   KLSRQLNCL-GGLFDWDNAVQR----LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           +L++++  L   + D + +++     ++ +  K   P    ++   +   + +Q LD  +
Sbjct: 577 ELNKKIKKLERQVADCEASIEETESAIAIVEAKMATPEGASDMQLYERHQKLKQQLDGIV 636

Query: 57  SFIKEIQDRLCDNL 70
              + +   L +  
Sbjct: 637 EEWERVSMELEETK 650


>gi|89100197|ref|ZP_01173064.1| ABC transporter ATP-binding protein uup [Bacillus sp. NRRL B-14911]
 gi|89085047|gb|EAR64181.1| ABC transporter ATP-binding protein uup [Bacillus sp. NRRL B-14911]
          Length = 639

 Score = 37.5 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 17/47 (36%), Gaps = 1/47 (2%)

Query: 8   NCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53
           + +  +F         L  L  +  DP  + +    + +++E   L 
Sbjct: 85  DEMLSVFKGLREMEAELRRLEERMADPGAFNDPGSYEKILKEYDLLQ 131


>gi|332701205|ref|ZP_08421293.1| ABC transporter related protein [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332551354|gb|EGJ48398.1| ABC transporter related protein [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 657

 Score = 37.5 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 8/60 (13%), Positives = 20/60 (33%), Gaps = 4/60 (6%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF----IKEIQDRLCDNL 70
           + ++ + R + L T   DP  +    E   L  E +               +++ + +  
Sbjct: 588 ELESIMARQTELETLLADPATYSKTEEFVRLTSEYKQAKEREEQLFMDFSSLEESITELE 647


>gi|302346561|ref|YP_003814859.1| DNA gyrase, A subunit [Prevotella melaninogenica ATCC 25845]
 gi|302150295|gb|ADK96556.1| DNA gyrase, A subunit [Prevotella melaninogenica ATCC 25845]
          Length = 859

 Score = 37.5 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 16/157 (10%), Positives = 37/157 (23%), Gaps = 9/157 (5%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
           +L+ L G    D   Q    L    +D   +  N    K +M+E   L        +++ 
Sbjct: 430 RLSQLTG-LRLDQLHQEFEELMQTIKDLQEILNNPERCKEVMKE--ELQEVKEKYGDVRR 486

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
                  ++    E +           +    L    +   +    +A            
Sbjct: 487 T-----EIIPDEHEFNAEDFYPNDPVVITISHLGYIKRTPLADFKEQARGGVGSKGARTR 541

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
                   +   + +    +  K +            
Sbjct: 542 EKDFTEYIYPATMHQTMLFFTRKGRCYWMKCYDIPEG 578


>gi|254582148|ref|XP_002497059.1| ZYRO0D14476p [Zygosaccharomyces rouxii]
 gi|238939951|emb|CAR28126.1| ZYRO0D14476p [Zygosaccharomyces rouxii]
          Length = 155

 Score = 37.5 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 12/85 (14%)

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAK--------- 283
           +   G GGQ +N  +S V++ H+PTG+VV+CQQ RS+ +N+  A   L  +         
Sbjct: 40  HGGRGPGGQKINKCNSKVQLKHLPTGIVVECQQTRSRDQNRKIAREKLALEIERANTPGQ 99

Query: 284 ---LYELELQKREEIANIGESSKTE 305
              + E  LQ+  + +   +  K +
Sbjct: 100 SGTIREKALQQWHQQSKKSKERKAK 124


>gi|160933764|ref|ZP_02081152.1| hypothetical protein CLOLEP_02625 [Clostridium leptum DSM 753]
 gi|156867641|gb|EDO61013.1| hypothetical protein CLOLEP_02625 [Clostridium leptum DSM 753]
          Length = 637

 Score = 37.5 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 10/74 (13%), Positives = 25/74 (33%), Gaps = 6/74 (8%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL----DNAIS 57
           KL  ++       + D   +  + L  +  DP    +  +A  L +  + L    +  + 
Sbjct: 565 KLKTRVRRAEE--EIDGLDRETAELAGRLSDPETASDYEKALELTQRMEELRARQEKLME 622

Query: 58  FIKEIQDRLCDNLI 71
             + +   L +   
Sbjct: 623 SWEALCQELEEKEA 636


>gi|124359162|gb|ABN05685.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 1223

 Score = 37.1 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 7/55 (12%)

Query: 5   RQLNCLGGLFD---WDNAVQRLSFLNTKTEDPHLWQ----NVIEAKMLMRERQHL 52
             +  LGG FD        + +S L  +  +  LW     +    K + +E   L
Sbjct: 248 EDIKQLGGAFDNHNLGKLKKEISRLEERMNNQSLWSGNDEDRCRLKRIEKEHGEL 302


>gi|152975400|ref|YP_001374917.1| ABC transporter-related protein [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152024152|gb|ABS21922.1| ABC transporter-related protein [Bacillus cytotoxicus NVH 391-98]
          Length = 630

 Score = 37.1 bits (84), Expect = 3.7,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 25/62 (40%), Gaps = 5/62 (8%)

Query: 15  DWDNAVQRLSFLNTKTED-----PHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDN 69
           +WD    +++ L  K E       ++  +  +A+ L   ++ L+  +    E    L D 
Sbjct: 566 EWDTIEDKIAELEEKLEAVGEELANVGSDFTKAQELAEAQEQLEEQLEKAMERWSELSDI 625

Query: 70  LI 71
           + 
Sbjct: 626 VE 627


>gi|330685714|gb|EGG97352.1| hypothetical protein SEVCU121_0789 [Staphylococcus epidermidis
          VCU121]
          Length = 34

 Score = 37.1 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 5/34 (14%), Positives = 16/34 (47%)

Query: 29 KTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
             +P+ W +   A+ ++ +   L + ++   E+
Sbjct: 1  MMTEPNFWDDQNRAQDIIDKNNALKSMVNGYYEL 34


>gi|299534446|ref|ZP_07047779.1| ABC transporter ATP-binding protein [Lysinibacillus fusiformis ZC1]
 gi|298730074|gb|EFI70616.1| ABC transporter ATP-binding protein [Lysinibacillus fusiformis ZC1]
          Length = 647

 Score = 37.1 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 23/80 (28%), Gaps = 3/80 (3%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           +  +     L   +     L  L  +  DP ++ N      +M E   L +        Q
Sbjct: 85  NEMMTIFESLLAQEQL---LRSLEQQMADPTVYDNPTMYAKVMSEYDQLQHTFKDAGGYQ 141

Query: 64  DRLCDNLILLELALEEDDCS 83
                  +L  +    +D  
Sbjct: 142 YESDIRSVLHGMQFYSEDYD 161


>gi|259418312|ref|ZP_05742230.1| putative peptide chain release factor H [Silicibacter sp.
           TrichCH4B]
 gi|259345707|gb|EEW57551.1| putative peptide chain release factor H [Silicibacter sp.
           TrichCH4B]
          Length = 211

 Score = 37.1 bits (84), Expect = 3.8,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 54/150 (36%), Gaps = 5/150 (3%)

Query: 164 GIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEI 223
           G  SA +++ G  A       +GV      S      +R   F  I+  P     +   +
Sbjct: 50  GPSSAVVILSGTQASALALSVEGVILWRCQSELRPKHKRKNWFVQIFRLPTTTKVVS--V 107

Query: 224 SESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQC---QQERSQHKNKAQAWNML 280
             +   +   RA G GGQH N T SA+R   +     V     +  RSQH+N+  A   L
Sbjct: 108 DPASVEMQAIRAGGPGGQHQNKTSSAIRARWVSPHKQVYSVVVRDSRSQHQNRRLALERL 167

Query: 281 RAKLYELELQKREEIANIGESSKTEIGWGR 310
            A     + +          +   ++  G 
Sbjct: 168 AALASAEQAEAEASRRGETWALHGQLKRGE 197


>gi|303324301|ref|XP_003072138.1| Peptidyl-tRNA hydrolase domain containing protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240111848|gb|EER29993.1| Peptidyl-tRNA hydrolase domain containing protein [Coccidioides
           posadasii C735 delta SOWgp]
          Length = 136

 Score = 37.1 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 28/88 (31%), Positives = 44/88 (50%)

Query: 217 DSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQA 276
                 I ES+      + SG GGQ +N T SAV++ H+PT  VV+ Q  RS+ +N+  A
Sbjct: 1   MPPRPTIDESEITGTYLKGSGPGGQKINKTSSAVQLIHLPTNTVVKSQATRSRSQNRKIA 60

Query: 277 WNMLRAKLYELELQKREEIANIGESSKT 304
             +L  K+  L+       A + E+ + 
Sbjct: 61  LQILAEKVELLQKGDESRAAIVAETKRK 88


>gi|119946803|ref|YP_944483.1| ABC transporter ATP-binding protein [Psychromonas ingrahamii 37]
 gi|119865407|gb|ABM04884.1| ABC transporter ATP-binding protein [Psychromonas ingrahamii 37]
          Length = 638

 Score = 37.1 bits (84), Expect = 3.9,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 33/72 (45%), Gaps = 4/72 (5%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAK--MLMRERQHLDNAISFIKE 61
            +QL+    L   +   Q+L  +  +  DP L+++  +A+   L++++  L  ++   + 
Sbjct: 561 KKQLSSSEKLM--EKLSQQLEEIEKQLADPALYEHAQKARLTELLKQQGELKESLEEAEM 618

Query: 62  IQDRLCDNLILL 73
                 + + L+
Sbjct: 619 AWMDAQEKIELM 630


>gi|328478617|gb|EGF48276.1| ABC transporter ATP-binding protein [Lactobacillus rhamnosus MTCC
          5462]
          Length = 110

 Score = 37.1 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 13/38 (34%)

Query: 16 WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53
               +++  L  K  DP L  +       M++   L 
Sbjct: 45 LQAMARQIHDLEAKLGDPKLIADQAAFAATMKQYDQLQ 82


>gi|330989728|gb|EGH87831.1| SMC domain-containing protein [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 943

 Score = 37.1 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 12/123 (9%), Positives = 35/123 (28%), Gaps = 6/123 (4%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLEL 75
              A +    L  + +   +  +  E   L++E Q L+  +  +  ++ +  +      L
Sbjct: 604 IATAKEAYHQLKERLQQQGV-NDPSEYGRLVQEAQRLETELRKLNTLKSQHSELRTTAML 662

Query: 76  ALEEDDCSILQETSD-----NLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTES 130
            L++   +    +       +    +      +             +  E      G  +
Sbjct: 663 QLDQIQVARRAVSDRRSEFLHATLHENPYVRIELIPYSRDIQGIERSLREALGVPDGKYA 722

Query: 131 QDW 133
            D 
Sbjct: 723 DDL 725


>gi|326797843|ref|YP_004315662.1| ATP-binding cassette protein, ChvD family [Sphingobacterium sp. 21]
 gi|326548607|gb|ADZ76992.1| ATP-binding cassette protein, ChvD family [Sphingobacterium sp. 21]
          Length = 560

 Score = 37.1 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 20/48 (41%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58
            G+ +    +     +N K   P +++N  E + LM  +  L + I  
Sbjct: 94  EGVAETKAILTEYEEINEKFGLPEVYENPDEMEKLMNRQGELQDKIDA 141


>gi|319427548|gb|ADV55622.1| REG family ATPase, YheS [Shewanella putrefaciens 200]
          Length = 636

 Score = 37.1 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 26/74 (35%), Gaps = 5/74 (6%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLMRERQHLDNAISFIK 60
           L R+   L    D     +RL+ L     D  L+   N  +   ++ ER  L   +   +
Sbjct: 559 LKRKQTKLET--DQQKLSERLAELEHLLADSELYDQDNKAKLTAVLTERTSLTQTLEDSE 616

Query: 61  -EIQDRLCDNLILL 73
            +  +   +   + 
Sbjct: 617 MQWLELQEEIDAME 630


>gi|146294204|ref|YP_001184628.1| ABC transporter-like protein [Shewanella putrefaciens CN-32]
 gi|145565894|gb|ABP76829.1| ABC transporter related [Shewanella putrefaciens CN-32]
          Length = 636

 Score = 37.1 bits (84), Expect = 4.0,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 26/74 (35%), Gaps = 5/74 (6%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLMRERQHLDNAISFIK 60
           L R+   L    D     +RL+ L     D  L+   N  +   ++ ER  L   +   +
Sbjct: 559 LKRKQTKLET--DQQKLSERLAELEHLLADSELYDQDNKAKLTAVLTERTSLTQTLEDSE 616

Query: 61  -EIQDRLCDNLILL 73
            +  +   +   + 
Sbjct: 617 MQWLELQEEIDAME 630


>gi|213962115|ref|ZP_03390379.1| ABC transporter domain protein [Capnocytophaga sputigena Capno]
 gi|213955121|gb|EEB66439.1| ABC transporter domain protein [Capnocytophaga sputigena Capno]
          Length = 563

 Score = 37.1 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 5/46 (10%), Positives = 17/46 (36%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             +   + +N        + +  + + LM ++  L + I  +   +
Sbjct: 103 KLLDEFNHINDLFSLEENYSDPDKMQKLMDKQAELQDKIDALNAWE 148


>gi|198456857|ref|XP_001360468.2| GA15649 [Drosophila pseudoobscura pseudoobscura]
 gi|198135777|gb|EAL25043.2| GA15649 [Drosophila pseudoobscura pseudoobscura]
          Length = 181

 Score = 37.1 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 2/86 (2%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
            ++ ES+      R SG GGQ VN T + V + H+PT + ++C   R   KN+ +A  +L
Sbjct: 67  PKLQESEIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITIKCHTHRLASKNRVEARKLL 126

Query: 281 RAKLYELELQKR--EEIANIGESSKT 304
             KL      +        + E  K+
Sbjct: 127 LDKLDAHFNGENSIAAQIKVLEHRKS 152


>gi|183221718|ref|YP_001839714.1| putative translation release factor [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|167780140|gb|ABZ98438.1| Putative translation release factor [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
          Length = 110

 Score = 37.1 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 3/77 (3%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
              + I ESD +    +ASG GGQ+VN   +AV + H+PTG  V+C   RSQ  N+ +A 
Sbjct: 1   MEALGIRESDLKEQFVKASGKGGQNVNKVATAVVLLHLPTGKQVKCSIYRSQGLNRYKAR 60

Query: 278 NMLRAKLYELELQKREE 294
           ++L     ELE ++R E
Sbjct: 61  DLLC---LELEKEQRPE 74


>gi|254519474|ref|ZP_05131530.1| ABC transporter ATP-binding protein [Clostridium sp. 7_2_43FAA]
 gi|226913223|gb|EEH98424.1| ABC transporter ATP-binding protein [Clostridium sp. 7_2_43FAA]
          Length = 639

 Score = 37.1 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKEIQDR 65
           D     ++L  L  +     ++ N  E++ + +E + L+  I+   +E ++ 
Sbjct: 586 DISTGEEKLLSLQEELCLEEIYSNPSESERVNKEIKDLEEKIASLYEEWENL 637


>gi|71020659|ref|XP_760560.1| hypothetical protein UM04413.1 [Ustilago maydis 521]
 gi|46100448|gb|EAK85681.1| hypothetical protein UM04413.1 [Ustilago maydis 521]
          Length = 1371

 Score = 37.1 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/69 (14%), Positives = 25/69 (36%), Gaps = 17/69 (24%)

Query: 2    KLSRQLNCLGGL-FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
            +L ++L     L  D      R+  L+                 L +E+Q L+  +  ++
Sbjct: 1201 ELEKKLQEFEKLTLDKQELEARVGSLD----------------KLTKEKQELEKKVKQLE 1244

Query: 61   EIQDRLCDN 69
            ++  +  + 
Sbjct: 1245 KLSKQNKEL 1253


>gi|159109360|ref|XP_001704945.1| Spindle pole protein, putative [Giardia lamblia ATCC 50803]
 gi|157433021|gb|EDO77271.1| Spindle pole protein, putative [Giardia lamblia ATCC 50803]
          Length = 693

 Score = 37.1 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 61/175 (34%), Gaps = 12/175 (6%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE-IQDRLCDNLILL 73
           D +  V R+  L T+ +D +       A  +++ER  LD  +  +   I     +   L+
Sbjct: 330 DLEQKVARIHALETRIQDMN-----QAATSMIKERADLDTLVQSLNATITSLQEELDSLI 384

Query: 74  ELALEEDDCSILQETSDNLQRIK------LEVEYKQFESLLSGEADSNDAYLEVHAGAGG 127
               ++++  +++ +       K       + +     +    E +         AGA  
Sbjct: 385 AAGKKQEEKHLVEMSDIRGAMQKAVEDVNKQDQENAQLNDRIHELEEALNEARRRAGAAE 444

Query: 128 TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLK 182
           +E+      L+ +  +  E    +    E    +EA I      I   N+   ++
Sbjct: 445 SEANYIKAELMGLSEKLKEYVSNEKGLAEELTKKEAEIARLQKEIHQHNSEKAMR 499


>gi|296215244|ref|XP_002754058.1| PREDICTED: nesprin-2 [Callithrix jacchus]
          Length = 6820

 Score = 37.1 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 45/113 (39%), Gaps = 5/113 (4%)

Query: 16   WDNAVQRLSFLNTKTED--PHLWQNVIEAKMLMRER-QHLDNAISFIKEIQDRLCDN--L 70
                  RL  L  ++ED  P L +++   K L++E  + L +    +KE+Q    D    
Sbjct: 5823 IKELKSRLQVLKAQSEDPLPELHEDLHNEKELIKELEKSLASWTQNLKELQTMKADLTRH 5882

Query: 71   ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            +L+E  +   +              ++ +  ++ E  L+     N+   E+ A
Sbjct: 5883 VLVEDVMVLKEQIEHLHRQWEDLCFRVAIRKQEIEDRLNSWIVFNEKNKELCA 5935


>gi|322514829|ref|ZP_08067848.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Actinobacillus ureae ATCC 25976]
 gi|322119211|gb|EFX91352.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Actinobacillus ureae ATCC 25976]
          Length = 638

 Score = 37.1 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 11/74 (14%), Positives = 28/74 (37%), Gaps = 5/74 (6%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLMRERQHLDNAISFIK 60
           L +++  L    D + A ++L+ L        ++  +N  +    + ++      +  I+
Sbjct: 566 LRKKITQLEK--DLEKASEKLNQLEALLASSEIYEAENKAQLTETLAKQIEAKKVVEEIE 623

Query: 61  -EIQDRLCDNLILL 73
            E  D      +L 
Sbjct: 624 MEWLDCQEQLEVLF 637


>gi|269925711|ref|YP_003322334.1| ABC transporter related protein [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269789371|gb|ACZ41512.1| ABC transporter related protein [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 767

 Score = 37.1 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 2/75 (2%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK 60
           ++L  Q+  L    +  +   RL  L    ED  L+Q+      L+ E   L   +  + 
Sbjct: 564 LRLRAQVQDLET--EISDTEDRLQELQAHLEDDSLYQDREHYYSLLSEYGELQGRLQDLN 621

Query: 61  EIQDRLCDNLILLEL 75
           E  ++    L  LE+
Sbjct: 622 ERWEKKASLLEQLEM 636


>gi|154492953|ref|ZP_02032579.1| hypothetical protein PARMER_02595 [Parabacteroides merdae ATCC
           43184]
 gi|154087258|gb|EDN86303.1| hypothetical protein PARMER_02595 [Parabacteroides merdae ATCC
           43184]
          Length = 562

 Score = 37.1 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 33/100 (33%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +    +N K  DP + ++  +   L+  +  L + I               +  L    +
Sbjct: 105 KEYEEVNEKFGDPEILEDPDKMDALINRQAELQDKIDATDAWNLDSRLERAMDALRCPPE 164

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           D  +   +    +R+ L     Q   +L  +  +N    E
Sbjct: 165 DQVVDTLSGGERRRVALCRLLLQQPDILLLDEPTNHLDAE 204


>gi|298208124|ref|YP_003716303.1| hypothetical protein CA2559_07781 [Croceibacter atlanticus
           HTCC2559]
 gi|83848045|gb|EAP85915.1| conserved hypothetical transmembrane protein [Croceibacter
           atlanticus HTCC2559]
          Length = 624

 Score = 37.1 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 42/113 (37%), Gaps = 13/113 (11%)

Query: 14  FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL--- 70
            D +   +R+  L              E + L +E +HL  +   +K+ + ++ D+    
Sbjct: 437 LDPEMTEERIKALEKL---------HEERQKLSKEEKHLKKSEKRLKKFEAKVEDHEKKR 487

Query: 71  -ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
             LL+   E+   +  +      + I+   +  +       +   ++  +EV+
Sbjct: 488 AELLKEKSEKQREAYEKAMVKRAEAIEKRSKKLEDRKEYITKRYKDNKVVEVY 540


>gi|150015477|ref|YP_001307731.1| ABC transporter [Clostridium beijerinckii NCIMB 8052]
 gi|149901942|gb|ABR32775.1| ABC transporter related [Clostridium beijerinckii NCIMB 8052]
          Length = 639

 Score = 37.1 bits (84), Expect = 4.3,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 20  VQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKEIQDR 65
            + L  L  +     ++ N  E++ + +E ++L   I    ++ ++ 
Sbjct: 591 EEALEKLQEELCKEEVYSNPSESERVNKEIKNLQETIEKLYEQWEEL 637


>gi|206889859|ref|YP_002249325.1| peptide chain release factor [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206741797|gb|ACI20854.1| peptide chain release factor [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 114

 Score = 37.1 bits (84), Expect = 4.3,   Method: Composition-based stats.
 Identities = 27/69 (39%), Positives = 39/69 (56%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
             ++ I ESD      + SG GGQ +N T + V + HIP+ + V+C +ERSQ  N+  A 
Sbjct: 18  MQKLGIKESDIEEKFIKCSGHGGQKLNKTSTGVYLKHIPSAIEVKCTKERSQGLNRFFAR 77

Query: 278 NMLRAKLYE 286
            ML  K+ E
Sbjct: 78  RMLVEKIKE 86


>gi|320102860|ref|YP_004178451.1| Class I peptide chain release factor [Isosphaera pallida ATCC
           43644]
 gi|319750142|gb|ADV61902.1| Class I peptide chain release factor [Isosphaera pallida ATCC
           43644]
          Length = 209

 Score = 37.1 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 2/71 (2%)

Query: 217 DSIEIEISESDCRIDTYRA--SGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKA 274
              + + +    + DT R   SG GGQ+ N  ++A+ + H PTG+ V+  + R Q +N  
Sbjct: 30  HPAQWDAASLQRQCDTTRTRRSGPGGQNRNKVETAIVLVHRPTGIKVEANERRRQGENLQ 89

Query: 275 QAWNMLRAKLY 285
            A   LR  L 
Sbjct: 90  VALFRLRIALA 100


>gi|258570383|ref|XP_002543995.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237904265|gb|EEP78666.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 162

 Score = 37.1 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 13/101 (12%)

Query: 216 DDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQ 275
                  I ES+      + SG GGQ +N T SAV++ H+PT  VV+ Q  RS+ +N+  
Sbjct: 35  QMPARPTIDESEITGSYLKGSGPGGQKINKTSSAVQLIHLPTNTVVKSQATRSRSQNRKI 94

Query: 276 AWNMLRAKLYELE-------------LQKREEIANIGESSK 303
           A  +L  K+  L+              QKR+         K
Sbjct: 95  ALQILAEKVELLQKGGQSRAAIVAQTKQKRKASKTKKSKRK 135


>gi|332880579|ref|ZP_08448253.1| ATP-dependent chaperone protein ClpB [Capnocytophaga sp. oral taxon
           329 str. F0087]
 gi|332681567|gb|EGJ54490.1| ATP-dependent chaperone protein ClpB [Capnocytophaga sp. oral taxon
           329 str. F0087]
          Length = 866

 Score = 37.1 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 17/47 (36%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           + D   +RL  L  + E      +  + + L +E   L    S  K 
Sbjct: 409 ELDEIERRLKQLEIEREAIKRENDQPKLEQLSKEIAELKEQESSYKA 455


>gi|330997711|ref|ZP_08321556.1| ATP-dependent chaperone protein ClpB [Paraprevotella xylaniphila
           YIT 11841]
 gi|329570239|gb|EGG51979.1| ATP-dependent chaperone protein ClpB [Paraprevotella xylaniphila
           YIT 11841]
          Length = 866

 Score = 37.1 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 17/47 (36%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           + D   +RL  L  + E      +  + + L +E   L    S  K 
Sbjct: 409 ELDEIERRLKQLEIEREAIKRENDQPKLEQLSKEIAELKEQESSYKA 455


>gi|269854050|gb|ACZ51239.1| merozoite surface protein 1 [Plasmodium ovale]
          Length = 1718

 Score = 37.1 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/80 (13%), Positives = 32/80 (40%), Gaps = 2/80 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAK-MLMRERQHLDNAISFIK- 60
           L +++  L    +    ++ ++   +K   P    +  + +  + + +  + N    +K 
Sbjct: 298 LKKRVQTLKEHKEIKKLLEEIAEKESKVTQPSNTDSQAQLQEEINKLKTQIKNIAKTVKF 357

Query: 61  EIQDRLCDNLILLELALEED 80
           E++    D + L     E+D
Sbjct: 358 EMEGLFTDPVELDYYLREKD 377


>gi|311747695|ref|ZP_07721480.1| ABC transporter, ATP-binding protein [Algoriphagus sp. PR1]
 gi|126575683|gb|EAZ79993.1| ABC transporter, ATP-binding protein [Algoriphagus sp. PR1]
          Length = 640

 Score = 37.1 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 2/74 (2%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL   L+ +      +   Q  S L TK  DP L+ +  EAK    + Q L   ++ + +
Sbjct: 566 KLEESLSKVEAS--IEKLEQSKSQLETKMADPSLYSDDEEAKKAQLKHQELHKQLNEMND 623

Query: 62  IQDRLCDNLILLEL 75
             + L D + +++ 
Sbjct: 624 KWEALVDQISMIQE 637


>gi|297183730|gb|ADI19854.1| protein chain release factor a [uncultured alpha proteobacterium
           EB000_46D07]
          Length = 90

 Score = 37.1 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 23/61 (37%), Positives = 33/61 (54%)

Query: 103 QFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEE 162
           Q   L   + DS +A LEV AG GG E+  +A+ L  MY R+A K  +K E +E+ +   
Sbjct: 28  QLLLLPKDKDDSRNAILEVRAGTGGDEAALFASNLFSMYQRFAAKHGWKFEVMEVSETGI 87

Query: 163 A 163
            
Sbjct: 88  G 88


>gi|239825795|ref|YP_002948419.1| ABC transporter [Geobacillus sp. WCH70]
 gi|239806088|gb|ACS23153.1| ABC transporter related [Geobacillus sp. WCH70]
          Length = 644

 Score = 37.1 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 6/39 (15%), Positives = 15/39 (38%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN 54
                ++L  +  +  DP L  +    + L+++   L  
Sbjct: 94  LKTIEKQLRQMELQMGDPDLIADSSRYEKLLKDYDALQE 132



 Score = 36.7 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 7/50 (14%), Positives = 25/50 (50%), Gaps = 4/50 (8%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRE----RQHLDNAISFIKEIQDRL 66
           Q++++++ +  DP ++Q+  + + L +E    +  L+  +   + +    
Sbjct: 595 QQIAYIDEQLCDPEIYQDHEKVQKLTKESDEMKGKLEKLLEEWETLHTLQ 644


>gi|312868542|ref|ZP_07728740.1| ABC transporter, ATP-binding protein [Lactobacillus oris
           PB013-T2-3]
 gi|311095935|gb|EFQ54181.1| ABC transporter, ATP-binding protein [Lactobacillus oris
           PB013-T2-3]
          Length = 644

 Score = 37.1 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 8/70 (11%), Positives = 24/70 (34%), Gaps = 3/70 (4%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK- 60
           KL R+++ L           + + +  +   P +  ++ +   L +E   L      ++ 
Sbjct: 571 KLQRKVDDLEKQM--AQLEDQQANIEAEMSKPEVATDIGKLTDLQKELDQLKAQSEEVEL 628

Query: 61  EIQDRLCDNL 70
           +      +  
Sbjct: 629 DWTAAAEELE 638


>gi|242003858|ref|XP_002422888.1| conserved hypothetical protein [Pediculus humanus corporis]
 gi|212505770|gb|EEB10150.1| conserved hypothetical protein [Pediculus humanus corporis]
          Length = 851

 Score = 37.1 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 25/79 (31%), Gaps = 8/79 (10%)

Query: 5   RQLNCLGGLFDW-----DNAVQRLSFLNTKTEDPH-LWQNVIEAKMLMRE--RQHLDNAI 56
            ++  L G+ D      + +  R++ L         L  +   A   ++E  ++ L+   
Sbjct: 688 EEVRNLNGMVDLKVSALEASKNRVNELEALLAKKDALIADQKRALKTVKEECQEQLEAVE 747

Query: 57  SFIKEIQDRLCDNLILLEL 75
           +  K            +  
Sbjct: 748 TKYKSQIAINRKLEECIFE 766


>gi|213402735|ref|XP_002172140.1| conserved hypothetical protein [Schizosaccharomyces japonicus yFS275]
 gi|212000187|gb|EEB05847.1| conserved hypothetical protein [Schizosaccharomyces japonicus yFS275]
          Length = 1331

 Score = 37.1 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 66/203 (32%), Gaps = 10/203 (4%)

Query: 8    NCLGGLFDWDNAVQRLSFLNTKTEDPHL-WQNVIEAK----MLMRERQHLDNAISFIKEI 62
            + LG + D ++  Q ++ L  KTE+  +    + E K       +    L + +    E+
Sbjct: 1099 DELGDM-DKNSLKQEIAELKQKTENVEVDVNVLEEYKSRQVEASKRENELKDEVLRRDEL 1157

Query: 63   QDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVH 122
            + ++ D   L  L       + + +    + +I       + E + S +  S      V 
Sbjct: 1158 KKKIDDLNAL-RLDEFMAGFNAISKKLKEMYQIITMGGNAELELVDSLDPFSEGVVFSVM 1216

Query: 123  AGAGG---TESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYG 179
                      +       L           +K   + + D  +A +    + I       
Sbjct: 1217 PPKKSWKNISNLSGGEKTLSSLALVFALHNYKPTPIYVMDEIDAALDFKNVSIVANYIKE 1276

Query: 180  WLKGEQGVHRLVRISPYDSNSRR 202
              K  Q +   +R + ++  SR 
Sbjct: 1277 RTKNAQFIVISLRSNMFELASRL 1299


>gi|288927538|ref|ZP_06421385.1| DNA gyrase, A subunit [Prevotella sp. oral taxon 317 str. F0108]
 gi|288330372|gb|EFC68956.1| DNA gyrase, A subunit [Prevotella sp. oral taxon 317 str. F0108]
          Length = 871

 Score = 37.1 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 15/157 (9%), Positives = 37/157 (23%), Gaps = 9/157 (5%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFIKEIQD 64
           +L+ L G    +        L         +  +  E K +M+    L+       + + 
Sbjct: 430 RLSQLTG-LRIEQLHAEYQELEELIARLQLILDDPEECKRVMK--AELEEVKEKFGD-ER 485

Query: 65  RLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
           R        E   E+   +     + +           +F     G   S       +  
Sbjct: 486 RTEIIPDEHEFNAEDFYPNDPVVITVSHLGYIKRTPLSEFHEQARGGVGSKG----ANTR 541

Query: 125 AGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGE 161
                   +   + +    + +K +            
Sbjct: 542 DKDFTEYIYPATMHQTMLFFTKKGRCHWLKCYEIPEG 578


>gi|323698136|ref|ZP_08110048.1| ABC transporter related protein [Desulfovibrio sp. ND132]
 gi|323458068|gb|EGB13933.1| ABC transporter related protein [Desulfovibrio desulfuricans ND132]
          Length = 657

 Score = 37.1 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 24/71 (33%), Gaps = 2/71 (2%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEI 62
           L ++ + L    D +  +   + L  K  DP  ++   EA  L    +        + E 
Sbjct: 582 LKKKYDKLEA--DLEKVLDEQAGLEAKMNDPATYEKPEEALRLNAAYKDATEWAETLMER 639

Query: 63  QDRLCDNLILL 73
              L   +  +
Sbjct: 640 MAELEGRMEAI 650


>gi|255280969|ref|ZP_05345524.1| ABC transporter, ATP-binding protein [Bryantella formatexigens DSM
           14469]
 gi|255268417|gb|EET61622.1| ABC transporter, ATP-binding protein [Bryantella formatexigens DSM
           14469]
          Length = 647

 Score = 37.1 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 8/51 (15%), Positives = 19/51 (37%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRL 66
                QR   L+     P ++ +      L +E+  +   +  + E+ + L
Sbjct: 596 IQALEQRDGELDELLAQPEVYSDAARCIELNKEKYEISQKLEELYELWETL 646


>gi|325268693|ref|ZP_08135322.1| mobilization protein [Prevotella multiformis DSM 16608]
 gi|324988937|gb|EGC20891.1| mobilization protein [Prevotella multiformis DSM 16608]
          Length = 418

 Score = 36.7 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 15/111 (13%), Positives = 35/111 (31%), Gaps = 5/111 (4%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI---- 56
           +++   L  L G  + D A +R+  L  + E         +A  + +E   L + +    
Sbjct: 242 LQVKGTLYSLFGNTELDKAEKRIEELEREMERQKFLSEKEKA-EIRKEVILLQDTVRGRD 300

Query: 57  SFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESL 107
             I E+++ +              +          + R     + +  E  
Sbjct: 301 RTIAELKETMQVYEEERNWIKRFFNGFYQLLNIRLMLRKMNFSDDRIAEMY 351


>gi|166031781|ref|ZP_02234610.1| hypothetical protein DORFOR_01482 [Dorea formicigenerans ATCC
           27755]
 gi|166028234|gb|EDR46991.1| hypothetical protein DORFOR_01482 [Dorea formicigenerans ATCC
           27755]
          Length = 641

 Score = 36.7 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 6/50 (12%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF-IKEIQDRLC 67
              R + ++T      ++ N ++ + L +E   +D  +    ++ ++   
Sbjct: 592 LEDRSAEIDTLMSQEEVYTNSVKCQELAKEHAEIDAELETLYEKWEELAE 641


>gi|189462626|ref|ZP_03011411.1| hypothetical protein BACCOP_03318 [Bacteroides coprocola DSM 17136]
 gi|189430787|gb|EDU99771.1| hypothetical protein BACCOP_03318 [Bacteroides coprocola DSM 17136]
          Length = 646

 Score = 36.7 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 4/55 (7%), Positives = 20/55 (36%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNL 70
            +   + ++ L  +   P    ++   +   + ++ + +A    + +   L +  
Sbjct: 591 IERLEKEVAELEERMATPEGASDMKLYEQHQQLKKQISDAEEEWENVSLELEELK 645


>gi|302688227|ref|XP_003033793.1| hypothetical protein SCHCODRAFT_81664 [Schizophyllum commune H4-8]
 gi|300107488|gb|EFI98890.1| hypothetical protein SCHCODRAFT_81664 [Schizophyllum commune H4-8]
          Length = 1017

 Score = 36.7 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 38/315 (12%), Positives = 86/315 (27%), Gaps = 17/315 (5%)

Query: 12  GLFDWDNA--VQRLSFLNTKTEDPHLWQNV--------------IEAKMLMRERQHLDNA 55
            + +W++     RL       +    WQ                   K ++ E++ L++ 
Sbjct: 409 RMLEWESKMERDRLQQREEMLQREEEWQRRRKGKQREMDEEDMTQRYKEVVEEKKALESL 468

Query: 56  ISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSN 115
           I+ ++    RL D L   +  L +       + +   +R +   + ++    L GE +  
Sbjct: 469 ITSLRTHLTRLTDELEQHKEMLAQIRIDNQTKENKWEERWQEVDKLREEVERLGGEVEVL 528

Query: 116 DAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE-IHDGEEAGIKSATLLIKG 174
              +E         S   +       +   + +             E    +  +     
Sbjct: 529 RGVVEEGLKDRSRHSNGSSRDESVQVSFTQDAQDLSRSQRRPSARPERQRQRQPSGNASQ 588

Query: 175 PNAYGWLKGEQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYR 234
            +    L         V       +                      +  E + ++    
Sbjct: 589 QSRGDDLSMLPQQSIEVSNPDMGMSVDEDDEEEEEDETAPSQRPTVEDSDEEEDQLPFDP 648

Query: 235 ASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREE 294
            S  G        +A R              +RS   N++      R  L   E+++ E+
Sbjct: 649 VSIPGSSRAQIGTNADRTIRTDRATKSAESSDRSMRANQSGVGETSRPFLDSDEIRQIEQ 708

Query: 295 IANIGESSKTEIGWG 309
                 SS+++   G
Sbjct: 709 EMEERRSSRSQTSVG 723


>gi|203460691|ref|YP_002224425.1| gp204 [Mycobacterium phage Spud]
 gi|197312272|gb|ACH62628.1| gp204 [Mycobacterium phage Spud]
          Length = 113

 Score = 36.7 bits (83), Expect = 5.0,   Method: Composition-based stats.
 Identities = 27/56 (48%), Positives = 37/56 (66%)

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           DC ++T R  G GGQ+ NT D+AVRI H P+G V + Q+ERSQ +NK  A+  +  
Sbjct: 8   DCVVETKRGHGNGGQNRNTRDTAVRIVHPPSGAVGESQEERSQLQNKKTAFRRMAE 63


>gi|204305830|ref|YP_002224647.1| gp203 [Mycobacterium phage Cali]
 gi|197312803|gb|ACH63156.1| gp203 [Mycobacterium phage Cali]
          Length = 110

 Score = 36.7 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 27/60 (45%), Positives = 40/60 (66%)

Query: 223 ISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           ++ +DC ++T R  G GGQ+ NT D+AVRI H P+G V + Q+ERSQ +NK  A+  +  
Sbjct: 1   MTLADCVVETKRGHGNGGQNRNTRDTAVRIVHPPSGAVGESQEERSQLQNKKTAFRRMAE 60


>gi|29566685|ref|NP_818251.1| gp200 [Mycobacterium phage Bxz1]
 gi|109393384|ref|YP_656182.1| gp202 [Mycobacterium phage Catera]
 gi|29425410|gb|AAN16834.1| gp200 [Mycobacterium phage Bxz1]
 gi|91981206|gb|ABE67921.1| gp202 [Mycobacterium phage Catera]
          Length = 113

 Score = 36.7 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 27/56 (48%), Positives = 37/56 (66%)

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           DC ++T R  G GGQ+ NT D+AVRI H P+G V + Q+ERSQ +NK  A+  +  
Sbjct: 8   DCVVETKRGHGNGGQNRNTRDTAVRIVHPPSGAVGESQEERSQLQNKKTAFRRMAE 63


>gi|328768224|gb|EGF78271.1| hypothetical protein BATDEDRAFT_90766 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 177

 Score = 36.7 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 40/85 (47%)

Query: 193 ISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
           I P  S +      +   V   V   + +++ E+D      + SG GGQ +N    +V++
Sbjct: 36  IPPQTSAATLSIQPTQSQVPKEVKKRLPVQLVETDLVEKFTKGSGPGGQKINKCKHSVQL 95

Query: 253 THIPTGVVVQCQQERSQHKNKAQAW 277
            H PTG+ V+ Q+ R    N+ +A 
Sbjct: 96  WHTPTGLFVETQRFRELASNRREAR 120


>gi|242371717|ref|ZP_04817291.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Staphylococcus epidermidis M23864:W1]
 gi|242350577|gb|EES42178.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Staphylococcus epidermidis M23864:W1]
          Length = 643

 Score = 36.7 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 26/55 (47%), Gaps = 4/55 (7%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQH----LDNAISFIKEIQDRL 66
            +     +S++  +   P ++ + I+A  L  E+      L+  +   +E+Q++L
Sbjct: 589 IEAFETHISYIEEQLTQPEVFNDPIKAAELAEEKNETEQKLEQVMFEWEELQEKL 643


>gi|150865855|ref|XP_001385239.2| hypothetical protein PICST_60261 [Scheffersomyces stipitis CBS
           6054]
 gi|149387111|gb|ABN67210.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 156

 Score = 36.7 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 25/55 (45%), Positives = 36/55 (65%)

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYEL 287
               G GGQ +N ++S V++TH+PTG+VV CQ  RSQ  N+ +A  +L  KL +L
Sbjct: 28  KGGRGPGGQKINKSNSKVQLTHLPTGIVVTCQYSRSQESNRKRAREILALKLDDL 82


>gi|295098982|emb|CBK88071.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component
           [Eubacterium cylindroides T2-87]
          Length = 328

 Score = 36.7 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 34/101 (33%), Gaps = 8/101 (7%)

Query: 18  NAVQRLSFLNTK-----TEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           +    +  L          +P    +  EA  ++ +    ++ +   K+ +    D L  
Sbjct: 117 SLESYVEELEALDIPVVLLEPETADDFEEAVEIIGKVMGCEDKVDEYKQYE---EDLLEK 173

Query: 73  LELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEAD 113
            EL   E++ ++    SD L     ++   +  S    +  
Sbjct: 174 YELDEVEEEPTVYFAGSDLLTCATDDMYQGEILSYAQADNA 214


>gi|269792020|ref|YP_003316924.1| ABC transporter-like protein [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269099655|gb|ACZ18642.1| ABC transporter related protein [Thermanaerovibrio acidaminovorans
           DSM 6589]
          Length = 658

 Score = 36.7 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 4/58 (6%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRER----QHLDNAISFIKEIQDRLCDN 69
            + A  R S + +   DP +  +    + LM E       L+   +  +E+   L   
Sbjct: 600 IEEAEGRKSQVESMLCDPEVLSDSALVQELMVELSGLSSSLEGLYARWEELAAELDSI 657


>gi|222151965|ref|YP_002561125.1| ABC transporter ATP-binding protein [Macrococcus caseolyticus
           JCSC5402]
 gi|222121094|dbj|BAH18429.1| ABC transporter ATP-binding protein [Macrococcus caseolyticus
           JCSC5402]
          Length = 639

 Score = 36.7 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 30/70 (42%), Gaps = 6/70 (8%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEA----KMLMRERQHLDNAIS 57
           KL RQ   L    + +   +R++ +  +   P ++ ++ +A    + L+R     +  + 
Sbjct: 571 KLERQKEKLETQIEIN--EERINEIELELTKPEVFSDIEKANTFNEELIRLNNENEKLLE 628

Query: 58  FIKEIQDRLC 67
              +I+  L 
Sbjct: 629 EWSDIEMALE 638


>gi|320353117|ref|YP_004194456.1| ABC transporter-like protein [Desulfobulbus propionicus DSM 2032]
 gi|320121619|gb|ADW17165.1| ABC transporter related protein [Desulfobulbus propionicus DSM
           2032]
          Length = 611

 Score = 36.7 bits (83), Expect = 5.2,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 17/54 (31%), Gaps = 4/54 (7%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL----DNAISFIKEIQDRLC 67
            A  RL  L      P +  N  +      E+Q L    +       E++ R  
Sbjct: 557 AAEARLGELEALMASPEVMANPAQLHRYWEEQQELQTKTEQLYDRWDELEQRRQ 610


>gi|242021327|ref|XP_002431096.1| Phosphatidylinositol 3-kinase regulatory subunit alpha, putative
           [Pediculus humanus corporis]
 gi|212516345|gb|EEB18358.1| Phosphatidylinositol 3-kinase regulatory subunit alpha, putative
           [Pediculus humanus corporis]
          Length = 726

 Score = 36.7 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 41/122 (33%), Gaps = 9/122 (7%)

Query: 8   NCLGGLFDWDNAVQRLSFLNTKTEDPH--LWQNVIEAKMLMRERQHLD--NAISFIKEIQ 63
           + +    + +   ++L+ +  + +D      +   +   + +E   +     +    E+ 
Sbjct: 424 DEIASSLNIEKVAKKLAEIEAQLQDKSRTFQKLKEDFNKISKEI-EVKRGPTMDAFIELT 482

Query: 64  DRLCDNLILLELAL----EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
           +   +   L E         +  S++  +    QRIK   E ++       +  +    L
Sbjct: 483 NMFKEQQELQERFKKEAQPHEIKSLMVNSELLKQRIKSLEESRELLKENLKQQVAYYKTL 542

Query: 120 EV 121
           E 
Sbjct: 543 ER 544


>gi|301756711|ref|XP_002914207.1| PREDICTED: LOW QUALITY PROTEIN: nesprin-2-like [Ailuropoda
            melanoleuca]
          Length = 6901

 Score = 36.7 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 5/113 (4%)

Query: 16   WDNAVQRLSFLNTKTEDP--HLWQNVIEAKMLMRER-QHLDNAISFIKEIQDRLCDN--L 70
                  RL  L  ++ DP   L +++ + K LM+E  + L N    +KE+     D    
Sbjct: 5811 IKELKSRLQVLKAQSRDPLPELHEDLHKEKELMKELEKSLGNWTKNLKELHTMKTDLTQH 5870

Query: 71   ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            IL+E  +  ++ +           +++ V  ++ E  L+     N+   E+ A
Sbjct: 5871 ILVEDVMVLEEQTEHLHRQWEDLCLRVAVRKQEIEDRLNSWIVFNEKNKELCA 5923


>gi|281416112|ref|YP_003347848.1| gp198 [Mycobacterium phage ET08]
 gi|255927791|gb|ACU41412.1| gp198 [Mycobacterium phage ET08]
 gi|255928079|gb|ACU41698.1| gp203 [Mycobacterium phage LRRHood]
          Length = 136

 Score = 36.7 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 27/56 (48%), Positives = 37/56 (66%)

Query: 227 DCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRA 282
           DC ++T R  G GGQ+ NT D+AVRI H P+G V + Q+ERSQ +NK  A+  +  
Sbjct: 31  DCVVETKRGHGNGGQNRNTRDTAVRIVHPPSGAVGESQEERSQLQNKKTAFRRMAE 86


>gi|117619670|ref|YP_858042.1| ABC transporter, ATP-binding protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117561077|gb|ABK38025.1| ABC transporter, ATP-binding protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 636

 Score = 36.7 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 9/78 (11%), Positives = 30/78 (38%), Gaps = 5/78 (6%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQN--VIEAKMLMRERQHLDNAISFIK 60
           L ++L  L      +    +L+ +  +  DP +++     +   L++ +  +   +  ++
Sbjct: 560 LRQKLEKLETSM--EKLQAKLAAVEEQLADPAIYEESAKQKLSELLKSQGPIKEELEGVE 617

Query: 61  -EIQDRLCDNLILLELAL 77
            E      +   + +  L
Sbjct: 618 LEWMSLSEELETMEQAFL 635


>gi|73969651|ref|XP_538496.2| PREDICTED: similar to Hook-related protein 1 isoform 1 [Canis
           familiaris]
          Length = 2030

 Score = 36.7 bits (83), Expect = 5.4,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 50/165 (30%), Gaps = 11/165 (6%)

Query: 2   KLSRQLNCLGG----LFDWDNAVQRL----SFLNTKT--EDPHLWQNVIEAKMLMRERQH 51
           +L   ++   G    +   +   QRL      L  +   E   L      +K LM+E+  
Sbjct: 478 ELRSTMDSAEGNASKILKIEKENQRLSKKVEILENEIIQEKQSLQNCQNLSKDLMKEKAQ 537

Query: 52  LDNAISFIKE-IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
           L+  I  ++E  + ++       E   +       +       R+K   +  +       
Sbjct: 538 LEKTIETLRENSERQIKILEQENEHLNQTVTSLRQRSQISAEARVKDIEKENKILHESIK 597

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           E  S  + +E        E + +     R      E    + E  
Sbjct: 598 ETSSKLSKIEFEKRQIRKELEHYKEKGERAEELENELHHLEKENE 642


>gi|66395599|ref|YP_239938.1| ORF011 [Staphylococcus phage 3A]
 gi|62635945|gb|AAX91056.1| ORF011 [Staphylococcus phage 3A]
          Length = 387

 Score = 36.7 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 44/129 (34%), Gaps = 10/129 (7%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G          +   L+ K  DP++  ++ + K L  E+  L         
Sbjct: 6   ELKQSLGMIG-----QQLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 55

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ ++ D     +  +++   +                 Y+        E  S +A   +
Sbjct: 56  VERQVKDIEEKEKAKVKDTGEAYQSLNDHEKMVKAKAEFYRHAILPNEFEKPSMEAQRLL 115

Query: 122 HAGAGGTES 130
           HA   G +S
Sbjct: 116 HALPTGNDS 124


>gi|326929619|ref|XP_003210956.1| PREDICTED: probable peptide chain release factor C12orf65,
           mitochondrial-like [Meleagris gallopavo]
          Length = 165

 Score = 36.7 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 39/63 (61%)

Query: 222 EISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLR 281
           +++E++ +    R  G GGQ  N T + V + H+P+G+VV+C Q RS  KN+  A  +L+
Sbjct: 55  QLTEAELKEQFVRGDGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVEKNRKIAREILQ 114

Query: 282 AKL 284
            K+
Sbjct: 115 EKV 117


>gi|254690017|ref|ZP_05153271.1| peptide chain release factor 1 [Brucella abortus bv. 6 str. 870]
          Length = 35

 Score = 36.7 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 6/24 (25%), Positives = 13/24 (54%)

Query: 332 KTSPSDVLDGDLDDFMKATLAIKK 355
                 V++GDLD+ + A ++  +
Sbjct: 1   LYKLDRVMEGDLDELVDALISDHQ 24


>gi|15613113|ref|NP_241416.1| ABC transporter ATP-binding protein [Bacillus halodurans C-125]
 gi|10173163|dbj|BAB04269.1| ABC transporter (ATP-binding protein) [Bacillus halodurans C-125]
          Length = 642

 Score = 36.7 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 19/47 (40%), Gaps = 1/47 (2%)

Query: 8   NCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53
           + +  +F+      +RL  +  +  +P L  N    + L+ E   L 
Sbjct: 85  DEMLSVFEPLQQMERRLRKMEEQMANPALLNNASSYEKLLEEYDSLQ 131


>gi|295100719|emb|CBK98264.1| ATPase components of ABC transporters with duplicated ATPase
           domains [Faecalibacterium prausnitzii L2-6]
          Length = 631

 Score = 36.7 bits (83), Expect = 5.6,   Method: Composition-based stats.
 Identities = 6/70 (8%), Positives = 20/70 (28%), Gaps = 3/70 (4%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD-NAISFIK 60
           +L  ++       + +    R   L  +   P ++ +    +    E   L  +      
Sbjct: 554 ELRAKIKACED--EMEACGAREVELENEINSPEVYNDPQLLREKSDELSDLRFHQDELFA 611

Query: 61  EIQDRLCDNL 70
             +  + +  
Sbjct: 612 AWEAAVEEQE 621


>gi|309380006|emb|CBX21417.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 636

 Score = 36.7 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 5/57 (8%), Positives = 22/57 (38%), Gaps = 4/57 (7%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLC 67
           +        + +N +  DP ++++  +A  L    + ++      +   + ++ +  
Sbjct: 576 EIAALEAEQAEINAQLSDPEIFKDYEKAGALQNRAEEIETLLLEKLERWERLEAKQN 632


>gi|189184299|ref|YP_001938084.1| ABC transporter ATP-binding protein Uup [Orientia tsutsugamushi
           str. Ikeda]
 gi|189181070|dbj|BAG40850.1| ABC transporter ATP-binding protein Uup [Orientia tsutsugamushi
           str. Ikeda]
          Length = 601

 Score = 36.7 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 31/75 (41%), Gaps = 11/75 (14%)

Query: 2   KLSRQLN-CLGGLFD-----WDNAVQRLSFLNTKTEDPHLW-QNVIEAKMLMRERQ---- 50
           KLS +L+     + D           ++  L  K  DP+L+  N  E  +  +E +    
Sbjct: 525 KLSTKLSYKFQRMLDSIPEEITQLETQVKDLEKKLADPNLYQNNPDEFLLFSKELETSKL 584

Query: 51  HLDNAISFIKEIQDR 65
            ++      ++I++R
Sbjct: 585 RIEELFDTWQKIENR 599


>gi|259502711|ref|ZP_05745613.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus antri DSM 16041]
 gi|259169356|gb|EEW53851.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus antri DSM 16041]
          Length = 645

 Score = 36.7 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 9/70 (12%), Positives = 23/70 (32%), Gaps = 3/70 (4%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK- 60
           KL R+++ L          ++ S +  +   P +  ++     L +E   L      ++ 
Sbjct: 572 KLQRKVDDLED--QLAQLEEQQSTIEAEMSKPEVATDIGRLTDLQKELDQLKAQSDEVEL 629

Query: 61  EIQDRLCDNL 70
                  +  
Sbjct: 630 AWTAAAEELE 639


>gi|303243902|ref|ZP_07330242.1| conserved hypothetical protein [Methanothermococcus okinawensis
           IH1]
 gi|302485838|gb|EFL48762.1| conserved hypothetical protein [Methanothermococcus okinawensis
           IH1]
          Length = 367

 Score = 36.7 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 8/149 (5%), Positives = 39/149 (26%), Gaps = 28/149 (18%)

Query: 5   RQLNCLGGLFDWDNAVQRLSFLNTKT-EDPHLWQNVIEA--------------------K 43
            ++   G + + +   + +  L  +      +  ++ +                     K
Sbjct: 118 SRIEFAGSIKELEKLFKEVRELEAEIKAKEKVVDDLEKVIFYYKALKKITKKRIKKAYRK 177

Query: 44  MLMRE---RQHLDNAISFI----KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIK 96
            + +E    +  +  +       +  +    +   L     E  +          +  + 
Sbjct: 178 AIGKEKTNYKEYNKIVDEYMSARERYEQLKDEINELKNYKNELLESLSFTGEDGGIVWLV 237

Query: 97  LEVEYKQFESLLSGEADSNDAYLEVHAGA 125
             ++++  +   S     ++     +A  
Sbjct: 238 DRIDWENKKIFFSDVHMFSEIEFLTNANV 266


>gi|24214865|ref|NP_712346.1| peptidyl-tRNA hydrolase [Leptospira interrogans serovar Lai str.
           56601]
 gi|24195884|gb|AAN49364.1| peptidyl-tRNA hydrolase involved in peptide chain release
           [Leptospira interrogans serovar Lai str. 56601]
          Length = 155

 Score = 36.7 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 4/92 (4%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
              ++I E++      R+ G GGQ+VN   +AV + H PTG+ V+C   R+Q  N+ +A 
Sbjct: 19  MEILQIKETELEESFTRSGGKGGQNVNKVSTAVHLRHKPTGIEVKCSLYRTQGLNRYKAR 78

Query: 278 NMLRAKLYELELQKR----EEIANIGESSKTE 305
            +L  K+ +   +      E+   +  + + +
Sbjct: 79  AILCEKIRDFNHKNLGIISEDQKKLIRNKQKD 110


>gi|315656349|ref|ZP_07909238.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Mobiluncus curtisii subsp. holmesii ATCC 35242]
 gi|315492908|gb|EFU82510.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Mobiluncus curtisii subsp. holmesii ATCC 35242]
          Length = 560

 Score = 36.7 bits (83), Expect = 5.9,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 50/189 (26%), Gaps = 14/189 (7%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           +    + R + ++ +  DP       +   LM E   L  AI               +  
Sbjct: 95  EIKAKLDRYNEISAQMADPD-----ADFDALMEEMGQLQEAIDAADAWDLDSQLEQAMDA 149

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           L     D  +   +    +R+ L     +   LL  +  +N             ES  W 
Sbjct: 150 LRCPPADADVKTLSGGERRRVALCKLLLEAPDLLLLDEPTNHL---------DAESVLWL 200

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
              L  Y             L+   G  A +    L     N   +L+ +Q    +    
Sbjct: 201 EQHLSQYKGAVIAVTHDRYFLDHVAGWIAEVDRGHLYPYEGNYSTYLEKKQERLEVQGRK 260

Query: 195 PYDSNSRRH 203
                 R  
Sbjct: 261 DAKLQKRLK 269


>gi|170725043|ref|YP_001759069.1| ABC transporter-like protein [Shewanella woodyi ATCC 51908]
 gi|169810390|gb|ACA84974.1| ABC transporter related [Shewanella woodyi ATCC 51908]
          Length = 657

 Score = 36.7 bits (83), Expect = 5.9,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 32/80 (40%), Gaps = 8/80 (10%)

Query: 2   KLSRQLNCLGGL-----FDWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLMRERQHLDN 54
           +L ++L+ +  +      D + A  RL+ +     D  L+  +N  +   ++ ER  L  
Sbjct: 571 ELRQKLSPMRKIQLKLEKDQEKANSRLAEIEEMLGDMALYEAENKDKLTQVLNERTKLTQ 630

Query: 55  AISFIK-EIQDRLCDNLILL 73
           A+   + E  D       + 
Sbjct: 631 AVEESEMEWLDVQESIEEIE 650


>gi|291458641|ref|ZP_06598031.1| putative ABC transporter, ATP-binding protein [Oribacterium sp.
           oral taxon 078 str. F0262]
 gi|291419174|gb|EFE92893.1| putative ABC transporter, ATP-binding protein [Oribacterium sp.
           oral taxon 078 str. F0262]
          Length = 579

 Score = 36.7 bits (83), Expect = 5.9,   Method: Composition-based stats.
 Identities = 7/59 (11%), Positives = 21/59 (35%), Gaps = 1/59 (1%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI-SFIKEIQDRLCDNLIL 72
           +     +R   L  +   P +  ++     L RE++  +  +    ++ +    +   L
Sbjct: 520 EIQKLEERSGELTEQMALPEIASDIGRLMELHREKEAAEERLSELYEDWERFSEELERL 578


>gi|288802170|ref|ZP_06407610.1| DNA gyrase, A subunit [Prevotella melaninogenica D18]
 gi|288335137|gb|EFC73572.1| DNA gyrase, A subunit [Prevotella melaninogenica D18]
          Length = 847

 Score = 36.7 bits (83), Expect = 5.9,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 18/55 (32%), Gaps = 4/55 (7%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFI 59
           +L+ L G    D   Q    L    +D   +  N    K +M+E   L       
Sbjct: 418 RLSQLTG-LRLDQLHQEFEELMQTIKDLQEILNNPERCKEVMKE--ELQEVKEKY 469


>gi|323439019|gb|EGA96752.1| phiSLT ORF387-like protein, putative phage capsid protein
           [Staphylococcus aureus O11]
          Length = 402

 Score = 36.7 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 44/129 (34%), Gaps = 10/129 (7%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G          +   L+ K  DP++  ++ + K L  E+  L         
Sbjct: 21  ELKQSLGMIG-----QQLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ ++ D     +  +++   +                 Y+        E  S +A   +
Sbjct: 71  VERQVKDIEEKEKAKVKDTGEAYQSLNDHEKMVKAKAEFYRHAILPNEFEKPSMEAQRLL 130

Query: 122 HAGAGGTES 130
           HA   G +S
Sbjct: 131 HALPTGNDS 139


>gi|262052893|ref|ZP_06025076.1| prophage L54a, major capsid protein, putative [Staphylococcus
           aureus 930918-3]
 gi|259159200|gb|EEW44261.1| prophage L54a, major capsid protein, putative [Staphylococcus
           aureus 930918-3]
 gi|283469603|emb|CAQ48814.1| phage major capsid protein, HK97 [Staphylococcus aureus subsp.
           aureus ST398]
 gi|283470728|emb|CAQ49939.1| phage major capsid protein, HK97 [Staphylococcus aureus subsp.
           aureus ST398]
          Length = 387

 Score = 36.7 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 44/129 (34%), Gaps = 10/129 (7%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G          +   L+ K  DP++  ++ + K L  E+  L         
Sbjct: 6   ELKQSLGMIG-----QQLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 55

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ ++ D     +  +++   +                 Y+        E  S +A   +
Sbjct: 56  VERQVQDIEEKEKAKVKDTGEAYQSLNDHEKMVKAKAEFYRHAILPNEFEKPSMEAQRLL 115

Query: 122 HAGAGGTES 130
           HA   G +S
Sbjct: 116 HALPTGNDS 124


>gi|189183342|ref|YP_001937127.1| peptide chain release factor RF-2 [Orientia tsutsugamushi str.
           Ikeda]
 gi|189180113|dbj|BAG39893.1| peptide chain release factor RF-2 [Orientia tsutsugamushi str.
           Ikeda]
          Length = 86

 Score = 36.7 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 23/50 (46%), Positives = 34/50 (68%)

Query: 242 HVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQK 291
            +N  D AV+ITHIPT ++ +C+  +S +KNK +A   L+  LYE EL+K
Sbjct: 17  DINPVDYAVKITHIPTSIITECRSYKSHYKNKIEAILSLKKTLYERELKK 66


>gi|315655737|ref|ZP_07908635.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Mobiluncus curtisii ATCC 51333]
 gi|315489801|gb|EFU79428.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Mobiluncus curtisii ATCC 51333]
          Length = 560

 Score = 36.7 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 50/189 (26%), Gaps = 14/189 (7%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           +    + R + ++ +  DP       +   LM E   L  AI               +  
Sbjct: 95  EIKAKLDRYNEISAQMADPD-----ADFDALMEEMGQLQEAIDAADAWDLDSQLEQAMDA 149

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           L     D  +   +    +R+ L     +   LL  +  +N             ES  W 
Sbjct: 150 LRCPPADADVKTLSGGERRRVALCKLLLEAPDLLLLDEPTNHL---------DAESVLWL 200

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
              L  Y             L+   G  A +    L     N   +L+ +Q    +    
Sbjct: 201 EQHLSQYKGAVIAVTHDRYFLDHVAGWIAEVDRGHLYPYEGNYSTYLEKKQERLEVQGRK 260

Query: 195 PYDSNSRRH 203
                 R  
Sbjct: 261 DAKLQKRLK 269


>gi|270307641|ref|YP_003329699.1| ABC transporter, ATP-binding protein [Dehalococcoides sp. VS]
 gi|270153533|gb|ACZ61371.1| ABC transporter, ATP-binding protein [Dehalococcoides sp. VS]
          Length = 663

 Score = 36.7 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 23/61 (37%), Gaps = 1/61 (1%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN-AISFIKEIQDRLCDNLILL 73
           +  N  QR   L T   DP L+++  +A     E ++     ++   +       N  L 
Sbjct: 592 EITNLEQRKQELETLLADPDLYRSGQKAADTSAEYKNCKEQLVTLGDKWLKLCQQNDALK 651

Query: 74  E 74
           +
Sbjct: 652 Q 652


>gi|167646499|ref|YP_001684162.1| ABC transporter-like protein [Caulobacter sp. K31]
 gi|167348929|gb|ABZ71664.1| ABC transporter related [Caulobacter sp. K31]
          Length = 627

 Score = 36.7 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 24/59 (40%), Gaps = 2/59 (3%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           L R++     +       ++L+ L  +  DP L++N  +   L + R +    +   + 
Sbjct: 557 LKRKIEAAEQV--VTRTTRQLAELEAQLADPQLYKNPAKVAELTKRRDNAKAKLDEAEA 613


>gi|87120298|ref|ZP_01076193.1| ABC transporter, ATP-binding protein [Marinomonas sp. MED121]
 gi|86164401|gb|EAQ65671.1| ABC transporter, ATP-binding protein [Marinomonas sp. MED121]
          Length = 640

 Score = 36.7 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 11/80 (13%)

Query: 2   KLSRQLNCLGGLFDWDNA-----VQRLSFLNTKTEDPHLWQ--NVIEAKMLM----RERQ 50
           +L +QL  L  L +          ++L  ++ K  D  L+   N  + + L+    + ++
Sbjct: 557 ELRQQLRPLRKLVEKHEKAVHKAQEKLDEISEKMADADLYDVTNKDKLQALLTDEAKWKK 616

Query: 51  HLDNAISFIKEIQDRLCDNL 70
            LD       E Q+ L +  
Sbjct: 617 ELDENEEAWFEAQESLEEAE 636


>gi|325124408|gb|ADY83931.1| transport protein (ABC superfamily, atp_bind) [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 636

 Score = 36.3 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 7/55 (12%), Positives = 17/55 (30%), Gaps = 5/55 (9%)

Query: 15  DWDNAVQRLSFLNTKTEDPH-LWQNVIEAKMLMRERQHLDNA----ISFIKEIQD 64
           + +      + L+ K  D      N  EA    +    ++      +    E++ 
Sbjct: 577 EIEKLEVEQAELSDKLADGSWFVSNADEATKASQRLAEIEEVLLEKLERWDELEQ 631


>gi|154420334|ref|XP_001583182.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121917422|gb|EAY22196.1| hypothetical protein TVAG_093700 [Trichomonas vaginalis G3]
          Length = 3556

 Score = 36.3 bits (82), Expect = 6.3,   Method: Composition-based stats.
 Identities = 15/157 (9%), Positives = 49/157 (31%), Gaps = 11/157 (7%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQ--HLDNAISFI 59
           +L ++   L    +  +       +        +     + + ++ E +   L  A+   
Sbjct: 517 ELRKKFKELADALNKKHVK---DEIEAAKHKEEV---RKKWEEVLSELKKQELQKALDKH 570

Query: 60  KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYL 119
            EIQ +  D          +DD    ++  ++ ++ +         +             
Sbjct: 571 NEIQKKWEDLSKAQLKKQRQDDMQKEKQKLEDGKKWQELARNYMKMARTYVLKAGRKYID 630

Query: 120 EVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
           +  A     +S+  +  ++R +    + R +  ++  
Sbjct: 631 DSRAK---LKSRKLSRAVVREWNALTQSRDYVRDSYN 664


>gi|258427136|ref|ZP_05688058.1| bacteriophage capsid protein [Staphylococcus aureus A9299]
 gi|257849914|gb|EEV73873.1| bacteriophage capsid protein [Staphylococcus aureus A9299]
          Length = 402

 Score = 36.3 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 44/129 (34%), Gaps = 10/129 (7%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G          +   L+ K  DP++  ++ + K L  E+  L         
Sbjct: 21  ELKQSLGMIG-----QQLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ ++ D     +  +++   +                 Y+        E  S +A   +
Sbjct: 71  VERQVQDIEEKEKAKVKDTGEAYQSLNDHEKMVKAKAEFYRHAILPNEFEKPSMEAQRLL 130

Query: 122 HAGAGGTES 130
           HA   G +S
Sbjct: 131 HALPTGNDS 139


>gi|225561854|gb|EEH10134.1| RNA polymerase Rpb1 C-terminal repeat domain-containing protein
           [Ajellomyces capsulatus G186AR]
          Length = 1389

 Score = 36.3 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 42/156 (26%), Gaps = 17/156 (10%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL-DNAISFIK 60
           KL  ++N L   F+     ++   +     D         A+    E   L ++    I 
Sbjct: 570 KLKGRINELR--FELGGLQEKQKDVEESLAD---------AQKENDELSQLREDLQEEID 618

Query: 61  EIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
            +Q  + +     E  LE       +E        + +     F+ + + +       L+
Sbjct: 619 NLQRAIQEEKEAHEQELER-----QREKEKEALDNQKQDLEGYFQEIKNEDDRLAAEQLQ 673

Query: 121 VHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEALE 156
                   E       L        E +       E
Sbjct: 674 AREQELTDERDKLKAELEAEMRELTEAKDAMATDYE 709


>gi|213966249|ref|ZP_03394433.1| DNA gyrase, A subunit [Corynebacterium amycolatum SK46]
 gi|213951101|gb|EEB62499.1| DNA gyrase, A subunit [Corynebacterium amycolatum SK46]
          Length = 867

 Score = 36.3 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 21/60 (35%), Gaps = 8/60 (13%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFI 59
           M+L  +L  L         +  L+ +  +  D   +  N    + +++E   L   +   
Sbjct: 443 MQLR-RLAALER----QKIIDELAEIELEIADLKDILANPDRQRAIVKE--ELGEVVEKY 495


>gi|150007908|ref|YP_001302651.1| putative ABC transporter ATP-binding protein [Parabacteroides
           distasonis ATCC 8503]
 gi|255013404|ref|ZP_05285530.1| putative ABC transporter ATP-binding protein [Bacteroides sp.
           2_1_7]
 gi|256840153|ref|ZP_05545662.1| ABC transporter ATP-binding protein [Parabacteroides sp. D13]
 gi|262381528|ref|ZP_06074666.1| ABC transporter ATP-binding protein [Bacteroides sp. 2_1_33B]
 gi|298376745|ref|ZP_06986700.1| ABC transporter, ATP-binding protein [Bacteroides sp. 3_1_19]
 gi|301310049|ref|ZP_07215988.1| ABC transporter, ATP-binding protein [Bacteroides sp. 20_3]
 gi|149936332|gb|ABR43029.1| ABC transporter ATP-binding protein [Parabacteroides distasonis
           ATCC 8503]
 gi|256739083|gb|EEU52408.1| ABC transporter ATP-binding protein [Parabacteroides sp. D13]
 gi|262296705|gb|EEY84635.1| ABC transporter ATP-binding protein [Bacteroides sp. 2_1_33B]
 gi|298266623|gb|EFI08281.1| ABC transporter, ATP-binding protein [Bacteroides sp. 3_1_19]
 gi|300831623|gb|EFK62254.1| ABC transporter, ATP-binding protein [Bacteroides sp. 20_3]
          Length = 562

 Score = 36.3 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 33/100 (33%)

Query: 21  QRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEED 80
           +    +N +  DP + ++  +   L+  +  L + I               +  L    +
Sbjct: 105 KEYEEVNERFGDPEVLEDPDKMDALINRQAELQDKIDATDAWNLDSRLERAMDALRCPPE 164

Query: 81  DCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
           D  +   +    +R+ L     Q   +L  +  +N    E
Sbjct: 165 DQVVDTLSGGERRRVALCRLLLQQPDVLLLDEPTNHLDAE 204


>gi|299143299|ref|ZP_07036379.1| ABC transporter, ATP-binding protein [Peptoniphilus sp. oral taxon
           386 str. F0131]
 gi|298517784|gb|EFI41523.1| ABC transporter, ATP-binding protein [Peptoniphilus sp. oral taxon
           386 str. F0131]
          Length = 628

 Score = 36.3 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 7/51 (13%), Positives = 22/51 (43%), Gaps = 4/51 (7%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQ----HLDNAISFIKEIQD 64
                ++ ++ +   P ++ N+ + + L + R      L+N      E+++
Sbjct: 578 KIESEINEIDIELSVPEIYNNIEKVQKLSQTRNVKNEELENLYEAWFEMEN 628


>gi|229825501|ref|ZP_04451570.1| hypothetical protein GCWU000182_00861 [Abiotrophia defectiva ATCC
           49176]
 gi|229790064|gb|EEP26178.1| hypothetical protein GCWU000182_00861 [Abiotrophia defectiva ATCC
           49176]
          Length = 637

 Score = 36.3 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 27/66 (40%), Gaps = 5/66 (7%)

Query: 2   KLSRQLNCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQ----HLDNAI 56
           +L +  N L  + D         + L  K  +P +  +V +   L +++      +++ +
Sbjct: 568 ELRKIGNELKKIEDEVAKLESENTELEEKLAEPSIASDVGKLMELHKQKTANDERIESLL 627

Query: 57  SFIKEI 62
              +E+
Sbjct: 628 ERWEEL 633


>gi|229552962|ref|ZP_04441687.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus rhamnosus LMS2-1]
 gi|229313651|gb|EEN79624.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus rhamnosus LMS2-1]
          Length = 656

 Score = 36.3 bits (82), Expect = 6.4,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 13/38 (34%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53
                +++  L  K  DP L  +       M++   L 
Sbjct: 100 LQAMARQIHDLEAKLGDPKLIADQAAFAATMKQYDQLQ 137


>gi|293610229|ref|ZP_06692530.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827461|gb|EFF85825.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 640

 Score = 36.3 bits (82), Expect = 6.5,   Method: Composition-based stats.
 Identities = 7/55 (12%), Positives = 17/55 (30%), Gaps = 5/55 (9%)

Query: 15  DWDNAVQRLSFLNTKTEDPH-LWQNVIEAKMLMRERQHLDNA----ISFIKEIQD 64
           + +      + L+ K  D      N  EA    +    ++      +    E++ 
Sbjct: 581 EIEKLEVEQAELSDKLADGSWFVSNADEATKASQRLAEIEEVLLEKLERWDELEQ 635


>gi|317485616|ref|ZP_07944492.1| ABC transporter [Bilophila wadsworthia 3_1_6]
 gi|316923153|gb|EFV44363.1| ABC transporter [Bilophila wadsworthia 3_1_6]
          Length = 671

 Score = 36.3 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 5/39 (12%), Positives = 15/39 (38%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN 54
            +  +   S +     DP ++ +  +   L+++   L  
Sbjct: 598 LEALLTEQSDVEAALADPEVYADGNKTTELLKKFSQLKE 636


>gi|218887467|ref|YP_002436788.1| ABC transporter [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218758421|gb|ACL09320.1| ABC transporter related [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 660

 Score = 36.3 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 6/60 (10%), Positives = 22/60 (36%), Gaps = 4/60 (6%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL----DNAISFIKEIQDRLCDNLI 71
            + ++   + +     DP ++ + +    L++    L    +     + E++  + D   
Sbjct: 591 LETSLAEQAEVEQTLADPAVYADSVRTTELLKRFGELQRQGEELFEKMSELEAVIADLET 650


>gi|282921758|ref|ZP_06329475.1| phage major capsid protein [Staphylococcus aureus A9765]
 gi|282594020|gb|EFB99009.1| phage major capsid protein [Staphylococcus aureus A9765]
          Length = 402

 Score = 36.3 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 44/129 (34%), Gaps = 10/129 (7%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G          +   L+ K  DP++  ++ + K L  E+  L         
Sbjct: 21  ELKQSLGMIG-----QQLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ ++ D     +  +++   +                 Y+        E  S +A   +
Sbjct: 71  VERQVQDIEEKEKAKVKDTGEAYQSLNDHEKMVKAKAEFYRHAILPNEFEKPSMEAQRLL 130

Query: 122 HAGAGGTES 130
           HA   G +S
Sbjct: 131 HALPTGNDS 139


>gi|295402744|ref|ZP_06812684.1| ABC transporter related protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312112513|ref|YP_003990829.1| ABC transporter [Geobacillus sp. Y4.1MC1]
 gi|294975208|gb|EFG50846.1| ABC transporter related protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311217614|gb|ADP76218.1| ABC transporter related protein [Geobacillus sp. Y4.1MC1]
          Length = 644

 Score = 36.3 bits (82), Expect = 6.6,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 14/39 (35%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN 54
                 +L  +  +  DP L  +    K L+++   L  
Sbjct: 94  LKEMETQLREMELQMGDPDLLADSSRYKKLLKDYDTLQE 132


>gi|170578563|ref|XP_001894460.1| peptide chain release factor 2, programmed [Brugia malayi]
 gi|170584020|ref|XP_001896825.1| peptide chain release factor 2, programmed [Brugia malayi]
 gi|158595842|gb|EDP34329.1| peptide chain release factor 2, programmed, putative [Brugia
           malayi]
 gi|158598945|gb|EDP36701.1| peptide chain release factor 2, programmed, putative [Brugia
           malayi]
          Length = 93

 Score = 36.3 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 4/94 (4%)

Query: 39  VIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLE 98
                 +++E   + N I    +++    D + L++  ++E+D     E  + L + +  
Sbjct: 4   QPRGTRILKEYSKIKNDIESFSKLESDYNDAISLMKSTIDENDEEFFSEIENELLKSEKL 63

Query: 99  VEYKQFESLLSGEADSNDAYLEVHAGAGGTESQD 132
           V+ K+   L +  AD      E+H+G GGTES D
Sbjct: 64  VKRKETNFLFTDGAD----NTEIHSGVGGTESDD 93


>gi|258540427|ref|YP_003174926.1| ABC transporter ATPase [Lactobacillus rhamnosus Lc 705]
 gi|257152103|emb|CAR91075.1| ABC transporter, ATPase component [Lactobacillus rhamnosus Lc 705]
          Length = 650

 Score = 36.3 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 13/38 (34%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53
                +++  L  K  DP L  +       M++   L 
Sbjct: 94  LQAMARQIHDLEAKLGDPKLIADQAAFAATMKQYDQLQ 131


>gi|126640122|ref|YP_001083106.1| putative transport protein [Acinetobacter baumannii ATCC 17978]
          Length = 622

 Score = 36.3 bits (82), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/59 (15%), Positives = 20/59 (33%), Gaps = 4/59 (6%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLMRERQHLDNAISFI 59
           + + +  +      +    RL+ +     DP L+      +   LM E+  L   +   
Sbjct: 546 IRKNIEKVES--QIEKLQPRLAQIEEALADPSLYEANRKEDLLKLMNEQTELKAKLEQY 602


>gi|325104509|ref|YP_004274163.1| ABC transporter related protein [Pedobacter saltans DSM 12145]
 gi|324973357|gb|ADY52341.1| ABC transporter related protein [Pedobacter saltans DSM 12145]
          Length = 559

 Score = 36.3 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 7/49 (14%), Positives = 20/49 (40%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
           +  + ++    +N K   P ++++      LM  +  L + I  +   +
Sbjct: 98  EIVDILKEYEEINEKFGLPEVYEDADAMDKLMTRQGELQDKIDAVNAWE 146


>gi|199599044|ref|ZP_03212451.1| ATPase component of ABC transporter with duplicated ATPase domains
           [Lactobacillus rhamnosus HN001]
 gi|199590080|gb|EDY98179.1| ATPase component of ABC transporter with duplicated ATPase domains
           [Lactobacillus rhamnosus HN001]
          Length = 650

 Score = 36.3 bits (82), Expect = 6.8,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 13/38 (34%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53
                +++  L  K  DP L  +       M++   L 
Sbjct: 94  LQAMARQIHDLEAKLGDPKLIADQAAFAATMKQYDQLQ 131


>gi|258445569|ref|ZP_05693751.1| bacteriophage capsid protein [Staphylococcus aureus A6300]
 gi|257855616|gb|EEV78549.1| bacteriophage capsid protein [Staphylococcus aureus A6300]
          Length = 402

 Score = 36.3 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 44/129 (34%), Gaps = 10/129 (7%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G          +   L+ K  DP++  ++ + K L  E+  L         
Sbjct: 21  ELKQSLGMIG-----QQLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ ++ D     +  +++   +                 Y+        E  S +A   +
Sbjct: 71  VERQVQDIEEKEKAKVKDTGEAYQSLNDHEKMVKAKAEFYRHAILPNEFEKPSMEAQRLL 130

Query: 122 HAGAGGTES 130
           HA   G +S
Sbjct: 131 HALPTGNDS 139


>gi|193075927|gb|ABO10504.2| putative transport protein [Acinetobacter baumannii ATCC 17978]
          Length = 643

 Score = 36.3 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 9/59 (15%), Positives = 20/59 (33%), Gaps = 4/59 (6%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLMRERQHLDNAISFI 59
           + + +  +      +    RL+ +     DP L+      +   LM E+  L   +   
Sbjct: 567 IRKNIEKVES--QIEKLQPRLAQIEEALADPSLYEANRKEDLLKLMNEQTELKAKLEQY 623


>gi|258509243|ref|YP_003171994.1| ABC transporter ATP-binding protein [Lactobacillus rhamnosus GG]
 gi|257149170|emb|CAR88143.1| ABC transporter, ATP-binding protein [Lactobacillus rhamnosus GG]
 gi|259650525|dbj|BAI42687.1| ABC transporter ATP-binding component [Lactobacillus rhamnosus GG]
          Length = 650

 Score = 36.3 bits (82), Expect = 7.0,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 13/38 (34%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53
                +++  L  K  DP L  +       M++   L 
Sbjct: 94  LQAMARQIHDLEAKLGDPKLIADQAAFAATMKQYDQLQ 131


>gi|329955552|ref|ZP_08296460.1| ATP-dependent chaperone protein ClpB [Bacteroides clarus YIT 12056]
 gi|328525955|gb|EGF52979.1| ATP-dependent chaperone protein ClpB [Bacteroides clarus YIT 12056]
          Length = 864

 Score = 36.3 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 14/133 (10%), Positives = 37/133 (27%), Gaps = 12/133 (9%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK-----------EIQ 63
           + D   +++  L  + E      +  + + + +E   L       K           +IQ
Sbjct: 409 ELDEISRKIKQLEIEREAIKRENDQPKLEQIGKELAELKEQEKSYKAKWQSEKTLVNKIQ 468

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
               +   L   A + +           ++  KL+   ++ E       +       +  
Sbjct: 469 QNKVEIENLKFEADKAEREGDYG-KVAEIRYGKLQALNQEIEETQQKLHEMQGDKAMIKE 527

Query: 124 GAGGTESQDWANM 136
                +  D  + 
Sbjct: 528 EVDAEDIADVVSR 540


>gi|332828901|gb|EGK01584.1| hypothetical protein HMPREF9455_02116 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 647

 Score = 36.3 bits (82), Expect = 7.2,   Method: Composition-based stats.
 Identities = 8/68 (11%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           ++ +Q++ L  L   +     ++ +  K   P    +    +   +  + L + +   +E
Sbjct: 579 RVEKQISELEQL--IEKKESHIAEIEVKLTSPEGAADASLFEKHGQLTKELQDDMKHWEE 636

Query: 62  IQDRLCDN 69
           +   L + 
Sbjct: 637 LTVELENM 644


>gi|31874236|emb|CAD98013.1| hypothetical protein [Homo sapiens]
          Length = 1287

 Score = 36.3 bits (82), Expect = 7.2,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 46/113 (40%), Gaps = 5/113 (4%)

Query: 16  WDNAVQRLSFLNTKTED--PHLWQNVIEAKMLMRER-QHLDNAISFIKEIQDRLCDN--L 70
                 RL  L  ++ED  P L +++   K L++E  Q L +    +KE+Q    D    
Sbjct: 207 IKELKSRLQVLKAQSEDPLPELHEDLHNEKELIKELEQSLASWTQNLKELQTMKADLTRH 266

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           +L+E  +   +             +++ +  ++ E  L+     N+   E+ A
Sbjct: 267 VLVEDVMVLKEQIEHLHRQWEDLCLRVAIRKQEIEDRLNTWVVFNEKNKELCA 319


>gi|238925289|ref|YP_002938806.1| ABC transporter, ATP-binding protein [Eubacterium rectale ATCC
           33656]
 gi|238876965|gb|ACR76672.1| ABC transporter, ATP-binding protein [Eubacterium rectale ATCC
           33656]
          Length = 682

 Score = 36.3 bits (82), Expect = 7.2,   Method: Composition-based stats.
 Identities = 10/72 (13%), Positives = 23/72 (31%), Gaps = 6/72 (8%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI----S 57
           K+ +++       D      +L  L  +   P    +  +   +  E   L+  I     
Sbjct: 612 KIQKKVKKAEE--DLAVKEAKLDELKAELMKPEYQSSYSKLTEIQNEIDSLEEEILIDME 669

Query: 58  FIKEIQDRLCDN 69
             +E+  +L   
Sbjct: 670 AWEELSSQLEAL 681


>gi|146421313|ref|XP_001486606.1| hypothetical protein PGUG_02277 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 171

 Score = 36.3 bits (82), Expect = 7.2,   Method: Composition-based stats.
 Identities = 27/56 (48%), Positives = 37/56 (66%)

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
               G GGQ +N ++S V++THIPTG VV CQ  RSQ +N+ +A  +L  KL EL+
Sbjct: 48  KGGRGPGGQKINKSNSKVQLTHIPTGTVVTCQYSRSQEQNRKKAREILALKLEELQ 103


>gi|313884055|ref|ZP_07817821.1| putative lipoprotein [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620502|gb|EFR31925.1| putative lipoprotein [Eremococcus coleocola ACS-139-V-Col8]
          Length = 310

 Score = 36.3 bits (82), Expect = 7.3,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 20/53 (37%), Gaps = 2/53 (3%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCD 68
            +    RL  +    +D  +       + L  E+  L++ I  ++  QD   +
Sbjct: 149 LEELNNRLKEVEEDLKDEDITLEQK--QALRAEKNSLEDQIKALENQQDSTNE 199


>gi|119601245|gb|EAW80839.1| spectrin repeat containing, nuclear envelope 2, isoform CRA_b [Homo
           sapiens]
          Length = 1268

 Score = 36.3 bits (82), Expect = 7.3,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 46/113 (40%), Gaps = 5/113 (4%)

Query: 16  WDNAVQRLSFLNTKTED--PHLWQNVIEAKMLMRER-QHLDNAISFIKEIQDRLCDN--L 70
                 RL  L  ++ED  P L +++   K L++E  Q L +    +KE+Q    D    
Sbjct: 184 IKELKSRLQVLKAQSEDPLPELHEDLHNEKELIKELEQSLASWTQNLKELQTMKADLTRH 243

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           +L+E  +   +             +++ +  ++ E  L+     N+   E+ A
Sbjct: 244 VLVEDVMVLKEQIEHLHRQWEDLCLRVAIRKQEIEDRLNTWVVFNEKNKELCA 296


>gi|303252551|ref|ZP_07338714.1| putative ABC transporter ATP-binding protein YheS [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307247301|ref|ZP_07529349.1| Uncharacterized ABC transporter ATP-binding protein [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|302648519|gb|EFL78712.1| putative ABC transporter ATP-binding protein YheS [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|306856145|gb|EFM88300.1| Uncharacterized ABC transporter ATP-binding protein [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
          Length = 638

 Score = 36.3 bits (82), Expect = 7.4,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 7/75 (9%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAK---MLMRERQHLDNAISFI 59
           L +++  L    D + A ++L+ L        +++   +A+    L ++ +    A+  I
Sbjct: 566 LRKKITQLEK--DLEKASEKLNQLEALLASSEIYEAENKAQLTETLAKQIEE-KKAVEEI 622

Query: 60  K-EIQDRLCDNLILL 73
           + E  D       LL
Sbjct: 623 EMEWLDCQEQLEALL 637


>gi|190346160|gb|EDK38179.2| hypothetical protein PGUG_02277 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 171

 Score = 36.3 bits (82), Expect = 7.4,   Method: Composition-based stats.
 Identities = 27/56 (48%), Positives = 37/56 (66%)

Query: 233 YRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELE 288
               G GGQ +N ++S V++THIPTG VV CQ  RSQ +N+ +A  +L  KL EL+
Sbjct: 48  KGGRGPGGQKINKSNSKVQLTHIPTGTVVTCQYSRSQEQNRKKAREILALKLEELQ 103


>gi|114653468|ref|XP_001169926.1| PREDICTED: spectrin repeat containing, nuclear envelope 2 isoform 2
            [Pan troglodytes]
          Length = 2776

 Score = 36.3 bits (82), Expect = 7.4,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 46/113 (40%), Gaps = 5/113 (4%)

Query: 16   WDNAVQRLSFLNTKTED--PHLWQNVIEAKMLMRER-QHLDNAISFIKEIQDRLCDN--L 70
                  RL  L  ++ED  P L +++   K L++E  Q L +    +KE+Q    D    
Sbjct: 1711 IKELKSRLQVLKAQSEDPLPELHEDLHNEKELIKELEQSLASWTQNLKELQTMKADLTRH 1770

Query: 71   ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            +L+E  +   +             +++ +  ++ E  L+     N+   E+ A
Sbjct: 1771 VLVEDVMVLKEQIEHLHRQWEDLCLRVAIRKQEIEDRLNTWVVFNEKNKELCA 1823


>gi|165975766|ref|YP_001651359.1| ABC transporter ATP-binding protein [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|165875867|gb|ABY68915.1| probable ABC transporter ATP-binding protein [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
          Length = 638

 Score = 36.3 bits (82), Expect = 7.4,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 7/75 (9%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAK---MLMRERQHLDNAISFI 59
           L +++  L    D + A ++L+ L        +++   +A+    L ++ +    A+  I
Sbjct: 566 LRKKITQLEK--DLEKASEKLNQLEALLASSEIYEAENKAQLTETLAKQIEE-KKAVEEI 622

Query: 60  K-EIQDRLCDNLILL 73
           + E  D       LL
Sbjct: 623 EMEWLDCQEQLEALL 637


>gi|329922623|ref|ZP_08278175.1| ABC transporter, ATP-binding protein [Paenibacillus sp. HGF5]
 gi|328941965|gb|EGG38248.1| ABC transporter, ATP-binding protein [Paenibacillus sp. HGF5]
          Length = 653

 Score = 36.3 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 14/47 (29%)

Query: 12  GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58
           GL         ++ L  +  DP +  N      ++R    L      
Sbjct: 90  GLIHLKEYRAEMTELEKRMSDPGIAGNSELLDRVLRRYSALQERFET 136


>gi|261392625|emb|CAX50189.1| putative ABC transporter ATP-binding protein [Neisseria
           meningitidis 8013]
 gi|325204096|gb|ADY99549.1| ABC transporter, ATP-binding protein Uup [Neisseria meningitidis
           M01-240355]
          Length = 636

 Score = 36.3 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 5/57 (8%), Positives = 22/57 (38%), Gaps = 4/57 (7%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLC 67
           +        + +N +  DP ++++  +A  L    + ++      +   + ++ +  
Sbjct: 576 EIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLETKQN 632


>gi|12719433|ref|NP_075504.1| hypothetical protein phiSLTp42 [Staphylococcus phage phiSLT]
 gi|21283127|ref|NP_646215.1| hypothetical protein MW1398 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49483693|ref|YP_040917.1| hypothetical protein SAR1516 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49485841|ref|YP_043062.1| hypothetical protein SAS0935 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57651297|ref|YP_185262.1| prophage L54a, major capsid protein, putative [Staphylococcus
           aureus subsp. aureus COL]
 gi|66395517|ref|YP_239859.1| ORF009 [Staphylococcus phage 42E]
 gi|66395666|ref|YP_240005.1| ORF010 [Staphylococcus phage 47]
 gi|87161729|ref|YP_494098.1| phiSLT ORF387-like protein, putative phage capsid protein
           [Staphylococcus aureus subsp. aureus USA300_FPR3757]
 gi|88195248|ref|YP_500051.1| hypothetical protein SAOUHSC_01535 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|215401149|ref|YP_002332404.1| major head protein [Staphylococcus phage phiSauS-IPLA35]
 gi|253315474|ref|ZP_04838687.1| phiSLT ORF387-like protein, putative phage capsid protein
           [Staphylococcus aureus subsp. aureus str. CF-Marseille]
 gi|284024508|ref|ZP_06378906.1| phiSLT ORF387-like protein, putative phage capsid protein
           [Staphylococcus aureus subsp. aureus 132]
 gi|295428017|ref|ZP_06820649.1| hypothetical protein SIAG_00543 [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|296276331|ref|ZP_06858838.1| phiSLT ORF387-like protein, putative phage capsid protein
           [Staphylococcus aureus subsp. aureus MR1]
 gi|12697863|dbj|BAB21735.1| unnamed protein product [Staphylococcus phage phiSLT]
 gi|21204567|dbj|BAB95263.1| hypothetical protein [Staphylococcus aureus subsp. aureus MW2]
 gi|49241822|emb|CAG40514.1| hypothetical phage protein [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49244284|emb|CAG42711.1| hypothetical phage protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57285483|gb|AAW37577.1| prophage L54a, major capsid protein, putative [Staphylococcus
           aureus subsp. aureus COL]
 gi|62636010|gb|AAX91121.1| ORF009 [Staphylococcus phage 42E]
 gi|62636090|gb|AAX91201.1| ORF010 [Staphylococcus phage 47]
 gi|87127703|gb|ABD22217.1| phiSLT ORF387-like protein, putative phage capsid protein
           [Staphylococcus aureus subsp. aureus USA300_FPR3757]
 gi|87202806|gb|ABD30616.1| conserved hypothetical phage protein [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|215260500|gb|ACJ64630.1| gp41 [Staphylococcus phage phiSauS-IPLA35]
 gi|295128375|gb|EFG58009.1| hypothetical protein SIAG_00543 [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|315128435|gb|EFT84443.1| hypothetical protein CGSSa03_13332 [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|315197737|gb|EFU28071.1| hypothetical protein CGSSa01_10798 [Staphylococcus aureus subsp.
           aureus CGS01]
 gi|329729407|gb|EGG65812.1| phage capsid family [Staphylococcus aureus subsp. aureus 21189]
 gi|329730628|gb|EGG67013.1| phage capsid family [Staphylococcus aureus subsp. aureus 21193]
          Length = 387

 Score = 36.3 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 46/129 (35%), Gaps = 10/129 (7%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G          +   L+ K  DP++  ++ + K L  E+  L         
Sbjct: 6   ELKQSLGMIG-----QQLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 55

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ ++ D     +  +++   +    + +          Y+        E  S +A   +
Sbjct: 56  VERQVQDIEEKEKAKVKDKGEAYQSLSDNEKMVKAKAEFYRHAILPNEFEKPSMEAQRLL 115

Query: 122 HAGAGGTES 130
           HA   G +S
Sbjct: 116 HALPTGNDS 124


>gi|227522520|ref|ZP_03952569.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus hilgardii ATCC 8290]
 gi|227090342|gb|EEI25654.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus hilgardii ATCC 8290]
          Length = 648

 Score = 36.3 bits (82), Expect = 7.6,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 32/73 (43%), Gaps = 6/73 (8%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS---- 57
           KL+R++  L      D   +  + + ++   P ++ ++ +A  L ++ + +D  I     
Sbjct: 578 KLNREVIDLES--QLDELSKSKNNIESQMAQPEVFNDLDKASDLQKKLEMIDQKIKETES 635

Query: 58  FIKEIQDRLCDNL 70
             ++   +L D  
Sbjct: 636 KWEQKSLQLEDIE 648


>gi|19112609|ref|NP_595817.1| SWI/SNF and RSC complex subunit Ssr4 [Schizosaccharomyces pombe
           972h-]
 gi|74625443|sp|Q9P7Y0|SSR4_SCHPO RecName: Full=SWI/SNF and RSC complexes subunit ssr4
 gi|6723959|emb|CAB66433.1| SWI/SNF and RSC complex subunit Ssr4 [Schizosaccharomyces pombe]
          Length = 395

 Score = 36.3 bits (82), Expect = 7.6,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 29/90 (32%), Gaps = 1/90 (1%)

Query: 28  TKTEDPHLWQNVIEAKMLMRERQH-LDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
              E P LWQ     + L +E +   +  +   ++ Q    D      ++    + S ++
Sbjct: 306 KDIEPPALWQEPNSMEELGKELKDNKEQLVKQDQKYQSLQGDLSYTDSMSNLLKEFSNIK 365

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSND 116
              +     K   E+ + + +         
Sbjct: 366 SAEECDVLQKKIEEFAEAKIVPLSHVTERS 395


>gi|325202191|gb|ADY97645.1| ABC transporter, ATP-binding protein Uup [Neisseria meningitidis
           M01-240149]
          Length = 636

 Score = 36.3 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 5/57 (8%), Positives = 22/57 (38%), Gaps = 4/57 (7%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLC 67
           +        + +N +  DP ++++  +A  L    + ++      +   + ++ +  
Sbjct: 576 EIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLETKQN 632


>gi|303249531|ref|ZP_07335738.1| putative ABC transporter ATP-binding protein YheS [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307251842|ref|ZP_07533743.1| Uncharacterized ABC transporter ATP-binding protein [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|302651605|gb|EFL81754.1| putative ABC transporter ATP-binding protein YheS [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306860534|gb|EFM92546.1| Uncharacterized ABC transporter ATP-binding protein [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 638

 Score = 36.3 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 7/75 (9%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAK---MLMRERQHLDNAISFI 59
           L +++  L    D + A ++L+ L        +++   +A+    L ++ +    A+  I
Sbjct: 566 LRKKITQLEK--DLEKASEKLNQLEALLASSEIYEAENKAQLTETLAKQIEE-KKAVEEI 622

Query: 60  K-EIQDRLCDNLILL 73
           + E  D       LL
Sbjct: 623 EMEWLDCQEQLEALL 637


>gi|302340442|ref|YP_003805648.1| hypothetical protein Spirs_3969 [Spirochaeta smaragdinae DSM 11293]
 gi|301637627|gb|ADK83054.1| hypothetical protein Spirs_3969 [Spirochaeta smaragdinae DSM 11293]
          Length = 311

 Score = 36.3 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 8/76 (10%), Positives = 27/76 (35%), Gaps = 2/76 (2%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           + ++   R   L  + ++  +   V   +  ++E + +++ ++  +E+ D   +   L  
Sbjct: 149 NVEDVSDRYYDLEHRIKNKEIL--VERYQKYLQEAKSVEDLLTVERELNDATTELEQLKG 206

Query: 75  LALEEDDCSILQETSD 90
                D          
Sbjct: 207 SFQNLDHRVSFSTLHM 222


>gi|290998351|ref|XP_002681744.1| predicted protein [Naegleria gruberi]
 gi|284095369|gb|EFC49000.1| predicted protein [Naegleria gruberi]
          Length = 435

 Score = 36.3 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 32/303 (10%), Positives = 78/303 (25%), Gaps = 25/303 (8%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQ--HLDNAISFIKEIQDRLCDNLILLEL 75
              ++L  +  +             + ++++R    L N +    +I   L + +     
Sbjct: 97  EIAKQLETIYEQLV---FILTSKNIQDILQKRSNFDLRNLLGGTDKIIYSLINRMSNSID 153

Query: 76  ALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWAN 135
              +    +    +   Q   + ++ +    L+      ++  + +       +      
Sbjct: 154 FSFDSTHVLRLPKNTRNQIGDIMMKNRVQNKLMFSLMICDNTLVHMIRNK---KYNMKTK 210

Query: 136 MLLRMYTRWAEKRKFKTEALEIHDGEEAGIKS--ATLLIKGPNAYGWLKGEQGVHRLVRI 193
            LL +             +         G+                W      +      
Sbjct: 211 DLLLLMNFVGSAHSSMKSSETWTPICLPGLSETSYVYAYIIYFTENWCYVMICMSTESFF 270

Query: 194 SPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRIT 253
               S ++          +P V  +   + + S    D         +H N    +    
Sbjct: 271 DCQQSQTQTLHDLIQSECFPSVIFTNVRQTASSPTADDFLMTQT-FLRHFNCRIKST--- 326

Query: 254 HIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIR 313
              T  + Q    +       +       +LY+   +K E I N           G Q+R
Sbjct: 327 ---TISICQTCSTKFLPPYHTKKERKRILRLYKSTREKLESIPNKNI--------GSQVR 375

Query: 314 SYV 316
           +YV
Sbjct: 376 TYV 378


>gi|269203616|ref|YP_003282885.1| phage major capsid protein [Staphylococcus aureus subsp. aureus
           ED98]
 gi|262075906|gb|ACY11879.1| phage major capsid protein [Staphylococcus aureus subsp. aureus
           ED98]
          Length = 387

 Score = 36.3 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 45/129 (34%), Gaps = 10/129 (7%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G          +   L+ K  DP++  ++ + K L  E+  L         
Sbjct: 6   ELKQSLGMIG-----QQLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 55

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ ++ D     +  +++   +      +          Y+        E  S +A   +
Sbjct: 56  VERQVQDIEEKEKAKVKDTGEAYQSLNDNEKMVKAKAEFYRHAILPNEFEKPSMEAQRLL 115

Query: 122 HAGAGGTES 130
           HA   G +S
Sbjct: 116 HALPTGNDS 124


>gi|260592374|ref|ZP_05857832.1| DNA gyrase, A subunit [Prevotella veroralis F0319]
 gi|260535668|gb|EEX18285.1| DNA gyrase, A subunit [Prevotella veroralis F0319]
          Length = 862

 Score = 36.3 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 18/55 (32%), Gaps = 4/55 (7%)

Query: 6   QLNCLGGLFDWDNAVQRLSFLNTKTED-PHLWQNVIEAKMLMRERQHLDNAISFI 59
           +L+ L G    D   Q    L    +D   +  N    K +M+E   L       
Sbjct: 430 RLSQLTG-LRLDQLHQEFEELMQTIKDLQEILNNPERCKEVMKE--ELQEVKEKY 481


>gi|46143825|ref|ZP_00133952.2| COG0488: ATPase components of ABC transporters with duplicated
           ATPase domains [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|126207793|ref|YP_001053018.1| putative ABC transporter ATP-binding protein YheS [Actinobacillus
           pleuropneumoniae L20]
 gi|126096585|gb|ABN73413.1| putative ABC transporter ATP-binding protein YheS [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
          Length = 638

 Score = 36.3 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 7/75 (9%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAK---MLMRERQHLDNAISFI 59
           L +++  L    D + A ++L+ L        +++   +A+    L ++ +    A+  I
Sbjct: 566 LRKKITQLEK--DLEKASEKLNQLEALLASSEIYEAENKAQLTETLAKQIEE-KKAVEEI 622

Query: 60  K-EIQDRLCDNLILL 73
           + E  D       LL
Sbjct: 623 EMEWLDCQEQLEALL 637


>gi|254673185|emb|CBA08074.1| ABC transporter, ATP-binding protein [Neisseria meningitidis
           alpha275]
          Length = 636

 Score = 36.3 bits (82), Expect = 7.8,   Method: Composition-based stats.
 Identities = 5/57 (8%), Positives = 22/57 (38%), Gaps = 4/57 (7%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLC 67
           +        + +N +  DP ++++  +A  L    + ++      +   + ++ +  
Sbjct: 576 EIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLETKQN 632


>gi|149183960|ref|ZP_01862338.1| ABC transporter, ATP-binding protein [Bacillus sp. SG-1]
 gi|148848331|gb|EDL62603.1| ABC transporter, ATP-binding protein [Bacillus sp. SG-1]
          Length = 655

 Score = 36.3 bits (82), Expect = 7.8,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 8   NCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53
           + +  +FD      + L  L  +  DP ++++  +   +++E   + 
Sbjct: 96  DEMLSVFDDLRKLEEDLRKLEQQMADPAVYEHEEKYNRVLKEYDTIQ 142


>gi|5262574|emb|CAB45729.1| hypothetical protein [Homo sapiens]
          Length = 1092

 Score = 36.3 bits (82), Expect = 7.8,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 46/113 (40%), Gaps = 5/113 (4%)

Query: 16  WDNAVQRLSFLNTKTED--PHLWQNVIEAKMLMRER-QHLDNAISFIKEIQDRLCDN--L 70
                 RL  L  ++ED  P L +++   K L++E  Q L +    +KE+Q    D    
Sbjct: 26  IKELKSRLQVLKAQSEDPLPELHEDLHNEKELIKELEQSLASWTQNLKELQTMKADLTRH 85

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           +L+E  +   +             +++ +  ++ E  L+     N+   E+ A
Sbjct: 86  VLVEDVMVLKEQIEHLHRQWEDLCLRVAIRKQEIEDRLNTWVVFNEKNKELCA 138


>gi|325208055|gb|ADZ03507.1| ABC transporter, ATP-binding protein Uup [Neisseria meningitidis
           NZ-05/33]
          Length = 636

 Score = 36.3 bits (82), Expect = 7.9,   Method: Composition-based stats.
 Identities = 5/57 (8%), Positives = 22/57 (38%), Gaps = 4/57 (7%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLC 67
           +        + +N +  DP ++++  +A  L    + ++      +   + ++ +  
Sbjct: 576 EIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLETKQN 632


>gi|325136398|gb|EGC59006.1| ABC transporter, ATP-binding protein Uup [Neisseria meningitidis
           M0579]
          Length = 636

 Score = 36.3 bits (82), Expect = 7.9,   Method: Composition-based stats.
 Identities = 5/57 (8%), Positives = 22/57 (38%), Gaps = 4/57 (7%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLC 67
           +        + +N +  DP ++++  +A  L    + ++      +   + ++ +  
Sbjct: 576 EIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLETKQN 632


>gi|167036929|ref|YP_001664507.1| glycosyltransferase 36 associated [Thermoanaerobacter
            pseudethanolicus ATCC 33223]
 gi|320115348|ref|YP_004185507.1| glycosyltransferase 36 [Thermoanaerobacter brockii subsp. finnii
            Ako-1]
 gi|166855763|gb|ABY94171.1| glycosyltransferase 36 associated [Thermoanaerobacter
            pseudethanolicus ATCC 33223]
 gi|319928439|gb|ADV79124.1| glycosyltransferase 36 [Thermoanaerobacter brockii subsp. finnii
            Ako-1]
          Length = 2887

 Score = 36.3 bits (82), Expect = 7.9,   Method: Composition-based stats.
 Identities = 12/116 (10%), Positives = 42/116 (36%), Gaps = 8/116 (6%)

Query: 1    MKLSRQLNCLGGLFDWDNAVQRL--SFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISF 58
            ++L++ L     + + +   + +  + LN KT  P  W+  +    +  +    ++ +  
Sbjct: 1153 IELAKGLKDTIKMLNIEGITEDIFRNILNKKTLMPSDWE--VFLSKISEKLSSTEDEVGN 1210

Query: 59   IKEIQDRL----CDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
            I+ +++ +     +    L     ++     +      +  +     K+ E +   
Sbjct: 1211 IERLKNIIGALKREMKEFLAWTEFDERQKEQEIFKRYKEVFEEHSSPKELEKVYKN 1266


>gi|21748548|dbj|BAC03411.1| FLJ00347 protein [Homo sapiens]
          Length = 1752

 Score = 36.3 bits (82), Expect = 7.9,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 46/113 (40%), Gaps = 5/113 (4%)

Query: 16  WDNAVQRLSFLNTKTED--PHLWQNVIEAKMLMRER-QHLDNAISFIKEIQDRLCDN--L 70
                 RL  L  ++ED  P L +++   K L++E  Q L +    +KE+Q    D    
Sbjct: 687 IKELKSRLQVLKAQSEDPLPELHEDLHNEKELIKELEQSLASWTQNLKELQTMKADLTRH 746

Query: 71  ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
           +L+E  +   +             +++ +  ++ E  L+     N+   E+ A
Sbjct: 747 VLVEDVMVLKEQIEHLHRQWEDLCLRVAIRKQEIEDRLNTWVVFNEKNKELCA 799


>gi|307249525|ref|ZP_07531512.1| Uncharacterized ABC transporter ATP-binding protein [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306858380|gb|EFM90449.1| Uncharacterized ABC transporter ATP-binding protein [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
          Length = 638

 Score = 36.3 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 30/75 (40%), Gaps = 7/75 (9%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAK---MLMRERQHLDNAISFI 59
           L +++  L    D + A ++L+ L        +++   +A+    L ++      A+  I
Sbjct: 566 LRKKITQLEK--DLEKASEKLNQLEALLASSEIYEAENKAQLTETLAKQI-EAKKAVEEI 622

Query: 60  K-EIQDRLCDNLILL 73
           + E  D       LL
Sbjct: 623 EMEWLDCQEQLEALL 637


>gi|240949402|ref|ZP_04753743.1| putative ABC transporter ATP-binding protein YheS [Actinobacillus
           minor NM305]
 gi|240296151|gb|EER46807.1| putative ABC transporter ATP-binding protein YheS [Actinobacillus
           minor NM305]
          Length = 639

 Score = 36.3 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 28/75 (37%), Gaps = 5/75 (6%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLMRERQHLDNAISFIK 60
           L +++  L    D D A  +L+ L T      ++  +N  +    + ++      +  I+
Sbjct: 565 LRKKITQLEK--DLDKASTQLAELETLLASSEIYEAENKAKLTETLAKQVEAKQKVEQIE 622

Query: 61  -EIQDRLCDNLILLE 74
            E  +       +L 
Sbjct: 623 MEWLEAQEQLEFMLN 637


>gi|148263318|ref|YP_001230024.1| ABC transporter related [Geobacter uraniireducens Rf4]
 gi|146396818|gb|ABQ25451.1| ABC transporter related protein [Geobacter uraniireducens Rf4]
          Length = 645

 Score = 36.3 bits (82), Expect = 8.1,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 21/61 (34%), Gaps = 3/61 (4%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAIS-FIKEI 62
            ++L  L    + +     L+ L  +  +P  + +    +    E   L   I+    E 
Sbjct: 583 QKRLAELEA--EIEIKEGLLAGLEQRMAEPEFFADHEATRRTGEEHTALTARIAVLYGEW 640

Query: 63  Q 63
           +
Sbjct: 641 E 641


>gi|307245122|ref|ZP_07527215.1| Uncharacterized ABC transporter ATP-binding protein [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307254078|ref|ZP_07535925.1| Uncharacterized ABC transporter ATP-binding protein [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307258533|ref|ZP_07540270.1| Uncharacterized ABC transporter ATP-binding protein [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306854011|gb|EFM86223.1| Uncharacterized ABC transporter ATP-binding protein [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306863003|gb|EFM94950.1| Uncharacterized ABC transporter ATP-binding protein [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306867437|gb|EFM99288.1| Uncharacterized ABC transporter ATP-binding protein [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 638

 Score = 36.3 bits (82), Expect = 8.1,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 29/74 (39%), Gaps = 5/74 (6%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLMRERQHLDNAISFIK 60
           L +++  L    D + A ++L+ L        ++  +N  +    + ++     A+  I+
Sbjct: 566 LRKKITQLEK--DLEKASEKLNQLEALLASSEIYEAENKAQLTETLAKQIEAKKAVEEIE 623

Query: 61  -EIQDRLCDNLILL 73
            E  D       LL
Sbjct: 624 MEWLDCQEQLEALL 637


>gi|228472042|ref|ZP_04056810.1| ABC transporter domain protein [Capnocytophaga gingivalis ATCC
           33624]
 gi|228276654|gb|EEK15367.1| ABC transporter domain protein [Capnocytophaga gingivalis ATCC
           33624]
          Length = 563

 Score = 36.3 bits (82), Expect = 8.1,   Method: Composition-based stats.
 Identities = 5/46 (10%), Positives = 18/46 (39%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             ++  + +N        + +  + + LM ++  L + I  +   +
Sbjct: 103 KLLEEFNHINDLFGLEENYSDPDKMQKLMDKQAELQDKIDALNAWE 148


>gi|161869934|ref|YP_001599103.1| ABC transporter ATP-binding protein [Neisseria meningitidis 053442]
 gi|161595487|gb|ABX73147.1| ABC transporter ATP-binding protein [Neisseria meningitidis 053442]
          Length = 641

 Score = 36.3 bits (82), Expect = 8.1,   Method: Composition-based stats.
 Identities = 5/57 (8%), Positives = 22/57 (38%), Gaps = 4/57 (7%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLC 67
           +        + +N +  DP ++++  +A  L    + ++      +   + ++ +  
Sbjct: 581 EIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLETKQN 637


>gi|26553999|ref|NP_757933.1| translocase [Mycoplasma penetrans HF-2]
 gi|81846210|sp|Q8EVL6|SECA_MYCPE RecName: Full=Protein translocase subunit secA
 gi|26454007|dbj|BAC44337.1| preprotein translocase SecA [Mycoplasma penetrans HF-2]
          Length = 1405

 Score = 36.3 bits (82), Expect = 8.1,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 38/119 (31%), Gaps = 14/119 (11%)

Query: 8    NCLGGLFDWDNAVQRLSFLNTKT--EDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDR 65
              L  L   D+   RL  +N     EDP +            ER+ L+  +   +     
Sbjct: 1160 QELNTLLQLDDEKDRLEKINQLLNKEDPEVL-----------ERKELERQVE-FETPVYY 1207

Query: 66   LCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAG 124
            L D      L   +   +  +E S     +  E +  +FE  L    D      EV A 
Sbjct: 1208 LEDIPEGESLDNFKAMDNPHEEQSFEDNLVDEENQQLEFEEALDEVIDDGQFNDEVEAA 1266


>gi|325130163|gb|EGC52941.1| ABC transporter, ATP-binding protein Uup [Neisseria meningitidis
           OX99.30304]
          Length = 636

 Score = 36.3 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 5/57 (8%), Positives = 22/57 (38%), Gaps = 4/57 (7%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLC 67
           +        + +N +  DP ++++  +A  L    + ++      +   + ++ +  
Sbjct: 576 EIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLETKQN 632


>gi|195579744|ref|XP_002079721.1| GD24107 [Drosophila simulans]
 gi|194191730|gb|EDX05306.1| GD24107 [Drosophila simulans]
          Length = 1106

 Score = 36.3 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 37/125 (29%), Gaps = 8/125 (6%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRE-RQHLDNAISFIKE 61
           +  +L         D   +++  L  K +           + + +E +   +      + 
Sbjct: 589 IKEELKE--THLQLDERQKKIEELEEKLKQT-----QQSEQKVQQESQTSKEQLTELHQS 641

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           +Q+         EL    ++      +    Q  KL     Q E+  S   ++ D  LE 
Sbjct: 642 LQELQDSVKQKEELVQNLEEKVRESSSIIEGQNTKLNESNVQLENQTSCLKETQDQLLES 701

Query: 122 HAGAG 126
                
Sbjct: 702 QKKEK 706


>gi|148267496|ref|YP_001246439.1| phage major capsid protein, HK97 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150393550|ref|YP_001316225.1| phage major capsid protein HK97 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|147740565|gb|ABQ48863.1| phage major capsid protein, HK97 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|149946002|gb|ABR51938.1| phage major capsid protein HK97 [Staphylococcus aureus subsp.
           aureus JH1]
          Length = 387

 Score = 36.3 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 46/129 (35%), Gaps = 10/129 (7%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G          +   L+ K  DP++  ++ + K L  E+  L         
Sbjct: 6   ELKQSLGMIG-----QQLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 55

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ ++ D     +  +++   +    + +          Y+        E  S +A   +
Sbjct: 56  VERQVQDIEEKEKAKVKDKGEAYQSLSDNEKMVKAKAEFYRHAILPNEFEKPSMEAQRLL 115

Query: 122 HAGAGGTES 130
           HA   G +S
Sbjct: 116 HALPTGNDS 124


>gi|315924549|ref|ZP_07920768.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622079|gb|EFV02041.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 641

 Score = 35.9 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 7/70 (10%), Positives = 23/70 (32%), Gaps = 6/70 (8%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN----AISFI 59
              L  L      +    +++ L +    P  + ++ +   +  +   L       ++  
Sbjct: 574 KNLLKTLEK--KIEACDDKIADLESLMCQPDFYNDIEQVSQITHDYDVLKKESNQLLNQW 631

Query: 60  KEIQDRLCDN 69
           +++   L D 
Sbjct: 632 EDLALDLEDA 641


>gi|319943845|ref|ZP_08018126.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lautropia mirabilis ATCC 51599]
 gi|319743078|gb|EFV95484.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lautropia mirabilis ATCC 51599]
          Length = 675

 Score = 35.9 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 8/59 (13%), Positives = 23/59 (38%), Gaps = 1/59 (1%)

Query: 17  DNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK-EIQDRLCDNLILLE 74
           ++   R + L+ +   P  + +   A    RER  +   +  ++ +  +R  +   +  
Sbjct: 612 ESLQARATTLDEQLAAPDAFADRAAATERQRERAQIATELENLENDWLERQAEIEEIER 670


>gi|297266033|ref|XP_002808087.1| PREDICTED: LOW QUALITY PROTEIN: girdin-like [Macaca mulatta]
          Length = 1960

 Score = 35.9 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 51/165 (30%), Gaps = 11/165 (6%)

Query: 2   KLSRQLNCLGG----LFDWDNAVQRL----SFLNTKT--EDPHLWQNVIEAKMLMRERQH 51
           +L   ++ + G    +   +   QRL      L  +   E   L      +K LM+E+  
Sbjct: 478 ELRTTVDSVEGNASKILKIEKENQRLSKKVEILENEIVQEKQSLQNCQNLSKDLMKEKAQ 537

Query: 52  LDNAISFIKE-IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
           L+  I  ++E  + ++       E   +       +       R+K   +  +       
Sbjct: 538 LEKTIETLRENSERQIKILEQENEHLNQTVSSLRQRSQISAEARVKDIEKENKILHESIK 597

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           E  S  + +E        E + +     R      E    + E  
Sbjct: 598 ETSSKLSKIEFEKRQIKKELEHYKEKGERAEELENELHHLEKENE 642


>gi|256820824|ref|YP_003142103.1| putative ABC transporter ATP-binding protein [Capnocytophaga
           ochracea DSM 7271]
 gi|256582407|gb|ACU93542.1| ABC transporter related [Capnocytophaga ochracea DSM 7271]
          Length = 563

 Score = 35.9 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 5/46 (10%), Positives = 18/46 (39%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             ++  + +N        + +  + + LM ++  L + I  +   +
Sbjct: 103 KLLEEFNHINDLFGLEENYSDPDKMQKLMDKQAELQDKIDALNAWE 148


>gi|29028650|ref|NP_803339.1| SLT orf 37-like protein [Staphylococcus phage phi 12]
 gi|161509679|ref|YP_001575338.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|209363590|ref|YP_002268008.1| putative capsid protein [Staphylococcus phage phi2958PVL]
 gi|257432455|ref|ZP_05608818.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|258420297|ref|ZP_05683244.1| bacteriophage capsid protein [Staphylococcus aureus A9719]
 gi|258448836|ref|ZP_05696946.1| bacteriophage capsid protein [Staphylococcus aureus A6224]
 gi|282919222|ref|ZP_06326957.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           C427]
 gi|294848477|ref|ZP_06789223.1| phage major capsid protein [Staphylococcus aureus A9754]
 gi|295407558|ref|ZP_06817351.1| bacteriophage capsid protein [Staphylococcus aureus A8819]
 gi|297207830|ref|ZP_06924264.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|297246588|ref|ZP_06930421.1| bacteriophage capsid protein [Staphylococcus aureus A8796]
 gi|297591012|ref|ZP_06949650.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           MN8]
 gi|300911916|ref|ZP_07129359.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|18920574|gb|AAL82314.1| SLT orf 37-like protein [Staphylococcus phage phi 12]
 gi|160368488|gb|ABX29459.1| possible bacteriophage capsid protein [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|208973091|dbj|BAG74407.1| putative capsid protein [Staphylococcus phage phi2958PVL]
 gi|257283334|gb|EEV13466.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257843722|gb|EEV68124.1| bacteriophage capsid protein [Staphylococcus aureus A9719]
 gi|257857873|gb|EEV80764.1| bacteriophage capsid protein [Staphylococcus aureus A6224]
 gi|282317032|gb|EFB47406.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           C427]
 gi|294824503|gb|EFG40926.1| phage major capsid protein [Staphylococcus aureus A9754]
 gi|294967577|gb|EFG43613.1| bacteriophage capsid protein [Staphylococcus aureus A8819]
 gi|296887546|gb|EFH26445.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|297176546|gb|EFH35811.1| bacteriophage capsid protein [Staphylococcus aureus A8796]
 gi|297575898|gb|EFH94614.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           MN8]
 gi|300886162|gb|EFK81364.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|302333118|gb|ADL23311.1| putative phage capsid protein [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|320140400|gb|EFW32255.1| phage capsid family protein [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320142756|gb|EFW34559.1| phage capsid family protein [Staphylococcus aureus subsp. aureus
           MRSA177]
          Length = 402

 Score = 35.9 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 46/129 (35%), Gaps = 10/129 (7%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G          +   L+ K  DP++  ++ + K L  E+  L         
Sbjct: 21  ELKQSLGMIG-----QQLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ ++ D     +  +++   +    + +          Y+        E  S +A   +
Sbjct: 71  VERQVQDIEEKEKAKVKDKGEAYQSLSDNEKMVKAKAEFYRHAILPNEFEKPSMEAQRLL 130

Query: 122 HAGAGGTES 130
           HA   G +S
Sbjct: 131 HALPTGNDS 139


>gi|315223978|ref|ZP_07865822.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Capnocytophaga ochracea F0287]
 gi|314946082|gb|EFS98087.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Capnocytophaga ochracea F0287]
          Length = 563

 Score = 35.9 bits (81), Expect = 8.4,   Method: Composition-based stats.
 Identities = 5/46 (10%), Positives = 18/46 (39%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
             ++  + +N        + +  + + LM ++  L + I  +   +
Sbjct: 103 KLLEEFNHINDLFGLEENYSDPDKMQKLMDKQAELQDKIDALNAWE 148


>gi|254670733|emb|CBA06948.1| ABC transporter, ATP-binding protein [Neisseria meningitidis
           alpha153]
          Length = 636

 Score = 35.9 bits (81), Expect = 8.4,   Method: Composition-based stats.
 Identities = 5/57 (8%), Positives = 22/57 (38%), Gaps = 4/57 (7%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLC 67
           +        + +N +  DP ++++  +A  L    + ++      +   + ++ +  
Sbjct: 576 EIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLETKQN 632


>gi|119484150|ref|XP_001261978.1| hypothetical protein NFIA_097030 [Neosartorya fischeri NRRL 181]
 gi|119410134|gb|EAW20081.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181]
          Length = 1143

 Score = 35.9 bits (81), Expect = 8.4,   Method: Composition-based stats.
 Identities = 11/90 (12%), Positives = 28/90 (31%), Gaps = 7/90 (7%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           KL   +N L    +  N  ++   +     +          + L++ +  L+  I+ +K 
Sbjct: 560 KLKNTINELR--MELGNLEEKRKDIEESLAEAE-----KSNQELLQTKSELEGQIAALKT 612

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDN 91
             +   +         +E+    L      
Sbjct: 613 NIEEAREAHEQELERQKEERAEALANQKQE 642


>gi|298693636|gb|ADI96858.1| SLT orf 37-like protein [Staphylococcus aureus subsp. aureus ED133]
          Length = 387

 Score = 35.9 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 47/129 (36%), Gaps = 10/129 (7%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G          +   L+ K  DP++  ++ + K L  E+  L         
Sbjct: 6   ELKQSLGMIG-----QQLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 55

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ ++ D     +  +++   +    +++          Y+        E  S +A   +
Sbjct: 56  VERQVKDIEEKEKAKVKDTGEAYQSLSANEKMVKAKAEFYRHAILPNEFEKPSMEAQRLL 115

Query: 122 HAGAGGTES 130
           HA   G +S
Sbjct: 116 HALPTGNDS 124


>gi|255264657|ref|ZP_05343999.1| holdfast attachment protein C [Thalassiobium sp. R2A62]
 gi|255106992|gb|EET49666.1| holdfast attachment protein C [Thalassiobium sp. R2A62]
          Length = 604

 Score = 35.9 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 9/71 (12%), Positives = 25/71 (35%), Gaps = 9/71 (12%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPH-LWQNVIEAKMLMRERQHLDNAISFIKEI 62
             +L  L  +   +     ++ L T   DP    +  ++ + +       D  +    ++
Sbjct: 535 KHRLQELPSV--IERYEAEIAKLETLMSDPDLFTKEPVKFQKVT------DALVERQSKL 586

Query: 63  QDRLCDNLILL 73
            +   + L+L 
Sbjct: 587 AEAEEEWLMLE 597


>gi|17861384|gb|AAL33802.1| nesprin-2 gamma [Homo sapiens]
          Length = 3270

 Score = 35.9 bits (81), Expect = 8.5,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 46/113 (40%), Gaps = 5/113 (4%)

Query: 16   WDNAVQRLSFLNTKTED--PHLWQNVIEAKMLMRER-QHLDNAISFIKEIQDRLCDN--L 70
                  RL  L  ++ED  P L +++   K L++E  Q L +    +KE+Q    D    
Sbjct: 2204 IKELKSRLQVLKAQSEDPLPELHEDLHNEKELIKELEQSLASWTQNLKELQTMKADLTRH 2263

Query: 71   ILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
            +L+E  +   +             +++ +  ++ E  L+     N+   E+ A
Sbjct: 2264 VLVEDVMVLKEQIEHLHRQWEDLCLRVAIRKQEIEDRLNTWVVFNEKNKELCA 2316


>gi|327405394|ref|YP_004346232.1| ATP-binding cassette protein, ChvD family [Fluviicola taffensis DSM
           16823]
 gi|327320902|gb|AEA45394.1| ATP-binding cassette protein, ChvD family [Fluviicola taffensis DSM
           16823]
          Length = 560

 Score = 35.9 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 52/189 (27%), Gaps = 13/189 (6%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLE 74
           +  + ++    +N    D  +  +  +   L+  +  + + I  +   +        +  
Sbjct: 99  EIVDILKEYEEINASFMDEDVLNDPDKMDKLIARQGVVQDKIDAVDAWELDNKLERAMDA 158

Query: 75  LALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWA 134
           L    DD  I   +    +R+ L     +   +L  +  +N             ES DW 
Sbjct: 159 LRCPPDDQLIETLSGGEKRRVALCRLLLKSPDILLLDEPTNHL---------DAESIDWL 209

Query: 135 NMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRIS 194
              L+ Y             L+      AG        +G    G               
Sbjct: 210 EQHLQQYKGTVIAVTHDRYFLD----NVAGWILELDRGEGIPWKGNYSSWLEQKGERLKG 265

Query: 195 PYDSNSRRH 203
              + S+R 
Sbjct: 266 EEKTESKRQ 274


>gi|308389211|gb|ADO31531.1| putative ABC transporter ATP-binding protein [Neisseria
           meningitidis alpha710]
          Length = 635

 Score = 35.9 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 5/57 (8%), Positives = 22/57 (38%), Gaps = 4/57 (7%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLC 67
           +        + +N +  DP ++++  +A  L    + ++      +   + ++ +  
Sbjct: 575 EIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLETKQN 631


>gi|5051458|emb|CAB44978.1| putative ATP-binding protein [Neisseria meningitidis]
 gi|325142287|gb|EGC64701.1| ABC transporter, ATP-binding protein Uup [Neisseria meningitidis
           961-5945]
 gi|325198260|gb|ADY93716.1| ABC transporter, ATP-binding protein Uup [Neisseria meningitidis
           G2136]
          Length = 636

 Score = 35.9 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 5/57 (8%), Positives = 22/57 (38%), Gaps = 4/57 (7%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLC 67
           +        + +N +  DP ++++  +A  L    + ++      +   + ++ +  
Sbjct: 576 EIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLETKQN 632


>gi|270159507|ref|ZP_06188163.1| putative peptide chain release factor [Legionella longbeachae
           D-4968]
 gi|289165692|ref|YP_003455830.1| unknown proteins [Legionella longbeachae NSW150]
 gi|269987846|gb|EEZ94101.1| putative peptide chain release factor [Legionella longbeachae
           D-4968]
 gi|288858865|emb|CBJ12787.1| putative unknown proteins [Legionella longbeachae NSW150]
          Length = 134

 Score = 35.9 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 24/83 (28%), Positives = 43/83 (51%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
            +++ I+E+D        SG GGQ ++ T S V + H P+G+ ++CQ+ RS+  N+  A 
Sbjct: 14  MMKLSINEADLIEKFILGSGKGGQKLHKTASTVYLKHEPSGLEIKCQESRSREDNRYFAR 73

Query: 278 NMLRAKLYELELQKREEIANIGE 300
             L  KL  +   ++ +     E
Sbjct: 74  VRLCEKLNAILSLEKTQKQQKIE 96


>gi|255012082|ref|ZP_05284208.1| putative ATP-binding component of ABC transporter [Bacteroides
           fragilis 3_1_12]
 gi|313149923|ref|ZP_07812116.1| ABC transporter ATP-binding protein [Bacteroides fragilis 3_1_12]
 gi|313138690|gb|EFR56050.1| ABC transporter ATP-binding protein [Bacteroides fragilis 3_1_12]
          Length = 651

 Score = 35.9 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 10/75 (13%), Positives = 32/75 (42%), Gaps = 5/75 (6%)

Query: 2   KLSRQLNCL-GGLFDWDNAVQR----LSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAI 56
           + ++++  L   + D + A+++    ++ L  K   P    ++   +   + +Q LD+ +
Sbjct: 576 EFNKKIKKLERQVADCEAAIEQTESAIAILEEKMATPDGASDMSLYEQHQKLKQQLDHTV 635

Query: 57  SFIKEIQDRLCDNLI 71
              + +   L +   
Sbjct: 636 EEWERVSMELEEMNE 650


>gi|326681219|ref|XP_003201750.1| PREDICTED: voltage-dependent L-type calcium channel subunit
           alpha-1D, partial [Danio rerio]
          Length = 659

 Score = 35.9 bits (81), Expect = 8.7,   Method: Composition-based stats.
 Identities = 15/123 (12%), Positives = 36/123 (29%), Gaps = 7/123 (5%)

Query: 32  DPHLWQNVIEAK-----MLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQ 86
           D    +   +AK       +RE+Q L+  +    +   +  D     E   +++      
Sbjct: 5   DSEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPDNEEEGDQEAKRNRV 64

Query: 87  ETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAE 146
             +D  +           +S  +  +        V+    G + + +     R   R   
Sbjct: 65  MLADLSRSKSTANSAWFSQSTETQASVPTSENESVNTENPGEDEKIFCGPFCR--WRCWN 122

Query: 147 KRK 149
           +  
Sbjct: 123 RFC 125


>gi|294673435|ref|YP_003574051.1| ABC transporter ATP-binding protein [Prevotella ruminicola 23]
 gi|294472284|gb|ADE81673.1| ABC transporter, ATP-binding protein [Prevotella ruminicola 23]
          Length = 565

 Score = 35.9 bits (81), Expect = 8.7,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 36/103 (34%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           +A+     +N K   P  +++  +   LM+ +  L + I            +  +  L  
Sbjct: 105 DALAEYDEINVKFGLPEYYEDADKMDKLMQRQAELQDIIDATDAWNMDSKLDRAMAALNC 164

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLE 120
              D S+   +    +R+ L     Q   +L  +  +N    E
Sbjct: 165 PPGDWSVKNLSGGERRRVALCRLLLQKPDVLLLDEPTNHLDAE 207


>gi|255016863|ref|ZP_05288989.1| hypothetical protein LmonF_01596 [Listeria monocytogenes FSL
           F2-515]
          Length = 460

 Score = 35.9 bits (81), Expect = 8.7,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 1   MKLSRQL-NCLGGLFD-WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD 53
           ++ S+ + + +  +FD        L  +  +  +P L+ +  + + LM +   L 
Sbjct: 77  LESSKTIWDEMLSVFDSLRKMEADLRKMELRLGEPELYNDPEKYQALMTDYDTLQ 131


>gi|195029889|ref|XP_001987804.1| GH22113 [Drosophila grimshawi]
 gi|193903804|gb|EDW02671.1| GH22113 [Drosophila grimshawi]
          Length = 148

 Score = 35.9 bits (81), Expect = 8.7,   Method: Composition-based stats.
 Identities = 27/77 (35%), Positives = 39/77 (50%)

Query: 221 IEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAWNML 280
             + ESD      R SG GGQ VN T++ V + H+PTG+ V+C   R   KN+ +A  +L
Sbjct: 32  PSLQESDIEETLMRGSGPGGQAVNKTNNCVFLRHLPTGLTVKCHLHRLASKNRIEARKIL 91

Query: 281 RAKLYELELQKREEIAN 297
             KL      ++   A 
Sbjct: 92  LDKLDAHLNGEQSIAAQ 108


>gi|282927350|ref|ZP_06334968.1| phage major capsid protein [Staphylococcus aureus A10102]
 gi|282590674|gb|EFB95750.1| phage major capsid protein [Staphylococcus aureus A10102]
          Length = 402

 Score = 35.9 bits (81), Expect = 8.7,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 46/129 (35%), Gaps = 10/129 (7%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G          +   L+ K  DP++  ++ + K L  E+  L         
Sbjct: 21  ELKQSLGMIG-----QQLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ ++ D     +  +++   +    + +          Y+        E  S +A   +
Sbjct: 71  VERQVQDIEEKEKAKVKDKGEAYQSLSDNEKMVKAKAEFYRHAILPNEFEKPSMEAQRLL 130

Query: 122 HAGAGGTES 130
           HA   G +S
Sbjct: 131 HALPTGNDS 139


>gi|8393030|ref|NP_058994.1| voltage-dependent L-type calcium channel subunit alpha-1D [Rattus
           norvegicus]
 gi|6165987|sp|P27732|CAC1D_RAT RecName: Full=Voltage-dependent L-type calcium channel subunit
           alpha-1D; AltName: Full=Calcium channel, L type, alpha-1
           polypeptide, isoform 2; AltName: Full=Rat brain class D;
           Short=RBD; AltName: Full=Voltage-gated calcium channel
           subunit alpha Cav1.3
 gi|736712|dbj|BAA07282.1| L-type voltage-dependent calcium channel alpha 1 subunit [Rattus
           norvegicus]
          Length = 2203

 Score = 35.9 bits (81), Expect = 8.7,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 31/102 (30%), Gaps = 1/102 (0%)

Query: 42  AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101
            + L RE+Q L+  +    +   +  D     E    E+        +   + +  E   
Sbjct: 422 FQKL-REKQQLEEDLKGYLDWITQAEDIDPENEEEGGEEGKRNTSMPTSETESVNTENVS 480

Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
            + E+     +          A  G +  + W   + +   R
Sbjct: 481 GEGETQGCCGSLWCWWKRRGAAKTGPSGCRRWGQAISKSKLR 522


>gi|325132091|gb|EGC54787.1| ABC transporter, ATP-binding protein Uup [Neisseria meningitidis
           M6190]
 gi|325138024|gb|EGC60597.1| ABC transporter, ATP-binding protein Uup [Neisseria meningitidis
           ES14902]
          Length = 636

 Score = 35.9 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 5/57 (8%), Positives = 22/57 (38%), Gaps = 4/57 (7%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLC 67
           +        + +N +  DP ++++  +A  L    + ++      +   + ++ +  
Sbjct: 576 EIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLETKQN 632


>gi|126658808|ref|ZP_01729952.1| GGDEF domain [Cyanothece sp. CCY0110]
 gi|126619906|gb|EAZ90631.1| GGDEF domain [Cyanothece sp. CCY0110]
          Length = 318

 Score = 35.9 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 38/106 (35%), Gaps = 5/106 (4%)

Query: 40  IEAKMLMRER-QHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLE 98
            + +  ++ER +HL++ +  ++E   +L D   L  L    +               K  
Sbjct: 118 KQLQKALKERNKHLESVVKALEEANKKLEDISRLDALTQISNRLHFNDCLERE---WKRA 174

Query: 99  VEYKQFESLLSGEADSNDAYLEVHAGAGGTES-QDWANMLLRMYTR 143
           +  K+   L+  + D    Y + +    G     D A  L +   R
Sbjct: 175 MREKEPLGLILCDIDDFKRYNDTYGHLQGDRCLHDVAQGLNKAVLR 220


>gi|121634824|ref|YP_975069.1| putative ABC transporter ATP-binding protein [Neisseria
           meningitidis FAM18]
 gi|120866530|emb|CAM10280.1| putative ABC transporter ATP-binding protein [Neisseria
           meningitidis FAM18]
          Length = 641

 Score = 35.9 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 5/57 (8%), Positives = 22/57 (38%), Gaps = 4/57 (7%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLC 67
           +        + +N +  DP ++++  +A  L    + ++      +   + ++ +  
Sbjct: 581 EIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLETKQN 637


>gi|162461543|ref|NP_001105913.1| histidine kinase [Zea mays]
 gi|89242037|dbj|BAE80689.1| histidine kinase [Zea mays]
          Length = 996

 Score = 35.9 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 38/114 (33%), Gaps = 3/114 (2%)

Query: 204 TSFSSIWVYPVVDDSIEIEISESDCRIDT---YRASGAGGQHVNTTDSAVRITHIPTGVV 260
           T+ S+  V    +  +        C +D    +R      ++ N           P+GV 
Sbjct: 284 TNISNPLVMYGSEVPLGNPSPSHICMLDFGDPFRKHHMVCRYRNKPHVPWSAISTPSGVF 343

Query: 261 VQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQIRS 314
           V C             ++ ++    ++E  K++  A     S+       +IR+
Sbjct: 344 VICMLVGYIAGAAWSRYDNVKEDCRKMEELKKQAEAADVAKSQFLATVSHEIRT 397


>gi|218768114|ref|YP_002342626.1| putative ABC transporter ATP-binding protein [Neisseria
           meningitidis Z2491]
 gi|5051450|emb|CAB44971.1| putative ATP-binding protein [Neisseria meningitidis]
 gi|121052122|emb|CAM08438.1| putative ABC transporter ATP-binding protein [Neisseria
           meningitidis Z2491]
 gi|319410355|emb|CBY90706.1| putative ABC transporter ATP-binding protein [Neisseria
           meningitidis WUE 2594]
          Length = 636

 Score = 35.9 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 5/57 (8%), Positives = 22/57 (38%), Gaps = 4/57 (7%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLC 67
           +        + +N +  DP ++++  +A  L    + ++      +   + ++ +  
Sbjct: 576 EIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLETKQN 632


>gi|168698806|ref|ZP_02731083.1| ABC transporter ATP-binding protein [Gemmata obscuriglobus UQM
           2246]
          Length = 641

 Score = 35.9 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 7/58 (12%), Positives = 21/58 (36%), Gaps = 3/58 (5%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLIL 72
           D     Q+++ L    + P ++++    +  M     L+     +  +     + + L
Sbjct: 585 DIAKTEQKVADLEAALQTPDVYKDANRLRETM---SDLEKTKGALALLYQHWEEAVEL 639


>gi|158520013|sp|Q99246|CAC1D_MOUSE RecName: Full=Voltage-dependent L-type calcium channel subunit
           alpha-1D; AltName: Full=Calcium channel, L type, alpha-1
           polypeptide isoform 2; AltName: Full=Voltage-gated
           calcium channel subunit alpha Cav1.3
          Length = 2179

 Score = 35.9 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 13/96 (13%), Positives = 29/96 (30%), Gaps = 1/96 (1%)

Query: 42  AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101
            + L RE+Q L+  +    +   ++ D     E    E+        +   + +  E   
Sbjct: 422 FQKL-REKQQLEEDLKGYLDWITQVEDIDPENEEEGGEEGKRNTSMPTSETESVNTENVS 480

Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
            + E+                A  G +  + W   +
Sbjct: 481 GEGETQGCCGTLWCWWKRRGAAKTGPSGCRRWGQAI 516


>gi|736714|dbj|BAA07283.1| L-type voltage-dependent calcium channel alpha 1 subunit [Rattus
           norvegicus]
          Length = 1668

 Score = 35.9 bits (81), Expect = 8.8,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 31/102 (30%), Gaps = 1/102 (0%)

Query: 42  AKMLMRERQHLDNAISFIKEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEY 101
            + L RE+Q L+  +    +   +  D     E    E+        +   + +  E   
Sbjct: 422 FQKL-REKQQLEEDLKGYLDWITQAEDIDPENEEEGGEEGKRNTSMPTSETESVNTENVS 480

Query: 102 KQFESLLSGEADSNDAYLEVHAGAGGTESQDWANMLLRMYTR 143
            + E+     +          A  G +  + W   + +   R
Sbjct: 481 GEGETQGCCGSLWCWWKRRGAAKTGPSGCRRWGQAISKSKLR 522


>gi|241758790|ref|ZP_04756903.1| ABC transporter ATP-binding protein uup [Neisseria flavescens
           SK114]
 gi|241320998|gb|EER57211.1| ABC transporter ATP-binding protein uup [Neisseria flavescens
           SK114]
          Length = 635

 Score = 35.9 bits (81), Expect = 8.9,   Method: Composition-based stats.
 Identities = 5/50 (10%), Positives = 22/50 (44%), Gaps = 1/50 (2%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD-NAISFIKEIQ 63
           +        + +N +  DP ++++  +A  L    + ++ + +  ++  +
Sbjct: 575 EIAALETEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMSLLEKLERWE 624


>gi|329965393|ref|ZP_08302317.1| ATP-binding cassette protein, ChvD family [Bacteroides fluxus YIT
           12057]
 gi|328522185|gb|EGF49299.1| ATP-binding cassette protein, ChvD family [Bacteroides fluxus YIT
           12057]
          Length = 565

 Score = 35.9 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 55/187 (29%), Gaps = 12/187 (6%)

Query: 18  NAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILLELAL 77
           +A+     +N K   P  +++  +   L   +  L + I               +  L  
Sbjct: 105 DALAEYEEINQKFGLPEYYEDQDKMDKLFSRQAELQDIIDATDAWNLDSKLERAMDALRC 164

Query: 78  EEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDWANML 137
             +D S+   +    +R+ L     Q   +L  +  +N             ES DW    
Sbjct: 165 PPEDQSVEHLSGGERRRVALCRLLLQKPDVLLLDEPTNHL---------DAESIDWLEQH 215

Query: 138 LRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRISPYD 197
           L+ Y             L+   G    +         P    +    +   + + +    
Sbjct: 216 LQQYEGTVIAVTHDRYFLDHVAGWILELDRGEG---IPWKGNYSSWLEQKTKRMEMEEKT 272

Query: 198 SNSRRHT 204
           ++ RR T
Sbjct: 273 ASKRRKT 279


>gi|291386767|ref|XP_002709908.1| PREDICTED: coiled-coil domain containing 88A [Oryctolagus
           cuniculus]
          Length = 1871

 Score = 35.9 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 50/165 (30%), Gaps = 11/165 (6%)

Query: 2   KLSRQLNCLGG----LFDWDNAVQRL----SFLNTKT--EDPHLWQNVIEAKMLMRERQH 51
           +L   +  + G    +   +   QRL      L  +   E   L      +K LM+E+  
Sbjct: 478 ELRSSMESVEGNTSKILKIEKENQRLSRKVEMLENEIIQEKQSLQNCQNLSKDLMKEKAQ 537

Query: 52  LDNAISFIKE-IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSG 110
           L+  I  ++E  + ++       E   +       +       R+K   +  +       
Sbjct: 538 LEKTIETLRENSERQIKMLEQENEHLNQTVSSLRQRSQISAEARVKDIEKENKILHESIK 597

Query: 111 EADSNDAYLEVHAGAGGTESQDWANMLLRMYTRWAEKRKFKTEAL 155
           E  S  + +E        E + +     R      E    + E  
Sbjct: 598 ETSSKLSKIEFEKRQIRKELEHYKEKGERAEELENELHHLEKENE 642


>gi|45657623|ref|YP_001709.1| peptide chain release factor 2-like protein [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
 gi|45600863|gb|AAS70346.1| peptide chain release factor 2-like protein [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
          Length = 155

 Score = 35.9 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 4/92 (4%)

Query: 218 SIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQQERSQHKNKAQAW 277
              ++I E++      R+ G GGQ+VN   +AV + H PTG+ V+C   R+Q  N+ +A 
Sbjct: 19  MEILQIKETELEESFTRSGGKGGQNVNKVSTAVHLRHKPTGIEVKCSLYRTQGLNRYKAR 78

Query: 278 NMLRAKLYELELQKR----EEIANIGESSKTE 305
            +L  K+ +   +      E+   +  + + +
Sbjct: 79  AILCEKIQDFNHKNLGIISEDQKKLIRNKQKD 110


>gi|53713702|ref|YP_099694.1| DNA gyrase A subunit [Bacteroides fragilis YCH46]
 gi|60681973|ref|YP_212117.1| DNA gyrase A subunit [Bacteroides fragilis NCTC 9343]
 gi|253565650|ref|ZP_04843105.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|265764026|ref|ZP_06092594.1| DNA gyrase, A subunit [Bacteroides sp. 2_1_16]
 gi|52216567|dbj|BAD49160.1| DNA gyrase A subunit [Bacteroides fragilis YCH46]
 gi|60493407|emb|CAH08193.1| DNA gyrase A subunit [Bacteroides fragilis NCTC 9343]
 gi|251945929|gb|EES86336.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|263256634|gb|EEZ27980.1| DNA gyrase, A subunit [Bacteroides sp. 2_1_16]
 gi|301163411|emb|CBW22962.1| DNA gyrase A subunit [Bacteroides fragilis 638R]
          Length = 845

 Score = 35.9 bits (81), Expect = 9.1,   Method: Composition-based stats.
 Identities = 20/240 (8%), Positives = 64/240 (26%), Gaps = 5/240 (2%)

Query: 7   LNCLGGLFDWDNAVQRLSFLNTKTED-PHLWQNV--IEAKMLMRERQHLDNAISFIKEIQ 63
           ++ L   F+      R + +  +      L Q+    E + +M++  +L++ ++  +  +
Sbjct: 404 ISGLMERFNLSEIQAR-AIVEMRLRQLTGLMQDQLHAEYEEVMKQIAYLESILADDEVCR 462

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
             + D L+ +     ++  S +  +S+         + +   ++            E  A
Sbjct: 463 KVIKDELLEVRAKYGDERRSEIVYSSEEFNPEDFYADDQMIITISHMGYIKRTPLTEFRA 522

Query: 124 GAGGTESQDWANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKG 183
              G             +             +      +         I         + 
Sbjct: 523 QNRGGVGSKGTETRDEDFVEHIYPATMHNTMMFFTQKGKC-YWLKVYEIPEGTKNSKGRA 581

Query: 184 EQGVHRLVRISPYDSNSRRHTSFSSIWVYPVVDDSIEIEISESDCRIDTYRASGAGGQHV 243
            Q +  +      ++  R  +     ++                  ++ Y      G + 
Sbjct: 582 IQNLLNIDSDDAVNAYLRVKSLNDQEYINSHYVLFCTKNGVIKKTSLEQYSRPRQNGVNA 641


>gi|282911086|ref|ZP_06318888.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282324781|gb|EFB55091.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|312438084|gb|ADQ77155.1| bacteriophage capsid protein [Staphylococcus aureus subsp. aureus
           TCH60]
          Length = 402

 Score = 35.9 bits (81), Expect = 9.2,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 45/129 (34%), Gaps = 10/129 (7%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G          +   L+ K  DP++  ++   K L  E+  L         
Sbjct: 21  ELKQSLGMIG-----QQLKNKNDELSQKATDPNI--DMEYIKQLETEKAGLQ---QRFNI 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ ++ D     +  +++   +    + +          Y+        E  S +A   +
Sbjct: 71  VERQVQDIEEKEKAKVKDKGEAYQSLSDNEKMVKAKAEFYRHAILPNEFEKPSMEAQRLL 130

Query: 122 HAGAGGTES 130
           HA   G +S
Sbjct: 131 HALPTGNDS 139


>gi|304405167|ref|ZP_07386827.1| ABC transporter related protein [Paenibacillus curdlanolyticus YK9]
 gi|304346046|gb|EFM11880.1| ABC transporter related protein [Paenibacillus curdlanolyticus YK9]
          Length = 645

 Score = 35.9 bits (81), Expect = 9.4,   Method: Composition-based stats.
 Identities = 8/63 (12%), Positives = 23/63 (36%), Gaps = 6/63 (9%)

Query: 4   SRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKML----MRERQHLDNAISFI 59
            R+L  L G  +     + ++ L     DP ++ + +  + +      ++  L       
Sbjct: 583 QRKLEQLEG--EIARLEEEIAALELALTDPSVFNDYVRIQSIQGDVASKKAELAAVYEQW 640

Query: 60  KEI 62
           + +
Sbjct: 641 EGL 643


>gi|120436643|ref|YP_862329.1| putative ABC transporter ATP-binding protein [Gramella forsetii
           KT0803]
 gi|117578793|emb|CAL67262.1| ABC-type transporter ATP-binding protein [Gramella forsetii KT0803]
          Length = 563

 Score = 35.9 bits (81), Expect = 9.4,   Method: Composition-based stats.
 Identities = 6/45 (13%), Positives = 19/45 (42%)

Query: 19  AVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
            +   + +N     P ++++  + + LM ++  L + I      +
Sbjct: 104 ILDEYNKINDMFGLPEVYEDADKMQKLMDKQAELQDKIDASNAWE 148


>gi|254804931|ref|YP_003083152.1| ABC transporter ATP-binding protein [Neisseria meningitidis
           alpha14]
 gi|254668473|emb|CBA05763.1| ABC transporter ATP-binding protein [Neisseria meningitidis
           alpha14]
          Length = 636

 Score = 35.9 bits (81), Expect = 9.5,   Method: Composition-based stats.
 Identities = 5/57 (8%), Positives = 22/57 (38%), Gaps = 4/57 (7%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLD----NAISFIKEIQDRLC 67
           +        + +N +  DP ++++  +A  L    + ++      +   + ++ +  
Sbjct: 576 EIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERWELLETKQN 632


>gi|229097020|ref|ZP_04227988.1| hypothetical protein bcere0020_22660 [Bacillus cereus Rock3-29]
 gi|228686416|gb|EEL40326.1| hypothetical protein bcere0020_22660 [Bacillus cereus Rock3-29]
          Length = 561

 Score = 35.9 bits (81), Expect = 9.6,   Method: Composition-based stats.
 Identities = 17/148 (11%), Positives = 46/148 (31%), Gaps = 9/148 (6%)

Query: 1   MKLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFI- 59
           ++L  +   L    D     +++  L+             + K   +E   L N I  + 
Sbjct: 183 VELKTRQKSLKN--DLREIDKKIKTLDIVESMDDFV---RKYKQYRKEYSDLQNEIYELE 237

Query: 60  ---KEIQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSND 116
              K+ +  + + +  +E   + +D     +   +    K+     + +       ++  
Sbjct: 238 FIKKQYEKNIENLIEKVEQIKKFNDVEQFYKQLIDYFPNKISKSKDEVQDFYEFMVENRG 297

Query: 117 AYLEVHAGAGGTESQDWANMLLRMYTRW 144
           AY  +       E ++    L     + 
Sbjct: 298 AYFTLRIKETIMEIKELKKKLQNTKFKL 325


>gi|255531025|ref|YP_003091397.1| ABC transporter ATP-binding protein [Pedobacter heparinus DSM 2366]
 gi|255344009|gb|ACU03335.1| ABC transporter related [Pedobacter heparinus DSM 2366]
          Length = 558

 Score = 35.9 bits (81), Expect = 9.6,   Method: Composition-based stats.
 Identities = 6/53 (11%), Positives = 18/53 (33%)

Query: 11  GGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQ 63
            G+ +    ++    +N        + +  +   LM  +  L + I  +   +
Sbjct: 93  EGVAEITAILKEYEEVNEAFGLEENYSDPDKMDKLMARQGELQDKIDAVNAWE 145


>gi|323442647|gb|EGB00275.1| phiSLT ORF387-like protein, putative phage capsid protein
           [Staphylococcus aureus O46]
          Length = 402

 Score = 35.9 bits (81), Expect = 9.7,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 47/129 (36%), Gaps = 10/129 (7%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKE 61
           +L + L  +G          +   L+ K  DP++  ++ + K L  E+  L         
Sbjct: 21  ELKQSLGMIG-----QQLKNKNDELSQKATDPNI--DMEDIKQLETEKAGLQ---QRFNI 70

Query: 62  IQDRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEV 121
           ++ ++ D     +  +++   +    +++          Y+        E  S +A   +
Sbjct: 71  VERQVKDIEEKEKAKVKDTGEAYQSLSANEKMVKAKAEFYRHAILPNEFEKPSMEAQRLL 130

Query: 122 HAGAGGTES 130
           HA   G +S
Sbjct: 131 HALPTGNDS 139


>gi|294648697|ref|ZP_06726157.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Acinetobacter haemolyticus ATCC 19194]
 gi|292825372|gb|EFF84115.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Acinetobacter haemolyticus ATCC 19194]
          Length = 642

 Score = 35.9 bits (81), Expect = 9.7,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 25/74 (33%), Gaps = 5/74 (6%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLMRERQHLDNAISFIK 60
           L + +  +      +    RL  +     D  L+      +   LM E+  L N +   +
Sbjct: 566 LRKNIEKVEA--QIEKIQPRLVDIEHALADSALYEANRKDDLIKLMNEQSELKNKLEQYE 623

Query: 61  E-IQDRLCDNLILL 73
           E +   + +   L 
Sbjct: 624 EQLLTFMMELEELE 637


>gi|226952835|ref|ZP_03823299.1| ABC transporter ATP-binding protein [Acinetobacter sp. ATCC 27244]
 gi|226836456|gb|EEH68839.1| ABC transporter ATP-binding protein [Acinetobacter sp. ATCC 27244]
          Length = 642

 Score = 35.9 bits (81), Expect = 9.7,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 25/74 (33%), Gaps = 5/74 (6%)

Query: 3   LSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLW--QNVIEAKMLMRERQHLDNAISFIK 60
           L + +  +      +    RL  +     D  L+      +   LM E+  L N +   +
Sbjct: 566 LRKNIEKVEA--QIEKIQPRLVDIEHALADSALYEANRKDDLIKLMNEQSELKNKLEQYE 623

Query: 61  E-IQDRLCDNLILL 73
           E +   + +   L 
Sbjct: 624 EQLLTFMMELEELE 637


>gi|270296241|ref|ZP_06202441.1| ATP-dependent chaperone ClpB [Bacteroides sp. D20]
 gi|270273645|gb|EFA19507.1| ATP-dependent chaperone ClpB [Bacteroides sp. D20]
          Length = 864

 Score = 35.9 bits (81), Expect = 9.8,   Method: Composition-based stats.
 Identities = 14/133 (10%), Positives = 38/133 (28%), Gaps = 12/133 (9%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIK-----------EIQ 63
           + D   +++  L  + E      +  + + + +E   L    +  K           +IQ
Sbjct: 409 ELDEISRKIKQLEIEREAIKRENDKPKLEQIGKELAELKEQENSYKAKWQSEKTLVNKIQ 468

Query: 64  DRLCDNLILLELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHA 123
               +   L   A + +           ++  KL+   ++ E       +       +  
Sbjct: 469 QNKVEIENLKFEADKAEREGDYG-RVAEIRYGKLQALNQEIEETQQKLHEMQGDKAMIKE 527

Query: 124 GAGGTESQDWANM 136
                +  D  + 
Sbjct: 528 EVDAEDIADVVSR 540


>gi|153853246|ref|ZP_01994655.1| hypothetical protein DORLON_00640 [Dorea longicatena DSM 13814]
 gi|149754032|gb|EDM63963.1| hypothetical protein DORLON_00640 [Dorea longicatena DSM 13814]
          Length = 644

 Score = 35.9 bits (81), Expect = 9.8,   Method: Composition-based stats.
 Identities = 8/69 (11%), Positives = 25/69 (36%), Gaps = 7/69 (10%)

Query: 2   KLSRQLNCLGGLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHL-DNAISFIK 60
           +L +    +G          R S ++       ++ N ++ + L +E+  + +       
Sbjct: 582 ELKKTEERIG------ELEDRDSEIDALMIQEDIFTNSVKCQELAKEKAAIAEELEELYM 635

Query: 61  EIQDRLCDN 69
           + ++   D 
Sbjct: 636 KWEELAEDA 644


>gi|261405688|ref|YP_003241929.1| ABC transporter-like protein [Paenibacillus sp. Y412MC10]
 gi|261282151|gb|ACX64122.1| ABC transporter related protein [Paenibacillus sp. Y412MC10]
          Length = 653

 Score = 35.9 bits (81), Expect = 9.9,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 14/43 (32%)

Query: 12  GLFDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDN 54
           GL         ++ L  +  DP +  N      ++R    L  
Sbjct: 90  GLIHLKEYRAEMTELEKRMSDPGIAGNAELLDRVLRRYSALQE 132


>gi|319400709|gb|EFV88931.1| ABC transporter family protein [Staphylococcus epidermidis FRI909]
          Length = 644

 Score = 35.9 bits (81), Expect = 9.9,   Method: Composition-based stats.
 Identities = 6/55 (10%), Positives = 24/55 (43%), Gaps = 4/55 (7%)

Query: 16  WDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQH----LDNAISFIKEIQDRL 66
            +     +S +  +   P ++ + ++A     ++      L+  +   +++Q++L
Sbjct: 590 IEELESAISHIEEQLTQPEVFNDPLKASKFANQKSETEQKLEQIMLEWEKLQEKL 644


>gi|311693117|gb|ADP95990.1| ABC transporter ATP-binding protein-like protein [marine bacterium
           HP15]
          Length = 647

 Score = 35.9 bits (81), Expect = 9.9,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 6/47 (12%)

Query: 15  DWDNAVQRLSFLNTKTEDPHLWQN--VIEAKMLMRER----QHLDNA 55
           + D   Q+LS L  +  DP L+ +      K L+ E+      L+  
Sbjct: 581 EMDQLQQKLSALEEQLSDPDLYDDSGKTRLKELLAEQATATARLEEV 627


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.316    0.123    0.333 

Lambda     K      H
   0.267   0.0374    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,365,920,070
Number of Sequences: 14124377
Number of extensions: 123783109
Number of successful extensions: 646771
Number of sequences better than 10.0: 7770
Number of HSP's better than 10.0 without gapping: 5291
Number of HSP's successfully gapped in prelim test: 2479
Number of HSP's that attempted gapping in prelim test: 620512
Number of HSP's gapped (non-prelim): 15220
length of query: 355
length of database: 4,842,793,630
effective HSP length: 140
effective length of query: 215
effective length of database: 2,865,380,850
effective search space: 616056882750
effective search space used: 616056882750
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 81 (35.9 bits)